isoform	chrom	strand	length	exons	structural_category	associated_gene	associated_transcript	ref_length	ref_exons	diff_to_TSS	diff_to_TTS	diff_to_gene_TSS	diff_to_gene_TTS	subcategory	RTS_stage	all_canonical	min_sample_cov	min_cov	min_cov_pos	sd_cov	FL	n_indels	n_indels_junc	bite	iso_exp	gene_exp	ratio_exp	FSM_class	coding	ORF_length	CDS_length	CDS_start	CDS_end	CDS_genomic_start	CDS_genomic_end	predicted_NMD	perc_A_downstream_TTS	seq_A_downstream_TTS	dist_to_cage_peak	within_cage_peak	pos_cage_peak	dist_to_polya_site	within_polya_site	polyA_motif	polyA_dist	ORF_seq	TSS_genomic_coord	TTS_genomic_coord	experiment_id	entry_id	LRGASP_id
transcript_1.known	ERCC-00002	+	1045	1	FSM	ERCC-00002A	DQ459430	1045	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10352	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1045	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00002_+_0_1000
transcript_10.known	ERCC-00034	+	1003	1	FSM	ERCC-00034A	DQ855001	1003	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1003	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00034_+_0_1000
transcript_100.known	SIRV2	-	740	3	FSM	SIRV2A	SIRV204	740	3	0	0	0	0	multi-exon	FALSE	canonical	3	2745	junction_1	217	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTTATCCTATATCGGA	NA	False	NA	NA	False	NA	NA	NA	4732	3643	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV2_-_3826_3966_4480_4687
transcript_100015.known	chr19	-	2307	8	FSM	ENSG00000133250.14	ENST00000393927.9	2307	8	0	0	0	0	multi-exon	TRUE	canonical	3	210	junction_1	38.1500795730307	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCGTAACCAGGAGAGGTG	-8509035	True	NA	NA	False	AATAAA	-17	NA	8514167	8509677	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_8510765_8510850_8511025_8511485_8511537_8511616_8511961_8512386_8512493_8512603_8512712_8513028_8513342_8514043
transcript_100019.known	chr19	-	1178	6	FSM	ENSG00000133250.14	ENST00000255616.8	1178	6	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_1	7.41350119714026	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGCACCTGCGCCTTC	-8509016	True	NA	0	True	AATACA	-19	NA	8514148	8511334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_8511537_8511616_8511961_8512386_8512493_8512603_8512712_8513028_8513342_8514043
transcript_100026.known	chr19	-	4296	29	FSM	ENSG00000142347.19	ENST00000613525.4	4296	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	4.73843920742358	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAAAAAAAAG	NA	False	NA	NA	False	ACTAAA	-6	NA	8577577	8520796	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_8521605_8522376_8522547_8522633_8522830_8525478_8525563_8526452_8526602_8526788_8526936_8527337_8527484_8530195_8530366_8530458_8530574_8536251_8536397_8536498_8536598_8536948_8537056_8539946_8540029_8541905_8541992_8544296_8544465_8545649_8545737_8548035_8548123_8548236_8548318_8549594_8549601_8550165_8550357_8550561_8550695_8551739_8551875_8552032_8552165_8553138_8553229_8553349_8553438_8554476_8554572_8554653_8554744_8555658_8555797_8577306
transcript_100027.known	chr19	-	4180	28	FSM	ENSG00000142347.19	ENST00000644032.2	4180	28	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	4.17057429933607	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGGGTGTGGTGGTGCCTG	-8577269	True	NA	NA	False	AAAAAG	-13	NA	8577442	8520777	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_8521605_8522376_8522547_8522633_8522830_8525478_8525563_8526452_8526602_8526788_8526936_8527337_8527484_8530195_8530366_8530458_8530574_8536251_8536397_8536498_8536598_8536948_8537056_8539946_8540029_8541905_8541992_8544296_8544465_8545649_8545737_8548035_8548123_8548236_8548318_8550159_8550357_8550561_8550695_8551739_8551875_8552032_8552165_8553138_8553229_8553349_8553438_8554476_8554572_8554653_8554744_8555658_8555797_8577306
transcript_100034.known	chr19	-	2458	13	FSM	ENSG00000142303.14	ENST00000595838.5	2458	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	6.03232035695129	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGCGGTGTGTGTGTGTC	-8592094	True	NA	-2	True	AATAAA	-26	NA	8592196	8580241	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_8581003_8584894_8585055_8585131_8585309_8585455_8585661_8586121_8586252_8586343_8586471_8586557_8586722_8586815_8586897_8589241_8589366_8589451_8589575_8589888_8589992_8591799_8591864_8591957
transcript_100057.nnic	chr19	+	3979	8	NNC	ENSG00000130803.15	novel	4056	7	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_7	53.1436251864622	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGATATTTCATTGTTTT	9137183	True	NA	10	True	AATAAA	-23	NA	9140379	9163413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_9140593_9155924_9156042_9156611_9156749_9157267_9157395_9157979_9158076_9158825_9158909_9160113_9162961_9163054
transcript_100060.known	chr19	+	4186	7	FSM	ENSG00000130803.15	ENST00000591278.5	4186	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	64.4403255388701	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATATTTCATTGTTTTTC	9137218	True	NA	12	True	AATAAA	-25	NA	9140414	9163415	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9140593_9155924_9156042_9156611_9156749_9157267_9157395_9157833_9158076_9158825_9158909_9160113
transcript_100061.known	chr19	+	4056	7	FSM	ENSG00000130803.15	ENST00000247956.11	4056	7	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_3	19.5056971734471	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGATATTTCATTGTTTT	9137200	True	NA	10	True	AATAAA	-23	NA	9140396	9163413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9140593_9155924_9156042_9156611_9156749_9157267_9157395_9157979_9158076_9158825_9158909_9160113
transcript_100064.known	chr19	+	3955	6	FSM	ENSG00000130803.15	ENST00000360385.7	3955	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	56.1875431034317	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTATGGATATTTCATT	9137200	True	NA	5	True	AATAAA	-18	NA	9140396	9163408	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9140593_9155924_9156042_9156611_9156749_9157267_9157395_9158825_9158909_9160113
transcript_100065.nic	chr19	+	4592	6	NIC	ENSG00000130803.15	novel	4056	7	NA	NA	-17	0	intron_retention	FALSE	canonical	3	153	junction_4	14.0655607780138	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGATATTTCATTGTTTT	9137183	True	NA	10	True	AATAAA	-23	NA	9140379	9163413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_9140593_9155924_9156042_9156611_9157395_9157979_9158076_9158825_9158909_9160113
transcript_10007.known	chr1	+	5274	27	FSM	ENSG00000158966.16	ENST00000290039.6	5274	27	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_9	32.5182697851913	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTGGCTACAGTGATTTG	64470782	False	NA	25	True	AATAAA	-20	NA	64470792	64693058	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_64470943_64550593_64550657_64582155_64582305_64602805_64602913_64629354_64629482_64632598_64632744_64634043_64634261_64641819_64641970_64647800_64648035_64652160_64652311_64653757_64653882_64654685_64654804_64658704_64658874_64663694_64663838_64664497_64664680_64666056_64666168_64671563_64671687_64673157_64673258_64673347_64673465_64675400_64675562_64675896_64675984_64676894_64677012_64678158_64678311_64679594_64679757_64681257_64681336_64682004_64682107_64691322
transcript_100076.known	chr19	+	4675	7	FSM	ENSG00000188321.14	ENST00000603380.6	4675	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	16.6332999331662	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAATACACTTCCCAATT	9323163	True	NA	NA	False	AATAAA	-24	NA	9324178	9345871	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9324229_9324694_9324781_9337795_9337859_9338493_9338583_9339192_9339320_9341101_9341185_9341694
transcript_100078.known	chr19	+	1488	7	FSM	ENSG00000188321.14	ENST00000592896.5	1488	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	19.1956302897879	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCTTATAAAACACAGGCG	9323181	True	NA	NA	False	NA	NA	NA	9324196	9342465	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9324229_9324694_9324781_9337795_9338018_9338493_9338583_9339192_9339320_9341101_9341185_9341616
transcript_100083.known	chr19	+	967	6	FSM	ENSG00000188321.14	ENST00000585352.5	967	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	17.6589920437153	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACTCAAGATGGAGAAAAA	9323163	True	NA	NA	False	NA	NA	NA	9324178	9342148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9324229_9324694_9324781_9338493_9338583_9339192_9339320_9341101_9341185_9341616
transcript_100084.known	chr19	+	2991	6	FSM	ENSG00000188321.14	ENST00000587557.5	2991	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	18.6182705963792	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATCCTGAGTTATCTCAA	9323760	False	NA	4	True	AATAAA	-18	NA	9323771	9343843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9324229_9324694_9324781_9338493_9338583_9339192_9339320_9341101_9341185_9341694
transcript_100090.known	chr19	+	2732	7	FSM	ENSG00000188321.14	ENST00000317221.11	2732	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	20.2381652659853	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATCCTGAGTTATCTCAA	9323163	True	NA	4	True	AATAAA	-18	NA	9324178	9343843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9324229_9324694_9324781_9337795_9337866_9338493_9338583_9339192_9339320_9341101_9341185_9341616
transcript_100097.known	chr19	-	3653	12	FSM	ENSG00000174652.20	ENST00000651268.1	3653	12	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_5	20.4910784860305	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTTGGTTAAATCATTCA	-9433708	True	NA	-19	True	AATAAA	-3	NA	9435571	9412610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9414721_9415653_9415743_9417827_9417909_9418504_9418632_9418765_9418896_9419050_9419300_9420064_9420219_9433667_9433784_9434074_9434236_9434797_9434860_9435107_9435194_9435283
transcript_100101.known	chr19	-	3544	11	FSM	ENSG00000174652.20	ENST00000592904.7	3544	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	15.1726728034318	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCCGTTCATTAGCTA	-9433710	True	NA	-12	True	AATAAA	-16	NA	9435573	9412428	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9414721_9415653_9415743_9417827_9417909_9418504_9418632_9419216_9419300_9420064_9420219_9433667_9433787_9434074_9434236_9434797_9434860_9435107_9435194_9435283
transcript_100103.known	chr19	-	3293	11	FSM	ENSG00000174652.20	ENST00000588933.5	3293	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	21.5278888886022	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCAGTCTGTTATTTTG	-9433441	False	NA	-6	True	AATAAA	-16	NA	9435304	9412597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9414721_9415653_9415743_9417827_9417909_9418504_9418632_9418765_9418896_9419050_9419300_9420064_9420219_9434064_9434236_9434797_9434860_9435107_9435194_9435283
transcript_100117.nic	chr19	-	3114	9	NIC	ENSG00000174652.20	novel	3503	9	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_6	16.343481116335	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCAGTCTGTTATTTTG	-9433729	True	NA	-6	True	AATAAA	-16	NA	9435592	9412597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_9414721_9415653_9415743_9417827_9417909_9418504_9418632_9419216_9419300_9420064_9420219_9434797_9434860_9435107_9435194_9435283
transcript_100121.known	chr19	-	2815	10	FSM	ENSG00000198028.4	ENST00000301480.5	2815	10	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_5	7.25888132047159	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTGATGAGTC	-9498020	True	NA	NA	False	AAAACA	-20	NA	9498616	9466354	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9468335_9469104_9469188_9469629_9469711_9470391_9470519_9471295_9471379_9473178_9473260_9474198_9474326_9475283_9475370_9498127_9498216_9498537
transcript_100123.nnic	chr19	-	3633	9	NNC	ENSG00000130818.12	novel	7104	8	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.5758369027902	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAATGTGTGGGGTTCCTT	-9536323	True	NA	-3	True	AATAAA	-19	NA	9538648	9523222	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_9524671_9528144_9529637_9530984_9531068_9532844_9532926_9533839_9533967_9535187_9535280_9536207_9536357_9538258_9538346_9538574
transcript_100128.known	chr19	-	7104	8	FSM	ENSG00000130818.12	ENST00000253115.7	7104	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_7	8.17162836918577	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAATGTGTGGGGTTCCTT	-9536320	True	NA	-3	True	AATAAA	-19	NA	9538645	9523222	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9529637_9530984_9531068_9532844_9532926_9533839_9533967_9535187_9535280_9536207_9536357_9538258_9538346_9538574
transcript_100132.nic	chr19	-	2549	7	ISM	ENSG00000130818.12	ENST00000253115.7	7104	8	0	4784	0	0	intron_retention	FALSE	canonical	3	24	junction_6	3.590109871423	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	-9536320	True	NA	NA	False	NA	NA	NA	9538645	9528006	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_9529637_9530984_9531068_9532844_9532926_9533839_9533967_9535187_9535280_9536207_9536357_9538258
transcript_100134.known	chr19	-	919	6	FSM	ENSG00000130818.12	ENST00000589289.1	919	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12.2898331965898	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTACGAATGGAGGAAT	-9536063	False	NA	NA	False	NA	NA	NA	9538388	9529296	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9529637_9532844_9532926_9533839_9533967_9535187_9535280_9536207_9536357_9538258
transcript_100135.known	chr19	-	2402	6	FSM	ENSG00000130818.12	ENST00000593003.5	2402	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	10.283968105746	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	-9536265	True	NA	NA	False	NA	NA	NA	9538590	9528006	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9529637_9530984_9531068_9532844_9532926_9533839_9533967_9536207_9536357_9538258
transcript_100143.nnic	chr19	-	3828	5	NNC	ENSG00000197961.12	novel	6987	4	NA	NA	-29	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	32.897568299192	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTTACTTGGGTCAATTT	-9576676	True	NA	-15	True	AATAAA	-14	NA	9584533	9560331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_9562355_9565539_9567110_9568094_9568176_9569001_9569083_9584460
transcript_100148.known	chr19	-	6987	4	FSM	ENSG00000197961.12	ENST00000320451.7	6987	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	13.0724477007517	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTTGGGTCAATTTTGT	-9576647	True	NA	-12	True	AATAAA	-17	NA	9584504	9560328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9567110_9568094_9568176_9569001_9569083_9584460
transcript_10016.known	chr1	-	4930	25	FSM	ENSG00000162434.13	ENST00000673254.1	4930	25	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_19	30.816408643232	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCTTTATACAAATAAATAT	-64964786	True	NA	-38	True	NA	NA	NA	64966552	64833261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_64834658_64835395_64835507_64836097_64836216_64837931_64838105_64838464_64838590_64839602_64839796_64841244_64841340_64841450_64841602_64844063_64844216_64844753_64844890_64845512_64845641_64846648_64846737_64847531_64847676_64850803_64850911_64855508_64855699_64857655_64857780_64860104_64860263_64864786_64864973_64866865_64867077_64869310_64869475_64873369_64873524_64879024_64879149_64883276_64883476_64886258_64886342_64966332
transcript_100167.known	chr19	-	880	6	FSM	ENSG00000171469.11	ENST00000495503.5	880	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	44.2113107699828	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTGTAGCAGTTCATACA	-9618621	True	NA	NA	False	NA	NA	NA	9621195	9610936	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9611337_9614020_9614104_9617048_9617172_9618090_9618180_9619431_9619583_9621161
transcript_10017.known	chr1	-	5092	25	FSM	ENSG00000162434.13	ENST00000342505.5	5092	25	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_7	12.7243751210903	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCATATGCCTTTTAATA	-64964783	True	NA	-5	True	AATAAA	-17	NA	64966549	64833228	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_64834658_64835395_64835507_64836097_64836216_64837931_64838105_64838464_64838590_64839602_64839796_64841244_64841340_64841450_64841602_64844063_64844216_64844753_64844890_64845512_64845641_64846648_64846737_64847531_64847676_64850803_64850911_64855508_64855699_64857655_64857780_64860104_64860263_64864786_64864973_64866865_64867209_64869310_64869475_64873369_64873524_64879024_64879149_64883276_64883476_64886258_64886342_64966332
transcript_100177.known	chr19	-	4419	5	FSM	ENSG00000171469.11	ENST00000424629.5	4419	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	51.4119392748416	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTGATGCATGTCTATA	-9618634	True	NA	-7	True	AATAAA	-17	NA	9621208	9607325	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9611337_9614020_9614104_9617044_9617172_9619431_9619583_9621161
transcript_100179.known	chr19	-	625	5	FSM	ENSG00000171469.11	ENST00000465974.5	625	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	45.5247185603601	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACATCTTGAAGTTCTCAA	-9618658	True	NA	NA	False	NA	NA	NA	9621232	9611105	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9611337_9614020_9614104_9618090_9618180_9619431_9619583_9621161
transcript_100187.known	chr19	-	326	3	FSM	ENSG00000171469.11	ENST00000485150.1	326	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	8.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATATGCTTTCATCCAAT	-9618645	True	NA	NA	False	NA	NA	NA	9621219	9618062	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9618180_9619431_9619583_9621161
transcript_100188.known	chr19	-	1712	6	FSM	ENSG00000171466.10	ENST00000590155.5	1712	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	7.49933330370107	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGTCCTAAATGCCTTTT	-9673661	True	NA	-113	True	NA	NA	NA	9675082	9652712	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9653879_9656546_9656654_9658008_9658136_9659378_9659468_9660719_9660875_9675014
transcript_100192.known	chr19	+	2413	4	FSM	ENSG00000267106.9	ENST00000587536.6	2413	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	20.6074420214316	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGAGTGAGACTCCATCT	9620083	True	NA	NA	False	NA	NA	NA	9621486	9635446	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9621646_9626783_9626861_9632227_9632418_9633459
transcript_100193.known	chr19	+	2337	3	FSM	ENSG00000267106.9	ENST00000585797.6	2341	3	4	0	-1	0	multi-exon	FALSE	canonical	3	58	junction_1	13.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGAGTGAGACTCCATCT	9620082	True	NA	NA	False	NA	NA	NA	9621485	9635446	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9621646_9632227_9632418_9633459
transcript_100194.known	chr19	+	782	4	FSM	ENSG00000267106.9	ENST00000592851.6	785	4	3	0	-2	0	multi-exon	FALSE	canonical	2	5	junction_3	17.326921891156	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGCTGAAAACAGCAGCTA	9620143	True	NA	NA	False	AATAAA	-16	NA	9621546	9645489	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9621646_9626783_9626861_9632227_9632418_9645073
transcript_100198.known	chr19	-	2016	6	FSM	ENSG00000196605.7	ENST00000397902.6	2016	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	9.41063228481487	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTCCTCAGATCTTAGT	-9768538	True	NA	NA	False	NA	NA	NA	9768617	9757474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9758765_9759859_9759943_9762081_9762169_9763281_9763409_9764935_9765036_9768288
transcript_10020.nic	chr1	-	1354	8	ISM	ENSG00000162434.13	ENST00000342505.5	5092	25	-25	31699	-22	0	5prime_fragment	FALSE	canonical	3	132	junction_3	10.6080446947068	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTGGAAAATAAACACAAGAA	-64964808	True	NA	-22	True	AATAAA	-16	NA	64966574	64864927	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_64864973_64866865_64867209_64869310_64869475_64873369_64873524_64879024_64879149_64883276_64883476_64886258_64886342_64966332
transcript_100202.known	chr19	-	650	2	FSM	ENSG00000196605.7	ENST00000589038.1	650	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAATGTCATGACTATAA	-9792842	True	NA	-1	True	AATAAA	-22	NA	9793180	9787407	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9787811_9792933
transcript_100204.known	chr19	-	1920	4	FSM	ENSG00000127452.9	ENST00000589626.5	1920	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	131.562405977797	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTCAGTTTATTCATTCA	-9818192	True	NA	0	True	ATTAAA	-29	NA	9819079	9810266	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9811718_9813230_9813275_9818544_9818618_9818727
transcript_100205.known	chr19	-	879	4	FSM	ENSG00000127452.9	ENST00000592067.1	879	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	14.0554457615387	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGCTCAGCTATCTGCAG	-9818192	True	NA	NA	False	NA	NA	NA	9819079	9811281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9811718_9813230_9813275_9818544_9818618_9818753
transcript_10021.known	chr1	-	1263	8	FSM	ENSG00000162434.13	ENST00000672751.1	1263	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	52.1684868518166	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTGGAAAATAAACACAAGAA	NA	False	NA	-22	True	AATAAA	-16	NA	65067754	64864927	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_64864973_64866865_64867209_64869310_64869475_64873369_64873524_64879024_64879149_64883276_64883476_64886258_64886342_65067603
transcript_100210.known	chr19	-	777	4	FSM	ENSG00000127452.9	ENST00000590808.1	777	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	151.400132100339	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGACAGGGCTGGATGCTG	-9816284	True	NA	NA	False	NA	NA	NA	9818816	9811307	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9811718_9814137_9814343_9818544_9818618_9818727
transcript_100212.known	chr19	-	1873	3	FSM	ENSG00000127452.9	ENST00000247977.9	1873	3	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_1	11	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTATTCAGTTTATTCAT	-9818192	True	NA	-3	True	ATTAAA	-26	NA	9819079	9810269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9811718_9818544_9818618_9818727
transcript_100213.known	chr19	-	1843	3	FSM	ENSG00000127452.9	ENST00000588922.5	1843	3	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	114	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTATTCAGTTTATTCA	-9818189	True	NA	-4	True	ATTAAA	-25	NA	9819076	9810270	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9811718_9818544_9818618_9818753
transcript_100214.known	chr19	-	544	2	FSM	ENSG00000127452.9	ENST00000586469.1	544	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTGGCCGACCTGAGCAT	-9818216	True	NA	NA	False	NA	NA	NA	9819103	9811549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9811718_9818727
transcript_100215.known	chr19	-	1736	2	FSM	ENSG00000127452.9	ENST00000586651.5	1736	2	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTCAGTTTATTCATTCA	-9816297	True	NA	0	True	ATTAAA	-29	NA	9818829	9810266	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9811718_9818544
transcript_100217.known	chr19	+	407	5	FSM	ENSG00000198258.11	ENST00000586895.6	407	5	0	0	0	0	multi-exon	FALSE	canonical	3	3703	junction_1	510.830390149216	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTGTTGTCTCTGTAT	9787971	True	NA	22	True	AATAAA	-14	NA	9827917	9830115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9827985_9828326_9828394_9828591_9828676_9828836_9828875_9829964
transcript_100218.known	chr19	+	513	5	FSM	ENSG00000198258.11	ENST00000358666.7	513	5	0	0	0	0	multi-exon	FALSE	canonical	3	603	junction_1	1840.77706078167	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTGTTGTCTCTGTAT	9787945	True	NA	22	True	AATAAA	-14	NA	9827891	9830115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9828065_9828326_9828394_9828591_9828676_9828836_9828875_9829964
transcript_100219.nic	chr19	+	636	4	NIC	ENSG00000198258.11	novel	407	5	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	3703	junction_1	577.136802577074	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTGTTGTTGTCTCTGT	9787938	True	NA	20	True	AATAAA	-12	NA	9827884	9830113	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_9827985_9828326_9828676_9828836_9828875_9829964
transcript_100221.known	chr19	+	307	3	FSM	ENSG00000198258.11	ENST00000589960.5	307	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	1841.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTGTTGTCTCTGTAT	9787949	True	NA	22	True	AATAAA	-14	NA	9827895	9830115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9827985_9828326_9828394_9829964
transcript_100222.known	chr19	+	573	3	FSM	ENSG00000198258.11	ENST00000588141.1	573	3	0	0	0	0	multi-exon	FALSE	canonical	3	3703	junction_1	677	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGCACTTAGAAAATGGG	9787971	True	NA	NA	False	NA	NA	NA	9827917	9828993	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9827985_9828326_9828676_9828836
transcript_100227.known	chr19	+	648	5	FSM	ENSG00000127445.14	ENST00000588695.5	648	5	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_4	721.269843747817	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGCTCTCCTGTGTCTC	9815184	True	NA	13	True	ATTAAA	-13	NA	9835340	9849682	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9835403_9838435_9838649_9848029_9848141_9849089_9849202_9849532
transcript_100229.known	chr19	+	536	5	FSM	ENSG00000127445.14	ENST00000589058.5	536	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	910.249519362686	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCCTCGGGGCAGGGC	9815212	False	NA	NA	False	NA	NA	NA	9835368	9849214	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9835403_9836822_9836876_9838435_9838649_9848029_9848141_9849089
transcript_10023.nic	chr1	-	1309	7	ISM	ENSG00000162434.13	ENST00000342505.5	5092	25	-25	33637	-22	234	5prime_fragment	FALSE	canonical	3	132	junction_2	10.6770782520313	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGGCTGTTGGCAGTC	-64964808	True	NA	NA	False	CATAAA	-7	NA	64966574	64866865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_64867209_64869310_64869475_64873369_64873524_64879024_64879149_64883276_64883476_64886258_64886342_64966332
transcript_100230.known	chr19	+	755	5	FSM	ENSG00000127445.14	ENST00000586352.5	755	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	926.297839520313	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGACCGCCAGATTCTCC	9815189	True	NA	NA	False	NA	NA	NA	9835345	9849399	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9835403_9838011_9838076_9838435_9838649_9848029_9848141_9849089
transcript_100232.known	chr19	+	1009	4	FSM	ENSG00000127445.14	ENST00000247970.9	1009	4	0	0	0	0	multi-exon	FALSE	canonical	3	1813	junction_3	99.9344229426922	1464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGTGTCTCATTTCTC	9815161	True	NA	20	True	ATTAAA	-20	NA	9835317	9849689	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9835403_9838435_9838649_9848029_9848141_9849089
transcript_100236.known	chr19	+	878	3	FSM	ENSG00000127445.14	ENST00000587625.5	878	3	0	0	0	0	multi-exon	FALSE	canonical	3	1952	junction_2	52.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTCCTCCTCTTCAGTCC	9815166	True	NA	NA	False	NA	NA	NA	9835322	9848614	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9835403_9838435_9838649_9848029
transcript_10024.nic	chr1	-	714	5	ISM	ENSG00000162434.13	ENST00000673254.1	4930	25	-22	40196	-22	0	5prime_fragment	FALSE	canonical	3	141	junction_1	9.69535971483266	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGCAGAAAAATGGCTACG	-64964808	True	NA	NA	False	NA	NA	NA	64966574	64873457	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_64873524_64879024_64879149_64883276_64883476_64886258_64886342_64966332
transcript_100241.known	chr19	+	4022	3	FSM	ENSG00000127445.14	ENST00000586025.5	4022	3	0	0	0	0	multi-exon	FALSE	canonical	3	1813	junction_2	69.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGCTCTCCTGTGTCTC	9815174	True	NA	13	True	ATTAAA	-13	NA	9835330	9849682	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_9838649_9848029_9848141_9849089
transcript_100243.known	chr19	-	1982	6	FSM	ENSG00000105088.9	ENST00000264833.9	1982	6	0	0	0	0	multi-exon	FALSE	canonical	3	682	junction_1	19.6020407100893	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTCGGTGACTGTGTGTG	-9932493	True	NA	-6	True	AATAAA	-20	NA	9936515	9853717	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9854864_9856806_9856914_9857262_9857483_9857714_9857862_9860644_9860795_9936303
transcript_100245.known	chr19	-	2124	6	FSM	ENSG00000105088.9	ENST00000593091.2	2124	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	265.481148106603	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTCGGTGACTGTGTGTG	-9913744	True	NA	-6	True	AATAAA	-20	NA	9913836	9853717	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_9854864_9856806_9856914_9857262_9857483_9857714_9857862_9860644_9860795_9913482
transcript_100252.nic	chr19	+	2204	9	NIC	ENSG00000130813.18	novel	808	9	NA	NA	-8	0	intron_retention	FALSE	canonical	3	18	junction_4	73.9737073222642	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTACCAGAGGGGCGTC	10083679	True	NA	10	True	AATAAA	-16	NA	10086331	10093242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_10086449_10086928_10087053_10087250_10087301_10089110_10089209_10089306_10089379_10089656_10089696_10089897_10090048_10091249_10091631_10092069
transcript_100258.known	chr19	+	1928	8	FSM	ENSG00000130813.18	ENST00000253110.16	1928	8	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_6	41.5893432189997	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTACCAGAGGGGCGTCT	10083664	True	NA	11	True	AATAAA	-17	NA	10086316	10093243	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10086449_10086928_10087053_10087250_10087301_10089656_10089696_10089897_10090048_10091249_10091354_10091475_10091631_10092069
transcript_100261.known	chr19	+	1481	8	FSM	ENSG00000130813.18	ENST00000591813.5	1481	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	55.2700236132036	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGCCCTGGCCCCCCAA	10083687	True	NA	NA	False	AATACA	-33	NA	10086339	10092927	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10086449_10086928_10087053_10087250_10087301_10089656_10089696_10089897_10090048_10091249_10091354_10091583_10091631_10092069
transcript_100265.known	chr19	+	2079	7	FSM	ENSG00000130813.18	ENST00000585919.5	2079	7	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_6	21.5148527508066	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGGCGTCTTACCTACCC	10083644	True	NA	20	True	AATAAA	-26	NA	10086296	10093252	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10086449_10086928_10087053_10087250_10087301_10089656_10089696_10089897_10090048_10091249_10091631_10092069
transcript_100267.nic	chr19	+	2476	6	ISM	ENSG00000130813.18	ENST00000253110.16	1928	8	15	-2	-8	1	intron_retention	FALSE	canonical	3	156	junction_3	15.447977213862	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACCAGAGGGGCGTCTTA	10083679	True	NA	13	True	AATAAA	-19	NA	10086331	10093245	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_10086449_10086928_10087053_10087250_10087301_10089656_10089696_10089897_10090048_10091249
transcript_100268.known	chr19	+	2302	12	FSM	ENSG00000130810.20	ENST00000253107.12	2302	12	0	0	0	0	multi-exon	FALSE	canonical	3	883	junction_9	66.6611016961079	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAAGAGAATCACTTAAAC	10091390	True	NA	46	True	NA	NA	NA	10106361	10112012	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10106413_10106500_10106672_10107504_10107607_10107803_10107855_10107963_10108135_10109630_10109708_10109912_10110021_10110122_10110247_10110323_10110403_10110484_10110615_10110696_10110867_10110944
transcript_100279.known	chr19	-	1103	11	FSM	ENSG00000130811.12	ENST00000253108.9	1103	11	0	0	0	0	multi-exon	FALSE	canonical	3	1901	junction_4	121.602796020486	1866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTTCTTTTTGTTCTTG	-10088965	True	NA	-5	True	AATAAA	-19	NA	10119899	10115013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10115130_10115478_10115586_10115683_10115821_10115966_10116075_10116799_10116990_10117083_10117189_10118667_10118728_10118867_10118957_10119087_10119172_10119653_10119701_10119839
transcript_100296.nic	chr19	-	1871	10	NIC	ENSG00000130811.12	novel	1103	11	NA	NA	-28	0	intron_retention	FALSE	canonical	3	1902	junction_9	115.769886700587	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTACTTGGTTCTTTTTGTT	NA	False	NA	-9	True	AATAAA	-15	NA	10119946	10115017	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_10115130_10115478_10115586_10115683_10115821_10115966_10116990_10117083_10117189_10118667_10118728_10118867_10118957_10119087_10119172_10119653_10119701_10119839
transcript_10033.known	chr1	+	6887	6	FSM	ENSG00000162433.15	ENST00000545314.5	6887	6	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	439.731281580012	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGTTTGTATAGCTT	65147463	False	NA	39	True	AATAAA	-27	NA	65147548	65232145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_65147666_65148277_65148553_65190709_65190830_65218753_65218927_65224751_65224871_65226062
transcript_100334.known	chr19	-	537	6	FSM	ENSG00000130811.12	ENST00000587681.5	537	6	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	828.547500147095	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTCGAACTCCTGACCTC	-10088974	True	NA	NA	False	NA	NA	NA	10119908	10118369	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10118558_10118667_10118728_10118867_10118957_10119087_10119172_10119653_10119701_10119839
transcript_100337.known	chr19	+	1575	11	FSM	ENSG00000130810.20	ENST00000393793.5	1575	11	0	0	0	0	multi-exon	FALSE	canonical	3	883	junction_8	69.699067425612	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCCCAGCCCTTCCACTC	10091447	True	NA	2	True	CATAAA	-8	NA	10106418	10111254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10106672_10107504_10107607_10107803_10107855_10107963_10108135_10109630_10109708_10109912_10110021_10110122_10110247_10110323_10110403_10110484_10110615_10110696_10110867_10110944
transcript_100338.known	chr19	-	762	5	FSM	ENSG00000130811.12	ENST00000590940.5	762	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	918.528850935015	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGATTCTTTTAATTTTTT	-10088766	False	NA	65	True	AATAAA	-37	NA	10119700	10118075	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10118558_10118667_10118728_10118867_10118957_10119087_10119172_10119653
transcript_100339.known	chr19	-	5274	41	FSM	ENSG00000130816.17	ENST00000359526.9	5274	41	0	0	0	0	multi-exon	TRUE	canonical	3	119	junction_37	131.65442453636	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGTGGGTATTCGTGA	-10184100	True	NA	47	True	AATAAA	-17	NA	10194953	10133345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10133702_10134216_10134308_10135735_10135853_10136120_10136288_10137084_10137281_10137831_10138010_10138438_10138606_10139675_10139818_10140045_10140329_10140780_10140910_10141104_10141190_10142027_10142221_10143765_10143988_10146350_10146525_10148883_10149018_10149452_10149658_10149852_10149969_10151397_10151546_10151749_10151848_10154292_10154480_10154585_10154774_10154904_10155057_10155852_10155946_10156390_10156510_10159657_10159768_10159841_10159923_10160017_10160064_10160383_10160419_10162666_10162749_10163325_10163361_10166597_10166686_10168329_10168365_10173089_10173175_10173870_10173906_10175539_10175619_10177291_10177368_10180186_10180235_10180349_10180570_10180777_10180886_10182040_10182078_10194819
transcript_100341.known	chr19	-	5175	40	FSM	ENSG00000130816.17	ENST00000677013.1	5175	40	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_37	122.196062588087	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATAAACCACCCTGGGTG	-10184100	True	NA	36	True	AATAAA	-6	NA	10194953	10133356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10133702_10134216_10134308_10135735_10135853_10136120_10136288_10137084_10137281_10137831_10138010_10138438_10138606_10139675_10139818_10140045_10140329_10140780_10140910_10141104_10141190_10142027_10142221_10143765_10143988_10146350_10146525_10148883_10149018_10149452_10149658_10149852_10149969_10151397_10151546_10151749_10151848_10154292_10154480_10154585_10154774_10154904_10155057_10155852_10155946_10156390_10156510_10159657_10159768_10159841_10159923_10160017_10160064_10160383_10160419_10162666_10162749_10163325_10163361_10166597_10166686_10168329_10168365_10173089_10173175_10173870_10173906_10175539_10175619_10177291_10177368_10180349_10180530_10180777_10180886_10182040_10182078_10194819
transcript_100342.known	chr19	-	5408	40	FSM	ENSG00000130816.17	ENST00000340748.8	5408	40	0	0	0	0	multi-exon	FALSE	canonical	3	468	junction_36	83.2966941150313	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGTGGGTATTCGTGA	NA	False	NA	47	True	AATAAA	-17	NA	10195135	10133345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10133702_10134216_10134308_10135735_10135853_10136120_10136288_10137084_10137281_10137831_10138010_10138438_10138606_10139675_10139818_10140045_10140329_10140780_10140910_10141104_10141190_10142027_10142221_10143765_10143988_10146350_10146525_10148883_10149018_10149452_10149658_10149852_10149969_10151397_10151546_10151749_10151848_10154292_10154480_10154585_10154774_10154904_10155057_10155852_10155946_10156390_10156510_10159657_10159768_10159841_10159923_10160017_10160064_10160383_10160419_10162666_10162749_10163325_10163361_10166597_10166686_10168329_10168365_10173089_10173175_10173870_10173906_10175539_10175619_10177291_10177368_10180349_10180570_10180777_10180886_10182040_10182078_10194819
transcript_100353.nic	chr19	-	854	9	ISM	ENSG00000130816.17	ENST00000359526.9	5274	41	-32	39744	-30	0	5prime_fragment	FALSE	canonical	3	119	junction_5	176.84204640017	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGCTCTATCACCTCTA	-10184132	True	NA	27	True	AAGAAA	-12	NA	10194985	10173089	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_10173175_10173870_10173906_10175539_10175619_10177291_10177368_10180186_10180235_10180349_10180570_10180777_10180886_10182040_10182078_10194819
transcript_100360.known	chr19	-	3643	2	FSM	ENSG00000267534.4	ENST00000646641.1	3643	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTGGTTGGTGTGTCTT	-10230239	True	NA	-7	True	AATAAA	-17	NA	10231331	10221432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10224948_10231203
transcript_100361.known	chr19	-	841	9	FSM	ENSG00000130816.17	ENST00000588952.5	841	9	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_7	223.234426948444	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGCTCTATCACCTCTA	-10230194	True	NA	27	True	AAGAAA	-12	NA	10231286	10173089	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10173175_10173870_10173906_10175539_10175619_10177291_10177368_10180349_10180570_10180777_10180886_10182040_10182078_10218751_10218870_10231203
transcript_100362.known	chr19	+	1218	9	FSM	ENSG00000105364.14	ENST00000253099.11	1218	9	0	0	0	0	multi-exon	FALSE	canonical	3	1042	junction_8	74.1788379526129	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAACTTCTCAGTGTCATT	10235607	True	NA	20	True	AATAAA	-28	NA	10252213	10260055	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10252311_10252396_10252464_10252550_10252702_10254588_10254641_10256707_10256826_10258221_10258329_10258412_10258523_10258608_10258686_10259616
transcript_100363.known	chr19	+	1423	8	FSM	ENSG00000105364.14	ENST00000590669.5	1423	8	0	0	0	0	multi-exon	FALSE	canonical	3	1121	junction_4	56.3856979984775	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCAAAGTCACCTCTGTC	10251681	False	NA	NA	False	NA	NA	NA	10252009	10259125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10252311_10252396_10252464_10252550_10252702_10254588_10254641_10256707_10256826_10258221_10258329_10258412_10258523_10258608
transcript_100367.nic	chr19	+	1576	7	ISM	ENSG00000105364.14	ENST00000590669.5	1423	8	-67	0	-1	0	intron_retention	FALSE	canonical	3	1121	junction_4	59.5186712067921	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCAAAGTCACCTCTGTC	10251807	False	NA	NA	False	NA	NA	NA	10251942	10259125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_10252311_10252396_10252464_10252550_10252702_10254588_10254641_10256707_10256826_10258221_10258329_10258412
transcript_100369.known	chr19	+	2967	7	FSM	ENSG00000090339.9	ENST00000264832.8	2967	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	4.50924975282289	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCTTGTGTGAGTTGAG	10270838	True	NA	11	True	AATAAA	-16	NA	10271119	10286615	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10271227_10274764_10275029_10283480_10283787_10284032_10284321_10284402_10284658_10284782_10285029_10285114
transcript_100375.known	chr19	+	552	3	FSM	ENSG00000105364.14	ENST00000588963.1	552	3	0	0	0	0	multi-exon	FALSE	canonical	3	1164	junction_1	28	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGGCACATAATAAGTTC	10252140	False	NA	NA	False	AATAAA	-9	NA	10252304	10253029	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10252311_10252396_10252464_10252550
transcript_100376.known	chr19	+	1290	3	FSM	ENSG00000105371.10	ENST00000380770.5	1290	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	2.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTGTCCTGTGACCTAA	10286797	True	NA	19	True	AATAAA	-15	NA	10286954	10288520	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10287407_10287535_10287839_10287985
transcript_100377.known	chr19	+	1176	3	FSM	ENSG00000105371.10	ENST00000340992.4	1176	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	7	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGCTTCCTTAACCAGC	10286816	True	NA	1	True	AATAAA	-41	NA	10286973	10288502	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10287407_10287612_10287839_10287985
transcript_100378.known	chr19	+	3029	11	FSM	ENSG00000105376.5	ENST00000221980.5	3029	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	3.85227205685164	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTGTCTCCGCTTCTGT	10289922	False	NA	NA	False	AATAAA	-16	NA	10289951	10296778	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10290126_10291071_10291342_10291488_10291810_10292034_10292323_10292611_10292867_10292997_10293247_10293697_10293944_10294039_10294319_10294400_10294641_10295345_10295613_10296338
transcript_100382.nic	chr19	-	3415	14	NIC	ENSG00000161847.14	novel	3484	13	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_5	171.901134376711	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGAGTTGGCTGGTTCTTG	-10328925	True	NA	NA	False	ATTAAA	-28	NA	10333535	10316211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_10317601_10317689_10317774_10318228_10318373_10319165_10319241_10320654_10320783_10320857_10320952_10321047_10321260_10321530_10321619_10322644_10322740_10323144_10323275_10323374_10323567_10328641_10329112_10330459_10330527_10333288
transcript_100386.known	chr19	-	3586	13	FSM	ENSG00000161847.14	ENST00000611074.4	3586	13	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_10	51.7807879430199	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAATCAGAGTTGGCTG	-10333116	False	NA	NA	False	ATTAAA	-21	NA	10333638	10316218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10317601_10317689_10317774_10318228_10318373_10319165_10319241_10320654_10320952_10321047_10321260_10321530_10321619_10322644_10322740_10323144_10323275_10323374_10323567_10328641_10329112_10330459_10330527_10333288
transcript_10039.known	chr1	+	6998	6	FSM	ENSG00000162433.15	ENST00000395334.6	6998	6	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	468.754775975669	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGTTTGTATAGCTT	65147722	False	NA	39	True	AATAAA	-27	NA	65147829	65232145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_65148058_65148277_65148553_65190709_65190830_65218753_65218927_65224751_65224871_65226062
transcript_100400.nic	chr19	-	3579	12	NIC	ENSG00000161847.14	novel	3484	13	NA	NA	-6	0	intron_retention	FALSE	canonical	3	618	junction_9	53.6577769274258	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGAGTTGGCTGGTTCTTG	-10328925	True	NA	NA	False	ATTAAA	-28	NA	10333535	10316211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_10317774_10318228_10318373_10319165_10319241_10320654_10320952_10321047_10321260_10321530_10321619_10322644_10322740_10323144_10323275_10323374_10323567_10328641_10329112_10330459_10330527_10333288
transcript_100402.nic	chr19	-	2539	11	NIC	ENSG00000167807.15	novel	1956	11	NA	NA	-15	624	intron_retention	FALSE	canonical	0	0	junction_6	172.781625180457	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAAGCCTGTGATTTGGG	-10316013	False	NA	-1	True	AATAAA	-20	NA	10316024	10304802	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_10305209_10305389_10305484_10305845_10305953_10308184_10308551_10309348_10309449_10309556_10310284_10310326_10310643_10310852_10310941_10315385_10315493_10315704_10315760_10315851
transcript_100408.nic	chr19	-	2647	10	NIC	ENSG00000167807.15	novel	1956	11	NA	NA	-15	624	intron_retention	FALSE	canonical	0	0	junction_5	174.76425037712	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAAGCCTGTGATTTGGG	-10316013	False	NA	-1	True	AATAAA	-20	NA	10316024	10304802	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_10305209_10305389_10305484_10305845_10305953_10308184_10308551_10309348_10310284_10310326_10310643_10310852_10310941_10315385_10315493_10315704_10315760_10315851
transcript_100415.known	chr19	-	1735	7	FSM	ENSG00000076662.10	ENST00000160262.10	1735	7	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_4	49.5939064357261	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTGATTCCACCC	-10339102	False	522	0	True	AATAAA	-18	NA	10339624	10333775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10334060_10334159_10334409_10334527_10334783_10335065_10335354_10335670_10335977_10338681_10338949_10339538
transcript_100418.nnic	chr19	-	1696	6	NIC	ENSG00000076662.10	novel	1735	7	NA	NA	-215	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_3	51.6155015475002	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTGTGGTTTGATTCCA	NA	False	NA	-3	True	AATAAA	-15	NA	10339876	10333778	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_10334060_10334159_10334409_10334527_10334783_10335670_10335977_10338681_10338949_10339538
transcript_100421.nic	chr19	-	812	5	NIC	ENSG00000267673.6	novel	1012	5	NA	NA	-9	0	intron_retention	FALSE	canonical	3	35	junction_1	147.384700698546	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGCATGTTGAGTGTC	-10316013	False	NA	-8	True	AATAAA	-13	NA	10316024	10310216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_10310606_10310852_10310941_10315385_10315493_10315704_10315760_10315851
transcript_100423.known	chr19	-	1012	5	FSM	ENSG00000267673.6	ENST00000393708.3	1012	5	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_4	71.820957944043	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTGGAGTGGTGGTAAGTG	-10312653	True	NA	NA	False	AGTAAA	-6	NA	10316015	10310044	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10310643_10310852_10310941_10315385_10315493_10315704_10315760_10315851
transcript_100426.nic	chr19	-	2584	5	NIC	ENSG00000076662.10	novel	2057	6	NA	NA	-215	0	intron_retention	FALSE	canonical	3	62	junction_3	41.7851648315524	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTGTGGTTTGATTCCA	NA	False	NA	-3	True	AATAAA	-15	NA	10339876	10333778	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_10334060_10334159_10334409_10334527_10335977_10338681_10338949_10339538
transcript_100428.known	chr19	-	2491	4	FSM	ENSG00000076662.10	ENST00000587992.1	2491	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	36.1109401705356	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTGATTCCACCC	-10339139	False	NA	0	True	AATAAA	-18	NA	10339661	10333775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10334060_10334159_10335977_10338681_10338949_10339538
transcript_100429.known	chr19	+	2813	1	FSM	ENSG00000274425.1	ENST00000612689.1	2813	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACGTTTATGACTATGAT	10333376	False	NA	16	True	AATAAA	-22	NA	10333435	10336248	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10333400_10336200
transcript_100430.known	chr19	-	773	4	FSM	ENSG00000267673.6	ENST00000492239.5	773	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	198.236110624567	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGCATGTTGAGTGTC	-10315784	False	NA	-8	True	AATAAA	-13	NA	10315795	10310216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10310643_10310852_10310941_10315385_10315554_10315704
transcript_100431.known	chr19	-	4243	25	FSM	ENSG00000105397.14	ENST00000525621.6	4243	25	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	23.0125267819266	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	-10379022	True	NA	-12	True	AATAAA	-16	NA	10380572	10350532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10350969_10351051_10351163_10352433_10352552_10352925_10353099_10353527_10353647_10354041_10354235_10354511_10354610_10356567_10356719_10357763_10357919_10358002_10358139_10359174_10359303_10361510_10361599_10361769_10361956_10362077_10362182_10362263_10362457_10362548_10362658_10364613_10364772_10364850_10365049_10365516_10365899_10366416_10366581_10368054_10368203_10368294_10368419_10378213_10378427_10379614_10379780_10380379
transcript_100438.nnic	chr19	-	3916	23	NIC	ENSG00000105397.14	novel	4243	25	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_3	23.3572683221107	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	-10378987	True	NA	-12	True	AATAAA	-16	NA	10380537	10350532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_10350969_10351051_10351163_10352433_10352552_10354041_10354235_10354511_10354610_10356567_10356719_10357763_10357919_10358002_10358139_10359174_10359303_10361510_10361599_10361769_10361956_10362077_10362182_10362263_10362457_10362548_10362658_10364613_10364772_10364850_10365049_10365516_10365899_10366416_10366581_10368054_10368203_10368294_10368419_10378213_10378427_10379614_10379780_10380379
transcript_100445.nic	chr19	-	3707	21	NIC	ENSG00000105397.14	novel	4243	25	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_13	8.43134034421574	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	-10379007	True	NA	-12	True	AATAAA	-16	NA	10380557	10350532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_10350969_10354041_10354235_10354511_10354610_10356567_10356719_10357763_10357919_10358002_10358139_10359174_10359303_10361510_10361599_10361769_10361956_10362077_10362182_10362263_10362457_10362548_10362658_10364613_10364772_10364850_10365049_10365516_10365899_10366416_10366581_10368054_10368203_10368294_10368419_10378213_10378427_10379614_10379780_10380379
transcript_100457.nic	chr19	-	707	2	ISM	ENSG00000105397.14	ENST00000530560.5	558	4	2301	-215	-209	0	3prime_fragment	FALSE	canonical	3	43	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	NA	False	NA	-12	True	AATAAA	-16	NA	10354312	10350532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_10350969_10354041
transcript_100460.known	chr19	+	4897	15	FSM	ENSG00000065989.16	ENST00000380702.7	4897	15	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_1	12.1646862613359	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCTGGCTGATGTGGCT	10420461	True	NA	4	True	ATTAAA	-17	NA	10420537	10469630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10421085_10446217_10446410_10448916_10448954_10449079_10449151_10450602_10450653_10450828_10450942_10454828_10454923_10457878_10458103_10459399_10459499_10459594_10459760_10461003_10461104_10461525_10461681_10461876_10462000_10463792_10463976_10466886
transcript_100462.known	chr19	+	2583	15	FSM	ENSG00000065989.16	ENST00000293683.9	2583	15	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	11.9020234945704	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCAGACCTCTGTCCCTG	10430771	False	NA	NA	False	NA	NA	NA	10430844	10467621	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10431087_10446217_10446410_10448916_10448954_10449079_10449151_10450602_10450653_10450828_10450942_10454828_10454923_10457878_10458103_10459399_10459499_10459594_10459760_10461003_10461104_10461525_10461681_10461876_10462000_10463792_10463976_10466886
transcript_100464.known	chr19	+	2478	15	FSM	ENSG00000065989.16	ENST00000440014.6	2478	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	12.363540870525	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCAGACCTCTGTCCCTG	10432391	False	NA	NA	False	NA	NA	NA	10432434	10467621	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10432572_10446217_10446410_10448916_10448954_10449079_10449151_10450602_10450653_10450828_10450942_10454828_10454923_10457878_10458103_10459399_10459499_10459594_10459760_10461003_10461104_10461525_10461681_10461876_10462000_10463792_10463976_10466886
transcript_100483.nic	chr19	+	1675	4	ISM	ENSG00000065989.16	ENST00000344979.7	2579	10	8418	0	2388	0	3prime_fragment	FALSE	canonical	3	38	junction_2	2.44948974278318	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACTGTAGATGCTCCTGT	NA	False	NA	77	True	AAAAAG	-34	NA	10461356	10467931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_10461681_10461876_10462000_10463792_10463976_10466886
transcript_100487.known	chr19	-	1618	8	FSM	ENSG00000105401.9	ENST00000222005.7	1618	8	0	0	0	0	multi-exon	FALSE	canonical	3	1137	junction_5	106.673639227892	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGCTGCTGGGAGGGCC	-10379778	True	NA	-28	True	AATAAA	-16	NA	10403542	10391132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10391707_10393085_10393158_10393258_10393442_10395020_10395144_10395227_10395344_10395434_10395544_10395927_10396204_10403377
transcript_100488.known	chr19	-	1377	7	FSM	ENSG00000105401.9	ENST00000591248.5	1377	7	0	0	0	0	multi-exon	FALSE	canonical	3	1342	junction_5	50.2449555234708	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCGCTGCTCGGCCCAGCC	-10379766	True	NA	11	True	AAAACA	-38	NA	10403530	10391452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10391707_10393085_10393158_10393258_10393442_10395020_10395144_10395227_10395544_10395927_10396204_10403377
transcript_100496.known	chr19	-	2648	6	FSM	ENSG00000079999.14	ENST00000393623.6	2648	6	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_5	70.382952481407	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGGCTCTGGGCTGGAG	-10502886	False	NA	-8	True	AATAAA	-24	NA	10502896	10486125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10486819_10489191_10489369_10489647_10489854_10491576_10492263_10499394_10500081_10502696
transcript_100498.known	chr19	-	2565	6	FSM	ENSG00000079999.14	ENST00000171111.10	2565	6	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	166.428843653977	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCTGGGCTGGAGG	-10502570	True	NA	-7	True	AATAAA	-25	NA	10503356	10486124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10486819_10489191_10489369_10489647_10489854_10491576_10492263_10499394_10500081_10503240
transcript_100503.nic	chr19	-	2402	5	NIC	ENSG00000079999.14	novel	2648	6	NA	NA	70	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	186.245805321892	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCTGGGCTGGAGG	-10502816	False	786	-7	True	AATAAA	-25	NA	10502826	10486124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_10486819_10489647_10489854_10491576_10492263_10499394_10500081_10502696
transcript_100512.known	chr19	-	2338	2	FSM	ENSG00000180739.15	ENST00000333430.6	2338	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCAGATCCTTCATTAAA	-10517332	True	NA	NA	False	AATAAA	-16	NA	10517447	10512741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10515030_10517397
transcript_100513.known	chr19	-	2191	2	FSM	ENSG00000180739.15	ENST00000439028.3	2191	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTTCTTTCTTTCTT	-10517826	True	NA	-6	True	AATAAA	-18	NA	10517931	10512946	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10515030_10517823
transcript_100514.known	chr19	-	3005	19	FSM	ENSG00000129347.21	ENST00000652042.1	3005	19	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_4	25.0843023068656	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCATCCCCTCCCTTTA	-10562632	True	NA	-7	True	AATAAA	-24	NA	10566026	10553084	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10554282_10555086_10555186_10555284_10555350_10557551_10557683_10557768_10557896_10557971_10558061_10558163_10558240_10559358_10559530_10559612_10559709_10559809_10559937_10560311_10560449_10561002_10561081_10561168_10561266_10561666_10561717_10561790_10561846_10562728_10562838_10564928_10565035_10565716_10565791_10565905
transcript_100521.known	chr19	-	2545	18	FSM	ENSG00000129347.21	ENST00000478863.5	2545	18	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_9	21.8067955504685	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAACACGTGTAGCTG	-10562577	True	NA	NA	False	NA	NA	NA	10565971	10553575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10554282_10555086_10555186_10555284_10555350_10557551_10557896_10557971_10558061_10558163_10558240_10559358_10559530_10559612_10559709_10559809_10559937_10560311_10560449_10561002_10561081_10561168_10561266_10561666_10561717_10561790_10561846_10562728_10562838_10564928_10565035_10565716_10565791_10565905
transcript_100541.known	chr19	-	3744	17	FSM	ENSG00000129347.21	ENST00000536689.5	3744	17	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_9	21.566394575821	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCATCCCCTCCCTTTA	-10562603	True	NA	-7	True	AATAAA	-24	NA	10565997	10553084	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10554282_10555086_10555186_10555284_10555350_10557551_10557896_10557971_10558061_10558163_10558240_10559358_10559530_10559612_10559709_10559809_10559937_10560311_10560449_10561002_10561081_10561168_10561266_10561666_10561717_10561790_10561846_10562728_10562838_10564928_10565791_10565905
transcript_100553.nic	chr19	-	1166	11	ISM	ENSG00000129347.21	ENST00000478863.5	2545	18	-178	6044	-118	190	5prime_fragment	FALSE	canonical	3	144	junction_2	15.4883827432047	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGAGGGTGAGTGTGGGGG	-10566133	False	NA	-1	True	NA	NA	NA	10566149	10559619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_10559709_10559809_10559937_10560311_10560449_10561002_10561081_10561168_10561266_10561666_10561717_10561790_10561846_10562728_10562838_10564928_10565035_10565716_10565791_10565905
transcript_100555.known	chr19	+	1555	10	FSM	ENSG00000130734.10	ENST00000588857.5	1555	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	99.6716832628227	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGAGGGGATGAGGGGAAA	10540612	True	NA	NA	False	NA	NA	NA	10543916	10553067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10544326_10544782_10544867_10544956_10545131_10546838_10547072_10547188_10547254_10548903_10549035_10551896_10551976_10552044_10552122_10552204_10552325_10552884
transcript_100557.known	chr19	+	1963	10	FSM	ENSG00000130734.10	ENST00000309469.9	1963	10	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_4	37.4515324646485	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTGGGTGTGGCTGGGCGC	10540599	True	NA	15	True	AATAAA	-15	NA	10543903	10553418	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10544326_10544782_10544867_10544956_10545131_10546838_10547116_10547188_10547254_10548903_10549035_10551896_10551976_10552044_10552122_10552204_10552325_10552884
transcript_100561.known	chr19	+	1752	10	FSM	ENSG00000130734.10	ENST00000586417.5	1752	10	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	84.2620837947419	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGTGGGATCTTGAGCTC	10540590	True	NA	NA	False	NA	NA	NA	10543894	10553124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10544326_10544708_10544867_10544956_10545131_10546838_10547116_10547188_10547254_10548903_10549035_10551896_10551976_10552044_10552122_10552204_10552325_10552884
transcript_10057.known	chr1	+	6845	5	FSM	ENSG00000162433.15	ENST00000327299.8	6845	5	0	0	0	0	multi-exon	FALSE	canonical	3	754	junction_3	246.432926980142	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGTTTGTATAGCTT	65131610	True	NA	39	True	AATAAA	-27	NA	65148202	65232145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_65148553_65190709_65190830_65218753_65218927_65224751_65224871_65226062
transcript_100571.known	chr19	+	1619	9	FSM	ENSG00000130734.10	ENST00000588667.5	1619	9	0	0	0	0	multi-exon	TRUE	canonical	3	33	junction_3	94.9496577139697	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTGGGTGTGGCTGGGCGC	10540666	False	NA	15	True	AATAAA	-15	NA	10543970	10553418	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10544326_10544782_10544867_10544956_10545131_10547188_10547254_10548903_10549035_10551896_10551976_10552044_10552122_10552204_10552325_10552884
transcript_100580.nic	chr19	+	1631	8	NIC	ENSG00000130734.10	novel	1619	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_3	87.386544520683	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTGGGTGTGGCTGGGCGC	10540589	True	NA	15	True	AATAAA	-15	NA	10543893	10553418	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_10544326_10544782_10544867_10544956_10545131_10548903_10549035_10551896_10551976_10552044_10552122_10552204_10552325_10552884
transcript_100592.known	chr19	-	2608	18	FSM	ENSG00000129347.21	ENST00000612875.4	2608	18	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_4	25.6560966266821	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAATTAAA	-10562626	True	NA	NA	False	NA	NA	NA	10566020	10553590	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10554282_10555086_10555186_10555284_10555350_10557551_10557683_10557768_10557896_10557971_10558061_10558163_10558240_10559358_10559530_10559612_10559709_10559809_10559937_10560311_10560449_10561002_10561081_10561168_10561266_10561666_10561717_10561790_10561846_10562728_10562838_10564928_10565035_10565716
transcript_100593.known	chr19	-	1086	3	FSM	ENSG00000129355.7	ENST00000335766.2	1086	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	9	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTGTTGGAAGCTTGT	-10569042	False	NA	NA	False	NA	NA	NA	10569059	10566600	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10567418_10568512_10568669_10568946
transcript_100594.known	chr19	-	1425	2	FSM	ENSG00000129355.7	ENST00000393599.3	1425	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGGGTGGCTTCTGATTT	-10568962	False	NA	-2	True	ATTAAA	-23	NA	10568979	10566459	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10567418_10568512
transcript_100607.known	chr19	-	1757	12	FSM	ENSG00000129354.12	ENST00000590923.5	1757	12	0	0	0	0	multi-exon	TRUE	canonical	3	154	junction_6	284.910860353036	2485	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGCCTATGTGCTTGT	-10582126	True	NA	-10	True	ATTAAA	-13	NA	10587315	10572670	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10573089_10574416_10574493_10574903_10575030_10577197_10577357_10578891_10578964_10579715_10579865_10581265_10581393_10581486_10581635_10581747_10581879_10583605_10583674_10583913_10584071_10587189
transcript_10062.known	chr1	+	928	5	FSM	ENSG00000162433.15	ENST00000474968.5	928	5	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	476.860238958964	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTTCAAATGGTGTGTAA	65146967	True	NA	NA	False	AAGAAA	-14	NA	65149001	65226439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_65149141_65190709_65190830_65218753_65218927_65224751_65224871_65226062
transcript_100654.nic	chr19	+	2996	23	NIC	ENSG00000129353.15	novel	3784	22	NA	NA	-109	-218	combination_of_known_junctions	FALSE	canonical	3	37	junction_22	154.150216529846	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCGTCTGTCTCAACAGC	NA	False	NA	34	True	ATTAAA	-17	NA	10625410	10643912	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_10625671_10626252_10626302_10627721_10627796_10627919_10628005_10631056_10631142_10631274_10631386_10631474_10631536_10631625_10631750_10631867_10631952_10632043_10632157_10634755_10634888_10634973_10635074_10635162_10635256_10635430_10635516_10636322_10636586_10636661_10636757_10637643_10637748_10637855_10637930_10638022_10638094_10638226_10638316_10642366_10642452_10642896_10643022_10643278
transcript_100655.nic	chr19	+	3641	23	NIC	ENSG00000129353.15	novel	3784	22	NA	NA	-109	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_22	154.150216529846	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCCTGGTGTGTTTGTTG	NA	False	NA	19	True	AATAAA	-19	NA	10625410	10644557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_10625671_10626252_10626302_10627721_10627796_10627919_10628005_10631056_10631142_10631274_10631386_10631474_10631536_10631625_10631750_10631867_10631952_10632043_10632157_10634755_10634888_10634973_10635074_10635162_10635256_10635430_10635516_10636322_10636586_10636661_10636757_10637643_10637748_10637855_10637930_10638022_10638094_10638226_10638316_10642366_10642452_10642896_10643022_10643278
transcript_100657.nic	chr19	+	3780	22	NIC	ENSG00000129353.15	novel	3301	22	NA	NA	-37	0	intron_retention	TRUE	canonical	3	152	junction_21	135.899589450073	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCCTGGTGTGTTTGTTG	10599255	True	NA	19	True	AATAAA	-19	NA	10602419	10644557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_10602562_10626252_10626302_10627721_10627796_10627919_10628005_10631056_10631142_10631274_10631386_10631474_10631536_10631625_10631750_10631867_10631952_10632043_10632157_10634755_10634888_10634973_10635074_10635162_10635256_10635430_10635516_10636322_10636586_10636661_10636757_10637643_10637748_10637855_10637930_10638022_10638094_10638226_10638316_10642366_10642452_10642896
transcript_100658.known	chr19	+	3301	22	FSM	ENSG00000129353.15	ENST00000407327.8	3301	22	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	105.290226260711	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGTCCAGGCCTGGTGTG	10599345	True	NA	12	True	AATAAA	-12	NA	10602509	10644550	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10602562_10626252_10626302_10627721_10627796_10627919_10628005_10631056_10631142_10631274_10631386_10631474_10631536_10631625_10631750_10631867_10631952_10632043_10632157_10634755_10634888_10634973_10635074_10635162_10635256_10635430_10635516_10636322_10636586_10636661_10636757_10637643_10637748_10637855_10637930_10638022_10638094_10638226_10638316_10642366_10642452_10643278
transcript_100667.known	chr19	+	3784	22	FSM	ENSG00000129353.15	ENST00000586078.5	3784	22	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_21	110.033101595438	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCCTGGTGTGTTTGTTG	10618080	True	NA	19	True	AATAAA	-19	NA	10625524	10644557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10625671_10626252_10626302_10627721_10627796_10627919_10628005_10631056_10631142_10631274_10631386_10631474_10631536_10631625_10631750_10631867_10631952_10632043_10632157_10634755_10634888_10634973_10635074_10635162_10635256_10635430_10635516_10636322_10636586_10636661_10636757_10637643_10637748_10637855_10637930_10638022_10638094_10638226_10638316_10642366_10642452_10642896
transcript_100669.known	chr19	+	3374	22	FSM	ENSG00000129353.15	ENST00000335757.10	3374	22	0	0	0	0	multi-exon	FALSE	canonical	3	413	junction_1	66.3069889230792	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCCTGGTGTGTTTGTTG	10618108	True	NA	19	True	AATAAA	-19	NA	10625552	10644557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10625671_10626252_10626302_10627721_10627796_10627919_10628005_10631056_10631142_10631274_10631386_10631474_10631536_10631625_10631750_10631867_10631952_10632043_10632157_10634755_10634888_10634973_10635074_10635162_10635256_10635430_10635516_10636322_10636586_10636661_10636757_10637643_10637748_10637855_10637930_10638022_10638094_10638226_10638316_10642366_10642452_10643278
transcript_10068.known	chr1	+	867	5	FSM	ENSG00000162433.15	ENST00000479060.1	867	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	552.442078411846	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTACAGTGTGGATTTCAAA	65165882	True	NA	NA	False	AAGAAA	-4	NA	65165931	65226429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_65166020_65190709_65190830_65218753_65218927_65224751_65224871_65226062
transcript_100745.known	chr19	+	2577	8	FSM	ENSG00000129353.15	ENST00000589561.5	2577	8	0	0	0	0	multi-exon	FALSE	canonical	3	446	junction_7	69.6797338264323	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGGCCTGGTGTGTTTGT	10635784	False	NA	17	True	AATAAA	-17	NA	10635803	10644555	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10636586_10636661_10636757_10637643_10637748_10637855_10637930_10638022_10638094_10638226_10638316_10642366_10642452_10643278
transcript_100746.known	chr19	-	1983	1	FSM	ENSG00000267100.1	ENST00000591501.1	1983	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTCTGGTCCTTTGTTT	-10651485	True	NA	-4	True	AATAAA	-21	NA	10653844	10651861	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10651900_10653800
transcript_100748.known	chr19	+	6119	20	FSM	ENSG00000129351.17	ENST00000449870.5	6119	20	0	0	0	0	multi-exon	FALSE	canonical	3	537	junction_17	393.978766811184	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGCGTTCGTTCATTTT	10624864	True	NA	35	True	AATAAA	-35	NA	10654260	10692417	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10654488_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683124_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10687345_10687709_10688549_10688679_10689178
transcript_100749.nic	chr19	+	3545	20	NIC	ENSG00000129351.17	novel	6119	20	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	537	junction_17	365.452749218497	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCGTCTTAGGCCTGGGT	NA	False	NA	10	True	AATAAA	-15	NA	10654252	10689847	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_10654488_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683136_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10687345_10687709_10688549_10688679_10689178
transcript_10076.nic	chr1	+	5161	19	NIC	ENSG00000116675.16	novel	1621	12	NA	NA	-4	-595	combination_of_known_junctions	FALSE	canonical	2	17	junction_17	4.245913067619	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGTATAAATCTAAGTT	65253419	True	NA	NA	False	ATTAAA	-12	NA	65254457	65415274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_65254650_65364634_65364786_65365884_65365935_65366047_65366197_65379401_65379525_65384192_65384327_65385711_65385907_65386811_65386930_65388335_65388416_65389255_65389450_65389546_65389628_65392430_65392866_65394897_65395033_65398812_65398882_65401760_65401881_65405869_65406134_65408640_65408784_65411249_65411427_65412923
transcript_100777.known	chr19	+	3671	18	FSM	ENSG00000129351.17	ENST00000407004.7	3671	18	0	0	0	0	multi-exon	FALSE	canonical	3	600	junction_13	256.409396369776	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGCCCTTGCGTCTT	10624931	True	NA	40	True	AATACA	-15	NA	10654327	10685765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10654488_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683124_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10684415
transcript_10078.known	chr1	+	5135	20	FSM	ENSG00000116678.20	ENST00000371060.7	5135	20	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_2	44.070329086781	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTTGTGTATTTGTCT	65417648	True	NA	13	True	TATAAA	-15	NA	65420651	65635428	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_65420741_65425302_65425379_65565545_65565606_65570472_65570803_65572325_65572450_65592656_65592866_65596447_65596594_65598659_65598805_65601391_65601683_65601842_65601961_65605037_65605238_65608752_65608902_65609946_65610107_65610213_65610297_65616007_65616225_65617963_65618147_65619927_65620024_65621352_65621459_65622905_65622982_65633151
transcript_100781.known	chr19	+	2622	18	FSM	ENSG00000129351.17	ENST00000589998.5	2622	18	0	0	0	0	multi-exon	FALSE	canonical	3	1008	junction_13	188.114832778861	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCAAAAGCCCACCTTTG	10624964	True	NA	-60	True	NA	NA	NA	10654360	10684761	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10654488_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683136_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10684415
transcript_100792.nic	chr19	+	3808	18	NIC	ENSG00000129351.17	novel	3035	17	NA	NA	-123	0	combination_of_known_junctions	FALSE	canonical	3	379	junction_1	305.729814907188	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGCCCTTGCGTCTT	10654504	False	NA	40	True	AATACA	-15	NA	10654814	10685765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_10655124_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683136_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10684415
transcript_100832.nic	chr19	+	2286	11	ISM	ENSG00000129351.17	ENST00000589998.5	2622	18	-912	3455	-812	0	5prime_fragment	FALSE	canonical	3	1093	junction_1	147.766065116454	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGATTCAGAAGA	NA	False	NA	30	True	NA	NA	NA	10653448	10681306	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_10654488_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218
transcript_100838.nic	chr19	+	1368	11	NIC	ENSG00000129351.17	novel	3866	16	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	379	junction_1	342.923446267531	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGATTCAGAAGA	10650529	True	NA	30	True	NA	NA	NA	10655002	10681306	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_10655124_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218
transcript_10084.known	chr1	+	3079	20	FSM	ENSG00000116678.20	ENST00000371059.7	3079	20	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_19	44.9367668996178	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAAAAAAATTCTCC	65417648	True	NA	NA	False	AATAAA	-10	NA	65420651	65630422	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_65420741_65425302_65425379_65565545_65565606_65570472_65570803_65572325_65572450_65592656_65592866_65596447_65596594_65598659_65598805_65601391_65601683_65601842_65601961_65605037_65605238_65608752_65608902_65609946_65610107_65610213_65610297_65616007_65616225_65617963_65618147_65619927_65620024_65621352_65621459_65622905_65622982_65630201
transcript_100842.nic	chr19	+	1473	10	ISM	ENSG00000129351.17	ENST00000589998.5	2622	18	-213	3657	-113	76	5prime_fragment	FALSE	canonical	3	1093	junction_1	137.790501204627	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAAAACCCAGTGGACT	NA	False	NA	NA	False	AAGAAA	-6	NA	10654147	10681104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_10654488_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018
transcript_10085.known	chr1	+	4541	4	FSM	ENSG00000213625.9	ENST00000371065.9	4541	4	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_3	22.647050335284	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGGCTTTTATGTACATT	65417664	True	NA	NA	False	AATAAA	-21	NA	65420667	65436007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_65420741_65425302_65425379_65429861_65430049_65431802
transcript_100850.nic	chr19	+	1442	10	NIC	ENSG00000129351.17	novel	3866	16	NA	NA	-123	76	combination_of_known_junctions	FALSE	canonical	3	379	junction_1	348.015325333047	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAAAACCCAGTGGACT	10654504	False	NA	NA	False	AAGAAA	-6	NA	10654814	10681104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_10655124_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018
transcript_100873.known	chr19	+	953	8	FSM	ENSG00000129351.17	ENST00000590009.5	953	8	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_1	390.124417621468	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAAATCCATTGGCACG	10650550	True	NA	NA	False	NA	NA	NA	10655023	10679831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10655124_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815
transcript_10089.known	chr1	+	377	3	FSM	ENSG00000213625.9	ENST00000497874.5	377	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	103.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGCTCATTTGTTTATG	65417664	True	NA	NA	False	AATAAA	-18	NA	65420667	65428009	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_65420741_65425302_65425379_65427781
transcript_100891.known	chr19	+	1329	10	FSM	ENSG00000213339.9	ENST00000250237.10	1329	10	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_6	46.4234402265616	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGTGTGTCTGTGTCTTC	10696619	True	NA	26	True	NA	NA	NA	10701438	10713365	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10701704_10701949_10702019_10702115_10702255_10707301_10707381_10707499_10707616_10712160_10712300_10712552_10712629_10712757_10712868_10712952_10713041_10713117
transcript_10090.known	chr1	+	492	3	FSM	ENSG00000213625.9	ENST00000475108.5	492	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	103	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAGGAGATGAGTTTTA	65417583	True	NA	NA	False	AAGAAA	-8	NA	65420586	65432064	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_65420741_65425302_65425379_65431802
transcript_100905.nnic	chr19	+	1292	9	NIC	ENSG00000213339.9	novel	1329	10	NA	NA	-31	0	combination_of_known_splicesites	FALSE	canonical	2	17	junction_6	149.91117161506	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGTGTGTCTGTGTCTT	NA	False	NA	25	True	NA	NA	NA	10701398	10713364	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_10701704_10701949_10702019_10702115_10702255_10707301_10707381_10707499_10707616_10712160_10712300_10712757_10712868_10712952_10713041_10713117
transcript_100906.known	chr19	+	1571	9	FSM	ENSG00000213339.9	ENST00000589488.5	1571	9	0	0	0	0	multi-exon	FALSE	canonical	3	385	junction_5	40.5322017043239	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTTTTATTGTAACTTA	10696610	True	NA	6	True	GGGGCT	-31	NA	10701429	10713345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10701704_10701949_10702019_10702115_10702255_10707301_10707381_10707499_10707616_10712160_10712629_10712757_10712868_10712952_10713041_10713117
transcript_10092.known	chr1	+	3982	10	FSM	ENSG00000184588.18	ENST00000371045.9	3982	10	0	0	0	0	multi-exon	FALSE	canonical	2	33	junction_7	6.71648055986996	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTAGGCCCACTTATTT	66331987	False	NA	19	True	AATAAA	-20	NA	66332003	66374579	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_66332621_66355526_66355621_66361614_66361794_66363167_66363267_66363406_66363572_66365666_66365767_66367695_66367851_66367942_66368066_66368786_66368970_66372312
transcript_10093.known	chr1	+	1728	15	FSM	ENSG00000198160.15	ENST00000371014.5	1728	15	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	27.5102949190046	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATGTACATTCACTGTT	66923549	True	NA	NA	False	NA	NA	NA	66924958	66986670	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_66925096_66926141_66926243_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087_66963161_66970807_66970960_66971654_66971737_66972896_66972992_66976594_66976723_66981778_66981919_66984571_66984593_66986402
transcript_10094.known	chr1	+	5456	14	FSM	ENSG00000198160.15	ENST00000401041.6	5456	14	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	28.4887603706378	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTGAGTAAGAAGTAATTT	66923580	True	NA	NA	False	ATTAAA	-17	NA	66924989	66988619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_66925096_66926141_66926243_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087_66963161_66970807_66970960_66971654_66971737_66972896_66972992_66976594_66976723_66981778_66981919_66984571
transcript_100952.known	chr19	+	2774	21	FSM	ENSG00000079805.19	ENST00000585892.5	2774	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	251.039658221565	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCGAGGGGGGCGTGCTC	10704079	True	NA	NA	False	NA	NA	NA	10718078	10831047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10718404_10759737_10759812_10772478_10772629_10775702_10775907_10777117_10777217_10782959_10783121_10786563_10786707_10793719_10793856_10795371_10795440_10796060_10796200_10798485_10798573_10802287_10802359_10805915_10805968_10808568_10808581_10812263_10812378_10819979_10820090_10823787_10823900_10825056_10825222_10829035_10829269_10830126_10830379_10830980
transcript_100960.known	chr19	+	3633	21	FSM	ENSG00000079805.19	ENST00000389253.9	3633	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	192.898807668684	1724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTGTGGGCCTCTTG	10704079	True	NA	23	True	AATAAA	-29	NA	10718078	10831903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10718404_10759737_10759812_10772478_10772629_10775702_10775907_10777117_10777217_10782959_10783121_10786563_10786707_10793719_10793856_10795371_10795440_10797379_10797519_10798485_10798573_10802287_10802359_10805915_10805968_10808568_10808581_10812263_10812378_10819979_10820090_10823787_10823900_10825056_10825222_10829035_10829269_10830126_10830379_10830977
transcript_100968.known	chr19	+	3588	20	FSM	ENSG00000079805.19	ENST00000359692.10	3588	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	271.117355583546	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGAAGACGCTGCTGGTGG	10704093	True	NA	4	True	AATAAA	-10	NA	10718092	10831884	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10718404_10759737_10759812_10772478_10772629_10775702_10775907_10777117_10777217_10782959_10783121_10786563_10786707_10793719_10793856_10795371_10795440_10796060_10796200_10798485_10798573_10802287_10802359_10805915_10805968_10812263_10812378_10819979_10820090_10823787_10823900_10825056_10825222_10829035_10829269_10830126_10830379_10830977
transcript_101007.known	chr19	+	2195	8	FSM	ENSG00000079805.19	ENST00000682524.1	2195	8	0	0	0	0	multi-exon	FALSE	canonical	3	753	junction_6	36.3228156779662	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCCTATCTCAAAAAAAAAC	10704055	True	NA	NA	False	NA	NA	NA	10718054	10794734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10718404_10759737_10759812_10772478_10772629_10775702_10775907_10777117_10777217_10782959_10783121_10786563_10786707_10793719
transcript_10101.known	chr1	+	1648	14	FSM	ENSG00000198160.15	ENST00000401042.7	1648	14	0	0	0	0	multi-exon	FALSE	canonical	2	43	junction_1	18.1228549026494	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATGTACATTCACTGTT	66930231	False	NA	NA	False	NA	NA	NA	66930242	66986670	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_66930401_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087_66963161_66970807_66970960_66971654_66971737_66972896_66972992_66976594_66976723_66981778_66981919_66984571_66984593_66986402
transcript_101010.known	chr19	-	1633	4	FSM	ENSG00000099203.7	ENST00000214869.7	1633	4	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_1	8.98146239020499	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGAGTGGCTTCCTCTGAAA	-10833037	True	NA	NA	False	AGTAAA	-15	NA	10836212	10832066	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10833214_10834933_10835118_10835255_10835354_10836008
transcript_101012.known	chr19	+	3295	16	FSM	ENSG00000142453.12	ENST00000327064.9	3295	16	0	0	0	0	multi-exon	TRUE	canonical	3	1188	junction_14	93.3319999904761	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGAAAGTAGCAGAATC	10865085	True	NA	17	True	AATAAA	-22	NA	10871552	10923075	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10871923_10904950_10905077_10908038_10908146_10909102_10909208_10912183_10912295_10913876_10914055_10916406_10916498_10916695_10916778_10919594_10919681_10919876_10919967_10920435_10920574_10920658_10920749_10920833_10920947_10921049_10921128_10921374_10921444_10921614
transcript_101016.known	chr19	+	2722	15	FSM	ENSG00000142453.12	ENST00000344150.8	2722	15	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_14	303.142554194005	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAGAAAAAG	10871679	False	NA	21	True	NA	NA	NA	10871702	10922721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10871923_10904950_10905077_10908038_10908146_10909102_10909208_10912183_10912295_10913876_10914055_10916406_10916498_10916695_10916778_10919594_10919681_10919876_10919967_10920435_10920574_10920658_10920749_10920833_10920947_10921049_10921128_10921614
transcript_101024.known	chr19	-	2111	10	FSM	ENSG00000130733.11	ENST00000586748.6	2111	10	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_9	34.231239793174	1014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTCACGTCCGTTGTGA	-10925301	True	NA	-12	True	AATAAA	-14	NA	10928639	10922192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10923175_10923271_10923408_10923494_10923678_10923832_10924000_10924075_10924193_10925685_10925774_10927629_10927717_10927798_10927960_10928379_10928441_10928510
transcript_101025.known	chr19	-	2087	10	FSM	ENSG00000130733.11	ENST00000253031.6	2087	10	0	0	0	0	multi-exon	TRUE	canonical	3	71	junction_9	82.8860589329237	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCGTTGTGACCGAGGCC	-10925343	True	NA	-4	True	AATAAA	-22	NA	10928681	10922184	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10923175_10923271_10923408_10923494_10923678_10923832_10924000_10924075_10924193_10925685_10925774_10927629_10927717_10927798_10927960_10928379_10928441_10928584
transcript_101029.nic	chr19	-	2011	9	NIC	ENSG00000130733.11	novel	2111	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_6	102.50419198745	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTCACGTCCGTTGTGA	-10925288	True	NA	-12	True	AATAAA	-14	NA	10928626	10922192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_10923175_10923271_10923408_10923494_10923678_10923832_10924000_10924075_10924193_10925685_10925774_10927798_10927960_10928379_10928441_10928510
transcript_10103.known	chr1	+	4818	13	FSM	ENSG00000198160.15	ENST00000355356.3	4818	13	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	18.8628087928483	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTTTGCTATCGATGG	66930231	False	NA	17	True	AATAAA	-18	NA	66930242	66988030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_66930401_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087_66963161_66970807_66970960_66971654_66971737_66972896_66972992_66976594_66976723_66981778_66981919_66984571
transcript_10105.known	chr1	+	3875	16	FSM	ENSG00000198160.15	ENST00000371018.7	3875	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	39.5839473636585	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTGAGTAAGAAGTAATTT	NA	False	NA	NA	False	ATTAAA	-17	NA	66924894	66988619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_66925096_66926141_66926243_66928889_66928964_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087_66963161_66970807_66970960_66971654_66971737_66972896_66972992_66976594_66976723_66981778_66981919_66984571_66984653_66986402
transcript_101050.known	chr19	-	788	6	FSM	ENSG00000130733.11	ENST00000588962.1	788	6	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_5	39.7018891238188	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATGGTGGTGAGTGTGGC	-10925212	True	NA	NA	False	NA	NA	NA	10928550	10923841	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_10924193_10925685_10925774_10927629_10927717_10927798_10927960_10928379_10928441_10928510
transcript_101054.known	chr19	+	1347	2	FSM	ENSG00000142444.7	ENST00000270502.7	1347	2	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	0	251	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTATTCTCTCTCGTTT	10926559	True	NA	31	True	AATAAA	-27	NA	10928810	10930254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10928917_10929013
transcript_101055.known	chr19	+	5675	35	FSM	ENSG00000127616.20	ENST00000642726.1	5675	35	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_29	341.129871310541	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGCCTGCAGGTGGACT	10960821	False	NA	23	True	AATAAA	-24	NA	10960931	11062279	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10961175_10984123_10984374_10985272_10985406_10986188_10986594_10986904_10987004_10987665_10987925_10989316_10989444_10991149_10991324_10994827_10995002_10996212_10996381_10996493_10996545_11003028_11003160_11003339_11003398_11007901_11008024_11010380_11010532_11012948_11013113_11018956_11019024_11019590_11019702_11021724_11021968_11023517_11023632_11024330_11024439_11025421_11025509_11026299_11026347_11027783_11027951_11030729_11030894_11033289_11033518_11034122_11034201_11034913_11035133_11039457_11039554_11041306_11041561_11058254_11058364_11058787_11058890_11059752_11059886_11060044_11060188_11061783
transcript_101056.known	chr19	+	5181	35	FSM	ENSG00000127616.20	ENST00000589677.5	5181	35	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	398.96032271436	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCGACATTCCAGTCTCG	10938665	True	NA	NA	False	NA	NA	NA	10961104	11061816	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10961175_10983479_10983712_10984123_10984374_10985272_10985406_10986188_10986594_10986904_10987004_10987665_10987925_10989316_10989444_10991149_10991324_10994827_10995002_10996212_10996381_10996493_10996545_11003028_11003160_11003339_11003398_11007901_11008024_11010380_11010532_11012948_11013113_11018956_11019024_11019590_11019702_11021724_11021968_11023517_11023632_11024330_11024439_11025421_11025509_11026299_11026347_11027783_11027951_11030729_11030894_11033289_11033518_11034122_11034201_11034913_11035133_11041297_11041561_11058257_11058364_11058787_11058890_11059752_11059886_11060044_11060188_11061783
transcript_101058.known	chr19	+	5554	34	FSM	ENSG00000127616.20	ENST00000647230.1	5554	34	0	0	0	0	multi-exon	FALSE	canonical	3	708	junction_1	186.791575681662	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCTTGCCTGCAGGTGG	10960846	False	NA	20	True	AATAAA	-21	NA	10960956	11062276	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10961175_10984120_10984374_10985272_10985406_10986188_10986594_10986904_10987004_10987665_10987925_10989316_10989444_10991149_10991324_10994827_10995002_10996212_10996381_10996493_10996545_11003028_11003160_11003339_11003398_11007901_11008024_11010380_11010532_11012948_11013113_11018956_11019024_11019590_11019702_11021724_11021968_11023517_11023632_11024330_11024439_11025421_11025509_11026299_11026347_11027783_11027951_11030729_11030894_11033289_11033518_11034122_11034201_11034913_11035133_11041306_11041561_11058254_11058364_11058787_11058890_11059752_11059886_11060044_11060188_11061783
transcript_101060.known	chr19	+	5457	34	FSM	ENSG00000127616.20	ENST00000645460.1	5457	34	0	0	0	0	multi-exon	FALSE	canonical	3	401	junction_1	238.507218541918	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGCACAGCCTTGCCTGCA	10938603	True	NA	15	True	AATAAA	-16	NA	10961042	11062271	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10961175_10984123_10984374_10985272_10985406_10986188_10986594_10986904_10987004_10987665_10987925_10989316_10989444_10991149_10991324_10994827_10995002_10996212_10996381_10996493_10996545_11003028_11003160_11003339_11003398_11007901_11008024_11010380_11010532_11012948_11013113_11018956_11019024_11019590_11019702_11021724_11021968_11023517_11023632_11024330_11024439_11025421_11025509_11026299_11026347_11027783_11027951_11030729_11030894_11033289_11033518_11034122_11034201_11034913_11035133_11041306_11041561_11058257_11058364_11058787_11058890_11059752_11059886_11060044_11060188_11061783
transcript_10109.nic	chr1	+	888	8	ISM	ENSG00000198160.15	ENST00000371014.5	1728	15	-47	23511	17	3081	5prime_fragment	FALSE	canonical	3	22	junction_1	30.0448644122589	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGGTTATTAGTAAAGTT	NA	False	NA	NA	False	AAGAAA	-9	NA	66924911	66963159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_66925096_66926141_66926243_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087
transcript_101097.nic	chr19	+	2212	10	ISM	ENSG00000127616.20	ENST00000642628.1	5637	35	-206	65887	-181	10072	5prime_fragment	FALSE	canonical	3	708	junction_1	166.010783525991	3406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGGTGTGCTGGGCCTGGC	NA	False	NA	51	True	AAAAAG	-15	NA	10960750	10996376	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_10961175_10984120_10984374_10985272_10985406_10986188_10986594_10986904_10987004_10987665_10987925_10989316_10989444_10991149_10991324_10994827_10995002_10996212
transcript_101104.nic	chr19	+	2140	10	ISM	ENSG00000127616.20	ENST00000643549.1	5609	35	-112	65828	-112	10072	5prime_fragment	FALSE	canonical	3	401	junction_1	252.40795902225	1881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGGTGTGCTGGGCCTGGC	10960809	False	NA	51	True	AAAAAG	-15	NA	10960819	10996376	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_10961175_10984123_10984374_10985272_10985406_10986188_10986594_10986904_10987004_10987665_10987925_10989316_10989444_10991149_10991324_10994827_10995002_10996212
transcript_101107.nic	chr19	+	2239	10	ISM	ENSG00000127616.20	ENST00000590574.6	5739	34	-45	65897	-45	10072	5prime_fragment	FALSE	canonical	3	24	junction_1	365.473851051575	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGGTGTGCTGGGCCTGGC	10960316	False	NA	51	True	AAAAAG	-15	NA	10961275	10996376	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_10961730_10984123_10984374_10985272_10985406_10986188_10986594_10986904_10987004_10987665_10987925_10989316_10989444_10991149_10991324_10994827_10995002_10996212
transcript_10114.nic	chr1	+	845	7	ISM	ENSG00000198160.15	ENST00000401042.7	1648	14	-84	23511	-84	3081	5prime_fragment	FALSE	canonical	3	43	junction_1	18.5060050314005	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGGTTATTAGTAAAGTT	66930147	False	NA	NA	False	AAGAAA	-9	NA	66930158	66963159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_66930401_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087
transcript_101143.known	chr19	+	5739	34	FSM	ENSG00000127616.20	ENST00000590574.6	5739	34	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	265.899972216954	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCACAGCCTTGCCTGCAGG	10961198	False	NA	17	True	AATAAA	-18	NA	10961320	11062273	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_10961730_10984123_10984374_10985272_10985406_10986188_10986594_10986904_10987004_10987665_10987925_10989316_10989444_10991149_10991324_10994827_10995002_10996212_10996381_10996493_10996545_11003028_11003160_11003339_11003398_11007901_11008024_11010380_11010532_11012948_11013113_11018956_11019024_11019590_11019702_11021724_11021968_11023517_11023632_11024330_11024439_11025421_11025509_11026299_11026347_11027783_11027951_11030729_11030894_11033289_11033518_11034122_11034201_11034913_11035133_11041306_11041561_11058254_11058364_11058787_11058890_11059752_11059886_11060044_11060188_11061783
transcript_101146.known	chr19	+	3144	18	FSM	ENSG00000130164.14	ENST00000558013.5	3144	18	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_17	78.6305803494414	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCCCGAATCATGACCCA	11080803	True	NA	NA	False	NA	NA	NA	11089477	11131812	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_11089616_11100222_11100346_11102663_11102787_11105219_11105601_11106564_11106688_11107391_11107515_11110651_11110772_11111513_11111640_11113277_11113450_11113534_11113763_11116093_11116213_11116858_11116999_11120091_11120234_11120369_11120523_11123173_11123345_11128007_11128086_11129512_11129671_11131286
transcript_101165.nic	chr19	+	3812	17	NIC	ENSG00000130164.14	novel	5173	18	NA	NA	-95	-777	combination_of_known_junctions	FALSE	canonical	3	29	junction_3	77.6610222376708	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGCATGGTGCATCAGCA	NA	False	NA	NA	False	AAAACA	-9	NA	11089366	11132744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_11089616_11100222_11100346_11102663_11102787_11106564_11106688_11107391_11107515_11110651_11110772_11111513_11111640_11113277_11113450_11113534_11113763_11116093_11116213_11116858_11116999_11120091_11120234_11120369_11120523_11123173_11123345_11128007_11128086_11129512_11129671_11131280
transcript_101168.known	chr19	+	2768	17	FSM	ENSG00000130164.14	ENST00000535915.5	2768	17	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	82.9773124112851	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGGGACCAGGATGACACC	11080788	True	NA	NA	False	NA	NA	NA	11089462	11131538	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_11089616_11100222_11100346_11105219_11105601_11106564_11106688_11107391_11107515_11110651_11110772_11111513_11111640_11113277_11113450_11113534_11113763_11116093_11116213_11116858_11116999_11120091_11120234_11120369_11120523_11123173_11123345_11128007_11128086_11129512_11129671_11131280
transcript_10119.nic	chr1	+	234	3	ISM	ENSG00000198160.15	ENST00000401042.7	1648	14	27	40443	27	-2013	5prime_fragment	FALSE	canonical	3	43	junction_1	24.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTAGAAGAGGAAGAAATG	66927718	True	NA	14	True	NA	NA	NA	66930269	66946227	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_66930401_66940027_66940053_66946149
transcript_101197.known	chr19	-	833	5	FSM	ENSG00000161888.12	ENST00000592967.5	833	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	13.5462171841441	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCACTGTAGAAGGCAGAGG	-11147735	True	NA	NA	False	AAAAAG	-40	NA	11155765	11146021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11146431_11147869_11147895_11148012_11148118_11149093_11149239_11155616
transcript_101198.known	chr19	-	2315	5	FSM	ENSG00000161888.12	ENST00000592540.6	2290	5	-26	1	-1	-1	multi-exon	FALSE	canonical	3	17	junction_1	8.86002257333467	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCAGGGCCGGCCAATCA	-11147778	True	NA	-15	True	AATAAA	-22	NA	11155808	11145493	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11147290_11147817_11147895_11148012_11148118_11149093_11149239_11155616
transcript_101200.known	chr19	+	1881	3	FSM	ENSG00000130164.14	ENST00000557958.1	1881	3	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_2	7	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCGTCTCAAAAAAAAAAAAA	11080788	True	NA	NA	False	NA	NA	NA	11089462	11104268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_11089616_11100222_11100346_11102663
transcript_101201.known	chr19	-	832	5	FSM	ENSG00000161888.12	ENST00000591396.5	832	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.5944701737507	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGGCCTGGTGTGGTG	-11147734	True	NA	-38	True	ATTAAA	-1	NA	11155764	11145922	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11146280_11147817_11147895_11148012_11148118_11149093_11149239_11155616
transcript_101204.nnic	chr19	-	4301	14	NNC	ENSG00000197256.11	novel	5183	13	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	39.4062440611373	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTCTGTGTCTTTTCTTT	-11194711	True	NA	NA	False	AATAAA	-18	NA	11197596	11164269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_11166612_11169876_11169967_11170047_11170249_11172980_11173124_11174472_11174693_11175901_11175990_11176577_11176818_11178344_11178448_11178552_11178721_11192830_11192938_11193936_11194043_11194474_11194591_11195555_11195821_11197484
transcript_101206.nic	chr19	-	5467	14	NIC	ENSG00000197256.11	novel	5183	13	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	37.4096149397562	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTCTGTGTCTTTTCTTT	-11194700	True	NA	NA	False	AATAAA	-18	NA	11197585	11164269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_11166612_11169876_11169967_11170047_11170249_11172980_11173124_11174472_11174693_11175901_11175990_11176577_11176818_11178344_11178448_11178552_11178721_11192830_11194043_11194474_11194591_11195555_11195821_11196049_11196228_11197484
transcript_10121.known	chr1	-	6193	12	FSM	ENSG00000116704.8	ENST00000235345.6	6193	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	3.67929206269965	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGAGACTAATCCAGAGC	-67054040	True	NA	NA	False	AATAAA	-45	NA	67054148	66999349	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_67004449_67009084_67009168_67020368_67020448_67021534_67021603_67042235_67042329_67047264_67047368_67049781_67049851_67050432_67050505_67052011_67052080_67052770_67052858_67052955_67052990_67053810
transcript_101216.nic	chr19	-	5300	13	NIC	ENSG00000197256.11	novel	5183	13	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	31.1982905514602	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTCTGTGTCTTTTCTTT	-11194711	True	NA	NA	False	AATAAA	-18	NA	11197596	11164269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_11166612_11169876_11169967_11170047_11170249_11172980_11173124_11174472_11174693_11175901_11175990_11176577_11176818_11178344_11178448_11178552_11178721_11192830_11194043_11194474_11194591_11195555_11195821_11197484
transcript_101218.nic	chr19	-	5332	13	NIC	ENSG00000197256.11	novel	5183	13	NA	NA	-19	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_12	31.1982905514602	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTCTGTGTCTTTTCTTT	-11194682	True	NA	NA	False	AATAAA	-18	NA	11197567	11164269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_11166612_11169876_11169967_11170047_11170249_11172980_11173124_11174472_11174693_11175901_11175990_11176577_11176818_11178344_11178448_11178552_11178721_11192830_11194043_11194474_11194591_11195555_11195882_11197484
transcript_10122.known	chr1	+	3773	17	FSM	ENSG00000081985.13	ENST00000648487.1	3773	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.03100960115899	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCCAGCCTGGGCAACAG	67307780	True	NA	NA	False	GGGGCT	-16	NA	67307904	67397090	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_67307968_67313912_67314001_67320336_67320445_67321601_67321890_67326734_67326850_67328199_67328385_67329586_67329730_67330659_67330811_67338623_67338704_67350869_67351090_67367824_67368026_67372435_67372535_67372624_67372784_67379985_67380124_67386578_67386670_67390028_67390129_67395546
transcript_101220.known	chr19	-	5183	13	FSM	ENSG00000197256.11	ENST00000586659.6	5183	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	35.3799809999321	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTCTGTGTCTTTTCTTT	-11194660	True	NA	NA	False	AATAAA	-18	NA	11197545	11164269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11166612_11169876_11169967_11170047_11170249_11172980_11173124_11174472_11174693_11175901_11175990_11176577_11176818_11178344_11178448_11178552_11178721_11192830_11194043_11194474_11194591_11195621_11195821_11197484
transcript_101222.nic	chr19	-	5324	13	NIC	ENSG00000197256.11	novel	5183	13	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	39.5020217485412	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTCTGTGTCTTTTCTTT	-11194711	True	NA	NA	False	AATAAA	-18	NA	11197596	11164269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_11166612_11169876_11169967_11170047_11170249_11172980_11173124_11174472_11174693_11175901_11175990_11176577_11176818_11178344_11178472_11178552_11178721_11192830_11194043_11194474_11194591_11195555_11195821_11197484
transcript_101225.nic	chr19	-	3997	13	NIC	ENSG00000197256.11	novel	5183	13	NA	NA	-48	736	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	31.1982905514602	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGACAAATTACCCAGAAAC	-11194711	True	NA	NA	False	AAGAAA	-12	NA	11197596	11165572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_11166612_11169876_11169967_11170047_11170249_11172980_11173124_11174472_11174693_11175901_11175990_11176577_11176818_11178344_11178448_11178552_11178721_11192830_11194043_11194474_11194591_11195555_11195821_11197484
transcript_10123.known	chr1	+	4040	16	FSM	ENSG00000081985.13	ENST00000262345.5	4040	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.98885785202351	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGCGGATCATGAGGTC	NA	False	NA	NA	False	NA	NA	NA	67307363	67396900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_67307968_67320332_67320445_67321601_67321890_67326734_67326850_67328199_67328385_67329586_67329730_67330659_67330811_67338623_67338704_67350869_67351090_67367824_67368026_67372435_67372535_67372624_67372784_67379985_67380124_67386578_67386670_67390028_67390129_67395546
transcript_101232.nic	chr19	-	3841	13	NIC	ENSG00000197256.11	novel	5183	13	NA	NA	-48	580	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	31.1982905514602	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAACTAGCCAGGCGT	-11194711	True	NA	NA	False	AAGAAA	-1	NA	11197596	11165728	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_11166612_11169876_11169967_11170047_11170249_11172980_11173124_11174472_11174693_11175901_11175990_11176577_11176818_11178344_11178448_11178552_11178721_11192830_11194043_11194474_11194591_11195555_11195821_11197484
transcript_101239.nnic	chr19	-	5006	12	NIC	ENSG00000197256.11	novel	5183	13	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	32.2859127993813	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTCTGTGTCTTTTCTTT	-11194682	True	NA	NA	False	AATAAA	-18	NA	11197567	11164269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_11166612_11169876_11169967_11170047_11170249_11172980_11173124_11174472_11174693_11175901_11175990_11176577_11176818_11178344_11178448_11178552_11178721_11192830_11194043_11194474_11194591_11197484
transcript_101244.nnic	chr19	-	3703	12	NIC	ENSG00000197256.11	novel	5183	13	NA	NA	-19	736	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	32.2859127993813	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGACAAATTACCCAGAAAC	-11194682	True	NA	NA	False	AAGAAA	-12	NA	11197567	11165572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_11166612_11169876_11169967_11170047_11170249_11172980_11173124_11174472_11174693_11175901_11175990_11176577_11176818_11178344_11178448_11178552_11178721_11192830_11194043_11194474_11194591_11197484
transcript_101245.nnic	chr19	-	3547	12	NIC	ENSG00000197256.11	novel	5183	13	NA	NA	-19	580	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	32.2859127993813	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAACTAGCCAGGCGT	-11194682	True	NA	NA	False	AAGAAA	-1	NA	11197567	11165728	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_11166612_11169876_11169967_11170047_11170249_11172980_11173124_11174472_11174693_11175901_11175990_11176577_11176818_11178344_11178448_11178552_11178721_11192830_11194043_11194474_11194591_11197484
transcript_10126.known	chr1	-	6676	8	FSM	ENSG00000142864.15	ENST00000370994.8	6676	8	0	0	0	0	multi-exon	FALSE	canonical	3	1979	junction_5	929.55161453339	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTATATTGAATTCTTT	-67331859	True	NA	-6	True	AGTAAA	-21	NA	67430415	67407809	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_67413264_67415165_67415340_67420008_67420187_67424199_67424278_67424887_67424960_67425082_67425224_67426134_67426286_67429987
transcript_101268.known	chr19	-	3152	4	FSM	ENSG00000130158.14	ENST00000585609.1	3152	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	4.54606056566195	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAGCCAGACGTGGTGGC	-11260636	True	NA	NA	False	AAAACA	-28	NA	11262481	11247257	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11248152_11250873_11252959_11253638_11253727_11262396
transcript_101269.known	chr19	+	1049	11	FSM	ENSG00000183401.12	ENST00000458408.6	1049	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	5.5937465083788	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGACTGTTAGTCTTGC	11346260	True	NA	6	True	AATAAA	-21	NA	11346518	11354944	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_11346628_11349653_11349688_11349937_11350027_11350117_11350200_11350807_11351004_11351905_11351974_11352056_11352134_11353450_11353573_11353791_11353875_11354579_11354697_11354872
transcript_10127.known	chr1	-	6681	8	FSM	ENSG00000142864.15	ENST00000361219.11	6681	8	0	0	0	0	multi-exon	FALSE	canonical	3	2021	junction_5	918.423449533526	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTATATTGAATTCTTT	-67331846	True	NA	-6	True	AGTAAA	-21	NA	67430402	67407809	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_67413264_67415165_67415340_67420008_67420187_67424199_67424278_67424887_67424978_67425082_67425224_67426134_67426286_67429987
transcript_101273.known	chr19	-	4240	5	FSM	ENSG00000105514.8	ENST00000222120.8	4240	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	15.4333243340507	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTTGTGCTTTTATTTC	-11331649	False	8008	-25	True	AAGAAA	-24	NA	11339657	11322067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11325586_11335446_11335572_11335664_11335784_11337171_11337461_11339468
transcript_101276.known	chr19	-	628	4	FSM	ENSG00000105518.14	ENST00000591677.5	628	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	286.462330275146	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCGCACCACAGCTGCCAT	-11338297	True	NA	NA	False	NA	NA	NA	11346305	11343063	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11343121_11345251_11345416_11345519_11345629_11346007
transcript_101277.known	chr19	-	792	4	FSM	ENSG00000105518.14	ENST00000593256.6	792	4	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_3	116.878854660142	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTCTTTTTTTTTTC	-11338292	True	NA	-2	True	AATAAA	-17	NA	11346300	11342775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11343121_11345251_11345416_11345519_11345629_11346126
transcript_101278.known	chr19	-	677	4	FSM	ENSG00000105518.14	ENST00000586590.5	677	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	264.313366206773	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGCTGTCTTTTTTTTT	-11338260	True	NA	-4	True	AATAAA	-15	NA	11346268	11342777	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11343121_11345251_11345416_11345519_11345629_11346207
transcript_101279.known	chr19	-	1003	4	FSM	ENSG00000105518.14	ENST00000586956.5	1003	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	288.818666678977	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGCTGTCTTTTTTTTT	-11338277	True	NA	-4	True	AATAAA	-15	NA	11346285	11342777	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11343121_11345251_11345416_11345519_11345738_11346007
transcript_10128.known	chr1	-	1621	8	FSM	ENSG00000142864.15	ENST00000370990.5	1621	8	0	0	0	0	multi-exon	FALSE	canonical	3	1303	junction_4	1230.14789222056	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTTTCACTTCATTTG	-67331816	True	NA	NA	False	AATATA	-24	NA	67430372	67412866	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_67413264_67415165_67415340_67420008_67420187_67424199_67424323_67424887_67424960_67425082_67425224_67426134_67426286_67429987
transcript_101280.known	chr19	-	840	4	FSM	ENSG00000105518.14	ENST00000588560.5	840	4	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_3	231.799242640887	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAAATGGCTGCTGTCTT	-11338240	True	NA	-11	True	AATAAA	-8	NA	11346248	11342784	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11343121_11345251_11345416_11345519_11345738_11346126
transcript_101281.known	chr19	-	788	4	FSM	ENSG00000105518.14	ENST00000589555.5	788	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	285.991064351474	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCTGCTGTCTTTTTTTT	-11338263	True	NA	-5	True	AATAAA	-14	NA	11346271	11342778	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11343121_11345251_11345416_11345519_11345738_11346207
transcript_101289.known	chr19	-	593	3	FSM	ENSG00000105518.14	ENST00000586218.5	593	3	0	0	0	0	multi-exon	TRUE	canonical	2	18	junction_2	299	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTCTTTTTTTTTTC	-11338202	True	NA	-2	True	AATAAA	-17	NA	11346210	11342775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11343121_11345251_11345416_11346126
transcript_10129.known	chr1	-	3482	8	FSM	ENSG00000142864.15	ENST00000370995.6	3482	8	0	0	0	0	multi-exon	FALSE	canonical	3	1303	junction_4	1222.76144485358	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAATCAAATAGGATC	-67331830	True	NA	-32	True	AATAAA	-34	NA	67430386	67411037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_67413264_67415165_67415340_67420008_67420187_67424199_67424323_67424887_67424978_67425082_67425224_67426134_67426286_67429987
transcript_101291.known	chr19	-	1256	3	FSM	ENSG00000105518.14	ENST00000354882.10	1256	3	0	0	0	0	multi-exon	FALSE	canonical	3	616	junction_1	8.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGCTGTCTTTTTTTTT	-11338260	True	NA	-4	True	AATAAA	-15	NA	11346268	11342777	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11343121_11345251_11345416_11345519
transcript_101292.known	chr19	-	1310	2	FSM	ENSG00000105518.14	ENST00000588321.1	1310	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCTGCATGCTAATAAATG	-11338248	True	NA	-36	True	NA	NA	NA	11346256	11342809	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11343101_11345237
transcript_101295.known	chr19	+	2727	10	FSM	ENSG00000105520.11	ENST00000251473.9	2727	10	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_8	7.76029781788188	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGCCATCTGCCTTCCT	11355127	False	NA	31	True	AATAAA	-44	NA	11355385	11365698	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_11355573_11356801_11356977_11357659_11357740_11359531_11359721_11359820_11359957_11361216_11361489_11362512_11362690_11363712_11363820_11364160_11364213_11364346
transcript_101296.nic	chr19	+	2737	10	FSM	ENSG00000105520.11	ENST00000688289.1	2697	10	-44	4	2	-4	multi-exon	FALSE	canonical	3	12	junction_8	12.4494037737149	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGTTTGGCCATCTGCCT	11355129	False	NA	27	True	AATAAA	-40	NA	11355387	11365694	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_11355573_11356801_11356977_11357659_11357740_11359531_11359721_11359820_11359957_11361216_11361489_11362512_11362690_11363712_11363836_11364160_11364213_11364346
transcript_101297.known	chr19	+	2552	10	FSM	ENSG00000105520.11	ENST00000591608.2	2556	10	0	4	0	-4	multi-exon	FALSE	canonical	3	12	junction_8	15.4416464292006	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGTTTGGCCATCTGCCT	11354578	True	NA	27	True	AATAAA	-40	NA	11355497	11365694	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_11355573_11356801_11356977_11357659_11357740_11359606_11359721_11359820_11359957_11361216_11361489_11362512_11362690_11363712_11363836_11364160_11364213_11364346
transcript_101302.known	chr19	+	1662	2	FSM	ENSG00000173928.4	ENST00000312423.4	1662	2	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	11373451	True	NA	NA	False	NA	NA	NA	11374706	11376951	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_11374930_11375512
transcript_101303.known	chr19	-	682	3	FSM	ENSG00000267277.2	ENST00000590399.2	687	3	0	5	0	-5	multi-exon	FALSE	canonical	1	1	junction_1	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAACAGACGGGGGTCTCA	-11374555	False	434	NA	False	AATATA	-16	NA	11374935	11368122	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11368296_11371687_11371872_11374610
transcript_101320.known	chr19	-	2278	19	FSM	ENSG00000205517.13	ENST00000393423.7	2278	19	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_4	42.260837604829	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAGAGGCCACTGTGCTG	-11417774	True	NA	NA	False	NA	NA	NA	11419328	11394324	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11394521_11397243_11397359_11397444_11397598_11399854_11399970_11400039_11400109_11400201_11400298_11402010_11402133_11402214_11402248_11402454_11402542_11402649_11402707_11405146_11405232_11405322_11405427_11406418_11406635_11406721_11406865_11415936_11416149_11416613_11416668_11416835_11417060_11418670_11418785_11419245
transcript_101339.nic	chr19	-	2449	18	NIC	ENSG00000205517.13	novel	2511	19	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_17	30.3761880881747	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGTCAGTCTTGTTTAT	-11418603	False	1554	-5	True	NA	NA	NA	11418627	11394059	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_11394521_11397243_11397359_11397444_11397598_11399854_11399952_11400039_11400109_11400201_11400298_11402010_11402133_11402214_11402248_11402454_11402542_11402649_11402707_11405146_11405232_11405322_11405427_11406418_11406635_11406721_11406865_11415936_11416149_11416613_11416668_11416835_11417060_11418506
transcript_101363.nic	chr19	-	2638	18	ISM	ENSG00000205517.13	ENST00000380456.8	2511	19	-7	2603	-4	581	5prime_fragment	FALSE	canonical	3	38	junction_17	36.1431218839155	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGTCCACGGACAAGTGA	-11417767	True	NA	NA	False	TTTAAA	-19	NA	11419321	11396662	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_11397359_11397444_11397598_11399854_11399952_11400039_11400109_11400201_11400298_11402010_11402133_11402214_11402248_11402454_11402542_11402649_11402707_11405146_11405232_11405322_11405427_11406418_11406635_11406721_11406865_11415936_11416149_11416613_11416668_11416835_11417060_11418670_11418785_11419245
transcript_101450.known	chr19	-	1850	9	FSM	ENSG00000187266.14	ENST00000586890.5	1850	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	30.739835718494	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTGTCTGCCCAATCC	-11383904	True	NA	NA	False	NA	NA	NA	11384284	11377873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11378596_11378690_11378779_11380883_11380972_11381055_11381210_11381691_11381850_11381929_11382106_11382846_11382983_11383096_11383233_11384092
transcript_101455.known	chr19	-	2411	8	FSM	ENSG00000187266.14	ENST00000222139.11	2411	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_6	14.9516226680639	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATGTTCTAAGAAAGTAC	-11383934	True	NA	NA	False	AATAAA	-17	NA	11384314	11377206	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11378596_11378690_11378779_11380883_11380972_11381055_11381210_11381691_11381850_11381929_11382106_11383096_11383233_11384092
transcript_101478.known	chr19	-	771	3	FSM	ENSG00000205517.13	ENST00000568420.1	771	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	12.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGGAGGCCGAGGCAGG	-11417751	True	NA	NA	False	NA	NA	NA	11419305	11416462	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11417060_11418670_11418785_11419245
transcript_101481.nic	chr19	-	1554	2	ISM	ENSG00000205517.13	ENST00000568420.1	771	3	-76	-246	-53	-178	intron_retention	FALSE	canonical	3	63	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACCAGGAGTCATATTCT	-11419357	False	403	NA	False	NA	NA	NA	11419381	11416216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_11417060_11418670
transcript_101493.nic	chr19	+	2440	18	NIC	ENSG00000130175.10	novel	2096	18	NA	NA	-14	0	intron_retention	FALSE	canonical	3	485	junction_11	145.584373091968	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTCTGTGTCTGCCTCGC	NA	False	NA	18	True	AATAAA	-19	NA	11435269	11450968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_11435707_11436040_11436197_11436388_11436506_11437875_11437972_11438066_11438125_11441239_11441358_11442385_11442516_11445388_11445474_11446271_11446351_11447073_11447161_11447438_11447598_11447692_11447790_11448221_11448292_11448539_11448630_11448913_11448989_11449075_11449176_11449265_11449429_11450645
transcript_101500.known	chr19	+	2096	18	FSM	ENSG00000130175.10	ENST00000677123.1	2096	18	0	0	0	0	multi-exon	TRUE	canonical	3	261	junction_11	193.48377792037	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTCTGTGTCTGCCTCGC	11413586	True	NA	18	True	AATAAA	-19	NA	11435634	11450968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_11435707_11436040_11436197_11436388_11436506_11437875_11437972_11438066_11438125_11441239_11441358_11442385_11442516_11445388_11445474_11446271_11446351_11447073_11447161_11447438_11447619_11447692_11447790_11448221_11448292_11448539_11448630_11448913_11448989_11449075_11449176_11449265_11449429_11450645
transcript_101507.known	chr19	+	2063	18	FSM	ENSG00000130175.10	ENST00000591462.6	2063	18	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_11	213.590576234195	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTGTCTGTGTCTGCCT	11413586	True	NA	15	True	AATAAA	-16	NA	11435634	11450965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_11435707_11436040_11436197_11436388_11436506_11437875_11437972_11438066_11438125_11441239_11441358_11442385_11442516_11445388_11445474_11446271_11446351_11447073_11447161_11447438_11447619_11447722_11447790_11448221_11448292_11448539_11448630_11448913_11448989_11449075_11449176_11449265_11449429_11450645
transcript_101528.known	chr19	-	2123	13	FSM	ENSG00000198003.12	ENST00000356392.9	2123	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	46.118431480507	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGGGTATTCATCTGTT	-11435100	False	NA	-8	True	AATAAA	-15	NA	11435121	11420604	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11420948_11421127_11421213_11421676_11421833_11422470_11422628_11422700_11422862_11423876_11424030_11426143_11426267_11426445_11426572_11426682_11426785_11426872_11427041_11430698_11430777_11430898_11431021_11434772
transcript_101537.nic	chr19	-	2121	9	NIC	ENSG00000161914.10	novel	2154	9	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	8.87411967464942	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTTCCCCTAGGCCTGA	-11505538	True	NA	-19	True	ATTAAA	-16	NA	11505842	11483426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_11483860_11484079_11484142_11485655_11485771_11486768_11486881_11486986_11487159_11487291_11487904_11495949_11496166_11498295_11498340_11505487
transcript_101539.known	chr19	-	2154	9	FSM	ENSG00000161914.10	ENST00000293771.10	2154	9	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_5	6.31961232988227	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCCTTCCCCTAGGCCT	-11505535	True	NA	-21	True	ATTAAA	-14	NA	11505839	11483428	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11483860_11484041_11484142_11485655_11485771_11486768_11486881_11486986_11487159_11487291_11487904_11495949_11496166_11498295_11498340_11505487
transcript_101542.known	chr19	-	2016	8	FSM	ENSG00000161914.10	ENST00000590548.5	2016	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	6.47759088500265	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACCTGACCACTGACCGC	-11505517	True	NA	NA	False	NA	NA	NA	11505821	11483681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11483860_11484041_11484142_11485655_11485771_11486768_11486881_11486986_11487904_11495949_11496166_11498295_11498340_11505487
transcript_101550.known	chr19	-	1647	8	FSM	ENSG00000130159.15	ENST00000270517.12	1647	8	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_4	34.2755937443921	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCAGTTTCCATTCTTGG	-11525897	True	NA	-12	True	AATAAA	-31	NA	11529134	11505928	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11506429_11507456_11507563_11507701_11507851_11507990_11508049_11513055_11513280_11513803_11514222_11519074_11519194_11529061
transcript_101554.nic	chr19	-	1558	7	FSM	ENSG00000130159.15	ENST00000585318.6	1510	7	-32	-16	8	0	multi-exon	FALSE	canonical	3	40	junction_6	106.841003364813	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCAGTTTCCATTCTTGG	-11525927	True	NA	-12	True	AATAAA	-31	NA	11529164	11505928	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11506429_11507456_11507563_11507701_11507851_11507990_11508049_11513055_11513280_11513803_11514222_11529061
transcript_101556.known	chr19	-	1501	7	FSM	ENSG00000130159.15	ENST00000252440.11	1501	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	111.038156604936	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCAGTTTCCATTCTTGG	-11525900	True	NA	-12	True	AATAAA	-31	NA	11529137	11505928	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11506429_11507456_11507563_11507990_11508049_11513055_11513280_11513803_11514222_11519074_11519194_11529061
transcript_101558.known	chr19	-	970	6	FSM	ENSG00000130159.15	ENST00000417981.6	970	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	122.879778645634	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGAATCTGCAGGCGCCT	-11525935	True	NA	-85	True	NA	NA	NA	11529172	11506001	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11506429_11507456_11507563_11507701_11507851_11507990_11508049_11519074_11519194_11529061
transcript_101562.known	chr19	-	818	5	FSM	ENSG00000130159.15	ENST00000588998.5	818	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	154.156373530257	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCAGTTTCCATTCTTGG	-11525859	True	NA	-12	True	AATAAA	-31	NA	11529096	11505928	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11506429_11507456_11507563_11507990_11508049_11519074_11519194_11529061
transcript_101566.known	chr19	+	1499	7	FSM	ENSG00000130176.8	ENST00000252456.7	1499	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	7.85281265959316	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGGCCTCAGAGCTGCTC	11537888	True	NA	16	True	AATAAA	-16	NA	11538850	11550323	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_11538991_11541075_11541198_11546674_11546742_11546831_11546970_11547796_11547908_11549322_11549470_11549549
transcript_101567.nic	chr19	+	1509	7	NIC	ENSG00000130176.8	novel	565	5	NA	NA	-22	0	intron_retention	FALSE	canonical	3	15	junction_1	22.6672794034828	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGGCCTCAGAGCTGCTC	11539693	True	NA	16	True	AATAAA	-16	NA	11539871	11550323	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_11540022_11541075_11541198_11546674_11546742_11546831_11546970_11547796_11547908_11549322_11549470_11549549
transcript_101570.known	chr19	-	658	4	FSM	ENSG00000130165.10	ENST00000586120.5	658	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	335.142092584954	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTGTGAGTGAGTGTGG	-11550889	False	NA	NA	False	NA	NA	NA	11554794	11553563	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11553811_11554010_11554082_11554231_11554366_11554588
transcript_101571.known	chr19	-	679	4	FSM	ENSG00000130165.10	ENST00000591674.5	679	4	0	0	0	0	multi-exon	FALSE	canonical	1	21	junction_3	326.662244868032	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGTCACTGGGGTGGCC	-11551810	False	NA	NA	False	NA	NA	NA	11555715	11553530	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11553811_11554010_11554082_11554231_11554366_11555521
transcript_101572.known	chr19	-	1019	4	FSM	ENSG00000130165.10	ENST00000252445.7	1019	4	0	0	0	0	multi-exon	FALSE	canonical	3	558	junction_3	74.253320165199	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTCCGTGATGTCTT	-11555331	True	NA	-13	True	AATAAA	-18	NA	11559236	11553042	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11553811_11554010_11554082_11554231_11554366_11559190
transcript_101574.known	chr19	-	1630	7	FSM	ENSG00000102575.13	ENST00000218758.9	1630	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	12.0508183216835	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGCCACTGGTGTGTTA	-11578335	True	NA	0	True	AATAAA	-22	NA	11578985	11574659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11575253_11576242_11576589_11576715_11576844_11577056_11577318_11577592_11577680_11578584_11578658_11578843
transcript_101576.nic	chr19	-	1806	6	ISM	ENSG00000102575.13	ENST00000218758.9	1630	7	10	0	1	0	intron_retention	FALSE	canonical	3	13	junction_5	10.1074230147946	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGCCACTGGTGTGTTA	-11578325	True	NA	0	True	AATAAA	-22	NA	11578975	11574659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_11575253_11576242_11576589_11576715_11576844_11577056_11577318_11577592_11577680_11578584
transcript_101577.known	chr19	-	1527	6	FSM	ENSG00000102575.13	ENST00000412435.6	1527	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	11.1247471881387	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTCAATAAAAGAATAGTTG	-11578336	True	NA	-31	True	NA	NA	NA	11578986	11574690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11575253_11576242_11576589_11576715_11576844_11577056_11577318_11577592_11577680_11578843
transcript_101579.known	chr19	+	591	5	FSM	ENSG00000198551.10	ENST00000587939.5	591	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	26.7149302825218	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAACAAGAAAACTCCTGG	11594986	True	NA	NA	False	AAGAAA	-27	NA	11597461	11616773	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_11597631_11604209_11604365_11614526_11614654_11614826_11614888_11616694
transcript_10158.known	chr1	+	1352	4	FSM	ENSG00000116717.13	ENST00000370986.9	1352	4	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_2	13.490737563232	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTATTGTGTGCTCTTG	67683469	True	NA	12	True	AATAAA	-22	NA	67685200	67688334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_67685539_67686024_67686127_67686349_67686588_67687660
transcript_101583.known	chr19	+	2803	4	FSM	ENSG00000198551.10	ENST00000361113.10	2803	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	6.18241233033047	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGTGCTCAGAAGAATTT	11595007	True	NA	39	True	CATAAA	-23	NA	11597482	11619161	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_11597631_11614526_11614654_11614826_11614888_11616694
transcript_101584.known	chr19	-	2396	4	FSM	ENSG00000197933.13	ENST00000341191.11	2396	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	1.69967317119759	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGATTGCTTTTGTTTTGTG	-11738506	True	NA	-3	True	ATTAAA	-18	NA	11738946	11721264	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_11723343_11724193_11724255_11725200_11725328_11738816
transcript_101585.known	chr19	+	4215	4	FSM	ENSG00000171295.13	ENST00000304060.10	4215	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGAGGCGTGGTCTCAG	11813260	True	NA	NA	False	AATACA	-6	NA	11814272	11835216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_11814451_11830282_11830410_11830616_11830678_11831367
transcript_101589.known	chr19	+	2385	1	FSM	ENSG00000171291.9	ENST00000592495.1	2385	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAAAAGAAGAA	11848180	True	NA	NA	False	NA	NA	NA	11848725	11851110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_11848700_11851100
transcript_101590.known	chr19	+	2574	4	FSM	ENSG00000171291.9	ENST00000682736.1	2574	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	5.09901951359278	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTATAATGTTACATTGTT	11848180	True	NA	NA	False	AATAAA	-30	NA	11848725	11869486	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_11848931_11866204_11866332_11866536_11866598_11867305
transcript_101593.known	chr19	+	2441	4	FSM	ENSG00000198429.10	ENST00000429654.7	2441	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	2.05480466765633	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAGATAAAACCACAAAGAT	11885017	True	NA	NA	False	NA	NA	NA	11887781	11906696	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_11887987_11903572_11903700_11903904_11903966_11904648
transcript_1016.nnic	chr1	+	2465	17	NNC	ENSG00000197785.14	novel	2481	16	NA	NA	-68	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	135.012036500454	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCCTGTCTGTCTCTTGG	1512082	False	NA	28	True	AATAAA	-18	NA	1512093	1534685	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_1512228_1512311_1512474_1516011_1516089_1517310_1517413_1517715_1517776_1518920_1518991_1520140_1520307_1520547_1520618_1522743_1522900_1523510_1523568_1523838_1523965_1524272_1524398_1525239_1525292_1526460_1526532_1527694_1527863_1529222_1529332_1533925
transcript_101600.known	chr19	+	569	4	FSM	ENSG00000198429.10	ENST00000445911.5	569	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	10.8012344973464	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAAAAGCCTTCAGATAT	11885053	True	NA	NA	False	NA	NA	NA	11887817	11904902	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_11887987_11903614_11903700_11903904_11903966_11904648
transcript_101603.known	chr19	+	2843	4	FSM	ENSG00000196757.8	ENST00000254321.10	2843	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	8.17856276425687	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAAGCTTATAATGTTAC	11924053	True	NA	23	True	AATAAA	-25	NA	11925106	11950763	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_11925274_11947180_11947308_11947513_11947575_11948275
transcript_101604.known	chr19	+	2621	4	FSM	ENSG00000197054.12	ENST00000343949.9	2621	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.29983164553722	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	11964817	True	NA	NA	False	NA	NA	NA	11965053	11980381	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_11965212_11977028_11977165_11977370_11977432_11978115
transcript_101612.known	chr19	-	2338	5	FSM	ENSG00000197647.13	ENST00000419886.7	2338	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	9.12414379544733	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCAGTTGAGAAATCCGT	-12035439	True	NA	-4	True	AATAAA	-29	NA	12035688	12014715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12016667_12017875_12017937_12018165_12018293_12034827_12034875_12035536
transcript_101615.nnic	chr19	-	2661	5	Fusion	ENSG00000242615.1_ENSG00000257591.6	novel	1702	4	NA	NA	-14	0	intron_retention	FALSE	canonical	0	0	junction_1	18.0468141232739	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTTTCTTTTAGATTA	-12154189	True	NA	-6	True	AATAAA	-15	NA	12156748	12142089	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr19_-_12143270_12145124_12146225_12147394_12147456_12147675_12147803_12156555
transcript_101619.nnic	chr19	-	3217	5	Fusion	ENSG00000242615.1_ENSG00000257591.6	novel	1702	4	NA	NA	-14	0	intron_retention	FALSE	non_canonical	0	0	junction_1	18.0468141232739	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTTTCTTTTAGATTA	-12154189	True	NA	-6	True	AATAAA	-15	NA	12156748	12142089	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr19_-_12143709_12145007_12146225_12147394_12147456_12147675_12147803_12156555
transcript_101621.known	chr19	+	523	4	FSM	ENSG00000219665.8	ENST00000589551.1	523	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	52.332271751441	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGGAGAATCGCTTGAAC	11985594	True	NA	NA	False	NA	NA	NA	11987766	12003595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_11987824_11990168_11990382_12001773_12001823_12003391
transcript_101624.known	chr19	+	1994	4	FSM	ENSG00000214189.9	ENST00000430298.7	1994	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	33.9411254969543	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTATGAATGTAAACAGTGT	12088274	False	NA	NA	False	NA	NA	NA	12092467	12113048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12092471_12110304_12110432_12110633_12110695_12111245
transcript_101627.known	chr19	+	686	4	FSM	ENSG00000214189.9	ENST00000596883.2	686	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	42.026446699932	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGCGCCTCAGAACTTCA	12088193	False	NA	NA	False	NA	NA	NA	12092386	12111660	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12092471_12093835_12093896_12110304_12110432_12111245
transcript_101629.known	chr19	-	1756	4	FSM	ENSG00000257446.4	ENST00000547628.2	1756	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	2.16024689946929	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTCTATGGATGTAAGCA	-12051768	True	NA	NA	False	NA	NA	NA	12052961	12043804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12045210_12046367_12046429_12046633_12046761_12052798
transcript_10163.known	chr1	-	4395	4	FSM	ENSG00000172380.6	ENST00000370982.4	4395	4	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_2	24.9042611258038	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTCCCCTTTCCCTT	-67831555	True	NA	-16	True	AATAAA	-15	NA	67833467	67701474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_67705577_67707593_67707713_67777457_67777508_67833343
transcript_101631.known	chr19	-	642	4	FSM	ENSG00000132010.16	ENST00000418866.1	642	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	8.17856276425687	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGAATGTACAGAAACCT	-12139154	True	NA	NA	False	GATAAA	-30	NA	12140315	12133667	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12133986_12135499_12135561_12135768_12135896_12140179
transcript_101633.nic	chr19	+	3504	3	NIC	ENSG00000214189.9	novel	1994	4	NA	NA	-16	1350	combination_of_known_junctions	FALSE	canonical	3	100	junction_2	11.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTATTTCAGATATTA	12088053	True	NA	9	True	ATTAAA	-18	NA	12092246	12114398	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_12092471_12110304_12110432_12111245
transcript_101634.nic	chr19	+	3784	3	NIC	ENSG00000214189.9	novel	1994	4	NA	NA	-16	1630	combination_of_known_junctions	FALSE	canonical	3	100	junction_2	11.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGGAATTTTGAGTGTTT	12088053	True	NA	-68	True	AAAAAG	-15	NA	12092246	12114678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_12092471_12110304_12110432_12111245
transcript_101642.known	chr19	+	622	3	FSM	ENSG00000219665.8	ENST00000489336.5	622	3	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_2	1.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTTTCAGGCTCTTTA	11985498	True	NA	4	True	AATAAA	-20	NA	11987670	12003811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_11987824_12001773_12001823_12003391
transcript_101643.known	chr19	+	1257	3	FSM	ENSG00000219665.8	ENST00000406892.6	1257	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	61.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGGCTCTGTGATTTCA	11985444	True	NA	NA	False	ATTAAA	-15	NA	11987616	12027194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_11987824_12001773_12001823_12026193
transcript_101644.known	chr19	+	607	4	FSM	ENSG00000219665.8	ENST00000476474.5	607	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	57.28874234961	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGTTTCTTATGCTTGC	11985506	True	NA	12	True	AATAAA	-14	NA	11987678	12046275	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_11987824_12001773_12001823_12035553_12035773_12046081
transcript_101645.known	chr19	-	2322	4	FSM	ENSG00000197647.13	ENST00000344980.11	2322	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	9.2736184954957	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCAGTTGAGAAATCCGT	-12035461	True	NA	-4	True	AATAAA	-29	NA	12035710	12014715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12016667_12017875_12017937_12018165_12018302_12035536
transcript_101646.known	chr19	-	2780	5	FSM	ENSG00000197857.15	ENST00000356109.10	2780	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	13.9171656597168	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTACATAGTTGTATT	-12294112	True	NA	-1	True	ATTAAA	-21	NA	12294883	12271807	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12274064_12274972_12275034_12275955_12276083_12293231_12293376_12294691
transcript_101650.known	chr19	+	917	3	FSM	ENSG00000234773.8	ENST00000426044.1	917	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCACCCCCCCGCCCAGG	12194205	True	NA	NA	False	NA	NA	NA	12195016	12237767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12195144_12234712_12234825_12237089
transcript_101651.known	chr19	+	2042	3	FSM	ENSG00000234773.8	ENST00000415793.7	2102	3	0	60	0	-60	multi-exon	FALSE	canonical	1	1	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCAGCACCCATTTATTT	12194203	True	NA	-50	True	NA	NA	NA	12195014	12209806	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12195144_12207331_12207709_12208270
transcript_101652.known	chr19	-	2636	4	FSM	ENSG00000197857.15	ENST00000355684.6	2636	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	5.73488351136175	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTACATAGTTGTATT	-12294112	True	NA	-1	True	ATTAAA	-21	NA	12294883	12271807	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12274064_12274972_12275034_12275955_12276083_12294691
transcript_101653.known	chr19	-	958	5	FSM	ENSG00000188868.14	ENST00000595977.5	958	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	6.44204936336256	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATATACATGTAAACAGTGT	-12333052	True	NA	NA	False	NA	NA	NA	12333720	12319186	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12319312_12319429_12319834_12321271_12321333_12322584_12322712_12333479
transcript_101656.known	chr19	-	2699	4	FSM	ENSG00000188868.14	ENST00000293725.10	2699	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	3.29983164553722	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAGAAAGAAAAGACATA	-12332965	True	NA	NA	False	AAAACA	-33	NA	12333633	12317476	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12319834_12321271_12321333_12322584_12322712_12333479
transcript_101657.known	chr19	-	1906	3	FSM	ENSG00000198342.10	ENST00000438182.5	1906	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	3	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTATCCCCTAACCATATG	-12365259	True	NA	NA	False	NA	NA	NA	12365641	12349582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12351319_12352009_12352071_12365532
transcript_101659.known	chr19	+	704	5	FSM	ENSG00000173875.14	ENST00000598225.5	704	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	29.3513202428783	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGTCACACTGGAGAAAA	12607495	True	NA	NA	False	NA	NA	NA	12610919	12627982	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12611083_12612225_12612317_12623699_12623827_12624649_12624711_12627720
transcript_101660.known	chr19	+	576	5	FSM	ENSG00000173875.14	ENST00000597691.5	576	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	27.1569512280005	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTGCCGGAGTAAAACC	12607495	True	NA	NA	False	NA	NA	NA	12610919	12627805	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12611083_12612225_12612366_12623699_12623827_12624649_12624711_12627720
transcript_101663.known	chr19	-	6108	5	FSM	ENSG00000188033.10	ENST00000311437.11	6108	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	1.6393596310755	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATTGAGTTTTTCAT	-12610052	True	NA	-1	True	ATTAAA	-23	NA	12610813	12576099	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12581725_12582849_12582911_12583429_12583557_12609157_12609203_12610563
transcript_101664.known	chr19	+	6465	4	FSM	ENSG00000173875.14	ENST00000343325.9	6465	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	4.98887651569859	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTATATGGGAGTTTGTT	12607495	True	NA	NA	False	AGTAAA	-21	NA	12610919	12633834	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12611083_12623699_12623827_12624649_12624711_12627720
transcript_101668.known	chr19	-	2583	4	FSM	ENSG00000196466.10	ENST00000430385.3	2583	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	8.28653526310404	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTGCTTTTGTTTAATG	-12400556	True	NA	-1	True	ATTAAA	-22	NA	12401271	12390015	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12392207_12392602_12392664_12393296_12393424_12401067
transcript_101669.known	chr19	-	2573	4	FSM	ENSG00000180855.16	ENST00000301547.10	2573	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	2.05480466765633	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATTTCTTCTGTTTAATG	-12440422	True	NA	-1	True	ATTAAA	-22	NA	12441021	12429705	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12431981_12432376_12432438_12433070_12433198_12440911
transcript_101672.known	chr19	-	2885	4	FSM	ENSG00000249709.8	ENST00000339282.12	2885	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	4.49691252107735	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGCATTTCCATTTCT	-12549624	True	NA	-14	True	ATTAAA	-17	NA	12551482	12525372	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12527917_12528303_12528365_12528569_12528697_12551329
transcript_101674.known	chr19	+	294	2	FSM	ENSG00000173875.14	ENST00000498389.1	294	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGCTTCCTTCCTTTA	12607533	True	NA	-1	True	NA	NA	NA	12610957	12612394	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12611083_12612225
transcript_101681.known	chr19	-	3170	24	FSM	ENSG00000104774.13	ENST00000221363.8	3170	24	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_17	33.177132443933	297	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGGTCGCTCTGTGACTG	-12645769	False	20965	-23	True	ATTAAA	-16	NA	12666734	12646515	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12646733_12647232_12647336_12647442_12647599_12648174_12648403_12649135_12649217_12649340_12649429_12649912_12650015_12650103_12650223_12652152_12652271_12652362_12652461_12655693_12655880_12656570_12656688_12656948_12657057_12657445_12657556_12658062_12658142_12658223_12658345_12658427_12658508_12661259_12661377_12663316_12663463_12663702_12663836_12664791_12664986_12665351_12665526_12665702_12665806_12666542
transcript_10169.known	chr1	-	2716	12	FSM	ENSG00000116729.14	ENST00000262348.9	2716	12	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_4	3.23207069720567	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACATGCGTGCAGATTAT	-68232299	True	NA	NA	False	NA	NA	NA	68232523	68125359	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_68126336_68137779_68137934_68144568_68144653_68145868_68146013_68148135_68148200_68148562_68148661_68150187_68150357_68153516_68153654_68155098_68155261_68159122_68159248_68193954_68194228_68232193
transcript_101708.known	chr19	+	1425	11	FSM	ENSG00000123154.12	ENST00000548381.5	1425	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	59.5957213229272	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGCTCAGTCCTCGTTCT	12666006	True	NA	21	True	AATAAA	-33	NA	12666813	12675831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12666993_12668507_12668628_12669754_12669894_12669976_12670081_12670179_12670286_12670562_12670612_12670694_12670822_12672846_12672915_12673007_12673117_12673201_12673317_12675522
transcript_10171.known	chr1	-	2037	12	FSM	ENSG00000116729.14	ENST00000354777.6	2037	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	5.88175495258975	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTACTTCTCTTACATCCA	-68232321	True	NA	NA	False	AATAAA	-17	NA	68232545	68098472	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_68098754_68137779_68137934_68144568_68144653_68145868_68146013_68148135_68148200_68148562_68148661_68150187_68150357_68153516_68153654_68155098_68155261_68159122_68159248_68193954_68194222_68232193
transcript_101716.known	chr19	-	1172	9	FSM	ENSG00000095059.17	ENST00000594424.5	1172	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_8	141.151016202506	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGATGGTATCTGAAGTC	-12674209	False	NA	-28	True	NA	NA	NA	12681206	12675742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12675934_12676016_12676143_12677107_12677212_12677290_12677397_12679456_12679544_12679622_12679720_12679800_12679923_12680160_12680326_12681032
transcript_101717.known	chr19	-	1345	9	FSM	ENSG00000095059.17	ENST00000210060.12	1345	9	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_2	53.1458782503404	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTGTCTCGGTCCTTG	-12674883	True	NA	-2	True	NA	NA	NA	12681880	12675716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12675934_12676016_12676143_12677107_12677212_12677290_12677397_12679456_12679544_12679622_12679720_12679800_12679923_12680160_12680326_12681559
transcript_101721.known	chr19	-	1090	8	FSM	ENSG00000095059.17	ENST00000351660.9	1090	8	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	140.397249813171	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCATGTCTGTGTCTCGGT	-12674774	False	NA	-7	True	NA	NA	NA	12681771	12675721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12675934_12676016_12676106_12677290_12677397_12679456_12679544_12679622_12679720_12679800_12679923_12680160_12680326_12681559
transcript_101723.known	chr19	-	1133	8	FSM	ENSG00000095059.17	ENST00000601639.5	1133	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	154.503682011472	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGAAGTCCTTCCATGT	-12674810	True	NA	-19	True	NA	NA	NA	12681807	12675733	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12675934_12676016_12676143_12677107_12677212_12677290_12677397_12679456_12679544_12679622_12679720_12680160_12680326_12681559
transcript_101726.known	chr19	-	1176	8	FSM	ENSG00000095059.17	ENST00000601537.5	1176	8	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	138.044358443071	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAGCTACGTCTCTAGAA	-12674863	True	NA	-47	True	NA	NA	NA	12681860	12675761	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12675934_12676016_12676143_12677290_12677397_12679456_12679544_12679622_12679720_12679800_12679923_12680160_12680326_12681559
transcript_10173.known	chr1	-	5299	12	FSM	ENSG00000024526.17	ENST00000456315.7	5299	12	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_1	23.8226921475518	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTTTCTTGTGTCTCA	-68491496	True	NA	-9	True	ATTAAA	-17	NA	68497082	68474151	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_68477070_68477786_68477973_68479143_68479321_68481439_68481613_68482045_68482898_68483949_68484091_68486936_68486985_68488373_68488505_68488915_68489035_68489451_68489609_68494429_68494696_68496951
transcript_101733.nic	chr19	-	2415	7	NIC	ENSG00000095059.17	novel	1090	8	NA	NA	-31	0	intron_retention	FALSE	canonical	3	377	junction_6	41.811747418904	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCATGTCTGTGTCTCGGT	NA	False	NA	-7	True	NA	NA	NA	12681911	12675721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_12675934_12676016_12677397_12679456_12679544_12679622_12679720_12679800_12679923_12680160_12680326_12681559
transcript_101745.known	chr19	-	603	4	FSM	ENSG00000095059.17	ENST00000595100.1	603	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	172.407140867837	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTACTGCAAGTTTGAG	-12674841	True	NA	NA	False	NA	NA	NA	12681838	12679693	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12679720_12679800_12679923_12680149_12680326_12681559
transcript_101748.known	chr19	-	599	4	FSM	ENSG00000105583.11	ENST00000222190.9	599	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	890.462177124267	221	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTCAGCCTCTTCTGT	-12648438	True	NA	-22	True	AATAAA	-12	NA	12669403	12668074	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12668426_12668519_12668612_12669127_12669234_12669353
transcript_101750.known	chr19	-	1727	10	FSM	ENSG00000132004.13	ENST00000393261.8	1727	10	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_6	12.6178396147363	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGAGTGTGAGTGTGGTT	-12695791	True	NA	-5	True	AATAAA	-22	NA	12696631	12688915	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12689291_12689371_12689438_12689540_12689631_12689760_12689875_12689961_12690111_12691165_12691258_12691341_12691455_12694593_12694723_12694798_12694939_12696172
transcript_101762.known	chr19	-	4962	25	FSM	ENSG00000105576.16	ENST00000356861.9	4962	25	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_24	18.2595104595447	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTAGTCTGTGGCTTCC	-12722338	False	NA	-10	True	AGTAAA	-18	NA	12722355	12699200	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12701244_12701325_12701454_12701597_12701673_12701751_12701852_12702071_12702148_12702822_12702919_12703427_12703527_12703713_12703802_12705239_12705399_12705491_12705600_12705681_12705769_12706195_12706368_12706569_12706796_12710620_12710774_12711295_12711462_12711552_12711614_12714820_12714940_12715046_12715170_12715242_12715325_12715404_12715539_12715632_12715740_12719028_12719179_12719260_12719337_12720878_12720991_12722133
transcript_101770.known	chr19	-	5051	26	FSM	ENSG00000105576.16	ENST00000425528.6	5051	26	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	23.2670066832844	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTAGTCTGTGGCTTCC	-12718567	True	NA	-10	True	AGTAAA	-18	NA	12723932	12699200	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12701244_12701325_12701454_12701597_12701673_12701751_12701852_12702071_12702178_12702822_12702919_12703427_12703527_12703713_12703802_12705239_12705399_12705491_12705600_12705681_12705769_12706195_12706368_12706569_12706796_12710620_12710774_12711295_12711462_12711552_12711614_12714820_12714940_12715046_12715170_12715242_12715325_12715404_12715539_12715632_12715740_12719028_12719179_12719260_12719337_12720878_12720991_12723248_12723366_12723768
transcript_101771.known	chr19	-	879	3	FSM	ENSG00000123144.11	ENST00000242784.5	879	3	0	0	0	0	multi-exon	FALSE	canonical	3	1390	junction_2	471	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGCTTGGTTTGTCT	-12712730	True	NA	-1	True	AGTAAA	-21	NA	12734684	12730639	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12731069_12731343_12731422_12734312
transcript_101773.known	chr19	-	988	3	FSM	ENSG00000123144.11	ENST00000591254.1	988	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	1159.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGCTTGGTTTGTCT	-12712703	True	NA	-1	True	AGTAAA	-21	NA	12734657	12730639	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12731069_12731343_12731558_12734312
transcript_101775.known	chr19	+	1368	8	FSM	ENSG00000198356.12	ENST00000591090.5	1368	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	520.952424479845	751	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTGACATTGGGAG	12737104	True	NA	15	True	AATAAA	-16	NA	12737138	12748323	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12737194_12737458_12737667_12738510_12738659_12745376_12745526_12745608_12745760_12747196_12747305_12747394_12747593_12747972
transcript_101777.known	chr19	+	2011	10	FSM	ENSG00000039987.7	ENST00000553030.6	2011	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	3.01846171271247	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTTAGTCTGATTTCTC	12751381	True	NA	9	True	AATAAA	-23	NA	12751790	12758458	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12751840_12752541_12752745_12753259_12753355_12754551_12754786_12754876_12755032_12755378_12755457_12755614_12755768_12755854_12755936_12756140_12756296_12757650
transcript_101787.known	chr19	-	2547	23	FSM	ENSG00000095066.12	ENST00000678590.1	2547	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	144.151922843589	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGTGCTCTGGGCAC	-12768513	True	NA	-33	True	AATAAA	-15	NA	12775523	12763002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12763432_12763527_12763600_12763667_12763779_12764813_12764918_12764998_12765082_12765689_12765725_12765828_12765835_12765926_12766015_12766102_12766241_12767394_12767465_12767815_12767904_12768012_12768124_12769880_12770083_12770931_12771073_12771158_12771320_12771396_12771478_12772189_12772253_12772612_12772681_12772779_12772913_12772993_12773045_12774634_12774742_12774811_12774898_12775404
transcript_10179.known	chr1	-	4586	11	FSM	ENSG00000024526.17	ENST00000370966.9	4586	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	68.5248130241885	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTTTCTTGTGTCTCA	-68497204	True	NA	-9	True	ATTAAA	-17	NA	68497221	68474151	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_68477070_68477786_68477973_68479143_68479321_68481439_68481613_68483949_68484091_68486936_68486985_68488373_68488505_68488915_68489035_68489451_68489609_68494429_68494696_68496951
transcript_101804.nnic	chr19	-	2761	22	NNC	ENSG00000095066.12	novel	2542	23	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_21	85.4593298133925	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGTGCTCTGGGCAC	-12768581	True	NA	-33	True	AATAAA	-15	NA	12775591	12763002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_12763432_12763527_12763600_12763667_12763779_12764813_12764918_12764998_12765082_12765689_12765725_12765926_12766015_12766102_12766241_12767394_12767465_12767815_12767904_12768012_12768124_12769880_12770083_12770931_12771073_12771158_12771320_12771396_12771478_12772189_12772253_12772612_12772681_12772779_12772913_12772993_12773045_12774668_12774742_12774811_12774898_12775218
transcript_101805.known	chr19	-	2603	22	FSM	ENSG00000095066.12	ENST00000264827.9	2603	22	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_19	54.5200872091842	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTGTGCTCTGGGCA	-12775565	False	NA	-34	True	AATAAA	-14	NA	12775620	12763003	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12763432_12763527_12763600_12763667_12763779_12764813_12764918_12764998_12765082_12765689_12765725_12765926_12766015_12766102_12766241_12767394_12767465_12767815_12767904_12768012_12768124_12769880_12770083_12770931_12771073_12771158_12771320_12771396_12771478_12772189_12772253_12772612_12772681_12772779_12772913_12772993_12773045_12774668_12774742_12774811_12774898_12775404
transcript_10181.nic	chr1	-	2422	11	ISM	ENSG00000024526.17	ENST00000456315.7	5299	12	-50	3644	-50	-899	5prime_fragment	FALSE	canonical	3	205	junction_4	22.2036033111745	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAAACAGGTAAGAGAATG	-68497115	False	NA	NA	False	ATTAAA	-37	NA	68497132	68477795	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_68477973_68479143_68479321_68481439_68481613_68482045_68482898_68483949_68484091_68486936_68486985_68488373_68488505_68488915_68489035_68489451_68489609_68494429_68494696_68496951
transcript_10184.nic	chr1	-	2130	10	NIC	ENSG00000024526.17	novel	5299	12	NA	NA	-24	-899	intron_retention	FALSE	canonical	3	31	junction_9	70.7045670552415	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAAACAGGTAAGAGAATG	-68491520	True	NA	NA	False	ATTAAA	-37	NA	68497106	68477795	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_68477973_68479143_68479321_68481439_68481613_68482045_68482898_68483949_68484091_68486936_68486985_68488373_68488505_68488915_68489035_68489451_68489609_68496951
transcript_101840.known	chr19	-	890	3	FSM	ENSG00000095066.12	ENST00000589134.5	890	3	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_1	10.5	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCCAGTAGTTCTGTGA	-12768534	True	NA	NA	False	AAAAAG	-29	NA	12775544	12774077	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12774742_12774811_12774898_12775404
transcript_101841.known	chr19	-	403	3	FSM	ENSG00000095066.12	ENST00000592512.1	403	3	0	0	0	0	multi-exon	FALSE	canonical	2	37	junction_2	236.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTATGGAGTACTCACCCT	-12778354	False	NA	NA	False	NA	NA	NA	12778409	12774534	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12774742_12774811_12774898_12778299
transcript_101842.known	chr19	-	594	3	FSM	ENSG00000095066.12	ENST00000591641.5	594	3	0	0	0	0	multi-exon	FALSE	canonical	1	19	junction_2	245.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGAGTTCAAGACCAGCC	-12778391	True	NA	NA	False	NA	NA	NA	12778446	12774335	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12774742_12774811_12774898_12778344
transcript_101843.known	chr19	-	585	3	FSM	ENSG00000095066.12	ENST00000593143.5	585	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	255	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATTCAGCAAGGAATAACA	-12792560	False	51	NA	False	NA	NA	NA	12792582	12774501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12774742_12774811_12774898_12792323
transcript_101845.known	chr19	-	1114	2	FSM	ENSG00000095066.12	ENST00000592808.1	1114	2	0	0	0	0	multi-exon	FALSE	canonical	3	531	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATAGGGAATAGCAGATGT	-12768562	True	NA	NA	False	NA	NA	NA	12775572	12773951	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12774898_12775404
transcript_101846.known	chr19	+	1830	1	FSM	ENSG00000171223.6	ENST00000302754.6	1830	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTTGTCTTTTTTTCC	12789258	True	NA	16	True	AGTAAA	-23	NA	12791485	12793315	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12791500_12793300
transcript_101847.known	chr19	-	925	6	FSM	ENSG00000167815.12	ENST00000301522.3	925	6	0	0	0	0	multi-exon	FALSE	canonical	3	7636	junction_5	469.592589379347	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTCTGTGTTGGTGTGCT	-12745587	True	NA	-10	True	AATAAA	-17	NA	12801800	12796822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12797167_12799858_12799990_12800176_12800300_12800915_12801070_12801158_12801271_12801739
transcript_101851.known	chr19	+	1164	8	FSM	ENSG00000104889.7	ENST00000221486.6	1164	8	0	0	0	0	multi-exon	TRUE	canonical	3	827	junction_3	67.5398597352795	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTTGGTTTGATTTTT	12793372	True	NA	17	True	AATAGA	-20	NA	12806583	12813640	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12806801_12807007_12807080_12807205_12807330_12807418_12807507_12810070_12810209_12810316_12810405_12813082_12813207_12813327
transcript_101859.known	chr19	+	878	4	FSM	ENSG00000104889.7	ENST00000590121.2	878	4	0	0	0	0	multi-exon	FALSE	canonical	3	827	junction_3	86.6833317310773	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGGCTCACGGCTGTAA	12793465	True	NA	NA	False	AATAAA	-35	NA	12806676	12807976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12806801_12807007_12807080_12807205_12807330_12807418
transcript_101868.known	chr19	+	4853	26	FSM	ENSG00000105613.10	ENST00000251472.9	4853	26	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_16	14.4318536577946	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTGGGGCTCACTCCT	12837624	True	NA	23	True	AATAAA	-20	NA	12838514	12874952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12838656_12840445_12840535_12840990_12841067_12843528_12843608_12847289_12847451_12847611_12847688_12847847_12848058_12851933_12852036_12852114_12852248_12852327_12852396_12858361_12858442_12858530_12858740_12864808_12864948_12865045_12865179_12865315_12865482_12865716_12865819_12865979_12866103_12866652_12866763_12867473_12867653_12867729_12867978_12868642_12868850_12869065_12869296_12870823_12870947_12871035_12871173_12873323_12873512_12873608
transcript_101874.nic	chr19	+	1669	12	ISM	ENSG00000105613.10	ENST00000251472.9	4853	26	-63	16031	-21	0	5prime_fragment	TRUE	canonical	3	37	junction_1	8.58982677164925	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTATTTGTTTTTCAT	12837561	True	NA	15	True	NA	NA	NA	12838451	12858921	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_12838656_12840445_12840535_12840990_12841067_12843528_12843608_12847289_12847451_12847611_12847688_12847847_12848058_12851933_12852036_12852114_12852248_12852327_12852396_12858361_12858442_12858530
transcript_101880.nic	chr19	+	2875	9	ISM	ENSG00000105613.10	ENST00000251472.9	4853	26	28029	0	-2057	0	3prime_fragment	FALSE	canonical	3	28	junction_1	11.6913429510899	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTGGGGCTCACTCCT	NA	False	NA	23	True	AATAAA	-20	NA	12866543	12874952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_12866763_12867473_12867653_12867729_12867978_12868642_12868850_12869065_12869296_12870823_12870947_12871035_12871173_12873323_12873512_12873608
transcript_101882.known	chr19	-	1328	7	FSM	ENSG00000132026.15	ENST00000322912.9	1328	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	6.42261628933256	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGACGAGTGTGGCTGCTT	-12835332	False	NA	-4	True	AATAAA	-17	NA	12835416	12825481	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12825934_12826774_12826872_12828656_12828768_12828868_12828954_12829810_12829998_12834784_12834847_12835082
transcript_101886.known	chr19	+	739	3	FSM	ENSG00000267424.1	ENST00000588469.1	739	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	10	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACATGGAGGAGCGGCGA	NA	False	NA	-83	True	NA	NA	NA	12825710	12832983	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12825913_12826784_12826893_12832554
transcript_101888.nnic	chr19	+	737	3	NNC	ENSG00000267424.1	novel	739	3	NA	NA	270	105	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_1	3	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCCTGACCGTGAGGGAG	12825862	False	NA	22	True	TATAAA	-25	NA	12825980	12833088	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_12826076_12826784_12826893_12832554
transcript_101890.known	chr19	-	1938	6	FSM	ENSG00000105612.9	ENST00000222219.8	1938	6	0	0	0	0	multi-exon	TRUE	canonical	3	176	junction_2	21.5925913220252	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGCTGTTAACCTTCTCT	-12877000	True	NA	-4	True	AATAAA	-15	NA	12881449	12875208	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12876364_12878381_12878580_12878669_12878835_12880801_12880881_12880971_12881153_12881289
transcript_101894.known	chr19	-	745	5	FSM	ENSG00000105612.9	ENST00000592506.1	745	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	87.4224656481388	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAATGTGAACCAGATAGC	-12877017	True	NA	NA	False	NA	NA	NA	12881466	12876253	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12876364_12878381_12878580_12880801_12880881_12880971_12881153_12881289
transcript_101898.known	chr19	-	1613	3	FSM	ENSG00000105610.6	ENST00000264834.6	1613	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAGCGTTGGCCTGAAT	NA	False	NA	NA	False	TATAAA	-20	NA	12887201	12884421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12885061_12885316_12886143_12887053
transcript_10190.nic	chr1	-	1175	8	ISM	ENSG00000024526.17	ENST00000456315.7	5299	12	-24	8588	-24	4201	5prime_fragment	FALSE	canonical	3	205	junction_1	24.6386124708717	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAATCAGATTCTACTGA	-68491520	True	NA	NA	False	AAAACA	-3	NA	68497106	68482739	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_68482898_68483949_68484091_68486936_68486985_68488373_68488505_68488915_68489035_68489451_68489609_68494429_68494696_68496951
transcript_101902.known	chr19	+	1852	12	FSM	ENSG00000105607.13	ENST00000222214.10	1852	12	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_1	57.0316716417109	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCTGAGAAGTAGTTTCA	12885553	True	NA	38	True	NA	NA	NA	12891159	12899999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12891203_12891270_12891396_12891486_12891523_12891830_12891975_12892115_12892179_12893482_12893654_12895991_12896122_12896204_12896422_12896909_12897014_12897302_12897429_12897702_12897864_12899467
transcript_101915.nic	chr19	+	2121	11	NIC	ENSG00000105607.13	novel	1852	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	274	junction_1	59.501344522624	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAAGGTGTCAGGCCGGT	12885562	True	NA	8	True	AATAAA	-16	NA	12891168	12899969	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_12891203_12891270_12891396_12891486_12891975_12892115_12892179_12893482_12893654_12895991_12896122_12896204_12896422_12896909_12897014_12897302_12897429_12897702_12897864_12899467
transcript_101916.known	chr19	+	1730	11	FSM	ENSG00000105607.13	ENST00000585420.5	1730	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_6	138.318509245871	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAAAGGGAGGTGGCGGA	12885573	True	NA	-56	True	NA	NA	NA	12891179	12899624	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12891203_12891270_12891396_12891486_12891975_12892115_12892179_12893482_12893654_12895991_12896122_12896239_12896422_12896909_12897014_12897302_12897429_12897702_12897864_12899467
transcript_101936.known	chr19	+	791	6	FSM	ENSG00000105607.13	ENST00000587832.5	791	6	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_1	66.3403346388907	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGCCCAAAGTTTAAAGT	12885573	True	NA	NA	False	NA	NA	NA	12891179	12893882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12891203_12891270_12891396_12891486_12891523_12891830_12891975_12892115_12892179_12893482
transcript_101938.known	chr19	+	1051	5	FSM	ENSG00000105607.13	ENST00000590627.5	1051	5	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_1	73.4383244634571	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCTCTGTGACCACCGTC	12885573	True	NA	NA	False	NA	NA	NA	12891179	12893834	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12891203_12891270_12891396_12891486_12891975_12892115_12892179_12893482
transcript_10194.known	chr1	+	1247	3	FSM	ENSG00000234264.1	ENST00000428732.1	1247	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATTTCGTCAGTTTTGTA	68496651	True	NA	NA	False	ATTAAA	-20	NA	68496675	68538627	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_68496772_68529324_68529480_68537631
transcript_101940.known	chr19	+	1867	11	FSM	ENSG00000105607.13	ENST00000591470.5	1867	11	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_1	33.4789486095367	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAGACCTGCACATC	12885553	True	NA	-15	True	NA	NA	NA	12891159	12899946	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12891396_12891486_12891523_12891830_12891975_12892115_12892179_12893482_12893654_12895991_12896122_12896204_12896422_12896909_12897014_12897302_12897429_12897702_12897864_12899467
transcript_101945.known	chr19	-	1811	13	FSM	ENSG00000179115.11	ENST00000314606.9	1811	13	0	0	0	0	multi-exon	FALSE	canonical	3	1060	junction_9	81.1570836231947	1950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGGCTTTCCTTAGGG	-12924180	True	NA	-19	True	AATAAA	-18	NA	12933711	12922478	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12922887_12924150_12924266_12924448_12924527_12924638_12924808_12924903_12925004_12925089_12925175_12928341_12928458_12928534_12928664_12928754_12928848_12930222_12930342_12930428_12930528_12930611_12930750_12933549
transcript_101947.known	chr19	-	1707	13	FSM	ENSG00000179115.11	ENST00000586146.5	1707	13	0	0	0	0	multi-exon	FALSE	canonical	1	29	junction_7	341.442121335699	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAGACCTGTGGGCCACC	-12924165	True	NA	-70	True	NA	NA	NA	12933696	12922529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12922887_12924150_12924266_12924448_12924527_12924638_12924808_12924903_12925004_12925089_12925175_12928341_12928458_12928572_12928664_12928754_12928848_12930222_12930342_12930428_12930528_12930611_12930750_12933549
transcript_10195.known	chr1	+	1299	2	FSM	ENSG00000285407.1	ENST00000646995.1	1299	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTCTCTCTCTTTTTTT	68881502	False	NA	NA	False	NA	NA	NA	68881576	68943452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_68882004_68942580
transcript_101955.known	chr19	-	1831	12	FSM	ENSG00000179115.11	ENST00000588965.5	1831	12	0	0	0	0	multi-exon	FALSE	canonical	3	1060	junction_8	73.1807453337509	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGGCCCTGAGGAGACCT	-12924165	True	NA	-80	True	NA	NA	NA	12933696	12922539	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12922887_12924150_12924266_12924448_12924527_12924638_12925004_12925089_12925175_12928341_12928458_12928534_12928664_12928754_12928848_12930222_12930342_12930428_12930528_12930611_12930750_12933549
transcript_10197.known	chr1	-	2843	15	FSM	ENSG00000066557.6	ENST00000370952.4	2843	15	0	0	0	0	multi-exon	TRUE	canonical	3	290	junction_10	38.9408892700572	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAATGTTTATGTTTTCA	-70199756	True	NA	NA	False	AATAAA	-23	NA	70205579	70144804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_70145906_70148486_70148673_70151127_70151206_70152432_70152544_70155688_70155797_70159329_70159439_70173464_70173511_70173621_70173710_70175809_70175983_70178850_70178994_70181085_70181210_70184784_70184915_70187264_70187339_70189091_70189274_70205389
transcript_101977.known	chr19	+	1901	9	FSM	ENSG00000179218.15	ENST00000316448.10	1901	9	0	0	0	0	multi-exon	FALSE	canonical	3	2768	junction_3	281.249194443291	1125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGTGTCTCCTTCTGG	12734575	True	NA	25	True	ATTAAA	-17	NA	12938608	12944489	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12938771_12939133_12939236_12939427_12939632_12940052_12940148_12940242_12940453_12940540_12940655_12940743_12940888_12943536_12943630_12943712
transcript_101985.known	chr19	+	1772	9	FSM	ENSG00000179262.10	ENST00000586534.6	1772	9	0	0	0	0	multi-exon	FALSE	canonical	3	545	junction_6	295.16510210389	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTATGGTCTGTGCCTGC	12933556	True	NA	14	True	AATAAA	-14	NA	12945861	12953642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12946021_12947847_12948010_12948176_12948359_12948496_12948553_12948685_12948814_12949080_12949160_12949274_12949409_12952688_12952854_12952935
transcript_101990.known	chr19	+	1691	9	FSM	ENSG00000179262.10	ENST00000593114.5	1691	9	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	473.52017842432	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGAAGTGAATAAAGTTT	12945875	True	NA	-15	True	GATAAA	-3	NA	12945893	12953613	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_12946021_12947847_12948010_12948176_12948359_12948513_12948553_12948685_12948814_12949080_12949160_12949277_12949409_12952688_12952854_12952935
transcript_102.nnic	SIRV3	+	1117	8	NNC	SIRV3A	novel	1083	8	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1287.01553199324	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGTTAACGTCTCGTAAG	NA	False	NA	NA	False	NA	NA	NA	1936	8937	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_SIRV3_+_2006_4003_4081_4568_4780_6057_6334_7270_7363_7861_7989_8124_8208_8755
transcript_102014.known	chr19	-	1769	2	FSM	ENSG00000179271.3	ENST00000316939.3	1769	2	0	0	0	0	multi-exon	FALSE	canonical	3	2580	junction_1	0	2999	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTCTTTTATAAAACTT	-12923277	True	NA	NA	False	AATAAA	-17	NA	12957223	12953118	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_12954527_12956862
transcript_102015.known	chr19	-	1481	4	FSM	ENSG00000104903.5	ENST00000264824.5	1481	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	2.49443825784929	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAGTGGTGCCTCATTTT	-13102813	True	NA	-3	True	NA	NA	NA	13102858	13099032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_13099735_13100656_13100749_13100836_13101196_13102530
transcript_102016.known	chr19	-	2579	18	FSM	ENSG00000104907.13	ENST00000592062.5	2579	18	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_17	117.430712840973	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGATTGCCTGTGGTTTG	-13117370	False	NA	-11	True	AATAAA	-20	NA	13117567	13104906	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_13105082_13105266_13105397_13105486_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13109914_13110002_13110157_13110307_13112704_13112818_13112895_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145_13116432_13116652_13117113_13117488
transcript_102017.nic	chr19	-	2046	17	NIC	ENSG00000104907.13	novel	2579	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_16	117.322988343078	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGATTGCCTGTGGTTTG	-13111437	True	NA	-11	True	AATAAA	-20	NA	13116749	13104906	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_13105082_13105266_13105397_13105486_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13109914_13110002_13110157_13110307_13112704_13112818_13112895_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145_13116341_13116652
transcript_102022.known	chr19	-	2127	16	FSM	ENSG00000104907.13	ENST00000593157.5	2127	16	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_15	120.313959659255	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGATTGCCTGTGGTTTG	-13111428	True	NA	-11	True	AATAAA	-20	NA	13116740	13104906	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_13105082_13105266_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13109914_13110002_13110157_13110307_13112704_13112818_13112895_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145_13116341_13116652
transcript_102033.nic	chr19	+	4622	7	NIC	ENSG00000160877.6	novel	717	3	NA	NA	-77	0	intron_retention	FALSE	canonical	3	11	junction_1	57.6351069709735	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCGCATGCTCGTTACT	NA	False	NA	16	True	AATAAA	-21	NA	13116784	13141147	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_13116936_13117993_13118132_13135199_13136154_13136231_13136406_13137270_13137377_13137477_13137576_13138146
transcript_102035.known	chr19	+	4524	6	FSM	ENSG00000160877.6	ENST00000292431.5	4524	6	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_5	10.7962956610126	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCGCATGCTCGTTACT	13108690	True	NA	16	True	AATAAA	-21	NA	13118263	13141147	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_13118455_13135199_13136154_13136231_13136406_13137270_13137377_13137477_13137576_13138146
transcript_102038.known	chr19	-	2263	16	FSM	ENSG00000104907.13	ENST00000437766.5	2263	16	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_9	69.9844427156652	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCCTGTGGTTTGTGTAT	-13111337	True	NA	-6	True	AATAAA	-25	NA	13116649	13104901	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_13105082_13105266_13105397_13105486_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13109914_13110002_13110157_13110307_13112704_13112818_13112895_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145
transcript_102039.known	chr19	-	2179	15	FSM	ENSG00000104907.13	ENST00000221504.12	2179	15	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_8	105.887816068879	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGATTGCCTGTGGTTTG	-13111345	True	NA	-11	True	AATAAA	-20	NA	13116657	13104906	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_13105082_13105266_13105397_13105486_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13110157_13110307_13112704_13112818_13112895_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145
transcript_102040.known	chr19	-	2251	15	FSM	ENSG00000104907.13	ENST00000588511.5	2251	15	0	0	0	0	multi-exon	TRUE	canonical	3	44	junction_10	119.42457700087	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAACCAATAAAGAGATGT	-13111413	True	NA	-43	True	GGGGCT	-21	NA	13116725	13104938	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_13105082_13105266_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13109914_13110002_13110157_13110307_13112704_13112818_13112908_13113012_13115278_13115467_13115625_13115769_13115996_13116432_13116652
transcript_102045.known	chr19	-	1304	8	FSM	ENSG00000104915.15	ENST00000587230.6	1304	8	0	0	0	0	multi-exon	FALSE	canonical	2	253	junction_6	64.5543593115326	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTCGTGTGGTGTGTG	-13144671	True	NA	1	True	AATAAA	-23	NA	13150375	13144057	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_13144487_13144576_13144672_13144763_13144871_13145287_13145396_13149028_13149092_13149498_13149594_13149727_13149898_13150138
transcript_102047.nic	chr19	-	1227	8	NIC	ENSG00000104915.15	novel	1304	8	NA	NA	-5	-3	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	141.811458619952	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACGTATTTGTGTCGTGTG	-13150194	False	NA	-6	True	AATAAA	-16	NA	13150388	13144064	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_13144404_13144576_13144672_13144763_13144871_13145287_13145396_13149028_13149092_13149498_13149594_13149727_13149898_13150138
transcript_102048.known	chr19	-	704	7	FSM	ENSG00000104915.15	ENST00000587318.5	704	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	156.144608901137	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTATTTGTGTCGTGTGGTG	-13149691	False	NA	-3	True	AATAAA	-19	NA	13149885	13144061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_13144140_13144576_13144672_13144763_13144871_13145287_13145396_13149028_13149092_13149498_13149594_13149727
transcript_102049.nic	chr19	-	1681	7	ISM	ENSG00000104915.15	ENST00000587230.6	1304	8	-140	4	-132	0	intron_retention	FALSE	canonical	2	253	junction_6	62.9199226530569	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTATTTGTGTCGTGTGGTG	-13150321	False	NA	-3	True	AATAAA	-19	NA	13150515	13144061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_13144487_13144576_13144672_13144763_13144871_13145287_13145396_13149028_13149092_13149498_13149594_13149727
transcript_102050.known	chr19	-	940	7	FSM	ENSG00000104915.15	ENST00000440593.3	940	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	154.116207958656	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCGCCGACAGTGGTGTG	-13144637	True	NA	NA	False	NA	NA	NA	13150341	13144488	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_13144672_13144763_13144871_13145287_13145396_13149028_13149092_13149498_13149605_13149727_13149898_13150138
transcript_102051.known	chr19	-	713	7	FSM	ENSG00000104915.15	ENST00000593126.5	713	7	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	153.078048357329	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTCCCCTAGAGCCAG	-13149645	False	NA	NA	False	NA	NA	NA	13149839	13144270	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_13144404_13144576_13144672_13144763_13144871_13145287_13145396_13149028_13149092_13149498_13149594_13149727
transcript_102052.known	chr19	-	1073	6	FSM	ENSG00000104915.15	ENST00000591843.1	1073	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	160.726600163134	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTCGTGTGGTGTGTG	-13144583	True	NA	1	True	AATAAA	-23	NA	13150287	13144057	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_13144487_13144576_13144672_13144763_13144871_13145287_13145396_13149712_13149898_13150138
transcript_102054.nic	chr19	-	1628	6	ISM	ENSG00000104915.15	ENST00000589083.5	1241	7	-146	0	3	0	intron_retention	FALSE	canonical	2	253	junction_5	68.6072882425767	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTATTTGTGTCGTGTGGTG	-13144668	True	NA	-3	True	AATAAA	-19	NA	13150372	13144061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_13144672_13144763_13144871_13145287_13145396_13149028_13149092_13149498_13149594_13149727
transcript_102056.known	chr19	+	1291	2	FSM	ENSG00000160888.7	ENST00000587885.1	1291	2	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTACTGTGGGCTGTGCT	13148910	True	NA	NA	False	TTTAAA	-25	NA	13150414	13154249	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_13150553_13153096
transcript_102057.known	chr19	+	2110	2	FSM	ENSG00000160888.7	ENST00000292433.4	2110	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	2413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTGTCTGGTTTTCTGC	13148906	True	NA	26	True	AATAAA	-22	NA	13150410	13154911	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_13150553_13152943
transcript_102058.known	chr19	+	2934	1	FSM	ENSG00000160888.7	ENST00000588173.1	2934	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2447	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGGTGCTGTCTGGTTTTC	13151959	False	NA	23	True	AATAAA	-19	NA	13151974	13154908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_13152000_13154900
transcript_102059.known	chr19	-	1651	8	FSM	ENSG00000141837.22	ENST00000593160.2	1651	8	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	3.8703477668983	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGGTGAAACCCTGTCT	-13505839	False	NA	NA	False	NA	NA	NA	13505939	13333639	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_13334494_13335805_13335910_13359605_13359800_13365316_13365470_13371687_13371780_13452875_13453016_13455106_13455213_13505931
transcript_102064.nic	chr19	+	2061	11	NIC	ENSG00000104957.14	novel	1922	11	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	41.3237220008072	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGTCTTGGGTTGTTA	13731285	True	NA	8	True	ATTAAA	-14	NA	13731731	13763289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_13732069_13732174_13732286_13751607_13751812_13754288_13754343_13756196_13756280_13757417_13757474_13757785_13757847_13758867_13759011_13759099_13759273_13762298_13762438_13762589
transcript_102069.known	chr19	+	1922	11	FSM	ENSG00000104957.14	ENST00000586600.5	1922	11	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	40.3286498658212	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGTTGTTAGATGGAC	13731313	True	NA	15	True	ATTAAA	-21	NA	13731759	13763296	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_13731951_13732174_13732286_13751607_13751812_13754288_13754343_13756196_13756280_13757417_13757474_13757785_13757847_13758867_13759011_13759099_13759273_13762298_13762438_13762589
transcript_102070.nic	chr19	+	2091	11	NIC	ENSG00000104957.14	novel	1922	11	NA	NA	-9	0	intron_retention	FALSE	canonical	3	8	junction_1	48.2937884204584	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGTCTTGGGTTGTTA	13731304	True	NA	8	True	ATTAAA	-14	NA	13731750	13763289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_13731951_13732174_13732286_13751607_13751812_13754288_13754343_13756196_13756280_13757417_13757474_13757785_13757847_13758867_13759273_13761490_13761569_13762298_13762438_13762589
transcript_102072.nic	chr19	+	2150	10	NIC	ENSG00000104957.14	novel	1922	11	NA	NA	-28	0	intron_retention	FALSE	canonical	1	3	junction_1	42.5522191903629	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGTCTTGGGTTGTTA	13731285	True	NA	8	True	ATTAAA	-14	NA	13731731	13763289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_13732069_13732174_13732286_13751607_13751812_13754288_13754343_13756196_13756280_13757417_13757474_13757785_13757847_13758867_13759273_13762298_13762438_13762589
transcript_102073.nnic	chr19	+	2144	10	NNC	ENSG00000104957.14	novel	1922	11	NA	NA	-10	0	intron_retention	FALSE	canonical	2	3	junction_1	42.5522191903629	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGTCTTGGGTTGTTA	13731303	True	NA	8	True	ATTAAA	-14	NA	13731749	13763289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_13732081_13732174_13732286_13751607_13751812_13754288_13754343_13756196_13756280_13757417_13757474_13757785_13757847_13758867_13759273_13762298_13762438_13762589
transcript_102075.nic	chr19	+	2013	10	NIC	ENSG00000104957.14	novel	1922	11	NA	NA	-9	0	intron_retention	FALSE	canonical	3	8	junction_1	41.4380394216608	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGTCTTGGGTTGTTA	13731304	True	NA	8	True	ATTAAA	-14	NA	13731750	13763289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_13731951_13732174_13732286_13751607_13751812_13754288_13754343_13756196_13756280_13757417_13757474_13757785_13757847_13758867_13759273_13762298_13762438_13762589
transcript_102076.known	chr19	+	1673	10	FSM	ENSG00000104957.14	ENST00000221554.13	1673	10	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_7	21.8428732338745	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGTCTTGGGTTGTTA	13746143	True	NA	8	True	ATTAAA	-14	NA	13747894	13763289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_13747955_13751607_13751812_13754288_13754343_13756196_13756280_13757417_13757474_13757785_13757847_13758867_13759011_13759099_13759273_13762298_13762438_13762589
transcript_102078.nic	chr19	+	1887	10	NIC	ENSG00000104957.14	novel	1673	10	NA	NA	-16	0	intron_retention	FALSE	canonical	3	12	junction_7	40.739764298063	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGTCTTGGGTTGTTA	13746096	True	NA	8	True	ATTAAA	-14	NA	13747847	13763289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_13747955_13751607_13751812_13754288_13754343_13756196_13756280_13757417_13757474_13757785_13757847_13758867_13759273_13761490_13761569_13762298_13762438_13762589
transcript_102087.known	chr19	+	1783	9	FSM	ENSG00000104957.14	ENST00000593174.5	1783	9	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	17.4409718765899	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTCTTCTTCCCTGTCT	13746112	True	NA	-2	True	ATTAAA	-4	NA	13747863	13763279	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_13747955_13751607_13751812_13754288_13754343_13756196_13756280_13757417_13757474_13757785_13757847_13758867_13759273_13762298_13762438_13762589
transcript_1021.known	chr1	+	2612	16	FSM	ENSG00000197785.14	ENST00000378755.9	2612	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	138.074311714944	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCCTGTCTGTCTCTTGG	1499145	True	NA	28	True	AATAAA	-18	NA	1512174	1534685	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1512474_1516011_1516089_1517166_1517413_1517715_1517776_1518920_1518991_1520140_1520307_1520547_1520618_1522743_1522900_1523510_1523568_1523838_1523965_1524272_1524398_1525239_1525292_1526460_1526532_1527694_1527863_1529222_1529332_1533925
transcript_102106.nnic	chr19	+	2496	7	NNC	ENSG00000037757.14	novel	3178	6	NA	NA	-12	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	20.4239782826189	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCGTTTTGTTCGTAATG	13761600	True	NA	22	True	AATAAA	-17	NA	13764509	13774279	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_13764721_13764870_13765110_13765953_13766130_13768560_13768738_13768823_13769049_13772120_13772571_13773261
transcript_102107.nnic	chr19	+	2011	7	NNC	ENSG00000037757.14	novel	3178	6	NA	NA	-12	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	20.4239782826189	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTTTGTTCGTAATGTTT	13761600	True	NA	25	True	AATAAA	-20	NA	13764509	13774282	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_13764721_13764870_13765110_13765953_13766130_13768560_13768738_13768823_13769049_13772120_13772646_13773824
transcript_10211.known	chr1	+	3784	13	FSM	ENSG00000116754.14	ENST00000370950.7	3784	13	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	286.250570111029	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTCCTTATTTATTT	70199760	True	NA	20	True	AATAAA	-21	NA	70205723	70253052	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_70205781_70221611_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364_70250504_70250607
transcript_102110.known	chr19	+	3178	6	FSM	ENSG00000037757.14	ENST00000040663.8	3178	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	5.69209978830308	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTTTGTTCGTAATGTTT	13761612	True	NA	25	True	AATAAA	-20	NA	13764521	13774282	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_13764721_13764870_13765110_13765953_13766130_13768560_13768738_13768823_13769049_13772120
transcript_102113.known	chr19	+	666	4	FSM	ENSG00000104979.9	ENST00000588858.5	666	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1294.5476258352	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTGCAGTCCTGTGTTC	13757683	True	NA	16	True	AATAAA	-16	NA	13774517	13778461	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_13774575_13774651_13774708_13775470_13775614_13778051
transcript_102114.known	chr19	+	897	3	FSM	ENSG00000104979.9	ENST00000588234.6	897	3	0	0	0	0	multi-exon	FALSE	canonical	3	2783	junction_1	52.5	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACGTGGTACTACCTGGTT	13757621	True	NA	NA	False	ATTAAA	-19	NA	13774455	13778773	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_13774575_13774651_13774708_13778051
transcript_102116.known	chr19	+	504	2	FSM	ENSG00000104979.9	ENST00000221576.4	504	2	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCTTGCAGTCCTGTGT	13757644	True	NA	14	True	AATAAA	-14	NA	13774478	13778459	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_13774575_13778051
transcript_102117.known	chr19	+	491	2	FSM	ENSG00000104979.9	ENST00000593274.1	491	2	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGCAGTCCTGTGTTCG	13774567	True	NA	17	True	AATAAA	-17	NA	13774823	13778462	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_13774904_13778051
transcript_102121.nic	chr19	+	4756	14	FSM	ENSG00000132003.10	ENST00000590508.6	4731	14	-49	24	-49	0	multi-exon	FALSE	canonical	3	62	junction_5	10.7069628398738	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	13793561	True	NA	117	True	NA	NA	NA	13795393	13832230	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_13795802_13799719_13799922_13804791_13805149_13808835_13808985_13809069_13809221_13812996_13813165_13814514_13814866_13817215_13817354_13817721_13817977_13819356_13819493_13823345_13823501_13825549_13825714_13828644_13828727_13830190
transcript_102124.known	chr19	+	4339	13	FSM	ENSG00000132003.10	ENST00000254323.6	4339	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	22.7998538007009	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	13793627	True	NA	117	True	NA	NA	NA	13795459	13832230	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_13795802_13799719_13799922_13804791_13805149_13808835_13808985_13809069_13809221_13812996_13813165_13817215_13817354_13817721_13817977_13819356_13819493_13823345_13823501_13825549_13825714_13828644_13828727_13830190
transcript_102130.nic	chr19	+	3045	6	ISM	ENSG00000132003.10	ENST00000254323.6	4339	13	22049	0	-190	0	3prime_fragment	FALSE	canonical	3	85	junction_2	4.99599839871872	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	117	True	NA	NA	NA	13817508	13832230	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_13817977_13819356_13819493_13823345_13823501_13825549_13825714_13828644_13828727_13830190
transcript_102132.nnic	chr19	+	2960	5	NIC	ENSG00000132003.10	novel	4339	13	NA	NA	-241	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	40.3763544664448	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	117	True	NA	NA	NA	13817457	13832230	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_13817977_13823345_13823501_13825549_13825714_13828644_13828727_13830190
transcript_102134.known	chr19	+	719	5	FSM	ENSG00000132003.10	ENST00000592227.1	719	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	40.3763544664448	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGAACCACTCGGCCTTC	13817588	False	NA	NA	False	NA	NA	NA	13817698	13830415	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_13817901_13823454_13823501_13825549_13825714_13828644_13828727_13830190
transcript_102136.known	chr19	+	3117	29	FSM	ENSG00000132024.18	ENST00000589606.5	3117	29	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_23	44.4680577860705	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCGCCCCGGAGCAGGGA	13903131	False	NA	NA	False	NA	NA	NA	13906441	13930659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_13906502_13909822_13909959_13912322_13912439_13912527_13912594_13913167_13913303_13913403_13913639_13918069_13918195_13918503_13918577_13918745_13918818_13918911_13919043_13919129_13919203_13919817_13919952_13920556_13920669_13920749_13920923_13923332_13923456_13923547_13923607_13923694_13923812_13926516_13926591_13926666_13926726_13926820_13926873_13926977_13927078_13927174_13927266_13927892_13928031_13928126_13928189_13929378_13929443_13929533_13929661_13930077_13930155_13930241_13930290_13930374
transcript_102146.known	chr19	-	2489	8	FSM	ENSG00000132016.12	ENST00000346736.6	2489	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	7.87141560797481	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGACCTGCTGTTTGGG	-13905720	True	NA	-12	True	AATAAA	-16	NA	13906165	13882354	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_13882953_13885960_13886056_13889187_13890463_13892785_13892891_13893141_13893224_13895371_13895547_13904861_13904914_13906058
transcript_102148.known	chr19	+	1972	17	FSM	ENSG00000132024.18	ENST00000679937.1	1972	17	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_14	52.1155192217251	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTCCCCAGGGCCAGCAC	13920487	False	NA	-30	True	NA	NA	NA	13920501	13930830	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_13920669_13920749_13920923_13923332_13923456_13923547_13923607_13923694_13923812_13926516_13926591_13926666_13926726_13926820_13926873_13926977_13927078_13927174_13927266_13927892_13928031_13928123_13928189_13929378_13929443_13929533_13929643_13930077_13930155_13930241_13930290_13930374
transcript_102149.known	chr19	-	2454	8	ISM	ENSG00000132016.12	ENST00000586783.6	2885	9	1225	7	1215	0	3prime_fragment	FALSE	canonical	3	12	junction_2	5.14682386704338	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGACCTGCTGTTTGGG	-13904868	False	NA	-12	True	AATAAA	-16	NA	13904892	13882354	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_13882953_13883307_13883401_13885960_13886056_13889187_13890463_13892785_13892891_13893141_13893224_13895371_13895547_13904861
transcript_102152.known	chr19	+	2278	13	FSM	ENSG00000132017.11	ENST00000254337.11	2261	13	-17	0	-17	0	multi-exon	FALSE	canonical	3	327	junction_7	37.0100399291267	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGGTCCTGTCACTGCAG	13944870	True	NA	22	True	AATAAA	-22	NA	13952491	13961449	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_13952645_13954339_13954438_13954525_13954662_13955911_13956019_13956122_13956263_13956351_13956523_13959044_13959480_13959581_13959674_13959766_13959896_13959983_13960070_13960286_13960392_13960464_13960581_13960939
transcript_10216.known	chr1	+	2385	13	FSM	ENSG00000116754.14	ENST00000370951.5	2385	13	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_1	271.299598639995	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAACCTTATCTCTTG	70199718	True	NA	NA	False	NA	NA	NA	70205681	70251617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_70205781_70221614_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364_70250504_70250610
transcript_102167.nic	chr19	+	2401	12	NIC	ENSG00000132017.11	novel	2261	13	NA	NA	-67	0	intron_retention	FALSE	canonical	3	327	junction_7	37.6427311258305	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGGTCCTGTCACTGCAG	NA	False	NA	22	True	AATAAA	-22	NA	13952441	13961449	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_13952645_13954339_13954438_13954525_13954662_13955911_13956019_13956122_13956263_13956351_13956523_13959044_13959480_13959581_13959674_13959766_13959896_13959983_13960070_13960286_13960581_13960939
transcript_102222.known	chr19	-	4375	21	FSM	ENSG00000132005.9	ENST00000254325.9	4375	21	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_4	4.53982378512647	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGACTCGCCGGGCCTT	-14004318	True	NA	-4	True	AATAAA	-22	NA	14006320	13961529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_13962865_13962993_13963040_13963121_13963276_13963537_13963747_13963857_13964008_13965448_13965547_13965625_13965778_13966420_13966531_13966632_13966752_13968564_13968681_13968774_13968895_13969993_13970176_13972742_13973128_13977991_13978087_13979446_13979543_13980572_13980690_13982120_13982229_13983186_13983271_13983485_13983596_13993524_13993896_14006102
transcript_102223.nnic	chr19	-	4081	21	NNC	ENSG00000132005.9	novel	4375	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	4.6933463541486	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGACTCGCCGGGCCTT	-14004318	True	NA	-4	True	AATAAA	-22	NA	14006320	13961529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_13962865_13962993_13963040_13963121_13963276_13963537_13963747_13963857_13964008_13965448_13965547_13965625_13965778_13966420_13966531_13966632_13966752_13968564_13968681_13968774_13968895_13969993_13970176_13973036_13973128_13977991_13978087_13979446_13979543_13980572_13980690_13982120_13982229_13983186_13983271_13983485_13983596_13993524_13993896_14006102
transcript_102231.nic	chr19	-	1822	4	ISM	ENSG00000132005.9	ENST00000254325.9	4375	21	42496	0	231	0	3prime_fragment	FALSE	canonical	1	3	junction_1	4.24264068711928	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGACTCGCCGGGCCTT	-13963806	False	NA	-4	True	AATAAA	-22	NA	13963824	13961529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_13962865_13962993_13963040_13963121_13963276_13963537
transcript_102232.nic	chr19	-	657	2	ISM	ENSG00000132005.9	ENST00000588885.1	886	5	-301	14809	-241	46	5prime_fragment	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGTTGGTAATATGTTAA	-14006550	True	NA	-5	True	NA	NA	NA	14006563	13998121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_13998318_14006102
transcript_102238.known	chr19	+	2950	14	FSM	ENSG00000104998.4	ENST00000263379.4	2950	14	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	12.4396769302976	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTAGCTTTGAGGTCTTTT	14029932	True	NA	10	True	AATAAA	-21	NA	14031761	14053218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_14031973_14032385_14032504_14039507_14039666_14039752_14039911_14042452_14042613_14042715_14042790_14046153_14046338_14046429_14046619_14048980_14049083_14049155_14049315_14050757_14050884_14051606_14051701_14051879_14051974_14052095
transcript_102259.nnic	chr19	+	2577	13	NIC	ENSG00000104998.4	novel	2950	14	NA	NA	-72	-287	combination_of_known_splicesites	TRUE	canonical	2	2	junction_2	31.6389132767441	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGCATTTGGGCACCATC	14029860	True	NA	NA	False	AATAAA	-45	NA	14031689	14052931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_14031973_14032385_14032504_14039752_14039911_14042452_14042613_14042715_14042790_14046153_14046338_14046429_14046619_14048980_14049083_14049155_14049315_14050757_14050884_14051606_14051701_14051879_14051974_14052095
transcript_102269.known	chr19	-	2383	5	FSM	ENSG00000187867.10	ENST00000589048.2	2383	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	6.57171971404746	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGCTTGAATGTGTGTGT	-14055800	True	NA	-9	True	AATAAA	-17	NA	14057599	14053366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_14055227_14055379_14055426_14056428_14056514_14056661_14056805_14057350
transcript_102275.known	chr19	-	1443	6	FSM	ENSG00000188032.10	ENST00000548523.6	1443	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.489897948556636	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGCTCAGCGTCCGCTG	-14085773	False	NA	NA	False	AATAAA	-15	NA	14085783	14081623	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_14082009_14082468_14082604_14083236_14083423_14083504_14083606_14083732_14083878_14085292
transcript_102278.known	chr19	-	746	4	FSM	ENSG00000105011.9	ENST00000590835.5	746	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	114.700576381386	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTGTCCCAGCACGCCG	-14132877	True	NA	NA	False	NA	NA	NA	14136613	14120447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_14120666_14121531_14121678_14126121_14126238_14136347
transcript_102279.known	chr19	-	1689	4	FSM	ENSG00000105011.9	ENST00000263382.8	1689	4	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_2	14.522013940528	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTTTGTGCTTTTGTC	-14132853	True	NA	-4	True	ATTAAA	-39	NA	14136589	14119511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_14120666_14121531_14121709_14126121_14126238_14136347
transcript_102280.known	chr19	-	587	3	FSM	ENSG00000105011.9	ENST00000589468.1	587	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	114.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCCTCCTCCCTGAGAA	-14132853	True	NA	NA	False	GGGGCT	-14	NA	14136589	14120497	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_14120666_14121531_14121709_14136347
transcript_102281.known	chr19	-	769	3	FSM	ENSG00000105011.9	ENST00000592798.5	769	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	126.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCGTCTTCATAAATTC	-14132817	True	NA	NA	False	NA	NA	NA	14136553	14120218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_14120666_14126121_14126238_14136347
transcript_102282.known	chr19	-	765	3	FSM	ENSG00000105011.9	ENST00000474890.1	765	3	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	17.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATGAGCCAGA	-14132838	True	NA	NA	False	NA	NA	NA	14136574	14121286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_14121709_14126121_14126238_14136347
transcript_102288.known	chr19	+	686	2	FSM	ENSG00000267169.2	ENST00000588658.1	686	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTAGGCTATATTTGCTG	14136942	True	NA	NA	False	NA	NA	NA	14137187	14155801	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_14137224_14155151
transcript_102291.known	chr19	+	3054	19	FSM	ENSG00000123146.20	ENST00000357355.7	3054	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	4.13655788199695	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTTGCCTGCTGGTGGT	14381416	False	NA	11	True	ATTAAA	-18	NA	14381434	14408725	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_14381546_14388449_14388501_14388701_14388819_14390923_14391080_14396341_14396474_14397657_14397805_14397888_14397936_14398061_14398140_14401385_14401564_14401652_14401761_14402596_14402863_14404382_14404563_14405747_14405940_14406330_14406558_14406699_14406767_14406868_14406961_14407060_14407230_14407907_14408010_14408091
transcript_102294.nnic	chr19	+	3145	18	NNC	ENSG00000123146.20	novel	3190	20	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	4.18764040719004	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGCCTTGCCTGCTGGTG	NA	False	NA	9	True	ATTAAA	-16	NA	14381131	14408723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_14381546_14388449_14388501_14388701_14388819_14390923_14391080_14397657_14397805_14397888_14397936_14398061_14398140_14401385_14401564_14401652_14401761_14402596_14402863_14404382_14404563_14405747_14405907_14406375_14406558_14406699_14406767_14406868_14406961_14407060_14407230_14407907_14408010_14408091
transcript_102295.known	chr19	+	2751	18	FSM	ENSG00000123146.20	ENST00000358600.7	2751	18	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	3.47208342667617	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAAAGTCCAGGACACCC	NA	False	NA	NA	False	NA	NA	NA	14381155	14408275	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_14381546_14388449_14388501_14388701_14388819_14390923_14391080_14397657_14397805_14397888_14397936_14398061_14398140_14401385_14401564_14401652_14401761_14402596_14402863_14404382_14404563_14405747_14405940_14406330_14406558_14406699_14406767_14406868_14406961_14407060_14407230_14407907_14408010_14408091
transcript_102307.known	chr19	-	1498	11	FSM	ENSG00000123136.15	ENST00000242776.9	1498	11	0	0	0	0	multi-exon	FALSE	canonical	3	948	junction_6	53.5148577499744	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGGTCATCTTGGCCT	-14405963	True	NA	0	True	AATAAA	-37	NA	14419341	14408797	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_14408953_14409036_14409185_14409302_14409448_14409535_14409646_14409741_14409874_14410215_14410335_14410988_14411173_14411505_14411599_14412550_14412679_14413012_14413225_14419269
transcript_102317.nic	chr19	-	1890	10	NIC	ENSG00000123136.15	novel	1498	11	NA	NA	-29	0	intron_retention	FALSE	canonical	3	948	junction_5	55.2489316136018	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCTCCCACCCCATCT	-14419401	False	NA	-21	True	AATAAA	-16	NA	14419412	14408818	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_14408953_14409036_14409185_14409302_14409448_14409535_14409646_14409741_14410335_14410988_14411173_14411505_14411599_14412550_14412679_14413012_14413225_14419269
transcript_10233.nic	chr1	+	1279	12	ISM	ENSG00000116754.14	ENST00000370951.5	2385	13	-12	1225	-12	-333	5prime_fragment	FALSE	canonical	3	220	junction_1	245.7139706486	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAAAGAAAGAAGTAGGGA	70199706	True	NA	-6	True	CATAAA	-22	NA	70205669	70250392	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_70205781_70221614_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364
transcript_102336.known	chr19	-	1903	9	FSM	ENSG00000123136.15	ENST00000589318.5	1903	9	0	0	0	0	multi-exon	FALSE	canonical	3	948	junction_4	58.5030715005631	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCTCCCACCCCATCT	-14405959	True	NA	-21	True	AATAAA	-16	NA	14419337	14408818	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_14408953_14409036_14409185_14409302_14409646_14409741_14410335_14410988_14411173_14411505_14411599_14412550_14412679_14413012_14413225_14419269
transcript_102358.known	chr19	+	3120	22	FSM	ENSG00000123143.13	ENST00000242783.11	3120	22	0	0	0	0	multi-exon	FALSE	canonical	3	733	junction_5	74.2915138151277	636	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGCATCCTCCGTGTCT	14427625	True	NA	17	True	AAAAAG	-20	NA	14433305	14471859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_14433543_14441142_14441444_14443469_14443622_14446425_14446562_14450317_14450464_14450895_14451110_14451828_14452024_14458030_14458141_14458231_14458376_14463666_14463743_14463827_14463970_14464059_14464154_14467564_14467642_14467717_14467794_14467875_14467968_14469340_14469518_14469751_14469815_14469911_14469989_14470162_14470306_14470574_14470683_14470770_14470852_14471580
transcript_102384.known	chr19	-	1413	3	FSM	ENSG00000160951.4	ENST00000292513.4	1413	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGCAGGACCGTGTGT	-14475342	False	18	-4	True	AATAAA	-15	NA	14475354	14472465	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_14472827_14473378_14474338_14475261
transcript_102389.known	chr19	-	1921	9	FSM	ENSG00000123159.16	ENST00000393033.9	1921	9	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_8	170.087293764114	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACCTGTGTGGCTTCGGGG	-14491755	True	NA	-2	True	CATAAA	-17	NA	14496127	14477761	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_14478568_14478683_14478766_14479411_14479525_14480304_14480486_14480592_14480779_14482688_14483007_14491655_14491744_14492856_14492913_14496036
transcript_102394.known	chr19	-	1386	8	FSM	ENSG00000123159.16	ENST00000586027.5	1386	8	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_7	152.550694150221	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTCCCTGGTTCCCAGTC	-14491760	True	NA	NA	False	NA	NA	NA	14496132	14478245	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_14478568_14478683_14478766_14479411_14479525_14480304_14480486_14480592_14480779_14482688_14483007_14491655_14491744_14496036
transcript_102397.known	chr19	-	1782	7	FSM	ENSG00000123159.16	ENST00000345425.6	1782	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_6	280.562777684821	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACCTGTGTGGCTTCGGGG	-14491760	True	NA	-2	True	CATAAA	-17	NA	14496132	14477761	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_14478568_14478683_14478766_14479411_14479525_14480304_14480486_14480592_14480779_14482688_14483007_14496036
transcript_102399.known	chr19	-	1068	7	FSM	ENSG00000123159.16	ENST00000591349.5	1068	7	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_5	279.895466598197	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTCCCTGGTTCCCAGTC	-14491760	True	NA	NA	False	NA	NA	NA	14496132	14478245	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_14478568_14478683_14478766_14479411_14479525_14480304_14480486_14480592_14480779_14491655_14491744_14496036
transcript_102400.known	chr19	-	1483	6	FSM	ENSG00000123159.16	ENST00000393028.5	1483	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	302.425792550834	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTGGCTTCGGGGTG	-14491777	True	NA	0	True	CATAAA	-19	NA	14496149	14477759	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_14478568_14478683_14478766_14479411_14479525_14480304_14480486_14480592_14480779_14496036
transcript_102403.known	chr19	+	1204	13	FSM	ENSG00000099797.15	ENST00000600083.5	1204	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	435.96549143507	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGGCTCTGTGTGTTTCT	14501125	True	NA	8	True	AATAAA	-21	NA	14529593	14565980	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_14529712_14562524_14562576_14563140_14563258_14563657_14563703_14563799_14563904_14563981_14564098_14564181_14564288_14564785_14564859_14564948_14564993_14565065_14565124_14565201_14565291_14565617_14565664_14565743
transcript_102406.known	chr19	+	1170	13	FSM	ENSG00000099797.15	ENST00000642961.1	1170	13	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	407.909329181539	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTCGGGCTCTGTGTGTT	14501123	True	NA	5	True	AATAAA	-18	NA	14529591	14565977	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_14529712_14562524_14562576_14563173_14563258_14563657_14563703_14563799_14563904_14563981_14564098_14564181_14564288_14564785_14564859_14564948_14564993_14565065_14565124_14565201_14565291_14565617_14565664_14565743
transcript_102410.known	chr19	+	1139	13	FSM	ENSG00000099797.15	ENST00000215567.10	1139	13	0	0	0	0	multi-exon	FALSE	canonical	3	1352	junction_5	91.7154415691394	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGGCTCTGTGTGTTTCT	14501125	True	NA	8	True	AATAAA	-21	NA	14529593	14565980	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_14529712_14562524_14562576_14563205_14563258_14563657_14563703_14563799_14563904_14563981_14564098_14564181_14564288_14564785_14564859_14564948_14564993_14565065_14565124_14565201_14565291_14565617_14565664_14565743
transcript_102420.known	chr19	+	1164	12	FSM	ENSG00000099797.15	ENST00000597607.5	1164	12	0	0	0	0	multi-exon	FALSE	canonical	3	1352	junction_5	94.8614474635298	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCGGGCTCTGTGTGTTT	14501188	True	NA	6	True	AATAAA	-19	NA	14529656	14565978	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_14529712_14562524_14562576_14563205_14563258_14563657_14563703_14563799_14563904_14563981_14564098_14564181_14564288_14564785_14564993_14565065_14565124_14565201_14565291_14565617_14565664_14565743
transcript_102435.known	chr19	-	2208	4	FSM	ENSG00000132002.9	ENST00000598692.2	2208	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	412.478955692153	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTAAACCTCAGGGGAGCG	-14529304	False	NA	-16	True	ATTAAA	-7	NA	14529322	14514780	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_14516171_14516465_14517047_14527686_14527811_14529209
transcript_102436.known	chr19	-	2215	3	FSM	ENSG00000132002.9	ENST00000598235.2	2215	3	0	0	0	0	multi-exon	FALSE	canonical	2	28	junction_2	423.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTAAACCTCAGGGGAGC	-14513735	False	NA	-17	True	ATTAAA	-6	NA	14517835	14514781	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_14516171_14516465_14517047_14517590
transcript_102437.known	chr19	-	2242	3	FSM	ENSG00000132002.9	ENST00000254322.3	2242	3	0	0	0	0	multi-exon	FALSE	canonical	3	875	junction_1	47	866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGAGCGGTCCTGTGACTC	-14514297	True	NA	-4	True	ATTAAA	-19	NA	14518397	14514768	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_14516171_14516465_14517047_14518138
transcript_102440.known	chr19	-	263	2	FSM	ENSG00000132002.9	ENST00000601087.2	263	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTCTTCTGGAAACTCA	-14529328	False	NA	NA	False	NA	NA	NA	14529346	14527583	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_14527811_14529310
transcript_102441.known	chr19	+	2899	1	FSM	ENSG00000099797.15	ENST00000599646.1	2899	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGGGAAGCTTCAAA	14501161	True	NA	NA	False	NA	NA	NA	14529629	14532528	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_14529600_14532500
transcript_102442.known	chr19	-	2534	2	FSM	ENSG00000132002.9	ENST00000595139.2	2534	2	0	0	0	0	multi-exon	FALSE	canonical	3	969	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTAAACCTCAGGGGAGC	-14514307	True	NA	-17	True	ATTAAA	-6	NA	14518407	14514781	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_14517047_14518138
transcript_102445.known	chr19	-	535	3	FSM	ENSG00000099795.7	ENST00000215565.3	535	3	0	0	0	0	multi-exon	FALSE	canonical	3	2899	junction_2	78	1247	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGAGTCCCCTCTTACTGC	-14538187	True	NA	-4	True	AATAAA	-19	NA	14572066	14566077	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_14566266_14566764_14566934_14571888
transcript_102451.known	chr19	+	4716	12	FSM	ENSG00000160961.12	ENST00000292530.11	4716	12	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_10	13.1915324707033	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTGGACATAGGTATTC	14688697	True	NA	NA	False	AATAAA	-28	NA	14690047	14721899	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_14690151_14693450_14693495_14695009_14695134_14695565_14695662_14699198_14699282_14705053_14705171_14706685_14706774_14715381_14715471_14716111_14716239_14716993_14717090_14717656_14717734_14718227
transcript_102455.known	chr19	+	3595	12	FSM	ENSG00000160961.12	ENST00000540689.6	3595	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_11	17.8853095450054	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTGTGTTTCTTTCCTC	14688718	True	NA	NA	False	AATAAA	-22	NA	14690068	14733746	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_14690151_14693450_14693495_14695009_14695134_14695565_14695662_14699198_14699282_14705053_14705171_14706685_14706774_14715381_14715471_14716111_14716239_14716993_14717090_14717656_14717734_14731174
transcript_102463.nic	chr19	+	1143	7	ISM	ENSG00000160961.12	ENST00000597301.5	1569	11	-57	10981	0	0	5prime_fragment	FALSE	canonical	3	48	junction_5	9.24962461700774	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGTGCATGGTGCCTC	14688698	True	NA	NA	False	NA	NA	NA	14690048	14707262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_14690151_14693450_14693495_14695009_14695134_14695565_14695662_14699198_14699282_14705053_14705171_14706685
transcript_102467.known	chr19	-	2420	10	FSM	ENSG00000105143.13	ENST00000594383.2	2420	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	17.3205080756888	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAAGGTCTCTGTTTCTCT	-14979345	True	NA	NA	False	AATAAA	-20	NA	14979864	14950032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_14950391_14952927_14953063_14954134_14954330_14956475_14956710_14962001_14962346_14964318_14964362_14968302_14968508_14971736_14971875_14972705_14972918_14979308
transcript_102468.nic	chr19	-	2269	10	NIC	ENSG00000105143.13	novel	2420	10	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_9	18.4738721067697	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAAGGTCTCTGTTTCTC	NA	False	NA	NA	False	AATAAA	-19	NA	14979918	14950033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_14950391_14952927_14953063_14954134_14954330_14956475_14956710_14962001_14962346_14964318_14964362_14968302_14968508_14971736_14971875_14972705_14972918_14979512
transcript_102473.nnic	chr19	-	2453	7	NIC	ENSG00000105143.13	novel	2987	8	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	24.0739601136904	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTGAAATATCTCTACA	-14979336	True	NA	2	True	AATAAA	-30	NA	14979855	14961309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_14962346_14964318_14964362_14968302_14968508_14971736_14971875_14972705_14972918_14976760_14977033_14979308
transcript_102475.nic	chr19	-	2219	6	ISM	ENSG00000105143.13	ENST00000594383.2	2420	10	-29	11277	-29	0	5prime_fragment	FALSE	canonical	3	24	junction_5	12.5219806739988	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTGAAATATCTCTACA	NA	False	NA	2	True	AATAAA	-30	NA	14979893	14961309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_14962346_14964318_14964362_14968302_14968508_14971736_14971875_14972705_14972918_14979308
transcript_102476.known	chr19	-	2420	6	FSM	ENSG00000105143.13	ENST00000544886.6	2420	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	16.9162643630324	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTGAAATATCTCTACA	NA	False	NA	2	True	AATAAA	-30	NA	14980298	14961309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_14962346_14964318_14964362_14968302_14968508_14971736_14971875_14972705_14972918_14979512
transcript_102486.nic	chr19	-	2482	16	NIC	ENSG00000105135.16	novel	2305	16	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_15	108.997736979566	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTCTCAGAACCTGTGC	-15123371	True	NA	-13	True	AATAAA	-29	NA	15125687	15114986	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_15115431_15115565_15115672_15115849_15115922_15116000_15116072_15116151_15116322_15116407_15116523_15117880_15118016_15119165_15119303_15119417_15119516_15119981_15120082_15122692_15122805_15122891_15123031_15123115_15123244_15123374_15123577_15124924_15125070_15125379
transcript_102487.known	chr19	-	2305	16	FSM	ENSG00000105135.16	ENST00000263383.8	2305	16	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_15	53.8274609800198	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTCTCAGAACCTGTGC	-15123470	True	NA	-13	True	AATAAA	-29	NA	15125786	15114986	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15115431_15115565_15115672_15115849_15115922_15116000_15116072_15116151_15116322_15116407_15116523_15117880_15118016_15119165_15119303_15119417_15119516_15119981_15120082_15122692_15122805_15122891_15123031_15123115_15123244_15123374_15123577_15124924_15125070_15125655
transcript_10252.nic	chr1	+	1251	11	ISM	ENSG00000116754.14	ENST00000370951.5	2385	13	-12	1570	-12	-678	5prime_fragment	FALSE	canonical	3	220	junction_1	257.310396214378	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAATGTTAATCATTTA	70199706	True	NA	7	True	AAGAAA	-28	NA	70205669	70250047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_70205781_70221614_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951
transcript_102532.known	chr19	+	3252	8	FSM	ENSG00000105137.13	ENST00000342784.7	3252	8	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_7	8.66849797501604	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGACTGAGTACTTGGG	15106184	True	NA	18	True	AATAAA	-16	NA	15107400	15114974	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_15107522_15109055_15109398_15109703_15110349_15110520_15110736_15111312_15111440_15111631_15111793_15112345_15112572_15113559
transcript_102535.known	chr19	+	3058	8	FSM	ENSG00000105137.13	ENST00000600440.5	3058	8	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	30.2459307433349	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTGGGCCTACATGGGC	15106188	True	NA	29	True	AATAAA	-27	NA	15107404	15114985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_15107522_15109256_15109398_15109703_15110349_15110520_15110736_15111312_15111440_15111631_15111793_15112345_15112572_15113559
transcript_102539.nic	chr19	+	2047	7	ISM	ENSG00000105137.13	ENST00000342784.7	3252	8	-60	2253	-60	-901	5prime_fragment	FALSE	canonical	3	87	junction_1	7.40307743817094	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCAATCTGTCTGTTTTG	15106124	True	NA	4	True	AGTAAA	-36	NA	15107340	15112721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_15107522_15109055_15109398_15109703_15110349_15110520_15110736_15111312_15111440_15111631_15111793_15112345
transcript_102548.known	chr19	-	2067	15	FSM	ENSG00000105135.16	ENST00000534378.5	2067	15	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_14	125.073957712864	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCTCTGGCCCATGTAG	-15123406	True	NA	-42	True	NA	NA	NA	15125722	15115015	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15115431_15115565_15115672_15115849_15115922_15116000_15116072_15116151_15116322_15116407_15116523_15117880_15118016_15119165_15119303_15119417_15119516_15119981_15120082_15122692_15122805_15122891_15123031_15123115_15123244_15123374_15123577_15125655
transcript_102558.nic	chr19	-	1525	6	ISM	ENSG00000074181.9	ENST00000601011.1	3858	23	-99	13120	-6	-12093	5prime_fragment	FALSE	canonical	3	219	junction_2	19.5857090757521	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATGCTAGGCCGGGCAC	-15196578	True	NA	NA	False	AATAAA	-6	NA	15201001	15191030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_15191658_15191744_15191868_15191959_15192299_15192376_15192520_15197499_15197579_15200787
transcript_10256.known	chr1	+	1408	11	ISM	ENSG00000116754.14	ENST00000395136.7	1717	12	0	413	0	-333	5prime_fragment	FALSE	canonical	3	45	junction_9	307.845561930004	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAAAGAAAGAAGTAGGGA	70209089	True	NA	-6	True	CATAAA	-22	NA	70221395	70250392	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249930_70250048_70250364
transcript_102562.known	chr19	-	1805	9	FSM	ENSG00000105131.8	ENST00000602233.5	1805	9	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_8	71.0447702156886	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCACCAGCTGTATTTCA	-15233408	False	NA	-9	True	AATACA	-19	NA	15233435	15226924	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15227663_15227770_15227908_15227996_15228101_15230961_15231091_15231238_15231397_15231775_15231862_15231968_15232257_15232919_15233001_15233351
transcript_102567.nnic	chr19	-	1753	8	NIC	ENSG00000105131.8	novel	1805	9	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	2	15	junction_7	69.8496928542763	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCAGCTGTATTTCATTT	-15233434	False	NA	-6	True	AATACA	-22	NA	15233461	15226921	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_15227663_15227770_15227908_15227996_15228101_15230961_15231091_15231238_15231397_15231775_15231862_15231968_15232257_15233351
transcript_102578.known	chr19	-	1838	7	FSM	ENSG00000105131.8	ENST00000221730.8	1838	7	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_6	21.2896688560438	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTGTATTTCATTTTTT	-15229806	True	NA	-3	True	AATACA	-25	NA	15232448	15226918	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15227663_15227770_15227908_15227996_15228101_15230961_15231091_15231238_15231397_15231775_15231862_15231968
transcript_102584.known	chr19	-	1821	9	FSM	ENSG00000141867.19	ENST00000594841.5	1821	9	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_8	395.557972205087	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACGAAGAAAAATAATAGCAG	-15320006	False	11900	7	True	AATAAA	-34	NA	15331906	15256098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15256264_15256963_15257174_15263419_15263549_15264403_15264767_15265353_15265644_15267415_15267552_15268904_15269043_15272814_15273134_15331835
transcript_102614.known	chr19	-	2113	16	FSM	ENSG00000011243.19	ENST00000609519.5	2113	16	0	0	0	0	multi-exon	FALSE	canonical	2	174	junction_6	263.308150694623	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGGGTTTCTCTGTTAC	-15408792	True	NA	-10	True	AATAAA	-15	NA	15418988	15380049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15398629_15398767_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403556_15403657_15403716_15404009_15404043_15410519_15410595_15418910
transcript_102621.known	chr19	-	3715	15	FSM	ENSG00000105127.10	ENST00000598597.7	3715	15	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	74.1124696880714	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCCTCTGGGTCATTTC	-15375292	True	NA	1	True	AATAAA	-17	NA	15379815	15353520	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15355371_15358966_15359063_15360847_15360979_15361728_15361823_15362109_15362252_15368234_15368323_15369066_15369225_15370145_15370180_15371951_15371999_15372217_15372348_15372850_15373341_15373785_15374066_15374602_15374636_15376975_15377015_15379712
transcript_102636.known	chr19	-	2172	15	FSM	ENSG00000011243.19	ENST00000680303.1	2172	15	0	0	0	0	multi-exon	FALSE	canonical	2	37	junction_6	277.530298033441	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGGAAACCAAACCTAATA	-15408848	True	NA	-46	True	NA	NA	NA	15419044	15380085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15398629_15398704_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
transcript_102638.known	chr19	-	2200	15	FSM	ENSG00000011243.19	ENST00000681459.1	2200	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	283.972269772948	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGGAAACCAAACCTAATA	-15408848	True	NA	-46	True	NA	NA	NA	15419044	15380085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15398629_15398732_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
transcript_102643.known	chr19	-	2235	15	FSM	ENSG00000011243.19	ENST00000680803.1	2235	15	0	0	0	0	multi-exon	FALSE	canonical	2	174	junction_6	252.985721949291	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGGAAACCAAACCTAATA	-15408848	True	NA	-46	True	NA	NA	NA	15419044	15380085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15398629_15398767_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
transcript_102650.nic	chr19	-	2709	15	NIC	ENSG00000011243.19	novel	2113	16	NA	NA	-5	0	intron_retention	FALSE	canonical	2	224	junction_5	221.209211621312	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGGGTTTCTCTGTTAC	-15408853	True	NA	-10	True	AATAAA	-15	NA	15419049	15380049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15398629_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403556_15403657_15403716_15404009_15404043_15410519_15410595_15418910
transcript_102654.known	chr19	-	1946	15	FSM	ENSG00000011243.19	ENST00000681170.1	1946	15	0	0	0	0	multi-exon	FALSE	canonical	2	74	junction_11	231.547544375064	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTCCCATCCCACCTC	-15408773	True	NA	-26	True	NA	NA	NA	15418969	15380065	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403556_15403652_15403716_15404009_15404043_15410519_15410595_15418910
transcript_102670.known	chr19	-	4311	14	FSM	ENSG00000105127.10	ENST00000680336.1	4311	14	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	76.2228902238877	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAGTGCAGAAAAACATCA	-15375264	True	NA	NA	False	ATTAAA	-2	NA	15379787	15353399	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15355371_15358966_15359063_15360847_15360979_15361728_15361823_15362109_15362252_15368234_15368323_15369066_15369225_15370145_15370180_15371951_15371999_15372217_15373341_15373785_15374066_15374602_15374636_15376975_15377015_15379712
transcript_102673.known	chr19	-	3665	14	FSM	ENSG00000105127.10	ENST00000269701.7	3665	14	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_13	14.9555554578643	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCACTAGTGGAACTGCTT	-15375264	True	NA	NA	False	ATTAAA	-17	NA	15379787	15353384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15355371_15358966_15359063_15360847_15360979_15361728_15361823_15362109_15362252_15368234_15368323_15370145_15370180_15371951_15371999_15372217_15372348_15372850_15373341_15373785_15374066_15374602_15374636_15376975_15377015_15379712
transcript_102682.known	chr19	-	2057	14	FSM	ENSG00000011243.19	ENST00000679638.1	2057	14	0	0	0	0	multi-exon	FALSE	canonical	2	46	junction_3	246.321817689425	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGGGTTTCTCTGTTAC	-15408848	True	NA	-10	True	AATAAA	-15	NA	15419044	15380049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15380431_15380516_15380613_15397149_15397204_15397519_15397626_15397713_15397856_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
transcript_10269.nic	chr1	+	1399	10	ISM	ENSG00000116754.14	ENST00000370949.2	3959	12	-24	3005	-14	-678	5prime_fragment	FALSE	canonical	3	871	junction_2	86.5235285205956	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAATGTTAATCATTTA	70209049	True	NA	7	True	AAGAAA	-28	NA	70221355	70250047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951
transcript_102691.known	chr19	-	3056	14	FSM	ENSG00000011243.19	ENST00000680302.1	3056	14	0	0	0	0	multi-exon	FALSE	canonical	2	37	junction_6	287.909029847026	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGGAAACCAAACCTAATA	-15408848	True	NA	-46	True	NA	NA	NA	15419044	15380085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15398629_15398704_15399301_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
transcript_102696.known	chr19	-	3119	14	FSM	ENSG00000011243.19	ENST00000680103.1	3119	14	0	0	0	0	multi-exon	FALSE	canonical	2	174	junction_6	262.49384326395	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGGAAACCAAACCTAATA	-15408848	True	NA	-46	True	NA	NA	NA	15419044	15380085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15398629_15398767_15399301_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
transcript_102697.known	chr19	-	2749	14	FSM	ENSG00000011243.19	ENST00000593845.5	2749	14	0	0	0	0	multi-exon	FALSE	canonical	2	224	junction_5	197.311545921282	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCGGGTTTCTCTGTTA	-15408792	True	NA	-11	True	AATAAA	-14	NA	15418988	15380050	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15398629_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
transcript_1027.known	chr1	+	2481	16	FSM	ENSG00000197785.14	ENST00000378756.8	2481	16	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_14	58.3011339702945	1479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCCTGTCTGTCTCTTGG	1499132	True	NA	28	True	AATAAA	-18	NA	1512161	1534685	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1512474_1516011_1516089_1517310_1517413_1517715_1517776_1518920_1518991_1520140_1520307_1520547_1520618_1522743_1522900_1523510_1523568_1523838_1523965_1524272_1524398_1525239_1525292_1526460_1526532_1527694_1527863_1529222_1529332_1533925
transcript_102704.known	chr19	-	2078	14	FSM	ENSG00000011243.19	ENST00000397410.10	2078	14	0	0	0	0	multi-exon	FALSE	canonical	2	592	junction_5	121.209535430551	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGGGTTTCTCTGTTAC	-15408792	True	NA	-10	True	AATAAA	-15	NA	15418988	15380049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
transcript_102705.known	chr19	-	1933	14	FSM	ENSG00000011243.19	ENST00000595465.6	1933	14	0	0	0	0	multi-exon	FALSE	canonical	2	29	junction_10	250.696379224378	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGGGTTTCTCTGTTAC	-15408830	True	NA	-10	True	AATAAA	-15	NA	15419026	15380049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403657_15403716_15404009_15404043_15410519_15410595_15418910
transcript_102712.known	chr19	-	3009	14	FSM	ENSG00000011243.19	ENST00000679634.1	3009	14	0	0	0	0	multi-exon	FALSE	canonical	2	174	junction_5	209.067838145291	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGGAAACCAAACCTAATA	-15408848	True	NA	-46	True	NA	NA	NA	15419044	15380085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15398767_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
transcript_102715.known	chr19	-	3424	14	FSM	ENSG00000011243.19	ENST00000680865.1	3424	14	0	0	0	0	multi-exon	FALSE	canonical	2	383	junction_10	161.551684440498	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGGAAACCAAACCTAATA	-15408830	True	NA	-46	True	NA	NA	NA	15419026	15380085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403556_15403657_15403716_15404009_15404043_15410519_15410595_15418910
transcript_102716.known	chr19	-	3998	14	FSM	ENSG00000011243.19	ENST00000680957.1	3998	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	274.857058062666	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGGAAACCAAACCTAATA	-15408830	True	NA	-46	True	NA	NA	NA	15419026	15380085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15399985_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403556_15403657_15403716_15404009_15404043_15410519_15410595_15418910
transcript_102729.known	chr19	-	3609	13	FSM	ENSG00000105127.10	ENST00000680245.1	3609	13	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_12	61.5987802007655	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAGTGCAGAAAAACATCA	-15375262	True	NA	NA	False	ATTAAA	-2	NA	15379785	15353399	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15355371_15358966_15359063_15360847_15360979_15361728_15361823_15362109_15362252_15368234_15368323_15370145_15370180_15371951_15371999_15372217_15372348_15372850_15373341_15373785_15374066_15374602_15374636_15379712
transcript_10274.nic	chr1	+	1065	9	ISM	ENSG00000116754.14	ENST00000370951.5	2385	13	-12	6802	-12	-5910	5prime_fragment	FALSE	canonical	3	220	junction_1	286.178593713786	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAGCATTGGGTGAGAAA	70199706	True	NA	16	True	AAAACA	-3	NA	70205669	70244815	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_70205781_70221614_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683
transcript_102744.known	chr19	-	3654	13	FSM	ENSG00000011243.19	ENST00000680774.1	3654	13	0	0	0	0	multi-exon	FALSE	canonical	2	224	junction_5	205.170457587506	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGGAAACCAAACCTAATA	-15408848	True	NA	-46	True	NA	NA	NA	15419044	15380085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15398629_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
transcript_102746.known	chr19	-	2390	13	FSM	ENSG00000011243.19	ENST00000596213.6	2390	13	0	0	0	0	multi-exon	FALSE	canonical	3	592	junction_5	112.76006976467	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTCCCATCCCACCTC	-15408826	True	NA	-26	True	NA	NA	NA	15419022	15380065	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15404043_15410519_15410595_15418910
transcript_102748.known	chr19	-	3907	13	FSM	ENSG00000011243.19	ENST00000595879.6	3907	13	0	0	0	0	multi-exon	FALSE	canonical	2	592	junction_5	125.546886991806	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAATAAAGTTTTCCCATC	-15408773	True	NA	-33	True	NA	NA	NA	15418969	15380072	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15403716_15404009_15404043_15410519_15410595_15418910
transcript_102749.known	chr19	-	2995	13	FSM	ENSG00000011243.19	ENST00000680703.1	2995	13	0	0	0	0	multi-exon	FALSE	canonical	2	592	junction_5	124.936539446588	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAATAAAGTTTTCCCATC	-15408848	True	NA	-33	True	NA	NA	NA	15419044	15380072	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15399301_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
transcript_10275.nic	chr1	+	1007	9	NIC	ENSG00000116754.14	novel	3959	12	NA	NA	-22	-5910	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	341.635748092907	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAGCATTGGGTGAGAAA	NA	False	NA	16	True	AAAACA	-3	NA	70221347	70244815	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_70221401_70221614_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683
transcript_102753.known	chr19	-	3544	13	FSM	ENSG00000011243.19	ENST00000681744.1	3544	13	0	0	0	0	multi-exon	FALSE	canonical	2	662	junction_10	99.460908010244	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGGAAACCAAACCTAATA	-15408848	True	NA	-46	True	NA	NA	NA	15419044	15380085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
transcript_102755.known	chr19	-	4308	13	FSM	ENSG00000011243.19	ENST00000681405.1	4308	13	0	0	0	0	multi-exon	FALSE	canonical	2	383	junction_9	167.668882523462	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGGAAACCAAACCTAATA	-15408830	True	NA	-46	True	NA	NA	NA	15419026	15380085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403556_15403657_15403716_15404009_15404043_15410519_15410595_15418910
transcript_10277.nic	chr1	+	1330	9	NIC	ENSG00000116754.14	novel	2285	16	NA	NA	-14	-5910	intron_retention	FALSE	canonical	3	62	junction_2	401.959400157528	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAGCATTGGGTGAGAAA	70209049	True	NA	16	True	AAAACA	-3	NA	70221355	70244815	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_70221840_70228421_70228556_70231858_70231976_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683
transcript_102796.known	chr19	-	2251	16	FSM	ENSG00000011243.19	ENST00000594594.6	2251	16	0	0	0	0	multi-exon	FALSE	canonical	2	74	junction_12	300.621681778869	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGGGTTTCTCTGTTAC	-15419110	False	NA	-10	True	AATAAA	-15	NA	15419121	15380049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15398629_15398767_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403556_15403652_15403716_15404009_15404043_15410519_15410595_15418910
transcript_102798.known	chr19	-	1453	8	FSM	ENSG00000011243.19	ENST00000594893.5	1453	8	0	0	0	0	multi-exon	FALSE	canonical	2	662	junction_5	103.393837893202	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCAGTTTTTACGGCTCT	-15408772	True	NA	NA	False	NA	NA	NA	15418968	15399934	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
transcript_102808.known	chr19	-	583	4	FSM	ENSG00000011243.19	ENST00000601147.2	583	4	0	0	0	0	multi-exon	FALSE	canonical	2	662	junction_1	134.636135152822	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACTTGTGTCTCCTCTCA	-15408792	True	NA	NA	False	NA	NA	NA	15418988	15403318	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_15403716_15404009_15404043_15410519_15410595_15418910
transcript_102814.known	chr19	+	2609	14	FSM	ENSG00000171954.13	ENST00000269703.8	2609	14	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_7	2.76281307631815	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGTGTTCATTTATTT	15508387	True	NA	2	True	CATAAA	-19	NA	15508524	15552317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_15508584_15523692_15523800_15525335_15525559_15529708_15529854_15537360_15537415_15537534_15537663_15537871_15537994_15540449_15540718_15543970_15544038_15544149_15544280_15548107_15548242_15549137_15549203_15550673_15550757_15551293
transcript_102819.known	chr19	+	2598	9	FSM	ENSG00000167460.17	ENST00000646974.2	2598	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1254.20751248547	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTTGCGTGAATTTTAGA	NA	False	NA	11	True	AATAAA	-16	NA	16067537	16103002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_16067739_16076046_16076173_16081912_16082047_16086422_16086541_16088026_16088098_16089044_16089121_16093535_16093599_16093683_16093754_16101263
transcript_102824.known	chr19	+	2491	9	FSM	ENSG00000167460.17	ENST00000586833.7	2491	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	1245.78978463463	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAATAGTATCACTTTT	16076093	True	NA	21	True	AATAAA	-32	NA	16077015	16102946	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_16077131_16080914_16081076_16081912_16082047_16086422_16086541_16088026_16088098_16089044_16089121_16093535_16093599_16093683_16093754_16101263
transcript_10283.nic	chr1	+	1213	8	ISM	ENSG00000116754.14	ENST00000395136.7	1717	12	-40	5990	-14	-5910	5prime_fragment	FALSE	canonical	3	871	junction_2	95.5898978523807	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAGCATTGGGTGAGAAA	70209049	True	NA	16	True	AAAACA	-3	NA	70221355	70244815	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683
transcript_102833.known	chr19	+	2474	8	FSM	ENSG00000167460.17	ENST00000643579.2	2474	8	0	0	0	0	multi-exon	FALSE	canonical	3	2686	junction_2	105.607088506677	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTTGCGTGAATTTTAGA	16034689	True	NA	11	True	AATAAA	-16	NA	16076494	16103002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_16076698_16081912_16082047_16086422_16086541_16088026_16088098_16089044_16089121_16093535_16093599_16093683_16093754_16101263
transcript_102847.known	chr19	-	3103	1	FSM	ENSG00000279198.1	ENST00000624324.1	3103	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGTCTATGGTGTTTTG	-16077380	True	NA	0	True	AATAAA	-18	NA	16077395	16074292	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_16074300_16077400
transcript_102853.known	chr19	+	2567	8	FSM	ENSG00000167461.12	ENST00000300935.8	2567	8	0	0	0	0	multi-exon	FALSE	canonical	3	943	junction_6	82.8551723903628	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGTAATGTGTCTTTTG	16103152	True	NA	16	True	NA	NA	NA	16111888	16134234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_16112026_16118225_16118287_16121749_16121811_16125469_16125548_16127436_16127527_16128025_16128092_16129553_16129605_16132211
transcript_102856.known	chr19	+	1315	8	FSM	ENSG00000167461.12	ENST00000586682.1	1315	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	383.057889800975	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATCAAGGGGACGCTGTG	16103160	True	NA	NA	False	NA	NA	NA	16111896	16133010	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_16112026_16118225_16118287_16121749_16121811_16125469_16125548_16127436_16127527_16128025_16128092_16129573_16129605_16132211
transcript_102867.known	chr19	+	1957	6	FSM	ENSG00000196684.12	ENST00000613986.4	1957	6	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_5	1.95959179422654	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGCTGCAGGGTCTCTCT	16143559	True	NA	NA	False	AATAAA	-33	NA	16143684	16158575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_16143775_16148723_16148876_16152551_16152642_16153042_16153209_16154398_16154492_16157209
transcript_102868.known	chr19	+	1754	4	FSM	ENSG00000167461.12	ENST00000589697.1	1754	4	0	0	0	0	multi-exon	FALSE	canonical	3	1076	junction_1	27.7408643620842	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAACAAAAAAAAAA	16103178	False	NA	NA	False	NA	NA	NA	16111914	16126990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_16112026_16118225_16118287_16121749_16121811_16125469
transcript_10287.nic	chr1	+	849	7	ISM	ENSG00000116754.14	ENST00000370951.5	2385	13	-12	14067	-12	0	5prime_fragment	FALSE	canonical	3	220	junction_1	302.028512267008	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTAAACAATGTTTATGCA	70199706	True	NA	65	True	NA	NA	NA	70205669	70237550	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_70205781_70221614_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424
transcript_102870.known	chr19	+	578	3	FSM	ENSG00000167461.12	ENST00000590899.5	578	3	0	0	0	0	multi-exon	FALSE	canonical	3	1076	junction_1	23.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTCACATGACCTGCAT	16103155	True	NA	NA	False	NA	NA	NA	16111891	16122132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_16112026_16118225_16118287_16121749
transcript_102871.known	chr19	+	1463	4	FSM	ENSG00000105058.12	ENST00000263384.12	1463	4	0	0	0	0	multi-exon	FALSE	canonical	3	987	junction_2	40.8765077873452	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGAGTGTCTTCTTTTTT	16175642	True	NA	19	True	AATAAA	-21	NA	16185409	16192046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_16185517_16185623_16185766_16190519_16190574_16190886
transcript_102872.known	chr19	+	798	3	FSM	ENSG00000105058.12	ENST00000588367.5	798	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	518	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGCAACTATGCGGCCTT	16175655	True	NA	NA	False	NA	NA	NA	16185422	16191448	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_16185517_16185623_16185766_16190886
transcript_102873.known	chr19	+	2311	13	FSM	ENSG00000072958.9	ENST00000444449.6	2311	13	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_6	129.688381857778	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCCTTCCTCTGATGCA	16197374	True	NA	20	True	ATTAAA	-20	NA	16197933	16235345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_16198069_16203458_16203616_16206340_16206409_16208018_16208150_16209029_16209178_16210359_16210396_16226420_16226548_16227547_16227691_16228136_16228209_16228769_16228929_16233492_16233619_16234198_16234275_16234412
transcript_102876.known	chr19	+	12859	12	FSM	ENSG00000072958.9	ENST00000291439.8	12859	12	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_6	26.5227175352479	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTCATTGTTTTCCTTT	16197351	True	NA	NA	False	AATAAA	-23	NA	16197910	16245906	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_16198069_16203458_16203616_16206340_16206409_16208018_16208150_16209029_16209178_16226420_16226548_16227547_16227691_16228136_16228209_16228769_16228929_16233492_16233619_16234198_16234275_16234412
transcript_102881.known	chr19	+	625	4	FSM	ENSG00000072958.9	ENST00000589991.1	625	4	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_1	4.10960933531265	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCACCTCCAGCAGTATT	16197353	True	NA	NA	False	NA	NA	NA	16197912	16208262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_16198069_16203458_16203616_16206340_16206409_16208018
transcript_102882.known	chr19	+	2820	3	FSM	ENSG00000127528.6	ENST00000248071.6	2820	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	0.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTGATGAAGGGTGTGA	16324810	True	NA	NA	False	AGTAAA	-19	NA	16324825	16328685	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_16324999_16325215_16326033_16326855
transcript_102883.known	chr19	-	3216	24	FSM	ENSG00000127527.14	ENST00000455140.7	3216	24	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	59.85616028769	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGAAGCTTCTTTAATC	-16468950	True	NA	NA	False	TATAAA	-42	NA	16471970	16355246	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_16355852_16361778_16361985_16377121_16377255_16385128_16385212_16386170_16386232_16392303_16392441_16393950_16394002_16395343_16395468_16402320_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440861_16440910_16441891_16441982_16442177_16442220_16471912
transcript_102886.known	chr19	-	2924	23	FSM	ENSG00000127527.14	ENST00000248070.10	2924	23	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	48.4370811098923	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTTGGATGCTCTATCA	-16469065	True	NA	-21	True	AATAAA	-14	NA	16472085	16361580	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_16361985_16377121_16377255_16385128_16385212_16386170_16386232_16392303_16392441_16393950_16394002_16395343_16395468_16402320_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440861_16440910_16441891_16441982_16442177_16442220_16471912
transcript_102888.nnic	chr19	-	2894	22	NIC	ENSG00000127527.14	novel	3216	24	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	3	96	junction_1	31.4863826161316	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGAAGCTTCTTTAATC	-16468967	True	NA	NA	False	TATAAA	-42	NA	16471987	16355246	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_16355852_16385128_16385212_16386170_16386232_16392303_16392441_16393950_16394002_16395343_16395468_16402320_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440861_16440910_16441891_16441982_16442177_16442220_16471912
transcript_102889.known	chr19	-	2666	22	FSM	ENSG00000127527.14	ENST00000535753.6	2666	22	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	37.6890848944546	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGAGCCGCAG	-16468956	True	NA	-37	True	AAGAAA	-15	NA	16471976	16361596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_16361985_16385128_16385212_16386170_16386232_16392303_16392441_16393950_16394002_16395343_16395468_16402320_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440861_16440910_16441891_16441982_16442177_16442220_16471912
transcript_102893.known	chr19	-	743	6	FSM	ENSG00000127527.14	ENST00000597559.5	743	6	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_2	18.2252571998312	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATAGAAGAGGAAACGGT	-16468955	True	NA	NA	False	NA	NA	NA	16471975	16436595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_16437000_16437769_16437866_16440861_16440910_16441891_16441982_16442177_16442220_16471912
transcript_102897.known	chr19	-	4075	17	FSM	ENSG00000085872.15	ENST00000546361.7	4075	17	0	0	0	0	multi-exon	FALSE	canonical	3	434	junction_3	51.9256905948298	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCTCCCGCACATGTGT	-16532863	True	NA	-12	True	AATAAA	-16	NA	16542437	16517893	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_16519353_16519620_16519716_16520148_16520266_16520363_16520508_16520825_16520913_16521520_16521655_16523051_16523291_16525241_16525678_16528079_16528256_16529647_16529901_16530584_16530675_16530768_16530881_16532597_16532750_16533010_16533149_16535451_16535637_16541869_16542044_16542353
transcript_102898.known	chr19	-	4084	17	FSM	ENSG00000085872.15	ENST00000198939.6	4084	17	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_12	130.285743656012	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTTTCTCCCGCACATGT	-16532841	True	NA	-14	True	AATAAA	-14	NA	16542415	16517895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_16519353_16519620_16519716_16520148_16520266_16520363_16520508_16520825_16520913_16521520_16521655_16523051_16523291_16525241_16525678_16528079_16528256_16529647_16529901_16530584_16530675_16530768_16530914_16532597_16532750_16533010_16533149_16535451_16535637_16541869_16542044_16542353
transcript_102900.nic	chr19	-	2930	15	ISM	ENSG00000085872.15	ENST00000546361.7	4075	17	2	1844	2	166	5prime_fragment	FALSE	canonical	3	434	junction_1	49.9442546388328	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAACCTGTCTCGATTTT	-16532861	True	NA	NA	False	AATAAA	-23	NA	16542435	16519737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_16520266_16520363_16520508_16520825_16520913_16521520_16521655_16523051_16523291_16525241_16525678_16528079_16528256_16529647_16529901_16530584_16530675_16530768_16530881_16532597_16532750_16533010_16533149_16535451_16535637_16541869_16542044_16542353
transcript_102908.nic	chr19	-	2277	10	ISM	ENSG00000085872.15	ENST00000546361.7	4075	17	2	6869	2	-4859	5prime_fragment	FALSE	canonical	3	469	junction_1	47.4164632554382	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACTTTTCTTTTTTAAAAA	-16532861	True	NA	NA	False	AAAACA	-6	NA	16542435	16524762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_16525678_16528079_16528256_16529647_16529901_16530584_16530675_16530768_16530881_16532597_16532750_16533010_16533149_16535451_16535637_16541869_16542044_16542353
transcript_102910.nic	chr19	+	2728	9	NIC	ENSG00000105072.9	novel	3346	9	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_5	8.61684396980704	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAAAGTTTTGTGTTTCTG	16495747	True	NA	21	True	AGTAAA	-32	NA	16496370	16518619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_16496466_16500791_16501552_16503064_16503381_16506700_16506775_16509498_16509989_16513013_16513110_16514496_16514664_16517229_16517342_16518001
transcript_102911.known	chr19	+	3346	9	FSM	ENSG00000105072.9	ENST00000221671.8	3346	9	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	3.86490620843508	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACGTGTGTGCTGTGCCT	16495770	True	NA	4	True	ATTAAA	-17	NA	16496393	16521352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_16496466_16500791_16501552_16503064_16503381_16506700_16506775_16509498_16509989_16513013_16513110_16514496_16514664_16517229_16517342_16520093
transcript_102914.known	chr19	+	2609	8	FSM	ENSG00000105072.9	ENST00000594035.5	2609	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	10.913388145591	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAAAGTTTTGTGTTTCTG	16495770	True	NA	21	True	AGTAAA	-32	NA	16496393	16518619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_16496466_16500791_16501552_16503064_16503381_16506700_16506775_16509498_16509989_16514496_16514664_16517229_16517342_16518001
transcript_10293.nic	chr1	+	997	6	ISM	ENSG00000116754.14	ENST00000395136.7	1717	12	-40	13255	-14	0	5prime_fragment	FALSE	canonical	3	871	junction_2	85.0397554088674	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTAAACAATGTTTATGCA	70209049	True	NA	65	True	NA	NA	NA	70221355	70237550	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424
transcript_102931.nnic	chr19	-	2823	7	NNC	ENSG00000127526.15	novel	5126	6	NA	NA	-11	-163	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	43.0761599444003	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCAGGCATGGTGGCAC	-16571437	True	NA	NA	False	ACTAAA	-8	NA	16572426	16551921	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_16553910_16555151_16555398_16566531_16566658_16568031_16568170_16571511_16571583_16571943_16572112_16572340
transcript_102934.nnic	chr19	-	2407	7	NNC	ENSG00000127526.15	novel	5126	6	NA	NA	-11	-579	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	43.0761599444003	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTCCCACTGGTGATG	-16571437	True	NA	NA	False	AAAACA	-9	NA	16572426	16552337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_16553910_16555151_16555398_16566531_16566658_16568031_16568170_16571511_16571583_16571943_16572112_16572340
transcript_102937.known	chr19	-	5126	6	FSM	ENSG00000127526.15	ENST00000595753.6	5126	6	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_3	19.5489130132598	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAATTGGTCCCGATTTG	-16571426	True	NA	-15	True	AATAAA	-18	NA	16572415	16549836	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_16553910_16555151_16555398_16566531_16566658_16568031_16568170_16571511_16571583_16571943
transcript_102953.known	chr19	-	1444	4	FSM	ENSG00000105085.11	ENST00000611692.4	1444	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	35.7988205888903	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCGGCCTGTCAGCCACA	-16627910	False	NA	NA	False	NA	NA	NA	16627943	16576029	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_16577249_16577604_16577683_16578334_16578410_16627871
transcript_102957.known	chr19	-	3172	3	FSM	ENSG00000105085.11	ENST00000263390.8	3172	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	8.5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCACAAACCAGTCTGAG	-16626752	True	NA	NA	False	AATAAA	-17	NA	16628204	16574918	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_16577683_16578334_16578410_16627871
transcript_102959.known	chr19	+	2717	1	FSM	ENSG00000279529.1	ENST00000623966.1	2717	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTGCAGCATTTCTT	16572479	True	NA	NA	False	AATAAA	-14	NA	16572623	16575340	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_16572600_16575300
transcript_10296.known	chr1	+	617	3	FSM	ENSG00000116754.14	ENST00000463877.1	617	3	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	457	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTAGGTCTGTTATTAT	70199734	True	NA	NA	False	NA	NA	NA	70205697	70228727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_70205781_70221611_70221840_70228421
transcript_102960.known	chr19	-	1281	5	FSM	ENSG00000214046.9	ENST00000465250.6	1281	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	296.788961216552	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCGTGTGTGTGTTGTGT	-16651479	True	NA	-20	True	AATAAA	-7	NA	16660130	16630750	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_16631725_16647095_16647262_16659394_16659448_16659958_16660001_16660084
transcript_102961.known	chr19	-	1360	5	FSM	ENSG00000214046.9	ENST00000487416.7	1360	5	0	0	0	0	multi-exon	FALSE	canonical	3	640	junction_1	34.3611335668659	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTGTTTATACTTTTTT	-16651493	True	NA	-1	True	AATAAA	-19	NA	16660144	16646147	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_16647262_16654034_16654126_16659394_16659448_16659958_16660001_16660084
transcript_102962.known	chr19	-	1065	6	FSM	ENSG00000214046.9	ENST00000593404.5	1065	6	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	212.5338561265	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTGTTTATACTTTTTT	-16651493	True	NA	-1	True	AATAAA	-19	NA	16660144	16646147	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_16646801_16647095_16647262_16654034_16654126_16659394_16659448_16659958_16660001_16660084
transcript_102963.known	chr19	-	534	5	FSM	ENSG00000214046.9	ENST00000602194.5	534	5	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	270.613539018283	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATGACTTTGGGAGCCA	-16651493	True	NA	-39	True	NA	NA	NA	16660144	16646587	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_16646801_16647095_16647262_16659394_16659448_16659958_16660001_16660084
transcript_102964.known	chr19	-	850	5	FSM	ENSG00000214046.9	ENST00000358726.6	850	5	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	263.923639524769	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGCCTGCCTATAGTTC	-16651491	True	NA	NA	False	AATAAA	-18	NA	16660142	16652355	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_16652962_16654034_16654126_16659394_16659448_16659958_16660001_16660084
transcript_102965.known	chr19	+	2631	6	FSM	ENSG00000072954.7	ENST00000187762.7	2631	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	30.3802567467755	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCATGGCTTGTCTGATT	16659956	True	NA	NA	False	AATAAA	-15	NA	16661138	16690023	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_16661342_16679983_16680141_16680396_16680582_16682420_16682509_16686287_16686406_16688143
transcript_102968.nnic	chr19	+	1593	5	NNC	ENSG00000072954.7	novel	2631	6	NA	NA	-26	3393	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	53.6213576851612	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCAGGTGTGGTGGTGT	16659930	True	NA	NA	False	AAAAAG	-11	NA	16661112	16684330	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_16661342_16679983_16680141_16680396_16680582_16682420_16683025_16683912
transcript_102970.known	chr19	+	798	3	FSM	ENSG00000072954.7	ENST00000595452.1	798	3	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	8.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACGAGATGCCAGTAGCACA	16660059	False	NA	NA	False	NA	NA	NA	16661241	16680937	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_16661342_16679983_16680141_16680396
transcript_102972.known	chr19	+	5129	20	FSM	ENSG00000127511.10	ENST00000379803.5	5129	20	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_10	118.828422129628	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCGTGAGGGTGTGTTGG	16819025	True	NA	27	True	ATTAAA	-24	NA	16829406	16880353	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_16829541_16829790_16829898_16831493_16831648_16841767_16841969_16846969_16847114_16851411_16851535_16853068_16853159_16854142_16854262_16862351_16862560_16862883_16862980_16863679_16863797_16865409_16865649_16866372_16866557_16869459_16870076_16871228_16871399_16876054_16876229_16876485_16876579_16877544_16877640_16878182_16878391_16878496
transcript_102979.known	chr19	+	5038	19	FSM	ENSG00000127511.10	ENST00000248054.10	5038	19	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_9	103.191434829748	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAAGCCGTGAGGGTGTG	16819016	True	NA	23	True	ATTAAA	-20	NA	16829397	16880349	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_16829541_16829790_16829898_16831493_16831648_16841767_16841969_16846969_16847114_16851411_16851535_16853068_16853159_16854142_16854262_16862351_16862560_16863679_16863797_16865409_16865649_16866372_16866557_16869459_16870076_16871228_16871399_16876054_16876229_16876485_16876579_16877544_16877640_16878182_16878391_16878496
transcript_102992.nnic	chr19	+	2954	9	NNC	ENSG00000127511.10	novel	2556	8	NA	NA	-43	1356	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	126.692972871426	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCATCCTGTTTTTAGTAG	16818973	True	NA	7	True	AATAAA	-18	NA	16829354	16857101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_16829541_16829790_16829898_16831493_16831648_16841767_16841969_16846969_16847114_16851411_16851535_16853068_16853159_16854142_16855637_16856646
transcript_102993.known	chr19	+	2556	8	FSM	ENSG00000127511.10	ENST00000596802.5	2556	8	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_7	27.6767050061961	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTCTAACCCTTGGGT	16819025	True	NA	NA	False	AAAACA	-15	NA	16829406	16855745	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_16829541_16829790_16829898_16831493_16831648_16841767_16841969_16846969_16847114_16851411_16851535_16853068_16853159_16854142
transcript_103000.nic	chr19	+	914	6	ISM	ENSG00000127511.10	ENST00000596802.5	2556	8	-52	4212	-43	-4212	5prime_fragment	FALSE	canonical	3	377	junction_4	16.0424437041244	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACCTGTGAGCCACATGC	16818973	True	NA	NA	False	NA	NA	NA	16829354	16851533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_16829541_16829790_16829898_16831493_16831648_16841767_16841969_16846969_16847114_16851411
transcript_103010.known	chr19	-	3486	2	FSM	ENSG00000160111.15	ENST00000600235.5	3486	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTTCTGGGGTGCACAT	-16896909	True	NA	-3	True	AATACA	-18	NA	16896973	16892953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_16896327_16896860
transcript_103011.known	chr19	-	1055	11	FSM	ENSG00000131351.15	ENST00000598517.5	1055	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	86.0853646097872	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATCAAGACAGTGCCTGC	-17071970	True	NA	NA	False	NA	NA	NA	17075422	17050063	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_17050177_17052824_17052967_17055860_17056003_17058548_17058708_17058810_17058877_17059556_17059652_17059996_17060093_17062697_17062780_17069030_17069100_17073273_17073336_17075393
transcript_103014.nic	chr19	-	1291	10	NIC	ENSG00000131351.15	novel	1407	11	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_7	84.4043764589971	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGCCTCCATTTTCTAT	-17072003	True	NA	-36	True	AGTAAA	-13	NA	17075455	17049765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_17050177_17052824_17052967_17055860_17056003_17058548_17058708_17058810_17058877_17059556_17059652_17059996_17060093_17069030_17069087_17073273_17073336_17075393
transcript_103018.known	chr19	-	3176	10	FSM	ENSG00000131351.15	ENST00000593360.1	3176	10	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_7	18.6785676348292	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGCCTCCATTTTCTAT	-17075160	False	NA	-36	True	AGTAAA	-13	NA	17075200	17049765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_17050177_17052824_17052967_17055860_17056003_17058548_17058708_17058810_17058877_17059556_17059652_17059996_17060093_17062697_17062780_17069030_17069087_17073273
transcript_103019.known	chr19	+	7623	40	FSM	ENSG00000099331.14	ENST00000595618.5	7623	40	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_38	46.2943729602676	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGACGCCTGCTCATATGG	17071898	True	NA	16	True	AATAAA	-23	NA	17075780	17213295	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17075875_17101659_17102558_17145396_17145492_17152643_17152707_17153966_17154067_17154314_17154416_17156908_17157039_17159394_17159485_17162349_17162467_17162987_17163123_17167942_17168065_17172335_17172478_17172758_17172964_17175662_17175742_17180926_17181041_17183828_17183869_17184864_17184988_17185920_17186002_17187934_17188046_17191096_17191220_17192745_17193063_17194555_17195474_17197791_17197859_17198183_17198309_17200292_17200427_17200638_17200830_17201925_17202025_17202129_17202304_17202841_17202884_17203146_17203259_17205262_17205337_17205959_17206153_17206247_17206377_17206678_17206785_17207112_17207245_17209585_17209710_17210332_17210381_17210714_17210849_17211646_17211787_17211894
transcript_103026.nic	chr19	+	4492	25	ISM	ENSG00000099331.14	ENST00000682292.1	7606	40	-52	12948	-52	-5795	5prime_fragment	FALSE	canonical	3	129	junction_6	19.4035631750689	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGCCTGGAGGGCGCAGA	17071842	True	NA	NA	False	CATAAA	-16	NA	17075724	17200338	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_17075875_17101659_17102558_17145396_17145492_17152643_17152707_17153966_17154067_17154314_17154416_17156908_17157039_17159394_17159485_17162349_17162467_17162987_17163123_17167942_17168065_17172335_17172478_17172758_17172964_17175662_17175742_17180926_17181041_17183828_17183869_17184864_17184988_17185920_17186002_17187934_17188046_17191096_17191220_17192745_17193063_17194555_17195474_17197791_17197859_17198183_17198309_17200292
transcript_103030.nnic	chr19	+	2762	18	NIC	ENSG00000099331.14	novel	7606	40	NA	NA	-52	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_15	48.0074244546421	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCCACCAAGCATCAGC	17071842	True	NA	NA	False	NA	NA	NA	17075724	17184955	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_17075875_17101659_17102558_17145396_17145492_17152643_17152707_17153966_17154067_17154314_17154416_17156908_17157039_17159394_17159485_17162349_17162467_17162987_17163123_17167942_17168065_17172335_17172478_17172758_17172964_17175662_17175742_17177796_17177887_17180926_17181041_17183828_17183869_17184864
transcript_103033.nic	chr19	+	2672	17	ISM	ENSG00000099331.14	ENST00000682292.1	7606	40	-52	28331	-52	0	5prime_fragment	FALSE	canonical	3	129	junction_6	18.9677975461043	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCCACCAAGCATCAGC	17071842	True	NA	NA	False	NA	NA	NA	17075724	17184955	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_17075875_17101659_17102558_17145396_17145492_17152643_17152707_17153966_17154067_17154314_17154416_17156908_17157039_17159394_17159485_17162349_17162467_17162987_17163123_17167942_17168065_17172335_17172478_17172758_17172964_17175662_17175742_17180926_17181041_17183828_17183869_17184864
transcript_103044.nic	chr19	+	3122	15	NIC	ENSG00000099331.14	novel	7606	40	NA	NA	-52	-5511	combination_of_known_junctions	FALSE	canonical	3	20	junction_14	39.7666663815568	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGGAAAAACCAGATCCTC	17071842	True	NA	NA	False	AATAAA	-40	NA	17075724	17178491	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_17075875_17101659_17102558_17145396_17145492_17152643_17152707_17153966_17154067_17154314_17154416_17156908_17157039_17159394_17159485_17162349_17162467_17162987_17163123_17167942_17168065_17172335_17172478_17172758_17172964_17175662_17175742_17177796
transcript_103056.nic	chr19	+	1580	8	ISM	ENSG00000099331.14	ENST00000682292.1	7606	40	-52	53849	-52	-24565	5prime_fragment	FALSE	canonical	3	129	junction_6	11.4749060731561	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTGACCGTCAACGACAAG	17071842	True	NA	NA	False	AAGAAA	-3	NA	17075724	17159437	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_17075875_17101659_17102558_17145396_17145492_17152643_17152707_17153966_17154067_17154314_17154416_17156908_17157039_17159394
transcript_103064.nic	chr19	+	1863	3	NIC	ENSG00000099331.14	novel	7606	40	NA	NA	-52	282	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	68.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTCACAGTTAATACACAT	17071842	True	NA	NA	False	NA	NA	NA	17075724	17104071	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_17075875_17101659_17102558_17103256
transcript_103066.nic	chr19	+	3137	3	NIC	ENSG00000099331.14	novel	7606	40	NA	NA	-52	1556	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	68.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCAGGTGTGGTGGTGT	17071842	True	NA	NA	False	NA	NA	NA	17075724	17105345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_17075875_17101659_17102558_17103256
transcript_103067.nic	chr19	+	1241	2	ISM	ENSG00000099331.14	ENST00000682292.1	7606	40	-52	110536	-52	-1039	5prime_fragment	FALSE	canonical	3	153	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTAGCCAGGCAGGCATA	17071842	True	NA	NA	False	NA	NA	NA	17075724	17102750	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_17075875_17101659
transcript_103068.nic	chr19	+	1418	2	ISM	ENSG00000099331.14	ENST00000682292.1	7606	40	-52	110359	-52	-862	5prime_fragment	FALSE	canonical	3	153	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCAGGCTGGGTGTGGTGG	17071842	True	NA	NA	False	AAAAAG	-8	NA	17075724	17102927	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_17075875_17101659
transcript_103070.known	chr19	+	2087	6	FSM	ENSG00000099331.14	ENST00000597073.5	2087	6	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_5	27.4663430401646	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGTGCATGGGACGCC	17206762	False	NA	5	True	AATAAA	-12	NA	17206773	17213284	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17206785_17207112_17207245_17209585_17209710_17210332_17210381_17210714_17210853_17211650
transcript_103071.known	chr19	+	461	5	FSM	ENSG00000099331.14	ENST00000594971.5	461	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	73.1313031471476	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCATGACTCTGCACGAC	NA	False	NA	NA	False	NA	NA	NA	17172374	17184898	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17172478_17172758_17172964_17175662_17175742_17183828_17183869_17184864
transcript_103072.known	chr19	+	845	8	FSM	ENSG00000053501.14	ENST00000263897.10	845	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	37.4754341304448	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCTTCCGTCTGTCC	17214498	True	NA	9	True	AATAAA	-16	NA	17215356	17219829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17215508_17215801_17215852_17215991_17216071_17216168_17216322_17217452_17217463_17218363_17218392_17219212_17219388_17219630
transcript_103073.known	chr19	+	587	7	FSM	ENSG00000053501.14	ENST00000593597.1	587	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	40.3956130731489	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCACTGAAAATGGCGGAC	17215138	True	NA	NA	False	NA	NA	NA	17215719	17219640	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17215852_17215991_17216071_17216168_17216322_17217452_17217463_17218363_17218392_17219212_17219388_17219630
transcript_103074.known	chr19	+	637	7	FSM	ENSG00000053501.14	ENST00000596136.5	637	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	46.4928309885872	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCTTCCGTCTGTCC	17214531	True	NA	9	True	AATAAA	-16	NA	17215389	17219829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17215508_17215801_17215852_17215991_17216071_17216168_17216322_17217452_17217463_17218363_17218392_17219630
transcript_103075.known	chr19	+	795	7	NNC	ENSG00000053501.14	novel	845	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	39.5881576007551	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCTTCCGTCTGTCC	17214539	True	NA	9	True	AATAAA	-16	NA	17215397	17219829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_17215508_17215801_17215852_17215991_17216071_17216168_17216323_17218363_17218392_17219212_17219388_17219630
transcript_103078.known	chr19	+	1776	5	FSM	ENSG00000053501.14	ENST00000595101.5	1776	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	26.8001865665148	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	17214529	True	NA	NA	False	NA	NA	NA	17215387	17218826	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17215508_17215801_17215852_17215991_17216071_17216168_17216322_17217452
transcript_103081.known	chr19	+	559	4	FSM	ENSG00000053501.14	ENST00000601662.5	559	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	42.9185274677499	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGCCCCGAGAGGAAACA	17214487	True	NA	NA	False	NA	NA	NA	17215345	17217617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17215508_17215991_17216071_17216168_17216322_17217452
transcript_103085.known	chr19	+	1111	6	FSM	ENSG00000099330.9	ENST00000215061.9	1111	6	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	39.5848455851479	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGTATAATTACTTAACA	17224459	True	NA	18	True	AATAAA	-18	NA	17226225	17229219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17226317_17226692_17226870_17226993_17227200_17227839_17228006_17228255_17228310_17228802
transcript_103086.known	chr19	+	878	6	FSM	ENSG00000099330.9	ENST00000600232.5	878	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_5	60.081944043115	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGTATAATTACTTAACA	17224486	False	NA	18	True	AATAAA	-18	NA	17226252	17229219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17226317_17226692_17226870_17226993_17227200_17227839_17228006_17228255_17228310_17229008
transcript_103088.nic	chr19	+	1157	6	NIC	ENSG00000099330.9	novel	1111	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	25	junction_1	64.6362127603405	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACTGAGTATAATTACTT	17224446	True	NA	14	True	AATAAA	-14	NA	17226212	17229215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_17226354_17226692_17226870_17226993_17227200_17227839_17228006_17228255_17228310_17228802
transcript_103091.known	chr19	+	942	5	FSM	ENSG00000099330.9	ENST00000601529.5	942	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	50.9429828337525	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACTGAGTATAATTACTT	17224458	True	NA	14	True	AATAAA	-14	NA	17226224	17229215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17226317_17226692_17226870_17226993_17227200_17228255_17228310_17228802
transcript_103092.known	chr19	+	1201	5	FSM	ENSG00000099330.9	ENST00000594283.5	1201	5	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	37.9275625370258	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTATTAGACACCTACTG	17224476	True	NA	1	True	AATAAA	-1	NA	17226242	17229202	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17226317_17226692_17227200_17227839_17228006_17228255_17228310_17228802
transcript_103105.known	chr19	+	421	3	FSM	ENSG00000099330.9	ENST00000599286.1	421	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	13.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGAGTATAATTACTTAAC	17226100	False	NA	17	True	AATAAA	-17	NA	17227042	17229218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17227200_17228255_17228310_17229008
transcript_103106.known	chr19	+	730	2	FSM	ENSG00000099330.9	ENST00000595769.1	730	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGGATGCATGGGGATGC	17226215	False	NA	NA	False	NA	NA	NA	17227157	17228943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17227200_17228255
transcript_103107.known	chr19	+	1044	5	FSM	ENSG00000099330.9	ENST00000597836.5	1044	5	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	35.6966384972031	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGTAGGGCCTGCTCTC	17225672	True	NA	-36	True	NA	NA	NA	17226614	17229165	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17226870_17226993_17227200_17227839_17228006_17228255_17228310_17228802
transcript_103111.known	chr19	-	2402	14	FSM	ENSG00000130307.12	ENST00000324554.9	2402	14	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_7	14.4107126490418	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCATGTCATGTTGCATG	-17263824	True	NA	-5	True	CATAAA	-14	NA	17264728	17250158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_17250415_17251581_17251705_17251910_17252018_17255384_17255607_17256470_17256721_17258211_17258386_17258583_17258702_17259288_17259430_17259595_17259733_17259896_17260023_17262551_17262991_17264001_17264151_17264245_17264348_17264670
transcript_103116.known	chr19	-	3289	13	FSM	ENSG00000130307.12	ENST00000252597.8	3289	13	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_9	8.1967981553775	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGGAGACTGAAGCTGGA	-17263841	True	NA	-12	True	AATAAA	-28	NA	17264745	17249170	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_17250415_17251581_17251705_17251910_17252018_17255384_17255607_17256470_17256721_17258211_17258386_17259288_17259430_17259595_17259733_17259896_17260023_17262551_17262991_17264001_17264151_17264245_17264348_17264670
transcript_103126.known	chr19	-	2136	12	FSM	ENSG00000130307.12	ENST00000431146.6	2136	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	15.2342589129928	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCATGTTGCATGATTTG	-17263820	True	NA	0	True	CATAAA	-19	NA	17264724	17250153	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_17250415_17251581_17251705_17251910_17252018_17255384_17255607_17256470_17256721_17258211_17258386_17259288_17259430_17259595_17259733_17259896_17260023_17262551_17262991_17264245_17264348_17264670
transcript_10313.known	chr1	-	5658	13	FSM	ENSG00000118454.13	ENST00000370944.9	5658	13	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	17.0749979664876	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCTGGTTCAGCATATTA	-70349696	True	NA	NA	False	AATAAA	-20	NA	70354722	70258998	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_70262848_70270855_70270957_70274719_70274819_70276764_70276845_70292387_70292550_70296129_70296262_70300763_70300909_70306223_70306291_70313744_70313791_70315480_70315567_70324852_70324958_70336057_70336100_70353978
transcript_103134.known	chr19	+	1366	9	FSM	ENSG00000105393.16	ENST00000601043.5	1366	9	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	356.554256039666	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAAGTCCACGCCAATCAC	17250566	True	NA	16	True	AATAAA	-18	NA	17267442	17279337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17267517_17268793_17269092_17271596_17271656_17273903_17274025_17274106_17274186_17275800_17275826_17276494_17276625_17276822_17276910_17278844
transcript_103138.known	chr19	+	1472	9	FSM	ENSG00000105393.16	ENST00000359435.8	1472	9	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_1	283.316491533762	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAAGTCCACGCCAATCAC	17250509	True	NA	16	True	AATAAA	-18	NA	17267385	17279337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17267528_17268755_17269092_17271596_17271656_17273903_17274025_17274106_17274186_17275800_17275826_17276494_17276625_17276822_17276910_17278844
transcript_103141.known	chr19	+	3081	9	FSM	ENSG00000160117.16	ENST00000651416.1	3081	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	24.2638491381726	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTATGAACTCGCCCTGGA	NA	False	NA	13	True	AATAAA	-16	NA	17281698	17287646	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17281983_17282061_17282210_17282655_17282762_17282863_17283003_17283224_17283885_17284088_17284267_17285430_17285591_17285680_17285820_17286379
transcript_103142.known	chr19	+	2962	9	FSM	ENSG00000160117.16	ENST00000404085.7	2962	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	15.7856738848869	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTATGAACTCGCCCTGGA	17281554	True	NA	13	True	AATAAA	-16	NA	17281900	17287646	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17281983_17282056_17282210_17282655_17282762_17282863_17283003_17283224_17283963_17284088_17284267_17285430_17285591_17285680_17285820_17286379
transcript_103158.known	chr19	+	2003	8	FSM	ENSG00000160117.16	ENST00000598347.2	2003	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	24.288235163283	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTACTGGGCTGCATTC	17281572	True	NA	NA	False	NA	NA	NA	17281918	17286922	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17281983_17282056_17282210_17282655_17282762_17282863_17283003_17283224_17283885_17284088_17284267_17285430_17285591_17286379
transcript_103159.known	chr19	+	1821	8	FSM	ENSG00000160117.16	ENST00000404261.9	1821	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	24.070474758551	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCGAGCGACAGCTTCAT	NA	False	NA	NA	False	NA	NA	NA	17281644	17286505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17281983_17282056_17282210_17282655_17282762_17282863_17283003_17283224_17283885_17285430_17285591_17285680_17285820_17286379
transcript_103176.known	chr19	+	930	6	FSM	ENSG00000105393.16	ENST00000447614.6	930	6	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_3	436.179596038146	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATCCCTGTACATCTGCA	17250499	True	NA	NA	False	NA	NA	NA	17267375	17279048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17267528_17268793_17269092_17271596_17271656_17276494_17276625_17276822_17276910_17278844
transcript_103177.known	chr19	+	966	6	FSM	ENSG00000105393.16	ENST00000595632.5	966	6	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_3	502.385350104877	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGGTCCTAGGAGGGAAAC	17250625	True	NA	NA	False	NA	NA	NA	17267501	17279172	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17267528_17268755_17269092_17271596_17271656_17276494_17276625_17276822_17276910_17278844
transcript_103189.nnic	chr19	-	1940	5	NNC	ENSG00000160113.6	novel	2383	4	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	390.448059926029	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCCTGGTCTTTATTTT	-17242592	True	NA	-5	True	AATAAA	-20	NA	17245938	17231882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_17232627_17235498_17236066_17240670_17240766_17244942_17245295_17245756
transcript_1032.known	chr1	+	2330	16	FSM	ENSG00000197785.14	ENST00000536055.6	2330	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	138.973698550801	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCCTGTCTGTCTCTTGG	1512519	False	NA	28	True	AATAAA	-18	NA	1512529	1534685	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1512691_1516011_1516089_1517310_1517413_1517715_1517776_1518920_1518991_1520140_1520307_1520547_1520618_1522743_1522900_1523510_1523568_1523838_1523965_1524272_1524398_1525239_1525292_1526460_1526532_1527694_1527863_1529222_1529332_1533925
transcript_103201.known	chr19	-	2383	4	FSM	ENSG00000160113.6	ENST00000291442.4	2383	4	0	0	0	0	multi-exon	FALSE	canonical	3	546	junction_3	252.021604012213	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCCTGGTCTTTATTTT	-17242573	True	NA	-5	True	AATAAA	-20	NA	17245919	17231882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_17232627_17235498_17236066_17240670_17240766_17244942
transcript_103204.known	chr19	+	502	6	FSM	ENSG00000130311.11	ENST00000596582.1	502	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	205.413339391579	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAGTGAGAAGGGCCCCC	17300763	True	NA	90	True	NA	NA	NA	17309568	17320367	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17309658_17314022_17314104_17314337_17314390_17315933_17315996_17319545_17319726_17320329
transcript_103205.nnic	chr19	+	1262	6	NNC	ENSG00000130311.11	novel	502	6	NA	NA	22	-77	intron_retention	FALSE	canonical	2	9	junction_1	251.710945332141	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGACCTCGCGTCTTTGCT	17300734	True	NA	13	True	AATAAA	-14	NA	17309539	17320290	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_17309658_17312114_17312319_17314022_17314104_17314337_17314390_17315933_17315996_17319545
transcript_103208.known	chr19	+	4043	5	FSM	ENSG00000130311.11	ENST00000359866.9	4043	5	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_1	19.1229574072631	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATCGCCTGTTCTGTGTGT	17300757	True	NA	5	True	AATAAA	-16	NA	17309562	17323298	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17309658_17314022_17314104_17314337_17314390_17315933_17315996_17319545
transcript_103211.nnic	chr19	+	2492	5	Antisense	novelGene_ENSG00000074855.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_3	5.1234753829798	32	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACGTCTGAGGAATGGTAA	NA	False	NA	26	True	AATAAA	-18	NA	17328120	17332436	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr19_+_17330007_17330926_17330992_17331114_17331432_17331524_17331584_17332271
transcript_103215.known	chr19	-	2042	5	FSM	ENSG00000127220.6	ENST00000247706.4	2042	5	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	18.1727818453862	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCCGGACCTGTGCTGGG	-17302010	True	NA	-2	True	AATAAA	-18	NA	17303425	17292130	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_17292832_17294287_17294505_17294674_17294846_17300855_17301625_17303241
transcript_103218.nnic	chr19	+	2436	4	Antisense	novelGene_ENSG00000074855.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_2	5.43650214343336	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTCTGAGGAATGGTAAAAA	NA	False	NA	29	True	AATAAA	-21	NA	17328120	17332439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr19_+_17330007_17330926_17330992_17331114_17331432_17332271
transcript_103223.nnic	chr19	+	2559	3	Antisense	novelGene_ENSG00000074855.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	22	junction_1	2	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTCTGAGGAATGGTAAAAA	NA	False	NA	29	True	AATAAA	-21	NA	17328120	17332439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr19_+_17330007_17330926_17331432_17332271
transcript_103228.known	chr19	+	764	2	FSM	ENSG00000130312.7	ENST00000252602.2	764	2	0	0	0	0	multi-exon	FALSE	canonical	3	917	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATATGTGTCATAACTCT	17295998	True	NA	24	True	AATAAA	-20	NA	17305871	17306843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17305958_17306165
transcript_103236.known	chr19	+	1894	9	FSM	ENSG00000130299.17	ENST00000361619.9	1894	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	94.8946784598589	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTCGTAGTTTTTTAT	17334837	False	NA	10	True	NA	NA	NA	17334919	17341968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17335123_17338007_17338256_17338364_17338452_17338538_17338742_17338953_17339027_17339122_17339267_17339433_17339600_17341043_17341323_17341477
transcript_103254.known	chr19	+	2566	9	FSM	ENSG00000130299.17	ENST00000324894.13	2566	9	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_1	35.7351367704113	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATTGTCATTTCTTTTTA	17332025	True	NA	32	True	TATAAA	-23	NA	17337552	17342731	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17337665_17338007_17338256_17338364_17338452_17338538_17338742_17338953_17339027_17339122_17339267_17339433_17339600_17341043_17341323_17341477
transcript_103255.known	chr19	+	2493	9	FSM	ENSG00000130299.17	ENST00000600625.5	2493	9	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_7	77.9870782565933	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTCTACAAATTGTCATT	17332027	True	NA	24	True	TATAAA	-15	NA	17337554	17342723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17337665_17338007_17338256_17338364_17338452_17338538_17338742_17338953_17339027_17339122_17339267_17339433_17339600_17341106_17341323_17341477
transcript_103263.nic	chr19	+	2689	9	NIC	ENSG00000130299.17	novel	2566	9	NA	NA	-14	0	intron_retention	FALSE	canonical	3	11	junction_1	91.7929054992814	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATTGTCATTTCTTTTTA	17332011	True	NA	32	True	TATAAA	-23	NA	17337538	17342731	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_17337665_17337898_17338256_17338364_17338452_17338538_17338742_17338953_17339027_17339122_17339267_17339433_17339600_17341043_17341323_17341477
transcript_103276.known	chr19	+	1951	8	FSM	ENSG00000130299.17	ENST00000358792.11	1951	8	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_1	38.149009669656	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGGTGATCTAGAAGTGT	17332027	True	NA	64	True	NA	NA	NA	17337554	17342022	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17337665_17338007_17338256_17338364_17338452_17338538_17338742_17338953_17339267_17339433_17339600_17341043_17341323_17341477
transcript_10328.known	chr1	-	3327	12	FSM	ENSG00000118454.13	ENST00000262346.6	3327	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_10	57.5627577030511	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTTCCATACTGATACAT	-70349708	True	NA	-16	True	AATAAA	-15	NA	70354734	70261236	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_70262848_70270855_70270957_70274719_70274819_70276764_70276845_70292387_70292550_70296129_70296262_70300763_70300909_70306223_70306291_70313744_70313791_70315480_70315567_70336057_70336100_70353978
transcript_103318.known	chr19	-	1001	5	FSM	ENSG00000130303.14	ENST00000252593.7	1001	5	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_2	35.3624094201738	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCGAGTTCCTGGAGTAT	-17398825	True	NA	-6	True	AATAAA	-29	NA	17405630	17402938	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_17403327_17403679_17403825_17404128_17404190_17404370_17404438_17405290
transcript_103319.known	chr19	-	879	4	FSM	ENSG00000130303.14	ENST00000527220.2	879	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	211.472614460281	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCGAGTTCCTGGAGTAT	-17398770	True	NA	-6	True	AATAAA	-29	NA	17405575	17402938	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_17403327_17403679_17403825_17404128_17404190_17405290
transcript_103323.known	chr19	+	563	5	FSM	ENSG00000282851.2	ENST00000634577.1	563	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.74165738677394	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCTTAACCCACTGCAGA	17405705	True	NA	NA	False	NA	NA	NA	17405823	17414468	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17405996_17406076_17406297_17413096_17413105_17413220_17413306_17414390
transcript_103324.known	chr19	+	1269	4	FSM	ENSG00000282851.2	ENST00000635435.2	1269	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	3.39934634239519	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAAAACCCTGCCTGTAC	17405644	True	NA	NA	False	NA	NA	NA	17405762	17415005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17405988_17406076_17406297_17413096_17413306_17414390
transcript_103325.known	chr19	+	1250	9	FSM	ENSG00000141971.13	ENST00000317040.12	1250	9	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_3	39.3215907613108	249	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGAGTCCTGATCCTGC	17415043	True	NA	11	True	AATAAA	-19	NA	17420046	17425332	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17420226_17420312_17420412_17420537_17420635_17422331_17422459_17423497_17423618_17423692_17423800_17424005_17424068_17424620_17424678_17424930
transcript_103326.known	chr19	-	2031	3	FSM	ENSG00000188051.7	ENST00000341130.6	2031	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTGTTACTCAATGTT	-17448625	True	NA	-2	True	AGTAAA	-16	NA	17448668	17435508	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_17436928_17445198_17445285_17448142
transcript_103328.known	chr19	+	3514	12	FSM	ENSG00000130304.17	ENST00000252595.12	3514	12	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_10	5.85076105807421	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCCTGCTGGGAGCCCA	17470022	True	NA	22	True	AATAAA	-14	NA	17470523	17506168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17470708_17486562_17486958_17487173_17487336_17487459_17487530_17488847_17488940_17489007_17489118_17497254_17497465_17500277_17500405_17500494_17500633_17500711_17500877_17501272_17501420_17504454
transcript_103332.nnic	chr19	+	3245	11	NIC	ENSG00000130304.17	novel	3514	12	NA	NA	-91	0	combination_of_known_splicesites	TRUE	canonical	2	5	junction_1	8.98276126811795	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCCTGCTGGGAGCCCA	17470385	False	NA	22	True	AATAAA	-14	NA	17470397	17506168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_17470708_17487173_17487336_17487459_17487530_17488847_17488940_17489007_17489118_17497254_17497465_17500277_17500405_17500494_17500633_17500711_17500877_17501272_17501420_17504454
transcript_103346.known	chr19	+	880	6	FSM	ENSG00000130313.7	ENST00000594761.5	880	6	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_2	187.225639269839	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGACCGTGCCCTTCGAG	17501926	True	NA	NA	False	NA	NA	NA	17511635	17521043	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17511961_17516172_17516281_17516370_17516475_17517287_17517390_17517709_17517851_17520943
transcript_103349.known	chr19	+	1008	5	FSM	ENSG00000130313.7	ENST00000252603.7	1008	5	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_2	22.8076193409132	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCACTGTCTCGCGGTG	17501939	True	NA	9	True	ATTAAA	-17	NA	17511648	17521288	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17511961_17516172_17516281_17517287_17517390_17517709_17517851_17520943
transcript_103352.known	chr19	+	651	4	FSM	ENSG00000130313.7	ENST00000595782.1	651	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	168.77071889269	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCACTGTCTCGCGGTG	17502155	False	NA	9	True	ATTAAA	-17	NA	17511864	17521288	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17511961_17516172_17516281_17517287_17517390_17520943
transcript_103353.known	chr19	-	313	2	FSM	ENSG00000269439.7	ENST00000595116.2	359	2	46	0	7	0	multi-exon	FALSE	canonical	3	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGCTCATTCATTTGCA	-17511341	True	NA	NA	False	AATAAA	-35	NA	17511468	17503435	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_17503623_17511342
transcript_103354.known	chr19	+	4343	6	FSM	ENSG00000130304.17	ENST00000594962.5	4343	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	13.5793961574144	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCCTGCTGGGAGCCCA	NA	False	NA	22	True	AATAAA	-14	NA	17495414	17506168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17497465_17500277_17500405_17500494_17500633_17500711_17500887_17501280_17501420_17504454
transcript_103357.known	chr19	+	3647	12	FSM	ENSG00000130309.12	ENST00000252599.9	3647	12	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_4	21.2785539805724	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGTTTGTGGGATTTTG	17551614	True	NA	32	True	AATAAA	-20	NA	17555648	17583157	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17555974_17559310_17559422_17560347_17560466_17567405_17567541_17568508_17568714_17572482_17572603_17577194_17577272_17577360_17577468_17577956_17578090_17579481_17579610_17580698_17580906_17581176
transcript_103360.nic	chr19	+	2747	6	ISM	ENSG00000130309.12	ENST00000690106.1	3687	13	21367	-13	6	0	3prime_fragment	FALSE	canonical	3	214	junction_1	23.465719677862	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGTTTGTGGGATTTTG	17576847	True	NA	32	True	AATAAA	-20	NA	17577080	17583157	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_17577272_17577360_17577468_17577956_17578090_17579481_17579610_17580698_17580906_17581176
transcript_103363.known	chr19	+	2941	2	FSM	ENSG00000130309.12	ENST00000593832.1	2941	2	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGGGATTTTGCTCGG	17579939	False	NA	37	True	AATAAA	-25	NA	17579950	17583162	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17580906_17581176
transcript_103377.known	chr19	-	9985	44	FSM	ENSG00000130477.16	ENST00000519716.7	9985	44	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	19.1272813921875	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGACACGTGGTTGCC	-17684798	True	NA	-12	True	ATTAAA	-20	NA	17688354	17601335	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_17606355_17609939_17610100_17611762_17611856_17617701_17617850_17618420_17618502_17618905_17618963_17620692_17620723_17621831_17621871_17623541_17623548_17624828_17624953_17626632_17626786_17627508_17627598_17627862_17627941_17629239_17629324_17630144_17630289_17630653_17630751_17632781_17632909_17633107_17633194_17636023_17636158_17639082_17639218_17639435_17639526_17639839_17639909_17640510_17640662_17641392_17641557_17642844_17642961_17645673_17645844_17645969_17646112_17647264_17647493_17648430_17648651_17648911_17648984_17649338_17649345_17649508_17649588_17652630_17652678_17655273_17655383_17655882_17656399_17658061_17658270_17663531_17663568_17666649_17666705_17668116_17668191_17669552_17669677_17672377_17672496_17674656_17674757_17676011_17676042_17688177
transcript_103388.known	chr19	+	3288	7	FSM	ENSG00000130479.11	ENST00000324096.9	3288	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	232.514814342848	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGCCTCTCTTCTTTC	17708509	True	NA	21	True	AATAAA	-16	NA	17719479	17734513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17719621_17720935_17721038_17724125_17724209_17725048_17725190_17725828_17728173_17733192_17733429_17734272
transcript_103399.known	chr19	+	598	5	FSM	ENSG00000130479.11	ENST00000601544.5	598	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	265.01556558059	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGCTCCGGCTCCAGCTGC	17708513	True	NA	NA	False	NA	NA	NA	17719483	17725944	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17719621_17720935_17721038_17724125_17724209_17725029_17725190_17725828
transcript_103404.known	chr19	+	3214	29	FSM	ENSG00000130475.15	ENST00000594202.5	3214	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	59.4101533959525	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTCCTGCTCCAGGAAG	17746521	True	NA	9	True	AATAAA	-33	NA	17747717	17788557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17747815_17754316_17754362_17754591_17754686_17755121_17755192_17762761_17762854_17764374_17764450_17766668_17766811_17770424_17770578_17770791_17770897_17772456_17772556_17772644_17772742_17774238_17774284_17774393_17774479_17775055_17775081_17775455_17775514_17775982_17776162_17776246_17776272_17776634_17776687_17778136_17778229_17778608_17778885_17781230_17781344_17781451_17781540_17781711_17781821_17783016_17783173_17784102_17784236_17784724_17784925_17786573_17786630_17787681_17787847_17788269
transcript_103409.nic	chr19	+	3322	29	NIC	ENSG00000130475.15	novel	3214	29	NA	NA	-45	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_12	62.6807895415415	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTCCTGCTCCAGGAAG	NA	False	NA	9	True	AATAAA	-33	NA	17747672	17788557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_17747815_17754316_17754362_17754591_17754759_17755117_17755192_17762761_17762854_17764374_17764450_17766668_17766811_17770424_17770578_17770791_17770897_17772456_17772556_17772644_17772742_17774238_17774284_17774393_17774479_17775055_17775081_17775455_17775514_17775982_17776162_17776246_17776272_17776634_17776687_17778136_17778229_17778608_17778885_17781230_17781344_17781451_17781540_17781711_17781821_17783016_17783173_17784102_17784236_17784724_17784925_17786573_17786630_17787681_17787847_17788283
transcript_103410.nic	chr19	+	3350	29	NIC	ENSG00000130475.15	novel	3214	29	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	64.0953829245516	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTCCTGCTCCAGGAAG	NA	False	NA	9	True	AATAAA	-33	NA	17747672	17788557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_17747815_17754316_17754467_17754591_17754682_17755117_17755192_17762761_17762854_17764374_17764450_17766668_17766811_17770424_17770578_17770791_17770897_17772456_17772556_17772644_17772742_17774238_17774284_17774393_17774479_17775055_17775081_17775455_17775514_17775982_17776162_17776246_17776272_17776634_17776687_17778136_17778229_17778608_17778885_17781230_17781344_17781451_17781540_17781711_17781821_17783016_17783173_17784102_17784236_17784724_17784925_17786573_17786630_17787681_17787847_17788283
transcript_103414.nnic	chr19	+	2969	28	NIC	ENSG00000130475.15	novel	3094	28	NA	NA	-45	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	63.3615488372581	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTCCTGCTCCAGGAAG	NA	False	NA	9	True	AATAAA	-33	NA	17747672	17788557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_17747815_17754316_17754362_17754591_17754682_17755117_17755192_17762761_17762854_17764374_17764450_17766668_17766811_17770424_17770578_17770791_17770897_17772456_17772556_17772644_17772742_17774238_17774284_17774393_17774479_17775055_17775081_17775455_17775514_17775982_17776162_17776246_17776272_17776634_17776687_17778136_17778229_17781230_17781344_17781451_17781540_17781711_17781821_17783016_17783173_17784102_17784236_17784724_17784925_17786573_17786630_17787681_17787847_17788283
transcript_103418.known	chr19	+	3094	28	FSM	ENSG00000130475.15	ENST00000600676.5	3094	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	63.271141220824	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGGAAGTATCCTTTGCG	17746548	True	NA	20	True	AATAAA	-44	NA	17747744	17788568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17747815_17754316_17754362_17755117_17755192_17762761_17762854_17764374_17764450_17766668_17766811_17770424_17770578_17770791_17770897_17772456_17772556_17772644_17772742_17774238_17774284_17774393_17774479_17775055_17775081_17775455_17775514_17775982_17776162_17776246_17776272_17776634_17776687_17778136_17778229_17778608_17778885_17781230_17781344_17781451_17781540_17781711_17781821_17783016_17783173_17784102_17784236_17784724_17784925_17786573_17786630_17787681_17787847_17788283
transcript_10342.nic	chr1	-	2233	7	NIC	ENSG00000118454.13	novel	530	4	NA	NA	-40	819	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	69.0957467737503	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGTAGAAAAGGATTTTT	NA	False	NA	NA	False	AATACA	-18	NA	70354774	70304866	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_70305958_70306223_70306291_70313744_70313791_70315480_70315567_70324852_70324958_70336057_70336100_70353978
transcript_103425.nic	chr19	+	3081	27	NIC	ENSG00000130475.15	novel	3094	28	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	63.5750965347933	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTCCTGCTCCAGGAAG	NA	False	NA	9	True	AATAAA	-33	NA	17747672	17788557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_17747815_17754316_17754362_17762761_17762854_17764374_17764450_17766668_17766811_17770424_17770578_17770791_17770897_17772456_17772556_17772644_17772742_17774238_17774284_17774393_17774479_17775055_17775081_17775455_17775514_17775982_17776162_17776246_17776272_17776634_17776687_17778136_17778229_17778608_17778885_17781230_17781344_17781451_17781540_17781711_17781821_17783016_17783173_17784102_17784236_17784724_17784925_17786573_17786630_17787681_17787847_17788283
transcript_103432.nic	chr19	+	3020	26	NIC	ENSG00000130475.15	novel	3118	27	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	64.6274987911493	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTCCTGCTCCAGGAAG	17746492	True	NA	9	True	AATAAA	-33	NA	17747688	17788557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_17747815_17762761_17762854_17764374_17764450_17766668_17766811_17770424_17770578_17770791_17770897_17772456_17772556_17772644_17772742_17774238_17774284_17774393_17774479_17775055_17775081_17775455_17775514_17775982_17776162_17776246_17776272_17776634_17776687_17778136_17778229_17778608_17778885_17781230_17781344_17781451_17781540_17781711_17781821_17783016_17783173_17784102_17784236_17784724_17784925_17786573_17786630_17787681_17787847_17788283
transcript_103439.nic	chr19	+	1784	10	ISM	ENSG00000130475.15	ENST00000597512.1	2934	25	15692	-19	-46	0	3prime_fragment	FALSE	canonical	3	158	junction_5	11.8081369726741	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTCCTGCTCCAGGAAG	NA	False	NA	9	True	AATAAA	-33	NA	17778394	17788557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_17778885_17781230_17781344_17781451_17781540_17781711_17781821_17783016_17783173_17784102_17784236_17784724_17784925_17786573_17786630_17787681_17787847_17788283
transcript_103447.known	chr19	+	856	3	FSM	ENSG00000179913.11	ENST00000599265.5	856	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACTATGTGCCAGAGGT	17794816	False	NA	NA	False	NA	NA	NA	17794827	17811753	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17794884_17807757_17808375_17811570
transcript_103450.known	chr19	+	2692	3	FSM	ENSG00000179913.11	ENST00000318683.7	2692	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCCACAGACAGATTCTT	17794990	True	NA	NA	False	NA	NA	NA	17795137	17813576	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17795207_17807757_17808375_17811570
transcript_103455.nic	chr19	-	2543	3	ISM	ENSG00000105639.20	ENST00000527670.5	3996	23	13642	-1370	11720	0	3prime_fragment	FALSE	canonical	3	16	junction_1	2	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTGTGCTGGACTTGGG	-17830786	True	NA	-1	True	AATAAA	-17	NA	17830805	17824781	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_17826911_17830107_17830219_17830502
transcript_103459.known	chr19	+	634	5	FSM	ENSG00000105640.13	ENST00000222247.10	634	5	0	0	0	0	multi-exon	TRUE	canonical	3	17527	junction_1	2235.3392779397	7688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGCATGTTTTCTTTGCAC	17852460	True	NA	10	True	AATAAA	-22	NA	17859909	17863319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17859975_17861292_17861473_17862093_17862224_17862917_17863028_17863170
transcript_10346.nic	chr1	-	2451	5	ISM	ENSG00000118454.13	ENST00000370944.9	5658	13	-52	53370	-40	-6683	5prime_fragment	FALSE	canonical	3	183	junction_1	6.59545297913646	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGTAATAGAAATTTCACAG	NA	False	NA	NA	False	NA	NA	NA	70354774	70312368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_70313791_70315480_70315567_70324852_70324958_70336057_70336100_70353978
transcript_103464.known	chr19	+	683	5	FSM	ENSG00000105640.13	ENST00000597648.5	683	5	0	0	0	0	multi-exon	FALSE	canonical	1	781	junction_1	9457.85420629331	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCAACACCTTCTTCTAG	17860042	False	NA	-66	True	NA	NA	NA	17860124	17863243	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17860315_17861292_17861473_17862093_17862224_17862917_17863028_17863170
transcript_10347.nic	chr1	+	874	4	FSM	ENSG00000197568.15	ENST00000689607.1	868	4	-2	-4	-2	0	multi-exon	FALSE	canonical	2	14	junction_2	11.2249721603218	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	70353928	True	NA	17	True	ATTAAA	-22	NA	70354790	70368023	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_70355112_70366443_70366538_70366932_70366985_70367616
transcript_10348.known	chr1	+	832	4	FSM	ENSG00000197568.15	ENST00000463058.6	863	4	31	0	-15	0	multi-exon	FALSE	canonical	2	14	junction_2	6.16441400296898	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	70353966	True	NA	17	True	ATTAAA	-22	NA	70354828	70368023	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_70355108_70366443_70366538_70366932_70366985_70367616
transcript_103480.known	chr19	+	987	5	FSM	ENSG00000007080.11	ENST00000445755.7	987	5	0	0	0	0	multi-exon	FALSE	canonical	3	1129	junction_1	481.378229669768	1345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAAGCCTAAGTGAGTGG	17910295	True	NA	19	True	AATAAA	-27	NA	17933014	17943985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17933049_17936409_17936580_17942655_17942846_17943260_17943376_17943507
transcript_103484.known	chr19	+	1055	5	FSM	ENSG00000007080.11	ENST00000597436.5	1055	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	953.586486638732	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTAAGTGAGTGGGTGGGG	17934965	True	NA	25	True	AATAAA	-33	NA	17935095	17943991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17935192_17936409_17936580_17942655_17942846_17943260_17943376_17943507
transcript_103493.known	chr19	+	3603	12	FSM	ENSG00000105642.16	ENST00000682733.1	3603	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	21.5713308363111	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGGCAGGACTCATCC	17951956	True	NA	17	True	AATAAA	-32	NA	17952257	18000085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17952339_17954560_17954682_17973807_17974291_17975091_17975188_17981708_17982128_17982567_17982577_17985311_17985454_17988414_17988526_17989715_17989844_17993053_17993063_17993489_17993560_17998151
transcript_10350.known	chr1	+	802	3	FSM	ENSG00000197568.15	ENST00000370940.7	815	3	13	0	-1	0	multi-exon	FALSE	canonical	3	41	junction_1	28	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	70353948	True	NA	17	True	ATTAAA	-22	NA	70354810	70368023	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_70355112_70366443_70366538_70367616
transcript_103501.known	chr19	+	3625	11	FSM	ENSG00000105642.16	ENST00000222249.13	3625	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	20.011246837716	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTCTTTGGCAGGACT	17951111	True	NA	12	True	AATAAA	-27	NA	17951292	18000080	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17951410_17954560_17954682_17973807_17974291_17975091_17975188_17981708_17982128_17985311_17985454_17988414_17988526_17989715_17989844_17993053_17993063_17993489_17993560_17998151
transcript_10351.known	chr1	+	898	3	FSM	ENSG00000197568.15	ENST00000359875.9	898	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	42	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	70353949	True	NA	17	True	ATTAAA	-22	NA	70354811	70368023	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_70355209_70366443_70366538_70367616
transcript_103510.nic	chr19	+	2437	11	NIC	ENSG00000105642.16	novel	3603	12	NA	NA	-148	-1373	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	19.4987179065702	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTGCCTGTGTGCATGG	17951855	False	NA	15	True	AATAAA	-15	NA	17952036	17998707	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_17952339_17954560_17954682_17973807_17974291_17975091_17975188_17981708_17982128_17985311_17985454_17988414_17988526_17989715_17989844_17993053_17993063_17993489_17993560_17998151
transcript_103513.nic	chr19	+	2258	10	NIC	ENSG00000105642.16	novel	3625	11	NA	NA	-40	-1373	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	15.1860885006843	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTGCCTGTGTGCATGG	17951211	False	NA	15	True	AATAAA	-15	NA	17951252	17998707	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_17951410_17954560_17954682_17973807_17974291_17975091_17975188_17981708_17982128_17985311_17985454_17988414_17988526_17989715_17989819_17993489_17993560_17998151
transcript_103518.known	chr19	+	3579	10	FSM	ENSG00000105642.16	ENST00000615435.2	3579	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	20.0985227637245	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGGCAGGACTCATCC	17966664	True	NA	17	True	AATAAA	-32	NA	17967130	18000085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17967318_17973807_17974291_17975091_17975188_17981708_17982128_17982567_17982577_17985311_17985454_17988414_17988526_17989715_17989844_17993489_17993560_17998151
transcript_10352.known	chr1	+	692	3	FSM	ENSG00000197568.15	ENST00000361764.9	823	3	19	112	7	-108	multi-exon	FALSE	canonical	3	29	junction_1	34	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCTACCCAAATCCTATAAA	70353942	True	NA	-95	True	NA	NA	NA	70354804	70367911	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_70355108_70366443_70366538_70367616
transcript_103520.known	chr19	+	3603	10	FSM	ENSG00000105642.16	ENST00000684775.1	3603	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	19.8668406654076	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGGCAGGACTCATCC	17966640	True	NA	17	True	AATAAA	-32	NA	17967106	18000085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_17967318_17973807_17974291_17975091_17975188_17981708_17982128_17985311_17985454_17988414_17988526_17989715_17989844_17993053_17993063_17993489_17993560_17998151
transcript_103535.known	chr19	+	2528	8	FSM	ENSG00000105643.11	ENST00000379656.7	2528	8	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_1	7.16567783084826	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGGCTTCTTGGTTTATT	18000976	True	NA	9	True	AGTAAA	-16	NA	18001131	18014102	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18001574_18008710_18008778_18008970_18009119_18009591_18009695_18009782_18010040_18010195_18010359_18010571_18010730_18012912
transcript_103536.known	chr19	+	2262	8	FSM	ENSG00000105643.11	ENST00000595712.6	2262	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	11.7837660727436	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGGAGAAAGAATCCGGG	18007088	True	NA	-5	True	AGTAAA	-2	NA	18007181	18014088	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18007372_18008710_18008778_18008970_18009119_18009591_18009695_18009782_18010040_18010195_18010359_18010571_18010730_18012912
transcript_103537.known	chr19	+	2501	8	FSM	ENSG00000105643.11	ENST00000222250.5	2501	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	11.7837660727436	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGGCTTCTTGGTTTATT	18008071	True	NA	9	True	AGTAAA	-16	NA	18008169	18014102	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18008585_18008710_18008778_18008970_18009119_18009591_18009695_18009782_18010040_18010195_18010359_18010571_18010730_18012912
transcript_103539.known	chr19	+	5896	27	FSM	ENSG00000099308.11	ENST00000262811.10	5896	27	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	5.68359520355469	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCAACGTCTGGATTTGT	18097234	True	NA	11	True	AATAAA	-22	NA	18097792	18151692	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18097832_18107586_18107619_18121684_18121774_18121849_18121923_18122672_18122752_18123216_18123375_18123579_18123656_18123938_18124149_18124264_18124367_18124641_18124775_18128399_18128459_18128865_18128952_18130493_18130703_18131908_18132048_18134578_18134712_18134816_18134983_18135739_18135842_18137238_18137362_18139014_18139125_18141881_18142016_18143762_18144008_18144465_18144694_18145002_18145230_18145742_18145866_18146880_18147018_18147442_18147625_18149190
transcript_10354.known	chr1	+	2090	12	FSM	ENSG00000116761.12	ENST00000370938.8	2090	12	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_7	16.8095801098979	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGAGAATGGCGTGAAACC	70407755	True	NA	NA	False	NA	NA	NA	70411267	70439851	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_70411584_70415955_70416038_70417936_70418033_70421565_70421676_70424284_70424417_70429793_70429852_70430316_70430395_70432082_70432236_70433827_70433950_70435124_70435178_70438687_70438827_70439100
transcript_103555.known	chr19	+	988	7	FSM	ENSG00000216490.4	ENST00000407280.4	988	7	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_5	20.8619803044251	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCTGGATGGTGTAATTA	18171464	True	NA	NA	False	AGTAAA	-16	NA	18173812	18178117	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18173974_18175039_18175223_18175310_18175386_18175604_18175698_18177139_18177293_18177710_18177765_18177848
transcript_103559.known	chr19	+	1578	5	FSM	ENSG00000254858.10	ENST00000599612.3	1578	5	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_3	19.3697573552174	180	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCCCCACCAAAAGAGAAAA	18189130	True	NA	NA	False	NA	NA	NA	18193217	18196948	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18193469_18193863_18194035_18194776_18194854_18194957_18195087_18195998
transcript_103561.known	chr19	-	1496	5	FSM	ENSG00000105649.10	ENST00000222256.9	1496	5	0	0	0	0	multi-exon	TRUE	canonical	3	103	junction_2	7.94905654779232	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCGGGTCCTGCCCACCC	-18202613	True	NA	-8	True	AATAAA	-32	NA	18204042	18196783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18197661_18198724_18198850_18200326_18200446_18202512_18202741_18203895
transcript_103563.known	chr19	-	2542	15	FSM	ENSG00000105650.22	ENST00000447275.7	2542	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	4.91353814911995	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGTGCCAGCTTTCTGCC	-18224445	True	NA	-9	True	NA	NA	NA	18224493	18210542	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18211277_18211758_18211942_18213367_18213491_18216740_18216896_18218148_18218249_18218333_18218499_18218939_18219039_18219233_18219398_18220225_18220320_18220402_18220516_18220873_18220924_18221104_18221179_18221260_18221298_18222131_18222324_18224234
transcript_103574.known	chr19	+	267	2	FSM	ENSG00000268650.3	ENST00000596473.1	267	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCATTCTCCCTGCCCTC	18204661	True	NA	0	True	AATAAA	-12	NA	18204740	18205563	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18204900_18205455
transcript_103577.known	chr19	-	1113	6	FSM	ENSG00000130520.11	ENST00000600289.6	1113	6	0	0	0	0	multi-exon	FALSE	canonical	2	38	junction_2	2220.76379653488	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGCACATCCACTGTTCC	-18273698	True	NA	-18	True	AATAAA	-17	NA	18323060	18306915	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18307556_18309677_18309862_18310109_18310215_18312603_18312703_18316023_18316066_18323017
transcript_103582.known	chr19	-	1704	5	FSM	ENSG00000130520.11	ENST00000593829.6	1704	5	0	0	0	0	multi-exon	FALSE	canonical	3	3870	junction_4	489.804744260404	2175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTTCTTGAGTCTTCA	-18273714	True	NA	-6	True	AATAAA	-20	NA	18323076	18306235	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18307556_18309677_18309862_18312603_18312703_18316023_18316066_18323017
transcript_103585.known	chr19	-	986	4	FSM	ENSG00000130520.11	ENST00000252816.10	986	4	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_3	2212.99179091714	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGTTCCTTTTGAGCT	-18273709	True	NA	-9	True	AATAAA	-26	NA	18323071	18306906	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18307556_18309677_18309862_18312603_18312703_18323017
transcript_103586.known	chr19	-	807	4	FSM	ENSG00000130520.11	ENST00000594828.7	807	4	0	0	0	0	multi-exon	FALSE	canonical	3	3870	junction_3	557.795661510557	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCAGGGGCCATCTGTAG	-18273750	True	NA	NA	False	CATAAA	-14	NA	18323112	18309290	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18309862_18312603_18312703_18316023_18316066_18323017
transcript_10359.known	chr1	+	1196	11	FSM	ENSG00000116761.12	ENST00000346806.2	1196	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	55.6866231693034	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTGCAAAATTTTCAAGC	70407870	False	NA	NA	False	ATTAAA	-16	NA	70411382	70439204	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_70411584_70415955_70416038_70417936_70418033_70421565_70421676_70429793_70429852_70430316_70430395_70432082_70432236_70433827_70433950_70435124_70435178_70438687_70438827_70439100
transcript_103591.known	chr19	+	7081	5	FSM	ENSG00000130517.14	ENST00000269919.11	7081	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	6.60965203320114	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATTTCCTGTGTGTCCTT	18337887	True	NA	16	True	AATAAA	-17	NA	18340597	18369950	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18340716_18342858_18342912_18355894_18356012_18357382_18357616_18363390
transcript_103594.known	chr19	+	545	4	FSM	ENSG00000130517.14	ENST00000597431.2	545	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	6.68331255192114	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGATCTGGAAGAGAGATTC	18337928	True	NA	NA	False	NA	NA	NA	18340638	18363688	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18340716_18342858_18342912_18355894_18356012_18363390
transcript_103597.known	chr19	+	1200	2	FSM	ENSG00000130513.7	ENST00000252809.3	1200	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTGGTGTCCAGGATAA	18385666	True	NA	20	True	AATAAA	-16	NA	18386157	18389176	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18386467_18388285
transcript_103598.known	chr19	-	2427	2	FSM	ENSG00000175489.10	ENST00000339007.4	2427	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTGAGAAAATCTTTCA	NA	False	NA	NA	False	AATAAA	-28	NA	18397622	18391136	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18392126_18396184
transcript_103599.known	chr19	+	1725	18	FSM	ENSG00000130511.16	ENST00000270061.12	1725	18	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_5	79.0131170398932	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTCTCAGATTCCCTCT	18417039	True	NA	26	True	AATAAA	-26	NA	18419397	18434562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18419708_18427350_18427424_18427751_18427814_18427897_18427983_18430840_18430931_18431352_18431419_18431646_18431707_18431792_18431863_18431999_18432071_18432146_18432215_18432558_18432605_18432699_18432736_18432828_18432884_18432972_18433044_18433134_18433214_18433584_18433614_18433709_18433818_18434216
transcript_103606.known	chr19	+	1721	17	FSM	ENSG00000130511.16	ENST00000348495.10	1721	17	0	0	0	0	multi-exon	TRUE	canonical	3	187	junction_5	52.994693130539	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTCTCAGATTCCCTCT	18419320	False	NA	26	True	AATAAA	-26	NA	18419335	18434562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18419708_18427350_18427424_18427751_18427814_18427897_18427983_18430840_18430931_18431646_18431707_18431792_18431863_18431999_18432071_18432146_18432215_18432558_18432605_18432699_18432736_18432828_18432884_18432972_18433044_18433134_18433214_18433584_18433614_18433709_18433818_18434216
transcript_10361.known	chr1	+	2044	11	FSM	ENSG00000116761.12	ENST00000411986.6	2044	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	56.1648466569615	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGAGAATGGCGTGAAACC	70407705	True	NA	NA	False	NA	NA	NA	70411217	70439851	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_70411584_70415955_70416038_70421565_70421676_70424284_70424417_70429793_70429852_70430316_70430395_70432082_70432236_70433827_70433950_70435124_70435178_70438687_70438827_70439100
transcript_103626.known	chr19	-	2252	11	FSM	ENSG00000105655.19	ENST00000338128.13	2252	11	0	0	0	0	multi-exon	FALSE	canonical	3	603	junction_8	144.969651996547	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGTGTGGGGCCTCCCAG	-18425102	True	NA	-18	True	AATAAA	-13	NA	18438133	18434387	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18436480_18436683_18436878_18436972_18437106_18437598_18437761_18437859_18437989_18438092
transcript_10363.known	chr1	-	2333	4	FSM	ENSG00000050628.21	ENST00000306666.10	2360	4	28	-1	0	1	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTTGAGTCATCTAATAG	-71047753	True	NA	NA	False	AATAAA	-25	NA	71047788	70970780	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_70971734_70974296_70974389_71012304_71012485_71046680
transcript_103631.known	chr19	-	1703	10	FSM	ENSG00000105655.19	ENST00000457269.8	1703	10	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_8	264.079299724931	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGGTTCTTGGGGCCTG	-18425136	True	NA	-35	True	AATAAA	-27	NA	18438167	18434808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18436480_18436683_18436878_18436972_18437106_18437859_18437989_18438092
transcript_103633.nic	chr19	-	1978	10	NIC	ENSG00000105655.19	novel	2252	11	NA	NA	-31	0	intron_retention	FALSE	canonical	3	603	junction_7	144.914534199376	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCCTTCCACCTGGGG	-18438187	False	NA	-48	True	AATAAA	-14	NA	18438198	18434821	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18436480_18436683_18437106_18437598_18437761_18437859_18437989_18438092
transcript_103634.known	chr19	-	1654	10	FSM	ENSG00000105655.19	ENST00000582770.6	1654	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	287.915496862071	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCCTTCCACCTGGGGT	-18425131	True	NA	-47	True	AATAAA	-15	NA	18438162	18434820	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18436480_18436972_18437106_18437598_18437761_18437859_18437989_18438092
transcript_103641.known	chr19	-	1466	9	FSM	ENSG00000105655.19	ENST00000577820.5	1466	9	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_7	282.860141014955	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCTTGAAGGCCCCCACA	-18425084	True	NA	-87	True	NA	NA	NA	18438115	18434860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18436480_18436683_18436878_18437859_18437989_18438092
transcript_103648.known	chr19	-	2148	9	FSM	ENSG00000105655.19	ENST00000577916.6	2148	9	0	0	0	0	multi-exon	FALSE	canonical	3	603	junction_6	153.496742636448	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCCTTCCACCTGGGG	-18425133	True	NA	-48	True	AATAAA	-14	NA	18438164	18434821	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18437106_18437598_18437761_18437859_18437989_18438092
transcript_10365.known	chr1	-	2821	11	FSM	ENSG00000132485.14	ENST00000254821.10	2821	11	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_2	202.331015912044	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTGGTGTTTGTTAGAA	-71063466	True	NA	-13	True	AATAAA	-17	NA	71081011	71063336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_71065138_71065677_71065753_71066775_71066935_71069275_71069363_71070826_71070997_71072120_71072256_71072471_71072549_71076794_71076878_71078456_71078566_71078655_71078709_71080939
transcript_103655.nnic	chr19	-	1376	8	NIC	ENSG00000105655.19	novel	2148	9	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	3	102	junction_6	292.282502426146	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCCTTCCACCTGGGG	-18438169	False	NA	-48	True	AATAAA	-14	NA	18438180	18434821	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18436480_18437859_18437989_18438092
transcript_103677.known	chr19	+	793	3	FSM	ENSG00000130511.16	ENST00000599699.2	793	3	0	0	0	0	multi-exon	FALSE	canonical	3	364	junction_2	37.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTCTCAGATTCCCTCT	18433259	True	NA	26	True	AATAAA	-26	NA	18433274	18434562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18433614_18433709_18433818_18434216
transcript_103680.known	chr19	-	3970	12	FSM	ENSG00000105656.13	ENST00000262809.9	3970	12	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_8	13.00349603341	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCAGCCCAGGCTGCCT	-18519901	True	NA	2	True	AATAAA	-16	NA	18522070	18442662	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18444869_18445223_18445269_18446308_18446481_18446747_18446815_18450476_18450976_18451551_18451649_18458204_18458330_18461577_18461853_18465411_18465576_18465796_18465919_18472834_18472883_18521920
transcript_103685.nic	chr19	-	1817	11	ISM	ENSG00000105656.13	ENST00000262809.9	3970	12	-54	2562	-8	-474	5prime_fragment	FALSE	canonical	3	72	junction_7	13.0445390872963	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGAGTGTCTCTTGTGTTG	-18519955	True	NA	NA	False	NA	NA	NA	18522124	18445224	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_18445269_18446308_18446481_18446747_18446815_18450476_18450976_18451551_18451649_18458204_18458330_18461577_18461853_18465411_18465576_18465796_18465919_18472834_18472883_18521920
transcript_10369.known	chr1	-	2816	10	FSM	ENSG00000132485.14	ENST00000370920.8	2816	10	0	0	0	0	multi-exon	TRUE	canonical	3	427	junction_1	180.313923786021	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAATGTTCATTTTTAAAC	-71063490	True	NA	-1	True	AATAAA	-22	NA	71081035	71063290	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_71065138_71066775_71066935_71069275_71069363_71070826_71070997_71072120_71072256_71072471_71072549_71076794_71076878_71078456_71078566_71078655_71078709_71080939
transcript_103695.known	chr19	-	1756	9	FSM	ENSG00000105701.16	ENST00000596558.6	1756	9	0	0	0	0	multi-exon	FALSE	canonical	3	880	junction_8	957.990442280089	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCACGGACTCCTGAGCT	-18542946	False	NA	-9	True	AATAAA	-17	NA	18542972	18531761	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18532256_18532663_18532796_18533269_18533348_18537600_18537774_18538215_18538434_18539370_18539460_18539550_18539721_18541678_18541996_18542887
transcript_103698.nic	chr19	-	1793	9	NIC	ENSG00000105701.16	novel	1781	9	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	1184.99818037835	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCCACGGACTCCTGAGC	-18519127	True	NA	-10	True	AATAAA	-16	NA	18543604	18531762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_18532256_18532663_18532796_18533269_18533348_18537600_18537774_18538215_18538434_18539370_18539460_18539550_18539721_18541678_18541996_18543481
transcript_103702.known	chr19	-	1781	9	FSM	ENSG00000105701.16	ENST00000597960.7	1781	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	1122.13042356938	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGAGCTTTCTTCTCCCG	-18519100	True	NA	2	True	AATAAA	-28	NA	18543577	18531750	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18532256_18532663_18532796_18533269_18533348_18537600_18537774_18538215_18538437_18539370_18539460_18539550_18539721_18541678_18541996_18543481
transcript_103724.known	chr19	-	1292	6	FSM	ENSG00000105701.16	ENST00000544835.7	1292	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1697.83773076228	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGAGCTTTCTTCTCCC	-18519096	True	NA	1	True	AATAAA	-27	NA	18543573	18531751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18532256_18532663_18532796_18533269_18533348_18537600_18537774_18541678_18541996_18543485
transcript_103726.known	chr19	+	1327	6	FSM	ENSG00000105700.11	ENST00000601630.5	1327	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	415.000048192768	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCCGATGTTTACAGATG	18538610	True	NA	-31	True	NA	NA	NA	18557875	18569310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18557915_18562035_18562158_18564868_18565022_18565133_18565191_18567131_18567179_18568401
transcript_103727.known	chr19	+	895	6	FSM	ENSG00000105700.11	ENST00000600654.5	895	6	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_5	349.164946694252	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGTAAAAGTATCAAATACTT	18538626	True	NA	NA	False	NA	NA	NA	18557891	18569091	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18557915_18562035_18562158_18564868_18565022_18567131_18567179_18568401_18568690_18568829
transcript_103732.known	chr19	+	656	6	FSM	ENSG00000105700.11	ENST00000600372.5	656	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	437.150042891454	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGTGACACCAGCCCCG	18538540	True	NA	NA	False	NA	NA	NA	18557805	18568495	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18557915_18560419_18560551_18562035_18562158_18564868_18565022_18567131_18567179_18568401
transcript_103734.known	chr19	+	1344	5	FSM	ENSG00000105700.11	ENST00000222307.9	1344	5	0	0	0	0	multi-exon	FALSE	canonical	3	676	junction_1	102.558215175577	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACACCTAGCTGTGGCTTC	18538604	True	NA	37	True	AATAAA	-27	NA	18557869	18569378	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18557915_18562035_18562158_18564868_18565022_18567131_18567179_18568401
transcript_103740.known	chr19	+	1621	8	FSM	ENSG00000105696.9	ENST00000262817.8	1621	8	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_6	10.6215030259663	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCAGGCTGAGCCTGCTT	18611552	True	NA	10	True	AATAAA	-17	NA	18612869	18621039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18613130_18613871_18614017_18614103_18614196_18615974_18616128_18616999_18617103_18618154_18618273_18618374_18618493_18620407
transcript_103742.known	chr19	+	1683	7	FSM	ENSG00000105696.9	ENST00000598660.1	1683	7	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	7.10438049531571	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTGGGGAGGAATAAACCA	18611559	True	NA	-23	True	TATAAA	-22	NA	18612876	18621006	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18613130_18613871_18614017_18614103_18614196_18615974_18616128_18616999_18617103_18618154_18618493_18620407
transcript_103743.known	chr19	+	764	6	FSM	ENSG00000221983.8	ENST00000596273.5	764	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2895.88842326496	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGCAGCAATTGGTGTC	18450214	True	NA	27	True	AATAAA	-17	NA	18571854	18575229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18571888_18572350_18572608_18573292_18573404_18573661_18573749_18574869_18574973_18575056
transcript_103744.known	chr19	+	779	6	FSM	ENSG00000221983.8	ENST00000595683.5	779	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2894.67223705897	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCCTCATGGCTGATC	18450234	True	NA	40	True	AATAAA	-30	NA	18571874	18575242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18571910_18572350_18572608_18573292_18573404_18573661_18573749_18574869_18574973_18575056
transcript_103749.known	chr19	+	572	5	FSM	ENSG00000221983.8	ENST00000430157.6	572	5	0	0	0	0	multi-exon	FALSE	canonical	3	2550	junction_1	1481.99620444858	937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTCCTCATGGCTGAT	18450161	True	NA	39	True	AATAAA	-29	NA	18571801	18575241	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18571888_18573292_18573404_18573661_18573749_18574869_18574973_18575056
transcript_103752.known	chr19	+	2848	5	FSM	ENSG00000221983.8	ENST00000442744.7	2848	5	0	0	0	0	multi-exon	FALSE	canonical	3	1389	junction_1	1974.99068035776	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCGGCAGGAGAAACTGAC	18450216	True	NA	104	True	NA	NA	NA	18571856	18577550	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18571910_18573292_18573404_18573661_18573749_18574869_18574973_18575056
transcript_103753.nic	chr19	+	1237	5	NIC	ENSG00000221983.8	novel	779	6	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	2569.7604946765	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTCCTCATGGCTGAT	18450216	True	NA	39	True	AATAAA	-29	NA	18571856	18575241	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_18572608_18573292_18573404_18573661_18573749_18574869_18574973_18575056
transcript_103755.known	chr19	+	707	5	FSM	ENSG00000221983.8	ENST00000599551.5	707	5	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	2494.64901088309	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTCCTCATGGCTGAT	18572728	False	NA	39	True	AATAAA	-29	NA	18572739	18575241	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18572961_18573292_18573404_18573661_18573749_18574869_18574973_18575056
transcript_103756.known	chr19	+	668	5	FSM	ENSG00000221983.8	ENST00000598780.5	668	5	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	2504.94764166838	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCTCCTGCCCAGGCCC	18571915	False	NA	-32	True	NA	NA	NA	18571926	18575170	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18572180_18573292_18573404_18573661_18573749_18574869_18574973_18575056
transcript_103759.known	chr19	+	767	5	FSM	ENSG00000006015.18	ENST00000358607.11	767	5	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_2	113.789278932595	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTCTGCCATCTCTGTG	18581594	True	NA	11	True	AATAAA	-17	NA	18588797	18592337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18588901_18588994_18589078_18589412_18589684_18590853_18590934_18592107
transcript_103760.known	chr19	+	702	5	FSM	ENSG00000006015.18	ENST00000450195.6	702	5	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_2	216.607363679077	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGCTCTGCCATCTCTGT	18581592	True	NA	10	True	AATAAA	-16	NA	18588795	18592336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18588901_18588994_18589078_18589478_18589684_18590853_18590934_18592107
transcript_103765.known	chr19	+	491	4	FSM	ENSG00000006015.18	ENST00000601736.1	491	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	270.591122462574	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGCTCTGCCATCTCTGT	18581598	True	NA	10	True	AATAAA	-16	NA	18588801	18592336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18588901_18588994_18589078_18590853_18590934_18592107
transcript_103766.known	chr19	+	1081	4	FSM	ENSG00000006015.18	ENST00000597371.1	1081	4	0	0	0	0	multi-exon	FALSE	canonical	3	582	junction_2	34.9221356098901	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCTGTAGCCGCTCTGC	18581605	True	NA	1	True	AATAAA	-7	NA	18588808	18592327	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18588901_18588994_18589684_18590853_18590934_18592107
transcript_103769.known	chr19	+	2275	3	FSM	ENSG00000006015.18	ENST00000600997.5	2275	3	0	0	0	0	multi-exon	FALSE	canonical	3	582	junction_2	38	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGCTCTGCCATCTCTGT	18581594	True	NA	10	True	AATAAA	-16	NA	18588797	18592336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18588901_18588994_18589684_18590853
transcript_103774.known	chr19	+	743	5	FSM	ENSG00000221983.8	ENST00000595158.5	743	5	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	2508.80982738828	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCAATTGGTGTCCTCAT	18450241	True	NA	32	True	AATAAA	-22	NA	18571881	18575234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18572146_18573292_18573404_18573661_18573749_18574869_18574973_18575056
transcript_103775.known	chr19	+	514	4	FSM	ENSG00000221983.8	ENST00000597451.5	514	4	0	0	0	0	multi-exon	FALSE	canonical	3	5550	junction_3	386.688505130422	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTCCTCATGGCTGAT	18573253	False	NA	39	True	AATAAA	-29	NA	18573264	18575241	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18573404_18573661_18573749_18574869_18574973_18575056
transcript_103776.known	chr19	+	4351	3	FSM	ENSG00000167487.12	ENST00000300976.9	4351	3	0	0	0	0	multi-exon	TRUE	canonical	3	45	junction_1	18	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTTGAATCTTCACTTT	18635601	True	NA	14	True	AAAAAG	-22	NA	18637027	18671721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18637138_18664260_18664444_18667663
transcript_103778.known	chr19	+	6929	15	FSM	ENSG00000105662.16	ENST00000338797.10	6929	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	22.4359632951115	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTCTTCCTCTTTTTTC	18681146	True	NA	16	True	AATAAA	-19	NA	18683677	18782333	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18683829_18742909_18743027_18744107_18744156_18745822_18745961_18747052_18747115_18749780_18749876_18753499_18753586_18759550_18759592_18760007_18760229_18765403_18765529_18768484_18768794_18771441_18771547_18774899_18774987_18775640_18775822_18777170
transcript_103779.known	chr19	+	6879	14	FSM	ENSG00000105662.16	ENST00000321949.13	6879	14	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_11	15.2610421755535	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTCTTCCTCTTTTTTC	18681148	True	NA	16	True	AATAAA	-19	NA	18683679	18782333	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18683829_18742909_18743027_18745822_18745961_18747052_18747115_18749780_18749876_18753499_18753586_18759550_18759592_18760007_18760229_18765403_18765529_18768484_18768794_18771441_18771547_18774899_18774987_18775640_18775822_18777170
transcript_103781.nnic	chr19	+	2509	13	NIC	ENSG00000105662.16	novel	6879	14	NA	NA	-114	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_10	18.2002747232013	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTTATATTTCTGAGC	18681032	True	NA	16	True	AATAAA	-16	NA	18683563	18777952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_18683829_18742909_18743027_18745822_18745961_18747052_18747115_18749780_18749876_18753499_18753586_18759550_18759592_18760007_18760229_18765403_18765529_18768484_18768794_18774899_18774987_18775640_18775822_18777170
transcript_103790.nnic	chr19	+	2124	12	NIC	ENSG00000105662.16	novel	6879	14	NA	NA	-38	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_9	19.1712594808647	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTTATATTTCTGAGC	18681108	True	NA	16	True	AATAAA	-16	NA	18683639	18777952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_18683829_18742909_18743027_18745822_18745961_18747052_18747115_18749780_18749876_18753499_18753586_18759550_18759592_18760007_18760229_18765403_18765529_18774899_18774987_18775640_18775822_18777170
transcript_103793.nic	chr19	+	2113	11	NIC	ENSG00000105662.16	novel	6879	14	NA	NA	-114	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_9	20.1047258126044	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTTATATTTCTGAGC	18681032	True	NA	16	True	AATAAA	-16	NA	18683563	18777952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_18683829_18742909_18743027_18745822_18745961_18747052_18747115_18749780_18749876_18753499_18753586_18759550_18759592_18760007_18760229_18765403_18765529_18775640_18775822_18777170
transcript_103801.nic	chr19	+	2269	5	ISM	ENSG00000105662.16	ENST00000321949.13	6879	14	-40	30790	-38	-26395	5prime_fragment	FALSE	canonical	3	59	junction_4	8.347903928532	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGGAAATGTTTACTCTTA	18681108	True	NA	NA	False	AAAAAG	-5	NA	18683639	18751543	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_18683829_18742909_18743027_18745822_18745961_18747052_18747115_18749780
transcript_103804.nic	chr19	-	1251	7	NIC	ENSG00000223802.9	novel	2094	6	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	102	junction_1	36.8103246386119	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAAGACTTTTGGCTCGA	-18894846	True	NA	-9	True	AATAAA	-14	NA	18896131	18877916	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_18878099_18878929_18879040_18879240_18879389_18880273_18880436_18884086_18884268_18893415_18893576_18895823
transcript_103806.known	chr19	-	2094	6	FSM	ENSG00000223802.9	ENST00000429504.6	2094	6	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_5	17.6567267634746	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGCTCGAGCTGGTAT	-18894850	True	NA	-1	True	AATAAA	-22	NA	18896135	18877908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18879040_18879240_18879389_18880273_18880436_18884086_18884268_18893415_18893576_18895823
transcript_103809.known	chr19	+	2438	14	FSM	ENSG00000105671.12	ENST00000629999.3	2438	14	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_3	56.5605922150394	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACACACACAGCCACGCTT	18917669	True	NA	NA	False	NA	NA	NA	18919704	18929189	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18919857_18920579_18920704_18920833_18920910_18921662_18921749_18921842_18921965_18922325_18922514_18922603_18922745_18924232_18924309_18924622_18924700_18924881_18924980_18926302_18926378_18927765_18927855_18927964_18928037_18928127
transcript_10381.nic	chr1	-	3697	7	NIC	ENSG00000132485.14	novel	1257	10	NA	NA	-25	-2159	intron_retention	FALSE	canonical	3	921	junction_1	61.9876779870179	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAAGTAGAGAGCAAATTA	-71063515	True	NA	NA	False	NA	NA	NA	71081060	71067877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_71070997_71072120_71072256_71072471_71072549_71076794_71076878_71078456_71078566_71078655_71078709_71080939
transcript_103814.known	chr19	+	1793	13	FSM	ENSG00000105671.12	ENST00000247003.9	1793	13	0	0	0	0	multi-exon	TRUE	canonical	3	157	junction_12	8.86785706294869	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGACTTTCGAAGAGCAG	18917679	True	NA	15	True	AATAAA	-21	NA	18919714	18928630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18919857_18920579_18920704_18921662_18921749_18921842_18921965_18922325_18922514_18922603_18922745_18924232_18924309_18924622_18924700_18924881_18924980_18926302_18926378_18927765_18927855_18927964_18928037_18928127
transcript_103815.known	chr19	+	1691	13	FSM	ENSG00000105671.12	ENST00000602113.5	1691	13	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	45.0527468640925	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTCAGTCTGACTTTCG	18917702	True	NA	7	True	AATAAA	-13	NA	18919737	18928622	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18919857_18920650_18920704_18921662_18921749_18921842_18921965_18922325_18922514_18922603_18922745_18924232_18924309_18924622_18924700_18924881_18924980_18926302_18926378_18927765_18927855_18927964_18928037_18928127
transcript_103823.known	chr19	-	1144	11	FSM	ENSG00000105669.14	ENST00000600932.5	1144	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	1049.06484070338	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACCCCCATCTGTTAATAA	-18897778	True	NA	-51	True	NA	NA	NA	18919380	18899562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18899727_18899872_18899948_18900380_18900450_18903267_18903424_18904770_18904853_18905575_18905630_18905866_18905936_18906959_18907113_18910970_18911072_18912983_18913047_18919222
transcript_103830.known	chr19	-	1131	10	FSM	ENSG00000105669.14	ENST00000262812.9	1131	10	0	0	0	0	multi-exon	TRUE	canonical	3	2058	junction_7	215.521131271835	2058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGCTCTGGTCACTTT	-18897785	True	NA	-2	True	AATAAA	-29	NA	18919387	18899513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18899727_18899872_18899948_18900380_18900450_18903267_18903424_18904770_18904853_18905575_18905630_18906959_18907113_18910970_18911072_18912983_18913047_18919222
transcript_103839.known	chr19	-	1607	10	FSM	ENSG00000051128.19	ENST00000542541.6	1607	10	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_9	98.5169033562951	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGGCTGGTTTTCTATG	-18937913	False	NA	NA	False	NA	NA	NA	18940304	18929442	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18929635_18931324_18931412_18931508_18931626_18931975_18932133_18932923_18933046_18934302_18934411_18938352_18938485_18938727_18938885_18938968_18939050_18939850
transcript_10384.nic	chr1	-	2765	7	NIC	ENSG00000132485.14	novel	1257	10	NA	NA	-13	-3079	intron_retention	FALSE	canonical	3	921	junction_1	61.9876779870179	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAATAGTAGTTCAAATAAA	-71063503	True	NA	NA	False	NA	NA	NA	71081048	71068797	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_71070997_71072120_71072256_71072471_71072549_71076794_71076878_71078456_71078566_71078655_71078709_71080939
transcript_103841.known	chr19	-	1560	10	FSM	ENSG00000051128.19	ENST00000392351.8	1560	10	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_9	57.8964593045205	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTGTGTGTGGTATGT	-18938826	True	NA	-4	True	NA	NA	NA	18941217	18929202	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18929635_18931324_18931412_18931508_18931626_18931975_18932133_18932923_18933046_18934302_18934411_18938352_18938485_18938727_18938885_18938968_18939050_18941050
transcript_103842.nic	chr19	-	1482	10	NIC	ENSG00000051128.19	novel	1560	10	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	102.128942947895	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTGTGTGTGTGTGGTA	-18938893	True	NA	-7	True	NA	NA	NA	18941284	18929205	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_18929635_18931324_18931412_18931508_18931626_18931975_18932133_18932923_18933046_18934302_18934411_18938352_18938485_18938727_18938885_18938968_18939050_18941192
transcript_103846.known	chr19	-	907	9	FSM	ENSG00000105669.14	ENST00000351079.8	907	9	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_6	849.074900995195	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACCCCCAGCACCCCCAT	-18897773	True	NA	-61	True	NA	NA	NA	18919375	18899572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18899727_18899872_18899948_18900380_18900450_18903267_18903424_18904770_18904853_18905575_18905630_18910970_18911072_18912983_18913047_18919222
transcript_103851.known	chr19	-	948	9	FSM	ENSG00000105669.14	ENST00000349893.8	948	9	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_3	792.144074253541	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGATGTGCTCTGGTCAC	-18897761	True	NA	-5	True	AATAAA	-26	NA	18919363	18899516	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18899727_18899872_18899948_18900380_18900450_18904770_18904853_18905575_18905630_18906959_18907113_18910970_18911072_18912983_18913047_18919222
transcript_103867.known	chr19	+	1882	14	FSM	ENSG00000105671.12	ENST00000595858.5	1882	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	67.9700595415573	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTCTGACTTTCGAAGA	18917691	True	NA	11	True	AATAAA	-17	NA	18919726	18928626	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_18919857_18920579_18920704_18920833_18920910_18921662_18921749_18921842_18921965_18922325_18922514_18922603_18922745_18924232_18924309_18924622_18924700_18924852_18924980_18926302_18926378_18927765_18927855_18927964_18928037_18928127
transcript_10388.nic	chr1	-	447	6	ISM	ENSG00000132485.14	ENST00000611683.1	1257	10	246	6516	-8	-6516	5prime_fragment	FALSE	canonical	3	938	junction_1	59.756171229422	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGAGGGAAAGCAGTTGG	-71063498	True	NA	NA	False	AAAAAG	-7	NA	71081043	71072234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_71072256_71072471_71072549_71076794_71076878_71078456_71078566_71078655_71078709_71080939
transcript_10390.nic	chr1	-	420	5	ISM	ENSG00000132485.14	ENST00000611683.1	1257	10	252	6753	-2	-6753	5prime_fragment	FALSE	canonical	3	958	junction_4	57.1161098115059	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCTATATTTTGGTGTT	-71063492	True	NA	0	True	AATATA	-36	NA	71081037	71072471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_71072549_71076794_71076878_71078456_71078566_71078655_71078709_71080939
transcript_103909.known	chr19	-	3640	11	FSM	ENSG00000064607.17	ENST00000337018.10	3640	11	0	0	0	0	multi-exon	FALSE	canonical	3	413	junction_10	34.4557687477729	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCTGGGGTCTCCATGG	-19026237	True	NA	-11	True	AATAAA	-16	NA	19033559	18990892	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18991150_18994365_18994487_18995143_18995281_19001612_19001675_19004167_19004647_19008316_19008429_19009854_19010343_19019108_19019230_19024618_19026227_19030950_19031083_19033436
transcript_103910.nic	chr19	-	3613	11	NIC	ENSG00000064607.17	novel	3640	11	NA	NA	-25	0	intron_retention	FALSE	canonical	3	15	junction_10	142.475120635148	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCTGGGGTCTCCATGG	-19033555	False	NA	-11	True	AATAAA	-16	NA	19033584	18990892	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_18991150_18994365_18994487_18995143_18995281_19001612_19001675_19004167_19004647_19008316_19008429_19009854_19010343_19019108_19019230_19024618_19026227_19030950_19031083_19033488
transcript_103917.known	chr19	-	6189	11	FSM	ENSG00000064607.17	ENST00000452918.7	6189	11	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	109.305123393188	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCTGGGGTCTCCATGG	-19026195	True	NA	-11	True	AATAAA	-16	NA	19033517	18990892	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18993741_18994365_18994487_18995143_18995281_19001612_19001675_19004167_19004647_19008316_19008429_19009854_19010343_19019108_19019230_19024618_19026227_19030950_19031083_19033436
transcript_103955.known	chr19	+	2461	9	FSM	ENSG00000105676.14	ENST00000535612.6	2461	9	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	141.477416484045	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGGTCTCTTCCATAGCT	19030223	True	NA	20	True	AATAAA	-21	NA	19033602	19058176	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19033931_19034130_19034239_19042710_19042878_19043991_19044075_19051621_19052196_19054151_19054322_19055264_19055397_19055790_19055929_19057415
transcript_10396.known	chr1	+	4692	4	FSM	ENSG00000254685.8	ENST00000370898.9	4692	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	8.16496580927726	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATACTCTGAAATTGTCA	74197432	True	NA	NA	False	AATAAA	-16	NA	74198241	74208702	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_74198361_74199663_74199832_74201317_74201411_74204390
transcript_103978.nnic	chr19	+	2346	8	NNC	ENSG00000105676.14	novel	2383	8	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_7	149.463530464042	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGGGTCTCTTCCATAGC	19030252	True	NA	19	True	AATAAA	-20	NA	19033631	19058175	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_19033931_19042710_19042878_19043991_19044075_19051621_19052196_19054151_19054322_19055264_19055397_19055790_19055929_19057392
transcript_103979.known	chr19	+	2383	8	FSM	ENSG00000105676.14	ENST00000392335.6	2383	8	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_1	50.079121072029	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTCTCTTCCATAGCTTG	19033542	False	NA	22	True	AATAAA	-23	NA	19033574	19058178	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19033931_19042710_19042878_19043991_19044075_19051621_19052196_19054151_19054322_19055264_19055397_19055790_19055929_19057415
transcript_103983.known	chr19	+	2412	8	FSM	ENSG00000105676.14	ENST00000269932.10	2412	8	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	123.618075423575	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGGGTGAACAGCGGAG	19030230	True	NA	3	True	AATAAA	-4	NA	19033609	19058159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19034014_19042710_19042878_19043991_19044075_19051621_19052196_19054151_19054322_19055264_19055397_19055790_19055929_19057415
transcript_104.known	SIRV3	+	779	5	FSM	SIRV3A	SIRV307	779	5	0	0	0	0	multi-exon	FALSE	canonical	3	1338	junction_4	964.45253252817	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTAACGTCTCGTAAGAC	NA	False	NA	NA	False	NA	NA	NA	1963	8939	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV3_+_2006_4003_4081_4574_4775_6057_6334_8755
transcript_10402.known	chr1	-	2301	10	FSM	ENSG00000116791.14	ENST00000417775.5	2301	10	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_9	186.153925423606	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCTGCTTTTCTAGTTT	-74733216	True	NA	-22	True	AATAAA	-15	NA	74733408	74705489	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_74706458_74706898_74706995_74707102_74707205_74710097_74710248_74714578_74714631_74719208_74719373_74723117_74723271_74724710_74724835_74730381_74730421_74732955
transcript_104023.known	chr19	-	5546	10	FSM	ENSG00000064607.17	ENST00000601879.5	5546	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	154.394156481246	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	-19033994	False	29	NA	False	NA	NA	NA	19034023	18992366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_18994487_18995143_18995281_19001612_19001675_19004167_19004647_19008316_19008429_19009854_19010343_19019108_19019230_19024618_19026227_19030950_19031108_19033761
transcript_104024.known	chr19	-	764	2	FSM	ENSG00000064607.17	ENST00000598202.1	764	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTCAGGGCACTAACCAAA	-19026208	True	NA	NA	False	NA	NA	NA	19033530	19025556	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19026227_19033436
transcript_104026.known	chr19	+	3267	8	FSM	ENSG00000181035.14	ENST00000318596.8	3267	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	6.94879228972303	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTGTTTGAATTAATACA	19063836	True	NA	NA	False	AATAAA	-31	NA	19063993	19113030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19064116_19096090_19096206_19101780_19101887_19104912_19104939_19105560_19105728_19106268_19106386_19107893_19108046_19110568
transcript_104030.nic	chr19	+	2845	4	ISM	ENSG00000181035.14	ENST00000318596.8	3267	8	41477	143	-392	-143	3prime_fragment	FALSE	canonical	3	21	junction_1	4.98887651569859	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCCTGCTCCTGGCTCTT	19105434	True	NA	11	True	AATAAA	-16	NA	19105470	19112887	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_19105728_19106268_19106386_19107893_19108046_19110568
transcript_104036.known	chr19	-	1654	12	FSM	ENSG00000064545.15	ENST00000587583.6	1654	12	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_8	86.5616867894492	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCTCTTCTGAACAAATAA	-19132957	True	NA	-46	True	NA	NA	NA	19138447	19119659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19120184_19120764_19120862_19120991_19121167_19121307_19121422_19121524_19121669_19121758_19121820_19130155_19130308_19132351_19132434_19132656_19132755_19133129_19133211_19134783_19134888_19138425
transcript_104039.known	chr19	-	2251	12	FSM	ENSG00000064545.15	ENST00000162044.14	2251	12	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_11	36.8591242614677	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	-19132988	True	NA	NA	False	NA	NA	NA	19138478	19119168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19120184_19120764_19120862_19120991_19121167_19121307_19121422_19121524_19121669_19121758_19121820_19130155_19130308_19132351_19132509_19132656_19132755_19133129_19133211_19134783_19134888_19138425
transcript_10404.known	chr1	-	1908	9	FSM	ENSG00000116791.14	ENST00000340866.10	1908	9	0	0	0	0	multi-exon	FALSE	canonical	3	427	junction_2	37.2558720203943	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTTTTCTAGTTTTTAT	-74727789	True	NA	-18	True	AATAAA	-19	NA	74733050	74705485	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_74706458_74706898_74706995_74707102_74707205_74710097_74710248_74714578_74714631_74719208_74719373_74723117_74723271_74724710_74724835_74732955
transcript_104040.nic	chr19	-	1795	12	NIC	ENSG00000064545.15	novel	2251	12	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_11	87.2324717764629	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTGAGTGGTTTGGGAC	-19133009	True	NA	-1	True	AATAAA	-25	NA	19138499	19119614	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_19120184_19120764_19120862_19120991_19121167_19121307_19121422_19121524_19121669_19121758_19121820_19130155_19130308_19132351_19132509_19132656_19132755_19133129_19133211_19134783_19134888_19138456
transcript_104041.nic	chr19	-	1849	12	NIC	ENSG00000064545.15	novel	1923	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_11	85.0371819503068	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTGAGTGGTTTGGGAC	-19133003	True	NA	-1	True	AATAAA	-25	NA	19138493	19119614	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_19120184_19120764_19120862_19120991_19121167_19121307_19121422_19121524_19121669_19121758_19121820_19130155_19130308_19132351_19132509_19132656_19132755_19133129_19133211_19134783_19134917_19138425
transcript_104052.nic	chr19	-	1711	11	NIC	ENSG00000064545.15	novel	2251	12	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_10	89.4686537285546	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTGAGTGGTTTGGGAC	-19132998	True	NA	-1	True	AATAAA	-25	NA	19138488	19119614	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_19120184_19120764_19120862_19120991_19121167_19121307_19121422_19121524_19121669_19121758_19121820_19130155_19130308_19132351_19132509_19132656_19132755_19133129_19133211_19138425
transcript_104060.known	chr19	-	1923	11	FSM	ENSG00000064545.15	ENST00000587406.5	1923	11	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_10	37.8549864614954	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTGAGTGGTTTGGGAC	-19133003	True	NA	-1	True	AATAAA	-25	NA	19138493	19119614	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19120184_19120764_19120862_19120991_19121167_19121307_19121669_19121758_19121820_19130155_19130308_19132351_19132509_19132656_19132755_19133129_19133211_19134783_19134888_19138425
transcript_104066.known	chr19	-	1930	10	FSM	ENSG00000064545.15	ENST00000450333.6	1930	10	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_6	89.7400910998941	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	-19132976	True	NA	NA	False	NA	NA	NA	19138466	19119168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19120184_19120764_19120862_19120991_19121167_19121307_19121422_19121524_19121669_19121758_19121820_19132656_19132755_19133129_19133211_19134783_19134888_19138425
transcript_10407.known	chr1	-	1292	8	FSM	ENSG00000116791.14	ENST00000370871.7	1292	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	166.94689367018	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGACTGCTCAGTTTCC	-74727761	True	NA	NA	False	ATTAAA	-15	NA	74733022	74705971	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_74706458_74706898_74706995_74710097_74710248_74714578_74714631_74719208_74719373_74723117_74723271_74724710_74724835_74732955
transcript_104083.known	chr19	-	1754	12	FSM	ENSG00000064545.15	ENST00000587985.6	1754	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	90.0468197776363	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGCATGCCGATTTTTAC	-19132972	True	NA	-26	True	NA	NA	NA	19138462	19119639	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19120184_19120764_19120862_19120991_19121167_19121317_19121422_19121524_19121669_19121758_19121820_19130155_19130308_19132351_19132509_19132656_19132755_19133129_19133211_19134783_19134888_19138425
transcript_104088.known	chr19	-	1804	13	FSM	ENSG00000064489.23	ENST00000602804.5	1804	13	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	58.4586154661759	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGACTGACTGTGACTCGC	-19188927	True	NA	-8	True	AATAAA	-21	NA	19192158	19145571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19146023_19146272_19146385_19146554_19146649_19146741_19146876_19147035_19147184_19147697_19147833_19149225_19149430_19150681_19150765_19180685_19180762_19182572_19182684_19186033_19186099_19186892_19187006_19192080
transcript_104097.known	chr19	+	1376	10	FSM	ENSG00000064490.14	ENST00000303088.9	1376	10	0	0	0	0	multi-exon	FALSE	canonical	2	33	junction_1	111.279206181546	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGACTTTGCTGTGCTT	19192020	True	NA	6	True	AATAAA	-15	NA	19192257	19201866	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19192555_19192959_19193101_19193938_19194134_19196962_19197047_19197185_19197252_19197520_19197622_19198106_19198233_19198656_19198724_19199153_19199235_19201648
transcript_10410.known	chr1	+	3437	6	FSM	ENSG00000162623.16	ENST00000370867.8	3437	6	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_3	15.4090882274066	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTAGTCTTAGTGTC	74729581	True	NA	NA	False	AATAAA	-16	NA	74733151	74766677	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_74733419_74736541_74736623_74738689_74738789_74748750_74748823_74752291_74752426_74763893
transcript_104105.known	chr19	+	1212	9	FSM	ENSG00000064490.14	ENST00000407360.7	1212	9	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_2	68.7818108223388	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGGACAGGTGGTGGG	19192608	False	NA	-58	True	NA	NA	NA	19192762	19201802	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19193101_19193938_19194134_19196962_19197047_19197185_19197252_19197520_19197622_19198106_19198233_19198656_19198724_19199153_19199235_19201648
transcript_104107.nic	chr19	+	1514	9	NIC	ENSG00000064490.14	novel	1376	10	NA	NA	-241	0	intron_retention	FALSE	canonical	3	233	junction_2	43.5423644282209	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGACTTTGCTGTGCTT	19192284	False	NA	6	True	AATAAA	-15	NA	19192521	19201866	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_19193101_19193938_19194134_19196965_19197047_19197185_19197252_19197520_19197622_19198106_19198233_19198656_19198724_19199153_19199235_19201648
transcript_104110.known	chr19	-	1425	9	FSM	ENSG00000213999.17	ENST00000424583.7	1425	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	10.558616149856	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTGTGACTCGCCTCAT	-19170202	True	NA	-3	True	AATAAA	-26	NA	19170263	19145566	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19146023_19146272_19146385_19146554_19146649_19146741_19146876_19147035_19147184_19147697_19147833_19149225_19149430_19150681_19150765_19170204
transcript_104114.known	chr19	+	1059	8	FSM	ENSG00000064490.14	ENST00000392324.8	1059	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	116.70580490258	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGACTTTGCTGTGCTT	19189515	True	NA	6	True	AATAAA	-15	NA	19192910	19201866	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19193101_19193938_19194134_19196965_19197047_19197520_19197622_19198106_19198233_19198656_19198724_19199153_19199235_19201648
transcript_104121.known	chr19	-	992	6	FSM	ENSG00000254901.8	ENST00000462790.8	992	6	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	28.3379604064936	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTTGAGTCCGTTTCTG	-19188921	True	NA	-4	True	NA	NA	NA	19192152	19176905	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19177461_19180685_19180762_19182572_19182684_19186033_19186099_19186892_19187006_19192080
transcript_104122.known	chr19	-	877	6	FSM	ENSG00000254901.8	ENST00000494489.6	877	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_5	59.2466032781627	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGAGAACATTGTGTGGA	-19192498	True	NA	-106	True	NA	NA	NA	19192588	19177007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19177461_19180685_19180762_19182572_19182684_19186033_19186099_19186892_19187006_19192529
transcript_104124.known	chr19	-	3149	6	FSM	ENSG00000254901.8	ENST00000488252.6	3149	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	62.0709271720666	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGAGTCCGTTTCTGCTG	-19192322	False	NA	-1	True	NA	NA	NA	19192412	19176902	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19177516_19178846_19180762_19182572_19182684_19186033_19186099_19186892_19187006_19192080
transcript_104127.known	chr19	-	859	6	FSM	ENSG00000184162.15	ENST00000420605.7	859	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	63.6917577085136	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAAATGTGTGAATTGTG	-19201893	True	NA	-7	True	TATAAA	-15	NA	19203357	19201415	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19201564_19201930_19202042_19202330_19202399_19202469_19202576_19202790_19202882_19203022
transcript_104129.known	chr19	-	1290	5	FSM	ENSG00000184162.15	ENST00000331552.12	1290	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	65.8691885482127	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGAATTGTGACTTTCA	-19201950	True	NA	0	True	TATAAA	-22	NA	19203414	19201408	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19202042_19202330_19202399_19202469_19202576_19202790_19202882_19203022
transcript_104131.known	chr19	-	801	4	FSM	ENSG00000254901.8	ENST00000585679.1	801	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	38.6091526281874	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTTGAGTCCGTTTCTG	-19188908	True	NA	-4	True	NA	NA	NA	19192139	19176905	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19177461_19180685_19180762_19182572_19182684_19192080
transcript_104132.known	chr19	-	1489	4	FSM	ENSG00000254901.8	ENST00000477565.3	1489	4	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_3	14.0079342596338	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACACTCATGTGCCAGGA	-19192499	True	NA	-9	True	AATAAA	-13	NA	19192589	19181881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19182684_19186033_19186099_19186892_19187006_19192080
transcript_104134.known	chr19	-	899	4	FSM	ENSG00000184162.15	ENST00000544883.5	899	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	72.692655902933	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGGAAAAGGTGGGCTGT	-19201895	True	NA	NA	False	NA	NA	NA	19203359	19201638	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19202042_19202330_19202399_19202790_19202882_19203022
transcript_104135.known	chr19	-	891	4	FSM	ENSG00000184162.15	ENST00000538165.2	891	4	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	16.1107279647928	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCCCACGCTCACACTT	-19201911	True	NA	NA	False	NA	NA	NA	19203375	19202057	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19202399_19202469_19202576_19202790_19202882_19203022
transcript_104138.known	chr19	-	572	2	FSM	ENSG00000254901.8	ENST00000462498.1	572	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCCATCAGCATCCGGGA	-19192501	True	NA	NA	False	NA	NA	NA	19192591	19182622	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19182684_19192080
transcript_104139.known	chr19	-	375	2	FSM	ENSG00000184162.15	ENST00000539678.1	375	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATCACCAGTTTCCCTT	-19201380	False	NA	NA	False	NA	NA	NA	19202844	19202077	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19202399_19202790
transcript_104140.known	chr19	+	389	3	FSM	ENSG00000064490.14	ENST00000540977.1	389	3	0	0	0	0	multi-exon	FALSE	canonical	3	359	junction_2	6.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGACTTTGCTGTGCTTCCC	19198625	False	NA	9	True	AATAAA	-18	NA	19198636	19201869	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19198724_19199153_19199235_19201648
transcript_104141.known	chr19	+	6402	15	FSM	ENSG00000130287.14	ENST00000252575.11	6402	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_12	9.25406694929537	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCCGTCACCACCTGAT	19211823	True	NA	12	True	AATAAA	-17	NA	19211957	19252233	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19212065_19216946_19217027_19218914_19219317_19224020_19224196_19224305_19224434_19224976_19225271_19226485_19227074_19227280_19228640_19233788_19233906_19234982_19235097_19238252_19238412_19240602_19240686_19245312_19245458_19248699_19248883_19249765
transcript_104143.nic	chr19	+	3924	11	ISM	ENSG00000130287.14	ENST00000252575.11	6402	15	-20	13441	-20	0	5prime_fragment	FALSE	canonical	3	13	junction_3	7.26704891960966	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGATCCTATGTGTGCTG	19211803	True	NA	19	True	AGTAAA	-32	NA	19211937	19238792	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_19212065_19216946_19217027_19218914_19219317_19224020_19224196_19224305_19224434_19224976_19225271_19226485_19227074_19227280_19228640_19233788_19233906_19234982_19235097_19238252
transcript_104149.known	chr19	-	1518	10	FSM	ENSG00000213996.13	ENST00000389363.5	1518	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	6.68515953621837	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCACTGCCTAAGTGTTTC	-19272930	True	NA	-4	True	AGTAAA	-21	NA	19273301	19264365	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19264874_19266489_19266610_19267620_19267714_19267985_19268088_19268629_19268755_19269686_19269770_19270172_19270277_19270344_19270443_19271021_19271126_19273120
transcript_104154.nic	chr19	-	3554	4	ISM	ENSG00000187664.9	ENST00000291481.8	4342	5	1069	885	-52	-885	3prime_fragment	FALSE	canonical	3	47	junction_2	12.4988888395018	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGCAGCCAGTGGGTAAT	-19260666	True	NA	-6	True	AATAAA	-29	NA	19261735	19255640	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_19258209_19258522_19258856_19260812_19261176_19261445
transcript_104163.known	chr19	-	2566	14	FSM	ENSG00000105705.16	ENST00000247001.10	2566	14	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_9	56.8197607096386	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGGCTAAAGGAATGTCA	-19317663	True	NA	NA	False	AATAAA	-19	NA	19320509	19276032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19276675_19276946_19277077_19277733_19277880_19278689_19278797_19279212_19279391_19280184_19280292_19296988_19297345_19302264_19302389_19303347_19303449_19303723_19303848_19305848_19306077_19310096_19310201_19316421_19316594_19320462
transcript_104164.known	chr19	-	2282	14	FSM	ENSG00000105705.16	ENST00000588731.6	2282	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	98.3043817908945	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGATGCCTGGTCCTGTTGC	-19317663	True	NA	-3	True	AATAAA	-21	NA	19320509	19276512	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19276675_19276946_19277077_19277733_19277880_19278689_19278797_19279212_19279391_19280184_19280292_19296988_19297345_19302264_19302389_19303347_19303449_19303723_19304044_19305848_19306077_19310096_19310201_19316421_19316594_19320462
transcript_104168.nic	chr19	+	3851	19	NIC	ENSG00000129933.21	novel	4845	19	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_13	38.9455539547136	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTAATATTCTACTCGAG	19315669	True	NA	5	True	ATTAAA	-15	NA	19320820	19357755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_19321136_19335717_19335736_19336121_19336188_19337169_19337266_19338844_19338940_19340845_19340874_19341251_19341408_19342534_19342682_19342775_19342867_19343836_19343941_19344848_19344927_19345303_19345370_19347279_19347364_19348888_19348939_19349154_19349233_19349324_19349437_19354354_19354446_19355263_19355392_19355707
transcript_104169.nic	chr19	+	4171	19	NIC	ENSG00000129933.21	novel	4845	19	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_13	38.9455539547136	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAACAA	19315673	True	NA	NA	False	NA	NA	NA	19320824	19358079	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_19321136_19335717_19335736_19336121_19336188_19337169_19337266_19338844_19338940_19340845_19340874_19341251_19341408_19342534_19342682_19342775_19342867_19343836_19343941_19344848_19344927_19345303_19345370_19347279_19347364_19348888_19348939_19349154_19349233_19349324_19349437_19354354_19354446_19355263_19355392_19355707
transcript_104170.nic	chr19	+	4968	19	NIC	ENSG00000129933.21	novel	4845	19	NA	NA	-126	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_13	38.9455539547136	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCTGTGTCTTTGTTGTT	NA	False	NA	17	True	AGTAAA	-18	NA	19320702	19358754	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_19321136_19335717_19335736_19336121_19336188_19337169_19337266_19338844_19338940_19340845_19340874_19341251_19341408_19342534_19342682_19342775_19342867_19343836_19343941_19344848_19344927_19345303_19345370_19347279_19347364_19348888_19348939_19349154_19349233_19349324_19349437_19354354_19354446_19355263_19355392_19355707
transcript_104172.known	chr19	+	4845	19	FSM	ENSG00000129933.21	ENST00000262815.13	4845	19	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_13	25.2826002725829	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCTGTGTCTTTGTTGTT	19315677	True	NA	17	True	AGTAAA	-18	NA	19320828	19358754	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19321136_19335717_19335736_19336121_19336188_19337169_19337266_19338844_19338940_19340845_19340874_19341251_19341408_19342534_19342682_19342775_19342867_19343836_19343941_19344848_19344927_19345303_19345370_19347279_19347367_19348888_19348939_19349154_19349233_19349324_19349437_19354354_19354446_19355263_19355392_19355707
transcript_104200.known	chr19	+	5671	12	FSM	ENSG00000167491.18	ENST00000360315.7	5671	12	0	0	0	0	multi-exon	TRUE	canonical	3	42	junction_8	232.481119823482	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTCTTTTGTCCCTTCT	19384552	True	NA	17	True	AATAAA	-20	NA	19385832	19508931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19386139_19465339_19465615_19492305_19492439_19492580_19492713_19494293_19494384_19495753_19495886_19496051_19496220_19498442_19498723_19501120_19501417_19501968_19502044_19502330_19502527_19505343
transcript_104206.known	chr19	+	5714	12	FSM	ENSG00000167491.18	ENST00000683918.1	5714	12	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_1	93.1054676115939	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTTTGTCCCTTCTG	19393661	True	NA	18	True	AATAAA	-21	NA	19405674	19508932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19406020_19465339_19465615_19492305_19492439_19492580_19492713_19494293_19494384_19495753_19495886_19496051_19496220_19498442_19498723_19501117_19501417_19501968_19502044_19502330_19502527_19505343
transcript_104218.known	chr19	+	521	5	FSM	ENSG00000186010.19	ENST00000507754.9	521	5	0	0	0	0	multi-exon	FALSE	canonical	3	9353	junction_3	208.03665542399	2127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGTTTTCCTGGGGA	19476256	True	NA	27	True	AATAAA	-17	NA	19516224	19528198	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19516333_19526181_19526261_19527280_19527353_19527700_19527771_19528006
transcript_104219.known	chr19	+	1166	5	FSM	ENSG00000186010.19	ENST00000502506.6	1166	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	4168.40802945201	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGTTTTCCTGGGG	19515711	True	NA	26	True	AATAAA	-16	NA	19515735	19528197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19516333_19526024_19526261_19527280_19527353_19527700_19527771_19528006
transcript_10422.nic	chr1	+	660	5	ISM	ENSG00000162623.16	ENST00000370867.8	3437	6	-38	14283	-38	0	5prime_fragment	FALSE	canonical	3	182	junction_3	12.3970762682174	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATGGAGGAAAACAAGAAA	74733101	False	NA	NA	False	AATATA	-31	NA	74733113	74752394	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_74733419_74736541_74736623_74738689_74738789_74748750_74748823_74752291
transcript_104220.known	chr19	+	576	4	FSM	ENSG00000186010.19	ENST00000428459.6	576	4	0	0	0	0	multi-exon	FALSE	canonical	3	9353	junction_3	135.534333493604	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACACAACCCGCTGGGTG	19476261	True	NA	NA	False	NA	NA	NA	19516229	19528022	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19516333_19526181_19526261_19527280_19527353_19527700
transcript_104226.known	chr19	+	4199	8	FSM	ENSG00000160161.9	ENST00000291495.5	4199	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	10.4861424591443	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGGTGTCAGGCTCTAG	19537588	True	NA	35	True	ATTAAA	-17	NA	19538264	19546659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19538414_19539678_19539778_19540203_19540477_19541090_19541247_19542374_19542651_19542863_19542973_19543247_19543406_19543680
transcript_10423.known	chr1	+	3335	5	FSM	ENSG00000162623.16	ENST00000457880.6	3335	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	89.6813804532468	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTGTGTAGTCTTAGT	74729581	True	NA	NA	False	AATAAA	-13	NA	74733151	74766674	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_74733419_74736541_74736623_74748750_74748823_74752291_74752426_74763893
transcript_104230.known	chr19	-	1495	8	FSM	ENSG00000105717.14	ENST00000251203.14	1495	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	5.57692037026947	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCGATGTCTGTTTGCCAG	-19618184	False	2297	-5	True	ATTAAA	-19	NA	19618687	19561712	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19562118_19563508_19563616_19564932_19565090_19569448_19569585_19570108_19570300_19570585_19570834_19599291_19599366_19618510
transcript_104231.known	chr19	-	1416	8	FSM	ENSG00000105717.14	ENST00000557978.6	1416	8	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_4	5.04267502706365	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTTTGCCAGATTTGT	-19618190	False	2297	1	True	ATTAAA	-25	NA	19618693	19561706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19562118_19563508_19563616_19564932_19565090_19569448_19569585_19570098_19570300_19570686_19570834_19599291_19599366_19618510
transcript_104239.known	chr19	-	2546	6	FSM	ENSG00000064547.14	ENST00000542587.5	2546	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	68.4356632173606	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCTCCAAAACATTTG	-19628736	False	NA	-28	True	AGTAAA	-16	NA	19628930	19623668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19624570_19626542_19627285_19627396_19627505_19627753_19627970_19628091_19628168_19628427
transcript_104248.nic	chr19	-	2453	5	NIC	ENSG00000064547.14	novel	2546	6	NA	NA	-38	0	intron_retention	FALSE	canonical	3	16	junction_4	63.0277716566277	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCTCCAAAACATTTG	-19628394	False	NA	-28	True	AGTAAA	-16	NA	19628588	19623668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_19624570_19626542_19627285_19627396_19627970_19628091_19628168_19628427
transcript_104251.nnic	chr19	-	1900	4	NIC	ENSG00000064547.14	novel	2546	6	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	73.0114146326906	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCTCCAAAACATTTG	-19628382	False	NA	-28	True	AGTAAA	-16	NA	19628576	19623668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_19624570_19626542_19627285_19627396_19627505_19628427
transcript_104256.known	chr19	-	1823	3	FSM	ENSG00000064547.14	ENST00000586703.1	1823	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	96.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTCTCCAAAACATTTGT	-19625911	True	NA	-27	True	AGTAAA	-17	NA	19628208	19623667	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19624570_19626542_19627347_19628091
transcript_104261.known	chr19	-	1786	3	FSM	ENSG00000064547.14	ENST00000407877.8	1786	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	69.5	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTTGTTATCAATTCA	-19625923	True	NA	-14	True	AGTAAA	-30	NA	19628220	19623654	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19624570_19626542_19627285_19628091
transcript_104264.known	chr19	-	3528	21	FSM	ENSG00000089639.11	ENST00000203556.9	3528	21	0	0	0	0	multi-exon	TRUE	canonical	3	69	junction_8	15.1105095877009	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTTGGGTGCATCTCTG	-19641622	True	NA	-4	True	AATAAA	-13	NA	19643657	19629475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19630337_19630470_19630538_19633802_19634191_19634506_19634704_19634791_19634930_19635024_19635214_19635414_19635570_19635643_19635722_19636706_19636797_19636916_19637030_19637364_19637562_19637919_19638058_19638158_19638330_19638401_19638483_19640084_19640193_19640295_19640361_19640445_19640572_19641809_19641868_19641975_19642052_19642534_19642620_19643510
transcript_104266.known	chr19	-	2987	20	FSM	ENSG00000089639.11	ENST00000587238.5	2987	20	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	19.2280381610695	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGGTTCCTATAAGGAAAA	-19641526	True	NA	NA	False	NA	NA	NA	19643561	19629842	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19630337_19630470_19630538_19633802_19634191_19634506_19634704_19634791_19634930_19635024_19635214_19635414_19635570_19636706_19636797_19636916_19637030_19637364_19637562_19637919_19638058_19638158_19638330_19638401_19638483_19640084_19640193_19640295_19640361_19640445_19640572_19641809_19641868_19641975_19642052_19642534_19642620_19643510
transcript_104267.nic	chr19	-	3356	20	NIC	ENSG00000089639.11	novel	3528	21	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	21.2295200316828	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTTGGGTGCATCTCTG	-19643640	False	NA	-4	True	AATAAA	-13	NA	19643682	19629475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_19630337_19630470_19630538_19633802_19634191_19634791_19634930_19635024_19635214_19635414_19635570_19635643_19635722_19636706_19636797_19636916_19637030_19637364_19637562_19637919_19638058_19638158_19638330_19638401_19638483_19640084_19640193_19640295_19640361_19640445_19640572_19641809_19641868_19641975_19642052_19642534_19642620_19643510
transcript_104277.nic	chr19	-	3784	26	NIC	ENSG00000105726.17	novel	3849	26	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	82	junction_13	89.9322945331653	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGCCTCCACCTCGTCT	-19654937	True	NA	-2	True	AATAAA	-23	NA	19663681	19645197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_19645533_19645646_19645791_19645873_19645986_19646204_19646348_19647128_19647326_19647413_19647529_19647598_19647760_19649566_19649664_19649740_19649941_19651688_19651798_19652594_19652721_19653783_19653895_19653968_19654075_19654542_19654701_19655118_19655240_19655315_19655454_19655527_19655655_19655877_19655934_19656053_19656184_19656659_19656767_19656846_19656917_19656993_19657150_19657335_19657409_19659600_19659792_19659897_19659988_19663270
transcript_104279.known	chr19	-	3849	26	FSM	ENSG00000105726.17	ENST00000357324.11	3849	26	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_13	51.906469731624	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGCCTCCACCTCGTCT	-19654932	True	NA	-2	True	AATAAA	-23	NA	19663676	19645197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19645533_19645646_19645791_19645873_19645986_19646204_19646348_19647128_19647326_19647413_19647529_19647598_19647760_19649566_19649664_19649740_19649941_19651688_19651798_19652594_19652721_19653783_19653895_19653968_19654145_19654542_19654701_19655118_19655240_19655315_19655454_19655527_19655655_19655877_19655934_19656053_19656184_19656659_19656767_19656846_19656917_19656993_19657150_19657335_19657409_19659600_19659792_19659897_19659988_19663270
transcript_10428.known	chr1	+	2578	13	FSM	ENSG00000117054.15	ENST00000681430.1	2578	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_10	185.568252642765	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAAAGTTACCTGTTCA	75724151	False	NA	-69	True	AAAAAG	-19	NA	75724430	75763596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_75724818_75728400_75728489_75732643_75732742_75732852_75732923_75733527_75733629_75734790_75734872_75739979_75740111_75745805_75745915_75749418_75749560_75750450_75750547_75750769_75750892_75761121_75761371_75762691
transcript_104280.nnic	chr19	-	4273	26	NNC	ENSG00000105726.17	novel	3849	26	NA	NA	-391	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_24	98.6777056887725	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGCCTCCACCTCGTCT	-19663995	True	NA	-2	True	AATAAA	-23	NA	19664067	19645197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_19645533_19645646_19645791_19645873_19645986_19646204_19646348_19647128_19647326_19647413_19647529_19647598_19647760_19649566_19649664_19649740_19649941_19651688_19651798_19652594_19652721_19653783_19653895_19653968_19654145_19654542_19654701_19655118_19655240_19655315_19655454_19655527_19655655_19655877_19655934_19656053_19656184_19656659_19656767_19656846_19656917_19656993_19657150_19657335_19657409_19659600_19659825_19659897_19659988_19663270
transcript_104290.known	chr19	+	1152	4	FSM	ENSG00000181896.12	ENST00000444249.6	1152	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	15.2970585407784	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCCAGTTGTTTTCGAA	19665521	True	NA	5	True	AATAAA	-18	NA	19668850	19680032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19668967_19677863_19677987_19678725_19678787_19679180
transcript_104292.known	chr19	+	4642	4	FSM	ENSG00000181896.12	ENST00000592502.2	4642	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	6.54896090146283	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTTCCCTTCTGTTCATT	19665509	True	NA	31	True	AATAAA	-20	NA	19668838	19683506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19668967_19677863_19677991_19678725_19678787_19679180
transcript_104295.known	chr19	-	2963	4	FSM	ENSG00000105708.9	ENST00000344099.4	2963	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	3.39934634239519	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTATAACATTTTTCTT	-19732036	True	NA	-29	True	AATAAA	-15	NA	19733112	19710471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19713090_19714090_19714152_19714360_19714488_19732955
transcript_104296.known	chr19	-	3323	4	FSM	ENSG00000081665.14	ENST00000540806.7	3323	4	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	13.9283882771841	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGTTCAGAGTAATAGTTT	-19819942	True	NA	NA	False	AATAAA	-16	NA	19821750	19792710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19795661_19806030_19806127_19806941_19807069_19821600
transcript_104297.known	chr19	-	1007	4	FSM	ENSG00000081665.14	ENST00000545006.1	1007	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	50.3388517946129	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTGTATCTTTGTGTCT	-19819914	True	NA	-9	True	AATAAA	-13	NA	19821722	19798788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19799451_19806030_19806127_19806941_19807069_19821600
transcript_104299.known	chr19	+	447	2	FSM	ENSG00000267419.3	ENST00000586924.2	709	2	238	24	188	-24	multi-exon	FALSE	canonical	3	12	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTAAAAAAAATCAGTGAGA	19776809	True	NA	NA	False	AATAAA	-4	NA	19776823	19786884	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19776995_19786608
transcript_10430.known	chr1	+	1332	12	FSM	ENSG00000117054.15	ENST00000420607.6	1332	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	146.908978397797	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCAGCTCCAGAAAAAAGAA	75720035	False	NA	NA	False	NA	NA	NA	75724779	75762809	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_75724818_75728388_75728489_75732643_75732742_75732852_75732923_75733527_75733629_75734790_75734872_75739979_75740111_75745805_75745915_75749418_75749560_75750450_75750547_75761121_75761371_75762691
transcript_104300.known	chr19	-	432	3	FSM	ENSG00000266904.7	ENST00000589508.1	432	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTTGAATCACTTTATAG	-19776204	True	NA	NA	False	AATACA	-24	NA	19776385	19761157	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_19761422_19762537_19762647_19776326
transcript_104302.known	chr19	+	3542	4	FSM	ENSG00000256771.5	ENST00000589717.2	3542	4	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_3	14.1656862405839	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGGGTTTCAGAGTAATG	19859265	True	NA	NA	False	GATAAA	-7	NA	19865881	19894674	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19866000_19878480_19878608_19880050_19880147_19891473
transcript_104306.known	chr19	+	820	3	FSM	ENSG00000256771.5	ENST00000592725.1	820	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	57.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAGAGAAACCCTACAAAT	19859269	True	NA	NA	False	NA	NA	NA	19865885	19892083	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19866000_19880050_19880147_19891473
transcript_104311.known	chr19	+	1334	4	FSM	ENSG00000184635.16	ENST00000592160.5	1334	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	123.777578296269	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTGCCATTTTGGTTT	19893195	True	NA	NA	False	NA	NA	NA	19900970	19932997	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19901092_19915279_19915407_19916559_19916656_19932007
transcript_104312.known	chr19	+	2763	4	FSM	ENSG00000184635.16	ENST00000343769.6	2763	4	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_1	24.4994331000173	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAATGTTGCTGTTTGTA	19893170	True	NA	NA	False	AATAAA	-20	NA	19900945	19935575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_19901092_19915279_19915407_19916559_19916656_19933181
transcript_104319.known	chr19	-	3244	4	FSM	ENSG00000197124.12	ENST00000397165.7	3244	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	10.9848380355227	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGTTGTGCATTGAATTA	-20036982	True	NA	-3	True	AATAAA	-23	NA	20039505	20004417	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_20007276_20023003_20023100_20024249_20024377_20039342
transcript_10432.known	chr1	+	2315	11	FSM	ENSG00000117054.15	ENST00000680805.1	2315	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	152.253866945966	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAAAGTTACCTGTTCA	75724151	False	NA	-69	True	AAAAAG	-19	NA	75724430	75763596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_75724818_75728400_75728489_75732643_75732742_75732852_75732923_75733527_75733629_75734790_75734872_75739979_75740111_75745805_75745915_75750450_75750547_75761121_75761371_75762691
transcript_10433.known	chr1	+	2351	11	FSM	ENSG00000117054.15	ENST00000681209.1	2351	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	203.094657733777	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAAAGTTACCTGTTCA	75724151	False	NA	-69	True	AAAAAG	-19	NA	75724430	75763596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_75724818_75728400_75728489_75732643_75732746_75732852_75732923_75733527_75733629_75734790_75734872_75739979_75740111_75749418_75749560_75750450_75750547_75761121_75761371_75762691
transcript_104336.known	chr19	-	618	2	FSM	ENSG00000267383.8	ENST00000585816.1	618	2	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	0	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACGCCACAAAGATACTC	-20217548	True	NA	NA	False	AATACA	-2	NA	20238431	20228009	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_20228484_20238287
transcript_10434.known	chr1	+	1451	11	FSM	ENSG00000117054.15	ENST00000526196.5	1451	11	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	137.499854545378	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATGTGTTTTCTTTA	75719961	True	NA	NA	False	NA	NA	NA	75724705	75762954	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_75724818_75732643_75732742_75732852_75732923_75733527_75733629_75734790_75734872_75739979_75740111_75745805_75745915_75749418_75749560_75750450_75750547_75761121_75761371_75762691
transcript_104343.known	chr19	+	1918	6	FSM	ENSG00000213988.11	ENST00000469078.5	1918	6	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	99.7236180651304	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATGTAAAAGCCTTCATT	20068775	True	NA	5	True	TATAAA	-5	NA	20077993	20127018	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_20078136_20104238_20104366_20105220_20105317_20121221_20121347_20125005_20126167_20126751
transcript_104348.nic	chr19	+	1838	5	NIC	ENSG00000213988.11	novel	1918	6	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_3	104.611184870453	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATGTAAAAGCCTTCATT	20068730	True	NA	5	True	TATAAA	-5	NA	20077948	20127018	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_20078136_20104238_20104366_20105220_20105317_20125005_20126167_20126751
transcript_104349.nic	chr19	+	1823	5	NIC	ENSG00000213988.11	novel	1918	6	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	70.5739860005087	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATGTAAAAGCCTTCATT	20068743	True	NA	5	True	TATAAA	-5	NA	20077961	20127018	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_20078136_20105220_20105317_20121221_20121347_20125005_20126167_20126751
transcript_104352.known	chr19	+	3744	4	FSM	ENSG00000213988.11	ENST00000418063.3	3744	4	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_3	93.4273336163816	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTAGATTGTGTGTGAAG	20068781	True	NA	6	True	AATAAA	-19	NA	20077999	20121165	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_20078136_20104238_20104366_20105220_20105317_20117780
transcript_104355.nnic	chr19	+	688	4	NIC	ENSG00000213988.11	novel	1918	6	NA	NA	-45	11	combination_of_known_splicesites	FALSE	canonical	3	57	junction_3	124.046586230962	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTCATTTCTCTGTCTTT	20068730	True	NA	16	True	TATAAA	-16	NA	20077948	20127029	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_20078136_20104238_20104366_20105220_20105317_20126751
transcript_104359.known	chr19	+	1724	4	FSM	ENSG00000213988.11	ENST00000474284.1	1724	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	79.5165950534157	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTTTTTGAAATTTCCT	20068775	True	NA	-10	True	NA	NA	NA	20077993	20127076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_20078136_20105220_20105317_20125005_20126167_20126751
transcript_104363.known	chr19	+	632	2	FSM	ENSG00000213988.11	ENST00000492328.1	632	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTACAACACTCTGAGCC	20068818	True	NA	NA	False	NA	NA	NA	20078036	20080319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_20078136_20079786
transcript_104364.known	chr19	+	734	4	FSM	ENSG00000256229.8	ENST00000597083.5	734	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	34.0326640482673	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCTCTCTCACCCTCGAC	20163531	True	NA	NA	False	ATTAAA	-17	NA	20167227	20188776	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_20167361_20184355_20184483_20185986_20186083_20188398
transcript_104366.known	chr19	+	3895	4	FSM	ENSG00000256229.8	ENST00000335117.9	3895	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	30.5068298363935	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGATTATGTGTGAATTT	20163517	True	NA	15	True	AATAAA	-21	NA	20167213	20200488	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_20167361_20184355_20184483_20185986_20186083_20196963
transcript_104375.known	chr19	-	1004	3	FSM	ENSG00000231205.12	ENST00000541160.6	1120	3	10	106	-1	-4	multi-exon	FALSE	canonical	3	43	junction_1	189	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTTTCAGTCTTTTTTT	-20417119	True	NA	-3	True	ATTAAA	-17	NA	20424959	20340367	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_20341102_20408949_20409046_20424785
transcript_104385.nic	chr19	-	933	3	FSM	ENSG00000231205.12	ENST00000691522.1	938	3	5	0	2	0	multi-exon	FALSE	canonical	3	72	junction_2	154.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGTCATTCTCGAATT	-20417120	True	NA	-1	True	AATATA	-18	NA	20424960	20405449	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_20406133_20408949_20409025_20424785
transcript_104386.known	chr19	-	1446	3	FSM	ENSG00000231205.12	ENST00000597334.2	1464	3	9	9	0	-4	multi-exon	FALSE	canonical	3	381	junction_1	20	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGAATATGTTGAAGAAT	-20424956	False	NA	-7	True	AATAAA	-17	NA	20424969	20404966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_20406133_20408949_20409046_20424785
transcript_104387.known	chr19	-	737	4	FSM	ENSG00000231205.12	ENST00000600513.5	737	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	177.059939631251	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGTGGCAAAGACTTTAA	-20417081	True	NA	NA	False	AAGAAA	-34	NA	20424921	20398657	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_20399039_20406008_20406133_20408949_20409046_20424785
transcript_104388.known	chr19	-	3330	3	FSM	ENSG00000231205.12	ENST00000615684.4	3330	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	35.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCATTAGATTATGTG	-20417116	True	NA	-12	True	AATAAA	-14	NA	20424956	20395954	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_20399039_20408949_20409025_20424785
transcript_104390.known	chr19	-	4404	5	NNC	ENSG00000188171.17	novel	6063	4	NA	NA	30	-1428	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	48.3754844936978	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGATCATGAGGTCAGGA	-20656141	True	NA	NA	False	NA	NA	NA	20661507	20621366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_20624365_20624531_20625651_20645683_20645780_20646278_20646406_20661443
transcript_104395.known	chr19	-	1123	4	FSM	ENSG00000188171.17	ENST00000291750.6	1123	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	26.5120517668642	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTCAATGGATTTATTT	-20656230	True	NA	NA	False	AATATA	-16	NA	20661596	20644701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_20645449_20645683_20645780_20646278_20646406_20661443
transcript_104398.known	chr19	+	757	4	FSM	ENSG00000160229.13	ENST00000594534.5	757	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	6.54896090146283	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGGAATATTTATAACATT	20773742	True	NA	NA	False	TATAAA	-1	NA	20776309	20799393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_20776451_20792511_20792639_20793782_20793879_20799000
transcript_104399.known	chr19	+	4539	4	FSM	ENSG00000160229.13	ENST00000344519.10	4539	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	6.94422221866655	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAATGGAAAACAAACAAAA	20773736	True	NA	NA	False	AATAAA	-24	NA	20776303	20809995	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_20776451_20792511_20792639_20793782_20793879_20805826
transcript_104401.known	chr19	+	2333	4	FSM	ENSG00000105750.15	ENST00000328178.13	2333	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	8.65383665716478	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTGTCAAAAGCATTCAG	NA	False	NA	14	True	AATAAA	-17	NA	20923250	20950697	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_20923404_20934023_20934151_20934948_20935048_20948743
transcript_104403.known	chr19	+	3886	5	FSM	ENSG00000118620.13	ENST00000261560.10	3886	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	5.7662812973354	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGGTTATGTGTGGTTA	21020118	True	NA	6	True	AATAAA	-20	NA	21020656	21060050	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_21020804_21022788_21022882_21033455_21033583_21034085_21034185_21056630
transcript_104404.nic	chr19	+	2338	5	NIC	ENSG00000118620.13	novel	3886	5	NA	NA	-22	14	intron_retention	FALSE	canonical	3	22	junction_3	9.54921462739214	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAATTCATACTGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	21020611	21058460	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_21020804_21022788_21022882_21033455_21033583_21034088_21034185_21056630
transcript_104413.known	chr19	+	8752	5	FSM	ENSG00000160352.16	ENST00000456283.7	8752	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	26.9953699733862	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGCTGGGCATGGGCAT	21074413	True	NA	NA	False	NA	NA	NA	21082202	21125094	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_21082349_21083977_21084070_21098184_21098312_21098811_21098911_21116806
transcript_104414.known	chr19	+	2066	5	FSM	ENSG00000160352.16	ENST00000620627.1	2066	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	26.9953699733862	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCATACTGGAACGAAACC	21074460	True	NA	NA	False	AAAAAG	-9	NA	21082249	21118477	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_21082349_21083977_21084070_21098184_21098312_21098811_21098911_21116828
transcript_104415.nic	chr19	+	2168	5	NIC	ENSG00000160352.16	novel	2562	6	NA	NA	-6	1	combination_of_known_junctions	FALSE	canonical	3	36	junction_4	26.4799452416352	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATACTGGAACGAAACCC	21074378	True	NA	NA	False	AAAAAG	-10	NA	21082167	21118478	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_21082349_21083977_21084070_21098184_21098312_21098814_21098911_21116806
transcript_104419.known	chr19	+	647	4	FSM	ENSG00000160352.16	ENST00000618008.4	647	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	15.121728296285	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAGAAACCTTTCAAATG	21074413	True	NA	NA	False	CATAAA	-37	NA	21082202	21117084	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_21082349_21098184_21098312_21098814_21098911_21116806
transcript_104421.nic	chr19	+	1121	3	NIC	ENSG00000160352.16	novel	898	2	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	41.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACAGTGTTTTGCTGAGTT	21074378	True	NA	5	True	AATAAA	-14	NA	21082167	21091758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_21082349_21083977_21084070_21090910
transcript_104426.nic	chr19	+	949	2	ISM	ENSG00000160352.16	ENST00000618008.4	647	4	-13	18110	-9	7216	intron_retention	FALSE	canonical	3	16	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGCCGGCCCTTACAATG	21074400	True	NA	NA	False	NA	NA	NA	21082189	21098974	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_21082349_21098184
transcript_104427.known	chr19	+	2671	6	FSM	ENSG00000160352.16	ENST00000610902.4	2671	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	24.2123935206745	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGCTGGGCATGGGCAT	21074419	True	NA	NA	False	NA	NA	NA	21082208	21125094	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_21082349_21083977_21084070_21098184_21098312_21098811_21098911_21116806_21118886_21124960
transcript_10443.known	chr1	+	1448	9	FSM	ENSG00000137955.16	ENST00000319942.8	1448	9	0	0	0	0	multi-exon	TRUE	canonical	1	208	junction_8	132.643083121586	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATAGGTTTGAATATGGT	75777593	True	NA	31	True	AATAAA	-24	NA	75786255	75795086	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_75786275_75787496_75787605_75789158_75789357_75789951_75790058_75791284_75791338_75791460_75791572_75792180_75792307_75794083_75794234_75794509
transcript_104434.known	chr19	-	4004	4	FSM	ENSG00000182141.10	ENST00000356929.3	4004	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	8.05536398239638	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATGTGTGAACTTGTTT	-21324725	True	NA	1	True	AATAAA	-25	NA	21329410	21291159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_21294740_21309245_21309342_21310500_21310628_21329209
transcript_104435.known	chr19	-	567	3	FSM	ENSG00000182141.10	ENST00000601295.1	567	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	6	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTGGAGAAAAACCCTACAA	-21324651	True	NA	NA	False	NA	NA	NA	21329336	21294395	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_21294740_21309245_21309342_21329209
transcript_104436.known	chr19	+	2442	5	FSM	ENSG00000172687.14	ENST00000311015.7	2442	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_4	51.5333629797241	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAATGTTACCTGTC	21350230	True	NA	6	True	ATTAAA	-10	NA	21358929	21379300	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_21359144_21361765_21361859_21375237_21375365_21375868_21375965_21377388
transcript_104438.known	chr19	+	1142	5	FSM	ENSG00000172687.14	ENST00000380870.8	1142	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_4	68.9891295785068	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATGTTACCTGTCCC	21350292	True	NA	8	True	ATTAAA	-12	NA	21358991	21379302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_21359144_21361765_21361859_21375237_21375365_21375868_21375965_21378628
transcript_104439.known	chr19	+	6177	5	FSM	ENSG00000172687.14	ENST00000683779.1	6177	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	86.1365195489114	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGTGTGAAGTTAATG	21350300	True	NA	10	True	AATAAA	-25	NA	21358999	21388582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_21359144_21361765_21361859_21375237_21375365_21375868_21375965_21382865
transcript_104445.known	chr19	+	1021	5	FSM	ENSG00000172687.14	ENST00000597492.1	1021	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	112.353237603551	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATCTTTTTTTATTAGTA	21350321	True	NA	NA	False	NA	NA	NA	21359020	21376424	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_21359144_21360474_21360597_21361765_21361859_21375237_21375365_21375868
transcript_104446.nic	chr19	+	566	4	ISM	ENSG00000172687.14	ENST00000597810.5	747	5	-53	2282	28	-396	5prime_fragment	FALSE	canonical	3	210	junction_1	12.5521135891752	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCCCTATAATGTGATT	21350258	True	NA	NA	False	AAAACA	-43	NA	21358957	21376028	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_21359144_21361765_21361859_21375237_21375365_21375868
transcript_104450.known	chr19	-	967	5	FSM	ENSG00000268119.7	ENST00000600469.7	1443	5	31	445	11	-288	multi-exon	FALSE	canonical	2	11	junction_1	54.6145584986275	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGTTATTATGCCACAAAC	-21460108	True	NA	NA	False	NA	NA	NA	21463873	21452888	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_21453280_21453549_21453778_21454382_21454473_21456460_21456589_21463743
transcript_104452.known	chr19	+	1536	4	FSM	ENSG00000196268.12	ENST00000594390.5	1536	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	9.53356643071673	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACGTGTGAAGAATCAGAA	21395230	True	NA	51	True	AATAAA	-15	NA	21397132	21414643	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_21397268_21405128_21405256_21405760_21405857_21413465
transcript_104453.known	chr19	+	4785	4	FSM	ENSG00000197013.11	ENST00000358491.9	4785	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	11.5181016954473	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATATTTTCAATTATTTG	21504700	True	NA	6	True	AATAAA	-20	NA	21505601	21540668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_21505775_21529657_21529785_21530588_21530685_21536279
transcript_104454.known	chr19	-	566	4	FSM	ENSG00000268119.7	ENST00000596705.5	566	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	63.1259763400843	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCCAGCTCCTGACCGCG	-21460143	True	NA	NA	False	NA	NA	NA	21463908	21444240	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_21444424_21454382_21454473_21456460_21456589_21463743
transcript_104458.nnic	chr19	-	2001	4	NNC	ENSG00000268119.7	novel	566	4	NA	NA	-36	1266	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	64.0624695121879	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGTAAAATAGAGCTCTTG	-21460179	True	NA	NA	False	AATAAA	-25	NA	21463944	21442974	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_21444557_21454382_21454473_21456460_21456589_21463743
transcript_104464.nnic	chr19	-	643	4	NNC	ENSG00000268119.7	novel	1916	5	NA	NA	-36	-752	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	61.2535713244542	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGCAGAAATCAAAGGCAG	-21460179	True	NA	NA	False	AAGAAA	-16	NA	21463944	21448802	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_21449027_21454382_21454473_21456460_21456589_21463743
transcript_104465.nnic	chr19	-	994	4	NIC	ENSG00000268119.7	novel	1916	5	NA	NA	-36	-752	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	56.5763986914057	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGCAGAAATCAAAGGCAG	-21460179	True	NA	NA	False	AAGAAA	-16	NA	21463944	21448802	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_21449378_21454382_21454473_21456460_21456589_21463743
transcript_104466.known	chr19	-	1581	4	FSM	ENSG00000268119.7	ENST00000599993.7	1736	4	12	143	1	33	multi-exon	FALSE	canonical	3	67	junction_1	35.1883819210577	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCTATGTTTTATAATCC	-21460131	True	NA	NA	False	NA	NA	NA	21463896	21452567	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_21453778_21454382_21454473_21456460_21456589_21463743
transcript_104468.known	chr19	-	803	3	FSM	ENSG00000268119.7	ENST00000663704.1	803	3	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	9	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGTCATTCAACTCTGAA	-21460123	True	NA	NA	False	AATACA	-22	NA	21463888	21453942	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_21454473_21456460_21456589_21463743
transcript_104471.known	chr19	+	538	2	FSM	ENSG00000197013.11	ENST00000597556.1	538	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGTCTAATGAATATTAA	21504797	True	NA	18	True	AATAAA	-31	NA	21505698	21507675	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_21506081_21507519
transcript_104472.known	chr19	+	1769	1	FSM	ENSG00000196268.12	ENST00000599461.1	1769	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GACAAACAACAAGAACAAAA	21395263	True	NA	NA	False	AAAAAG	-37	NA	21397165	21398934	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_21397200_21398900
transcript_104473.known	chr19	+	375	3	FSM	ENSG00000197013.11	ENST00000598747.1	375	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTCTGCAAGACTGTCTA	21504739	True	NA	7	True	AATAAA	-20	NA	21505640	21507664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_21505775_21505984_21506081_21507519
transcript_104475.known	chr19	-	5691	5	FSM	ENSG00000197020.12	ENST00000358296.11	5691	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	13.1220234720107	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATAATTTTTTTTTTTC	NA	False	NA	NA	False	AATAAA	-5	NA	21767579	21722770	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_21727990_21744016_21744116_21744940_21745068_21765693_21765787_21767426
transcript_104483.known	chr19	-	5235	4	FSM	ENSG00000198521.12	ENST00000354959.9	5235	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_3	31.0161248385416	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTATATATTTTTCTT	-21832779	True	NA	NA	False	AATAAA	-29	NA	21836182	21804945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_21809808_21817887_21817987_21819094_21819222_21836035
transcript_104487.known	chr19	-	5249	4	FSM	ENSG00000198521.12	ENST00000357491.10	5249	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	58.0708379672812	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTGGTATATATTTTT	-21849430	True	NA	NA	False	AATAAA	-26	NA	21852068	21804948	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_21809808_21817887_21817987_21819094_21819222_21851904
transcript_104496.known	chr19	+	581	4	FSM	ENSG00000267886.1	ENST00000594318.1	581	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	5.71547606649408	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCCTCAGAAGCCGTGG	23071089	True	NA	NA	False	NA	NA	NA	23075200	23095616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_23075388_23095011_23095155_23095262_23095441_23095543
transcript_104497.known	chr19	+	563	3	FSM	ENSG00000267886.1	ENST00000600223.1	563	3	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_1	9	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGCTTAGGAAAATGAGGAA	23071099	True	NA	NA	False	AATAGA	-20	NA	23075210	23100361	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_23075388_23098339_23098414_23100049
transcript_104499.known	chr19	+	464	3	FSM	ENSG00000183850.14	ENST00000593635.1	464	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	29	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCAGTTTTTAAAATAAT	23071098	True	NA	NA	False	AATACA	-45	NA	23075209	23136106	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_23075388_23134079_23134207_23135947
transcript_104501.known	chr19	-	583	5	FSM	ENSG00000196081.10	ENST00000597537.1	583	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	19.5831560275661	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGGACATCACAATTTACA	-23240457	True	NA	-17	True	CATAAA	-41	NA	23250388	23223929	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_23224019_23231265_23231362_23232166_23232294_23242588_23242711_23250239
transcript_104503.known	chr19	-	556	5	FSM	ENSG00000284428.1	ENST00000639752.1	556	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	13.0838641081295	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTGTACAAAAGTCATAAA	-23272040	True	NA	-46	True	NA	NA	NA	23274244	23260000	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_23260117_23260863_23260935_23261619_23261745_23270217_23270293_23274075
transcript_104505.known	chr19	-	2798	4	FSM	ENSG00000196081.10	ENST00000418100.6	2798	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	11.4697670227235	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAAAAAAACTAAT	-23240463	True	NA	NA	False	NA	NA	NA	23250394	23221598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_23224019_23231265_23231362_23232166_23232294_23250239
transcript_104510.known	chr19	-	583	4	FSM	ENSG00000284428.1	ENST00000640838.1	583	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	7.48331477354788	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATTGTGTTTGTCCTATG	-23272047	True	NA	49	True	NA	NA	NA	23274251	23259905	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_23260117_23260863_23260935_23261619_23261745_23274075
transcript_104511.known	chr19	-	561	4	FSM	ENSG00000284428.1	ENST00000640517.1	561	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	15.1070255914995	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTTTGTTTTCTTTG	-23272028	True	NA	NA	False	NA	NA	NA	23274232	23260730	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_23260935_23261619_23261745_23270217_23270293_23274075
transcript_104513.known	chr19	-	574	3	FSM	ENSG00000284428.1	ENST00000638822.1	574	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	9	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACCGCAACCTCCGCCT	-23272044	True	NA	NA	False	NA	NA	NA	23274248	23260658	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_23260935_23261619_23261745_23274075
transcript_104515.known	chr19	-	579	2	FSM	ENSG00000284428.1	ENST00000638919.1	579	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTCCCATCCCAGTAAG	-23272043	True	NA	2	True	AATAAA	-19	NA	23274247	23269885	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_23270293_23274075
transcript_104516.known	chr19	-	5400	4	FSM	ENSG00000167232.14	ENST00000300619.12	5400	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	4.49691252107735	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCTGAGTCCCGAATAA	-23391188	True	NA	-8	True	AATAAA	-31	NA	23395471	23357695	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_23362726_23373741_23373838_23374637_23374765_23395324
transcript_104532.nnic	chr19	-	761	7	NNC	ENSG00000269416.7	novel	798	6	NA	NA	0	-79	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_3	33.9104212103988	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTACTAACAAGACCCAGC	-23411606	True	NA	NA	False	AAAAAG	-8	NA	23416047	23403358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_23403510_23403719_23403748_23404476_23404563_23404740_23404847_23404950_23405109_23405257_23405336_23415893
transcript_10454.nic	chr1	+	754	6	ISM	ENSG00000117054.15	ENST00000680964.1	3789	12	28	28658	28	-266	5prime_fragment	FALSE	canonical	3	419	junction_2	40.102867727882	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGTATTTGGGGAGAA	75724179	False	NA	17	True	NA	NA	NA	75724458	75734828	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_75724818_75728400_75728489_75732643_75732742_75732852_75732923_75733527_75733629_75734790
transcript_104547.known	chr19	-	2387	5	FSM	ENSG00000269416.7	ENST00000600643.5	2387	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	35.8364339743786	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATACATGTTGGCGTGGCT	-23411630	True	NA	NA	False	ATTAAA	-12	NA	23416071	23399232	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_23401048_23403205_23403494_23403719_23403748_23405257_23405336_23415893
transcript_104550.nic	chr19	-	608	5	NIC	ENSG00000269416.7	novel	798	6	NA	NA	-27	-79	combination_of_known_junctions	FALSE	canonical	3	51	junction_2	33.3691474269272	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTACTAACAAGACCCAGC	NA	False	NA	NA	False	AAAAAG	-8	NA	23416102	23403358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_23403494_23403719_23403748_23404950_23405109_23405257_23405336_23415893
transcript_104551.nic	chr19	-	569	5	ISM	ENSG00000269416.7	ENST00000593573.5	798	6	12	2375	0	-79	5prime_fragment	FALSE	canonical	3	51	junction_2	27.6710588883042	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTACTAACAAGACCCAGC	-23411606	True	NA	NA	False	AAAAAG	-8	NA	23416047	23403358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_23403510_23403719_23403748_23404950_23405109_23405257_23405336_23415893
transcript_104554.known	chr19	-	559	4	FSM	ENSG00000269416.7	ENST00000601293.5	559	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	48.5546656414763	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGCCCACAAATAGGATTGT	-23411634	True	NA	NA	False	NA	NA	NA	23416075	23400986	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_23401048_23403205_23403494_23403719_23403748_23415893
transcript_104557.known	chr19	-	559	4	FSM	ENSG00000269416.7	ENST00000601338.5	559	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	41.555852643026	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAGGTGAGTTGGTGACA	-23411633	True	NA	NA	False	NA	NA	NA	23416074	23403211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_23403494_23403719_23403748_23405257_23405336_23415903
transcript_104558.nic	chr19	-	411	4	NIC	ENSG00000269416.7	novel	798	6	NA	NA	0	-79	combination_of_known_junctions	FALSE	canonical	3	46	junction_2	16.1107279647928	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTACTAACAAGACCCAGC	-23411606	True	NA	NA	False	AAAAAG	-8	NA	23416047	23403358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_23403510_23403719_23403748_23405257_23405336_23415893
transcript_104560.nnic	chr19	-	345	3	NIC	ENSG00000269416.7	novel	559	4	NA	NA	-10	-79	combination_of_known_splicesites	FALSE	canonical	3	13	junction_2	59	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTACTAACAAGACCCAGC	-23411644	True	NA	NA	False	AAAAAG	-8	NA	23416085	23403358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_23403494_23403719_23403748_23415903
transcript_104561.nnic	chr19	-	361	3	NIC	ENSG00000269416.7	novel	559	4	NA	NA	-10	-79	combination_of_known_splicesites	FALSE	canonical	3	13	junction_2	32.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTACTAACAAGACCCAGC	-23411644	True	NA	NA	False	AAAAAG	-8	NA	23416085	23403358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_23403510_23403719_23403748_23415903
transcript_104562.known	chr19	-	470	3	FSM	ENSG00000269416.7	ENST00000594576.5	470	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	18	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTTCTGAATCTCACACA	-23411624	True	NA	NA	False	NA	NA	NA	23416065	23403279	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_23403510_23405257_23405336_23415903
transcript_104564.known	chr19	-	572	3	FSM	ENSG00000269416.7	ENST00000598922.1	572	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	56	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTGCTGGGCCCAGCAA	-23411624	True	NA	NA	False	NA	NA	NA	23416065	23402416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_23402513_23403205_23403510_23415893
transcript_104565.known	chr19	-	485	4	FSM	ENSG00000269416.7	ENST00000596763.1	485	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	34.3446583263767	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATCCCAGGTGATGTGA	-23411606	True	NA	NA	False	NA	NA	NA	23416047	23404751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_23404847_23404950_23405109_23405257_23405336_23415893
transcript_104566.known	chr19	-	2311	4	FSM	ENSG00000197372.10	ENST00000359788.9	2311	4	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_3	13.0213499897497	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATCATAAAGCTTATCAT	-23683101	True	NA	96	True	CATAAA	-22	NA	23687212	23652800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_23654707_23662113_23662210_23663031_23663159_23687030
transcript_10457.known	chr1	+	3199	9	FSM	ENSG00000117054.15	ENST00000681616.1	3199	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	212.06186449949	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCTTATTATCATATCTT	75719954	True	NA	3	True	AATAAA	-8	NA	75724698	75763483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_75724818_75732643_75732742_75732852_75732923_75733527_75733629_75734790_75734872_75739979_75740111_75749418_75749560_75750450_75750547_75761121
transcript_104572.known	chr19	-	6497	4	FSM	ENSG00000196172.9	ENST00000402377.3	6497	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	4.02768199119819	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTATTCCATTGTGTATAT	-23756055	True	NA	-4	True	AATAAA	-22	NA	23758891	23739194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_23745324_23754822_23754919_23755424_23755552_23758746
transcript_104575.known	chr19	-	628	3	FSM	ENSG00000196172.9	ENST00000528059.1	628	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	8.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAAATCGTACATATGT	-23756004	True	NA	NA	False	CATAAA	-14	NA	23758840	23744885	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_23745324_23754822_23754919_23758746
transcript_10458.known	chr1	+	2137	10	FSM	ENSG00000137955.16	ENST00000471759.5	2137	10	0	0	0	0	multi-exon	FALSE	canonical	1	163	junction_3	166.116722313254	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGACCGGTATTTTATTT	75786671	True	NA	12	True	AATAAA	-26	NA	75786700	75794803	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_75787605_75789158_75789357_75789951_75790058_75790151_75790275_75790445_75790518_75791284_75791338_75791460_75791572_75792180_75792307_75794083_75794234_75794509
transcript_104583.nnic	chr19	+	3611	6	NNC	ENSG00000288920.1	novel	2140	4	NA	NA	0	252350	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	131.061817475571	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATAATTGTATTGCTTTGT	23752660	True	NA	NA	False	ATTAAA	-9	NA	23763003	24123512	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_23763135_23807825_23807940_23808718_23808815_23827069_23828502_23963668_23965134_24123139
transcript_104589.nnic	chr19	+	3291	5	NNC	ENSG00000288920.1	novel	2140	4	NA	NA	0	93971	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	129.692906513811	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACTCTTGAAAAGAAAACC	23752607	True	NA	NA	False	ATTAAA	-11	NA	23762950	23965133	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_23763135_23807825_23807940_23808718_23808815_23827069_23828502_23963668
transcript_10459.known	chr1	+	5547	5	FSM	ENSG00000117069.15	ENST00000477717.6	5547	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	9.40744386111339	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGACCCACTGGATTAGT	76866528	True	NA	NA	False	AATAAA	-28	NA	76867479	77067546	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_76867691_76868496_76868743_77044203_77044614_77050257_77050366_77062974
transcript_104594.nnic	chr19	+	1460	4	FSM	ENSG00000288920.1	ENST00000484897.4	2140	4	-53	733	0	-733	multi-exon	FALSE	canonical	3	49	junction_3	109.958578059599	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGCAATAATTATGAGTC	23752607	True	NA	6	True	AATAAA	-32	NA	23762950	23828135	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_23763135_23807825_23807940_23808718_23808815_23827069
transcript_104595.known	chr19	+	1001	4	FSM	ENSG00000288920.1	ENST00000471224.5	1001	4	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_3	44.2894519672072	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATGCACAGAAGAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	23762943	23832196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_23763135_23807825_23807940_23808718_23808815_23831596
transcript_104600.nic	chr19	+	1095	3	ISM	ENSG00000288920.1	ENST00000484897.4	2140	4	-53	19353	0	0	5prime_fragment	FALSE	canonical	3	264	junction_2	16.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCCTCTAATTTTTT	23752607	True	NA	8	True	AATAAA	-16	NA	23762950	23809515	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_23763135_23807825_23807940_23808718
transcript_104603.known	chr19	+	723	2	ISM	ENSG00000288920.1	ENST00000687994.1	4132	4	8	38494	1	0	5prime_fragment	FALSE	canonical	1	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATGCACAGAAGAAAGAAAC	23752668	True	NA	NA	False	NA	NA	NA	23763011	23832196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_23763135_23831596
transcript_104604.known	chr19	+	888	1	ISM	ENSG00000288920.1	ENST00000484897.4	2140	4	64158	819	45081	-819	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTCTTGCATAGGCTCT	23827122	False	NA	-80	True	NA	NA	NA	23827161	23828049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_23827200_23828000
transcript_104615.known	chr19	+	4089	4	FSM	ENSG00000213096.11	ENST00000357002.5	4089	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	44.4996878890428	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGAGTAAGTATGTTTG	24084360	True	NA	9	True	AATAAA	-1	NA	24087186	24129968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_24087338_24105939_24106067_24106547_24106644_24126253
transcript_104617.known	chr19	+	3982	3	FSM	ENSG00000213096.11	ENST00000611359.3	3982	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	68.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAATTATGGAGTAAGT	24084333	True	NA	2	True	ATTAAA	-34	NA	24087159	24129961	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_24087338_24106547_24106644_24126253
transcript_104619.known	chr19	+	819	2	FSM	ENSG00000268362.6	ENST00000664197.1	819	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAAGCATTTACTTTAG	24028688	True	NA	23	True	AATAAA	-20	NA	24033452	24037395	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_24033622_24036745
transcript_10462.known	chr1	+	573	3	FSM	ENSG00000117069.15	ENST00000480428.1	573	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	19	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAGTTACAGATATTATT	76866528	True	NA	NA	False	NA	NA	NA	76867479	76871383	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_76867691_76868496_76868743_76871267
transcript_104620.known	chr19	+	1103	5	FSM	ENSG00000268362.6	ENST00000663903.1	1103	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	34.4746283518764	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTTGGGTTCAACACCT	24028732	True	NA	NA	False	AATATA	-21	NA	24033496	24065830	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_24033622_24046183_24046280_24049404_24049549_24057930_24058301_24065462
transcript_104621.known	chr19	+	511	4	FSM	ENSG00000213096.11	ENST00000339642.10	511	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	55.6796392070048	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTAGTGTCCTCTCTAAT	24084357	True	NA	12	True	AATAAA	-13	NA	24087183	24107349	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_24087338_24105939_24106067_24106547_24106644_24107215
transcript_104622.known	chr19	-	1131	5	FSM	ENSG00000261824.8	ENST00000655166.2	1132	5	1	0	0	0	multi-exon	TRUE	canonical	2	5	junction_1	18.6882315910308	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGTGTTGTGTGGACT	-27793804	True	NA	-4	True	AATAAA	-27	NA	27793900	27721701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_27721816_27732795_27732968_27746097_27746341_27792999_27793233_27793531
transcript_104623.known	chr19	-	3429	5	FSM	ENSG00000261824.8	ENST00000657659.2	3517	5	88	0	8	0	multi-exon	FALSE	canonical	3	16	junction_4	13.3486890742125	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAACTACTTATGAA	-27793738	False	NA	NA	False	AATAAA	-12	NA	27793834	27728229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_27730708_27732795_27732968_27746097_27746341_27792999_27793233_27793531
transcript_104625.known	chr19	-	3111	4	FSM	ENSG00000261824.8	ENST00000663775.1	3111	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	22.2261107708929	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACACATAGGCTTAAAATAAA	-27793282	False	NA	NA	False	NA	NA	NA	27793378	27699328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_27701646_27732795_27732968_27746097_27746341_27792999
transcript_104627.known	chr19	-	3731	4	FSM	ENSG00000261824.8	ENST00000661680.2	4262	4	531	0	-3	0	multi-exon	TRUE	canonical	3	28	junction_1	9.46337971105226	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTG	-27793295	False	NA	NA	False	NA	NA	NA	27793391	27727783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_27730708_27732795_27732968_27746097_27746341_27792999
transcript_104628.known	chr19	+	1631	4	FSM	ENSG00000267575.8	ENST00000653426.1	1631	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.74165738677394	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGATGTGTTGGCTTGTAA	27792995	True	NA	NA	False	AATAAA	-21	NA	27793442	27806782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_27793610_27797753_27798177_27805604_27806186_27806322
transcript_104629.known	chr19	+	1824	3	FSM	ENSG00000267575.8	ENST00000585917.6	1824	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTTGGCTTGTAATTT	NA	False	NA	NA	False	AATAAA	-24	NA	27793430	27806785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_27793651_27797753_27798177_27805604
transcript_104631.known	chr19	+	1829	3	FSM	ENSG00000267575.8	ENST00000669503.1	1829	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGATGTGTTGGCTTGTAA	27793447	False	NA	NA	False	AATAAA	-21	NA	27793894	27806782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_27794123_27797753_27798177_27805604
transcript_104633.known	chr19	+	1335	2	FSM	ENSG00000267575.8	ENST00000590628.1	1335	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGATGTGTTGGCTTGTAA	27793046	False	NA	NA	False	AATAAA	-21	NA	27793493	27806782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_27793651_27805604
transcript_104634.known	chr19	+	2135	3	FSM	ENSG00000267575.8	ENST00000655543.1	2135	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	4.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTCTGGAAAACACATTCT	27793000	True	NA	NA	False	TATAAA	-37	NA	27793447	27824767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_27793651_27797753_27798177_27823258
transcript_104635.known	chr19	+	656	2	FSM	ENSG00000267575.8	ENST00000586784.1	656	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGCAAAAAAAAAAAAAAAAA	27793035	True	NA	NA	False	NA	NA	NA	27793482	27798282	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_27793610_27797753
transcript_10464.known	chr1	+	787	2	FSM	ENSG00000117069.15	ENST00000496845.1	787	2	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGAGTCGCTGCCTGGTGGG	76866530	True	NA	NA	False	NA	NA	NA	76867481	76869074	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_76867691_76868496
transcript_104647.nnic	chr19	-	1102	3	NNC	ENSG00000169021.6	novel	3086	2	NA	NA	-23	-1950	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2031	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACTTGTGAAATCTGTAA	-29180427	True	NA	-18	True	ATTAAA	-21	NA	29213174	29207269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_29208159_29212904_29213009_29213065
transcript_104648.nnic	chr19	-	984	3	NNC	ENSG00000169021.6	novel	3086	2	NA	NA	-23	-2068	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2031	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTCAGGCATTCACTTA	-29180427	True	NA	-81	True	AATAAA	-18	NA	29213174	29207387	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_29208159_29212904_29213009_29213065
transcript_104649.known	chr19	-	3086	2	FSM	ENSG00000169021.6	ENST00000304863.6	3086	2	0	0	0	0	multi-exon	FALSE	canonical	3	4062	junction_1	0	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGTCGTTTGAATTT	-29180404	True	NA	NA	False	ACTAAA	-15	NA	29213151	29205319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_29208159_29212904
transcript_104657.known	chr19	+	1488	5	FSM	ENSG00000187135.8	ENST00000335523.8	2065	5	505	72	505	-72	multi-exon	FALSE	canonical	2	10	junction_1	2.27760839478607	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAGACACTTGTTTATAAA	29526419	False	NA	NA	False	AATAAA	-14	NA	29526498	29564479	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_29526666_29527210_29527396_29528432_29528463_29529818_29530291_29563845
transcript_104665.known	chr19	+	846	7	FSM	ENSG00000105171.10	ENST00000591824.5	846	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	108.736301819279	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTTAAGCCAATTCCATT	29599629	True	NA	NA	False	NA	NA	NA	29606302	29615458	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_29606326_29608656_29608710_29610319_29610633_29611861_29611940_29612116_29612179_29613870_29613973_29615243
transcript_104667.known	chr19	+	2556	7	FSM	ENSG00000105171.10	ENST00000585603.6	2556	7	0	0	0	0	multi-exon	TRUE	canonical	3	193	junction_1	42.8229559413588	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTAGGTACCACTTGCCA	29599609	True	NA	12	True	AATACA	-19	NA	29606282	29617237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_29606326_29608656_29608710_29610408_29610633_29611861_29611940_29612116_29612179_29613870_29613973_29615243
transcript_104673.known	chr19	+	2321	6	FSM	ENSG00000105171.10	ENST00000221770.7	2321	6	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_2	106.562657624517	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTAGGTACCACTTGCCA	29599620	True	NA	12	True	AATACA	-19	NA	29606293	29617237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_29606326_29608656_29608710_29611861_29611940_29612116_29612179_29613870_29613973_29615243
transcript_104679.nnic	chr19	+	2069	3	NNC	ENSG00000166289.6	novel	1699	2	NA	NA	-81	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGAGTGTCCTTGCTTC	NA	False	NA	29	True	AATAAA	-36	NA	29665377	29675477	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_29665506_29666893_29667181_29673823
transcript_10468.known	chr1	-	4601	11	FSM	ENSG00000142892.15	ENST00000370812.8	4601	11	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_6	27.0916961447599	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGAAAGGTGGCAGTGTC	-77216175	True	NA	-5	True	ATTAAA	-18	NA	77219430	77088988	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_77092491_77122274_77122360_77154448_77154622_77161294_77161406_77161593_77161712_77163845_77163943_77166718_77166831_77169259_77169396_77206639_77206732_77210435_77210490_77219309
transcript_104683.nnic	chr19	+	2305	3	NNC	ENSG00000166289.6	novel	1699	2	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGAGTGTCCTTGCTTC	29663297	True	NA	29	True	AATAAA	-36	NA	29665434	29675477	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_29665796_29666890_29667181_29673823
transcript_104684.known	chr19	+	1699	2	FSM	ENSG00000166289.6	ENST00000436066.4	1699	2	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGAGTGTCCTTGCTTC	29663323	True	NA	29	True	AATAAA	-36	NA	29665460	29675477	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_29665506_29673823
transcript_104685.known	chr19	+	543	2	FSM	ENSG00000166289.6	ENST00000588833.1	543	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAGGTCACACTGGAGCT	29663363	True	NA	NA	False	NA	NA	NA	29665500	29674085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_29665782_29673823
transcript_104692.known	chr19	-	578	4	FSM	ENSG00000131943.20	ENST00000342680.5	578	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	33.0386978489703	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGGACGGACGCCGTGC	-29714315	True	NA	NA	False	NA	NA	NA	29715275	29702841	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_29702978_29705273_29705395_29708253_29708424_29715124
transcript_104695.known	chr19	-	4265	3	FSM	ENSG00000131943.20	ENST00000623113.3	3726	3	0	-539	0	-100	multi-exon	FALSE	canonical	3	6	junction_2	34.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGCCTGGTGTGAATT	-29714100	False	NA	NA	False	NA	NA	NA	29715060	29699036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_29702978_29708253_29708424_29714906
transcript_104696.known	chr19	-	4348	3	FSM	ENSG00000131943.20	ENST00000323670.14	4348	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	1	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTTTGGGATTCATT	-29714301	True	NA	NA	False	NA	NA	NA	29715261	29698936	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_29702978_29708253_29708424_29715124
transcript_104697.known	chr19	-	1912	2	FSM	ENSG00000131943.20	ENST00000392276.1	1912	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTTTCCCACATATTAT	-29714261	True	NA	-15	True	AATAAA	-15	NA	29715221	29701162	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_29702978_29715124
transcript_104698.known	chr19	-	1188	2	FSM	ENSG00000131943.20	ENST00000392275.1	1188	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCTTCTCATCTTGGGAG	NA	False	NA	NA	False	NA	NA	NA	29715457	29702340	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_29702978_29714906
transcript_104700.known	chr19	+	1954	12	FSM	ENSG00000105173.14	ENST00000262643.8	1954	12	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	50.9559848957334	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTTTATGAGCTATGT	29809437	True	NA	20	True	AATAAA	-22	NA	29811990	29824312	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_29812153_29812531_29812579_29812688_29812777_29812968_29813038_29817136_29817283_29817405_29817542_29820701_29820849_29821721_29821818_29821995_29822131_29822239_29822352_29822445_29822604_29823654
transcript_104701.nic	chr19	+	1943	11	NIC	ENSG00000105173.14	novel	1954	12	NA	NA	-128	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_8	100.746414328253	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGCTGGTTTTATGAGCT	29809309	True	NA	16	True	AATAAA	-18	NA	29811862	29824308	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_29812153_29812531_29812579_29812688_29812777_29812968_29813038_29817136_29817283_29817405_29817542_29820701_29820849_29821721_29821818_29822239_29822352_29822445_29822604_29823654
transcript_104705.nnic	chr19	+	2021	11	NIC	ENSG00000105173.14	novel	1954	12	NA	NA	-118	0	combination_of_known_splicesites	FALSE	canonical	3	64	junction_1	90.9013201224273	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGCTGGTTTTATGAGCT	29809319	True	NA	16	True	AATAAA	-18	NA	29811872	29824308	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_29812153_29812688_29812777_29812968_29813038_29817136_29817283_29817405_29817542_29820701_29820849_29821721_29821818_29821995_29822131_29822239_29822352_29822445_29822604_29823654
transcript_104712.nnic	chr19	+	2464	12	NNC	ENSG00000105176.18	novel	3460	11	NA	NA	-28	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	143.437549402213	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGTTGTGAACTTTAT	29935600	True	NA	32	True	AGTAAA	-22	NA	29942210	30015704	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_29942372_29942487_29942665_29971192_29971228_29985222_29985302_29986281_29986418_30005360_30005453_30005650_30005709_30007469_30007639_30009004_30009354_30011093_30011237_30012284_30012532_30014886
transcript_104716.known	chr19	+	3460	11	FSM	ENSG00000105176.18	ENST00000392271.6	3460	11	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_2	69.7954153222115	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTTTGAGCCTGTCTA	29935628	True	NA	13	True	ATTAAA	-21	NA	29942238	30016612	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_29942665_29971192_29971228_29985222_29985302_29986281_29986418_30005360_30005453_30005650_30005709_30007469_30007639_30009004_30009354_30011093_30011237_30012284_30012532_30014886
transcript_104717.known	chr19	+	2495	10	FSM	ENSG00000105176.18	ENST00000574110.5	2495	10	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	107.284668056531	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGTTGTGAACTTTAT	29935650	True	NA	32	True	AGTAAA	-22	NA	29942260	30015704	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_29942665_29985222_29985302_29986281_29986418_30005360_30005453_30005650_30005709_30007469_30007639_30009004_30009354_30011093_30011237_30012284_30012532_30014886
transcript_10472.known	chr1	-	4318	8	FSM	ENSG00000142892.15	ENST00000445065.5	4318	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	73.6339540135763	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGGAAAGGTGGCAGTGT	-77216175	True	NA	-6	True	ATTAAA	-17	NA	77219430	77088989	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_77092491_77122274_77122360_77154448_77154622_77161294_77161406_77161593_77161712_77163845_77163943_77166718_77166831_77219309
transcript_104726.known	chr19	-	5065	2	FSM	ENSG00000121297.8	ENST00000240587.5	5065	2	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTTGCGTTCACAAT	-31348023	True	NA	0	True	ATTAAA	-19	NA	31349436	31274944	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_31279753_31349179
transcript_104742.known	chr19	+	1802	1	FSM	ENSG00000278875.1	ENST00000625085.1	1802	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAGGGATTTTCCCAAA	NA	False	NA	-16	True	TTTAAA	-2	NA	31364296	31366098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_31364300_31366100
transcript_104743.known	chr19	+	7716	7	FSM	ENSG00000168813.17	ENST00000355898.6	7716	7	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	10.8269211792745	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTACCTGTTTCTTTAGC	32342016	True	NA	NA	False	AATAAA	-13	NA	32345609	32387667	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_32345784_32347244_32347339_32352828_32354958_32356615_32356734_32360503_32360619_32382466_32382602_32382716
transcript_104746.known	chr19	+	7638	6	FSM	ENSG00000168813.17	ENST00000311921.8	7638	6	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_1	31.582273509043	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTACCTGTTTCTTTAGC	32342000	True	NA	NA	False	AATAAA	-13	NA	32345593	32387667	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_32345784_32352828_32354958_32356615_32356734_32360503_32360619_32382466_32382602_32382716
transcript_104751.known	chr19	+	6015	19	FSM	ENSG00000178904.19	ENST00000342179.9	6015	19	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	15.042429702612	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGATGAGTGTCTTGCAT	32405699	True	NA	NA	False	AGTAAA	-16	NA	32406124	32485889	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_32406303_32408216_32408357_32411238_32411373_32432715_32432807_32436445_32436568_32437193_32437340_32439111_32439236_32439775_32439911_32453144_32453277_32454938_32455041_32458099_32458174_32458350_32458510_32463365_32463489_32463868_32463981_32464727_32464785_32468730_32468814_32477521_32477655_32480398_32480558_32482078
transcript_104754.known	chr19	+	5978	19	FSM	ENSG00000178904.19	ENST00000392250.7	5978	19	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	11.8968042186666	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATGAGTGTCTTGCATT	32403716	True	NA	NA	False	AGTAAA	-17	NA	32405769	32485890	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_32405910_32408216_32408357_32411238_32411373_32432715_32432807_32436445_32436568_32437193_32437340_32439111_32439236_32439775_32439911_32453144_32453277_32454938_32455041_32458099_32458174_32458350_32458510_32463365_32463489_32463868_32463981_32464727_32464785_32468730_32468814_32477521_32477655_32480398_32480558_32482078
transcript_104761.known	chr19	-	972	3	FSM	ENSG00000267213.4	ENST00000592680.2	972	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTGTACTTTTTCTCA	-32405149	True	NA	1	True	AATAAA	-24	NA	32405560	32390049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_32390334_32399750_32399869_32404990
transcript_104764.known	chr19	+	558	6	FSM	ENSG00000105185.12	ENST00000221784.8	558	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	926.273091480045	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGGTAAGTTGTTTTA	32551456	True	NA	14	True	AATAAA	-20	NA	32581201	32587425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_32581328_32582194_32582233_32584954_32585012_32585815_32585908_32586857_32586930_32587252
transcript_104766.known	chr19	+	601	6	FSM	ENSG00000105185.12	ENST00000586035.1	601	6	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	932.057208544626	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAATAAAACATTTGGGT	32581507	False	NA	3	True	AATAAA	-9	NA	32581525	32587414	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_32581701_32582194_32582233_32584949_32585012_32585815_32585908_32586857_32586930_32587252
transcript_104769.known	chr19	+	468	5	FSM	ENSG00000105185.12	ENST00000592786.5	468	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	973.273952954665	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAAGTGGCCAGATCTGT	32551486	True	NA	41	True	AATAAA	-29	NA	32581231	32587452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_32581328_32582194_32582233_32584949_32585012_32586857_32586930_32587252
transcript_10477.known	chr1	+	555	1	FSM	ENSG00000226084.5	ENST00000471722.1	555	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	323	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCAGCATTAAAATAAATG	77128616	False	NA	NA	False	AAGAAA	-34	NA	77129113	77129668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_77129100_77129700
transcript_104772.known	chr19	+	1799	4	FSM	ENSG00000105185.12	ENST00000419343.7	1799	4	0	0	0	0	multi-exon	FALSE	canonical	3	2119	junction_1	133.27665461988	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCCTTTTAAAAAAATAAAC	32551455	True	NA	-24	True	NA	NA	NA	32581200	32587387	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_32581328_32582194_32582233_32584949_32585012_32585815
transcript_10478.known	chr1	+	3280	14	FSM	ENSG00000154027.19	ENST00000354567.7	3280	14	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_11	6.6954015836889	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTCTTTTTCTATTTATT	77281731	True	NA	NA	False	AATAAA	-18	NA	77282018	77559966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_77282374_77286940_77287128_77293792_77293961_77297558_77297729_77297833_77297948_77340376_77340569_77410980_77411072_77417638_77417716_77483316_77483360_77486307_77486353_77518563_77518728_77521826_77521944_77535846_77536039_77558601
transcript_104781.known	chr19	-	4432	29	FSM	ENSG00000105186.16	ENST00000306065.9	4432	29	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_26	28.660641966976	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCATGGTATTTTTTT	-32669631	True	NA	-7	True	AGTAAA	-16	NA	32675180	32597005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_32598379_32599703_32599777_32599971_32600051_32602014_32602127_32604262_32604425_32605834_32605955_32607634_32607833_32615657_32615781_32617588_32617634_32619259_32619380_32619493_32619554_32622421_32622620_32625873_32625967_32626711_32626828_32628082_32628166_32628721_32628850_32631401_32631495_32639355_32639489_32640306_32640386_32642023_32642146_32643122_32643200_32643286_32643353_32643430_32643485_32643571_32643632_32644324_32644480_32646458_32646616_32649681_32649793_32658913_32659046_32675070
transcript_104786.known	chr19	+	3103	3	FSM	ENSG00000213965.4	ENST00000397061.4	3103	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAGATTAGAGAACTATAT	32691594	True	NA	NA	False	AATAAA	-20	NA	32691820	32713792	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_32692675_32709184_32709393_32711751
transcript_104787.known	chr19	-	5673	19	FSM	ENSG00000121289.18	ENST00000305768.10	5673	19	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_7	17.209672847157	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCTTCCTGAGTGTTT	-32969321	True	NA	-1	True	ATTAAA	-17	NA	32971958	32875924	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_32879379_32881843_32882014_32887751_32887842_32899856_32899999_32901244_32901413_32915336_32915518_32918223_32918340_32923438_32923543_32926189_32926274_32926933_32926985_32931428_32931572_32933450_32933670_32937630_32937674_32939856_32939886_32948265_32948369_32953614_32953802_32959899_32960059_32966359_32966467_32971835
transcript_104795.known	chr19	-	1340	9	FSM	ENSG00000121289.18	ENST00000590597.6	1340	9	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	14.1509716980849	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGTACAAAGTAAAAGAGGC	-32969326	True	NA	NA	False	AATAAA	-38	NA	32971963	32931206	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_32931572_32933450_32933670_32937630_32937674_32939856_32939886_32948265_32948369_32953614_32953802_32959899_32960059_32966359_32966467_32971835
transcript_104797.nic	chr19	-	854	8	ISM	ENSG00000121289.18	ENST00000590597.6	1340	9	-25	2390	3	-2390	5prime_fragment	FALSE	canonical	3	48	junction_1	15.1226279975082	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGGACCTAAACAATATGA	-32969351	True	NA	40	True	ATTAAA	-10	NA	32971988	32933596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_32933670_32937630_32937674_32939856_32939886_32948265_32948369_32953614_32953802_32959899_32960059_32966359_32966467_32971835
transcript_104798.nic	chr19	-	882	7	ISM	ENSG00000121289.18	ENST00000590597.6	1340	9	-25	6323	3	0	5prime_fragment	FALSE	canonical	3	59	junction_1	13.4989711542111	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTTGTTGAACTTTCACC	-32969351	True	NA	1	True	AATAAA	-24	NA	32971988	32937529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_32937674_32939856_32939886_32948265_32948369_32953614_32953802_32959899_32960059_32966359_32966467_32971835
transcript_1048.known	chr1	+	2610	14	FSM	ENSG00000197785.14	ENST00000672388.1	2610	14	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	140.778688206896	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGCGGGGGTGTCTGA	1499135	True	NA	-73	True	NA	NA	NA	1512164	1534584	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1512474_1516011_1516089_1517310_1517776_1518920_1518991_1520140_1520307_1522743_1522900_1523510_1523568_1523838_1523965_1524272_1524398_1525239_1525292_1526460_1526532_1527694_1527863_1529222_1529332_1533925
transcript_104800.known	chr19	-	558	2	FSM	ENSG00000121289.18	ENST00000592401.1	558	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCCACACCCCGGCCTCC	-32969279	True	NA	NA	False	NA	NA	NA	32971916	32971172	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_32971650_32971835
transcript_104801.known	chr19	-	2903	2	FSM	ENSG00000121289.18	ENST00000591863.1	2903	2	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCTGTGTACCTCATTC	-32969354	True	NA	0	True	AATAAA	-19	NA	32971991	32968908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_32971656_32971835
transcript_104803.known	chr19	+	2313	5	FSM	ENSG00000131944.10	ENST00000588258.6	2313	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	4.76313972081441	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAAAAATTAGCCAGGCA	32971664	True	NA	NA	False	NA	NA	NA	32972241	32978229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_32972347_32973183_32973303_32973425_32973563_32974059_32974213_32976430
transcript_104804.known	chr19	+	875	5	FSM	ENSG00000131944.10	ENST00000254262.9	875	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	17.1901134376711	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCGGATCATCTGAGGT	32971631	True	NA	NA	False	NA	NA	NA	32972208	32976816	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_32972347_32973183_32973303_32973483_32973563_32974059_32974213_32976430
transcript_104805.known	chr19	+	865	5	FSM	ENSG00000131944.10	ENST00000590281.1	865	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	19.8289560996034	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAGACAGCGGATCATCTG	32971726	True	NA	NA	False	NA	NA	NA	32972303	32976812	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_32972378_32973183_32973303_32973425_32973563_32974059_32974213_32976430
transcript_104807.known	chr19	+	784	3	FSM	ENSG00000131944.10	ENST00000590179.1	784	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	18.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTGCAGTGAGCTGAGAT	32971682	True	NA	NA	False	NA	NA	NA	32972259	32976974	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_32972347_32974059_32974213_32976430
transcript_104809.known	chr19	-	3501	15	FSM	ENSG00000131941.8	ENST00000254260.8	3501	15	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_13	8.55742904362839	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAATATTTCTTTTTACTT	-33062454	True	NA	-6	True	AATAAA	-18	NA	33064888	32978591	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_32980257_32990513_32990670_32991822_32991970_32993976_32994054_32996025_32996221_32999585_32999706_33002246_33002404_33002812_33003001_33008013_33008181_33011678_33011804_33012646_33012725_33021570_33021647_33026503_33026633_33044248_33044365_33064783
transcript_104817.known	chr19	+	3191	20	FSM	ENSG00000076650.7	ENST00000170564.7	3191	20	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_15	14.7114442798042	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGCCGTTTTTTGGGA	33080525	True	NA	NA	False	NA	NA	NA	33081180	33130542	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_33081267_33088133_33088269_33090779_33090866_33093358_33093520_33094171_33094270_33095761_33095821_33096206_33096447_33097754_33097903_33101494_33101575_33106694_33106900_33109716_33110017_33111723_33111903_33112485_33112614_33113766_33113904_33114252_33114420_33117824_33118042_33119009_33119118_33125104_33125203_33126587_33126734_33130129
transcript_104820.nic	chr19	+	2688	19	ISM	ENSG00000076650.7	ENST00000170564.7	3191	20	-5	3904	-5	-3768	5prime_fragment	FALSE	canonical	3	54	junction_15	15.0932287982246	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAGAAAAGTAGTAGCTC	33080520	True	NA	NA	False	AATAAA	-4	NA	33081175	33126638	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_33081267_33088133_33088269_33090779_33090866_33093358_33093520_33094171_33094270_33095761_33095821_33096206_33096447_33097754_33097903_33101494_33101575_33106694_33106900_33109716_33110017_33111723_33111903_33112485_33112614_33113766_33113904_33114252_33114420_33117824_33118042_33119009_33119118_33125104_33125203_33126587
transcript_104823.nic	chr19	+	2637	18	ISM	ENSG00000076650.7	ENST00000170564.7	3191	20	-5	5340	-5	-5204	5prime_fragment	FALSE	canonical	3	54	junction_15	15.5182669456528	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGAGACTTGTGTGTACC	33080520	True	NA	NA	False	AAGAAA	-25	NA	33081175	33125202	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_33081267_33088133_33088269_33090779_33090866_33093358_33093520_33094171_33094270_33095761_33095821_33096206_33096447_33097754_33097903_33101494_33101575_33106694_33106900_33109716_33110017_33111723_33111903_33112485_33112614_33113766_33113904_33114252_33114420_33117824_33118042_33119009_33119118_33125104
transcript_104826.nic	chr19	+	2398	15	ISM	ENSG00000076650.7	ENST00000170564.7	3191	20	-309	16243	-27	1620	5prime_fragment	FALSE	canonical	3	78	junction_14	10.4727537652984	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGATTCCATTAGTGAATT	NA	False	NA	NA	False	AAGAAA	-38	NA	33080871	33114299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_33081267_33088133_33088269_33090779_33090866_33093358_33093520_33094171_33094270_33095761_33095821_33096206_33096447_33097754_33097903_33101494_33101575_33106694_33106900_33109716_33110017_33111723_33111903_33112485_33112614_33113766_33113904_33114252
transcript_104838.known	chr19	-	1946	11	FSM	ENSG00000130876.11	ENST00000253188.8	1946	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_9	5.38887743412299	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGTGCTATGGGGAGTCC	-33225638	True	NA	-8	True	AATAAA	-16	NA	33225850	33208663	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_33209022_33209307_33209486_33210466_33210617_33210801_33210899_33211224_33211329_33211413_33211538_33212291_33212446_33212513_33212640_33212850_33213003_33215768_33215974_33225552
transcript_104839.known	chr19	+	2198	1	FSM	ENSG00000267296.2	ENST00000592982.2	2198	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGGTAGGGTCCTAATT	33302728	True	NA	14	True	ATTAAA	-14	NA	33302856	33305054	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_33302900_33305100
transcript_104840.known	chr19	+	3730	2	FSM	ENSG00000153879.9	ENST00000284000.9	3730	2	0	0	0	0	multi-exon	FALSE	canonical	3	641	junction_1	0	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTTTCATCGTGGCTT	33368691	True	NA	18	True	AATAAA	-21	NA	33373708	33382686	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_33373896_33379143
transcript_104844.known	chr19	-	1804	16	FSM	ENSG00000124299.15	ENST00000651901.1	1804	16	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	249.321265305095	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAATGATTGAAAATAAT	-33515132	True	NA	NA	False	ATTAAA	-9	NA	33521756	33387107	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_33387482_33387654_33387745_33387889_33388082_33391294_33391480_33401720_33401870_33411671_33411750_33413574_33413644_33462994_33463042_33463986_33464063_33478045_33478091_33489995_33490058_33493289_33493338_33500937_33501002_33511027_33511156_33512592_33512777_33521743
transcript_104848.known	chr19	-	1929	16	FSM	ENSG00000124299.15	ENST00000588328.6	1929	16	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_4	249.99463105346	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTGTGCGTGGCTTCCC	-33515125	True	NA	-2	True	AATAAA	-17	NA	33521749	33386951	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_33387482_33387889_33388082_33391294_33391480_33396089_33396156_33401720_33401870_33411671_33411750_33413574_33413644_33462994_33463042_33463986_33464063_33478045_33478091_33489995_33490058_33493289_33493338_33500937_33501002_33511027_33511156_33512592_33512777_33521743
transcript_104851.known	chr19	-	1907	15	FSM	ENSG00000124299.15	ENST00000244137.12	1907	15	0	0	0	0	multi-exon	TRUE	canonical	3	649	junction_14	49.8649707321928	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGCGTGGCTTCCCCT	-33515167	True	NA	0	True	AATAAA	-19	NA	33521791	33386949	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_33387482_33387889_33388082_33391294_33391480_33401720_33401870_33411671_33411750_33413574_33413644_33462994_33463042_33463986_33464063_33478045_33478091_33489995_33490058_33493289_33493338_33500937_33501002_33511027_33511156_33512592_33512777_33521743
transcript_104857.known	chr19	-	1754	13	FSM	ENSG00000124299.15	ENST00000397032.8	1754	13	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_6	195.926573547904	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGCAATAAAAGGTTTCC	-33515167	True	NA	-30	True	NA	NA	NA	33521791	33386979	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_33387482_33387889_33388082_33391294_33391480_33401720_33401870_33411671_33411750_33413574_33413644_33478045_33478091_33489995_33490058_33493289_33493338_33500937_33501002_33511027_33511156_33512592_33512777_33521743
transcript_104863.known	chr19	-	1020	9	FSM	ENSG00000124299.15	ENST00000651646.1	1020	9	0	0	0	0	multi-exon	FALSE	canonical	3	649	junction_8	54.2008706110889	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCCATTATGTCTGCTG	-33515134	True	NA	NA	False	AGTAAA	-26	NA	33521758	33462643	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_33463042_33463986_33464063_33478045_33478091_33489995_33490058_33493289_33493338_33500937_33501002_33511027_33511156_33512592_33512777_33521743
transcript_10487.known	chr1	-	6412	15	FSM	ENSG00000036549.13	ENST00000370801.8	6412	15	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_14	61.6852196764396	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAAGTTTGAAGCCTGT	-77682631	False	2189	-5	True	TATAAA	-19	NA	77682658	77562415	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_77565785_77566080_77566182_77568331_77568467_77576067_77576221_77578773_77578870_77579526_77579629_77580997_77581070_77581775_77581892_77581978_77582127_77584516_77584656_77631849_77633406_77639448_77639603_77641383_77641447_77641521_77641656_77682584
transcript_104870.known	chr19	+	1040	5	FSM	ENSG00000124302.13	ENST00000591231.5	1040	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	35.8956821915951	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACGTGTCCCGTATCTTC	33619376	True	NA	NA	False	NA	NA	NA	33621954	33772323	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_33622297_33667766_33667844_33689175_33689392_33771412_33771451_33771956
transcript_104871.nnic	chr19	+	2251	5	NNC	ENSG00000124302.13	novel	2225	5	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	39.3732142452201	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCGGTGTGTACTCTGTG	33619373	True	NA	6	True	AATAAA	-17	NA	33621951	33773506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_33622297_33680767_33680870_33689175_33689392_33771412_33771451_33771956
transcript_104874.known	chr19	+	2133	4	FSM	ENSG00000124302.13	ENST00000438847.7	2133	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	6.34209919681348	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGTGTGTACTCTGTGGTG	33619392	True	NA	9	True	AATAAA	-20	NA	33621970	33773509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_33622297_33689175_33689392_33771412_33771451_33771956
transcript_104891.nic	chr19	+	4188	7	NIC	ENSG00000153885.15	novel	2555	6	NA	NA	-346	0	intron_retention	FALSE	canonical	1	1	junction_1	21.8740079140111	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCTAGCCCTTGGTTTG	33797841	True	NA	72	True	AATAAA	-22	NA	33797990	33815761	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_33798391_33798670_33798767_33800427_33800521_33801166_33801343_33806862_33807008_33811246_33811553_33812789
transcript_104892.known	chr19	+	4918	7	FSM	ENSG00000153885.15	ENST00000284006.10	4918	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	27.92499875659	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTAGCCCTTGGTTTGTA	33796529	True	NA	74	True	AATAAA	-24	NA	33796861	33815763	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_33796988_33798667_33798767_33800427_33800521_33801166_33801343_33806862_33807008_33811246_33811553_33811790
transcript_104893.known	chr19	+	3909	7	FSM	ENSG00000153885.15	ENST00000683859.1	3909	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	22.2336081942031	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCTAGCCCTTGGTTTG	33796537	True	NA	72	True	AATAAA	-22	NA	33796869	33815761	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_33796988_33798667_33798767_33800427_33800521_33801166_33801343_33806862_33807008_33811246_33811553_33812789
transcript_104902.known	chr19	+	2555	6	FSM	ENSG00000153885.15	ENST00000430256.3	2555	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_5	6.34350061086148	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGAGGCTCTGTCCTGT	33798236	False	NA	19	True	CATAAA	-19	NA	33798385	33814243	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_33798767_33800427_33800521_33801166_33801343_33806862_33807008_33811246_33811553_33812789
transcript_104903.known	chr19	+	2040	1	FSM	ENSG00000277013.1	ENST00000610908.1	2040	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCTTCCTTCCTACCAAT	33906075	True	NA	18	True	AATAAA	-21	NA	33906351	33908391	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_33906400_33908400
transcript_104907.known	chr19	+	3424	11	FSM	ENSG00000257103.9	ENST00000433627.9	3424	11	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_10	257.744078496481	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCGTCAAAGTTCTTTCT	NA	False	NA	23	True	AATAAA	-17	NA	34172567	34229288	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_34172764_34194477_34194642_34196633_34196764_34208928_34209052_34215123_34215301_34215595_34215662_34219390_34219574_34219705_34219878_34221506_34221739_34226407_34226465_34227364
transcript_104911.known	chr19	+	3431	10	FSM	ENSG00000257103.9	ENST00000544216.8	3431	10	0	0	0	0	multi-exon	FALSE	canonical	3	730	junction_9	113.516301108184	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCGTCAAAGTTCTTTCT	NA	False	NA	23	True	AATAAA	-17	NA	34172503	34229288	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_34172764_34194477_34194642_34196633_34196764_34208928_34209052_34215123_34215301_34215595_34215662_34219390_34219574_34219705_34219878_34221506_34221739_34227364
transcript_104922.nic	chr19	+	1190	7	ISM	ENSG00000257103.9	ENST00000544216.8	3431	10	-87	9715	-87	-304	5prime_fragment	TRUE	canonical	3	880	junction_6	76.58256256413	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCTTTGATTTTTCTTT	NA	False	NA	NA	False	AATAAA	-14	NA	34172416	34219573	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_34172764_34194477_34194642_34196633_34196764_34208928_34209052_34215123_34215301_34215595_34215662_34219390
transcript_104925.known	chr19	+	6680	14	FSM	ENSG00000166398.14	ENST00000299505.8	6680	14	0	0	0	0	multi-exon	TRUE	canonical	3	56	junction_1	15.9344069686884	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTATCCTTGTTTAAAA	34253426	True	NA	NA	False	ATTAAA	-19	NA	34254553	34355566	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_34254615_34299678_34300969_34319906_34320117_34327420_34327562_34327770_34327867_34327989_34328152_34330188_34330348_34333703_34333802_34339866_34339993_34341421_34342456_34347876_34348043_34349015_34349154_34351513_34351593_34352646
transcript_104928.known	chr19	+	632	4	FSM	ENSG00000166398.14	ENST00000588470.5	632	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	30.554141381416	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCCAGAAAAAAAGAACAGCG	34253424	True	NA	NA	False	NA	NA	NA	34254551	34320016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_34254615_34299678_34299924_34300754_34300969_34319906
transcript_104932.nic	chr19	+	2057	19	NIC	ENSG00000105220.17	novel	4341	19	NA	NA	11	0	combination_of_known_junctions	TRUE	canonical	3	25	junction_1	405.269716620767	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTAGGCTCAGCCTCTG	34363672	True	NA	30	True	AATAAA	-15	NA	34365009	34400328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_34365091_34365259_34365389_34366344_34366436_34366782_34366852_34368582_34368703_34377502_34377587_34377734_34377882_34378933_34379006_34379517_34379563_34381465_34381520_34393247_34393309_34393727_34393772_34393913_34394067_34396300_34396431_34396580_34396658_34399206_34399336_34399555_34399632_34399718_34399786_34399900
transcript_104942.known	chr19	+	4125	18	FSM	ENSG00000105220.17	ENST00000356487.11	4125	18	0	0	0	0	multi-exon	FALSE	canonical	3	1405	junction_10	169.402675409765	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGCTTTGTGTGTTT	34363858	False	NA	28	True	AATAAA	-20	NA	34365195	34402413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_34365389_34366344_34366436_34366782_34366852_34368582_34368703_34377502_34377587_34377734_34377882_34378933_34379006_34379517_34379563_34381465_34381520_34393247_34393309_34393727_34393772_34393913_34394067_34396300_34396431_34396580_34396658_34399206_34399336_34399555_34399632_34399718_34399786_34399900
transcript_104956.known	chr19	+	1157	7	FSM	ENSG00000126249.8	ENST00000246535.4	1157	7	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	26.4112770527204	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTGTATGTACCTTAT	34400662	True	NA	10	True	ATTAAA	-20	NA	34404398	34426168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_34404539_34404648_34404816_34404929_34404991_34409160_34409511_34413736_34413848_34421518_34421668_34425989
transcript_104959.known	chr19	+	1227	6	FSM	ENSG00000126249.8	ENST00000587385.6	1227	6	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	28.0670625466934	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATGTTTACATCCAAATA	34400688	True	NA	-8	True	ATTAAA	-2	NA	34404424	34426150	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_34404539_34404648_34404991_34409160_34409511_34413736_34413848_34421518_34421668_34425989
transcript_104967.nic	chr19	+	2761	18	NIC	ENSG00000126261.13	novel	4005	17	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	84	junction_1	249.044888326149	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATGCCTGCACAGTTCC	34402894	True	NA	28	True	AATAAA	-20	NA	34428357	34469890	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_34428571_34430092_34430187_34430575_34430660_34431860_34431932_34433347_34433413_34434867_34434969_34438644_34438767_34443843_34443912_34444999_34445122_34450264_34450365_34451980_34452148_34454259_34454354_34454443_34454557_34458768_34458925_34460469_34460567_34464025_34464132_34466877_34467015_34469039
transcript_104969.known	chr19	+	4005	17	FSM	ENSG00000126261.13	ENST00000246548.9	4005	17	0	0	0	0	multi-exon	FALSE	canonical	3	646	junction_1	87.2288656351784	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGTTCCTTGTGTAAT	34402917	True	NA	26	True	ACTAAA	-19	NA	34428380	34471251	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_34428571_34430575_34430660_34431860_34431932_34433347_34433413_34434867_34434969_34438644_34438767_34443843_34443912_34444999_34445122_34450264_34450365_34451980_34452148_34454259_34454354_34454443_34454557_34458768_34458925_34460469_34460567_34464025_34464132_34466877_34467015_34469039
transcript_104980.nic	chr19	+	2540	16	NIC	ENSG00000126261.13	novel	4005	17	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_12	212.10244904029	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATGCCTGCACAGTTCC	NA	False	NA	28	True	AATAAA	-20	NA	34428328	34469890	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_34428571_34430575_34430660_34431860_34431932_34433347_34433413_34434867_34434969_34438644_34438767_34443843_34443912_34444999_34445122_34450264_34450365_34451980_34452148_34454259_34454354_34454443_34454557_34460469_34460567_34464025_34464132_34466877_34467015_34469039
transcript_10500.known	chr1	-	587	5	FSM	ENSG00000036549.13	ENST00000463166.5	587	5	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_4	27.7758888246623	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAAACGGCTTGGATGAA	-77681214	True	NA	NA	False	NA	NA	NA	77683403	77633311	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_77633406_77639448_77639603_77641383_77641447_77641521_77641656_77683261
transcript_105006.known	chr19	+	13545	8	FSM	ENSG00000142279.13	ENST00000590071.7	13545	8	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	16.9573294008273	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCCTTATGTGTTGTGT	34481570	True	NA	8	True	AATAAA	-22	NA	34481757	34512304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_34482642_34490375_34490478_34493036_34493105_34493262_34493326_34493491_34493623_34494585_34494638_34495702_34495772_34500128
transcript_105011.known	chr19	-	612	3	FSM	ENSG00000268751.2	ENST00000687185.1	712	3	96	4	-36	0	multi-exon	FALSE	canonical	3	29	junction_1	15.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGCTTCTGTGTGTGTTC	-34577105	True	NA	-6	True	AATAAA	-15	NA	34577701	34576732	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_34576995_34577265_34577457_34577542
transcript_105014.known	chr19	+	675	5	FSM	ENSG00000089335.22	ENST00000506901.5	675	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	92.8018722871473	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	34674112	True	NA	NA	False	NA	NA	NA	34677653	34684172	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_34677863_34678736_34678814_34682776_34682898_34683151_34683239_34683991
transcript_105015.nic	chr19	+	2633	5	NIC	ENSG00000089335.22	novel	2590	5	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	99.3261672471056	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAACTCTTTCTCTGTGAC	34674110	True	NA	20	True	AATAAA	-34	NA	34677651	34686391	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_34677863_34678736_34678814_34682776_34682898_34683154_34683239_34684251
transcript_105017.known	chr19	+	2600	5	FSM	ENSG00000089335.22	ENST00000457781.6	2600	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	69.2147924940904	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTCTGTGACTGTTTG	34674120	True	NA	26	True	AATAAA	-40	NA	34677661	34686397	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_34677834_34678736_34678814_34682776_34682898_34683154_34683239_34684251
transcript_105018.known	chr19	+	2955	5	FSM	ENSG00000089335.22	ENST00000505365.2	2955	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	102.436260669745	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTCTCTGTGACTGTTT	34674294	False	NA	25	True	AATAAA	-39	NA	34677835	34686396	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_34678104_34678736_34678814_34682776_34682898_34683154_34683239_34683991
transcript_105019.known	chr19	+	2853	5	FSM	ENSG00000089335.22	ENST00000505242.6	2853	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	82.1016899947863	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTCTCTGTGACTGTTT	34674136	True	NA	25	True	AATAAA	-39	NA	34677677	34686396	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_34678104_34678736_34678814_34682776_34682898_34683154_34683239_34684251
transcript_105022.known	chr19	+	2590	5	FSM	ENSG00000089335.22	ENST00000423823.6	2590	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	99.3261672471056	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAACTCTTTCTCTGTGAC	34674147	True	NA	20	True	AATAAA	-34	NA	34677688	34686391	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_34677857_34678736_34678814_34682776_34682898_34683154_34683239_34684251
transcript_105023.known	chr19	-	540	1	FSM	ENSG00000274104.1	ENST00000612269.1	540	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGAGAGAGACAGGGAG	-34733644	False	193	1	True	ATTAAA	-23	NA	34733837	34733297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_34733300_34733800
transcript_105024.known	chr19	+	498	5	FSM	ENSG00000197841.15	ENST00000593781.5	498	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	24.4783067224839	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTCTAAGAAGAATTTGG	34733043	True	NA	NA	False	AATAGA	-31	NA	34734262	34740725	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_34734361_34734969_34735047_34739147_34739269_34739522_34739610_34740610
transcript_105028.known	chr19	+	5792	4	FSM	ENSG00000197841.15	ENST00000492450.3	5792	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	23.6126143312331	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTATGAAGATTAAATGC	34733023	True	NA	NA	False	AATAAA	-15	NA	34734242	34745378	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_34735047_34739147_34739269_34739522_34739622_34740610
transcript_105030.known	chr19	+	2265	4	FSM	ENSG00000197841.15	ENST00000459757.6	2265	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	23.6126143312331	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAGGAAGACCTTTTAGC	34734361	True	NA	NA	False	NA	NA	NA	34734574	34742186	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_34735047_34739147_34739269_34739525_34739622_34740610
transcript_105033.known	chr19	-	948	3	FSM	ENSG00000153896.19	ENST00000588760.1	948	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	3.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCGTTTTGTTTTGTTTT	-34772908	True	NA	5	True	AATAAA	-30	NA	34773200	34766967	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_34767412_34769428_34769556_34772823
transcript_105036.known	chr19	-	939	4	FSM	ENSG00000271109.2	ENST00000665881.1	939	4	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_1	13.4246870437348	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGGTCTCATATTTTTAG	NA	False	NA	-1	True	AATAAA	-18	NA	34860715	34849047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_34849550_34850668_34850795_34860173_34860303_34860533
transcript_105037.known	chr19	-	874	3	FSM	ENSG00000271109.2	ENST00000661859.1	874	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	28.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGGTCTCATATTTTTAG	NA	False	NA	-1	True	AATAAA	-18	NA	34860691	34849047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_34849550_34860173_34860303_34860448
transcript_105038.known	chr19	-	847	3	FSM	ENSG00000271109.2	ENST00000653487.1	847	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	11.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGTCTCATATTTTTAGTT	NA	False	NA	1	True	AATAAA	-20	NA	34860747	34849045	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_34849550_34860173_34860303_34860533
transcript_105039.known	chr19	-	1046	2	FSM	ENSG00000271109.2	ENST00000655389.1	1046	2	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGTCTCATATTTTTAGTT	NA	False	NA	1	True	AATAAA	-20	NA	34860715	34849045	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_34849550_34860173
transcript_105041.known	chr19	+	2583	6	FSM	ENSG00000168661.15	ENST00000601957.5	2583	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	6.7705243519243	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACTGCTGAACTTCAAATA	34926492	True	NA	5	True	AATAAA	-20	NA	34926979	34945168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_34927217_34929883_34929957_34931842_34931994_34933627_34933724_34942593_34942674_34943222
transcript_105042.known	chr19	+	2579	5	FSM	ENSG00000168661.15	ENST00000303586.11	2579	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	10.1334840997556	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACCACTGCTGAACTTCA	34926415	True	NA	1	True	AATAAA	-16	NA	34926902	34945164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_34927217_34929883_34929957_34931842_34931994_34933624_34933724_34943222
transcript_105043.known	chr19	+	2580	5	FSM	ENSG00000168661.15	ENST00000601142.2	2580	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	9.44722181384559	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACTGCTGAACTTCAAATA	34926415	True	NA	5	True	AATAAA	-20	NA	34926902	34945168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_34927217_34929883_34929957_34931842_34931994_34933627_34933724_34943222
transcript_105045.known	chr19	-	4068	4	FSM	ENSG00000180884.10	ENST00000404801.2	4068	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	4.08248290463863	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTCTGGTTTCTTTCA	-34963830	True	NA	-1	True	CATAAA	-15	NA	34964229	34956353	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_34959572_34960234_34960358_34960867_34960995_34963629
transcript_105049.nnic	chr19	+	2975	20	NNC	ENSG00000089351.15	novel	2659	20	NA	NA	-81	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_2	522.596574859998	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGCTGTGCCTGTGGG	35000229	False	NA	13	True	AATAAA	-13	NA	35000241	35026469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_35000487_35005684_35005932_35009118_35009330_35009422_35009444_35009887_35009973_35010091_35010196_35010283_35010380_35011473_35011555_35013255_35013369_35013540_35013692_35014188_35014388_35015823_35015968_35019190_35019310_35019390_35019534_35021501_35021606_35021690_35021865_35021950_35022039_35023235_35023344_35023426_35023548_35026048
transcript_10505.known	chr1	-	603	4	FSM	ENSG00000036549.13	ENST00000433749.5	603	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	90.1369328669812	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTCAGAAAGGAAATAATA	-77682648	False	NA	0	True	NA	NA	NA	77682675	77633181	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_77633406_77639448_77639603_77641521_77641656_77682584
transcript_105055.known	chr19	+	2659	20	FSM	ENSG00000089351.15	ENST00000317991.10	2659	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	530.083038495697	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGCTGTGCCTGTGGG	34983599	True	NA	13	True	AATAAA	-13	NA	35000322	35026469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35000487_35009118_35009330_35009422_35009444_35009887_35009973_35010091_35010196_35010283_35010380_35011473_35011555_35013255_35013369_35013540_35013692_35014188_35014388_35015823_35015968_35019190_35019310_35019390_35019534_35021501_35021606_35021690_35021865_35021950_35022039_35022899_35022912_35023235_35023344_35023426_35023548_35026048
transcript_105070.known	chr19	+	2647	19	FSM	ENSG00000089351.15	ENST00000680623.1	2647	19	0	0	0	0	multi-exon	FALSE	canonical	3	1343	junction_7	166.987958832551	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGCTGTGCCTGTGGG	34983599	True	NA	13	True	AATAAA	-13	NA	35000322	35026469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35000487_35009118_35009330_35009422_35009444_35009887_35009973_35010091_35010196_35010283_35010380_35011473_35011555_35013255_35013369_35013540_35013692_35014188_35014388_35015823_35015968_35019190_35019310_35019390_35019534_35021501_35021606_35021690_35021865_35021950_35022039_35023235_35023344_35023426_35023548_35026048
transcript_105093.known	chr19	+	2534	18	FSM	ENSG00000089351.15	ENST00000600231.5	2534	18	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_7	408.182697069402	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGCTGTGCCTGTGGG	34983599	True	NA	13	True	AATAAA	-13	NA	35000322	35026469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35000487_35009118_35009330_35009422_35009444_35009887_35009973_35010091_35010196_35010283_35010380_35011473_35011555_35013540_35013692_35014188_35014388_35015823_35015968_35019190_35019310_35019390_35019534_35021501_35021606_35021690_35021865_35021950_35022039_35023235_35023344_35023426_35023548_35026048
transcript_10511.nic	chr1	-	4535	25	NIC	ENSG00000077254.14	novel	4502	25	NA	NA	-53	0	combination_of_known_junctions	TRUE	canonical	3	179	junction_11	87.7589818131961	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAATGTTGAATTTATTT	NA	False	NA	-4	True	AATAAA	-21	NA	77759905	77695986	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_77697475_77697862_77697932_77701368_77701472_77711746_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721902_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77745420_77745600_77759642
transcript_10512.known	chr1	-	4502	25	FSM	ENSG00000077254.14	ENST00000370793.5	4502	25	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_24	83.0687361800789	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTGAATGTTGAATTT	-77753963	True	NA	-8	True	AATAAA	-17	NA	77759852	77695990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_77697475_77697862_77697932_77701368_77701472_77711746_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721926_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77745420_77745600_77759642
transcript_105125.nic	chr19	+	2294	7	ISM	ENSG00000089351.15	ENST00000317991.10	2659	20	-80	13463	-80	-578	5prime_fragment	FALSE	canonical	3	1407	junction_6	191.280480504996	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAACATTCTCTGGCCAG	35000230	False	NA	NA	False	TATAAA	-6	NA	35000242	35013006	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_35000487_35009118_35009330_35009422_35009444_35009887_35009973_35010091_35010196_35010283_35010380_35011473
transcript_105127.known	chr19	+	808	6	FSM	ENSG00000089351.15	ENST00000424536.2	808	6	0	0	0	0	multi-exon	FALSE	canonical	3	1675	junction_1	131.298134030915	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGCCCCTCCCTTCGTAA	35000411	False	NA	28	True	AGTAAA	-25	NA	35000455	35010639	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35000487_35009118_35009330_35009422_35009444_35009887_35009973_35010091_35010196_35010283
transcript_10513.nic	chr1	-	4327	24	NIC	ENSG00000077254.14	novel	4327	24	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	179	junction_11	76.9956913335542	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAATGTTGAATTTATTT	NA	False	NA	-4	True	AATAAA	-21	NA	77759876	77695986	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_77697475_77697862_77697932_77701368_77701472_77711746_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721902_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77759642
transcript_105137.known	chr19	+	1666	6	FSM	ENSG00000105711.14	ENST00000262631.11	1666	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	8.13879597975032	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATAGTTTCGATTGTGAG	35030257	True	NA	16	True	AATAAA	-16	NA	35030469	35040449	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35030861_35032527_35032695_35033498_35033740_35039116_35039259_35039634_35039707_35039796
transcript_105139.known	chr19	+	1176	6	FSM	ENSG00000105711.14	ENST00000596348.2	1176	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	13.5292276202302	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTGGGAGGGGGCAGGGG	35031327	False	NA	NA	False	NA	NA	NA	35031352	35039922	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35031781_35032527_35032695_35033498_35033740_35039116_35039259_35039634_35039707_35039796
transcript_10514.known	chr1	-	4327	24	FSM	ENSG00000077254.14	ENST00000370794.7	4327	24	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_11	71.0121265503454	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAATGTTGAATTTATTT	-77753963	True	NA	-4	True	AATAAA	-21	NA	77759852	77695986	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_77697475_77697862_77697932_77701368_77701472_77711746_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721926_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77759642
transcript_105140.known	chr19	+	4780	3	FSM	ENSG00000105711.14	ENST00000415950.5	4780	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTCTTGAGGCCAGGAA	35030257	True	NA	NA	False	NA	NA	NA	35030469	35037720	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35030861_35032527_35032695_35033498
transcript_105141.known	chr19	+	4846	3	FSM	ENSG00000105711.14	ENST00000640135.1	4846	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	10	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTGGGAGGCAGAGGTG	35031275	False	NA	NA	False	NA	NA	NA	35031300	35037697	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35031781_35032527_35032695_35033498
transcript_105143.known	chr19	+	1746	13	FSM	ENSG00000105707.15	ENST00000672452.2	1746	13	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	21.0277594304925	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCCTCCGAGCTTACAA	35040654	True	NA	20	True	AATAAA	-16	NA	35041720	35066573	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35041873_35042452_35042523_35049289_35049392_35049474_35049517_35059672_35059803_35059873_35059997_35060128_35060170_35060346_35060513_35060626_35060818_35065249_35065346_35065538_35065682_35065867_35066033_35066248
transcript_105147.nic	chr19	+	1896	13	NIC	ENSG00000105707.15	novel	1783	14	NA	NA	-7	0	combination_of_known_junctions	TRUE	canonical	3	19	junction_1	29.3115449382435	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGGCCTCCGAGCTTAC	35040647	True	NA	18	True	AATAAA	-14	NA	35041713	35066571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_35041873_35042307_35042523_35049289_35049392_35049474_35049517_35059672_35059803_35059873_35059997_35060128_35060170_35060346_35060513_35060626_35060818_35065249_35065346_35065538_35065682_35065867_35066033_35066248
transcript_105150.known	chr19	+	2323	12	FSM	ENSG00000105707.15	ENST00000673426.1	2323	12	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_4	14.2753327095008	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGGCCTCCGAGCTTAC	35040655	True	NA	18	True	AATAAA	-14	NA	35041721	35066571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35042523_35049289_35049392_35049474_35049517_35059672_35059803_35059873_35059997_35060128_35060170_35060346_35060513_35060626_35060818_35065249_35065346_35065538_35065682_35065867_35066033_35066248
transcript_105175.nnic	chr19	-	2657	11	NNC	ENSG00000153902.14	novel	2200	10	NA	NA	-502	0	intron_retention	FALSE	canonical	2	6	junction_10	7.72334124585985	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGCCCAGTGTTGTGGATC	-35142905	False	NA	-6	True	AATAAA	-17	NA	35142953	35124512	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_35125508_35126269_35126776_35126852_35127018_35131385_35131556_35131788_35131861_35131970_35132043_35133317_35133445_35133692_35133765_35134032_35134105_35142269_35142383_35142660
transcript_105178.nnic	chr19	-	2659	10	NIC	ENSG00000153902.14	novel	2200	10	NA	NA	-226	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_2	7.25718035235908	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGCCCAGTGTTGTGGATC	-35142629	False	NA	-6	True	AATAAA	-17	NA	35142677	35124512	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_35125508_35126269_35126776_35126852_35127018_35131385_35131556_35131788_35131861_35131970_35132043_35133317_35133445_35133692_35133765_35134032_35134105_35142269
transcript_105182.nnic	chr19	-	2393	10	NNC	ENSG00000153902.14	novel	2200	10	NA	NA	-365	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_9	7.9364761904127	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGCCCAGTGTTGTGGATC	-35142768	False	22	-6	True	AATAAA	-17	NA	35142816	35124512	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_35125508_35126269_35126776_35126852_35127018_35131385_35131556_35131788_35131861_35131970_35132043_35133692_35133765_35134032_35134105_35142269_35142383_35142660
transcript_105190.nnic	chr19	-	2604	9	NIC	ENSG00000153902.14	novel	2200	10	NA	NA	-298	0	intron_retention	FALSE	canonical	2	8	junction_2	7.3143694191639	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGCCCAGTGTTGTGGATC	-35142675	True	NA	-6	True	AATAAA	-17	NA	35142749	35124512	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_35125508_35126269_35126776_35126852_35127018_35131385_35131556_35131788_35131861_35131970_35132043_35133692_35133765_35134032_35134105_35142269
transcript_105201.known	chr19	+	708	6	FSM	ENSG00000221946.8	ENST00000270310.7	708	6	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_4	23.2946345753695	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTCTGTGTGTTCTCAT	35142441	True	NA	23	True	AATAAA	-24	NA	35143254	35154302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35143365_35148693_35148724_35151253_35151329_35151439_35151483_35151632_35151674_35153893
transcript_105203.known	chr19	+	512	7	FSM	ENSG00000266964.6	ENST00000589121.1	512	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	81.4522695952803	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTTGTCGGTCTCGGTC	NA	False	NA	19	True	AATAAA	-20	NA	35140104	35143052	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35140141_35140596_35140630_35141131_35141207_35141442_35141573_35142471_35142522_35142719_35142772_35142916
transcript_105204.known	chr19	-	2673	9	FSM	ENSG00000153902.14	ENST00000310123.8	2673	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	7.04893608993584	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGCCCAGTGTTGTGGATC	-35135037	False	NA	-6	True	AATAAA	-17	NA	35135059	35124512	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35125508_35126269_35126776_35126852_35127018_35131385_35131556_35131788_35131861_35131970_35132043_35133692_35133765_35134032_35134105_35134510
transcript_105205.known	chr19	+	878	9	FSM	ENSG00000089327.15	ENST00000392219.7	878	9	0	0	0	0	multi-exon	FALSE	canonical	3	782	junction_1	79.2779919019144	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGATCTCTGATCATTT	35144511	True	NA	17	True	AGTAAA	-17	NA	35154734	35169881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35154810_35155550_35155612_35157420_35157502_35158343_35158401_35160708_35160802_35164155_35164246_35166141_35166172_35166250_35166326_35169565
transcript_105206.known	chr19	+	883	9	FSM	ENSG00000089327.15	ENST00000592290.5	883	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	308.721557394361	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACCCTGCCCGCCCCTGA	35144523	True	NA	-82	True	NA	NA	NA	35154746	35169782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35154810_35155550_35155612_35157420_35157618_35158343_35158401_35160708_35160802_35164155_35164246_35166141_35166172_35166250_35166326_35169565
transcript_105207.known	chr19	+	898	9	FSM	ENSG00000089327.15	ENST00000541435.6	898	9	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	296.289949837992	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAAGCACTGTGGTCTTT	35144529	True	NA	-5	True	GGGGCT	-34	NA	35154752	35169859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35154870_35155550_35155612_35157420_35157502_35158343_35158401_35160708_35160802_35164155_35164246_35166141_35166172_35166250_35166326_35169565
transcript_105209.known	chr19	+	892	9	FSM	ENSG00000089327.15	ENST00000423817.7	892	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	316.414260701063	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCAGGATCTCTGATCAT	35154742	False	NA	15	True	AGTAAA	-15	NA	35154941	35169879	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35155033_35155550_35155612_35157420_35157502_35158343_35158401_35160708_35160802_35164155_35164246_35166141_35166172_35166250_35166326_35169565
transcript_10522.known	chr1	-	2917	22	FSM	ENSG00000077254.14	ENST00000370792.7	2917	22	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_8	86.1653475602658	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGTAATAGATTTCAAG	-77753963	True	NA	NA	False	AATAAA	-15	NA	77759852	77711651	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721902_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77745420_77745600_77759642
transcript_105225.known	chr19	+	1932	10	FSM	ENSG00000105699.17	ENST00000605618.6	1932	10	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_4	400.346516574496	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTGGAGAGAACCATTTG	35236954	True	NA	14	True	AATAAA	-15	NA	35249001	35267964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35249132_35250314_35250660_35258944_35259065_35261924_35261982_35262545_35262693_35266358_35266533_35266678_35266739_35266835_35266968_35267108_35267735_35267823
transcript_10523.nic	chr1	-	2994	22	ISM	ENSG00000077254.14	ENST00000370793.5	4502	25	-53	15661	-53	0	5prime_fragment	FALSE	canonical	3	206	junction_21	80.261759969357	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGTAATAGATTTCAAG	NA	False	NA	NA	False	AATAAA	-15	NA	77759905	77711651	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721926_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77745420_77745600_77759642
transcript_105247.known	chr19	+	2105	9	FSM	ENSG00000105699.17	ENST00000354900.7	2105	9	0	0	0	0	multi-exon	FALSE	canonical	3	827	junction_3	195.689645868145	1207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTGGAGAGAACCATTTG	35246804	True	NA	14	True	AATAAA	-15	NA	35248771	35267964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35249132_35250314_35250660_35258944_35259065_35262545_35262693_35266358_35266533_35266678_35266739_35266835_35266968_35267108_35267735_35267823
transcript_105263.known	chr19	+	1963	8	FSM	ENSG00000105699.17	ENST00000360798.7	1963	8	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_3	392.199449468335	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTCTGGAGAGAACCATT	35246797	True	NA	12	True	AATAAA	-13	NA	35248764	35267962	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35249132_35250314_35250660_35258944_35259065_35266358_35266533_35266678_35266739_35266835_35266968_35267108_35267735_35267823
transcript_105274.known	chr19	+	1606	7	FSM	ENSG00000105699.17	ENST00000427250.5	1606	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	489.35243491328	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTCTGGAGAGAACCATT	35236954	True	NA	12	True	AATAAA	-13	NA	35249001	35267962	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35249132_35250314_35250660_35266358_35266533_35266678_35266739_35266835_35266968_35267108_35267735_35267823
transcript_10528.nic	chr1	-	2762	21	NIC	ENSG00000077254.14	novel	2917	22	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	179	junction_8	70.9294543895553	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGTAATAGATTTCAAG	NA	False	NA	NA	False	AATAAA	-15	NA	77759876	77711651	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721902_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77759642
transcript_105280.known	chr19	+	1746	10	FSM	ENSG00000105698.16	ENST00000222305.8	1746	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	38.3235092081178	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTGTGTTTGTCCATC	35268851	False	NA	45	True	AATAAA	-28	NA	35268961	35279821	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35269164_35269445_35269493_35269580_35269700_35269802_35270004_35270446_35270598_35270717_35270806_35271082_35271142_35278697_35278793_35278945_35279075_35279166
transcript_105286.known	chr19	-	1924	16	FSM	ENSG00000161249.21	ENST00000339686.8	1924	16	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_13	485.5748300268	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	-35513517	True	NA	-2	True	AATAAA	-21	NA	35513649	35497219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35511410_35511594_35511762_35511814_35512420_35512478_35512589_35512791_35513049
transcript_10529.nic	chr1	-	2786	21	ISM	ENSG00000077254.14	ENST00000370794.7	4327	24	-24	15665	-24	0	5prime_fragment	FALSE	canonical	3	234	junction_8	62.6921047660708	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGTAATAGATTTCAAG	NA	False	NA	NA	False	AATAAA	-15	NA	77759876	77711651	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721926_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77759642
transcript_105302.known	chr19	-	970	14	FSM	ENSG00000161249.21	ENST00000462721.5	970	14	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_6	440.418856579472	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	-35481317	True	NA	-2	True	AATAAA	-21	NA	35510439	35497219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35497539_35497646_35497682_35498715_35498764_35498873_35498898_35499957_35500030_35500377_35500420_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510378
transcript_105331.known	chr19	-	935	13	FSM	ENSG00000161249.21	ENST00000402589.6	935	13	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_5	410.395566293464	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	-35481309	True	NA	-2	True	AATAAA	-21	NA	35510431	35497219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500377_35500420_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510370
transcript_105336.known	chr19	-	827	13	FSM	ENSG00000161249.21	ENST00000467637.5	827	13	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_9	408.147406650533	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGTACCTCCTCCCT	-35481324	True	NA	NA	False	NA	NA	NA	35510446	35497336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35508204_35508241_35509910_35509962_35510183_35510253_35510370
transcript_105341.known	chr19	-	666	13	FSM	ENSG00000161249.21	ENST00000498211.5	666	13	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_9	441.797362737966	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGTCAGAGTGAGCCG	-35481313	True	NA	NA	False	NA	NA	NA	35510435	35498715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35506125_35506186_35508204_35508241_35509910_35509962_35510183_35510253_35510378
transcript_105348.known	chr19	-	593	12	FSM	ENSG00000161249.21	ENST00000472252.6	593	12	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_2	389.203934306089	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGCTCCTCCCCTTGGCCC	-35481303	True	NA	NA	False	NA	NA	NA	35510425	35497489	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35497539_35497646_35497682_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183_35510253_35510378
transcript_105359.known	chr19	-	820	12	FSM	ENSG00000161249.21	ENST00000480502.5	820	12	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_7	472.875728437667	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCACTGTGACAGTTCTC	-35481337	True	NA	-88	True	NA	NA	NA	35510459	35497305	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500377_35500420_35500532_35500581_35502135_35502184_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510370
transcript_105370.known	chr19	-	867	12	FSM	ENSG00000161249.21	ENST00000414866.6	867	12	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_1	305.690601428393	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAGGAGGAGCTTCCTAC	-35481348	True	NA	-67	True	NA	NA	NA	35510470	35497284	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510370
transcript_105371.nic	chr19	-	996	12	NIC	ENSG00000161249.21	novel	970	14	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	530	junction_1	303.356512298185	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGACTTTCTCAAATTTTA	-35481422	True	NA	-4	True	AATAAA	-19	NA	35510544	35497221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510378
transcript_105377.known	chr19	-	827	12	FSM	ENSG00000161249.21	ENST00000602781.5	827	12	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_4	423.097980172969	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGGCTCATGCCTGTA	-35481306	True	NA	NA	False	AATAAA	-17	NA	35510428	35498501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35498764_35498873_35498898_35499957_35500030_35500377_35500420_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510370
transcript_105378.known	chr19	-	630	12	FSM	ENSG00000161249.21	ENST00000460051.5	630	12	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_9	418.743594992338	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGTCAGAGTGAGCCG	-35481313	True	NA	NA	False	NA	NA	NA	35510435	35498715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35506125_35506186_35509910_35509962_35510183_35510253_35510378
transcript_105386.known	chr19	-	848	11	FSM	ENSG00000161249.21	ENST00000436012.5	848	11	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_1	316.055833675001	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGACTTTCTCAAATTTTA	-35481317	True	NA	-4	True	AATAAA	-19	NA	35510439	35497221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183_35510253_35510370
transcript_105387.nic	chr19	-	945	11	NIC	ENSG00000161249.21	novel	848	11	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	530	junction_1	313.61033146247	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGACTTTCTCAAATTTTA	-35481422	True	NA	-4	True	AATAAA	-19	NA	35510544	35497221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183_35510253_35510378
transcript_105394.known	chr19	-	642	11	FSM	ENSG00000161249.21	ENST00000463292.5	642	11	0	0	0	0	multi-exon	FALSE	canonical	3	705	junction_6	296.607080158246	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAGTGTCAGAGTGAGCC	-35481386	True	NA	NA	False	NA	NA	NA	35510508	35498716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510378
transcript_105417.known	chr19	-	1257	10	FSM	ENSG00000161249.21	ENST00000418261.5	1257	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_7	611.024478707889	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGAAATAAACCTTAGCTG	-35513349	False	NA	-30	True	AAAACA	-33	NA	35513481	35503330	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35511410_35511594_35511762_35511814_35512420_35512478_35512589_35512791_35513049
transcript_105429.known	chr19	-	510	8	FSM	ENSG00000161249.21	ENST00000458071.5	510	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_4	579.483689967867	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCCCACACTCCTGGCC	-35481313	True	NA	-14	True	AATAAA	-6	NA	35510435	35503314	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35506125_35506186_35508204_35508241_35509910_35509962_35510183_35510253_35510370
transcript_105433.known	chr19	-	582	8	FSM	ENSG00000161249.21	ENST00000462538.5	582	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	605.703706107067	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-35481388	True	NA	-3	True	AATAAA	-17	NA	35510510	35503303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35507457_35507512_35508204_35508241_35509910_35509962_35510183_35510253_35510378
transcript_105435.known	chr19	-	364	7	FSM	ENSG00000161249.21	ENST00000450261.1	364	7	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_4	571.102053538206	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCCCGTGACCTCCAGAC	-35481320	True	NA	NA	False	AAAACA	-42	NA	35510442	35503431	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35506125_35506186_35509910_35509962_35510183_35510253_35510370
transcript_10544.nic	chr1	-	1769	12	ISM	ENSG00000077254.14	ENST00000370792.7	2917	22	-53	13970	-53	-7598	5prime_fragment	FALSE	canonical	3	206	junction_11	91.8459903883301	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAACGTTTCTCTTATTC	NA	False	NA	NA	False	AAAAAG	-1	NA	77759905	77725621	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77745420_77745600_77759642
transcript_105444.known	chr19	-	458	6	FSM	ENSG00000161249.21	ENST00000392206.6	458	6	0	0	0	0	multi-exon	FALSE	canonical	3	719	junction_3	381.930674337634	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCCTGGCCTCTGCTCCT	-35481348	True	NA	-5	True	AATAAA	-15	NA	35510470	35503305	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510370
transcript_105445.nic	chr19	-	526	6	NIC	ENSG00000161249.21	novel	582	8	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	719	junction_3	367.673442065102	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-35481422	True	NA	-3	True	AATAAA	-17	NA	35510544	35503303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_35503448_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510378
transcript_105448.known	chr19	-	414	5	FSM	ENSG00000161249.21	ENST00000488892.5	414	5	0	0	0	0	multi-exon	FALSE	canonical	3	745	junction_4	408.656946594573	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-35481353	True	NA	-3	True	AATAAA	-17	NA	35510475	35503303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35510183_35510253_35510370
transcript_105449.known	chr19	-	441	5	FSM	ENSG00000161249.21	ENST00000480507.1	441	5	0	0	0	0	multi-exon	FALSE	canonical	3	806	junction_3	389.13774874715	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-35481388	True	NA	-3	True	AATAAA	-17	NA	35510510	35503303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35510183_35510253_35510378
transcript_10545.nic	chr1	-	1561	11	ISM	ENSG00000077254.14	ENST00000370794.7	4327	24	-24	29635	-24	-7598	5prime_fragment	FALSE	canonical	3	287	junction_10	55.9168132139163	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAACGTTTCTCTTATTC	NA	False	NA	NA	False	AAAAAG	-1	NA	77759876	77725621	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77759642
transcript_105454.known	chr19	-	370	5	FSM	ENSG00000161249.21	ENST00000470746.6	370	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	406.355370950108	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-35481314	True	NA	-3	True	AATAAA	-17	NA	35510436	35503303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35503448_35505717_35505766_35509910_35509962_35510183_35510253_35510378
transcript_105456.known	chr19	-	306	4	FSM	ENSG00000161249.21	ENST00000474992.5	306	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	418.550939419432	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-35481301	True	NA	-3	True	AATAAA	-17	NA	35510423	35503303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35503448_35505717_35505766_35510183_35510253_35510378
transcript_105457.known	chr19	-	877	12	FSM	ENSG00000161249.21	ENST00000467532.5	877	12	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_5	424.670801040286	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACGACTTTCTCAAATTTT	-35481313	True	NA	-5	True	AATAAA	-18	NA	35510435	35497222	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500377_35500420_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183_35510253_35510378
transcript_105458.known	chr19	-	577	5	FSM	ENSG00000161249.21	ENST00000474928.5	577	5	0	0	0	0	multi-exon	FALSE	canonical	3	719	junction_3	392.557241048997	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-35481347	True	NA	-3	True	AATAAA	-17	NA	35510469	35503303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35509910_35509962_35510183
transcript_105459.known	chr19	-	567	4	FSM	ENSG00000161249.21	ENST00000461300.5	567	4	0	0	0	0	multi-exon	FALSE	canonical	3	806	junction_3	413.505609259281	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-35481388	True	NA	-3	True	AATAAA	-17	NA	35510510	35503303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35510183
transcript_105460.known	chr19	-	449	3	FSM	ENSG00000161249.21	ENST00000476051.5	449	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	481	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-35481318	True	NA	-3	True	AATAAA	-17	NA	35510440	35503303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35503448_35505717_35505766_35510183
transcript_105461.known	chr19	-	691	8	FSM	ENSG00000161249.21	ENST00000488762.5	691	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	349.281069206624	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGACTTTCTCAAATTTTAT	-35481320	True	NA	-3	True	AATAAA	-20	NA	35510442	35497220	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35505717_35505766_35510183_35510253_35510378
transcript_105463.known	chr19	+	868	7	FSM	ENSG00000105677.12	ENST00000222284.10	868	7	0	0	0	0	multi-exon	FALSE	canonical	3	1818	junction_5	53.3166640616859	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGCCTCCATTTCTCT	35534720	True	NA	37	True	AGTAAA	-17	NA	35545625	35547526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35545817_35545887_35545958_35546525_35546586_35546671_35546809_35546944_35547030_35547118_35547241_35547323
transcript_105464.known	chr19	+	767	6	FSM	ENSG00000105677.12	ENST00000392205.2	767	6	0	0	0	0	multi-exon	FALSE	canonical	3	1818	junction_5	46.918653007093	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCAGCACTTTGGCCCTG	35534775	True	NA	-92	True	GGGGCT	-6	NA	35545680	35547397	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35545817_35545887_35545958_35546525_35546586_35546671_35546809_35546944_35547030_35547118
transcript_105466.known	chr19	+	986	6	FSM	ENSG00000105677.12	ENST00000477168.6	986	6	0	0	0	0	multi-exon	FALSE	canonical	3	1818	junction_4	57.8086498717969	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTTGCTGCCTCCATTT	35534734	True	NA	33	True	AGTAAA	-13	NA	35545639	35547522	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35545817_35545887_35545958_35546525_35546586_35546671_35547030_35547118_35547241_35547323
transcript_105469.known	chr19	+	1045	5	FSM	ENSG00000105677.12	ENST00000599895.1	1045	5	0	0	0	0	multi-exon	FALSE	canonical	3	1844	junction_1	48.411646326065	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGCCTCCATTTCTCT	35534768	True	NA	37	True	AGTAAA	-17	NA	35545673	35547526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35545817_35545887_35545958_35546525_35546586_35546671_35547241_35547323
transcript_105470.known	chr19	+	669	5	FSM	ENSG00000105677.12	ENST00000593027.6	669	5	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_3	771.034167530856	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTGCTGCCTCCATTTC	35534694	True	NA	34	True	AGTAAA	-14	NA	35545599	35547523	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35545817_35545887_35545958_35546525_35546586_35547118_35547241_35547323
transcript_105477.known	chr19	-	2204	4	FSM	ENSG00000236144.9	ENST00000660839.1	2204	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	58.8614191696621	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTAGTGGTGACGGGGTT	-35544931	False	NA	NA	False	NA	NA	NA	35545160	35540970	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35541585_35541750_35541929_35542910_35543274_35544111
transcript_105480.known	chr19	-	2640	4	FSM	ENSG00000236144.9	ENST00000660248.1	2640	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	55.0474542755814	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACCTGGCCTCGTGTTTT	-35542686	True	NA	-26	True	NA	NA	NA	35545515	35540859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35541585_35541750_35542075_35542910_35543098_35544111
transcript_105481.known	chr19	-	1421	4	FSM	ENSG00000236144.9	ENST00000444728.3	1547	4	4	122	4	0	multi-exon	FALSE	canonical	3	25	junction_3	47.7865624998865	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACCTGGCCTCGTGTTTT	-35542674	True	NA	-26	True	NA	NA	NA	35545503	35540859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35541585_35541750_35542075_35542910_35543098_35545318
transcript_105488.known	chr19	-	3499	3	FSM	ENSG00000236144.9	ENST00000667891.1	3499	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	59.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGGTGATCCCCACTTC	-35542734	True	NA	-83	True	NA	NA	NA	35545563	35540916	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35541585_35541750_35541929_35542910
transcript_10549.known	chr1	-	500	5	FSM	ENSG00000077254.14	ENST00000528150.1	500	5	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_2	176.441208338642	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGAACTCAGCCTTCATT	-77753922	True	NA	NA	False	NA	NA	NA	77759811	77739330	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_77739418_77740876_77740935_77741375_77741430_77741616_77741749_77759642
transcript_105490.known	chr19	-	3767	3	FSM	ENSG00000236144.9	ENST00000590717.2	3767	3	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_2	17	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGAAGTGCTACCGCTG	-35542678	True	NA	-22	True	ATTAAA	-23	NA	35545507	35540738	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35541585_35541750_35542075_35542910
transcript_105494.known	chr19	+	562	2	FSM	ENSG00000105677.12	ENST00000596232.1	562	2	0	0	0	0	multi-exon	FALSE	canonical	3	1844	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGACTCAGATGCCCTGT	35534746	True	NA	99	True	NA	NA	NA	35545651	35546284	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35545817_35545887
transcript_105497.known	chr19	-	3064	2	FSM	ENSG00000236144.9	ENST00000654809.1	3064	2	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCATTAAGTGAATAAACT	-35542697	True	NA	NA	False	ACTAAA	-39	NA	35545526	35541626	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35542075_35542910
transcript_105499.known	chr19	-	3911	1	FSM	ENSG00000236144.9	ENST00000588286.1	3911	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATGAGTAACCGGGTGC	-35542663	True	NA	NA	False	AATAAA	-28	NA	35545492	35541581	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35541600_35545500
transcript_105500.known	chr19	+	1448	11	FSM	ENSG00000105679.9	ENST00000222286.9	1448	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.00498756211209	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGTCCCGTATCTCTGC	NA	False	NA	NA	False	AATAAA	-15	NA	35533455	35545319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35533595_35536812_35536991_35538306_35538404_35538576_35538684_35542318_35542410_35542489_35542609_35542944_35543027_35543339_35543492_35543664_35543828_35544908_35545007_35545097
transcript_105501.known	chr19	+	935	6	FSM	ENSG00000105677.12	ENST00000392204.6	935	6	0	0	0	0	multi-exon	FALSE	canonical	3	1818	junction_4	52.0707211396193	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGCCTCCATTTCTCT	35534724	True	NA	37	True	AGTAAA	-17	NA	35545629	35547526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35545958_35546525_35546586_35546671_35546809_35546944_35547030_35547118_35547241_35547323
transcript_105502.known	chr19	+	1783	2	FSM	ENSG00000105677.12	ENST00000595467.1	1783	2	0	0	0	0	multi-exon	FALSE	canonical	3	1969	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTGCTGCCTCCATTTC	35534752	True	NA	34	True	AGTAAA	-14	NA	35545657	35547523	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35547241_35547323
transcript_105505.known	chr19	+	4324	19	FSM	ENSG00000249115.9	ENST00000203166.10	4324	19	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_6	16.9098006500577	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTATTTCCCTAGTTAAG	35609301	True	NA	NA	False	AATAAA	-27	NA	35612734	35625355	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35612893_35613729_35613793_35613867_35613901_35614034_35614060_35615041_35615148_35615226_35615387_35617123_35617194_35617286_35617370_35617854_35617913_35618070_35618196_35618401_35618466_35618568_35618700_35618886_35619050_35619423_35619505_35619612_35619759_35620011_35620124_35620194_35620328_35622600_35622734_35622875
transcript_105506.known	chr19	+	2762	18	FSM	ENSG00000249115.9	ENST00000585968.5	2762	18	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_6	16.6729169364437	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACAGTGTAGGTTGGGGGT	35609318	True	NA	-46	True	NA	NA	NA	35612751	35623557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35612893_35613729_35613793_35613867_35613901_35614034_35614060_35615041_35615148_35615226_35615387_35617123_35617194_35617286_35617370_35617854_35617913_35618070_35618196_35618401_35618466_35618568_35618700_35618886_35619050_35619423_35619505_35619612_35620124_35620194_35620328_35622600_35622734_35622875
transcript_105507.known	chr19	+	2758	17	FSM	ENSG00000249115.9	ENST00000587439.5	2758	17	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_10	48.0195272779731	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTATAGTTTCTTTTT	35609310	True	NA	6	True	ATTAAA	-18	NA	35612743	35623609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35612893_35613729_35613793_35613867_35613901_35614034_35614060_35615041_35615148_35615226_35615387_35617123_35617194_35617286_35617370_35617854_35617913_35618070_35618196_35618568_35618700_35618886_35619050_35619423_35619505_35619612_35620124_35620194_35620328_35622600_35622734_35622875
transcript_105509.known	chr19	+	1692	10	FSM	ENSG00000126254.12	ENST00000262633.9	1692	10	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_5	161.706028045255	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGGCTGGGCATGGAAG	35614587	True	NA	16	True	AATAAA	-17	NA	35629035	35637685	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35629282_35629519_35629674_35631139_35631225_35631330_35631406_35632935_35633002_35633076_35633253_35633686_35634020_35634255_35634374_35637157_35637353_35637441
transcript_105511.nnic	chr19	+	1700	10	NIC	ENSG00000126254.12	novel	1692	10	NA	NA	-23	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_5	251.569296837096	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGGCTGGGCATGGAAG	NA	False	NA	16	True	AATAAA	-17	NA	35629006	35637685	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_35629282_35629519_35629674_35631139_35631225_35631330_35631406_35632935_35633002_35633097_35633253_35633686_35634020_35634255_35634374_35637157_35637353_35637441
transcript_105515.known	chr19	+	1487	9	FSM	ENSG00000126254.12	ENST00000589871.1	1487	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	261.561148443342	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTGCCCCAAAACCAGTT	35614682	False	NA	-28	True	NA	NA	NA	35629130	35637641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35629282_35629519_35629674_35631139_35631225_35631330_35631406_35633076_35633253_35633686_35634020_35634255_35634374_35637157_35637353_35637441
transcript_105516.known	chr19	+	1609	9	FSM	ENSG00000126254.12	ENST00000588161.5	1609	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	258.271629055535	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGCTGGGCATGGAAGC	35614581	True	NA	17	True	AATAAA	-18	NA	35629029	35637686	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35629282_35629519_35629674_35631139_35631225_35631330_35631406_35633100_35633253_35633686_35634020_35634255_35634374_35637157_35637353_35637441
transcript_105522.known	chr19	+	771	5	FSM	ENSG00000126254.12	ENST00000586618.5	771	5	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_3	306.564022677156	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTGGCTGGGCATGGAA	35614619	True	NA	15	True	AATAAA	-16	NA	35629067	35637684	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35629282_35629519_35629674_35631139_35631197_35637249_35637353_35637441
transcript_105523.known	chr19	+	488	4	FSM	ENSG00000126267.11	ENST00000649813.2	488	4	0	0	0	0	multi-exon	FALSE	canonical	3	5835	junction_1	624.30174328338	1812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATGCGTGTGAACGGGC	35577077	True	NA	29	True	AATAAA	-19	NA	35648322	35658782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35648404_35651232_35651350_35654570_35654672_35658593
transcript_105527.known	chr19	+	290	2	FSM	ENSG00000126267.11	ENST00000590618.1	290	2	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGACTATGCGTGTGAAC	35651143	True	NA	25	True	AATAAA	-15	NA	35651244	35658778	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35651350_35658593
transcript_105528.known	chr19	+	1268	8	FSM	ENSG00000105668.7	ENST00000617999.4	1268	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	16.7539212589477	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGAGTTTTTTTTTTTCTG	NA	False	NA	NA	False	AATAAA	-22	NA	35666515	35678483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35666539_35666808_35666897_35668453_35668655_35673231_35673307_35673437_35673546_35675839_35676020_35677811_35677896_35677974
transcript_10553.known	chr1	+	5288	16	FSM	ENSG00000180488.16	ENST00000370791.8	6382	16	-25	1119	0	43	multi-exon	TRUE	canonical	3	17	junction_5	6.96148132384353	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATATGTAACGGTTTCCA	77778855	True	NA	NA	False	AGTAAA	-38	NA	77779623	77878421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_77779737_77783237_77783352_77801330_77801509_77803269_77803407_77806974_77807102_77813733_77813868_77815107_77815232_77843306_77843408_77858937_77859057_77859313_77859387_77860039_77860127_77861223_77861323_77863893_77864029_77866337_77866392_77873003_77873121_77874845
transcript_105531.nic	chr19	+	977	4	ISM	ENSG00000105668.7	ENST00000222275.2	1223	7	6529	-18	6529	0	3prime_fragment	FALSE	canonical	3	24	junction_1	7.1336448530109	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGAGTTTTTTTTTTTCTG	35672976	True	NA	NA	False	AATAAA	-22	NA	35673341	35678483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_35673546_35675839_35676020_35677811_35677896_35677974
transcript_105533.known	chr19	-	795	2	FSM	ENSG00000226510.2	ENST00000443196.2	808	2	13	0	13	0	multi-exon	FALSE	canonical	3	38	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGATGTGCACCTGTA	-35673118	True	NA	-13	True	AATAAA	-14	NA	35673291	35667947	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35668686_35673234
transcript_10555.known	chr1	+	1978	15	FSM	ENSG00000180488.16	ENST00000645756.1	1978	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_14	9.9121138007995	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCAGCTCACATTATTCC	77778861	True	NA	NA	False	AATAAA	-16	NA	77779629	77868636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_77779737_77783237_77783352_77801330_77801509_77803269_77803407_77806974_77807102_77813733_77813868_77815107_77815232_77843306_77843408_77858937_77859057_77859313_77859387_77860039_77860127_77861223_77861323_77863893_77864029_77866337_77866392_77868247
transcript_105553.known	chr19	-	765	6	FSM	ENSG00000161265.15	ENST00000378975.8	765	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	55.5099990992614	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTTTGCTGTGGTTTG	-35744521	True	NA	-5	True	AATAAA	-26	NA	35745418	35742526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35742804_35743808_35743905_35744011_35744146_35744322_35744422_35745124_35745213_35745347
transcript_105555.known	chr19	-	729	6	FSM	ENSG00000161265.15	ENST00000292879.9	729	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	53.5738742298893	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAACTTGCTTTTGCTGTG	NA	False	NA	-10	True	AATAAA	-21	NA	35745445	35742531	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35742804_35743808_35743905_35744069_35744146_35744322_35744422_35745124_35745213_35745347
transcript_105560.known	chr19	-	329	3	FSM	ENSG00000126246.10	ENST00000591748.1	329	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	46	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGGTATGGCCCATGGC	-35739652	False	897	NA	False	NA	NA	NA	35740549	35739527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35739627_35739709_35739770_35740379
transcript_105561.nic	chr19	-	1450	3	ISM	ENSG00000126246.10	ENST00000246532.6	1647	5	1828	0	-28	0	3prime_fragment	FALSE	canonical	3	73	junction_2	18.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGGATTTAGAAACCTTT	-35739727	False	NA	-12	True	AATAAA	-16	NA	35740624	35738800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_35739627_35739709_35740089_35740379
transcript_105563.nic	chr19	-	997	3	ISM	ENSG00000126246.10	ENST00000592537.5	1195	5	1823	0	-28	0	3prime_fragment	FALSE	canonical	3	73	junction_2	18.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGCCCAGTATACAATTA	-35739727	False	NA	-26	True	AATAAA	-16	NA	35740624	35739253	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_35739627_35739709_35740089_35740379
transcript_105565.known	chr19	-	482	2	FSM	ENSG00000126246.10	ENST00000587101.1	482	2	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCGGAGTCCCCAACACC	-35739699	False	897	NA	False	NA	NA	NA	35740596	35739823	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35740089_35740379
transcript_105567.known	chr19	+	935	9	FSM	ENSG00000267796.8	ENST00000301159.14	935	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	7.70957197255464	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTCTGCTCCGGTCCC	35748239	True	NA	4	True	AGTAAA	-18	NA	35748575	35754519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35748759_35752175_35752252_35752433_35752485_35752803_35752834_35752913_35753000_35753086_35753254_35754016_35754158_35754245_35754320_35754392
transcript_105572.nnic	chr19	+	474	5	NNC	ENSG00000205155.8	novel	1124	4	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	492.774479351356	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACTGACTTCCTGGGATC	35741924	True	NA	19	True	AATAAA	-15	NA	35745628	35747002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_35745701_35745834_35745992_35746418_35746524_35746707_35746756_35746910
transcript_105576.known	chr19	+	1124	4	FSM	ENSG00000205155.8	ENST00000587708.7	1124	4	0	0	0	0	multi-exon	FALSE	canonical	3	902	junction_1	150.169533823905	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCCTTGACCATCCATC	35741946	True	NA	22	True	AATAAA	-26	NA	35745650	35747519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35745701_35745834_35745992_35746418_35746524_35746707
transcript_105577.known	chr19	+	603	4	FSM	ENSG00000205155.8	ENST00000222266.2	603	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	538.453959653624	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGACTTCCTGGGATCTT	35741914	True	NA	21	True	AATAAA	-17	NA	35745618	35747004	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35745701_35745872_35745992_35746418_35746524_35746707
transcript_105579.known	chr19	+	833	3	FSM	ENSG00000205155.8	ENST00000591949.1	833	3	0	0	0	0	multi-exon	FALSE	canonical	3	902	junction_1	182.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACTTTCGATACTGACTT	35741895	True	NA	10	True	AATAAA	-6	NA	35745599	35746993	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35745701_35745834_35745992_35746418
transcript_105582.known	chr19	+	772	5	FSM	ENSG00000167595.15	ENST00000537459.5	772	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	11.409973707244	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAACCA	35755903	True	NA	NA	False	ACTAAA	-15	NA	35758193	35762563	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35758227_35759373_35759471_35759788_35759992_35762018_35762147_35762252
transcript_105583.known	chr19	+	1266	5	FSM	ENSG00000167595.15	ENST00000536950.5	1266	5	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_1	8.30662386291807	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAGAGCTGATCCCCATT	35755888	True	NA	NA	False	AAAAAG	-1	NA	35758178	35763045	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35758227_35759373_35759471_35759788_35759992_35762018_35762147_35762255
transcript_105587.known	chr19	+	3858	21	FSM	ENSG00000004777.19	ENST00000314737.9	3858	21	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_6	15.6952222029508	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGAAGTCGTTCTGGG	35775118	True	NA	20	True	AATAAA	-15	NA	35775574	35788822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35775665_35777644_35777743_35777823_35777909_35778279_35778361_35778463_35778602_35779031_35779125_35780210_35780334_35780420_35780499_35780581_35780649_35780756_35780817_35780919_35781073_35781149_35781253_35782372_35782518_35782596_35782680_35782761_35782870_35784171_35784318_35784952_35785107_35785188_35785335_35785408_35785484_35786895_35787073_35787167
transcript_105588.known	chr19	+	4219	21	FSM	ENSG00000004777.19	ENST00000378944.9	4219	21	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	17.5222002043122	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGAAGTCGTTCTGGG	35775058	True	NA	20	True	AATAAA	-15	NA	35775514	35788822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35775665_35777823_35777909_35778279_35778361_35778463_35778602_35779031_35779125_35780210_35780334_35780420_35780499_35780581_35780649_35780756_35780817_35780919_35781073_35781149_35781253_35782372_35782518_35782596_35782680_35782761_35782870_35784171_35784318_35784952_35785107_35785188_35785335_35785408_35785484_35786412_35787073_35787167_35787560_35787643
transcript_105599.known	chr19	-	5535	29	FSM	ENSG00000161270.20	ENST00000378910.10	5535	29	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	2.1556167733318	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCATAATAACAGCCCAGT	NA	False	NA	1	True	AATAAA	-19	NA	35852504	35825371	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35826646_35830843_35830957_35831052_35831147_35831295_35831372_35831475_35831501_35831642_35831763_35835704_35835762_35839236_35839419_35839495_35839608_35841714_35841867_35842123_35842281_35842378_35842551_35843471_35843594_35844102_35844244_35844318_35844460_35845367_35845541_35845668_35845799_35846007_35846195_35848040_35848166_35848252_35848398_35848636_35848795_35848975_35849148_35849235_35849364_35849549_35849654_35850363_35850446_35850960_35851090_35851261_35851385_35851456_35851673_35851779
transcript_105602.known	chr19	+	2370	17	FSM	ENSG00000105290.13	ENST00000221891.9	2370	17	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_12	34.2558731278302	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGTCTGAGTCTCTGTG	35868284	True	NA	6	True	AATAAA	-17	NA	35868573	35879792	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35868784_35869666_35869811_35870895_35871029_35871236_35871350_35871611_35871746_35871857_35872037_35872482_35872614_35873638_35873714_35874503_35874663_35874740_35874870_35876516_35876617_35877717_35877826_35878081_35878109_35878583_35878655_35878889_35878953_35879073_35879218_35879342
transcript_105603.known	chr19	+	2342	17	FSM	ENSG00000105290.13	ENST00000652533.1	2342	17	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	27.183907808665	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCCAGTCTGAGTCTCT	35868306	True	NA	3	True	AATAAA	-14	NA	35868595	35879789	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35868784_35869666_35869811_35870895_35871029_35871236_35871350_35871611_35871746_35871857_35872037_35872482_35872614_35873638_35873714_35874503_35874663_35874740_35874870_35876516_35876617_35877717_35877826_35878084_35878109_35878583_35878655_35878889_35878953_35879073_35879218_35879342
transcript_105606.nnic	chr19	+	3309	16	NNC	ENSG00000126259.20	novel	2980	15	NA	NA	-4492	0	intron_retention	TRUE	canonical	2	8	junction_1	8.32239281830786	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTCTTAGGGAGTCTAC	NA	False	NA	11	True	AATAAA	-19	NA	35851368	35867136	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_35851724_35856936_35857181_35857344_35857495_35858407_35858558_35858703_35858865_35859480_35859632_35860296_35860403_35860518_35860668_35860908_35861037_35861121_35861255_35861540_35861642_35861804_35862025_35862492_35862598_35862926_35863037_35864647_35864714_35866156
transcript_10561.nic	chr1	+	914	6	ISM	ENSG00000162614.19	ENST00000401035.7	1263	9	-247	6900	-247	-6900	5prime_fragment	FALSE	canonical	3	25	junction_3	2.60768096208106	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTTTGAGGATCTAGAAA	NA	False	NA	-51	True	TATAAA	-21	NA	77888265	77926484	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_77888760_77916054_77916134_77917959_77918039_77918124_77918274_77925187_77925230_77926413
transcript_105614.nnic	chr19	+	2072	16	NNC	ENSG00000105290.13	novel	1179	8	NA	NA	59	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	36.4267301121946	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGTCTGAGTCTCTGTG	35870223	False	NA	6	True	AATAAA	-17	NA	35870242	35879792	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_35870302_35870895_35871029_35871236_35871350_35871611_35871746_35871857_35872037_35872482_35872614_35873638_35873714_35874503_35874663_35874740_35874870_35876516_35876617_35877717_35877826_35878084_35878109_35878583_35878655_35878889_35878953_35879073_35879218_35879342
transcript_105616.nnic	chr19	+	2418	16	NNC	ENSG00000105290.13	novel	1179	8	NA	NA	62	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	34.9034223091216	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGTCTGAGTCTCTGTG	35870226	False	NA	6	True	AATAAA	-17	NA	35870245	35879792	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_35870651_35870895_35871029_35871236_35871350_35871611_35871746_35871857_35872037_35872482_35872614_35873638_35873714_35874503_35874663_35874740_35874870_35876516_35876617_35877717_35877826_35878084_35878109_35878583_35878655_35878889_35878953_35879073_35879218_35879342
transcript_105619.nnic	chr19	+	2274	16	NNC	ENSG00000105290.13	novel	1179	8	NA	NA	126	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	35.8500581124587	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGTCTGAGTCTCTGTG	35870262	False	NA	6	True	AATAAA	-17	NA	35870309	35879792	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_35870571_35870895_35871029_35871236_35871350_35871611_35871746_35871857_35872037_35872482_35872614_35873638_35873714_35874503_35874663_35874740_35874870_35876516_35876617_35877717_35877826_35878084_35878109_35878583_35878655_35878889_35878953_35879073_35879218_35879342
transcript_105620.nnic	chr19	+	3204	15	NNC	ENSG00000126259.20	novel	2980	15	NA	NA	-4492	0	intron_retention	FALSE	canonical	2	7	junction_12	10.1591920777919	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTCTTAGGGAGTCTAC	NA	False	NA	11	True	AATAAA	-19	NA	35851368	35867136	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_35851724_35856936_35857181_35857344_35857495_35858407_35858558_35858703_35858865_35859480_35859632_35860296_35860403_35860518_35860668_35860908_35861037_35861121_35861255_35861540_35861642_35861804_35862025_35862926_35863037_35864647_35864714_35866156
transcript_105637.known	chr19	+	2980	15	FSM	ENSG00000126259.20	ENST00000360202.10	2980	15	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_9	6.37757551015706	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTCTTAGGGAGTCTAC	35856802	True	NA	11	True	AATAAA	-19	NA	35856910	35867136	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35857181_35857344_35857495_35858407_35858558_35858703_35858865_35859480_35859632_35860296_35860403_35860518_35860668_35860908_35861037_35861121_35861255_35861540_35861642_35861804_35862025_35862492_35862598_35862926_35863037_35864647_35864714_35866156
transcript_105638.known	chr19	-	1834	12	FSM	ENSG00000167604.15	ENST00000396901.5	1834	12	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_11	6.14023446937028	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCGTTCCCAGAAACCCAG	NA	False	NA	NA	False	NA	NA	NA	35900650	35888240	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_35888613_35889889_35890055_35890373_35890491_35895979_35896129_35896217_35896270_35896391_35896539_35896725_35896832_35896912_35897059_35897650_35897857_35898471_35898533_35898718_35898823_35900441
transcript_105666.known	chr19	+	445	4	FSM	ENSG00000126264.10	ENST00000437550.2	445	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	4.08248290463863	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTAGTCGTATTCTTTCTC	35902448	True	NA	10	True	AATAAA	-14	NA	35902537	35904270	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35902637_35903350_35903417_35903771_35903904_35904122
transcript_105667.known	chr19	+	4690	3	FSM	ENSG00000126243.9	ENST00000246529.4	4690	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	23.5	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGCAGTGTTAGGGGGTC	35935649	True	NA	4	True	AATAAA	-19	NA	35936373	35946624	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35937556_35939409_35940841_35944547
transcript_105669.known	chr19	+	1125	1	FSM	ENSG00000205138.4	ENST00000378887.4	1125	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCTGTTGGTGGTCTTA	35992935	True	NA	4	True	AATAAA	-17	NA	35995187	35996312	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_35995200_35996300
transcript_105673.known	chr19	-	955	8	FSM	ENSG00000239382.11	ENST00000252984.11	955	8	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_7	99.5510329593084	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGCTCCCCTGGGTTATT	-36010079	True	NA	-94	True	GGGGCT	-35	NA	36014227	36009204	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36009554_36010566_36010684_36010893_36011046_36011403_36011465_36013020_36013090_36013343_36013423_36013513_36013589_36014174
transcript_105674.nnic	chr19	-	1223	7	NIC	ENSG00000181392.17	novel	1377	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	39	junction_6	82.0861674637627	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGTGAAGATACTAGG	-36004665	False	4148	-35	True	AATAAA	-15	NA	36008813	36003309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_36003521_36003612_36003672_36005332_36005438_36006422_36006672_36006749_36006945_36007124_36007269_36008553
transcript_105677.nic	chr19	-	940	7	NIC	ENSG00000239382.11	novel	959	8	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_2	86.0832929977318	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTGGTTTTATATTTT	-36010096	True	NA	-13	True	AATAAA	-11	NA	36014244	36009123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_36009554_36010566_36010646_36010893_36011046_36011403_36011465_36013020_36013090_36013343_36013423_36014174
transcript_105679.known	chr19	-	973	7	FSM	ENSG00000239382.11	ENST00000378875.8	951	7	-26	4	0	0	multi-exon	FALSE	canonical	3	174	junction_2	48.6860691916418	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTGGTTTTATATTTT	-36010091	True	NA	-13	True	AATAAA	-11	NA	36014239	36009123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36009554_36010566_36010684_36010893_36011046_36011403_36011465_36013020_36013090_36013343_36013423_36014174
transcript_105681.known	chr19	-	977	7	FSM	ENSG00000239382.11	ENST00000490986.5	977	7	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	86.6071911307344	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGTTTTATATTTTTAT	-36010060	True	NA	-10	True	AATAAA	-14	NA	36014208	36009120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36009554_36010566_36010684_36010893_36011078_36011403_36011465_36013020_36013090_36013343_36013423_36014174
transcript_1057.known	chr1	-	796	2	FSM	ENSG00000205090.9	ENST00000624426.1	796	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGCATGTGTGTGGCGTCT	-1540260	False	NA	-5	True	AATAAA	-16	NA	1540350	1539055	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1539791_1540289
transcript_105700.nic	chr19	-	3102	4	NIC	ENSG00000239382.11	novel	725	6	NA	NA	-5	0	intron_retention	FALSE	canonical	3	198	junction_3	44.7536466546458	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTGGTTTTATATTTT	-36010096	True	NA	-13	True	AATAAA	-11	NA	36014244	36009123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_36009554_36010566_36013090_36013343_36013423_36014174
transcript_105703.known	chr19	-	3326	3	FSM	ENSG00000239382.11	ENST00000471323.1	3326	3	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_2	51.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGGTTTTATATTTTTA	-36010064	True	NA	-11	True	AATAAA	-13	NA	36014212	36009121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36009554_36010566_36013423_36014174
transcript_105704.known	chr19	-	1377	8	FSM	ENSG00000181392.17	ENST00000324444.9	1377	8	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_4	64.5742730094105	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGAAGATACTAGGTGC	-36004665	False	4148	-32	True	AATAAA	-18	NA	36008813	36003306	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36003521_36003612_36003672_36005332_36005438_36006422_36006672_36006749_36006945_36007124_36007269_36008216_36008368_36008553
transcript_105705.known	chr19	-	861	6	FSM	ENSG00000239382.11	ENST00000490483.5	861	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	129.001705415084	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGTTTTATATTTTTAT	-36010035	True	NA	-10	True	AATAAA	-14	NA	36014183	36009120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36009554_36010566_36010684_36010893_36011066_36011403_36011465_36013020_36013090_36014174
transcript_105706.known	chr19	-	1004	6	FSM	ENSG00000181392.17	ENST00000340477.9	1004	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	94.0799659863884	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGTGAAGATACTAGG	-36004634	False	4148	-35	True	AATAAA	-15	NA	36008782	36003309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36003521_36003612_36003672_36005332_36005438_36006422_36006672_36008216_36008368_36008553
transcript_10571.known	chr1	-	6714	20	FSM	ENSG00000162613.17	ENST00000370768.7	6714	20	0	0	0	0	multi-exon	TRUE	canonical	3	195	junction_16	159.531307984191	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGGAGTGCTTTGTGTTT	-77964775	True	NA	91	True	AATAAA	-20	NA	77979072	77944054	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_77948775_77949154_77949301_77955254_77955330_77956571_77956701_77960183_77960264_77960343_77960496_77962769_77962931_77963573_77963716_77964061_77964163_77964253_77964357_77964645_77964748_77964869_77964969_77965068_77965232_77966693_77966752_77966883_77966956_77967048_77967102_77967626_77967667_77968164_77968204_77969924_77970016_77978884
transcript_105710.known	chr19	+	4655	32	FSM	ENSG00000075702.19	ENST00000680590.1	4655	32	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_22	62.1784883385786	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTCCTGGTGTCTGTTTG	36048504	True	NA	12	True	AATAAA	-18	NA	36054896	36105108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36055149_36058779_36058872_36059967_36060031_36065957_36066016_36066256_36066428_36067305_36067444_36067827_36068011_36071555_36071717_36073341_36073532_36081432_36081571_36083062_36083189_36084652_36084745_36086686_36086813_36089037_36089106_36089184_36089307_36090444_36090521_36091199_36091312_36091401_36091466_36092688_36092812_36094030_36094165_36097026_36097080_36099398_36099618_36100751_36100876_36101213_36101318_36101663_36101775_36102013_36102152_36102751_36102852_36102947_36103075_36103155_36103208_36103342_36103982_36104517_36104676_36104767
transcript_105711.known	chr19	+	4634	32	FSM	ENSG00000075702.19	ENST00000270301.12	4634	32	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	56.9334277249122	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGGTTCCTGGTGTCTGT	36048579	False	NA	9	True	AATAAA	-15	NA	36054971	36105105	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36055149_36058779_36058872_36059967_36060031_36065957_36066016_36066256_36066428_36067305_36067444_36067827_36068011_36071555_36071717_36073341_36073532_36081432_36081571_36083062_36083242_36084652_36084745_36086686_36086813_36089037_36089106_36089184_36089307_36090444_36090521_36091199_36091312_36091401_36091466_36092688_36092812_36094030_36094165_36097026_36097080_36099398_36099618_36100747_36100876_36101213_36101318_36101663_36101775_36102013_36102152_36102751_36102852_36102947_36103075_36103155_36103208_36103342_36103982_36104517_36104676_36104767
transcript_105724.known	chr19	+	4478	30	FSM	ENSG00000075702.19	ENST00000680564.1	4478	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	66.1528694790268	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTCCTGGTGTCTGTTTG	36048504	True	NA	12	True	AATAAA	-18	NA	36054896	36105108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36055149_36058779_36058872_36059967_36060031_36065957_36066016_36066256_36066428_36067305_36067444_36067827_36068011_36071555_36071717_36073341_36073532_36081432_36081571_36083062_36083242_36084652_36084745_36086686_36086813_36089037_36089106_36089184_36089307_36090444_36090521_36091199_36091312_36091401_36091466_36092688_36092812_36094030_36094165_36097026_36097080_36099398_36099618_36100747_36100876_36101213_36101318_36102736_36102852_36102947_36103075_36103155_36103208_36103342_36103982_36104517_36104676_36104767
transcript_105726.known	chr19	+	4339	30	FSM	ENSG00000075702.19	ENST00000679757.1	4339	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	62.7249435977906	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAATGGTTCCTGGTGTCTG	36048537	True	NA	8	True	AATAAA	-14	NA	36054929	36105104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36055149_36058779_36058872_36059967_36060031_36065957_36066016_36066256_36066428_36067305_36067444_36067827_36068011_36081432_36081571_36083062_36083242_36084652_36084745_36086686_36086813_36089037_36089106_36089184_36089307_36090444_36090521_36091199_36091312_36091401_36091466_36092688_36092812_36094030_36094165_36097026_36097080_36099398_36099618_36100747_36100876_36101213_36101318_36101663_36101775_36102013_36102152_36102736_36102852_36102947_36103075_36103155_36103208_36103342_36103982_36104517_36104676_36104767
transcript_105742.nnic	chr19	+	3210	21	NNC	ENSG00000075702.19	novel	4478	30	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	78.2242130033917	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAATGGTTCCTGGTGTCTG	36048485	True	NA	8	True	AATAAA	-14	NA	36054877	36105104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_36055149_36058779_36058872_36059967_36060031_36065957_36066016_36066256_36066428_36067305_36067444_36067827_36068011_36071555_36071717_36073341_36073532_36081432_36081571_36083062_36083242_36084652_36084745_36086686_36086813_36089037_36089106_36089184_36089307_36090444_36090521_36091199_36091312_36091401_36091405_36103509_36103982_36104517_36104676_36104767
transcript_105744.known	chr19	+	2987	19	FSM	ENSG00000075702.19	ENST00000680489.1	2987	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	55.7645236576574	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGTATTAAAGTGGAAAAG	36054598	False	NA	NA	False	NA	NA	NA	36054648	36093142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36055149_36058779_36058872_36059967_36060031_36065957_36066016_36066256_36066428_36067305_36067444_36067827_36068011_36071555_36071717_36073341_36073532_36081432_36081571_36083062_36083242_36084652_36084745_36086686_36086813_36089037_36089106_36089184_36089307_36090444_36090521_36091199_36091312_36091401_36091466_36092688
transcript_105760.known	chr19	-	3350	14	FSM	ENSG00000105270.15	ENST00000360535.9	3350	14	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_12	5.24206924227718	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTGTCGGGTCATTGG	-36032162	True	NA	-4	True	AATAAA	-16	NA	36032873	36014659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36016213_36016906_36016980_36017385_36017451_36017654_36017779_36017847_36017992_36018897_36019027_36019170_36019307_36024395_36024633_36026146_36026266_36026585_36026748_36026951_36027046_36027131_36027272_36032191_36032416_36032723
transcript_105765.known	chr19	+	1980	10	FSM	ENSG00000075702.19	ENST00000378860.8	1980	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	74.2534864293494	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAAAAAGTTTTGA	36048488	True	NA	NA	False	NA	NA	NA	36054880	36074304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36055149_36058779_36058872_36059967_36060031_36065957_36066016_36066256_36066428_36067305_36067444_36067827_36068011_36071555_36071717_36073341_36073532_36073648
transcript_105766.known	chr19	+	643	4	FSM	ENSG00000267698.2	ENST00000586962.1	643	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	10.8730042868667	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATAAAGGGAGAAATAAGA	36013909	True	NA	NA	False	NA	NA	NA	36014507	36045972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36014587_36016811_36016961_36019233_36019385_36045708
transcript_105768.nnic	chr19	+	2420	4	NNC	ENSG00000075702.19	novel	2976	3	NA	NA	-1	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	111.505854355525	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTAATCAAATAAATACTTC	36048503	True	NA	NA	False	NA	NA	NA	36054895	36062675	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_36055149_36058779_36058872_36059967_36061989_36062621
transcript_105769.known	chr19	-	1349	4	FSM	ENSG00000161277.11	ENST00000292894.2	1349	4	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_3	19.4821855949366	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGATGAGTGCTATAAAGAC	-36054275	False	1046	-1	True	AATAAA	-21	NA	36054285	36034983	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36035593_36039322_36039719_36039943_36040137_36054134
transcript_105771.nic	chr19	-	1297	4	NIC	ENSG00000161277.11	novel	1349	4	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_3	46.5044800709208	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGATGAGTGCTATAAAGAC	-36054437	False	NA	-1	True	AATAAA	-21	NA	36054447	36034983	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_36035593_36039322_36039719_36039943_36040137_36054348
transcript_105772.known	chr19	+	2976	3	FSM	ENSG00000075702.19	ENST00000608676.2	2976	3	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_1	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACTTAATCAAA	36048570	True	NA	NA	False	NA	NA	NA	36054962	36062665	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36055149_36058779_36058872_36059967
transcript_105774.known	chr19	-	1084	3	FSM	ENSG00000161277.11	ENST00000522483.2	1084	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	61.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATACCTGGTTCTAAGGA	-36053331	True	NA	NA	False	NA	NA	NA	36054377	36035147	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36035593_36039322_36039719_36054134
transcript_105778.known	chr19	+	875	6	FSM	ENSG00000105254.12	ENST00000585746.1	875	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	645.153439113518	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTAGAGGACTTCATGA	36115818	False	NA	37	True	ATTAAA	-20	NA	36115837	36125945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36115929_36116040_36116185_36120709_36120807_36121526_36121719_36125450_36125524_36125667
transcript_10578.nic	chr1	-	1088	11	ISM	ENSG00000162613.17	ENST00000294623.8	2201	21	-127	17831	-104	756	5prime_fragment	FALSE	canonical	3	571	junction_7	62.6805392446491	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAGAGATGATCAAAAAAA	-77979106	False	NA	-7	True	AAGAAA	-1	NA	77979214	77964312	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_77964357_77964645_77964748_77964869_77964969_77965068_77965232_77966693_77966752_77966883_77966956_77967048_77967099_77967626_77967667_77968164_77968204_77969924_77970016_77978884
transcript_105782.known	chr19	-	493	6	FSM	ENSG00000105258.9	ENST00000592962.5	493	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	895.113043140362	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGAGTTTTCTGTGTTT	-36101595	True	NA	-9	True	AATAAA	-13	NA	36114906	36113715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36113818_36114014_36114067_36114150_36114252_36114338_36114413_36114658_36114714_36114797
transcript_105783.known	chr19	-	443	6	FSM	ENSG00000105258.9	ENST00000221859.9	443	6	0	0	0	0	multi-exon	FALSE	canonical	3	2086	junction_1	89.8563297714746	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTGTGTTTATTTGCC	-36101564	True	NA	-2	True	AATAAA	-20	NA	36114875	36113708	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36113818_36114014_36114067_36114176_36114252_36114338_36114413_36114658_36114714_36114797
transcript_105784.known	chr19	-	744	6	FSM	ENSG00000105258.9	ENST00000586439.1	744	6	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_5	902.639374279673	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCCATGCGTGAGTTTT	-36112704	True	NA	-17	True	AATAAA	-5	NA	36115213	36113723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36113818_36114014_36114067_36114176_36114252_36114338_36114413_36114658_36114714_36114819
transcript_105787.known	chr19	-	368	5	FSM	ENSG00000105258.9	ENST00000585842.5	368	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	969.314448463449	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGAGTTTTCTGTGTTTAT	-36101549	True	NA	-7	True	AATAAA	-15	NA	36114860	36113713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36113818_36114014_36114067_36114176_36114252_36114338_36114413_36114797
transcript_105788.known	chr19	-	993	5	FSM	ENSG00000105258.9	ENST00000586789.5	993	5	0	0	0	0	multi-exon	FALSE	canonical	3	2086	junction_1	97.2329676601511	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCATGCGTGAGTTTTC	-36112684	True	NA	-16	True	AATAAA	-6	NA	36115193	36113722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36113818_36114014_36114067_36114176_36114252_36114338_36114714_36114797
transcript_105789.known	chr19	-	542	5	FSM	ENSG00000105258.9	ENST00000589591.5	542	5	0	0	0	0	multi-exon	FALSE	canonical	3	2086	junction_1	98.8366708261665	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTCTGTGTTTATTTGC	-36101580	True	NA	-3	True	AATAAA	-19	NA	36114891	36113709	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36113818_36114014_36114067_36114176_36114252_36114338_36114413_36114658
transcript_105790.known	chr19	+	987	6	FSM	ENSG00000105254.12	ENST00000221855.8	987	6	0	0	0	0	multi-exon	FALSE	canonical	3	1478	junction_2	77.6649212965545	1274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTATTTAGAGGACTTC	36106791	True	NA	33	True	ATTAAA	-16	NA	36115467	36125941	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36115675_36116040_36116185_36120709_36120807_36121526_36121719_36125450_36125524_36125667
transcript_105791.known	chr19	+	1067	7	FSM	ENSG00000105254.12	ENST00000651435.1	1067	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	751.504213782819	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTAGAGGACTTCATGA	36106829	True	NA	37	True	ATTAAA	-20	NA	36115505	36125945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36115675_36116040_36116185_36120709_36120807_36121526_36121719_36124249_36124364_36125450_36125524_36125667
transcript_105798.known	chr19	+	1509	11	FSM	ENSG00000126247.11	ENST00000628018.2	1509	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	235.714424675284	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATCTGCCTCCTGATCT	36139986	False	NA	24	True	AATAAA	-24	NA	36140014	36150353	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36140158_36140996_36141221_36142299_36142334_36142651_36142742_36142908_36142967_36143063_36143129_36145775_36145875_36145975_36146055_36146195_36146313_36149577_36149637_36149812
transcript_105799.nic	chr19	+	1475	11	NIC	ENSG00000126247.11	novel	1471	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	186.160146110815	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGATCTGCCTCCTGATC	36139986	False	NA	23	True	AATAAA	-23	NA	36140014	36150352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_36140158_36140999_36141221_36142299_36142334_36142651_36142742_36142908_36142967_36143063_36143129_36145805_36145875_36145975_36146055_36146195_36146313_36149577_36149637_36149812
transcript_105800.known	chr19	+	1428	11	FSM	ENSG00000126247.11	ENST00000246533.8	1428	11	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_1	149.809746011399	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATCTGCCTCCTGATCT	36131215	True	NA	24	True	AATAAA	-24	NA	36140065	36150353	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36140158_36140996_36141221_36142299_36142334_36142651_36142742_36142908_36142967_36143063_36143129_36145805_36145875_36145975_36146055_36146195_36146313_36149577_36149637_36149812
transcript_105801.known	chr19	+	1471	11	FSM	ENSG00000126247.11	ENST00000588815.5	1471	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	209.051405161506	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGATCTGCCTCCTGATC	36131276	True	NA	23	True	AATAAA	-23	NA	36140126	36150352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36140266_36140999_36141221_36142299_36142334_36142651_36142742_36142908_36142967_36143063_36143129_36145805_36145875_36145975_36146055_36146195_36146313_36149577_36149637_36149812
transcript_105803.nic	chr19	+	1207	10	NIC	ENSG00000126247.11	novel	570	8	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	211.509915711875	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGATCTGCCTCCTGATC	36141561	True	NA	23	True	AATAAA	-23	NA	36141587	36150352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_36141684_36142299_36142334_36142651_36142742_36142908_36142967_36143063_36143129_36145805_36145875_36145975_36146055_36146195_36146313_36149577_36149637_36149812
transcript_105806.known	chr19	-	340	4	FSM	ENSG00000161281.11	ENST00000292907.8	340	4	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGTGTTTGTGTC	-36152145	False	NA	NA	False	AATAAA	-13	NA	36152447	36150921	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36151035_36151461_36151547_36151668_36151756_36152392
transcript_105807.nnic	chr19	+	3489	5	NNC	ENSG00000167635.12	novel	3347	4	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_2	478.57105010646	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAATCTGTTTTAATTAT	36206164	True	NA	16	True	ATTAAA	-20	NA	36215083	36238768	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_36215197_36218121_36218196_36225953_36226074_36228747_36228820_36235658
transcript_105808.known	chr19	+	3347	4	FSM	ENSG00000167635.12	ENST00000443387.3	3347	4	0	0	0	0	multi-exon	FALSE	canonical	3	479	junction_1	321.45951879237	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAATCTGTTTTAATTAT	36206186	True	NA	16	True	ATTAAA	-20	NA	36215105	36238768	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36215197_36218121_36218196_36228747_36228820_36235658
transcript_105809.nnic	chr19	+	3317	4	NIC	ENSG00000167635.12	novel	3347	4	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	96	junction_1	471.780551622138	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAATCTGTTTTAATTAT	36206175	True	NA	16	True	ATTAAA	-20	NA	36215094	36238768	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_36215156_36218121_36218196_36228747_36228820_36235658
transcript_105811.known	chr19	+	565	3	FSM	ENSG00000167635.12	ENST00000586094.5	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_1	453	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTCATATGTTGCATTTC	36206186	True	NA	NA	False	NA	NA	NA	36215105	36236060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36215197_36228747_36228820_36235658
transcript_105812.known	chr19	+	533	3	FSM	ENSG00000167635.12	ENST00000591063.5	533	3	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	541	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACTCATATGTTGCATTT	36206176	True	NA	NA	False	NA	NA	NA	36215095	36236059	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36215156_36228747_36228820_36235658
transcript_105814.known	chr19	-	1799	5	FSM	ENSG00000196357.12	ENST00000304116.10	1799	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	5.3851648071345	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTAAGCATCAGATAATCT	-36214337	True	NA	8	True	AATAAA	-32	NA	36214665	36182275	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36183734_36194232_36194329_36195029_36195157_36201976_36202051_36214621
transcript_105822.known	chr19	-	1581	7	FSM	ENSG00000232677.10	ENST00000658126.2	1581	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	311.553856589123	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTTGGCAAAGTCATTT	-36315068	True	NA	-31	True	NA	NA	NA	36331662	36313093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36313913_36315956_36316071_36321299_36321358_36321992_36322031_36322129_36322226_36330252_36330493_36331446
transcript_105826.known	chr19	-	1003	6	FSM	ENSG00000232677.10	ENST00000449434.8	1019	6	0	16	0	-10	multi-exon	FALSE	canonical	3	105	junction_4	326.427327287407	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTGGGCTGGAATAGG	-36315159	True	NA	-14	True	ATTAAA	-16	NA	36331753	36313076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36313323_36315956_36316071_36321299_36321358_36321992_36322031_36330252_36330493_36331446
transcript_105828.known	chr19	-	1571	6	FSM	ENSG00000232677.10	ENST00000659786.2	1571	6	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_4	318.210873478579	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGTGTTTATTGACTC	-36315140	True	NA	NA	False	GGGGCT	-2	NA	36331734	36315219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36316071_36321299_36321358_36321992_36322031_36322129_36322226_36330252_36330493_36331446
transcript_105829.known	chr19	-	1749	6	FSM	ENSG00000232677.10	ENST00000590622.5	1749	6	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	326.633372452969	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATAGCTTACAGTCTTT	-36315124	True	NA	-10	True	AATAAA	-10	NA	36331718	36319715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36320761_36321299_36321358_36321992_36322031_36322129_36322226_36330252_36330493_36331446
transcript_10583.known	chr1	+	3778	6	FSM	ENSG00000137960.6	ENST00000370759.4	3778	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	4.51663591625449	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTTAGTCCCATGTTA	78045656	True	NA	NA	False	AGTAAA	-2	NA	78045965	78138444	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_78046335_78080674_78080861_78094951_78095133_78119392_78119500_78125880_78125963_78135591
transcript_105840.known	chr19	-	2310	4	FSM	ENSG00000232677.10	ENST00000656137.1	2310	4	0	0	0	0	multi-exon	FALSE	canonical	2	29	junction_1	400.587346557804	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCATGTGTCTCAAAGTG	-36315145	True	NA	-20	True	AATAAA	-6	NA	36331739	36324923	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36325765_36326289_36327226_36330252_36330493_36331446
transcript_105842.known	chr19	-	2540	4	FSM	ENSG00000232677.10	ENST00000658991.1	2540	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	407.520415303195	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTCATGTGTCTCAAAG	-36315140	True	NA	-22	True	AATAAA	-4	NA	36331734	36324925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36325765_36326052_36327226_36330252_36330493_36331446
transcript_105843.known	chr19	-	2111	4	FSM	ENSG00000232677.10	ENST00000668768.1	2111	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	393.500811802071	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTCATGTGTCTCAAAG	-36315140	True	NA	-22	True	AATAAA	-4	NA	36331734	36324925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36325765_36326481_36327226_36330252_36330493_36331446
transcript_105844.known	chr19	-	1397	3	FSM	ENSG00000232677.10	ENST00000651681.2	1397	3	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_1	310.5	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCGTTTTCTCTAACT	-36315151	True	NA	-3	True	AATAAA	-23	NA	36331745	36324906	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36325765_36330252_36330493_36331446
transcript_105845.nnic	chr19	-	1535	3	NIC	ENSG00000232677.10	novel	1397	3	NA	NA	-4	0	intron_retention	FALSE	canonical	3	45	junction_1	457	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCGTTTTCTCTAACT	NA	False	NA	-3	True	AATAAA	-23	NA	36331760	36324906	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_36325888_36330252_36330493_36331446
transcript_105846.known	chr19	-	2856	3	FSM	ENSG00000232677.10	ENST00000591372.3	2868	3	2	10	-1	6	multi-exon	FALSE	canonical	3	223	junction_1	368	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTCAAAGTGTGGCGT	-36315160	True	NA	-14	True	AATAAA	-12	NA	36331754	36324917	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36327226_36330252_36330493_36331446
transcript_105847.known	chr19	-	2797	3	FSM	ENSG00000232677.10	ENST00000666458.1	2797	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	447.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCATGTGTCTCAAAGTG	-36315162	False	NA	-20	True	AATAAA	-6	NA	36331756	36324923	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36327171_36330252_36330493_36331446
transcript_105848.known	chr19	-	2047	2	FSM	ENSG00000232677.10	ENST00000661195.1	2047	2	0	0	0	0	multi-exon	FALSE	canonical	3	959	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATCTATGTTCAAATCTT	-36315100	True	NA	64	True	NA	NA	NA	36331694	36328693	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36330493_36331446
transcript_105851.known	chr19	-	7491	5	FSM	ENSG00000142065.14	ENST00000270001.12	7491	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	6.86931583201704	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTATTTTTTAATTT	-36377440	True	NA	1	True	AATAAA	-20	NA	36379201	36334452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36341591_36360434_36360534_36362111_36362239_36367883_36367972_36379162
transcript_105861.known	chr19	-	5941	5	FSM	ENSG00000181007.9	ENST00000392161.4	5941	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	13.9104277432436	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAATAGCTACATAATGAG	-36416635	True	NA	NA	False	AAAAAG	-1	NA	36418644	36388629	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36394111_36405579_36405673_36407886_36408014_36409780_36409868_36418491
transcript_105863.known	chr19	-	5207	5	FSM	ENSG00000186017.16	ENST00000452939.7	5250	5	43	0	1	0	multi-exon	FALSE	canonical	3	17	junction_4	9.54921462739214	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGACTCATTTATTTTC	-36488352	True	NA	2	True	AATAAA	-19	NA	36489518	36445118	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36450002_36472910_36473007_36473331_36473459_36476548_36476617_36489485
transcript_105865.known	chr19	-	5327	3	FSM	ENSG00000186017.16	ENST00000493391.6	5327	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	7	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGACTCATTTATTTTC	-36489588	True	NA	2	True	AATAAA	-19	NA	36489861	36445118	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36450002_36476548_36476617_36489485
transcript_105867.known	chr19	-	5285	3	FSM	ENSG00000254004.7	ENST00000523638.6	5285	3	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_2	11	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCAGTTGTTTTTATTT	-36525365	True	NA	-1	True	AATAAA	-22	NA	36528271	36510686	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36515700_36525154_36525374_36528218
transcript_10587.known	chr1	+	949	3	FSM	ENSG00000162616.9	ENST00000487931.1	949	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	72.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAAGGCACTGAAAATATA	77975755	True	NA	NA	False	AATGAA	-22	NA	77979174	78016274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_77979294_78013050_78013620_78016013
transcript_105870.known	chr19	-	330	2	FSM	ENSG00000254004.7	ENST00000520608.2	330	2	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGGGGTTTTTTTGTTTG	-36525359	True	NA	NA	False	GATAAA	-45	NA	36528265	36525090	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36525374_36528218
transcript_105872.known	chr19	+	8336	5	FSM	ENSG00000161298.19	ENST00000292928.7	8336	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	8.76070773396762	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCAGCAGTACCTCCTGA	36604496	True	NA	4	True	AATAAA	-24	NA	36605312	36634114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36605348_36607551_36607623_36609901_36610054_36610649_36610743_36626129
transcript_105873.known	chr19	+	2742	5	FSM	ENSG00000161298.19	ENST00000439428.5	2742	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	10.256095748383	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTAATAAACGTGACATTG	36604518	True	NA	NA	False	AATATA	-42	NA	36605334	36628567	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36605348_36607551_36607623_36609926_36610054_36610649_36610743_36626129
transcript_105874.nic	chr19	+	2877	5	NIC	ENSG00000161298.19	novel	8336	5	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	7.53325958665968	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTCTTGGTGTACATA	36604496	True	NA	8	True	AATAAA	-18	NA	36605312	36628272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_36605731_36607551_36607623_36609901_36610054_36610649_36610743_36626129
transcript_105875.nic	chr19	+	2852	5	NIC	ENSG00000161298.19	novel	8336	5	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	2	12	junction_2	9.41740410091868	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTCTTGGTGTACATA	36604496	True	NA	8	True	AATAAA	-18	NA	36605312	36628272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_36605731_36607551_36607623_36609926_36610054_36610649_36610743_36626129
transcript_105879.known	chr19	+	1004	3	FSM	ENSG00000233527.10	ENST00000448373.6	1004	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	9.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGGACATTAATTCAGTA	36572511	True	NA	3	True	AATAAA	-18	NA	36573376	36577915	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36573526_36574820_36574901_36577140
transcript_105880.known	chr19	-	3955	6	FSM	ENSG00000197808.13	ENST00000588268.6	3955	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	2.36643191323985	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCTCTTCTCATTCCTT	-36666135	True	NA	0	True	NA	NA	NA	36666837	36636617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36640044_36643793_36643863_36656447_36656544_36658298_36658426_36664697_36664787_36666689
transcript_105885.known	chr19	+	2802	6	FSM	ENSG00000189042.14	ENST00000682579.1	2802	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	19.3969069699269	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATGTGTGTGTTTGCGT	36686185	True	NA	25	True	AATAAA	-27	NA	36687611	36721336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36687635_36689396_36689498_36694801_36694877_36712385_36712513_36712780_36712868_36718947
transcript_105887.known	chr19	+	2825	6	FSM	ENSG00000189042.14	ENST00000536254.6	2825	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	32.7694980126336	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTTTATATCATGTGTG	36686201	True	NA	16	True	AATAAA	-18	NA	36687627	36721327	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36687687_36689400_36689498_36694801_36694877_36712385_36712513_36712780_36712868_36718947
transcript_105891.known	chr19	+	2691	4	FSM	ENSG00000189042.14	ENST00000360729.8	2691	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	26.7374061735406	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTTTATATCATGTGT	36688614	False	NA	15	True	AATAAA	-17	NA	36689399	36721326	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36689498_36712385_36712513_36712780_36712868_36718947
transcript_105892.known	chr19	+	1850	2	FSM	ENSG00000267260.3	ENST00000590750.1	1850	2	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCGGGCATTTCCTGTG	36772116	True	NA	11	True	AATAAA	-24	NA	36773152	36777078	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36773310_36775385
transcript_105894.known	chr19	+	2062	2	FSM	ENSG00000267260.3	ENST00000663625.1	2062	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTCTCAGAAAAAATTAAATA	36772088	True	NA	-34	True	NA	NA	NA	36773124	36777033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36773539_36775385
transcript_105895.known	chr19	+	646	2	FSM	ENSG00000267260.3	ENST00000687335.1	1273	2	65	562	37	-557	multi-exon	FALSE	canonical	3	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCGTAGACGGCCTCCG	36772153	True	NA	NA	False	NA	NA	NA	36773189	36775711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36773510_36775385
transcript_1059.known	chr1	-	1284	5	FSM	ENSG00000160075.12	ENST00000291386.4	1284	5	0	0	0	0	multi-exon	FALSE	canonical	3	1714	junction_2	77.3769183930195	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCCTGGTCCTGAATTC	-1548992	True	NA	-5	True	AATAAA	-16	NA	1574863	1541672	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1542168_1543868_1543988_1544862_1545003_1564772_1564917_1574477
transcript_105903.nnic	chr19	-	2811	7	NNC	ENSG00000185869.15	novel	4977	6	NA	NA	-18	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.1775897605147	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGTTGTTGGTCATCTTT	-36915429	True	NA	-3	True	TATAAA	-17	NA	36916039	36888126	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_36888807_36890847_36892472_36907928_36908025_36908332_36908460_36914964_36915023_36915129_36915252_36915935
transcript_105905.nnic	chr19	-	2372	7	NNC	ENSG00000185869.15	novel	4977	6	NA	NA	-18	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.1775897605147	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGTTGTTGGTCATCTTT	-36915429	True	NA	-3	True	TATAAA	-17	NA	36916039	36888126	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_36888819_36891298_36892472_36907928_36908025_36908332_36908460_36914964_36915023_36915129_36915252_36915935
transcript_105908.known	chr19	-	4977	6	FSM	ENSG00000185869.15	ENST00000520965.5	4977	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	8.11418511004032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTTGGTCATCTTTACT	-36915411	True	NA	0	True	TATAAA	-20	NA	36916021	36888123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36892472_36907928_36908025_36908332_36908460_36914964_36915023_36915129_36915252_36915795
transcript_10591.known	chr1	+	2903	3	FSM	ENSG00000162616.9	ENST00000370763.6	2903	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	67	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTGTGCAAGTTTTTG	78004755	True	NA	5	True	TATAAA	-16	NA	78004938	78017964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_78005322_78013050_78013620_78016013
transcript_105912.known	chr19	-	922	5	FSM	ENSG00000197863.9	ENST00000528994.5	922	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	6.59545297913646	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGGTTCAGATCATAC	-36850231	False	NA	-85	True	AATACA	-43	NA	36850313	36819806	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36820115_36823284_36823381_36823666_36823791_36825610_36825693_36850001
transcript_105913.known	chr19	-	2451	5	FSM	ENSG00000197863.9	ENST00000615484.4	2451	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	10.8857705285386	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGAGCACACATCCAGCA	-36838009	False	NA	NA	False	NA	NA	NA	36838027	36818321	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36820115_36823284_36823381_36823666_36823791_36825610_36825693_36837671
transcript_105914.known	chr19	-	3040	5	FSM	ENSG00000197863.9	ENST00000356725.9	3040	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	7.56224173112709	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTGAATATTAATTTCAC	-36838086	True	NA	NA	False	AGTAAA	-15	NA	36838387	36817427	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36820115_36823284_36823381_36823666_36823791_36825610_36825693_36838336
transcript_105916.known	chr19	-	581	5	FSM	ENSG00000197863.9	ENST00000586323.5	581	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	9.73075022801428	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATACGCACCTGTGAAAA	-36850705	True	NA	90	True	NA	NA	NA	36850787	36819923	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_36820115_36823284_36823381_36823666_36823791_36825610_36825693_36850699
transcript_105923.known	chr19	+	3024	4	FSM	ENSG00000267254.7	ENST00000657461.1	3024	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	10.1980390271856	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTTATCTCTATCTATT	36795845	True	NA	16	True	CATAAA	-20	NA	36797501	36830267	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36797812_36801202_36801241_36801875_36801934_36827649
transcript_105924.known	chr19	+	2970	3	FSM	ENSG00000267254.7	ENST00000589556.2	2970	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TATAATACCCAAAAAAAAAA	36795859	True	NA	NA	False	NA	NA	NA	36797515	36804511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36797812_36801202_36801241_36801875
transcript_105925.known	chr19	+	881	3	FSM	ENSG00000267254.7	ENST00000663523.1	881	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	11.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCACGCCTGTAATCCCA	36795877	True	NA	110	True	AATAAA	-24	NA	36797533	36828194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36797812_36801875_36801934_36827649
transcript_105926.known	chr19	+	2959	3	FSM	ENSG00000251247.12	ENST00000420450.6	2959	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	9	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGATGGCCCCTTTTCAG	36850062	True	NA	12	True	ATTAAA	-24	NA	36850875	36879575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36850969_36851829_36851905_36876784
transcript_105927.known	chr19	+	4096	7	FSM	ENSG00000198453.14	ENST00000333987.12	4096	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	5.14511634681104	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATATGAATGTTTACTTGT	36915885	True	NA	17	True	AATAAA	-27	NA	36916331	36952734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36916592_36917578_36917649_36922585_36922847_36925199_36925259_36936745_36936873_36937146_36937243_36949511
transcript_105930.known	chr19	+	1725	5	FSM	ENSG00000198453.14	ENST00000433993.5	1725	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	2.73861278752583	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATCTCTGATTCACATC	36972763	True	NA	NA	False	NA	NA	NA	36973214	36997235	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36973754_36974419_36974467_36991175_36991300_36991750_36991847_36996316
transcript_105931.known	chr19	+	1902	3	FSM	ENSG00000198453.14	ENST00000586353.5	1902	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTGCCTTTAATGTTT	36972761	True	NA	NA	False	AGTAAA	-30	NA	36973212	36980317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_36973754_36974419_36974467_36979003
transcript_105934.known	chr19	+	3639	5	FSM	ENSG00000197050.11	ENST00000337995.4	3639	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	6.01560470775798	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTACCTGGAAGTGGGA	37077256	True	NA	65	True	AATAAA	-20	NA	37078432	37130368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_37078571_37080344_37080389_37089038_37089128_37090994_37091122_37127127
transcript_105937.known	chr19	+	1945	6	FSM	ENSG00000197050.11	ENST00000304239.11	1945	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	29.5932424718887	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTGATGCTATTGTAG	37077258	True	NA	7	True	AATAAA	-13	NA	37078434	37130310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_37078571_37080344_37080389_37089038_37089128_37090994_37091122_37127127_37128403_37130036
transcript_105938.known	chr19	-	6822	6	FSM	ENSG00000196967.11	ENST00000356958.8	6822	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	135.539514533585	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGAGTTAGTCAACATTT	-37171226	False	NA	NA	False	AATAAA	-20	NA	37172741	37147437	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_37153607_37155864_37155958_37156228_37156356_37165594_37165697_37169838_37170055_37172626
transcript_10594.known	chr1	+	5736	21	FSM	ENSG00000117114.21	ENST00000674419.1	5736	21	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	113.596038663327	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGTAAATAAATGTGAATT	81799916	True	NA	-20	True	NA	NA	NA	81800375	81992393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_81800513_81836884_81837058_81907016_81907231_81936727_81936838_81942968_81943770_81950188_81950483_81951017_81951122_81951956_81952143_81952986_81953026_81955876_81956061_81966057_81966184_81966403_81966610_81968025_81968200_81969177_81969388_81970313_81970535_81971851_81971919_81979868_81979961_81981807_81981977_81984582_81984712_81985258_81985356_81990390
transcript_105940.known	chr19	-	8572	5	FSM	ENSG00000196967.11	ENST00000292841.10	8572	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	103.453794033858	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGGTGTGTTCTATTAT	-37171180	True	NA	NA	False	AATAAA	-16	NA	37172695	37145539	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_37153607_37155864_37155958_37156228_37156356_37169838_37170055_37172626
transcript_105942.known	chr19	-	596	3	FSM	ENSG00000196967.11	ENST00000588354.1	596	3	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_2	33.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGAATTTCTTTTTTTTT	-37171179	True	NA	71	True	AATAAA	-17	NA	37172694	37165384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_37165697_37169838_37170055_37172626
transcript_105946.known	chr19	+	6732	6	FSM	ENSG00000188283.12	ENST00000684119.1	6732	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	8.90842298052804	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGCAGTATCACTGTT	37217565	True	NA	3	True	AATAAA	-18	NA	37218213	37248740	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_37218275_37224817_37224940_37230408_37230463_37235548_37235676_37235978_37236075_37242468
transcript_105947.known	chr19	-	2732	6	FSM	ENSG00000245680.11	ENST00000527838.5	2732	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	12.8530152104477	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTTCTGTGAGTTGTTT	-37210079	True	NA	-4	True	AATATA	-14	NA	37210484	37184821	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_37186929_37187098_37187245_37189660_37189754_37190023_37190151_37207039_37207255_37210440
transcript_105951.known	chr19	-	570	3	FSM	ENSG00000267605.8	ENST00000653146.2	575	3	5	0	5	0	multi-exon	FALSE	canonical	1	1	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTTTGGTGCCCCTTT	-37304157	True	NA	NA	False	ATTAAA	-21	NA	37304362	37265938	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_37266086_37266813_37266984_37304109
transcript_105952.known	chr19	-	2303	1	FSM	ENSG00000267605.8	ENST00000612804.1	2303	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAATGTTTTTTTGGTG	NA	False	NA	NA	False	ATTAAA	-14	NA	37268248	37265945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_37265900_37268200
transcript_105960.nic	chr19	+	3154	8	NIC	ENSG00000181666.19	novel	3464	11	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_5	52.1810036589671	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTTCAATTGTCAGTGTA	37313742	True	NA	20	True	AATAAA	-21	NA	37317878	37364446	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37324795_37324937_37347189_37347317_37347776_37347873_37362108
transcript_105965.nic	chr19	+	3092	8	NIC	ENSG00000181666.19	novel	3464	11	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_7	60.1128191021529	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCCTTCAATTGTCAGTG	37313742	True	NA	18	True	AATAAA	-19	NA	37317878	37364444	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37347189_37347317_37347776_37347873_37357961_37358040_37362105
transcript_105967.nic	chr19	+	3013	7	NIC	ENSG00000181666.19	novel	3464	11	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_4	35.4906090865363	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTTCAATTGTCAGTGTA	37313742	True	NA	20	True	AATAAA	-21	NA	37317878	37364446	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37347189_37347317_37347776_37347873_37362108
transcript_105973.known	chr19	+	2854	6	FSM	ENSG00000181666.19	ENST00000544914.5	2854	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	49.4691823259694	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTTCAATTGTCAGTGTA	37313774	True	NA	20	True	AATAAA	-21	NA	37317910	37364446	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37347776_37347873_37362108
transcript_105974.nic	chr19	+	2954	6	NIC	ENSG00000181666.19	novel	3464	11	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	48.9914278216098	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTTCAATTGTCAGTGTA	37313753	True	NA	20	True	AATAAA	-21	NA	37317889	37364446	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_37318187_37323532_37323571_37324207_37324266_37347189_37347317_37347776_37347873_37362108
transcript_105979.known	chr19	+	664	5	FSM	ENSG00000181666.19	ENST00000591485.5	664	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	49.3425526295509	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACAGGCCTGAGCCACT	37313782	True	NA	NA	False	NA	NA	NA	37317918	37325047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37324795
transcript_105980.known	chr19	+	958	5	FSM	ENSG00000181666.19	ENST00000589218.5	958	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	60.8995073871702	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTGAGTTCATGCCAC	37313763	True	NA	NA	False	AAGAAA	-20	NA	37317899	37329105	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37328578
transcript_105982.known	chr19	+	2772	5	FSM	ENSG00000181666.19	ENST00000392153.8	2785	5	17	-4	-5	4	multi-exon	FALSE	canonical	3	44	junction_2	41.0327613011847	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATTGTCAGTGTATCCTC	37333609	True	NA	25	True	AATAAA	-26	NA	37334665	37364451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_37334783_37335168_37335258_37347189_37347317_37347776_37347873_37362108
transcript_105984.known	chr19	+	2152	5	FSM	ENSG00000181666.19	ENST00000589392.5	2152	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	53.2212363629407	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCAGCCATTGCTAGATA	37333614	True	NA	NA	False	NA	NA	NA	37334670	37363864	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_37334783_37335199_37335258_37347189_37347317_37347776_37347873_37362105
transcript_105985.known	chr19	+	573	4	FSM	ENSG00000181666.19	ENST00000592768.5	573	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	56.8584988272544	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAAAGCAGAATGGATTCA	37333567	True	NA	NA	False	NA	NA	NA	37334623	37362299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_37334783_37347189_37347317_37347776_37347873_37362108
transcript_105987.known	chr19	+	5186	5	FSM	ENSG00000189164.15	ENST00000436120.7	5186	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	1.29903810567666	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGTGCCAGGCTTTGT	37370593	True	NA	NA	False	TTTAAA	-19	NA	37371098	37393066	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_37371227_37374157_37374232_37379119_37379247_37380276_37380373_37388305
transcript_105989.known	chr19	+	815	5	FSM	ENSG00000189164.15	ENST00000588512.5	815	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	6.86931583201704	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGAAAGTCATGATTTTT	37370671	True	NA	NA	False	AGTAAA	-30	NA	37371176	37388783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_37371227_37374157_37374232_37379119_37379237_37380276_37380373_37388305
transcript_105990.known	chr19	+	1142	5	FSM	ENSG00000189164.15	ENST00000483919.5	1142	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	7.88986691902975	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATCTGATGTAAATTAAC	37370653	True	NA	NA	False	AATAAA	-25	NA	37371158	37385644	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_37371227_37374157_37374232_37379119_37379247_37380276_37380373_37384867
transcript_105991.known	chr19	-	4066	6	FSM	ENSG00000196437.12	ENST00000316950.11	4066	6	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_5	5.85149553533112	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGACAGTGGTGACAAATC	-37466900	True	NA	-18	True	AATAAA	-15	NA	37467444	37411156	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_37414420_37425867_37425964_37426251_37426379_37444906_37444965_37465312_37465474_37467083
transcript_1060.known	chr1	-	4176	2	FSM	ENSG00000160075.12	ENST00000359060.5	4176	2	0	0	0	0	multi-exon	FALSE	canonical	3	1740	junction_1	0	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTAATTTATTATTATTA	-1548713	False	25871	3	True	AATAAA	-31	NA	1574584	1560847	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1564917_1574477
transcript_106001.known	chr19	-	4003	5	FSM	ENSG00000198182.13	ENST00000395835.7	4003	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	21.2294017814916	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATATCATTACTTGTGT	-37718074	False	NA	NA	False	AATAAA	-18	NA	37719188	37696372	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_37699896_37707913_37708010_37709695_37709823_37711609_37711693_37719014
transcript_106002.known	chr19	-	4327	5	FSM	ENSG00000198182.13	ENST00000355202.9	4327	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	25.1731503789256	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATCATTACTTGTGTTA	-37718647	True	NA	NA	False	AATAAA	-20	NA	37719761	37696370	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_37699896_37707913_37708013_37709695_37709823_37711609_37711693_37719268
transcript_106004.known	chr19	-	403	4	FSM	ENSG00000196381.11	ENST00000585624.1	403	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1.69967317119759	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAAGTTCCAGTTTCTTG	-37692125	False	108	NA	False	AATAAA	-28	NA	37692233	37678622	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_37678774_37686450_37686523_37691520_37691619_37692151
transcript_106008.known	chr19	-	448	3	FSM	ENSG00000266916.8	ENST00000585397.1	448	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	7.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTGTGAGTTTAAAGCCA	-37505988	False	NA	NA	False	NA	NA	NA	37506267	37497362	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_37497593_37505845_37506041_37506244
transcript_106010.known	chr19	-	913	3	FSM	ENSG00000266916.8	ENST00000589025.6	913	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCAAGGTTCTTTCTT	NA	False	NA	NA	False	AATAAA	-40	NA	37507122	37497158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_37497593_37505845_37506041_37506838
transcript_106012.known	chr19	+	6580	5	FSM	ENSG00000267640.7	ENST00000443870.3	6580	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	6.40312423743285	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATGCTGTTCTGAGTAG	37816723	True	NA	7	True	AATAAA	-19	NA	37817410	37832160	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_37817702_37819496_37819618_37820223_37820307_37823810_37823907_37826171
transcript_106014.nic	chr19	+	3103	9	ISM	ENSG00000105738.11	ENST00000222345.11	8004	22	0	88781	0	95	5prime_fragment	FALSE	canonical	3	45	junction_1	5.84700778176325	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGGGCTGGCGCTGAGCA	37904227	True	NA	22	True	NA	NA	NA	37907207	38119588	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_37907359_38029088_38029157_38081255_38083100_38088720_38088852_38099961_38100151_38101051_38101227_38106536_38106641_38110226_38110385_38119305
transcript_106015.nic	chr19	+	3824	9	ISM	ENSG00000105738.11	ENST00000222345.11	8004	22	13	88047	13	829	5prime_fragment	FALSE	canonical	3	45	junction_1	5.84700778176325	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGGAAGCATGGTGGTAC	37904240	True	NA	NA	False	AAAAAG	-10	NA	37907220	38120322	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_37907359_38029088_38029157_38081255_38083100_38088720_38088852_38099961_38100151_38101051_38101227_38106536_38106641_38110226_38110385_38119305
transcript_106023.known	chr19	+	8004	22	FSM	ENSG00000105738.11	ENST00000222345.11	8004	22	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_12	9.5724946101434	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTGTGTTCACTTTT	37904227	True	NA	9	True	AATAAA	-14	NA	37907207	38208369	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_37907359_38029088_38029157_38081255_38083100_38088720_38088852_38099961_38100151_38101051_38101227_38106536_38106641_38110226_38110385_38119305_38119883_38130497_38130773_38141183_38141436_38142572_38142711_38152839_38152968_38162252_38162372_38164478_38164907_38182518_38182741_38192144_38192311_38193536_38193781_38198388_38198533_38201861_38201998_38204126_38204209_38206096
transcript_106026.known	chr19	-	2301	12	FSM	ENSG00000011332.22	ENST00000355526.10	2301	12	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_11	9.15342143501227	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTCGTTCTCCCGTCTG	-38223689	False	533	-10	True	ATTAAA	-26	NA	38224222	38211005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38212134_38212279_38212362_38213643_38213757_38216139_38216260_38216352_38216404_38217459_38217592_38217797_38217877_38218572_38218663_38218930_38219059_38222356_38222465_38222547_38222709_38224113
transcript_106028.known	chr19	-	1562	12	FSM	ENSG00000011332.22	ENST00000456296.5	1562	12	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_11	7.44011907840368	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACAGAGCCTTTTTCTAA	-38229144	True	NA	NA	False	NA	NA	NA	38229677	38211754	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38212134_38212279_38212362_38213643_38213757_38216139_38216260_38216352_38216404_38217459_38217592_38217797_38217877_38218572_38218663_38218930_38219059_38222356_38222465_38222547_38222709_38229558
transcript_10603.known	chr1	+	5479	20	FSM	ENSG00000117114.21	ENST00000319517.10	5479	20	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	80.6629387965183	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAAATAAAACAT	81799937	False	NA	-18	True	NA	NA	NA	81800396	81992196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_81800513_81836884_81837058_81907016_81907231_81936727_81936838_81942968_81943770_81950188_81950483_81951017_81951122_81951956_81952143_81955876_81956061_81966057_81966184_81966403_81966610_81968025_81968200_81969177_81969388_81970313_81970535_81971851_81971919_81979868_81979961_81981807_81981977_81984582_81984712_81985258_81985356_81990390
transcript_106030.known	chr19	-	2356	12	FSM	ENSG00000011332.22	ENST00000614244.4	2356	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	11.6484312425847	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACTGCCTCGTTCTCCCGT	-38223717	False	NA	-13	True	ATTAAA	-23	NA	38224250	38211008	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38212134_38212279_38212392_38213643_38213757_38216139_38216260_38216352_38216404_38217459_38217592_38217797_38217877_38218572_38218663_38218930_38219059_38222356_38222465_38222547_38222709_38224113
transcript_106032.known	chr19	-	2341	12	FSM	ENSG00000011332.22	ENST00000686058.1	2341	12	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	10.5148458605476	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTATTAAACTGGGCCT	-38229181	True	NA	-47	True	NA	NA	NA	38229714	38211042	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38212134_38212279_38212392_38213643_38213757_38216139_38216260_38216352_38216404_38217459_38217592_38217797_38217877_38218572_38218663_38218930_38219059_38222356_38222465_38222547_38222709_38229558
transcript_106040.known	chr19	-	2227	11	FSM	ENSG00000011332.22	ENST00000420980.8	2199	11	-28	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	16.0449368961053	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTCGTTCTCCCGTCTG	-38223717	False	NA	-10	True	ATTAAA	-26	NA	38224250	38211005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38212134_38212279_38212392_38213643_38213757_38216139_38216260_38216352_38216404_38217797_38217877_38218572_38218663_38218930_38219059_38222356_38222465_38222547_38222709_38224113
transcript_106052.known	chr19	-	1257	9	FSM	ENSG00000167645.17	ENST00000337679.12	1257	9	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	467.674499518629	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGACAGCCTCTCCTTGGC	-38315904	False	2916	-12	True	AATAAA	-17	NA	38315923	38305113	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38305508_38306913_38306991_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315868
transcript_106059.known	chr19	-	964	8	FSM	ENSG00000167645.17	ENST00000329420.12	964	8	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_7	317.512204489843	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCGCCCGCTGAACCTCCC	-38315774	False	NA	NA	False	NA	NA	NA	38315793	38305351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38305508_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315716
transcript_106060.nic	chr19	-	1311	8	NIC	ENSG00000167645.17	novel	2769	8	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	125	junction_7	340.337587505976	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGACAGCCTCTCCTTGG	-38315890	False	NA	-13	True	AATAAA	-16	NA	38315909	38305114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_38305508_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315722
transcript_106061.known	chr19	-	940	8	FSM	ENSG00000167645.17	ENST00000591784.5	940	8	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_7	352.109850669895	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCGCCCGCTGAACCTCCC	-38315780	False	NA	NA	False	NA	NA	NA	38315799	38305351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38305508_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315746
transcript_106062.known	chr19	-	1181	8	FSM	ENSG00000167645.17	ENST00000592694.5	1181	8	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_7	215.510594464705	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTGGCCTCGCGCACG	-38315895	False	NA	-2	True	AATAAA	-27	NA	38315914	38305103	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38305508_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315868
transcript_106067.known	chr19	-	1077	8	FSM	ENSG00000167645.17	ENST00000591755.5	1077	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	400.474310623525	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAATAAAAAAT	-38315901	False	NA	NA	False	NA	NA	NA	38315920	38306696	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38306991_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315868
transcript_10607.nic	chr1	+	5781	20	NIC	ENSG00000117114.21	novel	5733	21	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	3	132	junction_1	59.7672771993397	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAACATGTGAACTTTTA	81800417	False	NA	9	True	AATAAA	-18	NA	81800876	81992422	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_81801069_81836884_81837058_81907016_81907231_81936727_81936838_81942968_81943770_81950188_81950483_81951017_81951122_81951956_81952143_81955876_81956061_81966057_81966184_81966403_81966610_81968025_81968200_81969177_81969388_81970313_81970535_81971851_81971919_81979868_81979961_81981807_81981977_81984582_81984712_81985258_81985356_81990390
transcript_106071.known	chr19	+	1688	7	FSM	ENSG00000167642.13	ENST00000301244.12	1688	7	0	0	0	0	multi-exon	FALSE	canonical	3	2937	junction_5	127.361253483502	1583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCGTGAACTTTCGCCAA	38255604	True	NA	4	True	AATAAA	-16	NA	38264572	38292615	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38264999_38283626_38283798_38287875_38287936_38289137_38289192_38290118_38290281_38290536_38290576_38291839
transcript_106073.known	chr19	+	1246	7	FSM	ENSG00000167642.13	ENST00000587090.5	1246	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	1180.42526470571	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGCATGTGCTTTCTTT	38255607	True	NA	14	True	AATAAA	-26	NA	38264575	38292451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38264724_38283626_38283798_38287875_38287936_38289137_38289192_38290118_38290281_38290536_38290576_38291839
transcript_106091.known	chr19	+	1367	6	FSM	ENSG00000167642.13	ENST00000454580.7	1367	6	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	1205.61370264277	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGGGAGTCCTAATTTC	38255607	True	NA	31	True	AATAAA	-43	NA	38264575	38292468	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38264999_38287875_38287936_38289137_38289192_38290118_38290281_38290536_38290576_38291839
transcript_106096.known	chr19	+	520	4	FSM	ENSG00000167644.12	ENST00000588605.5	520	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	76.2932937201342	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGACTGGTCAGCGTGGTG	38301538	True	NA	27	True	ATTAAA	-18	NA	38304163	38305006	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38304284_38304374_38304491_38304564_38304687_38304844
transcript_106097.known	chr19	+	374	4	FSM	ENSG00000167644.12	ENST00000301246.10	374	4	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	17.5562587763516	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGACTGGTCAGCGTGGTG	38301625	True	NA	27	True	ATTAAA	-18	NA	38304250	38305006	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38304284_38304374_38304491_38304623_38304687_38304844
transcript_106098.known	chr19	-	560	4	FSM	ENSG00000167641.11	ENST00000301242.9	560	4	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_1	16.391054470859	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTGTGGCTGTTTTTCC	-38256348	False	1037	-1	True	NA	NA	NA	38256374	38251236	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38251447_38252305_38252339_38252893_38252975_38256138
transcript_1061.known	chr1	-	2124	1	FSM	ENSG00000228594.4	ENST00000422725.4	2124	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGCTGTCTGTGTGTTAT	-1599369	True	NA	-3	True	NA	NA	NA	1600135	1598011	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1598000_1600100
transcript_106102.known	chr19	+	5721	3	FSM	ENSG00000099337.5	ENST00000263372.5	5721	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	3	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTACTATGCTTTTTC	38318629	True	NA	18	True	AATAAA	-24	NA	38319844	38332076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38320273_38326592_38326989_38327179
transcript_106109.known	chr19	+	771	6	FSM	ENSG00000099341.12	ENST00000592561.5	771	6	0	0	0	0	multi-exon	FALSE	canonical	3	1782	junction_3	102.071347595689	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGACCAAGGGGTGAAGT	38351542	True	NA	NA	False	NA	NA	NA	38374771	38382254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38374962_38376159_38376233_38376351_38376455_38379239_38379406_38380898_38381000_38382116
transcript_106110.known	chr19	-	2245	4	FSM	ENSG00000179168.15	ENST00000334928.11	2245	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.05480466765633	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGTGAAGCTGGACCAGAGC	-38387970	False	NA	79	True	ATTAAA	-18	NA	38388034	38384266	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38384530_38385420_38387281_38387760_38387823_38387974
transcript_106114.known	chr19	+	1539	5	FSM	ENSG00000188766.13	ENST00000587013.6	4885	5	0	3346	0	1478	multi-exon	FALSE	canonical	0	0	junction_1	6.44204936336256	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCGGAACTTGGAGCTTGA	38388402	False	NA	NA	False	NA	NA	NA	38388420	38396241	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38388808_38391945_38392115_38392211_38392289_38394642_38394787_38395479
transcript_106119.known	chr19	-	2634	18	FSM	ENSG00000171777.16	ENST00000589358.5	2634	18	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_15	3.17647058823529	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATGGTTCTTGGTATTG	NA	False	NA	-7	True	ATTAAA	-14	NA	38426305	38409057	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38409371_38409954_38410097_38410885_38410999_38411114_38411250_38411344_38411382_38412671_38412817_38412930_38413050_38413192_38413298_38413393_38413475_38414847_38415124_38417051_38417169_38418390_38418565_38419859_38420014_38420130_38420263_38420907_38420970_38421093_38421201_38421968_38422154_38426068
transcript_106120.known	chr19	-	2293	17	FSM	ENSG00000171777.16	ENST00000587738.2	2293	17	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_14	2.97647022494766	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTCCCTGCACTTAGT	-38426023	True	NA	NA	False	NA	NA	NA	38426162	38409839	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38410097_38410885_38410999_38411114_38411250_38411344_38411382_38412671_38412817_38412930_38413050_38413192_38413298_38413393_38413475_38414847_38415124_38417051_38417169_38418390_38418565_38419859_38420014_38420130_38420263_38420907_38420970_38421093_38421201_38421968_38422154_38426068
transcript_106121.known	chr19	-	2749	17	FSM	ENSG00000171777.16	ENST00000588404.5	2749	17	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_11	3.43636344847282	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATGGTTCTTGGTATTG	NA	False	NA	-7	True	ATTAAA	-14	NA	38426305	38409057	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38409371_38409954_38410097_38410885_38410999_38411114_38411250_38411344_38411382_38412671_38412817_38412930_38413050_38413192_38413298_38413393_38413475_38414847_38415124_38417051_38417167_38418390_38418565_38419859_38420263_38420907_38420970_38421093_38421201_38421968_38422154_38426068
transcript_106122.known	chr19	-	3313	16	FSM	ENSG00000171777.16	ENST00000592322.5	3313	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_13	3.06956384885902	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATGGTTCTTGGTATTG	NA	False	NA	-7	True	ATTAAA	-14	NA	38426305	38409057	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38410097_38410885_38410999_38411114_38411382_38412671_38412817_38412930_38413050_38413192_38413298_38413393_38413475_38414847_38415124_38417051_38417169_38418390_38418565_38419859_38420014_38420130_38420263_38420907_38420970_38421093_38421201_38421968_38422154_38426068
transcript_106123.known	chr19	+	1271	8	FSM	ENSG00000130244.13	ENST00000252530.10	1313	8	42	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	14.0043724950314	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTAGGACCTCTCTCTGT	38402416	True	NA	8	True	AATAAA	-15	NA	38403134	38409084	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38403219_38403337_38403487_38403559_38403695_38404907_38405114_38405343_38405422_38405518_38405636_38406909_38407078_38408750
transcript_106127.known	chr19	+	2530	7	FSM	ENSG00000130244.13	ENST00000588348.5	2530	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	15.0738920727934	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGACCTCTCTCTGTGGGG	38402435	True	NA	12	True	AATAAA	-19	NA	38403153	38409088	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38403219_38403337_38403487_38403559_38403695_38404907_38405114_38405343_38405422_38405518_38407078_38408750
transcript_106134.known	chr19	+	826	5	FSM	ENSG00000130244.13	ENST00000588262.5	826	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	26.4386081328046	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCAAGAACCATGTTCTCC	38402416	True	NA	-36	True	NA	NA	NA	38403134	38409040	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38403219_38403337_38403487_38403559_38403695_38406909_38407078_38408750
transcript_106137.known	chr19	-	3132	17	FSM	ENSG00000171777.16	ENST00000615439.5	3132	17	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_14	2.97647022494766	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATGGTTCTTGGTATTG	-38426080	True	NA	-7	True	ATTAAA	-14	NA	38426219	38409057	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38410097_38410885_38410999_38411114_38411250_38411344_38411382_38412671_38412817_38412930_38413050_38413192_38413298_38413393_38413475_38414847_38415124_38417051_38417169_38418390_38418565_38419859_38420014_38420130_38420263_38420907_38420971_38421094_38421201_38421968_38422154_38426068
transcript_106141.nnic	chr19	+	1078	10	NNC	ENSG00000196218.14	novel	11455	80	NA	NA	-19	-20812	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_9	6.73300329224139	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCCGGGTGTGGTGGTGT	38431808	True	NA	7	True	AATAAA	-23	NA	38433671	38447074	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_38433875_38440744_38440865_38442348_38442454_38443557_38443633_38443717_38443797_38444148_38444262_38444583_38444678_38446471_38446566_38446693_38446769_38446954
transcript_106142.known	chr19	-	552	2	FSM	ENSG00000268055.2	ENST00000595853.2	571	2	14	5	14	-5	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGATTCTGAGTGAGTCTCT	NA	False	NA	NA	False	AATAAA	-16	NA	38537128	38535516	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38535935_38536994
transcript_106145.known	chr19	-	2631	31	FSM	ENSG00000104814.13	ENST00000396857.7	2631	31	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_30	24.6041776037232	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATCTTGTTTTTCTTGG	-38617859	False	94	-3	True	AATAAA	-19	NA	38617953	38587640	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38587818_38593281_38593338_38595484_38595556_38595639_38595730_38595938_38596002_38596311_38596487_38597033_38597138_38597325_38597385_38597485_38597595_38599924_38599986_38600076_38600154_38601440_38601526_38605408_38605492_38605567_38605731_38606172_38606216_38607863_38607912_38607989_38608034_38608111_38608171_38609595_38609675_38609908_38610026_38611050_38611133_38611242_38611306_38612610_38612743_38613879_38613953_38614042_38614086_38614244_38614293_38614389_38614446_38616194_38616260_38617353_38617445_38617567_38617626_38617796
transcript_106151.nnic	chr19	-	446	5	NNC	ENSG00000104814.13	novel	2631	31	NA	NA	-399	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_4	22.8089894559141	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATCTTGTTTTTCTTGG	-38595504	True	NA	-3	True	AATAAA	-19	NA	38596129	38587640	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_38587818_38593281_38593338_38595484_38595556_38595639_38595730_38596077
transcript_106153.nnic	chr19	-	530	4	NNC	ENSG00000104814.13	novel	2631	31	NA	NA	-399	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_3	26.1661358757205	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATCTTGTTTTTCTTGG	-38595504	True	NA	-3	True	AATAAA	-19	NA	38596129	38587640	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_38587818_38593281_38593338_38595484_38595730_38596077
transcript_106155.known	chr19	+	516	3	FSM	ENSG00000267291.1	ENST00000589557.1	516	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	4	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTTTTCAGTTTGTTT	38596288	True	NA	11	True	AATACA	-17	NA	38596345	38601694	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38596437_38597252_38597396_38601412
transcript_106160.known	chr19	+	772	8	FSM	ENSG00000178982.10	ENST00000248342.9	772	8	0	0	0	0	multi-exon	FALSE	canonical	3	2115	junction_7	263.201947762782	1514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTACTGTCTCCTCCCTGGC	38572448	True	NA	17	True	AATAAA	-17	NA	38619187	38636954	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38619328_38620336_38620436_38624076_38624198_38626027_38626103_38632429_38632497_38632600_38632679_38634992_38635119_38636888
transcript_106162.known	chr19	+	760	8	FSM	ENSG00000178982.10	ENST00000593149.5	760	8	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	932.685589125974	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTACTGTCTCCTCCCTGG	38572355	True	NA	16	True	AATAAA	-16	NA	38619094	38636953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38619224_38620336_38620436_38624076_38624198_38626027_38626103_38632429_38632497_38632600_38632679_38634992_38635119_38636888
transcript_106165.known	chr19	+	670	7	FSM	ENSG00000178982.10	ENST00000592558.1	670	7	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_5	920.778595658165	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTACTGTCTCCTCCCTGG	38572471	True	NA	16	True	AATAAA	-16	NA	38619210	38636953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38619328_38620336_38620436_38624076_38624198_38626027_38626103_38632429_38632497_38634992_38635119_38636888
transcript_106169.known	chr19	+	780	7	FSM	ENSG00000178982.10	ENST00000614624.4	780	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	969.971649070219	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTGTCTCCTCCCTGGCT	38572342	True	NA	18	True	AATAAA	-18	NA	38619081	38636955	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38619328_38624076_38624198_38626027_38626103_38632429_38632497_38632600_38632679_38634992_38635119_38636888
transcript_10619.nnic	chr1	+	870	2	NNC	ENSG00000117114.21	novel	5023	25	NA	NA	444	74422	at_least_one_novel_splicesite	FALSE	canonical	3	130	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTTAAAGGGATCAATAAT	81800101	True	NA	NA	False	AATACA	-8	NA	81801441	81836966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_81802230_81836884
transcript_106192.known	chr19	+	4990	21	FSM	ENSG00000130402.13	ENST00000252699.7	4990	21	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_8	32.8941864164475	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTTTCCTTACAGTCTA	38611851	True	NA	NA	False	AATATA	-17	NA	38647648	38731589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38647908_38700599_38700715_38701001_38701122_38704933_38705021_38706043_38706132_38708116_38708196_38709394_38709477_38710256_38710343_38714468_38714562_38717085_38717317_38717926_38718075_38721537_38721689_38723613_38723723_38723936_38724078_38724156_38724340_38724430_38724566_38725723_38725904_38726956_38727104_38727945_38728027_38728995_38729155_38729273
transcript_106195.nic	chr19	+	3593	21	NIC	ENSG00000130402.13	novel	4990	21	NA	NA	-63	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_18	45.1407520982981	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCACAAAAACAAAAAAACTA	38611788	True	NA	-35	True	AAAAAG	-42	NA	38647585	38730144	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_38647908_38700599_38700715_38701001_38701122_38704933_38705021_38706043_38706132_38708116_38708196_38709394_38709477_38710256_38710343_38714468_38714562_38717085_38717317_38717926_38718075_38721537_38721689_38723613_38723723_38723936_38724078_38724156_38724340_38724430_38724566_38725723_38725904_38726956_38727104_38728315_38728382_38728995_38729155_38729273
transcript_106208.known	chr19	+	2923	21	FSM	ENSG00000130402.13	ENST00000424234.7	2923	21	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_8	28.5367745199068	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGTCCTCCGGGGTGGGT	38611862	True	NA	NA	False	NA	NA	NA	38647659	38729533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38647908_38700599_38700715_38701001_38701122_38704933_38705021_38706043_38706132_38708116_38708196_38709394_38709477_38711275_38711362_38714468_38714562_38717085_38717317_38717926_38718075_38721537_38721689_38723613_38723723_38723936_38724078_38724156_38724340_38724430_38724566_38725723_38725904_38726956_38727104_38727945_38728027_38728995_38729155_38729273
transcript_106210.known	chr19	+	4958	21	FSM	ENSG00000130402.13	ENST00000440400.2	4958	21	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_18	42.4985587990934	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAGTCAGTTTCCTTAC	38611862	True	NA	NA	False	AATATA	-11	NA	38647659	38731583	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38647908_38700599_38700715_38701001_38701122_38704933_38705021_38706043_38706132_38708116_38708196_38709394_38709477_38711275_38711362_38714468_38714562_38717085_38717317_38717926_38718075_38721537_38721689_38723613_38723723_38723936_38724078_38724156_38724340_38724430_38724566_38725723_38725904_38726956_38727104_38728315_38728382_38728995_38729155_38729273
transcript_10631.nic	chr1	-	573	3	ISM	ENSG00000137941.17	ENST00000610996.1	2028	15	-67	38896	-67	-2579	5prime_fragment	FALSE	canonical	3	13	junction_1	0.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGGAACCATTACAGCAA	-83998453	True	NA	NA	False	AAGAAA	-3	NA	83999217	83951891	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_83951977_83952186_83952388_83998930
transcript_10632.known	chr1	-	1601	1	FSM	ENSG00000271576.1	ENST00000605506.1	1601	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTGTGTGCATAATTTG	-84077348	True	NA	NA	False	AATAAA	-19	NA	84077931	84076330	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_84076300_84077900
transcript_10634.known	chr1	+	4513	10	FSM	ENSG00000142875.20	ENST00000370689.6	4513	10	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_8	11.9917667228729	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTGAGTCGTGAATTCT	84076208	True	NA	18	True	ATTAAA	-23	NA	84078061	84238498	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_84078372_84179176_84179239_84182199_84182329_84184036_84184136_84185099_84185183_84196615_84196743_84197728_84197825_84202682_84202806_84214152_84214318_84235179
transcript_106380.known	chr19	-	1046	6	FSM	ENSG00000182472.9	ENST00000594552.5	1046	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	6.55438784326958	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTAATTCTTTCTTTTT	-38735122	False	76	-3	True	AATAAA	-38	NA	38735410	38730186	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38730879_38730964_38731024_38731106_38731224_38733702_38733782_38734812_38734871_38735369
transcript_106383.known	chr19	-	488	5	FSM	ENSG00000182472.9	ENST00000595177.1	488	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	9.12071817347735	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACAAGAACAGCGACAGC	-38735134	False	76	NA	False	NA	NA	NA	38735422	38730677	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38730879_38730964_38731024_38731106_38731224_38734812_38734871_38735369
transcript_106388.known	chr19	-	2552	1	FSM	ENSG00000182472.9	ENST00000601685.1	2552	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGCT	-38735384	False	288	NA	False	NA	NA	NA	38735672	38733120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38733100_38735700
transcript_106389.known	chr19	-	494	4	FSM	ENSG00000205076.5	ENST00000378626.5	494	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	16.2685791225499	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACTGTGTCTGTGTCCCAT	NA	False	NA	NA	False	AATAAA	-17	NA	38773517	38770967	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38771140_38771828_38772031_38773014_38773104_38773486
transcript_106390.known	chr19	+	499	4	FSM	ENSG00000178934.5	ENST00000314980.5	499	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	15.084944665313	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTGTGTCCCATTCA	NA	False	NA	NA	False	AATAAA	-20	NA	38789199	38791754	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38789233_38789615_38789705_38790688_38790891_38791579
transcript_10640.known	chr1	+	1905	9	FSM	ENSG00000142875.20	ENST00000370688.7	1905	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_8	30.4094454898474	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGATCCTTATATTTA	84076290	True	NA	NA	False	ATTAAA	-20	NA	84078143	84205439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_84078372_84179176_84179239_84182199_84182329_84184036_84184136_84185099_84185183_84196615_84196743_84197728_84197825_84202682_84202806_84204481
transcript_10641.known	chr1	+	1567	4	FSM	ENSG00000203943.9	ENST00000370673.7	1567	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	2.49443825784929	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCAGTGTATCTTTGATC	NA	False	NA	17	True	AATAAA	-17	NA	84298365	84350798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_84298568_84303202_84303288_84325636_84325749_84349630
transcript_106410.known	chr19	-	2142	13	FSM	ENSG00000104824.18	ENST00000221419.10	2142	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	437.817908305877	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGCTTTTCTCCCTCTC	-38804812	True	NA	1	True	AATAAA	-43	NA	38849986	38836369	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38836781_38837383_38837480_38837593_38837652_38838396_38838599_38838893_38839016_38840095_38840377_38840487_38840560_38843841_38843915_38844007_38844105_38845649_38845736_38845852_38846091_38847315_38847435_38849699
transcript_106414.known	chr19	-	1633	13	FSM	ENSG00000104824.18	ENST00000600873.5	1633	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	580.438118770832	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTATTCCTTTTTTTTTT	-38850706	True	NA	-28	True	NA	NA	NA	38852338	38836634	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38836781_38837383_38837480_38837593_38837652_38838396_38838599_38838893_38839016_38840095_38840377_38840487_38840560_38843841_38843915_38844007_38844105_38845649_38845736_38845852_38846091_38847315_38847435_38852295
transcript_106427.nic	chr19	-	2243	12	NIC	ENSG00000104824.18	novel	2142	13	NA	NA	-15	0	intron_retention	FALSE	canonical	0	0	junction_8	456.727308917196	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCACTTGCTGGGATTC	-38849987	False	NA	-24	True	AATAAA	-18	NA	38850001	38836394	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_38836781_38837383_38837480_38837593_38837652_38838396_38838599_38838893_38839016_38840095_38840560_38843841_38843915_38844007_38844105_38845649_38845736_38845852_38846091_38847315_38847435_38849699
transcript_10643.known	chr1	+	1948	9	FSM	ENSG00000117133.11	ENST00000370654.6	1948	9	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_7	34.4492380176979	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCTGCCAGTGTATATAAA	84472914	True	NA	22	True	AATAAA	-27	NA	84479265	84498352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_84479510_84480955_84481013_84482914_84482996_84489632_84489729_84490318_84490473_84495372_84495456_84495881_84496064_84496243_84496371_84497428
transcript_106444.known	chr19	-	1200	10	FSM	ENSG00000104823.9	ENST00000221418.9	1200	10	0	0	0	0	multi-exon	FALSE	canonical	3	1732	junction_8	64.5407326642602	1311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTGCCCTTCTTGGATA	-38821993	True	NA	NA	False	AATAAA	-14	NA	38831794	38815421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38815718_38815856_38816008_38816283_38816356_38816452_38816524_38817064_38817130_38817315_38817365_38817450_38817576_38831077_38831167_38831308_38831517_38831720
transcript_10646.known	chr1	-	6571	7	FSM	ENSG00000117151.13	ENST00000370630.6	6571	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	7.86694914747063	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAAGGCTGTCTCAAAAAA	-84573466	True	NA	-21	True	AATAAA	-20	NA	84574440	84549610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_84555200_84563256_84563419_84563734_84563833_84565840_84566013_84569930_84570140_84570581_84570721_84574238
transcript_106462.known	chr19	-	882	8	FSM	ENSG00000104823.9	ENST00000598707.5	882	8	0	0	0	0	multi-exon	FALSE	canonical	3	1732	junction_6	73.0507232220551	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTCTGATTGGGCTGTTT	-38821974	True	NA	NA	False	NA	NA	NA	38831775	38816135	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38816356_38816452_38816524_38817064_38817130_38817315_38817365_38817450_38817576_38831077_38831167_38831308_38831517_38831720
transcript_106467.nic	chr19	-	2985	6	ISM	ENSG00000104824.18	ENST00000221419.10	2142	13	-349	5736	-349	1265	5prime_fragment	FALSE	canonical	0	0	junction_2	621.470514183899	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAACCACAACAAAAAAA	-38850321	False	NA	74	True	NA	NA	NA	38850335	38842105	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_38843915_38844007_38844105_38845649_38845736_38845852_38846091_38847315_38847435_38849699
transcript_10649.known	chr1	-	1633	7	FSM	ENSG00000117151.13	ENST00000370625.1	1633	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	17.0652343148936	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATACACACGAATGTCC	-84573447	True	NA	NA	False	AATAAA	-26	NA	84574421	84554852	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_84555200_84563256_84563419_84563734_84563833_84565840_84566013_84569930_84570140_84570581_84570721_84573915
transcript_106506.known	chr19	-	1948	11	FSM	ENSG00000104824.18	ENST00000647557.1	1948	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	479.005052165423	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGGGATTCCAGGATG	-38847420	False	428	-17	True	AATAAA	-25	NA	38847434	38836387	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38836781_38837383_38837480_38837593_38837652_38838396_38838599_38838893_38839016_38840095_38840560_38843841_38843915_38844007_38844105_38845649_38845736_38845852_38846091_38847315
transcript_106507.known	chr19	-	3094	6	FSM	ENSG00000104824.18	ENST00000597731.1	3094	6	0	0	0	0	multi-exon	FALSE	canonical	3	1402	junction_5	141.275050875942	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACAGCACTTGCTGGGA	-38840696	False	NA	-27	True	AATAAA	-15	NA	38842328	38836397	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38836781_38837383_38837480_38837593_38837652_38838396_38838599_38838893_38839016_38840095
transcript_106510.nnic	chr19	-	1862	13	NNC	ENSG00000187994.14	novel	3058	12	NA	NA	-14	0	intron_retention	FALSE	non_canonical	0	0	junction_4	13.9154191057578	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAACAAAA	-38878149	True	NA	NA	False	AAAACA	-19	NA	38878289	38868981	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_38869167_38869246_38869411_38869572_38869705_38869942_38870085_38870142_38870261_38870569_38870993_38871077_38871228_38871646_38871712_38871797_38871871_38873885_38873989_38876330_38876491_38876692_38876782_38878231
transcript_106515.known	chr19	-	3058	12	FSM	ENSG00000187994.14	ENST00000591812.2	3058	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	14.0200564717505	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTATGTTTGTGTGTGT	-38878135	True	NA	-5	True	ATTAAA	-22	NA	38878275	38867829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38869167_38869246_38869411_38869572_38869705_38869942_38870261_38870569_38870993_38871077_38871228_38871646_38871712_38871797_38871871_38873885_38873989_38876330_38876491_38876692_38876782_38878231
transcript_106519.known	chr19	-	1846	11	FSM	ENSG00000187994.14	ENST00000598904.5	1846	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	14.4	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAACAAAA	-38876641	False	NA	NA	False	AAAACA	-19	NA	38876781	38868981	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38869167_38869246_38869411_38869572_38869705_38869942_38870261_38870569_38870993_38871077_38871228_38871646_38871712_38871797_38871871_38873885_38873989_38876330_38876475_38876692
transcript_106520.known	chr19	-	1810	3	FSM	ENSG00000187994.14	ENST00000593424.5	1810	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTTTGTATGTTTGTGT	-38869242	True	NA	-9	True	ATTAAA	-18	NA	38870043	38867833	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38869411_38869572_38869705_38869942
transcript_106521.known	chr19	-	1862	16	FSM	ENSG00000068903.21	ENST00000249396.12	1862	16	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_14	18.9215926038657	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGTCTGGCCTCCTGTTT	-38898924	True	NA	-5	True	ATTAAA	-19	NA	38899618	38878559	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38879311_38879433_38879501_38879631_38879703_38880684_38880737_38880820_38880898_38881099_38881156_38881431_38881492_38883626_38883757_38889086_38889156_38889688_38889746_38889854_38889962_38890102_38890145_38893413_38893528_38893818_38893868_38898378_38898426_38899505
transcript_106524.known	chr19	-	2062	15	FSM	ENSG00000068903.21	ENST00000392081.6	2062	15	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_12	6.9045976991969	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGGCCTCCTGTTTCTT	NA	False	NA	-2	True	ATTAAA	-22	NA	38899862	38878556	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38879311_38879433_38879501_38879631_38879703_38880684_38880737_38880820_38880898_38881099_38881156_38881431_38881492_38883626_38883757_38889086_38889156_38889688_38889746_38889854_38889962_38890102_38890145_38893413_38893528_38893818_38893868_38899505
transcript_106527.known	chr19	+	1192	6	FSM	ENSG00000104825.17	ENST00000313582.6	1192	6	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_5	52.9626283335712	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAGACCAGACTGATCTT	38894890	True	NA	16	True	AATAAA	-21	NA	38899968	38908889	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38900212_38905014_38905121_38905201_38905536_38907220_38907310_38907398_38907660_38908730
transcript_106528.known	chr19	+	1929	5	FSM	ENSG00000104825.17	ENST00000572515.5	1929	5	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_1	28.9525473836069	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	38894873	True	NA	NA	False	NA	NA	NA	38899951	38908538	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38900212_38905014_38905121_38905201_38905536_38907220_38907310_38907398
transcript_106530.known	chr19	-	1085	5	FSM	ENSG00000262484.2	ENST00000571838.2	1085	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	0.433012701892219	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGCCTCCGTGAGCAGCA	-38912149	False	NA	-3	True	AATAAA	-16	NA	38912186	38908979	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38909326_38910562_38911084_38911565_38911654_38911811_38911853_38912097
transcript_106536.nic	chr19	-	1825	17	NIC	ENSG00000104835.15	novel	1924	16	NA	NA	-25	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_6	121.779369532569	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTCTGTGGATCTGTGAA	-38924905	True	NA	-9	True	AATAAA	-14	NA	38930788	38915265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_38915491_38915614_38915750_38915840_38915907_38916036_38916130_38916220_38916315_38917723_38917834_38917920_38918009_38918093_38918140_38918421_38918531_38918765_38918814_38919761_38919868_38920085_38920150_38921391_38921447_38921526_38921668_38922237_38922268_38926204_38926301_38930469
transcript_106537.known	chr19	-	1630	17	FSM	ENSG00000104835.15	ENST00000600042.5	1630	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	147.301548171599	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTCAGGAGACCCCGGAC	-38924878	True	NA	NA	False	NA	NA	NA	38930761	38915563	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38915750_38915840_38915907_38916036_38916130_38916220_38916315_38917723_38917834_38917920_38918009_38918093_38918140_38918421_38918531_38918765_38918814_38919761_38919868_38920085_38920150_38921391_38921447_38921526_38921597_38922001_38922079_38922237_38922268_38926204_38926301_38930469
transcript_106544.known	chr19	-	1886	16	FSM	ENSG00000104835.15	ENST00000430193.7	1886	16	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	92.9758869576169	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCAAAAAGTCCCCAATAAA	-38924875	True	NA	-42	True	NA	NA	NA	38930758	38915298	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38915750_38915840_38915907_38916036_38916130_38916220_38916315_38917723_38917828_38917914_38918009_38918093_38918140_38918421_38918531_38918765_38918814_38919761_38919868_38920085_38920150_38921391_38921447_38921526_38921668_38922237_38922268_38926204_38926301_38930469
transcript_106551.nic	chr19	-	2519	15	NIC	ENSG00000104835.15	novel	1924	16	NA	NA	-25	0	intron_retention	FALSE	canonical	0	0	junction_5	100.240959692134	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTCTGTGGATCTGTGAA	-38924905	True	NA	-9	True	AATAAA	-14	NA	38930788	38915265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_38915750_38915840_38915907_38916036_38916130_38916220_38916315_38917723_38917834_38917920_38918009_38918093_38918140_38918421_38918531_38918765_38918814_38919761_38919868_38920085_38920150_38921391_38921447_38921526_38922268_38926204_38926301_38930469
transcript_106557.nic	chr19	-	2079	15	NIC	ENSG00000104835.15	novel	1924	16	NA	NA	-25	0	intron_retention	FALSE	canonical	0	0	junction_4	99.8148285576847	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTCTGTGGATCTGTGAA	-38924905	True	NA	-9	True	AATAAA	-14	NA	38930788	38915265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_38915750_38915840_38916130_38916220_38916315_38917723_38917834_38917920_38918009_38918093_38918140_38918421_38918531_38918765_38918814_38919761_38919868_38920085_38920150_38921391_38921447_38921526_38921668_38922237_38922268_38926204_38926301_38930469
transcript_106558.nic	chr19	-	2040	15	NIC	ENSG00000104835.15	novel	1924	16	NA	NA	-25	0	intron_retention	FALSE	canonical	0	0	junction_4	100.07048536315	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTCTGTGGATCTGTGAA	-38924905	True	NA	-9	True	AATAAA	-14	NA	38930788	38915265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_38915907_38916036_38916130_38916220_38916315_38917723_38917834_38917920_38918009_38918093_38918140_38918421_38918531_38918765_38918814_38919761_38919868_38920085_38920150_38921391_38921447_38921526_38921668_38922237_38922268_38926204_38926301_38930469
transcript_10656.known	chr1	-	2892	6	FSM	ENSG00000117151.13	ENST00000477677.5	2892	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	10.1862652625975	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGATTGTAGAGATGTAT	NA	False	NA	2	True	AATAAA	-23	NA	84574480	84553120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_84555200_84563256_84563419_84563734_84563833_84565840_84566013_84570581_84570721_84574238
transcript_10659.known	chr1	-	1748	6	FSM	ENSG00000117151.13	ENST00000465118.6	1748	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	18.7978722200147	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGTAGTGTCTCCCCTTT	-84573456	True	NA	-1	True	AATAAA	-19	NA	84574430	84554537	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_84555200_84563256_84563419_84563734_84563833_84565840_84566013_84570581_84570721_84573915
transcript_106606.known	chr19	-	2315	6	FSM	ENSG00000161243.9	ENST00000292853.9	2315	6	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_5	12.4354332453679	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTTCAGATCTTTTTAAT	-39032263	True	NA	-4	True	AATAAA	-19	NA	39032549	39024020	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_39025555_39026869_39027006_39031028_39031125_39031208_39031321_39031863_39032254_39032502
transcript_106611.known	chr19	+	959	3	FSM	ENSG00000128626.12	ENST00000308018.9	959	3	0	0	0	0	multi-exon	FALSE	canonical	3	483	junction_1	204.5	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGAGGGCTCTTTTTTTTTT	38917310	True	NA	37	True	ATTAAA	-28	NA	38930943	38933168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38930999_38931275_38931344_38932332
transcript_106612.known	chr19	+	929	3	FSM	ENSG00000128626.12	ENST00000402029.3	929	3	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_1	294.5	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTTGTGGAGTATTTGC	38917365	True	NA	26	True	AATAAA	-26	NA	38930998	38933020	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38931172_38931275_38931344_38932332
transcript_106613.known	chr19	-	1022	3	FSM	ENSG00000104835.15	ENST00000598598.5	1022	3	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_1	1.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGGAGATCCGGAAGGAGC	-38924880	True	NA	NA	False	NA	NA	NA	38930763	38921635	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38922268_38926204_38926301_38930469
transcript_106615.known	chr19	+	1220	2	FSM	ENSG00000128626.12	ENST00000407800.2	1220	2	0	0	0	0	multi-exon	FALSE	canonical	3	892	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGCACGGAGGGCTCTTTT	38917320	True	NA	31	True	ATTAAA	-22	NA	38930953	38933162	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_38931344_38932332
transcript_106616.known	chr19	-	2218	6	FSM	ENSG00000269190.6	ENST00000292852.9	2218	6	0	0	0	0	multi-exon	TRUE	canonical	3	55	junction_5	6.64529909033446	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTGTGTATGTGTCTT	-38975083	True	NA	-2	True	NA	NA	NA	38975742	38941400	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_38942752_38944968_38945105_38946471_38946568_38948566_38948679_38949970_38950337_38975585
transcript_106624.known	chr19	+	3025	11	FSM	ENSG00000130669.17	ENST00000593690.5	3025	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	150.143964247651	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCTGTGTGCGATGTG	39116130	True	NA	4	True	ATTAAA	-14	NA	39125813	39179401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39125920_39168229_39168313_39168624_39168841_39169531_39169758_39172917_39173377_39173575_39174011_39174930_39175065_39175311_39175439_39176589_39176716_39177674_39177810_39178423
transcript_10663.known	chr1	+	724	3	FSM	ENSG00000117133.11	ENST00000370656.5	724	3	0	0	0	0	multi-exon	FALSE	canonical	3	359	junction_1	26	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCGGCTCACTGCACCCT	84472907	True	NA	NA	False	NA	NA	NA	84479258	84483330	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_84479510_84480955_84481013_84482914
transcript_106634.nic	chr19	+	2899	10	NIC	ENSG00000130669.17	novel	3025	11	NA	NA	-55	0	combination_of_known_junctions	TRUE	canonical	3	159	junction_2	75.9338568576887	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGTGTGCGATGTGT	NA	False	NA	5	True	ATTAAA	-15	NA	39125714	39179402	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_39125920_39168229_39168303_39169531_39169758_39172917_39173377_39173575_39174011_39174930_39175065_39175311_39175439_39176589_39176716_39177674_39177810_39178423
transcript_106639.known	chr19	+	2555	10	FSM	ENSG00000130669.17	ENST00000321944.8	2555	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	137.50797956644	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCTGTGTGCGATGTG	39116114	True	NA	4	True	ATTAAA	-14	NA	39125797	39179401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39125920_39168229_39168313_39169531_39169758_39172917_39173107_39173575_39174011_39174930_39175065_39175311_39175439_39176589_39176716_39177674_39177810_39178423
transcript_10664.known	chr1	-	806	4	FSM	ENSG00000174021.12	ENST00000370645.9	806	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	1645.19347055462	983	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGCATTATTATTGGT	-84506531	False	NA	-11	True	AATAAA	-18	NA	84506581	84498324	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_84498549_84501825_84501971_84506010_84506302_84506435
transcript_106641.nic	chr19	+	2909	10	NIC	ENSG00000130669.17	novel	3025	11	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	3	126	junction_2	85.1931719283293	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGTGTGCGATGTGT	NA	False	NA	5	True	ATTAAA	-15	NA	39125714	39179402	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_39125920_39168229_39168313_39169531_39169758_39172917_39173377_39173575_39174011_39174930_39175065_39175311_39175439_39176589_39176716_39177674_39177810_39178423
transcript_106651.known	chr19	+	2739	9	FSM	ENSG00000130669.17	ENST00000358301.7	2739	9	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	89.0216792416319	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGTGTGCGATGTGT	39116118	True	NA	5	True	ATTAAA	-15	NA	39125801	39179402	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39125920_39169531_39169758_39172917_39173377_39173575_39174011_39174930_39175065_39175311_39175439_39176589_39176716_39177674_39177810_39178423
transcript_106658.known	chr19	+	5735	9	FSM	ENSG00000130669.17	ENST00000599386.5	5735	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	136.371677319743	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGACAAAA	39116150	True	NA	NA	False	NA	NA	NA	39125833	39182816	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39125920_39168229_39168303_39169531_39169758_39173575_39174011_39174930_39175065_39175311_39175439_39176589_39176716_39177674_39177810_39178423
transcript_106669.known	chr19	+	1715	8	FSM	ENSG00000130669.17	ENST00000599470.5	1715	8	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	151.447977193221	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGGCCCTCCCCCATGTT	39116098	True	NA	NA	False	NA	NA	NA	39125781	39178817	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39125920_39169531_39169758_39173575_39174011_39174930_39175065_39175311_39175439_39176589_39176716_39177674_39177810_39178423
transcript_10667.known	chr1	-	5752	14	FSM	ENSG00000117155.17	ENST00000342203.8	5752	14	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_13	26.6815540297747	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTACTGGAATGAATG	-84688352	True	NA	NA	False	AATACA	-17	NA	84690461	84643705	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_84647608_84650361_84650528_84651882_84651998_84655831_84656006_84656347_84656485_84658317_84658469_84662197_84662376_84662454_84662531_84664416_84664553_84666121_84666233_84669680_84669894_84670645_84670816_84671176_84671309_84690370
transcript_106675.known	chr19	+	1975	6	FSM	ENSG00000188505.5	ENST00000339852.5	1975	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	3.03315017762062	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGATCTGATCACTTGC	39196643	True	NA	10	True	ATTAAA	-20	NA	39196963	39201884	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39197320_39198052_39198116_39198201_39198254_39199169_39199266_39200345_39200485_39200615
transcript_106676.known	chr19	-	3579	5	FSM	ENSG00000128011.5	ENST00000248668.5	3579	5	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_4	4.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTTAGTGAATACTTACTT	-39320559	True	NA	-16	True	AATAAA	-18	NA	39320863	39306565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_39308543_39313930_39315374_39316081_39316137_39318325_39318359_39320792
transcript_106683.known	chr19	-	173	1	FSM	ENSG00000269246.1	ENST00000599274.1	173	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTTGTGATCTGTGCG	-39341873	True	NA	-1	True	AATAAA	-19	NA	39341945	39341772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_39341800_39341900
transcript_106692.nnic	chr19	+	4027	15	NNC	ENSG00000179134.16	novel	4519	16	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	250.964638943418	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAACCACCACCCTCC	39338328	True	NA	112	True	AAAACA	-23	NA	39342395	39384926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_39342577_39354005_39354067_39355054_39355151_39356688_39357090_39369654_39370126_39375649_39375890_39376436_39376547_39376704_39376792_39377484_39377825_39378503_39378590_39379965_39380085_39380586_39380786_39380989_39381114_39383207_39383292_39383498
transcript_106697.nnic	chr19	+	4010	15	NIC	ENSG00000179134.16	novel	4519	16	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	67	junction_1	240.696491499997	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAACCACCACCCTCC	39338351	True	NA	112	True	AAAACA	-23	NA	39342418	39384926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_39342577_39348287_39348390_39354005_39354067_39356688_39357090_39369654_39370126_39375649_39375890_39376436_39376547_39376704_39376792_39377484_39377825_39378503_39378590_39379965_39380085_39380586_39380786_39380989_39381114_39383207_39383292_39383498
transcript_106704.nic	chr19	+	3931	14	FSM	ENSG00000179134.16	ENST00000610417.5	4680	14	-25	774	-25	0	multi-exon	FALSE	canonical	3	438	junction_2	121.933438045556	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAACCACCACCCTCC	39338328	True	NA	112	True	AAAACA	-23	NA	39342395	39384926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39342577_39354005_39354067_39356688_39357090_39369654_39370126_39375649_39375890_39376436_39376547_39376704_39376792_39377484_39377825_39378503_39378590_39379965_39380085_39380586_39380786_39380989_39381114_39383207_39383292_39383498
transcript_106705.nic	chr19	+	3722	14	NIC	ENSG00000179134.16	novel	4519	16	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_13	206.525669278678	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAACCACCACCCTCC	39338328	True	NA	112	True	AAAACA	-23	NA	39342395	39384926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_39342577_39354005_39354067_39356688_39357090_39369654_39370126_39375649_39375890_39376436_39376547_39376704_39376792_39377484_39377825_39378503_39378590_39379965_39380085_39380586_39380786_39380989_39381114_39383207_39383292_39383707
transcript_106715.known	chr19	-	2200	14	FSM	ENSG00000006712.15	ENST00000221265.8	2200	14	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_10	15.4693818605634	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCTTCTCCAACAGCGA	-39388227	True	NA	NA	False	ATTAAA	-20	NA	39391106	39385628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_39386404_39386481_39386573_39386693_39386800_39388338_39388468_39388559_39388677_39388761_39388866_39388946_39389016_39389092_39389199_39389281_39389384_39389479_39389547_39389639_39389762_39390068_39390162_39390259_39390290_39390817
transcript_106716.nic	chr19	+	4138	13	ISM	ENSG00000179134.16	ENST00000610417.5	4680	14	-25	774	-25	0	intron_retention	FALSE	canonical	3	438	junction_2	115.496993707869	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAACCACCACCCTCC	39338328	True	NA	112	True	AAAACA	-23	NA	39342395	39384926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_39342577_39354005_39354067_39356688_39357090_39369654_39370126_39375649_39375890_39376436_39376547_39376704_39376792_39377484_39377825_39378503_39378590_39379965_39380085_39380586_39380786_39380989_39381114_39383207
transcript_106721.nic	chr19	+	3859	13	NIC	ENSG00000179134.16	novel	4519	16	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	224	junction_1	157.831375383843	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAACCACCACCCTCC	39338339	True	NA	112	True	AAAACA	-23	NA	39342406	39384926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_39342577_39356688_39357090_39369654_39370126_39375649_39375890_39376436_39376547_39376704_39376792_39377484_39377825_39378503_39378590_39379965_39380085_39380586_39380786_39380989_39381114_39383207_39383292_39383498
transcript_106722.known	chr19	+	2877	13	FSM	ENSG00000179134.16	ENST00000598913.5	2877	13	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_12	234.190494042777	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTGATCATTTCCTCT	39338374	True	NA	12	True	NA	NA	NA	39342441	39384188	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39342577_39356688_39357090_39369654_39370126_39375649_39375890_39376436_39376547_39376704_39376792_39377484_39377825_39378503_39378590_39379965_39380085_39380586_39380786_39380989_39381114_39383207_39383292_39383707
transcript_106728.nic	chr19	+	4066	12	ISM	ENSG00000179134.16	ENST00000598913.5	2877	13	-35	-738	-14	0	intron_retention	FALSE	canonical	3	224	junction_1	155.429663080408	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAACCACCACCCTCC	39338339	True	NA	112	True	AAAACA	-23	NA	39342406	39384926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_39342577_39356688_39357090_39369654_39370126_39375649_39375890_39376436_39376547_39376704_39376792_39377484_39377825_39378503_39378590_39379965_39380085_39380586_39380786_39380989_39381114_39383207
transcript_106736.known	chr19	+	2690	1	FSM	ENSG00000179134.16	ENST00000601613.1	2690	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	39345732	False	NA	NA	False	TTTAAA	-29	NA	39349799	39352489	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39349800_39352500
transcript_106737.known	chr19	+	3590	4	FSM	ENSG00000063322.15	ENST00000315588.11	3590	4	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_2	24.5356882927706	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTATTCTTGTTTATAT	39385224	True	NA	93	True	ATTAAA	-15	NA	39391377	39400641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39391639_39392463_39392523_39393552_39393638_39397456
transcript_106741.known	chr19	+	2941	3	FSM	ENSG00000063322.15	ENST00000599417.2	2941	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	226	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCCAAGGCCTGTATTT	39391202	False	NA	-77	True	NA	NA	NA	39391302	39399976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39391639_39393552_39393638_39397456
transcript_106743.known	chr19	+	636	4	FSM	ENSG00000063322.15	ENST00000596297.1	636	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	228.170988515192	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGGGGACAGGGAGTGG	39385258	True	NA	-73	True	NA	NA	NA	39391411	39397698	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39391639_39392463_39392523_39393552_39393661_39397456
transcript_106744.known	chr19	+	1747	2	FSM	ENSG00000128016.7	ENST00000597629.3	1747	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGATCCTGGCTTCTTC	39404036	True	NA	4	True	AATAAA	-15	NA	39406846	39409407	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39406929_39407742
transcript_106747.known	chr19	+	8048	19	FSM	ENSG00000090924.15	ENST00000425673.6	8048	19	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	17.223387057382	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTGTTTATTGACTGGC	39409920	True	NA	20	True	AATAAA	-24	NA	39412668	39428415	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39413413_39414064_39414196_39414991_39415261_39415338_39415440_39416347_39416415_39416550_39416598_39416849_39417001_39417554_39417693_39417904_39418106_39418733_39418827_39418916_39419004_39420625_39420660_39420750_39420853_39420948_39420997_39421074_39421114_39421282_39421300_39422114_39422289_39422731_39423654_39423732
transcript_10675.known	chr1	-	1933	13	FSM	ENSG00000117155.17	ENST00000605755.5	1933	13	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_12	47.3675785743793	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGGGTGTGTCATAAAG	-84688335	True	NA	-43	True	NA	NA	NA	84690444	84647375	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_84647608_84650361_84650528_84651882_84651998_84655831_84656006_84656347_84656485_84658317_84658469_84662197_84662376_84662454_84662531_84664416_84664553_84666121_84666233_84669680_84669894_84670645_84670816_84690370
transcript_106764.known	chr19	-	631	5	FSM	ENSG00000105193.9	ENST00000251453.8	631	5	0	0	0	0	multi-exon	TRUE	canonical	3	8683	junction_4	207.89104718578	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGTCTGGATTTTGACC	-39297445	True	NA	-17	True	AGTAAA	-15	NA	39435949	39433136	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_39433419_39433521_39433570_39433664_39433762_39435606_39435709_39435847
transcript_106765.known	chr19	-	407	4	FSM	ENSG00000105193.9	ENST00000599705.1	407	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4280.40893685015	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAACTCACTTGTATAATA	-39435538	False	NA	-67	True	NA	NA	NA	39435705	39433259	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_39433419_39433517_39433570_39433664_39433762_39435606
transcript_106766.known	chr19	-	492	5	FSM	ENSG00000105193.9	ENST00000601655.5	492	5	0	0	0	0	multi-exon	FALSE	canonical	3	493	junction_3	3601.52124108688	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCAAGAACTGTGTGTGG	-39297437	True	NA	-24	True	AATAAA	-22	NA	39435941	39433216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_39433419_39433521_39433570_39433664_39433762_39435657_39435709_39435847
transcript_106767.known	chr19	-	643	4	FSM	ENSG00000105193.9	ENST00000339471.8	643	4	0	0	0	0	multi-exon	FALSE	canonical	3	8683	junction_3	239.708619415786	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTGGCCTTATGTGT	-39297432	True	NA	-14	True	AATAAA	-32	NA	39435936	39433206	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_39433419_39433521_39433762_39435606_39435709_39435847
transcript_106768.known	chr19	-	555	5	FSM	ENSG00000105193.9	ENST00000599539.5	555	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	3874.72547414652	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTGGCCTTATGTGT	-39297411	True	NA	-14	True	AATAAA	-32	NA	39435915	39433206	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_39433419_39433493_39433570_39433664_39433762_39435606_39435709_39435847
transcript_106769.known	chr19	-	2389	4	FSM	ENSG00000105193.9	ENST00000601390.1	2389	4	0	0	0	0	multi-exon	FALSE	canonical	3	8683	junction_3	91.7327034862098	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAGTTTCAAGAACTGT	-39297444	True	NA	-30	True	AATAAA	-16	NA	39435948	39433222	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_39433419_39433521_39433570_39433664_39435709_39435847
transcript_106775.known	chr19	+	3678	30	FSM	ENSG00000196235.14	ENST00000432763.7	3678	30	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_1	87.9080700235623	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGTGTGTGTGTGTGTGT	39430149	True	NA	31	True	AATAAA	-22	NA	39445581	39476670	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39445638_39445803_39445966_39453355_39453522_39457674_39457741_39458293_39458306_39458817_39458888_39459004_39459074_39459183_39459250_39459558_39459590_39459891_39459961_39464797_39465050_39466479_39466570_39466674_39466746_39468755_39468862_39469078_39469173_39469261_39469399_39470118_39470275_39470376_39470524_39471356_39471504_39471604_39471731_39472408_39472494_39472809_39472930_39473011_39473115_39473202_39473331_39473415_39473522_39473962_39474122_39474233_39474403_39474514_39474719_39476080_39476177_39476255
transcript_106782.nic	chr19	+	3706	30	NIC	ENSG00000196235.14	novel	3678	30	NA	NA	-70	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	130.164187910909	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGTGTGTGTGTGTGTGT	39445451	True	NA	31	True	AATAAA	-22	NA	39445475	39476670	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_39445638_39445881_39445966_39453355_39453522_39457674_39457741_39458293_39458306_39458817_39458888_39459004_39459074_39459183_39459250_39459558_39459590_39459891_39459961_39464797_39465050_39466479_39466570_39466674_39466746_39468755_39468862_39469078_39469173_39469261_39469399_39470118_39470275_39470376_39470524_39471356_39471504_39471604_39471731_39472408_39472494_39472809_39472930_39473011_39473115_39473202_39473331_39473415_39473522_39473962_39474122_39474233_39474403_39474514_39474719_39476080_39476177_39476255
transcript_106791.known	chr19	+	3698	29	FSM	ENSG00000196235.14	ENST00000402194.6	3698	29	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_4	133.815871629639	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTGCGTGTGTGTGTGT	39445521	False	NA	27	True	AATAAA	-18	NA	39445545	39476666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39445638_39445803_39445966_39453355_39453522_39457674_39457741_39458817_39458888_39459004_39459074_39459183_39459250_39459558_39459590_39459891_39459961_39464797_39465050_39466479_39466570_39466674_39466746_39468755_39468862_39469078_39469173_39469261_39469399_39470118_39470275_39470376_39470524_39471356_39471504_39471604_39471731_39472408_39472494_39472809_39472930_39473011_39473115_39473202_39473331_39473415_39473522_39473962_39474122_39474233_39474403_39474514_39474719_39476080_39476177_39476255
transcript_10681.nic	chr1	-	1110	6	ISM	ENSG00000117155.17	ENST00000481102.5	2457	15	-200	17081	-36	1699	5prime_fragment	FALSE	canonical	3	40	junction_5	59.1452449483473	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGTAAACAGCTGGCAAAG	-84690494	False	NA	NA	False	AAGAAA	-11	NA	84690504	84664419	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_84664553_84666121_84666233_84669680_84669894_84670645_84670816_84671176_84671309_84690153
transcript_106832.known	chr19	+	3902	31	FSM	ENSG00000196235.14	ENST00000599117.5	3902	31	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	139.864239731089	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGTGTGTGTGTGTGTGT	39441493	False	NA	31	True	AATAAA	-22	NA	39441642	39476670	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39441726_39445440_39445638_39445803_39445966_39453355_39453522_39457674_39457741_39458293_39458306_39458817_39458888_39459004_39459074_39459183_39459250_39459558_39459590_39459891_39459961_39464797_39465050_39466479_39466570_39466674_39466746_39468755_39468862_39469078_39469173_39469261_39469399_39470118_39470275_39470376_39470524_39471356_39471504_39471604_39471731_39472408_39472494_39472809_39472930_39473011_39473115_39473202_39473331_39473415_39473522_39473962_39474122_39474233_39474403_39474514_39474719_39476080_39476177_39476255
transcript_106845.known	chr19	+	3742	29	FSM	ENSG00000196235.14	ENST00000598725.5	3742	29	0	0	0	0	multi-exon	FALSE	canonical	3	529	junction_13	78.2396566809378	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGTGTGTGTGTGTGTGT	39430251	True	NA	31	True	AATAAA	-22	NA	39445683	39476670	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39445966_39453355_39453522_39457674_39457741_39458293_39458306_39458817_39458888_39459004_39459074_39459183_39459250_39459558_39459590_39459891_39459961_39464797_39465050_39466479_39466570_39466674_39466746_39468755_39468862_39469078_39469173_39469261_39469399_39470118_39470275_39470376_39470524_39471356_39471504_39471604_39471731_39472408_39472494_39472809_39472930_39473011_39473115_39473202_39473331_39473415_39473522_39473962_39474122_39474233_39474403_39474514_39474719_39476080_39476177_39476255
transcript_106846.known	chr19	+	3770	28	FSM	ENSG00000196235.14	ENST00000359191.10	3770	28	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	129.861274509701	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGTGTGTGTGTGTGTGT	39430211	True	NA	31	True	AATAAA	-22	NA	39445643	39476670	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39445966_39453355_39453522_39457674_39457741_39458817_39458888_39459004_39459074_39459183_39459250_39459558_39459590_39459891_39459961_39464797_39465050_39466479_39466570_39466674_39466746_39468755_39468862_39469078_39469173_39469261_39469399_39470118_39470275_39470376_39470524_39471356_39471504_39471604_39471731_39472408_39472494_39472809_39472930_39473011_39473115_39473202_39473331_39473415_39473522_39473962_39474122_39474233_39474403_39474514_39474719_39476080_39476177_39476255
transcript_106861.known	chr19	+	5037	11	FSM	ENSG00000105197.11	ENST00000607714.6	5037	11	0	0	0	0	multi-exon	FALSE	canonical	3	1229	junction_6	78.5788775689752	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	39459779	True	NA	16	True	AATAAA	-16	NA	39480837	39493779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39480962_39481882_39482034_39482884_39482917_39483134_39483157_39485543_39485603_39485687_39485808_39486186_39486292_39486396_39486496_39488060_39488218_39488538_39488646_39489718
transcript_106867.known	chr19	+	1481	10	FSM	ENSG00000105197.11	ENST00000601358.5	1481	10	0	0	0	0	multi-exon	FALSE	canonical	1	23	junction_4	423.230550368746	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCCCGAGAGTCTCCA	39480473	False	NA	15	True	AATAAA	-24	NA	39480483	39489928	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39480962_39481882_39482034_39482884_39482917_39483134_39483157_39485687_39485808_39486186_39486292_39486396_39486496_39488060_39488218_39488538_39488646_39489718
transcript_106878.known	chr19	+	786	4	FSM	ENSG00000105197.11	ENST00000599794.5	786	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	640.640825007794	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACATCTCCCTCTGACCA	39459782	True	NA	-13	True	NA	NA	NA	39480840	39490119	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39480962_39488060_39488218_39488538_39488646_39489718
transcript_106881.known	chr19	+	2004	9	FSM	ENSG00000090932.11	ENST00000356433.10	2004	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_6	25.5828922328966	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTGACTAACGAGGCTGA	39497941	True	NA	8	True	TATAAA	-18	NA	39498946	39508469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39499044_39499191_39499474_39500614_39500673_39502814_39503058_39504070_39504289_39505228_39505452_39507038_39507619_39507829_39507915_39508251
transcript_106882.known	chr19	+	2332	8	FSM	ENSG00000090932.11	ENST00000205143.4	2332	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_6	25.0126498608449	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTGAATGCTTTGTATT	39497962	True	NA	20	True	TATAAA	-30	NA	39498967	39508481	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39499044_39499191_39499474_39500614_39500673_39502814_39503058_39504070_39504289_39505228_39505452_39507038_39507619_39507829
transcript_106883.nic	chr19	+	1908	7	ISM	ENSG00000090932.11	ENST00000356433.10	2004	9	-31	675	21	505	5prime_fragment	FALSE	canonical	3	29	junction_6	14.0830867828517	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTGAGTTTTTCTTCTT	39497910	True	NA	5	True	TTTAAA	-1	NA	39498915	39507794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_39499044_39499191_39499474_39500614_39500673_39502814_39503058_39504070_39504289_39505228_39505452_39507038
transcript_106884.known	chr19	+	1375	6	FSM	ENSG00000090932.11	ENST00000600437.1	1375	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	4.69041575982343	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCTATTCTAGGCACTGA	39497889	True	NA	NA	False	NA	NA	NA	39498894	39505653	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39499044_39499191_39499474_39500614_39500673_39502814_39503058_39504070_39504289_39505228
transcript_106889.known	chr19	+	1704	6	FSM	ENSG00000186838.14	ENST00000335426.8	1704	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	4.77493455452533	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCTGTGGTCCCAGCTAT	39514591	False	NA	17	True	AATAAA	-24	NA	39515112	39520686	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39516022_39518607_39518633_39518739_39518794_39518902_39518978_39519070_39519171_39520145
transcript_10689.nnic	chr1	-	3386	4	NNC	ENSG00000171517.6	novel	3345	2	NA	NA	-18	17227	intron_retention	FALSE	canonical	0	0	junction_1	48.5546656414763	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGCAGATTTCACCCAG	-84888748	True	NA	NA	False	AAAAAG	-16	NA	84893224	84794374	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_84796514_84797317_84797602_84865384_84866139_84893015
transcript_106890.known	chr19	+	481	4	FSM	ENSG00000186838.14	ENST00000600586.1	481	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	10.077477638554	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGTGTCCAGTCTGACT	39515788	False	NA	4	True	AATACA	-14	NA	39515813	39520264	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39516022_39518739_39518794_39519070_39519171_39520145
transcript_106892.nnic	chr19	+	1219	3	NIC	ENSG00000186838.14	novel	481	4	NA	NA	-68	-20	combination_of_known_splicesites	FALSE	canonical	2	9	junction_2	11.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCAGGTGTGGTGGTGT	39515351	False	NA	-3	True	AATAAA	-4	NA	39515377	39520666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_39516022_39518739_39518794_39520145
transcript_106893.known	chr19	+	645	2	FSM	ENSG00000186838.14	ENST00000597876.1	645	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGGGGAGAGGGGGGTG	39514618	True	NA	NA	False	NA	NA	NA	39515445	39518808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39516022_39518739
transcript_106894.known	chr19	-	281	2	FSM	ENSG00000176401.6	ENST00000601837.1	281	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTGTGGTGGCACGCGC	-39529990	False	2853	NA	False	AATAAA	-8	NA	39532843	39531336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_39531514_39532739
transcript_106895.known	chr19	-	1866	1	FSM	ENSG00000176401.6	ENST00000326282.5	1866	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTGCATTTTCCCTTTT	-39529999	False	2853	-5	True	AATAAA	-13	NA	39532852	39530986	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_39531000_39532900
transcript_106896.known	chr19	-	1455	1	FSM	ENSG00000176396.11	ENST00000390658.4	1455	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTCCATTCTTGTTTTCC	-39537308	True	NA	-6	True	TATAAA	-15	NA	39540161	39538706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_39538700_39540200
transcript_106898.known	chr19	-	2448	12	FSM	ENSG00000105204.14	ENST00000348817.7	2448	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	21.0021643906267	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCCTGCCTGAGCGTTT	-39831043	False	3158	-7	True	AGTAAA	-11	NA	39834201	39825352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_39826087_39826179_39826287_39826671_39826868_39826951_39826988_39827284_39827426_39827509_39827657_39828296_39828584_39829879_39830028_39830374_39830564_39830663_39830784_39831804_39831969_39834022
transcript_106899.nic	chr19	-	2614	11	NIC	ENSG00000105204.14	novel	2724	11	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_10	21.4951157242756	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCCTGAGCGTTTGCA	-39830486	False	NA	-4	True	AGTAAA	-14	NA	39833644	39825349	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_39826087_39826179_39826287_39826671_39826868_39827284_39827426_39827509_39827657_39828296_39828584_39829879_39830028_39830374_39830564_39830663_39830784_39831804_39831969_39833266
transcript_106900.known	chr19	-	2007	11	FSM	ENSG00000105204.14	ENST00000430012.6	2007	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	17.9902751507585	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCCCCCTCCCTGGGGC	-39831000	False	3158	NA	False	NA	NA	NA	39834158	39825714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_39826087_39826179_39826287_39826671_39826868_39827284_39827426_39827509_39827657_39828296_39828584_39829879_39830028_39830374_39830564_39830663_39830784_39831804_39831969_39834022
transcript_106901.known	chr19	-	2724	11	FSM	ENSG00000105204.14	ENST00000593685.5	2724	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_10	17.7485210651479	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCCTGAGCGTTTGCA	-39830476	False	685	-4	True	AGTAAA	-14	NA	39833634	39825349	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_39826087_39826179_39826287_39826671_39826988_39827284_39827426_39827509_39827657_39828296_39828584_39829879_39830028_39830374_39830564_39830663_39830784_39831804_39831969_39833266
transcript_106902.known	chr19	-	2496	11	FSM	ENSG00000105204.14	ENST00000323039.10	2496	11	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_10	12.8234160815284	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCCTGAGCGTTTGCA	-39831004	False	3158	-4	True	AGTAAA	-14	NA	39834162	39825349	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_39826087_39826179_39826287_39826671_39826988_39827284_39827426_39827509_39827657_39828296_39828584_39829879_39830028_39830374_39830564_39830663_39830784_39831804_39831969_39834022
transcript_106911.known	chr19	-	1125	9	FSM	ENSG00000105202.9	ENST00000221801.8	1125	9	0	0	0	0	multi-exon	FALSE	canonical	3	1735	junction_7	328.285317978127	938	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATGTCTGCTGCTCATT	-39797634	True	NA	-9	True	ATTAAA	-14	NA	39846379	39834457	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_39834563_39834667_39834814_39836555_39836669_39837710_39837844_39839034_39839206_39840232_39840328_39840413_39840516_39840616_39840788_39846290
transcript_10692.known	chr1	-	3515	3	FSM	ENSG00000171517.6	ENST00000370611.4	3515	3	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTTGTTGAGGTGCAT	-84888730	True	NA	-11	True	AATAAA	-17	NA	84893206	84811601	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_84814172_84865384_84866139_84893015
transcript_106927.known	chr19	+	1754	11	FSM	ENSG00000013275.8	ENST00000157812.7	1754	11	0	0	0	0	multi-exon	TRUE	canonical	3	791	junction_6	110.954945811352	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAATGATGGATATGTTC	39960594	True	NA	NA	False	NA	NA	NA	39971164	39981764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39971239_39972145_39972245_39972368_39972556_39974293_39974441_39974523_39974634_39974734_39974829_39979816_39979985_39980069_39980147_39980285_39980455_39980661_39980718_39981191
transcript_106930.known	chr19	+	1333	11	FSM	ENSG00000013275.8	ENST00000455878.2	1333	11	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	306.971089843979	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATTTCTTCTTAGAAGT	39960599	True	NA	54	True	AATAAA	-19	NA	39971169	39981441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39971239_39972145_39972245_39972461_39972556_39974293_39974441_39974523_39974634_39974734_39974829_39979816_39979985_39980069_39980147_39980285_39980455_39980661_39980718_39981191
transcript_106931.known	chr19	+	1623	10	FSM	ENSG00000013275.8	ENST00000601697.5	1623	10	0	0	0	0	multi-exon	FALSE	canonical	3	791	junction_6	105.945478640877	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATTTCTTCTTAGAAGT	39960609	True	NA	54	True	AATAAA	-19	NA	39971179	39981441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39971239_39972145_39972245_39972368_39972556_39974293_39974441_39974523_39974634_39974734_39974829_39979816_39979985_39980069_39980147_39980285_39980718_39981191
transcript_106932.known	chr19	+	1532	10	FSM	ENSG00000013275.8	ENST00000593455.5	1532	10	0	0	0	0	multi-exon	FALSE	canonical	3	791	junction_6	114.842887846348	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTTCTTCAATAAATAGAT	39960599	True	NA	21	True	NA	NA	NA	39971169	39981408	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_39971239_39972145_39972245_39972368_39972556_39974293_39974441_39974523_39974634_39974734_39974829_39979816_39979985_39980069_39980455_39980661_39980718_39981191
transcript_106937.known	chr19	-	3472	6	FSM	ENSG00000197782.15	ENST00000595687.6	3472	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	35.8586112391431	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATTTGCACGTTTATTT	-40089427	True	NA	75	True	AATATA	-35	NA	40090888	40073179	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40076210_40081818_40081915_40083110_40083238_40084744_40084799_40090165_40090236_40090793
transcript_106938.known	chr19	-	467	6	FSM	ENSG00000197782.15	ENST00000601688.5	467	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	31.1897419033887	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTACAACTCTTGGCATT	-40089477	True	NA	-8	True	AGTAAA	-27	NA	40090938	40076122	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40076210_40081818_40081915_40083110_40083238_40084744_40084799_40090165_40090236_40090905
transcript_106941.known	chr19	-	3600	6	FSM	ENSG00000197782.15	ENST00000455521.5	3600	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	38.6698849235422	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCATTTTCAGATTTCTT	-40089477	True	NA	NA	False	NA	NA	NA	40090938	40072992	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40076210_40081818_40081918_40083110_40083238_40084744_40084799_40090165_40090236_40090905
transcript_106942.known	chr19	-	665	5	FSM	ENSG00000197782.15	ENST00000599368.5	665	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_4	16.4525833837729	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGCATTGAGGCCTTT	-40088996	False	NA	1	True	AGTAAA	-36	NA	40090457	40076113	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40076210_40081818_40081915_40083110_40083238_40084744_40084799_40090165
transcript_106943.known	chr19	-	546	5	FSM	ENSG00000197782.15	ENST00000595773.5	546	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	42.5499706227866	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTATTTGCAATACACATAA	-40089477	True	NA	NA	False	NA	NA	NA	40090938	40075973	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40076210_40081818_40081915_40083110_40083238_40084744_40084799_40090905
transcript_106945.known	chr19	-	446	5	FSM	ENSG00000197782.15	ENST00000601715.5	446	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	36.7287353444139	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGCATTGAGGCCTTT	-40088774	False	NA	1	True	AGTAAA	-36	NA	40090235	40076113	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40076210_40081818_40081918_40083110_40083238_40084744_40084799_40090165
transcript_106947.known	chr19	-	1145	6	FSM	ENSG00000105219.10	ENST00000599263.6	1145	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	4.40908153700972	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCTCTCTGCCCTCATTGG	-40226605	True	NA	-23	True	AATAAA	-20	NA	40226697	40222207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40222473_40223151_40223304_40223387_40223547_40224487_40224644_40224721_40224812_40226374
transcript_106948.known	chr19	-	1816	5	FSM	ENSG00000105219.10	ENST00000430325.7	1816	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	4.84767985741633	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCTCTCTGCCCTCATTGG	-40226597	True	NA	-23	True	AATAAA	-20	NA	40226689	40222207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40223304_40223387_40223547_40224487_40224644_40224721_40224812_40226374
transcript_106951.known	chr19	-	1783	4	FSM	ENSG00000105219.10	ENST00000221818.5	1783	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	5.09901951359278	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGAGCGCTCTCTGCCC	-40226639	False	NA	-30	True	AATAAA	-13	NA	40226657	40222214	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40223304_40223387_40223643_40224487_40224644_40226374
transcript_106958.known	chr19	-	5250	14	FSM	ENSG00000105221.18	ENST00000392038.7	5250	14	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_13	10.5538910068569	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGCTGGTGCTTTTGTTT	-40275777	True	NA	-1	True	AATAAA	-18	NA	40285345	40230316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40233952_40235044_40235148_40235262_40235351_40235889_40236105_40236256_40236386_40237968_40238092_40238904_40238974_40240044_40240111_40241937_40242070_40242533_40242688_40255157_40255270_40256925_40257055_40265221_40265352_40285180
transcript_10696.known	chr1	-	3044	14	FSM	ENSG00000153898.13	ENST00000370608.8	3044	14	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_2	4.10656855847358	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCATTCTTACTATTTT	-84996762	True	NA	-1	True	AATAAA	-19	NA	84997113	84925582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_84926722_84929557_84929680_84931361_84931569_84937754_84937878_84937980_84938083_84939552_84939703_84940878_84940992_84947032_84947133_84952242_84952340_84952445_84952531_84956430_84956585_84958528_84958703_84965548_84965709_84996795
transcript_106963.known	chr19	-	1795	13	FSM	ENSG00000105221.18	ENST00000391844.8	1795	13	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_12	17.065844706769	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGACTCGCATTTGGAAG	-40275805	True	NA	NA	False	NA	NA	NA	40285373	40233669	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40233952_40235044_40235148_40235262_40235351_40235889_40236105_40236256_40236386_40237968_40238092_40238904_40238974_40240044_40240111_40241937_40242070_40242533_40242688_40255157_40255270_40256925_40257055_40285180
transcript_106973.known	chr19	+	1906	13	FSM	ENSG00000105223.20	ENST00000356508.9	1906	13	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	584.207648348504	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGTGCCTGACTGAGT	40343122	True	NA	14	True	AGTAAA	-14	NA	40348699	40378483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_40348725_40365552_40365586_40366418_40366511_40366609_40366685_40366772_40366916_40367695_40367880_40369907_40370029_40370109_40370238_40371672_40371874_40374480_40374621_40376608_40376775_40377785_40377886_40377985
transcript_106976.nic	chr19	+	2493	13	NIC	ENSG00000105223.20	novel	1906	13	NA	NA	2	0	intron_retention	TRUE	canonical	3	78	junction_1	432.223988678196	1338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGTGCCTGACTGAGT	NA	False	NA	14	True	AGTAAA	-14	NA	40348457	40378483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_40348725_40365552_40365931_40366418_40366511_40366609_40366685_40366772_40366916_40367695_40367880_40369907_40370029_40370109_40370238_40371672_40371874_40374480_40374621_40376608_40376775_40377785_40377886_40377985
transcript_106982.nic	chr19	+	2449	13	NIC	ENSG00000105223.20	novel	2180	13	NA	NA	-38	0	intron_retention	FALSE	canonical	3	351	junction_1	359.951810046228	1912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGTGCCTGACTGAGT	NA	False	NA	14	True	AGTAAA	-14	NA	40348545	40378483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_40348769_40365552_40365931_40366418_40366511_40366609_40366685_40366772_40366916_40367695_40367880_40369907_40370029_40370109_40370238_40371672_40371874_40374480_40374621_40376608_40376775_40377785_40377886_40377985
transcript_106984.known	chr19	+	2180	13	FSM	ENSG00000105223.20	ENST00000409587.5	2180	13	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_2	566.346674357284	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGTGCCTGACTGAGT	40343107	True	NA	14	True	AGTAAA	-14	NA	40348684	40378483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_40348769_40365717_40365931_40366383_40366511_40366609_40366685_40366772_40366916_40367695_40367880_40369907_40370029_40370109_40370238_40371672_40371874_40374480_40374621_40376608_40376775_40377785_40377886_40377985
transcript_106985.known	chr19	+	2137	13	FSM	ENSG00000105223.20	ENST00000409735.9	2137	13	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	417.839175268295	1619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGCCTGACTGAGTGG	40343117	True	NA	16	True	AGTAAA	-16	NA	40348694	40378485	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_40348769_40365717_40365931_40366418_40366511_40366609_40366685_40366772_40366916_40367695_40367880_40369907_40370029_40370109_40370238_40371672_40371874_40374480_40374621_40376608_40376775_40377785_40377886_40377985
transcript_106989.nic	chr19	+	2302	13	NIC	ENSG00000105223.20	novel	2180	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	443.971306317574	1296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGTGCCTGACTGAGT	40348508	False	NA	14	True	AGTAAA	-14	NA	40348583	40378483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_40348769_40365661_40365931_40366418_40366511_40366609_40366685_40366772_40366916_40367695_40367880_40369907_40370029_40370109_40370238_40371672_40371874_40374480_40374621_40376608_40376775_40377785_40377886_40377985
transcript_107001.known	chr19	+	1966	12	FSM	ENSG00000105223.20	ENST00000409419.5	1966	12	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	469.768186194351	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTACAGCCTGTGCCT	40343100	True	NA	6	True	AGTAAA	-6	NA	40348677	40378475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_40348769_40366383_40366511_40366609_40366685_40366772_40366916_40367695_40367880_40369907_40370029_40370109_40370238_40371672_40371874_40374480_40374621_40376608_40376775_40377785_40377886_40377985
transcript_10701.known	chr1	-	2810	13	FSM	ENSG00000055732.13	ENST00000370589.7	2810	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	5.40254569624358	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGATGAAGTAATTATT	-85048124	True	NA	1	True	ATTAAA	-17	NA	85048500	85018081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_85019258_85021069_85021277_85022069_85022193_85022298_85022401_85025938_85026089_85026171_85026285_85029105_85029206_85032695_85032793_85032871_85032957_85034097_85034252_85041009_85041178_85045132_85045363_85048395
transcript_107021.known	chr19	-	2126	9	FSM	ENSG00000160392.14	ENST00000392035.6	2126	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	27.4226184016042	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTCCCCCACTCCTTCA	-40347048	True	NA	-15	True	AATATA	-18	NA	40348386	40321062	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40322377_40324005_40324077_40326333_40326487_40328412_40328551_40333850_40333930_40336109_40336225_40336319_40336408_40341785_40341891_40348323
transcript_107022.known	chr19	-	3611	9	FSM	ENSG00000160392.14	ENST00000683109.1	3611	9	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	11.6619037896906	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGGGCCTGGTAATACC	-40347059	True	NA	NA	False	NA	NA	NA	40348397	40319535	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40322377_40324005_40324077_40326333_40326487_40328412_40328551_40333850_40333930_40336109_40336225_40336319_40336408_40341838_40341891_40348323
transcript_107023.known	chr19	-	3628	9	FSM	ENSG00000160392.14	ENST00000582783.5	3628	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	32.566998249762	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGGGCCTGGTAATACC	NA	False	NA	NA	False	NA	NA	NA	40348527	40319535	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40322377_40324005_40324077_40326333_40326487_40328412_40328551_40333850_40333930_40336109_40336225_40336319_40336408_40341838_40341891_40348436
transcript_10703.known	chr1	-	1762	12	FSM	ENSG00000055732.13	ENST00000341115.8	1762	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	8.98759475633677	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTATTGGATTATTATT	-85048070	True	NA	NA	False	TTTAAA	-16	NA	85048446	85018907	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_85019258_85021069_85021277_85022069_85022193_85022298_85022401_85025938_85026089_85026171_85026285_85029105_85029206_85032695_85032793_85032871_85032957_85034097_85034252_85045132_85045363_85048395
transcript_107031.known	chr19	-	4867	7	FSM	ENSG00000105227.16	ENST00000324001.8	4867	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	7.49258893099634	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTATTTGTCTCCTCT	-40412720	True	NA	-6	True	AATAAA	-15	NA	40413378	40393767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40397971_40398619_40398817_40403705_40403863_40407905_40408032_40408157_40408257_40408339_40408384_40413337
transcript_107033.known	chr19	-	4985	3	FSM	ENSG00000105227.16	ENST00000673881.1	4985	3	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_2	1.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTATTTGTCTCCTCTGT	-40403630	False	658	-4	True	AATAAA	-17	NA	40404288	40393765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40397971_40398619_40398817_40403705
transcript_107034.known	chr19	-	2084	2	FSM	ENSG00000197019.5	ENST00000357949.5	2084	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTGGGCAAAGGATAGGG	-40425723	True	NA	NA	False	AATAAA	-20	NA	40425992	40421588	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40423547_40425866
transcript_107039.known	chr19	-	1364	2	FSM	ENSG00000167565.13	ENST00000322354.4	1364	2	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	0	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTTGTCTAATGTTTCT	-40441495	True	NA	42	True	AATAAA	-17	NA	40444335	40440843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40442087_40444214
transcript_107040.known	chr19	-	747	2	FSM	ENSG00000167565.13	ENST00000599706.1	747	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTCTTGGGAGTGGAATG	-40443984	False	2840	NA	False	NA	NA	NA	40444062	40441547	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40442087_40443854
transcript_107042.known	chr19	-	767	5	FSM	ENSG00000090013.11	ENST00000643596.1	767	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	186.70632019297	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAACCGACTGTGTGACT	-40463305	True	NA	-11	True	AATAAA	-30	NA	40465759	40447794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40448047_40451363_40451493_40458173_40458245_40458380_40458546_40465609
transcript_107043.known	chr19	-	649	4	FSM	ENSG00000090013.11	ENST00000595483.5	649	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	165.481116747501	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGACTGTGTGACTCTTCCT	-40463291	True	NA	-5	True	AATAAA	-36	NA	40465745	40447788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40448047_40458154_40458245_40458380_40458546_40465609
transcript_107044.known	chr19	-	938	4	FSM	ENSG00000090013.11	ENST00000643519.1	938	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	186.005376266386	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTCTGTCTGAGTATTT	-40463310	True	NA	19	True	NA	NA	NA	40465764	40447764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40448047_40451363_40451493_40458173_40458546_40465609
transcript_107046.known	chr19	+	6105	27	FSM	ENSG00000160460.17	ENST00000595535.5	6105	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.88461538461538	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGTGTGGCGCCTCTGT	NA	False	NA	NA	False	NA	NA	NA	40466240	40560507	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_40466312_40472606_40472791_40487696_40487849_40490074_40490249_40492962_40493055_40494896_40494978_40497488_40497605_40501920_40502034_40502127_40502316_40502389_40502508_40502774_40502934_40503829_40504133_40506235_40506387_40512605_40513555_40515310_40515449_40519400_40520152_40523436_40523640_40529040_40529132_40532624_40532772_40534079_40534344_40549188_40549414_40550237_40550328_40554146_40554426_40554515_40554647_40556083_40556289_40557022_40557404_40560158
transcript_107047.known	chr19	+	2419	10	FSM	ENSG00000160460.17	ENST00000392023.1	2419	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	2.16024689946929	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCTCAGTGGCTTCATTA	40530453	True	NA	NA	False	NA	NA	NA	40530487	40560752	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_40530591_40532624_40532772_40534079_40534344_40549188_40549414_40550237_40550328_40554146_40554426_40554515_40554647_40556083_40556289_40557022_40557404_40560158
transcript_107048.known	chr19	+	525	4	FSM	ENSG00000160460.17	ENST00000599926.5	525	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	5.79271573232759	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCCAACACTGAGGACGC	40570901	True	NA	NA	False	NA	NA	NA	40571038	40575663	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_40571094_40572018_40572193_40572337_40572381_40575410
transcript_107055.known	chr19	+	2341	18	FSM	ENSG00000160410.15	ENST00000291842.10	2341	18	0	0	0	0	multi-exon	TRUE	canonical	3	387	junction_12	33.4805629714587	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTGCTTATTCTTAGCA	40574213	True	NA	15	True	AATAAA	-15	NA	40576872	40591397	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_40576986_40577230_40577285_40577395_40577442_40577556_40577631_40578153_40578213_40578461_40578543_40580323_40580486_40580565_40580657_40580745_40580937_40582350_40582467_40583397_40583486_40583600_40583718_40586773_40586945_40588623_40588780_40589081_40589179_40590243_40590423_40590729_40590854_40590975
transcript_10706.known	chr1	-	2777	11	FSM	ENSG00000055732.13	ENST00000490600.6	2777	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	7.48398289682706	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAATAGAAAAAAAAAACAGA	-85048123	True	NA	NA	False	NA	NA	NA	85048499	85024556	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_85026089_85026171_85026285_85029105_85029206_85032695_85032793_85032871_85032957_85034097_85034252_85036709_85036869_85041009_85041178_85045132_85045363_85047574_85047610_85048395
transcript_107068.known	chr19	+	1993	16	FSM	ENSG00000160410.15	ENST00000600718.5	1993	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	119.065173562867	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTCCCCAATAAAGTCCT	40574256	False	NA	-14	True	NA	NA	NA	40576915	40591368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_40576986_40577230_40577285_40577395_40577442_40577556_40577631_40578153_40578213_40578461_40578543_40580323_40580486_40580565_40580657_40580745_40580937_40582350_40582467_40583397_40583486_40583600_40583718_40586773_40586945_40588623_40588780_40590729_40590854_40590975
transcript_107077.known	chr19	+	2339	16	FSM	ENSG00000160410.15	ENST00000594973.5	2339	16	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_10	34.0642530129949	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATCTTGCTTATTCTTAG	40577218	False	NA	13	True	AATAAA	-13	NA	40577228	40591395	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_40577442_40577556_40577631_40578153_40578213_40578461_40578543_40580323_40580486_40580565_40580657_40580745_40580937_40582350_40582467_40583397_40583486_40583600_40583718_40586773_40586945_40588623_40588780_40589081_40589179_40590243_40590423_40590729_40590854_40590975
transcript_107078.known	chr19	+	4948	33	FSM	ENSG00000090006.18	ENST00000308370.11	4948	33	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_14	67.1945563155045	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTATGTGCACGGGGCCG	40596403	True	NA	NA	False	NA	NA	NA	40597234	40629623	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_40597381_40599196_40599256_40599420_40599557_40600067_40600178_40605034_40605227_40605404_40605653_40605728_40605832_40606232_40606308_40606403_40606527_40607364_40607530_40608219_40608370_40608483_40608604_40609529_40609662_40609745_40609872_40610531_40610658_40611151_40611395_40611858_40611985_40612072_40612193_40613064_40613197_40613403_40613530_40613915_40614039_40614314_40614447_40616888_40617021_40617099_40617226_40619346_40619494_40622400_40622668_40622949_40623022_40623603_40623733_40623935_40624083_40625856_40626010_40626974_40627356_40627704_40627858_40629395
transcript_107098.nic	chr19	+	2598	14	ISM	ENSG00000090006.18	ENST00000243562.13	3140	19	3570	0	-57	0	3prime_fragment	FALSE	canonical	3	58	junction_4	67.4073547863283	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTTGCCTCCTCCTGTC	40613166	False	NA	15	True	ATTAAA	-16	NA	40613315	40629817	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_40613530_40613915_40614039_40614314_40614447_40616888_40617021_40617099_40617226_40619346_40619494_40622400_40622668_40622949_40623022_40623603_40623733_40623935_40624083_40625856_40626010_40626974_40627356_40627704_40627858_40629395
transcript_107100.nic	chr19	+	2472	13	NIC	ENSG00000090006.18	novel	3140	19	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_4	69.6113715965686	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTTGCCTCCTCCTGTC	40613166	False	NA	15	True	ATTAAA	-16	NA	40613315	40629817	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_40613530_40613915_40614039_40614314_40614447_40616888_40617021_40619346_40619494_40622400_40622668_40622949_40623022_40623603_40623733_40623935_40624083_40625856_40626010_40626974_40627356_40627704_40627858_40629395
transcript_107102.nic	chr19	+	2466	13	NIC	ENSG00000090006.18	novel	3140	19	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_3	70.2093595375052	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTTGCCTCCTCCTGTC	40613166	False	NA	15	True	ATTAAA	-16	NA	40613315	40629817	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_40613530_40613915_40614039_40614314_40614447_40617099_40617226_40619346_40619494_40622400_40622668_40622949_40623022_40623603_40623733_40623935_40624083_40625856_40626010_40626974_40627356_40627704_40627858_40629395
transcript_107104.nic	chr19	+	2040	12	ISM	ENSG00000090006.18	ENST00000308370.11	4948	33	-95	20702	-95	0	5prime_fragment	FALSE	canonical	3	52	junction_10	8.62439361864103	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCAGGGCATTGATGGG	40597109	False	NA	NA	False	NA	NA	NA	40597139	40608921	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_40597381_40599196_40599256_40599420_40599557_40600067_40600178_40605034_40605227_40605404_40605653_40605728_40605832_40606232_40606308_40606403_40606527_40607364_40607530_40608219_40608370_40608483
transcript_107111.nic	chr19	+	2340	12	NIC	ENSG00000090006.18	novel	3140	19	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_3	57.1750971624639	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTTGCCTCCTCCTGTC	40613166	False	NA	15	True	ATTAAA	-16	NA	40613315	40629817	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_40613530_40613915_40614039_40614314_40614447_40619346_40619494_40622400_40622668_40622949_40623022_40623603_40623733_40623935_40624083_40625856_40626010_40626974_40627356_40627704_40627858_40629395
transcript_107112.nic	chr19	+	2730	11	NIC	ENSG00000090006.18	novel	4948	33	NA	NA	-95	0	intron_retention	FALSE	canonical	3	68	junction_7	5.87877538267963	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCAGGGCATTGATGGG	40597109	False	NA	NA	False	NA	NA	NA	40597139	40608921	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_40597381_40599196_40599256_40599420_40599557_40600067_40600178_40605034_40605227_40605404_40605653_40605728_40605832_40606232_40606308_40606403_40606527_40607364_40608370_40608483
transcript_107124.nic	chr19	+	2182	10	ISM	ENSG00000090006.18	ENST00000595118.5	2446	11	540	0	-6	0	3prime_fragment	FALSE	canonical	3	85	junction_1	57.7705123637088	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTTGCCTCCTCCTGTC	40614073	False	NA	15	True	ATTAAA	-16	NA	40614135	40629817	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_40614447_40619346_40619494_40622400_40622668_40622949_40623022_40623603_40623733_40623935_40624083_40625856_40626010_40626974_40627356_40627704_40627858_40629395
transcript_107130.known	chr19	+	1700	8	FSM	ENSG00000090006.18	ENST00000318809.11	1700	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	89.3116533749736	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACCTGGAGAAGGGACCT	40614048	False	NA	NA	False	NA	NA	NA	40614110	40629649	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_40614447_40619346_40619494_40623603_40623733_40623935_40624083_40625856_40626010_40626974_40627356_40627704_40627858_40629395
transcript_107132.known	chr19	+	2446	11	FSM	ENSG00000090006.18	ENST00000595118.5	2446	11	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_2	54.8740375769817	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTTGCCTCCTCCTGTC	40613201	True	NA	15	True	ATTAAA	-16	NA	40613595	40629817	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_40614039_40614314_40614447_40619346_40619494_40622400_40622668_40622949_40623022_40623603_40623733_40623935_40624083_40625856_40626010_40626974_40627356_40627704_40627858_40629395
transcript_107133.known	chr19	-	3561	10	FSM	ENSG00000105245.9	ENST00000252891.8	3561	10	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	14.3973591542784	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTGGTTGATTTTGTGC	-40689112	True	NA	0	True	TATAAA	-27	NA	40690651	40665904	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40668139_40669897_40670021_40673343_40673650_40677231_40677422_40680916_40681058_40682727_40682803_40682893_40682969_40684416_40684557_40686910_40686996_40690459
transcript_107136.known	chr19	-	2249	9	FSM	ENSG00000105245.9	ENST00000598779.5	2249	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	31.2839815240963	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCCCATGCACAGCACAA	-40689014	False	NA	NA	False	NA	NA	NA	40690553	40667033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40668139_40669897_40670021_40673343_40673650_40677231_40677422_40680916_40681058_40682727_40682803_40682893_40682969_40684416_40684557_40690459
transcript_107139.known	chr19	-	2297	16	FSM	ENSG00000123815.13	ENST00000677018.1	2297	16	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_15	54.9405335087149	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	-40715275	True	NA	12	True	AATAAA	-33	NA	40716882	40691513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716586_40716704_40716861
transcript_10714.known	chr1	-	3000	3	FSM	ENSG00000097096.9	ENST00000234668.6	3000	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAT	-85200502	False	NA	NA	False	NA	NA	NA	85200513	85181158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_85183201_85190056_85190753_85200251
transcript_107142.known	chr19	-	2237	15	FSM	ENSG00000123815.13	ENST00000678419.1	2237	15	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_14	48.4473204330524	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	-40714979	False	1607	12	True	AATAAA	-33	NA	40714990	40691513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40714912
transcript_107145.known	chr19	-	2305	15	FSM	ENSG00000123815.13	ENST00000679130.1	2305	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	51.1931616128401	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	-40715841	False	NA	12	True	AATAAA	-33	NA	40715852	40691513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40715706
transcript_107147.known	chr19	-	2443	15	FSM	ENSG00000123815.13	ENST00000324464.8	2443	15	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_14	38.5687829780532	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGCTCTTTTCTCTGCG	-40715279	True	NA	-4	True	AATAAA	-17	NA	40716886	40691529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716586
transcript_107148.known	chr19	-	2194	15	FSM	ENSG00000123815.13	ENST00000594720.6	2194	15	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_14	42.0031582874723	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	-40715289	True	NA	12	True	AATAAA	-33	NA	40716896	40691513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716861
transcript_107150.known	chr19	-	2270	15	FSM	ENSG00000123815.13	ENST00000678316.1	2270	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	60.9644007865681	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	-40716711	False	1607	12	True	AATAAA	-33	NA	40716722	40691513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705349_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716586
transcript_107163.known	chr19	-	2350	14	FSM	ENSG00000123815.13	ENST00000678119.1	2350	14	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_13	50.2093840683264	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	-40714949	False	1607	12	True	AATAAA	-33	NA	40714960	40691513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40714912
transcript_107164.known	chr19	-	2512	14	FSM	ENSG00000123815.13	ENST00000678433.1	2512	14	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	62.0266215035764	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	-40716789	False	NA	12	True	AATAAA	-33	NA	40716800	40691513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700448_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716586
transcript_107165.known	chr19	-	2335	14	FSM	ENSG00000123815.13	ENST00000679002.1	2335	14	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_13	43.4765801064375	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	-40715287	True	NA	12	True	AATAAA	-33	NA	40716894	40691513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716861
transcript_107198.known	chr19	+	3376	7	FSM	ENSG00000086544.3	ENST00000263370.3	3376	7	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_6	9.26762584963856	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCGTAGAGCTTTTTATTT	40716285	True	NA	12	True	AATAAA	-19	NA	40717111	40740860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_40718291_40725339_40725440_40729201_40729416_40733159_40733365_40736985_40737088_40737697_40737770_40739356
transcript_1072.known	chr1	+	3034	20	FSM	ENSG00000197530.13	ENST00000489635.5	3034	20	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_3	124.323989212174	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTTGCCTCTGCTGTCTGC	1614987	True	NA	10	True	TATAAA	-16	NA	1615495	1630604	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1615634_1616507_1616615_1623388_1623483_1623773_1623946_1624794_1624902_1624990_1625186_1625285_1625429_1625545_1625654_1626649_1626755_1626836_1627000_1627073_1627208_1627295_1627445_1627672_1627830_1628018_1628180_1628272_1628400_1628488_1628723_1629132_1629312_1629384_1629567_1629638_1629705_1630291
transcript_10720.known	chr1	-	3391	4	FSM	ENSG00000162642.14	ENST00000294661.8	3391	4	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_2	80.7066016850887	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCCAGTCTCTGGTATGT	-85250206	True	NA	-3	True	ATTAAA	-16	NA	85259672	85249952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_85252703_85258523_85258723_85258934_85259062_85259357
transcript_107201.nic	chr19	+	1308	7	NIC	ENSG00000077312.9	novel	1277	6	NA	NA	-104	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_1	595.407540167984	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTCTGTCTGATTTT	NA	False	NA	37	True	ATTAAA	-30	NA	40750762	40765389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_40750978_40751386_40751482_40757331_40757505_40759430_40759611_40762900_40763075_40763586_40763676_40765007
transcript_107204.nic	chr19	+	1188	7	NIC	ENSG00000077312.9	novel	1277	6	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	605.059891434081	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTCTGTCTGATTTT	NA	False	NA	37	True	ATTAAA	-30	NA	40750842	40765389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_40750938_40751386_40751482_40757331_40757505_40759430_40759611_40762900_40763075_40763586_40763676_40765007
transcript_107212.nic	chr19	-	2682	7	NIC	ENSG00000188493.15	novel	3302	6	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	44.816911490592	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTCTGAATGTTCTGTT	-40747849	True	NA	-9	True	AATAAA	-14	NA	40750534	40740860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_40742771_40743904_40743976_40744066_40744197_40744558_40744684_40745129_40745199_40749480_40749608_40750284
transcript_107217.known	chr19	+	969	6	FSM	ENSG00000077312.9	ENST00000601393.1	969	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	652.032943952988	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTGCCAAGAAGTAGCAC	40736405	True	NA	NA	False	NA	NA	NA	40751208	40765150	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_40751482_40757331_40757442_40759430_40759611_40762900_40763075_40763586_40763676_40765007
transcript_107218.known	chr19	+	1277	6	FSM	ENSG00000077312.9	ENST00000243563.8	1277	6	0	0	0	0	multi-exon	FALSE	canonical	3	1551	junction_5	57.6180527265544	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTCTGTCTGATTTT	40736399	True	NA	37	True	ATTAAA	-30	NA	40751202	40765389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_40751482_40757331_40757505_40759430_40759611_40762900_40763075_40763586_40763676_40765007
transcript_107223.known	chr19	-	3302	6	FSM	ENSG00000188493.15	ENST00000378313.7	3302	6	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	31.0251510874645	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTCTGAATGTTCTGTT	-40747792	True	NA	-9	True	AATAAA	-14	NA	40750477	40740860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40742771_40743904_40743976_40744066_40744197_40744558_40744684_40745129_40745199_40749480
transcript_107224.known	chr19	-	2521	6	FSM	ENSG00000188493.15	ENST00000470681.5	2521	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	52.1022072469104	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGTTCTGTTTATTG	-40747807	True	NA	-4	True	AATAAA	-19	NA	40750492	40740855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40742771_40743904_40743982_40744558_40744684_40745129_40745199_40749480_40749608_40750284
transcript_107230.known	chr19	-	373	5	FSM	ENSG00000123815.13	ENST00000596357.1	373	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	81.9858981776744	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGAAGTCCATGCCAGGA	-40715060	False	1607	NA	False	GGGGCT	-21	NA	40715071	40710094	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40715032
transcript_107232.known	chr19	-	2822	5	FSM	ENSG00000123815.13	ENST00000676651.1	2822	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	66.9290669291004	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATACAAAAAATTAGCTGGA	-40715279	True	NA	NA	False	ACTAAA	-1	NA	40716886	40707631	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716861
transcript_107237.known	chr19	-	2201	15	FSM	ENSG00000123815.13	ENST00000601967.6	2201	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_14	46.2085445760493	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	-40715087	False	1607	12	True	AATAAA	-33	NA	40715098	40691513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40715056
transcript_107238.known	chr19	-	2041	14	FSM	ENSG00000123815.13	ENST00000243583.10	2041	14	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_9	68.6525425431071	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGCTCTTTTCTCTGCG	-40715062	False	1607	-4	True	AATAAA	-17	NA	40715073	40691529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40715052
transcript_107239.known	chr19	-	2451	15	FSM	ENSG00000123815.13	ENST00000678404.1	2451	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_14	50.943145580467	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	-40715605	False	NA	12	True	AATAAA	-33	NA	40715616	40691513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40715324
transcript_107240.known	chr19	+	2774	12	FSM	ENSG00000171570.11	ENST00000594136.2	2774	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	397.220445904573	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCAGAGCTGCACACATC	40776119	True	NA	7	True	AATAAA	-6	NA	40778270	40808418	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_40778392_40780018_40780100_40780384_40780500_40783777_40783841_40783920_40784076_40786664_40786761_40786847_40786979_40800338_40801416_40806554_40806675_40807137_40807275_40807483_40807552_40807808
transcript_107242.known	chr19	+	1173	8	FSM	ENSG00000167578.18	ENST00000594800.5	1173	8	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_7	97.0444880096815	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTGACTGTAGCAGATCC	40776064	True	NA	NA	False	AATATA	-18	NA	40778215	40792572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_40778392_40780018_40780100_40780384_40780500_40783777_40783841_40783920_40784076_40786664_40786761_40786847_40786979_40792216
transcript_107243.known	chr19	+	1159	8	FSM	ENSG00000167578.18	ENST00000357052.8	1159	8	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_2	25.4109087935533	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGGCCTCCATTATTG	40776095	True	NA	8	True	CATAAA	-17	NA	40778246	40796942	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_40778392_40780018_40780100_40780384_40780500_40783777_40783841_40783920_40784076_40786664_40786761_40786847_40786979_40796569
transcript_10725.known	chr1	-	3254	3	FSM	ENSG00000162642.14	ENST00000471115.6	3254	3	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_2	123.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCCAGTCTCTGGTATGT	-85250196	True	NA	-3	True	ATTAAA	-16	NA	85259662	85249952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_85252703_85258523_85258723_85259357
transcript_107275.known	chr19	+	2100	6	FSM	ENSG00000269858.6	ENST00000303961.9	2100	6	0	0	0	0	multi-exon	FALSE	canonical	3	900	junction_1	67.1702315017598	3956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGACTCCATCTGCAAT	40791709	True	NA	23	True	AATAAA	-22	NA	40799190	40808434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_40799263_40800338_40801416_40806554_40806675_40807137_40807275_40807483_40807552_40807808
transcript_107280.nic	chr19	+	2296	6	NIC	ENSG00000269858.6	novel	2150	6	NA	NA	12	0	intron_retention	FALSE	canonical	3	21	junction_1	410.742060178891	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATCTGACTCCATCTGCA	40791955	False	NA	21	True	AATAAA	-20	NA	40799436	40808432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_40799707_40800338_40801416_40806554_40806675_40807137_40807275_40807483_40807552_40807808
transcript_107281.known	chr19	+	2150	6	FSM	ENSG00000269858.6	ENST00000406058.6	2150	6	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_1	417.518574437114	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATCTGACTCCATCTGCA	40799498	False	NA	21	True	AATAAA	-20	NA	40799514	40808432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_40799639_40800338_40801416_40806554_40806675_40807137_40807275_40807483_40807552_40807808
transcript_1073.known	chr1	+	3236	20	FSM	ENSG00000197530.13	ENST00000520777.6	3236	20	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	127.14774271081	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGCCTCTGCTGTCTGCC	1614991	True	NA	11	True	TATAAA	-17	NA	1615499	1630605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1615634_1616507_1616615_1623388_1623700_1623773_1623946_1624794_1624902_1624990_1625186_1625285_1625429_1625557_1625654_1626649_1626755_1626836_1627000_1627073_1627208_1627295_1627445_1627672_1627830_1628018_1628180_1628272_1628400_1628488_1628723_1629132_1629312_1629384_1629567_1629638_1629705_1630291
transcript_107301.known	chr19	-	1004	3	FSM	ENSG00000237118.3	ENST00000641827.1	1004	3	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGAATGAGAGTCATTTA	NA	False	NA	NA	False	ATTAAA	-1	NA	40826471	40818413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_40818900_40825119_40825262_40826095
transcript_107304.nic	chr19	+	2931	8	ISM	ENSG00000197408.10	ENST00000324071.10	3071	9	12664	0	0	0	3prime_fragment	FALSE	canonical	3	28	junction_3	20.4829446224942	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGATCTGTGCCATTTT	41002782	True	NA	21	True	AATAAA	-31	NA	41003945	41018398	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_41004164_41004296_41004447_41006904_41007066_41009218_41009396_41009993_41010136_41012297_41012486_41012673_41012816_41016645
transcript_107308.nnic	chr19	+	2721	7	NIC	ENSG00000197408.10	novel	3071	9	NA	NA	49	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_2	20.631690833925	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGATCTGTGCCATTTT	41002831	True	NA	21	True	AATAAA	-31	NA	41003994	41018398	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_41004164_41004296_41004447_41009218_41009396_41009993_41010136_41012297_41012486_41012673_41012816_41016645
transcript_107310.known	chr19	+	1426	5	FSM	ENSG00000197408.10	ENST00000593831.1	1426	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	33.4776044543214	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTCACATAACATAAAAT	41002782	True	NA	NA	False	TTTAAA	-11	NA	41003945	41017373	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41004164_41004296_41004447_41012297_41012486_41012673_41012816_41016645
transcript_10732.known	chr1	-	2833	3	FSM	ENSG00000142867.14	ENST00000648566.1	2833	3	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	5.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTAGGTTTGTGGGTTTTTG	-85276608	True	NA	NA	False	AATAAA	-18	NA	85276632	85265775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_85267983_85270617_85270907_85276295
transcript_10733.known	chr1	-	776	3	FSM	ENSG00000142867.14	ENST00000620248.2	776	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	71	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGCCTTTTAATTTTT	-85276432	False	NA	NA	False	NA	NA	NA	85276456	85267623	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_85267950_85270617_85270907_85276295
transcript_107331.known	chr19	+	2612	9	FSM	ENSG00000167600.14	ENST00000310054.9	2612	9	0	0	0	0	multi-exon	FALSE	canonical	3	1251	junction_5	81.8725190463809	1942	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTGTGTGACCCGTGTC	41178677	True	NA	18	True	ATTAAA	-24	NA	41193218	41207539	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41193442_41194543_41194710_41197778_41197929_41198461_41198623_41198708_41198889_41201230_41201373_41203449_41203638_41205957_41206100_41206279
transcript_107334.known	chr19	+	4717	20	FSM	ENSG00000167601.12	ENST00000301178.9	4717	20	0	0	0	0	multi-exon	TRUE	canonical	3	42	junction_9	26.3368336909406	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTGTCTCCTCTTGTCT	41216336	True	NA	17	True	CATAAA	-18	NA	41219222	41261766	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41219478_41220635_41220859_41221145_41221247_41221879_41222057_41230966_41231048_41231182_41231299_41237943_41238155_41238469_41238610_41239163_41239315_41239693_41239721_41242882_41243016_41243615_41243708_41248513_41248610_41248742_41248821_41252350_41252444_41252845_41252968_41253598_41253709_41256451_41256612_41257492_41257630_41259552
transcript_107337.known	chr19	+	3206	19	FSM	ENSG00000167601.12	ENST00000359092.7	3206	19	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_9	14.8578656892404	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTTTTTTTTTTTTTTTT	41216348	True	NA	8	True	ATTAAA	-19	NA	41219234	41260294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41219478_41220635_41220859_41221145_41221247_41221879_41222057_41230966_41231048_41231182_41231299_41237943_41238155_41238469_41238610_41239163_41239315_41242882_41243016_41243615_41243708_41248513_41248610_41248742_41248821_41252350_41252444_41252845_41252968_41253598_41253709_41256451_41256612_41257492_41257630_41259552
transcript_107342.known	chr19	+	2557	17	FSM	ENSG00000167601.12	ENST00000593513.1	2557	17	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	38.7644630267207	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGGTTTCAAAGATGCTG	41226734	False	NA	-82	True	TTTAAA	-19	NA	41226754	41260204	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41226913_41230966_41231048_41231182_41231299_41237943_41238155_41238469_41238610_41239163_41239315_41239693_41239721_41242882_41243016_41243615_41243708_41248513_41248610_41248742_41248821_41252350_41252444_41252845_41252968_41253598_41253709_41256451_41256612_41257492_41257630_41259552
transcript_107352.known	chr19	+	3426	15	FSM	ENSG00000105323.18	ENST00000352456.7	3426	15	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_13	293.530932208627	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAATGTGTTTGCCCTG	41253471	True	NA	17	True	NA	NA	NA	41262495	41307598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41262583_41268222_41268346_41272081_41272236_41273981_41274056_41276158_41276299_41279076_41279177_41281162_41281276_41292244_41292512_41294337_41294461_41294557_41294687_41301535_41301705_41302664_41302950_41303971_41304262_41305645_41305868_41306448
transcript_107355.known	chr19	+	2794	15	FSM	ENSG00000105323.18	ENST00000595018.5	2794	15	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_1	211.008620096673	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATCAAAACTTA	41253494	True	NA	18	True	NA	NA	NA	41262518	41307019	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41262583_41268222_41268346_41272081_41272236_41273981_41274056_41276158_41276299_41279076_41279177_41281162_41281276_41292244_41292512_41294337_41294461_41294557_41294687_41301535_41301705_41302664_41302950_41303971_41304262_41305675_41305868_41306448
transcript_107362.nic	chr19	+	3425	15	NIC	ENSG00000105323.18	novel	3925	15	NA	NA	-207	0	intron_retention	FALSE	canonical	3	240	junction_13	270.493360663927	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTTAAAAAGCAAAATGGGG	41255140	False	NA	49	True	ATTAAA	-29	NA	41264164	41307050	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_41264799_41268222_41268346_41272081_41272236_41273981_41274056_41276158_41276299_41279076_41279177_41281162_41281276_41292244_41292512_41294337_41294461_41294557_41294687_41301535_41301705_41302664_41302950_41303971_41304262_41305645_41305868_41306448
transcript_107364.known	chr19	+	3925	15	FSM	ENSG00000105323.18	ENST00000392006.8	3925	15	0	0	0	0	multi-exon	FALSE	canonical	3	528	junction_1	174.475072776624	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTGCCTGGCCCCGAT	41251371	True	NA	7	True	ATTAAA	-17	NA	41264371	41307787	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41264799_41268222_41268346_41272081_41272236_41273981_41274056_41276158_41276299_41279076_41279177_41281162_41281276_41292244_41292512_41294337_41294461_41294557_41294687_41301535_41301705_41302664_41302950_41303971_41304262_41305675_41305868_41306448
transcript_107369.known	chr19	+	3043	15	FSM	ENSG00000105323.18	ENST00000595196.5	3043	15	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	268.991161375163	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTTAAAAAGCAAAATGGGG	41251410	True	NA	49	True	ATTAAA	-29	NA	41264410	41307050	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41264693_41268222_41268346_41272081_41272236_41273981_41274056_41276158_41276299_41279076_41279177_41281162_41281276_41292244_41292512_41294337_41294461_41294557_41294687_41301535_41301705_41302664_41302950_41303971_41304262_41305675_41305868_41306448
transcript_10737.known	chr1	-	3939	6	FSM	ENSG00000153904.21	ENST00000284031.13	3939	6	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_4	12.5219806739988	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACAGTGTATGTCTCTTT	-85463021	True	NA	-2	True	AATAAA	-20	NA	85465159	85318484	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_85321569_85324739_85324884_85350414_85350535_85351505_85351580_85358747_85358848_85464742
transcript_107379.known	chr19	+	2952	15	FSM	ENSG00000105323.18	ENST00000263367.7	2952	15	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	289.007352847639	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATCAAAACTTA	41263485	True	NA	18	True	NA	NA	NA	41265121	41307019	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41265344_41268222_41268346_41272081_41272236_41273981_41274056_41276158_41276299_41279076_41279177_41281162_41281276_41292244_41292512_41294337_41294461_41294557_41294687_41301535_41301705_41302664_41302950_41303971_41304262_41305675_41305868_41306448
transcript_107392.known	chr19	+	1960	10	FSM	ENSG00000255730.5	ENST00000540732.3	1960	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	196.698741891575	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACCTCTGGTCTTTGTTT	41376532	True	NA	31	True	AATAAA	-25	NA	41376756	41425001	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41376855_41378280_41378520_41410636_41410817_41410922_41411010_41414048_41414158_41419134_41419297_41422163_41422371_41422628_41422771_41422997_41423170_41424437
transcript_107399.known	chr19	+	1742	9	FSM	ENSG00000248098.12	ENST00000269980.7	1742	9	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_5	30.0166620396073	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTCTGGTCTTTGTTTC	41393453	True	NA	32	True	AATAAA	-26	NA	41397817	41425002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41397936_41410636_41410817_41410922_41411010_41414048_41414158_41419134_41419297_41422163_41422371_41422628_41422771_41422997_41423170_41424437
transcript_10740.known	chr1	+	2278	5	FSM	ENSG00000142871.18	ENST00000451137.7	2278	5	0	0	0	0	multi-exon	FALSE	canonical	3	696	junction_3	34.5723878261251	1273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTGATTTAAGAAAACAG	85564433	True	NA	NA	False	AATAAA	-16	NA	85580760	85583950	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_85581048_85581364_85581579_85581927_85582285_85582415_85582625_85582739
transcript_107400.nic	chr19	+	1707	9	NIC	ENSG00000248098.12	novel	1742	9	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_8	152.987693541017	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTCTGGTCTTTGTTTC	41393424	True	NA	32	True	AATAAA	-26	NA	41397788	41425002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_41397936_41410636_41410817_41410922_41411010_41414048_41414158_41419134_41419297_41422163_41422371_41422628_41422771_41422997_41423170_41424501
transcript_107410.known	chr19	-	2780	7	FSM	ENSG00000105329.11	ENST00000221930.6	2780	7	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	9.9958324649159	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCCTGACTGTGCCACT	-41353708	True	NA	NA	False	NA	NA	NA	41353922	41330322	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_41331211_41332127_41332282_41341882_41342031_41342169_41342248_41344746_41344865_41348294_41348456_41352689
transcript_107415.known	chr19	-	998	6	FSM	ENSG00000077348.10	ENST00000221233.9	998	6	0	0	0	0	multi-exon	FALSE	canonical	3	588	junction_2	27.1705723163867	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGTCTGTTGAGCACCC	-41393799	True	NA	-16	True	AATAAA	-15	NA	41397359	41386373	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_41386726_41387513_41387604_41389764_41389906_41391840_41391963_41392866_41392981_41397180
transcript_107419.known	chr19	+	3329	5	FSM	ENSG00000142039.4	ENST00000269967.4	3329	5	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_4	18.5792222657462	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGCTATACGTAAATTTG	41306963	True	NA	14	True	ATTAAA	-16	NA	41310171	41324873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41310357_41316383_41316840_41319573_41319853_41320340_41320471_41322594
transcript_10742.known	chr1	+	1957	4	FSM	ENSG00000142871.18	ENST00000676007.1	1957	4	0	0	0	0	multi-exon	FALSE	canonical	3	696	junction_3	36.4264860903284	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGATTTTATTTATGGA	85580879	False	NA	5	True	NA	NA	NA	85580899	85583653	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_85581048_85581364_85581579_85581927_85582285_85582415
transcript_107421.known	chr19	-	1084	5	FSM	ENSG00000105329.11	ENST00000677934.1	1084	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	41.2515151236897	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGGATCTCTGTGTCAT	-41351497	True	NA	-7	True	ATTAAA	-13	NA	41353044	41330914	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_41331211_41332127_41332282_41344746_41344865_41348294_41348456_41352689
transcript_107423.known	chr19	-	826	5	FSM	ENSG00000077348.10	ENST00000596905.1	826	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	252.881889426665	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTATGGAATGGATGAAT	-41393782	True	NA	-57	True	NA	NA	NA	41397342	41386414	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_41386726_41387513_41387604_41389764_41389906_41391840_41391963_41397180
transcript_107428.known	chr19	+	1080	4	FSM	ENSG00000142046.15	ENST00000392002.7	1080	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	14.6590889515307	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGAGTCTGTTCGCGTGTG	41376492	True	NA	8	True	ATTAAA	-24	NA	41376532	41384083	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41376855_41378280_41378520_41382771_41382922_41383714
transcript_107429.known	chr19	+	725	4	FSM	ENSG00000142046.15	ENST00000544232.5	725	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	9.17726659862414	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGAGTCTGTTCGCGTGTG	41376515	True	NA	8	True	ATTAAA	-24	NA	41376739	41384083	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41376855_41378280_41378520_41382771_41382922_41383862
transcript_107430.known	chr19	+	864	4	FSM	ENSG00000142046.15	ENST00000436170.6	864	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	13.2748718344933	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGAGTCTGTTCGCGTGTG	41376537	False	NA	8	True	ATTAAA	-24	NA	41376577	41384083	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41376855_41378280_41378520_41382771_41382922_41383885
transcript_107431.known	chr19	-	1007	4	FSM	ENSG00000123810.9	ENST00000243578.8	1007	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	4.96655480858378	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGCCTCCTGACCCTTC	-41363854	True	NA	-1	True	AGTAAA	-20	NA	41364149	41354416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_41355014_41357896_41358023_41363431_41363524_41363957
transcript_107433.known	chr19	+	1610	3	FSM	ENSG00000142046.15	ENST00000542945.5	1610	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAGACACCCTTGCAGCC	41376548	True	NA	-15	True	ATTAAA	-1	NA	41376772	41384060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41376855_41378280_41378520_41382771
transcript_107435.known	chr19	-	1874	3	FSM	ENSG00000177191.3	ENST00000321702.2	1874	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGGGGTTGTTTTTGCA	-41428711	False	NA	-1	True	AAAACA	-18	NA	41428730	41425358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_41426811_41427283_41427571_41428595
transcript_107436.known	chr19	-	1065	6	FSM	ENSG00000105341.19	ENST00000417807.7	1065	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	153.108327663782	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCTCAGGCTGTTAGTA	-41434780	False	4759	NA	False	NA	NA	NA	41439539	41431987	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_41432409_41433271_41433435_41433536_41433674_41436391_41436473_41438217_41438415_41439473
transcript_107437.known	chr19	-	1700	6	FSM	ENSG00000105341.19	ENST00000221943.14	1700	6	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_5	21.4046723871215	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGGTTTTTCTCTCCT	-41435153	True	NA	-2	True	ATTAAA	-19	NA	41439912	41431317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_41432409_41433271_41433435_41433536_41433674_41436391_41436473_41438217_41438415_41439881
transcript_107438.known	chr19	-	1622	5	FSM	ENSG00000105341.19	ENST00000592922.6	1622	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	144.722795371013	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTCCCTGTTCAAGTT	-41435177	True	NA	-23	True	NA	NA	NA	41439936	41431338	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_41432409_41433271_41433435_41433536_41433674_41438217_41438415_41439881
transcript_107440.known	chr19	-	979	5	FSM	ENSG00000105341.19	ENST00000589970.5	979	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	164.140945531577	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCTACTACTGACACTTT	-41435149	True	NA	NA	False	NA	NA	NA	41439908	41431871	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_41432409_41433536_41433674_41436391_41436473_41438217_41438415_41439881
transcript_107441.nic	chr19	-	2590	5	NIC	ENSG00000105341.19	novel	1700	6	NA	NA	-4	0	intron_retention	FALSE	canonical	3	356	junction_4	23.4200768572607	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGTGGTTTTTCTCTCC	NA	False	NA	-3	True	ATTAAA	-18	NA	41439940	41431318	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_41433435_41433536_41433674_41436391_41436473_41438217_41438415_41439881
transcript_107443.nic	chr19	-	834	5	ISM	ENSG00000105341.19	ENST00000221943.14	1700	6	-28	1757	-4	-146	5prime_fragment	FALSE	canonical	3	356	junction_4	23.4200768572607	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGTTTTAGTCAAAACT	NA	False	NA	-14	True	ATTAAA	-20	NA	41439940	41433074	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_41433435_41433536_41433674_41436391_41436473_41438217_41438415_41439881
transcript_107444.known	chr19	-	1454	4	FSM	ENSG00000105341.19	ENST00000438807.7	1454	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	154.169459434164	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGGTTTTTCTCTCCT	-41435151	True	NA	-2	True	ATTAAA	-19	NA	41439910	41431317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_41432409_41433536_41433674_41438217_41438415_41439881
transcript_107445.known	chr19	-	572	4	FSM	ENSG00000105341.19	ENST00000595425.5	572	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	158.539865298571	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAACCCAGATGCAGGAGAG	-41435149	True	NA	NA	False	NA	NA	NA	41439908	41433223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_41433435_41433536_41433674_41438217_41438415_41439881
transcript_107447.known	chr19	+	409	3	FSM	ENSG00000270164.2	ENST00000494375.2	409	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACGTGTGATTTGATTTTT	41535504	True	NA	NA	False	AATAAA	-23	NA	41535566	41536904	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41535602_41535713_41535784_41536600
transcript_107448.known	chr19	+	1718	1	FSM	ENSG00000270164.2	ENST00000597199.1	1718	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACCACGTGTGATTTGAT	NA	False	NA	NA	False	AATAAA	-19	NA	41535182	41536900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41535200_41536900
transcript_10745.known	chr1	+	2446	4	FSM	ENSG00000142871.18	ENST00000674743.1	2446	4	0	0	0	0	multi-exon	FALSE	canonical	3	696	junction_2	39.8078719183363	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGATTCTGAAGCTAAA	85580901	False	NA	NA	False	TTTAAA	-36	NA	85580921	85583930	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_85581048_85581364_85582285_85582415_85582625_85582739
transcript_107461.known	chr19	+	2021	6	FSM	ENSG00000105372.8	ENST00000598742.6	2021	6	0	0	0	0	multi-exon	FALSE	canonical	3	28576	junction_5	7588.09788023323	11086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTTGTTTACACTCAGCAA	41589541	True	NA	13	True	AATAAA	-14	NA	41860254	41872925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41860290_41860774_41860846_41861111_41861213_41869030_41869215_41869698_41869754_41871350
transcript_107463.known	chr19	+	668	6	FSM	ENSG00000105372.8	ENST00000600467.6	668	6	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_1	16889.7345201161	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTCTGGGTCTCTTTT	41589541	True	NA	34	True	AATAAA	-16	NA	41860254	41871416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41860446_41860774_41860846_41861111_41861213_41869030_41869215_41869698_41869754_41871350
transcript_107465.known	chr19	+	526	6	FSM	ENSG00000105372.8	ENST00000593863.5	526	6	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	17018.4313072621	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTCTGGGTCTCTTTT	41859939	True	NA	34	True	AATAAA	-16	NA	41860445	41871416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41860495_41860774_41860846_41861111_41861213_41869030_41869215_41869698_41869754_41871350
transcript_107472.known	chr19	+	313	4	FSM	ENSG00000105372.8	ENST00000598261.2	313	4	0	0	0	0	multi-exon	FALSE	canonical	3	1827	junction_3	17596.528994852	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGTGTGGCCCGCCGGGT	41589564	True	NA	NA	False	NA	NA	NA	41860277	41869146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41860290_41860774_41860846_41861111_41861226_41869030
transcript_107476.known	chr19	+	500	6	FSM	ENSG00000105372.8	ENST00000221975.6	500	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17055.9203750487	10412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTCTGGGTCTCTTTT	41589543	True	NA	34	True	AATAAA	-16	NA	41860256	41871416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41860290_41860784_41860846_41861111_41861213_41869030_41869215_41869698_41869754_41871350
transcript_107477.known	chr19	+	3393	30	FSM	ENSG00000076928.18	ENST00000599846.5	3393	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	75.9522974394179	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGATCTGTGTGTGTGAT	41880480	True	NA	18	True	AATATA	-12	NA	41883183	41907448	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41883290_41888063_41888107_41888191_41888279_41888751_41888866_41892024_41892124_41892330_41892374_41892602_41892850_41893273_41893304_41894206_41894307_41894450_41894548_41894625_41894662_41895348_41895487_41896376_41896483_41897945_41898114_41898441_41898588_41901886_41902034_41902273_41902357_41902532_41902659_41902783_41902899_41903306_41903408_41903706_41903785_41904034_41904111_41904215_41904384_41904948_41905037_41905174_41905262_41905759_41905828_41905938_41906026_41906456_41906621_41906702_41906804_41907104
transcript_107482.known	chr19	+	3229	29	FSM	ENSG00000076928.18	ENST00000354532.8	3229	29	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	41.6730930418354	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGTGTGTGTGATGGCG	41880480	True	NA	22	True	AATATA	-16	NA	41883183	41907452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41883290_41888063_41888107_41888191_41888279_41888751_41888866_41892024_41892124_41892330_41892374_41892602_41892850_41893273_41893304_41894206_41894307_41894450_41894548_41894625_41894662_41895348_41895487_41896376_41896483_41898441_41898588_41901886_41902034_41902273_41902357_41902532_41902659_41902783_41902899_41903306_41903408_41903706_41903785_41904034_41904111_41904215_41904384_41904948_41905037_41905174_41905262_41905759_41905828_41905938_41906026_41906456_41906621_41906702_41906804_41907104
transcript_107488.known	chr19	+	3171	29	FSM	ENSG00000076928.18	ENST00000337665.8	3171	29	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	43.6197039355905	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGATGGCGGG	41882935	True	NA	24	True	AATATA	-18	NA	41884447	41907454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41884494_41888063_41888107_41888191_41888279_41888751_41888866_41892024_41892124_41892330_41892374_41892602_41892850_41893273_41893304_41894206_41894307_41894450_41894548_41894625_41894662_41895348_41895487_41896376_41896483_41898441_41898588_41901886_41902034_41902273_41902357_41902532_41902659_41902783_41902899_41903306_41903408_41903706_41903785_41904034_41904111_41904215_41904384_41904948_41905037_41905174_41905262_41905759_41905828_41905938_41906026_41906456_41906621_41906702_41906804_41907104
transcript_107496.known	chr19	+	3439	28	FSM	ENSG00000076928.18	ENST00000600274.5	3439	28	0	0	0	0	multi-exon	TRUE	canonical	3	142	junction_1	40.8222417118578	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGATGGCGGG	41880479	True	NA	24	True	AATATA	-18	NA	41883182	41907454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41883290_41888063_41888107_41888191_41888279_41888751_41888866_41892024_41892374_41892602_41892850_41893273_41893304_41894206_41894307_41894450_41894548_41894625_41894662_41895348_41895487_41896376_41896483_41898441_41898588_41901886_41902034_41902273_41902357_41902532_41902659_41902783_41902899_41903306_41903408_41903706_41903785_41904034_41904111_41904215_41904384_41904948_41905037_41905174_41905262_41905759_41905828_41905938_41906026_41906456_41906621_41906702_41906804_41907104
transcript_10750.known	chr1	-	6203	10	FSM	ENSG00000117174.11	ENST00000370574.4	6203	10	0	0	0	0	multi-exon	TRUE	canonical	3	98	junction_2	12.2181811501256	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGGTAACCCCTGACTT	-85703973	True	NA	NA	False	AATAAA	-20	NA	85708433	85649416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_85654099_85657846_85657972_85677235_85677314_85678700_85678782_85680835_85680905_85702156_85702261_85706077_85706164_85706248_85706356_85706441_85706508_85707628
transcript_107500.known	chr19	+	3091	28	FSM	ENSG00000076928.18	ENST00000347545.8	3091	28	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	57.5003548626254	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGATGGCGGG	41880521	True	NA	24	True	AATATA	-18	NA	41883224	41907454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41883290_41888063_41888107_41888191_41888279_41888751_41888866_41892330_41892374_41892602_41892850_41893273_41893304_41894206_41894307_41894450_41894548_41894625_41894662_41895348_41895487_41896376_41896483_41898441_41898588_41901886_41902034_41902273_41902357_41902532_41902659_41902783_41902899_41903306_41903408_41903706_41903785_41904034_41904111_41904215_41904384_41904948_41905037_41905174_41905262_41905759_41905828_41905938_41906026_41906456_41906621_41906702_41906804_41907104
transcript_107512.nic	chr19	+	3247	28	NIC	ENSG00000076928.18	novel	3171	29	NA	NA	-103	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_4	58.9294293252834	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGATCTGTGTGTGTGAT	41881563	False	NA	18	True	AATATA	-12	NA	41884266	41907448	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_41884494_41888063_41888107_41888191_41888279_41888751_41888866_41892330_41892374_41892602_41892850_41893273_41893304_41894206_41894307_41894450_41894548_41894625_41894662_41895348_41895487_41896376_41896483_41898441_41898588_41901886_41902034_41902273_41902357_41902532_41902659_41902783_41902899_41903306_41903408_41903706_41903785_41904034_41904111_41904215_41904384_41904948_41905037_41905174_41905262_41905759_41905828_41905938_41906026_41906456_41906621_41906702_41906804_41907104
transcript_107518.known	chr19	+	2986	27	FSM	ENSG00000076928.18	ENST00000378152.8	2986	27	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_25	72.8961022001611	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGATGGCGGG	41884342	False	NA	24	True	AATATA	-18	NA	41884369	41907454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41884494_41888063_41888107_41888191_41888279_41888751_41888866_41892330_41892374_41892602_41892850_41893273_41893304_41894206_41894307_41894450_41894548_41894625_41894662_41895348_41895487_41896376_41896483_41898441_41898588_41901886_41902034_41902273_41902357_41902532_41902659_41902783_41902899_41903306_41903408_41903706_41903785_41904034_41904111_41904215_41904384_41904948_41905037_41905174_41905262_41905759_41905828_41905938_41906026_41906702_41906804_41907104
transcript_107533.known	chr19	+	2272	4	FSM	ENSG00000076928.18	ENST00000600387.5	2272	4	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	54.4691553898983	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCAGGCCTGGTGGTAG	41883156	False	NA	NA	False	NA	NA	NA	41883172	41890776	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_41883290_41888063_41888107_41888191_41888279_41888751
transcript_107537.known	chr19	-	3551	23	FSM	ENSG00000105409.19	ENST00000648268.1	3551	23	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_17	17.0452121194882	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTGTGTGTGTTGTGCCT	-41990623	True	NA	-4	True	AATATA	-18	NA	41994230	41966581	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_41966966_41967248_41967341_41967661_41967764_41968784_41968916_41969434_41969581_41970184_41970309_41970387_41970543_41975628_41975798_41976415_41976567_41977935_41978073_41978150_41978327_41978605_41978799_41981501_41981637_41981721_41981832_41981907_41982107_41984917_41985187_41985305_41985424_41985863_41985999_41986115_41986230_41987935_41988140_41988317_41988378_41988475_41988563_41994070
transcript_107538.known	chr19	-	3818	22	FSM	ENSG00000105409.19	ENST00000441343.5	3818	22	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_16	17.4207632782631	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTGTGTGTGTTGTGCCT	-41990607	True	NA	-4	True	AATATA	-18	NA	41994214	41966581	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_41967341_41967661_41967764_41968784_41968916_41969434_41969581_41970184_41970309_41970387_41970543_41975628_41975798_41976415_41976567_41977935_41978073_41978150_41978327_41978605_41978799_41981501_41981637_41981721_41981832_41981907_41982107_41984917_41985187_41985305_41985424_41985863_41985999_41986115_41986230_41987935_41988140_41988317_41988378_41988475_41988563_41994070
transcript_107541.known	chr19	-	653	5	FSM	ENSG00000105404.11	ENST00000600292.5	653	5	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	682.05255479325	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCCAGCATCTTCTGTG	-41949186	True	NA	-7	True	AATAAA	-28	NA	41959266	41956680	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_41956891_41957017_41957120_41958285_41958384_41958735_41958949_41959236
transcript_107542.known	chr19	-	750	5	FSM	ENSG00000105404.11	ENST00000222008.11	750	5	0	0	0	0	multi-exon	FALSE	canonical	3	1455	junction_2	155.803361645377	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCCCCCAGCATCTTCTG	-41949241	True	NA	-9	True	AATAAA	-26	NA	41959321	41956682	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_41956935_41957017_41957120_41958285_41958384_41958735_41958949_41959236
transcript_107544.known	chr19	-	628	4	FSM	ENSG00000105404.11	ENST00000601891.5	628	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	813.533991641133	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCCAGCATCTTCTGTG	-41949219	True	NA	-7	True	AATAAA	-28	NA	41959299	41956680	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_41956935_41958285_41958384_41958735_41958949_41959236
transcript_107547.known	chr19	-	771	3	FSM	ENSG00000105404.11	ENST00000601476.1	771	3	0	0	0	0	multi-exon	FALSE	canonical	3	1676	junction_2	74	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGGAAGCCGAGGAGTAT	-41949189	True	NA	NA	False	NA	NA	NA	41959269	41957858	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_41958384_41958735_41958949_41959236
transcript_107548.known	chr19	-	3308	20	FSM	ENSG00000105737.10	ENST00000593562.6	4506	20	708	490	708	429	multi-exon	FALSE	canonical	3	43	junction_8	11.0368308109271	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAGCAGTCTCCGCTCC	-42068192	False	2529	NA	False	GGGGCT	-44	NA	42069498	41998813	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_41999300_42003331_42003454_42003554_42003684_42005722_42005949_42006644_42006811_42021300_42021475_42021946_42022057_42022240_42022355_42042551_42042756_42053601_42053710_42053824_42053930_42054319_42054473_42056661_42056824_42056924_42056979_42059348_42059528_42062487_42062654_42062757_42062856_42065222_42065388_42065691_42065821_42069240
transcript_107550.nnic	chr19	-	3233	16	NNC	ENSG00000105737.10	novel	2101	15	NA	NA	-30	462	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	15.4266724286938	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGAGCAGCCCTGAGGGC	-42067707	True	NA	-32	True	AATAAA	-30	NA	42070236	42020868	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_42021185_42021300_42021475_42021946_42022057_42022240_42022355_42042551_42042756_42053601_42053710_42053824_42053930_42054319_42054473_42056661_42056824_42056924_42056979_42059348_42059528_42062487_42062654_42062757_42062856_42065222_42065388_42065691_42065821_42069240
transcript_107552.nnic	chr19	+	3062	3	NNC	ENSG00000105732.13	novel	3087	2	NA	NA	-59	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	217.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTGTGTAGAGTGGAATT	42069497	True	NA	17	True	AATAAA	-14	NA	42076106	42081549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_42076287_42078586_42081411_42081491
transcript_107553.known	chr19	+	3087	2	FSM	ENSG00000105732.13	ENST00000359044.5	3087	2	0	0	0	0	multi-exon	FALSE	canonical	3	435	junction_1	0	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTAGAGTGGAATTTGG	42069556	True	NA	20	True	AATAAA	-17	NA	42076165	42081552	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_42076287_42078586
transcript_107556.known	chr19	-	3730	15	FSM	ENSG00000028277.22	ENST00000342301.8	3730	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	6.03391773769796	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGGGTGGTTTGATTCC	-42132353	True	NA	NA	False	AAAAAG	-43	NA	42132476	42089352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_42091592_42091866_42091941_42092068_42092271_42093828_42093896_42095285_42095463_42095544_42095694_42095787_42095930_42096081_42096196_42099526_42099619_42099715_42099822_42117249_42117367_42122125_42122183_42122343_42122379_42122510_42122577_42132383
transcript_107559.known	chr19	-	1716	13	FSM	ENSG00000028277.22	ENST00000529952.5	1716	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	5.3437398472938	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGAGCCCTGCCATTGCTG	-42132350	True	NA	NA	False	NA	NA	NA	42132473	42091814	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_42092271_42093828_42093896_42095285_42095463_42095544_42095694_42095787_42095930_42096081_42096244_42099526_42099619_42099715_42099822_42117249_42117367_42122125_42122183_42122343_42122379_42122510_42122577_42132383
transcript_107560.known	chr19	-	1897	12	FSM	ENSG00000105723.13	ENST00000453535.1	1897	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	114.456025696255	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCTCCGTTCAATAAATTA	-42238616	True	NA	-37	True	NA	NA	NA	42242625	42230221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_42230392_42230678_42230868_42232056_42232150_42232495_42232683_42233109_42233206_42233285_42233384_42234352_42234460_42234547_42234679_42236605_42236717_42236857_42236942_42239954_42240143_42242182
transcript_107562.known	chr19	-	2193	11	FSM	ENSG00000105723.13	ENST00000222330.8	2193	11	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_1	31.8133619726052	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTTTCTGTCCGGCTGC	-42238593	True	NA	-5	True	AATAAA	-16	NA	42242602	42230189	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_42230868_42232056_42232150_42232495_42232683_42233109_42233206_42233285_42233384_42234352_42234460_42234547_42234679_42236605_42236717_42236857_42236942_42239954_42240143_42242182
transcript_107565.nnic	chr19	-	2040	5	NNC	ENSG00000160570.14	novel	1905	5	NA	NA	195	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	96.6397951156769	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCCTCTCTAGGACTCTT	-42217287	False	NA	-8	True	ATTAAA	-28	NA	42217474	42198597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_42199830_42209699_42209841_42215132_42215253_42216679_42217046_42217293
transcript_107568.known	chr19	-	1894	5	FSM	ENSG00000160570.14	ENST00000595337.5	1894	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	96.6397951156769	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCATAGGTGGGCATCGGC	-42219936	True	NA	-23	True	ATTAAA	-13	NA	42220123	42198612	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_42199830_42209699_42209841_42215132_42215253_42216679_42217046_42220073
transcript_107575.known	chr19	-	2672	4	FSM	ENSG00000105722.10	ENST00000222329.9	2672	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	1.88561808316413	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTGATCAATGTCCTAG	-42250832	True	NA	-18	True	AATAAA	-17	NA	42255128	42247568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_42249739_42249826_42249943_42250330_42250566_42254977
transcript_107577.known	chr19	-	550	4	FSM	ENSG00000160570.14	ENST00000600559.5	550	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	92.0301882838211	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCCCTGCGGGGCGTGTT	-42214896	True	NA	NA	False	NA	NA	NA	42217708	42199602	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_42199830_42209699_42209841_42215147_42215253_42217631
transcript_10758.nic	chr1	-	1655	12	ISM	ENSG00000122417.15	ENST00000294678.6	4267	18	-76	8693	-14	0	5prime_fragment	FALSE	canonical	3	38	junction_10	9.82407230705347	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTTTGGAATTTCAAAT	NA	False	NA	NA	False	AATAAA	-13	NA	86396356	86358786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_86358892_86360425_86360537_86371017_86371154_86372430_86372541_86376232_86376419_86382241_86382359_86382930_86383003_86383133_86383197_86384675_86384802_86385457_86385591_86386914_86387087_86396032
transcript_107581.known	chr19	-	555	4	FSM	ENSG00000105722.10	ENST00000593944.5	555	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	30.2140511829991	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGGCTGTGGTGGCCCGCCG	-42253885	False	4296	NA	False	NA	NA	NA	42253899	42249592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_42249739_42249826_42249943_42250330_42250566_42253841
transcript_107586.known	chr19	+	3982	3	FSM	ENSG00000167625.11	ENST00000301215.8	3982	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	7.5	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGGAAAA	42218358	True	NA	NA	False	NA	NA	NA	42220311	42228201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_42220388_42224214_42224306_42224386
transcript_107589.known	chr19	+	573	3	FSM	ENSG00000167625.11	ENST00000597945.1	573	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	28.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGAAGTCCTCTCACACC	42218423	True	NA	NA	False	NA	NA	NA	42220376	42224609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_42220636_42224214_42224306_42224386
transcript_10759.known	chr1	-	1422	11	FSM	ENSG00000122417.15	ENST00000488879.6	1422	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	17.4610996217306	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAACCAAAAATAAAAA	-86394926	True	NA	NA	False	AGTAAA	-41	NA	86396286	86358816	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_86358892_86360425_86360537_86371017_86371154_86372430_86372541_86376232_86376419_86382241_86382359_86382930_86383003_86383133_86383197_86384675_86384802_86386914_86387087_86396032
transcript_107596.nic	chr19	-	2795	3	NIC	ENSG00000105722.10	novel	2672	4	NA	NA	-39	-4	intron_retention	FALSE	canonical	3	75	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATGCAGTGATCAATGTC	-42250871	True	NA	-22	True	AATAAA	-13	NA	42255167	42247572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_42249943_42250330_42250566_42254977
transcript_107597.known	chr19	-	1905	5	FSM	ENSG00000160570.14	ENST00000596251.6	1905	5	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_3	41.6593326878864	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCCTCTCTAGGACTCTT	-42214865	True	NA	-8	True	ATTAAA	-28	NA	42217677	42198597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_42199830_42209699_42209841_42215132_42215253_42216679_42217046_42217631
transcript_1076.known	chr1	+	3206	20	FSM	ENSG00000197530.13	ENST00000355826.10	3206	20	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	123.186568861717	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGCCTCTGCTGTCTGCC	1614991	True	NA	11	True	TATAAA	-17	NA	1615499	1630605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1615634_1616507_1616615_1623430_1623700_1623773_1623946_1624794_1624902_1624990_1625186_1625285_1625429_1625545_1625654_1626649_1626755_1626836_1627000_1627073_1627208_1627295_1627445_1627672_1627830_1628018_1628180_1628272_1628400_1628488_1628723_1629132_1629312_1629384_1629567_1629638_1629705_1630291
transcript_107600.known	chr19	-	1098	6	FSM	ENSG00000079462.8	ENST00000538771.5	1098	6	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_5	218.972692361399	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTCCTGCTTTATGG	-42302276	False	NA	-22	True	ATTAAA	-17	NA	42302777	42297032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_42297366_42299969_42300093_42300170_42300288_42301949_42302040_42302231_42302326_42302436
transcript_107602.known	chr19	-	582	6	FSM	ENSG00000079462.8	ENST00000595530.5	582	6	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_5	364.652930880858	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCCTCGGGCCCACTTCC	-42302269	False	NA	NA	False	NA	NA	NA	42302770	42297279	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_42297366_42299969_42300093_42300170_42300288_42301949_42302040_42302231_42302326_42302698
transcript_107605.known	chr19	-	1054	5	FSM	ENSG00000079462.8	ENST00000262890.8	1054	5	0	0	0	0	multi-exon	FALSE	canonical	3	931	junction_1	45.2493093869951	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTGTTTCCTGCTTTAT	-42302123	False	798	-24	True	ATTAAA	-15	NA	42302624	42297034	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_42297366_42299969_42300093_42300170_42300288_42301949_42302040_42302231
transcript_107611.known	chr19	-	649	5	FSM	ENSG00000079462.8	ENST00000594989.5	649	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	407.096042108002	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCTGTTTCCTGCTTTA	-42301791	False	NA	-25	True	ATTAAA	-14	NA	42302292	42297035	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_42297366_42300041_42300093_42300170_42300288_42301949_42302040_42302231
transcript_107615.known	chr19	+	1523	3	FSM	ENSG00000188368.11	ENST00000341747.8	1523	3	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_2	4	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGATTTTCAGTGAGTT	42301886	True	NA	3	True	AATAAA	-16	NA	42302131	42310814	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_42302504_42309578_42310186_42310270
transcript_107617.known	chr19	-	726	3	FSM	ENSG00000079462.8	ENST00000597333.1	726	3	0	0	0	0	multi-exon	FALSE	canonical	3	1010	junction_1	11.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATATAGCCACAGTTGGC	-42301995	False	410	NA	False	NA	NA	NA	42302496	42299916	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_42300288_42301949_42302040_42302231
transcript_107619.known	chr19	+	1641	2	FSM	ENSG00000188368.11	ENST00000598490.1	1641	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTGATTTTCAGTGAGT	42302074	True	NA	2	True	AATAAA	-15	NA	42302097	42310813	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_42302504_42309578
transcript_107621.known	chr19	+	2219	15	FSM	ENSG00000167619.13	ENST00000673187.1	2219	15	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_8	5.11101251999952	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCTATAACATGGCTTC	42313049	True	NA	10	True	AATAAA	-13	NA	42313376	42325053	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_42313497_42314271_42314347_42314450_42314529_42314612_42314700_42314791_42314894_42314992_42315078_42315187_42315260_42315371_42315441_42316480_42316562_42316661_42316741_42316869_42316964_42317708_42317882_42320316_42320438_42323582_42323790_42324277
transcript_10763.known	chr1	-	1650	2	FSM	ENSG00000122417.15	ENST00000478286.2	1650	2	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCAAGTTTCGAGCTACTT	-86394963	True	NA	NA	False	AATAAA	-29	NA	86396323	86385727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_86387087_86396032
transcript_107639.known	chr19	-	533	4	FSM	ENSG00000105427.10	ENST00000222032.10	533	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	126.336411571996	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCGCCTACATCCATTTTG	-42390227	False	NA	0	True	AATAAA	-15	NA	42390297	42387018	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_42387243_42387339_42387477_42388925_42389040_42390239
transcript_107640.known	chr19	+	292	2	FSM	ENSG00000213904.10	ENST00000593491.3	306	2	14	0	14	0	multi-exon	FALSE	canonical	3	10	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCATAGCTCTCGGCTGGT	42396685	True	NA	15	True	AGTAAA	-27	NA	42397127	42408452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_42397225_42408257
transcript_107641.known	chr19	+	2383	2	FSM	ENSG00000213904.10	ENST00000594688.1	2383	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCTCTCCTCCCCTGAC	NA	False	NA	NA	False	AATAAA	-17	NA	42423754	42652019	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_42425205_42651086
transcript_107645.nic	chr19	-	3406	10	NIC	ENSG00000079435.10	novel	3768	10	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_4	2.94392028877595	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGCCTCTCTCAAATAC	NA	False	NA	-14	True	AATAAA	-13	NA	42424178	42401513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_42402076_42402606_42403032_42405384_42405562_42406160_42406389_42407173_42407469_42407605_42407792_42407975_42408122_42408231_42408323_42410306_42410843_42423418
transcript_107646.nnic	chr19	-	2881	10	NNC	ENSG00000079435.10	novel	3768	10	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	4.94662873101157	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGCCTCTCTCAAATAC	NA	False	NA	-14	True	AATAAA	-13	NA	42424158	42401513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_42402076_42402606_42403032_42405384_42405562_42406160_42406389_42407173_42407469_42407605_42407792_42407975_42408122_42408231_42408323_42410306_42410843_42423923
transcript_107649.nnic	chr19	-	2321	9	NIC	ENSG00000079435.10	novel	3768	10	NA	NA	-407	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	4.97336656601944	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGCCTCTCTCAAATAC	-42422997	True	NA	-14	True	AATAAA	-13	NA	42423629	42401513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_42402076_42402606_42403032_42405384_42405562_42406160_42406389_42407173_42407469_42407605_42407792_42407975_42408122_42408231_42408323_42423418
transcript_107652.nic	chr19	-	3178	9	NIC	ENSG00000079435.10	novel	3768	10	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_3	3.77284706819664	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGCCTCTCTCAAATAC	NA	False	NA	-14	True	AATAAA	-13	NA	42424178	42401513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_42402076_42402606_42403032_42405384_42405562_42407173_42407469_42407605_42407792_42407975_42408122_42408231_42408323_42410306_42410843_42423418
transcript_107657.known	chr19	-	3427	8	FSM	ENSG00000079385.23	ENST00000403444.7	3427	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2.6954231805876	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATCGACATGCTGCCTCA	-42528380	True	NA	NA	False	AATAAA	-13	NA	42528478	42507313	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_42509229_42510888_42510921_42512349_42512480_42518947_42519236_42521266_42521522_42521923_42522203_42527040_42527401_42528310
transcript_107658.known	chr19	-	1873	7	FSM	ENSG00000221826.10	ENST00000327495.10	1873	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.763762615825973	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGATCTGCTCTCTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	42740481	42721641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_42722091_42723941_42724026_42729122_42729378_42729777_42730057_42732783_42733063_42738723_42739090_42740320
transcript_107659.known	chr19	-	1610	5	FSM	ENSG00000124467.19	ENST00000406636.7	1610	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	0.707106781186548	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCTAGCAGAATAAAACAT	-42765649	False	NA	NA	False	NA	NA	NA	42765662	42752724	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_42753377_42754332_42754588_42754987_42755267_42758001_42758281_42765517
transcript_107660.known	chr19	-	301	2	FSM	ENSG00000231412.3	ENST00000595748.2	721	2	114	306	114	-306	multi-exon	TRUE	canonical	3	20	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGTGAAAAGGCCCTG	-43331292	False	NA	NA	False	NA	NA	NA	43331430	43329294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_43329509_43331343
transcript_107662.known	chr19	+	2195	9	FSM	ENSG00000204936.10	ENST00000618265.5	2195	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	3.56852560590505	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCGTTCTATACGCAATT	43353537	True	NA	7	True	CATAAA	-24	NA	43353685	43363172	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_43353767_43353852_43353994_43354206_43354393_43355660_43355784_43355991_43356109_43360264_43360406_43361142_43361329_43361444_43361580_43362087
transcript_107665.known	chr19	-	1642	5	FSM	ENSG00000124466.9	ENST00000244333.4	1642	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	7.15454401062709	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAAAGGAGTCACTTCCA	-43465595	False	NA	-11	True	AATAAA	-23	NA	43465608	43460786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_43461848_43463125_43463288_43463598_43463770_43464324_43464457_43465492
transcript_107666.nic	chr19	-	1287	2	ISM	ENSG00000124466.9	ENST00000594326.1	574	3	612	-1014	612	0	3prime_fragment	FALSE	canonical	3	21	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAAAGGAGTCACTTCCA	-43463072	True	NA	-11	True	AATAAA	-23	NA	43463351	43460786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_43461848_43463125
transcript_10767.known	chr1	+	1199	11	FSM	ENSG00000097033.14	ENST00000482504.1	1199	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	105.100951470479	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGTATTTATATACAATT	86704873	True	NA	-39	True	NA	NA	NA	86704894	86743268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_86704972_86715723_86715866_86719506_86719636_86722539_86722674_86724312_86724406_86728402_86728442_86730087_86730112_86734601_86734692_86735078_86735180_86742207_86742437_86743127
transcript_107671.nic	chr19	-	2889	15	NIC	ENSG00000176531.11	novel	2402	16	NA	NA	-46	0	intron_retention	FALSE	canonical	3	22	junction_14	6.01019541941789	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGCTGTGGTTTCCAGC	-43504621	True	NA	-2	True	ATTAAA	-20	NA	43504792	43475102	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_43475545_43478046_43478133_43479376_43479594_43486265_43486323_43486608_43486697_43486779_43486871_43487023_43487124_43494701_43494816_43495255_43495340_43495494_43495606_43497117_43497280_43497747_43497877_43501733_43501872_43502100_43502284_43503905
transcript_107681.known	chr19	-	2286	6	FSM	ENSG00000176531.11	ENST00000599242.1	2286	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	15.4194682139171	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCTTTTCTTGGGTCTCC	NA	False	NA	NA	False	NA	NA	NA	43504935	43496017	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_43497280_43497747_43497877_43501733_43501872_43502100_43502284_43503905_43504133_43504588
transcript_107683.nic	chr19	-	1123	7	NIC	ENSG00000105755.8	novel	920	7	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_6	37.6282990432585	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGACTTCTACCTATTTT	-43525751	True	NA	0	True	AATAAA	-17	NA	43527244	43506718	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_43506903_43507943_43508061_43508774_43508865_43511436_43511567_43526200_43526350_43526514_43526660_43526936
transcript_107684.known	chr19	-	920	7	FSM	ENSG00000105755.8	ENST00000292147.7	920	7	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_4	12.9957257930786	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGACTTCTACCTATTTT	-43525708	True	NA	0	True	AATAAA	-17	NA	43527201	43506718	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_43506903_43507943_43508061_43508774_43508865_43511436_43511567_43526200_43526350_43526514_43526660_43527096
transcript_107686.known	chr19	-	702	6	FSM	ENSG00000105755.8	ENST00000594342.5	702	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	36.9345366831642	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAATGACACTGCACCTCT	-43525712	True	NA	-73	True	NA	NA	NA	43527205	43506791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_43506903_43507943_43508061_43508774_43508865_43511436_43511567_43526514_43526660_43527096
transcript_107688.nnic	chr19	-	654	5	NIC	ENSG00000105755.8	novel	920	7	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_4	45.8911756223351	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGACTTCTACCTATTTT	-43525736	True	NA	0	True	AATAAA	-17	NA	43527229	43506718	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_43506903_43507943_43508061_43508774_43508865_43511436_43511567_43527096
transcript_10769.known	chr1	+	6456	10	FSM	ENSG00000097033.14	ENST00000616170.4	6456	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	93.7478888651188	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACATTGTGTTGCTAA	86702158	True	NA	1	True	AATAAA	-8	NA	86704569	86748176	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_86704972_86715723_86715866_86719506_86719636_86722539_86722674_86724312_86724406_86728402_86728490_86734601_86734692_86735078_86735180_86742207_86742437_86743127
transcript_107693.known	chr19	-	2052	17	FSM	ENSG00000073050.12	ENST00000262887.10	2052	17	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_15	26.8511522099146	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAGAGTCTCCCAAAACT	-43573051	True	NA	-18	True	AATAAA	-17	NA	43575527	43543310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_43543506_43543611_43543688_43544143_43544235_43545817_43545958_43546051_43546107_43546594_43546728_43546883_43546978_43551570_43551688_43552016_43552276_43552796_43552909_43552981_43553092_43553400_43553513_43553608_43553684_43554645_43554805_43560909_43561021_43574909_43575003_43575407
transcript_107695.known	chr19	-	1994	16	FSM	ENSG00000073050.12	ENST00000543982.5	1994	16	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_15	51.6919937922907	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCAAGAGTCTCCCAAAAC	-43573087	True	NA	-19	True	AATAAA	-16	NA	43575563	43543311	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_43543506_43543611_43543688_43544143_43544235_43545817_43545958_43546051_43546107_43546594_43546728_43546883_43546978_43551570_43551688_43552016_43552276_43552796_43552909_43552981_43553092_43553400_43553513_43553608_43553684_43554645_43554805_43560909_43561021_43575407
transcript_107705.nic	chr19	-	884	8	ISM	ENSG00000073050.12	ENST00000262887.10	2052	17	-51	9545	-15	135	5prime_fragment	FALSE	canonical	3	142	junction_6	13.0977486770881	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGACCCCCAGCAAACCAC	-43573102	True	NA	NA	False	AAGAAA	-2	NA	43575578	43552855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_43552909_43552981_43553092_43553400_43553513_43553608_43553684_43554645_43554805_43560909_43561021_43574909_43575003_43575407
transcript_107709.known	chr19	+	569	4	FSM	ENSG00000234465.11	ENST00000562255.5	569	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	40.077702307171	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGTCCTTGTGGTGTG	43580059	True	NA	13	True	TATAAA	-17	NA	43580543	43582098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_43580588_43581211_43581365_43581562_43581704_43581867
transcript_10771.known	chr1	+	6371	9	FSM	ENSG00000097033.14	ENST00000370558.8	6371	9	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_4	31.5453542538359	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTGCTAAATCTCGTA	86702164	True	NA	9	True	AATAAA	-16	NA	86704575	86748184	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_86704972_86715723_86715866_86719506_86719636_86722539_86722674_86724312_86724406_86734601_86734692_86735078_86735180_86742207_86742437_86743127
transcript_107710.known	chr19	+	557	4	FSM	ENSG00000234465.11	ENST00000569031.6	557	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	38.19249489974	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGTCCTTGTGGTGTG	43580153	True	NA	13	True	TATAAA	-17	NA	43580637	43582098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_43580670_43581211_43581365_43581562_43581704_43581867
transcript_107711.known	chr19	-	9686	3	FSM	ENSG00000167378.10	ENST00000422989.6	9686	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTCATGGTGGTCATTTG	-43594983	True	NA	-5	True	AATAAA	-20	NA	43596134	43584366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_43593368_43594808_43595341_43595981
transcript_107712.known	chr19	-	3752	1	ISM	ENSG00000167378.10	ENST00000422989.6	9686	3	6447	1569	3320	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCGTGTCTGTTCTTTTGG	-43589676	False	NA	NA	False	AATAAA	-18	NA	43589687	43585935	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_43585900_43589700
transcript_107713.known	chr19	+	706	3	FSM	ENSG00000234465.11	ENST00000562365.2	706	3	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTGTGGTGTGATGTAT	43581026	False	NA	19	True	TATAAA	-23	NA	43581036	43582104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_43581365_43581562_43581704_43581867
transcript_107714.known	chr19	-	827	4	FSM	ENSG00000131116.12	ENST00000598676.1	827	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	52.3832034148352	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGTGTAGGCAGAGCCC	-43617599	True	NA	NA	False	NA	NA	NA	43619599	43607627	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_43608108_43608504_43608604_43614228_43614435_43619557
transcript_107715.known	chr19	+	867	3	FSM	ENSG00000124444.16	ENST00000533118.5	867	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	69	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATGGGAAGGGAGTG	43596467	False	NA	93	True	NA	NA	NA	43596479	43599494	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_43596586_43597096_43597194_43598830
transcript_107717.known	chr19	+	1468	3	FSM	ENSG00000124444.16	ENST00000391965.6	1468	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	66.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGCTTTTGAGTGGGA	NA	False	NA	10	True	ATTAAA	-16	NA	43596391	43600004	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_43596586_43597093_43597194_43598830
transcript_107720.known	chr19	+	830	3	FSM	ENSG00000124444.16	ENST00000529930.1	830	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	61	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGAGCTTCAGTCTTTGG	43594788	True	NA	13	True	AATAAA	-21	NA	43596594	43599414	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_43596744_43597096_43597194_43598830
transcript_107723.known	chr19	+	859	3	FSM	ENSG00000124444.16	ENST00000528387.5	859	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	68.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTGTGTCTCCCTTATT	43596562	False	NA	NA	False	NA	NA	NA	43596574	43599525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_43596639_43597093_43597194_43598830
transcript_107724.known	chr19	-	1162	3	FSM	ENSG00000131116.12	ENST00000300811.8	1162	3	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	16	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAATGGTGCTGGGTGAGT	-43617629	True	NA	-1	True	AATAGA	-18	NA	43619629	43607223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_43608108_43614228_43614435_43619557
transcript_107726.known	chr19	-	2189	9	FSM	ENSG00000105767.3	ENST00000222374.3	2189	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	9.82025967070118	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTTGGGGTGGCTGTGTG	-43638774	True	NA	NA	False	ATTAAA	-16	NA	43639850	43622367	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_43623440_43624113_43624243_43625077_43625251_43625910_43626002_43626123_43626289_43626783_43626919_43627165_43627319_43627643_43627791_43639726
transcript_107730.nic	chr19	-	1079	8	NIC	ENSG00000105767.3	novel	302	3	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_1	8.28078671210825	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGCTGTTGTGAAGATT	-43638797	False	NA	NA	False	AATAAA	-17	NA	43639873	43624835	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_43624904_43625077_43625251_43625910_43626002_43626123_43626289_43626783_43626919_43627165_43627319_43627643_43627791_43639726
transcript_107732.nic	chr19	-	1247	7	ISM	ENSG00000105767.3	ENST00000222374.3	2189	9	-23	2474	-23	-6	5prime_fragment	FALSE	canonical	3	28	junction_3	4.12310562561766	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATAACAAGGCTGTTGTG	-43638797	False	NA	NA	False	AATAAA	-11	NA	43639873	43624841	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_43625251_43625910_43626002_43626123_43626289_43626783_43626919_43627165_43627319_43627643_43627791_43639726
transcript_107733.known	chr19	-	1254	7	FSM	ENSG00000011422.12	ENST00000339082.7	1254	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	21.9443741208437	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGGGGCATGCCTGTG	-43670151	False	NA	NA	False	AATAAA	-16	NA	43670166	43646094	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_43646549_43652224_43652372_43655438_43655574_43656478_43656641_43665315_43665460_43667580_43667692_43670065
transcript_107738.known	chr19	-	1368	7	FSM	ENSG00000011422.12	ENST00000340093.8	1368	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_6	14.5344418537486	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCCAGGTATGCCCTTC	-43670154	False	NA	-15	True	CATAAA	-18	NA	43670169	43648578	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_43649144_43652224_43652372_43655438_43655574_43656478_43656641_43665315_43665460_43667580_43667692_43670065
transcript_107743.known	chr19	-	5491	14	FSM	ENSG00000105771.14	ENST00000270066.11	5491	14	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_7	14.7515920312223	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGCGATTGGTCTCTAT	-43753551	True	NA	NA	False	AATAAA	-29	NA	43754962	43727982	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_43731675_43732857_43733003_43733323_43733453_43733625_43733734_43734388_43734496_43737596_43737683_43738121_43738218_43740106_43740219_43744771_43744885_43747441_43747540_43747632_43747898_43747977_43748053_43750591_43750748_43754653
transcript_107746.nnic	chr19	-	2305	13	NIC	ENSG00000105771.14	novel	5491	14	NA	NA	-98	236	combination_of_known_splicesites	FALSE	canonical	2	5	junction_8	28.8283955309498	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTTCTTATGTTCCACT	-43755019	False	NA	-7	True	AATAAA	-14	NA	43755060	43731153	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_43731675_43732857_43733003_43733323_43733453_43733625_43733734_43734388_43734496_43737596_43737683_43738121_43738218_43740106_43740219_43747441_43747540_43747632_43747898_43747977_43748053_43750591_43750748_43754653
transcript_107757.known	chr19	-	1956	9	FSM	ENSG00000104783.15	ENST00000648319.1	1956	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1.93245310421754	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCCATTTCTCTCTAAAC	NA	False	NA	-3	True	AATAAA	-15	NA	43780973	43766532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_43767090_43767539_43767708_43768962_43769033_43769441_43769561_43769718_43769830_43771999_43772136_43774191_43774620_43776540_43776637_43780702
transcript_107759.known	chr19	-	504	2	FSM	ENSG00000267058.1	ENST00000591815.1	504	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCTGAAAGAGGAAAGAATT	-43900756	False	NA	NA	False	AAAAAG	-2	NA	43901511	43900917	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_43900955_43901044
transcript_107762.nnic	chr19	-	4048	11	NIC	ENSG00000124459.12	novel	3926	10	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_7	16.6264848960927	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCCACCTCCAGTGCCAA	-43934263	True	NA	-6	True	ATTAAA	-32	NA	43935292	43912630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_43915201_43918869_43918963_43919572_43919700_43922170_43922218_43924237_43924311_43924401_43924562_43925324_43925459_43931246_43931366_43932603_43932691_43934425_43934695_43934923
transcript_107768.known	chr19	-	3926	10	FSM	ENSG00000124459.12	ENST00000269973.10	3926	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_7	12.3468394516348	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCAGTGCCAAGTATTAT	-43934253	True	NA	1	True	ATTAAA	-39	NA	43935282	43912623	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_43915201_43918869_43918963_43919572_43919700_43922170_43922218_43924237_43924311_43924401_43924562_43925324_43925459_43932603_43932691_43934425_43934695_43934923
transcript_107777.nnic	chr19	+	2562	6	NNC	ENSG00000204920.11	novel	2222	6	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	13.9656722000769	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACCCTTGTGTCTGTGCTT	43983854	True	NA	18	True	ATTAAA	-15	NA	43984179	43998323	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_43984246_43988458_43988559_43991547_43991675_43991841_43991935_43996092_43998000_43998054
transcript_107778.known	chr19	+	2732	5	FSM	ENSG00000204920.11	ENST00000611002.4	2732	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	14.5666571319572	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTTGTGTCTGTGCTTCT	43983844	True	NA	20	True	ATTAAA	-17	NA	43984169	43998325	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_43984349_43988458_43988559_43991547_43991675_43991841_43991935_43996092
transcript_107781.known	chr19	+	576	5	FSM	ENSG00000204920.11	ENST00000591532.5	576	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	14.5666571319572	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAGTGTAAACAGTCCAT	43983865	True	NA	NA	False	NA	NA	NA	43984190	43996307	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_43984232_43988458_43988559_43991547_43991675_43991841_43991935_43996092
transcript_107782.known	chr19	+	559	5	FSM	ENSG00000204920.11	ENST00000586454.1	559	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	14.5666571319572	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCTATCATAAATAACTCT	43983895	True	NA	NA	False	NA	NA	NA	43984220	43996203	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_43984349_43988458_43988559_43991547_43991675_43991841_43991935_43996092
transcript_107783.known	chr19	+	4104	5	FSM	ENSG00000159882.13	ENST00000429154.7	4104	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	4.03112887414927	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGATGTAAGTTCACAATG	44002649	True	NA	NA	False	AATAAA	-18	NA	44002956	44013924	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44003108_44007010_44007094_44008789_44008917_44009083_44009171_44010268
transcript_107784.known	chr19	+	1794	1	FSM	ENSG00000159882.13	ENST00000589275.1	1794	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGTGAACTGCCATATTAT	44002651	True	NA	NA	False	AATAAA	-1	NA	44002958	44004752	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44003000_44004800
transcript_107785.known	chr19	+	2399	5	FSM	ENSG00000178386.13	ENST00000434772.8	2399	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	2.82842712474619	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTGTGTTTCTGGAAT	44051247	True	NA	NA	False	AATAAA	-27	NA	44052035	44067999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44052196_44055108_44055192_44060454_44060582_44060748_44060842_44066063
transcript_107787.known	chr19	+	4336	5	FSM	ENSG00000186026.7	ENST00000421176.4	4336	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	2.38484800354236	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAAGGTGCATCACATTT	44071871	True	NA	7	True	AATAAA	-19	NA	44072158	44089613	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44072292_44076321_44076405_44081014_44081142_44082012_44082106_44085713
transcript_107788.known	chr19	+	1614	4	FSM	ENSG00000159885.14	ENST00000391960.4	1614	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	2.16024689946929	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTATTTGTGTTGGAAAAA	44025113	True	NA	NA	False	ATTAAA	-22	NA	44025378	44033110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44025479_44027022_44027150_44027397_44027491_44031816
transcript_107789.known	chr19	+	3980	6	FSM	ENSG00000267680.6	ENST00000336976.10	3980	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	17.1697408250678	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTGCAGGCATTTT	44093819	True	NA	65	True	AATGAA	-26	NA	44094391	44109886	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44094489_44096342_44096432_44097805_44097889_44100800_44100928_44101132_44101226_44106395
transcript_10779.known	chr1	-	1542	5	FSM	ENSG00000183291.18	ENST00000331835.10	1542	5	0	0	0	0	multi-exon	FALSE	canonical	3	1294	junction_4	47.4150556258242	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCTGTGTGGTTCAAAGT	-86901827	True	NA	-5	True	ATTAAA	-21	NA	86914126	86862444	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_86863606_86868052_86868103_86880661_86880726_86903280_86903449_86914027
transcript_107794.known	chr19	+	4447	5	FSM	ENSG00000256294.8	ENST00000262894.11	4447	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	4.02336923485777	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTATGTGGGGCTAATATT	44112924	True	NA	18	True	ATTAAA	-28	NA	44113398	44134822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44113570_44115759_44115843_44118187_44118315_44118481_44118575_44130849
transcript_107799.known	chr19	-	3199	2	FSM	ENSG00000186019.12	ENST00000592946.1	3199	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTACTCTTCCTAGTGA	-44112685	True	NA	NA	False	AATAAA	-43	NA	44113145	44105462	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_44108338_44112821
transcript_1078.nic	chr1	+	3141	20	NIC	ENSG00000197530.13	novel	3252	21	NA	NA	-24	0	intron_retention	FALSE	canonical	3	29	junction_3	122.763064816346	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTTGCCTCTGCTGTCTG	1615346	False	NA	9	True	TATAAA	-15	NA	1615854	1630603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_1616101_1616507_1616615_1623388_1623483_1623773_1623946_1624794_1624902_1624990_1625186_1625285_1625429_1625545_1625654_1626649_1626755_1626836_1627000_1627073_1627208_1627295_1627445_1627672_1627830_1628018_1628180_1628272_1628400_1628488_1628723_1629132_1629312_1629384_1629567_1629638_1629705_1630291
transcript_107802.known	chr19	+	1552	1	FSM	ENSG00000267680.6	ENST00000589060.1	1552	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAATGTTTTTATTACCTA	44093817	True	NA	NA	False	AAAAAG	-3	NA	44094389	44095941	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44094400_44095900
transcript_107806.known	chr19	+	2292	6	FSM	ENSG00000263002.8	ENST00000592437.5	2292	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	13.6293800299207	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAACAGAA	44140607	True	NA	NA	False	NA	NA	NA	44141556	44158119	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44141616_44142313_44142368_44144556_44144648_44148770_44148898_44150412_44150506_44156251
transcript_107809.known	chr19	+	4607	6	FSM	ENSG00000263002.8	ENST00000426739.7	4607	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	16.7284189330612	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGATGTCAATGAATTG	44140604	True	NA	NA	False	ATTAAA	-25	NA	44141553	44160313	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44141734_44142313_44142368_44144556_44144648_44148770_44148898_44150412_44150506_44156251
transcript_10781.known	chr1	+	6759	7	FSM	ENSG00000153936.18	ENST00000370550.10	6759	7	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_6	19.3340517107914	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGAATGACTGTACTTT	86914603	True	NA	8	True	TATAAA	-3	NA	86914634	87109982	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_86915161_87072933_87073173_87084193_87084280_87092530_87092670_87097837_87097936_87103431_87103590_87104469
transcript_107812.known	chr19	+	447	7	FSM	ENSG00000167380.17	ENST00000588742.5	447	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	52.5814183486482	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGGATTTGAAGTTAGAA	44163826	True	NA	NA	False	NA	NA	NA	44165103	44175033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44165143_44165587_44165614_44165756_44165808_44170034_44170096_44172087_44172215_44172859_44172953_44174983
transcript_107813.known	chr19	+	567	7	FSM	ENSG00000167380.17	ENST00000588127.5	567	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	49.1211653861031	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCAAATTTCTGAAGATGA	44163838	True	NA	NA	False	NA	NA	NA	44165115	44175679	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44165143_44165587_44165614_44165756_44165808_44170034_44170096_44172087_44172215_44172859_44172953_44175497
transcript_107814.known	chr19	+	817	6	FSM	ENSG00000167380.17	ENST00000300823.10	817	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	45.5543631280254	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGTGTGAAATCTTAAAT	44163826	True	NA	NA	False	ATTAAA	-16	NA	44165103	44175429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44165143_44165756_44165808_44170034_44170096_44172087_44172215_44172859_44172953_44174983
transcript_107815.known	chr19	+	2563	6	FSM	ENSG00000167380.17	ENST00000337433.10	2563	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	37.1020215082683	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCGTGTCATTTGAATTC	44163822	True	NA	19	True	TATAAA	-16	NA	44165099	44177685	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44165143_44165756_44165808_44170034_44170096_44172087_44172215_44172859_44172953_44175497
transcript_107817.known	chr19	+	576	6	FSM	ENSG00000167380.17	ENST00000586914.5	576	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	43.1342091616387	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGACAGAGAATCAGAAGAA	44163823	True	NA	NA	False	NA	NA	NA	44165100	44175530	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44165143_44165587_44165808_44170034_44170096_44172087_44172215_44172859_44172953_44175497
transcript_107819.known	chr19	+	3049	6	FSM	ENSG00000131115.16	ENST00000313040.12	3049	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	5.74804314527997	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAGGACTCATGATTCTT	44211867	True	NA	15	True	AATAAA	-21	NA	44212531	44237268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44212586_44213089_44213245_44217790_44217853_44228445_44228573_44229732_44229817_44234701
transcript_107824.known	chr19	+	2943	5	FSM	ENSG00000131115.16	ENST00000589005.5	2943	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	11.2805141726785	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTAAGGACTCATGATTCT	44211910	True	NA	14	True	AATAAA	-20	NA	44212574	44237267	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44212586_44213089_44213245_44228445_44228573_44229732_44229817_44234701
transcript_107826.known	chr19	+	2757	5	FSM	ENSG00000159915.13	ENST00000683810.1	2757	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	3.76662979332984	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTCTACAATCTGAGTAA	44259709	True	NA	3	True	ATTAAA	-15	NA	44259885	44275317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44259939_44264313_44264376_44266197_44266325_44266865_44266962_44272898
transcript_107828.known	chr19	-	3190	5	FSM	ENSG00000159917.17	ENST00000291182.9	3190	5	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_1	7.61577310586391	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTTCCTTTCATTATT	-44304245	True	NA	1	True	AGTAAA	-16	NA	44305025	44286347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_44289197_44298807_44298904_44299605_44299733_44303389_44303453_44304970
transcript_107829.known	chr19	-	3162	5	FSM	ENSG00000159917.17	ENST00000650576.1	3162	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	7.61577310586391	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGAATTGTTAATACTTG	-44304245	True	NA	-15	True	AAAAAG	-12	NA	44305025	44286363	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_44289197_44298819_44298904_44299605_44299733_44303389_44303453_44304970
transcript_107830.nic	chr19	-	750	4	ISM	ENSG00000159917.17	ENST00000650576.1	3162	5	0	12035	0	-9594	5prime_fragment	FALSE	canonical	3	17	junction_3	5.73488351136175	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGAAAACATCTGTCACA	-44304245	True	NA	NA	False	NA	NA	NA	44305025	44298398	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_44298904_44299605_44299733_44303389_44303453_44304970
transcript_107832.known	chr19	-	2388	5	FSM	ENSG00000267508.6	ENST00000591679.5	2388	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	2.1650635094611	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCACACTGGTTCCATTTC	-44401332	True	NA	NA	False	NA	NA	NA	44401575	44385928	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_44388103_44392339_44392467_44394519_44394541_44397198_44397257_44401567
transcript_107833.known	chr19	-	6031	4	FSM	ENSG00000267508.6	ENST00000614994.5	6031	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	1.24721912892465	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTCCCTTATGTGTGA	-44401365	True	NA	NA	False	NA	NA	NA	44401608	44382297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_44388103_44392339_44392467_44397198_44397257_44401567
transcript_107834.known	chr19	-	4956	6	FSM	ENSG00000278318.5	ENST00000614049.5	4956	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3.97994974842648	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTTTTTTGGCTTTTTCT	-44448208	True	NA	NA	False	ATTAAA	-21	NA	44448472	44426253	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_44430543_44432221_44432367_44442562_44442622_44442813_44443025_44447512_44447601_44448308
transcript_107837.known	chr19	-	1023	6	FSM	ENSG00000167384.11	ENST00000586637.5	1023	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	20.2385770250776	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCTGTAAACAGTCATCAG	-44500495	False	NA	NA	False	CATAAA	-35	NA	44500522	44477789	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_44478147_44479282_44479410_44484360_44484436_44485035_44485158_44497283_44497378_44500274
transcript_107842.known	chr19	-	3131	5	FSM	ENSG00000167384.11	ENST00000590088.5	3131	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	14.4308696896618	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATACAAAGATTTCCTT	-44500497	False	NA	NA	False	AGTAAA	-20	NA	44500524	44475638	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_44478147_44479282_44479410_44484360_44484436_44497283_44497378_44500197
transcript_107843.known	chr19	-	4248	5	FSM	ENSG00000167384.11	ENST00000592529.6	4248	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	19.536824204563	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATAAGCCATGAACATTC	-44500495	False	NA	NA	False	AATAAA	-15	NA	44500522	44474442	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_44478147_44479282_44479410_44484360_44484436_44497283_44497378_44500274
transcript_107848.known	chr19	-	4335	5	FSM	ENSG00000167384.11	ENST00000221327.8	4335	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	19.1702895126808	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTCATATTCAGTGAC	-44500495	False	NA	NA	False	AATAAA	-30	NA	44500522	44474427	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_44478147_44479282_44479410_44484360_44484436_44497283_44497373_44500197
transcript_107850.known	chr19	-	3049	4	FSM	ENSG00000167384.11	ENST00000391956.8	3049	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	24.7790233867277	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACAAAGATTTCCTTCT	-44500493	False	NA	NA	False	AGTAAA	-22	NA	44500520	44475636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_44478147_44479282_44479410_44497283_44497373_44500197
transcript_107852.known	chr19	+	3078	8	FSM	ENSG00000073008.15	ENST00000403059.8	3078	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	20.7551321413303	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCTGTGTGCAATGGGGT	44642698	True	NA	13	True	ATTAAA	-21	NA	44643909	44663583	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44644176_44647222_44647571_44649808_44650106_44653899_44654018_44657761_44657911_44658741_44658766_44661291_44661324_44661739
transcript_107853.known	chr19	+	5792	8	FSM	ENSG00000073008.15	ENST00000425690.8	5792	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_6	11.4071227301012	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATCGAAGTGATTGTTTG	44642698	True	NA	NA	False	AATAAA	-29	NA	44643909	44666162	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44644176_44647222_44647571_44649808_44650106_44653899_44654018_44657761_44657911_44658741_44658901_44661291_44661324_44661739
transcript_107855.known	chr19	+	3166	7	FSM	ENSG00000073008.15	ENST00000344956.8	3166	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	21.3183541161653	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCTGTGTGCAATGGGGT	NA	False	NA	13	True	ATTAAA	-21	NA	44643797	44663583	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44644176_44647222_44647571_44649808_44650106_44653899_44654018_44657761_44657911_44661291_44661324_44661739
transcript_107856.known	chr19	+	1344	6	FSM	ENSG00000073008.15	ENST00000406449.8	1344	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	5.53534100123922	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGCGTATAGGGTCTTA	44644084	False	NA	NA	False	NA	NA	NA	44644096	44659094	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44644176_44647222_44647571_44649808_44650106_44653899_44654018_44657761_44657911_44658741
transcript_107858.nnic	chr19	-	656	3	NNC	ENSG00000266903.2	novel	752	2	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCAGTCTCAGGTATGTC	-44718609	False	24	NA	False	ATTAAA	-19	NA	44718797	44715558	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_44715737_44715949_44716084_44718453
transcript_107859.known	chr19	-	752	2	FSM	ENSG00000266903.2	ENST00000591312.1	752	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTACCCAGTCTCAGGT	-44717511	True	NA	NA	False	ATTAAA	-14	NA	44718685	44715563	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_44716084_44718453
transcript_107860.known	chr19	+	3132	8	FSM	ENSG00000073008.15	ENST00000187830.2	3132	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	21.015057769638	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCTGTGTGCAATGGGGT	44642702	True	NA	13	True	ATTAAA	-21	NA	44643913	44663583	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44644176_44647299_44647571_44649808_44650106_44653899_44654018_44657761_44657911_44658741_44658901_44661291_44661324_44661739
transcript_107861.known	chr19	+	1877	9	FSM	ENSG00000069399.15	ENST00000164227.10	1877	9	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_1	11.9869720947369	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTGGGTGCATGGGCCT	44748676	True	NA	23	True	AATAAA	-17	NA	44748707	44760044	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44749047_44751226_44751381_44756231_44756341_44757016_44757222_44757326_44757416_44757645_44757724_44758245_44758414_44758723_44758842_44759427
transcript_107862.known	chr19	+	819	4	FSM	ENSG00000069399.15	ENST00000474300.1	819	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	12.7104506432917	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTCTCAGGCACCAGTC	44757446	False	NA	NA	False	NA	NA	NA	44757588	44759825	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44757724_44758245_44758414_44758723_44758842_44759427
transcript_107867.known	chr19	+	1576	11	FSM	ENSG00000142273.13	ENST00000647358.2	1576	11	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_4	15.7673713725529	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGCAGTGGCCAGCAGGG	44776122	True	NA	28	True	AATAAA	-38	NA	44777889	44800652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44778285_44780904_44781052_44781206_44781364_44782369_44782492_44784263_44784402_44790003_44790092_44792382_44792515_44793473_44793621_44794203_44794282_44800380_44800451_44800550
transcript_107868.known	chr19	+	1441	10	FSM	ENSG00000142273.13	ENST00000341505.4	1441	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	33.7401105767067	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCAGGGTGCAAAGGAAGA	44776101	True	NA	10	True	AATAAA	-20	NA	44777868	44800634	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44778285_44780904_44781052_44781206_44781364_44782369_44782492_44790003_44790092_44792382_44792515_44793473_44793621_44794203_44794282_44800380_44800451_44800550
transcript_107878.known	chr19	+	2409	15	FSM	ENSG00000187244.12	ENST00000270233.12	2409	15	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_13	11.672398980466	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTGGCCAGAGCTTCCT	44803358	True	NA	24	True	AATAAA	-24	NA	44809102	44821421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44809207_44811224_44811347_44812162_44812392_44812477_44812549_44813249_44813347_44813437_44813621_44814151_44814289_44814603_44814761_44818521_44818638_44818740_44818883_44819055_44819193_44819345_44819491_44819581_44819727_44820704_44820823_44820915
transcript_107882.nic	chr19	+	2608	14	NIC	ENSG00000187244.12	novel	2409	15	NA	NA	1	0	intron_retention	FALSE	canonical	3	83	junction_12	10.223537062053	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCATCCTGTGGCCAGAGC	44803327	True	NA	19	True	AATAAA	-19	NA	44809071	44821416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_44809207_44811224_44811347_44812162_44812392_44812477_44812549_44813249_44813347_44813437_44813621_44814151_44814289_44814603_44814761_44818521_44818638_44818740_44819193_44819345_44819491_44819581_44819727_44820704_44820823_44820915
transcript_107895.known	chr19	+	1709	10	FSM	ENSG00000130204.13	ENST00000405636.6	1709	10	0	0	0	0	multi-exon	FALSE	canonical	3	1390	junction_1	452.213595331309	2649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGAGGCCTCCGTTTTCT	44869442	True	NA	21	True	AATATA	-17	NA	44891219	44903688	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44891315_44891406_44891690_44892392_44892461_44892836_44892930_44893779_44893882_44893960_44894067_44900729_44900853_44901027_44901105_44901207_44901311_44903029
transcript_107901.known	chr19	+	2690	9	FSM	ENSG00000130202.10	ENST00000252483.10	2690	9	0	0	0	0	multi-exon	FALSE	canonical	3	1067	junction_6	425.975057955275	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGTCTTGCCTTTTCTGT	44827610	True	NA	16	True	NA	NA	NA	44846296	44889223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44846614_44865270_44865661_44871852_44872150_44873915_44874034_44874329_44874479_44882210_44882365_44885936_44886001_44886132_44886220_44888109
transcript_107903.known	chr19	+	3415	9	FSM	ENSG00000130204.13	ENST00000592434.5	3415	9	0	0	0	0	multi-exon	FALSE	canonical	3	1390	junction_1	476.826947120231	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGGGAGGCCTCCGTTTT	44869453	True	NA	19	True	AATATA	-15	NA	44891230	44903686	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44891315_44891406_44891690_44892392_44892461_44892836_44892930_44893779_44893882_44893960_44894067_44900729_44900853_44901027_44901105_44901207
transcript_10791.known	chr1	+	1585	5	FSM	ENSG00000153936.18	ENST00000370551.8	1585	5	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	10.9658560997307	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGAGTTTTCAGTTTT	86914616	False	NA	14	True	AATAAA	-33	NA	86914647	87098445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_86915161_87072933_87073173_87084193_87084280_87092530_87092670_87097837
transcript_107916.known	chr19	+	2112	6	FSM	ENSG00000130202.10	ENST00000252485.8	2112	6	0	0	0	0	multi-exon	FALSE	canonical	3	857	junction_5	457.783529629453	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTGTCTTGTAATACATC	44846145	False	NA	21	True	AATAAA	-21	NA	44846174	44878941	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44846614_44865270_44865661_44871852_44872150_44873915_44874034_44874329_44874479_44878222
transcript_10792.known	chr1	+	556	3	FSM	ENSG00000267272.5	ENST00000476432.5	556	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	4	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATCCTTTGAGGGCAAGC	87131891	True	NA	NA	False	NA	NA	NA	87131968	87134131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_87132253_87133613_87133719_87133964
transcript_107920.known	chr19	+	1768	9	FSM	ENSG00000130204.13	ENST00000426677.7	1768	9	0	0	0	0	multi-exon	FALSE	canonical	3	2683	junction_5	66.8869148264442	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGAGGCCTCCGTTTTCTC	44869476	True	NA	22	True	AATATA	-18	NA	44891253	44903689	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44891690_44892392_44892461_44892836_44892930_44893779_44893882_44893960_44894067_44900729_44900853_44901027_44901105_44901207_44901311_44903029
transcript_107924.known	chr19	+	689	5	FSM	ENSG00000130208.10	ENST00000588750.5	689	5	0	0	0	0	multi-exon	FALSE	canonical	2	27	junction_1	329.56894195297	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTCTCTCCTGAGTGCT	44914234	False	NA	16	True	AATAAA	-11	NA	44914246	44919342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44914490_44914671_44914734_44914871_44914950_44916189_44916326_44919172
transcript_107928.known	chr19	+	1166	4	FSM	ENSG00000130203.10	ENST00000252486.9	1166	4	0	0	0	0	multi-exon	FALSE	canonical	3	5039	junction_1	243.582976964045	12232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTGGCCTCCCCCTGTG	44840966	True	NA	37	True	AATAAA	-21	NA	44905795	44909393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44905842_44906601_44906668_44907759_44907953_44908532
transcript_107931.known	chr19	+	864	4	FSM	ENSG00000130203.10	ENST00000434152.5	864	4	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	2547.39505290317	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCGACCGCCTGGACGAGGT	44840982	True	NA	NA	False	NA	NA	NA	44905811	44909025	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44905924_44906601_44906668_44907759_44907953_44908532
transcript_107937.known	chr19	+	514	4	FSM	ENSG00000130208.10	ENST00000592535.6	514	4	0	0	0	0	multi-exon	FALSE	canonical	3	653	junction_1	88.3037686373326	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTCCTGAGTGCTTCTT	44913925	False	NA	20	True	AATAAA	-15	NA	44914607	44919346	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44914734_44914871_44914950_44916189_44916326_44919172
transcript_107938.known	chr19	+	273	3	FSM	ENSG00000130208.10	ENST00000589781.1	273	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	307	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTCTCCTGAGTGCTT	44908863	False	NA	17	True	AATAAA	-12	NA	44914709	44919343	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44914734_44914871_44914950_44919172
transcript_107939.known	chr19	+	562	4	FSM	ENSG00000130208.10	ENST00000592885.5	562	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	340.149313619116	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTCTCCTGAGTGCTTC	44908856	True	NA	18	True	AATAAA	-13	NA	44914702	44919344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44914734_44914871_44914950_44916189_44916471_44919172
transcript_10794.known	chr1	+	4993	5	FSM	ENSG00000143013.13	ENST00000370544.10	4993	5	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	24.9837447153144	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTCTGTTATAAGTTCT	87327897	True	NA	9	True	AATAAA	-19	NA	87328879	87348923	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_87329245_87332012_87332252_87339535_87339633_87340046_87340203_87344787
transcript_107946.known	chr19	+	2732	14	FSM	ENSG00000104853.16	ENST00000541297.6	2732	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	209.380602459709	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTGGGGCCGGGCCCCCCT	NA	False	NA	NA	False	NA	NA	NA	44954590	44993196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44955086_44961962_44962076_44973086_44973211_44974438_44974598_44977342_44977461_44985217_44985304_44986454_44986576_44987178_44987424_44988079_44988174_44990394_44990586_44990849_44990946_44991237_44991374_44992232_44992401_44992610
transcript_107951.known	chr19	+	2470	14	FSM	ENSG00000104853.16	ENST00000337392.10	2470	14	0	0	0	0	multi-exon	FALSE	canonical	3	654	junction_13	59.3106354652346	1100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGCCCCTCCTCCTCGT	44942510	True	NA	34	True	AATAAA	-28	NA	44955379	44993341	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_44955468_44961962_44962076_44973086_44973211_44974438_44974598_44977342_44977461_44985217_44985304_44986454_44986576_44987178_44987424_44988079_44988174_44990394_44990586_44990849_44990946_44991237_44991374_44992232_44992401_44992610
transcript_107976.known	chr19	+	2258	12	FSM	ENSG00000104856.14	ENST00000221452.13	2258	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	16.2597713787512	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGGGTTTCGTCTGTTCT	45000943	True	NA	14	True	AATAAA	-17	NA	45001463	45038192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45001686_45002948_45002997_45009813_45009823_45011935_45012277_45022052_45022211_45025328_45025421_45025605_45025738_45028887_45028993_45032533_45032750_45034243_45034313_45034450_45034529_45037404
transcript_107978.nic	chr19	+	2435	11	NIC	ENSG00000104856.14	novel	2258	12	NA	NA	-24	0	intron_retention	TRUE	canonical	0	0	junction_2	16.1768352900065	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGGGTTTCGTCTGTTCT	45000904	True	NA	14	True	AATAAA	-17	NA	45001424	45038192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_45001686_45002948_45002997_45009813_45009823_45011935_45012277_45022052_45022211_45025328_45025421_45025605_45025738_45028887_45028993_45032533_45032750_45034243_45034529_45037404
transcript_10798.known	chr1	+	1260	5	FSM	ENSG00000143013.13	ENST00000370542.1	1260	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	88.6746158717364	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAAATTTGGAAAAAA	87331277	True	NA	NA	False	AAAAAG	-11	NA	87331667	87345408	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_87331815_87332012_87332252_87339535_87339633_87340046_87340203_87344787
transcript_107981.known	chr19	+	2219	11	FSM	ENSG00000104856.14	ENST00000505236.1	2219	11	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	5.67802782663136	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTCTTCCCAATAAAGAT	45000940	True	NA	-19	True	NA	NA	NA	45001460	45038159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45001686_45002948_45002997_45011935_45012277_45022052_45022211_45025328_45025421_45025605_45025738_45028887_45028993_45032533_45032750_45034243_45034313_45034450_45034529_45037404
transcript_107985.known	chr19	+	2279	12	FSM	ENSG00000104856.14	ENST00000625761.2	2279	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	16.2597713787512	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCGTCTGTTCTGGGCTT	45000928	True	NA	20	True	AATAAA	-23	NA	45001448	45038198	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45001686_45002948_45002995_45009811_45009823_45011935_45012277_45022052_45022211_45025328_45025421_45025605_45025738_45028887_45028993_45032533_45032750_45034243_45034313_45034450_45034529_45037404
transcript_107989.known	chr19	+	2229	21	FSM	ENSG00000104859.15	ENST00000221455.8	2229	21	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_12	29.7157786369464	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCTCAGTGTCATCTGT	45032374	True	NA	43	True	AATAAA	-26	NA	45039044	45070956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45039109_45040183_45040312_45052070_45052169_45052790_45052893_45053097_45053178_45056449_45056535_45057749_45057899_45059267_45059365_45060388_45060468_45060553_45060628_45062153_45062196_45064011_45064228_45064342_45064631_45067336_45067595_45068014_45068055_45068419_45068481_45069065_45069125_45069201_45069249_45070021_45070105_45070536_45070562_45070802
transcript_107997.known	chr19	+	2213	21	FSM	ENSG00000104859.15	ENST00000391952.7	2213	21	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_15	37.6925390495254	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCTCAGTGTCATCTGT	45032394	True	NA	43	True	AATAAA	-26	NA	45039064	45070956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45039109_45040183_45040312_45052070_45052169_45052790_45052893_45053097_45053178_45056449_45056535_45057749_45057899_45059267_45059365_45060388_45060468_45060553_45060628_45062153_45062196_45064011_45064228_45064342_45064631_45067336_45067595_45068014_45068059_45068419_45068481_45069065_45069125_45069201_45069249_45070021_45070105_45070536_45070562_45070802
transcript_108.known	SIRV3	+	2467	5	FSM	SIRV3A	SIRV301	2467	5	0	0	0	0	multi-exon	FALSE	canonical	3	1379	junction_3	662.96511974613	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTAACGTCTCGTAAGAC	NA	False	NA	NA	False	NA	NA	NA	1944	8939	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV3_+_2006_4568_4780_6057_7989_8127_8208_8755
transcript_108002.known	chr19	+	1941	20	FSM	ENSG00000104859.15	ENST00000391953.8	1941	20	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	44.8697098132556	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGTGGGGAGGACAAGG	45032375	True	NA	-58	True	NA	NA	NA	45039045	45070855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45039109_45040183_45040312_45052070_45052098_45053110_45053178_45056449_45056535_45057749_45057899_45059267_45059365_45060388_45060468_45060553_45060628_45062153_45062196_45064011_45064228_45064342_45064631_45067336_45067595_45068014_45068055_45068419_45068481_45069065_45069125_45069201_45069249_45070021_45070105_45070536_45070562_45070802
transcript_108009.nic	chr19	+	2347	20	NIC	ENSG00000104859.15	novel	2229	21	NA	NA	-5	0	intron_retention	TRUE	canonical	3	111	junction_1	27.5304917834632	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGTCTCAGTGTCATCT	45032369	True	NA	41	True	AATAAA	-24	NA	45039039	45070954	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_45039109_45040183_45040312_45052070_45052169_45052790_45052893_45053097_45053178_45056449_45056535_45057749_45057899_45059267_45059365_45060388_45060468_45060553_45060628_45062153_45062196_45064011_45064631_45067336_45067595_45068014_45068055_45068419_45068481_45069065_45069125_45069201_45069249_45070021_45070105_45070536_45070562_45070802
transcript_108017.nic	chr19	+	2712	19	NIC	ENSG00000104859.15	novel	2229	21	NA	NA	-5	0	intron_retention	FALSE	canonical	3	111	junction_1	26.7810048770061	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGTCTCAGTGTCATCT	45032369	True	NA	41	True	AATAAA	-24	NA	45039039	45070954	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_45039109_45040183_45040312_45052070_45052169_45052790_45052893_45053097_45053178_45056449_45056535_45057749_45057899_45059267_45059365_45060388_45060468_45060553_45060628_45062153_45062196_45064011_45064631_45067336_45067595_45068014_45068481_45069065_45069125_45069201_45069249_45070021_45070105_45070536_45070562_45070802
transcript_108034.nic	chr19	+	2403	12	ISM	ENSG00000104859.15	ENST00000221455.8	2229	21	-5	5545	-5	1365	intron_retention	FALSE	canonical	3	111	junction_1	15.1346572884776	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGGGCGTGGTGGCAC	45032369	True	NA	NA	False	NA	NA	NA	45039039	45065411	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_45039109_45040183_45040312_45052070_45052169_45052790_45052893_45053097_45053178_45056449_45056535_45057749_45057899_45059267_45059365_45060388_45060468_45060553_45060628_45062153_45062196_45064011
transcript_108039.known	chr19	+	599	2	FSM	ENSG00000104859.15	ENST00000588247.5	599	2	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTCACGAGTTCGAGACC	45032403	True	NA	NA	False	NA	NA	NA	45039073	45040747	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45039109_45040183
transcript_10804.known	chr1	+	6070	22	FSM	ENSG00000065243.20	ENST00000370521.8	6070	22	0	0	0	0	multi-exon	FALSE	canonical	2	86	junction_12	20.060565890694	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATAGTAATCTTACTTA	88679529	True	NA	NA	False	AATAAA	-15	NA	88684272	88836255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_88684629_88740987_88741289_88760221_88760377_88770351_88770470_88771420_88771567_88771662_88771880_88784638_88784825_88786103_88786214_88804390_88804535_88804845_88804922_88805496_88805672_88805890_88806018_88807312_88807444_88807528_88807605_88807683_88807776_88813556_88813734_88821940_88822004_88824309_88824387_88828480_88828624_88832743_88832852_88833076_88833158_88833244
transcript_108049.known	chr19	+	5151	17	FSM	ENSG00000007047.16	ENST00000262891.9	5151	17	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	15.6113690543142	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCACAGGTTCTGCATACC	45250705	True	NA	NA	False	AGTAAA	-14	NA	45251270	45305284	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45251640_45258988_45259190_45263112_45263167_45263318_45263368_45264683_45264750_45264839_45264911_45266224_45266282_45271471_45271709_45277922_45278043_45278515_45278616_45280373_45280484_45280574_45280735_45287446_45287665_45294348_45294453_45297675_45297955_45299810_45299856_45302373
transcript_108055.nnic	chr19	+	3351	16	NIC	ENSG00000007047.16	novel	5151	17	NA	NA	-4	-1602	combination_of_known_splicesites	TRUE	canonical	2	2	junction_1	20.7540089835407	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTACTCCATGCCAGGC	45250701	True	NA	25	True	AATAAA	-14	NA	45251266	45303681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_45251640_45263112_45263167_45263318_45263368_45264683_45264750_45264839_45264911_45266224_45266282_45271471_45271709_45277922_45278043_45278515_45278616_45280373_45280484_45280574_45280735_45287446_45287665_45294348_45294453_45297675_45297955_45299810_45299856_45302373
transcript_108071.known	chr19	+	576	3	FSM	ENSG00000142252.11	ENST00000591747.5	576	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	138.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTAAGGCACTGTATCCCA	45073369	True	NA	36	True	CATAAA	-27	NA	45079257	45090537	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45079280_45079906_45080030_45090106
transcript_108072.known	chr19	+	1653	3	FSM	ENSG00000142252.11	ENST00000270257.9	1653	3	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	70.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGCGAAAGTGCGGCGGCC	45073371	True	NA	NA	False	AGTAAA	-22	NA	45079259	45091518	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45079378_45079906_45080030_45090106
transcript_108073.known	chr19	-	1634	3	FSM	ENSG00000170684.10	ENST00000303809.7	1634	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	0.5	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCGTCTGGACTCTGGCT	-45074698	True	NA	-8	True	AGTAAA	-17	NA	45076478	45071499	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45072581_45075712_45075863_45076075
transcript_108075.known	chr19	+	848	2	FSM	ENSG00000142252.11	ENST00000591607.1	848	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCCCAGTGCTCCCCTC	45079177	False	NA	-35	True	ATTAAA	-30	NA	45079194	45090869	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45079280_45090106
transcript_108076.known	chr19	+	716	2	FSM	ENSG00000142252.11	ENST00000391951.2	716	2	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGAATGCTCTACCTCAC	45073380	True	NA	NA	False	AGTAAA	-35	NA	45079268	45090713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45079378_45090106
transcript_108078.known	chr19	+	2946	13	FSM	ENSG00000104866.11	ENST00000221462.9	2946	13	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_9	6.14184192422943	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAACGTCTGCTTCGTGCG	45091292	True	NA	13	True	AATAAA	-21	NA	45093178	45147285	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45093528_45138513_45138612_45140235_45140282_45140505_45140607_45141321_45141442_45142060_45142212_45142302_45142459_45143520_45143634_45144853_45144996_45145093_45145261_45145352_45146050_45146389_45146481_45146570
transcript_108079.known	chr19	-	758	6	FSM	ENSG00000007255.10	ENST00000585934.1	758	6	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_5	141.481588908239	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGACTCAGAGCAGTGGGG	-45172637	True	NA	-10	True	AATAAA	-17	NA	45178237	45162932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45163224_45163915_45164010_45164163_45164248_45164852_45164971_45165126_45165195_45178134
transcript_10808.nic	chr1	+	2697	17	ISM	ENSG00000065243.20	ENST00000370521.8	6070	22	-57	14262	-6	-7174	5prime_fragment	TRUE	canonical	2	86	junction_12	21.64043885299	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTATAGGTAAGTTAAT	88679472	True	NA	NA	False	NA	NA	NA	88684215	88821993	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_88684629_88740987_88741289_88760221_88760377_88770351_88770470_88771420_88771567_88771662_88771880_88784638_88784825_88786103_88786214_88804390_88804535_88804845_88804922_88805496_88805672_88805890_88806018_88807312_88807444_88807528_88807605_88807683_88807776_88813556_88813734_88821940
transcript_108080.known	chr19	-	805	6	FSM	ENSG00000007255.10	ENST00000006275.8	805	6	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_5	116.976236903057	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGAGCAGTGGGGGAGGA	-45172637	True	NA	-5	True	AATAAA	-22	NA	45178237	45162927	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45163224_45163915_45164010_45164163_45164248_45164852_45164971_45165126_45165195_45178092
transcript_108081.known	chr19	-	695	5	FSM	ENSG00000007255.10	ENST00000588062.5	695	5	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_4	215.919545201448	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGAGCAGTGGGGGAGGA	-45172637	True	NA	-5	True	AATAAA	-22	NA	45178237	45162927	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45163224_45163915_45164010_45164163_45164248_45164852_45164971_45178134
transcript_108084.known	chr19	+	2561	2	FSM	ENSG00000189114.8	ENST00000433642.3	2561	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTATGGTTAGTTCCTTT	45178403	True	NA	15	True	ATTAAA	-16	NA	45178783	45181800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45178832_45179287
transcript_108086.known	chr19	-	3110	24	FSM	ENSG00000104884.17	ENST00000682414.1	3110	24	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	33.5866680724915	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTGTGGAGGATTTCTT	-45364966	True	NA	NA	False	GGGGCT	-30	NA	45370588	45350412	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45351031_45351467_45351722_45352208_45352353_45352505_45352650_45352745_45352817_45353082_45353156_45353241_45353335_45354729_45354852_45355664_45355729_45357269_45357372_45357473_45357544_45357629_45357700_45361523_45361643_45363742_45363912_45363985_45364120_45364234_45364332_45364423_45364548_45364837_45364955_45365041_45365159_45368629_45368744_45368929_45368993_45369069_45369148_45370132_45370233_45370535
transcript_108098.known	chr19	-	4108	23	FSM	ENSG00000104884.17	ENST00000391945.10	4108	23	0	0	0	0	multi-exon	TRUE	canonical	3	81	junction_22	19.2016269971803	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCCTGCCAGCTTCCG	-45364951	True	NA	-25	True	AATAAA	-16	NA	45370573	45349836	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45351722_45352208_45352353_45352505_45352650_45352745_45352817_45353082_45353156_45353241_45353335_45354729_45354852_45355664_45355729_45357269_45357372_45357473_45357544_45357629_45357700_45361523_45361643_45363742_45363912_45363985_45364120_45364234_45364332_45364423_45364548_45364837_45364955_45365041_45365159_45368629_45368744_45368929_45368993_45369069_45369148_45370132_45370233_45370535
transcript_1081.nic	chr1	+	3358	20	NIC	ENSG00000197530.13	novel	3252	21	NA	NA	-24	0	intron_retention	FALSE	canonical	3	41	junction_3	122.155842518874	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTTGCCTCTGCTGTCTG	1615346	False	NA	9	True	TATAAA	-15	NA	1615854	1630603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_1616101_1616507_1616615_1623388_1623700_1623773_1623946_1624794_1624902_1624990_1625186_1625285_1625429_1625545_1625654_1626649_1626755_1626836_1627000_1627073_1627208_1627295_1627445_1627672_1627830_1628018_1628180_1628272_1628400_1628488_1628723_1629132_1629312_1629384_1629567_1629638_1629705_1630291
transcript_108113.known	chr19	-	2853	22	FSM	ENSG00000104884.17	ENST00000391944.8	2853	22	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_21	18.5197082006368	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGAGTCTTGCCTGGCC	-45364966	True	NA	-6	True	CATAAA	-14	NA	45370588	45351593	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45352353_45352505_45352650_45352745_45352817_45353082_45353156_45353241_45353335_45354729_45354852_45355664_45355729_45357269_45357372_45357473_45357544_45357629_45357700_45361523_45361643_45363742_45363912_45363985_45364120_45364234_45364332_45364423_45364548_45364837_45364955_45365041_45365159_45368629_45368744_45368929_45368993_45369069_45369148_45370132_45370233_45370535
transcript_108120.known	chr19	-	4013	22	FSM	ENSG00000104884.17	ENST00000684407.1	4013	22	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_21	34.1228938117236	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCCACCTGTGCCTG	-45364966	True	NA	-35	True	AATAAA	-6	NA	45370588	45349846	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45351722_45352208_45352353_45352505_45352650_45352745_45352817_45353082_45353156_45353241_45353335_45354729_45354852_45355664_45355729_45357269_45357372_45357473_45357544_45357629_45357700_45361523_45361643_45363742_45363912_45363985_45364120_45364234_45364332_45364423_45364548_45364837_45364955_45365041_45365159_45368629_45368744_45368929_45368993_45369069_45369148_45370535
transcript_108122.known	chr19	-	3119	22	FSM	ENSG00000104884.17	ENST00000646507.1	3119	22	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_21	19.5142833902715	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCAGCACAGGGTTTGAT	-45364938	True	NA	NA	False	NA	NA	NA	45370560	45350889	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45351722_45352208_45352353_45352505_45352650_45352745_45352817_45353082_45353156_45353241_45353335_45354729_45354852_45355664_45355729_45357269_45357372_45357473_45357544_45357629_45357700_45361523_45361643_45363742_45363912_45363985_45364120_45364234_45364332_45364423_45364548_45364837_45364955_45365041_45365159_45368629_45368744_45368929_45369148_45370132_45370233_45370535
transcript_10813.known	chr1	+	2632	11	FSM	ENSG00000065243.20	ENST00000316005.11	2632	11	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_10	14.4013888219158	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATTCTCCTATCTCAG	88679478	True	NA	NA	False	NA	NA	NA	88684221	88806268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_88684629_88740987_88741289_88760221_88760377_88770351_88770470_88771420_88771567_88771662_88771880_88784638_88784825_88786103_88786214_88804390_88804535_88804845_88804922_88805496
transcript_10815.nic	chr1	+	2127	3	ISM	ENSG00000065243.20	ENST00000316005.11	2632	11	-6	44634	-6	-43260	5prime_fragment	FALSE	canonical	3	154	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATTAGGGAAGTTACCAA	88679472	True	NA	NA	False	AATATA	-41	NA	88684215	88761634	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_88684629_88740987_88741289_88760221
transcript_108176.known	chr19	+	1764	13	FSM	ENSG00000104892.17	ENST00000585434.5	1764	13	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_3	12.1275054685161	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAAATGTCACCTGACT	45340294	True	NA	11	True	ATTAAA	-17	NA	45340760	45351515	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45340847_45345533_45345800_45346543_45346775_45347449_45347517_45347940_45348161_45348645_45348734_45348819_45348922_45349428_45349603_45350340_45350432_45350513_45350552_45350640_45350748_45350953_45351018_45351285
transcript_10818.known	chr1	-	1599	7	FSM	ENSG00000137947.12	ENST00000370500.10	1599	7	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_6	12.2576506721313	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTAGTGAGCTTATTG	-88890585	True	NA	1	True	ATTAAA	-18	NA	88891567	88852632	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_88853347_88857205_88857488_88859881_88860012_88860139_88860287_88863980_88864115_88887260_88887368_88891482
transcript_108185.nic	chr19	-	2987	11	ISM	ENSG00000104884.17	ENST00000391944.8	2853	22	-4	10332	0	2060	5prime_fragment	FALSE	canonical	3	81	junction_10	21.6400092421422	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCCACTTAGGAGGTCGT	-45364970	True	NA	NA	False	AAAAAG	-14	NA	45370592	45361925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_45363912_45363985_45364120_45364234_45364332_45364423_45364548_45364837_45364955_45365041_45365159_45368629_45368744_45368929_45368993_45369069_45369148_45370132_45370233_45370535
transcript_10819.nic	chr1	-	1523	7	NIC	ENSG00000137947.12	novel	1599	7	NA	NA	30	292	combination_of_known_junctions	FALSE	canonical	3	16	junction_6	48.9069411115528	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTGTTATATGTTACAT	-88891811	True	NA	-1	True	AATAAA	-19	NA	88891914	88852931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_88853347_88857205_88857488_88859881_88860012_88860139_88860287_88863980_88864115_88887260_88887368_88891606
transcript_108191.known	chr19	-	1015	10	FSM	ENSG00000104884.17	ENST00000586131.6	1015	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	47.2944545596919	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCCCCGACCCCCCGCT	-45364919	True	NA	NA	False	NA	NA	NA	45370541	45363985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45364120_45364234_45364332_45364423_45364548_45364837_45364955_45365041_45365159_45368629_45368744_45368929_45368993_45369069_45369148_45370132_45370233_45370470
transcript_1082.nic	chr1	+	3099	20	NIC	ENSG00000197530.13	novel	3252	21	NA	NA	-24	0	intron_retention	FALSE	canonical	3	29	junction_3	122.202978143072	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTTGCCTCTGCTGTCTG	1615346	False	NA	9	True	TATAAA	-15	NA	1615854	1630603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_1616101_1616507_1616615_1623430_1623483_1623773_1623946_1624794_1624902_1624990_1625186_1625285_1625429_1625545_1625654_1626649_1626755_1626836_1627000_1627073_1627208_1627295_1627445_1627672_1627830_1628018_1628180_1628272_1628400_1628488_1628723_1629132_1629312_1629384_1629567_1629638_1629705_1630291
transcript_108201.known	chr19	-	557	7	FSM	ENSG00000104884.17	ENST00000591309.5	557	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	57.7311777888594	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGGACGCCCACCTGGCC	-45364935	True	NA	NA	False	GGGGCT	-24	NA	45370557	45364036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45364120_45364234_45364332_45368629_45368744_45368929_45368993_45369069_45369148_45370132_45370233_45370535
transcript_108203.known	chr19	-	3118	13	FSM	ENSG00000104881.16	ENST00000418234.6	3118	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	27.1779117830802	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTTCTTCTCTTTTGA	-45405530	True	NA	-5	True	AATAAA	-18	NA	45406349	45379637	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45380229_45382526_45382727_45385561_45385729_45385823_45385958_45386048_45386181_45391879_45392341_45395435_45395887_45396167_45396260_45396337_45396437_45396544_45397059_45398004_45398148_45398263_45398340_45406291
transcript_108205.known	chr19	-	2176	7	FSM	ENSG00000104881.16	ENST00000585905.1	2176	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	4.27200187265877	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-45406284	False	NA	NA	False	NA	NA	NA	45406309	45394652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45395887_45396167_45396260_45396337_45396437_45396544_45397059_45398004_45398148_45398263_45398340_45406291
transcript_108206.known	chr19	-	3131	13	FSM	ENSG00000104881.16	ENST00000360957.10	3131	13	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_6	27.0246800782791	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTTCTTCTCTTTTGA	-45404243	True	NA	-5	True	AATAAA	-18	NA	45405069	45379637	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45380229_45382526_45382727_45385561_45385729_45385823_45385958_45386048_45386181_45391879_45392341_45395435_45395887_45396167_45396260_45396337_45396437_45396544_45397059_45398004_45398148_45398263_45398340_45404998
transcript_108207.known	chr19	-	3379	10	FSM	ENSG00000012061.16	ENST00000300853.8	3379	10	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_9	74.1136931084455	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGACTCACCTCTAAT	-45421730	True	NA	-1	True	AATAAA	-19	NA	45423917	45407333	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45409726_45413676_45413746_45413962_45414035_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269_45423382_45423780
transcript_108208.known	chr19	-	1453	10	FSM	ENSG00000012061.16	ENST00000589165.5	1453	10	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_9	89.0006242175363	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGCCAAGGAAACCCCCA	-45424325	False	NA	-62	True	NA	NA	NA	45424367	45409667	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45409726_45413676_45413746_45413962_45414035_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269_45423382_45423822
transcript_108213.nic	chr19	-	3418	9	ISM	ENSG00000012061.16	ENST00000300853.8	3379	10	360	0	9	0	3prime_fragment	FALSE	canonical	3	210	junction_1	58.7684811357244	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGACTCACCTCTAAT	-45423515	False	NA	-1	True	AATAAA	-19	NA	45423557	45407333	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_45409726_45413676_45413746_45413962_45414035_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269
transcript_108215.known	chr19	-	949	9	FSM	ENSG00000012061.16	ENST00000340192.11	949	9	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	108.183799041261	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGCTGCGCTGGTGCA	-45423797	False	NA	-8	True	AATAAA	-22	NA	45423839	45409613	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45409726_45413676_45413746_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269_45423382_45423780
transcript_108217.nic	chr19	-	1136	9	ISM	ENSG00000012061.16	ENST00000589165.5	1453	10	810	-52	9	0	3prime_fragment	FALSE	canonical	3	210	junction_1	58.7684811357244	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGGCTGCGCTGGTG	-45423515	False	NA	-10	True	AATAAA	-20	NA	45423557	45409615	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_45409726_45413676_45413746_45413962_45414035_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269
transcript_108219.nic	chr19	-	989	9	NIC	ENSG00000012061.16	novel	1453	10	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_2	118.71604777788	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGGCTGCGCTGGTG	-45421736	True	NA	-10	True	AATAAA	-20	NA	45423923	45409615	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_45409726_45413676_45413746_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269_45423382_45423822
transcript_10822.known	chr1	-	1815	14	FSM	ENSG00000137944.18	ENST00000260508.9	1815	14	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_12	57.794780788498	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGTTTCATGTTTCCACC	-88985075	True	NA	-6	True	AATAAA	-17	NA	88992629	88935778	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_88936246_88943004_88943092_88943349_88943424_88949090_88949278_88953062_88953153_88955148_88955226_88961166_88961288_88961380_88961507_88962058_88962146_88964828_88964979_88968669_88968815_88969408_88969468_88988251_88988352_88992584
transcript_108222.nic	chr19	-	1234	9	ISM	ENSG00000012061.16	ENST00000300853.8	3379	10	-6	6102	-6	0	5prime_fragment	FALSE	canonical	3	138	junction_8	74.4579369510061	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGGTGTGAGCTTGCT	-45421736	True	NA	-2	True	AATAAA	-15	NA	45423923	45413435	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_45413746_45413962_45414035_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269_45423382_45423780
transcript_108224.nic	chr19	-	3346	8	ISM	ENSG00000012061.16	ENST00000340192.11	949	9	282	-2280	9	0	3prime_fragment	FALSE	canonical	3	55	junction_2	105.253241745607	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGACTCACCTCTAAT	-45423515	False	NA	-1	True	AATAAA	-19	NA	45423557	45407333	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_45409726_45413676_45413746_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269
transcript_108226.known	chr19	-	1278	8	FSM	ENSG00000012061.16	ENST00000013807.9	1278	8	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_2	52.7059614023588	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGTGTGAGCTTGCTAC	-45423524	False	NA	0	True	AATAAA	-17	NA	45423566	45413433	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45413746_45413962_45414035_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269
transcript_108231.nic	chr19	-	1399	7	NIC	ENSG00000012061.16	novel	949	9	NA	NA	-96	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	131.828697769323	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCCTGCTGGCTGCGCTG	-45424421	True	NA	-13	True	AATAAA	-17	NA	45424463	45409618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_45409726_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269_45423382_45423780
transcript_108233.known	chr19	-	836	6	FSM	ENSG00000012061.16	ENST00000591636.5	836	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	132.084821232419	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCCTGCTGGCTGCGCTG	-45423459	False	NA	-13	True	AATAAA	-17	NA	45423501	45409618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45409726_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269
transcript_10824.known	chr1	-	991	3	FSM	ENSG00000213516.10	ENST00000413769.1	991	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	26.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTCTCCTAAGAGATCTG	-88985205	True	NA	NA	False	AGTAAA	-28	NA	88992759	88983350	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_88984067_88988251_88988352_88992584
transcript_108242.known	chr19	+	1830	3	FSM	ENSG00000117877.11	ENST00000589804.1	1830	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	93	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGAGTGGGGTTTTGGTT	45402653	True	NA	13	True	ATTAAA	-21	NA	45406690	45409786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45406725_45407093_45407236_45408132
transcript_10825.known	chr1	-	4799	2	FSM	ENSG00000213516.10	ENST00000321792.5	4799	2	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTCGTAAATACTTTTC	-88985218	True	NA	-8	True	ATTAAA	-16	NA	88992772	88979455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_88984067_88992584
transcript_108250.nnic	chr19	+	742	3	NNC	ENSG00000117877.11	novel	1830	3	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_1	86	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAGCAGCTGAAAGAACC	45402589	True	NA	NA	False	AAGAAA	-4	NA	45406626	45408619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_45406740_45407093_45407236_45408132
transcript_108251.nnic	chr19	+	957	3	NNC	ENSG00000117877.11	novel	2822	3	NA	NA	-17	215	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_1	86	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAAGAGGCAAAAGGGGA	45402589	True	NA	NA	False	NA	NA	NA	45406626	45408834	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_45406740_45407093_45407236_45408132
transcript_108257.known	chr19	+	1061	2	FSM	ENSG00000117877.11	ENST00000592852.1	1061	2	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAGCAGCTGAAAGAACC	45402624	True	NA	NA	False	AAGAAA	-4	NA	45406661	45408619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45407236_45408132
transcript_108258.known	chr19	+	3775	4	FSM	ENSG00000125740.14	ENST00000353609.8	3775	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.16024689946929	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGCCAGGCTACAGTGTTT	45467806	True	NA	10	True	AATAAA	-18	NA	45467995	45475179	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45468713_45470628_45470950_45471193_45471302_45472550
transcript_108260.nnic	chr19	-	2279	11	NIC	ENSG00000125744.12	novel	2274	11	NA	NA	43	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	56.8599155820689	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGAGGCCTCTTGTGCTTC	-45496450	True	NA	-23	True	AATAAA	-16	NA	45497004	45485293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_45485790_45486054_45486114_45488470_45488518_45488636_45488707_45488847_45488987_45489345_45489554_45493159_45493379_45494117_45494421_45494525_45495006_45495094_45495140_45496791
transcript_108261.known	chr19	-	2274	11	FSM	ENSG00000125744.12	ENST00000245923.9	2274	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	54.1752711114582	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGAGGCCTCTTGTGCTTC	-45496493	True	NA	-23	True	AATAAA	-16	NA	45497047	45485293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45485790_45486054_45486114_45488470_45488518_45488636_45488707_45488847_45488987_45489345_45489554_45493159_45493379_45494165_45494421_45494525_45495006_45495094_45495140_45496791
transcript_108262.nnic	chr19	-	2779	11	NNC	ENSG00000125744.12	novel	2274	11	NA	NA	-2446	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	64.663436345434	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGAGGCCTCTTGTGCTTC	-45499375	True	NA	-23	True	AATAAA	-16	NA	45499501	45485293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_45485790_45486054_45486114_45488470_45488518_45488636_45488707_45488847_45488987_45489345_45489554_45493159_45493379_45494165_45494421_45494525_45495006_45495094_45495140_45498740
transcript_108264.known	chr19	-	2357	11	FSM	ENSG00000125744.12	ENST00000590526.5	2357	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_10	63.0831990311208	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGAGGCCTCTTGTGCTTC	-45496501	True	NA	-23	True	AATAAA	-16	NA	45497055	45485293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45485790_45486054_45486114_45488470_45488518_45488636_45488707_45488847_45488987_45489345_45489554_45493159_45493379_45494165_45494421_45494525_45495006_45495094_45495215_45496791
transcript_108268.known	chr19	-	2111	10	FSM	ENSG00000125744.12	ENST00000591286.5	2111	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	59.3928124678358	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGAGGCCTCTTGTGCTTC	-45496501	True	NA	-23	True	AATAAA	-16	NA	45497055	45485293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45485790_45486054_45486114_45488470_45488518_45488636_45488707_45488847_45488987_45489345_45489554_45494117_45494421_45494525_45495006_45495094_45495140_45496791
transcript_108269.known	chr19	-	2063	10	FSM	ENSG00000125744.12	ENST00000344680.8	2063	10	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_6	48.4424056655599	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGAGGCCTCTTGTGCTTC	-45496501	True	NA	-23	True	AATAAA	-16	NA	45497055	45485293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45485790_45486054_45486114_45488470_45488518_45488636_45488707_45488847_45488987_45489345_45489554_45494165_45494421_45494525_45495006_45495094_45495140_45496791
transcript_108270.nnic	chr19	-	2560	10	NNC	ENSG00000125744.12	novel	2063	10	NA	NA	-2446	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	61.8800113321672	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGAGGCCTCTTGTGCTTC	-45499375	True	NA	-23	True	AATAAA	-16	NA	45499501	45485293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_45485790_45486054_45486114_45488470_45488518_45488636_45488707_45488847_45488987_45489345_45489554_45494165_45494421_45494525_45495006_45495094_45495140_45498740
transcript_108272.nic	chr19	-	2147	10	NIC	ENSG00000125744.12	novel	2357	11	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_9	59.950185081933	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGAGGCCTCTTGTGCTTC	-45496510	True	NA	-23	True	AATAAA	-16	NA	45497064	45485293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_45485790_45486054_45486114_45488470_45488518_45488636_45488707_45488847_45488987_45489345_45489554_45494165_45494421_45494525_45495006_45495094_45495215_45496791
transcript_108276.known	chr19	+	872	5	FSM	ENSG00000213889.11	ENST00000396737.6	872	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	62.499499998	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAAGACATGTTTTGCCT	45497056	True	NA	NA	False	ATTAAA	-45	NA	45497250	45502510	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45497344_45499948_45500067_45500455_45500562_45500649_45500711_45502016
transcript_108278.known	chr19	+	1751	5	FSM	ENSG00000213889.11	ENST00000451287.7	1751	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	64.6548528727736	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGACATGTTTTGCCTAGT	45498248	False	NA	NA	False	AATACA	-19	NA	45498442	45502513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45499412_45499948_45500067_45500455_45500562_45500649_45500711_45502016
transcript_108279.known	chr19	+	895	5	FSM	ENSG00000213889.11	ENST00000396735.6	895	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	41.4306649717332	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAAGACATGTTTTGCCT	45499395	False	NA	NA	False	ATTAAA	-45	NA	45499609	45502510	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45499726_45499948_45500067_45500455_45500562_45500649_45500711_45502016
transcript_108285.known	chr19	+	1953	4	FSM	ENSG00000213889.11	ENST00000415077.1	1953	4	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	6.94422221866655	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAACCAAATGTTTTTGAA	45498392	True	NA	NA	False	AAAAAG	-44	NA	45498606	45502342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45500067_45500455_45500562_45500649_45500711_45502016
transcript_108292.nic	chr19	-	1449	4	ISM	ENSG00000125744.12	ENST00000245923.9	2274	11	25	8434	25	158	5prime_fragment	FALSE	canonical	3	76	junction_3	5.43650214343336	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGAGTGCTCCTCCTAG	-45496468	True	NA	NA	False	AATAAA	-25	NA	45497022	45493727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_45494421_45494525_45495006_45495094_45495140_45496791
transcript_108297.known	chr19	-	1127	7	FSM	ENSG00000125744.12	ENST00000430715.6	1127	7	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_6	24.7616414821168	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGAGGCCTCTTGTGCTTC	-45493141	False	NA	-23	True	AATAAA	-16	NA	45493267	45485293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45485790_45486054_45486114_45488470_45488518_45488636_45488707_45488847_45488987_45489345_45489554_45493159
transcript_10831.known	chr1	-	1868	13	FSM	ENSG00000137944.18	ENST00000370491.7	1868	13	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_12	20.0499376557634	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGTTTCCACCATTGTG	-88985222	True	NA	0	True	AATAAA	-23	NA	88992776	88935772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_88936246_88943004_88943092_88943349_88943424_88949090_88949278_88953062_88953153_88955148_88955226_88961166_88961288_88961380_88961507_88962058_88962146_88964828_88964979_88968669_88968815_88969408_88969468_88992584
transcript_108313.known	chr19	+	2242	13	FSM	ENSG00000125753.14	ENST00000245932.11	2242	13	0	0	0	0	multi-exon	TRUE	canonical	3	602	junction_6	78.8472503571868	3741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTAAGATCTCTGGAGTGA	45494875	True	NA	16	True	AATAAA	-19	NA	45507478	45526983	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45507777_45517662_45517835_45517928_45518095_45521321_45521407_45522167_45522218_45522339_45522582_45522717_45522819_45523643_45523696_45523840_45523878_45524096_45524143_45524569_45524661_45525945_45526004_45526139
transcript_108330.known	chr19	+	1725	11	FSM	ENSG00000125753.14	ENST00000586014.5	1725	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	237.891067507799	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGGCCCCTGCAGAAT	45494902	True	NA	-25	True	NA	NA	NA	45507505	45526942	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45507777_45517662_45517835_45517928_45517964_45522522_45522582_45522717_45522819_45523643_45523696_45523840_45523878_45524096_45524143_45524569_45524661_45525945_45526004_45526139
transcript_10835.known	chr1	+	7170	3	FSM	ENSG00000171488.15	ENST00000370454.9	7170	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	7.5	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATATTTGTCCCTCTCTT	89632810	True	NA	NA	False	AATAAA	-21	NA	89633119	89719533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_89633323_89686469_89686612_89712708
transcript_108354.known	chr19	-	2250	2	FSM	ENSG00000125741.5	ENST00000323060.3	2250	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATTAAAAAAAAAAAAAAAAA	-45583374	True	NA	NA	False	NA	NA	NA	45584842	45527426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45529457_45584622
transcript_108355.known	chr19	-	7811	2	FSM	ENSG00000125741.5	ENST00000263275.5	7811	2	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGCAGCCCGGTTTAAT	-45583334	True	NA	NA	False	ATTAAA	-14	NA	45584802	45546280	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45553912_45584622
transcript_108363.known	chr19	-	2791	22	FSM	ENSG00000125746.18	ENST00000536630.5	2791	22	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_19	26.7930677736915	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTGTCAGGGTCTATG	-45643070	True	NA	-21	True	AATAAA	-13	NA	45643727	45609401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45609789_45613540_45613672_45614604_45614701_45615801_45615890_45616460_45616559_45616764_45616854_45617629_45617698_45619059_45619192_45621206_45621333_45621482_45621638_45624718_45624819_45626704_45626840_45629950_45630047_45632860_45632972_45633069_45633140_45634321_45634472_45638504_45638635_45638844_45638874_45641640_45641749_45641917_45642042_45642133_45642353_45643578
transcript_108364.known	chr19	-	2974	22	FSM	ENSG00000125746.18	ENST00000587152.6	2974	22	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_21	29.4418216433359	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGTCAGGGTCTATGTA	NA	False	NA	-19	True	AATAAA	-15	NA	45645602	45609399	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45609789_45613540_45613672_45614604_45614701_45615801_45615890_45616460_45616559_45616764_45616854_45617629_45617698_45619059_45619192_45621206_45621333_45621482_45621638_45624718_45624819_45626704_45626840_45629950_45630047_45632860_45632972_45633069_45633140_45634321_45634472_45638504_45638635_45638844_45638874_45641640_45641749_45641917_45642042_45642133_45642353_45645272
transcript_108375.known	chr19	-	2234	19	FSM	ENSG00000125746.18	ENST00000245925.8	2234	19	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_18	24.959535153158	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGTCAGGGTCTATGTA	-45639379	False	657	-19	True	AATAAA	-15	NA	45639397	45609399	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45609789_45613540_45613672_45614604_45614701_45615801_45615890_45616460_45616559_45616764_45616854_45617629_45617698_45619059_45619192_45621206_45621333_45621482_45621638_45624718_45624819_45626704_45626840_45629950_45630047_45632860_45632972_45633069_45633140_45634321_45634472_45638504_45638635_45638844_45638874_45639356
transcript_108387.known	chr19	-	2062	17	FSM	ENSG00000125746.18	ENST00000588308.5	2062	17	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_5	34.3383895953203	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGTCAGGGTCTATGTA	-45639373	False	657	-19	True	AATAAA	-15	NA	45639391	45609399	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45609789_45613540_45613672_45614604_45614701_45615801_45615890_45616764_45616854_45619059_45619192_45621206_45621333_45621482_45621638_45624718_45624819_45626704_45626840_45629950_45630047_45632860_45632972_45633069_45633140_45634321_45634472_45638504_45638635_45638844_45638874_45639356
transcript_108395.known	chr19	-	615	4	FSM	ENSG00000125743.11	ENST00000391932.7	615	4	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_3	4277.64930254404	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGGTATCTGTTTCCAG	-45643955	True	NA	-18	True	AATAAA	-16	NA	45691941	45687462	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45687728_45688386_45688567_45689232_45689348_45691886
transcript_108397.known	chr19	-	596	4	FSM	ENSG00000125743.11	ENST00000587367.5	596	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	4349.88538801758	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGGTATCTGTTTCCAGA	-45643954	True	NA	-17	True	AATAAA	-17	NA	45691940	45687461	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45687728_45688386_45688567_45690571_45690668_45691886
transcript_108399.known	chr19	-	702	4	FSM	ENSG00000125743.11	ENST00000588301.5	702	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	4017.92143609935	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGGTATCTGTTTCCAG	-45692301	False	NA	-18	True	AATAAA	-16	NA	45692316	45687462	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45687728_45688386_45688567_45691886_45691993_45692165
transcript_1084.nic	chr1	+	3296	20	NIC	ENSG00000197530.13	novel	3252	21	NA	NA	-24	0	intron_retention	FALSE	canonical	3	11	junction_3	123.226903743031	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTTGCCTCTGCTGTCTG	1615346	False	NA	9	True	TATAAA	-15	NA	1615854	1630603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_1616101_1616507_1616615_1623430_1623680_1623773_1623946_1624794_1624902_1624990_1625186_1625285_1625429_1625545_1625654_1626649_1626755_1626836_1627000_1627073_1627208_1627295_1627445_1627672_1627830_1628018_1628180_1628272_1628400_1628488_1628723_1629132_1629312_1629384_1629567_1629638_1629705_1630291
transcript_108401.known	chr19	-	515	3	FSM	ENSG00000125743.11	ENST00000342669.8	515	3	0	0	0	0	multi-exon	FALSE	canonical	3	7559	junction_2	844	1478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTATCTGTTTCCAGAGC	-45643967	True	NA	-15	True	AATAAA	-19	NA	45691953	45687459	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45687728_45688386_45688567_45691886
transcript_108402.known	chr19	-	379	3	FSM	ENSG00000125743.11	ENST00000585392.2	379	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	4620	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTATCTGTTTCCAGAGC	-45643931	True	NA	-15	True	AATAAA	-19	NA	45691917	45687459	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45687728_45688386_45688467_45691886
transcript_108405.nnic	chr19	-	3435	3	NNC	ENSG00000177051.6	novel	2993	2	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	2.5	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGTGCAGACTGGTTT	-45727572	True	NA	-6	True	TATAAA	-15	NA	45730925	45710628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_45713574_45723472_45723886_45730848
transcript_108407.nnic	chr19	-	3006	2	NNC	ENSG00000177051.6	novel	2993	2	NA	NA	-2024	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGTGCAGACTGGTTT	-45715743	True	NA	-6	True	TATAAA	-15	NA	45717302	45710628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_45713574_45717241
transcript_108408.nnic	chr19	-	3055	2	NNC	ENSG00000177051.6	novel	2993	2	NA	NA	-2096	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGTGCAGACTGGTTT	-45715815	True	NA	-6	True	TATAAA	-15	NA	45717374	45710628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_45713574_45717264
transcript_108409.known	chr19	-	2993	2	FSM	ENSG00000177051.6	ENST00000317683.4	2993	2	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	0	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGTGCAGACTGGTTT	-45727543	True	NA	-6	True	TATAAA	-15	NA	45730896	45710628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45713574_45730848
transcript_108410.nnic	chr19	-	426	2	NNC	ENSG00000177051.6	novel	2993	2	NA	NA	-29	-10081	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAAGCCAGAGTGCCCA	-45727572	True	NA	NA	False	AATAAA	-2	NA	45730925	45723536	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_45723886_45730848
transcript_108412.known	chr19	-	2754	15	FSM	ENSG00000104936.20	ENST00000343373.10	2754	15	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_14	21.0054657610046	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCACCCCCGACCCTCGC	NA	False	NA	-56	True	NA	NA	NA	45782496	45769763	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45770641_45770970_45771057_45771349_45771397_45771567_45771666_45771770_45771929_45772640_45772753_45774948_45775035_45777326_45777591_45777666_45777874_45778126_45778221_45778492_45778642_45779263_45779360_45779438_45779523_45779777_45779870_45782192
transcript_108414.known	chr19	-	2799	15	FSM	ENSG00000104936.20	ENST00000291270.9	2799	15	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_14	20.2082272596978	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGGACTCCACAGTGTC	-45782474	True	NA	-9	True	AATAAA	-21	NA	45782490	45769716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45770641_45770970_45771061_45771349_45771397_45771567_45771666_45771770_45771929_45772640_45772753_45774948_45775035_45777326_45777591_45777666_45777874_45778126_45778221_45778492_45778642_45779263_45779360_45779438_45779523_45779777_45779870_45782192
transcript_108415.known	chr19	-	2754	15	FSM	ENSG00000104936.20	ENST00000447742.6	2754	15	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_14	22.5425900762743	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCTCCATCTGCCCAAAG	-45782463	False	NA	-28	True	AATAAA	-2	NA	45782479	45769735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45770641_45770970_45771061_45771349_45771397_45771567_45771666_45771770_45771929_45772640_45772753_45774948_45775035_45777341_45777591_45777666_45777874_45778126_45778221_45778492_45778642_45779263_45779360_45779438_45779523_45779777_45779870_45782192
transcript_108416.known	chr19	-	3357	14	FSM	ENSG00000104936.20	ENST00000674226.1	3357	14	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_7	21.0586669953561	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTCTGGACTCCACAGT	-45780731	False	NA	-12	True	AATAAA	-18	NA	45780747	45769719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45770641_45770970_45771057_45771349_45771397_45771567_45771666_45771770_45771929_45772640_45772753_45774948_45775035_45777341_45777591_45777666_45777874_45778126_45778221_45778492_45778642_45779263_45779360_45779438_45779523_45779777
transcript_108417.known	chr19	-	2499	13	FSM	ENSG00000104936.20	ENST00000596686.5	2499	13	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	18.0477761018421	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTCTGGACTCCACAGT	-45779517	True	NA	-12	True	AATAAA	-18	NA	45779619	45769719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45770641_45770970_45771057_45771349_45771397_45771567_45771666_45771770_45771929_45772640_45772753_45774948_45775035_45777326_45777591_45777666_45777874_45778126_45778221_45778492_45778642_45779263_45779360_45779438
transcript_10842.nnic	chr1	+	3091	7	NIC	ENSG00000197147.15	novel	8034	9	NA	NA	-4	-139	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	30.5218500968295	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCAGGCGTGGTGGCGT	89522794	True	NA	NA	False	NA	NA	NA	89524824	89593227	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_89525023_89549914_89549972_89568246_89568308_89568438_89568494_89579590_89579689_89582624_89584790_89592770
transcript_10843.nnic	chr1	+	3257	7	NIC	ENSG00000197147.15	novel	8034	9	NA	NA	-4	27	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	30.5218500968295	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCCAGGGCTTTAAATGA	89522794	True	NA	NA	False	NA	NA	NA	89524824	89593393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_89525023_89549914_89549972_89568246_89568308_89568438_89568494_89579590_89579689_89582624_89584790_89592770
transcript_108430.known	chr19	-	3410	5	FSM	ENSG00000185800.12	ENST00000270223.7	3410	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	48.5103081829007	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCCGAGTCGGAATCCAT	-45790759	False	NA	NA	False	TATAAA	-27	NA	45792845	45782946	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45784291_45784640_45784716_45785593_45786872_45790904_45791088_45792315
transcript_108435.nic	chr19	-	2742	4	NIC	ENSG00000177045.11	novel	3344	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_3	28.5462587546755	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGGGTCTGGGGTGCCTT	-45765115	True	NA	-5	True	AATAAA	-21	NA	45769252	45764784	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_45766112_45766349_45767156_45768041_45768113_45768714
transcript_108436.nnic	chr19	-	3018	4	NNC	ENSG00000177045.11	novel	3344	3	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	31.3723161756065	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGGGTCTGGGGTGCCTT	-45765142	True	NA	-5	True	AATAAA	-21	NA	45769279	45764784	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_45766112_45766349_45767156_45768041_45768362_45768714
transcript_108437.known	chr19	-	3292	4	FSM	ENSG00000185800.12	ENST00000377735.7	3292	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	44.8280666051477	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCCGAGTCGGAATCCAT	-45790716	True	NA	NA	False	TATAAA	-27	NA	45792802	45782946	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45784291_45785593_45786872_45790904_45791088_45792315
transcript_108438.nnic	chr19	-	2427	3	NNC	ENSG00000177045.11	novel	3344	3	NA	NA	1100	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	33	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGGGTCTGGGGTGCCTT	-45767479	False	200	-5	True	AATAAA	-21	NA	45767527	45764784	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_45766112_45766349_45767156_45767233
transcript_108439.known	chr19	-	3344	3	FSM	ENSG00000177045.11	ENST00000317578.7	3344	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	1.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGGGTCTGGGGTGCCTT	-45765115	True	NA	-5	True	AATAAA	-21	NA	45769252	45764784	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45766112_45766349_45767156_45768041
transcript_108442.nnic	chr19	+	1249	2	NNC	ENSG00000259605.3	novel	1402	2	NA	NA	-98	9	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAAACGTGGATTGGGGT	NA	False	NA	17	True	AATAAA	-29	NA	45768288	45769815	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_45768837_45769114
transcript_108443.known	chr19	-	1809	2	FSM	ENSG00000177045.11	ENST00000560160.1	1809	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCCCTGCCGCTGTGTCT	-45768579	False	NA	-18	True	NA	NA	NA	45768627	45764888	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45766112_45768041
transcript_108444.known	chr19	-	643	2	FSM	ENSG00000185800.12	ENST00000598237.1	643	2	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCCTGCCTCAGCCTCC	-45790351	False	NA	NA	False	NA	NA	NA	45792437	45790566	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45791088_45792315
transcript_108447.known	chr19	+	1420	1	FSM	ENSG00000259605.3	ENST00000592217.2	1420	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGTGCATCCAAAACGTG	45768130	True	NA	8	True	AATAAA	-20	NA	45768386	45769806	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45768400_45769800
transcript_108450.known	chr19	-	4077	27	FSM	ENSG00000125755.19	ENST00000245934.12	4077	27	0	0	0	0	multi-exon	TRUE	canonical	3	182	junction_18	24.8107928891235	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGCGCGGGTGCCGTCTC	-45848079	True	NA	32	True	AAAAAG	-13	NA	45863147	45815409	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45815698_45815850_45816184_45816481_45816578_45816797_45816975_45817958_45818147_45821383_45821486_45822755_45822847_45823371_45823473_45823766_45823876_45825170_45825332_45826225_45826374_45827509_45827624_45827836_45827919_45828969_45829206_45830053_45830205_45831383_45831589_45835077_45835229_45838460_45838616_45842249_45842490_45844029_45844201_45847751_45848002_45848749_45848877_45852311_45852386_45852481_45852536_45854174_45854241_45854390_45854508_45863057
transcript_108462.known	chr19	-	995	4	FSM	ENSG00000125755.19	ENST00000598364.1	995	4	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_3	24.3447461820136	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGATGTGAACTTGGGC	-45816842	True	NA	13	True	AAAAAG	-4	NA	45817133	45815467	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45815698_45815850_45816184_45816481_45816578_45816797
transcript_108464.known	chr19	+	538	2	FSM	ENSG00000170608.3	ENST00000594297.1	538	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGATGCTGACCTTGAGTG	45863947	False	NA	NA	False	NA	NA	NA	45863988	45872409	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45864192_45872074
transcript_108465.known	chr19	+	1923	2	FSM	ENSG00000170608.3	ENST00000302177.3	1923	2	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	0	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAATGTCTCTTTTCCTTG	45862536	True	NA	33	True	ATTAAA	-21	NA	45864325	45873797	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45864526_45872074
transcript_108466.known	chr19	-	2534	1	FSM	ENSG00000170604.5	ENST00000302165.5	2534	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	492	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGGTCCCTTAGTTGT	-45884716	True	NA	-8	True	AATAAA	-24	NA	45886141	45883607	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45883600_45886100
transcript_108467.known	chr19	-	1896	3	FSM	ENSG00000176182.6	ENST00000322217.6	1896	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	3.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTGAGGCTCTGTCTGA	-45901447	True	NA	NA	False	AATAAA	-17	NA	45902613	45890022	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_45891324_45901274_45901826_45902569
transcript_108469.known	chr19	+	1817	14	FSM	ENSG00000104983.8	ENST00000595358.5	1817	14	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	16.3652829247496	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCTCAGCTTATGACTAAA	45993527	True	NA	4	True	AATAAA	-18	NA	45995466	46018616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_45995505_46003007_46003167_46003418_46003502_46006558_46006717_46008139_46008302_46015048_46015260_46015344_46015428_46016053_46016224_46016317_46016394_46016693_46016834_46016990_46017070_46017246_46017305_46018077_46018151_46018289
transcript_10847.nnic	chr1	+	4283	6	NNC	ENSG00000197147.15	novel	7664	6	NA	NA	-751	27	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	36.4230696125409	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCCAGGGCTTTAAATGA	NA	False	NA	NA	False	NA	NA	NA	89524077	89593393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_89525359_89568246_89568308_89568438_89568494_89579590_89579689_89582624_89584790_89592770
transcript_108470.nnic	chr19	+	1863	14	NNC	ENSG00000104983.8	novel	1817	14	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	27.4622925989965	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCCTCAGCTTATGACTAA	45993505	True	NA	3	True	AATAAA	-17	NA	45995444	46018615	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_45995505_46002982_46003167_46003418_46003502_46006558_46006717_46008139_46008302_46015048_46015260_46015344_46015428_46016053_46016224_46016317_46016394_46016693_46016834_46016990_46017070_46017246_46017305_46018077_46018151_46018289
transcript_10848.nnic	chr1	+	3344	6	NNC	ENSG00000197147.15	novel	3225	7	NA	NA	-583	27	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	33.6832302488939	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCCAGGGCTTTAAATGA	89523992	True	NA	NA	False	NA	NA	NA	89524245	89593393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_89524588_89568246_89568308_89568438_89568494_89579590_89579689_89582624_89584790_89592770
transcript_108488.nic	chr19	+	2428	15	NIC	ENSG00000124440.16	novel	5856	15	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_11	33.0321426640718	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATGTGTGAGTATCCTG	46292695	True	NA	NA	False	AATAAA	-13	NA	46296998	46338538	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_46297103_46303897_46304089_46305244_46305391_46308220_46308306_46308662_46308776_46309150_46309360_46312160_46312268_46312505_46312654_46320442_46320562_46321775_46321967_46325534_46325640_46329080_46329479_46331155_46331274_46334904_46334987_46338226
transcript_10849.known	chr1	+	7664	6	FSM	ENSG00000197147.15	ENST00000330947.7	7664	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	15.1340675299141	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTGACTGTACTAATTT	89522798	True	NA	6	True	AATAAA	-18	NA	89524828	89597861	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_89525023_89568246_89568308_89568438_89568494_89579590_89579689_89582624_89584790_89592770
transcript_108490.nic	chr19	+	2302	15	NIC	ENSG00000124440.16	novel	5856	15	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_14	22.3877016165901	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATGTGTGAGTATCCTG	46292695	True	NA	NA	False	AATAAA	-13	NA	46296998	46338538	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_46297103_46303897_46304089_46305244_46305391_46308220_46308306_46308662_46308776_46309150_46309360_46312160_46312268_46312505_46312654_46320442_46320562_46321775_46321967_46325534_46325640_46329206_46329479_46331155_46331274_46334904_46334987_46338226
transcript_108491.known	chr19	+	5856	15	FSM	ENSG00000124440.16	ENST00000377670.9	5856	15	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_14	17.7851405529952	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGCGTGTTGACTCATC	46292738	True	NA	16	True	CATAAA	-25	NA	46297041	46343433	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_46297103_46303897_46304089_46305244_46305391_46308220_46308306_46308662_46308776_46309150_46309360_46312160_46312268_46312505_46312654_46320442_46320562_46321775_46321967_46325534_46325640_46329206_46329479_46331155_46331274_46334904_46334987_46339524
transcript_108497.known	chr19	+	2551	15	FSM	ENSG00000124440.16	ENST00000300862.7	2551	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	34.9545623427247	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTGCCTGGGGTCTGTA	46299295	False	NA	76	True	NA	NA	NA	46303598	46340100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_46303688_46303897_46304089_46305244_46305391_46308220_46308306_46308662_46308776_46309150_46309360_46312160_46312268_46312505_46312654_46320442_46320562_46321775_46321967_46325534_46325640_46329206_46329479_46331155_46331274_46334904_46334987_46339524
transcript_108506.nic	chr19	+	2156	14	NIC	ENSG00000124440.16	novel	2101	13	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_2	29.9782958963993	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATGTGTGAGTATCCTG	46292695	True	NA	NA	False	AATAAA	-13	NA	46296998	46338538	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_46297103_46303897_46304089_46308220_46308306_46308662_46308776_46309150_46309360_46312160_46312268_46312505_46312654_46320442_46320562_46321775_46321967_46325534_46325640_46329206_46329479_46331155_46331274_46334904_46334987_46338226
transcript_108508.nic	chr19	+	2360	14	NIC	ENSG00000124440.16	novel	5856	15	NA	NA	-43	-60	combination_of_known_junctions	FALSE	canonical	3	44	junction_2	26.7701149279273	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTTCTTGTATTATTATT	46292695	True	NA	16	True	NA	NA	NA	46296998	46340040	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_46297103_46303897_46304089_46308220_46308306_46308662_46308776_46309150_46309360_46312160_46312268_46312505_46312654_46320442_46320562_46321775_46321967_46325534_46325640_46329206_46329479_46331155_46331274_46334904_46334987_46339524
transcript_108514.known	chr19	+	2101	13	FSM	ENSG00000124440.16	ENST00000244302.8	2101	13	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_2	14.2563338750029	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	46292742	True	NA	54	True	NA	NA	NA	46297045	46331513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_46297103_46303897_46304089_46305244_46305391_46308220_46308306_46308662_46308776_46309150_46309360_46312160_46312268_46312505_46312654_46320442_46320562_46321775_46321967_46325534_46325640_46329206_46329479_46331155
transcript_10852.known	chr1	+	3950	3	FSM	ENSG00000171492.14	ENST00000337338.9	3950	3	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	34.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAAGCTGTATTTTCTGTG	89817621	True	NA	NA	False	NA	NA	NA	89821031	89936611	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_89821292_89843637_89843783_89933066
transcript_108524.nic	chr19	+	1985	12	NIC	ENSG00000124440.16	novel	2101	13	NA	NA	-43	0	combination_of_known_junctions	TRUE	canonical	3	44	junction_2	26.5133679053784	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAATGGGACCTTGTCAAA	46292695	True	NA	37	True	NA	NA	NA	46296998	46331496	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_46297103_46303897_46304089_46308220_46308306_46308662_46308776_46309150_46309360_46312160_46312268_46312505_46312654_46320442_46320562_46321775_46321967_46325534_46325640_46329206_46329479_46331155
transcript_108531.known	chr19	+	1886	14	FSM	ENSG00000011485.15	ENST00000478046.5	1886	14	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_12	345.827333186228	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATCAGTATTTCTTTAAT	46332404	True	NA	NA	False	NA	NA	NA	46347100	46392981	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_46347218_46353747_46353990_46375603_46375752_46376452_46376575_46383410_46383477_46383779_46383879_46384803_46384910_46387092_46387236_46387365_46387454_46388407_46388449_46388552_46388732_46390050_46390133_46391150_46391259_46392636
transcript_108534.known	chr19	+	2139	13	FSM	ENSG00000011485.15	ENST00000012443.9	2139	13	0	0	0	0	multi-exon	TRUE	canonical	3	822	junction_4	83.009161141005	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAAGTGGCCTCTGCCTC	46332390	True	NA	NA	False	NA	NA	NA	46347086	46390975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_46347218_46353747_46353990_46375603_46375752_46376452_46376575_46383410_46383477_46383779_46383879_46384803_46384910_46387092_46387236_46387365_46387454_46388407_46388449_46388552_46388732_46390050_46390133_46390283
transcript_10854.known	chr1	+	3345	3	FSM	ENSG00000171492.14	ENST00000394593.7	3345	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	100	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTTTTTTGAGGGGTCT	89821684	True	NA	20	True	ATTAAA	-20	NA	89821920	89936001	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_89822186_89843637_89843783_89933066
transcript_108542.known	chr19	+	1929	12	FSM	ENSG00000011485.15	ENST00000391919.1	1929	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	282.899947269859	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTCTCTGGATGGTGGA	46332411	True	NA	22	True	AATAAA	-18	NA	46347107	46390852	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_46347218_46353747_46353990_46375603_46375752_46376452_46376575_46383779_46383879_46384803_46384910_46387092_46387236_46387365_46387454_46388407_46388449_46388552_46388732_46390050_46390133_46390283
transcript_108549.known	chr19	-	3236	1	FSM	ENSG00000169515.8	ENST00000307522.5	3236	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTGCCTGTGTGGCTCTG	-46410184	True	NA	-8	True	AAAACA	-42	NA	46413564	46410328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46410300_46413600
transcript_10855.known	chr1	+	9729	12	FSM	ENSG00000162664.17	ENST00000340281.9	9729	12	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_4	32.8074774786541	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGTTCCTGTCTGAAAAA	89989079	True	NA	15	True	AATAAA	-16	NA	89995109	90035533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_89995274_89998109_89998155_90005002_90005039_90005132_90005245_90007344_90007751_90010087_90010287_90013125_90013238_90017316_90017465_90018684_90018785_90020791_90020923_90022249_90022346_90027353
transcript_108550.known	chr19	-	4240	1	FSM	ENSG00000277531.3	ENST00000617053.3	4240	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAGTCTGCCCCTTGACA	-46428830	True	NA	NA	False	AATAAA	-16	NA	46428936	46424696	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46424700_46428900
transcript_108553.known	chr19	-	3335	3	FSM	ENSG00000182013.18	ENST00000438932.2	3335	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	40.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTTGTAGGTGAGGATT	-46468849	False	NA	-9	True	AATAAA	-27	NA	46471407	46466490	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46468578_46469937_46471115_46471336
transcript_108554.known	chr19	-	3684	3	FSM	ENSG00000182013.18	ENST00000313683.15	3684	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	5.5	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCCTGTTAAGTCTCTTG	-46469005	True	NA	-21	True	AATAAA	-15	NA	46471563	46466502	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46468578_46469732_46471115_46471336
transcript_108555.nnic	chr19	-	3763	3	NNC	ENSG00000182013.18	novel	3684	3	NA	NA	-12	-4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	41.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTGTCCTGTTAAGTCT	-46469017	False	NA	-25	True	AATAAA	-11	NA	46471575	46466506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_46468578_46469661_46471115_46471336
transcript_108557.known	chr19	+	1995	1	FSM	ENSG00000204850.4	ENST00000377652.4	1995	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGCATATGTATGATTG	NA	False	NA	9	True	AATAAA	-21	NA	46494507	46496502	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_46494500_46496500
transcript_108558.known	chr19	-	4677	1	FSM	ENSG00000204851.7	ENST00000599531.2	4677	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTCTTCCCAGCCACGT	-46495433	True	NA	NA	False	AATAAA	-17	NA	46495867	46491190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46491200_46495900
transcript_108560.known	chr19	+	880	7	FSM	ENSG00000160014.17	ENST00000602169.2	880	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	1853.63531712386	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGCATGATTGCTCTTT	46549392	True	NA	20	True	GATAAA	-20	NA	46601346	46609303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_46601438_46605826_46605858_46605993_46606186_46608196_46608341_46608481_46608589_46608845_46608982_46609124
transcript_108568.known	chr19	+	702	6	FSM	ENSG00000160014.17	ENST00000391918.6	702	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	1581.62377321536	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCATGATTGCTCTTTCT	46601040	False	NA	22	True	GATAAA	-22	NA	46601073	46609305	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_46601177_46605826_46605858_46608196_46608341_46608481_46608589_46608845_46608982_46609124
transcript_108573.known	chr19	+	540	6	FSM	ENSG00000160014.17	ENST00000594523.5	540	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1594.56539533504	2239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGATCTCTCTCTTCT	46549411	True	NA	NA	False	NA	NA	NA	46601365	46609182	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_46601438_46605826_46605858_46608204_46608341_46608481_46608589_46608845_46608982_46609124
transcript_108575.known	chr19	+	927	5	FSM	ENSG00000160014.17	ENST00000597868.5	927	5	0	0	0	0	multi-exon	FALSE	canonical	3	3515	junction_4	254.544200483924	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCATGATTGCTCTTTCT	46549412	True	NA	22	True	GATAAA	-22	NA	46601366	46609305	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_46601438_46605826_46605858_46608196_46608341_46608481_46608982_46609124
transcript_108578.known	chr19	+	696	6	FSM	ENSG00000160014.17	ENST00000477244.5	696	6	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_2	1441.09661022431	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTGATAAAGCAACAAAAGA	46549354	True	NA	-8	True	NA	NA	NA	46601308	46609275	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_46601438_46605826_46605858_46608198_46608341_46608481_46608589_46608845_46608982_46609124
transcript_108579.known	chr19	-	2078	3	FSM	ENSG00000160013.9	ENST00000291294.7	2078	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATGTTATGTGTCCTTA	NA	False	NA	NA	False	AATAAA	-25	NA	46625089	46620467	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46621673_46623457_46624238_46624996
transcript_10858.known	chr1	+	9433	12	FSM	ENSG00000162664.17	ENST00000370447.3	9433	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	65.9684372313291	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTGTTCCTGTCTGAAA	89989106	True	NA	13	True	AATAAA	-14	NA	89995136	90035531	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_89995274_89998109_89998155_90005002_90005039_90005132_90005245_90007611_90007751_90010087_90010287_90013125_90013238_90017316_90017465_90018684_90018785_90020791_90020923_90022249_90022346_90027353
transcript_108580.known	chr19	-	3321	19	FSM	ENSG00000105287.13	ENST00000433867.5	3321	19	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_18	45.9309734382764	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACGGCACTCTCGAATCAT	-46717104	False	NA	-9	True	ATTAAA	-38	NA	46717127	46674316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46674736_46675032_46675119_46678395_46678664_46681649_46681749_46689536_46689699_46690599_46690707_46691734_46691808_46691932_46691986_46693874_46694134_46697156_46697235_46697732_46697851_46700798_46700953_46701034_46701113_46704168_46704392_46704494_46704650_46710906_46711039_46713862_46714002_46716130_46716536_46716814
transcript_108581.nic	chr19	-	3138	19	NIC	ENSG00000105287.13	novel	2906	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_18	50.2095608425328	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACACGGCACTCTCGAATC	-46712939	True	NA	-11	True	ATTAAA	-36	NA	46717082	46674318	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_46674736_46675032_46675119_46678395_46678664_46681649_46681749_46689536_46689699_46690599_46690707_46691734_46691808_46691932_46691986_46693874_46694134_46697156_46697235_46697732_46697851_46700798_46700953_46701034_46701113_46704168_46704392_46704494_46704650_46710906_46711039_46713862_46714002_46716130_46716536_46716950
transcript_108582.known	chr19	-	3588	18	FSM	ENSG00000105287.13	ENST00000291281.9	3588	18	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_17	34.3417588568798	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGGCACTCTCGAATCATT	-46712971	True	NA	-8	True	ATTAAA	-39	NA	46717114	46674315	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46674736_46675032_46675119_46678395_46678664_46681649_46681749_46689536_46689699_46690599_46690707_46691734_46691808_46691932_46691986_46693874_46694134_46697156_46697235_46697732_46697851_46700798_46700953_46701034_46701113_46704168_46704392_46704494_46704650_46710906_46711039_46713862_46714002_46716130
transcript_108584.known	chr19	-	2923	17	FSM	ENSG00000105287.13	ENST00000600194.5	2923	17	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_16	32.7890987982287	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACACGGCACTCTCGAAT	-46714301	False	NA	-12	True	ATTAAA	-35	NA	46714324	46674319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46674736_46675032_46675119_46678395_46678664_46681649_46681749_46689536_46689699_46690599_46690707_46691734_46691808_46691932_46691986_46693874_46694134_46697156_46697235_46697732_46697851_46700798_46700953_46701034_46701113_46704168_46704392_46704494_46704650_46710906_46711039_46713862
transcript_108597.known	chr19	-	2608	19	FSM	ENSG00000090372.15	ENST00000539396.5	2608	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	216.620251438626	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGACTCCAGAAGGTGCC	NA	False	NA	NA	False	NA	NA	NA	46746994	46720070	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46720339_46720535_46720772_46721985_46722073_46722241_46722341_46722809_46722951_46723113_46723285_46724806_46724929_46725331_46725380_46725472_46725649_46727451_46727547_46727893_46728008_46728617_46728778_46730731_46730874_46733038_46733237_46736822_46736902_46738163_46738238_46738784_46738889_46746148_46746212_46746763
transcript_108609.known	chr19	-	3176	18	FSM	ENSG00000090372.15	ENST00000263280.11	3176	18	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_10	81.693748304939	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGTGACGGTGCCATCT	-46733321	True	NA	-8	True	AATAAA	-14	NA	46746450	46719510	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46720339_46720535_46720772_46721985_46722073_46722241_46722341_46722809_46722951_46723113_46723285_46724806_46724929_46725331_46725380_46725472_46725649_46727451_46727547_46727893_46728008_46728617_46728778_46730731_46730874_46733038_46733237_46736822_46736902_46738163_46738238_46738784_46738889_46746148
transcript_108612.known	chr19	-	3628	18	FSM	ENSG00000090372.15	ENST00000391910.7	3628	18	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_10	182.158796080835	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGTGACGGTGCCATCT	NA	False	NA	-8	True	AATAAA	-14	NA	46746881	46719510	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46720339_46720535_46720772_46721985_46722073_46722241_46722341_46722809_46722951_46723113_46723285_46724806_46724929_46725331_46725380_46725472_46725649_46727451_46727568_46727893_46728008_46728617_46728778_46730731_46730874_46733038_46733237_46736822_46736902_46738163_46738238_46738784_46738889_46746148
transcript_10862.nic	chr1	+	1147	8	ISM	ENSG00000162664.17	ENST00000340281.9	9729	12	-24	18168	-24	-10861	5prime_fragment	FALSE	canonical	3	138	junction_4	30.1635000405105	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTGAACTGCATCTGGA	89989055	True	NA	NA	False	AAGAAA	-3	NA	89995085	90017365	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_89995274_89998109_89998155_90005002_90005039_90005132_90005245_90007344_90007751_90010087_90010287_90013125_90013238_90017316
transcript_10865.nic	chr1	+	1020	7	ISM	ENSG00000162664.17	ENST00000340281.9	9729	12	-24	22374	-24	6710	5prime_fragment	FALSE	canonical	3	138	junction_4	26.1262958211327	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGCGAATTGAGGCTCGGC	89989055	True	NA	NA	False	AAGAAA	-2	NA	89995085	90013159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_89995274_89998109_89998155_90005002_90005039_90005132_90005245_90007344_90007751_90010087_90010287_90013125
transcript_108657.known	chr19	-	2882	8	FSM	ENSG00000105281.12	ENST00000542575.6	2882	8	0	0	0	0	multi-exon	FALSE	canonical	3	748	junction_7	92.8512086015875	6461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTGTTCTTGAGAATTT	-46764461	True	NA	-5	True	AATAAA	-21	NA	46788594	46774882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46775748_46776974_46777110_46777210_46777406_46778674_46778909_46782382_46782550_46784096_46784145_46784516_46784560_46787399
transcript_10866.nic	chr1	+	1071	7	ISM	ENSG00000162664.17	ENST00000340281.9	9729	12	-24	22323	-24	6761	5prime_fragment	FALSE	canonical	3	138	junction_4	26.1262958211327	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTGAGAAATACGGAGATG	89989055	True	NA	NA	False	NA	NA	NA	89995085	90013210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_89995274_89998109_89998155_90005002_90005039_90005132_90005245_90007344_90007751_90010087_90010287_90013125
transcript_108670.known	chr19	-	1750	8	FSM	ENSG00000105281.12	ENST00000412532.6	1750	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_7	311.127836447086	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATTTTTTTTAGCAATAA	-46787329	False	NA	-4	True	NA	NA	NA	46787342	46774923	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46775748_46776974_46777110_46777210_46777406_46778674_46778909_46782382_46782550_46784096_46784145_46784516_46784560_46787238
transcript_108686.known	chr19	-	1872	7	FSM	ENSG00000105281.12	ENST00000434726.6	1872	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	345.710219049937	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGTGTTCTTGAGAAT	-46784811	False	245	-7	True	AATAAA	-19	NA	46784824	46774884	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46775748_46776974_46777110_46777210_46777406_46778674_46778909_46782382_46782550_46784096_46784145_46784594
transcript_108694.known	chr19	+	583	5	FSM	ENSG00000181027.11	ENST00000595570.5	583	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	17.8097585609688	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTGCCCGAGCTGGTAGAC	46744578	True	NA	NA	False	NA	NA	NA	46746053	46755634	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_46746091_46748026_46748089_46748514_46748666_46748774_46748885_46755411
transcript_108697.known	chr19	+	597	5	FSM	ENSG00000181027.11	ENST00000600629.5	597	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	19.4855715851499	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCAGCCGACACGCTCCC	46744582	True	NA	NA	False	NA	NA	NA	46746057	46755690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_46746091_46747233_46747306_46748026_46748089_46748514_46748666_46755411
transcript_108698.known	chr19	+	569	5	FSM	ENSG00000181027.11	ENST00000602250.5	569	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	18.417043736713	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGTTCGAGGCATTTGAC	46744582	True	NA	NA	False	NA	NA	NA	46746057	46755610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_46746091_46747233_46747306_46748026_46748089_46748514_46748718_46755411
transcript_108702.known	chr19	+	3411	4	FSM	ENSG00000181027.11	ENST00000318584.10	3411	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	18.4089350286454	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GGTTAAAAAAAAAAAAAAAA	46744581	True	NA	131	True	NA	NA	NA	46746056	46758575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_46746091_46748026_46748089_46748514_46748666_46755411
transcript_108705.known	chr19	+	2801	4	FSM	ENSG00000181027.11	ENST00000391909.7	2801	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	13.5728487143349	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAAAAGAACCGAC	46744581	True	NA	NA	False	NA	NA	NA	46746056	46757913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_46746091_46748026_46748089_46748514_46748718_46755411
transcript_108711.known	chr19	+	633	3	FSM	ENSG00000181027.11	ENST00000601299.5	633	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	7.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACCCTGCCAGGTGCCTG	46744570	True	NA	NA	False	NA	NA	NA	46746045	46755937	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_46746091_46748026_46748089_46755411
transcript_108714.known	chr19	-	2240	1	FSM	ENSG00000090372.15	ENST00000601869.1	2240	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGGGTGACGGTGCCAT	-46721706	False	NA	-10	True	AATAAA	-12	NA	46721752	46719512	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46719500_46721800
transcript_108715.known	chr19	-	2031	7	FSM	ENSG00000105281.12	ENST00000594991.5	2031	7	0	0	0	0	multi-exon	FALSE	canonical	3	787	junction_4	83.113877702022	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGTGTTCTTGAGAAT	-46784892	False	245	-7	True	AATAAA	-19	NA	46784905	46774884	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46775748_46776974_46777110_46777210_46777406_46778674_46778909_46782382_46782550_46784096_46784145_46784516
transcript_108717.known	chr19	-	789	5	FSM	ENSG00000042753.12	ENST00000263270.11	789	5	0	0	0	0	multi-exon	FALSE	canonical	3	1621	junction_4	352.97547719353	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCGTCTTTGAGCCCTT	-46831494	True	NA	-13	True	AATAAA	-19	NA	46850846	46838166	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46838549_46838739_46838800_46839464_46839579_46845992_46846143_46850763
transcript_108719.known	chr19	-	793	5	FSM	ENSG00000042753.12	ENST00000352203.8	793	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	981.853699641652	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGAACCAGATACCTAGG	-46850605	False	NA	18	True	NA	NA	NA	46850777	46838135	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46838549_46838739_46838800_46839464_46839621_46845992_46846143_46850763
transcript_108721.known	chr19	-	636	4	FSM	ENSG00000042753.12	ENST00000593442.5	636	4	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_3	1074.25229811251	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGCCCTTGCCTGTCTC	-46831482	True	NA	-4	True	AATAAA	-28	NA	46850834	46838157	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46838549_46838739_46838800_46839464_46839579_46850763
transcript_108723.known	chr19	-	315	4	FSM	ENSG00000042753.12	ENST00000601649.1	315	4	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	983.499308026645	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCAGGCGAGCCCCACCCC	-46850736	False	NA	NA	False	NA	NA	NA	46850766	46838446	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46838549_46838739_46838800_46845992_46846143_46850763
transcript_108724.known	chr19	-	554	2	FSM	ENSG00000042753.12	ENST00000597421.1	554	2	0	0	0	0	multi-exon	FALSE	canonical	3	1621	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTTTTTGCTGGTGCG	-46831473	True	NA	-2	True	ATTAAA	-22	NA	46850825	46845650	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46846143_46850763
transcript_108725.known	chr19	-	898	5	FSM	ENSG00000042753.12	ENST00000601498.5	898	5	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_4	853.448006617861	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGCCCTTGCCTGTCTC	-46850286	False	NA	-4	True	AATAAA	-28	NA	46850316	46838157	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_46838549_46838739_46838800_46839464_46839579_46845992_46846143_46850133
transcript_108726.known	chr19	+	9290	7	FSM	ENSG00000160007.19	ENST00000672722.1	9290	7	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	20.2402239776804	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAGAGAAGTGAAGGGGG	46858001	True	NA	18	True	AATAAA	-22	NA	46860996	47005077	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_46861210_46918487_46922357_46937263_46937409_46987988_46988067_46989543_46989676_46999303_46999410_47000330
transcript_108727.nic	chr19	+	1876	2	ISM	ENSG00000160007.19	ENST00000672722.1	9290	7	-30	84957	-30	-77630	5prime_fragment	FALSE	canonical	3	86	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAAATTATAGATAAAGCAA	46860455	False	NA	NA	False	NA	NA	NA	46860966	46920120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_46861210_46918487
transcript_108728.known	chr19	+	2622	1	FSM	ENSG00000279948.1	ENST00000624074.1	2622	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATTAT	46946517	False	NA	NA	False	NA	NA	NA	46946534	46949156	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_46946500_46949200
transcript_10873.nic	chr1	+	893	6	ISM	ENSG00000162664.17	ENST00000340281.9	9729	12	-24	25340	-24	3744	5prime_fragment	TRUE	canonical	3	138	junction_4	28.6188748905333	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGCAGCCATTTAATAAG	89989055	True	NA	-54	True	AATAAA	-9	NA	89995085	90010193	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_89995274_89998109_89998155_90005002_90005039_90005132_90005245_90007344_90007751_90010087
transcript_108731.known	chr19	+	2100	12	FSM	ENSG00000130751.10	ENST00000602212.6	2100	12	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_3	14.9118622701404	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGAGCTCCTCTGTCCA	47019694	True	NA	26	True	ATTAAA	-34	NA	47019836	47045775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_47019998_47021005_47021170_47021611_47021848_47032277_47032352_47032642_47032733_47035963_47036130_47039035_47039152_47039406_47039565_47040443_47040551_47040977_47041126_47042809_47042905_47045190
transcript_108733.nic	chr19	+	2087	12	NIC	ENSG00000130751.10	novel	2100	12	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	15.4764550578298	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTGGGCTCCGGGCTG	47019644	True	NA	10	True	ATTAAA	-18	NA	47019786	47045759	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_47019998_47021005_47021170_47021611_47021848_47032277_47032352_47032642_47032733_47035963_47036130_47039035_47039152_47039406_47039565_47040443_47040551_47041024_47041126_47042809_47042905_47045190
transcript_108742.known	chr19	+	1643	10	FSM	ENSG00000130751.10	ENST00000602189.5	1643	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	20.0929936809259	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCTGAGAATTAAACGCCG	47019706	True	NA	-22	True	NA	NA	NA	47019848	47045727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_47019998_47032277_47032352_47032642_47032733_47035963_47036130_47039035_47039152_47039403_47039565_47040443_47040551_47040977_47041126_47042809_47042905_47045190
transcript_108749.nic	chr19	+	1408	8	NIC	ENSG00000130751.10	novel	1341	8	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	2	23	junction_5	12.1638474042331	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTGGGCTCCGGGCTG	47035041	True	NA	10	True	ATTAAA	-18	NA	47035309	47045759	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_47035359_47035963_47036130_47039035_47039152_47039406_47039565_47040443_47040551_47040977_47041126_47042809_47042905_47045190
transcript_108750.known	chr19	+	1341	8	FSM	ENSG00000130751.10	ENST00000439365.6	1341	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	13.8755400703864	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGTTTGGGCTCCGGGCT	47035060	True	NA	9	True	ATTAAA	-17	NA	47035328	47045758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_47035359_47035963_47036130_47039035_47039152_47039406_47039565_47040443_47040551_47041024_47041126_47042809_47042905_47045190
transcript_108757.nnic	chr19	+	1260	7	NIC	ENSG00000130751.10	novel	1341	8	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_5	16.2549137869821	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTGGGCTCCGGGCTG	47035041	True	NA	10	True	ATTAAA	-18	NA	47035309	47045759	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_47035359_47035963_47036130_47039035_47039152_47039406_47039565_47040443_47040551_47042809_47042905_47045190
transcript_108765.nic	chr19	+	1134	6	NIC	ENSG00000130751.10	novel	1341	8	NA	NA	-19	0	combination_of_known_junctions	TRUE	canonical	2	4	junction_2	21.4997674406027	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTGGGCTCCGGGCTG	47035041	True	NA	10	True	ATTAAA	-18	NA	47035309	47045759	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_47035359_47035963_47036130_47040443_47040551_47040977_47041126_47042809_47042905_47045190
transcript_108776.known	chr19	-	655	3	FSM	ENSG00000130748.7	ENST00000253047.7	655	3	0	0	0	0	multi-exon	FALSE	canonical	3	1027	junction_1	6	315	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCAGAGTATTGGTTCGT	-47045167	True	NA	-7	True	ATTAAA	-20	NA	47048624	47045908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_47046253_47046592_47046686_47048406
transcript_108786.known	chr19	+	2673	10	FSM	ENSG00000142230.13	ENST00000660039.1	2673	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	1246.79477456258	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTATTCTGATCCTGCA	47101852	True	NA	9	True	AATAAA	-9	NA	47130865	47210623	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_47131029_47143493_47143606_47150201_47150376_47152897_47153041_47155113_47155214_47156986_47157182_47169817_47169924_47197232_47197378_47203670_47203741_47209158
transcript_108788.known	chr19	+	2211	10	FSM	ENSG00000142230.13	ENST00000414294.6	2211	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	1250.51634767502	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTGTTTTTCTTCCAC	47101845	True	NA	21	True	AATAAA	-17	NA	47130858	47210191	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_47131029_47143493_47143606_47150201_47150376_47152897_47153041_47155113_47155214_47169817_47169924_47180145_47180304_47197232_47197378_47203670_47203741_47209158
transcript_108791.nnic	chr19	+	2143	10	NNC	ENSG00000142230.13	novel	2211	10	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	canonical	3	232	junction_8	1137.71298643646	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGCTTGTTTTTCTTCC	47130674	False	NA	19	True	AATAAA	-15	NA	47130792	47210189	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_47131029_47143493_47143606_47150201_47150376_47152897_47153041_47155113_47155214_47169817_47169924_47197232_47197378_47203670_47203741_47205103_47205130_47209158
transcript_108793.nic	chr19	+	2009	9	NIC	ENSG00000142230.13	novel	2522	9	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	3	101	junction_1	958.523465740406	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCTTGTTTTTCTTCCA	47130706	True	NA	20	True	AATAAA	-16	NA	47130731	47210190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_47130859_47143493_47143606_47150201_47150376_47152897_47153041_47155113_47155214_47169817_47169924_47197232_47197378_47203670_47203741_47209158
transcript_108796.known	chr19	+	2522	9	FSM	ENSG00000142230.13	ENST00000270225.12	2522	9	0	0	0	0	multi-exon	FALSE	canonical	3	2804	junction_8	145.97345649124	1485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCAGCAGTTAGTCGGG	47101821	True	NA	22	True	AATAAA	-22	NA	47130834	47210636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_47131029_47143493_47143606_47150201_47150376_47152897_47153041_47155113_47155214_47169817_47169924_47197232_47197378_47203670_47203741_47209158
transcript_108802.known	chr19	+	2106	9	FSM	ENSG00000142230.13	ENST00000596995.1	2106	9	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	971.949072739925	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCTTGTTTTTCTTCCA	47101875	True	NA	20	True	AATAAA	-16	NA	47130888	47210190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_47131113_47143493_47143606_47150201_47150376_47152897_47153041_47155113_47155214_47169817_47169924_47197232_47197378_47203670_47203741_47209158
transcript_108805.known	chr19	+	1851	8	FSM	ENSG00000142230.13	ENST00000392776.3	1851	8	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_6	987.283202758449	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGTTACTTGCTTTAGG	47101881	True	NA	0	True	TTTAAA	-10	NA	47130894	47210170	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_47131029_47143493_47143606_47150201_47150376_47152897_47153041_47155113_47155214_47169817_47169924_47203670_47203741_47209158
transcript_108818.known	chr19	-	1846	4	FSM	ENSG00000105327.18	ENST00000439096.3	1846	4	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_3	56.6215506675683	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATACTCTTTCTGCTTGCCT	-47228337	True	NA	-7	True	AATAAA	-18	NA	47231199	47220823	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_47221919_47226563_47226755_47228157_47228447_47230928
transcript_108820.nnic	chr19	-	1593	3	NIC	ENSG00000105327.18	novel	1846	4	NA	NA	-36	0	combination_of_known_splicesites	FALSE	canonical	3	76	junction_2	68	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATACTCTTTCTGCTTGCCT	-47228373	True	NA	-7	True	AATAAA	-18	NA	47231235	47220823	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_47221919_47226563_47226755_47230928
transcript_108821.nnic	chr19	+	2068	14	NNC	ENSG00000105321.14	novel	2163	14	NA	NA	-20	131	at_least_one_novel_splicesite	TRUE	canonical	3	14	junction_12	53.5041888533232	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCTTGAACTGTGTTTC	47256490	True	NA	3	True	ATTAAA	-15	NA	47256502	47273832	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_47256610_47258329_47258404_47258558_47258664_47260320_47260423_47260587_47260840_47264602_47264687_47264772_47264947_47266610_47266793_47270406_47270454_47270552_47270689_47271081_47271188_47271273_47271404_47272068_47272162_47273356
transcript_108822.known	chr19	+	2163	14	FSM	ENSG00000105321.14	ENST00000643617.1	2163	14	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_12	47.6210385608028	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCGAGCCAGTCTTCAGG	47256510	False	NA	NA	False	NA	NA	NA	47256522	47273701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_47256610_47258329_47258404_47258558_47258664_47260320_47260423_47260587_47260840_47264602_47264687_47264772_47264947_47266610_47266793_47270406_47270454_47270552_47270689_47271081_47271188_47271273_47271650_47272068_47272162_47273356
transcript_108825.nic	chr19	+	2648	14	NIC	ENSG00000105321.14	novel	834	5	NA	NA	-63	131	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	59.6865580101633	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCTTGAACTGTGTTTC	47257458	False	NA	3	True	ATTAAA	-15	NA	47257468	47273832	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_47257910_47258329_47258404_47258558_47258664_47260320_47260423_47260587_47260840_47264602_47264687_47264772_47264947_47266610_47266793_47270406_47270454_47270552_47270689_47271081_47271188_47271273_47271650_47272068_47272162_47273356
transcript_108827.nic	chr19	+	2391	14	NIC	ENSG00000105321.14	novel	834	5	NA	NA	-61	131	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	56.69778702255	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCTTGAACTGTGTTTC	47257460	False	NA	3	True	ATTAAA	-15	NA	47257470	47273832	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_47257655_47258329_47258404_47258558_47258664_47260320_47260423_47260587_47260840_47264602_47264687_47264772_47264947_47266610_47266793_47270406_47270454_47270552_47270689_47271081_47271188_47271273_47271650_47272068_47272162_47273356
transcript_108831.known	chr19	+	2027	12	FSM	ENSG00000105321.14	ENST00000221922.11	2027	12	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	18.1581664345402	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATTCCCCCAGGTGTGT	47254401	True	NA	9	True	AATAAA	-18	NA	47256524	47271953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_47256610_47258329_47258404_47258558_47258664_47260320_47260423_47260587_47260840_47264602_47264687_47264772_47264947_47266610_47266793_47270406_47270454_47270552_47270689_47271081_47271188_47271273
transcript_108835.nic	chr19	+	2383	12	NIC	ENSG00000105321.14	novel	834	5	NA	NA	-63	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	47.0996832822606	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATTCCCCCAGGTGTGT	47257458	False	NA	9	True	AATAAA	-18	NA	47257468	47271953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_47257910_47258329_47258404_47258558_47258664_47260320_47260423_47260587_47260840_47264602_47264687_47264772_47264947_47266610_47266793_47270406_47270454_47270552_47270689_47271081_47271188_47271273
transcript_108836.nic	chr19	+	2126	12	NIC	ENSG00000105321.14	novel	834	5	NA	NA	-61	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	41.7895158665859	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATTCCCCCAGGTGTGT	47257460	False	NA	9	True	AATAAA	-18	NA	47257470	47271953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_47257655_47258329_47258404_47258558_47258664_47260320_47260423_47260587_47260840_47264602_47264687_47264772_47264947_47266610_47266793_47270406_47270454_47270552_47270689_47271081_47271188_47271273
transcript_108839.nnic	chr19	+	810	2	Genic_Genomic	ENSG00000257704.4	novel	839	1	NA	NA	-537	-18	multi-exon	FALSE	canonical	3	65	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCCTGTTGTCTGCAGA	47274324	False	NA	16	True	AATAAA	-28	NA	47274347	47275705	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Genic_Genomic_chr19_+_47274499_47275046
transcript_108841.known	chr19	+	839	1	FSM	ENSG00000257704.4	ENST00000552360.4	839	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGCCTCCCCTCCCAAG	47274808	True	NA	34	True	NA	NA	NA	47274884	47275723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_47274900_47275700
transcript_108844.nic	chr19	+	4025	18	NIC	ENSG00000134815.19	novel	4338	17	NA	NA	-37	0	combination_of_known_junctions	TRUE	canonical	3	103	junction_1	54.9137732390471	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGTTAGGCCTGCACC	47343335	True	NA	17	True	AATAAA	-17	NA	47349277	47382279	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_47349353_47352753_47353736_47355038_47355351_47357865_47358121_47359967_47360071_47362475_47362694_47366980_47367156_47372729_47372924_47373598_47373701_47375465_47375709_47375923_47376098_47376442_47376561_47376914_47376990_47377099_47377207_47379709_47379986_47380815_47380993_47381185_47381325_47381979
transcript_108845.nic	chr19	+	4390	18	NIC	ENSG00000134815.19	novel	4338	17	NA	NA	-37	-60	combination_of_known_junctions	FALSE	canonical	3	103	junction_1	54.9137732390471	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGCCGGGCATGGTTGCTC	47343335	True	NA	4	True	AATAAA	-13	NA	47349277	47382644	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_47349353_47352753_47353736_47355038_47355351_47357865_47358121_47359967_47360071_47362475_47362694_47366980_47367156_47372729_47372924_47373598_47373701_47375465_47375709_47375923_47376098_47376442_47376561_47376914_47376990_47377099_47377207_47379709_47379986_47380815_47380993_47381185_47381325_47381979
transcript_108848.known	chr19	+	4338	17	FSM	ENSG00000134815.19	ENST00000328771.9	4338	17	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	54.4665895297291	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTGCTCACTCCCGTA	47343372	True	NA	18	True	AATAAA	-27	NA	47349314	47382704	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_47349353_47352753_47353736_47355038_47355351_47357865_47358121_47359967_47360071_47362475_47362694_47366980_47367156_47372729_47372924_47373598_47373701_47375465_47375709_47375923_47376098_47376442_47376561_47377099_47377207_47379709_47379986_47380815_47380993_47381185_47381325_47381979
transcript_108863.known	chr19	+	1838	11	FSM	ENSG00000134815.19	ENST00000460681.1	1838	11	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_5	57.2814105971562	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGTTAGGCCTGCACC	NA	False	NA	17	True	AATAAA	-17	NA	47372796	47382279	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_47372924_47373598_47373701_47375465_47375709_47375923_47376098_47376442_47376561_47376914_47376990_47377099_47377207_47379709_47379986_47380815_47380993_47381185_47381325_47381979
transcript_108865.known	chr19	-	1758	13	FSM	ENSG00000105419.18	ENST00000441740.6	1758	13	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_8	32.773104657461	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCAACTGGAGTTCTTG	-47419241	False	NA	-12	True	GATAAA	-17	NA	47419315	47403123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_47403554_47406459_47406527_47406887_47406972_47407078_47407138_47407351_47407429_47409098_47409248_47409435_47409548_47414716_47414816_47415050_47415102_47416651_47416703_47416803_47416964_47417177_47417351_47419069
transcript_108866.known	chr19	-	2021	13	FSM	ENSG00000105419.18	ENST00000558555.6	2021	13	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_8	25.8632890836069	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCAACTGGAGTTCTTG	-47418355	True	NA	-12	True	GATAAA	-17	NA	47419527	47403123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_47403554_47406459_47406527_47406887_47406972_47407078_47407138_47407351_47407429_47409098_47409248_47409435_47409548_47414716_47414867_47415050_47415102_47416651_47416703_47416803_47416964_47417177_47417351_47419069
transcript_108867.known	chr19	-	2104	13	FSM	ENSG00000105419.18	ENST00000331559.9	2104	13	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_5	54.5142692838816	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCAACTGGAGTTCTTG	-47418351	True	NA	-12	True	GATAAA	-17	NA	47419523	47403123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_47403554_47406459_47406527_47406887_47406972_47407078_47407138_47407351_47407567_47409098_47409248_47409435_47409548_47414716_47414816_47415050_47415102_47416651_47416703_47416803_47416964_47417177_47417351_47419069
transcript_108868.known	chr19	-	1918	13	FSM	ENSG00000105419.18	ENST00000561293.5	1918	13	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_5	51.3425316434197	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCACCAACTGGAGTTCT	-47419214	False	NA	-14	True	GATAAA	-15	NA	47419288	47403125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_47403554_47406459_47406527_47406887_47406972_47407078_47407138_47407351_47407567_47409098_47409248_47409435_47409548_47414716_47414867_47415050_47415102_47416651_47416703_47416803_47416964_47417177_47417351_47419069
transcript_10887.known	chr1	+	1538	4	FSM	ENSG00000162664.17	ENST00000361911.9	1538	4	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_3	6.97614984548545	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTAATCCATGCTTTG	89989103	True	NA	NA	False	TATAAA	-25	NA	89995133	90006449	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_89995274_89998109_89998155_90005002_90005039_90005132
transcript_108870.nic	chr19	-	2239	13	NIC	ENSG00000105419.18	novel	1918	13	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_5	51.8226141113446	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCACCAACTGGAGTTCT	-47419466	False	NA	-14	True	GATAAA	-15	NA	47419540	47403125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_47403554_47406459_47406527_47406887_47406972_47407078_47407138_47407351_47407636_47409098_47409248_47409435_47409548_47414716_47414867_47415050_47415102_47416651_47416703_47416803_47416964_47417177_47417351_47419069
transcript_108877.nic	chr19	-	1963	12	NIC	ENSG00000105419.18	novel	2021	13	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	49.8394115349365	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGAGCCACCAACTGGAGTT	-47419466	False	NA	-16	True	GATAAA	-13	NA	47419540	47403127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_47403554_47406887_47406972_47407078_47407138_47407351_47407429_47409098_47409248_47409435_47409548_47414716_47414867_47415050_47415102_47416651_47416703_47416803_47416964_47417177_47417351_47419069
transcript_108888.known	chr19	-	1636	12	FSM	ENSG00000118162.14	ENST00000338134.8	1636	12	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_6	24.8186813136549	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCAGTTGTCTCGATTC	-47481500	True	NA	-16	True	NA	NA	NA	47484219	47475149	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_47475545_47476531_47476715_47476802_47476939_47477705_47477782_47479862_47479941_47480297_47480408_47480759_47480834_47480957_47481034_47483160_47483216_47483294_47483380_47483501_47483585_47483934
transcript_10889.known	chr1	-	2467	2	FSM	ENSG00000233593.11	ENST00000670437.1	2467	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTTGTCATGCTCTGTGT	NA	False	NA	NA	False	ATTAAA	-22	NA	90836174	90830078	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_90832197_90835825
transcript_108892.nic	chr19	-	2047	11	NIC	ENSG00000118162.14	novel	1636	12	NA	NA	-13	0	intron_retention	FALSE	canonical	3	126	junction_6	22.7420315715197	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCAGTTGTCTCGATTC	-47484260	False	NA	-16	True	NA	NA	NA	47484278	47475149	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_47475545_47476531_47476715_47476802_47476939_47477705_47477782_47479862_47479941_47480297_47480834_47480957_47481034_47483160_47483216_47483294_47483380_47483501_47483585_47483934
transcript_108894.known	chr19	-	4959	10	FSM	ENSG00000118160.14	ENST00000236877.11	4959	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	4.00308522992263	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGGAGGGGTGTGTGTG	-47471380	True	NA	-1	True	AATAAA	-24	NA	47471893	47428016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_47430466_47432166_47432446_47437461_47437562_47437848_47437974_47441168_47441187_47441336_47441441_47447808_47448232_47456929_47457595_47465728_47466420_47471788
transcript_108899.nnic	chr19	-	754	3	NIC	ENSG00000118162.14	novel	1636	12	NA	NA	3540	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_2	98.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCAGTTGTCTCGATTC	-47480023	False	2719	-16	True	NA	NA	NA	47480038	47475149	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_47475545_47476531_47476715_47479862
transcript_108900.known	chr19	-	1662	11	FSM	ENSG00000105402.8	ENST00000263354.8	1662	11	0	0	0	0	multi-exon	FALSE	canonical	3	550	junction_8	38.5985751032341	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTCTTCCTCCTCACCT	-47507014	True	NA	-3	True	AATAAA	-20	NA	47515063	47487636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_47488390_47489710_47489762_47490787_47490857_47492014_47492120_47492960_47493046_47493118_47493175_47493415_47493494_47495549_47495597_47500632_47500750_47503422_47503503_47514842
transcript_108902.nnic	chr19	+	2967	7	NNC	ENSG00000024422.12	novel	3506	6	NA	NA	-33	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	29.6853873517295	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGGCAGTGAGGCTGG	47712574	True	NA	10	True	AATAAA	-15	NA	47713388	47743131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_47713539_47716557_47717017_47718508_47718607_47725811_47726225_47736368_47736534_47740880_47741847_47742415
transcript_108903.known	chr19	+	3506	6	FSM	ENSG00000024422.12	ENST00000263277.8	3506	6	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	11.1785508899857	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCAGTGAGGCTGGCTT	47712607	True	NA	13	True	AATAAA	-18	NA	47713421	47743134	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_47713539_47716557_47717017_47718508_47718607_47725811_47726225_47736368_47736534_47740880
transcript_108904.known	chr19	+	1766	5	FSM	ENSG00000024422.12	ENST00000538399.1	1766	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	30.9313756564431	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACACACTAATTCCTGG	47712607	True	NA	NA	False	NA	NA	NA	47713421	47741853	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_47713539_47718508_47718607_47725811_47726225_47736368_47736534_47740880
transcript_108913.known	chr19	+	1504	13	FSM	ENSG00000105373.19	ENST00000246802.10	1504	13	0	0	0	0	multi-exon	TRUE	canonical	3	927	junction_12	129.572695168902	1610	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGGGCTCCACGTGTGG	47738443	True	NA	27	True	AATAAA	-18	NA	47745545	47757058	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_47745784_47746966_47747032_47750177_47750287_47750907_47751108_47751519_47751591_47752511_47752608_47754526_47754632_47754708_47754892_47755347_47755524_47755755_47755823_47756527_47756605_47756687_47756745_47756998
transcript_10892.known	chr1	-	5702	6	FSM	ENSG00000122482.22	ENST00000370440.5	5702	6	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_5	66.9256303668482	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAAACATTTCTTATTTT	-91021452	False	2403	NA	False	AATAAA	-24	NA	91021473	90915297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_90916991_90918051_90918155_90937484_90938091_90938271_90941310_90982309_90982371_91021272
transcript_10893.known	chr1	-	5541	6	FSM	ENSG00000122482.22	ENST00000337393.10	5541	6	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_5	64.7870357401849	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATGTGAAACATTTCT	-91022014	False	NA	NA	False	AATAAA	-18	NA	91022035	90915303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_90916991_90918051_90918155_90937484_90938091_90938271_90941310_90982309_90982371_91021989
transcript_108949.known	chr19	+	881	7	NNC	ENSG00000178980.16	novel	758	6	NA	NA	-92	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1802.41813652906	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGCCTGTGAGGAGTGT	47778279	False	NA	30	True	AATAAA	-20	NA	47778584	47784684	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_47778815_47780119_47780132_47780733_47780750_47780863_47780918_47781107_47781183_47781289_47781389_47784289
transcript_108953.known	chr19	+	758	6	FSM	ENSG00000178980.16	ENST00000601048.6	758	6	0	0	0	0	multi-exon	FALSE	canonical	3	3659	junction_3	147.725420967415	2531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTGCCTGTGAGGAGT	47737037	True	NA	28	True	AATAAA	-18	NA	47778702	47784682	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_47778815_47780724_47780750_47780863_47780918_47781107_47781183_47781289_47781389_47784289
transcript_108954.known	chr19	+	550	6	FSM	ENSG00000178980.16	ENST00000593892.5	550	6	0	0	0	0	multi-exon	TRUE	canonical	2	87	junction_5	1468.23739224963	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGCCTCAGGCATCCTTC	47737011	True	NA	-90	True	NA	NA	NA	47778676	47784564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_47778815_47780724_47780750_47780863_47780918_47781107_47781183_47781289_47781389_47784405
transcript_108956.known	chr19	+	636	6	FSM	ENSG00000178980.16	ENST00000599874.5	636	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	1522.23380595755	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCCGGAATCCACACCAC	47737017	True	NA	NA	False	NA	NA	NA	47778682	47784457	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_47778815_47780724_47780750_47780863_47781001_47781107_47781183_47781289_47781389_47784289
transcript_108960.known	chr19	+	717	5	FSM	ENSG00000178980.16	ENST00000601419.5	717	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	1608.36438657414	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTCAATAAATATTGGATG	47737025	True	NA	0	True	NA	NA	NA	47778690	47784654	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_47778815_47780863_47780918_47781107_47781183_47781289_47781389_47784289
transcript_108961.known	chr19	+	2437	5	FSM	ENSG00000178980.16	ENST00000598273.5	2437	5	0	0	0	0	multi-exon	FALSE	canonical	3	3659	junction_2	153.511196660048	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAATGTGCCTGTGAGGAG	47778902	False	NA	27	True	AATAAA	-17	NA	47778932	47784681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_47780750_47780863_47780918_47781107_47781183_47781289_47781389_47784289
transcript_108962.known	chr19	+	674	4	FSM	ENSG00000178980.16	ENST00000601937.5	674	4	0	0	0	0	multi-exon	FALSE	canonical	3	3659	junction_1	138.602549279105	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCTGTGAGGAGTGTAT	47780802	False	NA	32	True	AATAAA	-22	NA	47780814	47784686	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_47780918_47781107_47781183_47781289_47781389_47784289
transcript_108963.known	chr19	-	2486	17	FSM	ENSG00000105499.14	ENST00000599921.6	2486	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	19.6602986688911	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTGTGTGTGTGTGTCT	-48110792	False	NA	-2	True	AATAAA	-23	NA	48110817	48047845	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48048389_48052996_48053148_48054877_48055050_48061997_48062153_48067790_48067887_48074766_48074875_48077770_48077825_48085058_48085113_48088685_48088713_48090363_48090418_48095463_48095605_48098138_48098260_48099670_48099861_48104587_48104725_48105332_48105445_48106521_48106562_48110486
transcript_108981.known	chr19	-	3125	28	FSM	ENSG00000105486.14	ENST00000263274.12	3125	28	0	0	0	0	multi-exon	FALSE	canonical	2	281	junction_27	88.6403624462092	1813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGACAGGGTCTGTGC	-48164301	True	NA	-9	True	AATAAA	-18	NA	48170344	48115444	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48115733_48115872_48115966_48117637_48117782_48119136_48119191_48121169_48121323_48122933_48123017_48123173_48123319_48127276_48127349_48127909_48128021_48131075_48131172_48132981_48133098_48133980_48134067_48135679_48135780_48136033_48136126_48137007_48137085_48137521_48137689_48139970_48140144_48143542_48143600_48143882_48143964_48149762_48149842_48150087_48150211_48151231_48151340_48153871_48153968_48157013_48157141_48161371_48161508_48162261_48162352_48165549_48165624_48170240
transcript_10900.known	chr1	-	2036	4	FSM	ENSG00000122482.22	ENST00000347275.9	2036	4	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_3	84.9012498272094	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATGTGAAACATTTCT	-91021436	False	NA	NA	False	AATAAA	-18	NA	91021457	90915303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_90916991_90918051_90918155_90982309_90982371_91021272
transcript_109000.known	chr19	-	3027	27	FSM	ENSG00000105486.14	ENST00000427526.6	3027	27	0	0	0	0	multi-exon	FALSE	canonical	2	34	junction_25	141.446311975949	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACTTTGTGACAGGGTC	-48164301	True	NA	-14	True	AATAAA	-13	NA	48170344	48115449	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48115733_48115872_48115966_48117637_48117782_48119136_48119191_48121169_48121323_48122933_48123017_48123173_48123319_48127276_48127349_48127909_48128021_48131075_48131172_48132981_48133098_48133980_48134067_48135679_48135780_48136033_48136126_48137007_48137085_48137521_48137689_48139970_48140144_48143542_48143600_48143882_48143964_48149762_48149842_48150087_48150211_48151231_48151337_48153871_48153968_48157013_48157141_48161371_48161508_48165549_48165624_48170240
transcript_109002.nnic	chr19	-	3325	27	NIC	ENSG00000105486.14	novel	3125	28	NA	NA	-54	0	combination_of_known_splicesites	FALSE	canonical	2	22	junction_21	128.143901405629	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACTTTGTGACAGGGTC	NA	False	NA	-14	True	AATAAA	-13	NA	48170657	48115449	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_48115733_48115872_48115966_48117637_48117782_48119136_48119191_48121169_48121323_48122933_48123017_48123173_48123319_48127276_48127349_48127909_48128021_48131075_48131172_48132981_48133098_48133980_48134067_48135679_48135780_48136033_48136126_48137007_48137085_48137521_48137689_48139970_48140144_48143542_48143600_48143882_48143964_48149762_48149842_48150087_48150211_48153871_48153968_48157013_48157141_48161371_48161508_48162261_48162352_48165549_48165624_48170240
transcript_10901.known	chr1	-	1253	4	FSM	ENSG00000122482.22	ENST00000361321.5	1253	4	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_3	83.0675762390009	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTCTAAAAGAAATATGT	-91019869	True	NA	NA	False	AAAAAG	-25	NA	91022272	90916184	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_90916991_90918051_90918155_90982309_90982371_91021989
transcript_109022.known	chr19	-	3179	26	FSM	ENSG00000105486.14	ENST00000536218.5	3179	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	133.817487646421	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTGACAGGGTCTGTG	-48170518	False	NA	-10	True	AATAAA	-17	NA	48170603	48115445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48115733_48115872_48115966_48117637_48117782_48119136_48119191_48121169_48121323_48122933_48123017_48123173_48123319_48127276_48127349_48127909_48128021_48131075_48131172_48132981_48133098_48133980_48134067_48135679_48135780_48136033_48136126_48137007_48137085_48137521_48137689_48139970_48140144_48143542_48143600_48143882_48143964_48149762_48149842_48150087_48150211_48157013_48157141_48161371_48161508_48162261_48162352_48165549_48165624_48170240
transcript_10904.nic	chr1	-	3516	4	ISM	ENSG00000122482.22	ENST00000370440.5	5702	6	-24	22601	-24	3050	5prime_fragment	FALSE	canonical	3	86	junction_3	43.9621048934951	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTAAAGGCATTGAACAGT	-91021476	False	2403	NA	False	AAGAAA	-13	NA	91021497	90937898	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_90938091_90938271_90941310_90982309_90982371_91021272
transcript_10906.nic	chr1	-	3560	4	ISM	ENSG00000122482.22	ENST00000337393.10	5541	6	-223	22595	14	3050	5prime_fragment	FALSE	canonical	3	93	junction_3	40.9579730401244	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTAAAGGCATTGAACAGT	-91019855	True	NA	NA	False	AAGAAA	-13	NA	91022258	90937898	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_90938091_90938271_90941310_90982309_90982371_91021989
transcript_109076.known	chr19	-	4296	15	FSM	ENSG00000105483.18	ENST00000519940.6	4296	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_12	23.1689667531412	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTATGTTGAATCAATC	-48254947	True	NA	NA	False	AATAAA	-6	NA	48255873	48209667	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48211976_48215339_48215385_48218870_48219013_48221729_48221856_48230437_48230701_48230776_48231007_48231659_48231811_48232452_48232494_48234402_48234544_48238382_48238533_48240961_48241064_48246074_48246382_48249522_48249634_48249750_48249848_48255791
transcript_109078.known	chr19	-	5610	14	FSM	ENSG00000105483.18	ENST00000651546.1	5610	14	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_9	18.4948417564907	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAGAAGTTAAATTGAT	-48254986	True	NA	NA	False	AATAAA	-38	NA	48255912	48208085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48211976_48215339_48215385_48218870_48219013_48221729_48221856_48230437_48230701_48230776_48231007_48231659_48231811_48232452_48232494_48234402_48234544_48238382_48238533_48240961_48241064_48249522_48249634_48249750_48249848_48255791
transcript_109084.known	chr19	-	3041	13	FSM	ENSG00000105483.18	ENST00000520753.5	3041	13	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	20.926292605768	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTAATCACTCAGAAGAT	-48254960	True	NA	NA	False	AATAAA	-18	NA	48255886	48210486	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48211976_48215339_48215385_48221729_48221856_48230437_48230701_48230776_48231007_48231659_48231811_48232452_48232494_48234402_48234544_48238382_48238533_48240961_48241064_48249522_48249634_48249750_48249848_48255791
transcript_109089.known	chr19	-	1903	12	FSM	ENSG00000105483.18	ENST00000521613.5	1903	12	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_10	16.3378584837399	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGGCATGTACCTATTG	NA	False	NA	NA	False	NA	NA	NA	48255946	48211565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48211976_48215339_48215385_48218870_48219013_48221729_48221856_48230437_48230701_48230776_48231007_48231659_48231811_48232452_48232494_48234402_48234544_48240961_48241064_48249750_48249848_48255791
transcript_1091.nic	chr1	+	3316	20	NIC	ENSG00000197530.13	novel	3252	21	NA	NA	-24	0	intron_retention	FALSE	canonical	3	41	junction_3	121.589404881763	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTTGCCTCTGCTGTCTG	1615346	False	NA	9	True	TATAAA	-15	NA	1615854	1630603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_1616101_1616507_1616615_1623430_1623700_1623773_1623946_1624794_1624902_1624990_1625186_1625285_1625429_1625545_1625654_1626649_1626755_1626836_1627000_1627073_1627208_1627295_1627445_1627672_1627830_1628018_1628180_1628272_1628400_1628488_1628723_1629132_1629312_1629384_1629567_1629638_1629705_1630291
transcript_109103.known	chr19	-	614	5	FSM	ENSG00000105483.18	ENST00000520007.5	614	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	12.3161479367536	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATTGGTTTATGTACA	-48254972	True	NA	-8	True	ATTAAA	-14	NA	48255898	48238335	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48238533_48240961_48241064_48249522_48249634_48249750_48249848_48255791
transcript_109106.known	chr19	+	2499	6	FSM	ENSG00000178150.10	ENST00000595607.6	2499	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	38.3478812974068	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTGGTGCAGTGACTCAC	48270017	True	NA	7	True	AATAAA	-18	NA	48270080	48287608	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48270220_48271244_48271450_48271726_48271829_48279730_48279809_48282370_48282498_48285760
transcript_10911.known	chr1	-	514	3	FSM	ENSG00000122482.22	ENST00000498303.5	514	3	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_2	28.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCATTAACCACTGGACA	-91022060	False	NA	NA	False	AATAAA	-7	NA	91022081	90940948	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_90941310_90982309_90982371_91021989
transcript_109110.known	chr19	-	437	3	FSM	ENSG00000268186.1	ENST00000600941.1	437	3	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTCTATGATACTTTTG	-48271267	False	NA	0	True	AATAAA	-18	NA	48271283	48262899	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48263185_48270144_48270234_48271220
transcript_109111.known	chr19	+	2206	5	FSM	ENSG00000178150.10	ENST00000315849.5	2206	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	17.7675969112314	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCCTGGTGCAGTGACTC	48270279	True	NA	5	True	AATAAA	-16	NA	48271396	48287606	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48271450_48271726_48271829_48279730_48279809_48282370_48282498_48285760
transcript_109115.nic	chr19	+	1100	5	NIC	ENSG00000142227.11	novel	753	4	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	51.1682274463363	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTTGATCTTCCTT	48321117	True	NA	11	True	AATAAA	-14	NA	48321467	48330553	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_48321978_48326829_48326923_48327520_48327624_48329351_48329493_48330300
transcript_109116.known	chr19	+	761	4	FSM	ENSG00000142227.11	ENST00000596315.5	761	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	56.334319517995	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTTGATCTTCCTT	48324996	False	NA	11	True	AATAAA	-14	NA	48325346	48330553	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48325611_48327520_48327624_48329351_48329493_48330300
transcript_109119.known	chr19	+	649	5	FSM	ENSG00000142227.11	ENST00000270221.11	649	5	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	15.7321327225523	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTTGATCTTCCTT	48324771	True	NA	11	True	AATAAA	-14	NA	48325551	48330553	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48325611_48326829_48326923_48327520_48327624_48329351_48329493_48330300
transcript_10912.nic	chr1	-	2185	3	ISM	ENSG00000122482.22	ENST00000370440.5	5702	6	-261	24350	-9	1301	5prime_fragment	FALSE	canonical	3	86	junction_2	32	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTTCATGAAAGACTCTG	-91021713	False	NA	NA	False	AAAACA	-9	NA	91021734	90939647	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_90941310_90982309_90982371_91021272
transcript_109123.nnic	chr19	-	2677	8	NNC	ENSG00000161558.11	novel	2263	8	NA	NA	-228	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_3	46.7223671471891	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGAGGCTACTCTTAACG	NA	False	NA	NA	False	AATAAA	-18	NA	48364287	48332356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_48333434_48334007_48334198_48342529_48342810_48343252_48343452_48345159_48345355_48360071_48360177_48363290_48363532_48363897
transcript_109125.known	chr19	-	2263	8	FSM	ENSG00000161558.11	ENST00000293261.8	2263	8	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_6	26.6105702490494	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGGCTACTCTTAACGC	-48363692	False	NA	NA	False	AATAAA	-19	NA	48363940	48332355	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48333434_48334007_48334198_48342529_48342810_48343320_48343452_48345159_48345355_48360071_48360177_48363290_48363532_48363897
transcript_109126.nnic	chr19	-	3030	8	NNC	ENSG00000161558.11	novel	2263	8	NA	NA	-228	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	47.0167143532109	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGAGGCTACTCTTAACG	NA	False	NA	NA	False	AATAAA	-18	NA	48364287	48332356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_48333434_48334007_48334198_48342529_48343163_48343252_48343452_48345159_48345355_48360071_48360177_48363290_48363532_48363897
transcript_109137.known	chr19	-	2272	7	FSM	ENSG00000161558.11	ENST00000435956.7	2272	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_5	33.8312807259133	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGATGAGGCTACTCTT	-48363811	False	NA	NA	False	AATAAA	-14	NA	48364059	48332360	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48333434_48334007_48334198_48342529_48342810_48343320_48343452_48345159_48345355_48363290_48363532_48363897
transcript_109141.nic	chr19	-	3120	7	NIC	ENSG00000161558.11	novel	2263	8	NA	NA	-228	0	intron_retention	FALSE	canonical	3	80	junction_5	27.3764903196561	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGAGGCTACTCTTAACG	NA	False	NA	NA	False	AATAAA	-18	NA	48364287	48332356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_48333434_48334007_48334198_48342529_48343452_48345159_48345355_48360071_48360177_48363290_48363532_48363897
transcript_109143.known	chr19	-	1960	6	FSM	ENSG00000161558.11	ENST00000377431.6	1960	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	52.784088511596	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGAGGCTACTCTTAACG	-48363307	True	NA	NA	False	AATAAA	-18	NA	48363938	48332356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48333434_48334007_48334198_48342529_48342810_48343320_48343452_48363290_48363532_48363897
transcript_109145.known	chr19	-	583	3	FSM	ENSG00000161558.11	ENST00000593914.5	583	3	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	28	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATGCCTGGTGGTGATA	-48363307	True	NA	NA	False	AATAAA	-8	NA	48363938	48359875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48360177_48363290_48363532_48363897
transcript_109149.known	chr19	-	1550	5	FSM	ENSG00000105438.9	ENST00000330720.7	1550	5	0	0	0	0	multi-exon	TRUE	canonical	3	917	junction_4	65.0499807840095	506	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTCTTTTGCTGCTCCTT	-48362203	True	NA	-15	True	AATAAA	-16	NA	48391551	48382574	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48383328_48384229_48384483_48389552_48389712_48390423_48390525_48391267
transcript_10915.nic	chr1	-	1963	3	ISM	ENSG00000122482.22	ENST00000370440.5	5702	6	-178	24489	74	1162	5prime_fragment	FALSE	canonical	3	86	junction_2	32	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACTACTGCTGTGAAGAG	-91021630	False	NA	NA	False	GATAAA	-2	NA	91021651	90939786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_90941310_90982309_90982371_91021272
transcript_109171.known	chr19	+	4443	12	FSM	ENSG00000105443.16	ENST00000452733.7	4443	12	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	25.9153102583227	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGAATGTGATCTGATT	48461848	True	NA	28	True	ATTAAA	-17	NA	48469368	48482314	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48469527_48470352_48470501_48470602_48470670_48472324_48472444_48473297_48473379_48473904_48474018_48474181_48474331_48474837_48474950_48478068_48478146_48478274_48478347_48478437_48478593_48479122
transcript_109176.known	chr19	+	1546	12	FSM	ENSG00000105443.16	ENST00000391881.7	1546	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	91.5287968956056	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTAATTATTTAACCACT	48461800	True	NA	NA	False	NA	NA	NA	48469320	48479365	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48469527_48470352_48470501_48470602_48470670_48472324_48472444_48473297_48473379_48473904_48474018_48474181_48474331_48474837_48474954_48478068_48478146_48478274_48478347_48478437_48478593_48479122
transcript_10918.nic	chr1	-	1218	3	ISM	ENSG00000122482.22	ENST00000370440.5	5702	6	-125	25181	-125	470	5prime_fragment	FALSE	canonical	3	86	junction_2	32	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCGAAAAATGGATGTAAGCA	-91021577	False	NA	NA	False	GATAAA	-42	NA	91021598	90940478	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_90941310_90982309_90982371_91021272
transcript_109190.known	chr19	+	5361	7	FSM	ENSG00000105447.13	ENST00000253237.10	5361	7	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_4	21.9974746025286	531	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCTCTGTTGCCCAGGC	48435969	True	NA	NA	False	NA	NA	NA	48445982	48457022	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48446193_48446384_48446503_48446680_48446844_48450312_48450527_48450665_48450809_48451033_48451232_48452707
transcript_109197.known	chr19	+	4606	12	FSM	ENSG00000105443.16	ENST00000427476.4	4606	12	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_8	91.5287968956056	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCAGAATGTGATCTGAT	48469196	False	NA	27	True	ATTAAA	-16	NA	48469207	48482313	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48469527_48470352_48470501_48470602_48470670_48472324_48472444_48473297_48473379_48473904_48474018_48474181_48474331_48474837_48474950_48478065_48478146_48478274_48478347_48478437_48478593_48479122
transcript_109198.nnic	chr19	+	785	5	NNC	ENSG00000088002.12	novel	1423	2	NA	NA	-1998	0	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_2	3.83242742918897	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGTTCCTTGATGCGCT	48589044	True	NA	6	True	AATAAA	-14	NA	48589102	48599423	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_48589196_48591608_48591736_48592721_48592817_48596738_48596920_48599134
transcript_109199.known	chr19	-	4112	7	FSM	ENSG00000105523.4	ENST00000263266.4	4112	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.80277563773199	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGCGTTACTAAAGACTGG	-48615062	False	777	0	True	AATAAA	-19	NA	48615076	48599960	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48601370_48603493_48603912_48609875_48610001_48610679_48610848_48612907_48614628_48614707_48614840_48614936
transcript_109202.known	chr19	-	1111	7	FSM	ENSG00000063177.13	ENST00000550973.5	1111	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_6	1961.24574923412	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCGAGGCTACAAAAACTA	-48619113	False	NA	-97	True	NA	NA	NA	48619127	48615392	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48615448_48615876_48615947_48616078_48616203_48616725_48616825_48617315_48617424_48617790_48617878_48618559
transcript_109203.known	chr19	-	628	7	FSM	ENSG00000063177.13	ENST00000549370.5	628	7	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_5	1862.01474662975	3254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACAGTGCTCTGTGTGTGT	-48416495	True	NA	-40	True	ATTAAA	-12	NA	48619176	48615335	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48615448_48615876_48615947_48616078_48616203_48616725_48616825_48617315_48617416_48617790_48617878_48619140
transcript_109204.known	chr19	-	559	6	FSM	ENSG00000063177.13	ENST00000552588.5	559	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2081.00885149487	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTCTGTGTGTGTTATTG	-48416500	True	NA	-35	True	ATTAAA	-17	NA	48619181	48615330	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48615448_48615876_48615947_48616078_48616203_48616725_48616825_48617315_48617424_48619140
transcript_109208.known	chr19	-	1036	6	FSM	ENSG00000063177.13	ENST00000549273.5	1036	6	0	0	0	0	multi-exon	FALSE	canonical	3	3823	junction_5	634.086240191348	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCTACTCTCTTATTAAAA	-48416496	True	NA	-70	True	NA	NA	NA	48619177	48615365	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48615947_48616078_48616203_48616725_48616825_48617315_48617424_48617790_48617878_48619140
transcript_109210.known	chr19	-	1645	5	FSM	ENSG00000063177.13	ENST00000552347.5	1645	5	0	0	0	0	multi-exon	FALSE	canonical	3	3823	junction_4	692.908904546622	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTGTGTTATTGGGG	-48416482	True	NA	-32	True	ATTAAA	-20	NA	48619163	48615327	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48615448_48615876_48615947_48616078_48617424_48617790_48617878_48619140
transcript_109213.known	chr19	-	2091	4	FSM	ENSG00000063177.13	ENST00000551749.5	2091	4	0	0	0	0	multi-exon	FALSE	canonical	3	3823	junction_3	788.970637391954	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTCTGTGTGTGTTATTG	-48416502	True	NA	-35	True	ATTAAA	-17	NA	48619183	48615330	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48615947_48616078_48617424_48617790_48617878_48619140
transcript_109216.known	chr19	-	3844	1	FSM	ENSG00000063177.13	ENST00000547892.1	3844	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTCTGTGTGTGTTATT	-48416494	True	NA	-36	True	ATTAAA	-16	NA	48619175	48615331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48615300_48619200
transcript_109220.known	chr19	+	2866	7	FSM	ENSG00000063176.16	ENST00000598088.5	2866	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	36.8634869032579	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTCTGCCCTTCCTCCA	48619144	True	NA	29	True	AATAAA	-23	NA	48619533	48630405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48619690_48620401_48620554_48625890_48626363_48627691_48627842_48627974_48628070_48628161_48628278_48628680
transcript_109222.known	chr19	+	2748	7	FSM	ENSG00000063176.16	ENST00000245222.9	2748	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	36.8634869032579	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTCTGCCCTTCCTCCA	48619116	True	NA	29	True	AATAAA	-23	NA	48619505	48630405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48619544_48620401_48620554_48625890_48626363_48627691_48627842_48627974_48628070_48628161_48628278_48628680
transcript_109223.known	chr19	+	2136	7	FSM	ENSG00000063176.16	ENST00000600537.5	2136	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	48.3804368176504	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGACGTGATGCTGGAAGG	48619243	True	NA	NA	False	NA	NA	NA	48619451	48629916	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48619544_48620401_48620554_48626067_48626363_48627691_48627842_48627974_48628070_48628161_48628278_48628680
transcript_109235.known	chr19	+	2492	6	FSM	ENSG00000063176.16	ENST00000340932.7	2492	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	47.9808295051263	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTCTGCCCTTCCTCCAT	48619222	False	NA	30	True	AATAAA	-24	NA	48619290	48630406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48619544_48620401_48620554_48627691_48627842_48627974_48628070_48628161_48628278_48628680
transcript_109244.nic	chr19	+	2685	6	NIC	ENSG00000063176.16	novel	1542	6	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	42.4857623210412	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTCTGCCCTTCCTCCA	48624276	False	NA	29	True	AATAAA	-23	NA	48624303	48630405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_48624431_48625890_48626363_48627691_48627842_48627974_48628070_48628161_48628278_48628680
transcript_109247.known	chr19	+	2683	6	FSM	ENSG00000063176.16	ENST00000599748.5	2683	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	33.0853441874193	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTCTGCCCTTCCTCCA	48624941	False	NA	29	True	AATAAA	-23	NA	48624951	48630405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48625077_48625890_48626363_48627691_48627842_48627974_48628070_48628161_48628278_48628680
transcript_109263.known	chr19	-	2170	4	FSM	ENSG00000105516.11	ENST00000222122.10	2170	4	0	0	0	0	multi-exon	TRUE	canonical	3	63	junction_2	14.8847423745107	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCGGCCCCAGATCAGACG	-48637367	False	193	NA	False	NA	NA	NA	48637379	48630029	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48631053_48633443_48633656_48635579_48635991_48636855
transcript_10927.nnic	chr1	+	3188	12	NNC	ENSG00000097046.13	novel	3215	12	NA	NA	-44	0	at_least_one_novel_splicesite	TRUE	canonical	3	35	junction_1	124.042781209742	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAGACTACTCATTTGAA	NA	False	NA	17	True	AATAAA	-22	NA	91500806	91525764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_91500878_91501653_91501832_91507853_91507938_91508261_91508398_91511596_91511691_91511780_91511924_91513057_91513308_91513947_91514044_91514818_91514998_91515793_91515877_91520129_91520280_91524040
transcript_109270.known	chr19	-	712	3	FSM	ENSG00000105516.11	ENST00000593500.1	712	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	45	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGACGTGATAATGCAGAT	-48634266	False	157	NA	False	NA	NA	NA	48634526	48630730	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48631053_48633443_48633656_48634348
transcript_109273.known	chr19	+	565	2	FSM	ENSG00000063176.16	ENST00000601704.1	565	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGTGAGGTGCTGGGCAG	48622577	True	NA	NA	False	NA	NA	NA	48624342	48626358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48624440_48625890
transcript_109279.known	chr19	-	1715	9	FSM	ENSG00000063180.9	ENST00000084798.9	1715	9	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_4	18.533331459832	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATCTTCCTCTTTCTAAA	-48641298	True	NA	-2	True	ATTAAA	-21	NA	48646187	48637945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48638145_48638887_48639054_48639304_48639460_48639548_48639622_48639787_48639884_48640094_48640281_48644426_48644570_48645402_48645478_48645565
transcript_109283.nnic	chr19	+	1981	2	NNC	ENSG00000232871.8	novel	477	4	NA	NA	-6743	-404	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAATTCCAGGGAAGACAG	48673313	True	NA	NA	False	NA	NA	NA	48673337	48681841	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_48673502_48680024
transcript_109284.known	chr19	+	1593	3	FSM	ENSG00000176920.13	ENST00000391876.5	1593	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	7	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCAGTAAATGTTTGCAG	48695600	True	NA	NA	False	NA	NA	NA	48696038	48705614	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48696080_48702954_48704209_48705316
transcript_109287.known	chr19	+	312	2	FSM	ENSG00000176920.13	ENST00000522283.1	312	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGATGGCCCTACGTTAT	48695594	True	NA	1	True	AATAAA	-13	NA	48696032	48696643	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48696080_48696378
transcript_10929.known	chr1	+	3215	12	FSM	ENSG00000097046.13	ENST00000234626.11	3215	12	0	0	0	0	multi-exon	FALSE	canonical	3	383	junction_1	40.4156094548048	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAGACTACTCATTTGAA	91493119	True	NA	17	True	AATAAA	-22	NA	91500850	91525764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_91500949_91501653_91501832_91507853_91507938_91508261_91508398_91511596_91511691_91511780_91511924_91513057_91513308_91513947_91514044_91514818_91514998_91515793_91515877_91520129_91520280_91524040
transcript_109291.known	chr19	-	3199	12	FSM	ENSG00000105538.10	ENST00000222145.9	3199	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	16.4286586928538	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCCTCGATTGTTAAGACT	-48740553	True	NA	-23	True	AATAAA	-20	NA	48740610	48720584	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48720998_48721853_48722002_48724336_48724510_48724716_48724961_48726784_48726889_48727006_48727159_48727392_48727431_48728936_48729591_48735195_48735552_48738959_48739646_48740145_48740287_48740520
transcript_109293.nnic	chr19	-	2396	10	NNC	ENSG00000105538.10	novel	3199	12	NA	NA	1139	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_9	12.6500866146452	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCCTCGATTGTTAAGACT	-48737552	False	NA	-23	True	AATAAA	-20	NA	48737566	48720584	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_48720998_48721853_48722002_48724336_48724510_48724716_48724961_48726784_48726889_48727006_48727159_48727392_48727431_48728936_48729591_48735195_48735552_48737452
transcript_109297.nnic	chr19	-	3464	3	NNC	ENSG00000174951.12	novel	3425	2	NA	NA	-363	-3	intron_retention	TRUE	canonical	0	0	junction_1	17.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCCGTGTCTCTGTAGCT	-48752806	True	NA	-5	True	ATTAAA	-13	NA	48753004	48748013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_48749184_48749504_48751284_48752489
transcript_109298.known	chr19	-	3425	2	FSM	ENSG00000174951.12	ENST00000645652.2	3425	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGTCTCTGTAGCTTTT	-48752270	True	NA	-2	True	ATTAAA	-16	NA	48752641	48748010	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48751284_48752489
transcript_109309.known	chr19	-	2041	12	FSM	ENSG00000105552.15	ENST00000402551.5	2041	12	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_11	87.28854023409	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGTCGGGCTTCTTCAG	-48810009	True	NA	-3	True	AATAAA	-15	NA	48811027	48795064	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48795465_48796427_48796503_48796577_48796719_48796936_48797023_48797190_48797334_48799674_48799839_48799980_48800101_48800186_48800298_48806516_48806718_48806999_48807075_48807755_48808237_48810983
transcript_109312.known	chr19	-	1579	11	FSM	ENSG00000105552.15	ENST00000597011.5	1579	11	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_10	60.4668504223595	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGTCTTTGCTGCAAT	-48810906	False	NA	-2	True	NA	NA	NA	48810916	48795109	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48795465_48796427_48796503_48796577_48796719_48796936_48797023_48797190_48797334_48799674_48799839_48799980_48800101_48800186_48800298_48806516_48806718_48806999_48807075_48810808
transcript_109322.known	chr19	-	1272	9	FSM	ENSG00000105552.15	ENST00000545387.6	1272	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_8	74.5398383416546	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCGGGCTTCTTCAGTGA	-48809994	True	NA	0	True	AATAAA	-18	NA	48811012	48795061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48795465_48796427_48796503_48796577_48796719_48796936_48797023_48797190_48797334_48799674_48799839_48799980_48800101_48800186_48800298_48810983
transcript_109329.known	chr19	-	1563	11	FSM	ENSG00000105552.15	ENST00000316273.11	1563	11	0	0	0	0	multi-exon	TRUE	canonical	3	105	junction_10	42.6765743704904	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTCGGGCTTCTTCAGT	-48810011	True	NA	-2	True	AATAAA	-16	NA	48811029	48795063	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48795465_48796427_48796503_48796577_48796719_48796936_48797023_48797190_48797334_48799674_48799839_48799980_48800101_48800186_48800298_48806516_48806718_48806999_48807075_48810983
transcript_109330.known	chr19	-	1050	9	FSM	ENSG00000087076.9	ENST00000263278.9	1050	9	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	18.2854963017141	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGGATATCGTTATAT	-48836076	True	NA	-5	True	CATAAA	-19	NA	48836491	48813017	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48813349_48813455_48813553_48813662_48813731_48815036_48815142_48831667_48831760_48832665_48832733_48834275_48834359_48835804_48835844_48836323
transcript_109332.nic	chr19	-	1200	8	NIC	ENSG00000087076.9	novel	1050	9	NA	NA	-231	-3	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	29.093094769469	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAGGAGGATATCGTTA	-48836730	False	NA	-8	True	CATAAA	-16	NA	48836741	48813020	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_48813349_48813662_48813731_48815036_48815142_48831667_48831760_48832665_48832733_48834275_48834359_48835804_48835844_48836323
transcript_109335.known	chr19	-	3073	20	FSM	ENSG00000105559.12	ENST00000263265.11	3073	20	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_12	15.7929820663634	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAATAGCTTTCTTTCTGT	-48867776	True	NA	-13	True	ATTAAA	-15	NA	48868617	48837096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48837552_48838016_48838130_48839204_48839264_48841148_48841311_48845369_48845447_48845516_48845617_48847899_48848041_48852227_48852327_48853681_48853832_48854006_48854088_48854216_48854265_48857421_48857497_48858859_48859140_48859468_48859685_48860349_48860460_48861400_48861502_48861619_48861693_48865502_48865611_48867536_48867627_48868082
transcript_10935.known	chr1	+	3313	12	FSM	ENSG00000097046.13	ENST00000428239.5	3313	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	129.005605618484	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAGACTACTCATTTGAA	91500793	True	NA	17	True	AATAAA	-22	NA	91501107	91525764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_91501304_91501653_91501832_91507853_91507938_91508261_91508398_91511596_91511691_91511780_91511924_91513057_91513308_91513947_91514044_91514818_91514998_91515793_91515877_91520129_91520280_91524040
transcript_109354.known	chr19	+	2350	3	FSM	ENSG00000087074.8	ENST00000200453.6	2350	3	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	15.5	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGCAGCGTCTGTATGTG	48870603	True	NA	13	True	AATAAA	-16	NA	48872420	48876058	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48872652_48873224_48874899_48875613
transcript_109358.nic	chr19	+	3111	2	ISM	ENSG00000087074.8	ENST00000200453.6	2350	3	-48	2	-48	-2	intron_retention	FALSE	canonical	3	194	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCGAGCAGCGTCTGTATG	48872351	False	NA	11	True	AATAAA	-14	NA	48872372	48876056	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_48872652_48873224
transcript_109360.nic	chr19	-	2218	9	ISM	ENSG00000104804.8	ENST00000221399.8	1763	13	2419	0	414	0	3prime_fragment	FALSE	canonical	0	0	junction_1	3.39116499156263	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTGTGCCTCCTCATTT	-48896168	True	NA	-3	True	AATAAA	-18	NA	48896325	48880966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_48881127_48882031_48882204_48883753_48883853_48883931_48884047_48885447_48885561_48887949_48888262_48889509_48889632_48894997_48895163_48895365
transcript_109361.nic	chr19	-	2350	6	NIC	ENSG00000104804.8	novel	1763	13	NA	NA	414	-2398	intron_retention	FALSE	canonical	2	6	junction_1	1.35646599662505	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTTGGCTATTTTTATG	-48896168	True	NA	NA	False	AATAAA	-39	NA	48896325	48883368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_48884047_48885447_48885561_48887949_48888262_48889509_48889632_48894997_48895163_48895365
transcript_109366.known	chr19	+	2406	13	FSM	ENSG00000104805.16	ENST00000405315.9	2406	13	0	0	0	0	multi-exon	FALSE	canonical	3	500	junction_1	71.2546294792291	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAGAGGCTCAATCCT	48886729	True	NA	116	True	NA	NA	NA	48900311	48923372	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48900373_48900785_48900932_48904346_48904455_48905752_48905886_48911148_48911253_48913010_48913197_48913473_48913565_48918725_48918785_48919029_48919123_48919193_48919287_48921153_48921325_48921826_48921933_48922317
transcript_109368.known	chr19	+	715	5	FSM	ENSG00000104808.8	ENST00000520557.1	715	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	5.3851648071345	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGTAGTGGTTTGGCAGA	48933519	False	NA	9	True	AATAAA	-20	NA	48933757	48944968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48933812_48934999_48935112_48939448_48939702_48944356_48944508_48944823
transcript_109370.known	chr19	+	776	5	FSM	ENSG00000104808.8	ENST00000522614.5	776	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	9.09670269933013	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCGTGGTAGTGGTTTG	48933466	True	NA	4	True	AATAAA	-15	NA	48933704	48944963	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48933812_48934999_48935112_48936031_48936196_48939448_48939702_48944823
transcript_109374.nnic	chr19	+	946	6	NNC	ENSG00000087088.21	novel	795	6	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	3	248	junction_5	1185.28352726257	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGCATCTGAGTCACTG	NA	False	NA	21	True	AATAAA	-17	NA	48954772	48961798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_48954963_48955547_48955600_48955686_48955834_48956197_48956334_48960809_48960915_48961482
transcript_109375.known	chr19	+	795	6	FSM	ENSG00000087088.21	ENST00000345358.12	795	6	0	0	0	0	multi-exon	FALSE	canonical	3	2539	junction_1	328.331174273781	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGCATCTGAGTCACTG	48917969	True	NA	21	True	AATAAA	-17	NA	48954874	48961798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48954963_48955547_48955600_48955686_48955834_48956197_48956334_48960809_48960915_48961531
transcript_109379.nic	chr19	+	819	6	NNC	ENSG00000087088.21	novel	795	6	NA	NA	-17	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	1530.0668743555	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGCATCTGAGTCACTG	48954773	False	NA	21	True	AATAAA	-17	NA	48954797	48961798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_48954963_48955686_48955714_48955714_48955834_48956197_48956334_48960809_48960915_48961531
transcript_109382.nnic	chr19	+	833	6	NNC	ENSG00000087088.21	novel	795	6	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	144	junction_1	1236.64132229196	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGCATCTGAGTCACTG	48917905	True	NA	21	True	AATAAA	-17	NA	48954810	48961798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_48954937_48955547_48955600_48955686_48955834_48956197_48956334_48960809_48960915_48961531
transcript_109387.known	chr19	+	1358	5	FSM	ENSG00000087088.21	ENST00000293288.12	1358	5	0	0	0	0	multi-exon	FALSE	canonical	3	2539	junction_1	358.049577572715	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGCATCTGAGTCACTG	48918023	True	NA	21	True	AATAAA	-17	NA	48954928	48961798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48954963_48955547_48955600_48955686_48955834_48956197_48956334_48960809
transcript_109390.known	chr19	+	433	5	FSM	ENSG00000087088.21	ENST00000354470.7	433	5	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_2	1247.1862330863	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCCAGCTGCCTTGGACT	48918023	True	NA	NA	False	NA	NA	NA	48954928	48961637	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48954963_48955547_48955600_48956197_48956334_48960809_48960915_48961531
transcript_109391.known	chr19	+	775	5	FSM	ENSG00000087088.21	ENST00000513545.5	775	5	0	0	0	0	multi-exon	FALSE	canonical	3	2539	junction_1	365.96789476674	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGCATTTTTCTTACTTT	48917991	True	NA	-64	True	CATAAA	-39	NA	48954896	48961713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48954963_48955547_48955834_48956197_48956334_48960809_48960915_48961531
transcript_109392.nic	chr19	+	1436	5	NNC	ENSG00000087088.21	novel	1358	5	NA	NA	-17	0	intron_retention	FALSE	non_canonical	0	0	junction_2	1628.9319161647	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGCATCTGAGTCACTG	48954773	False	NA	21	True	AATAAA	-17	NA	48954797	48961798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_48954963_48955686_48955714_48955714_48955834_48956197_48956334_48960809
transcript_109402.known	chr19	+	383	4	FSM	ENSG00000087088.21	ENST00000506183.5	383	4	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	1473.45467072003	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGCTGCCTTGGACTGT	48918023	True	NA	NA	False	NA	NA	NA	48954928	48961639	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48954963_48956197_48956334_48960809_48960915_48961531
transcript_109406.known	chr19	+	458	3	FSM	ENSG00000087088.21	ENST00000539787.2	458	3	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	1692.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATCCCCGATTCATCTAC	48918023	True	NA	NA	False	NA	NA	NA	48954928	48961097	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48954963_48956197_48956334_48960809
transcript_109408.known	chr19	+	687	6	NNC	ENSG00000087088.21	novel	677	7	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1590.60446371812	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTCGGCATCTGAGTCA	48918023	True	NA	18	True	AATAAA	-14	NA	48954928	48961795	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_48954965_48955686_48955714_48955714_48955834_48956197_48956334_48960809_48960915_48961531
transcript_109412.known	chr19	+	871	4	FSM	ENSG00000087086.15	ENST00000331825.11	871	4	0	0	0	0	multi-exon	FALSE	canonical	3	17539	junction_2	1174.50736717807	12146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTGGTTTTGTGTGTGG	48866682	True	NA	14	True	AATAAA	-14	NA	48965308	48966879	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48965610_48965769_48965917_48966280_48966407_48966582
transcript_109424.known	chr19	-	3569	16	FSM	ENSG00000104812.15	ENST00000323798.8	3569	16	0	0	0	0	multi-exon	TRUE	canonical	3	156	junction_10	22.4786318286698	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGGTGTGGTCAGACAT	-48990918	True	NA	-23	True	AATACA	-15	NA	48993309	48968129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48969612_48969774_48969856_48970545_48970710_48970927_48971024_48974212_48974340_48974619_48974734_48977923_48978003_48978097_48978158_48981529_48981637_48982254_48982376_48982719_48982838_48985460_48985606_48985849_48986036_48987193_48987386_48991301_48991484_48992994
transcript_109426.known	chr19	-	3378	15	FSM	ENSG00000104812.15	ENST00000263276.6	3378	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	56.116860575199	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGGTGTGGTCAGACAT	-48990919	True	NA	-23	True	AATACA	-15	NA	48993310	48968129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_48969612_48969774_48969856_48970545_48970710_48970927_48971024_48974212_48974340_48974619_48974734_48977923_48978003_48978097_48978158_48981529_48981637_48982254_48982376_48982719_48982838_48985460_48985606_48985849_48986036_48991301_48991484_48992994
transcript_109440.nnic	chr19	+	1662	16	NNC	ENSG00000183207.14	novel	1545	15	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	584.681679776839	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCCTGTGTATGTGTGG	48985332	True	NA	26	True	TATAAA	-18	NA	48993883	49015926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_48993924_48994775_48994934_48999318_48999374_49003278_49003335_49004276_49004419_49007017_49007148_49007301_49007369_49009775_49009883_49009972_49010067_49010487_49010612_49010998_49011094_49011191_49011311_49014483_49014604_49015020_49015151_49015571_49015687_49015816
transcript_109444.nic	chr19	+	1879	15	NIC	ENSG00000183207.14	novel	1545	15	NA	NA	-74	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	456.401703881704	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCCTGTGTATGTGTGG	48993472	True	NA	26	True	TATAAA	-18	NA	48993487	49015926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_48993903_48999318_48999374_49003278_49003335_49004276_49004419_49007017_49007148_49007301_49007369_49009775_49009883_49009972_49010067_49010487_49010612_49010998_49011094_49011191_49011311_49014483_49014604_49015020_49015151_49015571_49015687_49015816
transcript_109445.known	chr19	+	1563	15	FSM	ENSG00000183207.14	ENST00000596247.5	1563	15	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	482.066030916165	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTGTATGTGTGGTTG	48985346	True	NA	29	True	TATAAA	-21	NA	48993897	49015929	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48993924_48999318_48999374_49003278_49003335_49004206_49004419_49007017_49007148_49007301_49007369_49009775_49009883_49009972_49010067_49010487_49010612_49010998_49011094_49011191_49011311_49014483_49014604_49015020_49015151_49015571_49015687_49015816
transcript_109449.known	chr19	+	1545	15	FSM	ENSG00000183207.14	ENST00000595090.6	1545	15	0	0	0	0	multi-exon	FALSE	canonical	3	1164	junction_1	234.253275193273	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCAGAGTGCGGATTGAG	48985335	True	NA	12	True	NA	NA	NA	48993886	49015970	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48993924_48999318_48999374_49003278_49003335_49004276_49004419_49007017_49007148_49007301_49007369_49009775_49009883_49009972_49010067_49010487_49010612_49010998_49011094_49011191_49011311_49014483_49014604_49015020_49015151_49015571_49015687_49015816
transcript_10945.known	chr1	-	2908	17	FSM	ENSG00000069702.11	ENST00000465892.6	2908	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	5.12309415783079	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAACCCGGCCCAACCCAG	-91885675	False	NA	NA	False	NA	NA	NA	91886109	91683728	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_91683858_91695671_91695780_91698088_91698131_91708662_91708784_91712242_91712543_91716235_91716395_91716567_91716709_91719311_91719465_91719892_91720228_91721954_91722145_91727658_91727807_91729804_91729974_91734775_91734960_91758612_91758751_91797286_91797472_91861470_91861645_91885877
transcript_10946.nnic	chr1	-	4252	17	NIC	ENSG00000069702.11	novel	6339	17	NA	NA	-148	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	5.59016994374947	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	91886299	91682425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_91683858_91695671_91695780_91698088_91698131_91708662_91708784_91712242_91712543_91716235_91716395_91716567_91716709_91719311_91719465_91719892_91720231_91721954_91722145_91727658_91727807_91729804_91729974_91734775_91734960_91758612_91758751_91797286_91797472_91861470_91861645_91886029
transcript_109469.known	chr19	+	1478	15	FSM	ENSG00000183207.14	ENST00000221413.10	1478	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	483.333218390791	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCCTGTGTATGTGTGG	48985347	True	NA	26	True	TATAAA	-18	NA	48993898	49015926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48993924_48999318_48999374_49003278_49003335_49004276_49004419_49007017_49007148_49007301_49007369_49009775_49009872_49009972_49010067_49010487_49010612_49010998_49011094_49011191_49011311_49014483_49014604_49015020_49015151_49015571_49015687_49015816
transcript_109470.known	chr19	+	1853	13	FSM	ENSG00000183207.14	ENST00000594338.1	1853	13	0	0	0	0	multi-exon	FALSE	canonical	3	1495	junction_6	207.374644196333	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACTCTGTATAAAATGGT	48990767	False	NA	-6	True	NA	NA	NA	48999318	49015894	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_48999374_49003278_49003335_49004276_49004419_49007017_49007148_49007301_49007369_49009775_49009883_49009972_49010612_49010998_49011094_49011191_49011311_49014483_49014604_49015020_49015151_49015571_49015687_49015816
transcript_109472.known	chr19	-	2151	5	FSM	ENSG00000196337.13	ENST00000684222.1	2151	5	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_4	7.29297607290741	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCGGTGTCTTTCTGT	-49057735	False	88	NA	False	AATAAA	-17	NA	49057749	49054273	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49054606_49054840_49055009_49055360_49056596_49057120_49057249_49057461
transcript_109477.known	chr19	+	1757	11	FSM	ENSG00000104852.15	ENST00000601065.5	1757	11	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_8	597.503012544707	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGATAGTGGGCACCTCG	49064711	True	NA	15	True	AATAAA	-11	NA	49085418	49108598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49085637_49086404_49086562_49090290_49090354_49090465_49090521_49098426_49098492_49098641_49098705_49101389_49101472_49102113_49102174_49104633_49104736_49107624_49107713_49107794
transcript_109478.known	chr19	+	1673	11	FSM	ENSG00000104852.15	ENST00000595231.5	1673	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	638.056768634265	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGGCACCTCGGTTTCTT	49064787	True	NA	22	True	AATAAA	-18	NA	49085494	49108605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49085637_49086404_49086562_49090290_49090354_49090465_49090521_49098426_49098492_49098641_49098705_49101389_49101472_49102113_49102186_49104633_49104736_49107624_49107713_49107821
transcript_10948.known	chr1	+	1436	7	FSM	ENSG00000172031.7	ENST00000370383.5	1436	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	1.86338998124982	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGAGTAAGTGCTTCCA	92029962	True	NA	NA	False	AATATA	-21	NA	92029984	92063538	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_92030311_92032504_92032591_92042822_92042981_92045531_92045661_92050316_92050421_92052509_92052659_92063054
transcript_109482.known	chr19	+	1671	10	FSM	ENSG00000104852.15	ENST00000598441.6	1671	10	0	0	0	0	multi-exon	FALSE	canonical	3	1178	junction_9	144.113466955815	2252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGGGCACCTCGGTTTCT	49064743	True	NA	21	True	AATAAA	-17	NA	49085450	49108604	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49085637_49086404_49086562_49090290_49090354_49090465_49090521_49098426_49098492_49098641_49098705_49101389_49101472_49104633_49104736_49107624_49107713_49107794
transcript_109483.known	chr19	+	1603	10	FSM	ENSG00000104852.15	ENST00000221448.9	1603	10	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_9	345.563665499688	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCCCCTTGGATTTAAAA	49064743	True	NA	-2	True	NA	NA	NA	49085450	49108563	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49085637_49086404_49086562_49090290_49090354_49090465_49090521_49098426_49098492_49098641_49098705_49101389_49101472_49104633_49104736_49107624_49107713_49107821
transcript_109496.known	chr19	+	3144	11	FSM	ENSG00000104852.15	ENST00000401730.5	3144	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	599.121031178175	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTGGGCACCTCGGTTTC	49064743	True	NA	20	True	AATAAA	-16	NA	49085450	49108603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49085637_49086404_49086562_49090290_49090354_49090465_49090521_49098426_49098492_49098641_49098705_49101389_49101472_49102113_49103588_49104633_49104736_49107624_49107713_49107794
transcript_109497.known	chr19	+	746	6	FSM	ENSG00000104863.12	ENST00000221459.7	746	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	3.38230690505755	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGTGTCTGTGTGTCTGT	49114067	True	NA	9	True	TTTAAA	-16	NA	49114369	49118460	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49114442_49114848_49114968_49115259_49115332_49116262_49116473_49117854_49118019_49118351
transcript_109498.known	chr19	+	367	3	FSM	ENSG00000104863.12	ENST00000486217.2	367	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATACTAAGGCATCTTT	49114121	False	NA	NA	False	AGTAAA	-24	NA	49114423	49115489	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49114442_49114848_49114968_49115259
transcript_109499.known	chr19	-	742	1	FSM	ENSG00000221916.4	ENST00000408991.4	742	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCACGTGAACGTCCAGAT	-49118791	True	NA	-16	True	AATAAA	-35	NA	49119143	49118401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49118400_49119100
transcript_109502.nic	chr19	+	4401	27	ISM	ENSG00000177380.14	ENST00000334186.9	4583	30	8950	0	-86	0	3prime_fragment	FALSE	canonical	0	0	junction_19	15.2813844287477	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCTTGTTGACTGATTT	49128430	False	NA	22	True	NA	NA	NA	49128493	49151026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_49129013_49129379_49129455_49129992_49130068_49130377_49130600_49133000_49133148_49133236_49133372_49133795_49133880_49134033_49134166_49134638_49134702_49134835_49134916_49135778_49135924_49136723_49136912_49138204_49138428_49139667_49139832_49139960_49140089_49141419_49141514_49142033_49142116_49142803_49143005_49145942_49146006_49146165_49146193_49148082_49148259_49148665_49148764_49148992_49149169_49149256_49149326_49149546_49149719_49150079_49150152_49150235
transcript_109513.known	chr19	+	980	2	FSM	ENSG00000177380.14	ENST00000602783.1	980	2	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGCTTCCTTGTTGACT	49149448	True	NA	17	True	NA	NA	NA	49149957	49151021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49150152_49150235
transcript_109514.known	chr19	-	2357	6	FSM	ENSG00000130528.12	ENST00000252825.9	2357	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	4.02988833592198	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATTGTCAGACGTGGGG	-49155065	True	NA	-6	True	AATAAA	-15	NA	49155396	49151197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49151333_49151516_49151554_49152003_49152059_49152309_49152379_49153260_49153332_49153406
transcript_109516.known	chr19	+	4058	25	FSM	ENSG00000130529.16	ENST00000252826.10	4058	25	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_15	33.6501351739071	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGTCCGGAGGCTTGATT	49157205	True	NA	8	True	AATAAA	-16	NA	49157791	49211836	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49157891_49158191_49158260_49166040_49166216_49167916_49168098_49168259_49168424_49168552_49168737_49171356_49171419_49171577_49171770_49172008_49172109_49181348_49181462_49182577_49182923_49183077_49183213_49188640_49188771_49188945_49189092_49190207_49190321_49190695_49190774_49196439_49196875_49200299_49200433_49200610_49200786_49201963_49202142_49210208_49210406_49210709_49210843_49211014_49211088_49211163_49211270_49211493
transcript_109518.known	chr19	+	3444	24	FSM	ENSG00000130529.16	ENST00000427978.6	3444	24	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_16	35.2024659730822	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCCCAGAACCAGTCCCA	49157228	True	NA	NA	False	NA	NA	NA	49157814	49211680	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49157891_49158191_49158260_49166040_49166216_49167916_49168098_49168259_49168424_49168552_49168737_49171356_49171419_49171577_49171770_49172008_49172109_49181348_49181462_49182577_49182923_49183077_49183213_49188640_49188771_49188945_49189092_49190207_49190321_49190695_49190774_49200299_49200433_49200610_49200786_49201963_49202142_49210208_49210406_49210709_49210843_49211014_49211088_49211163_49211270_49211493
transcript_109522.nnic	chr19	+	4069	21	NNC	ENSG00000130529.16	novel	4058	25	NA	NA	-12	-2767	at_least_one_novel_splicesite	TRUE	canonical	3	7	junction_20	9.44933860119321	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATGATTGATATTCATAT	49157167	True	NA	6	True	AATAAA	-17	NA	49157753	49208633	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_49157891_49158191_49158260_49166040_49166216_49167916_49168098_49168259_49168424_49168552_49168737_49171356_49171419_49171577_49171770_49172008_49172109_49181348_49181462_49182577_49182923_49183077_49183213_49188640_49188771_49188945_49189092_49190207_49190321_49190695_49190774_49196439_49196875_49200299_49200433_49200610_49200786_49201963_49202142_49207808
transcript_109545.known	chr19	-	2191	13	FSM	ENSG00000074219.14	ENST00000598810.5	2191	13	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_12	128.980914824205	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGGGGATTTATTTGAGG	-49361449	False	5819	-4	True	GATAAA	-17	NA	49361495	49340594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355311_49355420_49355958_49355971_49357251_49357315_49359434_49359500_49359843_49360082_49361395
transcript_109549.known	chr19	-	2175	13	FSM	ENSG00000074219.14	ENST00000593945.6	2175	13	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_12	123.832183709334	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGGGGATTTATTTGAGG	-49356597	True	NA	-4	True	GATAAA	-17	NA	49362416	49340594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355311_49355420_49355958_49355971_49357251_49357315_49359434_49359500_49359843_49360082_49362332
transcript_109550.nic	chr19	-	2185	13	NIC	ENSG00000074219.14	novel	2175	13	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	116	junction_8	112.482189948256	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGGGGATTTATTTGAGG	-49362420	False	NA	-4	True	GATAAA	-17	NA	49362466	49340594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355311_49355420_49355958_49355971_49357251_49357315_49359434_49359500_49359843_49360082_49362372
transcript_109563.nnic	chr19	-	2146	13	NNC	ENSG00000074219.14	novel	2175	13	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_2	130.132197740947	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGGGGATTTATTTGAGG	-49362420	False	NA	-4	True	GATAAA	-17	NA	49362466	49340594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_49341438_49342437_49342591_49343269_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355311_49355420_49355958_49355971_49357251_49357315_49359434_49359500_49359843_49360082_49362372
transcript_109569.known	chr19	-	1444	12	FSM	ENSG00000074219.14	ENST00000539846.5	1444	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_11	139.500288811573	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGACAGATCACTCCGGA	-49356622	True	NA	NA	False	GATAAA	-33	NA	49362441	49341081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355302_49355420_49355958_49355971_49357251_49357315_49359434_49359500_49362372
transcript_109577.known	chr19	-	2167	12	FSM	ENSG00000074219.14	ENST00000601519.5	2167	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_11	127.820380169896	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGGGGATTTATTTGAGG	-49356588	True	NA	-4	True	GATAAA	-17	NA	49362407	49340594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355302_49355420_49357251_49357315_49359434_49359500_49359843_49360082_49362328
transcript_109578.known	chr19	-	2164	12	FSM	ENSG00000074219.14	ENST00000311227.6	2164	12	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_11	87.8732182143049	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGGGGATTTATTTGAGG	-49356638	True	NA	-4	True	GATAAA	-17	NA	49362457	49340594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355311_49355420_49357251_49357315_49359434_49359500_49359843_49360082_49362372
transcript_10958.known	chr1	-	2006	19	FSM	ENSG00000174842.17	ENST00000370360.8	2006	19	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_12	42.4179673088808	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATTTCTATAATGATACA	-92295723	True	NA	69	True	AATAAA	-19	NA	92298987	92246401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_92246647_92247061_92247145_92247877_92247990_92262862_92262927_92263622_92263733_92264553_92264639_92266418_92266493_92266699_92266742_92267912_92268003_92268104_92268136_92269722_92269777_92271464_92271653_92286489_92286593_92288913_92289152_92290197_92290307_92291417_92291538_92297403_92297530_92297960_92298030_92298924
transcript_109591.nnic	chr19	-	2134	12	NNC	ENSG00000074219.14	novel	2164	12	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_2	116.987178784686	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGGGGATTTATTTGAGG	-49362420	False	NA	-4	True	GATAAA	-17	NA	49362466	49340594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_49341438_49342437_49342591_49343269_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355311_49355420_49357251_49357315_49359434_49359500_49359843_49360082_49362372
transcript_109602.nnic	chr19	-	2065	11	NIC	ENSG00000074219.14	novel	2164	12	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	3	53	junction_7	119.624788401067	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGGGGATTTATTTGAGG	-49362420	False	NA	-4	True	GATAAA	-17	NA	49362466	49340594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49357251_49357315_49359434_49359500_49359843_49360082_49362372
transcript_109624.known	chr19	+	939	5	FSM	ENSG00000104901.7	ENST00000221498.7	939	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	4.20565096031518	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACACCATCTCCTTTCACT	49363714	True	NA	5	True	AATAAA	-19	NA	49363876	49375116	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49364009_49364581_49364755_49365508_49365650_49365792_49365886_49374716
transcript_109628.known	chr19	+	1849	4	FSM	ENSG00000261949.7	ENST00000610896.3	1849	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	10.1434160364686	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGACCCCTCCTCTGGCC	49425268	True	NA	4	True	AATAAA	-16	NA	49425387	49428987	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49425490_49426409_49427614_49427945_49428120_49428618
transcript_109629.known	chr19	-	2949	12	FSM	ENSG00000104888.10	ENST00000221485.8	2949	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	3.72838120989271	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTTGTTCTTGGCTGTGG	-49441508	False	98	-2	True	AATAAA	-18	NA	49441527	49429400	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49430813_49431014_49431143_49431337_49431449_49432518_49432652_49432810_49432961_49433725_49433869_49433959_49434047_49434601_49434690_49434767_49434883_49435167_49435287_49436548_49436802_49441317
transcript_109638.known	chr19	+	3099	17	FSM	ENSG00000161618.10	ENST00000293350.9	3099	17	0	0	0	0	multi-exon	TRUE	canonical	3	177	junction_7	25.0296698939479	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTTTGTCAATTTCCAT	49449905	True	NA	12	True	AATAAA	-18	NA	49453224	49471050	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49453422_49458485_49458589_49458959_49459087_49459669_49459849_49460821_49460900_49461618_49461801_49461883_49462037_49462569_49462756_49463853_49463950_49464126_49464264_49464416_49464523_49464631_49464763_49465737_49465906_49466081_49466284_49468380_49468567_49468863_49468987_49470305
transcript_109653.known	chr19	+	2470	16	FSM	ENSG00000161618.10	ENST00000455361.6	2470	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	61.705753378433	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGCTGTGCTTCTGCGAG	49449916	True	NA	-17	True	AATAAA	-14	NA	49453235	49470585	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49453422_49458485_49458589_49458959_49459087_49459669_49459849_49460821_49460900_49461618_49461801_49462569_49462756_49463853_49463950_49464126_49464264_49464416_49464523_49464631_49464763_49465737_49465906_49466081_49466284_49468380_49468567_49468863_49468987_49470305
transcript_109674.known	chr19	-	992	10	FSM	ENSG00000104872.11	ENST00000596049.5	992	10	0	0	0	0	multi-exon	FALSE	canonical	2	28	junction_9	302.166620702331	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCTTCTGAGATGTGGA	-49452720	True	NA	-78	True	NA	NA	NA	49453494	49446368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49446424_49446550_49446695_49447023_49447100_49447337_49447468_49447826_49447909_49448000_49448063_49449474_49449655_49450781_49450849_49451484_49451579_49453392
transcript_109679.known	chr19	+	1050	9	FSM	ENSG00000090554.13	ENST00000597551.6	1050	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4.27017271313468	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGCCAGGTCTGTCTA	49474176	True	NA	7	True	TATAAA	-17	NA	49474214	49486231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49474282_49474602_49474673_49475690_49475802_49476144_49476199_49476422_49476567_49478908_49479048_49480297_49480477_49480551_49480621_49486014
transcript_109688.known	chr19	-	1197	9	FSM	ENSG00000104872.11	ENST00000262265.10	1197	9	0	0	0	0	multi-exon	FALSE	canonical	3	734	junction_3	92.0258115965298	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTCTCTGACTGGGGAT	-49439863	True	NA	-7	True	AATAAA	-16	NA	49451814	49446297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49446424_49446550_49446695_49447023_49447100_49447337_49447468_49447826_49447909_49448000_49448063_49449474_49449655_49450781_49450849_49451484
transcript_109689.known	chr19	+	660	8	FSM	ENSG00000142541.18	ENST00000467825.2	660	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	6216.46053241074	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCCTGCCCTTCCTCCA	49222962	True	NA	5	True	AATAAA	-19	NA	49487633	49491843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49487645_49489849_49489923_49490231_49490298_49490474_49490601_49490778_49490865_49491039_49491100_49491424_49491548_49491728
transcript_10969.nic	chr1	-	427	3	ISM	ENSG00000174842.17	ENST00000495106.5	1833	18	-33	50778	-33	253	5prime_fragment	FALSE	canonical	3	303	junction_2	16.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTAGAAATATTTAGGCC	NA	False	NA	NA	False	AAAACA	-7	NA	92299020	92297267	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_92297530_92297960_92298030_92298924
transcript_109690.known	chr19	+	2312	3	FSM	ENSG00000142541.18	ENST00000488946.1	2312	3	0	0	0	0	multi-exon	FALSE	canonical	3	11745	junction_1	3770	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGGCGTCTTTGCACT	49222936	True	NA	13	True	AATAAA	-13	NA	49487607	49492305	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49487645_49489849_49491548_49491728
transcript_109691.known	chr19	+	850	7	FSM	ENSG00000142541.18	ENST00000479992.5	850	7	0	0	0	0	multi-exon	FALSE	canonical	3	11745	junction_1	2598.50667050648	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTTGCCCTGGAATGTA	49222943	True	NA	23	True	AATAAA	-37	NA	49487614	49491861	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49487645_49489849_49489923_49490231_49490577_49490778_49490865_49491039_49491100_49491424_49491548_49491728
transcript_109695.known	chr19	+	430	5	FSM	ENSG00000142534.7	ENST00000599561.1	430	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3702.83462363633	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGACTTGGGATCTTCC	49438945	True	NA	39	True	AATAAA	-19	NA	49496453	49499689	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49496472_49497193_49497283_49497580_49497596_49497916_49498047_49499511
transcript_109696.known	chr19	+	573	5	FSM	ENSG00000142534.7	ENST00000270625.7	573	5	0	0	0	0	multi-exon	FALSE	canonical	3	5356	junction_1	1515.85635863033	3029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCGCCTTTACCAGAGCATT	49438925	True	NA	58	True	AATAAA	-38	NA	49496433	49499708	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49496472_49497193_49497326_49497519_49497596_49497916_49498047_49499511
transcript_109699.known	chr19	+	751	4	FSM	ENSG00000142534.7	ENST00000602252.5	751	4	0	0	0	0	multi-exon	FALSE	canonical	3	5356	junction_1	1738.3533076513	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGACTTGGGATCTTCC	49438922	True	NA	39	True	AATAAA	-19	NA	49496430	49499689	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49496472_49497193_49497596_49497916_49498047_49499511
transcript_10970.known	chr1	-	572	2	FSM	ENSG00000174842.17	ENST00000487911.1	572	2	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGCAAGACTTTAAAGA	-92295723	True	NA	NA	False	NA	NA	NA	92298987	92297520	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_92298030_92298924
transcript_109701.known	chr19	+	1133	3	FSM	ENSG00000142534.7	ENST00000599167.5	1133	3	0	0	0	0	multi-exon	FALSE	canonical	3	5356	junction_1	1802.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGACTTGGGATCTTCC	49496266	False	NA	39	True	AATAAA	-19	NA	49496369	49499689	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49496472_49497193_49498047_49499511
transcript_109704.known	chr19	+	547	5	FSM	ENSG00000142534.7	ENST00000601306.1	547	5	0	0	0	0	multi-exon	FALSE	canonical	1	92	junction_1	3772.09179368689	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAGACTTGGGATCTTC	49438957	True	NA	38	True	AATAAA	-18	NA	49496465	49499688	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49496498_49497193_49497326_49497519_49497596_49497916_49498047_49499511
transcript_109714.nic	chr19	+	2313	6	NIC	ENSG00000104870.13	novel	1511	7	NA	NA	69	0	intron_retention	FALSE	canonical	3	11	junction_1	66.9973133789706	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGTTCTCATCATTT	49512419	False	NA	28	True	AATATA	-20	NA	49512443	49526333	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_49512751_49513386_49513474_49513881_49514134_49514210_49514487_49524506_49525574_49526009
transcript_109719.nic	chr19	+	2264	5	NIC	ENSG00000104870.13	novel	1511	7	NA	NA	31	0	intron_retention	FALSE	canonical	3	8	junction_1	74.342114578481	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGTTCTCATCATTT	49512381	False	NA	28	True	AATATA	-20	NA	49512405	49526333	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_49512751_49513881_49514134_49514210_49514487_49524506_49525574_49526009
transcript_109727.nic	chr19	+	1660	3	NIC	ENSG00000104870.13	novel	1559	6	NA	NA	8	0	intron_retention	FALSE	canonical	3	12	junction_1	103	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGTTCTCATCATTT	49512807	False	NA	28	True	AATATA	-20	NA	49513204	49526333	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_49513474_49524506_49525574_49526009
transcript_109730.known	chr19	+	2681	3	FSM	ENSG00000104870.13	ENST00000595881.1	2681	3	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	55	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGTGTGTTCTCATCAT	49512797	False	NA	26	True	AATATA	-18	NA	49513194	49526331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49514487_49524506_49525574_49526009
transcript_109732.known	chr19	+	1469	7	FSM	ENSG00000142552.8	ENST00000270645.8	1469	7	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	11.7709623886731	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGTGTGTCTGTCTGTTG	49526849	True	NA	14	True	AATAAA	-15	NA	49528002	49543633	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49528059_49528466_49528715_49534192_49534396_49537032_49537206_49539118_49539180_49542552_49542753_49543105
transcript_109739.nnic	chr19	-	1132	10	NNC	ENSG00000142546.14	novel	1000	9	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_9	252.523608479497	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACGTGGCGCCTTCATTCG	-49574861	True	NA	-2	True	AATAAA	-18	NA	49580580	49555710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_49555823_49556316_49556426_49556548_49556737_49556874_49556994_49557089_49557250_49558896_49558979_49559933_49560040_49560621_49560693_49576758_49576878_49580514
transcript_10974.known	chr1	+	16899	13	FSM	ENSG00000122484.9	ENST00000610020.2	16899	13	0	0	0	0	multi-exon	TRUE	canonical	3	51	junction_6	14.0524809988209	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCCCAATTCTATTTTC	92297052	True	NA	2	True	AATAAA	-16	NA	92299058	92402056	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_92299147_92300193_92300240_92301475_92301591_92303976_92304076_92304283_92304350_92307187_92307277_92320598_92320635_92323444_92324376_92333390_92333474_92336346_92336428_92345845_92345915_92380723_92380874_92387010
transcript_109744.known	chr19	-	1000	9	FSM	ENSG00000142546.14	ENST00000339093.7	1000	9	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	197.393483935007	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACGTGGCGCCTTCATTCG	-49574839	True	NA	-2	True	AATAAA	-18	NA	49580558	49555710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49555823_49556316_49556426_49556548_49556737_49556874_49556994_49557080_49557250_49558896_49558979_49559933_49560040_49560621_49560693_49580514
transcript_109752.known	chr19	+	1403	7	FSM	ENSG00000126460.11	ENST00000246794.10	1403	7	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_1	3.07769755210323	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGGGCGCATCGGAACTG	49581305	False	NA	9	True	AAAAAG	-40	NA	49581315	49591004	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49581482_49583206_49583305_49583541_49583718_49583912_49583953_49588496_49588633_49589899_49590053_49590370
transcript_109761.known	chr19	-	933	3	FSM	ENSG00000142546.14	ENST00000593345.1	933	3	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_2	66.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTACTAGATTCTGCCCCA	-49574828	True	NA	NA	False	NA	NA	NA	49580547	49559210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49560040_49560621_49560693_49580514
transcript_109762.known	chr19	-	602	7	FSM	ENSG00000142546.14	ENST00000594932.5	602	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	246.501352261335	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGACCCGCGACAGCCTGA	-49574813	True	NA	NA	False	GGGGCT	-31	NA	49580532	49556602	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49556654_49556874_49556994_49557089_49557250_49558896_49558974_49559933_49560040_49560621_49560693_49580514
transcript_109774.known	chr19	-	986	6	FSM	ENSG00000126458.4	ENST00000246792.4	986	6	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_2	26.0415053328336	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGTGCTTTCTAAAAAGG	-49638942	True	NA	-22	True	AATAAA	-18	NA	49640143	49635291	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49635661_49635733_49635853_49636618_49636728_49636823_49636927_49637042_49637131_49639945
transcript_109776.known	chr19	+	4222	11	FSM	ENSG00000126461.15	ENST00000360565.8	4222	11	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	48.2136910016232	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGAGCCCCATGGTTCT	49635443	True	NA	18	True	ATTAAA	-18	NA	49642208	49658642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49642243_49645020_49645135_49645353_49645412_49646107_49646203_49646525_49646627_49646714_49646831_49650867_49653706_49654348_49654432_49654651_49654871_49657760_49657890_49658207
transcript_10978.nic	chr1	+	792	8	ISM	ENSG00000122484.9	ENST00000610020.2	16899	13	-41	78400	-41	-428	5prime_fragment	FALSE	canonical	3	51	junction_6	15.7816736910188	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCATAATGAAAAAGAAAGCT	92297011	True	NA	NA	False	NA	NA	NA	92299017	92323656	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_92299147_92300193_92300240_92301475_92301591_92303976_92304076_92304283_92304350_92307187_92307277_92320598_92320635_92323444
transcript_109781.known	chr19	-	1468	8	FSM	ENSG00000126456.16	ENST00000598808.5	1468	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_7	182.418558848174	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGCCTCCAACCCCCCTG	-49659642	True	NA	-93	True	NA	NA	NA	49665842	49659631	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664552_49664674_49665630
transcript_109786.known	chr19	-	1741	8	FSM	ENSG00000126456.16	ENST00000597198.5	1741	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_7	152.067519912192	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCACTTGTGCGTGTCTGGT	-49665842	False	NA	-34	True	AATAAA	-16	NA	49665857	49659572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664673_49664847_49665483
transcript_109787.known	chr19	-	1556	8	FSM	ENSG00000126456.16	ENST00000601291.5	1556	8	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	153.398374256345	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTTGTGCGTGTCTGGTG	-49659602	True	NA	-33	True	AATAAA	-17	NA	49665802	49659571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49659834_49660712_49660845_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664673_49664847_49665630
transcript_109788.nic	chr19	-	1549	8	NIC	ENSG00000126456.16	novel	1595	8	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_7	134.901475763853	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCACTTGTGCGTGTCTG	-49665840	False	NA	-36	True	AATAAA	-14	NA	49665855	49659574	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664673_49664847_49665671
transcript_109793.known	chr19	+	1064	7	FSM	ENSG00000126453.10	ENST00000246784.8	1064	7	0	0	0	0	multi-exon	FALSE	canonical	3	779	junction_2	150.056655967005	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATTGTCTGTTCTTACA	49650841	True	NA	29	True	AATAAA	-39	NA	49665932	49673916	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49666068_49666684_49666800_49667018_49667162_49668850_49668938_49669023_49669116_49670215_49670489_49673697
transcript_109796.known	chr19	-	1494	8	FSM	ENSG00000126456.16	ENST00000593922.5	1494	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_7	186.161987833945	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGATCACTTGTGCGTG	-49665690	False	NA	-40	True	AATAAA	-10	NA	49665705	49659578	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664442_49664674_49665630
transcript_109797.known	chr19	-	1442	7	FSM	ENSG00000126456.16	ENST00000377135.8	1442	7	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_6	153.880906331271	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTGCGTGTCTGGTGTT	-49665860	False	NA	-31	True	AATAAA	-19	NA	49665875	49659569	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49665630
transcript_109804.known	chr19	-	1055	7	FSM	ENSG00000126456.16	ENST00000599223.5	1055	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	171.975450444404	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGATCACTTGTGCGTG	-49665690	False	NA	-40	True	AATAAA	-10	NA	49665705	49659578	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49659834_49660712_49660829_49662424_49662618_49663187_49663259_49663342_49663515_49664673_49664847_49665630
transcript_109808.nic	chr19	+	790	6	NIC	ENSG00000126453.10	novel	1431	7	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	87	junction_5	381.359882525679	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATTGTCTGTTCTTACA	49650842	True	NA	29	True	AATAAA	-39	NA	49665933	49673916	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_49666068_49666684_49666800_49667018_49667162_49668850_49668938_49669023_49669116_49673697
transcript_109810.known	chr19	+	893	6	FSM	ENSG00000126453.10	ENST00000598979.5	893	6	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_2	324.58157680312	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATTGTCTGTTCTTACA	49650869	True	NA	29	True	AATAAA	-39	NA	49665960	49673916	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49666068_49666684_49666800_49668850_49668938_49669023_49669116_49670215_49670489_49673697
transcript_109814.known	chr19	-	1117	6	FSM	ENSG00000126456.16	ENST00000599144.5	1117	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	177.720454647179	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGATCACTTGTGCGTG	-49665716	False	NA	-40	True	AATAAA	-10	NA	49665731	49659578	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49665630
transcript_109818.known	chr19	+	620	5	FSM	ENSG00000126453.10	ENST00000594157.5	620	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_4	478.772584323706	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATTGTCTGTTCTTACA	49650869	True	NA	29	True	AATAAA	-39	NA	49665960	49673916	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49666068_49666684_49666800_49668850_49668938_49669023_49669116_49673697
transcript_109824.known	chr19	+	1259	3	FSM	ENSG00000126453.10	ENST00000611631.4	1259	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	556	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAATTGTCTGTTCTTAC	49665073	False	NA	28	True	AATAAA	-38	NA	49665141	49673915	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49666068_49666684_49666800_49673697
transcript_10985.nic	chr1	-	1480	10	ISM	ENSG00000067208.16	ENST00000684568.2	7795	20	0	168494	0	26668	5prime_fragment	FALSE	canonical	3	27	junction_7	7.9021797274198	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CGAAAGAAATGGAAGAGCAA	-92782396	True	NA	NA	False	AATAAA	-3	NA	92785108	92677189	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_92677219_92693801_92693900_92694298_92694389_92695309_92695454_92697859_92697986_92702140_92702216_92703394_92703620_92704554_92704745_92736397_92736628_92784835
transcript_109863.known	chr19	+	1686	11	FSM	ENSG00000126457.22	ENST00000532489.5	1686	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	1916.40330828351	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGGCTTTGTTTCCTGGG	49675703	False	NA	27	True	AATAAA	-13	NA	49675896	49688447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49676261_49676345_49676440_49680486_49680589_49681909_49682066_49682195_49682260_49683926_49684070_49684753_49684842_49684921_49685038_49686092_49686244_49686604_49686727_49688161
transcript_109872.known	chr19	+	1328	11	FSM	ENSG00000126457.22	ENST00000454376.7	1328	11	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_2	1809.36580325815	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGGCTTTGTTTCCTGGG	49613080	True	NA	27	True	AATAAA	-13	NA	49677270	49688447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49677317_49679871_49679926_49680486_49680589_49681909_49682066_49682195_49682260_49683926_49684070_49684753_49684842_49684921_49685038_49686092_49686244_49686604_49686727_49688161
transcript_10988.nic	chr1	-	1451	9	ISM	ENSG00000067208.16	ENST00000684568.2	7795	20	0	185106	0	10056	5prime_fragment	FALSE	canonical	3	27	junction_6	8.22249201884684	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTATTTTATATTTTTG	-92782396	True	NA	NA	False	AATACA	-20	NA	92785108	92693801	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_92693900_92694298_92694389_92695309_92695454_92697859_92697986_92702140_92702216_92703394_92703620_92704554_92704745_92736397_92736628_92784835
transcript_109887.known	chr19	+	1393	10	FSM	ENSG00000126457.22	ENST00000391851.8	1393	10	0	0	0	0	multi-exon	FALSE	canonical	3	4049	junction_1	318.550226673252	5093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGGCTTTGTTTCCTGGG	49677062	False	NA	27	True	AATAAA	-13	NA	49677151	49688447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49677317_49680486_49680589_49681909_49682066_49682195_49682260_49683926_49684070_49684753_49684842_49684921_49685038_49686092_49686244_49686604_49686727_49688161
transcript_10990.known	chr1	-	2536	5	FSM	ENSG00000154511.12	ENST00000370310.5	2536	5	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	1.92028643696715	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCACTGATGGTTGGTC	-92960765	True	NA	-10	True	AATAAA	-16	NA	92961462	92842166	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_92844196_92847182_92847360_92850847_92850956_92876295_92876431_92961375
transcript_109919.known	chr19	+	1192	8	FSM	ENSG00000126457.22	ENST00000610806.4	1192	8	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_5	1704.4433048922	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTTGTTTCCTGGGGGC	49677062	False	NA	30	True	AATAAA	-16	NA	49677151	49688450	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49677317_49680486_49680589_49681909_49682066_49682195_49682260_49683926_49684070_49686092_49686244_49686604_49686727_49688161
transcript_109922.known	chr19	+	915	7	FSM	ENSG00000126457.22	ENST00000534676.5	915	7	0	0	0	0	multi-exon	FALSE	canonical	3	4049	junction_1	374.532894268166	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCGCTGCTGTGTGAGAA	49613058	True	NA	NA	False	TTTAAA	-9	NA	49677248	49685215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49677317_49680486_49680589_49681909_49682066_49682195_49682260_49683926_49684070_49684753_49684842_49684921
transcript_109936.known	chr19	+	2846	20	FSM	ENSG00000169169.15	ENST00000598293.6	2846	20	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	51.3381597663906	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTCTGCTATGCT	49686198	True	NA	21	True	AATAAA	-16	NA	49691115	49713731	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49691341_49691820_49691890_49692238_49692394_49697325_49697466_49700683_49700856_49701316_49701419_49701496_49701635_49704709_49704788_49705006_49705115_49705213_49705299_49705908_49706105_49706230_49706414_49707517_49707624_49708722_49708840_49710319_49710485_49710722_49710858_49711808_49711962_49712735_49712850_49712971_49713065_49713419
transcript_109940.known	chr19	+	2785	20	FSM	ENSG00000169169.15	ENST00000405931.6	2785	20	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_8	73.6492774335363	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTCTGCTATGCT	49686226	True	NA	21	True	AATAAA	-16	NA	49691143	49713731	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49691341_49691820_49691890_49692238_49692394_49697325_49697466_49700683_49700856_49701316_49701419_49701496_49701635_49704709_49704788_49705039_49705115_49705213_49705299_49705908_49706105_49706230_49706414_49707517_49707624_49708722_49708840_49710319_49710485_49710722_49710858_49711808_49711962_49712735_49712850_49712971_49713065_49713419
transcript_109949.known	chr19	+	2783	19	FSM	ENSG00000169169.15	ENST00000323446.9	2783	19	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	55.0860157916914	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTCTGCTATGCT	49686192	True	NA	21	True	AATAAA	-16	NA	49691109	49713731	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49691341_49692238_49692394_49697325_49697466_49700683_49700856_49701316_49701419_49701496_49701635_49704709_49704788_49705006_49705115_49705213_49705299_49705908_49706105_49706230_49706414_49707517_49707624_49708722_49708840_49710319_49710485_49710722_49710858_49711808_49711962_49712735_49712850_49712971_49713065_49713419
transcript_109977.known	chr19	-	1854	11	FSM	ENSG00000126467.11	ENST00000246801.8	1854	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2.72213151776324	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGAATTCTGTCTGCTTT	-49763240	False	NA	-5	True	AATAAA	-16	NA	49763306	49739759	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49739933_49740058_49740184_49741884_49742021_49744230_49744405_49745201_49745397_49746469_49746799_49747388_49747473_49748084_49748169_49748373_49748470_49762003_49762233_49763077
transcript_10998.known	chr1	+	1028	8	FSM	ENSG00000122406.14	ENST00000370321.8	1028	8	0	0	0	0	multi-exon	FALSE	canonical	3	5844	junction_6	569.066869568785	3192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTGTTAAGCTCTTAT	92746576	True	NA	35	True	AATAAA	-18	NA	92832039	92841924	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_92832118_92833388_92833459_92833544_92833661_92834778_92834914_92836189_92836393_92837455_92837634_92840550_92840640_92841765
transcript_109980.known	chr19	+	3286	24	FSM	ENSG00000196961.13	ENST00000359032.9	3286	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	157.683898100684	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCCCCATGTCTGTGTC	49759743	False	NA	5	True	AATAAA	-13	NA	49767133	49807110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49767201_49781756_49781826_49781946_49782090_49782530_49782725_49791934_49792065_49792990_49793093_49795629_49795739_49798801_49798953_49799326_49799496_49799628_49799767_49799967_49800151_49800960_49801059_49801389_49801622_49801721_49801890_49801980_49802142_49802533_49802600_49802948_49803006_49803106_49803190_49803286_49803377_49805452_49805577_49805660_49805778_49805871_49805942_49806118_49806254_49806680
transcript_109984.known	chr19	+	3357	23	FSM	ENSG00000196961.13	ENST00000354293.10	3357	23	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_18	123.128804425848	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCATGTCTGTGTCCATC	49759610	True	NA	9	True	AATAAA	-17	NA	49767000	49807114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49767201_49781756_49781826_49781946_49782090_49782530_49782725_49791934_49792065_49792990_49793093_49795629_49795739_49798801_49798953_49799326_49799496_49799628_49799767_49799967_49800151_49800960_49801059_49801389_49801622_49801721_49801890_49801980_49802142_49802948_49803006_49803106_49803190_49803286_49803377_49805452_49805577_49805660_49805778_49805871_49805942_49806118_49806254_49806680
transcript_11.known	ERCC-00035	+	1114	1	FSM	ERCC-00035A	DQ459413	1114	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00035_+_0_1100
transcript_11002.nic	chr1	+	924	7	ISM	ENSG00000122406.14	ENST00000370321.8	1028	8	-85	1315	-58	3	5prime_fragment	FALSE	canonical	3	5844	junction_6	347.633147952774	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGCCCAAGAAAGAAGTTA	NA	False	NA	NA	False	AAGAAA	-39	NA	92831954	92840609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_92832118_92833388_92833459_92833544_92833661_92834778_92834914_92836189_92836393_92837455_92837634_92840550
transcript_110024.nic	chr19	-	1907	11	NIC	ENSG00000010361.14	novel	1728	11	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_9	59.390571642307	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGTGTCTTCTCTGTCA	-49810707	True	NA	0	True	AATAAA	-41	NA	49813303	49806865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812250_49812336_49812446_49812737_49812995
transcript_110026.known	chr19	-	1728	11	FSM	ENSG00000010361.14	ENST00000313777.9	1728	11	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_9	37.4112282610448	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGTGTCTTCTCTGTCA	-49810696	True	NA	0	True	AATAAA	-41	NA	49813292	49806865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812250_49812336_49812614_49812737_49812995
transcript_110027.known	chr19	-	1524	11	FSM	ENSG00000010361.14	ENST00000533418.5	1524	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_10	68.855210405604	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGTCCCAGGCATCCCC	-49810653	True	NA	-24	True	AATAAA	-17	NA	49813249	49806889	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812250_49812336_49812614_49812737_49813132
transcript_110028.known	chr19	-	1632	11	FSM	ENSG00000010361.14	ENST00000377092.8	1632	11	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_9	64.6285540608793	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAACAAAAATAAAAATACA	-49810677	True	NA	-54	True	NA	NA	NA	49813273	49806919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812250_49812336_49812637_49812737_49812995
transcript_110039.known	chr19	-	1483	10	FSM	ENSG00000010361.14	ENST00000525370.5	1483	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	88.7306925616449	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAAAGTCCCAGGCATC	-49810560	True	NA	-27	True	AATAAA	-14	NA	49813156	49806892	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49807375_49808413_49808492_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812614_49812737_49812995
transcript_110041.known	chr19	-	1479	10	FSM	ENSG00000010361.14	ENST00000528094.5	1479	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_8	67.5224699682801	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGTCCCAGGCATCCCC	-49810579	True	NA	-24	True	AATAAA	-17	NA	49813175	49806889	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812637_49812737_49812995
transcript_11006.known	chr1	+	896	7	FSM	ENSG00000122406.14	ENST00000645300.1	896	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	2478.99269977859	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTCAGGAGCGGGCTGC	92746549	True	NA	-15	True	NA	NA	NA	92832012	92841835	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_92832118_92833544_92833661_92834778_92834914_92836189_92836393_92837455_92837634_92840550_92840640_92841765
transcript_11008.nic	chr1	+	799	6	ISM	ENSG00000122406.14	ENST00000370321.8	1028	8	-85	4357	-58	98	5prime_fragment	FALSE	canonical	3	5946	junction_4	316.316044487155	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGATGAAGATGCTTACAA	NA	False	NA	10	True	NA	NA	NA	92831954	92837567	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_92832118_92833388_92833459_92833544_92833661_92834778_92834914_92836189_92836393_92837455
transcript_110083.known	chr19	+	2332	18	FSM	ENSG00000104973.19	ENST00000312865.10	2332	18	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_7	25.1605227114658	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCGGCTCCCGTCACTG	49812004	True	NA	17	True	AATAAA	-17	NA	49818288	49836979	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49818476_49818570_49818617_49819171_49819297_49828448_49828548_49828969_49829091_49829785_49829949_49830087_49830219_49830510_49830599_49830693_49830888_49831332_49831462_49831935_49832022_49832099_49832158_49832307_49832416_49834985_49835178_49835533_49835606_49835726_49835946_49836225_49836407_49836846
transcript_110084.known	chr19	+	4003	18	FSM	ENSG00000104973.19	ENST00000593767.3	4003	18	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_17	61.3403912492895	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGGCCGTCGACTTTT	49812004	True	NA	3	True	AGTAAA	-17	NA	49818288	49840383	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49818476_49818570_49818617_49819171_49819297_49828448_49828548_49828969_49829091_49829785_49829949_49830087_49830219_49830510_49830599_49830693_49830888_49831332_49831462_49831935_49832022_49832099_49832158_49832307_49832416_49834985_49835178_49835533_49835606_49835726_49835946_49836225_49836407_49838579
transcript_11009.known	chr1	+	629	6	FSM	ENSG00000122406.14	ENST00000645119.1	629	6	0	0	0	0	multi-exon	FALSE	canonical	2	27	junction_4	2699.49236709423	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGTGTTAAGCTCTTA	92746593	True	NA	34	True	AATAAA	-17	NA	92832056	92841923	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_92832118_92833388_92833459_92833544_92833661_92834778_92834914_92840550_92840640_92841765
transcript_110100.known	chr19	+	2370	18	NNC	ENSG00000104946.14	novel	2095	17	NA	NA	-241	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	108.766916911958	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGGCTTCTTGTTGGTGG	49877414	False	NA	19	True	ATTAAA	-19	NA	49877424	49888749	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_49877745_49878142_49878242_49878497_49878573_49880278_49880403_49881267_49881476_49882040_49882153_49882241_49882401_49882763_49882893_49882972_49883077_49883650_49883746_49884252_49884370_49884458_49884560_49884658_49884759_49887475_49887574_49887717_49887821_49888012_49888026_49888230_49888318_49888423
transcript_110123.nic	chr19	+	2391	17	NIC	ENSG00000104946.14	novel	2095	17	NA	NA	-193	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_15	74.900115779283	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCAGTTGGCTTCTTGT	49877462	False	NA	13	True	ATTAAA	-13	NA	49877472	49888743	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_49877745_49878142_49878242_49878497_49878573_49880278_49880403_49881267_49881476_49882040_49882153_49882241_49882401_49882763_49882893_49882972_49883077_49883650_49883746_49884252_49884370_49884458_49884560_49884658_49884759_49887475_49887574_49887717_49887835_49888156_49888318_49888423
transcript_110124.known	chr19	+	2095	17	FSM	ENSG00000104946.14	ENST00000221543.10	2095	17	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_1	41.0257160205645	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGCTTCTTGTTGGTGGG	49874629	True	NA	20	True	ATTAAA	-20	NA	49877701	49888750	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49877745_49878142_49878242_49878497_49878573_49880278_49880403_49881267_49881476_49882040_49882153_49882241_49882401_49882763_49882893_49882972_49883077_49883650_49883746_49884252_49884370_49884458_49884560_49884658_49884759_49887475_49887574_49887717_49887835_49888230_49888318_49888423
transcript_110145.known	chr19	-	1731	17	FSM	ENSG00000039650.12	ENST00000322344.8	1731	17	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_16	33.4682685539602	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCCGGCATTTTGCTG	-49863856	True	NA	-1	True	AATAAA	-17	NA	49867576	49861203	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49861366_49861448_49861511_49861607_49861696_49861771_49861882_49862043_49862106_49862184_49862282_49862370_49862464_49862537_49862609_49862689_49862739_49863688_49863761_49863963_49864072_49864178_49864237_49864323_49864404_49865126_49865427_49866398_49866446_49867053_49867218_49867468
transcript_11016.known	chr1	+	733	4	FSM	ENSG00000122406.14	ENST00000646852.1	733	4	0	0	0	0	multi-exon	FALSE	canonical	3	6218	junction_3	145.522812262851	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTAGACCTTCTGGAATC	92746622	True	NA	NA	False	ATTAAA	-23	NA	92832085	92835293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_92832118_92833388_92833459_92833544_92833661_92834778
transcript_110174.known	chr19	-	1600	16	FSM	ENSG00000039650.12	ENST00000600910.5	1600	16	0	0	0	0	multi-exon	FALSE	canonical	2	32	junction_3	64.2470924547476	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCCGGCATTTTGCTG	-49863835	True	NA	-1	True	AATAAA	-17	NA	49867555	49861203	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49861366_49861448_49861511_49861607_49861696_49862043_49862106_49862184_49862282_49862370_49862464_49862537_49862609_49862689_49862739_49863688_49863761_49863963_49864072_49864178_49864237_49864323_49864404_49865126_49865427_49866398_49866446_49867053_49867218_49867468
transcript_110208.known	chr19	+	1438	13	FSM	ENSG00000104960.15	ENST00000598325.5	1438	13	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	333.947382332407	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTTTTAAAAACCTGCCT	49849158	True	NA	12	True	NA	NA	NA	49851019	49860725	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49851209_49854405_49854544_49854651_49854735_49854830_49854889_49854969_49855078_49856974_49857131_49857692_49857783_49857903_49857978_49858056_49858115_49858548_49858654_49859985_49860184_49860267_49860337_49860613
transcript_11021.known	chr1	+	271	2	FSM	ENSG00000122406.14	ENST00000644549.1	271	2	0	0	0	0	multi-exon	FALSE	canonical	3	7618	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTCTGTGTTAAGCTCT	92840110	False	NA	32	True	AATAAA	-15	NA	92840524	92841921	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_92840640_92841765
transcript_110217.known	chr19	+	1587	13	FSM	ENSG00000104960.15	ENST00000601675.5	1587	13	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_12	304.709971393564	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTTCTCTGCTCAC	49851130	False	NA	27	True	AATAAA	-15	NA	49851224	49860740	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49851500_49854405_49854544_49854651_49854735_49854830_49854889_49854969_49855078_49856974_49857131_49857692_49857783_49857903_49857978_49858056_49858115_49858548_49858654_49859985_49860184_49860267_49860337_49860565
transcript_110218.known	chr19	+	1577	13	FSM	ENSG00000104960.15	ENST00000599732.5	1577	13	0	0	0	0	multi-exon	FALSE	canonical	3	914	junction_1	123.676661770387	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTCTCTGCTCACTGCC	49843015	False	NA	31	True	AATAAA	-19	NA	49851190	49860744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49851500_49854405_49854544_49854651_49854735_49854830_49854889_49854969_49855078_49856974_49857131_49857692_49857783_49857903_49857978_49858056_49858115_49858548_49858654_49859985_49860184_49860267_49860337_49860613
transcript_110280.known	chr19	-	2025	5	FSM	ENSG00000204673.11	ENST00000391831.5	2025	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	123.045723208895	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAAATGTGAAGTGTGTT	-49876239	False	NA	NA	False	ATTAAA	-15	NA	49876249	49869045	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49870061_49871546_49871717_49871811_49871890_49872916_49873303_49875873
transcript_110282.known	chr19	-	1911	5	FSM	ENSG00000204673.11	ENST00000391832.7	1911	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	111.086677869131	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGTGTGTTGTGAGTG	-49877269	False	1417	NA	False	ATTAAA	-22	NA	49877279	49869038	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49870061_49871546_49871717_49871811_49871890_49872916_49873303_49877024
transcript_110283.known	chr19	-	1775	5	FSM	ENSG00000204673.11	ENST00000344175.10	1775	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	105.972873887613	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGTGTGTTGTGAGTG	-49877345	False	NA	NA	False	ATTAAA	-22	NA	49877355	49869038	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49870061_49871546_49871717_49871811_49871890_49872916_49873303_49877236
transcript_110284.known	chr19	-	1849	5	FSM	ENSG00000204673.11	ENST00000391834.6	1849	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	123.045723208895	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTGTGAGTGTTCATT	-49878234	True	NA	NA	False	ATTAAA	-28	NA	49878356	49869032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49870061_49871546_49871717_49871811_49871890_49872916_49873303_49878169
transcript_110288.known	chr19	-	752	3	FSM	ENSG00000039650.12	ENST00000626274.2	752	3	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_2	34.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGGGTACCTGTCCAAG	-49863844	True	NA	NA	False	AGTAAA	-25	NA	49867564	49865953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49866446_49867053_49867218_49867468
transcript_110289.known	chr19	-	645	3	FSM	ENSG00000039650.12	ENST00000595792.1	645	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	77.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGGGAGGCTGAAGCGGGA	-49863841	True	NA	NA	False	NA	NA	NA	49867561	49866140	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49866529_49867053_49867218_49867468
transcript_110294.known	chr19	+	1875	12	FSM	ENSG00000104960.15	ENST00000391842.5	1875	12	0	0	0	0	multi-exon	FALSE	canonical	3	914	junction_1	128.193358603645	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCTGCCTGCCTTCTC	49842983	True	NA	20	True	AATAAA	-8	NA	49851158	49860733	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49851500_49854405_49854544_49854651_49854735_49854830_49854889_49854969_49855078_49856974_49857131_49857692_49857783_49857903_49857978_49858056_49858115_49858548_49858654_49859985_49860184_49860267
transcript_110295.known	chr19	+	1716	8	FSM	ENSG00000104960.15	ENST00000597793.5	1716	8	0	0	0	0	multi-exon	FALSE	canonical	3	1159	junction_1	85.6132738134761	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTTCTCTGCTCAC	49856074	False	NA	27	True	AATAAA	-15	NA	49856135	49860740	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49857131_49857692_49857783_49857903_49857978_49858056_49858115_49858548_49858654_49859985_49860184_49860267_49860337_49860613
transcript_110296.known	chr19	-	1665	16	FSM	ENSG00000039650.12	ENST00000596014.5	1665	16	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_11	24.4834638072312	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACAATAAACGCTGTTTC	-49867249	False	NA	-28	True	NA	NA	NA	49867286	49861230	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49861366_49861448_49861511_49861607_49861696_49861771_49861882_49862043_49862106_49862184_49862282_49862370_49862464_49862537_49862609_49862689_49862739_49863688_49863761_49863963_49864072_49864178_49864237_49864323_49864404_49865126_49865427_49866398_49866446_49867053
transcript_110297.known	chr19	-	1723	16	FSM	ENSG00000039650.12	ENST00000593946.5	1723	16	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_15	67.6438385138579	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCCGGCATTTTGCTG	-49863625	False	3720	-1	True	AATAAA	-17	NA	49867234	49861203	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49861366_49861448_49861511_49861607_49861696_49861771_49861882_49862043_49862106_49862184_49862282_49862370_49862464_49862537_49862609_49862689_49862739_49863688_49863761_49863963_49864072_49864178_49864237_49864323_49864404_49865126_49865427_49866398_49866529_49867053
transcript_110298.known	chr19	-	619	2	FSM	ENSG00000039650.12	ENST00000629088.1	619	2	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAAGAAAAGAAAAAA	-49867193	False	3720	NA	False	NA	NA	NA	49867258	49866031	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49866446_49867053
transcript_110299.known	chr19	-	3075	5	FSM	ENSG00000204673.11	ENST00000391835.1	3075	5	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_4	57.308376351106	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAAATGTGAAGTGTGTT	-49878018	False	122	NA	False	ATTAAA	-15	NA	49878028	49869045	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49870061_49871546_49871717_49871811_49871890_49872916_49873303_49876602
transcript_11030.nic	chr1	+	2254	15	NIC	ENSG00000143033.18	novel	4075	15	NA	NA	-52	0	intron_retention	FALSE	canonical	3	187	junction_3	127.837049498531	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGATGATACTAGCCTTAA	93079170	False	NA	-51	True	AAAAAG	-19	NA	93079182	93137151	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_93079532_93110229_93110429_93110544_93110631_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_110300.known	chr19	+	2025	16	FSM	ENSG00000104946.14	ENST00000535102.6	2025	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	80.8988394368066	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCAGTTGGCTTCTTGT	49877496	False	NA	13	True	ATTAAA	-13	NA	49877665	49888743	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49877745_49878497_49878573_49880278_49880403_49881267_49881476_49882040_49882153_49882241_49882401_49882763_49882893_49882972_49883077_49883650_49883746_49884252_49884370_49884458_49884560_49884658_49884759_49887475_49887574_49887717_49887835_49888230_49888318_49888423
transcript_110303.known	chr19	-	782	4	FSM	ENSG00000213024.12	ENST00000600583.5	782	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	36.8057966449127	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCACTGGAGGGTTTAAT	-49918221	True	NA	NA	False	NA	NA	NA	49929504	49909698	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49909885_49911104_49911367_49927693_49927849_49929325
transcript_110305.known	chr19	-	894	4	FSM	ENSG00000213024.12	ENST00000596437.5	894	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	32.0970749792286	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACAGCGACTCTTGCTT	-49918248	True	NA	NA	False	NA	NA	NA	49929531	49909580	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49909885_49911104_49911367_49927693_49927816_49929325
transcript_110307.known	chr19	-	473	4	FSM	ENSG00000213024.12	ENST00000596680.5	473	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	30.9443945740671	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTGCAAAGACGGCAACAA	-49918146	True	NA	NA	False	NA	NA	NA	49929429	49909751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49909885_49918507_49918622_49927693_49927816_49929325
transcript_11031.nic	chr1	+	2346	15	NIC	ENSG00000143033.18	novel	4075	15	NA	NA	6	150	intron_retention	FALSE	canonical	3	187	junction_3	127.837049498531	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGCATGGTGTTAGACAA	93066738	True	NA	0	True	ATTAAA	-13	NA	93079240	93137301	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_93079532_93110229_93110429_93110544_93110631_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_110310.known	chr19	-	564	4	FSM	ENSG00000213024.12	ENST00000594673.5	564	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	35.6495285928003	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGCACTGGAGGGTTTAA	-49918152	True	NA	NA	False	NA	NA	NA	49929435	49909699	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49909885_49918507_49918622_49927693_49927849_49929325
transcript_110312.known	chr19	+	2007	3	FSM	ENSG00000169136.13	ENST00000423777.7	2007	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	3	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGCATCTTGTCTTTGA	49927544	True	NA	11	True	AATAAA	-19	NA	49929204	49933935	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49929401_49930731_49931029_49932421
transcript_110313.known	chr19	+	722	3	FSM	ENSG00000169136.13	ENST00000596658.1	722	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACCACCACCACTACCAC	49930090	True	NA	NA	False	NA	NA	NA	49930218	49932632	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_49930433_49930731_49931029_49932421
transcript_110314.known	chr19	-	3361	3	FSM	ENSG00000213024.12	ENST00000352066.8	3361	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	32.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGCTGTTAATATGGAT	-49918221	True	NA	-1	True	AATAAA	-19	NA	49929504	49906824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49909885_49927693_49927816_49929325
transcript_110315.known	chr19	-	562	3	FSM	ENSG00000213024.12	ENST00000599560.5	562	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	54.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGATTTGCTTTGGGAGCC	-49929235	False	NA	NA	False	NA	NA	NA	49929763	49909858	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49909885_49927693_49927816_49929349
transcript_110317.known	chr19	-	2053	3	FSM	ENSG00000213024.12	ENST00000597029.5	2053	3	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	27.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGCTGTGTGCTTTGCGTTT	-49918160	True	NA	-1	True	NA	NA	NA	49929443	49908104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49909885_49927693_49927849_49929325
transcript_11032.nic	chr1	+	2624	15	NIC	ENSG00000143033.18	novel	4075	15	NA	NA	3	425	intron_retention	FALSE	canonical	3	187	junction_3	127.837049498531	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCATTGTCGTCTTAAT	93066735	True	NA	19	True	AATATA	-28	NA	93079237	93137576	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_93079532_93110229_93110429_93110544_93110631_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_110327.known	chr19	-	579	3	FSM	ENSG00000213024.12	ENST00000599567.5	579	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACAGCTGCCACCCCAGC	-49918221	True	NA	NA	False	NA	NA	NA	49929504	49909507	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49909885_49918507_49918622_49929416
transcript_11033.nic	chr1	+	3289	15	NIC	ENSG00000143033.18	novel	4075	15	NA	NA	6	-832	intron_retention	FALSE	canonical	3	187	junction_3	127.837049498531	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTACAGTTGTCTTCTGTT	93066738	True	NA	10	True	AAAAAG	-17	NA	93079240	93138244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_93079532_93110229_93110429_93110544_93110631_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_110333.known	chr19	-	3479	2	FSM	ENSG00000213024.12	ENST00000422090.2	3479	2	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_1	0	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGCTGTTAATATGGAT	-49929216	False	NA	-1	True	AATAAA	-19	NA	49929744	49906824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49909885_49929325
transcript_110334.nnic	chr19	-	3250	2	NIC	ENSG00000213024.12	novel	3479	2	NA	NA	-8	0	intron_retention	FALSE	canonical	3	58	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGCTGTTAATATGGAT	-49918256	True	NA	-1	True	AATAAA	-19	NA	49929539	49906824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_49909885_49929349
transcript_110336.nnic	chr19	-	2541	2	NIC	ENSG00000213024.12	novel	562	3	NA	NA	-8	571	intron_retention	FALSE	canonical	3	58	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCAGGAGACAGCAGCCT	-49918256	True	NA	NA	False	AAAAAG	-4	NA	49929539	49907533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_49909885_49929349
transcript_11034.nic	chr1	+	4085	15	NIC	ENSG00000143033.18	novel	4046	16	NA	NA	-3	0	intron_retention	FALSE	canonical	3	187	junction_3	127.837049498531	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGTTTTGCTTCTGTAT	93066777	True	NA	36	True	ATTAAA	-39	NA	93079279	93139079	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_93079532_93110229_93110429_93110544_93110631_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_110342.known	chr19	-	1923	15	FSM	ENSG00000105053.11	ENST00000316763.8	1923	15	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_14	48.4951081059119	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAGGAGTCAGTTATCT	-50022535	True	NA	-6	True	AATAAA	-14	NA	50025372	49976467	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49976785_49979082_49979243_49980954_49981014_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50009235_50009386_50016023_50016164_50020584_50020648_50025266
transcript_110343.known	chr19	-	2126	15	FSM	ENSG00000105053.11	ENST00000599538.5	2126	15	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_14	28.6616432871245	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAATGAAGTAA	NA	False	NA	NA	False	NA	NA	NA	50025946	49976759	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49976785_49979082_49979243_49980954_49981014_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50009235_50009386_50016023_50016164_50020584_50020648_50025345
transcript_110347.known	chr19	-	1749	14	FSM	ENSG00000105053.11	ENST00000377011.6	1749	14	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_13	60.6331485099104	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTAATAAATTGTTTTAC	-50022535	True	NA	-30	True	NA	NA	NA	50025372	49976491	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49976785_49979082_49979243_49980954_49981014_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50016023_50016164_50020584_50020648_50025266
transcript_110348.nic	chr19	-	1919	14	NIC	ENSG00000105053.11	novel	1923	15	NA	NA	-158	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_11	46.423570834158	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAGGAGTCAGTTATCT	-50025569	False	NA	-6	True	AATAAA	-14	NA	50025597	49976467	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_49976785_49979082_49979243_49980954_49981014_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50016023_50016164_50020584_50020648_50025345
transcript_110357.known	chr19	-	1831	13	FSM	ENSG00000105053.11	ENST00000594092.5	1831	13	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_12	65.0608155668389	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTTTCCTCATCATCAAA	-50022490	True	NA	-14	True	AATAAA	-19	NA	50025327	49981699	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49982189_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50009235_50009386_50016023_50016164_50020584_50020648_50025266
transcript_110358.nic	chr19	-	2022	13	NIC	ENSG00000105053.11	novel	1831	13	NA	NA	-158	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	51.2934774930822	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTTTCCTCATCATCAAA	-50025569	False	NA	-14	True	AATAAA	-19	NA	50025597	49981699	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_49982189_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50009235_50009386_50016023_50016164_50020584_50020648_50025345
transcript_11036.nic	chr1	+	2083	14	NIC	ENSG00000143033.18	novel	1951	14	NA	NA	-52	0	intron_retention	FALSE	canonical	3	146	junction_10	177.613035930768	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGATGATACTAGCCTTAA	93079170	False	NA	-51	True	AAAAAG	-19	NA	93079182	93137151	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_93079532_93110229_93110429_93110544_93110631_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_110362.nic	chr19	-	1649	12	NIC	ENSG00000105053.11	novel	1831	13	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	64.444222791804	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTTTCCTCATCATCAAA	-50022537	True	NA	-14	True	AATAAA	-19	NA	50025374	49981699	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_49982189_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50016023_50016164_50020584_50020648_50025345
transcript_110365.known	chr19	-	1979	12	FSM	ENSG00000105053.11	ENST00000593919.5	1979	12	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_11	30.5505948055878	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATTGTGTGTGGGAAAC	-50022535	True	NA	NA	False	NA	NA	NA	50025372	49987700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50009235_50009386_50016023_50016164_50020584_50020648_50025345
transcript_110374.known	chr19	+	4642	5	FSM	ENSG00000142528.16	ENST00000270617.8	4642	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	15.4656878282215	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGGTTCCTTCTCTCAG	50025208	True	NA	13	True	ATTAAA	-16	NA	50026004	50048776	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50026123_50030891_50031092_50039160_50039288_50041729_50041820_50044669
transcript_110376.known	chr19	+	4715	5	FSM	ENSG00000142528.16	ENST00000391821.6	4715	5	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_1	12.4172259381876	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCATTGGTTCCTTCTC	NA	False	NA	9	True	ATTAAA	-12	NA	50025805	50048772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50026123_50031013_50031092_50039160_50039288_50041729_50041820_50044669
transcript_110379.known	chr19	+	2833	4	FSM	ENSG00000142528.16	ENST00000445728.7	2833	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	26.7124606795322	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGAAAGTTTGTGCGCAT	50025208	True	NA	2	True	AATAAA	-16	NA	50026004	50047167	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50026123_50039160_50039288_50041729_50041820_50044669
transcript_110385.known	chr19	-	728	7	FSM	ENSG00000161652.13	ENST00000293405.8	814	7	86	0	-15	0	multi-exon	FALSE	canonical	0	0	junction_3	8.83176086632785	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGTCTCTGTCCATTTC	-50162909	True	NA	0	True	AATAAA	-26	NA	50163195	50152547	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_50152652_50154599_50154727_50158267_50158349_50159229_50159251_50159493_50159581_50162738_50162814_50162962
transcript_110387.known	chr19	+	6815	42	FSM	ENSG00000105357.20	ENST00000425460.6	6815	42	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	21.4276864495311	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATCTCTGTGGCTGTGTGT	50203013	True	NA	8	True	AATAAA	-17	NA	50203621	50310540	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50203672_50210362_50210771_50217614_50217772_50223082_50223111_50223246_50223350_50224153_50224178_50225584_50225678_50226902_50226967_50230524_50230624_50231929_50232071_50244241_50244338_50247003_50247123_50248986_50249140_50249649_50249824_50250514_50250689_50252638_50252754_50257298_50257487_50259143_50259266_50260645_50260716_50261474_50261636_50263311_50263421_50266876_50267009_50268160_50268368_50271408_50271547_50271848_50271973_50272559_50272732_50275990_50276204_50276756_50276902_50278082_50278290_50280036_50280142_50280230_50280384_50281593_50281843_50286481_50286695_50289435_50289649_50290886_50291049_50292260_50292390_50293232_50293322_50293563_50293688_50301660_50301870_50307048_50307158_50309004_50309178_50309639
transcript_110389.known	chr19	+	6787	41	FSM	ENSG00000105357.20	ENST00000376970.6	6787	41	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	21.5197583629557	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTGTGGCTGTGTGTGT	50203019	True	NA	10	True	AATAAA	-19	NA	50203627	50310542	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50203672_50210362_50210771_50217614_50217772_50223082_50223111_50223246_50223350_50225584_50225678_50226902_50226967_50230524_50230624_50231929_50232071_50244241_50244338_50247003_50247123_50248986_50249140_50249649_50249824_50250514_50250689_50252638_50252754_50257298_50257487_50259143_50259266_50260645_50260716_50261474_50261636_50263311_50263421_50266876_50267009_50268160_50268368_50271408_50271547_50271848_50271973_50272559_50272732_50275990_50276204_50276756_50276902_50278082_50278290_50280036_50280142_50280230_50280384_50281593_50281843_50286481_50286695_50289435_50289649_50290886_50291049_50292260_50292390_50293232_50293322_50293563_50293688_50301660_50301870_50307048_50307158_50309004_50309178_50309639
transcript_110393.known	chr19	+	3046	24	FSM	ENSG00000105357.20	ENST00000599920.5	3046	24	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	10.9878778368381	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATGAAGAAATTTGAAG	50203028	True	NA	NA	False	NA	NA	NA	50203636	50271482	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50203672_50210362_50210771_50217614_50217772_50223082_50223111_50223246_50223350_50224153_50224178_50225584_50225678_50226902_50226967_50230524_50230624_50231929_50232071_50244241_50244338_50247003_50247123_50248986_50249140_50249649_50249824_50250514_50250689_50252638_50252754_50257298_50257487_50259143_50259266_50260645_50260716_50261474_50261636_50263311_50263421_50266876_50267009_50268160_50268368_50271408
transcript_110394.nic	chr19	+	3122	24	NIC	ENSG00000105357.20	novel	5988	40	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_5	11.4548509630641	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATGAAGAAATTTGAAG	50205110	True	NA	NA	False	NA	NA	NA	50205443	50271482	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_50205555_50210362_50210771_50217614_50217772_50223082_50223111_50223246_50223350_50224153_50224178_50225584_50225678_50226902_50226967_50230524_50230624_50231929_50232071_50244241_50244338_50247003_50247123_50248986_50249140_50249649_50249824_50250514_50250689_50252638_50252754_50257298_50257487_50259143_50259266_50260645_50260716_50261474_50261636_50263311_50263421_50266876_50267009_50268160_50268368_50271408
transcript_110398.nnic	chr19	+	1648	7	NNC	ENSG00000105357.20	novel	6137	42	NA	NA	7806	0	intron_retention	FALSE	canonical	3	8	junction_1	29.3919868142473	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATCTCTGTGGCTGTGTGT	50291677	True	NA	8	True	AATAAA	-17	NA	50292569	50310540	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_50292613_50293232_50293322_50293563_50293688_50301660_50301870_50307048_50307158_50309004_50309178_50309639
transcript_110412.known	chr19	+	2416	10	FSM	ENSG00000131408.15	ENST00000253727.10	2416	10	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_5	54.2445309298778	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACAGTTAGGCACAATTCT	50371202	True	NA	NA	False	AATAAA	-18	NA	50376456	50383388	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50376577_50376718_50376827_50377586_50377649_50377732_50377871_50378148_50378440_50378521_50378797_50379001_50379182_50379779_50379880_50381965_50382175_50382455
transcript_110413.known	chr19	+	1830	10	FSM	ENSG00000131408.15	ENST00000599105.5	1830	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	140.420004905917	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTTTTATTTAATAAAAAC	50371218	True	NA	15	True	NA	NA	NA	50376472	50382950	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50376577_50376718_50376827_50377586_50377649_50377732_50377871_50378148_50378440_50378521_50378797_50379133_50379182_50379779_50379880_50381965_50382175_50382455
transcript_110414.known	chr19	+	1915	10	FSM	ENSG00000131408.15	ENST00000598168.5	1915	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	146.534789195073	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAACAGGAAAATAAAATAT	50371203	True	NA	-25	True	AATAAA	-12	NA	50376457	50382978	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50376577_50376718_50376827_50377586_50377649_50377732_50377871_50378148_50378440_50378521_50378797_50379091_50379182_50379779_50379880_50381965_50382175_50382455
transcript_110432.known	chr19	+	3524	28	FSM	ENSG00000062822.16	ENST00000601098.6	3524	28	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	200.755985480999	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCGGGACCAGGGAGAATT	50369512	True	NA	-25	True	NA	NA	NA	50384341	50417971	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50384391_50395024_50395151_50398850_50399054_50399370_50399485_50401777_50401925_50401998_50402125_50402204_50402374_50402453_50402536_50402611_50402742_50403052_50403220_50403492_50403598_50406181_50406323_50406406_50406518_50406982_50407175_50407326_50407416_50408784_50408902_50409121_50409236_50409518_50409667_50413425_50413522_50413741_50413880_50414814_50414991_50415437_50415591_50415723_50415827_50416395_50416529_50416609_50416724_50417044_50417098_50417171_50417270_50417841
transcript_110442.known	chr19	+	3514	27	FSM	ENSG00000062822.16	ENST00000595904.6	3514	27	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_14	162.183296296607	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGTGCTTTGTGGTCTCT	50369517	True	NA	18	True	AATAAA	-18	NA	50384346	50418014	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50384391_50398850_50399054_50399370_50399485_50401777_50401925_50401998_50402125_50402204_50402374_50402453_50402536_50402611_50402742_50403052_50403220_50403492_50403598_50406181_50406323_50406406_50406518_50406982_50407175_50407326_50407416_50408706_50408902_50409121_50409236_50409518_50409667_50413425_50413522_50413741_50413880_50414814_50414991_50415437_50415591_50415723_50415827_50416395_50416529_50416609_50416724_50417044_50417098_50417171_50417270_50417841
transcript_110444.known	chr19	+	3341	27	FSM	ENSG00000062822.16	ENST00000613923.6	3341	27	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	201.611455513031	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGACCAGGGAGAATTAATA	50369504	True	NA	-21	True	NA	NA	NA	50384333	50417975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50384391_50398847_50399054_50399370_50399485_50401777_50401925_50401998_50402125_50402204_50402374_50402453_50402536_50402611_50402742_50403052_50403220_50403492_50403598_50406181_50406323_50406406_50406518_50406982_50407175_50407326_50407416_50408784_50408902_50409121_50409236_50409518_50409595_50413425_50413522_50413741_50413880_50414814_50414991_50415437_50415591_50415723_50415827_50416395_50416529_50416609_50416724_50417044_50417098_50417171_50417270_50417841
transcript_110450.known	chr19	+	3436	27	FSM	ENSG00000062822.16	ENST00000440232.7	3436	27	0	0	0	0	multi-exon	FALSE	canonical	3	505	junction_1	96.4756767948158	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGTGCTTTGTGGTCTCT	50369517	True	NA	18	True	AATAAA	-18	NA	50384346	50418014	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50384391_50398850_50399054_50399370_50399485_50401777_50401925_50401998_50402125_50402204_50402374_50402453_50402536_50402611_50402742_50403052_50403220_50403492_50403598_50406181_50406323_50406406_50406518_50406982_50407175_50407326_50407416_50408784_50408902_50409121_50409236_50409518_50409667_50413425_50413522_50413741_50413880_50414814_50414991_50415437_50415591_50415723_50415827_50416395_50416529_50416609_50416724_50417044_50417098_50417171_50417270_50417841
transcript_11047.known	chr1	+	3845	13	FSM	ENSG00000143033.18	ENST00000540243.5	3845	13	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	173.542181871984	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGTTTTGCTTCTGTAT	93066732	True	NA	36	True	ATTAAA	-39	NA	93079234	93139079	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_93079532_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_110483.known	chr19	+	3474	26	FSM	ENSG00000062822.16	ENST00000600859.5	3474	26	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_21	168.208423094683	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATGGTGCTTTGTGGTCT	50384192	False	NA	16	True	AATAAA	-16	NA	50384203	50418012	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50384391_50398850_50399054_50399370_50399485_50401777_50401925_50401998_50402125_50402204_50402374_50402453_50402536_50402611_50402742_50403052_50403220_50403492_50403598_50406181_50406323_50406406_50406518_50406982_50407175_50407326_50407416_50408784_50408902_50409121_50409236_50409518_50409667_50413425_50413522_50413741_50413880_50414814_50414991_50415437_50415591_50416395_50416529_50416609_50416724_50417044_50417098_50417171_50417270_50417841
transcript_11051.nic	chr1	+	1461	12	NIC	ENSG00000143033.18	novel	4075	15	NA	NA	0	2	intron_retention	FALSE	canonical	3	187	junction_3	131.431533255472	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTAGGTCGTCCACCTGG	93066767	True	NA	NA	False	AAAAAG	-12	NA	93079269	93133742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_93079532_93110229_93110429_93110544_93110631_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277_93129449_93133702
transcript_110539.known	chr19	+	3792	6	FSM	ENSG00000269404.7	ENST00000595883.6	3792	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	13.0629246342463	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGGCGTATGCCTGTA	50418537	True	NA	NA	False	AATAAA	-13	NA	50418937	50431314	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50418986_50419945_50419974_50422472_50422546_50422822_50423038_50423604_50423756_50428037
transcript_110540.known	chr19	+	847	5	FSM	ENSG00000269404.7	ENST00000596074.5	847	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	25.2289516230857	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTGACAGGACCTATGGA	50418540	True	NA	NA	False	NA	NA	NA	50418940	50428587	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50418986_50419945_50419974_50422472_50422546_50423604_50423756_50428037
transcript_110544.known	chr19	+	1443	6	FSM	ENSG00000269404.7	ENST00000270632.7	1443	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	26.7985074211233	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCCTTTTGTCATGTCT	50418557	False	NA	18	True	NA	NA	NA	50418957	50428989	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50418986_50419945_50419974_50422472_50422546_50422822_50423038_50423604_50423752_50428037
transcript_110545.known	chr19	+	3604	28	FSM	ENSG00000086967.10	ENST00000357701.6	3604	28	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	3.40337926152893	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGAGTGTCTGTCCTTC	50432800	True	NA	8	True	AAAACA	-13	NA	50432891	50466321	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50432973_50435160_50435251_50435775_50435863_50436011_50436161_50436616_50436735_50437472_50437522_50437658_50437719_50440879_50441077_50442180_50442314_50443493_50443619_50443710_50443817_50445879_50446053_50448224_50448391_50450828_50450936_50451279_50451310_50451863_50452004_50454019_50454180_50454264_50454370_50455107_50455297_50455509_50455645_50458586_50458755_50458917_50459007_50459110_50459307_50460039_50460180_50461541_50461702_50461899_50462037_50464345_50464533_50466194
transcript_110551.known	chr19	+	2014	8	FSM	ENSG00000161671.17	ENST00000376918.7	2014	8	0	0	0	0	multi-exon	TRUE	canonical	3	4	junction_6	33.8640740343521	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAGCCTCCTGCATTGTAT	50467561	True	NA	31	True	ATTAAA	-23	NA	50476498	50483351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50476659_50477928_50478002_50478956_50479067_50480110_50480216_50480580_50480763_50480883_50480978_50481860_50481948_50482148
transcript_110554.known	chr19	+	1610	8	FSM	ENSG00000161671.17	ENST00000598585.1	1610	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	28.2626168322058	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTCCTGATGTACAAGCTT	50467583	True	NA	-15	True	NA	NA	NA	50476520	50483198	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50476659_50477928_50478002_50478956_50479067_50480110_50480216_50480580_50480763_50480883_50480978_50482148_50482256_50482397
transcript_110557.known	chr19	+	9439	7	FSM	ENSG00000161671.17	ENST00000334976.11	9439	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_6	12.3749298538977	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATTGATACACTGATATT	50467569	True	NA	4	True	AATAAA	-16	NA	50476506	50490871	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50476659_50477928_50478002_50478956_50479067_50480110_50480216_50480580_50480763_50480883_50480978_50482148
transcript_110562.known	chr19	+	1926	7	FSM	ENSG00000161671.17	ENST00000599293.1	1926	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	28.6802293497726	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTAAACTGTCCCCCAG	50467596	True	NA	0	True	NA	NA	NA	50476533	50483320	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50476724_50477928_50478002_50478956_50479067_50480110_50480216_50480580_50480763_50480883_50480978_50482148
transcript_110565.known	chr19	-	1225	5	FSM	ENSG00000142530.11	ENST00000595790.5	1225	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	6.67083203206317	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCAGGCCACGAGCGGTT	-50476727	False	NA	NA	False	AATAAA	-22	NA	50476746	50466787	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_50466956_50467621_50467830_50475324_50475456_50475832_50475934_50476129
transcript_110566.known	chr19	-	1375	5	FSM	ENSG00000142530.11	ENST00000600100.6	1375	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	11.0538454847171	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCAGGCCACGAGCGGTT	-50476719	True	NA	NA	False	AATAAA	-22	NA	50476848	50466787	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_50466956_50467621_50467830_50475324_50475504_50475832_50475934_50476129
transcript_110568.known	chr19	-	582	5	FSM	ENSG00000161677.12	ENST00000594350.1	582	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	8.7571399440685	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCTGGCCCAGGGCCTGTG	-50511081	False	NA	NA	False	NA	NA	NA	50511159	50506256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_50506273_50506377_50506573_50507573_50507700_50510285_50510446_50511074
transcript_110569.known	chr19	-	802	5	FSM	ENSG00000161677.12	ENST00000601423.5	802	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	7.08431365765238	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCCTGTGTCTGACG	-50511084	False	NA	0	True	AATAAA	-18	NA	50511162	50505997	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_50506273_50506377_50506573_50507573_50507700_50510285_50510446_50511116
transcript_110570.known	chr19	-	733	4	FSM	ENSG00000161677.12	ENST00000595669.5	733	4	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_2	8.64098759787715	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGTGTCT	-50511105	True	NA	-4	True	AATAAA	-14	NA	50511220	50506001	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_50506273_50506377_50506573_50510285_50510449_50511116
transcript_110574.nnic	chr19	-	3532	3	NNC	ENSG00000131409.13	novel	3019	3	NA	NA	-6168	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	2.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCACGGAGGAGAGAAAACAA	NA	False	NA	-2	True	AGTAAA	-25	NA	50557210	50516891	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_50519416_50548541_50548874_50556534
transcript_110575.known	chr19	-	853	3	FSM	ENSG00000131409.13	ENST00000600381.1	853	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCTGGACCTGATCCGCC	-50567972	False	NA	NA	False	NA	NA	NA	50568045	50518996	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_50519416_50548541_50548874_50567943
transcript_110577.known	chr19	-	2526	11	FSM	ENSG00000213023.11	ENST00000600079.6	2526	11	0	0	0	0	multi-exon	TRUE	canonical	3	169	junction_10	33.1837309535863	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGCCTCCTGTCCTCTCT	-50639144	True	NA	0	True	AATAAA	-25	NA	50639881	50621976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_50622482_50622686_50622756_50625161_50625295_50625392_50625565_50625896_50626018_50629293_50629513_50629783_50630172_50632285_50632812_50637263_50637427_50639024_50639163_50639789
transcript_110581.nnic	chr19	+	397	2	NNC	ENSG00000235034.7	novel	477	2	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	3	294	junction_1	0	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTTCTCTCTGCAAAAT	50655254	True	NA	8	True	TATAAA	-19	NA	50658472	50659306	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_50658510_50658946
transcript_110582.known	chr19	+	477	2	FSM	ENSG00000235034.7	ENST00000490451.1	477	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTCTGCAAAATCTTG	50655277	True	NA	12	True	TATAAA	-23	NA	50658495	50659310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50658609_50658946
transcript_110583.known	chr19	+	1375	4	FSM	ENSG00000105472.14	ENST00000250340.9	1375	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	13.9283882771841	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAGGGGCAGTGAAGGCA	50723146	True	NA	21	True	AATAAA	-17	NA	50723363	50725708	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_50723673_50723904_50724092_50724409_50724602_50725021
transcript_110586.known	chr19	-	971	5	FSM	ENSG00000167747.16	ENST00000597493.6	1570	5	0	599	0	17	multi-exon	FALSE	canonical	3	24	junction_4	1073.84391323879	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGGTGGATAAGTGGGC	-50781950	True	NA	NA	False	NA	NA	NA	50804620	50798302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_50798959_50799293_50799358_50802216_50802258_50802453_50802615_50804571
transcript_11059.nic	chr1	+	1299	11	NIC	ENSG00000143033.18	novel	4075	15	NA	NA	10	-4439	intron_retention	FALSE	canonical	3	187	junction_3	136.121600049368	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAGAAGCATTTGTTTG	93066742	True	NA	NA	False	AATAAA	-1	NA	93079244	93129301	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_93079532_93110229_93110429_93110544_93110631_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277
transcript_110595.known	chr19	-	1718	4	FSM	ENSG00000167747.16	ENST00000641834.2	1735	4	0	17	0	0	multi-exon	FALSE	canonical	3	1177	junction_3	481.072644087033	1577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGTTTTTATAAGGATTG	-50804569	True	NA	-18	True	CATAAA	-19	NA	50804929	50797703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_50798959_50799293_50799358_50802216_50802258_50804571
transcript_110596.known	chr19	-	292	2	FSM	ENSG00000167747.16	ENST00000602125.1	292	2	0	0	0	0	multi-exon	FALSE	canonical	3	1177	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCCAACATGGTGAAACC	-50781924	True	NA	NA	False	NA	NA	NA	50804594	50801988	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_50802258_50804571
transcript_110597.known	chr19	-	1365	6	FSM	ENSG00000167754.13	ENST00000593428.5	1365	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	3.03315017762062	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCTGTGTCTCCTCCCT	-50953033	True	NA	-4	True	AATAAA	-14	NA	50953093	50943302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_50943787_50948639_50948774_50948858_50949116_50949854_50950117_50952584_50952669_50952949
transcript_110598.known	chr19	-	1708	6	FSM	ENSG00000167755.15	ENST00000376851.7	1708	6	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_5	2.28035085019828	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGCTTTTTGCTTTGAT	-50968949	True	NA	1	True	AATAAA	-19	NA	50968972	50958630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_50959317_50961743_50961881_50963301_50963550_50967168_50967326_50968064_50968113_50968540
transcript_11060.nic	chr1	+	1508	11	NIC	ENSG00000143033.18	novel	4075	15	NA	NA	-52	-4292	intron_retention	FALSE	canonical	3	187	junction_3	136.121600049368	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAAGTTGATCTGTGGCT	93079170	False	NA	NA	False	ATTAAA	-36	NA	93079182	93129448	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_93079532_93110229_93110429_93110544_93110631_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277
transcript_110601.known	chr19	-	1051	6	FSM	ENSG00000129455.15	ENST00000391806.6	1051	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	11.443775600736	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCTGTCTCTGTTTTGGC	-51001570	False	NA	1	True	AATAAA	-20	NA	51001604	50996006	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_50996215_50997750_50997885_50999995_51000259_51000423_51000719_51001097_51001176_51001531
transcript_110602.known	chr19	-	853	5	FSM	ENSG00000129455.15	ENST00000291726.11	853	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	11.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCCTGTCTCTGTTTTGG	-51001668	True	NA	0	True	AATAAA	-19	NA	51001702	50996007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_50996215_50997750_50997885_50999995_51000259_51001097_51001176_51001531
transcript_110603.known	chr19	-	555	4	FSM	ENSG00000129455.15	ENST00000347619.8	555	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	11.8977121983832	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGCCTGTCTCTGTTTTG	-51001634	True	NA	-1	True	AATAAA	-18	NA	51001668	50996008	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_50996215_50997750_50997885_51001097_51001176_51001531
transcript_110604.known	chr19	-	456	3	FSM	ENSG00000129455.15	ENST00000320838.9	456	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCCTGTCTCTGTTTTGG	-51001668	True	NA	0	True	AATAAA	-19	NA	51001702	50996007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_50996215_51001097_51001176_51001531
transcript_110605.known	chr19	-	1513	6	FSM	ENSG00000167754.13	ENST00000336334.8	1513	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	3.03315017762062	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCTGTGTCTCCTCCCT	-50952978	True	NA	-4	True	AATAAA	-14	NA	50953038	50943302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_50943787_50948639_50948774_50948858_50949116_50949854_50950117_50952584_50952669_50952746
transcript_110606.known	chr19	-	2984	6	FSM	ENSG00000129451.12	ENST00000358789.8	2984	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	14.0939703419583	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTTACTTGATAATG	-51019668	True	NA	NA	False	NA	NA	NA	51019709	51012738	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_51014953_51015416_51015551_51015881_51016157_51017109_51017291_51019042_51019140_51019626
transcript_11061.nic	chr1	+	1280	11	NIC	ENSG00000143033.18	novel	1951	14	NA	NA	-3	2	intron_retention	FALSE	canonical	3	146	junction_10	187.377186444882	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTAGGTCGTCCACCTGG	93066777	True	NA	NA	False	AAAAAG	-12	NA	93079279	93133742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_93079532_93110229_93110429_93110544_93110631_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93133702
transcript_110610.known	chr19	-	1820	5	FSM	ENSG00000167759.13	ENST00000595793.6	1820	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	5.11737237261468	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTATTTGCATGGTTCCC	-51064955	True	NA	-3	True	AATAAA	-20	NA	51065092	51055625	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_51056776_51058537_51058675_51059824_51060094_51060432_51060620_51065015
transcript_110611.known	chr19	-	2126	3	FSM	ENSG00000142544.7	ENST00000421832.3	2126	3	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	4.5	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTCGTTCATGTTACTG	-51107728	True	NA	-1	True	AATAAA	-16	NA	51108409	51097605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_51099140_51104061_51104591_51108346
transcript_110614.known	chr19	+	3347	8	FSM	ENSG00000142549.10	ENST00000270642.9	3347	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	9.8685234509546	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATTGGATTTTCTATC	NA	False	NA	8	True	AATAAA	-23	NA	51311643	51330891	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_51311927_51322063_51322143_51323661_51323895_51325345_51325466_51326763_51326899_51327079_51327201_51327731_51327887_51328670
transcript_110617.known	chr19	-	3689	10	FSM	ENSG00000186806.6	ENST00000335624.5	3689	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	45.4429502606847	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGGAGGCGGCTGGTTTC	-51342123	False	NA	-40	True	AATAAA	-14	NA	51342139	51331540	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_51332641_51333790_51333946_51334190_51334305_51337237_51337535_51337929_51338209_51338887_51339143_51340014_51340300_51340432_51340727_51341152_51342008_51342084
transcript_110620.nnic	chr19	-	2205	7	NNC	ENSG00000186806.6	novel	2297	7	NA	NA	-39	-149	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	46.4901423242964	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGGTGCCAGTGAAGA	-51339631	True	NA	-2	True	AATAAA	-20	NA	51339794	51331689	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_51332641_51333790_51333946_51334190_51334305_51337237_51337535_51337929_51338209_51338887_51339143_51339640
transcript_110621.nic	chr19	-	2280	6	ISM	ENSG00000186806.6	ENST00000600663.1	2297	7	533	5	533	0	3prime_fragment	FALSE	canonical	0	0	junction_1	39.7441819641567	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGGAGGCGGCTGGTTTC	-51339112	False	NA	-40	True	AATAAA	-14	NA	51339222	51331540	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_51332641_51333790_51333946_51334190_51334305_51337237_51337535_51337929_51338209_51338887
transcript_110622.nic	chr19	-	2131	6	ISM	ENSG00000186806.6	ENST00000600663.1	2297	7	533	154	533	-149	3prime_fragment	FALSE	canonical	0	0	junction_1	39.7441819641567	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGGTGCCAGTGAAGA	-51339112	False	NA	-2	True	AATAAA	-20	NA	51339222	51331689	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_51332641_51333790_51333946_51334190_51334305_51337237_51337535_51337929_51338209_51338887
transcript_110623.nic	chr19	-	2002	6	ISM	ENSG00000186806.6	ENST00000600663.1	2297	7	533	283	533	-278	3prime_fragment	FALSE	canonical	0	0	junction_1	39.7441819641567	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGGCCTGAGACTCTC	-51339112	False	NA	-12	True	CATAAA	-12	NA	51339222	51331818	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_51332641_51333790_51333946_51334190_51334305_51337237_51337535_51337929_51338209_51338887
transcript_110625.known	chr19	-	872	6	FSM	ENSG00000105379.10	ENST00000309244.9	872	6	0	0	0	0	multi-exon	FALSE	canonical	3	729	junction_5	16.1938259839977	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTTAACTTATTTCCT	-51356720	True	NA	-20	True	AATAAA	-19	NA	51366388	51345168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_51345382_51346899_51347059_51350328_51350392_51353131_51353291_51354149_51354309_51366269
transcript_110627.known	chr19	-	575	5	FSM	ENSG00000105379.10	ENST00000596253.1	575	5	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_3	322.468118579186	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGCACGGCCGGCGTCAAG	-51356698	True	NA	-136	True	NA	NA	NA	51366366	51345284	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_51345382_51346899_51347059_51350328_51350392_51354149_51354309_51366269
transcript_110628.nic	chr19	-	689	5	ISM	ENSG00000105379.10	ENST00000309244.9	872	6	-30	1731	-30	-1212	5prime_fragment	FALSE	canonical	3	729	junction_4	18.0883249639097	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCCCCTGGCCAGCGGG	-51366289	False	NA	NA	False	NA	NA	NA	51366418	51346899	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_51347059_51350328_51350392_51353131_51353291_51354149_51354309_51366269
transcript_11063.nic	chr1	+	1190	10	NIC	ENSG00000143033.18	novel	1951	14	NA	NA	-3	-6491	intron_retention	FALSE	canonical	3	187	junction_3	142.683366969933	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGAAAGATATGAGCATGT	93066777	True	NA	NA	False	NA	NA	NA	93079279	93127249	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_93079532_93110229_93110429_93110544_93110631_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231
transcript_110630.known	chr19	-	1335	2	FSM	ENSG00000262874.2	ENST00000574814.2	1335	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGCGTGTGTGCGCGCGC	-51390216	True	NA	-22	True	AATAAA	-19	NA	51390591	51388288	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_51389510_51390477
transcript_110649.known	chr19	+	6552	5	FSM	ENSG00000105497.8	ENST00000262259.7	6552	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	2.1650635094611	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCGTTATCAAGTGTGAAG	51571002	True	NA	4	True	AATAAA	-20	NA	51571282	51592510	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_51571476_51573149_51573402_51581390_51581518_51581786_51581883_51586626
transcript_110652.known	chr19	+	664	2	FSM	ENSG00000269388.1	ENST00000598755.1	664	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACCTGGCCTTCCATGTG	NA	False	NA	9	True	AATAAA	-9	NA	51594560	51601788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_51594647_51601210
transcript_110654.known	chr19	+	964	4	FSM	ENSG00000182310.15	ENST00000572703.2	964	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	6.12825877028341	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTCTCCTTGACATTTC	51702891	True	NA	NA	False	NA	NA	NA	51702953	51705349	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_51703099_51703227_51703336_51704029_51704481_51705089
transcript_110655.known	chr19	+	660	4	FSM	ENSG00000182310.15	ENST00000573151.5	660	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	6.64997911442	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTTCATCTCCGAAGG	51703082	False	NA	8	True	AATAAA	-19	NA	51703144	51705190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_51703336_51704029_51704187_51704269_51704481_51705089
transcript_110657.known	chr19	-	2086	4	FSM	ENSG00000105509.11	ENST00000601714.5	2086	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1.24721912892465	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGCCTCCACCTTTTTG	NA	False	NA	-4	True	AATAAA	-18	NA	51719941	51713111	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_51714103_51716255_51716389_51716967_51717194_51719205
transcript_110664.nic	chr19	-	2371	11	Fusion	ENSG00000198093.11_ENSG00000161551.15	novel	1865	7	NA	NA	-12	0	intron_retention	FALSE	canonical	3	57	junction_1	87.5442745129572	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGGTTCCATTCTTTGT	-51898674	True	NA	1	True	NA	NA	NA	51905052	51855801	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr19_-_51855968_51860903_51860979_51877281_51877378_51878388_51878516_51880322_51880402_51880678_51880878_51890832_51891898_51896471_51896568_51896851_51896979_51900092_51900295_51904913
transcript_110674.known	chr19	-	8291	6	FSM	ENSG00000161551.15	ENST00000638348.2	8291	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	59.1283350010805	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAAGTTGTTTCTGATTCT	-51887444	True	NA	NA	False	AATAAA	-22	NA	51887951	51867047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_51873707_51877281_51877378_51878388_51878516_51880322_51880402_51880678_51880878_51886820
transcript_110677.known	chr19	-	3192	5	FSM	ENSG00000198093.11	ENST00000354957.8	3192	5	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	28.2699044922334	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATATCTCTATTTCCTGTG	-51898639	True	NA	-9	True	AATAAA	-15	NA	51905017	51889234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_51891898_51896471_51896568_51896851_51896979_51900092_51900295_51904913
transcript_110689.nic	chr19	-	2022	2	ISM	ENSG00000198093.11	ENST00000599530.1	730	3	-33	1560	-12	-1553	5prime_fragment	FALSE	canonical	3	310	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGAGTTCTGTGAGTCA	-51898674	True	NA	-1	True	AATAAA	-19	NA	51905052	51898411	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_51900295_51904913
transcript_110694.known	chr19	+	3165	6	FSM	ENSG00000176024.18	ENST00000293471.11	3165	6	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	18.4108663565841	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATTGGCCATGCTCTTAA	51926304	True	NA	NA	False	TATAAA	-41	NA	51927471	51946621	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_51927541_51929731_51929897_51936027_51936236_51940208_51940336_51940616_51940710_51944118
transcript_110697.known	chr19	+	542	5	FSM	ENSG00000176024.18	ENST00000600853.1	542	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	53.8162382557533	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGTCTGAAGAGAGTGGA	51926306	True	NA	NA	False	AAGAAA	-37	NA	51927473	51944165	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_51927541_51936027_51936236_51940208_51940336_51940616_51940710_51944118
transcript_110699.known	chr19	-	869	5	FSM	ENSG00000256683.7	ENST00000601430.5	869	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	23.1138486626524	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGAAAATTAGAGAAGCATCA	-51986324	True	NA	NA	False	AAAACA	-1	NA	51986856	51965855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_51966215_51968577_51968674_51969004_51969146_51974345_51974532_51986769
transcript_11070.nic	chr1	+	1921	8	NIC	ENSG00000143033.18	novel	1937	14	NA	NA	-3	0	intron_retention	FALSE	canonical	3	187	junction_3	161.734981007921	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAATCAGCGAAACTCTGT	93066777	True	NA	NA	False	NA	NA	NA	93079279	93120274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_93079532_93110229_93110429_93110544_93110631_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332
transcript_110703.known	chr19	-	1601	2	FSM	ENSG00000256683.7	ENST00000597555.1	1601	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	-51986273	True	NA	NA	False	NA	NA	NA	51986805	51972966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_51974532_51986769
transcript_110705.known	chr19	-	4075	7	FSM	ENSG00000197619.15	ENST00000598071.6	4075	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	8.77021474461525	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTTGTGTGAGCACAATT	-52007228	True	NA	-1	True	AATAAA	-26	NA	52008211	51991331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_51994838_52000345_52000379_52001812_52001909_52002154_52002282_52003696_52003901_52007292_52007331_52008140
transcript_110707.known	chr19	-	4020	6	FSM	ENSG00000197619.15	ENST00000594083.5	4020	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	6.46838465151849	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCTTTGTGTGAGCACAA	-52007213	True	NA	-3	True	AATAAA	-24	NA	52008196	51991333	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_51994838_52000345_52000379_52001812_52001909_52002154_52002282_52003696_52003901_52008140
transcript_110708.known	chr19	-	4122	6	FSM	ENSG00000197619.15	ENST00000599177.5	4122	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	14.4277510374971	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACAGGCTTTGTGTGAGC	-52007232	True	NA	-7	True	AATAAA	-20	NA	52008215	51991337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_51994838_52000258_52000379_52001812_52001909_52002154_52002282_52003696_52003901_52008140
transcript_110709.known	chr19	-	1031	6	FSM	ENSG00000142556.19	ENST00000595189.5	1031	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	50.4039680977599	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTGAGAAACCCCATGC	-52026018	True	NA	NA	False	ACTAAA	-31	NA	52028337	52017000	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_52017360_52017575_52017698_52018007_52018104_52018367_52018495_52025730_52025962_52028241
transcript_110710.known	chr19	-	4628	5	FSM	ENSG00000142556.19	ENST00000270649.11	4628	5	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	12.3970762682174	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACAGCTTTTGCTTTTGC	-52026060	True	NA	-5	True	AATAAA	-17	NA	52028379	52013323	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_52017360_52018007_52018104_52018367_52018495_52025730_52025962_52028241
transcript_110715.known	chr19	-	3819	6	FSM	ENSG00000197608.12	ENST00000594295.5	3819	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	3.49857113690718	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTAGCCTCAGGTATTTCT	-52092289	False	NA	-1	True	ATTAAA	-15	NA	52094105	52064465	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_52067611_52076043_52076173_52076957_52077085_52084786_52084879_52088936_52089003_52093845
transcript_110716.known	chr19	-	4637	5	FSM	ENSG00000256087.7	ENST00000221315.10	4637	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	2.73861278752583	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGCGAACGTTAAGTT	-52048331	True	NA	0	True	AATAAA	-27	NA	52048838	52031377	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_52035441_52040487_52040584_52041479_52041607_52046853_52047061_52048694
transcript_110719.known	chr19	-	2563	5	FSM	ENSG00000204611.7	ENST00000330123.9	2563	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	26.6211851727154	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTCCTACTTACTGATA	-52137349	False	NA	NA	False	NA	NA	NA	52139746	52114789	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_52117025_52122359_52122458_52123922_52124050_52130500_52130589_52139731
transcript_110723.known	chr19	-	4356	4	FSM	ENSG00000204611.7	ENST00000600228.6	4356	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	8.04155872120988	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGGTTTCTGTTTTTTT	-52137541	True	NA	-24	True	ATTAAA	-1	NA	52139938	52113090	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_52117025_52123922_52124050_52130500_52130589_52139731
transcript_110726.known	chr19	-	808	4	FSM	ENSG00000196267.14	ENST00000597065.1	808	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	2.49443825784929	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCCTTTCATTTCCCAT	-52170757	True	NA	0	True	AATAAA	-19	NA	52171643	52160320	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_52160592_52168057_52168153_52169647_52169782_52171335
transcript_110741.known	chr19	+	5352	15	FSM	ENSG00000105568.18	ENST00000322088.11	5352	15	0	0	0	0	multi-exon	FALSE	canonical	3	2849	junction_4	174.225296904992	11255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGCCTTCCCCGCTCTCT	52153322	True	NA	NA	False	AATAAA	-26	NA	52190051	52229518	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_52190175_52201943_52202035_52205962_52206064_52211259_52211493_52212685_52212834_52212954_52213111_52215778_52215894_52216003_52216075_52216528_52216664_52219690_52219865_52220188_52220250_52220978_52221134_52222098_52222242_52225716_52225809_52225964
transcript_11077.known	chr1	+	4046	16	FSM	ENSG00000143033.18	ENST00000545708.5	4046	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	208.157910144091	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGTTTTGCTTCTGTAT	93066732	True	NA	36	True	ATTAAA	-39	NA	93079234	93139079	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_93079532_93110229_93110247_93110326_93110429_93110544_93110627_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_110774.known	chr19	+	688	4	FSM	ENSG00000105568.18	ENST00000468280.5	688	4	0	0	0	0	multi-exon	FALSE	canonical	3	3062	junction_1	45.536310297998	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTCACTTAGGAATTGA	52153384	False	NA	NA	False	NA	NA	NA	52190113	52211694	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_52190175_52201943_52202035_52205962_52206064_52211259
transcript_110775.known	chr19	+	2921	6	FSM	ENSG00000167554.15	ENST00000403906.8	2921	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	3.42928563989645	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTCTACATGCCTCT	52335842	True	NA	3	True	NA	NA	NA	52336242	52367778	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_52336507_52347706_52347945_52349153_52349236_52353681_52353809_52354250_52354380_52365697
transcript_110779.known	chr19	+	4746	5	FSM	ENSG00000198464.14	ENST00000595962.6	4746	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	22.3313120975907	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCACACCTTGTAAAACAT	52294416	True	NA	6	True	AATAAA	-18	NA	52297168	52325922	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_52297224_52300393_52300485_52314152_52314280_52315833_52315963_52321578
transcript_11078.known	chr1	+	1951	14	FSM	ENSG00000143033.18	ENST00000370303.4	1951	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	212.338988774662	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGATGATACTAGCCTTAA	93066808	True	NA	-51	True	AAAAAG	-19	NA	93079310	93137151	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_93079532_93110229_93110429_93110544_93110627_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_110782.known	chr19	+	6282	4	FSM	ENSG00000196214.11	ENST00000439461.6	6282	4	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	40.6147209217982	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTCTTTGATTTCT	52264932	True	NA	20	True	AATAAA	-22	NA	52269586	52296046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_52269632_52282110_52282238_52283284_52283414_52290065
transcript_110788.known	chr19	+	554	3	FSM	ENSG00000196214.11	ENST00000593703.1	554	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	134	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTGGTAAAACCGTCAG	52264932	True	NA	NA	False	GATAAA	-16	NA	52269586	52290445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_52269632_52283284_52283414_52290065
transcript_11079.known	chr1	+	4075	15	FSM	ENSG00000143033.18	ENST00000370298.9	4075	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	171.839091796331	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTGCTTCTG	93066780	True	NA	33	True	ATTAAA	-36	NA	93079282	93139076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_93079532_93110229_93110429_93110544_93110627_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_110790.known	chr19	+	2527	6	FSM	ENSG00000198464.14	ENST00000468240.6	2527	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	52.0822426552467	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTCACACCTTGTAAAA	52294424	True	NA	3	True	AATAAA	-15	NA	52297176	52325919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_52297224_52300393_52300485_52314152_52314280_52315833_52315963_52321578_52323675_52325882
transcript_110791.known	chr19	+	558	5	FSM	ENSG00000221923.9	ENST00000424032.6	558	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	130.044944153935	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGTAAACATGTCGAAAAAC	52366941	True	NA	-93	True	NA	NA	NA	52369916	52383969	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_52369978_52373110_52373238_52374298_52374428_52379420_52379541_52383848
transcript_110793.known	chr19	+	496	4	FSM	ENSG00000221923.9	ENST00000344085.9	496	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	133.658769509025	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGATTGAAGTTTGTTT	52366963	True	NA	9	True	AATAAA	-17	NA	52369938	52374717	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_52369978_52373110_52373238_52374298_52374395_52374483
transcript_110794.known	chr19	+	953	4	FSM	ENSG00000221923.9	ENST00000600321.5	953	4	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_3	67.4405087630737	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAATAGAGACAGGTTTT	52366960	True	NA	NA	False	NA	NA	NA	52369935	52380075	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_52369978_52373110_52373238_52374298_52374428_52379420
transcript_110795.known	chr19	+	2258	4	FSM	ENSG00000221923.9	ENST00000422689.3	2258	4	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_3	97.6296858314906	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTACTTTACATTTTATGA	52366947	True	NA	20	True	ATTAAA	-30	NA	52369922	52385795	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_52369978_52373110_52373238_52374298_52374428_52383848
transcript_11080.known	chr1	+	1038	2	FSM	ENSG00000143033.18	ENST00000468457.1	1038	2	0	0	0	0	multi-exon	FALSE	canonical	3	680	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAATCAGCGAAACTCTGT	93118299	False	NA	NA	False	NA	NA	NA	93118344	93120274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_93118441_93119332
transcript_110802.known	chr19	+	3994	7	FSM	ENSG00000167555.14	ENST00000360465.8	3994	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	7.04745817062199	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGAATGAATCGTGTTTT	52397308	True	NA	NA	False	AATAAA	-17	NA	52397848	52418401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_52397905_52398366_52398620_52401684_52401754_52401946_52402029_52405906_52406034_52406514_52406644_52415123
transcript_110806.known	chr19	+	465	5	FSM	ENSG00000167555.14	ENST00000436397.5	465	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	7.36545993132812	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGTTCTCTCAGGAAGAG	52397327	True	NA	NA	False	NA	NA	NA	52397867	52405934	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_52397901_52398366_52398620_52401684_52401754_52401946_52402029_52405906
transcript_110807.known	chr19	+	814	4	FSM	ENSG00000258405.11	ENST00000601120.1	814	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	6.37704215656966	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGGAGAAAAACAATATAAAT	52490223	True	NA	NA	False	NA	NA	NA	52492829	52511142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_52492864_52501826_52501909_52504654_52504782_52510571
transcript_110810.known	chr19	+	740	3	FSM	ENSG00000288253.1	ENST00000594118.5	740	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTCTGTATTTTCATTTT	52453288	True	NA	NA	False	NA	NA	NA	52453579	52458507	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_52453608_52456867_52456959_52457886
transcript_110811.known	chr19	+	3585	5	FSM	ENSG00000198482.14	ENST00000359798.9	3585	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	3.34477204006491	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTGAGATGGAGTGTC	52526754	True	NA	NA	False	NA	NA	NA	52527667	52556336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_52527712_52532907_52533010_52543265_52543348_52547511_52547639_52553106
transcript_110814.known	chr19	+	608	4	FSM	ENSG00000198482.14	ENST00000465448.5	608	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	8.28653526310404	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGTCTACCAGTGATGC	52526749	True	NA	NA	False	NA	NA	NA	52527662	52553456	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_52527712_52543265_52543348_52547511_52547639_52553106
transcript_110816.known	chr19	+	5230	4	FSM	ENSG00000167562.14	ENST00000391785.8	5230	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	9.46337971105226	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTGTAATTTATAATGTA	52568093	True	NA	5	True	AATAAA	-16	NA	52570286	52587174	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_52570331_52574076_52574163_52575894_52576022_52582201
transcript_110826.known	chr19	-	2726	4	FSM	ENSG00000167766.20	ENST00000536937.6	2680	4	-36	-10	-3	10	multi-exon	FALSE	canonical	3	46	junction_1	18.7082869338697	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGTTACTAATCTAAGAT	-52637247	True	NA	-15	True	AATAAA	-26	NA	52638391	52612366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_52614798_52618935_52619063_52635065_52635154_52638311
transcript_110827.known	chr19	-	728	3	FSM	ENSG00000167766.20	ENST00000601237.5	728	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	15	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGGTCAGGAGATCGAGA	-52637244	True	NA	NA	False	NA	NA	NA	52638388	52618499	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_52619063_52635065_52635154_52638311
transcript_110832.known	chr19	-	577	6	FSM	ENSG00000213020.10	ENST00000640952.1	577	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	4.31740662898458	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGTGTCAAGAAGATGAAAG	-52734041	True	NA	NA	False	AAGAAA	-18	NA	52735011	52706709	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_52706865_52714014_52714142_52715831_52715914_52728729_52728832_52729905_52730006_52735000
transcript_110833.known	chr19	-	4417	5	FSM	ENSG00000213020.10	ENST00000540744.5	4417	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	3.90512483795333	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTAGTCTGTTTTTCAG	-52734084	True	NA	-6	True	ACTAAA	-19	NA	52735054	52702812	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_52706865_52714014_52714142_52715831_52715914_52728729_52728832_52735000
transcript_110839.known	chr19	-	3645	4	FSM	ENSG00000189190.11	ENST00000648973.1	3645	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	8.83176086632785	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAATCTGTCTCAAAAAAAA	-52785867	True	NA	NA	False	NA	NA	NA	52786807	52764549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_52767773_52774574_52774702_52778825_52778908_52786594
transcript_110842.known	chr19	-	3829	3	FSM	ENSG00000189190.11	ENST00000338230.3	3829	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	14.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTAAAAATGCTTTTGTTC	-52785823	True	NA	NA	False	ATTAAA	-7	NA	52786763	52764194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_52767773_52778825_52778908_52786594
transcript_110845.nic	chr19	-	4711	5	NIC	ENSG00000198538.11	novel	684	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_2	27.3986769753578	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGATGAGTTCGATTTC	NA	False	NA	-9	True	AATAAA	-21	NA	52821669	52797408	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_52801703_52805144_52805263_52808006_52808134_52817943_52818032_52821585
transcript_110847.known	chr19	-	4027	5	FSM	ENSG00000204604.13	ENST00000243639.8	4027	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	30.7113578338699	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATTTGGATGAGTTTGAT	-52855971	True	NA	-5	True	AATAAA	-18	NA	52857649	52838535	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_52842152_52845178_52845297_52849086_52849214_52854257_52854346_52857571
transcript_110848.nic	chr19	-	4164	5	NIC	ENSG00000204604.13	novel	4027	5	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	52	junction_2	28.235615806991	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATTTGGATGAGTTTGA	-52855972	True	NA	-6	True	AATAAA	-17	NA	52857650	52838536	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_52842152_52849086_52849214_52853871_52854127_52854257_52854346_52857571
transcript_110851.known	chr19	-	4558	4	FSM	ENSG00000198538.11	ENST00000457749.7	4558	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	43.3922676163495	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATGAGTTCGATTTCT	-52821580	True	NA	-8	True	AATAAA	-22	NA	52821633	52797407	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_52801703_52808006_52808134_52817943_52818032_52821585
transcript_110852.known	chr19	-	4405	4	FSM	ENSG00000204604.13	ENST00000595646.6	4405	4	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	15.7550697307953	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCTGAACAGGGTCTAG	-52855941	True	NA	NA	False	AATAAA	-21	NA	52857619	52838009	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_52842152_52849086_52849214_52854257_52854346_52857571
transcript_11086.known	chr1	+	4552	28	FSM	ENSG00000122483.18	ENST00000401026.7	4552	28	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	20.5455097240656	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAGCCCTTCTAAAAC	93180301	False	NA	NA	False	AATAAA	-21	NA	93180362	93278607	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_93180883_93183359_93183496_93183977_93184147_93186344_93186504_93191999_93192107_93193615_93193745_93201891_93201989_93205509_93205632_93207106_93207399_93210801_93210927_93212100_93212262_93214742_93214967_93216635_93216747_93217737_93217870_93221608_93221744_93221858_93221937_93226332_93226450_93232425_93232594_93236247_93236391_93239309_93239474_93239682_93239897_93246104_93246205_93246837_93246955_93254470_93254615_93256334_93256539_93258747_93258886_93264700_93264902_93278462
transcript_110879.known	chr19	-	6331	6	FSM	ENSG00000182986.15	ENST00000682928.1	6331	6	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_4	16.6084315936214	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTATTATTCCATCTTCTT	-52894835	True	NA	-12	True	ATTAAA	-15	NA	52897635	52876179	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_52881984_52888126_52888254_52890240_52890329_52891228_52891347_52893778_52893857_52897519
transcript_110884.known	chr19	-	598	5	FSM	ENSG00000182986.15	ENST00000593618.5	598	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	20.5472017559569	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCGATATGATCAAAGGCAT	-52894884	True	NA	NA	False	AATAAA	-21	NA	52897684	52881755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_52881984_52888126_52888254_52890240_52890329_52891228_52891347_52897647
transcript_110889.known	chr19	-	4195	5	FSM	ENSG00000213793.6	ENST00000638862.2	4144	5	-53	2	-11	-2	multi-exon	FALSE	canonical	1	1	junction_3	16.6883192682786	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCAGTGTCTGAGAGGTT	-52922712	True	NA	-3	True	AATAAA	-15	NA	52923481	52904416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_52908180_52915195_52915323_52917858_52917932_52918818_52918938_52923368
transcript_110892.known	chr19	-	553	4	FSM	ENSG00000180257.14	ENST00000457013.6	553	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	17.5941909605289	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGTGGCAAGAAGTTGAA	-52962139	True	NA	NA	False	AAGAAA	-20	NA	52962911	52951431	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_52951585_52952750_52952878_52956026_52956105_52962716
transcript_110893.known	chr19	-	2990	4	FSM	ENSG00000242779.7	ENST00000270443.8	2990	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	6.68331255192114	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGGCATTTCATTTCT	-52993184	True	NA	-9	True	AATATA	-17	NA	52993524	52968250	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_52970843_52980891_52980973_52986574_52986847_52993479
transcript_110898.known	chr19	-	529	3	FSM	ENSG00000180257.14	ENST00000535506.5	529	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	21.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGACTCTTCTTTGGAGTG	-52962106	True	NA	NA	False	NA	NA	NA	52962878	52952588	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_52952878_52956026_52956105_52962716
transcript_110906.nnic	chr19	-	4391	8	NIC	ENSG00000170949.18	novel	4336	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	71	junction_6	44.0611819530757	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATGAATCACATTCTTT	-53101497	True	NA	NA	False	AATAAA	-19	NA	53103434	53066614	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_53070263_53074139_53074269_53075056_53075184_53085162_53085219_53086261_53086322_53091412_53091530_53091636_53091721_53103264
transcript_110912.known	chr19	-	4336	7	FSM	ENSG00000170949.18	ENST00000429604.5	4336	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	57.5077289491499	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAATCACATTCTTTC	-53101497	True	NA	NA	False	AATAAA	-20	NA	53103434	53066613	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_53070263_53074139_53074269_53075056_53075184_53086261_53086322_53091412_53091530_53091636_53091721_53103264
transcript_110917.known	chr19	-	1926	6	FSM	ENSG00000170949.18	ENST00000599247.5	1926	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	65.7419196555744	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATTCATTCTGGAGAGAA	-53101456	True	NA	NA	False	NA	NA	NA	53103393	53068865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_53070263_53074139_53074269_53075056_53075184_53086261_53086322_53091636_53091721_53103264
transcript_110918.known	chr19	-	4431	6	FSM	ENSG00000170949.18	ENST00000683776.1	4431	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	57.4337879649253	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAATCACATTCTTTC	-53101485	True	NA	NA	False	AATAAA	-20	NA	53103422	53066613	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_53070263_53074139_53074269_53075056_53075184_53086261_53086322_53091412_53091721_53103264
transcript_11092.known	chr1	-	2062	11	FSM	ENSG00000223745.8	ENST00000661111.1	2062	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	10.0004999875006	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATCTATATAGCCCCAGAA	-93344969	True	NA	-69	True	NA	NA	NA	93345848	93264704	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_93264773_93305387_93305471_93311489_93311609_93324634_93324730_93325768_93325896_93337376_93337513_93338229_93339275_93339356_93339537_93339648_93339680_93340457_93340511_93345723
transcript_110921.known	chr19	-	583	5	FSM	ENSG00000170949.18	ENST00000596966.5	583	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	42.39914503855	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCTGTGTAAACCATGATAA	-53101479	True	NA	NA	False	NA	NA	NA	53103416	53085939	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_53086110_53086261_53086322_53091412_53091530_53091636_53091721_53103264
transcript_110925.known	chr19	-	589	5	FSM	ENSG00000170954.12	ENST00000601110.5	589	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	20.2036506602149	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAACAAAGTGACTACGGC	-53131836	True	NA	NA	False	AATACA	-38	NA	53132904	53109726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_53109909_53116312_53116434_53122661_53122744_53123500_53123656_53132855
transcript_110928.known	chr19	-	2402	4	FSM	ENSG00000170954.12	ENST00000421033.5	2402	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	16.3571255285137	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGTTGTCTCAGATTTTA	-53131850	True	NA	-2	True	ATTAAA	-22	NA	53132918	53107879	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_53109909_53116312_53116434_53122661_53122744_53132748
transcript_110929.known	chr19	-	2288	4	FSM	ENSG00000170954.12	ENST00000243643.9	2288	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	7.78888096369861	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTGTCTCAGATTTTAA	-53131842	True	NA	-1	True	ATTAAA	-23	NA	53132910	53107878	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_53109909_53116312_53116434_53122661_53122744_53132855
transcript_110932.known	chr19	-	604	3	FSM	ENSG00000197937.13	ENST00000595710.1	604	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	7.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCTCCCTCCTCATGTA	-53158506	True	NA	NA	False	NA	NA	NA	53159075	53148891	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_53149368_53153732_53153794_53159008
transcript_110935.known	chr19	-	4158	4	FSM	ENSG00000197497.11	ENST00000396424.5	4158	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	3.2659863237109	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGAATGAATCATTTCTT	-53193025	True	NA	NA	False	AATAAA	-19	NA	53193358	53162423	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_53166348_53175444_53175572_53182883_53182944_53193311
transcript_110942.known	chr19	+	197	3	ISM	ENSG00000269001.3	ENST00000691047.1	2921	5	73	9360	73	-337	5prime_fragment	FALSE	canonical	3	6	junction_2	2.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGGAGTGGAAATGCCTG	53196657	False	NA	NA	False	NA	NA	NA	53197185	53204055	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_53197263_53200623_53200704_53204015
transcript_110946.known	chr19	-	3512	5	FSM	ENSG00000197928.11	ENST00000598513.6	3512	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	104.633885524719	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATCGTGTGCCTTCCGTC	-53251883	True	NA	NA	False	AGTAAA	-27	NA	53254873	53235380	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_53238558_53243743_53243898_53251535_53251606_53253085_53253157_53254833
transcript_110952.nic	chr19	-	3838	5	NIC	ENSG00000197928.11	novel	796	5	NA	NA	0	-1	intron_retention	FALSE	canonical	3	48	junction_1	119.031508433692	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGATGGAAAGCCTGTG	-53251883	True	NA	-10	True	AATAAA	-19	NA	53254873	53238597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_53241866_53243743_53243898_53251535_53251606_53253085_53253157_53254598
transcript_110953.known	chr19	-	796	5	FSM	ENSG00000197928.11	ENST00000599012.5	796	5	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	108.68417548107	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACATTTTTAAAGTTCAGT	-53251870	True	NA	NA	False	NA	NA	NA	53254860	53241391	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_53241866_53243743_53243898_53251535_53251606_53253085_53253157_53254833
transcript_110954.known	chr19	-	935	5	FSM	ENSG00000197928.11	ENST00000594681.5	935	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	123.057913195373	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACACATTCCTAGAGTCTG	-53251841	True	NA	NA	False	AAAAAG	-11	NA	53254831	53241923	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_53242331_53243743_53243898_53251535_53251606_53253085_53253157_53254598
transcript_110955.nic	chr19	-	753	5	NIC	ENSG00000197928.11	novel	935	5	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	113.52752970095	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACACATTCCTAGAGTCTG	-53251894	True	NA	NA	False	AAAAAG	-11	NA	53254884	53241923	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_53242331_53243743_53243898_53251535_53251606_53253085_53253157_53254833
transcript_110956.nic	chr19	-	1087	5	NIC	ENSG00000197928.11	novel	935	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_1	115.452100457289	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACACATTCCTAGAGTCTG	-53251883	True	NA	NA	False	AAAAAG	-11	NA	53254873	53241923	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_53242441_53243743_53243898_53251535_53251606_53253085_53253157_53254598
transcript_110957.known	chr19	-	701	5	FSM	ENSG00000197928.11	ENST00000598806.5	701	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	104.300946783814	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGCCTGTAATACCAGCT	-53251889	True	NA	NA	False	AATACA	-23	NA	53254879	53242080	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_53242441_53243743_53243898_53251535_53251606_53253085_53253157_53254833
transcript_110960.known	chr19	-	706	4	FSM	ENSG00000197928.11	ENST00000601413.5	706	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_3	104.455200391789	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGACGAGTGGTGGTTC	-53251831	True	NA	NA	False	TTTAAA	-35	NA	53254821	53243555	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_53243898_53251535_53251606_53253085_53253157_53254598
transcript_110962.known	chr19	-	719	4	FSM	ENSG00000197928.11	ENST00000601828.5	719	4	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_3	77.1275999021535	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTTCGTAGCTGAACAAA	-53251856	True	NA	NA	False	NA	NA	NA	53254846	53243332	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_53243898_53251535_53251606_53253085_53253157_53254833
transcript_110965.known	chr19	-	3207	1	FSM	ENSG00000197928.11	ENST00000599328.1	3207	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGATGGAAAGCCTGTGG	-53241776	False	NA	-9	True	AATAAA	-20	NA	53241803	53238596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_53238600_53241800
transcript_110966.known	chr19	+	496	3	FSM	ENSG00000189348.6	ENST00000599085.1	496	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGCAAAGCCCAGACCAC	NA	False	NA	NA	False	NA	NA	NA	53282289	53284349	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53282327_53282808_53282918_53283999
transcript_110968.known	chr19	+	6348	4	FSM	ENSG00000213799.13	ENST00000458035.3	6348	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	19.2527054375915	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACAGCGAGACTCTGTCT	53332273	True	NA	NA	False	NA	NA	NA	53333748	53356906	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53333793_53341234_53341323_53345505_53345633_53350817
transcript_11097.nic	chr1	+	1024	8	ISM	ENSG00000122483.18	ENST00000690025.1	4752	29	-37	73160	-29	-11109	5prime_fragment	FALSE	canonical	3	50	junction_1	8.74817765279706	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTACAAGAAAGGTGTGGT	93178352	True	NA	NA	False	AATAAA	-2	NA	93180686	93205570	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_93180853_93183359_93183496_93183977_93184147_93186344_93186504_93191999_93192107_93193615_93193745_93201891_93201989_93205509
transcript_110972.known	chr19	+	6133	4	FSM	ENSG00000203326.12	ENST00000474037.6	6133	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	13.490737563232	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAAATGATGTAATTCCAT	53363622	True	NA	8	True	AATAAA	-28	NA	53365704	53386590	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53365760_53372214_53372297_53375769_53375897_53380721
transcript_110973.known	chr19	+	1868	4	FSM	ENSG00000203326.12	ENST00000475179.5	1868	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	20.8326666559997	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAAAAGTCAAATGATG	53363630	True	NA	-1	True	AATAAA	-19	NA	53365712	53386581	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53365760_53372214_53372297_53375769_53375897_53384969
transcript_110974.known	chr19	+	4572	4	FSM	ENSG00000196417.13	ENST00000396408.8	4572	4	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	26.2339898266013	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGATGAGTTTGATTTCT	53391702	True	NA	24	True	AATATA	-22	NA	53395148	53412009	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53395194_53397942_53398031_53402064_53402192_53407697
transcript_110976.known	chr19	+	7588	4	FSM	ENSG00000196417.13	ENST00000594030.2	7588	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	48.3804368176504	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTCTAAATTTTATTATT	53391726	True	NA	4	True	AATAAA	-17	NA	53395172	53430413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53395194_53397942_53398031_53402064_53402192_53423061
transcript_110982.known	chr19	+	938	6	FSM	ENSG00000160336.17	ENST00000610928.4	938	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	124.994399874554	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGTGTGTCCTTAAGGC	53428972	True	NA	12	True	AATAAA	-22	NA	53431992	53450331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53432029_53445000_53445124_53446226_53446338_53447195_53447284_53449511_53449639_53449878
transcript_110991.nic	chr19	+	840	5	NIC	ENSG00000160336.17	novel	938	6	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_4	116.440972170452	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGTGTGTCCTTAAGGC	53428947	True	NA	12	True	AATAAA	-22	NA	53431967	53450331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_53432029_53446226_53446338_53447195_53447284_53449511_53449639_53449878
transcript_110992.known	chr19	+	3983	5	FSM	ENSG00000160336.17	ENST00000684525.1	3983	5	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	97.2969038561865	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATGAGTTTTATTTCC	53428963	True	NA	29	True	AATATA	-22	NA	53431983	53458261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53432029_53446226_53446338_53447195_53447284_53449511_53449639_53454649
transcript_111.known	SIRV3	+	2373	3	FSM	SIRV3A	SIRV306	2373	3	0	0	0	0	multi-exon	FALSE	canonical	3	864	junction_2	1416.5	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACCTAACAGTAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	1944	8292	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV3_+_2006_4003_4081_6057
transcript_111006.known	chr19	+	6153	4	FSM	ENSG00000198346.11	ENST00000396403.9	6153	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	47.4856703531591	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCATAGAGTACCTTAATT	53465430	True	NA	16	True	AATAAA	-18	NA	53467732	53496255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53467790_53483749_53483838_53486631_53486759_53490374
transcript_111011.nnic	chr19	+	3038	3	NNC	ENSG00000241015.2	novel	2920	2	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	7.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATACTTTGTCTCTGTGTCT	53428949	True	NA	26	True	NA	NA	NA	53431969	53444668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_53432029_53439827_53439934_53441795
transcript_111012.known	chr19	+	2920	2	FSM	ENSG00000241015.2	ENST00000424846.3	2920	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGTCTCTGTGTCTTA	53428963	True	NA	28	True	NA	NA	NA	53431983	53444670	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53432029_53441795
transcript_111016.known	chr19	+	2711	8	FSM	ENSG00000130844.19	ENST00000649326.1	2711	8	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_3	94.1106600047551	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTCAACTGCAGTTCAAAAA	53521324	False	NA	-34	True	NA	NA	NA	53521335	53578017	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53522085_53522616_53522685_53523263_53523497_53539215_53539283_53555844_53555909_53569303_53569386_53571603_53571731_53576696
transcript_111020.known	chr19	+	5042	7	FSM	ENSG00000130844.19	ENST00000253144.13	5042	7	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_2	44.2681224660214	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTGTTGGATATTCAA	53516951	True	NA	14	True	AATAAA	-17	NA	53521023	53580269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53522085_53522616_53522685_53539215_53539283_53555844_53555909_53569303_53569386_53571603_53571731_53576696
transcript_111025.known	chr19	+	1985	7	FSM	ENSG00000130844.19	ENST00000511593.6	1985	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	100.36378275498	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTGCCCTTCTGAGTAG	53521837	False	NA	30	True	AATAAA	-18	NA	53521855	53578081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53522085_53522616_53522685_53555844_53555909_53563762_53563793_53569303_53569386_53571603_53571731_53576696
transcript_111028.known	chr19	+	4065	6	FSM	ENSG00000130844.19	ENST00000449416.6	4065	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	80.7415630267336	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTGTTGGATATTCAA	53537750	True	NA	14	True	AATAAA	-17	NA	53538144	53580269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53538297_53539215_53539283_53555844_53555909_53569303_53569386_53571603_53571731_53576696
transcript_111033.known	chr19	+	2120	5	FSM	ENSG00000130844.19	ENST00000511154.5	2120	5	0	0	0	0	multi-exon	FALSE	canonical	2	41	junction_1	103.765059148058	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAGAAAAAAAT	53537748	True	NA	NA	False	AATGAA	-21	NA	53538142	53578386	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53538297_53539215_53539283_53569303_53569386_53571603_53571731_53576696
transcript_111036.known	chr19	+	3908	5	FSM	ENSG00000130844.19	ENST00000648511.1	3908	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	107.979164656891	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTGTTGGATATTCAA	53554732	False	NA	14	True	AATAAA	-17	NA	53554826	53580269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53554889_53555844_53555909_53569303_53569386_53571603_53571731_53576696
transcript_111037.known	chr19	+	2161	5	FSM	ENSG00000130844.19	ENST00000512387.6	2161	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	96.2896022424021	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAGAAAAAAATCAT	53554404	True	NA	NA	False	AATGAA	-24	NA	53554498	53578389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53554694_53555844_53555909_53569303_53569386_53571603_53571731_53576696
transcript_11104.nic	chr1	+	963	7	ISM	ENSG00000122483.18	ENST00000690025.1	4752	29	-37	76742	-29	8328	5prime_fragment	FALSE	canonical	3	50	junction_1	9.32737905308882	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAAGGCAGTTGTGCAAA	93178352	True	NA	15	True	TATAAA	-28	NA	93180686	93201988	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_93180853_93183359_93183496_93183977_93184147_93186344_93186504_93191999_93192107_93193615_93193745_93201891
transcript_111044.known	chr19	+	572	3	FSM	ENSG00000130844.19	ENST00000649816.1	572	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	86.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTGTCCCAATTTTTAA	53521814	False	NA	-32	True	NA	NA	NA	53521832	53523515	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53522085_53522616_53522685_53523263
transcript_111045.known	chr19	+	387	1	FSM	ENSG00000269564.1	ENST00000597420.1	387	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTGTTTCTGGTCTATT	53788198	False	NA	13	True	AATAAA	-13	NA	53788781	53789168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53788800_53789200
transcript_111050.known	chr19	-	3635	10	FSM	ENSG00000142405.22	ENST00000391773.6	3635	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_9	6.87633264300702	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGCGGGCACCTGTA	-53824260	False	55	-13	True	AATAAA	-16	NA	53824314	53793742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_53794137_53795858_53796030_53798242_53798414_53801226_53801398_53803951_53804123_53805279_53805451_53807494_53807669_53809586_53811289_53814907_53814989_53823885
transcript_111051.nnic	chr19	-	4426	10	NNC	ENSG00000142405.22	novel	3634	10	NA	NA	-10825	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_7	3.16227766016838	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGCGGGCACCTGTA	-53835209	False	NA	-13	True	AATAAA	-16	NA	53835219	53793742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_53794137_53795858_53796030_53798242_53798414_53801226_53801398_53803951_53804123_53805279_53805451_53807494_53807666_53809586_53811289_53814907_53814989_53833996
transcript_111054.known	chr19	-	3465	9	FSM	ENSG00000142405.22	ENST00000391775.7	3465	9	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_2	6.7349368965121	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGGCGGGCACCTGTAG	-53824263	False	55	-12	True	AATAAA	-17	NA	53824317	53793741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_53794137_53795858_53796030_53801226_53801398_53803951_53804123_53805279_53805451_53807494_53807666_53809586_53811289_53814907_53814989_53823885
transcript_111056.known	chr19	+	1579	3	FSM	ENSG00000179820.16	ENST00000421337.6	1579	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	115.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTTTCTTTTCTTTTT	53865148	True	NA	NA	False	NA	NA	NA	53866152	53874756	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53866418_53869753_53869839_53873527
transcript_111058.known	chr19	+	3054	3	FSM	ENSG00000179820.16	ENST00000391770.9	3054	3	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	105	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTGTGCTTTCTTAATG	53863197	True	NA	15	True	TATAAA	-11	NA	53867882	53876435	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53867944_53869753_53869839_53873527
transcript_111060.known	chr19	+	3186	3	FSM	ENSG00000179820.16	ENST00000391769.2	3186	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	146	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTGTGCTTTCTTAATG	53869380	False	NA	15	True	TATAAA	-11	NA	53869405	53876435	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53869599_53869753_53869839_53873527
transcript_111063.known	chr19	+	2997	19	FSM	ENSG00000126583.12	ENST00000682028.1	2997	19	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_7	13.7163730223733	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTCTCCCACCCGGCCA	53881162	True	NA	-47	True	NA	NA	NA	53882188	53907594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53882665_53883162_53883195_53884160_53884244_53889637_53889750_53889885_53890018_53891673_53891831_53892508_53892644_53892987_53893076_53893361_53893392_53897958_53898112_53898439_53898629_53900232_53900325_53900418_53900482_53900610_53900750_53903072_53903154_53904634_53904743_53906316_53906458_53906706_53906892_53906993
transcript_111064.known	chr19	+	3149	18	FSM	ENSG00000126583.12	ENST00000263431.4	3149	18	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_7	13.5250632397833	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGGATATTTTCTTGT	53881170	True	NA	11	True	AATAAA	-21	NA	53882196	53907652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53882665_53883162_53883195_53884160_53884244_53889637_53889750_53889885_53890018_53891673_53891831_53892508_53892644_53892987_53893076_53893361_53893392_53897958_53898112_53898439_53898629_53900232_53900325_53900418_53900482_53900610_53900750_53903072_53903154_53904634_53904743_53906316_53906458_53906706
transcript_111067.nnic	chr19	+	2955	18	NIC	ENSG00000126583.12	novel	2997	19	NA	NA	0	2	intron_retention	FALSE	canonical	2	12	junction_7	15.0217834906097	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTGTTTGGATATTTTC	53881170	True	NA	7	True	AATAAA	-17	NA	53882196	53907648	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_53882665_53883162_53883195_53884160_53884244_53889637_53889750_53889885_53890018_53891673_53891831_53892508_53892644_53893361_53893392_53897958_53898112_53898439_53898629_53900232_53900325_53900418_53900482_53900610_53900750_53903072_53903154_53904634_53904743_53906316_53906458_53906706_53906892_53906993
transcript_111073.known	chr19	+	2037	16	FSM	ENSG00000126583.12	ENST00000682268.1	2037	16	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_15	17.3980841857181	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAGAAAACCAAGGTTCAAA	53881170	True	NA	NA	False	AATACA	-4	NA	53882196	53903441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53882665_53883162_53883195_53884160_53884244_53889637_53889750_53889885_53890018_53891673_53891831_53892508_53892644_53892987_53893076_53893361_53893392_53897958_53898112_53898439_53898629_53900232_53900325_53900418_53900482_53900610_53900750_53903072_53903154_53903358
transcript_111086.known	chr19	+	2754	6	FSM	ENSG00000105605.8	ENST00000391767.6	2754	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	6.27375485654325	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACGTAGAGTACTGTTACT	53907638	True	NA	19	True	AATAAA	-25	NA	53909277	53943950	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53909518_53912802_53913028_53914499_53914587_53915364_53915506_53941469_53941616_53942035
transcript_111088.nnic	chr19	+	2273	5	NIC	ENSG00000105605.8	novel	2754	6	NA	NA	41	-237	combination_of_known_splicesites	FALSE	canonical	2	5	junction_4	4.81534007106456	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTCTCCGCCTGCCCGGA	53907736	True	NA	32	True	AATAAA	-13	NA	53909375	53943713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_53909518_53912802_53913028_53914499_53914587_53915364_53915506_53942035
transcript_111089.nnic	chr19	+	2504	5	NIC	ENSG00000105605.8	novel	2754	6	NA	NA	41	-6	combination_of_known_splicesites	FALSE	canonical	2	5	junction_4	4.81534007106456	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGACCACGTAGAGTACT	53907736	True	NA	13	True	AATAAA	-19	NA	53909375	53943944	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_53909518_53912802_53913028_53914499_53914587_53915364_53915506_53942035
transcript_111092.known	chr19	+	2501	4	FSM	ENSG00000130433.8	ENST00000252729.7	2501	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.816496580927726	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTTTGCTTTGGAGTCTA	53991625	True	NA	22	True	ATTAAA	-16	NA	53991636	54012666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_53993209_53998238_53998314_53999633_53999772_54011950
transcript_111096.nnic	chr19	+	1746	2	Antisense	novelGene_ENSG00000170909.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	13	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTAATTTGACCACTTCA	NA	False	NA	NA	False	AATAAA	-17	NA	54095724	54098157	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr19_+_54096167_54096853
transcript_111098.nic	chr19	+	1874	14	NIC	ENSG00000105618.14	novel	1833	14	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	202.208955139137	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCCTTGGGGAGTGATC	54102543	True	NA	15	True	ATTAAA	-16	NA	54115742	54131713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_54115798_54118240_54118456_54118572_54118634_54121859_54121944_54122496_54122595_54123453_54123561_54123748_54123919_54124498_54124657_54126527_54126618_54128072_54128201_54128304_54128378_54129056_54129186_54129271_54129371_54131306
transcript_11111.nic	chr1	+	865	6	ISM	ENSG00000122483.18	ENST00000690025.1	4752	29	-37	84987	-29	83	5prime_fragment	FALSE	canonical	3	50	junction_1	10.1705457080729	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATGTGTTTTTAAAGCAA	93178352	True	NA	NA	False	ATTAAA	-36	NA	93180686	93193743	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_93180853_93183359_93183496_93183977_93184147_93186344_93186504_93191999_93192107_93193615
transcript_111115.known	chr19	-	774	6	FSM	ENSG00000105619.14	ENST00000391757.1	774	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	84.8966430431734	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGCCACCGTCTACTTG	-54113915	True	NA	-7	True	AATAAA	-16	NA	54115288	54107019	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_54107170_54108025_54108208_54108325_54108396_54110050_54110122_54114441_54114701_54115246
transcript_111117.known	chr19	-	1180	6	FSM	ENSG00000105619.14	ENST00000391759.6	1180	6	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_5	29.4957624075053	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGCCACCGTCTACTTG	NA	False	NA	-7	True	AATAAA	-16	NA	54115657	54107019	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_54107170_54108025_54108245_54108325_54108396_54110050_54110122_54114441_54114701_54115246
transcript_111120.known	chr19	-	737	5	FSM	ENSG00000105619.14	ENST00000420715.6	737	5	0	0	0	0	multi-exon	TRUE	canonical	1	6	junction_3	94.578010129205	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGCCACCGTCTACTTG	-54113912	True	NA	-7	True	AATAAA	-16	NA	54115285	54107019	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_54107170_54108025_54108245_54108325_54108396_54114441_54114701_54115246
transcript_111122.known	chr19	+	379	4	FSM	ENSG00000170906.16	ENST00000303553.5	379	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	1589.30788570231	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCGAACGTGAGCATGTG	54086690	True	NA	13	True	AATAAA	-15	NA	54102884	54106961	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54102960_54103113_54103189_54105933_54106012_54106810
transcript_111123.known	chr19	+	338	4	FSM	ENSG00000170906.16	ENST00000391763.3	338	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	1612.80624998789	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAACGTGAGCATGTGTGTG	54086674	True	NA	17	True	AATAAA	-19	NA	54102868	54106965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54102899_54103113_54103189_54105933_54106012_54106810
transcript_111124.known	chr19	+	435	5	FSM	ENSG00000170906.16	ENST00000391762.5	435	5	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_3	1359.99308362212	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCGAACGTGAGCATGTG	54086657	True	NA	13	True	AATAAA	-15	NA	54102851	54106961	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54102889_54103113_54103189_54105933_54106012_54106352_54106447_54106810
transcript_111125.known	chr19	+	445	5	FSM	ENSG00000170906.16	ENST00000451517.5	445	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	1382.72213405297	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCGAACGTGAGCATGTG	54086660	True	NA	13	True	AATAAA	-15	NA	54102854	54106961	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54102889_54103113_54103189_54105596_54105704_54105933_54106012_54106810
transcript_111126.known	chr19	+	1833	14	FSM	ENSG00000105618.14	ENST00000321030.9	1833	14	0	0	0	0	multi-exon	FALSE	canonical	3	497	junction_1	90.5830554840606	1204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCCTTGGGGAGTGATC	54102554	True	NA	15	True	ATTAAA	-16	NA	54115753	54131713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54115798_54118270_54118456_54118572_54118634_54121859_54121944_54122496_54122595_54123453_54123561_54123748_54123919_54124498_54124657_54126527_54126618_54128072_54128201_54128304_54128378_54129056_54129186_54129271_54129371_54131306
transcript_111147.known	chr19	+	2818	18	FSM	ENSG00000088038.19	ENST00000221232.11	2818	18	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_1	48.2872747176104	1026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGGCAGCAGCGGCCTC	NA	False	NA	32	True	AATAAA	-14	NA	54137761	54155681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54137994_54142928_54143004_54143118_54143187_54143441_54143517_54143659_54143750_54144005_54144135_54144236_54144333_54145597_54145818_54145909_54146044_54146600_54146658_54148147_54148536_54148619_54148744_54149559_54149759_54152225_54152326_54152427_54152627_54152866_54153000_54153714_54153841_54155308
transcript_11115.known	chr1	-	3847	5	FSM	ENSG00000117500.13	ENST00000370290.7	3847	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	120.924563261564	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAATTAACTGCCAGT	-93180498	False	NA	-17	True	AATAAA	-8	NA	93180516	93151857	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_93154889_93156299_93156484_93158814_93158886_93160128_93160227_93180053
transcript_111159.known	chr19	+	4349	17	FSM	ENSG00000088038.19	ENST00000617930.2	4349	17	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_16	119.575143084798	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGGCAGCAGCGGCCTC	NA	False	NA	32	True	AATAAA	-14	NA	54137781	54155681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54137994_54142928_54143004_54143118_54143187_54143441_54143517_54143659_54143750_54144005_54144135_54144236_54144333_54145597_54145818_54145909_54146044_54146600_54146658_54148147_54148536_54148619_54148744_54149559_54149759_54152225_54152326_54152427_54152627_54152866_54153083_54153714
transcript_11116.known	chr1	-	2599	5	FSM	ENSG00000223745.8	ENST00000655606.1	2599	5	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	7.15891053163818	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGAGGCAGGAGAATGG	-93344967	True	NA	NA	False	NA	NA	NA	93345846	93337062	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_93339275_93339356_93339537_93339648_93339680_93340457_93340511_93345723
transcript_111186.known	chr19	-	2413	15	FSM	ENSG00000167608.12	ENST00000617472.4	2413	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	7.70137809030279	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCCTGACTCTCGGGTGA	NA	False	NA	-67	True	NA	NA	NA	54173250	54160164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_54160375_54160466_54160546_54160877_54161034_54161129_54161261_54162101_54162286_54162672_54162771_54163032_54163160_54163723_54163888_54164433_54164602_54165418_54165567_54168170_54168293_54168447_54168681_54169511_54169661_54171869_54172102_54173038
transcript_111189.nnic	chr19	-	2125	13	NIC	ENSG00000167608.12	novel	2362	15	NA	NA	-33	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_9	7.42882897905181	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCGCTTTGAAATCTGCGT	NA	False	NA	-10	True	AATAAA	-19	NA	54173193	54160107	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_54160375_54160466_54160546_54160877_54161034_54161129_54161261_54162101_54162286_54162672_54162771_54163032_54163160_54163723_54163888_54164433_54164602_54168447_54168681_54169511_54169661_54171869_54172084_54173038
transcript_11119.known	chr1	-	5789	4	FSM	ENSG00000117500.13	ENST00000370282.8	5789	4	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	15.121728296285	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTCTCTCTCAAAATAT	-93176153	True	NA	NA	False	AATAAA	-16	NA	93180413	93149741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_93154889_93156299_93156484_93160128_93160227_93180053
transcript_11121.known	chr1	-	1613	4	FSM	ENSG00000223745.8	ENST00000457387.2	1613	4	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_3	6.0184900284226	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGATAGTTCTTATTTT	-93344967	True	NA	NA	False	AAAAAG	-14	NA	93345846	93338130	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_93339537_93339648_93339680_93340457_93340511_93345723
transcript_111211.known	chr19	-	2294	8	FSM	ENSG00000125505.17	ENST00000245615.6	2294	8	0	0	0	0	multi-exon	FALSE	canonical	3	501	junction_2	87.2474781812036	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCGTGTCCGTGCAGGTA	NA	False	NA	-8	True	AATAAA	-14	NA	54189580	54173414	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_54174432_54178764_54178942_54180772_54181134_54183520_54183681_54187160_54187288_54188216_54188347_54188432_54188512_54189337
transcript_111217.known	chr19	-	2471	7	FSM	ENSG00000125505.17	ENST00000431666.6	2471	7	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_4	255.121975184856	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGTGTCCGTGCAGGTATC	NA	False	NA	-6	True	AATAAA	-16	NA	54189882	54173412	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_54174432_54178764_54178942_54180772_54181134_54183520_54183681_54188216_54188347_54188432_54188512_54189337
transcript_11122.known	chr1	+	10124	3	FSM	ENSG00000117505.13	ENST00000370272.9	10124	3	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_1	16	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCTTTACATATGTCTTT	93336579	True	NA	NA	False	TATAAA	-15	NA	93345906	93369493	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_93346866_93353907_93354072_93360492
transcript_111220.known	chr19	-	1797	7	FSM	ENSG00000125505.17	ENST00000391754.5	1797	7	0	0	0	0	multi-exon	FALSE	canonical	3	501	junction_1	87.7618304782261	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGCCTGACAGGTAAG	NA	False	NA	-37	True	GATAAA	-18	NA	54189672	54178336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_54178942_54180772_54181134_54183520_54183681_54187160_54187288_54188216_54188347_54188432_54188512_54189337
transcript_111226.known	chr19	-	2076	6	FSM	ENSG00000125505.17	ENST00000338624.10	2076	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	298.238428107446	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCGTGTCCGTGCAGGTA	NA	False	NA	-8	True	AATAAA	-14	NA	54189568	54173414	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_54174432_54178764_54178942_54180772_54181134_54183520_54183681_54188216_54188347_54189337
transcript_111227.known	chr19	-	557	6	FSM	ENSG00000125505.17	ENST00000453320.1	557	6	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_5	279.580829099565	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTACCTGGACTGGCTG	-54188573	True	NA	NA	False	NA	NA	NA	54189344	54181115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_54181134_54183520_54183681_54187160_54187288_54188216_54188347_54188432_54188512_54189301
transcript_111230.nic	chr19	-	3650	6	NIC	ENSG00000125505.17	novel	1797	7	NA	NA	-13	9	intron_retention	FALSE	canonical	3	633	junction_2	42.6895771822584	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAGGTAAGTGCGTGCTG	NA	False	NA	-28	True	GATAAA	-27	NA	54189685	54178327	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_54181134_54183520_54183681_54187160_54187288_54188216_54188347_54188432_54188512_54189337
transcript_111241.known	chr19	+	2332	5	FSM	ENSG00000170892.13	ENST00000455798.6	2332	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	169.222302017199	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGTTTTATTTTGTCA	NA	False	NA	NA	False	NA	NA	NA	54189937	54194532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54190163_54191360_54191608_54191720_54191965_54192115_54192374_54193174
transcript_111242.known	chr19	+	2211	5	FSM	ENSG00000170892.13	ENST00000429671.7	2211	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	158.95655853094	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGTTTTATTTTGTCA	54189915	True	NA	NA	False	NA	NA	NA	54190267	54194532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54190372_54191360_54191608_54191720_54191965_54192115_54192374_54193174
transcript_111243.known	chr19	+	2294	5	FSM	ENSG00000170892.13	ENST00000302937.8	2294	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	138.90734321842	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTTATTTTGTCACGTT	54189915	True	NA	NA	False	NA	NA	NA	54190267	54194536	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54190451_54191360_54191608_54191720_54191965_54192115_54192374_54193174
transcript_111245.known	chr19	+	1548	5	FSM	ENSG00000170892.13	ENST00000396383.5	1548	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	172.219336893393	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTTGAATGTTTGCGA	54190378	False	NA	12	True	AATAAA	-18	NA	54190730	54193666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54191038_54191360_54191608_54191720_54191965_54192115_54192374_54193174
transcript_111246.known	chr19	+	2160	4	FSM	ENSG00000170892.13	ENST00000396388.3	2160	4	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_1	29.4656108408128	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGTTTTATTTTGTCA	54190955	False	NA	NA	False	NA	NA	NA	54191307	54194532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54191608_54191720_54191965_54192115_54192374_54193174
transcript_11125.known	chr1	-	750	3	FSM	ENSG00000117500.13	ENST00000370280.1	750	3	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_2	3.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTAAGTTTGTTTTATA	-93180243	False	NA	NA	False	TATAAA	-32	NA	93180261	93156039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_93156484_93160128_93160227_93180053
transcript_111250.known	chr19	+	2372	3	FSM	ENSG00000170892.13	ENST00000496583.1	2372	3	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_1	31	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTTGAATGTTTGCGA	54189990	True	NA	12	True	AATAAA	-18	NA	54190342	54193666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54191965_54192115_54192374_54193174
transcript_111251.known	chr19	+	752	6	FSM	ENSG00000170889.14	ENST00000436445.5	752	6	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_4	3819.31676612454	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGAAGGGCCAGGGTGGG	54102668	True	NA	-82	True	NA	NA	NA	54200870	54207522	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54200894_54201159_54201282_54201486_54201610_54206275_54206463_54206552_54206725_54207397
transcript_111254.known	chr19	+	476	5	FSM	ENSG00000170889.14	ENST00000626547.2	476	5	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_4	3305.17291529505	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTGTGAACTCACCCAGA	54102655	True	NA	NA	False	NA	NA	NA	54200857	54206565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54200889_54201159_54201282_54201486_54201610_54206275_54206463_54206552
transcript_111256.known	chr19	+	713	5	FSM	ENSG00000170889.14	ENST00000302907.9	713	5	0	0	0	0	multi-exon	FALSE	canonical	3	4876	junction_1	1672.59917493702	5611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGTGGGGGTCTCTC	54102655	True	NA	26	True	AATAAA	-20	NA	54200857	54207647	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54200889_54201159_54201282_54201486_54201610_54206275_54206463_54207397
transcript_111257.known	chr19	+	956	5	FSM	ENSG00000170889.14	ENST00000495002.5	956	5	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_4	3826.90952336216	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATTGGTGTGTGGGGGTCT	54102676	True	NA	23	True	AATAAA	-17	NA	54200878	54207644	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54200894_54201159_54201282_54201486_54201610_54206275_54206725_54207397
transcript_111262.known	chr19	+	772	5	FSM	ENSG00000170889.14	ENST00000391752.5	772	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	3716.94978275198	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGTGGGGGTCTCTC	54102669	True	NA	26	True	AATAAA	-20	NA	54200871	54207647	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54200962_54201159_54201282_54201486_54201610_54206275_54206463_54207397
transcript_111263.known	chr19	+	897	4	FSM	ENSG00000170889.14	ENST00000484121.5	897	4	0	0	0	0	multi-exon	FALSE	canonical	3	4876	junction_1	1560.95811033552	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTACTCAGTGTGCCCT	NA	False	NA	NA	False	NA	NA	NA	54200808	54206847	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54200889_54201159_54201282_54201486_54201610_54206275
transcript_111264.known	chr19	+	510	4	FSM	ENSG00000170889.14	ENST00000391751.7	510	4	0	0	0	0	multi-exon	FALSE	canonical	3	437	junction_3	3008.97402226517	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGTGGGGGTCTCTC	54102671	True	NA	26	True	AATAAA	-20	NA	54200873	54207647	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54200889_54201159_54201282_54201486_54201610_54207397
transcript_111270.known	chr19	+	709	4	FSM	ENSG00000170889.14	ENST00000391753.6	709	4	0	0	0	0	multi-exon	FALSE	canonical	3	7752	junction_1	638.75156011986	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGTGGGGGTCTCTC	54200893	False	NA	26	True	AATAAA	-20	NA	54201132	54207647	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54201282_54201486_54201610_54206275_54206463_54207397
transcript_111271.known	chr19	+	1600	3	FSM	ENSG00000170889.14	ENST00000441429.1	1600	3	0	0	0	0	multi-exon	FALSE	canonical	3	7752	junction_1	372	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATCAGCGCTTTACAATTG	54199010	True	NA	9	True	AATAAA	-3	NA	54201159	54207630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54201282_54201486_54201610_54206275
transcript_111277.known	chr19	+	2056	14	FSM	ENSG00000167614.14	ENST00000376530.8	2056	14	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_12	20.0159699553741	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTTTCTTCTGATTCTAAA	NA	False	NA	NA	False	TTTAAA	-30	NA	54415463	54436904	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54415679_54419127_54419307_54421276_54421389_54422189_54422411_54426672_54426769_54429306_54429380_54429881_54429958_54430549_54430606_54430812_54430906_54431098_54431192_54435541_54435685_54435827_54435874_54436090_54436172_54436332
transcript_111282.known	chr19	+	1763	13	FSM	ENSG00000167614.14	ENST00000376531.3	1763	13	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_11	21.8193339342275	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGTCCTCCTTATTTCT	NA	False	NA	19	True	AATAAA	-23	NA	54415525	54436719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54415679_54419127_54419307_54421276_54421389_54422189_54422411_54426672_54426769_54429306_54429380_54429881_54429958_54430549_54430606_54430812_54430906_54431098_54431192_54435541_54435685_54436090_54436172_54436332
transcript_11129.known	chr1	+	3889	15	FSM	ENSG00000137942.18	ENST00000370253.6	3889	15	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_14	70.0027696245087	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTTAGTGTGTGATCTT	93434910	False	NA	27	True	AATAAA	-24	NA	93448281	93554661	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_93448306_93499467_93499584_93522081_93522136_93523343_93523492_93524260_93524324_93529651_93529757_93530754_93530884_93532921_93533069_93534704_93534909_93544106_93544217_93546841_93546975_93547346_93547442_93549277_93549427_93550946_93551106_93552408
transcript_111292.nnic	chr19	+	2332	11	NNC	ENSG00000167614.14	novel	1763	13	NA	NA	-30	-301	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_10	30.7943176576459	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCCGGGCGTGGTGGCAC	NA	False	NA	NA	False	AATACA	-7	NA	54415400	54433410	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_54415679_54419127_54419307_54421276_54421389_54422189_54422411_54426672_54426769_54429306_54429380_54429881_54429958_54430549_54430606_54430812_54430906_54431098_54431192_54432355
transcript_111293.nnic	chr19	+	2498	11	NNC	ENSG00000167614.14	novel	1763	13	NA	NA	-30	-135	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_10	30.7943176576459	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGGGGGCTAGGGATGG	NA	False	NA	NA	False	NA	NA	NA	54415400	54433576	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_54415679_54419127_54419307_54421276_54421389_54422189_54422411_54426672_54426769_54429306_54429380_54429881_54429958_54430549_54430606_54430812_54430906_54431098_54431192_54432355
transcript_111294.nnic	chr19	+	2595	11	NNC	ENSG00000167614.14	novel	1763	13	NA	NA	-12	13	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_10	30.7943176576459	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAACAATAAGGGACATCAG	NA	False	NA	NA	False	ATTAAA	-11	NA	54415451	54433724	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_54415679_54419127_54419307_54421276_54421389_54422189_54422411_54426672_54426769_54429306_54429380_54429881_54429958_54430549_54430606_54430812_54430906_54431098_54431192_54432355
transcript_111295.nnic	chr19	+	3588	11	NNC	ENSG00000167614.14	novel	1763	13	NA	NA	-30	955	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_10	30.7943176576459	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGCCGTTTCTGCTGATT	NA	False	NA	12	True	AATACA	-29	NA	54415400	54434666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_54415679_54419127_54419307_54421276_54421389_54422189_54422411_54426672_54426769_54429306_54429380_54429881_54429958_54430549_54430606_54430812_54430906_54431098_54431192_54432355
transcript_111308.nic	chr19	+	3685	16	NIC	ENSG00000167615.17	novel	3658	16	NA	NA	-22	0	intron_retention	FALSE	canonical	3	80	junction_15	69.9792350153482	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCACGCTCCTGCTTTGT	NA	False	NA	16	True	ATTAAA	-16	NA	54449167	54462016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_54449307_54451289_54451383_54452092_54452268_54452650_54452753_54453545_54453657_54454429_54454683_54454950_54455093_54455363_54455568_54455966_54456246_54456324_54456466_54456635_54456922_54457746_54457849_54457933_54458003_54458102_54458233_54458313_54458522_54460765
transcript_111310.known	chr19	+	3658	16	FSM	ENSG00000167615.17	ENST00000326764.10	3658	16	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_15	77.1148061874847	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCACGCTCCTGCTTTGT	NA	False	NA	16	True	ATTAAA	-16	NA	54449198	54462016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54449311_54451289_54451383_54452092_54452268_54452650_54452753_54453545_54453657_54454429_54454683_54454950_54455093_54455363_54455568_54455966_54456246_54456324_54456466_54456635_54456922_54457746_54457849_54457933_54458003_54458102_54458233_54458313_54458522_54460765
transcript_111312.nic	chr19	+	5928	15	NIC	ENSG00000167615.17	novel	5789	14	NA	NA	-22	0	intron_retention	FALSE	canonical	3	164	junction_1	50.6454260883791	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGCACGCTCCTGCTTTG	NA	False	NA	15	True	ATTAAA	-15	NA	54449167	54462015	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_54449307_54451289_54451383_54452092_54452268_54452650_54452753_54453545_54453657_54454429_54454683_54454950_54455093_54455363_54455568_54455966_54456246_54456324_54456466_54456635_54456922_54457746_54457849_54457933_54458003_54458102_54458233_54458313
transcript_111313.nic	chr19	+	3574	15	NIC	ENSG00000167615.17	novel	3658	16	NA	NA	-22	0	intron_retention	FALSE	canonical	3	38	junction_4	93.4708565297664	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCACGCTCCTGCTTTGT	NA	False	NA	16	True	ATTAAA	-16	NA	54449167	54462016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_54449307_54451289_54451383_54452092_54452268_54452650_54452753_54454429_54454683_54454950_54455093_54455363_54455568_54455966_54456246_54456324_54456466_54456635_54456922_54457746_54457849_54457933_54458003_54458102_54458233_54458313_54458522_54460765
transcript_111314.nic	chr19	+	5919	15	ISM	ENSG00000167615.17	ENST00000326764.10	3658	16	-18	1	-9	0	intron_retention	FALSE	canonical	3	104	junction_1	61.6678065715568	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGCACGCTCCTGCTTTG	NA	False	NA	15	True	ATTAAA	-15	NA	54449180	54462015	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_54449311_54451289_54451383_54452092_54452268_54452650_54452753_54453545_54453657_54454429_54454683_54454950_54455093_54455363_54455568_54455966_54456246_54456324_54456466_54456635_54456922_54457746_54457849_54457933_54458003_54458102_54458233_54458313
transcript_111319.known	chr19	-	2047	1	FSM	ENSG00000275183.2	ENST00000611161.2	2047	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACGTGAGCTGGTGATC	-54463746	False	NA	-4	True	AATAAA	-28	NA	54463778	54461731	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_54461700_54463800
transcript_11132.known	chr1	+	5341	14	FSM	ENSG00000137942.18	ENST00000260506.12	5341	14	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_8	36.3998179330904	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTTTAGTGTGTGATC	93434759	True	NA	25	True	AATAAA	-22	NA	93448130	93554659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_93448306_93499467_93499584_93522081_93522136_93523343_93523492_93524260_93524324_93529651_93529757_93530754_93530884_93532921_93533069_93534704_93534909_93544106_93544217_93546841_93546975_93547346_93547442_93549277_93549427_93550946
transcript_111322.known	chr19	+	3576	13	FSM	ENSG00000022556.16	ENST00000543010.5	3576	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	4.88407275403087	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTTACTTAATAATGGGC	NA	False	NA	NA	False	AATAAA	-23	NA	54965251	55001142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54965378_54969998_54970296_54974499_54974545_54977751_54977824_54981616_54981683_54982161_54983729_54985046_54985218_54986150_54986316_54990021_54990193_54990501_54990673_54994268_54994440_54997316_54997488_55000759
transcript_111324.known	chr19	+	3540	13	FSM	ENSG00000022556.16	ENST00000448584.7	3540	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	4.60072458061409	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGCTGTTACTTAATAAT	54966340	True	NA	NA	False	AATAAA	-19	NA	54966373	55001138	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_54966468_54969998_54970296_54974499_54974545_54977751_54977824_54981616_54981683_54982161_54983729_54985046_54985218_54986150_54986316_54990021_54990193_54990501_54990673_54994268_54994440_54997316_54997488_55000759
transcript_111325.known	chr19	-	3269	11	FSM	ENSG00000167634.12	ENST00000592784.5	3269	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	7.82879301041993	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACACTAGAGTCTGTCGA	-54947253	True	NA	NA	False	NA	NA	NA	54947497	54923652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_54923873_54927604_54927776_54930498_54930667_54933568_54933740_54934488_54934660_54936260_54936432_54938043_54938242_54938887_54940467_54940930_54941006_54941434_54941751_54947468
transcript_111326.known	chr19	-	3250	10	FSM	ENSG00000167634.12	ENST00000340844.6	3250	10	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	8.99931410280737	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCGTTTATTGACATGCT	-54947261	True	NA	0	True	AATAAA	-21	NA	54947505	54923508	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_54923873_54930498_54930667_54933568_54933740_54934488_54934660_54936260_54936432_54938043_54938242_54938887_54940467_54940930_54941006_54941434_54941751_54947468
transcript_111342.nic	chr19	-	1751	6	NIC	ENSG00000160439.16	novel	1870	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_5	27.3320324893704	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGAGTCGTAGATTTTATT	NA	False	NA	31	True	AAAAAG	-12	NA	55063148	55044315	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_55045310_55047386_55047489_55048328_55048542_55048658_55048764_55056652_55056809_55062967
transcript_111349.known	chr19	-	1931	7	FSM	ENSG00000160439.16	ENST00000610356.4	1931	7	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	7.1043804953157	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTACCCGAGTCGTAG	NA	False	NA	23	True	AAAAAG	-4	NA	55063217	55044323	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55045310_55047386_55047489_55048328_55048542_55048658_55048764_55056652_55056809_55059156_55059276_55062967
transcript_111350.known	chr19	-	1987	8	FSM	ENSG00000160439.16	ENST00000396247.7	1987	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	33.6452076825214	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAAAAAGAAGA	NA	False	NA	4	True	NA	NA	NA	55069529	55044342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55045310_55047386_55047489_55048328_55048542_55048658_55048764_55056652_55056809_55059156_55059276_55064295_55064413_55069321
transcript_111353.known	chr19	+	2569	20	FSM	ENSG00000131037.15	ENST00000201647.11	2569	20	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_6	46.3391089619835	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTGTGCCAACTGCTGT	NA	False	NA	19	True	TATAAA	-19	NA	55075868	55087923	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55075920_55076407_55076462_55078087_55078129_55078998_55079058_55079689_55079852_55080128_55080279_55080771_55080855_55081230_55081493_55081772_55081900_55082091_55082181_55082274_55082350_55082453_55082603_55083377_55083520_55083615_55083645_55085840_55085974_55086060_55086193_55086391_55086519_55086713_55086889_55087302_55087436_55087527
transcript_111358.nic	chr19	+	2671	19	NIC	ENSG00000131037.15	novel	2569	20	NA	NA	7	0	intron_retention	FALSE	canonical	3	45	junction_6	47.5209180711083	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATGGTGTGCCAACTGC	NA	False	NA	16	True	TATAAA	-16	NA	55075859	55087920	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_55075920_55076407_55076462_55078087_55078129_55078998_55079058_55079689_55079852_55080128_55080279_55080771_55080855_55081230_55081493_55081772_55081900_55082091_55082181_55082274_55082350_55082453_55082603_55083377_55083645_55085840_55085974_55086060_55086193_55086391_55086519_55086713_55086889_55087302_55087436_55087527
transcript_111370.known	chr19	+	2360	18	FSM	ENSG00000131037.15	ENST00000540810.5	2360	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	50.5981522427511	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCGAGAGGGTGCAGTGG	55075891	True	NA	-56	True	NA	NA	NA	55075902	55087848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55075920_55076407_55076462_55079689_55079852_55080128_55080279_55080771_55080855_55081230_55081493_55081772_55081900_55082091_55082181_55082274_55082350_55082453_55082603_55083377_55083520_55083615_55083645_55085840_55085974_55086060_55086193_55086391_55086519_55086713_55086889_55087302_55087436_55087527
transcript_111373.known	chr19	+	1708	15	FSM	ENSG00000131037.15	ENST00000592824.5	1708	15	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_14	41.4603941818488	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAAGCACCATGCCTGGGC	NA	False	NA	NA	False	NA	NA	NA	55075852	55083985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55075920_55076407_55076462_55078087_55078129_55078998_55079058_55079689_55079852_55080128_55080279_55080771_55080855_55081230_55081493_55081772_55081900_55082091_55082181_55082274_55082350_55082453_55082603_55083377_55083520_55083615_55083645_55083766
transcript_111383.known	chr19	+	2198	15	FSM	ENSG00000131037.15	ENST00000245618.5	2198	15	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	40.3939781327335	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGATGGTGTGCCAACTG	55080380	False	NA	15	True	TATAAA	-15	NA	55080391	55087919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55080542_55080771_55080855_55081230_55081493_55081772_55081900_55082091_55082181_55082274_55082350_55082453_55082603_55083377_55083520_55083615_55083645_55085840_55085974_55086060_55086193_55086391_55086519_55086713_55086889_55087302_55087436_55087527
transcript_111391.nic	chr19	+	2340	14	NIC	ENSG00000131037.15	novel	2198	15	NA	NA	-45	0	intron_retention	FALSE	canonical	3	32	junction_1	40.9937215570945	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATGGTGTGCCAACTGC	55080335	False	NA	16	True	TATAAA	-16	NA	55080346	55087920	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_55080542_55080771_55080855_55081230_55081493_55081772_55081900_55082091_55082181_55082274_55082350_55082453_55082603_55083377_55083645_55085840_55085974_55086060_55086193_55086391_55086519_55086713_55086889_55087302_55087436_55087527
transcript_111405.known	chr19	+	1976	10	FSM	ENSG00000131037.15	ENST00000592102.5	1976	10	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_2	27.0600612264689	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTGTGCCAACTGCTG	55081669	False	NA	18	True	TATAAA	-18	NA	55081692	55087922	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55081900_55082091_55082350_55082453_55082603_55083377_55083645_55085840_55085974_55086060_55086193_55086391_55086519_55086713_55086889_55087302_55087436_55087527
transcript_111412.known	chr19	-	967	14	FSM	ENSG00000105048.18	ENST00000291901.12	967	14	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_13	360.172509620585	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTCTCTCCTGGTTAA	-55147634	False	2141	-2	True	NA	NA	NA	55149206	55132793	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55141921_55145543_55145566_55146433_55146467_55146680_55146708_55147007_55147022_55147125_55147169_55149160
transcript_111414.known	chr19	-	934	13	FSM	ENSG00000105048.18	ENST00000356783.9	934	13	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_12	364.501143116635	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTCTCTCCTGGTTAA	-55147634	False	2141	-2	True	NA	NA	NA	55149206	55132793	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55141921_55145543_55145566_55146680_55146708_55147007_55147022_55147125_55147169_55149160
transcript_11142.nic	chr1	+	1353	10	ISM	ENSG00000137942.18	ENST00000260506.12	5341	14	-102	10443	-89	-5098	5prime_fragment	FALSE	canonical	3	472	junction_8	39.3976247952357	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTATTCCTTTAAGTTTT	NA	False	NA	32	True	NA	NA	NA	93448028	93544216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_93448306_93499467_93499584_93522081_93522136_93523343_93523492_93524260_93524324_93529651_93529757_93530754_93530884_93532921_93533069_93534704_93534909_93544106
transcript_111424.nnic	chr19	-	1109	11	NIC	ENSG00000105048.18	novel	1065	11	NA	NA	-20	3	combination_of_known_splicesites	TRUE	canonical	3	63	junction_10	291.093868021984	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGCTGGGTTCTCTGATG	-55143787	True	NA	-40	True	AATAAA	-15	NA	55146969	55132831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55141921_55145543_55145566_55146433_55146467_55146659
transcript_111425.known	chr19	-	1065	11	FSM	ENSG00000105048.18	ENST00000587465.6	1065	11	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_10	270.201942998195	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACCCGCTGGGTTCTCTG	-55143767	True	NA	-43	True	AATAAA	-12	NA	55146949	55132834	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55141921_55145543_55145566_55146433_55146467_55146680
transcript_111426.nic	chr19	-	1245	11	NIC	ENSG00000105048.18	novel	1065	11	NA	NA	-40	3	combination_of_known_junctions	FALSE	canonical	3	129	junction_8	316.974778176435	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGCTGGGTTCTCTGATG	-55145417	False	NA	-40	True	AATAAA	-15	NA	55146989	55132831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55142058_55145543_55145566_55146433_55146467_55146680
transcript_111429.nic	chr19	-	1096	10	NIC	ENSG00000105048.18	novel	995	10	NA	NA	-40	3	combination_of_known_junctions	FALSE	canonical	3	330	junction_9	200.408163752791	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGCTGGGTTCTCTGATG	-55145417	False	NA	-40	True	AATAAA	-15	NA	55146989	55132831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55141921_55145543_55145566_55146659
transcript_111430.known	chr19	-	995	10	FSM	ENSG00000105048.18	ENST00000585321.6	995	10	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_9	239.366808759699	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCGGTAGCTTGAAATAAAC	-55143760	True	NA	-73	True	NA	NA	NA	55146942	55132864	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55141921_55145543_55145566_55146680
transcript_111432.nic	chr19	-	1205	10	NIC	ENSG00000105048.18	novel	995	10	NA	NA	-33	3	combination_of_known_junctions	FALSE	canonical	3	129	junction_8	303.409066654896	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGCTGGGTTCTCTGATG	-55145410	False	NA	-40	True	AATAAA	-15	NA	55146982	55132831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55142058_55145543_55145566_55146680
transcript_11145.nic	chr1	+	593	4	ISM	ENSG00000137942.18	ENST00000271234.13	4227	17	-89	31172	-89	-25825	5prime_fragment	FALSE	canonical	3	529	junction_2	17.96292478041	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAATTCTTACAATTTTC	NA	False	NA	NA	False	AAGAAA	-3	NA	93448028	93523489	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_93448306_93499467_93499584_93522081_93522136_93523343
transcript_111452.known	chr19	-	2169	12	FSM	ENSG00000167646.14	ENST00000391720.8	2169	12	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_6	11.1362708715988	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTGTCCAAGCGTCTT	-55166608	False	NA	-2	True	AGTAAA	-19	NA	55166651	55158662	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55159450_55159532_55159608_55159898_55160014_55160639_55160776_55161064_55161188_55161292_55161419_55161642_55161826_55162132_55162291_55165369_55165464_55165857_55166001_55166328_55166418_55166511
transcript_111453.known	chr19	-	2118	12	FSM	ENSG00000167646.14	ENST00000524407.7	2118	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_11	11.7318525236368	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGTGTCCAAGCGTC	-55166351	True	NA	-4	True	AGTAAA	-17	NA	55166613	55158664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55159450_55159532_55159608_55159898_55160014_55160639_55160776_55161064_55161188_55161292_55161419_55161642_55161826_55162132_55162291_55165369_55165464_55165857_55166001_55166328_55166418_55166522
transcript_111459.known	chr19	-	669	5	FSM	ENSG00000129991.13	ENST00000588882.1	669	5	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_4	115.275756341045	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGTGACTCCATGTCTAT	-55156463	False	NA	-7	True	AATAAA	-16	NA	55156725	55151770	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55151918_55154029_55154207_55154740_55154831_55156200_55156333_55156602
transcript_111462.known	chr19	-	699	4	FSM	ENSG00000129991.13	ENST00000585806.5	699	4	0	0	0	0	multi-exon	FALSE	canonical	3	480	junction_1	38.7843038125248	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTCCATGTCTATTACC	-55154340	True	NA	-3	True	AATAAA	-20	NA	55156481	55151766	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55151918_55154029_55154207_55154740_55154831_55156200
transcript_111466.known	chr19	-	329	3	FSM	ENSG00000129990.15	ENST00000587067.1	329	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	3	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACGAGGCCATCGGGAG	-55174988	False	NA	NA	False	NA	NA	NA	55175031	55173639	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55173685_55174516_55174651_55174881
transcript_111468.known	chr19	-	3984	24	FSM	ENSG00000105063.19	ENST00000412770.7	3984	24	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_23	66.8949462771973	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCTGGTCAGACCTTAC	-55248043	True	NA	-18	True	AATAAA	-17	NA	55259017	55229778	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55230532_55230612_55230685_55230773_55230885_55231409_55231492_55231597_55231669_55231801_55231983_55232074_55232212_55236642_55236822_55236912_55236971_55239404_55239503_55239593_55239684_55239825_55239912_55239998_55240115_55240235_55240301_55240944_55241080_55241238_55241392_55241476_55241640_55242165_55242280_55242375_55242489_55245119_55245186_55245264_55245403_55245491_55245679_55246876_55247110_55258434
transcript_111469.known	chr19	-	1508	2	FSM	ENSG00000180089.6	ENST00000589190.1	1508	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAAGAGGACTGTTTGGT	-55228732	False	NA	-4	True	GATAAA	-21	NA	55228773	55226638	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55227564_55228190
transcript_111474.known	chr19	-	1768	9	FSM	ENSG00000133265.11	ENST00000255631.9	1768	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_8	224.508038553189	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATCTATAGAGCCATTGT	-55280348	False	NA	-11	True	AATAAA	-14	NA	55280360	55262230	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55262683_55265277_55265390_55265885_55265983_55266130_55266287_55274397_55274623_55277641_55277847_55279398_55279703_55280034_55280109_55280217
transcript_111483.known	chr19	-	1635	8	FSM	ENSG00000133265.11	ENST00000433386.7	1635	8	0	0	0	0	multi-exon	TRUE	canonical	3	512	junction_7	79.0207929236711	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCCATTGTGTCATTTA	-55275505	True	NA	-3	True	AATAAA	-22	NA	55280110	55262222	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55262683_55265277_55265390_55265885_55265983_55266130_55266287_55274397_55274623_55277641_55277847_55279398_55279703_55280034
transcript_111486.nnic	chr19	-	1788	8	NNC	ENSG00000133265.11	novel	1768	9	NA	NA	-20	-108	intron_retention	FALSE	canonical	3	99	junction_2	213.509451112324	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCGCCTTTGTCATCTCC	NA	False	NA	-4	True	AATAAA	-31	NA	55280401	55262338	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_55262683_55265277_55265368_55265885_55265983_55266130_55266287_55274397_55274623_55277641_55277847_55279398_55279703_55280034
transcript_11149.known	chr1	-	3217	14	FSM	ENSG00000137936.18	ENST00000370244.5	3217	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	19.9282737504922	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGTATCCAGTCTCTTT	-93847137	False	NA	3	True	AATACA	-14	NA	93847150	93561790	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_93562420_93567278_93567492_93567739_93567852_93571669_93571842_93576013_93576130_93582300_93582954_93584017_93584122_93588976_93589420_93592264_93592394_93642303_93642344_93674613_93674942_93706091_93706143_93845566_93845713_93847069
transcript_111490.nic	chr19	-	1629	8	NIC	ENSG00000133265.11	novel	1635	8	NA	NA	-5	-108	combination_of_known_junctions	FALSE	canonical	3	49	junction_7	229.349034425342	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCGCCTTTGTCATCTCC	-55275510	True	NA	-4	True	AATAAA	-31	NA	55280115	55262338	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_55262683_55265277_55265390_55265885_55265983_55266130_55266287_55274397_55274623_55277641_55277847_55279398_55279703_55279929
transcript_111499.known	chr19	-	1449	7	FSM	ENSG00000133265.11	ENST00000587922.5	1449	7	0	0	0	0	multi-exon	FALSE	canonical	3	612	junction_5	52.8446360149784	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGTCTCTGTGCAGTCCC	-55279844	False	4605	NA	False	NA	NA	NA	55279856	55262486	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55262683_55265277_55265390_55265885_55265983_55266130_55266287_55274397_55274623_55277641_55277847_55279398
transcript_111500.known	chr19	+	3277	19	FSM	ENSG00000160469.17	ENST00000309383.6	3277	19	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_3	11.3731598701548	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATAATAATAATAAATAGCC	55283812	True	NA	72	True	NA	NA	NA	55283996	55312562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55284579_55287006_55287102_55287213_55287300_55289479_55289621_55294016_55294134_55294213_55294248_55294328_55294398_55301511_55301659_55302136_55302169_55302696_55302868_55303310_55303409_55303666_55303827_55304049_55304111_55304550_55304921_55305320_55305370_55305462_55305587_55306251_55306451_55308638_55308729_55311910
transcript_111509.known	chr19	+	2286	9	FSM	ENSG00000133247.14	ENST00000255613.8	2286	9	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_3	21.882855732285	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGGCGGTTTTTTGTTT	55335169	True	NA	22	True	ATTAAA	-19	NA	55339875	55348121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55339958_55341793_55342047_55342214_55342381_55342741_55342852_55343679_55343844_55343977_55343998_55346212_55346350_55346499_55346688_55346955
transcript_111511.nic	chr19	+	2567	9	NIC	ENSG00000133247.14	novel	2286	9	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_3	49.7393204617835	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTTGGCGGTTTTTTGTT	55335154	True	NA	21	True	ATTAAA	-18	NA	55339860	55348120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_55339958_55341793_55342047_55342214_55342648_55342741_55342852_55343679_55343844_55343977_55343998_55346212_55346350_55346499_55346688_55346955
transcript_11152.known	chr1	-	3229	12	FSM	ENSG00000137936.18	ENST00000260502.11	3229	12	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_7	6.84177735353701	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTACCTCTTAGCTACCTC	-93680766	True	NA	53	True	ATTAAA	-22	NA	93681837	93561740	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_93562420_93567278_93567492_93567739_93567852_93571669_93571842_93576013_93576130_93582300_93582954_93584017_93584122_93588976_93589420_93592264_93592394_93642303_93642344_93674613_93674942_93681597
transcript_111527.known	chr19	+	2077	8	FSM	ENSG00000133247.14	ENST00000445196.5	2077	8	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	41.0569539711333	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTTGGCGGTTTTTTGTT	55335211	True	NA	21	True	ATTAAA	-18	NA	55339917	55348120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55339958_55341793_55342047_55342741_55342852_55343679_55343844_55343977_55343998_55346212_55346350_55346499_55346688_55346955
transcript_111530.nic	chr19	+	2472	8	NIC	ENSG00000133247.14	novel	2077	8	NA	NA	4	0	intron_retention	FALSE	canonical	3	107	junction_2	20.8767031567218	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTTGGCGGTTTTTTGTT	55335150	True	NA	21	True	ATTAAA	-18	NA	55339856	55348120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_55339958_55341793_55342381_55342741_55342852_55343679_55343844_55343977_55343998_55346212_55346350_55346499_55346688_55346955
transcript_111532.nic	chr19	+	2735	8	NIC	ENSG00000133247.14	novel	2077	8	NA	NA	8	0	intron_retention	FALSE	canonical	3	14	junction_2	52.8498064406704	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTTGGCGGTTTTTTGTT	55335154	True	NA	21	True	ATTAAA	-18	NA	55339860	55348120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_55339958_55341793_55342648_55342741_55342852_55343679_55343844_55343977_55343998_55346212_55346350_55346499_55346688_55346955
transcript_111547.known	chr19	+	713	3	FSM	ENSG00000133247.14	ENST00000498738.1	713	3	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_2	25.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTGCCCTGCACGCGCT	55335169	True	NA	NA	False	NA	NA	NA	55339875	55342785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55339958_55341793_55342381_55342741
transcript_111554.known	chr19	-	3058	8	FSM	ENSG00000267706.3	ENST00000591954.3	3058	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	5.62791874388349	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATGACGCCACCTCTGAG	NA	False	NA	NA	False	NA	NA	NA	55359516	55352300	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55352327_55352532_55352737_55353311_55353394_55353606_55353775_55353865_55354540_55354649_55355096_55355259_55355346_55358144
transcript_111563.known	chr19	+	4209	5	FSM	ENSG00000108107.15	ENST00000344063.7	4209	5	0	0	0	0	multi-exon	FALSE	canonical	3	3897	junction_1	1079.79674013214	1533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTCATTATGAAATATGC	55255216	True	NA	19	True	AATAAA	-17	NA	55385931	55392085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55385966_55386349_55386439_55386569_55386694_55387929_55388049_55388242
transcript_111564.known	chr19	+	616	5	FSM	ENSG00000108107.15	ENST00000558815.5	616	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	2625.08698665397	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCACATGCCTATGACTA	55255216	True	NA	40	True	TATAAA	-34	NA	55385931	55391803	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55385966_55386349_55386439_55386569_55386694_55387929_55388049_55391553
transcript_111573.known	chr19	-	743	5	FSM	ENSG00000108106.14	ENST00000587845.5	743	5	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	5624.49155479853	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTCCTCCACCGACCCT	-55407702	False	NA	NA	False	NA	NA	NA	55407719	55401578	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55401763_55404060_55404148_55404287_55404479_55406814_55406963_55407586
transcript_111575.known	chr19	+	1204	4	FSM	ENSG00000108107.15	ENST00000560583.5	1204	4	0	0	0	0	multi-exon	FALSE	canonical	3	3897	junction_1	1201.64368910071	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTTATAACTGTAAGGGA	55255218	True	NA	NA	False	NA	NA	NA	55385933	55388888	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55385966_55386349_55386439_55386569_55386694_55387929
transcript_111579.known	chr19	-	496	4	FSM	ENSG00000108106.14	ENST00000589978.1	496	4	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_2	4931.207447359	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGCGGGCCGCCTGCTC	-55334516	True	NA	NA	False	NA	NA	NA	55407771	55401713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55401763_55404287_55404402_55406814_55406963_55407586
transcript_11158.nic	chr1	-	2133	7	ISM	ENSG00000137936.18	ENST00000260502.11	3229	12	-41	20405	-41	155	5prime_fragment	FALSE	canonical	3	34	junction_2	4.81894409826699	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGATAACACCAGCATGG	NA	False	NA	NA	False	ATTAAA	-22	NA	93681878	93582145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_93582954_93584017_93584122_93588976_93589420_93592264_93592394_93642303_93642344_93674613_93674942_93681597
transcript_111580.known	chr19	-	2559	4	FSM	ENSG00000108106.14	ENST00000264552.14	2559	4	0	0	0	0	multi-exon	FALSE	canonical	3	10693	junction_3	558.147133130882	5208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTGACAGAGTTCCTCAA	-55334533	True	NA	-6	True	AATAAA	-18	NA	55407788	55399744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55401763_55404287_55404479_55406814_55406963_55407586
transcript_111586.known	chr19	+	444	4	FSM	ENSG00000108107.15	ENST00000558131.1	444	4	0	0	0	0	multi-exon	FALSE	canonical	1	47	junction_2	3008.95434033523	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTCGACTGGGCCTCC	55385500	True	NA	29	True	AATAAA	-18	NA	55386349	55388373	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55386439_55386569_55386675_55387929_55388049_55388242
transcript_111589.known	chr19	-	1075	6	FSM	ENSG00000063241.8	ENST00000425675.7	1075	6	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_3	88.9390802740842	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAAACCATTCTTGGGTT	-55455267	True	NA	-9	True	AATAAA	-17	NA	55461642	55452984	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55453389_55454988_55455107_55455259_55455331_55455635_55455846_55456348_55456490_55461511
transcript_111590.known	chr19	-	1122	6	FSM	ENSG00000063241.8	ENST00000085068.7	1122	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	129.499652509186	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGACCAAACCATTCTTG	-55455270	True	NA	-13	True	AATAAA	-13	NA	55461645	55452988	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55453389_55454988_55455107_55455259_55455379_55455635_55455846_55456348_55456490_55461511
transcript_111591.known	chr19	-	1566	5	FSM	ENSG00000063241.8	ENST00000438389.6	1566	5	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_3	86.1259978171516	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAAACCATTCTTGGGTT	-55462324	False	NA	-9	True	AATAAA	-17	NA	55462343	55452984	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55453389_55454988_55455107_55455259_55455331_55456348_55456490_55461511
transcript_111593.nnic	chr19	-	934	5	NIC	ENSG00000063241.8	novel	1122	6	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	136.376317592168	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGACCAAACCATTCTTG	-55455292	True	NA	-13	True	AATAAA	-13	NA	55461667	55452988	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_55453389_55454988_55455107_55455259_55455379_55456348_55456490_55461511
transcript_111595.known	chr19	-	1337	2	FSM	ENSG00000283567.2	ENST00000635964.2	1337	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTCAAAAAGCAAGATTC	-55464495	True	NA	-13	True	AATAAA	-17	NA	55464751	55463000	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55463968_55464381
transcript_111596.known	chr19	+	472	2	FSM	ENSG00000197483.10	ENST00000591164.1	472	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCAGATCCACCGTAGCG	55474786	True	NA	NA	False	NA	NA	NA	55476645	55481510	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55476808_55481200
transcript_111597.known	chr19	+	1350	3	FSM	ENSG00000090971.5	ENST00000205194.5	1350	3	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	1	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCCTGTCTCTTCTCT	55483349	True	NA	37	True	AATAAA	-13	NA	55485187	55487566	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55485259_55485660_55485781_55486407
transcript_111598.nnic	chr19	+	710	3	NNC	ENSG00000090971.5	novel	1350	3	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	80	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCCTGTCTCTTCTCT	55483343	True	NA	37	True	AATAAA	-13	NA	55485181	55487566	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_55485259_55485660_55485781_55487053
transcript_111599.known	chr19	+	1011	2	FSM	ENSG00000090971.5	ENST00000591590.1	1011	2	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTGGCCTGGGGGGCCCCT	55483356	True	NA	NA	False	GGGGCT	-14	NA	55485194	55486607	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55485259_55485660
transcript_111603.known	chr19	-	2251	4	FSM	ENSG00000187550.9	ENST00000413299.6	2251	4	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_3	0.816496580927726	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTGCTGCTGCGAGTC	-55536760	True	NA	-4	True	AATAAA	-19	NA	55537133	55528610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55530324_55531142_55531346_55536041_55536297_55537053
transcript_111604.nnic	chr19	-	2864	4	NNC	ENSG00000187550.9	novel	2251	4	NA	NA	-135	-5	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_1	5.71547606649408	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATCCCAGTGCTGCTGC	-55537243	False	NA	-9	True	AATAAA	-14	NA	55537268	55528615	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_55530458_55530793_55531346_55536041_55536297_55537053
transcript_111605.nnic	chr19	-	3356	4	NNC	ENSG00000231274.5	novel	1270	4	NA	NA	-4724	1517	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	1.24721912892465	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTGACTTCACATCAGT	NA	False	NA	NA	False	AATAAA	-18	NA	55550267	55539138	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_55541527_55544099_55544303_55544798_55544950_55549653
transcript_111611.nnic	chr19	-	1991	3	NNC	ENSG00000218891.5	novel	2922	2	NA	NA	-93	-756	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	11	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGAGAGCGAGGTGTTC	-55578504	True	NA	-5	True	AATAAA	-16	NA	55580941	55577529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_55577731_55577998_55579642_55580794
transcript_111612.known	chr19	-	2922	2	FSM	ENSG00000218891.5	ENST00000325421.7	2922	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACACTCTTCACTCTTTT	-55578411	True	NA	-3	True	AATAAA	-21	NA	55580848	55576773	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55579642_55580794
transcript_111614.nic	chr19	-	2780	4	NIC	ENSG00000179943.8	novel	2645	3	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	20.5318181259127	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATGCCTCATTTTCTGA	-55598237	True	NA	-5	True	AATAAA	-17	NA	55599537	55591375	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_55593647_55595619_55595735_55597571_55597902_55599473
transcript_111616.known	chr19	-	2645	3	FSM	ENSG00000179943.8	ENST00000221665.5	2645	3	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	14	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATGCCTCATTTTCTGA	-55598217	True	NA	-5	True	AATAAA	-17	NA	55599517	55591375	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55593647_55597571_55597902_55599473
transcript_111617.known	chr19	+	1185	2	FSM	ENSG00000171443.7	ENST00000301073.4	1185	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGTGTGTTCCGTGC	55600168	True	NA	16	True	AATAAA	-16	NA	55600287	55603138	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55600409_55602074
transcript_111618.known	chr19	+	3763	2	FSM	ENSG00000261221.4	ENST00000568956.2	3763	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGAGTCCATCCTTGCAT	55604096	True	NA	23	True	AATAAA	-17	NA	55605646	55617269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55605733_55613592
transcript_11162.known	chr1	+	1766	1	FSM	ENSG00000260464.1	ENST00000565336.1	1766	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTATCCATTTTTCTCT	93847133	False	NA	NA	False	AATATA	-23	NA	93847173	93848939	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_93847200_93848900
transcript_111620.known	chr19	-	1559	2	FSM	ENSG00000179922.6	ENST00000591479.1	1559	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATCCCATCACCTCAAAGC	-55624158	True	NA	NA	False	NA	NA	NA	55624566	55621205	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55622645_55624446
transcript_111621.known	chr19	-	1987	2	FSM	ENSG00000179922.6	ENST00000325351.5	1987	2	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	0	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTGTCGGTCTTGTATT	-55624158	True	NA	-18	True	ATTAAA	-17	NA	55624566	55620740	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_55622645_55624483
transcript_111623.known	chr19	+	1546	6	FSM	ENSG00000173581.8	ENST00000308964.7	1546	6	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	38.3384924064575	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCTCAGCCTCTTCCT	55647029	True	NA	NA	False	AATAAA	-1	NA	55648034	55653161	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55648278_55649001_55649078_55649204_55649310_55649407_55649585_55651282_55651496_55652429
transcript_111625.known	chr19	+	1592	6	FSM	ENSG00000173581.8	ENST00000591578.5	1592	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	73.6304284925736	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCTCAGCCTCTTCCT	55648053	True	NA	NA	False	AATAAA	-1	NA	55648232	55653161	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55648278_55648757_55649078_55649204_55649310_55649407_55649585_55651282_55651496_55652429
transcript_111626.known	chr19	+	1404	6	FSM	ENSG00000173581.8	ENST00000588740.5	1404	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	73.2322333402444	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCTCAGCCTCTTCCT	55648053	True	NA	NA	False	AATAAA	-1	NA	55648232	55653161	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55648278_55648945_55649078_55649204_55649310_55649407_55649585_55651282_55651496_55652429
transcript_111627.known	chr19	+	2093	5	FSM	ENSG00000173581.8	ENST00000586790.6	2093	5	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_3	7.79021822544144	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCTCAGCCTCTTCCT	55648140	False	NA	NA	False	AATAAA	-1	NA	55648211	55653161	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55649078_55649204_55649310_55649407_55649585_55651282_55651496_55652429
transcript_111631.known	chr19	+	591	2	FSM	ENSG00000171425.10	ENST00000585995.1	591	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGGCGGCCCCACGGCT	55638669	True	NA	NA	False	NA	NA	NA	55641030	55644990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55641184_55644552
transcript_111632.known	chr19	+	377	2	FSM	ENSG00000213015.9	ENST00000592461.5	377	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGGCTGCAGAGCCACCGC	55642052	False	NA	NA	False	NA	NA	NA	55642096	55642821	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55642149_55642496
transcript_111633.known	chr19	+	1100	2	FSM	ENSG00000171425.10	ENST00000588537.1	1100	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCACTCGAGGTTTGTTTT	55643694	True	NA	14	True	AATAAA	-16	NA	55643809	55645621	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55643841_55644552
transcript_111634.known	chr19	+	1156	2	FSM	ENSG00000213015.9	ENST00000325333.10	1156	2	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	0	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCAGGCTCTTCCTTGCG	55638640	True	NA	15	True	AATAAA	-15	NA	55641001	55643470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55641184_55642496
transcript_111635.known	chr19	+	1197	2	FSM	ENSG00000171425.10	ENST00000270451.6	1197	2	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_1	0	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTCGAGGTTTGTTTTTA	55637513	True	NA	16	True	AATAAA	-18	NA	55643648	55645623	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55643775_55644552
transcript_111638.known	chr19	+	2146	12	FSM	ENSG00000063244.13	ENST00000308924.9	2146	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	24.2728975138735	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCGGCTGTGTGTCCAG	55620905	True	NA	33	True	ATTAAA	-23	NA	55655034	55674716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55655154_55659209_55659346_55660176_55660222_55660515_55660620_55661037_55661190_55662501_55662619_55663605_55663745_55668506_55668587_55668669_55668793_55669082_55669182_55669443_55669693_55673933
transcript_111651.nnic	chr19	+	2419	12	NNC	ENSG00000063245.15	novel	16219	11	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	non_canonical	2	9	junction_7	177.218126789586	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCCAGATTCCCATCTGT	55675128	True	NA	31	True	AATAAA	-23	NA	55675184	55695766	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_55675436_55678526_55678856_55685395_55685646_55688869_55688995_55689296_55689372_55689866_55689951_55691753_55691813_55691886_55692058_55692685_55692797_55692950_55693038_55694725_55694984_55695147
transcript_111672.known	chr19	+	16219	11	FSM	ENSG00000063245.15	ENST00000270460.11	16219	11	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_8	83.227159028769	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAAACGTTCTTGTCT	55660007	True	NA	NA	False	ATTAAA	-21	NA	55675225	55709533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55675436_55678526_55678856_55685395_55685646_55688869_55688995_55689296_55689372_55689866_55689951_55691753_55692058_55692685_55692797_55692950_55693038_55694725_55694984_55695147
transcript_111674.nic	chr19	+	2557	11	NIC	ENSG00000063245.15	novel	16219	11	NA	NA	-108	0	combination_of_known_junctions	TRUE	canonical	3	264	junction_8	107.346914254672	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCCAGATTCCCATCTGT	55675086	False	NA	31	True	AATAAA	-23	NA	55675117	55695766	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_55675436_55678526_55678856_55685395_55685646_55688869_55688995_55689296_55689372_55689866_55689951_55691753_55692058_55692685_55692797_55692953_55693038_55694725_55694984_55695147
transcript_11168.known	chr1	-	5896	7	FSM	ENSG00000067334.14	ENST00000436063.7	5896	7	0	0	0	0	multi-exon	FALSE	canonical	3	722	junction_5	80.2650124414257	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCATTGTCACATAGTTT	-93868910	True	NA	NA	False	ATTAAA	-17	NA	93879206	93866283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_93869945_93870682_93870793_93872071_93872237_93873118_93873215_93875644_93875784_93876267_93877863_93879076
transcript_111685.nic	chr19	+	2398	10	NIC	ENSG00000063245.15	novel	2355	10	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_4	185.818310304567	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCCAGATTCCCATCTGT	55659986	True	NA	31	True	AATAAA	-23	NA	55675204	55695766	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_55675436_55678526_55678856_55685395_55685646_55688869_55688995_55689866_55689951_55691753_55692058_55692685_55692797_55692950_55693038_55694725_55694984_55695147
transcript_111686.known	chr19	+	2355	10	FSM	ENSG00000063245.15	ENST00000085079.11	2355	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	196.266510668215	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCCAGATTCCCATCTGT	55660026	True	NA	31	True	AATAAA	-23	NA	55675244	55695766	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_55675436_55678526_55678856_55685395_55685646_55688869_55688995_55689866_55689951_55691753_55692058_55692685_55692797_55692953_55693038_55694725_55694984_55695147
transcript_111699.known	chr19	+	1906	5	FSM	ENSG00000167685.15	ENST00000592949.5	1906	5	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_4	92.5401939699718	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGAGCTCTGTCTGGAGT	56136543	True	NA	22	True	AATAAA	-22	NA	56141320	56160893	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_56141358_56146246_56146421_56146889_56147209_56158493_56158603_56159626
transcript_111700.nic	chr19	+	1972	5	NIC	ENSG00000167685.15	novel	562	3	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	159.405928371563	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGAGCTCTGTCTGGAGT	56141508	True	NA	22	True	AATAAA	-22	NA	56141694	56160893	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_56141795_56146246_56146421_56146889_56147209_56158493_56158603_56159623
transcript_111701.known	chr19	+	568	3	FSM	ENSG00000167685.15	ENST00000587664.5	568	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	162.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCGCGGCCCTTTGCCTGC	56136535	True	NA	NA	False	NA	NA	NA	56141312	56160037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_56141358_56158493_56158603_56159623
transcript_111709.nic	chr19	-	2041	6	NIC	ENSG00000131848.10	novel	2151	6	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	15	junction_1	9.86711710683521	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATTGTATAACGGAAAAC	-56314110	True	NA	-15	True	AATAAA	-21	NA	56314863	56221311	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_56222327_56222590_56222742_56223630_56223835_56224662_56225049_56313282_56313385_56314680
transcript_111711.known	chr19	-	2151	6	FSM	ENSG00000131848.10	ENST00000683990.1	2151	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	10.0518654985033	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACGGAAAACTGAGTTTCC	-56314086	True	NA	-6	True	AATAAA	-30	NA	56314839	56221302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_56222327_56222590_56222742_56223630_56223835_56224662_56225174_56313282_56313385_56314680
transcript_111714.known	chr19	-	314	3	FSM	ENSG00000131848.10	ENST00000585670.5	314	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	19	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCAGTCTCAGGTATTC	-56314040	False	NA	NA	False	AATAAA	-18	NA	56314793	56280601	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_56280701_56313282_56313385_56314680
transcript_111718.known	chr19	+	945	6	FSM	ENSG00000240225.10	ENST00000589844.5	945	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	49.0444696168691	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAAAAGCCGTATGAATG	56367947	True	NA	NA	False	NA	NA	NA	56368138	56377366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_56368221_56368865_56368937_56373156_56373284_56373530_56373624_56374685_56374758_56376866
transcript_111720.known	chr19	+	980	6	FSM	ENSG00000240225.10	ENST00000468396.5	980	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	46.741844208375	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTACAAATGTAAGGAATGC	56368095	True	NA	NA	False	NA	NA	NA	56368172	56377208	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_56368461_56368865_56368937_56369278_56369338_56373156_56373284_56373530_56373624_56376866
transcript_111722.known	chr19	+	1989	6	FSM	ENSG00000240225.10	ENST00000488113.5	1989	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	40.2720746920245	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTTCTTCGGGTGCATT	56366742	True	NA	24	True	ATTAAA	-14	NA	56368318	56378350	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_56368461_56368865_56368937_56373156_56373284_56373530_56373624_56374685_56374758_56376866
transcript_111725.known	chr19	+	3440	6	FSM	ENSG00000240225.10	ENST00000490123.5	3440	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	45.6832573269464	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTCTAGCTTATTTGCAT	56367947	True	NA	15	True	AATAAA	-22	NA	56368138	56379553	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_56368461_56368865_56368937_56373156_56373284_56373530_56373624_56374685_56374826_56376866
transcript_111730.known	chr19	+	3393	5	FSM	ENSG00000240225.10	ENST00000495307.5	3393	5	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_4	29.6310647800581	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTTTGTCTTTTACTTTT	56366744	True	NA	26	True	AATAGA	-20	NA	56368320	56379828	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_56368461_56368865_56368937_56373156_56373284_56373530_56373624_56376866
transcript_111737.known	chr19	-	733	5	FSM	ENSG00000018869.18	ENST00000587778.5	733	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	6.86931583201704	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGAACTCCTTATTAAT	-56392881	False	NA	0	True	AATAAA	-20	NA	56393328	56384872	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_56385185_56390000_56390097_56390374_56390502_56391743_56391833_56393219
transcript_111738.known	chr19	-	712	5	FSM	ENSG00000018869.18	ENST00000593145.5	712	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	15.1554445662277	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTCTGGCAAAAGGAACTC	-56393091	True	NA	-9	True	AATAAA	-11	NA	56393538	56384881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_56385185_56390000_56390097_56390374_56390502_56391743_56391833_56393441
transcript_11174.known	chr1	-	499	2	FSM	ENSG00000067334.14	ENST00000528680.1	499	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTCCTACAGAAAAAACTAC	-93868868	True	NA	NA	False	NA	NA	NA	93879164	93877472	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_93877884_93879076
transcript_111746.known	chr19	+	4916	5	FSM	ENSG00000198440.9	ENST00000333201.13	4916	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	2.38484800354236	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTGTCAGACACGTGT	56404049	True	NA	NA	False	AATATA	-18	NA	56404331	56427364	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_56404453_56407025_56407124_56413958_56414086_56414344_56414441_56422890
transcript_111749.known	chr19	-	567	5	FSM	ENSG00000198046.13	ENST00000587555.5	567	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	18.3354165483089	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAACTTCATCAGAACATT	-56478010	False	NA	NA	False	TTTAAA	-42	NA	56478065	56442519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_56442742_56458154_56458248_56460688_56460816_56462337_56462430_56478032
transcript_111751.known	chr19	+	818	3	FSM	ENSG00000166770.12	ENST00000685306.1	1083	3	260	5	3	0	multi-exon	FALSE	canonical	3	41	junction_2	5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGATTTGTCTTCCTTATT	56476866	True	NA	14	True	AATAAA	-19	NA	56478133	56495437	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_56478382_56494162_56494343_56495047
transcript_111753.known	chr19	+	1503	2	FSM	ENSG00000166770.12	ENST00000654382.1	1503	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGATTTGTCTTCCTTATT	56476886	True	NA	14	True	AATAAA	-19	NA	56478153	56495437	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_56478382_56494162
transcript_111754.known	chr19	+	705	3	FSM	ENSG00000166770.12	ENST00000592146.4	730	3	24	1	-3	1	multi-exon	FALSE	canonical	3	20	junction_1	10.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTCTTCCTTATTCTTT	56476878	True	NA	18	True	AATAAA	-23	NA	56478145	56495441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_56478277_56494162_56494343_56495047
transcript_111757.known	chr19	+	4094	8	FSM	ENSG00000196867.8	ENST00000301318.8	4094	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	7.30389887495098	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTCAATATTGTTAAAATG	56538630	True	NA	NA	False	AATAAA	-41	NA	56538947	56556808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_56539227_56539624_56539717_56547507_56547635_56547806_56547903_56548957_56549122_56550066_56550182_56550509_56550606_56553683
transcript_111760.known	chr19	+	7194	6	FSM	ENSG00000197016.12	ENST00000330619.13	7194	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	12.0233106921513	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTGTGGTATATTGT	56566569	True	NA	7	True	AATAAA	-19	NA	56567467	56582894	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_56568039_56568757_56568884_56570279_56570372_56574393_56574521_56574637_56574734_56576712
transcript_111763.known	chr19	+	3558	4	FSM	ENSG00000197951.10	ENST00000599599.7	3558	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	29.743346594939	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAATGGAGTGTTAAAACA	56594202	True	NA	NA	False	AATAAA	-22	NA	56595301	56624486	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_56595429_56601506_56601592_56613811_56613939_56621267
transcript_111765.known	chr19	+	5428	3	FSM	ENSG00000197951.10	ENST00000328070.10	5428	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	1.5	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCAGTCAGTCAAGGTGGC	56594200	True	NA	NA	False	NA	NA	NA	56595299	56626481	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_56595429_56601506_56601592_56621267
transcript_111767.nnic	chr19	+	2305	3	NNC	ENSG00000197951.10	novel	5428	3	NA	NA	-32	-1058	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	36	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACTATGTTATTTTAAAC	56594168	True	NA	5	True	AATAAA	-15	NA	56595267	56623428	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_56595327_56601506_56601592_56621267
transcript_111769.known	chr19	-	3448	2	FSM	ENSG00000127903.14	ENST00000537055.4	3448	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGACTATAATCATTGGAA	NA	False	NA	NA	False	ATTAAA	-21	NA	56671757	56661979	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_56665246_56671575
transcript_11177.known	chr1	-	4883	7	FSM	ENSG00000023909.10	ENST00000370238.8	4883	7	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_5	10.9341463112378	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATAAAGCTATTTATGCAT	-93909362	False	155	NA	False	AATAAA	-24	NA	93909430	93885198	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_93889160_93894613_93894729_93896617_93896821_93897838_93897899_93901584_93901670_93904522_93904589_93909037
transcript_111770.known	chr19	+	774	3	FSM	ENSG00000083844.10	ENST00000600531.5	774	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGTGTCCGTTTCAAGT	57191098	True	NA	31	True	AATAAA	-40	NA	57191500	57194969	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57191947_57193874_57194002_57194768
transcript_111772.known	chr19	+	1287	7	FSM	ENSG00000105146.14	ENST00000302804.12	1287	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	4.32049379893857	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTCATAGTTGTGTGAG	57230954	True	NA	7	True	AATAAA	-21	NA	57231022	57235548	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57231307_57231741_57231788_57232032_57232225_57232541_57232681_57233459_57233609_57234883_57235059_57235246
transcript_111773.known	chr19	+	1125	6	FSM	ENSG00000105146.14	ENST00000598785.5	1125	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	2.65329983228432	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTTCATAGTTGTGTGA	57231512	True	NA	6	True	AATAAA	-20	NA	57231618	57235547	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57231788_57232032_57232225_57232541_57232681_57233459_57233609_57234883_57235059_57235246
transcript_111774.known	chr19	+	10169	4	FSM	ENSG00000204524.7	ENST00000414468.3	10169	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	5.31245915016974	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTTTGATGGATCTGTC	57238608	True	NA	30	True	ATTAAA	-43	NA	57240631	57262728	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57240922_57243922_57244050_57248604_57248701_57253072
transcript_111775.known	chr19	+	2037	3	FSM	ENSG00000197714.9	ENST00000537645.5	2037	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATCTTTCTTATTAGTT	57278050	False	NA	NA	False	NA	NA	NA	57280050	57292534	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57280125_57284550_57284678_57290698
transcript_111779.known	chr19	+	3850	3	FSM	ENSG00000197714.9	ENST00000360338.4	3850	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATAGATATATTTGTTTT	57276576	True	NA	NA	False	AATAAA	-26	NA	57280484	57294069	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57280837_57284550_57284678_57290698
transcript_111783.known	chr19	+	4258	1	FSM	ENSG00000268205.1	ENST00000593427.1	4258	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTGTGCCATGAACTGG	57304285	False	NA	NA	False	AATAAA	-25	NA	57304304	57308562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57304300_57308600
transcript_111787.known	chr19	+	3690	4	FSM	ENSG00000178229.8	ENST00000321545.5	3690	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	1.24721912892465	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTCAAAGCCTTTTTTAT	57319505	True	NA	NA	False	ATTAAA	-43	NA	57320471	57330770	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57320872_57323681_57323809_57326632_57326729_57327703
transcript_111789.known	chr19	+	3331	4	FSM	ENSG00000131845.15	ENST00000598744.1	3331	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	17.7200451466693	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTCCTGTGCTTGTGGA	57350425	True	NA	NA	False	NA	NA	NA	57351325	57358780	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57351698_57352654_57352736_57353724_57353852_57356029
transcript_111790.known	chr19	+	4423	3	FSM	ENSG00000131845.15	ENST00000282286.6	4423	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	4	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGCTGAATGATATTCC	57350370	True	NA	5	True	AATAAA	-23	NA	57351270	57359898	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57351698_57353724_57353852_57356029
transcript_111792.known	chr19	+	682	5	FSM	ENSG00000188785.12	ENST00000597047.1	682	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	33.1285375469549	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACAGAGTTCACATGGCA	57389071	True	NA	NA	False	NA	NA	NA	57390004	57398714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57390115_57390721_57390846_57394187_57394224_57397047_57397175_57398429
transcript_111793.known	chr19	+	589	4	FSM	ENSG00000188785.12	ENST00000597400.5	589	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	33.7441352929167	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCATCCTGAGCAACACA	57388941	True	NA	NA	False	NA	NA	NA	57389874	57398598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57390115_57394187_57394224_57397047_57397175_57398412
transcript_111795.known	chr19	+	2714	4	FSM	ENSG00000186272.13	ENST00000307658.12	2714	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	2.44948974278318	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGGGGAAGTGTCCTGAG	57410371	True	NA	29	True	AATAAA	-26	NA	57411160	57421934	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57411407_57413595_57413637_57417911_57418039_57419634
transcript_111797.known	chr19	+	533	3	FSM	ENSG00000186272.13	ENST00000595206.1	533	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	8.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACAGTGTTCACCTGGC	57410391	True	NA	NA	False	NA	NA	NA	57411180	57419900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57411407_57413595_57413637_57419634
transcript_111798.known	chr19	+	4207	3	FSM	ENSG00000186230.7	ENST00000334181.5	4207	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTTTACTTCATGAACTT	57431309	True	NA	NA	False	AATAAA	-21	NA	57435324	57447101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57435594_57441884_57442012_57443290
transcript_111801.known	chr19	-	737	3	FSM	ENSG00000197128.13	ENST00000600175.5	737	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	20.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGGCAGTTAGGTCACA	-57475928	True	NA	NA	False	NA	NA	NA	57477551	57466662	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_57467086_57476633_57476673_57477276
transcript_111803.known	chr19	-	1601	3	FSM	ENSG00000197128.13	ENST00000425074.3	1601	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	5.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGAGGTTCTTCCGAGTGC	-57475943	True	NA	NA	False	NA	NA	NA	57477566	57473149	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_57474422_57476633_57476673_57477276
transcript_111806.known	chr19	+	744	2	FSM	ENSG00000256060.3	ENST00000543226.2	744	2	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTACATTCTGTCTCATGT	57361376	True	NA	61	True	AATGAA	-21	NA	57363550	57365405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57363704_57364814
transcript_111808.known	chr19	+	433	2	FSM	ENSG00000186272.13	ENST00000599867.1	433	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGCTTTACCTGCACCAA	57410373	True	NA	NA	False	NA	NA	NA	57411162	57419823	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57411407_57419634
transcript_111809.known	chr19	+	677	2	FSM	ENSG00000186230.7	ENST00000597296.1	677	2	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTTTCGTCTTAAGTTT	57431331	True	NA	17	True	TTTAAA	-4	NA	57435346	57438457	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57435668_57438101
transcript_111810.nnic	chr19	+	634	2	NIC	ENSG00000186230.7	novel	677	2	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	3	144	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTTTCGTCTTAAGTTT	57431300	True	NA	17	True	TTTAAA	-4	NA	57435315	57438457	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_57435594_57438101
transcript_111811.known	chr19	+	1743	1	FSM	ENSG00000256060.3	ENST00000596755.1	1743	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTACATTGTAAATTACT	57361392	True	NA	20	True	AATAAA	-32	NA	57363566	57365309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57363600_57365300
transcript_111812.known	chr19	+	1857	4	FSM	ENSG00000105136.22	ENST00000442920.6	1857	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	13.7679176187089	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATGTGGACAATGTAGT	57486825	True	NA	NA	False	NA	NA	NA	57487717	57494220	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57487984_57491470_57491598_57492112_57492212_57492855
transcript_111813.nnic	chr19	+	771	4	NNC	ENSG00000105136.22	novel	3742	5	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	21.7460085737335	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTATGACCATTTCCAGA	57486845	True	NA	18	True	AATAAA	-18	NA	57487737	57494666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_57487984_57491470_57491598_57492112_57492212_57494367
transcript_111814.known	chr19	+	2277	4	FSM	ENSG00000152439.13	ENST00000282292.9	2277	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	15.5205956357638	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCACACTGGAGGCAGGAT	57499283	True	NA	NA	False	NA	NA	NA	57499937	57508229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57500114_57504656_57504787_57505301_57505401_57506357
transcript_111816.known	chr19	+	568	3	FSM	ENSG00000105136.22	ENST00000520540.5	568	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	21.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGATACCAAGGCAAGGGG	57486825	True	NA	NA	False	NA	NA	NA	57487717	57492284	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57487984_57491467_57491598_57492112
transcript_111817.known	chr19	+	572	2	FSM	ENSG00000105136.22	ENST00000523312.1	572	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCACAGCTGTGCAGGAAA	57486827	True	NA	NA	False	NA	NA	NA	57487719	57491778	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57487984_57491470
transcript_111819.known	chr19	-	3376	5	FSM	ENSG00000251369.9	ENST00000457177.5	3376	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	16.1477552619551	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGACTTGTTAGGATTT	-57558531	True	NA	1	True	ATTAAA	-21	NA	57559863	57541835	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_57543244_57546456_57547994_57552626_57552723_57556230_57556358_57559655
transcript_111821.known	chr19	+	4090	4	FSM	ENSG00000121406.9	ENST00000376233.8	4090	4	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	1.88561808316413	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTCTAATTTGTCTGTT	57526563	True	NA	2	True	AATGAA	-17	NA	57527355	57540876	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57527607_57531069_57531109_57535143_57535271_57537203
transcript_111824.nic	chr19	-	2370	4	ISM	ENSG00000251369.9	ENST00000447310.5	4305	6	-5	4220	-5	703	5prime_fragment	FALSE	canonical	3	55	junction_3	8.9938250421547	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTTTAAGGCTTTGATT	-57558536	True	NA	NA	False	ATTAAA	-33	NA	57559868	57546059	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_57547994_57552626_57552723_57556230_57556358_57559655
transcript_111827.nnic	chr19	-	2630	5	NNC	ENSG00000083817.9	novel	2545	4	NA	NA	-3	0	at_least_one_novel_splicesite	TRUE	canonical	2	4	junction_3	25.4103817366052	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTCTTAGGGTTTGG	-57577746	True	NA	-8	True	AATAAA	-20	NA	57578914	57571565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_57573702_57575803_57575931_57578056_57578099_57578246_57578329_57578671
transcript_111829.known	chr19	+	4291	4	FSM	ENSG00000171649.12	ENST00000597850.2	4291	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	37.6061460697879	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATGTTGAAACTTTACTC	57582447	True	NA	18	True	AATAAA	-18	NA	57584144	57593890	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57584390_57584951_57584991_57588538_57588666_57590010
transcript_11183.known	chr1	-	3008	6	FSM	ENSG00000023909.10	ENST00000615724.1	3008	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	46.9280300033999	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAGCGAGACTGCGTCTC	-93909388	False	206	NA	False	NA	NA	NA	93909456	93887033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_93889160_93894613_93894729_93896617_93896821_93897838_93897899_93901584_93901670_93909037
transcript_111833.known	chr19	-	2545	4	FSM	ENSG00000083817.9	ENST00000196489.4	2545	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	12.3558353285671	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTCTTAGGGTTTGG	-57577743	True	NA	-8	True	AATAAA	-20	NA	57578911	57571565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_57573702_57575803_57575931_57578056_57578099_57578671
transcript_111835.known	chr19	+	2860	3	FSM	ENSG00000171649.12	ENST00000599456.1	2860	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	53.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATAGGACCTAGAAATCT	57584247	False	NA	NA	False	TATAAA	-41	NA	57584259	57592390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57584613_57588538_57588666_57590010
transcript_111837.known	chr19	+	4144	3	FSM	ENSG00000171649.12	ENST00000536878.6	4144	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	66.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGTTGCCACCTGTATAT	57582442	True	NA	-95	True	NA	NA	NA	57584139	57593777	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57584390_57588538_57588666_57590010
transcript_111839.nnic	chr19	+	2400	3	NIC	ENSG00000171649.12	novel	2860	3	NA	NA	-24	-562	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	74.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGTAGTCTTGGGGTTC	57583880	False	NA	13	True	AATAAA	-18	NA	57584115	57591828	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_57584613_57588580_57588666_57590010
transcript_111843.known	chr19	+	4845	4	FSM	ENSG00000183647.11	ENST00000597700.6	4845	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	3.55902608401044	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACTTGATAAGTTCTGACA	57599021	True	NA	9	True	AATAAA	-21	NA	57599884	57610098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57600135_57600727_57600780_57604276_57604407_57605685
transcript_111846.known	chr19	+	634	4	FSM	ENSG00000183647.11	ENST00000597864.1	634	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	9.62635271879577	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGCTTGTAGTCATAGTT	57599039	True	NA	NA	False	AATAAA	-29	NA	57599902	57612722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57600135_57600727_57600780_57604276_57604407_57612502
transcript_111848.known	chr19	+	4793	3	FSM	ENSG00000183647.11	ENST00000332854.11	4793	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	14.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACTTGATAAGTTCTGACA	57599021	True	NA	9	True	AATAAA	-21	NA	57599884	57610098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57600135_57604276_57604407_57605685
transcript_111851.known	chr19	+	590	4	FSM	ENSG00000213762.12	ENST00000600883.1	590	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	112.197246945824	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACCAGGGTACACACCAT	57606414	True	NA	NA	False	NA	NA	NA	57614255	57620318	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57614504_57618791_57618878_57619411_57619509_57620159
transcript_111854.known	chr19	+	4924	3	FSM	ENSG00000213762.12	ENST00000396161.10	4924	3	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_1	16	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGACTCGTCACTGAATT	57606400	True	NA	18	True	AATAAA	-21	NA	57614241	57624724	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57614504_57619411_57619509_57620159
transcript_111859.known	chr19	+	559	2	FSM	ENSG00000213762.12	ENST00000597975.1	559	2	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGAGGCCTCAATTGTG	57606391	True	NA	NA	False	NA	NA	NA	57614232	57620447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57614504_57620159
transcript_11186.known	chr1	-	8952	23	FSM	ENSG00000137962.13	ENST00000260526.11	8952	23	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	8.03504719781249	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGAGTTACAAGTTTTA	-94236760	True	NA	NA	False	ATTAAA	-17	NA	94237584	94168904	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_94174750_94177611_94177721_94177851_94178168_94179724_94179958_94184150_94184289_94184871_94185061_94185341_94185482_94186498_94186598_94188836_94188942_94189215_94189353_94189925_94190084_94201719_94201858_94202543_94202733_94202917_94202999_94203099_94203211_94203929_94203995_94205060_94205199_94205634_94205684_94208831_94208905_94209253_94209351_94220257_94220393_94231406_94231644_94237414
transcript_111864.known	chr19	+	2759	6	FSM	ENSG00000121417.14	ENST00000540556.5	2759	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	16.3266653055668	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACCTTTATCTTGGCATT	57631837	True	NA	15	True	AATAAA	-16	NA	57633180	57642764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57633437_57633785_57633906_57634022_57634062_57634628_57634756_57639911_57640068_57640703
transcript_111865.known	chr19	+	2641	5	FSM	ENSG00000121417.14	ENST00000535785.1	2641	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	23.4773827331754	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACCTTTATCTTGGCATT	57631872	True	NA	15	True	AATAAA	-16	NA	57633215	57642764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57633437_57633712_57633906_57634022_57634062_57634628_57634756_57640703
transcript_111868.known	chr19	+	2577	5	FSM	ENSG00000121417.14	ENST00000299871.9	2577	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	17.4212513901843	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAATAATAAAAGCATTAT	57631872	True	NA	-12	True	NA	NA	NA	57633215	57642737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57633437_57634022_57634062_57634628_57634756_57639911_57640068_57640703
transcript_111870.known	chr19	+	2629	4	FSM	ENSG00000121417.14	ENST00000541801.5	2629	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	8.5764535535124	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTGATTCACTCTTTGA	57631823	True	NA	30	True	AATAAA	-31	NA	57633166	57642779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57633437_57634628_57634756_57639911_57640068_57640703
transcript_111873.known	chr19	+	3773	4	FSM	ENSG00000121417.14	ENST00000240731.5	3773	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	19.3045763140937	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTCTTCATATGTGCATT	57631824	True	NA	8	True	AATAAA	-16	NA	57633167	57644041	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57633437_57634022_57634062_57634628_57634756_57640703
transcript_111875.known	chr19	+	2472	3	FSM	ENSG00000121417.14	ENST00000347302.7	2472	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	22.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTGATTCACTCTTTGA	57631824	True	NA	30	True	AATAAA	-31	NA	57633167	57642779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57633437_57634628_57634756_57640703
transcript_111881.known	chr19	-	2567	5	FSM	ENSG00000179909.16	ENST00000451275.1	2567	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	14.7478812037526	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTGGCTTATTGAATCT	-57707326	True	NA	0	True	NA	NA	NA	57709194	57697366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_57697842_57700987_57701146_57701237_57702789_57704852_57704980_57708938
transcript_111886.known	chr19	-	5687	4	FSM	ENSG00000179909.16	ENST00000512439.6	5687	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	13.2748718344933	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTGGCTTATTGAATCT	-57707300	True	NA	0	True	NA	NA	NA	57709168	57697366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_57701146_57701237_57702789_57704852_57704980_57708938
transcript_111887.known	chr19	-	2903	4	FSM	ENSG00000083814.13	ENST00000600125.5	2903	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	18.263503375737	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATGTTGTGGGTTCTGTT	-57726627	True	NA	-2	True	AATAAA	-22	NA	57727613	57719750	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_57721698_57722315_57722439_57723213_57723341_57726907
transcript_111888.known	chr19	-	2431	4	FSM	ENSG00000083814.13	ENST00000317398.10	2431	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	3.68178700572909	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATGTTGTGGGTTCTGTT	-57726638	True	NA	-2	True	AATAAA	-22	NA	57727624	57719750	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_57721698_57722315_57722439_57723213_57723341_57727390
transcript_111889.known	chr19	+	4560	3	FSM	ENSG00000204519.11	ENST00000282296.10	4560	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	9	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTTCTTTATATGGATA	57679264	True	NA	22	True	AATAAA	-20	NA	57681976	57690648	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57682245_57685261_57685386_57686480
transcript_111892.known	chr19	+	593	2	FSM	ENSG00000204519.11	ENST00000599402.1	593	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCCCCCACGGACCTAC	57679294	True	NA	NA	False	NA	NA	NA	57682006	57686835	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57682245_57686480
transcript_111904.known	chr19	+	769	4	FSM	ENSG00000268750.7	ENST00000596498.2	769	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	21.3124898175277	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACGTTCTGCCCAGTTCA	57811048	True	NA	NA	False	NA	NA	NA	57819725	57858941	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57819946_57820493_57820550_57856106_57856234_57858575
transcript_11191.known	chr1	-	2043	11	FSM	ENSG00000137962.13	ENST00000370217.3	2043	11	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	8.72009174263666	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAGTGTTATTTTTTTTT	-94236809	True	NA	-75	True	AGTAAA	-20	NA	94237633	94201894	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_94202733_94202917_94202999_94203099_94203211_94203929_94203995_94205060_94205199_94205634_94205684_94208831_94208905_94209253_94209351_94220257_94220393_94231406_94231644_94237414
transcript_111911.known	chr19	+	576	4	FSM	ENSG00000268750.7	ENST00000604231.1	576	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	22.7303028283098	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGAGCAGGACTCCTAGG	57828266	True	NA	NA	False	NA	NA	NA	57830311	57858641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57830565_57839022_57839150_57856103_57856234_57858575
transcript_111917.known	chr19	-	461	4	FSM	ENSG00000204514.11	ENST00000600634.5	461	4	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_1	76.3675323681471	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTTCAGTGTGTGTGGTC	-57883998	False	4819	-2	True	AATAAA	-30	NA	57888817	57864758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_57864920_57868457_57868580_57876915_57877043_57888766
transcript_111920.known	chr19	+	2196	3	FSM	ENSG00000083828.16	ENST00000396154.7	2196	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	4.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTTTTCTCATACTTTAC	57768275	True	NA	47	True	NA	NA	NA	57769675	57780616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57769879_57776542_57776670_57778750
transcript_111922.known	chr19	+	606	3	FSM	ENSG00000268750.7	ENST00000598031.1	606	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	29	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGCCATTTGTCTTCCGC	57811128	True	NA	NA	False	AAGAAA	-20	NA	57819805	57858911	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_57819946_57856103_57856234_57858575
transcript_111927.known	chr19	-	2352	3	FSM	ENSG00000178935.5	ENST00000391701.1	2352	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	0.5	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGGGTGCTCTCCTGCA	-57813196	True	NA	-4	True	AATAAA	-17	NA	57814913	57807081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_57809104_57813293_57813421_57814710
transcript_111929.known	chr19	-	528	3	FSM	ENSG00000204514.11	ENST00000596604.5	528	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	44	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGGCTCTGCGTGAATTA	-57884101	False	NA	-2	True	AATAAA	-22	NA	57888920	57850314	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_57850562_57876915_57877043_57888766
transcript_111933.nnic	chr19	-	524	2	NIC	ENSG00000204514.11	novel	648	4	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	3	89	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGACGGCTCTGCGTG	-57884229	True	NA	-7	True	AATAAA	-17	NA	57889048	57850319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_57850562_57888766
transcript_111934.known	chr19	-	3547	7	FSM	ENSG00000196724.13	ENST00000425570.7	3547	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	20.1301321958457	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTACAGGGACTCATGCCT	-57933310	True	NA	-10	True	AATAAA	-14	NA	57935387	57922265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_57922630_57923191_57923290_57925622_57928048_57930427_57930558_57932429_57932647_57933816_57933903_57935160
transcript_11194.known	chr1	+	3604	23	FSM	ENSG00000117528.14	ENST00000370214.9	3604	23	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_13	14.4360230094919	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGTGTCTCTTTTTTAA	94416622	True	NA	16	True	AATAAA	-18	NA	94418388	94518663	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_94418589_94458606_94458644_94464774_94464874_94467918_94468008_94473765_94473836_94475142_94475241_94475613_94475738_94478258_94478316_94480463_94480607_94483169_94483240_94487541_94487612_94487693_94487792_94487891_94487984_94489724_94489817_94489902_94489976_94491183_94491248_94498601_94498680_94498782_94498849_94498944_94499035_94499494_94499615_94506537_94506643_94515145_94515203_94517051
transcript_111942.known	chr19	-	2207	3	FSM	ENSG00000152454.4	ENST00000282308.4	2207	3	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	1.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTTTTATATTTAGTAT	-57944598	True	NA	-15	True	AATAAA	-21	NA	57947706	57940832	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_57942648_57943933_57944061_57947441
transcript_111943.known	chr19	-	1958	2	FSM	ENSG00000152454.4	ENST00000598928.1	1958	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTTAGGTAACACACATAG	-57944567	True	NA	-106	True	AAAACA	-23	NA	57947675	57940923	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_57942648_57947441
transcript_111944.known	chr19	-	4087	7	FSM	ENSG00000166704.13	ENST00000551380.7	4080	7	-7	0	-7	0	multi-exon	FALSE	canonical	3	57	junction_1	13.0437298687488	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTTACCTGGTTTCTCT	-58002027	True	NA	-23	True	AATAAA	-25	NA	58002827	57977075	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_57980280_57988206_57988303_57988594_57988722_57999807_57999897_58000682_58000740_58001288_58001371_58002395
transcript_111946.known	chr19	-	4225	7	FSM	ENSG00000166704.13	ENST00000341164.9	4225	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_6	26.0496321151246	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTTACCTGGTTTCTCT	NA	False	NA	-23	True	AATAAA	-25	NA	58003349	57977075	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_57980280_57988206_57988303_57988594_57988722_57999807_57999897_58000682_58000740_58001288_58001371_58002779
transcript_111948.known	chr19	+	1919	4	FSM	ENSG00000176593.8	ENST00000313957.8	1919	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	2.62466929133727	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAACGGGGGTGTCTTTT	58001935	True	NA	NA	False	ATTAAA	-10	NA	58002871	58007206	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58003047_58003210_58003337_58004382_58004701_58005906
transcript_111949.known	chr19	-	1196	4	FSM	ENSG00000166704.13	ENST00000547121.5	1196	4	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	7.71722460186015	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTGGAGCTCAGCTTT	-58002019	True	NA	NA	False	NA	NA	NA	58002819	57999263	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_57999897_58000682_58000740_58001288_58001371_58002395
transcript_111950.known	chr19	-	2680	4	FSM	ENSG00000166704.13	ENST00000547828.5	2680	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	35.8143360495021	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATGCTGTCATCCCTCA	-58002019	True	NA	NA	False	AATAAA	-21	NA	58002819	57997395	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_57999897_58000682_58000740_58001288_58001371_58002779
transcript_111953.known	chr19	+	852	3	FSM	ENSG00000176593.8	ENST00000547364.1	852	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCGGCAGTACCTTGCCCG	58001984	True	NA	NA	False	NA	NA	NA	58002920	58009930	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58003047_58003210_58003337_58009330
transcript_111954.known	chr19	-	651	3	FSM	ENSG00000166704.13	ENST00000552184.1	651	3	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	9	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGATCTGTCTCTGTGCA	-58001995	True	NA	NA	False	AATAGA	-33	NA	58002795	58000570	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58000740_58001288_58001371_58002395
transcript_111957.known	chr19	+	813	3	FSM	ENSG00000152467.10	ENST00000601162.1	813	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	3	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTCCATCTGTCCTGTGG	58033925	True	NA	3	True	ATTAAA	-18	NA	58034105	58038442	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58034162_58035969_58036012_58037727
transcript_111960.known	chr19	-	2779	7	FSM	ENSG00000121413.13	ENST00000240727.10	2779	7	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_6	44.0167266186642	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGATCTTTTCATTGATTG	-58095451	True	NA	-21	True	ACTAAA	-18	NA	58098210	58083838	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58085380_58086173_58086267_58086905_58087009_58087315_58087405_58088687_58088838_58089864_58090387_58097929
transcript_111961.nic	chr19	-	2615	7	NIC	ENSG00000121413.13	novel	2779	7	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_6	30.9515750810843	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCCTTGGGCTACATAA	-58095492	True	NA	-41	True	AATAAA	-28	NA	58098251	58083858	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_58085380_58086173_58086267_58086905_58087009_58087315_58087405_58088687_58088838_58089864_58090387_58098114
transcript_111962.known	chr19	-	2539	7	FSM	ENSG00000121413.13	ENST00000601144.6	2539	7	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_6	23.5772960470214	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTTGGGCTACATAAGGT	-58095472	True	NA	-38	True	AATAAA	-31	NA	58098231	58083855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58085380_58086173_58086267_58086905_58087009_58087315_58087405_58088687_58088838_58089864_58090387_58098173
transcript_111964.known	chr19	+	3334	5	FSM	ENSG00000176293.20	ENST00000313434.10	3334	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	10.1980390271856	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCATTGGCTGTTTTTGGT	58058533	True	NA	NA	False	NA	NA	NA	58059281	58069755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58059311_58059968_58060036_58061579_58061707_58063445_58063542_58066740
transcript_11197.known	chr1	+	884	9	FSM	ENSG00000117528.14	ENST00000315713.5	884	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	31.1277609217239	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTTGTACTTATTGTTT	94416712	False	NA	NA	False	AATAAA	-23	NA	94418478	94478723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_94418589_94458606_94458644_94464774_94464874_94467918_94468008_94473765_94473836_94475142_94475241_94475613_94475738_94478258_94478316_94478523
transcript_111973.known	chr19	-	761	3	FSM	ENSG00000121413.13	ENST00000600845.1	761	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	41.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGCCCAGCTAGCCTG	-58095444	True	NA	NA	False	NA	NA	NA	58098203	58088687	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58088838_58089864_58090387_58098114
transcript_111979.nnic	chr19	+	3041	9	NNC	ENSG00000171606.18	novel	2808	8	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_7	48.5629424046773	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTGTGTATTTCCTGCC	NA	False	NA	33	True	AATAAA	-22	NA	58183049	58213562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_58183443_58183920_58183999_58185711_58185839_58186946_58187043_58206719_58207203_58209960_58210074_58210208_58210431_58211559_58211687_58212160
transcript_111983.known	chr19	+	2447	8	FSM	ENSG00000171606.18	ENST00000326804.8	2447	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	42.0301155392761	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGTAGAACCTGTGT	58182068	True	NA	23	True	AATAAA	-12	NA	58183426	58213552	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58183443_58183920_58183999_58185696_58185839_58186946_58187043_58206719_58207203_58209960_58210074_58211559_58211687_58212160
transcript_111987.nnic	chr19	+	2701	8	NNC	ENSG00000171606.18	novel	2808	8	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.2963307136297	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTGTGTATTTCCTGCC	58182476	True	NA	33	True	AATAAA	-22	NA	58183059	58213562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_58183335_58183920_58183999_58185711_58185839_58186946_58187043_58206719_58207203_58209960_58210074_58211559_58211687_58212160
transcript_111989.known	chr19	+	2678	7	FSM	ENSG00000171606.18	ENST00000345813.7	2678	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	44.088610270177	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGTAGAACCTGTGTAT	58182503	True	NA	25	True	AATAAA	-14	NA	58183086	58213554	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58183443_58183920_58183999_58185711_58185839_58206719_58207203_58209960_58210074_58211559_58211687_58212160
transcript_11199.known	chr1	-	2298	6	FSM	ENSG00000117525.14	ENST00000334047.12	2298	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	7.78203058333749	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGACTGCACTTCTTCTC	-94541251	True	NA	53	True	AATACA	-15	NA	94541759	94529172	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_94530597_94532320_94532481_94533089_94533269_94535964_94536165_94540256_94540369_94541536
transcript_111997.known	chr19	+	2539	5	FSM	ENSG00000171606.18	ENST00000424679.6	2539	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	49.2366733238549	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTGTGTATTTCCTGCC	NA	False	NA	33	True	AATAAA	-22	NA	58183028	58213562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58183443_58206719_58207203_58209960_58210074_58211559_58211687_58212160
transcript_111998.nnic	chr19	+	2271	5	NNC	ENSG00000171606.18	novel	4852	2	NA	NA	-3736	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	47.2513227328082	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTGTGTATTTCCTGCC	58204282	True	NA	33	True	AATAAA	-22	NA	58204361	58213562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_58204508_58206719_58207203_58209960_58210074_58211559_58211687_58212160
transcript_11200.known	chr1	-	1879	5	FSM	ENSG00000117525.14	ENST00000370207.4	1879	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	12.1037184369102	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTATTCTATCTTCCATT	-94541129	False	NA	-5	True	AATAAA	-25	NA	94541637	94529309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_94530597_94533089_94533269_94535964_94536165_94540256_94540369_94541536
transcript_11201.known	chr1	-	5956	6	FSM	ENSG00000224081.10	ENST00000634870.1	5956	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	2.0591260281974	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTTCAACTGCAAAAGAA	-94819981	True	NA	NA	False	NA	NA	NA	94820277	94613813	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_94617072_94622718_94624610_94638436_94638559_94679424_94679608_94732257_94732438_94819955
transcript_112013.nic	chr19	+	3152	7	FSM	ENSG00000198131.15	ENST00000687789.1	3302	7	-21	171	-21	-6	multi-exon	TRUE	canonical	3	102	junction_6	46.593096770516	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGGAAATTTCCCTGCCA	58224917	True	NA	0	True	AATAAA	-11	NA	58228892	58263473	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58228947_58229467_58229571_58230393_58230463_58243964_58244057_58246300_58246428_58246710_58246795_58260850
transcript_112014.nic	chr19	+	3323	7	FSM	ENSG00000198131.15	ENST00000687789.1	3302	7	-21	0	-21	0	multi-exon	FALSE	canonical	3	102	junction_6	46.593096770516	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGAGTCTGCAGTTTCT	58224917	True	NA	NA	False	AATAAA	-18	NA	58228892	58263644	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58228947_58229467_58229571_58230393_58230463_58243964_58244057_58246300_58246428_58246710_58246795_58260850
transcript_112017.nnic	chr19	+	763	7	NNC	ENSG00000198131.15	novel	555	7	NA	NA	-21	-2648	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_6	62.030682372158	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCATTTGTGGTATGTTGT	58224917	True	NA	12	True	AATAAA	-19	NA	58228892	58274599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_58228947_58229467_58229571_58230393_58230463_58243964_58244057_58246300_58246428_58246710_58246795_58274365
transcript_112018.known	chr19	+	588	7	FSM	ENSG00000198131.15	ENST00000594384.5	588	7	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_5	60.9562684772179	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTATTAGGAAAAGTGCAAG	58224938	True	NA	4	True	NA	NA	NA	58228913	58260965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58228947_58229467_58229571_58230393_58230463_58243964_58244057_58246300_58246428_58246745_58246795_58260850
transcript_11202.known	chr1	-	2982	5	FSM	ENSG00000224081.10	ENST00000635408.2	3236	5	216	38	37	2	multi-exon	FALSE	canonical	1	4	junction_1	2.73861278752583	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTTTAGGGGTTAATAA	-94820028	False	NA	NA	False	NA	NA	NA	94820059	94616389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_94617072_94622718_94624610_94638436_94638559_94679424_94679608_94819955
transcript_112027.nic	chr19	+	3600	7	NIC	ENSG00000198131.15	novel	3516	7	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	66.8779983751508	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGAGTCTGCAGTTTCT	58224950	True	NA	NA	False	AATAAA	-18	NA	58228925	58263644	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_58229257_58229467_58229571_58230393_58230463_58243964_58244057_58246300_58246428_58246710_58246795_58260850
transcript_11203.known	chr1	+	2045	15	FSM	ENSG00000143036.17	ENST00000529450.5	2045	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_11	5.92469752952221	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTTGTCATTATTGTT	94820181	False	NA	2	True	AATAAA	-16	NA	94820400	94895053	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_94820479_94820948_94821057_94824492_94824636_94827506_94827548_94828492_94828587_94837710_94837872_94839947_94840038_94841999_94842125_94845277_94845465_94857334_94857501_94864742_94864900_94867333_94867418_94891129_94891268_94892280_94892518_94894817
transcript_112030.known	chr19	+	3516	7	FSM	ENSG00000198131.15	ENST00000596825.5	3516	7	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	73.7829022651364	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGAGTCTGCAGTTTCT	58224999	True	NA	NA	False	AATAAA	-18	NA	58228974	58263644	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58229257_58229467_58229571_58230393_58230463_58243964_58244057_58246300_58246428_58246745_58246795_58260850
transcript_112035.nnic	chr19	+	3109	5	NNC	ENSG00000278129.2	novel	9110	4	NA	NA	-8	814	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	23.710493457539	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTAACTGTTTCAAATTAA	58275322	True	NA	6	True	AATAAA	-13	NA	58278946	58303605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_58279148_58285716_58285844_58286109_58286206_58294097_58296490_58303312
transcript_112038.known	chr19	-	2512	5	FSM	ENSG00000283103.4	ENST00000634676.2	2512	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	154.753029049515	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTTATCTCTTTGTCTT	-58323722	True	NA	NA	False	NA	NA	NA	58326935	58310351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58312289_58312969_58313114_58314805_58315037_58325274_58325362_58326822
transcript_11204.known	chr1	+	2381	15	FSM	ENSG00000143036.17	ENST00000271227.11	2381	15	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_5	3.68394198806504	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTTAGCAGAAATCTCT	94820137	True	NA	NA	False	AATAAA	-22	NA	94820356	94895246	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_94820479_94820948_94821057_94824492_94824636_94827506_94827644_94828492_94828587_94837710_94837872_94839947_94840038_94841999_94842125_94845277_94845465_94857334_94857501_94864742_94864900_94867330_94867418_94891129_94891268_94892280_94892518_94894817
transcript_112040.known	chr19	+	9110	4	FSM	ENSG00000278129.2	ENST00000621650.2	9110	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	8.05536398239638	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATGTGTGCAGACTGT	58275330	True	NA	14	True	AATAAA	-14	NA	58278954	58302791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58279148_58285716_58285844_58286109_58286206_58294097
transcript_112042.nnic	chr19	+	925	4	NNC	ENSG00000142396.10	novel	1469	4	NA	NA	26	1	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_3	142.18298069741	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTGTCTGTCTCATTT	58299807	True	NA	15	True	NA	NA	NA	58305344	58315204	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_58305446_58306087_58306217_58312165_58312404_58314747
transcript_112044.known	chr19	+	1469	4	FSM	ENSG00000142396.10	ENST00000413518.5	1469	4	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_3	40.4749579644281	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTGGATGTATATTTT	NA	False	NA	34	True	TATAAA	-32	NA	58305318	58315663	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58305446_58306087_58306217_58312165_58312463_58314747
transcript_112048.known	chr19	+	922	4	FSM	ENSG00000142396.10	ENST00000427361.5	922	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	132.969503604732	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTTTTGTCTGTCTCAT	58299836	True	NA	13	True	NA	NA	NA	58305373	58315202	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58305446_58306087_58306217_58312196_58312463_58314747
transcript_112055.known	chr19	-	3057	4	FSM	ENSG00000283103.4	ENST00000664481.1	3057	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	97.8172899963101	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATTACCATTATAGTTT	-58326844	False	NA	NA	False	GATAAA	-41	NA	58326942	58309726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58312289_58312969_58313114_58314805_58315037_58326822
transcript_112059.known	chr19	+	4654	3	FSM	ENSG00000182318.6	ENST00000329665.5	4654	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	3	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGTGTAAAGACAAATTC	58326467	True	NA	4	True	AATAAA	-20	NA	58326993	58342332	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58327115_58334751_58335206_58338253
transcript_112062.nic	chr19	-	790	3	ISM	ENSG00000283103.4	ENST00000651375.3	2818	5	-28	4356	-24	0	5prime_fragment	FALSE	canonical	3	298	junction_1	12.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCAATTGCCGGTTGGT	-58327178	False	NA	-29	True	AATAAA	-20	NA	58327276	58314787	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_58315037_58325274_58325362_58326822
transcript_112063.known	chr19	+	616	2	FSM	ENSG00000142396.10	ENST00000434052.5	616	2	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAACAGGAGAGGGAGGAT	58299839	True	NA	NA	False	NA	NA	NA	58305376	58306634	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58305446_58306087
transcript_112064.known	chr19	-	2708	2	FSM	ENSG00000268516.3	ENST00000597230.3	2726	2	18	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGCTTTGTGTGTTTCGT	-58278782	False	NA	-4	True	AATACA	-23	NA	58278808	58257269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58259692_58278522
transcript_112065.known	chr19	-	683	2	FSM	ENSG00000283103.4	ENST00000669440.2	687	2	4	0	0	0	multi-exon	FALSE	canonical	3	209	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCGGTTGGTGGTTCACC	-58327150	True	NA	-21	True	AATAAA	-28	NA	58327248	58314779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58315037_58326822
transcript_112066.known	chr19	+	218	3	FSM	ENSG00000198131.15	ENST00000599714.1	218	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	111	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTCCTGGTGTGTTTTTTG	58229453	False	NA	NA	False	ATTAAA	-32	NA	58229470	58231820	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58229571_58230393_58230463_58231771
transcript_112071.known	chr19	-	792	4	FSM	ENSG00000174586.11	ENST00000595763.1	792	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGGAGGCCCCGGCAGGG	-58362620	True	NA	NA	False	NA	NA	NA	58362825	58357438	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58357650_58357951_58358287_58358488_58358586_58362676
transcript_112074.known	chr19	+	977	3	FSM	ENSG00000268895.6	ENST00000593960.5	977	3	0	0	0	0	multi-exon	TRUE	canonical	3	6	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGAGTTGAGGCGACTGC	58347380	True	NA	NA	False	NA	NA	NA	58347752	58354502	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58347845_58353378_58353475_58353713
transcript_112076.known	chr19	+	1762	3	FSM	ENSG00000269054.3	ENST00000663335.1	1762	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGTTAGGGGAAGCCTGTG	58362414	True	NA	NA	False	AATAAA	-4	NA	58362607	58367593	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58362753_58364535_58364593_58366033
transcript_112077.known	chr19	-	3465	3	FSM	ENSG00000174586.11	ENST00000311044.8	3465	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGGGGAGGATGCAGTG	-58362546	True	NA	NA	False	AATAAA	-16	NA	58362751	58354356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58357650_58358488_58358586_58362676
transcript_112079.known	chr19	+	1056	2	FSM	ENSG00000268895.6	ENST00000600686.1	1056	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACTGGGGGAGAATGCAT	58347416	True	NA	NA	False	NA	NA	NA	58347788	58354713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58347845_58353713
transcript_112080.known	chr19	-	475	2	FSM	ENSG00000121410.12	ENST00000598345.1	475	2	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAATGTCTTTGGACTCC	-58346153	True	NA	-10	True	AATAAA	-19	NA	58347657	58346859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58347030_58347352
transcript_112081.known	chr19	-	2261	2	FSM	ENSG00000174586.11	ENST00000425453.3	2261	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCACCTGTGTAGGTCT	-58362643	True	NA	NA	False	NA	NA	NA	58362848	58355560	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58357650_58362676
transcript_112084.known	chr19	-	2038	3	FSM	ENSG00000152475.7	ENST00000427624.2	2038	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCCACAGGCTTCCCCTAA	-58380728	True	NA	-7	True	ATTAAA	-20	NA	58381022	58367617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58369362_58369716_58369929_58380940
transcript_112085.known	chr19	-	1939	3	FSM	ENSG00000152475.7	ENST00000597582.2	1939	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCGTCCACAGGCTTCC	-58380736	True	NA	-12	True	ATTAAA	-15	NA	58381030	58367622	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58369362_58369818_58369929_58380940
transcript_112086.known	chr19	+	741	6	FSM	ENSG00000083845.9	ENST00000196551.8	741	6	0	0	0	0	multi-exon	FALSE	canonical	3	7831	junction_5	450.338539323474	5088	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCTGTTGTCTGTCTT	58285770	True	NA	45	True	AATAAA	-31	NA	58387268	58394804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58387340_58388136_58388246_58392975_58393186_58393358_58393488_58394496_58394596_58394681
transcript_112087.known	chr19	+	800	7	FSM	ENSG00000083845.9	ENST00000598495.5	800	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3857.0755185186	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACCTGTGCTGTTGTCTG	58285770	True	NA	41	True	AATAAA	-27	NA	58387268	58394800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58387340_58388136_58388246_58388417_58388481_58392975_58393186_58393358_58393488_58394496_58394596_58394681
transcript_112088.known	chr19	+	536	5	FSM	ENSG00000083845.9	ENST00000598098.5	536	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	3588.99856331819	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCTGTTGTCTGTCTT	58285765	True	NA	45	True	AATAAA	-31	NA	58387263	58394804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58387340_58388136_58388246_58393358_58393488_58394496_58394596_58394681
transcript_112089.known	chr19	+	1520	5	FSM	ENSG00000083845.9	ENST00000596046.1	1520	5	0	0	0	0	multi-exon	FALSE	canonical	3	7831	junction_4	354.831914432735	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGTTGTCTGTCTTCG	58285790	True	NA	47	True	AATAAA	-33	NA	58387288	58394806	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58388246_58392975_58393186_58393358_58393488_58394496_58394596_58394681
transcript_11209.known	chr1	+	2061	14	FSM	ENSG00000143036.17	ENST00000467909.5	2061	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	5.42621295032258	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTTGTCATTATTGTT	94820575	False	NA	2	True	AATAAA	-16	NA	94820620	94895053	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_94820724_94824492_94824636_94827506_94827644_94828492_94828587_94837710_94837872_94839947_94840038_94841999_94842125_94845277_94845465_94857334_94857501_94864742_94864900_94867330_94867418_94891129_94891268_94892280_94892518_94894817
transcript_112093.known	chr19	+	2288	5	FSM	ENSG00000171574.18	ENST00000599238.5	2288	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5.31507290636732	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTATTTTTTTTT	58408369	True	NA	27	True	AATAAA	-27	NA	58408751	58418327	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58409166_58410005_58410092_58415523_58415647_58415792_58415941_58416810
transcript_112095.known	chr19	+	1042	5	FSM	ENSG00000171574.18	ENST00000322834.7	1042	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	4.76313972081441	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAGAAGTGCTTTCAAGAA	58408394	True	NA	NA	False	NA	NA	NA	58408776	58417091	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58409166_58409964_58410092_58415523_58415647_58415818_58415941_58416810
transcript_112097.known	chr19	+	2308	4	FSM	ENSG00000171574.18	ENST00000306910.9	2308	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	11.8977121983832	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTATTTTTTTTT	58408266	True	NA	27	True	AATAAA	-27	NA	58408648	58418327	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58409166_58409940_58410092_58415523_58415647_58416810
transcript_112098.known	chr19	+	2187	4	FSM	ENSG00000171574.18	ENST00000593920.5	2187	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	9.41629792788369	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAAGCCGCTTAAAATTT	58408305	True	NA	10	True	AATAAA	-10	NA	58408687	58418310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58409166_58410005_58410092_58415523_58415647_58416810
transcript_112100.nic	chr19	+	2276	4	NIC	ENSG00000171574.18	novel	2308	4	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	9.7410927974683	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTATTTTTTTTT	58408274	True	NA	27	True	AATAAA	-27	NA	58408656	58418327	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_58409166_58409964_58410092_58415523_58415647_58416810
transcript_112101.known	chr19	+	591	3	FSM	ENSG00000171574.18	ENST00000596921.5	591	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	14.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTAACCCCCGAAAAATT	58401473	False	NA	NA	False	NA	NA	NA	58401503	58417119	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58401663_58415523_58415647_58416810
transcript_112102.nic	chr19	+	2157	3	NIC	ENSG00000171574.18	novel	2308	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	9.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTATTTTTTTTT	58408266	True	NA	27	True	AATAAA	-27	NA	58408648	58418327	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_58409166_58415523_58415647_58416810
transcript_112103.known	chr19	-	2962	3	FSM	ENSG00000131849.13	ENST00000254166.4	2962	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	0.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTAATCTTAGGGGTTCT	-58440032	True	NA	-5	True	AATAAA	-20	NA	58440153	58432813	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58435212_58437046_58437216_58439758
transcript_112104.known	chr19	+	2978	4	FSM	ENSG00000249471.8	ENST00000336614.9	2978	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.05480466765633	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCGTGTGGACCTCCACA	58451416	True	NA	31	True	AATAGA	-15	NA	58451621	58457833	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58451705_58453695_58453823_58454227_58454345_58455182
transcript_112106.nnic	chr19	+	2154	7	NNC	ENSG00000083838.17	novel	3922	7	NA	NA	-235	0	intron_retention	FALSE	canonical	0	0	junction_5	8.73212459828649	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATATGGAGTTTCTGAAT	58475600	False	NA	NA	False	CATAAA	-11	NA	58475910	58481224	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_58476197_58477178_58477561_58477636_58477827_58478086_58478182_58479642_58479705_58479929_58480020_58480175
transcript_112107.nic	chr19	+	2216	7	NIC	ENSG00000083838.17	novel	3922	7	NA	NA	-274	0	intron_retention	FALSE	canonical	3	13	junction_6	4.7169905660283	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATATGGAGTTTCTGAAT	58475561	False	NA	NA	False	CATAAA	-11	NA	58475871	58481224	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_58476197_58477178_58477561_58477636_58477827_58478086_58478182_58479642_58479728_58479929_58480020_58480175
transcript_112108.known	chr19	+	2050	7	FSM	ENSG00000083838.17	ENST00000594369.6	2050	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	8.07602762639048	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGTTTCTGAATAAGAAT	58476325	True	NA	NA	False	CATAAA	-17	NA	58476351	58481230	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58476505_58477178_58477561_58477636_58477827_58478086_58478182_58479642_58479728_58479929_58480020_58480175
transcript_112115.known	chr19	+	5054	4	FSM	ENSG00000083812.13	ENST00000196482.4	5054	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	2.49443825784929	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGAGGGAAACCTCCAC	58466769	True	NA	NA	False	AATAAA	-21	NA	58467079	58475436	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58467184_58469179_58469307_58469727_58469845_58470730
transcript_112118.known	chr19	-	643	3	FSM	ENSG00000083807.10	ENST00000594786.1	643	3	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	1	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTATGTCTGCGTGGAT	-58497459	True	NA	-3	True	AATAAA	-20	NA	58499275	58498332	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58498692_58498784_58498916_58499122
transcript_112124.known	chr19	-	2352	3	FSM	ENSG00000119574.13	ENST00000354590.7	2352	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	65	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGAGCACCTGGATCAG	-58519542	False	NA	-6	True	AATAAA	-32	NA	58519554	58513529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58514311_58516394_58517674_58519262
transcript_112125.nnic	chr19	-	2355	3	NNC	ENSG00000119574.13	novel	2352	3	NA	NA	-77	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	68	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGAGCACCTGGATCAG	-58519624	False	NA	-6	True	AATAAA	-32	NA	58519636	58513529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_58514311_58516394_58517674_58519341
transcript_112126.known	chr19	-	2159	3	FSM	ENSG00000119574.13	ENST00000600990.1	2159	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	61.5	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGGACTGTAGGCCATG	-58519739	False	NA	-42	True	GGGGCT	-23	NA	58519751	58513565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58514311_58516394_58517674_58519616
transcript_112128.known	chr19	-	2129	3	FSM	ENSG00000119574.13	ENST00000594051.6	2129	3	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_2	20	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGAGCACCTGGATCAG	-58518726	True	NA	-6	True	AATAAA	-32	NA	58519810	58513529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58514311_58516394_58517674_58519741
transcript_112135.nic	chr19	+	2515	17	NIC	ENSG00000130726.12	novel	3364	17	NA	NA	-37	0	combination_of_known_junctions	TRUE	canonical	3	602	junction_1	673.62247169687	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCAGGCGTTGGCTGGTTG	58544016	False	NA	34	True	AATAAA	-14	NA	58544026	58550715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_58544212_58545424_58545538_58545763_58545897_58547375_58547512_58547596_58547714_58547791_58547907_58548033_58548181_58548293_58548409_58548485_58548593_58548739_58548777_58548861_58548911_58548987_58549241_58549330_58549651_58549736_58549861_58549948_58550036_58550146_58550285_58550376
transcript_112142.known	chr19	+	2709	15	FSM	ENSG00000130726.12	ENST00000341753.10	2709	15	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	845.542550130762	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCAGGCGTTGGCTGGTTG	58498944	True	NA	34	True	AATAAA	-14	NA	58544472	58550715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58545098_58547375_58547512_58547596_58547714_58547791_58547907_58548033_58548181_58548293_58548409_58548485_58548593_58548739_58548777_58548861_58548911_58548987_58549241_58549330_58549651_58549736_58549861_58549948_58550036_58550146_58550285_58550376
transcript_112145.nic	chr19	-	1113	6	FSM	ENSG00000130724.10	ENST00000597848.2	1208	6	-19	114	2	0	multi-exon	FALSE	canonical	3	29	junction_5	394.083442940705	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCAGGCCCATGTGACT	-58542634	True	NA	-11	True	AATAAA	-16	NA	58555009	58551565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58551777_58551905_58551968_58552054_58552186_58552258_58552439_58554044_58554237_58554672
transcript_112148.known	chr19	-	885	6	FSM	ENSG00000130724.10	ENST00000601220.5	885	6	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_5	258.970577479373	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCAGGCCCATGTGACT	-58542598	True	NA	-11	True	AATAAA	-16	NA	58554973	58551565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58551777_58551905_58551968_58552054_58552186_58552258_58552439_58554044_58554237_58554864
transcript_112149.known	chr19	-	894	6	FSM	ENSG00000130724.10	ENST00000312547.7	894	6	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_5	250.73380306612	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCAGGCCCATGTGACT	-58542730	True	NA	-11	True	AATAAA	-16	NA	58555105	58551565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58551777_58551905_58551968_58552054_58552186_58552258_58552439_58554044_58554237_58554987
transcript_112156.nnic	chr19	-	1391	7	NNC	ENSG00000130725.8	novel	734	7	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_6	718.903717861826	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTCTGCTTCTTACTTC	-58558946	False	NA	-5	True	ATTAAA	-17	NA	58558965	58555711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_58556230_58556315_58556380_58556686_58556791_58556891_58556931_58557062_58557158_58558272_58558355_58558476
transcript_112158.known	chr19	-	734	7	FSM	ENSG00000130725.8	ENST00000595957.5	734	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	746.62271075974	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCGGGGTGGCTACATCG	-58554456	True	NA	NA	False	NA	NA	NA	58558954	58556140	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58556230_58556315_58556380_58556686_58556791_58556891_58556931_58557062_58557158_58558272_58558355_58558693
transcript_112161.known	chr19	-	1159	6	FSM	ENSG00000130725.8	ENST00000253023.8	1159	6	0	0	0	0	multi-exon	FALSE	canonical	3	1868	junction_1	103.157355530277	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTCTGCTTCTTACTTC	-58548531	True	NA	-5	True	ATTAAA	-17	NA	58558611	58555711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58556230_58556315_58556380_58556686_58556791_58556891_58556931_58557062_58557158_58558272
transcript_112164.known	chr19	-	2666	6	FSM	ENSG00000099326.9	ENST00000215057.7	2666	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	12.7499019604074	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGTCTCCACCCACTCAG	-58572930	True	NA	-29	True	AATAAA	-14	NA	58573335	58561931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58563505_58569276_58569398_58569515_58569587_58570343_58570528_58570993_58571430_58573054
transcript_112165.known	chr19	-	2587	6	FSM	ENSG00000099326.9	ENST00000599369.5	2587	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	13.2604675634006	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGGTCTCCACCCACTCA	NA	False	NA	-30	True	AATAAA	-13	NA	58573575	58561932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_58563505_58569276_58569398_58569515_58569587_58570343_58570528_58570993_58571430_58573372
transcript_112170.known	chr19	+	944	3	FSM	ENSG00000286104.1	ENST00000473164.1	944	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	2.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATTTGACTAGAACTCAA	58573308	True	NA	NA	False	NA	NA	NA	58575455	58599575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58575589_58586154_58586357_58598966
transcript_112171.known	chr19	+	3282	2	FSM	ENSG00000213753.11	ENST00000493504.1	3282	2	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	0	307	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTACTCTTTGTTGTGTT	58573312	True	NA	12	True	AATAAA	-23	NA	58575459	58584397	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_58575589_58581244
transcript_112176.known	chr2	-	3880	2	FSM	ENSG00000184731.6	ENST00000327669.5	3880	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGATTTATGAGTTTGAG	-46116	True	NA	-4	True	AATAAA	-21	NA	46505	38813	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_41628_45439
transcript_11218.known	chr1	-	1991	7	FSM	ENSG00000117519.16	ENST00000370206.9	1991	7	0	0	0	0	multi-exon	FALSE	canonical	3	3021	junction_2	173.54986475234	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAACCACAGGCTGATTA	-94908475	True	NA	-6	True	AATAAA	-20	NA	94927110	94896956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_94898084_94899370_94899518_94901668_94901786_94902120_94902259_94903121_94903189_94903402_94903525_94926837
transcript_112189.known	chr2	-	1744	10	FSM	ENSG00000035115.22	ENST00000356150.10	1744	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	78.6822018558765	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCAATTTTGTTTTTCT	-264013	False	1235	-8	True	AATAAA	-25	NA	264032	218143	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219002_224863_224921_229965_230045_231022_231192_233100_233230_234159_234273_247537_247603_249730_249845_253004_253116_263983
transcript_112190.known	chr2	-	1999	10	FSM	ENSG00000035115.22	ENST00000463865.5	1999	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	76.9845262630785	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAATATTTCAATTTTGTT	-264373	False	NA	-13	True	AATAAA	-20	NA	264392	218148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219002_224863_224921_229965_230045_231022_231192_233100_233230_234159_234273_247537_247603_249730_249845_253004_253116_264083
transcript_112195.known	chr2	-	1695	9	FSM	ENSG00000035115.22	ENST00000403712.6	1695	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_8	58.102146044703	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTTCTTATTTTTT	-264013	False	1235	0	True	AATAAA	-33	NA	264032	218135	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219002_229965_230045_231022_231192_233100_233230_234159_234273_247537_247603_249730_249845_253004_253116_263983
transcript_112202.known	chr2	+	546	7	FSM	ENSG00000143727.16	ENST00000442386.5	546	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	1199.09749626774	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTCAGGTGCTGCAGAG	245865	True	NA	NA	False	NA	NA	NA	264899	277261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_265008_269300_269348_271865_271940_272036_272151_275139_275202_276979_277086_277226
transcript_112211.known	chr2	+	1474	6	FSM	ENSG00000143727.16	ENST00000272065.10	1474	6	0	0	0	0	multi-exon	FALSE	canonical	3	2047	junction_3	312.497423989383	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGTCTGCCTGTTTTT	245912	True	NA	94	True	AATAAA	-36	NA	264946	278283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_265008_271865_271940_272036_272151_275139_275202_276979_277086_277226
transcript_112212.known	chr2	+	1552	6	FSM	ENSG00000143727.16	ENST00000272067.10	1552	6	0	0	0	0	multi-exon	FALSE	canonical	3	504	junction_2	1042.8108936907	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGTCTGCCTGTTTTT	245834	True	NA	94	True	AATAAA	-36	NA	264868	278283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_265008_271865_271940_272191_272306_275139_275202_276979_277086_277226
transcript_112213.known	chr2	+	689	5	FSM	ENSG00000143727.16	ENST00000413140.5	689	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	1182.7350717722	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTTATGGGGTATTTTAA	245858	True	NA	14	True	AATAAA	-16	NA	264892	277506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_265008_271865_271940_272036_272151_276979_277086_277226
transcript_112218.known	chr2	-	2572	6	FSM	ENSG00000151353.15	ENST00000432667.5	2572	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	124.764418004494	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGGTCTCAGGTAGTATC	-673805	True	NA	NA	False	ATTAAA	-20	NA	677406	667972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_669676_669756_669851_672807_672863_675509_675631_675757_676239_677288
transcript_112224.known	chr2	-	654	5	FSM	ENSG00000151353.15	ENST00000405941.3	654	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	117.172949096624	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTTTCAGCCAGCACTG	-673103	False	NA	NA	False	TTTAAA	-31	NA	676704	669422	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_669676_669756_669851_672807_672863_675509_675631_676573
transcript_112225.known	chr2	-	6187	5	FSM	ENSG00000151353.15	ENST00000281017.8	6187	5	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_4	32.4913450014	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTCTGTAAGTTACTG	-673805	True	NA	2	True	AATAAA	-32	NA	677406	663876	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_669676_669756_669851_672807_672863_675509_675631_677288
transcript_11223.known	chr1	-	1974	6	FSM	ENSG00000117519.16	ENST00000394202.8	1974	6	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_3	1246.83641268612	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCTGATTATTTTCTGG	-94927125	True	NA	2	True	AATAAA	-28	NA	94927223	94896948	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_94898084_94899370_94899518_94901668_94901786_94903121_94903189_94903402_94903525_94926837
transcript_112236.known	chr2	-	539	2	ISM	ENSG00000235688.3	ENST00000456949.3	869	3	491	0	429	0	3prime_fragment	FALSE	canonical	3	77	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTCTGACTCCGACTTG	-950209	False	NA	-6	True	AATAAA	-29	NA	950274	949626	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_949802_949910
transcript_112240.known	chr2	+	1907	17	FSM	ENSG00000172554.12	ENST00000308624.10	1907	17	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_14	25.8087164297258	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGGGTCCTCCTTGTTAAA	947198	True	NA	12	True	AATAAA	-21	NA	950848	1367613	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_951069_1083517_1083656_1098195_1098253_1098352_1098411_1137621_1137666_1137767_1137810_1165547_1165636_1173091_1173184_1209102_1209231_1237887_1238018_1239737_1239777_1247326_1247444_1259369_1259442_1267364_1267572_1308493_1308587_1316264_1316376_1367342
transcript_112274.nic	chr2	+	800	2	ISM	ENSG00000172554.12	ENST00000452177.5	1818	8	-47	77602	-28	-77602	5prime_fragment	FALSE	canonical	3	132	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCCCCAAAAGCCACCATG	947170	True	NA	NA	False	AATAGA	-45	NA	950820	1084069	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_951069_1083517
transcript_112277.known	chr2	-	1641	2	FSM	ENSG00000203635.2	ENST00000366424.2	1641	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGGGAGCTACAATTCAAGA	-1624464	True	NA	NA	False	NA	NA	NA	1625419	1620509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_1621980_1625248
transcript_112280.known	chr2	-	6817	23	FSM	ENSG00000130508.11	ENST00000252804.9	6817	23	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_19	72.8008718501967	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGCTTTATTTTTTTTT	-1727494	True	NA	-1	True	AATAAA	-22	NA	1744515	1631886	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_1634324_1635407_1635522_1638845_1638979_1639301_1639423_1643367_1643577_1644617_1644753_1648171_1649676_1653627_1653786_1654399_1654509_1660880_1661038_1662071_1662185_1663604_1663764_1664957_1665075_1666213_1666487_1673642_1673813_1676926_1677045_1680192_1680363_1683655_1683728_1684079_1684152_1687631_1687704_1691927_1692000_1693062_1693135_1744255
transcript_112281.nic	chr2	-	5580	22	NIC	ENSG00000130508.11	novel	6817	23	NA	NA	-133	0	combination_of_known_junctions	FALSE	canonical	3	165	junction_19	84.1166450669798	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	-1744632	False	NA	7	True	NA	NA	NA	1744648	1633184	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_1634324_1635407_1635522_1638845_1638979_1639301_1639423_1643367_1643577_1644617_1644753_1648171_1649676_1653627_1653786_1654399_1654509_1660880_1661038_1662071_1662185_1663604_1663764_1664957_1665075_1666213_1666487_1673642_1673813_1676926_1677045_1680192_1680363_1683655_1683728_1684079_1684152_1691927_1692000_1693062_1693135_1744255
transcript_112304.known	chr2	-	1657	9	FSM	ENSG00000032389.13	ENST00000382125.9	1657	9	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_6	12.5343278639104	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGCTCGGCTCATTCTT	-3375882	True	NA	-5	True	AATAAA	-17	NA	3377818	3188969	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_3189509_3192413_3192582_3193998_3194167_3196880_3197018_3214148_3214249_3257298_3257456_3338016_3338150_3354549_3354634_3377647
transcript_112307.nic	chr2	-	1564	8	NIC	ENSG00000032389.13	novel	1657	9	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_5	63.0140897752565	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGCTCGGCTCATTCTT	-3375946	True	NA	-5	True	AATAAA	-17	NA	3377882	3188969	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_3189509_3192413_3192582_3193998_3194167_3196880_3197018_3214148_3214249_3338016_3338150_3354549_3354634_3377647
transcript_11231.known	chr1	+	1614	4	FSM	ENSG00000235501.7	ENST00000438509.3	1615	4	0	1	0	0	multi-exon	FALSE	canonical	3	11	junction_3	5.31245915016974	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTGTTACTATGTGCTT	94926459	True	NA	5	True	AATAAA	-20	NA	94927365	94963270	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_94928403_94931871_94931986_94961316_94961434_94962924
transcript_11232.known	chr1	+	1514	4	FSM	ENSG00000235501.7	ENST00000659935.1	1514	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	6.12825877028341	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTGTTACTATGTGCTT	94926505	True	NA	5	True	AATAAA	-20	NA	94927411	94963270	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_94928403_94931871_94931986_94961316_94961434_94962978
transcript_112326.known	chr2	+	2499	12	FSM	ENSG00000171853.16	ENST00000324266.10	2499	12	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_9	16.764780083248	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTCTGCTGCGTGTCT	3375596	True	NA	12	True	AATAAA	-13	NA	3379693	3479565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_3379877_3387619_3388671_3401776_3401894_3421880_3421995_3424524_3424664_3443778_3443892_3457620_3457694_3460262_3460337_3465596_3465696_3477694_3477796_3478845_3478934_3479218
transcript_112329.known	chr2	+	2483	12	FSM	ENSG00000171853.16	ENST00000382110.6	2483	12	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	37.5063630965103	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTCTGCTGCGTGTCTTC	3375577	True	NA	14	True	AATAAA	-15	NA	3379674	3479567	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_3379840_3387619_3388671_3401776_3401894_3421880_3421995_3424524_3424664_3443778_3443892_3457620_3457694_3460262_3460337_3465596_3465696_3477694_3477796_3478845_3478934_3479218
transcript_11233.known	chr1	+	1334	3	FSM	ENSG00000235501.7	ENST00000657603.1	1334	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	11	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCTATGAAGAAACATATT	94926571	True	NA	-46	True	NA	NA	NA	94927477	94963219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_94928403_94931871_94931986_94962924
transcript_112336.nnic	chr2	+	2418	11	NIC	ENSG00000171853.16	novel	2499	12	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_3	42.6568869000071	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTCTGCTGCGTGTCT	3375563	True	NA	12	True	AATAAA	-13	NA	3379660	3479565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_3379877_3387619_3388671_3401776_3401894_3424524_3424664_3443778_3443892_3457620_3457694_3460262_3460337_3465596_3465696_3477694_3477796_3478845_3478934_3479218
transcript_11234.known	chr1	+	1418	3	FSM	ENSG00000235501.7	ENST00000659966.1	1418	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	11.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTTAATAAAGCTTTTTAT	94926454	True	NA	-25	True	AAGAAA	-8	NA	94927360	94963240	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_94928403_94931871_94931986_94962978
transcript_112344.nnic	chr2	+	3852	9	NNC	ENSG00000171853.16	novel	2499	12	NA	NA	-14	1656	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_8	43.4523805446836	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATGTATTCATACGTTT	3375563	True	NA	8	True	AATAAA	-23	NA	3379660	3462598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_3379877_3387619_3388671_3401776_3401894_3421880_3421995_3424524_3424664_3443778_3443892_3457620_3457694_3460262_3460337_3460643
transcript_11235.known	chr1	-	9375	4	FSM	ENSG00000172339.10	ENST00000370205.6	9375	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	10.077477638554	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATGTGTTACATATATGA	-95072068	True	NA	NA	False	AATAAA	-20	NA	95072951	94974404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_94983307_95027128_95027261_95064865_95065018_95072762
transcript_112359.known	chr2	+	1538	2	FSM	ENSG00000171853.16	ENST00000482645.1	1538	2	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAATATGGAAAAATATA	3375622	True	NA	1	True	AATAAA	-14	NA	3379719	3389000	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_3379877_3387619
transcript_112360.known	chr2	-	908	2	FSM	ENSG00000225234.1	ENST00000453806.1	908	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCACTTTGGGAGGCCGAG	NA	False	NA	NA	False	NA	NA	NA	3482409	3481241	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_3481886_3482145
transcript_112361.known	chr2	-	2181	4	FSM	ENSG00000182551.14	ENST00000327435.11	2181	4	0	0	0	0	multi-exon	FALSE	canonical	3	588	junction_3	17.9876500843094	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTTTGAATTTTGACAA	-3511600	True	NA	NA	False	AATAAA	-16	NA	3519531	3497365	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_3499083_3500813_3500994_3513856_3513977_3519367
transcript_112364.nic	chr2	-	307	2	ISM	ENSG00000182551.14	ENST00000327435.11	2181	4	-36	16504	-36	-15209	5prime_fragment	FALSE	canonical	3	588	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATGAAGAAAAGGTAAGGG	-3511636	True	NA	NA	False	GATAAA	-9	NA	3519567	3513869	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_3513977_3519367
transcript_112376.known	chr2	-	2120	8	FSM	ENSG00000171865.10	ENST00000436842.5	2120	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_7	139.158403355636	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGTAGTA	-3548673	True	NA	NA	False	NA	NA	NA	3558289	3544792	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_3545872_3547930_3548056_3548639_3548725_3549057_3549113_3550372_3550473_3552143_3552309_3556788_3556905_3557894
transcript_112377.known	chr2	-	5289	8	FSM	ENSG00000171865.10	ENST00000315212.4	5289	8	0	0	0	0	multi-exon	TRUE	canonical	3	391	junction_6	19.1439232112534	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTCGTCTTTGTCTTCT	-3548717	True	NA	-1	True	AATAAA	-33	NA	3558333	3541429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_3545872_3547930_3548056_3548639_3548725_3549057_3549113_3550372_3550473_3552143_3552309_3556788_3556905_3558132
transcript_11239.known	chr1	+	6805	7	FSM	ENSG00000152078.10	ENST00000370203.9	6805	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	4.37480158280223	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTCTGCAAGGTGTATA	95116901	True	NA	5	True	AATAAA	-23	NA	95117354	95197607	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_95117618_95143890_95144057_95148701_95148792_95150207_95150267_95151324_95151420_95173815_95173890_95191549
transcript_112390.known	chr2	+	1115	3	FSM	ENSG00000234171.4	ENST00000438436.4	1275	3	160	0	160	0	multi-exon	FALSE	canonical	3	46	junction_1	38	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATTGTTAATTTTGTATA	3558603	False	NA	NA	False	AATAAA	-39	NA	3558627	3561734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_3558999_3559403_3559730_3561316
transcript_112391.known	chr2	+	4333	3	FSM	ENSG00000234171.4	ENST00000664922.2	4344	3	11	0	6	0	multi-exon	FALSE	canonical	3	74	junction_1	24	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCCATCTCTACTAAAAAT	3558173	True	NA	NA	False	NA	NA	NA	3558473	3564842	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_3558999_3559447_3559730_3561316
transcript_112392.known	chr2	+	836	2	FSM	ENSG00000234171.4	ENST00000426725.2	982	2	139	7	110	-3	multi-exon	FALSE	canonical	3	51	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACATTGTTAATTTTGT	3558553	False	NA	NA	False	AATAAA	-36	NA	3558577	3561731	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_3558999_3561316
transcript_112396.known	chr2	-	1213	2	FSM	ENSG00000287126.1	ENST00000671571.1	1213	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCCAGCCCATCTAGGAA	-3574819	False	NA	NA	False	NA	NA	NA	3574830	3569442	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_3569960_3574134
transcript_112397.known	chr2	-	3700	2	FSM	ENSG00000287126.1	ENST00000656939.1	3700	2	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAAACATTTAAAGAAAA	-3574897	True	NA	NA	False	AATAAA	-16	NA	3575100	3568504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_3571239_3574134
transcript_112398.known	chr2	+	732	7	FSM	ENSG00000171863.15	ENST00000645674.2	732	7	0	0	0	0	multi-exon	FALSE	canonical	3	8025	junction_1	2006.39458288299	4432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTCAGTTATGTTTTT	3398566	True	NA	4	True	AATAAA	-20	NA	3575259	3580920	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_3575351_3575591_3575685_3575816_3575889_3576486_3576631_3577709_3577775_3580109_3580261_3580804
transcript_112399.known	chr2	+	557	7	FSM	ENSG00000171863.15	ENST00000647131.1	557	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	4509.54013422901	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAACAAAAATGACTAAAT	3398627	True	NA	-38	True	NA	NA	NA	3575320	3580878	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_3575351_3575591_3575685_3575816_3575889_3576558_3576631_3577709_3577775_3580109_3580261_3580804
transcript_112400.known	chr2	+	710	7	FSM	ENSG00000171863.15	ENST00000646909.1	710	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	4560.37805450382	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTTCAGTTATGTTTT	3398622	True	NA	3	True	AATAAA	-19	NA	3575315	3580919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_3575351_3575556_3575685_3575816_3575889_3576486_3576631_3577709_3577775_3580109_3580261_3580804
transcript_112401.known	chr2	+	704	7	FSM	ENSG00000171863.15	ENST00000406376.1	704	7	0	0	0	0	multi-exon	TRUE	canonical	3	561	junction_1	4366.22497766154	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTATATATTCACAGTACT	3398664	True	NA	-15	True	AATAAA	-1	NA	3575357	3580901	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_3575449_3575600_3575685_3575816_3575889_3576486_3576631_3577709_3577775_3580109_3580261_3580804
transcript_112406.known	chr2	+	764	7	FSM	ENSG00000171863.15	ENST00000403564.5	764	7	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	4488.40633991868	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTTCAGTTATGTTTT	3398631	True	NA	3	True	AATAAA	-19	NA	3575324	3580919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_3575449_3575591_3575685_3575816_3575889_3576486_3576631_3577709_3577775_3580109_3580261_3580804
transcript_112407.known	chr2	+	554	5	FSM	ENSG00000171863.15	ENST00000491937.6	554	5	0	0	0	0	multi-exon	FALSE	canonical	3	8025	junction_1	1900.738589996	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTCTAGATGTAAAACAT	3398629	True	NA	NA	False	NA	NA	NA	3575322	3577926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_3575351_3575591_3575685_3575816_3575889_3576486_3576631_3577709
transcript_112410.known	chr2	+	907	6	FSM	ENSG00000171863.15	ENST00000462576.5	907	6	0	0	0	0	multi-exon	FALSE	canonical	3	8437	junction_5	1662.60884154993	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTTCAGTTATGTTTT	3398631	True	NA	3	True	AATAAA	-19	NA	3575324	3580919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_3575685_3575816_3575889_3576486_3576631_3577709_3577775_3580109_3580261_3580804
transcript_112411.known	chr2	+	511	3	FSM	ENSG00000171863.15	ENST00000479123.1	511	3	0	0	0	0	multi-exon	FALSE	canonical	3	11262	junction_2	521	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGAAAAAATAAGTTTTAAA	3574874	False	NA	NA	False	NA	NA	NA	3575632	3576873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_3575685_3575816_3575889_3576486
transcript_112412.known	chr2	+	1425	7	FSM	ENSG00000118004.18	ENST00000349077.9	1425	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.37436854187255	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACTAAATGTGTGGAGTCA	3595081	True	NA	NA	False	AAAACA	-24	NA	3595111	3644644	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_3595169_3604314_3604471_3613310_3613383_3637532_3637605_3640277_3640332_3643443_3643540_3643726
transcript_112413.known	chr2	+	1746	2	FSM	ENSG00000236106.3	ENST00000413960.2	1769	2	11	12	11	-12	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATATGTGAGTGGCTGC	5726388	True	NA	NA	False	AATAAA	-4	NA	5726448	5730342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_5726580_5728727
transcript_112415.known	chr2	+	5720	9	FSM	ENSG00000151692.15	ENST00000320892.11	5720	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	7.96770826524164	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGCGTGGCTCCGTCTTT	6916483	True	NA	22	True	AATACA	-16	NA	6917411	7044179	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_6917623_6940947_6941148_6996915_6997062_7014453_7014559_7014711_7014773_7020472_7020681_7024368_7024517_7030125_7030216_7039628
transcript_112419.known	chr2	+	243	2	FSM	ENSG00000235576.2	ENST00000690653.1	1204	2	91	870	3	-16	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGTGCCTTGCTATGAT	NA	False	NA	NA	False	ATTAAA	-14	NA	7725800	7730705	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_7725854_7730515
transcript_112439.nnic	chr2	+	2320	2	Antisense	novelGene_ENSG00000226506.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	244	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTATTATTCTTAAATAC	7871533	True	NA	25	True	AATAAA	-17	NA	7876673	7891784	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr2_+_7878482_7891272
transcript_112441.nnic	chr2	+	1686	2	Antisense	novelGene_ENSG00000226506.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	244	junction_1	0	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAAGAGTCATCTTCCCT	7877429	True	NA	14	True	AATAAA	-15	NA	7877791	7892268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr2_+_7878482_7891272
transcript_112444.known	chr2	+	1299	3	FSM	ENSG00000115738.10	ENST00000396290.2	1299	3	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_2	8	176	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCGAGTGGTTTTTAAGAT	8680704	True	NA	NA	False	AATAAA	-25	NA	8682055	8684461	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_8682514_8682842_8682907_8683684
transcript_112449.nic	chr2	-	6277	29	NIC	ENSG00000134313.17	novel	7248	29	NA	NA	0	312	combination_of_known_junctions	FALSE	canonical	3	90	junction_1	18.416766706411	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAATTCTTTTTCTGGAA	-8834454	True	NA	NA	False	AAGAAA	-7	NA	8837630	8729888	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_8731983_8733443_8733681_8734654_8734754_8736867_8737000_8747886_8748001_8750111_8750336_8751465_8751645_8770669_8770833_8776747_8776893_8778638_8778728_8778895_8779140_8779673_8779815_8785740_8786031_8786205_8786358_8788646_8788813_8789879_8790060_8791059_8791225_8793809_8793988_8796770_8796870_8798201_8798301_8800399_8800499_8802929_8803128_8806270_8806370_8812394_8812494_8813236_8813336_8817617_8817717_8818694_8818794_8826985_8827130_8837479
transcript_112450.nic	chr2	-	4744	29	NIC	ENSG00000134313.17	novel	7248	29	NA	NA	0	531	combination_of_known_junctions	FALSE	canonical	3	90	junction_1	18.416766706411	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATGACAAAGACAGAAAAGC	-8834454	True	NA	-14	True	NA	NA	NA	8837630	8731421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_8731983_8733443_8733681_8734654_8734754_8736867_8737000_8747886_8748001_8750111_8750336_8751465_8751645_8770669_8770833_8776747_8776893_8778638_8778728_8778895_8779140_8779673_8779815_8785740_8786031_8786205_8786358_8788646_8788813_8789879_8790060_8791059_8791225_8793809_8793988_8796770_8796870_8798201_8798301_8800399_8800499_8802929_8803128_8806270_8806370_8812394_8812494_8813236_8813336_8817617_8817717_8818694_8818794_8826985_8827130_8837479
transcript_112456.nic	chr2	-	2127	16	ISM	ENSG00000134313.17	ENST00000689114.1	4389	22	-17	16743	0	1802	5prime_fragment	FALSE	canonical	3	97	junction_5	15.0766928292204	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGATTTCCTTCCTTCCTT	-8834454	True	NA	NA	False	NA	NA	NA	8837630	8786204	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_8786358_8788646_8788813_8789879_8790060_8791059_8791225_8793809_8793988_8796770_8796870_8798201_8798301_8800399_8800499_8802929_8803128_8806270_8806370_8812394_8812494_8813236_8813336_8817617_8817717_8818694_8818794_8826985_8827130_8837479
transcript_112457.known	chr2	-	7248	29	FSM	ENSG00000134313.17	ENST00000473731.5	7248	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_28	27.5640256530878	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGACTCATGAATTTTTA	-8834454	True	NA	-5	True	AATAAA	-14	NA	8837630	8728928	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_8731983_8733443_8733681_8734654_8734754_8736867_8737000_8747886_8748001_8750111_8750336_8751465_8751645_8770669_8770833_8776747_8776893_8778638_8778728_8778895_8779140_8779673_8779815_8785740_8786031_8786205_8786358_8788646_8788813_8789879_8790060_8791059_8791225_8793809_8793988_8796770_8796870_8798201_8798301_8800399_8800499_8802929_8803128_8806270_8806370_8812394_8812494_8813236_8813336_8817617_8817717_8818694_8818794_8826985_8827130_8837468
transcript_112460.known	chr2	-	7622	13	FSM	ENSG00000143797.12	ENST00000305997.8	7622	13	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_3	17.1535143791456	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTGTGTGTGTTTGCTAA	-9002872	True	NA	1	True	ATTAAA	-17	NA	9003684	8852689	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_8858905_8860612_8860765_8862589_8862723_8864169_8864235_8868445_8868550_8873107_8873301_8877029_8877214_8882510_8882566_8888017_8888074_8908620_8908717_8943186_8943265_8958496_8958643_9003539
transcript_112462.nic	chr2	-	2174	13	NIC	ENSG00000143797.12	novel	7622	13	NA	NA	-38	229	combination_of_known_junctions	FALSE	canonical	3	7	junction_3	39.2204418072458	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTTTTCTTAAAGTATGTC	-9003729	False	NA	-15	True	AATAAA	-17	NA	9003747	8858119	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_8858905_8860612_8860765_8862270_8862323_8864169_8864235_8868445_8868550_8873107_8873301_8877029_8877214_8882510_8882566_8888017_8888074_8908620_8908717_8943186_8943265_8958496_8958643_9003539
transcript_112480.known	chr2	+	5582	27	FSM	ENSG00000151693.11	ENST00000315273.4	5582	27	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_22	14.8946994265046	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTTTTAATGTTTTTA	9204358	True	NA	16	True	AATAAA	-21	NA	9206764	9405683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_9207231_9279316_9279390_9297299_9297446_9318523_9318599_9320287_9320338_9323120_9323251_9327825_9327912_9334737_9334814_9335092_9335180_9344531_9344636_9344730_9344801_9350807_9350896_9356046_9356096_9356178_9356346_9358755_9358890_9368424_9368520_9374754_9374945_9376907_9376994_9378943_9379060_9380740_9380809_9385244_9385359_9388293_9388547_9393481_9393648_9400022_9400073_9400741_9400831_9401273_9401397_9403252
transcript_112485.nnic	chr2	-	1713	8	NNC	ENSG00000119185.13	novel	4153	7	NA	NA	-45	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	118.513927537687	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGTCCATTTAAAAGTAT	NA	False	NA	-18	True	AATAAA	-2	NA	9423573	9405683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_9406011_9406286_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9423372
transcript_112493.known	chr2	-	4859	8	FSM	ENSG00000119185.13	ENST00000360635.7	4859	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	143.157968977045	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCTCTGAGTTTTTAAAA	-9423187	False	3074	NA	False	TATAAA	-23	NA	9423229	9403474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9419989_9420101_9422478
transcript_112494.nic	chr2	-	1073	8	NIC	ENSG00000119185.13	novel	4859	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_6	139.782338086098	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAACTCTCAATGAAGTC	-9420449	True	NA	NA	False	ATTAAA	-21	NA	9423523	9406660	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9419989_9420101_9423372
transcript_112504.nic	chr2	-	1600	7	NIC	ENSG00000119185.13	novel	4859	8	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_6	114.118968138031	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAACTCTCAATGAAGTC	-9423225	False	NA	NA	False	ATTAAA	-21	NA	9423267	9406660	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9422478
transcript_112507.known	chr2	-	4153	7	FSM	ENSG00000119185.13	ENST00000355346.9	4153	7	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_6	41.1933112154011	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCTCTGAGTTTTTAAAA	-9420454	True	NA	NA	False	TATAAA	-23	NA	9423528	9403474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9423372
transcript_112511.known	chr2	-	874	7	FSM	ENSG00000119185.13	ENST00000488451.5	874	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	154.665948274194	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGAGTTAACTCTCAAT	-9420406	True	NA	NA	False	ATTAAA	-15	NA	9423480	9406666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_9406906_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9419989_9420101_9423372
transcript_112518.nic	chr2	-	876	6	NIC	ENSG00000119185.13	novel	4153	7	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_5	124.364946829885	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAACTCTCAATGAAGTC	-9420470	True	NA	NA	False	ATTAAA	-21	NA	9423544	9406660	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9414177_9414257_9423372
transcript_112519.known	chr2	-	861	6	FSM	ENSG00000119185.13	ENST00000464228.5	861	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	117.505063720675	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAACTCTCAATGAAGTCA	-9420426	True	NA	NA	False	ATTAAA	-22	NA	9423500	9406659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9418625_9418733_9423372
transcript_11252.known	chr1	+	1294	5	FSM	ENSG00000122481.17	ENST00000495272.5	1294	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	71.9461604256961	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGATTTGTTTTCATG	95231921	True	NA	-2	True	ATTAAA	-10	NA	95234220	95247217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_95234316_95239776_95239910_95244210_95244699_95246541_95246658_95246755
transcript_112522.known	chr2	-	1772	6	FSM	ENSG00000119185.13	ENST00000238091.8	1772	6	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	103.148436730762	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGTCCATTTAAAAGTAT	-9420432	True	NA	-18	True	AATAAA	-2	NA	9423506	9405683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_9406906_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9423372
transcript_112523.known	chr2	-	2126	6	FSM	ENSG00000119185.13	ENST00000359712.7	2126	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	124.911808889312	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAACTCTCAATGAAGTC	-9423208	False	3074	NA	False	ATTAAA	-21	NA	9423250	9406660	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_9407599_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9422478
transcript_112525.known	chr2	-	1043	6	FSM	ENSG00000119185.13	ENST00000456913.6	1043	6	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_5	43.1925919574179	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGTGTGGTCGGCTTGCT	-9420356	True	NA	NA	False	NA	NA	NA	9423430	9407029	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_9407599_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9423372
transcript_112527.known	chr2	-	1027	5	FSM	ENSG00000119185.13	ENST00000490426.5	1027	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_4	121.826464694663	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAGACTAGATGTCACAG	-9420388	True	NA	NA	False	NA	NA	NA	9423462	9406348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9423372
transcript_112533.known	chr2	-	560	4	FSM	ENSG00000119185.13	ENST00000497031.5	560	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	146.679544889152	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTCATCTATTTTCTGG	-9420370	True	NA	NA	False	ATTAAA	-34	NA	9423444	9406647	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_9406906_9408112_9408206_9412268_9412406_9423372
transcript_112538.known	chr2	+	2259	18	FSM	ENSG00000119203.14	ENST00000238112.8	2259	18	0	0	0	0	multi-exon	FALSE	canonical	3	819	junction_4	78.9118907718622	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTTACTTTTAATGTC	9413670	True	NA	22	True	AATAAA	-23	NA	9423653	9473101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_9423824_9428764_9428829_9429922_9430021_9430751_9430881_9432510_9432689_9433870_9433961_9436210_9436362_9440490_9440667_9441817_9441977_9443514_9443662_9448197_9448351_9452912_9453022_9455658_9455758_9456932_9457028_9459530_9459619_9467706_9467777_9471342_9471440_9472915
transcript_11255.nic	chr1	+	1136	4	NIC	ENSG00000122481.17	novel	796	5	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	84.5747532594029	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTTTTCATGTTTGCT	95231905	True	NA	4	True	ATTAAA	-16	NA	95234204	95247223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_95234316_95244210_95244652_95246541_95246658_95246755
transcript_112551.nic	chr2	+	2006	15	ISM	ENSG00000119203.14	ENST00000238112.8	2259	18	-101	13484	-98	11267	5prime_fragment	TRUE	canonical	3	819	junction_4	73.6792552423084	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAGAGTTCATTTTTATC	9423536	False	NA	20	True	AAGAAA	-2	NA	9423552	9459617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_9423824_9428764_9428829_9429922_9430021_9430751_9430881_9432510_9432689_9433870_9433961_9436210_9436362_9440490_9440667_9441817_9441977_9443514_9443662_9448197_9448351_9452912_9453022_9455658_9455758_9456932_9457028_9459530
transcript_112556.known	chr2	-	4391	19	FSM	ENSG00000151694.14	ENST00000310823.8	4391	19	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_3	13.3592341023903	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGACCTAAGTATAAAACTT	-9552378	True	NA	-32	True	AATAAA	-17	NA	9555830	9488485	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_9490519_9491100_9491152_9492897_9492987_9493746_9493826_9494636_9494768_9497113_9497249_9502172_9502277_9505165_9505366_9509978_9510132_9517900_9517990_9518102_9518248_9521202_9521317_9523248_9523339_9526110_9526245_9527785_9527955_9535833_9535923_9536697_9536829_9543152_9543286_9555508
transcript_112558.known	chr2	+	863	6	FSM	ENSG00000134330.19	ENST00000482918.5	863	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	49.4489635887346	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTAGATGATTTTTCAGG	9473359	True	NA	-8	True	AATAAA	-2	NA	9473817	9488444	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_9473900_9475986_9476040_9478221_9478371_9481285_9481448_9484431_9484551_9488146
transcript_112559.known	chr2	+	2176	6	FSM	ENSG00000134330.19	ENST00000497473.6	2176	6	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	18.8997354478839	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAACTATTCCAGTTGT	9473120	True	NA	NA	False	NA	NA	NA	9474550	9489742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_9474648_9475986_9476040_9478221_9478371_9481285_9481448_9484431_9484551_9488146
transcript_11256.known	chr1	+	1180	4	FSM	ENSG00000122481.17	ENST00000370202.5	1180	4	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	54.1869192907497	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTCATGTTTGCTTT	95231910	True	NA	6	True	ATTAAA	-18	NA	95234209	95247225	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_95234316_95244210_95244699_95246541_95246658_95246755
transcript_112561.known	chr2	+	837	6	FSM	ENSG00000134330.19	ENST00000351760.11	837	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	52.1175594209859	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAGTTTTATACTTAGGT	9473147	False	NA	10	True	AATAAA	-20	NA	9474577	9488462	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_9474648_9475986_9476040_9478253_9478371_9481285_9481448_9484431_9484551_9488146
transcript_112562.nic	chr2	+	882	5	NIC	ENSG00000134330.19	novel	863	6	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	50.5142306681988	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAGTTTTATACTTAGGT	9473305	True	NA	10	True	AATAAA	-20	NA	9473763	9488462	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_9473900_9478221_9478371_9481285_9481448_9484431_9484551_9488146
transcript_112564.known	chr2	+	2137	5	FSM	ENSG00000134330.19	ENST00000470914.5	2137	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	53.5210239064986	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAACTATTCCAGTTGT	9473106	True	NA	NA	False	NA	NA	NA	9474536	9489742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_9474648_9478221_9478371_9481285_9481448_9484431_9484551_9488146
transcript_112566.known	chr2	+	877	1	FSM	ENSG00000271855.1	ENST00000607241.1	877	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGCTGTTTTATTTAG	9555805	True	NA	32	True	AATAAA	-22	NA	9555898	9556775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_9555900_9556800
transcript_112574.known	chr2	-	2196	6	FSM	ENSG00000134308.14	ENST00000238081.8	2196	6	0	0	0	0	multi-exon	FALSE	canonical	3	2340	junction_5	553.350015812777	1624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGATTGTGAGTGCCT	-9593653	True	NA	-17	True	AATAAA	-29	NA	9630997	9583966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_9585346_9587413_9587510_9588164_9588329_9591391_9591516_9630158_9630535_9630940
transcript_112587.known	chr2	-	2216	5	FSM	ENSG00000134308.14	ENST00000381844.8	2216	5	0	0	0	0	multi-exon	FALSE	canonical	3	3338	junction_3	242.155941492254	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAATTATGTGATTGTGAG	-9593272	False	NA	-22	True	AATAAA	-24	NA	9630616	9583971	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_9585346_9587413_9587510_9588164_9588329_9591391_9591516_9630158
transcript_112588.known	chr2	+	2267	15	FSM	ENSG00000115750.17	ENST00000263663.10	2267	15	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_11	9.27169271030299	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAAAGTCAATTTTTGCA	9840467	True	NA	29	True	TATAAA	-45	NA	9843473	9934416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_9843560_9845219_9845319_9849372_9849461_9851540_9851639_9854325_9854422_9868275_9868430_9875864_9876019_9882705_9882806_9904858_9905007_9910735_9910914_9911510_9911558_9913158_9913250_9919040_9919112_9919597_9919821_9933782
transcript_112599.known	chr2	+	1592	14	FSM	ENSG00000115750.17	ENST00000434858.5	1592	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	27.1883633305081	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAATCAAGATCCAAG	9840518	True	NA	NA	False	AATACA	-10	NA	9843524	9933946	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_9843560_9845219_9845319_9849372_9849461_9851540_9851639_9854325_9854422_9868275_9868430_9882705_9882806_9904858_9905007_9910735_9910914_9911510_9911558_9913158_9913250_9919040_9919112_9919597_9919821_9933782
transcript_11260.nnic	chr1	+	784	3	NIC	ENSG00000122481.17	novel	796	5	NA	NA	-94	0	combination_of_known_splicesites	FALSE	canonical	3	128	junction_1	49	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTTTTCATGTTTGCT	NA	False	NA	4	True	ATTAAA	-16	NA	95234115	95247223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_95234316_95246541_95246658_95246755
transcript_112605.nic	chr2	+	1381	11	ISM	ENSG00000115750.17	ENST00000263663.10	2267	15	-134	22860	-103	-2153	5prime_fragment	FALSE	canonical	3	84	junction_1	9.75961064797157	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATTTTAATTTTTTATCA	NA	False	NA	NA	False	AATGAA	-13	NA	9843339	9911556	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_9843560_9845219_9845319_9849372_9849461_9851540_9851639_9854325_9854422_9868275_9868430_9875864_9876019_9882705_9882806_9904858_9905007_9910735_9910914_9911510
transcript_112608.nic	chr2	+	294	3	ISM	ENSG00000115750.17	ENST00000404869.7	505	5	-81	2701	-27	16	5prime_fragment	FALSE	canonical	3	84	junction_1	4.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTCAACCGGGGGCTTAA	9840409	True	NA	NA	False	AATAAA	-2	NA	9843415	9849423	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_9843560_9845219_9845319_9849372
transcript_112609.known	chr2	+	273	3	FSM	ENSG00000115750.17	ENST00000625239.2	273	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	41.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGAGAGCCTATTGATAG	9840436	True	NA	NA	False	NA	NA	NA	9843442	9846113	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_9843560_9845219_9845319_9846056
transcript_11261.nnic	chr1	+	1062	3	NIC	ENSG00000122481.17	novel	1180	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_2	61	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTTTTCATGTTTGCT	95231910	True	NA	4	True	ATTAAA	-16	NA	95234209	95247223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_95234316_95244210_95244699_95246755
transcript_112610.known	chr2	+	3568	16	FSM	ENSG00000134317.18	ENST00000324907.14	3568	16	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_10	6.96531087285812	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCATTTCCTGTTTTTC	9951464	True	NA	11	True	ATTAAA	-22	NA	9951692	10002277	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_9951854_9954914_9955102_9958785_9958857_9961045_9961437_9962454_9962532_9963885_9964043_9964234_9964347_9965286_9965382_9986123_9986283_9990695_9990748_9992006_9992147_9993206_9993245_9995878_9995971_9996315_9996402_9998964_9999030_10000592
transcript_11262.known	chr1	+	1078	3	FSM	ENSG00000122481.17	ENST00000263893.10	1078	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	64	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTTTTCATGTTTGCT	95231911	True	NA	4	True	ATTAAA	-16	NA	95234210	95247223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_95234316_95244210_95244716_95246755
transcript_112621.known	chr2	-	1572	1	FSM	ENSG00000260077.1	ENST00000567540.1	1572	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGGGTCTGGCTTCTTT	-10040636	False	NA	1	True	AATACA	-24	NA	10040663	10039091	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_10039100_10040700
transcript_112622.known	chr2	+	4035	4	FSM	ENSG00000172059.11	ENST00000305883.6	4035	4	0	0	0	0	multi-exon	TRUE	canonical	3	56	junction_1	3.29983164553722	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGTGTCCTGTGTCATT	10043001	True	NA	7	True	TATAAA	-17	NA	10043549	10054836	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_10043759_10046149_10046420_10047649_10048596_10052226
transcript_112624.known	chr2	+	4033	4	FSM	ENSG00000172059.11	ENST00000535335.1	4033	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	27.7248384425711	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGTGTCCTGTGTCATT	10043696	False	NA	7	True	TATAAA	-17	NA	10044244	10054836	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_10044452_10046149_10046420_10047649_10048596_10052226
transcript_112626.known	chr2	-	2738	3	FSM	ENSG00000205795.5	ENST00000381813.5	3045	3	0	307	0	-307	multi-exon	FALSE	canonical	2	5	junction_2	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGAGCCGGCCCTGTCTCT	NA	False	NA	NA	False	AATAAA	-30	NA	10080411	10056779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_10058959_10065903_10065957_10079905
transcript_112633.known	chr2	+	3431	11	FSM	ENSG00000171848.16	ENST00000641198.1	3431	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	288.33896718966	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGATTGGTAAAATTTGCA	10120681	False	NA	24	True	AATAAA	-20	NA	10120697	10131418	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_10120883_10122754_10122898_10122982_10123058_10123386_10123531_10123735_10123853_10124716_10124851_10126874_10126970_10127086_10127221_10128847_10128953_10129040_10129155_10129233
transcript_112636.known	chr2	+	3258	10	FSM	ENSG00000171848.16	ENST00000304567.10	3258	10	0	0	0	0	multi-exon	FALSE	canonical	3	905	junction_2	40.7679370505551	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTTGATTGGTAAAATT	10099533	True	NA	20	True	AATAAA	-16	NA	10122738	10131414	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_10122898_10122982_10123058_10123386_10123531_10123735_10123853_10124716_10124851_10126874_10126970_10127086_10127221_10128847_10128953_10129040_10129155_10129233
transcript_11264.known	chr1	+	513	2	FSM	ENSG00000122481.17	ENST00000473397.1	513	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATTTGTTTTCATGTTT	95231968	False	NA	1	True	ATTAAA	-13	NA	95234267	95247220	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_95234316_95246755
transcript_112644.known	chr2	+	332	1	FSM	ENSG00000171848.16	ENST00000607140.1	332	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGATGCTTTAGTGTGTT	10120717	False	NA	2	True	AATAAA	-18	NA	10120733	10121065	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_10120700_10121100
transcript_112648.known	chr2	+	1749	5	FSM	ENSG00000115756.13	ENST00000307845.8	1749	5	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_4	6.57647321898295	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATTTTCTGAGTTTTGC	10301647	True	NA	13	True	AATAAA	-1	NA	10302903	10427604	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_10303178_10396834_10396921_10419733_10420136_10422982_10423089_10426723
transcript_11265.known	chr1	-	747	1	FSM	ENSG00000137970.7	ENST00000468715.1	747	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTACCATGATTATTT	-96679207	True	NA	NA	False	AATGAA	-5	NA	96679620	96678873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_96678900_96679600
transcript_112653.known	chr2	-	2476	12	FSM	ENSG00000115758.13	ENST00000234111.9	2476	12	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_7	43.4537847023556	509	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTTGTGTATCTTCACC	-10438501	True	NA	NA	False	AATAAA	-22	NA	10448327	10439967	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_10440869_10441508_10441724_10441816_10441930_10442011_10442175_10443229_10443314_10443489_10443572_10443701_10443837_10444094_10444268_10444473_10444648_10444930_10445050_10445154_10445265_10448120
transcript_112659.known	chr2	+	4242	4	FSM	ENSG00000257135.8	ENST00000553181.6	4242	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTATCAAACAAAAATATTC	10448551	True	NA	NA	False	AATAAA	-12	NA	10448688	10457692	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_10450282_10452280_10452470_10453868_10454059_10455422
transcript_11266.known	chr1	+	3057	14	FSM	ENSG00000117569.19	ENST00000370197.5	3057	14	0	0	0	0	multi-exon	TRUE	canonical	3	42	junction_8	48.4564099850479	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGAGGTTTGATGGTTG	96717292	True	NA	13	True	ATTAAA	-19	NA	96721809	96814793	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_96721873_96723563_96723595_96751424_96751501_96769702_96769876_96770707_96770852_96777584_96777750_96777835_96777947_96785058_96785255_96804784_96804940_96806418_96806453_96806865_96806959_96812711_96812929_96813028_96813107_96813272
transcript_112660.known	chr2	+	2457	4	FSM	ENSG00000257135.8	ENST00000667698.1	2457	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTAAAAATAGGCAGTCA	10450043	False	NA	NA	False	AATACA	-25	NA	10450180	10457543	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_10450282_10452280_10452470_10454012_10454059_10455422
transcript_112667.known	chr2	-	3498	21	FSM	ENSG00000115761.16	ENST00000381685.10	3498	21	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_3	29.5030083211865	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGACTCCAAGAAAATTT	-10683079	True	NA	NA	False	AATAAA	-29	NA	10689975	10570753	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_10572191_10577635_10577739_10589042_10589291_10589577_10589752_10600852_10600943_10602775_10602875_10603077_10603158_10607184_10607312_10644319_10644373_10654480_10654548_10657741_10657892_10659171_10659251_10662958_10663045_10667217_10667279_10668657_10668724_10671553_10671691_10673519_10673558_10675793_10675872_10681970_10682070_10684566_10684613_10689795
transcript_11267.known	chr1	+	3054	14	FSM	ENSG00000117569.19	ENST00000370198.5	3054	14	0	0	0	0	multi-exon	TRUE	canonical	3	42	junction_8	45.709010156286	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGAGGTTTGATGGTTG	96717292	True	NA	13	True	ATTAAA	-19	NA	96721809	96814793	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_96721873_96723563_96723595_96751424_96751501_96769702_96769876_96770707_96770852_96777584_96777750_96777835_96777947_96785058_96785255_96804784_96804940_96806418_96806453_96806865_96806959_96812711_96812929_96813028_96813107_96813275
transcript_112670.known	chr2	-	3418	20	FSM	ENSG00000115761.16	ENST00000538384.5	3418	20	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_17	64.9824608768139	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGCTTCTTTGAGAAAGA	-10683091	True	NA	NA	False	AATAAA	-15	NA	10689987	10570767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_10572191_10577635_10577739_10589042_10589291_10589577_10589752_10600852_10600943_10602775_10602875_10603077_10603158_10607184_10607312_10644319_10644373_10654480_10654548_10657741_10657892_10659171_10659251_10662958_10663045_10667217_10667279_10668657_10668724_10671553_10671691_10673519_10673558_10681970_10682070_10684566_10684613_10689795
transcript_11268.known	chr1	+	3888	14	FSM	ENSG00000117569.19	ENST00000676292.1	3888	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	60.9225912956558	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCCCACACTTATGCAAAA	96721976	True	NA	NA	False	TATAAA	-2	NA	96722029	96815612	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_96722108_96723563_96723595_96751424_96751501_96769702_96769876_96770707_96770852_96777584_96777750_96777835_96777947_96785058_96785255_96804784_96804940_96806418_96806453_96806865_96806959_96812711_96812929_96813028_96813107_96813275
transcript_112681.nic	chr2	-	2563	5	NIC	ENSG00000115761.16	novel	3333	20	NA	NA	-2	1922	intron_retention	FALSE	canonical	3	248	junction_1	22.8637267303474	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAGGATAGGCAAAAAATT	-10683081	True	NA	NA	False	AAAAAG	-45	NA	10689977	10671399	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_10673558_10675793_10675872_10681970_10682070_10684566_10684613_10689795
transcript_112687.known	chr2	-	2509	14	FSM	ENSG00000143870.13	ENST00000540494.5	2509	14	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_13	2887.87812606521	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTTGTGAGCAATTTCT	-10739361	True	NA	-23	True	AATAAA	-14	NA	10812839	10783392	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_10784327_10784933_10785031_10787280_10787440_10788696_10788770_10788896_10788982_10789748_10789890_10790718_10790834_10791794_10791926_10793095_10793203_10797080_10797208_10797699_10797758_10802498_10802641_10810242_10810421_10812677
transcript_11269.known	chr1	+	1691	13	FSM	ENSG00000117569.19	ENST00000476419.5	1691	13	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_9	51.7420820566351	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGATTTTTTTTGTTTTTG	96717304	True	NA	NA	False	NA	NA	NA	96721821	96813488	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_96721873_96723563_96723595_96751424_96751501_96769702_96769876_96770707_96770852_96777584_96777750_96777835_96777947_96785058_96785255_96804799_96804940_96806865_96806959_96812711_96812929_96813028_96813107_96813272
transcript_112691.known	chr2	+	3102	13	FSM	ENSG00000143882.12	ENST00000381661.3	3102	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.69129254365919	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTGCCTACTTTGTTTA	10721546	True	NA	NA	False	AATAAA	-16	NA	10721648	10785110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_10721732_10722823_10722979_10726501_10726570_10753980_10754067_10764330_10764426_10768718_10768811_10771838_10771938_10772541_10772611_10774787_10774881_10774977_10775072_10778571_10778670_10782242_10782376_10783173
transcript_112700.known	chr2	-	2279	13	FSM	ENSG00000143870.13	ENST00000272227.8	2279	13	0	0	0	0	multi-exon	FALSE	canonical	3	7263	junction_3	518.508832829511	1953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTGAGCAATTTCTCT	-10739307	True	NA	-21	True	AATAAA	-16	NA	10812785	10783390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_10784327_10784933_10785031_10787280_10787440_10788696_10788770_10788896_10788982_10789748_10789890_10790718_10790834_10791794_10791926_10793095_10793203_10797080_10797208_10797699_10797758_10802498_10802641_10812677
transcript_11272.known	chr1	+	1129	5	FSM	ENSG00000117569.19	ENST00000460706.5	1129	5	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	16.768646337734	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAATGGAAAACTGTTCC	96717274	True	NA	NA	False	AATAAA	-2	NA	96721791	96771475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_96721873_96723563_96723595_96751424_96751501_96769702_96769876_96770707
transcript_112722.nic	chr2	-	1146	10	ISM	ENSG00000143870.13	ENST00000272227.8	2279	13	-66	5313	-12	-4843	5prime_fragment	FALSE	canonical	3	7394	junction_3	494.694019409479	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGGGGTAAGTTACTGAG	NA	False	NA	20	True	AATACA	-10	NA	10812851	10788703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_10788770_10788896_10788982_10789748_10789890_10790718_10790834_10791794_10791926_10793095_10793203_10797080_10797208_10797699_10797758_10802498_10802641_10812677
transcript_11273.known	chr1	+	1736	9	FSM	ENSG00000162627.17	ENST00000306121.8	1736	9	0	0	0	0	multi-exon	TRUE	canonical	3	254	junction_2	26.7055705799371	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTGGCTGCAGTGTATT	98659939	True	NA	8	True	AATAAA	-15	NA	98661720	98760500	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_98661912_98684884_98685068_98691074_98691186_98691534_98691700_98695517_98695717_98698705_98698906_98701816_98701904_98738236_98738390_98760053
transcript_112733.known	chr2	-	2534	14	FSM	ENSG00000143870.13	ENST00000381611.8	2534	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	2914.26696457761	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTTGTGAGCAATTTCT	NA	False	NA	-23	True	AATAAA	-14	NA	10832485	10783392	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_10784327_10784933_10785031_10787280_10787440_10788696_10788770_10788896_10788982_10789748_10789890_10790718_10790834_10791794_10791926_10793095_10793203_10797080_10797208_10797699_10797758_10802498_10802641_10819273_10819355_10832201
transcript_112736.known	chr2	+	928	8	FSM	ENSG00000162976.13	ENST00000445921.5	928	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	72.8417350654619	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGACTTGAAAGAAAGAGC	11153180	True	NA	NA	False	AGTAAA	-33	NA	11155430	11177957	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_11155690_11160465_11160549_11160624_11160695_11164203_11164262_11171924_11172046_11172750_11172825_11174967_11175010_11177736
transcript_112738.known	chr2	+	1717	7	FSM	ENSG00000162976.13	ENST00000295083.8	1717	7	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_5	33.4784341861377	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCTGAGTCTTAAAACT	11153216	True	NA	16	True	AATAAA	-16	NA	11155466	11178856	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_11155690_11160465_11160549_11160624_11160695_11164203_11164262_11171924_11172046_11174967_11175010_11177736
transcript_112741.known	chr2	+	1784	6	FSM	ENSG00000162976.13	ENST00000441908.6	1784	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	60.8013157752363	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTGTCAATCATTAATA	11153121	True	NA	30	True	AATAAA	-30	NA	11155371	11178870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_11155690_11160465_11160549_11160624_11160695_11164203_11164262_11171924_11172046_11177736
transcript_112742.known	chr2	+	696	6	FSM	ENSG00000162976.13	ENST00000402361.5	696	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	61.5031706499754	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGTTAGGTTATGGTAGT	11153284	True	NA	NA	False	TTTAAA	-28	NA	11155534	11178024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_11155690_11160465_11160549_11160624_11160695_11164203_11164262_11174967_11175010_11177736
transcript_112744.known	chr2	+	453	3	FSM	ENSG00000162976.13	ENST00000464700.5	453	3	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_2	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCCCAAATGCAAACGTGT	11153264	True	NA	NA	False	ACTAAA	-16	NA	11155514	11160819	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_11155690_11160465_11160549_11160624
transcript_112746.nic	chr2	-	3034	20	ISM	ENSG00000134318.15	ENST00000315872.11	8345	33	-25	28007	-25	7594	5prime_fragment	FALSE	canonical	1	29	junction_9	31.7490157327751	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAATGAACTTGGAAAAA	-11342093	True	NA	NA	False	AAGAAA	-19	NA	11344661	11207765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_11207911_11208286_11208448_11211680_11211841_11214356_11214464_11214839_11215087_11215320_11215413_11215509_11215646_11216157_11216207_11217089_11217170_11218454_11218467_11218965_11219027_11221197_11221358_11222082_11222175_11224321_11224461_11227253_11227399_11235701_11235963_11249660_11249799_11286538_11286640_11287654_11287737_11343995
transcript_11275.known	chr1	-	4139	6	FSM	ENSG00000117598.13	ENST00000370188.7	4139	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	7.78203058333749	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGACTTTGTAATATATT	-99005015	False	NA	2	True	AATAAA	-28	NA	99005032	98890244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_98893105_98914800_98914921_98921881_98922059_98953069_98953321_98956608_98956742_99004434
transcript_112754.known	chr2	-	2227	9	FSM	ENSG00000169016.17	ENST00000455198.5	2227	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	61.5293375147173	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAGTGAGTGGAGTGAG	-11465868	False	3311	NA	False	AATAAA	-10	NA	11465879	11445299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_11446524_11447626_11447775_11450011_11450127_11451650_11451807_11453581_11453799_11455341_11455475_11457178_11457234_11458280_11458352_11465771
transcript_112755.known	chr2	-	1253	8	FSM	ENSG00000169016.17	ENST00000437573.5	1253	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	60.6593028348345	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCATTTGAGAATTTATGT	-11462842	True	NA	NA	False	AAGAAA	-42	NA	11466153	11446476	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_11446524_11447626_11447775_11450011_11450127_11451650_11451807_11453581_11453799_11455341_11455475_11457178_11457234_11465771
transcript_112756.known	chr2	-	3296	8	FSM	ENSG00000169016.17	ENST00000444832.5	3296	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	65.0691939399898	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGGCGTTGGGTCTCT	-11462845	True	NA	0	True	TATAAA	-25	NA	11466156	11444374	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_11446524_11447626_11447775_11450011_11450127_11451650_11451807_11453581_11453799_11457178_11457234_11458280_11458352_11465771
transcript_112757.known	chr2	-	3230	7	FSM	ENSG00000169016.17	ENST00000381525.8	3230	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	52.035244466291	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGGCGTTGGGTCTCT	-11462850	True	NA	0	True	TATAAA	-25	NA	11466161	11444374	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_11446524_11447626_11447775_11450011_11450127_11451650_11451807_11453581_11453799_11457178_11457234_11465771
transcript_112758.known	chr2	-	3191	6	FSM	ENSG00000169016.17	ENST00000546212.2	3191	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	66.8538704937867	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGGCGTTGGGTCTCT	-11462866	True	NA	0	True	TATAAA	-25	NA	11466177	11444374	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_11446524_11447626_11447775_11450011_11450127_11451650_11451807_11453581_11453799_11465771
transcript_11276.known	chr1	-	3983	6	FSM	ENSG00000117598.13	ENST00000263177.5	3983	6	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	6.70522184569608	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGACTTTGTAATATATT	-99004438	True	NA	2	True	AATAAA	-28	NA	99004861	98890244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_98893105_98914785_98914921_98921881_98922059_98953069_98953321_98956608_98956742_99004434
transcript_112765.nnic	chr2	+	1638	7	NNC	ENSG00000196208.14	novel	8444	32	NA	NA	480	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	4.29793231940921	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAGAATTCTGCTCCAAG	11480503	True	NA	4	True	AATAAA	-17	NA	11482820	11581265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_11482964_11556453_11556772_11562462_11562583_11566479_11566657_11576352_11576536_11578296_11578432_11580703
transcript_112772.known	chr2	+	5448	21	FSM	ENSG00000134324.12	ENST00000674199.1	5448	21	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	13.494813818649	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGTGTGTGAATTTTAAA	11745843	True	NA	19	True	AATAAA	-29	NA	11746631	11827409	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_11746672_11765532_11765734_11767762_11767859_11771371_11771680_11773619_11773746_11776085_11776194_11779518_11779646_11782200_11782508_11783828_11783923_11784885_11785077_11787073_11787168_11788386_11788457_11791913_11792007_11795407_11795488_11802906_11803034_11804422_11804572_11805069_11805157_11815087_11815241_11819483_11819599_11820410_11820515_11824631
transcript_112773.known	chr2	+	5384	20	FSM	ENSG00000134324.12	ENST00000256720.6	5384	20	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	7.49958447602395	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGTGTGTGAATTTTAAA	11745799	True	NA	19	True	AATAAA	-29	NA	11746587	11827409	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_11746672_11765532_11765734_11767762_11767859_11771371_11771680_11773619_11773746_11779518_11779646_11782200_11782508_11783828_11783923_11784885_11785077_11787073_11787168_11788386_11788457_11791913_11792007_11795407_11795488_11802906_11803034_11804422_11804572_11805069_11805157_11815087_11815241_11819483_11819599_11820410_11820515_11824631
transcript_112777.known	chr2	-	1796	2	FSM	ENSG00000286427.1	ENST00000657078.1	1796	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCCAAGATGGTTAAGATA	-12716498	False	NA	NA	False	AATAAA	-42	NA	12716557	12702763	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_12704366_12716363
transcript_112780.nnic	chr2	+	3836	6	NNC	ENSG00000071575.12	novel	4344	3	NA	NA	-51	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	181.258930814457	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGAGTCTGGAAAATGA	12716843	False	NA	77	True	AATAAA	-22	NA	12716858	12742734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_12717011_12717251_12717686_12717836_12718129_12718321_12718578_12723259_12723553_12740325
transcript_112789.nnic	chr2	+	2577	5	NNC	ENSG00000071575.12	novel	4344	3	NA	NA	-51	-1452	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	195.418781083088	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGGTGCACACAGACTGAC	12716843	False	NA	NA	False	NA	NA	NA	12716858	12741282	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_12717011_12717251_12717686_12717836_12718578_12723259_12723553_12740325
transcript_11279.known	chr1	+	4824	7	FSM	ENSG00000117600.14	ENST00000370185.9	4824	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	4.29793231940921	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAATAGTTTGGTTTTTA	99264191	True	NA	8	True	AATAAA	-22	NA	99264491	99309584	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_99264672_99287964_99288151_99296737_99296868_99299034_99299231_99300908_99300967_99301723_99301898_99305684
transcript_112790.nnic	chr2	+	4029	5	NNC	ENSG00000071575.12	novel	4344	3	NA	NA	-51	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	195.418781083088	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGAGTCTGGAAAATGA	12716843	False	NA	77	True	AATAAA	-22	NA	12716858	12742734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_12717011_12717251_12717686_12717836_12718578_12723259_12723553_12740325
transcript_112796.nnic	chr2	+	2535	5	NNC	ENSG00000071575.12	novel	4344	3	NA	NA	-51	-1452	at_least_one_novel_splicesite	FALSE	canonical	3	167	junction_2	139.474684082811	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGGTGCACACAGACTGAC	12716843	False	NA	NA	False	NA	NA	NA	12716858	12741282	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_12717011_12717251_12718129_12718321_12718578_12723259_12723553_12740325
transcript_112797.nnic	chr2	+	3987	5	NNC	ENSG00000071575.12	novel	4344	3	NA	NA	-51	0	at_least_one_novel_splicesite	FALSE	canonical	3	167	junction_2	139.474684082811	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGAGTCTGGAAAATGA	12716843	False	NA	77	True	AATAAA	-22	NA	12716858	12742734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_12717011_12717251_12718129_12718321_12718578_12723259_12723553_12740325
transcript_112807.nic	chr2	+	2728	4	NIC	ENSG00000071575.12	novel	4344	3	NA	NA	-51	-1452	combination_of_known_junctions	FALSE	canonical	3	215	junction_1	119.622554543679	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGGTGCACACAGACTGAC	12716843	False	NA	NA	False	NA	NA	NA	12716858	12741282	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_12717011_12717251_12718578_12723259_12723553_12740325
transcript_112808.nic	chr2	+	4180	4	NIC	ENSG00000071575.12	novel	4344	3	NA	NA	-51	0	combination_of_known_junctions	FALSE	canonical	3	215	junction_1	119.622554543679	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGAGTCTGGAAAATGA	12716843	False	NA	77	True	AATAAA	-22	NA	12716858	12742734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_12717011_12717251_12718578_12723259_12723553_12740325
transcript_11281.known	chr1	+	7091	34	FSM	ENSG00000162688.17	ENST00000361915.8	7091	34	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_6	21.4292780503547	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTTGCTTTCATTCAT	99850297	True	NA	11	True	AATAAA	-18	NA	99850360	99924020	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_99850416_99850974_99851125_99861502_99861714_99862256_99862424_99864385_99864590_99870399_99870582_99870757_99870870_99874686_99874811_99875153_99875257_99875357_99875456_99876457_99876598_99877640_99877829_99879922_99880047_99880631_99880796_99881075_99881178_99881291_99881448_99881540_99881692_99884119_99884245_99884338_99884452_99884568_99884704_99887977_99888109_99891219_99891357_99891605_99891740_99892431_99892608_99896285_99896389_99900635_99900862_99902682_99902795_99910711_99910848_99912404_99912518_99913526_99913739_99915388_99915487_99916409_99916498_99916597_99916732_99921533
transcript_112818.known	chr2	+	830	3	FSM	ENSG00000071575.12	ENST00000405331.3	830	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	235.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTCATTTAGAAGATGA	12718126	True	NA	22	True	AATAAA	-23	NA	12718237	12724825	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_12718578_12723259_12723553_12724628
transcript_112819.known	chr2	+	4344	3	FSM	ENSG00000071575.12	ENST00000155926.9	4344	3	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_2	19.5	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGAGTCTGGAAAATGA	12711155	True	NA	77	True	AATAAA	-22	NA	12716935	12742734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_12718578_12723259_12723553_12740325
transcript_112821.known	chr2	+	2778	3	FSM	ENSG00000071575.12	ENST00000381465.2	2778	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	209.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGAGTCTGGAAAATGA	12711154	True	NA	77	True	AATAAA	-22	NA	12716934	12742734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_12717011_12723259_12723553_12740325
transcript_112826.known	chr2	+	3765	3	FSM	ENSG00000162981.14	ENST00000331243.4	3765	3	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGGACTCCTTCTTGA	14632511	True	NA	10	True	ATTAAA	-21	NA	14632699	14637227	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_14632938_14633585_14633829_14633943
transcript_112829.known	chr2	+	6319	2	FSM	ENSG00000162981.14	ENST00000295092.3	6319	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAATGTTCTCTTGTCATT	14632528	True	NA	NA	False	AATAAA	-18	NA	14632716	14640041	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_14632938_14633943
transcript_11283.nic	chr1	+	4335	29	ISM	ENSG00000162688.17	ENST00000361915.8	7091	34	-301	11541	-301	-11541	5prime_fragment	TRUE	canonical	3	54	junction_6	22.3566579134992	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCCCTTATCATGAAG	99850048	False	NA	NA	False	AGTAAA	-39	NA	99850059	99912479	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_99850416_99850974_99851125_99861502_99861714_99862256_99862424_99864385_99864590_99870399_99870582_99870757_99870870_99874686_99874811_99875153_99875257_99875357_99875456_99876457_99876598_99877640_99877829_99879922_99880047_99880631_99880796_99881075_99881178_99881291_99881448_99881540_99881692_99884119_99884245_99884338_99884452_99884568_99884704_99887977_99888109_99891219_99891357_99891605_99891740_99892431_99892608_99896285_99896389_99900635_99900862_99902682_99902795_99910711_99910848_99912404
transcript_112833.known	chr2	-	7278	52	FSM	ENSG00000151779.13	ENST00000281513.10	7278	52	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_32	25.8502177214738	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCAAGCTGCCGCTTTTT	-15559478	True	NA	-21	True	AATAAA	-16	NA	15561334	15166915	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_15167324_15178987_15179117_15186741_15186881_15190263_15190404_15218772_15218969_15232421_15232512_15234544_15234748_15238467_15238687_15275483_15275819_15276850_15277102_15287072_15287184_15292536_15292767_15308215_15308354_15309170_15309248_15327749_15327871_15328198_15328313_15330597_15330766_15351991_15352082_15353552_15353711_15356302_15356417_15366579_15366694_15374607_15374721_15379601_15379832_15383214_15383318_15394226_15394350_15396412_15396476_15402167_15402302_15415545_15415720_15417526_15417713_15424314_15424469_15427710_15427795_15461200_15461338_15461686_15461792_15467328_15467408_15467663_15467805_15468381_15468534_15473221_15473348_15474066_15474325_15475686_15475881_15478225_15478290_15488893_15489023_15504144_15504214_15511211_15511351_15534542_15534642_15536417_15536552_15539222_15539357_15551492_15551537_15553425_15553474_15554060_15554139_15556782_15556820_15558579_15558635_15561187
transcript_112839.known	chr2	+	2451	26	FSM	ENSG00000079785.16	ENST00000678137.1	2451	26	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_18	287.15109890091	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGAAGGTTTGTGTC	15572090	True	NA	6	True	AATAAA	-14	NA	15591867	15631101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_15591950_15595144_15595197_15595489_15595554_15596733_15596764_15597374_15597472_15599668_15599717_15602547_15602632_15603191_15603276_15603813_15603891_15604436_15604510_15605949_15606027_15606149_15606265_15607174_15607314_15613223_15613285_15617243_15617343_15618180_15618271_15620207_15620397_15621064_15621117_15623468_15623583_15627053_15627146_15628444_15628518_15628637_15628711_15628796_15628840_15629601_15629698_15629989_15630111_15630775
transcript_112840.known	chr2	+	2384	24	FSM	ENSG00000079785.16	ENST00000617198.5	2384	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	303.175200615801	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGAAGGTTTGTGTC	15572074	True	NA	6	True	AATAAA	-14	NA	15591851	15631101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_15591950_15596733_15596764_15597374_15597472_15599668_15599717_15602547_15602632_15603191_15603276_15603813_15603891_15604436_15604510_15605949_15606027_15606149_15606265_15607174_15607314_15613223_15613285_15617243_15617343_15618180_15618271_15620207_15620397_15621064_15621117_15623435_15623583_15627053_15627146_15628444_15628518_15628637_15628711_15628796_15628840_15629601_15629698_15629989_15630111_15630775
transcript_112841.known	chr2	+	2423	25	FSM	ENSG00000079785.16	ENST00000677437.1	2423	25	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_13	297.418884833421	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGAAGGTTTGTGTC	15572090	True	NA	6	True	AATAAA	-14	NA	15591867	15631101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_15591950_15595144_15595197_15595489_15595554_15596733_15596764_15597374_15597472_15599668_15599717_15602547_15602632_15603191_15603276_15603813_15603891_15604436_15604510_15605949_15606027_15606149_15606265_15607174_15607314_15617243_15617343_15618180_15618271_15620207_15620397_15621064_15621117_15623435_15623583_15627053_15627146_15628444_15628518_15628637_15628711_15628796_15628840_15629601_15629698_15629989_15630111_15630775
transcript_112843.known	chr2	+	2613	3	FSM	ENSG00000134323.12	ENST00000281043.4	2613	3	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	154	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGCAACTCAACCTTTTC	15938881	True	NA	16	True	AATAAA	-16	NA	15940549	15947004	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_15940744_15941947_15942855_15945492
transcript_112844.known	chr2	-	770	3	FSM	ENSG00000233718.9	ENST00000419083.6	776	3	6	0	6	0	multi-exon	FALSE	canonical	3	11	junction_2	6	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGGTGGCGCCGCGGTGGT	NA	False	NA	NA	False	AATAAA	-23	NA	15941723	15939897	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_15940352_15940973_15941098_15941531
transcript_112846.known	chr2	-	496	2	FSM	ENSG00000233718.9	ENST00000641387.2	794	2	71	227	10	64	multi-exon	FALSE	canonical	3	23	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCGTGTTGTGCAGCTG	-15941022	False	216	NA	False	NA	NA	NA	15941238	15940120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_15940352_15940973
transcript_112847.known	chr2	+	1693	2	FSM	ENSG00000134323.12	ENST00000638417.1	1693	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAACTCAACCTTTTCCTT	15938897	False	NA	19	True	AATAAA	-19	NA	15940565	15947007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_15940744_15945492
transcript_112848.known	chr2	-	642	4	FSM	ENSG00000236989.5	ENST00000412381.5	642	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	4.49691252107735	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCAGAATCTTGCAATTG	-16105683	True	NA	NA	False	NA	NA	NA	16105841	16085221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_16085484_16097358_16097463_16105414_16105544_16105694
transcript_112857.known	chr2	-	4670	12	FSM	ENSG00000197872.11	ENST00000381323.7	4670	12	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_8	11.0849462361281	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACCTCTATTTTATATGA	-16665068	True	NA	-3	True	ATTAAA	-23	NA	16665834	16549458	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_16553000_16555068_16555140_16559459_16559587_16560989_16561070_16561160_16561278_16561455_16561534_16562004_16562142_16563988_16564095_16565645_16565768_16588049_16588130_16623863_16624020_16665779
transcript_11286.nic	chr1	+	1041	5	ISM	ENSG00000162688.17	ENST00000361915.8	7091	34	-301	59478	-301	-12055	5prime_fragment	FALSE	canonical	3	121	junction_1	13.5646599662505	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATGGAATGTTATTTGTA	99850048	False	NA	-5	True	ATTAAA	-4	NA	99850059	99864542	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_99850416_99850974_99851125_99861502_99861714_99862256_99862424_99864385
transcript_112863.known	chr2	+	2428	4	FSM	ENSG00000163032.12	ENST00000295156.9	2428	4	0	0	0	0	multi-exon	FALSE	canonical	3	699	junction_1	56.3973994672331	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCTATTCATTCATTTA	17533872	True	NA	NA	False	ACTAAA	-12	NA	17540695	17657018	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_17540919_17592069_17592237_17649409_17649626_17655196
transcript_112866.known	chr2	-	5240	28	FSM	ENSG00000163029.16	ENST00000448223.7	5240	28	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_26	66.8155949695769	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGTCATGCTTTTGTGA	-17747576	True	NA	1	True	AATAAA	-19	NA	17753810	17663811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_17665614_17666419_17666518_17670422_17670576_17678858_17678965_17683637_17683764_17695151_17695298_17696288_17696427_17700207_17700379_17701828_17701910_17703156_17703293_17707218_17707380_17708638_17708754_17714860_17715066_17716085_17716265_17716740_17716906_17717087_17717177_17718076_17718224_17720939_17721039_17721141_17721262_17725256_17725359_17726388_17726470_17731077_17731140_17731740_17731878_17738220_17738327_17741611_17741730_17745826_17745952_17752977_17753065_17753625
transcript_112867.known	chr2	-	5173	27	FSM	ENSG00000163029.16	ENST00000351948.8	5173	27	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_26	38.8074635961851	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGTCATGCTTTTGTGA	-17747596	True	NA	1	True	AATAAA	-19	NA	17753830	17663811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_17665614_17666419_17666518_17670422_17670576_17678858_17678965_17683637_17683764_17695151_17695298_17696288_17696427_17700207_17700379_17701828_17701910_17703156_17703293_17707218_17707380_17708638_17708754_17714860_17715066_17716085_17716265_17716740_17716906_17717087_17717177_17718076_17718224_17720939_17721039_17721141_17721262_17725256_17725359_17726388_17726470_17731077_17731140_17731740_17731878_17738220_17738327_17741611_17741730_17745826_17745952_17753625
transcript_112875.nic	chr2	-	2599	21	ISM	ENSG00000163029.16	ENST00000448223.7	5240	28	-28	36496	-8	2849	5prime_fragment	FALSE	canonical	3	34	junction_19	65.4022935377652	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGAGCATCTTAAAAGTC	-17747604	True	NA	NA	False	AAAAAG	-5	NA	17753838	17700307	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_17700379_17701828_17701910_17703156_17703293_17707218_17707380_17708638_17708754_17714860_17715066_17716085_17716265_17716740_17716906_17717087_17717177_17718076_17718224_17720939_17721039_17721141_17721262_17725256_17725359_17726388_17726470_17731077_17731140_17731740_17731878_17738220_17738327_17741611_17741730_17745826_17745952_17752977_17753065_17753625
transcript_112883.nic	chr2	-	2447	19	ISM	ENSG00000163029.16	ENST00000448223.7	5240	28	-28	39345	-8	0	5prime_fragment	FALSE	canonical	3	34	junction_17	67.9820237677252	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTAAAAAAATAATAATAATA	-17747604	True	NA	NA	False	TATAAA	-10	NA	17753838	17703156	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_17703293_17707218_17707380_17708638_17708754_17714860_17715066_17716085_17716265_17716740_17716906_17717087_17717177_17718076_17718224_17720939_17721039_17721141_17721262_17725256_17725359_17726388_17726470_17731077_17731140_17731740_17731878_17738220_17738327_17741611_17741730_17745826_17745952_17752977_17753065_17753625
transcript_112896.known	chr2	-	2460	20	FSM	ENSG00000163029.16	ENST00000446852.5	2460	20	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_15	92.5373324379779	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTAAAAAAATAATAATAATA	-17747539	True	NA	NA	False	TATAAA	-10	NA	17753773	17703156	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_17703293_17707218_17707380_17708638_17708754_17714860_17715066_17716085_17716265_17716740_17716906_17717087_17717177_17718076_17718224_17720939_17721039_17721141_17721262_17725256_17725359_17726388_17726470_17731077_17731140_17731740_17731878_17738220_17738327_17740744_17740823_17741611_17741730_17745826_17745952_17752977_17753065_17753625
transcript_112898.known	chr2	+	9854	14	FSM	ENSG00000178295.15	ENST00000317402.11	9854	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	17.8172843413853	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAGATGCCAGATGCCAG	17753210	True	NA	NA	False	ATTAAA	-21	NA	17753857	17788941	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_17753968_17759928_17760105_17761395_17761583_17764896_17765074_17766578_17766690_17768737_17768812_17771195_17771288_17772633_17772785_17773095_17773133_17773218_17773300_17774270_17774402_17778001_17778064_17779977_17780122_17780620
transcript_112901.known	chr2	+	9957	14	FSM	ENSG00000178295.15	ENST00000381254.7	9957	14	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	13.1828290684709	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCCAGATGCCAGAAGCC	17753164	True	NA	NA	False	ATTAAA	-26	NA	17754137	17788946	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_17754346_17759928_17760105_17761395_17761583_17764896_17765074_17766578_17766690_17768737_17768812_17771195_17771288_17772633_17772785_17773095_17773133_17773218_17773300_17774270_17774402_17778001_17778064_17779977_17780122_17780620
transcript_112908.known	chr2	+	2341	3	FSM	ENSG00000170745.12	ENST00000304101.9	2341	3	0	0	0	0	multi-exon	TRUE	canonical	3	86	junction_2	7	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTCTTGGTTGTATGTT	17877190	True	NA	9	True	AATAAA	-20	NA	17878666	17932958	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_17878807_17917679_17917872_17930949
transcript_112913.nnic	chr2	+	1761	2	NNC	ENSG00000170745.12	novel	2341	3	NA	NA	-26	2	at_least_one_novel_splicesite	TRUE	canonical	3	53	junction_1	0	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAATGTCTTGGTTGTATG	17877164	True	NA	7	True	AATAAA	-18	NA	17878640	17932956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_17878807_17931361
transcript_112916.known	chr2	+	2397	3	FSM	ENSG00000170745.12	ENST00000403915.5	2397	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	43	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAATGTCTTGGTTGTA	17877830	True	NA	5	True	AATAAA	-16	NA	17877846	17932954	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_17878047_17917679_17917872_17930949
transcript_112917.known	chr2	-	1560	2	FSM	ENSG00000240857.2	ENST00000381249.4	1560	2	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_1	0	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCATTTCTTTGGAGGC	-18558778	True	NA	-6	True	AATAAA	-22	NA	18560653	18554722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_18555809_18560179
transcript_11292.known	chr1	+	2062	9	FSM	ENSG00000117620.15	ENST00000427993.7	2062	9	0	0	0	0	multi-exon	TRUE	canonical	2	11	junction_1	26.5282867897646	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCTTAATATTATTTTAA	99966992	True	NA	NA	False	NA	NA	NA	99969978	100023259	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_99970163_99974970_99975070_99993536_99993742_99999260_99999416_100007033_100007157_100011364_100011534_100015301_100015421_100017681_100017816_100022385
transcript_112920.known	chr2	-	1906	3	FSM	ENSG00000143867.7	ENST00000272223.3	1906	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAGGATGGGTAATTTCC	-19358583	True	NA	NA	False	AATAAA	-18	NA	19358623	19351484	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_19352411_19353140_19353838_19358340
transcript_112922.nnic	chr2	-	887	3	NNC	ENSG00000183891.6	novel	941	3	NA	NA	-58	0	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_2	38	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGTTAATATTGTGCC	-19901589	False	NA	-2	True	AATAAA	-18	NA	19901699	19896630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_19897127_19897868_19898036_19901475
transcript_112924.nnic	chr2	-	764	3	NNC	ENSG00000183891.6	novel	941	3	NA	NA	-58	-111	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_2	38	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATGTGTGGTATTTTCTT	-19901589	False	NA	-24	True	ATTAAA	-15	NA	19901699	19896753	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_19897127_19897868_19898036_19901475
transcript_112925.nnic	chr2	-	492	3	NNC	ENSG00000183891.6	novel	941	3	NA	NA	-58	0	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_2	38	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAGAAAAACAAAGAAGAAA	-19901589	False	NA	NA	False	AAAACA	-17	NA	19901699	19897025	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_19897127_19897868_19898036_19901475
transcript_112926.known	chr2	-	6898	27	FSM	ENSG00000118965.16	ENST00000281405.9	6898	27	0	0	0	0	multi-exon	TRUE	canonical	3	81	junction_6	16.3887679822594	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGTGTTTATTCCACG	-19987248	True	NA	-1	True	AATAAA	-16	NA	19990105	19910262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_19913709_19914036_19914278_19930395_19930553_19931268_19931410_19932282_19932448_19933400_19933512_19935470_19935604_19936218_19936366_19937742_19937947_19938264_19938402_19941758_19941840_19945785_19945997_19946460_19946571_19948163_19948218_19951414_19951485_19953833_19953979_19960553_19960615_19966723_19966910_19969479_19969606_19973562_19973709_19974467_19974634_19975529_19975664_19978750_19978880_19980690_19980784_19982462_19982535_19989164_19989283_19989991
transcript_112939.known	chr2	-	2557	8	FSM	ENSG00000132031.13	ENST00000407540.8	2557	8	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_4	9.66162195366338	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGAATTAACAGTTATTT	-20012074	True	NA	58	True	ATTAAA	-18	NA	20012668	19992051	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_19993167_19994298_19994410_19997133_19997260_20000440_20000567_20001954_20002081_20003160_20003287_20005743_20006311_20012408
transcript_112941.known	chr2	-	1443	7	FSM	ENSG00000132031.13	ENST00000421259.2	1443	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	39.0071218568553	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGCCAATGTTCCTGCT	-20012071	True	NA	NA	False	NA	NA	NA	20012665	19993036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_19993167_19994298_19994410_19997133_19997260_20000440_20000567_20001954_20002081_20005743_20006311_20012408
transcript_112945.known	chr2	-	1365	7	FSM	ENSG00000068697.7	ENST00000175091.5	1365	7	0	0	0	0	multi-exon	FALSE	canonical	3	3000	junction_3	260.065002558121	825	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTGTCATTGTTTTTAAT	-20025240	True	NA	-17	True	AATAAA	-17	NA	20051628	20032649	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_20033280_20034316_20034416_20034966_20035063_20037315_20037439_20037537_20037615_20040890_20041012_20051409
transcript_112953.known	chr2	-	3291	6	FSM	ENSG00000115884.11	ENST00000381150.5	3291	6	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_5	85.2830581065196	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGCTGCTGTGGTGGTGG	-20225305	False	NA	-10	True	AATAAA	-21	NA	20225433	20200798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_20202936_20203086_20203223_20203812_20204292_20205342_20205425_20224801_20225087_20225261
transcript_112958.known	chr2	-	3165	5	FSM	ENSG00000115884.11	ENST00000254351.9	3165	5	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_4	26.2011450131478	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTGCTGTGGTGGTGGTT	-20220943	True	NA	-8	True	AATAAA	-23	NA	20225130	20200796	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_20202936_20203086_20203223_20203812_20204292_20205342_20205425_20224801
transcript_11297.known	chr1	+	2454	8	FSM	ENSG00000117620.15	ENST00000370155.9	2454	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	29.1939328334795	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAAACCCCGTCTCTACC	99967070	True	NA	NA	False	NA	NA	NA	99970056	100023824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_99970163_99993536_99993746_99999260_99999416_100007033_100007157_100011364_100011534_100015301_100015421_100017681_100017816_100022385
transcript_112970.known	chr2	-	6309	21	FSM	ENSG00000055917.16	ENST00000361078.7	6309	21	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_20	151.933735555998	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTCTTGTGTTTTTCTC	-20347736	True	NA	-10	True	AATAAA	-1	NA	20350844	20248736	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_20251717_20253821_20254015_20254862_20254985_20255215_20255342_20256032_20256171_20258242_20258372_20260336_20260467_20263192_20263461_20278582_20278820_20282946_20283232_20283342_20283487_20290651_20290791_20294375_20294519_20297552_20297679_20307977_20308072_20308313_20308585_20311493_20311664_20312235_20312424_20318536_20318646_20327309_20327379_20350596
transcript_112984.known	chr2	+	2367	1	FSM	ENSG00000143878.10	ENST00000272233.6	2367	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAATGGCTCTTGTGGTTT	20446787	True	NA	100	True	ATTAAA	-22	NA	20447073	20449440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_20447100_20449400
transcript_112988.known	chr2	-	2383	7	FSM	ENSG00000118960.13	ENST00000304031.8	2383	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	6.64371047599825	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCTTGGATATAATTCT	-20649616	True	NA	-14	True	AATAAA	-19	NA	20651098	20617817	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_20619246_20623895_20624032_20624731_20624893_20638435_20638653_20640972_20641181_20645339_20645506_20651031
transcript_11299.known	chr1	+	1989	7	FSM	ENSG00000117620.15	ENST00000640715.1	1989	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	32.6190128606002	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCTGTAAAAACTTCTTTA	99967026	True	NA	4	True	ATTAAA	-18	NA	99970012	100023453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_99970163_99993536_99993742_99999260_99999416_100007033_100007157_100011364_100011534_100015301_100015421_100022385
transcript_112990.nic	chr2	-	2257	6	NIC	ENSG00000118960.13	novel	2383	7	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	15.8417170786503	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCTTGGATATAATTCT	-20649656	True	NA	-14	True	AATAAA	-19	NA	20651138	20617817	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_20619246_20623895_20624032_20624731_20624893_20638435_20638653_20640972_20641181_20651031
transcript_112991.known	chr2	-	7728	6	FSM	ENSG00000118960.13	ENST00000651498.1	7728	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	15.0146595032988	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGATTGGAAAAAGAAGGAAA	-20649648	True	NA	NA	False	AATAAA	-19	NA	20651130	20612296	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_20619246_20623895_20624032_20624731_20624893_20638435_20638653_20645339_20645506_20651031
transcript_112998.known	chr2	-	4358	4	FSM	ENSG00000118960.13	ENST00000402541.5	4358	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	5.73488351136175	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTCTCTGGAATGATTC	-20649596	True	NA	NA	False	TATAAA	-31	NA	20651078	20634715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_20638653_20640972_20641181_20645339_20645506_20651031
transcript_112999.known	chr2	-	1375	3	FSM	ENSG00000118960.13	ENST00000406618.3	1375	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	7	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAGAGAAGCAAAACTGG	-20649602	True	NA	NA	False	AATAAA	-25	NA	20651084	20640024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_20641181_20645339_20645506_20651031
transcript_113.known	SIRV3	+	2018	3	FSM	SIRV3A	SIRV303	2018	3	0	0	0	0	multi-exon	FALSE	canonical	3	2183	junction_1	515	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTAACAGGTTCTCAAC	NA	False	NA	NA	False	NA	NA	NA	1963	7822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV3_+_2006_4568_4780_6057
transcript_1130.known	chr1	+	486	3	FSM	ENSG00000197530.13	ENST00000463492.1	486	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	22.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATTTGGTTTCTATGGC	1614593	False	NA	17	True	AATAAA	-27	NA	1615967	1617323	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1616101_1616507_1616615_1617077
transcript_11301.known	chr1	+	2438	6	FSM	ENSG00000117620.15	ENST00000638336.1	2438	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	35.7289798343026	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAAAAAGCTACTG	99967019	True	NA	NA	False	NA	NA	NA	99970005	100024014	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_99970163_99993536_99993742_99999260_99999416_100007033_100007157_100011364_100011534_100022385
transcript_113011.known	chr2	-	3917	7	FSM	ENSG00000118961.15	ENST00000237822.8	3917	7	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_5	9.322910847298	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCTATCTCCTGCATCC	-20820492	True	NA	-17	True	TTTAAA	-7	NA	20823101	20684030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_20687095_20701569_20701653_20739970_20740206_20774809_20774980_20790254_20790399_20801309_20801466_20823036
transcript_113014.known	chr2	-	3807	6	FSM	ENSG00000118961.15	ENST00000541941.5	3807	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	39.1438373182804	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGTCTCATTGCTTCTT	-20820521	True	NA	0	True	TTTAAA	-24	NA	20823130	20684013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_20687095_20701569_20701653_20739970_20740206_20774809_20774980_20790254_20790399_20823036
transcript_113015.known	chr2	-	1179	6	FSM	ENSG00000118961.15	ENST00000626491.2	1179	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	35.0119979435621	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATTTTGGTAGGCAGGA	-20820492	True	NA	NA	False	NA	NA	NA	20823101	20686624	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_20687095_20701569_20701653_20739970_20740206_20774809_20774980_20801309_20801466_20823036
transcript_113016.known	chr2	-	3728	6	FSM	ENSG00000118961.15	ENST00000440866.6	3728	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	32.1185304769692	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGTCTCATTGCTTCTT	-20820521	True	NA	0	True	TTTAAA	-24	NA	20823130	20684013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_20687095_20701569_20701653_20774809_20774980_20790254_20790399_20801309_20801466_20823036
transcript_113017.known	chr2	-	3663	5	FSM	ENSG00000118961.15	ENST00000619656.4	3663	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	43.6427256252402	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGTCTCATTGCTTCTT	-20820521	True	NA	0	True	TTTAAA	-24	NA	20823130	20684013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_20687095_20701569_20701653_20739970_20740206_20774809_20774980_20823036
transcript_11302.known	chr1	+	1005	5	FSM	ENSG00000117620.15	ENST00000638876.1	1005	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	36.1005540123694	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAACTTTTGATTTTTACA	99967059	True	NA	NA	False	AATAAA	-22	NA	99970045	100015692	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_99970163_99993536_99993742_100007033_100007157_100011364_100011534_100015301
transcript_113022.nic	chr2	-	3899	25	ISM	ENSG00000119778.15	ENST00000238789.10	8112	28	-92	9378	-92	-3858	5prime_fragment	FALSE	canonical	3	37	junction_4	11.4527259006559	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAGTTAATAATTTAAAA	NA	False	NA	NA	False	AAGAAA	-2	NA	23927215	23758041	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_23758102_23762208_23762347_23765505_23765629_23782868_23783029_23786026_23786224_23788511_23788648_23798137_23798324_23810315_23810503_23819746_23819883_23823257_23823570_23828848_23828940_23833918_23834079_23857414_23857504_23863380_23863556_23864808_23864925_23867834_23867947_23869662_23869762_23875828_23875905_23880638_23880756_23884764_23884874_23885726_23885830_23887831_23887986_23888349_23888400_23895818_23895971_23926554
transcript_11303.known	chr1	-	3848	17	FSM	ENSG00000156876.10	ENST00000287482.6	3848	17	0	0	0	0	multi-exon	TRUE	canonical	3	62	junction_12	11.5427195668958	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTTTGAAAATCAAGTACT	-100131559	True	NA	-36	True	AATAAA	-18	NA	100132930	100083569	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_100085435_100085535_100085631_100088138_100088237_100102954_100103084_100105766_100105904_100106911_100106994_100107373_100107554_100107627_100107718_100107809_100108005_100110291_100110484_100119017_100119138_100120393_100120460_100121377_100121550_100122379_100122485_100123209_100123290_100125881_100125943_100132749
transcript_113033.known	chr2	+	1557	8	FSM	ENSG00000173960.14	ENST00000404924.5	1557	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	90.2407211579232	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGACAGCAGGGATTTAT	23926925	True	NA	NA	False	TATAAA	-39	NA	23927311	24000203	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_23927616_23939539_23939663_23958300_23958356_23971275_23971415_23976968_23977076_23982895_23983034_23984672_23984832_23999671
transcript_113043.known	chr2	+	6022	7	FSM	ENSG00000173960.14	ENST00000309033.5	6022	7	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_4	27.5962960477589	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTACCCTTGTTATAAAATA	23935283	True	NA	20	True	ATTAAA	-17	NA	23940462	24004909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_23940649_23958300_23958356_23971275_23971415_23976968_23977076_23982895_23983034_23984672_23984832_23999671
transcript_113059.known	chr2	+	2846	14	FSM	ENSG00000205639.12	ENST00000338315.6	2846	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.24034734589208	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTGTTCTATGCATTA	24010074	True	NA	NA	False	AATAAA	-17	NA	24010084	24026775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_24010193_24013284_24013411_24016155_24016281_24016844_24016969_24017285_24017365_24017457_24017589_24021647_24021739_24021848_24021971_24022432_24022517_24022821_24022903_24023129_24023240_24023582_24023727_24024094_24024272_24025431
transcript_11306.nnic	chr1	+	2936	13	NIC	ENSG00000156875.14	novel	2779	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	68	junction_2	213.681031758398	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGATCTGTGAGTTCCT	100033207	True	NA	31	True	AATAAA	-34	NA	100038094	100083377	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_100038317_100043072_100043230_100049908_100050005_100058665_100058729_100059877_100060006_100061834_100061950_100067976_100068196_100068472_100068587_100069613_100069686_100077164_100077278_100078450_100078549_100080495_100080660_100082002
transcript_113064.known	chr2	+	1137	6	FSM	ENSG00000119782.14	ENST00000438630.5	1137	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	311.078510990393	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTCCATCCTTATTTT	24044744	True	NA	19	True	AATAAA	-19	NA	24049730	24063681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_24049887_24053901_24053950_24054103_24054193_24054472_24054541_24060813_24060927_24063018
transcript_113067.nic	chr2	+	1120	5	NIC	ENSG00000119782.14	novel	1137	6	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	169	junction_3	293.666796727175	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTCCATCCTTATTTT	24044693	True	NA	19	True	AATAAA	-19	NA	24049679	24063681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_24049887_24053901_24053950_24054103_24054193_24060813_24060927_24063018
transcript_113068.nic	chr2	+	1075	5	NIC	ENSG00000119782.14	novel	1137	6	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	169	junction_3	302.063217721059	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTCCATCCTTATTTT	24044693	True	NA	19	True	AATAAA	-19	NA	24049679	24063681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_24049887_24053901_24053950_24054103_24054193_24060813_24060927_24063063
transcript_11307.known	chr1	+	2779	12	FSM	ENSG00000156875.14	ENST00000370152.8	2779	12	0	0	0	0	multi-exon	FALSE	canonical	3	557	junction_11	47.8204285680268	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGATCTGTGAGTTCCT	100033207	True	NA	31	True	AATAAA	-34	NA	100038094	100083377	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_100038317_100049908_100050005_100058665_100058729_100059877_100060006_100061834_100061950_100067976_100068196_100068472_100068587_100069613_100069686_100077164_100077278_100078450_100078549_100080495_100080660_100082002
transcript_113070.nic	chr2	+	1099	5	NIC	ENSG00000119782.14	novel	1137	6	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_2	329.741186387142	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTCCATCCTTATTTT	24044693	True	NA	19	True	AATAAA	-19	NA	24049679	24063681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_24049887_24053901_24053950_24054472_24054541_24060813_24060927_24063018
transcript_113071.known	chr2	+	953	5	FSM	ENSG00000119782.14	ENST00000452109.1	953	5	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	340.95087622706	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGACAAACTCCTGTCCA	24044784	True	NA	9	True	AATAAA	-9	NA	24049770	24063671	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_24049887_24053901_24053950_24054472_24054541_24060813_24060927_24063063
transcript_113078.known	chr2	+	1010	4	FSM	ENSG00000119782.14	ENST00000380991.8	1010	4	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_3	213.830670287392	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTCCATCCTTATTTT	24044714	True	NA	19	True	AATAAA	-19	NA	24049700	24063681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_24049887_24053901_24053950_24060813_24060927_24063018
transcript_113079.known	chr2	+	925	4	FSM	ENSG00000119782.14	ENST00000380986.9	925	4	0	0	0	0	multi-exon	FALSE	canonical	3	580	junction_3	156.597147696459	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTCCATCCTTATTTT	24044754	True	NA	19	True	AATAAA	-19	NA	24049740	24063681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_24049887_24053901_24053950_24060813_24060927_24063063
transcript_113084.known	chr2	-	3848	4	FSM	ENSG00000163026.12	ENST00000295148.9	3848	4	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	19.2584757675391	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGCTGTTTTGGATGTT	-24045481	True	NA	-15	True	AATAAA	-15	NA	24047391	24029346	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_24031163_24032828_24032947_24037676_24039513_24047313
transcript_113086.known	chr2	-	3700	3	FSM	ENSG00000163026.12	ENST00000406895.3	3700	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	86	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGCTGTTTTGGATGTT	-24045451	True	NA	-15	True	AATAAA	-15	NA	24047361	24029346	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_24031163_24037676_24039513_24047313
transcript_113089.known	chr2	+	859	4	FSM	ENSG00000119782.14	ENST00000421839.1	859	4	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_2	193.044036426925	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTCCATCCTTATTTT	24053897	True	NA	19	True	AATAAA	-19	NA	24053910	24063681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_24053950_24054103_24054193_24060813_24060927_24063063
transcript_113090.known	chr2	-	651	4	FSM	ENSG00000115128.7	ENST00000233468.5	651	4	0	0	0	0	multi-exon	FALSE	canonical	3	2549	junction_3	73.9233837609363	670	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTCAGTCTTTTCTCTTG	-24058901	True	NA	-7	True	AATAAA	-20	NA	24076326	24067585	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_24067852_24068320_24068460_24074075_24074195_24076199
transcript_113097.known	chr2	-	1635	6	FSM	ENSG00000115129.14	ENST00000335934.8	1635	6	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_5	48.4916487655349	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGGCACGCGGACTGGGG	-24085205	False	NA	-7	True	AATAAA	-14	NA	24085215	24077432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_24077762_24079443_24079641_24080818_24081032_24082884_24083153_24084188_24084332_24084730
transcript_113099.nic	chr2	-	1135	6	NIC	ENSG00000115129.14	novel	1635	6	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_3	68.5816301935147	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGGCACGCGGACTGGGG	-24082968	True	NA	-7	True	AATAAA	-14	NA	24084831	24077432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_24077762_24079443_24079641_24080818_24081032_24083000_24083153_24084188_24084332_24084730
transcript_1131.known	chr1	+	584	3	FSM	ENSG00000197530.13	ENST00000511910.1	584	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	213.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTTGCCTCTGCTGTCTG	1627608	False	NA	9	True	TATAAA	-15	NA	1629105	1630603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1629312_1629638_1629705_1630291
transcript_113104.nic	chr2	-	825	4	ISM	ENSG00000115129.14	ENST00000335934.8	1635	6	357	3313	-24	0	5prime_fragment	FALSE	canonical	3	78	junction_3	62.4179461373089	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGCTGTGTATCAGTC	-24082995	True	NA	0	True	AATAAA	-22	NA	24084858	24080745	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_24081032_24082884_24083153_24084188_24084332_24084730
transcript_113108.known	chr2	-	1653	5	FSM	ENSG00000115129.14	ENST00000238721.9	1653	5	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_2	20.7484939212464	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGGCACGCGGACTGGGG	-24082971	True	NA	-7	True	AATAAA	-14	NA	24084834	24077432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_24077762_24079443_24079641_24080818_24081032_24082884_24083153_24084188
transcript_113109.known	chr2	-	677	3	FSM	ENSG00000115129.14	ENST00000413037.1	677	3	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_1	6	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGCTGTGTATCAGTC	-24084301	False	NA	0	True	AATAAA	-22	NA	24084311	24080745	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_24081032_24082884_24083153_24084188
transcript_113113.nnic	chr2	-	2315	18	NIC	ENSG00000198399.16	novel	4563	30	NA	NA	-9	10610	combination_of_known_splicesites	TRUE	canonical	3	6	junction_16	14.0135870795942	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATATAGCTGATATATTT	-24358602	True	NA	61	True	AAAAAG	-24	NA	24360518	24275712	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_24275850_24286211_24286352_24293687_24293776_24295663_24295805_24298664_24298815_24299908_24300172_24301153_24301240_24301964_24302103_24303798_24303863_24308616_24308757_24310283_24310381_24310488_24310693_24312211_24312376_24313459_24313524_24315131_24315225_24321813_24321881_24328051_24328116_24360303
transcript_113116.nic	chr2	-	2537	17	ISM	ENSG00000198399.16	ENST00000361999.7	5814	39	-498	72849	-271	10610	5prime_fragment	FALSE	canonical	3	30	junction_12	7.98338117591788	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATATAGCTGATATATTT	-24360794	False	NA	61	True	AAAAAG	-24	NA	24360807	24275712	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_24275850_24286211_24286352_24293687_24293776_24295663_24295805_24298664_24298815_24299908_24300172_24301153_24301240_24301964_24302103_24303798_24303863_24308616_24308757_24310283_24310381_24310488_24310693_24312211_24312376_24313459_24313524_24315131_24315225_24328051_24328116_24360303
transcript_113121.nnic	chr2	-	2304	16	NIC	ENSG00000198399.16	novel	2066	17	NA	NA	-271	-450	combination_of_known_splicesites	FALSE	canonical	3	6	junction_14	14.8901160356646	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGCAGTTCAGTAACACAC	-24360794	False	NA	NA	False	ATTAAA	-16	NA	24360807	24293710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_24293776_24295663_24295805_24298664_24298815_24299908_24300172_24301153_24301240_24301964_24302103_24303798_24303863_24308616_24308757_24310283_24310381_24310488_24310693_24312211_24312376_24313459_24313524_24315131_24315225_24321813_24321881_24328051_24328116_24360303
transcript_113122.nic	chr2	-	2237	15	ISM	ENSG00000198399.16	ENST00000406921.7	4563	30	-299	73392	-271	-450	5prime_fragment	FALSE	canonical	3	30	junction_10	8.16569479153926	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGCAGTTCAGTAACACAC	-24360794	False	NA	NA	False	ATTAAA	-16	NA	24360807	24293710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_24293776_24295663_24295805_24298664_24298815_24299908_24300172_24301153_24301240_24301964_24302103_24303798_24303863_24308616_24308757_24310283_24310381_24310488_24310693_24312211_24312376_24313459_24313524_24315131_24315225_24328051_24328116_24360303
transcript_113130.known	chr2	-	4950	22	FSM	ENSG00000138031.15	ENST00000679454.1	4950	22	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_20	14.214744349305	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTGTGGAAATTCTGTT	-24919345	True	NA	0	True	ATTAAA	-20	NA	24920237	24819168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_24820115_24820723_24820849_24821516_24821641_24822510_24822631_24823208_24823356_24824377_24824537_24826044_24826127_24827545_24827609_24827901_24828162_24830708_24830826_24831661_24831750_24834484_24834647_24834793_24834937_24836916_24837046_24838444_24838623_24839872_24840032_24841258_24841387_24841555_24841668_24842253_24842385_24872569_24872720_24918312_24919185_24919682
transcript_113133.known	chr2	+	4106	8	FSM	ENSG00000138092.11	ENST00000380834.7	4106	8	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	60.2196659179151	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTACGTGGTGCTGGTGGTG	24788260	True	NA	16	True	AATAAA	-19	NA	24793424	24822376	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_24793502_24793851_24793966_24799674_24799845_24814375_24814494_24815496_24815757_24816645_24816818_24817669_24817842_24819353
transcript_113138.known	chr2	+	4085	8	FSM	ENSG00000138092.11	ENST00000260662.2	4085	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	69.4732366616447	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTACGTGGTGCTGGTG	24788297	True	NA	13	True	AATAAA	-16	NA	24793461	24822373	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_24793521_24793851_24793966_24799674_24799845_24814375_24814494_24815496_24815757_24816645_24816818_24817669_24817842_24819353
transcript_113145.known	chr2	+	4272	7	FSM	ENSG00000138092.11	ENST00000473706.5	4272	7	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	58.3666571482954	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTACGTGGTGCTGGTGGTG	24792897	True	NA	16	True	AATAAA	-19	NA	24793144	24822376	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_24793502_24799674_24799845_24814375_24814494_24815496_24815757_24816645_24816818_24817669_24817842_24819353
transcript_113162.known	chr2	+	1579	5	FSM	ENSG00000138092.11	ENST00000491031.5	1579	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	61.8157544643758	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAAGGGTCAGTAAACAC	24788235	True	NA	NA	False	NA	NA	NA	24793399	24816571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_24793502_24793851_24793966_24799674_24799845_24814375_24814494_24815496
transcript_113166.known	chr2	+	748	4	FSM	ENSG00000138092.11	ENST00000486527.6	748	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	65.8685559783017	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTTACTGCTGGCTTG	24788280	True	NA	NA	False	NA	NA	NA	24793444	24814782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_24793502_24793851_24793966_24799674_24799845_24814375
transcript_113171.nic	chr2	+	1128	3	ISM	ENSG00000138092.11	ENST00000498362.1	761	6	-53	2531	0	474	5prime_fragment	FALSE	canonical	3	67	junction_1	76	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTCAATAGTTTGACATT	24788260	True	NA	NA	False	NA	NA	NA	24793424	24815256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_24793502_24799674_24799845_24814375
transcript_113173.known	chr2	-	1120	2	FSM	ENSG00000184924.6	ENST00000328379.6	1120	2	0	0	0	0	multi-exon	FALSE	canonical	3	1200	junction_1	0	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTTCTTGTCATTTCA	-24786506	False	NA	1	True	AATGAA	-18	NA	24793391	24789727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_24790582_24793125
transcript_113174.known	chr2	-	624	2	FSM	ENSG00000184924.6	ENST00000474668.1	624	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTCCTCTTATTAATAAG	-24786189	False	NA	NA	False	ATTAAA	-16	NA	24793074	24790265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_24790582_24792766
transcript_113176.known	chr2	-	1378	9	FSM	ENSG00000115137.12	ENST00000380809.7	1378	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	4.14578098794425	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTCAGCTCTGTAATTAT	-24971859	True	NA	NA	False	NA	NA	NA	24972062	24947358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_24947749_24951393_24951555_24953549_24953636_24957042_24957166_24957809_24957975_24958546_24958602_24963404_24963475_24967210_24967294_24971817
transcript_113178.known	chr2	-	4847	7	FSM	ENSG00000115137.12	ENST00000264711.7	4847	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	5.63964143856288	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGGTCTGTGGGCTGCAT	-24971752	False	203	-4	True	AGTAAA	-14	NA	24971955	24943641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_24947749_24951393_24951555_24957042_24957166_24957809_24957975_24963404_24963475_24967210_24967294_24971817
transcript_113180.known	chr2	+	7486	23	FSM	ENSG00000084710.14	ENST00000403714.8	7486	23	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_12	3.76148379374131	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTGTCTGTTTGATTT	25041524	True	NA	18	True	AATAAA	-18	NA	25042075	25159135	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_25042320_25091324_25091402_25093002_25093131_25103636_25103788_25121672_25121795_25128182_25128333_25129974_25130110_25130551_25130631_25131367_25131504_25131749_25131912_25132902_25133015_25133382_25133435_25135466_25135640_25136522_25136599_25137340_25137503_25139058_25139191_25141365_25141434_25143734_25143863_25144959_25145052_25149693_25149743_25151913_25152021_25153711_25153762_25154234
transcript_113181.known	chr2	-	883	4	FSM	ENSG00000115138.11	ENST00000449220.1	883	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	27.5801861245835	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACGCCCCTGGTGACGCTG	-25168545	False	NA	NA	False	NA	NA	NA	25168571	25161145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_25161753_25164640_25164793_25165635_25165686_25168497
transcript_113182.known	chr2	-	1128	3	FSM	ENSG00000115138.11	ENST00000395826.7	1128	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	11.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAGCAGCATGGATCGGA	-25168446	True	NA	49	True	AATAAA	-23	NA	25168580	25160859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_25161753_25164640_25164793_25168497
transcript_113186.known	chr2	-	9421	23	FSM	ENSG00000119772.19	ENST00000321117.10	9421	23	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_17	192.378248499844	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAAAAGCACCGTAATAAT	-25341596	True	NA	41	True	AATAAA	-28	NA	25341925	25227873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_25234421_25235706_25235826_25236935_25237006_25239129_25239216_25240301_25240451_25240639_25240731_25241561_25241708_25243897_25243983_25244154_25244339_25244539_25244653_25245252_25245333_25246019_25246065_25246159_25246310_25246619_25246777_25247050_25247159_25247590_25247750_25248036_25248253_25274940_25275088_25275499_25275544_25282440_25282712_25300138_25300244_25313912_25314162_25341825
transcript_113187.known	chr2	-	9501	23	FSM	ENSG00000119772.19	ENST00000264709.7	9501	23	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_22	195.292157700979	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGTTTTGTCTTGCGTCT	NA	False	NA	60	True	AAAAAG	-25	NA	25342590	25227854	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_25234421_25235706_25235826_25236935_25237006_25239129_25239216_25240301_25240451_25240639_25240731_25241561_25241708_25243897_25243983_25244154_25244339_25244539_25244653_25245252_25245333_25246019_25246065_25246159_25246310_25246619_25246777_25247050_25247159_25247590_25247750_25248036_25248253_25274940_25275088_25275499_25275544_25282440_25282712_25300138_25300244_25313912_25314162_25342429
transcript_1132.known	chr1	+	1578	2	FSM	ENSG00000197530.13	ENST00000507082.1	1578	2	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGTAACTCTCTGAGT	1614539	True	NA	NA	False	NA	NA	NA	1615913	1617898	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1616101_1616507
transcript_113200.nic	chr2	-	3587	19	NIC	ENSG00000119772.19	novel	3589	19	NA	NA	40	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_17	126.315399880274	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTGCTTTCCTGTCTAA	-25246517	True	NA	-23	True	AATAAA	-17	NA	25252271	25232976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_25234421_25235706_25235826_25236935_25237006_25239129_25239216_25240301_25240451_25240639_25240731_25241561_25241708_25243897_25243983_25244154_25244339_25244539_25244653_25245252_25245333_25246019_25246065_25246159_25246310_25246619_25246777_25247050_25247159_25247590_25247750_25248036_25248253_25249617_25249725_25252193
transcript_113203.known	chr2	-	3589	19	FSM	ENSG00000119772.19	ENST00000380746.8	3589	19	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_17	115.484125893273	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGCTTTCCTGTCTAAG	-25252294	False	NA	-22	True	AATAAA	-18	NA	25252311	25232975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_25234421_25235706_25235826_25236935_25237006_25239129_25239216_25240301_25240451_25240639_25240731_25241561_25241708_25243897_25243983_25244154_25244339_25244539_25244653_25245252_25245333_25246019_25246065_25246159_25246310_25246619_25246777_25247050_25247159_25247590_25247750_25248036_25248253_25249656_25249725_25252193
transcript_113225.known	chr2	-	3585	18	FSM	ENSG00000119772.19	ENST00000683760.1	3585	18	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_17	106.867637952387	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCCCACCTGGAGCAAATA	-25252115	False	NA	-61	True	NA	NA	NA	25252132	25233014	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_25234421_25235706_25235826_25236935_25237006_25239129_25239216_25240301_25240451_25240639_25240731_25241561_25241708_25243897_25243983_25244154_25244339_25244539_25244653_25245252_25245333_25246019_25246065_25246159_25246310_25246619_25246777_25247050_25247159_25247590_25247750_25248036_25248253_25251911
transcript_113226.known	chr2	-	2300	18	FSM	ENSG00000119772.19	ENST00000402667.1	2300	18	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_17	66.7713134848961	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAGGATGGAGAGAAGTAT	-25252294	False	NA	-42	True	AATAAA	-12	NA	25252311	25234196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_25234421_25235706_25235826_25236935_25237006_25239129_25239216_25240301_25240451_25240639_25240731_25241561_25241708_25243897_25243983_25244154_25244339_25244539_25244653_25245252_25245333_25246019_25246065_25246159_25246310_25246619_25246777_25247050_25247159_25247590_25247750_25248036_25248253_25252193
transcript_11323.nic	chr1	-	741	6	ISM	ENSG00000156876.10	ENST00000462159.1	3972	16	-51	36831	-51	-36824	5prime_fragment	FALSE	canonical	3	62	junction_1	7.91454357496375	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTCAAATTTCATTTTG	-100131635	True	NA	NA	False	NA	NA	NA	100133006	100120393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_100120460_100121377_100121550_100122379_100122485_100123209_100123290_100125881_100125943_100132749
transcript_11327.known	chr1	+	3130	11	FSM	ENSG00000122435.11	ENST00000370141.8	3128	11	0	-2	0	2	multi-exon	FALSE	canonical	3	45	junction_6	8.46404158779953	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTCATTTATGTTTGAT	100131908	True	NA	9	True	AATAAA	-20	NA	100133162	100150498	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_100133316_100136881_100136929_100137018_100137086_100139648_100139712_100140181_100140252_100140407_100140515_100140851_100141020_100143136_100143210_100144068_100144144_100147893_100148327_100148624
transcript_113282.known	chr2	-	1775	4	FSM	ENSG00000119772.19	ENST00000406659.3	1775	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	21.4631467093403	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGAAGCTTTTATTCATT	NA	False	NA	-5	True	AATACA	-15	NA	25342590	25281451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_25282712_25300138_25300244_25313912_25314162_25342429
transcript_113287.known	chr2	-	2464	20	FSM	ENSG00000138101.20	ENST00000288642.12	2464	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	66.5507949633159	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCTTGTGTGTTTGTGA	NA	False	NA	-24	True	AAAAAG	-5	NA	25673647	25377244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_25377554_25379289_25379324_25383835_25383890_25387288_25387379_25388201_25388362_25427534_25427632_25432885_25433000_25433909_25433996_25451547_25451636_25455404_25455495_25482795_25482874_25531472_25531598_25576837_25577005_25580720_25580827_25596085_25596241_25607235_25607322_25628170_25628385_25639013_25639095_25652593_25652662_25673385
transcript_113288.known	chr2	-	2420	20	FSM	ENSG00000138101.20	ENST00000407661.7	2420	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	75.5018298837152	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGTGTGTTTGTGACC	-25668336	True	NA	-22	True	AAAAAG	-7	NA	25673634	25377242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_25377554_25379289_25379324_25387288_25387379_25388201_25388362_25419514_25419536_25427534_25427632_25432885_25433000_25433909_25433996_25451547_25451636_25455404_25455495_25482795_25482874_25531472_25531598_25576837_25577005_25580720_25580827_25596085_25596241_25607235_25607322_25628170_25628385_25639013_25639095_25652593_25652662_25673385
transcript_113289.known	chr2	-	2160	18	FSM	ENSG00000138101.20	ENST00000398951.6	2160	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	66.171581518746	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGTGTGTTTGTGACC	-25668252	True	NA	-22	True	AAAAAG	-7	NA	25673550	25377242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_25377554_25379289_25379324_25387288_25387379_25388201_25388362_25427534_25427632_25432885_25433000_25433909_25433996_25451547_25451636_25455404_25455495_25482795_25482874_25531472_25531598_25576837_25577005_25580720_25580827_25607235_25607322_25628170_25628385_25639013_25639095_25652593_25652662_25673385
transcript_11329.nic	chr1	+	3108	11	NIC	ENSG00000122435.11	novel	3128	11	NA	NA	-7	2	intron_retention	FALSE	canonical	3	33	junction_5	11.3846387733648	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTCATTTATGTTTGAT	100131888	True	NA	9	True	AATAAA	-20	NA	100133142	100150498	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_100133316_100136881_100136929_100137018_100137086_100139648_100139712_100140181_100140252_100140449_100140515_100140851_100141020_100143136_100143210_100144068_100144144_100147893_100148327_100148624
transcript_113292.nic	chr2	-	1086	7	ISM	ENSG00000143970.18	ENST00000336112.9	8886	12	-70	29891	-49	1179	5prime_fragment	FALSE	canonical	0	0	junction_5	15.3015975926989	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTTTGCTTACAAAGAC	-25875922	True	NA	-1	True	NA	NA	NA	25878536	25767582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_25767727_25768741_25768869_25771439_25771541_25799384_25799536_25806228_25806338_25845480_25845564_25878165
transcript_113296.known	chr2	-	8886	12	FSM	ENSG00000143970.18	ENST00000336112.9	8886	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	12.0707282025089	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAAACCTTGGAGTT	-25875852	True	NA	-28	True	ATTAAA	-5	NA	25878466	25737691	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_25744477_25749695_25750414_25753533_25753640_25756017_25756115_25759481_25759646_25767582_25767727_25768741_25768869_25771439_25771541_25799384_25799536_25806228_25806338_25845480_25845564_25878165
transcript_113297.known	chr2	-	5452	9	FSM	ENSG00000084731.15	ENST00000417737.5	5452	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	87.8186163350346	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAGTTGACTGCCTTACTT	-25981497	True	NA	-16	True	AATAAA	-17	NA	25982497	25926601	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_25929072_25929304_25929478_25929954_25930064_25938234_25938349_25951788_25951906_25954266_25954386_25955540_25955664_25956342_25956445_25980372
transcript_113299.known	chr2	-	5342	8	FSM	ENSG00000084731.15	ENST00000264712.8	5342	8	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_3	21.4675835355809	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTGCCTTACTTCTCT	-25981497	True	NA	-12	True	AATAAA	-21	NA	25982497	25926597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_25929072_25929304_25929478_25929954_25930064_25951788_25951906_25954266_25954386_25955540_25955664_25956342_25956445_25980372
transcript_1133.known	chr1	-	2038	1	FSM	ENSG00000272106.1	ENST00000607222.1	2038	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTTTGTTTTGTTTTG	-1615407	True	NA	-1	True	AATAAA	-20	NA	1615795	1613757	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1613800_1615800
transcript_113303.known	chr2	-	730	4	FSM	ENSG00000084731.15	ENST00000475453.1	730	4	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_2	23.9072281027215	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGATGGGCCCACGTGCTGG	-25980533	False	NA	NA	False	AATAAA	-18	NA	25980622	25954130	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_25954386_25955540_25955664_25956342_25956445_25980372
transcript_113306.known	chr2	+	3561	6	FSM	ENSG00000084733.11	ENST00000264710.5	3561	6	0	0	0	0	multi-exon	FALSE	canonical	3	1306	junction_3	85.2797748589899	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTGGTTTGGTTTTCA	26034049	False	NA	14	True	TATAAA	-19	NA	26034083	26137454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_26034736_26098661_26098723_26109767_26109907_26127143_26127234_26127849_26127952_26134937
transcript_11331.nic	chr1	+	928	10	ISM	ENSG00000122435.11	ENST00000370141.8	3128	11	0	2498	0	-2498	5prime_fragment	FALSE	canonical	3	45	junction_6	8.51288058194576	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACACTTTGGCCAAGGAA	100131908	True	NA	NA	False	CATAAA	-24	NA	100133162	100147998	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_100133316_100136881_100136929_100137018_100137086_100139648_100139712_100140181_100140252_100140407_100140515_100140851_100141020_100143136_100143210_100144068_100144144_100147893
transcript_113311.nic	chr2	+	1299	3	ISM	ENSG00000084733.11	ENST00000264710.5	3561	6	3	27098	3	-24680	5prime_fragment	FALSE	canonical	3	1426	junction_1	63	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAATGTTGTTATTTGCTA	26034052	False	NA	NA	False	NA	NA	NA	26034086	26110356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_26034736_26098661_26098723_26109767
transcript_113315.known	chr2	+	5138	6	FSM	ENSG00000157833.13	ENST00000407684.1	5138	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	45.4066074486963	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGAGTACAAGTGGCAT	26180632	False	NA	23	True	AATAAA	-14	NA	26180715	26189644	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_26182494_26182966_26183098_26184232_26185277_26186188_26186359_26187230_26187316_26187714
transcript_113317.known	chr2	+	4164	6	FSM	ENSG00000157833.13	ENST00000401533.7	4164	6	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_4	32.2266970072951	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGGTGCCAGCTGCTTT	26171885	True	NA	42	True	AATAAA	-33	NA	26173087	26189663	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_26173333_26176343_26176485_26182966_26183098_26184232_26185277_26186188_26186359_26187230
transcript_113318.nic	chr2	+	940	2	ISM	ENSG00000157833.13	ENST00000401533.7	4164	6	-22	12647	-22	-10442	5prime_fragment	FALSE	canonical	3	177	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTATGCTAATGGACTACC	26171863	True	NA	12	True	ATTAAA	-18	NA	26173065	26177016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_26173333_26176343
transcript_113319.known	chr2	-	2748	21	FSM	ENSG00000084754.12	ENST00000643063.1	2748	21	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	311.886273343345	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCTGCACCCAGCCAAAC	-26231919	True	NA	-61	True	NA	NA	NA	26244604	26190921	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_26191396_26191482_26191629_26192309_26192425_26193576_26193773_26194569_26194639_26195091_26195233_26197690_26197778_26201148_26201321_26204061_26204197_26209779_26209890_26210694_26210815_26212569_26212627_26214442_26214562_26215052_26215176_26230191_26230295_26232159_26232280_26234216_26234356_26236854_26236989_26238933_26239005_26239101_26239144_26244529
transcript_113326.known	chr2	-	2943	20	FSM	ENSG00000084754.12	ENST00000380649.8	2943	20	0	0	0	0	multi-exon	FALSE	canonical	3	838	junction_11	71.4999176723079	1226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTCATTGTGTGATCTT	-26231947	True	NA	-7	True	ATTAAA	-20	NA	26244632	26190634	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_26191396_26191482_26191629_26192309_26192425_26193576_26193773_26194569_26194639_26195091_26195233_26197690_26197778_26201148_26201321_26204061_26204197_26209779_26209890_26212569_26212627_26214442_26214562_26215052_26215176_26230191_26230295_26232159_26232280_26234216_26234356_26236854_26236989_26238933_26239005_26239101_26239144_26244529
transcript_113329.known	chr2	-	2982	19	FSM	ENSG00000084754.12	ENST00000492433.2	2982	19	0	0	0	0	multi-exon	FALSE	canonical	3	838	junction_10	69.195576287634	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTTTCCCCAGCCTGGA	-26231919	True	NA	-27	True	NA	NA	NA	26244604	26190654	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_26191629_26192309_26192425_26193576_26193773_26194569_26194639_26195091_26195233_26197690_26197778_26201148_26201321_26204061_26204197_26209779_26209890_26212569_26212627_26214442_26214562_26215052_26215176_26230191_26230295_26232159_26232280_26234216_26234356_26236854_26236989_26238933_26239005_26239101_26239144_26244529
transcript_113330.known	chr2	-	2158	19	FSM	ENSG00000084754.12	ENST00000646483.1	2158	19	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_16	242.051704761148	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCCTCATGCCTCGCTC	-26244585	False	NA	NA	False	NA	NA	NA	26244596	26191249	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_26191396_26191482_26191629_26192309_26192425_26193576_26193773_26194569_26194639_26195091_26195233_26197690_26197778_26201148_26201321_26204061_26204197_26209779_26209890_26212569_26212627_26214442_26214562_26215052_26215176_26230191_26230295_26232159_26232280_26234216_26234356_26238933_26239005_26239101_26239144_26244529
transcript_113332.known	chr2	-	2576	19	FSM	ENSG00000084754.12	ENST00000645274.1	2576	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	329.654008669846	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTCAGCATCTTTGCC	-26231931	True	NA	-20	True	AATAAA	-9	NA	26244616	26190880	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_26191396_26191482_26191629_26192309_26192425_26193576_26193773_26194569_26194639_26195091_26195233_26197690_26197778_26201148_26201321_26204061_26204197_26209779_26209890_26212569_26212627_26214442_26214577_26215052_26215176_26230191_26230295_26234216_26234356_26236854_26236989_26238933_26239005_26239101_26239144_26244529
transcript_113342.known	chr2	+	1997	16	FSM	ENSG00000138029.14	ENST00000317799.10	1997	16	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_12	39.3307343774136	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGTTTACCTCATTTTT	26242122	True	NA	14	True	AATAAA	-17	NA	26244938	26290465	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_26244991_26254246_26254319_26254429_26254475_26263379_26263480_26269952_26269998_26273650_26273751_26277072_26277161_26278613_26278802_26279134_26279316_26279993_26280116_26282844_26282925_26283003_26283052_26284116_26284205_26284882_26284958_26285406_26285572_26289917
transcript_113347.known	chr2	+	2142	15	FSM	ENSG00000138029.14	ENST00000537713.5	2142	15	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	141.73093580184	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTGTTTACCTCATTTT	26244737	True	NA	13	True	AATAAA	-16	NA	26244747	26290464	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_26244991_26254246_26254319_26254429_26254475_26263379_26263480_26273650_26273751_26277072_26277161_26278613_26278802_26279134_26279316_26279993_26280116_26282844_26282925_26283003_26283052_26284116_26284205_26284882_26284958_26285406_26285572_26289917
transcript_113357.known	chr2	+	670	3	FSM	ENSG00000138029.14	ENST00000479347.1	670	3	0	0	0	0	multi-exon	FALSE	canonical	3	493	junction_1	13.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATATGAAATGAAAGAGTAA	26242103	True	NA	NA	False	AATAGA	-41	NA	26244919	26254956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_26244991_26254246_26254319_26254429
transcript_113358.known	chr2	-	2688	20	FSM	ENSG00000084754.12	ENST00000643233.1	2688	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	235.656435682691	1121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAACTCTGTGTCAGCA	-26231941	True	NA	-28	True	AATAAA	-1	NA	26244626	26190888	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_26191396_26191482_26191629_26192309_26192425_26193576_26193773_26194569_26194639_26195091_26195233_26197690_26197778_26201148_26201321_26204061_26204197_26209779_26209890_26212569_26212627_26214442_26214562_26215052_26215176_26230191_26230295_26232159_26232280_26234216_26234356_26236854_26236989_26238933_26239005_26239101_26239144_26244524
transcript_113359.known	chr2	+	2567	2	FSM	ENSG00000286707.1	ENST00000653720.1	2567	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTAAATAATTCCTCCT	26298558	True	NA	-13	True	TTTAAA	-30	NA	26298569	26306340	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_26298627_26303830
transcript_113362.known	chr2	+	8066	10	FSM	ENSG00000138018.19	ENST00000260585.12	8066	10	0	0	0	0	multi-exon	TRUE	canonical	3	64	junction_7	13.0639452948436	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTCAGATTGTCTTCT	26341181	True	NA	24	True	AATAAA	-31	NA	26346142	26395885	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_26346290_26364301_26364371_26364831_26364941_26367145_26367221_26373366_26373630_26375039_26375149_26383298_26383348_26384958_26385140_26386353_26386537_26389004
transcript_113363.nic	chr2	+	1816	6	ISM	ENSG00000138018.19	ENST00000260585.12	8066	10	-83	19776	-83	2603	5prime_fragment	FALSE	canonical	3	79	junction_3	8.95767827062348	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAATAAATAAAAAATAACCC	26341098	True	NA	NA	False	NA	NA	NA	26346059	26376109	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_26346290_26364301_26364371_26364831_26364941_26367145_26367221_26373366_26373630_26375039
transcript_113366.known	chr2	+	3902	6	FSM	ENSG00000213699.9	ENST00000344420.10	3902	6	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_2	5.16139516022558	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGTTCTGCAGGCTATA	26762810	True	NA	20	True	TATAAA	-20	NA	26764283	26781231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_26764427_26774250_26774324_26775043_26775216_26775463_26775677_26776371_26776483_26778041
transcript_113369.known	chr2	+	745	6	FSM	ENSG00000115163.15	ENST00000460030.1	745	6	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_5	186.02214921885	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTTTTGTGCACTTTT	26781124	False	NA	20	True	AATAAA	-30	NA	26786142	26801067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_26786297_26792130_26792241_26792755_26792834_26793144_26793327_26793811_26793894_26800928
transcript_11337.known	chr1	-	10799	11	FSM	ENSG00000137992.15	ENST00000370132.8	10799	11	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_8	8.28009661779378	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTGTCTCCACTGTTGA	-100247650	True	NA	-2	True	AATAAA	-20	NA	100249834	100186918	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_100196423_100206229_100206302_100206444_100206637_100210693_100210772_100214816_100214984_100215982_100216200_100218625_100218748_100230732_100230915_100235435_100235512_100240760_100240885_100249769
transcript_113372.known	chr2	+	1389	5	FSM	ENSG00000115163.15	ENST00000335756.9	1389	5	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_3	64.6722506180201	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACTTACTGTTACAGCAT	26781037	True	NA	NA	False	AATAAA	-22	NA	26786055	26794589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_26786297_26792130_26792241_26792755_26792834_26793144_26793327_26793811
transcript_113376.nic	chr2	+	831	5	NIC	ENSG00000115163.15	novel	745	6	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_2	263.108817792183	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTTTTGTGCACTTTT	26780960	True	NA	20	True	AATAAA	-30	NA	26785978	26801067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_26786297_26792130_26792241_26793144_26793327_26793811_26793894_26800928
transcript_113378.known	chr2	+	689	5	FSM	ENSG00000115163.15	ENST00000472719.5	689	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	242.508118420807	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATTTTGAAAACATCAGAT	26781008	True	NA	-88	True	NA	NA	NA	26786026	26794076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_26786081_26792130_26792241_26792755_26792834_26793144_26793327_26793811
transcript_113380.known	chr2	+	1299	4	FSM	ENSG00000115163.15	ENST00000233505.12	1299	4	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	258.059855244648	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACTTACTGTTACAGCAT	26781049	True	NA	NA	False	AATAAA	-22	NA	26786067	26794589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_26786297_26792130_26792241_26793144_26793327_26793811
transcript_113387.known	chr2	+	5178	13	FSM	ENSG00000157851.17	ENST00000288699.11	5178	13	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	6.9337139318614	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGACTCTGTTGTGTTTC	26847595	True	NA	13	True	ATTAAA	-17	NA	26848131	26950351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_26848255_26898495_26898761_26924886_26925046_26927252_26927433_26928254_26928324_26931639_26931685_26933257_26933334_26934577_26934735_26940030_26940173_26941949_26942093_26942542_26942751_26944655_26944825_26946909
transcript_113392.known	chr2	+	1972	13	FSM	ENSG00000157851.17	ENST00000401478.5	1972	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	12.3903524297468	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCTGTAGTCCTTTCT	26847752	False	NA	17	True	NA	NA	NA	26848288	26947197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_26848360_26898495_26898761_26924886_26925046_26927252_26927433_26928254_26928324_26931639_26931685_26933257_26933334_26934577_26934735_26940030_26940173_26941949_26942093_26942542_26942751_26944655_26944825_26946909
transcript_113395.known	chr2	+	1801	7	FSM	ENSG00000084764.12	ENST00000405074.7	1801	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	11.6714276000077	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCCATGTGTCCCTCAAC	26969930	True	NA	9	True	AATAAA	-18	NA	26970657	27027196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_26970803_27022211_27022340_27023331_27023478_27024095_27024253_27025582_27025738_27025879_27026033_27026279
transcript_113396.known	chr2	+	1890	7	FSM	ENSG00000084764.12	ENST00000233121.7	1890	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	14.0168549333373	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGTCCAGGTCCAGTG	26969909	True	NA	32	True	AATAAA	-41	NA	26970636	27027219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_26970803_27022211_27022340_27023331_27023478_27024095_27024298_27025582_27025738_27025879_27026033_27026279
transcript_1134.known	chr1	-	2534	21	FSM	ENSG00000248333.9	ENST00000340677.9	2534	21	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_19	57.3586087697392	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTCAGCCGGGACCACA	-1653001	True	NA	NA	False	NA	NA	NA	1659012	1635737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1635857_1635936_1636127_1636332_1636482_1636681_1636799_1636896_1637005_1637080_1637203_1637407_1637514_1637761_1637884_1638499_1638591_1640276_1640453_1641047_1641114_1641661_1641821_1641905_1642002_1642385_1642509_1645125_1645263_1649498_1649638_1652438_1652567_1655368_1655485_1657255_1657303_1657374_1657499_1658913
transcript_113400.nic	chr2	+	3772	5	NIC	ENSG00000084764.12	novel	1801	7	NA	NA	-2	0	intron_retention	FALSE	canonical	3	50	junction_2	5.24404424085076	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCCATGTGTCCCTCAAC	26969907	True	NA	9	True	AATAAA	-18	NA	26970634	27027196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_26970803_27022211_27022340_27023331_27025738_27025879_27026033_27026279
transcript_113405.nic	chr2	+	3131	18	NIC	ENSG00000119777.20	novel	2775	19	NA	NA	-21	0	intron_retention	TRUE	canonical	2	21	junction_9	107.944366037184	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATTCTTGTCTGCATCCT	NA	False	NA	18	True	AATAAA	-20	NA	27032888	27041693	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_27033167_27034066_27034267_27035134_27035286_27035593_27035729_27035969_27036053_27036486_27036593_27036704_27036787_27037076_27037179_27037560_27037703_27037814_27037893_27038145_27038238_27038483_27038533_27038701_27038816_27039046_27039165_27039740_27039838_27040029_27040199_27040344_27040497_27040710
transcript_113406.known	chr2	+	2700	18	FSM	ENSG00000119777.20	ENST00000321326.11	2700	18	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_17	84.664695869315	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTCTTGTCTGCATCCTC	27026965	True	NA	19	True	AATAAA	-21	NA	27032953	27041694	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27033167_27034066_27034267_27035134_27035286_27035593_27035729_27035969_27036053_27036486_27036593_27036704_27036787_27037076_27037179_27037560_27037703_27038145_27038238_27038483_27038533_27038701_27038816_27039046_27039165_27039740_27039838_27040029_27040199_27040344_27040497_27040710_27040955_27041243
transcript_113415.known	chr2	+	2978	17	FSM	ENSG00000119777.20	ENST00000238788.14	2978	17	0	0	0	0	multi-exon	FALSE	canonical	2	269	junction_10	29.0446181546599	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTCTTGTCTGCATCCTC	27026976	True	NA	19	True	AATAAA	-21	NA	27032964	27041694	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27033167_27034066_27034267_27035134_27035286_27035593_27035729_27035969_27036053_27036486_27036593_27036704_27036787_27037076_27037179_27037560_27037703_27038145_27038238_27038483_27038533_27038701_27038816_27039046_27039165_27039740_27039838_27040029_27040199_27040344_27040497_27040710
transcript_113435.known	chr2	+	2830	16	FSM	ENSG00000119777.20	ENST00000404032.7	2830	16	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	90.2157906848291	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATTCTTGTCTGCATCCT	27026988	True	NA	18	True	AATAAA	-20	NA	27032976	27041693	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27033167_27034066_27034267_27035134_27035286_27035969_27036053_27036486_27036593_27036704_27036787_27037076_27037179_27037560_27037703_27038145_27038238_27038483_27038533_27038701_27038816_27039046_27039165_27039740_27039838_27040029_27040199_27040344_27040497_27040710
transcript_11345.known	chr1	+	1534	12	FSM	ENSG00000137996.13	ENST00000260563.4	1534	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	81.6293781178126	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAATACATTTTTCTTTT	100259654	True	NA	NA	False	AATAAA	-18	NA	100266248	100291771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_100266421_100266523_100266625_100267499_100267539_100268151_100268296_100270556_100270681_100273393_100273453_100274823_100274966_100275598_100275724_100277257_100277317_100285227_100285323_100287098_100287204_100291402
transcript_113461.known	chr2	+	3261	16	FSM	ENSG00000084693.16	ENST00000487078.5	3261	16	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_13	131.288994207435	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTAGTTGCTTTGTATGT	27045544	True	NA	12	True	AATAAA	-20	NA	27051645	27070622	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27051794_27052912_27053174_27053401_27053574_27053895_27054060_27054629_27054808_27055074_27055254_27055681_27056139_27056622_27056793_27057302_27057439_27058399_27058603_27059189_27059405_27067493_27067647_27068631_27068745_27069047_27069095_27069572_27069707_27070091
transcript_113466.known	chr2	+	3188	15	FSM	ENSG00000084693.16	ENST00000360131.5	3188	15	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_13	119.51381100278	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGTGTAGTTGCTTTGT	27045566	True	NA	8	True	AATAAA	-16	NA	27051667	27070618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27051794_27052912_27053174_27053401_27053574_27053895_27054060_27054629_27054808_27055074_27055254_27055681_27056139_27056622_27056793_27057302_27057439_27058399_27058603_27059189_27059405_27067493_27067647_27068631_27068745_27069572_27069707_27070091
transcript_113474.nic	chr2	+	2629	12	ISM	ENSG00000084693.16	ENST00000487078.5	3261	16	-4	2787	-4	0	5prime_fragment	FALSE	canonical	3	82	junction_11	77.7923704007146	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACTGAACATTTACTATG	27045540	True	NA	2	True	AATAAA	-14	NA	27051641	27067835	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_27051794_27052912_27053174_27053401_27053574_27053895_27054060_27054629_27054808_27055074_27055254_27055681_27056139_27056622_27056793_27057302_27057439_27058399_27058603_27059189_27059405_27067493
transcript_113484.known	chr2	+	2382	11	FSM	ENSG00000084693.16	ENST00000323064.12	2382	11	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	35.3396378023318	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGCCTCTCCTACGAC	27045576	True	NA	16	True	AATAAA	-18	NA	27051677	27059535	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27051794_27052912_27053174_27053401_27053574_27053895_27054060_27054629_27054808_27055074_27055254_27055681_27056139_27056622_27056793_27057302_27057439_27058399_27058603_27059189
transcript_113494.known	chr2	+	1850	7	FSM	ENSG00000084693.16	ENST00000489683.5	1850	7	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	30.4380062129934	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATGTCAAACTGAGAATT	27045579	True	NA	-81	True	AAAAAG	-23	NA	27051680	27056464	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27051794_27052912_27053174_27053401_27053574_27053895_27054060_27054629_27054808_27055074_27055254_27055681
transcript_113497.known	chr2	-	442	3	FSM	ENSG00000228474.6	ENST00000456793.2	442	3	0	0	0	0	multi-exon	FALSE	canonical	3	3919	junction_2	486.5	1159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTGCTGCGGAGGGAGG	-27030255	True	NA	-1	True	TATAAA	-30	NA	27071654	27070471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27070722_27071325_27071464_27071600
transcript_113498.known	chr2	-	559	2	FSM	ENSG00000228474.6	ENST00000429985.1	559	2	0	0	0	0	multi-exon	FALSE	canonical	3	4892	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGTCCCAAAATCTTG	-27030250	True	NA	-16	True	TATAAA	-15	NA	27071649	27070486	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27070722_27071325
transcript_113500.known	chr2	+	3890	8	FSM	ENSG00000138080.14	ENST00000380320.9	3890	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	6.45233702322069	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAACGAACCGTTCTGCTA	27078478	True	NA	NA	False	AATAAA	-25	NA	27078614	27086403	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27079236_27080150_27080271_27080731_27080953_27082082_27084012_27084414_27084532_27084990_27085009_27085159_27085298_27085677
transcript_113502.nnic	chr2	+	2009	7	NIC	ENSG00000138080.14	novel	3890	8	NA	NA	-48	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	6.65206734782504	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAACGAACCGTTCTGCTA	27078430	True	NA	NA	False	AATAAA	-25	NA	27078566	27086403	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_27079236_27080150_27080271_27080731_27080953_27084414_27084532_27084990_27085009_27085159_27085298_27085677
transcript_113507.known	chr2	+	2411	8	FSM	ENSG00000138030.13	ENST00000260599.10	2411	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	54.539257532945	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATGTGTACAAGGCTCT	27085506	True	NA	20	True	TATAAA	-16	NA	27086746	27100751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27087352_27092331_27092449_27094476_27094612_27096728_27096802_27097502_27097650_27099195_27099285_27099419_27099578_27099664
transcript_113508.known	chr2	+	2397	8	FSM	ENSG00000138030.13	ENST00000260598.10	2397	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	79.1560071592027	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGCTCTCAAAAAGTTCT	27085531	True	NA	31	True	TATAAA	-27	NA	27086771	27100762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27087352_27092331_27092449_27094799_27094935_27096728_27096802_27097502_27097650_27099195_27099285_27099419_27099578_27099664
transcript_11351.known	chr1	+	2526	11	FSM	ENSG00000137996.13	ENST00000370128.9	2526	11	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_2	12.7455874717488	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTTCATTATTCTCTG	100259621	True	NA	21	True	AATAAA	-21	NA	100266215	100292769	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_100266421_100266523_100266625_100268151_100268296_100270556_100270681_100273393_100273453_100274823_100274966_100275598_100275724_100277257_100277317_100285227_100285323_100287098_100287204_100291402
transcript_113511.nnic	chr2	+	1540	7	NIC	ENSG00000138030.13	novel	2411	8	NA	NA	-28	0	intron_retention	FALSE	canonical	1	1	junction_1	71.422257657462	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTCCTCTCAATGTCTG	27086695	False	NA	8	True	AATAAA	-16	NA	27086718	27099969	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_27087352_27094476_27094612_27096728_27096802_27097502_27097650_27099195_27099285_27099419_27099578_27099664
transcript_113512.nnic	chr2	+	1503	7	NIC	ENSG00000138030.13	novel	2411	8	NA	NA	-9	0	intron_retention	FALSE	canonical	3	41	junction_2	54.1109970338747	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTCCTCTCAATGTCTG	27085497	True	NA	8	True	AATAAA	-16	NA	27086737	27099969	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_27087352_27092331_27092449_27096728_27096802_27097502_27097650_27099195_27099285_27099419_27099578_27099664
transcript_113515.nnic	chr2	+	1386	6	NIC	ENSG00000138030.13	novel	2411	8	NA	NA	-9	0	intron_retention	FALSE	canonical	3	72	junction_1	44.2429655425583	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTCCTCTCAATGTCTG	27085497	True	NA	8	True	AATAAA	-16	NA	27086737	27099969	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_27087352_27096728_27096802_27097502_27097650_27099195_27099285_27099419_27099578_27099664
transcript_113525.known	chr2	-	2127	9	FSM	ENSG00000138073.14	ENST00000260643.7	2127	9	0	0	0	0	multi-exon	FALSE	canonical	3	505	junction_7	27.8946119349239	1566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTACTCTTGTCAGCTGTT	-27125350	True	NA	-3	True	AATAAA	-29	NA	27134636	27130755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27131509_27131671_27131832_27132009_27132083_27132229_27132404_27132602_27132728_27132842_27132924_27133116_27133338_27133531_27133722_27134286
transcript_113539.nic	chr2	-	2387	8	NIC	ENSG00000138073.14	novel	2127	9	NA	NA	-36	0	intron_retention	FALSE	canonical	3	543	junction_7	19.8278303690257	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTACTCTTGTCAGCTGTT	NA	False	NA	-3	True	AATAAA	-29	NA	27134702	27130755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_27131509_27131671_27131832_27132009_27132083_27132229_27132404_27132602_27132728_27132842_27132924_27133116_27133722_27134286
transcript_113542.known	chr2	-	1910	8	FSM	ENSG00000138073.14	ENST00000406567.7	1910	8	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	193.155747667893	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAACTGAGACCCCAAAT	-27125326	True	NA	-22	True	AATAAA	-10	NA	27134612	27130774	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27131509_27131671_27131832_27132009_27132083_27132602_27132728_27132842_27132924_27133116_27133338_27133531_27133722_27134286
transcript_113554.known	chr2	+	1167	6	FSM	ENSG00000143994.14	ENST00000420647.5	1167	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.748331477354788	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTGAGGTTCATTTTCC	27123805	True	NA	6	True	ATTAAA	-21	NA	27123835	27130812	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27124063_27128944_27129128_27129513_27129627_27129753_27129928_27130226_27130417_27130532
transcript_113558.known	chr2	-	3057	6	FSM	ENSG00000138073.14	ENST00000468045.5	3057	6	0	0	0	0	multi-exon	FALSE	canonical	3	551	junction_2	10.6470653233649	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTACTCTTGTCAGCTGTT	-27125343	True	NA	-3	True	AATAAA	-29	NA	27134629	27130755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27131509_27131671_27132083_27132229_27132404_27132602_27132728_27132842_27132924_27133116
transcript_113559.known	chr2	-	2030	9	FSM	ENSG00000138073.14	ENST00000444452.5	2030	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	188.02110918724	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCCAAATGGTACTCTTG	-27125329	True	NA	-12	True	AATAAA	-20	NA	27134615	27130764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27131509_27131671_27131832_27132009_27132083_27132229_27132404_27132602_27132728_27132842_27132924_27133116_27133338_27133531_27133655_27134286
transcript_113568.known	chr2	-	2230	18	FSM	ENSG00000138074.15	ENST00000408041.5	2230	18	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_15	278.768187607814	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGACTCAGGACCCCGCC	-27211704	False	1825	NA	False	NA	NA	NA	27211752	27200435	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27200580_27200997_27201114_27201349_27201454_27201665_27201848_27201987_27202075_27202812_27202881_27203232_27203346_27203778_27203868_27204460_27204591_27204790_27204932_27205349_27205505_27206025_27206094_27206482_27206535_27206876_27206943_27207257_27207791_27208613_27208687_27211466_27211534_27211710
transcript_113596.nic	chr2	-	3040	17	NIC	ENSG00000138074.15	novel	3213	17	NA	NA	7	0	intron_retention	FALSE	canonical	3	120	junction_16	166.0252239872	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGCTCCTGTACTGTCT	-27209961	True	NA	0	True	AATAAA	-21	NA	27211786	27199586	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_27200580_27200997_27201114_27201349_27201454_27201665_27201848_27201987_27202075_27202812_27202881_27203232_27203346_27203778_27203868_27204460_27204591_27204790_27204932_27205349_27205505_27206025_27206094_27206482_27206535_27206876_27206943_27207257_27207791_27211466_27211534_27211710
transcript_113597.nic	chr2	-	3143	17	NIC	ENSG00000138074.15	novel	3213	17	NA	NA	-7	0	intron_retention	FALSE	canonical	3	229	junction_16	140.952216526559	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGCTCCTGTACTGTCT	-27211897	False	1512	0	True	AATAAA	-21	NA	27211945	27199586	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_27200580_27200997_27201114_27201349_27201454_27201665_27201848_27201987_27202075_27202812_27202881_27203232_27203346_27203778_27203868_27204460_27204591_27204790_27204932_27205349_27205505_27206025_27206094_27206482_27206535_27206876_27206943_27207257_27207791_27211466_27211534_27211766
transcript_113598.nic	chr2	-	3056	17	NIC	ENSG00000138074.15	novel	3213	17	NA	NA	39	0	intron_retention	FALSE	canonical	3	295	junction_16	126.030982673904	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGCTCCTGTACTGTCT	-27211943	False	NA	0	True	AATAAA	-21	NA	27211991	27199586	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_27200580_27200997_27201114_27201349_27201454_27201665_27201848_27201987_27202075_27202812_27202881_27203232_27203346_27203778_27203868_27204460_27204591_27204790_27204932_27205349_27205505_27206025_27206094_27206482_27206535_27206876_27206943_27207257_27207791_27211466_27211534_27211899
transcript_113599.known	chr2	-	3213	17	FSM	ENSG00000138074.15	ENST00000310574.8	3213	17	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_16	163.24464003452	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGCTCCTGTACTGTCT	-27210756	True	NA	0	True	AATAAA	-21	NA	27212268	27199586	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27200580_27200997_27201114_27201349_27201454_27201665_27201848_27201987_27202075_27202812_27202881_27203232_27203346_27203778_27203868_27204460_27204591_27204790_27204932_27205349_27205505_27206025_27206094_27206482_27206535_27206876_27206943_27207257_27207791_27211466_27211534_27212019
transcript_1136.known	chr1	-	2992	20	FSM	ENSG00000248333.9	ENST00000341832.11	2992	20	0	0	0	0	multi-exon	TRUE	canonical	3	85	junction_16	45.9945197265429	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCCGTGTCGTCCTTTGA	-1652993	True	NA	NA	False	ATTAAA	-18	NA	1659004	1635224	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1635857_1635936_1636127_1636332_1636482_1636681_1636799_1636896_1637005_1637080_1637203_1637407_1637514_1637761_1637884_1638499_1638591_1640276_1640453_1641047_1641114_1641661_1641821_1641905_1642002_1642385_1642509_1645125_1645263_1649498_1649638_1652438_1652567_1655368_1655485_1657374_1657499_1658913
transcript_11360.known	chr1	+	4231	16	FSM	ENSG00000079335.20	ENST00000336454.5	4231	16	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_7	5.47073019704764	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTTTTGGTGTTTATA	100351345	True	NA	7	True	AATAAA	-24	NA	100352505	100520277	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_100353004_100353761_100353853_100377545_100377622_100390731_100390825_100424221_100424302_100439931_100439999_100442933_100442997_100455404_100455493_100462650_100462882_100467955_100468095_100484291_100484452_100494817_100494931_100496001_100496050_100498084_100498208_100498928_100499263_100518250
transcript_11362.known	chr1	+	2446	15	FSM	ENSG00000079335.20	ENST00000361544.11	2446	15	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_7	5.59016994374947	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTTCCTTCCTTCTTTT	100351306	True	NA	NA	False	AGTAAA	-19	NA	100352466	100499465	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_100353004_100353761_100353853_100377545_100377622_100390731_100390825_100424221_100424302_100439931_100439999_100442933_100442997_100455404_100455493_100462650_100462882_100467955_100468095_100484291_100484452_100494817_100494931_100496001_100496050_100498084_100498208_100498928
transcript_11363.nic	chr1	+	4494	14	ISM	ENSG00000079335.20	ENST00000361544.11	2446	15	-18	-1309	-18	1309	intron_retention	FALSE	canonical	3	32	junction_7	5.49125178386915	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGAGGATGAGGATGTTT	100351288	True	NA	NA	False	AAAAAG	-4	NA	100352448	100500774	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_100353004_100353761_100353853_100377545_100377622_100390731_100390825_100424221_100424302_100439931_100439999_100442933_100442997_100455404_100455493_100462650_100462882_100467955_100468095_100484291_100484452_100494817_100494931_100496001_100496050_100498084
transcript_11365.known	chr1	+	1873	11	FSM	ENSG00000079335.20	ENST00000370124.8	1873	11	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_7	5.56866231693034	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAATAAATATCAAGAAG	100351341	True	NA	NA	False	NA	NA	NA	100352501	100484734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_100353004_100353761_100353853_100377545_100377622_100390731_100390825_100424221_100424302_100439931_100439999_100442933_100442997_100455404_100455493_100462650_100462882_100467955_100468095_100484291
transcript_11368.known	chr1	+	991	4	FSM	ENSG00000079335.20	ENST00000646583.1	991	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	1.24721912892465	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAGTTATATAGGTATTT	100351348	True	NA	NA	False	NA	NA	NA	100352508	100391060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_100353004_100353761_100353853_100377545_100377622_100390731
transcript_113703.known	chr2	+	1256	7	FSM	ENSG00000138085.18	ENST00000380171.9	1227	7	-10	-19	-10	-2	multi-exon	FALSE	canonical	3	1664	junction_1	165.946527532214	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAAAGGCGCCCTGCCTT	27209216	True	NA	47	True	AATAAA	-35	NA	27212030	27217176	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27212468_27213176_27213299_27215320_27215393_27215473_27215546_27215631_27215754_27216522_27216621_27216843
transcript_113705.known	chr2	+	1059	7	FSM	ENSG00000138085.18	ENST00000405489.7	1059	7	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_1	610.948647596506	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAGGCGCCCTGCCTTTA	27203516	False	NA	49	True	AATAAA	-37	NA	27212369	27217178	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27212608_27213176_27213299_27215320_27215393_27215473_27215546_27215631_27215754_27216522_27216621_27216843
transcript_113710.known	chr2	+	7286	44	FSM	ENSG00000084774.14	ENST00000264705.9	7286	44	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_7	92.7286497681879	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGCTCTCTGAGTCCT	27206843	True	NA	5	True	NA	NA	NA	27217368	27243943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27217634_27217876_27218017_27221217_27221348_27222193_27222337_27222518_27222661_27222865_27223038_27223562_27223749_27223916_27224030_27224344_27224491_27224744_27224877_27225009_27225244_27225704_27225927_27226130_27226320_27226524_27226650_27226831_27226963_27231467_27231581_27231979_27232225_27232447_27232695_27233041_27233141_27233311_27233537_27233625_27233809_27234007_27234227_27234517_27234686_27235244_27235428_27235535_27235641_27236283_27236524_27236748_27236831_27237378_27237546_27237717_27237883_27238055_27238188_27238430_27238633_27239041_27239233_27239330_27239472_27239696_27239799_27240264_27240362_27240910_27240956_27241057_27241228_27241321_27241397_27241910_27242124_27242301_27242428_27242619_27242776_27242871_27242974_27243197_27243293_27243415
transcript_113718.known	chr2	-	2936	8	FSM	ENSG00000115194.11	ENST00000233535.9	2936	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	7.38448456189719	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAATCAAA	-27262458	True	NA	NA	False	NA	NA	NA	27263047	27253683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27255461_27256385_27256521_27256787_27256894_27257153_27257353_27257904_27258059_27258160_27258308_27258752_27258935_27262811
transcript_113723.known	chr2	+	2027	10	FSM	ENSG00000138100.14	ENST00000296098.4	2027	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	8.93322277432968	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCCCTGGTGGCTCTGCCC	27282450	False	NA	13	True	ATTAAA	-18	NA	27282461	27307439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27282900_27298566_27298740_27299244_27299417_27299529_27299656_27304958_27305055_27305583_27305818_27306079_27306103_27306212_27306338_27306455_27306543_27306886
transcript_113724.known	chr2	+	1930	9	FSM	ENSG00000138100.14	ENST00000380075.7	1930	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	4.4087980221371	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGTGCCCTGGTGGCTCT	27282417	True	NA	9	True	ATTAAA	-14	NA	27282428	27307435	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27282900_27298566_27298740_27299244_27299417_27304958_27305055_27305583_27305818_27306079_27306103_27306212_27306338_27306455_27306543_27306886
transcript_113732.known	chr2	-	905	8	FSM	ENSG00000115204.15	ENST00000426513.6	905	8	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_6	192.983873705043	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATATGGTGCCTCAGTA	-27317905	True	NA	-53	True	NA	NA	NA	27323083	27309539	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27309982_27311898_27311952_27312213_27312247_27312493_27312590_27312679_27312773_27312993_27313075_27322447_27322523_27323051
transcript_113734.known	chr2	-	1002	8	FSM	ENSG00000115204.15	ENST00000380044.6	1002	8	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_7	99.2995879309945	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCAGTGGTAATGAGTAA	-27317919	True	NA	-5	True	ATTAAA	-15	NA	27323097	27309491	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27309982_27311898_27311952_27312213_27312247_27312493_27312590_27312679_27312773_27312993_27313110_27322447_27322523_27323051
transcript_113735.known	chr2	-	859	8	FSM	ENSG00000115204.15	ENST00000405983.5	859	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	205.345701544632	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATCCCAGCAAATGCCAC	-27317885	True	NA	NA	False	CATAAA	-39	NA	27323063	27309645	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27309982_27311898_27311952_27312213_27312247_27312493_27312590_27312679_27312773_27312993_27313155_27322447_27322523_27323051
transcript_113738.known	chr2	-	665	8	FSM	ENSG00000115204.15	ENST00000403262.6	665	8	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	194.553491935996	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAGTGGCACTGAAGATGT	-27317889	True	NA	NA	False	AATAAA	-27	NA	27323067	27311494	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27311678_27311898_27311952_27312213_27312247_27312493_27312590_27312679_27312773_27312993_27313110_27322447_27322523_27323051
transcript_113740.known	chr2	-	896	7	FSM	ENSG00000115204.15	ENST00000621183.4	896	7	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_6	105.043906164148	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTCCTCAAAGTGGGCAT	-27317924	True	NA	NA	False	NA	NA	NA	27323102	27309849	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27309982_27311898_27311952_27312213_27312590_27312679_27312773_27312993_27313110_27322447_27322523_27323051
transcript_113747.known	chr2	-	590	2	FSM	ENSG00000115204.15	ENST00000494436.1	590	2	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGTTTAAATGGCATTAA	-27317899	True	NA	NA	False	NA	NA	NA	27323077	27321958	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27322523_27323051
transcript_113748.known	chr2	-	906	7	FSM	ENSG00000115204.15	ENST00000402310.5	906	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	195.197051434925	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCAGTGGTAATGAGTAA	-27317876	True	NA	-5	True	ATTAAA	-15	NA	27323054	27309491	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27309982_27312213_27312247_27312493_27312590_27312679_27312773_27312993_27313110_27322447_27322523_27323051
transcript_113749.known	chr2	-	998	7	FSM	ENSG00000115204.15	ENST00000233545.6	998	7	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_6	66.4897652942834	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCAGTGGTAATGAGTAA	-27322554	False	NA	-5	True	ATTAAA	-15	NA	27322564	27309491	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27309982_27311898_27311952_27312213_27312247_27312493_27312590_27312679_27312773_27312993_27313110_27322447
transcript_113761.nnic	chr2	-	3933	20	NNC	ENSG00000115207.14	novel	3882	19	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_19	119.778558377914	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTACACGTCATGATTTT	-27356993	False	NA	-7	True	ATTAAA	-24	NA	27357009	27325848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_27326894_27327176_27327285_27328036_27328190_27328467_27328597_27328843_27328932_27329120_27329283_27329378_27329524_27333654_27333785_27333973_27334000_27335597_27335707_27335916_27336029_27336197_27336426_27337243_27337343_27337480_27337559_27337925_27338021_27341947_27342234_27342825_27343148_27343307_27343579_27350313_27350390_27356738
transcript_113772.nnic	chr2	-	3540	20	NNC	ENSG00000115207.14	novel	3882	19	NA	NA	-62	-36	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_19	119.778558377914	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCACTTGTGAATGGGTG	NA	False	NA	-12	True	AGTAAA	-18	NA	27357096	27326328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_27326894_27327176_27327285_27328036_27328190_27328467_27328597_27328843_27328932_27329120_27329283_27329378_27329524_27333654_27333785_27333973_27334000_27335597_27335707_27335916_27336029_27336197_27336426_27337243_27337343_27337480_27337559_27337925_27338021_27341947_27342234_27342825_27343148_27343307_27343579_27350313_27350390_27356738
transcript_113776.known	chr2	-	3992	19	FSM	ENSG00000115207.14	ENST00000359541.6	3992	19	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_18	105.078923894916	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTACACGTCATGATTTT	-27356476	False	NA	-7	True	ATTAAA	-24	NA	27356492	27325848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27326894_27327176_27327285_27328036_27328190_27328467_27328597_27328843_27328932_27329120_27329283_27329378_27329524_27333654_27333785_27333973_27334000_27335597_27335707_27335916_27336029_27336197_27336426_27337243_27337343_27337480_27337559_27337925_27338021_27341947_27342234_27342825_27343148_27343307_27343579_27356086
transcript_113778.known	chr2	-	3882	19	FSM	ENSG00000115207.14	ENST00000264720.7	3882	19	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_18	58.9556225656109	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTACACGTCATGATTTT	-27357018	True	NA	-7	True	ATTAAA	-24	NA	27357034	27325848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27326894_27327176_27327285_27328036_27328190_27328467_27328597_27328843_27328932_27329120_27329283_27329378_27329524_27333654_27333785_27333973_27334000_27335597_27335707_27335916_27336029_27336197_27336426_27337243_27337343_27337480_27337559_27337925_27338021_27341947_27342234_27342825_27343148_27343307_27343579_27356738
transcript_113787.nic	chr2	-	3638	19	NIC	ENSG00000115207.14	novel	3882	19	NA	NA	-370	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	112.07190152358	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTATCTGCATGAAGGCTC	NA	False	NA	24	True	NA	NA	NA	27357404	27326292	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_27326724_27327176_27327285_27328036_27328190_27328467_27328597_27328843_27328932_27329120_27329283_27329378_27329524_27333654_27333785_27333973_27334000_27335597_27335707_27335916_27336029_27336197_27336426_27337243_27337343_27337480_27337559_27337925_27338021_27341947_27342234_27342825_27343148_27343307_27343579_27356738
transcript_113806.known	chr2	-	1771	14	NNC	ENSG00000115211.17	novel	1644	13	NA	NA	15	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	232.926328602442	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTCAGCAACTCTGCTGC	-27361660	True	NA	-11	True	AATAAA	-14	NA	27370300	27364362	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367803_27367804_27367823_27368024_27368140_27368371_27368464_27368653_27368734_27369005_27369213_27369413_27369550_27369875_27369920_27370105
transcript_113807.known	chr2	-	1754	14	NNC	ENSG00000115211.17	novel	1644	13	NA	NA	-119	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	234.693858250683	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTGCCTTTGTTTCTC	-27370439	False	NA	0	True	AATAAA	-25	NA	27370457	27364351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367823_27368024_27368140_27368371_27368464_27368653_27368734_27369005_27369210_27369413_27369546_27369875_27369892_27369893_27369920_27370283
transcript_113810.nic	chr2	-	2067	13	NNC	ENSG00000115207.14	novel	604	4	NA	NA	-2	2023	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	137.914425963671	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATATGCTTGTTTTTTGGT	-27356763	True	NA	-4	True	AATAAA	-32	NA	27357001	27333604	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_27333648_27333649_27333785_27333973_27334000_27335597_27335707_27335916_27336029_27336197_27336426_27337243_27337343_27337480_27337559_27337925_27338021_27341947_27342234_27342825_27343148_27343307_27343579_27356738
transcript_113813.known	chr2	-	1570	13	FSM	ENSG00000115211.17	ENST00000405940.6	1570	13	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_7	182.171222114435	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCATACTCCCTACCCTC	-27361675	True	NA	-25	True	NA	NA	NA	27370315	27364376	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367823_27368024_27368114_27368371_27368464_27368653_27368734_27369005_27369213_27369413_27369550_27369875_27369920_27370283
transcript_113814.known	chr2	-	1608	13	FSM	ENSG00000115211.17	ENST00000445933.6	1608	13	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_10	113.599687010523	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATGCCATACTCCCTAC	-27361694	True	NA	-29	True	NA	NA	NA	27370334	27364380	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367823_27368024_27368140_27368371_27368464_27368653_27368734_27369005_27369210_27369413_27369550_27369875_27369920_27370283
transcript_113815.known	chr2	-	1644	13	FSM	ENSG00000115211.17	ENST00000347454.9	1644	13	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_10	91.3665921804391	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTGCCTTTGTTTCTC	-27361698	True	NA	0	True	AATAAA	-25	NA	27370338	27364351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367823_27368024_27368140_27368371_27368464_27368653_27368734_27369005_27369213_27369413_27369550_27369875_27369920_27370283
transcript_11385.known	chr1	-	2835	5	FSM	ENSG00000162694.14	ENST00000370113.7	2835	5	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_4	99.9874992186523	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTCTGTGTTAACTAAG	-100891765	True	NA	-23	True	AATAAA	-19	NA	100894812	100872386	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_100874431_100876793_100876865_100877475_100877904_100888752_100888865_100894632
transcript_113855.known	chr2	+	536	2	FSM	ENSG00000234072.1	ENST00000453289.1	536	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATTTATAACCAATCTTT	27356093	True	NA	NA	False	NA	NA	NA	27357139	27358190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27357293_27357807
transcript_113857.known	chr2	-	1949	12	FSM	ENSG00000115211.17	ENST00000493344.6	1949	12	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_10	94.3593447964388	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGGAAACACAGGGTTAAT	-27361686	True	NA	-47	True	NA	NA	NA	27370326	27364398	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367823_27368024_27368140_27368371_27368464_27368653_27368734_27369005_27369213_27369413_27369550_27369875
transcript_113859.known	chr2	+	2007	16	FSM	ENSG00000115234.11	ENST00000427123.5	2007	16	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	377.221361478318	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTACCTCTGGTTCCCTCT	27361831	True	NA	16	True	ATTAAA	-16	NA	27370627	27377123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27370807_27371268_27371344_27372622_27372741_27373039_27373114_27373246_27373312_27373860_27373972_27374084_27374176_27374345_27374434_27374688_27374759_27375060_27375154_27375505_27375710_27375845_27375972_27376105_27376184_27376312_27376388_27376478_27376521_27376605
transcript_113867.known	chr2	+	2357	15	FSM	ENSG00000115234.11	ENST00000233575.7	2357	15	0	0	0	0	multi-exon	FALSE	canonical	3	1031	junction_6	51.1968988218973	2290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCTAGTTCAGGATGAGT	27361819	True	NA	NA	False	TATAAA	-14	NA	27370615	27377535	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27370807_27371268_27371344_27372622_27372741_27373246_27373312_27373860_27373972_27374084_27374176_27374345_27374434_27374688_27374759_27375060_27375154_27375505_27375710_27375845_27375972_27376105_27376184_27376312_27376388_27376478_27376521_27376605
transcript_113887.known	chr2	+	1955	14	FSM	ENSG00000115234.11	ENST00000440760.5	1955	14	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_2	304.108416513063	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGGTTCCCTCTCACT	27361820	True	NA	20	True	ATTAAA	-20	NA	27370616	27377127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27370807_27371268_27371469_27373246_27373312_27373860_27373972_27374084_27374176_27374345_27374434_27374688_27374759_27375060_27375154_27375505_27375710_27375845_27375972_27376105_27376184_27376312_27376388_27376478_27376521_27376605
transcript_113888.known	chr2	+	2400	14	FSM	ENSG00000115234.11	ENST00000537606.5	2400	14	0	0	0	0	multi-exon	TRUE	canonical	2	39	junction_1	294.927992415198	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGACCTAGTTCAGGATGA	27370485	False	NA	NA	False	TATAAA	-12	NA	27370495	27377533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27370807_27372622_27372741_27373246_27373312_27373860_27373972_27374084_27374176_27374345_27374434_27374688_27374759_27375060_27375154_27375505_27375710_27375845_27375972_27376105_27376184_27376312_27376388_27376478_27376521_27376605
transcript_113909.known	chr2	-	2144	4	FSM	ENSG00000163795.14	ENST00000323703.11	2144	4	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	26.2339898266013	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTCTATGCTGAATTG	-27379015	True	NA	-43	True	AATAAA	-16	NA	27380734	27377234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27378372_27378466_27379055_27380092_27380249_27380471
transcript_113911.known	chr2	-	2077	3	FSM	ENSG00000163795.14	ENST00000407879.1	2077	3	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	30.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTCTATGCTGAATTG	-27380308	False	1719	-43	True	AATAAA	-16	NA	27380444	27377234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27378372_27378466_27379055_27380092
transcript_113919.known	chr2	-	2210	10	FSM	ENSG00000115241.11	ENST00000344034.5	2210	10	0	0	0	0	multi-exon	FALSE	canonical	3	808	junction_6	60.0351748745868	1354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTACGCATCGTGTCCTTT	-27392543	True	NA	-6	True	ACTAAA	-14	NA	27409591	27381198	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27381806_27382125_27382229_27382475_27382606_27383365_27383601_27383951_27384093_27384672_27385089_27385746_27385880_27386193_27386280_27387088_27387159_27409302
transcript_11394.known	chr1	-	2825	5	FSM	ENSG00000162694.14	ENST00000370114.8	2825	5	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_4	42.5404219537136	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTGTTCTGTGTTAAC	-100891795	True	NA	-27	True	AATAAA	-15	NA	100894842	100872390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_100874431_100876793_100876865_100877475_100877904_100888752_100888829_100894632
transcript_113946.nic	chr2	-	1191	6	ISM	ENSG00000115241.11	ENST00000344034.5	2210	10	-104	2801	-104	2596	5prime_fragment	FALSE	canonical	3	808	junction_2	53.4662510374535	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAAGAGATGAT	NA	False	NA	-10	True	NA	NA	NA	27409695	27383999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_27384093_27384672_27385089_27385746_27385880_27386193_27386280_27387088_27387159_27409302
transcript_113950.nic	chr2	-	663	4	ISM	ENSG00000115241.11	ENST00000344034.5	2210	10	-104	4567	-104	830	5prime_fragment	FALSE	canonical	3	818	junction_3	18.4932420089069	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGCTGATGAAGATGATGG	NA	False	NA	18	True	AAAAAG	-6	NA	27409695	27385765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_27385880_27386193_27386280_27387088_27387159_27409302
transcript_113952.known	chr2	+	2887	19	FSM	ENSG00000115216.14	ENST00000233557.7	2887	19	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	294.734767771523	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTCGTGTGTTCGCGCCTT	NA	False	NA	29	True	AATAAA	-20	NA	27427789	27442259	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27428183_27428317_27428732_27433248_27433484_27433672_27433796_27433988_27434091_27434470_27434561_27434721_27434763_27435132_27435228_27436752_27436837_27437046_27437106_27437261_27437361_27439765_27439899_27440402_27440509_27440651_27440703_27440804_27440941_27441126_27441181_27441266_27441331_27441566_27441623_27441707
transcript_113954.known	chr2	+	2174	19	FSM	ENSG00000115216.14	ENST00000379863.7	2174	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	450.919088852266	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCGTCGTGTGTTCGCG	27410638	True	NA	25	True	AATAAA	-16	NA	27428652	27442255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27428732_27433253_27433484_27433672_27433796_27433988_27434091_27434470_27434561_27434721_27434763_27435132_27435228_27435722_27435747_27436752_27436837_27437046_27437106_27437261_27437361_27439765_27439899_27440402_27440509_27440651_27440703_27440804_27440941_27441126_27441181_27441266_27441331_27441566_27441623_27441707
transcript_113958.known	chr2	+	2176	18	FSM	ENSG00000115216.14	ENST00000379852.8	2176	18	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_1	255.705374903081	2115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTCGTGTGTTCGCGCCTT	27410616	True	NA	29	True	AATAAA	-20	NA	27428630	27442259	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27428732_27433253_27433484_27433672_27433796_27433988_27434091_27434470_27434561_27434721_27434763_27435132_27435228_27436752_27436837_27437046_27437106_27437261_27437361_27439765_27439899_27440402_27440509_27440651_27440703_27440804_27440941_27441126_27441181_27441266_27441331_27441566_27441623_27441707
transcript_11398.known	chr1	+	7898	12	FSM	ENSG00000162695.12	ENST00000370112.8	7898	12	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_11	13.8157892665548	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACCTGAATTGTGTCTTA	100893151	True	NA	8	True	AATAAA	-18	NA	100896075	100981753	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_100896343_100896569_100896672_100906851_100906966_100911062_100911151_100912111_100912239_100913662_100913807_100918076_100918128_100921705_100921842_100961827_100961919_100965768_100965919_100974809_100974903_100975218
transcript_113983.known	chr2	-	5395	48	FSM	ENSG00000138002.16	ENST00000260570.8	5395	48	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_32	14.6686659268125	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGACCACTGTATTCTTT	-27488472	True	NA	-13	True	ATTAAA	-14	NA	27489743	27444376	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27444522_27445013_27445106_27445295_27445450_27445744_27445844_27445928_27445989_27446259_27446356_27447514_27447635_27447811_27447923_27448914_27449032_27449293_27449381_27449498_27449563_27449690_27449801_27449997_27450097_27453383_27453514_27453629_27453740_27453981_27454163_27454353_27454419_27454566_27454661_27456510_27456654_27457638_27457756_27457840_27457977_27458125_27458224_27458778_27458869_27459377_27459523_27459708_27459830_27461014_27461094_27461268_27461518_27461758_27461837_27462700_27462794_27463096_27463182_27465410_27465519_27465745_27465883_27470927_27471096_27472249_27472363_27476640_27476727_27477216_27477321_27477558_27477613_27477994_27478157_27479508_27479605_27480025_27480150_27481045_27481261_27483288_27483377_27483579_27483660_27483871_27483938_27484226_27484267_27485017_27485131_27485359_27485504_27489614
transcript_113989.known	chr2	-	2207	15	FSM	ENSG00000138002.16	ENST00000359466.10	2207	15	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_8	6.70668262531743	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTGTCTCTTACTATTC	-27488502	True	NA	NA	False	NA	NA	NA	27489773	27471686	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27472363_27476640_27476727_27477216_27477321_27477558_27477613_27477994_27478157_27479508_27479605_27480025_27480150_27481045_27481261_27483288_27483377_27483579_27483660_27483871_27483938_27484226_27484267_27485017_27485131_27485359_27485504_27489614
transcript_113997.known	chr2	+	872	7	FSM	ENSG00000157992.12	ENST00000288873.7	872	7	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_6	123.022694383326	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTATGATTCCTTTTG	27438692	True	NA	21	True	AATAAA	-21	NA	27442380	27444297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27442441_27442578_27442764_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444185
transcript_113998.nic	chr2	+	900	7	NIC	ENSG00000157992.12	novel	872	7	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	164	junction_6	140.382809963803	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGATTATGATTCCTTT	27438659	True	NA	19	True	AATAAA	-19	NA	27442347	27444295	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_27442441_27442578_27442764_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444188
transcript_113999.known	chr2	+	956	7	FSM	ENSG00000157992.12	ENST00000543753.5	956	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	185.200791934952	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTCTGGGTCTTAGTTT	27438677	True	NA	5	True	ATTAAA	-18	NA	27442365	27446481	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27442441_27442578_27442764_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27446300
transcript_114001.nic	chr2	+	1023	6	ISM	ENSG00000157992.12	ENST00000288873.7	872	7	-33	6	-18	0	intron_retention	FALSE	canonical	3	291	junction_1	96.7479198742795	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTACTTGATTATGATTC	27438659	True	NA	15	True	AATAAA	-15	NA	27442347	27444291	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_27442441_27442578_27442764_27442841_27442902_27443073_27443281_27443397_27443533_27443948
transcript_114004.nic	chr2	+	983	6	NIC	ENSG00000157992.12	novel	872	7	NA	NA	-18	0	intron_retention	FALSE	canonical	3	227	junction_5	134.737671050082	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTATGATTCCTTTTG	27438659	True	NA	21	True	AATAAA	-21	NA	27442347	27444297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_27442441_27442578_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444185
transcript_114005.nic	chr2	+	978	6	NIC	ENSG00000157992.12	novel	665	6	NA	NA	-18	0	intron_retention	FALSE	canonical	3	164	junction_5	153.762153991156	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGATTATGATTCCTTT	27438659	True	NA	19	True	AATAAA	-19	NA	27442347	27444295	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_27442441_27442578_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444188
transcript_114007.known	chr2	+	665	6	FSM	ENSG00000157992.12	ENST00000453171.5	665	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	214.791619948265	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGATTATGATTCCTTT	27438709	True	NA	19	True	AATAAA	-19	NA	27442397	27444295	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27442441_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444188
transcript_114024.known	chr2	+	942	6	FSM	ENSG00000157992.12	ENST00000407293.5	942	6	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_5	142.700525577168	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTATGATTCCTTTTG	27438757	True	NA	21	True	AATAAA	-21	NA	27442445	27444297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27442764_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444188
transcript_114025.known	chr2	-	1612	7	FSM	ENSG00000115226.10	ENST00000264703.4	1612	7	0	0	0	0	multi-exon	TRUE	canonical	3	153	junction_5	4.52462398683274	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGACTGTATAGTATGCTG	-27494478	True	NA	-4	True	AATAAA	-20	NA	27495200	27491882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27492479_27492665_27492791_27493388_27493479_27493929_27494135_27494350_27494467_27494546_27494704_27494877
transcript_114028.nic	chr2	-	1493	6	NIC	ENSG00000115226.10	novel	1612	7	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	58.7789077816184	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTTGGACAAACTGGAGC	-27494502	True	NA	-22	True	AATAAA	-2	NA	27495224	27491900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_27492479_27493388_27493479_27493929_27494135_27494350_27494467_27494546_27494704_27494877
transcript_114031.known	chr2	+	3531	14	FSM	ENSG00000243943.10	ENST00000355467.6	3531	14	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	46.2761200830496	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGGTTCATGAATTAT	27578525	True	NA	9	True	AATAAA	-25	NA	27583041	27623217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27583143_27583657_27583717_27598066_27598255_27599582_27599679_27599969_27600054_27600690_27600816_27601355_27601443_27602462_27602562_27603139_27603308_27607844_27608040_27615167_27615270_27616261_27616325_27617472_27617572_27621152
transcript_114032.known	chr2	+	2445	14	FSM	ENSG00000198522.14	ENST00000610189.2	2445	14	0	0	0	0	multi-exon	FALSE	canonical	3	650	junction_11	63.1183728725863	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTTTAATGTTCTATAC	27619311	True	NA	10	True	AATAAA	-20	NA	27629049	27651511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27629170_27629858_27629953_27631026_27631067_27631833_27631901_27632632_27632671_27634845_27634925_27635139_27635235_27638209_27638256_27638884_27639032_27640042_27640126_27641239_27641280_27642428_27642520_27647835_27647944_27650114
transcript_114036.known	chr2	+	2544	14	FSM	ENSG00000163798.13	ENST00000618046.4	2544	14	0	0	0	0	multi-exon	FALSE	canonical	2	165	junction_6	37.661211662735	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAATATTTTATTTTATT	27661200	True	NA	12	True	ATTAAA	-19	NA	27663888	27694972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27664578_27665099_27665296_27667267_27667391_27668842_27668904_27669247_27669388_27675531_27675693_27677294_27677365_27677737_27677925_27682247_27682360_27685036_27685278_27687933_27688021_27688699_27688768_27693684_27693755_27694633
transcript_114040.known	chr2	+	3543	13	FSM	ENSG00000243943.10	ENST00000556601.5	3543	13	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	40.271991921599	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTGGTTCATGAATT	27578452	True	NA	7	True	AATAAA	-23	NA	27582968	27623215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27583143_27598066_27598255_27599582_27599679_27599969_27600054_27600690_27600816_27601355_27601443_27602462_27602562_27603139_27603308_27607844_27608040_27615167_27615270_27616261_27616325_27617472_27617572_27621152
transcript_114044.known	chr2	+	3515	13	FSM	ENSG00000243943.10	ENST00000416005.6	3515	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	81.8322725661052	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTGGTTCATGAATT	27578452	True	NA	7	True	AATAAA	-23	NA	27582968	27623215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27583143_27583657_27583717_27598069_27598255_27599582_27599679_27600690_27600816_27601355_27601443_27602462_27602562_27603139_27603308_27607844_27608040_27615167_27615270_27616261_27616325_27617472_27617572_27621152
transcript_11405.known	chr1	+	8204	11	FSM	ENSG00000162695.12	ENST00000357650.9	8204	11	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_4	9.92975326984513	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAATTGTGTCTTATCAG	100893165	True	NA	12	True	AATAAA	-22	NA	100896089	100981757	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_100896343_100896569_100896672_100906851_100906966_100911062_100911151_100912111_100912239_100913662_100913807_100918076_100918128_100921705_100921842_100961827_100961919_100965768_100965919_100974809
transcript_114054.nic	chr2	+	1691	12	NIC	ENSG00000198522.14	novel	1832	14	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	66	junction_2	209.5145905095	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTGTTCTAAGACTGCT	27619291	True	NA	26	True	GATAAA	-15	NA	27629029	27650844	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_27629170_27629858_27629953_27632632_27632671_27634845_27634925_27635139_27635235_27638209_27638256_27638884_27639032_27640042_27640126_27641239_27641280_27642428_27642520_27647835_27647944_27650114
transcript_114055.nic	chr2	+	2359	12	NIC	ENSG00000198522.14	novel	2496	14	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	66	junction_2	209.5145905095	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTAATTTTAATGTTCTA	27619287	True	NA	7	True	AATAAA	-17	NA	27629025	27651508	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_27629170_27629858_27629953_27632632_27632671_27634845_27634925_27635139_27635235_27638209_27638256_27638884_27639032_27640042_27640126_27641239_27641280_27642428_27642520_27647835_27647944_27650114
transcript_114056.nic	chr2	+	2308	10	ISM	ENSG00000163798.13	ENST00000326019.10	2959	14	-44	9826	-44	7846	5prime_fragment	FALSE	canonical	2	165	junction_6	32.1212978843909	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAGGAGCATGAAAAGAAAA	27663359	True	NA	27	True	AAGAAA	-2	NA	27663426	27685143	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_27664578_27665099_27665296_27667267_27667391_27668842_27668904_27669247_27669388_27675531_27675693_27677294_27677365_27677737_27677925_27682247_27682360_27685036
transcript_114064.known	chr2	-	4296	6	FSM	ENSG00000119760.16	ENST00000337768.10	4296	6	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_4	36.5918023606381	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATTCTGATTCATTAAT	-27660750	True	NA	-17	True	ATTAAA	-28	NA	27663614	27650808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27653748_27655364_27655603_27657344_27657670_27660983_27661389_27662178_27662282_27663328
transcript_114067.known	chr2	-	2280	6	FSM	ENSG00000119760.16	ENST00000405491.5	2280	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	65.9047797963092	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGTTTTCATTTAACTT	-27660775	True	NA	-15	True	AATATA	-14	NA	27663639	27653062	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27653748_27655364_27655603_27657344_27657670_27660983_27661602_27662178_27662282_27663328
transcript_114071.nic	chr2	+	1598	5	ISM	ENSG00000163798.13	ENST00000326019.10	2959	14	-44	25655	-44	-6378	5prime_fragment	FALSE	canonical	3	236	junction_1	10.0747208398049	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCAATGATCCAGTGCTC	27663359	True	NA	NA	False	AAGAAA	-4	NA	27663426	27669314	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_27664578_27665099_27665296_27667267_27667391_27668842_27668904_27669247
transcript_114072.known	chr2	-	2869	5	FSM	ENSG00000119760.16	ENST00000406540.5	2869	5	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_4	24.3567239176372	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAACTTGATTCATTTTT	-27660776	True	NA	-4	True	AATATA	-25	NA	27663640	27653051	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27653748_27655364_27655603_27657344_27657670_27660983_27662282_27663328
transcript_114073.known	chr2	-	4114	5	FSM	ENSG00000119760.16	ENST00000404798.6	4114	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	80.6826344388927	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGGATTCTGATTCATT	-27663821	False	NA	-20	True	ATTAAA	-25	NA	27663840	27650811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27653748_27655364_27655603_27657344_27657670_27662178_27662282_27663328
transcript_114075.nic	chr2	+	1182	3	ISM	ENSG00000163798.13	ENST00000427424.1	906	7	-756	8306	-178	-8306	5prime_fragment	FALSE	canonical	3	236	junction_1	8	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGTATGTAAACAGATTC	27663692	False	NA	NA	False	TATAAA	-38	NA	27663710	27667386	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_27664578_27665099_27665296_27667267
transcript_114077.known	chr2	-	2343	2	FSM	ENSG00000176714.10	ENST00000324364.4	2343	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGTTCCAATGTAACAC	-27628824	True	NA	1	True	AATAAA	-22	NA	27629012	27625637	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27627918_27628949
transcript_114082.known	chr2	+	587	4	FSM	ENSG00000243147.8	ENST00000476552.1	587	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	438.317236713319	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTTTATAGCCCTTAAT	27772028	False	NA	-25	True	NA	NA	NA	27772189	27779697	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27772386_27772673_27772693_27774423_27774531_27779432
transcript_114084.known	chr2	+	729	3	FSM	ENSG00000243147.8	ENST00000483992.5	729	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	636.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTGTGCTATTGTGTCT	27771813	True	NA	9	True	AATAAA	-12	NA	27771974	27779731	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27772386_27772673_27772693_27779432
transcript_114085.known	chr2	+	404	3	FSM	ENSG00000243147.8	ENST00000379666.7	404	3	0	0	0	0	multi-exon	FALSE	canonical	3	1303	junction_2	408	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTATTGTGTCTTAG	27762455	True	NA	12	True	AATAAA	-15	NA	27771716	27779734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27771800_27772673_27772693_27779432
transcript_114086.known	chr2	+	508	4	FSM	ENSG00000243147.8	ENST00000296102.8	508	4	0	0	0	0	multi-exon	FALSE	canonical	3	930	junction_3	547.559636528804	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGCTATTGTGTCTTA	27762457	True	NA	11	True	AATAAA	-14	NA	27771718	27779733	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27771800_27772673_27772693_27774423_27774531_27779432
transcript_114087.known	chr2	-	1247	8	FSM	ENSG00000171174.15	ENST00000302188.8	1247	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	3.614031611621	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAGTAACCTCAATTGTC	-27890139	True	NA	NA	False	ATTAAA	-33	NA	27890387	27781378	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_27781789_27827566_27827756_27832685_27832778_27843066_27843232_27847041_27847105_27848033_27848098_27858438_27858572_27890256
transcript_114090.known	chr2	+	1686	13	FSM	ENSG00000158019.21	ENST00000361704.6	1686	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_11	71.4288204360739	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGTCTTCCCTCTGTGC	27888288	True	NA	21	True	ATTAAA	-27	NA	27890792	28338901	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27890843_27894532_27894685_27929831_27929909_27987992_27988088_28025225_28025421_28045724_28045800_28129270_28129381_28237201_28237302_28241322_28241394_28244779_28244863_28298337_28298492_28310081_28310154_28338449
transcript_114092.known	chr2	+	1852	13	FSM	ENSG00000158019.21	ENST00000344773.6	1852	13	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_12	70.515955641259	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGTCTTCCCTCTGTGC	27888224	True	NA	21	True	ATTAAA	-27	NA	27890728	28338901	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27890843_27894532_27894685_27929831_27929909_27987992_27988088_28025225_28025421_28045724_28045800_28129270_28129381_28237201_28237302_28241322_28241394_28244779_28244863_28298337_28298492_28327273_28327448_28338449
transcript_114093.known	chr2	+	1681	13	FSM	ENSG00000158019.21	ENST00000342045.6	1681	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	69.6987067471285	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGTCTTCCCTCTGTGC	27888287	True	NA	21	True	ATTAAA	-27	NA	27890791	28338901	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27890843_27892382_27892449_27894532_27894685_27929831_27929909_27987992_27988088_28025225_28025421_28045724_28045800_28129270_28129381_28237201_28237302_28241322_28241394_28244779_28244863_28298337_28298492_28338449
transcript_114094.known	chr2	+	1678	12	FSM	ENSG00000158019.21	ENST00000379624.6	1678	12	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_11	15.7967461865615	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGTCTTCCCTCTGTGC	27888224	True	NA	21	True	ATTAAA	-27	NA	27890728	28338901	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_27890843_27894532_27894685_27929831_27929909_27987992_27988088_28025225_28025421_28045724_28045800_28129270_28129381_28237201_28237302_28241322_28241394_28244779_28244863_28298337_28298492_28338449
transcript_11410.known	chr1	-	2159	9	FSM	ENSG00000117543.22	ENST00000370105.7	2159	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	155.893994432114	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTATAATTTTCTTCT	-101021456	True	NA	3	True	AATAAA	-23	NA	101025762	100989622	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_100990632_100992636_100992741_100995109_100995150_101001466_101001588_101013709_101013819_101021640_101021766_101022934_101023330_101025308_101025467_101025664
transcript_114100.known	chr2	+	6713	4	FSM	ENSG00000075426.12	ENST00000264716.9	6713	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	1.24721912892465	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGATGGTTGGTTTATTCT	28392482	True	NA	10	True	AATAAA	-22	NA	28392857	28417317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_28393823_28404106_28404359_28408758_28408867_28411929
transcript_114102.known	chr2	+	4771	9	FSM	ENSG00000213639.10	ENST00000358506.6	4771	9	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	99.070366406913	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAATGACCATAAATCT	28732699	True	NA	11	True	ATTAAA	-11	NA	28751747	28802930	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_28751821_28752037_28752177_28776850_28776983_28778808_28779040_28781737_28781843_28783906_28783979_28788657_28788810_28793862_28793998_28799198
transcript_114104.known	chr2	+	3527	9	FSM	ENSG00000213639.10	ENST00000296122.10	3527	9	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	144.976722269473	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGATTCTGTAATTCC	28732765	True	NA	20	True	AATAAA	-21	NA	28751813	28801648	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_28751925_28752037_28752177_28776850_28776983_28778808_28779040_28781737_28781843_28783906_28783979_28788657_28788810_28793862_28793998_28799198
transcript_114108.known	chr2	+	4916	8	FSM	ENSG00000213639.10	ENST00000395366.3	4916	8	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_2	65.616697725565	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATAAATCTTTGCTTCTTT	28732781	True	NA	21	True	ATTAAA	-21	NA	28751829	28802940	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_28752177_28776850_28776983_28778808_28779040_28781737_28781843_28783906_28783979_28788657_28788810_28793862_28793998_28799198
transcript_114116.known	chr2	-	1844	7	FSM	ENSG00000171103.11	ENST00000306108.10	1844	7	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_5	32.3715409992584	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTATCTGTCCATTT	-28867358	True	NA	NA	False	AATAAA	-20	NA	28870309	28849820	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_28850243_28850327_28850406_28851071_28851299_28852407_28852500_28861117_28861309_28865016_28865120_28869578
transcript_114117.nic	chr2	-	1821	7	NIC	ENSG00000171103.11	novel	1844	7	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_2	86.5917945817552	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTATCTGTCCATTT	-28867362	True	NA	NA	False	AATAAA	-20	NA	28870313	28849820	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_28850243_28850327_28850406_28851098_28851299_28852407_28852500_28861117_28861309_28865016_28865120_28869578
transcript_11412.known	chr1	-	1034	8	FSM	ENSG00000117543.22	ENST00000488176.1	1034	8	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_7	105.102476717939	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGTTTGGATGTATCCC	-101021461	True	NA	NA	False	NA	NA	NA	101025767	100990357	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_100990632_100992636_100992741_100995109_100995150_101001466_101001588_101013709_101013819_101021640_101021766_101025308_101025467_101025664
transcript_114120.nnic	chr2	+	2760	6	NIC	ENSG00000213639.10	novel	4916	8	NA	NA	-18	-611	intron_retention	FALSE	canonical	3	230	junction_5	107.689553810943	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAAGCCTGACTGATTTT	28732747	True	NA	21	True	AGTAAA	-15	NA	28751795	28801037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_28752177_28776850_28776983_28778808_28779040_28781737_28781843_28783906_28783979_28799198
transcript_114128.nnic	chr2	+	2261	5	NNC	ENSG00000213639.10	novel	4771	9	NA	NA	9	-611	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	204.731989439853	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAAGCCTGACTGATTTT	28751573	False	NA	21	True	AGTAAA	-15	NA	28751648	28801037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_28751821_28752037_28752177_28781803_28781843_28783906_28783979_28799198
transcript_114135.nnic	chr2	+	2316	4	NNC	ENSG00000213639.10	novel	4916	8	NA	NA	-3	-611	intron_retention	FALSE	canonical	0	0	junction_1	231.984194863932	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAAGCCTGACTGATTTT	28732762	True	NA	21	True	AGTAAA	-15	NA	28751810	28801037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_28752177_28781803_28781843_28783906_28783979_28799198
transcript_114136.nnic	chr2	+	4216	4	NNC	ENSG00000213639.10	novel	4916	8	NA	NA	-3	-3	intron_retention	FALSE	canonical	0	0	junction_1	231.984194863932	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCATAAATCTTTGCTTC	28732762	True	NA	18	True	ATTAAA	-18	NA	28751810	28802937	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_28752177_28781803_28781843_28783906_28783979_28799198
transcript_114141.known	chr2	+	3506	18	FSM	ENSG00000163811.12	ENST00000407426.8	3506	18	0	0	0	0	multi-exon	FALSE	canonical	3	576	junction_7	73.0430029285257	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTGTCTTGTGGTATAT	28884369	True	NA	17	True	AATAAA	-17	NA	28894666	28948219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_28894924_28901986_28902125_28906459_28906582_28912589_28912711_28914068_28914209_28917892_28917996_28922918_28922984_28924981_28925154_28926467_28926555_28927568_28927701_28929578_28929711_28935520_28935608_28936921_28936954_28937930_28937995_28941460_28941575_28942311_28942382_28946449_28946500_28946599
transcript_114151.nic	chr2	+	1424	11	ISM	ENSG00000163811.12	ENST00000407426.8	3506	18	-36	18590	-36	3144	5prime_fragment	FALSE	canonical	3	576	junction_7	65.3020673485917	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGGAAGACCTCCAGAC	28884333	True	NA	NA	False	NA	NA	NA	28894630	28929629	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_28894924_28901986_28902125_28906459_28906582_28912589_28912711_28914068_28914209_28917892_28917996_28922918_28922984_28924981_28925154_28926467_28926555_28927568_28927701_28929578
transcript_114156.nic	chr2	+	315	2	ISM	ENSG00000163811.12	ENST00000407426.8	3506	18	-36	46211	-36	-96	5prime_fragment	FALSE	canonical	3	772	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATCAGAAGCTGTAGGA	28884333	True	NA	NA	False	AAAACA	-43	NA	28894630	28902008	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_28894924_28901986
transcript_114157.nic	chr2	+	425	2	ISM	ENSG00000163811.12	ENST00000407426.8	3506	18	-36	46101	-36	14	5prime_fragment	FALSE	canonical	3	772	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATAGTAAGTGTGTGTAT	28884333	True	NA	NA	False	AGTAAA	-20	NA	28894630	28902118	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_28894924_28901986
transcript_114165.known	chr2	+	2560	5	FSM	ENSG00000119801.13	ENST00000379520.7	2560	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	68.9021044671351	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGCAGTACTGCTGCTT	30144774	True	NA	9	True	AATAAA	-18	NA	30146940	30160533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_30147063_30148244_30148542_30155849_30155911_30156627_30156793_30158618
transcript_114167.known	chr2	+	2197	4	FSM	ENSG00000119801.13	ENST00000402003.7	2197	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	78.1636459970718	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGCAGTACTGCTGCTT	30144840	True	NA	9	True	AATAAA	-18	NA	30147006	30160533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_30147063_30148244_30148306_30156627_30156793_30158618
transcript_114168.known	chr2	+	2499	4	FSM	ENSG00000119801.13	ENST00000379519.7	2499	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	64.9632374672185	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGCAGTACTGCTGCTT	30144774	True	NA	9	True	AATAAA	-18	NA	30146940	30160533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_30147063_30148244_30148542_30156627_30156793_30158618
transcript_114170.nnic	chr2	+	2287	4	NIC	ENSG00000119801.13	novel	2560	5	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_1	80.8386596183342	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGCAGTACTGCTGCTT	30144750	True	NA	9	True	AATAAA	-18	NA	30146916	30160533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_30147063_30155849_30155911_30156627_30156793_30158618
transcript_114171.known	chr2	+	2136	3	FSM	ENSG00000119801.13	ENST00000261353.9	2136	3	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	17.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGCAGTACTGCTGCTT	30144840	True	NA	9	True	AATAAA	-18	NA	30147006	30160533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_30147063_30156627_30156793_30158618
transcript_114173.known	chr2	+	653	3	FSM	ENSG00000119801.13	ENST00000470120.5	653	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	93	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTAAGATGGAACCTTTCT	30147876	True	NA	NA	False	AATGAA	-24	NA	30147951	30158966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_30148092_30156627_30156793_30158618
transcript_114175.known	chr2	+	559	3	FSM	ENSG00000213626.13	ENST00000406087.5	559	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	120.5	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTTCCTGAACTGTGT	30225050	True	NA	NA	False	AATAAA	-45	NA	30231536	30257656	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_30231765_30234404_30234512_30257432
transcript_114176.known	chr2	+	485	3	FSM	ENSG00000213626.13	ENST00000401506.1	485	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	123.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGAGTTGGTTTTCTTTTC	30232069	True	NA	NA	False	NA	NA	NA	30232152	30257760	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_30232207_30234404_30234508_30257432
transcript_114177.known	chr2	+	1689	3	FSM	ENSG00000213626.13	ENST00000467242.1	1689	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	118	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAAATACATGTTT	30232073	True	NA	NA	False	AAGAAA	-14	NA	30232156	30258040	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_30233135_30234404_30234508_30257432
transcript_114179.known	chr2	+	756	3	FSM	ENSG00000213626.13	ENST00000407930.2	756	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	118.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTTTTTCCCATCATGA	30232096	True	NA	NA	False	NA	NA	NA	30232179	30257670	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_30232595_30234404_30234508_30257432
transcript_114185.known	chr2	+	4879	6	FSM	ENSG00000172954.14	ENST00000379509.8	4879	6	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_4	14.2070405081424	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTGTTACGTTCTGTT	30444780	True	NA	13	True	AATAAA	-21	NA	30447245	30644225	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_30447384_30525586_30525756_30533115_30533315_30562145_30562293_30568059_30568177_30640116
transcript_11419.known	chr1	-	894	7	FSM	ENSG00000117543.22	ENST00000498372.5	894	7	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	145.617936166302	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTCTCATCTTGAATTTT	-101021449	True	NA	NA	False	NA	NA	NA	101025755	100990333	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_100990632_100992636_100992741_100995109_100995150_101001466_101001545_101021640_101021766_101025308_101025467_101025664
transcript_114192.known	chr2	+	583	4	FSM	ENSG00000172954.14	ENST00000466477.5	583	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	67.1830004953303	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGTCATAAAATTACCT	30444760	True	NA	NA	False	NA	NA	NA	30447225	30552549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_30447384_30525586_30525756_30533115_30533315_30552492
transcript_114193.known	chr2	+	5060	7	FSM	ENSG00000172954.14	ENST00000309052.8	5060	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	62.2345473904076	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTGTTACGTTCTGTT	30444791	True	NA	13	True	AATAAA	-21	NA	30447256	30644225	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_30447405_30459551_30459723_30525586_30525756_30533115_30533315_30562145_30562293_30568059_30568177_30640116
transcript_114199.known	chr2	-	2447	15	FSM	ENSG00000158089.15	ENST00000349752.10	2447	15	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_7	7.06276525599035	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCTTGCTCTTTTCTTC	-31138088	True	NA	-1	True	AATAAA	-26	NA	31138440	30910466	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_30911060_30912222_30912343_30924118_30924264_30924739_30924824_30929394_30929488_30932067_30932195_30942200_30942305_30944857_30944943_30945782_30945871_30955617_30955740_30955911_30955978_30958396_30958465_30966203_30966303_30992837_30993008_31137957
transcript_114207.known	chr2	+	4825	6	FSM	ENSG00000013016.16	ENST00000322054.10	4825	6	0	0	0	0	multi-exon	TRUE	canonical	3	82	junction_1	9.3893556754444	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGGAGGAGGGGCACACA	31233095	True	NA	27	True	AATAAA	-21	NA	31234151	31269451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_31234849_31244273_31244451_31249370_31249469_31260509_31260923_31261548_31261714_31266176
transcript_114213.known	chr2	-	1516	10	FSM	ENSG00000162959.14	ENST00000404530.6	1516	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_9	72.5580227588009	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTGATTTAAACTTATT	-32010995	False	NA	NA	False	AATAAA	-19	NA	32011008	31867822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_31868493_31869847_31869953_31883385_31883463_31891991_31892135_31917925_31918038_31920797_31920911_31932066_31932136_31943301_31943384_32010186_32010265_32010941
transcript_114217.known	chr2	-	4505	9	FSM	ENSG00000162959.14	ENST00000295065.9	4505	9	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_4	33.0529877620768	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGCTTCTTTATTAT	-32010544	False	NA	NA	False	TATAAA	-22	NA	32010557	31865059	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_31868493_31869847_31869953_31883385_31883463_31891991_31892135_31917925_31918038_31920797_31920911_31932066_31932136_31943301_31943384_32010186
transcript_114225.known	chr2	-	1336	8	FSM	ENSG00000162959.14	ENST00000426310.6	1336	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	81.4220548770919	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAAAGGTGGAAGCTT	-32010362	False	NA	NA	False	NA	NA	NA	32010375	31867977	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_31868493_31869847_31869953_31883385_31883463_31891991_31892135_31917925_31918038_31920797_31920911_31943301_31943384_32010186
transcript_114228.nic	chr2	-	1747	8	NIC	ENSG00000162959.14	novel	1516	10	NA	NA	-82	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	84.4731571904015	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTGATTTAAACTTATT	-32010376	True	NA	NA	False	AATAAA	-19	NA	32010639	31867822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_31868493_31869847_31869953_31891991_31892135_31917925_31918038_31920797_31920911_31932066_31932136_31943301_31943384_32010186
transcript_114237.known	chr2	-	637	7	FSM	ENSG00000162961.14	ENST00000452582.5	637	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	802.208548667711	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGGGTCTCCTATGTTC	-32019635	True	NA	-23	True	AATAAA	-11	NA	32039754	32011885	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_32012053_32023421_32023475_32023676_32023809_32029593_32029737_32039278_32039327_32039420_32039493_32039732
transcript_114243.known	chr2	-	523	6	FSM	ENSG00000162961.14	ENST00000414013.5	523	6	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	776.395260160699	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAATAAAAAATTCATA	-32019674	True	NA	-44	True	NA	NA	NA	32039793	32011906	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_32012053_32023421_32023475_32029593_32029737_32039278_32039327_32039420_32039493_32039732
transcript_114248.known	chr2	-	631	5	FSM	ENSG00000162961.14	ENST00000295066.3	631	5	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_4	692.873184644925	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTTTGGATGTATAAGA	-32019686	True	NA	-148	True	NA	NA	NA	32039805	32024101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_32024257_32029593_32029737_32039278_32039327_32039420_32039493_32039592
transcript_114249.known	chr2	-	688	5	FSM	ENSG00000162961.14	ENST00000342166.10	688	5	0	0	0	0	multi-exon	FALSE	canonical	3	1364	junction_4	171.680480835767	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTAAAGTAGTTTTTG	-32019686	True	NA	-31	True	AATAAA	-15	NA	32039805	32023904	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_32024257_32029593_32029737_32039278_32039327_32039420_32039493_32039732
transcript_114253.known	chr2	+	5268	17	FSM	ENSG00000021574.13	ENST00000315285.9	5268	17	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	20.2553040892997	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTCTTTACTTTTTTAC	32063531	True	NA	15	True	AATAAA	-13	NA	32063555	32157637	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_32064247_32087491_32087579_32089521_32089606_32098795_32098892_32114637_32114826_32115701_32115836_32116118_32116213_32126947_32127023_32128407_32128480_32136562_32136639_32136876_32136969_32137108_32137189_32141903_32141947_32143335_32143416_32144936_32145008_32147217_32147259_32154373
transcript_114256.known	chr2	-	712	1	FSM	ENSG00000272716.1	ENST00000608489.1	712	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATATGTAGCACGTGTG	-32165550	True	NA	NA	False	ATTAAA	-16	NA	32165757	32165045	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_32165000_32165800
transcript_114259.known	chr2	+	5089	14	FSM	ENSG00000152683.14	ENST00000282587.9	5089	14	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	10.9160323979736	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTTTGGCATCCTTTTG	32163248	True	NA	5	True	ATTAAA	-19	NA	32165863	32224379	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_32165904_32171286_32171374_32174062_32174148_32175318_32175362_32184272_32184339_32192335_32192417_32192917_32192954_32193888_32193984_32197343_32197393_32197706_32197827_32204589_32204693_32206885_32206934_32209492_32209562_32220212
transcript_114268.known	chr2	+	4776	13	FSM	ENSG00000152683.14	ENST00000435660.5	4776	13	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_12	27.9149253188246	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATCTTTCTTTATTCAG	32163225	True	NA	38	True	ATTAAA	-32	NA	32165840	32224112	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_32165904_32171286_32171374_32174062_32174148_32175318_32175362_32184272_32184339_32192335_32192417_32192917_32192954_32193888_32193984_32197343_32197393_32197706_32197827_32204589_32204693_32206885_32206934_32220212
transcript_11427.nic	chr1	-	1233	7	NIC	ENSG00000117543.22	novel	1768	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	113.273636238388	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTCGGGTATTTCTT	-101021487	True	NA	-23	True	ATTAAA	-16	NA	101025793	100990062	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_100990632_100995109_100995150_101001466_101001588_101013709_101013819_101021640_101021766_101025308_101025467_101025682
transcript_114282.known	chr2	+	11955	6	FSM	ENSG00000119820.11	ENST00000238831.9	11955	6	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	31.6644911533408	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGATTAATTTGTCTTTT	32272358	True	NA	NA	False	AATAAA	-16	NA	32277903	32316594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_32278235_32290482_32290637_32292176_32292349_32298233_32298312_32301381_32301496_32305488
transcript_11429.known	chr1	+	1266	6	FSM	ENSG00000233184.8	ENST00000658370.1	1266	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	4.06939798987516	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAACTGTTTTTCTTACA	101025267	True	NA	10	True	AATAAA	-23	NA	101025906	101087268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_101026062_101075394_101075717_101077362_101077509_101080886_101080999_101083460_101083575_101086851
transcript_114296.known	chr2	+	15703	74	FSM	ENSG00000115760.15	ENST00000421745.7	15687	74	5	-21	5	21	multi-exon	TRUE	canonical	2	9	junction_7	40.977482385768	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTTGCCATGGTGTGAA	32356970	False	NA	25	True	AATAAA	-38	NA	32357027	32618899	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_32357487_32377587_32377770_32380152_32380291_32388749_32388944_32392038_32392151_32395510_32395594_32401162_32401386_32401462_32401624_32406498_32406558_32414768_32416164_32429145_32429296_32430864_32431091_32433643_32433805_32435495_32435586_32436052_32436185_32439507_32439687_32441328_32441463_32442064_32442227_32442323_32442456_32443490_32443589_32445520_32445669_32448794_32448929_32453807_32453943_32463193_32463382_32464508_32464824_32465064_32465165_32467524_32467740_32467902_32468112_32468436_32468784_32469394_32469615_32470167_32470302_32471013_32471125_32473111_32473240_32476212_32476345_32477367_32477584_32478634_32478819_32479461_32479618_32481319_32481454_32482428_32482583_32485642_32485760_32487646_32487802_32488587_32488715_32490040_32490152_32491424_32491559_32493539_32493668_32499546_32500110_32501712_32501889_32502794_32502892_32503041_32503237_32505004_32505206_32507979_32508260_32509737_32509995_32510525_32510635_32512932_32513155_32514989_32515771_32518253_32518398_32518816_32518947_32524887_32525020_32525463_32525629_32529650_32529825_32531354_32531552_32543240_32543542_32545642_32545861_32547849_32548015_32549312_32549482_32575155_32575367_32593914_32594061_32595033_32595145_32597750_32597969_32599738_32599901_32603005_32603084_32607454_32607644_32611447_32611583_32617724
transcript_114302.known	chr2	+	2888	20	FSM	ENSG00000018699.13	ENST00000317907.9	2888	20	0	0	0	0	multi-exon	FALSE	canonical	2	104	junction_17	20.9030210277998	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTGGTTTTGTGATGT	32623564	True	NA	5	True	AATAAA	-18	NA	32628049	32821051	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_32628381_32630522_32630701_32633875_32634006_32640269_32640411_32650130_32650234_32664302_32664468_32666634_32666769_32672271_32672385_32678855_32678923_32702806_32702921_32733827_32733924_32736693_32736817_32758291_32758520_32777881_32777981_32782625_32782679_32786983_32787150_32811023_32811222_32812503_32812616_32817456_32817558_32820815
transcript_114309.nnic	chr2	+	2834	19	NIC	ENSG00000018699.13	novel	2888	20	NA	NA	-27	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_13	37.5310570982697	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTGGTTTTGTGATGT	NA	False	NA	5	True	AATAAA	-18	NA	32628004	32821051	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_32628381_32630522_32630701_32633875_32634006_32640269_32640411_32650130_32650234_32664302_32664468_32666634_32666769_32672271_32672385_32678855_32678923_32702806_32702921_32733827_32733924_32736693_32736817_32758291_32758520_32782625_32782679_32786983_32787150_32811023_32811222_32812503_32812616_32817456_32817558_32820815
transcript_114310.nnic	chr2	+	2810	19	NIC	ENSG00000018699.13	novel	2888	20	NA	NA	-27	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_11	38.4040008846815	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTGGTTTTGTGATGT	NA	False	NA	5	True	AATAAA	-18	NA	32628004	32821051	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_32628381_32630522_32630701_32633875_32634006_32640269_32640411_32650130_32650234_32664302_32664468_32666634_32666769_32672271_32672385_32678855_32678923_32702806_32702921_32733827_32733924_32758291_32758520_32777881_32777981_32782625_32782679_32786983_32787150_32811023_32811222_32812503_32812616_32817456_32817558_32820815
transcript_114316.known	chr2	+	6502	34	FSM	ENSG00000049323.16	ENST00000404816.7	6502	34	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_11	27.744803201378	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTCCCCTAACATTCAT	32946556	True	NA	14	True	ATTAAA	-27	NA	32946952	33399509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_32947819_32948874_32948946_33020908_33021207_33110581_33110752_33134792_33134961_33186855_33187081_33188576_33188852_33217551_33217655_33222079_33222152_33243661_33243785_33252676_33252845_33257283_33257512_33259587_33259611_33262721_33262822_33263293_33263393_33273655_33273782_33274964_33275091_33275800_33275924_33280038_33280159_33293159_33293283_33300450_33300574_33301521_33301645_33309433_33309557_33315143_33315270_33342837_33342964_33347366_33347511_33360596_33360780_33361428_33361516_33363389_33363519_33364215_33364357_33365332_33365504_33389183_33389307_33397132_33397283_33398363
transcript_114326.nic	chr2	+	4413	27	ISM	ENSG00000049323.16	ENST00000404816.7	6502	34	0	38872	0	-2784	5prime_fragment	FALSE	canonical	3	62	junction_11	19.7640295462571	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGCTACTATAATCTCAA	32946556	True	NA	NA	False	AAGAAA	-6	NA	32946952	33360637	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_32947819_32948874_32948946_33020908_33021207_33110581_33110752_33134792_33134961_33186855_33187081_33188576_33188852_33217551_33217655_33222079_33222152_33243661_33243785_33252676_33252845_33257283_33257512_33259587_33259611_33262721_33262822_33263293_33263393_33273655_33273782_33274964_33275091_33275800_33275924_33280038_33280159_33293159_33293283_33300450_33300574_33301521_33301645_33309433_33309557_33315143_33315270_33342837_33342964_33347366_33347511_33360596
transcript_114337.nic	chr2	+	2567	2	ISM	ENSG00000049323.16	ENST00000404816.7	6502	34	0	448934	0	-238101	5prime_fragment	FALSE	canonical	3	98	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGACATGGTGGTGC	32946556	True	NA	NA	False	NA	NA	NA	32946952	32950575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_32947819_32948874
transcript_114345.known	chr2	-	2751	8	FSM	ENSG00000119812.20	ENST00000238823.13	2751	8	0	0	0	0	multi-exon	FALSE	canonical	3	684	junction_3	63.3165033134074	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGGTTTGAGTTTTATT	-33589413	True	NA	-17	True	AATAAA	-18	NA	33599299	33583659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_33585445_33585529_33585698_33586561_33586679_33587239_33587321_33588334_33588520_33592079_33592215_33595488_33595638_33599168
transcript_114352.nic	chr2	-	648	4	ISM	ENSG00000119812.20	ENST00000689713.1	2482	9	0	4649	0	-2721	5prime_fragment	FALSE	canonical	3	747	junction_2	72.8422954058972	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGACCTTTAGTACCAAA	-33589461	True	NA	NA	False	AATATA	-37	NA	33599347	33588334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_33588520_33592079_33592215_33595488_33595638_33599168
transcript_114354.known	chr2	-	2097	9	FSM	ENSG00000171055.15	ENST00000379245.8	2097	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	15.3617829368859	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTTTGAGAGCCTTAT	-36595468	True	NA	-20	True	AATAAA	-19	NA	36598191	36552257	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_36553180_36555682_36555749_36558437_36558514_36560784_36560866_36578596_36578866_36581289_36581432_36583352_36583470_36590902_36591012_36597876
transcript_114356.known	chr2	-	1993	8	FSM	ENSG00000171055.15	ENST00000405912.8	1993	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	9.14508901330241	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTTTGAGAGCCTTAT	-36595445	True	NA	-20	True	AATAAA	-19	NA	36598168	36552257	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_36553180_36555682_36555749_36558437_36558514_36578596_36578866_36581289_36581432_36583352_36583470_36590902_36591012_36597876
transcript_114357.nnic	chr2	-	769	6	NNC	ENSG00000171055.15	novel	1869	7	NA	NA	7	10995	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	12.687001221723	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCAGCTCTCAGAATGGGA	-36595436	True	NA	NA	False	AAAAAG	-18	NA	36598159	36578645	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_36578866_36581289_36581432_36583352_36583470_36590902_36591012_36597876_36597951_36598052
transcript_114361.nic	chr2	-	1188	8	ISM	ENSG00000115808.12	ENST00000263918.9	14174	18	-102	49047	-102	-17042	5prime_fragment	TRUE	canonical	3	52	junction_3	7.79062754539199	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAGAGAAAGGGGAAAAAGG	-36961822	True	NA	-4	True	AATACA	-5	NA	36966638	36886744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_36886827_36893897_36894034_36899522_36899659_36902583_36902752_36905539_36905619_36916077_36916152_36925104_36925209_36966229
transcript_114363.known	chr2	-	6937	36	FSM	ENSG00000008869.12	ENST00000233099.6	6937	36	0	0	0	0	multi-exon	TRUE	canonical	3	42	junction_21	10.3487749447528	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAATGTTTAAATGTAAT	-37082851	True	NA	NA	False	ATTAAA	-20	NA	37084372	36980894	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_36981795_36988645_36988860_36990647_36990800_37000585_37000814_37002305_37002573_37003541_37003687_37005631_37005760_37007049_37007305_37008610_37008849_37013840_37014021_37019808_37019878_37020654_37020837_37027922_37028175_37028680_37028921_37032628_37032774_37037854_37038025_37040328_37040519_37041132_37041293_37049652_37049844_37053501_37053608_37056439_37056616_37057316_37057481_37058450_37058561_37058887_37058988_37060580_37060734_37061938_37062051_37064739_37064991_37065754_37065911_37068680_37068931_37070229_37070388_37072109_37072282_37075484_37075635_37076910_37077020_37079119_37079332_37083288_37083437_37084268
transcript_114373.known	chr2	-	9975	17	FSM	ENSG00000055332.19	ENST00000233057.9	9975	17	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_16	22.8336374675609	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTATGTTAAAGTATTT	-37151082	True	NA	0	True	AATAAA	-20	NA	37156980	37099209	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_37107396_37107473_37107528_37109193_37109296_37114730_37114860_37119958_37120140_37122505_37122665_37126288_37126412_37135483_37135547_37136982_37137018_37138269_37138364_37138508_37138586_37139630_37139758_37141552_37141702_37146852_37146974_37147687_37147823_37148856_37149024_37156907
transcript_114375.known	chr2	-	9931	17	FSM	ENSG00000055332.19	ENST00000681463.1	9931	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	38.2963363130209	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTATGTTAAAGTATTT	-37151146	True	NA	0	True	AATAAA	-20	NA	37157044	37099209	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_37107396_37107473_37107528_37109193_37109296_37114730_37114860_37119958_37120140_37122505_37122665_37126288_37126412_37135483_37135547_37136982_37137018_37138269_37138364_37138508_37138586_37139630_37139758_37141552_37141702_37146852_37146974_37147687_37147823_37148856_37148916_37156907
transcript_11438.known	chr1	+	587	4	FSM	ENSG00000233184.8	ENST00000656224.2	882	4	182	113	88	31	multi-exon	FALSE	canonical	1	3	junction_1	3.85861230093008	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTTAGGGAATTAAATCA	101025399	False	NA	NA	False	NA	NA	NA	101026038	101087155	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_101026062_101077362_101077509_101083460_101083575_101086851
transcript_114384.known	chr2	-	9835	16	FSM	ENSG00000055332.19	ENST00000679507.1	9835	16	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_15	36.9880461170302	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTATGTTAAAGTATTT	-37151109	True	NA	0	True	AATAAA	-20	NA	37157007	37099209	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_37107396_37107473_37107528_37109193_37109296_37114730_37114860_37119958_37120140_37122505_37122665_37126288_37126412_37135483_37135547_37136982_37137018_37138269_37138364_37138508_37138586_37139630_37139758_37141552_37141702_37146852_37146974_37147687_37147823_37156907
transcript_114385.known	chr2	-	9846	16	FSM	ENSG00000055332.19	ENST00000679979.1	9846	16	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	41.6276617433915	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTATGTTAAAGTATTT	-37151082	True	NA	0	True	AATAAA	-20	NA	37156980	37099209	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_37107396_37107473_37107528_37109193_37109296_37119958_37120140_37122505_37122665_37126288_37126412_37135483_37135547_37136982_37137018_37138269_37138364_37138508_37138586_37139630_37139758_37141552_37141702_37146852_37146974_37147687_37147823_37148856_37149024_37156907
transcript_114393.known	chr2	+	3839	9	FSM	ENSG00000152133.16	ENST00000674370.2	3839	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	6.60965203320114	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTAAACATTTAATTGT	37083775	True	NA	47	True	AATAAA	-19	NA	37084517	37099244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_37084571_37088368_37088441_37089639_37089867_37090680_37090723_37091915_37092037_37092164_37092256_37094081_37094196_37095436_37095519_37096207
transcript_114395.known	chr2	+	3905	9	FSM	ENSG00000152133.16	ENST00000409774.6	3905	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	6.60965203320114	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGTTAAACATTTAATTG	37083708	True	NA	46	True	AATAAA	-18	NA	37084450	37099243	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_37084571_37088368_37088441_37089639_37089867_37090680_37090723_37091915_37092037_37092164_37092256_37094081_37094196_37095436_37095519_37096207
transcript_114396.known	chr2	+	3570	7	FSM	ENSG00000152133.16	ENST00000281932.6	3570	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	12.0646407139026	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTAAACATTTAATTGT	37083775	True	NA	47	True	AATAAA	-19	NA	37084517	37099244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_37084571_37088368_37088441_37091915_37092037_37092164_37092256_37094081_37094196_37095436_37095519_37096207
transcript_11440.known	chr1	+	619	2	FSM	ENSG00000233184.8	ENST00000654574.2	634	2	11	4	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTAACTGTTTTTCTT	101025217	True	NA	7	True	AATAAA	-20	NA	101025856	101087265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_101026062_101086851
transcript_114402.known	chr2	-	3346	16	FSM	ENSG00000115816.15	ENST00000234170.10	3346	16	0	0	0	0	multi-exon	FALSE	canonical	3	984	junction_13	50.4630117566872	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGTGGAAGCATTGTTA	-37210859	True	NA	-10	True	AATAAA	-31	NA	37231596	37201611	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_37201904_37202783_37202866_37202949_37203009_37210998_37211083_37211842_37212040_37212334_37212393_37213863_37213962_37214885_37214953_37216139_37216209_37216315_37216419_37216983_37217038_37220384_37220474_37222379_37222564_37223169_37223402_37227543_37229037_37231411
transcript_11441.known	chr1	+	2778	2	FSM	ENSG00000170989.10	ENST00000305352.7	2778	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTTGTGAAGAGCATTC	101236627	True	NA	8	True	AATAAA	-17	NA	101237018	101241518	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_101237100_101238821
transcript_114410.nic	chr2	-	2955	13	ISM	ENSG00000115816.15	ENST00000234170.10	3346	16	-33	9378	-33	-9206	5prime_fragment	FALSE	canonical	3	984	junction_10	49.893776053621	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATTTAATATCTTTTAAA	NA	False	NA	NA	False	AAGAAA	-2	NA	37231629	37210989	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_37211083_37211842_37212040_37212334_37212393_37213863_37213962_37214885_37214953_37216139_37216209_37216315_37216419_37216983_37217038_37220384_37220474_37222379_37222564_37223169_37223402_37227543_37229037_37231411
transcript_114413.nic	chr2	-	2665	11	ISM	ENSG00000115816.15	ENST00000234170.10	3346	16	-33	10723	-33	-10551	5prime_fragment	FALSE	canonical	3	984	junction_8	53.8241581448331	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACATACTTCTATCTTCT	NA	False	NA	NA	False	NA	NA	NA	37231629	37212334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_37212393_37213863_37213962_37214885_37214953_37216139_37216209_37216315_37216419_37216983_37217038_37220384_37220474_37222379_37222564_37223169_37223402_37227543_37229037_37231411
transcript_114418.nic	chr2	-	2546	10	ISM	ENSG00000115816.15	ENST00000234170.10	3346	16	-33	12313	-33	-12141	5prime_fragment	FALSE	canonical	3	984	junction_7	54.1048365059292	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGGATGCAGATGAAGAAAG	NA	False	NA	-56	True	TATAAA	-28	NA	37231629	37213924	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_37213962_37214885_37214953_37216139_37216209_37216315_37216419_37216983_37217038_37220384_37220474_37222379_37222564_37223169_37223402_37227543_37229037_37231411
transcript_114424.nic	chr2	-	2411	8	ISM	ENSG00000115816.15	ENST00000234170.10	3346	16	-33	14559	-33	12437	5prime_fragment	FALSE	canonical	3	984	junction_5	56.1692050133944	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTATTAAGGATATTCG	NA	False	NA	NA	False	AAGAAA	-2	NA	37231629	37216170	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_37216209_37216315_37216419_37216983_37217038_37220384_37220474_37222379_37222564_37223169_37223402_37227543_37229037_37231411
transcript_114435.known	chr2	+	3152	5	FSM	ENSG00000218739.10	ENST00000402297.6	3152	5	0	0	0	0	multi-exon	FALSE	canonical	3	579	junction_1	92.2306890357	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTTTTTGTTTCAG	37181639	True	NA	29	True	AATAAA	-33	NA	37196495	37204743	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_37196521_37199703_37199820_37201047_37201093_37201641_37201727_37201862
transcript_114438.known	chr2	+	695	5	FSM	ENSG00000218739.10	ENST00000392061.6	695	5	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_4	272.672422514636	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCTTGCCTCTTTTTGTT	37181651	True	NA	25	True	AATAAA	-29	NA	37196507	37204739	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_37196521_37199703_37199820_37201047_37201093_37201641_37201727_37204303
transcript_114441.nic	chr2	-	2087	4	ISM	ENSG00000115816.15	ENST00000234170.10	3346	16	-33	20808	-33	6188	5prime_fragment	FALSE	canonical	3	984	junction_1	39.6512575112344	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGAGGTTGCTTCCTGGGT	NA	False	NA	NA	False	NA	NA	NA	37231629	37222419	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_37222564_37223169_37223402_37227543_37229037_37231411
transcript_114444.nic	chr2	-	442	2	ISM	ENSG00000115816.15	ENST00000234170.10	3346	16	-33	27201	-33	-205	5prime_fragment	FALSE	canonical	3	1079	junction_1	0	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAGCAGAAAGTCAAAGGA	NA	False	NA	NA	False	AATAAA	-10	NA	37231629	37228812	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_37229037_37231411
transcript_114448.known	chr2	-	6156	19	FSM	ENSG00000115825.11	ENST00000234179.8	6156	19	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_17	51.7375857358824	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGTTGATTATCTGGAG	-37320477	False	NA	-15	True	AATAAA	-31	NA	37324833	37250501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_37253351_37254203_37254290_37256661_37256930_37259582_37259682_37260222_37260385_37267429_37267537_37269614_37269688_37272379_37272433_37274420_37274698_37275766_37275845_37277865_37277990_37279745_37279930_37282541_37282620_37286176_37286370_37289355_37289514_37290867_37291000_37293132_37293272_37316236_37317180_37324680
transcript_11445.known	chr1	-	7311	67	FSM	ENSG00000060718.22	ENST00000370096.9	7311	67	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_59	10.8441247374933	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGATTGGTCATTTTCTT	-103107454	True	NA	-5	True	AATAAA	-20	NA	103108522	102876472	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_102878166_102879682_102879917_102881696_102881766_102883198_102883312_102886806_102887057_102888576_102888631_102888722_102888759_102888865_102888920_102889454_102889563_102890450_102890505_102898124_102898179_102898665_102898774_102898940_102898995_102912158_102912213_102913636_102913691_102914351_102914406_102914703_102914812_102915630_102915685_102920310_102920365_102921517_102921572_102923335_102923390_102934448_102934557_102935059_102935114_102939034_102939089_102940326_102940435_102946848_102946957_102961865_102961920_102962175_102962266_102962652_102962761_102965486_102965541_102970218_102970273_102974829_102974884_102978707_102978753_102978859_102978914_102979059_102979105_102979381_102979436_102984137_102984192_102987632_102987741_102989517_102989572_102995863_102995909_102995988_102996043_102997079_102997125_102998309_102998364_103001924_103001970_103002427_103002482_103002746_103002792_103003214_103003269_103004443_103004489_103004607_103004662_103005837_103005892_103006067_103006122_103006261_103006316_103008462_103008517_103012412_103012470_103014510_103014595_103015667_103015743_103017819_103017883_103018817_103018860_103021706_103021770_103022741_103022997_103025520_103025614_103026215_103026333_103031115_103031245_103074617_103074781_103078657_103078872_103082804_103082973_103108072
transcript_114450.nic	chr2	-	2775	18	NIC	ENSG00000115825.11	novel	6156	19	NA	NA	0	-2438	combination_of_known_junctions	FALSE	canonical	3	61	junction_17	77.104880712947	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGGTTTTGTATTTTTT	-37320477	False	NA	-3	True	TATAAA	-19	NA	37324833	37252939	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_37253351_37254203_37254290_37256661_37256930_37259582_37259682_37260222_37260385_37267429_37267537_37269614_37269688_37272379_37272433_37274420_37274698_37275766_37275845_37277865_37277990_37279745_37279930_37282541_37282620_37286176_37286370_37289355_37289514_37290867_37291000_37293132_37293272_37324680
transcript_114473.nic	chr2	+	1314	10	NIC	ENSG00000003509.16	novel	2184	10	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_5	81.7706820593081	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGCAGGTAACAAAAGTCAA	37228247	True	NA	NA	False	AATAAA	-19	NA	37231633	37248420	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_37231761_37232105_37232267_37236095_37236177_37237756_37237868_37241577_37241638_37242634_37242694_37243862_37243974_37246051_37246196_37247455_37247630_37248134
transcript_114477.known	chr2	+	2184	10	FSM	ENSG00000003509.16	ENST00000002125.9	2184	10	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_5	53.6009489505089	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTAGTGTACACTGGTT	37228271	True	NA	13	True	AATAAA	-25	NA	37231657	37249160	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_37231761_37232105_37232267_37236095_37236177_37237756_37237868_37241577_37241792_37242634_37242694_37243862_37243974_37246051_37246196_37247455_37247630_37248134
transcript_114481.nic	chr2	+	2612	10	NIC	ENSG00000003509.16	novel	2184	10	NA	NA	-1	0	intron_retention	FALSE	canonical	3	79	junction_9	79.5060367301956	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTTTTTGTTTTGTGTT	37228270	True	NA	14	True	AAGAAA	-15	NA	37231656	37253403	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_37231761_37232105_37232267_37236095_37236177_37237756_37237868_37241577_37242694_37243862_37243974_37246051_37246196_37247455_37247630_37248134_37248427_37253085
transcript_114482.nic	chr2	+	1238	9	NIC	ENSG00000003509.16	novel	2184	10	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_5	98.0349905645938	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGCAGGTAACAAAAGTCAA	37228264	True	NA	NA	False	AATAAA	-19	NA	37231650	37248420	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_37231761_37232105_37232267_37236095_37236177_37237756_37237868_37241577_37241638_37243862_37243974_37246051_37246196_37247455_37247630_37248134
transcript_114484.nic	chr2	+	2294	9	NIC	ENSG00000003509.16	novel	2184	10	NA	NA	-7	0	intron_retention	FALSE	canonical	3	229	junction_5	37.1430932341398	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGCAGGTAACAAAAGTCAA	37228264	True	NA	NA	False	AATAAA	-19	NA	37231650	37248420	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_37231761_37232105_37232267_37236095_37236177_37237756_37237868_37241577_37242694_37243862_37243974_37246051_37246196_37247455_37247630_37248134
transcript_114496.nic	chr2	+	1516	4	ISM	ENSG00000003509.16	ENST00000455230.5	946	9	22	8654	-5	-2706	5prime_fragment	FALSE	canonical	3	314	junction_3	11.1455023315337	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAGTCACATTGGTAGTC	37228266	True	NA	NA	False	AATACA	-33	NA	37231652	37238922	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_37231761_37232105_37232267_37236095_37236177_37237756
transcript_114502.known	chr2	+	1683	7	FSM	ENSG00000115828.17	ENST00000338415.8	1683	7	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_5	19.2995394303134	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGATGTCTTTTTTAT	37342902	True	NA	NA	False	ATTAAA	-18	NA	37344629	37373322	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_37344852_37352788_37352936_37359579_37359859_37367231_37367409_37369684_37369785_37372355_37372473_37372681
transcript_114503.known	chr2	-	5096	2	FSM	ENSG00000163171.8	ENST00000295324.4	5096	2	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTGCATTTAATTATCT	-37667752	True	NA	-12	True	AATGAA	-18	NA	37671642	37641943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_37646823_37671425
transcript_114504.known	chr2	-	997	2	FSM	ENSG00000163171.8	ENST00000457889.1	997	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACTAAGTCAGAGGAGT	-37672014	True	NA	NA	False	NA	NA	NA	37672199	37645940	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_37646823_37672084
transcript_114510.known	chr2	+	1893	11	FSM	ENSG00000115841.21	ENST00000354545.8	1893	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	5.10783711564885	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTTTCACTCGTGTCCA	37925027	True	NA	4	True	AATAAA	-31	NA	37925286	38017744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_37925426_37929261_37929730_37974039_37974215_37975211_37975315_37981282_37981344_37989540_37989617_37991219_37991298_37997415_37997515_38003990_38004045_38004135_38004217_38017185
transcript_114511.known	chr2	-	5218	3	FSM	ENSG00000138061.12	ENST00000610745.5	5218	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	1.5	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTATTTGTCCATTCTA	-38076013	True	NA	93	True	ATTAAA	-16	NA	38076151	38067508	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_38071311_38074345_38075390_38075779
transcript_114514.known	chr2	-	3805	13	FSM	ENSG00000119787.14	ENST00000378954.9	3805	13	0	0	0	0	multi-exon	TRUE	canonical	3	269	junction_1	32.5059823553894	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATCTAGACCATTGGCT	-38372887	True	NA	NA	False	ATTAAA	-24	NA	38377273	38293953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_38296114_38298143_38298576_38299255_38299328_38300271_38300329_38309378_38309507_38310308_38310448_38313150_38313244_38314607_38314665_38315283_38315335_38318534_38318640_38318884_38319020_38343267_38343513_38377142
transcript_114516.known	chr2	-	2335	13	FSM	ENSG00000119787.14	ENST00000419554.6	2335	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	89.0012484306946	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAGAAGTAGTTTAGTGT	-38372887	True	NA	-4	True	AATAAA	-24	NA	38377273	38295900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_38296591_38298143_38298576_38299255_38299328_38300271_38300329_38309378_38309507_38310308_38310448_38313150_38313244_38314607_38314665_38315283_38315335_38318534_38318640_38318884_38319020_38343267_38343513_38377142
transcript_114518.known	chr2	-	1600	12	FSM	ENSG00000119787.14	ENST00000651368.1	1600	12	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_11	95.3215523746201	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTAGAAGTAGTTTAGT	-38372876	True	NA	-6	True	AATAAA	-22	NA	38377262	38295902	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_38296114_38298143_38298576_38299255_38299328_38300271_38300329_38309378_38309507_38310308_38310448_38313150_38313244_38314607_38314665_38315283_38315335_38318534_38318640_38318884_38319020_38377142
transcript_114519.nic	chr2	-	4921	12	NIC	ENSG00000119787.14	novel	3805	13	NA	NA	-5	269	intron_retention	FALSE	canonical	3	275	junction_4	30.051746006123	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACTTGTGATTCTTTTT	-38372904	True	NA	NA	False	ATTAAA	-21	NA	38377290	38294884	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_38298576_38299255_38299328_38300271_38300329_38309378_38309507_38310308_38310448_38313150_38313244_38314607_38314665_38315283_38315335_38318534_38318640_38318884_38319020_38343267_38343513_38377142
transcript_114537.known	chr2	-	2779	14	FSM	ENSG00000143889.16	ENST00000358367.8	2779	14	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_13	159.06077882667	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTGTTTTTTTTTTCTTT	-38602963	False	NA	-1	True	ATTAAA	-18	NA	38603036	38563185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_38564238_38568198_38568298_38568385_38568444_38569132_38569335_38569803_38569926_38573209_38573428_38577460_38577533_38581912_38581986_38582071_38582174_38583845_38583927_38585643_38585882_38591529_38591649_38602437_38602601_38602856
transcript_114557.known	chr2	-	3035	13	FSM	ENSG00000143889.16	ENST00000608859.5	3035	13	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_9	59.8253824800886	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTGTTTTTTTTTTCTTT	-38602963	False	NA	-1	True	ATTAAA	-18	NA	38603036	38563185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_38564238_38568198_38568298_38568385_38568444_38569132_38569335_38569803_38569926_38573209_38573428_38577460_38577533_38581912_38581986_38582071_38582174_38583845_38583927_38585643_38585882_38591529_38591649_38602437
transcript_114565.nnic	chr2	-	2494	13	NNC	ENSG00000143889.16	novel	3035	13	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	196.149797490478	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAATGTGTTCATTTTCAT	-38602938	False	NA	-18	True	TATAAA	-14	NA	38603011	38563507	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_38564238_38568198_38568298_38568385_38568444_38569132_38569335_38569803_38569926_38573209_38573428_38577460_38577533_38581912_38581986_38582071_38582174_38583845_38583927_38585643_38585882_38591529_38591649_38602631
transcript_114572.nnic	chr2	-	1892	13	NNC	ENSG00000143889.16	novel	3035	13	NA	NA	18	-78	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	196.149797490478	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAAATGGTTGATCTCAT	-38602938	False	NA	-20	True	ATTAAA	-7	NA	38603011	38564109	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_38564238_38568198_38568298_38568385_38568444_38569132_38569335_38569803_38569926_38573209_38573428_38577460_38577533_38581912_38581986_38582071_38582174_38583845_38583927_38585643_38585882_38591529_38591649_38602631
transcript_114574.known	chr2	-	1908	12	FSM	ENSG00000143889.16	ENST00000409328.5	1908	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	203.812058946228	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTGTAAGCTTAAATAT	-38602784	False	NA	-17	True	AATAAA	-21	NA	38602857	38564031	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_38564238_38568198_38568298_38568385_38568444_38569132_38569335_38569803_38569926_38573209_38573428_38577460_38577533_38581912_38581981_38583840_38583927_38585643_38585882_38591529_38591649_38602437
transcript_114581.known	chr2	-	1687	7	FSM	ENSG00000143889.16	ENST00000410076.5	1687	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	288.079126861585	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTTGCTGCATTGTTTA	-38595237	True	NA	NA	False	AATAAA	-16	NA	38602929	38581074	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_38581986_38582071_38582169_38583840_38583927_38585643_38585882_38591529_38591649_38602437_38602601_38602856
transcript_114593.known	chr2	+	2277	7	FSM	ENSG00000143891.17	ENST00000272252.10	2277	7	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_5	9.2135166407235	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACTTGTTCCTTTACTC	38664613	True	NA	8	True	AATAAA	-20	NA	38666113	38734765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_38666352_38675911_38676067_38681279_38681487_38689812_38689895_38729555_38729698_38731734_38731910_38733487
transcript_114604.known	chr2	-	1944	9	FSM	ENSG00000115875.19	ENST00000425941.6	1944	9	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_6	940.564026262965	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCATAGTGTTAATTAGGAC	-38701258	True	NA	NA	False	NA	NA	NA	38751363	38744452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_38745188_38746143_38746180_38746693_38746748_38748055_38748158_38748578_38748654_38748897_38749347_38749528_38749706_38750013_38750195_38751228
transcript_114615.known	chr2	-	1050	8	FSM	ENSG00000115875.19	ENST00000409276.5	1050	8	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_3	697.517785597249	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGATTTGTGTTCAATA	-38701253	True	NA	30	True	AATAAA	-16	NA	38751358	38744892	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_38745188_38746143_38746180_38746693_38746748_38748055_38748158_38748578_38748654_38749528_38749706_38750013_38750195_38751228
transcript_11462.nic	chr1	+	1925	16	NIC	ENSG00000185946.16	novel	2144	15	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	18.2252571998312	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTTTGTATTTTTTCTT	NA	False	NA	NA	False	AATAAA	-21	NA	103525674	103555239	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_103525824_103526066_103526263_103527694_103527743_103533738_103533858_103534773_103534858_103535329_103535442_103536125_103536195_103537341_103537485_103541349_103541476_103543295_103543448_103544940_103545103_103546247_103546343_103546976_103547036_103550940_103551074_103551720_103551793_103555033
transcript_11463.known	chr1	+	2013	15	FSM	ENSG00000185946.16	ENST00000524631.5	2013	15	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_8	20.1571631061962	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCAGTGTTTTTTTGTTT	103524376	True	NA	NA	False	NA	NA	NA	103525690	103553343	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_103526263_103527694_103527743_103533738_103533858_103534773_103534858_103535329_103535442_103536125_103536195_103537341_103537485_103541349_103541476_103543298_103543448_103544940_103545103_103546247_103546343_103546976_103547036_103550940_103551074_103551720_103551793_103553273
transcript_114634.known	chr2	-	2453	7	FSM	ENSG00000115875.19	ENST00000446327.6	2453	7	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_1	682.791980685837	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGATACTTAATTTTTGG	NA	False	NA	63	True	AATAAA	-23	NA	38751494	38743598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_38745188_38746693_38746748_38748046_38748158_38748578_38748654_38749528_38749706_38750013_38750195_38751228
transcript_114635.known	chr2	-	1903	7	FSM	ENSG00000115875.19	ENST00000443213.5	1903	7	0	0	0	0	multi-exon	FALSE	canonical	3	1870	junction_1	185.691201251492	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAATAAAATGTTTCTAA	-38701247	True	NA	5	True	NA	NA	NA	38751352	38744917	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_38745188_38746143_38746180_38746693_38746748_38748046_38748158_38748578_38749706_38750013_38750195_38751228
transcript_11464.known	chr1	+	2144	15	FSM	ENSG00000185946.16	ENST00000423855.7	2144	15	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_14	10.6849598664168	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTTTGTATTTTTTCTT	103524384	True	NA	NA	False	AATAAA	-21	NA	103525698	103555239	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_103526263_103527694_103527743_103533738_103533858_103534773_103534858_103535329_103535442_103536125_103536195_103537341_103537485_103541349_103541476_103543295_103543448_103544940_103545103_103546247_103546343_103546976_103547036_103550940_103551074_103551720_103551793_103555033
transcript_114662.known	chr2	+	3705	3	FSM	ENSG00000152147.11	ENST00000281950.8	3705	3	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_2	4.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTATTTTTTGTCTCCT	38774084	True	NA	18	True	AATAAA	-19	NA	38778209	38785002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_38778282_38778971_38779119_38781516
transcript_114664.known	chr2	+	834	4	FSM	ENSG00000152147.11	ENST00000409566.1	834	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	139.557236366382	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTTTTAAATGTAAATG	38774084	True	NA	-8	True	AAAAAG	-21	NA	38778209	38781947	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_38778282_38778971_38779119_38779257_38779442_38781516
transcript_114666.known	chr2	-	4885	24	FSM	ENSG00000163214.21	ENST00000457308.6	4885	24	0	0	0	0	multi-exon	TRUE	canonical	3	86	junction_20	17.4168290950962	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAATGAGTTCTCTTTTGG	-38872732	True	NA	-5	True	ATTAAA	-17	NA	38875934	38797728	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_38798443_38802714_38802916_38806558_38806694_38813820_38813896_38815520_38815656_38818876_38818961_38819048_38819145_38822992_38823270_38825846_38826048_38826515_38826690_38828339_38828437_38837830_38837948_38843004_38843211_38847018_38847074_38848268_38848403_38854053_38854179_38855056_38855253_38856339_38856462_38858660_38858837_38860998_38861838_38862144_38862334_38863360_38863520_38868181_38868412_38875786
transcript_114673.nic	chr2	-	4771	23	NIC	ENSG00000163214.21	novel	4885	24	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_2	28.2581444414301	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAATGAGTTCTCTTTTGG	NA	False	NA	-5	True	ATTAAA	-17	NA	38875955	38797728	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_38798443_38802714_38802916_38813820_38813896_38815520_38815656_38818876_38818961_38819048_38819145_38822992_38823270_38825846_38826048_38826515_38826690_38828339_38828437_38837830_38837948_38843004_38843211_38847018_38847074_38848268_38848403_38854053_38854179_38855056_38855253_38856339_38856462_38858660_38858837_38860998_38861838_38862144_38862334_38863360_38863520_38868181_38868412_38875786
transcript_114681.known	chr2	+	648	5	FSM	ENSG00000188010.16	ENST00000409665.5	648	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	46.8107893545922	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTTTTGAACTTTATAT	38874635	True	NA	2	True	AATAAA	-16	NA	38876010	38882647	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_38876111_38880178_38880230_38880581_38880707_38881441_38881579_38882412
transcript_114683.known	chr2	-	1056	1	FSM	ENSG00000269210.2	ENST00000601251.2	1056	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGCTATATAATTAATCT	-38960323	False	NA	-21	True	AATAAA	-30	NA	38960342	38959286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_38959300_38960300
transcript_114684.known	chr2	+	750	5	FSM	ENSG00000188010.16	ENST00000410014.5	750	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	51.2072992843794	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTTTTTGAACTTTATA	38874615	True	NA	1	True	AATAAA	-15	NA	38875990	38882646	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_38876212_38880178_38880230_38880599_38880707_38881441_38881579_38882412
transcript_114687.known	chr2	-	4335	34	FSM	ENSG00000011566.15	ENST00000263881.8	4335	34	0	0	0	0	multi-exon	TRUE	canonical	3	164	junction_19	36.4604267403714	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTCATCTGGTTTAATC	-39428905	True	NA	0	True	AATAAA	-30	NA	39437285	39249265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_39250706_39251829_39251886_39254449_39254521_39258347_39258441_39258518_39258588_39260605_39260778_39265202_39265307_39267188_39267248_39272282_39272401_39272481_39272543_39278406_39278487_39280271_39280357_39282512_39282555_39286851_39286965_39288120_39288281_39290291_39290335_39292772_39292827_39293229_39293269_39299742_39299802_39307942_39308006_39309460_39309520_39315309_39315389_39325517_39325629_39325729_39325812_39325898_39325962_39326145_39326278_39331916_39331990_39333531_39333575_39336919_39336968_39337525_39337582_39343387_39343453_39356248_39356340_39378065_39378124_39436891
transcript_114692.known	chr2	-	4271	33	FSM	ENSG00000011566.15	ENST00000341681.9	4271	33	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_19	38.5812732868875	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTGTTGTATAGTAGCT	-39428921	True	NA	-17	True	AATAAA	-13	NA	39437301	39249282	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_39250706_39251829_39251886_39254449_39254521_39258347_39258441_39258518_39258588_39260605_39260778_39265202_39265307_39267188_39267248_39272282_39272401_39272481_39272543_39278406_39278487_39280271_39280357_39282512_39282555_39286851_39286965_39288120_39288281_39290291_39290335_39292772_39292827_39293229_39293269_39299742_39299802_39309460_39309520_39315309_39315389_39325517_39325629_39325729_39325812_39325898_39325962_39326145_39326278_39331916_39331990_39333531_39333575_39336919_39336968_39337525_39337582_39343387_39343453_39356248_39356340_39378065_39378124_39436891
transcript_114694.nic	chr2	-	1921	21	ISM	ENSG00000011566.15	ENST00000263881.8	4335	34	-45	37595	-29	1354	5prime_fragment	FALSE	canonical	3	164	junction_6	39.0731365518562	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTACCAGTAGGTATTGA	-39437304	False	NA	NA	False	AAGAAA	-11	NA	39437330	39286860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_39286965_39288120_39288281_39290291_39290335_39292772_39292827_39293229_39293269_39299742_39299802_39307942_39308006_39309460_39309520_39315309_39315389_39325517_39325629_39325729_39325812_39325898_39325962_39326145_39326278_39331916_39331990_39333531_39333575_39336919_39336968_39337525_39337582_39343387_39343453_39356248_39356340_39378065_39378124_39436891
transcript_114701.nic	chr2	-	1010	11	ISM	ENSG00000011566.15	ENST00000341681.9	4271	33	53	76505	-20	0	5prime_fragment	FALSE	canonical	3	234	junction_1	25.3724259778209	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATGGCACTTACCAAAA	-39428868	True	NA	-16	True	NA	NA	NA	39437248	39325787	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_39325812_39325898_39325962_39326145_39326278_39331916_39331990_39333531_39333575_39336919_39336968_39337525_39337582_39343387_39343453_39356248_39356340_39378065_39378124_39436891
transcript_114705.known	chr2	+	3990	6	FSM	ENSG00000231312.8	ENST00000667600.1	3990	6	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_5	29.9426117765301	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATTCTTGTACAAGTATT	NA	False	NA	-9	True	AATAAA	-8	NA	39437226	39602628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_39437536_39453838_39453932_39454296_39454366_39516413_39516542_39518582_39518711_39599365
transcript_114710.known	chr2	+	2349	5	FSM	ENSG00000231312.8	ENST00000658057.1	2349	5	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_4	34.5181111881864	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCTACTAAAAATACAAAAAA	39435645	True	NA	NA	False	NA	NA	NA	39437441	39601330	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_39437536_39453838_39453932_39454296_39454366_39516413_39516542_39599365
transcript_114712.known	chr2	+	1086	4	FSM	ENSG00000231312.8	ENST00000445520.7	1091	4	5	0	1	0	multi-exon	FALSE	canonical	3	49	junction_3	22.2311093340441	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGTAGCTCACACCTG	39435628	True	NA	NA	False	TTTAAA	-20	NA	39437424	39475339	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_39437536_39453838_39453932_39454296_39454366_39474526
transcript_114716.known	chr2	+	1664	4	FSM	ENSG00000152154.11	ENST00000281961.3	1664	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	23.8932812499432	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTGTTTTCCTATG	39665377	True	NA	19	True	ATTAAA	-19	NA	39665916	39717963	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_39666375_39704080_39704195_39707048_39707187_39717009
transcript_11472.nic	chr1	+	1241	8	ISM	ENSG00000185946.16	ENST00000524631.5	2013	15	32	11868	24	0	5prime_fragment	FALSE	canonical	3	70	junction_3	11.559959042368	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATTTTATTTGAACTAAG	103524408	True	NA	NA	False	AATAAA	-37	NA	103525722	103541475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_103526263_103527694_103527743_103533738_103533858_103534773_103534858_103535329_103535442_103536125_103536195_103537341_103537485_103541349
transcript_114723.known	chr2	-	2089	11	FSM	ENSG00000138050.15	ENST00000378727.8	2089	11	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_5	74.0541018445299	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTCTTCTCCATTGGAA	-39774928	True	NA	-2	True	ATTAAA	-19	NA	39779267	39736306	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_39737060_39744369_39744479_39755294_39755410_39755888_39755961_39757247_39757369_39761330_39761419_39766056_39766110_39768423_39768502_39769709_39770120_39771504_39771641_39779113
transcript_114726.known	chr2	-	2205	10	FSM	ENSG00000138050.15	ENST00000505747.6	2205	10	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_8	30.9766937479705	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGCTCTGGTTTAATGT	-39774919	True	NA	NA	False	AAAAAG	-22	NA	39779258	39736060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_39737060_39744369_39744479_39755294_39755410_39755888_39755961_39761330_39761419_39766056_39766110_39768423_39768502_39769709_39770120_39771504_39771641_39779113
transcript_114729.known	chr2	-	1561	10	FSM	ENSG00000138050.15	ENST00000530522.1	1561	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	92.968333915969	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGCTGATGGGTACAC	-39774882	True	NA	NA	False	NA	NA	NA	39779221	39736609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_39737060_39744369_39744479_39755294_39755410_39755888_39755961_39761330_39761419_39766056_39766110_39768423_39768502_39769757_39770120_39771514_39771641_39779113
transcript_11473.nic	chr1	+	549	5	ISM	ENSG00000185946.16	ENST00000531883.5	686	6	-22	631	-16	-631	5prime_fragment	FALSE	canonical	3	24	junction_1	27.937430089398	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTGGTTATTTAACAGT	NA	False	NA	NA	False	GATAAA	-10	NA	103525674	103534810	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_103525824_103526066_103526263_103527694_103527743_103533738_103533858_103534773
transcript_114735.known	chr2	+	935	3	FSM	ENSG00000227028.6	ENST00000444629.5	935	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTTTTCTCCCCCTACT	NA	False	NA	NA	False	AATAAA	-14	NA	40104908	40255209	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_40104963_40251683_40251775_40254419
transcript_114736.nnic	chr2	+	2080	8	NNC	ENSG00000162878.13	novel	2490	7	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	48.7526032795236	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTCCCTAATGACAGTTT	42047392	True	NA	31	True	AATAAA	-37	NA	42048017	42058517	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_42048087_42048499_42048839_42053238_42053362_42054035_42054308_42054940_42055021_42055285_42055394_42057220_42057395_42057602
transcript_114739.known	chr2	+	5546	23	FSM	ENSG00000143924.19	ENST00000318522.10	5546	23	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_3	112.662673939391	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGTCTTAACTCTTTCTT	42155661	True	NA	25	True	AATAAA	-27	NA	42169352	42332548	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_42169637_42245504_42245688_42256500_42256631_42261120_42261295_42263177_42263307_42264705_42264732_42280849_42280974_42282822_42282973_42284633_42284704_42286268_42286380_42288226_42288323_42295124_42295260_42295380_42295517_42301240_42301393_42303103_42303230_42303314_42303447_42304483_42304552_42315961_42316051_42317426_42317525_42325466_42325555_42326153_42326253_42328885_42329017_42329733
transcript_114744.known	chr2	+	3568	22	FSM	ENSG00000143924.19	ENST00000402711.6	3568	22	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_3	105.620292834774	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTTGCCTTCTTTAAAA	42155661	True	NA	14	True	AAGAAA	-24	NA	42169352	42330744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_42169637_42245504_42245688_42256500_42256631_42263177_42263307_42264705_42264732_42280849_42280974_42282822_42282973_42284633_42284704_42286268_42286380_42288226_42288323_42295124_42295260_42295380_42295517_42301240_42301393_42303103_42303230_42303314_42303447_42304483_42304552_42315961_42316051_42317426_42317525_42325466_42325555_42326153_42326253_42328885_42329017_42329733
transcript_114756.known	chr2	+	962	4	FSM	ENSG00000143924.19	ENST00000409040.1	962	4	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_3	160.968595971043	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTAAGTTATAAACAATCT	42155689	True	NA	NA	False	NA	NA	NA	42169380	42261513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_42169637_42245504_42245688_42256500_42256631_42261120
transcript_114760.nnic	chr2	+	1927	3	NNC	ENSG00000143924.19	novel	3797	24	NA	NA	-55	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	323	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAGTTATAAACAATCTGA	42155606	True	NA	NA	False	NA	NA	NA	42169297	42261515	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_42169637_42245504_42245597_42260019
transcript_114761.nic	chr2	+	652	3	ISM	ENSG00000143924.19	ENST00000409040.1	962	4	-83	4883	-55	-4883	5prime_fragment	FALSE	canonical	3	646	junction_1	41	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACCCATTTATGAAAGGGG	42155606	True	NA	2	True	AAGAAA	-23	NA	42169297	42256630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_42169637_42245504_42245688_42256500
transcript_114765.known	chr2	-	2282	3	FSM	ENSG00000115944.15	ENST00000234301.3	2282	3	0	0	0	0	multi-exon	FALSE	canonical	3	1933	junction_1	48	912	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTCTCTCAGTGTCAT	-42351136	True	NA	NA	False	TATAAA	-30	NA	42361217	42349337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_42351360_42353211_42353344_42361089
transcript_114766.known	chr2	-	3656	2	FSM	ENSG00000171126.8	ENST00000394973.4	3656	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGATAACCATCAATTTTA	-42493022	True	NA	-25	True	AATAAA	-3	NA	42493977	42442031	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_42444580_42492869
transcript_11478.nic	chr1	+	764	3	ISM	ENSG00000185946.16	ENST00000524631.5	2013	15	-26	19487	-26	-1585	5prime_fragment	FALSE	canonical	3	83	junction_1	8	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATGTAGATCAGTAAATC	NA	False	NA	NA	False	NA	NA	NA	103525664	103533856	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_103526263_103527694_103527743_103533738
transcript_11479.known	chr1	+	2621	1	FSM	ENSG00000198890.9	ENST00000370078.2	2621	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	307	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTAAACTTTGGTTGTA	107052410	True	NA	13	True	ATTAAA	-22	NA	107056673	107059294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_107056700_107059300
transcript_114791.known	chr2	+	1702	14	FSM	ENSG00000057935.14	ENST00000454356.5	1702	14	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_12	400.541940567834	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTATTTGGTTTATTT	42558615	True	NA	27	True	AATAAA	-19	NA	42568674	42709213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_42568774_42570436_42570505_42579106_42579201_42609457_42609585_42640172_42640237_42644126_42644245_42656199_42656303_42659762_42659863_42682400_42682590_42695764_42695840_42697775_42697835_42704196_42704319_42707910_42708055_42708873
transcript_114792.known	chr2	+	2202	14	FSM	ENSG00000057935.14	ENST00000407270.7	2202	14	0	0	0	0	multi-exon	FALSE	canonical	3	625	junction_11	251.982741026341	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGACTGTATGTCTTTG	42568453	True	NA	19	True	AATAAA	-20	NA	42568516	42709544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_42568774_42570436_42570505_42579106_42579201_42609457_42609585_42640172_42640237_42644126_42644245_42656199_42656303_42659762_42659863_42682400_42682590_42695764_42695840_42697775_42697835_42704193_42704319_42707902_42708055_42708873
transcript_114793.known	chr2	+	2504	3	FSM	ENSG00000057935.14	ENST00000482875.5	2504	3	0	0	0	0	multi-exon	FALSE	canonical	3	1407	junction_2	132	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTATTTGGTTTATTT	42702290	False	NA	27	True	AATAAA	-19	NA	42702306	42709213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_42704319_42707902_42708055_42708873
transcript_114794.known	chr2	+	5446	17	FSM	ENSG00000057935.14	ENST00000405094.2	5446	17	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_14	534.970968838497	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTTTATGCTGTTCT	42558572	True	NA	8	True	AATAAA	-15	NA	42568631	42756946	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_42568774_42570436_42570505_42579106_42579201_42609457_42609585_42640172_42640237_42644126_42644245_42656199_42656303_42659762_42659863_42682400_42682590_42695764_42695840_42697775_42697835_42704193_42704319_42707902_42708055_42708873_42709097_42718987_42719075_42722888_42723036_42753373
transcript_114795.known	chr2	-	908	4	FSM	ENSG00000162882.15	ENST00000402268.1	908	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	2.16024689946929	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGGGCTTCCAGGTCACA	-42792206	True	NA	NA	False	NA	NA	NA	42792567	42782786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_42783421_42783783_42783868_42788528_42788608_42792456
transcript_114801.known	chr2	-	3693	2	FSM	ENSG00000152518.8	ENST00000282388.4	3693	2	0	0	0	0	multi-exon	FALSE	canonical	3	673	junction_1	0	184	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACATGTAAGAGCTTTCT	-43217417	True	NA	-5	True	AATAAA	-21	NA	43226606	43222401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_43225753_43226264
transcript_114805.known	chr2	-	6091	38	FSM	ENSG00000115970.19	ENST00000405975.7	6091	38	0	0	0	0	multi-exon	TRUE	canonical	2	48	junction_31	11.1214820522588	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGCCTCCCCTACTTCT	-43593414	True	NA	-14	True	CATAAA	-19	NA	43596038	43230850	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_43231344_43232712_43232883_43279764_43279897_43286907_43287062_43291695_43291769_43292103_43292223_43292833_43293214_43320445_43320541_43344121_43344238_43397970_43398140_43428099_43428232_43430212_43430303_43485233_43485326_43498832_43498956_43505621_43505736_43508647_43508781_43527878_43527989_43541158_43541317_43549209_43549369_43551788_43551926_43552203_43552340_43556344_43556556_43560233_43560386_43566697_43566822_43570387_43570511_43571706_43571863_43572813_43572993_43574335_43575028_43577021_43577243_43578512_43578608_43581740_43581929_43586400_43586450_43586701_43586735_43586853_43587003_43590823_43590955_43591951_43592047_43592316_43592417_43595930
transcript_11481.known	chr1	-	5025	27	FSM	ENSG00000134215.16	ENST00000370056.9	5025	27	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_16	4.82535218078837	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTAAGAGTTGGAGTCTT	-107964625	True	NA	NA	False	AATAAA	-16	NA	107965180	107571160	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_107573373_107574046_107574199_107596211_107596342_107602396_107602485_107603046_107603164_107609930_107609966_107617566_107617633_107642618_107642756_107683487_107683534_107688380_107688407_107704549_107704651_107704959_107705062_107748967_107749078_107749461_107749595_107751116_107751203_107755426_107755514_107757260_107757330_107760783_107760880_107765075_107765176_107766446_107766551_107768440_107768510_107770635_107770729_107772734_107772844_107777230_107777297_107779433_107779493_107874900_107875018_107964665
transcript_114813.nic	chr2	-	3418	20	ISM	ENSG00000115970.19	ENST00000405975.7	6091	38	-31	318210	-31	3007	5prime_fragment	FALSE	canonical	2	48	junction_13	10.7628683528163	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGGGTTTAGGAATGGA	-43593445	True	NA	-1	True	AATAAA	-28	NA	43596069	43549060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_43549369_43551788_43551926_43552203_43552340_43556344_43556556_43560233_43560386_43566697_43566822_43570387_43570511_43571706_43571863_43572813_43572993_43574335_43575028_43577021_43577243_43578512_43578608_43581740_43581929_43586400_43586450_43586701_43586735_43586853_43587003_43590823_43590955_43591951_43592047_43592316_43592417_43595930
transcript_114817.known	chr2	-	3043	17	FSM	ENSG00000115970.19	ENST00000404790.5	3043	17	0	0	0	0	multi-exon	FALSE	canonical	2	48	junction_10	10.8678137175791	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCTCTTTCTCCACCAAA	-43593399	True	NA	NA	False	AATAAA	-19	NA	43596023	43556092	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_43556556_43560233_43560386_43566697_43566822_43570387_43570511_43571706_43571863_43572813_43572993_43574335_43575028_43577021_43577243_43578512_43578608_43581740_43581929_43586400_43586450_43586701_43586735_43586853_43587003_43590823_43590955_43591951_43592047_43592316_43592417_43595930
transcript_114823.known	chr2	+	6994	30	FSM	ENSG00000152527.14	ENST00000282406.9	6994	30	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_9	4.72048688514417	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGCATTATCTTTTGA	43636770	True	NA	9	True	AATAAA	-17	NA	43637259	43767987	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_43637380_43644670_43644797_43678862_43678926_43692513_43692664_43694430_43694515_43695142_43695225_43697170_43697357_43699646_43700609_43703980_43704057_43706321_43706417_43707400_43707546_43709989_43710127_43710219_43710331_43710488_43710576_43712224_43712384_43720668_43720750_43726271_43726452_43729636_43729746_43731489_43731603_43738340_43738521_43740945_43741044_43742740_43742919_43743833_43743990_43745865_43745964_43753618_43753761_43757118_43757265_43758899_43759030_43762303_43762391_43764227_43764366_43765412
transcript_114825.known	chr2	-	1279	1	FSM	ENSG00000223658.8	ENST00000475092.4	1279	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACCTGCTTTTTAATTT	NA	False	NA	NA	False	AATAAA	-19	NA	43676429	43675150	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_43675200_43676400
transcript_114827.known	chr2	+	1346	13	FSM	ENSG00000138036.18	ENST00000605786.5	1346	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_6	15.3918719531518	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTACCTCTAACATGTTT	43773375	True	NA	1	True	AATAAA	-13	NA	43774081	43809997	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_43774147_43776781_43776900_43783519_43783555_43787180_43787251_43789632_43789722_43794456_43794644_43795886_43795959_43796717_43796796_43800840_43800918_43801638_43801710_43804641_43804740_43805153_43805247_43809704
transcript_114830.known	chr2	+	1133	6	FSM	ENSG00000138036.18	ENST00000406852.7	1133	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	11.9431989014669	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGAGCAGCATTTTATAT	43773342	True	NA	NA	False	AATAAA	-18	NA	43774048	43795179	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_43774147_43776781_43776900_43783519_43783555_43787180_43787251_43789632_43789722_43794456
transcript_114835.known	chr2	-	4757	38	FSM	ENSG00000138095.20	ENST00000682779.1	4757	38	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	394.532394209082	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATGCCTGGAGGCTCTT	-43964167	True	NA	NA	False	NA	NA	NA	43995962	43888033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_43888657_43889733_43889877_43894544_43894630_43896633_43896709_43899218_43899335_43899465_43899606_43901319_43901525_43905691_43905781_43912431_43912559_43918024_43918134_43918255_43918399_43925066_43925158_43925892_43925962_43934189_43934297_43934753_43934879_43943686_43943895_43945331_43945418_43946112_43946244_43947256_43947371_43947730_43947776_43948121_43948200_43948411_43948519_43949601_43949660_43950572_43950601_43957384_43957452_43960540_43960635_43963587_43963707_43973606_43973715_43973794_43973901_43974149_43974296_43974613_43974759_43975090_43975218_43976142_43976230_43976993_43977053_43977154_43977277_43979825_43979940_43982237_43982435_43995798
transcript_114838.known	chr2	-	4543	38	FSM	ENSG00000138095.20	ENST00000683346.1	4543	38	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	477.345845530716	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTTATTTAAGATTCACT	-43964167	True	NA	-22	True	ATTAAA	-8	NA	43995962	43888284	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_43888657_43889733_43889877_43894544_43894630_43896633_43896709_43899218_43899335_43899465_43899606_43901319_43901525_43905691_43905781_43912431_43912559_43918024_43918134_43918255_43918399_43925066_43925158_43925892_43925962_43934189_43934297_43934753_43934879_43943686_43943895_43945331_43945418_43946112_43946244_43947256_43947371_43947730_43947776_43948121_43948200_43948411_43948519_43949601_43949660_43950572_43950601_43957384_43957452_43960540_43960635_43963587_43963707_43973606_43973715_43973794_43973901_43974149_43974296_43974610_43974759_43975090_43975218_43976142_43976230_43976993_43977053_43977154_43977277_43979825_43979949_43982237_43982435_43995773
transcript_114841.known	chr2	-	4973	37	FSM	ENSG00000138095.20	ENST00000683833.1	4973	37	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	447.125520083429	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCTATATTGAATCTCAT	-43964181	True	NA	-18	True	AATAAA	-5	NA	43995976	43887756	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_43888657_43889733_43889877_43894544_43894630_43899218_43899335_43899465_43899606_43901319_43901525_43905691_43905781_43912431_43912559_43918024_43918134_43918255_43918399_43925066_43925158_43925892_43925962_43934189_43934297_43934753_43934879_43943686_43943895_43945331_43945418_43946112_43946244_43947256_43947371_43947730_43947776_43948121_43948200_43948411_43948519_43949601_43949660_43950572_43950601_43957384_43957452_43960540_43960635_43963587_43963707_43973606_43973715_43973794_43973901_43974149_43974296_43974613_43974759_43975090_43975218_43976142_43976230_43976993_43977053_43977154_43977277_43979825_43979940_43982237_43982435_43995798
transcript_114846.known	chr2	-	4216	35	FSM	ENSG00000138095.20	ENST00000684341.1	4216	35	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	310.264263966719	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTTGGGAGGCCGAGGC	-43964172	True	NA	NA	False	NA	NA	NA	43995967	43896337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_43896709_43899218_43899335_43899465_43899606_43901319_43901525_43905691_43905781_43912431_43912559_43918024_43918134_43918255_43918399_43925066_43925158_43925892_43925962_43934189_43934297_43934753_43934879_43943686_43943895_43945331_43945418_43946112_43946244_43947256_43947371_43947730_43947776_43948121_43948200_43948411_43948519_43949601_43949660_43950572_43950601_43957384_43957452_43960540_43960635_43963587_43963707_43973606_43973715_43973794_43973901_43974149_43974296_43974613_43974759_43975090_43975218_43976142_43976230_43976993_43977053_43977154_43977277_43979825_43979949_43982237_43982435_43995798
transcript_11485.nic	chr1	-	1880	15	ISM	ENSG00000134215.16	ENST00000490388.2	2271	20	-435	80046	-108	17506	5prime_fragment	FALSE	canonical	3	26	junction_4	4.69313436885006	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTTAAAGAAGAAATGGCT	-107964733	True	NA	NA	False	AAAACA	-4	NA	107965288	107749008	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_107749078_107749461_107749595_107751116_107751203_107755426_107755514_107757260_107757330_107760783_107760880_107765075_107765176_107766446_107766551_107768440_107768510_107770635_107770729_107772734_107772844_107777230_107777297_107779433_107779493_107874900_107875018_107964665
transcript_114855.nic	chr2	-	3209	29	ISM	ENSG00000138095.20	ENST00000684341.1	4216	35	-42	21688	-4	-136	5prime_fragment	FALSE	canonical	3	1380	junction_25	140.013387661644	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAAGCACATACGGGGATG	-43995897	False	NA	NA	False	NA	NA	NA	43996009	43918025	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_43918134_43918255_43918399_43925066_43925158_43925892_43925962_43934189_43934297_43934753_43934879_43943686_43943895_43945331_43945418_43946112_43946244_43947256_43947371_43947730_43947776_43948121_43948200_43948411_43948519_43949601_43949660_43950572_43950601_43957384_43957452_43960540_43960635_43963587_43963707_43973606_43973715_43973794_43973901_43974149_43974296_43974613_43974759_43975090_43975218_43976142_43976230_43976993_43977053_43977154_43977277_43979825_43979949_43982237_43982435_43995798
transcript_114859.known	chr2	-	4189	27	FSM	ENSG00000138095.20	ENST00000681961.1	4189	27	0	0	0	0	multi-exon	FALSE	canonical	3	1380	junction_23	140.104720977691	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACTGACTATATGTCTAAA	-43964172	True	NA	NA	False	TTTAAA	-44	NA	43995967	43923793	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_43925158_43925892_43925962_43934189_43934297_43934753_43934879_43943686_43943895_43945331_43945418_43946112_43946244_43947256_43947371_43947730_43947776_43948121_43948200_43948411_43948519_43949601_43949660_43950572_43950601_43957384_43957452_43960540_43960635_43963587_43963707_43973606_43973715_43973794_43973901_43974149_43974296_43974613_43974759_43975090_43975218_43976142_43976230_43976993_43977053_43977154_43977277_43979825_43979949_43982237_43982435_43995798
transcript_114860.known	chr2	-	3514	25	FSM	ENSG00000138095.20	ENST00000683989.1	3514	25	0	0	0	0	multi-exon	FALSE	canonical	3	1380	junction_21	139.118854062113	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGTAATCATGGGTTTT	-43964181	True	NA	NA	False	ATTAAA	-19	NA	43995976	43933440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_43934297_43934753_43934879_43943686_43943895_43945331_43945418_43946112_43946244_43947256_43947371_43947730_43947776_43948121_43948200_43948411_43948519_43949601_43949660_43950572_43950601_43957384_43957452_43960540_43960635_43963587_43963707_43973606_43973715_43973794_43973901_43974149_43974296_43974613_43974759_43975090_43975218_43976142_43976230_43976993_43977053_43977154_43977277_43979825_43979949_43982237_43982435_43995798
transcript_114865.known	chr2	-	1875	14	FSM	ENSG00000138095.20	ENST00000409946.6	1875	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	471.424744726906	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTAGAATACTATTTTG	-43964210	True	NA	NA	False	AATAAA	-13	NA	43996005	43958985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_43959221_43960540_43960635_43963587_43963707_43973606_43973715_43973794_43973901_43974149_43974296_43974613_43974759_43975090_43975218_43976142_43976230_43976993_43977053_43977154_43977277_43979825_43979949_43982237_43982435_43995798
transcript_114868.known	chr2	-	2040	5	FSM	ENSG00000138095.20	ENST00000684329.1	2040	5	0	0	0	0	multi-exon	FALSE	canonical	3	1380	junction_1	186.952534082852	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCATTGCACTCCAGCCT	-43964194	True	NA	NA	False	NA	NA	NA	43995989	43975645	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_43977053_43977154_43977277_43979825_43979949_43982237_43982435_43995798
transcript_114869.known	chr2	-	880	4	FSM	ENSG00000138095.20	ENST00000684691.1	880	4	0	0	0	0	multi-exon	FALSE	canonical	3	1727	junction_3	69.6387503876653	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTAATGGAGGAAATTGT	-43964194	True	NA	NA	False	TTTAAA	-6	NA	43995989	43976907	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_43977277_43979825_43979949_43982237_43982435_43995798
transcript_114872.known	chr2	-	4325	38	FSM	ENSG00000138095.20	ENST00000682480.1	4325	38	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	403.105436201744	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTTTATGTACTTATG	-43964184	True	NA	-37	True	AATAAA	-6	NA	43995979	43888509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_43888657_43889733_43889877_43894544_43894630_43896633_43896709_43899218_43899335_43899465_43899606_43901319_43901525_43905691_43905781_43912431_43912559_43918024_43918152_43918255_43918399_43925066_43925158_43925892_43925962_43934189_43934297_43934753_43934879_43943686_43943895_43945331_43945418_43946112_43946244_43947256_43947371_43947730_43947776_43948121_43948200_43948411_43948519_43949601_43949660_43950572_43950601_43957384_43957452_43960540_43960635_43963587_43963707_43973606_43973715_43973794_43973901_43974149_43974296_43974613_43974759_43975090_43975218_43976142_43976230_43976993_43977053_43977154_43977277_43979825_43979949_43982237_43982435_43995798
transcript_114873.known	chr2	-	2789	24	FSM	ENSG00000138095.20	ENST00000447246.2	2789	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	357.928206675886	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTGAATACATGCATGC	-43964199	True	NA	NA	False	AATAAA	-29	NA	43995994	43942565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_43942804_43943686_43943895_43945331_43945418_43946112_43946244_43947256_43947371_43947730_43947776_43948121_43948200_43948411_43948519_43949601_43949660_43950572_43950601_43957384_43957452_43960540_43960635_43963587_43963707_43973606_43973715_43973794_43973901_43974149_43974296_43974613_43974759_43975090_43975218_43976142_43976230_43976993_43977053_43977154_43977277_43979825_43979949_43982237_43982435_43995798
transcript_114886.known	chr2	+	2608	6	FSM	ENSG00000138032.21	ENST00000282412.9	2608	6	0	0	0	0	multi-exon	TRUE	canonical	3	494	junction_5	140.413674547745	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTTGTACTTATTTTT	44158381	True	NA	NA	False	AATAAA	-23	NA	44168874	44231472	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_44169275_44201185_44202046_44209209_44209328_44217966_44218079_44218479_44218538_44230412
transcript_114887.known	chr2	+	3877	6	FSM	ENSG00000138032.21	ENST00000378551.6	3877	6	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_5	177.078965436327	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTAGCCTGGCTATTCT	44158383	True	NA	NA	False	AGTAAA	-35	NA	44168876	44234646	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_44169275_44201185_44202046_44209209_44209328_44217966_44218079_44218479_44218538_44232315
transcript_11489.known	chr1	-	4249	10	FSM	ENSG00000085491.17	ENST00000565488.6	4249	10	0	0	0	0	multi-exon	TRUE	canonical	3	306	junction_8	29.8775277870621	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTACTTTACAGTATTT	-108195386	True	NA	NA	False	AATAAA	-15	NA	108200343	108134042	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_108136838_108139057_108139209_108143542_108143711_108148278_108148387_108154982_108155136_108157461_108157621_108161181_108161294_108181940_108182029_108185827_108185955_108199955
transcript_114891.known	chr2	+	1481	3	FSM	ENSG00000138032.21	ENST00000409486.6	1481	3	0	0	0	0	multi-exon	FALSE	canonical	3	851	junction_2	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATTTAGAGA	44158383	True	NA	NA	False	NA	NA	NA	44168876	44209432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_44169275_44201185_44202046_44209209
transcript_114892.known	chr2	+	1703	6	FSM	ENSG00000138032.21	ENST00000378540.8	1703	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	332.241117262749	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGTACTGCTGTTAAC	44158383	True	NA	NA	False	AATAAA	-21	NA	44168876	44244384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_44169275_44201185_44202046_44209209_44209328_44217966_44218079_44218479_44218538_44244227
transcript_114896.known	chr2	-	3080	15	FSM	ENSG00000138078.16	ENST00000410081.5	3080	15	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_14	45.6363174389406	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCGTTAAAGTTTTTGAATA	-44361788	False	NA	-124	True	GATAAA	-17	NA	44361806	44320921	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44359496_44359751_44361379
transcript_114897.known	chr2	-	3030	15	FSM	ENSG00000138078.16	ENST00000409272.5	3030	15	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_14	56.3925744134775	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTACTTTTAAACATTTT	-44361687	True	NA	-29	True	AATAAA	-23	NA	44361805	44320826	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44359496_44359751_44361523
transcript_114901.known	chr2	-	5212	15	FSM	ENSG00000138078.16	ENST00000409936.5	5212	15	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_14	51.5401567236853	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTTTGTAATTTTATTT	-44357353	True	NA	-10	True	ATTAAA	-13	NA	44361494	44318765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44359496_44360039_44361379
transcript_114908.known	chr2	-	5829	14	FSM	ENSG00000138078.16	ENST00000409411.6	5829	14	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_13	47.0081196561771	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTTTCTCAATGTCTAG	-44357353	True	NA	NA	False	ATTAAA	-19	NA	44361494	44317606	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44361379
transcript_114909.known	chr2	-	4703	14	FSM	ENSG00000138078.16	ENST00000409957.5	4703	14	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_13	52.0866369760929	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTAATTTTATTTTTT	-44357420	True	NA	-7	True	ATTAAA	-16	NA	44361561	44318762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44361416
transcript_114910.known	chr2	-	6049	14	FSM	ENSG00000138078.16	ENST00000541738.5	6049	14	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_13	52.331103358311	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATGTTTCTCAATGT	-44361844	False	NA	NA	False	ATTAAA	-15	NA	44361862	44317610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44361523
transcript_114923.nic	chr2	-	627	2	ISM	ENSG00000138078.16	ENST00000409936.5	5212	15	-54	40815	-2	-13282	5prime_fragment	FALSE	canonical	3	27	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCACCTAACCAAGTGTCT	-44357407	True	NA	NA	False	AATAAA	-11	NA	44361548	44359580	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_44360039_44361379
transcript_114929.known	chr2	+	1114	4	FSM	ENSG00000143919.15	ENST00000403853.7	1114	4	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_3	117.465834276279	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATGGAGATGACTCT	44358616	True	NA	NA	False	AATAAA	-33	NA	44361963	44457261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_44362146_44372715_44372889_44390240_44390306_44456567
transcript_11493.nic	chr1	-	805	5	ISM	ENSG00000085491.17	ENST00000648874.1	3533	11	-54	22692	-30	-22692	5prime_fragment	FALSE	canonical	3	306	junction_3	16.2230545829076	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGGACAATGGTGGAGGCA	-108195416	True	NA	NA	False	NA	NA	NA	108200373	108157560	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_108157621_108161181_108161294_108181940_108182029_108185827_108185955_108199955
transcript_114930.known	chr2	+	665	4	FSM	ENSG00000143919.15	ENST00000402247.5	665	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	118.873415400117	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCCTAGAACAAAGACATAG	44358602	True	NA	NA	False	NA	NA	NA	44361949	44549785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_44362146_44372715_44372889_44390240_44390306_44549554
transcript_114931.known	chr2	-	910	2	FSM	ENSG00000259439.3	ENST00000432125.2	910	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCATCAGTATGGTTGGA	-44935631	False	NA	NA	False	NA	NA	NA	44935644	44923034	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_44923580_44935279
transcript_114932.known	chr2	-	351	2	FSM	ENSG00000259439.3	ENST00000430847.3	761	2	410	0	285	0	multi-exon	FALSE	canonical	3	13	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGTTTGCAACAGTCCC	-44935346	False	NA	NA	False	AATGAA	-15	NA	44935359	44929976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_44930248_44935279
transcript_114933.known	chr2	+	2713	2	FSM	ENSG00000138083.5	ENST00000260653.5	2713	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCAGAGACTGGTGTTTT	44941320	True	NA	40	True	AATACA	-22	NA	44941701	44946071	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_44942911_44944567
transcript_114934.known	chr2	-	844	2	FSM	ENSG00000236502.2	ENST00000419364.2	887	2	43	0	43	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGCCTTTCCAGAAGAAAA	-44941810	True	NA	1	True	AATAAA	-20	NA	44941873	44940153	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_44940834_44941709
transcript_114935.known	chr2	-	2206	2	FSM	ENSG00000170577.8	ENST00000303077.7	2206	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCGCGGGCCGGGAGTGC	-45009418	False	NA	2	True	AATAAA	-40	NA	45009452	45005181	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_45006486_45008550
transcript_114938.known	chr2	-	3667	21	FSM	ENSG00000068784.13	ENST00000263736.5	3667	21	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_20	19.602232015768	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTTTTGCTATGTTGA	-45608035	True	NA	-1	True	AATAAA	-17	NA	45611267	45388679	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_45389600_45392944_45393130_45413113_45413294_45418364_45418542_45419787_45419895_45476992_45477076_45488239_45488332_45546731_45546840_45547521_45547613_45551124_45551283_45553622_45553731_45562652_45562757_45573206_45573343_45574626_45574724_45579874_45580014_45581692_45581811_45585607_45585775_45599448_45599836_45601902_45602084_45605361_45605442_45611218
transcript_11494.known	chr1	+	1566	1	FSM	ENSG00000260879.1	ENST00000564063.1	1566	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTTTTTATATTACTT	108199912	True	NA	NA	False	AGTAAA	-17	NA	108199925	108201491	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_108199900_108201500
transcript_11495.known	chr1	-	2357	1	FSM	ENSG00000085491.17	ENST00000569674.1	2357	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGTCCTTTGTATTCAT	-108200826	False	NA	NA	False	TTTAAA	-24	NA	108200849	108198492	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_108198500_108200800
transcript_114950.nic	chr2	-	380	4	ISM	ENSG00000068784.13	ENST00000263736.5	3667	21	-19	211105	-19	2137	5prime_fragment	FALSE	canonical	3	100	junction_3	29.2612751298063	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATACTGTACAGACTCT	-45608054	True	NA	NA	False	AATAAA	-1	NA	45611286	45599784	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_45599836_45601902_45602084_45605361_45605442_45611218
transcript_114952.known	chr2	+	5749	15	FSM	ENSG00000171132.14	ENST00000306156.8	5749	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.47879876053883	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCAGTGCCAATAAGAAT	45651657	False	NA	7	True	AATAAA	-21	NA	45651674	46187990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_45652449_45842999_45843064_45976428_45976589_45978975_45979011_45980295_45980382_45984550_45984681_46001403_46001547_46004541_46004639_46007461_46007662_46010343_46010518_46086207_46086363_46145092_46145232_46151040_46151230_46159605_46159753_46184734
transcript_114958.known	chr2	+	5155	16	FSM	ENSG00000116016.14	ENST00000263734.5	5155	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.98885785202351	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGCTGGTGGCTCTTAT	46297240	True	NA	8	True	ATTAAA	-15	NA	46297406	46386697	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_46297938_46346872_46347064_46356150_46356303_46356723_46356809_46360637_46360757_46360884_46361091_46369826_46369934_46375689_46375838_46376538_46376754_46377893_46378088_46378656_46378768_46380226_46380718_46381595_46381723_46381974_46382090_46382424_46382599_46384508
transcript_114962.known	chr2	-	1061	7	FSM	ENSG00000151665.13	ENST00000306465.8	1061	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	176.014203972293	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCTTCAGATGCTGCT	-46612612	True	NA	NA	False	AATAAA	-15	NA	46617051	46581284	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_46581592_46588074_46588180_46592474_46592584_46612227_46612345_46613693_46613786_46614936_46615186_46616969
transcript_114967.known	chr2	-	1294	6	FSM	ENSG00000151665.13	ENST00000281382.11	1294	6	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_5	40.2541923282532	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCTATCTGGGAGGGAG	-46612602	True	NA	NA	False	NA	NA	NA	46617041	46580936	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_46581592_46592474_46592584_46612227_46612345_46613693_46613786_46614936_46615186_46616969
transcript_114968.known	chr2	+	4780	5	FSM	ENSG00000119729.12	ENST00000238738.9	4780	5	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_2	16.4772570532841	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGTCAGGCTTTGTAC	46542349	True	NA	16	True	ATTAAA	-28	NA	46542489	46584688	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_46543189_46543753_46543813_46576086_46576252_46576560_46576657_46580927
transcript_114969.known	chr2	+	6323	5	FSM	ENSG00000119878.6	ENST00000238892.4	6323	5	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_1	27.4089401473315	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAAATCTTTTTCATATT	46611470	True	NA	NA	False	NA	NA	NA	46617214	46630176	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_46617299_46618772_46618839_46619626_46619682_46623763_46623868_46624162
transcript_114976.known	chr2	-	1599	5	FSM	ENSG00000250565.7	ENST00000522587.6	1599	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	15.9843673631458	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAATTCCAATTCATCCA	-46542046	True	NA	-10	True	AATAAA	-21	NA	46542577	46511846	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_46512813_46535812_46535928_46536610_46536704_46541389_46541454_46542216
transcript_114978.nnic	chr2	-	774	5	NIC	ENSG00000151665.13	novel	1061	7	NA	NA	-65	-2	combination_of_known_splicesites	FALSE	canonical	3	96	junction_4	157.697495224243	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGGCTTCAGATGCTG	-46612681	True	NA	NA	False	AATAAA	-13	NA	46617120	46581286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_46581592_46592474_46592584_46612227_46612345_46613693_46613786_46616969
transcript_11498.known	chr1	-	1244	8	FSM	ENSG00000162639.16	ENST00000420055.1	1244	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	11.9863868362303	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTCACAGAGGTTGAGAA	-108661143	False	NA	NA	False	NA	NA	NA	108661180	108648799	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_108648992_108650210_108650389_108651029_108651210_108654715_108654851_108655585_108655699_108657450_108657580_108659863_108659963_108660962
transcript_114982.nic	chr2	-	2420	4	ISM	ENSG00000250565.7	ENST00000522587.6	1599	5	-58	0	-58	0	intron_retention	FALSE	canonical	3	21	junction_1	12.7627931460511	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAATTCCAATTCATCCA	-46542104	True	NA	-10	True	AATAAA	-21	NA	46542635	46511846	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_46512813_46535812_46535928_46536610_46536704_46541389
transcript_114985.known	chr2	-	2334	3	FSM	ENSG00000250565.7	ENST00000505245.6	2334	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	6	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATCTGTGACACTGAAG	-46541992	False	NA	NA	False	NA	NA	NA	46542002	46534299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_46535928_46536610_46536704_46541389
transcript_114987.known	chr2	+	4766	2	FSM	ENSG00000171150.9	ENST00000394861.3	4766	2	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCATCTGTATTTTGTT	46697839	True	NA	NA	False	AATACA	-20	NA	46699294	46763129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_46699450_46758518
transcript_114989.known	chr2	+	3033	21	FSM	ENSG00000068724.17	ENST00000409245.5	3033	21	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	25.9524083660843	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAGCTGCAGCCCTCGT	46916097	True	NA	1	True	AATACA	-16	NA	46916156	47074048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_46916578_46917183_46917278_46950362_46950527_46956838_46957008_46974972_46975104_46978791_46978908_46993449_46993529_46994356_46994515_46995135_46995200_47005921_47006060_47006640_47006725_47011330_47011436_47021861_47021980_47023407_47023466_47024286_47024360_47029223_47029385_47046314_47046432_47049948_47050047_47051745_47051881_47060768_47060972_47073701
transcript_11499.known	chr1	-	1874	8	FSM	ENSG00000162639.16	ENST00000370032.9	1874	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	13.6426701557867	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAACTTACCTATTTTT	NA	False	NA	-4	True	AATAAA	-26	NA	108661526	108648294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_108648992_108650210_108650389_108651029_108651210_108654715_108654851_108655585_108655699_108657450_108657580_108659863_108659963_108661183
transcript_114992.known	chr2	+	5095	20	FSM	ENSG00000068724.17	ENST00000319190.11	5095	20	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_11	12.173719480232	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCTGCTCATTTACACAGAA	46940588	True	NA	18	True	ATTAAA	-15	NA	46941223	47076123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_46941726_46950362_46950527_46956838_46957008_46974972_46975104_46978791_46978908_46993449_46993529_46994356_46994515_46995135_46995200_47005921_47006060_47006640_47006725_47011330_47011436_47021861_47021980_47023407_47023466_47024286_47024360_47029223_47029385_47046314_47046432_47049948_47050047_47051745_47051881_47060768_47060972_47073701
transcript_115000.known	chr2	+	2418	19	FSM	ENSG00000068724.17	ENST00000441914.5	2418	19	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	22.7400772010807	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACGCTGCAGCCGCAGGGA	46941441	False	NA	NA	False	NA	NA	NA	46941542	47073923	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_46941726_46950362_46950527_46956838_46957008_46974972_46975104_46978791_46978908_46993449_46993529_46995135_46995200_47005921_47006060_47006640_47006725_47011330_47011436_47021861_47021980_47023407_47023466_47024286_47024360_47029223_47029385_47046314_47046432_47049948_47050047_47051745_47051881_47060768_47060972_47073701
transcript_115008.known	chr2	-	821	5	FSM	ENSG00000180398.13	ENST00000409973.5	821	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	292.705910428881	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTAAGTGCTATTAAATAC	-46908606	True	NA	-47	True	AATGAA	-29	NA	46915810	46905270	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_46905595_46907809_46907970_46909022_46909178_46910779_46910874_46915722
transcript_115009.known	chr2	-	3978	4	FSM	ENSG00000180398.13	ENST00000649435.1	3978	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	251.212172387318	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGTAAACTATTCTTGTA	-46908557	True	NA	-97	True	NA	NA	NA	46915761	46901966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_46905591_46907809_46907970_46909022_46909178_46915722
transcript_115010.known	chr2	-	648	4	FSM	ENSG00000180398.13	ENST00000409218.5	648	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	276.514415939246	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAAATAACTCATTTCCA	NA	False	NA	-26	True	NA	NA	NA	46916112	46905393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_46905595_46907809_46907970_46909022_46909178_46915980
transcript_115011.known	chr2	-	1113	4	FSM	ENSG00000180398.13	ENST00000409207.5	1113	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	273.217861787988	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGGGTCTCTCCCACAA	-46940886	True	NA	NA	False	NA	NA	NA	46941732	46904957	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_46905595_46907809_46907970_46909022_46909178_46941571
transcript_115016.known	chr2	-	3975	3	FSM	ENSG00000180398.13	ENST00000409913.5	3975	3	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_2	255	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGAGCAGTTGATTTTGT	-46908612	True	NA	-4	True	AATAAA	-16	NA	46915816	46901873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_46905595_46907809_46907970_46915722
transcript_115019.known	chr2	-	665	3	FSM	ENSG00000180398.13	ENST00000477791.5	665	3	0	0	0	0	multi-exon	FALSE	canonical	3	468	junction_2	56	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTAGTTCTACGTACTCA	-46908587	True	NA	NA	False	ATTAAA	-27	NA	46915791	46907528	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_46907970_46909022_46909178_46915722
transcript_115023.known	chr2	-	770	7	FSM	ENSG00000143933.20	ENST00000409563.5	770	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	4413.13718408521	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTTATTTGCCTTTTCT	-47099978	True	NA	NA	False	NA	NA	NA	47176511	47160738	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_47160805_47161722_47161859_47162285_47162393_47162518_47162663_47167475_47167691_47170733_47170765_47176440
transcript_115025.known	chr2	-	1165	7	FSM	ENSG00000143933.20	ENST00000456319.6	1165	7	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_6	4235.12774305569	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACAATTTACCCAATGGT	-47099983	True	NA	-37	True	AATAAA	-4	NA	47176516	47160179	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_47160805_47161722_47161859_47162285_47162393_47162518_47162663_47170733_47170765_47172413_47172460_47176440
transcript_115026.known	chr2	-	1076	6	FSM	ENSG00000143933.20	ENST00000655728.1	1076	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	3719.8455129212	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCGTACACTATTTTTTTG	-47176206	False	76533	NA	False	NA	NA	NA	47176223	47160338	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_47160805_47161722_47161859_47162285_47162393_47162518_47162663_47170733_47170765_47176031
transcript_115028.known	chr2	-	1242	6	FSM	ENSG00000143933.20	ENST00000652974.1	1242	6	0	0	0	0	multi-exon	FALSE	canonical	3	8699	junction_1	552.787988292076	1967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGCTCTGCATCTGAGT	NA	False	NA	-21	True	AATAAA	-20	NA	47176623	47160163	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_47160805_47161722_47161859_47162285_47162393_47162518_47162663_47170733_47170765_47176440
transcript_115032.known	chr2	-	1046	4	FSM	ENSG00000234690.7	ENST00000413185.2	1046	4	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_1	1.4142135623731	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGCACAATAAATGTAATGT	-47344661	True	NA	NA	False	AATAAA	-1	NA	47344989	47331379	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_47332108_47332272_47332409_47332933_47333027_47344900
transcript_115037.known	chr2	+	1530	10	FSM	ENSG00000119888.11	ENST00000405271.5	1530	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	898.280387362981	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCTTCCACAGTAAAATC	47345099	True	NA	-1	True	ATTAAA	-1	NA	47345157	47386900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_47345224_47368927_47369236_47373462_47373571_47373807_47374049_47375233_47375300_47377013_47377078_47378952_47379055_47379768_47379970_47385165_47385211_47386571
transcript_115042.known	chr2	+	1547	9	FSM	ENSG00000119888.11	ENST00000263735.9	1547	9	0	0	0	0	multi-exon	FALSE	canonical	3	1909	junction_2	144.984266387771	1309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTAACTTTGACATTTC	47345321	True	NA	15	True	AATAAA	-16	NA	47369310	47387020	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_47369582_47373462_47373571_47373807_47374049_47375233_47375300_47377013_47377078_47378952_47379055_47379768_47379970_47385165_47385211_47386571
transcript_115066.known	chr2	+	7893	17	FSM	ENSG00000095002.15	ENST00000645506.1	7893	17	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_16	639.372043003915	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGATTAGGCAGTATAAATA	47378656	True	NA	NA	False	NA	NA	NA	47403118	47567156	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_47403403_47408400_47408556_47410093_47410373_47412413_47412561_47414268_47414419_47416295_47416430_47429741_47429942_47445547_47445658_47463030_47463155_47466657_47466809_47470964_47471063_47475024_47475271_47476366_47476572_47478271_47478520_47480695_47480872_47512302_47512421_47562088
transcript_115071.known	chr2	+	3115	16	FSM	ENSG00000095002.15	ENST00000233146.7	3115	16	0	0	0	0	multi-exon	FALSE	canonical	3	1525	junction_3	231.912301432148	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGATGCATTGTAGTTC	47378693	True	NA	30	True	AATAAA	-19	NA	47403155	47483223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_47403403_47408400_47408556_47410093_47410373_47412413_47412561_47414268_47414419_47416295_47416430_47429741_47429942_47445547_47445658_47463030_47463155_47466657_47466809_47470964_47471063_47475024_47475271_47476366_47476572_47478271_47478520_47480695_47480872_47482778
transcript_115081.nnic	chr2	+	3046	15	NIC	ENSG00000095002.15	novel	3115	16	NA	NA	8	0	intron_retention	FALSE	canonical	3	63	junction_4	514.336490548944	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGATGCATTGTAGTTC	47378612	True	NA	30	True	AATAAA	-19	NA	47403074	47483223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_47403403_47408400_47408556_47410093_47410373_47412413_47412561_47416295_47416430_47429741_47429942_47445547_47445658_47463030_47463155_47466657_47466809_47470964_47471063_47475024_47475271_47476366_47476572_47478271_47478520_47480695_47480872_47482778
transcript_115087.nic	chr2	+	1819	11	ISM	ENSG00000095002.15	ENST00000233146.7	3115	16	-81	12218	8	-12216	5prime_fragment	FALSE	canonical	3	1525	junction_3	145.447722567251	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAATATGAAGAAGCCCAG	47378612	True	NA	NA	False	AATAAA	-2	NA	47403074	47471005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_47403403_47408400_47408556_47410093_47410373_47412413_47412561_47414268_47414419_47416295_47416430_47429741_47429942_47445547_47445658_47463030_47463155_47466657_47466809_47470964
transcript_115101.known	chr2	-	13564	2	FSM	ENSG00000184261.5	ENST00000327876.5	13564	2	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	0	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGTCTTTAATGGCCT	-47569906	True	NA	NA	False	AATAAA	-22	NA	47570985	47509289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_47521809_47569940
transcript_115102.known	chr2	-	833	2	FSM	ENSG00000184261.5	ENST00000493527.1	833	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCCTAAAACCAGAAAACC	-47570304	False	NA	NA	False	AATAAA	-16	NA	47570315	47543343	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_47543802_47569940
transcript_115103.known	chr2	+	7669	12	FSM	ENSG00000116062.18	ENST00000652107.1	7669	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	503.009455573843	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTTATTCTATCCCAATA	47695803	False	NA	NA	False	AATACA	-6	NA	47695818	47810063	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_47696098_47708182_47708431_47737390_47737507_47790926_47791124_47795893_47796064_47798610_47801156_47803419_47803686_47804909_47805028_47805617_47805708_47806203_47806359_47806451_47806652_47806778
transcript_11511.known	chr1	+	3728	7	FSM	ENSG00000134186.12	ENST00000370021.1	3728	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	140.800982477633	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATATGCTTTTTTCTTTTT	108686165	True	NA	11	True	ATTAAA	-17	NA	108692340	108701803	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_108692868_108693589_108693643_108695701_108695771_108696042_108696195_108696276_108696338_108698603_108698828_108699161
transcript_115110.nnic	chr2	+	4325	11	NNC	ENSG00000116062.18	novel	4265	10	NA	NA	4	35	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_10	375.283359609775	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGACTAAGCAATAAGAGCAA	47764644	True	NA	NA	False	AATAAA	-14	NA	47783131	47810098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_47783494_47790926_47791124_47795893_47796064_47798610_47801156_47803419_47803686_47804909_47805028_47805617_47805708_47806203_47806359_47806451_47806652_47806778_47806901_47809998
transcript_115114.known	chr2	+	4265	10	FSM	ENSG00000116062.18	ENST00000234420.11	4265	10	0	0	0	0	multi-exon	FALSE	canonical	3	644	junction_1	242.272777598789	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTTCCATTTTCTTTC	47764657	True	NA	30	True	AATAAA	-20	NA	47783144	47806953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_47783494_47790926_47791124_47795893_47796064_47798610_47801156_47803419_47803686_47804909_47805028_47805617_47805708_47806203_47806359_47806451_47806652_47806778
transcript_115117.known	chr2	+	3959	10	FSM	ENSG00000116062.18	ENST00000673637.1	3959	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	382.790275557946	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATTATGATCTAATAAAC	47764663	True	NA	-8	True	NA	NA	NA	47783150	47806915	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_47783232_47790926_47791124_47795893_47796064_47798610_47801156_47803419_47803686_47804909_47805028_47805617_47805708_47806203_47806359_47806451_47806652_47806778
transcript_115120.known	chr2	+	4055	10	FSM	ENSG00000116062.18	ENST00000538136.1	4055	10	0	0	0	0	multi-exon	FALSE	canonical	1	18	junction_3	469.654193772817	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGACCATTTTTCCAT	47783000	True	NA	22	True	AATAAA	-12	NA	47783954	47806945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_47784106_47790926_47791124_47795893_47796064_47798614_47801156_47803419_47803686_47804909_47805028_47805617_47805708_47806203_47806359_47806451_47806652_47806778
transcript_115123.known	chr2	+	4150	9	FSM	ENSG00000116062.18	ENST00000614496.4	4150	9	0	0	0	0	multi-exon	FALSE	canonical	1	20	junction_2	405.617661720986	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGACCATTTTTCCAT	47783053	False	NA	22	True	AATAAA	-12	NA	47783081	47806945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_47783494_47790926_47791124_47798610_47801156_47803419_47803686_47804909_47805028_47805617_47805708_47806203_47806359_47806451_47806652_47806778
transcript_115129.known	chr2	+	4324	13	NNC	ENSG00000116062.18	novel	4265	10	NA	NA	0	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	514.920294533263	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATTTTTCCATTTTCTTT	47783053	False	NA	29	True	AATAAA	-19	NA	47783081	47806952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_47783494_47790926_47791124_47795893_47796064_47798610_47801156_47803419_47803629_47803629_47803679_47804901_47805028_47805617_47805708_47806203_47806308_47806309_47806346_47806346_47806359_47806451_47806652_47806778
transcript_115131.known	chr2	+	491	3	FSM	ENSG00000116062.18	ENST00000420813.5	491	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	335	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGCCAGAAGAGGAAGAAGA	47783000	True	NA	29	True	NA	NA	NA	47783954	47796036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_47784106_47790926_47791124_47795893
transcript_115134.known	chr2	-	4760	23	FSM	ENSG00000138081.22	ENST00000403359.8	4760	23	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_3	24.8041918611411	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTCTGAATTTACCACC	-47903425	True	NA	-2	True	AATAAA	-17	NA	47906498	47806919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_47808248_47808328_47808428_47809157_47809267_47809599_47809708_47810315_47810427_47813233_47813378_47813790_47813868_47818778_47818865_47818955_47819079_47820361_47820457_47822217_47822304_47823142_47823361_47832348_47832487_47832571_47832679_47832768_47832881_47832963_47833071_47834578_47834712_47834787_47834872_47835871_47836002_47838858_47839004_47839418_47839501_47839641_47839770_47905488
transcript_115139.nic	chr2	-	3453	18	ISM	ENSG00000138081.22	ENST00000403359.8	4760	23	-63	5929	-63	0	5prime_fragment	FALSE	canonical	3	124	junction_17	23.6293466003875	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTCAACTGTGTTTGT	-47906551	False	NA	-8	True	AGTAAA	-19	NA	47906561	47812848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_47813378_47813790_47813868_47818778_47818865_47818955_47819079_47820361_47820457_47822217_47822304_47823142_47823361_47832348_47832487_47832571_47832679_47832768_47832881_47832963_47833071_47834578_47834712_47834787_47834872_47835871_47836002_47838858_47839004_47839418_47839501_47839641_47839770_47905488
transcript_115143.known	chr2	+	417	2	FSM	ENSG00000233230.2	ENST00000439870.1	417	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGAGCCTGTGTGTTGAGTC	47906069	False	NA	NA	False	NA	NA	NA	47906081	47907656	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_47906160_47907317
transcript_115144.nic	chr2	+	5339	7	NNC	ENSG00000170802.17	novel	5437	7	NA	NA	-1	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	25.7644242232493	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGCTTTCTCTGATCTT	48312180	True	NA	9	True	AATAAA	-19	NA	48314635	48379295	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_48314815_48346200_48346531_48346532_48346752_48359046_48359148_48362642_48362708_48373291_48373361_48374919
transcript_115145.known	chr2	+	5437	7	FSM	ENSG00000170802.17	ENST00000340553.8	5437	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	22.3084438423362	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGCTTTCTCTGATCTT	48312226	True	NA	9	True	AATAAA	-19	NA	48314681	48379295	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_48314815_48328560_48328703_48346200_48346752_48359046_48359148_48362642_48362708_48373291_48373361_48374919
transcript_115152.known	chr2	+	932	5	FSM	ENSG00000170802.17	ENST00000413569.5	932	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	9.23309265630969	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACTTCTATAGAACAAG	48312181	True	NA	NA	False	NA	NA	NA	48314636	48373328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_48314815_48346200_48346752_48359046_48359148_48362642_48362708_48373291
transcript_115160.known	chr2	+	3208	22	FSM	ENSG00000162869.16	ENST00000416913.5	3208	22	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	27.5493373131652	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCAGTCTCTCTATTAA	48440748	False	NA	26	True	AATAAA	-17	NA	48440768	48515385	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_48441011_48451007_48451077_48454555_48454742_48458125_48458228_48459753_48459919_48460094_48460154_48461137_48461233_48464936_48464990_48465492_48465643_48471086_48471189_48471278_48471368_48474682_48474820_48479923_48480017_48486630_48486759_48491017_48491171_48495678_48495772_48498492_48498736_48505563_48505597_48507268_48507386_48510014_48510114_48511339_48511469_48514714
transcript_115166.known	chr2	+	3173	22	FSM	ENSG00000162869.16	ENST00000294952.13	3173	22	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_16	15.3881009482538	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCAGTCTCTCTATTAAA	48440745	False	NA	27	True	AATAAA	-18	NA	48440765	48515386	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_48441011_48451007_48451077_48454594_48454742_48458125_48458228_48459753_48459919_48460094_48460154_48461137_48461233_48464936_48464990_48465492_48465643_48471086_48471189_48471278_48471368_48474682_48474820_48479923_48480017_48486630_48486759_48491017_48491171_48495678_48495772_48498492_48498736_48505563_48505597_48507268_48507386_48510014_48510114_48511339_48511469_48514714
transcript_11517.known	chr1	+	4831	6	FSM	ENSG00000134186.12	ENST00000370025.9	4831	6	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_2	60.3973509352852	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCATCAATCTTAAACTTT	108686134	True	NA	46	True	ATTAAA	-20	NA	108692309	108702928	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_108692868_108695701_108695771_108696042_108696195_108696276_108696338_108698603_108698828_108699161
transcript_115170.known	chr2	+	3137	21	FSM	ENSG00000162869.16	ENST00000281394.8	3137	21	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_17	30.8131059778141	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCAGTCTCTCTATTAAA	48440748	False	NA	27	True	AATAAA	-18	NA	48440768	48515386	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_48441011_48451007_48451077_48454594_48454742_48458125_48458228_48459753_48459919_48460094_48460154_48461137_48461233_48464936_48464990_48465492_48465643_48471086_48471189_48471278_48471368_48474682_48474820_48479923_48480017_48486630_48486759_48491017_48491171_48495678_48495772_48498492_48498736_48507268_48507386_48510014_48510114_48511339_48511469_48514714
transcript_115181.nic	chr2	+	1348	11	ISM	ENSG00000162869.16	ENST00000281394.8	3137	21	8	43936	8	0	5prime_fragment	FALSE	canonical	3	108	junction_6	15.9386323127174	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGTGATCTGCCTGAC	48437506	True	NA	13	True	AATAAA	-14	NA	48440776	48471450	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_48441011_48451007_48451077_48454594_48454742_48458125_48458228_48459753_48459919_48460094_48460154_48461137_48461233_48464936_48464990_48465492_48465643_48471086_48471189_48471278
transcript_115184.nic	chr2	-	1379	2	ISM	ENSG00000179915.25	ENST00000626899.1	2543	6	-51	108653	-26	-49	5prime_fragment	FALSE	canonical	3	12	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTAGATAAAGGAGGGCA	-51032519	True	NA	NA	False	AAGAAA	-5	NA	51032587	51028422	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_51029195_51031980
transcript_115188.known	chr2	-	2226	10	FSM	ENSG00000115239.24	ENST00000263634.8	2226	10	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_9	29.0287214094363	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGTTGCTTTTTTTTTTT	-53783147	True	NA	-5	True	ATTAAA	-16	NA	53786953	53669979	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_53670691_53693883_53694015_53700270_53700529_53714383_53714582_53716565_53716744_53728711_53728848_53729457_53729571_53750782_53750942_53765376_53765586_53786820
transcript_115192.known	chr2	-	1734	9	FSM	ENSG00000115239.24	ENST00000394717.3	1734	9	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_8	84.6174294988922	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-53783203	True	NA	NA	False	NA	NA	NA	53787009	53670318	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_53670691_53693883_53694015_53700270_53700529_53714383_53714582_53716565_53716744_53728711_53728848_53729457_53729571_53750782_53750942_53786820
transcript_115197.nnic	chr2	-	1110	4	NNC	ENSG00000115239.24	novel	623	3	NA	NA	-4	-4328	at_least_one_novel_splicesite	TRUE	canonical	3	10	junction_1	106.728107304912	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTTCTCTGTGTGTGTC	NA	False	NA	-4	True	NA	NA	NA	53787013	53733788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_53734338_53750782_53750942_53765376_53765586_53786820
transcript_115198.known	chr2	+	1309	3	FSM	ENSG00000143942.5	ENST00000295304.5	1309	3	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_2	16	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTAGTCTGTCATTCAC	53765441	True	NA	21	True	CATAAA	-28	NA	53767803	53775196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_53768022_53771906_53771943_53774141
transcript_115202.known	chr2	+	2446	14	FSM	ENSG00000068912.15	ENST00000185150.9	2446	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	104.469694934767	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTGTCATGTAGTCAATG	53779770	True	NA	4	True	AATAAA	-14	NA	53787043	53818796	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_53787373_53794344_53794450_53795932_53796014_53797514_53797593_53797731_53797796_53799046_53799082_53801396_53801621_53801712_53801843_53808298_53808461_53809213_53809274_53812948_53813074_53814542_53814621_53814859_53814936_53817897
transcript_115204.known	chr2	+	1756	13	FSM	ENSG00000068912.15	ENST00000405123.7	1756	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	133.814859663143	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGATTCCAAAATAAATCTC	53779806	True	NA	72	True	TATAAA	-28	NA	53787079	53818220	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_53787373_53794344_53794450_53795932_53796014_53797514_53797593_53797731_53797796_53799046_53799082_53801396_53801621_53801712_53801843_53808298_53808461_53809213_53809274_53812948_53813074_53814859_53814936_53817897
transcript_115206.known	chr2	+	2271	13	FSM	ENSG00000068912.15	ENST00000378239.5	2271	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	129.508043508244	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTATTAAATTTCTTTATT	53779806	True	NA	27	True	AATAAA	-37	NA	53787079	53818819	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_53787373_53794344_53794450_53795932_53796014_53797514_53797593_53797731_53797796_53799046_53799082_53801396_53801621_53801712_53801843_53809213_53809274_53812948_53813074_53814542_53814621_53814859_53814936_53817897
transcript_115207.nic	chr2	+	695	5	ISM	ENSG00000068912.15	ENST00000690769.1	2759	8	-15	5737	-3	1544	5prime_fragment	FALSE	canonical	3	330	junction_4	21.6491916708223	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGTCTACCCAGTGAT	53779732	True	NA	NA	False	AAAAAG	-1	NA	53787005	53797795	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_53787373_53794344_53794450_53795932_53796014_53797514_53797593_53797731
transcript_115208.nic	chr2	+	433	2	FSM	ENSG00000068912.15	ENST00000494373.2	2214	2	-60	1841	-3	-1841	multi-exon	FALSE	canonical	3	365	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATGCATACTTCCCCT	53779732	True	NA	NA	False	TATAAA	-43	NA	53787005	53794410	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_53787373_53794344
transcript_115209.known	chr2	-	2094	2	FSM	ENSG00000119737.6	ENST00000394705.3	2094	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGCCTCAGTCTTTTGT	-53859749	True	NA	NA	False	NA	NA	NA	53859967	53852911	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_53854866_53859827
transcript_115210.known	chr2	-	7250	47	FSM	ENSG00000068878.15	ENST00000404125.6	7250	47	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_41	49.4277699511524	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGCTTTTGTCTTCAT	-53969564	True	NA	-4	True	AATAAA	-15	NA	53970993	53864068	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_53865574_53866084_53866224_53866746_53866881_53869375_53869539_53874338_53874495_53875626_53875756_53885689_53885776_53887258_53887468_53887857_53887990_53888720_53888813_53890103_53890209_53892807_53892961_53893673_53893800_53895006_53895077_53895582_53895737_53896803_53896886_53897869_53898000_53898300_53898355_53899880_53900018_53901349_53901560_53904024_53904157_53906597_53906694_53906805_53906869_53908319_53908419_53908509_53908566_53908783_53908841_53910074_53910131_53919150_53919247_53920192_53920351_53920888_53921105_53922516_53922585_53923048_53923119_53923320_53923420_53925538_53925690_53925958_53926024_53927393_53927484_53928116_53928304_53931834_53932101_53932667_53932761_53934604_53934728_53936086_53936162_53936763_53936828_53937390_53937541_53939955_53940001_53948420_53948538_53949142_53949284_53970542
transcript_115213.known	chr2	-	1422	7	FSM	ENSG00000068878.15	ENST00000476586.5	1422	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	74.8570860595931	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGCTGTTTTTTCCCTG	-53887272	True	NA	-11	True	AATAAA	-23	NA	53887316	53864860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_53865574_53866084_53866224_53866746_53866881_53869375_53869539_53875626_53875756_53885689_53885776_53887258
transcript_115215.known	chr2	+	1262	7	FSM	ENSG00000170634.13	ENST00000607452.6	1262	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	21.2661703181367	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGTTAATGTGAACATT	53970059	True	NA	NA	False	CATAAA	-26	NA	53971112	54305300	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_53971322_53973712_53973811_54050957_54051051_54057238_54057361_54135452_54135470_54138638_54138749_54304687
transcript_115219.known	chr2	+	993	4	FSM	ENSG00000170634.13	ENST00000394666.7	993	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	6.18241233033047	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGTTAATGTGAACATT	54115452	False	NA	NA	False	CATAAA	-26	NA	54115503	54305300	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_54115757_54135452_54135470_54138638_54138749_54304687
transcript_115220.nic	chr2	+	291	2	ISM	ENSG00000170634.13	ENST00000606082.5	713	3	245	1612	-25	-1612	5prime_fragment	FALSE	canonical	3	74	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	53970029	True	NA	16	True	AATAAA	-22	NA	53971082	53973764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_53971322_53973712
transcript_115226.nic	chr2	+	6801	28	ISM	ENSG00000115306.16	ENST00000333896.5	9075	31	-462	6363	-462	-4345	5prime_fragment	FALSE	canonical	3	374	junction_1	138.125467307057	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAAGAAATGATCGACA	54557892	True	NA	26	True	NA	NA	NA	54557931	54655945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_54558888_54599091_54599244_54612160_54612335_54616206_54616299_54617607_54617689_54618077_54618194_54621399_54621513_54622299_54622488_54623478_54623597_54624803_54624963_54625931_54626235_54628096_54628251_54628932_54629804_54629891_54630030_54630854_54631612_54632565_54632769_54637712_54637804_54642982_54643130_54644322_54644587_54645228_54645454_54645927_54646018_54646193_54646476_54647130_54647262_54648985_54649191_54649614_54649990_54653608_54653854_54655069_54655209_54655913
transcript_115229.nic	chr2	+	4805	18	ISM	ENSG00000115306.16	ENST00000333896.5	9075	31	-462	19187	-462	13917	5prime_fragment	FALSE	canonical	3	374	junction_1	79.3183764602545	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCGAGAAGGTGAGTTAAAAC	54557892	True	NA	20	True	NA	NA	NA	54557931	54643121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_54558888_54599091_54599244_54612160_54612335_54616206_54616299_54617607_54617689_54618077_54618194_54621399_54621513_54622299_54622488_54623478_54623597_54624803_54624963_54625931_54626235_54628096_54628251_54628932_54629804_54629891_54630030_54630854_54631612_54632565_54632769_54637712_54637804_54642982
transcript_115236.nic	chr2	+	1878	8	ISM	ENSG00000115306.16	ENST00000333896.5	9075	31	-625	39978	-625	-6874	5prime_fragment	FALSE	canonical	3	374	junction_1	41.3363505591752	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATTGAAAAGTATGAATCA	54557335	False	NA	NA	False	NA	NA	NA	54557768	54622330	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_54558888_54599091_54599244_54612160_54612335_54616206_54616299_54617607_54617689_54618077_54618194_54621399_54621513_54622299
transcript_115238.nic	chr2	+	1065	6	ISM	ENSG00000115306.16	ENST00000333896.5	9075	31	-15	44174	-15	-11070	5prime_fragment	FALSE	canonical	3	374	junction_1	48.3056932462417	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGCATTTAATCTGGCAG	54548432	True	NA	NA	False	ACTAAA	-28	NA	54558378	54618134	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_54558888_54599091_54599244_54612160_54612335_54616206_54616299_54617607_54617689_54618077
transcript_115240.nic	chr2	+	1542	4	ISM	ENSG00000115306.16	ENST00000333896.5	9075	31	-686	46066	-686	-12962	5prime_fragment	FALSE	canonical	3	374	junction_1	47.3943268991366	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGAAATCTGCCAAGGA	54557274	True	NA	NA	False	NA	NA	NA	54557707	54616242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_54558888_54599091_54599244_54612160_54612335_54616206
transcript_115241.known	chr2	+	3332	4	FSM	ENSG00000115306.16	ENST00000467371.1	3332	4	0	0	0	0	multi-exon	FALSE	canonical	3	911	junction_1	64.5032298932904	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACGGTGACTAGTTGTTG	54662879	False	NA	22	True	ATTAAA	-14	NA	54662900	54669674	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_54664692_54665914_54666089_54667603_54667647_54668350
transcript_115242.known	chr2	+	9075	31	FSM	ENSG00000115306.16	ENST00000333896.5	9075	31	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_1	151.715629459269	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCCTTGTTTTCTTGGTT	54548447	True	NA	5	True	ATTAAA	-20	NA	54558393	54662308	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_54558888_54599091_54599244_54612160_54612335_54616206_54616299_54617607_54617689_54618077_54618194_54621399_54621513_54622299_54622488_54623478_54623597_54624803_54624963_54625931_54626235_54628096_54628251_54628932_54629804_54629891_54630030_54630854_54631612_54632565_54632769_54637712_54637804_54642982_54643130_54644322_54644587_54645228_54645454_54645927_54646018_54646193_54646476_54647130_54647262_54648985_54649191_54649614_54649990_54653608_54653854_54655069_54655209_54655913_54655999_54657849_54658047_54659153_54659267_54659935
transcript_115243.known	chr2	-	4697	9	FSM	ENSG00000115310.19	ENST00000337526.11	4697	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	519.352225734135	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTTTGGTATTTTCATT	-55038537	True	NA	-4	True	AATAAA	-17	NA	55050451	54972188	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_54973199_54973562_54973622_54973820_54973868_54974694_54974765_54982514_54982654_54987490_54987699_55025085_55027486_55028163_55028221_55049744
transcript_115247.known	chr2	-	2390	8	FSM	ENSG00000115310.19	ENST00000357732.8	2390	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	492.078308020674	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTTTGGTATTTTCATT	-55038630	True	NA	-4	True	AATAAA	-17	NA	55050544	54972188	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_54973199_54973562_54973622_54973820_54973868_54974694_54974765_54982514_54982654_54987490_54987699_55028163_55028221_55049744
transcript_115254.known	chr2	-	2333	7	FSM	ENSG00000115310.19	ENST00000317610.11	2333	7	0	0	0	0	multi-exon	FALSE	canonical	3	921	junction_6	100.661837632519	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTTTGGTATTTTCATT	-55038630	True	NA	-4	True	AATAAA	-17	NA	55050544	54972188	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_54973199_54973562_54973622_54973820_54973868_54974694_54974765_54982514_54982654_54987490_54987699_55049744
transcript_115269.nic	chr2	-	1775	3	ISM	ENSG00000115310.19	ENST00000337526.11	4697	9	-125	54411	22	607	5prime_fragment	FALSE	canonical	0	0	junction_1	51	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGCCCAAATAGTAACAG	-55050566	False	NA	NA	False	AATAGA	-7	NA	55050576	55026599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_55027486_55028163_55028221_55049744
transcript_11527.known	chr1	+	2043	5	FSM	ENSG00000134186.12	ENST00000467302.5	2043	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	159.474919658233	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCATTTAGACATGGAGAA	108686151	True	NA	NA	False	NA	NA	NA	108692326	108697504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_108692868_108693589_108693643_108695701_108695771_108696042_108696195_108696276
transcript_115273.known	chr2	+	705	6	FSM	ENSG00000143947.15	ENST00000402285.7	705	6	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_1	6678.41612959241	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAGACATGAACTAAC	55231870	False	NA	7	True	NA	NA	NA	55231902	55235588	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_55232109_55232807_55232873_55233362_55233418_55234118_55234205_55234830_55234963_55235427
transcript_115274.known	chr2	+	785	6	FSM	ENSG00000143947.15	ENST00000272317.11	785	6	0	0	0	0	multi-exon	FALSE	canonical	1	5833	junction_3	4356.5800072993	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGTTTGTGTTTCTGTCC	55014735	True	NA	10	True	AATATA	-2	NA	55232687	55235853	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_55232709_55232807_55232873_55233362_55233418_55234118_55234205_55234830_55234963_55235427
transcript_115276.known	chr2	+	580	5	FSM	ENSG00000143947.15	ENST00000478196.6	580	5	0	0	0	0	multi-exon	FALSE	canonical	1	5833	junction_3	3305.98491375868	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTTCAGGTCTTTACCT	55014736	True	NA	NA	False	TTTAAA	-8	NA	55232688	55235184	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_55232709_55232807_55232873_55233362_55233418_55234118_55234205_55234830
transcript_115278.nic	chr2	+	1173	5	NIC	ENSG00000143947.15	novel	785	6	NA	NA	1	0	intron_retention	FALSE	canonical	1	5833	junction_3	4698.53259007533	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTTGGGTTTTATTG	55014729	True	NA	28	True	AATAAA	-16	NA	55232681	55235609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_55232709_55232807_55232873_55233362_55233418_55234118_55234963_55235427
transcript_115289.known	chr2	-	2536	16	FSM	ENSG00000085760.15	ENST00000263629.9	2536	16	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_15	32.4293419949006	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCACTACTACTGGCCAAAA	-55266688	True	NA	5	True	ATTAAA	-42	NA	55269231	55236594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_55236821_55237287_55237429_55240010_55240176_55242939_55243081_55243415_55243669_55244028_55244234_55246336_55246462_55249394_55249535_55252476_55252654_55254040_55254202_55254653_55254826_55262315_55262428_55263639_55263866_55267568_55267636_55268577_55268740_55269168
transcript_1153.nic	chr1	-	1087	9	ISM	ENSG00000248333.9	ENST00000341832.11	2992	20	-84	6547	-76	0	5prime_fragment	FALSE	canonical	3	85	junction_5	23.0403857389585	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGGAGGAAGGGAGCACCA	-1659070	False	NA	NA	False	NA	NA	NA	1659088	1641771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_1641821_1641905_1642002_1642385_1642509_1645125_1645263_1649498_1649638_1652438_1652567_1655368_1655485_1657374_1657499_1658913
transcript_11530.nic	chr1	+	2031	4	ISM	ENSG00000134186.12	ENST00000370022.9	1591	5	-38	0	-24	0	intron_retention	TRUE	canonical	3	246	junction_2	66.9527196360735	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCATTTAGACATGGAGAA	NA	False	NA	NA	False	NA	NA	NA	108692285	108697504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_108692868_108695701_108695771_108696042_108696195_108696276
transcript_115303.nic	chr2	-	2290	15	ISM	ENSG00000085760.15	ENST00000263629.9	2536	16	-17	730	-5	-704	5prime_fragment	FALSE	canonical	3	140	junction_14	30.5768519888987	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAACTAACCCGTAATGG	-55266705	True	NA	NA	False	AAAACA	-8	NA	55269248	55237324	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_55237429_55240010_55240176_55242939_55243081_55243415_55243669_55244028_55244234_55246336_55246462_55249394_55249535_55252476_55252654_55254040_55254202_55254653_55254826_55262315_55262428_55263639_55263866_55267568_55267636_55268577_55268740_55269168
transcript_11531.known	chr1	+	2489	19	FSM	ENSG00000116266.11	ENST00000370008.4	2489	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	73.6253445358641	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTCTGGTTTGTGTTTTC	108742256	True	NA	1	True	AATAAA	-17	NA	108746673	108809523	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_108746787_108752256_108752307_108753062_108753145_108756689_108756767_108758509_108758589_108759984_108760086_108772664_108772820_108776332_108776424_108779285_108779411_108782421_108782518_108782648_108782707_108793581_108793648_108794826_108794908_108796233_108796373_108796619_108796727_108798144_108798238_108800219_108800306_108807400_108807550_108808782
transcript_115319.nic	chr2	-	1841	12	ISM	ENSG00000085760.15	ENST00000263629.9	2536	16	-17	6860	-5	-3444	5prime_fragment	FALSE	canonical	3	140	junction_11	28.320771806264	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAAGAGATTCAAATGTA	-55266705	True	NA	NA	False	AAGAAA	-33	NA	55269248	55243454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_55243669_55244028_55244234_55246336_55246462_55249394_55249535_55252476_55252654_55254040_55254202_55254653_55254826_55262315_55262428_55263639_55263866_55267568_55267636_55268577_55268740_55269168
transcript_115321.nic	chr2	-	1731	12	ISM	ENSG00000085760.15	ENST00000263629.9	2536	16	-35	6988	-23	-3572	5prime_fragment	FALSE	canonical	3	140	junction_11	28.320771806264	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCGAAAGGAACACAAAGAAG	-55266723	True	NA	NA	False	AATAGA	-7	NA	55269266	55243582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_55243669_55244028_55244234_55246336_55246462_55249394_55249535_55252476_55252654_55254040_55254202_55254653_55254826_55262315_55262428_55263639_55263866_55267568_55267636_55268577_55268740_55269168
transcript_115334.nic	chr2	-	534	4	ISM	ENSG00000085760.15	ENST00000263629.9	2536	16	-23	27052	-11	0	5prime_fragment	FALSE	canonical	3	140	junction_3	11.8415464455544	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGGTAGTTACAGATT	-55266711	True	NA	NA	False	GGGGCT	-30	NA	55269254	55263646	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_55263866_55267568_55267636_55268577_55268740_55269168
transcript_115335.known	chr2	-	583	4	FSM	ENSG00000085760.15	ENST00000441307.5	583	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	75.9078388573934	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGGTAGTTACAGATT	-55269316	False	NA	NA	False	GGGGCT	-30	NA	55269347	55263646	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_55263866_55267568_55267636_55268577_55268740_55269212
transcript_115337.known	chr2	-	2221	13	FSM	ENSG00000085760.15	ENST00000394600.7	2221	13	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_9	26.1815244441996	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGTTGTTTGTTTGAAGG	-55263837	False	NA	-21	True	ATTAAA	-16	NA	55263868	55236620	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_55236821_55237287_55237429_55240010_55240176_55242939_55243081_55243415_55243669_55244028_55244234_55246336_55246462_55249394_55249535_55252476_55252654_55254040_55254202_55254653_55254826_55262315_55262428_55263639
transcript_115339.nic	chr2	-	2848	15	ISM	ENSG00000115355.18	ENST00000644630.1	2971	16	-59	453	0	55	intron_retention	TRUE	canonical	3	37	junction_4	7.55557639719681	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGGATAGCTTTAAAAAT	-55417249	True	NA	NA	False	ATTAAA	-6	NA	55419895	55334788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_55335165_55336680_55336819_55339463_55339649_55343647_55343793_55344367_55344515_55346174_55346334_55349517_55349600_55355578_55355752_55362307_55362449_55363949_55364034_55372451_55372511_55374813_55374884_55388777_55388887_55418815_55418917_55419016
transcript_115340.nic	chr2	-	2813	15	ISM	ENSG00000115355.18	ENST00000644630.1	2971	16	-79	508	-20	0	intron_retention	FALSE	canonical	3	37	junction_4	7.55557639719681	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCTTAGAACAAGAAAATTC	-55417269	True	NA	NA	False	TTTAAA	-23	NA	55419915	55334843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_55335165_55336680_55336819_55339463_55339649_55343647_55343793_55344367_55344515_55346174_55346334_55349517_55349600_55355578_55355752_55362307_55362449_55363949_55364034_55372451_55372511_55374813_55374884_55388777_55388887_55418815_55418917_55419016
transcript_115341.nic	chr2	-	2719	15	ISM	ENSG00000115355.18	ENST00000644630.1	2971	16	-40	563	2	-55	intron_retention	FALSE	canonical	3	37	junction_4	7.55557639719681	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAATTATTACAGAAAAAAA	-55417230	True	NA	NA	False	AAAAAG	-5	NA	55419876	55334898	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_55335165_55336680_55336819_55339463_55339649_55343647_55343793_55344367_55344515_55346174_55346334_55349517_55349600_55355578_55355752_55362307_55362449_55363949_55364034_55372451_55372511_55374813_55374884_55388777_55388887_55418815_55418917_55419016
transcript_115342.nic	chr2	-	2698	15	ISM	ENSG00000115355.18	ENST00000644630.1	2971	16	-110	654	-51	0	intron_retention	FALSE	canonical	3	37	junction_4	7.55557639719681	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GACAAATTAAAAAAGAATTG	NA	False	NA	NA	False	AAGAAA	-37	NA	55419946	55334989	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_55335165_55336680_55336819_55339463_55339649_55343647_55343793_55344367_55344515_55346174_55346334_55349517_55349600_55355578_55355752_55362307_55362449_55363949_55364034_55372451_55372511_55374813_55374884_55388777_55388887_55418815_55418917_55419016
transcript_115343.known	chr2	-	2316	13	FSM	ENSG00000115355.18	ENST00000647517.1	2316	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	16.2069943748576	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAAGCAAGATTGAATTTG	-55417169	True	NA	NA	False	AAAAAG	-44	NA	55419815	55335015	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_55335165_55336680_55336819_55339463_55339649_55343647_55343793_55344367_55344515_55346174_55346334_55349517_55349600_55355578_55355752_55372451_55372511_55374813_55374884_55388777_55388887_55418815_55418917_55419016
transcript_115345.nic	chr2	-	2363	13	ISM	ENSG00000115355.18	ENST00000644630.1	2971	16	-107	5147	-48	-2767	intron_retention	FALSE	canonical	3	37	junction_2	6.69732533677935	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAGGCTCAGTAAAAAGG	-55417297	False	NA	NA	False	AAAAAG	-5	NA	55419943	55339482	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_55339649_55343647_55343793_55344367_55344515_55346174_55346334_55349517_55349600_55355578_55355752_55362307_55362449_55363949_55364034_55372451_55372511_55374813_55374884_55388777_55388887_55418815_55418917_55419016
transcript_115347.nic	chr2	-	2165	12	ISM	ENSG00000115355.18	ENST00000644630.1	2971	16	-206	9443	-147	0	intron_retention	FALSE	canonical	3	37	junction_1	6.42952898548615	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGAAAAAAGATTGAAGAAT	NA	False	NA	-21	True	AATAAA	-19	NA	55420042	55343778	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_55343793_55344367_55344515_55346174_55346334_55349517_55349600_55355578_55355752_55362307_55362449_55363949_55364034_55372451_55372511_55374813_55374884_55388777_55388887_55418815_55418917_55419016
transcript_115349.nic	chr2	-	1986	11	ISM	ENSG00000115355.18	ENST00000644630.1	2971	16	-40	10031	2	97	intron_retention	FALSE	canonical	3	42	junction_6	5.33010318849457	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTTTAAGAGGTAGATC	-55417230	True	NA	NA	False	AAAAAG	-43	NA	55419876	55344366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_55344515_55346174_55346334_55349517_55349600_55355578_55355752_55362307_55362449_55363949_55364034_55372451_55372511_55374813_55374884_55388777_55388887_55418815_55418917_55419016
transcript_115351.known	chr2	-	1270	2	FSM	ENSG00000115355.18	ENST00000642784.1	1270	2	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAAAGCCTGATGAGATG	-55417015	False	NA	NA	False	AGTAAA	-20	NA	55419661	55418291	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_55418917_55419016
transcript_115352.known	chr2	+	1184	10	FSM	ENSG00000163001.12	ENST00000349456.9	1184	10	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_6	17.4100864762675	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTTAGTTTCGAACACT	55516935	True	NA	15	True	AATAAA	-21	NA	55519717	55545079	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_55519917_55522101_55522167_55523720_55523823_55528877_55528993_55533872_55533961_55535711_55535764_55537482_55537586_55543937_55544075_55544219_55544370_55544906
transcript_115355.nic	chr2	+	1133	9	ISM	ENSG00000163001.12	ENST00000349456.9	1184	10	-146	734	-32	51	5prime_fragment	FALSE	canonical	3	182	junction_6	14.4481832767999	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAACCCACTGGGGAGGT	NA	False	NA	18	True	ACTAAA	-25	NA	55519571	55544345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_55519917_55522101_55522167_55523720_55523823_55528877_55528993_55533872_55533961_55535711_55535764_55537482_55537586_55543937_55544075_55544219
transcript_115356.known	chr2	+	759	6	FSM	ENSG00000163001.12	ENST00000403007.4	759	6	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_3	14.0769314838142	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTATGTATGTCGTGCAT	55516948	True	NA	NA	False	AATATA	-7	NA	55519730	55535914	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_55519917_55522101_55522167_55523720_55523823_55528877_55528993_55533872_55533961_55535711
transcript_115364.known	chr2	-	5506	17	FSM	ENSG00000275052.5	ENST00000616407.2	5506	17	0	0	0	0	multi-exon	FALSE	canonical	1	88	junction_15	84.773572496091	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGTTTTAATCACTA	-55611202	True	NA	-1	True	AATAAA	-18	NA	55617622	55547291	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_55550007_55558774_55558969_55564312_55564498_55564901_55565042_55568193_55568364_55573618_55573778_55577314_55577357_55578246_55578343_55579678_55579782_55581566_55581699_55585050_55585168_55586617_55586735_55588878_55588957_55598415_55599040_55603977_55604077_55615450_55615507_55617143
transcript_115366.nnic	chr2	-	4291	16	NNC	ENSG00000275052.5	novel	4310	16	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	53	junction_3	85.4981221366229	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGATGTTTGTGTTTGG	-55611190	True	NA	NA	False	ATTAAA	-20	NA	55617610	55548377	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_55550007_55558774_55558969_55564312_55564477_55564901_55565042_55568193_55568364_55573618_55573778_55577314_55577357_55579678_55579782_55581566_55581699_55585050_55585168_55586617_55586735_55588878_55588957_55598415_55599040_55603977_55604077_55615450_55615507_55617143
transcript_115370.known	chr2	-	4310	16	FSM	ENSG00000275052.5	ENST00000616288.4	4310	16	0	0	0	0	multi-exon	FALSE	canonical	1	88	junction_14	68.9110215342139	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGATGTTTGTGTTTGG	-55611188	True	NA	NA	False	ATTAAA	-20	NA	55617608	55548377	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_55550007_55558774_55558969_55564312_55564498_55564901_55565042_55568193_55568364_55573618_55573778_55577314_55577357_55579678_55579782_55581566_55581699_55585050_55585168_55586617_55586735_55588878_55588957_55598415_55599040_55603977_55604077_55615450_55615507_55617143
transcript_115371.nnic	chr2	-	4017	16	NNC	ENSG00000275052.5	novel	4310	16	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	1	26	junction_12	95.333426573381	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGATGTTTGTGTTTGG	-55611183	True	NA	NA	False	ATTAAA	-20	NA	55617603	55548377	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_55550007_55558774_55558969_55564312_55564498_55564901_55565042_55568193_55568364_55573618_55573778_55577314_55577357_55579678_55579782_55581566_55581699_55585050_55585168_55586617_55586735_55588878_55588957_55598703_55599040_55603977_55604077_55615450_55615507_55617143
transcript_115377.known	chr2	-	5243	15	FSM	ENSG00000275052.5	ENST00000611717.4	5243	15	0	0	0	0	multi-exon	FALSE	canonical	1	18	junction_5	98.4664295844124	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGTTTTAATCACTA	-55611194	True	NA	-1	True	AATAAA	-18	NA	55617614	55547291	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_55550007_55558774_55558969_55564312_55564498_55564901_55565042_55568193_55568364_55577314_55577357_55579678_55579782_55581566_55581699_55585050_55585168_55586617_55586735_55588878_55588957_55598415_55599040_55603977_55604077_55615450_55615507_55617143
transcript_115381.nic	chr2	-	2504	15	ISM	ENSG00000275052.5	ENST00000616407.2	5506	17	-10	17124	-10	3613	5prime_fragment	FALSE	canonical	1	88	junction_13	89.6249555261325	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATGAAGAAGAGGAAGGAAA	-55617478	False	NA	NA	False	AAGAAA	-15	NA	55617632	55564415	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_55564498_55564901_55565042_55568193_55568364_55573618_55573778_55577314_55577357_55578246_55578343_55579678_55579782_55581566_55581699_55585050_55585168_55586617_55586735_55588878_55588957_55598415_55599040_55603977_55604077_55615450_55615507_55617143
transcript_115384.nic	chr2	-	2668	14	ISM	ENSG00000275052.5	ENST00000616288.4	4310	16	-201	15955	-187	3696	5prime_fragment	FALSE	canonical	1	88	junction_12	73.1030722445892	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTTATGGAGACTAAAAAAG	-55617655	False	154	NA	False	NA	NA	NA	55617809	55564332	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_55564498_55564901_55565042_55568193_55568364_55573618_55573778_55577314_55577357_55579678_55579782_55581566_55581699_55585050_55585168_55586617_55586735_55588878_55588957_55598415_55599040_55603977_55604077_55615450_55615507_55617143
transcript_115386.nic	chr2	-	2585	14	ISM	ENSG00000275052.5	ENST00000616288.4	4310	16	-201	16038	-187	3613	5prime_fragment	FALSE	canonical	1	88	junction_12	73.1030722445892	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATGAAGAAGAGGAAGGAAA	-55617655	False	154	NA	False	AAGAAA	-15	NA	55617809	55564415	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_55564498_55564901_55565042_55568193_55568364_55573618_55573778_55577314_55577357_55579678_55579782_55581566_55581699_55585050_55585168_55586617_55586735_55588878_55588957_55598415_55599040_55603977_55604077_55615450_55615507_55617143
transcript_115398.nic	chr2	-	2176	2	ISM	ENSG00000275052.5	ENST00000612688.1	2981	3	1071	-179	-187	179	3prime_fragment	FALSE	canonical	3	353	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAAGATGTTTCCTATAC	-55617655	False	154	-4	True	ATTAAA	-21	NA	55617809	55613996	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_55615507_55617143
transcript_115399.known	chr2	-	2981	3	FSM	ENSG00000275052.5	ENST00000612688.1	2981	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	174	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTATTATTACAAAGTCT	-55618726	True	NA	NA	False	AATAAA	-17	NA	55618880	55614175	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_55615507_55617143_55617979_55618065
transcript_11540.known	chr1	+	7152	15	FSM	ENSG00000121957.15	ENST00000264126.9	7152	15	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_14	13.7137276672177	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAATGTTGAAGTTGGCA	108874907	True	NA	NA	False	AGTAAA	-23	NA	108876984	108934545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_108877229_108885274_108885579_108896863_108897086_108897491_108897628_108897958_108898102_108898641_108898766_108898878_108898995_108901789_108901946_108903125_108903235_108904124_108904255_108914337_108914409_108918612_108918790_108922416_108922577_108923999_108924215_108929700
transcript_115400.nic	chr2	-	2657	2	ISM	ENSG00000275052.5	ENST00000612688.1	2981	3	-18	1979	-18	-1979	5prime_fragment	FALSE	canonical	3	5	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAATGGCTTGAAGTGGTCA	-55618744	True	NA	-2	True	AATAAA	-17	NA	55618898	55616154	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_55617979_55618065
transcript_115401.known	chr2	+	465	1	FSM	ENSG00000272606.1	ENST00000608113.1	465	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGGAAAGTAAGTCTGCT	55617616	True	NA	30	True	AATACA	-22	NA	55617908	55618373	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_55617900_55618400
transcript_115404.known	chr2	-	4549	28	FSM	ENSG00000138035.15	ENST00000447944.7	4549	28	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_17	34.4977285986143	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCGACTATTATTTAATAA	-55689059	True	NA	0	True	ATTAAA	-23	NA	55693844	55634060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_55636393_55637551_55637600_55640626_55640706_55643157_55643214_55643318_55643426_55644636_55644721_55645348_55645433_55646258_55646323_55646414_55646487_55647346_55647454_55654899_55654954_55656130_55656221_55656304_55656372_55660156_55660194_55661955_55662027_55666990_55667094_55667861_55667959_55671318_55671377_55671994_55672047_55672892_55673080_55679681_55679796_55680711_55680760_55680854_55680919_55683784_55683835_55684942_55685049_55686369_55686445_55687644_55687706_55693662
transcript_115417.known	chr2	-	3596	27	FSM	ENSG00000138035.15	ENST00000260604.8	3596	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	87.2935264685395	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGAATGTGTAATCTTTT	-55689057	True	NA	2	True	AGTAAA	-20	NA	55693842	55635093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_55636393_55637551_55637600_55640626_55640706_55643157_55643214_55643318_55643413_55644636_55644721_55645348_55645433_55646258_55646323_55646414_55646487_55647346_55647454_55654899_55654954_55656130_55656221_55656304_55656372_55660156_55660194_55661955_55662027_55666990_55667094_55667861_55667959_55671318_55671377_55671994_55672047_55672892_55673080_55679681_55679796_55680711_55680919_55683784_55683835_55684942_55685049_55686369_55686445_55687644_55687706_55693662
transcript_115434.nic	chr2	-	660	8	ISM	ENSG00000138035.15	ENST00000415374.5	3308	29	-35	45167	5	-54	5prime_fragment	FALSE	canonical	3	396	junction_6	24.9955098008439	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTCTAGTACTTTAAAT	-55689073	True	NA	NA	False	AAGAAA	-6	NA	55693858	55679735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_55679796_55680711_55680760_55680854_55680919_55683784_55683835_55684942_55685049_55686369_55686445_55687644_55687706_55693662
transcript_115438.known	chr2	-	2708	12	FSM	ENSG00000115380.20	ENST00000355426.8	2708	12	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_10	40.7061633605673	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTATCTTTGGAGGTTTTT	-55921399	True	NA	-4	True	AATAAA	-25	NA	55923782	55865966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_55867235_55870719_55870916_55870999_55871124_55874945_55875066_55876622_55876743_55877745_55877866_55881611_55881735_55917664_55918052_55918218_55918268_55922359_55922448_55922898_55922940_55923710
transcript_115440.known	chr2	-	3024	11	FSM	ENSG00000115380.20	ENST00000394555.6	3024	11	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_10	18.7072178583562	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTATCTTTGGAGGTTTTT	NA	False	NA	-4	True	AATAAA	-25	NA	55924139	55865966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_55867235_55870719_55870916_55870999_55871124_55874945_55875066_55876622_55876743_55877745_55877866_55881611_55881735_55917664_55918052_55918218_55918268_55922359_55922448_55923710
transcript_115453.nic	chr2	+	1816	14	NIC	ENSG00000028116.18	novel	1773	13	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_12	71.5812113790009	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTCATAGAATAGTGTC	58043799	True	NA	8	True	AATAAA	-19	NA	58046811	58159871	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_58046869_58048826_58048968_58084088_58084139_58084880_58084951_58086338_58086427_58088340_58088447_58089630_58089724_58123100_58123234_58131807_58131929_58135140_58135200_58139665_58139833_58146315_58146475_58154753_58154803_58159348
transcript_115454.nic	chr2	+	1828	14	NIC	ENSG00000028116.18	novel	1773	13	NA	NA	-11	0	combination_of_known_junctions	TRUE	canonical	3	34	junction_12	70.3214091988775	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTCATAGAATAGTGTC	58043782	True	NA	8	True	AATAAA	-19	NA	58046794	58159871	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_58046869_58048826_58048968_58084088_58084139_58084880_58084951_58086338_58086427_58088340_58088447_58089630_58089724_58123100_58123234_58131807_58131929_58135140_58135200_58139665_58139833_58146315_58146475_58154758_58154803_58159348
transcript_115455.nic	chr2	+	1911	13	NIC	ENSG00000028116.18	novel	1773	13	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_1	48.0745948154185	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTCATAGAATAGTGTC	58046608	False	NA	8	True	AATAAA	-19	NA	58046620	58159871	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_58046822_58048826_58048968_58084088_58084139_58084880_58084951_58086338_58086427_58088340_58088447_58089630_58089724_58123100_58123234_58131807_58131929_58135140_58135200_58139665_58139833_58146315_58146475_58159348
transcript_115457.known	chr2	+	1773	13	FSM	ENSG00000028116.18	ENST00000340157.9	1773	13	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_11	25.844083784624	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTCATAGAATAGTGTC	58043793	True	NA	8	True	AATAAA	-19	NA	58046805	58159871	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_58046869_58048826_58048968_58084088_58084139_58084880_58084951_58086338_58086427_58088340_58088447_58089630_58089724_58123100_58123234_58131807_58131929_58135140_58135200_58139665_58139833_58146315_58146475_58159348
transcript_11547.nic	chr1	+	2465	14	ISM	ENSG00000121957.15	ENST00000642355.1	5609	16	-7	9974	-5	0	5prime_fragment	FALSE	canonical	3	107	junction_1	11.7155639159975	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTTTCAGCTGCTATTC	108876941	True	NA	10	True	AGTAAA	-18	NA	108876973	108924361	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_108877229_108885274_108885579_108896863_108897086_108897491_108897628_108897958_108898102_108898641_108898766_108898878_108898995_108901789_108901946_108903125_108903235_108904124_108904255_108914337_108914409_108918612_108918790_108922416_108922577_108923999
transcript_115471.nic	chr2	-	1803	15	NIC	ENSG00000115392.12	novel	1658	14	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_7	164.526159448451	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTTTTTGCGTGTTATT	NA	False	NA	-7	True	AATAAA	-14	NA	58241425	58159246	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_58159801_58160107_58160180_58161521_58161639_58162865_58162948_58163028_58163075_58163433_58163518_58165723_58165875_58194228_58194274_58198593_58198663_58204129_58204227_58221941_58222043_58226727_58226785_58229813_58229875_58232053_58232113_58241217
transcript_115472.known	chr2	-	1698	14	FSM	ENSG00000115392.12	ENST00000402135.7	1698	14	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_7	105.375631284653	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTTTTTGCGTGTTATT	-58235821	True	NA	-7	True	AATAAA	-14	NA	58241350	58159246	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_58159801_58160107_58160180_58161521_58161639_58162865_58162948_58163028_58163075_58163433_58163518_58165723_58165875_58198578_58198663_58204129_58204227_58221941_58222043_58226727_58226785_58229813_58229875_58232053_58232113_58241217
transcript_115479.known	chr2	-	849	10	FSM	ENSG00000115392.12	ENST00000403676.5	849	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_9	150.979354324023	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACATTTCGGTGAAGAGCT	-58235773	False	NA	NA	False	NA	NA	NA	58241302	58159754	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_58159801_58160107_58160180_58161521_58161639_58162865_58162948_58163028_58163075_58163433_58163518_58165723_58165875_58198593_58198663_58204129_58204227_58241217
transcript_115485.known	chr2	-	522	6	FSM	ENSG00000115392.12	ENST00000481670.2	522	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	185.833904333951	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAAGTGGTGTGCATGGA	-58235730	False	NA	-2	True	AATAAA	-16	NA	58241259	58213504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_58213707_58221941_58222043_58226727_58226785_58229813_58229875_58232053_58232113_58241217
transcript_115488.known	chr2	+	1268	6	FSM	ENSG00000233723.10	ENST00000429664.6	1268	6	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	3.49857113690718	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCACTATATGCCAAGTAAT	58428090	True	NA	85	True	AATAAA	-19	NA	58428337	58931156	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_58428465_58656649_58656712_58850429_58850607_58924544_58924627_58925610_58925910_58930635
transcript_115489.nnic	chr2	+	927	3	Antisense	novelGene_ENSG00000228590.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	5.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCTCAGGGATGTTTTC	60417595	True	NA	7	True	AATAAA	-44	NA	60417728	60424689	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr2_+_60417982_60419876_60420153_60424291
transcript_115494.known	chr2	-	4052	5	FSM	ENSG00000119866.22	ENST00000356842.9	4052	5	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	152.211201953076	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATACAGTGCTGTCTCGT	-60553561	False	NA	NA	False	AATAAA	-35	NA	60553571	60451145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_60452667_60460681_60462425_60468731_60468834_60545970_60546301_60553215
transcript_115495.known	chr2	-	1519	5	FSM	ENSG00000119866.22	ENST00000489516.7	1519	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	174.837603220817	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGGATTTGAATTTGTC	-60550915	False	2227	NA	False	AATATA	-18	NA	60550925	60451780	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_60452667_60462281_60462425_60468731_60468834_60545970_60546301_60550867
transcript_115497.known	chr2	-	993	4	FSM	ENSG00000119866.22	ENST00000643459.1	993	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	175.473328141028	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCTATGCAAAGGTTACT	-60550897	False	2227	NA	False	NA	NA	NA	60550907	60461903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_60462425_60468731_60468834_60545970_60546301_60550867
transcript_115498.known	chr2	-	6102	4	FSM	ENSG00000119866.22	ENST00000642384.2	6102	4	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_1	31.0161248385416	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTAAGCTTCTTGTGTC	-60551427	True	NA	-6	True	AATAAA	-16	NA	60553654	60457193	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_60462425_60468731_60468834_60545970_60546301_60553215
transcript_1155.known	chr1	+	1248	8	FSM	ENSG00000189409.14	ENST00000356026.10	1248	8	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_4	20.2675975439637	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCCTCGCTCATTCTTG	1631011	True	NA	NA	False	GATAAA	-16	NA	1632172	1634654	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1632375_1632782_1632914_1632980_1633121_1633187_1633356_1633747_1633913_1633988_1634100_1634201_1634329_1634450
transcript_115501.known	chr2	+	7348	22	FSM	ENSG00000115421.13	ENST00000238714.8	7348	22	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_6	18.3795953113643	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGATGATTGAGTGATGTT	60754300	True	NA	NA	False	AATAAA	-17	NA	60756267	60802086	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_60756496_60760133_60760296_60761740_60761808_60768469_60768552_60768780_60768891_60770457_60770512_60771518_60771631_60775033_60775124_60779636_60779776_60780706_60780780_60781884_60782006_60782685_60782771_60783155_60783210_60786946_60787067_60787510_60787621_60791760_60791883_60792128_60792290_60793626_60793716_60793970_60794192_60794709_60794776_60794963_60795021_60797061
transcript_115508.nic	chr2	+	2287	20	ISM	ENSG00000115421.13	ENST00000238714.8	7348	22	-27	7317	-12	765	5prime_fragment	TRUE	canonical	3	112	junction_6	19.2951991215762	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTGGTAAATATATTAAT	60754273	True	NA	NA	False	AAAAAG	-5	NA	60756240	60794769	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_60756496_60760133_60760296_60761740_60761808_60768469_60768552_60768780_60768891_60770457_60770512_60771518_60771631_60775033_60775124_60779636_60779776_60780706_60780780_60781884_60782006_60782685_60782771_60783155_60783210_60786946_60787067_60787510_60787621_60791760_60791883_60792128_60792290_60793626_60793716_60793970_60794192_60794709
transcript_11551.known	chr1	-	2008	13	FSM	ENSG00000121940.17	ENST00000675508.1	2008	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	60.0533905972196	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTTGGGGATGAAGTCT	-108961175	True	NA	NA	False	AATAAA	-32	NA	108963484	108932498	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_108932502_108934624_108934943_108937076_108937419_108939635_108939783_108940044_108940143_108941404_108941499_108943474_108943616_108943835_108944058_108947610_108947719_108949819_108949922_108950308_108950439_108962308_108962470_108963342
transcript_115517.known	chr2	+	11255	11	FSM	ENSG00000162924.15	ENST00000295025.12	11255	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	2.62488094968134	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGCTGAAATTTTGTTG	60880588	True	NA	16	True	AATAAA	-17	NA	60881520	60931610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_60881851_60891682_60891826_60894396_60894546_60900991_60901084_60916876_60917018_60918190_60918296_60918393_60918607_60920040_60920110_60920382_60920479_60920573_60920643_60921762
transcript_115518.known	chr2	+	11108	10	FSM	ENSG00000162924.15	ENST00000394479.4	11108	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	2.3094010767585	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGAAATTTTGTTGCT	60880641	True	NA	18	True	AATAAA	-19	NA	60881573	60931612	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_60881851_60891682_60891826_60894396_60894546_60900991_60901084_60916876_60917018_60918190_60918296_60918393_60918607_60920040_60920110_60920573_60920643_60921762
transcript_115522.known	chr2	-	1820	18	FSM	ENSG00000162927.14	ENST00000407787.5	1820	18	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_17	3.28780908528991	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTATATTTTGTGTTAAAT	-61016944	True	NA	NA	False	NA	NA	NA	61017193	60942224	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_60942434_60945008_60945109_60948042_60948186_60952996_60953115_60953932_60953989_60954081_60954159_60955017_60955075_60960391_60960518_60961462_60961549_60962825_60962891_60965057_60965104_60965422_60965485_60967501_60967614_60971522_60971558_61006556_61006644_61008760_61009016_61011764_61011906_61017148
transcript_115524.nnic	chr2	+	2818	5	NNC	ENSG00000162928.9	novel	4472	4	NA	NA	-19	-264	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	51.09977984297	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTTCTTTTAATTTTTC	61014013	True	NA	6	True	AATAAA	-23	NA	61017700	61051726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_61017852_61031418_61032114_61045725_61045852_61048471_61049490_61050898
transcript_115529.known	chr2	+	4472	4	FSM	ENSG00000162928.9	ENST00000295030.6	4472	4	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	4.49691252107735	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGACTTTTTAAGATAAATT	61014032	True	NA	9	True	AATAAA	-17	NA	61017719	61051990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_61017852_61031418_61032114_61045725_61045852_61048471
transcript_115535.known	chr2	-	1227	3	FSM	ENSG00000162927.14	ENST00000398658.2	1227	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	6	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGAAAGATTTTTTC	-61016944	True	NA	0	True	AATAAA	-16	NA	61017193	61009847	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_61010889_61011764_61011906_61017148
transcript_115536.known	chr2	+	1108	3	FSM	ENSG00000162928.9	ENST00000401576.1	1108	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	16	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGGTGACTATTGTCCTT	61017530	False	NA	16	True	AATAAA	-30	NA	61017561	61019081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_61017616_61017695_61017852_61018183
transcript_115538.known	chr2	+	1533	2	FSM	ENSG00000162928.9	ENST00000444100.2	1533	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATTCTTCTTTATAGTGG	61017214	False	NA	2	True	AATAAA	-16	NA	61017224	61019067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_61017852_61018161
transcript_115539.known	chr2	+	1014	2	FSM	ENSG00000162928.9	ENST00000414712.2	1014	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTGGTGACTATTGTCCT	61014042	True	NA	15	True	AATAAA	-29	NA	61017729	61019080	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_61017852_61018188
transcript_115540.known	chr2	+	4578	22	FSM	ENSG00000162929.14	ENST00000402291.6	4578	22	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_21	24.2799246133308	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTTGGAAAGTCTCTTT	61063768	True	NA	7	True	AATAAA	-15	NA	61065870	61124280	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_61066028_61068848_61068986_61070341_61070501_61071605_61071793_61073457_61073552_61076919_61077159_61081451_61081511_61083153_61083315_61088158_61088246_61088357_61088469_61092463_61092588_61097699_61097853_61103852_61103999_61106562_61106663_61108316_61108350_61109196_61109297_61115978_61116071_61117356_61117386_61117466_61117541_61118027_61118117_61121184_61121277_61122125
transcript_115553.known	chr2	+	565	5	FSM	ENSG00000237651.8	ENST00000398622.3	565	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	18.7399973319102	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAGAAGAGGAGAACCAAAT	61144266	True	NA	NA	False	AAAACA	-15	NA	61145130	61163163	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_61145197_61157861_61158013_61159317_61159440_61162841_61162956_61163051
transcript_115558.known	chr2	+	879	4	FSM	ENSG00000237651.8	ENST00000426997.5	879	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	56.7861485458088	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATTTTTGTTTGTACAAA	61144203	True	NA	-12	True	AATAAA	-1	NA	61145067	61164808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_61145197_61162841_61162956_61163051_61163233_61164353
transcript_115562.known	chr2	+	423	4	FSM	ENSG00000237651.8	ENST00000489686.5	423	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	22.9540604009158	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAACAGAAGGGACATGGA	61144265	True	NA	NA	False	NA	NA	NA	61145129	61163142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_61145197_61157861_61158013_61162841_61162956_61163051
transcript_115564.known	chr2	+	726	3	FSM	ENSG00000237651.8	ENST00000464909.2	726	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	67	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTTGTTTGTACAAAT	61144243	True	NA	-11	True	AATAAA	-2	NA	61145107	61164809	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_61145197_61163051_61163233_61164353
transcript_115566.known	chr2	-	2532	2	FSM	ENSG00000212978.6	ENST00000420918.3	2532	2	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCACGGGTATACCAGTGGA	-61144147	True	NA	-19	True	AATAAA	-17	NA	61144950	61141591	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_61143946_61144772
transcript_115569.known	chr2	-	11675	80	FSM	ENSG00000115464.15	ENST00000398571.7	11675	80	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_66	143.333437421167	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTACATACGTTGCTT	-61471056	False	NA	-11	True	ATTAAA	-21	NA	61471087	61187462	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_61188710_61188909_61189070_61190270_61190415_61190517_61190659_61192900_61192981_61203139_61203264_61204255_61204381_61204496_61204602_61206016_61206125_61206759_61206887_61208898_61208978_61211771_61211930_61214059_61214695_61220309_61220458_61221501_61221607_61222618_61222664_61223059_61223165_61223247_61223297_61227066_61227219_61228644_61228720_61228826_61228996_61229547_61229634_61232451_61232533_61235844_61235911_61236025_61236074_61236160_61236237_61236324_61236390_61241559_61241656_61241765_61241820_61245209_61245289_61246323_61246478_61248510_61248684_61256383_61256479_61256872_61256951_61257051_61257109_61257203_61257351_61259710_61259777_61265396_61265558_61265983_61266168_61278164_61278286_61278387_61278444_61280243_61280349_61281089_61281243_61283144_61283270_61283408_61283450_61284874_61284958_61288676_61288878_61293463_61293551_61294948_61295033_61295167_61295291_61296799_61296926_61300950_61301161_61301353_61301455_61311539_61311688_61311783_61311911_61314584_61314745_61314874_61314975_61317653_61317768_61319172_61319328_61325374_61325458_61331275_61331372_61333881_61333972_61339350_61339479_61339565_61339682_61343814_61344030_61347869_61348481_61348755_61348887_61349249_61349286_61350259_61350390_61350567_61350694_61370320_61370414_61370497_61370580_61378362_61378425_61380168_61380362_61383268_61383337_61394852_61395003_61395182_61395234_61405707_61406129_61420745_61420834_61470649
transcript_115572.known	chr2	+	1003	9	FSM	ENSG00000173209.23	ENST00000489653.6	1003	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	159.563809728271	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAAATTTATTATAAGGC	61174384	True	NA	-17	True	AATAAA	-35	NA	61177538	61186786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_61177619_61178980_61179172_61181319_61181406_61183546_61183663_61184711_61184801_61185501_61185619_61185979_61186082_61186445_61186498_61186616
transcript_115574.known	chr2	+	1509	8	FSM	ENSG00000173209.23	ENST00000642505.1	1509	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	158.806646650599	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCCCTAAATGGTTGAATT	61178367	False	NA	-34	True	AATAAA	-18	NA	61178377	61186769	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_61179172_61181319_61181406_61183546_61183663_61184711_61184801_61185501_61185619_61185979_61186082_61186445_61186498_61186616
transcript_115580.known	chr2	+	2813	7	FSM	ENSG00000173209.23	ENST00000642732.1	2813	7	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	137.401378773609	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAGCAATCAATCAATCAG	61174547	False	NA	-44	True	AATGAA	-34	NA	61177701	61187499	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_61179172_61181319_61181406_61183546_61183663_61184711_61184801_61185501_61185619_61186445_61186498_61186616
transcript_115583.nic	chr2	+	2375	7	NIC	ENSG00000173209.23	novel	2813	7	NA	NA	-59	0	intron_retention	FALSE	canonical	3	11	junction_5	155.253287673187	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTTTTTGTAAGCGGAAA	61177345	False	NA	4	True	ATTAAA	-16	NA	61177358	61186807	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_61179172_61181319_61181406_61184711_61184801_61185501_61185619_61185838_61185866_61186445_61186498_61186616
transcript_115593.known	chr2	+	2437	7	FSM	ENSG00000173209.23	ENST00000357022.6	2437	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	124.360586825391	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAAGTGTGCTTTATTTC	61174263	True	NA	8	True	AATAAA	-20	NA	61177417	61187551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_61178385_61178980_61179172_61181319_61181406_61184711_61184801_61185501_61185619_61186445_61186498_61186616
transcript_115598.known	chr2	+	6574	6	FSM	ENSG00000173209.23	ENST00000394457.7	6574	6	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_4	73.3468472396735	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGAATCAGTGGTCTCAA	61174374	True	NA	8	True	AATAAA	-22	NA	61177528	61191203	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_61179172_61181319_61181406_61184711_61184801_61185501_61185619_61186445_61186498_61186616
transcript_115602.nic	chr2	+	2916	6	NIC	ENSG00000173209.23	novel	1509	8	NA	NA	-59	0	intron_retention	FALSE	canonical	3	39	junction_4	126.162752030859	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTAAAGCATTGTTTGAC	61177345	False	NA	109	True	NA	NA	NA	61177358	61186912	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_61179172_61181319_61181406_61184711_61184801_61185501_61186082_61186445_61186498_61186616
transcript_115603.known	chr2	+	2595	6	FSM	ENSG00000173209.23	ENST00000647519.1	2595	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	135.233723604728	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAGCAATCAATCAATCAG	61177916	False	NA	-44	True	AATGAA	-34	NA	61177927	61187499	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_61179172_61181319_61181406_61184711_61184925_61185501_61185619_61186445_61186498_61186616
transcript_115605.known	chr2	+	1971	5	FSM	ENSG00000173209.23	ENST00000471542.5	1971	5	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_2	49.3178466683208	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTAAAGCATTGTTTGAC	61178657	False	NA	109	True	NA	NA	NA	61178667	61186912	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_61179172_61181319_61181406_61184711_61184801_61185501_61186498_61186616
transcript_115609.known	chr2	+	402	2	FSM	ENSG00000173209.23	ENST00000493310.1	402	2	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCTCCTCATCTGTGAAA	61179119	False	NA	NA	False	NA	NA	NA	61179130	61181680	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_61179172_61181319
transcript_115612.known	chr2	-	4660	26	FSM	ENSG00000082898.19	ENST00000676783.1	4660	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	360.541712427286	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGTCTAACTCTACT	-61537299	False	35	38	True	NA	NA	NA	61537774	61477688	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61529065_61529160_61533771_61533904_61537561
transcript_115614.nic	chr2	-	5024	26	ISM	ENSG00000082898.19	ENST00000677928.1	4594	27	-125	245	0	0	intron_retention	FALSE	canonical	2	35	junction_25	351.418838425034	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCCTTTATTGACTCAT	-61515208	True	NA	-10	True	AATAAA	-16	NA	61538356	61477933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61534557_61534679_61537561
transcript_115616.known	chr2	-	4500	26	FSM	ENSG00000082898.19	ENST00000677814.1	4500	26	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_25	289.244992350775	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGTCTAACTCTACT	-61538056	False	NA	38	True	NA	NA	NA	61538531	61477688	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61537561_61537669_61538491
transcript_115623.known	chr2	-	4105	25	FSM	ENSG00000082898.19	ENST00000404992.6	4105	25	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_24	293.055028962139	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCGTTTGTCTAGACTACA	-61536635	False	NA	NA	False	TTTAAA	-45	NA	61537110	61478337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61536709
transcript_115624.known	chr2	-	4549	25	FSM	ENSG00000082898.19	ENST00000677813.1	4549	25	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_24	293.681611424496	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGTCTAACTCTACT	-61536590	False	177	38	True	NA	NA	NA	61537065	61477688	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61536869
transcript_115625.known	chr2	-	4988	25	FSM	ENSG00000082898.19	ENST00000401558.7	4988	25	0	0	0	0	multi-exon	FALSE	canonical	2	723	junction_18	187.653932183391	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACCCCTTGATTTACAAAC	-61515208	True	NA	75	True	AATGAA	-4	NA	61538356	61477848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61537561
transcript_115626.known	chr2	-	4603	25	FSM	ENSG00000082898.19	ENST00000676553.1	4603	25	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_24	291.960539452204	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGTCTAACTCTACT	NA	False	NA	38	True	NA	NA	NA	61538741	61477688	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61538491
transcript_115629.known	chr2	-	4733	25	FSM	ENSG00000082898.19	ENST00000678360.1	4733	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	294.750871735588	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGTCTAACTCTACT	-61537305	False	NA	38	True	NA	NA	NA	61537780	61477688	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488933_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61537561
transcript_11563.known	chr1	-	1937	12	FSM	ENSG00000121940.17	ENST00000674849.1	1937	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	58.5249823043032	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAGCCAATATGTCATTAA	-108961116	True	NA	-57	True	NA	NA	NA	108963425	108932336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_108932502_108934619_108934943_108937076_108937419_108939635_108939783_108940044_108940143_108941404_108941499_108943474_108943616_108943835_108944058_108947610_108947719_108949819_108949922_108950308_108950439_108963360
transcript_115635.known	chr2	-	4437	24	FSM	ENSG00000082898.19	ENST00000678081.1	4437	24	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_8	297.458503722239	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGTCTAACTCTACT	-61537305	False	NA	38	True	NA	NA	NA	61537780	61477688	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61537561
transcript_11564.known	chr1	-	1896	12	FSM	ENSG00000121940.17	ENST00000675956.1	1896	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	49.230945048955	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATTGACTAGCCAATAT	-108961118	True	NA	-65	True	NA	NA	NA	108963427	108932344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_108932502_108934624_108934943_108937076_108937419_108939635_108939783_108940044_108940143_108941404_108941499_108943474_108943616_108943835_108944058_108947610_108947719_108949819_108949922_108950308_108950449_108963400
transcript_11565.nnic	chr1	-	2121	12	NIC	ENSG00000121940.17	novel	6824	13	NA	NA	0	-1	intron_retention	TRUE	canonical	3	17	junction_1	47.9583152331272	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGTCTGCCGATTTTTT	-108961195	True	NA	-8	True	AATAAA	-12	NA	108963504	108929939	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_108930205_108934624_108934943_108937076_108937419_108939635_108939783_108940044_108940143_108941404_108941499_108943474_108943616_108943835_108944058_108947610_108947719_108949819_108949922_108950308_108950449_108963360
transcript_115653.nic	chr2	-	1122	4	ISM	ENSG00000082898.19	ENST00000443240.5	565	7	251	20604	-19	3457	internal_fragment	FALSE	canonical	3	927	junction_2	59.4025813131607	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGGAAAATAAAGAATTATA	-61515227	True	NA	0	True	GATAAA	-40	NA	61538375	61522609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_61522684_61526419_61526522_61533771_61533904_61537561
transcript_115655.known	chr2	-	720	3	FSM	ENSG00000082898.19	ENST00000481214.1	720	3	0	0	0	0	multi-exon	FALSE	canonical	3	927	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGCACCTCTGACACCAA	-61537219	False	NA	NA	False	AATATA	-8	NA	61537694	61526066	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_61526522_61533771_61533904_61537561
transcript_115660.known	chr2	-	3684	6	FSM	ENSG00000170264.13	ENST00000405894.3	3684	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	9.52050418832952	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGAATATGGTTTTTAT	NA	False	NA	-6	True	AATAAA	-17	NA	61854143	61824855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_61826600_61827103_61827259_61836009_61836110_61839420_61840582_61842121_61842361_61853858
transcript_115663.known	chr2	-	1897	5	FSM	ENSG00000170264.13	ENST00000307507.3	1897	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	22.599778759979	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAATTAAAAAAGAGG	-61852557	True	NA	NA	False	AAGAAA	-4	NA	61854064	61836056	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_61836110_61839420_61840582_61842121_61842361_61846758_61846997_61853858
transcript_115668.known	chr2	-	3579	6	FSM	ENSG00000170264.13	ENST00000456262.5	3579	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	16.6685332288117	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAATATGGTTTTTATAT	NA	False	NA	-4	True	AATAAA	-19	NA	61854092	61824853	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_61826600_61827103_61827259_61836009_61836110_61839420_61840526_61842121_61842361_61853858
transcript_115671.known	chr2	-	2376	14	FSM	ENSG00000115484.15	ENST00000394440.8	2376	14	0	0	0	0	multi-exon	FALSE	canonical	3	2676	junction_12	297.415136322295	1485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGTTCCAGTGATTTT	-61858389	True	NA	2	True	NA	NA	NA	61888656	61868084	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_61868707_61869439_61869554_61872081_61872317_61872457_61872589_61873001_61873113_61873196_61873294_61876094_61876235_61876919_61877053_61877392_61877515_61878868_61879012_61880285_61880395_61883458_61883549_61885019_61885073_61888380
transcript_115677.known	chr2	-	2261	13	FSM	ENSG00000115484.15	ENST00000544079.2	2261	13	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_11	911.807770158942	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAGCAAATCTTACTTAAA	NA	False	NA	-9	True	AATAAA	-15	NA	61888671	61868124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_61868707_61869439_61869554_61872081_61872317_61872457_61872589_61873001_61873113_61873196_61873294_61876094_61876235_61876919_61877053_61877392_61877515_61878868_61879012_61880285_61880395_61885019_61885073_61888380
transcript_115696.known	chr2	-	388	2	FSM	ENSG00000115484.15	ENST00000461370.1	388	2	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGACGAATTGGGTGAAC	-61858191	False	NA	-8	True	AATAAA	-19	NA	61888458	61887947	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_61888258_61888380
transcript_115697.known	chr2	+	911	3	FSM	ENSG00000173163.11	ENST00000311832.6	695	3	-27	-189	0	189	multi-exon	FALSE	canonical	3	396	junction_2	17	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTCATGGCTCACTGCA	61900179	True	NA	NA	False	ATTAAA	-41	NA	61905646	62136247	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_61905859_62000700_62000983_62135830
transcript_115699.known	chr2	+	604	2	FSM	ENSG00000173163.11	ENST00000471704.1	604	2	0	0	0	0	multi-exon	FALSE	canonical	3	430	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTAGAATCCTTTTTCAG	61900179	True	NA	NA	False	NA	NA	NA	61905646	62001092	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_61905859_62000700
transcript_115700.known	chr2	+	2761	2	FSM	ENSG00000170340.11	ENST00000301998.5	2761	2	0	0	0	0	multi-exon	FALSE	canonical	3	520	junction_1	0	151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTGTGTAATGTGTAAT	62186203	True	NA	20	True	AATAAA	-17	NA	62196114	62224731	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_62196356_62222211
transcript_115702.known	chr2	-	1654	4	FSM	ENSG00000186889.10	ENST00000335390.6	1654	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0.942809041582063	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCTTGTCTTGTGCAAT	-62506141	False	NA	NA	False	AATAAA	-31	NA	62506195	62500217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_62501488_62502436_62502551_62502690_62502795_62506029
transcript_115708.known	chr2	+	5105	23	FSM	ENSG00000115504.15	ENST00000431489.6	5105	23	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	15.7383697056504	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGCTGCTACTTTCTTGC	62704176	True	NA	13	True	AATAAA	-24	NA	62705712	63046487	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_62706053_62706896_62707296_62747394_62747453_62764265_62764362_62771338_62771393_62826086_62826269_62831018_62831159_62859168_62859292_62864730_62864972_62874345_62874533_62942717_62942897_62943801_62943851_62948259_62949163_62955516_62955661_62979187_62979336_62990715_62990841_62993529_62993669_62993870_62993978_62996642_62996767_63037534_63037635_63038742_63038817_63045065_63045181_63045409
transcript_115710.known	chr2	+	1311	9	FSM	ENSG00000115504.15	ENST00000405482.5	1311	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	12.1423844445809	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTGTGGATATGAGCAAG	62704115	True	NA	NA	False	CATAAA	-39	NA	62705651	62864904	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_62705737_62706896_62707296_62747394_62747453_62764265_62764362_62771338_62771393_62826086_62826269_62831018_62831159_62859168_62859292_62864730
transcript_115714.known	chr2	-	4894	18	FSM	ENSG00000143951.16	ENST00000272321.12	4894	18	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_15	5.20047908360008	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAAAAGTTTTTGCTTC	-63588462	False	NA	-43	True	AATAAA	-19	NA	63588477	63119558	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_63122057_63152913_63152946_63153494_63153575_63174669_63174833_63259306_63259410_63313247_63313312_63378385_63378510_63381905_63382095_63404047_63404658_63433744_63433937_63437420_63437555_63439756_63439872_63484603_63484664_63484916_63484988_63486541_63486587_63487446_63487495_63492855_63492941_63588196
transcript_115728.known	chr2	-	576	8	FSM	ENSG00000143951.16	ENST00000418148.5	576	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	11.7820340574373	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGACTGGAAAAACTCTC	-63588251	False	NA	NA	False	NA	NA	NA	63588266	63437456	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_63437555_63439756_63439856_63484603_63484664_63484916_63484988_63486541_63486587_63487446_63487495_63492855_63492941_63588196
transcript_115729.known	chr2	+	1296	9	FSM	ENSG00000014641.21	ENST00000233114.13	1296	9	0	0	0	0	multi-exon	FALSE	canonical	3	4528	junction_4	239.80744228443	1599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTCAGACTCTGTTTCT	63563916	True	NA	16	True	AATAAA	-18	NA	63588962	63607197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_63589047_63594487_63594587_63595422_63595520_63597398_63597575_63599169_63599293_63604695_63604873_63605279_63605394_63605938_63606029_63606861
transcript_115733.known	chr2	+	1443	9	FSM	ENSG00000014641.21	ENST00000432309.6	1443	9	0	0	0	0	multi-exon	FALSE	canonical	2	44	junction_1	1580.43711813378	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGACTCAGACTCTGTT	63589138	False	NA	13	True	AATAAA	-15	NA	63589150	63607194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_63589385_63594487_63594587_63595422_63595520_63597398_63597575_63599169_63599293_63604695_63604873_63605279_63605394_63605938_63606029_63606861
transcript_115739.known	chr2	+	808	6	FSM	ENSG00000014641.21	ENST00000409476.5	808	6	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_1	1862.16598615698	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAACACATTTTAAAGATT	63563926	True	NA	-90	True	NA	NA	NA	63588972	63607091	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_63589047_63599169_63599293_63604695_63604873_63605279_63605394_63605938_63606029_63606861
transcript_115740.known	chr2	+	893	4	FSM	ENSG00000014641.21	ENST00000485781.5	893	4	0	0	0	0	multi-exon	FALSE	canonical	3	4644	junction_3	189.996491195671	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCCTTTTTTCTAGTTC	63588561	False	NA	NA	False	NA	NA	NA	63588608	63597657	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_63589047_63594487_63594587_63595422_63595520_63597398
transcript_115742.known	chr2	+	406	1	FSM	ENSG00000234488.1	ENST00000411843.1	406	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGATGCTTTGTTTTGGT	NA	False	NA	NA	False	NA	NA	NA	63684304	63684710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_63684300_63684700
transcript_115748.known	chr2	+	2057	11	FSM	ENSG00000169764.16	ENST00000467648.6	2057	11	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	1328.40882637839	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATTGTTTAATCTTAAAA	63829012	True	NA	-95	True	NA	NA	NA	63840968	63891451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_63841233_63842538_63842600_63856305_63856434_63857828_63857937_63882465_63882652_63883959_63884094_63885588_63885887_63886340_63886539_63887401_63887645_63890080_63890186_63891119
transcript_11575.known	chr1	-	4240	15	FSM	ENSG00000085433.17	ENST00000369965.8	4240	15	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_10	8.13658906622751	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTCTGTTCCTCAGTCT	-109041182	True	NA	-3	True	AATAAA	-20	NA	109042113	108970213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_108971573_108974535_108974755_108981732_108981865_108982608_108982780_108983281_108983452_108986522_108986681_108991253_108991330_108995579_108995838_109002223_109002403_109004591_109004719_109010915_109011719_109013840_109013926_109017517_109017602_109023354_109023522_109041861
transcript_115754.nic	chr2	+	2844	11	NIC	ENSG00000169764.16	novel	2150	10	NA	NA	37	0	intron_retention	FALSE	canonical	3	44	junction_1	1330.2262363974	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTGTACACTGGTACT	63839708	False	NA	14	True	AATAAA	-13	NA	63841262	63891560	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_63842205_63842538_63842600_63856305_63856434_63857828_63857937_63882465_63882652_63883959_63884094_63885588_63885887_63886340_63886539_63887401_63887645_63890080_63890186_63891119
transcript_115764.known	chr2	+	2105	10	FSM	ENSG00000169764.16	ENST00000394417.7	2105	10	0	0	0	0	multi-exon	FALSE	canonical	3	1234	junction_1	746.636077415742	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTGTACACTGGTACT	63829012	True	NA	14	True	AATAAA	-13	NA	63840968	63891560	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_63841233_63856305_63856434_63857828_63857937_63882465_63882652_63883959_63884094_63885588_63885887_63886340_63886539_63887401_63887645_63890080_63890186_63891119
transcript_115766.known	chr2	+	1699	10	FSM	ENSG00000169764.16	ENST00000678298.1	1699	10	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_5	1229.65151140727	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCAATACTTTCCTTCTT	63829070	True	NA	62	True	AATAGA	-41	NA	63841026	63891394	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_63841233_63856305_63856434_63857828_63857937_63882465_63882652_63883959_63884094_63885770_63885887_63886340_63886539_63887401_63887645_63890080_63890186_63891119
transcript_11577.known	chr1	-	4115	14	FSM	ENSG00000085433.17	ENST00000361054.7	4115	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	8.84180495107755	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTCTGTTCCTCAGTCT	-109041144	True	NA	-3	True	AATAAA	-20	NA	109042075	108970213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_108971573_108974535_108974755_108981732_108981865_108982608_108982780_108983281_108983452_108986522_108986681_108991253_108991330_108995579_108995838_109002223_109002403_109004591_109004716_109010915_109011719_109013840_109013926_109023354_109023522_109041861
transcript_115770.known	chr2	+	2150	10	FSM	ENSG00000169764.16	ENST00000337130.10	2150	10	0	0	0	0	multi-exon	FALSE	canonical	3	1787	junction_1	594.395512004724	1697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTGTACACTGGTACT	63798289	True	NA	14	True	AATAAA	-13	NA	63841895	63891560	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_63842205_63856305_63856434_63857828_63857937_63882465_63882652_63883959_63884094_63885588_63885887_63886340_63886539_63887401_63887645_63890080_63890186_63891119
transcript_115786.nic	chr2	+	842	5	ISM	ENSG00000169764.16	ENST00000337130.10	2150	10	-38	7528	1	0	5prime_fragment	FALSE	canonical	3	1787	junction_1	544.266191766492	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATACTACAGAAGTAC	63798251	True	NA	NA	False	AATGAA	-27	NA	63841857	63884032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_63842205_63856305_63856434_63857828_63857937_63882465_63882652_63883959
transcript_11579.known	chr1	+	555	1	FSM	ENSG00000244716.3	ENST00000414070.1	555	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCAGCATTAAAATAAATG	NA	False	NA	NA	False	AAGAAA	-34	NA	108992281	108992836	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_108992300_108992800
transcript_115794.known	chr2	-	4337	23	FSM	ENSG00000143952.20	ENST00000409558.8	4337	23	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_21	19.3421242006932	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAAAAGGCAACTTTTTT	-64017041	False	NA	-11	True	AATAAA	-20	NA	64019072	63892145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_63893536_63897495_63897591_63899473_63899582_63912344_63912426_63912539_63912662_63913222_63913311_63914181_63914288_63916899_63916964_63919882_63919996_63920445_63920628_63921205_63921336_63933672_63934014_63942464_63942562_63944599_63944656_63947382_63947491_63949036_63949164_63962057_63962444_63965834_63965967_63968956_63968992_63972165_63972245_63981645_63981852_63983863_63984020_64018937
transcript_115795.known	chr2	-	4725	23	FSM	ENSG00000143952.20	ENST00000272322.9	4725	23	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_21	17.6799484872665	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACTTTAAAAGGCAACTT	-64017397	True	NA	-15	True	AATAAA	-16	NA	64019428	63892149	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_63893536_63897495_63897591_63899473_63899582_63912344_63912426_63912539_63912662_63913222_63913311_63914181_63914288_63916899_63916964_63919882_63919996_63920445_63920628_63921205_63921336_63933672_63934014_63942464_63942562_63944599_63944656_63947382_63947491_63949036_63949164_63962057_63962444_63965834_63965967_63968956_63968992_63972165_63972245_63981645_63981888_63983863_63984020_64018937
transcript_11580.known	chr1	-	4144	14	NNC	ENSG00000085433.17	novel	4226	15	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	10.8600565561311	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGTTTCTGTTCCTCA	-109041171	True	NA	-7	True	AATAAA	-16	NA	109042102	108970217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_108971573_108974535_108974755_108981732_108981865_108982608_108982786_108983281_108983452_108986522_108986681_108991253_108991330_108995579_108995838_109002223_109002403_109004591_109004716_109010915_109011719_109013840_109013926_109023354_109023522_109041861
transcript_115802.known	chr2	+	821	5	FSM	ENSG00000225889.10	ENST00000413030.8	1071	5	0	250	0	7	multi-exon	FALSE	canonical	0	0	junction_3	11.1130553854464	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTTCCTGGCTCATCC	64227927	True	NA	NA	False	NA	NA	NA	64228400	64252609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_64228523_64229496_64229641_64251118_64251338_64251688_64251835_64252419
transcript_115805.known	chr2	+	2842	2	FSM	ENSG00000225889.10	ENST00000661002.1	2842	2	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCGAGATTGTGCCACTGC	64227951	True	NA	NA	False	NA	NA	NA	64228424	64232240	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_64228523_64229496
transcript_115807.nnic	chr2	-	907	2	Antisense	novelGene_ENSG00000225889.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGGAAGGAAGGAAAGAAAA	-64255014	True	NA	NA	False	AAAAAG	-22	NA	64255417	64209761	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr2_-_64210167_64254915
transcript_115810.known	chr2	+	1555	4	FSM	ENSG00000225889.10	ENST00000451350.3	1582	4	27	0	1	0	multi-exon	FALSE	canonical	2	22	junction_3	2.44948974278318	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	64227943	True	NA	15	True	ATTAAA	-21	NA	64228416	64252859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_64228523_64229496_64229641_64251118_64251984_64252419
transcript_115811.nic	chr2	-	3571	8	NIC	ENSG00000197329.12	novel	3716	7	NA	NA	-22	-211	combination_of_known_junctions	FALSE	canonical	3	13	junction_5	110.344173995249	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATAATTGAATTCGTCTC	-64137707	True	NA	-18	True	AGTAAA	-13	NA	64144442	64092862	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_64095269_64096124_64096314_64096412_64096611_64100397_64100500_64104553_64104598_64104700_64104831_64108239_64108380_64144080
transcript_115815.known	chr2	-	3716	7	FSM	ENSG00000197329.12	ENST00000358912.5	3716	7	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_6	22.2785397486759	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGGCCTTTTCTAAGTTA	-64137685	True	NA	NA	False	AATAAA	-25	NA	64144420	64092651	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_64095269_64096124_64096314_64096412_64096611_64100397_64100500_64104700_64104831_64108239_64108380_64144080
transcript_115825.known	chr2	+	548	5	FSM	ENSG00000119862.13	ENST00000420552.5	548	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	54.2373257084086	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAAGCTTGGCTGATTTA	64452606	True	NA	NA	False	CATAAA	-22	NA	64454520	64458412	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_64454582_64455343_64455416_64455588_64455678_64456267_64456466_64458284
transcript_115827.known	chr2	+	3856	5	FSM	ENSG00000119862.13	ENST00000238875.10	3856	5	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	8.8423695919137	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTTCCAGTTTATAACAT	64453589	True	NA	12	True	AATAAA	-17	NA	64454161	64461381	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_64454582_64455343_64455416_64455588_64455678_64456287_64456466_64458284
transcript_11583.known	chr1	+	2769	3	FSM	ENSG00000215717.7	ENST00000338272.9	2769	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	16	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGTCAATTTATTTGT	109089510	True	NA	16	True	AATAAA	-17	NA	109090763	109096934	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109090883_109092889_109093022_109094416
transcript_115833.known	chr2	+	4113	10	FSM	ENSG00000119844.16	ENST00000238855.11	4113	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	40.8124285112716	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAATTTAGCCTGGTG	NA	False	NA	NA	False	AATAAA	-8	NA	64524304	64592997	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_64524613_64551442_64553410_64567561_64567714_64569091_64569219_64569622_64569680_64572945_64573069_64579485_64579547_64581189_64581274_64585421_64585546_64591887
transcript_115834.known	chr2	+	4040	9	FSM	ENSG00000119844.16	ENST00000238856.8	4040	9	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_8	12.5243512806053	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGCCTGGTGTCTTTGTA	NA	False	NA	NA	False	AATAAA	-16	NA	64524304	64593005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_64524613_64551442_64553410_64567561_64567714_64569091_64569219_64569622_64569680_64572945_64573069_64579485_64579547_64585421_64585546_64591884
transcript_115846.known	chr2	-	318	1	FSM	ENSG00000179833.4	ENST00000608423.1	318	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTGGTCTATTATTTCC	-64750884	False	NA	NA	False	ATTAAA	-36	NA	64750895	64750577	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_64750600_64750900
transcript_11585.known	chr1	+	2808	3	FSM	ENSG00000215717.7	ENST00000651489.1	2808	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	64	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTCCCTACAGTCTTTG	109089519	True	NA	3	True	AATAAA	-4	NA	109090772	109096921	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109090883_109092889_109093083_109094416
transcript_115850.nnic	chr2	-	692	3	FSM	ENSG00000237638.3	ENST00000685506.1	663	3	-31	2	0	-2	multi-exon	FALSE	canonical	3	12	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGTTTTAGAGTAATTT	-65055341	False	NA	-3	True	GATAAA	-17	NA	65056226	65047891	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_65048213_65051278_65051338_65055914
transcript_115851.known	chr2	-	608	2	FSM	ENSG00000237638.3	ENST00000666526.2	671	2	63	0	5	0	multi-exon	FALSE	canonical	3	27	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAATTCACTAGGTAAAGG	-65055278	True	NA	35	True	AATAGA	-3	NA	65056163	65047853	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_65048213_65055914
transcript_115854.known	chr2	+	4563	8	FSM	ENSG00000115902.11	ENST00000234256.4	4563	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.79580864445326	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAGTTCCTTTATTCCC	64989319	True	NA	22	True	AATGAA	-20	NA	64989398	65023865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_64990171_65001447_65001491_65003952_65004016_65010596_65010764_65016439_65016674_65018070_65018266_65018544_65018680_65020911
transcript_115858.known	chr2	+	5803	7	FSM	ENSG00000011523.14	ENST00000377990.7	5803	7	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_4	18.3734409769464	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATTTTTGGCTTGTGTTT	65053787	True	NA	7	True	AATAAA	-16	NA	65056415	65087004	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_65056529_65069398_65069802_65071453_65072981_65074281_65074405_65077867_65077965_65082535_65082710_65083638
transcript_11586.known	chr1	+	427	1	FSM	ENSG00000270066.3	ENST00000602755.1	427	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCGGGCTGCGGGCTGCCG	108962784	True	NA	NA	False	NA	NA	NA	109100192	109100619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109100200_109100600
transcript_115864.known	chr2	-	2448	6	FSM	ENSG00000138069.18	ENST00000409784.8	2448	6	0	0	0	0	multi-exon	FALSE	canonical	3	1323	junction_5	104.763352370951	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATAGGCGTGCTTGGTGGA	-65116451	True	NA	NA	False	AATAAA	-20	NA	65130106	65086853	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_65088691_65088938_65089071_65090982_65091079_65097970_65098067_65104733_65104807_65129892
transcript_115869.known	chr2	-	1333	5	FSM	ENSG00000138069.18	ENST00000409751.1	1333	5	0	0	0	0	multi-exon	FALSE	canonical	1	16	junction_3	620.845139708768	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATGGTGATAAGTATTG	-65116449	True	NA	-12	True	AATAAA	-29	NA	65130104	65087870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_65088691_65088938_65089071_65090982_65091079_65104733_65104807_65129892
transcript_11587.known	chr1	+	1882	12	FSM	ENSG00000031698.13	ENST00000369923.4	1882	12	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_9	385.620011654517	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGCTTGAACCCCGCCTCT	109199243	True	NA	-20	True	AATAAA	-45	NA	109213981	109238148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109214129_109223977_109224049_109228351_109228433_109229413_109229573_109230877_109231022_109231630_109231787_109235209_109235432_109235976_109236107_109236390_109236549_109236804_109236871_109237243_109237374_109237730
transcript_115872.nic	chr2	+	2319	4	ISM	ENSG00000011523.14	ENST00000377990.7	5803	7	-67	12514	-17	6	5prime_fragment	FALSE	canonical	3	80	junction_1	12.2836838484589	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGTATGTTATAGCTC	65053720	True	NA	15	True	AGTAAA	-16	NA	65056348	65074490	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_65056529_65069398_65069802_65071453_65072981_65074281
transcript_115874.known	chr2	-	2254	4	FSM	ENSG00000138069.18	ENST00000409892.5	2254	4	0	0	0	0	multi-exon	FALSE	canonical	2	32	junction_2	628.802565728438	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATAGGCGTGCTTGGTGG	-65116450	True	NA	NA	False	AATAAA	-19	NA	65130105	65086854	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_65088691_65088938_65089071_65104733_65104807_65129892
transcript_115875.known	chr2	-	1198	4	FSM	ENSG00000138069.18	ENST00000398529.7	1198	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	633.230342503158	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATGGTGATAAGTATTG	-65116446	True	NA	-12	True	AATAAA	-29	NA	65130101	65087870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_65088691_65097970_65098067_65104733_65104807_65129892
transcript_115880.known	chr2	+	3783	9	FSM	ENSG00000138071.15	ENST00000260641.10	3783	9	0	0	0	0	multi-exon	FALSE	canonical	3	680	junction_6	50.6155855443756	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAATTTTGTCATTTCTT	65208944	True	NA	22	True	AATAAA	-22	NA	65227830	65271253	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_65227958_65239851_65239963_65246523_65246740_65251026_65251100_65253727_65253865_65255544_65255695_65261246_65261393_65265042_65265176_65268563
transcript_115888.known	chr2	+	2685	10	FSM	ENSG00000138071.15	ENST00000377982.8	2685	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	309.8639287187	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACTAATTACAAAATACAAG	65208950	True	NA	NA	False	AATAAA	-15	NA	65227836	65270146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_65227958_65239851_65239963_65242048_65242064_65246523_65246740_65251026_65251100_65253727_65253865_65255544_65255695_65261246_65261393_65265042_65265176_65268563
transcript_115893.known	chr2	-	4519	6	FSM	ENSG00000198369.10	ENST00000356388.9	4519	6	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	14.3331782937351	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTGGCTTTGGGGTATTT	-65432442	False	NA	-1	True	TATAAA	-15	NA	65432599	65310850	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_65314170_65316733_65316884_65331986_65332052_65334604_65334774_65344718_65344897_65431961
transcript_115900.known	chr2	+	4948	6	FSM	ENSG00000143971.9	ENST00000272342.6	4948	6	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	25.5076459125494	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGTATAAATCTTATTTT	67394895	True	NA	NA	False	NA	NA	NA	67397332	67412089	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_67397672_67399168_67399298_67399549_67399627_67402861_67402975_67403224_67405336_67409910
transcript_115907.known	chr2	-	772	6	FSM	ENSG00000197223.12	ENST00000409302.1	772	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	241.439019216033	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATAATTTACCATCTCT	-68055060	True	NA	NA	False	NA	NA	NA	68063009	68042676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_68043054_68045987_68046044_68046343_68046411_68047172_68047316_68053060_68053138_68062957
transcript_115908.known	chr2	-	2233	5	FSM	ENSG00000197223.12	ENST00000355848.7	2233	5	0	0	0	0	multi-exon	TRUE	canonical	3	143	junction_4	154.837616553601	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCATTGGGTTGCTTATTT	-68055034	True	NA	NA	False	TTTAAA	-35	NA	68062983	68041129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_68043054_68045987_68046044_68046343_68046411_68047172_68047320_68062944
transcript_115909.known	chr2	-	2241	5	FSM	ENSG00000197223.12	ENST00000410067.8	2241	5	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_4	107.749709976408	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCATTGGGTTGCTTATTT	-68055055	True	NA	NA	False	TTTAAA	-35	NA	68063004	68041129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_68043054_68045987_68046044_68046343_68046411_68047172_68047320_68062957
transcript_115914.known	chr2	-	2591	8	FSM	ENSG00000243667.7	ENST00000295121.11	2591	8	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	13.3889994444114	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGCTTTATAAATGCTTA	-68154914	True	NA	-32	True	AATAAA	-19	NA	68157527	68129804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_68131446_68134701_68134800_68137298_68137434_68138741_68138858_68141693_68141796_68144584_68144716_68147466_68147568_68157260
transcript_115916.known	chr2	-	1517	7	FSM	ENSG00000243667.7	ENST00000409164.1	1517	7	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	8.73212459828649	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGAGTTAATGGTATTTC	-68154869	True	NA	NA	False	ATTAAA	-14	NA	68157482	68134089	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_68134800_68137298_68137434_68138741_68138858_68141693_68141796_68144584_68144716_68147466_68147568_68157260
transcript_115918.known	chr2	+	2242	7	FSM	ENSG00000115946.8	ENST00000263657.7	2242	7	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_2	48.5549516870662	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTATGCATCTCTAAAACC	68150202	True	NA	7	True	ATTAAA	-18	NA	68157887	68176238	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_68158142_68158379_68158530_68161682_68161767_68162264_68162326_68162545_68162664_68173346_68173418_68174734
transcript_115927.known	chr2	-	3024	6	FSM	ENSG00000221823.11	ENST00000234310.8	3024	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	5.60713830755047	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAATGTATTCAGTGGTC	-68239533	True	NA	-13	True	AATAAA	-15	NA	68252532	68178856	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_68181011_68186467_68186653_68187254_68187315_68188513_68188691_68217091_68217132_68252124
transcript_115929.known	chr2	+	979	1	FSM	ENSG00000273064.1	ENST00000608069.1	979	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAATGGTTCCTGTCTCTC	68252743	True	NA	NA	False	AATAAA	-23	NA	68252869	68253848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_68252900_68253800
transcript_11593.known	chr1	+	1914	11	FSM	ENSG00000031698.13	ENST00000234677.7	1914	11	0	0	0	0	multi-exon	FALSE	canonical	3	946	junction_5	82.1914837437553	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACACTTCTGCTTTTCCT	109199179	True	NA	14	True	NA	NA	NA	109213917	109238182	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109214129_109223977_109224049_109228351_109228433_109229413_109229573_109230877_109231022_109231630_109231787_109235209_109235432_109235976_109236107_109236390_109236549_109237243_109237374_109237730
transcript_115930.known	chr2	-	1896	3	FSM	ENSG00000119865.9	ENST00000263655.4	1896	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCTGACTTGCATTCTTA	NA	False	NA	-1	True	AATAAA	-15	NA	68319949	68293009	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_68294027_68317156_68317308_68319221
transcript_115932.known	chr2	+	3823	10	FSM	ENSG00000169621.10	ENST00000303795.9	3823	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	6.42910050732864	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAAGTGTAATGAAAATGA	68466624	True	NA	NA	False	AATAAA	-17	NA	68467584	68580162	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_68467828_68490189_68490262_68502730_68502904_68513079_68513228_68513547_68513681_68526060_68526243_68537871_68538228_68545186_68545313_68567340_68567388_68577819
transcript_115936.known	chr2	+	4287	3	FSM	ENSG00000169618.7	ENST00000303786.5	4287	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	2.5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGAGCGTCATGTCCTG	68643543	True	NA	20	True	AATGAA	-22	NA	68643578	68658251	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_68643849_68645661_68646307_68654879
transcript_115937.nic	chr2	+	2908	12	NIC	ENSG00000163219.12	novel	2939	10	NA	NA	-66	0	combination_of_known_junctions	TRUE	canonical	1	2	junction_7	2.1242402628269	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTATTGCTAATCCATACG	NA	False	NA	NA	False	AATAAA	-20	NA	68679534	68826833	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_68679730_68710504_68710699_68775220_68775421_68782232_68782321_68787839_68787957_68807272_68807481_68813286_68813420_68816288_68816363_68817872_68817995_68819122_68819320_68822339_68822873_68825986
transcript_115940.known	chr2	+	5858	18	FSM	ENSG00000169604.21	ENST00000303714.9	5858	18	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_15	31.9622398321286	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTTTTCTGGTTATTTG	69013132	True	NA	14	True	AATAAA	-14	NA	69013178	69249327	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_69013652_69040043_69040116_69044741_69044814_69070646_69070729_69071753_69071788_69073021_69073102_69075589_69075659_69077407_69077489_69090858_69090920_69102841_69102941_69123016_69123087_69124564_69124644_69152168_69152265_69170247_69170290_69181785_69181882_69182492_69182661_69193334_69193416_69245224
transcript_115943.known	chr2	+	2221	13	FSM	ENSG00000169604.21	ENST00000409829.7	2221	13	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_12	23.1264639176276	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGGTTGATACTTAGGC	69006962	True	NA	1	True	AATAAA	-12	NA	69013305	69146401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_69013652_69040043_69040116_69044741_69044814_69070646_69070729_69071753_69071788_69073021_69073102_69075589_69075659_69077407_69077489_69090858_69090920_69102841_69102941_69123016_69123087_69124564_69124644_69145325
transcript_115949.known	chr2	+	1449	10	FSM	ENSG00000169604.21	ENST00000463335.2	1449	10	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_8	8.09663853432741	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTAGATTCTGCAGCTTT	69007013	True	NA	18	True	AATAAA	-27	NA	69013356	69103444	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_69013652_69040043_69040116_69044741_69044814_69070646_69070729_69071753_69071788_69073021_69073102_69075589_69075659_69077407_69077489_69090858_69090920_69102841
transcript_115957.known	chr2	-	8632	19	FSM	ENSG00000198380.13	ENST00000361060.5	8632	19	0	0	0	0	multi-exon	FALSE	canonical	3	476	junction_4	54.9452308673076	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTATTATTAATTTACTT	-69371534	True	NA	-16	True	AATAAA	-13	NA	69387248	69319779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_69326234_69326913_69327076_69328270_69328439_69329296_69329425_69329683_69329799_69337897_69338056_69338444_69338566_69342151_69342250_69345903_69346000_69348170_69348335_69350077_69350184_69354488_69354569_69356495_69356558_69358328_69358464_69359267_69359327_69363544_69363671_69370000_69370109_69374005_69374114_69387064
transcript_115965.nic	chr2	-	2112	18	ISM	ENSG00000198380.13	ENST00000361060.5	8632	19	-38	7238	-36	-1595	5prime_fragment	FALSE	canonical	3	476	junction_3	47.911611237251	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACGATCAAGGTGCCCCAC	-69371572	True	NA	NA	False	NA	NA	NA	69387286	69327017	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_69327076_69328270_69328439_69329296_69329425_69329683_69329799_69337897_69338056_69338444_69338566_69342151_69342250_69345903_69346000_69348170_69348335_69350077_69350184_69354488_69354569_69356495_69356558_69358328_69358464_69359267_69359327_69363544_69363671_69370000_69370109_69374005_69374114_69387064
transcript_115976.known	chr2	-	1034	8	FSM	ENSG00000169599.13	ENST00000303698.7	1034	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	137.932399887682	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCATGTTTGCTTTACC	-69433827	True	NA	-23	True	AATAAA	-29	NA	69437475	69396119	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_69396291_69400363_69400539_69406021_69406083_69415184_69415300_69419537_69419605_69423581_69423718_69431901_69432006_69437270
transcript_115977.known	chr2	-	898	8	FSM	ENSG00000169599.13	ENST00000410022.7	898	8	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_5	20.457023144103	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATATTGCATGTTTGC	-69433787	True	NA	-29	True	AATAAA	-23	NA	69437435	69396125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_69396291_69400363_69400539_69406021_69406083_69415184_69415300_69419537_69419605_69423581_69423718_69431901_69432006_69437360
transcript_115979.known	chr2	-	1058	7	FSM	ENSG00000169599.13	ENST00000394305.5	1058	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	187.333629893004	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGCTTTACCTCATATG	-69437614	False	NA	-16	True	AATAAA	-36	NA	69437628	69396112	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_69396291_69400363_69400539_69406021_69406083_69415184_69415300_69419537_69419605_69431901_69432006_69437270
transcript_115980.nic	chr2	-	762	7	NIC	ENSG00000169599.13	novel	898	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_5	145.213253144776	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATATTGCATGTTTGC	-69433787	True	NA	-29	True	AATAAA	-23	NA	69437435	69396125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_69396291_69400363_69400539_69406021_69406083_69415184_69415300_69419537_69419605_69431901_69432006_69437360
transcript_115983.known	chr2	-	598	6	FSM	ENSG00000169599.13	ENST00000471185.5	598	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	180.835394765516	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTGCTTTACCTCATA	-69433787	True	NA	-18	True	AATAAA	-34	NA	69437435	69396114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_69396291_69406021_69406083_69415184_69415300_69419537_69419605_69431901_69432006_69437360
transcript_115984.known	chr2	-	453	2	FSM	ENSG00000115977.21	ENST00000492192.1	453	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATCTAGAAACCATC	-69643802	False	NA	NA	False	AAGAAA	-37	NA	69643845	69643092	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_69643275_69643574
transcript_115985.known	chr2	+	1414	13	FSM	ENSG00000196975.16	ENST00000409920.5	1414	13	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	22.1001508290479	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTACTTTCTACTTTGTGT	69741916	True	NA	26	True	AATAAA	-23	NA	69741973	69825781	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_69742176_69781519_69781575_69788053_69788142_69804532_69804628_69806384_69806433_69807905_69807997_69810593_69810674_69812652_69812710_69816100_69816195_69818598_69818695_69819279_69819339_69820698_69820822_69825455
transcript_115988.known	chr2	+	2651	13	FSM	ENSG00000196975.16	ENST00000394295.6	2651	13	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_5	10.9807280673409	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGGGAATACTTGCCTTT	69741877	True	NA	NA	False	ATTAAA	-35	NA	69742133	69827112	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_69742176_69781519_69781575_69788053_69788142_69804532_69804628_69806384_69806499_69807905_69807997_69810593_69810674_69812652_69812710_69816100_69816195_69818598_69818695_69819279_69819339_69820698_69820822_69825455
transcript_115998.known	chr2	+	4161	14	FSM	ENSG00000087338.5	ENST00000282570.4	4161	14	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_8	30.588701166497	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGTGAAAGCTTTGTG	69823095	True	NA	29	True	AATAAA	-37	NA	69829659	69881384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_69830153_69837546_69837671_69839456_69839554_69840941_69841040_69843148_69843262_69844130_69844197_69847542_69847628_69849651_69849743_69854822_69854961_69861277_69861348_69864899_69864976_69869718_69869865_69871744_69871833_69878908
transcript_116.known	SIRV3	-	479	3	FSM	SIRV3B	SIRV308	479	3	0	0	0	0	multi-exon	FALSE	canonical	3	6161	junction_2	18	494	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTATTTGTATGGCGGA	NA	False	NA	NA	False	NA	NA	NA	1982	1000	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV3_-_1168_1532_1765_1902
transcript_116013.known	chr2	+	766	7	FSM	ENSG00000124380.11	ENST00000450162.6	766	7	0	0	0	0	multi-exon	TRUE	canonical	3	53	junction_6	151.316445460058	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTGATAAATATTTTTAT	69880540	True	NA	6	True	AATAAA	-21	NA	69893963	69904671	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_69894019_69895093_69895215_69896435_69896549_69897376_69897457_69903180_69903246_69904253_69904426_69904511
transcript_116014.known	chr2	+	1425	6	FSM	ENSG00000124380.11	ENST00000244227.8	1425	6	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_1	31.9724881734281	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTGTATGTTTCATTA	69880532	True	NA	24	True	ATTAAA	-33	NA	69893955	69905236	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_69894019_69895093_69895215_69896435_69896549_69897376_69897457_69903180_69903246_69904253
transcript_116018.known	chr2	+	5549	6	FSM	ENSG00000059728.11	ENST00000264444.7	5549	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	1.67332005306815	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTCTTTCTGATGTTT	69914568	True	NA	NA	False	AATAAA	-21	NA	69915108	69942945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_69915404_69916120_69916221_69921735_69921766_69935350_69935466_69937234_69937395_69938096
transcript_116019.known	chr2	+	1339	5	FSM	ENSG00000124380.11	ENST00000409116.5	1339	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	188.077610310212	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTCTCCATTACATACATA	69880535	True	NA	6	True	ATTAAA	-15	NA	69893958	69905218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_69894019_69895093_69895215_69896435_69896549_69897376_69897457_69904253
transcript_116021.nic	chr2	+	330	4	ISM	ENSG00000124380.11	ENST00000450162.6	766	7	-20	7274	-12	-6010	5prime_fragment	FALSE	canonical	3	402	junction_1	24.0878023535196	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGAGGAAGAAATAGAAATG	69880520	True	NA	NA	False	NA	NA	NA	69893943	69897397	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_69894019_69895093_69895215_69896435_69896549_69897376
transcript_116022.nic	chr2	+	286	3	ISM	ENSG00000124380.11	ENST00000450162.6	766	7	-20	8146	-12	-6882	5prime_fragment	FALSE	canonical	3	402	junction_1	29.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGCAAAGAACGGCAGATTA	69880520	True	NA	NA	False	AAGAAA	-38	NA	69893943	69896525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_69894019_69895093_69895215_69896435
transcript_116024.known	chr2	-	2817	8	FSM	ENSG00000179818.16	ENST00000664754.1	2817	8	0	0	0	0	multi-exon	TRUE	canonical	2	11	junction_1	8.63074712399612	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTACTTGAGGGAGGGGG	-70086010	True	NA	NA	False	NA	NA	NA	70086946	70049210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70050269_70051202_70051306_70053730_70053793_70055713_70055911_70059642_70059681_70083537_70083688_70085546_70085625_70085815
transcript_116030.known	chr2	-	741	6	FSM	ENSG00000179818.16	ENST00000626842.2	741	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	14.0996453856117	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACACCTTCTCGGTGACTC	-70086069	True	NA	NA	False	NA	NA	NA	70087005	69963288	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_69963501_69996685_69996889_70018014_70018132_70051202_70051306_70085546_70085625_70086977
transcript_116034.known	chr2	-	3975	6	FSM	ENSG00000179818.16	ENST00000419542.5	4041	6	66	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	14.3471251475688	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTCATGGAAAAACCATG	-70086199	False	NA	-10	True	AATAAA	-4	NA	70086220	69960103	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_69963501_69988741_69988839_69996685_69996889_70051202_70051306_70085546_70085625_70086123
transcript_116040.known	chr2	-	547	5	FSM	ENSG00000179818.16	ENST00000418564.5	547	5	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	13.57156954814	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAGGTAATGAATACCAGG	-70086252	False	936	NA	False	NA	NA	NA	70086273	69963487	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_69963501_69996685_69996889_70051202_70051306_70085546_70085625_70086123
transcript_116042.known	chr2	-	3740	5	FSM	ENSG00000179818.16	ENST00000653606.1	3740	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	8.45576726264388	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAGAAAAGACTGGAGT	-70086057	True	NA	NA	False	NA	NA	NA	70086993	70030014	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70031932_70032132_70032256_70051202_70051306_70083537_70083688_70085546
transcript_116043.known	chr2	-	3305	5	FSM	ENSG00000179818.16	ENST00000659941.1	3305	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	9.48683298050514	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAGAAAAGACTGGAGT	-70086878	False	NA	NA	False	NA	NA	NA	70086899	70030014	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70031932_70032132_70032256_70051202_70051306_70085546_70085625_70085815
transcript_116044.known	chr2	-	2393	5	FSM	ENSG00000179818.16	ENST00000425601.6	2393	5	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_2	8.6421930087218	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGGAGTTTGCATCTAT	-70086264	False	NA	NA	False	ATTAAA	-9	NA	70086285	70030004	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70031932_70032132_70032256_70051202_70051306_70085546_70085625_70086123
transcript_116046.known	chr2	-	2257	5	FSM	ENSG00000179818.16	ENST00000657575.2	2304	5	29	18	0	0	multi-exon	FALSE	canonical	3	18	junction_2	9.09670269933013	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAGAAAAGACTGGAGT	-70086077	True	NA	NA	False	NA	NA	NA	70087013	70030014	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70031932_70032132_70032256_70051202_70051306_70085546_70085625_70086977
transcript_116047.known	chr2	-	546	5	FSM	ENSG00000179818.16	ENST00000425333.5	546	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	10.7092249953019	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAACCCTGAACATTTCAT	-70087198	True	NA	NA	False	NA	NA	NA	70087343	70031752	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70031932_70032132_70032256_70051202_70051306_70085546_70085625_70087280
transcript_116053.known	chr2	-	1852	4	FSM	ENSG00000179818.16	ENST00000437019.2	1852	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	10.6144555520604	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGAGGGAGCATGGCCC	-70086029	True	NA	-94	True	NA	NA	NA	70086965	70048777	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70048958_70051202_70051306_70083537_70083688_70085546
transcript_116054.known	chr2	-	1527	4	FSM	ENSG00000179818.16	ENST00000669812.1	1527	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	12.0277457017791	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCCTAAAACTTAAAGTATA	-70086252	False	936	NA	False	NA	NA	NA	70086273	70049072	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70050269_70051202_70051306_70085546_70085625_70086123
transcript_116055.known	chr2	-	1388	4	FSM	ENSG00000179818.16	ENST00000660404.2	1397	4	9	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	9.7410927974683	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACATGTACCCTAAAACTT	-70086076	True	NA	NA	False	NA	NA	NA	70087012	70049080	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70050253_70051202_70051306_70085546_70085625_70086977
transcript_116059.known	chr2	-	478	4	FSM	ENSG00000179818.16	ENST00000444410.5	478	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	9.28559218478941	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGGCTGATTTTTGTATTT	-70085637	False	NA	NA	False	NA	NA	NA	70085658	70050139	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70050253_70051202_70051306_70083537_70083688_70085546
transcript_116062.known	chr2	+	1727	1	FSM	ENSG00000169564.7	ENST00000303577.7	1727	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	895	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGTTGGTGCCTTTTT	70070363	True	NA	60	True	AAAAAG	-21	NA	70087476	70089203	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_70087500_70089200
transcript_116063.known	chr2	-	662	2	FSM	ENSG00000231327.2	ENST00000414141.2	679	2	15	2	15	0	multi-exon	FALSE	canonical	3	36	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTGTCATACTTCTTT	-70124791	True	NA	-4	True	AAAAAG	-18	NA	70125317	70124035	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70124426_70125045
transcript_116088.known	chr2	-	3823	13	FSM	ENSG00000116001.17	ENST00000282574.8	3823	13	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	122.470971617314	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGGATCTTCTTGCAG	-70238442	True	NA	-22	True	ATTAAA	-22	NA	70248580	70210203	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70212846_70214348_70214492_70215370_70215495_70216207_70216293_70216403_70216500_70216885_70216995_70224553_70224630_70227734_70227823_70229058_70229092_70229263_70229319_70230755_70230855_70236078_70236176_70248404
transcript_11609.known	chr1	+	804	2	FSM	ENSG00000031698.13	ENST00000482384.1	804	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGCTGATTCTATGT	109199193	True	NA	NA	False	NA	NA	NA	109213931	109215153	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109214129_109214546
transcript_116122.known	chr2	-	4633	12	FSM	ENSG00000116001.17	ENST00000415783.6	4633	12	0	0	0	0	multi-exon	TRUE	canonical	3	58	junction_8	128.373100346459	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTTTTCTACCTTCATT	-70248638	False	NA	1	True	AATAAA	-25	NA	70248660	70209443	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70212846_70214348_70214495_70215370_70215495_70216207_70216293_70216403_70216500_70216885_70216995_70224553_70224630_70227734_70227823_70229263_70229319_70230755_70230855_70236078_70236176_70248404
transcript_11613.known	chr1	-	1584	8	FSM	ENSG00000134222.16	ENST00000369904.7	1584	8	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	167.246610044654	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGGAAGTCGATCCTGC	-109276838	True	NA	-11	True	AATAAA	-27	NA	109283115	109279555	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_109280157_109280395_109280490_109280776_109280917_109281107_109281252_109281618_109282061_109282517_109282576_109282679_109282732_109283062
transcript_11614.nic	chr1	-	1680	8	NIC	ENSG00000134222.16	novel	1584	8	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_3	160.201403851272	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTCTGTATATCTGGAA	NA	False	NA	-22	True	AATAAA	-16	NA	109283217	109279566	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_109280157_109280395_109280490_109280776_109280917_109281107_109281252_109281618_109282061_109282517_109282576_109282679_109282737_109283062
transcript_116146.known	chr2	-	2524	10	FSM	ENSG00000115998.8	ENST00000264434.7	2524	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_9	9.19473816247876	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATATCTCATGGTTGCCTG	-70190483	True	NA	NA	False	AATAAA	-24	NA	70191019	70149884	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70150565_70160624_70160788_70165091_70165193_70165527_70165636_70169556_70169662_70175672_70175778_70179531_70179643_70181162_70181998_70182666_70182936_70190972
transcript_116147.nic	chr2	-	1100	10	ISM	ENSG00000116001.17	ENST00000282574.8	3823	13	-97	5915	-17	0	5prime_fragment	FALSE	canonical	3	292	junction_5	72.3049099301009	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTTTTGAACATTTAC	-70248655	False	626	-3	True	AATAAA	-27	NA	70248677	70216118	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_70216293_70216403_70216500_70216885_70216995_70224553_70224630_70227734_70227823_70229058_70229092_70229263_70229319_70230755_70230855_70236078_70236176_70248404
transcript_116152.known	chr2	-	821	8	FSM	ENSG00000116001.17	ENST00000416149.6	821	8	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_3	67.4509648045247	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTAGACATTCGTGGGG	-70248432	False	NA	NA	False	ATTAAA	-18	NA	70248454	70216671	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70216995_70224553_70224630_70227734_70227823_70229058_70229092_70229263_70229319_70230755_70230855_70236078_70236176_70248404
transcript_116164.known	chr2	+	5339	6	FSM	ENSG00000116005.12	ENST00000433351.7	5339	6	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_3	22.0581050863396	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTCTTTTGCTTCTG	70250803	True	NA	16	True	AATAAA	-15	NA	70258136	70281185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_70258277_70259359_70259567_70261211_70261387_70274958_70275171_70275513_70275667_70276733
transcript_11617.nic	chr1	-	1689	8	NIC	ENSG00000134222.16	novel	1584	8	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_3	171.60823918187	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTCTGTATATCTGGAA	-109276901	True	NA	-22	True	AATAAA	-16	NA	109283178	109279566	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_109280157_109280395_109280490_109280776_109280970_109281107_109281252_109281618_109282061_109282517_109282576_109282679_109282732_109283062
transcript_116174.known	chr2	-	515	5	FSM	ENSG00000143977.14	ENST00000438261.5	515	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3708.89716593761	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTTCTCAGATGTTCTG	-70293438	False	NA	-75	True	AATAAA	-19	NA	70293448	70281504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70281685_70288067_70288193_70289349_70289373_70291280_70291310_70293290
transcript_116175.known	chr2	-	594	4	FSM	ENSG00000143977.14	ENST00000272348.7	594	4	0	0	0	0	multi-exon	FALSE	canonical	3	4359	junction_2	2135.76699727912	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTCTGTCCATCATCTT	-70249324	True	NA	-3	True	ATTAAA	-38	NA	70293740	70281361	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70281685_70288067_70288193_70289349_70289373_70293617
transcript_116177.known	chr2	-	566	3	FSM	ENSG00000143977.14	ENST00000429728.1	566	3	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_2	4291	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGATTCCTTCTGTCCATC	-70249324	True	NA	-8	True	ATTAAA	-33	NA	70293740	70281366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70281685_70288067_70288193_70293617
transcript_116180.known	chr2	-	393	3	FSM	ENSG00000143977.14	ENST00000488400.1	393	3	0	0	0	0	multi-exon	FALSE	canonical	3	4359	junction_1	80.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACGGCAGTTACTCAGCT	-70249314	True	NA	NA	False	NA	NA	NA	70293730	70287935	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70288193_70289349_70289373_70293617
transcript_116183.known	chr2	-	936	4	FSM	ENSG00000035141.8	ENST00000450256.1	936	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	898.743938319846	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCCCTGTAACAAGCCAGA	-70278681	True	NA	NA	False	NA	NA	NA	70302056	70297010	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70297478_70300839_70300981_70301407_70301604_70301924
transcript_116186.known	chr2	-	2107	3	FSM	ENSG00000035141.8	ENST00000430566.6	2107	3	0	0	0	0	multi-exon	TRUE	canonical	2	26	junction_2	963.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGAGTCTTCTTTCCTT	-70278692	True	NA	-3	True	AATAAA	-22	NA	70302067	70295975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70297478_70300839_70300981_70301603
transcript_116187.known	chr2	-	518	3	FSM	ENSG00000035141.8	ENST00000438759.1	518	3	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_2	963.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGCTGGGAGTAAGGAG	-70278619	True	NA	-98	True	NA	NA	NA	70301994	70297425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70297478_70300839_70300981_70301669
transcript_116188.known	chr2	-	1810	3	FSM	ENSG00000035141.8	ENST00000037869.7	1810	3	0	0	0	0	multi-exon	FALSE	canonical	3	1916	junction_2	18.5	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGAGTCTTCTTTCCTTA	-70278715	True	NA	-2	True	AATAAA	-23	NA	70302090	70295974	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70297478_70300839_70300981_70301924
transcript_116189.known	chr2	-	2398	3	FSM	ENSG00000035141.8	ENST00000460307.1	2398	3	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	930.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGAGTCTTCTTTCCTT	-70278681	True	NA	-3	True	AATAAA	-22	NA	70302056	70295975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70297478_70300839_70301604_70301924
transcript_11619.nic	chr1	-	1733	8	NIC	ENSG00000134222.16	novel	1742	8	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_3	164.833868126768	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTCTGTATATCTGGAA	NA	False	NA	-22	True	AATAAA	-16	NA	109283217	109279566	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_109280157_109280395_109280490_109280776_109280970_109281107_109281252_109281618_109282061_109282517_109282576_109282679_109282737_109283062
transcript_116192.known	chr2	-	561	2	FSM	ENSG00000035141.8	ENST00000498665.1	561	2	0	0	0	0	multi-exon	FALSE	canonical	3	1916	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATACAAAAAATTAGCC	-70278637	True	NA	NA	False	NA	NA	NA	70302012	70300507	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70300981_70301924
transcript_116193.known	chr2	-	1225	6	FSM	ENSG00000163235.16	ENST00000418333.6	1225	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	2.92574776766556	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAATGATGTATGTGTTG	-70553809	False	37	NA	False	TATAAA	-18	NA	70553826	70450172	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70450867_70453217_70453328_70456338_70456489_70465615_70465734_70514858_70514913_70553727
transcript_116194.known	chr2	-	4117	6	FSM	ENSG00000163235.16	ENST00000295400.11	4117	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	2.24499443206436	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGACTGGAGTGTTTCTT	-70553809	False	37	-2	True	AATGAA	-16	NA	70553826	70447283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70450867_70453217_70453328_70456338_70456489_70465615_70465737_70514858_70514913_70553727
transcript_116195.known	chr2	-	2654	17	FSM	ENSG00000075340.23	ENST00000355733.7	2654	17	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	74.6497812706106	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCGAACCCCCTCCTTCC	-70759808	True	NA	-50	True	AAAAAG	-3	NA	70768177	70663482	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70663736_70672877_70673007_70673240_70673327_70674677_70674826_70676795_70676886_70677757_70677878_70678703_70678962_70683590_70683768_70688023_70688123_70690785_70690930_70692402_70692553_70695720_70695802_70696244_70696397_70704320_70704460_70706225_70706443_70713065_70713185_70767885
transcript_116207.known	chr2	-	3741	16	FSM	ENSG00000075340.23	ENST00000407644.6	3741	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	61.6400302833583	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACCGTGTCTTGAAAGAAT	-70767695	False	NA	50	True	NA	NA	NA	70767715	70662129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70663736_70672877_70673007_70674677_70674826_70676795_70676886_70677757_70677878_70678703_70678962_70683590_70683768_70688023_70688123_70690785_70690930_70692402_70692553_70695720_70695802_70696244_70696397_70704320_70704460_70706225_70706443_70713065_70713185_70767603
transcript_116208.known	chr2	-	9290	16	FSM	ENSG00000075340.23	ENST00000264436.9	9290	16	0	0	0	0	multi-exon	TRUE	canonical	3	188	junction_13	23.2828024277338	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGCCCCATCTCTG	-70759831	True	NA	-3	True	AGTAAA	-22	NA	70768200	70656783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70663736_70672877_70673007_70674677_70674826_70676795_70676886_70677757_70677878_70678703_70678962_70683590_70683768_70688023_70688123_70690785_70690930_70692402_70692553_70695720_70695802_70696244_70696397_70704320_70704460_70706225_70706443_70713065_70713185_70767885
transcript_116226.known	chr2	-	3776	13	FSM	ENSG00000075340.23	ENST00000413157.6	3776	13	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_10	21.704294249961	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCGGGAGCATCCTTTGA	-70759843	True	NA	-24	True	AATAAA	-16	NA	70768212	70675092	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70676886_70677757_70677878_70678703_70678962_70683590_70683768_70688023_70688123_70690785_70690930_70692402_70692553_70695720_70695802_70696244_70696397_70704320_70704460_70706225_70706443_70713065_70713185_70767885
transcript_116233.nic	chr2	+	1201	10	NIC	ENSG00000124357.13	novel	1801	10	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	73.6987528581014	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGACTGCATTATCAAACA	NA	False	NA	14	True	AATAAA	-22	NA	71068274	71078641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_71068337_71070501_71070587_71070740_71070840_71071685_71071828_71072640_71072752_71073481_71073595_71075554_71075643_71076603_71076702_71077557_71077637_71078317
transcript_116234.known	chr2	+	2371	10	FSM	ENSG00000124357.13	ENST00000244204.11	2371	10	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_1	21.5910360915398	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTTGTCTACTCCCCTC	71066590	True	NA	NA	False	AATAAA	-15	NA	71068647	71079808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_71068713_71070501_71070587_71070740_71070840_71071685_71071828_71072640_71072752_71073481_71073595_71075554_71075643_71076603_71076702_71077557_71077637_71078317
transcript_11624.known	chr1	-	1717	8	FSM	ENSG00000134222.16	ENST00000369907.7	1717	8	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_7	132.053483289838	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGGAAGTCGATCCTGC	-109276870	True	NA	-11	True	AATAAA	-27	NA	109283147	109279555	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679_109282732_109283062
transcript_116240.known	chr2	+	2343	9	FSM	ENSG00000124357.13	ENST00000418807.7	2343	9	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	79.9277017059793	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGTTTTTGTCTACTCCC	71066530	True	NA	NA	False	AATAAA	-12	NA	71068587	71079805	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_71068713_71070740_71070840_71071685_71071828_71072640_71072752_71073481_71073595_71075554_71075643_71076603_71076702_71077557_71077637_71078317
transcript_116248.known	chr2	-	3365	6	FSM	ENSG00000144043.12	ENST00000272438.9	3365	6	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_4	12.8840987267251	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTGTAGTGATGTGTAC	-70993329	True	NA	NA	False	AATAAA	-16	NA	70994873	70985941	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70988716_70988914_70989018_70989748_70989817_70991829_70991984_70993695_70993776_70994687
transcript_116250.known	chr2	-	758	5	FSM	ENSG00000144043.12	ENST00000433258.5	758	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	53.6860084193265	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCTCAGTCCTCCCCTGT	-70993288	True	NA	NA	False	NA	NA	NA	70994832	70988353	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_70988716_70988914_70989018_70989748_70989817_70993695_70993776_70994687
transcript_116254.known	chr2	+	2986	9	FSM	ENSG00000124357.13	ENST00000475709.5	2986	9	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_2	18.9670767383907	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAATTGGACTGCATTATC	71066592	True	NA	9	True	AATAAA	-17	NA	71068649	71078636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_71070587_71070740_71070840_71071685_71071828_71072640_71072752_71073481_71073595_71075554_71075643_71076603_71076702_71077557_71077637_71078317
transcript_116258.nic	chr2	-	1316	3	NIC	ENSG00000124370.11	novel	824	3	NA	NA	-19	0	intron_retention	FALSE	canonical	3	61	junction_2	42.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGGGGTAATTGAATGTA	-71127672	True	NA	-9	True	AATAAA	-15	NA	71130258	71109686	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_71110123_71124205_71124544_71129716
transcript_116259.known	chr2	-	824	3	FSM	ENSG00000124370.11	ENST00000244217.6	824	3	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	22	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGGGGTAATTGAATGTA	-71127643	True	NA	-9	True	AATAAA	-15	NA	71130229	71109686	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_71110123_71124205_71124544_71130179
transcript_11626.known	chr1	-	1742	8	FSM	ENSG00000134222.16	ENST00000369909.6	1742	8	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_7	121.929052639439	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTGGAAGTCGATCCTG	-109276891	True	NA	-12	True	AATAAA	-26	NA	109283168	109279556	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679_109282737_109283062
transcript_116266.known	chr2	+	2164	11	FSM	ENSG00000124383.9	ENST00000244230.7	2164	11	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_7	19.3277003288027	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGCATCGATGACAGATA	71125623	True	NA	16	True	AATAAA	-17	NA	71130633	71150101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_71130755_71132897_71133577_71133947_71134106_71134625_71134798_71138489_71138632_71139794_71139863_71141231_71141370_71144427_71144539_71147998_71148107_71149222_71149454_71149865
transcript_116270.nic	chr2	+	2096	10	ISM	ENSG00000124383.9	ENST00000244230.7	2164	11	-334	814	-332	0	5prime_fragment	FALSE	canonical	3	298	junction_7	16.5536911701899	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCGAAGGAAAAAGAAATATC	71130277	False	NA	-19	True	TATAAA	-40	NA	71130299	71149287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_71130755_71132897_71133577_71133947_71134106_71134625_71134798_71138489_71138632_71139794_71139863_71141231_71141370_71144427_71144539_71147998_71148107_71149222
transcript_116271.known	chr2	+	2068	5	FSM	ENSG00000124383.9	ENST00000498451.2	2068	5	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_2	12.1526746027366	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTCATCTCATTGACT	71125621	True	NA	NA	False	ATTAAA	-21	NA	71130631	71139425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_71130755_71132897_71133577_71133947_71134106_71134625_71134798_71138489
transcript_116273.nic	chr2	+	1453	4	ISM	ENSG00000124383.9	ENST00000498451.2	2068	5	-322	4629	-322	1628	5prime_fragment	FALSE	canonical	3	313	junction_2	13.9522996909709	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAATTAGTAATTTAAGGA	71130272	True	NA	NA	False	AAAAAG	-10	NA	71130309	71134796	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_71130755_71132897_71133577_71133947_71134106_71134625
transcript_116274.nic	chr2	+	1363	2	ISM	ENSG00000124383.9	ENST00000498451.2	2068	5	-672	5960	-672	297	5prime_fragment	FALSE	canonical	3	347	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGGAACGAAAAGATGA	71129937	True	NA	NA	False	AAAACA	-9	NA	71129959	71133465	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_71130755_71132897
transcript_116275.known	chr2	+	483	2	FSM	ENSG00000124383.9	ENST00000468427.1	483	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATAGAGGCTGATGACAA	71125623	True	NA	NA	False	NA	NA	NA	71130633	71133168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_71130846_71132897
transcript_116276.known	chr2	-	6300	4	FSM	ENSG00000124374.9	ENST00000244221.9	6300	4	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	18.3847763108502	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGGCAGTGGTACCCT	-71220458	True	NA	-15	True	AATAAA	-13	NA	71227103	71182737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_71188536_71189844_71190022_71202451_71202601_71226927
transcript_11628.known	chr1	-	1710	8	FSM	ENSG00000134222.16	ENST00000369903.6	1710	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	165.841576727395	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGAATGTATTTTTATA	-109276845	True	NA	-40	True	NA	NA	NA	109283122	109279584	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679_109282790_109283073
transcript_116281.known	chr2	+	6487	28	FSM	ENSG00000075292.19	ENST00000264447.9	6487	28	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	105.612356387278	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTTTGTGGCTGATTT	71320315	True	NA	NA	False	AATAAA	-28	NA	71331781	71435061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_71331876_71348752_71350272_71355718_71355781_71363152_71363192_71363953_71364253_71365428_71365707_71368381_71368529_71369882_71370006_71380221_71380281_71380512_71380566_71396140_71396192_71398700_71398773_71399558_71399646_71400111_71400181_71400477_71400519_71401955_71402088_71403869_71403999_71405600_71405643_71406127_71406263_71408121_71408248_71418601_71418640_71422813_71424039_71424649_71424716_71426459_71427415_71428546_71428652_71431326_71431429_71433164_71433284_71434741
transcript_116316.known	chr2	+	3518	13	FSM	ENSG00000075292.19	ENST00000410075.5	3518	13	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_10	167.139392092017	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGCGGCTCCAGCTTATC	71273461	True	NA	6	True	AATAAA	-2	NA	71276592	71395670	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_71276755_71348752_71350272_71355718_71355781_71363152_71363192_71363953_71364253_71365428_71365707_71368381_71368529_71369882_71370006_71380221_71380281_71380512_71380566_71388622_71388724_71393393_71393646_71395246
transcript_116346.nic	chr2	+	2657	8	ISM	ENSG00000075292.19	ENST00000410075.5	3518	13	-34	25671	-2	4294	5prime_fragment	FALSE	canonical	3	84	junction_1	115.047461368545	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAGGTAATCTGGATTTA	71273427	True	NA	47	True	GATAAA	-41	NA	71276558	71369999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_71276755_71348752_71350272_71355718_71355781_71363152_71363192_71363953_71364253_71365428_71365707_71368381_71368529_71369882
transcript_116347.nic	chr2	+	2649	8	ISM	ENSG00000075292.19	ENST00000264447.9	6487	28	-94	65062	-40	4294	5prime_fragment	FALSE	canonical	3	119	junction_1	103.28976478918	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAGGTAATCTGGATTTA	71320221	True	NA	47	True	GATAAA	-41	NA	71331687	71369999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_71331876_71348752_71350272_71355718_71355781_71363152_71363192_71363953_71364253_71365428_71365707_71368381_71368529_71369882
transcript_116349.nic	chr2	+	2615	8	NIC	ENSG00000075292.19	novel	6821	28	NA	NA	-16	4294	combination_of_known_junctions	FALSE	canonical	3	155	junction_1	91.3305277884807	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAGGTAATCTGGATTTA	71320245	True	NA	47	True	GATAAA	-41	NA	71331711	71369999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_71331866_71348752_71350272_71355718_71355781_71363152_71363192_71363953_71364253_71365428_71365707_71368381_71368529_71369882
transcript_116350.known	chr2	+	6821	28	FSM	ENSG00000075292.19	ENST00000409544.5	6821	28	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_1	117.541482039321	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTTTGTGGCTGATTT	71320297	True	NA	NA	False	AATAAA	-28	NA	71331763	71435061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_71331866_71348426_71350272_71355718_71355781_71363152_71363192_71363953_71364253_71365428_71365707_71368381_71368529_71369882_71370006_71380221_71380281_71380512_71380566_71396140_71396192_71398700_71398773_71399558_71399646_71400111_71400181_71400477_71400519_71401955_71402088_71403869_71403999_71405600_71405643_71406127_71406263_71408121_71408248_71418601_71418640_71422813_71424039_71424649_71424716_71426459_71427415_71428546_71428652_71431326_71431429_71433164_71433284_71434741
transcript_116358.nic	chr2	+	1059	7	NIC	ENSG00000075292.19	novel	6487	28	NA	NA	-1	4294	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	141.952750354945	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAGGTAATCTGGATTTA	71320292	True	NA	47	True	GATAAA	-41	NA	71331758	71369999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_71331876_71355718_71355781_71363152_71363192_71363953_71364253_71365428_71365707_71368381_71368529_71369882
transcript_116359.nic	chr2	+	1046	7	NIC	ENSG00000075292.19	novel	6821	28	NA	NA	0	4294	combination_of_known_junctions	FALSE	canonical	2	36	junction_1	141.588213570983	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAGGTAATCTGGATTTA	71320295	True	NA	47	True	GATAAA	-41	NA	71331761	71369999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_71331866_71355718_71355781_71363152_71363192_71363953_71364253_71365428_71365707_71368381_71368529_71369882
transcript_116370.known	chr2	+	590	5	FSM	ENSG00000075292.19	ENST00000475743.1	590	5	0	0	0	0	multi-exon	FALSE	canonical	2	36	junction_1	163.121886943475	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGGACATTCACCAGCACA	71320295	True	NA	NA	False	AATAAA	-25	NA	71331761	71365514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_71331866_71355718_71355781_71363152_71363192_71363953_71364253_71365428
transcript_116376.known	chr2	+	871	5	FSM	ENSG00000075292.19	ENST00000494621.5	871	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	161.850818657182	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAATTCTTTAATTAATAA	71273429	True	NA	NA	False	GATAAA	-21	NA	71276560	71365705	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_71276755_71355718_71355781_71363152_71363192_71363953_71364253_71365428
transcript_116379.known	chr2	+	574	4	FSM	ENSG00000075292.19	ENST00000601581.3	574	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	193.36379070435	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGTGCAACAGCTCCATAAT	NA	False	NA	NA	False	NA	NA	NA	71365428	71375335	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_71365707_71368381_71368529_71369882_71370006_71375309
transcript_116380.known	chr2	+	6769	56	FSM	ENSG00000135636.15	ENST00000413539.6	6769	56	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_6	15.1366666636334	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGCTAACATGGAGCTCT	71453685	False	NA	NA	False	NA	NA	NA	71453721	71686648	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_71454087_71480882_71480939_71481878_71481971_71503213_71503320_71511806_71511922_71513239_71513333_71513715_71513922_71515622_71515752_71516179_71516243_71516988_71517040_71520177_71520209_71520788_71520905_71526219_71526347_71528297_71528402_71535020_71535090_71535267_71535312_71539156_71539240_71549349_71549392_71551040_71551157_71551606_71551721_71553010_71553189_71553806_71553932_71555964_71556072_71561751_71561945_71564057_71564214_71567950_71568083_71568171_71568339_71569819_71569935_71570228_71570335_71570598_71570742_71574197_71574372_71589592_71589687_71590210_71590289_71598563_71598746_71600701_71600843_71601498_71601529_71602775_71602806_71611244_71611347_71611464_71611627_71612640_71612807_71613333_71613411_71643964_71644064_71656161_71656291_71658877_71659034_71660559_71660652_71664267_71664439_71665161_71665305_71667375_71667516_71668753_71668843_71669111_71669208_71669604_71669747_71674196_71674297_71679056_71679236_71681000_71681111_71682529_71682678_71686453
transcript_116381.known	chr2	+	6739	56	FSM	ENSG00000135636.15	ENST00000429174.6	6739	56	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_40	14.3613807204721	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGCTAACATGGAGCTCT	71453685	False	NA	NA	False	NA	NA	NA	71453721	71686648	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_71454087_71480882_71480939_71481878_71481971_71503213_71503320_71511806_71511922_71513715_71513922_71515622_71515752_71516179_71516243_71516988_71517040_71520177_71520209_71520788_71520905_71526219_71526347_71528297_71528402_71535020_71535090_71535267_71535312_71539156_71539240_71549349_71549392_71551040_71551157_71551606_71551721_71553010_71553189_71553806_71553932_71555964_71556072_71561751_71561945_71564057_71564214_71567950_71568083_71568171_71568339_71569819_71569935_71570228_71570335_71570598_71570742_71574197_71574372_71589592_71589687_71590210_71590289_71598563_71598746_71600701_71600843_71601498_71601529_71602775_71602806_71611244_71611347_71611464_71611627_71612640_71612807_71613333_71613411_71620546_71620610_71643964_71644064_71656161_71656291_71658877_71659034_71660559_71660652_71664267_71664439_71665161_71665305_71667375_71667516_71668753_71668843_71669111_71669208_71669604_71669747_71674196_71674297_71679056_71679236_71681000_71681111_71682529_71682678_71686453
transcript_116382.nic	chr2	+	3148	5	ISM	ENSG00000135636.15	ENST00000258104.8	6952	55	-6	172595	-6	-56748	intron_retention	FALSE	canonical	3	43	junction_2	4.43705983732471	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACTGCAGAGATTCAGCA	NA	False	NA	NA	False	NA	NA	NA	71453554	71514168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_71454087_71480882_71480939_71481878_71481971_71503213_71503320_71511806
transcript_116384.known	chr2	-	2583	23	FSM	ENSG00000144036.16	ENST00000634650.1	2583	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	46.5994892321173	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCTGCAGCCTCTGTGT	-72818540	True	NA	NA	False	NA	NA	NA	72826019	72179308	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_72179462_72182893_72182906_72184074_72184188_72334946_72335021_72379728_72379871_72465159_72465340_72480615_72480751_72492317_72492430_72495429_72495540_72496453_72496560_72498453_72498552_72499900_72499973_72513131_72513253_72514633_72514681_72515042_72515127_72559452_72559522_72575491_72575669_72718102_72718308_72731006_72731053_72731154_72731246_72733070_72733119_72741303_72741470_72825797
transcript_116385.known	chr2	-	5910	22	FSM	ENSG00000144036.16	ENST00000272427.11	5910	22	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_3	15.5333012174495	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTGTTGTCTCATGGGTAT	-72818554	True	NA	-1	True	ATTAAA	-33	NA	72826033	72175983	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_72179462_72184074_72184188_72334946_72335021_72379728_72379871_72465159_72465340_72480615_72480751_72492317_72492430_72495429_72495540_72496453_72496560_72498453_72498552_72499900_72499973_72513131_72513253_72514633_72514681_72515042_72515127_72559452_72559522_72575491_72575669_72718102_72718308_72731006_72731053_72731154_72731246_72733070_72733119_72741303_72741470_72825797
transcript_116389.known	chr2	-	5795	18	FSM	ENSG00000144036.16	ENST00000410104.1	5795	18	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_3	14.2879434741226	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAGATGTGATCTTAT	-72818562	True	NA	NA	False	ATTAAA	-26	NA	72826041	72461475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_72465340_72480615_72480751_72492317_72492430_72495429_72495540_72496453_72496560_72498453_72498552_72499900_72499973_72513131_72513253_72514633_72514681_72515042_72515127_72559452_72559522_72575491_72575669_72718102_72718308_72731006_72731053_72731154_72731246_72733070_72733119_72741303_72741470_72825797
transcript_116394.known	chr2	+	1432	3	FSM	ENSG00000116096.6	ENST00000234454.6	1432	3	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	13	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATGCTTGCTTTCTCCTC	72886962	True	NA	4	True	AATAAA	-18	NA	72887407	72892158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_72887737_72888313_72888605_72891346
transcript_116395.known	chr2	+	947	3	FSM	ENSG00000116096.6	ENST00000498749.1	947	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	53.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCTTAGGAGAGAGGTTA	72886936	True	NA	NA	False	NA	NA	NA	72887381	72891753	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_72887737_72888419_72888605_72891346
transcript_116398.nic	chr2	+	2390	2	NIC	ENSG00000116096.6	novel	1432	3	NA	NA	-355	0	intron_retention	FALSE	canonical	3	110	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATGCTTGCTTTCTCCTC	NA	False	NA	4	True	AATAAA	-18	NA	72887026	72892158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_72888605_72891346
transcript_116399.known	chr2	+	480	3	FSM	ENSG00000135638.14	ENST00000473732.1	480	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	4	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGCTCCGCGGTCTCCCAG	72918168	False	NA	NA	False	NA	NA	NA	72918180	72925541	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_72918373_72924308_72924494_72925438
transcript_116400.known	chr2	+	2144	3	FSM	ENSG00000135638.14	ENST00000258106.11	2144	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	7	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCCTCCTCAGCCCAAGA	72917354	True	NA	NA	False	NA	NA	NA	72917518	72934891	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_72918373_72924308_72924494_72933786
transcript_116407.known	chr2	-	4016	14	FSM	ENSG00000144040.13	ENST00000272433.7	4016	14	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	44.0928283827756	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGGTGTGGTTTTGTGAA	-73069448	True	NA	-2	True	AATAAA	-17	NA	73071712	72942035	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_72945100_72961130_72961249_72968447_72968534_72971569_72971686_72988257_72988349_72998948_72999015_73000430_73000488_73001524_73001579_73020238_73020265_73022521_73022577_73023187_73023215_73040853_73040932_73058527_73058597_73071603
transcript_116408.nnic	chr2	-	3993	14	NNC	ENSG00000144040.13	novel	4016	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	57.1706673662342	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGGTGTGGTTTTGTGAA	-73069448	True	NA	-2	True	AATAAA	-17	NA	73071712	72942035	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_72945100_72961130_72961249_72968447_72968534_72971569_72971686_72988280_72988349_72998948_72999015_73000430_73000488_73001524_73001579_73020238_73020265_73022521_73022577_73023187_73023215_73040853_73040932_73058527_73058597_73071603
transcript_116411.nnic	chr2	-	4012	13	NIC	ENSG00000144040.13	novel	4016	14	NA	NA	-49	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_12	46.3264383358886	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGGTGTGGTTTTGTGAA	-73071764	False	NA	-2	True	AATAAA	-17	NA	73071777	72942035	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_72945100_72961130_72961249_72968447_72968534_72971569_72971686_72988257_72988349_72998948_72999015_73000430_73000488_73001524_73001579_73020238_73020265_73022521_73022577_73023187_73023215_73040853_73040932_73071603
transcript_116415.nic	chr2	-	3933	13	NIC	ENSG00000144040.13	novel	4016	14	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	54.7301460704143	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGGTGTGGTTTTGTGAA	-73069483	True	NA	-2	True	AATAAA	-17	NA	73071747	72942035	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_72945100_72968447_72968534_72971569_72971686_72988257_72988349_72998948_72999015_73000430_73000488_73001524_73001579_73020238_73020265_73022521_73022577_73023187_73023215_73040853_73040932_73058527_73058597_73071603
transcript_116418.known	chr2	-	840	12	FSM	ENSG00000144040.13	ENST00000410065.5	840	12	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	58.655881177374	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTCAGCGGCCTGGGG	-73069460	True	NA	NA	False	NA	NA	NA	73071724	72945021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_72945100_72961130_72961249_72988257_72988349_72998948_72999015_73000430_73000488_73001524_73001579_73020238_73020265_73022521_73022577_73023187_73023215_73040853_73040932_73058527_73058597_73071603
transcript_116428.known	chr2	-	1690	3	FSM	ENSG00000144040.13	ENST00000472259.5	1690	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	11	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCACAGTTAGTGTAAGATA	-73071253	False	2264	NA	False	TATAAA	-30	NA	73071266	73049085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_73049900_73058527_73058597_73070459
transcript_116429.nic	chr2	-	1057	3	NIC	ENSG00000144040.13	novel	1690	3	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	101.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCACAGTTAGTGTAAGATA	-73071764	False	NA	NA	False	TATAAA	-30	NA	73071777	73049085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_73049900_73058527_73058597_73071603
transcript_116433.known	chr2	-	351	3	FSM	ENSG00000144040.13	ENST00000484123.1	351	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	91.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCAGTGTTGCTGACTGTT	-73071649	False	NA	-4	True	AATAAA	-39	NA	73071662	73053328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_73053552_73058527_73058597_73071603
transcript_116440.known	chr2	-	6285	6	FSM	ENSG00000135631.17	ENST00000486777.7	6285	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	16.1046577113579	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGCTCTGTTGTGTTCCT	-73111886	True	NA	-4	True	AATAAA	-17	NA	73112948	73073381	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_73075725_73075992_73076183_73079650_73081664_73088049_73088750_73088878_73089316_73112346
transcript_116444.known	chr2	-	4342	5	FSM	ENSG00000135631.17	ENST00000258098.6	4342	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	16.7107749670684	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGCTCTGTTGTGTTCCT	-73112998	False	NA	-4	True	AATAAA	-17	NA	73113018	73073381	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_73075725_73075992_73076183_73088049_73088750_73088878_73089316_73112346
transcript_116446.known	chr2	+	420	2	FSM	ENSG00000272702.1	ENST00000608612.1	420	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATATTTAAGTGTTCACT	NA	False	NA	2	True	AATAAA	-13	NA	73113017	73113630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73113207_73113399
transcript_116448.nic	chr2	+	2691	13	NIC	ENSG00000135632.12	novel	2554	13	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	71.479989429832	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCTCTGCAGGAATGCT	73210237	True	NA	13	True	AATAAA	-14	NA	73214206	73227221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_73214363_73218860_73218970_73219951_73220191_73220660_73220783_73221164_73221235_73221825_73221931_73222754_73222818_73223035_73223107_73223425_73223533_73223946_73224004_73224865_73224961_73225630_73225702_73225795
transcript_116449.known	chr2	+	2554	13	FSM	ENSG00000135632.12	ENST00000389501.9	2554	13	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_5	15.3920975395385	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCTCTGCAGGAATGCT	73210275	True	NA	13	True	AATAAA	-14	NA	73214244	73227221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73214363_73218860_73218970_73220050_73220191_73220660_73220783_73221164_73221235_73221825_73221931_73222754_73222818_73223035_73223107_73223425_73223533_73223946_73224004_73224865_73224961_73225630_73225702_73225795
transcript_116450.nnic	chr2	+	2553	13	NNC	ENSG00000135632.12	novel	2554	13	NA	NA	-15	5	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_12	73.858488942632	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCAGGAATGCTTTGTG	73210237	True	NA	18	True	AATAAA	-19	NA	73214206	73227226	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_73214363_73218860_73218970_73220050_73220191_73220660_73220783_73221164_73221235_73221825_73221931_73222754_73222818_73223035_73223107_73223425_73223533_73223946_73224004_73224865_73224961_73225630_73225702_73225839
transcript_116452.nic	chr2	+	2686	12	ISM	ENSG00000135632.12	ENST00000389501.9	2554	13	-38	0	-15	0	intron_retention	FALSE	canonical	3	241	junction_5	15.3175748463506	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCTCTGCAGGAATGCT	73210237	True	NA	13	True	AATAAA	-14	NA	73214206	73227221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_73214363_73218860_73218970_73220050_73220191_73220660_73220783_73221164_73221235_73221825_73221931_73222754_73222818_73223035_73223107_73223425_73223533_73223946_73224004_73224865_73224961_73225630
transcript_11646.known	chr1	-	1730	8	FSM	ENSG00000134222.16	ENST00000409267.5	1730	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	157.896375215274	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGGAAGTCGATCCTGC	-109276848	True	NA	-11	True	AATAAA	-27	NA	109283125	109279555	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679_109282732_109283027
transcript_116461.known	chr2	-	1090	5	FSM	ENSG00000135617.4	ENST00000258083.3	1090	5	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	13.1600721882519	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACTGTGTCCTAGAATAA	-73232247	True	NA	-4	True	AATAAA	-42	NA	73233239	73228009	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_73228575_73228794_73228963_73229460_73229571_73230112_73230214_73233093
transcript_116466.known	chr2	+	2031	13	FSM	ENSG00000135624.17	ENST00000539919.5	2031	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1402.03806761998	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGGCATGGTACTCATA	73181756	True	NA	41	True	AATAAA	-30	NA	73234235	73253021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73234385_73235549_73235646_73239642_73239797_73240436_73240544_73243003_73243130_73243996_73244050_73244543_73244716_73247761_73247927_73248990_73249180_73249818_73249917_73250305_73250439_73251225_73251433_73252639
transcript_116469.known	chr2	+	1847	12	FSM	ENSG00000135624.17	ENST00000258091.10	1847	12	0	0	0	0	multi-exon	FALSE	canonical	3	3375	junction_1	269.770609626367	4146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAACTTTGTAAATTATTT	73181828	True	NA	25	True	AATAAA	-14	NA	73234307	73253005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73234385_73239642_73239797_73240436_73240544_73243003_73243130_73243996_73244050_73244543_73244716_73247761_73247927_73248990_73249180_73249818_73249917_73250305_73250439_73251225_73251433_73252639
transcript_11647.known	chr1	-	1826	7	FSM	ENSG00000134222.16	ENST00000409138.6	1826	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_6	151.940138066133	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTGTATATCTGGAAGT	-109276909	True	NA	-20	True	AATAAA	-18	NA	109283186	109279564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_109280157_109280395_109280490_109280776_109281252_109281618_109282061_109282517_109282576_109282679_109282732_109283073
transcript_11648.known	chr1	-	839	4	FSM	ENSG00000134222.16	ENST00000459765.1	839	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	199.1520915169	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGATGGTGATGTGGTGA	-109276868	True	NA	NA	False	AATAAA	-19	NA	109283145	109281403	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_109282061_109282517_109282576_109282679_109282732_109283073
transcript_116489.known	chr2	+	1674	10	FSM	ENSG00000135624.17	ENST00000540468.5	1674	10	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	1179.41354960321	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGGCATGGTACTCATA	73181756	True	NA	41	True	AATAAA	-30	NA	73234235	73253021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73234385_73243003_73243130_73243996_73244050_73244543_73244716_73247761_73247927_73248990_73249180_73249818_73249917_73250305_73250439_73251225_73251433_73252639
transcript_11649.nic	chr1	-	7012	20	NIC	ENSG00000134243.12	novel	6990	20	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	168	junction_13	78.2868509069738	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTACTGAAATGACTAAGCT	-109392270	True	NA	-14	True	AATAAA	-24	NA	109397943	109309574	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_109314058_109314260_109314385_109314671_109314779_109316849_109316959_109317852_109317970_109322931_109323122_109324898_109325090_109326991_109327161_109327498_109327602_109336239_109336347_109340723_109340880_109342013_109342159_109345750_109345879_109347482_109347533_109350928_109351003_109354366_109354532_109355366_109355470_109367407_109367482_109369529_109369590_109397586
transcript_116493.known	chr2	+	1234	7	FSM	ENSG00000135624.17	ENST00000398422.2	1234	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	1448.38055158933	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAACTTTGTAAATTATT	73181828	True	NA	24	True	AATAAA	-13	NA	73234307	73253004	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73234385_73247761_73247927_73248990_73249180_73249818_73249917_73250305_73250439_73251225_73251433_73252639
transcript_116495.known	chr2	-	2372	2	FSM	ENSG00000135625.8	ENST00000545030.1	2372	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAATCTGCCATGTAAGC	NA	False	NA	NA	False	ATTAAA	-20	NA	73293701	73290929	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_73292782_73293181
transcript_116499.known	chr2	-	816	6	FSM	ENSG00000144034.16	ENST00000409716.6	816	6	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_4	360.68401683468	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTCCTGACTATAAAACTA	-73730690	True	NA	NA	False	ATTAAA	-17	NA	73737400	73729889	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_73730030_73730559_73730737_73732162_73732286_73732583_73732701_73734428_73734589_73737301
transcript_11650.known	chr1	-	6990	20	FSM	ENSG00000134243.12	ENST00000256637.8	6990	20	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_13	63.7184336056956	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTACTGAAATGACTAAGCT	-109392245	True	NA	-14	True	AATAAA	-24	NA	109397918	109309574	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_109314058_109314260_109314385_109314671_109314779_109316849_109316959_109317852_109317970_109322931_109323122_109324898_109325090_109326991_109327161_109327498_109327602_109336239_109336347_109340723_109340880_109342013_109342159_109345750_109345882_109347482_109347533_109350928_109351003_109354366_109354532_109355366_109355470_109367407_109367482_109369529_109369590_109397586
transcript_116500.nnic	chr2	-	787	6	NNC	ENSG00000144034.16	novel	819	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_5	398.721155696559	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTCCTGACTATAAAACTA	-73730635	True	NA	NA	False	ATTAAA	-17	NA	73737345	73729889	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_73730030_73730559_73730737_73732162_73732286_73734428_73734592_73736616_73736757_73737301
transcript_116503.known	chr2	-	664	5	FSM	ENSG00000144034.16	ENST00000272424.11	664	5	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_4	157.209255452725	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAATTGTGCATTATAGAAA	-73730635	True	NA	NA	False	ATTAAA	-34	NA	73737345	73729872	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_73730030_73730559_73730737_73732162_73732286_73734428_73734592_73737301
transcript_116505.nic	chr2	-	555	5	NIC	ENSG00000144034.16	novel	819	6	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_3	334.425159789152	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTCCTGACTATAAAACTA	-73730642	True	NA	NA	False	ATTAAA	-17	NA	73737352	73729889	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_73730030_73730559_73730737_73732162_73732286_73734527_73734592_73737301
transcript_116508.known	chr2	-	798	4	FSM	ENSG00000144034.16	ENST00000497464.5	798	4	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_3	174.021710012158	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATAGAAATTTGGTTTTT	-73730630	True	NA	-3	True	AATAAA	-19	NA	73737340	73730263	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_73730737_73732162_73732286_73734428_73734592_73737301
transcript_11651.nic	chr1	-	3405	20	NIC	ENSG00000134243.12	novel	6990	20	NA	NA	-93	551	combination_of_known_junctions	FALSE	canonical	3	168	junction_13	78.2868509069738	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATTTTTCAAGCTGTGC	NA	False	NA	-11	True	ATTAAA	-20	NA	109398011	109313249	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_109314058_109314260_109314385_109314671_109314779_109316849_109316959_109317852_109317970_109322931_109323122_109324898_109325090_109326991_109327161_109327498_109327602_109336239_109336347_109340723_109340880_109342013_109342159_109345750_109345879_109347482_109347533_109350928_109351003_109354366_109354532_109355366_109355470_109367407_109367482_109369529_109369590_109397586
transcript_116511.known	chr2	-	575	5	FSM	ENSG00000144034.16	ENST00000463231.5	575	5	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	373.007037467123	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCCTTGGTGATTTTA	-73730665	True	NA	NA	False	TTTAAA	-2	NA	73737375	73729168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_73729306_73730559_73730737_73732162_73732286_73734527_73734592_73737301
transcript_116512.known	chr2	-	1653	9	FSM	ENSG00000144048.10	ENST00000272444.7	1653	9	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_7	20.3834338373101	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTGTGGTATTTTTGTG	-73776585	True	NA	-2	True	NA	NA	NA	73780157	73762183	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_73762860_73766417_73766595_73766827_73766904_73767160_73767208_73769264_73769326_73773799_73773924_73774912_73775045_73778300_73778377_73779873
transcript_116513.known	chr2	+	2040	13	FSM	ENSG00000124356.17	ENST00000682379.1	2040	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_11	127.591225534256	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCCTTTTTCTTTTGTGT	73823248	True	NA	NA	False	ATTAAA	-25	NA	73828986	73873659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73829071_73829404_73829511_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202_73862305_73870142_73870353_73873351
transcript_116515.known	chr2	+	6280	12	FSM	ENSG00000124356.17	ENST00000682848.1	6280	12	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	99.6770819253705	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	73823248	True	NA	-1	True	AATAAA	-16	NA	73828986	73867152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73829071_73829404_73829511_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847573_73847662_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_116517.known	chr2	+	6316	11	FSM	ENSG00000124356.17	ENST00000684585.1	6316	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	100.670204132107	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	73823228	True	NA	-1	True	AATAAA	-16	NA	73828966	73867152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73828997_73829404_73829511_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_116518.known	chr2	+	6470	11	FSM	ENSG00000124356.17	ENST00000683728.1	6470	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	129.017053136397	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	73823222	True	NA	-1	True	AATAAA	-16	NA	73828960	73867152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73828997_73829404_73829511_73830844_73831060_73844812_73845037_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_116519.known	chr2	+	6370	11	FSM	ENSG00000124356.17	ENST00000394073.6	6370	11	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	58.881660982007	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	73823248	True	NA	-1	True	AATAAA	-16	NA	73828986	73867152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73829071_73829404_73829511_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_116520.known	chr2	+	6516	11	FSM	ENSG00000124356.17	ENST00000682784.1	6516	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	104.902049550998	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	73823250	True	NA	-1	True	AATAAA	-16	NA	73828988	73867152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73829071_73829404_73829511_73830844_73831060_73844812_73845037_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_116521.known	chr2	+	6053	10	FSM	ENSG00000124356.17	ENST00000683149.1	6053	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	125.820860308968	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	73823204	True	NA	-1	True	AATAAA	-16	NA	73828942	73867152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73828997_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847573_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_116522.known	chr2	+	6207	10	FSM	ENSG00000124356.17	ENST00000683434.1	6207	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	130.158023614033	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	73823228	True	NA	-1	True	AATAAA	-16	NA	73828966	73867152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73828997_73830844_73831060_73844812_73844889_73845166_73845263_73847389_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_116523.known	chr2	+	7979	10	FSM	ENSG00000124356.17	ENST00000683027.1	7979	10	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	61.605274746106	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	73823248	True	NA	-1	True	AATAAA	-16	NA	73828986	73867152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73829071_73829404_73829511_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_116524.known	chr2	+	6261	10	FSM	ENSG00000124356.17	ENST00000682351.1	6261	10	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	96.1500884355955	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	73823251	True	NA	-1	True	AATAAA	-16	NA	73828989	73867152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73829071_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_116525.known	chr2	+	6019	9	FSM	ENSG00000124356.17	ENST00000682851.1	6019	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	111.396182048578	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	73823204	True	NA	-1	True	AATAAA	-16	NA	73828942	73867152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73828997_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_116528.nic	chr2	+	580	5	ISM	ENSG00000124356.17	ENST00000536064.2	1997	13	7	17541	0	-360	5prime_fragment	FALSE	canonical	3	171	junction_1	72.9121903387904	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTCAGTATATAACAGCTAA	73823244	True	NA	NA	False	AATATA	-20	NA	73828982	73845261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_73829071_73829404_73829511_73830844_73831060_73844812_73844889_73845166
transcript_116530.nic	chr2	+	425	4	ISM	ENSG00000124356.17	ENST00000683349.1	1969	11	40	17545	-3	-360	5prime_fragment	FALSE	canonical	3	63	junction_1	131.175031499477	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTCAGTATATAACAGCTAA	73823219	True	NA	NA	False	AATATA	-20	NA	73828957	73845261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_73828997_73830844_73831060_73844812_73844889_73845166
transcript_116531.known	chr2	+	1778	11	FSM	ENSG00000124356.17	ENST00000684716.1	1778	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	150.45876511523	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACAAACCATTCCCTGT	73823244	True	NA	NA	False	NA	NA	NA	73828982	73873601	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73829071_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73870142_73870353_73873351
transcript_116533.known	chr2	+	1501	9	FSM	ENSG00000163017.14	ENST00000345517.8	1501	9	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	4.79420222769128	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTGCTCCTTCTACTGT	73892694	True	NA	NA	False	ATTAAA	-22	NA	73893007	73919865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73893052_73901275_73901438_73902359_73902489_73908672_73908784_73909054_73909140_73913484_73913647_73914679_73914872_73916583_73916766_73919431
transcript_116534.known	chr2	+	1075	7	FSM	ENSG00000114956.20	ENST00000264093.9	1075	7	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_1	649.605371659509	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTTTTCTAATTCAG	73906412	True	NA	15	True	AATAAA	-15	NA	73926879	73958946	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73927053_73938909_73939023_73946718_73946907_73950584_73950733_73957124_73957241_73958145_73958246_73958709
transcript_116538.known	chr2	+	1029	6	FSM	ENSG00000114956.20	ENST00000629438.2	1029	6	0	0	0	0	multi-exon	FALSE	canonical	3	633	junction_3	679.272728732723	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCAGTTGCTCATTTATT	73906358	True	NA	28	True	AATAAA	-28	NA	73926825	73958959	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73927053_73946718_73946907_73950584_73950733_73957124_73957241_73958145_73958246_73958709
transcript_11654.nic	chr1	-	2851	20	NIC	ENSG00000134243.12	novel	6990	20	NA	NA	-93	-3	combination_of_known_junctions	FALSE	canonical	3	168	junction_13	78.2868509069738	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTCTCGTCCTGTCTCT	NA	False	NA	-3	True	AAAAAG	-27	NA	109398011	109313803	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_109314058_109314260_109314385_109314671_109314779_109316849_109316959_109317852_109317970_109322931_109323122_109324898_109325090_109326991_109327161_109327498_109327602_109336239_109336347_109340723_109340880_109342013_109342159_109345750_109345879_109347482_109347533_109350928_109351003_109354366_109354532_109355366_109355470_109367407_109367482_109369529_109369590_109397586
transcript_116542.known	chr2	+	880	5	FSM	ENSG00000114956.20	ENST00000348222.3	880	5	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_1	764.465622183235	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTTGCTCATTTATTTC	73906358	True	NA	30	True	AATAAA	-30	NA	73926825	73958961	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73927053_73938909_73939023_73946718_73946907_73958145_73958246_73958709
transcript_116545.known	chr2	+	703	4	FSM	ENSG00000114956.20	ENST00000418996.5	703	4	0	0	0	0	multi-exon	FALSE	canonical	3	1177	junction_2	455.63460018845	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTTTTCTAATTCAG	73906407	True	NA	15	True	AATAAA	-15	NA	73926874	73958946	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_73927053_73946718_73946907_73958145_73958246_73958709
transcript_116547.nnic	chr2	+	664	4	NIC	ENSG00000114956.20	novel	1075	7	NA	NA	16	0	combination_of_known_splicesites	FALSE	canonical	3	75	junction_1	933.567470631996	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTTTTCTAATTCAG	73906374	True	NA	15	True	AATAAA	-15	NA	73926841	73958946	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_73927053_73957124_73957241_73958145_73958246_73958709
transcript_116548.nnic	chr2	+	569	3	NIC	ENSG00000114956.20	novel	703	4	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	302	junction_1	995.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTTTTCTAATTCAG	73906353	True	NA	15	True	AATAAA	-15	NA	73926820	73958946	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_73927053_73958145_73958246_73958709
transcript_116549.known	chr2	-	563	2	FSM	ENSG00000237883.3	ENST00000413452.2	745	2	179	3	8	-3	multi-exon	TRUE	canonical	3	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTTGAGGTTTCTCTTC	-73981290	True	NA	NA	False	AATAAA	-16	NA	73981433	73957969	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_73958208_73981108
transcript_116550.known	chr2	-	555	4	FSM	ENSG00000163170.12	ENST00000327428.10	555	4	0	0	0	0	multi-exon	TRUE	canonical	3	1556	junction_1	299.322568477554	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTAATGTTTCAGGTTCC	-74136256	True	NA	-3	True	ATTAAA	-33	NA	74147912	74135399	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74135659_74142271_74142361_74145188_74145304_74147820
transcript_116551.known	chr2	-	444	3	FSM	ENSG00000163170.12	ENST00000295326.4	444	3	0	0	0	0	multi-exon	FALSE	canonical	3	845	junction_1	709.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTGAAGGGTCATTAGT	-74136249	True	NA	-18	True	ATTAAA	-18	NA	74147905	74135414	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74135659_74145188_74145304_74147820
transcript_116553.known	chr2	+	3520	3	FSM	ENSG00000225439.4	ENST00000656407.1	3520	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCAGCACTTTGGGGCCG	74146537	True	NA	NA	False	NA	NA	NA	74148078	74151952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74148224_74148349_74148479_74148706
transcript_116556.known	chr2	+	1804	2	FSM	ENSG00000225439.4	ENST00000423477.2	1804	2	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTACTTTTGCTTATCTCTA	74146497	True	NA	50	True	NA	NA	NA	74148038	74150061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74148479_74148697
transcript_116566.known	chr2	-	4896	6	FSM	ENSG00000114978.18	ENST00000396049.5	4896	6	0	0	0	0	multi-exon	FALSE	canonical	3	823	junction_2	39.7290825466685	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTGTGGATTTTTGAGT	-74168504	True	NA	NA	False	AATATA	-20	NA	74178879	74152527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74156646_74159090_74159255_74165217_74165352_74167013_74167108_74172585_74172753_74178660
transcript_11657.nic	chr1	-	2651	20	NIC	ENSG00000134243.12	novel	6990	20	NA	NA	-33	-143	combination_of_known_junctions	FALSE	canonical	3	168	junction_13	78.2868509069738	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCAGCTCTGTTTCTGCT	-109392278	True	NA	-7	True	AATAAA	-16	NA	109397951	109313943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_109314058_109314260_109314385_109314671_109314779_109316849_109316959_109317852_109317970_109322931_109323122_109324898_109325090_109326991_109327161_109327498_109327602_109336239_109336347_109340723_109340880_109342013_109342159_109345750_109345879_109347482_109347533_109350928_109351003_109354366_109354532_109355366_109355470_109367407_109367482_109369529_109369590_109397586
transcript_116576.known	chr2	-	493	2	FSM	ENSG00000114978.18	ENST00000494600.1	493	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGCAGAAACACAGTATT	-74168504	True	NA	NA	False	TATAAA	-33	NA	74178879	74178007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74178282_74178660
transcript_116577.known	chr2	+	2320	10	FSM	ENSG00000065911.13	ENST00000678228.1	2320	10	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_4	536.79124387994	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGTATGAATTTCTGAAAT	74181815	True	NA	24	True	AATAAA	-16	NA	74198616	74215279	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74198743_74201381_74201480_74205704_74205890_74205981_74206089_74207703_74207827_74208568_74208722_74209941_74210050_74211198_74211292_74211740_74211867_74214078
transcript_116581.known	chr2	+	2463	9	FSM	ENSG00000065911.13	ENST00000489041.2	2463	9	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	442.59234559016	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTGGGATTACAGGCCT	74181811	True	NA	NA	False	NA	NA	NA	74198612	74215525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74198743_74201381_74201480_74205704_74205890_74207703_74207827_74208568_74208722_74209941_74210050_74211198_74211292_74211740_74211867_74214078
transcript_116584.known	chr2	+	4403	8	FSM	ENSG00000065911.13	ENST00000394053.7	4403	8	0	0	0	0	multi-exon	FALSE	canonical	3	852	junction_1	120.173514009484	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAATGTATCATGAAATG	74181813	True	NA	23	True	AATAAA	-27	NA	74198614	74217565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74198743_74205704_74205890_74207703_74207827_74208568_74208722_74209941_74210050_74211198_74211292_74211740_74211867_74214078
transcript_116588.known	chr2	+	2276	8	FSM	ENSG00000065911.13	ENST00000679055.1	2276	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	499.239258006313	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTGGGATTACAGGCCT	74181813	True	NA	NA	False	NA	NA	NA	74198614	74215525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74198743_74201381_74201480_74207703_74207827_74208568_74208722_74209941_74210050_74211198_74211292_74211740_74211867_74214078
transcript_116591.known	chr2	+	1396	7	FSM	ENSG00000065911.13	ENST00000470592.5	1396	7	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	377.967995411722	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAACCAGATTTATCTAAG	74181811	True	NA	81	True	NA	NA	NA	74198612	74214741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74198743_74207703_74207827_74208568_74208722_74209941_74210050_74211198_74211292_74211740_74211867_74214078
transcript_116593.known	chr2	+	4033	6	FSM	ENSG00000065911.13	ENST00000677377.1	4033	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	465.960341660103	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCACATGAATGGGAGTT	74181813	True	NA	-39	True	NA	NA	NA	74198614	74217503	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74198743_74208568_74208722_74209941_74210050_74211198_74211292_74211740_74211867_74214078
transcript_116594.known	chr2	-	4202	31	FSM	ENSG00000204843.13	ENST00000409868.5	4202	31	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_26	324.230843690109	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTTCCTGTGTGGTGTTG	-74370180	True	NA	-6	True	ATTAAA	-16	NA	74391865	74361157	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74361637_74362051_74362142_74362649_74362730_74362993_74363178_74363293_74363428_74365074_74365242_74365514_74365658_74365892_74366019_74366243_74366376_74366458_74366621_74366782_74366933_74367044_74367108_74367351_74367421_74367695_74367865_74367970_74368132_74368727_74368881_74369097_74369215_74369299_74369492_74369964_74370070_74370185_74370346_74370465_74370545_74370620_74370826_74370978_74371177_74371536_74371729_74372927_74372949_74374322_74374341_74376741_74376763_74377431_74377467_74377647_74377727_74377999_74378246_74391793
transcript_116618.known	chr2	-	4024	28	FSM	ENSG00000204843.13	ENST00000409567.7	4024	28	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_27	205.726415476213	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTCCTTTCCCCTGCTGT	-74380253	True	NA	NA	False	NA	NA	NA	74380299	74361498	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74361637_74362051_74362142_74362649_74362730_74362993_74363178_74363293_74363428_74365074_74365242_74365514_74365658_74365892_74366019_74366243_74366376_74366458_74366621_74366782_74366933_74367044_74367108_74367351_74367421_74367695_74367865_74367970_74368132_74368727_74368881_74369097_74369215_74369299_74369492_74369964_74370070_74370185_74370346_74370465_74370545_74370620_74370826_74370978_74371177_74371536_74371729_74377431_74377467_74377647_74377727_74377999_74378246_74380004
transcript_11662.known	chr1	-	3815	9	FSM	ENSG00000143106.13	ENST00000271308.9	3815	9	0	0	0	0	multi-exon	FALSE	canonical	3	2112	junction_8	152.036128518849	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGTAATGACTTGCA	-109403673	True	NA	-11	True	ATTAAA	-17	NA	109426448	109399041	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_109402091_109409927_109410015_109411010_109411114_109411876_109411936_109412076_109412185_109413067_109413136_109415236_109415364_109421859_109421927_109426301
transcript_116624.known	chr2	-	4365	28	FSM	ENSG00000204843.13	ENST00000409240.5	4365	28	0	0	0	0	multi-exon	FALSE	canonical	3	767	junction_18	107.955231284043	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCCTGTGTGGTGTTGA	-74392075	False	NA	-5	True	ATTAAA	-17	NA	74392087	74361156	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74361637_74362051_74362142_74362649_74362730_74362993_74363178_74363293_74363428_74365074_74365242_74365514_74365658_74365892_74366019_74366243_74366376_74366458_74366621_74366782_74366933_74367044_74367108_74367351_74367421_74367695_74367865_74367970_74368132_74368727_74368881_74369097_74369215_74369299_74369492_74369964_74370070_74370185_74370346_74370465_74370545_74370620_74370826_74370978_74371177_74371536_74371729_74377431_74377467_74377647_74377727_74377999_74378246_74391793
transcript_11663.nnic	chr1	-	931	9	NNC	ENSG00000143106.13	novel	1667	9	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	3	127	junction_8	739.636354906923	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTAATAGACTGTTCTC	-109403715	False	NA	-13	True	AATAAA	-16	NA	109426490	109401849	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_109402091_109409927_109410015_109411010_109411114_109411876_109411936_109412076_109412185_109413067_109413136_109415236_109415364_109421859_109421927_109426419
transcript_116648.known	chr2	-	4229	27	FSM	ENSG00000204843.13	ENST00000434055.5	4229	27	0	0	0	0	multi-exon	TRUE	canonical	3	767	junction_17	106.069622385014	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTGTGTGGTGTTGAG	-74370182	True	NA	-4	True	ATTAAA	-18	NA	74391867	74361155	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74361637_74362051_74362142_74362649_74362730_74362993_74363178_74363293_74363428_74365074_74365242_74365514_74365658_74365892_74366019_74366243_74366621_74366782_74366933_74367044_74367108_74367351_74367421_74367695_74367865_74367970_74368132_74368727_74368881_74369097_74369215_74369299_74369492_74369964_74370070_74370185_74370346_74370465_74370545_74370620_74370826_74370978_74371177_74371536_74371729_74377431_74377467_74377647_74377727_74377999_74378246_74391793
transcript_116656.known	chr2	-	4145	26	FSM	ENSG00000204843.13	ENST00000409438.5	4145	26	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_25	261.715980406241	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCCTGTGTGGTGTTGA	-74374689	False	NA	-5	True	ATTAAA	-17	NA	74374735	74361156	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74361637_74362051_74362142_74362649_74362730_74362993_74363178_74363293_74363428_74365074_74365242_74365514_74365658_74365892_74366019_74366243_74366376_74366458_74366621_74366782_74366933_74367044_74367108_74367351_74367421_74367695_74367865_74367970_74368132_74368727_74368881_74369097_74369215_74369299_74369492_74369964_74370070_74370185_74370346_74370465_74370545_74370620_74370826_74370978_74371177_74371536_74371729_74372927_74372949_74374322
transcript_116707.known	chr2	-	883	2	FSM	ENSG00000284308.2	ENST00000640331.1	883	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCGAGCTTCCAACTGTCG	-74421431	True	NA	NA	False	NA	NA	NA	74421591	74415407	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74416242_74421542
transcript_116709.known	chr2	+	1147	10	FSM	ENSG00000005448.17	ENST00000348227.4	1147	10	0	0	0	0	multi-exon	FALSE	canonical	3	494	junction_1	81.5381452806137	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTCTGATTACTCAG	74412724	True	NA	28	True	CATAAA	-17	NA	74421729	74425755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74421817_74422152_74422376_74422869_74422933_74423318_74423386_74423477_74423532_74423854_74423983_74424874_74424976_74425074_74425238_74425416_74425492_74425569
transcript_116712.nnic	chr2	+	1130	10	NNC	ENSG00000005448.17	novel	1147	10	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	227.791815285605	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTCTGATTACTCAG	74412719	True	NA	28	True	CATAAA	-17	NA	74421724	74425755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_74421795_74422152_74422376_74422869_74422933_74423318_74423386_74423477_74423532_74423854_74423983_74424874_74424976_74425074_74425238_74425416_74425492_74425569
transcript_116713.known	chr2	+	1046	10	FSM	ENSG00000005448.17	ENST00000480089.5	1046	10	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	217.941265165017	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGACTGGCTATGACCT	74412753	True	NA	-77	True	NA	NA	NA	74421758	74425650	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74421817_74422119_74422376_74422869_74422933_74423318_74423386_74423477_74423532_74423854_74423983_74424874_74424976_74425074_74425238_74425416_74425492_74425569
transcript_116717.nnic	chr2	+	1113	9	NIC	ENSG00000005448.17	novel	1147	10	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	3	63	junction_4	221.310726129576	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTCTGATTACTCAG	74412704	True	NA	28	True	CATAAA	-17	NA	74421709	74425755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_74421817_74422152_74422376_74422869_74422933_74423318_74423386_74423854_74423983_74424874_74424976_74425074_74425238_74425416_74425492_74425569
transcript_116721.nic	chr2	+	924	9	NIC	ENSG00000005448.17	novel	1147	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_1	221.985782202374	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTCTGATTACTCAG	74412724	True	NA	28	True	CATAAA	-17	NA	74421729	74425755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_74421817_74422869_74422933_74423318_74423386_74423477_74423532_74423854_74423983_74424874_74424976_74425074_74425238_74425416_74425492_74425569
transcript_116725.known	chr2	+	2356	6	FSM	ENSG00000005448.17	ENST00000468778.5	2356	6	0	0	0	0	multi-exon	FALSE	canonical	3	635	junction_3	51.6162765026692	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTCTGATTACTCAG	74412760	True	NA	28	True	CATAAA	-17	NA	74421765	74425755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74422933_74423318_74423983_74424874_74424976_74425074_74425238_74425416_74425492_74425569
transcript_116726.known	chr2	-	2646	13	FSM	ENSG00000114993.17	ENST00000305557.9	2646	13	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_12	151.733227152863	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCTGCCTCACATCATCC	-74440167	False	5307	20	True	NA	NA	NA	74440583	74425835	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74426575_74427168_74427274_74427423_74427593_74428267_74428397_74428630_74428738_74428847_74428943_74429827_74430038_74430251_74430370_74430464_74430519_74430615_74430678_74432466_74432667_74439550_74439978_74440352
transcript_116731.known	chr2	-	2220	12	FSM	ENSG00000114993.17	ENST00000233330.6	2220	12	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_11	108.725752497733	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCACCTGGCTCCTGAG	-74440215	False	NA	-27	True	ATTAAA	-15	NA	74440631	74425882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74426575_74427168_74427274_74427423_74427593_74428267_74428397_74428630_74428738_74428847_74428943_74429827_74430038_74430251_74430370_74430464_74430519_74430615_74430678_74432466_74432667_74440352
transcript_116732.known	chr2	-	2221	12	FSM	ENSG00000114993.17	ENST00000272430.10	2221	12	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_4	27.7795334615044	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGCCTCACATCATCCC	-74436630	True	NA	21	True	NA	NA	NA	74441937	74425834	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74426575_74427168_74427274_74427423_74427593_74428267_74428397_74428630_74428738_74428847_74428943_74429827_74430038_74430251_74430370_74430464_74430519_74430615_74430678_74432466_74432667_74441705
transcript_116790.known	chr2	-	820	2	FSM	ENSG00000114993.17	ENST00000484453.1	820	2	0	0	0	0	multi-exon	FALSE	canonical	3	435	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCCTGCTAGTGTGCAAC	-74442003	True	NA	NA	False	NA	NA	NA	74442419	74432560	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74432667_74441705
transcript_116792.known	chr2	+	1181	5	FSM	ENSG00000115274.15	ENST00000233331.12	1181	5	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	6.37867541108654	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGGCTTGTACAGAACTGG	74454101	True	NA	4	True	ATTAAA	-14	NA	74455086	74457944	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74455175_74455405_74455599_74455817_74455937_74456102_74456273_74457333
transcript_116793.known	chr2	+	1325	5	FSM	ENSG00000239779.7	ENST00000393972.7	1325	5	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_1	284.913144659912	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGGGTGGACTAAAGCT	74458337	False	NA	24	True	ATTAAA	-24	NA	74458399	74460891	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74458672_74458996_74459099_74459642_74459746_74459872_74460050_74460220
transcript_116795.known	chr2	+	597	5	FSM	ENSG00000239779.7	ENST00000464774.6	597	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	295.323974644796	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTTCAAGCCCCCAGCCT	74451500	True	NA	66	True	NA	NA	NA	74458449	74460230	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74458672_74459477_74459563_74459642_74459746_74459872_74460050_74460220
transcript_116797.known	chr2	+	1175	4	FSM	ENSG00000239779.7	ENST00000233615.7	1175	4	0	0	0	0	multi-exon	FALSE	canonical	3	464	junction_1	64.9153294684699	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACTTGTGGATTTGGGTG	74451488	True	NA	14	True	ATTAAA	-14	NA	74458437	74460881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74458672_74459642_74459746_74459872_74460050_74460220
transcript_116798.known	chr2	+	765	4	FSM	ENSG00000239779.7	ENST00000470536.5	765	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	256.70259488798	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGAGTCTGTACCGCAGA	74451500	True	NA	NA	False	NA	NA	NA	74458449	74460617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74458538_74459642_74459746_74459872_74460050_74460220
transcript_1168.known	chr1	+	1309	7	FSM	ENSG00000189409.14	ENST00000378675.7	1309	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	21.2733531808118	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCCTCGCTCATTCTTG	1631017	True	NA	NA	False	GATAAA	-16	NA	1632178	1634654	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1632375_1632782_1632914_1632980_1633356_1633747_1633913_1633988_1634100_1634201_1634329_1634450
transcript_116801.nic	chr2	+	2981	13	NIC	ENSG00000115282.21	novel	2916	13	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_8	43.7518253587461	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCCTACATAGTCATGCT	74479993	True	NA	29	True	AATAAA	-18	NA	74483069	74494559	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_74483136_74483321_74483411_74490024_74490128_74490243_74490474_74490655_74490740_74491127_74491185_74491294_74491376_74491480_74491667_74491943_74492056_74492138_74492230_74492303_74492446_74492645_74492748_74492921
transcript_116803.nic	chr2	+	3583	13	NIC	ENSG00000115282.21	novel	2916	13	NA	NA	-665	0	combination_of_known_junctions	TRUE	canonical	3	89	junction_8	25.6616607672484	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCCTACATAGTCATGCT	74482392	False	NA	29	True	AATAAA	-18	NA	74482407	74494559	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_74483136_74483321_74483411_74490024_74490128_74490243_74490474_74490655_74490740_74491127_74491185_74491294_74491376_74491480_74491667_74492003_74492056_74492138_74492230_74492303_74492446_74492645_74492748_74492921
transcript_116806.nnic	chr2	+	3490	13	NIC	ENSG00000115282.21	novel	2916	13	NA	NA	-506	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_8	46.626396315106	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCCTACATAGTCATGCT	74482551	False	NA	29	True	AATAAA	-18	NA	74482566	74494559	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_74483136_74483321_74483411_74490024_74490128_74490243_74490474_74490655_74490740_74491127_74491185_74491294_74491376_74491480_74491673_74491943_74492056_74492138_74492230_74492303_74492446_74492645_74492748_74492921
transcript_116809.known	chr2	+	2916	13	FSM	ENSG00000115282.21	ENST00000233623.11	2916	13	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_8	27.0373969407806	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCCTACATAGTCATGCT	74480004	True	NA	29	True	AATAAA	-18	NA	74483080	74494559	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74483136_74483321_74483411_74490024_74490128_74490243_74490474_74490655_74490740_74491127_74491185_74491294_74491376_74491480_74491673_74492003_74492056_74492138_74492230_74492303_74492446_74492645_74492748_74492921
transcript_116836.known	chr2	+	2806	12	FSM	ENSG00000115282.21	ENST00000424122.5	2806	12	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	45.9334768716746	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCCTACATAGTCATGCT	74480005	True	NA	29	True	AATAAA	-18	NA	74483081	74494559	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74483136_74483321_74483411_74490243_74490474_74490655_74490740_74491127_74491185_74491294_74491376_74491480_74491667_74492003_74492056_74492138_74492230_74492303_74492446_74492645_74492748_74492921
transcript_11684.known	chr1	+	2866	12	FSM	ENSG00000162650.17	ENST00000604728.6	2866	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	30.4416526305001	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAACATAGAAAAGGAAGGA	109482617	True	NA	64	True	TATAAA	-5	NA	109483953	109492777	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109484081_109486056_109486123_109486505_109486611_109487006_109487218_109487517_109487805_109488382_109488466_109488846_109489101_109489282_109489707_109489929_109490129_109490270_109490393_109490921_109491718_109492585
transcript_11685.known	chr1	+	2526	12	FSM	ENSG00000162650.17	ENST00000459635.2	2526	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_11	26.4372014372685	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGTCTCCCTGTTCTGTT	109482568	True	NA	21	True	AAAAAG	-19	NA	109483904	109492734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109484081_109486056_109486123_109486505_109486611_109487006_109487218_109487517_109487805_109488382_109488466_109488846_109489101_109489929_109490129_109490270_109490393_109490921_109491718_109492026_109492105_109492585
transcript_116866.known	chr2	+	3358	10	FSM	ENSG00000115282.21	ENST00000410003.5	3358	10	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_8	29.3160723625357	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCCTACATAGTCATGCT	74480010	True	NA	29	True	AATAAA	-18	NA	74483086	74494559	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74483136_74483321_74483411_74490024_74490128_74490243_74490474_74490655_74490740_74491127_74491185_74491294_74491376_74491480_74491673_74492003_74492056_74492138
transcript_116879.known	chr2	+	958	9	FSM	ENSG00000115282.21	ENST00000442235.6	958	9	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_8	56.427913083863	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCACCGAAGCCACCCCAA	74480010	True	NA	NA	False	NA	NA	NA	74483086	74493083	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74483136_74483321_74483411_74490024_74490128_74490243_74490474_74490655_74490740_74491127_74491185_74491294_74491376_74491480_74491629_74492966
transcript_116890.known	chr2	-	4128	9	FSM	ENSG00000135637.14	ENST00000393965.8	4128	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	5.38371386683951	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTTCTTTCCTGCCTTC	-74482507	True	NA	NA	False	NA	NA	NA	74482998	74472831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74474803_74474915_74475116_74475224_74475403_74475611_74475727_74480768_74480883_74480955_74481087_74481222_74481373_74481451_74481539_74481816
transcript_116893.known	chr2	-	2835	9	FSM	ENSG00000135637.14	ENST00000290418.4	2835	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	8	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-74482505	True	NA	NA	False	NA	NA	NA	74482996	74474101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74474803_74474915_74475116_74475224_74475403_74475611_74475727_74480768_74480883_74480955_74481066_74481222_74481373_74481451_74481539_74481816
transcript_11690.known	chr1	+	2448	11	FSM	ENSG00000162650.17	ENST00000683729.1	2448	11	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_10	10.4804580052591	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGTCTCCCTGTTCTGTT	109482568	True	NA	21	True	AAAAAG	-19	NA	109483904	109492734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109484081_109486056_109486123_109486505_109486611_109487006_109487218_109487517_109487805_109488382_109488466_109488846_109489101_109489929_109490129_109490270_109490393_109490921_109491718_109492585
transcript_116941.known	chr2	-	2469	5	FSM	ENSG00000115275.15	ENST00000647771.1	2469	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	113.610078778249	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTGGGGTGAATGTGAA	-74457153	False	8184	-69	True	NA	NA	NA	74465337	74461125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74463013_74463379_74463387_74464495_74464723_74464895_74464988_74465081
transcript_116943.known	chr2	-	2433	5	FSM	ENSG00000115275.15	ENST00000452063.7	2433	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	87.0545805802314	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCAAACCTTCCTCATTT	-74457212	False	8184	-122	True	NA	NA	NA	74465396	74461178	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74463013_74463189_74463387_74464495_74464723_74464895_74464988_74465313
transcript_116945.known	chr2	-	2649	5	FSM	ENSG00000115275.15	ENST00000649075.1	2649	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	92.2252676873318	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGAGTCTATTTTTCTAA	-74457216	False	8184	-49	True	NA	NA	NA	74465400	74461105	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74462774_74462960_74463013_74463189_74463387_74464495_74464723_74464895
transcript_116949.known	chr2	-	2668	4	FSM	ENSG00000115275.15	ENST00000409065.5	2668	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	107.632089390974	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAACTCTATTGCTTTT	-74457201	False	8184	-12	True	AATAAA	-13	NA	74465385	74461068	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74463013_74463379_74463387_74464495_74464723_74464895
transcript_116950.known	chr2	-	2606	4	FSM	ENSG00000115275.15	ENST00000647723.1	2606	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	104.91372116596	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTGGGGTGAATGTGAA	-74457061	False	NA	-69	True	NA	NA	NA	74465245	74461125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74463013_74463189_74463332_74464495_74464723_74464895
transcript_116951.known	chr2	-	1332	4	FSM	ENSG00000115275.15	ENST00000650523.1	1332	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	104.91372116596	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAACGAGCAGTCCACGCC	-74457110	False	8184	NA	False	NA	NA	NA	74465294	74462278	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74463013_74463189_74463332_74464665_74464723_74464895
transcript_116952.known	chr2	-	2867	4	FSM	ENSG00000115275.15	ENST00000448666.7	2867	4	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	10.2306728354819	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTTTGCCAGATTTGCC	-74457198	False	8184	0	True	AATAAA	-25	NA	74465382	74461056	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74463013_74463189_74463387_74464495_74464723_74464895
transcript_116955.known	chr2	-	2269	4	FSM	ENSG00000115275.15	ENST00000647915.1	2269	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	87.4693597146389	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGTGAATGTGAATCCAGA	-74457216	False	8184	-63	True	NA	NA	NA	74465400	74461119	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74463013_74463189_74463387_74464895_74464988_74465313
transcript_116957.known	chr2	-	2304	3	FSM	ENSG00000115275.15	ENST00000649854.1	2304	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	104.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGAATGTGAATCCAGAGT	-74456978	False	NA	-61	True	NA	NA	NA	74465162	74461117	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74463013_74463189_74463332_74464895
transcript_116958.known	chr2	-	2445	3	FSM	ENSG00000115275.15	ENST00000647753.1	2445	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	91.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCCAAGACACTCATGCCA	-74457204	False	8184	NA	False	NA	NA	NA	74465388	74461257	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74463013_74463189_74463387_74464895
transcript_116959.known	chr2	-	2205	3	FSM	ENSG00000115275.15	ENST00000462443.2	2205	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	103.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTCTATTTTTCTAAATAA	-74457226	False	8184	-45	True	NA	NA	NA	74465410	74461101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74463013_74463189_74463387_74465313
transcript_116960.known	chr2	-	811	2	FSM	ENSG00000115275.15	ENST00000486036.1	811	2	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTCTGGCTGCCTGGCTT	-74457216	False	8184	NA	False	NA	NA	NA	74465400	74464416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74464723_74464895
transcript_116961.known	chr2	-	386	2	FSM	ENSG00000204822.7	ENST00000409710.1	386	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATGTTTCTGGAACAAGA	-74464503	True	NA	-6	True	AATAAA	-19	NA	74472687	74471985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74472253_74472568
transcript_116962.known	chr2	-	496	3	FSM	ENSG00000204822.7	ENST00000258105.8	496	3	0	0	0	0	multi-exon	FALSE	canonical	3	662	junction_2	7.5	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTCTGGAACAAGACTAG	-74464496	True	NA	-2	True	AATAAA	-23	NA	74472680	74471981	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74472253_74472357_74472471_74472568
transcript_116963.known	chr2	-	1073	2	FSM	ENSG00000179528.16	ENST00000377566.9	1073	2	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCCTCTATCCAGACGC	-74498843	False	121	0	True	AATAAA	-18	NA	74499603	74497516	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74498319_74499332
transcript_116964.known	chr2	+	2083	1	FSM	ENSG00000257702.4	ENST00000603175.1	2083	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTGGATTTTTCTTTA	74502571	False	NA	11	True	TATAAA	-12	NA	74502594	74504677	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74502600_74504700
transcript_116966.nic	chr2	-	872	9	NIC	ENSG00000115289.14	novel	907	9	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	39.0830445973698	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTTCTGCCTTATTCT	-74507425	False	NA	-4	True	AATAAA	-16	NA	74507442	74505042	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_74505191_74505338_74505420_74505551_74505639_74505736_74505771_74505951_74506058_74506180_74506253_74506731_74506885_74507041_74507148_74507357
transcript_116967.known	chr2	-	907	9	FSM	ENSG00000115289.14	ENST00000233630.11	907	9	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_8	11.0113577727726	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTTCTGCCTTATTCT	-74506935	True	NA	-4	True	AATAAA	-16	NA	74507695	74505042	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74505191_74505338_74505420_74505551_74505639_74505736_74505771_74505951_74506058_74506180_74506253_74506731_74506885_74507041_74507148_74507575
transcript_116969.known	chr2	-	1056	8	FSM	ENSG00000115289.14	ENST00000475863.5	1056	8	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_2	7.71693076346829	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTTCTGCCTTATTCT	-74507399	False	NA	-4	True	AATAAA	-16	NA	74507416	74505042	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74505191_74505338_74505420_74505551_74505639_74505736_74505771_74505951_74506058_74506180_74506253_74506731_74506885_74507041
transcript_116976.known	chr2	-	2584	12	FSM	ENSG00000144045.14	ENST00000404568.4	2584	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	2.13588002263104	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTAGTTTGGTCCTGCAG	-74511902	False	NA	-5	True	TATAAA	-21	NA	74526231	74518130	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74518603_74519039_74519231_74519555_74519747_74519914_74520035_74522579_74522772_74522855_74523015_74523118_74523219_74523309_74523538_74523922_74524308_74525008_74525203_74525492_74525749_74526135
transcript_116984.known	chr2	-	3689	14	FSM	ENSG00000115318.12	ENST00000264094.8	3689	14	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_13	63.9682798612122	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTTGGCTGAGTATTCA	-74553805	True	NA	NA	False	AATAAA	-19	NA	74553942	74532257	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74533680_74533881_74533994_74534099_74534237_74534315_74534432_74534530_74534775_74535291_74535455_74535587_74535756_74535995_74536151_74536290_74536472_74536708_74536929_74549368_74549584_74550184_74550349_74552321_74552647_74553875
transcript_116990.known	chr2	-	1458	12	FSM	ENSG00000115307.17	ENST00000377526.4	1458	12	0	0	0	0	multi-exon	FALSE	canonical	3	840	junction_9	85.6846997345211	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCATCTGTTGTCTCTCTCG	-74515377	True	NA	-25	True	ATTAAA	-19	NA	74529706	74526651	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74526837_74526940_74527060_74527247_74527364_74527470_74527591_74527735_74527839_74527939_74528007_74528247_74528322_74528416_74528490_74528750_74528936_74529131_74529283_74529361_74529500_74529579
transcript_116995.known	chr2	-	1581	12	FSM	ENSG00000115307.17	ENST00000425118.5	1581	12	0	0	0	0	multi-exon	TRUE	canonical	3	108	junction_2	269.74815312751	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCTCTCGGTCTCAA	-74515431	True	NA	-18	True	ATTAAA	-26	NA	74529760	74526644	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74526837_74526940_74527122_74527247_74527364_74527470_74527591_74527735_74527839_74527939_74528007_74528247_74528322_74528416_74528490_74528750_74528936_74529131_74529283_74529361_74529500_74529579
transcript_116996.known	chr2	-	2398	12	FSM	ENSG00000115318.12	ENST00000393937.6	2398	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	77.9628010470855	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGAGCCCAGGAGTCAGT	-74553821	True	NA	-13	True	TATAAA	-18	NA	74553958	74533129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74533680_74533881_74533994_74534099_74534237_74534315_74534432_74534530_74534775_74535291_74535455_74535587_74535756_74535995_74536151_74536290_74536472_74550184_74550349_74552321_74552647_74553875
transcript_117.known	SIRV3	-	589	3	FSM	SIRV3C	SIRV310	589	3	0	0	0	0	multi-exon	FALSE	canonical	3	1420	junction_2	31.5	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTTGGTTTTGGGTACT	NA	False	NA	NA	False	NA	NA	NA	9914	8759	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV3_-_8967_9189_9325_9667
transcript_117000.known	chr2	-	1645	11	FSM	ENSG00000115307.17	ENST00000463900.5	1645	11	0	0	0	0	multi-exon	FALSE	canonical	3	877	junction_2	73.6266935289097	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCATCTGTTGTCTCTCTCG	-74515368	True	NA	-25	True	ATTAAA	-19	NA	74529697	74526651	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74526837_74526940_74527060_74527247_74527364_74527470_74527591_74527735_74527839_74527939_74528007_74528247_74528322_74528416_74528490_74528750_74529283_74529361_74529500_74529579
transcript_117008.known	chr2	-	1658	11	FSM	ENSG00000115307.17	ENST00000466894.5	1658	11	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_2	281.491030052469	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCCAATGTCACATTAAAT	-74515356	True	NA	-62	True	AAAAAG	-15	NA	74529685	74526688	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74526837_74526940_74527122_74527247_74527364_74527470_74527591_74527735_74527839_74527939_74528007_74528247_74528322_74528416_74528490_74528750_74529283_74529361_74529500_74529579
transcript_11703.nnic	chr1	+	2400	10	NIC	ENSG00000162650.17	novel	2448	11	NA	NA	-57	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_2	25.1238905534794	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGTCTCCCTGTTCTGTT	109483835	False	NA	21	True	AAAAAG	-19	NA	109483847	109492734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_109484081_109486056_109486123_109487006_109487218_109487517_109487805_109488382_109488466_109488846_109489101_109489929_109490129_109490270_109490393_109490921_109491718_109492585
transcript_117048.known	chr2	+	1785	8	FSM	ENSG00000115317.12	ENST00000258080.8	1785	8	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_5	8.54280936441489	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGTGGGCAGTTAGTC	74529208	True	NA	3	True	ATTAAA	-19	NA	74529932	74533319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74530513_74530616_74530822_74530910_74531106_74531338_74531372_74531596_74531703_74531855_74531926_74532618_74532715_74532819
transcript_117070.known	chr2	+	1479	7	FSM	ENSG00000115317.12	ENST00000437202.1	1479	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	78.487790982632	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTGGGAGGGCTGGATC	74529321	False	NA	NA	False	AATAAA	-32	NA	74530045	74533192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74530513_74530616_74530822_74530910_74531106_74531338_74531372_74531566_74531703_74531855_74531926_74532819
transcript_117074.known	chr2	+	1771	7	FSM	ENSG00000115317.12	ENST00000484352.5	1771	7	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_4	8.85845484394554	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTTTTGTGGGCAGTTA	74530038	False	NA	0	True	ATTAAA	-16	NA	74530168	74533316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74530513_74530616_74530822_74530910_74531106_74531338_74531703_74531855_74531926_74532618_74532715_74532819
transcript_1171.nic	chr1	-	858	7	ISM	ENSG00000248333.9	ENST00000407249.7	2677	20	8	6799	0	-614	5prime_fragment	FALSE	canonical	3	85	junction_3	10.2794292967395	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGCCAGGCCGGCGCCT	-1652993	True	NA	NA	False	NA	NA	NA	1659004	1642385	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_1642509_1645125_1645263_1649498_1649638_1652438_1652567_1655368_1655485_1657374_1657499_1658913
transcript_117101.known	chr2	+	1955	5	FSM	ENSG00000115325.14	ENST00000409429.5	1955	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	35.0927342907332	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGGGTTTAAGAAGTTTA	74549000	False	NA	9	True	ATTAAA	-5	NA	74549025	74557536	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74549173_74555153_74555454_74555574_74555669_74555893_74556079_74556307
transcript_117102.known	chr2	+	1918	5	FSM	ENSG00000115325.14	ENST00000233668.10	1918	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_4	8.74642784226795	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATGTGTGTGAAGAGAA	74553741	True	NA	24	True	ATTAAA	-20	NA	74554719	74557551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74554815_74555153_74555454_74555574_74555669_74555893_74556079_74556307
transcript_117108.known	chr2	+	1722	4	FSM	ENSG00000115325.14	ENST00000340004.6	1722	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	31.7525152109596	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATGTGTGTGAAGAGAA	74553752	True	NA	24	True	ATTAAA	-20	NA	74554730	74557551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74554815_74555153_74555454_74555574_74555669_74556307
transcript_117117.known	chr2	-	2544	11	FSM	ENSG00000159374.18	ENST00000421985.2	2544	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.2638350316493	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTGCTTCAGATTACAC	-74647994	True	NA	0	True	AATAAA	-17	NA	74648330	74557882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74558875_74559697_74559710_74560150_74560292_74562216_74562424_74575437_74575580_74576455_74576619_74581673_74581848_74607054_74607224_74614963_74615150_74640035_74640328_74648264
transcript_117125.known	chr2	-	2531	10	FSM	ENSG00000159374.18	ENST00000536235.5	2531	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	14.1978958621896	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACACCCTGTGCTTC	-74648002	True	NA	-9	True	AATAAA	-8	NA	74648338	74557891	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_74558875_74560150_74560292_74562216_74562424_74575437_74575580_74576455_74576619_74581673_74581848_74607054_74607224_74614963_74615150_74640035_74640328_74648264
transcript_117131.known	chr2	+	6075	14	FSM	ENSG00000135622.13	ENST00000357877.7	6075	14	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	5.03243914886035	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTGTACCTATGAGTTT	74653816	True	NA	NA	False	AATAAA	-13	NA	74654246	74683841	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74654522_74656533_74656686_74657564_74657625_74657852_74657952_74662731_74662826_74673456_74673577_74673676_74673829_74674497_74674677_74674887_74675036_74675161_74675385_74675524_74675635_74675748_74675910_74679275_74679335_74679598
transcript_117134.known	chr2	+	6007	13	FSM	ENSG00000135622.13	ENST00000611975.4	6007	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	7.59202798262025	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAGTTTGTGGAGAAAAAT	74653797	True	NA	NA	False	AATAAA	-25	NA	74654227	74683853	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74654522_74656533_74656686_74657564_74657625_74662731_74662826_74673456_74673577_74673676_74673829_74674497_74674677_74674887_74675036_74675161_74675385_74675524_74675635_74675748_74675910_74679275_74679335_74679598
transcript_117137.known	chr2	+	2672	12	FSM	ENSG00000135622.13	ENST00000446927.5	2672	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	7.13853470160021	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACATAGTGTTCATAAGA	74653931	True	NA	NA	False	NA	NA	NA	74654361	74680746	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74654522_74656533_74656686_74657564_74657625_74673456_74673577_74673676_74673829_74674497_74674677_74674887_74675036_74675161_74675385_74675524_74675635_74675748_74675910_74679275_74679335_74679598
transcript_117143.known	chr2	+	2177	10	FSM	ENSG00000135622.13	ENST00000339773.9	2177	10	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	8.01079518563375	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTCCCCCTAACATCTG	74653849	True	NA	NA	False	NA	NA	NA	74654279	74680441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74654522_74656533_74656686_74657564_74657625_74674497_74674677_74674887_74675036_74675161_74675385_74675524_74675635_74675748_74675910_74679275_74679335_74679598
transcript_117149.known	chr2	+	5626	18	FSM	ENSG00000159399.10	ENST00000290573.7	5626	18	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	43.9472001540949	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTCATGAGTGTTTTT	74828476	True	NA	4	True	AATAAA	-27	NA	74834126	74893359	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74834644_74854292_74854456_74867635_74867785_74872299_74872420_74873275_74873372_74873843_74873944_74874265_74874450_74877165_74877322_74878687_74878922_74880264_74880570_74881710_74881860_74882119_74882240_74885493_74885590_74886293_74886394_74886489_74886674_74887902_74888059_74889244_74889479_74890796
transcript_11715.known	chr1	+	5009	4	FSM	ENSG00000174151.15	ENST00000310611.8	5009	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	5.71547606649408	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATTATGTTCTTGTCCT	109493742	True	NA	9	True	ATTAAA	-18	NA	109494098	109500433	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109494288_109494519_109494624_109495142_109495181_109495755
transcript_117151.known	chr2	+	1097	4	FSM	ENSG00000115350.12	ENST00000483063.2	1097	4	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_1	17.9133717900592	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTAGGGTACATGTGCA	74955646	True	NA	NA	False	NA	NA	NA	74958642	74970128	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74958893_74959340_74959426_74960104_74960147_74969408
transcript_117154.known	chr2	+	528	4	FSM	ENSG00000115350.12	ENST00000465242.5	528	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	146.718172774276	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACCTCAGTCCAGTGTGT	74958852	True	NA	10	True	AATAAA	-10	NA	74959005	74969723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_74959092_74959340_74959426_74960104_74960147_74969408
transcript_117156.known	chr2	-	1828	4	FSM	ENSG00000115363.14	ENST00000393913.8	1828	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	2.35702260395516	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTGCATGTCCGTCTC	-75560798	True	NA	NA	False	AATAAA	-17	NA	75560939	75492317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_75493610_75518055_75518209_75522364_75522488_75560679
transcript_117161.known	chr2	-	4367	17	FSM	ENSG00000005436.14	ENST00000321027.8	4367	17	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_8	21.0586049810998	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACTTAAACTGCTATAGT	-75709037	True	NA	-3	True	ATTAAA	-21	NA	75710915	75662704	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_75664784_75665928_75666054_75670137_75670285_75671949_75672017_75673443_75673521_75680192_75680315_75687826_75687978_75689025_75689226_75689968_75690082_75690637_75690720_75691976_75692101_75694240_75694428_75696199_75696316_75701189_75701288_75702198_75702424_75706522_75706652_75710590
transcript_117163.known	chr2	-	2265	17	FSM	ENSG00000005436.14	ENST00000472230.5	2265	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	34.1530905446345	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATTTTAATATAGTTAC	-75710576	False	NA	-43	True	AATAAA	-17	NA	75710606	75664644	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_75664784_75665928_75666054_75670137_75670285_75671949_75672017_75673443_75673521_75680192_75680315_75687826_75687978_75689025_75689226_75689968_75690082_75690637_75690720_75691976_75692101_75694240_75694428_75696199_75696316_75701189_75701288_75702198_75702424_75706522_75706652_75710443
transcript_11717.known	chr1	+	4912	3	FSM	ENSG00000174151.15	ENST00000420578.7	4912	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	5.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTATGTTCTTGTCCTTC	109493737	True	NA	11	True	ATTAAA	-20	NA	109494093	109500435	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109494288_109495142_109495181_109495755
transcript_117174.known	chr2	+	7825	6	FSM	ENSG00000115364.14	ENST00000393909.7	7825	6	0	0	0	0	multi-exon	FALSE	canonical	3	580	junction_2	44.6434765671313	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCTGGATTTGATTTGC	75635521	True	NA	7	True	AATAAA	-20	NA	75646782	75662206	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_75646911_75647101_75647220_75652141_75652261_75652522_75652658_75654735_75654918_75655063
transcript_117177.known	chr2	+	693	6	FSM	ENSG00000115364.14	ENST00000358788.10	693	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	294.663876306547	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAAGTAAAATGCT	75635532	True	NA	NA	False	AATAAA	-30	NA	75646793	75690759	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_75646911_75647101_75647220_75652141_75652261_75652522_75652658_75679774_75679853_75690633
transcript_117182.nic	chr2	+	316	3	ISM	ENSG00000115364.14	ENST00000393909.7	7825	6	0	9995	0	-2919	5prime_fragment	FALSE	canonical	3	580	junction_2	11.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATATGTTAGAAAGGAGAAA	75635521	True	NA	28	True	AATAGA	-8	NA	75646782	75652211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_75646911_75647101_75647220_75652141
transcript_117183.known	chr2	-	1066	3	FSM	ENSG00000005436.14	ENST00000470503.1	1066	3	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	11.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTAAGCCTTAAAGGACTG	-75709021	True	NA	NA	False	AATAAA	-20	NA	75710899	75701795	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_75702424_75706522_75706652_75710590
transcript_117188.known	chr2	+	720	2	FSM	ENSG00000115364.14	ENST00000493686.1	720	2	0	0	0	0	multi-exon	FALSE	canonical	3	603	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAATAAAAACTTATATGAA	75635521	True	NA	NA	False	AGTAAA	-45	NA	75646782	75647693	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_75646911_75647101
transcript_117189.known	chr2	+	1747	1	FSM	ENSG00000270696.1	ENST00000604845.1	1747	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGGATTTGATTTGCTA	75660446	False	NA	9	True	AATAAA	-22	NA	75660461	75662208	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_75660500_75662200
transcript_117190.known	chr2	-	3616	3	FSM	ENSG00000176204.14	ENST00000409088.3	3616	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	9	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTCTAACAAGGCTTGA	-77522212	True	NA	NA	False	AATAAA	-12	NA	77522376	77516667	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_77519865_77521667_77521819_77522108
transcript_117193.nic	chr2	+	1480	7	ISM	ENSG00000066032.19	ENST00000629316.2	3167	17	-346	738581	-211	51731	5prime_fragment	FALSE	canonical	3	30	junction_6	3.41565025531987	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTCTTGGGATCTCCAT	NA	False	NA	NA	False	NA	NA	NA	79512788	79909797	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_79513208_79651551_79651659_79744386_79744583_79858012_79858180_79869815_79869936_79874075_79874343_79909593
transcript_117195.known	chr2	-	2126	2	FSM	ENSG00000162951.11	ENST00000409148.1	2126	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTACAGACTGGTGTAAC	-80304241	False	NA	NA	False	AATAAA	-14	NA	80304274	80301879	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_80303879_80304147
transcript_117196.known	chr2	-	1328	10	FSM	ENSG00000163541.12	ENST00000651342.1	1328	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	185.230786977879	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATCTACTATTTGATTT	-84455313	True	NA	-28	True	NA	NA	NA	84459285	84423550	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_84423773_84425414_84425604_84431507_84431660_84433351_84433436_84436051_84436128_84441046_84441105_84441246_84441460_84443283_84443401_84449648_84449753_84459172
transcript_117198.known	chr2	-	1270	9	FSM	ENSG00000163541.12	ENST00000393868.7	1270	9	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_3	38.7967459975705	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTTGGAGGCTTATT	-84455308	True	NA	-5	True	AATAAA	-19	NA	84459280	84423527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_84423773_84425414_84425604_84431507_84431660_84433351_84433436_84441046_84441105_84441246_84441460_84443283_84443401_84449648_84449753_84459172
transcript_11720.known	chr1	-	2229	2	FSM	ENSG00000181754.7	ENST00000369862.1	2229	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAAAAAATTTTTTCTA	-109509485	True	NA	NA	False	AAAACA	-4	NA	109509738	109507067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_109508978_109509419
transcript_117201.nic	chr2	-	1030	8	ISM	ENSG00000163541.12	ENST00000393868.7	1270	9	-4	1886	1	0	5prime_fragment	FALSE	canonical	3	360	junction_2	40.4439647625488	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCTCCAACAGTGGCCCA	-84455312	True	NA	NA	False	NA	NA	NA	84459284	84425413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_84425604_84431507_84431660_84433351_84433436_84441046_84441105_84441246_84441460_84443283_84443401_84449648_84449753_84459172
transcript_117202.known	chr2	-	568	6	FSM	ENSG00000163541.12	ENST00000442240.5	568	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	225.746229204388	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGGCCATATTCACAAAA	-84455289	True	NA	NA	False	NA	NA	NA	84459261	84441078	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_84441105_84441246_84441460_84443283_84443401_84448928_84448948_84449648_84449753_84459172
transcript_117203.known	chr2	-	1814	7	FSM	ENSG00000186854.11	ENST00000409520.7	1814	7	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	7.41619848709566	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTTTTTTGTATAGATT	-84881073	False	121	-19	True	AATAAA	-27	NA	84881084	84821665	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_84822101_84823952_84824205_84832054_84832146_84839148_84839324_84841860_84842008_84870224_84870786_84880931
transcript_117205.known	chr2	-	1844	6	FSM	ENSG00000186854.11	ENST00000335459.9	1844	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	9.34665715643834	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTTATTCATGATATAT	-84881234	False	NA	-3	True	AATAAA	-43	NA	84881245	84821649	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_84822101_84823952_84824205_84832054_84832146_84839148_84839324_84870224_84870786_84880931
transcript_117207.known	chr2	-	1554	5	FSM	ENSG00000186854.11	ENST00000409133.1	1554	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	3.64005494464026	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTTGAGGCTCTGTGTA	-84881139	False	NA	NA	False	NA	NA	NA	84881150	84837789	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_84838242_84839148_84839324_84841860_84842008_84870224_84870786_84880931
transcript_11721.known	chr1	-	5130	2	FSM	ENSG00000181754.7	ENST00000369864.5	5130	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATCTGACTGGTTTATTTT	-109509474	True	NA	-1	True	ATTAAA	-26	NA	109509727	109504177	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_109509000_109509419
transcript_117214.known	chr2	+	461	3	FSM	ENSG00000034510.6	ENST00000233143.6	461	3	0	0	0	0	multi-exon	FALSE	canonical	3	14371	junction_2	222.5	3193	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGCGTGGTCTGAGTC	84763150	True	NA	19	True	AATAAA	-16	NA	84905655	84906671	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_84905719_84906002_84906118_84906388
transcript_117216.known	chr2	+	7500	7	FSM	ENSG00000176407.18	ENST00000409785.9	7500	7	0	0	0	0	multi-exon	FALSE	non_canonical	2	369	junction_4	108.804105314705	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTTTCCATTGCATTC	84967657	True	NA	3	True	AATAAA	-15	NA	84971160	85059472	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_84971468_85027888_85028057_85035015_85035156_85043563_85043666_85046103_85046279_85049365_85049649_85053147
transcript_117218.nic	chr2	+	2260	7	NIC	ENSG00000176407.18	novel	625	5	NA	NA	313	-5700	combination_of_known_junctions	FALSE	non_canonical	2	28	junction_1	233.378567044096	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGCATGAGGTTTTTTG	84970772	False	NA	23	True	AATAAA	-25	NA	84971473	85053772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_84972241_85027888_85028057_85035015_85035156_85043563_85043666_85046103_85046279_85049365_85049649_85053147
transcript_117223.known	chr2	-	6138	5	FSM	ENSG00000152291.15	ENST00000398263.6	6138	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	60.8604962188118	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTTAATACATTTATTT	-85328015	True	NA	37	True	AATAAA	-20	NA	85328251	85318026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_85322742_85324914_85324999_85326507_85326805_85326978_85327686_85327916
transcript_11723.known	chr1	+	9044	9	FSM	ENSG00000065135.12	ENST00000369851.7	9044	9	0	0	0	0	multi-exon	FALSE	canonical	3	676	junction_1	66.5709208288424	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAGGCAAAAGAAAGATAAT	109534958	True	NA	NA	False	AATAAA	-29	NA	109548614	109600195	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109548839_109573736_109573780_109573895_109574038_109579203_109579362_109582436_109582566_109586215_109586346_109586728_109586883_109592042_109592256_109592344
transcript_117232.known	chr2	-	6050	4	FSM	ENSG00000152291.15	ENST00000377386.8	6050	4	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	22.2311093340441	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTTAATACATTTATTT	-85318978	True	NA	37	True	AATAAA	-20	NA	85327989	85318026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_85322742_85324914_85324999_85326507_85327686_85327916
transcript_117237.known	chr2	-	2235	4	FSM	ENSG00000152291.15	ENST00000409232.7	2235	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	96.1491896308371	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATACTCAGTAGGAACTTT	-85327788	False	NA	-4	True	AATAAA	-33	NA	85328024	85321893	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_85322759_85324914_85324999_85326507_85327686_85327916
transcript_117242.known	chr2	+	2364	14	FSM	ENSG00000115459.18	ENST00000409013.8	2364	14	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	15.8356948306423	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCGTCTCAGGTGTTTT	85354313	True	NA	5	True	AATAAA	-14	NA	85354768	85391748	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_85354830_85355075_85355171_85355554_85355599_85356966_85357253_85362185_85362261_85363096_85363167_85368685_85368755_85369738_85369831_85371085_85371210_85371439_85371563_85377343_85377475_85389750_85389828_85390137_85390266_85390759
transcript_117246.nic	chr2	+	2488	14	NIC	ENSG00000115459.18	novel	2364	14	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	19.2347688148557	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCGTCTCAGGTGTTTT	85354273	True	NA	5	True	AATAAA	-14	NA	85354728	85391748	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_85354830_85355075_85355171_85356966_85357253_85362185_85362261_85363096_85363167_85368685_85368755_85369738_85369831_85371085_85371210_85371439_85371563_85377343_85377475_85387097_85387226_85389750_85389828_85390137_85390266_85390759
transcript_117247.nic	chr2	+	2321	13	NIC	ENSG00000115459.18	novel	2364	14	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	15.4488403016753	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCGTCTCAGGTGTTTT	NA	False	NA	5	True	AATAAA	-14	NA	85354716	85391748	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_85354830_85355554_85355599_85356966_85357253_85362185_85362261_85363096_85363167_85368685_85368755_85369738_85369831_85371085_85371210_85371439_85371563_85377343_85377475_85389750_85389828_85390137_85390266_85390759
transcript_117250.nic	chr2	+	2619	13	NIC	ENSG00000115459.18	novel	2364	14	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	17.1650484674203	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCGTCTCAGGTGTTTT	NA	False	NA	5	True	AATAAA	-14	NA	85354716	85391748	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_85354830_85355554_85355897_85356966_85357253_85362185_85362261_85363096_85363167_85368685_85368755_85369738_85369831_85371085_85371210_85371439_85371563_85377343_85377475_85389750_85389828_85390137_85390266_85390759
transcript_117254.known	chr2	+	2332	13	FSM	ENSG00000115459.18	ENST00000393852.8	2332	13	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	10.6936507641996	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCGTCTCAGGTGTTTT	85354301	True	NA	5	True	AATAAA	-14	NA	85354756	85391748	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_85354830_85355075_85355171_85356966_85357253_85362185_85362261_85363096_85363167_85368685_85368755_85369738_85369831_85371085_85371210_85371439_85371563_85377343_85377475_85389750_85389828_85390137_85390266_85390759
transcript_117279.known	chr2	-	3141	11	FSM	ENSG00000042445.14	ENST00000295802.9	3141	11	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_4	6.99213844256534	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAAGTGGGGTCTGCGCC	-85353903	True	NA	NA	False	AATAAA	-21	NA	85354528	85341954	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_85343382_85343638_85343799_85343998_85344166_85344238_85344349_85344593_85344733_85345974_85346095_85349383_85349582_85350039_85350242_85350779_85351022_85351679_85351863_85354335
transcript_117303.known	chr2	-	1250	10	FSM	ENSG00000042493.16	ENST00000263867.9	1250	10	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_9	202.912132050633	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTGCCCTGGGCTGATT	-85410355	False	5105	-9	True	AATAAA	-34	NA	85410366	85394752	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_85394959_85395537_85395627_85398019_85398153_85398689_85398783_85399135_85399286_85401164_85401330_85401528_85401684_85401784_85401958_85402122_85402159_85410316
transcript_117305.known	chr2	-	1183	10	FSM	ENSG00000042493.16	ENST00000409670.5	1183	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	243.512313679576	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTCAGTGCAGAGGTG	-85408937	True	NA	-84	True	NA	NA	NA	85414042	85394827	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_85394959_85395537_85395627_85398019_85398153_85398689_85398783_85399135_85399286_85401164_85401330_85401528_85401684_85401784_85401958_85402122_85402151_85413976
transcript_11731.known	chr1	+	4081	19	FSM	ENSG00000116337.20	ENST00000528667.7	4081	19	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	54.3832989977304	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCAGGTGGGGTTTCTG	109617219	True	NA	15	True	AATAAA	-15	NA	109619836	109632051	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109620279_109620913_109621267_109625302_109625434_109625661_109625793_109626159_109626229_109626318_109626428_109626725_109626913_109627174_109627317_109627428_109627519_109627773_109627904_109628082_109628278_109628363_109628496_109628642_109628807_109629108_109629236_109629326_109629491_109629795_109629917_109630232_109630407_109630682_109630794_109630942
transcript_117318.nnic	chr2	-	1441	9	NIC	ENSG00000042493.16	novel	1151	10	NA	NA	-7	-269	intron_retention	FALSE	canonical	0	0	junction_8	255.52250390132	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTCTGTTGCCTCTGTCT	-85408944	True	NA	2	True	ATTAAA	-22	NA	85414049	85395163	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_85395627_85398019_85398153_85398689_85398783_85399135_85399286_85401164_85401330_85401528_85401684_85401784_85401958_85402122_85402159_85413976
transcript_11732.known	chr1	+	3728	18	FSM	ENSG00000116337.20	ENST00000342115.8	3728	18	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	27.3493356257433	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCAGGTGGGGTTTCTG	109617219	True	NA	15	True	AATAAA	-15	NA	109619836	109632051	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109620279_109625302_109625434_109625661_109625793_109626159_109626229_109626318_109626428_109626725_109626913_109627174_109627317_109627428_109627519_109627773_109627904_109628082_109628278_109628363_109628496_109628642_109628807_109629108_109629236_109629326_109629491_109629795_109629917_109630232_109630407_109630682_109630794_109630942
transcript_117333.known	chr2	-	7556	15	FSM	ENSG00000115486.13	ENST00000233838.9	7556	15	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_12	19.0194583497629	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAGGAGTTATTGTGCAG	-85559843	True	NA	-4	True	AATAAA	-16	NA	85561493	85544719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_85550127_85550554_85550751_85550924_85551073_85551479_85551611_85551811_85551982_85552415_85552568_85552938_85553071_85553231_85553498_85554142_85554307_85555483_85555591_85556181_85556261_85558439_85558606_85558916_85559076_85560814_85560986_85561385
transcript_117346.known	chr2	-	2314	14	FSM	ENSG00000115486.13	ENST00000430215.7	2314	14	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_13	17.7830449133587	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGGGCGGGGTTCTA	-85559882	True	NA	-108	True	NA	NA	NA	85561532	85549829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_85550127_85550554_85550751_85550924_85551073_85551479_85551611_85551811_85551982_85552415_85552568_85552938_85553071_85553231_85553498_85554142_85554307_85555483_85555591_85556181_85556261_85558439_85558606_85558916_85559076_85561385
transcript_11736.known	chr1	+	3989	17	FSM	ENSG00000116337.20	ENST00000474459.6	3989	17	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	27.567459871196	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTAATGAGGCAGGTGGG	109617213	True	NA	8	True	AATAAA	-8	NA	109619830	109632044	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109620279_109625302_109625434_109625661_109625793_109626159_109626229_109626318_109626428_109626725_109627317_109627428_109627519_109627773_109627904_109628082_109628278_109628363_109628496_109628642_109628807_109629108_109629236_109629326_109629491_109629795_109629917_109630232_109630407_109630682_109630794_109630942
transcript_117373.known	chr2	+	2817	9	FSM	ENSG00000168906.13	ENST00000306434.8	2817	9	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_8	40.0398239256868	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGTTACTCATTTGT	85509763	True	NA	NA	False	AATAAA	-21	NA	85539167	85545281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_85539379_85541082_85541161_85541254_85541378_85541632_85541746_85541828_85541973_85542154_85542374_85542564_85542748_85542900_85543035_85543669
transcript_117378.nic	chr2	+	3538	8	ISM	ENSG00000168906.13	ENST00000306434.8	2817	9	-90	4	-90	-4	intron_retention	FALSE	canonical	3	305	junction_5	32.392364935621	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTGTCTGTTACTCAT	85539063	False	NA	NA	False	AATAAA	-17	NA	85539077	85545277	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_85539379_85541082_85541161_85541254_85541378_85541632_85541746_85541828_85541973_85542154_85542374_85542564_85542748_85542900
transcript_117383.nic	chr2	+	3797	6	ISM	ENSG00000168906.13	ENST00000306434.8	2817	9	-2	1	-2	-1	intron_retention	FALSE	canonical	3	305	junction_5	17.4539393834171	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTGTTACTCATTTG	85509761	True	NA	NA	False	AATAAA	-20	NA	85539165	85545280	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_85539379_85541082_85541161_85541254_85541378_85541632_85541746_85541828_85541973_85542154
transcript_117388.known	chr2	+	691	3	FSM	ENSG00000168906.13	ENST00000469221.5	691	3	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_2	17	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGGTAGCCTTGGAGCAA	85509763	True	NA	NA	False	NA	NA	NA	85539167	85541656	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_85539379_85541082_85541161_85541254
transcript_11739.known	chr1	+	3899	18	FSM	ENSG00000116337.20	ENST00000256578.8	3899	18	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	43.533942530503	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCAGGTGGGGTTTCTG	109620592	False	NA	15	True	AATAAA	-15	NA	109620653	109632051	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109621267_109625302_109625434_109625661_109625793_109626159_109626229_109626318_109626428_109626725_109626913_109627174_109627317_109627428_109627519_109627773_109627904_109628082_109628278_109628363_109628496_109628642_109628807_109629108_109629236_109629326_109629491_109629795_109629917_109630232_109630407_109630682_109630794_109630942
transcript_117390.known	chr2	-	684	3	FSM	ENSG00000115486.13	ENST00000496962.2	657	3	-27	0	-15	0	multi-exon	FALSE	canonical	3	145	junction_1	7.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTTTTATGTGATTATA	NA	False	NA	-9	True	ATTAAA	-18	NA	85561547	85558724	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_85559076_85560814_85560986_85561385
transcript_117391.known	chr2	-	600	2	FSM	ENSG00000115486.13	ENST00000481541.1	600	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGCTACCGGATAAGCT	-85559843	True	NA	NA	False	NA	NA	NA	85561493	85558583	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_85559076_85561385
transcript_117395.known	chr2	+	679	3	FSM	ENSG00000118640.11	ENST00000263864.10	679	3	0	0	0	0	multi-exon	FALSE	canonical	3	658	junction_2	4.5	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGAGGCACTTTCTC	85571519	True	NA	26	True	AATAAA	-19	NA	85577585	85582031	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_85577650_85579008_85579168_85581575
transcript_117397.known	chr2	+	805	4	FSM	ENSG00000118640.11	ENST00000409760.1	805	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	313.485069642701	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGAGGCACTTTCTC	85571526	True	NA	26	True	AATAAA	-19	NA	85577592	85582031	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_85577650_85579008_85579168_85579741_85579875_85581575
transcript_11740.known	chr1	+	3590	17	FSM	ENSG00000116337.20	ENST00000667949.2	3590	17	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	47.3292985369528	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTAATGAGGCAGGTGGG	109617219	True	NA	8	True	AATAAA	-8	NA	109619836	109632044	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109620279_109625661_109625793_109626159_109626229_109626318_109626428_109626725_109626913_109627174_109627317_109627428_109627519_109627773_109627904_109628082_109628278_109628363_109628496_109628642_109628807_109629108_109629236_109629326_109629491_109629795_109629917_109630232_109630407_109630682_109630794_109630942
transcript_117406.known	chr2	+	660	3	FSM	ENSG00000168899.5	ENST00000306384.5	660	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	12.5	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGGTCCCCAGGTTGG	85583943	True	NA	28	True	ATTAAA	-15	NA	85584430	85593406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_85584494_85591724_85591863_85592947
transcript_117409.known	chr2	+	685	5	FSM	ENSG00000168894.10	ENST00000306368.9	685	5	0	0	0	0	multi-exon	FALSE	canonical	3	1633	junction_3	133.121185391357	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGGACTCATGGCAGTG	85582296	True	NA	87	True	NA	NA	NA	85595744	85597708	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_85595850_85596518_85596650_85596821_85596932_85597103_85597179_85597444
transcript_117410.known	chr2	+	535	5	FSM	ENSG00000168894.10	ENST00000443647.5	535	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	786.163787006245	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCCAGGGGCTCTGCAT	85582307	True	NA	-17	True	ATTAAA	-39	NA	85595755	85597604	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_85595850_85596518_85596650_85596856_85596932_85597103_85597179_85597444
transcript_117411.known	chr2	+	559	4	FSM	ENSG00000168894.10	ENST00000456023.1	559	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	908.18732771506	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTCTGCATCCTCCATCA	85582368	False	NA	-8	True	NA	NA	NA	85595816	85597613	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_85595850_85596518_85596650_85596952_85597179_85597444
transcript_117412.nnic	chr2	+	523	4	NIC	ENSG00000168894.10	novel	535	5	NA	NA	-32	0	combination_of_known_splicesites	FALSE	canonical	3	94	junction_2	875.190011115047	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCCAGGGGCTCTGCAT	NA	False	NA	-17	True	ATTAAA	-39	NA	85595692	85597604	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_85595850_85596518_85596650_85597103_85597179_85597444
transcript_11742.known	chr1	+	1394	8	FSM	ENSG00000168765.18	ENST00000369836.9	1394	8	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_2	11.5511285781335	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTATAGTCTTGTCTTA	109655449	True	NA	13	True	AATAAA	-13	NA	109656098	109661700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109656426_109656711_109656788_109657214_109657280_109657589_109657672_109657771_109657873_109658813_109658910_109658999_109659111_109661164
transcript_11743.known	chr1	+	1321	8	FSM	ENSG00000168765.18	ENST00000326729.9	1321	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_7	51.4805293092367	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTATCTTAGTGGTGTC	109655472	True	NA	3	True	AATAAA	-17	NA	109656121	109665496	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109656426_109656711_109656788_109657214_109657280_109657589_109657672_109657771_109657873_109658813_109658910_109658999_109659111_109665010
transcript_117433.known	chr2	+	2034	14	FSM	ENSG00000168883.20	ENST00000409470.5	2034	14	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_13	153.714790070411	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTCTTGTTTTATATC	85603791	True	NA	22	True	ATTAAA	-19	NA	85616168	85649280	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_85616464_85619219_85619290_85621484_85621580_85623645_85623783_85625538_85625692_85630720_85630947_85636052_85636131_85637368_85637437_85639202_85639392_85640975_85641119_85644947_85645084_85647929_85648017_85648760_85648854_85649016
transcript_117438.known	chr2	+	2148	13	FSM	ENSG00000168883.20	ENST00000459775.5	2148	13	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	260.95320727841	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTCTTGTTTTATATC	85602701	True	NA	22	True	ATTAAA	-19	NA	85602855	85649280	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_85603082_85619219_85619290_85621484_85621580_85623625_85623783_85625538_85625692_85630720_85630947_85636052_85636131_85637368_85637437_85639202_85639392_85640975_85641119_85644947_85645084_85647929_85648017_85648760
transcript_11744.known	chr1	+	1166	8	FSM	ENSG00000213366.13	ENST00000241337.9	1166	8	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_5	7.23088613419644	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGTGTGTCTTGTCTT	109667408	True	NA	NA	False	AGTAAA	-13	NA	109668056	109675286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109668152_109668424_109668501_109668924_109668990_109669289_109669372_109669470_109669572_109671286_109671383_109671472_109671584_109674746
transcript_117441.known	chr2	+	2161	13	FSM	ENSG00000168883.20	ENST00000613444.4	2161	13	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	198.950580128165	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCTTGTTTTATATCTT	85611966	True	NA	24	True	ATTAAA	-21	NA	85612102	85649282	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_85612360_85619219_85619290_85621484_85621580_85623645_85623783_85625538_85625692_85630720_85630947_85636052_85636131_85637368_85637437_85639202_85639392_85640975_85641119_85644947_85645084_85647929_85648017_85648760
transcript_117442.nic	chr2	+	2241	13	NIC	ENSG00000168883.20	novel	2034	14	NA	NA	2	0	intron_retention	FALSE	canonical	3	21	junction_3	194.386409990228	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTCTTGTTTTATATC	85603767	True	NA	22	True	ATTAAA	-19	NA	85616144	85649280	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_85616464_85619219_85619290_85621484_85621580_85623625_85623783_85625538_85625692_85630720_85630947_85636052_85636131_85637368_85637437_85639202_85639392_85640975_85641119_85644947_85645084_85647929_85648017_85648760
transcript_117443.known	chr2	+	2183	13	FSM	ENSG00000168883.20	ENST00000323701.11	2183	13	0	0	0	0	multi-exon	FALSE	canonical	3	598	junction_1	62.185877282011	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTTGTTTTATATCTTT	85603808	True	NA	25	True	ATTAAA	-22	NA	85616185	85649283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_85616464_85619219_85619290_85621484_85621580_85623645_85623783_85625538_85625692_85630720_85630947_85636052_85636131_85637368_85637437_85639202_85639392_85640975_85641119_85644947_85645084_85647929_85648017_85648760
transcript_117452.known	chr2	+	2033	12	FSM	ENSG00000168883.20	ENST00000409766.7	2033	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_10	200.284013217264	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCAGCCTCTTGTTTTAT	85603816	True	NA	19	True	ATTAAA	-16	NA	85616193	85649277	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_85616464_85619219_85619290_85621484_85621580_85623645_85623783_85625538_85625692_85630720_85630947_85636052_85636131_85637368_85637437_85639202_85639392_85640975_85641119_85647929_85648017_85648760
transcript_117466.known	chr2	-	1553	8	FSM	ENSG00000168890.14	ENST00000334462.10	1553	8	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_4	21.0082588230322	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTAGCCTGTTCTGGA	-85591389	False	11309	0	True	ATTAAA	-17	NA	85602698	85598546	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_85599318_85599524_85599703_85599890_85600019_85600344_85600413_85601020_85601108_85601434_85601483_85601883_85602065_85602606
transcript_11747.known	chr1	+	1159	7	FSM	ENSG00000168765.18	ENST00000495742.5	1159	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	56.7090527752551	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTATAGTCTTGTCTTA	109655602	False	NA	13	True	AATAAA	-13	NA	109656251	109661700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109656426_109656711_109656788_109657214_109657280_109657771_109657873_109658813_109658910_109658999_109659111_109661164
transcript_117472.known	chr2	-	1810	7	FSM	ENSG00000168890.14	ENST00000444380.5	1810	7	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_4	22.4629324295234	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTATATTAAAAGAAT	-85591350	False	11309	-31	True	NA	NA	NA	85602659	85598577	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_85599318_85599524_85599703_85599890_85600019_85600344_85600413_85601020_85601483_85601883_85602065_85602606
transcript_117473.known	chr2	-	1484	7	FSM	ENSG00000168890.14	ENST00000306353.7	1484	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	36.8631101358647	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTGTAGCCTGTTCTGG	-85591389	False	11309	-1	True	ATTAAA	-16	NA	85602698	85598547	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_85599318_85599524_85599703_85599890_85600019_85601020_85601108_85601434_85601483_85601883_85602065_85602606
transcript_11748.known	chr1	-	4046	8	FSM	ENSG00000134202.12	ENST00000256594.7	4046	8	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	6.92820323027551	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCCATGTGCCTAATTT	NA	False	NA	NA	False	AATAAA	-25	NA	109740516	109733931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_109737170_109737456_109737568_109737655_109737752_109738090_109738192_109738284_109738367_109739428_109739494_109739832_109739909_109740239
transcript_117493.known	chr2	-	915	5	FSM	ENSG00000168890.14	ENST00000417791.5	915	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	45.0832563153994	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCTACCAAGGGGCCACC	-85591356	False	11309	NA	False	GGGGCT	-27	NA	85602665	85599617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_85599703_85599890_85600019_85601020_85601483_85601883_85602065_85602606
transcript_117507.known	chr2	-	4274	4	FSM	ENSG00000168887.11	ENST00000306336.6	4274	4	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_2	27.0102861065105	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTTGCCAAGAGTTGT	-85600757	True	NA	-10	True	AATAAA	-19	NA	85612066	85605253	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_85609068_85609434_85609587_85611667_85611787_85611877
transcript_117512.known	chr2	-	2323	5	FSM	ENSG00000168890.14	ENST00000431593.5	2323	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	44.7178655572915	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTTGTAGCCTGTTCTG	-85591360	False	11309	-2	True	ATTAAA	-15	NA	85602669	85598548	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_85599318_85599524_85599703_85599890_85600019_85601020_85601483_85601883
transcript_117517.known	chr2	-	2489	8	FSM	ENSG00000115525.18	ENST00000638227.1	2489	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	11.9454542630668	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCCAGTTTAAAAAGATG	-85888653	True	NA	-61	True	AAAAAG	-42	NA	85889000	85839193	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_85840393_85844395_85844555_85846376_85846564_85847860_85848205_85861180_85861293_85863361_85863486_85870071_85870259_85888823
transcript_117518.known	chr2	-	2064	7	FSM	ENSG00000115525.18	ENST00000638678.1	2064	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	10.6262254195301	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGTGCCAGTTTAAAAAGA	-85888556	True	NA	-63	True	AAAAAG	-40	NA	85888903	85839195	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_85840393_85844395_85844555_85846376_85846425_85847860_85848205_85861180_85861293_85863361_85863486_85888823
transcript_117519.known	chr2	-	2165	7	FSM	ENSG00000115525.18	ENST00000377332.8	2165	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	11.6141675934562	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAAAAACTTTTGAGGAA	-85888611	True	NA	-36	True	AAAAAG	-9	NA	85888958	85839168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_85840393_85844395_85844555_85846376_85846564_85847860_85848085_85861180_85861293_85863361_85863486_85888823
transcript_11752.known	chr1	+	3994	9	FSM	ENSG00000184371.14	ENST00000329608.11	3994	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	3.40725329260975	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGAGTCGTGGGAAAGT	109910751	True	NA	8	True	AATAAA	-18	NA	109910848	109930992	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109911063_109914258_109914382_109915633_109915697_109917292_109917464_109921846_109921995_109923165_109924191_109924775_109924829_109925146_109925203_109928851
transcript_117520.known	chr2	-	4366	7	FSM	ENSG00000115525.18	ENST00000638572.2	4366	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	6.41396046829795	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTTTTGTTTTGGATA	-85888643	True	NA	NA	False	AATAAA	-26	NA	85888990	85837119	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_85840393_85844395_85844555_85846376_85846564_85847860_85848205_85861180_85861293_85863361_85863486_85888823
transcript_117524.known	chr2	-	2131	6	FSM	ENSG00000115525.18	ENST00000639119.1	2131	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	10.9361784915939	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAAAAACTTTTGAGGAA	-85888616	True	NA	-36	True	AAAAAG	-9	NA	85888963	85839168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_85840393_85846376_85846564_85847860_85848205_85861180_85861293_85863361_85863486_85888823
transcript_117528.known	chr2	-	12480	34	FSM	ENSG00000068654.17	ENST00000263857.11	12480	34	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_31	26.9660535502905	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATTGGTTATTCTGAT	-86101595	True	NA	-12	True	AATAAA	-19	NA	86105886	86020215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_86027524_86027884_86028050_86028593_86028712_86030195_86030397_86031329_86031636_86032271_86032383_86033660_86033788_86038699_86038858_86039326_86039463_86040391_86040560_86041888_86042104_86042973_86043196_86044138_86044305_86045277_86045361_86045616_86045770_86047164_86047264_86048883_86049043_86049159_86049243_86052816_86053001_86054139_86054290_86065273_86065466_86070017_86070273_86075029_86075261_86077858_86077982_86078113_86078285_86080815_86080979_86081600_86081707_86083081_86083169_86088565_86088670_86088784_86088871_86089821_86089930_86098610_86098761_86099967_86100173_86105699
transcript_117529.known	chr2	-	6454	34	FSM	ENSG00000068654.17	ENST00000409681.1	6454	34	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	38.1041779160192	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTCCCTTGGTTTGCAG	-86106144	True	NA	-18	True	AAGAAA	-26	NA	86106155	86026327	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_86027524_86027884_86028050_86028593_86028712_86030195_86030397_86031512_86031636_86032271_86032383_86033660_86033788_86038699_86038858_86039326_86039463_86040391_86040560_86041888_86042104_86042973_86043196_86044138_86044305_86045277_86045361_86045616_86045770_86047164_86047264_86048883_86049043_86049159_86049243_86052816_86053001_86054139_86054290_86065273_86065466_86070017_86070273_86075029_86075261_86077858_86077982_86078113_86078285_86080815_86080979_86081600_86081707_86083081_86083169_86088565_86088670_86088784_86088871_86089821_86089930_86098610_86098761_86099967_86100173_86105699
transcript_11753.known	chr1	+	1083	9	FSM	ENSG00000184371.14	ENST00000420111.6	1083	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	3.68908864084343	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCCAGAGGATGCTCCC	109910810	False	NA	NA	False	NA	NA	NA	109910907	109929034	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109911063_109914258_109914382_109915633_109915697_109917292_109917464_109921846_109921995_109924059_109924191_109924775_109924829_109925146_109925203_109928851
transcript_117537.known	chr2	-	1427	10	FSM	ENSG00000068654.17	ENST00000486964.5	1427	10	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_7	22.1281341506159	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATAAGCCTACTGGAATT	-86101582	True	NA	NA	False	AATAAA	-23	NA	86105873	86078040	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_86078285_86080815_86080979_86081600_86081707_86083081_86083169_86088565_86088670_86088784_86088871_86089821_86089930_86098610_86098761_86099967_86100173_86105699
transcript_117538.nic	chr2	-	2464	9	ISM	ENSG00000068654.17	ENST00000486964.5	1427	10	-23	1517	-6	215	5prime_fragment	FALSE	canonical	3	140	junction_6	23.4250800425527	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCGTCCCCTTTGTCAA	-86101605	True	NA	NA	False	ATTAAA	-14	NA	86105896	86079557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_86080979_86081600_86081707_86083081_86083169_86088565_86088670_86088784_86088871_86089821_86089930_86098610_86098761_86099967_86100173_86105699
transcript_117551.known	chr2	+	6681	24	FSM	ENSG00000132300.19	ENST00000254630.12	6681	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	152.020257828258	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGTGGCTCACACCTGTA	86094357	True	NA	7	True	AATAAA	-14	NA	86106234	86142157	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_86106352_86108349_86108403_86108499_86108537_86111112_86111159_86116529_86116599_86117054_86117160_86118920_86119045_86121478_86121595_86123700_86123763_86124994_86125083_86125454_86125516_86125794_86125881_86127160_86127306_86127940_86127992_86130647_86130738_86131077_86131107_86132317_86132425_86133177_86133257_86133345_86133437_86134291_86134378_86134838_86134988_86136520_86136563_86136981_86137141_86137468
transcript_117585.known	chr2	-	2670	15	FSM	ENSG00000132305.22	ENST00000449247.6	2670	15	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_11	125.086602652983	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCTTATCCCTTTTCAAA	-86190734	True	NA	-7	True	AATAAA	-20	NA	86195472	86143931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_86144882_86146067_86146198_86147701_86147834_86151296_86151521_86153559_86153575_86158591_86158722_86159535_86159672_86161975_86162080_86166507_86166645_86170748_86170845_86171207_86171313_86173649_86173762_86179432_86179623_86181298_86181373_86195337
transcript_117586.known	chr2	-	2627	15	FSM	ENSG00000132305.22	ENST00000442664.6	2627	15	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_10	173.333052066752	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTATCTTATCCCTTTT	-86195317	False	NA	-11	True	AATAAA	-16	NA	86195403	86143935	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_86144882_86146067_86146198_86147701_86147834_86151296_86151521_86153559_86153575_86158591_86158722_86159535_86159672_86161975_86162080_86166507_86166645_86170748_86170842_86171207_86171346_86173649_86173762_86179432_86179623_86181298_86181373_86195337
transcript_117609.nic	chr2	-	699	6	ISM	ENSG00000132305.22	ENST00000449247.6	2670	15	-29	26859	-29	0	5prime_fragment	FALSE	canonical	3	313	junction_2	179.838149456671	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCTTGCACAACAGGAAAAA	-86190763	True	NA	NA	False	NA	NA	NA	86195501	86170790	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_86170845_86171207_86171313_86173649_86173762_86179432_86179623_86181298_86181373_86195337
transcript_117611.known	chr2	-	631	4	FSM	ENSG00000132305.22	ENST00000486633.1	631	4	0	0	0	0	multi-exon	FALSE	canonical	3	557	junction_1	105.122151170277	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTTCAAGCGATTCTC	-86190712	True	NA	NA	False	NA	NA	NA	86195450	86173507	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_86173762_86179432_86179623_86181298_86181373_86195337
transcript_117613.known	chr2	+	1061	5	FSM	ENSG00000132313.15	ENST00000254644.12	1061	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	138.592929112563	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAAATGATGTTCGATTAT	86199324	False	NA	NA	False	AATAAA	-22	NA	86199354	86212838	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_86199534_86206105_86206296_86207182_86207328_86210479_86210614_86212425
transcript_117615.known	chr2	+	651	5	FSM	ENSG00000132313.15	ENST00000409180.1	651	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_4	115.648983998996	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTTTCTGCCGATGATTT	86197421	True	NA	-37	True	NA	NA	NA	86199462	86213738	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_86199534_86206105_86206296_86207182_86207328_86210479_86210614_86213627
transcript_117619.known	chr2	+	3723	4	FSM	ENSG00000132313.15	ENST00000337109.9	3723	4	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_3	3.2659863237109	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGTAGTTGTGTGATGA	86197415	True	NA	15	True	AATAAA	-15	NA	86199456	86213790	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_86199534_86206105_86206296_86207182_86207328_86210479
transcript_11762.known	chr1	+	3943	17	FSM	ENSG00000168710.18	ENST00000369799.10	3943	17	0	0	0	0	multi-exon	FALSE	canonical	3	745	junction_1	35.8808248755516	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCAGTCCGTATGTGTCA	109971297	True	NA	24	True	ATTAAA	-25	NA	109984764	110023742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_109985173_110009033_110009146_110011213_110011358_110012361_110012463_110012896_110013000_110014762_110014858_110015424_110015532_110016343_110016461_110016666_110016731_110017494_110017584_110017945_110018017_110018372_110018468_110018551_110018651_110019050_110019120_110019547_110019627_110020730_110020852_110021673
transcript_117626.known	chr2	-	3857	7	FSM	ENSG00000068615.20	ENST00000165698.9	3857	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.96741563579414	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTTGTAATGTTGGGCT	-86337506	True	NA	NA	False	AATAAA	-26	NA	86337654	86213992	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_86217111_86232624_86232803_86251956_86252071_86254693_86254815_86263964_86264042_86282169_86282243_86337478
transcript_117627.known	chr2	+	4621	26	FSM	ENSG00000115548.17	ENST00000409064.5	4621	26	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_1	37.3360094278968	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCTCAGTTTATTGGC	86438435	True	NA	14	True	ATTAAA	-15	NA	86441460	86492716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_86441489_86442017_86442234_86449806_86449963_86451102_86451214_86455084_86455188_86456441_86456567_86456804_86456878_86456982_86457072_86464052_86464217_86466371_86466884_86470203_86470409_86474775_86474991_86477876_86478030_86478169_86478266_86478607_86478736_86480166_86480363_86481929_86482103_86482457_86482695_86483986_86484159_86484941_86485030_86485728_86485860_86489317_86489438_86489519_86489660_86490880_86491058_86491140_86491276_86492038
transcript_117632.known	chr2	-	3138	6	FSM	ENSG00000115561.16	ENST00000263856.9	3138	6	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	6.88767014308903	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTGTCTCGTTTGACTG	-86561886	True	NA	1	True	AATAAA	-28	NA	86563443	86503429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_86505950_86507478_86507594_86510357_86510480_86529217_86529398_86542251_86542313_86563303
transcript_117637.known	chr2	-	1099	5	FSM	ENSG00000115561.16	ENST00000409225.2	1099	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	53.8580309703205	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCATTGTAGATTGCCCTG	-86561922	True	NA	0	True	AATAAA	-20	NA	86563479	86505443	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_86505950_86507478_86507594_86510357_86510480_86529217_86529398_86563303
transcript_117639.known	chr2	-	1293	5	FSM	ENSG00000239305.7	ENST00000477307.5	1293	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	19.8997487421324	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGAAGAAGAGAAGGCGCA	-86623447	True	NA	NA	False	NA	NA	NA	86623866	86604599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_86605419_86612158_86612275_86620329_86620470_86622660_86622828_86623815
transcript_11764.known	chr1	+	2503	17	FSM	ENSG00000168710.18	ENST00000359172.3	2503	17	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	197.255376590221	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAAATTAAGGAGA	110004119	False	NA	NA	False	NA	NA	NA	110004130	110022389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_110004452_110009033_110009146_110011213_110011358_110012361_110012463_110012896_110013000_110014762_110014858_110015424_110015532_110016343_110016461_110016666_110016731_110017494_110017584_110017945_110018017_110018372_110018468_110018551_110018651_110019050_110019120_110019547_110019627_110020730_110020852_110021673
transcript_117640.known	chr2	-	3482	4	FSM	ENSG00000239305.7	ENST00000237455.5	3482	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	3.77123616632825	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTACAGATTTTCCAATGT	-86623446	True	NA	NA	False	AATAAA	-18	NA	86623865	86603397	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_86605419_86612158_86612275_86620329_86620470_86622660
transcript_117643.known	chr2	+	6183	9	FSM	ENSG00000153561.13	ENST00000283632.5	6183	9	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_2	42.1188793773054	209	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGGAACCAGTCTGTA	86714404	True	NA	25	True	ATTAAA	-22	NA	86720290	86778041	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_86720810_86740926_86741070_86751895_86752031_86753457_86753559_86765026_86765194_86765858_86766025_86770022_86770126_86771557_86771713_86773347
transcript_117646.known	chr2	-	2217	11	FSM	ENSG00000285793.1	ENST00000648819.1	2217	11	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_3	135.092708907624	341	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGTGTTTTGGTTTGA	-87073675	True	NA	NA	False	AATAAA	-20	NA	87076429	87030674	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_87030908_87031815_87031899_87032068_87032204_87034151_87034244_87037293_87037529_87043712_87043985_87047187_87047307_87049588_87049804_87052813_87052993_87055657_87055801_87075918
transcript_117659.known	chr2	+	529	2	FSM	ENSG00000222041.12	ENST00000331944.10	529	2	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGCTTATTAGCTATC	87455351	True	NA	NA	False	ATTAAA	-23	NA	87455428	87521518	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_87455646_87521206
transcript_117661.known	chr2	+	2638	18	FSM	ENSG00000284879.1	ENST00000643276.1	2638	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	210.903641554055	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAATTCAGAAATAAAATAA	87455398	False	NA	NA	False	NA	NA	NA	87455475	87739214	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_87455646_87583257_87583347_87606592_87606770_87700983_87701054_87704332_87704601_87707761_87707911_87713358_87713438_87714047_87714085_87714178_87714250_87716611_87716791_87719806_87720022_87722300_87722420_87725936_87726209_87732386_87732622_87735673_87735766_87737717_87737853_87738022_87738106_87739016
transcript_117666.known	chr2	-	1807	4	FSM	ENSG00000172086.9	ENST00000347055.4	1807	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	6.18241233033047	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGTTGTGTGTCAGTC	-88054206	True	NA	-5	True	AATAAA	-16	NA	88055783	88027204	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_88028586_88034133_88034293_88036942_88037052_88055625
transcript_117673.known	chr2	+	2082	9	FSM	ENSG00000144115.18	ENST00000674334.2	2082	9	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_8	19.2028643696715	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCGGCACGTCTCTGGG	88169981	True	NA	5	True	AATAAA	-18	NA	88170345	88186627	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_88170457_88173138_88173374_88174638_88174834_88175248_88175402_88178782_88179014_88182698_88182848_88182947_88183074_88185327_88185480_88185897
transcript_117676.known	chr2	+	2052	9	FSM	ENSG00000144115.18	ENST00000343544.8	2052	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	20.8922084758888	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCGGCACGTCTCTGGG	88170033	True	NA	5	True	AATAAA	-18	NA	88170397	88186627	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_88170457_88173138_88173374_88174638_88174834_88175248_88175402_88178782_88179014_88182698_88182848_88182947_88183074_88185550_88185725_88185897
transcript_117681.known	chr2	+	1678	8	FSM	ENSG00000144115.18	ENST00000496844.6	1678	8	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_1	12.2324426449187	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAAGGTGGGAGCAGCTC	88170064	True	NA	NA	False	NA	NA	NA	88170428	88186458	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_88170457_88173138_88173374_88174638_88174834_88175248_88175402_88178782_88179014_88182698_88182848_88182947_88183074_88185897
transcript_117690.nnic	chr2	+	1700	7	NIC	ENSG00000144115.18	novel	2082	9	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	16.4561707439962	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCGGCACGTCTCTGGG	88169976	True	NA	5	True	AATAAA	-18	NA	88170340	88186627	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_88170457_88174638_88174834_88175248_88175402_88178782_88179014_88182698_88182848_88182947_88183074_88185897
transcript_117700.known	chr2	+	4580	7	FSM	ENSG00000144115.18	ENST00000674282.1	4580	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_6	9.10433352249844	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCGGCACGTCTCTGGG	88170013	True	NA	5	True	AATAAA	-18	NA	88170377	88186627	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_88173374_88174638_88174834_88175248_88175402_88178782_88179014_88182698_88182848_88182947_88183074_88185897
transcript_117702.known	chr2	-	4346	18	FSM	ENSG00000172071.15	ENST00000652099.1	4346	18	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_15	36.0700011463676	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTATAGGTAACAGTTTA	-88627240	False	NA	NA	False	NA	NA	NA	88627272	88556934	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_88557937_88558916_88558980_88562288_88562391_88570873_88571042_88574665_88575447_88576553_88576704_88579517_88579641_88583429_88583543_88585840_88586062_88587981_88588105_88588760_88588902_88590442_88590606_88590817_88591053_88593271_88593406_88593912_88594109_88595468_88595664_88613723_88613854_88626966
transcript_117703.known	chr2	-	4536	17	FSM	ENSG00000172071.15	ENST00000303236.9	4536	17	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_7	16.6901917304745	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTGACTCTTATTTTG	-88624043	True	NA	-2	True	AATAAA	-17	NA	88627464	88556740	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_88557937_88558916_88558980_88562288_88562391_88570873_88571042_88574665_88575447_88576553_88576704_88579517_88579641_88583429_88583543_88585840_88586062_88587981_88588105_88588760_88588902_88590442_88590606_88590817_88591053_88593271_88593406_88595468_88595664_88613723_88613854_88626966
transcript_117707.known	chr2	+	1614	2	FSM	ENSG00000234028.4	ENST00000453008.3	1616	2	0	2	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTACTTTTGTGTCTTAC	88627518	False	NA	13	True	AATAAA	-14	NA	88627538	88631819	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_88628733_88631399
transcript_117709.known	chr2	+	1813	9	FSM	ENSG00000153574.9	ENST00000283646.5	1813	9	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_3	19.0262975904404	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTCTTTTGTCTTTA	88686398	True	NA	6	True	AATAAA	-15	NA	88691672	88750929	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_88691984_88698483_88698545_88700008_88700065_88729277_88729338_88734551_88734617_88735668_88735738_88736534_88736677_88737976_88738077_88749980
transcript_117712.nnic	chr2	+	1791	8	NIC	ENSG00000153574.9	novel	1813	9	NA	NA	-38	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_3	85.7811643851102	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTCTTTTGTCTTTA	NA	False	NA	6	True	AATAAA	-15	NA	88691634	88750929	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_88691984_88698483_88698545_88700008_88700065_88734551_88734617_88735668_88735738_88736534_88736677_88737976_88738077_88749980
transcript_117715.nic	chr2	+	1037	4	ISM	ENSG00000153574.9	ENST00000283646.5	1813	9	-38	21081	-38	-21081	5prime_fragment	FALSE	canonical	3	228	junction_3	24.9933324442073	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAAGAATCAAATAGAC	NA	False	NA	NA	False	AATAAA	-9	NA	88691634	88729848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_88691984_88698483_88698545_88700008_88700065_88729277
transcript_117716.known	chr2	-	1196	3	FSM	ENSG00000283196.2	ENST00000636531.1	1196	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	9	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCATGAGTCAGATCCCG	NA	False	NA	NA	False	ATTAAA	-13	NA	89585615	89542841	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_89543837_89581005_89581141_89585549
transcript_117717.known	chr2	-	622	4	FSM	ENSG00000283196.2	ENST00000636560.1	622	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	9.46337971105226	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTGACTGAATGCTGTG	NA	False	NA	NA	False	AATAAA	-20	NA	89585608	89562334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_89562685_89580557_89580636_89581005_89581141_89585549
transcript_117721.known	chr2	+	1084	4	FSM	ENSG00000172005.11	ENST00000309988.9	1084	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATTTGTTGGGTGTTTTT	NA	False	NA	NA	False	TATAAA	-17	NA	95025707	95053992	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_95025886_95047958_95048127_95049580_95049707_95053380
transcript_117723.known	chr2	-	3298	12	FSM	ENSG00000144029.12	ENST00000272418.7	3298	12	0	0	0	0	multi-exon	TRUE	canonical	3	654	junction_5	98.9962850960071	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTGTACTTACTATCTG	-95117194	True	NA	NA	False	AATAAA	-33	NA	95121808	95085368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_95087582_95090385_95090523_95100473_95100537_95100836_95100895_95101676_95101724_95104639_95104731_95106422_95106458_95108174_95108409_95109915_95110042_95115065_95115204_95117864_95117946_95121733
transcript_117728.known	chr2	-	1359	11	FSM	ENSG00000144029.12	ENST00000345084.9	1359	11	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_5	227.702788740059	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTTGAGCACATGTTAT	-95117185	True	NA	-20	True	AATAAA	-15	NA	95121799	95087207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_95087582_95090385_95090523_95100473_95100537_95100836_95100895_95101676_95101724_95106422_95106458_95108174_95108409_95109915_95110042_95115065_95115204_95117864_95117946_95121733
transcript_117729.nnic	chr2	-	1515	11	NNC	ENSG00000144029.12	novel	1359	11	NA	NA	-221	0	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_6	307.263990731098	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTTGAGCACATGTTAT	NA	False	NA	-20	True	AATAAA	-15	NA	95122034	95087207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_95087582_95090385_95090523_95100473_95100537_95100836_95100895_95101676_95101724_95106422_95106458_95108253_95108409_95109915_95110042_95115065_95115204_95117864_95117946_95121733
transcript_117736.known	chr2	-	2755	5	FSM	ENSG00000144026.12	ENST00000411425.1	2755	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	4.32290411644765	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCATGGGTGCAGAGGAT	-95158591	False	NA	-101	True	NA	NA	NA	95159337	95148302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_95150268_95152673_95152770_95153132_95153260_95157350_95157440_95158859
transcript_117741.nic	chr2	-	614	4	ISM	ENSG00000144029.12	ENST00000475895.5	1672	7	-221	6195	-221	5174	5prime_fragment	FALSE	canonical	3	809	junction_3	34.1792659696229	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATCTGAACAGGGGTCAGA	NA	False	NA	NA	False	AAAAAG	-35	NA	95122034	95109947	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_95110042_95115065_95115204_95117864_95117946_95121733
transcript_117744.known	chr2	+	3580	5	FSM	ENSG00000275111.5	ENST00000614034.5	3580	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	2.87228132326901	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGCTGATGACTGTCC	95165451	True	NA	5	True	AATAAA	-17	NA	95165808	95184317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_95165861_95176187_95176260_95177482_95177610_95180158_95180273_95181102
transcript_117746.known	chr2	+	3885	4	FSM	ENSG00000275111.5	ENST00000617923.4	3885	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	6.34209919681348	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGCTGATGACTGTCC	95165330	True	NA	5	True	AATAAA	-17	NA	95165431	95184317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_95165861_95177482_95177610_95180158_95180273_95181102
transcript_117749.known	chr2	+	4731	24	FSM	ENSG00000155066.16	ENST00000317620.14	4731	24	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_2	3.67024514615744	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAAACCATTTTTAAAATA	95274043	True	NA	11	True	AATAAA	-23	NA	95274448	95291302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_95274830_95275460_95275511_95275929_95276133_95276226_95276348_95276593_95276658_95276971_95277062_95277363_95277567_95277929_95278005_95278720_95278785_95278984_95279145_95279844_95279998_95281241_95281366_95281924_95282017_95282141_95282227_95284968_95285116_95285638_95285711_95286478_95286572_95286803_95286858_95287132_95287214_95287395_95287465_95288210_95288301_95288482_95288590_95288932_95289007_95289223
transcript_117756.known	chr2	+	2922	24	FSM	ENSG00000155066.16	ENST00000403131.6	2922	24	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_23	4.08464319358541	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCATTTTTAAAATATTTT	95274047	True	NA	15	True	AATAAA	-27	NA	95274452	95291306	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_95274830_95275460_95275511_95275929_95276133_95276226_95276348_95276593_95276658_95276971_95277062_95277363_95277567_95277929_95278005_95278720_95278785_95278984_95279145_95279844_95279998_95281241_95281366_95281924_95282017_95282141_95282227_95284968_95285116_95285638_95285711_95286478_95286572_95286803_95286858_95287132_95287214_95287395_95287465_95288210_95288301_95288482_95288590_95288932_95289007_95291032
transcript_117757.known	chr2	+	2891	9	FSM	ENSG00000115041.13	ENST00000295225.10	2891	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.40867845869808	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGATTCCTGTTGGCTTT	95297296	True	NA	11	True	AATAAA	-18	NA	95297346	95386077	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_95297454_95310354_95310521_95374295_95374421_95374847_95374918_95375137_95375209_95381595_95381704_95382376_95382482_95383231_95383295_95384001
transcript_117758.known	chr2	+	985	8	FSM	ENSG00000115041.13	ENST00000468529.1	985	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	1.16057691494799	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACGTCCAAAGGAGTGCA	95346703	False	NA	NA	False	NA	NA	NA	95346727	95384049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_95347123_95374295_95374421_95374847_95374918_95375137_95375209_95381595_95381704_95382376_95382482_95383231_95383295_95384001
transcript_117760.known	chr2	+	1366	9	FSM	ENSG00000115042.10	ENST00000447036.5	1366	9	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	121.268039895102	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCTTCAATAAATTCGT	95397393	True	NA	-24	True	NA	NA	NA	95402722	95413096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_95402873_95405276_95405403_95405552_95405804_95406940_95407158_95410526_95410587_95410863_95411027_95412433_95412543_95412676_95412765_95412894
transcript_117762.nic	chr2	+	1530	9	NIC	ENSG00000115042.10	novel	1366	9	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	143.684060963629	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCTTCAATAAATTCGT	95397349	True	NA	-24	True	NA	NA	NA	95402678	95413096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_95402993_95405276_95405403_95405552_95405804_95406940_95407158_95410526_95410587_95410863_95411027_95412433_95412543_95412676_95412765_95412894
transcript_117763.known	chr2	+	4775	8	FSM	ENSG00000115042.10	ENST00000233379.9	4775	8	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_1	72.9607107018733	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGTCTGGCTTGCTGT	95397378	True	NA	20	True	AATAAA	-30	NA	95402707	95416616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_95402873_95405552_95405804_95406940_95407158_95410526_95410587_95410863_95411027_95412433_95412543_95412676_95412765_95412894
transcript_117765.nic	chr2	+	1381	8	NIC	ENSG00000115042.10	novel	1366	9	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	131.709327455482	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCTTCAATAAATTCGT	95397372	True	NA	-24	True	NA	NA	NA	95402701	95413096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_95402993_95405552_95405804_95406940_95407158_95410526_95410587_95410863_95411027_95412433_95412543_95412676_95412765_95412894
transcript_117788.nnic	chr2	-	2185	10	NIC	ENSG00000174501.15	novel	1907	27	NA	NA	-1081	28010	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	6.27162924074226	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGAACAAAAATCTGGGAC	-95992894	True	NA	NA	False	AATAAA	-2	NA	95992912	95958612	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_95958664_95960638_95960668_95962351_95962425_95962518_95962548_95978121_95978190_95980647_95980786_95982255_95982363_95986750_95986925_95987091_95987207_95991511
transcript_117790.known	chr2	-	737	3	FSM	ENSG00000174501.15	ENST00000619511.1	737	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	6	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACTGTCTAAGATTTTAC	-95991813	False	NA	NA	False	AATGAA	-17	NA	95991831	95986622	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_95986925_95987091_95987207_95991511
transcript_117801.nnic	chr2	+	1816	6	FSM	ENSG00000231584.9	ENST00000691870.1	1824	6	3	5	0	0	multi-exon	FALSE	canonical	3	23	junction_1	87.6045660910435	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGCTTTCTGCTCAATC	96010511	True	NA	13	True	AGTAAA	-19	NA	96010547	96023380	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_96010733_96015108_96015326_96019200_96019701_96021124_96021234_96021367_96021466_96022673
transcript_117811.nnic	chr2	+	1316	5	FSM	ENSG00000231584.9	ENST00000687200.1	1338	5	16	6	0	0	multi-exon	FALSE	canonical	2	11	junction_2	20.2175666191557	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGCTTTCTGCTCAATC	96010511	True	NA	13	True	AGTAAA	-19	NA	96010547	96023380	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_96010733_96015108_96015326_96021124_96021234_96021367_96021466_96022673
transcript_117812.nnic	chr2	+	1593	5	FSM	ENSG00000231584.9	ENST00000690531.1	1620	5	22	5	0	0	multi-exon	FALSE	canonical	3	19	junction_1	23.1678656764062	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGCTTTCTGCTCAATC	96010517	True	NA	13	True	AGTAAA	-19	NA	96010553	96023380	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_96010733_96019200_96019701_96021124_96021234_96021367_96021466_96022673
transcript_117815.known	chr2	+	965	4	FSM	ENSG00000231584.9	ENST00000467292.7	1139	4	25	149	0	-127	multi-exon	FALSE	canonical	2	5	junction_1	24.5673676969177	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCAGCTCCCCACCGCCTC	96010514	True	NA	NA	False	NA	NA	NA	96010550	96023249	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_96010733_96021124_96021234_96021367_96021466_96022673
transcript_117819.known	chr2	-	3696	1	FSM	ENSG00000274286.2	ENST00000620793.2	3696	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTGGTGTCCTTGTTGC	-96116089	True	NA	44	True	AATAAA	-17	NA	96116571	96112875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_96112900_96116600
transcript_117820.known	chr2	-	2394	9	FSM	ENSG00000188886.4	ENST00000342380.3	2394	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.86956007081225	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCCACCTCCTGTGTGC	-96138489	False	50	-7	True	AATAAA	-20	NA	96138502	96122817	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_96124272_96129823_96129979_96130063_96130146_96132539_96132722_96133424_96133543_96133964_96134059_96135350_96135413_96137574_96137701_96138381
transcript_117821.known	chr2	-	1685	4	FSM	ENSG00000158050.5	ENST00000288943.5	1685	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	9.97775303139718	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCCAGCATCTGGTCTCA	-96144488	True	NA	-1	True	AATAAA	-24	NA	96145440	96143168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_96144038_96144153_96144374_96144760_96144883_96144966
transcript_117826.known	chr2	-	3377	8	FSM	ENSG00000084090.14	ENST00000337288.10	3377	8	0	0	0	0	multi-exon	FALSE	canonical	3	1648	junction_7	94.4887424457517	1641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGTCTTTGGACAAAT	-96192739	True	NA	-5	True	AATAAA	-26	NA	96208827	96184858	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_96186915_96187216_96187302_96192368_96192469_96193077_96193161_96193241_96193353_96194957_96195008_96195340_96195550_96208144
transcript_117827.nic	chr2	-	3022	8	NIC	ENSG00000084090.14	novel	3377	8	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	3	80	junction_7	600.826199868963	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGTCTTTGGACAAAT	-96208836	False	NA	-5	True	AATAAA	-26	NA	96208866	96184858	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_96186915_96187216_96187302_96192368_96192469_96193077_96193161_96193241_96193353_96194957_96195008_96195340_96195550_96208538
transcript_117839.known	chr2	+	2974	4	FSM	ENSG00000204685.8	ENST00000666290.1	2974	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1.69967317119759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACCACATCTCTACAAAA	96208264	False	NA	NA	False	NA	NA	NA	96208653	96243353	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_96208980_96237904_96238100_96239712_96240689_96241876
transcript_117841.known	chr2	+	3637	3	FSM	ENSG00000204685.8	ENST00000665242.2	3655	3	18	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCGCTGCTCAGCCAATA	96208017	True	NA	-32	True	NA	NA	NA	96208406	96242581	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_96208980_96237904_96238100_96239712
transcript_117842.known	chr2	+	1739	3	FSM	ENSG00000204685.8	ENST00000432267.3	1739	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTCTTCCATGACTAAT	96208555	False	NA	-9	True	AATAAA	-2	NA	96208944	96242604	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_96208980_96239712_96240689_96241876
transcript_117843.known	chr2	+	1527	3	FSM	ENSG00000204685.8	ENST00000446816.2	1565	3	9	29	9	1	multi-exon	FALSE	canonical	1	2	junction_1	1.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAATAAATTCCTTTCTTC	96208026	True	NA	-19	True	NA	NA	NA	96208415	96242594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_96208980_96240443_96240689_96241876
transcript_117844.known	chr2	+	3458	2	FSM	ENSG00000204685.8	ENST00000659123.1	3458	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAATAAATTCCTTTCTT	96208013	True	NA	-20	True	NA	NA	NA	96208402	96242593	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_96208980_96239712
transcript_117856.known	chr2	-	3099	4	FSM	ENSG00000135956.9	ENST00000432959.1	3099	4	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_3	48.8330489183981	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCACGAATAAGAATGGAAAT	-96264000	True	NA	-48	True	ATTAAA	-30	NA	96265994	96251659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_96254116_96254832_96254998_96265137_96265490_96265868
transcript_117857.known	chr2	-	6271	4	FSM	ENSG00000135956.9	ENST00000258439.8	6271	4	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	46.9491450638052	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTCTTATTTATTTTTT	-96264003	True	NA	-13	True	AATAAA	-19	NA	96265997	96248513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_96254116_96254832_96254998_96265137_96265513_96265868
transcript_117868.known	chr2	+	3968	7	FSM	ENSG00000144021.3	ENST00000488633.2	3968	7	0	0	0	0	multi-exon	FALSE	canonical	3	632	junction_5	45.7726871495315	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAACCTGAGTTTCTTAG	96257742	True	NA	56	True	AATAAA	-30	NA	96266224	96274173	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_96266490_96267320_96267470_96267624_96267737_96267835_96267925_96268456_96268659_96269267_96269356_96271110
transcript_117880.nic	chr2	+	1998	6	NIC	ENSG00000144021.3	novel	3968	7	NA	NA	28	-1793	intron_retention	FALSE	canonical	3	657	junction_3	41.2572417885636	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTACATTGTTATACCAC	96257704	True	NA	22	True	AGTAAA	-14	NA	96266186	96271556	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_96266490_96267320_96267470_96267624_96267737_96267835_96267925_96268456_96269356_96271110
transcript_117895.known	chr2	-	7194	45	FSM	ENSG00000144028.15	ENST00000323853.10	7194	45	0	0	0	0	multi-exon	TRUE	canonical	3	586	junction_38	166.881142131679	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTCCGACTGTCTTCAA	-96272633	True	NA	-1	True	AATAAA	-17	NA	96305546	96274337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_96275156_96275256_96275350_96276903_96276986_96277080_96277242_96277538_96277716_96277806_96277951_96278236_96278359_96278546_96278712_96278808_96278999_96279450_96279560_96281813_96281923_96283200_96283353_96283534_96283714_96283812_96284005_96284357_96284586_96285179_96285341_96286310_96286485_96286687_96286878_96287005_96287161_96287438_96287558_96287862_96287970_96288662_96288747_96289036_96289118_96289226_96289380_96289798_96289997_96290325_96290515_96290683_96290816_96291391_96291503_96291750_96291901_96292971_96293096_96293315_96293510_96295487_96295659_96296535_96296692_96296932_96297071_96297362_96297537_96297636_96297721_96298283_96298421_96298602_96298703_96298814_96298968_96299328_96299428_96300997_96301054_96301523_96301717_96303158_96303331_96304704_96304869_96305392
transcript_1179.known	chr1	+	1531	6	FSM	ENSG00000189409.14	ENST00000512731.5	1531	6	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	10.7591821250502	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTTCTCCTACCCCGGCT	1631016	True	NA	NA	False	NA	NA	NA	1632177	1634474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1632375_1632782_1632914_1632980_1633121_1633187_1634100_1634201_1634329_1634450
transcript_117906.nic	chr2	-	4741	30	ISM	ENSG00000144028.15	ENST00000323853.10	7194	45	-32	10406	-32	71	5prime_fragment	FALSE	canonical	3	586	junction_23	79.8360686637991	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCCCCATCGCATCGCAT	-96305555	False	NA	NA	False	AAAAAG	-6	NA	96305578	96284743	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_96285341_96286310_96286485_96286687_96286878_96287005_96287161_96287438_96287558_96287862_96287970_96288662_96288747_96289036_96289118_96289226_96289380_96289798_96289997_96290325_96290515_96290683_96290816_96291391_96291503_96291750_96291901_96292971_96293096_96293315_96293510_96295487_96295659_96296535_96296692_96296932_96297071_96297362_96297537_96297636_96297721_96298283_96298421_96298602_96298703_96298814_96298968_96299328_96299428_96300997_96301054_96301523_96301717_96303158_96303331_96304704_96304869_96305392
transcript_117933.nic	chr2	-	2229	16	ISM	ENSG00000144028.15	ENST00000323853.10	7194	45	-32	18706	-32	-7827	5prime_fragment	FALSE	canonical	3	586	junction_9	54.3092380109805	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATCAAGCGTTTCCAGAT	-96305555	False	NA	NA	False	NA	NA	NA	96305578	96293043	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_96293096_96293315_96293510_96295487_96295659_96296535_96296692_96296932_96297071_96297362_96297537_96297636_96297721_96298283_96298421_96298602_96298703_96298814_96298968_96299328_96299428_96300997_96301054_96301523_96301717_96303158_96303331_96304704_96304869_96305392
transcript_117938.known	chr2	+	2064	3	FSM	ENSG00000198885.10	ENST00000439118.3	2064	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	3.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGTGTTTACTTTTCAG	96324384	True	NA	33	True	ATTAAA	-39	NA	96325316	96328353	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_96325566_96325746_96325850_96326641
transcript_117944.known	chr2	+	1947	2	FSM	ENSG00000198885.10	ENST00000536814.1	1947	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGTGTTTACTTTTCAG	96324398	True	NA	33	True	ATTAAA	-39	NA	96325330	96328353	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_96325566_96326641
transcript_117948.known	chr2	+	6030	18	FSM	ENSG00000121152.10	ENST00000240423.9	6030	18	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	33.730562774017	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATGTTGCCTTTTTTTTT	96331721	True	NA	5	True	AATAAA	-17	NA	96335765	96377091	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_96335849_96341641_96341895_96342049_96342141_96342755_96342849_96343165_96343305_96344104_96344230_96351830_96352021_96353305_96353398_96354182_96354389_96359044_96359194_96360142_96360250_96360587_96360711_96364480_96364592_96365875_96366059_96367256_96367374_96368971_96369064_96369424_96369501_96373291
transcript_117952.nic	chr2	+	2757	18	NIC	ENSG00000121152.10	novel	2952	18	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	105	junction_1	38.4798513762426	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTCTTAATAATAGAAC	96331685	True	NA	-13	True	TATAAA	-23	NA	96335729	96373815	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_96335849_96341674_96341895_96342049_96342141_96342755_96342849_96343165_96343305_96344104_96344230_96351830_96352021_96353305_96353398_96354182_96354389_96359044_96359194_96360142_96360250_96360587_96360711_96364480_96364592_96365875_96366059_96367256_96367374_96368971_96369064_96369424_96369501_96373291
transcript_117954.nic	chr2	+	2704	18	NIC	ENSG00000121152.10	novel	2952	18	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	55.894797375985	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTCTTAATAATAGAAC	96331699	True	NA	-13	True	TATAAA	-23	NA	96335743	96373815	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_96335849_96341713_96341895_96342049_96342141_96342755_96342849_96343165_96343305_96344104_96344230_96351830_96352021_96353305_96353398_96354182_96354389_96359044_96359194_96360142_96360250_96360587_96360711_96364480_96364592_96365875_96366059_96367256_96367374_96368971_96369064_96369424_96369501_96373291
transcript_117956.known	chr2	+	2952	18	FSM	ENSG00000121152.10	ENST00000455200.5	2952	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	60.2262746004527	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTCTTAATAATAGAAC	96331773	True	NA	-13	True	TATAAA	-23	NA	96335817	96373815	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_96335849_96341391_96341895_96342049_96342141_96342755_96342849_96343165_96343305_96344104_96344230_96351830_96352021_96353305_96353398_96354182_96354389_96359044_96359194_96360142_96360250_96360587_96360711_96364480_96364592_96365875_96366059_96367256_96367374_96368971_96369064_96369424_96369501_96373291
transcript_11796.known	chr1	+	3257	21	FSM	ENSG00000143093.15	ENST00000369795.8	3257	21	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_16	21.1869653324869	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCGTTGGCTTGTCTACA	110026934	True	NA	8	True	ATTAAA	-16	NA	110034623	110054641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_110034818_110037890_110037961_110038682_110038758_110039171_110039307_110039394_110039516_110040634_110040704_110041535_110041643_110041733_110041862_110043087_110043271_110043638_110043857_110044839_110044906_110045014_110045079_110046679_110046752_110047541_110047617_110047771_110047870_110049111_110049239_110049459_110049561_110050342_110050410_110050955_110051061_110051682_110051888_110053664
transcript_117962.nic	chr2	+	1488	11	ISM	ENSG00000121152.10	ENST00000240423.9	6030	18	-36	16918	-36	721	5prime_fragment	FALSE	canonical	3	131	junction_1	35.2170413294473	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGTACAAAAAAAGATT	96331685	True	NA	NA	False	AAAACA	-5	NA	96335729	96360173	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_96335849_96341641_96341895_96342049_96342141_96342755_96342849_96343165_96343305_96344104_96344230_96351830_96352021_96353305_96353398_96354182_96354389_96359044_96359194_96360142
transcript_117963.nic	chr2	+	1455	11	ISM	ENSG00000121152.10	ENST00000435975.5	1852	14	-71	5860	-36	721	5prime_fragment	FALSE	canonical	3	105	junction_1	41.8497311819323	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGTACAAAAAAAGATT	96331685	True	NA	NA	False	AAAACA	-5	NA	96335729	96360173	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_96335849_96341674_96341895_96342049_96342141_96342755_96342849_96343165_96343305_96344104_96344230_96351830_96352021_96353305_96353398_96354182_96354389_96359044_96359194_96360142
transcript_117964.nic	chr2	+	1457	10	ISM	ENSG00000121152.10	ENST00000240423.9	6030	18	-36	17898	-36	-259	5prime_fragment	FALSE	canonical	3	131	junction_1	37.1177638747504	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTAATTCTAGGTGGAA	96331685	True	NA	NA	False	NA	NA	NA	96335729	96359193	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_96335849_96341641_96341895_96342049_96342141_96342755_96342849_96343165_96343305_96344104_96344230_96351830_96352021_96353305_96353398_96354182_96354389_96359044
transcript_117967.nic	chr2	+	1424	10	ISM	ENSG00000121152.10	ENST00000435975.5	1852	14	-71	6840	-36	-259	5prime_fragment	FALSE	canonical	3	105	junction_1	44.1120906692244	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTAATTCTAGGTGGAA	96331685	True	NA	NA	False	NA	NA	NA	96335729	96359193	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_96335849_96341674_96341895_96342049_96342141_96342755_96342849_96343165_96343305_96344104_96344230_96351830_96352021_96353305_96353398_96354182_96354389_96359044
transcript_117968.known	chr2	+	1573	10	FSM	ENSG00000121152.10	ENST00000477409.1	1573	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	68.8123230422367	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTATCCACATGACTTCAC	96331756	True	NA	NA	False	NA	NA	NA	96335800	96359452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_96335849_96341713_96341895_96342049_96342141_96342755_96342849_96343165_96343305_96344104_96344230_96351830_96352021_96353305_96353398_96354182_96354389_96359044
transcript_117982.nnic	chr2	+	2371	7	NNC	ENSG00000196843.17	novel	2181	7	NA	NA	-26	0	intron_retention	FALSE	canonical	2	5	junction_4	22.9128784747792	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACGTAGCCCTGAGGTGT	96536018	True	NA	15	True	AATAAA	-17	NA	96536716	96552630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_96536831_96547401_96547518_96549320_96549460_96549752_96549806_96550028_96550286_96550573_96550734_96551098
transcript_117983.known	chr2	+	2181	7	FSM	ENSG00000196843.17	ENST00000357485.8	2181	7	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	8.03464719546263	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTAGCCCTGAGGTGTGTGT	96536053	True	NA	19	True	AATAAA	-21	NA	96536751	96552634	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_96536831_96547401_96547518_96549320_96549460_96549752_96549806_96550187_96550286_96550573_96550734_96551098
transcript_117986.nic	chr2	+	2606	6	NIC	ENSG00000196843.17	novel	2181	7	NA	NA	-38	0	intron_retention	FALSE	canonical	3	53	junction_3	8.77724330299668	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACGTAGCCCTGAGGTGT	96536006	True	NA	15	True	AATAAA	-17	NA	96536704	96552630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_96536831_96547401_96547518_96549320_96549460_96549752_96550286_96550573_96550734_96551098
transcript_117988.known	chr2	+	2038	6	FSM	ENSG00000196843.17	ENST00000412735.5	2038	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	18.7893586904929	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACGTAGCCCTGAGGTGT	96536053	True	NA	15	True	AATAAA	-17	NA	96536751	96552630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_96536831_96547401_96547518_96549752_96549806_96550187_96550286_96550573_96550734_96551098
transcript_11799.nic	chr1	+	3512	20	NIC	ENSG00000143093.15	novel	3257	21	NA	NA	-36	0	intron_retention	TRUE	canonical	3	218	junction_9	18.6768703150325	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCCCGTTGGCTTGTCTA	110026898	True	NA	6	True	ATTAAA	-14	NA	110034587	110054639	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_110034818_110037890_110037961_110038682_110038758_110039171_110039307_110039394_110039516_110040634_110040704_110041535_110041643_110041733_110041862_110043087_110043271_110043638_110043857_110044839_110044906_110045014_110045079_110046679_110046752_110047541_110047617_110047771_110047870_110049111_110049561_110050342_110050410_110050955_110051061_110051682_110051888_110053664
transcript_117991.known	chr2	+	940	5	FSM	ENSG00000196843.17	ENST00000467498.5	940	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	20.9105236663265	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAACAGCACAGAACAGCAG	96536068	True	NA	NA	False	NA	NA	NA	96536766	96551165	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_96536831_96547401_96547518_96549752_96550286_96550573_96550734_96551098
transcript_118.known	SIRV3	-	796	3	FSM	SIRV3C	SIRV309	796	3	0	0	0	0	multi-exon	FALSE	canonical	3	1533	junction_2	30	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTCAAATATCTGTGTC	NA	False	NA	NA	False	CATAAA	-21	NA	9943	8797	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV3_-_8976_9189_9299_9434
transcript_118001.known	chr2	-	5156	21	FSM	ENSG00000114982.19	ENST00000431828.6	5156	21	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_20	23.3861069868416	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGGATTGCTTCAGCTT	-96635780	True	NA	-15	True	ATTAAA	-15	NA	96638312	96593171	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_96595632_96601642_96601777_96602115_96602339_96602752_96602863_96604249_96604381_96604778_96604864_96605319_96605512_96608507_96608665_96608863_96609065_96609498_96609563_96610725_96610884_96611063_96611139_96612281_96612354_96612461_96612564_96612817_96612935_96613487_96613620_96619358_96619545_96619671_96619763_96631311_96631483_96636920_96637186_96638282
transcript_118003.known	chr2	-	5253	21	FSM	ENSG00000114982.19	ENST00000354204.10	5253	21	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_19	26.8735929864244	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATTGCTTCAGCTTCT	-96635814	True	NA	-13	True	ATTAAA	-17	NA	96638346	96593169	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_96595632_96601642_96601777_96602115_96602339_96602752_96602863_96604249_96604381_96604778_96604864_96605319_96605512_96608507_96608665_96608863_96609065_96609498_96609563_96610725_96610884_96611063_96611139_96612281_96612354_96612461_96612564_96612817_96612935_96613487_96613620_96619358_96619545_96619671_96619763_96631311_96631544_96636920_96637186_96638282
transcript_118007.known	chr2	-	2717	20	FSM	ENSG00000114982.19	ENST00000444759.5	2717	20	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_17	34.5972474206529	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGTTGGTGATGGCTGC	-96635846	True	NA	NA	False	NA	NA	NA	96638378	96595585	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_96595632_96601642_96601777_96602115_96602339_96602752_96602863_96604249_96604381_96604778_96604864_96605319_96605512_96608507_96608665_96608863_96609065_96609498_96609563_96610725_96610884_96611063_96611139_96612281_96612354_96612461_96612564_96612817_96612935_96613487_96613620_96619358_96619545_96631311_96631483_96636920_96637186_96638282
transcript_118008.nic	chr2	-	4986	20	NIC	ENSG00000114982.19	novel	5028	21	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	31.1263175693715	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTTGGATTGCTTCAGC	-96635835	True	NA	-17	True	ATTAAA	-13	NA	96638367	96593173	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_96595632_96601642_96601777_96602752_96602863_96604249_96604381_96604778_96604864_96605319_96605512_96608507_96608665_96608863_96609065_96609498_96609563_96610725_96610884_96611063_96611139_96612281_96612354_96612461_96612564_96612817_96612935_96613487_96613620_96619358_96619545_96619671_96619763_96631311_96631483_96636920_96637186_96638282
transcript_118017.known	chr2	-	1448	12	FSM	ENSG00000114982.19	ENST00000452268.5	1448	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	53.4251619921203	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTGGATTCTCCCAGAG	-96635799	True	NA	NA	False	NA	NA	NA	96638331	96610725	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_96610884_96611063_96611139_96612281_96612354_96612461_96612564_96612817_96612935_96613487_96613620_96619358_96619545_96619671_96619763_96631311_96631483_96634148_96634179_96636920_96637186_96638282
transcript_118021.known	chr2	-	2020	9	FSM	ENSG00000114988.12	ENST00000377079.8	2020	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	84.0862652280383	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTTTTGTAGTTACGAT	-96736714	True	NA	NA	False	NA	NA	NA	96740064	96706339	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_96707399_96707713_96707834_96711655_96711771_96711863_96712026_96713106_96713140_96733518_96733602_96734408_96734527_96737948_96738068_96739853
transcript_118022.known	chr2	-	2410	9	FSM	ENSG00000114988.12	ENST00000434524.5	2410	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	86.6238275533932	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCTGTAGCCTAAATGAAA	-96736691	True	NA	-50	True	NA	NA	NA	96740041	96705974	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_96707399_96707713_96707834_96711655_96711771_96711863_96712026_96733518_96733602_96734408_96734527_96737136_96737218_96737948_96738068_96739853
transcript_118025.known	chr2	-	2398	8	FSM	ENSG00000114988.12	ENST00000264963.9	2398	8	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_6	17.1106840951518	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGCTTCTGACTGTGTT	-96736714	True	NA	-4	True	AATGAA	-28	NA	96740064	96705928	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_96707399_96707713_96707834_96711655_96711771_96711863_96712026_96733518_96733602_96734408_96734527_96737948_96738068_96739853
transcript_118028.known	chr2	-	1163	7	FSM	ENSG00000114988.12	ENST00000434865.5	1163	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_6	71.0797673978561	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAATGCTGCTGTGATGTG	-96736713	True	NA	NA	False	NA	NA	NA	96740063	96707043	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_96707399_96707713_96707834_96711655_96711771_96711863_96712026_96733518_96733602_96734408_96734527_96739853
transcript_118031.known	chr2	-	1008	6	FSM	ENSG00000114988.12	ENST00000440610.5	1008	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	94.1522171804785	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAGGGACCCCGCATTCC	-96736714	True	NA	NA	False	NA	NA	NA	96740064	96707116	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_96707399_96707713_96707834_96711655_96711771_96711863_96712026_96734408_96734527_96739853
transcript_118033.known	chr2	+	4783	7	FSM	ENSG00000158158.12	ENST00000377075.3	4783	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	12.0887918705257	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGGTGAATCTACAACTT	96760137	True	NA	14	True	AATAAA	-19	NA	96760901	96811874	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_96762402_96797011_96797156_96797512_96797648_96799056_96799227_96799551_96799649_96808560_96808743_96809319
transcript_118043.nic	chr2	-	3137	12	NIC	ENSG00000213337.9	novel	4965	9	NA	NA	1	-1304	intron_retention	FALSE	canonical	3	21	junction_1	133.294491587625	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCTAGCCGTCTTTCCT	-96855011	True	NA	NA	False	ATTAAA	-15	NA	96858015	96837914	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_96839645_96839726_96839826_96839996_96840096_96840231_96840331_96840415_96840515_96840786_96840913_96842059_96842186_96842364_96842512_96848268_96848445_96853400_96853605_96854337_96854442_96857887
transcript_118055.known	chr2	+	4900	8	FSM	ENSG00000168763.16	ENST00000305510.4	4900	8	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_2	30.5286750449475	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTTTCTGTGTCAGGATT	96815669	True	NA	16	True	AATAAA	-22	NA	96816267	96835382	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_96817503_96825057_96825202_96826832_96826983_96827730_96827901_96828098_96828196_96828566_96828701_96828995_96829135_96832551
transcript_118057.known	chr2	+	3308	7	FSM	ENSG00000168763.16	ENST00000377060.7	3308	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	96.9788063903082	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGGTTTTTTGTTTGTTT	96815646	True	NA	47	True	TTTAAA	-16	NA	96816244	96833911	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_96817503_96826832_96826983_96827730_96827901_96828098_96828196_96828566_96828701_96828995_96829135_96832551
transcript_118061.nic	chr2	-	802	5	ISM	ENSG00000213337.9	ENST00000443120.5	4965	9	-68	5778	-66	5601	5prime_fragment	FALSE	canonical	3	34	junction_1	128.923184493713	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGGAAGAAGAGAAGAAGAA	-96858067	False	NA	53	True	NA	NA	NA	96858082	96842388	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_96842512_96848268_96848445_96853400_96853605_96854337_96854442_96857887
transcript_118064.known	chr2	-	892	4	FSM	ENSG00000213337.9	ENST00000393537.5	892	4	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_3	24.5266295188629	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAACTATGTAAGTATTAG	-96855012	True	NA	-5	True	ATTAAA	-19	NA	96858016	96847989	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_96848445_96853400_96853605_96854337_96854442_96857887
transcript_118073.known	chr2	-	3652	15	FSM	ENSG00000168758.11	ENST00000305476.10	3652	15	0	0	0	0	multi-exon	TRUE	canonical	3	78	junction_14	64.3714111343582	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTGGGCTAAAGCCTT	-96868972	True	NA	2	True	AATAAA	-37	NA	96870080	96859717	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_96861456_96861578_96861650_96861736_96861895_96863681_96863795_96863925_96864149_96864237_96864383_96864704_96864881_96864963_96865116_96865203_96865321_96865440_96865538_96865665_96865765_96865866_96865930_96866282_96866432_96867777_96867924_96869875
transcript_118074.nic	chr2	-	3615	15	NIC	ENSG00000168758.11	novel	3652	15	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_14	77.7780725617996	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGATTGCTCTGATGGGG	-96868571	False	NA	-22	True	AATAAA	-13	NA	96868604	96859741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_96861456_96861578_96861650_96861736_96861895_96863681_96863795_96863925_96864149_96864237_96864383_96864704_96864881_96864963_96865116_96865203_96865321_96865440_96865538_96865665_96865765_96865866_96865930_96866282_96866432_96867777_96867927_96868415
transcript_118075.nnic	chr2	-	3730	15	NNC	ENSG00000168758.11	novel	3652	15	NA	NA	590	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_14	69.9711310732753	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGATTGCTCTGATGGGG	-96869457	False	NA	-22	True	AATAAA	-13	NA	96869490	96859741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_96861456_96861578_96861650_96861736_96861895_96863681_96863795_96863925_96864149_96864237_96864383_96864704_96864881_96864963_96865116_96865203_96865321_96865440_96865538_96865665_96865765_96865866_96865930_96866282_96866432_96867777_96867927_96869186
transcript_11808.nnic	chr1	+	3063	19	NIC	ENSG00000143093.15	novel	3257	21	NA	NA	-36	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_15	57.7917718095655	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCCCGTTGGCTTGTCTA	110026898	True	NA	6	True	ATTAAA	-14	NA	110034587	110054639	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_110034818_110037890_110037961_110038682_110038758_110039171_110039307_110039394_110039516_110040634_110040704_110041535_110041643_110041733_110041862_110043087_110043271_110043638_110043857_110044839_110044906_110045014_110045079_110046679_110046752_110047541_110047617_110047771_110047870_110050342_110050410_110050955_110051061_110051682_110051888_110053664
transcript_118088.known	chr2	-	1431	9	FSM	ENSG00000144199.12	ENST00000414820.6	1431	9	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_8	70.9831626162148	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGCTTGTGCTGTTTGT	-97093019	True	NA	-24	True	AATAAA	-21	NA	97094882	97083582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_97083818_97083947_97084036_97084168_97084278_97085698_97085862_97086138_97086199_97090108_97090326_97091461_97091713_97091862_97091989_97094700
transcript_118090.known	chr2	-	1305	8	FSM	ENSG00000144199.12	ENST00000272610.3	1305	8	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_7	105.762151325799	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGCTTGTGCTGTTTGT	-97093019	True	NA	-24	True	AATAAA	-21	NA	97094882	97083582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_97083818_97083947_97084036_97084168_97084278_97085698_97085862_97086138_97086199_97090108_97090326_97091461_97091713_97094700
transcript_118096.known	chr2	+	986	3	FSM	ENSG00000135976.21	ENST00000452478.2	986	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	8	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAATCAGTGTGAAGTGA	97113307	True	NA	NA	False	ACTAAA	-10	NA	97113551	97118829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_97113937_97118063_97118179_97118343
transcript_118104.known	chr2	-	1169	15	FSM	ENSG00000196912.13	ENST00000419390.2	1169	15	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_12	7.68911236617022	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGGAGAAATATCTAGGA	-97589757	False	NA	NA	False	AATATA	-15	NA	97589815	97551311	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_97551362_97551451_97551481_97553167_97553241_97553342_97553372_97555059_97555133_97555225_97555255_97556936_97557010_97557103_97557133_97558798_97558872_97558965_97558995_97560664_97560738_97560831_97560861_97584943_97585118_97585283_97585399_97589524
transcript_118111.nic	chr2	-	1500	3	ISM	ENSG00000196912.13	ENST00000419390.2	1169	15	-490	33202	-428	-33202	5prime_fragment	FALSE	canonical	3	34	junction_1	1.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTTGTATGTGAAGGT	-97589678	True	NA	NA	False	AATAAA	-22	NA	97590305	97584513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_97585118_97585283_97585399_97589524
transcript_118114.known	chr2	+	613	5	FSM	ENSG00000135940.7	ENST00000464949.5	613	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	3461.87004197154	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGATGGCTGGTCTTATTT	97594306	True	NA	36	True	AGTAAA	-30	NA	97646096	97648191	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_97646190_97646516_97646667_97647066_97647141_97647343_97647444_97647995
transcript_118115.known	chr2	+	690	4	FSM	ENSG00000135940.7	ENST00000258424.3	690	4	0	0	0	0	multi-exon	FALSE	canonical	3	6550	junction_3	306.31465303943	2554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAAGGGGCGGGCTGAGG	97594271	True	NA	NA	False	AATAGA	-42	NA	97646061	97648383	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_97646190_97647066_97647141_97647343_97647444_97647995
transcript_118120.known	chr2	-	2204	11	FSM	ENSG00000115073.8	ENST00000289228.7	2204	11	0	0	0	0	multi-exon	TRUE	canonical	3	102	junction_6	20.2829978060444	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTGCTATCGTTTGTT	-97662152	True	NA	0	True	NA	NA	NA	97664044	97655938	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_97656961_97657151_97657193_97657447_97657510_97657942_97658118_97658223_97658317_97658426_97658644_97658878_97659004_97659351_97659478_97660570_97660647_97661881_97661947_97663842
transcript_118127.nic	chr2	-	2459	10	NIC	ENSG00000115073.8	novel	2204	11	NA	NA	-20	0	intron_retention	FALSE	canonical	3	136	junction_4	14.3913554299486	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTGCTATCGTTTGTT	-97662172	True	NA	0	True	NA	NA	NA	97664064	97655938	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_97656961_97657151_97657193_97657447_97657510_97657942_97658118_97658223_97658317_97658426_97659004_97659351_97659478_97660570_97660647_97661881_97661947_97663842
transcript_118138.nic	chr2	-	2617	9	NIC	ENSG00000115073.8	novel	2204	11	NA	NA	-72	0	intron_retention	FALSE	canonical	3	142	junction_6	14.0356688476182	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTGCTATCGTTTGTT	NA	False	NA	0	True	NA	NA	NA	97664116	97655938	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_97656961_97657151_97657193_97657447_97657510_97657942_97658317_97658426_97659004_97659351_97659478_97660570_97660647_97661881_97661947_97663842
transcript_118168.known	chr2	-	6701	41	FSM	ENSG00000075568.17	ENST00000186436.10	6701	41	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_20	9.19116423528597	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGTTTTGTGGTTTTTT	-97993293	True	NA	-2	True	AATAAA	-18	NA	97995948	97756335	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_97757384_97758892_97759054_97759651_97759750_97760592_97760690_97760792_97760915_97762034_97762201_97766113_97766264_97766477_97766603_97772296_97772425_97775842_97776019_97792385_97792985_97793394_97793554_97794929_97795116_97796217_97796405_97796843_97796987_97797364_97797517_97801894_97801962_97802427_97802538_97802651_97802791_97805087_97805206_97805375_97805452_97805550_97805704_97809687_97809775_97811127_97811233_97812420_97812556_97812638_97812750_97813970_97814142_97814234_97814389_97815198_97815308_97818612_97818722_97833364_97833427_97834620_97834678_97834774_97834926_97837076_97837158_97841814_97841938_97844144_97844262_97859303_97859428_97888051_97888121_97908657_97908699_97927425_97927488_97995475
transcript_118171.nic	chr2	-	4679	33	ISM	ENSG00000075568.17	ENST00000186436.10	6701	41	11	16005	11	-12658	5prime_fragment	FALSE	canonical	3	52	junction_12	8.99109802804974	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTCTTAAATATTAAGAAAGA	-97993282	True	NA	NA	False	AAAAAG	-8	NA	97995937	97772340	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_97772425_97775842_97776019_97792385_97792985_97793394_97793554_97794929_97795116_97796217_97796405_97796843_97796987_97797364_97797517_97801894_97801962_97802427_97802538_97802651_97802791_97805087_97805206_97805375_97805452_97805550_97805704_97809687_97809775_97811127_97811233_97812420_97812556_97812638_97812750_97813970_97814142_97814234_97814389_97815198_97815308_97818612_97818722_97833364_97833427_97834620_97834678_97834774_97834926_97837076_97837158_97841814_97841938_97844144_97844262_97859303_97859428_97888051_97888121_97908657_97908699_97927425_97927488_97995475
transcript_118177.known	chr2	+	3231	26	FSM	ENSG00000040933.16	ENST00000409540.7	3231	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_25	45.0540297864686	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTACCTAACTGGACAGAAG	98441206	False	NA	NA	False	AAGAAA	-32	NA	98444949	98581821	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_98445086_98518963_98519026_98519945_98520155_98520686_98520732_98533376_98533496_98535728_98535846_98536128_98536209_98537862_98537975_98538890_98538982_98539527_98539676_98543876_98544008_98545968_98546074_98546585_98546695_98548954_98548970_98552785_98552970_98554270_98554490_98555552_98555692_98559462_98559496_98563464_98563638_98564639_98564764_98565639_98565767_98566028_98566170_98568570_98568669_98572814_98572928_98576988_98577144_98581575
transcript_118178.known	chr2	+	9996	26	FSM	ENSG00000040933.16	ENST00000409016.8	9996	26	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_13	37.1269390066027	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCATTACTGAGAATGATG	98441110	True	NA	NA	False	ATTAAA	-12	NA	98444853	98594390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_98445086_98518963_98519026_98519945_98520155_98520686_98520732_98533376_98533496_98535728_98535846_98536128_98536209_98537862_98537975_98538890_98538982_98539527_98539676_98543876_98544008_98545968_98546074_98546585_98546695_98548954_98548970_98552785_98552970_98554270_98554490_98555552_98555692_98559462_98559496_98563464_98563638_98564639_98564764_98565639_98565767_98566028_98566170_98568570_98568669_98572814_98572928_98576988_98577144_98587475
transcript_118185.known	chr2	+	6752	26	FSM	ENSG00000040933.16	ENST00000074304.9	6752	26	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_13	42.0368219540916	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTGCACACTTTTTAAC	98441114	True	NA	NA	False	AATATA	-21	NA	98444857	98591033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_98445086_98518963_98519026_98519945_98520155_98520686_98520732_98533376_98533496_98535728_98535846_98536128_98536209_98537862_98537975_98538890_98538982_98539527_98539676_98543876_98544008_98545968_98546074_98546585_98546695_98548954_98548970_98552785_98552970_98554270_98554490_98555552_98555809_98559462_98559496_98563464_98563638_98564639_98564764_98565639_98565767_98566028_98566170_98568570_98568669_98572814_98572928_98576988_98577144_98587475
transcript_118191.known	chr2	+	10096	25	FSM	ENSG00000040933.16	ENST00000409851.8	10096	25	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_16	26.5513130037334	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATTACTGAGAATGATGAT	98441114	True	NA	NA	False	ATTAAA	-14	NA	98444857	98594392	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_98445086_98518963_98519026_98519945_98520155_98520686_98520732_98533376_98533496_98535728_98535846_98536128_98536209_98537862_98537975_98538890_98538982_98539527_98539676_98543876_98544008_98545968_98546074_98546585_98546695_98552785_98552970_98554270_98554490_98555552_98555809_98559462_98559496_98563464_98563638_98564639_98564764_98565639_98565767_98566028_98566170_98568570_98568669_98572814_98572928_98576988_98577144_98587475
transcript_118208.nic	chr2	+	1616	4	ISM	ENSG00000040933.16	ENST00000409540.7	3231	26	-129	60055	-33	0	5prime_fragment	FALSE	canonical	3	136	junction_3	5.09901951359278	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAAAAAAAAC	98441077	True	NA	NA	False	NA	NA	NA	98444820	98521766	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_98445086_98518963_98519026_98519945_98520155_98520686
transcript_118211.known	chr2	-	1770	3	FSM	ENSG00000183513.9	ENST00000328709.8	1770	3	0	0	0	0	multi-exon	FALSE	canonical	3	484	junction_2	58.5	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACCAATTCAGTGTTTTT	-98603060	True	NA	NA	False	AATACA	-25	NA	98608512	98599313	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_98600794_98604107_98604192_98608306
transcript_118217.nic	chr2	+	1218	6	NIC	ENSG00000115446.12	novel	1133	6	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_5	212.352537069845	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGTGTTCACTCTAAT	98599451	True	NA	NA	False	AATAAA	-17	NA	98608525	98618515	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_98608727_98609755_98610040_98610774_98610896_98616206_98616347_98616431_98616534_98618145
transcript_118218.known	chr2	+	1133	6	FSM	ENSG00000115446.12	ENST00000357765.7	1133	6	0	0	0	0	multi-exon	FALSE	canonical	3	481	junction_4	40.293920136914	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGTGTTCACTCTAAT	98599514	True	NA	NA	False	AATAAA	-17	NA	98608588	98618515	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_98608727_98609755_98610040_98610774_98610896_98616206_98616347_98616431_98616534_98618167
transcript_11822.known	chr1	-	1955	4	FSM	ENSG00000156150.9	ENST00000647563.2	1955	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGTGACTGTCTATCCCC	-110070661	True	NA	NA	False	AATAAA	-20	NA	110070672	110059869	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_110061042_110061434_110061564_110064586_110064904_110070335
transcript_118220.nnic	chr2	+	1296	6	NIC	ENSG00000115446.12	novel	1133	6	NA	NA	-40	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	218.510045535669	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGTGTTCACTCTAAT	98599464	True	NA	NA	False	AATAAA	-17	NA	98608538	98618515	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_98608727_98609642_98610040_98610774_98610896_98616206_98616347_98616431_98616534_98618167
transcript_118229.known	chr2	+	2172	5	FSM	ENSG00000115446.12	ENST00000409975.5	2172	5	0	0	0	0	multi-exon	FALSE	canonical	3	481	junction_3	44.8274469493858	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGTGTTCACTCTAAT	98599504	True	NA	NA	False	AATAAA	-17	NA	98608578	98618515	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_98610040_98610774_98610896_98616206_98616347_98616431_98616534_98618167
transcript_11823.known	chr1	+	4216	1	FSM	ENSG00000258634.3	ENST00000554749.1	4216	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGCTTTCCAGGGATAT	110058329	False	NA	NA	False	AATAAA	-19	NA	110058339	110062555	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_110058300_110062600
transcript_118230.known	chr2	-	8388	16	FSM	ENSG00000071073.13	ENST00000393487.6	8388	16	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_10	5.38722769355651	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTAGTATTTTATTATTA	-98730848	True	NA	0	True	AATAAA	-17	NA	98731132	98619105	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_98625593_98625722_98625836_98635221_98635289_98636516_98636596_98639807_98640002_98640120_98640229_98643922_98644054_98645427_98645543_98655444_98655521_98656351_98656466_98658217_98658265_98663045_98663180_98675034_98675176_98678303_98678472_98726238_98726568_98731047
transcript_118234.nic	chr2	-	1117	8	NIC	ENSG00000135951.16	novel	3160	17	NA	NA	-10	4066	combination_of_known_junctions	TRUE	canonical	3	8	junction_4	2.91372543633873	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCTTTTGGCTATAAACA	-99141009	False	NA	NA	False	AAAAAG	-5	NA	99141190	99105336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_99105437_99105526_99105698_99108832_99108992_99109388_99109557_99110849_99110916_99117543_99117760_99127047_99127177_99141082
transcript_11824.known	chr1	+	18750	4	FSM	ENSG00000116396.15	ENST00000369787.7	18750	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	3.85861230093008	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGGCCAACTACATCACT	110211426	False	NA	NA	False	NA	NA	NA	110211472	110249124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_110212178_110222963_110223901_110225974_110226179_110232220
transcript_118240.known	chr2	-	283	2	FSM	ENSG00000135951.16	ENST00000465216.1	283	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTCTCTTTTTCTTA	-99154754	True	NA	0	True	AATAAA	-16	NA	99154890	99148263	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_99148349_99154692
transcript_118241.known	chr2	+	1058	5	FSM	ENSG00000273045.7	ENST00000409684.2	1058	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	12.3970762682174	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGATTTCTCTGGTATTA	99141292	True	NA	NA	False	AAAAAG	-16	NA	99141749	99151047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_99141938_99142284_99142402_99147026_99147123_99147401_99147494_99150482
transcript_118242.known	chr2	+	1627	4	FSM	ENSG00000273045.7	ENST00000650052.2	1627	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	6.34209919681348	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCACATTTTAAATCGTGC	99141249	True	NA	26	True	AATAAA	-38	NA	99141706	99151669	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_99141938_99142284_99142402_99147401_99147494_99150482
transcript_11825.known	chr1	+	4139	4	FSM	ENSG00000116396.15	ENST00000438661.3	4139	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	16.0485374896143	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCTGCCTCTGCCTCTCC	110209977	True	NA	24	True	AATAAA	-36	NA	110210313	110234044	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_110212178_110222963_110223901_110225974_110226179_110232910
transcript_118251.nnic	chr2	+	1020	7	NNC	ENSG00000185414.20	novel	4435	6	NA	NA	-76	12	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_6	129.037462260642	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAGTTTTAATTCCATAG	99175087	True	NA	13	True	AATAAA	-16	NA	99181075	99197435	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_99181250_99186176_99186255_99188176_99188258_99194750_99194898_99195115_99195190_99195572_99195757_99197153
transcript_118256.known	chr2	-	939	7	FSM	ENSG00000158411.11	ENST00000289359.6	939	7	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_4	26.9485105752103	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGGATCCATCATTCAG	-99179133	True	NA	-14	True	AATAAA	-19	NA	99181058	99169262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_99169471_99169549_99169611_99170536_99170653_99171342_99171430_99171509_99171647_99173914_99174017_99180830
transcript_118258.known	chr2	-	1083	7	FSM	ENSG00000158411.11	ENST00000413710.2	1083	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	132.091403538947	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGGATCCATCATTCAG	-99179109	True	NA	-14	True	AATAAA	-19	NA	99181034	99169262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_99169611_99170536_99170653_99171342_99171430_99171509_99171647_99173413_99173503_99173914_99174017_99180830
transcript_118259.known	chr2	+	567	6	FSM	ENSG00000185414.20	ENST00000473743.5	567	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	190.772534710844	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGATAAGGTTTGTTGT	99175163	True	NA	NA	False	NA	NA	NA	99181151	99195178	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_99181250_99186176_99186255_99186918_99187019_99188176_99188258_99194750_99194898_99195115
transcript_118260.known	chr2	+	4435	6	FSM	ENSG00000185414.20	ENST00000338148.8	4435	6	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_2	49.847768254958	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTAGTTTTCCGTATTACC	99175195	True	NA	23	True	AATAAA	-20	NA	99181183	99199561	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_99181250_99186176_99186255_99188176_99188258_99194750_99194898_99195115_99195190_99195572
transcript_118264.known	chr2	-	662	6	FSM	ENSG00000158411.11	ENST00000409107.1	662	6	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_3	90.3026023988235	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGATTTAAGACCATGTC	-99179125	True	NA	1	True	NA	NA	NA	99181050	99169444	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_99169471_99169549_99169611_99170536_99170653_99171509_99171647_99173914_99174017_99180830
transcript_118267.nic	chr2	+	663	5	ISM	ENSG00000185414.20	ENST00000338148.8	4435	6	-108	4263	-76	120	5prime_fragment	FALSE	canonical	3	318	junction_2	50.2810849127184	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTTTGTTTTTTTTTA	99175087	True	NA	NA	False	ACTAAA	-2	NA	99181075	99195298	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_99181250_99186176_99186255_99188176_99188258_99194750_99194898_99195115
transcript_118272.known	chr2	+	803	4	FSM	ENSG00000144182.17	ENST00000415142.1	803	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	12.5521135891752	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCATGATATGGGTAATAT	99154186	True	NA	NA	False	TATAAA	-35	NA	99155073	99162275	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_99155369_99155481_99155545_99156300_99156427_99161956
transcript_118273.known	chr2	+	562	4	FSM	ENSG00000185414.20	ENST00000409145.5	562	4	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_2	43.4587927428578	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGCTTTGTTGTTGTTGT	99175197	True	NA	NA	False	NA	NA	NA	99181185	99195089	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_99181250_99186176_99186255_99188176_99188258_99194750
transcript_118276.known	chr2	-	3270	4	FSM	ENSG00000158411.11	ENST00000464685.1	3270	4	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_2	29.0287214094363	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGGATCCATCATTCAG	-99180708	False	NA	-14	True	AATAAA	-19	NA	99180962	99169262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_99169611_99170536_99170653_99171342_99174017_99180830
transcript_118278.known	chr2	+	1424	3	FSM	ENSG00000144182.17	ENST00000393473.6	1424	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	1	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGTCTCTTTTAGTAACG	NA	False	NA	40	True	AATAAA	-37	NA	99154954	99163157	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_99155052_99156300_99156427_99161956
transcript_118279.known	chr2	+	885	3	FSM	ENSG00000144182.17	ENST00000434566.5	885	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGACACTGTTTCCTGGA	99154097	True	NA	NA	False	AATAAA	-9	NA	99154984	99162711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_99155052_99155481_99155545_99161956
transcript_118282.nic	chr2	-	643	3	ISM	ENSG00000158411.11	ENST00000409107.1	662	6	-300	2181	-292	-1091	5prime_fragment	FALSE	canonical	3	268	junction_1	31	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAATAGAAGAGAATGCA	NA	False	NA	NA	False	NA	NA	NA	99181350	99171625	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_99171647_99173914_99174017_99180830
transcript_118283.known	chr2	+	482	2	FSM	ENSG00000144182.17	ENST00000449211.1	482	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGAATGCTGTCCAACCC	99154089	True	NA	NA	False	AAAAAG	-38	NA	99154976	99162363	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_99155052_99161956
transcript_118285.nic	chr2	-	618	2	ISM	ENSG00000158411.11	ENST00000409107.1	662	6	-300	4474	-292	-572	5prime_fragment	FALSE	canonical	3	330	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTAAAGAGGTTGTTTT	NA	False	NA	NA	False	CATAAA	-23	NA	99181350	99173918	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_99174017_99180830
transcript_11829.known	chr1	+	3284	3	FSM	ENSG00000162775.17	ENST00000617047.1	3284	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	7	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTCTGCCTGGAAGTG	110334021	True	NA	22	True	AATAAA	-20	NA	110339465	110346677	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_110342269_110345538_110345650_110346307
transcript_118292.known	chr2	-	4686	23	FSM	ENSG00000135945.10	ENST00000393445.7	4686	23	0	0	0	0	multi-exon	TRUE	canonical	3	72	junction_15	28.3636727855244	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTAGTGGATATTTGGAAC	-99487639	True	NA	-4	True	AATAAA	-18	NA	99489973	99400474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_99401353_99402243_99402347_99402643_99402801_99402888_99403107_99403694_99403816_99404443_99404678_99405909_99406107_99406324_99406491_99408028_99408132_99410694_99410868_99412730_99412952_99418827_99418948_99421498_99421654_99424151_99424281_99429839_99429946_99434331_99434449_99435833_99435942_99438600_99439311_99442316_99442470_99449335_99449505_99462495_99462623_99464921_99464986_99489816
transcript_118293.known	chr2	-	4731	23	FSM	ENSG00000135945.10	ENST00000258428.8	4731	23	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_15	32.9506267262535	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTAGTGGATATTTGGA	-99487683	True	NA	-6	True	AATAAA	-16	NA	99490017	99400476	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_99401353_99402243_99402347_99402643_99402801_99402888_99403107_99403694_99403816_99404443_99404678_99405909_99406107_99406324_99406491_99408028_99408132_99410694_99410868_99412730_99412952_99418827_99418948_99421498_99421654_99424151_99424281_99429839_99429949_99434331_99434449_99435833_99435942_99438600_99439311_99442316_99442470_99449335_99449505_99462495_99462623_99464921_99464986_99489816
transcript_11830.nnic	chr1	-	1031	3	NNC	ENSG00000227963.2	novel	2611	4	NA	NA	-7	-22761	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	1.5	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGCATCTAGTGCATGG	-110338857	True	NA	2	True	ATTAAA	-25	NA	110339178	110315020	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_110315752_110318764_110318883_110338996
transcript_118314.nic	chr2	-	3637	20	ISM	ENSG00000135945.10	ENST00000393445.7	4686	23	-256	2581	-194	0	5prime_fragment	FALSE	canonical	3	72	junction_12	22.9049583958053	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAACAAGAAGAAAAAAACC	-99490209	False	NA	NA	False	AAGAAA	-7	NA	99490229	99403055	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_99403107_99403694_99403816_99404443_99404678_99405909_99406107_99406324_99406491_99408028_99408132_99410694_99410868_99412730_99412952_99418827_99418948_99421498_99421654_99424151_99424281_99429839_99429946_99434331_99434449_99435833_99435942_99438600_99439311_99442316_99442470_99449335_99449505_99462495_99462623_99464921_99464986_99489816
transcript_118315.nic	chr2	-	3467	20	ISM	ENSG00000135945.10	ENST00000258428.8	4731	23	-39	2579	-21	0	5prime_fragment	FALSE	canonical	3	35	junction_12	28.6610722707981	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAACAAGAAGAAAAAAACC	-99487722	True	NA	NA	False	AAGAAA	-7	NA	99490056	99403055	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_99403107_99403694_99403816_99404443_99404678_99405909_99406107_99406324_99406491_99408028_99408132_99410694_99410868_99412730_99412952_99418827_99418948_99421498_99421654_99424151_99424281_99429839_99429949_99434331_99434449_99435833_99435942_99438600_99439311_99442316_99442470_99449335_99449505_99462495_99462623_99464921_99464986_99489816
transcript_11832.known	chr1	+	3214	2	FSM	ENSG00000162775.17	ENST00000654015.1	3214	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTCTGCCTGGAAGTG	110333980	True	NA	22	True	AATAAA	-20	NA	110339424	110346677	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_110342269_110346307
transcript_118338.nic	chr2	+	1132	5	ISM	ENSG00000158417.11	ENST00000617677.1	4698	25	18	36574	0	-26999	5prime_fragment	FALSE	canonical	3	605	junction_4	111.231740074495	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAGAAAAGGAAGAAAAAGA	99321477	True	NA	-73	True	AAAAAG	-25	NA	99337388	99363691	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_99337590_99360235_99360362_99360464_99360550_99361147_99361821_99363644
transcript_118343.known	chr2	-	1508	5	FSM	ENSG00000115514.12	ENST00000264255.8	1508	5	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_1	76.6138858171285	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTTTTTCAAGAAAGTCAA	-99328218	True	NA	44	True	CATAAA	-20	NA	99336333	99318981	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_99319800_99321954_99322210_99327534_99327654_99333021_99333243_99336238
transcript_118349.nic	chr2	+	537	4	ISM	ENSG00000158417.11	ENST00000617677.1	4698	25	-56	39067	-56	-29492	5prime_fragment	FALSE	canonical	3	723	junction_2	88.9356821279038	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGACAGAAGGGCAAAAAACA	NA	False	NA	-24	True	GATAAA	-10	NA	99337314	99361198	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_99337590_99360235_99360362_99360464_99360550_99361147
transcript_11835.known	chr1	-	694	5	FSM	ENSG00000134248.14	ENST00000483260.5	694	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	1185.13944327239	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTCTAGATTCTTTAAA	-110394757	True	NA	-23	True	AATAAA	-21	NA	110407668	110401248	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_110401584_110403918_110404037_110406317_110406380_110407032_110407129_110407585
transcript_118350.nic	chr2	+	760	4	ISM	ENSG00000158417.11	ENST00000617677.1	4698	25	-56	38844	-56	-29269	5prime_fragment	FALSE	canonical	3	723	junction_2	88.9356821279038	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAGAGCGTTCAAGAATA	NA	False	NA	-42	True	AGTAAA	-5	NA	99337314	99361421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_99337590_99360235_99360362_99360464_99360550_99361147
transcript_118351.nic	chr2	+	793	4	ISM	ENSG00000158417.11	ENST00000617677.1	4698	25	-1	38756	-1	-29181	5prime_fragment	FALSE	canonical	3	723	junction_2	88.9356821279038	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAAAAACAAGCCAGGTC	99321458	True	NA	46	True	NA	NA	NA	99337369	99361509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_99337590_99360235_99360362_99360464_99360550_99361147
transcript_118352.nic	chr2	+	953	4	ISM	ENSG00000158417.11	ENST00000617677.1	4698	25	-1	38596	-1	-29021	5prime_fragment	FALSE	canonical	3	723	junction_2	88.9356821279038	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGTTAGAAACAGGTAA	99321458	True	NA	45	True	AAAAAG	-43	NA	99337369	99361669	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_99337590_99360235_99360362_99360464_99360550_99361147
transcript_118353.nic	chr2	+	1104	4	ISM	ENSG00000158417.11	ENST00000617677.1	4698	25	-1	38445	-1	-28870	5prime_fragment	FALSE	canonical	3	723	junction_2	88.9356821279038	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGTTAATACTTTAGAGG	99321458	True	NA	NA	False	NA	NA	NA	99337369	99361820	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_99337590_99360235_99360362_99360464_99360550_99361147
transcript_118355.known	chr2	-	739	4	FSM	ENSG00000115514.12	ENST00000438680.1	739	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	269.830811188542	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAGAAGAGATTGATTTT	-99328218	True	NA	NA	False	NA	NA	NA	99336333	99321943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_99322210_99327534_99327654_99332983_99333243_99336238
transcript_118356.known	chr2	-	1111	4	FSM	ENSG00000115514.12	ENST00000409434.5	1111	4	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_3	15.1070255914995	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATATTTTAAAATACTAG	-99328218	True	NA	-2	True	AATAAA	-28	NA	99336333	99321533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_99322210_99327534_99327654_99333021_99333243_99336238
transcript_118360.nic	chr2	+	423	3	ISM	ENSG00000158417.11	ENST00000617677.1	4698	25	7	39716	7	-30141	5prime_fragment	FALSE	canonical	3	723	junction_2	96.5	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAAGACAGACCTTTGTT	99321466	True	NA	NA	False	NA	NA	NA	99337377	99360549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_99337590_99360235_99360362_99360464
transcript_118361.nic	chr2	+	389	2	ISM	ENSG00000158417.11	ENST00000617677.1	4698	25	-56	39916	-56	-30341	5prime_fragment	FALSE	canonical	3	916	junction_1	0	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGACTTTGAGTAAGTAT	NA	False	NA	59	True	AAAAAG	-18	NA	99337314	99360349	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_99337590_99360235
transcript_118362.known	chr2	-	599	2	FSM	ENSG00000115514.12	ENST00000465183.1	599	2	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATGGAGGGCTAGGGAG	-99328241	True	NA	NA	False	AAGAAA	-42	NA	99336356	99332761	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_99333243_99336238
transcript_11837.known	chr1	-	1154	4	FSM	ENSG00000134248.14	ENST00000474861.6	1154	4	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_3	1105.4544565723	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTCTAGATTCTTTAAA	-110394760	True	NA	-23	True	AATAAA	-21	NA	110407671	110401248	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_110401584_110403918_110404037_110406317_110406380_110407032
transcript_118370.nic	chr2	-	2678	7	NIC	ENSG00000115526.11	novel	2854	7	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_6	73.581398615562	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGCTGCGGTTCTGGGA	-100417358	False	NA	-4	True	AATAAA	-20	NA	100417376	100391859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_100393783_100395508_100395615_100397907_100398143_100402563_100402656_100406575_100406708_100415040_100415112_100417257
transcript_118372.known	chr2	-	2854	7	FSM	ENSG00000115526.11	ENST00000264249.8	2854	7	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	31.3408678884296	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGCTGCGGTTCTGGGA	-100416034	True	NA	-4	True	AATAAA	-20	NA	100417668	100391859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_100393783_100395508_100395615_100397907_100398143_100402563_100402656_100406575_100406708_100415040_100415112_100417373
transcript_118378.known	chr2	+	1038	6	FSM	ENSG00000115539.14	ENST00000264254.11	1038	6	0	0	0	0	multi-exon	FALSE	canonical	3	975	junction_1	94.0008510599771	450	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCCTCATTTATATTT	100556436	True	NA	29	True	ATTAAA	-26	NA	100562992	100576739	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_100563074_100566502_100566630_100568930_100569022_100569577_100569722_100571589_100571799_100576353
transcript_11838.known	chr1	-	620	4	FSM	ENSG00000134248.14	ENST00000602318.6	620	4	0	0	0	0	multi-exon	FALSE	canonical	3	2164	junction_3	128.315583188048	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATCTTTTCTAGATTCTT	-110394783	True	NA	-27	True	AATAAA	-17	NA	110407694	110401252	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_110401584_110403918_110404037_110406317_110406380_110407585
transcript_118383.known	chr2	-	4190	20	FSM	ENSG00000204634.13	ENST00000409318.2	4190	20	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_18	29.8809271290933	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTCCTTTTCTTTTACC	-101149343	True	NA	-6	True	AAGAAA	-14	NA	101151382	101007227	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_101008274_101010928_101011027_101011450_101011541_101021680_101021747_101022280_101022522_101027382_101027452_101028047_101028147_101028302_101028433_101029490_101029777_101032267_101032386_101033543_101033759_101036017_101036169_101037531_101037709_101038460_101038656_101040177_101040386_101050400_101050642_101054107_101054337_101059420_101059540_101090208_101090365_101151126
transcript_118384.known	chr2	-	3627	20	FSM	ENSG00000204634.13	ENST00000376840.8	3627	20	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_10	16.1773412893199	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTGGTTCCCTTGATGCC	-101149214	False	NA	NA	False	NA	NA	NA	101151253	101007616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_101008274_101010928_101011027_101011450_101011541_101021680_101021747_101022280_101022522_101027382_101027452_101028047_101028147_101028302_101028433_101029490_101029777_101032267_101032386_101033543_101033759_101036017_101036169_101037531_101037709_101038460_101038656_101040177_101040386_101050400_101050642_101054107_101054337_101059420_101059540_101090253_101090365_101151126
transcript_118391.nic	chr2	-	3159	19	ISM	ENSG00000204634.13	ENST00000376840.8	3627	20	-218	3341	-89	82	5prime_fragment	FALSE	canonical	3	84	junction_9	15.3451041776269	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGAAAGAATTGCCCAAA	NA	False	NA	72	True	GATAAA	-2	NA	101151471	101010957	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_101011027_101011450_101011541_101021680_101021747_101022280_101022522_101027382_101027452_101028047_101028147_101028302_101028433_101029490_101029777_101032267_101032386_101033543_101033759_101036017_101036169_101037531_101037709_101038460_101038656_101040177_101040386_101050400_101050642_101054107_101054337_101059420_101059540_101090253_101090365_101151126
transcript_118398.nic	chr2	-	3501	18	ISM	ENSG00000204634.13	ENST00000376840.8	3627	20	-218	3423	-89	0	5prime_fragment	FALSE	canonical	3	84	junction_8	15.5981100798233	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGTTTCAAGGTGATGC	NA	False	NA	-10	True	ATTAAA	-15	NA	101151471	101011039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_101011541_101021680_101021747_101022280_101022522_101027382_101027452_101028047_101028147_101028302_101028433_101029490_101029777_101032267_101032386_101033543_101033759_101036017_101036169_101037531_101037709_101038460_101038656_101040177_101040386_101050400_101050642_101054107_101054337_101059420_101059540_101090253_101090365_101151126
transcript_118404.nnic	chr2	-	3671	18	NNC	ENSG00000204634.13	novel	1093	3	NA	NA	-89	-7515	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	30.9829733350142	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAAGCTGCTCCAGTCTTT	NA	False	NA	-36	True	AATAAA	-2	NA	101151471	101018554	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_101019226_101021680_101021747_101022280_101022522_101027382_101027452_101028047_101028147_101028302_101028433_101029490_101029777_101032267_101032386_101033543_101033759_101036017_101036169_101037531_101037709_101038460_101038656_101040177_101040386_101050400_101050642_101054107_101054337_101059420_101059540_101090253_101090365_101151126
transcript_11841.known	chr1	+	817	3	FSM	ENSG00000224699.10	ENST00000457535.5	817	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACCTTGCAGTGTCATTA	NA	False	NA	NA	False	TATAAA	-29	NA	110407524	110416274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_110407955_110412172_110412294_110416008
transcript_118416.nic	chr2	-	2412	10	ISM	ENSG00000204634.13	ENST00000376840.8	3627	20	-218	25506	-89	-4656	5prime_fragment	FALSE	canonical	3	104	junction_1	10.7163196188262	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACCGAGTGCCTGAAAAG	NA	False	NA	NA	False	NA	NA	NA	101151471	101033122	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_101033759_101036017_101036169_101037531_101037709_101038460_101038656_101040177_101040386_101050400_101050642_101054107_101054337_101059420_101059540_101090253_101090365_101151126
transcript_118418.nic	chr2	-	2251	10	ISM	ENSG00000204634.13	ENST00000376840.8	3627	20	-218	25667	-89	-4817	5prime_fragment	FALSE	canonical	3	104	junction_1	10.7163196188262	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGGGCATGGTGGCGC	NA	False	NA	NA	False	AATACA	-5	NA	101151471	101033283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_101033759_101036017_101036169_101037531_101037709_101038460_101038656_101040177_101040386_101050400_101050642_101054107_101054337_101059420_101059540_101090253_101090365_101151126
transcript_11842.known	chr1	-	2567	9	FSM	ENSG00000168679.18	ENST00000369779.9	2567	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.82915619758885	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAAAAACTTCTTTATTT	NA	False	NA	NA	False	AATAAA	-17	NA	110391026	110362856	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_110363894_110375457_110375552_110376949_110377162_110378852_110379357_110380981_110381144_110381651_110381796_110382833_110382967_110389236_110389356_110390864
transcript_118421.nic	chr2	-	1638	6	ISM	ENSG00000204634.13	ENST00000376840.8	3627	20	-218	32176	-89	-11326	5prime_fragment	FALSE	canonical	3	114	junction_4	10.2293694820355	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAACCTACAAAAAGCATCA	NA	False	NA	NA	False	AAAAAG	-16	NA	101151471	101039792	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_101040386_101050400_101050642_101054107_101054337_101059420_101059540_101090253_101090365_101151126
transcript_118425.known	chr2	+	1291	5	FSM	ENSG00000071082.11	ENST00000264258.8	1291	5	0	0	0	0	multi-exon	FALSE	canonical	3	9528	junction_4	2951.79711150682	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAAAGCATGGTTTGTA	100847305	True	NA	13	True	ATTAAA	-16	NA	101002288	101007267	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_101002316_101002701_101002809_101004157_101004284_101005958_101006072_101006349
transcript_118426.known	chr2	+	1110	5	FSM	ENSG00000071082.11	ENST00000409028.8	1110	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_4	6652.01046207085	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAGAAATAAACTTATTT	100847299	True	NA	NA	False	AATAAA	-20	NA	101002282	101019728	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_101002316_101002701_101002809_101004157_101004284_101005958_101006072_101018997
transcript_11843.known	chr1	-	2476	1	FSM	ENSG00000177272.9	ENST00000369769.4	2476	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCTGATCTGACTAATTA	-110674862	True	NA	NA	False	AATAAA	-16	NA	110674940	110672464	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_110672500_110674900
transcript_118432.known	chr2	+	716	4	FSM	ENSG00000071082.11	ENST00000409320.7	716	4	0	0	0	0	multi-exon	FALSE	canonical	3	11807	junction_1	2155.28064684548	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCATGTTTTTGTTCTTTT	100847309	True	NA	26	True	AATAAA	-14	NA	101002292	101006418	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_101002316_101002701_101002809_101004157_101004284_101005958
transcript_118436.known	chr2	+	641	3	FSM	ENSG00000071082.11	ENST00000409000.5	641	3	0	0	0	0	multi-exon	FALSE	canonical	3	11807	junction_1	2023	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGAGGGGTGAGGGTCGC	100847245	True	NA	NA	False	AATAAA	-21	NA	101002228	101004604	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_101002316_101002701_101002809_101004157
transcript_118437.known	chr2	+	770	5	FSM	ENSG00000071082.11	ENST00000409650.5	770	5	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_4	6669.46832120072	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTAATATAATGTCATGT	100847309	True	NA	NA	False	NA	NA	NA	101002292	101018289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_101002316_101002701_101002809_101004157_101004284_101005958_101006072_101017888
transcript_118438.known	chr2	+	825	4	FSM	ENSG00000071082.11	ENST00000409733.5	825	4	0	0	0	0	multi-exon	FALSE	canonical	3	9528	junction_3	3218.76687913589	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATGTTTTTGTTCTTTTT	100847309	True	NA	27	True	AATAAA	-15	NA	101002292	101006419	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_101002809_101004157_101004284_101005958_101006072_101006349
transcript_118439.known	chr2	+	817	5	FSM	ENSG00000071082.11	ENST00000409038.5	817	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	6678.61446615239	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTCTTTCAGTTATCAA	100847309	True	NA	NA	False	AATATA	-7	NA	101002292	101018306	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_101002316_101002701_101002809_101004157_101004284_101005958_101006072_101017858
transcript_11844.known	chr1	+	1569	9	FSM	ENSG00000143119.14	ENST00000648608.1	1569	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	2.14694550466471	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACAACATTGCTATATATC	110871095	True	NA	15	True	AATAAA	-20	NA	110871187	110899922	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_110871260_110873155_110873249_110891391_110891472_110892344_110892534_110894326_110894402_110894959_110895056_110896652_110896734_110897808_110897893_110899123
transcript_118440.known	chr2	+	2515	7	FSM	ENSG00000158435.8	ENST00000289382.8	2515	7	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_1	49.5131856736724	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATGTATTTTTTACTTT	101244740	True	NA	31	True	ATTAAA	-21	NA	101252885	101270316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_101253479_101257790_101257956_101262538_101262692_101264844_101265048_101266676_101266880_101269039_101269137_101269215
transcript_118443.nic	chr2	+	2705	6	ISM	ENSG00000158435.8	ENST00000289382.8	2515	7	-113	2	-113	-2	intron_retention	FALSE	canonical	3	590	junction_1	54.0725438647009	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGATGTATTTTTTACT	101244627	True	NA	29	True	ATTAAA	-19	NA	101252772	101270314	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_101253479_101257790_101257956_101262538_101262692_101264844_101265048_101266676_101266880_101269039
transcript_118453.known	chr2	-	2010	8	FSM	ENSG00000163162.9	ENST00000424632.5	2010	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	53.0483029792621	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACCAATATTGTGATTT	-101305664	True	NA	-27	True	AATAAA	-19	NA	101308701	101271221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_101271745_101273126_101273342_101281858_101282058_101286080_101286178_101288972_101289056_101294013_101294083_101294930_101295182_101308128
transcript_118457.known	chr2	-	2953	7	FSM	ENSG00000163162.9	ENST00000295317.4	2953	7	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_3	24.8243831746128	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTAGTGGCGGGCGCCTGT	-101305664	True	NA	NA	False	AATACA	-14	NA	101308701	101275600	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_101277282_101281858_101282058_101286080_101286178_101288972_101289056_101294013_101294083_101294930_101295182_101308128
transcript_11846.known	chr1	-	3313	4	FSM	ENSG00000121931.16	ENST00000369763.5	3313	4	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	40.4749579644281	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCTGTCTGGTTAATC	-110960442	True	NA	-11	True	NA	NA	NA	110963922	110947189	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_110948400_110949850_110950124_110951287_110952816_110963620
transcript_118462.nic	chr2	-	1750	4	ISM	ENSG00000163162.9	ENST00000295317.4	2953	7	-32	12630	-32	477	5prime_fragment	FALSE	canonical	3	99	junction_1	13.1233464566864	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTCTTTCCTTTATTCT	-101305696	True	NA	NA	False	NA	NA	NA	101308733	101288230	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_101289056_101294013_101294083_101294930_101295182_101308128
transcript_118466.known	chr2	-	6292	4	FSM	ENSG00000175874.10	ENST00000324768.6	6292	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	8.48528137423857	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATAGTCCTTTCATGTCA	-101387311	True	NA	NA	False	ATTAAA	-18	NA	101387503	101345549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_101351071_101355252_101355367_101383532_101383703_101387016
transcript_118478.known	chr2	-	1183	7	FSM	ENSG00000135953.11	ENST00000411991.5	1183	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	37.1786228900426	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTACAAGCACAACTCGC	-102735391	True	NA	NA	False	NA	NA	NA	102736878	102718813	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_102719208_102723699_102723879_102726844_102726975_102731024_102731069_102732023_102732139_102732321_102732410_102736645
transcript_118479.known	chr2	-	2440	7	FSM	ENSG00000135953.11	ENST00000437075.6	2440	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	37.0225156717729	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAGCCCAGCTTGCTCTG	-102735391	True	NA	NA	False	NA	NA	NA	102736878	102717570	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_102719208_102723699_102723910_102726844_102726975_102731024_102731069_102732023_102732139_102732321_102732393_102736645
transcript_118487.known	chr2	-	5293	6	FSM	ENSG00000135953.11	ENST00000258436.10	5293	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	14.2211110677049	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAACTGTCATTTATTC	-102735401	True	NA	-5	True	AATAAA	-16	NA	102736888	102714629	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_102719208_102723699_102723910_102726844_102726975_102731024_102731069_102732321_102732410_102736645
transcript_118488.nic	chr2	-	2704	6	NIC	ENSG00000135953.11	novel	1183	7	NA	NA	-9	-159	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	32.0162458761173	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCGGGCGTGATGGCGG	-102735410	True	NA	NA	False	AATACA	-10	NA	102736897	102717196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_102719208_102723699_102723879_102726844_102726975_102731024_102731069_102732321_102732410_102736645
transcript_118501.known	chr2	+	3112	5	FSM	ENSG00000170417.16	ENST00000409528.5	3112	5	0	0	0	0	multi-exon	TRUE	canonical	2	12	junction_4	7.64852927038918	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATCATCTCTCCATATTG	102736492	True	NA	NA	False	AATAAA	-36	NA	102736907	102817416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_102737014_102762586_102762687_102764328_102764428_102797862_102798001_102814747
transcript_118505.known	chr2	+	3198	6	FSM	ENSG00000170417.16	ENST00000409173.5	3198	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	7.73045923603508	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTCTCCATATTGTATT	102736495	True	NA	NA	False	AATAAA	-40	NA	102736910	102817420	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_102737014_102758388_102758474_102762586_102762687_102764328_102764428_102797862_102798001_102814747
transcript_118507.known	chr2	+	1414	11	FSM	ENSG00000135972.9	ENST00000258455.8	1414	11	0	0	0	0	multi-exon	FALSE	canonical	3	730	junction_8	92.7064722659643	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCCGCTTTATTTTTTT	105032446	True	NA	20	True	AATAAA	-26	NA	105038068	105099960	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_105038228_105049170_105049351_105071312_105071376_105071458_105071490_105079982_105080063_105088983_105089070_105089919_105089996_105092400_105092570_105093529_105093639_105097154_105097325_105099669
transcript_118509.nic	chr2	+	906	9	ISM	ENSG00000135972.9	ENST00000258455.8	1414	11	0	6369	0	-3697	5prime_fragment	FALSE	canonical	3	730	junction_8	75.2411747316587	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATGGAATTGATTACCA	105032446	True	NA	21	True	AATAAA	-2	NA	105038068	105093591	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_105038228_105049170_105049351_105071312_105071376_105071458_105071490_105079982_105080063_105088983_105089070_105089919_105089996_105092400_105092570_105093529
transcript_11851.known	chr1	-	1796	3	FSM	ENSG00000121931.16	ENST00000485275.2	1796	3	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	45.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTAATATTTCTTAAAC	-110960485	True	NA	-43	True	AAAAAG	-20	NA	110963965	110947221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_110948400_110949850_110950124_110963620
transcript_118514.known	chr2	+	797	2	FSM	ENSG00000226508.1	ENST00000436841.1	797	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTTTTCAAAATTGTCT	105144082	False	NA	NA	False	NA	NA	NA	105144112	105145222	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_105144176_105144488
transcript_118515.known	chr2	-	5680	12	FSM	ENSG00000135966.13	ENST00000393359.7	5680	12	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_11	22.7399964383579	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGGTTTTCACTCGCAC	-105327755	True	NA	-23	True	AATAAA	-16	NA	105329735	105264413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_105267560_105269271_105269706_105272854_105273015_105273543_105273691_105275559_105275704_105277613_105277672_105280381_105280724_105284315_105284399_105296355_105296511_105298510_105298706_105307613_105308319_105329624
transcript_118523.known	chr2	-	2827	12	FSM	ENSG00000135966.13	ENST00000258449.2	2827	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	38.7680110101866	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGTACATAGTAATCCAAG	NA	False	NA	NA	False	AAAACA	-25	NA	105308321	105267120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_105267159_105267196_105267560_105269271_105269706_105272854_105273015_105273543_105273691_105275559_105275704_105277613_105277672_105280381_105280724_105284315_105284399_105296355_105296511_105298510_105298706_105307613
transcript_118524.known	chr2	-	3449	1	FSM	ENSG00000272994.1	ENST00000610036.1	3449	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTTGTTGATAATGTAAT	-105336881	True	NA	1	True	AATATA	-22	NA	105337475	105334026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_105334000_105337500
transcript_118525.known	chr2	+	854	5	FSM	ENSG00000135974.10	ENST00000410049.1	854	5	0	0	0	0	multi-exon	FALSE	canonical	1	36	junction_3	103.454096100638	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAATGGCTTAGTATAT	105333706	True	NA	75	True	TTTAAA	-43	NA	105337531	105345596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_105337687_105339582_105339750_105342847_105342975_105343100_105343224_105345314
transcript_118528.known	chr2	+	4587	4	FSM	ENSG00000135974.10	ENST00000258457.7	4587	4	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_2	16.3571255285137	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGGTAACTTTCTACTTT	105333714	True	NA	NA	False	ATTAAA	-15	NA	105337539	105349211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_105337687_105339582_105339750_105342847_105343224_105345314
transcript_118530.nic	chr2	+	283	2	ISM	ENSG00000135974.10	ENST00000410049.1	854	5	5	5881	-3	-5881	5prime_fragment	FALSE	canonical	3	292	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAACAACATGAGATTAAA	105333711	True	NA	20	True	AATAGA	-26	NA	105337536	105339715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_105337687_105339582
transcript_118531.known	chr2	-	1582	7	FSM	ENSG00000115641.19	ENST00000530340.6	1582	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	48.5855488345615	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGCCAGGCACAGAGT	-105396097	True	NA	-15	True	AATAAA	-17	NA	105399051	105360825	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_105361435_105363284_105363472_105367569_105367740_105373558_105373734_105386360_105386541_105396646_105396698_105398841
transcript_118532.known	chr2	-	1478	7	FSM	ENSG00000115641.19	ENST00000322142.13	1478	7	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_6	52.9614639777515	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTGTGAAATCATGATT	-105396107	True	NA	-1	True	AATAAA	-31	NA	105399061	105360811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_105361435_105363284_105363472_105367569_105367740_105373558_105373734_105386360_105386541_105396646_105396698_105398969
transcript_118533.known	chr2	-	1531	6	FSM	ENSG00000115641.19	ENST00000393353.7	1531	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	33.1264244976726	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGCCAGGCACAGAGT	-105396097	True	NA	-15	True	AATAAA	-17	NA	105399051	105360825	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_105361435_105363284_105363472_105367569_105367740_105373558_105373734_105386360_105386541_105398841
transcript_118534.known	chr2	-	1367	6	FSM	ENSG00000115641.19	ENST00000408995.5	1367	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_5	33.5141761050455	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTGACTTGCAATAAAG	-105396096	True	NA	-50	True	NA	NA	NA	105399050	105360860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_105361435_105363284_105363472_105367569_105367740_105373558_105373734_105386360_105386541_105398969
transcript_118539.known	chr2	+	2666	5	FSM	ENSG00000071051.14	ENST00000233154.9	2666	5	0	0	0	0	multi-exon	FALSE	canonical	3	461	junction_4	36.1273788144117	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCTGTGTGTATTTATCT	105741747	True	NA	15	True	AATAAA	-18	NA	105744911	105894272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_105745139_105816429_105816614_105855047_105855290_105881327_105882050_105892981
transcript_11854.nic	chr1	-	2150	3	ISM	ENSG00000121931.16	ENST00000369763.5	3313	4	-47	2661	-4	-2629	5prime_fragment	FALSE	canonical	3	77	junction_2	7	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGTAATACATTTTAATG	-110960489	True	NA	0	True	AAAACA	-2	NA	110963969	110949850	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_110950124_110951287_110952816_110963620
transcript_118541.known	chr2	+	1795	4	FSM	ENSG00000071051.14	ENST00000451463.6	1795	4	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_3	184.102024854578	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGTGTATTTATCTTT	105745031	False	NA	17	True	AATAAA	-20	NA	105745062	105894274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_105745139_105816429_105816614_105855047_105855290_105892981
transcript_118542.known	chr2	+	753	4	FSM	ENSG00000119147.10	ENST00000238044.8	753	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	1.69967317119759	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTAGAATTCATTTGGGT	106065589	True	NA	NA	False	AATAAA	-21	NA	106065687	106078155	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_106065844_106071843_106071892_106073885_106074044_106077764
transcript_118544.known	chr2	-	1839	15	FSM	ENSG00000115652.15	ENST00000409501.7	1839	15	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_13	33.8846332036653	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTTCCAAGGTCTACTT	-106187862	True	NA	NA	False	GATAAA	-42	NA	106194299	106093507	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_106094158_106096717_106096822_106098715_106098774_106101057_106101119_106104793_106104838_106112645_106112766_106122969_106123092_106125619_106125680_106129673_106129779_106145189_106145371_106158057_106158119_106163666_106163711_106164735_106164785_106166055_106166084_106194147
transcript_118546.nnic	chr2	-	2014	14	NIC	ENSG00000115652.15	novel	1839	15	NA	NA	-83	-3	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	91.7379210242207	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTCATGGACTTCCAGTT	-106187947	True	NA	-22	True	AATAAA	-14	NA	106194384	106093313	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_106094158_106098715_106098774_106101057_106101119_106104793_106104838_106112645_106112766_106122969_106123092_106125619_106125680_106129673_106129779_106145189_106145371_106158057_106158119_106163666_106163711_106164735_106164785_106166055_106166084_106194147
transcript_11855.nic	chr1	-	644	2	ISM	ENSG00000121931.16	ENST00000485275.2	1796	3	-26	2629	-26	-2629	5prime_fragment	FALSE	canonical	3	78	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGTAATACATTTTAATG	-110960511	True	NA	0	True	AAAACA	-2	NA	110963991	110949850	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_110950124_110963620
transcript_118557.nnic	chr2	-	2018	6	NNC	ENSG00000144057.16	novel	6857	6	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	8.25590697622012	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTGTTTTAATTCGTA	-106886322	True	NA	-1	True	AATAAA	-23	NA	106887109	106801599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_106801864_106830065_106830241_106832564_106832667_106834048_106834147_106843034_106844035_106886730
transcript_118560.known	chr2	-	1657	6	FSM	ENSG00000144057.16	ENST00000409087.3	1657	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.95188424369978	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAAAACAGCTGGCCCCA	-106886321	True	NA	NA	False	AAGAAA	-24	NA	106887108	106813075	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_106813225_106830065_106830241_106832564_106832667_106834048_106834147_106843034_106844035_106886975
transcript_118561.known	chr2	-	6857	6	FSM	ENSG00000144057.16	ENST00000361686.8	6857	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	7.31026675299883	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTGTTTTAATTCGTA	-106886320	True	NA	-1	True	AATAAA	-23	NA	106887107	106801599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_106806950_106830065_106830241_106832564_106832667_106834048_106834147_106843034_106844035_106886975
transcript_118562.known	chr2	+	1359	8	FSM	ENSG00000198203.10	ENST00000437390.6	1359	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	6.04405594323034	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACTTGAGTACAAAAGGAT	NA	False	NA	4	True	AATAAA	-15	NA	108288914	108308713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_108289071_108293646_108293819_108294228_108294355_108300795_108300936_108304573_108304701_108305171_108305267_108305414_108305596_108308351
transcript_118563.known	chr2	+	2539	8	FSM	ENSG00000198203.10	ENST00000251481.11	2539	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	5.42481072744215	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCATTGTAAAATTTTTGT	NA	False	NA	NA	False	AATAAA	-22	NA	108288894	108309915	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_108289071_108293646_108293819_108294228_108294355_108300837_108300936_108304573_108304701_108305171_108305267_108305414_108305596_108308351
transcript_118566.known	chr2	+	1045	5	FSM	ENSG00000198075.10	ENST00000409309.3	1045	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	3	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTCAATAAATCACTAGGTA	108378039	False	NA	NA	False	NA	NA	NA	108378184	108387640	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_108378507_108381761_108381888_108383415_108383511_108386191_108386373_108387319
transcript_118567.nic	chr2	+	2929	7	FSM	ENSG00000135968.22	ENST00000689620.1	4108	7	99	1080	0	0	multi-exon	FALSE	canonical	3	149	junction_1	12.1335164821342	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTATGGTTTTGCAGAT	108446081	True	NA	4	True	AGTAAA	-21	NA	108449205	108472899	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_108449281_108449632_108449690_108451027_108451113_108452398_108452467_108468979_108469085_108469650_108472117_108472826
transcript_118569.known	chr2	+	786	6	FSM	ENSG00000135968.22	ENST00000409821.5	786	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	61.4309368315346	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCTATACACCAAGAAGAG	108446106	True	NA	NA	False	NA	NA	NA	108449230	108470062	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_108449290_108449632_108449690_108451027_108451113_108452398_108452467_108468979_108469085_108469650
transcript_118576.nic	chr2	+	376	5	FSM	ENSG00000135968.22	ENST00000467566.2	764	5	-10	398	-3	-389	multi-exon	FALSE	canonical	3	149	junction_1	14.0089257261219	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGCAAGAGGTTGAGGTA	108446078	True	NA	NA	False	TATAAA	-3	NA	108449202	108469067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_108449281_108449632_108449690_108451027_108451113_108452398_108452467_108468979
transcript_118579.known	chr2	-	558	3	FSM	ENSG00000214184.3	ENST00000322353.3	558	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGTATTAAAATTTCTCA	-108533999	True	NA	NA	False	AATAAA	-9	NA	108534196	108507514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_108507622_108511929_108512013_108533828
transcript_118580.known	chr2	+	4461	10	FSM	ENSG00000169756.16	ENST00000544547.5	4461	10	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_7	16.1665712101038	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATAACCTGTTGTATAT	108534323	False	NA	17	True	AATAAA	-15	NA	108534354	108687238	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_108534595_108659604_108659765_108670780_108670848_108672324_108672446_108672879_108673030_108675877_108676029_108676605_108676699_108677978_108678028_108680694_108680771_108683884
transcript_118583.known	chr2	+	1627	10	FSM	ENSG00000169756.16	ENST00000409441.5	1627	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	27.2967234500977	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAACAAATCTTATACAA	108621056	True	NA	NA	False	AAGAAA	-29	NA	108621265	108684448	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_108621462_108659604_108659765_108670780_108670848_108672324_108672446_108672879_108673030_108675877_108676029_108676605_108676699_108677978_108678028_108680694_108680771_108683884
transcript_118599.known	chr2	+	11708	29	FSM	ENSG00000153201.16	ENST00000283195.11	11708	29	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_6	114.17938692233	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTAAGTGGTACTTTAT	108708029	True	NA	31	True	AATAAA	-15	NA	108719481	108785809	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_108719679_108729131_108729200_108730773_108730886_108731321_108731475_108735531_108735763_108736103_108736250_108740488_108740682_108746710_108746799_108748919_108749130_108751263_108751446_108751527_108751704_108751870_108751995_108752997_108753160_108753425_108753564_108753824_108753972_108754904_108755085_108755175_108755260_108758412_108758549_108762100_108762196_108763236_108768389_108771700_108771872_108772488_108772582_108772867_108773047_108775731_108775937_108777129_108777232_108781268_108781430_108782127_108782402_108782527_108782863_108783595
transcript_11860.known	chr1	-	2098	10	FSM	ENSG00000156171.15	ENST00000484310.6	2098	10	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_9	34.8502971275216	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGCATCTACAAAAACAGT	-111136388	True	NA	NA	False	ATTAAA	-24	NA	111140093	111117162	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_111118268_111118804_111118898_111119876_111119960_111120515_111120694_111124741_111124882_111126226_111126295_111131423_111131569_111137522_111137587_111139500_111139667_111140037
transcript_118600.nic	chr2	+	1154	7	ISM	ENSG00000153201.16	ENST00000283195.11	11708	29	-54	45128	-54	5130	5prime_fragment	FALSE	canonical	3	127	junction_6	19.7961836950683	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTCTTCCACTTGTAGG	NA	False	NA	NA	False	NA	NA	NA	108719427	108740681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_108719679_108729131_108729200_108730773_108730886_108731321_108731475_108735531_108735763_108736103_108736250_108740488
transcript_118609.known	chr2	+	2375	15	FSM	ENSG00000163006.12	ENST00000295124.9	2375	15	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_13	21.3388598283861	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGTTAAATAATACTGTC	108781510	True	NA	NA	False	AATAAA	-20	NA	108786770	108876578	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_108786916_108788031_108788090_108788851_108788967_108791674_108791803_108794539_108794722_108798427_108798587_108804888_108805009_108812630_108812709_108812819_108812928_108815940_108816106_108839184_108839302_108846737_108846931_108856793_108856971_108873450_108873590_108876087
transcript_11861.nic	chr1	-	1986	10	NIC	ENSG00000156171.15	novel	2098	10	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_9	64.490213632155	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAGAGCTTCTTAGATT	-111136401	True	NA	-4	True	AATAAA	-13	NA	111140106	111117332	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_111118268_111118804_111118898_111119876_111119960_111120515_111120694_111124741_111124882_111126226_111126295_111131423_111131569_111137522_111137587_111139500_111139712_111140037
transcript_118614.known	chr2	+	2250	14	FSM	ENSG00000163006.12	ENST00000412964.6	2250	14	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_13	34.0013922443804	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGTTAAATAATACTGTC	108781496	True	NA	NA	False	AATAAA	-20	NA	108786756	108876578	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_108786916_108788031_108788090_108788851_108788967_108791674_108791803_108794539_108794722_108798427_108798587_108804888_108805009_108812630_108812709_108812819_108812928_108815940_108816106_108839184_108839302_108846737_108846931_108856793_108856971_108876087
transcript_118632.nic	chr2	+	1100	9	ISM	ENSG00000163006.12	ENST00000412964.6	2250	14	-17	63675	-17	18191	5prime_fragment	FALSE	canonical	3	142	junction_1	13.4204834115616	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACCAGTTTCAAAAACTTA	108781479	True	NA	NA	False	AAGAAA	-3	NA	108786739	108812903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_108786916_108788031_108788090_108788851_108788967_108791674_108791803_108794539_108794722_108798427_108798587_108804888_108805009_108812630_108812709_108812819
transcript_118642.known	chr2	+	539	4	FSM	ENSG00000163006.12	ENST00000447782.1	539	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	78.5408598543883	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTGCAGGTAAGAACTAA	108781527	True	NA	NA	False	NA	NA	NA	108786787	108794712	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_108786916_108788851_108788967_108791679_108791803_108794539
transcript_118648.known	chr2	-	3091	12	FSM	ENSG00000186522.15	ENST00000356688.8	3091	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	168.670934951819	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTAATTTTCCTTTCT	-109614106	False	NA	-51	True	AATAAA	-44	NA	109614143	109542981	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_109544325_109545459_109545543_109546049_109546238_109553086_109553220_109564365_109564535_109565762_109565860_109567814_109567977_109574580_109574768_109585125_109585322_109585720_109585839_109593050_109593120_109613797
transcript_118649.known	chr2	-	3014	11	FSM	ENSG00000186522.15	ENST00000397712.7	3014	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	116.523345300416	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATCTGTATACTTTAAAT	-109613929	False	2049	-10	True	AATAAA	-17	NA	109613966	109542798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_109544325_109546049_109546238_109553086_109553220_109564365_109564535_109565762_109565860_109567814_109567977_109574580_109574768_109585125_109585322_109585720_109585839_109593050_109593120_109613797
transcript_11865.nic	chr1	-	1480	10	NIC	ENSG00000156171.15	novel	2098	10	NA	NA	26	214	combination_of_known_junctions	FALSE	canonical	3	59	junction_9	64.490213632155	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATATCATAGTTTTTTATA	-111140155	False	NA	-33	True	AATAAA	-13	NA	111140177	111117909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_111118268_111118804_111118898_111119876_111119960_111120515_111120694_111124741_111124882_111126226_111126295_111131423_111131569_111137522_111137587_111139500_111139712_111140037
transcript_118653.known	chr2	-	1605	10	FSM	ENSG00000186522.15	ENST00000415095.5	1605	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	120.872752190981	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATCACAGTGTGAAAAGG	-109613798	False	NA	NA	False	AATAAA	-3	NA	109613835	109545801	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_109546238_109553086_109553220_109564365_109564535_109565762_109565860_109567814_109567977_109574580_109574768_109585125_109585322_109585720_109585839_109593050_109593120_109613797
transcript_118655.known	chr2	-	2719	10	FSM	ENSG00000186522.15	ENST00000397714.6	2719	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	150.999632081965	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGTTTAATTTTCCT	-109611593	True	NA	-55	True	AATAAA	-40	NA	109613927	109542985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_109544325_109546049_109546238_109553086_109553220_109564365_109564535_109565762_109565860_109567814_109567977_109574580_109574768_109585125_109585322_109585720_109585839_109613797
transcript_118663.nic	chr2	-	2569	8	NIC	ENSG00000186522.15	novel	3091	12	NA	NA	-66	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	167.289069138008	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGTTTAATTTTCCT	-109614172	False	NA	-55	True	AATAAA	-40	NA	109614209	109542985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_109544325_109546049_109546238_109553086_109553220_109564365_109564535_109565762_109565860_109567814_109567977_109593050_109593120_109613797
transcript_118665.nnic	chr2	-	2459	7	NIC	ENSG00000186522.15	novel	2719	10	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	168.15014785073	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGTTTAATTTTCCT	-109614131	False	NA	-55	True	AATAAA	-40	NA	109614168	109542985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_109544325_109546049_109546238_109553086_109553220_109564365_109564535_109565762_109565860_109567814_109567977_109613797
transcript_118667.nic	chr2	-	840	4	ISM	ENSG00000186522.15	ENST00000415095.5	1605	10	-374	39279	-66	639	5prime_fragment	FALSE	canonical	3	353	junction_2	23.4426012966897	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTCGCCTTATAGCCCC	-109614172	False	NA	-128	True	AATAAA	-21	NA	109614209	109585080	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_109585322_109585720_109585839_109593050_109593120_109613797
transcript_118668.known	chr2	+	4627	1	FSM	ENSG00000198142.5	ENST00000356454.5	4627	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTCTGAATTGTCTAA	109612430	True	NA	36	True	AATAAA	-16	NA	109614363	109618990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_109614400_109619000
transcript_118671.known	chr2	+	3304	20	FSM	ENSG00000015568.13	ENST00000393283.5	3304	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	52.6462611100187	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTCCTTGTTTTTTTAA	NA	False	NA	NA	False	AATAAA	-17	NA	109792757	109833019	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_109792990_109794164_109794538_109801782_109801851_109803431_109803544_109803978_109804132_109808173_109808405_109808749_109808896_109813459_109813656_109819695_109819784_109821904_109822115_109824221_109824404_109824486_109824663_109824829_109824954_109825875_109826035_109826300_109826439_109826700_109826848_109827791_109827972_109828064_109828149_109831316_109831453_109832850
transcript_118672.known	chr2	+	563	4	FSM	ENSG00000015568.13	ENST00000430736.5	563	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	59.7457576364678	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTAAACAAACAAAACATAAA	NA	False	NA	NA	False	TATAAA	-7	NA	109794304	109804131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_109794538_109801785_109801851_109803431_109803544_109803978
transcript_118673.known	chr2	-	2317	4	FSM	ENSG00000144063.4	ENST00000272462.3	2317	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	25.4863798048204	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTTGGTCGACTTCATCT	NA	False	NA	NA	False	AATAAA	-20	NA	110115822	110083869	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_110085758_110087571_110087698_110091602_110091771_110115687
transcript_118674.known	chr2	-	2752	20	FSM	ENSG00000144061.14	ENST00000393272.7	2752	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	26.6495674633451	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATCCATTTGAGAAAGTT	-110205039	False	NA	NA	False	AATAAA	-32	NA	110205066	110123335	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_110124064_110125636_110125682_110129185_110129260_110131678_110131792_110143541_110143642_110144492_110144570_110146752_110146836_110147915_110148027_110150181_110150257_110160126_110160256_110161602_110161698_110163047_110163133_110164519_110164731_110165051_110165156_110168451_110168554_110169805_110169999_110178422_110178548_110179623_110179685_110201420_110201495_110204899
transcript_118675.known	chr2	-	2522	20	FSM	ENSG00000144061.14	ENST00000445609.7	2522	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	26.6495674633451	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAAGTTAAAGTGATCCA	-110204986	False	8723	NA	False	AATAAA	-20	NA	110205013	110123347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_110124064_110125636_110125682_110129185_110129260_110131678_110131792_110143541_110143642_110144492_110144570_110146752_110146836_110147915_110148027_110150181_110150257_110160126_110160256_110161602_110161698_110163047_110163136_110164687_110164731_110165051_110165156_110168451_110168554_110169805_110169999_110178422_110178548_110179623_110179685_110201420_110201495_110204899
transcript_118678.known	chr2	-	742	4	FSM	ENSG00000144061.14	ENST00000418527.1	742	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	14.7044966667418	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGAGTGTGGTGACTCAT	-110204972	False	8723	3	True	CATAAA	-25	NA	110204999	110178040	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_110178548_110179623_110179685_110201420_110201495_110204899
transcript_11868.known	chr1	+	2251	9	FSM	ENSG00000134255.15	ENST00000545121.5	2251	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	55.0407519479885	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTGTGATGTGTCTTG	111139582	False	NA	12	True	AATAAA	-21	NA	111139626	111185102	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_111139762_111147641_111148054_111159379_111159528_111161154_111161297_111174878_111174964_111182186_111182319_111182798_111182958_111183461_111183588_111184190
transcript_118680.known	chr2	-	2246	21	FSM	ENSG00000144061.14	ENST00000417665.5	2246	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	26.6748945639903	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGTCACTTTACAACTT	-110204968	False	8723	-2	True	AATAAA	-17	NA	110204995	110123707	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_110124064_110125218_110125324_110125636_110125682_110129185_110129260_110131678_110131792_110143541_110143642_110144492_110144570_110146752_110146836_110147915_110148027_110150181_110150257_110160126_110160256_110161602_110161698_110163047_110163133_110164687_110164731_110165051_110165156_110168451_110168554_110169805_110169999_110178422_110178548_110179623_110179685_110201420_110201495_110204899
transcript_118681.known	chr2	+	735	4	FSM	ENSG00000282304.1	ENST00000568189.5	735	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	9.97775303139718	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATTCACTCTGCTGAA	NA	False	NA	NA	False	NA	NA	NA	110245590	110285856	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_110245794_110279605_110279774_110283678_110283805_110285618
transcript_118683.known	chr2	+	744	3	FSM	ENSG00000261760.8	ENST00000564038.5	744	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTGTTTGCCTATAAAAA	110245452	True	NA	NA	False	AATAAA	-16	NA	110245650	110266516	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_110245794_110262650_110262766_110266030
transcript_118684.known	chr2	-	427	2	FSM	ENSG00000175701.11	ENST00000611969.5	427	2	0	0	0	0	multi-exon	FALSE	canonical	3	588	junction_1	0	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGACCCTTTTATTTTTTC	-110203824	True	NA	-22	True	AATAAA	-14	NA	110212547	110211528	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_110211623_110212214
transcript_118686.known	chr2	-	1528	4	FSM	ENSG00000273471.1	ENST00000488671.1	1528	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	18.8561808316413	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATAGAAAAAAAA	NA	False	NA	NA	False	AATAAA	-24	NA	110433673	110386410	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_110387398_110423660_110423874_110424052_110424143_110433435
transcript_118687.known	chr2	-	7305	23	FSM	ENSG00000183054.12	ENST00000329516.8	7305	23	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_22	37.2086200356675	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACTGTCTCTTTGGGGTT	NA	False	NA	NA	False	ATTAAA	-34	NA	110577222	110513801	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_110515646_110523495_110523698_110526264_110526405_110533464_110535689_110536415_110536511_110540054_110540191_110543358_110543443_110543535_110543716_110544659_110544807_110545068_110545207_110545472_110545632_110546553_110546678_110546844_110547021_110547103_110547286_110549392_110549603_110551723_110551812_110557851_110558048_110562611_110562758_110563102_110563334_110567375_110567529_110567963_110568076_110569656_110569725_110576952
transcript_118691.known	chr2	-	3762	25	FSM	ENSG00000169679.15	ENST00000302759.11	3762	25	0	0	0	0	multi-exon	FALSE	canonical	1	372	junction_3	157.143727337959	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTACCTGTTCTTCATTGC	-110664562	True	NA	-34	True	AATAAA	-17	NA	110678063	110637527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_110638160_110639741_110639849_110641033_110641206_110641306_110641465_110641641_110641804_110642118_110642235_110649233_110649378_110650545_110650785_110653435_110653524_110655738_110655917_110657035_110657118_110657545_110657646_110658409_110658521_110658613_110658743_110659977_110660037_110661581_110661842_110666262_110666415_110667520_110667706_110667796_110667850_110669452_110669554_110670524_110670569_110672660_110672858_110674085_110674225_110674305_110674366_110677969
transcript_118696.known	chr2	-	2501	20	FSM	ENSG00000169679.15	ENST00000466333.5	2501	20	0	0	0	0	multi-exon	FALSE	canonical	3	733	junction_7	86.2317948188088	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTGAGTTGTCTTTTGT	-110664527	True	NA	NA	False	AATAAA	-24	NA	110678028	110642113	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_110642235_110649233_110649378_110650545_110650785_110653435_110653524_110655738_110655917_110657035_110657118_110657545_110657646_110658409_110658521_110658613_110658743_110659977_110660037_110661581_110661842_110666262_110666415_110667520_110667706_110667796_110667850_110669452_110669554_110670524_110670569_110672660_110672858_110674085_110674225_110674305_110674366_110677969
transcript_11870.known	chr1	+	2203	9	FSM	ENSG00000134255.15	ENST00000357172.9	2203	9	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_4	20.3147114180832	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTGATGTGTCTTGTG	111137574	True	NA	14	True	AATAAA	-23	NA	111140222	111185104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_111140308_111147641_111148054_111159379_111159528_111161154_111161297_111174878_111174964_111182186_111182319_111182798_111182958_111183461_111183588_111184190
transcript_118701.nic	chr2	-	1496	12	ISM	ENSG00000169679.15	ENST00000466333.5	2501	20	-68	16510	-33	64	5prime_fragment	FALSE	canonical	3	897	junction_4	75.0169126936229	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCATTAGGTAAAGTATT	-110664595	True	NA	NA	False	NA	NA	NA	110678096	110658623	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_110658743_110659977_110660037_110661581_110661842_110666262_110666415_110667520_110667706_110667796_110667850_110669452_110669554_110670524_110670569_110672660_110672858_110674085_110674225_110674305_110674366_110677969
transcript_118702.nic	chr2	-	2745	9	ISM	ENSG00000169679.15	ENST00000465029.5	1999	10	-33	3708	-33	1386	5prime_fragment	FALSE	canonical	3	897	junction_1	83.5268482285786	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAACAGCAGCATGTTTGA	-110664595	True	NA	NA	False	TTTAAA	-16	NA	110678096	110664575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_110666415_110667520_110667706_110667796_110667850_110669452_110669554_110670524_110670569_110672660_110672858_110674085_110674225_110674305_110674366_110677969
transcript_118703.nic	chr2	-	933	9	ISM	ENSG00000169679.15	ENST00000465029.5	1999	10	-33	5520	-33	-426	5prime_fragment	FALSE	canonical	3	897	junction_1	83.5268482285786	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGAAGCAAATGCTTTT	-110664595	True	NA	NA	False	AGTAAA	-24	NA	110678096	110666387	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_110666415_110667520_110667706_110667796_110667850_110669452_110669554_110670524_110670569_110672660_110672858_110674085_110674225_110674305_110674366_110677969
transcript_118710.known	chr2	+	4885	19	FSM	ENSG00000153093.20	ENST00000676595.1	4885	19	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_13	28.1602556806574	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTGAGCGGGAGGCTAG	110730473	True	NA	NA	False	NA	NA	NA	110732538	111120610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_110732775_110768367_110768465_110784731_110784816_110793649_110793737_110794075_110794175_110798609_110798725_110799013_110799101_110801651_110801725_110805262_110805396_110841370_110841406_110908788_110908906_110933488_110933643_110963623_110963714_110987107_110987218_110995892_110996005_111031626_111031715_111049217_111049289_111092864_111092967_111117615
transcript_118716.known	chr2	+	2699	18	FSM	ENSG00000153093.20	ENST00000439055.6	2699	18	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_15	22.297143982084	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTTCCCGCTGCTTGCAG	110730507	True	NA	12	True	AATAAA	-20	NA	110732572	111118548	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_110732775_110768367_110768465_110784731_110784816_110793649_110793737_110794075_110794175_110798609_110798725_110799013_110799101_110801651_110801725_110805262_110805396_110841370_110841406_110908788_110908906_110933488_110933643_110987107_110987218_110995892_110996005_111031626_111031715_111049217_111049289_111092864_111092967_111117615
transcript_11874.known	chr1	-	1872	9	FSM	ENSG00000156171.15	ENST00000539140.6	1872	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	86.0405972492056	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAGAGCTTCTTAGATT	-111140181	False	NA	-4	True	AATAAA	-13	NA	111140203	111117332	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_111118268_111118804_111118898_111119876_111119960_111120515_111120694_111124741_111124882_111126226_111126295_111131423_111131569_111137522_111137587_111140037
transcript_118746.known	chr2	+	2188	11	FSM	ENSG00000153093.20	ENST00000340561.8	2188	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_10	28.8138855415232	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTCTCTGCTGATAAAT	110730568	True	NA	NA	False	AATAAA	-26	NA	110732633	110888017	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_110732775_110768367_110768465_110784731_110784816_110793649_110793737_110794075_110794175_110798609_110798725_110799013_110799101_110801651_110801725_110805262_110805396_110841370_110841406_110886780
transcript_118751.known	chr2	-	514	2	FSM	ENSG00000172965.17	ENST00000409569.2	514	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGCTTATTAGCTATC	-111494933	True	NA	2	True	ATTAAA	-23	NA	111495086	111429308	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_111429621_111494884
transcript_118754.known	chr2	-	7762	48	FSM	ENSG00000153107.13	ENST00000341068.8	7762	48	0	0	0	0	multi-exon	TRUE	canonical	3	322	junction_42	77.2565936246739	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTTGTTTGCACACATAT	-111876534	True	NA	-3	True	AATAAA	-18	NA	111884193	111767639	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_111769407_111772340_111772476_111776858_111777058_111778674_111778771_111780298_111780386_111782368_111782508_111783896_111783965_111784322_111784401_111785359_111785478_111788233_111788321_111792361_111792556_111794077_111794132_111794232_111794324_111794817_111794895_111800796_111800872_111802427_111802507_111803447_111803531_111803704_111803840_111805801_111805894_111808946_111809182_111815369_111815642_111818839_111818959_111821238_111821454_111822421_111822601_111824965_111825037_111825130_111825168_111825776_111825856_111831285_111831435_111833219_111833312_111834603_111834873_111838437_111838513_111843411_111843600_111847137_111847199_111847724_111847866_111850775_111850911_111856613_111856680_111856795_111856887_111858305_111858402_111862388_111862599_111863674_111863896_111864805_111864952_111868022_111868097_111872629_111872713_111873307_111873409_111873612_111873665_111878809_111878972_111880612_111880850_111883941
transcript_11876.nic	chr1	-	1298	9	NIC	ENSG00000156171.15	novel	2098	10	NA	NA	23	214	combination_of_known_junctions	FALSE	canonical	3	19	junction_4	82.4298944558344	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATATCATAGTTTTTTATA	-111140158	False	NA	-33	True	AATAAA	-13	NA	111140180	111117909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_111118268_111118804_111118898_111119876_111119960_111120515_111120694_111126226_111126295_111131423_111131569_111137522_111137587_111139500_111139667_111140037
transcript_118760.known	chr2	-	580	2	FSM	ENSG00000153107.13	ENST00000467878.1	580	2	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGAGTAGAGTTAAGGTG	-111876522	True	NA	NA	False	NA	NA	NA	111884181	111880509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_111880850_111883941
transcript_118761.known	chr2	+	2972	19	FSM	ENSG00000153208.18	ENST00000439966.5	2972	19	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	5.86183513168966	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGTAAGCTGTCATTAAA	111898041	False	NA	NA	False	NA	NA	NA	111898663	112029000	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_111898797_111929119_111929305_111944959_111945061_111947393_111947568_111965190_111965278_111968136_111968253_111975288_111975473_111982841_111982994_111994250_111994405_111997322_111997477_112001200_112001287_112003091_112003188_112003903_112003985_112008382_112008476_112009947_112010067_112019412_112019523_112021421_112021582_112022257_112022395_112028350
transcript_118763.known	chr2	+	3826	19	FSM	ENSG00000153208.18	ENST00000295408.9	3826	19	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_13	4.23572402603042	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGTGTGAATGGAAAGAT	111897984	True	NA	NA	False	AATAAA	-22	NA	111898606	112029561	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_111898797_111929119_111929541_111944959_111945061_111947393_111947568_111965190_111965278_111968136_111968253_111975288_111975473_111982841_111982994_111994250_111994405_111997322_111997477_112001200_112001287_112003091_112003188_112003903_112003985_112008382_112008476_112009947_112010067_112019412_112019523_112021421_112021582_112022257_112022395_112028350
transcript_118767.known	chr2	+	3600	20	FSM	ENSG00000153208.18	ENST00000421804.6	3600	20	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_19	6.2345654294572	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATATGTTGAACTTACTT	111897985	True	NA	NA	False	AATAAA	-14	NA	111898607	112029366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_111898797_111929119_111929541_111944959_111945061_111947393_111947568_111965190_111965278_111968136_111968253_111975288_111975473_111982841_111982994_111994250_111994405_111997322_111997477_112001200_112001287_112003091_112003188_112003903_112003985_112008382_112008476_112009947_112010067_112019412_112019523_112021421_112021582_112022257_112022395_112028350_112029294_112029323
transcript_118768.known	chr2	+	5162	19	FSM	ENSG00000153214.11	ENST00000283206.9	5162	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	14.7490321925638	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGATTCTTGATAGTAT	112054715	True	NA	13	True	AATAAA	-18	NA	112055268	112119314	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_112055757_112059976_112060038_112064161_112064254_112066935_112067068_112074911_112074963_112077191_112077283_112081056_112081119_112081334_112081519_112086004_112086105_112089624_112089719_112091711_112091784_112097043_112097153_112097232_112097292_112098594_112098699_112100621_112100696_112106001_112106076_112107787_112107841_112112898_112112930_112116083
transcript_118777.known	chr2	+	2303	8	FSM	ENSG00000144152.13	ENST00000331203.7	2303	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	1.98976975388345	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCTGACTTCTACCTGAGC	112138326	True	NA	7	True	AATAAA	-21	NA	112138384	112188218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_112138731_112159675_112159836_112165000_112165172_112175713_112175840_112181738_112181877_112182790_112182929_112185200_112185340_112187133
transcript_118778.known	chr2	+	1394	7	FSM	ENSG00000144152.13	ENST00000409450.7	1394	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.05480466765633	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACGGCGCCCCATGGAATA	112138524	False	NA	NA	False	NA	NA	NA	112138582	112187645	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_112138731_112159675_112159836_112165000_112165172_112175713_112175840_112182790_112182929_112185200_112185340_112187133
transcript_118780.known	chr2	-	1601	9	NNC	ENSG00000144161.14	novel	5892	9	NA	NA	-27	40	at_least_one_novel_splicesite	FALSE	non_canonical	3	59	junction_3	13.3510299228187	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTAGAGTTCGTAACTT	-112253820	True	NA	0	True	AATAAA	-32	NA	112255087	112215864	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_112216469_112230902_112230951_112231837_112231946_112233257_112233372_112234119_112234237_112236561_112236696_112238314_112238529_112250190_112250273_112254907
transcript_118782.nic	chr2	-	540	3	ISM	ENSG00000144161.14	ENST00000409573.7	5892	9	-109	26786	-15	-1729	5prime_fragment	FALSE	canonical	3	79	junction_1	3.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAGTCAAACTATTTTA	NA	False	NA	NA	False	AGTAAA	-15	NA	112255151	112238314	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_112238529_112250190_112250273_112254907
transcript_118783.known	chr2	-	319	2	FSM	ENSG00000144161.14	ENST00000495264.1	319	2	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGATGGAAATGGATATGAG	-112253793	True	NA	NA	False	AAAAAG	-7	NA	112255060	112250106	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_112250273_112254907
transcript_118786.nic	chr2	+	521	2	ISM	ENSG00000188177.14	ENST00000409871.6	11539	12	-27	40147	-27	-12280	5prime_fragment	FALSE	canonical	3	20	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGCAAAAGAGAATGAAAA	112274356	True	NA	NA	False	AATACA	-8	NA	112275569	112299912	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_112276027_112299848
transcript_118787.nic	chr2	+	581	2	ISM	ENSG00000188177.14	ENST00000409871.6	11539	12	-27	40087	-27	-12220	5prime_fragment	FALSE	canonical	3	20	junction_1	0	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CATAAGAAAGAGAGAGAGAA	112274356	True	NA	NA	False	AAGAAA	-5	NA	112275569	112299972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_112276027_112299848
transcript_118788.known	chr2	-	7299	23	FSM	ENSG00000169629.12	ENST00000302558.8	7299	23	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	44.9066985008688	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACTGTCTCTTTGGGGTT	-112433443	False	NA	NA	False	ATTAAA	-34	NA	112433645	112368368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_112370213_112378052_112378255_112380823_112380964_112388023_112390248_112390974_112391070_112394617_112394754_112397921_112398006_112398098_112398279_112399222_112399370_112399631_112399770_112400035_112400195_112401116_112401241_112401407_112401584_112401666_112401849_112403965_112404176_112406296_112406385_112412430_112412627_112417192_112417339_112417683_112417915_112421959_112422113_112422547_112422660_112424239_112424308_112433381
transcript_118795.known	chr2	+	4376	16	FSM	ENSG00000125630.16	ENST00000333990.10	4376	16	0	0	0	0	multi-exon	TRUE	canonical	1	5	junction_1	110.825067360934	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCCTCCTGCCCCTTTGT	112542004	True	NA	8	True	AATAAA	-21	NA	112542188	112576299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_112542672_112545830_112545923_112547011_112547180_112547420_112547568_112549266_112549400_112550865_112551003_112551774_112551999_112552644_112552817_112557909_112558082_112559292_112559575_112564365_112564500_112567966_112568138_112568745_112568903_112572561_112572759_112573561_112573816_112574846
transcript_118797.known	chr2	+	7527	15	FSM	ENSG00000125630.16	ENST00000263331.10	7527	15	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_5	35.9560389182941	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTTTGCAAATATTTTCT	112533531	True	NA	23	True	TATAAA	-16	NA	112542464	112579818	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_112542672_112547011_112547180_112547420_112547568_112549266_112549400_112550865_112551003_112551774_112551999_112552644_112552817_112557909_112558082_112559292_112559575_112564365_112564500_112567966_112568138_112568745_112568903_112572561_112572759_112573561_112573816_112574846
transcript_118811.known	chr2	+	691	4	FSM	ENSG00000125611.16	ENST00000324913.10	523	4	-168	0	-28	0	multi-exon	FALSE	canonical	3	508	junction_1	52.8036194045657	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGATTCCTGCCATCCGT	112584427	False	NA	29	True	AATAAA	-21	NA	112584440	112589040	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_112584650_112585973_112586115_112586199_112586366_112588865
transcript_118814.known	chr2	+	748	3	FSM	ENSG00000125611.16	ENST00000454841.5	748	3	0	0	0	0	multi-exon	FALSE	canonical	3	508	junction_1	56.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGATTCCTGCCATCCGT	112581053	True	NA	29	True	AATAAA	-21	NA	112584468	112589040	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_112584650_112585973_112586366_112588865
transcript_118815.known	chr2	+	529	4	FSM	ENSG00000125611.16	ENST00000469030.1	529	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	292.271943383023	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGATTCCTGCCATCCGT	112584854	False	NA	29	True	AATAAA	-21	NA	112584871	112589040	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_112584919_112585973_112586115_112586199_112586366_112588865
transcript_118816.known	chr2	-	2022	5	FSM	ENSG00000237753.2	ENST00000457336.1	2022	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.433012701892219	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACCGTGTCTTAGAGTTA	-112645615	True	NA	NA	False	AATAAA	-15	NA	112645690	112641831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_112641983_112642082_112642190_112643178_112643294_112643958_112644016_112644098
transcript_118818.nic	chr2	+	3433	12	NIC	ENSG00000144136.11	novel	3297	11	NA	NA	-77	0	combination_of_known_junctions	TRUE	canonical	3	49	junction_5	265.897047124299	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTCTCATGGTTTTCTT	112633517	True	NA	20	True	AATAAA	-23	NA	112645861	112663825	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_112646130_112646562_112647163_112647323_112647465_112647652_112647739_112652701_112652799_112652888_112652948_112657121_112657242_112658824_112659095_112659203_112659763_112660386_112660573_112661141_112661227_112662863
transcript_118819.known	chr2	+	3297	11	FSM	ENSG00000144136.11	ENST00000272542.8	3297	11	0	0	0	0	multi-exon	FALSE	canonical	3	589	junction_2	102.238984736743	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTCTCATGGTTTTCTT	112633594	True	NA	20	True	AATAAA	-23	NA	112645938	112663825	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_112646130_112646562_112647163_112647323_112647465_112647652_112647739_112652701_112652799_112657121_112657242_112658824_112659095_112659203_112659763_112660386_112660573_112661141_112661227_112662863
transcript_11882.known	chr1	-	769	6	FSM	ENSG00000156171.15	ENST00000490780.5	769	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	90.7863425852149	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGGGTTTTTTGCCTA	-111136385	True	NA	NA	False	AATAAA	-25	NA	111140090	111125377	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_111125651_111126226_111126295_111131423_111131569_111137522_111137587_111139500_111139667_111140037
transcript_118827.known	chr2	-	4723	9	FSM	ENSG00000169607.13	ENST00000302450.11	4723	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	5.19464868879504	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAGAATTAGAGTTAACT	-112762936	True	NA	-3	True	AATAAA	-19	NA	112764609	112736348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_112739049_112740817_112741008_112742705_112742770_112746419_112746576_112752266_112752475_112755976_112757215_112760712_112760765_112762502_112762570_112764561
transcript_118832.nic	chr2	-	1558	5	ISM	ENSG00000169607.13	ENST00000302450.11	4723	9	-74	16047	-19	4379	5prime_fragment	FALSE	canonical	3	51	junction_2	2.54950975679639	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAATAAAGGAAATGAATAT	-112763010	True	NA	20	True	TATAAA	-34	NA	112764683	112752395	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_112752475_112755976_112757215_112760712_112760765_112762502_112762570_112764561
transcript_118835.known	chr2	+	2424	2	FSM	ENSG00000125637.16	ENST00000464559.1	2424	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGGGAGGTGTGTCAGT	NA	False	NA	NA	False	AATAAA	-13	NA	113198557	113202912	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_113199227_113201157
transcript_118837.known	chr2	+	8258	6	FSM	ENSG00000189223.15	ENST00000661674.1	8258	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	9.38083151964686	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTTTTCAACTAAAACAAAA	113234953	True	NA	NA	False	NA	NA	NA	113235535	113272917	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_113235571_113238089_113238213_113255389_113255550_113259263_113259585_113263277_113263455_113265475
transcript_118839.known	chr2	+	8119	5	FSM	ENSG00000189223.15	ENST00000653055.1	8119	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	12.0701077045733	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTTTTCAACTAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	113235514	113272917	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_113235571_113238089_113238213_113259263_113259585_113263277_113263455_113265475
transcript_11884.known	chr1	+	2110	3	FSM	ENSG00000134255.15	ENST00000480324.5	2110	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	81	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGATTGAAATTATGGGG	111139610	False	NA	NA	False	NA	NA	NA	111139654	111160970	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_111139762_111147641_111148054_111159379
transcript_118842.known	chr2	+	7831	4	FSM	ENSG00000189223.15	ENST00000669027.1	7831	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	16.4991582276861	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTTTTCAACTAAAACAAAA	113234936	True	NA	NA	False	NA	NA	NA	113235518	113272917	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_113235571_113255389_113255550_113263277_113263455_113265475
transcript_118843.known	chr2	+	2402	4	FSM	ENSG00000189223.15	ENST00000437551.6	2402	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	11.323525167642	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGGAGTTGCATAAGGCA	NA	False	NA	NA	False	AATAAA	-12	NA	113235514	113241410	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_113235571_113238089_113238213_113239088_113241102_113241200
transcript_118847.known	chr2	+	461	2	FSM	ENSG00000189223.15	ENST00000553869.7	461	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATATAGTCAAATCTTTT	113234969	True	NA	NA	False	AAAAAG	-12	NA	113235551	113238531	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_113235571_113238089
transcript_118852.known	chr2	+	1740	16	FSM	ENSG00000136682.16	ENST00000358604.7	1740	16	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_1	530.580462009926	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAAGTGTCACCATTTTA	NA	False	NA	NA	False	ATTAAA	-13	NA	113437790	113496119	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_113438023_113439019_113439118_113441350_113441438_113443766_113443864_113444963_113445056_113453138_113453199_113454740_113454779_113460672_113460720_113462407_113462495_113465128_113465174_113471032_113471090_113482176_113482229_113493756_113493826_113493928_113493995_113495119_113495250_113495636
transcript_118854.known	chr2	+	1827	15	FSM	ENSG00000136682.16	ENST00000259199.9	1827	15	0	0	0	0	multi-exon	FALSE	canonical	3	619	junction_6	450.799674954159	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGTGTTTGTCAGGTTTC	NA	False	NA	NA	False	NA	NA	NA	113437690	113496204	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_113438023_113441350_113441438_113443766_113443864_113444963_113445056_113453138_113453199_113454740_113454779_113460672_113460720_113462407_113462495_113465128_113465174_113471032_113471090_113482176_113482229_113493756_113493826_113493928_113493995_113495119_113495250_113495636
transcript_118863.known	chr2	+	880	3	FSM	ENSG00000136682.16	ENST00000490323.5	880	3	0	0	0	0	multi-exon	FALSE	canonical	3	1476	junction_1	117	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTATTCTAGTGAATTAAA	113431848	True	NA	NA	False	TATAAA	-26	NA	113437838	113444375	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_113438023_113441350_113441438_113443766
transcript_118875.known	chr2	+	1684	10	FSM	ENSG00000146556.15	ENST00000453662.6	1684	10	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_6	91.0994572492675	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAACAGTGTGCTTTTA	113588428	False	NA	NA	False	AATAAA	-12	NA	113588549	113599034	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_113588704_113595062_113595162_113595368_113595516_113595692_113595830_113596067_113596204_113596380_113596583_113596670_113596830_113597485_113597639_113598397_113598467_113598606
transcript_11888.known	chr1	-	1894	12	FSM	ENSG00000162777.17	ENST00000369752.5	1894	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_11	5.30865502569325	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTCTTTGGCTTTTAC	-111204309	False	NA	1	True	AGTAAA	-20	NA	111204409	111187173	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_111187682_111188130_111188371_111188701_111188787_111189211_111189254_111192139_111192318_111194577_111194727_111195915_111196057_111197175_111197254_111197919_111197990_111198629_111198743_111199622_111199799_111204295
transcript_118881.known	chr2	-	2078	3	FSM	ENSG00000240356.6	ENST00000416673.6	2078	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	26	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGGTTAACTTTAGGCAT	-113625903	False	NA	NA	False	CATAAA	-6	NA	113627040	113610501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_113612248_113625608_113625730_113626829
transcript_118883.known	chr2	-	738	3	FSM	ENSG00000240356.6	ENST00000391616.3	738	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	9.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATAAGCTTTAAGATTTT	-113625953	True	NA	NA	False	CATAAA	-45	NA	113627090	113611683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_113612248_113625608_113625730_113627037
transcript_118889.known	chr2	+	2141	9	FSM	ENSG00000144134.19	ENST00000683472.1	2141	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	49.7240824450286	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTAAATGTATGTGC	113626867	True	NA	12	True	AGTAAA	-17	NA	113627265	113643392	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_113627401_113628553_113628714_113632914_113632945_113634152_113634233_113635050_113635131_113640893_113641006_113641352_113641451_113641780_113641865_113642030
transcript_118893.known	chr2	+	1979	7	FSM	ENSG00000144134.19	ENST00000409842.5	1979	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	57.206254514306	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTAAATGTATGTGC	113626841	True	NA	12	True	AGTAAA	-17	NA	113627239	113643392	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_113627401_113628549_113628714_113632914_113632945_113634152_113634233_113641352_113641451_113641780_113641865_113642030
transcript_118897.known	chr2	-	10314	16	FSM	ENSG00000115084.15	ENST00000245680.7	10314	16	0	0	0	0	multi-exon	TRUE	canonical	3	54	junction_7	10.2683981223947	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTAGTCTCTAAGATGT	-113753984	True	NA	53	True	ATTAAA	-26	NA	113756642	113706708	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_113715196_113717752_113717851_113719153_113719309_113723103_113723195_113725377_113725538_113729400_113729506_113731583_113731649_113734585_113734674_113735776_113735859_113742691_113742880_113743712_113743795_113746276_113746340_113750424_113750569_113755164_113755307_113755453_113755545_113756369
transcript_118901.known	chr2	+	6589	12	FSM	ENSG00000115091.12	ENST00000263238.7	6589	12	0	0	0	0	multi-exon	TRUE	canonical	3	931	junction_6	77.805542728901	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCCCAAATAAATTCCTG	113879444	True	NA	NA	False	NA	NA	NA	113890088	113962596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_113890324_113913171_113913228_113916883_113917009_113927344_113927456_113931300_113931397_113934278_113934387_113939958_113940103_113942185_113942360_113951478_113951572_113951719_113951846_113955622_113955707_113957359
transcript_118906.known	chr2	+	2758	26	FSM	ENSG00000175497.17	ENST00000393147.6	2758	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.13030213535226	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGACTGTATTTATACAGAA	115161310	False	NA	NA	False	AAGAAA	-39	NA	115161601	115842345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_115162029_115309238_115309354_115343816_115343913_115499509_115499605_115525897_115525973_115689686_115689740_115689839_115689922_115727815_115727937_115739738_115739894_115746085_115746184_115753173_115753298_115762571_115762611_115768296_115768405_115777207_115777300_115777786_115777835_115780873_115780996_115782351_115782400_115791080_115791180_115791286_115791357_115814792_115814988_115815674_115815730_115836156_115836257_115836506_115836566_115836673_115836747_115840749_115840824_115842210
transcript_118910.known	chr2	-	730	3	FSM	ENSG00000235026.7	ENST00000432658.1	730	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	3	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTATGGTGTACACAGCCC	-115161281	True	NA	0	True	AATAAA	-15	NA	115161343	115144047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_115144369_115144858_115145028_115161103
transcript_118913.known	chr2	+	3753	14	FSM	ENSG00000088205.13	ENST00000263239.7	3753	14	0	0	0	0	multi-exon	FALSE	canonical	3	908	junction_7	95.4757009267574	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCGTTTATGGATGCTT	117799966	True	NA	16	True	ATTAAA	-18	NA	117814690	117832377	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_117814863_117817443_117817729_117819648_117819793_117821160_117821297_117821649_117821751_117821861_117822062_117822146_117822262_117824568_117824709_117824939_117825102_117825446_117825600_117826268_117826383_117828948_117829006_117829288_117829467_117830581
transcript_118922.nic	chr2	+	505	3	ISM	ENSG00000088205.13	ENST00000263239.7	3753	14	-30	12711	-30	-3114	5prime_fragment	FALSE	canonical	3	1036	junction_1	53.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGAAAACAAAGGGAAATCT	117799936	True	NA	NA	False	AAAAAG	-7	NA	117814660	117819666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_117814863_117817443_117817729_117819648
transcript_118923.nic	chr2	+	466	2	ISM	ENSG00000088205.13	ENST00000263239.7	3753	14	-30	14670	-30	-5073	5prime_fragment	FALSE	canonical	3	1036	junction_1	0	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGAATGATGCTGAGCCT	117799936	True	NA	57	True	AAAAAG	-23	NA	117814660	117817707	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_117814863_117817443
transcript_118925.known	chr2	-	6833	24	FSM	ENSG00000125633.11	ENST00000376300.7	6833	24	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_5	11.5211648749427	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGAGACTCTTTCTTGG	-118012137	True	NA	4	True	GATAAA	-16	NA	118014070	117915480	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_117920397_117931036_117931151_117935494_117935580_117936701_117936740_117939028_117939112_117941188_117941298_117944023_117944087_117945528_117945583_117946810_117946883_117948104_117948187_117949321_117949396_117952372_117952436_117958364_117958482_117973907_117973995_117974849_117974901_117975187_117975281_117977993_117978031_117985968_117986070_117995445_117995503_117996263_117996363_118000820_118000933_118006721_118006817_118008544_118008659_118013953
transcript_118931.nic	chr2	-	1891	22	ISM	ENSG00000125633.11	ENST00000376300.7	6833	24	-91	20017	-28	0	5prime_fragment	FALSE	canonical	3	63	junction_3	11.5098301671306	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCAGATGGCTTCTTTT	-118012228	True	NA	NA	False	NA	NA	NA	118014161	117935497	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_117935580_117936701_117936740_117939028_117939112_117941188_117941298_117944023_117944087_117945528_117945583_117946810_117946883_117948104_117948187_117949321_117949396_117952372_117952436_117958364_117958482_117973907_117973995_117974849_117974901_117975187_117975281_117977993_117978031_117985968_117986070_117995445_117995503_117996263_117996363_118000820_118000933_118006721_118006817_118008544_118008659_118013953
transcript_11894.known	chr1	+	2293	6	FSM	ENSG00000173947.14	ENST00000369738.9	2293	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	12.1227059685534	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTAAAACATACTGTGCCA	111346072	True	NA	NA	False	AATAAA	-18	NA	111346621	111353013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_111346672_111346909_111347050_111347673_111347773_111348515_111348647_111350105_111350224_111351258
transcript_118940.known	chr2	+	1500	1	FSM	ENSG00000279227.1	ENST00000623784.1	1500	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTCCCAAATGTGTTGT	118014158	False	NA	2	True	AATAAA	-19	NA	118014173	118015673	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_118014200_118015700
transcript_118941.known	chr2	+	3185	6	FSM	ENSG00000125629.16	ENST00000485520.5	3185	6	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	128.736319661547	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTCAGTTACCTTTATA	118086235	True	NA	2	True	AATAAA	-17	NA	118088473	118110997	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_118088542_118096418_118096427_118103196_118103322_118106736_118106904_118107089_118107190_118108280
transcript_118944.known	chr2	+	3562	6	FSM	ENSG00000125629.16	ENST00000245787.9	3562	6	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	66.3596262798398	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTCAGTTACCTTTATA	118086232	True	NA	2	True	AATAAA	-17	NA	118088470	118110997	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_118088542_118096418_118096801_118103196_118103322_118106736_118106904_118107089_118107190_118108280
transcript_118950.known	chr2	+	574	5	FSM	ENSG00000125629.16	ENST00000411929.5	574	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	127.303525088664	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGGTAGATATACCAACA	118086213	True	NA	NA	False	NA	NA	NA	118088451	118108372	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_118088542_118103196_118103322_118106736_118106904_118107089_118107190_118108280
transcript_118954.known	chr2	-	1905	2	FSM	ENSG00000144119.4	ENST00000272520.4	1905	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTCTGTTGTCTGTATGTC	-119158711	False	NA	-1	True	ATTAAA	-19	NA	119158751	119156242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_119156982_119157585
transcript_118956.known	chr2	+	3915	6	FSM	ENSG00000115107.20	ENST00000393106.6	3915	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	77.3444244920085	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGGCTTTTATTTCTGC	119221528	True	NA	15	True	AATAAA	-19	NA	119223830	119265652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_119223889_119239362_119239431_119245488_119245989_119247678_119248207_119254683_119254849_119263056
transcript_118957.nnic	chr2	+	3950	6	NNC	ENSG00000115107.20	novel	3915	6	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	84.5018342996174	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGGCTTTTATTTCTGC	119221518	True	NA	15	True	AATAAA	-19	NA	119223820	119265652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_119223889_119244423_119244517_119245488_119245989_119247678_119248207_119254683_119254849_119263056
transcript_118958.known	chr2	+	4259	6	FSM	ENSG00000115107.20	ENST00000393110.7	4259	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	82.8072460597501	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGGCTTTTATTTCTGC	119221531	True	NA	15	True	AATAAA	-19	NA	119223833	119265652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_119223889_119230619_119231035_119245488_119245989_119247678_119248207_119254683_119254849_119263056
transcript_118961.known	chr2	+	1871	5	FSM	ENSG00000115107.20	ENST00000393107.2	1871	5	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	22.2864869371554	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGCTTGTGCTGTGGTGGG	119221550	True	NA	NA	False	NA	NA	NA	119223852	119263698	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_119223889_119245488_119245989_119247678_119248207_119254683_119254849_119263056
transcript_118965.known	chr2	-	685	6	FSM	ENSG00000186132.15	ENST00000334816.12	685	6	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_5	9.2520268049763	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGAATATTGATTCTTA	-119366460	True	NA	-13	True	AATAAA	-17	NA	119366834	119302224	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_119302549_119311621_119311704_119317465_119317504_119321153_119321205_119339826_119339972_119366789
transcript_118966.nnic	chr2	-	642	5	NIC	ENSG00000186132.15	novel	685	6	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_3	32.2567822325786	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGAATATTGATTCTTA	-119366468	True	NA	-13	True	AATAAA	-17	NA	119366842	119302224	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_119302549_119311621_119311704_119317465_119317504_119339826_119339972_119366789
transcript_118968.known	chr2	+	576	5	FSM	ENSG00000155368.18	ENST00000409094.5	576	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	2746.19286467648	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGACTTTCCTTGAGTAG	119341050	True	NA	-14	True	GGGGCT	-9	NA	119366988	119372481	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_119367061_119367558_119367645_119368187_119368306_119370739_119370803_119372244
transcript_118969.known	chr2	+	564	4	FSM	ENSG00000155368.18	ENST00000355857.8	564	4	0	0	0	0	multi-exon	FALSE	canonical	3	5479	junction_3	67.4800382006083	1288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTTAGTGATCTGAGTT	119341038	True	NA	48	True	ATTAAA	-21	NA	119366976	119372543	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_119367061_119368187_119368306_119370739_119370803_119372244
transcript_11897.known	chr1	+	3774	5	FSM	ENSG00000173947.14	ENST00000484512.1	3774	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	12.6293309403151	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTAAAACATACTGTGCCA	111346050	True	NA	NA	False	AATAAA	-18	NA	111346599	111353013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_111346672_111346909_111347050_111347673_111347773_111348515_111350224_111351258
transcript_118971.known	chr2	+	654	4	FSM	ENSG00000155368.18	ENST00000535617.5	654	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2619.87798698082	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGATCTGAGTTCTTGAGA	119340985	True	NA	55	True	ATTAAA	-28	NA	119366923	119372550	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_119367091_119368187_119368306_119370739_119370803_119372244
transcript_118972.known	chr2	+	740	5	FSM	ENSG00000155368.18	ENST00000535757.5	740	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2752.29381607415	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGATCTGAGTTCTTGAGA	119340985	True	NA	55	True	ATTAAA	-28	NA	119366923	119372550	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_119367091_119367558_119367645_119368187_119368306_119370739_119370803_119372244
transcript_118973.known	chr2	+	714	5	FSM	ENSG00000155368.18	ENST00000311521.8	714	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2752.29381607415	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGTGATCTGAGTTCTT	119341131	True	NA	51	True	ATTAAA	-24	NA	119367069	119372546	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_119367215_119367558_119367645_119368187_119368306_119370739_119370803_119372244
transcript_118974.known	chr2	+	1687	2	FSM	ENSG00000171227.7	ENST00000306406.5	1687	2	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTCTGCCCAGAAGTAG	119430937	True	NA	10	True	ATTAAA	-18	NA	119431853	119438504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_119431925_119436888
transcript_118977.known	chr2	+	820	2	FSM	ENSG00000171227.7	ENST00000465296.1	820	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTTGAAACGGCTGCCTG	119431173	False	NA	NA	False	GGGGCT	-13	NA	119432089	119437547	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_119432251_119436888
transcript_11898.known	chr1	+	746	5	FSM	ENSG00000173947.14	ENST00000369737.4	746	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	21.2720473861826	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGAGTTGGGTGATTTCA	111346070	True	NA	71	True	NA	NA	NA	111346619	111351563	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_111346672_111346909_111347050_111348515_111348647_111350105_111350224_111351258
transcript_118982.known	chr2	+	1346	2	FSM	ENSG00000144120.13	ENST00000401466.5	1346	2	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	0	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCGTTTTTTTTTTTT	119673314	True	NA	16	True	AATAAA	-16	NA	119679166	119682118	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_119679226_119680831
transcript_118983.known	chr2	+	1363	2	FSM	ENSG00000144120.13	ENST00000272521.7	1363	2	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	0	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCGTTTTTTTTTTTT	119673348	True	NA	16	True	AATAAA	-16	NA	119679200	119682118	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_119679277_119680831
transcript_118984.known	chr2	+	791	2	FSM	ENSG00000144120.13	ENST00000445518.1	791	2	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATCAACACTAACCATCC	119673338	True	NA	NA	False	GGGGCT	-37	NA	119679190	119681195	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_119679618_119680831
transcript_118992.known	chr2	+	11090	27	FSM	ENSG00000088179.9	ENST00000263708.7	11090	27	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_13	19.3667500091564	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAGAAGTTTTGAAGATT	119757842	True	NA	9	True	AATAAA	-22	NA	119759921	119984899	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_119760385_119809836_119809992_119862535_119862644_119877322_119877366_119877463_119877543_119881785_119881831_119882096_119882150_119882502_119882624_119885794_119885883_119900717_119900807_119915178_119915243_119920068_119920242_119926597_119926667_119932423_119932550_119934799_119934959_119945080_119945241_119946340_119946425_119946517_119946575_119951972_119952130_119955156_119955324_119956843_119956935_119957015_119957078_119960806_119960954_119962615_119962745_119965496_119965646_119967836_119967973_119976983
transcript_118999.nic	chr2	+	3276	26	NIC	ENSG00000088179.9	novel	11090	27	NA	NA	-73	-2	combination_of_known_junctions	FALSE	canonical	2	8	junction_12	24.4752936652454	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGGGATATGTGTTGGA	119757769	True	NA	6	True	AATAAA	-15	NA	119759848	119977081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_119760385_119809836_119809992_119862535_119862644_119877322_119877366_119877463_119877543_119881785_119881831_119882096_119882150_119882502_119882624_119885794_119885883_119900717_119900807_119915178_119915243_119920068_119920242_119932423_119932550_119934799_119934959_119945080_119945241_119946340_119946425_119946517_119946575_119951972_119952130_119955156_119955324_119956843_119956935_119957015_119957078_119960806_119960954_119962615_119962745_119965496_119965646_119967836_119967973_119976983
transcript_119.known	SIRV3	+	1807	2	FSM	SIRV3A	SIRV302	1807	2	0	0	0	0	multi-exon	FALSE	canonical	3	906	junction_1	0	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTAACAGGTTCTCAAC	NA	False	NA	NA	False	NA	NA	NA	1963	7822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV3_+_2006_6057
transcript_119006.nnic	chr2	+	3122	25	NIC	ENSG00000088179.9	novel	11090	27	NA	NA	-92	-2	combination_of_known_splicesites	FALSE	canonical	3	10	junction_11	24.0784308735709	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGGGATATGTGTTGGA	119759797	True	NA	6	True	AATAAA	-15	NA	119759829	119977081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_119760385_119809836_119809992_119862535_119862644_119877322_119877366_119877463_119877543_119881785_119881831_119882096_119882150_119882502_119882624_119885794_119885883_119900717_119900807_119915178_119915243_119932423_119932550_119934799_119934959_119945080_119945241_119946340_119946425_119946517_119946575_119951972_119952130_119955156_119955324_119956843_119956935_119957015_119957078_119960806_119960954_119962615_119962745_119965496_119965646_119967836_119967973_119976983
transcript_119025.nic	chr2	+	2417	11	ISM	ENSG00000088179.9	ENST00000263708.7	11090	27	-301	68849	-301	-18910	5prime_fragment	FALSE	canonical	3	87	junction_8	10.3058235963944	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCCAGGTGTGATGATGT	119759532	True	NA	NA	False	NA	NA	NA	119759620	119916050	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_119760385_119809836_119809992_119862535_119862644_119877322_119877366_119877463_119877543_119881785_119881831_119882096_119882150_119882502_119882624_119885794_119885883_119900717_119900807_119915178
transcript_119026.nic	chr2	+	2421	11	ISM	ENSG00000088179.9	ENST00000263708.7	11090	27	-137	68681	-137	-18742	5prime_fragment	FALSE	canonical	3	87	junction_8	10.3058235963944	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGGGTACAGTGGTGG	119759616	False	NA	NA	False	NA	NA	NA	119759784	119916218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_119760385_119809836_119809992_119862535_119862644_119877322_119877366_119877463_119877543_119881785_119881831_119882096_119882150_119882502_119882624_119885794_119885883_119900717_119900807_119915178
transcript_119030.known	chr2	+	6556	25	FSM	ENSG00000115109.14	ENST00000263713.10	6556	25	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_16	97.851707175819	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTGCACTGTTTCT	120009814	True	NA	8	True	AATAAA	-18	NA	120013076	120179119	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_120013211_120019076_120019265_120042005_120042111_120073177_120073221_120074099_120074179_120075475_120075521_120075700_120075754_120076970_120077092_120077228_120077317_120078492_120078582_120087170_120087241_120090346_120090517_120091554_120091662_120093248_120093277_120100243_120100287_120100698_120100815_120127687_120127852_120131617_120131716_120143002_120143132_120146224_120146290_120160880_120160975_120164835_120164911_120167465_120167508_120167876_120168008_120174840
transcript_119032.known	chr2	+	1777	17	FSM	ENSG00000115109.14	ENST00000331393.8	1777	17	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_16	25.7727448091972	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGACAAGGAATCAAGGAAG	120009856	True	NA	NA	False	NA	NA	NA	120013118	120104399	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_120013211_120019076_120019265_120042005_120042111_120073177_120073221_120074099_120074179_120075475_120075521_120075700_120075754_120076970_120077092_120077228_120077317_120078492_120078582_120087170_120087241_120090346_120090517_120091554_120091662_120093248_120093277_120100243_120100287_120100698_120100815_120104059
transcript_119035.known	chr2	-	5922	1	FSM	ENSG00000226479.4	ENST00000426077.3	5922	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCTTTAACTTCTAAGAT	-120222299	True	NA	-8	True	AATAAA	-16	NA	120223400	120217478	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_120217500_120223400
transcript_119036.known	chr2	+	767	6	FSM	ENSG00000144118.14	ENST00000431732.5	767	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	140.254055199841	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATGAGAGAAATCAGAACAAA	120249538	True	NA	NA	False	NA	NA	NA	120252849	120293155	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_120252981_120278617_120278779_120280834_120280908_120285873_120286083_120289579_120289758_120293140
transcript_119037.known	chr2	+	1931	5	FSM	ENSG00000144118.14	ENST00000470417.1	1931	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	121.717911582478	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTTTTTTTTGAATAAAAA	120249563	True	NA	-1	True	AAAACA	-30	NA	120252874	120294676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_120252981_120278617_120278713_120286066_120286083_120289579_120289758_120293140
transcript_119039.known	chr2	+	2247	5	FSM	ENSG00000144118.14	ENST00000272519.10	2247	5	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	56.2910960987615	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTCGGGATTTCAGCCT	120249540	True	NA	33	True	AATAAA	-17	NA	120252851	120294710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_120252981_120278617_120278779_120285873_120286083_120289579_120289758_120293140
transcript_119042.known	chr2	-	9287	15	FSM	ENSG00000115112.8	ENST00000263707.6	9287	15	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_9	5.65008578587574	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTGGCTCAGGCCTTG	-121284623	True	NA	76	True	AATAAA	-19	NA	121285202	121216586	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_121224388_121225561_121225614_121231825_121231969_121234090_121234195_121235220_121235312_121237622_121237717_121237801_121237851_121239557_121239650_121242358_121242470_121246817_121246971_121248163_121248271_121248981_121249088_121249570_121249648_121281119_121281272_121285047
transcript_119045.known	chr2	-	1686	7	FSM	ENSG00000155438.12	ENST00000285814.9	1686	7	0	0	0	0	multi-exon	FALSE	canonical	3	697	junction_3	58.1138728895452	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTAGCTTGTGCCTGTA	-121727080	True	NA	30	True	ATTAAA	-16	NA	121736875	121726944	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_121727913_121728287_121728357_121728476_121728537_121730892_121731105_121732095_121732205_121735612_121735751_121736745
transcript_119063.known	chr2	-	1096	4	FSM	ENSG00000155438.12	ENST00000477693.1	1096	4	0	0	0	0	multi-exon	FALSE	canonical	3	704	junction_3	30.6920185064456	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTATTTTTAGTAGAGA	-121727077	True	NA	NA	False	NA	NA	NA	121736872	121730382	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_121731105_121732095_121732205_121735612_121735751_121736745
transcript_119064.known	chr2	+	1182	2	FSM	ENSG00000236859.8	ENST00000413904.6	1182	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATACCACTTGTGTTATTT	121649773	False	NA	19	True	ACTAAA	-19	NA	121649797	121651535	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_121649912_121650467
transcript_119065.known	chr2	+	1368	2	FSM	ENSG00000236859.8	ENST00000447668.2	1368	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATACCACTTGTGTTATTT	121650057	False	NA	19	True	ACTAAA	-19	NA	121650081	121651535	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_121650382_121650467
transcript_119069.known	chr2	+	3302	6	FSM	ENSG00000211460.12	ENST00000389682.8	3302	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	382.375940665728	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGTCCTCCTTTTCAG	121742239	True	NA	NA	False	ATTAAA	-29	NA	121755650	121767853	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_121755846_121757239_121757334_121758709_121758807_121761408_121761525_121763004_121763085_121765133
transcript_119070.known	chr2	+	2717	6	FSM	ENSG00000211460.12	ENST00000490104.5	2717	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	455.970788538038	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGGTCTTGGAATTCCA	121742251	True	NA	1	True	ATTAAA	-13	NA	121755662	121767179	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_121755846_121757239_121757435_121758709_121758807_121761408_121761525_121763004_121763085_121765133
transcript_119071.known	chr2	+	2843	6	FSM	ENSG00000211460.12	ENST00000467324.5	2843	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	379.195147648279	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTGCTGCTGTAAGAA	121742247	True	NA	31	True	AATAAA	-23	NA	121755658	121767294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_121755954_121757239_121757334_121758709_121758807_121761408_121761525_121763004_121763085_121765133
transcript_119072.known	chr2	+	1436	6	FSM	ENSG00000211460.12	ENST00000409193.1	1436	6	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_1	195.00153845547	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGACTGTTGATGTACTG	121742759	False	NA	NA	False	NA	NA	NA	121756170	121765661	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_121756692_121757239_121757334_121758709_121758807_121761408_121761525_121763004_121763085_121765133
transcript_119073.known	chr2	+	605	5	FSM	ENSG00000211460.12	ENST00000495112.1	605	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	407.398070073976	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGAAAGTAGAGGAAGTG	121742273	True	NA	NA	False	NA	NA	NA	121755684	121765284	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_121755846_121758709_121758807_121761408_121761525_121763004_121763085_121765133
transcript_119074.known	chr2	+	1118	3	FSM	ENSG00000211460.12	ENST00000498545.5	1118	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	488.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGTATTAAGGGATTTA	121742248	True	NA	26	True	ATTAAA	-36	NA	121755659	121765985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_121755846_121763004_121763085_121765133
transcript_119075.known	chr2	+	1018	4	FSM	ENSG00000136732.16	ENST00000259254.9	1018	4	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_2	24.4948974278318	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTCCGAGTCCAACAGTA	126653994	True	NA	15	True	AATAAA	-17	NA	126656157	126696667	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_126656313_126690254_126690312_126693863_126693948_126695945
transcript_119076.known	chr2	+	932	3	FSM	ENSG00000136732.16	ENST00000409836.3	932	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	99.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGCATTCCGAGTCCAACA	126654020	True	NA	12	True	AATAAA	-14	NA	126656183	126696664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_126656313_126693863_126693948_126695945
transcript_119077.known	chr2	+	1341	2	FSM	ENSG00000136732.16	ENST00000484700.2	1341	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTACTTCATCTTGTTTTT	126653969	True	NA	NA	False	AATAAA	-16	NA	126656132	126658767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_126656313_126657606
transcript_119078.known	chr2	-	2487	19	FSM	ENSG00000136717.15	ENST00000316724.10	2487	19	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	81.006782218726	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAACGTGTGTGTATTTGT	-127104260	True	NA	-14	True	GATAAA	-9	NA	127107154	127048031	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127048634_127050420_127050523_127050801_127050913_127051153_127051244_127052254_127052363_127053421_127053446_127053904_127054013_127057472_127057602_127059010_127059156_127062114_127062198_127063570_127063647_127063932_127064019_127068162_127068256_127068923_127069032_127069994_127070091_127070552_127070648_127070761_127070817_127076625_127076707_127106859
transcript_11909.nic	chr1	-	2213	11	NIC	ENSG00000116455.14	novel	2456	10	NA	NA	-36	-385	combination_of_known_junctions	FALSE	canonical	3	67	junction_1	287.367778291165	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTGTCTTTTTTGAAGC	-111445430	True	NA	-23	True	AATAAA	-16	NA	111449292	111440274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_111441390_111441498_111441605_111442024_111442094_111442652_111442762_111443322_111443395_111443866_111443922_111444053_111444125_111447094_111447145_111447434_111447577_111448618_111448805_111449054
transcript_119090.known	chr2	-	2401	16	FSM	ENSG00000136717.15	ENST00000346226.7	2401	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	74.0958538351206	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGTATTTGTTCTCC	-127107150	True	NA	-9	True	GATAAA	-14	NA	127107288	127048026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127048634_127050420_127050523_127050801_127050913_127051153_127051244_127052254_127052363_127057472_127057602_127059010_127059156_127062114_127062198_127063570_127063647_127063932_127064019_127068923_127069032_127069994_127070091_127070552_127070648_127070761_127070817_127076625_127076707_127106859
transcript_119091.known	chr2	-	2365	16	FSM	ENSG00000136717.15	ENST00000351659.7	2365	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	69.9932060195051	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGTATTTGTTCTCC	-127107150	True	NA	-9	True	GATAAA	-14	NA	127107288	127048026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127048634_127050420_127050523_127050801_127050913_127051153_127051244_127052254_127052363_127059010_127059156_127062114_127062198_127063570_127063647_127063932_127064019_127068162_127068256_127068923_127069032_127069994_127070091_127070552_127070648_127070761_127070817_127076625_127076707_127106859
transcript_119097.nic	chr2	-	2435	16	NIC	ENSG00000136717.15	novel	2487	19	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_4	57.8731947162645	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGTATTTGTTCTCC	NA	False	NA	-9	True	GATAAA	-14	NA	127107337	127048026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_127048634_127050420_127050523_127050801_127050913_127051153_127051244_127057472_127057602_127059010_127059156_127062114_127062198_127063570_127063647_127063932_127064019_127068162_127068256_127068923_127069032_127069994_127070091_127070552_127070648_127070761_127070817_127076625_127076707_127106859
transcript_119098.known	chr2	-	2272	15	FSM	ENSG00000136717.15	ENST00000393041.7	2272	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	71.3801264287168	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGTATTTGTTCTCC	-127107150	True	NA	-9	True	GATAAA	-14	NA	127107288	127048026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127048634_127050420_127050523_127050801_127050913_127051153_127051244_127052254_127052363_127059010_127059156_127062114_127062198_127063570_127063647_127063932_127064019_127068923_127069032_127069994_127070091_127070552_127070648_127070761_127070817_127076625_127076707_127106859
transcript_1191.nic	chr1	-	565	5	ISM	ENSG00000248333.9	ENST00000611150.3	2350	19	4	13798	4	-7764	5prime_fragment	FALSE	canonical	3	85	junction_1	11.9869720947369	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGGAGATGGCAAGGGAG	-1652997	True	NA	1	True	GATAAA	-29	NA	1659008	1649535	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_1649638_1652438_1652567_1655368_1655485_1657374_1657499_1658913
transcript_119101.known	chr2	-	2293	15	FSM	ENSG00000136717.15	ENST00000393040.7	2293	15	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	58.2401782908238	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGTATTTGTTCTCC	-127107150	True	NA	-9	True	GATAAA	-14	NA	127107288	127048026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127048634_127050420_127050523_127050801_127050913_127051153_127051244_127057472_127057602_127059010_127059156_127062114_127062198_127063570_127063647_127063932_127064019_127068923_127069032_127069994_127070091_127070552_127070648_127070761_127070817_127076625_127076707_127106859
transcript_119104.nic	chr2	-	2561	15	NIC	ENSG00000136717.15	novel	2365	16	NA	NA	-304	0	combination_of_known_junctions	FALSE	canonical	3	99	junction_4	42.1060371840778	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGTATTTGTTCTCC	NA	False	NA	-9	True	GATAAA	-14	NA	127107592	127048026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_127048634_127050420_127050523_127050801_127050913_127051153_127051244_127059010_127059156_127062114_127062198_127063570_127063647_127063932_127064019_127068162_127068256_127068923_127069032_127069994_127070091_127070552_127070648_127070761_127070817_127076625_127076707_127106859
transcript_119108.known	chr2	-	2143	14	FSM	ENSG00000136717.15	ENST00000409400.1	2143	14	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_8	39.7579957348465	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCAGAAAACGTGTGTGT	-127107265	False	NA	-20	True	GATAAA	-3	NA	127107278	127048037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127048634_127050420_127050523_127050801_127050913_127051153_127051244_127059010_127059156_127062114_127062198_127063570_127063647_127063932_127064019_127068923_127069032_127069994_127070091_127070552_127070648_127070761_127070817_127076625_127076707_127106859
transcript_119109.nic	chr2	-	2179	14	NIC	ENSG00000136717.15	novel	2365	16	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	58.9636333613491	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGTATTTGTTCTCC	-127107287	False	NA	-9	True	GATAAA	-14	NA	127107300	127048026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_127048634_127050420_127050523_127050801_127050913_127059010_127059156_127062114_127062198_127063570_127063647_127063932_127064019_127068162_127068256_127068923_127069032_127069994_127070091_127070552_127070648_127070761_127070817_127076625_127076707_127106859
transcript_11911.nnic	chr1	-	1315	11	NNC	ENSG00000116455.14	novel	2456	10	NA	NA	-35	602	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_1	234.395925732509	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGCTTGCCTGTGTAAT	-111445429	True	NA	-19	True	AATAAA	-3	NA	111449291	111440625	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_111440771_111441210_111441390_111442024_111442094_111442652_111442762_111443322_111443395_111443866_111443922_111444053_111444125_111447094_111447145_111447434_111447577_111448618_111448805_111449054
transcript_119111.known	chr2	-	2074	13	FSM	ENSG00000136717.15	ENST00000348750.8	2074	13	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	58.9634420637059	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGTATTTGTTCTCC	-127107150	True	NA	-9	True	GATAAA	-14	NA	127107288	127048026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127048634_127050420_127050523_127050801_127050913_127059010_127059156_127062114_127062198_127063570_127063647_127063932_127064019_127068923_127069032_127069994_127070091_127070552_127070648_127070761_127070817_127076625_127076707_127106859
transcript_119118.known	chr2	-	2807	16	FSM	ENSG00000163161.14	ENST00000645467.1	2807	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	115.111655940367	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATAAACAGAATGGACCA	-127289119	True	NA	-34	True	TATAAA	-38	NA	127294144	127257319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127257728_127259295_127259449_127261227_127261347_127271335_127271454_127272864_127272962_127279172_127279376_127280446_127280632_127284170_127284290_127286702_127287018_127288659_127288865_127289336_127289502_127289688_127289825_127290223_127290274_127292609_127292847_127293512_127293719_127294053
transcript_119127.known	chr2	-	2345	15	FSM	ENSG00000163161.14	ENST00000644317.1	2345	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	98.6581399147002	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAAGATGCATCAAGGGC	-127289073	True	NA	NA	False	NA	NA	NA	127294098	127257474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127257728_127259295_127259449_127261227_127261347_127271335_127271454_127272864_127272962_127279172_127279376_127280446_127280632_127286702_127287018_127288659_127288865_127289336_127289502_127289688_127289825_127290223_127290274_127292609_127292705_127293512_127293719_127294053
transcript_119128.known	chr2	-	2916	15	FSM	ENSG00000163161.14	ENST00000426778.5	2916	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	101.202892795631	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATTGTACAAGTGTTTT	-127289120	True	NA	-4	True	AATAAA	-23	NA	127294145	127257289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127257728_127259295_127259449_127261227_127261347_127271335_127271454_127272864_127272962_127279172_127279376_127280446_127280632_127286702_127287018_127288659_127288865_127289336_127289502_127289688_127289825_127290223_127290274_127292609_127292847_127293512_127293719_127293856
transcript_119129.known	chr2	-	2718	15	FSM	ENSG00000163161.14	ENST00000285398.7	2718	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	79.007781843542	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATTGTACAAGTGTTTT	-127289119	True	NA	-4	True	AATAAA	-23	NA	127294144	127257289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127257728_127259295_127259449_127261227_127261347_127271335_127271454_127272864_127272962_127279172_127279376_127280446_127280632_127286702_127287018_127288659_127288865_127289336_127289502_127289688_127289825_127290223_127290274_127292609_127292847_127293512_127293719_127294053
transcript_119143.nic	chr2	-	2790	14	NIC	ENSG00000163161.14	novel	2345	15	NA	NA	-11	0	intron_retention	FALSE	canonical	0	0	junction_11	102.291323155483	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGTCTTCATTGTACAAG	-127289152	True	NA	-10	True	AATAAA	-17	NA	127294177	127257295	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_127257728_127259295_127259449_127261227_127261347_127271335_127271454_127272864_127272962_127279172_127279376_127280446_127280632_127286702_127287018_127288659_127288865_127289336_127289825_127290223_127290274_127292609_127292705_127293512_127293719_127294053
transcript_119145.nic	chr2	-	2932	14	NIC	ENSG00000163161.14	novel	2787	16	NA	NA	-11	0	intron_retention	FALSE	canonical	0	0	junction_11	81.3917402726799	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGTCTTCATTGTACAAG	-127289152	True	NA	-10	True	AATAAA	-17	NA	127294177	127257295	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_127257728_127259295_127259449_127261227_127261347_127271335_127271454_127272864_127272962_127279172_127279376_127280446_127280632_127286702_127287018_127288659_127288865_127289336_127289825_127290223_127290274_127292609_127292847_127293512_127293719_127294053
transcript_119148.nic	chr2	-	3331	13	NIC	ENSG00000163161.14	novel	2787	16	NA	NA	-11	0	intron_retention	FALSE	canonical	0	0	junction_10	83.3177902171359	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGTCTTCATTGTACAAG	-127289152	True	NA	-10	True	AATAAA	-17	NA	127294177	127257295	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_127257728_127259295_127259449_127261227_127261347_127271335_127271454_127272864_127272962_127279172_127279376_127280446_127280632_127286702_127287018_127288659_127288865_127289336_127290274_127292609_127292847_127293512_127293719_127294053
transcript_11916.known	chr1	-	2456	10	FSM	ENSG00000116455.14	ENST00000235090.10	2456	10	0	0	0	0	multi-exon	FALSE	canonical	3	645	junction_1	63.5889578115222	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGATCCTCTGGCGT	-111445394	True	NA	-6	True	AGTAAA	-16	NA	111449256	111439889	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_111441390_111442024_111442094_111442652_111442762_111443322_111443395_111443866_111443922_111444053_111444125_111447094_111447145_111447434_111447577_111448618_111448805_111449054
transcript_119171.known	chr2	-	11360	17	FSM	ENSG00000169967.17	ENST00000682094.1	11360	17	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_16	6.72216482987438	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTTTTCCAAATCTATT	-127385889	True	NA	1	True	AATAAA	-24	NA	127387975	127298667	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127307805_127308584_127308763_127314753_127314884_127317628_127317761_127318168_127318318_127322045_127322253_127323901_127323995_127324173_127324242_127325727_127325808_127326686_127326818_127329920_127330009_127330391_127330506_127335869_127335970_127337737_127337779_127338931_127339051_127343125_127343195_127387451
transcript_119175.known	chr2	+	489	3	FSM	ENSG00000236682.3	ENST00000692842.1	559	3	64	6	0	0	multi-exon	FALSE	canonical	3	48	junction_1	11.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGAGATAAATTTTTTCC	127387962	True	NA	9	True	AATAAA	-23	NA	127388241	127389411	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_127388312_127388880_127388999_127389110
transcript_119177.known	chr2	+	615	3	FSM	ENSG00000236682.3	ENST00000654207.2	620	3	0	5	0	-1	multi-exon	FALSE	canonical	1	2	junction_1	34.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAATCTAGAGATAAATTT	127387904	True	NA	4	True	AATAAA	-18	NA	127388183	127389406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_127388385_127388880_127388999_127389110
transcript_119178.nic	chr2	+	1025	4	ISM	ENSG00000115718.18	ENST00000409048.1	1586	7	3390	0	-16	0	3prime_fragment	FALSE	canonical	1	1	junction_2	1.24721912892465	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGGGACATTAAAGGGAC	127423241	True	NA	NA	False	NA	NA	NA	127423271	127428983	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_127423409_127426084_127426228_127427104_127427223_127428356
transcript_119179.known	chr2	+	779	2	FSM	ENSG00000115718.18	ENST00000402125.2	779	2	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCGGCCTGCTGTTCTGTC	127423258	True	NA	NA	False	ATTAAA	-18	NA	127423288	127429015	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_127423409_127428356
transcript_119181.known	chr2	-	2973	14	FSM	ENSG00000163166.15	ENST00000295321.9	2973	14	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_12	48.5418138547345	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGGCTGTCTCTTCA	-127520590	True	NA	-9	True	AATAAA	-15	NA	127526489	127480811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127481176_127486552_127486665_127489178_127489236_127489831_127489944_127491970_127492089_127493280_127493411_127494871_127494955_127495997_127496149_127498139_127498238_127502814_127502873_127503386_127503577_127504683_127505753_127523675_127523792_127526174
transcript_119189.nic	chr2	-	1900	7	NIC	ENSG00000163166.15	novel	2973	14	NA	NA	-28	4437	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	214.500194250106	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTAAGTTTGTTTTTAAGG	-127520618	True	NA	NA	False	CATAAA	-11	NA	127526517	127498141	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_127498238_127502814_127502873_127503386_127503577_127504683_127505753_127506691_127506720_127523675_127523792_127526174
transcript_119192.nic	chr2	-	1701	5	NIC	ENSG00000163166.15	novel	608	4	NA	NA	-34	-859	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	230.001086953953	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAGAAGGATCTGTTTG	-127526341	False	NA	NA	False	AAGAAA	-3	NA	127526523	127503437	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_127503577_127504683_127505753_127506691_127506720_127523675_127523792_127526174
transcript_119195.known	chr2	-	608	4	FSM	ENSG00000163166.15	ENST00000436740.1	608	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	217.317484084666	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGCGACTCTGAGAGTGA	-127520541	True	NA	NA	False	NA	NA	NA	127526440	127505554	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127505753_127506691_127506720_127523675_127523792_127526174
transcript_119198.known	chr2	-	1080	3	FSM	ENSG00000163166.15	ENST00000409725.1	1080	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	195	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCGGAAAATGAGGAGCTAC	NA	False	NA	NA	False	NA	NA	NA	127526886	127505039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127505753_127523675_127523792_127526635
transcript_119200.known	chr2	-	2111	10	FSM	ENSG00000072163.20	ENST00000324938.9	2111	10	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_9	3.22413736189931	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGCAGCCTGCGTGGTT	-127664498	True	NA	-4	True	AATGAA	-16	NA	127664546	127638425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127639429_127640069_127640146_127640269_127640319_127640895_127640989_127642048_127642200_127642922_127643073_127654423_127654545_127654829_127654897_127657402_127657563_127664305
transcript_119201.known	chr2	-	2387	10	FSM	ENSG00000072163.20	ENST00000355119.9	2387	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	3.22413736189931	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGCAGCCTGCGTGGTT	-127675507	True	NA	-4	True	AATGAA	-16	NA	127675530	127638425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127639429_127640069_127640146_127640269_127640319_127640895_127640989_127642048_127642200_127642922_127643073_127654423_127654545_127654829_127654897_127657402_127657563_127675013
transcript_119212.known	chr2	-	9490	22	FSM	ENSG00000136709.12	ENST00000322313.9	9490	22	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_15	64.5371801293457	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAGACCTGTGTAACTCA	-127795429	True	NA	-6	True	AATAAA	-19	NA	127811171	127701026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127706553_127708676_127708893_127709489_127709583_127709692_127709857_127713582_127714022_127717154_127717264_127719264_127720354_127721835_127721989_127722590_127722731_127722957_127723045_127723252_127723348_127724332_127724444_127724886_127724966_127725060_127725216_127726650_127726778_127763061_127763160_127764827_127764980_127765173_127765270_127768188_127768294_127768932_127769002_127770777_127771005_127811011
transcript_119226.nic	chr2	-	1801	15	ISM	ENSG00000136709.12	ENST00000322313.9	9490	22	-9	20871	7	4754	5prime_fragment	FALSE	canonical	3	140	junction_8	71.6976360866114	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAAGCAGAAATTGAGCAA	-127795438	True	NA	NA	False	ATTAAA	-20	NA	127811180	127721897	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_127721989_127722590_127722731_127722957_127723045_127723252_127723348_127724332_127724444_127724886_127724966_127725060_127725216_127726650_127726778_127763061_127763160_127764827_127764980_127765173_127765270_127768188_127768294_127768932_127769002_127770777_127771005_127811011
transcript_119232.known	chr2	-	3104	6	FSM	ENSG00000136709.12	ENST00000409658.7	3104	6	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_5	23.9115035077261	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATAATTAATAAACCTCT	-127795429	True	NA	-40	True	NA	NA	NA	127811171	127762532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127764980_127765173_127765270_127768188_127768294_127768932_127769002_127770777_127771005_127811011
transcript_119243.known	chr2	-	806	4	FSM	ENSG00000144231.11	ENST00000409698.1	806	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	486.523038166402	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCACACTGTTGACTACCT	-127848146	False	NA	NA	False	NA	NA	NA	127857949	127847840	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127848186_127850589_127850686_127852924_127853106_127857765
transcript_119248.nnic	chr2	-	1744	3	NIC	ENSG00000144231.11	novel	5038	4	NA	NA	7	40	combination_of_known_splicesites	FALSE	canonical	3	137	junction_2	448.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTTACTTC	-127848345	True	NA	0	True	AATAAA	-23	NA	127858148	127846658	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_127848186_127850589_127850686_127858027
transcript_119249.known	chr2	-	1037	2	FSM	ENSG00000144231.11	ENST00000487079.1	1037	2	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGCCCATAGCCCCTTGA	-127848316	True	NA	NA	False	NA	NA	NA	127858119	127847240	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127848186_127858027
transcript_119251.known	chr2	-	5038	4	FSM	ENSG00000144231.11	ENST00000272645.9	5038	4	0	0	0	0	multi-exon	FALSE	canonical	3	954	junction_3	41.4085337420521	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGGTGTCAGATAATTTT	-127848352	True	NA	NA	False	AATAAA	-16	NA	127858155	127843552	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127848186_127850589_127850686_127852924_127853106_127858027
transcript_119252.known	chr2	-	1758	3	FSM	ENSG00000144231.11	ENST00000409955.1	1758	3	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	396	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTCTGGAGAAAAATAAAAT	-127848314	True	NA	-40	True	AAGAAA	-5	NA	127858117	127846698	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127848186_127852924_127853106_127858027
transcript_119253.known	chr2	-	4803	9	FSM	ENSG00000144233.11	ENST00000681313.1	4803	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	28.1324990002666	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATAAAAATCGTTTTGTTC	-127885818	False	202	NA	False	AATAAA	-8	NA	127885945	127861638	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127865206_127866899_127866997_127867144_127867280_127869453_127869541_127870813_127870929_127871248_127871360_127873827_127874273_127884202_127884313_127885809
transcript_119256.known	chr2	-	4692	8	FSM	ENSG00000144233.11	ENST00000272647.10	4692	8	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	10.3706808073609	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTTTTGTTCTGCTTTTTC	-127885829	False	NA	NA	False	AATAAA	-17	NA	127885956	127861629	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127865206_127866899_127866997_127869453_127869545_127870813_127870929_127871248_127871360_127873827_127874273_127884202_127884313_127885809
transcript_119262.known	chr2	-	4567	7	FSM	ENSG00000144233.11	ENST00000680886.1	4567	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	23.4004985701872	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCATAATGGATAAAAAT	-127885834	False	NA	NA	False	NA	NA	NA	127885961	127861648	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127865206_127866899_127866997_127869453_127869545_127870813_127870929_127873827_127874273_127884202_127884313_127885809
transcript_119267.known	chr2	-	4349	5	FSM	ENSG00000144233.11	ENST00000679574.1	4349	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	27.7972570589258	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAATGGATAAAAATCGTT	-127885818	False	202	NA	False	AATAAA	-2	NA	127885945	127861644	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127865206_127866899_127866997_127873827_127874273_127884202_127884313_127885809
transcript_11927.known	chr1	+	2628	7	FSM	ENSG00000116459.11	ENST00000369722.8	2628	7	0	0	0	0	multi-exon	FALSE	canonical	3	2551	junction_3	79.2178781729366	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGTTTGTGCTAAGCAAC	111427426	True	NA	NA	False	ATTAAA	-18	NA	111449463	111462773	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_111449582_111449836_111449874_111454210_111454357_111456085_111456250_111456629_111456756_111459456_111459637_111460916
transcript_119272.known	chr2	-	4173	21	FSM	ENSG00000136715.19	ENST00000357702.9	4173	21	0	0	0	0	multi-exon	TRUE	canonical	2	44	junction_20	36.7203962396922	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTTTGCATCTTTTTGTA	-128021554	False	5741	-2	True	AATAAA	-27	NA	128027295	127941216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127942165_127942423_127942538_127945455_127945560_127949868_127949995_127950159_127950409_127954985_127955345_127977984_127978090_127986784_127986963_127989563_127989867_127993186_127993309_127996349_127996492_127999740_127999846_128000055_128000147_128000306_128000455_128010268_128010394_128013029_128013155_128014802_128014915_128016388_128016548_128017679_128017916_128026180_128026299_128027091
transcript_119273.known	chr2	-	4140	21	FSM	ENSG00000136715.19	ENST00000259234.10	4140	21	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_8	40.7527913154424	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGCGCAGTTTGCATCT	-128022379	False	NA	-9	True	AATAAA	-20	NA	128028120	127941223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127942165_127942423_127942538_127945455_127945560_127949868_127949995_127950159_127950409_127954985_127955345_127977984_127978090_127986784_127986960_127989563_127989867_127993186_127993309_127996349_127996492_127999740_127999846_128000055_128000147_128000306_128000455_128010268_128010394_128013029_128013155_128014802_128014915_128016388_128016548_128017679_128017916_128026180_128026299_128027939
transcript_119276.known	chr2	-	4065	20	FSM	ENSG00000136715.19	ENST00000259235.7	4065	20	0	0	0	0	multi-exon	FALSE	canonical	2	44	junction_19	43.6209434056751	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCAGTTTGCATCTTTTTGT	-128021552	False	5741	-3	True	AATAAA	-26	NA	128027293	127941217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_127942165_127942423_127942538_127945455_127945560_127949868_127949995_127950159_127950409_127954985_127955345_127986784_127986963_127989563_127989867_127993186_127993309_127996349_127996492_127999740_127999846_128000055_128000147_128000306_128000455_128010268_128010394_128013029_128013155_128014802_128014915_128016388_128016548_128017679_128017916_128026180_128026299_128027091
transcript_119277.nic	chr2	-	4040	20	NIC	ENSG00000136715.19	novel	4084	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	63	junction_6	32.7935707502016	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCGCAGTTTGCATCTTT	-128022379	False	NA	-7	True	AATAAA	-22	NA	128028120	127941221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_127942165_127942423_127942538_127945455_127945560_127949868_127949995_127950159_127950409_127954985_127955345_127986784_127986963_127989563_127989867_127993186_127993309_127996349_127996492_127999740_127999846_128000055_128000147_128000306_128000455_128010268_128010394_128013029_128013155_128014802_128014915_128016388_128016548_128017679_128017916_128026180_128026299_128027939
transcript_119284.known	chr2	+	10761	41	FSM	ENSG00000136731.13	ENST00000259253.11	10761	41	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	18.7281706260916	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGCAGTCATTTGGCCTT	128082173	True	NA	39	True	AGTAAA	-22	NA	128091199	128195677	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_128091416_128097428_128097565_128103931_128104015_128107937_128108069_128109633_128109747_128113083_128113259_128115123_128115221_128116264_128116344_128120355_128120457_128121198_128121299_128123185_128123247_128127360_128127453_128129028_128129180_128133140_128133261_128134875_128134962_128138716_128138853_128143093_128143226_128145802_128145968_128152783_128152905_128155488_128155588_128156391_128156416_128157251_128157347_128159513_128159721_128160459_128160592_128161137_128161269_128164729_128164826_128170287_128170391_128171204_128171285_128172572_128172763_128173780_128173940_128174772_128174859_128176813_128176899_128177831_128177921_128178467_128178570_128179785_128179871_128180889_128181073_128182129_128182291_128183674_128183790_128186682_128186800_128187448_128187615_128189716
transcript_119297.known	chr2	-	400	3	FSM	ENSG00000214100.9	ENST00000433290.6	407	3	5	2	-1	0	multi-exon	FALSE	canonical	2	5	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGTGTCTGCTGACAG	-129934276	True	NA	NA	False	AATAAA	-18	NA	129934317	129922862	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_129923000_129923557_129923682_129934178
transcript_1193.nic	chr1	-	685	5	ISM	ENSG00000248333.9	ENST00000611150.3	2350	19	-188	13870	-188	-7836	5prime_fragment	FALSE	canonical	3	85	junction_1	11.9869720947369	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGCACGAACGTCGGAAA	-1659182	False	18	17	True	AAAAAG	-4	NA	1659200	1649607	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_1649638_1652438_1652567_1655368_1655485_1657374_1657499_1658913
transcript_119302.known	chr2	-	1329	8	FSM	ENSG00000152076.19	ENST00000409943.8	1329	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	16.327015298928	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	-130145081	False	NA	NA	False	AATAAA	-17	NA	130145112	130139286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_130139691_130139890_130139948_130140022_130140097_130140178_130140372_130141157_130141297_130142132_130142184_130143268_130143314_130144746
transcript_119304.known	chr2	-	1549	8	FSM	ENSG00000152076.19	ENST00000310463.10	1549	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	16.4564980032391	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	-130145103	False	NA	NA	False	AATAAA	-17	NA	130145134	130139286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_130139691_130139890_130139948_130140022_130140097_130140178_130140372_130141157_130141297_130142132_130142382_130143268_130143314_130144746
transcript_119312.known	chr2	-	4896	20	FSM	ENSG00000136699.20	ENST00000409031.5	4896	20	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_9	202.596456286192	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTCTGGCACCTGGGCT	NA	False	NA	NA	False	AATAAA	-17	NA	130182750	130151408	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_130152885_130153042_130153172_130153318_130153451_130153701_130153936_130154276_130154483_130155095_130155260_130156034_130156136_130156584_130156676_130157250_130157397_130161185_130161273_130164373_130164446_130167457_130167591_130172348_130172501_130172624_130172678_130172786_130172896_130173278_130173355_130173513_130173657_130174913_130175001_130176553_130176638_130181529
transcript_119319.known	chr2	-	3661	19	FSM	ENSG00000136699.20	ENST00000351288.10	3661	19	0	0	0	0	multi-exon	FALSE	canonical	3	543	junction_6	63.3448576259693	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTCTGGCACCTGGGCTC	-130168306	True	NA	NA	False	AATAAA	-18	NA	130181601	130151407	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_130152885_130153042_130153172_130153318_130153451_130153701_130153936_130154276_130154483_130155095_130155260_130156034_130156136_130156584_130156676_130157250_130157397_130164373_130164446_130167457_130167591_130172348_130172501_130172624_130172678_130172786_130172896_130173278_130173355_130173513_130173657_130174913_130175001_130176553_130176638_130181529
transcript_119320.known	chr2	-	3768	19	FSM	ENSG00000136699.20	ENST00000680679.1	3768	19	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_8	161.287958495219	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAATAAACATGTCCTTGC	-130168301	True	NA	NA	False	AATGAA	-20	NA	130181596	130151433	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_130152885_130153042_130153172_130153318_130153451_130153701_130153936_130154276_130154483_130155095_130155260_130156034_130156136_130156584_130156814_130157250_130157397_130164373_130164446_130167457_130167591_130172348_130172501_130172624_130172678_130172786_130172896_130173278_130173355_130173513_130173657_130174913_130175001_130176553_130176638_130181529
transcript_11933.known	chr1	+	1040	6	FSM	ENSG00000116459.11	ENST00000369721.8	1040	6	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_2	1033.70583823446	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTTTTTCAAGTTGTATAA	111427427	True	NA	15	True	AATAAA	-20	NA	111449464	111461332	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_111449582_111449836_111449874_111456085_111456250_111456629_111456756_111459456_111459637_111460916
transcript_119330.known	chr2	-	3614	17	FSM	ENSG00000136699.20	ENST00000431183.6	3614	17	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_14	169.547744013301	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGTCTCTAGGAGGTTC	-130181744	False	NA	NA	False	AATAAA	-34	NA	130181757	130151391	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_130152885_130153042_130153172_130153318_130153451_130153701_130153936_130154276_130154483_130155095_130155260_130156034_130156136_130156584_130156676_130157250_130157397_130164373_130164446_130167457_130167591_130172348_130172501_130172624_130172678_130172786_130172896_130174913_130175001_130176553_130176638_130181529
transcript_11934.known	chr1	+	859	6	FSM	ENSG00000116459.11	ENST00000468818.1	859	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1072.83985757428	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTGACAATTGAATGAAACA	111427447	True	NA	-5	True	TTTAAA	-31	NA	111449484	111461312	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_111449582_111449836_111449874_111456226_111456250_111456629_111456756_111459456_111459637_111460916
transcript_119341.known	chr2	+	455	3	FSM	ENSG00000152082.15	ENST00000425361.5	455	3	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	857.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGTCCAGGTCAGATGTT	130181059	True	NA	27	True	AATAAA	-16	NA	130181736	130190713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_130181798_130182626_130182776_130190468
transcript_119342.known	chr2	+	435	3	FSM	ENSG00000152082.15	ENST00000457492.5	435	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	884	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTTTCTGAGATGCAGA	130181094	False	NA	9	True	NA	NA	NA	130181771	130190695	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_130181831_130182626_130182776_130190468
transcript_119344.known	chr2	+	599	3	FSM	ENSG00000152082.15	ENST00000281871.11	599	3	0	0	0	0	multi-exon	FALSE	canonical	3	1799	junction_2	32	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTGTCTACCGTTTTTT	130170275	True	NA	41	True	AATAAA	-30	NA	130182261	130190727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_130182453_130182626_130182776_130190468
transcript_119347.known	chr2	+	583	2	FSM	ENSG00000152082.15	ENST00000485869.1	583	2	0	0	0	0	multi-exon	FALSE	canonical	3	1863	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGACAGGGTGAGATCCT	130170428	False	NA	NA	False	NA	NA	NA	130182414	130183171	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_130182453_130182626
transcript_119350.known	chr2	+	401	2	FSM	ENSG00000152082.15	ENST00000455239.1	401	2	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTCTACCGTTTTTTTT	130170326	True	NA	43	True	AATAAA	-32	NA	130182312	130190729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_130182453_130190468
transcript_119352.known	chr2	+	480	2	FSM	ENSG00000152082.15	ENST00000480182.1	480	2	0	0	0	0	multi-exon	FALSE	canonical	3	1799	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTGTCTACCGTTTTTT	130182447	True	NA	41	True	AATAAA	-30	NA	130182554	130190727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_130182776_130190468
transcript_119353.known	chr2	+	603	3	FSM	ENSG00000152082.15	ENST00000651060.1	603	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	893.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGAGATGCAGAGGGT	130170237	True	NA	13	True	AATAAA	-2	NA	130182223	130190699	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_130182447_130182626_130182776_130190468
transcript_119354.known	chr2	+	769	4	FSM	ENSG00000152082.15	ENST00000409255.1	769	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	875.87302479044	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGGTCCAGGTCAGATGT	130170270	True	NA	26	True	AATAAA	-15	NA	130182256	130190712	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_130182453_130182626_130182776_130183786_130183967_130190468
transcript_119355.known	chr2	-	1847	6	FSM	ENSG00000136710.10	ENST00000442217.5	1847	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	117.589115142516	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTGTGTTTTTTGATC	-130342170	False	NA	0	True	AGTAAA	-21	NA	130342349	130338242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_130339233_130339559_130339763_130340907_130341040_130341666_130341750_130341840_130341945_130342014
transcript_119357.known	chr2	-	2063	6	FSM	ENSG00000136710.10	ENST00000651709.1	2063	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	125.356132678062	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAACCACTACCCAACTT	-130342520	True	NA	-15	True	AGTAAA	-6	NA	130342699	130338257	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_130339233_130339559_130339763_130340907_130341040_130341666_130341750_130341840_130341945_130342133
transcript_11936.nic	chr1	+	1558	9	NIC	ENSG00000116473.15	novel	5101	9	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_6	83.2690481211356	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGTTTGTGTGTTTTTG	111617512	True	NA	25	True	ATTAAA	-40	NA	111619785	111713113	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_111619935_111691333_111691418_111695340_111695410_111697440_111697498_111703335_111703477_111704342_111704487_111706662_111706778_111709148_111709265_111712430
transcript_119361.known	chr2	-	1769	5	FSM	ENSG00000136710.10	ENST00000259229.7	1769	5	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_4	21.4592637338749	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCTTGAACTTTAACATAA	-130338985	True	NA	NA	False	AATACA	-20	NA	130342164	130337932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_130339233_130340907_130341040_130341666_130341750_130341840_130341945_130342014
transcript_119362.nnic	chr2	-	1434	5	NNC	ENSG00000136710.10	novel	1769	5	NA	NA	3	2	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_4	111.747483193135	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTGTTTTTTGATCAT	-130338982	True	NA	2	True	AGTAAA	-23	NA	130342161	130338240	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_130339233_130340907_130341040_130341666_130341750_130341840_130341945_130342038
transcript_119363.known	chr2	-	1247	5	FSM	ENSG00000136710.10	ENST00000409127.1	1247	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	112.174807777861	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTTTTCTGTTCTGGGA	-130342145	False	NA	NA	False	NA	NA	NA	130342324	130338495	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_130339233_130340907_130341040_130341666_130341750_130341840_130341945_130342133
transcript_11937.nic	chr1	+	1551	9	FSM	ENSG00000116473.15	ENST00000687939.1	5101	9	-5	3555	-5	0	multi-exon	FALSE	canonical	2	12	junction_2	82.479921799187	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGTTTGTGTGTTTTTG	111617498	True	NA	25	True	ATTAAA	-40	NA	111619771	111713113	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_111619935_111627469_111627564_111691333_111691418_111695340_111695410_111697440_111697498_111703335_111703477_111704342_111704487_111709148_111709265_111712430
transcript_11938.known	chr1	+	5024	8	FSM	ENSG00000116473.15	ENST00000369709.4	5018	8	-6	0	6	0	multi-exon	FALSE	canonical	3	169	junction_1	12.328828005938	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGTGTGACTCTTATTT	111617509	True	NA	8	True	AATAAA	-16	NA	111619782	111716691	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_111619935_111691333_111691418_111695340_111695410_111697440_111697498_111703335_111703477_111704342_111704487_111709148_111709265_111712430
transcript_119382.known	chr2	+	924	9	FSM	ENSG00000136718.10	ENST00000428740.5	924	9	0	0	0	0	multi-exon	FALSE	canonical	2	55	junction_3	371.317060441612	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACACTCACCACTCAGTC	130336252	True	NA	NA	False	NA	NA	NA	130342923	130346467	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_130342963_130343085_130343195_130344628_130344726_130345375_130345486_130345566_130345700_130345778_130345934_130346017_130346113_130346200_130346275_130346355
transcript_119387.known	chr2	+	2411	9	FSM	ENSG00000136718.10	ENST00000259239.8	2411	9	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_1	148.915034499543	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCATGTGTGATATGCTGT	130336225	True	NA	NA	False	ATTAAA	-23	NA	130342896	130347967	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_130342936_130343085_130343195_130344628_130344713_130345375_130345486_130345566_130345700_130345778_130345934_130346017_130346113_130346200_130346275_130346355
transcript_119388.known	chr2	+	2379	8	FSM	ENSG00000136718.10	ENST00000460766.5	2379	8	0	0	0	0	multi-exon	FALSE	canonical	3	867	junction_3	63.539478327434	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTGTGGTATTTTGT	130336250	True	NA	21	True	AATAAA	-19	NA	130342921	130347810	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_130343195_130344628_130344713_130345375_130345486_130345566_130345700_130345778_130345934_130346017_130346113_130346200_130346275_130346355
transcript_119390.nic	chr2	+	2201	16	NIC	ENSG00000072135.13	novel	3616	15	NA	NA	-19	0	combination_of_known_junctions	TRUE	canonical	2	14	junction_2	27.0461334266718	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGAGGTCTGTTTTTCCT	130355447	True	NA	11	True	AATAAA	-17	NA	130356025	130375405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_130356201_130358866_130358976_130359232_130359310_130359396_130359493_130359607_130359647_130369132_130369202_130369764_130369828_130370047_130370191_130370556_130370624_130370704_130370783_130370874_130370965_130371198_130371288_130372256_130372484_130372872_130372948_130373156_130373221_130374665
transcript_119392.known	chr2	+	3616	15	FSM	ENSG00000072135.13	ENST00000175756.10	3616	15	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	26.7197282462045	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGAGGTCTGTTTTTCCT	130355477	True	NA	11	True	AATAAA	-17	NA	130356055	130375405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_130356201_130358866_130358976_130359232_130359310_130359396_130359493_130359607_130359647_130369132_130369202_130369764_130369828_130370047_130370191_130370556_130370624_130370704_130370783_130370874_130370965_130371198_130371288_130372256_130372484_130372872_130372948_130373156
transcript_1194.nnic	chr1	-	462	5	NNC	ENSG00000248333.9	novel	881	9	NA	NA	-3	-7836	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	41.4268934389244	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGCACGAACGTCGGAAA	-1652996	True	NA	17	True	AAAAAG	-4	NA	1659007	1649607	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_1649638_1652468_1652567_1655368_1655485_1657374_1657499_1658913
transcript_11940.known	chr1	+	2817	12	FSM	ENSG00000064703.13	ENST00000680518.1	2817	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	81.7728157056473	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTAAAAAGATGACATATA	111751683	True	NA	-47	True	AAGAAA	-2	NA	111755929	111767197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_111756226_111756645_111756741_111759399_111759569_111760473_111760589_111760705_111760849_111760986_111761126_111761225_111761285_111762254_111762338_111762676_111762783_111762905_111763008_111764401_111764451_111765736
transcript_119404.nic	chr2	+	3434	12	NIC	ENSG00000072135.13	novel	3616	15	NA	NA	-19	0	intron_retention	FALSE	canonical	3	11	junction_2	26.5398499687477	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGAGGTCTGTTTTTCCT	130355447	True	NA	11	True	AATAAA	-17	NA	130356025	130375405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_130356201_130358866_130358976_130369132_130369202_130369764_130369828_130370047_130370191_130370556_130370624_130370704_130370783_130370874_130370965_130371198_130371288_130372256_130372484_130372872_130372948_130373156
transcript_119406.known	chr2	+	2472	11	FSM	ENSG00000072135.13	ENST00000347849.7	2472	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	28.5203436164433	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTGTGGACAAATCTCCA	130355466	True	NA	10	True	AATAAA	-22	NA	130356044	130374571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_130356201_130369132_130369202_130369764_130369828_130370047_130370191_130370556_130370624_130370704_130370783_130370874_130370965_130371198_130371288_130372256_130372484_130372872_130372948_130373156
transcript_119409.known	chr2	+	460	4	FSM	ENSG00000072135.13	ENST00000489215.5	460	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	45.5802101306648	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGACAGAGCATGGAGGGG	130355476	True	NA	NA	False	NA	NA	NA	130356054	130370229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_130356201_130369132_130369202_130369764_130369828_130370047
transcript_119410.known	chr2	+	1717	2	FSM	ENSG00000072135.13	ENST00000462321.1	1717	2	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTGTTAAAAGAAATAAAAGG	130372466	False	NA	-28	True	GATAAA	-12	NA	130372607	130374533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_130372948_130373156
transcript_119412.known	chr2	-	564	6	FSM	ENSG00000178162.8	ENST00000438056.1	564	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	58.0082752717231	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACAACCCAGTACTGGAAT	-130427173	True	NA	NA	False	NA	NA	NA	130427742	130419158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_130419246_130425090_130425159_130425464_130425612_130425913_130426039_130426165_130426264_130427703
transcript_119413.known	chr2	-	603	6	FSM	ENSG00000178162.8	ENST00000433703.5	603	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_4	37.7910042205814	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGAAGTAGTCTCAAAGG	-130427206	True	NA	NA	False	AATAGA	-14	NA	130427775	130418233	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_130418299_130419070_130419246_130425090_130425159_130425913_130426039_130426165_130426264_130427703
transcript_119416.nic	chr2	-	3648	5	NIC	ENSG00000178162.8	novel	603	6	NA	NA	-388	5	intron_retention	FALSE	canonical	3	50	junction_3	42.1863425767155	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTCGTTGTCATTA	-130428479	True	NA	NA	False	AATAAA	-19	NA	130428564	130416749	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_130419246_130425090_130425159_130425913_130426039_130426165_130426264_130427703
transcript_119417.known	chr2	-	555	5	FSM	ENSG00000178162.8	ENST00000423905.5	555	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	49.7267533627523	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTACTTAGAGATGAATGAA	-130427173	True	NA	NA	False	NA	NA	NA	130427742	130418150	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_130418299_130419070_130419246_130425090_130425159_130425913_130426039_130427703
transcript_119418.nnic	chr2	-	2746	5	NIC	ENSG00000178162.8	novel	603	6	NA	NA	-388	0	intron_retention	FALSE	canonical	3	20	junction_3	50.0268677812233	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGAGTGGTCGTTGT	-130428479	True	NA	NA	False	AATAAA	-14	NA	130428564	130416754	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_130418299_130419070_130419246_130425090_130425159_130426165_130426264_130427703
transcript_11942.known	chr1	+	5375	11	FSM	ENSG00000064703.13	ENST00000681559.1	5375	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	63.9547496281551	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGCATCAATGATTAAAAT	111751656	True	NA	-31	True	NA	NA	NA	111755902	111769760	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_111756226_111756645_111756741_111759399_111759569_111760473_111760589_111760705_111760866_111760986_111761126_111761225_111761285_111762254_111762338_111762676_111762783_111762905_111763008_111765736
transcript_119421.nic	chr2	-	3614	4	NIC	ENSG00000178162.8	novel	555	5	NA	NA	-452	5	intron_retention	FALSE	canonical	3	22	junction_3	57.2013985843004	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTCGTTGTCATTA	-130428611	False	NA	NA	False	AATAAA	-19	NA	130428628	130416749	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_130419246_130425090_130425159_130425913_130426039_130427703
transcript_119423.known	chr2	-	2070	4	FSM	ENSG00000178162.8	ENST00000424873.5	2070	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	47.5067246701863	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGAGTGGTCGTTGT	-130427969	False	NA	NA	False	AATAAA	-14	NA	130427986	130416754	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_130418299_130419070_130419246_130425090_130425159_130427703
transcript_119427.nic	chr2	-	3404	3	NIC	ENSG00000178162.8	novel	2070	4	NA	NA	-367	5	intron_retention	FALSE	canonical	3	44	junction_2	58	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTCGTTGTCATTA	-130428526	False	NA	NA	False	AATAAA	-19	NA	130428543	130416749	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_130419246_130425090_130425159_130427703
transcript_119429.nnic	chr2	+	2849	6	NNC	ENSG00000240253.6	novel	2692	6	NA	NA	-319	288	intron_retention	FALSE	canonical	3	38	junction_2	9.98799279134702	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTCGTTGTCATTA	130692838	True	NA	NA	False	AATAAA	-19	NA	130692962	130704749	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_130693797_130695236_130695335_130695466_130695592_130696341_130696410_130702253_130702429_130703200
transcript_119431.known	chr2	+	573	5	FSM	ENSG00000240253.6	ENST00000425151.5	573	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	8.8423695919137	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTGAGGCCCCAAAGTCT	130693574	True	NA	NA	False	NA	NA	NA	130693734	130702473	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_130693797_130695236_130695335_130695466_130695592_130696341_130696410_130702253
transcript_119439.known	chr2	+	6735	14	FSM	ENSG00000136002.20	ENST00000409359.7	6735	14	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	12.2672412179997	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGCTAGCCCGTTTT	130835903	True	NA	9	True	AATAAA	-15	NA	130836913	131047253	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_130836993_130913985_130917499_130930951_130931258_130946508_130946636_131027944_131028085_131038852_131039033_131040015_131040193_131040260_131040441_131041229_131041463_131041814_131041945_131043451_131043584_131044298_131044543_131045368_131045447_131046037
transcript_11944.known	chr1	+	3486	10	FSM	ENSG00000064703.13	ENST00000680317.1	3486	10	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_6	11.7672909287766	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGGGTCATCAGTTGC	111751669	True	NA	NA	False	ATTAAA	-2	NA	111755915	111767562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_111756226_111756645_111756741_111759399_111759569_111760473_111760589_111760705_111760849_111760986_111761126_111761225_111761285_111762254_111762783_111762905_111763008_111765736
transcript_11945.nnic	chr1	+	2711	10	NIC	ENSG00000064703.13	novel	2688	10	NA	NA	-7	0	combination_of_known_splicesites	TRUE	canonical	2	9	junction_5	66.4665515062712	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAATAGATTTGATTAGTAA	111755606	False	NA	-1	True	AATAAA	-2	NA	111755893	111767243	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_111756226_111756645_111756741_111759399_111759569_111760473_111760589_111760705_111760849_111761225_111761285_111762254_111762338_111762676_111762783_111762905_111763008_111765736
transcript_119450.nic	chr2	+	2867	10	Fusion	ENSG00000284479.1_ENSG00000136002.20	novel	3229	7	NA	NA	20	0	multi-exon	FALSE	canonical	3	14	junction_1	14.360439485692	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGCTAGCCCGTTTT	131034975	False	NA	9	True	AATAAA	-15	NA	131034991	131047253	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr2_+_131035289_131038852_131039033_131040015_131040193_131040260_131040441_131041229_131041463_131041814_131041945_131043451_131043584_131044298_131044543_131045368_131045447_131046037
transcript_11946.known	chr1	+	2688	10	FSM	ENSG00000064703.13	ENST00000680983.1	2688	10	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_5	12.1928941054479	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAATAGATTTGATTAGTAA	111756112	False	NA	-1	True	AATAAA	-2	NA	111756193	111767243	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_111756226_111756645_111756741_111759399_111759569_111760473_111760589_111760705_111761126_111761225_111761285_111762254_111762338_111762676_111762783_111762905_111763008_111765736
transcript_119461.known	chr2	-	1273	2	FSM	ENSG00000233221.7	ENST00000446213.2	1273	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAATTCGCTCTTCTCTGA	NA	False	NA	NA	False	ATTAAA	-22	NA	130836994	130835437	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_130836026_130836309
transcript_119463.nnic	chr2	-	5746	8	NNC	ENSG00000152102.18	novel	5435	7	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_6	164.708772054911	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGGTTTTCATGATTT	-131093484	False	NA	-13	True	AATAAA	-18	NA	131093497	131047875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_131052453_131052890_131053016_131055271_131055450_131055552_131055696_131071854_131071939_131072021_131072296_131082576_131082658_131093213
transcript_119464.nnic	chr2	-	5599	8	NNC	ENSG00000152102.18	novel	5435	7	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_7	157.184539926281	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGGTTTTCATGATTT	-131085493	True	NA	-13	True	AATAAA	-18	NA	131093469	131047875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_131052453_131052890_131053016_131055271_131055450_131055552_131055696_131071854_131071939_131082576_131082658_131091808_131091964_131093213
transcript_119466.known	chr2	-	5435	7	FSM	ENSG00000152102.18	ENST00000389915.4	5435	7	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_6	44.3946943776944	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGGTTTTCATGATTT	-131085484	True	NA	-13	True	AATAAA	-18	NA	131093460	131047875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_131052453_131052890_131053016_131055271_131055450_131055552_131055696_131071854_131071939_131082576_131082658_131093213
transcript_119468.known	chr2	-	5285	7	FSM	ENSG00000152102.18	ENST00000409185.5	5285	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	133.896311458614	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGGTTTTCATGATTT	-131085452	True	NA	-13	True	AATAAA	-18	NA	131093428	131047875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_131052453_131052890_131053016_131055271_131055450_131055552_131055696_131071854_131071939_131082576_131082658_131093331
transcript_119472.known	chr2	+	4349	9	FSM	ENSG00000115762.17	ENST00000403716.5	4349	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_7	252.45763877332	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGACTTCTGTTGTCTT	NA	False	NA	24	True	ATTAAA	-24	NA	131104846	131149851	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_131105399_131120933_131120979_131125752_131125906_131126683_131126787_131130720_131130761_131132901_131132992_131140166_131140276_131144407_131144450_131146636
transcript_119476.known	chr2	+	4208	8	FSM	ENSG00000115762.17	ENST00000234115.10	4208	8	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_6	188.915595017501	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGACTTCTGTTGTCTTT	NA	False	NA	25	True	ATTAAA	-25	NA	131104943	131149852	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_131105399_131120933_131120979_131125752_131125906_131126683_131126787_131130720_131130761_131132901_131132992_131140169_131140276_131146636
transcript_119478.known	chr2	+	2277	8	FSM	ENSG00000115762.17	ENST00000409158.5	2277	8	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_6	199.38220910132	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATCCT	NA	False	NA	NA	False	NA	NA	NA	131104846	131147797	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_131105399_131120933_131120979_131125752_131125906_131126683_131126787_131130720_131130761_131132901_131133016_131140166_131140276_131146636
transcript_119485.known	chr2	+	4177	6	FSM	ENSG00000115762.17	ENST00000439822.6	4177	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	258.360523300291	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGACTTCTGTTGTCTT	NA	False	NA	24	True	ATTAAA	-24	NA	131104846	131149851	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_131105399_131120933_131120979_131125752_131125906_131126683_131126787_131140166_131140276_131146636
transcript_119486.known	chr2	-	3677	1	FSM	ENSG00000233087.8	ENST00000623617.3	3677	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAATGTTTGAGATAAATT	NA	False	NA	NA	False	ATTAAA	-17	NA	131364168	131360491	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_131360500_131364200
transcript_119487.known	chr2	+	1520	5	FSM	ENSG00000075886.11	ENST00000321253.7	1520	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.08972473588517	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCTGTGTGTCGTGCAG	131476104	True	NA	NA	False	ATTAAA	-19	NA	131476118	131482934	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_131476203_131478163_131478387_131479307_131479457_131480068_131480750_131482551
transcript_1195.nic	chr1	-	560	5	ISM	ENSG00000248333.9	ENST00000341028.8	881	9	-123	10704	-83	-10704	5prime_fragment	FALSE	canonical	3	27	junction_3	38.9390549448751	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAACGTAGGCATCGTAG	-1659077	False	NA	-15	True	AAAAAG	-30	NA	1659095	1652475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_1652567_1655368_1655485_1657255_1657303_1657374_1657499_1658913
transcript_119500.known	chr2	-	599	3	FSM	ENSG00000173272.16	ENST00000309451.7	599	3	0	0	0	0	multi-exon	FALSE	canonical	3	1579	junction_1	28	427	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTCTCTACTGTTTTTT	-131483480	True	NA	-18	True	AATAAA	-30	NA	131492397	131483959	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_131484219_131491875_131492025_131492206
transcript_119504.nnic	chr2	+	3763	19	NNC	ENSG00000152117.18	novel	3785	18	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_8	43.4325431268897	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTCTGGCACCTGGGCTC	131491129	True	NA	34	True	AATAAA	-18	NA	131493072	131521573	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_131493141_131497209_131497294_131498866_131498954_131500203_131500347_131500505_131500582_131500961_131501071_131501180_131501234_131501357_131501509_131502454_131502693_131506311_131506443_131508536_131508609_131515601_131515748_131516313_131516405_131516856_131516958_131517726_131517891_131518502_131518709_131519049_131519284_131519534_131519667_131520096
transcript_119506.known	chr2	+	2762	19	FSM	ENSG00000152117.18	ENST00000415574.6	2762	19	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_18	43.7432181692485	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAAGGTGGCAGCTGCCT	131492800	False	NA	NA	False	NA	NA	NA	131492812	131520421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_131493141_131497209_131497294_131498866_131498954_131500203_131500347_131500505_131500582_131500961_131501071_131501180_131501234_131501357_131501509_131506311_131506443_131508536_131508609_131515601_131515748_131516313_131516405_131516856_131516958_131517726_131517891_131518502_131518709_131519049_131519284_131519534_131519667_131519813_131519943_131520096
transcript_119509.nic	chr2	+	4335	18	ISM	ENSG00000152117.18	ENST00000415574.6	2762	19	-267	-1152	-267	0	intron_retention	TRUE	canonical	3	27	junction_17	39.3671389142973	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTCTGGCACCTGGGCTC	131492533	True	NA	34	True	AATAAA	-18	NA	131492545	131521573	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_131493141_131497209_131497294_131498866_131498954_131500203_131500347_131500505_131500582_131500961_131501071_131501180_131501234_131501357_131501509_131506311_131506443_131508536_131508609_131515601_131515748_131516313_131516405_131516856_131516958_131517726_131517891_131518502_131518709_131519049_131519284_131519534_131519667_131519813
transcript_11951.known	chr1	+	2393	3	FSM	ENSG00000227811.3	ENST00000658759.1	2393	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCACAATGTGTATCCATA	111739531	True	NA	NA	False	AATAGA	-26	NA	111739578	111747798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_111740078_111744374_111744530_111746059
transcript_119510.known	chr2	+	3785	18	FSM	ENSG00000152117.18	ENST00000438378.2	3785	18	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_8	35.3522070981828	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTCTGGCACCTGGGCTC	131492800	False	NA	34	True	AATAAA	-18	NA	131492812	131521573	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_131493141_131497209_131497294_131498866_131498954_131500203_131500347_131500505_131500582_131500961_131501071_131501180_131501234_131501357_131501509_131506311_131506443_131508536_131508609_131515601_131515748_131516313_131516405_131516856_131516958_131517726_131517891_131518502_131518709_131519049_131519284_131519534_131519667_131520096
transcript_119519.nnic	chr2	+	3376	17	NIC	ENSG00000152117.18	novel	3785	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_10	40.8072833572636	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTCTGGCACCTGGGCTC	131491132	True	NA	34	True	AATAAA	-18	NA	131493075	131521573	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_131493141_131497209_131497294_131498866_131498954_131500203_131500347_131500505_131500582_131500961_131501071_131501180_131501234_131501357_131501509_131506311_131506443_131508536_131508609_131516313_131516405_131516856_131516958_131517726_131517891_131518502_131518709_131519049_131519284_131519534_131519667_131520096
transcript_11953.known	chr1	+	2240	3	FSM	ENSG00000227811.3	ENST00000430373.2	2240	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATAGAACAAGGACATCC	111739672	False	NA	NA	False	AATAAA	-20	NA	111739719	111747765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_111740099_111744374_111744530_111746059
transcript_11954.known	chr1	-	5951	2	FSM	ENSG00000197852.12	ENST00000357260.6	5951	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCAGATTCCCTCTGAA	-111738185	True	NA	-8	True	AATAAA	-18	NA	111739395	111722063	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_111727805_111739185
transcript_119548.known	chr2	+	1543	8	FSM	ENSG00000163040.15	ENST00000295171.10	1543	8	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	31.7573709907621	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	NA	False	NA	NA	False	AATAAA	-17	NA	131527832	131533666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_131528221_131529646_131529692_131530578_131530828_131531663_131531803_131532588_131532782_131532863_131532938_131533012_131533070_131533268
transcript_119552.known	chr2	+	1290	8	FSM	ENSG00000163040.15	ENST00000409856.8	1290	8	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	28.4648010349481	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	131527868	False	NA	NA	False	AATAAA	-17	NA	131527887	131533666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_131528221_131529646_131529692_131530776_131530828_131531663_131531803_131532588_131532782_131532863_131532938_131533012_131533070_131533268
transcript_119558.nic	chr2	+	1614	8	NIC	ENSG00000163040.15	novel	1543	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	44.105161898835	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	131527868	False	NA	NA	False	AATAAA	-17	NA	131527887	131533666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_131528347_131529646_131529692_131530578_131530828_131531663_131531803_131532588_131532782_131532863_131532938_131533012_131533070_131533268
transcript_11956.known	chr1	+	3153	10	FSM	ENSG00000064703.13	ENST00000679576.1	3153	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	68.5792323601767	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAATAGATTTGATTAGTA	111751678	True	NA	-2	True	AATAAA	-1	NA	111755924	111767242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_111756226_111756645_111756741_111759399_111759569_111760477_111760589_111760705_111760849_111760986_111761126_111761225_111761285_111762254_111762783_111762905_111763008_111765736
transcript_119560.nic	chr2	+	1416	8	NIC	ENSG00000163040.15	novel	1290	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	42.3064620914332	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	131527868	False	NA	NA	False	AATAAA	-17	NA	131527887	131533666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_131528347_131529646_131529692_131530776_131530828_131531663_131531803_131532588_131532782_131532863_131532938_131533012_131533070_131533268
transcript_119567.nic	chr2	+	2386	7	NIC	ENSG00000163040.15	novel	1543	8	NA	NA	-11	0	intron_retention	FALSE	canonical	3	85	junction_2	24.0028933441135	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	131527857	False	NA	NA	False	AATAAA	-17	NA	131527876	131533666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_131528221_131529646_131530828_131531663_131531803_131532588_131532782_131532863_131532938_131533012_131533070_131533268
transcript_11957.known	chr1	+	5864	6	FSM	ENSG00000143079.15	ENST00000271277.11	5864	6	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	18.1482781552411	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGTAGTGGTTCTCAAA	112390375	True	NA	9	True	AATAAA	-16	NA	112396213	112461164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_112396273_112412193_112412318_112416156_112416265_112448941_112449173_112454448_112454557_112455930
transcript_119581.nic	chr2	+	3118	6	NIC	ENSG00000163040.15	novel	1543	8	NA	NA	-3	0	intron_retention	FALSE	canonical	3	85	junction_2	24.4327648865207	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	131527911	False	NA	NA	False	AATAAA	-17	NA	131527930	131533666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_131528221_131529646_131530828_131531663_131532782_131532863_131532938_131533012_131533070_131533268
transcript_119589.nic	chr2	+	4104	5	NIC	ENSG00000163040.15	novel	1543	8	NA	NA	-52	0	intron_retention	FALSE	canonical	3	92	junction_1	20.7409618870485	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	NA	False	NA	NA	False	AATAAA	-17	NA	131527780	131533666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_131528221_131529646_131532782_131532863_131532938_131533012_131533070_131533268
transcript_119595.known	chr2	+	2005	10	FSM	ENSG00000287151.1	ENST00000657415.1	2005	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	16.5335424120591	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTTCTTTCACTCCCT	131681529	True	NA	NA	False	AATAAA	-21	NA	131682474	131767404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_131682558_131684708_131684820_131686063_131686212_131686329_131686442_131688165_131688304_131722416_131722649_131733832_131733953_131750632_131750831_131751508_131751586_131766618
transcript_119602.known	chr2	+	2119	6	FSM	ENSG00000287151.1	ENST00000666411.1	2119	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	15.0811140172071	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGTTTCACAAAGAAAAAAA	131681535	True	NA	NA	False	AATGAA	-4	NA	131682480	131698401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_131682558_131684708_131684820_131686063_131686212_131686329_131686442_131688165_131688304_131696868
transcript_119609.known	chr2	-	1682	1	FSM	ENSG00000272769.1	ENST00000608279.1	1682	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACCATTCTTCACGCCGC	-132347263	True	NA	NA	False	AATAAA	-19	NA	132347297	132345615	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_132345600_132347300
transcript_119611.known	chr2	+	2576	2	FSM	ENSG00000183840.7	ENST00000329321.4	2576	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGTGTACAAGACACAGC	132416765	True	NA	NA	False	AATAAA	-43	NA	132416804	132646582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_132417899_132645100
transcript_119613.known	chr2	-	3458	3	FSM	ENSG00000150551.11	ENST00000397463.3	3458	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	1	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTCCTTTGAGTTTGCT	-132669829	True	NA	NA	False	AATATA	-15	NA	132670205	132643285	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_132646281_132668399_132668538_132669880
transcript_119616.known	chr2	-	1892	8	FSM	ENSG00000152128.13	ENST00000281924.6	1892	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	3.20076521462973	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAAGGCAATCTTTGGCA	-134718925	False	NA	0	True	AATAAA	-25	NA	134719000	134455758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_134456777_134458031_134458174_134466113_134466226_134502900_134502998_134550569_134550662_134552047_134552092_134713199_134713320_134718733
transcript_119621.known	chr2	-	3510	4	FSM	ENSG00000224043.8	ENST00000428857.2	3510	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	5.71547606649408	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCAAAGCATAGCCATAT	-134918353	True	NA	NA	False	AATATA	-37	NA	134918710	134864599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_134867740_134868943_134869042_134877519_134877644_134918562
transcript_119622.known	chr2	-	636	3	FSM	ENSG00000224043.8	ENST00000413962.5	636	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAAAACAAGCGTCAGGAA	-134918321	True	NA	NA	False	AATATA	-7	NA	134918678	134867317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_134867740_134868943_134869042_134918562
transcript_119627.known	chr2	+	4491	10	FSM	ENSG00000082258.13	ENST00000295238.10	4491	10	0	0	0	0	multi-exon	TRUE	canonical	3	181	junction_9	73.3151492606481	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGATTGTGTGAGCTATTC	134913346	True	NA	8	True	ATTAAA	-23	NA	134918824	134957017	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_134919013_134919809_134919892_134936840_134936970_134939001_134939063_134942611_134942675_134946100_134946147_134947735_134947900_134952640_134952712_134953229_134954380_134954480
transcript_119629.known	chr2	+	4185	25	FSM	ENSG00000115839.19	ENST00000442034.5	4185	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	42.7351135549627	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATATCTATATATAATAT	135048669	True	NA	NA	False	AATAGA	-41	NA	135052297	135169989	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_135052326_135052429_135052486_135058010_135058087_135090997_135091131_135093614_135093694_135113150_135113271_135115215_135115382_135120818_135120919_135124164_135124247_135126180_135126250_135126582_135126657_135129994_135130088_135130551_135130722_135132894_135132985_135133860_135134034_135135264_135135320_135135563_135135933_135150368_135150507_135153648_135153877_135162554_135162652_135162747_135162852_135162985_135163102_135164593_135164697_135167692_135167714_135168544
transcript_119630.known	chr2	+	4891	24	FSM	ENSG00000115839.19	ENST00000264158.13	4891	24	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	18.5260252236148	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGTAGGAGTTTCTTCA	135048663	True	NA	NA	False	AATAAA	-18	NA	135052291	135170710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_135052326_135052429_135052486_135058010_135058087_135090997_135091131_135093614_135093694_135113150_135113271_135115215_135115382_135120818_135120919_135124164_135124247_135126180_135126250_135126582_135126657_135129994_135130088_135130551_135130722_135132894_135132985_135133860_135134034_135135264_135135320_135135563_135135933_135150368_135150507_135153648_135153877_135162554_135162652_135162747_135162852_135162985_135163102_135164593_135164697_135168544
transcript_119636.known	chr2	-	6712	21	FSM	ENSG00000121988.18	ENST00000264159.11	6712	21	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_9	16.6669583307813	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTCTCTGCCCTAGCA	-135530126	True	NA	0	True	ATTAAA	-22	NA	135531218	135196968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_135200441_135202831_135202964_135207433_135207837_135208867_135208979_135217464_135217608_135219076_135219179_135224425_135224518_135227811_135228016_135230512_135230928_135265533_135265687_135268961_135269142_135271767_135271888_135275635_135275756_135313488_135313606_135315358_135315531_135345549_135345636_135349983_135350216_135353449_135353629_135390801_135390821_135504328_135504497_135531126
transcript_119639.known	chr2	-	6820	21	FSM	ENSG00000121988.18	ENST00000401392.5	6820	21	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	18.1886640520957	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTCTCTGCCCTAGCA	-135530716	False	1092	0	True	ATTAAA	-22	NA	135530731	135196968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_135200441_135202831_135202964_135207433_135207837_135208867_135208979_135217464_135217608_135219076_135219179_135224425_135224518_135227817_135228016_135230512_135230928_135265533_135265687_135268961_135269142_135271767_135271888_135275635_135275756_135313488_135313606_135315358_135315531_135345549_135345636_135349983_135350216_135353449_135353629_135390801_135390821_135504328_135504497_135530525
transcript_119669.known	chr2	+	4272	23	FSM	ENSG00000048991.17	ENST00000409478.5	4272	23	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_13	45.2105496720942	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGCTCACTTTGTCTTTT	135525707	True	NA	NA	False	AATAAA	-12	NA	135531500	135725266	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_135531634_135602499_135602709_135604805_135605017_135621493_135621609_135622653_135622733_135631717_135631778_135631860_135632002_135635889_135635999_135636087_135636184_135638617_135638656_135638738_135638790_135638895_135639123_135645378_135645528_135651729_135652033_135661269_135661394_135675331_135675487_135680172_135680325_135709432_135709537_135710058_135710232_135715549_135715695_135721923_135722007_135722468_135722554_135723936
transcript_119672.nic	chr2	+	4326	23	NIC	ENSG00000048991.17	novel	4648	26	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	118	junction_13	43.1050274147895	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGCTCACTTTGTCTTT	135525649	True	NA	NA	False	AATAAA	-11	NA	135531442	135725265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_135531634_135602499_135602709_135604805_135605017_135621493_135621609_135622653_135622733_135631717_135631778_135631860_135632002_135635889_135635999_135636087_135636184_135638617_135638656_135638738_135638790_135638895_135639123_135645378_135645528_135651732_135652033_135661269_135661394_135675331_135675487_135680172_135680325_135709432_135709537_135710058_135710232_135715549_135715695_135721923_135722007_135722468_135722554_135723936
transcript_119677.nic	chr2	+	1115	8	ISM	ENSG00000048991.17	ENST00000409478.5	4272	23	-58	89268	-12	-185	5prime_fragment	FALSE	canonical	3	165	junction_3	44.988887516808	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATCTAGAACAATTGTAG	135525649	True	NA	NA	False	NA	NA	NA	135531442	135635998	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_135531634_135602499_135602709_135604805_135605017_135621493_135621609_135622653_135622733_135631717_135631778_135631860_135632002_135635889
transcript_119685.nic	chr2	+	688	4	ISM	ENSG00000048991.17	ENST00000409478.5	4272	23	-58	103696	-12	-10173	5prime_fragment	FALSE	canonical	3	165	junction_3	56.0416511771974	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAGTGATAAGTTGCCCA	135525649	True	NA	NA	False	AAAAAG	-5	NA	135531442	135621570	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_135531634_135602499_135602709_135604805_135605017_135621493
transcript_119686.known	chr2	+	2241	3	FSM	ENSG00000048991.17	ENST00000463230.5	2241	3	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_1	30.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCGGGAGGCAGAGGTTAC	135525679	True	NA	NA	False	NA	NA	NA	135531472	135606676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_135531634_135602499_135602709_135604805
transcript_119688.known	chr2	+	3771	13	FSM	ENSG00000144224.17	ENST00000272638.14	3771	13	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_3	61.9899185351941	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTACCTTGCATCTTGC	135735520	True	NA	NA	False	AATAAA	-16	NA	135741854	135785056	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_135742012_135748266_135748370_135753538_135753568_135754158_135754278_135755516_135755692_135761817_135761912_135769768_135769824_135770570_135770736_135772419_135772548_135776248_135776352_135778947_135779080_135780182_135780386_135782748
transcript_119696.nic	chr2	+	1018	8	ISM	ENSG00000144224.17	ENST00000272638.14	3771	13	-267	14467	-146	8678	5prime_fragment	FALSE	canonical	3	421	junction_3	60.2813133126169	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAGAGGAGAAAAACTGGA	NA	False	NA	17	True	CATAAA	-38	NA	135741587	135770589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_135742012_135748266_135748370_135753538_135753568_135754158_135754278_135755516_135755692_135761817_135761912_135769768_135769824_135770570
transcript_119697.nic	chr2	+	1087	8	ISM	ENSG00000144224.17	ENST00000272638.14	3771	13	-267	14398	-146	8747	5prime_fragment	FALSE	canonical	3	421	junction_3	60.2813133126169	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGCTGGAGGAAAGAAAC	NA	False	NA	86	True	TATAAA	-29	NA	135741587	135770658	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_135742012_135748266_135748370_135753538_135753568_135754158_135754278_135755516_135755692_135761817_135761912_135769768_135769824_135770570
transcript_119698.nic	chr2	+	999	7	ISM	ENSG00000144224.17	ENST00000272638.14	3771	13	-267	15233	-146	7912	5prime_fragment	FALSE	canonical	3	421	junction_3	61.0810026840497	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGTTCATGCAGTTAGC	NA	False	NA	13	True	AAGAAA	-33	NA	135741587	135769823	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_135742012_135748266_135748370_135753538_135753568_135754158_135754278_135755516_135755692_135761817_135761912_135769768
transcript_119702.nic	chr2	+	944	6	ISM	ENSG00000144224.17	ENST00000272638.14	3771	13	-267	23145	-146	0	5prime_fragment	FALSE	canonical	3	421	junction_3	66.9059040743042	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCTCTTCTTTTTGCAA	NA	False	NA	16	True	NA	NA	NA	135741587	135761911	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_135742012_135748266_135748370_135753538_135753568_135754158_135754278_135755516_135755692_135761817
transcript_119710.known	chr2	+	1255	5	FSM	ENSG00000144224.17	ENST00000416538.5	1255	5	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_3	63.4049485450465	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCTCTTCTTTTTGCAA	135735533	True	NA	16	True	NA	NA	NA	135741867	135761911	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_135742012_135748266_135748370_135753538_135754278_135755516_135755692_135761817
transcript_119715.known	chr2	+	568	4	FSM	ENSG00000144224.17	ENST00000426921.5	568	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	240.366849258009	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGAGGACCTCAACATCC	135735451	True	NA	-14	True	NA	NA	NA	135741785	135761881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_135742012_135748266_135748370_135755516_135755692_135761817
transcript_119721.known	chr2	-	3753	17	FSM	ENSG00000076003.5	ENST00000264156.3	3753	17	0	0	0	0	multi-exon	FALSE	canonical	3	732	junction_13	99.8924226042696	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTGAATACTCAAGTAGAT	-135861754	True	NA	-14	True	AATAAA	-20	NA	135876443	135839625	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_135840952_135844544_135844685_135846236_135846393_135848052_135848189_135851401_135851564_135852786_135852916_135856727_135856884_135857896_135858005_135859300_135859443_135862606_135862749_135865012_135865164_135866131_135866278_135866562_135866729_135868610_135868861_135870250_135870362_135872696_135872844_135876258
transcript_119731.nic	chr2	-	2419	16	ISM	ENSG00000076003.5	ENST00000264156.3	3753	17	-55	4982	-55	0	5prime_fragment	FALSE	canonical	3	732	junction_12	77.9212137710621	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAACTTATAAATAA	NA	False	NA	NA	False	NA	NA	NA	135876498	135844607	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_135844685_135846236_135846393_135848052_135848189_135851401_135851564_135852786_135852916_135856727_135856884_135857896_135858005_135859300_135859443_135862606_135862749_135865012_135865164_135866131_135866278_135866562_135866729_135868610_135868861_135870250_135870362_135872696_135872844_135876258
transcript_119740.known	chr2	-	3099	16	FSM	ENSG00000115866.11	ENST00000264161.9	3099	16	0	0	0	0	multi-exon	FALSE	canonical	3	874	junction_8	78.5526292084202	215	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGATGTAATCTTTTTTA	-135977983	True	NA	-1	True	AATAAA	-16	NA	135985626	135905880	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_135907408_135911138_135911211_135911381_135911494_135912485_135912567_135914468_135914512_135916225_135916373_135920452_135920601_135922783_135922919_135924386_135924499_135932782_135932843_135933909_135933991_135943377_135943481_135961395_135961499_135979273_135979367_135983396_135983455_135985402
transcript_119756.known	chr2	-	1668	2	FSM	ENSG00000121966.7	ENST00000241393.4	1668	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTGTTATGTTCTGATT	-136118028	True	NA	0	True	AATAAA	-18	NA	136118149	136114348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_136115913_136118045
transcript_119758.known	chr2	+	3132	6	FSM	ENSG00000150540.14	ENST00000280097.5	3132	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	3.26190128606002	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGGACTCTTTCAGACAC	137964258	True	NA	NA	False	AATAAA	-32	NA	137964472	138016364	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_137964629_137970164_137970218_138000917_138001026_138002063_138002195_138005131_138005226_138013774
transcript_119759.known	chr2	+	504	2	FSM	ENSG00000150540.14	ENST00000280096.5	504	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTGGCATGTGGAATAAC	137964258	True	NA	NA	False	AATAAA	-24	NA	137964472	137967444	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_137964629_137967096
transcript_119764.known	chr2	+	6056	11	FSM	ENSG00000144228.9	ENST00000280098.9	6056	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	2.89136645896019	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATCATTTGATGCTATC	138501699	True	NA	NA	False	NA	NA	NA	138501769	138573547	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_138502120_138550156_138550295_138550482_138550605_138550902_138551055_138552553_138552682_138559021_138559200_138559281_138559338_138560804_138560928_138564707_138564851_138564939_138564994_138568935
transcript_119769.known	chr2	-	2709	2	FSM	ENSG00000144227.5	ENST00000272641.4	2709	2	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGGTGGTTATTTTTTA	-138780114	True	NA	NA	False	AATAAA	-28	NA	138780390	138669156	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_138671666_138780190
transcript_11977.known	chr1	+	2358	10	FSM	ENSG00000116489.13	ENST00000263168.4	2358	10	0	0	0	0	multi-exon	FALSE	canonical	3	958	junction_9	62.5503254178309	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTGAGTCTCTCCTTTT	112618660	True	NA	10	True	AATATA	-18	NA	112619831	112671616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_112619884_112647209_112647274_112649417_112649470_112653597_112653662_112654464_112654672_112659021_112659102_112659700_112659780_112667073_112667146_112669542_112669606_112669991
transcript_119771.known	chr2	-	677	1	FSM	ENSG00000284167.1	ENST00000639587.1	677	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATGACCCACCAAACACAA	NA	False	NA	NA	False	AATACA	-1	NA	143100612	143099935	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_143099900_143100600
transcript_119780.known	chr2	-	10585	12	FSM	ENSG00000121964.15	ENST00000682281.1	10585	12	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_4	23.9841545488159	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTATGTGTGTGTGT	-144330981	True	NA	NA	False	AATAAA	-29	NA	144332512	143938067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_143947136_143951981_143952074_143952772_143952844_143957194_143957340_143970652_143970763_144007181_144007536_144141881_144142056_144145571_144145740_144208602_144208805_144211514_144211580_144235675_144235738_144332438
transcript_119784.nic	chr2	-	2571	11	NIC	ENSG00000121964.15	novel	10585	12	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	29.8033555157804	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGCATATTCATTTACATA	-144331058	True	NA	-5	True	AATAAA	-32	NA	144332589	143946013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_143947136_143951981_143952074_143952772_143952844_143970652_143970763_144007181_144007536_144141881_144142056_144145571_144145740_144208602_144208805_144211514_144211580_144235675_144235738_144332438
transcript_119787.known	chr2	-	1563	10	FSM	ENSG00000121964.15	ENST00000463875.6	1563	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	29.0516780926679	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTATGATGGTTACACATG	-144330985	True	NA	NA	False	ATTAAA	-17	NA	144332516	143946826	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_143947136_143951981_143952074_143952772_143952844_143957194_143957340_143970652_143970763_144007181_144007536_144141881_144142056_144145571_144145740_144235675_144235738_144332438
transcript_119789.nic	chr2	-	2461	10	NIC	ENSG00000121964.15	novel	2408	10	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	31.1590899881381	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGCATATTCATTTACATA	-144331058	True	NA	-5	True	AATAAA	-32	NA	144332589	143946013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_143947136_143951981_143952074_143952772_143952844_144007181_144007536_144141881_144142056_144145571_144145740_144208602_144208805_144211514_144211580_144235675_144235738_144332438
transcript_119799.known	chr2	-	586	5	FSM	ENSG00000121964.15	ENST00000429978.5	586	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	45.6145535986049	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTTTTTCTTCCGGCA	-144331037	True	NA	NA	False	NA	NA	NA	144332568	144178833	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_144178961_144208602_144208805_144211514_144211580_144235675_144235738_144332438
transcript_119803.known	chr2	-	2677	12	FSM	ENSG00000121964.15	ENST00000542155.5	2677	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	32.7479732512734	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAGCATATTCATTTACA	-144331003	True	NA	-7	True	AATAAA	-30	NA	144332534	143946015	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_143947136_143951981_143952074_143952772_143952844_143957194_143957340_143970652_143970763_144007181_144007536_144141881_144142056_144145571_144145740_144208602_144208805_144211514_144211598_144235675_144235738_144332438
transcript_119804.known	chr2	+	4131	2	FSM	ENSG00000204406.14	ENST00000478190.3	4131	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTCCACATTCAATAAAAG	148021225	False	NA	NA	False	NA	NA	NA	148021237	148028649	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_148021685_148024965
transcript_119805.known	chr2	+	324	2	FSM	ENSG00000204406.14	ENST00000470063.5	324	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAGTAACTATAGCCC	148021433	False	NA	NA	False	ACTAAA	-2	NA	148021454	148178793	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_148021685_148178699
transcript_119807.known	chr2	+	252	2	FSM	ENSG00000204406.14	ENST00000469438.1	252	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGCACCCCACCCTGGC	148021571	False	NA	NA	False	NA	NA	NA	148021592	148041365	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_148021685_148041205
transcript_119812.known	chr2	-	6710	15	FSM	ENSG00000115947.14	ENST00000535373.5	6710	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_14	153.876043407328	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTGATGAAGCTTCTTT	-148011719	True	NA	-1	True	TATAAA	-17	NA	148020747	147930396	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_147935699_147938145_147938214_147938297_147938394_147939139_147939249_147943435_147943523_147948050_147948225_147952372_147952525_147955346_147955396_147958297_147958384_147958790_147958867_147972738_147972830_147973447_147973525_147975901_147975976_147981927_147982082_148020632
transcript_119816.known	chr2	-	6547	14	FSM	ENSG00000115947.14	ENST00000392857.10	6547	14	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_7	43.1820146650494	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGATGAAGCTTCTTTC	-148011709	True	NA	0	True	TATAAA	-18	NA	148020737	147930395	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_147935699_147938145_147938214_147938297_147938394_147939139_147939249_147943435_147943523_147948050_147948225_147952372_147952525_147955346_147955396_147958297_147958384_147958790_147958867_147972738_147972830_147973447_147973525_147975901_147975976_148020632
transcript_119822.known	chr2	-	6598	14	FSM	ENSG00000115947.14	ENST00000264169.6	6598	14	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_13	121.713505884897	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTGATGAAGCTTCTTT	-148021558	True	NA	-1	True	TATAAA	-17	NA	148021604	147930396	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_147935699_147938145_147938214_147938297_147938394_147939139_147939249_147943435_147943523_147948050_147948225_147952372_147952525_147955346_147955396_147958297_147958384_147958790_147958867_147972738_147972830_147973447_147973525_147975901_147975976_148021447
transcript_119824.nic	chr2	-	1729	14	NIC	ENSG00000115947.14	novel	6598	14	NA	NA	0	1050	combination_of_known_junctions	FALSE	canonical	3	86	junction_13	105.331598118182	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGACCATGTGCTTTTTTA	-148011733	True	NA	-4	True	AATAAA	-19	NA	148020761	147935262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_147935699_147938145_147938214_147938297_147938394_147939139_147939249_147943435_147943523_147948050_147948225_147952372_147952525_147955346_147955396_147958297_147958384_147958790_147958867_147972738_147972830_147973447_147973525_147975901_147975976_148020607
transcript_119836.known	chr2	+	5214	11	FSM	ENSG00000121989.15	ENST00000241416.12	5214	11	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_2	15.9527427108946	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATTTGCATATGCAGTT	147844866	False	NA	11	True	AATAAA	-14	NA	147845028	147930822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_147845208_147896300_147896509_147899457_147899568_147899743_147899899_147915190_147915335_147917282_147917427_147918446_147918593_147920229_147920345_147922972_147923112_147926030_147926162_147927079
transcript_119840.known	chr2	+	3883	14	FSM	ENSG00000135999.12	ENST00000258484.11	3883	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	8.10872858652581	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGCTGCATATGTGTTT	148642330	True	NA	10	True	AATAAA	-20	NA	148644750	148787569	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_148645171_148690213_148690374_148743621_148743768_148753926_148754134_148761781_148761931_148762669_148762803_148764954_148765147_148769150_148769241_148770791_148770938_148771043_148771388_148781643_148781781_148783596_148783757_148784667_148785002_148786304
transcript_119844.known	chr2	+	6951	26	FSM	ENSG00000168280.18	ENST00000677280.1	6951	26	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_18	41.2051647248255	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTCTGTTTCTCCTTAT	148869333	True	NA	NA	False	AATAAA	-17	NA	148875226	149026759	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_148875744_148922136_148922228_148929280_148929355_148937283_148937389_148941609_148941659_148941934_148941991_148942672_148942761_148946898_148947024_148949838_148949944_148950313_148950463_148961970_148962120_148973335_148973512_148978921_148978991_148981354_148981562_148983619_148983767_148991009_148991199_148994420_148994539_148997263_148997341_148998402_148998510_149000422_149000525_149000721_149000783_149005392_149005465_149007962_149008068_149010134_149010352_149011569_149011684_149023077
transcript_119847.nic	chr2	+	3298	25	ISM	ENSG00000168280.18	ENST00000435030.6	6954	26	-32	15082	-32	2695	5prime_fragment	FALSE	canonical	3	143	junction_8	20.2967139513327	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAAGTGAGTCCCATGTC	148869301	True	NA	-2	True	AATAAA	-1	NA	148875194	149011677	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_148875744_148922136_148922228_148929280_148929355_148937283_148937389_148941609_148941659_148941934_148941991_148942672_148942761_148946898_148947024_148949838_148949944_148950313_148950463_148961970_148962120_148973335_148973512_148978921_148978991_148981354_148981562_148983619_148983767_148991009_148991199_148994420_148994539_148997263_148997341_148998399_148998510_149000422_149000525_149000721_149000783_149005392_149005465_149007962_149008068_149010134_149010352_149011569
transcript_119849.known	chr2	+	2957	19	FSM	ENSG00000168280.18	ENST00000678291.1	2957	19	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_8	20.0776271285008	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAATTTGGTCC	148869333	True	NA	NA	False	AAAAAG	-16	NA	148875226	148998865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_148875744_148922136_148922228_148929280_148929355_148937283_148937389_148941609_148941659_148941934_148941991_148942672_148942761_148946898_148947024_148949838_148949944_148950313_148950463_148961970_148962120_148973335_148973512_148978921_148978991_148981354_148981562_148983619_148983767_148991009_148991199_148994420_148994539_148997263_148997341_148998399
transcript_119852.nic	chr2	+	1500	11	ISM	ENSG00000168280.18	ENST00000676875.1	3315	14	-32	20837	-32	0	5prime_fragment	FALSE	canonical	3	143	junction_8	18.3109257002479	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAGCATCTGGAGATGGA	148869301	True	NA	63	True	AAAAAG	-33	NA	148875194	148962079	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_148875744_148922136_148922228_148929280_148929355_148937283_148937389_148941609_148941659_148941934_148941991_148942672_148942761_148946898_148947024_148949838_148949944_148950313_148950463_148961970
transcript_119854.known	chr2	+	3377	3	FSM	ENSG00000168280.18	ENST00000679018.1	3377	3	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_1	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATTTTCAGAGGAAGACA	148869333	True	NA	NA	False	NA	NA	NA	148875226	148932049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_148875744_148922136_148922228_148929280
transcript_119859.known	chr2	+	1345	7	FSM	ENSG00000150556.17	ENST00000409642.8	1345	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	5.87130498460285	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATGCTTGTGTGTTTCTT	149038456	True	NA	NA	False	AATAAA	-24	NA	149038698	149215262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_149038802_149130882_149130954_149160763_149160836_149205252_149205405_149208313_149208413_149212991_149213123_149214545
transcript_119863.known	chr2	+	1248	6	FSM	ENSG00000150556.17	ENST00000409876.5	1248	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	4.66476151587624	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAATGCATGCTTGTGTG	149038475	True	NA	NA	False	AATAAA	-18	NA	149038717	149215256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_149038802_149130882_149130954_149205252_149205405_149208313_149208413_149212991_149213123_149214545
transcript_119865.known	chr2	+	4011	5	FSM	ENSG00000187123.15	ENST00000334166.9	4011	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	13.0096118312577	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGAAAAATGTCAGTTTG	149329666	True	NA	9	True	AGTAAA	-21	NA	149330586	149474138	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_149330723_149437637_149437827_149449048_149449148_149468644_149468776_149470682
transcript_119875.known	chr2	-	1392	8	FSM	ENSG00000168288.13	ENST00000303319.10	1392	8	0	0	0	0	multi-exon	FALSE	canonical	3	1052	junction_1	58.3822729595069	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTGTGTTTTCATTACA	-149574029	True	NA	-36	True	AATAAA	-19	NA	149587775	149569636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_149570169_149571084_149571172_149575710_149575842_149576436_149576543_149579430_149579649_149582126_149582272_149587088_149587150_149587663
transcript_119880.known	chr2	-	1726	7	FSM	ENSG00000168288.13	ENST00000428879.5	1726	7	0	0	0	0	multi-exon	FALSE	canonical	3	1052	junction_1	62.7694193059009	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACAATAATGTGTGTTTT	-149573856	False	NA	-43	True	AATAAA	-12	NA	149587602	149569643	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_149570169_149571084_149571172_149575710_149575842_149576436_149576543_149579430_149579649_149582126_149582272_149587088
transcript_119881.known	chr2	-	2684	6	FSM	ENSG00000115963.14	ENST00000263895.9	2684	6	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_5	105.300332383141	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATCTGTCTTTTATTAT	-150478462	True	NA	-3	True	AATAAA	-25	NA	150487667	150468194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_150470239_150471626_150471762_150474874_150474985_150486693_150486782_150487267_150487456_150487548
transcript_119882.nic	chr2	-	2668	6	NIC	ENSG00000115963.14	novel	2684	6	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_5	195.400102354119	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATCTGTCTTTTATTAT	-150478532	True	NA	-3	True	AATAAA	-25	NA	150487737	150468194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_150470239_150471626_150471762_150474874_150474985_150486693_150486782_150487267_150487456_150487634
transcript_119884.known	chr2	-	2777	5	FSM	ENSG00000115963.14	ENST00000375734.6	2777	5	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_1	53.2793346429927	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATCTGTCTTTTATTAT	-150478462	True	NA	-3	True	AATAAA	-25	NA	150487667	150468194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_150470239_150471626_150471762_150474874_150474985_150486693_150486782_150487267
transcript_119885.known	chr2	-	4176	4	FSM	ENSG00000184898.7	ENST00000331426.6	4176	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.24721912892465	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATATGTGTTTAAATGTG	-151261684	True	NA	NA	False	AATAAA	-17	NA	151261863	151247939	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_151251665_151252754_151252856_151255532_151255744_151261724
transcript_119887.known	chr2	-	1229	8	FSM	ENSG00000123609.11	ENST00000243346.10	1229	8	0	0	0	0	multi-exon	TRUE	canonical	3	79	junction_7	10.9376712814577	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATGTGTATTGGTGCCA	-151289069	True	NA	-5	True	AATAAA	-15	NA	151289668	151270469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_151270876_151271625_151271733_151275483_151275671_151275757_151275865_151278827_151278991_151281947_151282044_151282867_151282955_151289592
transcript_119888.known	chr2	+	1422	6	FSM	ENSG00000123610.5	ENST00000243347.5	1422	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0.632455532033676	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTGTGCACCTCTCTA	151357531	True	NA	NA	False	AATAAA	-15	NA	151357591	151380046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_151357761_151363942_151364081_151366055_151366218_151370019_151370249_151373548_151373590_151379363
transcript_119891.nic	chr2	-	1229	12	ISM	ENSG00000183091.21	ENST00000397345.8	26191	182	1	224314	1	-20455	5prime_fragment	FALSE	canonical	0	0	junction_1	0.890723542830247	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGGAAATCATCCCATTTA	-151734003	True	NA	NA	False	AATAAA	-28	NA	151734475	151709652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_151709764_151710433_151710539_151717415_151717521_151723381_151723487_151724259_151724365_151724856_151724962_151725452_151725561_151727690_151727907_151729614_151729657_151733120_151733186_151733711_151733796_151734397
transcript_119892.nic	chr2	-	1013	10	ISM	ENSG00000183091.21	ENST00000397345.8	26191	182	1	232077	1	-28218	5prime_fragment	FALSE	canonical	0	0	junction_1	0.955813918560292	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAAATAGAGCTGGGA	-151734003	True	NA	NA	False	AAGAAA	-22	NA	151734475	151717415	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_151717521_151723381_151723487_151724259_151724365_151724856_151724962_151725452_151725561_151727690_151727907_151729614_151729657_151733120_151733186_151733711_151733796_151734397
transcript_11990.known	chr1	+	867	8	FSM	ENSG00000116489.13	ENST00000476936.5	867	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	375.594549090003	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTCTGCCACATTTAAT	112618647	True	NA	NA	False	NA	NA	NA	112619818	112670383	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_112619884_112647209_112647274_112649417_112649470_112659021_112659102_112659700_112659780_112667073_112667146_112669542_112669606_112669991
transcript_119900.known	chr2	+	8053	35	FSM	ENSG00000080345.18	ENST00000453091.6	8053	35	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_16	52.1867239079935	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCAACTTCTGGCGGTTA	151409865	False	NA	NA	False	AAGAAA	-11	NA	151409882	151475622	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_151410034_151410413_151410528_151411259_151411339_151414822_151414920_151416560_151416689_151416806_151416902_151420189_151420380_151422949_151423043_151428783_151428923_151433076_151433229_151435462_151435581_151436826_151437004_151437240_151437352_151438683_151438747_151440026_151440128_151441904_151441992_151443258_151443330_151443528_151443710_151445337_151445446_151446425_151446576_151451605_151451706_151454894_151455160_151456577_151456621_151457760_151457964_151458810_151458911_151459999_151460120_151461137_151461290_151462241_151462323_151462411_151462467_151462883_151466121_151467999_151468147_151468640_151468757_151469710_151469865_151473963_151474073_151474856
transcript_11991.known	chr1	+	739	3	FSM	ENSG00000116489.13	ENST00000485542.5	739	3	0	0	0	0	multi-exon	FALSE	canonical	3	1049	junction_1	65.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAATAAAATCTAAACTTG	112618633	True	NA	NA	False	NA	NA	NA	112619804	112650013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_112619884_112647209_112647274_112649417
transcript_119910.nnic	chr2	+	3090	26	NNC	ENSG00000080345.18	novel	7722	35	NA	NA	6	4990	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	30.9364768517684	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAAACCAGCAGCCAAAG	151398705	True	NA	NA	False	AATAAA	-9	NA	151409891	151460100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_151409940_151410413_151410528_151411259_151411339_151414822_151414920_151416560_151416689_151416806_151416902_151420189_151420380_151422949_151423043_151428783_151428923_151433076_151433229_151435462_151435581_151436826_151437004_151437240_151437352_151438683_151438747_151440026_151440128_151441904_151441968_151443258_151443330_151443528_151443710_151445337_151445446_151446425_151446576_151451605_151451706_151454894_151455160_151456577_151456621_151457760_151457964_151458810_151458911_151459999
transcript_119911.nic	chr2	+	3122	26	ISM	ENSG00000080345.18	ENST00000428287.6	7722	35	-2	15288	1	4990	5prime_fragment	FALSE	canonical	0	0	junction_16	34.4505210410525	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAAACCAGCAGCCAAAG	151398697	True	NA	NA	False	AATAAA	-9	NA	151409883	151460100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_151409940_151410413_151410528_151411259_151411339_151414822_151414920_151416560_151416689_151416806_151416902_151420189_151420380_151422949_151423043_151428783_151428923_151433076_151433229_151435462_151435581_151436826_151437004_151437240_151437352_151438683_151438747_151440026_151440128_151441904_151441992_151443258_151443330_151443528_151443710_151445337_151445446_151446425_151446576_151451605_151451706_151454894_151455160_151456577_151456621_151457760_151457964_151458810_151458911_151459999
transcript_119912.nnic	chr2	+	3190	26	NNC	ENSG00000080345.18	novel	8053	35	NA	NA	0	4990	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_16	27.8086605214994	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAAACCAGCAGCCAAAG	151398699	True	NA	NA	False	AATAAA	-9	NA	151409885	151460100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_151410034_151410413_151410528_151411259_151411339_151414822_151414920_151416560_151416689_151416806_151416902_151420189_151420380_151422949_151423043_151428783_151428923_151433076_151433229_151435462_151435581_151436826_151437004_151437240_151437352_151438683_151438747_151440026_151440128_151441904_151441968_151443258_151443330_151443528_151443710_151445337_151445446_151446425_151446576_151451605_151451706_151454894_151455160_151456577_151456621_151457760_151457964_151458810_151458911_151459999
transcript_119919.nnic	chr2	+	3547	25	NNC	ENSG00000080345.18	novel	7992	34	NA	NA	7	4990	intron_retention	FALSE	canonical	3	29	junction_15	24.9115100572674	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAAACCAGCAGCCAAAG	151398722	True	NA	NA	False	AATAAA	-9	NA	151409908	151460100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_151410528_151411259_151411339_151414822_151414920_151416560_151416689_151416806_151416902_151420189_151420380_151422949_151423043_151428783_151428923_151433076_151433229_151435462_151435581_151436826_151437004_151437240_151437352_151438683_151438747_151440026_151440128_151441904_151441968_151443258_151443330_151443528_151443710_151445337_151445446_151446425_151446576_151451605_151451706_151454894_151455160_151456577_151456621_151457760_151457964_151458810_151458911_151459999
transcript_119920.nic	chr2	+	3571	25	ISM	ENSG00000080345.18	ENST00000430328.6	7992	34	-181	15288	7	4990	5prime_fragment	FALSE	canonical	0	0	junction_15	29.4830165330634	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAAACCAGCAGCCAAAG	151398722	True	NA	NA	False	AATAAA	-9	NA	151409908	151460100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_151410528_151411259_151411339_151414822_151414920_151416560_151416689_151416806_151416902_151420189_151420380_151422949_151423043_151428783_151428923_151433076_151433229_151435462_151435581_151436826_151437004_151437240_151437352_151438683_151438747_151440026_151440128_151441904_151441992_151443258_151443330_151443528_151443710_151445337_151445446_151446425_151446576_151451605_151451706_151454894_151455160_151456577_151456621_151457760_151457964_151458810_151458911_151459999
transcript_11994.known	chr1	-	752	2	FSM	ENSG00000007341.19	ENST00000470683.1	752	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGTTTGTGATATTTTGT	-112615855	True	NA	1	True	AATAAA	-21	NA	112619111	112610454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_112611004_112618908
transcript_119941.nic	chr2	+	1227	7	ISM	ENSG00000080345.18	ENST00000453091.6	8053	35	3	54867	0	376	5prime_fragment	FALSE	canonical	3	50	junction_1	30.3406584561963	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCTGGGCATATTGGTA	151398699	True	NA	NA	False	NA	NA	NA	151409885	151420755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_151410034_151410413_151410528_151411259_151411339_151414822_151414920_151416560_151416689_151416806_151416902_151420189
transcript_119943.nnic	chr2	-	1579	6	FSM	ENSG00000162980.17	ENST00000295087.13	5264	6	-110	3795	-39	390	multi-exon	FALSE	canonical	3	522	junction_5	24.204131878669	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGACATTGTGTATCGAT	-151820227	False	NA	NA	False	AAAAAG	-13	NA	151828531	151802591	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_151803325_151806820_151806973_151812356_151812441_151814168_151814317_151815138_151815200_151828130
transcript_119950.known	chr2	-	1076	7	FSM	ENSG00000162980.17	ENST00000458140.6	1076	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	274.333535844397	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAATTTTAAGAGCTTT	-151820188	True	NA	NA	False	NA	NA	NA	151828492	151802981	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_151803325_151806820_151806973_151810377_151810562_151812356_151812441_151814168_151814317_151815138_151815200_151828388
transcript_119952.nic	chr2	-	1747	7	NIC	ENSG00000162980.17	novel	1076	7	NA	NA	-23	390	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	252.479482114664	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGACATTGTGTATCGAT	-151820211	True	NA	NA	False	AAAAAG	-13	NA	151828515	151802591	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_151803325_151806820_151806973_151810377_151810562_151812356_151812441_151814168_151814317_151815138_151815200_151828130
transcript_119956.known	chr2	-	5264	6	FSM	ENSG00000162980.17	ENST00000295087.13	5264	6	0	0	0	0	multi-exon	FALSE	canonical	3	522	junction_5	24.204131878669	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTATGGCTTGTCTTAACT	-151820117	True	NA	0	True	AATAAA	-22	NA	151828421	151798796	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_151803325_151806820_151806973_151812356_151812441_151814168_151814317_151815138_151815200_151828130
transcript_119957.known	chr2	-	747	6	FSM	ENSG00000162980.17	ENST00000428992.2	747	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	223.0187436069	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTCTCATTAGTTTT	-151820164	True	NA	NA	False	AAAACA	-23	NA	151828468	151803102	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_151803325_151806820_151806973_151812356_151812441_151814168_151814317_151815138_151815200_151828388
transcript_119962.known	chr2	-	696	2	FSM	ENSG00000162980.17	ENST00000487723.1	696	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATTAGACACAGTTTTTG	-151820161	True	NA	NA	False	NA	NA	NA	151828465	151827479	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_151827841_151828130
transcript_119966.nnic	chr2	-	3587	15	NNC	ENSG00000115145.10	novel	5472	14	NA	NA	-13	-1798	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	11.7995589678909	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCATGTATAATTGTGA	-152175765	False	NA	-10	True	AATAAA	-19	NA	152175776	152118598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_152120186_152120285_152120803_152123765_152123936_152126225_152126380_152132113_152132169_152133172_152133261_152133401_152133485_152135508_152135604_152143826_152144014_152144887_152144958_152147161_152147309_152148023_152148123_152148224_152148301_152150144_152150230_152175602
transcript_119967.known	chr2	-	5472	14	FSM	ENSG00000115145.10	ENST00000263904.5	5472	14	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	4.64987115683305	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTATCTGTAATTT	-152175752	False	NA	0	True	AATAAA	-17	NA	152175763	152116800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_152120803_152123765_152123936_152126225_152126380_152132113_152132169_152133172_152133261_152133401_152133485_152135508_152135604_152143826_152144014_152144887_152144958_152147161_152147309_152148023_152148123_152148224_152148301_152150144_152150230_152175602
transcript_119971.nnic	chr2	+	5675	27	NNC	ENSG00000157827.20	novel	5630	26	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	1	30	junction_26	25.0123342354392	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTGTAATATGTTGTAA	152329776	True	NA	21	True	AATAAA	-14	NA	152335173	152649824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_152335721_152521942_152522027_152542738_152542820_152549020_152549098_152558739_152558824_152560882_152561036_152575135_152575245_152578887_152578965_152580955_152581050_152607338_152607414_152611494_152611606_152614850_152615001_152617090_152617193_152618845_152619159_152619508_152619719_152625437_152625563_152626524_152626728_152628298_152628534_152629655_152629725_152629824_152629906_152632007_152632138_152636426_152636591_152637572_152637675_152639957_152640057_152640790_152640915_152645433_152645481_152647795
transcript_119973.known	chr2	+	5630	26	FSM	ENSG00000157827.20	ENST00000288670.14	5630	26	0	0	0	0	multi-exon	FALSE	canonical	1	36	junction_19	22.6627447587445	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTAATATGTTGTAATC	152329776	True	NA	23	True	AATAAA	-16	NA	152335173	152649826	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_152335721_152521942_152522027_152542738_152542820_152549020_152549098_152558739_152558824_152560882_152561036_152575135_152575245_152578887_152578965_152580955_152581050_152607338_152607414_152611494_152611606_152614850_152615001_152617090_152617193_152618845_152619159_152619508_152619719_152625437_152625563_152626524_152626728_152628298_152628534_152629655_152629725_152629824_152629906_152632007_152632138_152636426_152636591_152637572_152637675_152639957_152640057_152640790_152640915_152647795
transcript_119979.nic	chr2	+	1868	14	ISM	ENSG00000157827.20	ENST00000288670.14	5630	26	-78	30935	-78	-7813	5prime_fragment	FALSE	canonical	3	60	junction_7	7.600996508945	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGGTCAAAGAAAAAGAAGAA	NA	False	NA	-14	True	AAGAAA	-3	NA	152335095	152618891	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_152335721_152521942_152522027_152542738_152542820_152549020_152549098_152558739_152558824_152560882_152561036_152575135_152575245_152578887_152578965_152580955_152581050_152607338_152607414_152611494_152611606_152614850_152615001_152617090_152617193_152618845
transcript_119980.nic	chr2	+	1866	14	ISM	ENSG00000157827.20	ENST00000288670.14	5630	26	-24	30883	-24	-7761	5prime_fragment	FALSE	canonical	3	60	junction_7	7.600996508945	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTCATGAGCTAGAGAAAC	152329752	True	NA	38	True	AAAAAG	-38	NA	152335149	152618943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_152335721_152521942_152522027_152542738_152542820_152549020_152549098_152558739_152558824_152560882_152561036_152575135_152575245_152578887_152578965_152580955_152581050_152607338_152607414_152611494_152611606_152614850_152615001_152617090_152617193_152618845
transcript_119986.nic	chr2	+	2875	4	ISM	ENSG00000157827.20	ENST00000288670.14	5630	26	-24	98667	-24	-56494	5prime_fragment	FALSE	canonical	3	64	junction_1	7.40870359029762	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTCTTTAAGCATTGCC	152329752	True	NA	NA	False	NA	NA	NA	152335149	152551159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_152335721_152521942_152522027_152542738_152542820_152549020
transcript_12.known	ERCC-00039	+	724	1	FSM	ERCC-00039A	DQ883656	724	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	724	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00039_+_0_700
transcript_1200.nic	chr1	-	642	4	NIC	ENSG00000248333.9	novel	881	9	NA	NA	-93	-10704	intron_retention	FALSE	canonical	3	34	junction_2	35.4432253360529	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAACGTAGGCATCGTAG	-1659087	False	NA	-15	True	AAAAAG	-30	NA	1659105	1652475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_1652567_1655368_1655485_1657255_1657499_1658913
transcript_120019.nic	chr2	-	1895	14	NIC	ENSG00000196504.19	novel	1622	14	NA	NA	-261	0	combination_of_known_junctions	FALSE	canonical	3	75	junction_13	242.01621051873	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGCAAGATCAAAGTACAA	-152718158	False	NA	-87	True	TATAAA	-28	NA	152718258	152672547	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_152672624_152672977_152673043_152673597_152673707_152676404_152676780_152677450_152677476_152679055_152679110_152679351_152679473_152681225_152681337_152690961_152690979_152693037_152693069_152694541_152694623_152715994_152716127_152717355_152717626_152717830
transcript_120021.known	chr2	-	1408	13	FSM	ENSG00000196504.19	ENST00000545856.7	1408	13	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_12	196.605498962319	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAGAAAAAGAAGAA	-152700871	True	NA	-104	True	TATAAA	-11	NA	152717457	152672564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_152672624_152672977_152673043_152673597_152673707_152676404_152676780_152677450_152677476_152679055_152679110_152679351_152679473_152681225_152681337_152690961_152690979_152693037_152693069_152694541_152694623_152715994_152716127_152717229
transcript_120035.known	chr2	+	479	5	FSM	ENSG00000177917.12	ENST00000691702.1	2176	5	917	780	-39	109	multi-exon	FALSE	canonical	3	26	junction_3	360.721499220659	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTTTGTAATAACAAGAAG	152718907	False	NA	NA	False	NA	NA	NA	152718918	152759882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_152719025_152720532_152720587_152732530_152732581_152734993_152735127_152759746
transcript_120037.known	chr2	+	465	5	FSM	ENSG00000177917.12	ENST00000425034.6	1681	5	405	811	1	78	multi-exon	FALSE	canonical	2	11	junction_1	348.289660340355	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGATATTGTTGGCAAAAC	152718947	False	NA	NA	False	NA	NA	NA	152718958	152759851	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_152719025_152719897_152720005_152720532_152720587_152734993_152735127_152759746
transcript_120041.known	chr2	+	3242	4	FSM	ENSG00000177917.12	ENST00000326446.10	3242	4	0	0	0	0	multi-exon	FALSE	canonical	3	707	junction_2	33.0689515339624	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGCTTTTGTCATTTGC	152709428	True	NA	16	True	AATAAA	-28	NA	152718619	152762396	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_152719025_152720532_152720587_152734993_152735127_152759746
transcript_120047.known	chr2	+	1308	4	FSM	ENSG00000177917.12	ENST00000686839.1	1308	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	320.350849330334	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTATGTGAGAATGATT	152717861	False	NA	9	True	AATAAA	-15	NA	152717892	152760764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_152717996_152720532_152720587_152734993_152735127_152759746
transcript_120056.known	chr2	-	1425	1	FSM	ENSG00000177519.4	ENST00000325926.4	1425	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCCTGGCCTCCTGGTGG	-153477708	True	NA	-9	True	AATAAA	-19	NA	153478762	153477337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_153477300_153478800
transcript_120057.known	chr2	+	5657	13	FSM	ENSG00000144278.15	ENST00000392825.8	5657	13	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_8	22.0735827530457	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTGCTTCATTAAGCTA	153870663	True	NA	NA	False	ATTAAA	-17	NA	153871921	154453979	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_153872304_153900935_153901008_153944393_153944640_154140336_154140506_154242029_154242197_154242697_154242906_154245811_154245983_154259020_154259139_154301408_154301590_154395990_154396131_154408983_154409083_154438591_154438727_154450410
transcript_120071.known	chr2	-	2642	8	FSM	ENSG00000153234.15	ENST00000426264.5	2642	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.27775312999988	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACATAAAAAAGGGACAAGC	-156332606	False	108	NA	False	AATAAA	-1	NA	156332714	156325081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_156326001_156326149_156326329_156326717_156326921_156327850_156328015_156328403_156328534_156329322_156330011_156330667_156330792_156332479
transcript_120072.known	chr2	-	3472	8	FSM	ENSG00000153234.15	ENST00000339562.9	3472	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	1.27775312999988	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAATTTTGTCTTCTTTTT	-156332613	False	108	NA	False	AATAAA	-14	NA	156332721	156324436	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_156326001_156326149_156326329_156326717_156326921_156327850_156328015_156328403_156328534_156329322_156330189_156330667_156330792_156332479
transcript_120075.known	chr2	+	6041	17	FSM	ENSG00000115159.16	ENST00000310454.10	6041	17	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_1	29.4013179976681	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAATTCTTTTTTCCTTT	156435419	False	NA	13	True	NA	NA	NA	156435440	156586403	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_156435805_156476097_156476208_156496043_156496216_156510795_156510921_156512219_156512318_156513332_156513497_156549607_156549773_156550601_156550747_156557388_156557583_156568824_156568960_156569362_156569539_156570086_156570219_156571133_156571293_156578888_156579002_156579085_156579165_156579689_156579789_156582792
transcript_120078.known	chr2	+	5812	17	FSM	ENSG00000115159.16	ENST00000438166.7	5812	17	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	22.2920950114609	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAATTCTTTTTTCCTTT	156434656	True	NA	13	True	NA	NA	NA	156436378	156586403	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_156436514_156476097_156476208_156496043_156496216_156510795_156510921_156512219_156512318_156513332_156513497_156549607_156549773_156550601_156550747_156557388_156557583_156568824_156568960_156569362_156569539_156570086_156570219_156571133_156571293_156578888_156579002_156579085_156579165_156579689_156579789_156582792
transcript_120089.known	chr2	-	2921	11	FSM	ENSG00000115170.16	ENST00000684348.1	2921	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	24.3	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTCAAGTCAAACAGTG	-157875863	False	NA	-25	True	AATAAA	-2	NA	157875880	157736460	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_157737666_157738439_157738571_157760879_157761078_157765920_157766197_157770367_157770515_157774087_157774188_157778130_157778343_157780336_157780601_157799426_157799501_157818384_157818560_157875741
transcript_120090.known	chr2	-	3332	11	FSM	ENSG00000115170.16	ENST00000434821.7	3332	11	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_6	11.7919464042201	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGAAATTGTTTTTCAAA	-157875401	True	NA	-10	True	AATAAA	-17	NA	157876330	157736445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_157737666_157738439_157738571_157760879_157761078_157765920_157766197_157770367_157770515_157774087_157774188_157778130_157778343_157780336_157780601_157799426_157799501_157818384_157818560_157875795
transcript_120096.known	chr2	+	5777	21	FSM	ENSG00000144283.23	ENST00000389757.7	5777	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	32.8199634369083	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGATACAAAAGTGCATCAT	158457087	False	NA	NA	False	AAGAAA	-18	NA	158457098	158682879	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_158457219_158533179_158533317_158577270_158577384_158603069_158603105_158620989_158621122_158621230_158621422_158624877_158625428_158631752_158631942_158634069_158634290_158640626_158640760_158642485_158642700_158658130_158658315_158661332_158661451_158662896_158663089_158663271_158663446_158666412_158666564_158669719_158669916_158673676_158673762_158673882_158674001_158678580_158678655_158680428
transcript_1201.nic	chr1	-	703	4	ISM	ENSG00000248333.9	ENST00000611150.3	2350	19	-273	16738	-273	-10704	5prime_fragment	FALSE	canonical	3	95	junction_3	9.7410927974683	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAACGTAGGCATCGTAG	NA	False	NA	-15	True	AAAAAG	-30	NA	1659285	1652475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_1652567_1655368_1655485_1657374_1657499_1658913
transcript_120106.nic	chr2	+	2656	14	ISM	ENSG00000144283.23	ENST00000389759.8	4603	22	-66	18426	-66	0	5prime_fragment	FALSE	canonical	0	0	junction_9	26.9654611433692	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAGTCTCCCAGCAAAG	158455111	True	NA	NA	False	NA	NA	NA	158456885	158663003	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_158457219_158533179_158533317_158577270_158577384_158603069_158603105_158620989_158621122_158621230_158621422_158624877_158625428_158631752_158631942_158634069_158634290_158640626_158640760_158642485_158642700_158658130_158658315_158661332_158661451_158662896
transcript_120110.known	chr2	+	2359	13	FSM	ENSG00000144283.23	ENST00000452162.5	2359	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	31.7125763696361	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGACTCCGCAAGAAGATC	158457117	False	NA	NA	False	AAAAAG	-6	NA	158457132	158663066	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_158457219_158533179_158533317_158603069_158603105_158620989_158621122_158621230_158621422_158624877_158625428_158631752_158631942_158634069_158634290_158640626_158640760_158642485_158642700_158658130_158658315_158661332_158661451_158662896
transcript_120124.known	chr2	-	1811	11	FSM	ENSG00000196151.11	ENST00000359774.9	1811	11	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_7	11.3154761278525	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAGTGTCCTAAGTTTTT	-159286056	True	NA	-4	True	AATAAA	-14	NA	159286703	159235797	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_159236191_159248371_159248513_159256195_159256376_159257757_159257865_159257944_159257986_159259809_159259844_159271701_159271796_159275545_159275639_159279760_159279946_159282671_159283094_159286582
transcript_120129.known	chr2	-	1535	7	FSM	ENSG00000196151.11	ENST00000358147.8	1535	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	26.2578030730338	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAGTGTCCTAAGTTTTT	-159286056	True	NA	-4	True	AATAAA	-14	NA	159286703	159235797	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_159236191_159248371_159248513_159256195_159256376_159275545_159275639_159279760_159279946_159282671_159283094_159286582
transcript_120142.known	chr2	+	1494	2	FSM	ENSG00000224152.2	ENST00000686508.1	3051	2	2	1555	2	1	multi-exon	FALSE	canonical	3	17	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAGTCGTTTTAAAGTT	159615086	True	NA	12	True	AATAAA	-19	NA	159615295	159617082	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_159615454_159615746
transcript_120144.known	chr2	-	2520	3	FSM	ENSG00000226266.7	ENST00000607836.1	2520	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	4.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAAAAGAAAAAAAATT	-159712024	True	NA	NA	False	NA	NA	NA	159712435	159693200	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_159695421_159710716_159710895_159712313
transcript_120148.known	chr2	+	5922	10	FSM	ENSG00000136536.15	ENST00000259050.8	5922	10	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_1	174.779861540167	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTTGTACTTAAGTGT	159700180	True	NA	12	True	AATAAA	-27	NA	159712498	159771027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_159712607_159729008_159729176_159743060_159743254_159745769_159745938_159747804_159748904_159752401_159752572_159759225_159759336_159762879_159762994_159764625_159764675_159767283
transcript_120160.nic	chr2	-	2098	15	NIC	ENSG00000153250.21	novel	4016	16	NA	NA	-73	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_14	89.6934689224747	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAACTTCAATTTT	-160492637	True	NA	NA	False	AAAAAG	-18	NA	160493880	160274459	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_160274765_160275629_160275715_160277302_160277384_160278547_160278659_160281313_160281365_160282256_160282305_160284774_160284869_160284994_160285045_160286968_160287085_160300650_160300731_160303329_160303488_160313155_160313248_160318168_160318228_160367215_160367392_160493288
transcript_120163.nic	chr2	-	2089	15	NIC	ENSG00000153250.21	novel	4016	16	NA	NA	-73	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_14	90.1028040968895	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAACTTCAATTTT	-160492637	True	NA	NA	False	AAAAAG	-18	NA	160493880	160274459	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_160274765_160275629_160275715_160277302_160277384_160278547_160278659_160281313_160281365_160282256_160282305_160284774_160284869_160284994_160285045_160286977_160287085_160300650_160300731_160303329_160303488_160313155_160313248_160318168_160318228_160367215_160367392_160493288
transcript_120168.known	chr2	-	4286	14	FSM	ENSG00000153250.21	ENST00000348849.8	4286	14	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_13	74.9998816567114	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCCTGTCAATTTTTTT	-160492564	True	NA	-4	True	AATAAA	-18	NA	160493807	160272150	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_160274765_160275629_160275715_160277302_160277384_160278547_160278659_160281313_160281365_160284774_160284869_160284994_160285045_160286968_160287085_160300650_160300731_160303329_160303488_160313155_160313248_160318168_160318228_160367215_160367392_160493288
transcript_120169.known	chr2	-	1815	14	FSM	ENSG00000153250.21	ENST00000409972.5	1815	14	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_13	69.9869810378538	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAACAAAAGATTTTTAT	-160406412	True	NA	NA	False	AGTAAA	-18	NA	160407889	160274519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_160274765_160275629_160275715_160277302_160277384_160278547_160278659_160281313_160281365_160284774_160284869_160284994_160285045_160286977_160287085_160300650_160300731_160303329_160303488_160313155_160313248_160318168_160318228_160367215_160367392_160407463
transcript_120171.nic	chr2	-	2041	14	NIC	ENSG00000153250.21	novel	1550	14	NA	NA	-73	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_13	75.6178495568185	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAACTTCAATTTT	-160492637	True	NA	NA	False	AAAAAG	-18	NA	160493880	160274459	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_160274765_160275629_160275715_160277302_160277384_160278547_160278659_160281313_160281365_160284774_160284869_160284994_160285045_160286977_160287085_160300650_160300731_160303329_160303488_160313155_160313248_160318168_160318228_160367215_160367392_160493288
transcript_120181.known	chr2	+	2098	8	FSM	ENSG00000136560.14	ENST00000392749.7	2098	8	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	32.4685090762211	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAAGGAAGGAATCACATT	161157773	True	NA	61	True	AGTAAA	-17	NA	161160427	161236230	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_161160487_161179613_161179762_161203486_161203596_161204674_161204794_161223914_161223992_161224630_161224747_161230970_161231552_161235341
transcript_120185.known	chr2	+	550	4	FSM	ENSG00000136560.14	ENST00000440506.5	550	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	59.2977421342687	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTACCAAAGGTAGACAT	161157644	True	NA	NA	False	GATAAA	-25	NA	161160298	161204781	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_161160485_161179613_161179762_161203486_161203596_161204674
transcript_120195.known	chr2	+	1567	12	FSM	ENSG00000115233.12	ENST00000409682.8	1567	12	0	0	0	0	multi-exon	FALSE	canonical	3	1501	junction_5	96.697620198566	397	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCCTGAGATCTTTTTG	161293298	True	NA	14	True	AATAAA	-17	NA	161308424	161411717	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_161308605_161316436_161316570_161318821_161318874_161367477_161367550_161367783_161367904_161370106_161370178_161371171_161371323_161385463_161385572_161391103_161391179_161395077_161395204_161408836_161408900_161411301
transcript_120197.known	chr2	-	3749	26	FSM	ENSG00000197635.11	ENST00000676810.1	3749	26	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_24	5.80289582880823	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGACTTGTGTCTTGAA	-162074175	True	NA	-2	True	AATAAA	-22	NA	162074394	161992244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_161993385_161994960_161995035_161995299_161995373_162005744_162005810_162008561_162008662_162009240_162009296_162011792_162011988_162014395_162014466_162016767_162016867_162017107_162017156_162018728_162018851_162019222_162019277_162020228_162020297_162020580_162020689_162022754_162022800_162024803_162024940_162033540_162033654_162035163_162035325_162038301_162038423_162038948_162039022_162039131_162039185_162045531_162045613_162046914_162047007_162047402_162047499_162073398_162073487_162073975
transcript_120200.known	chr2	+	3651	8	FSM	ENSG00000115271.11	ENST00000437150.7	3651	8	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_6	24.5639523509968	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTCTTTGTCTTTTTAC	162340114	True	NA	NA	False	AATAAA	-17	NA	162344131	162363123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_162344276_162347577_162347743_162352337_162352408_162356437_162356482_162356757_162356906_162359043_162359158_162359493_162359553_162360216
transcript_120213.known	chr2	-	2415	14	FSM	ENSG00000115290.10	ENST00000263915.8	2415	14	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_9	61.5061453609293	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGTATTGTACCCATTA	-164620669	True	NA	NA	False	ATTAAA	-20	NA	164621482	164492416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_164493183_164494430_164494525_164497007_164497096_164497210_164497284_164497373_164497491_164502254_164502336_164508454_164508551_164508741_164508853_164521979_164522118_164525003_164525079_164527013_164527136_164547659_164547817_164619686_164619820_164621118
transcript_120214.known	chr2	-	1983	14	FSM	ENSG00000115290.10	ENST00000488342.5	1983	14	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_7	69.1346341071976	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTGTTCTTGTGTGAT	-164621366	False	NA	0	True	ATTAAA	-19	NA	164621392	164492811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_164493183_164494430_164494525_164497007_164497096_164497210_164497284_164497373_164497491_164502254_164502336_164508454_164508604_164508741_164508853_164521979_164522118_164525003_164525079_164527013_164527136_164547659_164547817_164619686_164619820_164621118
transcript_120221.known	chr2	+	11737	7	FSM	ENSG00000178662.16	ENST00000651982.1	11737	7	0	0	0	0	multi-exon	TRUE	canonical	1	5	junction_3	9.17726659862414	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACTGTTGCATTTCTGTT	165468142	True	NA	10	True	AGTAAA	-19	NA	165469697	165689407	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_165469741_165494758_165494929_165517872_165517962_165595042_165595214_165657760_165658021_165676311_165676609_165678700
transcript_120224.known	chr2	+	499	4	FSM	ENSG00000178662.16	ENST00000464503.1	499	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	6.37704215656966	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAAGTATTTGTGGATTT	165468150	True	NA	5	True	AATAAA	-18	NA	165469705	165566981	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_165469741_165494758_165494929_165517872_165517962_165566776
transcript_120227.known	chr2	-	3436	11	FSM	ENSG00000115339.14	ENST00000392701.8	3436	11	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_6	19.9170780989582	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAATGATGTTTTAAAAAA	-165791531	True	NA	NA	False	GATAAA	-18	NA	165794247	165747587	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_165748904_165749741_165749895_165754626_165754729_165754931_165755064_165757046_165757248_165758746_165758865_165759335_165759571_165761904_165762055_165764883_165765057_165770185_165770809_165794014
transcript_120228.known	chr2	-	5415	29	FSM	ENSG00000123607.16	ENST00000243344.8	5415	29	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_19	12.7201030030485	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTGCTTTTTATTAAAT	-165951277	True	NA	1	True	AATAAA	-17	NA	165953776	165873361	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_165874833_165876164_165876233_165880678_165880800_165883793_165884019_165888278_165888475_165890478_165890641_165890837_165890989_165898685_165898768_165899769_165899881_165901721_165901911_165907677_165907785_165911326_165911466_165912513_165912625_165913573_165913647_165915200_165915440_165917256_165917482_165919275_165919434_165924548_165924679_165929134_165929336_165929649_165929748_165930171_165930365_165931757_165931857_165932972_165933058_165941026_165941185_165943218_165943342_165945523_165945691_165949393_165949505_165949594_165949725_165953684
transcript_120231.known	chr2	-	12072	31	FSM	ENSG00000123607.16	ENST00000681024.1	12072	31	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	31.3479398578811	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAAGTCTTCATTAAATT	-165951322	True	NA	NA	False	AATATA	-8	NA	165953821	165857492	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_165857615_165858214_165858405_165870796_165874833_165876164_165879968_165880678_165880800_165883793_165884019_165888278_165888475_165890478_165890641_165890837_165890989_165898685_165898768_165899769_165899881_165901721_165901911_165907677_165907785_165911326_165911466_165912513_165912625_165913573_165913647_165915200_165915440_165917256_165917482_165919275_165919434_165924548_165924679_165929134_165929336_165929649_165929748_165930171_165930365_165931757_165931857_165932972_165933058_165941026_165941185_165943218_165943342_165945523_165945691_165949393_165949505_165949594_165949725_165953684
transcript_120232.known	chr2	-	5722	27	FSM	ENSG00000123607.16	ENST00000679840.1	5722	27	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_17	13.1162869078303	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGTCTCTACTAAAAATACA	-165951317	True	NA	NA	False	NA	NA	NA	165953816	165878872	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_165880800_165883793_165884019_165888278_165888475_165890478_165890641_165890837_165890989_165898685_165898768_165899769_165899881_165901721_165901911_165907677_165907785_165911326_165911466_165912513_165912625_165913573_165913647_165915200_165915440_165917256_165917482_165919275_165919434_165924548_165924679_165929134_165929336_165929649_165929748_165930171_165930365_165931757_165931857_165932972_165933058_165941026_165941185_165943218_165943342_165945523_165945691_165949393_165949505_165949594_165949725_165953684
transcript_120236.known	chr2	-	1844	11	FSM	ENSG00000123607.16	ENST00000464374.5	1844	11	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	14.0317497127051	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAAAGGACCATT	-165951246	True	NA	NA	False	NA	NA	NA	165953745	165928716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_165929336_165929649_165929748_165930171_165930365_165931757_165931857_165932972_165933058_165941026_165941185_165943218_165943342_165945523_165945691_165949393_165949505_165949594_165949725_165953684
transcript_120239.known	chr2	-	3231	15	FSM	ENSG00000169432.19	ENST00000454569.6	3231	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	6.43055524945759	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTCTAATATGCTAGATT	-166374103	True	NA	NA	False	AATAAA	-17	NA	166375969	166277715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_166278314_166280356_166280596_166281678_166281809_166284485_166284825_166286335_166286624_166288436_166288644_166293230_166293373_166294598_166294663_166303089_166303303_166304237_166304330_166305791_166305921_166306509_166306600_166306955_166307075_166311498_166311807_166375696
transcript_120241.nic	chr2	-	1834	11	ISM	ENSG00000169432.19	ENST00000454569.6	3231	15	-63	8774	-31	2125	5prime_fragment	FALSE	canonical	0	0	junction_8	7.1805292284065	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATCAAAAGAAGCTCTCCA	-166374166	True	NA	NA	False	AAGAAA	-23	NA	166376032	166286489	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_166286624_166288436_166288644_166293230_166293373_166294598_166294663_166303089_166303303_166304237_166304330_166305791_166305921_166306509_166306600_166306955_166307075_166311498_166311807_166375696
transcript_120249.known	chr2	+	462	3	FSM	ENSG00000228222.1	ENST00000442316.1	462	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	32	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCGAATAGGAACAGCTCC	167290362	False	NA	NA	False	NA	NA	NA	167293170	167558333	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_167293335_167490176_167490278_167558136
transcript_120251.nic	chr2	+	1982	2	ISM	ENSG00000228222.1	ENST00000442316.1	462	3	-167	66506	-167	-66506	5prime_fragment	FALSE	canonical	3	64	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATTTTATGTTTTCAGAA	167290195	True	NA	NA	False	NA	NA	NA	167293003	167491827	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_167293335_167490176
transcript_120253.nnic	chr2	+	2045	5	FSM	ENSG00000172318.6	ENST00000392690.4	5850	5	-16	3821	-16	-3821	multi-exon	FALSE	canonical	3	40	junction_3	9.12071817347735	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCATTCTCAGTCCCAG	167290176	True	NA	NA	False	AATAAA	-17	NA	167292984	167870224	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_167293335_167490176_167490278_167646908_167646967_167818671_167818794_167868810
transcript_120254.nnic	chr2	+	2195	5	FSM	ENSG00000172318.6	ENST00000392690.4	5850	5	-16	3671	-16	-3671	multi-exon	FALSE	canonical	3	40	junction_3	9.12071817347735	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAATACACAAATAGAAACC	167290176	True	NA	NA	False	NA	NA	NA	167292984	167870374	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_167293335_167490176_167490278_167646908_167646967_167818671_167818794_167868810
transcript_120258.known	chr2	+	6804	10	FSM	ENSG00000172292.15	ENST00000305747.11	6804	10	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	13.4421485642992	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAAGTGCCCTTTACTGT	168454738	True	NA	10	True	AATAAA	-20	NA	168456271	168775134	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_168456619_168547595_168547702_168561191_168561323_168630984_168631043_168691033_168691085_168694958_168695052_168715000_168715130_168717871_168717979_168765591_168765749_168769509
transcript_120260.known	chr2	-	1342	7	FSM	ENSG00000152253.9	ENST00000282074.7	1342	7	0	0	0	0	multi-exon	FALSE	canonical	3	522	junction_4	27.8607649252892	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCAGCATGATTTATAATC	-168886874	True	NA	-4	True	AATAAA	-23	NA	168890430	168870890	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_168871556_168873584_168873684_168876071_168876177_168877237_168877385_168889225_168889292_168889386_168889534_168890317
transcript_120263.nic	chr2	-	413	4	ISM	ENSG00000152253.9	ENST00000282074.7	1342	7	-50	6457	-50	-110	5prime_fragment	FALSE	canonical	3	522	junction_1	34.9221356098901	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATAACTTGTTAAAATTGA	NA	False	NA	NA	False	AAGAAA	-5	NA	168890480	168877347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_168877385_168889225_168889292_168889386_168889534_168890317
transcript_120267.known	chr2	-	4200	15	FSM	ENSG00000138399.18	ENST00000453153.7	4200	15	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	112.564176706228	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTGTGATATAATCCC	-169569292	True	NA	-21	True	AATAAA	-16	NA	169573865	169528507	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_169529927_169530586_169530702_169531351_169531491_169537226_169537341_169538012_169538142_169540050_169540180_169544720_169544836_169546217_169546705_169555123_169555256_169557186_169557298_169560386_169560786_169563224_169563351_169569183_169569253_169571652_169572172_169573668
transcript_120270.nic	chr2	-	2863	14	NIC	ENSG00000138399.18	novel	4200	15	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	111.952018462687	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATAGGTACAAATGTC	-169569271	True	NA	-27	True	AATAAA	-17	NA	169573844	169529754	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_169529927_169530586_169530702_169531351_169531491_169537226_169537341_169538012_169538142_169540050_169540180_169544720_169544836_169546217_169546705_169555123_169555256_169557186_169557298_169560386_169560786_169563224_169563351_169571652_169572172_169573668
transcript_120272.known	chr2	-	2791	14	FSM	ENSG00000138399.18	ENST00000453929.6	2791	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	128.216255927334	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATAGGTACAAATGTC	-169569259	True	NA	-27	True	AATAAA	-17	NA	169573832	169529754	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_169529927_169530586_169530702_169531351_169531491_169537226_169537341_169540050_169540180_169544720_169544836_169546217_169546705_169555123_169555256_169557186_169557298_169560386_169560786_169563224_169563351_169569183_169569253_169571652_169572172_169573668
transcript_120283.nic	chr2	-	2501	12	ISM	ENSG00000138399.18	ENST00000453929.6	2791	14	-104	1704	-61	-1627	5prime_fragment	FALSE	canonical	0	0	junction_9	126.895284479529	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTTCCGTATGGAAGCCA	NA	False	NA	NA	False	GATAAA	-10	NA	169573936	169531458	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_169531491_169537226_169537341_169540050_169540180_169544720_169544836_169546217_169546705_169555123_169555256_169557186_169557298_169560386_169560786_169563224_169563351_169569183_169569253_169571652_169572172_169573668
transcript_120286.nic	chr2	-	2251	5	ISM	ENSG00000138399.18	ENST00000453929.6	2791	14	-12	29670	-12	846	5prime_fragment	FALSE	canonical	0	0	junction_2	128.703146814676	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAATTTTATATAATAGT	-169569271	True	NA	NA	False	AATAAA	-10	NA	169573844	169559424	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_169560786_169563224_169563351_169569183_169569253_169571652_169572172_169573668
transcript_120287.nic	chr2	-	1179	5	ISM	ENSG00000138399.18	ENST00000453929.6	2791	14	-45	30775	-2	0	5prime_fragment	FALSE	canonical	0	0	junction_2	128.703146814676	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTACAATTTAATAGTTT	-169569304	True	NA	-7	True	AGTAAA	-19	NA	169573877	169560529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_169560786_169563224_169563351_169569183_169569253_169571652_169572172_169573668
transcript_120289.known	chr2	-	1045	4	FSM	ENSG00000138399.18	ENST00000438035.5	1045	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	123.370264740829	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTACAATTTAATAGTTT	-169569239	True	NA	-7	True	AGTAAA	-19	NA	169573812	169560529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_169560786_169563224_169563351_169571652_169572172_169573668
transcript_12029.known	chr1	+	3552	21	FSM	ENSG00000155363.19	ENST00000369645.6	3380	21	-172	0	66	0	multi-exon	FALSE	canonical	3	147	junction_1	76.5364455668017	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGATAATGTCTCCTCT	112673931	True	NA	24	True	AAGAAA	-33	NA	112674486	112700739	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_112674730_112674847_112675050_112688934_112689139_112689414_112689651_112689839_112690099_112691664_112691800_112692760_112692930_112694017_112694173_112694452_112694630_112694748_112694897_112695415_112695575_112696147_112696252_112696436_112696535_112696629_112696847_112697993_112698112_112698286_112698479_112698714_112698790_112699684_112699811_112699893_112699983_112700218_112700341_112700415
transcript_120292.known	chr2	+	6357	14	FSM	ENSG00000138398.17	ENST00000260970.8	6357	14	0	0	0	0	multi-exon	FALSE	canonical	3	393	junction_1	43.6010694185116	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGGTTTTGTATTTTT	169576010	True	NA	NA	False	AATAAA	-16	NA	169584350	169641406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_169584491_169603641_169603695_169604025_169604103_169604186_169604262_169606038_169606147_169607103_169607149_169608670_169608759_169614463_169614494_169614584_169614725_169630773_169630988_169631765_169631934_169633159_169633248_169636091_169636229_169636412
transcript_120295.known	chr2	+	6453	14	FSM	ENSG00000138398.17	ENST00000678499.1	6453	14	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	103.058953657574	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTATACTATAATAAACAG	169584624	False	NA	NA	False	ATTAAA	-3	NA	169584646	169641389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_169584900_169603641_169603695_169604025_169604103_169604186_169604262_169606038_169606147_169607103_169607149_169608670_169608759_169614463_169614494_169614584_169614725_169630773_169630988_169631765_169631934_169633159_169633248_169636091_169636229_169636412
transcript_120299.known	chr2	+	7125	13	FSM	ENSG00000138398.17	ENST00000677392.1	7125	13	0	0	0	0	multi-exon	FALSE	canonical	3	393	junction_1	45.1616694652544	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAACTATACTATAATAAAC	169576001	True	NA	NA	False	ATTAAA	-1	NA	169584341	169641387	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_169584491_169603641_169603695_169604025_169604103_169604186_169604262_169606038_169606147_169607103_169607149_169608670_169608759_169614463_169614494_169614584_169614725_169630773_169631934_169633159_169633248_169636091_169636229_169636412
transcript_120304.nic	chr2	+	969	10	ISM	ENSG00000138398.17	ENST00000414307.6	1507	12	-11	2553	-11	82	5prime_fragment	FALSE	canonical	3	393	junction_1	34.4945871581307	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCGAAAGAAAAGCAAGAAGA	NA	False	NA	NA	False	AAAAAG	-45	NA	169584330	169630966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_169584491_169603641_169603695_169604025_169604103_169604186_169604262_169606038_169606147_169607103_169607149_169608670_169608759_169614463_169614494_169614584_169614725_169630773
transcript_120307.nic	chr2	+	1138	10	ISM	ENSG00000138398.17	ENST00000678638.1	2661	15	-229	7043	3	82	5prime_fragment	FALSE	canonical	3	121	junction_1	112.848417942383	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCGAAAGAAAAGCAAGAAGA	169584508	True	NA	NA	False	AAAAAG	-45	NA	169584570	169630966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_169584900_169603641_169603695_169604025_169604103_169604186_169604262_169606038_169606147_169607103_169607149_169608670_169608759_169614463_169614494_169614584_169614725_169630773
transcript_120308.nic	chr2	+	780	9	ISM	ENSG00000138398.17	ENST00000414307.6	1507	12	-11	18791	-11	3506	5prime_fragment	FALSE	canonical	3	393	junction_1	36.3040545256312	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAAGTACATATTTCTG	NA	False	NA	18	True	NA	NA	NA	169584330	169614728	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_169584491_169603641_169603695_169604025_169604103_169604186_169604262_169606038_169606147_169607103_169607149_169608670_169608759_169614463_169614494_169614584
transcript_120310.nic	chr2	+	949	9	ISM	ENSG00000138398.17	ENST00000678638.1	2661	15	-229	23281	3	3506	5prime_fragment	FALSE	canonical	3	121	junction_1	119.500980644512	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAAGTACATATTTCTG	169584508	True	NA	18	True	NA	NA	NA	169584570	169614728	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_169584900_169603641_169603695_169604025_169604103_169604186_169604262_169606038_169606147_169607103_169607149_169608670_169608759_169614463_169614494_169614584
transcript_120311.known	chr2	+	6150	11	FSM	ENSG00000138398.17	ENST00000676508.1	6150	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	191.560851950496	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGGTTTTGTATTTTT	169576003	True	NA	NA	False	AATAAA	-16	NA	169584343	169641406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_169584491_169606038_169606147_169607103_169607149_169608670_169608759_169614463_169614494_169614584_169614725_169630773_169630988_169631774_169631934_169633159_169633248_169636091_169636229_169636412
transcript_120315.known	chr2	+	908	4	FSM	ENSG00000144362.12	ENST00000438710.5	908	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	34.6153466286591	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATTATCATACTCATT	169692107	True	NA	NA	False	NA	NA	NA	169694470	169701378	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_169694742_169695214_169695248_169697360_169697532_169700945
transcript_120316.known	chr2	+	4081	4	FSM	ENSG00000213160.10	ENST00000392647.7	4081	4	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_1	18.9267594221045	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTAAGACTGCTTGAAT	169728347	True	NA	14	True	AATAAA	-15	NA	169733831	169751878	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_169734088_169735012_169736228_169741384_169741538_169749421
transcript_120319.nic	chr2	+	547	2	ISM	ENSG00000213160.10	ENST00000392647.7	4081	4	-52	16627	-52	-14249	5prime_fragment	FALSE	canonical	3	288	junction_1	0	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCTGGCATCCACCATGA	NA	False	NA	NA	False	AATAAA	-7	NA	169733779	169735251	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_169734088_169735012
transcript_120321.known	chr2	+	1650	12	FSM	ENSG00000138385.16	ENST00000260956.9	1650	12	0	0	0	0	multi-exon	FALSE	canonical	3	2994	junction_8	298.609892281878	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTTTGATTTTTTTTTT	169756822	True	NA	27	True	AATAAA	-28	NA	169798870	169812064	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_169798977_169800951_169801027_169805473_169805578_169805664_169805840_169806784_169806893_169806970_169807072_169808481_169808554_169808859_169808903_169810282_169810424_169810857_169811045_169811182_169811324_169811667
transcript_120322.known	chr2	+	1782	12	FSM	ENSG00000138385.16	ENST00000409333.1	1782	12	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	993.920062635367	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTTTGATTTTTTTTTT	169799229	False	NA	27	True	AATAAA	-28	NA	169799278	169812064	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_169799517_169800951_169801027_169805473_169805578_169805664_169805840_169806784_169806893_169806970_169807072_169808481_169808554_169808859_169808903_169810282_169810424_169810857_169811045_169811182_169811324_169811667
transcript_120329.nic	chr2	+	1132	10	ISM	ENSG00000138385.16	ENST00000260956.9	1650	12	-81	1081	-81	-61	5prime_fragment	FALSE	canonical	3	2994	junction_8	240.715343389676	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGCACTGAAGAAAATAAT	NA	False	NA	-39	True	NA	NA	NA	169798789	169810983	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_169798977_169800951_169801027_169805473_169805578_169805664_169805840_169806784_169806893_169806970_169807072_169808481_169808554_169808859_169808903_169810282_169810424_169810857
transcript_120332.nic	chr2	+	994	9	ISM	ENSG00000138385.16	ENST00000260956.9	1650	12	-81	1653	-81	0	5prime_fragment	FALSE	canonical	3	2994	junction_8	252.210446601643	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGCAAAAGAGGTTTGGAT	NA	False	NA	23	True	AATAAA	-20	NA	169798789	169810411	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_169798977_169800951_169801027_169805473_169805578_169805664_169805840_169806784_169806893_169806970_169807072_169808481_169808554_169808859_169808903_169810282
transcript_120334.nic	chr2	+	784	8	ISM	ENSG00000138385.16	ENST00000260956.9	1650	12	-22	3184	-22	214	5prime_fragment	FALSE	canonical	3	2995	junction_7	242.463462427321	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTAGAAGAAGATGCTGAAA	169756800	True	NA	5	True	AAAACA	-4	NA	169798848	169808880	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_169798977_169800951_169801027_169805473_169805578_169805664_169805840_169806784_169806893_169806970_169807072_169808481_169808554_169808859
transcript_120338.known	chr2	-	880	8	FSM	ENSG00000138382.15	ENST00000409965.5	880	8	0	0	0	0	multi-exon	FALSE	canonical	3	891	junction_7	249.242198412283	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGGTCTCCAGCACCAT	-169814861	True	NA	-18	True	AATAAA	-17	NA	169824925	169811756	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_169811859_169812456_169812507_169815476_169815529_169819560_169819644_169821091_169821274_169821942_169822058_169824488_169824641_169824781
transcript_120339.known	chr2	-	800	8	FSM	ENSG00000138382.15	ENST00000392640.6	800	8	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_7	395.239064829562	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGGTCTCCAGCACCAT	-169814867	True	NA	-18	True	AATAAA	-17	NA	169824931	169811756	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_169811859_169812456_169812507_169815476_169815529_169819560_169819644_169821091_169821274_169821942_169822058_169824488_169824641_169824867
transcript_120341.nic	chr2	+	823	7	ISM	ENSG00000138385.16	ENST00000260956.9	1650	12	-81	3510	-81	-112	5prime_fragment	FALSE	canonical	3	3028	junction_6	216.980029803052	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTATGTTGAACTAATCA	NA	False	NA	2	True	AATAAA	-28	NA	169798789	169808554	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_169798977_169800951_169801027_169805473_169805578_169805664_169805840_169806784_169806893_169806970_169807072_169808481
transcript_120343.known	chr2	-	1370	7	FSM	ENSG00000138382.15	ENST00000410097.5	1370	7	0	0	0	0	multi-exon	FALSE	canonical	3	891	junction_6	241.79496594337	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGCAAACAAAAGTCGTTTAA	-169814810	True	NA	-75	True	TTTAAA	-6	NA	169824874	169811813	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_169812507_169815476_169815529_169819560_169819644_169821091_169821274_169821942_169822058_169824488_169824641_169824781
transcript_120345.nic	chr2	+	750	6	ISM	ENSG00000138385.16	ENST00000260956.9	1650	12	-81	4993	-81	0	5prime_fragment	FALSE	canonical	3	3198	junction_5	162.019751882294	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCTTTTTGCTGATGT	NA	False	NA	11	True	AAGAAA	-23	NA	169798789	169807071	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_169798977_169800951_169801027_169805473_169805578_169805664_169805840_169806784_169806893_169806970
transcript_120349.known	chr2	-	472	6	FSM	ENSG00000138382.15	ENST00000409340.5	472	6	0	0	0	0	multi-exon	FALSE	canonical	2	28	junction_4	441.758033316883	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGGTCTCCAGCACCAT	-169814750	True	NA	-18	True	AATAAA	-17	NA	169824814	169811756	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_169811859_169812456_169812507_169815476_169815529_169819560_169819644_169824488_169824641_169824781
transcript_120356.known	chr2	+	619	4	FSM	ENSG00000138385.16	ENST00000461708.1	619	4	0	0	0	0	multi-exon	FALSE	canonical	3	3425	junction_3	100.748311262384	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTCACGTTGGAGTGCAG	169756831	True	NA	NA	False	NA	NA	NA	169798879	169806007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_169798977_169800951_169801027_169805473_169805578_169805664
transcript_120360.known	chr2	-	1001	7	FSM	ENSG00000138382.15	ENST00000260953.10	1001	7	0	0	0	0	multi-exon	FALSE	canonical	3	1001	junction_1	211.256360850981	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGGTCTCCAGCACCAT	-169814841	True	NA	-18	True	AATAAA	-17	NA	169824905	169811756	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_169811859_169812456_169812507_169815476_169815529_169819560_169819644_169821091_169821274_169821942_169822058_169824488
transcript_120361.known	chr2	-	2117	1	FSM	ENSG00000222033.1	ENST00000409786.1	2117	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATCAAAGTACAATATTTA	-170714551	False	NA	NA	False	ATTAAA	-15	NA	170714567	170712450	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_170712400_170714600
transcript_120362.known	chr2	+	2047	2	FSM	ENSG00000204335.4	ENST00000375281.4	2047	2	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGGAGGCTTCTTTGGTT	170715155	True	NA	101	True	NA	NA	NA	170715336	170718078	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_170715564_170716258
transcript_120364.known	chr2	+	257	2	FSM	ENSG00000204335.4	ENST00000487037.1	257	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGCCGCAGAAGACGCACC	170716012	False	NA	NA	False	GGGGCT	-1	NA	170716041	170716488	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_170716069_170716258
transcript_120366.known	chr2	+	1111	4	FSM	ENSG00000239467.7	ENST00000688829.1	1041	4	401	-471	61	0	multi-exon	FALSE	canonical	3	11	junction_1	8.73053390247253	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGACAGAGGACCTTAT	170770986	False	NA	8	True	ATTAAA	-22	NA	170771337	170778584	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_170771428_170777146_170777178_170777376_170777426_170777643
transcript_120367.known	chr2	+	1327	4	FSM	ENSG00000239467.7	ENST00000662201.2	1444	4	117	0	-21	0	multi-exon	FALSE	canonical	3	10	junction_1	9.20144916122817	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGTCTTTGAGGGATAT	170770675	True	NA	NA	False	AATAAA	-15	NA	170771026	170778729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_170771188_170777146_170777178_170777376_170777426_170777643
transcript_120368.known	chr2	+	1505	3	FSM	ENSG00000239467.7	ENST00000664870.2	1628	3	123	0	10	0	multi-exon	FALSE	canonical	3	3	junction_1	13.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGTCTTTGAGGGATAT	170770706	True	NA	NA	False	AATAAA	-15	NA	170771057	170778729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_170771428_170777376_170777426_170777643
transcript_120372.known	chr2	+	3279	17	FSM	ENSG00000128683.14	ENST00000358196.8	3279	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	3.65665061907752	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTCTAGTTTGTGTTT	170816768	True	NA	NA	False	AATAAA	-34	NA	170816886	170861151	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_170817049_170818528_170818674_170822086_170822150_170829474_170829634_170830949_170831193_170836792_170836884_170844044_170844158_170845505_170845622_170845705_170845786_170846008_170846064_170847675_170847793_170849285_170849351_170852713_170852793_170853872_170854023_170857017_170857126_170858803_170858894_170859708
transcript_120373.known	chr2	+	1029	7	FSM	ENSG00000128683.14	ENST00000344257.9	1029	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	2.21735578260835	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGGATCCTTCAGGATC	170816793	True	NA	7	True	AATAAA	-18	NA	170816911	170842759	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_170817049_170818528_170818674_170822086_170822150_170829474_170829634_170830949_170831193_170836792_170836884_170842568
transcript_120377.known	chr2	+	1976	11	FSM	ENSG00000115806.13	ENST00000442798.5	1976	11	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	438.517605119794	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTACACAGGAATTCCAC	170918741	True	NA	54	True	NA	NA	NA	170929320	170966623	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_170929404_170936623_170936728_170948349_170948431_170949538_170949743_170950203_170950291_170951327_170951459_170954649_170954783_170956435_170956560_170961662_170961750_170962838_170962947_170965789
transcript_120384.known	chr2	+	2447	10	FSM	ENSG00000115806.13	ENST00000234160.5	2447	10	0	0	0	0	multi-exon	FALSE	canonical	3	952	junction_9	84.9428275407482	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGTGCTTCCTCAGTTA	170918673	True	NA	12	True	ATTAAA	-29	NA	170929252	170967130	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_170929404_170948349_170948431_170949538_170949743_170950203_170950291_170951327_170951459_170954649_170954783_170956435_170956560_170961662_170961750_170962838_170962947_170965789
transcript_120397.known	chr2	+	951	8	FSM	ENSG00000115806.13	ENST00000493692.5	951	8	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_5	359.881896727019	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTTCTGCAGCAAGCTCA	170918673	True	NA	NA	False	NA	NA	NA	170929252	170965891	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_170929404_170948349_170948431_170949538_170949743_170950203_170950291_170951327_170951459_170961662_170961750_170962838_170962947_170965789
transcript_120404.known	chr2	-	5723	21	FSM	ENSG00000198586.14	ENST00000431350.7	5723	21	0	0	0	0	multi-exon	TRUE	canonical	3	167	junction_18	22.7953394359461	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGCTATTAGCTGTGTT	-171160879	False	629	-18	True	ATTAAA	-20	NA	171160893	170990822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_170993957_170996652_170996761_170997711_170997824_171006146_171006283_171006473_171006644_171006799_171006890_171006971_171007064_171011372_171011455_171014850_171014949_171028338_171028406_171046173_171046363_171049813_171049951_171050063_171050175_171053760_171053854_171055082_171055173_171056470_171056567_171058150_171058198_171061080_171061157_171082780_171082853_171117738_171117858_171160289
transcript_120410.nic	chr2	-	1568	10	ISM	ENSG00000198586.14	ENST00000359766.7	4321	23	-658	57979	-253	3584	5prime_fragment	FALSE	canonical	3	27	junction_7	77.0786034584898	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTACTTGAAAAATACAAAGA	-171161139	False	NA	NA	False	AATAGA	-14	NA	171161153	171050132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_171050175_171053760_171053854_171055082_171055173_171056470_171056567_171058150_171058198_171061080_171061157_171081639_171081709_171082780_171082853_171117738_171117858_171160289
transcript_120411.nic	chr2	-	1601	9	ISM	ENSG00000198586.14	ENST00000409443.6	2783	21	-355	53409	-355	3584	5prime_fragment	FALSE	canonical	3	167	junction_6	31.4831304034399	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTACTTGAAAAATACAAAGA	-171161241	False	NA	NA	False	AATAGA	-14	NA	171161255	171050132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_171050175_171053760_171053854_171055082_171055173_171056470_171056567_171058150_171058198_171061080_171061157_171082780_171082853_171117738_171117858_171160289
transcript_120422.nic	chr2	-	2409	11	NIC	ENSG00000123600.21	novel	9791	10	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	18	junction_10	38.5958546996954	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	171434801	171323250	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_171324363_171325840_171325907_171326041_171326149_171330558_171330699_171331803_171331868_171337452_171337503_171339183_171339555_171360421_171360514_171392042_171392198_171414602_171414727_171434673
transcript_120424.nic	chr2	-	1882	11	NIC	ENSG00000123600.21	novel	9770	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_10	36.9433349875184	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGACTCTTCCCATTGT	-171432288	True	NA	-4	True	AGTAAA	-16	NA	171434020	171323787	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_171324363_171325840_171325907_171326041_171326149_171330558_171330699_171331803_171331868_171337452_171337503_171339183_171339555_171360421_171360514_171392042_171392198_171414602_171414727_171433882
transcript_120433.known	chr2	-	9770	10	FSM	ENSG00000123600.21	ENST00000375258.9	9770	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_9	32.8986472009765	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTATAGTATAATTATGTT	-171432258	True	NA	NA	False	ATTAAA	-20	NA	171433990	171315745	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_171324363_171325840_171325907_171326041_171326149_171330558_171330699_171331803_171331868_171337452_171337503_171339183_171339555_171360421_171360514_171392042_171392198_171433882
transcript_120434.known	chr2	-	9791	10	FSM	ENSG00000123600.21	ENST00000612742.5	9791	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_9	35.1297418924776	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTATAGTATAATTATGTT	NA	False	NA	NA	False	ATTAAA	-20	NA	171434802	171315745	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_171324363_171325840_171325907_171326041_171326149_171330558_171330699_171331803_171331868_171337452_171337503_171339183_171339555_171360421_171360514_171392042_171392198_171434673
transcript_120435.nic	chr2	-	2301	10	NIC	ENSG00000123600.21	novel	2246	9	NA	NA	30	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_8	39.2082127955009	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-171432325	True	NA	NA	False	NA	NA	NA	171434057	171323250	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_171324363_171325840_171325907_171326041_171326149_171330558_171330699_171331803_171331868_171337452_171337503_171339183_171339555_171360421_171360514_171414602_171414727_171433882
transcript_120436.nic	chr2	-	2254	10	NIC	ENSG00000123600.21	novel	9791	10	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	18	junction_9	40.9980427114861	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	171434801	171323250	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_171324363_171325840_171325907_171326041_171326149_171330558_171330699_171331803_171331868_171337452_171337503_171339183_171339555_171360421_171360514_171414602_171414727_171434673
transcript_120444.nnic	chr2	-	2142	9	NIC	ENSG00000123600.21	novel	9770	10	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	1	6	junction_8	38.1590012316884	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-171432290	True	NA	NA	False	NA	NA	NA	171434022	171323250	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_171324363_171325840_171325907_171326041_171326149_171330558_171330699_171331803_171331868_171337452_171337503_171339183_171339555_171360421_171360514_171433882
transcript_120445.nic	chr2	-	2119	9	NIC	ENSG00000123600.21	novel	9791	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_8	35.6771548052812	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-171433738	True	NA	NA	False	NA	NA	NA	171434790	171323250	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_171324363_171325840_171325907_171326041_171326149_171330558_171330699_171331803_171331868_171337452_171337503_171339183_171339555_171360421_171360514_171434673
transcript_120464.known	chr2	-	558	5	FSM	ENSG00000123600.21	ENST00000453846.5	558	5	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_4	31.1558581971353	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTTGAGGGAATTTCC	-171433728	True	NA	NA	False	NA	NA	NA	171434780	171339474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_171339555_171360421_171360514_171392042_171392198_171414602_171414727_171434673
transcript_120468.known	chr2	-	697	4	FSM	ENSG00000123600.21	ENST00000463392.5	697	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	50.2858495669176	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAATTAAGTTAGTATTAT	-171326547	True	NA	13	True	NA	NA	NA	171327065	171323900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_171324363_171325840_171325907_171326041_171326149_171327003
transcript_120470.known	chr2	-	578	4	FSM	ENSG00000123600.21	ENST00000442778.5	578	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	33.4796787453059	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCATTATGAGAAAAGTTC	-171433728	True	NA	NA	False	NA	NA	NA	171434780	171339330	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_171339555_171360421_171360514_171392042_171392198_171434673
transcript_120483.known	chr2	+	5853	14	FSM	ENSG00000115827.14	ENST00000375255.8	5853	14	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_8	19.9428176627918	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTGTGAACATGTGTC	171431611	True	NA	26	True	AATAAA	-25	NA	171434225	171485052	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_171434704_171435082_171435187_171443522_171443614_171448680_171448818_171449878_171449958_171453123_171453214_171457970_171458076_171458371_171458478_171468887_171469031_171473865_171473976_171476859_171476951_171477986_171478071_171480037_171480194_171480973
transcript_120486.known	chr2	+	2429	13	FSM	ENSG00000115827.14	ENST00000468592.5	2429	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	32.9995791218952	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGGAGAAAATGTTTCTT	171431602	True	NA	NA	False	AATAAA	-13	NA	171434216	171482158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_171434271_171435082_171435187_171443522_171443614_171448680_171448818_171449878_171449958_171453123_171453214_171457970_171458076_171468887_171469031_171473865_171473976_171476859_171476951_171477986_171478071_171480037_171480194_171480973
transcript_120488.known	chr2	+	5623	12	FSM	ENSG00000115827.14	ENST00000539783.5	5623	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	35.0359909401322	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTCTTTTGTGAACATG	171431636	True	NA	22	True	AATAAA	-21	NA	171434250	171485048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_171434704_171435082_171435187_171443522_171443614_171448680_171448818_171449878_171449958_171453123_171453214_171457970_171458076_171458371_171458478_171468887_171469031_171477986_171478071_171480037_171480194_171480973
transcript_120499.known	chr2	-	447	1	FSM	ENSG00000233762.3	ENST00000433675.1	447	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTCAGCTAATAAAGGCG	-171517696	False	NA	-48	True	NA	NA	NA	171517716	171517269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_171517300_171517700
transcript_120500.known	chr2	+	4235	4	FSM	ENSG00000071967.12	ENST00000321348.9	4235	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	3.29983164553722	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTTGTGTGTTATCAAT	171521906	True	NA	NA	False	AATAAA	-14	NA	171522473	171558129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_171522739_171541584_171541794_171553345_171553501_171554523
transcript_120503.known	chr2	+	763	3	FSM	ENSG00000071967.12	ENST00000468308.1	763	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	13.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCGCCATGTTGCCCGGG	171522318	False	NA	NA	False	NA	NA	NA	171522347	171551140	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_171522739_171541584_171541794_171550977
transcript_120504.known	chr2	+	4354	18	FSM	ENSG00000077380.16	ENST00000397119.8	4354	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	290.68965841366	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTGGTATTATTTAAAC	171685610	True	NA	NA	False	AATAAA	-16	NA	171687468	171750158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_171687628_171690146_171690264_171692776_171692895_171706546_171706565_171707286_171707378_171712766_171712827_171715327_171715444_171725617_171725714_171725918_171726082_171726193_171726294_171726790_171726917_171727820_171727968_171728304_171728419_171728716_171728851_171729708_171729854_171744048_171744190_171745801_171745928_171747775
transcript_120505.known	chr2	+	2552	18	FSM	ENSG00000077380.16	ENST00000409453.5	2552	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	304.414862160996	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATTTTTACTCCTTAC	171682239	True	NA	14	True	AATAAA	-26	NA	171687775	171748420	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_171687874_171690146_171690264_171692776_171692895_171706546_171706565_171707286_171707378_171712766_171712827_171715327_171715444_171725617_171725714_171725918_171726082_171726193_171726294_171726790_171726917_171727820_171727968_171728304_171728419_171728716_171728851_171729708_171729854_171744048_171744190_171745801_171745928_171747778
transcript_120506.known	chr2	+	2494	16	FSM	ENSG00000077380.16	ENST00000508530.5	2494	16	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_15	183.891707262726	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCAAATTTTCATTTTT	171685642	False	NA	5	True	AATAAA	-17	NA	171687500	171748411	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_171687628_171690146_171690264_171692776_171692895_171707286_171707378_171715327_171715444_171725617_171725714_171725918_171726082_171726193_171726294_171726790_171726917_171727820_171727968_171728304_171728419_171728716_171728851_171729708_171729854_171744048_171744190_171745801_171745928_171747778
transcript_120508.known	chr2	+	2572	16	FSM	ENSG00000077380.16	ENST00000409197.5	2572	16	0	0	0	0	multi-exon	FALSE	canonical	3	509	junction_1	62.9538102279935	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCAAATTTTCATTTTT	171687602	False	NA	5	True	AATAAA	-17	NA	171687671	171748411	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_171687874_171690146_171690264_171692776_171692895_171707286_171707378_171715327_171715444_171725617_171725714_171725918_171726082_171726193_171726294_171726790_171726917_171727820_171727968_171728304_171728419_171728716_171728851_171729708_171729854_171744048_171744190_171745801_171745928_171747775
transcript_120513.known	chr2	+	2589	16	FSM	ENSG00000077380.16	ENST00000340296.8	2589	16	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_1	103.502656970727	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCAAATTTTCATTTTT	NA	False	NA	5	True	AATAAA	-17	NA	171687408	171748411	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_171687628_171690146_171690264_171692776_171692895_171707286_171707378_171715327_171715444_171725617_171725714_171725918_171726082_171726193_171726294_171726790_171726917_171727820_171727968_171728304_171728419_171728716_171728851_171729708_171729854_171744048_171744190_171745801_171745928_171747775
transcript_120514.nic	chr2	+	638	6	ISM	ENSG00000077380.16	ENST00000409197.5	2572	16	66	22734	-6	0	5prime_fragment	FALSE	canonical	3	509	junction_1	81.6122539818623	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTTTAAAGAAAGATGAG	171687579	True	NA	14	True	NA	NA	NA	171687737	171725677	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_171687874_171690146_171690264_171692776_171692895_171707286_171707378_171715327_171715444_171725617
transcript_120515.nic	chr2	+	564	5	ISM	ENSG00000077380.16	ENST00000409197.5	2572	16	76	32972	4	63	5prime_fragment	FALSE	canonical	3	509	junction_1	89.4968574867297	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTGAATATCTATCCTT	171682211	True	NA	NA	False	NA	NA	NA	171687747	171715439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_171687874_171690146_171690264_171692776_171692895_171707286_171707378_171715327
transcript_120516.known	chr2	+	581	3	FSM	ENSG00000077380.16	ENST00000471482.5	581	3	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_1	193	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGAGTAATTATTAACAT	171685613	True	NA	NA	False	NA	NA	NA	171687471	171693084	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_171687628_171690146_171690264_171692776
transcript_120518.nic	chr2	+	339	2	ISM	ENSG00000077380.16	ENST00000471482.5	581	3	-69	2824	-6	-2824	5prime_fragment	FALSE	canonical	3	321	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTATGTTTGATTTTTTT	NA	False	NA	48	True	AAGAAA	-12	NA	171687402	171690260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_171687628_171690146
transcript_120519.nic	chr2	+	255	2	ISM	ENSG00000077380.16	ENST00000411953.5	582	6	-21	25089	-10	-2823	5prime_fragment	FALSE	canonical	3	509	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTATGTTTGATTTTTTTG	171687575	True	NA	49	True	AAAAAG	-1	NA	171687733	171690261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_171687874_171690146
transcript_120525.known	chr2	-	3936	18	FSM	ENSG00000115840.14	ENST00000422440.7	3936	18	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_11	11.9988465420265	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATAGTATTTCATTGTAT	-171892782	True	NA	-8	True	TATAAA	-18	NA	171894244	171783404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_171785476_171787570_171787662_171787788_171787948_171791450_171791590_171793626_171793768_171809605_171809687_171810223_171810277_171813338_171813498_171815120_171815203_171826797_171826883_171833962_171834057_171834726_171834866_171837120_171837268_171844368_171844509_171855833_171855950_171868680_171868824_171893204_171893259_171894202
transcript_120533.known	chr2	+	1634	11	FSM	ENSG00000128708.13	ENST00000264108.5	1634	11	0	0	0	0	multi-exon	FALSE	canonical	3	557	junction_1	101.545260844611	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCCTTCCACACTTTGC	171911204	True	NA	12	True	AATAAA	-20	NA	171922460	171983686	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_171922508_171925536_171925642_171946707_171946784_171952880_171953002_171965337_171965518_171965786_171965909_171966408_171966514_171966842_171966950_171976156_171976309_171979246_171979364_171983184
transcript_120539.known	chr2	+	1567	10	FSM	ENSG00000128708.13	ENST00000412731.5	1567	10	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	263.039498512634	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATCATTCCTTCCACACT	171911191	True	NA	8	True	AATAAA	-16	NA	171922447	171983682	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_171922508_171925536_171925642_171952880_171953002_171965337_171965518_171965786_171965909_171966408_171966514_171966842_171966950_171976156_171976309_171979246_171979364_171983184
transcript_120543.known	chr2	+	3049	10	FSM	ENSG00000172878.14	ENST00000315796.5	3049	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	4.32049379893857	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGGGTGTATATATAT	171999176	True	NA	12	True	ATTAAA	-15	NA	171999952	172082430	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_172000010_172061497_172061656_172063710_172063861_172065603_172065753_172066263_172066307_172070906_172071071_172077796_172077895_172079214_172079263_172080127_172080207_172080327
transcript_120548.known	chr2	+	929	3	FSM	ENSG00000172878.14	ENST00000493035.5	929	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGAGACCAGCCTGGCCAA	171999166	True	NA	NA	False	NA	NA	NA	171999942	172064414	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_172000010_172061497_172061656_172063710
transcript_120553.known	chr2	+	5488	26	FSM	ENSG00000091409.16	ENST00000264107.12	5488	26	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_25	145.091728227353	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATCTATTTCATCAAAC	172418567	True	NA	7	True	TATAAA	-11	NA	172427667	172506258	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_172427971_172465538_172465664_172467480_172467561_172469124_172469381_172470973_172471106_172474054_172474266_172474928_172475123_172475596_172475686_172476394_172476514_172479640_172479740_172479989_172480052_172484781_172484943_172485120_172485265_172487022_172487139_172487263_172487454_172487546_172487631_172487727_172487808_172487960_172488039_172488125_172488229_172489484_172489614_172491023_172491123_172491220_172491332_172491424_172491524_172497974_172498101_172501771_172501902_172504090
transcript_120554.known	chr2	+	5816	26	FSM	ENSG00000091409.16	ENST00000684293.1	5816	26	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_25	123.557921640015	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGAGTTGTCTTTGGACT	172418485	True	NA	18	True	ATTAAA	-32	NA	172427585	172506459	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_172427971_172465538_172465664_172467480_172467561_172469124_172469381_172470973_172471106_172474054_172474266_172474928_172475123_172475596_172475686_172476394_172476514_172479640_172479740_172479989_172480052_172484781_172484943_172485120_172485265_172487022_172487139_172487263_172487454_172487546_172487631_172487727_172487808_172487960_172488039_172488125_172488229_172489484_172489659_172491023_172491123_172491220_172491332_172491424_172491524_172497974_172498101_172501771_172501902_172504090
transcript_120561.known	chr2	+	5686	25	FSM	ENSG00000091409.16	ENST00000409080.6	5686	25	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_9	41.6418050828198	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGAGTTGTCTTTGGACT	172418485	True	NA	18	True	ATTAAA	-32	NA	172427585	172506459	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_172427971_172465538_172465664_172467480_172467561_172469124_172469381_172470973_172471106_172474054_172474266_172474928_172475123_172475596_172475686_172476394_172476514_172479640_172479740_172479989_172480052_172484781_172484943_172485120_172485265_172487022_172487139_172487263_172487454_172487546_172487631_172487727_172487808_172487960_172488039_172488125_172488229_172489484_172489659_172491023_172491123_172491220_172491332_172491424_172491524_172497974_172498101_172504090
transcript_120571.nic	chr2	+	2979	21	ISM	ENSG00000091409.16	ENST00000684293.1	5816	26	-73	15412	-73	-207	5prime_fragment	FALSE	canonical	3	409	junction_9	35.3208153926265	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGGGAAATTACTGAAAAACA	172427476	False	NA	NA	False	AAGAAA	-5	NA	172427512	172491047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_172427971_172465538_172465664_172467480_172467561_172469124_172469381_172470973_172471106_172474054_172474266_172474928_172475123_172475596_172475686_172476394_172476514_172479640_172479740_172479989_172480052_172484781_172484943_172485120_172485265_172487022_172487139_172487263_172487454_172487546_172487631_172487727_172487808_172487960_172488039_172488125_172488229_172489484_172489659_172491023
transcript_120572.nic	chr2	+	3042	21	ISM	ENSG00000091409.16	ENST00000684293.1	5816	26	-73	15349	-73	-144	5prime_fragment	FALSE	canonical	3	409	junction_9	35.3208153926265	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCAGACTCTTGTAAGTAT	172427476	False	NA	NA	False	AAGAAA	-2	NA	172427512	172491110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_172427971_172465538_172465664_172467480_172467561_172469124_172469381_172470973_172471106_172474054_172474266_172474928_172475123_172475596_172475686_172476394_172476514_172479640_172479740_172479989_172480052_172484781_172484943_172485120_172485265_172487022_172487139_172487263_172487454_172487546_172487631_172487727_172487808_172487960_172488039_172488125_172488229_172489484_172489659_172491023
transcript_120575.nic	chr2	+	2956	20	ISM	ENSG00000091409.16	ENST00000264107.12	5488	26	-155	16599	-73	-269	5prime_fragment	FALSE	canonical	3	409	junction_9	34.25794284833	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTCGGTAGATTTATCTA	172427476	False	NA	NA	False	GATAAA	-18	NA	172427512	172489659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_172427971_172465538_172465664_172467480_172467561_172469124_172469381_172470973_172471106_172474054_172474266_172474928_172475123_172475596_172475686_172476394_172476514_172479640_172479740_172479989_172480052_172484781_172484943_172485120_172485265_172487022_172487139_172487263_172487454_172487546_172487631_172487727_172487808_172487960_172488039_172488125_172488229_172489484
transcript_120586.nic	chr2	+	1808	12	ISM	ENSG00000091409.16	ENST00000264107.12	5488	26	-97	21436	-15	-5106	5prime_fragment	FALSE	canonical	3	409	junction_9	37.8472353434236	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGGCTATCCTCAAGAGT	172418470	True	NA	NA	False	AAAAAG	-12	NA	172427570	172484822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_172427971_172465538_172465664_172467480_172467561_172469124_172469381_172470973_172471106_172474054_172474266_172474928_172475123_172475596_172475686_172476394_172476514_172479640_172479740_172479989_172480052_172484781
transcript_120587.known	chr2	+	1515	12	FSM	ENSG00000152256.14	ENST00000392571.6	1515	12	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	57.2237886151474	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACACTTGGGACATCGGAA	172553111	True	NA	NA	False	NA	NA	NA	172556006	172595969	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_172556347_172558707_172558850_172562219_172562292_172562740_172562801_172564502_172564688_172564977_172565074_172566855_172566934_172568740_172568818_172570725_172570825_172586277_172586389_172592934_172593049_172595828
transcript_120592.known	chr2	+	2990	12	FSM	ENSG00000152256.14	ENST00000410055.5	2990	12	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_11	40.6492759635844	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCCACAGTATAACTGTA	172553155	True	NA	NA	False	AATAAA	-17	NA	172556050	172599137	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_172556347_172558707_172558850_172562219_172562292_172564502_172564688_172564977_172565074_172566855_172566934_172568740_172568818_172570725_172570825_172586277_172586389_172592934_172593049_172595828_172596024_172597612
transcript_120596.known	chr2	+	14072	11	FSM	ENSG00000152256.14	ENST00000282077.8	14072	11	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_6	27.9751675598199	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATGTCACTCATTTTTG	172553194	True	NA	8	True	ATTAAA	-21	NA	172556089	172608669	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_172556347_172558707_172558850_172562219_172562292_172564502_172564688_172564977_172565074_172566855_172566934_172568740_172568818_172570725_172570825_172586277_172586389_172592934_172593049_172595828
transcript_120605.nnic	chr2	+	2077	7	NNC	ENSG00000152256.14	novel	14072	11	NA	NA	-13	-2462	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_6	65.9646369908403	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAAGAATGTATGCA	172553098	True	NA	NA	False	NA	NA	NA	172555993	172568350	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_172556347_172558707_172558850_172562219_172562292_172564502_172564688_172564977_172565074_172566855_172566934_172567199
transcript_120610.nnic	chr2	-	1414	5	NNC	ENSG00000225205.5	novel	950	4	NA	NA	49	-10232	intron_retention	FALSE	canonical	2	12	junction_3	33.9954041011428	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTTTTTCAGTAATTT	-172555297	True	NA	-1	True	AATAAA	-21	NA	172556480	172491071	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_172491672_172495374_172495517_172496131_172496227_172512333_172512519_172556088
transcript_120612.nnic	chr2	-	1395	4	NNC	ENSG00000225205.5	novel	950	4	NA	NA	-27	-10232	intron_retention	FALSE	canonical	2	18	junction_1	33.5360502544153	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTTTTTCAGTAATTT	NA	False	NA	-1	True	AATAAA	-21	NA	172556556	172491071	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_172491672_172495374_172495517_172512333_172512519_172556088
transcript_120616.known	chr2	-	1397	3	FSM	ENSG00000225205.5	ENST00000450443.1	1397	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	9	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAGAAGTGCATCACTAC	NA	False	NA	-87	True	AATAAA	-20	NA	172556596	172503438	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_172504143_172512333_172512519_172556088
transcript_120623.known	chr2	+	4301	31	FSM	ENSG00000091428.18	ENST00000397081.8	4301	31	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_26	3.86379203489123	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTGTTCATCTCAATT	172735771	True	NA	NA	False	AATATA	-16	NA	172735844	173052893	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_172736049_172795024_172795168_172797524_172797614_172814278_172814426_172917801_172917875_172922280_172922301_172960759_172960814_172961121_172961229_172965561_172965684_172967260_172967445_172983495_172983581_172985432_172985494_172988195_172988273_172988692_172988840_172990809_172990926_172996465_172996555_173001265_173001345_173014463_173014615_173016348_173016438_173017173_173017205_173017425_173017505_173018655_173018803_173020617_173020716_173026571_173026698_173027080_173027260_173030163_173030255_173033913_173033965_173036124_173036213_173036627_173036693_173048599_173048655_173051639
transcript_120627.known	chr2	+	3859	20	FSM	ENSG00000091436.17	ENST00000375213.8	3859	20	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_18	19.4621587515028	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGTTCAGCATTCACT	173074751	True	NA	11	True	AATAAA	-21	NA	173075845	173268015	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_173076003_173090997_173091191_173169804_173169893_173182853_173182956_173187557_173187624_173190894_173190924_173191039_173191178_173198025_173198113_173203795_173203871_173209728_173209836_173217114_173217251_173229688_173229734_173232191_173232223_173232319_173232460_173238372_173238436_173239403_173239497_173258698_173258816_173261062_173261138_173263744_173263896_173266049
transcript_120628.known	chr2	+	2572	20	FSM	ENSG00000091436.17	ENST00000409176.6	2572	20	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	21.2017090201229	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	173075668	False	NA	NA	False	NA	NA	NA	173075713	173266783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_173075816_173090997_173091191_173169804_173169893_173182853_173182956_173187557_173187624_173190894_173190924_173191039_173191178_173198025_173198113_173203795_173203871_173209728_173209836_173217114_173217251_173229688_173229734_173232191_173232223_173232319_173232460_173238372_173238436_173239403_173239497_173258698_173258816_173261062_173261138_173263744_173263896_173266049
transcript_120629.known	chr2	+	7179	12	FSM	ENSG00000091436.17	ENST00000338983.7	7179	12	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_11	11.6150372754069	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTTGTTACGTGTTGCT	173074747	True	NA	NA	False	AATAAA	-16	NA	173075841	173227146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_173076003_173090997_173091191_173169804_173169893_173182853_173182956_173187557_173187624_173190894_173190924_173191039_173191178_173198025_173198113_173203795_173203871_173209728_173209836_173217114_173217251_173221149
transcript_120633.known	chr2	+	2312	12	FSM	ENSG00000091436.17	ENST00000539448.5	2312	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	20.3205713461682	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAACAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	173075434	173222204	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_173075671_173090997_173091191_173169804_173169893_173182853_173182956_173187557_173187624_173190894_173190924_173191039_173191178_173198025_173198113_173203795_173203871_173209728_173209836_173217114_173217251_173221149
transcript_120640.known	chr2	+	2778	10	FSM	ENSG00000144354.14	ENST00000306721.8	2778	10	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_2	206.044463618061	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCCTTTTGACTGAAGT	173341429	True	NA	21	True	AATAAA	-27	NA	173354871	173368997	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_173354985_173358711_173358838_173359254_173359492_173363225_173363463_173363817_173363896_173364794_173364990_173365451_173365593_173366282_173366433_173367149_173367287_173367633
transcript_120646.known	chr2	+	1369	10	FSM	ENSG00000144354.14	ENST00000410101.7	1369	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	254.751779455615	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATTTTTTCACTGAAACC	173341429	True	NA	NA	False	NA	NA	NA	173354871	173367720	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_173354985_173358711_173358838_173359386_173359492_173363225_173363463_173363817_173363896_173364794_173364990_173365451_173365593_173366282_173366433_173367149_173367287_173367633
transcript_120663.known	chr2	+	2500	9	FSM	ENSG00000144354.14	ENST00000347703.7	2500	9	0	0	0	0	multi-exon	FALSE	canonical	3	539	junction_2	83.8330744694479	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTCTGCTTTTTTAAAAA	173341377	True	NA	15	True	AATAAA	-14	NA	173354819	173368904	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_173354985_173358711_173358838_173363225_173363463_173363817_173363896_173364794_173364990_173365451_173365593_173366282_173366433_173367149_173367287_173367633
transcript_120675.known	chr2	+	2943	8	FSM	ENSG00000144354.14	ENST00000496441.5	2943	8	0	0	0	0	multi-exon	FALSE	canonical	3	539	junction_2	76.4804897089607	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTTGATATTAAAAACTA	173341429	True	NA	1	True	AATAAA	-22	NA	173354871	173368500	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_173354985_173358711_173358838_173363225_173363463_173363817_173364990_173365451_173365593_173366282_173366433_173367149_173367287_173367633
transcript_120685.nic	chr2	+	1303	5	NIC	ENSG00000144354.14	novel	928	7	NA	NA	-11	-188	combination_of_known_junctions	FALSE	canonical	3	76	junction_4	271.729990063666	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGCTCTCTTTACTTAAA	173341366	True	NA	NA	False	AAAAAG	-7	NA	173354808	173364685	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_173354985_173358711_173358838_173363225_173363463_173363817_173363896_173363999
transcript_120693.known	chr2	-	11714	7	FSM	ENSG00000172845.18	ENST00000310015.12	11714	7	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_6	117.149002935957	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTACACATCCTTTATTG	-173963641	True	NA	-3	True	AATAAA	-19	NA	173965373	173900774	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_173910258_173913069_173913267_173918592_173918786_173954872_173956233_173963760_173963884_173964404_173964554_173965164
transcript_120696.known	chr2	-	3937	5	FSM	ENSG00000172845.18	ENST00000418194.7	3937	5	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_4	42.5580485924813	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTGTATTCCTATGCA	-173963940	False	1732	0	True	AATAAA	-23	NA	173964219	173908529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_173910258_173913069_173913267_173918592_173918786_173954872_173956233_173963760
transcript_120704.known	chr2	-	4251	11	FSM	ENSG00000138430.16	ENST00000284719.8	4251	11	0	0	0	0	multi-exon	FALSE	canonical	3	648	junction_10	32.7145227689477	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGAGTGACTTTTTTGT	-174238914	True	NA	-10	True	AATAAA	-15	NA	174248532	174072446	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_174075528_174078967_174079091_174081151_174081249_174081923_174082065_174123179_174123278_174123594_174123676_174141824_174142001_174223032_174223161_174229307_174229452_174246714_174246816_174248451
transcript_120707.known	chr2	-	1656	10	FSM	ENSG00000138430.16	ENST00000344357.9	1656	10	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_9	203.367453117883	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGGTGTGTTTGGGGA	-174238981	True	NA	-4	True	AATAAA	-16	NA	174248599	174075007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_174075528_174078967_174079091_174081151_174081249_174081923_174082065_174123179_174123278_174123594_174123676_174141824_174142001_174223032_174223161_174229307_174229452_174248451
transcript_120709.nic	chr2	-	1267	10	ISM	ENSG00000138430.16	ENST00000284719.8	4251	11	-133	6557	-66	1904	5prime_fragment	FALSE	canonical	3	648	junction_9	30.7177513323091	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTTAAAGAGGAAGGTTC	NA	False	NA	-6	True	AATGAA	-8	NA	174248665	174079003	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_174079091_174081151_174081249_174081923_174082065_174123179_174123278_174123594_174123676_174141824_174142001_174223032_174223161_174229307_174229452_174246714_174246816_174248451
transcript_120712.nic	chr2	-	884	7	ISM	ENSG00000138430.16	ENST00000428402.6	1270	8	-134	48172	-10	-41172	5prime_fragment	FALSE	canonical	3	648	junction_6	35.2723530387312	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTAAGTTTTTCCTCACCA	-174238991	True	NA	NA	False	AAAAAG	-24	NA	174248609	174123181	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_174123278_174123594_174123676_174141824_174142001_174223032_174223161_174229307_174229452_174246714_174246816_174248451
transcript_120717.known	chr2	+	3123	3	FSM	ENSG00000231453.1	ENST00000420866.1	3123	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGGAGAGTTCCTCAAT	NA	False	NA	NA	False	ATTAAA	-18	NA	174326026	174330643	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_174327411_174328456_174328837_174329284
transcript_120718.known	chr2	-	1918	10	FSM	ENSG00000138433.16	ENST00000342016.8	1918	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	66.8831669756401	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCCTTTAGGTGTTTTGT	-174393477	True	NA	NA	False	AATAAA	-17	NA	174395712	174348021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_174349173_174350659_174350746_174351618_174351726_174378922_174379041_174380201_174380251_174380650_174380716_174380803_174380815_174381703_174381778_174387684_174387780_174395550
transcript_120724.known	chr2	+	3052	8	FSM	ENSG00000144306.15	ENST00000272732.11	3052	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	19.2162771140106	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCACCAGAATGGTACATT	174395537	True	NA	NA	False	NA	NA	NA	174395729	174429575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_174395818_174398274_174398443_174399921_174400104_174400989_174401190_174404102_174404316_174422884_174423048_174424474_174424650_174427712
transcript_120727.known	chr2	+	943	4	FSM	ENSG00000144306.15	ENST00000549848.5	943	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	8.04155872120988	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCATATGGTCAGCTAAT	174409714	True	NA	NA	False	NA	NA	NA	174410081	174427895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_174410504_174422884_174423048_174424474_174424650_174427712
transcript_120729.known	chr2	+	658	3	FSM	ENSG00000144306.15	ENST00000475928.1	658	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	23.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACTATTAAACTACGTATA	174410323	False	NA	NA	False	NA	NA	NA	174410343	174428035	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_174410504_174424474_174424650_174427712
transcript_12073.known	chr1	+	3383	20	FSM	ENSG00000155363.19	ENST00000357443.2	3383	20	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	58.2238968179288	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAAACAAAATCTTGTTC	112671994	True	NA	-5	True	AAGAAA	-4	NA	112674744	112700710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_112675050_112688934_112689139_112689414_112689651_112689839_112690099_112691664_112691800_112692760_112692930_112694017_112694173_112694452_112694630_112694748_112694897_112695415_112695575_112696147_112696252_112696436_112696535_112696629_112696847_112697993_112698112_112698286_112698479_112698714_112698790_112699684_112699811_112699893_112699983_112700218_112700341_112700415
transcript_120731.known	chr2	+	393	2	FSM	ENSG00000226853.4	ENST00000417038.1	393	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGTCCCAGTGTATTA	174487362	True	NA	NA	False	ATTAAA	-19	NA	174487402	174488300	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_174487530_174488034
transcript_120732.known	chr2	-	2003	8	FSM	ENSG00000115935.18	ENST00000359761.7	2003	8	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_7	3.01695886884898	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAAAGTCCCTGAGAGCT	-174682483	True	NA	-43	True	NA	NA	NA	174682883	174562203	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_174562603_174567069_174567184_174567860_174568074_174571675_174572447_174575203_174575381_174581309_174581440_174585522_174585612_174682773
transcript_120736.known	chr2	-	553	3	FSM	ENSG00000115935.18	ENST00000487291.1	553	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-174682516	True	NA	NA	False	NA	NA	NA	174682916	174676336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_174676667_174677044_174677125_174682773
transcript_120742.nic	chr2	-	2436	15	NIC	ENSG00000128656.15	novel	3156	13	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_11	51.8238775634773	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACAGCATTTTCTGTTAA	-175003809	True	NA	-17	True	AATAAA	-28	NA	175005398	174799499	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174824433_174824519_174846879_174846958_174877839_174878129_174915057_174915172_174918533_174918566_174940815_174940895_174944887_174944944_174952163_174952203_175004893_175005081_175005205
transcript_120746.nic	chr2	-	2494	14	NIC	ENSG00000128656.15	novel	3156	13	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_7	33.7219749960339	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGATAGCTTACTTTTTT	-175003841	True	NA	-38	True	AATAAA	-4	NA	175005430	174799394	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174824433_174824519_174846879_174846958_174877839_174878129_174915057_174915172_174918533_174918566_174944887_174944944_174952163_174952203_175004893_175005081_175005205
transcript_120754.nic	chr2	-	2486	14	NIC	ENSG00000128656.15	novel	3156	13	NA	NA	-146	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_7	33.7219749960339	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACAGCATTTTCTGTTAA	NA	False	NA	-17	True	AATAAA	-28	NA	175005527	174799499	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174824433_174824519_174846879_174846958_174877839_174878129_174915057_174915172_174918533_174918566_174944887_174944944_174952163_174952203_175004893_175005081_175005205
transcript_120758.known	chr2	-	1761	13	FSM	ENSG00000128656.15	ENST00000409156.7	1761	13	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	48.7347554512064	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTTTCTGTTGTTTTTGT	-175003780	True	NA	NA	False	ATTAAA	-7	NA	175005369	174799988	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174824433_174824519_174877839_174878129_174915057_174915172_174918533_174918566_174944887_174944944_174952163_174952203_175004893_175005081_175005205
transcript_120763.known	chr2	-	1852	12	FSM	ENSG00000128656.15	ENST00000651501.1	1852	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_11	62.7308299386624	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATTTTCTGTTAAATTAT	-175003775	True	NA	-12	True	AATAAA	-33	NA	175005364	174799494	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174824433_174824519_174846879_174846958_174915057_174915172_174918533_174918566_174944887_174944944_174952163_174952203_175005205
transcript_120767.known	chr2	-	1719	8	FSM	ENSG00000128656.15	ENST00000650731.1	1719	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	60.8661965096475	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGTGTACAACACAGC	-174847343	True	NA	-29	True	AATAAA	-16	NA	174847596	174799511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174824433_174824519_174846879_174846958_174847312
transcript_120771.known	chr2	-	959	9	FSM	ENSG00000128656.15	ENST00000650770.1	959	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_6	47.8748368143433	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAATACTGTGCCAACTTT	-175005122	False	NA	NA	False	NA	NA	NA	175005137	174824490	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_174824519_174846879_174846958_174877839_174878129_174915057_174915172_174918533_174918566_174940815_174940895_174944887_174944944_174952163_174952203_175004893
transcript_120773.known	chr2	-	1919	15	FSM	ENSG00000115966.18	ENST00000392544.5	1919	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_13	62.6780321507122	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTACTTGAAATTA	-175163948	True	NA	NA	False	NA	NA	NA	175168169	175074504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_175074836_175080659_175080766_175093060_175093268_175097443_175097594_175111567_175111655_175113993_175114109_175114689_175114869_175117989_175118119_175118250_175118370_175121443_175121541_175130137_175130208_175136411_175136487_175147945_175147981_175151059_175151159_175168049
transcript_120774.known	chr2	-	1861	14	FSM	ENSG00000115966.18	ENST00000456655.5	1861	14	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	59.8236065890836	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTACTTGAAATTA	-175163948	True	NA	NA	False	NA	NA	NA	175168169	175074504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_175074836_175080659_175080766_175092542_175092617_175093060_175093268_175097443_175097594_175111567_175111655_175113993_175114109_175114689_175114869_175117989_175118119_175118250_175118370_175130137_175130208_175136411_175136487_175151059_175151159_175168049
transcript_120775.known	chr2	-	4164	14	FSM	ENSG00000115966.18	ENST00000264110.7	4164	14	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_9	30.8374244313972	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCATAATTTGCTTGTTC	-175163982	True	NA	-9	True	AATAAA	-17	NA	175168203	175072258	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_175074836_175080659_175080766_175093060_175093268_175097443_175097594_175111567_175111655_175113993_175114109_175114689_175114869_175117989_175118119_175118250_175118370_175121443_175121541_175130137_175130208_175136411_175136487_175151059_175151159_175168049
transcript_120779.known	chr2	-	4079	13	FSM	ENSG00000115966.18	ENST00000345739.9	4079	13	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_9	29.8369411226345	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTGTTCTCTTACCTT	-175163985	True	NA	0	True	AATAAA	-26	NA	175168206	175072249	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_175074836_175080659_175080766_175093060_175093268_175097443_175097594_175111567_175111655_175113993_175114109_175114689_175114869_175117989_175118119_175118250_175118370_175130137_175130208_175136411_175136487_175151059_175151159_175168049
transcript_120789.known	chr2	-	795	5	FSM	ENSG00000154518.10	ENST00000409194.5	795	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	1565.81081232696	929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGAGGAAGCTACAGCAG	-175152054	True	NA	65	True	NA	NA	NA	175181710	175178066	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_175178403_175179056_175179251_175180097_175180179_175181354_175181484_175181655
transcript_120792.known	chr2	-	842	4	FSM	ENSG00000154518.10	ENST00000392541.3	842	4	0	0	0	0	multi-exon	FALSE	canonical	3	3437	junction_1	130.410463111243	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTCTGTGATTTGTAC	-175152007	True	NA	-13	True	ATTAAA	-14	NA	175181663	175178144	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_175178403_175179056_175179251_175180097_175180179_175181354
transcript_120793.known	chr2	-	1313	4	FSM	ENSG00000154518.10	ENST00000497075.5	1313	4	0	0	0	0	multi-exon	FALSE	canonical	3	2757	junction_3	450.582585844889	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTTATTTCCAAAGTCATT	-175152054	True	NA	-54	True	NA	NA	NA	175181710	175178185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_175179251_175180097_175180179_175181354_175181467_175181655
transcript_120795.known	chr2	-	7542	13	FSM	ENSG00000144320.14	ENST00000272748.9	7542	13	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	7.81158327954924	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATTTTATCACTCCATA	-176000463	True	NA	-24	True	AATAAA	-26	NA	176002267	175923881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_175930200_175937343_175937515_175938312_175938384_175939551_175939658_175947479_175947693_175964371_175964424_175964505_175964590_175970763_175970805_175979809_175979869_175992230_175992419_175993181_175993224_175995557_175995647_176002159
transcript_120802.known	chr2	-	345	1	FSM	ENSG00000218175.2	ENST00000405359.2	345	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTTTTATAACGTGTTC	NA	False	NA	-50	True	NA	NA	NA	176201252	176200907	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_176200900_176201300
transcript_120804.known	chr2	+	1592	11	FSM	ENSG00000128654.14	ENST00000420864.5	1592	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	258.032943633173	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTTGTGTTACATACTC	NA	False	NA	12	True	AATAAA	-21	NA	176269394	176338025	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_176269670_176270215_176270420_176296859_176296908_176297848_176297896_176323391_176323465_176326824_176326902_176328292_176328386_176328873_176328913_176329300_176329427_176330583_176330661_176337492
transcript_120806.known	chr2	+	1341	10	FSM	ENSG00000128654.14	ENST00000249442.11	1341	10	0	0	0	0	multi-exon	FALSE	canonical	3	627	junction_2	36.6757564490647	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTTGTGTTACATACTC	176261732	True	NA	12	True	AATAAA	-21	NA	176269441	176338025	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_176269670_176296859_176296908_176297848_176297896_176323391_176323465_176326824_176326902_176328292_176328386_176328873_176328913_176329300_176329427_176330583_176330661_176337492
transcript_120808.known	chr2	+	817	10	FSM	ENSG00000128654.14	ENST00000452865.1	817	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	215.046133436928	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGAAGATCGTGGTAAAG	176261792	True	NA	NA	False	NA	NA	NA	176269501	176337630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_176269670_176296859_176296908_176297848_176297896_176323391_176323465_176326824_176326902_176328292_176328386_176328873_176328913_176329369_176329427_176330583_176330661_176337492
transcript_120813.known	chr2	+	799	7	FSM	ENSG00000128654.14	ENST00000443241.5	799	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	259.945346819929	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGAGTCTTAACTTTTGA	176261760	True	NA	NA	False	NA	NA	NA	176269469	176337679	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_176269670_176326824_176326902_176328292_176328386_176328873_176328913_176329300_176329427_176330583_176330661_176337492
transcript_120814.known	chr2	+	5688	11	FSM	ENSG00000170144.21	ENST00000411529.6	5688	11	0	0	0	0	multi-exon	FALSE	canonical	3	610	junction_1	934.375304682225	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGCCTTTATCAGTTAT	177142971	True	NA	6	True	AATAAA	-17	NA	177212748	177223958	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_177212806_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177219407
transcript_120816.known	chr2	+	2067	11	FSM	ENSG00000170144.21	ENST00000392524.6	2067	11	0	0	0	0	multi-exon	FALSE	canonical	3	2351	junction_1	491.754857627253	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGCATTAAGATTACCTT	177212511	True	NA	-18	True	GATAAA	-36	NA	177212562	177220085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_177212872_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177219407
transcript_120818.known	chr2	+	3111	11	FSM	ENSG00000170144.21	ENST00000678111.1	3111	11	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_10	1045.04727644255	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACAGGAAACTTGGAGTG	177142946	True	NA	-10	True	AATAAA	-1	NA	177212723	177223942	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_177212872_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177222059
transcript_120823.known	chr2	+	5600	10	FSM	ENSG00000170144.21	ENST00000676681.1	5600	10	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_7	1070.8133749401	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTACCAGTAAGTAATA	177142946	True	NA	-32	True	NA	NA	NA	177212723	177223920	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_177212872_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177219036_177219160_177219246_177219315_177219407
transcript_120825.known	chr2	+	5829	10	FSM	ENSG00000170144.21	ENST00000678421.1	5829	10	0	0	0	0	multi-exon	FALSE	canonical	3	2351	junction_1	502.203588641543	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTACCAGTAAGTAATA	177142946	True	NA	-32	True	NA	NA	NA	177212723	177223920	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_177212872_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177219407
transcript_120834.nic	chr2	+	488	4	ISM	ENSG00000170144.21	ENST00000677508.1	5953	10	-17	7788	2	-3555	5prime_fragment	FALSE	canonical	3	610	junction_1	1297.76328949295	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGGATTTGCTTTTGTAA	177142965	True	NA	NA	False	NA	NA	NA	177212742	177216132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_177212806_177215538_177215662_177215749_177215897_177215977
transcript_120836.known	chr2	+	1911	11	FSM	ENSG00000170144.21	ENST00000679328.1	1911	11	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	1074.22951458243	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGCATTAAGATTACCTT	177212707	True	NA	-18	True	GATAAA	-36	NA	177213265	177220085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_177213419_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177219407
transcript_120838.known	chr2	-	2651	5	FSM	ENSG00000116044.16	ENST00000397063.8	2651	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	97.3049330712477	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTGGGATTCCTTTGA	-177263778	False	NA	-2	True	AATAAA	-24	NA	177263800	177230304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_177232009_177232391_177232584_177233249_177233340_177234004_177234272_177263402
transcript_120839.known	chr2	-	2446	5	FSM	ENSG00000116044.16	ENST00000397062.8	2446	5	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_1	21.2529409729571	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTTTGGGATTCCTT	-177261780	True	NA	-5	True	AATAAA	-21	NA	177264727	177230307	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_177232009_177232391_177232584_177233249_177233340_177234004_177234272_177264531
transcript_120844.known	chr2	+	7633	20	FSM	ENSG00000018510.18	ENST00000264167.11	7633	20	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_12	46.0883771048095	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATTGTTATAGAAATTGT	177386198	True	NA	12	True	AATAAA	-16	NA	177392772	177543834	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_177393050_177420268_177420359_177434326_177434418_177436763_177436885_177436979_177437055_177440964_177441037_177442406_177442487_177445545_177445627_177461892_177462019_177468415_177468525_177482058_177482187_177493147_177493200_177497688_177497766_177499617_177499731_177505505_177505576_177507969_177508032_177513818_177513909_177521268_177521369_177523747_177523806_177538073
transcript_120846.known	chr2	+	8603	20	FSM	ENSG00000018510.18	ENST00000679421.1	8603	20	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	97.1705243544775	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCTAAAAGGGGATATGCA	177386185	True	NA	NA	False	NA	NA	NA	177392759	177543592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_177393050_177420268_177420359_177434326_177434418_177436763_177436885_177436979_177437055_177440964_177442236_177442406_177442487_177445545_177445627_177461892_177462019_177468415_177468525_177482058_177482187_177493147_177493200_177497688_177497766_177499617_177499731_177505505_177505576_177507969_177508032_177513818_177513909_177521268_177521369_177523747_177523806_177538073
transcript_120849.known	chr2	+	2103	20	FSM	ENSG00000018510.18	ENST00000679459.1	2103	20	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_19	98.4463800791706	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCATGATCCACCCACGTT	177386171	True	NA	NA	False	NA	NA	NA	177392745	177567024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_177393050_177420268_177420359_177434326_177434418_177436763_177436885_177436979_177437055_177440964_177441037_177442406_177442487_177445545_177445627_177461892_177462019_177468415_177468525_177482058_177482187_177493147_177493200_177497688_177497766_177499617_177499731_177505505_177505576_177507969_177508032_177513818_177513909_177521268_177521369_177523747_177523806_177566820
transcript_120850.known	chr2	-	3799	1	FSM	ENSG00000196659.10	ENST00000408939.4	3799	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACACTATTTTCTTTAGGG	-177552525	True	NA	3	True	ATTAAA	-31	NA	177552796	177548997	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_177549000_177552800
transcript_120852.known	chr2	+	1788	10	FSM	ENSG00000155636.15	ENST00000616198.4	1788	10	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	35.6644166822332	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCATGACTTATTTATGT	178111337	True	NA	NA	False	AATAAA	-18	NA	178112454	178129653	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_178112847_178116261_178116385_178118054_178118182_178120286_178120410_178121173_178121360_178123521_178123652_178123827_178123913_178124126_178124291_178125983_178126185_178129396
transcript_120860.known	chr2	+	3637	26	FSM	ENSG00000079156.17	ENST00000392505.6	3637	26	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_11	13.3148939162128	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	178194011	True	NA	NA	False	NA	NA	NA	178194480	178395772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_178194675_178284926_178285122_178306029_178306287_178324176_178324270_178328255_178328379_178331551_178331606_178332640_178332755_178332870_178333042_178336300_178336434_178338990_178339095_178339671_178339765_178344285_178344361_178349223_178349390_178361681_178361816_178372125_178372234_178373889_178374028_178382419_178382508_178383023_178383278_178384038_178384177_178385457_178385522_178387060_178387140_178389008_178389154_178391072_178391218_178392411_178392539_178394312_178394436_178395450
transcript_120866.known	chr2	+	10652	25	FSM	ENSG00000079156.17	ENST00000190611.9	10652	25	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	7.69187432005721	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGAGATTTTTTTGTGTA	178194042	True	NA	NA	False	AATAAA	-17	NA	178194511	178402893	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_178194675_178284926_178285122_178306029_178306287_178324176_178324270_178328255_178328379_178331551_178331606_178332640_178332755_178332870_178333042_178336300_178336434_178338990_178339095_178339671_178339765_178349223_178349390_178361681_178361816_178372125_178372234_178373889_178374028_178382419_178382508_178383023_178383278_178384038_178384177_178385457_178385522_178387060_178387140_178389008_178389154_178391072_178391218_178392411_178392539_178394312_178394436_178395450
transcript_120872.known	chr2	+	7114	24	FSM	ENSG00000079156.17	ENST00000359685.7	7114	24	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_13	11.0422799760712	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATTTGTTATTGAATTG	178194011	True	NA	NA	False	AATACA	-14	NA	178194480	178399432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_178194675_178284926_178285122_178306029_178306287_178324176_178324270_178328255_178328379_178331551_178331606_178332640_178332755_178332870_178333042_178336300_178336434_178338990_178339095_178339671_178339765_178349223_178349390_178361681_178361816_178373889_178374028_178382419_178382508_178383023_178383278_178384038_178384177_178385457_178385522_178387060_178387140_178389008_178389154_178391072_178391218_178392411_178392539_178394312_178394436_178395450
transcript_120873.known	chr2	+	3427	24	FSM	ENSG00000079156.17	ENST00000409045.7	3427	24	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_10	11.0229182115228	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	178194053	True	NA	NA	False	NA	NA	NA	178194522	178395772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_178194675_178284926_178285122_178306029_178306287_178324176_178324270_178328255_178328379_178331551_178331606_178332640_178332755_178332870_178333042_178336300_178336434_178338990_178339095_178349223_178349390_178361681_178361816_178372125_178372234_178373889_178374028_178382419_178382508_178383023_178383278_178384038_178384177_178385457_178385522_178387060_178387140_178389008_178389154_178391072_178391218_178392411_178392539_178394312_178394436_178395450
transcript_120874.nnic	chr2	+	3351	24	NIC	ENSG00000079156.17	novel	10652	25	NA	NA	-33	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_3	10.2139679741488	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTCTTATAGCTATGTG	178193978	True	NA	6	True	AATAAA	-16	NA	178194447	178395621	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_178194675_178284926_178285122_178306029_178306287_178328255_178328379_178331551_178331606_178332640_178332755_178332870_178333042_178336300_178336434_178338990_178339095_178339671_178339765_178349223_178349390_178361681_178361816_178372125_178372234_178373889_178374028_178382419_178382508_178383023_178383278_178384038_178384177_178385457_178385522_178387060_178387140_178389008_178389154_178391072_178391218_178392411_178392539_178394312_178394436_178395450
transcript_120875.nnic	chr2	+	3515	24	NIC	ENSG00000079156.17	novel	10652	25	NA	NA	-33	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_3	10.2139679741488	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATCCAC	178193978	True	NA	NA	False	NA	NA	NA	178194447	178395785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_178194675_178284926_178285122_178306029_178306287_178328255_178328379_178331551_178331606_178332640_178332755_178332870_178333042_178336300_178336434_178338990_178339095_178339671_178339765_178349223_178349390_178361681_178361816_178372125_178372234_178373889_178374028_178382419_178382508_178383023_178383278_178384038_178384177_178385457_178385522_178387060_178387140_178389008_178389154_178391072_178391218_178392411_178392539_178394312_178394436_178395450
transcript_120880.known	chr2	-	1885	9	FSM	ENSG00000180228.14	ENST00000677584.1	1885	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	339.657525126413	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	-178444664	True	NA	-22	True	AATAAA	-12	NA	178451152	178431434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178445425_178445536_178447455_178447587_178450241_178450412_178450965
transcript_120881.known	chr2	-	1616	9	FSM	ENSG00000180228.14	ENST00000424699.5	1616	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	334.724513592895	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATTTCAGGGAACATGAT	-178444663	True	NA	-117	True	NA	NA	NA	178451151	178431653	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178445425_178445536_178447504_178447587_178450241_178450412_178450965
transcript_120886.known	chr2	-	1780	8	FSM	ENSG00000180228.14	ENST00000676922.1	1780	8	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_5	267.623326520614	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	-178444669	True	NA	-22	True	AATAAA	-12	NA	178451157	178431434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447455_178447587_178450241_178450412_178450965
transcript_120887.known	chr2	-	1770	8	FSM	ENSG00000180228.14	ENST00000325748.9	1770	8	0	0	0	0	multi-exon	TRUE	canonical	3	655	junction_2	71.7504177617078	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTAATGGGTTACTTCCT	-178444687	True	NA	-1	True	AATAAA	-33	NA	178451175	178431413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447504_178447587_178450241_178450412_178450965
transcript_120894.known	chr2	-	1645	8	FSM	ENSG00000180228.14	ENST00000678053.1	1645	8	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_5	320.45853627168	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	-178444658	True	NA	-22	True	AATAAA	-12	NA	178451146	178431434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447455_178447587_178450365_178450412_178450965
transcript_120896.known	chr2	-	1717	8	FSM	ENSG00000180228.14	ENST00000677253.1	1717	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	404.702258910606	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCCTAAGTAAAATTTACA	-178444645	True	NA	-27	True	AATAAA	-7	NA	178451133	178431439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_178432255_178436144_178436320_178443266_178443385_178444421_178444501_178445425_178445536_178447504_178447587_178450241_178450412_178450965
transcript_120897.known	chr2	-	1546	7	FSM	ENSG00000180228.14	ENST00000678845.1	1546	7	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_6	267.134173528335	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	-178444654	True	NA	-22	True	AATAAA	-12	NA	178451142	178431434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447504_178447587_178450965
transcript_120901.known	chr2	-	1610	7	FSM	ENSG00000180228.14	ENST00000677689.1	1610	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_5	338.397202510107	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	-178444669	True	NA	-22	True	AATAAA	-12	NA	178451157	178431434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447455_178447587_178450965
transcript_120904.nic	chr2	-	1028	7	ISM	ENSG00000180228.14	ENST00000325748.9	1770	8	0	4632	0	-4070	5prime_fragment	FALSE	canonical	3	655	junction_1	71.6209156291342	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTATTGATCAGGGAT	-178444687	True	NA	NA	False	AATAAA	-16	NA	178451175	178436045	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447504_178447587_178450241_178450412_178450965
transcript_120905.known	chr2	-	1455	6	FSM	ENSG00000180228.14	ENST00000677981.1	1455	6	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_5	312.000256410151	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	-178444645	True	NA	-22	True	AATAAA	-12	NA	178451133	178431434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178450965
transcript_120909.known	chr2	-	3890	5	FSM	ENSG00000180228.14	ENST00000677806.1	3890	5	0	0	0	0	multi-exon	FALSE	canonical	3	787	junction_4	30.6838719851325	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTACAGGTGAAATTGGT	-178451268	False	NA	NA	False	NA	NA	NA	178451278	178440138	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_178443385_178444421_178444501_178447504_178447587_178450241_178450412_178450965
transcript_120911.known	chr2	+	1057	3	FSM	ENSG00000223960.8	ENST00000661271.1	1057	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	12	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTGTAGACAGTAATAAAT	178413837	False	NA	NA	False	NA	NA	NA	178413852	178434057	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_178414114_178430769_178430890_178433381
transcript_120912.known	chr2	-	1824	8	FSM	ENSG00000180228.14	ENST00000677386.1	1824	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	286.168496105468	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCCTAAGTAAAATTTACA	-178451268	False	NA	-27	True	AATAAA	-7	NA	178451278	178431439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443289_178443385_178444421_178444501_178447504_178447587_178450241_178450412_178450965
transcript_120913.known	chr2	+	1049	3	FSM	ENSG00000223960.8	ENST00000436616.4	1365	3	316	0	1	0	multi-exon	FALSE	canonical	2	4	junction_1	10.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTCTCATCAGCCACCT	178413229	True	NA	NA	False	AATAAA	-16	NA	178413969	178434091	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_178414114_178430694_178430890_178433381
transcript_120915.known	chr2	-	666	4	FSM	ENSG00000079150.19	ENST00000434643.6	666	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	22.2311093340441	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTGTATTTCTACTTT	-178478488	False	NA	NA	False	AATACA	-27	NA	178478499	178465769	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_178465932_178469651_178469783_178477061_178477214_178478278
transcript_120916.known	chr2	-	1030	5	FSM	ENSG00000079150.19	ENST00000233092.10	1030	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	27.141987768032	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCAGGAATGGTATGACT	-178477799	True	NA	0	True	AATAAA	-25	NA	178478575	178465598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_178465932_178469651_178469786_178473028_178473143_178477061_178477214_178478278
transcript_120920.known	chr2	+	13892	8	FSM	ENSG00000116095.11	ENST00000234453.10	13892	8	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	13.9488862842676	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTGGGGGAAAATGTTT	178478777	True	NA	4	True	AATAAA	-17	NA	178480456	178516463	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_178480910_178485640_178485758_178490658_178490815_178493852_178493990_178495495_178495661_178499210_178499255_178501060_178501177_178503759
transcript_120924.nic	chr2	+	784	3	ISM	ENSG00000116095.11	ENST00000234453.10	13892	8	-59	25650	-59	-3176	5prime_fragment	FALSE	canonical	3	75	junction_2	16.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAACTATAAACTTTTCCC	178480364	False	NA	NA	False	AAAAAG	-6	NA	178480397	178490813	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_178480910_178485640_178485758_178490658
transcript_120925.nic	chr2	+	571	2	ISM	ENSG00000116095.11	ENST00000453653.5	749	6	-283	9859	-7	-8238	5prime_fragment	FALSE	canonical	3	108	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAGGTAAGTGAATATAC	178478770	True	NA	NA	False	CATAAA	-18	NA	178480449	178485751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_178480910_178485640
transcript_120936.known	chr2	+	3002	5	FSM	ENSG00000237298.10	ENST00000657210.1	3002	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	5.43139024560011	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAGACTCTGTCTCAAAA	178522483	True	NA	NA	False	NA	NA	NA	178523166	178540779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_178523637_178531313_178531579_178535731_178535829_178537603_178537692_178538697
transcript_120938.known	chr2	+	2691	4	FSM	ENSG00000237298.10	ENST00000664161.1	2691	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	2.82842712474619	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAGACTCTGTCTCAAAA	178522529	True	NA	NA	False	NA	NA	NA	178523212	178540779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_178523637_178535731_178535829_178537603_178537692_178538697
transcript_120944.known	chr2	+	861	2	FSM	ENSG00000237298.10	ENST00000442329.7	861	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTACCCTGTGCGAGCG	178522529	True	NA	NA	False	AATAAA	-17	NA	178523212	178531750	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_178523637_178531313
transcript_120957.nnic	chr2	-	2817	3	NNC	ENSG00000163492.16	novel	2029	12	NA	NA	-1570	-129215	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	2.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCATTATGATGTGGAAGA	-179050589	True	NA	NA	False	AATAAA	-30	NA	179051707	179044965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_179047407_179049839_179050067_179051558
transcript_120959.known	chr2	-	10671	18	FSM	ENSG00000187231.14	ENST00000428443.8	10671	18	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_11	10.0131401557427	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGACATTCCTGTCTTT	-179262859	True	NA	NA	False	AATAAA	-33	NA	179264832	179101677	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_179110029_179112723_179112846_179115064_179115257_179116667_179116791_179117531_179117614_179121769_179121930_179123714_179123830_179124363_179124559_179132303_179132427_179143591_179143804_179146401_179146458_179149296_179149395_179151277_179151392_179172119_179172234_179176447_179176539_179183079_179183189_179191786_179191867_179264498
transcript_120975.known	chr2	-	3395	10	FSM	ENSG00000144331.20	ENST00000410066.7	3395	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	5.88364546438832	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTGTATTTTCAGTGT	NA	False	NA	-9	True	AATAAA	-17	NA	179861612	179441981	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_179443469_179444875_179444978_179445549_179445729_179446524_179446771_179483271_179483435_179518527_179518639_179544826_179544970_179769502_179769803_179770520_179770673_179861100
transcript_120976.nic	chr2	-	1768	3	ISM	ENSG00000144331.20	ENST00000410066.7	3395	10	225	326492	225	1056	5prime_fragment	FALSE	canonical	3	14	junction_2	3.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAATCTAACTACTTTTT	-179861109	True	NA	-11	True	AATAAA	-18	NA	179861387	179768473	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_179769803_179770520_179770673_179861100
transcript_120977.known	chr2	-	2392	20	FSM	ENSG00000163510.14	ENST00000404136.2	2392	20	0	0	0	0	multi-exon	TRUE	canonical	2	211	junction_15	28.2344753017985	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAGACAAGAACACGG	-180000468	True	NA	-73	True	GATAAA	-40	NA	180007113	179945620	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_179945716_179950511_179950733_179950824_179950927_179952470_179952599_179954204_179954358_179954956_179955035_179959021_179959083_179964546_179964629_179965877_179965983_179970500_179970564_179970649_179970857_179970940_179971077_179973192_179973247_179973633_179973803_179978189_179978319_179981751_179981998_179986694_179986806_179988576_179988645_179993314_179993455_180007069
transcript_120984.nic	chr2	-	1437	12	ISM	ENSG00000163510.14	ENST00000404136.2	2392	20	4	20288	4	-20288	5prime_fragment	FALSE	canonical	2	211	junction_7	28.2845634388374	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGGAAGAGGGAGAAGA	-180000464	True	NA	-32	True	NA	NA	NA	180007109	179965908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_179965983_179970500_179970564_179970649_179970857_179970940_179971077_179973192_179973247_179973633_179973803_179978189_179978319_179981751_179981998_179986694_179986806_179988576_179988645_179993314_179993455_180007069
transcript_120991.known	chr2	+	766	6	FSM	ENSG00000170035.16	ENST00000602291.5	766	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	309.946059823318	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGATAGCCAGACAGTGGAC	180979414	False	NA	NA	False	NA	NA	NA	180980390	181062849	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_180980547_180982017_180982237_180984042_180984094_181057692_181057826_181060664_181060813_181062790
transcript_120992.known	chr2	+	1556	6	FSM	ENSG00000170035.16	ENST00000602710.5	1556	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	303.176252368156	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAAGTCAGTCTTGTT	180980994	True	NA	31	True	AATAAA	-33	NA	180981123	181063441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_180981478_180982017_180982237_180984042_180984094_181057692_181057826_181060664_181060813_181062790
transcript_120993.nic	chr2	+	1529	6	NIC	ENSG00000170035.16	novel	1556	6	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_1	278.896683379348	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTTCCTGTCGTAATAT	180981012	False	NA	14	True	AATAAA	-16	NA	180981041	181063424	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_180981386_180982017_180982237_180984042_180984094_181057692_181057826_181060664_181060813_181062790
transcript_120996.known	chr2	+	1555	6	FSM	ENSG00000170035.16	ENST00000410062.9	1555	6	0	0	0	0	multi-exon	FALSE	canonical	3	581	junction_1	81.4803043686019	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTCCTGTCGTAATATT	180979270	True	NA	15	True	AATAAA	-17	NA	180980604	181063425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_180980974_180982017_180982237_180984042_180984094_181057692_181057826_181060664_181060813_181062790
transcript_120997.known	chr2	+	2070	16	FSM	ENSG00000115232.14	ENST00000233573.6	2070	16	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	2.47655674946756	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTAGGAATATTTTCCTTT	181457322	True	NA	NA	False	AAAAAG	-16	NA	181457427	181509805	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_181457852_181458195_181458318_181474959_181475067_181475158_181475289_181478756_181478825_181480136_181480267_181481597_181481684_181482359_181482423_181482513_181482652_181485880_181485993_181493324_181493420_181494721_181494813_181495370_181495417_181495782_181495938_181498622_181498778_181509657
transcript_120998.known	chr2	+	592	3	FSM	ENSG00000115232.14	ENST00000484404.1	592	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCATGATTTTGATACGA	181457686	False	NA	NA	False	AGTAAA	-25	NA	181457712	181475290	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_181457852_181458195_181458318_181474959
transcript_121.known	SIRV3	-	161	1	FSM	SIRV3D	SIRV311	161	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATAAAGATTTCGACTT	NA	False	NA	NA	False	NA	NA	NA	4762	4601	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV3_-_4600_4800
transcript_1210.known	chr1	-	6434	10	FSM	ENSG00000189339.12	ENST00000617444.5	6434	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_8	65.3669603559232	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTGTTTTCTTCCTTG	-1692466	True	NA	-9	True	AATAAA	-14	NA	1692795	1661477	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1666020_1668326_1668473_1669663_1669737_1670097_1670152_1671508_1671630_1675462_1675591_1676063_1676200_1676377_1676847_1690975_1691394_1692448
transcript_121001.known	chr2	+	5308	18	FSM	ENSG00000138434.17	ENST00000431877.7	5308	18	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	5.27512934622244	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTAGTGGTTTCTTAA	181891626	True	NA	6	True	AATAAA	-19	NA	181891729	181930738	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_181892278_181892614_181892661_181896029_181896080_181896907_181896965_181898879_181898920_181899013_181899113_181900695_181900905_181901765_181902467_181909898_181909972_181913844_181913934_181915215_181916428_181918597_181918676_181918754_181918883_181919295_181919447_181920596_181920663_181921947_181922413_181928160_181928279_181929560
transcript_121004.known	chr2	+	4987	17	FSM	ENSG00000138434.17	ENST00000409001.5	4987	17	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_14	6.45053292372033	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTAGTGGTTTCTTAA	181891947	False	NA	6	True	AATAAA	-19	NA	181891984	181930738	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_181892278_181892614_181892661_181896029_181896080_181896907_181896965_181898879_181898920_181899013_181899113_181900695_181900905_181901765_181902467_181909898_181909972_181913844_181913934_181915215_181916428_181918597_181918676_181918754_181918883_181919295_181919447_181921947_181922413_181928160_181928279_181929560
transcript_121009.known	chr2	+	2526	2	FSM	ENSG00000138434.17	ENST00000480753.1	2526	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGGAGTCTTTATTTTGA	181891810	False	NA	9	True	AATAAA	-22	NA	181891832	181894695	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_181892278_181892614
transcript_121010.known	chr2	+	501	4	FSM	ENSG00000150722.11	ENST00000479855.1	501	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	5.90668171555645	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTACAGTGATTCTTCT	182030609	False	NA	2	True	ATTAAA	-12	NA	182030882	182117511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_182030980_182061441_182061480_182063730_182063792_182117206
transcript_121012.known	chr2	+	20144	24	FSM	ENSG00000077232.19	ENST00000264065.12	20144	24	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_11	60.5025581799134	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTCACCAATTTTCAGC	182704135	True	NA	NA	False	AATAAA	-20	NA	182716256	182794464	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_182716484_182717015_182717073_182717940_182718291_182720006_182720170_182722024_182722076_182728575_182728659_182728862_182728995_182729847_182729942_182731029_182731108_182732498_182732543_182736248_182736387_182740298_182740389_182741242_182741357_182743597_182743713_182751657_182751786_182752071_182752189_182755002_182755105_182756313_182756470_182757691_182757826_182758836_182758891_182759159_182759308_182762681_182762802_182775315_182775421_182777120
transcript_121020.known	chr2	+	20086	24	FSM	ENSG00000077232.19	ENST00000680258.1	20086	24	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_13	128.153883161519	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTCACCAATTTTCAGC	182704133	True	NA	NA	False	AATAAA	-20	NA	182716254	182794464	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_182716484_182717015_182717073_182717940_182718291_182720006_182720170_182722024_182722076_182728575_182728659_182728862_182728995_182729847_182729942_182731029_182731108_182732498_182732543_182736248_182736387_182740298_182740389_182741242_182741357_182743657_182743713_182751657_182751786_182752071_182752189_182755002_182755105_182756313_182756470_182757691_182757826_182758836_182758891_182759159_182759308_182762681_182762802_182775315_182775421_182777120
transcript_121027.known	chr2	+	20006	23	FSM	ENSG00000077232.19	ENST00000616986.5	20006	23	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_10	117.921286255138	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTCACCAATTTTCAGC	182704135	True	NA	NA	False	AATAAA	-20	NA	182716256	182794464	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_182716484_182717015_182717073_182717940_182718291_182720006_182720170_182722024_182722076_182728575_182728659_182728862_182728995_182729847_182729942_182731029_182731108_182732498_182732543_182740298_182740389_182741242_182741357_182743597_182743713_182751657_182751786_182752071_182752189_182755002_182755105_182756313_182756470_182757691_182757826_182758836_182758891_182759159_182759308_182762681_182762802_182775315_182775421_182777120
transcript_121039.nic	chr2	+	1824	13	ISM	ENSG00000077232.19	ENST00000680258.1	20086	24	-227	53134	-227	946	5prime_fragment	FALSE	canonical	3	420	junction_11	62.6422824899888	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCTACTTAAAAATGATCAT	182715999	False	NA	NA	False	ACTAAA	-3	NA	182716027	182741330	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_182716484_182717015_182717073_182717940_182718291_182720006_182720170_182722024_182722076_182728575_182728659_182728862_182728995_182729847_182729942_182731029_182731108_182732498_182732543_182736248_182736387_182740298_182740389_182741242
transcript_121040.nic	chr2	+	1481	12	ISM	ENSG00000077232.19	ENST00000616986.5	20006	23	-24	53134	-22	946	5prime_fragment	FALSE	canonical	3	67	junction_10	152.53640670968	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCTACTTAAAAATGATCAT	182704111	True	NA	NA	False	ACTAAA	-3	NA	182716232	182741330	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_182716484_182717015_182717073_182717940_182718291_182720006_182720170_182722024_182722076_182728575_182728659_182728862_182728995_182729847_182729942_182731029_182731108_182732498_182732543_182740298_182740389_182741242
transcript_121041.nic	chr2	+	1409	11	ISM	ENSG00000077232.19	ENST00000680258.1	20086	24	0	58088	0	3639	5prime_fragment	FALSE	canonical	3	476	junction_8	47.4342703116639	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTATTTTGGTATGAATCA	182704133	True	NA	NA	False	TTTAAA	-16	NA	182716254	182736376	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_182716484_182717015_182717073_182717940_182718291_182720006_182720170_182722024_182722076_182728575_182728659_182728862_182728995_182729847_182729942_182731029_182731108_182732498_182732543_182736248
transcript_121043.nic	chr2	+	848	5	ISM	ENSG00000077232.19	ENST00000680258.1	20086	24	-10	72401	-10	-727	5prime_fragment	FALSE	canonical	3	520	junction_4	34.9025428873026	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGAATTTGGTAAGTTT	182704123	True	NA	NA	False	TTTAAA	-45	NA	182716244	182722063	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_182716484_182717015_182717073_182717940_182718291_182720006_182720170_182722024
transcript_121044.nic	chr2	+	696	4	ISM	ENSG00000077232.19	ENST00000680258.1	20086	24	-22	74420	-22	-2746	5prime_fragment	FALSE	canonical	3	531	junction_3	32.4995726467629	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAGCATATGAAGTACTCA	182704111	True	NA	-18	True	AATAAA	-1	NA	182716232	182720044	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_182716484_182717015_182717073_182717940_182718291_182720006
transcript_121045.nic	chr2	+	759	4	ISM	ENSG00000077232.19	ENST00000680258.1	20086	24	-22	74357	-22	-2683	5prime_fragment	FALSE	canonical	3	531	junction_3	32.4995726467629	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGACTTGAGGATAATCAAG	182704111	True	NA	45	True	AAAAAG	-21	NA	182716232	182720107	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_182716484_182717015_182717073_182717940_182718291_182720006
transcript_121048.known	chr2	-	2637	6	FSM	ENSG00000162998.5	ENST00000295113.5	2637	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	2.85657137141714	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGCTATGTTTCCTTCTA	-182866491	True	NA	NA	False	AATAAA	-19	NA	182866637	182833274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_182834966_182837947_182838012_182838408_182838614_182842477_182842544_182858785_182858834_182866074
transcript_121052.known	chr2	-	20332	31	FSM	ENSG00000061676.15	ENST00000361354.9	20332	31	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_29	88.3227918238297	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAATGTGTTATGTGTCCT	-183030230	True	NA	-2	True	AATAAA	-19	NA	183038457	182909114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_182925819_182926815_182926906_182928116_182928227_182928782_182928900_182930694_182930789_182934751_182934833_182935292_182935376_182942069_182942164_182952404_182952503_182952792_182952924_182953112_182953332_182956461_182956594_182957456_182957597_182962158_182962279_182964675_182964809_182967215_182967362_182976892_182976952_182978833_182978916_182981243_182981377_182982820_182982928_182983285_182983383_182986170_182986228_182989029_182989187_182994838_182994888_182995700_182995839_183001952_183002044_183002126_183002270_183002973_183003031_183003232_183003326_183023805_183023917_183037991
transcript_121054.known	chr2	-	4989	32	FSM	ENSG00000061676.15	ENST00000360982.2	4989	32	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_30	178.593009547723	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTAAGATCCTTGGAT	-183038839	False	19	1	True	AATAAA	-28	NA	183038858	182924876	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_182925819_182926815_182926906_182928116_182928227_182928782_182928900_182930694_182930789_182934751_182934833_182935292_182935376_182942069_182942164_182952404_182952503_182952792_182952924_182953112_182953332_182956461_182956594_182957456_182957597_182962158_182962279_182964675_182964809_182967215_182967362_182976892_182976952_182978833_182978916_182981243_182981377_182982820_182982928_182983285_182983383_182986170_182986228_182989029_182989187_182994838_182994888_182995700_182995839_183001952_183002044_183002126_183002270_183002973_183003031_183003232_183003326_183023805_183023917_183024977_183024996_183037991
transcript_121060.known	chr2	+	1545	9	FSM	ENSG00000163002.13	ENST00000295119.9	1545	9	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_1	31.034003528388	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATTAGTCTGTTTGCA	183118815	True	NA	27	True	AATAAA	-15	NA	183124442	183161680	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_183124498_183128286_183128458_183130417_183130546_183133565_183133624_183151507_183151650_183157443_183157514_183158282_183158412_183159487_183159653_183161053
transcript_121061.known	chr2	+	998	8	FSM	ENSG00000163002.13	ENST00000374930.7	998	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	126.263249456306	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAGAAAGAAGCCTTTTT	183118784	True	NA	NA	False	NA	NA	NA	183124411	183161244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_183124498_183128286_183128458_183130417_183130546_183133565_183133624_183157443_183157514_183158282_183158412_183159487_183159653_183161053
transcript_121069.known	chr2	+	2032	10	FSM	ENSG00000065548.18	ENST00000337859.11	2032	10	0	0	0	0	multi-exon	FALSE	canonical	3	547	junction_6	77.3114592307962	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGCCTTTTTTTAAGTT	186478200	True	NA	NA	False	AATAAA	-37	NA	186486259	186509361	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_186486458_186495232_186495335_186500181_186500294_186501272_186501426_186502495_186502588_186504031_186504215_186505450_186505598_186505739_186505842_186506712_186506837_186508542
transcript_121078.nic	chr2	+	845	6	ISM	ENSG00000065548.18	ENST00000337859.11	2032	10	-53	5195	-46	67	5prime_fragment	FALSE	canonical	3	570	junction_4	82.2498632217708	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGAAAGAAGATGAAAT	186478147	True	NA	NA	False	GATAAA	-7	NA	186486206	186504166	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_186486458_186495232_186495335_186500181_186500294_186501272_186501426_186502495_186502588_186504031
transcript_121080.nic	chr2	+	649	5	ISM	ENSG00000065548.18	ENST00000337859.11	2032	10	0	6782	0	1204	5prime_fragment	FALSE	canonical	3	570	junction_4	89.2815070437322	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAATAGTATGTCCTTTT	186478200	True	NA	76	True	AAGAAA	-11	NA	186486259	186502579	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_186486458_186495232_186495335_186500181_186500294_186501272_186501426_186502495
transcript_121085.known	chr2	+	304	2	FSM	ENSG00000065548.18	ENST00000477672.1	304	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATCCACGTCAGGTAAG	186478207	True	NA	NA	False	NA	NA	NA	186486266	186495319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_186486458_186495206
transcript_121086.known	chr2	+	7039	30	FSM	ENSG00000138448.12	ENST00000261023.8	7039	30	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_4	15.4056524055435	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTGTATGGGGTTTAT	186586904	True	NA	8	True	AATAAA	-19	NA	186590055	186680901	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_186590524_186602020_186602152_186622338_186622431_186625472_186625588_186630796_186630859_186633328_186633375_186636081_186636208_186637064_186637110_186638276_186638321_186638408_186638466_186640914_186640968_186641385_186641589_186646685_186646878_186649839_186649886_186651981_186652090_186654649_186654709_186656246_186656402_186659037_186659176_186663767_186663836_186664493_186664642_186665125_186665219_186666703_186666784_186667149_186667231_186667670_186667777_186668761_186668921_186669700_186669815_186675603_186675718_186675819_186675928_186676812_186676936_186677196
transcript_121091.known	chr2	+	5731	8	FSM	ENSG00000144369.14	ENST00000304698.10	5731	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	5.28378343111627	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGAGCATTGTTTAATTT	186691872	True	NA	10	True	AATAAA	-17	NA	186694059	186765959	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_186694412_186740227_186740462_186743482_186743576_186747091_186747251_186751133_186751305_186753932_186754050_186761112_186761237_186761478
transcript_121098.known	chr2	-	3649	8	FSM	ENSG00000003436.16	ENST00000392365.5	3649	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_7	8.27585620454871	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTGTTGTACTCGTAA	-187513373	True	NA	NA	False	AGTAAA	-24	NA	187513641	187464229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_187467043_187467752_187467933_187484123_187484217_187484810_187484988_187488336_187488376_187496880_187497079_187503647_187503771_187513615
transcript_121100.nnic	chr2	-	672	2	NNC	ENSG00000003436.16	novel	804	5	NA	NA	-43	-60961	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-187564038	True	NA	-1	True	AATAAA	-22	NA	187565803	187557976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_187558395_187565549
transcript_121105.nnic	chr2	+	2410	3	NNC	ENSG00000289205.1	novel	1739	2	NA	NA	-337	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_1	155	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGTCTGAGGGATTTT	188033347	True	NA	28	True	AATAAA	-17	NA	188033456	188040601	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_188034061_188035422_188035757_188039129
transcript_121107.nnic	chr2	+	2230	3	NNC	ENSG00000289205.1	novel	1739	2	NA	NA	-337	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_1	59.5	102	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGTCTGAGGGATTTT	188033347	True	NA	28	True	AATAAA	-17	NA	188033456	188040601	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_188034061_188035602_188035757_188039129
transcript_121109.nnic	chr2	+	2708	3	NNC	ENSG00000289205.1	novel	1739	2	NA	NA	-66	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_1	155	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGTCTGAGGGATTTT	188033686	False	NA	28	True	AATAAA	-17	NA	188033727	188040601	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_188034061_188034853_188035757_188039129
transcript_121111.nnic	chr2	-	823	3	NNC	ENSG00000231689.3	novel	560	4	NA	NA	251910	-78503	at_least_one_novel_splicesite	TRUE	canonical	3	18	junction_1	3	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTAGCTTGGGCTAATT	-188034303	True	NA	3	True	ATTAAA	-25	NA	188035724	187791318	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_187791911_187884159_187884262_188035595
transcript_121118.nic	chr2	+	2544	14	NIC	ENSG00000144366.16	novel	2643	13	NA	NA	-12	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_12	165.50593046097	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACCCA	188291841	False	NA	34	True	NA	NA	NA	188291861	188595059	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_188292167_188383762_188383890_188466474_188466569_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180_188541319_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188589739_188589751_188593939
transcript_121134.known	chr2	+	2643	13	FSM	ENSG00000144366.16	ENST00000409843.5	2643	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	152.555636481325	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACCCA	188291650	False	NA	34	True	NA	NA	NA	188291668	188595059	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_188292167_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180_188541319_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188589739_188589751_188593939
transcript_121138.nic	chr2	+	2508	13	NIC	ENSG00000144366.16	novel	2643	13	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	166.642248211217	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACCCA	188291836	False	NA	34	True	NA	NA	NA	188291856	188595059	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_188292220_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180_188541319_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188589739_188589751_188593939
transcript_12114.known	chr1	+	4689	18	FSM	ENSG00000155363.19	ENST00000468624.5	4689	18	0	0	0	0	multi-exon	TRUE	canonical	3	53	junction_1	98.2317012375724	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTATGCAAAAGCCTTGA	112671969	True	NA	11	True	AAGAAA	-20	NA	112674719	112700726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_112674730_112674831_112675050_112688934_112689139_112689414_112689651_112689839_112690099_112691664_112691800_112692760_112692930_112694017_112694173_112694452_112694630_112694748_112694897_112695415_112695575_112696147_112696252_112696436_112696535_112696629_112696847_112697993_112698112_112698286_112699811_112699893_112700341_112700415
transcript_121145.nnic	chr2	+	2615	13	NNC	ENSG00000144366.16	novel	3347	12	NA	NA	3	16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	147.854916688248	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTTACTGCTCAGTTTA	188286637	False	NA	50	True	NA	NA	NA	188292774	188595075	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_188293113_188334340_188334468_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180_188541319_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188593939
transcript_121150.known	chr2	+	3294	12	FSM	ENSG00000144366.16	ENST00000409830.6	3294	12	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	67.2415161013143	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATTGCATAATTCATTT	188285736	True	NA	NA	False	AATAAA	-15	NA	188291873	188595926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_188292167_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180_188541319_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188593939
transcript_121154.known	chr2	+	3347	12	FSM	ENSG00000144366.16	ENST00000359135.7	3347	12	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	80.1356288317778	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCATAATTCATTTGTTAA	188286634	False	NA	NA	False	AATAAA	-20	NA	188292771	188595931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_188293113_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180_188541319_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188593939
transcript_121161.known	chr2	+	1932	12	FSM	ENSG00000144366.16	ENST00000409609.5	1932	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	115.932011993921	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCCTTGTGTCTGAGTT	188293778	False	NA	NA	False	NA	NA	NA	188293817	188594281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_188294394_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180_188541319_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188593939
transcript_121175.known	chr2	+	1595	7	FSM	ENSG00000144366.16	ENST00000410051.5	1595	7	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	83.8876563559198	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACTTAAAATAATGAAAGT	188285808	True	NA	NA	False	NA	NA	NA	188291945	188542122	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_188292167_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180
transcript_121182.known	chr2	+	1242	7	FSM	ENSG00000144366.16	ENST00000409637.7	1242	7	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	103.825842426419	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATGAAAATAAATATTCTT	188287035	True	NA	-25	True	NA	NA	NA	188292838	188541716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_188293113_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180
transcript_121195.known	chr2	-	6829	54	FSM	ENSG00000204262.14	ENST00000374866.9	6829	54	0	0	0	0	multi-exon	FALSE	canonical	1	25	junction_52	16.9107135305129	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAAAGCTCTCAAATTTC	-189178366	True	NA	NA	False	AATAAA	-16	NA	189179761	189031897	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_189034217_189034915_189035156_189036615_189036804_189039271_189039564_189041585_189041694_189042719_189042774_189043150_189043259_189045178_189045233_189045799_189045908_189048208_189048263_189049346_189049455_189050568_189050677_189051319_189051482_189052171_189052226_189052748_189052803_189052910_189053019_189053423_189053478_189053894_189053949_189054158_189054213_189056972_189057027_189057319_189057428_189058428_189058528_189058848_189058894_189060729_189060784_189061561_189061616_189062864_189062919_189063009_189063064_189063171_189063271_189063979_189064034_189064556_189064656_189065003_189065058_189066389_189066498_189066728_189066783_189068014_189068114_189068225_189068271_189068785_189068885_189072039_189072094_189075392_189075438_189078515_189078570_189079062_189079108_189079977_189080032_189080989_189081044_189083983_189084038_189085159_189085214_189085718_189085773_189086725_189086771_189088694_189088773_189092309_189092421_189097276_189097331_189098726_189098760_189100106_189100140_189104263_189104278_189110224_189110450_189179507
transcript_121203.known	chr2	+	4297	21	FSM	ENSG00000115368.10	ENST00000427960.5	4297	21	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	108.872632006395	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGATAATATGAACATGTAT	189434851	True	NA	25	True	AATAAA	-29	NA	189441481	189475552	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_189441579_189448378_189448509_189449244_189450969_189451804_189451896_189455319_189455445_189457310_189457382_189458752_189458873_189459335_189459425_189462483_189462643_189463693_189463754_189463845_189463962_189465078_189465255_189466424_189466583_189467467_189467649_189468474_189468570_189469343_189469440_189470075_189470246_189470818_189470879_189474185_189474333_189474716_189474809_189475212
transcript_121208.known	chr2	+	2647	21	FSM	ENSG00000115368.10	ENST00000314761.9	2647	21	0	0	0	0	multi-exon	FALSE	canonical	3	393	junction_13	49.9828970748995	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGATAATATGAACATGTAT	189434843	True	NA	25	True	AATAAA	-29	NA	189441473	189475552	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_189441579_189448378_189448509_189450902_189450969_189451804_189451896_189455319_189455445_189457310_189457382_189458752_189458873_189459335_189459425_189462483_189462643_189463693_189463754_189463845_189463962_189465078_189465255_189466424_189466583_189467467_189467649_189468474_189468570_189469343_189469440_189470075_189470246_189470818_189470879_189474185_189474333_189474716_189474809_189475212
transcript_121227.known	chr2	+	706	5	FSM	ENSG00000115368.10	ENST00000472286.5	706	5	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_4	53.2681893816563	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATCCTTATTTTTGTGTG	189434831	True	NA	NA	False	NA	NA	NA	189441461	189455621	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_189441579_189448378_189448509_189450902_189450969_189451804_189451896_189455319
transcript_121229.known	chr2	-	3330	8	FSM	ENSG00000138449.11	ENST00000261024.7	3330	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.534522483824849	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCCTGAATTCTGTTCC	-189580770	True	NA	NA	False	TATAAA	-20	NA	189580786	189560589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_189562192_189563583_189564226_189565353_189565600_189571714_189571842_189572845_189572962_189575160_189575321_189579812_189579881_189580417
transcript_121230.known	chr2	+	2411	6	FSM	ENSG00000138381.10	ENST00000260952.9	2411	6	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_2	43.5320571533209	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTGAATTTTCATTTT	189657126	True	NA	65	True	TTTAAA	-6	NA	189661458	189670831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_189661611_189663900_189663955_189665375_189665452_189666040_189667597_189667763_189667946_189670440
transcript_121233.known	chr2	+	643	4	FSM	ENSG00000286053.2	ENST00000607829.6	643	4	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_2	47.1333804808817	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACTCAAATTTTGTTTA	189657126	True	NA	9	True	AATAAA	-19	NA	189661458	189666401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_189661611_189663900_189663955_189665375_189665452_189666040
transcript_121240.known	chr2	-	1910	9	FSM	ENSG00000128694.12	ENST00000264151.10	1910	9	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	27.1658678307909	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGGAATCCTTTCATTC	-189762029	True	NA	-7	True	AATAAA	-18	NA	189762792	189746659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_189747169_189750549_189750657_189752652_189752725_189752848_189752980_189753915_189754065_189754140_189754346_189755172_189755561_189761419_189761661_189762684
transcript_121243.nic	chr2	-	2182	9	NIC	ENSG00000128694.12	novel	1910	9	NA	NA	-7	0	intron_retention	FALSE	canonical	3	18	junction_8	40.4720196555596	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGGAATCCTTTCATTC	-189762020	True	NA	-7	True	AATAAA	-18	NA	189762783	189746659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_189747332_189750549_189750657_189752652_189752725_189752848_189752980_189753915_189754065_189754140_189754346_189755172_189755561_189761419_189761661_189762566
transcript_121244.nic	chr2	-	2076	9	NIC	ENSG00000128694.12	novel	1910	9	NA	NA	-2	0	intron_retention	FALSE	canonical	3	81	junction_1	20.6212117733173	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGGAATCCTTTCATTC	-189762032	True	NA	-7	True	AATAAA	-18	NA	189762795	189746659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_189747332_189750549_189750657_189752652_189752725_189752848_189752980_189753915_189754065_189754140_189754346_189755172_189755561_189761419_189761661_189762684
transcript_121249.known	chr2	-	914	4	FSM	ENSG00000128694.12	ENST00000517895.5	914	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	48.8330489183981	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCATAGAACATTTGGCCA	-189762029	True	NA	NA	False	AATAAA	-34	NA	189762792	189754286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_189754346_189755172_189755561_189761419_189761661_189762566
transcript_121251.known	chr2	+	508	3	FSM	ENSG00000253559.1	ENST00000520651.1	508	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTAATGTATTATTTATGA	NA	False	NA	7	True	AATAAA	-22	NA	189762703	189765556	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_189762993_189764854_189764976_189765458
transcript_121252.known	chr2	+	3734	19	FSM	ENSG00000151687.15	ENST00000441800.5	3734	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.11309460580487	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTCAGTTTCTTTTGGC	NA	False	NA	NA	False	AATAAA	-16	NA	189674289	189761193	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_189674831_189689526_189689965_189692254_189692419_189693073_189693178_189694980_189695162_189696149_189696370_189705022_189705225_189706937_189707147_189711048_189711154_189719571_189719814_189720618_189720788_189727822_189728098_189728266_189728421_189737682_189737842_189738564_189738683_189741341_189741452_189743274_189743475_189744741_189744789_189761097
transcript_121266.known	chr2	+	3156	13	FSM	ENSG00000064933.19	ENST00000441310.7	3156	13	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_3	60.2755247914847	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGATTCTCAAGAACCAAC	189775955	True	NA	22	True	AATAAA	-18	NA	189784449	189877629	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_189784594_189791789_189791942_189795768_189795952_189805651_189805755_189818016_189818181_189843963_189844081_189852654_189852778_189853938_189854083_189854238_189855129_189863742_189864229_189867798_189867930_189873495_189873657_189877271
transcript_121281.known	chr2	+	2576	12	FSM	ENSG00000064933.19	ENST00000447232.6	2576	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	141.254825120541	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGATTCTCAAGAACCAAC	189776049	True	NA	22	True	AATAAA	-18	NA	189784543	189877629	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_189784594_189791789_189791942_189795768_189795952_189805651_189805755_189818016_189818181_189843963_189844081_189852654_189852778_189853938_189854083_189854238_189855129_189867798_189867930_189873495_189873657_189877271
transcript_121282.known	chr2	+	2795	12	FSM	ENSG00000064933.19	ENST00000409823.7	2795	12	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	134.396170252401	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAATATGTTTAAGAAGAT	189776006	True	NA	-7	True	NA	NA	NA	189784500	189877436	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_189784594_189791789_189791942_189795768_189795952_189805651_189805755_189818016_189818181_189852654_189852778_189853938_189854083_189854238_189855129_189863742_189864229_189867798_189867930_189873495_189873657_189877271
transcript_121293.nic	chr2	+	2439	10	ISM	ENSG00000064933.19	ENST00000441310.7	3156	13	-372	13840	-7	-325	5prime_fragment	FALSE	canonical	3	355	junction_3	51.5471736481362	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGAGAGCCATTGAACAG	189783861	True	NA	NA	False	ACTAAA	-26	NA	189784077	189863789	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_189784594_189791789_189791942_189795768_189795952_189805651_189805755_189818016_189818181_189843963_189844081_189852654_189852778_189853938_189854083_189854238_189855129_189863742
transcript_121298.nic	chr2	+	2183	9	ISM	ENSG00000064933.19	ENST00000441310.7	3156	13	-372	22710	-7	2157	5prime_fragment	FALSE	canonical	3	355	junction_3	53.6067859510342	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAATGTAATAGATAATAA	189783861	True	NA	NA	False	AATGAA	-29	NA	189784077	189854919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_189784594_189791789_189791942_189795768_189795952_189805651_189805755_189818016_189818181_189843963_189844081_189852654_189852778_189853938_189854083_189854238
transcript_121311.known	chr2	+	948	5	FSM	ENSG00000064933.19	ENST00000374826.8	948	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	199.008165661613	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTCATGTTCAAAATAATT	189776013	True	NA	NA	False	ATTAAA	-16	NA	189784507	189806846	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_189784594_189791789_189791942_189795768_189795952_189805651_189805755_189806422
transcript_121312.nic	chr2	+	663	5	ISM	ENSG00000064933.19	ENST00000421722.5	2285	10	-85	46024	-7	-91	5prime_fragment	FALSE	canonical	3	355	junction_3	64.1964757599668	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGTAAAGATGAAATAAAAAA	189775948	True	NA	NA	False	AAGAAA	-26	NA	189784442	189818090	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_189784594_189791789_189791942_189795768_189795952_189805651_189805755_189818016
transcript_121315.known	chr2	-	2150	5	FSM	ENSG00000128699.14	ENST00000392349.9	2150	5	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_4	373.856590151892	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAGCAACTGAATTCG	-189777337	True	NA	1	True	ATTAAA	-20	NA	189784339	189770266	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_189771903_189775564_189775717_189782421_189782603_189783013_189783124_189784268
transcript_121319.nnic	chr2	-	1214	5	NNC	ENSG00000128699.14	novel	2150	5	NA	NA	258	-3	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_4	400.396912450633	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACATATTTCTCGTTTTAT	-189777058	False	NA	-4	True	ATTAAA	-17	NA	189784060	189771313	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_189771903_189775564_189775717_189782421_189782603_189783013_189783124_189783878
transcript_121322.known	chr2	+	1882	4	FSM	ENSG00000064933.19	ENST00000409985.5	1882	4	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_3	69.6036397515724	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTCTGTCTTCATTTCA	189775955	True	NA	20	True	ATTAAA	-23	NA	189784449	189807054	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_189784594_189791789_189791942_189795768_189795952_189805651
transcript_121326.known	chr2	-	2009	4	FSM	ENSG00000128699.14	ENST00000392350.7	2009	4	0	0	0	0	multi-exon	FALSE	canonical	3	549	junction_3	189.504617357995	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAAAAGCCCTCCAAATT	-189777362	True	NA	-15	True	AATAAA	-23	NA	189784364	189770322	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_189771903_189775564_189775717_189782421_189782603_189784268
transcript_121330.nnic	chr2	-	1093	4	NNC	ENSG00000128699.14	novel	2009	4	NA	NA	269	-3	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_3	427.092495836675	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACATATTTCTCGTTTTAT	-189777047	False	NA	-4	True	ATTAAA	-17	NA	189784049	189771313	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_189771903_189775564_189775717_189782421_189782603_189783878
transcript_121338.known	chr2	-	2434	14	FSM	ENSG00000198130.16	ENST00000359678.10	2434	14	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_10	34.731088677294	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTTTCTCCTTCATCCC	-190315639	True	NA	NA	False	AATAAA	-16	NA	190319826	190203919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_190205233_190208879_190208914_190212955_190213076_190244886_190244969_190246153_190246213_190249639_190249727_190252161_190252308_190261155_190261235_190287585_190287639_190290404_190290486_190294545_190294631_190296812_190296954_190310753_190310797_190319715
transcript_121342.known	chr2	-	2463	13	FSM	ENSG00000198130.16	ENST00000392332.7	2463	13	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	129.499758687034	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATAGTTTCTCCTTCATCC	-190315703	True	NA	NA	False	AATAAA	-15	NA	190319890	190203920	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_190205233_190212955_190213076_190244886_190244969_190246153_190246213_190249639_190249727_190252161_190252308_190261155_190261235_190287585_190287639_190290404_190290486_190294545_190294631_190296812_190296954_190310753_190310797_190319715
transcript_121343.nic	chr2	-	1368	13	ISM	ENSG00000198130.16	ENST00000359678.10	2434	14	-43	4756	21	0	5prime_fragment	FALSE	canonical	3	443	junction_9	35.0428309358705	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATCAAACCTGAAAC	-190315682	True	NA	16	True	NA	NA	NA	190319869	190208675	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_190208914_190212955_190213076_190244886_190244969_190246153_190246213_190249639_190249727_190252161_190252308_190261155_190261235_190287585_190287639_190290404_190290486_190294545_190294631_190296812_190296954_190310753_190310797_190319715
transcript_121346.known	chr2	+	2044	7	FSM	ENSG00000151689.13	ENST00000392329.7	2044	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6.81705377873919	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGGCTCATGCCTGTAA	190343484	True	NA	NA	False	AATAAA	-14	NA	190343588	190371665	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_190343962_190348887_190349032_190360038_190360307_190362626_190362688_190366694_190366896_190369102_190369278_190370843
transcript_121347.known	chr2	+	1919	6	FSM	ENSG00000151689.13	ENST00000322522.8	1919	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	2.57681974534503	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGGCTCATGCCTGTAA	190343465	True	NA	NA	False	AATAAA	-14	NA	190343569	190371665	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_190343962_190360038_190360307_190362626_190362688_190366694_190366896_190369102_190369278_190370843
transcript_121353.known	chr2	-	6172	9	FSM	ENSG00000189362.12	ENST00000409150.8	6172	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	4.55350140002175	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGGTTGGGGAAATGAGA	-190534018	True	NA	NA	False	AATAAA	-15	NA	190534722	190504337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_190509313_190510360_190510538_190514452_190514679_190516269_190516385_190517519_190517614_190518735_190518809_190518951_190519184_190525262_190525379_190534558
transcript_121368.known	chr2	+	2360	8	FSM	ENSG00000138386.17	ENST00000409581.5	2360	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	26.9390847230244	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAACAGGAAATTTTTAGC	190648444	False	NA	NA	False	GATAAA	-11	NA	190649069	190690919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_190649361_190659157_190659996_190670325_190670460_190673100_190673153_190683737_190683828_190685475_190685639_190687200_190687318_190690244
transcript_121378.known	chr2	-	4116	25	FSM	ENSG00000115415.20	ENST00000361099.8	4116	25	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_21	17.4140249192681	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGAGGTTTAGCTGTCA	-191010871	True	NA	-6	True	ATTAAA	-17	NA	191014171	190969148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_190970718_190974829_190974933_190975811_190975888_190976839_190977026_190978855_190979002_190979771_190979867_190980619_190980670_190982382_190982519_190983641_190983741_190984309_190984394_190985618_190985661_190986853_190986948_190987038_190987069_190989614_190989675_190991227_190991321_190995060_190995220_190997855_190998008_190998216_190998309_190999625_190999705_191001073_191001164_191007562_191007662_191008962_191009108_191009875_191010005_191013524_191013679_191014017
transcript_121382.known	chr2	-	4020	24	FSM	ENSG00000115415.20	ENST00000540176.6	4020	24	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_23	40.5424466589821	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGCTGAGGTTTAGCTGT	-191010931	False	NA	-8	True	ATTAAA	-15	NA	191014231	190969150	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_190970718_190974829_190974933_190975811_190975888_190976839_190977026_190978855_190979002_190979771_190979867_190980619_190980670_190982382_190982519_190983641_190983741_190984309_190984394_190985618_190985661_190986853_190986948_190987038_190987069_190989614_190989675_190991227_190991321_190995060_190995220_190997855_190998008_190998216_190998309_190999625_190999705_191001073_191001164_191007562_191007662_191008962_191009108_191009875_191010005_191014017
transcript_121386.known	chr2	-	3385	24	FSM	ENSG00000115415.20	ENST00000673952.1	3385	24	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_20	17.2989941467044	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATATCCTGAGTTATT	-191010928	True	NA	NA	False	TTTAAA	-19	NA	191014228	190974048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_190974933_190975811_190975888_190976839_190977026_190978855_190979002_190979771_190979867_190980619_190980670_190982382_190982519_190983641_190983741_190984309_190984394_190985618_190985661_190986853_190986948_190987038_190987069_190989614_190989675_190991227_190991321_190995060_190995220_190997855_190998008_190998216_190998309_190999625_190999705_191001073_191001164_191007562_191007662_191008962_191009108_191009875_191010005_191013524_191013679_191014017
transcript_121388.known	chr2	-	2716	23	FSM	ENSG00000115415.20	ENST00000392322.7	2716	23	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_19	16.9167260377034	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGTGGGAAAGTAGTTCT	-191010868	True	NA	-3	True	AATAAA	-17	NA	191014168	190975536	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_190975888_190976839_190977026_190978855_190979002_190979771_190979867_190980619_190980670_190982382_190982519_190983641_190983741_190984309_190984394_190985618_190985661_190986853_190986948_190987038_190987069_190989614_190989675_190991227_190991321_190995060_190995220_190997855_190998008_190998216_190998309_190999625_190999705_191001073_191001164_191007562_191007662_191008962_191009108_191009875_191010005_191013524_191013679_191014017
transcript_12139.known	chr1	-	1863	10	FSM	ENSG00000155367.16	ENST00000309276.11	1714	10	-145	-4	-145	0	multi-exon	FALSE	canonical	3	224	junction_5	25.2542625665011	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGTATTTGCTTTGA	NA	False	NA	NA	False	AATAAA	-18	NA	112715477	112709993	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_112710311_112710459_112710612_112710743_112710852_112711007_112711072_112711265_112711385_112711970_112712056_112712344_112712458_112712743_112713032_112713496_112713612_112714975
transcript_121396.known	chr2	-	3937	25	FSM	ENSG00000115415.20	ENST00000673942.1	3937	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	41.2896274303043	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAATATAATATGCACAC	-191010861	True	NA	-50	True	ATTAAA	-20	NA	191014161	190969311	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_190970718_190974829_190974933_190975811_190975888_190976839_190977026_190978855_190979002_190979771_190979867_190980619_190980670_190982382_190982519_190983641_190983741_190984309_190984394_190985618_190985661_190986853_190986942_190987038_190987069_190989614_190989675_190991227_190991321_190995060_190995220_190997855_190998008_190998216_190998309_190999625_190999705_191001073_191001164_191007562_191007662_191008962_191009108_191009875_191010005_191013524_191013679_191014017
transcript_1214.known	chr1	-	5948	9	FSM	ENSG00000189339.12	ENST00000611123.1	5948	9	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_8	21.1538264860048	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTTTGTTTTCTTCCTT	-1692697	False	NA	-10	True	AATAAA	-13	NA	1692728	1661478	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1666020_1668326_1668473_1669663_1669737_1670097_1670152_1671508_1671630_1675462_1675591_1676063_1676200_1676377_1676847_1692448
transcript_121401.known	chr2	+	4475	15	FSM	ENSG00000115419.13	ENST00000338435.8	4475	15	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_14	40.7389023326023	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATTGTTTTTTTTGTTT	190877157	True	NA	8	True	AATAAA	-16	NA	190880833	190935289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_190881471_190895151_190895249_190895603_190895726_190900563_190900694_190901946_190902027_190905003_190905168_190910262_190910322_190921023_190921057_190921144_190921204_190923916_190923984_190924542_190924594_190927305_190927483_190930436_190930569_190931544_190931638_190932715
transcript_121402.known	chr2	-	2560	24	FSM	ENSG00000138378.19	ENST00000392320.7	2560	24	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_13	1.67940938398504	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGCTTGCCTGTGTTTGGT	-191150966	True	NA	NA	False	AAGAAA	-30	NA	191150994	191029575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_191029867_191030971_191031081_191031449_191031517_191032957_191033150_191033489_191033627_191033910_191034006_191034547_191034598_191036163_191036300_191039198_191039298_191041064_191041149_191054489_191054535_191058017_191058112_191058201_191058220_191058709_191058770_191061728_191061822_191062761_191062921_191064806_191064959_191066429_191066516_191069692_191069772_191073097_191073191_191076226_191076326_191146612_191146758_191148075_191148205_191150946
transcript_121411.known	chr2	+	4933	31	FSM	ENSG00000128641.19	ENST00000304164.8	4933	31	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_1	73.3074499776266	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTATTGGTGCAGG	191239621	False	NA	28	True	CATAAA	-17	NA	191245527	191425389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_191245612_191276886_191277031_191296110_191296227_191329934_191330030_191341460_191341566_191346235_191346283_191350161_191350226_191360630_191360730_191362267_191362372_191363727_191363876_191364157_191364277_191369541_191369629_191370226_191370293_191381461_191381567_191383279_191383343_191385883_191386085_191387223_191387451_191390291_191390493_191392107_191392202_191393072_191393223_191396428_191396498_191400381_191400469_191400748_191400836_191402631_191402719_191408114_191408190_191409043_191409179_191411065_191411173_191414047_191414181_191414516_191414670_191416114_191416243_191423836
transcript_121420.nic	chr2	+	3729	30	NIC	ENSG00000128641.19	novel	5069	31	NA	NA	-29	67	combination_of_known_junctions	FALSE	canonical	3	57	junction_22	59.2848581968025	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTATTATTGGAATAGTT	191239468	True	NA	11	True	AATAAA	-18	NA	191245374	191424104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_191245627_191276886_191277031_191296110_191296227_191329934_191330030_191341460_191341566_191346235_191346283_191350161_191350226_191360630_191360730_191362267_191362372_191363727_191363876_191364157_191364277_191369541_191369629_191370226_191370293_191381461_191381567_191383279_191383343_191385883_191386085_191387223_191387451_191390291_191390493_191392107_191392202_191393072_191393223_191396428_191396498_191400381_191400469_191402631_191402719_191408114_191408190_191409043_191409179_191411065_191411173_191414047_191414181_191414516_191414670_191416114_191416243_191423836
transcript_121421.nic	chr2	+	4777	30	NIC	ENSG00000128641.19	novel	5069	31	NA	NA	-20	-225	combination_of_known_junctions	FALSE	canonical	3	57	junction_22	59.2848581968025	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCCTGAATCACAACTGTA	191239477	True	NA	7	True	AATAAA	-21	NA	191245383	191425161	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_191245627_191276886_191277031_191296110_191296227_191329934_191330030_191341460_191341566_191346235_191346283_191350161_191350226_191360630_191360730_191362267_191362372_191363727_191363876_191364157_191364277_191369541_191369629_191370226_191370293_191381461_191381567_191383279_191383343_191385883_191386085_191387223_191387451_191390291_191390493_191392107_191392202_191393072_191393223_191396428_191396498_191400381_191400469_191402631_191402719_191408114_191408190_191409043_191409179_191411065_191411173_191414047_191414181_191414516_191414670_191416114_191416243_191423836
transcript_121429.known	chr2	+	5026	29	FSM	ENSG00000128641.19	ENST00000339514.8	5026	29	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_22	43.7154965985421	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTATTGGTGCAGG	191245203	False	NA	28	True	CATAAA	-17	NA	191245275	191425389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_191245627_191276886_191277031_191296110_191296227_191329934_191330030_191341460_191341566_191346235_191346283_191350161_191350226_191360630_191360730_191362267_191362372_191363727_191363876_191364157_191364277_191369541_191369629_191370226_191370293_191381461_191381567_191383279_191383343_191385883_191386085_191387223_191387451_191390291_191390493_191392107_191392202_191393072_191393223_191396428_191396498_191400381_191400469_191408114_191408190_191409043_191409179_191411065_191411173_191414047_191414181_191414516_191414670_191416114_191416243_191423836
transcript_121441.nic	chr2	+	1152	10	ISM	ENSG00000128641.19	ENST00000392318.8	5069	31	-9	61513	-9	0	5prime_fragment	FALSE	canonical	3	295	junction_2	16.951637817372	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTACATCCGTGGAGAATC	191239488	True	NA	NA	False	GATAAA	-3	NA	191245394	191363873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_191245627_191276886_191277031_191296110_191296227_191329934_191330030_191341460_191341566_191346235_191346283_191350161_191350226_191360630_191360730_191362267_191362372_191363727
transcript_121449.known	chr2	+	2269	6	FSM	ENSG00000173559.15	ENST00000425611.9	2269	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	6.97423830966508	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAATTTTTGCCCTTTCAA	191677753	True	NA	NA	False	AATAAA	-26	NA	191678135	191686943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_191678706_191678989_191679129_191681945_191682018_191683728_191683805_191684229_191684297_191685598
transcript_121450.known	chr2	-	2799	10	FSM	ENSG00000144339.12	ENST00000272771.10	2799	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	4.5242829047783	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGTGCGTGGACTTTA	-192194790	True	NA	NA	False	AATAAA	-22	NA	192194933	191949045	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_191950408_191953678_191953838_191956254_191956379_191998261_191998322_191999059_191999209_192057678_192057776_192179667_192179695_192184353_192184484_192191879_192191990_192194352
transcript_121452.known	chr2	+	1852	2	FSM	ENSG00000286358.1	ENST00000652985.1	1852	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTAAACATAAATTTTTAT	193170086	True	NA	NA	False	NA	NA	NA	193170703	193172765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_193170803_193171012
transcript_121455.nnic	chr2	+	5399	11	NNC	ENSG00000196950.14	novel	2009	6	NA	NA	10306	0	intron_retention	FALSE	canonical	3	203	junction_2	330.605580715148	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCCAGTGTGTTTTCTTT	195582500	True	NA	16	True	AATAAA	-20	NA	195586282	195737700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_195586418_195606135_195606234_195680031_195681051_195683698_195683907_195706615_195706786_195708655_195708845_195713432_195713554_195716636_195717006_195718251_195718333_195728158_195728350_195734882
transcript_121463.known	chr2	+	5222	10	FSM	ENSG00000196950.14	ENST00000359634.10	5222	10	0	0	0	0	multi-exon	FALSE	canonical	3	889	junction_1	63.2410633905331	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCCAGTGTGTTTTCTTT	195637549	True	NA	16	True	AATAAA	-20	NA	195657225	195737700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_195657282_195680031_195681051_195683698_195683907_195706615_195706786_195708655_195708845_195713432_195713554_195716636_195717006_195718251_195718333_195728158_195728350_195734882
transcript_121468.nnic	chr2	+	2949	9	NNC	ENSG00000196950.14	novel	5222	10	NA	NA	-14	7720	intron_retention	FALSE	canonical	2	17	junction_8	330.598486649591	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTGACCCATATCTCA	195637535	True	NA	NA	False	ATTAAA	-21	NA	195657211	195725103	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_195657282_195680031_195681051_195683698_195683907_195706615_195706786_195708655_195708845_195713432_195713554_195716636_195717006_195718251_195718333_195724381
transcript_12147.known	chr1	-	891	7	FSM	ENSG00000155366.17	ENST00000484280.6	891	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	245.89202689166	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTTCCCTCCTGCCCA	-112699999	True	NA	NA	False	NA	NA	NA	112707133	112701436	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_112701714_112702562_112702694_112702998_112703120_112703383_112703458_112703643_112703807_112705099_112705169_112707077
transcript_121473.nic	chr2	+	1671	5	ISM	ENSG00000196950.14	ENST00000359634.10	5222	10	-31	28858	-31	2166	5prime_fragment	FALSE	canonical	3	889	junction_1	78.582758923316	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAAGTATTTTTTATTTA	195637518	True	NA	NA	False	NA	NA	NA	195657194	195708842	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_195657282_195680031_195681051_195683698_195683907_195706615_195706786_195708655
transcript_121474.nnic	chr2	+	427	3	NNC	ENSG00000196950.14	novel	593	3	NA	NA	10306	67	at_least_one_novel_splicesite	FALSE	canonical	3	203	junction_2	6	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTATATTGAAAAACTTTT	195582500	True	NA	NA	False	AATGAA	-7	NA	195586282	195680225	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_195586418_195606135_195606234_195680031
transcript_121475.nnic	chr2	+	934	3	NNC	ENSG00000196950.14	novel	2009	6	NA	NA	10306	299	at_least_one_novel_splicesite	FALSE	canonical	3	203	junction_2	6	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAGAGGAAGAAAAAAGG	195582500	True	NA	40	True	AATAAA	-34	NA	195586282	195680732	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_195586418_195606135_195606234_195680031
transcript_121477.nic	chr2	+	355	2	ISM	ENSG00000196950.14	ENST00000430412.5	4478	11	-7	57477	-7	67	5prime_fragment	FALSE	canonical	3	889	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTATATTGAAAAACTTTT	195637444	True	NA	NA	False	AATGAA	-7	NA	195657120	195680225	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_195657282_195680031
transcript_121478.nic	chr2	+	912	2	ISM	ENSG00000196950.14	ENST00000430412.5	4478	11	-57	56970	-57	299	5prime_fragment	FALSE	canonical	3	889	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAGAGGAAGAAAAAAGG	195657029	False	NA	40	True	AATAAA	-34	NA	195657070	195680732	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_195657282_195680031
transcript_121479.known	chr2	-	5273	8	FSM	ENSG00000081320.11	ENST00000263955.9	5273	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	5.46976849116476	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAAATCTGAAAACAAGTA	-196170203	True	NA	NA	False	AATAAA	-17	NA	196171578	196133582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_196137730_196139619_196139800_196141248_196141298_196143559_196143687_196145910_196146056_196156438_196156652_196163261_196163428_196171332
transcript_121506.known	chr2	+	2113	7	FSM	ENSG00000144395.18	ENST00000471546.5	2113	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	27.5801861245835	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCACATTGTCTCATTTG	196637904	True	NA	NA	False	AATACA	-17	NA	196639631	196667934	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_196639779_196646340_196646505_196656632_196656854_196656957_196657137_196658791_196658861_196665566_196665684_196666718
transcript_121509.known	chr2	-	4261	18	FSM	ENSG00000119041.11	ENST00000263956.8	4261	18	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_8	26.4436464200034	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTAAGCTGCTCCTTGCT	-196795927	True	NA	-7	True	ATTAAA	-18	NA	196799683	196763034	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_196764686_196766564_196766718_196769914_196770040_196771747_196771939_196772915_196773154_196775115_196775252_196776009_196776112_196776426_196776630_196778895_196779068_196780558_196780663_196784856_196784930_196785440_196785589_196789203_196789370_196789878_196790071_196791336_196791461_196792955_196793153_196797796_196797909_196799509
transcript_12152.known	chr1	-	1028	6	FSM	ENSG00000155366.17	ENST00000369638.6	1028	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	254.019369340214	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCACTTTATACACTTCTG	-112700001	True	NA	NA	False	NA	NA	NA	112707135	112701274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_112701714_112702562_112702694_112702998_112703120_112703643_112703807_112705052_112705169_112707077
transcript_121522.nic	chr2	-	546	3	ISM	ENSG00000119041.11	ENST00000409364.3	1736	9	-86	12866	-20	0	5prime_fragment	FALSE	canonical	3	256	junction_1	2.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTTTACTTATTTTGG	NA	False	NA	NA	False	AAGAAA	-11	NA	196799745	196792954	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_196793153_196797796_196797909_196799509
transcript_121524.known	chr2	-	1736	9	FSM	ENSG00000119041.11	ENST00000409364.3	1736	9	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_7	17.0948639947792	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGGACATTGGCTGGTGA	-196795903	True	NA	NA	False	AATAAA	-17	NA	196799659	196780088	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_196780663_196784856_196784930_196785440_196785589_196789203_196789370_196789878_196790071_196791336_196791461_196792955_196793153_196797796_196797909_196799509
transcript_12153.known	chr1	-	888	6	FSM	ENSG00000155366.17	ENST00000369637.5	888	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	236.355156491243	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCCCCTTTGACCTTCCC	-112699991	True	NA	NA	False	NA	NA	NA	112707125	112701312	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_112701714_112702562_112702694_112702998_112703120_112703643_112703807_112705099_112705124_112707077
transcript_121531.nic	chr2	-	2547	20	NIC	ENSG00000197121.15	novel	11090	27	NA	NA	-34	17	combination_of_known_junctions	TRUE	canonical	1	1	junction_12	14.0730189190466	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACATATTACTTTCTACTA	-196923952	True	NA	NA	False	NA	NA	NA	196926779	196847458	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_196848038_196864986_196865081_196870940_196870980_196872440_196872550_196872959_196873027_196873527_196873580_196873684_196873759_196875745_196875822_196880075_196880154_196885423_196885476_196885833_196885881_196890827_196890912_196893139_196893246_196897130_196897198_196898316_196898370_196902584_196902743_196912881_196913054_196916417_196916594_196919996_196920151_196926469
transcript_121534.known	chr2	-	2443	20	FSM	ENSG00000197121.15	ENST00000409475.5	2443	20	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	13.8695944774723	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	-196923903	True	NA	NA	False	NA	NA	NA	196926730	196847475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_196848038_196870940_196870980_196872440_196872550_196872959_196873027_196873527_196873580_196873684_196873759_196875745_196875822_196880075_196880154_196885423_196885476_196885833_196885881_196890827_196890912_196892345_196892402_196893139_196893246_196897130_196897198_196898316_196898370_196902584_196902743_196912881_196913054_196916417_196916594_196919996_196920151_196926469
transcript_12154.known	chr1	-	1026	6	FSM	ENSG00000155366.17	ENST00000369632.6	1026	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	236.029659153251	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCCCCTCCCTTCACAG	-112699945	True	NA	NA	False	GGGGCT	-35	NA	112707079	112701519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_112701714_112702562_112702694_112702998_112703120_112703643_112703807_112705099_112705169_112706731
transcript_121549.known	chr2	-	9283	25	FSM	ENSG00000115524.17	ENST00000652026.1	9283	25	0	0	0	0	multi-exon	TRUE	canonical	3	33	junction_21	411.929502379419	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGCAACTGTATATTTT	-197398998	True	NA	NA	False	AAAAAG	-15	NA	197435047	197388514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_197392462_197392971_197393189_197396055_197396329_197397984_197398117_197398460_197398582_197400054_197400167_197400251_197400435_197400714_197400937_197401399_197401526_197401741_197401889_197401984_197402131_197402555_197402827_197402948_197403036_197403584_197403765_197405075_197405178_197405274_197405473_197407997_197408120_197408368_197408582_197409769_197410008_197416740_197416912_197418508_197418589_197418895_197420543_197421028_197421134_197423807_197423975_197434971
transcript_12155.known	chr1	-	866	6	FSM	ENSG00000155366.17	ENST00000425265.6	866	6	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_5	234.405631331673	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCCCATTCTCTGAGATC	-112705782	False	NA	NA	False	NA	NA	NA	112707056	112701555	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_112701714_112702562_112702694_112702998_112703120_112703643_112703807_112705099_112705169_112706832
transcript_121550.known	chr2	-	6463	25	FSM	ENSG00000115524.17	ENST00000335508.11	6463	25	0	0	0	0	multi-exon	TRUE	canonical	3	1392	junction_21	209.637170023724	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTAGTAGACCAATTTTT	-197398979	True	NA	NA	False	AATAAA	-17	NA	197435028	197389783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_197392462_197392971_197393189_197396055_197396329_197397984_197398117_197398460_197398582_197400054_197400167_197400251_197400435_197400714_197400937_197401399_197401526_197401741_197401889_197401984_197402131_197402555_197402827_197402948_197403036_197403584_197403765_197405075_197405178_197405274_197405473_197407997_197408120_197408368_197408582_197409769_197410008_197416740_197416912_197418508_197418589_197420427_197420543_197421028_197421134_197423807_197423975_197434971
transcript_12156.known	chr1	-	1117	6	FSM	ENSG00000155366.17	ENST00000339083.12	1117	6	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_5	212.039053006752	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGGCAGCTTTCGGT	-112699993	True	NA	-35	True	AATAAA	-16	NA	112707127	112701130	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_112701714_112702562_112702694_112702998_112703120_112703643_112703807_112705099_112705169_112707077
transcript_121567.nic	chr2	-	2417	16	ISM	ENSG00000115524.17	ENST00000335508.11	6463	25	-29	11969	-10	269	5prime_fragment	FALSE	canonical	3	1392	junction_12	148.28866743244	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGCTGAAGGTAATTATT	-197399008	True	NA	NA	False	AATGAA	-6	NA	197435057	197401752	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_197401889_197401984_197402131_197402555_197402827_197402948_197403036_197403584_197403765_197405075_197405178_197405274_197405473_197407997_197408120_197408368_197408582_197409769_197410008_197416740_197416912_197418508_197418589_197420427_197420543_197421028_197421134_197423807_197423975_197434971
transcript_121574.nic	chr2	-	1634	11	ISM	ENSG00000115524.17	ENST00000335508.11	6463	25	-116	15342	-65	2810	5prime_fragment	FALSE	canonical	3	1392	junction_7	158.378312909312	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGAAGTTGCTTTTAAAA	NA	False	NA	17	True	AAAAAG	-10	NA	197435144	197405125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_197405178_197405274_197405473_197407997_197408120_197408368_197408582_197409769_197410008_197416740_197416912_197418508_197418589_197420427_197420543_197421028_197421134_197423807_197423975_197434971
transcript_121577.nic	chr2	-	3380	10	ISM	ENSG00000115524.17	ENST00000470268.2	8308	24	-7	15334	-4	2810	5prime_fragment	FALSE	canonical	3	1572	junction_5	118.353519405025	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGAAGTTGCTTTTAAAA	-197399002	True	NA	17	True	AAAAAG	-10	NA	197435051	197405125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_197405178_197405274_197405473_197407997_197408120_197408368_197408582_197409769_197410008_197416740_197416912_197418508_197420543_197421028_197421134_197423807_197423975_197434971
transcript_121592.known	chr2	+	2239	5	FSM	ENSG00000115520.9	ENST00000263960.7	2112	5	-129	2	-70	-2	multi-exon	FALSE	canonical	3	287	junction_2	27.1477439209965	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGATCTCCTGTCCTCCT	197449589	True	NA	NA	False	AATATA	-29	NA	197453422	197475308	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_197453665_197459931_197460082_197462538_197462732_197470069_197470172_197473756
transcript_121596.known	chr2	+	879	4	FSM	ENSG00000115520.9	ENST00000409398.5	879	4	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	145.22013940528	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATTGCTAGAATACTGGC	197449659	True	NA	NA	False	NA	NA	NA	197453492	197474168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_197453665_197462538_197462732_197470069_197470172_197473756
transcript_121599.known	chr2	-	2245	12	FSM	ENSG00000144381.18	ENST00000388968.8	2245	12	0	0	0	0	multi-exon	FALSE	canonical	1	3336	junction_7	2156.01373828402	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTGTTAGCATTTCCA	-197466382	True	NA	NA	False	AATAAA	-18	NA	197499840	197486583	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197499781
transcript_12160.known	chr1	-	1355	5	FSM	ENSG00000155366.17	ENST00000369642.7	1355	5	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_4	96.5307593464384	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGGCAGCTTTCGGT	-112706160	False	NA	-35	True	AATAAA	-16	NA	112707434	112701130	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_112701714_112702562_112702694_112702998_112703120_112703643_112703807_112707077
transcript_121600.known	chr2	-	2407	12	FSM	ENSG00000144381.18	ENST00000452200.6	2407	12	0	0	0	0	multi-exon	FALSE	canonical	1	318	junction_11	3299.24565633213	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTGTGTTAGCATTTC	-197500192	False	161	NA	False	AATAAA	-16	NA	197500221	197486585	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197499998
transcript_121601.known	chr2	-	2299	12	FSM	ENSG00000144381.18	ENST00000345042.6	2299	12	0	0	0	0	multi-exon	FALSE	canonical	1	239	junction_11	3317.13581520699	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTGTGTTAGCATTTC	-197500245	False	NA	NA	False	AATAAA	-16	NA	197500274	197486585	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197500159
transcript_121609.known	chr2	-	2413	13	FSM	ENSG00000144381.18	ENST00000678621.1	2413	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3831.99954603773	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTGTGTTAGCATTTC	-197466460	True	NA	NA	False	AATAAA	-16	NA	197499918	197486585	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_197487199_197487287_197487380_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197499781
transcript_121614.known	chr2	+	890	9	FSM	ENSG00000270757.1	ENST00000604458.1	890	9	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_2	4492.53280455469	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCATATTATAGCTTCTTT	197343053	True	NA	NA	False	NA	NA	NA	197500412	197550726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_197500440_197501073_197501239_197523623_197523687_197535529_197535631_197540110_197540154_197540350_197540438_197548335_197548416_197550274_197550387_197550514
transcript_121621.known	chr2	+	3752	8	FSM	ENSG00000115540.15	ENST00000323303.9	3752	8	0	0	0	0	multi-exon	FALSE	canonical	3	1346	junction_1	125.478350031113	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTCAAGCATCTCATTG	197504321	True	NA	15	True	AGTAAA	-16	NA	197516065	197553699	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_197516147_197523623_197523687_197535529_197535631_197540110_197540154_197540350_197540438_197548335_197548416_197550274_197550387_197550514
transcript_121623.known	chr2	+	1447	8	FSM	ENSG00000115540.15	ENST00000409360.1	1447	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	551.618768087275	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTACATACAGGATGATC	197504415	False	NA	NA	False	CATAAA	-44	NA	197516159	197551279	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_197516356_197523623_197523687_197535529_197535631_197540110_197540154_197540350_197540438_197548335_197548416_197550274_197550387_197550514
transcript_121626.known	chr2	+	1198	7	FSM	ENSG00000115540.15	ENST00000417097.5	1198	7	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	580.737079542503	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTACCGTTCTGCAACA	197504329	True	NA	NA	False	CATAAA	-19	NA	197516073	197551254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_197516147_197523623_197523687_197540110_197540154_197540350_197540438_197548335_197548416_197550274_197550387_197550514
transcript_121628.known	chr2	+	1021	7	FSM	ENSG00000115540.15	ENST00000448447.6	1021	7	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_1	491.718641320646	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGTAGAAATGTTTTCTA	197504302	True	NA	121	True	NA	NA	NA	197516046	197551012	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_197516147_197535529_197535631_197540110_197540154_197540350_197540438_197548335_197548416_197550274_197550387_197550514
transcript_121638.known	chr2	+	557	4	FSM	ENSG00000115541.11	ENST00000233893.10	557	4	0	0	0	0	multi-exon	FALSE	canonical	3	14828	junction_1	262.339474726927	1875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTTAATCTTTAGTTATT	197343019	True	NA	17	True	AATAAA	-14	NA	197500378	197503449	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_197500440_197501073_197501239_197503038_197503129_197503208
transcript_12164.known	chr1	+	1451	6	FSM	ENSG00000184599.14	ENST00000361886.4	1451	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.49666295470958	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGCACAGGTATGGGC	112718859	True	NA	NA	False	AATAAA	-19	NA	112718904	112727235	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_112719300_112720576_112720635_112722232_112722349_112723015_112723166_112724012_112724138_112726628
transcript_121642.known	chr2	+	570	3	FSM	ENSG00000115541.11	ENST00000409468.1	570	3	0	0	0	0	multi-exon	FALSE	canonical	3	14828	junction_1	321	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAGTGTCTCCAAAATTG	197343019	True	NA	27	True	AATAAA	-19	NA	197500378	197503382	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_197500440_197501073_197501239_197503038
transcript_121645.known	chr2	+	478	3	FSM	ENSG00000115541.11	ENST00000409729.1	478	3	0	0	0	0	multi-exon	FALSE	canonical	3	1368	junction_1	6902.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTCCACTGAAGTTCTG	197493767	True	NA	-59	True	NA	NA	NA	197500139	197503296	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_197500440_197503038_197503129_197503208
transcript_121647.known	chr2	+	569	2	FSM	ENSG00000115541.11	ENST00000473395.1	569	2	0	0	0	0	multi-exon	FALSE	canonical	3	14828	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAGTTCAAGACCAGCCT	197342989	True	NA	NA	False	NA	NA	NA	197500348	197501551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_197500440_197501073
transcript_121656.nnic	chr2	+	763	3	Antisense	novelGene_ENSG00000162944.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	27	junction_2	35	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTGGTAGTCTCTTC	197577356	True	NA	21	True	ATTAAA	-22	NA	197578670	197587688	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr2_+_197578923_197580468_197580643_197587351
transcript_121659.nnic	chr2	+	595	3	Antisense	novelGene_ENSG00000162944.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	22	junction_2	37.5	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTGTGCAACTTGGTTC	197577356	True	NA	10	True	AATAAA	-24	NA	197578670	197614450	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr2_+_197578923_197580468_197580643_197614281
transcript_121661.known	chr2	+	3027	1	FSM	ENSG00000247626.5	ENST00000282276.8	3027	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGATCTGTTCTGTTGCA	197703852	True	NA	13	True	ATTAAA	-25	NA	197705368	197708395	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_197705400_197708400
transcript_121662.known	chr2	-	5568	11	FSM	ENSG00000119042.17	ENST00000417098.6	5568	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	5.33385414123783	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGACTTTGTTTGTCAGTT	-199457924	False	388	-20	True	AATAAA	-14	NA	199457939	199269504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_199272673_199308759_199308958_199323802_199323959_199328697_199328911_199348700_199349174_199368604_199368708_199380363_199380488_199381693_199381821_199433337_199433515_199455868_199456097_199457338
transcript_121667.known	chr2	+	1663	1	FSM	ENSG00000225953.4	ENST00000668832.1	1663	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTGGTTTCGTTTT	199459697	True	NA	7	True	AATAAA	-20	NA	199459759	199461422	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_199459800_199461400
transcript_12167.nic	chr1	-	768	3	FSM	ENSG00000215866.9	ENST00000691250.1	700	3	-68	0	-68	0	multi-exon	FALSE	canonical	3	676	junction_1	218	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTGGTGGTCTCTTCA	-112821385	True	NA	0	True	AATAAA	-23	NA	112825809	112820169	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_112820539_112823652_112823755_112825512
transcript_121675.known	chr2	-	2068	4	FSM	ENSG00000226124.9	ENST00000622774.2	2068	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	11.115554667022	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATTCAACATTTTGTCA	-199851032	True	NA	NA	False	AATAAA	-19	NA	199851192	199818360	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_199819758_199846074_199846171_199848847_199848970_199850739
transcript_121676.known	chr2	-	1267	3	FSM	ENSG00000232732.11	ENST00000653798.1	1267	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTCATGCAACCTGATT	-199911060	True	NA	NA	False	AATAAA	-26	NA	199911106	199878495	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_199879611_199909102_199909173_199911024
transcript_121679.known	chr2	-	5123	8	FSM	ENSG00000162971.11	ENST00000354611.9	5123	8	0	0	0	0	multi-exon	TRUE	canonical	3	62	junction_6	31.184768652635	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGGGACTTTGTATTG	-199954065	True	NA	-1	True	ATTAAA	-15	NA	199955491	199928912	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_199933324_199935930_199936048_199936404_199936493_199938932_199939071_199940088_199940134_199943764_199943835_199948317_199948473_199955392
transcript_121680.known	chr2	-	4287	8	FSM	ENSG00000162971.11	ENST00000483328.5	4287	8	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_6	27.9985422361047	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATTATATGCAGAGCT	-199955722	False	NA	NA	False	NA	NA	NA	199955736	199929974	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_199933324_199935930_199936048_199936404_199936493_199938932_199939071_199940088_199940134_199943764_199943835_199948336_199948473_199955392
transcript_121695.known	chr2	-	2042	7	FSM	ENSG00000162971.11	ENST00000441832.1	2042	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	55.5517776493246	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGTGAGCCATTGTGTGT	-199954077	True	NA	-11	True	AATAAA	-28	NA	199955503	199931898	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_199933324_199935930_199936048_199938932_199939071_199940088_199940134_199943764_199943835_199948336_199948473_199955392
transcript_121699.known	chr2	+	3691	2	FSM	ENSG00000178074.6	ENST00000319974.6	3691	2	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTGGATGTGCTTTA	199908203	True	NA	17	True	ATTAAA	-18	NA	199911292	199928273	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_199911772_199925061
transcript_1217.known	chr1	+	400	2	FSM	ENSG00000272004.1	ENST00000607013.1	400	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTCTCATCTTTCCAG	1659244	False	NA	4	True	ATTAAA	-22	NA	1659324	1662602	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1659453_1662330
transcript_12170.known	chr1	-	1222	3	FSM	ENSG00000215866.9	ENST00000667852.1	1222	3	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_1	344.5	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGAACCTGTTTGGTGG	NA	False	NA	-8	True	AATAAA	-15	NA	112826268	112820177	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_112820542_112823652_112823755_112825512
transcript_121701.known	chr2	+	1386	5	FSM	ENSG00000162972.11	ENST00000392290.6	1399	5	21	-8	21	8	multi-exon	FALSE	canonical	3	314	junction_3	22.3313120975907	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTATATATTTTTTAA	199955456	False	NA	17	True	AATAAA	-28	NA	199955602	199964125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_199956249_199959267_199959340_199959753_199959881_199961780_199961929_199963732
transcript_121706.known	chr2	+	6156	13	FSM	ENSG00000196141.14	ENST00000358677.9	6156	13	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_1	347.525738455282	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTTTATTCTTAGTT	200305956	True	NA	NA	False	AATAAA	-12	NA	200305985	200482263	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_200306161_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200439121_200439329_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200473053_200477635
transcript_121707.known	chr2	+	2648	13	FSM	ENSG00000196141.14	ENST00000409718.5	2648	13	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	347.525738455282	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGCTAGTTTCTTTTA	200305839	False	NA	15	True	ATTAAA	-16	NA	200305892	200478530	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_200306293_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200439121_200439329_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200473053_200477635
transcript_121709.known	chr2	+	2698	13	FSM	ENSG00000196141.14	ENST00000409988.7	2698	13	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	315.750120964171	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTGGCTAGTTTCTTTT	200306126	False	NA	14	True	ATTAAA	-15	NA	200306150	200478529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_200306602_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200439121_200439329_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200473053_200477635
transcript_121713.known	chr2	+	6212	13	FSM	ENSG00000196141.14	ENST00000409140.8	6212	13	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_6	254.585611009997	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTATTCTTAGTTT	200292922	True	NA	NA	False	AATAAA	-13	NA	200306692	200482264	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_200306923_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200439121_200439329_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200473053_200477635
transcript_121717.nic	chr2	+	2391	12	NIC	ENSG00000196141.14	novel	2119	12	NA	NA	33	0	combination_of_known_junctions	FALSE	canonical	3	105	junction_11	337.051606024904	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGCTAGTTTCTTTTA	200306105	False	NA	15	True	ATTAAA	-16	NA	200306191	200478530	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_200306602_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200472993_200477635
transcript_121718.known	chr2	+	2119	12	FSM	ENSG00000196141.14	ENST00000360760.9	2119	12	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	244.737099627098	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGCTAGTTTCTTTTA	200306297	False	NA	15	True	ATTAAA	-16	NA	200306523	200478530	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_200306602_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200473053_200477635
transcript_12172.nnic	chr1	-	816	3	NNC	ENSG00000215866.9	novel	1430	4	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	202	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACCTGTTTGGTGGTCTCT	-112821341	True	NA	-3	True	AATAAA	-20	NA	112825765	112820172	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_112820542_112823652_112823847_112825512
transcript_121721.nic	chr2	+	2249	12	NIC	ENSG00000196141.14	novel	6212	13	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	731	junction_1	117.768718573228	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGCTAGTTTCTTTTA	200292944	True	NA	15	True	ATTAAA	-16	NA	200306714	200478530	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_200306923_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200473053_200477635
transcript_12173.known	chr1	+	490	2	FSM	ENSG00000224167.3	ENST00000422022.1	490	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGCTGCTAGTAATATGA	112850065	False	NA	3	True	AATAAA	-12	NA	112850075	112877867	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_112850428_112877729
transcript_121737.nic	chr2	+	795	5	ISM	ENSG00000196141.14	ENST00000409988.7	2698	13	-78	62105	-78	-2909	5prime_fragment	FALSE	canonical	3	201	junction_1	367.008514887598	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGTAAGATTAATATTGA	200305988	True	NA	29	True	NA	NA	NA	200306072	200416424	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_200306602_200329430_200329481_200389222_200389284_200412310_200412420_200416378
transcript_12174.nnic	chr1	-	622	2	NIC	ENSG00000215866.9	novel	700	3	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	2	29	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTGGTGGTCTCTTCA	-112821341	True	NA	0	True	AATAAA	-23	NA	112825765	112820169	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_112820539_112825512
transcript_121753.known	chr2	-	2939	7	FSM	ENSG00000155729.13	ENST00000359878.8	2939	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	2.21735578260835	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTATTTTCTGTGTCTGT	-200509672	True	NA	NA	False	AATAAA	-16	NA	200510068	200488957	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_200490617_200493171_200493275_200497752_200497848_200498890_200499085_200504747_200504960_200506856_200507092_200509627
transcript_121754.known	chr2	-	2556	7	FSM	ENSG00000155729.13	ENST00000409157.5	2556	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_6	9.48097510221859	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTATTTTCTGTGTCTGT	-200509672	True	NA	NA	False	AATAAA	-16	NA	200510068	200488957	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_200490617_200493171_200493275_200497752_200497848_200498890_200499085_200504747_200504960_200506856_200507092_200510010
transcript_121757.known	chr2	+	640	4	FSM	ENSG00000163535.18	ENST00000418045.5	640	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	100.886074361133	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTGAATTTTGAGAACACA	NA	False	NA	NA	False	AAAAAG	-10	NA	200510007	200535124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_200510267_200526135_200526253_200532973_200533109_200534995
transcript_121758.known	chr2	+	4928	35	FSM	ENSG00000138356.14	ENST00000374700.7	4928	35	0	0	0	0	multi-exon	TRUE	canonical	1	7	junction_7	4.01855557723613	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTGAGTAGATGTATCT	200585907	True	NA	5	True	AATAAA	-18	NA	200586013	200671495	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_200586154_200593145_200593204_200595271_200595369_200597396_200597506_200599619_200599747_200602283_200602346_200603266_200603357_200604016_200604098_200604695_200604841_200605535_200605629_200608983_200609136_200609320_200609415_200611383_200611494_200612608_200612794_200613803_200613967_200615970_200616064_200620649_200620820_200621119_200621247_200623860_200623984_200627352_200627450_200634790_200634916_200636910_200637045_200638214_200638303_200641097_200641185_200642609_200642802_200650973_200651202_200656841_200656938_200659164_200659294_200659994_200660070_200661578_200661632_200662854_200662970_200666686_200666753_200668614_200668804_200669574_200669743_200670628
transcript_121764.nic	chr2	+	3115	12	NIC	ENSG00000082153.18	novel	1075	9	NA	NA	-7	596	combination_of_known_junctions	FALSE	canonical	3	372	junction_1	439.615590907096	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGCTTTATACATCAGTC	200806979	True	NA	-3	True	AATAAA	-15	NA	200811538	200823834	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_200811728_200813207_200813282_200815340_200815518_200815666_200815762_200816324_200816391_200817105_200817242_200817973_200818084_200818222_200818394_200818754_200818902_200819981_200820121_200821182_200821306_200822146
transcript_121768.known	chr2	+	6511	12	FSM	ENSG00000082153.18	ENST00000409600.6	6511	12	0	0	0	0	multi-exon	FALSE	canonical	3	1532	junction_1	126.803224924446	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGACTGTTCAGTTGGT	200796162	True	NA	24	True	AATAAA	-34	NA	200811909	200827338	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_200811991_200813207_200813282_200815340_200815518_200815666_200815762_200816324_200816391_200817105_200817242_200817973_200818084_200818222_200818394_200818754_200818902_200819981_200820121_200821182_200821306_200822146
transcript_12177.known	chr1	-	3849	6	FSM	ENSG00000155380.13	ENST00000458229.6	3849	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	605.338120392232	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTATAAATAACTTTTTCC	-112942786	True	NA	-22	True	AATAAA	-9	NA	112956198	112911855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_112914166_112917177_112918045_112921989_112922134_112929091_112929353_112955275_112955379_112956034
transcript_121776.known	chr2	+	1473	12	FSM	ENSG00000082153.18	ENST00000452790.6	1473	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	543.437619493711	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTTCTTACATCTTCCT	200812282	False	NA	NA	False	AGTAAA	-41	NA	200812355	200822243	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_200812494_200813207_200813282_200815340_200815518_200815666_200815762_200816324_200816391_200817105_200817242_200817973_200818084_200818222_200818394_200818754_200818902_200819981_200820121_200821182_200821306_200822146
transcript_121787.known	chr2	+	1075	9	FSM	ENSG00000082153.18	ENST00000410110.6	1075	9	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_1	494.117885099295	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCTGGTCAAGTGTAATG	200806986	True	NA	50	True	AAAACA	-28	NA	200811545	200818818	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_200811728_200813207_200813282_200815340_200815518_200815666_200815762_200816324_200816391_200817105_200817242_200817973_200818084_200818222_200818394_200818754
transcript_121800.known	chr2	+	265	2	FSM	ENSG00000082153.18	ENST00000460660.1	265	2	0	0	0	0	multi-exon	FALSE	canonical	3	1532	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCGTTGACTGCCATTT	200796175	True	NA	NA	False	ACTAAA	-34	NA	200811922	200813404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_200811991_200813207
transcript_121801.known	chr2	-	2026	13	FSM	ENSG00000013441.17	ENST00000434813.3	2026	13	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_12	36.6208046516367	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTTATTTTGTTTGGG	-200863055	False	NA	-130	True	NA	NA	NA	200864561	200853195	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_200853450_200853902_200853994_200854615_200854696_200855003_200855087_200856681_200856812_200856890_200856986_200857717_200857885_200857972_200858090_200859679_200859747_200860124_200860216_200861237_200861467_200861701_200861863_200864100
transcript_121802.known	chr2	-	1847	13	FSM	ENSG00000013441.17	ENST00000321356.9	1847	13	0	0	0	0	multi-exon	TRUE	canonical	2	24	junction_9	32.4665426075659	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTTTTTGGAGACTTC	-200863152	True	NA	57	True	ATTAAA	-14	NA	200864658	200853008	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_200853450_200853902_200853994_200854615_200854696_200855003_200855087_200856681_200856812_200856890_200856986_200857717_200857885_200857972_200858090_200859679_200859747_200860124_200860216_200861237_200861467_200861701_200861863_200864563
transcript_121805.known	chr2	-	1682	12	FSM	ENSG00000013441.17	ENST00000432425.5	1682	12	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_11	23.2514106921183	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGATATGTATCTGAACAG	-200863150	True	NA	-15	True	AATAAA	-18	NA	200864656	200853080	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_200853450_200853902_200853994_200854615_200854696_200855003_200855087_200856681_200856812_200856890_200856986_200857717_200857885_200857972_200858090_200859679_200859747_200861237_200861467_200861701_200861863_200864563
transcript_121806.known	chr2	-	3208	11	FSM	ENSG00000013441.17	ENST00000473565.5	3208	11	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_10	22.277567192133	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGATATGTATCTGAACAG	-200863185	True	NA	-15	True	AATAAA	-18	NA	200864691	200853080	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_200853450_200853902_200853994_200854615_200854696_200855003_200855087_200856681_200856812_200856890_200856986_200857717_200857885_200857972_200858090_200859679_200861467_200861701_200861863_200864563
transcript_121807.nnic	chr2	-	1567	11	NIC	ENSG00000013441.17	novel	1682	12	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_6	34.7345649173845	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGATATGTATCTGAACAG	-200863202	True	NA	-15	True	AATAAA	-18	NA	200864708	200853080	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_200853450_200853902_200853994_200854615_200854696_200855003_200855087_200856681_200856812_200856890_200856986_200857972_200858090_200859679_200859747_200861237_200861467_200861701_200861863_200864563
transcript_12181.known	chr1	-	3753	5	FSM	ENSG00000155380.13	ENST00000369626.8	3753	5	0	0	0	0	multi-exon	FALSE	canonical	3	1098	junction_2	91.3492610807553	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTTTTCCTCATCTTTA	-112942784	True	NA	-13	True	AATAAA	-18	NA	112956196	112911846	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_112914166_112917177_112918045_112921989_112922134_112929091_112929353_112956034
transcript_121814.known	chr2	-	1166	7	FSM	ENSG00000240344.9	ENST00000392283.9	1166	7	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_6	49.6635905087643	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCATCTCCAAGATATC	-200889052	False	NA	55	True	AATGAA	-18	NA	200889077	200870906	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_200871522_200876918_200877038_200881420_200881489_200882341_200882436_200885697_200885773_200887612_200887686_200888955
transcript_121815.nic	chr2	-	1052	7	NIC	ENSG00000240344.9	novel	1166	7	NA	NA	-50	-53	combination_of_known_junctions	FALSE	canonical	3	87	junction_6	114.948780864445	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAATCGTAGGACAAATTA	NA	False	NA	16	True	AATAAA	-21	NA	200889353	200871008	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_200871522_200876918_200877038_200881420_200881489_200882341_200882436_200885697_200885773_200887612_200887686_200889243
transcript_121817.known	chr2	-	1370	7	FSM	ENSG00000240344.9	ENST00000286175.12	1370	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	159.45288401977	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCATCTCCAAGATATC	-200889244	False	NA	55	True	AATGAA	-18	NA	200889269	200870906	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_200871522_200876918_200877038_200881420_200881489_200885261_200885368_200885697_200885773_200887612_200887686_200888955
transcript_121820.known	chr2	-	1222	6	FSM	ENSG00000240344.9	ENST00000465823.5	1222	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	141.903629270008	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTATAAGGTATATATGA	-200889251	False	NA	6	True	ATTAAA	-28	NA	200889276	200870955	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_200871522_200876918_200877038_200881420_200881489_200885697_200885773_200887612_200887686_200888955
transcript_121826.known	chr2	+	1679	8	FSM	ENSG00000196290.17	ENST00000409357.5	1679	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	210.711525405649	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGATTGAATAAAATCTG	200881413	True	NA	-8	True	ATTAAA	-27	NA	200889414	200903896	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_200889653_200890522_200890586_200891917_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
transcript_121828.nnic	chr2	+	1456	7	NIC	ENSG00000196290.17	novel	1689	7	NA	NA	16	0	combination_of_known_splicesites	FALSE	canonical	3	60	junction_1	156.552884213468	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTTGGAAGGAGCTCA	200881341	True	NA	21	True	AATAAA	-15	NA	200889342	200903925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_200889392_200891917_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
transcript_121829.nic	chr2	+	1392	7	NIC	ENSG00000196290.17	novel	1689	7	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	159.814128147531	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTTGGAAGGAGCTCA	200881354	True	NA	21	True	AATAAA	-15	NA	200889355	200903925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_200889392_200891968_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
transcript_12183.known	chr1	-	4374	5	FSM	ENSG00000155380.13	ENST00000538576.5	4374	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	536.250582750266	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATAACTTTTTCCTCAT	-112956019	False	NA	-18	True	AATAAA	-13	NA	112956063	112911851	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_112914166_112917177_112918045_112921989_112922134_112929091_112929353_112955275
transcript_121830.nic	chr2	+	1613	7	NIC	ENSG00000196290.17	novel	1689	7	NA	NA	-1	0	intron_retention	FALSE	canonical	3	6	junction_1	176.172658365467	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTTGGAAGGAGCTCA	200881366	True	NA	21	True	AATAAA	-15	NA	200889367	200903925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_200889392_200891735_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
transcript_121831.known	chr2	+	1626	7	FSM	ENSG00000196290.17	ENST00000359683.8	1626	7	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	144.991666427189	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAAGGAGCTCAAGTGA	200881386	True	NA	26	True	AATAAA	-20	NA	200889387	200903930	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_200889653_200891968_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
transcript_121832.nic	chr2	+	2620	7	NIC	ENSG00000196290.17	novel	1689	7	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	173.62283515969	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTTGGAAGGAGCTCA	200881371	True	NA	21	True	AATAAA	-15	NA	200889372	200903925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_200890586_200891917_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
transcript_121835.known	chr2	+	1689	7	FSM	ENSG00000196290.17	ENST00000409020.6	1689	7	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	137.797456031992	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTTGGAAGGAGCTCA	200881369	True	NA	21	True	AATAAA	-15	NA	200889370	200903925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_200889653_200891917_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
transcript_121836.nnic	chr2	+	1852	7	NIC	ENSG00000196290.17	novel	1689	7	NA	NA	2	0	intron_retention	FALSE	canonical	3	10	junction_1	174.715403505879	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTTGGAAGGAGCTCA	200881388	True	NA	21	True	AATAAA	-15	NA	200889389	200903925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_200889653_200891735_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
transcript_121845.known	chr2	+	1269	5	FSM	ENSG00000196290.17	ENST00000409588.1	1269	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	192.241222166319	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTTGGAAGGAGCTCA	200883915	False	NA	21	True	AATAAA	-15	NA	200891916	200903925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_200892380_200893245_200893409_200895263_200895391_200899384_200899469_200903493
transcript_121852.known	chr2	-	4288	18	FSM	ENSG00000115942.9	ENST00000234296.7	4288	18	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_2	22.2791351176767	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTGGTAGTGCTGGTTT	-200954813	True	NA	97	True	AATAAA	-31	NA	200963660	200908976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_200911388_200913294_200913414_200913930_200913993_200920221_200920394_200920992_200921140_200925835_200925933_200926767_200926901_200931338_200931449_200933875_200933975_200935698_200935893_200937905_200937967_200941247_200941280_200942684_200942778_200949553_200949644_200957400_200957545_200958029_200958134_200959391_200959441_200963489
transcript_121871.known	chr2	-	9333	12	FSM	ENSG00000155744.10	ENST00000418596.7	9333	12	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_7	4.71151218903634	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCCTGAGTTGATTTTAT	-201070561	True	NA	1	True	TATAAA	-30	NA	201071669	200973717	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_200981872_200988261_200988422_200992280_200992369_200992886_200993004_200997444_200997541_201008972_201009089_201011391_201011473_201016990_201017171_201022830_201022933_201023958_201024040_201045495_201045594_201071609
transcript_121876.nic	chr2	-	973	9	ISM	ENSG00000115942.9	ENST00000234296.7	4288	18	-55	26742	-35	-1843	5prime_fragment	FALSE	canonical	3	214	junction_6	17.2391270080593	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAATGAAAAGAGATAAAACA	NA	False	NA	NA	False	AATAGA	-41	NA	200963715	200935718	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_200935893_200937905_200937967_200941247_200941280_200942684_200942778_200949553_200949644_200957400_200957545_200958029_200958134_200959391_200959441_200963489
transcript_121879.known	chr2	+	547	4	FSM	ENSG00000119013.10	ENST00000454214.1	547	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	846.100992133261	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTTTTGTCATTCTTAA	201053199	True	NA	10	True	ATTAAA	-18	NA	201072029	201085750	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_201072060_201072278_201072362_201078880_201079023_201085458
transcript_121883.known	chr2	+	493	3	FSM	ENSG00000119013.10	ENST00000237889.9	493	3	0	0	0	0	multi-exon	FALSE	canonical	3	1440	junction_1	208.5	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTTTTGTCATTCTTAA	201053170	True	NA	10	True	ATTAAA	-18	NA	201072000	201085750	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_201072060_201078880_201079023_201085458
transcript_121885.known	chr2	+	1548	3	FSM	ENSG00000119013.10	ENST00000682325.1	1548	3	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	850	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATATATGCCAATCTG	201053193	True	NA	-6	True	ATTAAA	-2	NA	201072023	201085734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_201073154_201078880_201079023_201085458
transcript_121886.known	chr2	+	555	4	FSM	ENSG00000119013.10	ENST00000684175.1	555	4	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	840.041797901879	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTTTTGTCATTCTTAA	201053191	True	NA	10	True	ATTAAA	-18	NA	201072021	201085750	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_201072060_201073070_201073154_201078880_201079023_201085458
transcript_121887.known	chr2	+	739	3	FSM	ENSG00000119013.10	ENST00000684420.1	739	3	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	887	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAATCTGCTTTTGTCATT	201053221	True	NA	5	True	ATTAAA	-13	NA	201072051	201085745	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_201072362_201078880_201079023_201085458
transcript_121888.known	chr2	+	503	4	FSM	ENSG00000119013.10	ENST00000433898.5	503	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	851.509378822231	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAATCTGCTTTTGTCAT	201053177	True	NA	4	True	ATTAAA	-12	NA	201072007	201085744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_201072060_201072338_201072362_201078880_201079023_201085458
transcript_121893.known	chr2	+	14612	10	FSM	ENSG00000003402.21	ENST00000309955.8	14612	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_9	23.7112256583717	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCGTGGCTCATGCCTGT	201116019	True	NA	NA	False	ATTAAA	-20	NA	201116163	201176687	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_201116482_201129728_201130147_201133028_201133135_201135971_201136108_201140356_201140440_201145377_201145433_201149002_201149053_201149753_201149836_201160431_201160943_201163834
transcript_121896.known	chr2	+	2128	10	FSM	ENSG00000003402.21	ENST00000423241.6	2128	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_9	23.6929952663516	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTAGCTGGGTGTGGG	201118469	True	NA	NA	False	AGTAAA	-6	NA	201118490	201164110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_201118902_201129728_201130147_201133028_201133135_201135971_201136108_201140356_201140440_201145377_201145433_201149002_201149053_201149753_201149836_201160431_201160943_201163834
transcript_121899.known	chr2	+	1283	6	FSM	ENSG00000003402.21	ENST00000341222.10	1283	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	6.60302960768767	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATTTGTTTTTTTACT	201116022	True	NA	17	True	AATAAA	-17	NA	201116166	201141598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_201116482_201129728_201130147_201133028_201133135_201135971_201136108_201140356_201140440_201141373
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transcript_121980.known	chr2	+	4587	1	FSM	ENSG00000155760.3	ENST00000286201.3	4587	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	277	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACATTTATTTAGTTTAC	202020658	True	NA	6	True	AATAAA	-18	NA	202033854	202038441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_202033900_202038400
transcript_121983.known	chr2	-	1071	6	FSM	ENSG00000116030.17	ENST00000392245.5	1071	6	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	1922.20119654525	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTCTTACTGGATTTT	-202201202	True	NA	-17	True	AATAAA	-11	NA	202238599	202206186	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_202206804_202207252_202207322_202210734_202210807_202214356_202214435_202220031_202220107_202238439
transcript_121984.known	chr2	-	722	6	FSM	ENSG00000116030.17	ENST00000409627.6	722	6	0	0	0	0	multi-exon	TRUE	canonical	1	5	junction_4	2439.06421399684	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATCTGGTAATTTGAAT	-202201169	True	NA	NA	False	NA	NA	NA	202238566	202207141	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_202207322_202210734_202210807_202214356_202214435_202220031_202220107_202231542_202231733_202238439
transcript_121986.known	chr2	-	534	5	FSM	ENSG00000116030.17	ENST00000409205.5	534	5	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_3	1824.88525324197	1060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTACGTGTGCACAGA	-202201065	True	NA	NA	False	NA	NA	NA	202238462	202207030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_202207322_202210734_202210807_202214356_202214430_202220031_202220107_202238439
transcript_121988.known	chr2	-	831	4	FSM	ENSG00000116030.17	ENST00000392244.7	831	4	0	0	0	0	multi-exon	FALSE	canonical	3	1214	junction_3	1548.81230481797	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCAGGTTGAAGTCAAGA	-202201169	True	NA	NA	False	TTTAAA	-30	NA	202238566	202206767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_202207322_202210734_202210807_202214356_202214435_202238439
transcript_121989.known	chr2	-	761	4	FSM	ENSG00000116030.17	ENST00000409712.5	761	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	2411.02610705253	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAACTGAACTGTGGAAA	-202201179	True	NA	NA	False	NA	NA	NA	202238576	202206850	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_202207322_202214356_202214435_202220031_202220107_202238439
transcript_12199.known	chr1	+	1897	3	FSM	ENSG00000226419.8	ENST00000420168.2	1897	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	10.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATAGGTAGAGCTGGCCG	112956500	False	NA	NA	False	AAAACA	-3	NA	112956519	112969395	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_112956957_112960476_112960576_112968034
transcript_122.known	SIRV3	+	1083	8	FSM	SIRV3A	SIRV304	1083	8	0	0	0	0	multi-exon	FALSE	canonical	3	1354	junction_6	995.470804418181	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGTTAACGTCTCGTAAG	NA	False	NA	NA	False	NA	NA	NA	1963	8937	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV3_+_2006_4003_4081_4568_4780_6057_6334_7270_7367_7872_7989_8124_8208_8755
transcript_122003.known	chr2	+	1994	15	FSM	ENSG00000055044.11	ENST00000264279.10	1994	15	0	0	0	0	multi-exon	FALSE	canonical	3	1102	junction_3	125.403023756794	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAATTTTGTGATCTCTTT	202247426	True	NA	18	True	AATAAA	-19	NA	202265762	202303661	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_202265987_202275112_202275190_202277949_202278003_202282350_202282473_202284344_202284482_202287659_202287725_202290322_202290458_202291124_202291271_202292776_202292904_202295673_202295838_202297378_202297514_202297844_202297907_202300233_202300368_202302920_202303058_202303385
transcript_122007.nic	chr2	+	1714	14	ISM	ENSG00000055044.11	ENST00000264279.10	1994	15	-67	675	-40	-447	5prime_fragment	FALSE	canonical	3	1102	junction_3	114.682066302282	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGGTAAAAAGAAACACATT	202247359	True	NA	64	True	AAAAAG	-43	NA	202265695	202302986	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_202265987_202275112_202275190_202277949_202278003_202282350_202282473_202284344_202284482_202287659_202287725_202290322_202290458_202291124_202291271_202292776_202292904_202295673_202295838_202297378_202297514_202297844_202297907_202300233_202300368_202302920
transcript_122008.nic	chr2	+	1785	14	ISM	ENSG00000055044.11	ENST00000264279.10	1994	15	-67	604	-40	-376	5prime_fragment	FALSE	canonical	3	1102	junction_3	114.682066302282	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTTTGTTTTTAATTAT	202247359	True	NA	6	True	NA	NA	NA	202265695	202303057	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_202265987_202275112_202275190_202277949_202278003_202282350_202282473_202284344_202284482_202287659_202287725_202290322_202290458_202291124_202291271_202292776_202292904_202295673_202295838_202297378_202297514_202297844_202297907_202300233_202300368_202302920
transcript_122017.nic	chr2	+	1629	13	ISM	ENSG00000055044.11	ENST00000264279.10	1994	15	-67	3313	-40	2442	5prime_fragment	FALSE	canonical	3	1102	junction_3	108.698231611906	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAAGATTAAAGTTAAAGG	202247359	True	NA	NA	False	GATAAA	-34	NA	202265695	202300348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_202265987_202275112_202275190_202277949_202278003_202282350_202282473_202284344_202284482_202287659_202287725_202290322_202290458_202291124_202291271_202292776_202292904_202295673_202295838_202297378_202297514_202297844_202297907_202300233
transcript_122021.nic	chr2	+	1514	12	ISM	ENSG00000055044.11	ENST00000264279.10	1994	15	-67	5755	-40	0	5prime_fragment	FALSE	canonical	3	1102	junction_3	106.391293995404	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTACATTTAAGTGAGG	202247359	True	NA	30	True	AAAACA	-21	NA	202265695	202297906	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_202265987_202275112_202275190_202277949_202278003_202282350_202282473_202284344_202284482_202287659_202287725_202290322_202290458_202291124_202291271_202292776_202292904_202295673_202295838_202297378_202297514_202297844
transcript_122034.nic	chr2	+	468	4	ISM	ENSG00000055044.11	ENST00000472050.5	582	5	-69	2037	-40	-1981	5prime_fragment	FALSE	canonical	3	1102	junction_3	160.455601335697	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTCTGAAGAAAATAGTAAA	202247359	True	NA	NA	False	NA	NA	NA	202265695	202282397	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_202265987_202275112_202275190_202277949_202278003_202282350
transcript_122036.known	chr2	+	793	2	FSM	ENSG00000055044.11	ENST00000492740.5	793	2	0	0	0	0	multi-exon	FALSE	canonical	3	1495	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGACAGAGTCTTGTTC	202247428	True	NA	NA	False	NA	NA	NA	202265764	202275683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_202265987_202275112
transcript_122038.known	chr2	+	12068	13	FSM	ENSG00000204217.16	ENST00000374580.10	12068	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	5.25132258472938	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTAATTGTGTTTTTTTAT	202374742	True	NA	9	True	ATTAAA	-18	NA	202376326	202567749	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_202377551_202464808_202464980_202467518_202467690_202513718_202513830_202514887_202514980_202518821_202519053_202520086_202520202_202530793_202530955_202532584_202532733_202542310_202542448_202552715_202552889_202555251_202556532_202559695
transcript_122045.nic	chr2	+	2447	4	Fusion	ENSG00000289490.1_ENSG00000204217.16	novel	9683	12	NA	NA	-158	291	multi-exon	FALSE	canonical	1	2	junction_3	19.8158185969358	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATTAATGTAGAAGGC	202375477	True	NA	NA	False	AATAAA	-12	NA	202376168	202475430	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr2_+_202377551_202464808_202464980_202467518_202467690_202474707
transcript_122047.nic	chr2	+	2758	3	ISM	ENSG00000204217.16	ENST00000374580.10	12068	13	-826	99694	-826	-7084	5prime_fragment	FALSE	canonical	3	43	junction_1	1	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAAGTTGTTGGGAGTGA	NA	False	NA	NA	False	AAGAAA	-8	NA	202375500	202468055	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_202377551_202464808_202464980_202467518
transcript_122048.nnic	chr2	+	2398	9	NNC	ENSG00000138439.12	novel	5982	8	NA	NA	0	-3312	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	35.7121740447148	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGATTTATGTTTTTG	202632850	True	NA	NA	False	ATTAAA	-17	NA	202634968	202766445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_202635343_202635614_202635789_202695880_202696033_202724916_202725010_202726249_202726364_202755537_202755682_202757212_202757439_202759232_202759354_202765445
transcript_12205.known	chr1	-	452	2	FSM	ENSG00000155380.13	ENST00000478835.1	452	2	0	0	0	0	multi-exon	FALSE	canonical	3	1224	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGTGTCTGTATTAGGT	-112956137	False	NA	NA	False	NA	NA	NA	112956181	112929047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_112929353_112956034
transcript_122055.known	chr2	-	7961	13	FSM	ENSG00000163596.17	ENST00000358299.7	7961	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2.82351239101624	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGACACTTTCTCATAAA	-202871732	False	NA	NA	False	AATAAA	-3	NA	202871766	202773175	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_202779649_202785917_202786008_202788829_202789088_202796889_202796965_202811745_202811790_202814701_202814785_202815910_202816010_202817417_202817544_202819700_202819900_202821357_202821482_202825694_202825768_202828847_202829017_202871618
transcript_122059.known	chr2	-	8068	13	FSM	ENSG00000138442.11	ENST00000261015.5	8068	13	0	0	0	0	multi-exon	FALSE	canonical	3	698	junction_8	44.0331314655983	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTTTAAAGGTGTTAAAT	-202911650	False	NA	NA	False	AGTAAA	-25	NA	202911673	202874260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_202880938_202882710_202882784_202883608_202883742_202884197_202884304_202884394_202884536_202892616_202892703_202894580_202894627_202896064_202896220_202897299_202897416_202899530_202899638_202901024_202901120_202907864_202907960_202911435
transcript_122067.nic	chr2	-	1657	6	ISM	ENSG00000138442.11	ENST00000688520.1	8621	13	77	21429	77	308	5prime_fragment	FALSE	canonical	3	698	junction_1	45.1911495759955	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCGGGCATGGTGGCGC	-202911805	True	NA	NA	False	ACTAAA	-18	NA	202912149	202895689	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_202896220_202897299_202897416_202899530_202899638_202901024_202901120_202907864_202907960_202911435
transcript_122071.known	chr2	+	5938	16	FSM	ENSG00000138380.18	ENST00000402905.7	5938	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	2.98142396999972	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTTGGCCAGAGATTTA	NA	False	NA	NA	False	AATAAA	-16	NA	202912213	202987063	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_202912325_202917876_202918044_202941859_202941981_202942739_202942968_202952558_202952680_202954004_202954135_202955673_202955759_202961236_202961427_202966977_202967099_202969918_202970063_202971504_202971739_202974333_202974497_202977268_202977333_202981554_202981686_202982071_202982442_202983505
transcript_122074.nic	chr2	+	733	5	ISM	ENSG00000144426.19	ENST00000478884.5	1012	7	-63	5984	-4	0	5prime_fragment	FALSE	canonical	1	2	junction_4	4.32290411644765	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGTAGGTGTGAACTAAT	203013815	True	NA	-1	True	NA	NA	NA	203014861	203056504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_203014983_203016155_203016436_203041764_203041857_203049813_203049976_203056426
transcript_122075.known	chr2	+	521	3	FSM	ENSG00000144426.19	ENST00000683927.1	521	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	4.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTGTGCTTTTCATTTT	203013832	True	NA	NA	False	AATAAA	-13	NA	203014878	203016735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_203014983_203016155_203016436_203016598
transcript_122076.known	chr2	+	10552	13	FSM	ENSG00000119004.17	ENST00000356079.9	10552	13	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_3	29.698484809835	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTAGTCATTTGTTCCT	203237128	True	NA	15	True	AATATA	-35	NA	203239017	203306026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_203239135_203245845_203245896_203246754_203246922_203251966_203252110_203266513_203266682_203272669_203272749_203278572_203278689_203280058_203280114_203285611_203285733_203289764_203289877_203292261_203292327_203296473_203296564_203296757
transcript_122084.known	chr2	+	1730	12	FSM	ENSG00000119004.17	ENST00000449301.5	1730	12	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	46.5946118262581	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGGAATCATGTTTGTT	203237087	True	NA	17	True	AAAAAG	-17	NA	203238976	203297242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_203239135_203245845_203245896_203246754_203246922_203251966_203252110_203266513_203266682_203278572_203278689_203280058_203280114_203285611_203285733_203289764_203289877_203292261_203292327_203296473_203296564_203296757
transcript_122086.known	chr2	+	2636	12	FSM	ENSG00000119004.17	ENST00000431118.5	2636	12	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	46.8350366836306	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGTGGGAGGATCACTT	203237137	True	NA	NA	False	NA	NA	NA	203239026	203298286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_203239135_203245845_203245896_203251966_203252110_203266513_203266682_203272669_203272749_203278572_203278689_203280058_203280114_203285611_203285733_203289764_203289877_203292261_203292327_203296473_203296564_203296757
transcript_122090.known	chr2	+	1359	11	FSM	ENSG00000119004.17	ENST00000461371.5	1359	11	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	42.8164687941451	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTATTTGTACTTAATTT	203237092	True	NA	4	True	TATAAA	-24	NA	203238981	203297014	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_203239135_203251966_203252110_203266513_203266682_203272669_203272749_203278572_203278689_203280058_203280114_203285611_203285733_203289764_203289877_203292261_203292327_203296473_203296564_203296757
transcript_122101.known	chr2	+	6567	12	FSM	ENSG00000138443.17	ENST00000261018.12	6567	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	168.199458534324	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGGTGTCTTGTTAACTT	203317231	True	NA	15	True	AATAAA	-16	NA	203328393	203432169	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_203328632_203366876_203367045_203380207_203380385_203382188_203382207_203391045_203391144_203394699_203394847_203395655_203395781_203396784_203396968_203402575_203402735_203411284_203411372_203416907_203417082_203427176
transcript_122105.nic	chr2	+	1967	11	NIC	ENSG00000138443.17	novel	6484	10	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_2	156.433244548593	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTGAAATAAAATGACCAT	203317106	True	NA	-12	True	NA	NA	NA	203328268	203427569	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_203328632_203366876_203367045_203376056_203376133_203380207_203380385_203391045_203391144_203394699_203394847_203395655_203395781_203402575_203402735_203411284_203411372_203416907_203417082_203427176
transcript_122115.known	chr2	+	2240	10	FSM	ENSG00000138443.17	ENST00000424558.5	2240	10	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	161.901204442709	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGCATCCCTTCATGT	203317232	True	NA	NA	False	NA	NA	NA	203328394	203427948	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_203328632_203366876_203367045_203380207_203380385_203391045_203391144_203394699_203394847_203395655_203395781_203396784_203396968_203402575_203402735_203416907_203417082_203427176
transcript_122117.known	chr2	+	6484	10	FSM	ENSG00000138443.17	ENST00000261017.9	6484	10	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_8	87.5468128742814	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCTTGTTAACTTATTT	203317117	True	NA	19	True	AATAAA	-20	NA	203328279	203432173	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_203328632_203366876_203367045_203380207_203380385_203391045_203391144_203394699_203394847_203395655_203395781_203402575_203402735_203411284_203411372_203416907_203417082_203427176
transcript_122124.nic	chr2	+	1813	9	NIC	ENSG00000138443.17	novel	6484	10	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	194	junction_7	85.5537111994564	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTGAAATAAAATGACCAT	203317097	True	NA	-12	True	NA	NA	NA	203328259	203427569	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_203328632_203366876_203367045_203380207_203380385_203391045_203391144_203394699_203394847_203395655_203395781_203402575_203402735_203416907_203417082_203427176
transcript_122125.nic	chr2	+	4235	9	NIC	ENSG00000138443.17	novel	6484	10	NA	NA	-404	1011	combination_of_known_junctions	TRUE	canonical	3	194	junction_7	85.5537111994564	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTGGGCGTGGTGGCGC	NA	False	NA	NA	False	ACTAAA	-11	NA	203327875	203429607	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_203328632_203366876_203367045_203380207_203380385_203391045_203391144_203394699_203394847_203395655_203395781_203402575_203402735_203416907_203417082_203427176
transcript_122126.nic	chr2	+	4398	9	NIC	ENSG00000138443.17	novel	6484	10	NA	NA	-404	1174	combination_of_known_junctions	FALSE	canonical	3	194	junction_7	85.5537111994564	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCCCACAGCTCACCACTA	NA	False	NA	NA	False	NA	NA	NA	203327875	203429770	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_203328632_203366876_203367045_203380207_203380385_203391045_203391144_203394699_203394847_203395655_203395781_203402575_203402735_203416907_203417082_203427176
transcript_122139.known	chr2	-	2768	16	FSM	ENSG00000173166.18	ENST00000308091.8	2768	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	5.52167446422631	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTTTTGTTTGTTGTGTT	-203535321	False	NA	1	True	NA	NA	NA	203535335	203441469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_203442081_203444867_203445011_203447958_203448080_203448737_203448837_203454429_203454541_203455436_203455581_203457529_203457596_203459906_203460029_203461248_203461409_203461847_203461926_203470238_203470314_203477075_203477157_203489583_203490090_203491213_203491320_203495233_203495354_203535110
transcript_122142.nic	chr2	+	3076	2	ISM	ENSG00000116117.19	ENST00000349953.7	3315	22	-528	927205	-3	130422	5prime_fragment	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTCTTATTTTTCTGAC	204545249	True	NA	NA	False	AAAAAG	-11	NA	204545471	204688608	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_204546120_204686180
transcript_122146.known	chr2	+	2386	10	FSM	ENSG00000118257.17	ENST00000417189.5	2386	10	0	0	0	0	multi-exon	TRUE	canonical	1	13	junction_1	18.2154458945095	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGCCAGGCACTGTGC	205680824	True	NA	7	True	AATAAA	-23	NA	205682506	205743698	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_205682906_205683090_205683364_205697543_205697722_205716192_205716375_205722477_205722709_205723784_205723941_205725912_205726083_205727890_205728047_205740518_205740664_205743202
transcript_12215.known	chr1	+	11566	18	FSM	ENSG00000198799.12	ENST00000361127.6	11566	18	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_11	16.5228163521723	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGGTCTTCTTTTGCC	113068631	True	NA	5	True	AATAAA	-17	NA	113073197	113132260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_113073646_113091317_113091384_113093205_113093281_113093429_113093565_113094338_113094483_113094611_113094756_113095873_113096018_113096221_113096366_113098704_113098786_113100210_113100283_113100419_113100489_113107593_113107758_113110241_113110563_113112478_113112761_113114426_113114877_113116286_113116437_113119232_113119524_113123874
transcript_122159.nnic	chr2	-	503	4	NNC	ENSG00000114933.16	novel	14128	11	NA	NA	308	6008	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	4.98887651569859	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAGGAAGAAAAAGAATGA	-206085829	False	NA	NA	False	NA	NA	NA	206085866	206056897	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_206056944_206062798_206063046_206063150_206063245_206085750
transcript_122160.nic	chr2	-	772	4	ISM	ENSG00000114933.16	ENST00000403263.6	14128	11	-111	63177	18	6008	5prime_fragment	FALSE	canonical	1	1	junction_3	5.8878405775519	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAGGAAGAAAAAGAATGA	-206086248	False	NA	NA	False	NA	NA	NA	206086285	206056897	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_206056944_206062798_206063046_206063150_206063245_206085900
transcript_122161.known	chr2	+	752	2	FSM	ENSG00000227946.2	ENST00000420509.1	752	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATTTTAATATTTTTTT	206084432	True	NA	NA	False	NA	NA	NA	206084604	206086564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_206084749_206085956
transcript_122163.known	chr2	-	11660	19	FSM	ENSG00000023228.14	ENST00000233190.11	11660	19	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_16	51.8169856321265	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCTGGATCAATTAACATG	-206148614	True	NA	-16	True	AATAAA	-17	NA	206159444	206114816	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_206124277_206126538_206126612_206126709_206126845_206127796_206127973_206130087_206130243_206132944_206133106_206138484_206138615_206141940_206142070_206142685_206142832_206144017_206144133_206144891_206145027_206146902_206147089_206147530_206147662_206147752_206147835_206149019_206149097_206149817_206149926_206152418_206152511_206153617_206153683_206159340
transcript_122169.known	chr2	-	2631	18	FSM	ENSG00000023228.14	ENST00000423725.5	2631	18	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_16	117.161645648534	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAAGATTTAAGCACC	-206148679	True	NA	-19	True	ATTAAA	-21	NA	206159509	206123818	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_206124277_206126538_206126612_206126709_206126845_206127796_206127973_206130087_206130243_206132944_206133106_206138484_206138615_206141940_206142070_206142685_206142832_206144017_206144133_206144891_206145027_206146902_206147089_206147530_206147662_206147752_206147835_206149019_206149097_206149817_206149926_206153617_206153683_206159340
transcript_122177.nic	chr2	-	519	5	ISM	ENSG00000023228.14	ENST00000233190.11	11660	19	-78	34208	-13	-1243	5prime_fragment	FALSE	canonical	3	389	junction_2	20.5228531154905	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGTACTTTATTGTTAT	-206148692	True	NA	NA	False	AATGAA	-41	NA	206159522	206149024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_206149097_206149817_206149926_206152418_206152511_206153617_206153683_206159340
transcript_122178.known	chr2	+	912	8	FSM	ENSG00000114942.14	ENST00000429769.5	912	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	1913.44026106201	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGATATGCTGGAGGAGC	206145892	True	NA	-98	True	GATAAA	-6	NA	206159635	206162801	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_206159685_206159958_206160060_206160587_206160711_206160886_206161133_206161345_206161473_206162037_206162105_206162488_206162615_206162728
transcript_122179.known	chr2	+	844	7	FSM	ENSG00000114942.14	ENST00000236957.9	844	7	0	0	0	0	multi-exon	FALSE	canonical	3	945	junction_1	1181.22315372197	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGGCTCTTGAGTATGT	206159566	False	NA	29	True	AATAAA	-15	NA	206159584	206162928	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_206159685_206159958_206160060_206160587_206160711_206161345_206161473_206162037_206162105_206162488_206162615_206162728
transcript_122180.known	chr2	+	880	7	FSM	ENSG00000114942.14	ENST00000392221.5	880	7	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_1	1381.82857917407	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGGCTCTTGAGTATG	206145850	True	NA	28	True	AATAAA	-14	NA	206159593	206162927	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_206159685_206159912_206160060_206160587_206160711_206161345_206161473_206162037_206162105_206162488_206162615_206162728
transcript_122185.known	chr2	+	515	5	FSM	ENSG00000114942.14	ENST00000445505.5	515	5	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_1	1536.3668995393	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CACAATATGAATCAAAGAAA	206145863	True	NA	NA	False	NA	NA	NA	206159606	206162077	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_206159685_206159912_206160060_206160587_206160711_206161345_206161473_206162037
transcript_122187.known	chr2	+	808	6	FSM	ENSG00000114942.14	ENST00000392222.7	808	6	0	0	0	0	multi-exon	FALSE	canonical	3	3767	junction_2	219.069304102606	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGGCTCTTGAGTATGT	206145467	True	NA	29	True	AATAAA	-15	NA	206159894	206162928	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_206160060_206160587_206160711_206161345_206161473_206162037_206162105_206162488_206162615_206162728
transcript_122188.known	chr2	+	6334	26	FSM	ENSG00000114948.13	ENST00000264377.8	6334	26	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_24	14.7586449242469	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTTGTAGCTTTATGCT	206442133	True	NA	13	True	ATTAAA	-16	NA	206443531	206621127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_206444081_206445306_206445525_206481231_206481309_206530884_206530949_206542051_206542135_206543252_206543317_206547428_206547502_206548280_206548355_206550094_206550161_206557426_206557499_206559954_206560119_206561127_206561213_206562202_206562294_206565019_206565069_206567222_206567323_206570739_206570812_206571726_206571817_206573114_206573196_206587324_206587376_206588090_206588155_206589408_206589515_206592616_206592737_206594736_206594906_206596050_206596163_206609909_206610001_206617578
transcript_122195.nic	chr2	-	1208	5	ISM	ENSG00000138400.13	ENST00000454776.6	1795	12	-46	16515	-4	1847	5prime_fragment	FALSE	canonical	3	9	junction_4	4.02336923485777	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATATTATTCAGGTGATA	-206764963	True	NA	-16	True	AATAAA	-18	NA	206765332	206754771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_206755506_206756897_206757041_206757236_206757372_206760900_206761014_206765249
transcript_122198.known	chr2	+	3188	12	FSM	ENSG00000118246.14	ENST00000236980.10	3188	12	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_1	73.6063912065133	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGAGGACTATTTTTTC	NA	False	NA	24	True	ATTAAA	-28	NA	206765356	206792509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_206765655_206766643_206767471_206770090_206770195_206771181_206771291_206771893_206772018_206772180_206772321_206774224_206774398_206786732_206786900_206787936_206788156_206788818_206788904_206790571_206790687_206791682
transcript_122203.known	chr2	+	2344	12	FSM	ENSG00000118246.14	ENST00000403094.3	2344	12	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	118.789417120528	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCAACCTTTTCATATT	206760663	True	NA	-7	True	AATAAA	-4	NA	206765605	206791806	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_206765763_206766643_206767471_206770090_206770195_206771181_206771291_206771893_206772018_206772180_206772321_206774224_206774398_206786732_206786900_206787936_206788156_206788818_206788904_206790571_206790687_206791682
transcript_122220.nic	chr2	-	3498	5	NIC	ENSG00000118263.15	novel	1788	5	NA	NA	0	54	combination_of_known_junctions	FALSE	canonical	1	5	junction_4	9.80752262296652	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACACCCGTTAACACACAC	-207165902	False	284	NA	False	AATACA	-19	NA	207166186	207079035	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_207081265_207088457_207088582_207123773_207124405_207165466_207165707_207165912
transcript_122221.nic	chr2	-	3353	5	NIC	ENSG00000118263.15	novel	1788	5	NA	NA	-38	54	combination_of_known_junctions	FALSE	canonical	1	2	junction_4	11.0905365064094	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACACCCGTTAACACACAC	NA	False	NA	NA	False	AATACA	-19	NA	207166885	207079035	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_207081265_207088457_207088582_207123773_207124405_207165466_207165707_207166756
transcript_122225.known	chr2	-	8365	4	FSM	ENSG00000118263.15	ENST00000309446.11	8365	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	1.88561808316413	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGGCTAGTGTGACTGAA	-207165373	True	NA	NA	False	AATAAA	-16	NA	207165948	207074136	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_207081265_207088457_207088582_207123773_207124405_207165466
transcript_122226.known	chr2	-	539	4	FSM	ENSG00000118263.15	ENST00000458272.1	539	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	13.29995822884	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACTATATTTAAAATATAT	-207165287	False	NA	NA	False	NA	NA	NA	207165571	207081015	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_207081265_207088457_207088582_207124343_207124405_207165466
transcript_122231.known	chr2	+	7650	9	FSM	ENSG00000118260.15	ENST00000432329.6	7650	9	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_4	53.7864701853542	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAAGTCTCTTTTTTGGGG	207520014	True	NA	10	True	CATAAA	-18	NA	207529891	207603431	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_207530135_207555627_207555750_207560225_207560373_207561118_207561161_207567462_207567564_207570178_207570322_207575271_207575455_207577504_207577656_207596913
transcript_122239.known	chr2	+	10095	8	FSM	ENSG00000118260.15	ENST00000353267.8	10095	8	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_3	33.5577479724071	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCATAAGGCTTTCCTTT	207520084	True	NA	NA	False	ATTAAA	-18	NA	207529961	207605988	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_207530135_207555627_207555750_207560225_207560373_207567462_207567564_207570178_207570322_207575271_207575455_207577504_207577656_207596913
transcript_122244.known	chr2	+	2005	8	FSM	ENSG00000118260.15	ENST00000430624.5	2005	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	68.463605704947	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACGACAAAGCATGGTATT	207529719	False	NA	NA	False	ATTAAA	-15	NA	207529736	207597789	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_207530019_207555627_207555750_207560225_207560373_207567462_207567564_207570178_207570322_207575271_207575455_207577504_207577656_207596913
transcript_122252.nic	chr2	-	2505	5	NIC	ENSG00000144401.14	novel	1103	4	NA	NA	-74	0	combination_of_known_junctions	TRUE	canonical	3	67	junction_1	243.667165412166	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCATTCTGTGATATACC	-207625405	False	NA	-5	True	AATAAA	-17	NA	207625453	207609113	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_207609766_207612067_207613444_207621805_207621918_207624228_207624405_207625264
transcript_122261.known	chr2	-	869	4	FSM	ENSG00000144401.14	ENST00000425132.5	869	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	269.747206761359	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAAGATTAGAGAAAGCTG	-207618726	True	NA	NA	False	GATAAA	-22	NA	207625379	207581694	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_207582161_207621805_207621918_207624228_207624405_207625264
transcript_122267.known	chr2	-	4805	4	FSM	ENSG00000144401.14	ENST00000411432.5	4805	4	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_3	247.242121546201	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCATTCTGTGATATAC	-207625201	False	NA	-6	True	AATAAA	-16	NA	207625249	207609114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_207613444_207621805_207621918_207624228_207624405_207625061
transcript_122268.known	chr2	-	1103	4	FSM	ENSG00000144401.14	ENST00000406927.6	1103	4	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_3	84.0991478355558	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGGGCCGGTATAAAGAA	-207618725	True	NA	-31	True	AATAAA	-19	NA	207625378	207612742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_207613444_207621805_207621918_207624228_207624405_207625264
transcript_122269.known	chr2	-	1003	4	FSM	ENSG00000144401.14	ENST00000442521.1	1003	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	292.896265292377	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATATTTAATGAAATGTCT	-207625788	True	NA	NA	False	NA	NA	NA	207625927	207612979	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_207613444_207621805_207621918_207624228_207624405_207625676
transcript_122277.nic	chr2	-	1031	3	NIC	ENSG00000144401.14	novel	1103	4	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	231.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGTCTTTAAATGAGTAA	-207618749	True	NA	-15	True	AATAAA	-35	NA	207625402	207612726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_207613444_207624228_207624405_207625264
transcript_12228.nic	chr1	+	2601	11	ISM	ENSG00000081026.19	ENST00000369611.4	3596	21	-560	38662	-86	-38662	5prime_fragment	FALSE	canonical	3	14	junction_8	4.7116875957559	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGAGTATACACTGGTCC	113389859	True	NA	NA	False	NA	NA	NA	113390428	113643772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_113391350_113549514_113549632_113580541_113580662_113585386_113585597_113590483_113590659_113594480_113594561_113614600_113614659_113619735_113619831_113622805_113622995_113641910_113642517_113643742
transcript_122283.nnic	chr2	+	3759	11	NNC	ENSG00000163249.13	novel	3813	10	NA	NA	-25	0	intron_retention	FALSE	non_canonical	0	0	junction_10	50.8319781240117	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTAGTGTGTTTGTAA	207708225	True	NA	NA	False	AATAAA	-18	NA	207711514	207756174	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_207712117_207724799_207724875_207726841_207726877_207733946_207734048_207737410_207737447_207740654_207740707_207742222_207742343_207747046_207747214_207750956_207751120_207753587_207754757_207754935
transcript_122285.known	chr2	+	3813	10	FSM	ENSG00000163249.13	ENST00000295414.8	3813	10	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_3	22.7259573132238	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTAGTGTGTTTGTAA	207708350	True	NA	NA	False	AATAAA	-18	NA	207711639	207756174	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_207712117_207724799_207724875_207726841_207726877_207733946_207734048_207737410_207737447_207740654_207740707_207742222_207742343_207747046_207747214_207750956_207751120_207753587
transcript_12229.known	chr1	+	897	3	FSM	ENSG00000081026.19	ENST00000486456.1	897	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTCTGTTTCCTCTACC	113391119	False	NA	NA	False	TATAAA	-44	NA	113391130	113581102	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_113391350_113549514_113549632_113580541
transcript_122292.known	chr2	+	2124	9	FSM	ENSG00000163249.13	ENST00000650811.1	2124	9	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	43.1827511860928	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCTAGCCTCAGCCACAC	207711769	False	NA	NA	False	NA	NA	NA	207711795	207754742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_207712117_207724799_207724875_207726841_207726877_207737410_207737447_207740654_207740707_207742222_207742343_207747046_207747214_207750956_207751120_207753587
transcript_122295.known	chr2	+	2619	8	FSM	ENSG00000163249.13	ENST00000339882.9	2619	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	60.6498818075131	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATGTGTCTGTAGTCCC	207711724	False	NA	NA	False	AATAAA	-16	NA	207711750	207755244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_207712117_207724799_207724875_207726841_207726877_207737410_207737447_207742222_207742343_207747046_207747214_207750956_207751120_207753587
transcript_122301.known	chr2	-	7039	2	FSM	ENSG00000163251.4	ENST00000295417.4	7039	2	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	0	212	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGTAGAAGTCTTTTT	-207761120	True	NA	-26	True	AATAAA	-3	NA	207769906	207762597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_207768995_207769264
transcript_122303.known	chr2	-	9774	8	FSM	ENSG00000178385.15	ENST00000427836.8	9774	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	1.29362644830535	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCCTTTCTCATAACAAC	-208024927	True	NA	-18	True	AATAAA	-15	NA	208025527	207821287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_207828497_207861104_207861263_207908513_207908578_207930925_207931120_207946366_207946513_207976650_207977587_208001029_208001958_208025388
transcript_122304.nic	chr2	-	2764	3	ISM	ENSG00000178385.15	ENST00000457206.1	3689	8	-39	75859	-10	-75859	5prime_fragment	FALSE	canonical	2	9	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCCAGGTGCAGTGGCT	-208024937	True	NA	NA	False	AGTAAA	-24	NA	208025537	207975899	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_207977587_208001029_208001958_208025388
transcript_122305.known	chr2	-	423	2	FSM	ENSG00000229150.2	ENST00000689457.1	729	2	143	163	3	-84	multi-exon	TRUE	canonical	3	51	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGAGGCCGGGGGACTG	-208112478	False	NA	NA	False	NA	NA	NA	208112508	208108316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_208108497_208112265
transcript_122306.known	chr2	-	642	3	FSM	ENSG00000118231.5	ENST00000264376.5	642	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	22.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATTTGCTTGTGTCTTTC	-208124226	True	NA	-3	True	AATAAA	-24	NA	208124524	208121606	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_208121946_208124111_208124355_208124464
transcript_122314.known	chr2	-	2441	10	FSM	ENSG00000138413.14	ENST00000415913.5	2441	10	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_9	1620.24339735321	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTTGATTTTAATTAAAAT	-208254303	False	NA	-5	True	ATTAAA	-23	NA	208254322	208236264	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_208237170_208239070_208239234_208239862_208240004_208241993_208242146_208243426_208243605_208245318_208245425_208248368_208248661_208251429_208251568_208253885_208253960_208254030
transcript_122316.known	chr2	-	2298	10	FSM	ENSG00000138413.14	ENST00000446179.5	2298	10	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_9	1617.52815534486	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTCTTCTGCGTTTCTGT	-208254439	False	NA	-9	True	ATTAAA	-16	NA	208254458	208236231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_208237170_208239070_208239234_208239862_208240004_208241993_208242146_208243426_208243605_208245318_208245425_208248368_208248661_208251429_208251568_208253885_208253960_208254342
transcript_122317.known	chr2	-	2318	10	FSM	ENSG00000138413.14	ENST00000345146.7	2318	10	0	0	0	0	multi-exon	FALSE	canonical	3	4389	junction_1	459.440239131634	2560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCTGCGTTTCTGTTTA	-208197551	True	NA	-6	True	ATTAAA	-19	NA	208255071	208236228	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_208237170_208239070_208239234_208239862_208240004_208241993_208242146_208243426_208243605_208245318_208245425_208248368_208248661_208251429_208251568_208253885_208253960_208254938
transcript_122335.known	chr2	-	702	5	FSM	ENSG00000138413.14	ENST00000417583.5	702	5	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_4	2231.57242768412	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTATCACTCCTGATGAGA	-208255779	True	NA	NA	False	TATAAA	-28	NA	208255798	208248561	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_208248661_208251429_208251568_208253885_208253960_208254938_208255060_208255528
transcript_122337.known	chr2	-	1614	4	FSM	ENSG00000138413.14	ENST00000462386.5	1614	4	0	0	0	0	multi-exon	FALSE	canonical	3	4760	junction_3	346.95276655796	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATTGCTTCTTTACTT	-208197541	True	NA	NA	False	ACTAAA	-23	NA	208255061	208247381	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_208248661_208251429_208251568_208253885_208253960_208254938
transcript_122338.known	chr2	-	556	3	FSM	ENSG00000138413.14	ENST00000481557.1	556	3	0	0	0	0	multi-exon	FALSE	canonical	3	4760	junction_2	334	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGGAAAAAAAAGGGA	-208197593	True	NA	NA	False	TTTAAA	-2	NA	208255113	208251260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_208251568_208253885_208253960_208254938
transcript_122343.known	chr2	+	464	2	FSM	ENSG00000231908.2	ENST00000440574.2	497	2	33	0	33	0	multi-exon	FALSE	canonical	3	99	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCATGCTTGTATATTGCT	208254819	True	NA	26	True	AATAAA	-31	NA	208255246	208256181	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_208255432_208255902
transcript_122344.known	chr2	+	489	2	FSM	ENSG00000231908.2	ENST00000448588.1	489	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGTAGGACAATAGCATG	208254972	False	NA	13	True	AATAAA	-18	NA	208255399	208256168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_208255623_208255902
transcript_122349.known	chr2	+	2752	13	FSM	ENSG00000144407.10	ENST00000272847.7	2752	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.11492401335497	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTGGATCACTTTTTAA	208406769	True	NA	NA	False	ATTAAA	-18	NA	208406791	208494506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_208407119_208428200_208428304_208437536_208437648_208437759_208437882_208442363_208442462_208443347_208443538_208444733_208444888_208450748_208450810_208459894_208459962_208481069_208481165_208489011_208489151_208490638_208490681_208493263
transcript_122350.known	chr2	+	2241	15	FSM	ENSG00000078018.21	ENST00000199940.10	2241	15	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	6.73742214373251	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTAGTAATTGTTACAATT	209423398	True	NA	4	True	AATAAA	-17	NA	209424057	209730518	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_209424277_209507591_209507642_209580035_209580101_209625052_209625130_209653141_209653433_209678571_209678686_209680749_209680828_209700276_209700339_209704449_209704621_209705579_209705728_209709913_209710255_209723594_209723688_209725708_209725791_209729849_209729963_209730181
transcript_122356.known	chr2	+	1128	7	FSM	ENSG00000197713.15	ENST00000436630.6	1128	7	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_3	248.276335740821	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGCATATTAGCTACACTA	209993471	True	NA	NA	False	NA	NA	NA	210002583	210020100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_210002784_210009656_210009737_210015972_210016113_210016203_210016258_210016506_210016642_210017472_210017560_210019668
transcript_122357.known	chr2	+	925	7	FSM	ENSG00000197713.15	ENST00000429907.5	925	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	276.614452904319	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAAGAGGTCAGAAATTG	209993529	True	NA	8	True	ATTAAA	-18	NA	210002641	210019940	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_210002784_210009656_210009737_210015972_210016113_210016506_210016642_210017472_210017560_210018152_210018222_210019668
transcript_12236.known	chr1	-	3657	19	FSM	ENSG00000116793.16	ENST00000369604.6	3657	19	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	53.5007788105307	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGTCTATAATCGGCC	-113758270	True	NA	NA	False	ATTAAA	-22	NA	113759486	113696830	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_113697726_113698261_113698388_113699703_113699800_113700793_113700950_113704080_113704168_113704665_113704798_113705889_113706163_113706593_113706723_113710253_113710476_113711745_113711836_113711939_113712114_113713278_113713439_113724758_113724894_113726417_113726575_113738109_113738269_113738729_113738800_113757698_113757756_113758658_113758734_113759022
transcript_122363.known	chr2	+	858	6	FSM	ENSG00000197713.15	ENST00000435437.2	858	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	239.187457865165	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATAACTACATTTTTA	209993544	True	NA	29	True	ATTAAA	-39	NA	210002656	210019961	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_210002784_210009656_210009737_210015972_210016113_210016506_210016642_210017472_210017560_210019672
transcript_122366.known	chr2	+	2130	6	FSM	ENSG00000197713.15	ENST00000454822.5	2130	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	275.29402463548	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTCTTGAGGCTACTAT	209993515	True	NA	NA	False	AATAAA	-17	NA	210002627	210021226	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_210002784_210015972_210016113_210016203_210016258_210016506_210016642_210017472_210017560_210019668
transcript_122367.known	chr2	+	796	5	FSM	ENSG00000197713.15	ENST00000438204.6	796	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	255.417672646197	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATAACTACATTTTTA	209993530	True	NA	29	True	ATTAAA	-39	NA	210002642	210019961	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_210002784_210015972_210016113_210016506_210016642_210017472_210017560_210019668
transcript_122368.known	chr2	-	2515	11	FSM	ENSG00000115361.8	ENST00000233710.4	2515	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.28452325786651	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTTAACATGGAAACAGAT	-210225419	True	NA	NA	False	AATAAA	-17	NA	210225447	210187922	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_210189055_210192803_210192891_210195210_210195339_210203330_210203445_210204580_210204683_210205631_210205797_210210195_210210263_210216346_210216512_210217964_210218103_210220646_210220803_210225186
transcript_122370.known	chr2	-	4592	10	FSM	ENSG00000115365.12	ENST00000450366.7	4592	10	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_9	39.7690865737897	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCATCATGTGCTTTTTGT	-210471825	True	NA	-7	True	AATAAA	-18	NA	210476759	210431250	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_210434564_210435386_210435460_210436215_210436393_210437689_210437873_210440597_210440745_210441307_210441444_210455106_210455315_210471958_210472077_210476315_210476413_210476619
transcript_122371.known	chr2	-	1270	10	FSM	ENSG00000115365.12	ENST00000431941.6	1270	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_9	87.1020403440629	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATAGCATGCCACCTGC	-210476396	False	NA	NA	False	NA	NA	NA	210476775	210434486	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_210434564_210435386_210435460_210436215_210436393_210437689_210437873_210440597_210440745_210441307_210441444_210455106_210455315_210471958_210472077_210476315_210476413_210476721
transcript_122375.known	chr2	-	1647	10	FSM	ENSG00000115365.12	ENST00000233714.8	1647	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	97.1243316706434	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGACTATTATTGGGTA	-210471771	True	NA	NA	False	GATAAA	-7	NA	210476705	210434114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_210434564_210435386_210435460_210436215_210436393_210437689_210437873_210440597_210440745_210441307_210441444_210455106_210455315_210471958_210472077_210476315_210476413_210476646
transcript_122376.known	chr2	-	4503	10	FSM	ENSG00000115365.12	ENST00000441020.7	4503	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	97.1243316706434	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCATGTGCTTTTTGTTT	-210471823	True	NA	-5	True	AATAAA	-20	NA	210476757	210431248	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_210434564_210435386_210435460_210436215_210436393_210437689_210437873_210440597_210440745_210441307_210441444_210455106_210455315_210471958_210472077_210476315_210476413_210476708
transcript_122377.known	chr2	-	4781	9	FSM	ENSG00000115365.12	ENST00000443314.5	4781	9	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_1	25.0786263579168	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCATGTGCTTTTTGTTT	-210471805	True	NA	-5	True	AATAAA	-20	NA	210476739	210431248	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_210434564_210435386_210435460_210436215_210436393_210437689_210437873_210440597_210440745_210441307_210441444_210455106_210455315_210471958_210472077_210476315
transcript_122378.known	chr2	+	4880	40	FSM	ENSG00000021826.18	ENST00000673510.1	4880	40	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_2	7.88852310918726	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAGTCACTTCTTCAAAA	210477256	True	NA	NA	False	ATTAAA	-2	NA	210477681	210678142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_210477767_210519550_210519671_210556718_210556860_210573297_210573408_210576345_210576491_210577420_210577511_210579713_210579771_210582616_210582710_210588057_210588148_210590105_210590235_210590799_210590907_210591830_210591970_210592878_210592957_210594507_210594607_210595486_210595583_210599371_210599562_210600554_210600713_210602201_210602331_210605101_210605247_210606730_210606942_210608360_210608560_210612116_210612294_210616422_210616542_210637701_210637844_210639149_210639216_210639995_210640060_210642483_210642666_210647862_210648058_210648472_210648541_210650362_210650439_210654024_210654103_210656524_210656633_210658598_210658689_210660484_210660656_210663122_210663198_210668185_210668285_210674901_210674962_210675727_210675841_210677006_210677137_210677886
transcript_122379.known	chr2	+	5775	40	FSM	ENSG00000021826.18	ENST00000673630.1	5775	40	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	7.70929747688554	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGAACTATGGGGTCCCA	210477256	True	NA	NA	False	NA	NA	NA	210477681	210678923	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_210477767_210519550_210519785_210556718_210556860_210573297_210573408_210576345_210576491_210577420_210577511_210579713_210579771_210582616_210582710_210588057_210588148_210590105_210590235_210590799_210590907_210591830_210591970_210592878_210592957_210594507_210594607_210595486_210595583_210599371_210599562_210600554_210600713_210602201_210602331_210605101_210605247_210606730_210606942_210608360_210608560_210612116_210612294_210616422_210616542_210637701_210637844_210639149_210639216_210639995_210640060_210642483_210642666_210647862_210648058_210648472_210648541_210650362_210650439_210654024_210654103_210656524_210656633_210658598_210658689_210660484_210660656_210663122_210663198_210668185_210668285_210674901_210674962_210675727_210675841_210677006_210677137_210677886
transcript_12238.known	chr1	-	3244	18	FSM	ENSG00000116793.16	ENST00000393357.6	3244	18	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	52.9526784890958	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCTAGGTTTTCTTTGT	-113757939	False	1216	0	True	AATAAA	-22	NA	113759155	113697201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_113697726_113698261_113698388_113699703_113699800_113700793_113700950_113704080_113704168_113704665_113704798_113705889_113706163_113706593_113706723_113710253_113710476_113711745_113711836_113711939_113712114_113713278_113713439_113724758_113724894_113726417_113726575_113738109_113738269_113738729_113738800_113757698_113757756_113758658
transcript_122381.known	chr2	+	5760	38	FSM	ENSG00000021826.18	ENST00000233072.10	5760	38	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_16	6.03350760543447	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTTGAATCTGGTTTTA	NA	False	NA	4	True	AATAAA	-18	NA	210556598	210679107	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_210556860_210573297_210573408_210576345_210576491_210577420_210577511_210579713_210579771_210582616_210582710_210588057_210588148_210590105_210590235_210590799_210590907_210591830_210591970_210592878_210592957_210594507_210594607_210595486_210595583_210599371_210599562_210600554_210600713_210602201_210602331_210605101_210605247_210606730_210606942_210608360_210608560_210612116_210612294_210616422_210616542_210637701_210637844_210639149_210639216_210639995_210640060_210642483_210642666_210647862_210648058_210648472_210648541_210650362_210650439_210654024_210654103_210656524_210656633_210658598_210658689_210660484_210660656_210663122_210663198_210668185_210668285_210674901_210674962_210675727_210675841_210677006_210677137_210677886
transcript_122387.known	chr2	+	1059	10	NNC	ENSG00000144451.20	novel	1330	10	NA	NA	-10	165	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	170.928185049875	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTTATATATTCCGGGC	213279667	True	NA	NA	False	NA	NA	NA	213284378	213375219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_213284620_213296063_213296111_213297261_213297358_213310058_213310178_213317218_213317357_213340162_213340271_213350527_213350646_213364075_213364146_213375009_213375120_213375207
transcript_122388.known	chr2	+	1250	5	FSM	ENSG00000144451.20	ENST00000432529.6	1250	5	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_3	27.0774352552083	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTATACTGTTTTCCAT	213279680	True	NA	37	True	AATAAA	-21	NA	213284391	213317978	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_213284620_213296063_213296111_213297261_213297358_213310058_213310178_213317218
transcript_122398.known	chr2	-	5478	11	FSM	ENSG00000138376.11	ENST00000260947.9	5478	11	0	0	0	0	multi-exon	TRUE	canonical	3	126	junction_7	22.0320221495894	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCGTTTAAGAGCTGTAA	-214805375	True	NA	-9	True	AATAAA	-18	NA	214809683	214725645	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_214729009_214730410_214730509_214745066_214745160_214745721_214745855_214752446_214752556_214767481_214767655_214769231_214769313_214780559_214781510_214792296_214792446_214797060_214797118_214809411
transcript_122399.known	chr2	-	2131	11	FSM	ENSG00000138376.11	ENST00000613706.5	2131	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	51.0121554141756	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTAGAGTCATTCATATT	-214805375	True	NA	-26	True	NA	NA	NA	214809683	214728584	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_214729009_214730410_214730509_214745066_214745160_214745721_214745855_214752446_214752556_214767481_214767655_214769231_214769313_214780967_214781510_214792296_214792446_214797060_214797118_214809411
transcript_122401.known	chr2	-	2261	10	FSM	ENSG00000138376.11	ENST00000455743.5	2261	10	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_8	53.3252308660129	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGAGTTGCTTCCTCTTG	-214805365	True	NA	NA	False	NA	NA	NA	214809673	214728703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_214729009_214730410_214730509_214745066_214745160_214745721_214745855_214752446_214752556_214767481_214767655_214769231_214769313_214780559_214781510_214797060_214797118_214809411
transcript_122402.known	chr2	-	1456	10	FSM	ENSG00000138376.11	ENST00000620057.4	1456	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	52.3810822509213	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATTATACCAGATGAACA	-214805334	True	NA	-118	True	NA	NA	NA	214809642	214728676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_214729009_214730410_214730509_214745066_214745160_214745721_214745855_214752446_214752556_214767481_214767655_214769231_214769313_214792296_214792446_214797060_214797118_214809411
transcript_122404.nic	chr2	-	778	4	ISM	ENSG00000138376.11	ENST00000613706.5	2131	11	-36	52661	-36	-349	5prime_fragment	FALSE	canonical	3	131	junction_1	19.7989898732233	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAGCTGAAATCAACCAA	-214805411	True	NA	NA	False	AAAAAG	-38	NA	214809719	214781245	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_214781510_214792296_214792446_214797060_214797118_214809411
transcript_122406.known	chr2	-	573	2	FSM	ENSG00000138376.11	ENST00000479904.1	573	2	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATAATTCAAATAGATGT	-214805352	True	NA	NA	False	NA	NA	NA	214809660	214796793	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_214797118_214809411
transcript_122421.known	chr2	+	1972	16	FSM	ENSG00000138363.15	ENST00000236959.14	1972	16	0	0	0	0	multi-exon	FALSE	canonical	3	1067	junction_10	83.6645683667824	1462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATAGTTTTTGGTAGTTG	215296693	True	NA	27	True	AATAAA	-23	NA	215312058	215349764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_215312162_215312497_215312625_215318156_215318234_215319664_215319732_215325240_215325330_215325986_215326139_215326821_215326979_215332381_215332508_215333349_215333458_215334918_215335005_215336034_215336125_215338778_215338908_215344778_215344872_215346758_215346942_215349093_215349250_215349535
transcript_122426.known	chr2	+	2187	16	FSM	ENSG00000138363.15	ENST00000443953.5	2187	16	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	285.232926258913	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATAGTTTTTGGTAGTT	215296706	True	NA	26	True	AATAAA	-22	NA	215312071	215349763	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_215312391_215312497_215312625_215318156_215318234_215319664_215319732_215325240_215325330_215325986_215326139_215326821_215326979_215332381_215332508_215333349_215333458_215334918_215335005_215336034_215336125_215338778_215338908_215344778_215344872_215346758_215346942_215349093_215349250_215349535
transcript_12245.known	chr1	-	2747	15	FSM	ENSG00000116793.16	ENST00000357783.6	2747	15	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_14	55.2054141828683	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGATTTTCTGACTACA	-113758260	True	NA	-6	True	AATAAA	-21	NA	113759476	113703822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_113704168_113704665_113704798_113705889_113706163_113706593_113706723_113710253_113710476_113711745_113711836_113711939_113712114_113713278_113713439_113724758_113724894_113726417_113726575_113738109_113738269_113738729_113738800_113757698_113757756_113758658_113758849_113759022
transcript_122450.known	chr2	+	2275	15	FSM	ENSG00000138363.15	ENST00000435675.5	2275	15	0	0	0	0	multi-exon	FALSE	canonical	3	1067	junction_9	86.5713401696861	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATAGTTTTTGGTAGTT	215296725	True	NA	26	True	AATAAA	-22	NA	215312090	215349763	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_215312625_215318156_215318234_215319664_215319732_215325240_215325330_215325986_215326139_215326821_215326979_215332381_215332508_215333349_215333458_215334918_215335005_215336034_215336125_215338778_215338908_215344778_215344872_215346758_215346942_215349093_215349250_215349535
transcript_122453.known	chr2	-	2388	13	FSM	ENSG00000115414.21	ENST00000426059.1	2388	13	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_7	14.497844667398	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGATTTTGGTTTTGGTTT	-215433142	True	NA	NA	False	ATTAAA	-17	NA	215436073	215414660	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_215414959_215419241_215419386_215420672_215420802_215422090_215422244_215423349_215423527_215424145_215424326_215425093_215425286_215428179_215428339_215430714_215430853_215431832_215431965_215433323_215433462_215434695_215434825_215435654
transcript_122460.known	chr2	-	1867	8	FSM	ENSG00000115425.14	ENST00000265322.8	1867	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	33.5772031507773	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGCAGTGCCTGATTT	-216080276	True	NA	-1	True	TATAAA	-37	NA	216081809	216038387	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_216039361_216043903_216044016_216049262_216049374_216051448_216051546_216058894_216058977_216065311_216065478_216066384_216066519_216081617
transcript_122467.nnic	chr2	-	2515	6	NNC	ENSG00000118242.16	novel	2618	6	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.5932730352909	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTGGATGTGTGTTATA	-216010739	True	NA	-4	True	ATTAAA	-20	NA	216013606	215942586	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_215943596_215944280_215944998_215945570_215945735_215947022_215947114_215996305_215996466_216013232
transcript_122472.known	chr2	-	2618	6	FSM	ENSG00000118242.16	ENST00000620139.4	2618	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	44.5932730352909	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGATGTCGTATTGTTTTA	-216010746	True	NA	-21	True	AATAAA	-13	NA	216013613	215942804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_215943740_215944110_215944998_215945570_215945735_215947022_215947114_215996305_215996466_216013232
transcript_122473.nnic	chr2	-	2325	6	NNC	ENSG00000118242.16	novel	2618	6	NA	NA	-19	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.5932730352909	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGATGTCGTATTGTTTT	-216010765	True	NA	-22	True	AATAAA	-12	NA	216013632	215942805	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_215943588_215944269_215944998_215945570_215945735_215947022_215947114_215996305_215996466_216013232
transcript_122474.nnic	chr2	-	2331	6	NNC	ENSG00000118242.16	novel	2618	6	NA	NA	-28	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.5932730352909	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGATGTCGTATTGTTTT	NA	False	NA	-22	True	AATAAA	-12	NA	216013641	215942805	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_215943596_215944280_215944998_215945570_215945735_215947022_215947114_215996305_215996466_216013232
transcript_122478.known	chr2	-	3148	5	FSM	ENSG00000118242.16	ENST00000263268.11	3148	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_3	4.63680924774785	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGATGTGTGTTATATTT	-216010684	True	NA	-1	True	ATTAAA	-23	NA	216013551	215942583	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_215944998_215945570_215945735_215947022_215947114_215996305_215996466_216013232
transcript_122479.known	chr2	+	3322	3	FSM	ENSG00000163449.11	ENST00000437356.7	3322	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTTTGAGGCTCTTC	216081581	True	NA	24	True	AATAAA	-27	NA	216081918	216102783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_216081980_216095837_216096235_216099919
transcript_12248.nic	chr1	-	2361	13	ISM	ENSG00000116793.16	ENST00000369604.6	3657	19	-71	8934	-68	0	5prime_fragment	FALSE	canonical	3	88	junction_12	49.4780394608445	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGATATTTGTGGATTT	-113758341	True	NA	-8	True	AATAAA	-16	NA	113759557	113705764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_113706163_113706593_113706723_113710253_113710476_113711745_113711836_113711939_113712114_113713278_113713439_113724758_113724894_113726417_113726575_113738109_113738269_113738729_113738800_113757698_113757756_113758658_113758734_113759022
transcript_122486.known	chr2	+	3379	21	FSM	ENSG00000079246.16	ENST00000392132.7	3379	21	0	0	0	0	multi-exon	FALSE	canonical	3	3820	junction_1	365.854014601453	1078	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGCTAATTATTGTCTG	216043190	True	NA	25	True	ATTAAA	-28	NA	216109347	216206293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_216109458_216113015_216113130_216116658_216116843_216117745_216117795_216119042_216119166_216122061_216122254_216125916_216126032_216127535_216127675_216130874_216130988_216132324_216132388_216137087_216137226_216138088_216138180_216141185_216141320_216148082_216148277_216160067_216160162_216161978_216162049_216190224_216190335_216192638_216192736_216194918_216194987_216204321_216204397_216205187
transcript_122487.known	chr2	-	4903	4	FSM	ENSG00000144583.5	ENST00000273067.5	4903	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	3.77123616632825	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGTCCCTTTCCATATG	-216372437	True	NA	-2	True	AATAAA	-17	NA	216372483	216257864	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_216259680_216277671_216277865_216283573_216283730_216369744
transcript_122489.known	chr2	+	3201	18	FSM	ENSG00000138375.13	ENST00000357276.9	3201	18	0	0	0	0	multi-exon	FALSE	canonical	1	40	junction_5	24.4687499309505	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGAGCTTCTCTTGCC	216411652	True	NA	25	True	AATAAA	-22	NA	216412483	216483053	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_216412649_216413855_216413893_216414646_216415516_216416256_216416308_216420298_216420533_216423632_216423684_216428595_216428783_216432717_216432869_216435337_216435497_216438419_216438486_216447017_216447159_216450845_216451065_216464596_216464668_216467943_216468047_216475268_216475452_216477108_216477210_216478202_216478300_216482737
transcript_12249.nic	chr1	-	2494	13	ISM	ENSG00000116793.16	ENST00000357783.6	2747	15	-99	1942	-86	0	5prime_fragment	FALSE	canonical	3	33	junction_12	58.4230262824513	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGATATTTGTGGATTT	NA	False	NA	-8	True	AATAAA	-16	NA	113759575	113705764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_113706163_113706593_113706723_113710253_113710476_113711745_113711836_113711939_113712114_113713278_113713439_113724758_113724894_113726417_113726575_113738109_113738269_113738729_113738800_113757698_113757756_113758658_113758849_113759022
transcript_122491.nic	chr2	+	3174	18	NIC	ENSG00000138375.13	novel	3201	18	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	1	16	junction_1	30.2241911406047	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGAGCTTCTCTTGCC	216411634	True	NA	25	True	AATAAA	-22	NA	216412465	216483053	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_216412604_216413855_216413893_216414646_216415516_216416256_216416308_216420298_216420533_216423632_216423684_216428595_216428783_216432717_216432869_216435337_216435497_216438419_216438486_216447017_216447159_216450845_216451065_216464596_216464668_216467943_216468047_216475268_216475452_216477108_216477210_216478202_216478300_216482737
transcript_122493.known	chr2	+	3056	18	FSM	ENSG00000138375.13	ENST00000358207.9	3056	18	0	0	0	0	multi-exon	FALSE	canonical	1	34	junction_1	27.2848615136685	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAATTGAAATAAAATAAT	216412654	False	NA	4	True	AATAAA	-17	NA	216412742	216483017	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_216412799_216413855_216413893_216414646_216415516_216416256_216416308_216420298_216420533_216423632_216423684_216428595_216428783_216432717_216432869_216435337_216435497_216438419_216438486_216447017_216447159_216450845_216451065_216464596_216464668_216467943_216468047_216475268_216475452_216477108_216477210_216478202_216478300_216482737
transcript_122508.known	chr2	+	2431	15	FSM	ENSG00000138375.13	ENST00000392128.6	2431	15	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_7	34.5519425603522	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAATTGAAATAAAATAAT	216414061	False	NA	4	True	AATAAA	-17	NA	216415112	216483017	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_216415516_216416256_216416308_216420298_216420533_216423632_216423684_216428595_216428783_216432717_216432869_216435337_216435497_216447017_216447159_216450845_216451065_216464596_216464668_216467943_216468047_216475268_216475452_216477108_216477210_216478202_216478300_216482737
transcript_122512.known	chr2	+	2992	4	FSM	ENSG00000197756.10	ENST00000491306.6	2992	4	0	0	0	0	multi-exon	FALSE	canonical	3	8630	junction_1	1903.05882433752	2475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGCCATTTCATTGTATC	216378199	True	NA	-64	True	TATAAA	-26	NA	216498843	216504086	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_216498878_216499269_216499399_216499948_216500032_216501340
transcript_122513.known	chr2	+	425	4	FSM	ENSG00000197756.10	ENST00000600880.5	425	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	5204.5068503707	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCAAGATCATGCCTCAT	216378205	True	NA	NA	False	NA	NA	NA	216498849	216529454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_216498878_216499269_216499399_216499948_216500032_216529269
transcript_122514.known	chr2	+	495	4	FSM	ENSG00000197756.10	ENST00000446558.5	495	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	5234.1334420216	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAACCTTTACTCCTATAC	216378210	True	NA	13	True	AATATA	-21	NA	216498854	216579180	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_216498878_216499269_216499399_216499948_216500032_216578920
transcript_122515.known	chr2	+	1701	3	FSM	ENSG00000197756.10	ENST00000490649.1	1701	3	0	0	0	0	multi-exon	FALSE	canonical	3	8630	junction_1	1952	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTGGCTTGTTAACTT	216378180	True	NA	17	True	AATAAA	-23	NA	216498824	216501467	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_216498878_216499269_216499399_216499948
transcript_122518.known	chr2	+	742	3	FSM	ENSG00000197756.10	ENST00000359681.3	742	3	0	0	0	0	multi-exon	FALSE	canonical	3	12534	junction_1	127	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTGGCTTGTTAACTT	216378222	True	NA	17	True	AATAAA	-23	NA	216498866	216501467	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_216499399_216499948_216500032_216501340
transcript_122525.nnic	chr2	+	1196	4	NNC	ENSG00000115457.10	novel	751	3	NA	NA	120	0	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_1	5051.25231996977	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTCTTTTGCCTGAG	216632904	False	NA	16	True	ATTAAA	-16	NA	216632947	216664436	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_216633276_216660556_216660787_216661857_216661999_216663939
transcript_122526.known	chr2	+	1414	4	FSM	ENSG00000115457.10	ENST00000233809.9	1414	4	0	0	0	0	multi-exon	FALSE	canonical	3	10277	junction_1	287.964503985397	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTCTTTTGCCTGAG	216585187	True	NA	16	True	ATTAAA	-16	NA	216633419	216664436	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_216633966_216660556_216660787_216661857_216661999_216663939
transcript_122536.known	chr2	+	262	4	FSM	ENSG00000180871.8	ENST00000449014.5	262	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGTGAAGATCTTAGTAA	218125668	True	NA	NA	False	NA	NA	NA	218125704	218134846	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218125782_218126290_218126354_218129313_218129366_218134776
transcript_122545.known	chr2	+	1410	11	FSM	ENSG00000163466.16	ENST00000315717.10	1410	11	0	0	0	0	multi-exon	FALSE	canonical	3	2761	junction_1	271.588457044846	1371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGAATTTGCTGGGTTT	218194429	True	NA	14	True	AATAAA	-19	NA	218217188	218254348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218217255_218217462_218217545_218225919_218225955_218228737_218228851_218234351_218234398_218238663_218238851_218239390_218239485_218245419_218245547_218249363_218249465_218249820_218249922_218253890
transcript_122557.nic	chr2	+	1011	10	ISM	ENSG00000163466.16	ENST00000315717.10	1410	11	-72	4440	-24	-4200	5prime_fragment	TRUE	canonical	3	2761	junction_1	278.891854787239	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAACAATCACGTAAGTT	218194357	True	NA	NA	False	AAAAAG	-4	NA	218217116	218249908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_218217255_218217462_218217545_218225919_218225955_218228737_218228851_218234351_218234398_218238663_218238851_218239390_218239485_218245419_218245547_218249363_218249465_218249820
transcript_12258.nic	chr1	-	1157	4	NIC	ENSG00000116793.16	novel	956	3	NA	NA	-182	308	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	42.4996732013579	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGCAATGCAGGAATCATA	NA	False	NA	NA	False	AAAAAG	-15	NA	113759671	113749213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_113749590_113757698_113757756_113758658_113758734_113759022
transcript_122581.known	chr2	+	1039	5	FSM	ENSG00000163466.16	ENST00000489598.5	1039	5	0	0	0	0	multi-exon	FALSE	canonical	3	2761	junction_1	183.388078947351	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATTGGAACATAATATTT	218194387	True	NA	NA	False	NA	NA	NA	218217146	218235052	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218217255_218217462_218217545_218225919_218225955_218228737_218228851_218234351
transcript_122584.known	chr2	+	1605	10	FSM	ENSG00000163466.16	ENST00000295685.14	1605	10	0	0	0	0	multi-exon	FALSE	canonical	3	3052	junction_2	215.024029664904	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGGGTTTCTGGACTG	218194450	True	NA	22	True	AATAAA	-27	NA	218217209	218254356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218217545_218225919_218225955_218228737_218228851_218234351_218234398_218238663_218238851_218239390_218239485_218245419_218245547_218249363_218249465_218249820_218249922_218253890
transcript_122587.known	chr2	-	1804	11	FSM	ENSG00000127837.10	ENST00000444053.5	1804	11	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_10	323.174890732557	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGAGTCTGTGTGGATTT	-218257692	True	NA	-7	True	AATAAA	-15	NA	218270178	218264128	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_218264609_218265019_218265175_218265370_218265462_218265578_218265683_218265830_218265947_218266063_218266148_218266442_218266588_218266846_218266987_218267493_218267614_218269381_218269538_218269965
transcript_122588.known	chr2	-	1833	10	FSM	ENSG00000127837.10	ENST00000489767.5	1833	10	0	0	0	0	multi-exon	FALSE	canonical	3	1131	junction_1	33.0469176388979	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGAGATACTAGTTAAAG	-218257630	True	NA	-61	True	NA	NA	NA	218270116	218264182	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_218264609_218265019_218265175_218265370_218265462_218265578_218265947_218266063_218266148_218266442_218266588_218266846_218266987_218267493_218267614_218269381_218269535_218269965
transcript_12259.nic	chr1	-	1176	4	NIC	ENSG00000116793.16	novel	956	3	NA	NA	-86	308	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	48.7920758593715	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGCAATGCAGGAATCATA	NA	False	NA	NA	False	AAAAAG	-15	NA	113759575	113749213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_113749590_113757698_113757756_113758658_113758849_113759022
transcript_122592.known	chr2	-	2270	8	FSM	ENSG00000127837.10	ENST00000475678.5	2270	8	0	0	0	0	multi-exon	FALSE	canonical	3	1131	junction_1	37.2268281578471	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGAGTCTGTGTGGATT	-218270078	False	NA	-8	True	AATAAA	-14	NA	218270088	218264129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_218264609_218265019_218265175_218265370_218265462_218265578_218266588_218266846_218266987_218267493_218267614_218269381_218269535_218269965
transcript_12260.known	chr1	-	956	3	FSM	ENSG00000116793.16	ENST00000493212.1	956	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	52	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATCAGAGTCTGGTGA	-113758273	True	NA	NA	False	NA	NA	NA	113759489	113749521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_113749590_113757698_113757756_113758658
transcript_122603.known	chr2	-	1761	10	FSM	ENSG00000127837.10	ENST00000420660.5	1761	10	0	0	0	0	multi-exon	FALSE	canonical	3	1131	junction_1	31.7668979044089	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAATGTAAATAAAA	-218269730	False	12486	-40	True	NA	NA	NA	218269740	218264161	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_218264609_218265019_218265175_218265370_218265462_218265578_218265683_218265830_218265947_218266063_218266148_218266442_218266588_218266846_218266987_218267493_218267614_218269381
transcript_122607.known	chr2	-	2292	12	FSM	ENSG00000135926.15	ENST00000258412.8	2292	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	38.4787158081963	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTATGGCTCCAGGAGT	-218290944	True	NA	-3	True	AATAAA	-22	NA	218292503	218274196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_218275622_218276025_218276080_218277003_218277100_218277365_218277454_218277632_218277671_218277934_218277975_218278514_218278566_218279037_218279092_218279288_218279354_218280025_218280127_218281939_218282182_218292465
transcript_122608.known	chr2	-	1251	11	FSM	ENSG00000135926.15	ENST00000445635.5	1251	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	40.0299887584296	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACATAGGCCATTATCCT	-218290954	True	NA	NA	False	NA	NA	NA	218292513	218275005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_218275622_218276025_218276080_218277003_218277100_218277365_218277454_218277632_218277671_218277934_218277975_218278514_218278566_218279037_218279092_218279288_218279354_218280025_218280127_218292465
transcript_122610.known	chr2	+	2991	9	FSM	ENSG00000127838.15	ENST00000258362.7	2991	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	5.78251675311019	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTGATCACCCAACAGCT	NA	False	NA	19	True	AATAAA	-28	NA	218323172	218346791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218323432_218339782_218339899_218340028_218340142_218340727_218340787_218341533_218341627_218341980_218342145_218343499_218343587_218344454_218344571_218344807
transcript_122619.known	chr2	+	758	3	FSM	ENSG00000127838.15	ENST00000248451.7	758	3	0	0	0	0	multi-exon	FALSE	canonical	3	1088	junction_1	106	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGTCTGGGTTTGTGAGT	218270372	False	NA	26	True	AATAAA	-27	NA	218270391	218272947	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218270603_218271380_218271550_218272569
transcript_122622.known	chr2	-	480	3	FSM	ENSG00000225062.1	ENST00000441749.1	480	3	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	3.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCTGTGGTGTTTTGT	-218367683	True	NA	-3	True	AATATA	-16	NA	218367835	218366664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_218366799_218366926_218367028_218367590
transcript_122625.known	chr2	+	2525	7	FSM	ENSG00000144579.8	ENST00000273062.7	2525	7	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_2	6.81705377873919	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTTCTGTGGTTATTG	218399802	True	NA	13	True	ACTAAA	-19	NA	218399867	218405941	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218400158_218401563_218401713_218402110_218402216_218402348_218402406_218403034_218403128_218403231_218403418_218404296
transcript_122626.known	chr2	+	842	7	FSM	ENSG00000144579.8	ENST00000428361.5	842	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.92331709773613	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAAGACTGCCCAGGCCT	218400178	False	NA	NA	False	NA	NA	NA	218400307	218404479	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218400380_218401563_218401713_218402113_218402216_218402348_218402406_218403034_218403128_218403231_218403418_218404296
transcript_122629.known	chr2	-	8022	26	FSM	ENSG00000135913.11	ENST00000258399.8	8022	26	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_7	7.22041550050965	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTTGACTGTTATTTC	-218565401	True	NA	0	True	ATTAAA	-17	NA	218568351	218450250	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_218455018_218455579_218455719_218457091_218457162_218459789_218459906_218463305_218463367_218466009_218466177_218474629_218474886_218476839_218476982_218479649_218479716_218482069_218482235_218485663_218485744_218488303_218488422_218495759_218495951_218497733_218497858_218498025_218498158_218509978_218510141_218529955_218530041_218534608_218534707_218546220_218546299_218546918_218547092_218549808_218549910_218553552_218553725_218558497_218558678_218560819_218560884_218562672_218562814_218568177
transcript_12263.known	chr1	-	2742	11	FSM	ENSG00000134262.13	ENST00000256658.8	2742	11	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_9	21.9410574038719	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATAGGGGTCATCATTTG	-113905031	False	NA	-2	True	ATTAAA	-20	NA	113905070	113894747	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_113895493_113895756_113896039_113896257_113896466_113897839_113897944_113898717_113898802_113899903_113900401_113901235_113901384_113901754_113901886_113902637_113902863_113904604_113904794_113904941
transcript_122630.known	chr2	-	3353	26	FSM	ENSG00000135913.11	ENST00000418019.5	3353	26	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_24	11.0463749710029	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAGGGCCAAACCAAAAGA	-218565341	True	NA	NA	False	NA	NA	NA	218568291	218454814	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_218455018_218455579_218455719_218457091_218457162_218459789_218459906_218463305_218463367_218466009_218466177_218474629_218474886_218476839_218476982_218479649_218479716_218482069_218482235_218485663_218485744_218488303_218488422_218495759_218495951_218497733_218497858_218498025_218498158_218509978_218510141_218529955_218530041_218534608_218534707_218546220_218546299_218546918_218547092_218549808_218549910_218553552_218553725_218558497_218558678_218560819_218560884_218562717_218562814_218568177
transcript_122631.known	chr2	-	5019	26	FSM	ENSG00000135913.11	ENST00000454775.5	5019	26	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_23	10.6473658714257	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAACAAAAAAAAC	-218565375	True	NA	NA	False	ATTAAA	-8	NA	218568325	218453267	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_218455018_218455579_218455719_218457091_218457162_218459789_218459906_218463305_218463367_218466009_218466177_218474629_218474886_218476839_218476982_218479649_218479716_218482069_218482235_218485663_218485744_218488303_218488422_218495759_218495951_218497733_218497858_218498025_218498158_218509978_218510141_218529955_218530041_218534608_218534707_218546220_218546299_218546918_218547092_218549808_218549910_218553552_218553725_218558497_218558718_218560819_218560884_218562672_218562814_218568177
transcript_122636.known	chr2	+	6500	20	FSM	ENSG00000127831.11	ENST00000248444.10	6500	20	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	3.1172827147286	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCACTCAGACTGCAGT	218418902	True	NA	NA	False	NA	NA	NA	218419122	218453295	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218419169_218423767_218423854_218424276_218424352_218425614_218425812_218427964_218428074_218428226_218428338_218429284_218429488_218429596_218429676_218429848_218429948_218430724_218430879_218431856_218431958_218432045_218432184_218432792_218432952_218434525_218434706_218435288_218435435_218436481_218436627_218437123_218437313_218438657_218438727_218440721_218440863_218449222
transcript_122647.known	chr2	+	1126	8	FSM	ENSG00000144580.14	ENST00000295701.9	1126	8	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_7	46.3324279263565	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAGTAAACTATTGAACC	218557695	True	NA	-1	True	AATAAA	-18	NA	218568874	218593842	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218568979_218580560_218580741_218582970_218583087_218584611_218584722_218587585_218587696_218592303_218592403_218592615_218592708_218593527
transcript_122649.known	chr2	+	3820	8	FSM	ENSG00000144580.14	ENST00000273064.11	3820	8	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_7	35.4700218350594	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGAATAGGAAACCTTAG	218557659	True	NA	NA	False	NA	NA	NA	218568838	218597080	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218568979_218580560_218580741_218582970_218583087_218584611_218584722_218587585_218587696_218592303_218592403_218592615_218592708_218594107
transcript_122655.known	chr2	+	3259	9	FSM	ENSG00000144580.14	ENST00000542068.5	3259	9	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_8	69.268386548266	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAATTTTTCCTTTAC	218568622	False	NA	65	True	AATAAA	-19	NA	218568707	218596424	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218568979_218580560_218580741_218582970_218583087_218584611_218584722_218587585_218587696_218592303_218592403_218592615_218592708_218594107_218596299_218596334
transcript_122657.known	chr2	+	1525	9	FSM	ENSG00000074582.15	ENST00000392110.6	1525	9	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	86.4102677637328	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCTCTCTCATCTCCC	218657332	True	NA	18	True	AATAAA	-14	NA	218659713	218663442	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218659744_218660036_218660167_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_122659.known	chr2	+	1636	9	FSM	ENSG00000074582.15	ENST00000392111.7	1636	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	86.4102677637328	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTCTCTCATCTCCCT	218657301	True	NA	19	True	AATAAA	-15	NA	218659682	218663443	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218659744_218660036_218660246_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_122661.nic	chr2	+	1531	9	NIC	ENSG00000074582.15	novel	2015	8	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	85.4465293326768	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGCTCTCTCATCTCC	218657310	True	NA	17	True	AATAAA	-13	NA	218659691	218663441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_218659744_218660306_218660422_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_122663.known	chr2	+	1483	9	FSM	ENSG00000074582.15	ENST00000439945.5	1483	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	83.8331676605387	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTCCTCCTCTAGCTCA	218657378	True	NA	-20	True	NA	NA	NA	218659759	218663404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218659801_218660306_218660422_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_122669.known	chr2	+	1427	8	FSM	ENSG00000074582.15	ENST00000359273.8	1427	8	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	60.6458437763623	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTCTCTCATCTCCCT	218657301	True	NA	19	True	AATAAA	-15	NA	218659682	218663443	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218659744_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_12267.known	chr1	-	3173	10	FSM	ENSG00000134262.13	ENST00000369569.6	3173	10	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_9	21.5767364435763	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCGAATCCAGAATGGGAA	-113904760	False	NA	NA	False	AATAAA	-19	NA	113904799	113894193	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_113895493_113895756_113896039_113896257_113896466_113897839_113897944_113898717_113898802_113899903_113900401_113901235_113901384_113901754_113901886_113902637_113902863_113904604
transcript_122676.known	chr2	+	1430	8	FSM	ENSG00000074582.15	ENST00000412366.5	1430	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	74.4747594552568	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTCTCTCATCTCCCT	218657355	True	NA	19	True	AATAAA	-15	NA	218659736	218663443	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218659801_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_122678.known	chr2	+	2015	8	FSM	ENSG00000074582.15	ENST00000431802.5	2015	8	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	64.8854563749042	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCTCTCTCATCTCCC	218657390	True	NA	18	True	AATAAA	-14	NA	218659771	218663442	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218660422_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_122683.nnic	chr2	+	907	6	NIC	ENSG00000074582.15	novel	1427	8	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_1	87.2454010249251	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGCTCTCTCATCTCC	218657310	True	NA	17	True	AATAAA	-13	NA	218659691	218663441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_218659744_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_122686.known	chr2	-	1477	10	FSM	ENSG00000163481.8	ENST00000295704.7	1477	10	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_3	16.0208197875972	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTTTCTTTGCTTAGC	-218669191	True	NA	-35	True	AATAAA	-15	NA	218672002	218663891	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_218664536_218664738_218664874_218665154_218665248_218665915_218666060_218666158_218666231_218667911_218667982_218668078_218668147_218668238_218668342_218668604_218668680_218671929
transcript_122687.nic	chr2	-	1441	10	NIC	ENSG00000163481.8	novel	1477	10	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_7	82.451482179402	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTTTCTTTGCTTAGC	-218669195	True	NA	-35	True	AATAAA	-15	NA	218672006	218663891	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_218664536_218664738_218664874_218665154_218665248_218665915_218666060_218666158_218666231_218667911_218667982_218668078_218668147_218668278_218668342_218668604_218668680_218671929
transcript_1227.known	chr1	-	2984	20	FSM	ENSG00000008128.23	ENST00000404249.8	2984	20	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_16	60.8659122972653	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGTCGTCCTTTGAGTG	-1724341	False	NA	NA	False	ATTAAA	-21	NA	1724357	1702378	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1703000_1703079_1703270_1703475_1703625_1703823_1703941_1704038_1704147_1704222_1704345_1704549_1704656_1704903_1705026_1705641_1705733_1707408_1707585_1708179_1708246_1708793_1708953_1709037_1709134_1709517_1709641_1712263_1712401_1716345_1716479_1719327_1719456_1721595_1721712_1722707_1722832_1724257
transcript_122704.known	chr2	+	4873	27	FSM	ENSG00000163482.12	ENST00000295709.8	4873	27	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	20.6858726053262	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTGGTCTGGCAGCTTA	218671762	True	NA	14	True	NA	NA	NA	218672085	218702715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218672216_218672740_218672914_218673624_218673766_218673878_218673957_218675342_218675474_218676028_218676279_218679167_218679262_218679559_218679730_218679892_218680081_218680602_218680703_218685084_218685229_218688696_218688877_218689858_218689957_218690449_218690556_218692142_218692294_218692582_218692711_218693239_218693345_218693722_218693822_218693894_218693984_218694263_218694328_218694524_218694636_218696526_218696602_218697038_218697214_218697462_218697611_218697853_218698002_218698601_218699349_218701865
transcript_122707.known	chr2	+	4821	27	FSM	ENSG00000163482.12	ENST00000392105.7	4821	27	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	20.954621300471	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAAGATCCTGGTCTGGC	NA	False	NA	8	True	NA	NA	NA	218672068	218702709	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218672216_218672740_218672914_218673624_218673766_218673878_218673957_218675342_218675474_218676028_218676279_218679167_218679262_218679559_218679730_218679892_218680081_218680602_218680703_218685084_218685229_218688696_218688877_218689858_218689957_218690449_218690556_218692142_218692294_218692582_218692711_218693239_218693345_218693722_218693822_218693894_218693984_218694263_218694328_218694524_218694636_218696589_218696602_218697038_218697214_218697462_218697611_218697853_218698002_218698601_218699349_218701865
transcript_122711.known	chr2	+	4721	27	FSM	ENSG00000163482.12	ENST00000440309.5	4721	27	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	20.507611518105	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTGAAGCTCCCAGGAC	218672195	False	NA	11	True	AATAAA	-15	NA	218672295	218702623	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218672366_218672740_218672914_218673624_218673766_218673878_218673957_218675342_218675474_218676028_218676279_218679167_218679262_218679559_218679730_218679892_218680081_218680602_218680703_218685084_218685229_218688696_218688877_218689858_218689957_218690449_218690556_218692142_218692294_218692582_218692711_218693239_218693345_218693722_218693822_218693894_218693984_218694263_218694328_218694524_218694636_218696526_218696602_218697038_218697214_218697462_218697611_218697853_218698002_218698601_218699349_218701865
transcript_12273.known	chr1	-	2703	8	NNC	ENSG00000081019.14	novel	3772	8	NA	NA	14	506	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	31.5491194611753	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATTAAAAAAAAAATCTAAA	-113810030	True	NA	-24	True	TTTAAA	-17	NA	113812275	113765341	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_113766454_113767098_113767208_113768221_113768390_113777209_113777353_113777670_113777809_113797362_113798037_113811709_113812041_113812247
transcript_122741.known	chr2	+	5007	20	FSM	ENSG00000135912.11	ENST00000392102.6	5007	20	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_6	24.7568787833081	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGACTGAGTGAACTGTA	218705229	True	NA	7	True	AATAAA	-1	NA	218710834	218755416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218711038_218727268_218727348_218737578_218739164_218740057_218740168_218740520_218740585_218745108_218745234_218745690_218745802_218746154_218746232_218747002_218747195_218747289_218747373_218747596_218747726_218748104_218748228_218748835_218748935_218749252_218749388_218750008_218750147_218751703_218751807_218752762_218752974_218753114_218753186_218753583_218753670_218754133
transcript_122742.nic	chr2	+	4249	20	NIC	ENSG00000135912.11	novel	5007	20	NA	NA	-62	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_19	49.2985140780603	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCCATGTGTGGTTTGT	218710742	True	NA	24	True	TATAAA	-24	NA	218710772	218754693	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_218711038_218727268_218727348_218737578_218739164_218740057_218740168_218740520_218740585_218745108_218745234_218745690_218745802_218746154_218746232_218747002_218747195_218747289_218747373_218747596_218747726_218748104_218748228_218748835_218748935_218749252_218749388_218750008_218750147_218751703_218751807_218752762_218752974_218753114_218753186_218753583_218753670_218754230
transcript_122751.nic	chr2	+	4215	19	NIC	ENSG00000135912.11	novel	5007	20	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	47.3735158078857	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCCATGTGTGGTTTGT	218705219	True	NA	24	True	TATAAA	-24	NA	218710824	218754693	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_218711038_218737578_218739164_218740057_218740168_218740520_218740585_218745108_218745234_218745690_218745802_218746154_218746232_218747002_218747195_218747289_218747373_218747596_218747726_218748104_218748228_218748835_218748935_218749252_218749388_218750008_218750147_218751703_218751807_218752762_218752974_218753114_218753186_218753583_218753670_218754133
transcript_122761.known	chr2	+	1895	9	FSM	ENSG00000135929.9	ENST00000258415.9	1895	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	7.95298686029343	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTTGTCATTCTTTTTG	218782119	True	NA	10	True	AATAAA	-23	NA	218782146	218815293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218782438_218809576_218809768_218812221_218812422_218812551_218812750_218812923_218813097_218814020_218814188_218814379_218814459_218814544_218814758_218814910
transcript_122764.known	chr2	+	2566	7	FSM	ENSG00000135929.9	ENST00000494263.5	2566	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	8.95203266799719	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGACCTTTGTCATTCT	218781505	True	NA	5	True	AATAAA	-18	NA	218781748	218815288	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_218782438_218809576_218809768_218812221_218812422_218812551_218812750_218812923_218813097_218814020_218814758_218814910
transcript_122772.nic	chr2	-	2021	8	NIC	ENSG00000187736.13	novel	2113	9	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_7	50.6464334824259	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAATAATAAATAGCTAAC	-219158678	False	NA	-35	True	AATAAA	-18	NA	219160578	219075328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_219076456_219077245_219077365_219078088_219078207_219146679_219146739_219147656_219147796_219157471_219157685_219158185_219158363_219160509
transcript_122773.known	chr2	-	8020	8	FSM	ENSG00000187736.13	ENST00000356853.10	8020	8	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_5	9.31095470674304	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGCTATTTTCATTTGT	-219158915	True	NA	-8	True	ATTAAA	-18	NA	219160815	219069356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219076456_219077245_219077365_219078088_219078207_219146679_219146739_219147656_219147796_219157471_219157685_219158185_219158363_219160719
transcript_12278.known	chr1	-	2418	7	FSM	ENSG00000081019.14	ENST00000615321.1	2418	7	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_5	9.39266853573691	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTCAAGCATATCTTTT	-113810044	True	NA	NA	False	TATAAA	-18	NA	113812289	113765847	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_113766454_113767098_113767208_113768221_113768390_113777209_113777353_113777670_113777809_113797362_113798037_113811709
transcript_122785.known	chr2	+	4556	9	FSM	ENSG00000144567.11	ENST00000430297.7	4556	9	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	8.35819208920207	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGTGATAATTCTAGTG	219176270	True	NA	NA	False	AATAAA	-20	NA	219178274	219185475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219178634_219178921_219179029_219179732_219179764_219180109_219180246_219180669_219180755_219181061_219181206_219181368_219181464_219181639_219181776_219182012
transcript_122789.known	chr2	+	2533	9	FSM	ENSG00000144567.11	ENST00000273048.2	2533	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	37.5532954612508	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCCTCCCTGACTGTG	219176222	True	NA	23	True	AATAAA	-18	NA	219178226	219183492	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219178634_219178921_219179029_219179732_219179764_219180197_219180246_219180669_219180755_219181061_219181206_219181368_219181464_219181639_219181776_219182012
transcript_122794.known	chr2	-	2019	8	FSM	ENSG00000115649.16	ENST00000360507.10	2019	8	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_5	23.0429944199259	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTGGACTTTTCCTTCT	-219173889	True	NA	-8	True	AATAAA	-15	NA	219176925	219171896	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219173129_219173349_219173468_219174145_219174208_219174777_219174907_219174987_219175109_219175590_219175673_219176222_219176332_219176759
transcript_122799.known	chr2	-	919	7	FSM	ENSG00000115649.16	ENST00000451647.1	919	7	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_4	24.7857485933617	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGGCTGTCCTGCATCCC	-219173862	True	NA	NA	False	AATACA	-8	NA	219176898	219173050	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219173129_219173349_219173468_219174145_219174208_219174777_219175109_219175590_219175673_219176222_219176332_219176759
transcript_1228.known	chr1	-	2419	20	FSM	ENSG00000008128.23	ENST00000358779.9	2419	20	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_7	59.9063905044253	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTCAGCCGGGACCACA	-1721917	True	NA	NA	False	NA	NA	NA	1724324	1702880	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1703000_1703079_1703270_1703475_1703625_1703823_1703941_1704038_1704147_1704222_1704345_1704549_1704656_1704903_1705026_1705641_1705733_1707408_1707585_1708179_1708246_1708793_1708953_1709037_1709134_1709517_1709641_1712263_1712401_1716345_1716479_1719357_1719456_1721595_1721712_1722707_1722832_1724257
transcript_122805.known	chr2	+	944	10	FSM	ENSG00000158552.13	ENST00000409336.5	944	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	45.2297291066587	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGTGGAGGTCGCCCTG	219205574	True	NA	NA	False	NA	NA	NA	219206808	219209418	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219206846_219206966_219207043_219207326_219207422_219207647_219207780_219207886_219208039_219208255_219208349_219208425_219208487_219208571_219208640_219208976_219209050_219209261
transcript_122808.known	chr2	+	1322	9	FSM	ENSG00000158552.13	ENST00000289528.10	1322	9	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_5	20.4068003371425	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTGGTGTGTTTCTCTCT	219205547	True	NA	NA	False	AATAAA	-26	NA	219206781	219209648	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219207043_219207326_219207422_219207647_219207780_219207886_219208039_219208255_219208349_219208425_219208487_219208571_219208640_219208976_219209050_219209261
transcript_122818.known	chr2	-	2980	19	FSM	ENSG00000115657.14	ENST00000265316.9	2980	19	0	0	0	0	multi-exon	TRUE	canonical	3	141	junction_12	32.189638697975	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGATCACTGTGGCTTTG	-219217509	True	NA	-8	True	AATAAA	-14	NA	219218958	219209771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219210047_219210229_219210299_219210380_219210476_219210710_219210824_219210933_219211109_219212386_219212492_219213007_219213066_219213240_219213327_219213438_219213503_219213589_219213667_219213825_219213952_219214120_219214187_219214388_219214499_219214960_219215083_219215996_219216181_219216363_219216466_219216651_219216833_219217669_219217808_219218124
transcript_122820.known	chr2	-	2878	18	FSM	ENSG00000115657.14	ENST00000295750.5	2878	18	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_17	53.8047861932471	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGATCACTGTGGCTTTG	-219217545	True	NA	-8	True	AATAAA	-14	NA	219218994	219209771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219210047_219210229_219210299_219210380_219210476_219210710_219210824_219210933_219211109_219212386_219212492_219213007_219213066_219213240_219213327_219213438_219213503_219213589_219213667_219213825_219213952_219214120_219214187_219214388_219214499_219214960_219215083_219215996_219216181_219216363_219216466_219216651_219216833_219218124
transcript_12284.known	chr1	-	6621	7	FSM	ENSG00000081019.14	ENST00000261441.9	6621	7	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_5	9.39266853573691	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTGTTTCATCACAAAAT	NA	False	NA	NA	False	AATAAA	-22	NA	113812476	113761831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_113766454_113767098_113767208_113768221_113768390_113777209_113777353_113777670_113777809_113797362_113798037_113811709
transcript_122840.nic	chr2	-	3936	17	NIC	ENSG00000198925.12	novel	4025	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_16	99.333383581503	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTTGTTGTCTCGCGC	-219229533	False	NA	-5	True	AATAAA	-16	NA	219229639	219219381	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_219220453_219220746_219220893_219221079_219221303_219222049_219222168_219222271_219222451_219222644_219222894_219223584_219223765_219223868_219224023_219224105_219224855_219225070_219225213_219225410_219225573_219226868_219226934_219227769_219227814_219227921_219228054_219228433_219228486_219229009_219229175_219229534
transcript_12285.known	chr1	+	3755	4	FSM	ENSG00000118655.7	ENST00000650450.2	3755	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	14.522013940528	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGCATTTTTATTTCC	113903502	True	NA	21	True	AATGAA	-15	NA	113905325	113914086	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_113905776_113906995_113907162_113908008_113908192_113911130
transcript_122850.known	chr2	-	4025	16	FSM	ENSG00000198925.12	ENST00000409618.5	4025	16	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_15	75.9961987353461	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTTGTTGTCTCGCGC	-219229262	False	NA	-5	True	AATAAA	-16	NA	219229368	219219381	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219220453_219220746_219220893_219221079_219221303_219222049_219222168_219222271_219222451_219222644_219222894_219223584_219223765_219223868_219224023_219224105_219224855_219225070_219225213_219225410_219225573_219226868_219226934_219227769_219227814_219227921_219228054_219228433_219228486_219229009
transcript_122851.known	chr2	-	3770	16	FSM	ENSG00000198925.12	ENST00000361242.9	3770	16	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_15	56.692935087971	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTTGTCTCGCGCGG	-219225242	True	NA	-3	True	AATAAA	-18	NA	219229636	219219379	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219220453_219220746_219220893_219221079_219221303_219222049_219222168_219222271_219222451_219222644_219222894_219223584_219223765_219223868_219224023_219224105_219224855_219225070_219225213_219225410_219225573_219226868_219226934_219227769_219227814_219227921_219228054_219228433_219228486_219229534
transcript_122859.known	chr2	-	3701	16	FSM	ENSG00000198925.12	ENST00000409033.7	3701	16	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	99.4749326324086	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTTGTCTCGCGCGG	-219225232	True	NA	-3	True	AATAAA	-18	NA	219229626	219219379	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219220453_219220746_219220893_219221079_219221303_219222049_219222168_219222271_219222451_219222644_219222894_219223584_219223765_219223927_219224023_219224105_219224855_219225070_219225213_219225410_219225573_219226868_219226934_219227769_219227814_219227921_219228054_219228433_219228486_219229534
transcript_122866.nic	chr2	-	4148	15	NIC	ENSG00000198925.12	novel	4025	16	NA	NA	51	0	intron_retention	FALSE	canonical	3	17	junction_14	90.4361314826714	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTTGTTGTCTCGCGC	-219229437	False	NA	-5	True	AATAAA	-16	NA	219229543	219219381	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_219220453_219220746_219220893_219221079_219221303_219222049_219222168_219222271_219222451_219222644_219222894_219223584_219223765_219223868_219224023_219224105_219224855_219225070_219225213_219225410_219225573_219226868_219226934_219227769_219227814_219227921_219228054_219229009
transcript_122867.known	chr2	-	3799	15	FSM	ENSG00000198925.12	ENST00000396761.6	3799	15	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_14	75.6443410079737	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTTGTCTCGCGCGG	-219229611	False	NA	-3	True	AATAAA	-18	NA	219229717	219219379	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219220453_219220746_219220893_219221079_219221303_219222049_219222168_219222271_219222451_219222644_219222894_219223584_219223765_219223868_219224023_219224105_219224855_219225070_219225213_219225410_219225573_219226868_219226934_219227769_219227814_219227921_219228054_219229534
transcript_122878.known	chr2	-	2512	14	FSM	ENSG00000198925.12	ENST00000409422.5	2512	14	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_13	93.4963214793904	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGGCTGAGCAGGGTTCC	-219225235	True	NA	NA	False	NA	NA	NA	219229629	219220446	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219220453_219220746_219220893_219221079_219221303_219222049_219222168_219222271_219222451_219222644_219222894_219223584_219223765_219223868_219224023_219224105_219224855_219225070_219225213_219225410_219225573_219226868_219226934_219227769_219227814_219229534
transcript_12288.known	chr1	+	1960	3	FSM	ENSG00000118655.7	ENST00000648795.1	1960	3	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_1	7.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTAACTTAATCTGTTTAA	113903509	True	NA	4	True	ATTAAA	-18	NA	113905332	113912464	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_113905776_113908008_113908192_113911130
transcript_122895.known	chr2	-	2725	17	FSM	ENSG00000163521.16	ENST00000295759.12	2725	17	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_14	3.45902352550543	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCTAGCCCTGTCTTTG	-219245432	False	357	-1	True	ATTAAA	-27	NA	219245444	219236597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219237348_219237511_219237728_219237825_219237958_219238249_219238364_219238494_219238585_219238704_219238780_219239091_219239211_219239410_219239452_219239560_219239683_219239774_219239834_219239919_219240095_219240190_219240286_219242513_219242575_219242767_219242919_219243147_219243315_219243501_219243644_219245228
transcript_122901.nic	chr2	+	2530	14	NIC	ENSG00000163516.14	novel	2540	14	NA	NA	-52	0	combination_of_known_junctions	TRUE	canonical	2	36	junction_2	74.7554593205396	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGTACTTGTACTTACA	NA	False	NA	30	True	AATAAA	-12	NA	219229730	219236649	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_219229901_219230227_219230351_219231927_219232041_219232259_219232363_219232489_219232684_219233078_219233192_219233285_219233434_219233714_219233944_219234132_219234289_219234825_219235313_219235473_219235586_219235707_219235876_219236009_219236096_219236321
transcript_122903.known	chr2	+	2540	14	FSM	ENSG00000163516.14	ENST00000323348.10	2540	14	0	0	0	0	multi-exon	FALSE	canonical	2	155	junction_5	46.7605001972629	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGCCTTTAGTTCCTTA	219225092	True	NA	60	True	AATAAA	-42	NA	219229805	219236679	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219229901_219230227_219230406_219231927_219232041_219232259_219232363_219232489_219232684_219233078_219233192_219233285_219233434_219233714_219233944_219234132_219234289_219234825_219235313_219235473_219235586_219235707_219235876_219236009_219236096_219236321
transcript_122909.known	chr2	+	2940	13	FSM	ENSG00000163516.14	ENST00000477479.5	2940	13	0	0	0	0	multi-exon	FALSE	canonical	2	36	junction_2	75.4644876010491	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAATTTTAATCACAATAAA	219225113	True	NA	-1	True	NA	NA	NA	219229826	219236618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219229901_219230227_219230351_219231927_219232041_219232259_219232363_219232489_219232684_219233078_219233192_219233285_219233434_219233714_219233944_219234132_219235313_219235473_219235586_219235707_219235876_219236009_219236096_219236321
transcript_122926.known	chr2	+	3245	11	FSM	ENSG00000163516.14	ENST00000463792.5	3245	11	0	0	0	0	multi-exon	FALSE	canonical	2	36	junction_2	82.2072989460182	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTACTTGTACTTACATT	219225124	True	NA	32	True	AATAAA	-14	NA	219229837	219236651	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219229901_219230227_219230351_219231927_219232041_219232259_219232363_219232489_219232684_219233078_219233192_219233285_219233434_219233714_219233944_219234132_219235876_219236009_219236096_219236321
transcript_12293.nnic	chr1	-	702	5	Antisense	novelGene_ENSG00000116774.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	82	junction_1	21.4650879336657	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTGTTTGTAATTAATC	-114031452	True	NA	-16	True	ATTAAA	-24	NA	114032210	114014903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr1_-_114015170_114021928_114022043_114022679_114022781_114026725_114026776_114032039
transcript_122935.known	chr2	+	2155	11	FSM	ENSG00000163516.14	ENST00000409849.5	2155	11	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	89.2930568409437	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGAGGCACTGTGGCCTT	219225073	True	NA	50	True	AATAAA	-32	NA	219229786	219236669	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219229901_219232489_219232684_219233078_219233192_219233285_219233434_219233714_219233944_219234132_219234289_219234825_219235313_219235473_219235586_219235707_219235876_219236009_219236096_219236321
transcript_12295.nnic	chr1	-	585	5	Antisense	novelGene_ENSG00000116774.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	36	junction_4	39.9593543491383	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTGTTTGTAATTAATC	-114031514	True	NA	-16	True	ATTAAA	-24	NA	114032272	114014903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr1_-_114015170_114021928_114022043_114022679_114022781_114026725_114026776_114032218
transcript_122950.known	chr2	+	2868	8	FSM	ENSG00000115661.14	ENST00000409638.7	2868	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	11.3317325800297	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGCAGCTGCTTTATTC	NA	False	NA	8	True	AATAAA	-15	NA	219245454	219250337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219245523_219245895_219246086_219246656_219246877_219247112_219247247_219247414_219247536_219247661_219247758_219248192_219248315_219248420
transcript_122954.known	chr2	+	3118	8	FSM	ENSG00000115661.14	ENST00000396738.7	3118	8	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	10.5249945465108	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGCAGCTGCTTTATTC	219243312	True	NA	8	True	AATAAA	-15	NA	219245478	219250337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219245797_219245895_219246086_219246656_219246877_219247112_219247247_219247414_219247536_219247661_219247758_219248192_219248315_219248420
transcript_122967.known	chr2	-	673	4	FSM	ENSG00000127824.15	ENST00000456818.5	673	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	108.52649446103	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTCTACAGCCGTGGTC	-219253133	False	NA	NA	False	AAGAAA	-35	NA	219253145	219251172	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219251324_219251564_219251714_219252007_219252231_219252995
transcript_122968.known	chr2	-	648	4	FSM	ENSG00000127824.15	ENST00000447205.1	648	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	105.237297993102	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCATCTACCCAGCCCCC	-219253342	False	NA	NA	False	AAGAAA	-14	NA	219253354	219251193	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219251324_219251564_219251714_219252007_219252231_219253208
transcript_12297.known	chr1	+	1934	4	FSM	ENSG00000116774.12	ENST00000369551.5	1934	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	199.486006192581	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCCTGTGTTTGTTTGGG	113972795	True	NA	19	True	ATTAAA	-18	NA	113979440	113982254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_113979631_113979974_113980127_113980331_113980618_113980948
transcript_122970.known	chr2	-	2049	4	FSM	ENSG00000127824.15	ENST00000248437.9	2049	4	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_3	12.2292908852294	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTTTGTGATTTCTTTC	-219249050	True	NA	NA	False	ATTAAA	-17	NA	219253918	219249709	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219251324_219251564_219251714_219252007_219252231_219253855
transcript_122971.known	chr2	-	790	3	FSM	ENSG00000127824.15	ENST00000498660.1	790	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	116	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCAAGGATGTCAACGCT	-219249033	True	NA	NA	False	NA	NA	NA	219253901	219250728	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219251324_219251564_219251714_219253855
transcript_122974.known	chr2	-	804	3	FSM	ENSG00000127824.15	ENST00000462806.5	804	3	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_2	14.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCATCTACCCAGCCCCC	-219249048	True	NA	NA	False	AAGAAA	-14	NA	219253916	219251193	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219251714_219252007_219252231_219253855
transcript_122975.known	chr2	+	2486	14	FSM	ENSG00000163516.14	ENST00000410034.7	2486	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	81.9644893523586	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGTACTTGTACTTACA	219225174	True	NA	30	True	AATAAA	-12	NA	219229887	219236649	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219229959_219230227_219230406_219231927_219232041_219232259_219232363_219232489_219232684_219233078_219233192_219233285_219233434_219233714_219233944_219234132_219234289_219234825_219235313_219235473_219235586_219235707_219235876_219236009_219236096_219236321
transcript_122976.known	chr2	+	1493	7	FSM	ENSG00000115661.14	ENST00000409260.5	1493	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	15.2059929706094	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGTTGGTGTAGATCTT	219243725	False	NA	2	True	AATAAA	-6	NA	219245891	219248891	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219246086_219246521_219246877_219247112_219247247_219247414_219247536_219247661_219247758_219248192_219248315_219248420
transcript_122977.known	chr2	-	2574	17	FSM	ENSG00000163521.16	ENST00000392089.6	2574	17	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_16	3.82426463519459	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTAACCCTTG	-219245466	False	NA	NA	False	NA	NA	NA	219245478	219236770	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219237348_219237511_219237728_219237825_219237958_219238249_219238364_219238494_219238585_219238704_219238780_219239091_219239211_219239410_219239452_219239560_219239683_219239774_219239834_219239919_219240095_219240190_219240286_219242513_219242575_219242767_219242919_219243147_219243315_219243501_219243632_219245228
transcript_122981.known	chr2	+	1946	10	FSM	ENSG00000135924.17	ENST00000392086.8	1946	10	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_9	4.07643029507648	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTGTGTTGTGTTCTT	219275603	True	NA	16	True	AATAAA	-18	NA	219279343	219286898	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219279519_219279797_219279899_219280577_219280688_219281717_219281772_219281938_219282062_219282836_219282930_219283132_219283236_219283418_219283490_219284631_219284836_219285986
transcript_122987.known	chr2	+	3072	9	FSM	ENSG00000135924.17	ENST00000336576.10	3072	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	2.29128784747792	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGTGGTGTGTTGTGTT	219275625	True	NA	13	True	AATAAA	-15	NA	219279365	219286895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219279519_219279797_219279899_219280577_219280688_219281717_219281772_219281938_219282062_219282836_219282930_219283132_219283236_219283418_219283490_219284631
transcript_12299.known	chr1	+	1748	3	FSM	ENSG00000116774.12	ENST00000320334.5	1748	3	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_1	23.5	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTCCTGTGTTTGTTTGG	113972828	True	NA	18	True	ATTAAA	-17	NA	113979473	113982253	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_113979631_113980331_113980618_113980948
transcript_122990.known	chr2	-	3612	23	FSM	ENSG00000054356.14	ENST00000295718.7	3612	23	0	0	0	0	multi-exon	TRUE	canonical	2	10	junction_22	3.96472045224664	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGACTCCTACGCATTTC	-219309130	True	NA	2	True	AATAAA	-28	NA	219309401	219289622	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219290298_219290537_219290612_219290825_219290891_219291469_219291524_219294974_219295142_219296225_219296346_219296438_219296517_219296748_219296823_219296984_219297133_219297232_219297434_219297884_219298104_219299046_219299112_219299304_219299385_219299699_219299787_219299984_219300260_219300942_219300978_219301587_219301720_219302136_219302492_219302575_219302838_219303734_219303832_219307443_219307558_219307791_219307843_219309217
transcript_122992.known	chr2	-	3622	22	FSM	ENSG00000054356.14	ENST00000409251.7	3622	22	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_13	5.05794092886713	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGACTCCTACGCATTTC	NA	False	NA	2	True	AATAAA	-28	NA	219309498	219289622	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219290298_219290537_219290612_219290825_219290891_219291469_219291524_219294974_219295142_219296225_219296346_219296438_219296517_219296748_219296823_219296984_219297133_219297232_219297434_219297884_219298104_219299046_219299112_219299304_219299385_219299984_219300260_219300942_219300978_219301587_219301720_219302136_219302492_219302575_219302838_219303734_219303832_219307443_219307558_219307791_219307843_219309217
transcript_122993.nnic	chr2	-	3421	22	NIC	ENSG00000054356.14	novel	3612	23	NA	NA	-27	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_10	4.4451813448057	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGACTCCTACGCATTTC	-219309158	True	NA	2	True	AATAAA	-28	NA	219309429	219289622	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_219290298_219290537_219290612_219290825_219290891_219291469_219291524_219294974_219295142_219296225_219296346_219296438_219296517_219296748_219296823_219296984_219297133_219297232_219297434_219299046_219299112_219299304_219299385_219299699_219299787_219299984_219300260_219300942_219300978_219301587_219301720_219302136_219302492_219302575_219302838_219303734_219303832_219307443_219307558_219307791_219307843_219309217
transcript_122998.nnic	chr2	+	1121	5	NNC	ENSG00000230432.1	novel	311	3	NA	NA	-90	0	intron_retention	FALSE	canonical	2	12	junction_2	4.96865172858795	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGATTGTTATTATCATTA	219298743	True	NA	7	True	AATAAA	-19	NA	219298911	219304130	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_219299129_219299625_219300171_219300374_219300425_219303676_219303852_219303996
transcript_123.known	SIRV3	+	436	3	FSM	SIRV3A	SIRV305	436	3	0	0	0	0	multi-exon	FALSE	canonical	3	1806	junction_2	921.5	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAATCTTAATAGACGATT	NA	False	NA	NA	False	NA	NA	NA	4003	6718	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV3_+_4081_4568_4780_6570
transcript_123002.known	chr2	+	311	3	FSM	ENSG00000230432.1	ENST00000417355.1	311	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGATTGTTATTATCATTA	219298833	True	NA	7	True	AATAAA	-19	NA	219299001	219304130	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219299129_219300374_219300425_219303996
transcript_123006.known	chr2	-	1657	15	FSM	ENSG00000123992.20	ENST00000373963.5	1657	15	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_13	158.892082488559	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTCCGTGCTACGCTTA	-219381492	True	NA	-3	True	ATTAAA	-16	NA	219387929	219374195	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219374343_219374854_219375023_219381334_219381437_219381544_219381585_219381978_219382140_219383130_219383215_219384365_219384444_219385423_219385532_219385630_219385707_219385967_219386099_219386285_219386412_219386664_219386779_219386891_219386949_219387069_219387164_219387758
transcript_123007.known	chr2	-	3825	15	FSM	ENSG00000123992.20	ENST00000273075.9	3825	15	0	0	0	0	multi-exon	FALSE	canonical	3	624	junction_5	36.3551079980657	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATATCATTGTACATTTG	-219381475	True	NA	-14	True	GATAAA	-5	NA	219387912	219372042	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219374343_219374854_219375023_219381334_219381437_219381544_219381585_219381978_219382140_219383130_219383215_219384365_219384444_219385423_219385532_219385630_219385707_219385967_219386099_219386285_219386412_219386664_219386779_219386891_219386981_219387069_219387164_219387758
transcript_12301.known	chr1	+	1961	3	FSM	ENSG00000116774.12	ENST00000393300.6	1961	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	217	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCCTGTGTTTGTTTGGG	113972745	True	NA	19	True	ATTAAA	-18	NA	113979390	113982254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_113979631_113980202_113980618_113980948
transcript_123018.known	chr2	-	1875	15	FSM	ENSG00000123992.20	ENST00000373966.5	1875	15	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_14	176.106878494456	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTCCGTGCTACGCTTA	-219381495	True	NA	-3	True	ATTAAA	-16	NA	219387932	219374195	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219374343_219374854_219375023_219381334_219381437_219381544_219381585_219381978_219382140_219383130_219383215_219384365_219384444_219385423_219385532_219385630_219385707_219385967_219386099_219386285_219386412_219386664_219386779_219386891_219386981_219387069_219387164_219387575
transcript_12302.known	chr1	+	2063	2	FSM	ENSG00000116774.12	ENST00000491700.1	2063	2	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCCTGTGTTTGTTTGGG	113972845	True	NA	19	True	ATTAAA	-18	NA	113979490	113982254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_113979631_113980331
transcript_12303.known	chr1	+	2119	1	FSM	ENSG00000282048.1	ENST00000632517.1	2119	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGGACTCACCTGGAA	114029064	True	NA	27	True	AATAAA	-16	NA	114032392	114034511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_114032400_114034500
transcript_123055.known	chr2	-	1610	8	FSM	ENSG00000123992.20	ENST00000460963.5	1610	8	0	0	0	0	multi-exon	FALSE	canonical	3	634	junction_2	31.7747171987608	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAACAAAA	-219381355	True	NA	NA	False	NA	NA	NA	219387792	219384585	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219385532_219385630_219385707_219385967_219386099_219386285_219386412_219386664_219386779_219386891_219386981_219387069_219387164_219387758
transcript_123062.known	chr2	-	565	5	FSM	ENSG00000123992.20	ENST00000523527.5	565	5	0	0	0	0	multi-exon	FALSE	canonical	3	636	junction_3	31.5792653492763	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGGCAGTCTGGTCAGAG	-219381381	True	NA	NA	False	NA	NA	NA	219387818	219386203	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219386412_219386664_219386779_219386891_219386981_219387069_219387164_219387758
transcript_123067.known	chr2	+	2243	9	FSM	ENSG00000175084.13	ENST00000373960.4	2243	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4.55350140002175	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAAGCTGGCCCCTGTTGT	NA	False	NA	4	True	AATAAA	-16	NA	219418376	219426734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219419041_219420094_219420156_219420250_219420347_219420494_219420657_219420827_219420954_219421339_219421561_219423776_219423821_219425662_219425746_219425948
transcript_123068.known	chr2	+	1631	8	FSM	ENSG00000175084.13	ENST00000477226.6	1631	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	2.9277002188456	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAAGCTGGCCCCTGTTGT	219419964	True	NA	4	True	AATAAA	-16	NA	219420042	219426734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219420156_219420250_219420347_219420494_219420657_219420827_219420954_219421339_219421561_219423776_219423821_219425662_219425746_219425948
transcript_123073.known	chr2	+	1501	13	FSM	ENSG00000144591.20	ENST00000373908.5	1501	13	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	90.5799217388833	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAGCACAGACTGTACTT	219494732	True	NA	12	True	AATAAA	-16	NA	219498905	219506988	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219498939_219499960_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
transcript_123078.known	chr2	+	1522	13	FSM	ENSG00000144591.20	ENST00000313597.10	1522	13	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	67.2298606771326	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGCACAGACTGTACTTA	219494717	True	NA	13	True	AATAAA	-17	NA	219498890	219506989	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219498939_219499955_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
transcript_123081.known	chr2	+	1783	13	FSM	ENSG00000144591.20	ENST00000443704.5	1783	13	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_9	125.966568536612	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGACTCCTGGGTTTTCTC	219494731	True	NA	-43	True	NA	NA	NA	219498904	219506933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219499255_219499960_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505694_219505762_219505979_219506073_219506253_219506423_219506697
transcript_123082.known	chr2	+	1823	13	FSM	ENSG00000144591.20	ENST00000358215.8	1823	13	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	87.7044832884208	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGCACAGACTGTACTTA	219494727	True	NA	13	True	AATAAA	-17	NA	219498900	219506989	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219499255_219499960_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
transcript_123084.known	chr2	+	1797	13	FSM	ENSG00000144591.20	ENST00000622191.2	1797	13	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	99.2651821581409	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAATAAACCCCGTGAACC	219494733	True	NA	-12	True	NA	NA	NA	219498906	219506964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219499255_219499955_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
transcript_123085.known	chr2	+	1537	13	FSM	ENSG00000144591.20	ENST00000683386.1	1537	13	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	135.148966165323	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAATAAACCCCGTGAACC	219494932	False	NA	-12	True	NA	NA	NA	219499105	219506964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219499255_219499955_219500016_219500120_219500219_219501475_219501580_219501911_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
transcript_123087.nic	chr2	+	3284	12	NIC	ENSG00000072195.15	novel	3379	11	NA	NA	-23	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_5	27.374054193254	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGGTGTGTTGTGTTTT	219440216	True	NA	10	True	AATAAA	-15	NA	219441992	219466860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_219442084_219443107_219443151_219444029_219444060_219444652_219444743_219444824_219444985_219447973_219449272_219451135_219451280_219451624_219451808_219461881_219462058_219462297_219462387_219464432_219464609_219466056
transcript_123092.known	chr2	+	1630	12	FSM	ENSG00000144591.20	ENST00000373917.7	1630	12	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	70.2157242637595	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTCCTGGGTTTTCTCCC	219494714	True	NA	-41	True	NA	NA	NA	219498887	219506935	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219498939_219499955_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505762_219505979_219506073_219506253_219506423_219506697
transcript_123093.known	chr2	+	1814	12	FSM	ENSG00000144591.20	ENST00000683241.1	1814	12	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_8	118.883511288144	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAATAAACCCCGTGAACC	219494691	True	NA	-12	True	NA	NA	NA	219498864	219506964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219498939_219499955_219500016_219500120_219500219_219501475_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505694_219505762_219505979_219506073_219506253_219506423_219506697
transcript_123094.known	chr2	+	1799	12	FSM	ENSG00000144591.20	ENST00000684274.1	1799	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	125.630969493464	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAATAAACCCCGTGAACC	219494691	True	NA	-12	True	NA	NA	NA	219498864	219506964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219498939_219499955_219500016_219500120_219500219_219501475_219502038_219502381_219502442_219504082_219504219_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
transcript_123102.nnic	chr2	+	3050	11	NIC	ENSG00000072195.15	novel	3379	11	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	31.5379136913018	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGGTGTGTTGTGTTTT	219440267	True	NA	10	True	AATAAA	-15	NA	219442043	219466860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_219442084_219443107_219443151_219444029_219444060_219444652_219444743_219444824_219444985_219447973_219449272_219451135_219451280_219461881_219462058_219462297_219462387_219464432_219464609_219466056
transcript_123105.known	chr2	+	3379	11	FSM	ENSG00000072195.15	ENST00000396698.5	3379	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	29.1540734718152	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGGTGTGTTGTGTTTT	219440268	True	NA	10	True	AATAAA	-15	NA	219442044	219466860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219442084_219443107_219443151_219444652_219444743_219444824_219445162_219447973_219449272_219451135_219451280_219451624_219451808_219461881_219462058_219462297_219462387_219464432_219464609_219466056
transcript_123106.nic	chr2	+	4163	11	NIC	ENSG00000072195.15	novel	3379	11	NA	NA	-23	0	intron_retention	FALSE	canonical	0	0	junction_4	24.8131013781027	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGGTGTGTTGTGTTTT	219440216	True	NA	10	True	AATAAA	-15	NA	219441992	219466860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_219442084_219443107_219444060_219444652_219444743_219444824_219444985_219447973_219449272_219451135_219451280_219451624_219451808_219461881_219462058_219462297_219462387_219464432_219464609_219466056
transcript_123129.known	chr2	+	2213	5	FSM	ENSG00000188760.11	ENST00000373883.4	2213	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	7.46240577829965	267	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTCTTTGGTGGCTGG	219543572	True	NA	36	True	TATAAA	-31	NA	219544027	219550595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219544378_219544688_219544894_219547505_219548082_219549151_219549355_219549716
transcript_123132.known	chr2	-	3028	4	FSM	ENSG00000123989.15	ENST00000243776.11	3028	4	0	0	0	0	multi-exon	FALSE	canonical	3	655	junction_2	27.8607649252891	1875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGATTCAGAGGTTTTG	-219543501	False	NA	-10	True	AATAAA	-16	NA	219543809	219538953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219540643_219540945_219541126_219541615_219542190_219543224
transcript_123140.known	chr2	-	2634	4	FSM	ENSG00000123989.15	ENST00000535926.3	2210	4	0	-424	0	6	multi-exon	FALSE	canonical	1	6	junction_3	320.223186057613	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAGAGGTTTTGAAAAGG	-219542789	False	NA	-4	True	AATAAA	-22	NA	219543097	219538947	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219540643_219540945_219541126_219541615_219542190_219542912
transcript_123148.known	chr2	-	1079	2	FSM	ENSG00000123989.15	ENST00000373891.3	1044	2	-35	0	22	0	multi-exon	FALSE	canonical	3	716	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTATCTTCCTTTGTG	-219543265	False	3541	-10	True	AGTAAA	-18	NA	219543573	219541459	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219542190_219543224
transcript_123149.known	chr2	-	5520	14	FSM	ENSG00000124006.15	ENST00000603926.5	5520	14	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	215.386538452953	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTCCCAATGTTATTC	-219571261	False	NA	-17	True	AATAAA	-1	NA	219571289	219555165	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219556293_219556453_219556724_219557342_219557619_219557822_219558111_219558183_219558460_219559224_219559498_219562401_219562675_219563354_219563628_219565241_219565515_219566829_219567127_219567272_219567576_219567717_219567970_219568054_219568325_219570220
transcript_123177.nnic	chr2	-	3052	10	NNC	ENSG00000124006.15	novel	3297	9	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	169.51047893607	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGACACCTGGTGATAAG	-219568737	True	NA	-17	True	AATAAA	-17	NA	219571562	219561721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_219562009_219562401_219562675_219563354_219563628_219565241_219565515_219566829_219567127_219567272_219567576_219567717_219567970_219568054_219568325_219570220_219570897_219571414
transcript_123178.nnic	chr2	-	3239	10	NNC	ENSG00000124006.15	novel	3297	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	169.51047893607	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGACACCTGGTGATAAG	-219568714	True	NA	-17	True	AATAAA	-17	NA	219571539	219561721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_219562009_219562401_219562675_219563354_219563628_219565241_219565515_219566829_219567127_219567272_219567576_219567717_219567970_219568054_219568325_219570220_219571149_219571456
transcript_123184.known	chr2	-	3297	9	FSM	ENSG00000124006.15	ENST00000373873.8	3297	9	0	0	0	0	multi-exon	FALSE	canonical	3	446	junction_8	60.4297112354511	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGACACCTGGTGATAAG	-219571261	False	NA	-17	True	AATAAA	-17	NA	219571289	219561721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219562009_219562401_219562675_219563354_219563628_219565241_219565515_219566829_219567127_219567272_219567576_219567717_219567970_219568054_219568325_219570220
transcript_123185.known	chr2	-	2274	9	FSM	ENSG00000124006.15	ENST00000289656.3	2274	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	178.523632889318	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACCAATAAACATGCAAATAA	-219568639	True	NA	-42	True	NA	NA	NA	219571464	219561746	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219562009_219562401_219562675_219563354_219563628_219565241_219565515_219566829_219567127_219567272_219567576_219567717_219567970_219568054_219568325_219571393
transcript_123206.nic	chr2	-	672	4	ISM	ENSG00000124006.15	ENST00000373876.5	5503	20	18523	-27	-4	0	3prime_fragment	FALSE	canonical	3	61	junction_3	35.4432253360529	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTGCCTCTCTGAGT	-219552654	False	NA	-5	True	AATAAA	-14	NA	219552718	219550728	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_219550843_219551528_219551799_219552111_219552217_219552535
transcript_123207.known	chr2	-	694	4	FSM	ENSG00000124006.15	ENST00000489804.5	694	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	53.8227543785051	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTGCCTCTCTGAGT	-219552650	False	NA	-5	True	AATAAA	-14	NA	219552714	219550728	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219550869_219551528_219551799_219552111_219552217_219552535
transcript_123208.known	chr2	-	662	3	FSM	ENSG00000124006.15	ENST00000462534.5	662	3	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	11.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTGCCTCTCTGAGT	-219551039	True	NA	-5	True	AATAAA	-14	NA	219552389	219550728	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_219550843_219551528_219551799_219552111
transcript_123219.known	chr2	+	3618	25	FSM	ENSG00000144589.22	ENST00000456909.6	3618	25	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	12.6160584397646	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCATGTGTGGTACTTAGA	219596454	True	NA	15	True	AATAAA	-18	NA	219597856	219616451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219597924_219598093_219598181_219601234_219601441_219601640_219601716_219601987_219602084_219602467_219602576_219602704_219602777_219605607_219605735_219605955_219606060_219606194_219606291_219606475_219606518_219606711_219606859_219607052_219607138_219608046_219608431_219608582_219608789_219609096_219609214_219609362_219609541_219611603_219611835_219611954_219612059_219613127_219613226_219613751_219613931_219614160_219614243_219614475_219614547_219615093_219615342_219616043
transcript_12322.nic	chr1	-	4318	8	NIC	ENSG00000134207.17	novel	4424	8	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	341	junction_2	61.5739144344057	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTTGTCATTTTATGT	-114151431	False	NA	-2	True	ATTAAA	-18	NA	114152954	114089291	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_114092083_114093734_114093804_114097726_114097878_114099093_114099266_114103600_114103722_114137494_114138054_114139614_114139881_114152765
transcript_123221.nnic	chr2	+	3556	25	NNC	ENSG00000144589.22	novel	3618	25	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_23	18.0190871022924	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCATGTGTGGTACTTAGA	219596459	True	NA	15	True	AATAAA	-18	NA	219597861	219616451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_219597924_219598093_219598181_219601234_219601441_219601640_219601716_219601987_219602084_219602467_219602576_219602704_219602777_219605607_219605735_219605955_219606060_219606194_219606291_219606475_219606518_219606711_219606859_219607052_219607138_219608046_219608431_219608582_219608789_219609096_219609214_219609362_219609541_219611603_219611835_219611954_219612059_219613127_219613226_219613751_219613931_219614160_219614243_219614475_219614547_219615150_219615342_219616043
transcript_12323.known	chr1	-	1897	8	FSM	ENSG00000134207.17	ENST00000610096.1	1897	8	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_7	134.614187929195	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGGGAAAAAAAAAAAG	-114152327	True	NA	16	True	NA	NA	NA	114153850	114091764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_114092083_114093734_114093804_114097726_114097878_114099093_114099266_114103600_114103722_114137494_114138054_114139614_114139881_114153609
transcript_12326.nic	chr1	-	3173	8	NIC	ENSG00000134207.17	novel	4424	8	NA	NA	-45	266	combination_of_known_junctions	FALSE	canonical	3	341	junction_2	61.5739144344057	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTGTCAGATTTCTCT	-114151502	False	NA	-2	True	AATAAA	-18	NA	114153025	114090507	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_114092083_114093734_114093804_114097726_114097878_114099093_114099266_114103600_114103722_114137494_114138054_114139614_114139881_114152765
transcript_123265.known	chr2	+	4151	23	FSM	ENSG00000114923.17	ENST00000358055.8	4151	23	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_1	10.4806985130913	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTCACTTTCTTGGTT	219627283	True	NA	17	True	NA	NA	NA	219627629	219641971	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219627746_219627899_219628044_219628404_219628571_219629143_219629422_219629579_219629696_219630152_219630353_219631967_219632117_219632261_219632443_219632873_219633010_219633273_219633458_219633879_219633980_219634419_219634605_219635270_219635497_219635672_219635892_219636301_219636451_219636679_219636875_219637580_219637812_219638163_219638254_219638702_219638870_219639481_219639736_219640429_219640600_219640788_219640963_219641650
transcript_123268.known	chr2	+	4069	23	FSM	ENSG00000114923.17	ENST00000317151.7	4069	23	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	11.1629552649795	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTTGGTTTCATCTTTG	219627314	True	NA	26	True	NA	NA	NA	219627660	219641980	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_219627746_219627959_219628044_219628404_219628571_219629143_219629422_219629579_219629696_219630152_219630353_219631967_219632117_219632261_219632443_219632873_219633010_219633273_219633458_219633879_219633980_219634419_219634605_219635270_219635497_219635672_219635892_219636301_219636451_219636679_219636875_219637580_219637812_219638163_219638254_219638702_219638870_219639481_219639736_219640429_219640600_219640788_219640963_219641650
transcript_123279.known	chr2	-	6362	18	FSM	ENSG00000116106.12	ENST00000281821.7	6362	18	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_12	3.07236820169426	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTTGTCTCTTTCAATA	-221572110	True	NA	NA	False	AATAAA	-26	NA	221572304	221418026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_221420553_221425208_221426143_221426463_221426620_221429957_221430152_221434141_221434292_221436398_221436609_221437060_221437123_221442828_221443015_221443492_221443607_221446122_221446182_221455546_221455659_221456612_221456773_221457865_221457991_221482351_221482691_221501016_221501173_221563730_221564395_221568717_221568786_221572157
transcript_123281.nic	chr2	-	3191	17	ISM	ENSG00000116106.12	ENST00000409938.5	3363	18	1851	0	7	0	3prime_fragment	FALSE	canonical	2	2	junction_11	2.91279504943276	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGCAGCGTTGCTTGGT	-221572157	True	NA	NA	False	ATTAAA	-21	NA	221572351	221425900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_221426143_221426463_221426620_221429957_221430152_221434141_221434292_221436398_221436609_221437060_221437123_221442828_221443015_221443492_221443607_221446122_221446182_221455546_221455659_221456612_221456773_221457865_221457991_221482351_221482691_221501016_221501173_221563730_221564395_221568717_221568786_221572157
transcript_123282.known	chr2	+	1949	1	FSM	ENSG00000272944.1	ENST00000609776.1	1949	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGGGTTCTTTCATGT	221572472	True	NA	NA	False	CATAAA	-40	NA	221572505	221574454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_221572500_221574500
transcript_123293.known	chr2	-	6761	17	FSM	ENSG00000116120.11	ENST00000281828.8	6761	17	0	0	0	0	multi-exon	FALSE	canonical	3	702	junction_7	82.6509745480959	419	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCTATAGTCTTTTGT	-222647495	True	NA	1	True	AATAAA	-19	NA	222656092	222566898	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_222572023_222599927_222600084_222613810_222613929_222619644_222619738_222623649_222623731_222624271_222624480_222624713_222624776_222628836_222628889_222630112_222630175_222631603_222631675_222633198_222633308_222634390_222634542_222639579_222639696_222640861_222640932_222642850_222643006_222648739_222648796_222656015
transcript_123300.known	chr2	+	5500	17	FSM	ENSG00000123983.15	ENST00000680147.1	5500	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	176.072738875159	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATAAAAGTTGAAGTTTC	222847722	True	NA	NA	False	AATAAA	-3	NA	222861013	222944609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_222861259_222887829_222887889_222892263_222892302_222908732_222909151_222916318_222916497_222918045_222918156_222919063_222919203_222921279_222921431_222922707_222922832_222923077_222923150_222924455_222924596_222927016_222927190_222928861_222928937_222930620_222930813_222933165_222933281_222934529_222934688_222941496
transcript_123303.known	chr2	+	5577	17	FSM	ENSG00000123983.15	ENST00000357430.8	5577	17	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_2	138.584586083734	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTTAATATATTGGCTTT	222847744	True	NA	NA	False	AATAAA	-33	NA	222861035	222944639	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_222861259_222887829_222887889_222900673_222900781_222908732_222909151_222916318_222916497_222918045_222918156_222919063_222919203_222921279_222921431_222922707_222922832_222923077_222923150_222924455_222924596_222927016_222927190_222928861_222928937_222930620_222930813_222933165_222933281_222934529_222934688_222941496
transcript_12331.nic	chr1	-	2620	8	NIC	ENSG00000134207.17	novel	4424	8	NA	NA	-45	-287	combination_of_known_junctions	FALSE	canonical	3	341	junction_2	61.5739144344057	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAGTTTGAGTCCATCTT	-114151502	False	NA	3	True	ATTAAA	-36	NA	114153025	114091060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_114092083_114093734_114093804_114097726_114097878_114099093_114099266_114103600_114103722_114137494_114138054_114139614_114139881_114152765
transcript_123315.known	chr2	+	3147	16	FSM	ENSG00000123983.15	ENST00000392066.7	3147	16	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_2	56.3056736829326	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGAGATCTTGTGAATATA	NA	False	NA	13	True	AATAAA	-26	NA	222860941	222942222	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_222861259_222887829_222887889_222908732_222909151_222916318_222916497_222918045_222918156_222919063_222919203_222921279_222921431_222922707_222922832_222923077_222923150_222924455_222924596_222927016_222927190_222928861_222928937_222930620_222930813_222933165_222933281_222934529_222934688_222941496
transcript_123318.known	chr2	+	5545	16	FSM	ENSG00000123983.15	ENST00000680525.1	5545	16	0	0	0	0	multi-exon	FALSE	canonical	2	31	junction_11	130.753100664318	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATAAAAGTTGAAGTTTC	222847692	True	NA	NA	False	AATAAA	-3	NA	222860983	222944609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_222861259_222887829_222887889_222908732_222909151_222916318_222916497_222918045_222918156_222919063_222919203_222921279_222921431_222922707_222922832_222923077_222923150_222924455_222924596_222927016_222927243_222928861_222928937_222930620_222930813_222933165_222933281_222934529_222934688_222941496
transcript_123321.known	chr2	+	5468	16	FSM	ENSG00000123983.15	ENST00000679545.1	5468	16	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	137.699899136572	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATAAAAGTTGAAGTTTC	222847692	True	NA	NA	False	AATAAA	-3	NA	222860983	222944609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_222861259_222887829_222887889_222908732_222909151_222916318_222916497_222918069_222918156_222919063_222919203_222921279_222921431_222922707_222922832_222923077_222923150_222924455_222924596_222927016_222927190_222928861_222928937_222930620_222930813_222933165_222933281_222934529_222934688_222941496
transcript_123324.known	chr2	+	5539	16	FSM	ENSG00000123983.15	ENST00000680395.1	5539	16	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	160.887621235031	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATAAAAGTTGAAGTTTC	222847693	True	NA	NA	False	AATAAA	-3	NA	222860984	222944609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_222861259_222900673_222900781_222908732_222909151_222916318_222916497_222918045_222918156_222919063_222919203_222921279_222921431_222922707_222922832_222923077_222923150_222924455_222924596_222927016_222927190_222928861_222928937_222930620_222930813_222933165_222933281_222934529_222934688_222941496
transcript_123330.known	chr2	+	5433	15	FSM	ENSG00000123983.15	ENST00000680251.1	5433	15	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	132.002029205182	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATAAAAGTTGAAGTTTC	222847692	True	NA	NA	False	AATAAA	-3	NA	222860983	222944609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_222861259_222908732_222909151_222916318_222916497_222918045_222918156_222919063_222919203_222921279_222921431_222922707_222922832_222923077_222923150_222924455_222924596_222927016_222927190_222928861_222928937_222930620_222930813_222933165_222933281_222934529_222934688_222941496
transcript_123338.known	chr2	+	1900	10	FSM	ENSG00000123983.15	ENST00000680382.1	1900	10	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_2	49.6210329757478	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCTAACACAGTGAAACCC	222847692	True	NA	NA	False	NA	NA	NA	222860983	222924829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_222861259_222887829_222887889_222908732_222909151_222916318_222916497_222918045_222918156_222919063_222919203_222921279_222921431_222922707_222922832_222923077_222923150_222924455
transcript_12335.known	chr1	-	4352	8	FSM	ENSG00000134207.17	ENST00000607941.5	4352	8	0	0	0	0	multi-exon	TRUE	canonical	1	8	junction_7	162.355618747167	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTTGTCATTTTATGT	-114150917	False	5947	-2	True	ATTAAA	-18	NA	114152440	114089291	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_114092083_114093734_114093804_114097726_114097878_114099093_114099266_114103600_114103722_114137494_114138054_114139614_114139881_114152217
transcript_123352.known	chr2	-	3986	5	FSM	ENSG00000152056.17	ENST00000396654.7	3986	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	3.74165738677394	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGTGTTTTCATGAAT	-223836441	True	NA	2	True	AATAAA	-27	NA	223837582	223755325	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_223758751_223765212_223765351_223775900_223776010_223777690_223777870_223837447
transcript_123356.known	chr2	-	4607	12	FSM	ENSG00000085449.15	ENST00000233055.9	4607	12	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_3	54.965052758943	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTTTGCCTAATATCAC	-223937785	True	NA	-15	True	AATAAA	-18	NA	223945335	223875347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_223878731_223880123_223880233_223881941_223882073_223884647_223884750_223894233_223894340_223895503_223895631_223898957_223899071_223901182_223901334_223905946_223906002_223912252_223912327_223917942_223918011_223945147
transcript_12336.nic	chr1	-	1916	8	NIC	ENSG00000134207.17	novel	1897	8	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	3	341	junction_2	61.5739144344057	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGGGAAAAAAAAAAAG	-114151502	False	NA	16	True	NA	NA	NA	114153025	114091764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_114092083_114093734_114093804_114097726_114097878_114099093_114099266_114103600_114103722_114137494_114138054_114139614_114139881_114152765
transcript_123378.known	chr2	-	864	5	FSM	ENSG00000085449.15	ENST00000483061.1	864	5	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_2	49.2392120164407	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATGCAAACCCTTCCTC	-223937785	True	NA	NA	False	NA	NA	NA	223945335	223900854	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_223901334_223905946_223906002_223912252_223912327_223917942_223918011_223945147
transcript_123383.known	chr2	+	1689	4	FSM	ENSG00000135900.4	ENST00000258383.4	1689	4	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_3	19.3964487013015	240	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGCATTTTAATTTGATA	223950110	True	NA	23	True	AATAAA	-23	NA	223957462	223967714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_223957652_223959533_223960003_223963755_223963935_223966862
transcript_123389.known	chr2	-	2226	9	FSM	ENSG00000135919.14	ENST00000409304.6	2226	9	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_3	40.2235938225316	244	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCGGAGACTTTTCCTATT	-224034465	True	NA	60	True	AATAAA	-34	NA	224039286	223975044	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_223975905_223977543_223977628_223980310_223980398_223982680_223982782_223984751_223984951_223991802_223992001_223998114_223998343_224001641_224001923_224039098
transcript_12339.nic	chr1	-	1794	8	NIC	ENSG00000134207.17	novel	1897	8	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_2	143.091807264156	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGGGAAAAAAAAAAAG	-114146977	True	NA	16	True	NA	NA	NA	114152924	114091764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_114092083_114093734_114093804_114097747_114097878_114099093_114099266_114103600_114103722_114137494_114138054_114139614_114139881_114152765
transcript_123397.known	chr2	-	6756	16	FSM	ENSG00000036257.14	ENST00000264414.9	6756	16	0	0	0	0	multi-exon	TRUE	canonical	3	509	junction_15	74.6721426563407	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTCTGCAGTTGTGATT	-224582727	True	NA	NA	False	ATTAAA	-17	NA	224585363	224470149	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_224474377_224478199_224478346_224481891_224482079_224495831_224495967_224497752_224497850_224500362_224500488_224502964_224503073_224503651_224503823_224505955_224506133_224506857_224507004_224511353_224511583_224513523_224513639_224514611_224514773_224535527_224535642_224557658_224557857_224584943
transcript_123402.known	chr2	-	9771	2	FSM	ENSG00000169047.6	ENST00000305123.6	9771	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGTAAGAGCAGTGTATG	-226797762	True	NA	-7	True	ATTAAA	-19	NA	226799820	226731311	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_226736251_226794988
transcript_123405.known	chr2	-	506	2	FSM	ENSG00000169047.6	ENST00000498335.1	506	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAACAGAAAAAGACTCT	-226795233	False	NA	NA	False	AAAAAG	-9	NA	226795246	226792137	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_226792386_226794988
transcript_123406.known	chr2	+	5061	9	FSM	ENSG00000144468.17	ENST00000392062.7	5061	9	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	42.4291689171494	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGCTCATTTATACTGT	226834129	True	NA	NA	False	AATAAA	-23	NA	226836053	226999210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_226836088_226838072_226838155_226839408_226839628_226864603_226865127_226867185_226867319_226906792_226906882_226908821_226908879_226914207_226914352_226995430
transcript_123417.known	chr2	+	4883	7	FSM	ENSG00000144468.17	ENST00000341329.7	4883	7	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	21.3983384609387	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCATTTATACTGTCACCA	226835925	False	NA	NA	False	AATAAA	-28	NA	226835935	226999215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_226836088_226864603_226865127_226867185_226867319_226906792_226906882_226908821_226908879_226914207_226914352_226995430
transcript_123428.known	chr2	+	2186	11	FSM	ENSG00000168958.20	ENST00000353339.7	2186	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_7	238.775543136227	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGTCTGTTGAAGGAT	227315488	True	NA	23	True	AATAAA	-16	NA	227325238	227357833	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_227325428_227328677_227328790_227329605_227329784_227330625_227330847_227332418_227332589_227340291_227340381_227342744_227342820_227347225_227347385_227352513_227352574_227355676_227355762_227356985
transcript_123435.known	chr2	+	1921	9	FSM	ENSG00000168958.20	ENST00000304593.14	1921	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	221.343871329206	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGTCTGTTGAAGGAT	227315500	True	NA	23	True	AATAAA	-16	NA	227325250	227357833	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_227325428_227328677_227328790_227330625_227330847_227332418_227332589_227340291_227340381_227347225_227347385_227352513_227352574_227355676_227355762_227356985
transcript_123440.known	chr2	+	1760	8	FSM	ENSG00000168958.20	ENST00000337110.11	1760	8	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_6	212.447448483965	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGTCTGTTGAAGGAT	227315517	True	NA	23	True	AATAAA	-16	NA	227325267	227357833	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_227325428_227328677_227328790_227330625_227330847_227332418_227332589_227340291_227340381_227342744_227342820_227355676_227355762_227356985
transcript_123443.known	chr2	+	1716	8	FSM	ENSG00000168958.20	ENST00000349901.11	1716	8	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_5	191.437952861804	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAACTGTCAACCAAAGA	227315525	True	NA	2	True	TTTAAA	-35	NA	227325275	227357812	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_227325428_227328677_227328790_227330625_227330847_227332418_227332589_227340291_227340381_227352513_227352574_227355676_227355762_227356985
transcript_123446.known	chr2	+	1085	7	FSM	ENSG00000168958.20	ENST00000354503.10	1085	7	0	0	0	0	multi-exon	FALSE	canonical	3	408	junction_5	70.6588045940962	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCACACCCTGAAAATGT	227315499	True	NA	49	True	NA	NA	NA	227325249	227357215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_227325428_227328677_227328790_227330625_227330847_227332418_227332589_227340291_227340381_227355676_227355762_227356985
transcript_123452.known	chr2	+	1548	6	FSM	ENSG00000168958.20	ENST00000409565.5	1548	6	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	190.423317899883	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTAGTGTATTTAATAAAC	227315508	True	NA	-11	True	TTTAAA	-22	NA	227325258	227357799	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_227325428_227330625_227330847_227332418_227332589_227340291_227340381_227355676_227355762_227356985
transcript_123454.known	chr2	+	647	5	FSM	ENSG00000168958.20	ENST00000524634.5	647	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	221.509029161341	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAAAAATACTGTCTCAAC	227315520	True	NA	-35	True	NA	NA	NA	227325270	227357131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_227325428_227332418_227332589_227340291_227340381_227355676_227355762_227356985
transcript_123459.known	chr2	+	8677	13	FSM	ENSG00000173744.18	ENST00000310078.13	8677	13	0	0	0	0	multi-exon	FALSE	canonical	3	478	junction_11	32.7222104319918	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGAATAGCCTCTTTCA	227459781	True	NA	9	True	AATAAA	-22	NA	227472155	227561217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_227472589_227491546_227491641_227519947_227520064_227523762_227523926_227524761_227524916_227531090_227531211_227533548_227533759_227534844_227535026_227536624_227536705_227536900_227536994_227551958_227552118_227553703_227553796_227554435
transcript_123466.known	chr2	-	2593	7	FSM	ENSG00000135917.16	ENST00000431622.6	2593	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	6.41396046829795	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCCAGAGGTTCAAGACCA	-227717734	True	NA	NA	False	NA	NA	NA	227718001	227686551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_227687574_227688165_227688308_227695888_227696082_227698735_227699565_227700912_227701109_227702168_227702321_227717942
transcript_123469.known	chr2	-	5213	6	FSM	ENSG00000135917.16	ENST00000644224.2	5213	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	3.65513337649941	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGCCTACTGTGGAGTA	-227717761	True	NA	NA	False	AATAAA	-24	NA	227718028	227683762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_227687574_227688165_227688308_227695888_227696082_227698735_227699565_227702168_227702321_227717942
transcript_123473.known	chr2	+	1683	13	FSM	ENSG00000123977.10	ENST00000309931.3	1683	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	3.10465600169953	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTGTACATGTGTATTT	227871577	True	NA	7	True	AATAAA	-15	NA	227871630	227924344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_227871730_227885350_227885424_227889855_227890001_227891254_227891314_227893794_227893918_227898181_227898282_227903001_227903110_227904928_227905036_227906235_227906339_227907137_227907253_227918779_227918857_227921398_227921562_227923933
transcript_123474.known	chr2	-	2557	3	FSM	ENSG00000153823.19	ENST00000392055.8	2557	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	1.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGTCTGTCCTTTTTC	-229271202	True	NA	1	True	AATAAA	-37	NA	229271287	229023972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_229026109_229155817_229155965_229271013
transcript_123475.known	chr2	-	3257	13	FSM	ENSG00000187957.8	ENST00000341772.5	3257	13	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	2.96741563579414	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGTTGTCTCTTTTGTTC	-229714369	True	NA	-2	True	AATAAA	-18	NA	229714555	229357628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_229358652_229366872_229367120_229388264_229388397_229407231_229407346_229418107_229418231_229447315_229447541_229477139_229477254_229512782_229512937_229546946_229547093_229585857_229586025_229588393_229588489_229591579_229591889_229714147
transcript_123484.known	chr2	+	3120	5	FSM	ENSG00000153832.12	ENST00000373652.7	3120	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	64.9167736413325	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGCCATAATAATCTGAGT	NA	False	NA	NA	False	ATTAAA	-16	NA	229922301	230013109	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_229922610_229932770_229932887_229976240_229976350_229996750_229996924_230010695
transcript_123485.known	chr2	+	2813	4	FSM	ENSG00000153832.12	ENST00000283946.8	2813	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	63.2894584868251	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTGAGTGCCTTATTAC	229921287	True	NA	NA	False	ATTAAA	-26	NA	229922502	230013119	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_229922610_229976240_229976350_229996750_229996924_230010695
transcript_123488.known	chr2	-	4315	5	FSM	ENSG00000163053.11	ENST00000295190.9	4315	5	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_3	1.87082869338697	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGTCAGTGAGTTTTTGT	-230068830	True	NA	-7	True	AATAAA	-17	NA	230068924	230034981	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_230037532_230045744_230046723_230049760_230049905_230059093_230059367_230068554
transcript_123491.known	chr2	-	1836	4	FSM	ENSG00000163053.11	ENST00000457406.5	1836	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	2.16024689946929	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTACATTTTCCTTTT	-230068891	False	NA	NA	False	TATAAA	-27	NA	230068907	230045656	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_230046723_230049760_230049905_230059093_230059367_230068554
transcript_123502.known	chr2	+	1898	15	FSM	ENSG00000067066.17	ENST00000409341.5	1898	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.03263087820007	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACTCTCAAACGTTAGT	230416226	False	NA	NA	False	AATAAA	-12	NA	230416246	230470517	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_230416329_230417590_230417666_230442936_230443100_230444177_230444347_230446818_230446903_230449087_230449151_230449560_230449711_230450171_230450256_230461261_230461415_230462434_230462519_230464066_230464151_230466300_230466355_230467119_230467216_230469042_230469097_230470014
transcript_123504.known	chr2	+	3829	9	FSM	ENSG00000135932.12	ENST00000258418.10	3829	9	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_2	25.5966306376445	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGTCTTTATGATGTG	230709816	True	NA	17	True	AATAAA	-18	NA	230712841	230821075	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_230713231_230759958_230760116_230790871_230791037_230793212_230793332_230798728_230798898_230810262_230810323_230814048_230814115_230817753_230817898_230818515
transcript_123516.nic	chr2	+	2069	6	NIC	ENSG00000135916.16	novel	572	4	NA	NA	-90	0	combination_of_known_junctions	TRUE	canonical	3	14	junction_1	1713.02056029693	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGACTTGAGTGTGGCTG	230864513	True	NA	15	True	AATAAA	-17	NA	230864548	230879248	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_230864785_230873416_230873558_230875619_230875809_230876856_230876968_230877399_230877551_230878007
transcript_123517.nic	chr2	+	2008	6	NIC	ENSG00000135916.16	novel	563	4	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	3	151	junction_1	1658.54507324944	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGACTTGAGTGTGGCTG	230865556	False	NA	15	True	AATAAA	-17	NA	230865610	230879248	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_230865786_230873416_230873558_230875619_230875809_230876856_230876968_230877399_230877551_230878007
transcript_123520.known	chr2	+	1889	5	FSM	ENSG00000135916.16	ENST00000335005.10	1889	5	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_1	1688.69244905637	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGACTTGAGTGTGGCT	230802816	True	NA	14	True	AATAAA	-16	NA	230864947	230879247	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_230865146_230875619_230875809_230876856_230876968_230877399_230877551_230878007
transcript_123522.known	chr2	+	2037	6	FSM	ENSG00000135916.16	ENST00000326427.11	2037	6	0	0	0	0	multi-exon	FALSE	canonical	3	4003	junction_2	225.072965946601	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGACTTGAGTGTGGCTG	230802810	True	NA	15	True	AATAAA	-17	NA	230864941	230879248	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_230865146_230873416_230873558_230875619_230875809_230876856_230876968_230877399_230877551_230878007
transcript_123523.known	chr2	+	1888	5	FSM	ENSG00000135916.16	ENST00000326407.10	1888	5	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_3	1821.39074610584	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGACTTGAGTGTGGCTG	230802848	True	NA	15	True	AATAAA	-17	NA	230864979	230879248	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_230865146_230873416_230873558_230875619_230875809_230877399_230877551_230878007
transcript_123524.known	chr2	-	3508	6	FSM	ENSG00000238062.6	ENST00000414876.5	3508	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.6	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTCTGTGTGGAGCTCC	NA	False	NA	NA	False	AAAAAG	-38	NA	230996031	230984367	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_230986111_230986983_230988180_230991768_230991976_230992333_230992403_230995276_230995386_230995847
transcript_123525.known	chr2	+	3411	26	FSM	ENSG00000173692.14	ENST00000677000.1	3411	26	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_19	378.139517109757	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCCCACACCATGAAATGC	231040955	True	NA	-2	True	AATAAA	-12	NA	231056848	231172802	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231152716_231152812_231153563_231153667_231161339_231161510_231163634_231163728_231165199_231165287_231165870_231166018_231170565_231170722_231172534
transcript_123528.known	chr2	+	3323	25	FSM	ENSG00000173692.14	ENST00000308696.11	3323	25	0	0	0	0	multi-exon	FALSE	canonical	3	1187	junction_6	83.0740027358472	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAAGAGCCAGAGTCTTG	231040973	True	NA	23	True	AATAAA	-37	NA	231056866	231172827	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231153563_231153667_231161339_231161510_231163634_231163728_231165199_231165287_231165870_231166018_231170565_231170722_231172534
transcript_123532.known	chr2	+	4089	23	FSM	ENSG00000173692.14	ENST00000676506.1	4089	23	0	0	0	0	multi-exon	FALSE	canonical	3	1187	junction_6	75.8061495793685	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTTTTACAGAGAACGTAT	231040970	True	NA	NA	False	NA	NA	NA	231056863	231167229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231153563_231153667_231161339_231161510_231163634_231163728_231165199_231165287_231165870
transcript_123533.known	chr2	+	3080	23	FSM	ENSG00000173692.14	ENST00000409643.6	3080	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	296.034242491089	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGATGGACAAGACATTTG	231040955	True	NA	7	True	AATAAA	-11	NA	231056848	231172746	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231153563_231153667_231161339_231161510_231165870_231166018_231170565_231170722_231172534
transcript_123543.nic	chr2	+	2899	22	ISM	ENSG00000173692.14	ENST00000676506.1	4089	23	-168	1942	-149	0	5prime_fragment	FALSE	canonical	3	1187	junction_6	73.1256800266847	1182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTATAAATTGGTGGTCA	NA	False	NA	NA	False	AAAAAG	-37	NA	231056695	231165287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231153563_231153667_231161339_231161510_231163634_231163728_231165199
transcript_123547.nic	chr2	+	2626	21	ISM	ENSG00000173692.14	ENST00000676506.1	4089	23	0	3519	0	0	5prime_fragment	FALSE	canonical	3	1187	junction_6	74.1973550741534	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAAGGAAAAGGTA	231040970	True	NA	18	True	NA	NA	NA	231056863	231163710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231153563_231153667_231161339_231161510_231163634
transcript_123566.nic	chr2	+	543	5	ISM	ENSG00000173692.14	ENST00000678837.1	1572	11	6	12797	6	-3133	5prime_fragment	FALSE	canonical	3	1355	junction_2	36.2629287289375	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATTGACCAGAGATTGGA	231040961	True	NA	NA	False	NA	NA	NA	231056854	231066973	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905
transcript_123568.known	chr2	+	3370	26	FSM	ENSG00000173692.14	ENST00000676818.1	3370	26	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_23	375.407477815773	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCTCCAGATGGACAAGAC	231040951	True	NA	2	True	AATAAA	-6	NA	231056844	231172741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231153563_231153667_231161339_231161510_231163634_231163728_231165199_231165287_231165870_231166018_231166380_231166492_231170565_231170722_231172534
transcript_123570.known	chr2	+	7879	25	FSM	ENSG00000135931.19	ENST00000611582.5	7879	25	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_24	87.4162992524849	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTTGTACTCTGTCCC	231194798	True	NA	7	True	NA	NA	NA	231198630	231376848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231198699_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974_231345091_231355797_231355935_231360753_231360884_231369952_231370126_231371512
transcript_123584.known	chr2	+	2148	21	FSM	ENSG00000135931.19	ENST00000682030.1	2148	21	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	52.495976036264	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATTCATTTTGAAAAGC	231194841	True	NA	-4	True	TTTAAA	-11	NA	231198673	231345181	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231198699_231206197_231206290_231208126_231208253_231214833_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974
transcript_123586.known	chr2	+	2397	21	FSM	ENSG00000135931.19	ENST00000684718.1	2397	21	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	55.542123654034	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATTCATTTTGAAAAGCA	231194843	True	NA	-3	True	TTTAAA	-12	NA	231198675	231345182	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231198946_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974
transcript_123588.known	chr2	+	2091	20	FSM	ENSG00000135931.19	ENST00000683271.1	2091	20	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_8	50.3449596131406	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATTCATTTTGAAAAGC	231194802	True	NA	-4	True	TTTAAA	-11	NA	231198634	231345181	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231198699_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974
transcript_123589.nic	chr2	+	2360	20	NIC	ENSG00000135931.19	novel	2397	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	70.2501663526584	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTATCTCTTTATTTTT	231194798	True	NA	14	True	AATAAA	-17	NA	231198630	231345199	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_231198946_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974
transcript_123598.known	chr2	+	1941	12	FSM	ENSG00000135931.19	ENST00000682027.1	1941	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_11	72.4557431177391	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAAACCCTGAAGATT	231194798	True	NA	NA	False	NA	NA	NA	231198630	231260004	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231198699_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231259198
transcript_123603.known	chr2	+	2093	20	FSM	ENSG00000135931.19	ENST00000682002.1	2093	20	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	69.4696171058329	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATTCATTTTGAAAAGC	231194798	True	NA	-4	True	TTTAAA	-11	NA	231198630	231345181	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231198699_231206199_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974
transcript_123604.known	chr2	+	2261	16	FSM	ENSG00000135931.19	ENST00000683814.1	2261	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	66.4551979406678	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTTAAGTCTCATTCTG	231194839	True	NA	4	True	AATAGA	-3	NA	231198671	231278857	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231198942_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381
transcript_123606.known	chr2	+	3539	2	FSM	ENSG00000156966.7	ENST00000287590.6	3539	2	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	0	258	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGTGTCTGAGGAGTTTT	231370699	True	NA	17	True	AATAAA	-19	NA	231395709	231401164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231395815_231397730
transcript_123607.known	chr2	-	2205	15	FSM	ENSG00000115053.17	ENST00000356936.6	2205	15	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_6	1724.37965923507	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTCCCTCTGCTTTCC	-231464337	False	NA	NA	False	NA	NA	NA	231464353	231455190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_231455268_231455400_231455625_231456009_231456137_231456630_231456765_231457000_231457125_231457285_231457358_231457642_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231464335
transcript_12364.nic	chr1	-	1279	5	NIC	ENSG00000134207.17	novel	4424	8	NA	NA	-45	-7428	combination_of_known_junctions	FALSE	canonical	3	411	junction_4	44.7241545476267	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCTCAATCCTGTCTACA	-114151502	False	NA	NA	False	CATAAA	-7	NA	114153025	114099192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_114099266_114103600_114103722_114137494_114138054_114139614_114139881_114152765
transcript_123643.known	chr2	-	2978	14	FSM	ENSG00000115053.17	ENST00000453992.6	2978	14	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_13	1384.00250966014	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCATGGTTTTTGCTTCA	-231464164	False	133629	-29	True	AAGAAA	-16	NA	231464180	231454807	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_231455268_231455400_231455625_231456009_231456137_231456630_231456765_231457000_231457125_231457642_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231463700
transcript_123644.known	chr2	-	2155	14	FSM	ENSG00000115053.17	ENST00000454824.6	2155	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	1400.1145092646	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTCCCTCTGCTTTCC	-231464183	False	NA	NA	False	NA	NA	NA	231464199	231455190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_231455268_231455400_231455625_231456009_231456137_231456630_231456765_231457000_231457125_231457642_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231464159
transcript_123645.known	chr2	-	2653	14	FSM	ENSG00000115053.17	ENST00000679348.1	2653	14	0	0	0	0	multi-exon	FALSE	canonical	2	101	junction_13	1375.09158382463	1164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCATGGTTTTTGCTTCA	-231330865	True	NA	-29	True	AAGAAA	-16	NA	231464494	231454807	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_231455268_231455400_231455625_231456009_231456137_231456630_231456765_231457000_231457125_231457642_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463313_231464335
transcript_123651.known	chr2	-	2674	14	FSM	ENSG00000115053.17	ENST00000678246.1	2674	14	0	0	0	0	multi-exon	TRUE	canonical	2	61	junction_1	1364.87128378532	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACGTGTTACTTCCTAAA	-231330889	True	NA	-21	True	ATTAAA	-16	NA	231464518	231454751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_231455262_231455457_231455625_231456009_231456137_231456630_231456765_231457000_231457125_231457642_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231464335
transcript_123656.known	chr2	-	2666	14	FSM	ENSG00000115053.17	ENST00000678828.1	2666	14	0	0	0	0	multi-exon	FALSE	canonical	2	115	junction_7	1371.58385963953	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTGTTACTTCCTAAAGAG	-231330860	True	NA	-18	True	ATTAAA	-19	NA	231464489	231454748	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_231455268_231455400_231455625_231456009_231456137_231456630_231456765_231457000_231457125_231457642_231457801_231458265_231458345_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231464335
transcript_123703.known	chr2	-	3389	12	FSM	ENSG00000115053.17	ENST00000676798.1	3389	12	0	0	0	0	multi-exon	FALSE	canonical	3	4027	junction_6	524.040484840691	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACGTGTTACTTCCTAAAG	-231330889	True	NA	-20	True	ATTAAA	-17	NA	231464518	231454750	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_231455625_231456009_231456137_231456630_231456765_231457000_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231464335
transcript_123731.nic	chr2	-	896	4	ISM	ENSG00000115053.17	ENST00000677786.1	4129	9	10	5496	10	2220	5prime_fragment	FALSE	canonical	3	4254	junction_2	159.538918971725	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGAAGAAGAGGATGATGA	-231464525	False	NA	-7	True	NA	NA	NA	231464541	231460771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_231460867_231461539_231462018_231463199_231463317_231464335
transcript_123739.known	chr2	-	369	2	FSM	ENSG00000115053.17	ENST00000484328.1	369	2	0	0	0	0	multi-exon	FALSE	canonical	3	4283	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTACATGTTCCTCTGCA	-231464363	False	NA	NA	False	NA	NA	NA	231464379	231462991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_231463317_231464335
transcript_123740.known	chr2	-	2666	14	FSM	ENSG00000115053.17	ENST00000678405.1	2666	14	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	1398.14484439816	1434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTTTTGTTTTTGTT	-231464535	False	NA	68	True	NA	NA	NA	231464551	231454878	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_231455268_231455400_231455625_231456009_231456160_231456630_231456765_231457000_231457125_231457642_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231464335
transcript_123741.known	chr2	-	1281	3	FSM	ENSG00000181798.4	ENST00000313064.4	1325	3	44	0	33	0	multi-exon	FALSE	canonical	2	13	junction_2	5.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTGTTGTGGCTCATAC	-231513301	True	NA	NA	False	AATAAA	-13	NA	231514352	231508424	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_231509344_231513526_231513633_231514096
transcript_123744.known	chr2	-	3221	3	FSM	ENSG00000171596.7	ENST00000305141.5	3221	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTAACAGTGGCATGTTT	-231530402	True	NA	NA	False	ATTAAA	-24	NA	231530445	231523186	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_231525426_231528122_231529018_231530358
transcript_123746.known	chr2	+	784	5	FSM	ENSG00000187514.17	ENST00000466801.5	784	5	0	0	0	0	multi-exon	FALSE	canonical	3	454	junction_1	11521.9495312208	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAACCCAAACCATGAGAAT	231706864	False	NA	154	True	NA	NA	NA	231706894	231713013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231707229_231711347_231711420_231711889_231711984_231712442_231712517_231712803
transcript_123748.known	chr2	+	1108	5	FSM	ENSG00000187514.17	ENST00000448874.5	1108	5	0	0	0	0	multi-exon	FALSE	canonical	2	299	junction_1	11588.2318835748	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTTGATGTATGTGTGA	231707616	False	NA	39	True	NA	NA	NA	231707629	231713465	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231707836_231711347_231711420_231711889_231711984_231712442_231712517_231712803
transcript_12375.known	chr1	-	8369	20	FSM	ENSG00000197323.12	ENST00000358465.7	8369	20	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_2	16.6940864013465	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCAAATGAATTTCTTT	-114508872	True	NA	NA	False	ATTAAA	-17	NA	114511203	114392789	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_114397861_114397939_114397991_114399456_114399610_114401388_114401464_114402759_114402884_114405409_114405760_114406940_114407101_114408676_114408741_114410183_114410317_114421435_114421637_114424590_114424756_114425448_114425724_114427176_114427295_114427747_114427895_114430797_114430913_114433616_114433734_114463103_114463237_114463411_114463557_114464269_114464389_114510550
transcript_123754.known	chr2	+	933	5	FSM	ENSG00000187514.17	ENST00000409683.5	933	5	0	0	0	0	multi-exon	TRUE	canonical	1	80	junction_3	11844.4045940478	6060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGCAAAAATGACAACAGAAA	231289389	True	NA	NA	False	NA	NA	NA	231708535	231713289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231708752_231711347_231711420_231711889_231711984_231712451_231712517_231712803
transcript_123764.known	chr2	+	621	4	FSM	ENSG00000187514.17	ENST00000468027.5	621	4	0	0	0	0	multi-exon	FALSE	canonical	3	23814	junction_2	2101.00711300293	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCCAGAGGCCTTGGGC	231289383	True	NA	NA	False	NA	NA	NA	231708529	231712675	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231708752_231711347_231711420_231711889_231711984_231712442
transcript_123773.known	chr2	+	1635	4	FSM	ENSG00000187514.17	ENST00000481928.1	1635	4	0	0	0	0	multi-exon	FALSE	canonical	3	27716	junction_2	447.621119549409	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGAATTTTATTTTGCTG	231289383	True	NA	-35	True	NA	NA	NA	231708529	231713506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231708752_231711347_231711984_231712442_231712517_231712803
transcript_12378.known	chr1	-	3457	19	FSM	ENSG00000197323.12	ENST00000369543.6	3457	19	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	29.8142396999972	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CGAAAAAAAAAAAAAAAACA	-114508829	True	NA	NA	False	AGTAAA	-40	NA	114511160	114397607	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_114397861_114399456_114399610_114401388_114401464_114402759_114402884_114405409_114405760_114406940_114407101_114408676_114408741_114410183_114410317_114421435_114421637_114424590_114424756_114425448_114425724_114427176_114427295_114427747_114427895_114430797_114430913_114433616_114433734_114463103_114463237_114463411_114463557_114464269_114464389_114510550
transcript_123804.known	chr2	+	2563	8	FSM	ENSG00000144524.18	ENST00000373608.7	2563	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	441.273944254078	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCTCATTGGAAATTCAT	231779638	True	NA	8	True	AATAAA	-22	NA	231786447	231809253	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231786539_231788554_231788733_231791732_231791809_231794262_231794352_231796105_231796309_231798858_231798965_231801154_231801208_231807486
transcript_123807.known	chr2	+	1103	7	FSM	ENSG00000144524.18	ENST00000410024.5	1103	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	354.833020197138	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGCAGTGAGTTCCAGA	231781659	False	NA	NA	False	NA	NA	NA	231781670	231807724	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231781884_231788554_231788733_231791732_231791809_231794262_231794352_231796105_231796309_231798858_231798965_231807486
transcript_123809.known	chr2	+	2513	7	FSM	ENSG00000144524.18	ENST00000350033.8	2513	7	0	0	0	0	multi-exon	FALSE	canonical	3	898	junction_3	75.4160681375881	1058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCTCATTGGAAATTCAT	231779635	True	NA	8	True	AATAAA	-22	NA	231786444	231809253	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231786539_231788554_231788733_231791732_231791809_231794262_231794352_231796105_231796309_231798858_231798965_231807486
transcript_12381.nic	chr1	-	3170	17	ISM	ENSG00000197323.12	ENST00000369543.6	3457	19	-119	3781	-76	2937	5prime_fragment	FALSE	canonical	3	152	junction_9	14.8879932747835	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTGCCTACCTTAGTA	-114511266	False	NA	NA	False	NA	NA	NA	114511279	114401388	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_114401464_114402759_114402884_114405409_114405760_114406940_114407101_114408676_114408741_114410183_114410317_114421435_114421637_114424590_114424756_114425448_114425724_114427176_114427295_114427747_114427895_114430797_114430913_114433616_114433734_114463103_114463237_114463411_114463557_114464269_114464389_114510550
transcript_123818.known	chr2	+	1935	6	FSM	ENSG00000144524.18	ENST00000412922.6	1935	6	0	0	0	0	multi-exon	FALSE	canonical	1	34	junction_3	384.978648758603	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCACCTGGTTGGAGGGT	231779635	True	NA	50	True	NA	NA	NA	231786444	231808764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231786539_231788554_231788733_231791732_231791809_231796105_231796309_231798858_231798965_231807486
transcript_123819.known	chr2	+	2442	6	FSM	ENSG00000144524.18	ENST00000413197.5	2442	6	0	0	0	0	multi-exon	TRUE	canonical	3	65	junction_2	390.016204791545	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCATATCCTCATTGGAA	231779624	True	NA	2	True	AATAAA	-16	NA	231786433	231809247	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231786539_231788554_231788733_231794262_231794352_231796105_231796309_231798858_231798965_231807486
transcript_123828.known	chr2	-	1140	5	FSM	ENSG00000156973.14	ENST00000287600.9	1140	5	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_4	11.9660979437743	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGGCACTGCTTTTATCT	-231777760	True	NA	-5	True	ATTAAA	-32	NA	231781282	231732432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_231733034_231737186_231737293_231738012_231738139_231739099_231739189_231781064
transcript_123831.known	chr2	-	672	4	FSM	ENSG00000156973.14	ENST00000409772.5	672	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	119.04714285619	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTGTAGGTAACCAGAT	-231777769	True	NA	NA	False	NA	NA	NA	231781291	231732803	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_231733034_231738012_231738139_231739099_231739189_231781064
transcript_123833.known	chr2	+	689	2	FSM	ENSG00000144524.18	ENST00000492423.5	689	2	0	0	0	0	multi-exon	FALSE	canonical	3	1071	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGTATTGTTCTTGAGG	231779635	True	NA	NA	False	NA	NA	NA	231786444	231789149	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231786539_231788554
transcript_123834.known	chr2	-	996	2	FSM	ENSG00000156973.14	ENST00000477748.1	996	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCATTGGAATTCCAGCCC	-231777760	True	NA	NA	False	NA	NA	NA	231781282	231778722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_231779501_231781064
transcript_123835.known	chr2	-	1055	3	FSM	ENSG00000163273.4	ENST00000409852.2	1055	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTTATTTACTTGTTG	-231926322	True	NA	NA	False	AAAAAG	-24	NA	231926396	231921808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_231922316_231925404_231925716_231926159
transcript_123839.nic	chr2	+	3410	21	NIC	ENSG00000144535.20	novel	4671	24	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_20	17.5239835653883	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGTGTAGGGCGCCTC	231960558	True	NA	8	True	AATAAA	-19	NA	231961708	232336977	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_231961766_232014834_232014980_232015513_232015672_232024276_232024331_232029978_232030081_232087486_232087722_232130618_232130720_232136471_232136720_232163458_232163633_232210325_232210406_232238532_232238646_232249238_232249347_232263206_232263441_232300039_232300120_232329812_232329997_232330689_232330777_232333839_232333988_232334368_232334500_232334630_232334736_232335772_232335875_232336213
transcript_123840.known	chr2	+	3366	21	FSM	ENSG00000144535.20	ENST00000325385.12	3366	21	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_7	12.8237085119711	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGAGAGCGCCCCCATCA	231960562	True	NA	4	True	ATTAAA	-19	NA	231961712	232337192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231961766_232014834_232014980_232015513_232015672_232024276_232024331_232029978_232030081_232087486_232087722_232130618_232130720_232136471_232136720_232163458_232163633_232210325_232210406_232238532_232238646_232249238_232249347_232263206_232263441_232300039_232300120_232329812_232329997_232330689_232330777_232333839_232333988_232334368_232334500_232334630_232334736_232335772_232335875_232336468
transcript_12385.known	chr1	-	1275	7	FSM	ENSG00000116752.6	ENST00000369541.4	1275	7	0	0	0	0	multi-exon	FALSE	canonical	3	606	junction_3	49.4887753827965	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGGAGGCGGTTACTGT	-114575492	True	NA	-4	True	AATAAA	-23	NA	114581615	114567556	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_114568257_114569991_114570073_114570699_114570751_114575589_114575752_114576687_114576759_114581298_114581392_114581498
transcript_123852.known	chr2	+	2048	7	FSM	ENSG00000144535.20	ENST00000409401.7	2048	7	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	11.6440256498057	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTTTGACCTGTGCA	231961670	False	NA	NA	False	AATGAA	-35	NA	231961683	232131890	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231961766_232014834_232014980_232015513_232015672_232024276_232024331_232029978_232030081_232087486_232087722_232130618
transcript_123853.known	chr2	+	3201	14	FSM	ENSG00000144535.20	ENST00000273009.10	3201	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	19.8711827862723	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTGACGTATGTATGCATT	NA	False	NA	20	True	GGGGCT	-32	NA	231961244	232344350	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_231961766_232014834_232014980_232015513_232015672_232024276_232024331_232029978_232030081_232087486_232087722_232130618_232130720_232136471_232136720_232163458_232163633_232210325_232210406_232238532_232238646_232249238_232249347_232263206_232263363_232343344
transcript_123854.known	chr2	+	2492	11	FSM	ENSG00000163286.9	ENST00000295453.8	2492	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	2.18174242292714	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAGTACTACTTCCTAGC	232406767	True	NA	10	True	AATAAA	-22	NA	232406843	232410714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_232406962_232407056_232407174_232407285_232407402_232407593_232407769_232407844_232408018_232408266_232408402_232408500_232408574_232408703_232408839_232408920_232409113_232409331_232409449_232409573
transcript_12387.known	chr1	-	891	6	FSM	ENSG00000116752.6	ENST00000485021.1	891	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_4	262.827243641142	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATAATATTGTGTCATAG	-114575506	True	NA	-109	True	CATAAA	-37	NA	114581629	114567883	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_114568257_114569991_114570073_114570699_114570751_114575589_114575752_114581298_114581392_114581498
transcript_123877.known	chr2	-	2871	18	FSM	ENSG00000171551.12	ENST00000304546.6	2871	18	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_15	16.1855589442904	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGCCTCTTCACGGGT	-232487265	True	NA	-2	True	AATAAA	-14	NA	232487834	232479826	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_232480253_232480398_232480476_232480717_232480814_232481090_232481157_232481505_232481631_232481781_232481850_232482417_232482470_232482549_232482609_232482850_232482955_232483104_232483180_232483415_232483515_232484000_232484224_232484471_232484597_232484800_232484894_232484980_232485092_232485198_232485268_232485867_232486755_232487718
transcript_123878.nnic	chr2	-	3018	18	NNC	ENSG00000171551.12	novel	2871	18	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	40.9666080580092	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGCCTCTTCACGGGT	-232487298	True	NA	-2	True	AATAAA	-14	NA	232487867	232479826	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_-_232480253_232480398_232480476_232480717_232480814_232481090_232481157_232481505_232481631_232481781_232481850_232482417_232482470_232482549_232482609_232482850_232482955_232483104_232483180_232483415_232483515_232484000_232484224_232484471_232484597_232484800_232484894_232484980_232485092_232485198_232485268_232485867_232486869_232487718
transcript_123882.known	chr2	-	2965	17	FSM	ENSG00000171551.12	ENST00000482346.1	2965	17	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_16	14.1508336768545	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGCCTCTTCACGGGT	-232487252	True	NA	-2	True	AATAAA	-14	NA	232487821	232479826	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_232480253_232480398_232480476_232480717_232480814_232481090_232481157_232481505_232481631_232481781_232481850_232482417_232482470_232482549_232482609_232482850_232482955_232483104_232483180_232483415_232483515_232484000_232484224_232484471_232484597_232484800_232484894_232484980_232485268_232485867_232486755_232487718
transcript_123905.known	chr2	+	2962	12	FSM	ENSG00000135902.10	ENST00000258385.8	2962	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.642824346533225	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACGTTTTGGTGTCATTTG	NA	False	NA	NA	False	AATAAA	-20	NA	232526159	232536664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_232526268_232526528_232526675_232527400_232527446_232528261_232528372_232528500_232528657_232528861_232528972_232529938_232530140_232531351_232531464_232531541_232531657_232533930_232534136_232534223_232534343_232535129
transcript_123908.known	chr2	+	3525	8	FSM	ENSG00000135930.15	ENST00000409514.5	3525	8	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_7	578.803057690469	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGGTCGTGGACTTGTC	232531504	True	NA	25	True	AATAAA	-18	NA	232550682	232583642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_232550745_232556415_232556531_232557883_232558019_232564246_232564352_232566828_232566982_232567077_232567215_232574262_232574342_232580903
transcript_123910.known	chr2	+	967	7	FSM	ENSG00000135930.15	ENST00000258416.8	967	7	0	0	0	0	multi-exon	FALSE	canonical	3	1059	junction_6	116.896915651735	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTCTCATGCTCTTGCT	232531510	True	NA	15	True	AATAAA	-14	NA	232550688	232569210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_232550745_232556415_232556531_232557883_232558019_232564246_232564352_232566828_232566982_232567077_232567215_232568944
transcript_123912.known	chr2	+	3448	7	FSM	ENSG00000135930.15	ENST00000409098.5	3448	7	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_6	406.824969188908	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTCGTGGACTTGTCAA	232531504	True	NA	27	True	AATAAA	-20	NA	232550682	232583644	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_232550745_232556415_232556531_232557883_232558019_232564246_232564352_232566828_232566982_232567077_232567215_232580903
transcript_123915.known	chr2	+	1014	6	FSM	ENSG00000135930.15	ENST00000409495.6	2693	6	0	1679	0	322	multi-exon	FALSE	canonical	3	1202	junction_5	75.1345459825239	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTCTTTTTCTTGCTG	232531510	True	NA	NA	False	AATGAA	-8	NA	232550688	232567527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_232550745_232556415_232556531_232557883_232558019_232564246_232564352_232566828_232566982_232567077
transcript_123916.known	chr2	+	797	6	FSM	ENSG00000135930.15	ENST00000409322.5	797	6	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_2	462.961337478628	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTGAGATCACTTAATAAAT	232531513	True	NA	-17	True	NA	NA	NA	232550691	232569178	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_232550745_232556415_232556531_232564246_232564352_232566828_232566982_232567077_232567215_232568944
transcript_123917.known	chr2	+	604	6	FSM	ENSG00000135930.15	ENST00000409394.5	604	6	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_2	559.087327704716	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAATAATCCTTTTCTGTA	232531525	True	NA	11	True	AATACA	-29	NA	232550703	232580956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_232550745_232556415_232556531_232564246_232564352_232566828_232566982_232567077_232567215_232580903
transcript_123919.known	chr2	+	1372	5	FSM	ENSG00000135930.15	ENST00000409167.8	2550	5	0	1178	0	815	multi-exon	FALSE	canonical	3	137	junction_2	517.334756226566	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTTCTCCATCTGTAAAG	232531510	True	NA	NA	False	NA	NA	NA	232550688	232568020	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_232550745_232556415_232556531_232564246_232564352_232566828_232566982_232567077
transcript_123920.known	chr2	+	1878	4	FSM	ENSG00000115468.13	ENST00000264059.8	1878	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	4.78423336480244	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTACAGCTATTTCTTTTT	232633064	True	NA	8	True	AATAAA	-20	NA	232633603	232682776	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_232634007_232662801_232662950_232672308_232672444_232681584
transcript_123924.known	chr2	+	7816	29	FSM	ENSG00000204120.16	ENST00000373563.9	7816	29	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	31.9149859240234	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTCTGTACTGTCCTTC	232690740	True	NA	NA	False	ATTAAA	-24	NA	232697330	232860605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_232697393_232703423_232703490_232735154_232735239_232747614_232747745_232748986_232749083_232756222_232756335_232760479_232760592_232761395_232761437_232787149_232787330_232790697_232790916_232791007_232791171_232791257_232791447_232794747_232794945_232796061_232796222_232806490_232806658_232809719_232809812_232811243_232811352_232812390_232812492_232815636_232815738_232816870_232817033_232819826_232819986_232832856_232833094_232839848_232839972_232844045_232844256_232844368_232844575_232845731_232845887_232847347_232847572_232850261_232850410_232856792
transcript_123935.nic	chr2	+	3478	25	ISM	ENSG00000204120.16	ENST00000373563.9	7816	29	-32	16061	0	0	5prime_fragment	FALSE	canonical	3	105	junction_1	29.2218228479258	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAATAAAAACAACG	232690708	True	NA	NA	False	NA	NA	NA	232697298	232844544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_232697393_232703423_232703490_232735154_232735239_232747614_232747745_232748986_232749083_232756222_232756335_232760479_232760592_232761395_232761437_232787149_232787330_232790697_232790916_232791007_232791171_232791257_232791447_232794747_232794945_232796061_232796222_232806490_232806658_232809719_232809812_232811243_232811352_232812390_232812492_232815636_232815738_232816870_232817033_232819826_232819986_232832856_232833094_232839848_232839972_232844045_232844256_232844368
transcript_123944.nic	chr2	+	2742	22	NIC	ENSG00000204120.16	novel	5976	31	NA	NA	0	-57	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	47.9430406565154	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGAGGAGAAGAGAAGA	232690708	True	NA	47	True	AAGAAA	-33	NA	232697298	232819925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_232697393_232700584_232700655_232703423_232703490_232735154_232735239_232747614_232747745_232748986_232749083_232756222_232756335_232760479_232760592_232761395_232761437_232787149_232787330_232790697_232790916_232791007_232791171_232791257_232791447_232794747_232794945_232796061_232796222_232806490_232806658_232809719_232809812_232811243_232811352_232812390_232812492_232815636_232815738_232816870_232817033_232819826
transcript_123947.known	chr2	+	2658	21	FSM	ENSG00000204120.16	ENST00000440945.5	2658	21	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_9	40.9920419105953	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGACCAGATGGTTTTG	232690761	True	NA	104	True	AAGAAA	-30	NA	232697351	232819982	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_232697393_232703423_232703490_232735154_232735239_232747614_232747745_232748986_232749083_232756222_232756335_232760479_232760592_232761395_232761437_232787149_232787330_232790715_232790916_232791007_232791171_232791257_232791447_232794747_232794945_232796061_232796222_232806490_232806658_232809719_232809812_232811243_232811352_232812390_232812492_232815636_232815738_232816870_232817033_232819826
transcript_123948.nic	chr2	+	2534	20	ISM	ENSG00000204120.16	ENST00000373563.9	7816	29	-32	43612	0	0	5prime_fragment	TRUE	canonical	3	105	junction_1	24.5599498316685	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGGCGAGAGGAAGAAGA	232690708	True	NA	2	True	AAGAAA	-3	NA	232697298	232816993	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_232697393_232703423_232703490_232735154_232735239_232747614_232747745_232748986_232749083_232756222_232756335_232760479_232760592_232761395_232761437_232787149_232787330_232790697_232790916_232791007_232791171_232791257_232791447_232794747_232794945_232796061_232796222_232806490_232806658_232809719_232809812_232811243_232811352_232812390_232812492_232815636_232815738_232816870
transcript_123954.nic	chr2	+	2445	19	NIC	ENSG00000204120.16	novel	7816	29	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	34.0036762718386	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGGCGAGAGGAAGAAGA	232690731	True	NA	2	True	AAGAAA	-3	NA	232697321	232816993	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_232697393_232735154_232735239_232747614_232747745_232748986_232749083_232756222_232756335_232760479_232760592_232761395_232761437_232787149_232787330_232790697_232790916_232791007_232791171_232791257_232791447_232794747_232794945_232796061_232796222_232806490_232806658_232809719_232809812_232811243_232811352_232812390_232812492_232815636_232815738_232816870
transcript_123961.known	chr2	-	2286	13	FSM	ENSG00000066248.15	ENST00000373552.8	2286	13	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_11	13.3374993491617	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAAGGGGGTGGGCACAC	-232928085	True	NA	NA	False	NA	NA	NA	232928154	232879214	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_232879680_232881145_232881251_232882185_232882266_232883310_232883467_232883980_232884145_232885279_232885370_232888032_232888108_232891357_232891488_232892897_232893051_232894755_232894917_232920283_232920586_232927043_232927187_232927892
transcript_123962.nic	chr2	-	1755	8	NIC	ENSG00000066248.15	novel	3184	15	NA	NA	-59	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	8.48287590817344	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATGAAGGTCTACTCTT	-232890741	True	NA	-14	True	AATAAA	-1	NA	232891039	232878700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_232879680_232881145_232881251_232882185_232882266_232883310_232883467_232883980_232884145_232885279_232885370_232888032_232888108_232890933
transcript_123964.known	chr2	+	2782	2	FSM	ENSG00000182600.9	ENST00000467665.1	2782	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATATATGATGCTTCTT	232875737	True	NA	23	True	AATAAA	-23	NA	232875798	232878704	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_232876123_232876246
transcript_123966.known	chr2	+	660	2	FSM	ENSG00000182600.9	ENST00000481155.1	660	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATGATGCTTCTTTTAA	232876459	False	NA	27	True	AATAAA	-27	NA	232876520	232878708	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_232876924_232878451
transcript_123968.nnic	chr2	+	4226	23	NNC	ENSG00000168918.14	novel	3628	17	NA	NA	17276	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	16.5801334869862	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGTGTGGCGTTTTT	NA	False	NA	19	True	AATAAA	-19	NA	233139491	233207903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_233139618_233139841_233139930_233146161_233146243_233146366_233146439_233147470_233147595_233158312_233158420_233161723_233161827_233163706_233163904_233164306_233164425_233169304_233169402_233170025_233170165_233170495_233170605_233171063_233171153_233177264_233177347_233182409_233182500_233184407_233184522_233185842_233185926_233189849_233189938_233193811_233193962_233195398_233195496_233198094_233198377_233204125_233204718_233206705
transcript_123975.nic	chr2	+	4326	22	ISM	ENSG00000168918.14	ENST00000445964.6	4902	27	79274	0	17400	0	3prime_fragment	FALSE	canonical	3	63	junction_5	8.75387831121317	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGTGTGGCGTTTTT	233139585	False	NA	19	True	AATAAA	-19	NA	233139615	233207903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_233139930_233146161_233146243_233146366_233146439_233147470_233147595_233158312_233158420_233161723_233161827_233163706_233163904_233164306_233164425_233169304_233169402_233170025_233170165_233170495_233170605_233171063_233171153_233177264_233177347_233182409_233182500_233184407_233184522_233185842_233185926_233189849_233189938_233193811_233193962_233195398_233195496_233198094_233198377_233204125_233204718_233206705
transcript_12398.known	chr1	-	4326	7	FSM	ENSG00000213281.5	ENST00000369535.5	4326	7	0	0	0	0	multi-exon	FALSE	canonical	3	1155	junction_3	78.3744572903415	196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTATATTCACTGAAGTG	-114701486	True	NA	-7	True	AATAAA	-28	NA	114716771	114704468	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_114708051_114708153_114708193_114708530_114708655_114709568_114709729_114713799_114713979_114716049_114716178_114716657
transcript_123990.known	chr2	+	3301	18	FSM	ENSG00000085978.22	ENST00000392021.7	3301	18	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	41.0983292161599	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCTTGGTGATTATTTT	233248100	True	NA	24	True	AATAAA	-30	NA	233251672	233295674	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_233251941_233256101_233256196_233263129_233263236_233263991_233264066_233264891_233265144_233270001_233270068_233272965_233273053_233273720_233273778_233274675_233274779_233277567_233277674_233281104_233281176_233282681_233282754_233289853_233289975_233290247_233290354_233292127_233292278_233292386_233292435_233293255_233293358_233294256
transcript_123994.known	chr2	+	3559	17	FSM	ENSG00000085978.22	ENST00000479942.5	3559	17	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_8	31.8855374739081	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCCATGCCTCTTGGTG	233248109	True	NA	16	True	AATAAA	-22	NA	233251681	233295666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_233251943_233256101_233256196_233263129_233263236_233263991_233264066_233264891_233265144_233270001_233270068_233272965_233273053_233273720_233273778_233274675_233274779_233277567_233277674_233281104_233281176_233282681_233282754_233289853_233290354_233292127_233292278_233292386_233292435_233293255_233293358_233294256
transcript_123998.known	chr2	+	3213	17	FSM	ENSG00000085978.22	ENST00000392020.8	3213	17	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_7	18.0449741964349	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCTTGGTGATTATTTT	233248133	True	NA	24	True	AATAAA	-30	NA	233251705	233295674	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_233251943_233256101_233256196_233263129_233263236_233263991_233264066_233264891_233265144_233270001_233270068_233272965_233273053_233274675_233274779_233277567_233277674_233281104_233281176_233282681_233282754_233289853_233289975_233290247_233290354_233292127_233292278_233292386_233292435_233293255_233293358_233294256
transcript_124.known	SIRV4	+	1567	3	FSM	SIRV4C	SIRV409	1567	3	0	0	0	0	multi-exon	FALSE	canonical	3	1031	junction_1	44.5	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATTGTAACCTGTCAAG	NA	False	NA	NA	False	NA	NA	NA	1000	3403	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV4_+_1347_1678_1886_2389
transcript_124005.nic	chr2	+	3008	16	NIC	ENSG00000085978.22	novel	3298	18	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	36.726859683646	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATGCCTCTTGGTGATT	233248081	True	NA	19	True	AATAAA	-25	NA	233251653	233295669	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_233251943_233256101_233256196_233263129_233263236_233263991_233264066_233270001_233270068_233272965_233273053_233274675_233274779_233277567_233277674_233281104_233281176_233282681_233282754_233289853_233289975_233290247_233290354_233292127_233292278_233292386_233292435_233293255_233293358_233294256
transcript_124011.nic	chr2	+	2876	15	NIC	ENSG00000085978.22	novel	3298	18	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_2	45.254439403381	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATGCCTCTTGGTGATT	233248090	True	NA	19	True	AATAAA	-25	NA	233251662	233295669	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_233251943_233256101_233256196_233270001_233270068_233272965_233273053_233273720_233273778_233274675_233274779_233277567_233277674_233281104_233281176_233282681_233282754_233289853_233289975_233290247_233290354_233292127_233292278_233292386_233292435_233293255_233293358_233294256
transcript_124013.known	chr2	+	2915	14	FSM	ENSG00000085978.22	ENST00000347464.9	2915	14	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_2	38.4635384095412	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTCTTGGTGATTATTT	NA	False	NA	23	True	AATAAA	-29	NA	233251570	233295673	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_233251943_233256101_233256196_233270001_233270068_233272965_233273053_233274675_233274779_233277567_233277674_233281104_233281176_233282681_233282754_233289853_233289975_233290247_233290354_233292127_233292278_233292386_233292435_233293255_233293358_233294256
transcript_124015.known	chr2	+	276	1	FSM	ENSG00000252010.1	ENST00000516201.1	276	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCTAAGGAGAAAGAAACCA	233275712	True	NA	NA	False	NA	NA	NA	233275726	233276002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_233275700_233276000
transcript_124016.known	chr2	+	6308	30	FSM	ENSG00000077044.11	ENST00000264057.7	6308	30	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_21	14.7974834766382	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCCAGAGTCTTTGTCATC	233352539	True	NA	12	True	AATAAA	-24	NA	233354493	233472098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_233354675_233388256_233388368_233390402_233390484_233434379_233434485_233434768_233434902_233435817_233435925_233436315_233436442_233437376_233437480_233438216_233438380_233441886_233441996_233445622_233445763_233446711_233446797_233448086_233448182_233448275_233448376_233449102_233449377_233449981_233450132_233450921_233451051_233451963_233452061_233454762_233454874_233456898_233456996_233457220_233457329_233458283_233458398_233459756_233459892_233460193_233460346_233462347_233462460_233462642_233462736_233464163_233464284_233467085_233467204_233468422_233468554_233469370
transcript_12402.known	chr1	-	4312	21	FSM	ENSG00000009307.17	ENST00000610726.5	4274	21	-36	-2	-23	-1	multi-exon	FALSE	canonical	1	5	junction_18	1149.7974560765	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTAGCGCTTTCATTATTG	-114716341	True	NA	-1	True	AATAAA	-27	NA	114758050	114716913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737470_114737564_114737962_114738073_114739691_114739891_114741526_114741674_114749820_114750208_114757924
transcript_124026.known	chr2	-	794	6	FSM	ENSG00000085982.15	ENST00000427947.7	794	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	3.72021504754765	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTTGTATGAAAAAGTCT	-233566402	True	NA	NA	False	NA	NA	NA	233566710	233554324	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_233554527_233556854_233557020_233559810_233559925_233562735_233562804_233565355_233565574_233566683
transcript_124029.known	chr2	-	3157	9	FSM	ENSG00000123485.12	ENST00000411486.7	3157	9	0	0	0	0	multi-exon	FALSE	canonical	3	492	junction_5	46.9068225314826	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGAGTTTGGGTTTTTTTT	-233841490	True	NA	-4	True	AGTAAA	-18	NA	233854535	233836701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_233837653_233840608_233842206_233844204_233844284_233845727_233845821_233847396_233847462_233849762_233849860_233852564_233852621_233853843_233853911_233854383
transcript_124030.known	chr2	-	3027	7	FSM	ENSG00000123485.12	ENST00000432087.5	3027	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	210.424504804508	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGTTTGGGTTTTTTTTT	-233841521	True	NA	-3	True	AGTAAA	-19	NA	233854566	233836700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_233837653_233840608_233842206_233844204_233844284_233845727_233845821_233852564_233852621_233853843_233853911_233854383
transcript_124031.known	chr2	-	2032	2	FSM	ENSG00000224287.2	ENST00000438684.1	2032	2	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACTTGGAGTCATAACTA	NA	False	NA	NA	False	AATAAA	-24	NA	233868444	233865436	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_233867351_233868326
transcript_124035.known	chr2	+	5150	6	FSM	ENSG00000130147.16	ENST00000392011.7	5150	6	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_5	13.7462722219517	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTACGTATTTATACATACA	234949375	True	NA	11	True	AATAAA	-18	NA	234952016	235055714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_234952171_234995302_234995377_235034870_235035121_235040887_235043248_235052561_235052751_235053591
transcript_124039.nnic	chr2	+	647	3	FSM	ENSG00000233611.4	ENST00000685281.1	676	3	18	11	-6	-11	multi-exon	TRUE	canonical	3	45	junction_2	8.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTATCGACCCGATTCT	236166487	True	NA	17	True	GATAAA	-18	NA	236167435	236169789	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_236167670_236169232_236169385_236169528
transcript_124040.nnic	chr2	+	961	2	FSM	ENSG00000233611.4	ENST00000686834.1	961	2	-3	3	-3	-3	multi-exon	FALSE	canonical	3	36	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCAGTCTCAGGTATGT	236166490	True	NA	6	True	AATAAA	-18	NA	236167438	236221636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_236167670_236220906
transcript_124046.known	chr2	-	2140	2	FSM	ENSG00000168505.7	ENST00000306318.5	2140	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGGGCCTCATAAGTGT	-236167711	True	NA	-12	True	AATAAA	-28	NA	236168386	236165235	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_236166438_236167448
transcript_124047.known	chr2	-	896	2	FSM	ENSG00000168505.7	ENST00000465889.1	896	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACACCAGAAGACACGCTA	-236166654	False	675	-70	True	AATATA	-45	NA	236167329	236165733	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_236166438_236167137
transcript_124048.known	chr2	-	3155	18	FSM	ENSG00000132321.17	ENST00000309507.9	3155	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	7.0367301308389	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGTAATTTGGTTGCTGG	-236506979	True	NA	1	True	AATAAA	-20	NA	236507535	236324146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_236324784_236331358_236331598_236338204_236338383_236344556_236344644_236363779_236363980_236368193_236368302_236377102_236377186_236380568_236380634_236391975_236392072_236392243_236392351_236399412_236399489_236441039_236441125_236465504_236465711_236486828_236486901_236487999_236488192_236493767_236493888_236497162_236497488_236507256
transcript_124051.known	chr2	-	3336	20	FSM	ENSG00000132321.17	ENST00000254653.9	3336	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	7.40591962077384	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTCGGTAATTTGGTTG	-236506976	True	NA	-3	True	AATAAA	-16	NA	236507532	236324150	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_236324784_236331358_236331598_236338204_236338383_236343701_236343764_236344556_236344644_236363779_236363980_236368193_236368302_236377102_236377186_236380568_236380637_236391975_236392072_236392243_236392351_236399412_236399489_236419148_236419272_236441039_236441125_236465504_236465711_236486828_236486901_236487999_236488192_236493767_236493888_236497162_236497488_236507256
transcript_124053.known	chr2	+	1654	9	FSM	ENSG00000198612.11	ENST00000392008.6	1654	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	515.075707420763	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAACTTAAGGTTATAACAG	237075185	True	NA	-48	True	NA	NA	NA	237085881	237098618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_237086043_237086731_237086797_237087126_237087198_237088604_237088654_237089861_237089995_237094089_237094198_237095821_237095885_237096821_237096870_237097662
transcript_124056.known	chr2	+	3438	8	FSM	ENSG00000198612.11	ENST00000354371.7	3438	8	0	0	0	0	multi-exon	FALSE	canonical	3	1124	junction_7	67.4555030961832	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATTTCCAATGTGTTCT	237075192	True	NA	17	True	AATAAA	-25	NA	237085888	237100474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_237086043_237087126_237087198_237088604_237088654_237089861_237089995_237094089_237094198_237095821_237095885_237096821_237096870_237097662
transcript_124067.known	chr2	+	3744	16	FSM	ENSG00000115648.14	ENST00000264605.8	3744	16	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	10.0323919824182	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCCTAGCAGATGGCTAT	237486734	True	NA	NA	False	AATAAA	-27	NA	237487250	237555322	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_237487438_237493402_237493537_237510573_237510796_237510988_237511102_237518538_237518649_237519909_237520030_237525600_237525806_237527376_237527517_237534563_237534648_237540347_237540534_237540801_237540958_237542566_237542660_237546605_237546684_237549220_237549279_237552336_237552438_237553565
transcript_124068.nnic	chr2	+	2566	16	NNC	ENSG00000115648.14	novel	2332	15	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	10.0761544692848	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATATGTGTATTCTTGAT	237486689	True	NA	21	True	AAAAAG	-21	NA	237487205	237553994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_237487438_237493402_237493537_237510573_237510796_237510988_237511102_237518538_237518649_237519909_237520030_237525600_237525806_237527376_237527517_237540347_237540534_237540801_237540958_237542566_237542660_237545456_237545646_237546605_237546684_237549220_237549279_237552336_237552438_237553565
transcript_12407.known	chr1	-	4097	20	FSM	ENSG00000009307.17	ENST00000358528.9	4097	20	0	0	0	0	multi-exon	FALSE	canonical	2	593	junction_15	817.583104622392	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTAGCGCTTTCATTAT	-114716275	True	NA	-3	True	AATAAA	-25	NA	114757984	114716915	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737470_114737564_114737962_114738073_114739691_114739891_114749820_114750208_114757924
transcript_124073.known	chr2	+	2332	15	FSM	ENSG00000115648.14	ENST00000338530.8	2332	15	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	6.60859057498307	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATATGTGTATTCTTGAT	237486734	True	NA	21	True	AAAAAG	-21	NA	237487250	237553994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_237487438_237493402_237493537_237510573_237510796_237510988_237511102_237518538_237518649_237519909_237520030_237525600_237525806_237527376_237527517_237540347_237540534_237540801_237540958_237542566_237542660_237546605_237546684_237549220_237549279_237552336_237552438_237553565
transcript_12408.known	chr1	-	3774	20	FSM	ENSG00000009307.17	ENST00000369530.5	3774	20	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_17	993.441071948862	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAGTTGTGCCTGAAA	-114716294	True	NA	24	True	TTTAAA	-18	NA	114758003	114717311	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737962_114738073_114739691_114739891_114741526_114741674_114749820_114750208_114757924
transcript_124080.nic	chr2	+	2221	14	NIC	ENSG00000115648.14	novel	2332	15	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_5	8.73407257060754	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATATGTGTATTCTTGAT	237486725	True	NA	21	True	AAAAAG	-21	NA	237487241	237553994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_237487438_237493402_237493537_237510573_237510796_237510988_237511102_237518538_237518649_237525600_237525806_237527376_237527517_237540347_237540534_237540801_237540958_237542566_237542660_237546605_237546684_237549220_237549279_237552336_237552438_237553565
transcript_124081.known	chr2	+	2031	13	FSM	ENSG00000115648.14	ENST00000409373.5	2031	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	10.5751280528102	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATATGTGTATTCTTGAT	237486759	True	NA	21	True	AAAAAG	-21	NA	237487275	237553994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_237487438_237493402_237493537_237510573_237510796_237510988_237511102_237518538_237518649_237525600_237525806_237527376_237527517_237540347_237540534_237542566_237542660_237546605_237546684_237549220_237549279_237552336_237552438_237553565
transcript_124084.known	chr2	-	1077	5	FSM	ENSG00000124839.13	ENST00000409822.1	1077	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	308.586596436073	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGCAGCCTCTGGACAG	-237590750	False	NA	NA	False	NA	NA	NA	237590780	237574737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_237575129_237575386_237575481_237577256_237577383_237578003_237578156_237590466
transcript_124094.known	chr2	-	1603	6	FSM	ENSG00000124839.13	ENST00000264601.8	1603	6	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_4	148.769082809568	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTTTTAGAAGTTTTT	-237585940	True	NA	-7	True	ATTAAA	-14	NA	237590734	237574325	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_237575129_237575386_237575481_237577256_237577383_237578003_237578156_237585997_237586158_237590466
transcript_124095.known	chr2	-	1792	5	FSM	ENSG00000124839.13	ENST00000392001.6	1792	5	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_3	289.626807288276	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTAGAAGTTTTTGAGG	-237591055	False	NA	-3	True	ATTAAA	-18	NA	237591071	237574321	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_237575129_237575386_237575481_237577256_237577383_237585997_237586158_237590466
transcript_124096.known	chr2	-	1511	6	FSM	ENSG00000124839.13	ENST00000414278.1	1511	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	293.147062069535	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTCCAAAAATTAAATTGC	-237585921	True	NA	-36	True	NA	NA	NA	237590715	237574354	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_237575129_237575386_237575481_237577256_237577383_237578003_237578156_237586041_237586158_237590466
transcript_124097.known	chr2	+	1301	3	FSM	ENSG00000234949.2	ENST00000452801.1	1301	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	4	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGGCCGGGTGCAGTGG	237591017	True	NA	NA	False	AATAAA	-16	NA	237591168	237595981	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_237591268_237591871_237592032_237594939
transcript_124104.nic	chr2	+	2145	13	NIC	ENSG00000124831.19	novel	4092	24	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	265	junction_1	178.562372389407	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTGGTTCTAATTTTT	237623497	True	NA	21	True	ATTAAA	-23	NA	237627569	237780315	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_237627741_237708543_237708631_237748363_237748400_237749198_237749325_237751199_237751272_237753308_237753480_237756094_237756188_237760063_237760206_237769942_237769993_237772080_237772199_237772865_237772946_237774357_237774463_237779421
transcript_124108.nic	chr2	+	2415	13	NIC	ENSG00000124831.19	novel	3365	11	NA	NA	-64	0	combination_of_known_junctions	FALSE	canonical	3	349	junction_4	157.148284538309	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTGGTTCTAATTTTT	237692035	False	NA	21	True	ATTAAA	-23	NA	237692080	237780315	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_237692522_237708543_237708631_237748363_237748400_237749198_237749325_237751199_237751272_237753308_237753480_237756094_237756188_237760063_237760206_237769942_237769993_237772080_237772199_237772865_237772946_237774357_237774463_237779421
transcript_124111.nic	chr2	+	2224	12	NIC	ENSG00000124831.19	novel	4092	24	NA	NA	-168	0	combination_of_known_junctions	FALSE	canonical	3	265	junction_1	159.195965312884	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTGGTTCTAATTTTT	NA	False	NA	21	True	ATTAAA	-23	NA	237627418	237780315	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_237627741_237708543_237708631_237748363_237748400_237749198_237749325_237753308_237753480_237756094_237756188_237760063_237760206_237769942_237769993_237772080_237772199_237772865_237772946_237774357_237774463_237779421
transcript_124114.nic	chr2	+	2343	12	NIC	ENSG00000124831.19	novel	3365	11	NA	NA	-64	0	combination_of_known_junctions	FALSE	canonical	3	472	junction_1	127.001138798825	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTGGTTCTAATTTTT	237692035	False	NA	21	True	ATTAAA	-23	NA	237692080	237780315	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_237692522_237708543_237708631_237748363_237748400_237749198_237749325_237753308_237753480_237756094_237756188_237760063_237760206_237769942_237769993_237772080_237772199_237772865_237772946_237774357_237774463_237779421
transcript_124127.nic	chr2	+	1683	8	NIC	ENSG00000124831.19	novel	4092	24	NA	NA	-23	-1508	combination_of_known_junctions	FALSE	canonical	3	265	junction_1	226.672108778207	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCAGTACCCGTAGAAAC	237623491	True	NA	NA	False	AAAAAG	-19	NA	237627563	237763453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_237627741_237708543_237708631_237748363_237748400_237749198_237749325_237753308_237753480_237756094_237756188_237760063_237760206_237762602
transcript_124130.known	chr2	+	3709	8	FSM	ENSG00000124831.19	ENST00000289175.10	3709	8	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_7	191.495617256822	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACACACACACACAACACAA	237688775	True	NA	NA	False	NA	NA	NA	237692144	237765279	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_237692522_237708543_237708631_237748363_237748400_237749198_237749325_237753308_237753480_237756094_237756188_237760063_237760206_237762602
transcript_124139.nic	chr2	+	814	6	NIC	ENSG00000124831.19	novel	4092	24	NA	NA	-168	-2696	combination_of_known_junctions	FALSE	canonical	3	265	junction_1	232.637400260577	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGCATTAGTATGATACA	NA	False	NA	NA	False	AAAACA	-3	NA	237627418	237753479	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_237627741_237708543_237708631_237748363_237748400_237749198_237749325_237751199_237751272_237753308
transcript_124141.nic	chr2	+	933	6	NIC	ENSG00000124831.19	novel	3365	11	NA	NA	-64	-2696	combination_of_known_junctions	FALSE	canonical	3	349	junction_4	201.471189007262	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGCATTAGTATGATACA	237692035	False	NA	NA	False	AAAACA	-3	NA	237692080	237753479	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_237692522_237708543_237708631_237748363_237748400_237749198_237749325_237751199_237751272_237753308
transcript_124143.known	chr2	+	2869	6	FSM	ENSG00000124831.19	ENST00000478958.5	2869	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	213.554114921722	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTGGTTCTAATTTTT	237768173	False	NA	21	True	ATTAAA	-23	NA	237768196	237780315	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_237769819_237769942_237769993_237772080_237772199_237772865_237772946_237774357_237774463_237779421
transcript_124144.nic	chr2	+	601	5	NIC	ENSG00000124831.19	novel	4092	24	NA	NA	-27	-2696	combination_of_known_junctions	FALSE	canonical	3	265	junction_1	220.319086780969	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGCATTAGTATGATACA	237623487	True	NA	NA	False	AAAACA	-3	NA	237627559	237753479	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_237627741_237708543_237708631_237748363_237748400_237749198_237749325_237753308
transcript_124145.nic	chr2	+	861	5	ISM	ENSG00000124831.19	ENST00000289175.10	3709	8	-64	11800	-64	-2696	5prime_fragment	FALSE	canonical	3	472	junction_1	149.732052346851	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGCATTAGTATGATACA	237692035	False	NA	NA	False	AAAACA	-3	NA	237692080	237753479	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_237692522_237708543_237708631_237748363_237748400_237749198_237749325_237753308
transcript_124148.known	chr2	+	857	3	FSM	ENSG00000132329.11	ENST00000404910.6	857	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGACTTACCTCTGGAAAG	237858879	True	NA	-92	True	NA	NA	NA	237858892	237912010	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_237859128_237877223_237877363_237911527
transcript_124149.known	chr2	+	823	3	FSM	ENSG00000132329.11	ENST00000254661.5	823	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGAAAGACTCATTATCT	237859585	True	NA	4	True	ATTAAA	-16	NA	237859622	237912106	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_237859728_237877223_237877363_237911527
transcript_124162.known	chr2	+	2137	10	FSM	ENSG00000184182.19	ENST00000272930.9	2137	10	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_5	26.5873821368124	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGAGGGTGGCCCCTGG	237962165	True	NA	NA	False	NA	NA	NA	237967013	238042782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_237967133_237973091_237973226_237987962_237987993_237994743_237994810_238016565_238016634_238025341_238025413_238030555_238030614_238032221_238032255_238035877_238035941_238041287
transcript_124168.known	chr2	+	837	9	FSM	ENSG00000184182.19	ENST00000409633.5	837	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	138.4304879714	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGGCTTCTGAAGAGTT	237962165	True	NA	11	True	CATAAA	-17	NA	237967013	238041545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_237967133_237973091_237973226_237987962_237987993_237994743_237994810_238016565_238016634_238025341_238025413_238030555_238030614_238032221_238032255_238041287
transcript_124170.known	chr2	+	760	9	FSM	ENSG00000184182.19	ENST00000455999.5	760	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	138.481722620713	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGACCATCTTCATGACTG	237962169	True	NA	-54	True	NA	NA	NA	237967017	238041480	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_237967133_237973091_237973226_237987962_237987993_237994743_237994810_238016565_238016634_238030555_238030614_238032221_238032255_238035877_238035941_238041287
transcript_124173.known	chr2	+	1242	9	FSM	ENSG00000184182.19	ENST00000441728.6	1242	9	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	130.796597815081	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTTAATGTAAGTATAT	237966919	False	NA	-44	True	NA	NA	NA	237966944	238041886	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_237967133_237973091_237973226_237987962_237987993_237994743_237994810_238025341_238025413_238030555_238030614_238032221_238032255_238035877_238035941_238041287
transcript_124178.known	chr2	+	1138	9	FSM	ENSG00000184182.19	ENST00000409332.5	1138	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	139.181929053308	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAATTTGTACAATTCA	237962233	True	NA	-13	True	NA	NA	NA	237967081	238041917	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_237967133_237973091_237973226_237987962_237987993_238016565_238016634_238025341_238025413_238030555_238030614_238032221_238032255_238035877_238035941_238041287
transcript_124181.known	chr2	+	924	9	FSM	ENSG00000184182.19	ENST00000409953.5	924	9	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	136.705374345707	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTGGATGCAAAATCTCT	237962232	True	NA	7	True	NA	NA	NA	237967080	238041770	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_237967133_237987962_237987993_237994743_237994810_238016565_238016634_238025341_238025413_238030555_238030614_238032221_238032255_238035877_238035941_238041287
transcript_124183.known	chr2	+	803	8	FSM	ENSG00000184182.19	ENST00000433241.5	803	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_6	141.790302192775	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATAGGCTGTTGGTGAAA	237962231	True	NA	10	True	NA	NA	NA	237967079	238041605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_237967133_237973091_237973226_237987962_237987993_237994743_237994810_238016565_238016634_238025341_238025413_238035877_238035941_238041287
transcript_124186.known	chr2	+	552	8	FSM	ENSG00000184182.19	ENST00000416292.5	552	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	140.584929665237	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCGGAATAAAGTGGATGA	237962165	True	NA	NA	False	NA	NA	NA	237967013	238041293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_237967133_237973091_237973226_238016565_238016634_238025341_238025413_238030555_238030614_238032221_238032255_238035877_238035941_238041287
transcript_124189.known	chr2	+	831	8	FSM	ENSG00000184182.19	ENST00000445676.5	831	8	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	184.553847017556	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTTCTGCACAAGCGAT	237962179	True	NA	2	True	NA	NA	NA	237967027	238041692	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_237967133_237987962_237987993_237994743_237994810_238025341_238025413_238030555_238030614_238032221_238032255_238035877_238035941_238041287
transcript_124198.nic	chr2	+	2506	13	NIC	ENSG00000132330.18	novel	2450	12	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_5	135.288785771606	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGGATCCTGTGGTTTC	238055537	True	NA	11	True	AATAAA	-17	NA	238061009	238099413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296_238069478_238073782_238073848_238081708_238081837_238082044_238082210_238083247_238083355_238091217_238091255_238093860_238093945_238094419_238094523_238096800_238096877_238098201
transcript_124202.known	chr2	+	2450	12	FSM	ENSG00000132330.18	ENST00000254663.12	2450	12	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_9	71.2726113171598	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGGATCCTGTGGTTTC	238055528	True	NA	11	True	AATAAA	-17	NA	238061000	238099413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296_238069478_238081708_238081837_238082044_238082210_238083247_238083355_238091217_238091255_238093860_238093945_238094419_238094523_238096800_238096877_238098201
transcript_124214.nic	chr2	+	1540	10	ISM	ENSG00000132330.18	ENST00000651534.1	2526	12	26	4563	-16	0	5prime_fragment	FALSE	canonical	3	237	junction_9	63.3721128838074	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTGGCAGTTTTAATT	238060933	False	NA	6	True	ATTAAA	-18	NA	238060949	238094849	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296_238069478_238081708_238081837_238082044_238082210_238083247_238083355_238091217_238091255_238093860_238093945_238094419
transcript_124218.nic	chr2	+	2219	10	NIC	ENSG00000132330.18	novel	2450	12	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_2	120.938715221827	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGGATCCTGTGGTTTC	238060933	False	NA	11	True	AATAAA	-17	NA	238060949	238099413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_238061144_238064356_238064470_238081708_238081837_238082044_238082210_238083247_238083355_238091217_238091255_238093860_238093945_238094419_238094523_238096800_238096877_238098201
transcript_124219.known	chr2	+	5668	11	FSM	ENSG00000132330.18	ENST00000480357.5	5668	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	146.910891359354	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGGGATCCTGTGGTTT	238060911	False	NA	10	True	AATAAA	-16	NA	238060927	238099412	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296_238069478_238073782_238073848_238081708_238081837_238082044_238082210_238083247_238083355_238091217_238094523_238096800_238096877_238098201
transcript_124221.known	chr2	+	1774	8	FSM	ENSG00000132330.18	ENST00000409736.6	1774	8	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_4	28.8663351695786	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGAGTGTGTGTTTGTTT	238055558	True	NA	36	True	NA	NA	NA	238061030	238092083	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296_238069478_238081708_238081837_238082044_238082210_238083247_238083355_238091217
transcript_124227.nic	chr2	+	1652	7	NIC	ENSG00000132330.18	novel	1774	8	NA	NA	2	-24	combination_of_known_junctions	FALSE	canonical	3	48	junction_6	133.973152368508	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGTGGCTACATTTACT	238055549	True	NA	12	True	NA	NA	NA	238061021	238092059	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296_238069478_238081708_238081837_238082044_238082210_238091217
transcript_124236.known	chr2	+	807	4	FSM	ENSG00000132330.18	ENST00000416757.1	807	4	0	0	0	0	multi-exon	FALSE	canonical	3	383	junction_3	14.7044966667418	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTACGCCTGCAAATAGGC	238055618	True	NA	NA	False	AATAAA	-16	NA	238061090	238069836	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296
transcript_124238.known	chr2	+	458	3	FSM	ENSG00000132330.18	ENST00000497256.5	458	3	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_2	2	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTTTGCTACATTTTCA	238055493	True	NA	4	True	AATAAA	-17	NA	238060965	238068231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_238061144_238064356_238064470_238068064
transcript_124240.known	chr2	+	3448	2	FSM	ENSG00000144488.15	ENST00000477241.1	3448	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGCACCCCCTCTCTTGCA	238128900	True	NA	1	True	AATAAA	-14	NA	238128947	238133281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_238129242_238130127
transcript_124241.known	chr2	+	3610	4	FSM	ENSG00000144488.15	ENST00000409506.1	3610	4	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTCTCTTGCACTTGTT	238127348	True	NA	7	True	AATAAA	-20	NA	238127389	238133287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_238127529_238127621_238127735_238128706_238128905_238130127
transcript_124243.known	chr2	+	2939	8	FSM	ENSG00000178752.16	ENST00000546354.6	2939	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	2.2314999074019	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTATATAACTGACTT	238158731	True	NA	NA	False	AATAAA	-16	NA	238158969	238168890	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_238159206_238161593_238161717_238162735_238162839_238163736_238164000_238164074_238164184_238164269_238164361_238165605_238165685_238166955
transcript_124248.known	chr2	-	1455	12	FSM	ENSG00000132323.9	ENST00000254654.8	1455	12	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_8	21.1202773585595	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTTGAGTTATTATACT	-238200002	True	NA	-3	True	AATAAA	-22	NA	238203695	238170401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_238170677_238170942_238171025_238173533_238173654_238182064_238182187_238183652_238183741_238184019_238184114_238185180_238185288_238188130_238188258_238189852_238189973_238194274_238194332_238194804_238194871_238203498
transcript_124249.known	chr2	-	1861	11	FSM	ENSG00000132323.9	ENST00000463129.5	1861	11	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_8	54.0822521720388	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTTGAGTTATTATACT	-238199945	True	NA	-3	True	AATAAA	-22	NA	238203638	238170401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_238170677_238170942_238171025_238173533_238173654_238182064_238182187_238183652_238183741_238184019_238184114_238185180_238185288_238188130_238188258_238189862_238189973_238194274_238194871_238203498
transcript_124269.nic	chr2	-	1906	4	NIC	ENSG00000144485.11	novel	1368	4	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	187.394414715772	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGTTGAGTGATGTGTC	-238240610	True	NA	-3	True	AATAAA	-27	NA	238240671	238238266	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_238239157_238239486_238239569_238239660_238239748_238239824
transcript_124270.known	chr2	-	1286	4	FSM	ENSG00000144485.11	ENST00000409002.7	1286	4	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_2	162.239192415259	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTTGAAGTATTGTTGAG	-238238059	True	NA	-12	True	AATAAA	-18	NA	238239971	238238275	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_238239252_238239486_238239563_238239660_238239748_238239824
transcript_124271.known	chr2	-	738	4	FSM	ENSG00000144485.11	ENST00000409574.1	738	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	185.037533730022	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATTGCCCGGAGTGTCTG	-238238129	True	NA	NA	False	NA	NA	NA	238240041	238238859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_238239252_238239526_238239569_238239660_238239748_238239824
transcript_124273.known	chr2	-	1888	3	FSM	ENSG00000186235.12	ENST00000470346.3	1988	3	93	7	-28	-4	multi-exon	FALSE	canonical	1	2	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGTCTTCAATTTATTC	-238231596	False	NA	NA	False	AATAAA	-10	NA	238231613	238225119	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_238226613_238227683_238227799_238231333
transcript_124275.known	chr2	-	863	3	FSM	ENSG00000144485.11	ENST00000409182.1	863	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	104	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGGGAGGGAGCTACGGG	-238238046	True	NA	NA	False	AAGAAA	-31	NA	238239958	238238604	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_238239252_238239486_238239569_238239824
transcript_124276.known	chr2	-	1600	3	FSM	ENSG00000144485.11	ENST00000409160.7	1600	3	0	0	0	0	multi-exon	FALSE	canonical	3	408	junction_1	2.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTATTGTTGAGTGATGT	-238238126	True	NA	-6	True	AATAAA	-24	NA	238240038	238238269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_238239569_238239660_238239748_238239824
transcript_124277.known	chr2	-	598	2	FSM	ENSG00000186235.12	ENST00000466075.1	598	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGCTTTGTTAAAGGGCC	-238231660	False	1912	NA	False	NA	NA	NA	238231677	238227544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_238227799_238231333
transcript_124278.known	chr2	+	4003	15	FSM	ENSG00000204104.12	ENST00000391993.7	4003	15	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_3	16.7008493001685	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGTCAAATTGTATCATA	NA	False	NA	3	True	AGTAAA	-16	NA	238320440	238400822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_238320786_238325305_238325375_238325808_238325971_238328685_238328830_238328925_238329343_238332823_238332896_238333959_238334036_238347454_238347476_238348763_238348849_238349324_238349409_238352826_238352951_238353172_238353210_238356003_238356081_238397458_238397680_238398753
transcript_124283.known	chr2	+	1070	5	FSM	ENSG00000204104.12	ENST00000409739.2	1070	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	40.8312074276527	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGTCTTGCTGAGAACC	238318958	True	NA	NA	False	AAAAAG	-1	NA	238320535	238329342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_238320814_238325305_238325375_238325808_238325971_238328685_238328830_238328925
transcript_124288.known	chr2	+	6891	5	FSM	ENSG00000065802.12	ENST00000264607.9	6891	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	54.3369119475886	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTGTGTGTTCTGCCTC	238423167	True	NA	17	True	AATAAA	-24	NA	238426926	238452250	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_238427120_238433553_238433696_238435710_238436014_238444341_238444728_238446383
transcript_124290.known	chr2	+	878	4	FSM	ENSG00000065802.12	ENST00000409297.1	878	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	40.8765077873451	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGAAGATGTCCTCGTAG	238423244	True	NA	-84	True	NA	NA	NA	238427003	238446617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_238427120_238433553_238433696_238444341_238444728_238446383
transcript_124293.known	chr2	+	1342	2	FSM	ENSG00000233608.4	ENST00000612363.2	1342	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGGTCTCCCCATCTCT	238847526	True	NA	3	True	AATAAA	-13	NA	238848084	238910534	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_238848734_238909841
transcript_124298.known	chr2	-	8461	27	FSM	ENSG00000068024.18	ENST00000543185.6	8461	27	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_26	12.5013608726666	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGGTTTCTGCCCGTGC	-239398642	True	NA	0	True	AATAAA	-23	NA	239401020	239048167	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_239053137_239053459_239053602_239054748_239054834_239066721_239066856_239068488_239068608_239081094_239081193_239082101_239082222_239084154_239084243_239087558_239087615_239090008_239090117_239095009_239095057_239102775_239102897_239108049_239108184_239111525_239111713_239115052_239115311_239126455_239126695_239134244_239134444_239134526_239134644_239139683_239139797_239144582_239144715_239156651_239156774_239163802_239163924_239176412_239176564_239189832_239190078_239236592_239236665_239352677_239352919_239400977
transcript_12430.known	chr1	-	2667	19	FSM	ENSG00000009307.17	ENST00000534699.5	2667	19	0	0	0	0	multi-exon	FALSE	canonical	2	117	junction_18	1034.68266143613	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAACTTAAGGTGGCGCC	-114716273	True	NA	-9	True	AATAAA	-45	NA	114757982	114717956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737470_114737564_114737962_114738073_114739691_114739891_114757924
transcript_124308.nic	chr2	-	3637	17	ISM	ENSG00000068024.18	ENST00000543185.6	8461	27	-16	45763	-16	643	5prime_fragment	FALSE	canonical	3	20	junction_16	12.5492778676703	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCCCTCCTAGAGTTAT	-239398658	True	NA	NA	False	AATAAA	-22	NA	239401036	239093930	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_239095057_239102775_239102897_239108049_239108184_239111525_239111713_239115052_239115311_239126455_239126695_239134244_239134444_239134526_239134644_239139683_239139797_239144582_239144715_239156651_239156774_239163802_239163924_239176412_239176564_239189832_239190078_239236592_239236665_239352677_239352919_239400977
transcript_124310.known	chr2	-	4855	10	FSM	ENSG00000130414.13	ENST00000252711.7	4855	10	0	0	0	0	multi-exon	FALSE	canonical	3	830	junction_5	80.7961923072989	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATACCTGGTGATTATATT	-240015143	True	NA	-2	True	AATAAA	-17	NA	240025342	239957371	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_239961187_239990073_239990183_240005209_240005296_240007315_240007371_240011616_240011697_240014738_240014861_240018552_240018640_240021196_240021413_240022171_240022341_240025226
transcript_124311.known	chr2	-	1580	10	FSM	ENSG00000130414.13	ENST00000444548.6	1580	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	297.775082906545	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTTGTAATGTCTTTGT	-240015141	True	NA	-8	True	NA	NA	NA	240025340	239969220	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_239969763_239990073_239990183_240005209_240005296_240007315_240007371_240011616_240011697_240014738_240014861_240018552_240018640_240021196_240021413_240022171_240022341_240025226
transcript_124312.known	chr2	-	2509	10	FSM	ENSG00000130414.13	ENST00000448880.6	2509	10	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	299.289075339017	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAATATACACATATTTAT	-240015190	True	NA	NA	False	AATAAA	-12	NA	240025389	239972239	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_239973662_239990073_239990183_240005209_240005296_240007315_240007371_240011616_240011697_240014738_240014861_240018552_240018640_240021196_240021413_240022171_240022341_240025226
transcript_124316.known	chr2	-	4509	9	FSM	ENSG00000130414.13	ENST00000485344.6	4509	9	0	0	0	0	multi-exon	FALSE	canonical	3	839	junction_2	79.0014833721494	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCCCCATCGTACGTCT	-240015124	True	NA	-19	True	AATAAA	-15	NA	240025323	239960740	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_239961187_239990073_239990183_240005209_240005296_240007315_240007371_240011616_240014861_240018552_240018640_240021196_240021413_240022171_240022341_240025226
transcript_124317.known	chr2	-	1332	9	FSM	ENSG00000130414.13	ENST00000679158.1	1332	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	314.487653771972	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTGTGGTTTCAGCGCT	-240015190	True	NA	-111	True	AAAACA	-32	NA	240025389	239960832	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_239961187_240005209_240005296_240007315_240007371_240011616_240011697_240014738_240014861_240018552_240018640_240021196_240021413_240022171_240022341_240025226
transcript_124319.nic	chr2	-	2233	5	ISM	ENSG00000130414.13	ENST00000678737.1	1818	9	0	23920	0	5144	5prime_fragment	FALSE	canonical	3	908	junction_1	61.936963923008	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTCTGTGTTCTTATTTT	-240015190	True	NA	-2	True	TATAAA	-18	NA	240025389	240013262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_240014861_240018552_240018640_240021196_240021413_240022171_240022341_240025226
transcript_124320.known	chr2	-	640	3	FSM	ENSG00000172428.11	ENST00000489698.1	640	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	954	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGGAGTGATCTCTTTC	-240136165	False	NA	-24	True	ATTAAA	-15	NA	240136176	240130827	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_240131089_240133932_240134006_240135870
transcript_124321.known	chr2	-	418	3	FSM	ENSG00000172428.11	ENST00000607357.2	418	3	0	0	0	0	multi-exon	FALSE	canonical	3	1691	junction_2	125.5	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGGAGTGATCTCTTTC	-240122613	True	NA	-24	True	ATTAAA	-15	NA	240136305	240130827	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_240131089_240133932_240134006_240136221
transcript_124324.nic	chr2	+	3868	10	NIC	ENSG00000063660.9	novel	3719	9	NA	NA	-227	-2	combination_of_known_junctions	FALSE	canonical	2	8	junction_9	67.962044599709	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGCAGGGCGAGGCCTCG	240435173	False	NA	12	True	AATAAA	-13	NA	240435435	240468074	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_240436085_240459029_240459189_240462190_240462583_240463346_240463513_240464615_240464747_240464855_240464976_240465076_240465211_240465472_240465649_240466057_240466370_240466445
transcript_124332.known	chr2	+	3719	9	FSM	ENSG00000063660.9	ENST00000264039.7	3719	9	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_8	21.802737786801	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGGCGAGGCCTCGGG	240433657	True	NA	14	True	AATAAA	-15	NA	240435662	240468076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_240436085_240459029_240459189_240462190_240462583_240463346_240463513_240464615_240464747_240464855_240464976_240465076_240465211_240465472_240465649_240466057
transcript_124337.known	chr2	+	1835	9	FSM	ENSG00000063660.9	ENST00000420138.5	1835	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	73.6185268801271	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGCCAAAAATACAACACAGA	240452706	True	NA	-21	True	NA	NA	NA	240452810	240466330	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_240453095_240459029_240459189_240462190_240462583_240463346_240463513_240464615_240464747_240464855_240464976_240465076_240465211_240465472_240465649_240466057
transcript_12434.known	chr1	-	4006	19	FSM	ENSG00000009307.17	ENST00000339438.10	4006	19	0	0	0	0	multi-exon	FALSE	canonical	2	2104	junction_7	396.732553662795	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGCGCTTTCATTATTGA	-114716274	True	NA	0	True	AATAAA	-28	NA	114757983	114716912	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737962_114738073_114739691_114739891_114749820_114750208_114757924
transcript_124346.known	chr2	+	5761	11	FSM	ENSG00000142327.13	ENST00000270357.10	5761	11	0	0	0	0	multi-exon	TRUE	canonical	3	50	junction_3	8.88819441731559	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAACAGTGCTCTGGTTTG	240567487	True	NA	NA	False	AATAAA	-14	NA	240568483	240581372	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_240569115_240572422_240572564_240573109_240573262_240573774_240573892_240574112_240574349_240574514_240574629_240575029_240575143_240575501_240575611_240576534_240576766_240576847_240576991_240577598
transcript_124352.known	chr2	-	1569	6	FSM	ENSG00000144504.16	ENST00000496300.5	1569	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	6.05309838016862	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGACCCACGTCTCTTCCC	-240560751	False	232	NA	False	NA	NA	NA	240560768	240523822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_240524382_240525684_240525850_240529036_240529510_240552913_240553058_240554865_240555056_240560730
transcript_124353.nic	chr2	-	3214	6	ISM	ENSG00000144504.16	ENST00000405523.7	1827	8	33	2183	0	0	5prime_fragment	FALSE	canonical	1	1	junction_5	5.85149553533112	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGGTCCGCATCACCT	-240557756	False	232	-1	True	AATAAA	-16	NA	240557988	240521937	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_240524382_240525684_240525850_240552913_240553058_240554865_240555056_240557189_240557353_240557880
transcript_124355.known	chr2	-	3304	5	FSM	ENSG00000144504.16	ENST00000405002.5	3304	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	5.54526825320471	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGGTCCGCATCACCT	-240560859	True	NA	-1	True	AATAAA	-16	NA	240561091	240521937	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_240524382_240525684_240525850_240552913_240553058_240554865_240555056_240560730
transcript_124360.known	chr2	+	817	3	FSM	ENSG00000188542.10	ENST00000438823.1	817	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	8.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCAGCTTTGGTAAACTG	240560739	False	NA	10	True	AATAAA	-18	NA	240560791	240564014	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_240561078_240561329_240561520_240563673
transcript_124364.known	chr2	-	2969	3	FSM	ENSG00000144504.16	ENST00000484526.5	2969	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	3	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTTGGTCCGCATCACC	-240560859	True	NA	-2	True	AATAAA	-15	NA	240561091	240521938	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_240524382_240525684_240525850_240560730
transcript_124365.known	chr2	+	4648	2	FSM	ENSG00000188542.10	ENST00000405954.2	4648	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCTTTTCCAATACTCG	240560298	True	NA	NA	False	AGTAAA	-20	NA	240560356	240565256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_240561078_240561329
transcript_124368.known	chr2	-	4000	1	FSM	ENSG00000260942.1	ENST00000567819.1	4000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCCTCCGCTGTTAACAG	-240586680	False	NA	46	True	NA	NA	NA	240586699	240582699	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_240582700_240586700
transcript_124371.nic	chr2	+	2846	13	NIC	ENSG00000142330.20	novel	2514	13	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	73.0363303812257	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCAGTCTTGCTCCAGGTA	240584685	True	NA	13	True	AATAAA	-22	NA	240586727	240599104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_240587053_240589342_240589475_240590814_240591012_240591932_240592151_240593905_240594048_240594542_240594710_240595023_240595305_240595933_240596153_240596318_240596522_240596680_240596943_240597887_240598088_240598351_240598398_240598650
transcript_124373.known	chr2	+	2514	13	FSM	ENSG00000142330.20	ENST00000416591.5	2514	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	80.5377758156589	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGCGCTGATGATTTGCA	240584828	False	NA	-7	True	AATAAA	-2	NA	240586870	240599084	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_240587053_240589342_240589475_240590814_240591012_240591932_240592151_240593905_240594048_240594542_240594710_240595023_240595305_240595933_240596153_240596318_240596522_240596849_240596943_240597887_240598088_240598351_240598398_240598650
transcript_124382.nic	chr2	+	3010	12	NIC	ENSG00000142330.20	novel	2621	12	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_9	65.8719017337175	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCAGTCTTGCTCCAGGTA	240584687	True	NA	13	True	AATAAA	-22	NA	240586729	240599104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_240587053_240589342_240589475_240590814_240591012_240591932_240592151_240593905_240594048_240594542_240594710_240595023_240595305_240595933_240596522_240596680_240596943_240597887_240598088_240598351_240598398_240598650
transcript_124385.known	chr2	+	2453	12	FSM	ENSG00000142330.20	ENST00000270361.15	2453	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	67.9426106880464	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGCGCTGATGATTTGCA	240584828	False	NA	-7	True	AATAAA	-2	NA	240586870	240599084	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_240587053_240589342_240589475_240590814_240591001_240591932_240592151_240593905_240594048_240594542_240594710_240595023_240595305_240596318_240596522_240596680_240596943_240597887_240598088_240598351_240598398_240598650
transcript_124386.known	chr2	+	2320	12	FSM	ENSG00000142330.20	ENST00000391983.7	2320	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	70.3446063061244	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGCTCCAGGTAGTTCC	240584828	False	NA	18	True	AATAAA	-27	NA	240586870	240599109	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_240587053_240589342_240589475_240590814_240591012_240591932_240592151_240593905_240594048_240594542_240594710_240595023_240595305_240596318_240596522_240596849_240596943_240597887_240598088_240598351_240598398_240598650
transcript_124396.known	chr2	+	2202	11	FSM	ENSG00000142330.20	ENST00000357048.8	2202	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_8	56.4574175817492	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGCGCTGATGATTTGCA	240584828	False	NA	-7	True	AATAAA	-2	NA	240586870	240599084	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_240587053_240589342_240589475_240590814_240591012_240591932_240592151_240593905_240594048_240594542_240594710_240595023_240595305_240596318_240596522_240597887_240598088_240598351_240598398_240598650
transcript_124406.known	chr2	+	1999	10	FSM	ENSG00000142330.20	ENST00000354082.8	1999	10	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_7	56.7900617283615	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGCGCTGATGATTTGCA	240584828	False	NA	-7	True	AATAAA	-2	NA	240586870	240599084	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_240587053_240589342_240589475_240590814_240591012_240591932_240592151_240593905_240594048_240594542_240594710_240595023_240595305_240597887_240598088_240598351_240598398_240598650
transcript_124407.nic	chr2	+	3377	10	NIC	ENSG00000142330.20	novel	2621	12	NA	NA	-4	0	intron_retention	FALSE	canonical	3	14	junction_7	57.3335486645396	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCAGTCTTGCTCCAGGTA	240584687	True	NA	13	True	AATAAA	-22	NA	240586729	240599104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_240587053_240589342_240589475_240590814_240591012_240591932_240592151_240593905_240594048_240594542_240594710_240595023_240596522_240597887_240598088_240598351_240598398_240598650
transcript_124419.known	chr2	+	787	2	FSM	ENSG00000142330.20	ENST00000463653.1	787	2	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCTGCCTCAGATCTCT	240584691	True	NA	NA	False	AATAAA	-43	NA	240586733	240589810	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_240587053_240589342
transcript_124421.known	chr2	-	5945	48	FSM	ENSG00000130294.18	ENST00000647731.1	5945	48	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_12	78.103099555994	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTCTGGTGGGAGGGAGA	-240818237	True	NA	NA	False	NA	NA	NA	240820211	240716668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_240717407_240718049_240718169_240719005_240719199_240719773_240719927_240720913_240721039_240721806_240721885_240722455_240722657_240723412_240723559_240723974_240724037_240725270_240725405_240726825_240726941_240734718_240734746_240737062_240737169_240740057_240740143_240740297_240740365_240741268_240741378_240742928_240742985_240743941_240744061_240745426_240745518_240745737_240745910_240746038_240746178_240747235_240747322_240750428_240750548_240758359_240758498_240760664_240760844_240761228_240761378_240762718_240762813_240763018_240763092_240763165_240763347_240765709_240765794_240766914_240767022_240767265_240767346_240769132_240769209_240769626_240769707_240770970_240771105_240773113_240773257_240774182_240774262_240775850_240775927_240782589_240782608_240783043_240783110_240783738_240783817_240784988_240785101_240786334_240786514_240787250_240787317_240788050_240788231_240789235_240789313_240797646_240797813_240820121
transcript_124422.known	chr2	-	5859	48	FSM	ENSG00000130294.18	ENST00000648129.1	5859	48	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_23	80.8168292582278	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTAACTATAAGACTTGT	-240820096	False	NA	-14	True	AATATA	-34	NA	240820212	240717004	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_240717407_240718049_240718169_240719005_240719199_240719773_240719927_240720913_240721039_240721806_240721885_240722455_240722657_240723412_240723559_240723974_240724037_240725270_240725405_240726825_240726941_240737062_240737169_240740057_240740143_240740297_240740365_240741268_240741378_240742928_240742985_240743941_240744061_240745426_240745518_240745737_240745910_240746038_240746178_240747235_240747322_240750428_240750548_240757318_240757595_240758359_240758498_240760664_240760844_240761228_240761378_240762718_240762813_240763018_240763092_240763165_240763347_240765709_240765794_240766914_240767022_240767265_240767346_240769132_240769209_240769626_240769707_240770970_240771105_240773113_240773257_240774182_240774262_240775850_240775927_240782589_240782608_240783043_240783110_240783738_240783817_240784988_240785101_240786334_240786514_240787250_240787317_240788050_240788231_240789235_240789313_240797646_240797813_240820121
transcript_124423.known	chr2	-	8987	47	FSM	ENSG00000130294.18	ENST00000649096.1	8987	47	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_29	61.4640880594757	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTCTGCTGTGGCTTTA	-240820256	False	NA	-3	True	AATAAA	-27	NA	240820372	240713760	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_240717407_240718049_240718169_240719005_240719199_240719773_240719927_240720913_240721039_240721806_240721885_240722455_240722657_240723412_240723559_240723974_240724037_240725270_240725405_240726825_240726941_240737062_240737169_240740057_240740143_240740297_240740365_240741268_240741378_240742928_240742985_240743941_240744061_240745426_240745518_240745737_240745910_240746038_240746178_240747235_240747322_240750428_240750548_240758359_240758498_240760664_240760844_240761228_240761378_240762718_240762813_240763018_240763092_240763165_240763347_240765709_240765794_240766914_240767022_240767265_240767346_240769132_240769209_240769626_240769707_240770970_240771105_240773113_240773257_240774182_240774262_240775850_240775927_240782589_240782608_240783043_240783110_240783738_240783817_240784988_240785101_240786334_240786514_240787250_240787317_240788050_240788231_240789235_240789313_240797646_240797813_240820121
transcript_124431.known	chr2	-	2430	11	FSM	ENSG00000130294.18	ENST00000650542.1	2430	11	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	21.9872690436989	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTGTAAAATGGCCCCAAA	-240820101	False	NA	NA	False	NA	NA	NA	240820217	240774534	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_240775927_240782589_240782608_240783043_240783110_240783738_240783817_240784988_240785101_240786334_240786514_240787250_240787317_240788050_240788231_240789235_240789313_240797646_240797813_240820121
transcript_124440.nic	chr2	-	1388	10	ISM	ENSG00000130294.18	ENST00000650542.1	2430	11	-350	8055	-195	5461	5prime_fragment	FALSE	canonical	3	204	junction_9	20.1482162308218	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCGGCTTCCTTCAGCC	-240820451	False	NA	NA	False	NA	NA	NA	240820567	240782589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_240782608_240783043_240783110_240783738_240783817_240784988_240785101_240786334_240786514_240787250_240787317_240788050_240788231_240789235_240789313_240797646_240797813_240820121
transcript_124452.nic	chr2	-	1463	9	ISM	ENSG00000130294.18	ENST00000650542.1	2430	11	-442	8508	286	5008	5prime_fragment	FALSE	canonical	3	204	junction_8	18.3469173159962	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGCCCGGCCCGGCTT	-240820543	False	NA	-10	True	NA	NA	NA	240820659	240783042	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_240783110_240783738_240783817_240784988_240785101_240786334_240786514_240787250_240787317_240788050_240788231_240789235_240789313_240797646_240797813_240820121
transcript_124470.known	chr2	-	1587	4	FSM	ENSG00000122085.17	ENST00000391980.7	1587	4	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_3	5.90668171555645	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGTTTTAGTACATCA	-241100397	True	NA	-19	True	AATAAA	-16	NA	241102287	241095570	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241096439_241097242_241097428_241099395_241099895_241102252
transcript_124471.known	chr2	-	802	3	FSM	ENSG00000122085.17	ENST00000406593.1	802	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	39	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTATAAGTCACCTG	-241100409	True	NA	NA	False	NA	NA	NA	241102299	241095868	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241096439_241097242_241097428_241102252
transcript_124473.known	chr2	-	4326	18	FSM	ENSG00000115687.14	ENST00000358649.8	4326	18	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	57.0329838398338	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCTGAAGGCATGAGTG	-241145749	True	NA	-22	True	ATTAAA	-17	NA	241149435	241106296	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241106724_241107352_241107500_241108166_241108301_241112239_241112440_241115021_241115178_241115287_241115414_241122731_241122900_241123948_241124134_241126195_241127452_241132873_241133031_241135870_241136040_241137003_241137265_241137952_241138088_241138653_241138795_241139884_241140056_241140520_241140754_241142836_241143075_241149413
transcript_124475.known	chr2	-	4540	18	FSM	ENSG00000115687.14	ENST00000234040.9	4540	18	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_17	41.1799998487525	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACTTGGATGTTGTGA	-241145786	True	NA	-8	True	ATTAAA	-24	NA	241149472	241106098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241106724_241107352_241107500_241108166_241108301_241112239_241112440_241115042_241115178_241115287_241115414_241122731_241122900_241123948_241124134_241126195_241127452_241132873_241133031_241135870_241136040_241137003_241137265_241137952_241138088_241138653_241138795_241139884_241140056_241140520_241140754_241142836_241143075_241149413
transcript_124480.known	chr2	+	1941	10	FSM	ENSG00000115685.15	ENST00000234038.11	1941	10	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_8	116.152305292195	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGAAGTCTGGATTTAATG	241147845	True	NA	8	True	TATAAA	-18	NA	241150466	241183652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241150548_241153475_241153605_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241169780_241169868_241182646
transcript_124482.known	chr2	+	959	9	FSM	ENSG00000115685.15	ENST00000423280.5	959	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	195.85960373441	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGCGGCAGATCGATGC	241149231	True	NA	NA	False	NA	NA	NA	241149612	241182784	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241149709_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241169780_241169868_241182646
transcript_124484.known	chr2	+	965	9	FSM	ENSG00000115685.15	ENST00000406106.7	965	9	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_8	98.8610135493259	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTACTTGTTTTTTTCTGT	241147858	True	NA	18	True	AATAAA	-19	NA	241150479	241167174	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241150548_241153475_241153605_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241167044
transcript_124485.nic	chr2	+	924	9	ISM	ENSG00000115685.15	ENST00000234038.11	1941	10	0	13796	0	0	5prime_fragment	FALSE	canonical	3	280	junction_8	97.3202670310763	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTCTGGGTAAGTTTA	241147845	True	NA	NA	False	AATAGA	-41	NA	241150466	241169856	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_241150548_241153475_241153605_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241169780
transcript_124488.known	chr2	+	1954	9	FSM	ENSG00000115685.15	ENST00000272983.12	1954	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	197.415765264581	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGATGCCGTTGCAAT	241149276	False	NA	-11	True	AATAAA	-40	NA	241149657	241182985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241150548_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241169780_241169868_241182646
transcript_124489.known	chr2	+	883	8	FSM	ENSG00000115685.15	ENST00000402734.5	883	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	202.710913089834	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTACTTGTTTTTTTCT	241149210	True	NA	16	True	AATAAA	-17	NA	241149591	241167172	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241149709_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241167044
transcript_124490.known	chr2	+	820	8	FSM	ENSG00000115685.15	ENST00000401987.5	820	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	204.506673709776	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTACTTGTTTTTTTCTGT	241147874	True	NA	18	True	AATAAA	-19	NA	241150495	241167174	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241150548_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241167044
transcript_124491.known	chr2	-	2024	4	FSM	ENSG00000115687.14	ENST00000472072.5	2024	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	109.693512418313	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAAGGCATGAGTGTT	-241109770	False	NA	-20	True	ATTAAA	-19	NA	241109780	241106294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241106724_241107352_241107500_241108166_241108301_241108466
transcript_124492.known	chr2	+	583	6	FSM	ENSG00000115685.15	ENST00000439916.5	583	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	217.373411437554	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAACTTAAGCAACTTAC	241147845	True	NA	NA	False	AATAAA	-12	NA	241150466	241160433	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241150548_241153475_241153605_241157806_241157863_241158465_241158550_241159212_241159344_241160331
transcript_124496.known	chr2	+	2196	2	FSM	ENSG00000146205.15	ENST00000487192.1	2196	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTCCTTGGAGTTCTA	241216615	True	NA	21	True	NA	NA	NA	241218184	241225184	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241218382_241223185
transcript_124526.known	chr2	-	6372	28	FSM	ENSG00000115677.18	ENST00000391975.5	6372	28	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_27	253.745571025023	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGCCGCCTGTGTGTTCT	-241267290	True	NA	-4	True	AATAAA	-41	NA	241272886	241227263	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241229688_241229832_241229962_241230152_241230270_241230758_241230945_241233819_241233964_241235120_241235256_241235489_241235595_241236614_241236770_241238648_241238788_241239601_241239821_241239900_241240123_241242459_241242679_241246751_241246884_241247055_241247143_241248002_241248117_241248243_241248349_241249840_241249981_241252956_241253036_241253392_241253498_241255050_241255159_241255373_241255581_241256183_241256400_241256599_241256807_241262710_241262927_241264447_241264606_241266793_241266907_241268476_241268542_241272760
transcript_124527.known	chr2	-	4489	28	FSM	ENSG00000115677.18	ENST00000391976.6	4489	28	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_27	228.763779783896	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTGCCCTCTTCCTTTCC	-241315256	False	NA	-11	True	AATAAA	-26	NA	241315292	241229211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241229688_241229832_241229962_241230152_241230270_241230758_241230945_241233819_241233964_241235120_241235256_241235489_241235595_241236614_241236770_241238648_241238788_241239601_241239821_241239900_241240123_241242459_241242679_241246751_241246884_241247055_241247143_241248002_241248117_241248243_241248349_241249840_241249981_241252956_241253036_241253392_241253498_241255050_241255159_241255373_241255581_241256183_241256400_241256599_241256807_241262710_241262927_241264447_241264606_241266793_241266907_241268476_241268542_241315101
transcript_124529.known	chr2	-	6322	28	FSM	ENSG00000115677.18	ENST00000310931.10	6322	28	0	0	0	0	multi-exon	FALSE	canonical	3	538	junction_27	209.416322570907	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGCATGCTGGGACTCAT	-241302653	True	NA	-31	True	AATAAA	-14	NA	241315672	241227290	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241229688_241229832_241229962_241230152_241230270_241230758_241230945_241233819_241233964_241235120_241235256_241235489_241235595_241236614_241236770_241238648_241238788_241239601_241239821_241239900_241240123_241242459_241242679_241246751_241246884_241247055_241247143_241248002_241248117_241248243_241248349_241249840_241249981_241252956_241253036_241253392_241253498_241255050_241255159_241255373_241255581_241256183_241256400_241256599_241256807_241262710_241262927_241264447_241264606_241266793_241266907_241268476_241268542_241315569
transcript_124593.known	chr2	+	3613	14	FSM	ENSG00000168385.18	ENST00000360051.7	3613	14	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	1454.36597951371	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTATTTCTCTTGGT	241312780	True	NA	NA	False	AATAAA	-20	NA	241315288	241354024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241315611_241317498_241317600_241324215_241324242_241325992_241326114_241335125_241335213_241335974_241336099_241337381_241337517_241337672_241337791_241342991_241343094_241343751_241343898_241346165_241346250_241348133_241348192_241350072_241350204_241351966
transcript_1246.known	chr1	-	2078	7	FSM	ENSG00000215790.8	ENST00000647043.1	2078	7	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_1	60.6071136272156	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTCTCCCTGCTTTGTTT	-1745868	False	NA	NA	False	AATAAA	-22	NA	1745919	1724837	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1725423_1734689_1734836_1738320_1738449_1738921_1739058_1739235_1739705_1744250_1744669_1745723
transcript_124608.nic	chr2	+	1937	14	NIC	ENSG00000168385.18	novel	1734	17	NA	NA	0	-75	combination_of_known_junctions	FALSE	canonical	3	372	junction_1	1387.55132321519	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATGAGATATATCTTTAT	241288594	True	NA	10	True	AATAAA	-16	NA	241315863	241352551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_241315983_241317498_241317600_241324215_241324242_241325992_241326114_241335125_241335213_241335974_241336099_241337381_241337517_241337672_241337791_241342991_241343094_241343751_241343898_241346165_241346250_241348133_241348192_241350072_241350204_241351966
transcript_124609.nic	chr2	+	3413	14	NIC	ENSG00000168385.18	novel	1734	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	372	junction_1	1387.55132321519	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTATTTCTCTTGGTTAT	241288594	True	NA	NA	False	AATAAA	-23	NA	241315863	241354027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_241315983_241317498_241317600_241324215_241324242_241325992_241326114_241335125_241335213_241335974_241336099_241337381_241337517_241337672_241337791_241342991_241343094_241343751_241343898_241346165_241346250_241348133_241348192_241350072_241350204_241351966
transcript_124610.known	chr2	+	3446	14	FSM	ENSG00000168385.18	ENST00000616972.4	3446	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1524.30486630588	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTATTTCTCTTGGT	241288591	True	NA	NA	False	AATAAA	-20	NA	241315860	241354024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241315983_241316421_241316556_241324215_241324242_241325992_241326114_241335125_241335213_241335974_241336099_241337381_241337517_241337672_241337791_241342991_241343094_241343751_241343898_241346165_241346250_241348133_241348192_241350072_241350204_241351966
transcript_124612.known	chr2	+	3333	14	FSM	ENSG00000168385.18	ENST00000402092.6	3333	14	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	1520.35177337118	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTATTTCTCTTGGTTAT	241288658	True	NA	NA	False	AATAAA	-23	NA	241315927	241354027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241315983_241320202_241320288_241324215_241324242_241325992_241326114_241335125_241335213_241335974_241336099_241337381_241337517_241337672_241337791_241342991_241343094_241343751_241343898_241346165_241346250_241348133_241348192_241350072_241350204_241351966
transcript_124625.known	chr2	+	3701	13	FSM	ENSG00000168385.18	ENST00000391973.6	3701	13	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	1128.88168297952	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTATTTCTCTTGGT	241315074	False	NA	NA	False	AATAAA	-20	NA	241315099	241354024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241315611_241324215_241324242_241325992_241326114_241335125_241335213_241335974_241336099_241337381_241337517_241337672_241337791_241342991_241343094_241343751_241343898_241346165_241346250_241348133_241348192_241350072_241350204_241351966
transcript_124635.known	chr2	+	3251	13	FSM	ENSG00000168385.18	ENST00000391971.7	3251	13	0	0	0	0	multi-exon	FALSE	canonical	3	3174	junction_1	349.882797836965	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTATTTCTCTTGGTTAT	241288655	True	NA	NA	False	AATAAA	-23	NA	241315924	241354027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241315983_241324215_241324242_241325992_241326114_241335125_241335213_241335974_241336099_241337381_241337517_241337672_241337791_241342991_241343094_241343751_241343898_241346165_241346250_241348133_241348192_241350072_241350204_241351966
transcript_12465.known	chr1	-	3228	18	FSM	ENSG00000009307.17	ENST00000261443.9	3228	18	0	0	0	0	multi-exon	FALSE	canonical	2	117	junction_17	789.970924960999	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAATCTTGTTTTTTTT	-114716265	True	NA	-23	True	AATAAA	-14	NA	114757974	114717294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737962_114738073_114739691_114739891_114757924
transcript_12466.known	chr1	-	3459	18	FSM	ENSG00000009307.17	ENST00000530886.5	3459	18	0	0	0	0	multi-exon	FALSE	canonical	2	115	junction_16	790.308021069058	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGCCTGAAATGAATCT	-114716318	True	NA	31	True	AATAAA	-4	NA	114758027	114717304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737962_114738073_114749820_114750208_114757924
transcript_124669.known	chr2	+	3267	12	FSM	ENSG00000168385.18	ENST00000407971.5	3267	12	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	1193.23719005717	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTATTTCTCTTGGTTAT	241288613	True	NA	NA	False	AATAAA	-23	NA	241315882	241354027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241315983_241325992_241326114_241335125_241335213_241335974_241336099_241337381_241337517_241337672_241337791_241342991_241343094_241343751_241343898_241346165_241346250_241348133_241348192_241350072_241350204_241351966
transcript_124709.nic	chr2	-	1166	7	ISM	ENSG00000115677.18	ENST00000310931.10	6322	28	-104	28909	44	183	5prime_fragment	FALSE	canonical	3	538	junction_6	231.785640912748	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTATGAGGAGAAGGTAC	-241315740	False	NA	-16	True	NA	NA	NA	241315776	241256199	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_-_241256400_241256599_241256807_241262710_241262927_241264447_241264606_241266793_241266907_241268476_241268542_241315569
transcript_124715.known	chr2	+	659	5	FSM	ENSG00000168385.18	ENST00000473479.5	659	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	1660.44602441633	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGAAACACCTGGATT	241288666	True	NA	NA	False	NA	NA	NA	241315935	241336336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241315983_241324215_241324242_241325992_241326114_241335125_241335213_241335958
transcript_124717.known	chr2	+	372	5	FSM	ENSG00000168385.18	ENST00000441533.5	372	5	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_1	1847.17595263689	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTAAAAACATTCTTATGT	241288674	True	NA	4	True	NA	NA	NA	241315943	241335210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241315983_241317498_241317600_241324215_241324242_241325992_241326114_241335125
transcript_124719.known	chr2	+	1163	5	FSM	ENSG00000168385.18	ENST00000461048.5	1163	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	173.841882180331	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTCATTTTCAGTATGC	241288624	True	NA	NA	False	AATAAA	-16	NA	241315893	241325244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241315983_241316429_241316541_241317498_241317600_241324215_241324242_241324408
transcript_124722.known	chr2	+	740	4	FSM	ENSG00000168385.18	ENST00000482304.5	740	4	0	0	0	0	multi-exon	FALSE	canonical	3	3174	junction_1	434.941630822139	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATGACTGTTGAATGAAA	241288594	True	NA	NA	False	NA	NA	NA	241315863	241335599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241315983_241324215_241324242_241325992_241326114_241335125
transcript_124736.known	chr2	+	4009	27	FSM	ENSG00000006607.14	ENST00000264042.8	4009	27	0	0	0	0	multi-exon	TRUE	canonical	2	12	junction_21	19.2799371454204	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCATTCTCCTCTGCCTG	241353172	True	NA	10	True	AATAAA	-18	NA	241356284	241494841	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241356389_241373083_241373291_241403827_241403933_241404798_241404842_241407536_241407616_241411032_241411131_241413306_241413422_241417961_241418110_241431678_241431775_241434157_241434322_241434961_241435031_241436480_241436539_241441303_241441557_241456746_241456923_241462522_241462613_241463334_241463469_241463898_241463981_241468139_241468378_241475856_241475988_241483464_241483534_241484241_241484332_241489961_241490045_241491060_241491180_241491515_241491680_241492928_241493037_241493292_241493445_241494007
transcript_124741.known	chr2	+	2122	18	FSM	ENSG00000006607.14	ENST00000627550.2	2122	18	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_17	18.4565326813006	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCGCCTGTCCCACCTTC	241353176	True	NA	NA	False	NA	NA	NA	241356288	241465778	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241356389_241373083_241373291_241403827_241403933_241404798_241404842_241407536_241407616_241411032_241411131_241413306_241413422_241417961_241418110_241431678_241431775_241434157_241434322_241434961_241435031_241436480_241436539_241441303_241441557_241456746_241456923_241462522_241462613_241463334_241463469_241463898_241463981_241465673
transcript_124743.nic	chr2	+	5295	13	ISM	ENSG00000006607.14	ENST00000627550.2	2122	18	-52	20514	-48	-1885	5prime_fragment	FALSE	canonical	3	36	junction_4	9.32849577013	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATCAAGGCTTTCTTCCG	241353124	True	NA	NA	False	NA	NA	NA	241356236	241445264	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_241356389_241373083_241373291_241403827_241403933_241404798_241404842_241407536_241407616_241411032_241411131_241413306_241413422_241417961_241418110_241431678_241431775_241434157_241434322_241434961_241435031_241436480_241436539_241441303
transcript_124760.known	chr2	-	4515	12	FSM	ENSG00000115694.15	ENST00000316586.9	4515	12	0	0	0	0	multi-exon	FALSE	canonical	3	493	junction_11	142.268631948029	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATCCACAAACCCATCCAA	-241496953	True	NA	NA	False	AATAAA	-20	NA	241508584	241492669	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256_241499415_241500172_241500282_241500739_241500797_241501477_241501709_241508005_241508136_241508442
transcript_124761.known	chr2	-	2210	12	FSM	ENSG00000115694.15	ENST00000403346.7	2210	12	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_11	250.340528411381	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGGTGTGTGTGGTGGGG	-241508604	False	NA	-4	True	AATAAA	-18	NA	241508688	241495016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256_241499415_241500172_241500282_241500739_241500797_241501477_241501709_241508005_241508136_241508504
transcript_124786.known	chr2	-	2251	11	FSM	ENSG00000115694.15	ENST00000401869.5	2251	11	0	0	0	0	multi-exon	FALSE	canonical	3	823	junction_4	72.0308267341143	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCAGGTGTGTGTGGTGG	-241508278	False	NA	-6	True	AATAAA	-16	NA	241508362	241495018	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256_241499415_241500172_241500282_241500739_241500797_241501477_241501709_241508005
transcript_124787.known	chr2	-	2459	11	FSM	ENSG00000115694.15	ENST00000535007.5	2459	11	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_10	253.244960463185	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTGCTTCTCTAGAGGT	-241508611	False	NA	-1	True	AATAAA	-40	NA	241508695	241494706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256_241499415_241500172_241500282_241500739_241500797_241501477_241501709_241508442
transcript_124789.known	chr2	-	2556	11	FSM	ENSG00000115694.15	ENST00000543554.5	2556	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_10	282.324299343857	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTGCTTCTCTAGAGGT	NA	False	NA	-1	True	AATAAA	-40	NA	241509572	241494706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256_241499415_241500172_241500282_241500739_241500797_241501477_241501709_241509222
transcript_124806.known	chr2	-	1904	11	FSM	ENSG00000115694.15	ENST00000405883.7	1904	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_9	302.842351727759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATGCAGGTGTGTGTGG	-241496925	True	NA	-9	True	AATAAA	-13	NA	241508556	241495021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256_241499415_241500172_241500282_241500739_241500797_241508005_241508136_241508442
transcript_124873.nnic	chr2	+	2824	6	NNC	ENSG00000176720.6	novel	2626	5	NA	NA	-4	0	at_least_one_novel_splicesite	TRUE	canonical	3	10	junction_3	83.1158228016784	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGAATGTCACTGTGTGT	241556079	True	NA	38	True	AATAAA	-28	NA	241558740	241574131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_241558994_241559454_241559704_241560070_241560265_241562347_241562477_241570124_241570289_241572296
transcript_124881.known	chr2	+	2626	5	FSM	ENSG00000176720.6	ENST00000318407.5	2626	5	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	33.1888535505522	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGAATGTCACTGTGTGT	241556083	True	NA	38	True	AATAAA	-28	NA	241558744	241574131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241558994_241559454_241559704_241562347_241562477_241570124_241570289_241572296
transcript_124887.nnic	chr2	+	2500	4	NIC	ENSG00000176720.6	novel	2626	5	NA	NA	-40	-2	combination_of_known_splicesites	FALSE	canonical	3	25	junction_3	59.4885609919158	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGACAGAATGTCACTGTGT	NA	False	NA	36	True	AATAAA	-26	NA	241558704	241574129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_241558994_241559454_241559704_241562347_241562477_241572296
transcript_124888.nnic	chr2	+	2530	4	NIC	ENSG00000176720.6	novel	2626	5	NA	NA	-33	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_2	87.2633307230986	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGAATGTCACTGTGTGT	241556050	True	NA	38	True	AATAAA	-28	NA	241558711	241574131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_241558994_241559454_241559704_241570124_241570289_241572296
transcript_124893.nnic	chr2	+	2408	3	NIC	ENSG00000176720.6	novel	2626	5	NA	NA	-160	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_1	96.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGAATGTCACTGTGTGT	NA	False	NA	38	True	AATAAA	-28	NA	241558584	241574131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_241558994_241570124_241570289_241572296
transcript_124897.known	chr2	-	2076	6	FSM	ENSG00000176946.13	ENST00000407315.6	2076	6	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_5	36.29876030941	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTGCGTAGGCTGTACA	-241635482	True	NA	-2	True	AATAAA	-38	NA	241637158	241584404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241584726_241601895_241602000_241602969_241603080_241606313_241606474_241632916_241634080_241636940
transcript_124899.nic	chr2	-	2217	6	NIC	ENSG00000176946.13	novel	2076	6	NA	NA	-82	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	180.16481343481	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTGAGGATTTTGAATAT	-241637036	False	NA	-24	True	AATAAA	-16	NA	241637240	241584426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_-_241584726_241601814_241602000_241602969_241603080_241606313_241606474_241632916_241634080_241636940
transcript_124904.known	chr2	-	785	5	FSM	ENSG00000176946.13	ENST00000402136.5	785	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	202.644238753536	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTGCGTAGGCTGTACA	-241616863	True	NA	-2	True	AATAAA	-38	NA	241617501	241584404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241584726_241601895_241602000_241602969_241603080_241606313_241606474_241617411
transcript_124905.known	chr2	-	833	5	FSM	ENSG00000176946.13	ENST00000402545.5	833	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	234.826930951286	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTGAGGATTTTGAATAT	-241616852	True	NA	-24	True	AATAAA	-16	NA	241617490	241584426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241584726_241601814_241602000_241602969_241603080_241606313_241606474_241617411
transcript_124912.nic	chr2	+	2028	14	NIC	ENSG00000168397.17	novel	1566	13	NA	NA	47	0	combination_of_known_junctions	FALSE	canonical	3	139	junction_3	205.092647559195	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGGTTTGGAATTAAAGT	NA	False	NA	-24	True	NA	NA	NA	241637259	241672592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_241637725_241651009_241651112_241651263_241651336_241653306_241653370_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311_241671406_241672190
transcript_124913.nic	chr2	+	2872	14	NIC	ENSG00000168397.17	novel	2797	13	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	139	junction_3	205.092647559195	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGTCTATTTTTTCCT	241626264	True	NA	92	True	AAAACA	-3	NA	241637680	241673857	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr2_+_241637725_241651009_241651112_241651263_241651336_241653306_241653370_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311_241671406_241672190
transcript_124917.known	chr2	+	2414	13	FSM	ENSG00000168397.17	ENST00000482507.5	2414	13	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_3	212.914823866781	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGACATGAATTTCTGGG	241626281	True	NA	15	True	ATTAAA	-22	NA	241637697	241672631	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653306_241653370_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311
transcript_124929.known	chr2	+	2797	13	FSM	ENSG00000168397.17	ENST00000404914.8	2797	13	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_12	86.483941990535	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGTCTATTTTTTCCT	241626276	True	NA	92	True	AAAACA	-3	NA	241637692	241673857	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311_241671406_241672190
transcript_124931.known	chr2	+	3294	13	FSM	ENSG00000168397.17	ENST00000405546.7	3294	13	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_12	195.726903703434	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTTGTGTCTATTTTTT	NA	False	NA	89	True	NA	NA	NA	241637212	241673854	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311_241671426_241672190
transcript_124933.known	chr2	+	1685	13	FSM	ENSG00000168397.17	ENST00000402096.5	1685	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_12	196.745376198668	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACACAGACATGAATTTCT	241626195	True	NA	12	True	ATTAAA	-19	NA	241637611	241672628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311_241671442_241672190
transcript_124942.nic	chr2	+	2395	12	ISM	ENSG00000168397.17	ENST00000402096.5	1685	13	42	-3	-8	0	intron_retention	FALSE	canonical	3	572	junction_1	79.7273245568402	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGACATGAATTTCTGGG	241626237	True	NA	15	True	ATTAAA	-22	NA	241637653	241672631	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311
transcript_124991.known	chr2	+	807	7	FSM	ENSG00000168397.17	ENST00000425239.5	807	7	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_1	91.2761378090316	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCGTTTATGAAGGCCCT	241626290	True	NA	NA	False	NA	NA	NA	241637706	241659448	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545_241654648_241655270_241655344_241659107
transcript_124996.known	chr2	+	556	6	FSM	ENSG00000168397.17	ENST00000479554.5	556	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	368.695321369827	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGTTTCCCCTCAGAGCTT	241626276	True	NA	-58	True	NA	NA	NA	241637692	241654705	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241651883_241651975_241653511_241653611_241654545
transcript_124999.known	chr2	+	1103	6	FSM	ENSG00000168397.17	ENST00000483778.5	1103	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	287.531146138988	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCATTGCCTTTTTCAC	241626245	True	NA	NA	False	NA	NA	NA	241637661	241659772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545_241654648_241659107
transcript_125.known	SIRV4	+	950	2	FSM	SIRV4C	SIRV410	950	2	0	0	0	0	multi-exon	FALSE	canonical	3	1905	junction_1	0	1363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTATATGTTGTTGCTG	NA	False	NA	NA	False	NA	NA	NA	1455	2771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV4_+_1886_2251
transcript_125002.known	chr2	+	762	5	FSM	ENSG00000168397.17	ENST00000475195.5	762	5	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_1	106.161433675323	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGGCTTTTGAGCACTGT	241626276	True	NA	3	True	AGTAAA	-27	NA	241637692	241655002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545
transcript_125011.known	chr2	-	1051	5	FSM	ENSG00000168393.13	ENST00000305784.7	1051	5	0	0	0	0	multi-exon	FALSE	canonical	3	704	junction_3	203.794473673846	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGTGGAACGCTTCAC	-241674825	True	NA	-9	True	AGTAAA	-15	NA	241686815	241675746	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241676238_241678451_241678650_241680228_241680320_241685768_241685878_241686653
transcript_125016.known	chr2	-	1089	4	FSM	ENSG00000168393.13	ENST00000400770.6	1089	4	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_2	386.09411633262	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGTGGAACGCTTCAC	NA	False	NA	-9	True	AGTAAA	-15	NA	241686944	241675746	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241676238_241678451_241678650_241685768_241685878_241686653
transcript_125021.known	chr2	-	890	2	FSM	ENSG00000168393.13	ENST00000464603.1	890	2	0	0	0	0	multi-exon	FALSE	canonical	3	1120	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCCTCCCACCTCAGCA	-241674791	True	NA	NA	False	NA	NA	NA	241686781	241685115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241685878_241686653
transcript_125032.nnic	chr2	+	5072	9	NNC	ENSG00000168395.16	novel	5197	8	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_4	72.4636762454128	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTGAAAGTGCATCTGTA	241697508	True	NA	NA	False	AATAAA	-22	NA	241702038	241729478	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr2_+_241702103_241704652_241704725_241709215_241709383_241711376_241711489_241711977_241712072_241722938_241723075_241723209_241723272_241724988_241725297_241725421
transcript_125039.known	chr2	+	946	8	FSM	ENSG00000168395.16	ENST00000406941.5	946	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	72.1322481591264	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTTGTTTGCCTGTGCT	241697515	True	NA	NA	False	AATAAA	-21	NA	241702045	241724036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241702103_241704652_241704725_241709215_241709383_241711376_241711489_241711977_241712072_241722938_241723075_241723209_241723272_241723790
transcript_125041.known	chr2	+	5197	8	FSM	ENSG00000168395.16	ENST00000313552.11	5197	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	59.5493278633738	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTGAAAGTGCATCTGTA	241697508	True	NA	NA	False	AATAAA	-22	NA	241702038	241729478	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241702103_241704652_241704725_241709215_241709383_241711376_241711489_241711977_241712072_241722938_241723075_241723209_241723272_241724988
transcript_125052.known	chr2	+	2376	7	FSM	ENSG00000168395.16	ENST00000482774.5	2376	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	84.2074158782282	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTACTAATGGGAATACAC	241697511	True	NA	-27	True	NA	NA	NA	241702041	241721715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241702103_241704652_241704725_241709215_241709383_241711376_241711489_241711977_241712072_241719482_241719613_241719975
transcript_125058.known	chr2	+	920	6	FSM	ENSG00000168395.16	ENST00000489509.1	920	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	82.6380057842637	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCGGCTCTGGATCTAGC	241697534	False	NA	NA	False	NA	NA	NA	241702064	241719919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241702103_241704652_241704725_241709215_241709383_241711376_241711489_241711977_241712072_241719482
transcript_125062.known	chr2	+	822	5	FSM	ENSG00000168395.16	ENST00000492488.5	822	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	74.643737178681	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGACAGGAGGATGGTGAG	241697504	True	NA	NA	False	NA	NA	NA	241702034	241712380	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241702103_241704652_241704725_241709215_241709383_241711376_241711489_241711977
transcript_125067.known	chr2	+	543	4	FSM	ENSG00000168395.16	ENST00000493261.5	543	4	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	7.84573486395988	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGGTGGCTTACGCCTG	241697515	True	NA	NA	False	NA	NA	NA	241702045	241711623	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_241702103_241704652_241704725_241709215_241709383_241711376
transcript_125076.known	chr2	-	2097	5	FSM	ENSG00000188389.11	ENST00000334409.10	2097	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	0.707106781186548	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTTCTGTCCTGTCTGGT	-241858876	True	NA	NA	False	ATTAAA	-17	NA	241858894	241849883	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241851298_241851948_241851984_241852197_241852354_241852620_241852981_241858762
transcript_125078.known	chr2	-	507	3	FSM	ENSG00000216921.9	ENST00000401641.2	507	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTCTCTAGCGCATCTCT	-241902529	True	NA	NA	False	NA	NA	NA	241902551	241894036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_-_241894340_241897185_241897335_241902496
transcript_125079.known	chr2	+	1235	8	FSM	ENSG00000220804.10	ENST00000456398.5	1235	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	8.56666534317997	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCTTTTTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	242088632	242140638	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr2_+_242088802_242094886_242095028_242114638_242114742_242116182_242116233_242118964_242119058_242122286_242122456_242138783_242138889_242140233
transcript_125084.known	chr20	-	1420	9	FSM	ENSG00000196476.12	ENST00000382369.9	1420	9	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_8	69.173581481661	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCAGTGTCTCGGG	-287973	True	NA	-13	True	AATAAA	-18	NA	290429	270862	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_271268_275967_276087_276792_276880_277043_277146_277225_277384_278329_278430_279171_279331_283962_284082_290258
transcript_125087.nic	chr20	-	2258	9	NIC	ENSG00000196476.12	novel	1576	11	NA	NA	-14	0	intron_retention	FALSE	canonical	3	115	junction_8	58.1162627841812	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCAGTGTCTCGGG	-287987	True	NA	-13	True	AATAAA	-18	NA	290443	270862	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_271268_275967_276880_277043_277146_277225_277384_278329_278430_279171_279331_283962_284082_289558_289677_290258
transcript_125091.known	chr20	+	2752	1	FSM	ENSG00000247315.4	ENST00000500893.4	2752	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	775	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGCACTATTTCCTTTC	290702	True	NA	20	True	AATAAA	-25	NA	297569	300321	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_297600_300300
transcript_125092.known	chr20	+	2074	5	FSM	ENSG00000125841.13	ENST00000382285.7	2074	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	110.590178135312	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGACTTTGTTTCCTTTC	345692	True	NA	6	True	AATAAA	-14	NA	347110	354862	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_347143_347433_347513_349248_349364_349637_349833_353209
transcript_125096.known	chr20	+	2088	4	FSM	ENSG00000125841.13	ENST00000382291.7	2088	4	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	33.0689515339624	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTTTCCTTTCTCCCTG	346659	False	NA	12	True	AATAAA	-20	NA	347023	354868	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_347143_349248_349364_349637_349833_353209
transcript_125098.known	chr20	+	846	3	FSM	ENSG00000125841.13	ENST00000492242.5	846	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	68.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCACCATAACCCCCTCTC	346518	False	NA	NA	False	NA	NA	NA	346882	353680	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_347143_349248_349364_353209
transcript_125099.known	chr20	+	4673	1	FSM	ENSG00000177732.9	ENST00000342665.5	4673	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTCTCATTGTCTGTTT	322977	True	NA	17	True	AATAAA	-17	NA	325551	330224	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_325600_330200
transcript_125100.known	chr20	+	504	5	FSM	ENSG00000125841.13	ENST00000608467.5	504	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	103.608337019759	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTCAAAAGTCTTGTTGA	345701	True	NA	NA	False	AATGAA	-12	NA	347119	359405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_347143_349248_349364_349637_349833_355325_355350_359258
transcript_125101.known	chr20	+	2356	4	FSM	ENSG00000101255.12	ENST00000217233.9	2356	4	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	13.0213499897497	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTTTTCTCTGCAATT	380744	False	NA	NA	False	AATAAA	-18	NA	380759	397559	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_381170_388010_388302_391286_391580_396197
transcript_125102.known	chr20	+	1070	4	FSM	ENSG00000101255.12	ENST00000449710.5	1070	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	47.5184174820669	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCGCCGCGGGGCCTACG	381233	False	NA	NA	False	NA	NA	NA	381245	396428	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_381501_388010_388302_391286_391580_396197
transcript_125108.known	chr20	+	3701	12	FSM	ENSG00000125826.21	ENST00000356286.10	3701	12	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_6	31.9356274013939	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAAAGCTTGGTAATGCC	406651	True	NA	NA	False	ATTAAA	-28	NA	408298	432139	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_408780_409880_410026_417525_417620_417731_417931_419346_419469_419557_419732_420870_421032_422126_422239_427312_427493_428490_428590_428950_429095_430349
transcript_125111.known	chr20	+	2599	11	FSM	ENSG00000125826.21	ENST00000640614.1	2599	11	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_6	31.1069124150887	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGATGAGTGTGATGTCC	407144	True	NA	6	True	ATTAAA	-14	NA	408064	430964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_408780_409880_410026_417525_417620_417731_417931_419346_419469_419557_419732_422126_422239_427312_427493_428490_428590_428950_429095_430349
transcript_125113.known	chr20	+	2511	11	FSM	ENSG00000125826.21	ENST00000353660.7	2511	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	42.0286806835523	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATGAGTGTGATGTCCTT	408120	False	NA	8	True	ATTAAA	-16	NA	408170	430966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_408780_417525_417620_417731_417931_419346_419469_419557_419732_420870_421032_422126_422239_427312_427493_428490_428590_428950_429095_430349
transcript_125114.known	chr20	+	2208	10	FSM	ENSG00000125826.21	ENST00000382181.2	2208	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	43.7554934822651	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATGAGTGTGATGTCCTT	406665	True	NA	8	True	ATTAAA	-16	NA	408312	430966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_408780_417525_417620_417731_417931_419346_419469_419557_419732_422126_422239_427312_427493_428490_428590_428950_429095_430349
transcript_125118.known	chr20	-	3132	8	FSM	ENSG00000125875.15	ENST00000680515.1	3132	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	58.0365824110895	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACAGAGCCCTGTATCAA	-460322	True	NA	-49	True	NA	NA	NA	462516	436327	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_437599_437861_438842_439107_439296_440247_440390_441587_441690_441856_442044_445049_445131_462335
transcript_125119.known	chr20	-	4234	7	FSM	ENSG00000125875.15	ENST00000681129.1	4234	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	46.8033711986173	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAAACATAAGTTTCCCT	-460325	True	NA	-22	True	AATAAA	-2	NA	462519	435491	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_438842_439107_439296_440247_440390_441587_441690_441856_442044_445049_445131_462335
transcript_125121.known	chr20	+	1200	3	FSM	ENSG00000125826.21	ENST00000475269.5	1200	3	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_2	32.5	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGACTGCTTTTTCAT	407157	False	NA	26	True	AATAAA	-19	NA	408077	410764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_408780_409880_410026_410411
transcript_125122.known	chr20	+	1024	3	FSM	ENSG00000125826.21	ENST00000400245.3	1024	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	47.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGACTGCTTTTTCAT	406657	True	NA	26	True	AATAAA	-19	NA	408304	410764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_408780_409829_410026_410411
transcript_125123.known	chr20	+	790	2	FSM	ENSG00000125826.21	ENST00000400247.3	790	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGACTGCTTTTTCAT	406695	False	NA	26	True	AATAAA	-19	NA	408342	410764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_408780_410411
transcript_125124.known	chr20	-	2024	10	FSM	ENSG00000125875.15	ENST00000461304.5	2024	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	53.429080720771	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCCTGAGTTCTGTGAG	-460337	True	NA	-10	True	AATAAA	-14	NA	462531	435479	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_435971_437439_437599_438549_438842_439107_439296_440247_440390_441587_441690_441856_442044_445049_445131_447888_448075_462335
transcript_125125.known	chr20	+	2752	12	FSM	ENSG00000125826.21	ENST00000382214.7	2752	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	44.6164554752342	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATGAGTGTGATGTCCTT	407857	False	NA	8	True	ATTAAA	-16	NA	408049	430966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_408780_409880_410026_417525_417620_417731_417931_419346_419469_419557_419732_420870_421007_422126_422239_427312_427493_428490_428590_428950_429095_430349
transcript_125126.known	chr20	-	4446	8	FSM	ENSG00000125875.15	ENST00000354200.5	4446	8	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_4	14.1392491790384	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCCTGAGTTCTGTGAG	-460339	True	NA	-10	True	AATAAA	-14	NA	462533	435479	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_438842_439107_439296_440247_440390_441587_441690_441856_442044_445049_445131_447888_448075_462335
transcript_125127.known	chr20	-	2708	10	FSM	ENSG00000125875.15	ENST00000679741.1	2708	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	55.9585384431309	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAAACATAAGTTTCCCT	-460345	True	NA	-22	True	AATAAA	-2	NA	462539	435491	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_435971_437439_437599_437861_438842_439107_439296_440247_440390_441587_441690_441856_442044_445049_445131_447888_448075_462335
transcript_125128.known	chr20	-	3394	9	FSM	ENSG00000125875.15	ENST00000681742.1	3394	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	45.2076804868376	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCATATGTGGTTACTAAT	-460372	True	NA	-23	True	AATAAA	-2	NA	462566	436301	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_437599_437861_438842_439107_439296_440247_440390_441587_441690_441856_442044_445049_445131_447888_448075_462335
transcript_125129.known	chr20	-	2982	9	FSM	ENSG00000125875.15	ENST00000680284.1	2982	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	45.8405865472945	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACTGGTAAACATAAGTT	-460347	True	NA	-27	True	NA	NA	NA	462541	435496	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_435971_437425_438842_439107_439296_440247_440390_441587_441690_441856_442044_445049_445131_447888_448075_462335
transcript_125132.known	chr20	-	2822	14	FSM	ENSG00000101266.19	ENST00000643660.1	2822	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	212.686423621489	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCACTGAATATCTGTGTC	-525542	True	NA	-14	True	NA	NA	NA	543732	472507	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_473951_483927_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499832_499935_505117_505230_508450_508661_543671
transcript_125135.known	chr20	-	12984	14	FSM	ENSG00000101266.19	ENST00000217244.9	12984	14	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_12	269.9979618595	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTGTCTGAGTACTCC	-525600	True	NA	-4	True	NA	NA	NA	543790	472497	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499832_499935_505117_505230_508450_508661_527932_528050_543671
transcript_125136.known	chr20	-	4290	14	FSM	ENSG00000101266.19	ENST00000645910.1	4290	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_10	285.650177084908	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCTTTAATTTTTTTTAA	-525569	True	NA	-9	True	ACTAAA	-34	NA	543759	481149	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499524_499631_499832_499935_505117_505230_508450_508661_543671
transcript_125140.known	chr20	-	1485	13	FSM	ENSG00000101266.19	ENST00000400217.7	1485	13	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_12	220.526390459031	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGAACTTTTCATAACTCAG	-525540	True	NA	21	True	NA	NA	NA	543730	483764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499832_499935_505117_505230_508450_508606_543671
transcript_125141.known	chr20	-	2586	13	FSM	ENSG00000101266.19	ENST00000645234.1	2586	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	217.242504026159	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTTGGTTTTATTTATCA	-525522	True	NA	-33	True	NA	NA	NA	543712	482714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_484091_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499832_499935_505117_505230_508450_508661_543671
transcript_125145.known	chr20	-	4047	12	FSM	ENSG00000101266.19	ENST00000349736.10	4047	12	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_11	225.186570948485	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTCCCTGCAGCCTGAG	-525602	True	NA	31	True	AATAAA	-17	NA	543792	481109	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499832_499935_505117_505230_543671
transcript_125147.known	chr20	-	2545	12	FSM	ENSG00000101266.19	ENST00000642689.1	2545	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	230.766813719065	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTTTATTTATCAAGGT	-525542	True	NA	-29	True	AATAAA	-4	NA	543732	482710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499832_499935_505117_505230_508450_508661_543671
transcript_125152.known	chr20	-	1806	12	FSM	ENSG00000101266.19	ENST00000647026.1	1806	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	233.422505589548	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTGGCTCTTGTGGAA	-525542	True	NA	NA	False	NA	NA	NA	543732	483389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_484077_486375_486463_487426_487576_488677_488779_489779_489882_495718_495803_497720_497781_499254_499306_499832_499935_505117_505230_508450_508661_543671
transcript_125157.known	chr20	-	1419	3	FSM	ENSG00000101266.19	ENST00000642160.1	1419	3	0	0	0	0	multi-exon	FALSE	canonical	3	663	junction_2	41	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTCGCCCAGGCTGGA	-525626	True	NA	NA	False	NA	NA	NA	543816	504165	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_505230_508450_508661_543671
transcript_125159.known	chr20	-	1490	13	FSM	ENSG00000101266.19	ENST00000400227.8	1490	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	217.242504026159	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAAAAAATGCTGCAGCA	-525506	True	NA	NA	False	NA	NA	NA	543696	478464	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_478761_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499832_499935_505117_505230_508450_508661_543671
transcript_125160.known	chr20	-	2528	2	FSM	ENSG00000271303.2	ENST00000381962.4	2528	2	0	0	0	0	multi-exon	FALSE	canonical	3	710	junction_1	0	376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGGGTGTGCAATTCCTT	-649741	True	NA	-1	True	AATAAA	-26	NA	653200	646614	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_648918_652975
transcript_125162.known	chr20	-	2654	6	FSM	ENSG00000101276.18	ENST00000217254.11	2654	6	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_4	10.507140429251	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCAGATCTTCCTTCAAA	-775644	False	NA	-7	True	AATAAA	-18	NA	776015	760079	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_761239_761700_761825_763497_764004_765207_765826_768296_768483_775954
transcript_125163.nic	chr20	-	3139	6	NIC	ENSG00000101276.18	novel	2654	6	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_4	13.9513440212762	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCAGATCTTCCTTCAAA	-775620	True	NA	-7	True	AATAAA	-18	NA	775991	760079	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_761239_761700_761825_763497_764004_765207_766335_768296_768483_775954
transcript_125165.nic	chr20	-	3601	5	NIC	ENSG00000101276.18	novel	2654	6	NA	NA	-6	0	intron_retention	FALSE	canonical	3	13	junction_3	15.5402702679201	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCAGATCTTCCTTCAAA	-775620	True	NA	-7	True	AATAAA	-18	NA	775991	760079	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_761825_763497_764004_765207_766335_768296_768483_775954
transcript_125166.known	chr20	-	3106	5	FSM	ENSG00000101276.18	ENST00000488495.3	3106	5	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_4	15.2807067899361	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCCTGCTTTTACACTCA	-768129	False	NA	-21	True	AATAAA	-4	NA	768500	760093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_761239_761700_761825_763497_764004_765207_766335_768296
transcript_125169.known	chr20	+	1807	2	FSM	ENSG00000125898.13	ENST00000381941.8	1807	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTGGGCCTTCAGACTCT	833538	True	NA	7	True	AATAAA	-21	NA	833714	846277	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_833952_844707
transcript_125170.known	chr20	+	1614	2	FSM	ENSG00000125898.13	ENST00000541082.2	1614	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCCTTCAGACTCTTC	840956	True	NA	9	True	AATAAA	-23	NA	841274	846279	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_841317_844707
transcript_125173.nnic	chr20	+	2442	2	NNC	ENSG00000125898.13	novel	1614	2	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTGGGCCTTCAGACTCT	840949	True	NA	7	True	AATAAA	-21	NA	841267	846277	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_842140_844707
transcript_125178.known	chr20	-	722	4	FSM	ENSG00000101282.9	ENST00000400634.2	722	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	6.16441400296898	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCCTCTCTTTCTTTCC	-1002217	False	NA	NA	False	NA	NA	NA	1002264	960253	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_960467_967173_967315_967949_968139_1002085
transcript_125179.known	chr20	+	8154	7	FSM	ENSG00000125818.18	ENST00000335877.11	8154	7	0	0	0	0	multi-exon	FALSE	canonical	3	576	junction_6	34.1402336775183	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATTAGAGTTTTGACTCT	1109711	True	NA	NA	False	ATTAAA	-23	NA	1118601	1172246	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_1118903_1125497_1125651_1127425_1127509_1135120_1135307_1163129_1163184_1164317_1164477_1165028
transcript_125181.known	chr20	+	2042	7	FSM	ENSG00000125818.18	ENST00000246015.8	2042	7	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_6	221.092300986614	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTTTTTTAAATAGCAGC	1109707	True	NA	20	True	AATAAA	-24	NA	1118597	1167328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_1118903_1125497_1125651_1127425_1127509_1135120_1135307_1163129_1163184_1164317_1164477_1166226
transcript_125196.known	chr20	-	582	2	FSM	ENSG00000125895.6	ENST00000481747.1	582	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCCGTGAGCCGCCCGG	-1185328	False	NA	NA	False	NA	NA	NA	1185415	1181283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_1181588_1185137
transcript_125197.known	chr20	+	4995	6	FSM	ENSG00000101298.15	ENST00000381873.7	4995	6	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_5	2.03960780543711	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTTGGCCTGTTTTCTTT	1265959	True	NA	14	True	ATTAAA	-19	NA	1266315	1309328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_1266398_1266653_1266761_1296324_1296422_1297144_1297253_1300561_1300712_1304877
transcript_125202.nnic	chr20	-	951	6	NNC	ENSG00000088832.18	novel	1573	6	NA	NA	-57	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1211.59719379008	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTCTGTGTCATGGTGG	NA	False	NA	-9	True	AATAAA	-22	NA	1393221	1368980	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_1369040_1369766_1370073_1372075_1372241_1375490_1375604_1392833_1392882_1392961
transcript_125204.known	chr20	-	1082	6	FSM	ENSG00000088832.18	ENST00000381724.8	1082	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	1475.01126775357	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTTTGCCTCCACCATT	-1363092	True	NA	NA	False	ATTAAA	-33	NA	1393052	1369533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_1370073_1371021_1371148_1372075_1372241_1375490_1375604_1392833_1392882_1392961
transcript_125205.known	chr20	-	1573	6	FSM	ENSG00000088832.18	ENST00000677335.1	1573	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1476.70945009504	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCAGCTCTGTGTCATG	-1363132	True	NA	-13	True	AATAAA	-18	NA	1393092	1368984	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_1370073_1371119_1371148_1372075_1372241_1375490_1375604_1392833_1392882_1392961
transcript_125206.known	chr20	-	1261	5	FSM	ENSG00000125775.15	ENST00000381808.7	1261	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	5.1234753829798	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGTCCGCAAAGGTAATT	-1313431	True	NA	NA	False	AATAAA	-20	NA	1313639	1309974	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_1310496_1310799_1310892_1312336_1312509_1312586_1312763_1313339
transcript_125207.known	chr20	-	1514	5	FSM	ENSG00000088832.18	ENST00000400137.9	1514	5	0	0	0	0	multi-exon	FALSE	canonical	3	2573	junction_4	263.802009090151	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTCATGGTGGTTA	-1363094	True	NA	-6	True	AATAAA	-25	NA	1393054	1368977	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_1370073_1372075_1372241_1375490_1375604_1392833_1392882_1392961
transcript_125209.known	chr20	-	1520	4	FSM	ENSG00000088832.18	ENST00000439640.5	1520	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	1463.7313809424	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTCATGGTGGTTA	-1363148	True	NA	-6	True	AATAAA	-25	NA	1393108	1368977	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_1370073_1372075_1372241_1375490_1375604_1392961
transcript_125210.known	chr20	-	1452	4	FSM	ENSG00000088832.18	ENST00000618612.5	1452	4	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_2	1198.68381522772	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTCATGGTGGTTA	-1363145	True	NA	-6	True	AATAAA	-25	NA	1393105	1368977	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_1370073_1372075_1372241_1392833_1392882_1392961
transcript_125212.known	chr20	-	3564	4	FSM	ENSG00000088832.18	ENST00000381719.8	3564	4	0	0	0	0	multi-exon	FALSE	canonical	3	2573	junction_3	303.611959945952	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTATGCCGGCTTTTCT	-1363163	True	NA	-28	True	AATAAA	-3	NA	1393123	1368999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_1372241_1375490_1375604_1392833_1392882_1392961
transcript_125215.known	chr20	+	413	3	FSM	ENSG00000234684.8	ENST00000665859.2	438	3	21	4	0	-4	multi-exon	FALSE	canonical	2	8	junction_1	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATGTATCTGAATTGATC	1324599	True	NA	-1	True	AATAAA	-14	NA	1325420	1359859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_1325530_1350338_1350482_1359698
transcript_125217.known	chr20	-	1579	4	FSM	ENSG00000088832.18	ENST00000677937.1	1579	4	0	0	0	0	multi-exon	FALSE	canonical	3	2934	junction_1	149.622487911707	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGTCATGGTGGTTAT	-1363078	True	NA	-5	True	AATAAA	-26	NA	1393038	1368976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_1370073_1372075_1372241_1375490_1375604_1392833
transcript_125218.known	chr20	-	376	4	FSM	ENSG00000088832.18	ENST00000614856.2	376	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1348.11003507379	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTTTCACACACATACT	-1363114	True	NA	NA	False	TATAAA	-15	NA	1393074	1375283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_1375430_1375534_1375604_1392833_1392882_1392961
transcript_125219.known	chr20	+	2351	4	FSM	ENSG00000234684.8	ENST00000446423.2	2351	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGCCTTAGGTTGGGT	1324599	True	NA	NA	False	AATAAA	-7	NA	1325420	1378723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_1325530_1373077_1373179_1374483_1374699_1376797
transcript_125224.known	chr20	-	2800	10	FSM	ENSG00000088833.18	ENST00000476071.5	2800	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	408.401702515163	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTACTTTCTAATGGG	-1455356	True	NA	4	True	ATTAAA	-22	NA	1466918	1442161	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_1443912_1445665_1445831_1452492_1452631_1453030_1453141_1454212_1454306_1454966_1455133_1455713_1455720_1458199_1458275_1464328_1464427_1466719
transcript_125240.known	chr20	-	2721	9	FSM	ENSG00000088833.18	ENST00000216879.9	2721	9	0	0	0	0	multi-exon	FALSE	canonical	3	700	junction_6	109.321772762794	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTTTTGTACTTTCTAA	-1455287	True	NA	0	True	ATTAAA	-18	NA	1466849	1442165	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_1443912_1445665_1445831_1452492_1452631_1453030_1453141_1454212_1454306_1454966_1455133_1458199_1458275_1464328_1464427_1466719
transcript_125242.known	chr20	-	1446	9	FSM	ENSG00000088833.18	ENST00000381653.9	1446	9	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	311.842808959899	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCCTCCCTCCTGTGT	-1455262	True	NA	NA	False	NA	NA	NA	1466824	1443734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_1443912_1445665_1446150_1452492_1452631_1453030_1453141_1454212_1454306_1454966_1455133_1458199_1458275_1464328_1464427_1466719
transcript_125251.known	chr20	-	2588	8	FSM	ENSG00000088833.18	ENST00000555944.5	2588	8	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_7	410.37951573973	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTACTTTCTAATGGG	-1455343	True	NA	4	True	ATTAAA	-22	NA	1466905	1442161	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_1443912_1445665_1445831_1452492_1452631_1453030_1453141_1454212_1454306_1454966_1455038_1458199_1458275_1466719
transcript_125256.known	chr20	-	2611	8	FSM	ENSG00000088833.18	ENST00000353088.6	2611	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	357.320127433913	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTACTTTCTAATGGG	-1455266	True	NA	4	True	ATTAAA	-22	NA	1466828	1442161	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_1443912_1445665_1445831_1452492_1452631_1453030_1453141_1454966_1455133_1458199_1458275_1464328_1464427_1466719
transcript_12526.known	chr1	-	5506	5	FSM	ENSG00000052723.12	ENST00000369528.9	5506	5	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_4	126.235890300659	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGCTAATATTTTACTT	-114771700	True	NA	NA	False	AATAAA	-21	NA	114780685	114769478	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_114774373_114776345_114776460_114779141_114779285_114780109_114780216_114780436
transcript_125261.known	chr20	+	4570	9	FSM	ENSG00000198053.12	ENST00000622179.4	4570	9	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_8	18.0190871022924	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTAGTGGTTACTATGTG	1894233	False	NA	NA	False	AATAAA	-22	NA	1894507	1940592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_1894518_1895438_1895527_1915098_1915456_1921394_1921713_1922312_1922646_1924763_1924878_1927874_1927900_1934714_1934767_1937319
transcript_125263.known	chr20	+	3867	9	FSM	ENSG00000198053.12	ENST00000356025.7	3867	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.5214154679352	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGGTGTTCAGTATTCT	1894772	False	NA	NA	False	AATAAA	-23	NA	1894782	1939897	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_1894797_1895438_1895527_1915098_1915456_1921394_1921713_1922312_1922646_1924763_1924878_1927874_1927900_1934714_1934755_1937319
transcript_125266.nnic	chr20	+	2521	9	NNC	ENSG00000198053.12	novel	4580	8	NA	NA	81	-1432	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	14.6351460532514	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCTGTCTGTCATGTG	1894853	False	NA	5	True	AAAACA	-13	NA	1894863	1938462	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_1894967_1895438_1895527_1915098_1915456_1921394_1921713_1922312_1922646_1924763_1924878_1927874_1927900_1934714_1934755_1937319
transcript_125267.nnic	chr20	+	3953	9	NNC	ENSG00000198053.12	novel	4580	8	NA	NA	81	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	14.6351460532514	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTCCGGTGTTCAGTAT	1894853	False	NA	NA	False	AATAAA	-20	NA	1894863	1939894	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_1894967_1895438_1895527_1915098_1915456_1921394_1921713_1922312_1922646_1924763_1924878_1927874_1927900_1934714_1934755_1937319
transcript_12527.nnic	chr1	-	1528	5	NIC	ENSG00000052723.12	novel	5506	5	NA	NA	-23	663	combination_of_known_splicesites	FALSE	canonical	3	72	junction_4	133.482910891245	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGTAGTCAGTTTTTCA	-114771672	True	NA	NA	False	AATAAA	-10	NA	114780657	114773478	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_114774373_114776345_114776460_114779141_114779285_114780109_114780216_114780386
transcript_125272.known	chr20	+	6469	4	FSM	ENSG00000125834.13	ENST00000381482.8	6469	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	49.8018295067784	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGTTTTGTGGTTTGTTG	2101261	True	NA	49	True	AATAAA	-43	NA	2101826	2148555	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_2102176_2102767_2103366_2116665_2117416_2143783
transcript_125277.nic	chr20	+	6244	3	ISM	ENSG00000125834.13	ENST00000381482.8	6469	4	817	0	-247	0	3prime_fragment	FALSE	canonical	3	93	junction_1	20.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGTTTTGTGGTTTGTTG	2101672	True	NA	49	True	AATAAA	-43	NA	2102643	2148555	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_2103366_2116665_2117416_2143783
transcript_125280.known	chr20	+	536	2	FSM	ENSG00000226644.5	ENST00000411839.1	536	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGATGGTGTTGACTA	2207203	False	NA	3	True	ATTAAA	-14	NA	2207226	2213151	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_2207520_2212908
transcript_125282.known	chr20	-	985	8	FSM	ENSG00000125835.20	ENST00000474384.2	985	8	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_6	2232.25784846662	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTCTTAAGAGAACATTATA	-2435032	True	NA	NA	False	NA	NA	NA	2470732	2461659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_2461794_2462635_2462762_2463088_2463228_2463746_2463900_2465707_2465820_2467191_2467316_2467606_2467759_2470687
transcript_125287.known	chr20	-	1008	7	FSM	ENSG00000125835.20	ENST00000438552.6	1008	7	0	0	0	0	multi-exon	FALSE	canonical	3	1774	junction_1	1204.088728735	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGGATCTTTATTTTTA	-2435153	True	NA	NA	False	AATAAA	-26	NA	2470853	2461633	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_2461794_2462635_2462762_2463088_2463228_2463746_2463900_2465707_2465820_2467606_2467759_2470687
transcript_125289.known	chr20	-	1082	7	FSM	ENSG00000125835.20	ENST00000381342.7	1082	7	0	0	0	0	multi-exon	FALSE	canonical	3	3337	junction_1	655.225851647099	1449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGCACCTATGGATCTT	-2435089	True	NA	NA	False	AATAAA	-18	NA	2470789	2461641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_2461940_2462635_2462762_2463088_2463228_2463746_2463900_2465707_2465820_2467606_2467759_2470687
transcript_125301.known	chr20	-	3415	6	FSM	ENSG00000088876.13	ENST00000278772.9	3415	6	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	9.62081077664456	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAACTTGTTTTATTTT	-2508354	True	NA	NA	False	AATAAA	-31	NA	2508915	2481816	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_2484657_2492698_2492826_2493518_2493578_2493777_2494045_2500655_2500743_2508880
transcript_12532.known	chr1	-	349	4	FSM	ENSG00000052723.12	ENST00000510745.5	349	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	118.558939866305	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCATCAGCAGTGAGTCT	-114771527	False	NA	NA	False	NA	NA	NA	114780512	114774344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_114774373_114776345_114776460_114779141_114779285_114780448
transcript_125329.nic	chr20	+	2468	12	ISM	ENSG00000101361.17	ENST00000651302.1	1768	14	6	-320	6	0	intron_retention	FALSE	canonical	3	195	junction_11	214.496373430592	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCGTGTTCCCCAATAAAA	2645901	True	NA	-20	True	NA	NA	NA	2652598	2658359	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_2652664_2652841_2652932_2653278_2653394_2654413_2654576_2654748_2654948_2655324_2655513_2655594_2655747_2655933_2656035_2656400_2656550_2656773_2656896_2657080_2657219_2657372
transcript_125331.known	chr20	+	1913	12	FSM	ENSG00000101361.17	ENST00000329276.10	1913	12	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_1	236.043524491873	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTCATGTTCTTTATT	2645934	True	NA	14	True	AATAAA	-16	NA	2652631	2658393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_2652664_2652841_2652932_2653278_2653394_2654413_2654576_2654748_2654948_2655324_2655513_2655594_2655747_2655933_2656035_2656400_2656550_2656773_2656896_2657080_2657219_2657928
transcript_125333.nic	chr20	+	2218	12	NIC	ENSG00000101361.17	novel	1768	14	NA	NA	-2	-79	intron_retention	FALSE	canonical	3	195	junction_11	218.52306646785	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAAGCCCCAGGAGGTTC	2645932	True	NA	42	True	AAAAAG	-9	NA	2652629	2657960	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_2652664_2652841_2652932_2653278_2653394_2654413_2654576_2654748_2654948_2655324_2655513_2655594_2655747_2655933_2656215_2656400_2656550_2656773_2656896_2657080_2657219_2657372
transcript_125334.nic	chr20	+	2652	12	NIC	ENSG00000101361.17	novel	1768	14	NA	NA	2	0	intron_retention	FALSE	canonical	3	195	junction_11	218.52306646785	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCGTGTTCCCCAATAAAA	2645897	True	NA	-20	True	NA	NA	NA	2652594	2658359	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_2652664_2652841_2652932_2653278_2653394_2654413_2654576_2654748_2654948_2655324_2655513_2655594_2655747_2655933_2656215_2656400_2656550_2656773_2656896_2657080_2657219_2657372
transcript_125336.nic	chr20	+	2535	12	NIC	ENSG00000101361.17	novel	1913	12	NA	NA	-403	0	combination_of_known_junctions	FALSE	canonical	3	365	junction_1	242.002356384949	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTCATGTTCTTTATT	NA	False	NA	14	True	AATAAA	-16	NA	2652189	2658393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_2652664_2652841_2652932_2653278_2653394_2654413_2654576_2654748_2654948_2655324_2655513_2655594_2655747_2655933_2656215_2656400_2656550_2656773_2656896_2657080_2657219_2657928
transcript_12535.known	chr1	-	5494	5	FSM	ENSG00000052723.12	ENST00000060969.6	5494	5	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_1	71.2548243980715	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGCTAATATTTTACTT	-114771700	True	NA	NA	False	AATAAA	-21	NA	114780685	114769478	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_114774373_114776345_114776460_114779141_114779285_114780109_114780216_114780448
transcript_125350.nic	chr20	+	1418	11	ISM	ENSG00000101361.17	ENST00000651302.1	1768	14	6	884	6	-63	5prime_fragment	FALSE	canonical	3	365	junction_1	186.754384152019	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGGCTGCACTTGCCCT	2645901	True	NA	-58	True	AAGAAA	-22	NA	2652598	2657155	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_2652664_2652841_2652932_2653278_2653394_2654413_2654576_2654748_2654948_2655324_2655513_2655594_2655747_2655933_2656035_2656400_2656550_2656773_2656896_2657080
transcript_125351.nic	chr20	+	1522	11	ISM	ENSG00000101361.17	ENST00000651302.1	1768	14	-35	821	-35	0	5prime_fragment	FALSE	canonical	3	365	junction_1	186.754384152019	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTAGGCAGCACGGCCC	NA	False	NA	5	True	AAAACA	-27	NA	2652557	2657218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_2652664_2652841_2652932_2653278_2653394_2654413_2654576_2654748_2654948_2655324_2655513_2655594_2655747_2655933_2656035_2656400_2656550_2656773_2656896_2657080
transcript_12536.known	chr1	-	470	3	FSM	ENSG00000052723.12	ENST00000475335.5	470	3	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_2	8.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAATCTTGAGATTGTTT	-114771649	True	NA	-19	True	AATAAA	-17	NA	114780634	114779106	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_114779285_114780109_114780216_114780448
transcript_12537.known	chr1	-	415	2	FSM	ENSG00000052723.12	ENST00000466657.1	415	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAATCTTGAGATTGTTT	-114771700	True	NA	-19	True	AATAAA	-17	NA	114780685	114779106	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_114779285_114780448
transcript_12538.known	chr1	-	412	2	FSM	ENSG00000052723.12	ENST00000474562.1	412	2	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAAATTGAAATCTTGAG	-114771642	True	NA	-26	True	AATAAA	-10	NA	114780627	114779113	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_114779285_114780386
transcript_12539.known	chr1	-	3216	8	FSM	ENSG00000134198.10	ENST00000369516.7	3216	8	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	6.32132768281074	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTGTTTGATTTATCTT	-115088037	True	NA	3	True	ATTAAA	-18	NA	115089503	115048010	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_115050556_115053378_115053463_115057536_115057609_115058882_115058982_115060463_115060539_115062134_115062233_115072904_115073008_115089363
transcript_12544.known	chr1	-	671	7	FSM	ENSG00000134198.10	ENST00000433172.3	671	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	33.3087409282042	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTGTCAATTGTACATT	-115087948	True	NA	NA	False	NA	NA	NA	115089414	115050382	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_115050556_115057536_115057609_115058882_115058982_115060463_115060539_115062134_115062233_115072904_115073008_115089363
transcript_12547.known	chr1	-	1061	3	FSM	ENSG00000134259.6	ENST00000369512.3	1061	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTGCTGATGCTGGT	-115338037	True	NA	-1	True	ATTAAA	-13	NA	115338249	115285916	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_115286808_115293626_115293751_115338203
transcript_125494.known	chr20	+	663	3	FSM	ENSG00000101361.17	ENST00000470143.1	663	3	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_1	64.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGTATTTTTGGTAGA	2645935	True	NA	NA	False	NA	NA	NA	2652632	2653820	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_2652664_2652841_2652932_2653278
transcript_125495.known	chr20	+	2980	1	FSM	ENSG00000101361.17	ENST00000612233.1	2980	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGTTCATGTTCTTTAT	2655401	False	NA	13	True	AATAAA	-15	NA	2655412	2658392	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_2655400_2658400
transcript_125496.known	chr20	+	735	2	FSM	ENSG00000101361.17	ENST00000467857.1	735	2	0	0	0	0	multi-exon	FALSE	canonical	3	1150	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTCATGTTCTTTATT	2656667	False	NA	14	True	AATAAA	-16	NA	2656948	2658393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_2657219_2657928
transcript_125497.known	chr20	+	1094	6	FSM	ENSG00000101361.17	ENST00000466447.5	1094	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	381.236094828389	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTCATGTTCTTTATT	2655940	True	NA	14	True	AATAAA	-16	NA	2656110	2658393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_2656215_2656400_2656550_2656773_2656896_2657080_2657219_2657372_2657489_2657928
transcript_125498.nic	chr20	-	1434	13	NIC	ENSG00000101365.21	novel	1279	13	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	205.959593529087	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTGAATTTGTTTTTA	NA	False	NA	-5	True	AATAAA	-14	NA	2664223	2658394	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_2658523_2658637_2658838_2659524_2659586_2659698_2659794_2660029_2660177_2660262_2660366_2660456_2660591_2660696_2660830_2660908_2660970_2663445_2663567_2663659_2663759_2663924_2664006_2664152
transcript_12550.known	chr1	+	8671	8	FSM	ENSG00000173218.15	ENST00000355485.7	8671	8	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_4	15.9616888268153	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTTGTTTCTTTTCT	115639662	True	NA	12	True	AATAAA	-14	NA	115641969	115698221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_115642087_115651276_115651485_115659640_115659774_115663660_115664269_115682363_115682498_115683943_115684077_115685292_115685528_115691118
transcript_125501.known	chr20	-	1279	13	FSM	ENSG00000101365.21	ENST00000474315.5	1279	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	220.847609601432	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTGAATTTGTTTTTA	-2651959	True	NA	-5	True	AATAAA	-14	NA	2664189	2658394	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_2658523_2658758_2658838_2659524_2659586_2659698_2659794_2660029_2660177_2660262_2660366_2660456_2660591_2660696_2660830_2660908_2660970_2663445_2663567_2663659_2663759_2663924_2664006_2664152
transcript_125508.known	chr20	-	1230	12	FSM	ENSG00000101365.21	ENST00000380851.9	1230	12	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	184.563545911263	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTGAATTTGTTTTTA	-2651989	False	NA	-5	True	AATAAA	-14	NA	2664219	2658394	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_2658523_2659524_2659586_2659698_2659794_2660029_2660177_2660262_2660366_2660456_2660591_2660696_2660830_2660908_2660970_2663445_2663567_2663659_2663759_2663924_2664006_2664152
transcript_125510.known	chr20	-	1542	12	FSM	ENSG00000101365.21	ENST00000380843.9	1542	12	0	0	0	0	multi-exon	FALSE	canonical	3	621	junction_1	72.8308353550362	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTGAATTTGTTTTTA	-2651986	True	NA	-5	True	AATAAA	-14	NA	2664216	2658394	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_2658838_2659524_2659586_2659698_2659794_2660029_2660177_2660262_2660366_2660456_2660591_2660696_2660830_2660908_2660970_2663445_2663567_2663659_2663759_2663924_2664006_2664152
transcript_12554.known	chr1	+	2265	8	FSM	ENSG00000173218.15	ENST00000310260.7	2265	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	36.1956136704379	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGGGCAGTTCAGGAGATA	115640321	False	NA	-93	True	NA	NA	NA	115642628	115691854	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_115642707_115651276_115651485_115659640_115659774_115663660_115664269_115682363_115682498_115683943_115684077_115685292_115685528_115691118
transcript_125560.known	chr20	-	823	5	FSM	ENSG00000101365.21	ENST00000491065.1	823	5	0	0	0	0	multi-exon	FALSE	canonical	3	698	junction_4	67.3591122269289	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAAGGGGCGGGGCAAGG	-2651979	True	NA	NA	False	NA	NA	NA	2664209	2660504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_2660970_2663445_2663567_2663659_2663759_2663924_2664006_2664152
transcript_125562.known	chr20	-	677	6	FSM	ENSG00000101365.21	ENST00000466494.6	677	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	272.415564900393	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTGAATTTGTTTTTA	-2648078	False	NA	-5	True	AATAAA	-14	NA	2660308	2658394	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_2658523_2658637_2658838_2659524_2659586_2659698_2659794_2660029_2660177_2660262
transcript_125564.known	chr20	-	2376	14	FSM	ENSG00000088882.8	ENST00000380605.3	2376	14	0	0	0	0	multi-exon	TRUE	canonical	3	241	junction_6	37.6637254266987	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCATCTTCGTGTTGTCTC	-2794235	True	NA	-7	True	ATTAAA	-17	NA	2800627	2794073	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_2794432_2794536_2794640_2795276_2795417_2795598_2795897_2795981_2796162_2796246_2796444_2796526_2796651_2797005_2797095_2797191_2797343_2797967_2798059_2798151_2798292_2798427_2798538_2798725_2798894_2800400
transcript_125571.nic	chr20	-	2473	13	NIC	ENSG00000088882.8	novel	2376	14	NA	NA	-14	0	intron_retention	FALSE	canonical	3	248	junction_6	35.0344076904723	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCATCTTCGTGTTGTCTC	-2794249	True	NA	-7	True	ATTAAA	-17	NA	2800641	2794073	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_2794432_2794536_2794640_2795276_2795417_2795598_2795897_2795981_2796162_2796246_2796651_2797005_2797095_2797191_2797343_2797967_2798059_2798151_2798292_2798427_2798538_2798725_2798894_2800400
transcript_125579.nic	chr20	-	2561	12	NIC	ENSG00000088882.8	novel	2376	14	NA	NA	-17	0	intron_retention	FALSE	canonical	3	248	junction_5	36.3827222639929	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCATCTTCGTGTTGTCTC	-2794252	True	NA	-7	True	ATTAAA	-17	NA	2800644	2794073	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_2794432_2794536_2794640_2795276_2795417_2795598_2796162_2796246_2796651_2797005_2797095_2797191_2797343_2797967_2798059_2798151_2798292_2798427_2798538_2798725_2798894_2800400
transcript_125598.known	chr20	+	2708	24	FSM	ENSG00000215305.10	ENST00000380445.8	2708	24	0	0	0	0	multi-exon	TRUE	canonical	3	85	junction_10	18.074514951645	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTTGTCTTACACAGT	2839607	True	NA	22	True	AATAAA	-15	NA	2840744	2866732	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_2840828_2859718_2859808_2860053_2860152_2860238_2860368_2860448_2860594_2860747_2860864_2860969_2861093_2861224_2861281_2861614_2861705_2861804_2861900_2862053_2862131_2862578_2862711_2862806_2862935_2863064_2863101_2863289_2863399_2863948_2864084_2864178_2864288_2864364_2864463_2864546_2864655_2864977_2865056_2865147_2865318_2865398_2865496_2866211_2866316_2866429
transcript_12560.known	chr1	+	4705	12	FSM	ENSG00000163393.13	ENST00000369503.9	4705	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	5.56702214268904	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTTTTTTTTGTTCTCCC	115976414	True	NA	NA	False	AATAAA	-16	NA	115976512	116070054	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_115976715_115992030_115992244_116019581_116019715_116020720_116020886_116026892_116027023_116031365_116031582_116035186_116035328_116037302_116037389_116062761_116062883_116064435_116064509_116066519_116066709_116067018
transcript_125601.nic	chr20	+	2849	23	NIC	ENSG00000215305.10	novel	2708	24	NA	NA	-3	0	intron_retention	FALSE	canonical	3	85	junction_10	17.121346204892	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTTGTCTTACACAGT	2839562	True	NA	22	True	AATAAA	-15	NA	2840699	2866732	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_2840828_2859718_2859808_2860053_2860152_2860238_2860368_2860448_2860594_2860747_2860864_2860969_2861093_2861224_2861281_2861614_2861705_2861804_2861900_2862053_2862131_2862578_2862935_2863064_2863101_2863289_2863399_2863948_2864084_2864178_2864288_2864364_2864463_2864546_2864655_2864977_2865056_2865147_2865318_2865398_2865496_2866211_2866316_2866429
transcript_125602.nnic	chr20	+	2621	23	NIC	ENSG00000215305.10	novel	2708	24	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_11	28.6965097080026	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTTGTCTTACACAGT	2839562	True	NA	22	True	AATAAA	-15	NA	2840699	2866732	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_2840828_2859718_2859808_2860053_2860152_2860238_2860368_2860448_2860594_2860747_2860864_2860969_2861093_2861224_2861281_2861614_2861705_2861804_2861900_2862053_2862131_2862806_2862935_2863064_2863101_2863289_2863399_2863948_2864084_2864178_2864288_2864364_2864463_2864546_2864655_2864977_2865056_2865147_2865318_2865398_2865496_2866211_2866316_2866429
transcript_125609.nnic	chr20	+	2788	22	NNC	ENSG00000215305.10	novel	2708	24	NA	NA	-3	0	intron_retention	FALSE	canonical	2	10	junction_8	28.9158604251539	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTTGTCTTACACAGT	2839562	True	NA	22	True	AATAAA	-15	NA	2840699	2866732	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_2840828_2859718_2859808_2860053_2860152_2860238_2860368_2860448_2860594_2860747_2860864_2860969_2861093_2861224_2861281_2861775_2861900_2862053_2862131_2862578_2862935_2863064_2863101_2863289_2863399_2863948_2864084_2864178_2864288_2864364_2864463_2864546_2864655_2864977_2865056_2865147_2865318_2865398_2865496_2866211_2866316_2866429
transcript_125626.known	chr20	+	2318	20	FSM	ENSG00000215305.10	ENST00000380469.7	2318	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	30.6600518780291	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTTGTCTTACACAGT	2839565	True	NA	22	True	AATAAA	-15	NA	2840702	2866732	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_2840828_2859718_2859808_2860053_2860152_2860238_2860368_2860448_2860594_2860747_2860864_2860969_2861093_2861224_2861281_2861614_2861705_2863064_2863101_2863289_2863399_2863948_2864084_2864178_2864288_2864364_2864463_2864546_2864655_2864977_2865056_2865147_2865318_2865398_2865496_2866211_2866316_2866429
transcript_125634.nic	chr20	-	1860	8	NIC	ENSG00000132635.17	novel	1979	8	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	21.185285613619	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTGTGCAGTGGGTAT	-2840167	True	NA	-1	True	AATAAA	-25	NA	2840689	2835313	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_2835710_2836038_2836315_2838231_2838479_2838595_2838747_2838843_2838930_2839191_2839272_2839788_2839934_2840210
transcript_125638.known	chr20	-	1979	8	FSM	ENSG00000132635.17	ENST00000360652.7	1979	8	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_5	14.577029735799	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTGTGCAGTGGGTAT	-2840133	True	NA	-1	True	AATAAA	-25	NA	2840655	2835313	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_2835710_2836038_2836315_2838231_2838479_2838595_2838747_2838843_2839083_2839191_2839272_2839788_2839934_2840210
transcript_125640.nic	chr20	-	2122	7	NIC	ENSG00000132635.17	novel	1979	8	NA	NA	-18	0	intron_retention	FALSE	canonical	2	32	junction_3	14.3459247020035	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTGTGCAGTGGGTAT	-2840167	True	NA	-1	True	AATAAA	-25	NA	2840689	2835313	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_2835710_2836038_2836315_2838231_2838479_2838595_2838747_2838843_2839272_2839788_2839934_2840210
transcript_125647.known	chr20	+	3353	24	FSM	ENSG00000132670.21	ENST00000399903.7	3353	24	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	131.694080401719	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAATGTCTCTCCCTTTGT	2868253	True	NA	4	True	AATAAA	-17	NA	2873480	3038669	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_2873761_2923206_2923286_2947981_2948025_2964271_2964351_2964860_2965203_2975214_2975242_2986764_2986850_2988031_2988106_2988337_2988475_3005055_3005147_3007343_3007421_3015848_3015886_3017815_3017914_3021308_3021429_3022053_3022221_3022688_3022825_3024471_3024622_3026686_3026781_3027120_3027198_3027706_3027842_3035584_3035711_3035789_3035942_3037153_3037290_3038058
transcript_125649.known	chr20	+	3725	23	FSM	ENSG00000132670.21	ENST00000216877.10	3725	23	0	0	0	0	multi-exon	FALSE	canonical	3	383	junction_13	56.7276551560536	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTTGAATTGTTCCCAT	2868261	True	NA	NA	False	GATAAA	-19	NA	2873488	3039076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_2873761_2923206_2923286_2947981_2948025_2964271_2964351_2964860_2965203_2986764_2986850_2988031_2988106_2988337_2988475_3005055_3005147_3007343_3007421_3015848_3015886_3017815_3017914_3021308_3021429_3022053_3022221_3022688_3022825_3024471_3024622_3026686_3026781_3027120_3027198_3027706_3027842_3035584_3035711_3035789_3035942_3037153_3037290_3038058
transcript_125651.nnic	chr20	+	3335	23	NIC	ENSG00000132670.21	novel	3353	24	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	3	38	junction_4	149.378630354584	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAATGTCTCTCCCTTTGT	2868228	True	NA	4	True	AATAAA	-17	NA	2873455	3038669	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_2873761_2923206_2923286_2964271_2964351_2964860_2965203_2975214_2975242_2986764_2986850_2988031_2988106_2988337_2988475_3005055_3005147_3007343_3007421_3015848_3015886_3017815_3017914_3021308_3021429_3022053_3022221_3022688_3022825_3024471_3024622_3026686_3026781_3027120_3027198_3027706_3027842_3035584_3035711_3035789_3035942_3037153_3037290_3038058
transcript_125656.nnic	chr20	+	2998	22	NIC	ENSG00000132670.21	novel	3725	23	NA	NA	-25	-309	combination_of_known_splicesites	FALSE	canonical	3	119	junction_2	93.3087917199923	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCGTGAAATCCTCAGCCG	2868228	True	NA	28	True	ATTAAA	-21	NA	2873455	3038359	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_2873761_2923206_2923286_2964271_2964351_2964860_2965203_2986764_2986850_2988031_2988106_2988337_2988475_3005055_3005147_3007343_3007421_3015848_3015886_3017815_3017914_3021308_3021429_3022053_3022221_3022688_3022825_3024471_3024622_3026686_3026781_3027120_3027198_3027706_3027842_3035584_3035711_3035789_3035942_3037153_3037290_3038058
transcript_125658.nnic	chr20	+	2955	21	NIC	ENSG00000132670.21	novel	3353	24	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_13	165.916213794795	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAATGTCTCTCCCTTTGT	2868228	True	NA	4	True	AATAAA	-17	NA	2873455	3038669	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_2873761_2923206_2923286_2947981_2948025_2964271_2964351_2964860_2965203_2975214_2975242_2986764_2986850_2988031_2988106_2988337_2988475_3005055_3005147_3007343_3007421_3015848_3015886_3017815_3017914_3024471_3024622_3026686_3026781_3027120_3027198_3027706_3027842_3035584_3035711_3035789_3035942_3037153_3037290_3038058
transcript_125675.nic	chr20	+	1313	10	ISM	ENSG00000132670.21	ENST00000216877.10	3725	23	-33	31655	-25	2317	5prime_fragment	FALSE	canonical	3	398	junction_5	59.7688964901839	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGATCGGGTGCTTTCCC	2868228	True	NA	NA	False	NA	NA	NA	2873455	3007421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_2873761_2923206_2923286_2947981_2948025_2964271_2964351_2964860_2965203_2986764_2986850_2988031_2988106_2988337_2988475_3005055_3005147_3007343
transcript_125676.nic	chr20	+	1193	9	ISM	ENSG00000132670.21	ENST00000216877.10	3725	23	-33	33972	-25	0	5prime_fragment	FALSE	canonical	3	398	junction_5	60.307415588798	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGGAAAACAAGGAAAAAAAT	2868228	True	NA	NA	False	NA	NA	NA	2873455	3005104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_2873761_2923206_2923286_2947981_2948025_2964271_2964351_2964860_2965203_2986764_2986850_2988031_2988106_2988337_2988475_3005055
transcript_125680.known	chr20	+	733	7	FSM	ENSG00000132670.21	ENST00000430705.5	733	7	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	218.6455782514	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCCTACTAACACTTCA	2868455	False	NA	NA	False	NA	NA	NA	2873682	2986849	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_2873761_2923206_2923286_2947981_2948025_2964271_2964351_2964860_2965203_2975214_2975242_2986764
transcript_125683.known	chr20	+	1016	4	FSM	ENSG00000125901.6	ENST00000380325.4	1016	4	0	0	0	0	multi-exon	FALSE	canonical	3	1465	junction_3	70.6179077068196	1126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACACCCACTCATTGACT	3028829	True	NA	26	True	AATAAA	-17	NA	3046051	3048250	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3046281_3046372_3046520_3046613_3046738_3047734
transcript_125691.known	chr20	-	619	3	FSM	ENSG00000101200.5	ENST00000380293.3	619	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCTCGCGTCTGTCTCAG	NA	False	NA	NA	False	AATAAA	-15	NA	3084724	3082555	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_3082803_3082976_3083179_3084554
transcript_125692.nic	chr20	-	848	2	ISM	ENSG00000101200.5	ENST00000380293.3	619	3	1147	0	1147	0	3prime_fragment	FALSE	canonical	2	5	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCTCGCGTCTGTCTCAG	-3083499	True	NA	NA	False	AATAAA	-15	NA	3083577	3082555	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_3082803_3082976
transcript_125693.known	chr20	-	4300	5	FSM	ENSG00000185019.17	ENST00000217173.7	4300	5	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_1	18.8547076349648	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTCTGAAGGCAGTTT	-3154860	True	NA	0	True	AATAAA	-17	NA	3159865	3107572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_3110315_3115304_3115467_3121383_3122585_3123311_3123407_3159765
transcript_125694.known	chr20	-	4469	4	FSM	ENSG00000185019.17	ENST00000348031.6	4469	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	21.7613316585993	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTCTGAAGGCAGTTT	-3160164	False	NA	0	True	AATAAA	-17	NA	3160196	3107572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_3110315_3121383_3122585_3123311_3123407_3159765
transcript_125697.known	chr20	-	2842	2	FSM	ENSG00000215251.5	ENST00000380266.4	2842	2	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	0	238	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTGTTGGATTTTTCTT	-3154860	True	NA	-1	True	AATAAA	-29	NA	3159865	3146518	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_3149261_3159765
transcript_125698.known	chr20	-	4055	6	FSM	ENSG00000088899.16	ENST00000360342.7	4055	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	97.1378402065848	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGGCCTGCTTGTGTC	-3172490	True	NA	-3	True	AATAAA	-25	NA	3173546	3162616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_3165153_3165496_3165629_3165766_3166361_3166704_3167182_3167737_3167962_3173454
transcript_1257.nic	chr1	-	545	5	NIC	ENSG00000008128.23	novel	2429	20	NA	NA	-61	-193	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	28.6476438821764	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGGCATCATAGCCATTC	-1724402	False	NA	19	True	AAAAAG	-36	NA	1724418	1719358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_1719456_1721595_1721712_1722587_1722635_1722707_1722832_1724257
transcript_125700.nnic	chr20	-	4011	6	NNC	ENSG00000088899.16	novel	4055	6	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	104.898045739661	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGGCCTGCTTGTGTC	-3172507	True	NA	-3	True	AATAAA	-25	NA	3173563	3162616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_3165153_3165496_3165629_3165766_3166361_3166704_3167182_3167798_3167962_3173454
transcript_125706.known	chr20	-	4196	5	FSM	ENSG00000088899.16	ENST00000337576.7	4196	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	92.361720967076	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGGCCTGCTTGTGTC	-3172493	True	NA	-3	True	AATAAA	-25	NA	3173549	3162616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_3165153_3165496_3166361_3166704_3167182_3167737_3167962_3173454
transcript_125708.nnic	chr20	-	4227	5	NNC	ENSG00000088899.16	novel	4196	5	NA	NA	-70	0	intron_retention	FALSE	canonical	3	15	junction_3	100.095891524078	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGGCCTGCTTGTGTC	-3172563	True	NA	-3	True	AATAAA	-25	NA	3173619	3162616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_3165153_3165496_3166361_3166704_3167182_3167776_3167962_3173454
transcript_125710.nnic	chr20	-	4205	5	NNC	ENSG00000088899.16	novel	4196	5	NA	NA	-70	0	intron_retention	FALSE	canonical	0	0	junction_3	104.848700516506	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGGCCTGCTTGTGTC	-3172563	True	NA	-3	True	AATAAA	-25	NA	3173619	3162616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_3165153_3165496_3166361_3166704_3167182_3167798_3167962_3173454
transcript_125718.nnic	chr20	-	4058	5	NNC	ENSG00000088899.16	novel	4196	5	NA	NA	-70	-147	intron_retention	FALSE	canonical	0	0	junction_3	104.848700516506	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAACAGACTCAGCTTTG	-3172563	True	NA	NA	False	AATAGA	-7	NA	3173619	3162763	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_3165153_3165496_3166361_3166704_3167182_3167798_3167962_3173454
transcript_125724.nnic	chr20	-	4242	4	NNC	ENSG00000088899.16	novel	4196	5	NA	NA	206	0	intron_retention	FALSE	canonical	3	44	junction_3	91.4220979851152	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGGCCTGCTTGTGTC	-3167299	False	NA	-3	True	AATAAA	-25	NA	3168355	3162616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_3165153_3165496_3166361_3166704_3167182_3167990
transcript_125725.nnic	chr20	-	4029	4	NIC	ENSG00000088899.16	novel	4196	5	NA	NA	-57	0	intron_retention	FALSE	canonical	3	16	junction_3	104.59551721858	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGGCCTGCTTGTGTC	-3172550	True	NA	-3	True	AATAAA	-25	NA	3173606	3162616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_3165153_3165496_3166361_3166704_3167182_3173454
transcript_125730.nnic	chr20	-	4095	4	NNC	ENSG00000088899.16	novel	4196	5	NA	NA	206	-147	intron_retention	FALSE	canonical	3	44	junction_3	91.4220979851152	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAACAGACTCAGCTTTG	-3167299	False	NA	NA	False	AATAGA	-7	NA	3168355	3162763	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_3165153_3165496_3166361_3166704_3167182_3167990
transcript_125731.nnic	chr20	-	3882	4	NIC	ENSG00000088899.16	novel	4196	5	NA	NA	-57	-147	intron_retention	FALSE	canonical	3	16	junction_3	104.59551721858	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAACAGACTCAGCTTTG	-3172550	True	NA	NA	False	AATAGA	-7	NA	3173606	3162763	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_3165153_3165496_3166361_3166704_3167182_3173454
transcript_125742.known	chr20	-	1303	9	FSM	ENSG00000198171.13	ENST00000354488.8	1303	9	0	0	0	0	multi-exon	FALSE	canonical	3	468	junction_5	36.1731944953718	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTTTCTTTGTGCCCTG	-3194549	True	NA	-4	True	AAGAAA	-20	NA	3204682	3190349	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_3190820_3191189_3191239_3191764_3191822_3194829_3194869_3195230_3195354_3200000_3200103_3200341_3200455_3203212_3203417_3204536
transcript_125747.nnic	chr20	-	1898	9	NNC	ENSG00000198171.13	novel	1303	9	NA	NA	269	-3	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_8	171.172016915733	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCTTGGTGTGGCTTGGT	-3204303	False	NA	-4	True	ATTAAA	-17	NA	3204413	3190522	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_3190820_3191189_3191239_3191764_3191822_3194829_3194869_3195230_3195354_3200000_3200103_3200341_3200455_3203212_3203417_3203499
transcript_125760.known	chr20	+	1037	8	FSM	ENSG00000125877.13	ENST00000380113.8	1037	8	0	0	0	0	multi-exon	FALSE	canonical	3	536	junction_2	95.8208362156229	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCCCAGGCAGGTGTC	3203319	True	NA	24	True	AATAAA	-21	NA	3209497	3223860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3209618_3213168_3213227_3213318_3213384_3213984_3214059_3215280_3215313_3218516_3218633_3221840_3221918_3223365
transcript_125765.known	chr20	+	729	8	FSM	ENSG00000125877.13	ENST00000455664.6	729	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	239.606650447719	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCTGCTCTGAGAAACTC	3203334	True	NA	NA	False	NA	NA	NA	3209512	3223618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3209567_3213168_3213227_3213318_3213384_3213984_3214059_3215280_3215313_3218516_3218633_3221840_3221918_3223365
transcript_125766.known	chr20	+	1028	7	FSM	ENSG00000125877.13	ENST00000483354.5	1028	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	344.26415084286	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGTGTCTGTCTCAGTC	3208790	True	NA	34	True	AATAAA	-31	NA	3208867	3223870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3209034_3213168_3213227_3213984_3214059_3215280_3215313_3218516_3218633_3221840_3221918_3223365
transcript_125768.known	chr20	+	967	7	FSM	ENSG00000125877.13	ENST00000460550.5	967	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	265.374839718379	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGTGTCTGTCTCAGTC	3203334	True	NA	34	True	AATAAA	-31	NA	3209512	3223870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3209618_3213168_3213227_3213984_3214059_3215280_3215313_3218516_3218633_3221840_3221918_3223365
transcript_125774.known	chr20	+	977	7	FSM	ENSG00000125877.13	ENST00000490838.6	977	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	270.900607029384	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGTGTCTGTCTCAGTC	3203310	True	NA	34	True	AATAAA	-31	NA	3209488	3223870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3209536_3213257_3213384_3213984_3214059_3215280_3215313_3218516_3218633_3221840_3221918_3223365
transcript_125781.known	chr20	+	897	6	FSM	ENSG00000125877.13	ENST00000399838.3	897	6	0	0	0	0	multi-exon	TRUE	canonical	3	140	junction_1	241.43852219561	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGTGTCTGTCTCAGTC	3203346	True	NA	34	True	AATAAA	-31	NA	3209524	3223870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3209618_3213984_3214059_3215280_3215313_3218516_3218633_3221840_3221918_3223365
transcript_125784.known	chr20	+	924	5	FSM	ENSG00000125877.13	ENST00000609835.5	924	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	292.446148888988	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGACTTCTCTAACCTCA	3203322	True	NA	NA	False	NA	NA	NA	3209500	3219091	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3209618_3213257_3213384_3213984_3214059_3215280_3215313_3218516
transcript_125791.nic	chr20	-	2995	20	NIC	ENSG00000088836.14	novel	3046	20	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_2	33.3054361563143	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTATGTGCCACCTGTGTC	-3238280	True	NA	-10	True	AATAAA	-17	NA	3239211	3227421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_3227857_3228258_3228357_3228511_3228708_3228837_3229012_3229094_3229264_3229345_3229453_3229523_3229777_3230186_3230261_3230514_3230648_3230731_3230846_3230932_3231059_3231148_3231243_3231329_3231549_3233513_3233638_3233920_3234003_3234082_3234315_3234567_3234618_3234741_3234895_3237543_3237589_3239094
transcript_125799.known	chr20	-	3229	20	FSM	ENSG00000088836.14	ENST00000380059.7	3229	20	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_19	32.9010941225339	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCACCTGTGTCCCTGC	-3238149	False	931	-5	True	AATAAA	-22	NA	3238166	3227416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_3227857_3228258_3228429_3228511_3228708_3228837_3229012_3229094_3229264_3229345_3229453_3229523_3229777_3230186_3230261_3230514_3230648_3230731_3230846_3230932_3231059_3231148_3231243_3231329_3231549_3233513_3233638_3233920_3234003_3234082_3234315_3234567_3234618_3234741_3234895_3237543_3237589_3237892
transcript_125802.known	chr20	-	3046	20	FSM	ENSG00000088836.14	ENST00000642402.1	3046	20	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_19	24.3187512436363	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTATGTGCCACCTGTGTC	-3238259	True	NA	-10	True	AATAAA	-17	NA	3239190	3227421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_3227857_3228258_3228429_3228511_3228708_3228837_3229012_3229094_3229264_3229345_3229453_3229523_3229777_3230186_3230261_3230514_3230648_3230731_3230846_3230932_3231059_3231148_3231243_3231329_3231549_3233513_3233638_3233920_3234003_3234082_3234315_3234567_3234618_3234741_3234895_3237543_3237589_3239094
transcript_125804.nic	chr20	-	3248	20	NIC	ENSG00000088836.14	novel	3046	20	NA	NA	-86	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_19	33.7349946123583	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTATGTGCCACCTGTGTC	NA	False	NA	-10	True	AATAAA	-17	NA	3239645	3227421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_3227857_3228258_3228429_3228511_3228708_3228837_3229012_3229094_3229264_3229345_3229453_3229523_3229777_3230186_3230261_3230514_3230648_3230731_3230846_3230932_3231059_3231148_3231243_3231329_3231549_3233513_3233638_3233920_3234003_3234082_3234315_3234567_3234618_3234741_3234895_3237543_3237589_3239347
transcript_125820.known	chr20	-	2915	19	FSM	ENSG00000088836.14	ENST00000647296.1	2915	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	35.6670560726406	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCCTGTTTCTAGGCTCC	-3238259	True	NA	-27	True	NA	NA	NA	3239190	3227438	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_3227857_3228258_3228429_3228511_3228708_3228837_3229012_3229094_3229264_3229345_3229453_3229523_3229777_3230186_3230261_3230514_3230648_3230932_3231059_3231148_3231243_3231329_3231549_3233513_3233638_3233920_3234003_3234082_3234315_3234567_3234618_3234741_3234895_3237543_3237589_3239094
transcript_125836.known	chr20	-	6912	37	FSM	ENSG00000088854.13	ENST00000252032.10	6912	37	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_20	4.56528432714265	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGGCCTCCAGACGATGC	-3406926	True	NA	-11	True	AATAAA	-15	NA	3407669	3249305	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_3252685_3253725_3253820_3255218_3255285_3256005_3256212_3259479_3259555_3259921_3260029_3264437_3264525_3270426_3270563_3278911_3278950_3281640_3281767_3287631_3287791_3290128_3290218_3294138_3294257_3294527_3294630_3296860_3296950_3298028_3298176_3304439_3304544_3315032_3315121_3315734_3315786_3316722_3316794_3318288_3318401_3322216_3322263_3322651_3322697_3324891_3324969_3326196_3326285_3330645_3330683_3332279_3332362_3340503_3340640_3343675_3343732_3348524_3348624_3359515_3359594_3374047_3374155_3375029_3375127_3376177_3376303_3381378_3381499_3382426_3382507_3407474
transcript_125838.nic	chr20	-	2548	25	ISM	ENSG00000088854.13	ENST00000252032.10	6912	37	-25	44660	-25	1528	5prime_fragment	FALSE	canonical	3	8	junction_8	4.08928138212843	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGTGTCAGGTGTCTAC	-3407588	False	NA	NA	False	NA	NA	NA	3407694	3293965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_3294257_3294527_3294630_3296860_3296950_3298028_3298176_3304439_3304544_3315032_3315121_3315734_3315786_3316722_3316794_3318288_3318401_3322216_3322263_3322651_3322697_3324891_3324969_3326196_3326285_3330645_3330683_3332279_3332362_3340503_3340640_3343675_3343732_3348524_3348624_3359515_3359594_3374047_3374155_3375029_3375127_3376177_3376303_3381378_3381499_3382426_3382507_3407474
transcript_125841.known	chr20	+	3921	25	FSM	ENSG00000088812.18	ENST00000446916.2	3921	25	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	10.2740233382816	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGAGTTAATGGGTGCAGCA	3469908	True	NA	NA	False	NA	NA	NA	3471107	3615947	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3471518_3535252_3535337_3540221_3540336_3545761_3545891_3547283_3547490_3549169_3549339_3559392_3559484_3560661_3560906_3562275_3562460_3563208_3563364_3565347_3565433_3572730_3572952_3575826_3575949_3576858_3576998_3578581_3578773_3582134_3582355_3583897_3584084_3584646_3584881_3591168_3591307_3594478_3594573_3596376_3596430_3597905_3598001_3600945_3601025_3604104_3604263_3615827
transcript_125863.known	chr20	+	3133	13	FSM	ENSG00000132622.11	ENST00000254963.7	3133	13	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_12	5.60257877132387	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGCCTGCTGATATGG	3732157	True	NA	11	True	AATAAA	-21	NA	3732684	3753111	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3732795_3738657_3738718_3740814_3740913_3742283_3742409_3744901_3745089_3745492_3745598_3745914_3746032_3748216_3748392_3749231_3749319_3749749_3749855_3749968_3750228_3750803_3750908_3751510
transcript_125865.nic	chr20	+	3799	12	ISM	ENSG00000132622.11	ENST00000254963.7	3133	13	-69	6	-69	-6	intron_retention	FALSE	canonical	3	32	junction_3	4.79152143749252	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGAAGCCACAGCCTGCTG	NA	False	NA	5	True	AATAAA	-15	NA	3732615	3753105	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_3732795_3738657_3738718_3740814_3740913_3742283_3742409_3744901_3745089_3745492_3745598_3745914_3746032_3748216_3748392_3749231_3749319_3749749_3749855_3749968_3750228_3750803
transcript_125866.known	chr20	+	3009	12	FSM	ENSG00000132622.11	ENST00000399701.1	3009	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	11.1035695250828	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGCCTGCTGATATGG	3732183	True	NA	11	True	AATAAA	-21	NA	3732710	3753111	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3732795_3738657_3738718_3742283_3742409_3744901_3745089_3745492_3745598_3745914_3746032_3748216_3748392_3749231_3749319_3749749_3749855_3749968_3750228_3750803_3750908_3751510
transcript_125868.nic	chr20	+	2725	8	ISM	ENSG00000132622.11	ENST00000399701.1	3009	12	12610	0	12610	0	3prime_fragment	FALSE	canonical	3	26	junction_7	6.6332495807108	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGCCTGCTGATATGG	3745184	True	NA	11	True	AATAAA	-21	NA	3745320	3753111	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_3745598_3745914_3746032_3748216_3748392_3749231_3749319_3749749_3749855_3749968_3750228_3750803_3750908_3751510
transcript_125869.nic	chr20	+	3322	7	ISM	ENSG00000132622.11	ENST00000399701.1	3009	12	12610	6	12610	-6	intron_retention	FALSE	canonical	3	32	junction_2	4.83045891539648	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGAAGCCACAGCCTGCTG	3745184	True	NA	5	True	AATAAA	-15	NA	3745320	3753105	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_3745598_3745914_3746032_3748216_3748392_3749231_3749319_3749749_3749855_3749968_3750228_3750803
transcript_125876.known	chr20	-	1302	6	FSM	ENSG00000101220.18	ENST00000217195.12	1302	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	460.515189760338	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGGTGGATTTTTGTTC	-3743507	True	NA	-4	True	AATAAA	-19	NA	3767728	3753507	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_3754159_3754396_3754520_3755468_3755608_3758535_3758679_3760006_3760187_3767662
transcript_125877.known	chr20	-	1252	6	FSM	ENSG00000101220.18	ENST00000379772.4	1252	6	0	0	0	0	multi-exon	FALSE	canonical	3	1125	junction_5	54.5615249053763	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGGTGGATTTTTGTTC	-3743532	True	NA	-4	True	AATAAA	-19	NA	3767753	3753507	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_3754159_3754396_3754520_3755468_3755608_3758535_3758679_3760081_3760187_3767662
transcript_12588.known	chr1	+	3670	23	FSM	ENSG00000163399.16	ENST00000295598.10	3670	23	0	0	0	0	multi-exon	FALSE	canonical	3	1827	junction_6	234.341582466124	3945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTGTGCCCTCGTCGC	116344944	True	NA	23	True	AATAAA	-20	NA	116373243	116404774	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_116373524_116384013_116384125_116384782_116384843_116387287_116387492_116388130_116388245_116388637_116388773_116388901_116389020_116389438_116389708_116390212_116390412_116390781_116390892_116392853_116392989_116393530_116393724_116395109_116395286_116396597_116396735_116397887_116398039_116398620_116398790_116398929_116399085_116399419_116399544_116400860_116401007_116401129_116401261_116401553_116401656_116403883_116403976_116404415
transcript_125889.nic	chr20	-	2488	4	NIC	ENSG00000101220.18	novel	1252	6	NA	NA	-24	-3	intron_retention	FALSE	canonical	3	1125	junction_3	62.4624331543013	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGCCAGGTGGATTTTTG	-3743584	True	NA	-7	True	AATAAA	-16	NA	3767805	3753510	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_3755608_3758535_3758679_3760081_3760187_3767662
transcript_125891.known	chr20	-	1580	7	FSM	ENSG00000101222.12	ENST00000379756.3	1580	7	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	1.34370962471643	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGTGCCTGCCTTCTC	-3777454	False	NA	0	True	ATTAAA	-18	NA	3781448	3777503	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_3778320_3778420_3778545_3778745_3778807_3778950_3778991_3779195_3779353_3779663_3779776_3781178
transcript_125893.known	chr20	+	3071	16	FSM	ENSG00000101224.18	ENST00000344256.10	3071	16	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	26.2175513730783	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCCTGTGGGGCCCTG	NA	False	NA	36	True	AATAAA	-27	NA	3786771	3806121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3787140_3797621_3797750_3798411_3798464_3800287_3800330_3800461_3800499_3800742_3800866_3800970_3801094_3801253_3801389_3801721_3801803_3801923_3802101_3802280_3802377_3802909_3802973_3803107_3803207_3803403_3803538_3804568_3804681_3804820
transcript_125894.known	chr20	+	1960	16	FSM	ENSG00000101224.18	ENST00000467519.5	1960	16	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	22.3620710629007	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCTTGTTTCCTTGTTA	3795710	False	NA	21	True	NA	NA	NA	3795738	3805237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3795880_3797621_3797750_3798411_3798464_3800287_3800330_3800461_3800499_3800742_3800866_3800970_3801094_3801253_3801389_3801721_3801803_3801923_3802101_3802280_3802377_3802909_3802973_3803107_3803207_3803403_3803538_3804568_3804681_3804820
transcript_125896.known	chr20	+	3119	16	FSM	ENSG00000101224.18	ENST00000245960.10	3119	16	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	21.0328843058251	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCATTGTGTCCTGTGGG	3795937	True	NA	30	True	AATAAA	-21	NA	3796309	3806115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3796732_3797621_3797750_3798411_3798464_3800287_3800330_3800461_3800499_3800742_3800866_3800970_3801094_3801253_3801389_3801721_3801803_3801923_3802101_3802280_3802377_3802909_3802973_3803107_3803207_3803403_3803538_3804568_3804681_3804820
transcript_125897.known	chr20	+	3096	16	FSM	ENSG00000101224.18	ENST00000439880.6	3096	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	26.8521879927875	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCATTGTGTCCTGTGGG	3795762	False	NA	30	True	AATAAA	-21	NA	3796290	3806115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3796732_3797663_3797750_3798411_3798464_3800287_3800330_3800461_3800499_3800742_3800866_3800970_3801094_3801253_3801389_3801721_3801803_3801923_3802101_3802280_3802377_3802909_3802973_3803107_3803207_3803403_3803538_3804568_3804681_3804820
transcript_125900.known	chr20	+	1978	15	FSM	ENSG00000101224.18	ENST00000340833.4	1978	15	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_5	30.4289906074414	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTTGTGTCCTCCAGGA	3796275	True	NA	2	True	NA	NA	NA	3796430	3805218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3796732_3797621_3797750_3798411_3798464_3800287_3800330_3800461_3800499_3800970_3801094_3801253_3801389_3801721_3801803_3801923_3802101_3802280_3802377_3802909_3802973_3803107_3803207_3803403_3803538_3804568_3804681_3804820
transcript_125903.nnic	chr20	+	2771	14	NNC	ENSG00000101224.18	novel	807	9	NA	NA	-1379	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	25.1793566240283	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCATTGTGTCCTGTGGG	3799490	True	NA	30	True	AATAAA	-21	NA	3799691	3806115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_3799946_3800287_3800330_3800461_3800499_3800742_3800866_3800970_3801094_3801253_3801389_3801721_3801803_3801923_3802101_3802280_3802377_3802909_3802973_3803107_3803207_3803403_3803538_3804568_3804681_3804820
transcript_125907.known	chr20	+	5372	3	FSM	ENSG00000125843.11	ENST00000615891.2	5372	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	4	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTACAGGTTTTTGTG	3820259	True	NA	NA	False	AATACA	-14	NA	3820546	3828838	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3820759_3822101_3822294_3823870
transcript_125909.known	chr20	+	1791	3	FSM	ENSG00000125843.11	ENST00000379567.6	1791	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	4	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTTTCTGTGAGTTTGA	3820248	True	NA	9	True	ATTAAA	-22	NA	3820535	3825302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3820703_3822101_3822294_3823870
transcript_125911.known	chr20	+	584	3	FSM	ENSG00000125843.11	ENST00000455742.5	584	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCGCTGCACGAGGCCC	3820259	True	NA	NA	False	NA	NA	NA	3820546	3823954	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3820855_3822101_3822294_3823870
transcript_125916.nnic	chr20	+	5213	8	NNC	ENSG00000088888.18	novel	11731	7	NA	NA	8	-5442	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	27.3548115381136	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGGAGATGCTCTTTACC	NA	False	NA	NA	False	NA	NA	NA	3846806	3870676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_3846904_3854557_3854742_3857634_3857810_3861331_3861505_3862253_3862414_3864255_3864789_3865682_3868348_3869450
transcript_125918.known	chr20	+	11731	7	FSM	ENSG00000088888.18	ENST00000428216.4	11731	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	11.2051575426477	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACAGTTATAATGGTCTAC	3844180	True	NA	12	True	AATAAA	-23	NA	3846833	3876118	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3846904_3854557_3854742_3857634_3857810_3861331_3861505_3862253_3862414_3864255_3864789_3865682
transcript_125925.known	chr20	+	11596	6	FSM	ENSG00000088888.18	ENST00000416600.6	11596	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	27.4619737091128	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATAATGGTCTACAATGG	NA	False	NA	17	True	AATAAA	-28	NA	3846798	3876123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3846904_3854557_3854742_3861331_3861505_3862253_3862414_3864255_3864789_3865682
transcript_12593.known	chr1	+	3763	23	FSM	ENSG00000163399.16	ENST00000537345.5	3763	23	0	0	0	0	multi-exon	FALSE	canonical	2	27	junction_1	511.689837371646	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGTCTGTGCCCTCGTC	116373855	False	NA	21	True	AATAAA	-18	NA	116373866	116404772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_116374242_116384013_116384125_116384782_116384843_116387287_116387492_116388130_116388245_116388637_116388773_116388901_116389020_116389438_116389708_116390212_116390412_116390781_116390892_116392853_116392989_116393530_116393724_116395109_116395286_116396597_116396735_116397887_116398039_116398620_116398790_116398929_116399085_116399419_116399544_116400860_116401007_116401129_116401261_116401553_116401656_116403883_116403976_116404415
transcript_125949.known	chr20	+	4815	7	FSM	ENSG00000125779.24	ENST00000497424.5	4815	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	129.931605940288	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCGCTATTTCAGGTCA	3888691	True	NA	NA	False	NA	NA	NA	3888838	3926958	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3888905_3907925_3908279_3910576_3910831_3912457_3912635_3916926_3917051_3918670_3918797_3923243
transcript_125951.known	chr20	+	1843	7	FSM	ENSG00000125779.24	ENST00000336066.8	1843	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	124.27176759917	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCACGTTACTTTACACT	3880999	True	NA	-25	True	NA	NA	NA	3889388	3923855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3889729_3907925_3908136_3910576_3910831_3912457_3912635_3916926_3917051_3918670_3918797_3923243
transcript_125956.known	chr20	+	8020	7	FSM	ENSG00000125779.24	ENST00000610179.7	8020	7	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_2	77.0203796984207	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGAGTGTGATTGCAAAAA	3880997	True	NA	10	True	AATAAA	-22	NA	3889386	3929887	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3889729_3907925_3908279_3910576_3910831_3912457_3912635_3916926_3917051_3918670_3918797_3923243
transcript_125968.nic	chr20	+	1506	7	NIC	ENSG00000125779.24	novel	1763	7	NA	NA	-39	71	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	152.336250883804	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTCTTGGCAATCATCT	3881387	False	NA	110	True	NA	NA	NA	3889776	3923702	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_3889933_3907925_3908136_3910576_3910831_3912457_3912635_3916926_3917051_3918670_3918797_3923243
transcript_125970.known	chr20	+	1763	7	FSM	ENSG00000125779.24	ENST00000621507.1	1763	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	125.755052913723	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCACGTTACTTTACACT	3889602	True	NA	-25	True	NA	NA	NA	3889815	3923855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_3889933_3907925_3908279_3910576_3910831_3912457_3912635_3916926_3917051_3918670_3918797_3923243
transcript_125972.known	chr20	-	1128	7	FSM	ENSG00000101236.17	ENST00000545616.2	1128	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	30.3063066410644	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTATGCCTTTGATAAG	-4014091	True	NA	3	True	NA	NA	NA	4015545	3933566	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_3934202_3934993_3935074_3945176_3945219_3948236_3948280_3963874_3964025_3974331_3974401_4015436
transcript_125983.known	chr20	-	7453	6	FSM	ENSG00000101236.17	ENST00000336095.10	7453	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	33.9611542795589	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTGCATATGCCTTTG	-4013935	False	NA	0	True	AATAAA	-19	NA	4015389	3927308	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_3934202_3934993_3935074_3945176_3945219_3948236_3948280_3963874_3964025_4015144
transcript_125984.known	chr20	-	7328	6	FSM	ENSG00000101236.17	ENST00000358395.11	7328	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_5	9.40212741883453	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTTGTGCATATGCCTT	-4014104	True	NA	-2	True	AATAAA	-17	NA	4015558	3927310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_3934202_3934993_3935074_3945176_3945219_3948236_3948280_3963874_3964025_4015436
transcript_125991.nic	chr20	+	2064	5	ISM	ENSG00000125779.24	ENST00000610179.7	8020	7	-54	12077	-54	760	5prime_fragment	FALSE	canonical	3	132	junction_2	92.3156947652998	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTCTTTTTTCTTTATT	3880943	True	NA	NA	False	ATTAAA	-18	NA	3889332	3917810	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_3889729_3907925_3908279_3910576_3910831_3912457_3912635_3916926
transcript_125995.nic	chr20	+	1096	2	ISM	ENSG00000125779.24	ENST00000336066.8	1843	7	-56	15230	-54	-2191	5prime_fragment	FALSE	canonical	3	311	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTCAGTCTTGTCTAC	3880943	True	NA	NA	False	ATTAAA	-20	NA	3889332	3908625	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_3889729_3907925
transcript_125997.known	chr20	+	2164	9	FSM	ENSG00000088826.18	ENST00000278795.7	2164	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	28.6520069105115	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGTGTATGTGTGTGT	4148205	True	NA	42	True	AATAAA	-45	NA	4148778	4187747	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_4148978_4175029_4175264_4177350_4177578_4181802_4181977_4182088_4182324_4182482_4182849_4183493_4183655_4186742_4186833_4187269
transcript_126.known	SIRV4	-	617	2	FSM	SIRV4B	SIRV406	617	2	0	0	0	0	multi-exon	FALSE	canonical	3	2881	junction_1	0	673	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATTTAAAAATAGCCTGT	NA	False	NA	NA	False	NA	NA	NA	5158	3637	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV4_-_4104_5007
transcript_126000.known	chr20	+	2074	8	FSM	ENSG00000088826.18	ENST00000339123.10	2074	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	21.0964742193997	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGTGTATGTGTGTGT	4148205	True	NA	42	True	AATAAA	-45	NA	4148778	4187747	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_4148978_4175029_4175264_4177350_4177578_4181802_4181977_4182088_4182324_4182482_4182849_4183493_4183655_4187269
transcript_126003.known	chr20	+	2322	8	FSM	ENSG00000088826.18	ENST00000621355.4	2322	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	27.5266105017361	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTGTGTATGTGTGTG	4148205	True	NA	41	True	AATAAA	-44	NA	4148778	4187746	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_4148978_4175029_4175264_4177350_4177578_4181802_4181977_4182088_4182849_4183493_4183655_4186742_4186833_4187269
transcript_126005.known	chr20	+	2164	7	FSM	ENSG00000088826.18	ENST00000305958.9	2164	7	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	7.6029964853047	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTCTCTGGTTTTCTCA	4148254	True	NA	22	True	AATAAA	-25	NA	4148827	4187727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_4148978_4175029_4175264_4177350_4177578_4181802_4181977_4182088_4182849_4183493_4183655_4187269
transcript_126011.nic	chr20	+	2322	6	NIC	ENSG00000088826.18	novel	2164	7	NA	NA	3	0	intron_retention	FALSE	canonical	3	58	junction_1	6.67532770731145	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTCTCTGGTTTTCTCA	4148208	True	NA	22	True	AATAAA	-25	NA	4148781	4187727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_4148978_4175029_4175264_4177350_4177578_4181802_4182849_4183493_4183655_4187269
transcript_126012.known	chr20	+	2429	2	FSM	ENSG00000171867.18	ENST00000424424.2	2429	2	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTGTCTGCAGTTGTAT	4684342	True	NA	16	True	ATTAAA	-22	NA	4686458	4701590	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_4686513_4699215
transcript_126013.known	chr20	+	2435	2	FSM	ENSG00000171867.18	ENST00000379440.9	2435	2	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCGTGTCTGCAGTTGT	4684339	True	NA	14	True	ATTAAA	-20	NA	4686455	4701588	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_4686513_4699210
transcript_126014.known	chr20	+	2574	2	FSM	ENSG00000171867.18	ENST00000457586.2	2574	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTGTCTGCAGTTGTAT	4684426	False	NA	16	True	ATTAAA	-22	NA	4686542	4701590	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_4686737_4699210
transcript_126015.known	chr20	+	2539	2	FSM	ENSG00000171867.18	ENST00000430350.2	2539	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTGTCTGCAGTTGTAT	4686214	False	NA	16	True	ATTAAA	-22	NA	4686349	4701590	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_4686509_4699210
transcript_126016.known	chr20	+	397	1	FSM	ENSG00000278595.1	ENST00000617466.1	397	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCATTCTGAGCAGCGTGA	4761288	False	NA	NA	False	AATAAA	-22	NA	4761299	4761696	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_4761300_4761700
transcript_126019.nnic	chr20	-	5578	12	NNC	ENSG00000101265.16	novel	5390	12	NA	NA	51	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	15.7946533478948	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTGCCCCGTGGATGGG	-4823547	False	NA	-14	True	AATAAA	-14	NA	4823557	4780025	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_4784343_4786230_4786329_4787632_4787755_4788216_4788269_4789595_4789698_4790450_4790612_4792538_4792628_4795814_4795967_4798009_4798086_4800971_4801063_4822328_4822404_4823314
transcript_126020.known	chr20	-	5390	12	FSM	ENSG00000101265.16	ENST00000379400.8	5390	12	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_11	6	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCCCGTGGATGGGTCT	-4823598	False	403	-11	True	AATAAA	-17	NA	4823608	4780022	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_4784343_4786230_4786329_4787632_4787755_4788216_4788269_4789595_4789698_4790450_4790612_4792538_4792628_4795814_4795967_4798009_4798086_4800971_4801063_4822328_4822404_4823556
transcript_126027.known	chr20	-	6953	17	FSM	ENSG00000089057.15	ENST00000338244.6	6953	17	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_16	9.15640998153752	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGCTCTTCACGTGCCT	-4999581	True	NA	-3	True	AATAAA	-17	NA	5001510	4852357	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_4857205_4859288_4859385_4861947_4862086_4862777_4862908_4867769_4867876_4869905_4870054_4873935_4874093_4874575_4874697_4883641_4883824_4884752_4884824_4885820_4885910_4899554_4899713_4902441_4902559_4912879_4912979_4932454_4932717_4970792_4970920_5001405
transcript_126042.known	chr20	-	1541	5	FSM	ENSG00000089063.15	ENST00000342308.10	1541	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	609.018267377917	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCAGAAAACATTTTAATG	-5101471	False	11605	-20	True	AATAAA	-19	NA	5113076	5099849	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_5100932_5106187_5106311_5109331_5109446_5111499_5111606_5112960
transcript_126047.nnic	chr20	-	1378	4	NNC	ENSG00000089063.15	novel	1541	5	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_2	501.645957490606	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCAGAAAACATTTTAATG	-5101502	False	NA	-20	True	AATAAA	-19	NA	5113107	5099849	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_5100932_5106187_5106223_5109331_5109446_5112960
transcript_126048.known	chr20	-	1642	4	FSM	ENSG00000089063.15	ENST00000379299.6	1642	4	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_3	513.151266413932	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTAATGATTTTATGAT	-5101437	False	11605	-10	True	AATAAA	-29	NA	5113042	5099839	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_5100932_5106187_5106311_5109331_5109446_5112729
transcript_126049.known	chr20	-	1636	4	FSM	ENSG00000089063.15	ENST00000379279.6	1636	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	562.646326646579	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTAATGATTTTATGAT	-5101444	False	11605	-10	True	AATAAA	-29	NA	5113049	5099839	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_5100932_5106187_5106311_5109331_5109446_5112742
transcript_126050.known	chr20	-	1472	4	FSM	ENSG00000089063.15	ENST00000202834.11	1472	4	0	0	0	0	multi-exon	FALSE	canonical	3	1001	junction_3	109.259121154966	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTAATGATTTTATGAT	-5101498	False	11605	-10	True	AATAAA	-29	NA	5113103	5099839	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_5100932_5106187_5106311_5109331_5109446_5112960
transcript_126052.known	chr20	-	1735	5	FSM	ENSG00000089063.15	ENST00000379286.6	1735	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	613.034460695318	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTAATGATTTTATGAT	-5101437	False	11605	-10	True	AATAAA	-29	NA	5113042	5099839	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_5100932_5106187_5106311_5109331_5109446_5111499_5111606_5112742
transcript_126053.known	chr20	-	1359	7	FSM	ENSG00000132646.11	ENST00000379160.3	1359	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_6	425.664741577479	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGCAGTGTCTTCATTTT	-5126321	True	NA	-2	True	AATAAA	-23	NA	5126626	5114952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_5115363_5115448_5115573_5117469_5117665_5118609_5118678_5118768_5118867_5119577_5119915_5126499
transcript_126054.known	chr20	-	1276	6	FSM	ENSG00000132646.11	ENST00000379143.10	1276	6	0	0	0	0	multi-exon	FALSE	canonical	3	1022	junction_5	115.475711731948	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGCAGTGTCTTCATTTT	-5108353	True	NA	-2	True	AATAAA	-23	NA	5119958	5114952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_5115363_5115448_5115573_5117469_5117665_5118609_5118678_5118768_5118867_5119577
transcript_126065.known	chr20	+	9076	13	FSM	ENSG00000101290.14	ENST00000460006.6	9076	13	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_2	20.2601140722905	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCATGTGTGGTTTTCGAT	5125541	True	NA	NA	False	AATAAA	-17	NA	5127007	5197887	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_5127150_5173522_5173660_5175182_5175280_5176647_5176746_5178816_5178957_5182386_5182446_5183060_5183144_5184857_5184946_5185757_5185827_5186686_5186840_5189066_5189187_5189734_5189839_5190101
transcript_126078.known	chr20	+	2706	11	FSM	ENSG00000101290.14	ENST00000468817.5	2706	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	104.919969500567	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	5125542	True	NA	NA	False	NA	NA	NA	5127008	5187879	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_5127150_5128149_5128751_5173522_5173660_5175182_5175280_5176647_5176746_5178816_5178957_5182386_5182446_5183060_5183144_5184857_5184946_5185757_5185827_5186686
transcript_126088.known	chr20	-	4446	3	FSM	ENSG00000101292.8	ENST00000678254.1	4446	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACAGGTTTCAAGTGCTT	-5316910	True	NA	NA	False	ATTAAA	-45	NA	5316954	5299217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_5302737_5313911_5314378_5316493
transcript_126094.known	chr20	-	5434	20	FSM	ENSG00000125772.14	ENST00000379019.7	5434	20	0	0	0	0	multi-exon	TRUE	canonical	3	45	junction_3	13.0770145770855	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAGTTTCCTAACTCAGA	-5609767	True	NA	-11	True	AATAAA	-16	NA	5611006	5544438	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_5547851_5557944_5558106_5558683_5558820_5559939_5560077_5561464_5561531_5565016_5565079_5566732_5566773_5567482_5567561_5570146_5570240_5573914_5573970_5575412_5575546_5575815_5575979_5578379_5578612_5580007_5580132_5584280_5584323_5586193_5586270_5593326_5593412_5598724_5598822_5604363_5604441_5610841
transcript_126099.nic	chr20	-	2169	19	ISM	ENSG00000125772.14	ENST00000379019.7	5434	20	-53	13412	-53	960	5prime_fragment	FALSE	canonical	3	45	junction_2	13.4039795085887	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCAGTTCAGCCTGAGG	-5609820	False	NA	4	True	AATAAA	-23	NA	5611059	5557850	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_5558106_5558683_5558820_5559939_5560077_5561464_5561531_5565016_5565079_5566732_5566773_5567482_5567561_5570146_5570240_5573914_5573970_5575412_5575546_5575815_5575979_5578379_5578612_5580007_5580132_5584280_5584323_5586193_5586270_5593326_5593412_5598724_5598822_5604363_5604441_5610841
transcript_1261.nic	chr1	-	716	4	NIC	ENSG00000008128.23	novel	700	5	NA	NA	-3	-193	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	45.3725320724628	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGGCATCATAGCCATTC	-1721920	True	NA	19	True	AAAAAG	-36	NA	1724327	1719358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_1719456_1721595_1721712_1722707_1722832_1723948
transcript_126106.known	chr20	+	585	3	FSM	ENSG00000171984.15	ENST00000378979.8	585	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	30.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTATGAAGTATGCTG	5749589	True	NA	7	True	AATAAA	-18	NA	5750392	5773447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_5750480_5772861_5773044_5773131
transcript_126107.known	chr20	+	1633	3	FSM	ENSG00000171984.15	ENST00000303142.11	1633	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	25.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGGGCCCTACTTTCTCT	5749597	True	NA	NA	False	AATAAA	-15	NA	5750400	5864395	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_5750480_5772861_5773044_5863023
transcript_126108.known	chr20	+	2462	5	FSM	ENSG00000089199.10	ENST00000378961.9	2462	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	5.97390157267426	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAAAAGCTTCATTGTTC	5911307	True	NA	NA	False	AATAAA	-13	NA	5911509	5925353	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_5911683_5916325_5916373_5916825_5916920_5922334_5924101_5924971
transcript_126110.known	chr20	-	3025	11	FSM	ENSG00000089195.15	ENST00000473131.5	3025	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	93.0225779045066	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGGGCACAGTGGCTCAT	-5946208	True	NA	NA	False	AATAAA	-7	NA	5950515	5937234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_5938727_5941052_5941140_5941242_5941346_5941950_5942037_5942427_5942787_5943558_5943684_5943826_5944032_5944161_5944254_5944804_5944915_5946405_5946534_5950277
transcript_126111.known	chr20	-	2929	11	FSM	ENSG00000089195.15	ENST00000203001.7	2929	11	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_8	13.9298241194927	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGGCTCATGCCTGTA	-5946226	True	NA	NA	False	AATAAA	-14	NA	5950533	5937227	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_5938727_5941052_5941140_5941242_5941346_5941950_5942037_5942427_5942787_5943558_5943684_5943947_5944032_5944161_5944254_5944804_5944915_5946405_5946534_5950277
transcript_126115.known	chr20	-	2239	10	FSM	ENSG00000089195.15	ENST00000453074.6	2239	10	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_8	97.6194425079121	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTATGGTCTTATGGATA	-5946251	True	NA	-4	True	ATTAAA	-21	NA	5950558	5937832	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_5938727_5941052_5941140_5941242_5941346_5941950_5942037_5942427_5942787_5943558_5943684_5943947_5944032_5944161_5944254_5946405_5946534_5950277
transcript_126119.known	chr20	-	2976	9	FSM	ENSG00000089195.15	ENST00000466974.5	2976	9	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_6	13.9104277432436	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTATGGTCTTATGGATA	-5946170	True	NA	-4	True	ATTAAA	-21	NA	5950477	5937832	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_5938727_5941052_5942037_5942427_5942787_5943558_5943684_5943947_5944032_5944161_5944254_5944804_5944915_5946405_5946534_5950277
transcript_126120.nic	chr20	-	616	4	ISM	ENSG00000089195.15	ENST00000466974.5	2976	9	-86	6329	-5	-1487	5prime_fragment	FALSE	canonical	3	296	junction_1	13.6707311029399	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTAGTTTTTATTTTAA	-5946256	True	NA	NA	False	ATTAAA	-15	NA	5950563	5944161	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_5944254_5944804_5944915_5946405_5946534_5950277
transcript_126123.known	chr20	+	7486	19	FSM	ENSG00000125885.13	ENST00000610722.4	7486	19	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	13.6585341656986	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGTTAAAACAAAAACTGAGC	5950216	True	NA	NA	False	ATTAAA	-15	NA	5950651	5998977	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_5951024_5952010_5952164_5952423_5952529_5954607_5954691_5955101_5955252_5957125_5957230_5958527_5958727_5963273_5963360_5967435_5967588_5967829_5968026_5972006_5972038_5973055_5973197_5977875_5978018_5982969_5983166_5984780_5985001_5985921_5986132_5987281_5987359_5993505_5993696_5994298
transcript_126129.nnic	chr20	+	1457	8	NNC	ENSG00000088766.12	novel	3925	7	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	346.75245537144	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAGGTTTCTTGATTAAT	5998022	True	NA	12	True	AATAAA	-22	NA	6006098	6037393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_6006553_6006666_6006835_6009774_6009913_6015360_6015491_6031284_6031371_6032011_6032081_6034463_6034556_6037073
transcript_126132.known	chr20	+	3925	7	FSM	ENSG00000088766.12	ENST00000378863.9	3925	7	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_1	97.8309199020887	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAGAAATATGGCTCTAAT	5998046	True	NA	NA	False	AATAAA	-22	NA	6006122	6040053	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_6006553_6009774_6009913_6015360_6015491_6031284_6031371_6032011_6032081_6034463_6034556_6037073
transcript_126134.nnic	chr20	+	1377	7	NNC	ENSG00000088766.12	novel	3925	7	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_1	278.978941857625	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAGGTTTCTTGATTAAT	5997996	True	NA	12	True	AATAAA	-22	NA	6006072	6037393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_6006615_6009774_6009913_6015360_6015491_6031284_6031371_6032011_6032081_6034463_6034556_6037073
transcript_126137.nnic	chr20	+	2248	7	NNC	ENSG00000088766.12	novel	3925	7	NA	NA	-20	651	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	286.207626655118	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTACCTTCAACTCAGGTT	5997996	True	NA	17	True	AATAAA	-17	NA	6006072	6038044	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_6006835_6009774_6009913_6015360_6015491_6031284_6031371_6032011_6032081_6034463_6034556_6037073
transcript_126138.known	chr20	+	3859	6	FSM	ENSG00000088766.12	ENST00000452938.5	3859	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	313.489648951923	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATTAAAATCTAGAAATA	5998016	True	NA	NA	False	AATAAA	-12	NA	6006092	6040043	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_6006553_6009774_6009913_6015360_6015491_6032011_6032081_6034463_6034556_6037073
transcript_126148.known	chr20	-	4637	15	FSM	ENSG00000101311.16	ENST00000217289.9	4637	15	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_14	8.77292914107288	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACGGTCCTGTTGTGTCCT	-6123018	False	NA	-7	True	AGTAAA	-19	NA	6123030	6074844	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_6077347_6079435_6079578_6084039_6084165_6085065_6085288_6087776_6087884_6088964_6089090_6094938_6094989_6096901_6097034_6097523_6097632_6107531_6107635_6110297_6110512_6112476_6112624_6115810_6116045_6119403_6119573_6122773
transcript_126156.nic	chr20	-	1329	4	ISM	ENSG00000101311.16	ENST00000217289.9	4637	15	-614	37724	-614	0	5prime_fragment	FALSE	canonical	3	9	junction_3	12.0277457017791	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAGAAAAAAGACA	-6123632	False	NA	0	True	NA	NA	NA	6123644	6112568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_6112624_6115810_6116045_6119403_6119573_6122773
transcript_126157.nnic	chr20	-	1485	4	NNC	ENSG00000101311.16	novel	567	4	NA	NA	-603	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	10.6144555520604	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAGAAAAAAGACA	-6123621	False	NA	0	True	NA	NA	NA	6123633	6112568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_6112624_6115810_6116045_6119403_6119740_6122773
transcript_126161.known	chr20	+	3545	3	FSM	ENSG00000125845.7	ENST00000378827.5	3545	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCATTCTATAAAGTCCAA	6767641	True	NA	2	True	AATAAA	-17	NA	6767685	6780246	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_6768876_6770119_6770473_6778244
transcript_126162.known	chr20	-	6103	8	FSM	ENSG00000125827.9	ENST00000246024.7	6103	8	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_7	5.03862631101383	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTCTGTTCATTCATTC	-8019102	True	NA	1	True	NA	NA	NA	8019761	7977345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_7982622_7983793_7983858_7987287_7987390_7996025_7996072_7999731_7999861_8001495_8001542_8010199_8010316_8019437
transcript_126174.known	chr20	+	5674	40	FSM	ENSG00000101333.19	ENST00000378473.9	5674	40	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	9.50497291898636	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCAAAGATTCTGAGTGG	9069037	False	NA	NA	False	AATAAA	-25	NA	9069086	9480808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_9069207_9096286_9096343_9217389_9217453_9307799_9307899_9337125_9337207_9338007_9338068_9338893_9339038_9362895_9362976_9365460_9365515_9371213_9371296_9372302_9372404_9373046_9373105_9380053_9380163_9384200_9384412_9387462_9387557_9389878_9389959_9390530_9390616_9393587_9393679_9395522_9395619_9401489_9401591_9405312_9405349_9407916_9408059_9408632_9408718_9409056_9409182_9411036_9411089_9419806_9419910_9421296_9421462_9423747_9423953_9435559_9435649_9437001_9437153_9443980_9444031_9444177_9444244_9453346_9453463_9457413_9457490_9459634_9459811_9468570_9468673_9472789_9472848_9473278_9473366_9476716_9476754_9478920
transcript_126182.known	chr20	+	5429	11	FSM	ENSG00000132623.16	ENST00000378392.6	5429	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	18.495675170158	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTGTTAATTGATTATGC	10033464	True	NA	8	True	AATACA	-20	NA	10034986	10058303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_10035334_10035578_10035643_10038257_10038648_10043121_10043322_10044393_10044544_10045573_10045698_10049389_10050213_10051662_10051890_10053111_10053276_10054461_10054600_10055501
transcript_126183.known	chr20	+	5303	10	FSM	ENSG00000132623.16	ENST00000378380.4	5303	10	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	11.6279781795121	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTGTTAATTGATTATGC	10033526	True	NA	8	True	AATACA	-20	NA	10035048	10058303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_10035334_10038257_10038648_10043121_10043322_10044393_10044544_10045573_10045698_10049389_10050213_10051662_10051890_10053111_10053276_10054461_10054600_10055501
transcript_126187.nic	chr20	+	2401	8	ISM	ENSG00000132623.16	ENST00000378380.4	5303	10	-98	5088	-36	-2612	5prime_fragment	FALSE	canonical	3	31	junction_4	12.5584348433348	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAAAGGCAAGACACCTCC	10033428	True	NA	NA	False	ATTAAA	-43	NA	10034950	10053215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_10035334_10038257_10038648_10043121_10043322_10044393_10044544_10045573_10045698_10049389_10050213_10051662_10051890_10053111
transcript_126190.nic	chr20	+	1696	6	ISM	ENSG00000132623.16	ENST00000378380.4	5303	10	-98	8465	-36	-5989	5prime_fragment	FALSE	canonical	3	31	junction_4	14.7377067415524	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAAAGGGAAATTTGT	10033428	True	NA	NA	False	AAAAAG	-22	NA	10034950	10049838	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_10035334_10038257_10038648_10043121_10043322_10044393_10044544_10045573_10045698_10049389
transcript_126195.nic	chr20	+	1633	4	ISM	ENSG00000132623.16	ENST00000378380.4	5303	10	-98	13250	-36	1837	5prime_fragment	FALSE	canonical	3	47	junction_3	11.8977121983832	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGAATTTCATCTGAAAT	10033428	True	NA	NA	False	AATAAA	-18	NA	10034950	10045053	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_10035334_10038257_10038648_10043121_10043322_10044393
transcript_126199.nic	chr20	+	1098	2	ISM	ENSG00000132623.16	ENST00000488991.1	2805	11	-166	16855	-36	-4244	5prime_fragment	FALSE	canonical	3	76	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAAGTAGAGCATTTCTT	10033428	True	NA	NA	False	TATAAA	-25	NA	10034950	10038972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_10035334_10038257
transcript_1262.nic	chr1	-	771	4	ISM	ENSG00000008128.23	ENST00000357760.6	2446	20	-367	16478	-334	-193	5prime_fragment	FALSE	canonical	3	63	junction_3	15.8954920234218	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGGCATCATAGCCATTC	NA	False	NA	19	True	AAAAAG	-36	NA	1724691	1719358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_1719456_1721595_1721712_1722707_1722832_1724257
transcript_126200.known	chr20	+	2050	8	FSM	ENSG00000132639.14	ENST00000304886.6	2050	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.29362644830535	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATCTGCTTTAATTTCT	10218763	True	NA	NA	False	ATTAAA	-15	NA	10218832	10307418	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_10218978_10275428_10275564_10277684_10277727_10284723_10284773_10292881_10293000_10296924_10297051_10299267_10299413_10306128
transcript_126204.known	chr20	-	6714	6	FSM	ENSG00000125863.20	ENST00000347364.7	6714	6	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_3	553.010162655263	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTCTAGTATTGTGG	-10420278	True	NA	NA	False	AATAAA	-23	NA	10434222	10401008	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_10405688_10407615_10407727_10408627_10408804_10412529_10413932_10420527_10420759_10434107
transcript_126206.nnic	chr20	-	1190	5	NIC	ENSG00000125863.20	novel	6714	6	NA	NA	-53	0	combination_of_known_splicesites	FALSE	canonical	3	55	junction_3	559.990792335017	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGAGTGTATTTGTTTTC	-10420331	True	NA	0	True	AATAAA	-26	NA	10434275	10405183	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_10405688_10407615_10407727_10408627_10408804_10420527_10420759_10434107
transcript_126207.nic	chr20	-	808	3	ISM	ENSG00000125863.20	ENST00000652676.1	1669	7	-74	8585	-50	-8336	5prime_fragment	FALSE	canonical	3	1249	junction_1	112.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGATGTCTCGTTTGGAA	-10420328	True	NA	2	True	AATAAA	-28	NA	10434272	10413519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_10413932_10420527_10420759_10434107
transcript_126209.nic	chr20	-	908	3	ISM	ENSG00000125863.20	ENST00000652676.1	1669	7	-365	8776	-341	-8527	5prime_fragment	FALSE	canonical	3	1249	junction_1	112.5	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTGTCATTAAATCATT	NA	False	NA	-17	True	AATAAA	-14	NA	10434563	10413710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_10413932_10420527_10420759_10434107
transcript_126212.known	chr20	+	6056	8	FSM	ENSG00000149346.15	ENST00000334534.10	6056	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	6.17433793856409	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTGTATCACTTCTGT	10433790	True	NA	1	True	AGTAAA	-15	NA	10435304	10628030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_10435454_10458175_10458232_10556230_10556321_10560699_10560821_10598674_10598753_10601730_10601820_10621313_10621415_10622658
transcript_126225.known	chr20	-	5940	26	FSM	ENSG00000101384.12	ENST00000254958.10	5940	26	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_12	14.6803814664334	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGTGTCGAGGTGAATTG	-10672474	True	NA	-3	True	AATAAA	-20	NA	10673999	10637683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_10639956_10640782_10640934_10641112_10641245_10641459_10641694_10641782_10641893_10642487_10642602_10643777_10643864_10644356_10644385_10644862_10644980_10645142_10645257_10645355_10645470_10645970_10646085_10646938_10647104_10647959_10648111_10648548_10648723_10649060_10649108_10649521_10649636_10650246_10650361_10651580_10651695_10652130_10652251_10652467_10652599_10656397_10656459_10658467_10658723_10663962_10664015_10672700_10673007_10673449
transcript_126226.nnic	chr20	-	4191	26	NNC	ENSG00000101384.12	novel	5940	26	NA	NA	-38	-215	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.1655001937176	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACAGTGTGGCCTCTTCTG	-10673998	False	NA	-1	True	AATAAA	-45	NA	10674037	10637973	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_10638459_10640782_10640934_10641112_10641245_10641459_10641694_10641782_10641893_10642487_10642602_10643777_10643864_10644356_10644385_10644862_10644980_10645142_10645257_10645355_10645470_10645970_10646085_10646938_10647104_10647959_10648111_10648548_10648723_10649060_10649108_10649521_10649636_10650246_10650361_10651580_10651695_10652130_10652251_10652467_10652599_10656397_10656459_10658467_10658723_10663962_10664015_10672700_10673007_10673449
transcript_126236.known	chr20	+	4826	6	FSM	ENSG00000132640.15	ENST00000399006.6	4826	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	79.6477243868273	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTTTGTCACACCCTTG	11886151	True	NA	29	True	AATAAA	-28	NA	11890816	11926609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_11890955_11917777_11918012_11918333_11918602_11919085_11919177_11919717_11919837_11922633
transcript_126240.known	chr20	+	4686	5	FSM	ENSG00000132640.15	ENST00000254977.7	4686	5	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_3	25.9169346181218	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTTTGTCACACCCTTG	NA	False	NA	29	True	AATAAA	-28	NA	11890722	11926609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_11890955_11918333_11918602_11919085_11919177_11919717_11919837_11922633
transcript_126243.known	chr20	+	849	4	FSM	ENSG00000132640.15	ENST00000449299.5	849	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	88.0946460726568	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCATTGAAAATAAACGCAAG	11886204	True	NA	NA	False	NA	NA	NA	11890869	11923010	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_11890955_11918333_11918602_11919717_11919837_11922633
transcript_126250.known	chr20	-	2342	14	FSM	ENSG00000089123.16	ENST00000337743.9	2342	14	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_8	9.62676249904493	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAGAGAGCTATTATTTA	-13637152	True	NA	-4	True	AATAAA	-18	NA	13638932	13389393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_13390453_13417447_13417522_13435043_13435155_13483226_13483338_13528432_13528512_13534021_13534142_13559007_13559115_13569506_13569587_13580896_13580982_13587249_13587371_13623445_13623515_13625184_13625253_13629933_13630153_13638893
transcript_126264.known	chr20	-	3188	14	FSM	ENSG00000089048.15	ENST00000617257.2	3188	14	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_13	23.7763245575816	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTGTATAGCACTGAT	-13777554	True	NA	-8	True	AATAAA	-18	NA	13784919	13714324	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_13715168_13717367_13717515_13718907_13718985_13728377_13728466_13733720_13733843_13759691_13759854_13766776_13766925_13769906_13770022_13771330_13771484_13772514_13772616_13775156_13775271_13775872_13776271_13782503_13783184_13784879
transcript_126266.nic	chr20	-	1870	9	ISM	ENSG00000089048.15	ENST00000617257.2	3188	14	-2	45410	-2	-45410	5prime_fragment	FALSE	canonical	3	295	junction_8	26.8418400077193	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGCAAAGAAAATGATATGGA	-13777556	True	NA	92	True	AATACA	-39	NA	13784921	13759734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_13759854_13766776_13766925_13769906_13770022_13771330_13771484_13772514_13772616_13775156_13775271_13775872_13776271_13782503_13783184_13784879
transcript_126267.nic	chr20	-	1794	9	ISM	ENSG00000089048.15	ENST00000617257.2	3188	14	0	45484	0	-45484	5prime_fragment	FALSE	canonical	3	295	junction_8	26.8418400077193	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCAGAAGGATGATGAAGAA	-13777554	True	NA	18	True	AAGAAA	-2	NA	13784919	13759808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_13759854_13766776_13766925_13769906_13770022_13771330_13771484_13772514_13772616_13775156_13775271_13775872_13776271_13782503_13783184_13784879
transcript_126270.nic	chr20	-	605	2	ISM	ENSG00000089048.15	ENST00000617257.2	3188	14	-10	68304	-10	-68304	5prime_fragment	FALSE	canonical	3	295	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGTTCAACATACTACAG	-13777564	True	NA	NA	False	AAGAAA	-12	NA	13784929	13782628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_13783184_13784879
transcript_126271.nic	chr20	-	1056	2	ISM	ENSG00000089048.15	ENST00000617257.2	3188	14	-678	68521	-678	-68521	5prime_fragment	FALSE	canonical	3	295	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAGACTAAAAAAGAAATC	NA	False	NA	NA	False	AATAAA	-12	NA	13785597	13782845	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_13783184_13784879
transcript_126274.nic	chr20	+	1194	12	NIC	ENSG00000101247.18	novel	2409	12	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_3	43.9592222763381	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTCCAGAATTTTCATC	13783477	True	NA	14	True	AATAAA	-18	NA	13785048	13817228	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_13785291_13787311_13787353_13788588_13788653_13793159_13793228_13794837_13794942_13798460_13798501_13801485_13801684_13808841_13808903_13814417_13814516_13816462_13816547_13816874_13816958_13817117
transcript_126278.known	chr20	+	2409	12	FSM	ENSG00000101247.18	ENST00000378081.9	2409	12	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_9	36.3938510835857	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGCGTTTTGTTTTTTGG	13784983	False	NA	NA	False	AGTAAA	-15	NA	13785006	13818421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_13785291_13787311_13787353_13788588_13788653_13793179_13793228_13794837_13794942_13798460_13798501_13801485_13801684_13808841_13808903_13814417_13814516_13816462_13816547_13816874_13816958_13817117
transcript_126281.nic	chr20	+	1080	11	NIC	ENSG00000101247.18	novel	5449	11	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_3	39.1821387879733	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTCCAGAATTTTCATC	13783493	True	NA	14	True	AATAAA	-18	NA	13785064	13817228	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_13785291_13787311_13787353_13788588_13788653_13793159_13793228_13794837_13794942_13798460_13798501_13801485_13801684_13808841_13808903_13816462_13816547_13816874_13816958_13817117
transcript_126282.known	chr20	+	5449	11	FSM	ENSG00000101247.18	ENST00000378106.10	5449	11	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_8	27.3468462532702	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACTGTGTTTTAGAGTAA	13783456	True	NA	NA	False	GATAAA	-15	NA	13785027	13821580	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_13785291_13787311_13787353_13788588_13788653_13793179_13793228_13794837_13794942_13798460_13798501_13801485_13801684_13808841_13808903_13816462_13816547_13816874_13816958_13817117
transcript_126285.known	chr20	+	991	10	FSM	ENSG00000101247.18	ENST00000463598.1	991	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	51.4934971322941	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTCCAGAATTTTCATC	13783478	True	NA	14	True	AATAAA	-18	NA	13785049	13817228	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_13785291_13787311_13787353_13788588_13788653_13793159_13793228_13798460_13798501_13801485_13801684_13808841_13808903_13816462_13816547_13816874_13816958_13817117
transcript_126287.known	chr20	+	933	10	FSM	ENSG00000101247.18	ENST00000475968.5	933	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	43.5430821141545	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTCCAGAATTTTCATC	13783516	True	NA	14	True	AATAAA	-18	NA	13785087	13817228	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_13785291_13787311_13787353_13788588_13788653_13793179_13793228_13798460_13798501_13801485_13801684_13808841_13808903_13816462_13816547_13816874_13816958_13817117
transcript_126291.known	chr20	+	1105	4	FSM	ENSG00000172264.18	ENST00000483997.5	1105	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	4.89897948556636	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAAGTATGGTGATTTCT	13994915	True	NA	NA	False	AATAAA	-15	NA	13995501	14053679	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_13995810_14002287_14002405_14051921_14052021_14053098
transcript_126295.known	chr20	-	5276	26	FSM	ENSG00000089177.19	ENST00000354981.7	5276	26	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_24	8.50750257126026	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTAGCTCAGCTTATTT	-16571477	True	NA	-6	True	ATTAAA	-18	NA	16573448	16272103	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_16273412_16312334_16312419_16335925_16336016_16356329_16356453_16370585_16370637_16371664_16371762_16374256_16374410_16378804_16380164_16381693_16381748_16404812_16404902_16406373_16406457_16427103_16427242_16428952_16429005_16429862_16429983_16494290_16494351_16497612_16497679_16504371_16504548_16505721_16505854_16506021_16506191_16507957_16508101_16511417_16511528_16512825_16512924_16515547_16515665_16526091_16526206_16528370_16528441_16573228
transcript_126296.known	chr20	-	5109	25	FSM	ENSG00000089177.19	ENST00000636835.1	5109	25	0	0	0	0	multi-exon	TRUE	canonical	1	9	junction_6	10.5986601616536	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTAGCTCAGCTTATTT	-16571463	True	NA	-6	True	ATTAAA	-18	NA	16573434	16272103	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_16273412_16312334_16312419_16335925_16336016_16356329_16356453_16370585_16370637_16371664_16371762_16378804_16380164_16381693_16381748_16404812_16404902_16406373_16406457_16427103_16427242_16428952_16429005_16429862_16429983_16494290_16494351_16497612_16497679_16504371_16504548_16505721_16505854_16506021_16506191_16507957_16508101_16511417_16511528_16512825_16512924_16515547_16515665_16526091_16526206_16528370_16528441_16573228
transcript_126304.known	chr20	+	1588	7	FSM	ENSG00000125870.11	ENST00000377943.9	1588	7	0	0	0	0	multi-exon	FALSE	canonical	3	831	junction_1	388.094239700732	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTACTTCTTTGTAAT	16712173	True	NA	12	True	AATAAA	-17	NA	16729960	16741776	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_16730065_16731667_16731767_16732163_16732337_16737260_16737402_16738851_16738903_16740324_16740414_16740845
transcript_126305.known	chr20	+	2411	7	FSM	ENSG00000125870.11	ENST00000246071.8	2411	7	0	0	0	0	multi-exon	FALSE	canonical	3	801	junction_1	398.899075233601	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATGAGTTTGGGCAATT	16712238	True	NA	NA	False	AATAAA	-23	NA	16730025	16742564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_16730165_16731667_16731767_16732163_16732337_16737260_16737402_16738851_16738903_16740324_16740414_16740845
transcript_126309.nic	chr20	+	546	4	ISM	ENSG00000125870.11	ENST00000246071.8	2411	7	-45	5214	20	-4426	5prime_fragment	FALSE	canonical	3	801	junction_1	514.376213377805	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAAAACTGTGGAACAGAC	16712193	True	NA	NA	False	AAAAAG	-12	NA	16729980	16737350	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_16730165_16731667_16731767_16732163_16732337_16737260
transcript_126313.known	chr20	+	540	3	FSM	ENSG00000125870.11	ENST00000478522.1	540	3	0	0	0	0	multi-exon	FALSE	canonical	3	801	junction_1	579	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATAGAAAAACAGTAGTGG	16712241	True	NA	NA	False	NA	NA	NA	16730028	16732468	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_16730165_16731667_16731767_16732163
transcript_126314.nic	chr20	+	278	2	ISM	ENSG00000125870.11	ENST00000478522.1	540	3	-48	707	20	-707	5prime_fragment	FALSE	canonical	3	801	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGTAAGTGCTTTTTAG	16712193	True	NA	NA	False	ATTAAA	-3	NA	16729980	16731761	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_16730165_16731667
transcript_126316.known	chr20	-	2217	8	FSM	ENSG00000125864.14	ENST00000377873.8	2217	8	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_7	3.64215679542342	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCTTTGTCTAATTAATA	-17531263	True	NA	-1	True	ATTAAA	-19	NA	17531379	17493904	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_17495030_17496937_17497024_17498819_17499041_17508888_17508997_17511975_17512069_17514720_17514817_17524847_17524909_17530952
transcript_126318.known	chr20	+	1853	5	FSM	ENSG00000125868.16	ENST00000474024.5	1853	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	905.915283014919	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTCGTGTAATTTTCATG	17556679	True	NA	19	True	AATAAA	-19	NA	17570081	17608242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_17570212_17591931_17592064_17600737_17601046_17604554_17604632_17607036
transcript_126322.known	chr20	+	3405	4	FSM	ENSG00000125868.16	ENST00000246069.12	3405	4	0	0	0	0	multi-exon	FALSE	canonical	3	1982	junction_2	160.37941125829	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGCTTGACTGTGAAGT	17556672	True	NA	8	True	AATAAA	-20	NA	17570074	17609919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_17570212_17600737_17601046_17604554_17604632_17607036
transcript_126328.nic	chr20	+	430	2	ISM	ENSG00000125868.16	ENST00000449141.2	795	5	-213	6390	-198	-6390	5prime_fragment	FALSE	canonical	3	2329	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGCTGTCATTTTTTGTC	17569786	True	NA	NA	False	AAGAAA	-14	NA	17569876	17600832	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_17570212_17600737
transcript_126331.known	chr20	-	3727	25	FSM	ENSG00000125844.17	ENST00000360807.8	3727	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	147.76599720692	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGGTCTCGTCTGGTCTT	-17669976	True	NA	-2	True	ATTAAA	-21	NA	17682295	17613677	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_17614221_17614736_17614881_17615430_17615530_17615925_17616010_17616731_17616840_17618595_17618680_17619632_17619729_17620298_17620371_17620714_17620808_17621457_17621548_17621689_17621774_17621854_17621948_17624575_17624669_17625511_17625603_17627347_17627383_17627503_17627683_17629822_17629962_17633459_17633614_17635545_17635665_17636576_17636730_17641796_17641920_17642978_17643128_17658604_17658690_17659979_17660529_17682027
transcript_126343.nic	chr20	-	829	3	ISM	ENSG00000125844.17	ENST00000377807.6	3792	26	-40	46395	-28	-467	5prime_fragment	FALSE	canonical	3	36	junction_2	1.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGCAAAAGTGGAACCAGC	-17670004	True	NA	NA	False	AAAAAG	-16	NA	17682323	17660072	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_17660529_17679998_17680076_17682027
transcript_126344.nic	chr20	-	576	3	ISM	ENSG00000125844.17	ENST00000377807.6	3792	26	-40	46648	-28	-720	5prime_fragment	FALSE	canonical	3	36	junction_2	1.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGAGAAAACAGTGGAGA	-17670004	True	NA	-4	True	AAGAAA	-3	NA	17682323	17660325	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_17660529_17679998_17680076_17682027
transcript_126345.known	chr20	-	1191	2	FSM	ENSG00000125844.17	ENST00000398782.2	1191	2	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAGAAGGGGCCCAGAACC	-17669976	True	NA	NA	False	GGGGCT	-18	NA	17682295	17659605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_17660529_17682027
transcript_126350.known	chr20	-	1263	4	FSM	ENSG00000125850.11	ENST00000483661.5	1263	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	35.1852241715184	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGTTTAAGCAAGGCAAG	-18058723	True	NA	-37	True	AATAAA	-18	NA	18059050	18024261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_18024953_18041533_18041724_18056656_18056878_18058889
transcript_126351.nnic	chr20	-	1059	3	NIC	ENSG00000125850.11	novel	1263	4	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	36.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGTTTAAGCAAGGCAAG	-18058740	True	NA	-37	True	AATAAA	-18	NA	18059067	18024261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_18024953_18041533_18041724_18058889
transcript_126352.known	chr20	-	1583	4	FSM	ENSG00000125850.11	ENST00000278780.7	1583	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	21.853044537445	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAACATTGACCTACAGCT	-18057547	True	NA	-21	True	AATAAA	-34	NA	18057916	18024162	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_18024953_18041533_18041724_18056656_18056878_18057534
transcript_126358.known	chr20	-	2288	14	FSM	ENSG00000089006.17	ENST00000377768.7	2288	14	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_13	152.050871275443	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGCCTGTTTTCGTGGAAA	-17968946	False	NA	-22	True	AATAAA	-20	NA	17968980	17941596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_17942408_17943109_17943196_17947485_17947646_17948889_17948977_17949063_17949104_17950131_17950208_17950290_17950397_17951499_17951596_17952586_17952711_17953995_17954118_17955364_17955476_17956932_17957038_17968374_17968458_17968699
transcript_12636.known	chr1	+	1728	3	FSM	ENSG00000163399.16	ENST00000488733.1	1728	3	0	0	0	0	multi-exon	FALSE	canonical	3	1887	junction_2	113	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGGAGAGA	116344969	True	NA	NA	False	NA	NA	NA	116373268	116386144	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_116373524_116384013_116384125_116384782
transcript_126376.known	chr20	-	2341	13	FSM	ENSG00000089006.17	ENST00000377759.9	2341	13	0	0	0	0	multi-exon	FALSE	canonical	3	765	junction_12	89.0677020897898	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACGGCCTGTTTTCGTGG	-17950352	True	NA	-25	True	AATAAA	-17	NA	17968794	17941599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_17942408_17943109_17943196_17947485_17947646_17948889_17948977_17949063_17949104_17950131_17950208_17950290_17950397_17951499_17951596_17952586_17952711_17953995_17954118_17955364_17955476_17956932_17957038_17968374
transcript_126377.known	chr20	-	2025	13	FSM	ENSG00000089006.17	ENST00000490175.5	2025	13	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_12	235.928823423977	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGCCTGTTTTCGTGGAAA	-17950358	True	NA	-22	True	AATAAA	-20	NA	17968800	17941596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_17942408_17943109_17943196_17947485_17947646_17948889_17948977_17949063_17949104_17950131_17950208_17950290_17950397_17951499_17951596_17952586_17952711_17953995_17954118_17955364_17955476_17956932_17957038_17968699
transcript_12638.known	chr1	-	4746	2	FSM	ENSG00000203865.12	ENST00000674823.1	4746	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAAGATCTTGTTCCTAA	-116418463	True	NA	NA	False	NA	NA	NA	116418625	116401569	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_116406149_116418458
transcript_12639.known	chr1	-	1828	3	FSM	ENSG00000203865.12	ENST00000369492.5	1828	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCGGGTGTTCCTTTTTT	-116418421	True	NA	-4	True	TATAAA	-17	NA	116418583	116404713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_116406149_116406927_116407196_116418458
transcript_12640.known	chr1	-	301	2	FSM	ENSG00000203865.12	ENST00000676321.1	301	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCCAGAAAAATTGGGATA	-116418413	True	NA	NA	False	AATAAA	-24	NA	116418575	116413729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_116413914_116418458
transcript_12641.known	chr1	-	1086	6	FSM	ENSG00000116815.16	ENST00000369489.10	1086	6	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	18.661189672687	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGGTGGTTTGGCTACTGT	-116569727	True	NA	-1	True	AATAAA	-22	NA	116571026	116514533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_116514823_116519230_116519268_116521905_116521984_116535964_116536229_116544310_116544605_116570902
transcript_12642.known	chr1	-	892	4	FSM	ENSG00000116815.16	ENST00000369487.3	892	4	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_3	4.49691252107735	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTGCTTTACGTGTGT	-116569740	True	NA	NA	False	AATAAA	-36	NA	116571039	116521786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_116521984_116535964_116536229_116544310_116544605_116570902
transcript_126428.known	chr20	-	562	3	FSM	ENSG00000089006.17	ENST00000481323.1	562	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	23	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAATTGCATCAAGCGTC	-17950369	True	NA	NA	False	NA	NA	NA	17968811	17967918	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_17968290_17968374_17968454_17968699
transcript_12643.known	chr1	-	7326	12	FSM	ENSG00000143061.18	ENST00000369483.5	7326	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_7	29.6528119442043	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTACTGCAGTCTTCTA	-116664090	True	NA	-6	True	AGTAAA	-24	NA	116667755	116574398	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_116577563_116579391_116579878_116584644_116585053_116588693_116589105_116599940_116600346_116603623_116604026_116606491_116606552_116607941_116608332_116613764_116614176_116616079_116616458_116666283_116666957_116667617
transcript_126431.known	chr20	-	1087	1	FSM	ENSG00000089006.17	ENST00000606557.1	1087	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCCTCCACTCTTTTTCA	-17968740	False	NA	-10	True	AATAAA	-33	NA	17968774	17967687	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_17967700_17968800
transcript_126434.known	chr20	+	1936	5	FSM	ENSG00000125871.14	ENST00000377709.1	1936	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	230.104867397454	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGTTTTGTTTACTTT	17963895	True	NA	NA	False	AATAAA	-22	NA	17969072	17991122	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_17969142_17969800_17970131_17975683_17975904_17988165_17988299_17989938
transcript_126435.known	chr20	+	2231	5	FSM	ENSG00000125871.14	ENST00000377710.10	2231	5	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_2	45.2071620431984	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGTTTTGTTTACTTT	17968039	False	NA	NA	False	AATAAA	-22	NA	17969017	17991122	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_17969142_17969800_17970371_17975683_17975904_17988165_17988299_17989938
transcript_126442.nic	chr20	+	2154	4	NIC	ENSG00000125871.14	novel	2231	5	NA	NA	-143	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_2	230.275680194173	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGTTTTGTTTACTTT	17968842	False	NA	NA	False	AATAAA	-22	NA	17968874	17991122	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_17969142_17969800_17970371_17988165_17988299_17989938
transcript_126444.known	chr20	+	1781	3	FSM	ENSG00000125871.14	ENST00000377704.4	1781	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	242	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGTTTTGTTTACTTT	17963937	False	NA	NA	False	AATAAA	-22	NA	17969114	17991122	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_17969142_17969800_17970371_17989938
transcript_12645.known	chr1	-	7235	11	FSM	ENSG00000143061.18	ENST00000369486.8	7235	11	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_6	15.8757676979729	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCTGTTTACATTTACTGC	-116664068	True	NA	-15	True	AGTAAA	-15	NA	116667733	116574407	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_116577563_116579391_116579878_116584644_116585053_116588693_116589105_116599940_116600346_116603623_116604026_116607941_116608332_116613764_116614176_116616079_116616458_116666283_116666957_116667617
transcript_126458.known	chr20	+	3917	12	FSM	ENSG00000149474.15	ENST00000678777.1	3917	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_9	131.104651908565	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATCTAGGTGTTCTCAAA	18131734	True	NA	-25	True	NA	NA	NA	18137848	18188327	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_18138052_18142207_18142920_18145232_18145352_18150820_18150943_18159083_18159266_18161822_18162240_18162376_18162946_18181709_18181847_18183122_18183299_18183534_18183582_18184601_18184793_18187285
transcript_126460.known	chr20	+	3927	11	FSM	ENSG00000149474.15	ENST00000377681.8	3927	11	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_5	107.371364897723	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGAGCGTCAATCTAGTC	18137783	False	NA	22	True	AATAAA	-24	NA	18137841	18188374	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_18138052_18142207_18142920_18145232_18145352_18150820_18150943_18159083_18159266_18161819_18162240_18162376_18162946_18181709_18181847_18183122_18183299_18184601_18184793_18187285
transcript_126462.nic	chr20	+	3623	11	FSM	ENSG00000149474.15	ENST00000688188.1	3564	11	-61	2	-39	-2	multi-exon	FALSE	canonical	3	56	junction_5	112.767947573768	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTTCTACCTGTTGTA	18137767	False	NA	20	True	AATAAA	-16	NA	18137801	18188033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_18138052_18142207_18142920_18145232_18145352_18150820_18150943_18159083_18159266_18161822_18162240_18162376_18162946_18181709_18181847_18183122_18183299_18184601_18184793_18187285
transcript_126465.known	chr20	+	4067	11	FSM	ENSG00000149474.15	ENST00000676935.1	4067	11	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	46.8765399747038	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGTCAGTTTGCTTTCAA	18138084	True	NA	35	True	AATAAA	-37	NA	18138107	18188387	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_18138445_18142207_18142920_18145232_18145352_18150820_18150943_18159083_18159266_18161819_18162240_18162376_18162946_18181709_18181847_18183122_18183299_18184601_18184793_18187285
transcript_126467.known	chr20	+	4064	11	FSM	ENSG00000149474.15	ENST00000677610.1	4064	11	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	53.8461697802174	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGTCAGTTTGCTTTCAA	18138084	True	NA	35	True	AATAAA	-37	NA	18138107	18188387	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_18138445_18142207_18142920_18145232_18145352_18150820_18150943_18159083_18159266_18161822_18162240_18162376_18162946_18181709_18181847_18183122_18183299_18184601_18184793_18187285
transcript_126481.known	chr20	+	1151	2	FSM	ENSG00000232838.4	ENST00000432901.4	1151	2	0	0	0	0	multi-exon	FALSE	canonical	3	517	junction_1	0	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGTGTTACTTAAAGAAT	18131748	True	NA	12	True	AATAAA	-18	NA	18137862	18143169	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_18138052_18142207
transcript_126485.nic	chr20	+	1539	2	ISM	ENSG00000149474.15	ENST00000677610.1	4064	11	-240	45218	5	-44290	5prime_fragment	FALSE	canonical	3	31	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGTGTTACTTAAAGAAT	18131753	True	NA	12	True	AATAAA	-18	NA	18137867	18143169	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_18138445_18142207
transcript_126490.known	chr20	+	2654	7	FSM	ENSG00000125846.16	ENST00000425686.3	2654	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	17.3557547292598	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCCTGTGTCCCTCATT	18286957	True	NA	19	True	AATAAA	-25	NA	18288526	18316996	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_18288605_18297984_18298063_18298288_18298465_18305007_18305179_18305680_18305808_18306297_18306394_18315068
transcript_126496.known	chr20	+	2717	6	FSM	ENSG00000125846.16	ENST00000396026.7	2717	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	17.4997142833819	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGCCTGTGTCCCTCA	18288270	True	NA	17	True	AATAAA	-23	NA	18288282	18316994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_18288605_18297984_18298063_18305007_18305179_18305680_18305808_18306297_18306394_18315071
transcript_126501.known	chr20	+	2318	5	FSM	ENSG00000125846.16	ENST00000628216.2	2318	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	20.0249843945008	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAACTGTGCCTGTGTCCC	18286941	True	NA	14	True	AATAAA	-20	NA	18288510	18316991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_18288605_18297984_18298063_18305680_18305808_18306297_18306394_18315068
transcript_126503.known	chr20	+	2642	5	FSM	ENSG00000125846.16	ENST00000401790.5	2642	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	17.5712833908056	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGCCTGTGTCCCTCA	18288270	True	NA	17	True	AATAAA	-23	NA	18288282	18316994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_18288605_18305007_18305179_18305680_18305808_18306297_18306394_18315068
transcript_126507.known	chr20	+	2622	5	FSM	ENSG00000125846.16	ENST00000402618.6	2622	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	21.3775583264319	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGCCTGTGTCCCTCA	18288270	True	NA	17	True	AATAAA	-23	NA	18288282	18316994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_18288605_18305667_18305808_18306297_18306394_18310168_18310307_18315068
transcript_126509.known	chr20	+	616	4	FSM	ENSG00000125846.16	ENST00000626025.2	616	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	15.5777619273972	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTCGGAACGGCCTCAG	18286990	True	NA	NA	False	NA	NA	NA	18288559	18315376	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_18288605_18305667_18305808_18306270_18306394_18315068
transcript_126510.known	chr20	+	523	4	FSM	ENSG00000125846.16	ENST00000434018.5	523	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	19.9555060627944	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGTCCTGAGGGAGAAG	18286959	True	NA	NA	False	NA	NA	NA	18288528	18315279	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_18288605_18305667_18305808_18306297_18306394_18315068
transcript_126511.nnic	chr20	+	2227	4	NIC	ENSG00000125846.16	novel	2717	6	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_3	18.4571575998762	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGCCTGTGTCCCTCA	18286954	True	NA	17	True	AATAAA	-23	NA	18288523	18316994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_18288605_18305680_18305808_18306297_18306394_18315071
transcript_126517.nic	chr20	-	2378	10	NIC	ENSG00000089091.16	novel	3295	20	NA	NA	-56	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_9	13.64994460261	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTCATTCCTTTCTT	-18412785	True	NA	2	True	AATAAA	-21	NA	18413278	18383366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_18384565_18385015_18385091_18389700_18389829_18390378_18390460_18393710_18393812_18394253_18394351_18396471_18396547_18398522_18398627_18412645_18412854_18412967
transcript_126521.nic	chr20	-	2780	2	ISM	ENSG00000089091.16	ENST00000460891.5	3156	14	-292	61227	-12	-46851	intron_retention	FALSE	canonical	3	22	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAAAAAACCTCAAATCC	NA	False	NA	NA	False	AAAACA	-9	NA	18467293	18459570	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_18460307_18465249
transcript_126527.known	chr20	+	2156	9	FSM	ENSG00000132664.12	ENST00000377603.5	2156	9	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_7	8.78119439484174	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTCTATGGTATTCTGTT	18465634	True	NA	NA	False	AATAAA	-21	NA	18467389	18484646	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_18467569_18468943_18469062_18472841_18472910_18473390_18473459_18475074_18475188_18480037_18480182_18480401_18480510_18481618_18481811_18483480
transcript_12653.nic	chr1	-	3682	9	ISM	ENSG00000143061.18	ENST00000369486.8	7235	11	23	10126	23	-7314	5prime_fragment	FALSE	canonical	3	48	junction_4	16.1704785025057	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAGTGTCTACATGTATA	-116664045	True	NA	NA	False	AATAAA	-18	NA	116667710	116584533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_116585053_116588693_116589105_116599940_116600346_116603623_116604026_116607941_116608332_116613764_116614176_116616079_116616458_116666283_116666957_116667617
transcript_126532.known	chr20	+	2257	9	FSM	ENSG00000132664.12	ENST00000462997.5	2257	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	37.4631068519417	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCAGTCTATGGTATTCT	18465633	True	NA	NA	False	AATAAA	-18	NA	18467388	18484643	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_18467672_18468943_18469062_18472841_18472910_18473390_18473459_18475074_18475188_18480037_18480182_18480401_18480510_18481618_18481811_18483480
transcript_126534.nnic	chr20	-	2927	6	NNC	ENSG00000089050.16	novel	3843	5	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	34.9662694607246	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGAAGTTTCTCTTTATT	-18495867	True	NA	NA	False	ATTAAA	-20	NA	18497255	18486539	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_18487692_18488637_18489991_18490394_18490481_18493957_18494064_18495837_18495881_18497068
transcript_126537.nnic	chr20	-	2150	6	NNC	ENSG00000089050.16	novel	3843	5	NA	NA	-30	-777	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	34.9662694607246	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCTGATACTCTTCATT	-18495867	True	NA	55	True	AATATA	-14	NA	18497255	18487316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_18487692_18488637_18489991_18490394_18490481_18493957_18494064_18495837_18495881_18497068
transcript_126539.known	chr20	-	3843	5	FSM	ENSG00000089050.16	ENST00000337227.9	3843	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	12.2678441463853	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGAAGTTTCTCTTTATT	-18495837	True	NA	NA	False	ATTAAA	-20	NA	18497225	18486539	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_18489991_18490394_18490481_18493957_18494064_18495837_18495881_18497068
transcript_126545.known	chr20	-	830	4	FSM	ENSG00000089050.16	ENST00000491835.1	830	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	38.2186690854963	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGTAAAATTAAATAGGT	-18495786	True	NA	NA	False	NA	NA	NA	18497174	18489458	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_18489991_18490394_18490481_18493957_18494064_18497068
transcript_12655.nic	chr1	-	3263	6	ISM	ENSG00000143061.18	ENST00000369483.5	7326	12	2	30878	2	10987	5prime_fragment	FALSE	canonical	2	9	junction_1	30.970954134479	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGTTATGTGTATGTGT	-116664088	True	NA	NA	False	AATAAA	-25	NA	116667753	116605276	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_116606552_116607941_116608332_116613764_116614176_116616079_116616458_116666283_116666957_116667617
transcript_126552.known	chr20	+	3464	20	FSM	ENSG00000101310.17	ENST00000336714.8	3464	20	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_1	97.0557426148254	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTATTTTTATTTTTA	18507509	False	NA	NA	False	AATATA	-19	NA	18507519	18561415	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_18507991_18510821_18511057_18512224_18512283_18515649_18515737_18524432_18524670_18524934_18525021_18525787_18525933_18526372_18526532_18527495_18527612_18530679_18530804_18532663_18532745_18535652_18535743_18542295_18542403_18543018_18543173_18545955_18546034_18548608_18548771_18551088_18551176_18554234_18554391_18555107_18555174_18560650
transcript_126557.known	chr20	+	2680	20	FSM	ENSG00000101310.17	ENST00000643747.1	2680	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	179.181534095076	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGAAATAAATCTAGATG	18498908	True	NA	-18	True	NA	NA	NA	18507889	18561055	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_18507991_18510821_18511057_18512224_18512283_18515649_18515737_18524486_18524670_18524934_18525021_18525787_18525933_18526372_18526532_18527495_18527612_18530679_18530804_18532663_18532745_18535652_18535743_18542295_18542403_18543018_18543173_18545955_18546034_18548608_18548771_18551088_18551176_18554234_18554391_18555107_18555174_18560650
transcript_126559.known	chr20	+	3026	20	FSM	ENSG00000101310.17	ENST00000650089.1	3026	20	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_1	98.8923979443877	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTATTTTTATTTTTA	18498958	True	NA	NA	False	AATATA	-19	NA	18507939	18561415	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_18507973_18510821_18511057_18512224_18512283_18515649_18515737_18524432_18524670_18524934_18525021_18525787_18525933_18526372_18526532_18527495_18527612_18530679_18530804_18532663_18532745_18535652_18535743_18542295_18542403_18543018_18543173_18545955_18546034_18548608_18548771_18551088_18551176_18554234_18554391_18555107_18555174_18560650
transcript_12657.known	chr1	+	6314	9	FSM	ENSG00000134247.10	ENST00000393203.3	6314	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	9.78439446261239	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGTTGTGTGAGGAGCT	116909090	True	NA	9	True	ATTAAA	-17	NA	116909915	116990353	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_116910253_116941714_116942084_116944678_116945093_116949191_116949573_116961242_116961669_116966910_116967331_116974215_116974324_116984679_116984986_116986800
transcript_126571.known	chr20	+	3351	20	FSM	ENSG00000101310.17	ENST00000377465.6	3351	20	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	161.299518368899	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTATTTTTATTTTTA	18498958	True	NA	NA	False	AATATA	-19	NA	18507939	18561415	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_18508298_18510821_18511057_18512224_18512283_18515649_18515737_18524432_18524670_18524934_18525021_18525787_18525933_18526372_18526532_18527495_18527612_18530679_18530804_18532663_18532745_18535652_18535743_18542295_18542403_18543018_18543173_18545955_18546034_18548608_18548771_18551088_18551176_18554234_18554391_18555107_18555174_18560650
transcript_126590.known	chr20	+	575	2	FSM	ENSG00000232388.5	ENST00000435844.3	575	2	0	0	0	0	multi-exon	FALSE	canonical	3	1201	junction_1	0	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGTTTTCTTTTTTTTT	NA	False	NA	15	True	AATAAA	-21	NA	18567346	18569563	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_18567597_18569238
transcript_126591.known	chr20	+	490	2	FSM	ENSG00000232388.5	ENST00000411646.2	490	2	0	0	0	0	multi-exon	FALSE	canonical	3	451	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATCTGCGTTTTCTTTTTT	18557875	True	NA	12	True	AATAAA	-18	NA	18567431	18569560	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_18567597_18569235
transcript_126592.known	chr20	+	3953	6	FSM	ENSG00000125821.13	ENST00000377452.4	3953	6	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_5	26.7058046124808	288	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGGAGAATGGGGTGGAC	18577839	True	NA	NA	False	NA	NA	NA	18588053	18766644	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_18588116_18593730_18593822_18596005_18596242_18628126_18628234_18744099_18744272_18763359
transcript_126595.known	chr20	-	3241	3	FSM	ENSG00000179935.10	ENST00000662199.1	3241	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTAAACCTTTCTTTTGT	NA	False	NA	NA	False	NA	NA	NA	18794016	18786084	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_18788838_18789573_18789710_18793664
transcript_126596.known	chr20	+	3922	17	FSM	ENSG00000185052.13	ENST00000328041.11	3922	17	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	4.67707173346743	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTGGAAAGCTGTGCAT	19212430	True	NA	44	True	AATAAA	-45	NA	19212641	19722926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_19212985_19280958_19281088_19515487_19515565_19579999_19580075_19584970_19585056_19585440_19585545_19654061_19654137_19665863_19665890_19673600_19673655_19681857_19681992_19684175_19684337_19685099_19685362_19693258_19693426_19696796_19696912_19698567_19698681_19717527_19717594_19720990
transcript_126599.known	chr20	+	1040	6	FSM	ENSG00000173418.12	ENST00000334982.9	1040	6	0	0	0	0	multi-exon	FALSE	canonical	3	581	junction_2	62.6469472520409	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAACTAAATCAGATTGT	20010156	True	NA	58	True	AATACA	-43	NA	20017361	20033655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_20017450_20022455_20022481_20025676_20025768_20026783_20026920_20032507_20032654_20033101
transcript_126601.known	chr20	+	1604	6	FSM	ENSG00000173418.12	ENST00000398602.2	1604	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	271.022803468638	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAACTAAATCAGATTGT	20010184	True	NA	58	True	AATACA	-43	NA	20017389	20033655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_20018042_20022455_20022481_20025676_20025768_20026783_20026920_20032507_20032654_20033101
transcript_126603.known	chr20	+	920	5	FSM	ENSG00000173418.12	ENST00000310450.8	920	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	279.930683384298	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCTGAAGTTTGTTAG	20010104	True	NA	32	True	TATAAA	-35	NA	20017309	20033629	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_20017450_20022455_20022481_20025676_20025768_20026783_20026920_20033101
transcript_126609.known	chr20	-	4015	14	FSM	ENSG00000101343.15	ENST00000536226.2	4015	14	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_8	27.3225311795809	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTCTTGTGGGTTTTTC	-20047606	True	NA	-14	True	AGTAAA	-24	NA	20052466	20034367	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_20036363_20037322_20037572_20038348_20038451_20039608_20039849_20040685_20040767_20041565_20041626_20042324_20042517_20043491_20043663_20045307_20045487_20047764_20047932_20048342_20048502_20049339_20049432_20050469_20050623_20052291
transcript_126619.nic	chr20	-	332	2	ISM	ENSG00000101343.15	ENST00000536226.2	4015	14	-9	16107	-9	-14333	5prime_fragment	FALSE	canonical	3	289	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGGTCAGTCAGTGTGGT	-20047615	True	NA	NA	False	ATTAAA	-21	NA	20052475	20050474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_20050623_20052291
transcript_126620.known	chr20	+	2846	1	FSM	ENSG00000173404.5	ENST00000310227.3	2846	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTGGCCTGATTTCTG	20367965	True	NA	4	True	AATAAA	-18	NA	20368103	20370949	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_20368100_20370900
transcript_126621.known	chr20	-	9545	40	FSM	ENSG00000188559.16	ENST00000202677.12	9545	40	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_31	10.1494421943933	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAATTGTGTGAAAGCATA	-20710986	True	NA	1	True	AATAAA	-25	NA	20712644	20389529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_20393254_20396694_20396735_20412026_20412149_20472828_20472957_20495116_20495276_20503350_20503507_20505410_20505535_20511253_20511326_20512512_20513285_20520916_20521101_20524405_20524544_20524829_20524899_20526251_20526363_20531686_20531796_20535744_20535804_20536655_20536785_20546703_20546833_20571457_20571614_20571847_20571947_20572874_20573069_20583049_20583227_20584864_20584956_20589267_20589366_20591176_20591315_20601681_20601847_20605174_20605413_20611314_20611427_20616042_20616192_20619276_20619415_20620462_20620631_20629362_20629591_20635417_20635618_20637362_20637502_20639784_20639901_20640700_20640879_20643505_20643550_20653529_20653588_20676235_20676289_20680690_20680802_20712374
transcript_126624.nic	chr20	-	2728	15	ISM	ENSG00000188559.16	ENST00000202677.12	9545	40	-24	215143	-24	-13496	5prime_fragment	FALSE	canonical	3	39	junction_6	7.78702479141044	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCATAATGTTTTAAGAAA	-20712652	False	NA	NA	False	AAAAAG	-22	NA	20712668	20604672	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_20605413_20611314_20611427_20616042_20616192_20619276_20619415_20620462_20620631_20629362_20629591_20635417_20635618_20637362_20637502_20639784_20639901_20640700_20640879_20643505_20643550_20653529_20653588_20676235_20676289_20680690_20680802_20712374
transcript_126626.nic	chr20	-	2425	15	ISM	ENSG00000188559.16	ENST00000202677.12	9545	40	-246	215668	-246	-14021	5prime_fragment	FALSE	canonical	3	39	junction_6	7.78702479141044	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAGAAGCAACGAGGCA	NA	False	NA	NA	False	GATAAA	-15	NA	20712890	20605197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_20605413_20611314_20611427_20616042_20616192_20619276_20619415_20620462_20620631_20629362_20629591_20635417_20635618_20637362_20637502_20639784_20639901_20640700_20640879_20643505_20643550_20653529_20653588_20676235_20676289_20680690_20680802_20712374
transcript_126641.nic	chr20	+	2176	13	NIC	ENSG00000088970.16	novel	2102	13	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_7	32.5451609306207	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGTTAATATGTGATG	NA	False	NA	NA	False	AATAAA	-20	NA	21125953	21246622	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_21126205_21132096_21132160_21136389_21136553_21145564_21145655_21161870_21162508_21162849_21163160_21205490_21205531_21214534_21214701_21215582_21215649_21229010_21229116_21232733_21232831_21244244_21244289_21246478
transcript_126642.known	chr20	+	2102	13	FSM	ENSG00000088970.16	ENST00000619189.5	2102	13	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_3	25.5259943761039	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGTTAATATGTGATG	21120980	True	NA	NA	False	AATAAA	-20	NA	21126081	21246622	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_21126205_21132096_21132160_21136389_21136553_21145564_21145655_21161870_21162508_21162849_21163160_21205490_21205585_21214534_21214701_21215582_21215649_21229010_21229116_21232733_21232831_21244244_21244289_21246478
transcript_12665.nic	chr1	+	5363	24	NIC	ENSG00000116830.12	novel	9439	23	NA	NA	-36	1610	combination_of_known_junctions	FALSE	canonical	3	21	junction_23	48.6199722472489	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAGAAAAAAATCCTTA	117053830	True	NA	NA	False	NA	NA	NA	117060289	117103972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_117060375_117060454_117060558_117062386_117062474_117073660_117073728_117074869_117075860_117076179_117076295_117076640_117076824_117077915_117078044_117079567_117079650_117081827_117081948_117084017_117084169_117086416_117086523_117088800_117088983_117090054_117090209_117090531_117090624_117091327_117091411_117091816_117091951_117092730_117092902_117095308_117095368_117096148_117096300_117097350_117097434_117098832_117098908_117101379_117101563_117102193
transcript_126658.known	chr20	+	1875	11	FSM	ENSG00000088970.16	ENST00000616848.4	1875	11	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	49.1456000065113	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCCTGTGTTAATATGT	21120950	True	NA	NA	False	AATAAA	-16	NA	21126051	21246618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_21126205_21132096_21132160_21161870_21162508_21162849_21163160_21205490_21205585_21214534_21214701_21215582_21215649_21229010_21229116_21232733_21232831_21244244_21244289_21246478
transcript_126666.nic	chr20	+	1627	7	ISM	ENSG00000088970.16	ENST00000619189.5	2102	13	-56	40947	-12	-27239	5prime_fragment	FALSE	canonical	3	103	junction_3	12.7235564559949	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGCCAGGCGCCGTGG	21120924	True	NA	NA	False	TTTAAA	-15	NA	21126025	21205675	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_21126205_21132096_21132160_21136389_21136553_21145564_21145655_21161870_21162508_21162849_21163160_21205490
transcript_12667.nnic	chr1	+	4179	24	NNC	ENSG00000116830.12	novel	9439	23	NA	NA	-36	499	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_23	45.4603838835039	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCAGAAATAATGCTATGT	117053830	True	NA	NA	False	AATAAA	-18	NA	117060289	117102861	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_117060375_117060454_117060558_117062386_117062474_117073660_117073728_117074869_117075860_117076179_117076295_117076640_117076824_117077915_117078044_117079567_117079650_117081827_117081948_117084017_117084169_117086416_117086523_117088800_117088983_117090054_117090209_117090531_117090624_117091327_117091411_117091816_117091951_117092730_117092902_117095308_117095368_117096148_117096300_117097350_117097434_117098832_117098908_117101379_117101563_117102266
transcript_12668.nnic	chr1	+	5304	24	NNC	ENSG00000116830.12	novel	9439	23	NA	NA	-36	1624	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_23	45.4603838835039	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTACTTTCTCTACACTC	117053830	True	NA	NA	False	AAAAAG	-14	NA	117060289	117103986	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_117060375_117060454_117060558_117062386_117062474_117073660_117073728_117074869_117075860_117076179_117076295_117076640_117076824_117077915_117078044_117079567_117079650_117081827_117081948_117084017_117084169_117086416_117086523_117088800_117088983_117090054_117090209_117090531_117090624_117091327_117091411_117091816_117091951_117092730_117092902_117095308_117095368_117096148_117096300_117097350_117097434_117098832_117098908_117101379_117101563_117102266
transcript_126683.known	chr20	+	3408	30	FSM	ENSG00000088930.8	ENST00000377191.5	3408	30	0	0	0	0	multi-exon	TRUE	canonical	3	807	junction_5	69.6090150926163	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTTGTTATTTTG	21284189	True	NA	25	True	AATAAA	-19	NA	21303330	21389825	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_21303474_21326278_21326407_21326489_21326602_21328558_21328671_21330480_21330540_21330615_21330706_21331560_21331634_21331767_21331819_21332282_21332441_21333543_21333619_21333703_21333838_21333936_21333995_21334077_21334186_21339043_21339089_21340720_21340853_21344089_21344209_21346414_21346551_21348145_21348254_21348340_21348431_21349388_21349462_21354788_21354873_21356079_21356178_21356585_21356666_21357735_21357793_21365420_21365490_21365572_21365705_21368462_21368591_21381993_21382058_21386867_21387007_21389272
transcript_126691.nnic	chr20	+	3280	29	NIC	ENSG00000088930.8	novel	3408	30	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	186.247404447056	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTTGTTATTTTG	21284189	True	NA	25	True	AATAAA	-19	NA	21303330	21389825	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_21303474_21326489_21326602_21328558_21328671_21330480_21330540_21330615_21330706_21331560_21331634_21331767_21331819_21332282_21332441_21333543_21333619_21333703_21333838_21333936_21333995_21334077_21334186_21339043_21339089_21340720_21340853_21344089_21344209_21346414_21346551_21348145_21348254_21348340_21348431_21349388_21349462_21354788_21354873_21356079_21356178_21356585_21356666_21357735_21357793_21365420_21365490_21365572_21365705_21368462_21368591_21381993_21382058_21386867_21387007_21389272
transcript_126701.nic	chr20	+	1394	14	ISM	ENSG00000088930.8	ENST00000377191.5	3408	30	-58	50747	-58	-50747	5prime_fragment	FALSE	canonical	3	807	junction_5	64.4968693336828	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAATGAAGGTGAGTTTTA	NA	False	NA	29	True	AAAAAG	-4	NA	21303272	21339078	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_21303474_21326278_21326407_21326489_21326602_21328558_21328671_21330480_21330540_21330615_21330706_21331560_21331634_21331767_21331819_21332282_21332441_21333543_21333619_21333703_21333838_21333936_21333995_21334077_21334186_21339043
transcript_126703.nic	chr20	+	1359	13	ISM	ENSG00000088930.8	ENST00000377191.5	3408	30	-58	55640	-58	-55640	5prime_fragment	FALSE	canonical	3	807	junction_5	57.0041421496914	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGTGTTTCTATTGCAG	NA	False	NA	7	True	AAAAAG	-16	NA	21303272	21334185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_21303474_21326278_21326407_21326489_21326602_21328558_21328671_21330480_21330540_21330615_21330706_21331560_21331634_21331767_21331819_21332282_21332441_21333543_21333619_21333703_21333838_21333936_21333995_21334077
transcript_126719.nic	chr20	+	329	2	ISM	ENSG00000088930.8	ENST00000377191.5	3408	30	-58	63419	-58	-63419	5prime_fragment	FALSE	canonical	3	930	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACGTAACCCATTTTTGTC	NA	False	NA	NA	False	NA	NA	NA	21303272	21326406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_21303474_21326278
transcript_126720.known	chr20	-	974	1	FSM	ENSG00000275457.1	ENST00000622628.1	974	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAATCTAGCCGGTATTTA	-21303307	True	NA	2	True	AATAAA	-21	NA	21303704	21302730	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_21302700_21303700
transcript_126721.known	chr20	-	1738	2	FSM	ENSG00000125816.5	ENST00000351817.5	1738	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGATTATATGGATTGAT	NA	False	NA	NA	False	AATAAA	-2	NA	21397526	21395364	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_21396534_21396957
transcript_126722.known	chr20	-	3674	1	FSM	ENSG00000278041.1	ENST00000622757.1	3674	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTGATTGATTCCTTAC	-21502695	False	NA	-16	True	AATAAA	-18	NA	21502934	21499260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_21499300_21502900
transcript_126724.known	chr20	-	2538	2	FSM	ENSG00000125798.15	ENST00000419308.7	2538	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAATGAATTTTACAGTAG	-22584547	False	NA	NA	False	AATAAA	-20	NA	22584572	22580997	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_22583155_22584191
transcript_126725.known	chr20	-	4040	1	FSM	ENSG00000178726.7	ENST00000377103.3	4040	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTGTCCGGTGTATGG	-23049622	True	NA	NA	False	AATAAA	-29	NA	23049672	23045632	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_23045600_23049700
transcript_126728.known	chr20	+	1062	2	FSM	ENSG00000132661.4	ENST00000254998.3	1062	2	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_1	0	448	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTCTGATGTGTTTGA	23347083	True	NA	13	True	AATACA	-14	NA	23350790	23354771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_23351062_23353980
transcript_126730.known	chr20	-	514	3	FSM	ENSG00000232645.6	ENST00000687401.1	692	3	170	8	103	0	multi-exon	FALSE	canonical	2	11	junction_1	3.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTCATCTGCCTTATAA	-23357925	True	NA	NA	False	AATAAA	-16	NA	23358005	23356593	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_23356970_23357050_23357138_23357954
transcript_126732.known	chr20	+	4834	6	FSM	ENSG00000125812.16	ENST00000338121.10	4834	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_5	8.97552226892675	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGATGGGTACTTGTCAAT	23360608	True	NA	NA	False	AATAAA	-34	NA	23362181	23373062	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_23362238_23364362_23365748_23367002_23367098_23368761_23368930_23369583_23369742_23370090
transcript_126745.known	chr20	-	3837	11	FSM	ENSG00000125814.17	ENST00000377026.4	3837	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_8	31.1738672608966	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCTTGTTTTATTTTAA	-23419445	True	NA	-2	True	AATAAA	-19	NA	23421488	23374521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_23377487_23379444_23379496_23379866_23379936_23381212_23381318_23389945_23390031_23390208_23390265_23394921_23395000_23395138_23395186_23397071_23397189_23402992_23403073_23421304
transcript_126749.known	chr20	-	3824	10	FSM	ENSG00000125814.17	ENST00000398425.7	3824	10	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_7	28.0321684700953	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTTTATTTTAACCT	NA	False	NA	1	True	AATAAA	-22	NA	23421519	23374518	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_23377487_23379444_23379496_23379866_23379936_23381212_23381318_23389945_23390031_23390208_23390265_23394921_23395000_23397071_23397189_23402992_23403073_23421304
transcript_12675.known	chr1	+	9439	23	FSM	ENSG00000116830.12	ENST00000369466.9	9439	23	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_10	24.4646819140782	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGAAATCAGATTCATTA	117053866	True	NA	29	True	AATAAA	-22	NA	117060325	117107453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_117060375_117060454_117060558_117062386_117062474_117073660_117073728_117074869_117075860_117076179_117076295_117076640_117076824_117077915_117078044_117079567_117079650_117081827_117081948_117084017_117084169_117086416_117086523_117088800_117088983_117090054_117090209_117090531_117090624_117091327_117091411_117091816_117091951_117092730_117092902_117095308_117095368_117096148_117096300_117097350_117097434_117098832_117098908_117101379
transcript_126757.nnic	chr20	-	728	4	NNC	ENSG00000101439.9	novel	832	4	NA	NA	-121	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	248.693028093315	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCTGAGTTCTTGGCTG	-23638029	False	NA	-8	True	AATAAA	-15	NA	23638076	23633656	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_23634000_23635253_23635368_23637619_23637791_23637976
transcript_126758.nnic	chr20	-	764	4	NNC	ENSG00000101439.9	novel	832	4	NA	NA	-62	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	248.693028093315	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCTGAGTTCTTGGCTG	-23636480	True	NA	-8	True	AATAAA	-15	NA	23638017	23633656	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_23634000_23635253_23635368_23637619_23637792_23637882
transcript_126761.known	chr20	-	793	3	FSM	ENSG00000101439.9	ENST00000376925.8	793	3	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_2	14	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCTGAGTTCTTGGCTG	-23636418	True	NA	-8	True	AATAAA	-15	NA	23637955	23633656	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_23634000_23635253_23635368_23637619
transcript_126762.known	chr20	-	749	3	FSM	ENSG00000170373.9	ENST00000304749.7	749	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	3	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCTGAGTTCTTGGCTG	-23750176	True	NA	0	True	ATTAAA	-14	NA	23750935	23747561	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_23747900_23749015_23749130_23750638
transcript_126765.known	chr20	+	2092	4	FSM	ENSG00000101463.6	ENST00000376862.4	2092	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	8.52447456836295	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGTCGTTGGGTTTCAT	24469572	True	NA	45	True	NA	NA	NA	24469628	24666616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_24469754_24543019_24543578_24584855_24584994_24665345
transcript_126767.nnic	chr20	+	2007	4	NNC	ENSG00000101463.6	novel	417	2	NA	NA	173	-84	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	7.11805216802087	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTGCTGTTTTACGAG	24469783	True	NA	-39	True	NA	NA	NA	24469801	24666532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_24469926_24543019_24543578_24584855_24584994_24665345
transcript_126768.nnic	chr20	+	2091	4	NNC	ENSG00000101463.6	novel	417	2	NA	NA	173	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	7.11805216802087	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGTCGTTGGGTTTCAT	24469783	True	NA	45	True	NA	NA	NA	24469801	24666616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_24469926_24543019_24543578_24584855_24584994_24665345
transcript_126773.known	chr20	-	2117	10	FSM	ENSG00000101474.12	ENST00000451442.5	2117	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	271.779367670465	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGGTGTGGCCTGGGA	-24983082	False	NA	-1	True	AATAAA	-34	NA	24992642	24962924	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_24964023_24964374_24964399_24968891_24969085_24969525_24969661_24970196_24970372_24971459_24971577_24973644_24973738_24978766_24978883_24983902_24984020_24992593
transcript_126777.known	chr20	-	2202	9	FSM	ENSG00000101474.12	ENST00000217456.3	2202	9	0	0	0	0	multi-exon	FALSE	canonical	3	582	junction_1	48.048803314963	825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGGTGTGGCCTGGGA	-24983191	True	NA	-1	True	AATAAA	-34	NA	24992751	24962924	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_24964023_24968891_24969085_24969525_24969661_24970196_24970372_24971459_24971577_24973644_24973738_24978766_24978883_24983902_24984020_24992593
transcript_126785.nnic	chr20	-	2054	8	NIC	ENSG00000101474.12	novel	2202	9	NA	NA	-66	-21	combination_of_known_splicesites	FALSE	canonical	3	51	junction_1	222.951536785693	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCTGCTGATTAACCTT	NA	False	NA	-22	True	AATAAA	-13	NA	24992817	24962945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_24964023_24969525_24969661_24970196_24970372_24971459_24971577_24973644_24973738_24978766_24978883_24983902_24984020_24992593
transcript_126792.known	chr20	-	3632	14	FSM	ENSG00000154930.15	ENST00000323482.9	3632	14	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_6	4.38529009653515	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTCTTTGTGGTGATTT	-25058002	True	NA	-5	True	AATAAA	-16	NA	25058139	25006236	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_25007942_25009269_25009389_25012600_25012665_25012811_25012940_25013535_25013663_25013960_25014074_25015137_25015231_25020009_25020148_25021388_25021537_25022939_25023093_25023465_25023642_25030758_25030959_25048084_25048182_25057768
transcript_126807.nic	chr20	+	2843	15	NIC	ENSG00000197586.13	novel	2766	15	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_13	86.0960841983288	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	25190601	True	NA	28	True	AATAAA	-29	NA	25195669	25226729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_25195868_25206521_25206591_25207075_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25221231_25221334_25222837_25222979_25224100_25224158_25225161_25225318_25225498
transcript_126808.known	chr20	+	4104	15	FSM	ENSG00000197586.13	ENST00000376652.9	4104	15	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	71.3073614426895	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACGTGTCCAAAAATTTAT	25190643	True	NA	NA	False	NA	NA	NA	25195711	25228075	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_25195868_25206521_25206591_25207075_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25221231_25221334_25222837_25222979_25224100_25224158_25225204_25225318_25225498
transcript_126809.nic	chr20	+	2840	15	NIC	ENSG00000197586.13	novel	2766	15	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_13	83.9852088532406	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	25190601	True	NA	28	True	AATAAA	-29	NA	25195669	25226729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_25195868_25206521_25206591_25207078_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25221231_25221334_25222837_25222979_25224100_25224158_25225161_25225318_25225498
transcript_126810.known	chr20	+	2766	15	FSM	ENSG00000197586.13	ENST00000360031.6	2766	15	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	68.5488430066549	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	25190632	True	NA	28	True	AATAAA	-29	NA	25195700	25226729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_25195868_25206521_25206591_25207078_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25221231_25221334_25222837_25222979_25224100_25224158_25225204_25225318_25225498
transcript_126815.nic	chr20	+	2999	14	NIC	ENSG00000197586.13	novel	2708	14	NA	NA	-248	0	combination_of_known_junctions	TRUE	canonical	3	62	junction_12	85.5682709541501	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	NA	False	NA	28	True	AATAAA	-29	NA	25195444	25226729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_25195868_25207075_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25221231_25221334_25222837_25222979_25224100_25224158_25225161_25225318_25225498
transcript_126816.known	chr20	+	2708	14	FSM	ENSG00000197586.13	ENST00000354989.9	2708	14	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	68.2292515658113	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	25190624	True	NA	28	True	AATAAA	-29	NA	25195692	25226729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_25195868_25207075_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25221231_25221334_25222837_25222979_25224100_25224158_25225204_25225318_25225498
transcript_126821.known	chr20	+	2654	14	FSM	ENSG00000197586.13	ENST00000433259.6	2654	14	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_12	98.6309840056215	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	25190688	True	NA	28	True	AATAAA	-29	NA	25195756	25226729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_25195868_25206521_25206591_25207075_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25222837_25222979_25224100_25224158_25225161_25225318_25225498
transcript_126822.nic	chr20	+	2698	14	NIC	ENSG00000197586.13	novel	2654	14	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_2	86.0066049479606	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	25190601	True	NA	28	True	AATAAA	-29	NA	25195669	25226729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_25195868_25206521_25206591_25207075_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25222837_25222979_25224100_25224158_25225204_25225318_25225498
transcript_126826.nic	chr20	+	2695	14	NIC	ENSG00000197586.13	novel	2766	15	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_10	83.6517152690584	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	25190601	True	NA	28	True	AATAAA	-29	NA	25195669	25226729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_25195868_25206521_25206591_25207078_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25222837_25222979_25224100_25224158_25225204_25225318_25225498
transcript_126834.nic	chr20	+	2629	13	NIC	ENSG00000197586.13	novel	2708	14	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_9	84.9730349385419	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	25190601	True	NA	28	True	AATAAA	-29	NA	25195669	25226729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_25195868_25207075_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25222837_25222979_25224100_25224158_25225204_25225318_25225498
transcript_126846.nic	chr20	+	2399	13	NIC	ENSG00000197586.13	novel	2708	14	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_1	72.1646939684189	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	25190611	True	NA	28	True	AATAAA	-29	NA	25195679	25226729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_25195868_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25221231_25221334_25222837_25222979_25224100_25224158_25225204_25225318_25225498
transcript_126858.nic	chr20	+	2297	12	NIC	ENSG00000197586.13	novel	2708	14	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_1	89.9940310233668	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	25190611	True	NA	28	True	AATAAA	-29	NA	25195679	25226729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_25195868_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25222837_25222979_25224100_25224158_25225204_25225318_25225498
transcript_126877.known	chr20	+	2100	11	FSM	ENSG00000197586.13	ENST00000376666.3	2100	11	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_9	80.8197995543171	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	25213323	False	NA	28	True	AATAAA	-29	NA	25213339	25226729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25221231_25221334_25222837_25222979_25224100_25224158_25225161_25225318_25225498
transcript_126883.known	chr20	+	4116	20	FSM	ENSG00000100994.12	ENST00000216962.9	4116	20	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_16	21.8268177318447	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGGTCTGTGTTTCACT	25246187	True	NA	33	True	ATTAAA	-24	NA	25248084	25298012	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_25248422_25259236_25259339_25269128_25269208_25271382_25271487_25274591_25274724_25276645_25276758_25277243_25277327_25278318_25278463_25279056_25279150_25280265_25280413_25280948_25281113_25282032_25282148_25283175_25283278_25284103_25284252_25288424_25288484_25290480_25290623_25292405_25292614_25294157_25294293_25295603_25295671_25296369
transcript_126887.nnic	chr20	+	3991	19	NIC	ENSG00000100994.12	novel	4116	20	NA	NA	-83	0	combination_of_known_splicesites	TRUE	canonical	3	5	junction_16	61.876444988739	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGGTCTGTGTTTCACT	NA	False	NA	33	True	ATTAAA	-24	NA	25248001	25298012	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_25248422_25259236_25259339_25269128_25269208_25271382_25271487_25274591_25274724_25276645_25276758_25277243_25277327_25278318_25278463_25279056_25279150_25280265_25280413_25280948_25281113_25282032_25282148_25283175_25283278_25284103_25284252_25288424_25288484_25290480_25290623_25294157_25294293_25295603_25295671_25296369
transcript_12690.nic	chr1	+	1913	10	ISM	ENSG00000116830.12	ENST00000369466.9	9439	23	-36	25553	-36	5511	5prime_fragment	FALSE	canonical	3	192	junction_9	20.2594285320303	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAAAAGGAGAAAAGCA	117053830	True	NA	32	True	NA	NA	NA	117060289	117081900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_117060375_117060454_117060558_117062386_117062474_117073660_117073728_117074869_117075860_117076179_117076295_117076640_117076824_117077915_117078044_117079567_117079650_117081827
transcript_126903.known	chr20	-	1577	13	FSM	ENSG00000100997.20	ENST00000376542.8	1577	13	0	0	0	0	multi-exon	TRUE	canonical	1	72	junction_1	309.328843358219	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCGTTGCAAGTGAAATCC	-25382138	True	NA	NA	False	AATAAA	-24	NA	25390835	25294742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_25295031_25302218_25302347_25303549_25303629_25306832_25306916_25307965_25308046_25308456_25308495_25309445_25309576_25314924_25314971_25317047_25317079_25320198_25320319_25323324_25323431_25339226_25339352_25390512
transcript_126904.known	chr20	-	1960	13	FSM	ENSG00000100997.20	ENST00000339157.10	1960	13	0	0	0	0	multi-exon	FALSE	canonical	1	278	junction_4	200.948583805244	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTCTCTCTGCAGCGC	-25382138	True	NA	-21	True	AATAAA	-16	NA	25390835	25300213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_25300885_25302218_25302347_25303549_25303629_25306832_25306916_25307965_25308046_25308456_25308495_25309445_25309576_25314924_25314971_25317047_25317079_25320198_25320319_25323324_25323431_25339226_25339352_25390512
transcript_126916.nnic	chr20	+	2306	8	NNC	ENSG00000101003.10	novel	3311	7	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	199.522184332511	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGCCTTTTATTTCT	25398152	True	NA	24	True	AATAAA	-24	NA	25407655	25448563	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_25407896_25413789_25413855_25417103_25417203_25418104_25418196_25425210_25425328_25441701_25441777_25445922_25447061_25448082
transcript_126917.nnic	chr20	+	2288	8	NNC	ENSG00000101003.10	novel	3311	7	NA	NA	-17	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	199.522184332511	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTGAATGCCTTTTATT	25398152	True	NA	21	True	AATAAA	-21	NA	25407655	25448560	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_25407896_25413789_25413855_25417103_25417203_25418104_25418196_25425210_25425328_25441701_25441777_25445922_25447066_25448102
transcript_126921.known	chr20	+	3311	7	FSM	ENSG00000101003.10	ENST00000262460.5	3311	7	0	0	0	0	multi-exon	FALSE	canonical	3	526	junction_4	28.0455977928008	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGCCTTTTATTTCT	25398169	True	NA	24	True	AATAAA	-24	NA	25407672	25448563	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_25407896_25413789_25413855_25417103_25417203_25418104_25418196_25425210_25425328_25441701_25441777_25445922
transcript_126926.nic	chr20	+	1659	4	ISM	ENSG00000101003.10	ENST00000262460.5	3311	7	-17	29204	-17	1164	5prime_fragment	FALSE	canonical	3	538	junction_1	18.0800688297608	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAATGTGTTTGCCATT	25398152	True	NA	NA	False	AAGAAA	-14	NA	25407655	25419359	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_25407896_25413789_25413855_25417103_25417203_25418104
transcript_126942.known	chr20	-	4991	24	FSM	ENSG00000101004.15	ENST00000278886.11	4991	24	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_20	33.5399206318745	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTAAGTTTGTTTTTAAT	-25583701	True	NA	-5	True	AATAAA	-21	NA	25585531	25452696	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_25453643_25455672_25455787_25458382_25458530_25461521_25461636_25462382_25462542_25467388_25467459_25469990_25470096_25476042_25477090_25478922_25479207_25480160_25480268_25481967_25482101_25489243_25489325_25489874_25489986_25491350_25491526_25496662_25496804_25498209_25498347_25500839_25501011_25503951_25504105_25504887_25505079_25510673_25510741_25512833_25513007_25517752_25517850_25526407_25526599_25585454
transcript_126951.known	chr20	-	3801	23	FSM	ENSG00000101004.15	ENST00000422516.5	3801	23	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_7	38.7952082326952	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGTATAG	-25583687	True	NA	6	True	NA	NA	NA	25585517	25452825	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_25453643_25455672_25455787_25458382_25458530_25461521_25461636_25462382_25462542_25467388_25467459_25469990_25470096_25478922_25479207_25480160_25480268_25481967_25482101_25489243_25489325_25489874_25489986_25491350_25491526_25496662_25496804_25498209_25498347_25500839_25501011_25503951_25504105_25504887_25505079_25510673_25510741_25512833_25513007_25517752_25517850_25526407_25526599_25585454
transcript_12696.known	chr1	+	849	5	FSM	ENSG00000116830.12	ENST00000470935.1	849	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	96.1327207562545	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGGGAGGCTAAAGAAACAA	117053902	True	NA	NA	False	NA	NA	NA	117060361	117075444	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_117060375_117060454_117060562_117062386_117062474_117073660_117073728_117074869
transcript_126977.nic	chr20	-	3345	16	ISM	ENSG00000101004.15	ENST00000422516.5	3801	23	-102	25129	-88	3883	5prime_fragment	FALSE	canonical	3	67	junction_12	24.0689749585552	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGACTCGTCTCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25585619	25477954	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_25479207_25480160_25480268_25481967_25482101_25489243_25489325_25489874_25489986_25491350_25491526_25496662_25496804_25498209_25498347_25500839_25501011_25503951_25504105_25504887_25505079_25510673_25510741_25512833_25513007_25517752_25517850_25526407_25526599_25585454
transcript_126980.nnic	chr20	-	3378	16	NNC	ENSG00000101004.15	novel	3801	23	NA	NA	-88	3883	at_least_one_novel_splicesite	TRUE	canonical	3	28	junction_5	30.3281314220899	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGACTCGTCTCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25585619	25477954	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_25479207_25480160_25480268_25481967_25482101_25489243_25489325_25489874_25490019_25491350_25491526_25496662_25496804_25498209_25498347_25500839_25501011_25503951_25504105_25504887_25505079_25510673_25510741_25512833_25513007_25517752_25517850_25526407_25526599_25585454
transcript_12699.nic	chr1	-	2657	7	NIC	ENSG00000134253.10	novel	3536	6	NA	NA	-3	0	intron_retention	FALSE	canonical	2	13	junction_1	26.0768096208106	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTGAAATCTGCATTGTA	-117120452	True	NA	-14	True	AATAAA	-22	NA	117121752	117111059	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_117111213_117112094_117112454_117113358_117113486_117115574_117115690_117116615_117116746_117118033_117118768_117120713
transcript_126992.known	chr20	-	3803	2	FSM	ENSG00000170191.5	ENST00000304788.4	3803	2	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTCTCCTCATCTCTTT	-25622931	True	NA	NA	False	AATAAA	-18	NA	25624014	25612934	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_25616582_25623858
transcript_126995.known	chr20	-	4237	5	FSM	ENSG00000130684.14	ENST00000252979.6	4237	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	6.97764286847643	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATCTGGGACACTGACAG	-25696168	True	NA	NA	False	ATTAAA	-16	NA	25696853	25673194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_25677038_25685566_25685663_25685995_25686123_25686390_25686467_25696758
transcript_127.known	SIRV4	-	570	5	FSM	SIRV4A	SIRV408	570	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3090.27210573762	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTGATATTTAGAGCGT	NA	False	NA	NA	False	NA	NA	NA	15122	8323	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV4_-_8373_8629_8748_8846_8991_13672_13829_15019
transcript_127000.known	chr20	+	320	2	FSM	ENSG00000226465.4	ENST00000376445.3	320	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATATTCTAAGAATGTAT	25751169	True	NA	NA	False	AGTAAA	-12	NA	25751217	25752761	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_25751339_25752562
transcript_127005.nic	chr20	-	1139	10	FSM	ENSG00000282826.3	ENST00000687441.1	1098	10	-43	2	-3	-1	multi-exon	FALSE	canonical	3	59	junction_1	41.4901445980299	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTTGAGTTGTTGTGAA	NA	False	NA	-4	True	AATAAA	-26	NA	28602859	28580633	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_28580745_28581918_28582030_28583018_28583111_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28601656_28601757_28602608
transcript_127008.known	chr20	-	769	9	FSM	ENSG00000282826.3	ENST00000358464.10	1025	9	180	76	50	-74	multi-exon	FALSE	canonical	3	59	junction_1	42.703739590345	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGATTTTTGTTTCTGTC	-28600675	False	NA	-33	True	AAAAAG	-37	NA	28602664	28580708	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_28580745_28581918_28582030_28583018_28583111_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28602608
transcript_12701.nic	chr1	-	2835	7	NIC	ENSG00000134253.10	novel	3536	6	NA	NA	-3	0	intron_retention	FALSE	canonical	3	9	junction_6	27.4631065653946	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTGAAATCTGCATTGTA	-117120452	True	NA	-14	True	AATAAA	-22	NA	117121752	117111059	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_117112454_117113358_117113486_117115574_117115690_117116615_117116746_117118033_117118768_117120713_117120902_117121605
transcript_127012.known	chr20	-	890	9	FSM	ENSG00000282826.3	ENST00000686258.1	976	9	83	3	8	0	multi-exon	FALSE	canonical	3	67	junction_1	43.8776708588776	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACGTGTGTGTATGCTTTT	-28600772	True	NA	0	True	TATAAA	-16	NA	28602761	28583024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_28583111_28583869_28583947_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28601656_28601757_28602608
transcript_127015.nic	chr20	-	871	8	FSM	ENSG00000282826.3	ENST00000686484.1	875	8	1	3	1	0	multi-exon	FALSE	canonical	3	61	junction_7	45.525503056764	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACGTGTGTGTATGCTTTT	-28600853	True	NA	0	True	TATAAA	-16	NA	28602842	28583024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_28583111_28583869_28583947_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28602608
transcript_12702.nic	chr1	-	1764	7	NIC	ENSG00000134253.10	novel	2415	7	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_6	27.4631065653946	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTTCAAGTGCTCTTT	-117121775	False	NA	-9	True	ATTAAA	-22	NA	117121806	117112184	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_117112454_117113358_117113486_117115574_117115690_117116615_117116746_117118033_117118768_117120713_117120902_117121605
transcript_127022.nic	chr20	-	351	2	ISM	ENSG00000282826.3	ENST00000687825.1	1203	7	-3	15739	-3	-15739	5prime_fragment	FALSE	canonical	3	69	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATCCTGAATGAATGTG	NA	False	NA	NA	False	NA	NA	NA	28602859	28601656	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_28601757_28602608
transcript_127027.nnic	chr20	+	702	6	NNC	ENSG00000149531.15	novel	761	9	NA	NA	-202	-2360	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	36.9269549245534	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGACATTCCAGAAGAAGA	30376072	True	NA	NA	False	AAAAAG	-15	NA	30377169	30396897	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_30377426_30379584_30379652_30388452_30388579_30391196_30391309_30393550_30393656_30396861
transcript_12703.known	chr1	-	3536	6	FSM	ENSG00000134253.10	ENST00000256649.9	3536	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	10.777754868246	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTGAAATCTGCATTGTA	-117120449	True	NA	-14	True	AATAAA	-22	NA	117121749	117111059	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_117112454_117113358_117113486_117115574_117115690_117116615_117116746_117118033_117118768_117120713
transcript_127031.nnic	chr20	+	634	5	NNC	ENSG00000149531.15	novel	761	9	NA	NA	-202	-5634	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	36.0485783353519	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAAACAGCAGGAGAAGAA	30376072	True	NA	NA	False	AATGAA	-23	NA	30377169	30393623	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_30377426_30379584_30379652_30388452_30388579_30391196_30391309_30393550
transcript_127035.known	chr20	+	1585	13	FSM	ENSG00000101294.18	ENST00000466766.2	1585	13	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	291.711651292848	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCCTCCCCGGGAGCCAG	31501604	True	NA	-24	True	AAGAAA	-11	NA	31514454	31569444	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_31514735_31527483_31527583_31527921_31528051_31538178_31538262_31544946_31545036_31549028_31549115_31549206_31549333_31550063_31550122_31554745_31554830_31559610_31559648_31561633_31561737_31566209_31566296_31569119
transcript_127036.known	chr20	+	1715	13	FSM	ENSG00000101294.18	ENST00000398174.9	1715	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	284.874485031956	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCGGGCCACTGTGCTCCT	31501591	True	NA	25	True	ATTAAA	-18	NA	31514441	31569543	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_31514735_31527483_31527583_31538178_31538262_31544946_31545036_31549028_31549115_31549206_31549333_31550063_31550122_31554745_31554830_31559610_31559648_31561633_31561737_31566209_31566296_31568077_31568225_31569119
transcript_127037.known	chr20	+	1809	13	FSM	ENSG00000101294.18	ENST00000674240.1	1809	13	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_11	266.26396676982	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTCTGTTTAAGCACCC	31501577	True	NA	49	True	ATTAAA	-42	NA	31514427	31569567	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_31514735_31527483_31527583_31538178_31538262_31544946_31545036_31549028_31549115_31549206_31549333_31550063_31550122_31554745_31554830_31559610_31559648_31561633_31561737_31566209_31566296_31568077_31568281_31569119
transcript_127039.known	chr20	+	1606	12	FSM	ENSG00000101294.18	ENST00000340852.9	1606	12	0	0	0	0	multi-exon	FALSE	canonical	3	640	junction_4	65.4784047423523	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTCTGTTTAAGCACCC	31501577	True	NA	49	True	ATTAAA	-42	NA	31514427	31569567	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_31514735_31527483_31527583_31538178_31538262_31544946_31545036_31549028_31549115_31549206_31549333_31550063_31550122_31554745_31554830_31559610_31559648_31561633_31561737_31566209_31566296_31569119
transcript_12704.known	chr1	-	3495	6	FSM	ENSG00000134253.10	ENST00000369464.7	3495	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	31.4922212617656	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTGAAATCTGCATTGTA	-117120462	True	NA	-14	True	AATAAA	-22	NA	117121762	117111059	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_117112454_117113358_117113486_117115574_117115690_117116615_117116746_117118087_117118768_117120713
transcript_127044.known	chr20	+	1655	12	FSM	ENSG00000101294.18	ENST00000650367.1	1655	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	304.177661222478	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCCACACCCTGCAGGCA	31501647	True	NA	-61	True	NA	NA	NA	31514497	31569407	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_31514735_31527483_31527583_31538178_31538555_31544946_31545036_31549028_31549115_31549206_31549333_31550063_31550122_31554759_31554830_31559610_31559648_31561633_31561737_31566209_31566296_31569119
transcript_127047.nic	chr20	+	1514	11	NIC	ENSG00000101294.18	novel	1606	12	NA	NA	-2	0	combination_of_known_junctions	TRUE	canonical	3	175	junction_10	176.486146765122	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGCGGGCCACTGTGCTC	31501557	True	NA	23	True	ATTAAA	-16	NA	31514407	31569541	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_31514735_31527483_31527583_31538178_31538262_31544946_31545036_31549028_31549115_31549206_31549333_31550063_31550122_31554745_31554830_31559610_31559648_31561633_31561737_31569119
transcript_12707.nic	chr1	+	2041	2	ISM	ENSG00000198162.12	ENST00000356554.7	8576	13	-756	126439	-756	-18197	5prime_fragment	FALSE	canonical	3	57	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAGAGGTAATAAGCTGA	NA	False	NA	28	True	NA	NA	NA	117366692	117402433	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_117368486_117402185
transcript_127078.known	chr20	+	757	7	FSM	ENSG00000101294.18	ENST00000494153.5	757	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	301.23159233756	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAGGCATCAGCATCGAA	31547062	False	NA	NA	False	NA	NA	NA	31548780	31569174	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_31549115_31550063_31550122_31554745_31554830_31559610_31559648_31561633_31561737_31566209_31566296_31569119
transcript_127083.known	chr20	+	3932	3	FSM	ENSG00000101294.18	ENST00000498035.5	3932	3	0	0	0	0	multi-exon	FALSE	canonical	3	743	junction_2	8	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGAGTTTTCTTAAATATTT	31501606	True	NA	8	True	ATTAAA	-18	NA	31514456	31541733	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_31514735_31527483_31527583_31538178
transcript_127089.known	chr20	+	670	1	FSM	ENSG00000101898.6	ENST00000394552.3	670	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGATATTGATTGTGTCGT	31545693	True	NA	NA	False	TATAAA	-36	NA	31547411	31548081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_31547400_31548100
transcript_12709.nic	chr1	-	2206	15	NIC	ENSG00000196505.11	novel	8819	14	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	17.7449331658709	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATATACAGAACCAATGT	-117928382	True	NA	-31	True	NA	NA	NA	117929641	117870183	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_117870617_117877775_117877842_117878008_117878153_117881822_117881878_117883487_117883628_117886576_117886654_117887697_117887775_117896832_117896990_117899056_117899217_117906505_117906583_117911993_117912083_117912529_117912684_117918596_117918737_117920181_117920425_117929447
transcript_127092.known	chr20	+	983	2	FSM	ENSG00000125968.9	ENST00000376112.4	983	2	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_1	0	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGTTGTAGTGACTTCT	31596266	True	NA	12	True	ATTAAA	-19	NA	31605288	31606510	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_31605814_31606052
transcript_127093.known	chr20	+	1233	1	FSM	ENSG00000125968.9	ENST00000376105.4	1233	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTAGTGACTTCTTGGGT	31596260	True	NA	17	True	ATTAAA	-24	NA	31605282	31606515	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_31605300_31606500
transcript_127095.known	chr20	-	3257	4	FSM	ENSG00000171552.14	ENST00000678671.1	3257	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	67.4899169423766	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGAGGGGCATCTGCCCC	-31722038	False	1491	NA	False	NA	NA	NA	31723529	31664574	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_31666087_31666990_31667148_31721654_31722331_31722617
transcript_127096.nnic	chr20	-	2467	3	NNC	ENSG00000171552.14	novel	2373	3	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	161	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGGCTCTTGTGTGCTC	-31721081	False	NA	NA	False	AATAAA	-25	NA	31722572	31664451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_31666087_31721654_31722331_31722416
transcript_127097.known	chr20	-	2441	3	FSM	ENSG00000171552.14	ENST00000434194.2	2441	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	174.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	-31721075	False	2800	NA	False	AATAAA	-14	NA	31722566	31664462	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_31666087_31721654_31722349_31722443
transcript_127098.known	chr20	-	2373	3	FSM	ENSG00000171552.14	ENST00000677194.1	2373	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	175	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	-31721058	False	2800	NA	False	AATAAA	-14	NA	31722549	31664462	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_31666087_31721654_31722331_31722476
transcript_127099.known	chr20	-	3212	3	FSM	ENSG00000171552.14	ENST00000676582.1	3212	3	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_2	102	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	-31722038	False	1491	NA	False	AATAAA	-14	NA	31723529	31664462	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_31666087_31721654_31722331_31722617
transcript_127100.known	chr20	-	2544	3	FSM	ENSG00000171552.14	ENST00000678563.1	2544	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	155.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	-31722487	False	NA	NA	False	AATAAA	-14	NA	31723978	31664462	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_31666087_31721654_31722331_31723734
transcript_127101.known	chr20	-	2426	3	FSM	ENSG00000171552.14	ENST00000439267.2	2426	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	155	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	NA	False	NA	NA	False	AATAAA	-14	NA	31723989	31664462	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_31666087_31721654_31722331_31723863
transcript_127102.known	chr20	-	2574	3	FSM	ENSG00000171552.14	ENST00000307677.5	2574	3	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	125	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGAGCCTGGGCTCTTGT	-31720068	True	NA	NA	False	AATAAA	-19	NA	31722868	31664457	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_31666087_31721654_31722349_31722617
transcript_127105.known	chr20	-	2227	3	FSM	ENSG00000171552.14	ENST00000422920.2	2227	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	64.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTAGGGTGGCCCTTGC	-31722038	False	1491	NA	False	GGGGCT	-26	NA	31723529	31665258	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_31666087_31721843_31722331_31722617
transcript_127108.known	chr20	-	2496	3	FSM	ENSG00000171552.14	ENST00000376055.9	2496	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	41.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGGCTCTTGTGTGCTC	-31721482	False	NA	NA	False	AATAAA	-25	NA	31722973	31664451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_31666087_31721843_31722349_31722617
transcript_127109.known	chr20	-	2578	2	FSM	ENSG00000171552.14	ENST00000376062.6	2578	2	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGGCTCTTGTGTGCTC	-31721106	False	NA	NA	False	AATAAA	-25	NA	31722597	31664451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_31666087_31721654
transcript_12711.known	chr1	-	8819	14	FSM	ENSG00000196505.11	ENST00000369443.10	8819	14	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_1	9.44996164796075	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGCTCAACTTAGCATTA	-117928362	True	NA	-21	True	AGTAAA	-16	NA	117929621	117863484	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_117870617_117878008_117878153_117881822_117881878_117883487_117883628_117886576_117886654_117887697_117887775_117896832_117896990_117899056_117899217_117906505_117906583_117911993_117912083_117912529_117912684_117918596_117918737_117920181_117920425_117929447
transcript_127112.known	chr20	+	3605	19	FSM	ENSG00000088325.16	ENST00000340513.4	3605	19	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_10	319.360322257006	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTATTTGATGTTTTT	31720969	True	NA	25	True	AATAAA	-25	NA	31739270	31801805	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_31739622_31742540_31742648_31757406_31757583_31760056_31760180_31766555_31766683_31770342_31770472_31771559_31771683_31775866_31775989_31777486_31777639_31778812_31778985_31780938_31781047_31782248_31782391_31783704_31783922_31792734_31792831_31793847_31794025_31794401_31794549_31797403_31797516_31798364_31798553_31800969
transcript_127118.known	chr20	+	3473	18	FSM	ENSG00000088325.16	ENST00000300403.11	3473	18	0	0	0	0	multi-exon	FALSE	canonical	3	807	junction_1	80.692247176078	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTGTGTTATTTGATG	31720988	True	NA	20	True	AATAAA	-20	NA	31739289	31801800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_31739622_31742540_31742648_31757406_31757583_31760056_31760180_31766555_31766683_31770342_31770472_31771559_31771683_31775866_31775989_31777486_31777639_31778812_31778985_31782248_31782391_31783704_31783922_31792734_31792831_31793847_31794025_31794401_31794549_31797403_31797516_31798364_31798553_31800969
transcript_127121.nnic	chr20	+	3519	18	NNC	ENSG00000088325.16	novel	3473	18	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	canonical	3	118	junction_16	225.085020461127	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTGTGTTATTTGATG	NA	False	NA	20	True	AATAAA	-20	NA	31739222	31801800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_31739622_31742540_31742648_31757406_31757583_31760056_31760180_31766555_31766683_31770342_31770472_31771559_31771683_31775866_31775989_31777486_31777639_31778812_31778985_31782248_31782391_31783704_31783922_31792734_31792831_31793847_31794025_31794401_31794549_31797403_31797516_31798385_31798553_31800969
transcript_127131.nnic	chr20	+	3420	17	NIC	ENSG00000088325.16	novel	3473	18	NA	NA	-35	0	combination_of_known_splicesites	FALSE	canonical	3	61	junction_1	242.071456069794	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTGTGTTATTTGATG	NA	False	NA	20	True	AATAAA	-20	NA	31739235	31801800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_31739622_31757406_31757583_31760056_31760180_31766555_31766683_31770342_31770472_31771559_31771683_31775866_31775989_31777486_31777639_31778812_31778985_31782248_31782391_31783704_31783922_31792734_31792831_31793847_31794025_31794401_31794549_31797403_31797516_31798364_31798553_31800969
transcript_127139.nic	chr20	+	2502	16	ISM	ENSG00000088325.16	ENST00000300403.11	3473	18	-67	4304	-48	-4304	5prime_fragment	FALSE	canonical	3	807	junction_1	75.3939579070424	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGAAATCAGTTGCTGG	NA	False	NA	NA	False	AAGAAA	-1	NA	31739222	31797496	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_31739622_31742540_31742648_31757406_31757583_31760056_31760180_31766555_31766683_31770342_31770472_31771559_31771683_31775866_31775989_31777486_31777639_31778812_31778985_31782248_31782391_31783704_31783922_31792734_31792831_31793847_31794025_31794401_31794549_31797403
transcript_127145.nic	chr20	+	2244	14	ISM	ENSG00000088325.16	ENST00000300403.11	3473	18	-67	7794	-48	-7794	5prime_fragment	FALSE	canonical	3	807	junction_1	79.9892744289423	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGCAGAAAGGGGAGGT	NA	False	NA	32	True	AATAAA	-2	NA	31739222	31794006	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_31739622_31742540_31742648_31757406_31757583_31760056_31760180_31766555_31766683_31770342_31770472_31771559_31771683_31775866_31775989_31777486_31777639_31778812_31778985_31782248_31782391_31783704_31783922_31792734_31792831_31793847
transcript_127172.known	chr20	-	1302	1	FSM	ENSG00000179772.8	ENST00000375978.5	1302	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCAGCTTGCCTGATGGC	-31845591	True	NA	NA	False	AATAAA	-16	NA	31845604	31844302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_31844300_31845600
transcript_127173.known	chr20	-	1256	7	FSM	ENSG00000149599.16	ENST00000398084.6	1256	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGTGCCTCCCAGTCATTC	-31870158	False	122	0	True	ATTAAA	-25	NA	31870280	31861066	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_31861676_31862570_31862743_31863906_31863982_31864952_31865003_31867070_31867154_31869563_31869598_31870047
transcript_127174.known	chr20	-	1224	7	FSM	ENSG00000149599.16	ENST00000339738.10	1224	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1.24721912892465	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTCCGAGTGCCTC	-31870405	True	NA	-10	True	ATTAAA	-15	NA	31870527	31861076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_31861676_31862570_31862743_31863906_31863982_31864952_31865003_31867070_31867154_31869563_31869598_31870316
transcript_127176.known	chr20	-	1957	5	FSM	ENSG00000088356.6	ENST00000202017.6	1957	5	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_2	24.8935232540514	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGATGTTGTCCAGTGTGA	-31947811	True	NA	0	True	AATAAA	-26	NA	31952046	31944336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_31945890_31946495_31946577_31948807_31948883_31950311_31950388_31951874
transcript_127182.nic	chr20	-	334	3	ISM	ENSG00000088356.6	ENST00000202017.6	1957	5	-28	4488	-28	-4488	5prime_fragment	FALSE	canonical	3	412	junction_1	3	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATGATTGAAAAAGGTA	-31947839	True	NA	-16	True	NA	NA	NA	31952074	31948824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_31948883_31950311_31950388_31951874
transcript_12719.nic	chr1	-	2149	11	ISM	ENSG00000196505.11	ENST00000369442.3	2436	13	-115	5682	-77	0	5prime_fragment	FALSE	canonical	3	52	junction_4	5.40462764674866	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATAAAAAGTGGCACTCA	-117928439	False	NA	NA	False	NA	NA	NA	117929698	117882903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_117883628_117886576_117886654_117887697_117887775_117896832_117896990_117899056_117899217_117906505_117906583_117911993_117912083_117912529_117912684_117918596_117918737_117920181_117920425_117929447
transcript_127193.known	chr20	+	1742	13	FSM	ENSG00000101336.18	ENST00000518730.5	1742	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	2.89035753267077	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGGAGGACCAGGGCAGGG	32052188	True	NA	NA	False	NA	NA	NA	32052260	32101519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_32052487_32071661_32071783_32073318_32073362_32073718_32073819_32074622_32074722_32079773_32079878_32083893_32084044_32084390_32084544_32086627_32086808_32088567_32088645_32093862_32094017_32099003_32099136_32101316
transcript_127207.known	chr20	+	3768	18	FSM	ENSG00000101337.16	ENST00000398022.7	3768	18	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	30.1738904985762	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGTCTTGAATCTCAT	32103309	True	NA	13	True	AATAAA	-17	NA	32109713	32167256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_32109756_32133012_32133127_32136073_32136174_32141496_32141666_32141765_32141896_32142981_32143106_32145090_32145210_32145311_32145424_32146784_32146856_32149633_32149767_32150621_32150704_32150799_32150876_32155102_32155187_32157793_32157970_32158450_32158515_32159991_32160112_32161275_32161366_32165294
transcript_127209.nnic	chr20	+	2085	18	NNC	ENSG00000101337.16	novel	3768	18	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_17	69.6521262067506	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTTTGTCTTGAATCTC	32103312	True	NA	11	True	AATAAA	-15	NA	32109716	32167254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_32109756_32133012_32133127_32136073_32136174_32141496_32141666_32141765_32141896_32142981_32143106_32145090_32145210_32145311_32145424_32146784_32146856_32149633_32149767_32150621_32150704_32150799_32150876_32155102_32155187_32157793_32157970_32158450_32158515_32159991_32160112_32161275_32161366_32166972
transcript_127223.nnic	chr20	+	3512	16	NNC	ENSG00000101337.16	novel	3768	18	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_6	72.5238351624255	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGTCTTGAATCTCAT	32103306	True	NA	13	True	AATAAA	-17	NA	32109710	32167256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_32109756_32133012_32133127_32136073_32136174_32141496_32141666_32141765_32141896_32142981_32143078_32146784_32146856_32149633_32149767_32150621_32150704_32150799_32150876_32155102_32155187_32157793_32157970_32158450_32158515_32159991_32160112_32161275_32161366_32165294
transcript_127234.known	chr20	-	3884	1	FSM	ENSG00000235217.6	ENST00000565928.1	3884	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGATCATGTCACTTCCC	-32189534	True	NA	-3	True	AATAAA	-27	NA	32190360	32186476	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_32186500_32190400
transcript_127235.known	chr20	-	5656	3	FSM	ENSG00000126003.7	ENST00000246229.5	5656	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	10	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGTTGTGAACCTGTCT	-32205711	True	NA	-4	True	ATTAAA	-20	NA	32207743	32192503	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_32197683_32201918_32202293_32207640
transcript_127241.known	chr20	+	5226	7	FSM	ENSG00000101346.14	ENST00000375749.8	5226	7	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_6	5.79511288357124	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACATTTTACCAGTCTAG	32204673	True	NA	28	True	AATAAA	-42	NA	32207879	32238658	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_32208066_32210070_32210193_32215268_32215452_32216608_32216722_32228262_32228456_32230818_32231062_32234472
transcript_127248.known	chr20	+	959	6	FSM	ENSG00000101346.14	ENST00000486717.5	959	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	54.5989010878424	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCTTTGTGAAGCGGGA	32204728	True	NA	NA	False	NA	NA	NA	32207934	32234568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_32208066_32215268_32215452_32216608_32216722_32228262_32228456_32230818_32231062_32234472
transcript_127250.nic	chr20	+	2670	4	ISM	ENSG00000101346.14	ENST00000375730.3	1507	5	-51	-826	-38	826	intron_retention	FALSE	canonical	3	139	junction_1	3.39934634239519	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCACCAACTCTAAAAGCAA	32204635	True	NA	NA	False	AAAAAG	-13	NA	32207841	32218749	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_32208066_32210070_32210193_32215268_32215452_32216608
transcript_127253.known	chr20	+	6116	9	FSM	ENSG00000101350.8	ENST00000375712.4	6116	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	4.56720647661128	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTCCTCATAAATGACTA	32276368	True	NA	21	True	AATAAA	-31	NA	32277650	32335011	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_32277766_32309712_32311182_32316217_32316320_32316526_32316650_32316755_32316875_32326770_32326885_32327555_32327662_32330140_32330320_32331222
transcript_127255.known	chr20	-	5991	8	FSM	ENSG00000197183.15	ENST00000359676.9	5991	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	14.2728513519298	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTGCTTCCACTGTGTC	-32481144	True	NA	NA	False	AATAAA	-20	NA	32483471	32443058	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_32447817_32452235_32452438_32452883_32453007_32453303_32453496_32453575_32453762_32456117_32456396_32474600_32474743_32483361
transcript_127258.known	chr20	-	701	3	FSM	ENSG00000197183.15	ENST00000326071.8	701	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	0.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACCTGTTTCTTTATTA	-32481255	True	NA	NA	False	AATAAA	-19	NA	32483582	32464779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_32465118_32474600_32474743_32483361
transcript_127259.nnic	chr20	-	2995	9	FSM	ENSG00000149600.12	ENST00000278980.11	1362	9	-508	-1125	-508	1125	multi-exon	FALSE	canonical	3	485	junction_3	26.6552058705237	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTCTTCTCCCTTGTCTC	-32743962	False	NA	-11	True	AGTAAA	-7	NA	32743975	32701573	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_32703459_32704022_32704072_32704439_32704490_32704813_32704905_32706582_32706621_32706703_32706761_32727892_32727996_32728088_32728143_32743307
transcript_12726.known	chr1	+	10004	27	FSM	ENSG00000065183.16	ENST00000349139.6	10004	27	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	59.5951454478194	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCCTCACTCGTGTAA	117920309	True	NA	8	True	AATAAA	-24	NA	117929738	117966543	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_117929783_117933287_117933491_117934472_117934683_117936768_117936888_117938479_117938559_117939476_117939573_117940826_117940941_117941123_117941226_117941749_117941848_117942436_117942545_117943395_117943627_117946085_117946180_117948404_117948507_117949750_117949837_117949994_117950131_117950833_117950891_117951975_117952077_117952296_117952409_117952527_117952663_117952945_117952997_117953475_117953542_117954006_117954100_117954579_117954628_117955314_117955359_117957067_117957197_117958909_117959004_117959291
transcript_127260.nic	chr20	-	1593	8	ISM	ENSG00000149600.12	ENST00000278980.11	1362	9	-508	841	-508	-837	5prime_fragment	FALSE	canonical	3	485	junction_2	28.4604989415154	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCCGGGTGGAAATTAAT	-32743962	False	NA	NA	False	AAAAAG	-11	NA	32743975	32703539	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_32704072_32704439_32704490_32704813_32704905_32706582_32706621_32706703_32706761_32727892_32727996_32728088_32728143_32743307
transcript_127262.known	chr20	-	1343	9	FSM	ENSG00000149600.12	ENST00000446419.6	1343	9	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_8	141.912329890676	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTCTGGATCCAGTTG	-32740746	True	NA	-55	True	AATAAA	-13	NA	32743455	32702702	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_32703459_32704022_32704072_32704439_32704490_32704813_32704905_32706582_32706621_32706703_32706761_32727892_32727996_32728088_32728140_32743307
transcript_127268.nic	chr20	-	2444	8	ISM	ENSG00000285382.1	ENST00000642484.1	2695	10	-466	70520	-422	-70520	5prime_fragment	FALSE	canonical	3	485	junction_2	28.4604989415154	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTCTGGATCCAGTTG	-32743976	False	NA	-55	True	AATAAA	-13	NA	32743989	32702702	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_32704072_32704439_32704490_32704813_32704905_32706582_32706621_32706703_32706761_32727892_32727996_32728088_32728143_32743307
transcript_127291.known	chr20	+	4336	23	FSM	ENSG00000088305.18	ENST00000328111.6	4336	23	0	0	0	0	multi-exon	FALSE	canonical	3	1247	junction_1	326.140418093265	1723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTCTGATGTCCCTTT	32707443	True	NA	23	True	ATTAAA	-16	NA	32762384	32809356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_32762700_32780317_32780466_32781352_32781415_32784757_32784860_32786501_32786628_32787229_32787452_32788853_32789013_32791600_32791709_32792625_32792771_32793535_32793596_32795408_32795535_32795649_32795695_32796789_32796870_32797186_32797300_32798459_32798644_32799243_32799329_32800152_32800299_32800834_32800926_32801277_32801427_32802384_32802471_32805337_32805408_32806208_32806328_32807761
transcript_12730.nic	chr1	+	3374	27	NIC	ENSG00000065183.16	novel	10004	27	NA	NA	2	-6785	combination_of_known_junctions	TRUE	canonical	3	156	junction_1	60.0199177985473	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTTTCATTGGAGTTG	117920296	True	NA	13	True	AATAAA	-18	NA	117929725	117959758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_117929925_117933287_117933491_117934472_117934683_117936768_117936888_117938479_117938559_117939476_117939573_117940826_117940941_117941123_117941226_117941749_117941848_117942436_117942545_117943395_117943627_117946085_117946180_117948404_117948507_117949750_117949837_117949994_117950131_117950833_117950891_117951975_117952077_117952296_117952409_117952527_117952663_117952945_117952997_117953475_117953542_117954006_117954100_117954579_117954628_117955314_117955359_117957067_117957197_117958909_117959004_117959291
transcript_127303.known	chr20	+	4237	22	FSM	ENSG00000088305.18	ENST00000353855.6	4237	22	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_9	483.314989095939	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTCTGATGTCCCTTT	32707482	True	NA	23	True	ATTAAA	-16	NA	32762423	32809356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_32762700_32780317_32780466_32781352_32781415_32784757_32784860_32786501_32786628_32787229_32787452_32788853_32789013_32791600_32791709_32792625_32792771_32795408_32795535_32795649_32795695_32796789_32796870_32797186_32797300_32798459_32798644_32799243_32799329_32800152_32800299_32800834_32800926_32801277_32801427_32802384_32802471_32805337_32805408_32806208_32806328_32807761
transcript_12731.nic	chr1	+	3676	27	NIC	ENSG00000065183.16	novel	10004	27	NA	NA	2	-6483	combination_of_known_junctions	FALSE	canonical	3	156	junction_1	60.0199177985473	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGCCAAGCTAAGATGCCT	117920296	True	NA	16	True	AATAAA	-22	NA	117929725	117960060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_117929925_117933287_117933491_117934472_117934683_117936768_117936888_117938479_117938559_117939476_117939573_117940826_117940941_117941123_117941226_117941749_117941848_117942436_117942545_117943395_117943627_117946085_117946180_117948404_117948507_117949750_117949837_117949994_117950131_117950833_117950891_117951975_117952077_117952296_117952409_117952527_117952663_117952945_117952997_117953475_117953542_117954006_117954100_117954579_117954628_117955314_117955359_117957067_117957197_117958909_117959004_117959291
transcript_127311.known	chr20	+	4255	22	FSM	ENSG00000088305.18	ENST00000201963.3	4255	22	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_1	587.074263169653	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTCTGATGTCCCTTT	NA	False	NA	23	True	ATTAAA	-16	NA	32779851	32809356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_32780146_32780317_32780466_32781352_32781415_32784757_32784860_32786501_32786628_32787229_32787452_32788853_32789013_32791600_32791709_32792625_32792771_32795408_32795535_32795649_32795695_32796789_32796870_32797186_32797300_32798459_32798644_32799243_32799329_32800152_32800299_32800834_32800926_32801277_32801427_32802384_32802471_32805337_32805408_32806208_32806328_32807761
transcript_127317.nic	chr20	+	4158	21	NIC	ENSG00000088305.18	novel	4336	23	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	263	junction_20	445.45991963363	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTCTGATGTCCCTTT	32762343	False	NA	23	True	ATTAAA	-16	NA	32762373	32809356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_32762700_32780317_32780466_32781352_32781415_32784757_32784860_32786501_32786628_32787229_32787452_32788853_32789013_32791600_32791709_32792625_32792771_32793535_32793596_32795408_32795535_32795649_32795695_32796789_32796870_32797186_32797300_32798459_32798644_32799243_32799329_32800152_32800299_32800834_32800926_32801277_32801427_32802384_32802471_32807761
transcript_127339.known	chr20	+	4048	20	FSM	ENSG00000088305.18	ENST00000348286.6	4048	20	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_9	572.018605745092	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTCTGATGTCCCTTT	32707482	True	NA	23	True	ATTAAA	-16	NA	32762423	32809356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_32762700_32780317_32780466_32781352_32781415_32784757_32784860_32786501_32786628_32787229_32787452_32788853_32789013_32791600_32791709_32792625_32792771_32795408_32795535_32795649_32795695_32796789_32796870_32797186_32797300_32798459_32798644_32799243_32799329_32800152_32800299_32800834_32800926_32801277_32801427_32802384_32802471_32807761
transcript_127364.nic	chr20	+	2217	10	ISM	ENSG00000088305.18	ENST00000328111.6	4336	23	0	14991	0	-13704	5prime_fragment	FALSE	canonical	3	1247	junction_1	126.229948902786	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAAAACAGAAACAAAAAAG	32707443	True	NA	NA	False	NA	NA	NA	32762384	32794365	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_32762700_32780317_32780466_32781352_32781415_32784757_32784860_32786501_32786628_32787229_32787452_32788853_32789013_32791600_32791709_32792625_32792771_32793535
transcript_127385.known	chr20	+	2562	7	FSM	ENSG00000101367.9	ENST00000375571.6	2562	7	0	0	0	0	multi-exon	FALSE	canonical	3	1428	junction_3	113.811857417797	928	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTCTTCTGAAATTTGT	32797887	True	NA	19	True	AATAAA	-20	NA	32819953	32850405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_32820029_32825924_32826049_32833716_32833863_32836633_32836842_32839734_32839857_32846617_32846771_32848671
transcript_127397.known	chr20	+	2131	1	FSM	ENSG00000260257.2	ENST00000569087.2	2131	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAATGGTTCTGTGATT	32856606	False	NA	10	True	AATAAA	-20	NA	32856620	32858751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_32856600_32858800
transcript_127399.known	chr20	-	2164	15	FSM	ENSG00000101391.21	ENST00000357886.8	2164	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	126.927345439855	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	-33394955	True	NA	-15	True	ATTAAA	-21	NA	33401561	33358838	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33374114_33374213_33379460_33379692_33383479_33383522_33385649_33385771_33387322_33387534_33392141_33392243_33394031_33394067_33395012_33395117_33396760_33397085_33401427
transcript_127404.nnic	chr20	-	1881	14	NNC	ENSG00000101391.21	novel	2164	15	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_13	96.5166080076469	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	-33394946	True	NA	-15	True	ATTAAA	-21	NA	33401552	33358838	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33374114_33374213_33379460_33379692_33385649_33385771_33387322_33387534_33392141_33392243_33394031_33394067_33395012_33395117_33396760_33396853_33401427
transcript_127405.known	chr20	-	1930	14	FSM	ENSG00000101391.21	ENST00000473997.5	1930	14	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_13	99.441517409055	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	-33394911	True	NA	-15	True	ATTAAA	-21	NA	33401517	33358838	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33374114_33374213_33379460_33379692_33385649_33385771_33387322_33387534_33392141_33392243_33394031_33394067_33395012_33395117_33396760_33396937_33401427
transcript_127406.known	chr20	-	2080	14	FSM	ENSG00000101391.21	ENST00000346416.7	2080	14	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_9	41.6312354286251	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	-33394913	True	NA	-15	True	ATTAAA	-21	NA	33401519	33358838	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33374114_33374213_33379460_33379692_33385649_33385771_33387322_33387534_33392141_33392243_33394031_33394067_33395012_33395117_33396760_33397085_33401427
transcript_12741.nic	chr1	+	1781	9	ISM	ENSG00000065183.16	ENST00000349139.6	10004	27	-775	24755	-756	0	5prime_fragment	FALSE	canonical	3	159	junction_1	84.411843807608	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGGAAATTCAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	117928963	117941788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_117929783_117933287_117933491_117934472_117934683_117936768_117936888_117938479_117938559_117939476_117939573_117940826_117940941_117941123_117941226_117941749
transcript_127415.known	chr20	-	1891	13	FSM	ENSG00000101391.21	ENST00000339269.5	1891	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	103.497584512876	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	-33394955	True	NA	-15	True	ATTAAA	-21	NA	33401561	33358838	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33374114_33374213_33385649_33385771_33387322_33387534_33392141_33392243_33394031_33394067_33395012_33395117_33396760_33397085_33401427
transcript_127418.nic	chr20	-	1686	12	NIC	ENSG00000101391.21	novel	2164	15	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_11	106.131526072352	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	-33394947	True	NA	-15	True	ATTAAA	-21	NA	33401553	33358838	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33374114_33374213_33379460_33379692_33385649_33385771_33387322_33387534_33392141_33392243_33394031_33394067_33401427
transcript_12742.nic	chr1	+	1161	9	NIC	ENSG00000065183.16	novel	10004	27	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	156	junction_1	85.2701589068532	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGGAAATTCAGAAGAA	117920296	True	NA	NA	False	NA	NA	NA	117929725	117941788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_117929925_117933287_117933491_117934472_117934683_117936768_117936888_117938479_117938559_117939476_117939573_117940826_117940941_117941123_117941226_117941749
transcript_127425.nic	chr20	-	1651	11	NIC	ENSG00000101391.21	novel	2164	15	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_10	105.648284415792	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	-33394947	True	NA	-15	True	ATTAAA	-21	NA	33401553	33358838	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33374114_33374213_33379460_33379692_33385649_33385771_33387322_33387534_33392141_33392243_33401427
transcript_127442.nnic	chr20	-	2243	8	NNC	ENSG00000101400.6	novel	2211	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	14.6524358913807	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGGTCTGTGCCTTGGC	-33443749	False	NA	-1	True	AATAAA	-35	NA	33443763	33407956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_33408600_33408700_33408889_33410102_33410332_33412295_33412427_33412574_33412783_33417718_33417924_33438840_33439027_33443310
transcript_127444.known	chr20	-	2211	8	FSM	ENSG00000101400.6	ENST00000217381.3	2211	8	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	6.79735843049733	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGGTCTGTGCCTTGGC	-33443749	False	NA	-1	True	AATAAA	-35	NA	33443763	33407956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_33408600_33408700_33408889_33410134_33410332_33412295_33412427_33412574_33412783_33417718_33417924_33438840_33439027_33443310
transcript_127453.known	chr20	+	7617	12	FSM	ENSG00000078699.22	ENST00000375279.6	7617	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	49.0863634259064	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAAGCTGGAATGGGACC	33486182	True	NA	24	True	AATAAA	-21	NA	33490116	33650036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_33490302_33573973_33574262_33606955_33607100_33611093_33611336_33619516_33619607_33623114_33623297_33624763_33625018_33628349_33628436_33629718_33629915_33636639_33636709_33640340_33640532_33644346
transcript_127466.known	chr20	+	7344	11	FSM	ENSG00000078699.22	ENST00000342704.11	7344	11	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_9	32.1280251493925	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCCTCAAGCTGGAAT	33486161	True	NA	18	True	AATAAA	-15	NA	33490095	33650030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_33490302_33606955_33607100_33611093_33611336_33619516_33619607_33623114_33623297_33624763_33625018_33628349_33628436_33629718_33629915_33636639_33636709_33640340_33640532_33644346
transcript_127473.nnic	chr20	+	2551	10	NIC	ENSG00000078699.22	novel	7344	11	NA	NA	-30	-1414	combination_of_known_splicesites	FALSE	canonical	3	10	junction_3	42.3917648653021	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCCCCACATCACAGATG	NA	False	NA	-9	True	AATAAA	-37	NA	33490044	33645276	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_33490302_33606955_33607100_33611093_33611336_33623114_33623297_33624763_33625018_33628349_33628436_33629718_33629915_33636639_33636709_33640340_33640532_33644346
transcript_127476.nic	chr20	+	1097	6	NIC	ENSG00000078699.22	novel	7344	11	NA	NA	-30	0	combination_of_known_junctions	TRUE	canonical	3	21	junction_5	52.1750898418009	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	33490044	33623954	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_33490302_33606955_33607100_33611093_33611336_33619516_33619607_33623114_33623297_33623772
transcript_127478.nic	chr20	+	1618	5	ISM	ENSG00000078699.22	ENST00000342704.11	7344	11	-51	26031	-30	45	5prime_fragment	FALSE	canonical	3	128	junction_4	17.3997126413053	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAATCTGCCAAATGCCTT	NA	False	NA	NA	False	AAAAAG	-31	NA	33490044	33623999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_33490302_33606955_33607100_33611093_33611336_33619516_33619607_33623114
transcript_127488.known	chr20	-	1942	13	FSM	ENSG00000125967.17	ENST00000375238.8	1942	13	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_11	16.570346673769	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGCCTCCTGTCTCGCA	-33673099	True	NA	-4	True	AATAAA	-18	NA	33674463	33657086	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_33657858_33657941_33658034_33658476_33658555_33658721_33658835_33659496_33659551_33659652_33659733_33659884_33660004_33660258_33660396_33669374_33669473_33669686_33669713_33670683_33670793_33672397_33672423_33674223
transcript_127496.nic	chr20	-	2162	12	NIC	ENSG00000125967.17	novel	1942	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	48	junction_10	17.1416075892491	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGCCTCCTGTCTCGCA	-33673064	True	NA	-4	True	AATAAA	-18	NA	33674428	33657086	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_33657858_33657941_33658034_33658476_33658555_33658721_33658835_33659496_33659551_33659652_33659733_33659884_33660396_33669374_33669473_33669686_33669713_33670683_33670793_33672397_33672423_33674223
transcript_127497.known	chr20	-	2009	12	FSM	ENSG00000125967.17	ENST00000246190.11	2009	12	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_10	17.1887912738082	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGCCTCCTGTCTCGCA	-33673064	True	NA	-4	True	AATAAA	-18	NA	33674428	33657086	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_33657858_33657941_33658034_33658476_33658555_33658721_33658835_33659496_33659733_33659884_33660004_33660258_33660396_33669374_33669473_33669686_33669713_33670683_33670793_33672397_33672423_33674223
transcript_127498.nic	chr20	-	1845	12	NIC	ENSG00000125967.17	novel	1942	13	NA	NA	0	0	intron_retention	TRUE	canonical	3	10	junction_4	23.4026910934025	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGCCTCCTGTCTCGCA	-33673056	True	NA	-4	True	AATAAA	-18	NA	33674420	33657086	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_33657858_33657941_33658034_33658476_33658555_33658721_33658835_33659652_33659733_33659884_33660004_33660258_33660396_33669374_33669473_33669686_33669713_33670683_33670793_33672397_33672423_33674223
transcript_12750.known	chr1	-	2787	6	FSM	ENSG00000116874.12	ENST00000235521.5	2787	6	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	10.4115320678563	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTGTTTATCTGTTTGT	-119139490	True	NA	-3	True	ACTAAA	-20	NA	119140653	119031215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_119033360_119034094_119034214_119042263_119042350_119045581_119045663_119076349_119076608_119140554
transcript_127512.known	chr20	-	827	9	FSM	ENSG00000125967.17	ENST00000478237.5	827	9	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_8	23.8009322296418	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGACTTGGGCCTGGTGG	-33662149	False	NA	NA	False	NA	NA	NA	33662237	33657729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_33657858_33657941_33658034_33658476_33658555_33658721_33658835_33659496_33659551_33659652_33659733_33659884_33660004_33660258_33660396_33662211
transcript_127519.known	chr20	-	1277	8	FSM	ENSG00000125967.17	ENST00000483813.5	1277	8	0	0	0	0	multi-exon	TRUE	canonical	2	15	junction_7	25.426163609919	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTCCCTGCCTGGCTG	-33662331	False	NA	NA	False	NA	NA	NA	33662419	33657563	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_33657858_33657941_33658034_33658476_33658555_33658721_33658835_33659496_33659733_33659884_33660004_33660258_33660396_33662211
transcript_12752.known	chr1	-	2811	6	FSM	ENSG00000116874.12	ENST00000369426.9	2811	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	39.3314123824711	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTGTTTATCTGTTTGT	-119139485	True	NA	-3	True	ACTAAA	-20	NA	119140648	119031215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_119033389_119034094_119034214_119042263_119042350_119045581_119045663_119076349_119076608_119140554
transcript_127523.known	chr20	+	1583	1	FSM	ENSG00000288649.2	ENST00000677665.1	1583	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATATGGGAGTTCCTCCA	33666864	True	NA	28	True	AATAAA	-28	NA	33666942	33668525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_33666900_33668500
transcript_127524.known	chr20	-	2142	12	FSM	ENSG00000125967.17	ENST00000488489.5	2142	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	25.882442435873	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTTGCCTCCTGTCTCGC	-33673056	True	NA	-5	True	AATAAA	-17	NA	33674420	33657087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_33657858_33657941_33658034_33658476_33658555_33658721_33658835_33659496_33659551_33659652_33659733_33659884_33660396_33669374_33669473_33669686_33669713_33670683_33670782_33672397_33672423_33674223
transcript_127529.known	chr20	-	2690	7	FSM	ENSG00000101412.13	ENST00000343380.6	2690	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	93.9053897400049	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCTATTCAGTGCTGCC	-33682218	True	NA	NA	False	AGTAAA	-23	NA	33686385	33675476	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_33676980_33677104_33677331_33677425_33677541_33678200_33678354_33679754_33679975_33680325_33680417_33686003
transcript_127530.nnic	chr20	-	2256	7	NNC	ENSG00000101412.13	novel	2690	7	NA	NA	-44	-208	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	117.773794481908	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGCCGGGTTTTGGGAC	-33682262	True	NA	-11	True	AATAAA	-14	NA	33686429	33675684	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_33676980_33677104_33677331_33677425_33677541_33678200_33678354_33679754_33679975_33680325_33680417_33686273
transcript_127533.nic	chr20	-	2652	6	NIC	ENSG00000101412.13	novel	2690	7	NA	NA	-44	-207	intron_retention	FALSE	canonical	0	0	junction_2	102.867681999742	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGCCGGGTTTTGGGACT	-33682262	True	NA	-10	True	AATAAA	-15	NA	33686429	33675683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_33677331_33677425_33677541_33678200_33678354_33679754_33679975_33680325_33680417_33686003
transcript_12754.nnic	chr1	-	1173	6	NNC	ENSG00000116874.12	novel	2787	6	NA	NA	-31	606	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	35.1761282690406	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGAAGGCATAGCTGTCT	NA	False	NA	-28	True	AATAAA	-1	NA	119140685	119032690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_119033360_119034094_119034214_119042263_119042350_119045581_119045663_119076520_119076608_119140554
transcript_127547.known	chr20	-	5690	4	FSM	ENSG00000101417.12	ENST00000409299.8	5690	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	5.71547606649408	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATGTGTATATATTTT	-33719589	True	NA	NA	False	AATAAA	-17	NA	33720310	33702757	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_33707970_33710554_33710754_33714673_33714737_33720094
transcript_127552.known	chr20	-	989	3	FSM	ENSG00000101417.12	ENST00000344022.7	989	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	11	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGTTCTAGATTCCCAC	-33719598	True	NA	NA	False	TTTAAA	-38	NA	33720319	33707268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_33707970_33714673_33714737_33720094
transcript_127554.known	chr20	+	3661	15	FSM	ENSG00000131061.14	ENST00000342427.6	3661	15	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_6	15.1832345778131	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGGTGGCCTGGGCCAAG	NA	False	NA	13	True	AATAAA	-19	NA	33731656	33792269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_33732053_33740901_33741013_33745102_33745300_33748922_33749073_33753171_33753424_33757147_33757323_33758715_33758807_33761861_33762056_33766850_33767042_33770083_33770293_33781290_33781388_33783731_33783865_33788862_33788975_33789517_33789589_33790987
transcript_127555.known	chr20	+	3343	15	FSM	ENSG00000131061.14	ENST00000375200.6	3343	15	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_6	15.7895922838367	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGGTGGCCTGGGCCAAG	33731034	True	NA	13	True	AATAAA	-19	NA	33731995	33792269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_33732053_33740901_33741013_33745102_33745300_33748922_33749073_33753171_33753424_33757147_33757344_33758715_33758807_33761861_33762056_33766850_33767042_33770083_33770293_33781290_33781388_33783731_33783865_33788862_33788975_33789517_33789589_33790987
transcript_127558.known	chr20	+	1602	5	FSM	ENSG00000101421.4	ENST00000217402.3	1602	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.82915619758885	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTGTTGTGTTTAATC	33799464	True	NA	28	True	ATTAAA	-21	NA	33811347	33854366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_33811659_33848466_33848645_33850951_33851067_33852076_33852204_33853495
transcript_127559.nic	chr20	+	818	4	ISM	ENSG00000101421.4	ENST00000217402.3	1602	5	-87	2163	-87	-2163	5prime_fragment	FALSE	canonical	0	0	junction_3	0.816496580927726	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGCTTCTAGAGTCAT	33811224	True	NA	12	True	NA	NA	NA	33811260	33852203	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_33811659_33848466_33848645_33850951_33851067_33852076
transcript_12756.known	chr1	-	621	5	FSM	ENSG00000116874.12	ENST00000495746.5	621	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	36.3627556711534	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACTGGCCACCGTCCGA	-119139491	True	NA	NA	False	NA	NA	NA	119140654	119033296	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_119033360_119034094_119034214_119045581_119045663_119076349_119076608_119140554
transcript_127574.known	chr20	+	6213	10	FSM	ENSG00000125970.12	ENST00000246194.8	6213	10	0	0	0	0	multi-exon	FALSE	canonical	3	1228	junction_5	132.681834234391	1635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGAGTGATTTGTTGT	33989813	True	NA	14	True	AATAAA	-21	NA	33993910	34084884	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_33994132_34031521_34031605_34072065_34072331_34073562_34073636_34073818_34073867_34075873_34076041_34076701_34076816_34077027_34077246_34078504_34078554_34079909
transcript_127591.known	chr20	+	6430	9	FSM	ENSG00000125970.12	ENST00000375114.7	6430	9	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_4	426.874030013539	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGAGTGATTTGTTGT	33993582	False	NA	14	True	AATAAA	-21	NA	33993645	34084884	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_33994132_34031521_34031605_34072065_34072331_34073562_34073636_34075873_34076041_34076701_34076816_34077027_34077246_34078504_34078554_34079909
transcript_12760.known	chr1	+	745	4	FSM	ENSG00000231365.7	ENST00000425884.6	1227	4	0	482	0	-482	multi-exon	FALSE	canonical	1	2	junction_3	4.64279609239471	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTTTTTTTTTAATAC	119139872	True	NA	NA	False	NA	NA	NA	119140395	119150934	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_119140794_119146952_119147070_119150564_119150653_119150792
transcript_127600.nnic	chr20	+	1786	9	NIC	ENSG00000125970.12	novel	6213	10	NA	NA	-14	2581	combination_of_known_splicesites	FALSE	canonical	3	220	junction_1	424.741962107584	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTCTGAGATGGGATGG	33993568	False	NA	26	True	AATAAA	-16	NA	33993631	34080261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_33994132_34072065_34072331_34073562_34073636_34073818_34073867_34075873_34076041_34076701_34076816_34077027_34077246_34078504_34078554_34079909
transcript_127621.known	chr20	-	2485	2	FSM	ENSG00000285230.3	ENST00000668968.2	2537	2	52	0	-1	0	multi-exon	FALSE	canonical	3	12	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACACACCCACCTTTGGGG	-33992591	True	NA	NA	False	GATAAA	-9	NA	33993135	33990496	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_33992906_33993059
transcript_127622.known	chr20	-	2556	9	FSM	ENSG00000125977.7	ENST00000374980.3	2556	9	0	0	0	0	multi-exon	FALSE	canonical	3	3667	junction_8	376.82636502108	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACGCTCCATTGCTTTTG	-34093087	True	NA	-14	True	AATAAA	-26	NA	34112243	34088308	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_34089906_34090516_34090603_34093674_34093732_34096656_34096806_34097415_34097517_34098497_34098634_34103461_34103566_34105367_34105546_34112095
transcript_127629.nic	chr20	-	571	4	ISM	ENSG00000125977.7	ENST00000374980.3	2556	9	-55	10239	-55	-10239	5prime_fragment	FALSE	canonical	3	3667	junction_3	398.51808825531	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAATGTTAAGTTCCCAG	NA	False	NA	NA	False	AATAAA	-12	NA	34112298	34098547	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_34098634_34103461_34103566_34105367_34105546_34112095
transcript_127630.nic	chr20	-	448	3	ISM	ENSG00000125977.7	ENST00000374980.3	2556	9	-55	15190	-55	-15190	5prime_fragment	FALSE	canonical	3	3667	junction_2	55	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATTTGATATTGATGAAG	NA	False	NA	NA	False	AAAAAG	-18	NA	34112298	34103498	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_34103566_34105367_34105546_34112095
transcript_127632.nic	chr20	-	238	2	ISM	ENSG00000125977.7	ENST00000374980.3	2556	9	-55	17202	-55	-17202	5prime_fragment	FALSE	canonical	3	3667	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAGAAGCCTTTTA	NA	False	NA	NA	False	AAGAAA	-3	NA	34112298	34105510	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_34105546_34112095
transcript_127640.nnic	chr20	-	1833	11	NNC	ENSG00000101444.13	novel	2150	10	NA	NA	-57	0	at_least_one_novel_splicesite	FALSE	canonical	3	257	junction_1	443.589855609887	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTGAGCCTTTATTTT	NA	False	NA	-20	True	AATAAA	-18	NA	34303414	34280267	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_34280651_34281026_34281166_34285439_34285635_34290331_34290450_34290550_34290639_34290730_34290939_34291418_34291532_34292357_34292508_34294080_34294157_34295394_34295586_34303242
transcript_12765.nnic	chr1	-	5147	3	NNC	ENSG00000143067.5	novel	5579	3	NA	NA	0	-52	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	6.5	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTACCATGTCATTCTT	-119645804	True	NA	-14	True	ATTAAA	-11	NA	119648266	119619428	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_119624117_119625874_119626138_119648070
transcript_127650.known	chr20	-	2150	10	FSM	ENSG00000101444.13	ENST00000217426.7	2150	10	0	0	0	0	multi-exon	FALSE	canonical	3	1449	junction_6	129.394697164609	2977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTGAGCCTTTATTTT	-34257887	True	NA	-20	True	AATAAA	-18	NA	34303355	34280267	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_34281166_34285439_34285635_34290331_34290450_34290550_34290639_34290730_34290939_34291418_34291532_34292357_34292508_34294080_34294157_34295394_34295586_34303242
transcript_127656.known	chr20	-	2211	9	FSM	ENSG00000101444.13	ENST00000480653.5	2211	9	0	0	0	0	multi-exon	FALSE	canonical	3	1449	junction_5	135.252945901374	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATTTTGAGCCTTTATT	-34257849	True	NA	-22	True	AATAAA	-16	NA	34303317	34280269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_34281166_34285439_34285635_34290331_34290639_34290730_34290939_34291418_34291532_34292357_34292508_34294080_34294157_34295394_34295586_34303242
transcript_127663.known	chr20	+	6743	25	FSM	ENSG00000078747.16	ENST00000374864.10	6743	25	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_4	5.98478974846513	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTTTTAAATCTATAAAT	34358752	True	NA	NA	False	NA	NA	NA	34363272	34511773	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_34363350_34369393_34369471_34393790_34393882_34408650_34408793_34412514_34412640_34413741_34413880_34424479_34424526_34438473_34438632_34440154_34440345_34442207_34442304_34445286_34445462_34449410_34449481_34457389_34457475_34462092_34462222_34470047_34470121_34471443_34471516_34477771_34477861_34479629_34479790_34480598_34480733_34481065_34481207_34489265_34489387_34489821_34489927_34492500_34492598_34504330_34504404_34507694
transcript_127671.known	chr20	+	205	2	FSM	ENSG00000078747.16	ENST00000479215.1	205	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGAGAGAGCAGTGTTG	34358774	True	NA	NA	False	NA	NA	NA	34363294	34369543	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_34363350_34369393
transcript_127672.known	chr20	+	1053	5	FSM	ENSG00000125971.17	ENST00000480759.1	1053	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	325.703373485753	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTCTGTTGTGTCTTTAA	34505615	True	NA	38	True	ACTAAA	-18	NA	34516413	34540958	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_34516462_34526267_34526344_34529851_34530235_34534627_34534796_34540580
transcript_127675.known	chr20	+	662	4	FSM	ENSG00000125971.17	ENST00000357156.7	662	4	0	0	0	0	multi-exon	FALSE	canonical	3	519	junction_1	97.6740611535234	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTCTGTTGTGTCTTTAA	34505623	True	NA	38	True	ACTAAA	-18	NA	34516421	34540958	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_34516462_34526267_34526344_34534627_34534796_34540580
transcript_127677.known	chr20	+	1464	3	FSM	ENSG00000125971.17	ENST00000300469.13	1464	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	259.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTTTTATCACTTGAA	34505645	True	NA	NA	False	ATTAAA	-20	NA	34516443	34531221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_34516462_34526267_34526344_34529851
transcript_127678.nnic	chr20	+	615	5	NNC	ENSG00000101460.13	novel	698	5	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	34.4047598451145	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCCTCCAGCCGCTTG	34557628	True	NA	15	True	AATAAA	-22	NA	34558691	34560345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_34558909_34559207_34559264_34559346_34559454_34559735_34559797_34560171
transcript_127679.known	chr20	+	964	4	FSM	ENSG00000101460.13	ENST00000360668.8	964	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	6.64997911442	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCCTCCAGCCGCTTG	34557654	True	NA	15	True	AATAAA	-22	NA	34558717	34560345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_34558909_34559207_34559264_34559346_34559454_34559735
transcript_127681.known	chr20	+	698	5	FSM	ENSG00000101460.13	ENST00000397709.1	698	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	33.1247641501038	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCCTCCAGCCGCTTG	34557654	True	NA	15	True	AATAAA	-22	NA	34558717	34560345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_34558909_34559207_34559264_34559346_34559454_34559735_34559906_34560171
transcript_127683.known	chr20	-	1639	12	FSM	ENSG00000101464.11	ENST00000217446.8	1639	12	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_5	8.09448337801893	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGAGACCACATCTGCAT	-34674806	True	NA	-12	True	AATAAA	-22	NA	34677092	34560541	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_34560980_34575103_34575247_34581547_34581673_34585436_34585581_34588452_34588608_34616041_34616140_34634614_34634716_34637875_34637986_34644163_34644227_34645274_34645335_34657179_34657245_34676955
transcript_127686.known	chr20	-	1248	11	FSM	ENSG00000101464.11	ENST00000374820.6	1248	11	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_9	56.8665982805372	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCTGGCACAGGGCTG	-34674799	True	NA	NA	False	NA	NA	NA	34677085	34560865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_34560980_34575103_34575247_34581547_34581673_34585436_34585581_34588452_34588608_34616041_34616140_34634614_34634716_34637875_34637986_34644163_34644227_34657179_34657245_34676955
transcript_12769.known	chr1	+	1180	5	FSM	ENSG00000092621.13	ENST00000641573.1	1180	5	0	0	0	0	multi-exon	FALSE	canonical	3	2221	junction_3	84.8071341338687	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCCGGGCGTGGTGGCGG	119675520	True	NA	NA	False	ACTAAA	-17	NA	119711934	119727684	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119726850_119726906_119727003
transcript_127693.known	chr20	-	4082	14	FSM	ENSG00000198646.14	ENST00000612493.4	4082	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	9.86716508149945	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGGGTGATCAGCTCT	-34825032	True	NA	-1	True	AATAAA	-42	NA	34825630	34714774	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_34715366_34727258_34727408_34732558_34732596_34736689_34736759_34746806_34746929_34749402_34750520_34754721_34754869_34757219_34758105_34758804_34758934_34768463_34768587_34776292_34776449_34782120_34782405_34792449_34792564_34825471
transcript_12770.known	chr1	+	1780	11	FSM	ENSG00000092621.13	ENST00000641074.1	1780	11	0	0	0	0	multi-exon	TRUE	canonical	1	5	junction_9	713.499376313673	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTCCTTCTGCACTTTTG	119675471	True	NA	21	True	AATAAA	-12	NA	119711885	119744212	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119726850_119726906_119727003_119727103_119734633_119734767_119735294_119735444_119737113_119737267_119740385_119740519_119742806_119743045_119743885
transcript_127700.nnic	chr20	+	2955	19	NNC	ENSG00000131069.20	novel	2885	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_14	28.8210742511041	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGGTGACTTGTTTTCT	34874820	True	NA	15	True	AATAAA	-15	NA	34876571	34927959	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_34876824_34882793_34882990_34913095_34913188_34913392_34913497_34913752_34913826_34914095_34914172_34914322_34914438_34919434_34919573_34920538_34920710_34921005_34921140_34921329_34921463_34921543_34921601_34921785_34921867_34921962_34921993_34923322_34923432_34925697_34925767_34926104_34926282_34926876_34926952_34927086
transcript_127705.known	chr20	+	2885	18	FSM	ENSG00000131069.20	ENST00000360596.7	2885	18	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	12.8975199461465	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGGTGACTTGTTTTCT	34874860	True	NA	15	True	AATAAA	-15	NA	34876611	34927959	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_34876824_34882793_34882990_34913095_34913188_34913392_34913497_34913752_34913826_34914095_34914172_34914322_34914438_34919434_34919573_34920538_34920710_34921005_34921140_34921329_34921463_34921543_34921601_34921785_34921867_34923322_34923432_34925697_34925767_34926104_34926282_34926876_34926952_34927086
transcript_12771.known	chr1	+	2794	11	FSM	ENSG00000092621.13	ENST00000642021.1	2794	11	0	0	0	0	multi-exon	FALSE	canonical	3	2221	junction_3	104.220727305081	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTACCCCCAACTCCTT	119675486	True	NA	10	True	AATAAA	-1	NA	119711900	119744201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119726850_119726906_119727003_119727103_119734633_119734767_119735294_119735444_119737113_119737267_119740385_119740519_119741766_119743045_119743885
transcript_12772.known	chr1	+	1866	12	FSM	ENSG00000092621.13	ENST00000641023.2	1866	12	0	0	0	0	multi-exon	FALSE	canonical	3	2221	junction_3	102.554480582778	2217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTCTGCACTTTTGTGT	119675519	True	NA	24	True	AATAAA	-15	NA	119711933	119744215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119726850_119726906_119727003_119727103_119734633_119734767_119735294_119735444_119737113_119737267_119740385_119740519_119741766_119741898_119742806_119743045_119743885
transcript_12773.known	chr1	+	1638	10	FSM	ENSG00000092621.13	ENST00000641115.1	1638	10	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_8	739.310188997525	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTCTGCACTTTTGTGT	119675483	True	NA	24	True	AATAAA	-15	NA	119711897	119744215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119726850_119726906_119727003_119727103_119734633_119734767_119735294_119735444_119737113_119737267_119742806_119743045_119743885
transcript_127739.known	chr20	-	2638	15	FSM	ENSG00000131067.17	ENST00000336431.10	2638	15	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	11.8599394292427	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGCTCTGGTTTAATTT	-34869280	True	NA	-6	True	ATTAAA	-18	NA	34872856	34844719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_34845492_34849960_34850061_34851230_34851369_34852154_34852273_34852388_34852539_34854530_34854620_34854795_34854924_34856805_34856894_34859442_34859640_34859968_34860043_34860253_34860322_34861444_34861563_34862813_34862966_34863312_34863549_34872646
transcript_127801.nic	chr20	-	2175	8	ISM	ENSG00000131067.17	ENST00000336431.10	2638	15	-4	11058	-4	-5751	5prime_fragment	FALSE	canonical	3	81	junction_3	12.589273049639	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAAGCGTAGCGTTGGAG	-34869284	True	NA	NA	False	AAGAAA	-4	NA	34872860	34855777	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_34856894_34859442_34859640_34859968_34860043_34860253_34860322_34861444_34861563_34862813_34862966_34863312_34863549_34872646
transcript_12781.known	chr1	-	6927	5	FSM	ENSG00000265808.4	ENST00000578049.4	6927	5	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_2	11.9687092035858	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCGGTCCCCTTCTGTT	-120171624	True	NA	NA	False	TATAAA	-40	NA	120176520	120150897	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_120157193_120160383_120160531_120163209_120163371_120168839_120168950_120176306
transcript_127814.known	chr20	+	1527	6	FSM	ENSG00000131069.20	ENST00000476922.5	1527	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	48.3470785053244	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGACTTGTTTTCTTAG	34874870	True	NA	18	True	AATAAA	-18	NA	34876621	34927962	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_34876824_34882793_34882990_34923322_34923432_34925697_34925767_34926876_34926952_34927086
transcript_127821.nic	chr20	-	1527	4	ISM	ENSG00000131067.17	ENST00000336431.10	2638	15	-4	15918	-4	2176	5prime_fragment	FALSE	canonical	3	105	junction_2	2.49443825784929	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGGGTTGGTGAAATCC	-34869284	True	NA	NA	False	NA	NA	NA	34872860	34860637	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_34861563_34862813_34862966_34863312_34863549_34872646
transcript_127822.known	chr20	-	615	4	FSM	ENSG00000131067.17	ENST00000427420.1	615	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	49.4974746830583	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGAGCAGTGGAGGTCG	-34869246	True	NA	NA	False	NA	NA	NA	34872822	34862813	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_34862966_34863312_34863549_34863679_34863731_34872646
transcript_127823.nic	chr20	-	1107	4	ISM	ENSG00000131067.17	ENST00000336431.10	2638	15	-1	16335	-1	1759	5prime_fragment	FALSE	canonical	3	105	junction_2	2.49443825784929	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGATATCGAATAACTTGG	-34869281	True	NA	NA	False	AGTAAA	-24	NA	34872857	34861054	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_34861563_34862813_34862966_34863312_34863549_34872646
transcript_12785.nnic	chr1	-	2775	5	NNC	ENSG00000265808.4	novel	2230	2	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	57.814358078249	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGTTGCAGTGCTGCTC	-120171634	True	NA	0	True	AATAAA	-20	NA	120176530	120157289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_120159423_120160383_120160531_120163209_120163371_120168839_120168950_120176306
transcript_127876.known	chr20	-	3138	19	FSM	ENSG00000100991.12	ENST00000451813.6	3138	19	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_11	135.80797309273	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTGGACCTGGCTTTT	-35076424	True	NA	-9	True	AATAAA	-44	NA	35092807	35002403	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35003284_35003409_35003617_35004457_35004571_35005694_35005804_35006434_35006576_35007549_35007641_35008663_35008748_35010186_35010289_35013007_35013067_35016007_35016140_35021189_35021333_35035122_35035309_35044504_35044713_35049865_35049995_35054975_35055032_35057513_35057572_35069295_35069413_35078045_35078175_35092613
transcript_127880.known	chr20	-	3162	19	FSM	ENSG00000100991.12	ENST00000252015.3	3162	19	0	0	0	0	multi-exon	FALSE	canonical	3	522	junction_11	103.962540737244	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTGGACCTGGCTTTT	-35076424	True	NA	-9	True	AATAAA	-44	NA	35092807	35002403	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35003284_35003409_35003617_35004457_35004571_35005694_35005804_35006434_35006576_35007549_35007641_35008663_35008748_35010186_35010289_35013007_35013067_35016007_35016140_35021189_35021357_35035122_35035309_35044504_35044713_35049865_35049995_35054975_35055032_35057513_35057572_35069295_35069413_35078045_35078175_35092613
transcript_12792.known	chr1	-	625	2	FSM	ENSG00000223804.5	ENST00000617318.4	625	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCAGGCGTGATGGTAT	-120341804	False	NA	NA	False	AATAAA	-31	NA	120341839	120267336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_120267839_120341716
transcript_127952.known	chr20	-	1437	13	FSM	ENSG00000100983.12	ENST00000643443.1	1437	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_11	67.5030863491935	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTATCCTCTGTATTTGT	-34950943	True	NA	NA	False	NA	NA	NA	34955755	34928805	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_34928952_34929400_34929591_34931335_34931418_34931938_34932134_34935575_34935643_34936762_34936841_34936942_34937024_34941712_34941830_34942487_34942628_34942930_34943007_34945952_34946052_34951723_34951861_34955726
transcript_127953.known	chr20	-	1909	13	FSM	ENSG00000100983.12	ENST00000651619.1	1909	13	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	29.1074398660472	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGATTCCTTACTTCGTG	-34950994	True	NA	-5	True	AATAAA	-19	NA	34955806	34928431	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_34928952_34929400_34929591_34931335_34931418_34931938_34932134_34935575_34935643_34936762_34936841_34936942_34937024_34941712_34941830_34942487_34942628_34942930_34943007_34945952_34946099_34951723_34951861_34955726
transcript_127956.known	chr20	-	2131	13	FSM	ENSG00000100983.12	ENST00000642498.1	2131	13	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	65.4647912154991	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTAATTCTGCCTTAAAT	-34950971	True	NA	-46	True	NA	NA	NA	34955783	34928472	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_34929238_34929400_34929591_34931335_34931418_34931938_34932134_34935575_34935643_34936762_34936841_34936942_34937024_34941712_34941830_34942487_34942628_34942930_34943007_34945952_34946099_34951723_34951861_34955726
transcript_127958.nic	chr20	-	2222	12	NIC	ENSG00000100983.12	novel	1909	13	NA	NA	-9	0	intron_retention	FALSE	canonical	3	156	junction_1	29.7804639496743	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGATTCCTTACTTCGT	NA	False	NA	-6	True	AATAAA	-18	NA	34955817	34928432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_34928952_34929400_34929591_34931335_34931418_34931938_34932134_34935575_34935643_34936762_34936841_34936942_34937024_34941712_34941830_34942487_34943007_34945952_34946099_34951723_34951861_34955726
transcript_127965.nic	chr20	-	2365	12	NIC	ENSG00000100983.12	novel	2131	13	NA	NA	-9	-3	intron_retention	FALSE	canonical	3	181	junction_11	21.7605298914577	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGATGATTCCTTACTT	NA	False	NA	-9	True	AATAAA	-15	NA	34955817	34928435	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_34929591_34931335_34931418_34931938_34932134_34935575_34935643_34936762_34936841_34936942_34937024_34941712_34941830_34942487_34942628_34942930_34943007_34945952_34946099_34951723_34951861_34955726
transcript_12797.nnic	chr1	-	2776	8	NNC	ENSG00000275131.3	novel	6897	42	NA	NA	-10561	-15653	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	23.2115382989599	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGCGCCAGCTTCGTCT	-120558811	True	NA	NA	False	AAGAAA	-3	NA	120558918	120544039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_120544085_120544266_120544381_120545280_120545440_120548288_120548502_120548640_120548734_120548972_120549093_120550144_120550277_120557018
transcript_127973.known	chr20	-	1554	10	FSM	ENSG00000100983.12	ENST00000646735.1	1554	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	77.7604742656878	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGATTCCTTACTTCGT	-34950973	True	NA	-6	True	AATAAA	-18	NA	34955785	34928432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_34928952_34929400_34929591_34931335_34931418_34931938_34932134_34935575_34935643_34936762_34936841_34936942_34937024_34945952_34946099_34951723_34951861_34955726
transcript_12798.known	chr1	+	1111	5	FSM	ENSG00000286106.2	ENST00000624419.2	1111	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	7.56637297521078	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGACATTAACAGTAGGTGA	120723817	True	NA	NA	False	AATAAA	-16	NA	120723945	120793874	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_120724251_120763627_120763710_120784973_120785234_120793160_120793497_120793746
transcript_127986.nnic	chr20	-	1957	12	NNC	ENSG00000088298.13	novel	1884	11	NA	NA	-22	0	at_least_one_novel_splicesite	TRUE	canonical	3	13	junction_6	62.8545480842559	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTTATCATGTTTTAC	NA	False	NA	0	True	AATAAA	-19	NA	35147358	35115363	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_35115934_35118597_35118720_35123889_35124035_35126250_35126376_35131641_35131784_35134104_35134156_35134737_35134950_35137879_35138006_35142372_35142479_35144978_35145019_35146824_35146936_35147151
transcript_127991.known	chr20	-	1884	11	FSM	ENSG00000088298.13	ENST00000374492.8	1884	11	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_5	20.5817880661521	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTTATCATGTTTTAC	-35145644	True	NA	0	True	AATAAA	-19	NA	35147336	35115363	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35115934_35118597_35118720_35123889_35124035_35126250_35126376_35131641_35131784_35134737_35134950_35137879_35138006_35142372_35142479_35144978_35145019_35146824_35146936_35147151
transcript_127993.nnic	chr20	-	1929	11	NNC	ENSG00000088298.13	novel	1884	11	NA	NA	-22	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	54.0319350014415	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGGTTATCATGTTTT	NA	False	NA	-2	True	AATAAA	-17	NA	35147358	35115365	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_35115959_35118597_35118720_35123889_35124035_35126250_35126376_35131641_35131784_35134737_35134950_35137879_35138006_35142372_35142479_35144978_35145019_35146824_35146936_35147151
transcript_127995.known	chr20	-	1756	10	FSM	ENSG00000088298.13	ENST00000374491.3	1756	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	55.8848021479106	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTTATCATGTTTTAC	-35145627	True	NA	0	True	AATAAA	-19	NA	35147319	35115363	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35115934_35118597_35118720_35123889_35124035_35126250_35126376_35131641_35131784_35134737_35134950_35137879_35138006_35142372_35142479_35144978_35145019_35147151
transcript_128.known	SIRV4	-	592	4	FSM	SIRV4A	SIRV404	592	4	0	0	0	0	multi-exon	FALSE	canonical	3	810	junction_3	3229.99755761862	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGATATTTAGAGCGTA	NA	False	NA	NA	False	NA	NA	NA	14623	8322	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV4_-_8373_8629_8991_13672_13823_14592
transcript_128003.nnic	chr20	-	1552	9	NIC	ENSG00000088298.13	novel	1884	11	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_4	52.0384473250308	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTTATCATGTTTTAC	NA	False	NA	0	True	AATAAA	-19	NA	35147358	35115363	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_35115934_35118597_35118720_35123889_35124035_35126250_35126376_35137879_35138006_35142372_35142479_35144978_35145019_35146824_35146936_35147151
transcript_128010.nnic	chr20	-	1426	8	NIC	ENSG00000088298.13	novel	1884	11	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	1	9	junction_4	60.8685435330659	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTTATCATGTTTTAC	NA	False	NA	0	True	AATAAA	-19	NA	35147358	35115363	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_35115934_35118597_35118720_35123889_35124035_35126250_35126376_35142372_35142479_35144978_35145019_35146824_35146936_35147151
transcript_128018.known	chr20	-	1054	7	FSM	ENSG00000242372.9	ENST00000675032.1	1054	7	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_6	482.303068619722	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTGGGGCCCTCAGCCT	-35275599	False	NA	-6	True	ATTAAA	-32	NA	35284717	35278906	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35280653_35280830_35284175_35284262_35284380_35284493_35284696
transcript_128019.known	chr20	-	1069	7	FSM	ENSG00000242372.9	ENST00000374450.8	1069	7	0	0	0	0	multi-exon	FALSE	canonical	3	971	junction_6	161.195533436879	1383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAATGTGATGTTTGGG	-35275654	True	NA	-17	True	ATTAAA	-21	NA	35284772	35278917	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35280653_35280830_35284175_35284262_35284380_35284493_35284725
transcript_128026.known	chr20	-	932	6	FSM	ENSG00000242372.9	ENST00000447927.6	932	6	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_3	442.209633544996	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTTTGGGGCCCTCA	NA	False	NA	-10	True	ATTAAA	-28	NA	35284804	35278910	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35284175_35284262_35284380_35284493_35284725
transcript_12803.known	chr1	+	692	3	FSM	ENSG00000226067.7	ENST00000613486.2	692	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	32.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATTGGTTCTATTATTT	120913168	False	NA	NA	False	AATAAA	-28	NA	120913183	120953460	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_120913451_120952438_120952626_120953222
transcript_128031.known	chr20	-	1017	5	FSM	ENSG00000242372.9	ENST00000374443.7	1017	5	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_3	488.68055772662	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTTTGGGGCCCTCA	-35275652	True	NA	-10	True	ATTAAA	-28	NA	35284770	35278910	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35284175_35284493_35284725
transcript_128034.known	chr20	+	1349	4	FSM	ENSG00000101000.6	ENST00000216968.5	1349	4	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	7.76029781788188	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTATCTCCTCCACTTTG	35169117	True	NA	28	True	AATAAA	-19	NA	35172071	35177362	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_35172225_35174701_35174954_35176167_35176447_35176697
transcript_128036.known	chr20	-	798	4	FSM	ENSG00000242372.9	ENST00000440766.5	798	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	653.467843296227	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTTTGGGGCCCTCA	-35275405	False	539	-10	True	ATTAAA	-28	NA	35284523	35278910	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35284380
transcript_128039.known	chr20	-	867	2	FSM	ENSG00000126005.17	ENST00000424358.1	867	2	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGAGGGAGGCTATCTGA	-35269011	False	9118	NA	False	NA	NA	NA	35278129	35277149	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35277933_35278045
transcript_12804.known	chr1	+	821	3	FSM	ENSG00000226067.7	ENST00000621058.5	821	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	16	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTTCTATTATTTTAT	120913205	False	NA	NA	False	AATAAA	-31	NA	120913220	120953463	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_120913451_120952438_120952786_120953219
transcript_128042.known	chr20	-	1499	3	FSM	ENSG00000126005.17	ENST00000435366.2	1499	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	4.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTATAAAACACTGTACAAA	-35268909	False	9118	-23	True	AATAAA	-12	NA	35278027	35276360	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35277298_35277389_35277933_35278008
transcript_128043.known	chr20	-	1695	2	FSM	ENSG00000126005.17	ENST00000456790.2	1695	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGTACAAACCTATGAAT	-35269004	False	9118	-14	True	AATAAA	-21	NA	35278122	35276351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35277933_35278008
transcript_128044.known	chr20	-	1252	6	FSM	ENSG00000242372.9	ENST00000374436.7	1252	6	0	0	0	0	multi-exon	FALSE	canonical	3	1123	junction_3	127.673646458461	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTTTGGGGCCCTCA	-35275597	False	NA	-10	True	ATTAAA	-28	NA	35284715	35278910	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35280653_35280830_35284175_35284262_35284380
transcript_128050.known	chr20	-	2267	10	FSM	ENSG00000101019.22	ENST00000374385.10	2267	10	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_9	23.4662878757307	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTCCTGGAATGGATGGA	-35410678	True	NA	-10	True	AATAAA	-20	NA	35411973	35302577	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35304070_35306665_35306780_35314687_35314766_35347163_35347273_35366556_35366615_35374183_35374257_35381917_35382026_35384037_35384134_35394091_35394197_35411939
transcript_128055.known	chr20	-	758	9	FSM	ENSG00000101019.22	ENST00000424405.5	758	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_7	98.0254271860113	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTCAGAGCATCCTGAAG	-35410678	True	NA	NA	False	NA	NA	NA	35411973	35303990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35304070_35306665_35306780_35314687_35314766_35347163_35347273_35366556_35366615_35374183_35374257_35381917_35382026_35394091_35394197_35411939
transcript_128058.nic	chr20	-	4878	9	NIC	ENSG00000101019.22	novel	2267	10	NA	NA	-15	-3	intron_retention	FALSE	canonical	3	261	junction_8	23.4384166487414	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGCTCCTGGAATGGAT	-35410696	True	NA	-13	True	AATAAA	-17	NA	35411991	35302580	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_35306780_35314687_35314766_35347163_35347273_35366556_35366615_35374183_35374257_35381917_35382026_35384037_35384134_35394091_35394197_35411939
transcript_12806.known	chr1	+	1261	2	FSM	ENSG00000226067.7	ENST00000659101.1	1261	2	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATTGGTTCTATTATTT	120913196	False	NA	NA	False	AATAAA	-28	NA	120913211	120953460	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_120913451_120952438
transcript_128061.known	chr20	-	2133	8	FSM	ENSG00000101019.22	ENST00000374380.6	2133	8	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_6	108.228405490897	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGATGGAAAAATTAATGGA	-35410736	True	NA	2	True	AATAAA	-32	NA	35412031	35302565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35304070_35306665_35306780_35314687_35314766_35347163_35347273_35366556_35366615_35374183_35374257_35394091_35394197_35411939
transcript_128063.known	chr20	-	692	8	FSM	ENSG00000101019.22	ENST00000443429.5	692	8	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	110.089573919215	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACAGGTGAGTGACCCTT	-35410675	True	NA	NA	False	NA	NA	NA	35411970	35306672	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35306780_35314687_35314766_35347163_35347273_35366556_35366615_35381917_35382026_35384037_35384134_35394091_35394197_35411939
transcript_128067.known	chr20	-	1035	7	FSM	ENSG00000101019.22	ENST00000453855.5	1035	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	113.694644650582	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGACTTAGAAACTTGCCTG	-35410665	True	NA	19	True	ATTAAA	-43	NA	35411960	35303432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35304070_35306665_35306780_35314687_35314708_35381983_35382026_35384037_35384134_35394091_35394197_35411939
transcript_128068.known	chr20	-	1987	7	FSM	ENSG00000101019.22	ENST00000457259.5	1987	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	115.969344608344	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGATGGAAAAATTAATGGA	-35410663	True	NA	2	True	AATAAA	-32	NA	35411958	35302565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35304070_35306665_35306780_35314687_35314766_35347163_35347273_35366556_35366615_35394091_35394197_35411939
transcript_128069.known	chr20	-	2036	7	FSM	ENSG00000101019.22	ENST00000359226.6	2036	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	115.884161510057	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGATGGAAAAATTAATGGA	-35410675	True	NA	2	True	AATAAA	-32	NA	35411970	35302565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35304070_35306665_35306780_35314687_35314766_35381917_35382026_35384037_35384134_35394091_35394197_35411939
transcript_128072.known	chr20	-	3638	7	FSM	ENSG00000101019.22	ENST00000397554.5	3638	7	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_6	26.6207938774685	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGGAATTCTTTTTTA	-35410679	True	NA	1	True	AATAAA	-34	NA	35411974	35344109	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35347273_35366556_35366615_35374183_35374257_35381917_35382026_35384037_35384134_35394091_35394197_35411939
transcript_128080.known	chr20	-	2188	9	FSM	ENSG00000101019.22	ENST00000349714.9	2188	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	104.828431257937	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGATGGAAAAATTAATGGA	-35410668	True	NA	2	True	AATAAA	-32	NA	35411963	35302565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35304070_35306665_35306780_35314687_35314766_35347163_35347273_35366556_35366615_35381925_35382026_35384037_35384134_35394091_35394197_35411939
transcript_128081.known	chr20	-	2572	4	FSM	ENSG00000125965.9	ENST00000374372.1	2572	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGCAAATTTCTTGTTT	-35454601	True	NA	NA	False	GATAAA	-21	NA	35454746	35433346	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35434784_35437297_35438170_35441231_35441388_35454639
transcript_12809.known	chr1	+	7091	10	FSM	ENSG00000171943.12	ENST00000367123.8	7091	10	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_6	64.9888879390589	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAGAACAGAAATTGTATA	121181374	True	NA	NA	False	AATAAA	-21	NA	121184974	121392874	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_121185125_121186904_121187514_121284802_121284996_121324477_121324641_121365292_121365356_121373970_121374187_121374825_121374955_121382700_121382926_121386505_121386608_121387633
transcript_128090.nic	chr20	+	2495	17	NIC	ENSG00000126001.16	novel	2156	14	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	13.322326185768	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAGAAGGAAGAAATTCAA	NA	False	NA	NA	False	GGGGCT	-32	NA	35455103	35478066	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_35455243_35458303_35458375_35459982_35460106_35462264_35462554_35463574_35463632_35465742_35465826_35466038_35466205_35466965_35467073_35467303_35467556_35469889_35469987_35472049_35472152_35472672_35472832_35473373_35473553_35473869_35474053_35475501_35475647_35476448_35476596_35477870
transcript_128093.nic	chr20	+	2956	17	ISM	ENSG00000126001.16	ENST00000397527.6	15434	35	-446	41214	-12	0	5prime_fragment	FALSE	canonical	2	14	junction_1	12.1692170557518	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAGAAGGAAGAAATTCAA	NA	False	NA	NA	False	GGGGCT	-32	NA	35455151	35478066	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_35455752_35458303_35458375_35459982_35460106_35462264_35462554_35463574_35463632_35465742_35465826_35466038_35466205_35466965_35467073_35467303_35467556_35469889_35469987_35472049_35472152_35472672_35472832_35473373_35473553_35473869_35474053_35475501_35475647_35476448_35476596_35477870
transcript_128102.nnic	chr20	+	2407	16	NIC	ENSG00000126001.16	novel	2156	14	NA	NA	-43	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	13.679506163926	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAGAAGGAAGAAATTCAA	NA	False	NA	NA	False	GGGGCT	-32	NA	35455120	35478066	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_35455243_35459982_35460106_35462264_35462554_35463574_35463632_35465742_35465826_35466038_35466205_35466965_35467073_35467303_35467556_35469889_35469987_35472049_35472152_35472672_35472832_35473373_35473553_35473869_35474053_35475501_35475647_35476448_35476596_35477870
transcript_128105.nnic	chr20	+	2641	16	NIC	ENSG00000126001.16	novel	2156	14	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	13.679506163926	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAGAAGGAAGAAATTCAA	35452918	True	NA	NA	False	GGGGCT	-32	NA	35455160	35478066	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_35455517_35459982_35460106_35462264_35462554_35463574_35463632_35465742_35465826_35466038_35466205_35466965_35467073_35467303_35467556_35469889_35469987_35472049_35472152_35472672_35472832_35473373_35473553_35473869_35474053_35475501_35475647_35476448_35476596_35477870
transcript_128111.known	chr20	+	1419	10	FSM	ENSG00000126001.16	ENST00000397524.5	1419	10	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	14.1325296766619	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTAACTCATTCATTTA	35455613	False	NA	7	True	AATAAA	-20	NA	35455723	35470132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_35455752_35458303_35458375_35459982_35460106_35462264_35462554_35463574_35463632_35465742_35465826_35466038_35466205_35466965_35467073_35467303_35467556_35469889
transcript_128118.known	chr20	+	2156	14	FSM	ENSG00000126001.16	ENST00000425934.5	2156	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	15.2070522413064	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAGAGAAGGAAGAAATT	35462154	False	NA	NA	False	GGGGCT	-29	NA	35462264	35478063	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_35462554_35463574_35463632_35465742_35465826_35466038_35466205_35466965_35467073_35467303_35467556_35469889_35469987_35472052_35472152_35472672_35472832_35473373_35473553_35473869_35474053_35475501_35475647_35476448_35476596_35477870
transcript_128122.known	chr20	+	1302	13	FSM	ENSG00000125991.21	ENST00000348547.7	1302	13	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_1	84.1263517309265	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTGGTCTCCGTGTGAT	35532213	True	NA	29	True	GATAAA	-24	NA	35542077	35557634	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_35542186_35542322_35542394_35542512_35542601_35542821_35542942_35547411_35547506_35548508_35548675_35548807_35548866_35555043_35555076_35556032_35556130_35556206_35556272_35556972_35557110_35557193_35557250_35557424
transcript_128138.known	chr20	+	601	5	FSM	ENSG00000125991.21	ENST00000411577.5	601	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	345.46128581941	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTGGGTCAGGAATTTAG	35532251	True	NA	NA	False	AATAAA	-18	NA	35542115	35543909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_35542186_35542322_35542394_35542512_35542601_35542821_35542942_35543657
transcript_128139.nic	chr20	+	1504	11	ISM	ENSG00000061656.11	ENST00000679710.1	1542	12	840	45	-211	0	3prime_fragment	FALSE	canonical	2	8	junction_2	15.8521291945278	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGCTGAAGGATACTGG	35616649	True	NA	14	True	ATTAAA	-27	NA	35616668	35621049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_35617241_35617519_35617587_35617778_35617841_35618086_35618131_35618449_35618476_35618611_35618721_35618922_35618999_35619194_35619311_35619578_35619747_35620683_35620774_35620875
transcript_128156.known	chr20	-	1952	16	FSM	ENSG00000214078.13	ENST00000397443.7	1952	16	0	0	0	0	multi-exon	TRUE	canonical	3	338	junction_15	126.405625753849	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGCCACCACTCTCTT	-35641316	True	NA	-15	True	AATAAA	-17	NA	35664900	35626043	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35626382_35626566_35626804_35627279_35627414_35630438_35630491_35630740_35630796_35630900_35631035_35631113_35631174_35631267_35631355_35631491_35631579_35631687_35631778_35631944_35632026_35632162_35632235_35632310_35632386_35632516_35632697_35632794_35632924_35664759
transcript_128157.nic	chr20	-	1951	16	NIC	ENSG00000214078.13	novel	1952	16	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	331	junction_15	127.971594070281	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGCCACCACTCTCTT	-35641357	True	NA	-15	True	AATAAA	-17	NA	35664941	35626043	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_35626382_35626566_35626804_35627279_35627414_35630438_35630491_35630740_35630796_35630900_35631035_35631113_35631174_35631267_35631355_35631491_35631579_35631687_35631778_35631944_35632026_35632162_35632235_35632310_35632386_35632516_35632697_35632794_35632924_35664801
transcript_128185.known	chr20	-	2645	13	FSM	ENSG00000244005.13	ENST00000374085.5	2645	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	43.7209427315255	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGATTGTGATAAGTGCTA	-35699176	False	NA	-12	True	AATAAA	-8	NA	35699189	35668698	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35669686_35672754_35672845_35673600_35673685_35674349_35674432_35674511_35674618_35675044_35675203_35680736_35680872_35681887_35681982_35690412_35690566_35696376_35696461_35697683_35697801_35698480_35698591_35698744
transcript_128186.known	chr20	-	3008	13	FSM	ENSG00000244005.13	ENST00000374092.9	3008	13	0	0	0	0	multi-exon	TRUE	canonical	3	109	junction_9	21.0480600847996	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAATTTGGCTGGGTGTG	-35697752	True	NA	NA	False	ATTAAA	-19	NA	35699352	35668051	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35669686_35672754_35672845_35673600_35673685_35674349_35674432_35674511_35674618_35675044_35675203_35680736_35680872_35681887_35681982_35690412_35690566_35696376_35696461_35697683_35697801_35698480_35698591_35699191
transcript_128187.known	chr20	-	1956	13	FSM	ENSG00000244005.13	ENST00000397425.5	1956	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_12	42.0333862013942	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCACCTTCTATTTACT	-35697749	True	NA	-25	True	NA	NA	NA	35699349	35668982	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35669686_35672754_35672845_35673600_35673685_35674349_35674432_35674511_35674618_35675044_35675203_35680736_35680872_35681887_35681982_35690412_35690566_35696376_35696461_35697683_35697801_35698480_35698591_35699309
transcript_12819.nic	chr1	+	3222	10	NIC	ENSG00000171943.12	novel	7091	10	NA	NA	-17	1025	combination_of_known_junctions	FALSE	canonical	3	74	junction_7	72.6133001455291	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATAATGGTGTTAGAATA	121181357	True	NA	NA	False	AATAAA	-25	NA	121184957	121388991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_121185125_121186904_121187514_121284802_121284996_121324477_121324641_121365292_121365356_121373970_121374187_121374825_121374955_121382703_121382926_121386505_121386608_121387633
transcript_128195.known	chr20	-	1436	12	FSM	ENSG00000244005.13	ENST00000541387.5	1436	12	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_8	43.4680465903423	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGTCTTTCCCTAGCT	-35697752	True	NA	NA	False	NA	NA	NA	35699352	35669470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35669686_35672754_35672845_35673600_35673685_35674349_35674432_35674511_35674618_35675044_35675203_35680736_35680872_35681887_35681982_35696376_35696461_35697683_35697801_35698480_35698591_35699191
transcript_128198.known	chr20	-	1794	12	FSM	ENSG00000244005.13	ENST00000440385.5	1794	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_11	54.3504088498767	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGAGAAATAAACTCACCT	-35697755	True	NA	-35	True	NA	NA	NA	35699355	35668992	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35669686_35672754_35672845_35673600_35673685_35674349_35674432_35674511_35674618_35680736_35680872_35681887_35681982_35690412_35690566_35696376_35696461_35697683_35697801_35698480_35698591_35699309
transcript_1282.known	chr1	-	3235	12	FSM	ENSG00000008130.15	ENST00000341426.9	3235	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	147.548675257516	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGGTTAATAACAGCTTT	-1774614	True	NA	NA	False	AATAAA	-20	NA	1778470	1751231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1753061_1753566_1753650_1754050_1754209_1754283_1754384_1754543_1754699_1755373_1755477_1756257_1756344_1756502_1756609_1757180_1757311_1761951_1762036_1765227_1765447_1778288
transcript_12820.nic	chr1	+	3418	10	NIC	ENSG00000171943.12	novel	7091	10	NA	NA	-17	1221	combination_of_known_junctions	FALSE	canonical	3	74	junction_7	72.6133001455291	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAGAATGGCATTTTAGC	121181357	True	NA	NA	False	ATTAAA	-16	NA	121184957	121389187	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_121185125_121186904_121187514_121284802_121284996_121324477_121324641_121365292_121365356_121373970_121374187_121374825_121374955_121382703_121382926_121386505_121386608_121387633
transcript_128206.known	chr20	-	1755	16	FSM	ENSG00000214078.13	ENST00000437340.5	1755	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	226.998619672749	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCCTAGGTTCCCTTG	-35641372	True	NA	NA	False	NA	NA	NA	35664956	35626251	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35626382_35626566_35626801_35627279_35627414_35630438_35630491_35630740_35630796_35630900_35631035_35631113_35631174_35631267_35631355_35631491_35631579_35631687_35631778_35631944_35632026_35632162_35632235_35632310_35632386_35632516_35632697_35632794_35632924_35664801
transcript_128209.known	chr20	-	748	8	FSM	ENSG00000214078.13	ENST00000439806.6	748	8	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_7	258.420713771405	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCTGCAGGCAGTCCCG	-35641348	True	NA	NA	False	NA	NA	NA	35664932	35631511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35631579_35631687_35631778_35631944_35632026_35632162_35632235_35632310_35632386_35632516_35632697_35632794_35632924_35664878
transcript_12821.nic	chr1	+	3514	10	NIC	ENSG00000171943.12	novel	7091	10	NA	NA	-17	1317	combination_of_known_junctions	FALSE	canonical	3	74	junction_7	72.6133001455291	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCACCATCATCATTAAT	121181357	True	NA	NA	False	AATAAA	-14	NA	121184957	121389283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_121185125_121186904_121187514_121284802_121284996_121324477_121324641_121365292_121365356_121373970_121374187_121374825_121374955_121382703_121382926_121386505_121386608_121387633
transcript_128210.known	chr20	+	366	3	FSM	ENSG00000125995.16	ENST00000374077.8	366	3	0	0	0	0	multi-exon	FALSE	canonical	3	1885	junction_1	1031	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGTCCCTCTCTTAAA	35681936	True	NA	16	True	AATAAA	-17	NA	35699404	35700980	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_35699457_35699632_35699764_35700797
transcript_128211.known	chr20	+	498	3	FSM	ENSG00000125995.16	ENST00000374078.5	498	3	0	0	0	0	multi-exon	FALSE	canonical	3	882	junction_1	1532.5	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCCCTCTCTTAAAGGAA	35699249	False	NA	20	True	AATAAA	-21	NA	35699271	35700984	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_35699452_35699632_35699764_35700797
transcript_128212.known	chr20	+	288	3	FSM	ENSG00000125995.16	ENST00000397416.1	288	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	1964	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGCCAACTACATCTGTC	35681982	True	NA	-54	True	NA	NA	NA	35699450	35700910	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_35699495_35699632_35699764_35700797
transcript_128213.known	chr20	-	5213	3	FSM	ENSG00000244462.8	ENST00000374104.7	5213	3	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_2	226	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAACTACTTTGTTATTT	-35641316	True	NA	-6	True	ATTAAA	-17	NA	35664900	35650325	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35655345_35658929_35658983_35664759
transcript_128214.known	chr20	-	583	3	FSM	ENSG00000244462.8	ENST00000431148.1	583	3	0	0	0	0	multi-exon	FALSE	canonical	2	42	junction_2	277.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAACATACAGACATTT	-35641372	True	NA	NA	False	NA	NA	NA	35664956	35654892	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35655345_35658929_35658983_35664878
transcript_128215.known	chr20	-	6646	3	FSM	ENSG00000244462.8	ENST00000374114.8	6646	3	0	0	0	0	multi-exon	FALSE	canonical	3	460	junction_2	68.5	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAGTACTTTACTGAGCT	-35641316	True	NA	7	True	AATAAA	-32	NA	35664900	35648924	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35655345_35658929_35659015_35664759
transcript_128216.known	chr20	-	1068	3	FSM	ENSG00000244462.8	ENST00000424458.5	1068	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_2	256	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTGTGAAGCCACTCCC	-35641305	True	NA	NA	False	NA	NA	NA	35664889	35654449	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35655345_35658929_35659015_35664801
transcript_128217.known	chr20	-	565	3	FSM	ENSG00000244462.8	ENST00000435161.1	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	278.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCACCACTTCTGTTCA	-35641350	True	NA	NA	False	NA	NA	NA	35664934	35654920	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35655345_35658929_35659015_35664878
transcript_128218.known	chr20	+	496	2	FSM	ENSG00000125995.16	ENST00000336695.4	496	2	0	0	0	0	multi-exon	FALSE	canonical	3	3947	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGTCCCTCTCTTAAA	35681982	True	NA	16	True	AATAAA	-17	NA	35699450	35700980	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_35699764_35700797
transcript_128219.known	chr20	-	625	2	FSM	ENSG00000214078.13	ENST00000462352.5	625	2	0	0	0	0	multi-exon	FALSE	canonical	3	909	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGCCACCACTCTCTT	-35626832	False	NA	-15	True	AATAAA	-17	NA	35626853	35626043	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35626382_35626566
transcript_128238.known	chr20	-	3131	19	FSM	ENSG00000131051.24	ENST00000656873.1	3131	19	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_18	478.702245144278	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTACTGTATTAAGGGG	-35711521	True	NA	NA	False	ATTAAA	-10	NA	35742266	35703223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709275_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35738967_35739018_35740524_35740598_35740823_35740888_35741940_35742114_35742244
transcript_128241.known	chr20	-	2124	18	FSM	ENSG00000131051.24	ENST00000444878.5	2124	18	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_15	397.070736204739	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTGTGCTCATTCTCCC	-35711503	True	NA	-14	True	AATAAA	-15	NA	35742248	35704325	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709257_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35738967_35739018_35740524_35740598_35740823_35740888_35741940
transcript_128243.known	chr20	-	2883	18	FSM	ENSG00000131051.24	ENST00000403542.6	2883	18	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_15	386.861875514561	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGGAGATCTTCATTTTT	-35711529	True	NA	-6	True	AATAAA	-17	NA	35742274	35703610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709275_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35738967_35739018_35740524_35740598_35740823_35740888_35741940
transcript_128249.known	chr20	-	2149	18	FSM	ENSG00000131051.24	ENST00000429968.5	2149	18	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_15	511.710571849518	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTGTGCTCATTCTCCC	-35711511	True	NA	-14	True	AATAAA	-15	NA	35742256	35704325	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709275_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35734185_35734258_35738967_35739018_35740823_35740888_35741940
transcript_128253.known	chr20	-	2831	17	FSM	ENSG00000131051.24	ENST00000361162.10	2831	17	0	0	0	0	multi-exon	FALSE	canonical	3	695	junction_5	267.319148853482	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGAGATCTTCATTTTTC	-35711567	False	NA	-5	True	AATAAA	-18	NA	35742312	35703609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709257_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35738967_35739018_35740823_35740888_35741940
transcript_128257.known	chr20	-	5060	17	FSM	ENSG00000131051.24	ENST00000253363.11	5060	17	0	0	0	0	multi-exon	FALSE	canonical	3	814	junction_5	248.116120747927	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTCCAACCTGGGCGAC	-35711515	True	NA	NA	False	NA	NA	NA	35742260	35701346	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709275_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35738967_35739018_35740823_35740888_35741940
transcript_128270.known	chr20	-	2421	16	FSM	ENSG00000131051.24	ENST00000528062.7	2421	16	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_12	424.297673285579	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGTCTTAAAATTCCAAA	-35711493	True	NA	NA	False	NA	NA	NA	35742238	35703897	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709275_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35731940_35732136_35738967_35739018_35740823_35740888_35741940
transcript_128292.known	chr20	-	644	5	FSM	ENSG00000131051.24	ENST00000442447.5	644	5	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	710.381235675605	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGAGGGTTATTCTCTGG	-35711433	False	NA	93	True	NA	NA	NA	35742178	35731915	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35732136_35734185_35734258_35738967_35739018_35740823_35740888_35741940
transcript_128294.known	chr20	-	1068	5	FSM	ENSG00000131051.24	ENST00000453310.5	1068	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	607.513528655947	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAGTTACTTTTTACCTT	-35711513	True	NA	NA	False	NA	NA	NA	35742258	35734518	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35735082_35738967_35739018_35740524_35740598_35740823_35740888_35741940
transcript_128296.nic	chr20	-	551	4	ISM	ENSG00000131051.24	ENST00000374038.7	1026	9	-26	10176	-10	2	5prime_fragment	FALSE	canonical	3	1128	junction_2	216.675384440001	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGCAAAAGCCGTGAAAGAA	-35711539	True	NA	6	True	NA	NA	NA	35742284	35732042	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_35732136_35738967_35739018_35740823_35740888_35741940
transcript_1283.known	chr1	-	3098	12	FSM	ENSG00000008130.15	ENST00000341991.7	3098	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	178.077334857872	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGGTTAATAACAGCTTT	-1778646	False	NA	NA	False	AATAAA	-20	NA	1778790	1751231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1753061_1753566_1753650_1754050_1754209_1754283_1754384_1754543_1754699_1755373_1755477_1756257_1756344_1756502_1756609_1757180_1757311_1761951_1762036_1765227_1765447_1778745
transcript_128300.nic	chr20	-	547	4	ISM	ENSG00000131051.24	ENST00000453310.5	1068	5	-42	4449	12	135	5prime_fragment	FALSE	canonical	3	429	junction_1	556.695807620483	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTTTTAAGAAGGGGCT	-35711555	True	NA	1	True	NA	NA	NA	35742300	35738967	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_35739018_35740524_35740598_35740823_35740888_35741940
transcript_128303.nic	chr20	-	576	3	ISM	ENSG00000131051.24	ENST00000397370.3	612	4	-170	4092	-90	135	5prime_fragment	FALSE	canonical	3	1128	junction_1	263.5	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTTTTAAGAAGGGGCT	NA	False	NA	1	True	NA	NA	NA	35742402	35738967	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_35739018_35740823_35740888_35741940
transcript_128304.known	chr20	-	861	3	FSM	ENSG00000131051.24	ENST00000461849.1	861	3	0	0	0	0	multi-exon	FALSE	canonical	3	525	junction_1	565	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTAATTAGGCCCTAC	-35711493	True	NA	NA	False	NA	NA	NA	35742238	35740098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35740598_35740823_35740888_35741940
transcript_128308.known	chr20	-	1026	9	FSM	ENSG00000131051.24	ENST00000374038.7	1026	9	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_4	463.149527015844	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGCTGCAGCAATGGCAA	-35711513	True	NA	-29	True	NA	NA	NA	35742258	35721866	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35721878_35724569_35724723_35725037_35725156_35729311_35729363_35729461_35729528_35731940_35732136_35738967_35739018_35740823_35740888_35741940
transcript_128309.known	chr20	-	869	4	FSM	ENSG00000131051.24	ENST00000463098.5	869	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	681.811313096715	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTATTCCTGTTCCCTTT	-35711482	True	NA	NA	False	AGTAAA	-28	NA	35742227	35739102	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35739548_35740524_35740598_35740823_35740888_35741940
transcript_128311.known	chr20	+	1814	12	FSM	ENSG00000025293.17	ENST00000374000.8	1814	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	79.9088323503936	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAAACCTGGTAATTTT	35766717	True	NA	NA	False	AAAAAG	-14	NA	35772025	35913335	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_35772080_35800093_35800174_35801490_35801606_35842572_35842745_35847349_35847435_35858301_35858382_35863012_35863401_35869437_35869552_35870954_35871135_35871649_35871830_35899369_35899649_35913248
transcript_128313.nic	chr20	+	1818	11	ISM	ENSG00000025293.17	ENST00000374012.8	5879	18	-73	37035	-32	0	5prime_fragment	FALSE	canonical	3	180	junction_10	29.0957041502693	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAAACCTGGTAATTTT	35766633	True	NA	NA	False	AAAAAG	-14	NA	35771941	35913335	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_35772080_35801490_35801606_35842572_35842745_35847349_35847435_35858301_35858382_35863012_35863401_35869437_35869552_35870954_35871135_35871649_35871830_35899369_35899649_35913248
transcript_128315.nic	chr20	+	1731	10	ISM	ENSG00000025293.17	ENST00000374012.8	5879	18	-73	50722	-32	123	5prime_fragment	FALSE	canonical	3	197	junction_9	25.1881806497501	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTATCTTCATTCTTCA	35766633	True	NA	NA	False	NA	NA	NA	35771941	35899648	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_35772080_35801490_35801606_35842572_35842745_35847349_35847435_35858301_35858382_35863012_35863401_35869437_35869552_35870954_35871135_35871649_35871830_35899369
transcript_128319.known	chr20	+	1635	10	FSM	ENSG00000025293.17	ENST00000481202.5	1635	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	76.1715088824693	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAGAAAAAGAA	35766717	True	NA	NA	False	AATAAA	-43	NA	35772025	35913316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_35772080_35801490_35801606_35842572_35842745_35847349_35847435_35863012_35863401_35869437_35869552_35870954_35871135_35871649_35871830_35899369_35899649_35913248
transcript_12832.known	chr1	-	748	5	FSM	ENSG00000188610.12	ENST00000452190.2	748	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	137.729807957464	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATGATATATATGATATAC	NA	False	NA	NA	False	GATAAA	-6	NA	121184292	121168734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_121168836_121177207_121177333_121181270_121181349_121183337_121183470_121183980
transcript_128326.nic	chr20	+	967	7	ISM	ENSG00000025293.17	ENST00000374012.8	5879	18	-14	80885	-11	-1635	5prime_fragment	FALSE	canonical	3	231	junction_5	19.4307888557196	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGGAAAATATCAAAA	35766692	True	NA	NA	False	NA	NA	NA	35772000	35869485	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_35772080_35801490_35801606_35842572_35842745_35847349_35847435_35858301_35858382_35863012_35863401_35869437
transcript_128329.nnic	chr20	+	570	4	NNC	ENSG00000025293.17	novel	832	6	NA	NA	-32	21505	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	123.036579926459	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGTGTGGTGGTGTGTG	35766633	True	NA	NA	False	AATAAA	-14	NA	35771941	35823477	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_35772080_35801490_35801606_35812622_35812720_35823257
transcript_12833.known	chr1	-	1773	4	FSM	ENSG00000188610.12	ENST00000355228.8	1773	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	110.665662646048	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCTTCCTTTAATTTTT	-121183855	False	NA	NA	False	AATAAA	-18	NA	121183911	121167719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_121168836_121177207_121177333_121181270_121181349_121183457
transcript_128330.nnic	chr20	+	450	3	NNC	ENSG00000025293.17	novel	832	6	NA	NA	-32	21482	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_2	105.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCATAATAAAAGTAATAATA	35766633	True	NA	NA	False	NA	NA	NA	35771941	35823454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_35772080_35801490_35801606_35823257
transcript_128332.known	chr20	+	618	2	FSM	ENSG00000025293.17	ENST00000617560.1	618	2	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATACTTTGTCTCTTTCT	35766724	True	NA	11	True	AATAAA	-22	NA	35772032	35775058	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_35772080_35774487
transcript_128333.known	chr20	+	5879	18	FSM	ENSG00000025293.17	ENST00000374012.8	5879	18	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_13	29.9511713353562	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCAGTTACGTATTGTT	35766706	True	NA	10	True	AATAAA	-18	NA	35772014	35950370	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_35772080_35801490_35801606_35842572_35842745_35847349_35847435_35858301_35858382_35863012_35863401_35869437_35869552_35870954_35871135_35871649_35871830_35899369_35899649_35913248_35913348_35914032_35914198_35917483_35917663_35927779_35927880_35931248_35931445_35938696_35939109_35940863_35941048_35947484
transcript_128334.known	chr20	-	771	2	FSM	ENSG00000171222.11	ENST00000305978.7	771	2	0	0	0	0	multi-exon	FALSE	canonical	3	592	junction_1	0	820	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTCTGGTGTGTCTCTT	-35945125	True	NA	-5	True	AATGAA	-21	NA	35954502	35953623	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_35954340_35954447
transcript_128335.known	chr20	+	662	1	FSM	ENSG00000149646.12	ENST00000614708.1	662	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTTTTTACTTTTTAA	35954392	True	NA	4	True	AATAAA	-17	NA	35954706	35955368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_35954700_35955400
transcript_128336.known	chr20	-	5401	1	FSM	ENSG00000260032.2	ENST00000565493.2	5401	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTCGTTGCTTGTAGAAT	-36051006	False	NA	-6	True	AATAAA	-25	NA	36051018	36045617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_36045600_36051000
transcript_128340.nic	chr20	+	3479	21	NIC	ENSG00000088367.23	novel	8418	25	NA	NA	-127	69	combination_of_known_junctions	FALSE	canonical	3	20	junction_13	34.6105114091081	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCCCACTTGGAAAGAAAG	36153139	True	NA	NA	False	AAAAAG	-5	NA	36154612	36229914	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_36154897_36173763_36173955_36175550_36175716_36177951_36178057_36178629_36178673_36182271_36182348_36185116_36185336_36187675_36187764_36188346_36188500_36190276_36190375_36190621_36190798_36194211_36194361_36197858_36198042_36209487_36209899_36212271_36212377_36214359_36214441_36218875_36218963_36219760_36219845_36221863_36221945_36222277_36222395_36229331
transcript_12835.known	chr1	-	2396	4	FSM	ENSG00000188610.12	ENST00000369390.7	2396	4	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	74.1994309651735	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATAAGGCTAATGTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	121184340	121167645	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_121168836_121177207_121177333_121181270_121181349_121183337
transcript_128354.nic	chr20	+	3484	20	NIC	ENSG00000088367.23	novel	6276	22	NA	NA	-127	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_14	31.6297836428958	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATGAAGCTGACATTCT	36153139	True	NA	3	True	AATAAA	-11	NA	36154612	36230327	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_36154897_36173763_36173955_36175550_36175716_36177951_36178057_36178629_36178673_36182271_36182348_36185116_36185336_36187675_36187764_36188346_36188500_36190276_36190375_36190621_36190798_36194211_36194361_36197858_36198042_36212271_36212377_36214356_36214441_36218875_36218963_36219760_36219845_36221863_36221945_36222277_36222395_36229331
transcript_128357.nic	chr20	+	3481	20	NIC	ENSG00000088367.23	novel	8418	25	NA	NA	-127	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	29.320088506478	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATGAAGCTGACATTCT	36153139	True	NA	3	True	AATAAA	-11	NA	36154612	36230327	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_36154897_36173763_36173955_36175550_36175716_36177951_36178057_36178629_36178673_36182271_36182348_36185116_36185336_36187675_36187764_36188346_36188500_36190276_36190375_36190621_36190798_36194211_36194361_36197858_36198042_36212271_36212377_36214359_36214441_36218875_36218963_36219760_36219845_36221863_36221945_36222277_36222395_36229331
transcript_128368.nic	chr20	+	3298	19	NIC	ENSG00000088367.23	novel	6276	22	NA	NA	-132	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_13	29.1128074145307	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATGAAGCTGACATTCT	36153134	True	NA	3	True	AATAAA	-11	NA	36154607	36230327	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_36154897_36175550_36175716_36177951_36178057_36178629_36178673_36182271_36182348_36185116_36185336_36187675_36187764_36188346_36188500_36190276_36190375_36190621_36190798_36194211_36194361_36197858_36198042_36212271_36212377_36214356_36214441_36218875_36218963_36219760_36219845_36221863_36221945_36222277_36222395_36229331
transcript_128372.nic	chr20	+	3295	19	NIC	ENSG00000088367.23	novel	8418	25	NA	NA	-132	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_13	26.287407209114	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATGAAGCTGACATTCT	36153134	True	NA	3	True	AATAAA	-11	NA	36154607	36230327	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_36154897_36175550_36175716_36177951_36178057_36178629_36178673_36182271_36182348_36185116_36185336_36187675_36187764_36188346_36188500_36190276_36190375_36190621_36190798_36194211_36194361_36197858_36198042_36212271_36212377_36214359_36214441_36218875_36218963_36219760_36219845_36221863_36221945_36222277_36222395_36229331
transcript_128377.nic	chr20	+	2731	19	NIC	ENSG00000088367.23	novel	6276	22	NA	NA	-127	-187	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	26.6238661150777	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATATAATAACTATAATCC	36153139	True	NA	NA	False	AAGAAA	-6	NA	36154612	36229658	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_36154897_36173763_36173955_36175550_36175716_36177951_36178057_36178629_36178673_36182271_36182348_36185116_36185336_36187675_36187764_36188346_36188500_36190276_36190375_36190621_36190798_36194211_36194361_36197858_36198042_36212271_36212377_36218875_36218963_36219760_36219845_36221863_36221945_36222277_36222395_36229331
transcript_128380.nic	chr20	+	3400	19	NIC	ENSG00000088367.23	novel	6276	22	NA	NA	-127	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	26.6238661150777	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATGAAGCTGACATTCT	36153139	True	NA	3	True	AATAAA	-11	NA	36154612	36230327	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_36154897_36173763_36173955_36175550_36175716_36177951_36178057_36178629_36178673_36182271_36182348_36185116_36185336_36187675_36187764_36188346_36188500_36190276_36190375_36190621_36190798_36194211_36194361_36197858_36198042_36212271_36212377_36218875_36218963_36219760_36219845_36221863_36221945_36222277_36222395_36229331
transcript_128384.nic	chr20	+	2545	18	NIC	ENSG00000088367.23	novel	6276	22	NA	NA	-132	-187	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	22.2363834155837	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATATAATAACTATAATCC	36153134	True	NA	NA	False	AAGAAA	-6	NA	36154607	36229658	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_36154897_36175550_36175716_36177951_36178057_36178629_36178673_36182271_36182348_36185116_36185336_36187675_36187764_36188346_36188500_36190276_36190375_36190621_36190798_36194211_36194361_36197858_36198042_36212271_36212377_36218875_36218963_36219760_36219845_36221863_36221945_36222277_36222395_36229331
transcript_128387.nic	chr20	+	3214	18	NIC	ENSG00000088367.23	novel	6276	22	NA	NA	-132	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	22.2363834155837	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATGAAGCTGACATTCT	36153134	True	NA	3	True	AATAAA	-11	NA	36154607	36230327	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_36154897_36175550_36175716_36177951_36178057_36178629_36178673_36182271_36182348_36185116_36185336_36187675_36187764_36188346_36188500_36190276_36190375_36190621_36190798_36194211_36194361_36197858_36198042_36212271_36212377_36218875_36218963_36219760_36219845_36221863_36221945_36222277_36222395_36229331
transcript_128405.known	chr20	+	2561	5	FSM	ENSG00000131043.13	ENST00000680247.1	2561	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	115.770246609394	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGAGACAATCCCCTTG	36232923	True	NA	17	True	ATTAAA	-7	NA	36236477	36256921	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_36236504_36236881_36237038_36239820_36240626_36244696_36244927_36255577
transcript_128407.known	chr20	+	3187	5	FSM	ENSG00000131043.13	ENST00000680639.1	3187	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	116.279834881204	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGAGACAATCCCCTTG	36236120	False	NA	17	True	ATTAAA	-7	NA	36236130	36256921	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_36236783_36236881_36237038_36239820_36240626_36244696_36244927_36255577
transcript_128411.known	chr20	+	2417	4	FSM	ENSG00000131043.13	ENST00000320849.9	2417	4	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	52.6265670128269	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTTGTGTGTGTGTGTC	36232923	True	NA	29	True	ATTAAA	-19	NA	36236477	36256933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_36236504_36239820_36240626_36244696_36244927_36255577
transcript_128414.known	chr20	+	2689	4	FSM	ENSG00000131043.13	ENST00000373932.3	2689	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	111.613420140929	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTTGTGTGTGTGTGTC	36232930	True	NA	29	True	ATTAAA	-19	NA	36236484	36256933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_36236783_36239820_36240626_36244696_36244927_36255577
transcript_128415.known	chr20	+	1412	2	FSM	ENSG00000131043.13	ENST00000681771.1	1412	2	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTACGTTCCTTTTTTTCTG	36232923	True	NA	NA	False	TTTAAA	-13	NA	36236477	36241206	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_36236504_36239820
transcript_128418.known	chr20	+	2863	4	FSM	ENSG00000131043.13	ENST00000680811.1	2863	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	110.203851515675	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAGACAATCCCCTTGT	36232929	True	NA	18	True	ATTAAA	-8	NA	36236483	36256922	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_36236967_36239820_36240626_36244696_36244927_36255577
transcript_128422.known	chr20	+	5058	13	FSM	ENSG00000080845.19	ENST00000339266.10	5058	13	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_2	166.332226950228	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGGGCTTGTGGCATTAT	36306100	True	NA	23	True	AATAAA	-15	NA	36306338	36528633	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_36306513_36367044_36367276_36431645_36432717_36436108_36436351_36439753_36439869_36442726_36442778_36446696_36446938_36496704_36497067_36499587_36499677_36500198_36500612_36524249_36524342_36525850_36526007_36526812
transcript_12843.known	chr1	+	2675	2	FSM	ENSG00000232721.3	ENST00000443018.3	2743	2	68	0	68	0	multi-exon	FALSE	canonical	2	18	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGATGGTACCTGGTTTT	143736032	False	NA	NA	False	AATAAA	-16	NA	143736065	143739506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_143736124_143736889
transcript_12844.known	chr1	-	2616	2	FSM	ENSG00000273213.4	ENST00000609879.2	2616	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATACGTGATTATTTTTCC	NA	False	NA	-2	True	ATTAAA	-15	NA	143905966	143902386	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_143904591_143905554
transcript_128441.known	chr20	+	3110	7	FSM	ENSG00000080845.19	ENST00000475894.5	3110	7	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	36.9628191565524	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTGTGGCATTATTGCA	36461327	False	NA	27	True	AATAAA	-19	NA	36461337	36528637	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_36461511_36496704_36497067_36499587_36499677_36500198_36500612_36524249_36524342_36525850_36526007_36526812
transcript_128446.nic	chr20	+	1297	6	ISM	ENSG00000080845.19	ENST00000475894.5	3110	7	-24	2643	-24	-853	5prime_fragment	FALSE	canonical	3	255	junction_1	40.4840709415444	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAGAGGAAGGTGAGCAT	36461299	False	NA	NA	False	NA	NA	NA	36461313	36525994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_36461511_36496704_36497067_36499587_36499677_36500198_36500612_36524249_36524342_36525850
transcript_128454.known	chr20	+	2392	7	FSM	ENSG00000080845.19	ENST00000340491.8	2392	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	123.844885060125	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAACAAAAATCACGAAACT	36458322	False	NA	NA	False	NA	NA	NA	36461746	36527239	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_36462600_36496704_36497067_36499587_36499677_36500198_36500612_36524249_36524342_36525850_36526007_36526812
transcript_12847.known	chr1	-	2395	4	FSM	ENSG00000263513.6	ENST00000584486.6	2395	4	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_2	85.5686858611256	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGGCTAATGTTTATTG	NA	False	NA	NA	False	AATAAA	-20	NA	143971986	143955286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_143956482_143964854_143964980_143968923_143969002_143970989
transcript_128470.known	chr20	+	2786	4	FSM	ENSG00000101335.10	ENST00000279022.7	2786	4	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_2	28.4057897071863	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTGCAGCATATTTAACA	36533048	True	NA	9	True	ATTAAA	-25	NA	36541518	36551447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_36541562_36544858_36545069_36548031_36548194_36549076
transcript_128471.nnic	chr20	+	1103	4	NNC	ENSG00000101335.10	novel	2786	4	NA	NA	-18	-6	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	159.918729359634	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTCTGGTCTGTGTGTCT	36533008	True	NA	28	True	AATAGA	-12	NA	36541478	36549819	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_36541562_36544858_36545069_36548126_36548194_36549076
transcript_128476.known	chr20	+	1024	3	FSM	ENSG00000101335.10	ENST00000346786.2	1024	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	156.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTGTGTGTCTGTGGCT	36533026	True	NA	34	True	AATAGA	-18	NA	36541496	36549825	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_36541562_36544858_36545069_36549076
transcript_128479.known	chr20	+	918	5	FSM	ENSG00000259399.1	ENST00000558530.1	918	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	541.632947668437	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGATTCTCCATCGGGTG	36572882	True	NA	3	True	ATTAAA	-8	NA	36574552	36612384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_36574636_36578740_36578967_36607714_36607819_36609600_36609731_36612009
transcript_128481.known	chr20	+	1170	5	FSM	ENSG00000101084.19	ENST00000483815.5	1170	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	579.342299508676	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTGATGATACCTGATA	36594709	True	NA	36	True	AATAAA	-20	NA	36605788	36612557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_36606066_36607714_36607819_36607889_36608001_36609600_36609731_36612009
transcript_128484.nnic	chr20	+	3279	4	NNC	ENSG00000118707.11	novel	3416	3	NA	NA	-19	0	intron_retention	FALSE	non_canonical	0	0	junction_3	156.008546774421	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGTTCTTGATTGATCCA	36573444	False	NA	38	True	AATAAA	-28	NA	36573468	36593950	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_36573746_36578740_36578967_36590909_36592685_36592949
transcript_128486.known	chr20	+	1301	4	FSM	ENSG00000118707.11	ENST00000650844.1	1301	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	177.96691327947	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTCCTATGTTGGGTCC	36573692	False	NA	NA	False	NA	NA	NA	36573722	36591772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_36573746_36576214_36576404_36578740_36578967_36590909
transcript_128487.nnic	chr20	+	3129	4	NNC	ENSG00000118707.11	novel	3344	3	NA	NA	-45	0	intron_retention	FALSE	non_canonical	0	0	junction_3	157.451227016143	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGTTCTTGATTGATCCA	36572838	True	NA	38	True	AATAAA	-28	NA	36574508	36593950	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_36574636_36578740_36578967_36590909_36592685_36592949
transcript_128490.known	chr20	+	1044	4	FSM	ENSG00000101084.19	ENST00000492721.5	1044	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	567.703169701288	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTGATGATACCTGATA	36594705	True	NA	36	True	AATAAA	-20	NA	36605784	36612557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_36606066_36607714_36607819_36607889_36608001_36612009
transcript_128491.known	chr20	+	1069	4	FSM	ENSG00000101084.19	ENST00000344795.8	1069	4	0	0	0	0	multi-exon	FALSE	canonical	3	1062	junction_2	82.0609529557146	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTGATGATACCTGATA	36594699	True	NA	36	True	AATAAA	-20	NA	36605778	36612557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_36606066_36607714_36607819_36609600_36609731_36612009
transcript_128496.known	chr20	+	3432	3	FSM	ENSG00000118707.11	ENST00000373874.6	3432	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	181	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGTTCTTGATTGATCCA	36573463	False	NA	38	True	AATAAA	-28	NA	36573487	36593950	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_36573653_36578740_36578967_36590909
transcript_128499.known	chr20	+	3416	3	FSM	ENSG00000118707.11	ENST00000373872.9	3416	3	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	91	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGTTCTTGATTGATCCA	36569663	True	NA	38	True	AATAAA	-28	NA	36573596	36593950	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_36573746_36578740_36578967_36590909
transcript_1285.nic	chr1	-	3334	12	NIC	ENSG00000008130.15	novel	3235	12	NA	NA	-116	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	162.740070598831	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGGTTAATAACAGCTTT	-1779995	False	NA	NA	False	AATAAA	-20	NA	1780185	1751231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_1753061_1753566_1753650_1754050_1754209_1754283_1754384_1754543_1754699_1755373_1755477_1756257_1756344_1756502_1756609_1757180_1757311_1761951_1762036_1765227_1765447_1779904
transcript_12850.known	chr1	-	1658	3	FSM	ENSG00000263513.6	ENST00000369175.4	1658	3	0	0	0	0	multi-exon	FALSE	canonical	2	47	junction_1	133.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCAGGAAATAGAATAAATT	NA	False	NA	NA	False	NA	NA	NA	143971965	143955877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_143956482_143968923_143969002_143970989
transcript_128506.known	chr20	+	3344	3	FSM	ENSG00000118707.11	ENST00000611732.4	3344	3	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	118.5	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACAGGGTTCTTGATTG	36572883	True	NA	33	True	AATAAA	-23	NA	36574553	36593945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_36574636_36578740_36578967_36590909
transcript_128510.known	chr20	+	923	3	FSM	ENSG00000118707.11	ENST00000560025.1	923	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	191	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCATCTGCCAAGAAGGGT	36574659	False	NA	NA	False	NA	NA	NA	36574671	36591429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_36574849_36578740_36578967_36590909
transcript_128512.known	chr20	+	896	3	FSM	ENSG00000101084.19	ENST00000342422.3	896	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	596.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTGATGATACCTGATA	36594742	True	NA	36	True	AATAAA	-20	NA	36605821	36612557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_36606066_36607714_36607819_36612009
transcript_128517.known	chr20	-	2971	16	FSM	ENSG00000101079.21	ENST00000349004.6	2971	16	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_13	17.20258378526	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTGCTGGTGTTATTT	-36744378	True	NA	-6	True	AATAAA	-22	NA	36746090	36651770	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_36653702_36656359_36656412_36656496_36656533_36660336_36660385_36665045_36665098_36665235_36665302_36666288_36666393_36671340_36671398_36680815_36680903_36682517_36682579_36684412_36684476_36687491_36687613_36688678_36688785_36706971_36707008_36721678_36721784_36746044
transcript_128519.known	chr20	-	2917	15	FSM	ENSG00000101079.21	ENST00000359675.6	2917	15	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_13	39.2311959375938	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGTGTTATTTCTTTC	-36744355	True	NA	-1	True	AATAAA	-27	NA	36746067	36651765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_36653702_36656359_36656412_36656496_36656533_36660336_36660385_36665045_36665098_36665235_36665302_36666288_36666393_36671340_36671398_36680815_36680903_36682517_36682579_36684412_36684476_36687491_36687613_36688678_36688785_36721678_36721784_36746044
transcript_12852.nnic	chr1	+	3556	3	Fusion	ENSG00000270872.2_ENSG00000289318.1	novel	631	2	NA	NA	-33	-19789	multi-exon	FALSE	canonical	2	16	junction_2	27.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAAGTTCAGAGAATAGC	NA	False	NA	NA	False	AAAAAG	-15	NA	143972635	144048561	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr1_+_143972767_143974543_143975154_144045746
transcript_128523.known	chr20	-	2075	12	FSM	ENSG00000149636.16	ENST00000473615.5	2075	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	76.3304040242969	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTTTTGAGTGTATAA	-36770076	True	NA	-3	True	ATTAAA	-19	NA	36773797	36751794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872_36770975_36771114_36771194_36771424_36771474_36773661
transcript_128529.known	chr20	-	1922	11	FSM	ENSG00000149636.16	ENST00000373740.7	1922	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_9	75.9447167352674	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTTTTGAGTGTATAA	-36769999	True	NA	-3	True	ATTAAA	-19	NA	36773720	36751794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872_36770978_36771424_36771474_36773661
transcript_128531.known	chr20	-	2441	11	FSM	ENSG00000149636.16	ENST00000426836.5	2441	11	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_10	71.4401147815427	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTTGAGTGTATAAACAA	-36770030	True	NA	1	True	ATTAAA	-23	NA	36773751	36751790	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872_36771194_36771424_36771474_36773393
transcript_128532.known	chr20	-	2181	11	FSM	ENSG00000149636.16	ENST00000373750.9	2181	11	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_9	30.4934419178944	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTTTTGAGTGTATAA	-36770042	True	NA	-3	True	ATTAAA	-19	NA	36773763	36751794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872_36771194_36771424_36771474_36773661
transcript_128549.known	chr20	-	2129	10	FSM	ENSG00000149636.16	ENST00000448110.6	2129	10	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_9	73.7278947830182	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTTTTGAGTGTATAA	-36770039	True	NA	-3	True	ATTAAA	-19	NA	36773760	36751794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872_36771194_36773661
transcript_128550.known	chr20	-	2447	10	FSM	ENSG00000149636.16	ENST00000480153.5	2447	10	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_6	27.4702982137183	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTTTTGAGTGTATAA	-36770077	True	NA	-3	True	ATTAAA	-19	NA	36773798	36751794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872_36771474_36773661
transcript_128552.known	chr20	-	1915	10	FSM	ENSG00000149636.16	ENST00000373734.8	1915	10	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_8	73.4193098696004	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTTTTGAGTGTATAA	-36770097	True	NA	-3	True	ATTAAA	-19	NA	36773818	36751794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36771424_36771474_36773661
transcript_128572.known	chr20	-	3209	17	FSM	ENSG00000101347.11	ENST00000646869.1	3209	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	44.7974172665121	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGCAAAACAACTTGAATC	-36947720	True	NA	-50	True	NA	NA	NA	36951714	36890903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_36891808_36892578_36893067_36897821_36897960_36898439_36898545_36904156_36904250_36905363_36905504_36911217_36911334_36912460_36912553_36916721_36916831_36916948_36917050_36919363_36919520_36927181_36927253_36930759_36930876_36935028_36935190_36941038_36941112_36946737_36946805_36951435
transcript_128573.nnic	chr20	-	3726	17	NNC	ENSG00000101347.11	novel	4672	17	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.7974172665121	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTTGCTATTTGTATAA	-36947687	True	NA	NA	False	AAGAAA	-32	NA	36951681	36890388	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_36891819_36892554_36893067_36897821_36897960_36898439_36898545_36904156_36904250_36905363_36905504_36911217_36911334_36912460_36912553_36916721_36916831_36916948_36917050_36919363_36919520_36927181_36927253_36930759_36930876_36935028_36935190_36941038_36941112_36946737_36946805_36951435
transcript_128577.known	chr20	-	4649	16	FSM	ENSG00000101347.11	ENST00000646673.2	4649	16	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_7	22.338208423138	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTCCATCTTGAAAGTTG	-36947714	True	NA	-28	True	AATAAA	-15	NA	36951708	36890228	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_36893067_36897821_36897960_36898439_36898545_36904156_36904250_36905363_36905504_36911217_36911334_36912460_36912553_36916721_36916831_36916948_36917050_36919363_36919520_36927181_36927253_36930759_36930876_36935028_36935190_36941038_36941112_36946737_36946805_36951435
transcript_12858.known	chr1	-	4535	20	FSM	ENSG00000266338.7	ENST00000488031.6	4535	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	16.6808065596129	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATTTTCTAATCTCTT	-144460955	True	NA	NA	False	AATAAA	-16	NA	144461647	144421389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_144423257_144423869_144423976_144424689_144424863_144425516_144425569_144426277_144426451_144427046_144427099_144427817_144427991_144428605_144428658_144429699_144429864_144433772_144433825_144435110_144435317_144435780_144435854_144436894_144437110_144437944_144438048_144439828_144440039_144440140_144440296_144448774_144448917_144450771_144450803_144456536_144456806_144461380
transcript_128580.known	chr20	-	3312	15	FSM	ENSG00000101347.11	ENST00000642186.1	3312	15	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_8	45.8475735453906	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTACCTTGCCTATTTT	-36947714	True	NA	-54	True	AAGAAA	-38	NA	36951708	36892739	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_36893067_36897821_36897960_36898439_36898545_36904156_36904250_36905363_36905504_36911217_36912553_36916721_36916831_36916948_36917097_36919363_36919520_36927181_36927253_36930759_36930876_36935028_36935190_36941038_36941112_36946737_36946805_36951435
transcript_128581.known	chr20	-	4334	15	FSM	ENSG00000101347.11	ENST00000262878.5	4334	15	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	46.5655671158027	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATCGCTTGAATCCGGGA	NA	False	NA	NA	False	NA	NA	NA	36951843	36890573	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_36893067_36897821_36897960_36904156_36904250_36905363_36905504_36911217_36911334_36912460_36912553_36916721_36916831_36916948_36917050_36919363_36919520_36927181_36927253_36930759_36930876_36935028_36935190_36941038_36941112_36946737_36946805_36951435
transcript_128582.known	chr20	-	1671	14	FSM	ENSG00000101347.11	ENST00000646066.1	1671	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	48.5522959682339	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTGTAGTCAGTTGTTT	-36947649	True	NA	NA	False	TTTAAA	-16	NA	36951643	36892931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_36893067_36897821_36897960_36898439_36898545_36904156_36904250_36905363_36905504_36911217_36911334_36912460_36912553_36919363_36919520_36927181_36927253_36930759_36930876_36935028_36935190_36941038_36941112_36946737_36946805_36951435
transcript_128583.known	chr20	-	5686	22	FSM	ENSG00000080839.12	ENST00000373664.8	5686	22	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_11	8.1627437475109	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTCTGTATGACTGGA	-37093922	True	NA	-19	True	AATAAA	-29	NA	37095997	36996348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_36998930_37003701_37003867_37007410_37007560_37018278_37018370_37020658_37020731_37022649_37022827_37032664_37032877_37035241_37035509_37040152_37040286_37044085_37044251_37047052_37047191_37055552_37055657_37056145_37056259_37061102_37061270_37062083_37062271_37065423_37065474_37066723_37066885_37066992_37067122_37067232_37067298_37067985_37068187_37088988_37089123_37095772
transcript_128600.known	chr20	+	2227	17	FSM	ENSG00000118705.17	ENST00000237530.11	2227	17	0	0	0	0	multi-exon	FALSE	canonical	3	2080	junction_1	274.732988269975	1249	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGGCCTGATTGAGAGCT	37162779	True	NA	NA	False	AATAAA	-18	NA	37179329	37241619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_37179370_37184179_37184374_37198396_37198493_37199049_37199226_37203884_37203961_37204766_37204902_37207272_37207450_37210046_37210166_37213759_37213866_37223877_37223970_37225687_37225803_37228549_37228745_37229972_37230060_37232295_37232392_37234019_37234096_37236579_37236710_37241302
transcript_128639.known	chr20	+	1539	5	FSM	ENSG00000101363.13	ENST00000397152.7	1539	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	189.592160966639	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGTGTTGTCTTTTG	37283799	True	NA	9	True	AATAAA	-21	NA	37289662	37317260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_37289687_37297295_37297535_37298762_37298880_37301207_37301414_37316307
transcript_128643.nnic	chr20	+	1337	4	NIC	ENSG00000101363.13	novel	1539	5	NA	NA	-23	0	combination_of_known_splicesites	FALSE	canonical	3	89	junction_1	170.267110414457	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGTGTTGTCTTTTG	37283762	True	NA	9	True	AATAAA	-21	NA	37289625	37317260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_37289687_37298762_37298880_37301207_37301414_37316307
transcript_128649.known	chr20	+	1191	3	FSM	ENSG00000101363.13	ENST00000373606.8	1191	3	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	186.5	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGTGTTGTCTTTTG	37283791	True	NA	9	True	AATAAA	-21	NA	37289654	37317260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_37289687_37301207_37301414_37316307
transcript_12865.known	chr1	-	2367	10	FSM	ENSG00000196369.12	ENST00000641863.2	6901	10	-199	4733	0	-2740	multi-exon	FALSE	canonical	3	47	junction_7	54.3168573064967	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTAAAAGTTGTATATGT	NA	False	NA	NA	False	NA	NA	NA	145095528	144892020	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_144892382_144893407_144893510_144897115_144897341_144905090_144905220_144905858_144906075_144914691_144914755_144955438_144955602_144995007_144995201_145092834_145093444_145095222
transcript_128651.known	chr20	+	1503	4	FSM	ENSG00000101363.13	ENST00000397151.1	1503	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	218.663109727168	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGTGTTGTCTTTTG	37297265	True	NA	9	True	AATAAA	-21	NA	37297344	37317260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_37297535_37298762_37298880_37301170_37301414_37316307
transcript_128654.nnic	chr20	+	4468	15	FSM	ENSG00000197122.13	ENST00000692112.1	4794	15	-302	628	-302	0	multi-exon	TRUE	canonical	0	0	junction_1	22.7839229031601	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAACAGTTTATTGAACAT	37345789	False	NA	23	True	ATTAAA	-23	NA	37345806	37405422	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_37346256_37347117_37347237_37365203_37365278_37382618_37382787_37384149_37384404_37386074_37386175_37393894_37393994_37394173_37394278_37396161_37396312_37397698_37397855_37400114_37400295_37401601_37401679_37402434_37402589_37402748_37402881_37403170
transcript_128657.nic	chr20	+	4238	15	NIC	ENSG00000197122.13	novel	4794	15	NA	NA	-173	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_5	22.5098617843607	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAACAGTTTATTGAACAT	37345491	True	NA	23	True	ATTAAA	-23	NA	37345935	37405422	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_37346256_37365203_37365278_37382618_37382787_37384149_37384404_37386074_37386175_37386459_37386478_37393894_37393994_37394173_37394278_37396161_37396312_37397698_37397855_37400114_37400295_37401601_37401679_37402434_37402589_37402748_37402881_37403170
transcript_128659.known	chr20	+	4644	14	FSM	ENSG00000197122.13	ENST00000373578.7	4644	14	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_11	10.0701680236066	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTCTGTTCAGTATTA	37345399	True	NA	NA	False	ATTAAA	-21	NA	37346139	37406050	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_37346256_37365203_37365278_37382618_37382787_37384149_37384404_37386074_37386175_37393894_37393994_37394173_37394278_37396161_37396312_37397698_37397855_37400114_37400295_37401601_37401679_37402434_37402589_37402748_37402881_37403170
transcript_128667.nnic	chr20	+	4052	13	NIC	ENSG00000197122.13	novel	4644	14	NA	NA	-173	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_2	18.1972220102105	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAACAGTTTATTGAACAT	37345491	True	NA	23	True	ATTAAA	-23	NA	37345935	37405422	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_37346256_37365203_37365278_37384149_37384404_37386074_37386175_37393894_37393994_37394173_37394278_37396161_37396312_37397698_37397855_37400114_37400295_37401601_37401679_37402434_37402589_37402748_37402881_37403170
transcript_12867.known	chr1	-	7120	10	FSM	ENSG00000196369.12	ENST00000612199.4	7120	10	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_7	57.4194013755019	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAATCCTCAGACTGTTA	NA	False	NA	21	True	ATTAAA	-42	NA	145095528	144887264	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_144892382_144893407_144893510_144897115_144897338_144905090_144905220_144905858_144906075_144914691_144914755_144955438_144955602_144995007_144995201_145092834_145093444_145095222
transcript_128675.known	chr20	+	3851	12	ISM	ENSG00000197122.13	ENST00000373578.7	4644	14	36464	618	-1064	10	3prime_fragment	FALSE	canonical	3	50	junction_9	10.9166640380204	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAACATCTACTGTGTG	NA	False	NA	33	True	ATTAAA	-33	NA	37382603	37405432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_37382787_37384149_37384404_37386074_37386175_37393894_37393994_37394173_37394278_37396161_37396312_37397698_37397855_37400114_37400295_37401601_37401679_37402434_37402589_37402748_37402881_37403170
transcript_128682.known	chr20	+	998	3	FSM	ENSG00000053438.11	ENST00000647955.1	998	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	209.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGATCTTGCTTTTCCCT	37514990	True	NA	44	True	ACTAAA	-29	NA	37521240	37523474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_37521404_37522357_37522385_37522666
transcript_128684.known	chr20	+	895	3	FSM	ENSG00000053438.11	ENST00000649309.1	895	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	203	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTCCTCACTGCCTCCC	37515010	True	NA	-88	True	NA	NA	NA	37521260	37523342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_37521404_37522357_37522434_37522666
transcript_128689.known	chr20	-	588	3	FSM	ENSG00000166619.15	ENST00000445723.5	588	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	8	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCATGATCCCGGCGTTGTG	-37518958	True	NA	NA	False	NA	NA	NA	37527878	37518939	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_37519351_37521318_37521410_37527792
transcript_128690.known	chr20	-	581	3	FSM	ENSG00000166619.15	ENST00000414080.1	581	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	3	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAACTGTTTCCTGTACCA	-37518958	True	NA	NA	False	NA	NA	NA	37527878	37518988	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_37519351_37521318_37521452_37527792
transcript_128691.known	chr20	+	1222	2	FSM	ENSG00000053438.11	ENST00000346199.3	1222	2	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTCTTGTGATTTCT	37514955	True	NA	17	True	NA	NA	NA	37521205	37523690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_37521404_37522666
transcript_128693.known	chr20	-	2018	2	FSM	ENSG00000166619.15	ENST00000373537.7	2018	2	0	0	0	0	multi-exon	FALSE	canonical	3	631	junction_1	0	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGGTTTTATGTGGCT	-37518956	True	NA	-12	True	AATAAA	-16	NA	37527876	37517416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_37519351_37527792
transcript_128697.known	chr20	+	1890	16	FSM	ENSG00000132792.19	ENST00000361383.11	1890	16	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_8	31.0046591480843	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCGGGCCAGTTTTCTTT	37683719	True	NA	14	True	ATTAAA	-14	NA	37694029	37872118	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_37694153_37732878_37733068_37737377_37737485_37746467_37746608_37757558_37757657_37765196_37765291_37767952_37768045_37777344_37777418_37777653_37777713_37779186_37779336_37802866_37803049_37840101_37840200_37842338_37842420_37859898_37860037_37860271_37860345_37871924
transcript_128705.known	chr20	+	1990	17	FSM	ENSG00000132792.19	ENST00000621317.4	1990	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	163.642414562209	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTCTTTGTAGTTAAGC	37693926	True	NA	24	True	ATTAAA	-24	NA	37693954	37872128	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_37694153_37732878_37733068_37737377_37737485_37746467_37746631_37757045_37757050_37757570_37757657_37765196_37765291_37767952_37768045_37777344_37777418_37777653_37777713_37779186_37779336_37802866_37803049_37840101_37840200_37842338_37842420_37859898_37860037_37860271_37860345_37871924
transcript_128707.known	chr20	+	1936	4	FSM	ENSG00000132821.12	ENST00000373461.9	1936	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0.471404520791032	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGGGCAGTGTCTTTCT	37903000	True	NA	NA	False	AATAAA	-16	NA	37903126	37945350	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_37903472_37931634_37931805_37933538_37933590_37943980
transcript_128713.nic	chr20	-	2637	9	NIC	ENSG00000101407.13	novel	3799	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	13	junction_7	136.699430777893	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATCAAAAGCTCACTTTG	-38027963	True	NA	-15	True	AATAAA	-22	NA	38033456	37983021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_37983640_37996374_37996463_37996748_37996954_37999187_37999329_38002627_38002777_38006196_38006398_38011514_38012539_38013699_38013858_38033403
transcript_128715.known	chr20	-	3958	9	FSM	ENSG00000101407.13	ENST00000373448.6	3958	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	180.137274043991	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAAGTTTTTTATTTAA	-38027968	True	NA	0	True	AATAAA	-37	NA	38033461	37983006	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_37983640_37996374_37996463_37996748_37996954_37999187_37999329_38002627_38002777_38006196_38006398_38011514_38013858_38019004_38019145_38033403
transcript_128717.known	chr20	-	3799	8	FSM	ENSG00000101407.13	ENST00000373447.8	3799	8	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_7	35.8437652905506	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCAAAAGCTCACTTTGA	-38027963	True	NA	-14	True	AATAAA	-23	NA	38033456	37983020	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_37983640_37996374_37996463_37996748_37996954_37999187_37999329_38002627_38002777_38006196_38006398_38011514_38013858_38033403
transcript_128733.known	chr20	-	3791	7	FSM	ENSG00000101407.13	ENST00000449821.1	3791	7	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_3	24.644133852366	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATCAAAAGCTCACTTTG	NA	False	NA	-15	True	AATAAA	-22	NA	38013903	37983021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_37983640_37996374_37996463_37996748_37996954_37999187_37999329_38002627_38002777_38006196_38006398_38011514
transcript_128734.known	chr20	-	4970	13	FSM	ENSG00000198959.12	ENST00000361475.7	4970	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2.01900690659762	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTGGGTGCCGAATCCT	-38165195	True	NA	NA	False	AATAAA	-25	NA	38165270	38127384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38130370_38131092_38131230_38132339_38132501_38138112_38138386_38139411_38139655_38141281_38141386_38142063_38142200_38146716_38146895_38147960_38148090_38150938_38151058_38155846_38156090_38161419_38161600_38165188
transcript_128735.known	chr20	-	1862	10	FSM	ENSG00000198959.12	ENST00000468262.5	1862	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	1.74977952755818	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTTATTGCAAGAGTGAG	-38165207	True	NA	NA	False	TATAAA	-15	NA	38165282	38137949	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38138386_38139411_38139655_38141281_38141386_38142063_38142200_38146716_38146895_38147960_38148090_38150938_38151058_38155846_38156090_38161419_38161600_38165188
transcript_128739.nnic	chr20	+	3894	8	NNC	ENSG00000101413.12	novel	3672	7	NA	NA	-251	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	52.4563958863717	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAACATTGTGTGATTTT	NA	False	NA	2	True	AATAAA	-13	NA	38033473	38092358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_38034099_38040434_38040565_38048347_38048482_38057531_38057645_38059393_38059521_38066080_38066257_38089725_38091088_38091131
transcript_12874.known	chr1	+	2423	4	FSM	ENSG00000215784.6	ENST00000400889.3	2423	4	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_2	70.153799295231	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGGCTAATGTTTATTG	NA	False	NA	NA	False	AATAAA	-20	NA	145095973	145112696	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_145097000_145098987_145099066_145103006_145103132_145111502
transcript_128740.known	chr20	+	3672	7	FSM	ENSG00000101413.12	ENST00000373433.9	3672	7	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_2	18.5262576421203	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTGATTTTTTTTTT	38033157	True	NA	8	True	AATAAA	-19	NA	38033745	38092364	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38034099_38040434_38040565_38048347_38048482_38057531_38057645_38059393_38059521_38066080_38066257_38089725
transcript_128752.known	chr20	-	1279	8	FSM	ENSG00000196756.14	ENST00000668054.2	1291	8	6	6	0	0	multi-exon	FALSE	canonical	3	16	junction_4	80.1559704066811	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATGTGCTTCTTAAAT	-38431122	True	NA	-24	True	AATAAA	-13	NA	38435356	38420593	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38425934_38426049_38426418_38426504_38431040_38431113_38434503_38434627_38435026
transcript_128753.known	chr20	-	1230	8	FSM	ENSG00000196756.14	ENST00000664636.1	1230	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	82.1596256176515	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATGTGCTTCTTAAAT	-38431100	True	NA	-24	True	AATAAA	-13	NA	38435334	38420593	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38426418_38426504_38427679_38427767_38431040_38431113_38434503_38434627_38435026
transcript_128756.known	chr20	-	1122	8	FSM	ENSG00000196756.14	ENST00000666419.1	1122	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	85.9000368249666	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGAATTGCTCCATGTGC	-38431149	True	NA	-33	True	AATAAA	-4	NA	38435383	38420602	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38420901_38421005_38421099_38422095_38422242_38425934_38426053_38426418_38426504_38431040_38431113_38434503_38434627_38435196
transcript_128757.known	chr20	-	1200	8	FSM	ENSG00000196756.14	ENST00000657843.1	1200	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	85.1342277506167	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATGTGCTTCTTAAAT	-38431079	True	NA	-24	True	AATAAA	-13	NA	38435313	38420593	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38420901_38421005_38421099_38422095_38422242_38426418_38426504_38427679_38427767_38431040_38431113_38434503_38434627_38435026
transcript_128758.known	chr20	-	1077	8	FSM	ENSG00000196756.14	ENST00000656320.1	1077	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	80.7331204320375	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGCTTCTTAAATCAGT	-38431118	True	NA	-20	True	AATAAA	-17	NA	38435352	38420589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38420901_38421005_38421099_38422091_38422242_38426418_38426504_38427679_38427767_38431040_38431113_38434503_38434627_38435196
transcript_128763.known	chr20	-	1192	7	FSM	ENSG00000196756.14	ENST00000660885.2	1202	7	10	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	71.0656973042081	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTCTTAAATCAGTGA	-38431143	True	NA	-18	True	AATAAA	-19	NA	38435377	38420587	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38426418_38426504_38431040_38431113_38434503_38434627_38435026
transcript_128764.known	chr20	-	1022	7	FSM	ENSG00000196756.14	ENST00000665233.2	1026	7	4	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	73.1355286817259	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTCTTAAATCAGTGA	-38431143	True	NA	-18	True	AATAAA	-19	NA	38435377	38420587	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38426418_38426504_38431040_38431113_38434503_38434627_38435196
transcript_128768.known	chr20	-	1154	7	FSM	ENSG00000196756.14	ENST00000664073.2	1166	7	10	2	0	0	multi-exon	FALSE	canonical	2	6	junction_2	76.7485070430255	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTGCTTCTTAAATCA	-38431118	True	NA	-22	True	AATAAA	-15	NA	38435352	38420591	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38420901_38421005_38421099_38422095_38422242_38426418_38426504_38431040_38431113_38434503_38434627_38435026
transcript_128769.known	chr20	-	960	7	FSM	ENSG00000196756.14	ENST00000436764.7	1010	7	49	1	0	0	multi-exon	FALSE	canonical	2	6	junction_2	78.3717990663025	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTGCTTCTTAAATCA	-38431094	True	NA	-22	True	AATAAA	-15	NA	38435328	38420591	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38420901_38421005_38421099_38422095_38422242_38426418_38426504_38431040_38431113_38434503_38434627_38435196
transcript_128770.known	chr20	-	1724	7	FSM	ENSG00000196756.14	ENST00000662982.2	1728	7	4	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	86.3566570810972	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAATGATGGCACCACTGC	-38431143	True	NA	NA	False	NA	NA	NA	38435377	38419808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38420901_38421005_38421099_38422290_38422369_38426418_38426504_38431040_38431113_38434503_38434627_38435196
transcript_128773.known	chr20	-	923	7	FSM	ENSG00000196756.14	ENST00000417578.7	934	7	9	2	-6	0	multi-exon	FALSE	canonical	1	2	junction_3	86.7571642895015	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTGCTTCTTAAATCA	-38431085	True	NA	-22	True	AATAAA	-15	NA	38435319	38420591	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38420901_38421005_38421099_38425934_38426053_38426418_38426504_38431040_38431113_38434503_38434627_38435196
transcript_128774.nic	chr20	-	1127	7	NIC	ENSG00000196756.14	novel	1173	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_4	82.0947961539314	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTGCTTCTTAAATCA	-38431150	True	NA	-22	True	AATAAA	-15	NA	38435384	38420591	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_38420901_38421005_38421099_38426418_38426504_38427679_38427767_38431040_38431113_38434503_38434627_38435026
transcript_128776.known	chr20	-	2120	7	FSM	ENSG00000196756.14	ENST00000657868.1	2120	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	81.3341871539883	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGCTTCTTAAATCAGTG	-38431140	True	NA	-19	True	AATAAA	-18	NA	38435374	38420588	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38420901_38421005_38422242_38425934_38426049_38426418_38426504_38431040_38431113_38434503_38434627_38435196
transcript_128779.known	chr20	-	1044	6	FSM	ENSG00000196756.14	ENST00000665181.1	1044	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	84.8396133890295	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTGCTTCTTAAATCA	-38431122	True	NA	-22	True	AATAAA	-15	NA	38435356	38420591	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38426418_38426504_38431040_38431113_38435026
transcript_128782.known	chr20	-	1037	6	FSM	ENSG00000196756.14	ENST00000456953.7	1043	6	4	2	0	0	multi-exon	FALSE	canonical	3	114	junction_5	43.9344966967871	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTCTTAAATCAGTGA	-38431143	True	NA	-18	True	AATAAA	-19	NA	38435377	38420587	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38420901_38421005_38421099_38426418_38426504_38431040_38431113_38434503_38434627_38435026
transcript_128783.known	chr20	-	868	6	FSM	ENSG00000196756.14	ENST00000654183.2	874	6	6	0	0	0	multi-exon	FALSE	canonical	3	79	junction_5	52.8454349967904	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTTCTTAAATCAGTGAC	-38431143	True	NA	-17	True	AATAAA	-20	NA	38435377	38420586	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38420901_38421005_38421099_38426418_38426504_38431040_38431113_38434503_38434627_38435196
transcript_128785.known	chr20	-	1979	6	FSM	ENSG00000196756.14	ENST00000658051.1	1979	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	67.1595116122802	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTCTTAAATCAGTGA	-38431112	True	NA	-18	True	AATAAA	-19	NA	38435346	38420587	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38420901_38421005_38422242_38426418_38426504_38431040_38431113_38434503_38434627_38435196
transcript_128788.known	chr20	-	893	5	FSM	ENSG00000196756.14	ENST00000655520.2	897	5	4	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	83.2150827674887	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTCTTAAATCAGTGA	-38431122	True	NA	-18	True	AATAAA	-19	NA	38435356	38420587	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38420901_38421005_38421099_38426418_38426504_38431040_38431113_38435026
transcript_128791.known	chr20	-	1364	9	FSM	ENSG00000196756.14	ENST00000661252.1	1364	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_6	83.0237164911328	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTGCTTCTTAAATCA	-38431118	True	NA	-22	True	AATAAA	-15	NA	38435352	38420591	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38425934_38426049_38426418_38426504_38427679_38427767_38431040_38431113_38434503_38434627_38435026
transcript_128793.known	chr20	+	1068	5	FSM	ENSG00000174365.21	ENST00000667760.2	1076	5	7	1	2	0	multi-exon	FALSE	canonical	3	15	junction_1	23.4773827331754	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTTGTTCTTTCA	38445750	True	NA	13	True	AATAAA	-13	NA	38446681	38450920	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38446949_38447465_38447624_38448661_38448731_38450261_38450448_38450532
transcript_128794.known	chr20	+	967	5	FSM	ENSG00000174365.21	ENST00000359074.9	967	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	27.4863602537695	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTTGTTCTTTCA	38445769	True	NA	13	True	AATAAA	-13	NA	38446700	38450920	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38446941_38447465_38447624_38448661_38448731_38450335_38450448_38450532
transcript_128795.known	chr20	+	1116	5	FSM	ENSG00000174365.21	ENST00000434729.7	1143	5	27	0	2	0	multi-exon	FALSE	canonical	2	4	junction_2	26.3569250862084	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	38445763	True	NA	14	True	AATAAA	-14	NA	38446694	38450921	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38447013_38447465_38447624_38448665_38448731_38450261_38450448_38450532
transcript_128796.known	chr20	+	1046	5	FSM	ENSG00000174365.21	ENST00000421599.6	1093	5	42	5	-2	0	multi-exon	FALSE	canonical	2	4	junction_2	29.7268817739096	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	38445759	True	NA	14	True	AATAAA	-14	NA	38446690	38450921	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38447013_38447465_38447624_38448665_38448731_38450335_38450448_38450532
transcript_128800.known	chr20	+	880	4	FSM	ENSG00000174365.21	ENST00000457218.5	880	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	8.17856276425687	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	38446382	False	NA	14	True	AATAAA	-14	NA	38447313	38450921	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38447624_38448661_38448731_38450335_38450448_38450532
transcript_128801.known	chr20	+	1152	4	FSM	ENSG00000174365.21	ENST00000670898.2	1154	4	2	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	20.5318181259127	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	38445742	True	NA	14	True	AATAAA	-14	NA	38446673	38450921	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38447013_38447465_38447624_38448661_38448731_38450335
transcript_128803.known	chr20	+	1581	3	FSM	ENSG00000174365.21	ENST00000669338.2	1607	3	25	1	0	0	multi-exon	FALSE	canonical	3	53	junction_1	5.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTTGTTCTTTCA	38445765	True	NA	13	True	AATAAA	-13	NA	38446696	38450920	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38447624_38448661_38448731_38450335
transcript_128804.known	chr20	+	3118	3	FSM	ENSG00000174365.21	ENST00000669976.1	3118	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	10	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGTGTTTGGTTTTT	38445768	True	NA	33	True	AATAAA	-33	NA	38446699	38450940	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38447624_38448661_38450448_38450532
transcript_128805.nic	chr20	+	3222	2	ISM	ENSG00000174365.21	ENST00000693500.1	1600	4	-8	2	6	-1	intron_retention	FALSE	canonical	3	53	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGCTGCTTGTTCTTTC	38445728	True	NA	12	True	AATAAA	-12	NA	38446659	38450919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_38447624_38448661
transcript_128806.known	chr20	+	1172	6	FSM	ENSG00000174365.21	ENST00000666020.1	1172	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	31.5620024713262	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	38445756	True	NA	14	True	AATAAA	-14	NA	38446687	38450921	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38446968_38447465_38447624_38447929_38448094_38448661_38448731_38450335_38450448_38450532
transcript_128807.known	chr20	+	2458	3	FSM	ENSG00000174365.21	ENST00000660884.1	2458	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	4.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTGAAACATGCCCTGC	38445827	False	NA	-1	True	NA	NA	NA	38446758	38450906	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38448731_38450335_38450448_38450532
transcript_128809.known	chr20	+	8652	30	FSM	ENSG00000170471.15	ENST00000397042.7	8652	30	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_15	25.1100786999696	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTGTGTGTGCTTTTGG	38469086	True	NA	27	True	ATTAAA	-24	NA	38472815	38578859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38473070_38488402_38488619_38492929_38493133_38497352_38497517_38499446_38499634_38509076_38509209_38516191_38516371_38517505_38517655_38517783_38518001_38521496_38521699_38524777_38524946_38525403_38525519_38525894_38526043_38531166_38531232_38532729_38532860_38535085_38535208_38539775_38539959_38541040_38541193_38546242_38546431_38548688_38548796_38551070_38551224_38553866_38554077_38558294_38558454_38562531_38562698_38565355_38565479_38567095_38567233_38569887_38569997_38570768_38570848_38574149_38574299_38574773
transcript_12881.known	chr1	-	560	4	FSM	ENSG00000272419.6	ENST00000610324.1	560	4	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_2	4.18993502999218	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTCAGCGAACATCGCCTC	-145215688	False	NA	NA	False	NA	NA	NA	145215814	145169035	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_145169087_145169526_145169616_145170941_145171186_145215638
transcript_128812.known	chr20	+	8633	30	FSM	ENSG00000170471.15	ENST00000262879.11	8633	30	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_24	17.3643887776644	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTTTGTGTGTGCTTTTG	38469113	True	NA	26	True	ATTAAA	-23	NA	38472842	38578858	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38473070_38488402_38488619_38492929_38493133_38497352_38497517_38499446_38499634_38509076_38509209_38516191_38516371_38517505_38517655_38517783_38518001_38521496_38521699_38524777_38524946_38525403_38525519_38525894_38526043_38531166_38531232_38532729_38532860_38535073_38535208_38539775_38539959_38541040_38541193_38546242_38546431_38548688_38548796_38551070_38551224_38553866_38554077_38558294_38558454_38562531_38562698_38565358_38565479_38567095_38567233_38569887_38569997_38570768_38570848_38574149_38574299_38574773
transcript_128828.known	chr20	+	2547	9	FSM	ENSG00000101442.10	ENST00000243903.6	2547	9	0	0	0	0	multi-exon	TRUE	canonical	3	107	junction_6	21.2981073102752	183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCCCTCCTCCTATTTT	38746805	True	NA	NA	False	AATAAA	-25	NA	38748459	38772520	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38748854_38750009_38750240_38752130_38752301_38754956_38755175_38755856_38756040_38765401_38765519_38766237_38766378_38767463_38767597_38771558
transcript_12883.known	chr1	-	1015	3	FSM	ENSG00000272419.6	ENST00000621798.4	1015	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTGTGTGATTTTTCAG	-145215932	True	NA	NA	False	AATAAA	-19	NA	145216058	145164098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_145164639_145214676_145214732_145215638
transcript_128838.known	chr20	+	6259	11	FSM	ENSG00000101445.10	ENST00000299824.6	6259	11	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	4.22965719651132	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCTAGTGTGAGTGATTA	38804161	True	NA	16	True	ATTAAA	-25	NA	38805696	38923024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38805793_38835824_38836176_38889594_38889666_38895564_38895711_38900580_38900685_38902667_38902793_38905968_38906095_38906978_38907055_38907805_38907936_38908027_38908194_38918156
transcript_128842.known	chr20	+	2370	4	FSM	ENSG00000101447.15	ENST00000619850.2	2370	4	0	0	0	0	multi-exon	FALSE	canonical	3	538	junction_3	54.3588896951445	1054	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTCCCCCCCTCTGACA	38916501	True	NA	12	True	AATAAA	-21	NA	38926416	38953106	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38926926_38941958_38942127_38947875_38948001_38951538
transcript_128849.known	chr20	-	187	1	FSM	ENSG00000261431.1	ENST00000570096.1	187	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAACTTGTCGACTTCTG	-38961945	True	NA	-4	True	ATTAAA	-26	NA	38962111	38961924	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_38961900_38962100
transcript_12885.known	chr1	-	494	3	FSM	ENSG00000272419.6	ENST00000616993.1	494	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCATCGGAAACTTGTT	-145215746	False	NA	NA	False	AATACA	-34	NA	145215872	145200690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_145200791_145201141_145201302_145215638
transcript_128856.known	chr20	+	3376	23	FSM	ENSG00000101452.15	ENST00000652169.1	3376	23	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_13	31.5800504555781	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAATGTCTTCCCTCCCA	38960123	True	NA	-2	True	AGTAAA	-14	NA	38962349	39039701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38962408_38969080_38969215_38972558_38972652_38983698_38983777_38988792_38988918_38991453_38991516_38992355_38992426_38994820_38994881_39001729_39001843_39002771_39002869_39003748_39003908_39006145_39006357_39010279_39010405_39010511_39010580_39014879_39014935_39018803_39018900_39021840_39021936_39023689_39023768_39025229_39025360_39028417_39028500_39030703_39030776_39034205_39034318_39038498
transcript_128863.known	chr20	+	3318	22	FSM	ENSG00000101452.15	ENST00000484417.5	3318	22	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	21.2000513412291	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGGTTTTCGTGTCTGT	38960133	True	NA	18	True	AGTAAA	-34	NA	38962359	39039721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38962408_38969080_38969215_38972558_38972652_38983698_38983777_38988792_38988918_38991453_38991516_38992355_38992426_38994820_38994881_39001729_39001843_39002771_39002869_39003748_39003908_39006145_39006357_39010279_39010405_39014879_39014935_39018803_39018900_39021840_39021936_39023689_39023768_39025229_39025360_39028417_39028500_39030703_39030776_39034205_39034318_39038498
transcript_128867.known	chr20	+	3314	22	FSM	ENSG00000101452.15	ENST00000252011.8	3314	22	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_17	11.2980643697671	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGGTTTTCGTGTCTGT	38960117	True	NA	18	True	AGTAAA	-34	NA	38962343	39039721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38962408_38969080_38969215_38972558_38972652_38983698_38983777_38988812_38988918_38991453_38991516_38992355_38992426_38994820_38994881_39001729_39001843_39002771_39002869_39003748_39003908_39006145_39006357_39010279_39010405_39014879_39014935_39018803_39018900_39021840_39021936_39023689_39023768_39025229_39025360_39028417_39028500_39030703_39030776_39034205_39034318_39038498
transcript_12888.known	chr1	-	143	2	FSM	ENSG00000272419.6	ENST00000638217.1	143	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTATGGGTGTAGAGTT	-145215600	False	NA	NA	False	NA	NA	NA	145215726	145214676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_145214732_145215638
transcript_128884.known	chr20	+	2347	21	FSM	ENSG00000101452.15	ENST00000373323.8	2347	21	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	23.1418992306163	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCAGCTCTATGGGAAACA	38960117	True	NA	NA	False	NA	NA	NA	38962343	39038847	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_38962408_38969080_38969215_38983698_38983777_38988812_38988918_38991453_38991516_38992355_38992426_38994820_38994881_39001729_39001843_39002771_39002869_39003748_39003908_39006145_39006357_39010279_39010405_39014879_39014935_39018803_39018900_39021840_39021936_39023689_39023768_39025229_39025360_39028417_39028500_39030703_39030776_39034205_39034318_39038498
transcript_12889.known	chr1	-	381	2	FSM	ENSG00000236140.1	ENST00000427732.1	381	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGCGCTACTATTTTAT	NA	False	NA	NA	False	AATAAA	-31	NA	145287755	145286609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_145286871_145287635
transcript_128893.known	chr20	-	3389	1	FSM	ENSG00000204103.4	ENST00000373313.3	3389	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCGTTCGCATGATTTT	-40689033	True	NA	6	True	ATTAAA	-29	NA	40689236	40685847	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_40685800_40689200
transcript_128894.known	chr20	+	5285	33	FSM	ENSG00000124181.15	ENST00000244007.7	5285	33	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	21.0831454825294	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGACTTGTATGCTCTTT	41133327	True	NA	17	True	AATAAA	-21	NA	41136959	41175721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_41137036_41137520_41137859_41159605_41159759_41159869_41159964_41160105_41160154_41162451_41162537_41162641_41162726_41162957_41162993_41163202_41163276_41163377_41163480_41163714_41163834_41163920_41164007_41164080_41164202_41164932_41165102_41165244_41165368_41165449_41165552_41165638_41165827_41166193_41166395_41166475_41166596_41166678_41166860_41167851_41167930_41168766_41168871_41169078_41169176_41169456_41169527_41170111_41170270_41172192_41172290_41172420_41172646_41172728_41172878_41173419_41173535_41173651_41173814_41173922_41174012_41174123_41174312_41174466
transcript_128898.known	chr20	+	7395	32	FSM	ENSG00000124181.15	ENST00000373271.5	7395	32	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_30	19.8469691697177	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCAGACTGCAACTCCTG	41133604	False	NA	2	True	ATTAAA	-14	NA	41137236	41177626	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_41137859_41159605_41159759_41159869_41159964_41160105_41160154_41162451_41162537_41162641_41162726_41162957_41162993_41163202_41163276_41163377_41163480_41163714_41163834_41163920_41164007_41164080_41164202_41164932_41165102_41165244_41165368_41165449_41165552_41165638_41165827_41166193_41166395_41166475_41166596_41166678_41166860_41167851_41167930_41168766_41168871_41169078_41169176_41169456_41169527_41170111_41170270_41172192_41172290_41172420_41172646_41172728_41172878_41173419_41173535_41173651_41173814_41173922_41174012_41174126_41174312_41174466
transcript_128913.known	chr20	+	3734	21	FSM	ENSG00000198900.7	ENST00000361337.3	3734	21	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_3	40.572897357719	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAAGTGTCTGCCTCTTTG	41019765	True	NA	5	True	AATAAA	-21	NA	41028821	41124487	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_41029101_41029430_41029456_41061393_41061491_41076170_41076295_41077581_41077638_41080084_41080181_41081164_41081241_41084461_41084569_41092471_41092588_41097219_41097342_41098214_41098338_41100055_41100244_41101208_41101354_41112781_41112926_41113969_41114156_41115370_41115440_41116277_41116393_41118168_41118297_41121695_41121791_41122005_41122156_41123194
transcript_128915.nic	chr20	+	1243	11	ISM	ENSG00000198900.7	ENST00000361337.3	3734	21	-35	26163	-35	-25986	5prime_fragment	FALSE	canonical	3	192	junction_3	25.7567466889745	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGAGAAACTGGTACTAC	41019730	True	NA	3	True	NA	NA	NA	41028786	41098324	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_41029101_41029430_41029456_41061393_41061491_41076170_41076295_41077581_41077638_41080084_41080181_41081164_41081241_41084461_41084569_41092471_41092588_41097219_41097342_41098214
transcript_128916.nic	chr20	+	859	8	ISM	ENSG00000198900.7	ENST00000681058.1	8092	20	-127	39778	-35	-39778	5prime_fragment	FALSE	canonical	3	192	junction_3	26.4189171555813	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGCCGAAGAAAGAAGAGG	41019730	True	NA	NA	False	AATAAA	-42	NA	41028786	41084532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_41029101_41029430_41029456_41061393_41061491_41076170_41076295_41077581_41077638_41080084_41080181_41081164_41081241_41084461
transcript_128917.nic	chr20	+	773	7	ISM	ENSG00000198900.7	ENST00000681058.1	8092	20	-127	43085	-35	-43085	5prime_fragment	FALSE	canonical	3	192	junction_3	28.1523632321614	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAGAAGAAGAAGAGGTTAG	41019730	True	NA	NA	False	ATTAAA	-34	NA	41028786	41081225	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_41029101_41029430_41029456_41061393_41061491_41076170_41076295_41077581_41077638_41080084_41080181_41081164
transcript_128920.nic	chr20	+	589	5	ISM	ENSG00000198900.7	ENST00000681058.1	8092	20	-127	46700	-35	-46700	5prime_fragment	FALSE	canonical	3	192	junction_3	16.5755844542508	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGAGAAGGAAAATGGCT	41019730	True	NA	NA	False	AATAAA	-1	NA	41028786	41077610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_41029101_41029430_41029456_41061393_41061491_41076170_41076295_41077581
transcript_128922.nic	chr20	+	461	4	ISM	ENSG00000198900.7	ENST00000681058.1	8092	20	-127	48115	-35	-48115	5prime_fragment	FALSE	canonical	3	192	junction_3	7.36357401145817	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACAAAGAGAAGGAGAAGAC	41019730	True	NA	-2	True	CATAAA	-16	NA	41028786	41076195	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_41029101_41029430_41029456_41061393_41061491_41076170
transcript_128923.nic	chr20	+	545	4	ISM	ENSG00000198900.7	ENST00000681058.1	8092	20	-127	48031	-35	-48031	5prime_fragment	FALSE	canonical	3	192	junction_3	7.36357401145817	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CGAAAAGAGGAAAAGGTACA	41019730	True	NA	82	True	CATAAA	-31	NA	41028786	41076279	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_41029101_41029430_41029456_41061393_41061491_41076170
transcript_128924.nic	chr20	+	436	3	ISM	ENSG00000198900.7	ENST00000681058.1	8092	20	-127	62820	-35	-62820	5prime_fragment	FALSE	canonical	3	200	junction_1	5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGGTGGAATCAAGCAA	41019730	True	NA	93	True	NA	NA	NA	41028786	41061490	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_41029101_41029430_41029456_41061393
transcript_12893.known	chr1	+	1955	14	FSM	ENSG00000117262.19	ENST00000460277.5	1955	14	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	57.8413459540418	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTGCCTTACGTTCATT	145604729	True	NA	NA	False	ATTAAA	-16	NA	145607989	145670463	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_145608176_145616233_145616294_145618319_145618424_145623053_145623161_145623592_145623715_145630686_145630808_145631663_145631745_145643868_145643979_145646183_145646273_145647174_145647268_145663328_145663425_145665561_145665652_145669624_145669691_145669833
transcript_128932.nic	chr20	-	720	4	ISM	ENSG00000124177.16	ENST00000373233.8	10719	37	-72	112837	-65	0	5prime_fragment	FALSE	canonical	3	40	junction_3	8.04155872120988	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAAGGAAAAAGGAAAA	-41613595	True	NA	NA	False	NA	NA	NA	41618449	41514919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_41514953_41533049_41533571_41551304_41551361_41618339
transcript_128933.known	chr20	-	599	3	FSM	ENSG00000124177.16	ENST00000482596.1	599	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	25.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAAGGAAAAAGGAAAA	-41613530	True	NA	NA	False	NA	NA	NA	41618384	41514919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_41514953_41533049_41533571_41618339
transcript_128936.known	chr20	-	10719	37	FSM	ENSG00000124177.16	ENST00000373233.8	10719	37	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_27	15.3702002444846	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTATTTGAGGAATTC	-41613523	True	NA	NA	False	AAAAAG	-12	NA	41618377	41402082	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_41405490_41412143_41412264_41413323_41413516_41415185_41415639_41416587_41416795_41417197_41417350_41420507_41422080_41423491_41423701_41425177_41425395_41426092_41426154_41437273_41437335_41439999_41440130_41445664_41445769_41447881_41447972_41450945_41451106_41451825_41452026_41452739_41452943_41454625_41454737_41455799_41455980_41457263_41457429_41473321_41473518_41483308_41483520_41484351_41484608_41487664_41487809_41488427_41488605_41489777_41490022_41491697_41491820_41493537_41493673_41493857_41493945_41497383_41497502_41498167_41498227_41499294_41499358_41512845_41512996_41514804_41514953_41533049_41533571_41551304_41551361_41618339
transcript_128940.known	chr20	+	3432	22	FSM	ENSG00000185513.17	ENST00000418998.7	3432	22	0	0	0	0	multi-exon	TRUE	canonical	2	12	junction_1	19.8286308951123	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCATAGTTGTCCTTAAGT	43507021	True	NA	2	True	AATAAA	-19	NA	43507696	43541895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_43507745_43513475_43513640_43513837_43514062_43514634_43514777_43515008_43515160_43515291_43515416_43516092_43516178_43528656_43528746_43529263_43529369_43530283_43530420_43530797_43530890_43532772_43532925_43533341_43533419_43534007_43534094_43534283_43534395_43534827_43534943_43535836_43535937_43536096_43536295_43536408_43536459_43540150_43540309_43540752_43540816_43540933
transcript_128954.known	chr20	+	1227	7	FSM	ENSG00000124193.16	ENST00000668808.1	1227	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_6	18.3121089264272	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGTTTTGAGTTTATTG	43442581	True	NA	28	True	AATAAA	-18	NA	43457892	43463605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_43458141_43458360_43458510_43459770_43459896_43460032_43460242_43460514_43460599_43460702_43460853_43463343
transcript_128957.known	chr20	+	4353	6	FSM	ENSG00000124193.16	ENST00000244020.5	4353	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	4.28952211790544	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGCACCTAGTGTAGTAA	43442584	True	NA	104	True	AATAAA	-18	NA	43457895	43464243	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_43458141_43458360_43458510_43459770_43459896_43460032_43460242_43460514_43460599_43460702
transcript_128962.known	chr20	+	1077	6	FSM	ENSG00000124193.16	ENST00000670741.1	1077	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	21.5369450015549	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGTTTTGAGTTTATTG	43442581	True	NA	28	True	AATAAA	-18	NA	43457892	43463605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_43458141_43458360_43458510_43459770_43459896_43460032_43460242_43460514_43460599_43463343
transcript_128963.known	chr20	+	2404	19	FSM	ENSG00000185513.17	ENST00000373135.8	2404	19	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_7	18.1216738114445	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATATTGTGATTTACTGC	43513512	False	NA	9	True	ATTAAA	-18	NA	43514520	43541189	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_43514777_43515008_43515160_43515291_43515416_43516092_43516178_43528656_43528746_43529263_43529369_43530283_43530420_43530797_43530890_43532772_43532925_43533341_43533419_43534007_43534094_43534283_43534395_43534827_43534943_43535836_43535937_43536096_43536295_43536408_43536459_43540150_43540309_43540752_43540816_43540933
transcript_128968.known	chr20	+	1599	14	FSM	ENSG00000101052.13	ENST00000373039.4	1599	14	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	55.9486239393791	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACAGTCTTGATTTTTT	43588389	True	NA	39	True	ATTAAA	-32	NA	43590989	43647222	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_43591030_43594692_43594818_43596434_43596523_43603759_43603890_43604182_43604259_43605001_43605074_43613849_43613977_43618939_43619027_43620856_43620926_43623890_43624046_43635925_43636014_43637144_43637254_43642478_43642625_43646935
transcript_128969.known	chr20	+	1754	14	FSM	ENSG00000101052.13	ENST00000373030.8	1754	14	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	27.9847803099128	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGTTGTAAATACTGTAC	43588336	True	NA	116	True	NA	NA	NA	43590936	43647299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_43591055_43594692_43594818_43596434_43596523_43603759_43603890_43604182_43604259_43605001_43605074_43613849_43613977_43618939_43619027_43620856_43620926_43623890_43624046_43635925_43636014_43637144_43637254_43642478_43642625_43646935
transcript_12897.known	chr1	+	2124	14	FSM	ENSG00000117262.19	ENST00000313835.14	2124	14	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	18.1346051880223	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCAGGTATGTCATTTT	145604727	True	NA	20	True	AATAGA	-16	NA	145607987	145670650	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_145608176_145616233_145616294_145618319_145618424_145623053_145623161_145623612_145623715_145630686_145630808_145631663_145631745_145643868_145643979_145646183_145646273_145647174_145647268_145663328_145663425_145665561_145665652_145669624_145669691_145669833
transcript_128991.known	chr20	+	2668	14	FSM	ENSG00000101057.16	ENST00000217026.5	2668	14	0	0	0	0	multi-exon	FALSE	canonical	3	1314	junction_2	75.1475078029477	3379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTGGTCTGGACTCTGC	43646132	True	NA	20	True	AATAAA	-15	NA	43667113	43716482	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_43667304_43673805_43673900_43681783_43681856_43682793_43682887_43686851_43687073_43692156_43692320_43699756_43700045_43702489_43702904_43705218_43705359_43709962_43710063_43711487_43711602_43713001_43713107_43715133_43715284_43715958
transcript_129.known	SIRV4	-	670	4	FSM	SIRV4A	SIRV403	670	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3561.98599410809	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGATATTTAGAGCGTA	NA	False	NA	NA	False	NA	NA	NA	15122	8322	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV4_-_8373_8629_8991_13672_13829_15019
transcript_129020.known	chr20	+	2704	13	FSM	ENSG00000101057.16	ENST00000396863.8	2704	13	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	376.912014489677	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCCTCTCTACTGGGC	43646037	True	NA	33	True	AATAAA	-28	NA	43667018	43716495	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_43667304_43673805_43673900_43682793_43682887_43686851_43687073_43692156_43692320_43699756_43700045_43702489_43702904_43705218_43705359_43709962_43710063_43711487_43711602_43713001_43713107_43715133_43715284_43715958
transcript_129054.known	chr20	+	2491	9	FSM	ENSG00000124191.18	ENST00000341197.9	2491	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	6.25999201277446	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTCTGTGTCTCCTTGCC	43914712	True	NA	NA	False	AATAAA	-20	NA	43914851	44069616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_43914991_43973366_43973433_44006546_44006793_44051305_44051546_44054298_44054527_44064776_44064858_44065711_44066108_44066729_44066858_44068649
transcript_129056.known	chr20	-	9502	6	FSM	ENSG00000149596.7	ENST00000372980.4	9502	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.28035085019828	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCAGTCTCAGGTATGT	-44187106	True	NA	NA	False	ATTAAA	-16	NA	44187188	44106589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_44113504_44114781_44114877_44115664_44116387_44118504_44118624_44159617_44160408_44186326
transcript_129058.known	chr20	-	1923	2	FSM	ENSG00000149596.7	ENST00000342272.3	1923	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTTTTTTCTTTTTCTTT	-44187011	True	NA	NA	False	ATTAAA	-20	NA	44187093	44176816	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_44177973_44186326
transcript_129059.known	chr20	-	2109	4	FSM	ENSG00000132823.11	ENST00000255174.3	2109	4	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_1	30.4667396060396	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGCTGGCTGTGGTTGAT	-44205565	True	NA	NA	False	AATACA	-20	NA	44210771	44195938	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_44197740_44202960_44203075_44206880_44206999_44210695
transcript_129065.known	chr20	+	1904	4	FSM	ENSG00000223891.7	ENST00000435163.5	1904	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	4.10960933531265	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGACTCCATCTCAAAAAAA	44210384	True	NA	-40	True	NA	NA	NA	44211036	44225972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44211357_44214887_44215004_44217366_44217683_44224820
transcript_129066.known	chr20	+	1441	3	FSM	ENSG00000223891.7	ENST00000439943.5	1441	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTCTGTTTCTATG	44210944	False	NA	15	True	AATAAA	-32	NA	44210959	44226027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44211078_44214887_44215004_44224820
transcript_129067.known	chr20	+	1627	3	FSM	ENSG00000223891.7	ENST00000655968.1	1627	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAGACTCCATCTCAAAA	44210342	True	NA	-43	True	NA	NA	NA	44210994	44225969	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44211357_44214887_44215004_44224820
transcript_129068.known	chr20	+	1366	2	FSM	ENSG00000223891.7	ENST00000671199.2	1378	2	0	12	0	-3	multi-exon	FALSE	canonical	3	13	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGTATGATTTTGTTT	44210893	False	NA	3	True	AATAAA	-20	NA	44210906	44226015	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44211078_44224820
transcript_129069.known	chr20	+	1482	2	FSM	ENSG00000223891.7	ENST00000442383.1	1482	2	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTCTGTTTCTATG	44210429	True	NA	15	True	AATAAA	-32	NA	44211081	44226027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44211357_44224820
transcript_129070.known	chr20	+	2645	6	FSM	ENSG00000124194.17	ENST00000617075.4	2645	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12.9522198869537	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTATTTTGCAATAAAAAAAA	44247087	True	NA	NA	False	ATTAAA	-40	NA	44247098	44280917	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44247203_44257152_44257346_44258433_44258608_44263229_44263328_44264444_44264560_44278956
transcript_129071.known	chr20	+	2855	6	FSM	ENSG00000124194.17	ENST00000537864.5	2855	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	12.9984614474175	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTATTTTGCAATAAAAAAAA	44246482	True	NA	NA	False	ATTAAA	-40	NA	44247257	44280917	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44247515_44257152_44257346_44258376_44258608_44263229_44263328_44264444_44264560_44278956
transcript_129072.known	chr20	+	2778	6	FSM	ENSG00000124194.17	ENST00000342560.10	2778	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	6.30555310817378	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCACATCTTTTTTCATC	44246532	True	NA	NA	False	AATAAA	-16	NA	44247307	44280947	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44247515_44257152_44257346_44258433_44258608_44263229_44263328_44264444_44264560_44278956
transcript_129074.known	chr20	+	880	5	FSM	ENSG00000124194.17	ENST00000438466.5	880	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	13.5922772190682	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGGGCTCCCTGGGTGGG	44246544	True	NA	-78	True	NA	NA	NA	44247319	44279235	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44247515_44257152_44257346_44263229_44263328_44264444_44264560_44278956
transcript_129079.known	chr20	-	4628	2	FSM	ENSG00000197296.6	ENST00000396825.4	4628	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCAGCATTTTGTGTGT	-44310559	True	NA	NA	False	ATTAAA	-25	NA	44311202	44302839	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_44307241_44310975
transcript_12908.nic	chr1	+	1775	16	NIC	ENSG00000186141.9	novel	3777	15	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	3	58	junction_3	39.7941369215784	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTGCAGTGGGATAAGT	145821816	True	NA	8	True	AATAAA	-18	NA	145824176	145842490	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_145824370_145825756_145825924_145826453_145826493_145826605_145826710_145826819_145827006_145828748_145828838_145833259_145833365_145833489_145833583_145836493_145836575_145836814_145836867_145837535_145837597_145838055_145838207_145839889_145839992_145840115_145840166_145840921_145841072_145842338
transcript_129082.known	chr20	+	6234	6	FSM	ENSG00000124120.11	ENST00000372904.7	6234	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	22.9050212835527	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGGTTCTTTTGTGATG	44475061	True	NA	30	True	AATAAA	-18	NA	44475887	44494603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44475992_44478623_44478648_44479984_44480445_44484336_44484531_44486595_44486707_44489262
transcript_129083.known	chr20	+	926	5	FSM	ENSG00000124120.11	ENST00000456317.1	926	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	21.7413776012469	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGCTGCTGCCCGAGGGCC	44475093	True	NA	NA	False	NA	NA	NA	44475919	44489453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44475992_44479984_44480445_44484336_44484429_44486595_44486707_44489262
transcript_129085.known	chr20	+	6224	5	FSM	ENSG00000124120.11	ENST00000262605.9	6224	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	11.5217186218029	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGGTTCTTTTGTGATG	44475047	True	NA	30	True	AATAAA	-18	NA	44475873	44494603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44475992_44479984_44480445_44484336_44484531_44486595_44486707_44489262
transcript_129086.nnic	chr20	+	2619	4	NIC	ENSG00000124120.11	novel	6224	5	NA	NA	-10	-716	combination_of_known_splicesites	FALSE	canonical	3	4	junction_3	21.6692306175267	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTGGTCTCT	44475037	True	NA	NA	False	NA	NA	NA	44475863	44491099	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_44475992_44479984_44480445_44484336_44484531_44489262
transcript_12909.nic	chr1	+	2337	16	NIC	ENSG00000186141.9	novel	3777	15	NA	NA	-210	260	combination_of_known_junctions	FALSE	canonical	3	58	junction_3	39.7941369215784	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATGTCTATGCCTGTTC	145823854	True	NA	11	True	NA	NA	NA	145823877	145842753	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_145824370_145825756_145825924_145826453_145826493_145826605_145826710_145826819_145827006_145828748_145828838_145833259_145833365_145833489_145833583_145836493_145836575_145836814_145836867_145837535_145837597_145838055_145838207_145839889_145839992_145840115_145840166_145840921_145841072_145842338
transcript_129092.known	chr20	-	4396	10	FSM	ENSG00000132824.14	ENST00000342374.5	4396	10	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_7	34.5728788303387	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATAACTGATATTAATTTG	-44517662	True	NA	-11	True	AATAAA	-41	NA	44522070	44497440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_44500435_44501072_44501301_44503814_44503996_44504800_44504892_44506826_44506997_44509890_44510029_44511288_44511369_44512800_44512995_44513878_44514041_44521912
transcript_129106.known	chr20	-	1496	12	FSM	ENSG00000196839.13	ENST00000372874.9	1496	12	0	0	0	0	multi-exon	TRUE	canonical	3	227	junction_3	22.6208417027051	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGTGGCATGTAATTTGG	-44649818	True	NA	-5	True	AATAAA	-25	NA	44651699	44619521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_44619848_44620298_44620402_44621017_44621148_44622587_44622653_44622828_44622931_44623006_44623079_44624201_44624330_44625568_44625685_44626455_44626600_44629046_44629170_44636226_44636289_44651574
transcript_129107.known	chr20	-	1128	11	FSM	ENSG00000196839.13	ENST00000537820.1	1128	11	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	77.1748663750058	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTGGAGTCACCCCAAC	-44649810	True	NA	NA	False	NA	NA	NA	44651691	44619809	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_44619848_44620298_44620402_44621017_44621148_44622587_44622653_44622828_44622931_44624201_44624330_44625568_44625685_44626455_44626600_44629046_44629170_44636226_44636289_44651574
transcript_129108.known	chr20	-	1276	11	FSM	ENSG00000196839.13	ENST00000492931.5	1276	11	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_3	23.7200337267888	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTGGAGTCACCCCAAC	-44649810	True	NA	NA	False	NA	NA	NA	44651691	44619809	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_44619848_44620298_44620402_44621017_44621148_44622587_44622653_44622828_44623079_44624201_44624330_44625568_44625685_44626455_44626600_44629046_44629170_44636226_44636289_44651574
transcript_129115.known	chr20	+	1443	6	FSM	ENSG00000168734.14	ENST00000372891.7	1443	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	183.597821337836	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTAAGATTATTTCTC	NA	False	NA	19	True	AATAAA	-19	NA	44531784	44619037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44531979_44582584_44582732_44585099_44585205_44589796_44589867_44614533_44614708_44618284
transcript_129116.known	chr20	+	1338	5	FSM	ENSG00000168734.14	ENST00000372892.7	1338	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	159.058754867502	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTAAGATTATTTCTC	NA	False	NA	19	True	AATAAA	-19	NA	44531784	44619037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44531979_44582584_44582732_44589796_44589867_44614533_44614708_44618284
transcript_129120.known	chr20	+	1191	4	FSM	ENSG00000168734.14	ENST00000372894.7	1191	4	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	67.2755527662166	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTAAGATTATTTCTC	NA	False	NA	19	True	AATAAA	-19	NA	44531784	44619037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44531979_44589796_44589867_44614533_44614708_44618284
transcript_129122.nic	chr20	+	3604	3	ISM	ENSG00000168734.14	ENST00000372894.7	1191	4	42	1122	42	-1122	5prime_fragment	FALSE	canonical	3	255	junction_1	79.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAACAGCTGCCATTTGCT	44528195	True	NA	NA	False	ATTAAA	-16	NA	44531826	44617915	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_44531979_44589796_44589867_44614533
transcript_129126.known	chr20	+	2514	2	FSM	ENSG00000124249.7	ENST00000372861.5	2514	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGACGCAACAGCTGTGCC	44745817	True	NA	NA	False	AATAAA	-19	NA	44745864	44752313	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44746194_44750128
transcript_129128.known	chr20	+	1097	7	FSM	ENSG00000166913.13	ENST00000479421.5	1097	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	1129.9498022282	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAGAATCGTACGT	44857665	True	NA	34	True	GATAAA	-14	NA	44885701	44906520	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44885887_44901530_44901834_44903035_44903122_44903992_44904117_44904967_44905132_44906000_44906097_44906381
transcript_129129.known	chr20	+	3109	7	FSM	ENSG00000166913.13	ENST00000372839.7	3109	7	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_1	1027.44034701128	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGTGTCACCACCATCT	44857674	True	NA	30	True	AATAAA	-27	NA	44885710	44908532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44885887_44887647_44887743_44901530_44901834_44903992_44904117_44904967_44905132_44906000_44906097_44906381
transcript_129131.known	chr20	+	3020	6	FSM	ENSG00000166913.13	ENST00000353703.9	3020	6	0	0	0	0	multi-exon	FALSE	canonical	3	2080	junction_1	206.28233079932	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGTGTCACCACCATCT	44857668	True	NA	30	True	AATAAA	-27	NA	44885704	44908532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44885887_44901530_44901834_44903992_44904117_44904967_44905132_44906000_44906097_44906381
transcript_12914.known	chr1	+	3777	15	FSM	ENSG00000186141.9	ENST00000334163.4	3777	15	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_1	12.7359366217272	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCATGTTCTGTCTCAC	145821839	True	NA	NA	False	AATAAA	-18	NA	145824199	145844402	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_145824370_145825756_145825924_145826453_145826710_145826819_145827006_145828748_145828838_145833259_145833365_145833489_145833583_145836493_145836575_145836814_145836867_145837535_145837597_145838055_145838207_145839889_145839992_145840115_145840166_145840921_145841072_145842338
transcript_129151.known	chr20	+	2126	15	FSM	ENSG00000101104.13	ENST00000255136.8	2126	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_9	29.8157607958733	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCCTCCCAGGAGGCCC	44907059	True	NA	14	True	ATTAAA	-17	NA	44910059	44939316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44910337_44912659_44912854_44916755_44916872_44918905_44919046_44919182_44919278_44921593_44921732_44924160_44924257_44930459_44930727_44932341_44932433_44933071_44933186_44935390_44935498_44936636_44936731_44938060_44938192_44938673_44938749_44939125
transcript_129158.nnic	chr20	+	2090	15	NNC	ENSG00000101104.13	novel	1910	14	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	30.1889458076891	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTTGCCTCCCAGGAGG	44907031	True	NA	11	True	ATTAAA	-14	NA	44910031	44939313	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_44910337_44912659_44912854_44916755_44916872_44918905_44919046_44919182_44919278_44921593_44921732_44924160_44924257_44930517_44930727_44931953_44932027_44933056_44933186_44935390_44935498_44936636_44936731_44938060_44938192_44938673_44938749_44939125
transcript_129160.nic	chr20	+	2108	15	NIC	ENSG00000101104.13	novel	2141	15	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_9	23.1028092646407	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTTGCCTCCCAGGAGG	44907031	True	NA	11	True	ATTAAA	-14	NA	44910031	44939313	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_44910337_44912659_44912854_44916755_44916872_44918905_44919046_44919182_44919278_44921593_44921732_44924160_44924257_44930517_44930727_44932341_44932433_44933056_44933186_44935390_44935498_44936636_44936731_44938060_44938192_44938673_44938749_44939125
transcript_129176.known	chr20	+	1910	14	FSM	ENSG00000101104.13	ENST00000537323.5	1910	14	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	25.0523711806916	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTTGCCTCCCAGGAGG	44907123	True	NA	11	True	ATTAAA	-14	NA	44910123	44939313	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44910337_44912659_44912854_44916755_44916872_44918905_44919046_44919182_44919278_44921593_44921732_44924160_44924257_44930517_44930727_44933071_44933186_44935390_44935498_44936636_44936731_44938060_44938192_44938673_44938749_44939125
transcript_129193.nic	chr20	+	2058	7	ISM	ENSG00000101104.13	ENST00000255136.8	2126	15	-28	14086	-28	-11957	5prime_fragment	FALSE	canonical	3	65	junction_3	5.08811250749125	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCCCAGATGGTTTTTAAG	44907031	True	NA	NA	False	NA	NA	NA	44910031	44925230	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_44910337_44912659_44912854_44916755_44916872_44918905_44919046_44919182_44919278_44921593_44921732_44924160
transcript_129194.known	chr20	-	1973	7	FSM	ENSG00000025772.8	ENST00000372813.4	1973	7	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_3	27.3231688417642	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTTGTTGAACAAATTT	-44957400	True	NA	-3	True	AATAAA	-24	NA	44960397	44942129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_44943214_44943452_44943580_44948729_44948878_44951832_44952003_44955067_44955221_44956385_44956486_44960206
transcript_129195.nnic	chr20	-	1804	6	NIC	ENSG00000025772.8	novel	1973	7	NA	NA	-66	-87	combination_of_known_splicesites	FALSE	canonical	3	25	junction_2	165.73545185023	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGCTGTGCTTTCATTT	-44957466	True	NA	-1	True	ATTAAA	-20	NA	44960463	44942216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_44943214_44943452_44943580_44951832_44952003_44955067_44955221_44956385_44956486_44960206
transcript_1292.nic	chr1	-	2095	12	NIC	ENSG00000008130.15	novel	3235	12	NA	NA	-116	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	162.740070598831	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTAAAACTTCTGCAGGG	-1779995	False	NA	39	True	NA	NA	NA	1780185	1752470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_1753061_1753566_1753650_1754050_1754209_1754283_1754384_1754543_1754699_1755373_1755477_1756257_1756344_1756502_1756609_1757180_1757311_1761951_1762036_1765227_1765447_1779904
transcript_129201.known	chr20	-	2065	3	FSM	ENSG00000227477.1	ENST00000434401.1	2065	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACCTCTTCCCAGAAGAC	-44966387	True	NA	NA	False	AATAAA	-18	NA	44966402	44963793	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_44965449_44965561_44965686_44966116
transcript_129204.known	chr20	+	6366	11	FSM	ENSG00000101109.12	ENST00000372806.8	6366	11	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_8	15.1937487145207	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGGTGTGTTTATTCT	44961882	True	NA	58	True	AATATA	-43	NA	44966511	45080021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44966604_44972077_44972159_44978442_44978572_44981828_44981944_44987131_44987297_44995089_44995258_44997168_44997307_45000391_45000521_45001166_45001354_45024972_45025131_45075017
transcript_129206.nic	chr20	+	1333	10	ISM	ENSG00000101109.12	ENST00000372801.5	2038	12	-75	50572	-32	29779	5prime_fragment	FALSE	canonical	3	106	junction_8	15.734682930189	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAACCAGATCAACAGCT	44961817	True	NA	NA	False	AAAAAG	-5	NA	44966446	45025036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_44966604_44972077_44972159_44978442_44978572_44981828_44981944_44987131_44987297_44995089_44995258_44997168_44997307_45000391_45000521_45001166_45001354_45024972
transcript_129211.known	chr20	+	932	2	FSM	ENSG00000101109.12	ENST00000488618.1	932	2	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTCCTACCTCTCTCTG	44961885	True	NA	NA	False	AATAAA	-13	NA	44966514	44972920	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_44966604_44972077
transcript_129212.known	chr20	-	5447	4	FSM	ENSG00000124134.9	ENST00000537075.3	5447	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2.35702260395516	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGGCAAAAGTTATTGAT	-45101078	True	NA	NA	False	AATAAA	-23	NA	45101127	45091213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_45095341_45097661_45098696_45099160_45099240_45100920
transcript_129213.known	chr20	+	1622	3	FSM	ENSG00000124233.12	ENST00000372781.4	1622	3	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	1.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTTTGACTCCTGTTT	45206649	True	NA	6	True	AATAAA	-20	NA	45207032	45209768	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45207130_45207373_45208731_45209600
transcript_129223.nnic	chr20	-	2604	5	NNC	ENSG00000124145.6	novel	2613	5	NA	NA	5811	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_4	72.060738269879	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTGCCTCTGTCATTTT	-45342597	False	2816	-4	True	AATAAA	-18	NA	45342613	45325287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_45327416_45330365_45330565_45333022_45333070_45335781_45335921_45342522
transcript_129224.known	chr20	-	2613	5	FSM	ENSG00000124145.6	ENST00000372733.3	2613	5	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_2	5.1720402163943	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTGCCTCTGTCATTTT	-45345608	True	NA	-4	True	AATAAA	-18	NA	45348424	45325287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_45327416_45330365_45330565_45333022_45333070_45335781_45335921_45348324
transcript_129225.nnic	chr20	-	2522	4	NIC	ENSG00000124145.6	novel	2613	5	NA	NA	-48	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	79.3011139055856	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTGCCTCTGTCATTTT	-45345656	True	NA	-4	True	AATAAA	-18	NA	45348472	45325287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_45327416_45330365_45330565_45333022_45333070_45348324
transcript_129227.known	chr20	+	1313	6	FSM	ENSG00000254806.5	ENST00000419593.5	1313	6	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_3	164.440141084834	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGACTTCATTTTTCATAT	45361078	True	NA	NA	False	AATAAA	-22	NA	45363199	45410610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45363316_45363528_45363694_45365618_45365687_45408459_45408607_45408800_45408939_45409931
transcript_129230.known	chr20	+	941	4	FSM	ENSG00000204070.10	ENST00000457307.1	941	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	44.0782133132559	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAGAGAGAAAAAAAATCA	45361108	True	NA	-22	True	NA	NA	NA	45363229	45367424	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45363316_45363528_45363694_45365546_45365687_45366874
transcript_129231.known	chr20	+	2728	4	FSM	ENSG00000204070.10	ENST00000243918.10	2728	4	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_3	10.1434160364686	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTCCAGCAGTGTGGG	45361034	True	NA	17	True	AATAAA	-22	NA	45363155	45369209	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45363316_45363528_45363694_45365618_45365687_45366874
transcript_129233.known	chr20	+	2915	4	FSM	ENSG00000204070.10	ENST00000426004.5	2915	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	50.0022221728417	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAGCCTCAGCAAGATTAA	45361017	True	NA	NA	False	AATAAA	-25	NA	45363138	45376798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45363316_45363528_45363694_45365618_45365687_45374293
transcript_129236.nnic	chr20	+	1277	4	NNC	ENSG00000244274.9	novel	1132	3	NA	NA	-351	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	183.561675980824	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCGACTTCATTTTTCA	45405682	True	NA	NA	False	AATAAA	-19	NA	45405705	45410607	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_45406022_45408459_45408607_45408800_45408939_45409931
transcript_129238.known	chr20	+	1118	4	FSM	ENSG00000244274.9	ENST00000372723.7	1118	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	171.821612920688	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGACTTCATTTTTCATAT	45405552	False	NA	NA	False	AATAAA	-22	NA	45406056	45410610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45406211_45408459_45408607_45408800_45408939_45409931
transcript_129239.known	chr20	+	1202	4	FSM	ENSG00000244274.9	ENST00000372722.7	1202	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	180.787782281387	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGACTTCATTTTTCATAT	45405566	False	NA	NA	False	AATAAA	-22	NA	45406070	45410610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45406211_45408459_45408607_45408800_45409037_45409931
transcript_129241.known	chr20	+	1078	4	FSM	ENSG00000244274.9	ENST00000360981.8	1078	4	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_1	33.5062183283442	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGACTTCATTTTTCATAT	45403258	True	NA	NA	False	AATAAA	-22	NA	45406618	45410610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45406733_45408459_45408607_45408800_45408939_45409931
transcript_129242.known	chr20	+	1207	4	FSM	ENSG00000244274.9	ENST00000372717.5	1207	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	165.582473576027	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGACTTCATTTTTCATAT	45403227	True	NA	NA	False	AATAAA	-22	NA	45406587	45410610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45406733_45408459_45408607_45408800_45409037_45409931
transcript_129243.known	chr20	+	1537	4	FSM	ENSG00000244274.9	ENST00000372712.6	1537	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	180.743526086613	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGACTTCATTTTTCATAT	45407192	False	NA	NA	False	AATAAA	-22	NA	45407206	45410610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45407780_45408459_45408607_45408800_45408939_45409931
transcript_129245.known	chr20	+	1036	4	FSM	ENSG00000244274.9	ENST00000357275.6	1036	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	182.622257375406	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGACTTCATTTTTCATAT	45405961	False	NA	NA	False	AATAAA	-22	NA	45406183	45410610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45406256_45408459_45408607_45408800_45408939_45409931
transcript_129253.known	chr20	+	2311	13	FSM	ENSG00000124155.19	ENST00000638612.1	2311	13	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_12	199.743098893443	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTGGGTGACAGGGAAG	45408048	True	NA	NA	False	NA	NA	NA	45416122	45430149	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45416344_45416516_45416695_45418851_45418980_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45427421_45427546_45429480
transcript_129255.known	chr20	+	2088	12	FSM	ENSG00000124155.19	ENST00000638445.1	2088	12	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	157.489655963613	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTTTACTGTTTGTGGAA	45408066	True	NA	-25	True	NA	NA	NA	45416140	45426201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45416344_45416516_45416655_45418851_45418980_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_129257.known	chr20	+	2203	12	FSM	ENSG00000124155.19	ENST00000640585.1	2203	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	157.773139781027	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGGAGTTTACTGTTTG	45408066	True	NA	-30	True	NA	NA	NA	45416140	45426196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45416344_45416516_45416695_45418771_45418980_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_129258.known	chr20	+	2158	12	FSM	ENSG00000124155.19	ENST00000639932.1	2158	12	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	154.126759036968	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTTTACTGTTTGTGGA	45408066	True	NA	-26	True	NA	NA	NA	45416140	45426200	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45416344_45416516_45416695_45418851_45418980_45419294_45419396_45419472_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_129259.known	chr20	+	2187	12	FSM	ENSG00000124155.19	ENST00000640986.1	2187	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	155.893585234786	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCTTTGCCTCTTGTCCT	45408066	True	NA	14	True	AATAAA	-16	NA	45416140	45426240	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45416344_45416516_45416695_45418851_45418980_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420507_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_129261.known	chr20	+	2112	12	FSM	ENSG00000124155.19	ENST00000640272.1	2112	12	0	0	0	0	multi-exon	FALSE	canonical	1	17	junction_4	152.711903988637	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTAGTGGATGGAGTTTA	45408066	True	NA	-37	True	NA	NA	NA	45416140	45426189	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45416344_45416516_45416695_45418851_45418980_45419294_45419396_45419507_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_129275.known	chr20	+	2037	11	FSM	ENSG00000124155.19	ENST00000543458.7	2037	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	164.178439510187	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCCTCTTGTCCTTGAG	45408032	True	NA	18	True	AATAAA	-20	NA	45416106	45426244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45416344_45416516_45416655_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_129276.known	chr20	+	2021	11	FSM	ENSG00000124155.19	ENST00000639499.1	2021	11	0	0	0	0	multi-exon	FALSE	canonical	3	489	junction_9	26.5716013819265	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCGTCTCTCTTTCTTTCCT	45408066	True	NA	NA	False	NA	NA	NA	45416140	45425100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45416344_45416516_45416695_45418851_45418980_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495
transcript_129278.known	chr20	+	1971	11	FSM	ENSG00000124155.19	ENST00000372689.9	1971	11	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_8	156.151336849865	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTTTGCCTCTTGTCCTT	45408062	True	NA	15	True	AATAAA	-17	NA	45416136	45426241	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45416344_45416516_45416695_45418851_45418980_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45424215_45424382_45424495_45424580_45425573
transcript_129280.known	chr20	+	1691	11	FSM	ENSG00000124155.19	ENST00000639783.1	1691	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	164.053527849906	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGGGGAGCCCAAGGGCT	45408068	True	NA	NA	False	NA	NA	NA	45416142	45425867	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45416344_45416516_45416695_45418851_45418980_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_129283.known	chr20	+	1807	11	FSM	ENSG00000124155.19	ENST00000455050.2	1807	11	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	213.927113756064	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACGAGCCAAATGTGGC	45408066	True	NA	NA	False	NA	NA	NA	45416140	45425977	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45416344_45416516_45416695_45419294_45419396_45419472_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_129285.known	chr20	+	2032	11	FSM	ENSG00000124155.19	ENST00000638246.1	2032	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	161.811742466361	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTAGTGGATGGAGTTTA	45408022	True	NA	-37	True	NA	NA	NA	45416096	45426189	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45416344_45416516_45416695_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_129289.known	chr20	+	1944	11	FSM	ENSG00000124155.19	ENST00000638671.1	1944	11	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	163.872023237647	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGATGGAGTTTACTGTTT	45408066	True	NA	-31	True	NA	NA	NA	45416140	45426195	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45416344_45418851_45418980_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_129292.known	chr20	+	1810	10	FSM	ENSG00000124155.19	ENST00000640194.1	1810	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	251.957668402187	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTACTGTTTGTGGAAT	45408076	True	NA	-24	True	NA	NA	NA	45416150	45426202	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45416344_45416516_45416695_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420507_45420694_45424215_45424382_45424495_45424580_45425573
transcript_129295.known	chr20	+	1880	10	FSM	ENSG00000124155.19	ENST00000279035.14	1880	10	0	0	0	0	multi-exon	TRUE	canonical	3	33	junction_1	165.121803153137	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTACTGTTTGTGGAAT	45416069	False	NA	-24	True	NA	NA	NA	45416083	45426202	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45416344_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_129305.known	chr20	+	1429	9	FSM	ENSG00000124155.19	ENST00000640175.1	1429	9	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	182.228865372641	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTGGCTTTTGAACCAA	45408066	True	NA	NA	False	NA	NA	NA	45416140	45425909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45416344_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_129306.known	chr20	+	1715	9	FSM	ENSG00000124155.19	ENST00000640210.1	1715	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	183.537419549802	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTACTGTTTGTGGAAT	45408069	True	NA	-24	True	NA	NA	NA	45416143	45426202	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45416344_45419507_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_129307.known	chr20	+	692	5	FSM	ENSG00000101443.18	ENST00000447118.5	692	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	159.717524085493	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTTCTGTCTCTGTCTCCC	45464763	False	NA	16	True	AATAAA	-16	NA	45469755	45481531	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45469861_45470388_45470533_45471152_45471282_45479941_45480095_45481370
transcript_129308.known	chr20	+	567	4	FSM	ENSG00000101443.18	ENST00000372676.8	567	4	0	0	0	0	multi-exon	TRUE	canonical	3	260	junction_1	58.2885542414251	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTCTGTCTCTGTCTCCCC	45464760	True	NA	17	True	AATAAA	-17	NA	45469752	45481532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45469861_45470388_45470533_45479941_45480095_45481370
transcript_12931.known	chr1	-	9135	9	FSM	ENSG00000265491.5	ENST00000582693.5	9135	9	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	6.48074069840786	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGTTCTCATTTTGTT	-145824081	False	NA	3	True	AATAAA	-18	NA	145824095	145738867	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_145746998_145747994_145748111_145750406_145750501_145751437_145751511_145752977_145753050_145771710_145771920_145784538_145784597_145788907_145788967_145823771
transcript_129311.known	chr20	+	460	3	FSM	ENSG00000101443.18	ENST00000462062.5	460	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	183.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTCTGTCTCTGTCTCCCC	45471254	False	NA	17	True	AATAAA	-17	NA	45471272	45481532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45471418_45479941_45480095_45481370
transcript_129312.known	chr20	+	420	3	FSM	ENSG00000101443.18	ENST00000339946.7	420	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	193.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTCTGTCTCTGTCTCCCC	45464763	False	NA	17	True	AATAAA	-17	NA	45469755	45481532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45469861_45479941_45480095_45481370
transcript_129315.nnic	chr20	+	551	3	Antisense	novelGene_ENSG00000124116.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	7.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCATCAGCACCACCTGG	45759504	True	NA	NA	False	TTTAAA	-14	NA	45759646	45765276	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr20_+_45759900_45762148_45762328_45765157
transcript_129319.known	chr20	+	1264	13	FSM	ENSG00000101457.13	ENST00000372622.8	1264	13	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_6	33.3687312048604	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTGAACCTGCTGTGCC	45788207	True	NA	12	True	ATTAAA	-19	NA	45791953	45811418	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45792110_45792676_45792748_45793920_45794018_45795344_45795444_45801073_45801143_45801401_45801459_45801998_45802058_45803332_45803379_45805145_45805205_45805305_45805367_45809113_45809186_45810884_45810941_45811056
transcript_129322.known	chr20	+	1073	12	FSM	ENSG00000101457.13	ENST00000456939.5	1073	12	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	108.144760650705	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGTGCCCTCTACCTT	45788308	True	NA	21	True	ATTAAA	-28	NA	45792054	45811427	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45792110_45792676_45792748_45793920_45794018_45801073_45801143_45801401_45801459_45801998_45802058_45803332_45803379_45805145_45805205_45805305_45805367_45809113_45809186_45810884_45810941_45811056
transcript_129326.known	chr20	+	737	6	FSM	ENSG00000175063.17	ENST00000335046.7	737	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	1693.06933112617	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGCGTTGTAATTTCA	45746809	True	NA	38	True	AATAAA	-26	NA	45812634	45816957	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45812797_45813436_45813465_45814383_45814471_45815389_45815541_45815853_45815914_45816708
transcript_129329.known	chr20	+	777	6	FSM	ENSG00000175063.17	ENST00000356455.9	777	6	0	0	0	0	multi-exon	FALSE	canonical	3	3264	junction_1	158.182679203508	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAAGTTGTTGCGTTGTAA	45746818	True	NA	33	True	AATAAA	-21	NA	45812643	45816952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45812797_45813436_45813465_45814383_45814471_45815540_45815746_45815853_45815914_45816708
transcript_129330.known	chr20	+	914	6	FSM	ENSG00000175063.17	ENST00000372568.4	914	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	1403.71370300357	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGCGTTGTAATTTCA	45812878	True	NA	38	True	AATAAA	-26	NA	45813005	45816957	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45813291_45813436_45813465_45814383_45814471_45815540_45815746_45815853_45815914_45816708
transcript_129332.known	chr20	+	641	5	FSM	ENSG00000175063.17	ENST00000405520.5	641	5	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_3	1493.19238546143	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTTGTTGCGTTGTAAT	45812543	False	NA	34	True	AATAAA	-22	NA	45812575	45816953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45812797_45813436_45813465_45814383_45814471_45815853_45815914_45816708
transcript_129334.known	chr20	+	665	5	FSM	ENSG00000175063.17	ENST00000352551.9	665	5	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	1467.7753574713	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGCGTTGTAATTTCA	45746848	True	NA	38	True	AATAAA	-26	NA	45812673	45816957	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45812797_45813436_45813465_45815540_45815746_45815853_45815914_45816708
transcript_129337.known	chr20	+	476	4	FSM	ENSG00000175063.17	ENST00000243893.10	476	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	1651.48424825132	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGCGTTGTAATTTCA	45746832	True	NA	38	True	AATAAA	-26	NA	45812657	45816957	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45812797_45813436_45813465_45815853_45815914_45816708
transcript_129343.nic	chr20	-	551	2	ISM	ENSG00000101470.10	ENST00000372555.8	681	6	2937	0	2937	0	intron_retention	FALSE	canonical	3	180	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGGCCTGAATGAGGGG	-45824260	True	NA	-1	True	AATAAA	-17	NA	45824375	45823213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_45823380_45823990
transcript_129344.known	chr20	-	681	6	FSM	ENSG00000101470.10	ENST00000372555.8	681	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	67.4091981854109	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGGCCTGAATGAGGGG	-45827242	True	NA	-1	True	AATAAA	-17	NA	45827312	45823213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_45823380_45823990_45824128_45824291_45824407_45824494_45824639_45824782_45824835_45827245
transcript_129345.known	chr20	-	1154	6	FSM	ENSG00000101473.17	ENST00000217455.9	1154	6	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_2	29.7684396635094	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTGGCTTTTAATTCCC	-45850146	True	NA	-1	True	AATAAA	-19	NA	45857392	45841720	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_45841957_45843526_45843722_45844262_45844421_45848449_45848676_45855158_45855293_45857187
transcript_129347.known	chr20	-	1197	6	FSM	ENSG00000101473.17	ENST00000461272.5	1197	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	145.099414195923	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTGGCTGGCTTTTAA	-45850143	True	NA	-6	True	AATAAA	-14	NA	45857389	45841725	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_45841957_45843526_45843773_45844262_45844421_45848449_45848676_45855158_45855293_45857187
transcript_129350.known	chr20	+	1043	5	FSM	ENSG00000124104.19	ENST00000462307.5	1043	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	23.2486558751253	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGAGCCTCCACCCTTTG	45833086	True	NA	NA	False	NA	NA	NA	45833830	45841134	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45833941_45834200_45834469_45834958_45835117_45840447_45840459_45840638
transcript_129351.known	chr20	-	1013	5	FSM	ENSG00000101473.17	ENST00000488679.5	1013	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	139.811256699881	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTGATACCACTGGAGTG	-45850156	True	NA	-18	True	AATAAA	-2	NA	45857402	45841737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_45841957_45843526_45843722_45844262_45844421_45848449_45848676_45857187
transcript_129354.nic	chr20	-	958	5	NIC	ENSG00000101473.17	novel	1154	6	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	156.020030765283	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTTGGCCCTCACATCC	-45850189	True	NA	-45	True	NA	NA	NA	45857435	45841764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_45841957_45844262_45844421_45848449_45848676_45855158_45855293_45857187
transcript_129355.known	chr20	+	3206	4	FSM	ENSG00000124104.19	ENST00000491381.6	3206	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	11.8415464455544	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGACTAGAACTGGGTC	45833054	True	NA	NA	False	AATACA	-17	NA	45833798	45843276	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45833941_45834200_45834469_45834958_45835117_45840638
transcript_129356.known	chr20	+	771	4	FSM	ENSG00000124104.19	ENST00000372541.1	771	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	24.9131825880731	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCTGCCGGAGCTGCGGC	45832986	True	NA	NA	False	NA	NA	NA	45834135	45840907	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45834469_45834958_45835117_45840447_45840459_45840638
transcript_129359.known	chr20	-	1268	4	FSM	ENSG00000101473.17	ENST00000484783.1	1268	4	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_2	29.8477618740315	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCGAGGGCGACATGAAGAT	-45850151	True	NA	NA	False	NA	NA	NA	45857397	45843722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_45844421_45848449_45848676_45855158_45855293_45857187
transcript_129362.known	chr20	+	3106	3	FSM	ENSG00000124104.19	ENST00000344780.4	3106	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	13	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGGACTAGAACTGGGT	45833001	True	NA	NA	False	AATACA	-16	NA	45834150	45843275	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45834469_45834958_45835110_45840638
transcript_129363.known	chr20	-	708	3	FSM	ENSG00000101473.17	ENST00000457981.5	708	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	201	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTTGTGTGCATTATCT	-45849950	False	NA	-1	True	ATTAAA	-18	NA	45857196	45853419	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_45853985_45855158_45855293_45857187
transcript_129364.known	chr20	-	814	3	FSM	ENSG00000101473.17	ENST00000426915.1	814	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	203.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATAGTTGTGTGCATTAT	-45850063	False	NA	-3	True	ATTAAA	-16	NA	45857309	45853421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_45853980_45855158_45855293_45857187
transcript_129366.known	chr20	+	2776	2	FSM	ENSG00000132801.7	ENST00000255152.3	2776	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGGAAATGTGTTCTGCT	45857015	True	NA	NA	False	AATAAA	-7	NA	45857613	45879122	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45857981_45876713
transcript_129369.nnic	chr20	+	2203	3	NNC	ENSG00000168612.5	novel	2769	2	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8	21	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTGTCTAGTTTTTTTT	45880286	True	NA	29	True	AATAAA	-21	NA	45881204	45885266	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_45881262_45882532_45884399_45884986
transcript_129375.known	chr20	+	2774	16	FSM	ENSG00000064601.21	ENST00000677394.1	2774	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	75.9898823674719	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGGGTACAGCTTCAAAT	45890190	True	NA	2	True	NA	NA	NA	45890298	45898801	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45891072_45891172_45891380_45891568_45891763_45891915_45892028_45892272_45892324_45892397_45892485_45892724_45892881_45893219_45893312_45893987_45894073_45894649_45894742_45894822_45894902_45894993_45895134_45896964_45897041_45897716_45897807_45898004_45898110_45898366
transcript_129377.known	chr20	-	1889	16	FSM	ENSG00000100979.15	ENST00000372431.8	1889	16	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_12	44.9287831524019	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTCTATGGGAGACCCT	-45898183	True	NA	-15	True	AATAAA	-18	NA	45912155	45898621	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_45899064_45899461_45899539_45899621_45899686_45899835_45899879_45902266_45902335_45902439_45902605_45904799_45904860_45904941_45905119_45906267_45906360_45907691_45907756_45907840_45907905_45909515_45909672_45909941_45910071_45911151_45911252_45911352_45911464_45912078
transcript_129379.known	chr20	+	1898	15	FSM	ENSG00000064601.21	ENST00000191018.9	1898	15	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	74.957300770342	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTCTTCTCTGTGGCAC	45888840	True	NA	21	True	ATTAAA	-18	NA	45891340	45898820	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45891426_45891568_45891763_45891915_45892028_45892272_45892324_45892397_45892485_45892724_45892881_45893219_45893312_45893987_45894073_45894649_45894742_45894822_45894902_45894993_45895134_45896964_45897041_45897716_45897807_45898004_45898110_45898366
transcript_129381.known	chr20	-	1731	15	FSM	ENSG00000100979.15	ENST00000354050.8	1731	15	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_11	124.006768248465	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTATGGGAGACCCTG	-45898180	True	NA	-14	True	AATAAA	-19	NA	45912152	45898620	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_45899064_45899461_45899539_45899621_45899686_45899835_45899879_45902266_45902335_45902439_45902605_45904799_45904860_45904941_45905119_45906267_45906360_45907691_45907756_45907840_45907905_45909941_45910071_45911151_45911252_45911352_45911464_45912078
transcript_129382.known	chr20	+	2309	14	FSM	ENSG00000064601.21	ENST00000493522.8	2309	14	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	77.2470102445135	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGGACGGTGTGGGGG	45888897	True	NA	NA	False	NA	NA	NA	45891397	45898949	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45891426_45891568_45891763_45891915_45892028_45892272_45892324_45892397_45892485_45892724_45893312_45893987_45894073_45894649_45894742_45894822_45894902_45894993_45895134_45896964_45897041_45897716_45897807_45898004_45898110_45898366
transcript_129383.known	chr20	-	1530	14	FSM	ENSG00000100979.15	ENST00000372420.5	1530	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	131.681164158291	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTGGGCTGTCCTGAG	-45910917	False	NA	-18	True	NA	NA	NA	45910937	45898759	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_45899064_45899461_45899539_45899621_45899686_45899835_45899879_45902266_45902335_45902439_45902605_45904799_45904860_45904941_45905119_45906267_45906360_45907691_45907756_45907840_45907905_45909515_45909672_45909941_45910071_45910870
transcript_129384.known	chr20	-	1420	14	FSM	ENSG00000100979.15	ENST00000420868.2	1420	14	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_11	127.896962966658	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTAATTCCATAATCAAT	-45898183	True	NA	-64	True	NA	NA	NA	45912155	45898805	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_45899064_45899461_45899539_45899621_45899686_45899835_45899879_45902266_45902335_45902439_45902605_45904799_45904860_45904941_45905119_45906267_45906360_45907691_45907756_45907840_45907905_45911151_45911252_45911352_45911464_45912078
transcript_129386.known	chr20	-	1199	2	FSM	ENSG00000124257.7	ENST00000372518.5	1199	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGGAAGGTCTCCTTGC	-45890926	True	NA	-24	True	AATAAA	-22	NA	45891208	45888633	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_45888874_45890249
transcript_129388.known	chr20	+	1858	15	FSM	ENSG00000064601.21	ENST00000646241.3	1858	15	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_1	24.5985108226876	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTCTTCTCTGTGGCAC	45888834	True	NA	21	True	ATTAAA	-18	NA	45891334	45898820	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45891380_45891568_45891763_45891915_45892028_45892272_45892324_45892397_45892485_45892724_45892881_45893219_45893312_45893987_45894073_45894649_45894742_45894822_45894902_45894993_45895134_45896964_45897041_45897716_45897807_45898004_45898110_45898366
transcript_129389.known	chr20	+	1820	14	FSM	ENSG00000064601.21	ENST00000354880.9	1820	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	78.0527814135443	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTCTTCTCTGTGGCAC	45888821	True	NA	21	True	ATTAAA	-18	NA	45891321	45898820	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45891380_45891568_45891763_45891915_45892028_45892397_45892485_45892724_45892881_45893219_45893312_45893987_45894073_45894649_45894742_45894822_45894902_45894993_45895134_45896964_45897041_45897716_45897807_45898004_45898110_45898366
transcript_129390.known	chr20	+	1996	14	FSM	ENSG00000064601.21	ENST00000372459.7	1996	14	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_10	21.013379789494	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTCTTCTCTGTGGCAC	45888885	True	NA	21	True	ATTAAA	-18	NA	45891385	45898820	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45891763_45891915_45892028_45892272_45892324_45892397_45892485_45892724_45892881_45893219_45893312_45893987_45894073_45894649_45894742_45894822_45894902_45894993_45895134_45896964_45897041_45897716_45897807_45898004_45898110_45898366
transcript_129391.known	chr20	-	2255	15	FSM	ENSG00000100979.15	ENST00000477313.5	2255	15	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_12	45.1880424855234	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCCTGTGGGCTGTCCT	-45898075	True	NA	-21	True	NA	NA	NA	45912047	45898762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_45899064_45899461_45899539_45899621_45899686_45899835_45899879_45902266_45902335_45902439_45902605_45904799_45904860_45904941_45905119_45906267_45906360_45907691_45907756_45907840_45907905_45909515_45909672_45909941_45910071_45911151_45911252_45911352
transcript_129392.nnic	chr20	+	2827	18	NNC	ENSG00000100982.12	novel	2689	17	NA	NA	-62	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_11	117.631528386688	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGTGAGGGTCTTGAG	45934599	True	NA	9	True	AATACA	-14	NA	45934620	45948020	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_45934805_45937417_45937586_45938980_45939124_45939214_45939340_45940474_45940613_45940808_45940940_45941052_45941208_45943096_45943245_45943339_45943424_45943665_45943766_45944244_45944321_45944867_45945031_45945710_45945884_45946028_45946116_45946199_45946385_45947072_45947167_45947262_45947439_45947523
transcript_129403.known	chr20	+	2689	17	FSM	ENSG00000100982.12	ENST00000372409.8	2689	17	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_4	57.4668382634716	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGTGAGGGTCTTGAG	45928708	True	NA	9	True	AATACA	-14	NA	45934682	45948020	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45934805_45937417_45937586_45938980_45939124_45939214_45939340_45940474_45940613_45940808_45940940_45941052_45941208_45943096_45943245_45943339_45943424_45943665_45943766_45944867_45945031_45945710_45945884_45946028_45946116_45946199_45946385_45947072_45947167_45947262_45947439_45947523
transcript_129404.nnic	chr20	+	2634	17	NNC	ENSG00000100982.12	novel	2689	17	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_16	101.014541032467	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAATGTGTGAGGGTCTT	45928708	True	NA	6	True	AATACA	-11	NA	45934682	45948017	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_45934805_45937417_45937586_45938980_45939124_45939214_45939340_45940474_45940613_45940808_45940940_45941052_45941208_45943096_45943245_45943339_45943424_45943665_45943766_45944867_45945031_45945710_45945884_45946028_45946116_45946199_45946385_45947072_45947167_45947262_45947439_45947575
transcript_129408.nnic	chr20	+	2802	17	NNC	ENSG00000100982.12	novel	2689	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_2	98.1194863100597	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGTGAGGGTCTTGAG	45928708	True	NA	9	True	AATACA	-14	NA	45934682	45948020	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_45934805_45937417_45937699_45938980_45939124_45939214_45939340_45940474_45940613_45940808_45940940_45941052_45941208_45943096_45943245_45943339_45943424_45943665_45943766_45944867_45945031_45945710_45945884_45946028_45946116_45946199_45946385_45947072_45947167_45947262_45947439_45947523
transcript_129410.nic	chr20	+	3041	16	ISM	ENSG00000100982.12	ENST00000372409.8	2689	17	-264	-3	-264	0	intron_retention	FALSE	canonical	3	273	junction_4	59.3511583711725	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGAGGGTCTTGAGGGC	45934392	True	NA	12	True	AATACA	-17	NA	45934418	45948023	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_45934805_45937417_45937586_45938980_45939124_45939214_45939340_45940474_45940613_45940808_45940940_45941052_45941208_45943096_45943245_45943339_45943424_45943665_45943766_45944867_45945031_45945710_45945884_45946028_45946116_45946199_45946385_45947072_45947167_45947262
transcript_129427.known	chr20	+	627	2	FSM	ENSG00000100982.12	ENST00000616084.1	627	2	0	0	0	0	multi-exon	FALSE	canonical	3	551	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATGTTTAAGCCTGCCTT	45928758	True	NA	115	True	GATAAA	-21	NA	45934732	45937972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_45934805_45937417
transcript_129432.known	chr20	-	4454	28	FSM	ENSG00000198026.8	ENST00000322927.3	4454	28	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_23	13.0667800448596	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTACTTTGTCTGCTTG	-45971158	True	NA	-7	True	AATAAA	-23	NA	45972203	45948659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_45949081_45949169_45949252_45949332_45949399_45949484_45949569_45949799_45949878_45949965_45950070_45950218_45950374_45950452_45950596_45952146_45952522_45952597_45952710_45953688_45953949_45957585_45957681_45957834_45957929_45959200_45959434_45960207_45960369_45960448_45960526_45960615_45960733_45960863_45960883_45962069_45962183_45963472_45963651_45963737_45963991_45965627_45965775_45967493_45967635_45967733_45968028_45968284_45968363_45969450_45969692_45971209_45971461_45972121
transcript_129436.nic	chr20	-	4859	27	ISM	ENSG00000198026.8	ENST00000322927.3	4454	28	256	0	256	0	3prime_fragment	TRUE	canonical	3	55	junction_23	12.9423505542781	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTACTTTGTCTGCTTG	-45971920	False	NA	-7	True	AATAAA	-23	NA	45971947	45948659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_45949081_45949169_45949252_45949332_45949399_45949484_45949569_45949799_45949878_45949965_45950070_45950218_45950374_45950452_45950596_45952146_45952522_45952597_45952710_45953688_45953949_45957585_45957681_45957834_45957929_45959200_45959434_45960207_45960369_45960448_45960526_45960615_45960733_45960863_45960883_45962069_45962183_45963472_45963651_45963737_45963991_45965627_45965775_45967493_45967635_45967733_45968028_45968284_45968363_45969450_45969692_45971209
transcript_129453.known	chr20	+	2336	13	FSM	ENSG00000100985.7	ENST00000372330.3	2336	13	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	17.7738493923579	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCAGACTTTATTTATAT	46008521	True	NA	21	True	AATAAA	-21	NA	46008907	46016561	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_46009065_46009865_46010099_46010482_46010632_46010921_46011051_46011142_46011317_46011573_46011748_46012136_46012314_46012426_46012583_46013254_46013535_46013656_46013797_46014123_46014275_46014370_46014475_46016249
transcript_129455.known	chr20	+	401	2	FSM	ENSG00000124140.15	ENST00000628272.1	401	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCATTCTCTTTCCTC	46021216	True	NA	4	True	AATAAA	-15	NA	46021698	46023581	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_46021887_46023368
transcript_129459.nnic	chr20	-	3292	8	NNC	ENSG00000124160.12	novel	3224	8	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	34.0665614972351	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAAGCTTTGTTCATCTT	-46087975	True	NA	-21	True	AATAAA	-35	NA	46090007	46060990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_46062890_46063336_46063681_46065028_46065229_46067054_46067182_46068501_46068639_46070209_46070537_46079386_46079454_46089816
transcript_129461.known	chr20	-	3224	8	FSM	ENSG00000124160.12	ENST00000290231.11	3224	8	0	0	0	0	multi-exon	TRUE	canonical	3	88	junction_1	16.8644052152842	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAAGCTTTGTTCATCTT	-46087930	True	NA	-21	True	AATAAA	-35	NA	46089962	46060990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_46062890_46063359_46063681_46065028_46065229_46067054_46067182_46068501_46068639_46070209_46070537_46079386_46079454_46089816
transcript_129465.nic	chr20	-	3167	7	NIC	ENSG00000124160.12	novel	3224	8	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_6	45.8381815617602	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAAGCTTTGTTCATCTT	-46087940	True	NA	-21	True	AATAAA	-35	NA	46089972	46060990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_46062890_46063359_46063681_46065028_46065229_46067054_46067182_46068501_46068639_46070209_46070537_46089816
transcript_129472.known	chr20	+	1682	9	FSM	ENSG00000101017.14	ENST00000372285.8	1682	9	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_7	13.114877048604	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAACGGGGGTGAACATG	46116507	True	NA	NA	False	ATTAAA	-22	NA	46118313	46129858	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_46118395_46121819_46121899_46122232_46122359_46122609_46122757_46123125_46123220_46126639_46126702_46128137_46128225_46128329_46128359_46128881
transcript_129475.nnic	chr20	+	1445	9	NNC	ENSG00000101017.14	novel	1682	9	NA	NA	-29	-143	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_6	48.1506425190776	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAATCTCAAAAACACTGT	46116442	True	NA	5	True	AATAAA	-21	NA	46118248	46129516	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_46118395_46121819_46121899_46122232_46122359_46122609_46122757_46123125_46123220_46126639_46126742_46128137_46128225_46128329_46128359_46128881
transcript_129479.known	chr20	+	1623	8	FSM	ENSG00000101017.14	ENST00000372276.7	1623	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	50.7253509055363	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGGGGTGAACATGCTGGG	46116509	True	NA	NA	False	ATTAAA	-27	NA	46118315	46129863	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_46118395_46121819_46121899_46122232_46122359_46122609_46122757_46123125_46123220_46128137_46128225_46128329_46128359_46128881
transcript_12948.known	chr1	-	2902	14	FSM	ENSG00000131788.16	ENST00000393045.7	2902	14	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_13	78.2115928391557	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGTGTCATGGAGATGG	-145859065	False	3041	-4	True	AATAAA	-15	NA	145859081	145848521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_145849713_145850231_145850270_145850452_145850587_145850770_145850940_145851019_145851154_145853503_145853665_145853812_145853887_145854457_145854564_145854745_145854881_145855735_145855827_145856067_145856119_145856346_145856432_145856588_145857007_145858966
transcript_129481.known	chr20	+	822	8	FSM	ENSG00000101017.14	ENST00000466205.5	822	8	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_4	50.4688224631438	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGGGCTGGCACTGACTG	46116541	True	NA	NA	False	NA	NA	NA	46118347	46129126	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_46118395_46121819_46121899_46122232_46122359_46122609_46122757_46126639_46126702_46128137_46128225_46128329_46128359_46128881
transcript_129485.nnic	chr20	+	1249	7	NIC	ENSG00000101017.14	novel	1623	8	NA	NA	-29	-143	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	53.3510387277824	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAATCTCAAAAACACTGT	46116442	True	NA	5	True	AATAAA	-21	NA	46118248	46129516	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_46118395_46121819_46121899_46122232_46122359_46122609_46122757_46128137_46128225_46128329_46128359_46128881
transcript_12949.nic	chr1	-	3138	14	NIC	ENSG00000131788.16	novel	2902	14	NA	NA	-179	0	intron_retention	FALSE	canonical	3	277	junction_12	36.8812262820938	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGTGTCATGGAGATGG	NA	False	NA	-4	True	AATAAA	-15	NA	145860015	145848521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_145849713_145850231_145850270_145850452_145850587_145850770_145850940_145851019_145851154_145853503_145853665_145853812_145853887_145854457_145854564_145854745_145854881_145855735_145855827_145856067_145856119_145856346_145856432_145856588_145857007_145859664
transcript_129496.known	chr20	-	2175	11	FSM	ENSG00000080189.15	ENST00000317734.12	2175	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	81.5082817878036	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCCTTTTAACAACTAAGA	-46360440	True	NA	NA	False	ATTAAA	-22	NA	46364458	46349529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_46350525_46350760_46350891_46352050_46352227_46354881_46354966_46355072_46355242_46355801_46355875_46356573_46356638_46357622_46357774_46358386_46358559_46358690_46358764_46364370
transcript_129513.known	chr20	-	5740	10	FSM	ENSG00000080189.15	ENST00000543605.5	5740	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_5	74.0056721216208	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTAGGGCTTTTTATT	-46360386	True	NA	2	True	ATTAAA	-24	NA	46364404	46345979	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_46350525_46350760_46350891_46352050_46352227_46354881_46354966_46355072_46355179_46355801_46355875_46356573_46356638_46357622_46357774_46358386_46358764_46364370
transcript_129520.nic	chr20	-	2043	10	NIC	ENSG00000080189.15	novel	5820	10	NA	NA	-17	-210	intron_retention	FALSE	canonical	3	23	junction_8	78.6936551319399	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTACTGCATTCTGGAGA	-46364461	False	NA	-24	True	AATAAA	-12	NA	46364475	46349739	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_46350525_46350760_46350891_46352050_46352227_46354881_46354966_46355072_46355242_46355801_46355875_46356573_46356638_46357622_46357703_46358386_46358764_46364370
transcript_129523.known	chr20	-	5820	10	FSM	ENSG00000080189.15	ENST00000372230.10	5820	10	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_9	37.5029216968821	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACTTCTGTAGGGCTTTT	-46360407	True	NA	-2	True	ATTAAA	-20	NA	46364425	46345983	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_46350525_46350760_46350891_46352050_46352227_46354881_46354966_46355072_46355242_46355801_46355875_46356573_46356638_46357622_46357774_46358386_46358764_46364370
transcript_129526.known	chr20	-	2447	10	FSM	ENSG00000080189.15	ENST00000243896.6	2447	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_9	82.1786671425944	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTTTTAACAACTAAGAGA	-46360383	True	NA	NA	False	ATTAAA	-24	NA	46364401	46349527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_46350525_46350760_46350891_46352050_46352227_46354881_46354966_46355072_46355242_46355801_46355875_46356573_46356638_46357622_46357774_46358386_46358959_46364370
transcript_129548.nic	chr20	-	2354	9	NIC	ENSG00000080189.15	novel	5820	10	NA	NA	-17	-206	intron_retention	FALSE	canonical	3	183	junction_8	39.2292939013692	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCATTCTGGAGACCTT	-46364461	False	NA	-20	True	AATAAA	-16	NA	46364475	46349735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_46350891_46352050_46352227_46354881_46354966_46355072_46355242_46355801_46355875_46356573_46356638_46357622_46357774_46358386_46358764_46364370
transcript_12956.nic	chr1	-	3125	13	NIC	ENSG00000131788.16	novel	2902	14	NA	NA	-9	0	intron_retention	FALSE	canonical	3	331	junction_9	30.3849149341504	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGTGTCATGGAGATGG	-145856804	True	NA	-4	True	AATAAA	-15	NA	145859845	145848521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_145849713_145850231_145850270_145850452_145850587_145850770_145850940_145851019_145851154_145853503_145853665_145853812_145853887_145854457_145854564_145854745_145854881_145855735_145855827_145856067_145856119_145856346_145857007_145859664
transcript_129591.nnic	chr20	-	3699	23	NNC	ENSG00000062598.18	novel	3666	22	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	2	24	junction_13	65.1115539885965	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTTCCTGTTAACAGC	-46404493	True	NA	-5	True	AATAAA	-19	NA	46406641	46366049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_46367561_46368890_46368969_46370442_46370526_46371351_46371460_46371578_46371692_46371805_46371970_46373398_46373536_46374331_46374441_46374535_46374641_46375235_46375371_46375667_46375791_46380252_46380304_46382205_46382242_46383415_46383495_46386123_46386276_46387337_46387438_46389038_46389221_46393092_46393144_46393528_46393602_46394048_46394090_46394404_46394504_46398696_46398772_46406547
transcript_129593.nnic	chr20	-	3728	23	NNC	ENSG00000062598.18	novel	3666	22	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	2	24	junction_13	63.7804375563231	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTTCCTGTTAACAGC	-46404493	True	NA	-5	True	AATAAA	-19	NA	46406641	46366049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_46367561_46368890_46368969_46370442_46370526_46371351_46371460_46371578_46371692_46371805_46371970_46373398_46373536_46374331_46374441_46374535_46374641_46375235_46375371_46375667_46375791_46380252_46380304_46382205_46382242_46383415_46383495_46386123_46386276_46387337_46387438_46389038_46389221_46393092_46393144_46393528_46393602_46394048_46394090_46394404_46394533_46398696_46398772_46406547
transcript_129596.nnic	chr20	-	3619	22	NNC	ENSG00000062598.18	novel	3574	21	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	2	24	junction_13	66.9033553487125	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTTCCTGTTAACAGC	-46404488	True	NA	-5	True	AATAAA	-19	NA	46406636	46366049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_46367561_46368890_46368969_46370442_46370526_46371351_46371460_46371578_46371692_46371805_46371970_46373398_46373536_46374331_46374441_46374535_46374641_46375235_46375371_46375667_46375791_46380252_46380304_46382205_46382242_46383415_46383495_46386123_46386276_46387337_46387438_46389038_46389221_46393092_46393144_46393528_46393602_46394048_46394090_46394404_46394504_46406547
transcript_129602.nic	chr20	-	3663	22	NIC	ENSG00000062598.18	novel	3666	22	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_20	43.01009742753	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTTCCTGTTAACAGC	-46404493	True	NA	-5	True	AATAAA	-19	NA	46406641	46366049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_46367561_46368890_46368969_46370442_46370526_46371351_46371460_46371578_46371692_46371805_46371970_46373398_46373536_46374331_46374441_46374535_46374641_46375235_46375371_46375667_46375791_46380252_46380304_46383415_46383495_46386123_46386276_46387337_46387438_46389038_46389221_46393092_46393144_46393528_46393602_46394048_46394090_46394404_46394504_46398696_46398772_46406547
transcript_129604.known	chr20	-	3666	22	FSM	ENSG00000062598.18	ENST00000290246.11	3666	22	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_20	40.5875219590395	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTTCCTGTTAACAGC	-46404467	True	NA	-5	True	AATAAA	-19	NA	46406615	46366049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_46367561_46368890_46368969_46370442_46370526_46371351_46371460_46371578_46371692_46371805_46371970_46373398_46373536_46374331_46374441_46374535_46374641_46375235_46375371_46375667_46375791_46380252_46380304_46383415_46383495_46386123_46386276_46387337_46387438_46389038_46389221_46393092_46393144_46393528_46393602_46394048_46394090_46394404_46394533_46398696_46398772_46406547
transcript_129610.known	chr20	-	3574	21	FSM	ENSG00000062598.18	ENST00000396391.5	3574	21	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_20	43.5171230666734	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACTGTGGTTCCTGTTA	-46404484	True	NA	-10	True	AATAAA	-14	NA	46406632	46366054	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_46367561_46368890_46368969_46370442_46370526_46371351_46371460_46371578_46371692_46371805_46371970_46373398_46373536_46374331_46374441_46374535_46374641_46375235_46375371_46375667_46375791_46380252_46380304_46383415_46383495_46386123_46386276_46387337_46387438_46389038_46389221_46393092_46393144_46393528_46393602_46394048_46394090_46394404_46394504_46406547
transcript_129611.nic	chr20	-	3617	21	NIC	ENSG00000062598.18	novel	3666	22	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_20	43.5171230666734	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTTCCTGTTAACAGC	-46404493	True	NA	-5	True	AATAAA	-19	NA	46406641	46366049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_46367561_46368890_46368969_46370442_46370526_46371351_46371460_46371578_46371692_46371805_46371970_46373398_46373536_46374331_46374441_46374535_46374641_46375235_46375371_46375667_46375791_46380252_46380304_46383415_46383495_46386123_46386276_46387337_46387438_46389038_46389221_46393092_46393144_46393528_46393602_46394048_46394090_46394404_46394533_46406547
transcript_129613.nic	chr20	-	3619	21	NIC	ENSG00000062598.18	novel	3666	22	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_17	57.9084622486213	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTTCCTGTTAACAGC	-46404493	True	NA	-5	True	AATAAA	-19	NA	46406641	46366049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_46367561_46368890_46368969_46370442_46370526_46371351_46371460_46371578_46371692_46371805_46371970_46373398_46373536_46374331_46374441_46374535_46374641_46375235_46375371_46375667_46375791_46380252_46380304_46383415_46383495_46386123_46386276_46387337_46387438_46389038_46389221_46393092_46393144_46394048_46394090_46394404_46394533_46398696_46398772_46406547
transcript_129640.known	chr20	-	3876	5	FSM	ENSG00000283757.1	ENST00000472805.2	3876	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	4.38748219369606	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGTAGAAATAATATACATC	NA	False	NA	NA	False	AATAAA	-30	NA	46481357	46455032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_46457915_46459218_46459623_46474500_46474689_46476231_46476326_46481049
transcript_129649.known	chr20	-	3678	22	FSM	ENSG00000062598.18	ENST00000372176.5	3678	22	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_18	59.2269932943913	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTTCCTGTTAACAGC	-46404411	True	NA	-5	True	AATAAA	-19	NA	46406559	46366049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_46367561_46368890_46368969_46370442_46370526_46371351_46371460_46371578_46371692_46371805_46371970_46373398_46373536_46374331_46374441_46374535_46374641_46375235_46375371_46375667_46375791_46380252_46380304_46383415_46383495_46386123_46386276_46387337_46387438_46389038_46389221_46393092_46393144_46393528_46393602_46393980_46394090_46394404_46394533_46398696_46398772_46406547
transcript_129658.known	chr20	-	2495	6	FSM	ENSG00000198185.12	ENST00000625284.2	2495	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_5	37.711536696348	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGAAAATATTCAACAGCAA	-46511340	True	NA	-23	True	AATAAA	-21	NA	46513555	46501087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_46503098_46504213_46504307_46504613_46504741_46509604_46509752_46512081_46512141_46513496
transcript_129660.known	chr20	-	3487	6	FSM	ENSG00000198185.12	ENST00000457685.6	3487	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	40.4405736853472	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTATGCCAAATGTGCCTC	-46511344	True	NA	3	True	NA	NA	NA	46513559	46501061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_46503098_46504213_46504307_46504613_46504741_46506306_46506459_46512081_46512141_46512539
transcript_129668.known	chr20	-	3890	5	FSM	ENSG00000198185.12	ENST00000347606.8	3890	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	33.380383460949	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTGTGCCAAATTTGT	-46511339	True	NA	NA	False	AGTAAA	-18	NA	46513554	46499631	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_46503098_46504213_46504307_46504613_46504741_46512081_46512141_46513409
transcript_12967.known	chr1	+	1473	8	FSM	ENSG00000186364.12	ENST00000334513.6	1473	8	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	6.88684045325369	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGTCTCAGTTTTTCC	145845424	True	NA	11	True	AATAAA	-22	NA	145845629	145848954	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_145845833_145846012_145846197_145846432_145846459_145846597_145846691_145847249_145847349_145847582_145847720_145848111_145848265_145848376
transcript_129697.known	chr20	-	2012	2	FSM	ENSG00000172315.6	ENST00000372102.3	2012	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	229	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTTACTGTCTTGTTTC	-46682677	True	NA	NA	False	NA	NA	NA	46689440	46685533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_46687232_46689126
transcript_129701.known	chr20	+	4227	5	FSM	ENSG00000197496.6	ENST00000359271.4	4227	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	7.11951543294907	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTGTGCAACAAACATATC	46709024	True	NA	28	True	AATAAA	-38	NA	46709648	46736347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_46709741_46725040_46726325_46726863_46726987_46729352_46729489_46733755
transcript_129707.known	chr20	+	2483	16	FSM	ENSG00000064655.19	ENST00000327619.10	2483	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	1.37598449603669	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGTAGGATGTGGTTAC	46894714	False	NA	4	True	AATAAA	-20	NA	46894842	47188844	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_46894988_46990000_46990120_47001427_47001474_47004941_47005085_47016180_47016298_47072184_47072253_47074157_47074336_47089238_47089382_47097084_47097169_47143058_47143149_47169138_47169198_47172706_47172868_47179797_47179913_47180814_47180937_47183290_47183392_47188052
transcript_129719.nnic	chr20	-	3960	23	NNC	ENSG00000101040.20	novel	3567	23	NA	NA	-12313	1	at_least_one_novel_splicesite	FALSE	canonical	3	223	junction_20	65.5787489515436	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACGATTTAAAAAAAAA	-47361340	True	NA	39	True	ATTAAA	-18	NA	47369202	47210439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_47210898_47212641_47212726_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238895_47239139_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298873_47310055_47310205_47347855_47347927_47369041
transcript_129721.nnic	chr20	-	4036	23	NNC	ENSG00000101040.20	novel	3567	23	NA	NA	-12314	1	at_least_one_novel_splicesite	FALSE	canonical	3	173	junction_20	70.9072989284059	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACGATTTAAAAAAAAA	-47361341	True	NA	39	True	ATTAAA	-18	NA	47369203	47210439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_47210898_47212641_47212726_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238895_47239139_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298948_47310055_47310205_47347855_47347927_47369041
transcript_129758.nnic	chr20	-	3873	22	NNC	ENSG00000101040.20	novel	4991	22	NA	NA	-12311	0	at_least_one_novel_splicesite	FALSE	canonical	3	149	junction_1	73.9604907704873	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAACGATTTAAAAAAAA	-47361338	True	NA	38	True	ATTAAA	-17	NA	47369200	47210440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_47210898_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238895_47239139_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298873_47310055_47310205_47347855_47347927_47369041
transcript_12976.nic	chr1	-	1713	5	ISM	ENSG00000198483.13	ENST00000355594.9	3359	14	12636	0	12636	0	3prime_fragment	FALSE	canonical	3	102	junction_4	12.369316876853	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGCTGAGTGTAATTTTT	NA	False	NA	-5	True	AATAAA	-14	NA	145873230	145866563	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_145866766_145867286_145867393_145867990_145868057_145868310_145868401_145871981
transcript_129760.nnic	chr20	-	3938	22	NNC	ENSG00000101040.20	novel	3832	22	NA	NA	-12301	0	at_least_one_novel_splicesite	FALSE	canonical	3	149	junction_1	78.9534436139641	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAACGATTTAAAAAAAA	-47361328	True	NA	38	True	ATTAAA	-17	NA	47369190	47210440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_47210898_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238895_47239139_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298948_47310055_47310205_47347855_47347927_47369041
transcript_12978.known	chr1	-	751	7	FSM	ENSG00000265241.8	ENST00000632555.1	751	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1045.93605073265	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTACTCAGGTTCAGATGC	-145895512	True	NA	-76	True	NA	NA	NA	145927447	145921631	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_145921834_145925878_145925928_145926040_145926178_145926481_145926619_145926808_145926887_145927017_145927078_145927359
transcript_129815.nnic	chr20	-	741	6	NNC	ENSG00000101040.20	novel	670	7	NA	NA	-12322	0	at_least_one_novel_splicesite	FALSE	canonical	3	223	junction_3	74.171153422338	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGCCTCCGTCAAAGAAC	-47369186	False	NA	NA	False	AATACA	-36	NA	47369211	47291795	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_47291889_47294665_47294780_47298728_47298873_47310055_47310205_47347855_47347927_47369041
transcript_129816.nnic	chr20	-	1002	6	NNC	ENSG00000101040.20	novel	5362	22	NA	NA	-12508	0	at_least_one_novel_splicesite	FALSE	canonical	3	173	junction_3	90.9799978017146	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGCCTCCGTCAAAGAAC	-47369372	False	NA	NA	False	AATACA	-36	NA	47369397	47291795	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_47291889_47294665_47294780_47298728_47298948_47310055_47310205_47347855_47347927_47369041
transcript_129819.nnic	chr20	-	331	3	NNC	ENSG00000101040.20	novel	341	3	NA	NA	-12310	0	at_least_one_novel_splicesite	FALSE	canonical	3	303	junction_2	26.5	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAAGAAACCTGGC	-47361337	True	NA	NA	False	NA	NA	NA	47369199	47310102	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_47310205_47347855_47347927_47369041
transcript_12982.known	chr1	-	796	6	FSM	ENSG00000265241.8	ENST00000369307.4	796	6	0	0	0	0	multi-exon	FALSE	canonical	3	401	junction_4	976.461898898262	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGACTGAACTCTATGTAT	-145895525	True	NA	70	True	NA	NA	NA	145927460	145925641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_145925928_145926040_145926178_145926481_145926619_145926808_145926884_145927017_145927078_145927359
transcript_129820.known	chr20	-	3832	22	FSM	ENSG00000101040.20	ENST00000352431.6	3832	22	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_21	97.6627544432481	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAACGATTTAAAAAAAA	-47355252	True	NA	38	True	ATTAAA	-17	NA	47356699	47210440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_47210898_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238895_47239139_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298948_47310055_47310205_47347855_47347927_47356656
transcript_129821.known	chr20	-	4053	23	FSM	ENSG00000101040.20	ENST00000471951.7	5281	23	2	1226	2	1	multi-exon	FALSE	canonical	3	84	junction_22	103.090398026631	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACGATTTAAAAAAAAA	-47355250	True	NA	39	True	ATTAAA	-18	NA	47356697	47210439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_47210898_47212641_47212726_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238757_47239139_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298948_47310055_47310205_47347855_47347927_47356656
transcript_129822.known	chr20	+	7939	23	FSM	ENSG00000124151.19	ENST00000372004.7	7939	23	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_19	14.0815217998037	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAAAGAGTTTTTTTTTT	47498814	True	NA	16	True	AATAAA	-21	NA	47501901	47656877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_47502020_47583182_47583262_47622228_47622331_47623910_47624084_47625380_47625482_47627001_47627177_47627560_47627750_47627921_47628024_47633495_47633637_47634047_47634196_47635321_47635714_47635890_47636763_47637647_47637784_47639007_47639203_47639576_47639823_47639924_47640052_47642212_47642385_47647072_47647367_47649004_47649098_47650981_47651277_47652405_47652581_47652930_47653073_47653405
transcript_129824.known	chr20	+	7961	23	FSM	ENSG00000124151.19	ENST00000371998.8	7961	23	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_19	14.0815217998037	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAGCCTAAAGAGTTTTT	47498799	True	NA	11	True	AATAAA	-16	NA	47501886	47656872	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_47502020_47583182_47583262_47622228_47622331_47623910_47624084_47625380_47625482_47627001_47627177_47627560_47627750_47627921_47628024_47633495_47633637_47634047_47634196_47635321_47635714_47635890_47636763_47637647_47637784_47639007_47639203_47639576_47639823_47639924_47640052_47642212_47642385_47647072_47647367_47649004_47649110_47650981_47651277_47652405_47652581_47652930_47653073_47653405
transcript_129826.nic	chr20	+	927	2	ISM	ENSG00000124151.19	ENST00000371997.3	6750	23	-47	71759	7	-40090	5prime_fragment	FALSE	canonical	3	62	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAAAATTTTAAGGAGGC	47498806	True	NA	NA	False	AATAGA	-6	NA	47501893	47583983	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_47502020_47583182
transcript_129831.nic	chr20	-	3576	21	FSM	ENSG00000196562.15	ENST00000688720.1	3808	21	-30	262	-22	0	multi-exon	FALSE	canonical	3	80	junction_1	31.8466638755145	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCGCAGTTGTGGACAT	-47785501	False	NA	-36	True	AATAAA	-27	NA	47785511	47657667	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_47658393_47659398_47659453_47659696_47659731_47661772_47661897_47663069_47663213_47663452_47663623_47664129_47664190_47665198_47665294_47665856_47665954_47666259_47666489_47672197_47672394_47676493_47676624_47677077_47677135_47678675_47678805_47682993_47683170_47684430_47684582_47690125_47690296_47702518_47702671_47736702_47736943_47757188_47757464_47785342
transcript_129832.known	chr20	-	4915	21	FSM	ENSG00000196562.15	ENST00000359930.8	4915	21	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_20	45.6776477065096	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-47786489	True	NA	NA	False	NA	NA	NA	47786586	47656911	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_47658393_47659398_47659453_47659696_47659731_47661772_47661897_47663069_47663213_47663452_47663623_47664129_47664190_47665198_47665294_47665856_47665954_47666259_47666489_47672197_47672394_47676493_47676624_47677077_47677135_47678675_47678805_47682993_47683170_47684430_47684582_47690125_47690296_47702518_47702671_47736702_47736943_47757188_47757464_47785834
transcript_129833.nic	chr20	-	3755	20	NIC	ENSG00000196562.15	novel	3808	21	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	102	junction_1	23.5021069368453	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATTTTGTAAAAGGCCAT	-47785501	False	NA	-28	True	NA	NA	NA	47785511	47657434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_47658393_47659696_47659731_47661772_47661897_47663069_47663213_47663452_47663623_47664129_47664190_47665198_47665294_47665856_47665954_47666259_47666489_47672197_47672394_47676493_47676624_47677077_47677135_47678675_47678805_47682993_47683170_47684430_47684582_47690125_47690296_47702518_47702671_47736702_47736943_47757188_47757464_47785342
transcript_129836.nic	chr20	-	3522	20	NIC	ENSG00000196562.15	novel	3808	21	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	102	junction_1	23.5021069368453	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCGCAGTTGTGGACAT	-47785501	False	NA	-36	True	AATAAA	-27	NA	47785511	47657667	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_47658393_47659696_47659731_47661772_47661897_47663069_47663213_47663452_47663623_47664129_47664190_47665198_47665294_47665856_47665954_47666259_47666489_47672197_47672394_47676493_47676624_47677077_47677135_47678675_47678805_47682993_47683170_47684430_47684582_47690125_47690296_47702518_47702671_47736702_47736943_47757188_47757464_47785342
transcript_129838.nic	chr20	-	3927	20	NIC	ENSG00000196562.15	novel	4238	21	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_19	46.0311829751765	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCGCAGTTGTGGACAT	-47786524	True	NA	-36	True	AATAAA	-27	NA	47786621	47657667	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_47658393_47659696_47659731_47661772_47661897_47663069_47663213_47663452_47663623_47664129_47664190_47665198_47665294_47665856_47665954_47666259_47666489_47672197_47672394_47676493_47676624_47677077_47677135_47678675_47678805_47682993_47683170_47684430_47684582_47690125_47690296_47702518_47702671_47736702_47736943_47757188_47757464_47786047
transcript_129843.known	chr20	+	8828	39	FSM	ENSG00000124198.10	ENST00000679436.1	8828	39	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	17.3726669451384	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAATAAAATTTTAAAAAGT	48919456	False	NA	-11	True	ATTAAA	-29	NA	48921889	49036672	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_48922011_48941198_48941230_48941863_48941988_48951322_48951470_48952704_48952885_48953555_48953791_48963829_48963899_48965874_48966024_48969146_48969278_48971119_48971355_48972325_48972426_48973144_48973285_48974765_48974875_48976015_48976200_48984728_48984841_48985407_48985614_48988303_48988389_48988490_48988663_48989284_48989437_48989555_48989685_48991039_48991199_48994450_48994599_48995782_48995883_48998192_48998234_48998335_48998506_49005069_49005222_49010231_49010405_49011923_49012085_49013563_49013695_49013830_49013961_49016279_49016416_49017248_49017388_49017495_49017551_49018883_49018999_49023050_49023182_49025312_49025482_49028529_49028669_49032048_49032167_49033022
transcript_129845.known	chr20	+	6583	38	FSM	ENSG00000124198.10	ENST00000681021.1	6583	38	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_10	14.6922657709523	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTTGTGATTATTAGAGA	48919456	False	NA	-47	True	NA	NA	NA	48921889	49033568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_48922011_48941198_48941230_48941863_48941988_48951322_48951470_48952704_48952885_48953555_48953791_48963829_48963899_48965871_48966024_48969146_48969278_48971119_48971355_48972325_48972426_48973144_48973285_48974765_48974875_48976015_48976200_48984728_48984841_48985407_48985614_48988303_48988389_48988490_48988663_48989284_48989437_48989555_48989685_48991039_48991199_48994450_48994599_48995782_48995883_48998192_48998234_48998335_48998506_49005069_49005222_49010231_49010405_49011923_49012085_49013563_49013695_49013830_49013961_49016279_49016416_49017248_49017388_49017495_49017551_49018883_49018999_49023050_49023182_49025312_49025482_49028529_49028669_49032048
transcript_129846.known	chr20	+	8731	37	FSM	ENSG00000124198.10	ENST00000681399.1	8731	37	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	23.0227175783259	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAATAAAATTTTAAAAAGT	48919395	False	NA	-11	True	ATTAAA	-29	NA	48921828	49036672	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_48922011_48951322_48951470_48952704_48952885_48953555_48953791_48963829_48963899_48965877_48966024_48969146_48969278_48971119_48971355_48972325_48972426_48973144_48973285_48974765_48974875_48976015_48976200_48984728_48984841_48985407_48985614_48988303_48988389_48988490_48988663_48989284_48989437_48989555_48989685_48991039_48991199_48994450_48994599_48995782_48995883_48998192_48998234_48998335_48998506_49005069_49005222_49010231_49010405_49011923_49012085_49013563_49013695_49013830_49013961_49016279_49016416_49017248_49017388_49017495_49017551_49018883_49018999_49023050_49023182_49025312_49025482_49028529_49028669_49032048_49032167_49033022
transcript_12985.known	chr1	-	3991	6	FSM	ENSG00000271601.4	ENST00000604000.4	3991	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	2.8	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGACTGACTCTTTCTTG	-145957744	True	NA	0	True	ATTAAA	-21	NA	145958017	145933422	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_145936553_145936907_145936986_145937603_145937700_145942712_145942854_145947618_145947783_145957635
transcript_129850.known	chr20	+	9031	39	FSM	ENSG00000124198.10	ENST00000371917.5	9031	39	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_10	14.7629468040073	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGTTTCTAATGTGTAG	48919277	True	NA	10	True	AATAAA	-14	NA	48921710	49036693	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_48922011_48941198_48941230_48941863_48941988_48951322_48951470_48952704_48952885_48953555_48953791_48963829_48963899_48965871_48966024_48969146_48969278_48971119_48971355_48972325_48972426_48973144_48973285_48974765_48974875_48976015_48976200_48984728_48984841_48985407_48985614_48988303_48988389_48988490_48988663_48989284_48989437_48989555_48989685_48991039_48991199_48994450_48994599_48995782_48995883_48998192_48998234_48998335_48998506_49005069_49005222_49010231_49010405_49011923_49012085_49013563_49013695_49013830_49013961_49016279_49016416_49017248_49017388_49017495_49017551_49018883_49018999_49023050_49023182_49025312_49025482_49028529_49028669_49032048_49032167_49033022
transcript_129883.known	chr20	+	3550	25	FSM	ENSG00000124207.17	ENST00000262982.3	3550	25	0	0	0	0	multi-exon	FALSE	canonical	3	1617	junction_8	140.692014896211	1316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATCTTAAGGGCAGGTT	49031771	True	NA	32	True	AATAAA	-22	NA	49046311	49096949	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_49046424_49058452_49058549_49063201_49063345_49066191_49066294_49066364_49066511_49067189_49067281_49068714_49068823_49070204_49070298_49072285_49072454_49072567_49072698_49074784_49074851_49075317_49075521_49076979_49077065_49078560_49078623_49084025_49084163_49085282_49085387_49088008_49088107_49089246_49089398_49089537_49089747_49090741_49090840_49090936_49091023_49092045_49092128_49094139_49094287_49094731_49094964_49096348
transcript_129904.known	chr20	+	3459	24	FSM	ENSG00000124207.17	ENST00000396192.7	3459	24	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_8	403.560275585006	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCAGGTTTTCAGTGCTCT	49031705	True	NA	43	True	AATAAA	-33	NA	49046245	49096960	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_49046424_49058452_49058549_49063201_49063345_49066191_49066294_49066364_49066511_49067189_49067281_49068714_49068823_49070204_49070298_49072567_49072698_49074784_49074851_49075317_49075521_49076979_49077065_49078560_49078623_49084025_49084163_49085282_49085387_49088008_49088107_49089246_49089398_49089537_49089747_49090741_49090840_49090936_49091023_49092045_49092128_49094139_49094287_49094731_49094964_49096348
transcript_12993.known	chr1	-	1620	4	FSM	ENSG00000131779.11	ENST00000369306.8	1620	4	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_3	3.09120616516523	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGGTCTGGTCCCTCAT	-145886782	False	31935	-2	True	ATTAAA	-19	NA	145918717	145911349	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_145912567_145916816_145917019_145917700_145917817_145918632
transcript_129952.known	chr20	-	3651	14	FSM	ENSG00000124214.21	ENST00000371856.7	3651	14	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_12	286.575660982324	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGGTCCTGTTGAGCA	-49170871	True	NA	NA	False	AATAAA	-15	NA	49188334	49113338	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_49114894_49115781_49115868_49117125_49117249_49117776_49118097_49118332_49118409_49119981_49120129_49123091_49123236_49124374_49124588_49135832_49135932_49151581_49151748_49153932_49154072_49165996_49166286_49174194_49174270_49188115
transcript_129953.known	chr20	-	3334	14	FSM	ENSG00000124214.21	ENST00000340954.11	3334	14	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_13	279.188553706469	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTTAATTTATTCT	-49170904	True	NA	-10	True	AATAAA	-14	NA	49188367	49113522	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_49114894_49115781_49115868_49117125_49117249_49117776_49118097_49118332_49118409_49119981_49120129_49123091_49123236_49124374_49124588_49135832_49135932_49151581_49151748_49153932_49154072_49174194_49174270_49179121_49179245_49188115
transcript_129967.known	chr20	-	3211	13	FSM	ENSG00000124214.21	ENST00000360426.8	3211	13	0	0	0	0	multi-exon	FALSE	canonical	3	643	junction_8	86.7715711253147	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTTAATTTATTCT	-49170904	True	NA	-10	True	AATAAA	-14	NA	49188367	49113522	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_49114894_49115781_49115868_49117125_49117249_49117776_49118097_49118332_49118409_49119981_49120129_49123091_49123236_49124374_49124588_49135832_49135932_49151581_49151748_49153932_49154072_49174194_49174270_49188115
transcript_12997.known	chr1	-	3607	4	FSM	ENSG00000272031.3	ENST00000606888.3	3607	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTTGTCACTTCTGCC	-145964551	True	NA	NA	False	AATAAA	-15	NA	145964575	145959440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_145961880_145962420_145962969_145963309_145963538_145964183
transcript_129976.known	chr20	-	3154	12	FSM	ENSG00000124214.21	ENST00000371802.5	3154	12	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_11	290.974026843498	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTTAATTTATTCT	-49170904	True	NA	-10	True	AATAAA	-14	NA	49188367	49113522	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_49114894_49115781_49115868_49117125_49117249_49117776_49118097_49118332_49118409_49119981_49120129_49123091_49123236_49124374_49124606_49135832_49135932_49151581_49151748_49153932_49154072_49188115
transcript_12998.known	chr1	+	1178	8	FSM	ENSG00000121851.13	ENST00000369314.2	1178	8	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_4	8.05339325111737	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTTGTGGGTGAGGCC	145963976	True	NA	16	True	AATAAA	-16	NA	145964689	145978848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_145964769_145974824_145974992_145975306_145975437_145977083_145977153_145977482_145977540_145977777_145977852_145977982_145978097_145978360
transcript_12999.known	chr1	-	2905	8	FSM	ENSG00000265972.6	ENST00000582401.6	2905	8	0	0	0	0	multi-exon	TRUE	canonical	3	86	junction_5	13.0587370080302	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTGAGATGGCTTTGG	-145995869	True	NA	NA	False	AATAAA	-23	NA	145996579	145992434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_145993887_145994015_145994168_145994280_145994438_145994543_145994801_145994928_145995032_145995143_145995292_145995403_145995477_145996016
transcript_129992.known	chr20	-	3136	12	FSM	ENSG00000124214.21	ENST00000347458.9	3136	12	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_11	224.1745925253	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTTAATTTATTCT	-49170904	True	NA	-10	True	AATAAA	-14	NA	49188367	49113522	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_49114894_49115781_49115868_49117125_49117249_49117776_49118097_49118332_49118409_49119981_49120129_49123091_49123236_49124374_49124588_49135832_49135932_49151581_49151748_49153932_49154072_49188115
transcript_129999.known	chr20	-	1085	7	FSM	ENSG00000124214.21	ENST00000437404.2	1085	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_6	345.498191022761	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAACTTTTCTGAACAC	-49170904	True	NA	NA	False	AGTAAA	-38	NA	49188367	49124374	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_49124606_49135832_49135932_49151581_49151748_49153932_49154072_49174194_49174270_49179121_49179245_49188115
transcript_13.known	ERCC-00041	+	1121	1	FSM	ERCC-00041A	EF011069	1121	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00041_+_0_1100
transcript_130001.nic	chr20	-	933	6	ISM	ENSG00000124214.21	ENST00000360426.8	3211	13	-1	10864	-1	-12	5prime_fragment	FALSE	canonical	3	643	junction_1	67.8751795577735	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCATAGTCAAGGTGAGAAC	-49170905	True	NA	NA	False	AGTAAA	-26	NA	49188368	49124386	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_49124588_49135832_49135932_49151581_49151748_49153932_49154072_49174194_49174270_49188115
transcript_130002.nic	chr20	-	950	6	ISM	ENSG00000124214.21	ENST00000360426.8	3211	13	-109	10955	-109	-103	5prime_fragment	FALSE	canonical	3	643	junction_1	67.8751795577735	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGCCATAGCTGTTCTTG	NA	False	NA	NA	False	AAGAAA	-3	NA	49188476	49124477	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_49124588_49135832_49135932_49151581_49151748_49153932_49154072_49174194_49174270_49188115
transcript_130013.nic	chr20	+	2760	22	NIC	ENSG00000124228.15	novel	2570	21	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_9	178.427916935524	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATCCAAGTGTATATCTT	NA	False	NA	21	True	ATTAAA	-27	NA	49219318	49244073	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_49219542_49221451_49221599_49222956_49223017_49223267_49223434_49224944_49224992_49225112_49225200_49226429_49226536_49228714_49228889_49230198_49230350_49231022_49231116_49233305_49233406_49233567_49233710_49234934_49235089_49236149_49236232_49236332_49236511_49238948_49239056_49239235_49239339_49241892_49241988_49242082_49242207_49242593_49242682_49243628_49243704_49243815
transcript_130021.known	chr20	+	2570	21	FSM	ENSG00000124228.15	ENST00000618172.5	2570	21	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_12	75.864270246276	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATCCAAGTGTATATCTT	49206688	True	NA	21	True	ATTAAA	-27	NA	49219415	49244073	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_49219542_49221451_49221599_49222956_49223017_49223267_49223434_49224944_49224992_49225112_49225200_49226429_49226536_49228714_49228889_49230198_49230350_49233305_49233406_49233567_49233710_49234934_49235089_49236149_49236232_49236332_49236511_49238948_49239056_49239235_49239339_49241892_49241988_49242082_49242207_49242593_49242682_49243628_49243704_49243815
transcript_130040.known	chr20	+	4929	19	FSM	ENSG00000124228.15	ENST00000484427.5	4929	19	0	0	0	0	multi-exon	FALSE	canonical	3	522	junction_5	72.8712715836784	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGTGTATATCTTATTA	49206619	True	NA	25	True	ATTAAA	-31	NA	49219346	49244077	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_49219542_49221451_49221599_49222956_49223017_49223267_49223434_49224944_49224992_49225112_49225200_49226429_49226536_49228714_49228889_49230198_49230350_49233305_49233406_49233567_49236232_49236332_49236511_49238948_49239056_49239235_49239339_49241892_49241988_49242082_49242207_49242593_49242682_49243628_49243704_49243815
transcript_130045.nic	chr20	+	2078	17	ISM	ENSG00000124228.15	ENST00000618172.5	2570	21	-97	2130	-28	-2130	5prime_fragment	FALSE	canonical	3	474	junction_12	58.1871979046938	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGAAGTTTATGAAGGAT	NA	False	NA	23	True	AAGAAA	-2	NA	49219318	49241943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_49219542_49221451_49221599_49222956_49223017_49223267_49223434_49224944_49224992_49225112_49225200_49226429_49226536_49228714_49228889_49230198_49230350_49233305_49233406_49233567_49233710_49234934_49235089_49236149_49236232_49236332_49236511_49238948_49239056_49239235_49239339_49241892
transcript_130048.nic	chr20	+	1949	16	ISM	ENSG00000124228.15	ENST00000618172.5	2570	21	-41	4757	28	-4757	5prime_fragment	FALSE	canonical	3	474	junction_12	58.9389137629424	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGAGGAAGAAGGAGAA	49206647	True	NA	13	True	NA	NA	NA	49219374	49239316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_49219542_49221451_49221599_49222956_49223017_49223267_49223434_49224944_49224992_49225112_49225200_49226429_49226536_49228714_49228889_49230198_49230350_49233305_49233406_49233567_49233710_49234934_49235089_49236149_49236232_49236332_49236511_49238948_49239056_49239235
transcript_130062.nic	chr20	-	3120	8	ISM	ENSG00000124201.15	ENST00000396105.6	7209	14	-371	11517	-2	-1484	5prime_fragment	FALSE	canonical	3	23	junction_7	5.99319341811515	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAACTCACTTCCTTGGGT	-49278022	True	NA	NA	False	NA	NA	NA	49278428	49257416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_49257665_49260462_49260578_49263333_49263484_49264715_49264865_49266134_49266267_49269941_49271751_49275778_49275888_49278020
transcript_130066.known	chr20	+	1075	6	FSM	ENSG00000177410.13	ENST00000450535.5	1075	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	496.47582015643	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	NA	False	NA	16	True	AATAAA	-17	NA	49278177	49289260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_49278717_49279103_49279209_49280484_49280571_49280902_49280965_49281751_49281819_49289044
transcript_130068.known	chr20	+	596	5	FSM	ENSG00000177410.13	ENST00000458653.5	596	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	326.858818911162	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	49278206	False	NA	16	True	AATAAA	-17	NA	49278270	49289260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_49278398_49279103_49279209_49280484_49280571_49280902_49280965_49289044
transcript_130069.known	chr20	+	568	5	FSM	ENSG00000177410.13	ENST00000428008.6	568	5	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	308.223133460161	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	49244549	True	NA	16	True	AATAAA	-17	NA	49278639	49289260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_49278739_49279103_49279209_49280484_49280571_49280902_49280965_49289044
transcript_13007.nic	chr1	-	842	4	ISM	ENSG00000265972.6	ENST00000582401.6	2905	8	-28	2567	-28	-1163	5prime_fragment	FALSE	canonical	3	86	junction_1	7.93025150224688	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCTGCATGTTCATTCC	-145995897	True	NA	NA	False	AAAAAG	-9	NA	145996607	145995001	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_145995032_145995143_145995292_145995403_145995477_145996016
transcript_130071.known	chr20	+	2608	5	FSM	ENSG00000177410.13	ENST00000371743.8	2608	5	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_3	311.962637987308	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAAGTCTGTGCTTCCTGC	NA	False	NA	NA	False	ACTAAA	-34	NA	49278177	49290860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_49278717_49279103_49279209_49280484_49280571_49280902_49280965_49289044
transcript_130074.known	chr20	+	504	4	FSM	ENSG00000177410.13	ENST00000326677.9	504	4	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	355.359911451287	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	49244551	True	NA	16	True	AATAAA	-17	NA	49278641	49289260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_49278739_49279103_49279209_49280484_49280571_49289044
transcript_130075.known	chr20	+	946	4	FSM	ENSG00000177410.13	ENST00000441722.5	946	4	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_3	330.942089596755	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	NA	False	NA	16	True	AATAAA	-17	NA	49278177	49289260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_49278717_49279103_49279209_49280484_49280571_49289044
transcript_130078.nic	chr20	+	419	3	ISM	ENSG00000124228.15	ENST00000462328.2	824	7	-113	3461	-28	-3461	5prime_fragment	FALSE	canonical	3	538	junction_2	22	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAACAGAGGTGAGAAGA	NA	False	NA	31	True	AAGAAA	-2	NA	49219318	49223005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_49219542_49221451_49221599_49222956
transcript_130081.known	chr20	+	860	3	FSM	ENSG00000177410.13	ENST00000417721.5	860	3	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_2	499	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	NA	False	NA	16	True	AATAAA	-17	NA	49278177	49289260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_49278717_49279103_49279209_49289044
transcript_130083.known	chr20	+	640	2	FSM	ENSG00000177410.13	ENST00000663883.1	640	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTCTGAATGTTTTATT	49244551	True	NA	NA	False	AAAAAG	-6	NA	49278641	49279646	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_49278739_49279103
transcript_130084.known	chr20	+	627	2	FSM	ENSG00000177410.13	ENST00000667889.1	627	2	0	0	0	0	multi-exon	FALSE	canonical	3	1272	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTTATTCTCACAGTT	49244551	True	NA	NA	False	AAAAAG	-15	NA	49278641	49279655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_49278717_49279103
transcript_130085.known	chr20	+	527	3	FSM	ENSG00000177410.13	ENST00000659056.1	527	3	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_1	31.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	49280307	False	NA	16	True	AATAAA	-17	NA	49280321	49289260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_49280571_49280902_49280965_49289044
transcript_130089.known	chr20	-	4722	9	FSM	ENSG00000158470.5	ENST00000371711.4	4722	9	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_7	11.9784963580576	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTGGTCATTTCTCTT	-49704408	True	NA	0	True	AGTAAA	-23	NA	49713878	49632944	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_49636460_49637340_49637443_49639677_49639801_49640477_49640666_49642467_49642585_49643525_49643651_49646964_49647079_49656567_49656703_49713575
transcript_130092.known	chr20	+	6309	16	FSM	ENSG00000197818.12	ENST00000417961.5	6309	16	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_6	10.3987178696863	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGTGTCTGTGTTCATG	49812696	False	NA	20	True	AATAAA	-20	NA	49812712	49892241	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_49812949_49815007_49815190_49823060_49823142_49839540_49839600_49845035_49845120_49849578_49849681_49850761_49850845_49855437_49855582_49862928_49863068_49864738_49864845_49874704_49874822_49877980_49878064_49880923_49881036_49883845_49884067_49886751_49886899_49887828
transcript_130097.known	chr20	+	6147	16	FSM	ENSG00000197818.12	ENST00000361573.3	6147	16	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_8	7.81167217836375	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTGTCTGTGTTCATGT	49811755	True	NA	21	True	AATAAA	-21	NA	49812827	49892242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_49812949_49815007_49815190_49823060_49823142_49839540_49839600_49845035_49845120_49849578_49849681_49850809_49850845_49855437_49855582_49862928_49863068_49864738_49864845_49874704_49874822_49877980_49878064_49880923_49881036_49883845_49884067_49886751_49886899_49887828
transcript_130105.nnic	chr20	-	2724	3	NNC	ENSG00000158480.11	novel	4043	3	NA	NA	6	-1435	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	34.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTTCAACGTGGTTA	-49914294	True	NA	-12	True	AATAAA	-13	NA	49915523	49904828	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_49906846_49908154_49908593_49915254
transcript_130106.known	chr20	-	4043	3	FSM	ENSG00000158480.11	ENST00000289431.10	4043	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	5.5	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGTTTGGGGTTTTAT	-49914300	True	NA	NA	False	AATAAA	-19	NA	49915529	49903390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_49906846_49908154_49908593_49915379
transcript_130107.nnic	chr20	+	1442	7	NNC	ENSG00000124226.11	novel	2447	6	NA	NA	-18	-3	at_least_one_novel_splicesite	FALSE	canonical	2	24	junction_6	426.441770155473	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGGTAAGCTATGGTTC	49924485	True	NA	8	True	AATAAA	-16	NA	49936358	49953882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_49936553_49941560_49941712_49945381_49945489_49946135_49946251_49949247_49949356_49952075_49952138_49953177
transcript_13011.known	chr1	+	668	2	FSM	ENSG00000287978.1	ENST00000660431.1	668	2	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTCTCTTTGTTCTCCT	146387129	True	NA	8	True	AATAAA	-18	NA	146387201	146388092	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_146387323_146387545
transcript_130110.known	chr20	+	2447	6	FSM	ENSG00000124226.11	ENST00000244061.6	2447	6	0	0	0	0	multi-exon	FALSE	canonical	3	1048	junction_2	64.2171316706064	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTAAGCTATGGTTCTTG	49924523	True	NA	11	True	AATAAA	-19	NA	49936396	49953885	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_49936553_49941560_49941712_49945381_49945489_49946135_49946251_49949247_49949356_49952075
transcript_130112.known	chr20	+	2438	6	FSM	ENSG00000124226.11	ENST00000622999.3	2438	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	464.00068965466	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTAAGTGGTAAGCTATG	49924503	True	NA	4	True	AATAAA	-12	NA	49936376	49953878	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_49936553_49941582_49941712_49945381_49945489_49946135_49946251_49949247_49949356_49952075
transcript_130113.known	chr20	+	624	5	FSM	ENSG00000124226.11	ENST00000623528.3	624	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	512.622912090359	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGCTATCTGTCTCATGT	49924462	True	NA	-32	True	NA	NA	NA	49936335	49952152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_49936553_49945381_49945489_49946135_49946251_49949247_49949356_49952075
transcript_130114.known	chr20	+	1705	3	FSM	ENSG00000124216.4	ENST00000244050.3	1705	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	4	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTGGTGTCATAGAGGA	49982364	True	NA	NA	False	AATAAA	-24	NA	49982979	49988886	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_49983142_49983823_49984352_49987871
transcript_130116.known	chr20	-	2028	7	FSM	ENSG00000240849.11	ENST00000453505.6	2028	7	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_6	116.891212482186	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCTGAGACAGTGAATTA	-50149418	True	NA	NA	False	NA	NA	NA	50153734	50124043	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_50125180_50127974_50128188_50129545_50129691_50130855_50130948_50143501_50143622_50151211_50151316_50153516
transcript_130120.known	chr20	-	7703	6	FSM	ENSG00000240849.11	ENST00000371652.9	7703	6	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_5	29.5472502950782	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGAGTTATTTTTTCTT	-50149407	True	NA	1	True	AATAAA	-19	NA	50153723	50118253	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_50125180_50127974_50128188_50129545_50129691_50130855_50130948_50143501_50143622_50153516
transcript_130126.known	chr20	-	2258	5	FSM	ENSG00000244687.13	ENST00000557021.5	2258	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_4	1432.34440690778	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-50094475	True	NA	-1	True	AATAAA	-25	NA	50113198	50081123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_50082915_50084128_50084255_50096671_50096821_50098881_50098982_50113106
transcript_130131.known	chr20	-	2432	5	FSM	ENSG00000244687.13	ENST00000617119.4	2432	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	1433.34277128676	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-50094475	True	NA	-1	True	AATAAA	-25	NA	50113198	50081123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_50082915_50084128_50084255_50096671_50096821_50111288_50111563_50113106
transcript_130137.known	chr20	-	813	5	FSM	ENSG00000240849.11	ENST00000371658.3	813	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	105.965501461561	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGATGGAGAGGACATCT	-50149324	False	NA	NA	False	NA	NA	NA	50153640	50124968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_50125180_50127974_50128188_50129545_50129691_50143501_50143622_50153516
transcript_130141.known	chr20	-	549	4	FSM	ENSG00000244687.13	ENST00000490555.1	549	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	1306.23964110725	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCCTGCAAGAGCTTCGG	-50094410	True	NA	-83	True	NA	NA	NA	50113133	50082856	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_50082915_50084128_50084255_50096482_50096821_50113106
transcript_130142.known	chr20	-	2110	4	FSM	ENSG00000244687.13	ENST00000371674.8	2110	4	0	0	0	0	multi-exon	FALSE	canonical	3	2636	junction_3	123.839501865205	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-50094427	True	NA	-1	True	AATAAA	-25	NA	50113150	50081123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_50082915_50084128_50084255_50096671_50096821_50113106
transcript_130143.known	chr20	-	2536	4	FSM	ENSG00000244687.13	ENST00000340309.7	2536	4	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_3	1299.25217807099	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-50114895	True	NA	-1	True	AATAAA	-25	NA	50115954	50081123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_50082915_50084128_50084255_50096671_50096821_50115484
transcript_130150.known	chr20	-	535	4	FSM	ENSG00000244687.13	ENST00000492371.6	535	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1384.75132143725	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAAAAAGAAAAACCACAGG	-50114895	True	NA	6	True	NA	NA	NA	50115954	50082767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_50082915_50084128_50084255_50115484_50115622_50115829
transcript_130153.known	chr20	-	1983	3	FSM	ENSG00000244687.13	ENST00000396059.7	1983	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_2	1427	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-50094449	True	NA	-1	True	AATAAA	-25	NA	50113172	50081123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_50082915_50084128_50084255_50113106
transcript_130154.known	chr20	-	2387	3	FSM	ENSG00000244687.13	ENST00000415862.6	2387	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1468	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-50114895	True	NA	-1	True	AATAAA	-25	NA	50115954	50081123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_50082915_50084128_50084255_50115484
transcript_130155.known	chr20	-	1973	3	FSM	ENSG00000244687.13	ENST00000371657.9	1973	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	1307.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-50094416	True	NA	-1	True	AATAAA	-25	NA	50113139	50081123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_50082915_50096671_50096821_50113106
transcript_130156.known	chr20	-	566	3	FSM	ENSG00000244687.13	ENST00000467839.5	566	3	0	0	0	0	multi-exon	FALSE	canonical	3	2636	junction_2	82	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCCAGTGAGGTAGAGAT	-50094423	True	NA	NA	False	NA	NA	NA	50113146	50083877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_50084255_50096671_50096821_50113106
transcript_130160.known	chr20	-	649	3	FSM	ENSG00000244687.13	ENST00000461960.5	649	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	1308	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGTCAAGAAATTGATTT	-50094402	True	NA	NA	False	NA	NA	NA	50113125	50095789	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_50096271_50096671_50096821_50113106
transcript_130163.known	chr20	-	2222	6	FSM	ENSG00000240849.11	ENST00000371650.9	2222	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	102.334744832828	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAGAACCACAGCGGAAAA	-50149418	True	NA	28	True	AAGAAA	-10	NA	50153734	50123736	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_50125180_50127974_50128188_50129545_50129691_50130864_50130948_50143501_50143622_50153516
transcript_130164.known	chr20	-	628	3	FSM	ENSG00000244687.13	ENST00000490289.5	628	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	1316.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTTGTAATGCGTAGCT	-50094423	True	NA	NA	False	NA	NA	NA	50113146	50094943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_50095383_50096671_50096821_50113106
transcript_130165.known	chr20	+	740	3	FSM	ENSG00000231742.6	ENST00000427333.6	740	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCACTAATGTTTTTT	50172399	True	NA	9	True	AATAAA	-30	NA	50172534	50173592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_50172789_50172922_50173018_50173201
transcript_130166.known	chr20	+	764	3	FSM	ENSG00000231742.6	ENST00000411453.3	764	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCCCTTCATTTCAGAG	50172380	True	NA	NA	False	AATAAA	-21	NA	50172515	50176676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_50172789_50172922_50173018_50176280
transcript_130170.known	chr20	+	1839	1	FSM	ENSG00000172216.6	ENST00000303004.5	1839	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCCTTTTGGGGGCAGT	50189594	True	NA	13	True	AATAAA	-21	NA	50190829	50192668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_50190800_50192700
transcript_130171.known	chr20	+	2060	5	FSM	ENSG00000203999.9	ENST00000671482.1	2060	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.866025403784439	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTTTTTATGTGAACATA	50308863	False	NA	NA	False	AATAAA	-22	NA	50308896	50314922	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_50308952_50311613_50311707_50311804_50312015_50312351_50312431_50313299
transcript_130172.known	chr20	+	3979	10	FSM	ENSG00000196396.10	ENST00000371621.5	3979	10	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_9	6.28539361054709	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTTTTTTGACTTTTTG	50504488	True	NA	NA	False	ATTAAA	-21	NA	50510382	50585241	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_50510591_50561362_50561454_50564968_50565070_50568379_50568479_50574516_50574655_50578419_50578630_50579167_50579330_50579702_50579927_50581264_50581461_50582691
transcript_130175.nic	chr20	+	4557	9	ISM	ENSG00000196396.10	ENST00000371621.5	3979	10	-22	675	-22	-194	intron_retention	FALSE	canonical	3	46	junction_4	5.79735931265262	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGGTGTTTTGGTATAAT	50504466	True	NA	1	True	AATAAA	-30	NA	50510360	50584566	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_50510591_50561362_50561454_50564968_50565070_50568379_50568479_50574516_50574655_50578419_50578630_50579167_50579330_50579702_50579927_50581264
transcript_130181.nic	chr20	+	571	5	ISM	ENSG00000196396.10	ENST00000371621.5	3979	10	-33	10686	29	-10205	5prime_fragment	FALSE	canonical	3	46	junction_4	7.07106781186548	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGATGATCTTTGAAGACAC	50504455	True	NA	NA	False	AAAAAG	-9	NA	50510349	50574555	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_50510591_50561362_50561454_50564968_50565070_50568379_50568479_50574516
transcript_130187.known	chr20	-	4391	22	FSM	ENSG00000042062.13	ENST00000327979.8	4391	22	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	3.49991901428818	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAGACAGCAGTTGTTTC	-50691182	False	360	4	True	ATTAAA	-29	NA	50691542	50586107	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_50587333_50587801_50587893_50589685_50589770_50592343_50592547_50593034_50593197_50594552_50594715_50595368_50595505_50596139_50596264_50597579_50597711_50602071_50602645_50604644_50604775_50608388_50608535_50608612_50608739_50608911_50608956_50609292_50609357_50609572_50609723_50610852_50610907_50611180_50611205_50616001_50616081_50619985_50620133_50630737_50630857_50691125
transcript_13019.known	chr1	-	5343	8	FSM	ENSG00000131791.8	ENST00000254101.4	5343	8	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_7	25.0363001765559	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGAGTTATTGATTGAT	-147172409	False	773	NA	False	AATAAA	-19	NA	147172470	147155105	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_147159643_147161711_147161781_147162439_147162574_147166497_147166619_147166845_147166940_147167766_147167934_147171988_147172168_147172428
transcript_130194.known	chr20	+	4579	3	FSM	ENSG00000124171.9	ENST00000371610.7	4579	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	2	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTTGTTTGAAATTATA	50727930	True	NA	NA	False	AATAAA	-22	NA	50731579	50753741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_50731853_50737856_50738080_50749658
transcript_130197.known	chr20	+	787	6	FSM	ENSG00000124243.19	ENST00000609336.5	787	6	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_4	123.869931783302	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCGAGATGGGGTCTCACT	50791345	True	NA	1	True	TTTAAA	-15	NA	50795030	50876723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_50795174_50818210_50818283_50830278_50830381_50841765_50841901_50875996_50876094_50876485
transcript_130199.known	chr20	+	1114	5	FSM	ENSG00000124243.19	ENST00000371608.8	1114	5	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_1	11.1130553854464	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGGTCTGGTGTGAGAA	50791375	True	NA	16	True	AATAAA	-16	NA	50795060	50877177	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_50795174_50818210_50818283_50830278_50830381_50841765_50841901_50876485
transcript_130202.known	chr20	+	365	4	FSM	ENSG00000124243.19	ENST00000445038.5	365	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	107.524674170888	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCACCACCCCCGCACCTG	50791384	True	NA	NA	False	NA	NA	NA	50795069	50876572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_50795174_50818210_50818283_50830278_50830381_50876485
transcript_130206.known	chr20	-	1084	10	FSM	ENSG00000000419.14	ENST00000371584.9	1084	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	150.265772779884	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTTCTCAATTTTCGT	-50956420	True	NA	-30	True	ATTAAA	-27	NA	50958532	50934944	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_50935237_50936147_50936263_50940864_50940934_50941104_50941210_50942030_50942127_50945736_50945763_50945846_50945924_50948628_50948663_50955185_50955286_50958362
transcript_130207.known	chr20	-	1161	10	FSM	ENSG00000000419.14	ENST00000371582.8	1161	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	148.606199295776	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGCCTTCATTAGAGTA	-50956443	True	NA	-18	True	AATAAA	-26	NA	50958555	50934866	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_50935237_50936147_50936263_50940864_50940934_50941128_50941210_50942030_50942127_50945736_50945763_50945846_50945924_50948628_50948663_50955185_50955286_50958362
transcript_130209.known	chr20	-	1054	9	FSM	ENSG00000000419.14	ENST00000371588.10	1054	9	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_8	32.4027390817505	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGCTGCCTTCATTAGA	-50956420	True	NA	-21	True	AATAAA	-23	NA	50958532	50934869	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_50935237_50936147_50936263_50940864_50940934_50942030_50942127_50945736_50945763_50945846_50945924_50948628_50948663_50955185_50955286_50958362
transcript_130210.known	chr20	-	1097	9	FSM	ENSG00000000419.14	ENST00000466152.5	1097	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	128.686088506101	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGCCTTCATTAGAGTA	-50956438	True	NA	-18	True	AATAAA	-26	NA	50958550	50934866	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_50935237_50936147_50936263_50940864_50940956_50942030_50942127_50945736_50945763_50945846_50945924_50948628_50948663_50955185_50955286_50958362
transcript_130212.nic	chr20	-	1005	8	NIC	ENSG00000000419.14	novel	1054	9	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_2	123.138548151326	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGCTGCCTTCATTAGA	-50956440	True	NA	-21	True	AATAAA	-23	NA	50958552	50934869	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_50935237_50936147_50936263_50942030_50942127_50945736_50945763_50945846_50945924_50948628_50948663_50955185_50955286_50958362
transcript_130224.nic	chr20	-	2406	5	NIC	ENSG00000026559.14	novel	967	4	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_4	44.1503114371801	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCTCTAATGTGGAT	-51021554	True	NA	NA	False	AATACA	-17	NA	51023150	51003655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_51004807_51009564_51010365_51012358_51012417_51013728_51013845_51022869
transcript_130228.nic	chr20	-	2518	4	NIC	ENSG00000026559.14	novel	2189	3	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_3	47.0767694539698	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCTCTAATGTGGAT	-51021566	True	NA	NA	False	AATACA	-17	NA	51023162	51003655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_51004807_51009564_51010365_51012358_51012417_51022653
transcript_130230.nic	chr20	-	2302	4	NIC	ENSG00000026559.14	novel	2189	3	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_3	21.483844059096	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCTCTAATGTGGAT	-51021566	True	NA	NA	False	AATACA	-17	NA	51023162	51003655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_51004807_51009564_51010365_51012358_51012417_51022869
transcript_130233.nnic	chr20	-	2442	4	NIC	ENSG00000026559.14	novel	2189	3	NA	NA	-137	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	53.2979048994111	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCTCTAATGTGGAT	NA	False	NA	NA	False	AATACA	-17	NA	51023244	51003655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_51004807_51009564_51010365_51013728_51013845_51022869
transcript_130235.known	chr20	-	967	4	FSM	ENSG00000026559.14	ENST00000424171.5	967	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	37.0675059857013	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGGGAGGAAGAGGACGACG	-51021498	True	NA	NA	False	NA	NA	NA	51023094	51009796	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_51010365_51012358_51012417_51013728_51013845_51022869
transcript_130239.known	chr20	-	2189	3	FSM	ENSG00000026559.14	ENST00000371571.5	2189	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	43	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCTCTAATGTGGAT	-51021511	True	NA	NA	False	AATACA	-17	NA	51023107	51003655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_51004807_51009564_51010365_51022869
transcript_130240.known	chr20	-	802	3	FSM	ENSG00000026559.14	ENST00000433903.5	802	3	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	44.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCGACGACATCCTCAACG	-51021485	True	NA	NA	False	NA	NA	NA	51023081	51010048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_51010365_51012358_51012417_51022653
transcript_130241.known	chr20	-	1096	3	FSM	ENSG00000026559.14	ENST00000439216.5	1096	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	16.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAGCCCACGCCCCGCG	-51021511	True	NA	NA	False	NA	NA	NA	51023107	51009564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_51010365_51012358_51012417_51022869
transcript_130299.known	chr20	-	5209	4	FSM	ENSG00000101115.13	ENST00000217086.9	5209	4	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_3	49.5939064357261	1925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGGTGTATATAAATTTT	-51793908	True	NA	-38	True	AATAAA	-23	NA	51802521	51782330	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_51784685_51788860_51789142_51790021_51792353_51802278
transcript_130306.known	chr20	-	1918	4	FSM	ENSG00000101115.13	ENST00000395997.3	1918	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	97.1642366763044	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGAACTTGCGTGGAAGG	-51793862	True	NA	-89	True	AAGAAA	-21	NA	51802475	51784264	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_51784685_51788860_51789142_51791332_51792353_51802278
transcript_130310.known	chr20	-	2545	9	FSM	ENSG00000020256.20	ENST00000361387.6	2545	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	25.0599281722833	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGATGTAAGGAACACTC	-52189507	True	NA	-5	True	AATAAA	-19	NA	52191697	52084010	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_52085267_52088391_52088644_52097372_52097436_52098437_52098588_52160122_52160375_52164694_52164758_52165863_52166026_52186831_52187072_52191590
transcript_130313.known	chr20	-	3040	6	FSM	ENSG00000020256.20	ENST00000371515.8	3040	6	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_5	23.832750575626	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATGTTAATGATTCTTT	-52189578	True	NA	-13	True	AATAAA	-22	NA	52191768	52151277	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_52153429_52160122_52160375_52164694_52164758_52165863_52166026_52186831_52187066_52191590
transcript_130318.known	chr20	-	762	5	FSM	ENSG00000020256.20	ENST00000395989.7	762	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	13.4420050587701	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGCGCCAAGTTCAAAAT	-52104900	False	147	NA	False	NA	NA	NA	52104923	52085240	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_52085267_52088391_52088644_52097372_52097436_52098437_52098588_52104652
transcript_130319.known	chr20	-	2234	5	FSM	ENSG00000020256.20	ENST00000371523.8	2234	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	13.0575648572006	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGATGTAAGGAACACTC	NA	False	NA	-5	True	AATAAA	-19	NA	52105644	52084010	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_52085267_52088391_52088644_52097372_52097436_52098437_52098588_52105131
transcript_130321.known	chr20	-	2876	5	FSM	ENSG00000020256.20	ENST00000346617.8	2876	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	30.761176830544	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATGTTAATGATTCTTT	-52189570	True	NA	-13	True	AATAAA	-22	NA	52191760	52151277	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_52153429_52160122_52160375_52164694_52164758_52186831_52187072_52191590
transcript_130326.known	chr20	-	5790	6	FSM	ENSG00000171940.14	ENST00000371471.7	5790	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_5	15.3284050050878	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGAGTTTTAGTGTTTAT	-53593543	False	NA	-5	True	AATATA	-18	NA	53593839	53567070	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_53569265_53571720_53571854_53575726_53577281_53578333_53578451_53581460_53583169_53593755
transcript_130327.nnic	chr20	-	5927	6	NNC	ENSG00000171940.14	novel	5790	6	NA	NA	-488	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	13.9283882771841	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGAGTTTTAGTGTTTAT	-53594031	False	NA	-5	True	AATATA	-18	NA	53594327	53567070	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_53569265_53571720_53571854_53575726_53577281_53578333_53578451_53581460_53583169_53594106
transcript_130339.known	chr20	+	1230	4	FSM	ENSG00000101132.10	ENST00000371419.7	1230	4	0	0	0	0	multi-exon	FALSE	canonical	3	2746	junction_1	173.513368040877	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAGACAAACATTTTGGG	54172669	True	NA	10	True	AATAAA	-26	NA	54208086	54219961	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_54208125_54214350_54214459_54215299_54215441_54219018
transcript_130343.nic	chr20	+	527	3	ISM	ENSG00000101132.10	ENST00000371419.7	1230	4	-257	4538	-257	1013	5prime_fragment	FALSE	canonical	3	2746	junction_1	210.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTAGAAGAAGCAAAGGTA	NA	False	NA	16	True	AAGAAA	-10	NA	54207829	54215423	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_54208125_54214350_54214459_54215299
transcript_130345.known	chr20	+	1965	8	FSM	ENSG00000101134.12	ENST00000262593.10	1965	8	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	3.49343407446785	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTCTTTGGATTCTGGC	54474809	True	NA	10	True	AATAAA	-18	NA	54475592	54651169	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_54476013_54554932_54555041_54588482_54588598_54588686_54588807_54591615_54591806_54610387_54610524_54643457_54643579_54650414
transcript_130347.known	chr20	+	742	2	FSM	ENSG00000101134.12	ENST00000491469.1	742	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTTCATTACATTGAATT	54474842	True	NA	5	True	AATAAA	-17	NA	54475625	54495154	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_54476013_54494799
transcript_130348.known	chr20	+	2987	3	FSM	ENSG00000124098.10	ENST00000371384.4	2987	3	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_2	8	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTGTTTCTCTAATTTA	56357005	True	NA	NA	False	AATAAA	-22	NA	56358973	56368663	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_56359192_56365086_56365263_56366070
transcript_130351.nic	chr20	-	2467	11	NIC	ENSG00000087586.18	novel	2145	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	96	junction_10	393.513201811578	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	-56378417	True	NA	-17	True	AATAAA	-15	NA	56392216	56369389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56388686_56388785_56390555_56390666_56391942
transcript_130352.nic	chr20	-	2287	11	NIC	ENSG00000087586.18	novel	2145	10	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_10	398.403074787331	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	-56378448	True	NA	-17	True	AATAAA	-15	NA	56392247	56369389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56388686_56388785_56390555_56390666_56392153
transcript_130353.nic	chr20	-	2325	11	NIC	ENSG00000087586.18	novel	2223	10	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	124	junction_10	388.918294761252	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	-56378500	True	NA	-17	True	AATAAA	-15	NA	56392299	56369389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56388686_56388785_56390555_56390666_56392167
transcript_130360.known	chr20	-	2145	10	FSM	ENSG00000087586.18	ENST00000395911.5	2145	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_9	379.653773396658	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	-56378416	True	NA	-17	True	AATAAA	-15	NA	56392215	56369389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56388686_56388785_56392153
transcript_130363.nic	chr20	-	2369	10	NIC	ENSG00000087586.18	novel	2223	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	96	junction_9	367.766062250461	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	-56378417	True	NA	-17	True	AATAAA	-15	NA	56392216	56369389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56390555_56390666_56391942
transcript_130364.known	chr20	-	2238	10	FSM	ENSG00000087586.18	ENST00000395914.5	2238	10	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_9	374.090139002307	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGAGTGCTGTGTAATT	-56378496	True	NA	-16	True	AATAAA	-16	NA	56392295	56369388	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56390555_56390666_56392153
transcript_130365.known	chr20	-	2223	10	FSM	ENSG00000087586.18	ENST00000312783.10	2223	10	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_9	361.773034366938	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	-56378496	True	NA	-17	True	AATAAA	-15	NA	56392295	56369389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56390555_56390666_56392167
transcript_130373.known	chr20	-	2248	9	FSM	ENSG00000087586.18	ENST00000347343.6	2248	9	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_8	296.17855151074	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	-56378406	True	NA	-17	True	AATAAA	-15	NA	56392205	56369389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56391942
transcript_130374.known	chr20	-	2169	9	FSM	ENSG00000087586.18	ENST00000395913.7	2169	9	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_8	281.392408390845	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	NA	False	NA	-17	True	AATAAA	-15	NA	56392337	56369389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56392153
transcript_130375.known	chr20	-	2033	9	FSM	ENSG00000087586.18	ENST00000395915.8	2033	9	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_8	253.331798240963	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	-56378416	True	NA	-17	True	AATAAA	-15	NA	56392215	56369389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56392167
transcript_130397.known	chr20	-	810	5	FSM	ENSG00000087586.18	ENST00000456249.5	810	5	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_4	450.308991138307	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAACTAGCTTTTGAGACT	-56378421	True	NA	NA	False	NA	NA	NA	56392220	56386256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_56386534_56388155_56388203_56388686_56388785_56390555_56390666_56391942
transcript_13040.known	chr1	+	2967	23	FSM	ENSG00000131778.20	ENST00000369258.8	2967	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	150.414166512345	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTATTGCTTTCTTTC	147232565	True	NA	13	True	AATAAA	-15	NA	147242683	147295762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_130402.nic	chr20	+	1826	6	NIC	ENSG00000101138.12	novel	1236	5	NA	NA	-11	-416	combination_of_known_junctions	FALSE	canonical	3	88	junction_1	116.403780007352	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGAATTTTCATTTGGTT	NA	False	NA	5	True	ATTAAA	-13	NA	56392359	56404046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_56392539_56395520_56395722_56397206_56397485_56397643_56397842_56398966_56399358_56403467
transcript_130403.nic	chr20	+	2035	6	NIC	ENSG00000101138.12	novel	1236	5	NA	NA	-11	-207	combination_of_known_junctions	FALSE	canonical	3	88	junction_1	116.403780007352	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTGTTATATATTTTT	NA	False	NA	5	True	AATAAA	-15	NA	56392359	56404255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_56392539_56395520_56395722_56397206_56397485_56397643_56397842_56398966_56399358_56403467
transcript_130404.known	chr20	+	4032	6	FSM	ENSG00000101138.12	ENST00000217109.9	4032	6	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_1	44.7633778886268	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTAGTTTATTTTTTTT	56389399	True	NA	8	True	AATAAA	-16	NA	56392644	56406362	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_56392714_56395520_56395722_56397206_56397485_56397643_56397842_56398966_56399358_56403467
transcript_130409.nic	chr20	+	2035	6	NIC	ENSG00000101138.12	novel	2234	6	NA	NA	-8	-207	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	143.072009841198	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTGTTATATATTTTT	56389391	True	NA	5	True	AATAAA	-15	NA	56392636	56404255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_56392816_56395520_56395722_56397206_56397485_56397643_56397842_56398966_56399358_56403467
transcript_130418.known	chr20	+	1745	10	FSM	ENSG00000022277.13	ENST00000023939.8	1745	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	247.682193820635	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTTTTTATCTTTTC	NA	False	NA	25	True	AATAAA	-21	NA	56468584	56518886	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_56468767_56472325_56472416_56473300_56473396_56474677_56474772_56476984_56477125_56484110_56484190_56513314_56513429_56516934_56516990_56517105_56517202_56518086
transcript_130419.known	chr20	+	2176	9	FSM	ENSG00000022277.13	ENST00000357348.10	2176	9	0	0	0	0	multi-exon	FALSE	canonical	3	565	junction_7	32.6417581481145	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTTTGTCATGGACTTTT	56462301	True	NA	2	True	AATAAA	-13	NA	56468626	56519449	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_56468767_56473300_56473396_56474677_56474772_56476984_56477125_56484110_56484190_56513314_56513429_56516934_56516990_56517105_56517202_56518086
transcript_130421.known	chr20	+	1572	8	FSM	ENSG00000022277.13	ENST00000395881.7	1572	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	217.964516865119	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTTTTTATCTTTTCT	56462288	True	NA	26	True	AATAAA	-22	NA	56468613	56518887	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_56468767_56473300_56473396_56474677_56474772_56476984_56477125_56484110_56484190_56513314_56513429_56517105_56517202_56518086
transcript_130425.nnic	chr20	+	2720	7	Fusion	ENSG00000087510.7_ENSG00000289199.1	novel	2862	7	NA	NA	-32	0	multi-exon	TRUE	canonical	3	23	junction_1	26.2979720384165	41	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGCTATAGGTTTTTGT	56624200	True	NA	20	True	AATAAA	-24	NA	56625044	56639283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr20_+_56625190_56631204_56631691_56631804_56631857_56633352_56633570_56634149_56634269_56636609_56636755_56637727
transcript_130426.known	chr20	+	2862	7	FSM	ENSG00000087510.7	ENST00000201031.3	2862	7	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	14.4846662217517	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGCTATAGGTTTTTGT	56628109	True	NA	20	True	AATAAA	-24	NA	56629305	56639283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_56629593_56631204_56631691_56631804_56631857_56633352_56633570_56634149_56634269_56636609_56636755_56637727
transcript_130428.nnic	chr20	+	3378	7	NNC	ENSG00000087510.7	novel	482	2	NA	NA	-48	0	at_least_one_novel_splicesite	TRUE	canonical	3	15	junction_1	29.2655466756085	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGCTATAGGTTTTTGT	56628989	False	NA	20	True	AATAAA	-24	NA	56630185	56639283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_56630989_56631204_56631691_56631804_56631857_56633352_56633570_56634149_56634269_56636609_56636755_56637727
transcript_130433.known	chr20	-	4021	7	FSM	ENSG00000101144.13	ENST00000395863.8	4021	7	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_3	12.7856256093404	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGGCCTGTGTCTGTCT	-57265944	True	NA	-15	True	AATAAA	-21	NA	57266641	57168752	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_57171109_57173199_57173311_57174930_57175008_57183721_57183920_57202474_57202624_57228228_57228422_57265704
transcript_130437.known	chr20	-	1746	6	FSM	ENSG00000101144.13	ENST00000395864.7	1746	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	62.9933329805623	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTAATAAATGTCACAATAA	-57266313	False	NA	-74	True	NA	NA	NA	57266342	57170530	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_57171109_57173199_57173311_57174930_57175008_57202474_57202624_57228228_57228422_57265704
transcript_130439.known	chr20	-	1857	6	FSM	ENSG00000101144.13	ENST00000450594.6	1857	6	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_2	13.1514257782189	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGAGTTCATTTATTTC	-57266600	False	NA	NA	False	TATAAA	-19	NA	57266629	57172995	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_57173311_57174930_57175008_57183721_57183920_57202474_57202624_57228228_57228422_57265704
transcript_130446.nnic	chr20	+	1751	13	NNC	ENSG00000101146.13	novel	2385	12	NA	NA	8	-7	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_12	154.365614874413	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCGAGCTTCCTTTGTCC	57347322	True	NA	37	True	AATAAA	-17	NA	57351230	57378456	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_57351423_57354031_57354129_57354711_57354817_57356445_57356539_57365355_57365443_57366806_57366894_57367007_57367080_57368704_57368813_57373474_57373582_57373662_57373739_57374606_57374802_57376178_57376267_57378012
transcript_130449.known	chr20	+	2385	12	FSM	ENSG00000101146.13	ENST00000395841.7	2385	12	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_9	23.631468024474	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTGCACTCAGTGGTTT	57347346	True	NA	4	True	AATAAA	-19	NA	57351254	57379202	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_57351423_57354031_57354129_57354711_57354817_57356445_57356539_57365355_57365443_57366806_57366894_57367007_57367080_57368704_57368813_57373474_57373582_57373662_57373739_57374606_57374802_57378012
transcript_13045.known	chr1	+	2937	23	FSM	ENSG00000131778.20	ENST00000622533.4	2937	23	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	156.40440800366	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTTTTATTGCTTTCTT	147232565	True	NA	11	True	AATAAA	-13	NA	147242683	147295760	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_147242831_147252622_147252736_147254897_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264589_147265935_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_130450.known	chr20	+	2362	12	FSM	ENSG00000101146.13	ENST00000371242.6	2362	12	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	121.184648401786	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGGTTTAAATTCTTT	57347314	True	NA	13	True	AATAAA	-28	NA	57351222	57379211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_57351359_57354031_57354129_57354711_57354817_57356445_57356539_57365355_57365443_57366806_57366894_57367007_57367080_57368704_57368813_57373474_57373582_57373662_57373739_57374606_57374802_57378012
transcript_130451.known	chr20	+	1503	11	FSM	ENSG00000101146.13	ENST00000527947.5	1503	11	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_9	17.1011695506477	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCGGGTCATGGAGCTTTC	57347343	True	NA	NA	False	GGGGCT	-23	NA	57351251	57375106	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_57351423_57354031_57354129_57354711_57354817_57356445_57356539_57365355_57365443_57366806_57366894_57367007_57367080_57368704_57368813_57373474_57373582_57373662_57373739_57374606
transcript_130452.known	chr20	+	1156	11	FSM	ENSG00000101146.13	ENST00000492498.5	1156	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	138.4241308443	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGGAGACTCTGGCTCA	57347365	True	NA	NA	False	NA	NA	NA	57351273	57378099	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_57351423_57354031_57354129_57354711_57354817_57356445_57356539_57365355_57365443_57366806_57366894_57367007_57367080_57368704_57368813_57373662_57373739_57374606_57374802_57378012
transcript_130456.known	chr20	+	2393	4	FSM	ENSG00000132819.17	ENST00000356208.10	2393	4	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_1	42.7733042393916	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGATCTAATTTTTCTCAA	57385417	True	NA	71	True	AATAAA	-23	NA	57391395	57409333	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_57391819_57392653_57392778_57393278_57393334_57407542
transcript_130457.known	chr20	-	3500	11	FSM	ENSG00000124092.13	ENST00000243914.8	3500	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	1.6	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTTATATGTCAGCAT	-57525038	True	NA	2	True	AATAAA	-23	NA	57525140	57497165	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_57498702_57503435_57503602_57508605_57508789_57512591_57512753_57514591_57514742_57515713_57515835_57518757_57518892_57519206_57519378_57523067_57523279_57523662_57524217_57525027
transcript_130458.known	chr20	-	3864	10	FSM	ENSG00000124092.13	ENST00000429804.7	3864	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.72848324290045	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTATATGTCAGCATTG	NA	False	NA	4	True	AATAAA	-25	NA	57525652	57497163	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_57498702_57503435_57503602_57508605_57508789_57512591_57512753_57515713_57515835_57518757_57518892_57519206_57519378_57523067_57523279_57523662_57524217_57525027
transcript_130466.known	chr20	-	4546	4	FSM	ENSG00000124225.16	ENST00000347215.8	4546	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	77.6587978846498	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTCACTTCTTTGGCC	-57709823	True	NA	2	True	AATAAA	-23	NA	57710589	57648391	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_57652599_57653032_57653087_57659542_57659698_57710459
transcript_130468.known	chr20	-	4627	4	FSM	ENSG00000124225.16	ENST00000265626.8	4627	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	90.8074886779719	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTTTTCACTTCTTTGG	NA	False	NA	0	True	AATAAA	-21	NA	57711536	57648393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_57652599_57653032_57653087_57659542_57659698_57711323
transcript_130469.known	chr20	+	2625	1	FSM	ENSG00000278709.2	ENST00000614771.2	2625	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTGTATTTTTCTTTGC	57709595	True	NA	39	True	GATAAA	-44	NA	57710155	57712780	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_57710200_57712800
transcript_130479.known	chr20	-	1474	10	FSM	ENSG00000124224.18	ENST00000244070.7	1474	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	12.9252361059697	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCTGTGTCGTGTGTTG	-58308598	True	NA	-6	True	ATTAAA	-13	NA	58309439	58245745	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_58246253_58247321_58247507_58248114_58248274_58250886_58250953_58251756_58251865_58271362_58271506_58272768_58272876_58286313_58286447_58309225_58309271_58309418
transcript_130483.known	chr20	+	8651	7	FSM	ENSG00000124209.4	ENST00000244040.4	8651	7	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_3	6.10100173924104	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGCCTCCCAAATGGTT	58308227	True	NA	10	True	AATAAA	-21	NA	58309714	58367507	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58310013_58311042_58311123_58343717_58343800_58353272_58353345_58353431_58353539_58354155_58354266_58359605
transcript_130487.known	chr20	+	7829	6	FSM	ENSG00000124164.16	ENST00000475243.6	7829	6	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_1	10.0876161703348	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGCTTCAGTGTAAAATT	58387011	True	NA	13	True	AATAAA	-25	NA	58389228	58451101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58389518_58418210_58418364_58434601_58434706_58438944_58439026_58440906_58441084_58444076
transcript_130492.known	chr20	+	937	4	FSM	ENSG00000124164.16	ENST00000520497.1	937	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	137.681597253308	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTGGTAGGCCTTGGT	58389347	False	NA	132	True	NA	NA	NA	58389365	58444531	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58389518_58418210_58418364_58440906_58441084_58444076
transcript_130493.known	chr20	+	1834	3	FSM	ENSG00000124164.16	ENST00000395802.7	1834	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	132.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGTCATTTTGTCAC	58389294	False	NA	19	True	AATAAA	-17	NA	58389312	58445552	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58389518_58418210_58418364_58444076
transcript_130497.known	chr20	-	3887	4	FSM	ENSG00000198768.11	ENST00000371149.8	3887	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	4.98887651569859	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTTGCTGGTTATTAAA	NA	False	NA	-4	True	AATAAA	-19	NA	58515399	58459100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_58461555_58467105_58467659_58470608_58470748_58514658
transcript_13050.known	chr1	+	2862	22	FSM	ENSG00000131778.20	ENST00000650721.1	2862	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	182.968678781277	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGCTAGTTGCATAATAA	147232558	True	NA	-25	True	AATATA	-40	NA	147242676	147295724	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_130515.known	chr20	+	1917	13	FSM	ENSG00000215440.12	ENST00000525967.5	1917	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	157.017957217921	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCCCCAGGTCCTGTGC	NA	False	NA	NA	False	NA	NA	NA	58689130	58715633	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58689212_58691723_58691831_58693736_58693923_58694421_58694593_58698683_58698774_58699196_58699279_58701015_58701159_58707122_58707201_58712478_58712580_58713419_58713544_58713916_58714094_58714559_58714671_58715167
transcript_13052.known	chr1	+	2792	22	FSM	ENSG00000131778.20	ENST00000651410.1	2792	22	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_6	147.30421111511	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCTAATGGTTTTATTG	147232568	True	NA	4	True	AATAAA	-6	NA	147242686	147295753	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_130522.known	chr20	+	2191	12	FSM	ENSG00000215440.12	ENST00000356091.11	2191	12	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_8	71.2515042613427	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCCTCGTTCTTCTTTC	58690933	True	NA	20	True	ATTAAA	-22	NA	58692799	58715844	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58693051_58693736_58693923_58694421_58694593_58698683_58698774_58699196_58699279_58701015_58701159_58707122_58707201_58712478_58712580_58713419_58713544_58713916_58714094_58714559_58714671_58715167
transcript_130538.known	chr20	+	4273	10	FSM	ENSG00000124222.22	ENST00000359617.8	4273	10	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	140.492607775307	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGCAATCCTAGTATTAA	58639372	True	NA	17	True	AATAAA	-24	NA	58651282	58679500	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58651435_58652072_58652139_58659622_58659635_58667489_58667598_58667986_58668128_58669290_58669454_58670511_58670604_58671153_58671298_58673630_58673712_58676186
transcript_13054.known	chr1	+	2841	22	FSM	ENSG00000131778.20	ENST00000651420.1	2841	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	196.443999394125	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTTTTATTGCTTTCTT	147232582	True	NA	11	True	AATAAA	-13	NA	147242700	147295760	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_147242831_147252622_147252736_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_130549.known	chr20	+	4937	9	FSM	ENSG00000124222.22	ENST00000371141.8	4937	9	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	122.76902856584	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGGGTTCATGTTTTCTT	58639372	True	NA	43	True	ATTAAA	-32	NA	58651282	58679526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58652139_58659622_58659635_58667489_58667598_58667986_58668128_58669290_58669454_58670511_58670604_58671153_58671298_58673630_58673712_58676186
transcript_13055.known	chr1	+	2827	22	FSM	ENSG00000131778.20	ENST00000652616.1	2827	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	191.543249232466	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGCTAGTTGCATAATAA	147232554	True	NA	-25	True	AATATA	-40	NA	147242672	147295724	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_147242831_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_13056.known	chr1	+	2461	21	FSM	ENSG00000131778.20	ENST00000650714.1	2461	21	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	201.593179448115	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGAATCAGGATCTGGT	147232579	True	NA	NA	False	AATAGA	-9	NA	147242697	147295585	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_130561.known	chr20	+	4897	9	FSM	ENSG00000124222.22	ENST00000355957.9	4897	9	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	117.170748802762	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGGGTTCATGTTTTCTT	58639361	True	NA	43	True	ATTAAA	-32	NA	58651271	58679526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58652088_58659622_58659635_58667489_58667598_58667986_58668128_58669290_58669454_58670511_58670604_58671153_58671298_58673630_58673712_58676186
transcript_13057.known	chr1	+	2782	21	FSM	ENSG00000131778.20	ENST00000467213.5	2782	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	199.758422851203	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTATTGCTTTCTTTC	147232565	True	NA	13	True	AATAAA	-15	NA	147242683	147295762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_13059.known	chr1	+	2717	21	FSM	ENSG00000131778.20	ENST00000650828.1	2717	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	231.746731368535	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCTAATGGTTTTATTG	147232579	True	NA	4	True	AATAAA	-6	NA	147242697	147295753	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_147242831_147255812_147255928_147256530_147256563_147259836_147259919_147264428_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_130594.known	chr20	+	4329	8	FSM	ENSG00000124222.22	ENST00000358029.8	4329	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	127.081365547384	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGGGTTCATGTTTTCTT	58651770	False	NA	43	True	ATTAAA	-32	NA	58651878	58679526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58652139_58667489_58667598_58667986_58668128_58669290_58669454_58670511_58670604_58671153_58671298_58673630_58673712_58676186
transcript_130596.known	chr20	+	812	8	FSM	ENSG00000124222.22	ENST00000464640.5	812	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	135.960978795763	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATATGTCTTTCAAGACT	58651991	False	NA	34	True	NA	NA	NA	58652006	58673711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58652088_58659622_58659635_58667489_58667598_58667986_58668128_58669290_58669454_58670511_58670604_58671163_58671298_58673630
transcript_130599.known	chr20	+	942	8	FSM	ENSG00000124222.22	ENST00000467096.5	942	8	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	141.81318553589	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCGGGTGTGAGGGGCTT	58651757	False	NA	NA	False	NA	NA	NA	58651865	58676328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58652088_58659622_58659635_58667489_58667598_58667986_58668128_58670511_58670604_58671153_58671298_58673630_58673712_58676186
transcript_130607.known	chr20	+	4552	8	FSM	ENSG00000124222.22	ENST00000371132.8	4552	8	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	91.8721383005662	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGGGTTCATGTTTTCTT	58651593	False	NA	43	True	ATTAAA	-32	NA	58651604	58679526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58652088_58667489_58667598_58667986_58668128_58669290_58669454_58670511_58670604_58671153_58671298_58673630_58673712_58676186
transcript_130624.nic	chr20	+	3890	7	NIC	ENSG00000124222.22	novel	4552	8	NA	NA	-18	-843	intron_retention	FALSE	canonical	3	102	junction_3	128.138813618496	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTAGCGCTGGGTTTC	58639324	True	NA	NA	False	NA	NA	NA	58651234	58678657	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_58652088_58667489_58667598_58667986_58668128_58670511_58670604_58671153_58671298_58673630_58673712_58676186
transcript_130636.known	chr20	-	594	1	FSM	ENSG00000268649.5	ENST00000596276.1	594	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGATGTTTGCTCTTGTAT	NA	False	NA	0	True	AATAAA	-18	NA	58817725	58817131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_58817100_58817700
transcript_130673.known	chr20	+	1089	13	FSM	ENSG00000087460.29	ENST00000306090.12	1089	13	0	0	0	0	multi-exon	FALSE	canonical	3	1256	junction_1	1742.04961300379	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGGAACCCCCAAATTTA	58833451	False	NA	-36	True	NA	NA	NA	58840843	58910829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58840887_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_130676.known	chr20	+	1567	13	FSM	ENSG00000087460.29	ENST00000657090.1	1567	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1984.5167530297	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58837165	False	NA	19	True	AATAAA	-21	NA	58839782	58911192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58839941_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_130682.known	chr20	+	1800	13	FSM	ENSG00000087460.29	ENST00000472183.6	1800	13	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	1952.68317358165	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58840698	False	NA	19	True	AATAAA	-21	NA	58841484	58911192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58841876_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_130686.known	chr20	+	4027	13	FSM	ENSG00000087460.29	ENST00000371100.9	4027	13	0	0	0	0	multi-exon	TRUE	canonical	3	126	junction_1	1958.77148821795	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58852397	True	NA	19	True	AATAAA	-21	NA	58852715	58911192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58855334_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_130689.known	chr20	+	1563	13	FSM	ENSG00000087460.29	ENST00000467321.6	1563	13	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	1976.10878158736	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58888593	True	NA	19	True	AATAAA	-21	NA	58888892	58911192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58889047_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_130691.known	chr20	+	1465	13	FSM	ENSG00000087460.29	ENST00000667293.2	1465	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1984.5167530297	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58888838	False	NA	19	True	AATAAA	-21	NA	58888848	58911192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58888905_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_130692.known	chr20	+	1663	13	FSM	ENSG00000087460.29	ENST00000477931.5	1663	13	0	0	0	0	multi-exon	FALSE	canonical	3	505	junction_1	1883.09252885306	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58888800	False	NA	19	True	AATAAA	-21	NA	58889099	58911192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58889354_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_130694.known	chr20	+	1582	13	FSM	ENSG00000087460.29	ENST00000604005.6	1582	13	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	1968.95443735727	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58881105	True	NA	19	True	AATAAA	-21	NA	58889159	58911192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58889333_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_130698.known	chr20	+	1665	13	FSM	ENSG00000087460.29	ENST00000469431.6	1665	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1984.5167530297	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58881096	True	NA	19	True	AATAAA	-21	NA	58889150	58911192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58889407_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_13070.known	chr1	+	2578	19	FSM	ENSG00000131778.20	ENST00000652346.1	2578	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	212.813167930099	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCTAATGGTTTTATTG	147232578	True	NA	4	True	AATAAA	-6	NA	147242696	147295753	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_147242831_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_130700.known	chr20	+	2313	13	FSM	ENSG00000087460.29	ENST00000683015.1	2313	13	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	1982.87388761027	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGATGGGACTCCCGT	58881826	False	NA	14	True	AATAAA	-16	NA	58889880	58911187	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58890790_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_13071.known	chr1	+	2505	18	FSM	ENSG00000131778.20	ENST00000361293.10	2505	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	218.278971370493	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCTAATGGTTTTATTG	147232562	True	NA	4	True	AATAAA	-6	NA	147242680	147295753	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_147242831_147264428_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_130719.known	chr20	+	1638	13	FSM	ENSG00000087460.29	ENST00000488652.6	1638	13	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	1971.60925529263	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58891953	False	NA	19	True	AATAAA	-21	NA	58891980	58911192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58892210_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_13072.known	chr1	+	2415	18	FSM	ENSG00000131778.20	ENST00000488864.5	2415	18	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	213.611813625593	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTTTTATTGCTTTCTT	147232585	True	NA	11	True	AATAAA	-13	NA	147242703	147295760	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_147242831_147259836_147259919_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_130721.known	chr20	+	1583	13	FSM	ENSG00000087460.29	ENST00000603546.2	1583	13	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	1980.00153444104	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58892302	False	NA	19	True	AATAAA	-21	NA	58892332	58911192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58892507_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_130723.known	chr20	+	2503	12	FSM	ENSG00000087460.29	ENST00000419558.7	2503	12	0	0	0	0	multi-exon	FALSE	canonical	3	1140	junction_2	1865.41719792492	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58837130	True	NA	19	True	AATAAA	-21	NA	58839747	58911192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58840887_58895611_58895685_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_130729.known	chr20	+	1622	12	FSM	ENSG00000087460.29	ENST00000482112.6	1622	12	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	2085.67831881783	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58839224	True	NA	19	True	AATAAA	-21	NA	58841617	58911192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58841876_58895611_58895685_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_13073.known	chr1	+	2358	17	FSM	ENSG00000131778.20	ENST00000369259.4	2358	17	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	157.418977175562	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATTGCTTTCTTTCCCT	147232565	True	NA	16	True	AATAAA	-18	NA	147242683	147295765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_147242831_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_130733.known	chr20	+	3432	12	FSM	ENSG00000087460.29	ENST00000349036.9	3432	12	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	2092.03021326728	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58852947	False	NA	19	True	AATAAA	-21	NA	58853265	58911192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58855334_58895611_58895685_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_130738.known	chr20	+	1534	12	FSM	ENSG00000087460.29	ENST00000480975.5	1534	12	0	0	0	0	multi-exon	FALSE	canonical	3	505	junction_1	2013.02736532659	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAGCAAAGAATGATGGG	58881116	True	NA	6	True	AATAAA	-45	NA	58889170	58911179	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58889354_58895611_58895685_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_13074.nic	chr1	+	2008	17	ISM	ENSG00000131778.20	ENST00000369258.8	2967	23	-49	10354	-19	9161	5prime_fragment	FALSE	canonical	0	0	junction_7	148.215939911165	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAGAAGCAGCTGCCAAG	147232516	True	NA	-16	True	AAGAAA	-2	NA	147242634	147285408	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323
transcript_130742.known	chr20	+	1793	12	FSM	ENSG00000087460.29	ENST00000485673.6	1793	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2318.47548942	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58881069	True	NA	19	True	AATAAA	-21	NA	58889123	58911192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58889550_58895611_58895685_58903527_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_130748.known	chr20	+	1537	12	FSM	ENSG00000087460.29	ENST00000476935.6	1537	12	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	2105.42180850668	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58892006	False	NA	19	True	AATAAA	-21	NA	58892036	58911192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58892210_58895611_58895685_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_130766.known	chr20	+	662	3	FSM	ENSG00000087460.29	ENST00000484504.5	662	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	241.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTATCTCGCGTCTGT	58881172	False	NA	21	True	AATAAA	-23	NA	58889226	58900410	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58889354_58895611_58895685_58899948
transcript_130772.known	chr20	+	1548	12	FSM	ENSG00000087460.29	ENST00000478585.6	1548	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2228.86952037192	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAGCAAAGAATGATGGG	58881105	True	NA	6	True	AATAAA	-45	NA	58889159	58911179	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58889354_58895611_58895685_58903527_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_130773.known	chr20	+	1533	13	FSM	ENSG00000087460.29	ENST00000468895.6	1533	13	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_12	2004.4724922588	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTGCAGCATTAAAAAAAAT	58891559	False	NA	-30	True	AATAAA	-37	NA	58891690	58911143	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58891866_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910684
transcript_130774.known	chr20	-	1156	5	FSM	ENSG00000235590.8	ENST00000424094.6	1156	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	16.8874953737966	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGAGCCTACTGTGGAT	-58848506	True	NA	-6	True	AATAAA	-33	NA	58850903	58818918	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_58819256_58841936_58842230_58842432_58842546_58848878_58848918_58850529
transcript_130775.nic	chr20	+	2143	16	NIC	ENSG00000101158.15	novel	2137	16	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_15	144.413141907361	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGATGTGACATTGTTT	58973615	True	NA	38	True	AGTAAA	-34	NA	58981179	58995133	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_58981370_58986092_58986209_58986753_58986864_58987707_58987818_58988913_58989022_58989487_58989641_58989857_58989989_58990909_58991076_58991311_58991447_58991880_58992021_58992997_58993113_58993448_58993545_58993623_58993676_58994109_58994240_58994641_58994825_58994925
transcript_130777.known	chr20	+	2137	16	FSM	ENSG00000101158.15	ENST00000460601.5	2137	16	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_15	116.332206298266	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGATGTGACATTGTTT	58973710	True	NA	38	True	AGTAAA	-34	NA	58981274	58995133	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58981370_58986092_58986209_58986753_58986864_58987707_58987818_58988913_58989022_58989487_58989641_58989857_58989989_58990909_58991076_58991311_58991447_58991880_58992021_58992997_58993113_58993448_58993545_58993623_58993765_58994109_58994240_58994641_58994825_58994925
transcript_130783.nic	chr20	+	2224	15	NIC	ENSG00000101158.15	novel	2237	15	NA	NA	-28	0	intron_retention	FALSE	canonical	3	110	junction_13	106.180943945431	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCTGGGTTGGATTAA	58973615	True	NA	18	True	AGTAAA	-14	NA	58981179	58995113	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_58981370_58986092_58986209_58986753_58986864_58987707_58987818_58988913_58989022_58989487_58989641_58989857_58989989_58990909_58991076_58991311_58991447_58991880_58992021_58992997_58993113_58993448_58993545_58993623_58993676_58994109_58994240_58994641
transcript_130785.known	chr20	+	2237	15	FSM	ENSG00000101158.15	ENST00000652272.2	2237	15	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_13	48.041064492276	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCTGGGTTGGATTAA	58973691	True	NA	18	True	AGTAAA	-14	NA	58981255	58995113	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_58981370_58986092_58986209_58986753_58986864_58987707_58987818_58988913_58989022_58989487_58989641_58989857_58989989_58990909_58991076_58991311_58991447_58991880_58992021_58992997_58993113_58993448_58993545_58993623_58993765_58994109_58994240_58994641
transcript_130802.nic	chr20	+	2605	14	NIC	ENSG00000101158.15	novel	2237	15	NA	NA	-19	0	intron_retention	FALSE	canonical	3	412	junction_7	42.3054544862709	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCTGGGTTGGATTAA	58973668	True	NA	18	True	AGTAAA	-14	NA	58981232	58995113	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_58981370_58986092_58986209_58986753_58986864_58987707_58987818_58988913_58989022_58989487_58989641_58989857_58989989_58990909_58991076_58991311_58991447_58991880_58992021_58992997_58993113_58993448_58993545_58993623_58994240_58994641
transcript_13083.known	chr1	+	1822	12	FSM	ENSG00000131778.20	ENST00000652587.1	1822	12	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	201.568887799992	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTTGCATAATAATAAATT	147232535	True	NA	-19	True	NA	NA	NA	147242653	147295730	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_147242831_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_130850.known	chr20	-	1502	6	FSM	ENSG00000101160.15	ENST00000217131.6	1502	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2.92574776766556	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGCTGCCCGTGCCTTA	-59005893	True	NA	-5	True	AATAAA	-21	NA	59007254	58995184	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_58995760_58996638_58996802_58997602_58997754_59001464_59001645_59006321_59006486_59006985
transcript_130854.known	chr20	-	2212	5	FSM	ENSG00000101160.15	ENST00000679391.1	2212	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	3.24037034920393	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGAGGGAGGGAGGGAGT	-59005875	True	NA	-78	True	NA	NA	NA	59007236	58995257	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_58995760_58996638_58997754_59001464_59001645_59006321_59006486_59006985
transcript_130857.known	chr20	-	2825	5	FSM	ENSG00000101160.15	ENST00000681175.1	2825	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.03112887414927	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCTGAAGCTTTTGTTATT	-59005849	True	NA	NA	False	AATAAA	-16	NA	59007210	58992116	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_58994222_58997602_58997754_59001464_59001645_59006321_59006486_59006985
transcript_130858.known	chr20	-	3610	3	FSM	ENSG00000124172.10	ENST00000243997.8	3610	3	0	0	0	0	multi-exon	FALSE	canonical	3	4513	junction_2	177.5	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTAGTTTTGCTTGTC	-59011449	True	NA	-7	True	AATAAA	-16	NA	59032335	59025474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_59028842_59030302_59030430_59032219
transcript_130859.known	chr20	-	1878	2	FSM	ENSG00000124172.10	ENST00000395659.1	1878	2	0	0	0	0	multi-exon	FALSE	canonical	3	4513	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAGTTTGTGAGACTTTT	-59011459	True	NA	-5	True	AATAAA	-29	NA	59032345	59028677	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_59030430_59032219
transcript_130860.known	chr20	-	704	6	FSM	ENSG00000101166.16	ENST00000463057.1	704	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	246.32774914735	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTTTTTGA	-59042648	False	NA	-16	True	AATACA	-18	NA	59042732	59034908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_59035127_59036470_59036574_59036689_59036761_59037190_59037300_59038465_59038635_59042698
transcript_130861.nnic	chr20	-	2516	6	NNC	ENSG00000101166.16	novel	2503	6	NA	NA	-18	-2	at_least_one_novel_splicesite	TRUE	canonical	3	13	junction_1	245.932836359848	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTTTCCTGATTATAA	-59035481	True	NA	-6	True	AATAAA	-16	NA	59042827	59033146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_59035127_59036496_59036574_59036689_59036761_59037190_59037281_59038465_59038635_59042698
transcript_130864.known	chr20	-	943	5	FSM	ENSG00000101166.16	ENST00000371033.9	943	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	261.379991583136	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGACGCCCATTGCCCTG	-59035459	True	NA	NA	False	NA	NA	NA	59042805	59034633	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_59035127_59036470_59036574_59036689_59036761_59038465_59038635_59042698
transcript_130870.known	chr20	+	2452	5	FSM	ENSG00000124205.18	ENST00000337938.7	2452	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.433012701892219	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGGTTTTTTTCCTCA	NA	False	NA	NA	False	AATAAA	-21	NA	59300610	59325992	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_59300865_59301409_59301723_59321016_59321194_59322371_59322418_59324330
transcript_130871.known	chr20	+	5086	4	FSM	ENSG00000196227.11	ENST00000360816.8	5086	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	10.6562449087639	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTGGTATTGTTTTGT	59938909	True	NA	23	True	ATTAAA	-23	NA	59940388	59948680	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_59940536_59942197_59942310_59942426_59942513_59943939
transcript_130876.known	chr20	-	2733	4	FSM	ENSG00000277270.2	ENST00000671196.1	2733	4	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	1.4142135623731	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTCTGTCTCCAAAAAAAA	-61437457	False	NA	NA	False	NA	NA	NA	61437477	61432867	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_61434876_61434955_61435152_61435702_61435795_61437040
transcript_130879.known	chr20	-	2505	3	FSM	ENSG00000277270.2	ENST00000654910.1	2505	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGAGACCAGCCTGGCC	-61437517	False	NA	NA	False	NA	NA	NA	61437537	61433063	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_61434876_61434955_61435152_61437040
transcript_130881.known	chr20	-	578	2	FSM	ENSG00000277270.2	ENST00000615619.1	578	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGAGAAGCAGGTACTTGC	-61437347	False	NA	NA	False	NA	NA	NA	61437367	61434624	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_61434876_61437040
transcript_130886.known	chr20	+	2576	9	FSM	ENSG00000149657.20	ENST00000279068.11	2576	9	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_2	4.05431868505671	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTTCTGATGCTCTA	62112781	True	NA	18	True	AATAAA	-18	NA	62122474	62135374	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_62122794_62124616_62124781_62126303_62126440_62129784_62129953_62130218_62130297_62130529_62130692_62131355_62131507_62133289_62133476_62134162
transcript_130889.known	chr20	-	1023	7	FSM	ENSG00000101182.15	ENST00000484488.5	1023	7	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_4	1789.30437290275	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGATGTGTAGGCCTTTCC	-62110954	True	NA	-4	True	TTTAAA	-23	NA	62143440	62136802	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_62136950_62137363_62137427_62138170_62138291_62139074_62139198_62139695_62139906_62140817_62140945_62143207
transcript_130890.known	chr20	-	962	7	FSM	ENSG00000101182.15	ENST00000370873.9	962	7	0	0	0	0	multi-exon	TRUE	canonical	3	4096	junction_4	573.471494980836	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTTTTTTTTTTAAGAG	-62110908	True	NA	-20	True	AATAAA	-16	NA	62143394	62136732	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_62136950_62137363_62137427_62138170_62138291_62139074_62139198_62139780_62139906_62140817_62140945_62143207
transcript_130908.known	chr20	-	925	3	FSM	ENSG00000101182.15	ENST00000370858.3	925	3	0	0	0	0	multi-exon	FALSE	canonical	3	4268	junction_2	9.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTGAACTGCTGATAAC	-62110944	True	NA	NA	False	NA	NA	NA	62143430	62139330	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_62139906_62140817_62140945_62143207
transcript_13091.known	chr1	-	2331	9	FSM	ENSG00000131781.13	ENST00000254090.9	2331	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	3.33307290649335	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTAGGCTCACAGTCAT	-147225214	True	NA	2	True	AATAAA	-15	NA	147225339	147186260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_147187246_147190176_147190250_147201151_147201505_147208851_147209052_147212392_147212536_147213307_147213471_147215753_147215943_147224894_147225067_147225286
transcript_130922.known	chr20	+	4549	11	FSM	ENSG00000184402.15	ENST00000331758.8	4549	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_10	6.36003144646314	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGATTTTGGTGTGATGTG	62142381	True	NA	38	True	TATAAA	-21	NA	62143768	62182514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_62143890_62158671_62158749_62159876_62159962_62161435_62161581_62162751_62162932_62163457_62163623_62164144_62164247_62165421_62165515_62172681_62172802_62174516_62174645_62179181
transcript_130930.nic	chr20	+	3524	8	NIC	ENSG00000101181.18	novel	3747	7	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	1	28	junction_3	21.6163203650031	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTGGTTTTTTTGTATG	62181413	True	NA	16	True	CATAAA	-19	NA	62183010	62203568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_62183058_62193415_62193625_62195801_62195950_62197851_62197968_62198633_62198853_62199118_62199258_62200682_62202844_62203083
transcript_130933.known	chr20	+	3747	7	FSM	ENSG00000101181.18	ENST00000370823.8	3747	7	0	0	0	0	multi-exon	FALSE	canonical	1	28	junction_3	22.9401394939089	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTGGTTTTTTTGTATG	62181430	True	NA	16	True	CATAAA	-19	NA	62183027	62203568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_62183058_62193415_62193625_62195801_62195950_62197851_62197968_62198633_62198853_62199118_62199258_62200682
transcript_130942.nnic	chr20	+	2590	6	NIC	ENSG00000101181.18	novel	3747	7	NA	NA	-17	-164	combination_of_known_splicesites	FALSE	canonical	1	7	junction_1	31.8157193852347	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCAGGCGTGGTGGCGG	62181413	True	NA	NA	False	AATACA	-7	NA	62183010	62202603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_62183058_62195801_62195950_62197851_62197968_62198633_62198853_62199118_62199258_62200682
transcript_130948.known	chr20	-	2692	3	FSM	ENSG00000101180.17	ENST00000340177.10	2692	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	4.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGAGGACTTTGTGGGG	-62219867	True	NA	0	True	AATAAA	-24	NA	62220278	62214959	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_62216927_62218490_62218658_62219720
transcript_130952.known	chr20	+	4030	15	FSM	ENSG00000130703.17	ENST00000643174.1	4030	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	94.8355181891473	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGTGGGCCACGCGTTTG	62233497	True	NA	27	True	AATAAA	-37	NA	62238552	62296203	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_62238598_62256056_62256222_62259980_62260126_62263615_62263692_62271633_62271732_62272124_62272260_62273308_62273407_62279156_62279340_62281057_62281166_62281789_62281880_62284045_62284170_62286582_62286712_62289206_62289331_62291702_62291794_62293784
transcript_130955.known	chr20	+	2683	15	FSM	ENSG00000130703.17	ENST00000643412.1	2683	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	93.5287798116774	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTACAGTGGTGTAATTA	62233508	True	NA	-21	True	NA	NA	NA	62238563	62294851	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_62238598_62242320_62242435_62256056_62256222_62259980_62260126_62263615_62263692_62272124_62272260_62273308_62273407_62279156_62279340_62281057_62281166_62281789_62281880_62284045_62284170_62286582_62286712_62289206_62289331_62291702_62291794_62293784
transcript_130960.known	chr20	+	3343	14	FSM	ENSG00000130703.17	ENST00000642932.1	3343	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	97.3989538599761	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTAAAGTTATTTAACCA	62233486	True	NA	-7	True	NA	NA	NA	62238541	62294865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_62238598_62256056_62256222_62259980_62260126_62263615_62263692_62272124_62272260_62273308_62273407_62279156_62279340_62280008_62280123_62281057_62281880_62284045_62284170_62286582_62286712_62289206_62289331_62291702_62291794_62293784
transcript_130961.known	chr20	+	3944	14	FSM	ENSG00000130703.17	ENST00000313733.9	3944	14	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_12	18.3280429878182	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGAAAGTGATGGCCT	62233465	True	NA	7	True	AATAAA	-17	NA	62238520	62296183	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_62238598_62256056_62256222_62259980_62260126_62263615_62263692_62272124_62272260_62273308_62273407_62279156_62279340_62281057_62281166_62281789_62281880_62284045_62284170_62286582_62286712_62289206_62289331_62291702_62291794_62293784
transcript_130972.known	chr20	+	3886	13	FSM	ENSG00000130703.17	ENST00000439951.6	3886	13	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_11	71.6135462046113	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGCGTTTGGGTGTGAGTA	62233429	True	NA	37	True	NA	NA	NA	62238484	62296213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_62238598_62256056_62256222_62259980_62260126_62263615_62263692_62272124_62272260_62273308_62273407_62279156_62279340_62281057_62281166_62281789_62281880_62284045_62284170_62286582_62286712_62291702_62291794_62293784
transcript_130979.known	chr20	+	2642	14	FSM	ENSG00000130703.17	ENST00000643981.1	2642	14	0	0	0	0	multi-exon	FALSE	canonical	1	14	junction_1	70.0344800963558	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGTTATTTAACCAAAAAT	NA	False	NA	-2	True	NA	NA	NA	62255152	62294870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_62255241_62256056_62256222_62259980_62260126_62263615_62263692_62272124_62272260_62273308_62273407_62279156_62279340_62281057_62281166_62281789_62281880_62284045_62284170_62286582_62286712_62289206_62289331_62291702_62291794_62293784
transcript_1310.nic	chr1	-	3079	11	NIC	ENSG00000008130.15	novel	3235	12	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	187.779791244958	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGGTTAATAACAGCTTT	-1778328	False	NA	NA	False	AATAAA	-20	NA	1778472	1751231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_1753061_1753566_1753650_1754283_1754384_1754543_1754699_1755373_1755477_1756257_1756344_1756502_1756609_1757180_1757311_1761951_1762036_1765227_1765447_1778288
transcript_13101.known	chr1	+	662	6	FSM	ENSG00000131778.20	ENST00000492728.1	662	6	0	0	0	0	multi-exon	FALSE	canonical	3	519	junction_5	23.4571950582332	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACACATGTACAGCTGTCC	147232627	True	NA	NA	False	NA	NA	NA	147242745	147260046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836
transcript_131010.known	chr20	+	1361	9	FSM	ENSG00000130706.13	ENST00000620230.4	1361	9	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_2	732.059594568639	280	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTTAGTTTCTTTGCCC	62302870	False	NA	17	True	AATAAA	-20	NA	62302895	62308860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_62303050_62303567_62303782_62306196_62306321_62306647_62306735_62307370_62307453_62307595_62307829_62308020_62308179_62308367_62308471_62308654
transcript_131011.known	chr20	-	668	1	FSM	ENSG00000273619.1	ENST00000610979.1	668	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACGAAGTATGGTCGTTG	-62386160	True	NA	-3	True	AGTAAA	-18	NA	62386970	62386302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_62386300_62387000
transcript_131013.known	chr20	+	358	6	FSM	ENSG00000171858.18	ENST00000343986.9	358	6	0	0	0	0	multi-exon	FALSE	canonical	3	4434	junction_5	1373.06649511231	2190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCAGGTTCATTCTGT	62260501	True	NA	14	True	AATAAA	-14	NA	62387102	62388520	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_62387137_62387320_62387389_62387610_62387675_62387842_62387915_62388308_62388365_62388456
transcript_131014.known	chr20	+	429	5	FSM	ENSG00000171858.18	ENST00000492356.2	429	5	0	0	0	0	multi-exon	FALSE	canonical	3	5559	junction_1	962.731368295435	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGCAGGTTCATTCTG	62260521	True	NA	13	True	AATAAA	-13	NA	62387122	62388519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_62387137_62387320_62387389_62387610_62387675_62387842_62387915_62388308
transcript_131021.known	chr20	+	418	4	FSM	ENSG00000171858.18	ENST00000450116.6	418	4	0	0	0	0	multi-exon	FALSE	canonical	3	7051	junction_3	412.002427177317	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGCAGGTTCATTCTG	62260716	False	NA	13	True	AATAAA	-13	NA	62387317	62388519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_62387389_62387610_62387675_62387842_62387915_62388308
transcript_131022.known	chr20	-	3785	10	FSM	ENSG00000149679.12	ENST00000279101.10	3783	10	0	-2	0	2	multi-exon	FALSE	canonical	3	75	junction_5	10.4077369131969	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCACAGCTTGTCTCCT	-62406036	True	NA	-6	True	TTTAAA	-41	NA	62407285	62388631	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_62391112_62391248_62391454_62392388_62392496_62392919_62393024_62393439_62393606_62394156_62394266_62394936_62395015_62396314_62396408_62396520_62396593_62406914
transcript_131023.known	chr20	-	2799	14	FSM	ENSG00000130701.4	ENST00000252998.2	2799	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.69230769230769	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTCTGGCAGGGCCCC	-62427421	True	NA	-8	True	AATAAA	-17	NA	62427539	62410236	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_62410997_62412623_62412754_62412829_62412901_62413400_62413546_62413820_62414557_62415120_62415288_62415577_62415661_62415787_62415946_62416163_62416237_62416759_62416873_62417223_62417320_62418422_62418466_62419586_62419731_62427459
transcript_131026.known	chr20	-	2620	7	FSM	ENSG00000130700.7	ENST00000252997.3	2620	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	4.7169905660283	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCACTCTCCCTTCCCCCGC	-62475817	True	NA	1	True	AATAAA	-14	NA	62475995	62463496	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_62464992_62465339_62465465_62465833_62465922_62466425_62466552_62473402_62473579_62474998_62475543_62475929
transcript_131031.nic	chr20	-	1958	2	ISM	ENSG00000130700.7	ENST00000252997.3	2620	7	-75	10229	-75	-10229	5prime_fragment	FALSE	canonical	3	9	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATCTAAGGCACAAGATT	NA	False	NA	-17	True	AATAAA	-14	NA	62476070	62473725	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_62475543_62475929
transcript_131034.known	chr20	+	2716	12	FSM	ENSG00000101187.16	ENST00000217159.6	2716	12	0	0	0	0	multi-exon	TRUE	canonical	3	118	junction_11	16.1828396000412	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCCCCGTACCGCGTGCTT	62639808	True	NA	15	True	AATATA	-19	NA	62642502	62672293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_62642554_62656358_62657251_62658676_62658768_62660411_62660534_62661063_62661176_62664933_62665089_62666379_62666576_62667744_62667911_62668011_62668185_62668476_62668542_62668929_62669079_62671749
transcript_131053.nnic	chr20	+	2400	8	NNC	ENSG00000060491.17	novel	2410	7	NA	NA	-50	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	49.3988349858494	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGGTATGGACCGGGG	62801210	True	NA	19	True	AATAAA	-16	NA	62804784	62814000	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_62805031_62807536_62807606_62808246_62808326_62809584_62809664_62810498_62810566_62811461_62811611_62812229_62813195_62813254
transcript_131055.nnic	chr20	+	2400	8	NNC	ENSG00000060491.17	novel	2410	7	NA	NA	-50	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	49.3988349858494	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGGTATGGACCGGGG	62801210	True	NA	19	True	AATAAA	-16	NA	62804784	62814000	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_+_62805031_62807536_62807606_62808246_62808326_62809584_62809664_62810498_62810566_62811461_62811611_62812229_62813258_62813317
transcript_131056.known	chr20	+	2410	7	FSM	ENSG00000060491.17	ENST00000290291.10	2410	7	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	10.9455724179028	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGGTATGGACCGGGG	62801260	True	NA	19	True	AATAAA	-16	NA	62804834	62814000	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_62805031_62807536_62807606_62808246_62808326_62809584_62809664_62810498_62810566_62811461_62811611_62812229
transcript_131057.known	chr20	+	2752	5	FSM	ENSG00000101189.7	ENST00000370487.5	2752	5	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_4	22.0963797939844	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGTAACATTTTGCTGC	62792825	True	NA	3	True	AATAAA	-16	NA	62796472	62801729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_62796672_62797109_62797232_62798586_62798669_62798974_62799050_62799455
transcript_13106.known	chr1	+	1571	2	FSM	ENSG00000180867.11	ENST00000440377.2	1571	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCAGCATACTAATTCCC	147172281	True	NA	NA	False	TATAAA	-19	NA	147172770	147175205	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_147173560_147174423
transcript_131079.nic	chr20	+	2980	32	NIC	ENSG00000092758.18	novel	838	14	NA	NA	-571	-54	combination_of_known_junctions	TRUE	canonical	3	74	junction_1	69.1244635944587	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATTAATGACTGGCTAC	62815661	False	NA	10	True	AATAAA	-17	NA	62815672	62841090	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_62816318_62817566_62817636_62818517_62818554_62819221_62819294_62819928_62819983_62821180_62821217_62821506_62821531_62821756_62821811_62822110_62822165_62822590_62822633_62824444_62824502_62824967_62825022_62825816_62825871_62826203_62826258_62826766_62826821_62827240_62827295_62827922_62827977_62828763_62828818_62828922_62828977_62829454_62829500_62829627_62829682_62829765_62829820_62830359_62830414_62830516_62830589_62832153_62832190_62833019_62833065_62835920_62835954_62836186_62836334_62836477_62836533_62837082_62837266_62838683_62838762_62840541
transcript_13108.known	chr1	+	3021	24	FSM	ENSG00000131778.20	ENST00000651231.1	3021	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	217.645251674737	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCTGTTCCTAATGGT	147232610	True	NA	-3	True	NA	NA	NA	147242728	147295746	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147293924_147294015_147294383_147294518_147295430
transcript_131080.nic	chr20	+	2665	32	NIC	ENSG00000092758.18	novel	838	14	NA	NA	-187	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_1	69.1244635944587	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGGTCTAGTCTGATGTT	62816045	False	NA	16	True	AATAAA	-32	NA	62816056	62841159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_62816318_62817566_62817636_62818517_62818554_62819221_62819294_62819928_62819983_62821180_62821217_62821506_62821531_62821756_62821811_62822110_62822165_62822590_62822633_62824444_62824502_62824967_62825022_62825816_62825871_62826203_62826258_62826766_62826821_62827240_62827295_62827922_62827977_62828763_62828818_62828922_62828977_62829454_62829500_62829627_62829682_62829765_62829820_62830359_62830414_62830516_62830589_62832153_62832190_62833019_62833065_62835920_62835954_62836186_62836334_62836477_62836533_62837082_62837266_62838683_62838762_62840541
transcript_131102.known	chr20	+	2497	32	FSM	ENSG00000092758.18	ENST00000649368.1	2497	32	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_1	51.1795923819131	1384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGGTCTAGTCTGATGTT	62812134	True	NA	16	True	AATAAA	-32	NA	62817049	62841159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_62817143_62817566_62817636_62818517_62818554_62819221_62819294_62819928_62819983_62821180_62821217_62821506_62821531_62821756_62821811_62822110_62822165_62822590_62822633_62824444_62824502_62824967_62825022_62825816_62825871_62826203_62826258_62826766_62826821_62827240_62827295_62827922_62827977_62828763_62828818_62828922_62828977_62829454_62829500_62829627_62829682_62829765_62829820_62830359_62830414_62830516_62830589_62832153_62832190_62833019_62833065_62835920_62835954_62836186_62836334_62836477_62836533_62837082_62837266_62838683_62838762_62840541
transcript_13112.known	chr1	+	6189	10	FSM	ENSG00000116128.12	ENST00000234739.8	6189	10	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	30.5505046330389	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAACTGCCTTTTTTGTTC	147539730	True	NA	21	True	AATAAA	-21	NA	147541500	147626216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_147541675_147604776_147604912_147606783_147606867_147611577_147611890_147612882_147613200_147614426_147614617_147615802_147615903_147618815_147621058_147622270_147622532_147623841
transcript_13115.nic	chr1	+	6232	10	NIC	ENSG00000116128.12	novel	5639	8	NA	NA	-75	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_1	28.4322890694435	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAACTGCCTTTTTTGTTC	147597808	True	NA	21	True	AATAAA	-21	NA	147600120	147626216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_147600338_147604776_147604912_147606783_147606867_147611577_147611890_147612882_147613200_147614426_147614617_147615802_147615903_147618815_147621058_147622270_147622532_147623841
transcript_131183.known	chr20	-	8574	16	FSM	ENSG00000101191.17	ENST00000266070.8	8574	16	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_8	84.8347413111712	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCGGGTCTTCATCAGC	-62932877	True	NA	-4	True	AATAAA	-18	NA	62937952	62877737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_62882415_62890959_62891156_62891986_62892077_62892808_62892963_62893665_62894195_62894412_62894549_62894809_62894915_62895048_62895166_62896232_62896393_62896530_62896997_62905886_62906101_62907146_62907360_62909698_62910021_62910773_62911615_62914209_62914407_62937795
transcript_13120.nic	chr1	+	4672	9	NIC	ENSG00000116128.12	novel	5639	8	NA	NA	-75	-2834	combination_of_known_junctions	FALSE	canonical	3	69	junction_1	28.3008392101718	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCGTGGAATCTCGAGT	147597808	True	NA	4	True	ATTAAA	-15	NA	147600120	147623346	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_147600338_147604776_147604912_147606783_147606867_147611577_147611890_147612882_147613200_147614426_147614617_147615802_147615903_147618815_147621058_147622270
transcript_131208.known	chr20	-	2707	6	FSM	ENSG00000101191.17	ENST00000354665.8	2707	6	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_5	71.5524982093567	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTAATGCCTTCTGTCTA	-62924357	True	NA	-14	True	TATAAA	-17	NA	62926469	62905004	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_62906101_62907146_62907360_62909698_62910021_62910773_62911615_62914209_62914407_62926431
transcript_131209.nnic	chr20	-	3039	6	NNC	ENSG00000101191.17	novel	2707	6	NA	NA	-504	0	intron_retention	FALSE	canonical	3	20	junction_5	104.661358676448	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTAATGCCTTCTGTCTA	-62926899	False	NA	-14	True	TATAAA	-17	NA	62927009	62905004	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_62906101_62907146_62907360_62909698_62910021_62910773_62911615_62914209_62914407_62926639
transcript_131214.known	chr20	-	2833	6	FSM	ENSG00000101191.17	ENST00000370371.8	2833	6	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_5	77.6273147803014	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTCTGTCTATAGTGCA	-62932877	True	NA	-7	True	TATAAA	-24	NA	62937952	62904997	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_62906101_62907146_62907360_62909698_62910021_62910773_62911615_62914209_62914407_62937795
transcript_131240.known	chr20	+	4369	5	FSM	ENSG00000101193.8	ENST00000266069.5	4369	5	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_3	10.0840220150494	192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTATCTGGAAGCTCTCT	62932523	True	NA	17	True	AGTAAA	-23	NA	62938146	62948475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_62938254_62941490_62941621_62942986_62943184_62943494_62943693_62944738
transcript_131255.known	chr20	+	2594	14	FSM	ENSG00000101194.18	ENST00000370349.7	2594	14	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	66.1879160926403	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGTTATTTTATTTAACA	62950700	True	NA	5	True	ATTAAA	-15	NA	62952706	62968597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_62952890_62953210_62953273_62956764_62956963_62957440_62957581_62960503_62960604_62962623_62962755_62963272_62963370_62963583_62963681_62964227_62964316_62965131_62965167_62965609_62965726_62966524_62966581_62966702_62966733_62967336
transcript_131259.nic	chr20	+	2583	13	NIC	ENSG00000101194.18	novel	2594	14	NA	NA	-71	0	combination_of_known_junctions	TRUE	canonical	3	17	junction_5	54.2854466889812	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGTTATTTTATTTAACA	62950629	True	NA	5	True	ATTAAA	-15	NA	62952635	62968597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_62952890_62956764_62956963_62957440_62957581_62960503_62960604_62962623_62962735_62963272_62963370_62963583_62963681_62964227_62964316_62965131_62965167_62965609_62965726_62966524_62966581_62966702_62966733_62967336
transcript_13126.nic	chr1	+	3904	8	NIC	ENSG00000116128.12	novel	5639	8	NA	NA	-75	-4815	combination_of_known_junctions	FALSE	canonical	3	69	junction_1	27.5858585481173	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGAATGTGGCTTCTTTA	147597808	True	NA	5	True	AATAAA	-14	NA	147600120	147621365	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_147600338_147604776_147604912_147606783_147606867_147611577_147611890_147612882_147613200_147614426_147614617_147615802_147615903_147618815
transcript_131261.known	chr20	+	3518	13	FSM	ENSG00000101194.18	ENST00000370351.9	3518	13	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_5	28.9581834528495	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTTTTGTGTATCTGT	62950702	True	NA	5	True	AATAAA	-16	NA	62952708	62969585	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_62952890_62956764_62956963_62957440_62957581_62960503_62960604_62962623_62962755_62963272_62963370_62963583_62963681_62964227_62964316_62965131_62965167_62965609_62965726_62966524_62966581_62966702_62966733_62967336
transcript_131274.nic	chr20	+	3207	12	ISM	ENSG00000101194.18	ENST00000370351.9	3518	13	-73	988	-71	0	intron_retention	FALSE	canonical	3	127	junction_5	29.8951335214356	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGTTATTTTATTTAACA	62950629	True	NA	5	True	ATTAAA	-15	NA	62952635	62968597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_62952890_62956764_62956963_62957440_62957581_62960503_62960604_62962623_62962755_62963272_62963370_62963583_62963681_62964227_62964316_62965131_62965167_62965609_62965726_62966524_62966581_62966702
transcript_131276.nic	chr20	+	3121	12	NIC	ENSG00000101194.18	novel	2594	14	NA	NA	-71	0	intron_retention	FALSE	canonical	3	169	junction_4	22.3865366859947	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGTTATTTTATTTAACA	62950629	True	NA	5	True	ATTAAA	-15	NA	62952635	62968597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_62952890_62956764_62956963_62957440_62957581_62960503_62960604_62962623_62963370_62963583_62963681_62964227_62964316_62965131_62965167_62965609_62965726_62966524_62966581_62966702_62966733_62967336
transcript_13130.nnic	chr1	-	3046	10	NIC	ENSG00000162836.12	novel	4564	8	NA	NA	-19	-6	intron_retention	FALSE	canonical	3	28	junction_1	41.0684463298847	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGATTCCATGACTTTTC	NA	False	NA	-9	True	ATTAAA	-15	NA	147670543	147629657	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_147631066_147648245_147648412_147650142_147650239_147652448_147652550_147654193_147654327_147655160_147655249_147658959_147659040_147659395_147659527_147659646_147659776_147669829
transcript_131301.known	chr20	-	3198	5	FSM	ENSG00000149658.18	ENST00000370339.8	3198	5	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_4	15.2643375224737	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGTCACCTCATTCTT	-63209701	True	NA	-3	True	AATAAA	-18	NA	63216131	63195428	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63196735_63202286_63203808_63213863_63213944_63215576_63215602_63215865
transcript_131303.known	chr20	-	747	4	FSM	ENSG00000149658.18	ENST00000370334.4	747	4	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	172.186591296251	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATCCCTTTATTGCTTTT	-63209709	True	NA	NA	False	NA	NA	NA	63216139	63196366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63196735_63213863_63213944_63215576_63215602_63215865
transcript_131304.known	chr20	-	1353	7	FSM	ENSG00000101198.15	ENST00000370316.8	1353	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	12.8894875339902	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACTCTGTGGAAGATGCC	-63254170	True	NA	-5	True	AATAAA	-18	NA	63254463	63240783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63241507_63242538_63242624_63244023_63244085_63247577_63247776_63248814_63248896_63249934_63250073_63254396
transcript_131312.known	chr20	-	1421	6	FSM	ENSG00000101198.15	ENST00000370313.5	1421	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	30.958036113423	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACTCTGTGGAAGATGCC	-63253415	False	NA	-5	True	AATAAA	-18	NA	63253437	63240783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63241507_63244023_63244085_63247577_63247776_63248814_63248896_63249934_63250073_63253217
transcript_131313.nic	chr20	-	861	6	NIC	ENSG00000101198.15	novel	1353	7	NA	NA	-50	36	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	20.9380037252838	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAAAACCCCACATGCCCA	-63254220	True	NA	NA	False	AAAAAG	-24	NA	63254513	63241240	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_63241507_63244023_63244085_63247577_63247776_63248814_63248896_63249934_63250073_63254396
transcript_13133.known	chr1	-	6956	10	FSM	ENSG00000162836.12	ENST00000583509.7	6956	10	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	19.3620476419435	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCTGTTGGCACCCAGG	-147669277	True	NA	NA	False	AATAAA	-23	NA	147670524	147642229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_147647567_147648245_147648412_147650142_147650239_147652448_147652550_147654193_147654327_147655160_147655249_147658959_147659040_147659395_147659527_147659646_147659776_147669829
transcript_131335.nic	chr20	+	3095	14	NIC	ENSG00000101199.13	novel	3467	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	133	junction_13	74.7942345023525	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAATGTCTGGATGCATCC	NA	False	NA	16	True	AATAAA	-16	NA	63272784	63289788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_63272921_63275576_63275641_63276090_63276201_63276479_63276652_63277204_63277306_63278116_63278204_63278898_63278996_63281290_63281348_63282818_63282852_63284865_63284923_63285653_63285714_63286365_63286443_63287563_63289497_63289677
transcript_131342.known	chr20	+	3250	13	FSM	ENSG00000101199.13	ENST00000370283.9	3250	13	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_11	41.709311510341	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTCTGGATGCATCCCA	63265286	True	NA	18	True	AATAAA	-18	NA	63272812	63289790	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63272921_63275576_63275641_63276090_63276201_63276479_63276652_63277204_63277306_63278116_63278204_63278898_63278996_63281290_63281348_63282818_63282852_63284865_63284923_63285653_63285714_63286365_63286443_63287563
transcript_13135.nic	chr1	-	1792	10	NIC	ENSG00000162836.12	novel	6956	10	NA	NA	-19	0	intron_retention	FALSE	canonical	3	21	junction_3	55.4084719644216	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGCTTTGTGTGTTTG	NA	False	NA	-3	True	AATAAA	-17	NA	147670543	147647367	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_147647567_147648245_147648412_147650142_147650239_147652591_147652648_147654193_147654327_147655160_147655249_147658959_147659040_147659395_147659527_147659646_147659776_147669829
transcript_131352.known	chr20	+	1327	13	FSM	ENSG00000101199.13	ENST00000547204.5	1327	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	175.381231575357	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCCTCCTTCCATTTGA	63265270	True	NA	NA	False	NA	NA	NA	63272796	63287937	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63272921_63275576_63275641_63276479_63276652_63277204_63277306_63278116_63278204_63278898_63278996_63281290_63281348_63282818_63282852_63283850_63283881_63284865_63284923_63285653_63285714_63286371_63286443_63287563
transcript_131358.nnic	chr20	+	3245	12	NIC	ENSG00000101199.13	novel	3250	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	16	junction_8	111.395505644016	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTCTGGATGCATCCCA	NA	False	NA	18	True	AATAAA	-18	NA	63272784	63289790	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_63272921_63275576_63275641_63276090_63276201_63276479_63276652_63277204_63277306_63278116_63278204_63278898_63278996_63281290_63281348_63284865_63284923_63285653_63285714_63286365_63286443_63287563
transcript_131363.known	chr20	+	1548	12	FSM	ENSG00000101199.13	ENST00000520485.5	1548	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	112.554119214119	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGCGGCCAGTTCACTAC	63265289	True	NA	NA	False	NA	NA	NA	63272815	63288192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63272921_63275576_63275641_63276090_63276201_63276479_63276652_63278116_63278204_63278898_63278996_63281290_63281348_63282818_63282852_63284865_63284923_63285653_63285714_63286365_63286443_63287563
transcript_131385.known	chr20	-	2775	15	FSM	ENSG00000075043.20	ENST00000360480.7	2775	15	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	416.379095321089	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGAGGGCTGGGCAGGGC	-63466225	False	NA	NA	False	GGGGCT	-41	NA	63472505	63406445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63407376_63408412_63408537_63413449_63413582_63414087_63414194_63414902_63415127_63424176_63424207_63428366_63428436_63433808_63433904_63438624_63438721_63439597_63439709_63442405_63442532_63444658_63444835_63445237_63445365_63446746_63446838_63472167
transcript_131386.nic	chr20	-	2113	14	ISM	ENSG00000075043.20	ENST00000626839.2	9213	16	-16	13066	-16	0	5prime_fragment	FALSE	canonical	0	0	junction_5	417.343770152625	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTCTCTCCCATCTCT	-63466413	True	NA	-1	True	NA	NA	NA	63472693	63413275	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_-_63413582_63414087_63414194_63414902_63415127_63424176_63424207_63428366_63428436_63431339_63431370_63433808_63433904_63438624_63438721_63439597_63439709_63442405_63442532_63444658_63444835_63445237_63445365_63446746_63446838_63472167
transcript_13139.nic	chr1	-	2516	9	NIC	ENSG00000162836.12	novel	6956	10	NA	NA	-19	0	intron_retention	FALSE	canonical	3	127	junction_8	16.7551298114936	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGCTTTGTGTGTTTG	NA	False	NA	-3	True	AATAAA	-17	NA	147670543	147647367	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_147648412_147650142_147650239_147652448_147652550_147654193_147654327_147655160_147655249_147658959_147659040_147659395_147659527_147659646_147659776_147669829
transcript_131395.known	chr20	-	1441	8	FSM	ENSG00000075043.20	ENST00000344425.8	1441	8	0	0	0	0	multi-exon	FALSE	canonical	3	760	junction_4	81.8096346803395	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTGTGTGGTTTATTT	-63466375	True	NA	81	True	TTTAAA	-20	NA	63472655	63433677	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63433904_63438624_63438721_63439597_63439709_63442405_63442532_63444658_63444835_63445237_63445365_63446746_63446838_63472167
transcript_131401.nnic	chr20	-	1350	7	NIC	ENSG00000075043.20	novel	1441	8	NA	NA	-16	0	combination_of_known_splicesites	TRUE	canonical	3	57	junction_3	310.097296559214	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTTCTGTGTGTGGTTTA	-63466413	True	NA	78	True	TTTAAA	-17	NA	63472693	63433680	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_63433904_63438624_63438721_63439597_63439709_63444658_63444835_63445237_63445365_63446746_63446838_63472167
transcript_131408.known	chr20	+	827	4	FSM	ENSG00000125534.10	ENST00000370179.8	827	4	0	0	0	0	multi-exon	FALSE	canonical	3	961	junction_1	45.0653845971483	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGTGAGAAATGGCT	63505971	True	NA	13	True	NA	NA	NA	63520764	63522206	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63520895_63521283_63521364_63521511_63521590_63521667
transcript_131409.known	chr20	+	478	3	FSM	ENSG00000125534.10	ENST00000473620.1	478	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	506	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACTCCGCATCCCTCGCC	63505983	True	NA	NA	False	NA	NA	NA	63520776	63521949	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63520895_63521511_63521590_63521667
transcript_13141.nic	chr1	-	2471	9	NIC	ENSG00000162836.12	novel	4564	8	NA	NA	-19	0	intron_retention	FALSE	canonical	3	21	junction_2	58.7280544118397	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGCTTTGTGTGTTTG	NA	False	NA	-3	True	AATAAA	-17	NA	147670543	147647367	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_147648412_147650142_147650239_147652591_147652648_147654193_147654327_147655160_147655249_147658959_147659040_147659395_147659527_147659646_147659776_147669829
transcript_131410.known	chr20	-	4082	8	FSM	ENSG00000125508.4	ENST00000217188.2	4082	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAGGGACTTTCCTTACC	-63547704	True	NA	NA	False	AATAAA	-21	NA	63547749	63538488	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63541000_63541190_63541348_63541438_63541621_63542162_63542322_63542439_63542582_63543313_63543481_63544226_63544349_63547107
transcript_131411.known	chr20	+	2954	1	FSM	ENSG00000125531.7	ENST00000615526.1	2954	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATATGGAATTAAAGAAGC	63553650	True	NA	4	True	AATAAA	-16	NA	63553714	63556668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63553700_63556700
transcript_131412.known	chr20	-	7827	14	FSM	ENSG00000130589.16	ENST00000427522.6	7827	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.20157687321641	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGGTGTTTGAGGTCT	-63566901	False	NA	-4	True	GATAAA	-23	NA	63568074	63558085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63559371_63559927_63560096_63560170_63560328_63560478_63560698_63560794_63560930_63561081_63561275_63561349_63561467_63561600_63561746_63561822_63561985_63562071_63562204_63562287_63562383_63562519_63566232_63566377_63566454_63566843
transcript_131413.known	chr20	-	1827	4	FSM	ENSG00000130589.16	ENST00000370082.1	1827	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	0.816496580927726	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-63573066	True	NA	NA	False	NA	NA	NA	63574239	63570138	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63570612_63570684_63570869_63572107_63573222_63574183
transcript_131414.known	chr20	-	3079	3	FSM	ENSG00000130589.16	ENST00000479540.5	3079	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATTAGCCAGGC	-63573066	True	NA	NA	False	NA	NA	NA	63574239	63570125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63570612_63570684_63573222_63574183
transcript_131416.known	chr20	-	4280	10	FSM	ENSG00000101216.11	ENST00000370077.2	4280	10	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	7.05183629005441	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGAGTGTCTATCTCTTG	-63625923	True	NA	-12	True	AATAAA	-14	NA	63627101	63587604	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63590730_63592021_63592145_63592532_63592671_63593010_63593083_63595609_63595768_63597756_63597861_63602964_63603093_63604742_63604841_63619266_63619455_63626955
transcript_131418.known	chr20	+	801	2	FSM	ENSG00000232442.2	ENST00000449500.2	826	2	25	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGAGTGCTGAGGGGGGC	63626819	True	NA	5	True	AATAAA	-16	NA	63627226	63628824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63627393_63628189
transcript_13142.known	chr1	-	4564	8	FSM	ENSG00000162836.12	ENST00000613673.4	4564	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	48.5142520612369	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGCTTTGTGTGTTTG	-147669036	False	NA	-3	True	AATAAA	-17	NA	147670283	147647367	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_147648412_147650142_147652648_147654193_147654327_147655160_147655249_147658959_147659040_147659395_147659527_147659646_147659776_147669829
transcript_131421.nnic	chr20	-	2157	3	NNC	ENSG00000197457.10	novel	2248	5	NA	NA	9715	0	at_least_one_novel_splicesite	FALSE	canonical	3	171	junction_2	54	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTGAACTGTCTGTGT	-63642663	False	NA	-15	True	AATAAA	-18	NA	63642679	63639711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_63641398_63642107_63642300_63642400
transcript_131422.nnic	chr20	-	2037	3	NNC	ENSG00000197457.10	novel	2248	5	NA	NA	9647	0	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_2	105.5	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTGAACTGTCTGTGT	-63642731	False	NA	-15	True	AATAAA	-18	NA	63642747	63639711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_63641398_63642107_63642300_63642588
transcript_131424.known	chr20	-	2248	5	FSM	ENSG00000197457.10	ENST00000370053.3	2248	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	101.801277005743	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTGAACTGTCTGTGT	-63650556	True	NA	-15	True	AATAAA	-18	NA	63653424	63639711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63641398_63642107_63642300_63643755_63643932_63644213_63644310_63653326
transcript_131429.known	chr20	+	4955	35	FSM	ENSG00000258366.11	ENST00000370018.7	4955	35	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_32	32.4698422761714	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCGTGGCCTGGGCTTGG	63657761	False	NA	16	True	AATAAA	-26	NA	63657809	63696253	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63658467_63659232_63659505_63661297_63661497_63661849_63661944_63662545_63662628_63662828_63662890_63666003_63666080_63667468_63667554_63672555_63672622_63673939_63674094_63678144_63678184_63678267_63678347_63679848_63679947_63680663_63680720_63685522_63685598_63685790_63685873_63687637_63687771_63687936_63688051_63688138_63688180_63688300_63688387_63688527_63688606_63689054_63689133_63689501_63689649_63689749_63689866_63690086_63690211_63690293_63690442_63690804_63690948_63691741_63691838_63692804_63693004_63693142_63693284_63694371_63694489_63694740_63694975_63695065_63695222_63695327_63695481_63695777
transcript_131430.known	chr20	+	4615	35	FSM	ENSG00000258366.11	ENST00000360203.11	4615	35	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_32	29.0504274605407	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACGGTGTCTTCGTGGCCT	63656281	True	NA	8	True	AATAAA	-18	NA	63658311	63696245	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63658467_63659232_63659505_63661297_63661497_63661849_63661944_63662545_63662628_63662828_63662890_63666003_63666080_63667468_63667554_63672555_63672622_63673939_63674094_63678144_63678184_63678267_63678347_63679848_63679947_63680663_63680720_63685522_63685598_63685790_63685873_63687637_63687771_63687936_63688051_63688138_63688180_63688300_63688387_63688527_63688606_63689054_63689133_63689501_63689649_63689749_63689866_63690086_63690211_63690293_63690442_63690804_63690948_63691741_63691838_63692804_63693004_63693142_63693284_63694371_63694489_63694740_63694975_63695065_63695222_63695327_63695651_63695777
transcript_131465.known	chr20	-	2518	8	FSM	ENSG00000101246.20	ENST00000622789.5	2518	8	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_7	57.5052792607526	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCATTTCTTCTATTTAAA	-63704630	True	NA	NA	False	TATAAA	-17	NA	63707976	63698646	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63700531_63700601_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707098_63707866
transcript_131467.known	chr20	-	1623	8	FSM	ENSG00000101246.20	ENST00000618838.4	1623	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_7	64.9565003581282	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGTGTTACTGGGCTGC	-63704492	True	NA	-2	True	NA	NA	NA	63707838	63699455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63700531_63700601_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707093_63707809
transcript_131468.nic	chr20	-	1716	8	NIC	ENSG00000101246.20	novel	1623	8	NA	NA	8	0	intron_retention	FALSE	canonical	3	112	junction_7	42.954175867892	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGTGTTACTGGGCTGC	-63704642	True	NA	-2	True	NA	NA	NA	63707988	63699455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_63700531_63700601_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707093_63707866
transcript_13147.known	chr1	-	891	2	FSM	ENSG00000265107.3	ENST00000430508.1	891	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCTGTGGGCATAGTCC	-147773335	False	NA	NA	False	NA	NA	NA	147773354	147758483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_147759272_147773251
transcript_131473.known	chr20	-	2456	8	FSM	ENSG00000101246.20	ENST00000619493.4	2456	8	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_7	72.5354241395336	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTCTTCTATTTAAAAAAA	-63704507	True	NA	NA	False	TATAAA	-21	NA	63707853	63698642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63700531_63700601_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707098_63707809
transcript_131481.nic	chr20	+	1839	7	NIC	ENSG00000197114.12	novel	1867	7	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	28	junction_4	86.6649038282254	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTGGAGATCAGCTGG	63705409	True	NA	20	True	ATTAAA	-20	NA	63708038	63736141	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_63708119_63708552_63709165_63733218_63733353_63733586_63733713_63734704_63734825_63735158_63735565_63735780
transcript_131482.nic	chr20	+	1926	7	NIC	ENSG00000197114.12	novel	1945	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	19	junction_4	89.2331527827833	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTGGAGATCAGCTGG	63705409	True	NA	20	True	ATTAAA	-20	NA	63708038	63736141	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_63708119_63708552_63709165_63733218_63733353_63733586_63733740_63734644_63734825_63735158_63735565_63735780
transcript_131483.known	chr20	+	1867	7	FSM	ENSG00000197114.12	ENST00000355969.11	1867	7	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	57.3323643328967	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGGAGATCAGCTGGC	63705409	True	NA	21	True	ATTAAA	-21	NA	63708038	63736142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63708119_63708552_63709165_63733218_63733353_63733586_63733740_63734704_63734825_63735158_63735565_63735780
transcript_131491.known	chr20	+	1896	7	FSM	ENSG00000197114.12	ENST00000357119.8	1896	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	90.2140971984608	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGGAGATCAGCTGGC	63705423	True	NA	21	True	ATTAAA	-21	NA	63708052	63736142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63708189_63708552_63709165_63733218_63733353_63733586_63733713_63734704_63734825_63735158_63735565_63735780
transcript_131492.known	chr20	+	1945	7	FSM	ENSG00000197114.12	ENST00000328969.5	1945	7	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_4	92.6300887041211	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTGGAGATCAGCTGG	63705460	True	NA	20	True	ATTAAA	-20	NA	63708089	63736141	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63708189_63708552_63709165_63733218_63733353_63733586_63733740_63734644_63734825_63735158_63735565_63735780
transcript_131493.known	chr20	+	1890	7	FSM	ENSG00000197114.12	ENST00000369967.7	1890	7	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	63.894878946247	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGGAGATCAGCTGGC	63705456	True	NA	21	True	ATTAAA	-21	NA	63708085	63736142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63708189_63708552_63709165_63733218_63733353_63733586_63733740_63734704_63734825_63735158_63735565_63735780
transcript_131500.nic	chr20	+	1695	7	ISM	ENSG00000125520.14	ENST00000266077.5	2361	8	459	545	-8	0	3prime_fragment	FALSE	canonical	3	152	junction_1	22.1484887871736	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTCTGCCTCTCGGGA	63740213	False	NA	21	True	ATTAAA	-21	NA	63740234	63743505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_63740532_63741369_63741480_63741868_63742057_63742129_63742231_63742335_63742616_63742698_63742791_63742878
transcript_131503.known	chr20	-	1698	7	FSM	ENSG00000101246.20	ENST00000612157.4	1698	7	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_6	62.0360558241916	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCCTGGCTGTTGGACAC	-63704570	True	NA	-8	True	NA	NA	NA	63707916	63699477	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707098_63707866
transcript_131504.known	chr20	-	1612	7	FSM	ENSG00000101246.20	ENST00000618568.4	1612	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	85.1971569687367	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTCCTGGAGGGTGGAG	-63704650	True	NA	-27	True	AATAAA	-28	NA	63707996	63699496	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63700531_63700601_63700703_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707093_63707866
transcript_131512.known	chr20	+	2831	6	FSM	ENSG00000197114.12	ENST00000477340.5	2831	6	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	61.9561134997992	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTGGAGATCAGCTGG	63705409	True	NA	20	True	ATTAAA	-20	NA	63708038	63736141	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63708119_63708552_63709165_63733218_63733353_63733586_63734825_63735158_63735565_63735780
transcript_131521.nic	chr20	+	1800	6	NIC	ENSG00000125520.14	novel	2361	8	NA	NA	-8	0	intron_retention	FALSE	canonical	3	152	junction_1	24.2602555633695	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTCTGCCTCTCGGGA	63740213	False	NA	21	True	ATTAAA	-21	NA	63740234	63743505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_63740532_63741369_63741480_63741868_63742057_63742129_63742616_63742698_63742791_63742878
transcript_131526.nic	chr20	+	2533	6	NIC	ENSG00000125520.14	novel	2361	8	NA	NA	-8	0	intron_retention	FALSE	canonical	3	191	junction_1	10.8148046676766	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTCTGCCTCTCGGGA	63740213	False	NA	21	True	ATTAAA	-21	NA	63740234	63743505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_63741480_63741868_63742057_63742129_63742231_63742335_63742616_63742698_63742791_63742878
transcript_131541.nic	chr20	+	2638	5	NIC	ENSG00000125520.14	novel	2361	8	NA	NA	-8	0	intron_retention	FALSE	canonical	3	191	junction_1	11.1887220003001	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTCTGCCTCTCGGGA	63740213	False	NA	21	True	ATTAAA	-21	NA	63740234	63743505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_63741480_63741868_63742057_63742129_63742616_63742698_63742791_63742878
transcript_131543.known	chr20	-	5231	5	FSM	ENSG00000130584.12	ENST00000245663.9	5231	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_4	8.66025403784439	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGATGCCTCCTGCGTCTC	-63830275	True	NA	-9	True	AATAAA	-20	NA	63831264	63743669	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63747302_63752685_63752862_63775677_63775963_63789820_63790791_63831096
transcript_13155.known	chr1	+	1954	14	FSM	ENSG00000188092.15	ENST00000488165.5	1954	14	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	63.4356590588975	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTGCCTTACGTTCAT	147926088	True	NA	NA	False	ATTAAA	-15	NA	147928392	147993339	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_147928579_147936626_147936687_147938713_147938818_147943437_147943545_147943976_147944099_147953344_147953466_147954321_147954403_147966553_147966664_147968874_147968964_147969866_147969960_147986198_147986295_147988431_147988522_147992501_147992568_147992710
transcript_131556.known	chr20	+	2339	8	FSM	ENSG00000101150.18	ENST00000352482.8	2339	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	320.195794692522	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCTTGTGTGATGTATCG	63857619	True	NA	36	True	AATAAA	-26	NA	63865289	63891545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63865385_63869295_63869442_63873667_63873817_63875815_63875876_63882718_63882821_63887563_63887606_63889189_63889239_63889849
transcript_131558.known	chr20	+	2302	8	FSM	ENSG00000101150.18	ENST00000351424.8	2302	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	356.38536812311	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCTTGTGTGATGTATCG	63857623	True	NA	36	True	AATAAA	-26	NA	63865293	63891545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63865385_63869295_63869442_63873667_63873817_63882718_63882821_63886015_63886043_63887563_63887606_63889189_63889239_63889849
transcript_131562.known	chr20	+	2310	7	FSM	ENSG00000101150.18	ENST00000346249.9	2310	7	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_4	224.830800578766	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCGCCTCGGCTTGTGTGA	63857599	True	NA	29	True	AATAAA	-19	NA	63865269	63891538	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63865385_63869295_63869442_63873667_63873817_63875815_63875876_63882718_63882821_63889189_63889239_63889849
transcript_131566.known	chr20	+	2275	7	FSM	ENSG00000101150.18	ENST00000358548.4	2275	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	334.198751576896	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCTTGTGTGATGTATCG	63857623	True	NA	36	True	AATAAA	-26	NA	63865293	63891545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63865385_63869295_63869442_63873667_63873817_63882718_63882821_63887563_63887606_63889189_63889239_63889849
transcript_13157.known	chr1	+	2160	14	FSM	ENSG00000188092.15	ENST00000314163.12	2160	14	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	36.5584560677714	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTTTCCTTTTTTTTT	147926115	True	NA	80	True	NA	NA	NA	147928419	147993592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_147928579_147936626_147936687_147938713_147938818_147943437_147943545_147943996_147944099_147953344_147953466_147954321_147954403_147966553_147966664_147968874_147968964_147969866_147969960_147986198_147986295_147988431_147988522_147992501_147992568_147992710
transcript_131571.known	chr20	+	2237	6	FSM	ENSG00000101150.18	ENST00000348257.9	2237	6	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_3	154.484173946719	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCTTGTGTGATGTATCG	63857619	True	NA	36	True	AATAAA	-26	NA	63865289	63891545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63865385_63869295_63869442_63873667_63873817_63882718_63882821_63889189_63889239_63889849
transcript_131575.known	chr20	+	2197	5	FSM	ENSG00000101150.18	ENST00000611972.4	2197	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	345.650112107605	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCTTGTGTGATGTATCG	63857557	True	NA	36	True	AATAAA	-26	NA	63865227	63891545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63865385_63869295_63869442_63873667_63873817_63889189_63889239_63889849
transcript_131578.known	chr20	+	5287	6	FSM	ENSG00000101152.11	ENST00000470551.1	5287	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	28.1040922287129	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTATGTCTTACTCGCTAGT	63894436	True	NA	36	True	AATAAA	-41	NA	63895181	63936031	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63895324_63928334_63928453_63929311_63929526_63930850_63931023_63931108_63931183_63931464
transcript_131580.known	chr20	+	5249	5	FSM	ENSG00000101152.11	ENST00000360864.9	5249	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_4	21.3585462988472	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCACTGCGGACCCCA	63894380	True	NA	16	True	AATAAA	-21	NA	63895125	63936011	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63895324_63928334_63928453_63929311_63929526_63930850_63931023_63931464
transcript_131589.known	chr20	-	5982	17	FSM	ENSG00000196700.9	ENST00000369888.6	5982	17	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_16	10.4373128725741	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTTTTGTGCGGCTCAGT	-63968736	True	NA	-5	True	AATAAA	-21	NA	63969930	63956703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63960140_63961308_63961408_63961941_63962005_63962272_63962375_63962586_63962782_63963094_63963266_63963341_63963441_63963617_63963711_63963788_63963914_63964070_63964218_63964319_63964392_63964489_63964717_63966140_63966782_63966875_63967005_63967380_63967524_63967829_63967953_63969813
transcript_131603.known	chr20	-	1838	15	FSM	ENSG00000198276.16	ENST00000354216.11	1838	15	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_14	154.899243091127	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGATTGGTTACAGCAC	-63953829	True	NA	NA	False	AATAAA	-21	NA	63956416	63939828	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63940056_63940149_63940307_63940377_63940486_63940593_63940717_63940793_63940857_63940949_63941044_63941109_63941209_63943652_63943670_63944396_63944459_63944544_63944735_63945650_63945723_63945804_63945976_63946160_63946268_63946452_63946644_63956259
transcript_131609.nic	chr20	-	2061	14	NIC	ENSG00000198276.16	novel	1838	15	NA	NA	-38	0	intron_retention	FALSE	canonical	3	119	junction_13	154.408127449578	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGATTGGTTACAGCAC	-63953867	True	NA	NA	False	AATAAA	-21	NA	63956454	63939828	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_63940056_63940149_63940307_63940377_63940486_63940593_63940717_63940793_63940857_63940949_63941044_63941109_63941209_63943652_63943670_63944396_63944459_63944544_63944735_63945650_63945723_63945804_63946268_63946452_63946644_63956259
transcript_131620.known	chr20	-	1845	13	FSM	ENSG00000198276.16	ENST00000358711.7	1845	13	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_6	170.301611527574	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAATGAAGGTGTGATT	-63953798	True	NA	NA	False	AATAAA	-10	NA	63956385	63939839	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63940056_63940149_63940307_63940377_63940486_63940593_63940717_63940793_63940857_63940949_63941209_63944396_63944459_63944544_63944735_63945650_63945723_63945804_63945976_63946160_63946268_63946452_63946644_63956259
transcript_13163.known	chr1	+	2633	14	FSM	ENSG00000188092.15	ENST00000478307.5	2633	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_8	68.1588815642883	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTTCAGTTATGTCATT	147926088	True	NA	9	True	AATAGA	-14	NA	147928392	147993521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_147928579_147936626_147936687_147938713_147938818_147943437_147943545_147943996_147944099_147953344_147953466_147954321_147954403_147966553_147966664_147968357_147968964_147969866_147969960_147986198_147986295_147988431_147988522_147992501_147992568_147992710
transcript_131632.nnic	chr20	-	1272	8	NNC	ENSG00000198276.16	novel	1838	15	NA	NA	-174	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_7	157.240878519395	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGATTGGTTACAGCAC	-63941759	False	NA	NA	False	AATAAA	-21	NA	63941783	63939828	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr20_-_63940056_63940149_63940307_63940377_63940486_63940593_63940717_63940793_63940857_63940949_63941044_63941109_63941209_63941382
transcript_131640.known	chr20	-	2178	5	FSM	ENSG00000130590.14	ENST00000369886.8	2178	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	7.42882897905181	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCGGTGCTGGGTCTGC	-63979516	True	NA	-6	True	AATAAA	-15	NA	63979642	63974115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_63975533_63975691_63975833_63976970_63977143_63977224_63977407_63979376
transcript_131650.known	chr20	+	3047	21	FSM	ENSG00000101161.8	ENST00000266079.5	3047	21	0	0	0	0	multi-exon	TRUE	canonical	3	542	junction_11	84.1808172923024	1336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCAGCCTGCTGGTTTTC	63969835	True	NA	23	True	ATTAAA	-24	NA	63981131	64033100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_63981317_63983046_63983216_63984906_63985026_63993406_63993486_63994915_63995093_63995326_63995483_63999044_63999140_63999602_63999760_64001076_64001240_64010199_64010319_64011284_64011504_64016722_64016846_64022756_64022879_64024554_64024694_64025938_64026059_64026981_64027159_64027602_64027737_64028477_64028570_64029376_64029492_64031917_64032045_64032840
transcript_131678.nic	chr20	+	549	3	ISM	ENSG00000101161.8	ENST00000266079.5	3047	21	-75	48074	-75	-48074	5prime_fragment	FALSE	canonical	3	623	junction_1	34	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGAAATTGTTGCCTTT	NA	False	NA	NA	False	GATAAA	-31	NA	63981056	63985026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr20_+_63981317_63983046_63983216_63984906
transcript_131679.known	chr20	+	1466	2	FSM	ENSG00000196421.9	ENST00000358393.1	1466	2	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGGAGCTACTGTCTCTG	64038030	False	NA	NA	False	NA	NA	NA	64038139	64039778	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_64038449_64038621
transcript_131683.known	chr20	+	1182	10	FSM	ENSG00000171703.17	ENST00000343484.10	1182	10	0	0	0	0	multi-exon	FALSE	canonical	2	182	junction_6	68.7336961588297	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTCTCCTCAGCCGTT	64060488	True	NA	16	True	ATTAAA	-16	NA	64063197	64072347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_64063385_64066475_64066539_64066914_64067021_64068046_64068135_64069360_64069492_64069764_64069822_64070259_64070415_64070488_64070636_64071869_64071942_64072171
transcript_131693.nic	chr20	+	1620	9	NIC	ENSG00000171703.17	novel	1182	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	311	junction_4	39.0830445973698	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTCTCCTCAGCCGTT	64060488	True	NA	16	True	ATTAAA	-16	NA	64063197	64072347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_+_64063385_64066475_64066539_64066914_64067021_64068046_64068135_64069360_64069492_64069764_64070415_64070488_64070636_64071869_64071942_64072171
transcript_131699.known	chr20	+	1733	8	FSM	ENSG00000171703.17	ENST00000395053.7	1733	8	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_4	40.2907798233729	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGTTCTCCTCAGCCGT	64060448	True	NA	15	True	ATTAAA	-15	NA	64063157	64072346	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_64063385_64066475_64066539_64066914_64067021_64068046_64068135_64069360_64069492_64069764_64070636_64071869_64071942_64072171
transcript_131712.known	chr20	+	421	2	FSM	ENSG00000171703.17	ENST00000476113.1	421	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGACTTAGCCCGCAGC	64060486	True	NA	8	True	AATAAA	-17	NA	64063195	64064123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_64063385_64063891
transcript_131714.known	chr20	-	1619	6	FSM	ENSG00000171700.14	ENST00000395042.2	1619	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_5	26.8432486856565	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTACTCATTTTTGTCC	-64079436	False	NA	-1	True	TTTAAA	-6	NA	64079518	64073180	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_64074045_64074143_64074379_64074466_64074542_64076524_64076647_64076856_64076955_64079293
transcript_131716.known	chr20	-	1510	6	FSM	ENSG00000171700.14	ENST00000332298.9	1510	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	27.9899982136477	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTACTCATTTTTGTCC	-64079906	False	82	-1	True	TTTAAA	-6	NA	64079988	64073180	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_64074045_64074143_64074379_64074466_64074542_64076524_64076647_64076856_64076955_64079872
transcript_131720.nic	chr20	-	1863	5	NIC	ENSG00000171700.14	novel	1619	6	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_4	41.2333299649689	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTACTCATTTTTGTCC	-64078715	True	NA	-1	True	TTTAAA	-6	NA	64079860	64073180	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_64074045_64074143_64074379_64074466_64074542_64076524_64076647_64079293
transcript_131721.nnic	chr20	-	1379	5	NIC	ENSG00000171700.14	novel	1510	6	NA	NA	33	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_4	39.5434887181189	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTACTCATTTTTGTCC	-64078810	True	NA	-1	True	TTTAAA	-6	NA	64079955	64073180	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr20_-_64074045_64074143_64074379_64074466_64074542_64076524_64076647_64079872
transcript_131724.known	chr20	-	823	3	FSM	ENSG00000171695.11	ENST00000302096.5	823	3	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_1	3	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCGCTGGTCTTTTTGCT	NA	False	NA	-1	True	CATAAA	-17	NA	64084398	64083375	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_64083495_64083582_64083706_64083817
transcript_131725.known	chr20	-	868	2	FSM	ENSG00000171695.11	ENST00000308906.6	868	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAAGGCTCGCTGGTCTTTT	NA	False	NA	-5	True	CATAAA	-13	NA	64084359	64083379	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_-_64083706_64083817
transcript_131731.known	chr20	+	3859	6	FSM	ENSG00000203880.12	ENST00000308824.11	3859	6	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_1	50.2633066958393	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGGAGAAGTGGCTGGC	64252785	True	NA	10	True	AATAAA	-18	NA	64255747	64276226	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_64255871_64259941_64260273_64264428_64264532_64265257_64265430_64267886_64268011_64273220
transcript_131736.known	chr20	+	3212	6	FSM	ENSG00000203880.12	ENST00000369758.8	3212	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	143.132945194319	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCCTGCGCACCTTATAC	64252778	True	NA	14	True	AATAAA	-15	NA	64255740	64275653	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr20_+_64255871_64259941_64260273_64264428_64264532_64265257_64265430_64267967_64268011_64273220
transcript_131746.known	chr21	+	3237	7	FSM	ENSG00000277117.5	ENST00000623960.4	3237	7	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	1.59861050777091	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGCCTGTATCCAGTGGC	NA	False	NA	NA	False	NA	NA	NA	5022530	5036771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_5022694_5025008_5025050_5026279_5026631_5027934_5028226_5032052_5032218_5033407_5033444_5034581
transcript_131748.known	chr21	+	998	7	FSM	ENSG00000277117.5	ENST00000623903.3	998	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.16397779494322	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGAGCACTTGGGGCAGC	NA	False	NA	NA	False	NA	NA	NA	5022530	5034684	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_5022694_5025008_5025050_5026431_5026631_5027934_5028226_5032052_5032218_5033407_5033444_5034581
transcript_131751.known	chr21	-	3188	21	FSM	ENSG00000275464.5	ENST00000617716.4	3188	21	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_20	102.023661471249	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGTCTTGTGGGGGC	-5154644	False	NA	NA	False	ATTAAA	-16	NA	5154658	5130870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_5131456_5133425_5133501_5133654_5133806_5133901_5134121_5135088_5135155_5135934_5136044_5137326_5137475_5139697_5139879_5140952_5141104_5141276_5141425_5141558_5141708_5142531_5142669_5143221_5143293_5144090_5144235_5146136_5146367_5146657_5146794_5147288_5147433_5147778_5147879_5148209_5148305_5152960_5153074_5154622
transcript_131759.nic	chr21	-	2107	16	ISM	ENSG00000275464.5	ENST00000617716.4	3188	21	-102	5151	-102	966	5prime_fragment	FALSE	canonical	3	78	junction_15	100.959265713125	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAGAGTTTGGCAACCTG	-5154746	False	NA	NA	False	AAGAAA	-3	NA	5154760	5136021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_-_5136044_5137326_5137475_5139697_5139879_5140952_5141104_5141276_5141425_5141558_5141708_5142531_5142669_5143221_5143293_5144090_5144235_5146136_5146367_5146657_5146794_5147288_5147433_5147778_5147879_5148209_5148305_5152960_5153074_5154622
transcript_131761.nic	chr21	-	2139	15	ISM	ENSG00000275464.5	ENST00000617716.4	3188	21	-155	6455	-155	-338	5prime_fragment	FALSE	canonical	3	78	junction_14	103.193893190618	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCGCCAGCGCGGGGCC	-5154799	False	NA	NA	False	NA	NA	NA	5154813	5137325	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_-_5137475_5139697_5139879_5140952_5141104_5141276_5141425_5141558_5141708_5142531_5142669_5143221_5143293_5144090_5144235_5146136_5146367_5146657_5146794_5147288_5147433_5147778_5147879_5148209_5148305_5152960_5153074_5154622
transcript_131766.known	chr21	-	1584	7	FSM	ENSG00000280071.4	ENST00000620528.5	1584	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	304.574429874429	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGCTGCATTCATCTG	-5123655	True	NA	NA	False	AATAAA	-17	NA	5128369	5116340	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_5117232_5118690_5118848_5121710_5121804_5124755_5124876_5125878_5125993_5127897_5127951_5128213
transcript_131776.nic	chr21	-	3147	6	NIC	ENSG00000280071.4	novel	1584	7	NA	NA	-62	-2	intron_retention	FALSE	canonical	3	729	junction_1	63.7539018413775	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTGTGCTGCATTCATC	-5123761	True	NA	NA	False	AATAAA	-15	NA	5128475	5116342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_5118848_5121710_5121804_5124755_5124876_5125878_5125993_5127897_5127951_5128213
transcript_131779.known	chr21	-	696	6	FSM	ENSG00000280071.4	ENST00000624648.3	696	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	314.561663271289	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCTGGCAGGTGAACCAC	-5128258	False	NA	NA	False	ATTAAA	-21	NA	5128273	5120633	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_5120890_5121710_5121804_5124755_5124876_5125878_5125993_5127897_5127951_5128213
transcript_131782.known	chr21	-	807	5	FSM	ENSG00000280071.4	ENST00000624714.3	807	5	0	0	0	0	multi-exon	FALSE	canonical	3	742	junction_1	58.3630876496438	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTCTCCCAAGCCCCTTA	-5123664	True	NA	NA	False	NA	NA	NA	5128378	5121448	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_5121804_5124755_5124876_5125878_5125993_5127897_5127951_5128213
transcript_131784.known	chr21	+	4747	14	FSM	ENSG00000275993.3	ENST00000613488.3	4747	14	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	3.92533871451479	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGGGAGCTCTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	6111130	6123778	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_6111253_6112069_6112240_6112738_6112856_6116223_6116288_6116461_6116624_6116893_6117019_6117127_6117252_6117803_6118028_6118255_6118403_6118782_6118909_6119023_6119241_6119719_6120002_6120486_6120719_6121143
transcript_131790.nic	chr21	-	2284	18	NIC	ENSG00000274276.5	novel	2353	18	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	500	junction_11	547.26015270663	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	-6467416	False	NA	NA	False	TATAAA	-14	NA	6467516	6444868	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_6445326_6445539_6445662_6448480_6448566_6449822_6449932_6450511_6450647_6450903_6450982_6452118_6452225_6453988_6454074_6454630_6454757_6455577_6455670_6456880_6456951_6457064_6457200_6457293_6457374_6457920_6458056_6460186_6460294_6463662_6463880_6464943_6465020_6467447
transcript_131795.known	chr21	-	2453	17	FSM	ENSG00000274276.5	ENST00000624406.3	2453	17	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_16	654.980173244771	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	-6467409	False	NA	NA	False	TATAAA	-14	NA	6467509	6444868	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_6445662_6448480_6448566_6449822_6449932_6450511_6450647_6450903_6450982_6452118_6452225_6453988_6454074_6454630_6454757_6455577_6455670_6456880_6456951_6457064_6457200_6457293_6457374_6457920_6458056_6460186_6460294_6463662_6463880_6464943_6464982_6467447
transcript_131796.known	chr21	-	2514	17	FSM	ENSG00000274276.5	ENST00000398168.6	2495	17	-19	0	0	0	multi-exon	FALSE	canonical	3	500	junction_10	514.548284906286	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	-6467432	False	NA	NA	False	TATAAA	-14	NA	6467532	6444868	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_6445662_6448480_6448566_6449822_6449932_6450511_6450647_6450903_6450982_6452118_6452225_6453988_6454074_6454630_6454757_6455577_6455670_6456880_6456951_6457064_6457200_6457293_6457374_6457920_6458056_6460186_6460294_6463662_6463880_6464943_6465020_6467447
transcript_131801.nic	chr21	-	2653	16	ISM	ENSG00000274276.5	ENST00000398168.6	2495	17	-39	2700	-18	-308	5prime_fragment	FALSE	canonical	3	500	junction_9	512.08169487126	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCAAATTCCAATGTCAG	-6467452	False	NA	NA	False	NA	NA	NA	6467552	6447568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_-_6448566_6449822_6449932_6450511_6450647_6450903_6450982_6452118_6452225_6453988_6454074_6454630_6454757_6455577_6455670_6456880_6456951_6457064_6457200_6457293_6457374_6457920_6458056_6460186_6460294_6463662_6463880_6464943_6465020_6467447
transcript_131815.known	chr21	-	963	9	FSM	ENSG00000275895.7	ENST00000620065.4	963	9	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_6	1980.24613369147	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTCTTGGTGTAACTTAT	-6492970	False	NA	NA	False	AATAAA	-17	NA	6499202	6484625	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_6484917_6486137_6486231_6486321_6486456_6487106_6487206_6487362_6487413_6492130_6492198_6493043_6493111_6495992_6496081_6499128
transcript_131823.known	chr21	-	945	8	FSM	ENSG00000275895.7	ENST00000610664.5	945	8	0	0	0	0	multi-exon	FALSE	canonical	3	3771	junction_6	907.400638289034	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGGTGTAACTTATTTC	-6493016	True	NA	NA	False	AATAAA	-20	NA	6499248	6484622	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_6484917_6486137_6486231_6486321_6486456_6487106_6487206_6487362_6487413_6492130_6492198_6495992_6496081_6499128
transcript_131824.known	chr21	-	813	8	FSM	ENSG00000275895.7	ENST00000619610.2	813	8	0	0	0	0	multi-exon	FALSE	canonical	3	2360	junction_5	1551.68765266357	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAAGGGGAATTTTTTTT	-6492970	False	NA	NA	False	NA	NA	NA	6499202	6484708	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_6484917_6486137_6486231_6486321_6486456_6487106_6487206_6487362_6487413_6493043_6493111_6495992_6496081_6499128
transcript_131830.known	chr21	-	674	2	FSM	ENSG00000278878.1	ENST00000624181.1	674	2	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACATATTTATTAAAATTT	NA	False	NA	NA	False	AATAAA	-15	NA	6670650	6667709	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_6668255_6670521
transcript_131834.known	chr21	+	994	3	FSM	ENSG00000276077.4	ENST00000624461.3	994	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGTCAGGAAAAAGCGTCT	NA	False	NA	NA	False	NA	NA	NA	7430729	7467742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_7430839_7462826_7462992_7467022
transcript_131835.known	chr21	+	1193	5	FSM	ENSG00000273590.5	ENST00000622934.3	1193	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	88.3130086680326	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTATCTTGTTTTACAG	NA	False	NA	NA	False	AATAAA	-22	NA	7744970	7772246	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_7745039_7748898_7748988_7754951_7755119_7769186_7769376_7771566
transcript_131836.known	chr21	+	843	4	FSM	ENSG00000273590.5	ENST00000619874.5	870	4	24	3	4	-2	multi-exon	FALSE	canonical	3	176	junction_3	3.29983164553722	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCGTGGCCTTTGGAAT	NA	False	NA	NA	False	AATAAA	-18	NA	7744974	7758627	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_7745039_7748898_7748988_7754951_7755119_7758104
transcript_131840.known	chr21	+	1074	4	FSM	ENSG00000273590.5	ENST00000624758.3	1074	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	84.4445906431483	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCGTGGCCTTTGGAATAA	NA	False	NA	NA	False	AATAAA	-20	NA	7745074	7758629	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_7745368_7748898_7748988_7754951_7755119_7758104
transcript_131842.known	chr21	+	153	1	FSM	ENSG00000277739.1	ENST00000610460.1	153	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCGATCAATCGCCCCC	NA	False	NA	NA	False	GGGGCT	-19	NA	8256780	8256933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_8256800_8256900
transcript_131846.known	chr21	+	153	1	FSM	ENSG00000275215.1	ENST00000613359.1	153	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCGATCAATCGCCCCC	NA	False	NA	NA	False	GGGGCT	-19	NA	8395606	8395759	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_8395600_8395800
transcript_131847.known	chr21	+	153	1	FSM	ENSG00000278189.1	ENST00000619471.1	153	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCGATCAATCGCCCCC	NA	False	NA	NA	False	GGGGCT	-19	NA	8439822	8439975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_8439800_8440000
transcript_131849.known	chr21	+	812	3	FSM	ENSG00000224905.8	ENST00000448463.3	816	3	4	0	-2	0	multi-exon	FALSE	canonical	1	2	junction_2	16	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAGTCTAAAATGCAGTTT	14026570	True	NA	NA	False	NA	NA	NA	14027418	14089046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_14027598_14083949_14084145_14088608
transcript_131853.known	chr21	+	1332	3	FSM	ENSG00000224905.8	ENST00000428809.5	1332	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	14.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTTTGAGATTCTAAT	14026572	True	NA	NA	False	AATAAA	-27	NA	14027420	14144468	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_14027598_14083949_14084145_14143508
transcript_131854.known	chr21	+	553	3	FSM	ENSG00000224905.8	ENST00000653756.2	578	3	25	0	19	0	multi-exon	FALSE	canonical	0	0	junction_2	17	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAATTTTCTTCATTGA	14026591	True	NA	NA	False	AAAAAG	-20	NA	14027439	14088783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_14027598_14083949_14084145_14088583
transcript_131855.known	chr21	+	1955	5	FSM	ENSG00000185272.14	ENST00000400577.4	1955	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	4.54835134966506	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGTAACTGAATTTTAAT	14215767	True	NA	NA	False	AATAAA	-18	NA	14216156	14228372	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_14216283_14219562_14219726_14221096_14221170_14224437_14224538_14226879
transcript_131857.known	chr21	-	3945	5	FSM	ENSG00000155304.6	ENST00000285667.4	3945	5	0	0	0	0	multi-exon	TRUE	canonical	3	173	junction_4	14.5150783669948	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTACTTTTTCATTCAG	-14379773	True	NA	-2	True	AATAAA	-27	NA	14383146	14371114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_14374285_14375651_14375820_14378198_14378413_14381202_14381544_14383094
transcript_131860.known	chr21	-	7751	4	FSM	ENSG00000180530.11	ENST00000318948.7	7751	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	5.35412613473634	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTTTGAAATGACTGTT	-15063894	True	NA	-9	True	AATAAA	-20	NA	15065000	14961234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_14968527_15014343_15014467_15043494_15043575_15064744
transcript_131864.known	chr21	-	7671	3	FSM	ENSG00000180530.11	ENST00000400202.5	7671	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTTTGAAATGACTGTT	-15063894	True	NA	-9	True	AATAAA	-20	NA	15065000	14961234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_14968527_15014343_15014467_15064744
transcript_131868.known	chr21	+	5216	25	FSM	ENSG00000155313.16	ENST00000285681.6	5216	25	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_18	49.0361084360857	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACAGTGGTAAAGTTGTT	15728678	True	NA	30	True	AAGAAA	-27	NA	15730024	15880058	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_15730439_15762890_15762969_15765996_15766142_15777903_15778028_15791501_15791665_15799756_15799844_15805120_15805259_15808808_15808886_15811136_15811211_15818697_15818847_15824038_15824167_15824965_15825062_15826203_15826366_15826976_15827204_15830530_15830602_15831400_15831630_15833347_15833549_15842397_15842541_15849776_15849873_15864267_15864447_15866265_15866345_15870067_15870148_15874402_15874527_15877795_15877992_15878302
transcript_131869.known	chr21	+	3973	24	FSM	ENSG00000155313.16	ENST00000285679.10	3973	24	0	0	0	0	multi-exon	TRUE	canonical	3	127	junction_14	25.8085872492743	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTGTAAGCAGGTATA	15728678	True	NA	17	True	AATAAA	-28	NA	15730024	15878911	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_15730439_15762890_15762969_15765996_15766142_15777903_15778028_15791501_15791665_15799756_15799844_15805120_15805259_15808808_15808886_15811136_15811211_15818697_15818847_15824038_15824167_15824965_15825062_15826203_15826366_15826976_15827204_15830530_15830602_15831400_15831630_15833347_15833549_15842397_15842541_15864267_15864447_15866265_15866345_15870067_15870148_15874402_15874527_15877795_15877992_15878302
transcript_131873.known	chr21	+	1445	8	FSM	ENSG00000154639.19	ENST00000400169.1	1445	8	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_7	375.103305498523	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTAGTTAAATACATTGA	17481591	False	NA	-23	True	TTTAAA	-29	NA	17513129	17593579	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_17513173_17547026_17547194_17551748_17551954_17558975_17559132_17560701_17560825_17561337_17561477_17565427_17565612_17593151
transcript_131881.known	chr21	+	5593	7	FSM	ENSG00000154639.19	ENST00000284878.12	5593	7	0	0	0	0	multi-exon	FALSE	canonical	3	1008	junction_6	86.3243238542237	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTCATGGTGTGGC	17481504	True	NA	2	True	AATAAA	-15	NA	17513042	17570100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_17513173_17547026_17547194_17551748_17551954_17558975_17559132_17560701_17560825_17561337_17561477_17565427
transcript_131883.nic	chr21	+	1114	6	ISM	ENSG00000154639.19	ENST00000284878.12	5593	7	-239	8669	-239	-4056	5prime_fragment	FALSE	canonical	3	1093	junction_5	54.7846693884338	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCGCAGAGAAGAAAAATATG	NA	False	NA	NA	False	NA	NA	NA	17512803	17561431	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_17513173_17547026_17547194_17551748_17551954_17558975_17559132_17560701_17560825_17561337
transcript_131888.known	chr21	+	1080	5	FSM	ENSG00000154639.19	ENST00000400166.5	1080	5	0	0	0	0	multi-exon	TRUE	canonical	3	179	junction_4	450.09721172209	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCGAAATAGTTACAGGC	17481507	True	NA	NA	False	AATATA	-24	NA	17513045	17565852	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_17513173_17547026_17547194_17551748_17551954_17558975_17559132_17565427
transcript_131892.known	chr21	-	1485	6	FSM	ENSG00000154640.15	ENST00000339775.10	1485	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	81.5033741632823	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACGCGTGTTTCTGTTGTG	NA	False	NA	-1	True	AATAAA	-19	NA	17612844	17593652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_17594333_17598616_17598825_17604144_17604277_17604859_17604998_17608971_17609153_17612698
transcript_131895.known	chr21	-	1410	5	FSM	ENSG00000154640.15	ENST00000348354.7	1410	5	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_2	23.0908531674341	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACGCGTGTTTCTGTTGTG	NA	False	NA	-1	True	AATAAA	-19	NA	17612901	17593652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_17594333_17598616_17598825_17604859_17604998_17608971_17609153_17612698
transcript_131898.known	chr21	-	531	2	FSM	ENSG00000154640.15	ENST00000464058.1	531	2	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACAGGAGGCCAATGCTA	NA	False	NA	NA	False	TTTAAA	-41	NA	17612851	17608774	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_17609153_17612698
transcript_131899.known	chr21	+	2341	1	FSM	ENSG00000280594.2	ENST00000630155.1	2341	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATACTCTTCTAGGACTT	NA	False	NA	NA	False	AATAAA	-22	NA	17611772	17614113	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_17611800_17614100
transcript_131902.known	chr21	-	1593	5	FSM	ENSG00000154642.11	ENST00000400559.7	1593	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	55.8854855933095	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTTGTTTTAATTTCT	-17816025	True	NA	0	True	GATAAA	-19	NA	17819386	17792803	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_17793579_17795207_17795271_17796581_17797119_17818191_17818326_17819302
transcript_131910.known	chr21	-	1784	5	FSM	ENSG00000228592.2	ENST00000262354.5	1784	5	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	25.9939896899264	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGCCCAGTCTCAAGT	-23384898	False	NA	NA	False	ATTAAA	-14	NA	23384920	23361103	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_23362240_23364037_23364194_23372326_23372449_23372947_23373085_23384687
transcript_131917.known	chr21	-	2848	4	FSM	ENSG00000228592.2	ENST00000654898.1	2848	4	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_1	14.7044966667418	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAATAATGACAATAAAA	-23381595	True	NA	NA	False	AAAAAG	-22	NA	23384846	23361763	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_23364194_23372326_23372449_23372947_23373085_23384687
transcript_131923.known	chr21	-	1074	10	FSM	ENSG00000154719.14	ENST00000352957.9	1074	10	0	0	0	0	multi-exon	FALSE	canonical	3	765	junction_1	95.5496122182698	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTGTGTGCTTATACA	-25603904	True	NA	NA	False	AATAAA	-20	NA	25607481	25585655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_25585755_25588834_25588883_25592811_25592966_25593892_25593959_25597301_25597415_25599798_25599867_25601367_25601468_25603795_25603936_25606448_25606656_25607402
transcript_131927.known	chr21	-	1199	11	FSM	ENSG00000154719.14	ENST00000307301.11	1199	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	382.928988194939	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTGTGTGCTTATACA	-25603940	True	NA	NA	False	AATAAA	-20	NA	25607517	25585655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_25585755_25587700_25587790_25588834_25588883_25592811_25592966_25593892_25593959_25597301_25597415_25599798_25599867_25601367_25601468_25603795_25603936_25606448_25606656_25607402
transcript_131929.known	chr21	+	4351	10	FSM	ENSG00000154721.15	ENST00000480456.6	4351	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	8.20568908339411	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACTTGTTAAACTTTT	25639185	True	NA	20	True	AATAAA	-5	NA	25639257	25717562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_25639889_25683882_25683949_25689865_25689974_25693755_25693909_25698676_25698880_25702169_25702270_25705978_25706087_25709433_25709450_25712339_25712383_25714639
transcript_131932.known	chr21	+	5120	10	FSM	ENSG00000154727.11	ENST00000354828.7	5120	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	43.7275515599959	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGTGTTGCTTAAAA	NA	False	NA	3	True	AATAAA	-15	NA	25734569	25772460	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_25735071_25741572_25741676_25745209_25745355_25749035_25749121_25751988_25752235_25758009_25758205_25762311_25762366_25764209_25764351_25764594_25764788_25769003
transcript_131939.known	chr21	+	5226	10	FSM	ENSG00000154727.11	ENST00000400075.4	5226	10	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	22.6323269290239	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGTGTTGCTTAAAA	25734256	True	NA	3	True	AATAAA	-15	NA	25734971	25772460	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_25735579_25741572_25741676_25745209_25745355_25749035_25749121_25751988_25752235_25758009_25758205_25762311_25762366_25764209_25764351_25764594_25764788_25769003
transcript_131950.known	chr21	-	589	5	FSM	ENSG00000154723.13	ENST00000400094.5	589	5	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_4	3051.77672635139	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTGTTAGAGTTGT	-25708768	True	NA	-6	True	AATAAA	-38	NA	25734904	25724479	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25734332_25734376_25734852
transcript_131957.known	chr21	-	1179	4	FSM	ENSG00000154723.13	ENST00000400093.3	1179	4	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_3	2896.89331679454	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTGTTAGAGTTGT	-25735655	False	NA	-6	True	AATAAA	-38	NA	25735673	25724479	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25734988
transcript_131958.known	chr21	-	826	4	FSM	ENSG00000154723.13	ENST00000400087.7	826	4	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_3	2929.13369824974	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTGTTAGAGTTGT	-25734173	True	NA	-6	True	AATAAA	-38	NA	25735646	25724479	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25735314
transcript_131959.known	chr21	-	647	4	FSM	ENSG00000154723.13	ENST00000400090.7	647	4	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_3	2928.66640109264	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTGTTAGAGTTGT	-25734166	True	NA	-6	True	AATAAA	-38	NA	25735639	25724479	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25735486
transcript_131964.known	chr21	-	526	4	FSM	ENSG00000154723.13	ENST00000284971.8	526	4	0	0	0	0	multi-exon	FALSE	canonical	3	5795	junction_1	434.822824710121	1829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTTCTTGATGAATTGA	-25708768	True	NA	-26	True	AATAAA	-18	NA	25734904	25724499	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25734852
transcript_131965.known	chr21	-	589	4	FSM	ENSG00000154723.13	ENST00000457143.6	589	4	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_3	2932.40481516451	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTGTTAGAGTTGT	-25708897	True	NA	-6	True	AATAAA	-38	NA	25735033	25724479	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25734938
transcript_131966.known	chr21	-	3583	18	FSM	ENSG00000142192.21	ENST00000346798.8	3583	18	0	0	0	0	multi-exon	FALSE	canonical	3	553	junction_11	250.679809282692	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGTGCTGGTGTGAATG	-26109456	True	NA	-30	True	AATAAA	-19	NA	26170770	25880549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_25881772_25891721_25891869_25897572_25897674_25905023_25905078_25911740_25911963_25954589_25954690_25955626_25955756_25975069_25975229_25975953_25976029_25982343_25982478_25997359_25997417_26000014_26000183_26021839_26022043_26050999_26051194_26053235_26053349_26089942_26090073_26111978_26112147_26170563
transcript_131970.known	chr21	-	3543	17	FSM	ENSG00000142192.21	ENST00000357903.7	3543	17	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_10	229.135595431504	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGTGCTGGTGTGAATG	-26109473	True	NA	-30	True	AATAAA	-19	NA	26170787	25880549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_25881772_25891721_25891869_25897572_25897674_25905023_25905078_25911740_25911963_25954589_25954690_25955626_25955756_25975069_25975229_25975953_25976029_25982343_25982478_26000014_26000183_26021839_26022043_26050999_26051194_26053235_26053349_26089942_26090073_26111978_26112147_26170563
transcript_131971.known	chr21	-	2517	17	FSM	ENSG00000142192.21	ENST00000439274.6	2517	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	375.893435696874	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTTTGTGACCCAATTA	-26170578	False	NA	NA	False	NA	NA	NA	26170654	25881331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_25881772_25891721_25891869_25897572_25897674_25905023_25905078_25911740_25911963_25954589_25954690_25955626_25955756_25975069_25975229_25975953_25976029_25982343_25982478_25997359_25997417_26000014_26000183_26021839_26022043_26050999_26051194_26053235_26053349_26089942_26090073_26170563
transcript_131975.known	chr21	-	3355	16	FSM	ENSG00000142192.21	ENST00000348990.9	3355	16	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_10	311.880504182113	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGTGCTGGTGTGAATG	-26109453	True	NA	-30	True	AATAAA	-19	NA	26170767	25880549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_25881772_25891721_25891869_25897572_25897674_25905023_25905078_25911740_25911963_25954589_25954690_25955626_25955756_25975069_25975229_25975953_25976029_25982343_25982478_26021839_26022043_26050999_26051194_26053235_26053349_26089942_26090073_26111978_26112147_26170563
transcript_131985.nic	chr21	-	966	3	ISM	ENSG00000142192.21	ENST00000474136.5	1309	7	-53	79915	-12	0	5prime_fragment	FALSE	canonical	3	1061	junction_2	21.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGGCTGTTCTACA	-26109485	True	NA	NA	False	NA	NA	NA	26170799	26089510	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_-_26090073_26111978_26112147_26170563
transcript_131997.known	chr21	-	3072	4	FSM	ENSG00000166265.13	ENST00000299340.9	3072	4	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	80.129062559515	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCATTGTCTTGTGTCCA	-26568760	True	NA	-5	True	AATAAA	-31	NA	26573255	26466208	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_26468632_26480271_26480430_26566265_26566369_26572867
transcript_131998.known	chr21	-	3099	4	FSM	ENSG00000166265.13	ENST00000652641.2	3099	4	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	122.817841628251	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATATTTTCATTGTCTT	-26568791	True	NA	-12	True	AATAAA	-24	NA	26573286	26466215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_26468635_26480271_26480430_26566265_26566369_26572867
transcript_132001.known	chr21	-	735	4	FSM	ENSG00000166265.13	ENST00000400043.3	735	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	157.726204403566	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAAGTTTCACCCTGGAA	-26568681	True	NA	NA	False	NA	NA	NA	26573176	26477970	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_26478136_26480271_26480430_26566265_26566369_26572867
transcript_132010.known	chr21	-	5183	9	FSM	ENSG00000154734.16	ENST00000284984.8	5183	9	0	0	0	0	multi-exon	TRUE	canonical	3	144	junction_4	20.9284495364563	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGGATGCTTTTTGAAT	-26838210	True	NA	NA	False	ATTAAA	-16	NA	26845409	26835754	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_26838279_26838438_26838615_26839586_26839763_26839874_26840062_26840275_26840563_26840997_26841166_26841857_26841991_26842338_26842686_26844224
transcript_132018.known	chr21	-	4975	8	FSM	ENSG00000154734.16	ENST00000676955.1	4975	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	64.3406114807303	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCTGGTATATACCATAAA	-26838210	True	NA	NA	False	AAAACA	-40	NA	26845409	26835794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_26838279_26838438_26838615_26839586_26839763_26839874_26840062_26840275_26840563_26841857_26841991_26842338_26842686_26844224
transcript_13203.known	chr1	-	1050	3	FSM	ENSG00000274020.4	ENST00000613452.1	1050	3	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	6.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGGCTTATCCTTGAAT	-148459545	False	NA	-1	True	AATAAA	-16	NA	148459757	148432958	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_148433644_148435145_148435355_148459601
transcript_132039.known	chr21	-	1293	7	FSM	ENSG00000156239.12	ENST00000460212.1	1293	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	30.9659310999829	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTGTACGCGTGCC	-28883886	True	NA	-10	True	AATAAA	-17	NA	28885371	28872190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_28872740_28876311_28876492_28878191_28878334_28879869_28879954_28882159_28882251_28882984_28883072_28885211
transcript_13204.known	chr1	-	820	2	FSM	ENSG00000274020.4	ENST00000614292.1	820	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAATCATATGGAAGTGAAA	-148459628	True	NA	NA	False	NA	NA	NA	148459840	148434773	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_148435355_148459601
transcript_132042.known	chr21	-	4861	6	FSM	ENSG00000156239.12	ENST00000303775.10	4861	6	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_3	15.4272486205415	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTGTACGCGTGCC	-28883882	True	NA	-10	True	AATAAA	-17	NA	28885367	28872190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_28876492_28878191_28878334_28879869_28879954_28882159_28882251_28882984_28883072_28885211
transcript_132047.known	chr21	-	4781	5	FSM	ENSG00000156239.12	ENST00000351429.7	4781	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	32.2722791262099	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTGTACGCGTGCC	-28883886	True	NA	-10	True	AATAAA	-17	NA	28885371	28872190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_28876492_28878191_28878334_28882159_28882251_28882984_28883072_28885211
transcript_132052.nic	chr21	-	3495	19	ISM	ENSG00000198862.14	ENST00000361371.10	7677	30	-3	19387	-3	10875	5prime_fragment	FALSE	canonical	3	77	junction_8	14.0296203410349	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTAGTGCTCAATGTAT	-28988247	True	NA	NA	False	AAGAAA	-6	NA	28992880	28947530	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_-_28947607_28952159_28952265_28953216_28953377_28956761_28956949_28957331_28957477_28958385_28958540_28959457_28959698_28960516_28960707_28965864_28965907_28966369_28967180_28969465_28969602_28970551_28970743_28971270_28971445_28981118_28981300_28982315_28982369_28984691_28984923_28986138_28986238_28986730_28986935_28992763
transcript_132056.nic	chr21	-	2502	13	ISM	ENSG00000198862.14	ENST00000361371.10	7677	30	-3	31480	-3	-1174	5prime_fragment	FALSE	canonical	3	77	junction_2	15.2059929706094	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATCAGAAGCTGAAAGCAG	-28988247	True	NA	NA	False	AAGAAA	-1	NA	28992880	28959623	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_-_28959698_28960516_28960707_28965864_28965907_28966369_28967180_28969465_28969602_28970551_28970743_28971270_28971445_28981118_28981300_28982315_28982369_28984691_28984923_28986138_28986238_28986730_28986935_28992763
transcript_132057.nic	chr21	-	1682	10	ISM	ENSG00000198862.14	ENST00000389195.7	2714	13	69	5567	-3	11	5prime_fragment	FALSE	canonical	3	93	junction_6	12.1360599297006	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTAAGGTTAGATTTGCTG	-28988247	True	NA	NA	False	AGTAAA	-9	NA	28992880	28966883	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_-_28967180_28969465_28969602_28970551_28970743_28971270_28971445_28981118_28981300_28982315_28982369_28984691_28984923_28986138_28986238_28986730_28986935_28992763
transcript_132059.known	chr21	-	3065	5	FSM	ENSG00000156253.7	ENST00000493196.2	3065	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	23.092206477511	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGTAGTTTTATAAGTTT	-29018214	True	NA	NA	False	CATAAA	-15	NA	29019349	29004383	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_29006652_29007760_29008124_29008239_29008308_29008394_29008622_29019210
transcript_13206.known	chr1	-	1108	5	FSM	ENSG00000286019.1	ENST00000593495.3	1108	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	24.9236333627343	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTGACATTAACAGTGG	-148679091	True	NA	NA	False	AATAAA	-12	NA	148679779	148607039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_148607160_148607409_148607746_148615690_148615951_148640015_148640090_148679461
transcript_132060.known	chr21	-	1787	4	FSM	ENSG00000156253.7	ENST00000472184.1	1787	4	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	12.2836838484589	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTAGGCTTTTTTTTTAA	-29018224	True	NA	0	True	AATAAA	-16	NA	29019359	29005758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_29006652_29007760_29008124_29008239_29008622_29019210
transcript_132061.known	chr21	-	1625	4	FSM	ENSG00000156253.7	ENST00000286777.6	1625	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	44.1537717024894	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTAGGCTTTTTTTTTAA	-29018217	True	NA	0	True	AATAAA	-16	NA	29019352	29005758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_29006652_29007760_29008124_29008394_29008622_29019210
transcript_132071.known	chr21	-	636	1	FSM	ENSG00000273254.1	ENST00000608809.1	636	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGTTTGTTTGAGACG	-29024866	True	NA	NA	False	AATAAA	-16	NA	29024890	29024254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_29024300_29024900
transcript_132072.known	chr21	+	2924	18	FSM	ENSG00000156256.15	ENST00000399976.7	2924	18	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	19.9483762813663	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTTTTATTACTGGGAA	29022593	True	NA	7	True	AATAAA	-17	NA	29024667	29054488	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_29024778_29027872_29027975_29030594_29030774_29034836_29034941_29036270_29036375_29037275_29037464_29038334_29038431_29039025_29039157_29039480_29039569_29040608_29040688_29042012_29042105_29042471_29042529_29043422_29043600_29046666_29047322_29048760_29048856_29050091_29050179_29053801_29053959_29054065
transcript_132073.known	chr21	+	2960	18	FSM	ENSG00000156256.15	ENST00000399975.7	2960	18	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	19.6206232860092	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTTTTATTACTGGGAA	29024534	False	NA	7	True	AATAAA	-17	NA	29024628	29054488	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_29024778_29027872_29027975_29030594_29030774_29034836_29034941_29036270_29036375_29037278_29037464_29038334_29038431_29039025_29039157_29039480_29039569_29040608_29040688_29042012_29042105_29042471_29042529_29043422_29043600_29046666_29047322_29048760_29048856_29050091_29050179_29053801_29053959_29054065
transcript_132082.known	chr21	-	1872	15	FSM	ENSG00000156261.13	ENST00000470450.5	1872	15	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_14	858.206367004666	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTGTCTAATGACCACG	-29043691	True	NA	-14	True	AATAAA	-21	NA	29073639	29056323	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_29056553_29060540_29060661_29061252_29061418_29061495_29061568_29062127_29062244_29062327_29062416_29062489_29062557_29063351_29063531_29064967_29065106_29066715_29066778_29066890_29067072_29067555_29067706_29069422_29069503_29070246_29070338_29073505
transcript_132083.known	chr21	-	1854	15	FSM	ENSG00000156261.13	ENST00000286788.9	1854	15	0	0	0	0	multi-exon	FALSE	canonical	3	2789	junction_9	253.92233265392	1301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTATTGTCTAATGACCA	-29043700	True	NA	-16	True	AATAAA	-19	NA	29073648	29056325	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_29056553_29060540_29060661_29061252_29061418_29061495_29061568_29062127_29062244_29062327_29062416_29062489_29062557_29063351_29063531_29064967_29065106_29066715_29066778_29066890_29067072_29067555_29067706_29069422_29069503_29070246_29070338_29073530
transcript_132106.known	chr21	+	5618	5	FSM	ENSG00000156273.16	ENST00000286800.8	5618	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	24.5153013442625	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATTGTACATTCCATTT	29297252	True	NA	13	True	AATAAA	-27	NA	29298921	29346148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_29298954_29321220_29321515_29326058_29327394_29329486_29329694_29342398
transcript_132109.known	chr21	+	5769	5	FSM	ENSG00000156273.16	ENST00000399921.5	5769	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	32.3419232575925	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATTGTACATTCCATTT	29299370	False	NA	13	True	AATAAA	-27	NA	29299415	29346148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_29299599_29321220_29321515_29326058_29327394_29329486_29329694_29342398
transcript_13212.known	chr1	+	8824	17	FSM	ENSG00000178104.19	ENST00000529945.2	8824	17	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_6	16.8076201096407	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTGGTTTTATTCTTAA	148952329	False	NA	9	True	AATAAA	-22	NA	148952340	148986477	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_148953906_148960653_148960786_148961836_148961957_148962195_148962289_148962427_148962641_148965483_148965643_148966542_148966657_148966838_148966977_148967725_148967906_148968835_148969031_148972179_148972345_148972510_148972593_148974513_148974606_148977936_148978054_148978277_148978416_148979736_148979850_148981269
transcript_132122.known	chr21	-	4160	13	FSM	ENSG00000156299.14	ENST00000636887.1	4160	13	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_12	15.0302934842345	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTAAATGCTTGTCAAAC	-31160812	True	NA	-42	True	NA	NA	NA	31160909	31118457	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_31120838_31124521_31124695_31127064_31127153_31130212_31130316_31130889_31130949_31135932_31136042_31141117_31141237_31141324_31141505_31146894_31147004_31152635_31152762_31153065_31153135_31154246_31154427_31160444
transcript_132137.nnic	chr21	-	2810	8	NNC	ENSG00000156299.14	novel	7200	29	NA	NA	-476	-13109	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_6	10.8552629951502	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATATTAGATCAGGTAATC	-31559438	False	NA	NA	False	AAAAAG	-5	NA	31559453	31225739	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr21_-_31225951_31245487_31245661_31251741_31252190_31266009_31266984_31276731_31276909_31339242_31339423_31463915_31464036_31558926
transcript_132138.nic	chr21	-	2743	8	ISM	ENSG00000156299.14	ENST00000286827.7	7200	29	-476	107324	-476	-13109	5prime_fragment	FALSE	canonical	3	16	junction_6	11.5228256171862	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATATTAGATCAGGTAATC	-31559438	False	NA	NA	False	AAAAAG	-5	NA	31559453	31225739	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_-_31225951_31245487_31245661_31251741_31252190_31266009_31266984_31276731_31276909_31339242_31339423_31463982_31464036_31558926
transcript_132139.nnic	chr21	-	2751	8	NNC	ENSG00000156299.14	novel	7200	29	NA	NA	-476	-13168	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_6	10.8552629951502	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGAAGAAAATGGGTGAAA	-31559438	False	NA	NA	False	NA	NA	NA	31559453	31225798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr21_-_31225951_31245487_31245661_31251741_31252190_31266009_31266984_31276731_31276909_31339242_31339423_31463915_31464036_31558926
transcript_132144.nic	chr21	-	2386	7	ISM	ENSG00000156299.14	ENST00000541036.6	7218	28	-99	107322	-99	-13109	5prime_fragment	FALSE	canonical	1	3	junction_6	16.0692943909253	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATATTAGATCAGGTAATC	NA	False	NA	NA	False	AAAAAG	-5	NA	31344360	31225739	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_-_31225951_31245487_31245661_31251741_31252190_31266009_31266984_31276731_31276909_31339242_31339423_31344137
transcript_132147.nnic	chr21	-	2204	7	NIC	ENSG00000156299.14	novel	7200	29	NA	NA	-114	-13109	combination_of_known_splicesites	FALSE	canonical	3	13	junction_4	14.4731552269097	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATATTAGATCAGGTAATC	-31559076	False	NA	NA	False	AAAAAG	-5	NA	31559091	31225739	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_31225951_31245487_31245661_31251741_31252190_31266009_31266984_31339242_31339423_31463982_31464036_31558926
transcript_13215.known	chr1	+	2746	17	FSM	ENSG00000178104.19	ENST00000479408.6	2746	17	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	28.8638371279704	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGGCCAATAAAGTTTAT	NA	False	NA	-20	True	NA	NA	NA	148951936	148981746	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_148952155_148960653_148960786_148961836_148961957_148962195_148962289_148962427_148962641_148965483_148965643_148966542_148966657_148966838_148966977_148967725_148967906_148968835_148969031_148972179_148972345_148972510_148972593_148974513_148974606_148977936_148978054_148978277_148978416_148979736_148979850_148981269
transcript_132152.known	chr21	+	822	2	FSM	ENSG00000237594.2	ENST00000433071.2	822	2	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGGTCTCTTTTCTTTC	31558496	True	NA	6	True	NA	NA	NA	31559244	31560487	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_31559596_31560016
transcript_132154.nnic	chr21	-	2148	3	NNC	ENSG00000234509.1	novel	2233	3	NA	NA	-47	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAGCTAAAAAAAAAAAAAA	-31659484	True	NA	NA	False	CATAAA	-26	NA	31659547	31653592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr21_-_31655428_31657933_31658096_31659396
transcript_132155.known	chr21	-	2233	3	FSM	ENSG00000234509.1	ENST00000449339.1	2233	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAGCTAAAAAAAAAAAAAA	-31659437	True	NA	NA	False	CATAAA	-26	NA	31659500	31653592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_31655428_31657933_31658228_31659396
transcript_132156.known	chr21	+	895	5	FSM	ENSG00000142168.15	ENST00000270142.11	895	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1175.24750052914	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCTCTGATACTTATTTA	31634500	True	NA	60	True	ATTAAA	-22	NA	31659692	31668931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_31659842_31663789_31663887_31666448_31666519_31667257_31667376_31668470
transcript_132158.known	chr21	+	865	5	FSM	ENSG00000142168.15	ENST00000389995.4	865	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1175.24750052914	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCTCTGATACTTATTTA	31634473	True	NA	60	True	ATTAAA	-22	NA	31659665	31668931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_31659785_31663789_31663887_31666448_31666519_31667257_31667376_31668470
transcript_132162.known	chr21	-	4127	20	FSM	ENSG00000156304.15	ENST00000399804.5	4127	20	0	0	0	0	multi-exon	TRUE	canonical	3	112	junction_2	61.1938023041812	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAATGTGTGCTATTCTT	-31723978	True	NA	82	True	AATAAA	-19	NA	31732075	31671032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_31672355_31685048_31685175_31685397_31685485_31685567_31685734_31688306_31688465_31690796_31690954_31691816_31691931_31692348_31692450_31693293_31693485_31694203_31694290_31694812_31694981_31696112_31696222_31696568_31696751_31700994_31701172_31701775_31701919_31702243_31702380_31703764_31703927_31705422_31705468_31706273_31706358_31731662
transcript_132163.known	chr21	-	4269	20	FSM	ENSG00000156304.15	ENST00000286835.12	4269	20	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_2	44.2043228730496	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTGGAAAAGGATTGTTC	-31724021	True	NA	NA	False	NA	NA	NA	31732118	31670999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_31672355_31685048_31685241_31685397_31685485_31685567_31685734_31688306_31688465_31690796_31690954_31691816_31691931_31692348_31692450_31693293_31693485_31694203_31694290_31694812_31694981_31696112_31696222_31696568_31696751_31700994_31701172_31701775_31701919_31702243_31702380_31703764_31703927_31705422_31705468_31706273_31706358_31731662
transcript_132169.known	chr21	-	1282	7	FSM	ENSG00000156304.15	ENST00000485790.1	1282	7	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_1	36.5680491990238	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAAAAAGAA	-31731945	False	NA	NA	False	ATTAAA	-6	NA	31731961	31700758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_31701172_31701775_31701919_31702243_31702380_31703764_31703927_31705422_31705468_31706273_31706358_31731662
transcript_132172.known	chr21	-	1546	5	FSM	ENSG00000159055.4	ENST00000290130.4	1546	5	0	0	0	0	multi-exon	FALSE	canonical	3	1311	junction_1	7.0178344238091	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTTTAAGATTGATTTTT	-32269316	True	NA	-22	True	AATAAA	-13	NA	32279049	32268227	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_32269118_32269706_32269804_32270406_32270530_32274829_32274897_32278680
transcript_132180.known	chr21	-	10818	39	FSM	ENSG00000142207.7	ENST00000382751.4	10818	39	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_27	28.5947421701682	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGCCTCGGATATGTCTT	-32386812	True	NA	NA	False	ATTAAA	-21	NA	32393012	32311017	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_32315100_32316465_32317066_32317675_32317918_32319216_32319415_32320530_32320641_32321800_32321945_32322477_32322585_32324490_32324603_32325228_32325390_32333316_32333420_32334162_32334335_32337093_32337158_32337403_32337515_32338706_32338901_32341465_32341525_32344569_32344757_32345373_32345576_32346955_32347812_32349303_32349484_32350703_32350923_32352709_32352907_32353932_32354104_32354858_32354998_32355448_32355566_32357536_32357657_32359795_32359909_32361006_32361124_32361891_32362022_32363155_32363330_32366617_32366756_32368402_32368599_32372506_32372632_32373646_32373773_32375397_32375484_32378444_32378542_32383421_32383555_32384312_32384465_32385544_32385685_32392768
transcript_132182.known	chr21	+	831	1	FSM	ENSG00000256073.3	ENST00000534991.3	831	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCTGGTACATATTTTAA	32392801	True	NA	NA	False	AATAAA	-24	NA	32393129	32393960	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_32393100_32394000
transcript_132183.known	chr21	-	4781	8	FSM	ENSG00000265590.10	ENST00000673807.1	4781	8	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_3	492.281237024661	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCCCAGAGCAAACATATA	-32612478	False	NA	NA	False	NA	NA	NA	32612865	32573784	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_32576924_32578693_32578832_32582199_32582416_32603160_32603293_32604124_32604284_32607648_32607717_32609837_32610006_32612104
transcript_132190.known	chr21	-	3979	5	FSM	ENSG00000265590.10	ENST00000673672.1	3979	5	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_3	479.49791448973	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACAAAACATGGTCCAAAT	-32604046	False	9775	NA	False	AATAAA	-1	NA	32604433	32573739	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_32576924_32578693_32578832_32582199_32582416_32603160_32603293_32604124
transcript_132191.known	chr21	+	1668	8	FSM	ENSG00000166979.13	ENST00000382699.7	1668	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	3.65892813567591	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTGTATTTCTTTGA	32412546	True	NA	8	True	AATAAA	-19	NA	32412701	32515389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_32413014_32453311_32453509_32457596_32457721_32467695_32467849_32495026_32495171_32501414_32501487_32503925_32504016_32514813
transcript_132192.known	chr21	+	1671	8	FSM	ENSG00000166979.13	ENST00000300255.7	1671	8	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	2.77010277566647	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTCTGTATTTCTTT	32412550	True	NA	6	True	AATAAA	-17	NA	32412705	32515387	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_32413014_32453311_32453509_32457596_32457721_32467695_32467849_32495026_32495171_32501414_32501496_32503925_32504016_32514813
transcript_132194.nic	chr21	-	1361	7	NIC	ENSG00000159079.19	novel	3516	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	64	junction_6	373.333816963972	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAAATCGTTTTTGTTT	-32609960	True	NA	89	True	AATAAA	-19	NA	32612586	32601666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_32601974_32602271_32602368_32603160_32603293_32604124_32604284_32607648_32607717_32609837_32609955_32612104
transcript_132195.known	chr21	-	3516	7	FSM	ENSG00000159079.19	ENST00000290155.8	3516	7	0	0	0	0	multi-exon	FALSE	canonical	3	926	junction_5	74.62796616104	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTTCGACCATCAAACTG	-32602602	True	NA	NA	False	AATAAA	-19	NA	32612377	32599353	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_32601974_32602271_32602368_32603160_32603293_32604124_32604284_32607648_32607717_32609837_32610006_32612104
transcript_13220.nic	chr1	+	3249	13	ISM	ENSG00000178104.19	ENST00000529945.2	8824	17	-61	11932	-61	6775	5prime_fragment	FALSE	canonical	3	88	junction_6	14.33599781436	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTGAGTAATGCCAAAGA	148952268	False	NA	NA	False	NA	NA	NA	148952279	148974545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_148953906_148960653_148960786_148961836_148961957_148962195_148962289_148962427_148962641_148965483_148965643_148966542_148966657_148966838_148966977_148967725_148967906_148968835_148969031_148972179_148972345_148972510_148972593_148974513
transcript_132201.known	chr21	-	1243	6	FSM	ENSG00000159079.19	ENST00000300260.7	1243	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	430.379646358886	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCACTTACTGCCCTCTGT	-32612216	False	NA	-29	True	TTTAAA	-12	NA	32612603	32601784	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_32601974_32602271_32602368_32603160_32603293_32604124_32604284_32609837_32610006_32612104
transcript_132204.known	chr21	-	1082	6	FSM	ENSG00000159079.19	ENST00000440966.5	1082	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	390.038664750048	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAAATCGTTTTTGTTT	-32602577	True	NA	89	True	AATAAA	-19	NA	32612352	32601666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_32601974_32603160_32603293_32604124_32604284_32607648_32607717_32609837_32610006_32612104
transcript_132209.known	chr21	-	2503	5	FSM	ENSG00000159079.19	ENST00000382549.8	2503	5	0	0	0	0	multi-exon	FALSE	canonical	3	926	junction_3	73.8816621361485	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAAATCGTTTTTGTTT	-32609960	True	NA	89	True	AATAAA	-19	NA	32612586	32601666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_32603293_32604124_32604284_32607648_32607717_32609837_32610006_32612104
transcript_132218.nic	chr21	-	582	2	ISM	ENSG00000159079.19	ENST00000300260.7	1243	6	-16	8154	-16	-6714	5prime_fragment	FALSE	canonical	3	1001	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTGAAGAATTGAAATTGA	-32612232	False	NA	NA	False	NA	NA	NA	32612619	32609938	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_-_32610006_32612104
transcript_132219.known	chr21	-	6958	29	FSM	ENSG00000159082.18	ENST00000382491.7	6958	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.87326630606167	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACTTCTTTGTTAGAAAG	-32728025	False	NA	-4	True	AATAAA	-20	NA	32728040	32628758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_32631802_32634860_32634885_32638907_32639126_32639670_32639780_32641895_32641967_32645645_32645790_32646392_32646603_32650183_32650347_32653287_32653367_32656686_32656903_32657002_32657121_32657715_32657873_32664912_32665072_32665942_32666136_32666432_32666574_32670287_32670373_32673339_32673532_32678644_32678811_32681495_32681649_32684037_32684120_32685747_32685918_32686977_32687075_32688305_32688368_32694227_32694312_32695056_32695283_32699837_32700106_32701960_32702048_32726771_32726918_32727945
transcript_132224.known	chr21	-	2212	16	FSM	ENSG00000159082.18	ENST00000429236.5	2212	16	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_12	3.60863162739316	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGATTTTATAGAAATAG	-32727626	True	NA	NA	False	AAGAAA	-5	NA	32727939	32665985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_32666136_32666432_32666574_32670287_32670373_32673339_32673532_32678644_32678811_32681495_32681649_32684037_32684120_32685747_32685918_32686977_32687075_32688305_32688368_32694227_32694312_32695056_32695283_32699837_32700106_32701960_32702048_32726771_32726918_32727836
transcript_132227.known	chr21	-	2920	18	FSM	ENSG00000159086.15	ENST00000443785.5	2920	18	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_12	171.430153642394	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCCTTAAATGATATTTC	NA	False	NA	6	True	AATACA	-22	NA	32771687	32734819	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_32735068_32737253_32737409_32738172_32738320_32743247_32743315_32743677_32743755_32744791_32744914_32745573_32745719_32748498_32748699_32750916_32751033_32751118_32751219_32755212_32755354_32759079_32759270_32759776_32759995_32761058_32761163_32762095_32762318_32764347_32764525_32769813_32769943_32771325
transcript_132228.known	chr21	+	5020	2	FSM	ENSG00000205930.10	ENST00000655231.1	5020	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGTACATACATATCTGC	NA	False	NA	NA	False	AATAAA	-1	NA	32772134	32789642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_32772309_32784796
transcript_132230.known	chr21	+	2941	14	FSM	ENSG00000249624.10	ENST00000682009.1	2941	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	43.2018792052372	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATATATGTTTTATATGC	33228255	True	NA	-52	True	NA	NA	NA	33229917	33297160	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_33230217_33241885_33241978_33243672_33243715_33244950_33245075_33246717_33246891_33248708_33248855_33252661_33252831_33266011_33266176_33268393_33268518_33276595_33276754_33279751_33279919_33283093_33283242_33288103_33288262_33296183
transcript_132235.nnic	chr21	+	3044	10	NNC	ENSG00000159110.21	novel	1127	10	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	45.1072795307661	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGGTCTTGAGTTG	33228226	True	NA	9	True	AATACA	-3	NA	33229888	33265664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr21_+_33230217_33241885_33241978_33243672_33243715_33244950_33245075_33246717_33246891_33248708_33248855_33252661_33252831_33260596_33260728_33262792_33263901_33264933
transcript_132237.known	chr21	+	1389	9	FSM	ENSG00000159110.21	ENST00000382264.7	1389	9	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	14.4865239101725	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACGGACTCTCTCTCTCTT	33228238	True	NA	19	True	AATAAA	-19	NA	33229900	33262756	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_33230217_33241885_33241978_33243672_33243715_33244950_33245075_33246717_33246891_33248708_33248855_33252661_33252831_33260596_33260728_33262560
transcript_13224.nic	chr1	+	2748	8	ISM	ENSG00000178104.19	ENST00000529945.2	8824	17	-307	19594	-90	-887	5prime_fragment	FALSE	canonical	3	88	junction_6	16.9933960762433	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGCGCCAGCTTCGTCT	148951619	True	NA	NA	False	AAGAAA	-3	NA	148952033	148966883	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_148953906_148960653_148960786_148961836_148961957_148962195_148962289_148962427_148962641_148965483_148965643_148966542_148966657_148966838
transcript_132241.known	chr21	+	4284	9	FSM	ENSG00000159110.21	ENST00000404220.7	4284	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	30.3394854109294	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGTTGTCTTCCATTGG	33228308	True	NA	20	True	AATACA	-14	NA	33229970	33265675	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_33230217_33241839_33241978_33243672_33243715_33244950_33245075_33246717_33246891_33248708_33248855_33252661_33252831_33260596_33260728_33262560
transcript_132246.known	chr21	+	3943	16	FSM	ENSG00000249624.10	ENST00000683116.1	3943	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	43.5410406653564	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATATATGTTTTATATGC	33228229	True	NA	-52	True	NA	NA	NA	33229891	33297160	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_33230217_33241885_33241978_33243672_33243715_33244950_33245075_33246717_33246891_33248708_33248855_33252661_33252831_33260596_33260728_33262792_33263638_33266011_33266176_33268393_33268518_33276595_33276754_33279751_33279919_33283093_33283242_33288103_33288262_33296183
transcript_132249.known	chr21	+	1941	7	FSM	ENSG00000243646.10	ENST00000290200.7	1941	7	0	0	0	0	multi-exon	FALSE	canonical	2	34	junction_6	6.7515430335097	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTCATGATACTACCTG	33265866	True	NA	9	True	ATTAAA	-24	NA	33266366	33297221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_33266515_33268393_33268518_33276595_33276754_33279751_33279919_33283093_33283242_33288103_33288262_33296183
transcript_132253.known	chr21	+	786	6	FSM	ENSG00000243646.10	ENST00000422891.5	786	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	16.0573970493352	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAATGATGTTTTTGACA	33265881	True	NA	NA	False	NA	NA	NA	33266381	33296239	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_33266515_33268393_33268518_33279751_33279919_33283093_33283242_33288103_33288262_33296183
transcript_132255.known	chr21	+	6075	11	FSM	ENSG00000142166.13	ENST00000270139.8	6075	11	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_10	14.5481957644238	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTCTCACTACCTTTT	33322288	True	NA	NA	False	AAGAAA	-42	NA	33324969	33359864	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_33325132_33335523_33335648_33340998_33341175_33343267_33343423_33343534_33343677_33345245_33345361_33349090_33349291_33349388_33349544_33352757_33352909_33353637_33353784_33355315
transcript_132260.nic	chr21	+	1292	8	ISM	ENSG00000142166.13	ENST00000270139.8	6075	11	-67	10325	-1	373	5prime_fragment	FALSE	canonical	3	140	junction_6	12.0407471461174	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGGTAAAAAGACTGTATA	33324876	False	NA	7	True	AAAACA	-11	NA	33324902	33349539	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_33325132_33335523_33335648_33340998_33341175_33343267_33343423_33343534_33343677_33345245_33345361_33349090_33349291_33349388
transcript_132261.known	chr21	+	1397	7	FSM	ENSG00000142166.13	ENST00000652513.1	1397	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	57.1297256737292	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTTAAAAGCGCCTTT	33322293	True	NA	NA	False	AATAAA	-23	NA	33324974	33349077	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_33325132_33335523_33335648_33340998_33341175_33343267_33343423_33343534_33343677_33345245_33345361_33348549
transcript_132265.known	chr21	+	783	5	FSM	ENSG00000142166.13	ENST00000652654.1	783	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	71.1073132666395	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTAAGTTCCATTCCATAA	33322222	True	NA	NA	False	NA	NA	NA	33324903	33345358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_33325132_33335523_33335648_33340998_33341175_33343534_33343677_33345245
transcript_132279.known	chr21	-	3062	9	FSM	ENSG00000142188.17	ENST00000420455.5	3062	9	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	39.5371660592916	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAGCTCATTATTCCTGC	-33478327	True	NA	-3	True	AATAAA	-45	NA	33479943	33432484	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_33432803_33439213_33439298_33448781_33450864_33455726_33455785_33460412_33460506_33465341_33465410_33467009_33467123_33468786_33468927_33479837
transcript_132281.known	chr21	+	1684	8	FSM	ENSG00000159128.15	ENST00000405436.5	1684	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	196.563849521664	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTTTTTTAAAGTCTAT	33400234	True	NA	6	True	AATAAA	-13	NA	33403465	33437502	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_33403617_33410840_33410893_33414887_33415021_33421479_33421686_33426883_33427033_33432176_33432337_33432713_33432872_33436827
transcript_132282.known	chr21	+	1742	8	FSM	ENSG00000159128.15	ENST00000381995.5	1742	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	196.399322497688	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGTGTTTTCTTTATT	33400200	True	NA	25	True	AATAAA	-32	NA	33403431	33437521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_33403617_33410835_33410893_33414887_33415021_33421479_33421686_33426883_33427033_33432176_33432337_33432713_33432872_33436827
transcript_132284.known	chr21	-	982	8	FSM	ENSG00000142188.17	ENST00000442441.5	982	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	69.2216198384668	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGGTTACATCATCTTG	-33478320	True	NA	54	True	NA	NA	NA	33479936	33450546	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_33450864_33455726_33455785_33456003_33456098_33460412_33460506_33465341_33465410_33467009_33467123_33468786_33468927_33479837
transcript_132289.known	chr21	+	1699	7	FSM	ENSG00000159128.15	ENST00000290219.11	1699	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	146.830590212742	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTATGTGAAGTGTTTTCT	33400181	True	NA	20	True	AATAAA	-27	NA	33403412	33437516	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_33403617_33414887_33415021_33421479_33421686_33426883_33427033_33432176_33432337_33432713_33432872_33436827
transcript_132291.known	chr21	-	2332	7	FSM	ENSG00000142188.17	ENST00000542230.7	2332	7	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_2	26.9799308128592	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAATATTGTTGTTTGTT	-33478358	True	NA	-6	True	AATAAA	-17	NA	33479974	33449140	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_33450864_33455726_33455785_33460412_33460506_33465341_33465410_33467009_33467123_33468786_33468927_33479837
transcript_132296.known	chr21	+	966	6	FSM	ENSG00000159128.15	ENST00000545369.2	966	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	189.985262586339	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTCCAAACGCTTTGAAC	33400209	True	NA	NA	False	NA	NA	NA	33403440	33436944	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_33403617_33421479_33421686_33426883_33427033_33432176_33432337_33432713_33432872_33436827
transcript_132301.known	chr21	-	1485	2	FSM	ENSG00000177692.12	ENST00000381947.4	1485	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAGAAAATAACTGAA	-33491468	True	NA	NA	False	NA	NA	NA	33491716	33488054	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_33489425_33491601
transcript_132308.known	chr21	-	3318	22	FSM	ENSG00000159131.17	ENST00000381815.9	3318	22	0	0	0	0	multi-exon	FALSE	canonical	3	951	junction_10	319.837402001112	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACAGTTTTCTTGGTCTT	-33529099	True	NA	-9	True	AATAGA	-43	NA	33542117	33503932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_33504316_33504411_33504528_33505560_33505703_33505973_33506105_33509782_33509921_33511251_33511459_33516988_33517142_33517356_33517609_33520363_33520563_33520905_33521016_33522187_33522283_33524768_33525001_33528166_33528336_33528518_33528605_33528849_33528938_33530758_33530885_33531488_33531558_33532344_33532457_33534578_33534754_33535224_33535321_33539170_33539357_33542064
transcript_132313.known	chr21	-	3490	22	FSM	ENSG00000159131.17	ENST00000381831.7	3490	22	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_21	431.886721941725	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTTTTCTTGGTCTTTT	-33542281	True	NA	-7	True	AATAGA	-45	NA	33542842	33503930	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_33504316_33504411_33504528_33505560_33505703_33505973_33506105_33509782_33509921_33511251_33511459_33516988_33517142_33517356_33517609_33520363_33520563_33520905_33521016_33522187_33522283_33524768_33525001_33528166_33528336_33528518_33528605_33528849_33528938_33530758_33530885_33531488_33531558_33532344_33532457_33534578_33534754_33535224_33535321_33539170_33539324_33542586
transcript_132316.known	chr21	-	3571	22	FSM	ENSG00000159131.17	ENST00000424203.5	3571	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	499.850403924869	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACAGTTTTCTTGGTCTT	-33542331	True	NA	-9	True	AATAGA	-43	NA	33542892	33503932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_33504316_33504411_33504528_33505560_33505703_33505973_33506105_33509782_33509921_33511251_33511459_33516988_33517142_33517356_33517609_33520363_33520563_33520905_33521016_33522187_33522283_33524768_33525001_33528166_33528336_33528514_33528605_33528849_33528938_33530758_33530885_33531488_33531558_33532344_33532457_33534578_33534754_33535224_33535321_33539170_33539357_33542590
transcript_132317.known	chr21	-	3469	22	FSM	ENSG00000159131.17	ENST00000381839.7	3469	22	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_21	430.740658330775	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTTTTCTTGGTCTTTT	-33542300	True	NA	-7	True	AATAGA	-45	NA	33542861	33503930	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_33504316_33504411_33504528_33505560_33505703_33505973_33506105_33509782_33509921_33511251_33511459_33516988_33517142_33517356_33517609_33520363_33520563_33520905_33521016_33522187_33522283_33524768_33525001_33528166_33528336_33528518_33528605_33528849_33528938_33530758_33530885_33531488_33531558_33532344_33532457_33534578_33534754_33535224_33535321_33539170_33539357_33542659
transcript_13232.known	chr1	+	918	3	FSM	ENSG00000274265.5	ENST00000667654.1	918	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	6.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGCGTGATGGTATGTT	149174953	True	NA	NA	False	AATAAA	-34	NA	149175892	149251069	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_149176251_149177157_149177213_149250564
transcript_132339.nic	chr21	-	2552	18	ISM	ENSG00000159131.17	ENST00000381815.9	3318	22	-38	5882	-38	-627	5prime_fragment	FALSE	canonical	3	951	junction_6	334.261702582197	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGAGTGGCTGTCTTAA	-33529137	True	NA	20	True	NA	NA	NA	33542155	33509814	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_-_33509921_33511251_33511459_33516988_33517142_33517356_33517609_33520363_33520563_33520905_33521016_33522187_33522283_33524768_33525001_33528166_33528336_33528518_33528605_33528849_33528938_33530758_33530885_33531488_33531558_33532344_33532457_33534578_33534754_33535224_33535321_33539170_33539357_33542064
transcript_13234.known	chr1	+	1006	2	FSM	ENSG00000274265.5	ENST00000668239.1	1006	2	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCAGGCGTGATGGTATG	149175723	False	NA	NA	False	AATAAA	-32	NA	149175747	149251067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_149176251_149250564
transcript_132356.known	chr21	-	2149	11	FSM	ENSG00000159131.17	ENST00000361093.9	2149	11	0	0	0	0	multi-exon	FALSE	canonical	3	1467	junction_10	114.359127313914	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGTGTTTTGATTTCTT	-33529096	True	NA	-4	True	AATAAA	-15	NA	33542114	33524008	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_33525001_33528166_33528336_33528518_33528605_33528849_33528938_33530758_33530885_33531488_33531558_33532344_33532457_33534578_33534754_33535224_33535321_33539170_33539357_33542064
transcript_13236.known	chr1	+	1417	2	FSM	ENSG00000274265.5	ENST00000655610.1	1417	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAATTAAAGTGAATATCA	149174950	True	NA	NA	False	TTTAAA	-42	NA	149175889	149178213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_149176251_149177157
transcript_132364.known	chr21	+	8393	12	FSM	ENSG00000159140.21	ENST00000356577.10	8393	12	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_11	230.87336874723	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTGTTTTATTTTCTGG	33504149	True	NA	-19	True	AATAAA	-1	NA	33543037	33577481	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_33543170_33546212_33546380_33549475_33555392_33557155_33557317_33559229_33559377_33559586_33559776_33567156_33567268_33568970_33569088_33573307_33573456_33575595_33575668_33575777_33575894_33576364
transcript_132365.known	chr21	+	5269	10	FSM	ENSG00000159140.21	ENST00000436227.5	5269	10	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_9	105.205618776861	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTGTTTTATTTTCTGG	33552236	False	NA	-19	True	AATAAA	-1	NA	33552247	33577481	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_33555392_33557155_33557317_33559229_33559377_33559586_33559776_33567156_33567268_33568970_33569088_33573307_33573456_33575595_33575668_33575777_33575894_33576417
transcript_132374.known	chr21	-	2500	10	FSM	ENSG00000159147.18	ENST00000303071.10	2500	10	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_8	34.3353109822368	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATTGGGTAAAGAAATAAT	-33584230	True	NA	-3	True	AATAAA	-19	NA	33588684	33577550	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_33578445_33579349_33579563_33581301_33581501_33581950_33582056_33582164_33582247_33583487_33583667_33584589_33584769_33585977_33586182_33587521_33587603_33588320
transcript_132377.known	chr21	-	1719	9	FSM	ENSG00000159147.18	ENST00000437395.5	1719	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_8	85.9927322510455	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTACTACAGTAGCATCT	-33584180	True	NA	NA	False	TATAAA	-6	NA	33588634	33578200	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_33578445_33579349_33579563_33581301_33581501_33581950_33582056_33582164_33582247_33583487_33583667_33584589_33584769_33585977_33586182_33588320
transcript_132388.nic	chr21	+	1304	3	ISM	ENSG00000159140.21	ENST00000381679.8	7860	5	-885	9434	-858	2583	5prime_fragment	FALSE	canonical	3	1046	junction_2	53.5	1052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGCCAGAAGAATCTGAG	NA	False	NA	NA	False	TATAAA	-2	NA	33542179	33549622	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_33543170_33546212_33546380_33549475
transcript_13239.known	chr1	+	1850	5	FSM	ENSG00000286219.2	ENST00000652191.1	1850	5	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	22.9932055181525	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTAATTTGTTCATTTCA	149389748	True	NA	NA	False	ATTAAA	-32	NA	149390632	149464958	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_149390923_149430933_149431016_149455317_149455578_149463490_149463827_149464076
transcript_132390.known	chr21	+	7860	5	FSM	ENSG00000159140.21	ENST00000381679.8	7860	5	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	432.213488914911	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCAGCCAGAGTGTGTTT	33504176	True	NA	5	True	AATAAA	-15	NA	33543064	33559056	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_33543170_33546212_33546380_33549475_33555392_33557155_33557317_33557545
transcript_132393.known	chr21	+	658	2	FSM	ENSG00000159140.21	ENST00000475072.1	658	2	0	0	0	0	multi-exon	FALSE	canonical	3	1153	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGGGCGACAAGAATGAAA	33504163	True	NA	NA	False	NA	NA	NA	33543051	33546752	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_33543170_33546212
transcript_132396.known	chr21	+	5408	29	FSM	ENSG00000205726.15	ENST00000399352.5	5408	29	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_23	41.3766300005702	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAAATGTCTCTGTGTT	33630905	True	NA	29	True	ATTAAA	-19	NA	33642495	33838498	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_33642714_33718796_33718857_33721177_33721271_33722587_33722652_33735043_33735205_33750142_33750323_33751809_33751907_33755296_33755398_33761922_33761987_33765874_33766013_33767712_33767829_33772060_33772324_33774728_33774879_33774967_33775109_33781460_33781549_33781993_33782134_33794340_33794469_33797378_33797609_33799807_33799930_33810974_33811223_33813912_33814073_33818266_33818473_33819240_33819324_33823486_33823654_33826817_33826864_33829623_33829746_33834306_33834425_33836440_33836633_33836986
transcript_132398.known	chr21	+	5191	27	FSM	ENSG00000205726.15	ENST00000399349.5	5191	27	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_23	62.6762249309707	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGGAAATGTCTCTGTG	33630907	True	NA	27	True	ATTAAA	-17	NA	33642497	33838496	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_33642714_33718796_33718857_33721177_33721271_33722587_33722652_33735043_33735205_33750142_33750323_33751809_33751907_33755296_33755398_33761922_33761987_33765874_33766013_33767712_33767829_33772060_33772324_33774728_33774879_33774967_33775109_33781460_33781549_33781993_33782134_33794340_33794469_33797378_33797609_33799807_33799930_33810974_33811223_33813912_33814073_33818266_33818473_33819240_33819324_33829623_33829746_33834306_33834425_33836440_33836633_33836986
transcript_132415.nic	chr21	+	2243	17	ISM	ENSG00000205726.15	ENST00000399355.6	4003	28	-82	42864	16	19350	5prime_fragment	FALSE	canonical	3	269	junction_12	31.8712620357274	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATCATAGAATTAGAAAAAC	33642269	False	NA	14	True	NA	NA	NA	33642415	33794429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_33642714_33718796_33718857_33721177_33721271_33722587_33722652_33735043_33735205_33750142_33750323_33751809_33751907_33755296_33755398_33761922_33761987_33765874_33766013_33767712_33767829_33772060_33772324_33774728_33774879_33774967_33775109_33781460_33781549_33781993_33782134_33794340
transcript_132417.known	chr21	+	3913	29	FSM	ENSG00000205726.15	ENST00000399353.5	3913	29	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	71.6206969715729	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAGTCCTCAAAGAGACC	NA	False	NA	NA	False	NA	NA	NA	33642399	33837018	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_33642714_33718796_33718857_33721177_33721271_33722587_33722652_33735043_33735205_33750253_33750323_33751809_33751907_33755296_33755398_33761922_33761987_33765874_33766013_33767712_33767829_33772060_33772324_33774728_33774879_33774967_33775109_33781460_33781549_33781993_33782134_33794340_33794469_33797378_33797609_33799807_33799930_33810974_33811223_33813912_33814073_33818266_33818473_33819240_33819324_33823486_33823654_33826817_33826864_33829623_33829746_33834306_33834425_33836440_33836633_33836986
transcript_13243.known	chr1	+	1103	5	FSM	ENSG00000286219.2	ENST00000650865.2	8729	5	-7	7633	-7	-758	multi-exon	FALSE	canonical	3	19	junction_1	33.7120156620751	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGACATTAACAGTAGGTGA	149389729	True	NA	NA	False	AATAAA	-16	NA	149390613	149464200	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_149390923_149430941_149431016_149455317_149455578_149463490_149463827_149464076
transcript_132431.nic	chr21	+	1757	13	ISM	ENSG00000205726.15	ENST00000399355.6	4003	28	-82	62443	16	-229	5prime_fragment	FALSE	canonical	3	269	junction_12	25.7718354022371	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTTGGAATTTGAATTAG	33642269	False	NA	19	True	AAGAAA	-43	NA	33642415	33774850	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_33642714_33718796_33718857_33721177_33721271_33722587_33722652_33735043_33735205_33750142_33750323_33751809_33751907_33755296_33755398_33761922_33761987_33765874_33766013_33767712_33767829_33772060_33772324_33774728
transcript_132442.nic	chr21	+	1365	11	ISM	ENSG00000205726.15	ENST00000399355.6	4003	28	-82	69472	16	-4461	5prime_fragment	FALSE	canonical	3	315	junction_5	18.3401199559872	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCTGGTAAGGCAGCCTT	33642269	False	NA	18	True	AAGAAA	-1	NA	33642415	33767821	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_33642714_33718796_33718857_33721177_33721271_33722587_33722652_33735043_33735205_33750142_33750323_33751809_33751907_33755296_33755398_33761922_33761987_33765874_33766013_33767712
transcript_132449.known	chr21	-	1482	13	FSM	ENSG00000205758.12	ENST00000381540.7	1482	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	97.9731751835958	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAAAGTAACGTATTAATT	-33638850	True	NA	-27	True	GATAAA	-26	NA	33641747	33589466	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_33589922_33591161_33591212_33595730_33595837_33597279_33597402_33599149_33599249_33602233_33602346_33603403_33603538_33613537_33613607_33616705_33616751_33621995_33622069_33624682_33624761_33631485_33631558_33641680
transcript_132461.known	chr21	-	2558	12	FSM	ENSG00000205758.12	ENST00000420072.5	2558	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	114.952020174283	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33642338	33594661	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_33595615_33595730_33595837_33597279_33597402_33599149_33599286_33602233_33602346_33603403_33603538_33613537_33613607_33616705_33616751_33621995_33622069_33624682_33624761_33631485_33631558_33641680
transcript_132462.nic	chr21	-	1959	12	NIC	ENSG00000205758.12	novel	2224	13	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	95.022833271668	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTTACGTAATTAGTAT	-33638860	True	NA	NA	False	NA	NA	NA	33641757	33594642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_33595615_33595730_33595837_33597279_33597402_33599149_33599249_33602233_33602346_33603403_33603538_33613537_33613607_33616705_33616751_33621995_33622069_33624682_33624761_33631485_33631558_33641680
transcript_132478.known	chr21	-	627	6	FSM	ENSG00000205758.12	ENST00000413017.2	627	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	114.465016489756	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTCCTGGTTTTTGGAA	-33638825	True	NA	NA	False	AATAAA	-13	NA	33641722	33616286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_33616604_33616705_33616751_33621995_33622069_33624682_33624761_33631485_33631558_33641680
transcript_132479.known	chr21	-	1598	13	FSM	ENSG00000205758.12	ENST00000381554.8	1598	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	97.9731751835958	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTTTTCAACTATTC	-33638844	True	NA	0	True	NA	NA	NA	33641741	33589340	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_33589922_33591161_33591208_33595730_33595837_33597279_33597402_33599149_33599249_33602233_33602346_33603403_33603538_33613537_33613607_33616705_33616751_33621995_33622069_33624682_33624761_33631485_33631558_33641680
transcript_13248.known	chr1	+	737	3	FSM	ENSG00000277147.7	ENST00000621156.1	737	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	8	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTTCTATTATTTTAT	149606628	False	NA	17	True	AATAAA	-31	NA	149607408	149647624	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_149607555_149646598_149646946_149647380
transcript_132480.known	chr21	-	816	8	FSM	ENSG00000241837.7	ENST00000652380.1	816	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	2325.2310923117	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTATGTTCACTGTCTT	-33868946	True	NA	31	True	AATAAA	-18	NA	33915814	33903454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_33903640_33903934_33904022_33906448_33906501_33907340_33907454_33909081_33909212_33912288_33912400_33914449_33914501_33915727
transcript_132485.known	chr21	-	756	7	FSM	ENSG00000241837.7	ENST00000290299.7	756	7	0	0	0	0	multi-exon	FALSE	canonical	3	4445	junction_6	387.616505783172	1656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGTTCACTGTCTTTT	-33868936	True	NA	-32	True	AATAAA	-20	NA	33915804	33903452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_33903640_33903934_33904022_33907340_33907454_33909081_33909212_33912288_33912400_33914449_33914501_33915727
transcript_132487.known	chr21	-	583	6	FSM	ENSG00000241837.7	ENST00000431254.5	583	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	2087.32991163352	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGTTCACTGTCTTTT	-33868893	True	NA	-32	True	AATAAA	-20	NA	33915761	33903452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_33903640_33903934_33904022_33907340_33907454_33912288_33912400_33914449_33914501_33915727
transcript_13249.nic	chr1	+	968	3	NIC	ENSG00000277147.7	novel	737	3	NA	NA	-15	-5	combination_of_known_junctions	FALSE	canonical	3	38	junction_2	15	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACATTGGTTCTATTAT	149606511	True	NA	12	True	AATAAA	-26	NA	149607291	149647619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_149607555_149646598_149647065_149647380
transcript_132492.known	chr21	+	2090	3	FSM	ENSG00000237945.8	ENST00000400353.6	2090	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCAAGTGATCTACCCTC	33930708	True	NA	NA	False	NA	NA	NA	33931213	33971186	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_33931268_33945809_33945896_33969236
transcript_132496.known	chr21	-	673	3	FSM	ENSG00000241837.7	ENST00000496044.5	673	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	2567	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCCACAGCTCTTTATTC	-33868856	False	NA	NA	False	TTTAAA	-35	NA	33915724	33912366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_33912400_33914449_33914501_33915135
transcript_132497.known	chr21	+	728	2	FSM	ENSG00000237945.8	ENST00000599421.1	728	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTGAAGTTTTTCTTT	33930657	True	NA	5	True	ATTAAA	-16	NA	33931162	33938372	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_33931743_33938224
transcript_132498.known	chr21	-	591	2	FSM	ENSG00000273102.2	ENST00000607953.2	592	2	0	1	0	-1	multi-exon	FALSE	canonical	3	35	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGCTATTTGGTAATACG	NA	False	NA	-14	True	AATAAA	-18	NA	33968573	33967100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_33967351_33968232
transcript_132500.known	chr21	+	1061	5	FSM	ENSG00000243927.6	ENST00000477091.5	1061	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	373.093151907134	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGTGTTTTGTCCCTTTA	34051334	True	NA	19	True	AATAAA	-19	NA	34073548	34143034	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_34073746_34102834_34102909_34103496_34103520_34125340_34125481_34142407
transcript_132505.known	chr21	+	931	3	FSM	ENSG00000243927.6	ENST00000399312.3	931	3	0	0	0	0	multi-exon	FALSE	canonical	3	860	junction_1	22	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGAGGTGTTTTGTCCC	34051363	True	NA	15	True	AATAAA	-15	NA	34073577	34143030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_34073746_34125340_34125481_34142407
transcript_132506.known	chr21	+	11566	2	FSM	ENSG00000198743.7	ENST00000381151.5	11566	2	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTGTGACTAAGTATT	34051363	True	NA	12	True	AATAAA	-13	NA	34073577	34106260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_34073746_34094862
transcript_132509.known	chr21	-	2643	3	FSM	ENSG00000225555.2	ENST00000440403.2	2643	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTAGTTCTATATAAAAA	NA	False	NA	NA	False	AAAACA	-16	NA	34375364	34353098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_34354888_34370434_34371161_34375236
transcript_13251.known	chr1	+	1260	2	FSM	ENSG00000277147.7	ENST00000620190.1	1260	2	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTTTAAAATTACATTGG	149606526	True	NA	3	True	AATAAA	-17	NA	149607306	149647610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_149607555_149646598
transcript_132510.known	chr21	+	840	4	FSM	ENSG00000205670.12	ENST00000399292.8	840	4	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_3	3.29983164553722	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCGTGGCCTTTGGAAT	NA	False	NA	NA	False	AATAAA	-18	NA	34375506	34389151	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_34375568_34379427_34379517_34385477_34385645_34388628
transcript_132513.known	chr21	+	1220	5	FSM	ENSG00000205670.12	ENST00000481710.5	1220	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	88.3130086680326	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTTTTACAGTTTTCAT	NA	False	NA	NA	False	AATAAA	-29	NA	34375479	34402777	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_34375568_34379427_34379517_34385477_34385645_34399710_34399900_34402090
transcript_132515.known	chr21	+	780	4	FSM	ENSG00000205670.12	ENST00000489469.5	780	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	85.1129967879302	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAACCCAGTTCTCGCAG	NA	False	NA	NA	False	AGTAAA	-28	NA	34375508	34400175	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_34375568_34379427_34379517_34385477_34385645_34399710
transcript_132516.known	chr21	-	2503	4	FSM	ENSG00000159200.18	ENST00000313806.9	2503	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	1.24721912892465	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCAGTTTAAAAGGCTT	-34614933	False	180	41	True	AATAAA	-18	NA	34615113	34516441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_34518257_34521498_34521659_34523536_34523711_34614759
transcript_132519.known	chr21	+	4197	6	FSM	ENSG00000159212.13	ENST00000349499.3	4197	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	1.85472369909914	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATTTCTTTTGGGTTTTA	34668698	True	NA	9	True	TATAAA	-16	NA	34668993	34718223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_34670763_34707279_34707390_34707943_34708070_34708699_34708807_34709356_34709539_34716320
transcript_13252.known	chr1	-	549	1	FSM	ENSG00000288825.1	ENST00000369159.3	533	1	14	-30	14	30	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTCTCAGTCCAGCGTT	NA	False	NA	NA	False	AATAAA	-17	NA	149842736	149842187	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_149842200_149842700
transcript_132521.known	chr21	+	2632	3	FSM	ENSG00000234380.2	ENST00000420877.1	2632	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGATGGAGATAGCAGAA	34745689	True	NA	NA	False	NA	NA	NA	34745756	34784886	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_34746017_34782124_34782191_34782580
transcript_132522.known	chr21	+	767	2	FSM	ENSG00000234380.2	ENST00000419921.1	767	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGGAAGGAGACGCATTT	34745769	True	NA	NA	False	ACTAAA	-10	NA	34745836	34748367	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_34746017_34747780
transcript_132523.known	chr21	+	1048	2	FSM	ENSG00000231106.3	ENST00000457157.3	1249	2	201	0	201	0	multi-exon	TRUE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGCCAGTTCGAATTAAT	NA	False	NA	NA	False	AATAAA	-17	NA	36005337	36007838	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_36005866_36007318
transcript_13253.known	chr1	+	564	1	FSM	ENSG00000288859.1	ENST00000607355.3	534	1	0	-30	0	30	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTCTCAGTCCAGCGTT	NA	False	NA	NA	False	AATAAA	-17	NA	149851060	149851624	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_149851100_149851600
transcript_13254.known	chr1	-	1132	1	FSM	ENSG00000270276.3	ENST00000579512.3	396	1	-51	-685	-51	685	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTATGAGATAACTGTCT	NA	False	NA	NA	False	AATAAA	-22	NA	149861210	149860078	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_149860100_149861200
transcript_13255.known	chr1	-	1694	2	FSM	ENSG00000270276.3	ENST00000612061.1	1694	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACTGAGATACATAGTAAA	NA	False	NA	NA	False	AATAAA	-20	NA	149861148	149859184	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_149859682_149859951
transcript_13256.known	chr1	+	1234	1	FSM	ENSG00000264207.1	ENST00000577853.1	1234	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGCCCTGTTTAATC	NA	False	NA	NA	False	TTTAAA	-5	NA	149861270	149862504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_149861300_149862500
transcript_132565.known	chr21	-	2991	12	FSM	ENSG00000185917.14	ENST00000332131.9	2991	12	0	0	0	0	multi-exon	TRUE	canonical	3	86	junction_5	95.8969832943596	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTCATTGTGCTTTCCT	-36057237	True	NA	-14	True	ATTAAA	-17	NA	36060526	36034540	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_36035961_36036084_36036252_36038149_36038274_36040574_36040656_36041806_36041889_36043781_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36058815_36058925_36060346
transcript_13257.known	chr1	-	2194	1	FSM	ENSG00000184678.11	ENST00000369155.4	2224	1	30	0	30	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTGCTGGATTCTTTTA	-149866280	False	NA	-3	True	AATAAA	-19	NA	149886652	149884458	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_149884500_149886700
transcript_13258.known	chr1	+	494	1	FSM	ENSG00000184260.6	ENST00000331380.4	494	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTTTTCAAAAAAAGAGCTA	149835639	True	NA	41	True	NA	NA	NA	149886917	149887411	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_149886900_149887400
transcript_13259.known	chr1	+	891	2	FSM	ENSG00000178096.9	ENST00000369152.6	891	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGTTCTTAATGGACT	149899067	True	NA	16	True	ATTAAA	-17	NA	149899567	149900795	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_149899673_149900009
transcript_13260.known	chr1	+	743	2	FSM	ENSG00000178096.9	ENST00000476344.1	743	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTCTTAATGGACTGCT	149899105	True	NA	19	True	ATTAAA	-20	NA	149899605	149900798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_149899673_149900122
transcript_132609.nic	chr21	-	1561	7	ISM	ENSG00000185917.14	ENST00000332131.9	2991	12	-348	9145	-348	0	5prime_fragment	FALSE	canonical	3	300	junction_5	41.7119753654618	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACTGACATACATATCAC	NA	False	NA	-9	True	AATAAA	-15	NA	36060874	36043685	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_-_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36058815_36058925_36060346
transcript_13261.nic	chr1	+	1045	2	ISM	ENSG00000178096.9	ENST00000369153.2	1096	3	11685	-298	7	-6	3prime_fragment	FALSE	canonical	2	5	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGAGGCTGTGTTCTTAA	149899074	True	NA	10	True	ATTAAA	-11	NA	149899574	149900789	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_149899673_149899842
transcript_132611.known	chr21	-	1165	7	FSM	ENSG00000185917.14	ENST00000399208.6	1165	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	133.701159306866	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACTGACATACATATCAC	-36060350	False	NA	-9	True	AATAAA	-15	NA	36060364	36043685	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36058815_36058974_36060281
transcript_13262.known	chr1	+	811	2	FSM	ENSG00000178096.9	ENST00000369150.1	811	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGGATTTGTAAGGGATG	149899125	True	NA	NA	False	NA	NA	NA	149899625	149900548	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_149899731_149899842
transcript_132635.known	chr21	+	838	3	FSM	ENSG00000159228.13	ENST00000399191.3	838	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1184.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCACTGAGGAGGAGCTGG	36047309	True	NA	NA	False	NA	NA	NA	36070034	36072533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_36070405_36070949_36071058_36072173
transcript_132636.known	chr21	+	1208	3	FSM	ENSG00000159228.13	ENST00000290349.11	1208	3	0	0	0	0	multi-exon	FALSE	canonical	3	2371	junction_1	18	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTTGTACAGATTGTTT	36047298	True	NA	31	True	AATAAA	-17	NA	36070023	36073164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_36070405_36070949_36071058_36072445
transcript_132641.known	chr21	+	1024	2	FSM	ENSG00000159228.13	ENST00000439427.2	1024	2	0	0	0	0	multi-exon	FALSE	canonical	3	2371	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTAAGTCGTTTGGGACAC	36047289	True	NA	NA	False	NA	NA	NA	36070014	36071583	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_36070405_36070949
transcript_132642.known	chr21	+	2336	2	FSM	ENSG00000233393.2	ENST00000422473.1	2336	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCAGTGTCTGAGGAGTT	36102794	True	NA	2	True	AGTAAA	-15	NA	36104880	36109690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_36105124_36107597
transcript_132645.known	chr21	+	1924	3	FSM	ENSG00000159228.13	ENST00000530908.5	1924	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1185	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTACAGATTGTTTAG	36047215	True	NA	33	True	AATAAA	-19	NA	36069940	36073166	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_36070405_36070949_36071058_36071814
transcript_132646.known	chr21	+	998	3	FSM	ENSG00000159231.6	ENST00000290354.6	998	3	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	2	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTGATGCTGTGGTTTG	36133845	True	NA	NA	False	AATAAA	-20	NA	36135078	36146562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_36135482_36137824_36137933_36146075
transcript_132648.known	chr21	+	4224	17	FSM	ENSG00000159256.13	ENST00000400485.6	4224	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	21.4810963407364	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTCAAATGCTACTTTTA	36318407	True	NA	11	True	AATAAA	-22	NA	36320196	36376632	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_36320304_36333645_36333719_36336873_36337007_36337731_36337947_36338773_36338922_36341398_36341547_36344578_36344708_36344911_36345032_36349310_36349409_36356619_36356725_36359954_36360078_36360183_36360259_36362182_36362229_36364092_36364260_36368987_36369877_36372373_36372532_36375142
transcript_132652.known	chr21	+	4131	16	FSM	ENSG00000159256.13	ENST00000487909.5	4131	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	28.5485940498341	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTAAAGACTTAATATTA	36318441	True	NA	25	True	AATAAA	-36	NA	36320230	36376646	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_36320304_36336873_36337007_36337731_36337947_36338773_36338922_36341398_36341547_36344578_36344708_36344911_36345032_36349310_36349409_36356619_36356725_36359954_36360078_36360183_36360259_36362182_36362229_36364092_36364260_36368987_36369877_36372373_36372532_36375142
transcript_132661.known	chr21	+	4466	14	FSM	ENSG00000159259.8	ENST00000314103.6	4466	14	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_11	24.0876112919376	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAGTGTCATAGTCTAAA	36381484	True	NA	15	True	AATAAA	-17	NA	36385391	36419015	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_36385452_36386059_36386263_36387597_36387731_36391550_36391669_36394546_36394651_36397414_36397512_36399520_36399606_36402757_36402852_36408760_36408831_36409373_36409466_36411462_36411605_36412883_36413316_36415294_36415390_36416274
transcript_132668.nic	chr21	+	1478	12	ISM	ENSG00000159256.13	ENST00000400485.6	4224	17	-7	16377	1	206	5prime_fragment	TRUE	canonical	0	0	junction_4	24.3021612479696	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGTGAGTGTTGTATTGAT	36318400	True	NA	NA	False	NA	NA	NA	36320189	36360255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_36320304_36333645_36333719_36336873_36337007_36337731_36337947_36338773_36338922_36341398_36341547_36344578_36344708_36344911_36345032_36349310_36349409_36356619_36356725_36359954_36360078_36360183
transcript_132672.nic	chr21	+	2154	12	NIC	ENSG00000159259.8	novel	4466	14	NA	NA	-40	-2190	combination_of_known_junctions	FALSE	canonical	1	5	junction_8	62.8784738947984	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGTGTTTGTTTTCTGA	36381444	True	NA	26	True	ATTAAA	-11	NA	36385351	36416825	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_+_36385452_36386059_36386263_36387597_36387731_36391550_36391669_36394546_36394651_36397414_36397512_36399520_36399606_36402757_36402852_36411462_36411605_36412883_36413316_36415294_36415390_36416274
transcript_132676.nic	chr21	+	1736	7	NIC	ENSG00000159259.8	novel	1152	6	NA	NA	-40	484	combination_of_known_junctions	FALSE	canonical	3	19	junction_6	76.3007572410363	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTCTTGTTGTCGTGTTT	36381444	True	NA	7	True	AATAAA	-23	NA	36385351	36398723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_+_36385452_36386059_36386263_36387597_36387731_36391550_36391669_36394546_36394651_36397414_36397512_36397742
transcript_132679.known	chr21	-	6466	12	FSM	ENSG00000159267.17	ENST00000399120.5	6466	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	18.5930761128664	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGGCTCCCTCTTATTT	-36966088	False	NA	-1	True	AATAAA	-18	NA	36966473	36751191	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_36754418_36756541_36756756_36759726_36759842_36765011_36765173_36767217_36767286_36896859_36897132_36930250_36930434_36936448_36937393_36938831_36938995_36947332_36948288_36962035_36962171_36966443
transcript_13268.known	chr1	-	4378	13	FSM	ENSG00000159164.10	ENST00000369146.8	4378	13	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_6	18.273196825466	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTATACCTGCTTCTGTG	-149900983	False	16861	49	True	AATAAA	-28	NA	149917844	149903317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_149905198_149905879_149906040_149906649_149906857_149907699_149907834_149908041_149908207_149909191_149909281_149909460_149909572_149909800_149909891_149910569_149910704_149910825_149910978_149911799_149911981_149913218_149914188_149917738
transcript_132686.known	chr21	-	8273	11	FSM	ENSG00000159267.17	ENST00000674895.3	8273	11	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_10	10.5114223585583	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTGAATGACTTTTAAAG	-36966284	True	NA	-16	True	AATAAA	-17	NA	36966669	36748625	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_36754418_36756541_36756756_36759726_36759842_36765011_36765173_36767217_36767286_36896859_36897132_36930250_36930434_36936448_36937393_36938831_36938995_36962035_36962171_36966443
transcript_132687.nic	chr21	-	4120	11	NIC	ENSG00000159267.17	novel	6010	12	NA	NA	0	-560	combination_of_known_junctions	FALSE	canonical	3	18	junction_10	11.3494493258484	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTCTTCTCCAAATGCCC	-36989893	True	NA	NA	False	AAAACA	-25	NA	36990236	36752631	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_36754418_36756541_36756756_36759726_36759842_36765011_36765173_36767217_36767286_36896859_36897132_36930250_36930434_36936448_36937393_36938831_36938995_36962035_36962171_36990157
transcript_132695.nic	chr21	-	2606	11	NIC	ENSG00000159267.17	novel	6010	12	NA	NA	4	-2068	combination_of_known_junctions	FALSE	canonical	3	18	junction_10	11.3494493258484	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTCTTTTTCTGTGTTT	-36989887	True	NA	NA	False	NA	NA	NA	36990230	36754139	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_36754418_36756541_36756756_36759726_36759842_36765011_36765173_36767217_36767286_36896859_36897132_36930250_36930434_36936448_36937393_36938831_36938995_36962035_36962171_36990157
transcript_132707.known	chr21	+	2005	4	FSM	ENSG00000183145.9	ENST00000485272.5	2005	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4.98887651569859	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTTTGATAATCACCCT	37006130	False	NA	5	True	AATAAA	-11	NA	37006149	37019659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_37006234_37008156_37008224_37013550_37013619_37017873
transcript_132708.known	chr21	+	2099	4	FSM	ENSG00000183145.9	ENST00000329553.3	2099	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	1.88561808316413	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGATAATCACCCTTTT	37006543	True	NA	8	True	AATAAA	-14	NA	37006701	37019662	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_37006877_37008156_37008224_37013550_37013619_37017873
transcript_132709.known	chr21	-	972	6	FSM	ENSG00000185808.14	ENST00000399098.5	972	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	59.4252471597721	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGCAGACTTAAAAAAAAAA	-37071489	True	NA	-4	True	AATAAA	-21	NA	37073170	37065373	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_37065713_37067261_37067381_37069551_37069625_37072144_37072311_37072433_37072538_37072999
transcript_132713.known	chr21	-	656	5	FSM	ENSG00000185808.14	ENST00000399103.5	656	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	68.2362623536782	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGCAGACTTAAAAAAAAAA	-37071330	True	NA	-4	True	AATAAA	-21	NA	37073011	37065373	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_37065713_37067261_37067381_37069551_37069625_37072433_37072538_37072990
transcript_132723.known	chr21	+	3771	33	FSM	ENSG00000182670.13	ENST00000418766.5	3771	33	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	29.2050937337992	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGGAAGAAGAAAAA	37070055	True	NA	NA	False	NA	NA	NA	37073250	37165751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_37073474_37087246_37087402_37087832_37087876_37088195_37088347_37088798_37088887_37090232_37090287_37091292_37091414_37094004_37094091_37095349_37095445_37096580_37096644_37108391_37108447_37121816_37121980_37122982_37123029_37124618_37124743_37126079_37126144_37129002_37129064_37132681_37132767_37135379_37135515_37138633_37138715_37140560_37140674_37144524_37144646_37147480_37147604_37148545_37148648_37150077_37150171_37150819_37150885_37151892_37152030_37152950_37153278_37156654_37156907_37159698_37159746_37160801_37160859_37161989_37162064_37164050_37164216_37165549
transcript_132730.known	chr21	+	2451	26	FSM	ENSG00000182670.13	ENST00000450533.5	2451	26	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	30.2973002097547	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGTTAGCACAAGAAAGAA	37070071	True	NA	NA	False	AAAAAG	-8	NA	37073266	37151958	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_37073365_37087246_37087402_37087832_37087876_37088195_37088347_37088798_37088887_37090232_37090287_37091292_37091414_37094004_37094091_37095349_37095445_37096580_37096644_37108391_37108447_37121816_37121980_37122982_37123029_37124618_37124743_37126079_37126144_37129002_37129064_37132681_37132767_37135379_37135515_37138633_37138715_37140560_37140674_37144524_37144646_37147480_37147604_37148545_37148648_37150077_37150171_37150819_37150885_37151892
transcript_132735.nic	chr21	+	3062	24	NIC	ENSG00000182670.13	novel	3626	32	NA	NA	-217	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	15.4890045761477	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAACATTAAAACAAAAG	37072994	False	NA	NA	False	AAAAAG	-7	NA	37073008	37165765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_+_37073365_37108391_37108447_37121816_37121980_37122982_37123029_37124618_37124743_37126079_37126144_37129002_37129064_37132681_37132767_37135379_37135515_37138633_37138715_37140560_37140674_37144524_37144646_37147480_37147604_37148545_37148648_37150077_37150171_37150819_37150885_37151892_37152030_37152950_37153278_37156654_37156907_37159698_37159746_37160801_37160859_37161989_37162064_37164050_37164216_37165549
transcript_132741.nic	chr21	+	2550	20	NIC	ENSG00000182670.13	novel	3626	32	NA	NA	-217	-5895	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	16.8256498559429	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTACTTGGATCACTT	37072994	False	NA	NA	False	NA	NA	NA	37073008	37159745	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_+_37073365_37108391_37108447_37121816_37121980_37122982_37123029_37124618_37124743_37126079_37126144_37129002_37129064_37132681_37132767_37135379_37135515_37138633_37138715_37140560_37140674_37144524_37144646_37147480_37147604_37148545_37148648_37150077_37150171_37150819_37150885_37151892_37152030_37152950_37153278_37156654_37156907_37159698
transcript_132743.nic	chr21	+	1853	17	ISM	ENSG00000182670.13	ENST00000540756.5	2025	18	-272	1365	-217	0	5prime_fragment	FALSE	canonical	3	38	junction_1	16.8411697930993	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGTTAGCACAAGAAAGAA	37072994	False	NA	NA	False	AAAAAG	-8	NA	37073008	37151958	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_37073365_37108391_37108447_37121816_37121980_37122982_37123029_37124618_37124743_37126079_37126144_37129002_37129064_37132681_37132767_37135379_37135515_37138633_37138715_37140560_37140674_37144524_37144646_37147480_37147604_37148545_37148648_37150077_37150171_37150819_37150885_37151892
transcript_132745.nic	chr21	+	1570	16	ISM	ENSG00000182670.13	ENST00000540756.5	2025	18	-55	2439	0	-1074	5prime_fragment	FALSE	canonical	3	38	junction_1	16.3742345028876	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGATTTTTAACAATCAA	37070030	True	NA	NA	False	AAGAAA	-41	NA	37073225	37150884	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_37073365_37108391_37108447_37121816_37121980_37122982_37123029_37124618_37124743_37126079_37126144_37129002_37129064_37132681_37132767_37135379_37135515_37138633_37138715_37140560_37140674_37144524_37144646_37147480_37147604_37148545_37148648_37150077_37150171_37150819
transcript_132760.known	chr21	-	3056	8	FSM	ENSG00000157538.14	ENST00000309117.11	3056	8	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_4	29.849281261644	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGACTGCTTTCCTTAGAG	-37262913	True	NA	NA	False	AATAAA	-20	NA	37267334	37223421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_37225627_37227653_37227807_37228222_37228374_37232376_37232452_37233361_37233443_37238459_37238610_37240495_37240640_37267237
transcript_132762.known	chr21	-	937	7	FSM	ENSG00000157538.14	ENST00000476950.5	937	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	94.0703046780557	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTACAGCCAGCGGCATAT	-37262925	True	NA	-73	True	NA	NA	NA	37267346	37225471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_37225627_37227653_37227807_37228222_37228374_37232376_37232452_37238459_37238610_37240495_37240640_37267237
transcript_132765.known	chr21	-	821	5	FSM	ENSG00000157538.14	ENST00000399001.5	821	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	115.67194992737	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATTTCACAGAAAACATTG	-37262930	True	NA	-20	True	NA	NA	NA	37267351	37225298	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_37225627_37227653_37227807_37228222_37228374_37232376_37232452_37267237
transcript_132767.known	chr21	-	959	2	FSM	ENSG00000157538.14	ENST00000498789.1	959	2	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTATTCCTGGGCCTG	-37262919	True	NA	-7	True	ATTAAA	-18	NA	37267340	37261081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_37261938_37267237
transcript_132771.known	chr21	-	1868	12	FSM	ENSG00000157554.20	ENST00000398919.6	1868	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	2.59688306492467	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTGGGGAAGGAAGCCGG	-38660579	False	174	NA	False	AAAAAG	-9	NA	38660667	38383290	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_38383924_38390994_38391043_38391658_38391716_38392375_38392445_38400573_38400646_38402556_38402638_38403505_38403710_38423409_38423562_38445403_38445622_38575661_38575748_38584843_38584946_38660521
transcript_132772.known	chr21	-	5023	12	FSM	ENSG00000157554.20	ENST00000417133.6	5023	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	2.55193979047604	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCCTTCTTTTTATC	-38661606	True	NA	NA	False	AATAAA	-33	NA	38661694	38380026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_38383924_38390994_38391043_38391658_38391716_38392375_38392445_38400573_38400646_38402556_38402638_38403505_38403710_38423409_38423562_38445403_38445622_38575661_38575748_38584843_38584946_38661657
transcript_132776.known	chr21	+	3668	10	FSM	ENSG00000157557.13	ENST00000360938.8	3668	10	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_7	12.7055932079314	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGTGATAGTCCTCGT	38797392	True	NA	NA	False	AATAAA	-19	NA	38805928	38824955	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_38806121_38810034_38810107_38813002_38813115_38814272_38814393_38814780_38814982_38817007_38817092_38818424_38818647_38819502_38819767_38821585_38821705_38822673
transcript_13279.known	chr1	-	2903	12	FSM	ENSG00000159164.10	ENST00000369145.1	2903	12	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_5	15.6733178543021	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGGAAA	-149900980	False	16861	NA	False	NA	NA	NA	149917841	149905471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_149906040_149906649_149906857_149907699_149907834_149908041_149908207_149909191_149909281_149909460_149909572_149909800_149909891_149910569_149910704_149910825_149910978_149911799_149911981_149913218_149914188_149917738
transcript_132790.known	chr21	-	1754	7	FSM	ENSG00000183527.12	ENST00000331573.8	1754	7	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_3	80.745828925641	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACCACAAACTGAACTGCA	-39173930	True	NA	NA	False	NA	NA	NA	39183451	39174768	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_39175665_39177434_39177572_39178448_39178648_39179923_39179987_39180284_39180437_39181771_39181879_39183251
transcript_132792.known	chr21	-	760	6	FSM	ENSG00000183527.12	ENST00000431628.1	760	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_5	346.513260929506	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAAACATTGTTTTGTAG	-39183373	False	NA	NA	False	AAGAAA	-43	NA	39183385	39175589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_39175665_39177434_39177572_39178448_39178648_39179923_39179987_39180284_39180437_39183251
transcript_132793.known	chr21	-	907	6	FSM	ENSG00000183527.12	ENST00000380900.2	907	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	367.230499822659	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAAACATTGTTTTGTAG	-39173967	True	NA	NA	False	AAGAAA	-43	NA	39183488	39175589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_39175665_39177434_39177572_39178448_39178648_39180284_39180437_39181771_39181879_39183251
transcript_132795.known	chr21	-	17728	41	FSM	ENSG00000185658.14	ENST00000342449.8	17728	41	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_18	48.2231207513574	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCATGGGGTTTGATTTT	-39305387	True	NA	-5	True	AATAAA	-16	NA	39313632	39185481	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_39197416_39198762_39199663_39200218_39200387_39202324_39202546_39206107_39206275_39209994_39210148_39210785_39210930_39212665_39212708_39213480_39213554_39215236_39215363_39218151_39218273_39218504_39218661_39224407_39224470_39225085_39225198_39228499_39228583_39229311_39229437_39232176_39232285_39232372_39232499_39236594_39236785_39238478_39238574_39247700_39247833_39250795_39250890_39255644_39255829_39258486_39258673_39264459_39264686_39264890_39265020_39269898_39270034_39270282_39270434_39274373_39274473_39276172_39276214_39277250_39277352_39278742_39278814_39280147_39280249_39293810_39294033_39295742_39295904_39296264_39296364_39298431_39298583_39312840_39312901_39313071_39313102_39313240_39313300_39313442
transcript_132805.nnic	chr21	-	2951	24	NNC	ENSG00000185658.14	novel	17728	41	NA	NA	0	107	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	68.3602986738839	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGCCTAAGAAGGAGGTAA	-39305387	True	NA	20	True	AAAAAG	-25	NA	39313632	39236610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr21_-_39236785_39238478_39238574_39247700_39247833_39250795_39250890_39255644_39255829_39258486_39258673_39264459_39264686_39264890_39265020_39269898_39270034_39270282_39270434_39274373_39274473_39276172_39276214_39277250_39277352_39278742_39278814_39280147_39280249_39288767_39288828_39293810_39294033_39295742_39295904_39296264_39296364_39298431_39298583_39312840_39312901_39313071_39313102_39313240_39313300_39313442
transcript_132809.nic	chr21	-	3211	23	ISM	ENSG00000185658.14	ENST00000380800.7	7605	42	-362	42794	-133	107	5prime_fragment	FALSE	canonical	3	71	junction_8	62.8046295077306	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGCCTAAGAAGGAGGTAA	-39313939	False	NA	20	True	AAAAAG	-25	NA	39313952	39236610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_-_39236785_39238478_39238574_39247700_39247833_39250795_39250890_39255644_39255829_39258486_39258673_39264459_39264686_39264890_39265020_39269898_39270034_39270282_39270434_39274373_39274473_39276172_39276214_39277250_39277352_39278742_39278814_39280147_39280249_39293810_39294033_39295742_39295904_39296264_39296364_39298431_39298583_39312840_39312901_39313071_39313102_39313240_39313300_39313442
transcript_132810.nic	chr21	-	2871	23	NIC	ENSG00000185658.14	novel	17728	41	NA	NA	0	107	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	66.4760100890191	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGCCTAAGAAGGAGGTAA	-39305387	True	NA	20	True	AAAAAG	-25	NA	39313632	39236610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_39236785_39238478_39238574_39247700_39247833_39250795_39250890_39255664_39255829_39258486_39258673_39264459_39264686_39264890_39265020_39269898_39270034_39270282_39270434_39274373_39274473_39276172_39276214_39277250_39277352_39278742_39278814_39280147_39280249_39293810_39294033_39295742_39295904_39296264_39296364_39298431_39298583_39312840_39312901_39313071_39313102_39313240_39313300_39313442
transcript_132816.nic	chr21	-	2478	20	ISM	ENSG00000185658.14	ENST00000380800.7	7605	42	-52	57001	0	-14099	5prime_fragment	FALSE	canonical	3	71	junction_5	66.4428607121351	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCTTCAGCTCTCACATA	-39305397	True	NA	NA	False	AAAAAG	-4	NA	39313642	39250817	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_-_39250890_39255644_39255829_39258486_39258673_39264459_39264686_39264890_39265020_39269898_39270034_39270282_39270434_39274373_39274473_39276172_39276214_39277250_39277352_39278742_39278814_39280147_39280249_39293810_39294033_39295742_39295904_39296264_39296364_39298431_39298583_39312840_39312901_39313071_39313102_39313240_39313300_39313442
transcript_132817.known	chr21	-	2495	5	FSM	ENSG00000185658.14	ENST00000341322.4	2495	5	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_4	5.80409338312195	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTAAGTATTCTATAAAATC	-39305397	True	NA	39	True	AATAAA	-18	NA	39313642	39296436	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_39298583_39312840_39312901_39313071_39313102_39313240_39313300_39313442
transcript_132824.known	chr21	-	1552	8	FSM	ENSG00000205581.11	ENST00000431390.5	1552	8	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	2443.93363916721	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGAAGCACATGGATTAA	-39255565	True	NA	-2	True	AATAAA	-19	NA	39349140	39342314	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_39343160_39345145_39345275_39345829_39345959_39347378_39347479_39348291_39348340_39348421_39348452_39348544_39348578_39348902
transcript_132828.known	chr21	-	1303	7	FSM	ENSG00000205581.11	ENST00000288344.14	1303	7	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_3	2272.36814799011	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGAAGCACATGGATTAA	-39348937	False	NA	-2	True	AATAAA	-19	NA	39348991	39342314	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_39343160_39345145_39345275_39345829_39345959_39348291_39348340_39348421_39348452_39348544_39348578_39348902
transcript_132831.known	chr21	-	850	7	FSM	ENSG00000205581.11	ENST00000419378.5	850	7	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_3	2289.8126560922	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATGGCAATATGGAGTC	-39255465	True	NA	-37	True	AATACA	-8	NA	39349040	39342787	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_39343160_39345145_39345275_39347378_39347479_39348291_39348340_39348421_39348452_39348544_39348578_39348902
transcript_132832.known	chr21	-	1045	7	FSM	ENSG00000205581.11	ENST00000436324.5	1045	7	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_3	2273.53767410077	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGTAACATCTTTGTGG	-39255513	True	NA	-92	True	AAGAAA	-42	NA	39349088	39342645	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_39343160_39345145_39345275_39347378_39347484_39348291_39348340_39348421_39348452_39348544_39348578_39348902
transcript_132837.known	chr21	-	1271	6	FSM	ENSG00000205581.11	ENST00000380749.10	1271	6	0	0	0	0	multi-exon	FALSE	canonical	3	4768	junction_5	422.739446941021	991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGAAGCACATGGATTAA	-39255513	True	NA	-2	True	AATAAA	-19	NA	39349088	39342314	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_39343160_39345145_39345275_39348291_39348340_39348421_39348452_39348544_39348578_39348902
transcript_132838.known	chr21	-	508	5	FSM	ENSG00000205581.11	ENST00000464078.5	508	5	0	0	0	0	multi-exon	FALSE	canonical	3	4768	junction_4	430.390157299165	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAAAGAAGCCAAGTCTG	-39255479	True	NA	NA	False	NA	NA	NA	39349054	39343136	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_39343160_39345145_39345275_39348291_39348340_39348421_39348578_39348902
transcript_132841.known	chr21	-	4299	5	FSM	ENSG00000205581.11	ENST00000486741.5	4299	5	0	0	0	0	multi-exon	FALSE	canonical	3	4768	junction_4	459.574463498572	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGAAGCACATGGATTAA	-39255524	True	NA	-2	True	AATAAA	-19	NA	39349099	39342314	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_39343160_39345145_39348340_39348421_39348452_39348544_39348578_39348902
transcript_132842.nic	chr21	-	414	5	ISM	ENSG00000205581.11	ENST00000380749.10	1271	6	-84	2927	-32	1905	5prime_fragment	FALSE	canonical	3	4768	junction_4	221.798754505069	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAAAAGGGGAGCAAAGGG	-39349118	False	NA	NA	False	GATAAA	-28	NA	39349172	39345241	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_-_39345275_39348291_39348340_39348421_39348452_39348544_39348578_39348902
transcript_132846.known	chr21	+	1328	9	FSM	ENSG00000285815.1	ENST00000647779.1	1328	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	132.76759534992	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTCCCAAGGAGCATCA	39376234	True	NA	NA	False	AATAAA	-17	NA	39380331	39515506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_39380487_39390697_39390864_39391768_39391837_39462374_39462561_39475134_39475216_39499822_39499916_39508997_39509028_39511679_39511810_39515087
transcript_132851.known	chr21	+	1534	5	FSM	ENSG00000182093.16	ENST00000649170.1	1534	5	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_1	55.5939520091889	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGCAAGTTCATATTT	39376228	True	NA	5	True	AGTAAA	-18	NA	39380325	39397889	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_39380487_39390697_39390864_39391768_39391837_39393165_39393281_39396865
transcript_132856.known	chr21	+	699	5	FSM	ENSG00000182093.16	ENST00000398753.5	699	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	171.03855559493	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTGTCATTGAGCCAAG	39380230	False	NA	NA	False	NA	NA	NA	39380457	39397116	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_39380557_39390697_39390864_39391768_39391837_39393165_39393281_39396865
transcript_13286.known	chr1	-	1544	6	FSM	ENSG00000143368.10	ENST00000271628.9	1544	6	0	0	0	0	multi-exon	FALSE	canonical	3	1243	junction_5	153.723908355207	459	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGTGTTTTCCTTGAC	-149910942	True	NA	-20	True	AATAAA	-18	NA	149927803	149923316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_149923730_149923840_149924015_149925835_149926043_149926375_149926919_149927165_149927295_149927725
transcript_132860.known	chr21	+	1464	5	FSM	ENSG00000182093.16	ENST00000380708.5	1464	5	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	105.831233574971	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGCAAGTTCATATTT	39386609	True	NA	5	True	AGTAAA	-18	NA	39387764	39397889	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_39387856_39390697_39390864_39391768_39391837_39393165_39393281_39396865
transcript_132863.known	chr21	+	1416	5	FSM	ENSG00000182093.16	ENST00000466787.1	1416	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	167.840698282627	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATATTGCCAACTGGAAA	39386635	True	NA	NA	False	NA	NA	NA	39387790	39397254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_39387856_39390697_39391477_39391768_39391837_39393165_39393281_39396865
transcript_132864.known	chr21	+	1109	7	FSM	ENSG00000185437.15	ENST00000333634.10	1109	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	8.47381587925744	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTGTCCCAAGGAGCAT	39451766	True	NA	NA	False	AATAAA	-15	NA	39451969	39515504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_39452142_39462374_39462561_39475134_39475216_39499822_39499916_39508997_39509028_39511679_39511810_39515087
transcript_132865.nic	chr21	+	4823	5	NIC	ENSG00000183778.19	novel	1825	5	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	2	17	junction_4	17.4982141945971	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAATGTCTGAAACAGAT	39612799	True	NA	8	True	TTTAAA	-5	NA	39612910	39673118	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_+_39613068_39646391_39646623_39659752_39659913_39660559_39663617_39671900
transcript_132867.known	chr21	+	1347	4	FSM	ENSG00000183778.19	ENST00000684187.2	13097	4	105	11645	0	0	multi-exon	FALSE	canonical	3	36	junction_2	12.9614813968157	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGAGCCCAGAGGCACATC	39613025	False	NA	NA	False	NA	NA	NA	39613044	39661492	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_39613068_39646391_39646623_39659752_39659913_39660559
transcript_132874.known	chr21	+	1290	3	FSM	ENSG00000183778.19	ENST00000615480.5	1290	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	27	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGGGGCGGGACAGAGGA	39609896	True	NA	NA	False	NA	NA	NA	39612939	39661561	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_39613068_39659752_39659913_39660559
transcript_132875.known	chr21	-	2340	5	FSM	ENSG00000184809.13	ENST00000670883.1	2340	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	93.0601284116888	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTAGTCTTGTGTATTT	-39612608	False	NA	NA	False	ATTAAA	-18	NA	39612646	39597146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_39597990_39599340_39600280_39601418_39601544_39609582_39609666_39612296
transcript_132876.known	chr21	-	1919	4	FSM	ENSG00000184809.13	ENST00000489821.5	1919	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	105.492495783665	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCCAGAACTATGAGTCAA	-39612354	False	NA	NA	False	NA	NA	NA	39612392	39597188	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_39597990_39599340_39600280_39609582_39609666_39612296
transcript_132877.known	chr21	-	3846	4	FSM	ENSG00000184809.13	ENST00000670049.1	3846	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	96.8744892459654	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCTTGAGGCCTCTCCA	-39611081	True	NA	NA	False	NA	NA	NA	39612857	39597202	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_39600280_39601418_39601544_39609582_39609666_39612296
transcript_132879.known	chr21	-	1071	3	FSM	ENSG00000184809.13	ENST00000380612.8	1071	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	104	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTAGTCTTGTGTATTT	-39612403	False	NA	NA	False	ATTAAA	-18	NA	39612441	39597146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_39597990_39609582_39609666_39612296
transcript_132881.nic	chr21	-	3804	3	NIC	ENSG00000184809.13	novel	2340	5	NA	NA	-8	0	intron_retention	FALSE	canonical	3	13	junction_1	108.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTAGTCTTGTGTATTT	-39612846	False	NA	NA	False	ATTAAA	-18	NA	39612884	39597146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_39600280_39609582_39609666_39612296
transcript_132882.nic	chr21	-	2041	3	ISM	ENSG00000184809.13	ENST00000489821.5	1919	4	-490	1719	-6	-1705	5prime_fragment	FALSE	canonical	3	13	junction_1	108.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCATGTTTTCTTCGCTTT	-39611106	True	NA	-2	True	AATAAA	-23	NA	39612882	39598907	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_-_39600280_39609582_39609666_39612296
transcript_132884.nnic	chr21	-	1751	3	NNC	ENSG00000184809.13	novel	4202	3	NA	NA	-6	30	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	110.5	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTCTAAATGTTTGACAT	-39611106	True	NA	-10	True	ATTAAA	-16	NA	39612882	39604103	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr21_-_39605186_39609582_39609666_39612296
transcript_132885.known	chr21	-	4202	3	FSM	ENSG00000184809.13	ENST00000661806.1	4202	3	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	68	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTAAAATAAATGCAAGGGA	-39612872	False	NA	-42	True	NA	NA	NA	39612910	39602842	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_39606348_39609582_39609666_39612296
transcript_132886.known	chr21	-	1823	3	FSM	ENSG00000184809.13	ENST00000380604.8	1823	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	91.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTAGCCGGGCGCGGT	-39612466	False	NA	NA	False	AATACA	-1	NA	39612504	39604470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_39606003_39609582_39609666_39612296
transcript_132887.known	chr21	-	3106	3	FSM	ENSG00000184809.13	ENST00000329618.7	3106	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	106.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATTATTATTAAAGTTCT	-39611100	True	NA	-40	True	NA	NA	NA	39612876	39604133	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_39606577_39609582_39609666_39612296
transcript_132914.known	chr21	+	534	3	FSM	ENSG00000183036.11	ENST00000328619.10	534	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAGTGACTGCCTTTCTT	39867313	True	NA	8	True	AATAAA	-21	NA	39867437	39929392	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_39867511_39898475_39898528_39928983
transcript_132915.known	chr21	+	8567	9	FSM	ENSG00000182240.16	ENST00000330333.11	8567	9	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_7	6.00910767086096	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTGCTTTTGGAATGTT	41167555	True	NA	NA	False	AATAAA	-36	NA	41168159	41282530	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_41168576_41226265_41226355_41237512_41237730_41241818_41241948_41243375_41243511_41245961_41246064_41250751_41250902_41257157_41257327_41275370
transcript_132917.known	chr21	+	2824	8	FSM	ENSG00000182240.16	ENST00000328735.10	2824	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	18.2343027264101	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACTAGCTTAGTTGTCT	41167744	True	NA	21	True	AATAAA	-30	NA	41167800	41276597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_41168576_41226265_41226355_41237512_41237730_41241818_41241948_41243375_41243511_41245961_41246064_41250751_41250902_41275370
transcript_132918.known	chr21	+	8764	8	FSM	ENSG00000182240.16	ENST00000347667.5	8764	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	18.3102513942996	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATACTCCCAACCTGTTGC	41167744	True	NA	NA	False	AATAAA	-24	NA	41167800	41282518	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_41168576_41226265_41226355_41237512_41237730_41241818_41241948_41243375_41243511_41245961_41246064_41257157_41257327_41275370
transcript_132919.nnic	chr21	+	1831	8	NIC	ENSG00000182240.16	novel	8567	9	NA	NA	-41	218	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	19.1300596881837	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTCATTCTAAACCAAAACA	41167514	True	NA	3	True	ATTAAA	-8	NA	41168118	41275842	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_+_41168576_41237512_41237730_41241818_41241948_41243375_41243511_41245961_41246064_41250751_41250902_41257157_41257327_41275370
transcript_132921.known	chr21	+	1317	8	FSM	ENSG00000183844.17	ENST00000357985.7	1317	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	4.22335585688414	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCCACGTCTGGCACCGG	41316509	True	NA	NA	False	NA	NA	NA	41316800	41357727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_41316899_41322922_41323067_41338377_41338502_41344475_41344535_41345685_41345737_41347012_41347101_41348591_41348725_41357107
transcript_132923.known	chr21	+	864	7	FSM	ENSG00000183844.17	ENST00000398647.7	864	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	5.31245915016974	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAATGATGTGATTCAAGC	41316522	True	NA	95	True	ACTAAA	-20	NA	41316813	41357431	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_41316899_41338377_41338502_41344475_41344535_41345685_41345737_41347012_41347101_41348591_41348725_41357107
transcript_132924.known	chr21	+	3509	14	FSM	ENSG00000183486.14	ENST00000680862.1	3509	14	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_4	2.67134697756698	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCCTGTATGTTTCAA	41370383	False	NA	NA	False	NA	NA	NA	41370451	41409329	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_41370646_41376835_41377156_41377788_41377982_41380016_41380152_41382409_41382565_41390564_41390704_41395586_41395786_41397612_41397692_41398896_41399020_41399195_41399338_41401969_41402129_41403266_41403344_41406743_41406999_41407990
transcript_132928.known	chr21	+	3653	18	FSM	ENSG00000157601.15	ENST00000679464.1	3653	18	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	6.81236409026044	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAAAAATTAGCTGGGT	NA	False	NA	NA	False	ACTAAA	-1	NA	41420278	41459637	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_41420441_41421837_41422096_41422755_41422912_41427754_41427867_41430532_41430609_41432049_41432176_41435836_41436030_41437014_41437153_41439693_41439849_41440886_41441026_41441715_41441915_41443787_41443867_41445447_41445571_41445999_41446142_41449136_41449296_41451166_41451244_41452620_41452870_41458527
transcript_132929.known	chr21	+	3256	17	FSM	ENSG00000157601.15	ENST00000679705.1	3256	17	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	5.699506557589	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAAAAATTAGCTGGGT	41425854	True	NA	NA	False	ACTAAA	-1	NA	41426100	41459637	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_41426162_41427205_41427305_41427754_41427867_41430532_41430609_41432030_41432176_41435836_41436030_41437014_41437153_41439693_41439849_41440886_41441026_41441715_41441915_41443787_41443867_41445447_41445571_41445999_41446142_41449136_41449296_41451166_41451244_41452620_41452870_41458527
transcript_132930.known	chr21	+	2776	17	FSM	ENSG00000157601.15	ENST00000398598.8	2776	17	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	4.27017271313468	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCTCTGCCATGTTTTG	41425992	True	NA	16	True	AATAAA	-16	NA	41426238	41459212	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_41426264_41427205_41427305_41427754_41427867_41430532_41430609_41432049_41432176_41435836_41436030_41437014_41437153_41439693_41439849_41440886_41441026_41441715_41441915_41443787_41443867_41445447_41445571_41445999_41446142_41449136_41449296_41451166_41451244_41452620_41452870_41458527
transcript_132932.known	chr21	+	3298	17	FSM	ENSG00000157601.15	ENST00000681671.1	3298	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAAAAATTAGCTGGGT	41426048	False	NA	NA	False	ACTAAA	-1	NA	41426294	41459637	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_41426398_41427205_41427305_41427754_41427867_41430532_41430609_41432030_41432176_41435836_41436030_41437014_41437153_41439693_41439849_41440886_41441026_41441715_41441915_41443787_41443867_41445447_41445571_41445999_41446142_41449136_41449296_41451166_41451244_41452620_41452870_41458527
transcript_132934.known	chr21	+	2303	16	FSM	ENSG00000157601.15	ENST00000417963.6	2303	16	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	5.53614386454045	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACACTCTGTCCAGCCCCG	41425931	True	NA	NA	False	NA	NA	NA	41426177	41458758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_41426264_41427754_41427867_41430532_41430609_41432030_41432176_41435836_41436030_41437014_41437153_41439693_41439849_41440886_41441026_41441715_41441915_41443787_41443867_41445447_41445571_41445999_41446142_41449136_41449296_41451166_41451244_41452620_41452870_41458527
transcript_132938.known	chr21	-	3945	14	FSM	ENSG00000184012.14	ENST00000679054.1	3945	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_13	20.9521856339676	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAGAAAGAAGTTTATTG	-41507538	True	NA	NA	False	AATAAA	-24	NA	41508146	41464304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_41466154_41467733_41467887_41468395_41468539_41470647_41470744_41471805_41471982_41473324_41473497_41476576_41476621_41479171_41479283_41480475_41480603_41488393_41488514_41489506_41489594_41494355_41494579_41498118_41498190_41507573
transcript_132939.known	chr21	-	1877	14	FSM	ENSG00000184012.14	ENST00000458356.6	1877	14	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_13	15.9470276950814	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCACTCTCTGCCATTC	-41507550	True	NA	-6	True	ATTAAA	-18	NA	41508158	41466008	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_41466154_41467733_41467887_41468395_41468539_41470647_41470744_41471805_41471982_41473324_41473497_41476576_41476621_41479171_41479283_41480475_41480603_41488393_41488514_41489506_41489594_41494355_41494579_41498118_41498190_41507949
transcript_132940.known	chr21	-	3446	14	FSM	ENSG00000184012.14	ENST00000678171.1	3446	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	22.8858758541042	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAGAAAGAAGTTTATTG	-41507550	True	NA	NA	False	AATAAA	-24	NA	41508158	41464304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_41466150_41467733_41467887_41468395_41468539_41470647_41470744_41471805_41471982_41473324_41473497_41476576_41476621_41479171_41479283_41480475_41480603_41488393_41488514_41489506_41489594_41494355_41494579_41498118_41498190_41508080
transcript_132943.known	chr21	-	3326	14	FSM	ENSG00000184012.14	ENST00000678959.1	3326	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_11	22.9648560932703	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAGAAAGAAGTTTATTG	-41507550	True	NA	NA	False	AATAAA	-24	NA	41508158	41464304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_41466154_41467733_41467887_41468395_41468539_41470647_41470744_41471805_41471982_41473324_41473497_41476576_41476621_41479171_41479283_41480475_41480603_41488393_41488514_41489506_41489594_41494479_41494579_41498118_41498190_41508080
transcript_132945.nic	chr21	-	3088	13	NIC	ENSG00000184012.14	novel	3450	14	NA	NA	-109	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_11	23.4911330789584	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACTGCATCTTTGAAGT	-41508246	False	NA	NA	False	AATAAA	-24	NA	41508267	41464552	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_41466154_41467733_41467887_41468395_41468539_41470647_41470744_41471805_41471982_41473324_41473497_41476576_41476621_41479171_41479283_41480475_41480603_41488393_41488514_41489506_41489594_41498118_41498190_41508080
transcript_132947.known	chr21	-	1427	13	FSM	ENSG00000184012.14	ENST00000424093.6	1427	13	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	21.7325920118967	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACATGGTCTTCGTCCTT	-41507484	True	NA	NA	False	AAGAAA	-45	NA	41508092	41466141	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_41466154_41467733_41467887_41468395_41468539_41470647_41470744_41471805_41471982_41473324_41473497_41476576_41476621_41479171_41479283_41480475_41480603_41489506_41489594_41494355_41494579_41498118_41498190_41508080
transcript_132949.nnic	chr21	-	3019	12	NIC	ENSG00000184012.14	novel	3240	14	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_11	20.7324554923868	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACTGCATCTTTGAAGT	-41507530	True	NA	NA	False	AATAAA	-24	NA	41508138	41464552	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_41466154_41467733_41467887_41468395_41468539_41470647_41470744_41471805_41471982_41473324_41473497_41476576_41476621_41479171_41479283_41480475_41480603_41488393_41488514_41489506_41489594_41507949
transcript_132950.known	chr21	-	3156	12	FSM	ENSG00000184012.14	ENST00000678743.1	3156	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	22.3543957257731	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAGAAAGAAGTTTATTG	-41507550	True	NA	NA	False	AATAAA	-24	NA	41508158	41464304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_41466154_41467733_41467887_41468395_41468539_41470647_41470744_41471805_41471982_41473324_41473497_41476576_41476621_41479171_41479283_41480475_41480603_41488393_41488514_41489506_41489594_41508080
transcript_132959.nnic	chr21	-	2577	8	NNC	ENSG00000184012.14	novel	3240	14	NA	NA	-9270	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_7	25.44140927941	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACTGCATCTTTGAAGT	NA	False	NA	NA	False	AATAAA	-24	NA	41478107	41464552	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr21_-_41466154_41467733_41467887_41468395_41468539_41470647_41470744_41471805_41471982_41473324_41473497_41476576_41476621_41477915
transcript_132962.known	chr21	-	3831	8	FSM	ENSG00000183421.12	ENST00000332512.8	3831	8	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_4	9.26481163833769	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTTGAGACTGCTTTTT	-41765937	True	NA	-5	True	AATAAA	-27	NA	41767052	41739372	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_41741998_41743881_41744141_41745758_41745863_41746612_41746772_41749153_41749204_41751096_41751246_41756524_41756817_41766859
transcript_132969.known	chr21	-	6473	14	FSM	ENSG00000157617.17	ENST00000380486.4	6473	14	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	6.56780744804202	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAGTTGTTTTTCCCGA	-41953419	True	NA	-5	True	AATAAA	-19	NA	41954018	41885111	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_41889345_41899052_41899363_41901621_41901750_41905723_41905838_41906991_41907167_41907659_41907785_41909458_41909524_41912331_41912441_41914597_41914722_41918104_41918228_41918855_41918961_41921971_41922086_41942146_41942246_41953369
transcript_132973.nic	chr21	-	2266	7	ISM	ENSG00000157617.17	ENST00000380486.4	6473	14	0	26277	0	771	5prime_fragment	FALSE	canonical	3	25	junction_1	3.65148371670111	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATCGAGATAGGGAAAAAT	-41953419	True	NA	NA	False	NA	NA	NA	41954018	41911388	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_-_41912441_41914597_41914722_41918104_41918228_41918855_41918961_41921971_41922086_41942146_41942246_41953369
transcript_132975.known	chr21	-	356	2	FSM	ENSG00000157617.17	ENST00000478372.1	356	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATTTATCTCCAAAGAC	-41953503	False	NA	NA	False	NA	NA	NA	41953519	41952945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_41953152_41953369
transcript_132976.known	chr21	-	6846	4	FSM	ENSG00000173276.14	ENST00000398505.7	6846	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	4.54606056566195	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTCTCAATGGTATGCC	-42008627	True	NA	0	True	AATAAA	-23	NA	42010357	41986830	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_41991890_41992492_41994109_42002896_42002962_42010251
transcript_132977.known	chr21	-	5608	2	FSM	ENSG00000173276.14	ENST00000398511.3	5608	2	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATAATGCCGTTCTGGTT	NA	False	NA	-7	True	AATAAA	-18	NA	42010387	41988636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_41994109_42010251
transcript_13298.known	chr1	-	2840	17	FSM	ENSG00000014914.21	ENST00000439741.4	2840	17	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_16	7.20649663498152	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGCATTGTTTCTTGT	-149936622	True	NA	-2	True	ATTAAA	-19	NA	149936879	149928650	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_149929318_149929622_149929917_149930364_149930548_149930791_149930966_149931259_149931427_149931943_149932015_149932263_149932331_149933405_149933531_149933609_149933699_149933854_149933943_149934190_149934327_149934447_149934527_149934985_149935129_149935298_149935360_149935583_149935706_149936153_149936230_149936581
transcript_132983.known	chr21	+	2976	15	FSM	ENSG00000160179.19	ENST00000398449.8	2976	15	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_9	4.36591622569604	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGACTACCTTTAATT	42218968	True	NA	19	True	AATATA	-19	NA	42219139	42297244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_42219305_42225670_42225915_42271069_42271188_42273302_42273436_42276894_42276946_42282273_42282420_42284559_42284684_42285879_42285995_42287888_42288038_42288210_42288313_42290049_42290219_42291091_42291193_42291497_42291657_42294541_42294661_42296163
transcript_132985.known	chr21	+	3034	15	FSM	ENSG00000160179.19	ENST00000361802.6	3034	15	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_9	3.77424137532083	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGACTACCTTTAATT	42218946	True	NA	19	True	AATATA	-19	NA	42219117	42297244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_42219305_42225670_42225915_42271069_42271188_42273302_42273436_42276894_42276946_42282273_42282420_42284559_42284684_42285879_42285995_42287888_42288074_42288210_42288313_42290049_42290219_42291091_42291193_42291497_42291657_42294541_42294661_42296163
transcript_132991.known	chr21	-	867	3	FSM	ENSG00000160180.17	ENST00000518498.3	867	3	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_2	21.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTGTATTTGTTTGCT	-42315380	True	NA	NA	False	AGTAAA	-20	NA	42315409	42311666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_42312270_42313484_42313632_42315292
transcript_132992.known	chr21	-	419	2	FSM	ENSG00000160180.17	ENST00000489676.1	419	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTCTGAGGTTGTGCTT	-42313373	True	NA	-1	True	AATAAA	-40	NA	42313686	42312052	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_42312270_42313484
transcript_132993.known	chr21	-	2105	10	FSM	ENSG00000160183.17	ENST00000474596.5	2105	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.831479419283098	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTCTGGCGTGTCTGCGTG	NA	False	NA	NA	False	NA	NA	NA	42389118	42371889	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_42372780_42375715_42375869_42376540_42376687_42380116_42380213_42382064_42382235_42383032_42383199_42383969_42384014_42385408_42385535_42388402_42388527_42388928
transcript_132994.nic	chr21	+	3161	22	NIC	ENSG00000160190.14	novel	3712	20	NA	NA	-89	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	52.5859624492318	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCAGAACACTCAGAGAAT	42513730	False	NA	6	True	AATAAA	-19	NA	42513762	42581426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_+_42513925_42514630_42514718_42514869_42514936_42518276_42518511_42525775_42525858_42534697_42534831_42535471_42535551_42539511_42539648_42542403_42542481_42543435_42543603_42547102_42547141_42554061_42554143_42558957_42559090_42562077_42562169_42563814_42563878_42564707_42564794_42565826_42565876_42566984_42567059_42568359_42568439_42574817_42574916_42579735_42579801_42580344
transcript_132999.nic	chr21	+	3164	21	NIC	ENSG00000160190.14	novel	3712	20	NA	NA	-158	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	46.4013739020732	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCAGAACACTCAGAGAAT	42513661	True	NA	6	True	AATAAA	-19	NA	42513693	42581426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_+_42513925_42514630_42514718_42518276_42518511_42525775_42525858_42534697_42534831_42535471_42535551_42539511_42539648_42542403_42542481_42543435_42543603_42547102_42547141_42554061_42554143_42558957_42559090_42562077_42562169_42563814_42563878_42564707_42564794_42565826_42565876_42566984_42567059_42568359_42568439_42574817_42574916_42579735_42579801_42580344
transcript_133.known	SIRV4	-	626	2	FSM	SIRV4A	SIRV405	626	2	0	0	0	0	multi-exon	FALSE	canonical	3	8720	junction_1	0	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTCTCTTTTCAGCAAG	NA	False	NA	NA	False	NA	NA	NA	13937	8629	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV4_-_8991_13672
transcript_13300.known	chr1	+	2350	16	FSM	ENSG00000136631.15	ENST00000644526.1	2350	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	61.8145613913097	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGATTTAGTTTTATTT	150066089	True	NA	20	True	AATAAA	-22	NA	150067847	150145329	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150067951_150068629_150068765_150072165_150072227_150076232_150076313_150076915_150076985_150077093_150077232_150077668_150077780_150081341_150081477_150081883_150081998_150082715_150082884_150091936_150092096_150092301_150092410_150093526_150093649_150110495_150110628_150142837_150142932_150144708
transcript_133002.nnic	chr21	+	3223	20	NIC	ENSG00000160190.14	novel	3712	20	NA	NA	-304	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_5	42.307736861453	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCAGAACACTCAGAGAAT	42513533	True	NA	6	True	AATAAA	-19	NA	42513547	42581426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_+_42513925_42518276_42518511_42525775_42525858_42534697_42534831_42535471_42535551_42539511_42539648_42542403_42542481_42543435_42543603_42547102_42547141_42554061_42554143_42558957_42559090_42562077_42562169_42563814_42563878_42564707_42564794_42565826_42565876_42566984_42567059_42568359_42568439_42574817_42574916_42579735_42579801_42580344
transcript_133009.known	chr21	+	3712	20	FSM	ENSG00000160190.14	ENST00000352133.3	3712	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	41.347523850067	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCAGAACACTCAGAGAAT	42513311	True	NA	6	True	AATAAA	-19	NA	42513851	42581426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_42514718_42518276_42518511_42525775_42525858_42534697_42534831_42535471_42535551_42539511_42539648_42542403_42542481_42543435_42543603_42547102_42547141_42554061_42554143_42558957_42559090_42562077_42562169_42563814_42563878_42564707_42564794_42565826_42565876_42566984_42567059_42568359_42568439_42574817_42574916_42579735_42579801_42580344
transcript_13301.known	chr1	+	2328	15	FSM	ENSG00000136631.15	ENST00000644510.2	2328	15	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_4	16.2839911369092	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGATTTAGTTTTATTT	150066017	True	NA	20	True	AATAAA	-22	NA	150067775	150145329	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150067951_150068629_150068765_150072165_150072227_150076232_150076313_150076915_150076985_150077093_150077232_150077668_150077780_150081341_150081477_150081883_150081998_150082715_150082884_150091936_150092096_150092301_150092410_150093526_150093649_150110495_150110628_150144708
transcript_133011.nic	chr21	+	2965	20	NIC	ENSG00000160190.14	novel	481	5	NA	NA	293	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	42.8726129577876	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCAGAACACTCAGAGAAT	42514796	False	NA	6	True	AATAAA	-19	NA	42514816	42581426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_+_42514936_42518276_42518511_42525775_42525858_42534697_42534831_42535471_42535551_42539511_42539648_42542403_42542481_42543435_42543603_42547102_42547141_42554061_42554143_42558957_42559090_42562077_42562169_42563814_42563878_42564707_42564794_42565826_42565876_42566984_42567059_42568359_42568439_42574817_42574916_42579735_42579801_42580344
transcript_13304.known	chr1	+	2315	15	FSM	ENSG00000136631.15	ENST00000643970.1	2315	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	45.8376126635526	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTTTCTGCTTTTCATTA	150067129	True	NA	NA	False	NA	NA	NA	150067278	150145163	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150067607_150068629_150068765_150072165_150072227_150076232_150076313_150076915_150076985_150077093_150077232_150077668_150077780_150081341_150081477_150081883_150081998_150082715_150082884_150091936_150092096_150092301_150092410_150093526_150093649_150110495_150110628_150144708
transcript_133040.known	chr21	+	617	4	FSM	ENSG00000160190.14	ENST00000471277.5	617	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	66.5482281256734	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGATTTATACTTTCAG	42513351	True	NA	NA	False	ATTAAA	-15	NA	42513891	42526038	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_42513925_42514630_42514718_42518276_42518511_42525775
transcript_133048.known	chr21	+	2192	20	FSM	ENSG00000160191.18	ENST00000291539.11	2192	20	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_4	35.2823985214917	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	42652377	True	NA	18	True	AATATA	-15	NA	42653620	42775509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_42653884_42686191_42686263_42687916_42687995_42698967_42699012_42731769_42731950_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_133057.known	chr21	+	1883	19	FSM	ENSG00000160191.18	ENST00000335512.8	1883	19	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_4	37.2379734500505	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	42652766	True	NA	18	True	AATATA	-15	NA	42653749	42775509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_42653884_42686191_42686263_42687916_42687995_42698967_42699012_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_133059.known	chr21	+	1956	19	FSM	ENSG00000160191.18	ENST00000328862.10	1956	19	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	53.7109605569535	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	42652795	True	NA	18	True	AATATA	-15	NA	42653778	42775509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_42653884_42686191_42686263_42698967_42699012_42731769_42731950_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_133061.known	chr21	+	1963	19	FSM	ENSG00000160191.18	ENST00000398225.7	1963	19	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	53.663014598534	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	42652795	True	NA	18	True	AATATA	-15	NA	42653778	42775509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_42653884_42687916_42687995_42698967_42699012_42731769_42731950_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_133068.known	chr21	+	1885	18	FSM	ENSG00000160191.18	ENST00000398232.7	1885	18	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	50.6221500543445	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	42652795	True	NA	18	True	AATATA	-15	NA	42653778	42775509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_42653884_42698967_42699012_42731769_42731950_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_133072.known	chr21	+	1776	18	FSM	ENSG00000160191.18	ENST00000398236.7	1776	18	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	56.1742223141109	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	42652795	True	NA	18	True	AATATA	-15	NA	42653778	42775509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_42653884_42686191_42686263_42698967_42699012_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_133074.known	chr21	+	1783	18	FSM	ENSG00000160191.18	ENST00000398234.7	1783	18	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	56.147420884421	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	42652795	True	NA	18	True	AATATA	-15	NA	42653778	42775509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_42653884_42687916_42687995_42698967_42699012_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_133076.known	chr21	+	1671	17	FSM	ENSG00000160191.18	ENST00000398224.3	1671	17	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	53.0871556381579	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	42652829	False	NA	18	True	AATATA	-15	NA	42653812	42775509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_42653884_42698967_42699012_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_133078.known	chr21	+	1865	17	FSM	ENSG00000160191.18	ENST00000490803.5	1865	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	53.8166737638067	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	42652771	True	NA	18	True	AATATA	-15	NA	42653754	42775509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_42653884_42731769_42731950_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_133080.known	chr21	+	1616	16	FSM	ENSG00000160191.18	ENST00000349112.7	1616	16	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	64.8847182830184	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	42652829	False	NA	18	True	AATATA	-15	NA	42653812	42775509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_42653884_42698967_42699012_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_133082.known	chr21	+	1606	15	FSM	ENSG00000160191.18	ENST00000398227.7	1606	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	54.8692322988141	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	42652795	True	NA	18	True	AATATA	-15	NA	42653778	42775509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_42653884_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_133089.known	chr21	+	794	5	FSM	ENSG00000160191.18	ENST00000486902.5	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	57.7380940108002	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATCACTATTTCATGTAT	42652795	True	NA	0	True	AATAAA	-11	NA	42653778	42701189	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_42653884_42686191_42686263_42687916_42687995_42698967_42699012_42700693
transcript_13309.nic	chr1	+	1625	6	NIC	ENSG00000023902.14	novel	1809	5	NA	NA	284	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	90.4897784282844	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCATTGCTCTTGCTGAT	NA	False	NA	7	True	GATAAA	-42	NA	150149466	150159628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_150149787_150150911_150151059_150156065_150156207_150156910_150157016_150157384_150157487_150158818
transcript_133094.known	chr21	-	1471	12	FSM	ENSG00000160193.12	ENST00000330317.6	1471	12	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_1	60.2767721116381	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGTGAGATTTACATTAT	-42874548	True	NA	-28	True	AGTAAA	-15	NA	42879531	42843093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_42843282_42850040_42850243_42852254_42852325_42853568_42853753_42854561_42854627_42855681_42855781_42859661_42859723_42862281_42862395_42863439_42863597_42873550_42873692_42876701_42876768_42879406
transcript_133097.known	chr21	-	2106	11	FSM	ENSG00000160193.12	ENST00000398208.3	2106	11	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_8	50.2335545228486	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGCCTGCGCTGTGTG	-42874556	True	NA	-1	True	AATATA	-14	NA	42879539	42849225	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_42850243_42852254_42852325_42853568_42853753_42854561_42854627_42855681_42855781_42859661_42859723_42862281_42862395_42863439_42863597_42873550_42873692_42876701_42876768_42879406
transcript_133101.nnic	chr21	-	1249	10	NIC	ENSG00000160193.12	novel	1471	12	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	3	59	junction_7	115.615689481666	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGTGAGATTTACATTAT	-42874596	True	NA	-28	True	AGTAAA	-15	NA	42879579	42843093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_42843282_42850040_42850243_42852254_42852325_42853568_42853753_42854561_42854627_42855681_42855781_42859661_42859723_42873550_42873692_42876701_42876768_42879406
transcript_133104.known	chr21	-	1977	11	FSM	ENSG00000160193.12	ENST00000476326.5	1977	11	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_10	151.683881806868	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGCCTGCGCTGTGTG	-42874585	True	NA	-1	True	AATATA	-14	NA	42879568	42849225	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_42850243_42852254_42852325_42853568_42853753_42854561_42854627_42855681_42855781_42859661_42859723_42862281_42862395_42863439_42863597_42873602_42873692_42876701_42876768_42879512
transcript_133107.nnic	chr21	+	1634	5	NNC	ENSG00000160194.18	novel	5725	4	NA	NA	-4	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	211.924957237226	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGCCCGCTGTGCATAAT	42884971	True	NA	11	True	AATAAA	-17	NA	42893263	42909100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr21_+_42893382_42896926_42897048_42903181_42904277_42906839_42906903_42908863
transcript_133110.known	chr21	+	5725	4	FSM	ENSG00000160194.18	ENST00000354250.7	5725	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	239.338440056939	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTATATGCTAGGCACTAT	42885016	True	NA	77	True	AATAAA	-17	NA	42893308	42913299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_42893382_42896926_42897048_42903181_42904277_42908863
transcript_133111.nnic	chr21	+	599	4	NNC	ENSG00000160194.18	novel	5725	4	NA	NA	-64	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	230.236110692191	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGCCCGCTGTGCATAAT	NA	False	NA	11	True	AATAAA	-17	NA	42893203	42909100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr21_+_42893382_42896926_42897048_42906839_42906903_42908863
transcript_133114.nic	chr21	+	928	3	ISM	ENSG00000160194.18	ENST00000354250.7	5725	4	-105	9489	-64	-121	5prime_fragment	FALSE	canonical	3	118	junction_2	219.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATTGCAGAAAACATTTAG	NA	False	NA	NA	False	TTTAAA	-8	NA	42893203	42903810	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_42893382_42896926_42897048_42903181
transcript_133115.known	chr21	+	4676	3	FSM	ENSG00000160194.18	ENST00000340344.4	4676	3	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_2	148	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTAGGCACTATGCCTC	42884975	True	NA	82	True	AATAAA	-22	NA	42893267	42913304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_42893382_42896926_42897048_42908863
transcript_133118.known	chr21	-	2790	2	FSM	ENSG00000233056.4	ENST00000447535.2	2774	2	-16	0	-16	0	multi-exon	FALSE	canonical	3	133	junction_1	0	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGCCTCATGTTGTCTGT	-42925633	False	NA	-7	True	ATTAAA	-17	NA	42925646	42916802	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_42919292_42925345
transcript_133119.known	chr21	+	5300	11	FSM	ENSG00000160199.15	ENST00000291547.10	5300	11	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_5	34.0992668542888	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATTTTCATGACAAGAA	42971915	True	NA	NA	False	NA	NA	NA	42974561	43033931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_42974665_43004325_43004433_43007490_43007619_43010052_43010225_43013067_43013239_43016907_43017008_43018132_43018231_43021302_43021432_43024870_43024948_43028701_43028875_43029889
transcript_13312.known	chr1	+	2114	6	FSM	ENSG00000023902.14	ENST00000369124.5	2114	6	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	28.7791591260064	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGCTTCTCATTCCTAG	150149768	True	NA	4	True	ATTAAA	-16	NA	150149915	150160065	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150150288_150150911_150151059_150156065_150156207_150156910_150157016_150157384_150157487_150158818
transcript_133127.nic	chr21	+	1428	10	ISM	ENSG00000160199.15	ENST00000291547.10	5300	11	-263	5150	-211	0	5prime_fragment	FALSE	canonical	3	152	junction_5	35.6432945228755	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTCAGAACCGGCCAGTT	NA	False	NA	NA	False	AAGAAA	-5	NA	42974298	43028781	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_42974665_43004325_43004433_43007490_43007619_43010052_43010225_43013067_43013239_43016907_43017008_43018132_43018231_43021302_43021432_43024870_43024948_43028701
transcript_133129.known	chr21	+	5180	10	FSM	ENSG00000160199.15	ENST00000432907.6	5180	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	71.5502068394315	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATTTTCATGACAAGAA	42974409	False	NA	NA	False	NA	NA	NA	42974509	43033931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_42974665_43004325_43004433_43007490_43007619_43013067_43013239_43016907_43017008_43018132_43018231_43021302_43021432_43024870_43024948_43028701_43028875_43029889
transcript_13317.known	chr1	-	3407	7	FSM	ENSG00000143401.15	ENST00000583931.6	3407	7	0	0	0	0	multi-exon	TRUE	canonical	3	1080	junction_5	36.8947451844056	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCAGTGTATAGCATTCA	-150190470	True	NA	-2	True	AATAAA	-24	NA	150236112	150218416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_150220762_150223185_150223241_150226607_150226796_150229071_150229238_150230570_150230694_150231776_150231927_150235732
transcript_13320.known	chr1	-	1339	6	FSM	ENSG00000143401.15	ENST00000436748.6	1339	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	457.956941207359	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAGTAGGTGATCCAG	-150190380	True	NA	97	True	TATAAA	-35	NA	150236022	150220271	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_150220762_150223185_150223241_150226607_150226796_150229071_150229238_150231776_150231927_150235732
transcript_13321.nic	chr1	-	1088	6	ISM	ENSG00000143401.15	ENST00000583931.6	3407	7	-51	4794	-7	-2673	5prime_fragment	FALSE	canonical	3	1080	junction_4	39.2907113705008	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGGGAAGAAGAGGAAGA	NA	False	NA	-16	True	NA	NA	NA	150236163	150223210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_150223241_150226607_150226796_150229071_150229238_150230570_150230694_150231776_150231927_150235732
transcript_13322.nic	chr1	-	890	5	ISM	ENSG00000143401.15	ENST00000583931.6	3407	7	-51	8359	-7	-168	5prime_fragment	FALSE	canonical	3	1080	junction_3	43.0987238790199	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAGAGGAAAATGAAGC	NA	False	NA	-40	True	TTTAAA	-34	NA	150236163	150226775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_150226796_150229071_150229238_150230570_150230694_150231776_150231927_150235732
transcript_13323.nic	chr1	-	870	4	ISM	ENSG00000143401.15	ENST00000583931.6	3407	7	-51	10655	-7	0	5prime_fragment	FALSE	canonical	3	1080	junction_2	48.6095555306659	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATCGTTCTTAATACTCA	NA	False	NA	NA	False	AATGAA	-32	NA	150236163	150229071	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_150229238_150230570_150230694_150231776_150231927_150235732
transcript_133249.nic	chr21	-	2401	18	NIC	ENSG00000160200.18	novel	2353	18	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	860	junction_1	371.543437503015	1060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	-43075863	False	NA	NA	False	TATAAA	-14	NA	43075955	43053190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_43053648_43053861_43053984_43056802_43056888_43058144_43058254_43058833_43058969_43059225_43059304_43060440_43060547_43062310_43062396_43062952_43063079_43063899_43063992_43065202_43065273_43065386_43065522_43065615_43065696_43066242_43066378_43068508_43068616_43071984_43072202_43073265_43073342_43075769
transcript_13325.nic	chr1	-	680	3	ISM	ENSG00000143401.15	ENST00000533654.5	908	5	-208	10057	-7	-1523	5prime_fragment	FALSE	canonical	3	1080	junction_1	45.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCTCAGTACAGTAGAAGC	NA	False	NA	NA	False	AATAAA	-2	NA	150236163	150230594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_150230694_150231776_150231927_150235732
transcript_133250.known	chr21	-	2353	18	FSM	ENSG00000160200.18	ENST00000359624.7	2353	18	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_17	595.333345603573	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	-43076270	False	NA	NA	False	TATAAA	-14	NA	43076362	43053190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_43053648_43053861_43053984_43056802_43056888_43058144_43058254_43058833_43058969_43059225_43059304_43060440_43060547_43062310_43062396_43062952_43063079_43063899_43063992_43065202_43065273_43065386_43065522_43065615_43065696_43066242_43066378_43068508_43068616_43071984_43072202_43073265_43073342_43076224
transcript_13326.known	chr1	-	2989	7	FSM	ENSG00000143401.15	ENST00000616917.4	2989	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	424.886030470394	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAAAAAATTTGCAGTA	-150189036	False	136	-58	True	AATAAA	-21	NA	150234678	150218554	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_150220762_150223185_150223241_150226607_150226796_150229071_150229238_150230570_150230694_150231776_150231927_150234578
transcript_13327.known	chr1	+	1531	12	FSM	ENSG00000118298.12	ENST00000647854.1	1531	12	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_1	114.011381192065	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGGAAATTAAAGTTTC	150257228	True	NA	-14	True	GATAAA	-36	NA	150257250	150265049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150257329_150258079_150258184_150260150_150260172_150261458_150261639_150262157_150262301_150262524_150262621_150262803_150262871_150263041_150263200_150263298_150263420_150263658_150263680_150263793_150263879_150264592
transcript_13329.known	chr1	+	1788	11	FSM	ENSG00000118298.12	ENST00000369111.9	1788	11	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_8	55.9486371594519	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCCTATCCTTTGAGG	150255337	True	NA	15	True	ATTAAA	-15	NA	150257773	150265078	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150258184_150260150_150260172_150261458_150261639_150262157_150262301_150262524_150262621_150262803_150262871_150263041_150263200_150263298_150263420_150263658_150263680_150263793_150263879_150264592
transcript_13333.nic	chr1	+	1706	10	NIC	ENSG00000118298.12	novel	1788	11	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	108	junction_9	96.0971730420134	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCCTATCCTTTGAGG	150255334	True	NA	15	True	ATTAAA	-15	NA	150257770	150265078	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_150258184_150260150_150260172_150261458_150261639_150262157_150262301_150262524_150262621_150262803_150262871_150263041_150263200_150263298_150263420_150263658_150263680_150264592
transcript_133365.known	chr21	-	2453	17	FSM	ENSG00000160200.18	ENST00000398158.5	2453	17	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_16	525.313950027743	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	-43075739	False	NA	NA	False	TATAAA	-14	NA	43075831	43053190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_43053984_43056802_43056888_43058144_43058254_43058833_43058969_43059225_43059304_43060440_43060547_43062310_43062396_43062952_43063079_43063899_43063992_43065202_43065273_43065386_43065522_43065615_43065696_43066242_43066378_43068508_43068616_43071984_43072202_43073265_43073304_43075769
transcript_133372.known	chr21	-	2495	17	FSM	ENSG00000160200.18	ENST00000398165.8	2495	17	0	0	0	0	multi-exon	FALSE	canonical	3	1625	junction_13	236.173524328511	2167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	-43075743	False	NA	NA	False	TATAAA	-14	NA	43075835	43053190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_43053984_43056802_43056888_43058144_43058254_43058833_43058969_43059225_43059304_43060440_43060547_43062310_43062396_43062952_43063079_43063899_43063992_43065202_43065273_43065386_43065522_43065615_43065696_43066242_43066378_43068508_43068616_43071984_43072202_43073265_43073342_43075769
transcript_133373.known	chr21	-	2583	17	FSM	ENSG00000160200.18	ENST00000352178.9	2583	17	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_16	547.807048603794	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	-43076286	False	NA	NA	False	TATAAA	-14	NA	43076378	43053190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_43053984_43056802_43056888_43058144_43058254_43058833_43058969_43059225_43059304_43060440_43060547_43062310_43062396_43062952_43063079_43063899_43063992_43065202_43065273_43065386_43065522_43065615_43065696_43066242_43066378_43068508_43068616_43071984_43072202_43073265_43073342_43076224
transcript_13346.nic	chr1	-	1645	7	NIC	ENSG00000117362.13	novel	1730	7	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_6	158.347367799054	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGGGGAACTTGGCTTT	-150269046	False	NA	-21	True	AATAAA	-14	NA	150269067	150265403	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_150266195_150266532_150266657_150267074_150267203_150267355_150267479_150267715_150267790_150267956_150267992_150268697
transcript_13348.known	chr1	+	509	6	FSM	ENSG00000118292.9	ENST00000369099.8	509	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	103.150375665821	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTTACCATCTACTCCT	150271186	True	NA	10	True	AATAAA	-16	NA	150272789	150280916	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150272864_150274086_150274171_150275740_150275800_150276521_150276633_150279642_150279742_150280834
transcript_13351.known	chr1	-	1038	6	FSM	ENSG00000117362.13	ENST00000461320.5	1038	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	213.215384060344	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGCAGCCTGGGTTCAGC	-150265676	True	NA	NA	False	NA	NA	NA	150269015	150266348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_150266657_150267074_150267255_150267355_150267479_150267715_150267790_150267956_150267992_150268697
transcript_133528.known	chr21	-	966	9	FSM	ENSG00000160201.12	ENST00000464750.5	966	9	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_6	1982.79931142186	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGGTGTAACTTATTTC	-43101200	False	NA	NA	False	AATAAA	-20	NA	43107524	43092955	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_43093250_43094470_43094564_43094654_43094789_43095437_43095537_43095693_43095744_43100452_43100520_43101365_43101433_43104314_43104403_43107450
transcript_13353.known	chr1	+	418	5	FSM	ENSG00000118292.9	ENST00000369098.3	418	5	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_4	62.7176211283559	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGTTACCATCTACTC	150271176	True	NA	8	True	AATAAA	-14	NA	150272779	150280914	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150272864_150274086_150274171_150275740_150275800_150276521_150276633_150280834
transcript_133535.known	chr21	-	945	8	FSM	ENSG00000160201.12	ENST00000291552.9	945	8	0	0	0	0	multi-exon	FALSE	canonical	3	3780	junction_6	906.719473752292	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGGTGTAACTTATTTC	-43101246	True	NA	NA	False	AATAAA	-20	NA	43107570	43092955	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_43093250_43094470_43094564_43094654_43094789_43095437_43095537_43095693_43095744_43100452_43100520_43104314_43104403_43107450
transcript_133536.known	chr21	-	940	8	FSM	ENSG00000160201.12	ENST00000380276.6	940	8	0	0	0	0	multi-exon	FALSE	canonical	3	2363	junction_5	1553.2902799791	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGGTGTAACTTATTTC	-43101241	True	NA	NA	False	AATAAA	-20	NA	43107565	43092955	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_43093250_43094470_43094564_43094654_43094789_43095437_43095537_43095693_43095744_43101365_43101433_43104314_43104403_43107450
transcript_133538.known	chr21	-	4694	7	FSM	ENSG00000160201.12	ENST00000475639.5	4694	7	0	0	0	0	multi-exon	FALSE	canonical	3	4218	junction_5	691.723130225446	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGGTGTAACTTATTTC	-43101200	False	NA	NA	False	AATAAA	-20	NA	43107524	43092955	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_43093250_43094470_43094564_43094654_43094789_43095437_43095537_43095693_43095744_43100452_43104403_43107450
transcript_133545.known	chr21	-	1900	9	FSM	ENSG00000160207.9	ENST00000291560.7	1900	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	2.75850956133924	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTGCTGTCTAAAATCTA	-43659226	True	NA	NA	False	AATAAA	-26	NA	43659488	43529185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_43529963_43592224_43592329_43613829_43613948_43630321_43630455_43633271_43633422_43644288_43644393_43656586_43656738_43658060_43658321_43659385
transcript_133549.known	chr21	+	5078	16	FSM	ENSG00000160208.13	ENST00000340648.6	5078	16	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_9	35.4484915836423	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTGATGTTGACTT	43645457	True	NA	18	True	ATTAAA	-23	NA	43659559	43696079	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_43659795_43669883_43669967_43672307_43672366_43673869_43673956_43674635_43674698_43675033_43675164_43676271_43676337_43676732_43676915_43683278_43683374_43684552_43684651_43685769_43685790_43686803_43686936_43687515_43688241_43690287_43690441_43691438_43691503_43693189
transcript_133551.nic	chr21	+	1341	13	ISM	ENSG00000160208.13	ENST00000340648.6	5078	16	-43	8512	-43	-8510	5prime_fragment	FALSE	canonical	3	342	junction_9	36.3363913086225	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAGAAGGAAGAAGAAGA	43645414	True	NA	34	True	NA	NA	NA	43659516	43687567	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_43659795_43669883_43669967_43672307_43672366_43673869_43673956_43674635_43674698_43675033_43675164_43676271_43676337_43676732_43676915_43683278_43683374_43684552_43684651_43685769_43685790_43686803_43686936_43687515
transcript_133552.nic	chr21	+	1922	13	ISM	ENSG00000160208.13	ENST00000340648.6	5078	16	-43	7931	-43	-7929	5prime_fragment	FALSE	canonical	3	342	junction_9	36.3363913086225	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTTTGAAAAAGAGGAAGAAA	43645414	True	NA	13	True	AAAACA	-5	NA	43659516	43688148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_43659795_43669883_43669967_43672307_43672366_43673869_43673956_43674635_43674698_43675033_43675164_43676271_43676337_43676732_43676915_43683278_43683374_43684552_43684651_43685769_43685790_43686803_43686936_43687515
transcript_133555.nic	chr21	+	1281	12	ISM	ENSG00000160208.13	ENST00000340648.6	5078	16	-43	9152	-43	-9150	5prime_fragment	TRUE	canonical	3	342	junction_9	36.6750303509032	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGAAAGGTAAGCTGTAAA	43645414	True	NA	18	True	AATAAA	-27	NA	43659516	43686927	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_43659795_43669883_43669967_43672307_43672366_43673869_43673956_43674635_43674698_43675033_43675164_43676271_43676337_43676732_43676915_43683278_43683374_43684552_43684651_43685769_43685790_43686803
transcript_13356.known	chr1	-	1730	7	FSM	ENSG00000117362.13	ENST00000369109.8	1730	7	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_1	77.0528318031783	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGGGGAACTTGGCTTT	-150265677	True	NA	-21	True	AATAAA	-14	NA	150269016	150265403	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_150266195_150266532_150266657_150267074_150267203_150267355_150267479_150267715_150267790_150267956_150268128_150268697
transcript_133566.known	chr21	+	7341	11	FSM	ENSG00000160209.19	ENST00000291565.9	7341	11	0	0	0	0	multi-exon	FALSE	canonical	3	553	junction_5	42.7546488700352	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTTGAGGCATGATGGTT	43709674	True	NA	10	True	AATAAA	-16	NA	43719128	43762299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_43719382_43734068_43734124_43741666_43741772_43743723_43743808_43746078_43746126_43748994_43749081_43750499_43750546_43752517_43752630_43753582_43753720_43755697_43755765_43755950
transcript_133575.known	chr21	+	7297	10	FSM	ENSG00000160209.19	ENST00000468090.5	7297	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	191.294292055041	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGATGGTTCCTTCCCA	43709642	True	NA	18	True	AATAAA	-24	NA	43719096	43762307	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_43719382_43734068_43734124_43741666_43741772_43746078_43746126_43748994_43749081_43750499_43750546_43752517_43752630_43753582_43753720_43755697_43755765_43755950
transcript_133584.known	chr21	+	2251	3	FSM	ENSG00000160209.19	ENST00000398081.5	2251	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	297.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGTGCCTTTTGCAGCC	43709639	True	NA	NA	False	AATAAA	-17	NA	43719093	43738861	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_43719382_43734068_43734124_43736953
transcript_133588.known	chr21	-	588	3	FSM	ENSG00000160213.9	ENST00000291568.7	588	3	0	0	0	0	multi-exon	FALSE	canonical	3	1297	junction_1	5	609	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGATTGCCTCCTTTGTTTT	-43748016	True	NA	-9	True	AATAGA	-20	NA	43776308	43773949	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_43774331_43774657_43774760_43776203
transcript_13360.known	chr1	+	1179	6	FSM	ENSG00000159208.16	ENST00000369094.5	1179	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	16.0174904401407	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGCTGATTGGGGGAA	150281916	True	NA	24	True	ATTAAA	-21	NA	150282542	150287093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150282619_150283461_150283634_150283804_150283881_150284425_150284505_150284596_150284709_150286429
transcript_133608.known	chr21	+	2958	13	FSM	ENSG00000160214.13	ENST00000497547.2	2958	13	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_7	48.9701581464558	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAGCGTGTCTAACGTAA	43785040	True	NA	NA	False	NA	NA	NA	43789576	43805293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_43789763_43791349_43791433_43792671_43792730_43793318_43793405_43795188_43795251_43797421_43797552_43797630_43797696_43797906_43798101_43799569_43799650_43800516_43800615_43800861_43800882_43802273_43802388_43803511
transcript_13361.known	chr1	+	771	6	FSM	ENSG00000159208.16	ENST00000447007.5	771	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	20.370567002418	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTACAGCATCTCCTGTCA	150281916	True	NA	NA	False	NA	NA	NA	150282542	150286737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150282619_150283513_150283634_150283804_150283881_150284425_150284505_150284596_150284709_150286429
transcript_13362.known	chr1	+	1433	6	FSM	ENSG00000159208.16	ENST00000369095.5	1433	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	26.0338241524368	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGCTGATTGGGGGAA	150281916	True	NA	24	True	ATTAAA	-21	NA	150282542	150287093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150282619_150283207_150283634_150283804_150283881_150284425_150284505_150284596_150284709_150286429
transcript_133620.nic	chr21	+	2963	12	ISM	ENSG00000160214.13	ENST00000497547.2	2958	13	-75	1194	-11	-1194	intron_retention	FALSE	canonical	3	403	junction_7	46.314769256034	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGAAGTGTCGCTTCAGGT	NA	False	NA	20	True	AATAAA	-21	NA	43789501	43804099	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_43789763_43791349_43791433_43792671_43792730_43793318_43793405_43795188_43795251_43797421_43797552_43797630_43797696_43797906_43798101_43799569_43799650_43800516_43800615_43800861_43800882_43802273
transcript_133628.nic	chr21	+	2402	12	NIC	ENSG00000160214.13	novel	2958	13	NA	NA	15	-1194	intron_retention	FALSE	canonical	3	403	junction_6	49.8694162557168	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGAAGTGTCGCTTCAGGT	43784991	True	NA	20	True	AATAAA	-21	NA	43789527	43804099	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_+_43789763_43791349_43791433_43792671_43793405_43795188_43795251_43797421_43797552_43797630_43797696_43797906_43798101_43799569_43799650_43800516_43800615_43800861_43800882_43802273_43802388_43803511
transcript_133644.known	chr21	+	6565	10	FSM	ENSG00000160216.21	ENST00000291572.13	6565	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	6.83310749400969	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTCCGAGTTCTCGTTT	43864942	True	NA	NA	False	ATTAAA	-33	NA	43865222	43987592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_43865346_43903956_43904020_43959633_43959860_43967945_43968116_43969117_43969280_43970652_43970807_43971387_43971491_43978045_43978122_43980988_43981188_43982303
transcript_133649.known	chr21	+	6986	23	FSM	ENSG00000160218.13	ENST00000291574.9	6986	23	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_22	20.7723294173159	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTTGCACTGGATCTTT	44008978	True	NA	NA	False	AATACA	-16	NA	44012308	44106552	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_44012561_44032090_44032173_44037791_44037928_44052279_44052477_44055697_44055894_44059102_44059215_44063537_44063786_44074323_44074471_44075038_44075154_44076551_44076629_44077692_44077785_44079563_44079705_44080014_44080128_44082787_44083303_44084121_44084264_44086801_44086961_44087698_44087929_44089832_44089934_44091922_44092050_44094062_44094234_44098356_44098535_44102777_44102973_44103292
transcript_133657.known	chr21	+	1763	7	FSM	ENSG00000160218.13	ENST00000380221.7	1763	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_6	34.5756015453415	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTATGTGTCTTTTTTT	44008988	True	NA	16	True	AATAAA	-25	NA	44012318	44060262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_44012561_44032090_44032173_44037791_44037928_44052279_44052477_44055697_44055894_44059102_44059215_44059464
transcript_133658.known	chr21	+	3188	21	FSM	ENSG00000241945.8	ENST00000291576.12	3188	21	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_15	98.1088171368914	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGTCTTGTGGGGGC	44102907	True	NA	89	True	ATTAAA	-16	NA	44107398	44131181	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_44107435_44108983_44109097_44113752_44113848_44114178_44114279_44114624_44114769_44115263_44115400_44115690_44115921_44117819_44117964_44118762_44118834_44119386_44119524_44120347_44120497_44120630_44120779_44120951_44121103_44122176_44122358_44124579_44124728_44126010_44126120_44126899_44126966_44127931_44128151_44128246_44128398_44128551_44128627_44130596
transcript_13366.known	chr1	+	2011	5	FSM	ENSG00000159208.16	ENST00000290363.6	2011	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_3	8.49632273398321	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGCTGATTGGGGGAA	150281927	True	NA	24	True	ATTAAA	-21	NA	150282553	150287093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150283634_150283804_150283881_150284425_150284505_150284596_150284709_150286429
transcript_133661.nic	chr21	+	2086	16	ISM	ENSG00000241945.8	ENST00000291576.12	3188	21	-81	5149	-55	-1823	5prime_fragment	FALSE	canonical	3	33	junction_15	100.011777084279	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAGAGTTTGGCAACCTG	44102826	True	NA	NA	False	AAGAAA	-3	NA	44107317	44126032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_44107435_44108983_44109097_44113752_44113848_44114178_44114279_44114624_44114769_44115263_44115400_44115690_44115921_44117819_44117964_44118762_44118834_44119386_44119524_44120347_44120497_44120630_44120779_44120951_44121103_44122176_44122358_44124579_44124728_44126010
transcript_133662.nic	chr21	+	2065	15	ISM	ENSG00000241945.8	ENST00000291576.12	3188	21	-81	6453	-55	-3127	5prime_fragment	FALSE	canonical	3	228	junction_8	53.8181461696969	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCGCCAGCGCGGGGCC	44102826	True	NA	NA	False	NA	NA	NA	44107317	44124728	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_44107435_44108983_44109097_44113752_44113848_44114178_44114279_44114624_44114769_44115263_44115400_44115690_44115921_44117819_44117964_44118762_44118834_44119386_44119524_44120347_44120497_44120630_44120779_44120951_44121103_44122176_44122358_44124579
transcript_133667.known	chr21	+	1584	7	FSM	ENSG00000160221.18	ENST00000291577.11	1584	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	305.749716089629	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGCTGCATTCATCTG	44128396	True	NA	NA	False	AATAAA	-17	NA	44133682	44145711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_44133839_44134101_44134155_44136059_44136174_44137176_44137297_44140249_44140343_44143204_44143362_44144820
transcript_133670.known	chr21	+	1077	6	FSM	ENSG00000160221.18	ENST00000427803.6	1077	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	316.825125266289	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCCTGGCAGGTGAACC	NA	False	NA	NA	False	ATTAAA	-19	NA	44133617	44141417	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_44133839_44134101_44134155_44136059_44136174_44137176_44137297_44140249_44140343_44140941
transcript_133672.known	chr21	+	694	6	FSM	ENSG00000160221.18	ENST00000389690.7	694	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_5	315.244032457396	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCCTGGCAGGTGAACC	44128492	False	NA	NA	False	ATTAAA	-19	NA	44133778	44141417	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_44133839_44134101_44134155_44136059_44136174_44137176_44137297_44140249_44140343_44141163
transcript_133674.nic	chr21	+	3126	6	ISM	ENSG00000160221.18	ENST00000291577.11	1584	7	-88	5	-15	-5	intron_retention	FALSE	canonical	3	727	junction_5	62.5043998451309	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGACTTTGTGCTGCATTC	NA	False	NA	NA	False	AATAAA	-12	NA	44133594	44145706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_44133839_44134101_44134155_44136059_44136174_44137176_44137297_44140249_44140343_44143204
transcript_133676.known	chr21	+	1506	6	FSM	ENSG00000160221.18	ENST00000348499.9	1506	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	406.78957705428	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATCTGTGTGTTCAGGGT	44128393	True	NA	NA	False	AATAAA	-29	NA	44133679	44145723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_44133839_44134101_44134155_44136059_44136174_44137176_44137297_44143204_44143362_44144820
transcript_133680.known	chr21	+	807	5	FSM	ENSG00000160221.18	ENST00000480786.1	807	5	0	0	0	0	multi-exon	FALSE	canonical	3	759	junction_4	54.1589097009901	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTCTCCCAAGCCCCTTA	44128387	True	NA	NA	False	NA	NA	NA	44133673	44140604	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_44133839_44134101_44134155_44136059_44136174_44137176_44137297_44140249
transcript_13370.known	chr1	+	1085	3	FSM	ENSG00000266472.6	ENST00000614145.5	1085	3	0	0	0	0	multi-exon	FALSE	canonical	3	2125	junction_1	924.5	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGAGAAGTAAGGAATTTT	150272515	True	NA	8	True	AATAAA	-17	NA	150293860	150308979	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150293899_150294334_150294450_150308047
transcript_133714.known	chr21	+	2907	22	FSM	ENSG00000141959.17	ENST00000349048.9	2907	22	0	0	0	0	multi-exon	FALSE	canonical	3	981	junction_11	84.8875473294521	1858	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAGCCTGCAGAACTCCT	44287018	True	NA	40	True	AATAAA	-37	NA	44300052	44327373	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_44300191_44306680_44306755_44311005_44311084_44312104_44312295_44312977_44313144_44313637_44313683_44313912_44314022_44316243_44316340_44316431_44316525_44318469_44318596_44319350_44319416_44320083_44320148_44321728_44321876_44322132_44322204_44322961_44323050_44323765_44323919_44324490_44324656_44324855_44324918_44325152_44325265_44325960_44326061_44326158_44326265_44326714
transcript_13374.known	chr1	+	1462	2	FSM	ENSG00000266472.6	ENST00000581066.2	1462	2	0	0	0	0	multi-exon	FALSE	canonical	3	3974	junction_1	0	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGAGAAGTAAGGAATTTT	150272574	True	NA	8	True	AATAAA	-17	NA	150293919	150308979	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150294450_150308047
transcript_13377.nic	chr1	+	2458	17	NIC	ENSG00000117360.13	novel	2414	16	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_4	121.175734343762	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGTGATATTTTTCAC	150313067	True	NA	15	True	ATTAAA	-15	NA	150321546	150353195	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_150321593_150324894_150325088_150325750_150325882_150327556_150327653_150328319_150328467_150332683_150332768_150332978_150333200_150334934_150335242_150338159_150338327_150340397_150340478_150343308_150343453_150344161_150344262_150344433_150344548_150346017_150346137_150346407_150346492_150349156_150349219_150352832
transcript_133775.known	chr21	-	1283	7	FSM	ENSG00000160226.16	ENST00000325223.7	1283	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	11.5674351329738	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGGAGGTGACGTTTCC	-44339375	False	NA	-12	True	AATAAA	-17	NA	44339402	44329890	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_44330327_44330822_44330917_44331842_44332015_44333032_44333263_44335757_44335805_44337648_44337668_44339117
transcript_133778.known	chr21	-	2221	7	FSM	ENSG00000160226.16	ENST00000339818.9	2221	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	7.04745817062199	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGTCGTTTTAAATTGAG	-44339363	False	NA	-2	True	AGTAAA	-19	NA	44339390	44328943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_44330327_44330822_44330920_44331842_44332015_44333032_44333263_44335757_44335805_44337648_44337668_44339117
transcript_133790.known	chr21	-	1634	7	FSM	ENSG00000160226.16	ENST00000397956.7	1634	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	19.5675468285856	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGGAGGTGACGTTTCC	-44339366	False	NA	-12	True	AATAAA	-17	NA	44339393	44329890	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_44330327_44330462_44330917_44331842_44332015_44333032_44333263_44335757_44335805_44337648_44337668_44339117
transcript_133794.known	chr21	+	5845	2	FSM	ENSG00000160233.8	ENST00000291592.6	5845	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGTGTGGATTCTGTCGT	44454913	True	NA	7	True	AGTAAA	-20	NA	44455509	44462196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_44455656_44456497
transcript_133805.known	chr21	-	1034	7	FSM	ENSG00000184787.19	ENST00000477954.5	1034	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	259.427842676062	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGCTGCAGCACAGGGGAA	-44792548	True	NA	NA	False	AAGAAA	-10	NA	44801779	44770971	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_44771490_44773546_44773688_44774720_44774821_44777298_44777418_44787919_44787966_44788059_44788096_44801705
transcript_133806.known	chr21	-	744	7	FSM	ENSG00000184787.19	ENST00000491513.5	744	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	256.862479419111	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAGACTTGCAAGAACCAT	-44792592	True	NA	-26	True	NA	NA	NA	44801823	44771278	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_44771490_44773546_44773688_44777298_44777418_44779143_44779217_44787919_44787966_44788059_44788096_44801705
transcript_133807.known	chr21	-	721	7	FSM	ENSG00000184787.19	ENST00000330942.9	721	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	241.281301941669	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGGTACCAAACAAGGCA	-44792543	True	NA	-42	True	NA	NA	NA	44801774	44771294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_44771490_44773546_44773688_44777298_44777418_44787919_44787966_44788059_44788096_44801283_44801399_44801705
transcript_133814.known	chr21	-	3367	6	FSM	ENSG00000184787.19	ENST00000345496.7	3367	6	0	0	0	0	multi-exon	FALSE	canonical	3	494	junction_2	34.9536836399256	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGTTTCTGTTTTGGT	-44792589	True	NA	1	True	AATAAA	-24	NA	44801820	44768579	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_44771490_44773546_44773688_44777298_44777418_44787919_44787966_44788059_44788096_44801705
transcript_13382.known	chr1	+	2414	16	FSM	ENSG00000117360.13	ENST00000324862.7	2414	16	0	0	0	0	multi-exon	TRUE	canonical	3	209	junction_1	54.2121757541606	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGGTCTACAGGTGATC	150313053	True	NA	53	True	TTTAAA	-39	NA	150321532	150353233	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150321593_150324894_150325088_150325750_150325882_150328319_150328467_150332683_150332768_150332978_150333200_150334934_150335242_150338159_150338327_150340397_150340478_150343308_150343453_150344161_150344262_150344433_150344548_150346017_150346137_150346407_150346492_150349156_150349219_150352832
transcript_133824.known	chr21	-	933	4	FSM	ENSG00000184787.19	ENST00000497630.5	933	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	234.311758134328	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCCTGGTTCCCTGTGG	-44792588	True	NA	NA	False	NA	NA	NA	44801819	44770930	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_44771490_44773546_44773688_44777298_44777418_44801705
transcript_133828.known	chr21	-	762	4	FSM	ENSG00000184787.19	ENST00000462569.5	762	4	0	0	0	0	multi-exon	FALSE	canonical	3	531	junction_1	26.1278905896872	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACAGTTCCACATGGCTG	-44792570	True	NA	NA	False	TATAAA	-19	NA	44801801	44776833	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_44777418_44787919_44787966_44788059_44788096_44801705
transcript_133830.known	chr21	-	1512	2	FSM	ENSG00000184787.19	ENST00000490091.1	1512	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGCTGTTTCCCCATC	-44792577	True	NA	NA	False	AATAAA	-18	NA	44801808	44799989	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_44801399_44801705
transcript_133832.known	chr21	-	1921	4	FSM	ENSG00000184900.16	ENST00000411651.6	1921	4	0	0	0	0	multi-exon	FALSE	canonical	1	17	junction_2	600.614315143716	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGGCTTCTACTAAACAC	-44806238	True	NA	-34	True	AGTAAA	-20	NA	44818129	44805616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_44807041_44809046_44809119_44813861_44814105_44817947
transcript_133834.known	chr21	-	1740	4	FSM	ENSG00000184900.16	ENST00000332859.11	1740	4	0	0	0	0	multi-exon	FALSE	canonical	3	1282	junction_3	7.36357401145817	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGGCTTCTACTAAACAC	-44806171	True	NA	-34	True	AGTAAA	-20	NA	44818062	44805616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_44807041_44809046_44809119_44813975_44814105_44817947
transcript_133839.known	chr21	-	520	4	FSM	ENSG00000184900.16	ENST00000397893.3	520	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	603.406625382549	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGCTGGGATTAAAGGC	-44806077	True	NA	NA	False	NA	NA	NA	44817968	44808270	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_44808569_44809046_44809119_44813975_44814105_44817947
transcript_133842.known	chr21	-	753	2	FSM	ENSG00000184900.16	ENST00000466861.1	753	2	0	0	0	0	multi-exon	FALSE	canonical	3	1282	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGCAAGAAAGCGCGTGAT	-44806214	True	NA	NA	False	NA	NA	NA	44818105	44813509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_44814105_44817947
transcript_133843.known	chr21	-	1779	4	FSM	ENSG00000184900.16	ENST00000397898.7	1779	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	606.235011269465	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGGCTTCTACTAAACAC	-44806160	True	NA	-34	True	AGTAAA	-20	NA	44818051	44805616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_44807041_44808996_44809119_44813975_44814105_44817947
transcript_133849.known	chr21	-	2600	6	FSM	ENSG00000183255.12	ENST00000330938.8	2600	6	0	0	0	0	multi-exon	FALSE	canonical	3	854	junction_2	33.2686038180144	2465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGTTTAGTATGCTGCG	-44865416	True	NA	-15	True	AATAAA	-16	NA	44873690	44849597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_44851628_44855209_44855257_44856192_44856365_44861162_44861272_44865394_44865448_44873501
transcript_133858.known	chr21	-	2413	4	FSM	ENSG00000183255.12	ENST00000397887.7	2413	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	435.836615666416	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCGTGTTCCTGTGTTC	-44865435	True	NA	-2	True	AATAAA	-29	NA	44873709	44849584	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_44851628_44861162_44861272_44865394_44865448_44873501
transcript_133861.known	chr21	-	2497	3	FSM	ENSG00000183255.12	ENST00000445724.3	2497	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	468.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTGCGTGTTCCTGTGTT	NA	False	NA	-3	True	AATAAA	-28	NA	44873903	44849585	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_44851628_44865394_44865448_44873501
transcript_133862.known	chr21	-	2975	4	FSM	ENSG00000183250.13	ENST00000654166.2	2979	4	4	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.16024689946929	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCTGAAACTCCTGAAAAT	-44939616	True	NA	NA	False	NA	NA	NA	44939937	44933314	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_44934369_44934933_44935097_44935626_44935891_44938443
transcript_133864.known	chr21	-	3534	3	FSM	ENSG00000183250.13	ENST00000663249.1	3534	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCTGAAACTCCTGAAAAT	-44939610	True	NA	NA	False	NA	NA	NA	44939931	44933314	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_44935097_44935626_44935891_44938443
transcript_133865.known	chr21	-	2348	3	FSM	ENSG00000183250.13	ENST00000660377.2	2403	3	55	0	27	0	multi-exon	FALSE	canonical	1	5	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCCTGAAAATCTTGAAAT	-44939565	True	NA	NA	False	NA	NA	NA	44939886	44933306	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_44935097_44935626_44935891_44939592
transcript_133871.known	chr21	+	880	6	FSM	ENSG00000160256.13	ENST00000397826.7	880	6	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_2	72.9492974606336	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGGGCTGGGCACACC	44928283	True	NA	4	True	NA	NA	NA	44940011	44976989	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_44940187_44943683_44943793_44960099_44960169_44967033_44967182_44973196_44973266_44976679
transcript_133872.known	chr21	+	892	6	FSM	ENSG00000160256.13	ENST00000291634.11	892	6	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_2	69.8896272704326	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTGCTTCCCTGATTCA	44928300	True	NA	-12	True	AATAAA	-42	NA	44940028	44976973	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_44940187_44943683_44943838_44960099_44960169_44967033_44967182_44973196_44973266_44976679
transcript_133876.nnic	chr21	+	869	5	NIC	ENSG00000160256.13	novel	880	6	NA	NA	-74	0	combination_of_known_splicesites	FALSE	canonical	3	52	junction_4	135.763351092996	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTGCTTCCCTGATTCA	44939903	True	NA	-12	True	AATAAA	-42	NA	44939937	44976973	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_+_44940187_44943683_44943793_44960099_44960169_44967033_44967182_44976679
transcript_133877.nnic	chr21	+	914	5	NIC	ENSG00000160256.13	novel	892	6	NA	NA	-74	0	combination_of_known_splicesites	FALSE	canonical	3	52	junction_4	134.675536011556	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTGCTTCCCTGATTCA	44939903	True	NA	-12	True	AATAAA	-42	NA	44939937	44976973	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_+_44940187_44943683_44943838_44960099_44960169_44967033_44967182_44976679
transcript_133896.known	chr21	+	3563	13	FSM	ENSG00000197381.17	ENST00000389863.8	3563	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	22.9619250064101	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGTTGCTGAGACTT	45073691	True	NA	7	True	AATAAA	-18	NA	45074599	45226560	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_45074794_45128401_45128574_45171609_45171685_45175729_45176665_45180329_45180445_45182584_45182754_45183361_45183511_45184473_45184594_45184922_45185092_45204554_45204737_45220835_45221015_45222017_45222108_45225546
transcript_133899.nic	chr21	+	3026	12	ISM	ENSG00000197381.17	ENST00000437626.5	5032	13	-4	3979	-4	-3979	5prime_fragment	FALSE	canonical	0	0	junction_8	20.5047867824012	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTAGGAATGTGGTTTAT	45073687	True	NA	2	True	AATAAA	-12	NA	45074595	45222580	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_45074794_45128401_45128574_45171609_45171685_45175729_45176665_45180329_45180445_45182584_45182754_45183361_45183511_45184473_45184594_45184922_45185092_45204554_45204737_45220835_45221015_45222017
transcript_133906.known	chr21	+	6902	11	FSM	ENSG00000197381.17	ENST00000348831.9	6902	11	0	0	0	0	multi-exon	FALSE	canonical	1	14	junction_9	16.1987653850533	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGTTGCTGAGACTT	45073671	True	NA	7	True	AATAAA	-18	NA	45074579	45226560	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_45074794_45128401_45128574_45171609_45171685_45175729_45176665_45180329_45180445_45182584_45182754_45183361_45183511_45184922_45185092_45204554_45204737_45220835_45221015_45222017
transcript_133925.known	chr21	-	3077	10	FSM	ENSG00000186866.17	ENST00000334538.13	3077	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	56.4348198268488	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGGAGTGTAGACTCAT	-45286041	True	NA	-12	True	AATAAA	-21	NA	45287898	45263927	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_45265636_45266021_45266228_45267589_45267714_45269838_45270020_45277016_45277143_45278102_45278170_45282348_45282460_45283382_45283528_45285677_45285929_45287740
transcript_13393.known	chr1	+	8186	11	FSM	ENSG00000163125.16	ENST00000369068.5	8186	11	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	15.1736613907125	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGACATTTTTCTTTGA	150362555	True	NA	14	True	AATAAA	-16	NA	150364146	150476566	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150364920_150417595_150417726_150440922_150441024_150441880_150441959_150443230_150443284_150444250_150444378_150446225_150446402_150457287_150457571_150460059_150460318_150464526_150464728_150470560
transcript_133936.known	chr21	-	2959	10	FSM	ENSG00000186866.17	ENST00000612472.4	2959	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	68.3359529759833	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTGGAGTGTAGACTCA	-45286039	True	NA	-13	True	AATAAA	-20	NA	45287896	45263928	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_45265636_45267589_45267714_45269838_45270020_45277016_45277143_45278102_45278170_45282348_45282460_45283351_45283528_45285268_45285329_45285677_45285929_45287740
transcript_133941.nnic	chr21	-	2862	9	NIC	ENSG00000186866.17	novel	2861	9	NA	NA	-28	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_6	49.5894078912019	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTAGCTGTGGAGTGTA	-45287901	False	NA	-19	True	AATAAA	-14	NA	45287926	45263934	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_45265636_45267589_45267714_45269838_45270020_45277016_45277143_45278102_45278170_45282348_45282399_45283351_45283528_45285677_45285929_45287740
transcript_133943.nic	chr21	-	2923	9	NIC	ENSG00000186866.17	novel	2861	9	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_6	47.5893895737275	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTAGCTGTGGAGTGTA	-45287901	False	NA	-19	True	AATAAA	-14	NA	45287926	45263934	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_45265636_45267589_45267714_45269838_45270020_45277016_45277143_45278102_45278170_45282348_45282460_45283351_45283528_45285677_45285929_45287740
transcript_133945.known	chr21	-	2861	9	FSM	ENSG00000186866.17	ENST00000349485.10	2861	9	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	25.5633404507314	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTAGCTGTGGAGTGTA	-45286038	True	NA	-19	True	AATAAA	-14	NA	45287895	45263934	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_45265636_45267589_45267714_45269838_45270020_45277016_45277143_45278102_45278170_45282348_45282460_45283382_45283528_45285677_45285929_45287740
transcript_133948.known	chr21	-	4825	8	FSM	ENSG00000186866.17	ENST00000331343.11	4825	8	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_6	23.9386972178896	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGGAGTGTAGACTCAT	-45286041	True	NA	-12	True	AATAAA	-21	NA	45287898	45263927	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_45267714_45269838_45270020_45277016_45277143_45278102_45278170_45282348_45282460_45283382_45283528_45285677_45285929_45287740
transcript_133957.known	chr21	+	389	3	FSM	ENSG00000223768.3	ENST00000454115.7	480	3	17	74	2	-74	multi-exon	FALSE	canonical	2	6	junction_1	2.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGACCTCAGTCGGACACA	45287116	True	NA	NA	False	NA	NA	NA	45288051	45290578	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_45288245_45289350_45289439_45290470
transcript_133958.known	chr21	+	7540	3	FSM	ENSG00000223768.3	ENST00000400362.3	7540	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATACAACTATATATTACA	45287114	True	NA	NA	False	TATAAA	-45	NA	45288049	45297806	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_45288166_45289350_45289439_45290470
transcript_13397.known	chr1	+	7605	10	FSM	ENSG00000163125.16	ENST00000401000.8	7605	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	13.6010166649772	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGACATTTTTCTTTGA	150364563	False	NA	14	True	AATAAA	-16	NA	150364649	150476566	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150364920_150417595_150417726_150440922_150441024_150443230_150443284_150444250_150444378_150446225_150446402_150457287_150457571_150460059_150460318_150464526_150464728_150470560
transcript_133984.known	chr21	+	5408	42	FSM	ENSG00000182871.16	ENST00000651438.1	5408	42	0	0	0	0	multi-exon	FALSE	canonical	3	1137	junction_8	193.473284866848	649	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGGTTTGCAAGCAGCC	45380178	True	NA	18	True	AATAAA	-19	NA	45405164	45513720	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_45405242_45405378_45405474_45468241_45468787_45473894_45473982_45475475_45475536_45476350_45476481_45477410_45477488_45477749_45477966_45478326_45478354_45479901_45479965_45480069_45480157_45480466_45480521_45480699_45480859_45481962_45482026_45482794_45482822_45486860_45486993_45487446_45487510_45488417_45488445_45489485_45489522_45490274_45490347_45490835_45490872_45491224_45491315_45492534_45492565_45492686_45492714_45493162_45493226_45493500_45493576_45494544_45494572_45494861_45494916_45495357_45495433_45496499_45496569_45497049_45497093_45497598_45497662_45504010_45504055_45504415_45504557_45505133_45505279_45505357_45505432_45505837_45505967_45507560_45507594_45509355_45509602_45510063_45510262_45511110_45511227_45512187
transcript_134.known	SIRV4001	+	3997	1	FSM	SIRV4001A	SIRV4001	3997	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	3997	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV4001_+_0_4000
transcript_13407.known	chr1	+	2727	18	FSM	ENSG00000143374.18	ENST00000369064.8	2727	18	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_8	43.8782524499584	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGGTCATATGTCTTC	150485462	True	NA	15	True	AATAAA	-29	NA	150487418	150507602	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150487517_150487857_150488055_150488963_150489088_150490600_150490726_150491393_150491512_150491597_150491663_150492410_150492490_150496481_150496629_150496809_150496909_150497529_150497748_150498501_150498665_150498896_150499035_150499215_150499294_150504334_150504436_150504631_150504734_150504905_150504979_150505590_150505706_150506915
transcript_134076.known	chr21	-	1884	6	FSM	ENSG00000173638.19	ENST00000380010.8	1884	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	101.871683995112	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCGCAGGGCTTCTGATT	-45536807	True	NA	-5	True	ATTAAA	-15	NA	45542471	45514714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_45515153_45525816_45525959_45530769_45530972_45531388_45532149_45537770_45538009_45542367
transcript_134087.nnic	chr21	-	2946	6	NNC	ENSG00000173638.19	novel	4991	6	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_4	103.288721552743	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCGCAGGGCTTCTGATT	-45536773	True	NA	-5	True	ATTAAA	-15	NA	45542437	45514714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr21_-_45516141_45525816_45525959_45530769_45530972_45531388_45532149_45537770_45538009_45542259
transcript_134088.known	chr21	-	4991	6	FSM	ENSG00000173638.19	ENST00000311124.9	4991	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	84.7891502493096	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGGCTTCCTTTTATT	-45536776	True	NA	-21	True	AATACA	-1	NA	45542440	45512564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_45516141_45525816_45525959_45530769_45530972_45531388_45532149_45537770_45538009_45542367
transcript_134106.known	chr21	+	2282	18	FSM	ENSG00000183570.17	ENST00000681687.1	2282	18	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	18.9461082362853	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCACCGGCTCTGGCTTGTC	45643267	True	NA	1	True	AATAAA	-15	NA	45643724	45942450	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_45643869_45668873_45668953_45735391_45735430_45755416_45755453_45849960_45850096_45896207_45896363_45899598_45899623_45900590_45900624_45900996_45901114_45909354_45909487_45910901_45911031_45913950_45914026_45917587_45917630_45929916_45929996_45930785_45930846_45935252_45935306_45940029_45940200_45941669
transcript_134116.known	chr21	+	2202	16	FSM	ENSG00000183570.17	ENST00000400314.5	2202	16	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_2	12.2412780741591	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGCTCTGGCTTGTCTCTG	45643236	True	NA	5	True	AATAAA	-19	NA	45643693	45942454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_45643869_45735391_45735430_45849960_45850096_45896207_45896363_45899598_45899623_45900590_45900624_45900996_45901114_45909354_45909487_45910901_45911031_45913950_45914026_45917587_45917630_45929916_45929996_45930785_45930846_45935252_45935306_45940029_45940200_45941669
transcript_134124.known	chr21	+	1986	14	FSM	ENSG00000183570.17	ENST00000400309.5	1986	14	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_9	13.3350097565431	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGCTCTGGCTTGTCTCTG	NA	False	NA	5	True	AATAAA	-19	NA	45849960	45942454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_45850096_45896207_45896363_45899598_45899623_45900590_45900624_45900996_45901114_45909354_45909487_45910901_45911031_45913950_45914026_45917587_45917630_45929919_45929996_45930785_45930846_45935252_45935306_45940029_45940200_45941669
transcript_134135.known	chr21	+	4203	35	FSM	ENSG00000142156.16	ENST00000361866.8	4203	35	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_29	173.44610413054	1140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTGGTTATCTTCCCC	45972977	True	NA	22	True	AATAAA	-15	NA	45981769	46005048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_45981948_45982633_45982764_45984268_45984470_45986525_45986686_45986943_45987073_45987154_45987176_45987498_45987520_45987609_45987655_45989083_45989138_45989607_45989653_45989751_45989779_45990257_45990285_45990377_45990423_45990772_45990827_45990978_45991042_45992009_45992073_45992163_45992218_45992362_45992399_45992747_45992811_45994166_45994230_45997420_45997484_45997699_45997763_45998120_45998172_45998397_45998434_45998896_45998960_45999152_45999219_45999656_45999693_46000330_46000368_46000758_46000768_46001252_46001387_46001960_46002071_46002217_46002402_46002526_46002711_46003119_46003150_46003390
transcript_13417.nnic	chr1	+	2624	17	NIC	ENSG00000143374.18	novel	2727	18	NA	NA	-39	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_7	80.2495862528275	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGGTCATATGTCTTC	150485418	True	NA	15	True	AATAAA	-29	NA	150487374	150507602	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_150487517_150487857_150488055_150488963_150489088_150490600_150490726_150491393_150491512_150491597_150491663_150492410_150492490_150496809_150496909_150497529_150497748_150498501_150498665_150498896_150499035_150499215_150499294_150504334_150504436_150504631_150504734_150504905_150504979_150505590_150505706_150506915
transcript_134202.known	chr21	+	2358	6	FSM	ENSG00000142156.16	ENST00000498614.5	2358	6	0	0	0	0	multi-exon	FALSE	canonical	3	914	junction_2	32.7206356906464	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGTTATCTTCCCCAC	46001184	False	NA	24	True	AATAAA	-17	NA	46001196	46005050	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46001387_46001960_46002071_46002217_46002402_46002526_46002711_46003119_46003150_46003390
transcript_134205.nic	chr21	+	3166	28	NIC	ENSG00000142173.16	novel	3101	27	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_27	86.8527600047285	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGAGTCCTTCTTTGCTG	46092891	True	NA	22	True	NA	NA	NA	46098108	46129808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_+_46098174_46111449_46111592_46111978_46112578_46112803_46112825_46114007_46114074_46115871_46115926_46116008_46116054_46116376_46116404_46116650_46116678_46116769_46116815_46117399_46117454_46117873_46117937_46118613_46118677_46119029_46119120_46119787_46119851_46120514_46120578_46121060_46121124_46121555_46121619_46122107_46122159_46122495_46122532_46122874_46122938_46124650_46124714_46124884_46124921_46125265_46125312_46125464_46125618_46125784_46126238_46126502_46126542_46129195
transcript_134206.known	chr21	+	3445	28	FSM	ENSG00000142173.16	ENST00000300527.9	3445	28	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_1	51.6856861315745	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCGTGCCTGCTTGCGAGC	46092894	True	NA	14	True	AATAAA	-14	NA	46098111	46132848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46098174_46111449_46111592_46111978_46112578_46112803_46112825_46114007_46114074_46115871_46115926_46116008_46116054_46116376_46116404_46116650_46116678_46116769_46116815_46117399_46117454_46117873_46117937_46118613_46118677_46119029_46119120_46119787_46119851_46120514_46120578_46121060_46121124_46121555_46121619_46122107_46122159_46122495_46122532_46122874_46122938_46124650_46124714_46124884_46124921_46125265_46125312_46125464_46125618_46125784_46126238_46126502_46126542_46131953
transcript_134212.known	chr21	+	3101	27	FSM	ENSG00000142173.16	ENST00000397763.5	3101	27	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_26	84.0298358537577	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGAGTCCTTCTTTGCTG	NA	False	NA	22	True	NA	NA	NA	46111449	46129808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46111592_46111978_46112578_46112803_46112825_46114007_46114074_46115871_46115926_46116008_46116054_46116376_46116404_46116650_46116678_46116769_46116815_46117399_46117454_46117873_46117937_46118613_46118677_46119029_46119120_46119787_46119851_46120514_46120578_46121060_46121124_46121555_46121619_46122107_46122159_46122495_46122532_46122874_46122938_46124650_46124714_46124884_46124921_46125265_46125312_46125464_46125618_46125784_46126238_46126502_46126542_46129195
transcript_134221.known	chr21	-	1182	4	FSM	ENSG00000160284.15	ENST00000330205.10	1182	4	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_2	40.0998753115268	433	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGGCTCTTTGAGGGCG	-46175986	True	NA	1	True	ATTAAA	-27	NA	46184476	46161147	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_46161706_46161915_46162068_46168307_46168659_46184355
transcript_134233.known	chr21	-	4886	22	FSM	ENSG00000160285.15	ENST00000397728.8	4886	22	0	0	0	0	multi-exon	TRUE	canonical	3	282	junction_21	55.9636665416868	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGAATTCAGATTATTT	-46227347	False	NA	-1	True	ATTAAA	-17	NA	46228774	46188445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_46191236_46191880_46191960_46194490_46194662_46195675_46195757_46196201_46196268_46205835_46205942_46206671_46206769_46207427_46207578_46208250_46208302_46209553_46209626_46210687_46210745_46213024_46213053_46213737_46213836_46215179_46215299_46215684_46215794_46216388_46216525_46219475_46219573_46221853_46221976_46222629_46222739_46227551_46227691_46228433_46228600_46228731
transcript_134235.known	chr21	-	2523	22	FSM	ENSG00000160285.15	ENST00000522411.5	2523	22	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_18	109.743692322316	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTTTTCTGACCAATAGC	-46227354	False	NA	NA	False	NA	NA	NA	46228781	46190782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_46191236_46191880_46191960_46194490_46194662_46195675_46195757_46196201_46196268_46205835_46205942_46206671_46206769_46207427_46207578_46208250_46208302_46209553_46209626_46210687_46210745_46213024_46213053_46213737_46213836_46215179_46215299_46215684_46215794_46216388_46216525_46219475_46219573_46221853_46221976_46222662_46222739_46227551_46227691_46228433_46228600_46228731
transcript_134243.known	chr21	-	4390	21	FSM	ENSG00000160285.15	ENST00000457828.6	4390	21	0	0	0	0	multi-exon	FALSE	canonical	3	451	junction_5	28.111341127737	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCACACTGTGTTTCGT	-46227397	False	NA	-6	True	AATAAA	-26	NA	46228824	46189123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_46191236_46191880_46191960_46194490_46194662_46195675_46195757_46196201_46196268_46205835_46205942_46206671_46206769_46207427_46207578_46208250_46208302_46209553_46209626_46210687_46210745_46213024_46213053_46213737_46213836_46215179_46215299_46215684_46215794_46216388_46216525_46219475_46219573_46221853_46221976_46222629_46222739_46227551_46227691_46228433
transcript_134245.nic	chr21	-	4257	21	ISM	ENSG00000160285.15	ENST00000522411.5	2523	22	56	-1658	37	0	3prime_fragment	FALSE	canonical	3	57	junction_18	102.814335090006	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTCACACTGTGTTTCG	-46227298	False	NA	-7	True	AATAAA	-25	NA	46228725	46189124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_-_46191236_46191880_46191960_46194490_46194662_46195675_46195757_46196201_46196268_46205835_46205942_46206671_46206769_46207427_46207578_46208250_46208302_46209553_46209626_46210687_46210745_46213024_46213053_46213737_46213836_46215179_46215299_46215684_46215794_46216388_46216525_46219475_46219573_46221853_46221976_46222662_46222739_46227551_46227691_46228433
transcript_134249.nnic	chr21	-	4232	21	NIC	ENSG00000160285.15	novel	4886	22	NA	NA	-41	0	combination_of_known_splicesites	FALSE	canonical	3	90	junction_4	106.072746264062	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTCACACTGTGTTTCG	NA	False	NA	-7	True	AATAAA	-25	NA	46228865	46189124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_46191236_46191880_46191960_46194490_46194662_46195675_46195757_46205835_46205942_46206671_46206769_46207427_46207578_46208250_46208302_46209553_46209626_46210687_46210745_46213024_46213053_46213737_46213836_46215179_46215299_46215684_46215794_46216388_46216525_46219475_46219573_46221853_46221976_46222629_46222739_46227551_46227691_46228433_46228600_46228731
transcript_134256.nnic	chr21	-	4263	20	NIC	ENSG00000160285.15	novel	4390	21	NA	NA	-2	0	intron_retention	FALSE	canonical	3	90	junction_4	97.9099309091633	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTCACACTGTGTTTCG	-46227337	False	NA	-7	True	AATAAA	-25	NA	46228764	46189124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_46191236_46191880_46191960_46194490_46194662_46195675_46195757_46205835_46205942_46206671_46206769_46207427_46207578_46208250_46208302_46209553_46209626_46210687_46210745_46213024_46213053_46213737_46213836_46215179_46215299_46215684_46215794_46216388_46216525_46219475_46219573_46221853_46221976_46222629_46222739_46227551_46227691_46228433
transcript_134282.nic	chr21	-	6982	29	NIC	ENSG00000160294.11	novel	6333	29	NA	NA	-197	0	combination_of_known_junctions	FALSE	canonical	3	83	junction_28	58.0439115090059	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCCCAGTTTTTCATAAT	-46286445	True	NA	-7	True	GATAAA	-15	NA	46286494	46235132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_46235427_46236828_46236980_46240810_46241018_46242801_46242932_46243464_46243723_46244806_46245198_46246306_46246405_46246627_46246887_46251528_46251683_46254391_46254527_46254775_46254845_46256788_46256987_46258938_46259092_46260792_46260907_46261279_46261412_46264116_46264218_46265320_46265524_46265924_46266167_46266981_46267143_46270400_46270564_46272560_46272830_46273387_46273586_46275185_46275326_46277526_46277718_46279992_46280138_46280496_46280576_46283614_46283839_46284067_46285395_46285698
transcript_134283.nic	chr21	-	6678	29	NIC	ENSG00000160294.11	novel	6333	29	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	80	junction_28	58.3459510163302	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCCCAGTTTTTCATAAT	-46278531	True	NA	-7	True	GATAAA	-15	NA	46286294	46235132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_-_46235427_46236828_46236980_46240810_46241018_46242801_46242932_46243464_46243723_46244806_46245198_46246306_46246405_46246627_46246887_46251528_46251683_46254391_46254527_46254775_46254845_46256788_46256987_46258938_46259092_46260792_46260907_46261279_46261412_46264116_46264218_46265320_46265524_46265924_46266167_46266981_46267143_46270400_46270564_46272560_46272830_46273387_46273586_46275185_46275326_46277526_46277718_46279992_46280138_46280496_46280576_46283614_46283839_46284067_46285395_46285802
transcript_134298.known	chr21	+	3213	4	FSM	ENSG00000215424.10	ENST00000664725.1	3213	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	10.1434160364686	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGAAACCTTACCTTAGT	46228317	True	NA	NA	False	ATTAAA	-3	NA	46229228	46246292	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46229267_46236223_46236327_46240833_46241020_46243406
transcript_134299.known	chr21	+	2621	4	FSM	ENSG00000215424.10	ENST00000669476.1	2621	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	9.41629792788369	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACTCGTTCTTTTTTTTTT	46228309	True	NA	NA	False	TTTAAA	-16	NA	46229220	46251871	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46229267_46236223_46236327_46240833_46241020_46249585
transcript_1343.known	chr1	-	937	6	FSM	ENSG00000008130.15	ENST00000492845.6	937	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	206.484285116326	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGGGAAACGACCTCGCC	-1779772	False	NA	NA	False	NA	NA	NA	1779962	1756003	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1756344_1756502_1756609_1757180_1757311_1761951_1762036_1765227_1765447_1779904
transcript_134304.known	chr21	+	3051	3	FSM	ENSG00000215424.10	ENST00000670190.1	3051	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTCAAGATACAGCAAAAG	46228317	True	NA	NA	False	AATATA	-6	NA	46229228	46246236	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46229267_46240836_46241020_46243406
transcript_134305.known	chr21	+	2386	3	FSM	ENSG00000215424.10	ENST00000656253.1	2386	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATAAAGACTTTCAGGAAA	46228312	True	NA	NA	False	AAAACA	-44	NA	46229223	46251745	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46229267_46240836_46241020_46249585
transcript_134306.known	chr21	+	703	3	FSM	ENSG00000215424.10	ENST00000590829.5	703	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	3.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGCAGTGAGCAGAGATC	46228305	True	NA	NA	False	NA	NA	NA	46229216	46259390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46229267_46240833_46241020_46258923
transcript_134307.known	chr21	+	2302	3	FSM	ENSG00000215424.10	ENST00000432735.5	2302	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	11	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CACACACAAAAAAACAAAAA	46228322	True	NA	NA	False	GATAAA	-41	NA	46229233	46242999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46229267_46236223_46236327_46240833
transcript_134308.known	chr21	+	2193	2	FSM	ENSG00000215424.10	ENST00000444998.1	2193	2	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CACACACAAAAAAACAAAAA	46228328	True	NA	NA	False	GATAAA	-41	NA	46229239	46242999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46229267_46240833
transcript_134309.known	chr21	-	199	2	FSM	ENSG00000160294.11	ENST00000495475.1	199	2	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGATGAACCCAACTAATC	-46285869	False	NA	NA	False	NA	NA	NA	46285897	46285290	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_46285395_46285802
transcript_13431.known	chr1	+	2162	16	FSM	ENSG00000143374.18	ENST00000606933.5	2162	16	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_7	73.0836963122875	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGCCAGGCGCAGTGGCT	150485463	True	NA	NA	False	AATAAA	-1	NA	150487419	150507284	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150487517_150487857_150488055_150488963_150489088_150490600_150490726_150491393_150491512_150491597_150491663_150492410_150492490_150497529_150497748_150498501_150498665_150498896_150499035_150499215_150499294_150504334_150504436_150504631_150504734_150504905_150504979_150505590_150505706_150506915
transcript_134310.known	chr21	-	876	2	FSM	ENSG00000160294.11	ENST00000426537.1	876	2	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACCTCTGGGCCTTCAAG	-46278421	True	NA	NA	False	NA	NA	NA	46286184	46285004	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_46285395_46285698
transcript_134311.known	chr21	+	2280	2	FSM	ENSG00000215424.10	ENST00000421927.1	2280	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CACACACAAAAAAACAAAAA	46228335	True	NA	NA	False	GATAAA	-41	NA	46229246	46242999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46229364_46240836
transcript_134312.known	chr21	+	739	5	FSM	ENSG00000182362.14	ENST00000397701.9	739	5	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_1	26.6364412037344	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCATCGGGTATTTTTC	46284148	True	NA	37	True	AATAAA	-44	NA	46286341	46297751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46286416_46286869_46287124_46291333_46291463_46296161_46296231_46297538
transcript_134317.known	chr21	+	764	5	FSM	ENSG00000182362.14	ENST00000397691.1	764	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	118.592527167609	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCATCGGGTATTTTTC	46285826	True	NA	37	True	AATAAA	-44	NA	46286644	46297751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46286744_46286869_46287124_46291333_46291463_46296161_46296231_46297538
transcript_134321.nic	chr21	+	1083	4	NIC	ENSG00000182362.14	novel	739	5	NA	NA	-501	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_2	106.887271875041	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGGGGAACCTCCTCTTAT	46285762	True	NA	9	True	AATAAA	-16	NA	46285840	46297723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr21_+_46286416_46286869_46287124_46296161_46296231_46297538
transcript_134323.known	chr21	+	890	4	FSM	ENSG00000182362.14	ENST00000339195.10	890	4	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	120.932488052908	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCATCGGGTATTTTTC	46284190	True	NA	37	True	AATAAA	-44	NA	46286383	46297751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46286738_46286869_46287124_46296161_46296231_46297538
transcript_134324.known	chr21	+	912	3	FSM	ENSG00000182362.14	ENST00000468924.5	912	3	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_1	8.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGCAGAAAGGCTGGAGT	46284161	True	NA	NA	False	NA	NA	NA	46286354	46291930	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46286416_46286869_46287124_46291333
transcript_134325.known	chr21	+	1402	3	FSM	ENSG00000182362.14	ENST00000492864.1	1402	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	102	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGGTTGTACTATTGACG	46284260	False	NA	NA	False	AAAACA	-16	NA	46286453	46292197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46286738_46286869_46287124_46291333
transcript_134326.known	chr21	+	433	4	FSM	ENSG00000182362.14	ENST00000397692.5	433	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	137.528178930719	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCATCGGGTATTTTTC	46284190	True	NA	37	True	AATAAA	-44	NA	46286383	46297751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46286416_46286869_46286989_46296161_46296231_46297538
transcript_134344.known	chr21	-	2970	8	FSM	ENSG00000160298.18	ENST00000291691.12	2970	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	15.4457576237434	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTATGACGTGATCCC	-46321375	True	NA	-7	True	AATAAA	-22	NA	46323870	46301129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_46302155_46302484_46302577_46311455_46311568_46314715_46314881_46315473_46315548_46317207_46317269_46318011_46318221_46322638
transcript_134352.nic	chr21	+	2381	14	ISM	ENSG00000160299.17	ENST00000359568.10	10526	47	-60	82196	-45	10247	5prime_fragment	FALSE	canonical	3	24	junction_1	6.06961585987042	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGACTGGAAAGTTATGAAG	46321071	True	NA	28	True	AAGAAA	-6	NA	46324095	46363573	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_46324283_46326376_46326590_46334396_46334769_46346127_46346209_46346742_46346999_46347456_46347513_46349011_46349187_46349683_46349821_46351428_46351541_46353103_46353327_46353986_46354069_46355451_46355627_46356973_46357192_46363479
transcript_134353.nic	chr21	+	2229	13	ISM	ENSG00000160299.17	ENST00000359568.10	10526	47	-60	88636	-45	3807	5prime_fragment	FALSE	canonical	3	24	junction_1	6.19755776271768	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAATTTGTATGGGAAGT	46321071	True	NA	NA	False	AATAGA	-4	NA	46324095	46357133	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_46324283_46326376_46326590_46334396_46334769_46346127_46346209_46346742_46346999_46347456_46347513_46349011_46349187_46349683_46349821_46351428_46351541_46353103_46353327_46353986_46354069_46355451_46355627_46356973
transcript_134355.nic	chr21	+	2619	13	ISM	ENSG00000160299.17	ENST00000480896.5	10485	47	-254	88636	-254	3807	5prime_fragment	FALSE	canonical	3	10	junction_1	9.20258115965298	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAATTTGTATGGGAAGT	46324616	False	NA	NA	False	AATAGA	-4	NA	46324633	46357133	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_46325211_46326376_46326590_46334396_46334769_46346127_46346209_46346742_46346999_46347456_46347513_46349011_46349187_46349683_46349821_46351428_46351541_46353103_46353327_46353986_46354069_46355451_46355627_46356973
transcript_134365.nic	chr21	+	1457	8	ISM	ENSG00000160299.17	ENST00000359568.10	10526	47	-60	95969	-45	0	5prime_fragment	FALSE	canonical	3	24	junction_1	7.36234212955721	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAGAAAAACAGCTGGAG	46321071	True	NA	NA	False	NA	NA	NA	46324095	46349800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_46324283_46326376_46326590_46334396_46334769_46346127_46346209_46346742_46346999_46347456_46347513_46349011_46349187_46349683
transcript_134367.nic	chr21	+	1847	8	ISM	ENSG00000160299.17	ENST00000480896.5	10485	47	-254	95969	-254	0	5prime_fragment	FALSE	canonical	3	10	junction_1	11.3605116297549	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAGAAAAACAGCTGGAG	46324616	False	NA	NA	False	NA	NA	NA	46324633	46349800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_46325211_46326376_46326590_46334396_46334769_46346127_46346209_46346742_46346999_46347456_46347513_46349011_46349187_46349683
transcript_134371.known	chr21	+	1415	8	FSM	ENSG00000160299.17	ENST00000490468.5	1415	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	16.3045004429414	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAGAAAAACAGCTGGAG	46321116	True	NA	NA	False	NA	NA	NA	46324140	46349800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46324283_46326376_46326590_46334396_46334769_46346127_46346209_46346722_46346982_46347456_46347513_46349011_46349187_46349683
transcript_134372.known	chr21	+	10526	47	FSM	ENSG00000160299.17	ENST00000359568.10	10526	47	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_17	46.7095356253569	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTGTGTTGTTTTTTTT	46321131	True	NA	36	True	AATAAA	-28	NA	46324155	46445769	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46324283_46326376_46326590_46334396_46334769_46346127_46346209_46346742_46346999_46347456_46347513_46349011_46349187_46349683_46349821_46351428_46351541_46353103_46353327_46353986_46354069_46355451_46355627_46356973_46357192_46363479_46363935_46366583_46367140_46381693_46381841_46385831_46385984_46388741_46388885_46389198_46389432_46390669_46390833_46391163_46391377_46397264_46397495_46398013_46398131_46398234_46398256_46399589_46399797_46401550_46401722_46402330_46402484_46411188_46412068_46412836_46412993_46416068_46416840_46418203_46418307_46421969_46422125_46425830_46425972_46427621_46427796_46428394_46428591_46430009_46430233_46430506_46430658_46431528_46432216_46435903_46436149_46436978_46437082_46438163_46438338_46440082_46440203_46440854_46441085_46442496_46442574_46443809_46443949_46444693_46444822_46445283
transcript_134379.nic	chr21	+	3684	29	ISM	ENSG00000160305.18	ENST00000651436.1	6946	39	-43	13588	-39	-2741	5prime_fragment	FALSE	canonical	2	39	junction_8	14.3896221107365	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGATAGCAAGCGTTTTCA	46458817	True	NA	NA	False	NA	NA	NA	46458851	46555997	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_46459223_46484756_46484829_46490599_46490720_46496987_46497108_46498581_46498834_46504360_46504490_46509256_46509377_46511416_46511615_46529091_46529184_46532126_46532238_46533523_46533648_46534003_46534114_46534584_46534688_46537223_46537289_46537445_46537540_46538482_46538603_46539876_46539992_46541755_46541896_46545136_46545274_46545880_46545962_46546914_46547043_46549770_46549886_46550542_46550745_46551633_46551744_46551823_46551905_46554168_46554293_46554574_46554697_46554821_46554934_46555981
transcript_134380.nic	chr21	+	3668	28	ISM	ENSG00000160305.18	ENST00000651436.1	6946	39	-43	14652	-39	-3805	5prime_fragment	FALSE	canonical	2	39	junction_8	14.5294743243746	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCGTGTCCTCGCACTGCC	46458817	True	NA	NA	False	NA	NA	NA	46458851	46554933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_46459223_46484756_46484829_46490599_46490720_46496987_46497108_46498581_46498834_46504360_46504490_46509256_46509377_46511416_46511615_46529091_46529184_46532126_46532238_46533523_46533648_46534003_46534114_46534584_46534688_46537223_46537289_46537445_46537540_46538482_46538603_46539876_46539992_46541755_46541896_46545136_46545274_46545880_46545962_46546914_46547043_46549770_46549886_46550542_46550745_46551633_46551744_46551823_46551905_46554168_46554293_46554574_46554697_46554821
transcript_134384.known	chr21	+	3044	22	FSM	ENSG00000160305.18	ENST00000457905.7	3044	22	0	0	0	0	multi-exon	FALSE	canonical	2	39	junction_8	12.6261435574678	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCTCAATATTTATTTTT	46456077	True	NA	NA	False	AATATA	-19	NA	46458949	46550110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46459223_46484756_46484829_46490599_46490720_46496987_46497108_46498581_46498834_46504360_46504490_46509256_46509377_46511416_46511615_46529091_46529184_46532126_46532238_46533523_46533648_46534003_46534114_46534584_46534688_46537223_46537289_46537445_46537540_46538482_46538603_46539876_46539992_46541755_46541896_46545136_46545274_46545880_46545962_46546914_46547043_46549770
transcript_134386.known	chr21	+	2760	21	FSM	ENSG00000160305.18	ENST00000435722.7	2760	21	0	0	0	0	multi-exon	FALSE	canonical	2	39	junction_8	12.4236669305	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACCAGAGTTAATATCCT	46459028	False	NA	7	True	AGTAAA	-21	NA	46459056	46547205	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46459223_46484756_46484829_46490599_46490720_46496987_46497108_46498581_46498834_46504360_46504490_46509256_46509377_46511416_46511615_46529091_46529184_46532126_46532238_46533523_46533648_46534003_46534114_46534584_46534688_46537223_46537289_46537445_46537540_46538482_46538603_46539876_46539992_46541755_46541896_46545136_46545274_46545880_46545962_46546914
transcript_134389.known	chr21	+	2711	20	FSM	ENSG00000160305.18	ENST00000466639.5	2711	20	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_5	16.9525980816349	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACCAGAGTTAATATCCT	46456104	True	NA	7	True	AGTAAA	-21	NA	46458976	46547205	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46459223_46484756_46484829_46490599_46490720_46496987_46497108_46498581_46498834_46509256_46509377_46511416_46511615_46529091_46529184_46532126_46532238_46533523_46533648_46534003_46534114_46534584_46534688_46537223_46537289_46537445_46537540_46538482_46538603_46539876_46539992_46541755_46541896_46545136_46545274_46545880_46545962_46546914
transcript_134394.known	chr21	-	1109	3	FSM	ENSG00000160307.10	ENST00000291700.9	1109	3	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCGAGGCAGGTGGATCAC	-46604928	True	NA	NA	False	AATAAA	-18	NA	46605082	46598603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_-_46599504_46602277_46602417_46605012
transcript_134397.known	chr21	+	2354	12	FSM	ENSG00000160310.19	ENST00000355680.8	2354	12	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_11	196.111454227791	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGGTGCAGTGGCTTAC	46627855	True	NA	NA	False	ATTAAA	-16	NA	46635673	46665124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46635764_46636438_46636548_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744_46658921_46660832_46660963_46661799_46661937_46663382_46663555_46664294
transcript_134400.known	chr21	+	2131	11	FSM	ENSG00000160310.19	ENST00000397638.6	2131	11	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_10	193.920499174275	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTATCCTGTTTTATGC	46627796	True	NA	24	True	AATAAA	-24	NA	46635614	46664951	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744_46658921_46660832_46660963_46661799_46661937_46663382_46663555_46664294
transcript_134408.known	chr21	+	1932	9	FSM	ENSG00000160310.19	ENST00000440086.5	1932	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	244.17450214959	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGGTGCAGTGGCTTAC	46627862	True	NA	NA	False	ATTAAA	-16	NA	46635680	46665124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46661799_46661937_46663382_46663555_46664294
transcript_134412.nic	chr21	+	2755	8	ISM	ENSG00000160310.19	ENST00000355680.8	2354	12	-448	4982	-369	712	5prime_fragment	FALSE	canonical	3	263	junction_1	184.183803493651	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCAGAAGTTACTGCTT	46635192	True	NA	37	True	ATTAAA	-19	NA	46635225	46660142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_46635764_46636438_46636548_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744
transcript_134418.nic	chr21	+	1105	7	ISM	ENSG00000160310.19	ENST00000355680.8	2354	12	-47	15236	12	0	5prime_fragment	FALSE	canonical	3	263	junction_1	188.620135604753	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGCTCAGTGTCTTGAA	46627808	True	NA	NA	False	NA	NA	NA	46635626	46649888	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_46635764_46636438_46636548_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574
transcript_134425.nic	chr21	+	2263	7	ISM	ENSG00000160310.19	ENST00000397638.6	2131	11	-6	4809	-6	712	5prime_fragment	FALSE	canonical	3	357	junction_6	128.025605077873	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCAGAAGTTACTGCTT	46627790	True	NA	37	True	ATTAAA	-19	NA	46635608	46660142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744
transcript_134427.known	chr21	+	1011	7	FSM	ENSG00000160310.19	ENST00000291705.11	1011	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_6	234.908315448106	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCAGGGTCCTTCACAGAC	46627823	True	NA	NA	False	NA	NA	NA	46635641	46664473	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46664294
transcript_134430.known	chr21	+	954	6	FSM	ENSG00000160310.19	ENST00000397628.5	954	6	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_1	93.3372380135603	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGTGTCTTGAATTTTC	46627855	True	NA	NA	False	NA	NA	NA	46635673	46649893	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574
transcript_134431.known	chr21	+	2880	11	FSM	ENSG00000160310.19	ENST00000397637.5	2880	11	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_10	200.41566805018	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTATCCTGTTTTATGC	46627831	True	NA	24	True	AATAAA	-24	NA	46635649	46664951	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr21_+_46636548_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744_46658921_46660832_46660963_46661799_46661937_46663382_46663555_46664294
transcript_134432.known	chr22	+	8566	13	FSM	ENSG00000177663.14	ENST00000319363.11	8566	13	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_10	16.337371949681	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTTGTTCTTCTTATTC	17083627	True	NA	4	True	AATAAA	-17	NA	17084999	17115693	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_17085230_17097061_17097087_17097796_17097944_17098774_17098888_17100354_17100482_17101995_17102044_17102138_17102303_17103493_17103578_17104725_17104811_17105590_17105603_17105852_17105955_17107726_17107769_17108306
transcript_134437.known	chr22	+	8506	12	FSM	ENSG00000177663.14	ENST00000612619.1	8506	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_10	16.6857191376487	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTGTTCTTCTTATTCA	17083586	True	NA	5	True	AATAAA	-18	NA	17084958	17115694	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_17085230_17097061_17097087_17097796_17097944_17098774_17098888_17100354_17100482_17101995_17102044_17102138_17102303_17103493_17103578_17104725_17104811_17105590_17105603_17107726_17107769_17108306
transcript_134445.known	chr22	-	3961	2	FSM	ENSG00000183307.4	ENST00000399875.1	3961	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAAGCTTCCTGTGTGGTT	-17120725	True	NA	-6	True	AATAAA	-40	NA	17121367	17116298	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_17120144_17121251
transcript_134477.nic	chr22	-	2487	8	NIC	ENSG00000069998.12	novel	1799	8	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_7	419.31640189475	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTTGTGAAGCTCTGTC	-17159277	False	NA	-12	True	AATAAA	-28	NA	17159298	17137521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_17138358_17138549_17138739_17141058_17141234_17143097_17143132_17145023_17145118_17148447_17148561_17149541_17149746_17158456
transcript_134478.known	chr22	-	1799	8	FSM	ENSG00000069998.12	ENST00000336737.8	1799	8	0	0	0	0	multi-exon	FALSE	canonical	3	841	junction_7	195.592141238562	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGTGAAGCTCTGTCTG	-17147914	True	NA	-10	True	AATAAA	-30	NA	17159277	17137519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_17138358_17138549_17138739_17141058_17141234_17143097_17143132_17145023_17145118_17148447_17148561_17149541_17149746_17159125
transcript_134492.nnic	chr22	-	2460	8	NNC	ENSG00000069998.12	novel	1799	8	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	canonical	3	143	junction_4	408.791499172767	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTTGTGAAGCTCTGTC	-17159296	True	NA	-12	True	AATAAA	-28	NA	17159317	17137521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_17138358_17138549_17138739_17141058_17141234_17143097_17143755_17145023_17145118_17148447_17148561_17149541_17149746_17159125
transcript_134511.nnic	chr22	-	1614	7	NIC	ENSG00000069998.12	novel	1799	8	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	3	399	junction_6	340.378057786077	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTTGTGAAGCTCTGTC	-17159277	False	NA	-12	True	AATAAA	-28	NA	17159298	17137521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_17138358_17138549_17138739_17141058_17141234_17143097_17143132_17145023_17145118_17148447_17148561_17159125
transcript_134550.known	chr22	+	339	2	FSM	ENSG00000185837.4	ENST00000329743.4	379	2	32	8	27	-8	multi-exon	FALSE	canonical	2	12	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCATATGTCCCTTGTCT	17159207	True	NA	2	True	AATAAA	-14	NA	17159383	17165439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_17159552_17165268
transcript_134551.known	chr22	+	616	2	FSM	ENSG00000185837.4	ENST00000431923.2	660	2	42	2	42	-2	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTCCCTTGTCTCTTTTT	17159222	True	NA	8	True	AATAAA	-20	NA	17159398	17165445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_17159838_17165268
transcript_134553.known	chr22	-	3195	7	FSM	ENSG00000093072.18	ENST00000330232.8	3195	7	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_6	6.52346193026031	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGCTGTCACTGTGTC	-17199750	False	NA	-4	True	AATAAA	-13	NA	17199783	17179305	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_17181577_17181819_17182023_17182603_17182762_17188338_17188448_17189941_17190033_17191682_17191811_17199548
transcript_134554.known	chr22	-	2901	6	FSM	ENSG00000093072.18	ENST00000648061.1	2901	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	33.8384396803399	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACAATGCATTGAATGAG	-17198389	True	NA	-20	True	NA	NA	NA	17199596	17179321	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_17181577_17181819_17182023_17182603_17182762_17188338_17188448_17191682_17191811_17199548
transcript_134563.known	chr22	-	1333	9	FSM	ENSG00000131100.13	ENST00000253413.10	1333	9	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_1	30.5509308368829	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGGTTTTGACAGAGTCA	-17622583	True	NA	1	True	NA	NA	NA	17628749	17592135	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_17592737_17594528_17594617_17598193_17598289_17600026_17600096_17601091_17601182_17612811_17612879_17613210_17613321_17619460_17619527_17628602
transcript_134564.known	chr22	-	994	8	FSM	ENSG00000131100.13	ENST00000399798.6	994	8	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_7	147.116502494188	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGTGGTTGCATGGGCT	-17622583	True	NA	42	True	NA	NA	NA	17628749	17592408	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_17592737_17594528_17594617_17598193_17598289_17600026_17600096_17601091_17601182_17612811_17612879_17613210_17613321_17628602
transcript_134565.known	chr22	-	558	3	FSM	ENSG00000131100.13	ENST00000460085.1	558	3	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_2	8	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCAAGGGAGGAGGATTG	-17622583	True	NA	NA	False	NA	NA	NA	17628749	17612975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_17613321_17619460_17619527_17628602
transcript_134566.known	chr22	-	1208	8	FSM	ENSG00000131100.13	ENST00000399796.6	1208	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	148.379271339582	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTGATTTCTAGTGT	-17622581	True	NA	31	True	ATTAAA	-14	NA	17628747	17592168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_17592737_17594528_17594617_17598193_17598289_17600026_17600096_17612811_17612879_17613210_17613321_17619460_17619527_17628602
transcript_134567.known	chr22	+	4961	6	FSM	ENSG00000099968.18	ENST00000618481.4	4961	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	76.0878439699799	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATAATCTCTCAATTAT	17638479	False	NA	NA	False	NA	NA	NA	17638583	17730855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_17638887_17683213_17683322_17688985_17689143_17696140_17696211_17702242_17702387_17726676
transcript_134572.known	chr22	+	2662	6	FSM	ENSG00000099968.18	ENST00000498133.5	2662	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	95.4848679110989	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAGTAGGAAAAAG	17634840	True	NA	NA	False	AATAGA	-21	NA	17638740	17728699	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_17638887_17655661_17655833_17683213_17683322_17696140_17696211_17702242_17702387_17726676
transcript_134574.known	chr22	-	2495	6	FSM	ENSG00000015475.19	ENST00000317361.11	2495	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	170.168622254516	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCATGTTTTGGAGTGG	-17774005	False	3587	-6	True	AATAAA	-18	NA	17774016	17734137	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17743802_17744014_17750104_17750175_17773609
transcript_134575.known	chr22	-	2177	6	FSM	ENSG00000015475.19	ENST00000622694.5	2177	6	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_5	70.4630399571293	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCATGTTTTGGAGTGG	-17770882	True	NA	-6	True	AATAAA	-18	NA	17774469	17734137	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17743802_17744014_17750104_17750175_17774380
transcript_134582.known	chr22	-	700	6	FSM	ENSG00000015475.19	ENST00000551952.5	700	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	180.504404378397	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTCGATGTGGTCACAG	-17774654	False	NA	NA	False	NA	NA	NA	17774665	17735551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17743802_17744014_17750104_17750175_17774639
transcript_134583.known	chr22	-	907	5	FSM	ENSG00000015475.19	ENST00000399767.6	907	5	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	174.52363736755	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAATGGCCTTCATAT	-17770908	True	NA	-25	True	AATATA	-27	NA	17774495	17735363	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17743802_17744014_17774380
transcript_134584.known	chr22	-	1988	5	FSM	ENSG00000015475.19	ENST00000614949.4	1988	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	195.501118922629	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGACTTTTCATGTTTTGGA	-17770908	True	NA	-10	True	AATAAA	-14	NA	17774495	17734141	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17750104_17750175_17774380
transcript_134590.known	chr22	-	1879	4	FSM	ENSG00000015475.19	ENST00000399765.5	1879	4	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	196.832133781273	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCACTGTTTGGAAATAAA	-17770902	True	NA	-43	True	AAAAAG	-23	NA	17774489	17734174	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17774380
transcript_134598.known	chr22	-	4328	5	FSM	ENSG00000093100.13	ENST00000476405.1	4328	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	2.8613807855649	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGTGTGTTTCTTAAGT	-17811484	False	NA	-21	True	AATAAA	-13	NA	17811497	17787651	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_17790917_17790997_17791072_17791201_17791302_17808843_17808938_17810702
transcript_134604.nnic	chr22	+	2542	7	NNC	ENSG00000215193.14	novel	18445	6	NA	NA	-3	2907	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	6.14862224856557	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGTATTCTTGGAAAAGAAA	18073223	True	NA	25	True	ATTAAA	-28	NA	18077986	18091026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_+_18078048_18078295_18078607_18079873_18080015_18083436_18083733_18085111_18085259_18087971_18088497_18089965
transcript_134613.nnic	chr22	+	2790	6	NNC	ENSG00000215193.14	novel	18626	5	NA	NA	-3	2907	intron_retention	FALSE	non_canonical	0	0	junction_5	6.46838465151849	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGTATTCTTGGAAAAGAAA	18073223	True	NA	25	True	ATTAAA	-28	NA	18077986	18091026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_+_18078607_18079873_18080015_18083436_18083733_18085111_18085259_18087971_18088497_18089965
transcript_134619.known	chr22	+	18445	6	FSM	ENSG00000215193.14	ENST00000329627.11	18445	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	1.93907194296653	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTTTGTTGTGAGGAATA	18077889	True	NA	2	True	AATAAA	-13	NA	18077922	18105396	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_18078048_18078295_18078607_18079873_18080015_18083436_18083733_18085111_18085259_18087971
transcript_134631.known	chr22	+	18626	5	FSM	ENSG00000215193.14	ENST00000399744.8	18626	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	2.06155281280883	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTTTGTTGTGAGGAATA	18073226	True	NA	2	True	AATAAA	-13	NA	18077989	18105396	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_18078607_18079873_18080015_18083436_18083733_18085111_18085259_18087971
transcript_134639.known	chr22	+	2003	5	FSM	ENSG00000183785.16	ENST00000330423.8	2003	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1.6393596310755	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGTGTCAAGTGAGAGAA	18110727	True	NA	NA	False	AATAAA	-19	NA	18110808	18131732	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_18110869_18121478_18121702_18124155_18124305_18126353_18127035_18130842
transcript_134644.known	chr22	-	1699	1	FSM	ENSG00000225335.3	ENST00000607927.1	1699	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTCTCTTTTGTTCA	NA	False	NA	NA	False	TATAAA	-16	NA	18078884	18077185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_18077200_18078900
transcript_134645.known	chr22	+	1518	5	FSM	ENSG00000183785.16	ENST00000316027.10	1518	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.34477204006491	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTCTCTTTATTTATG	18110605	True	NA	16	True	AATATA	-14	NA	18110686	18131154	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_18110840_18121478_18121702_18124155_18124305_18126353_18127035_18130842
transcript_134647.known	chr22	+	1858	11	FSM	ENSG00000184979.10	ENST00000215794.8	1858	11	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_1	16.0872620417522	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTTGCAGTTTTAACGG	18150150	False	NA	NA	False	AATAAA	-17	NA	18150169	18177397	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_18150223_18157557_18157821_18160171_18160269_18161789_18161936_18167254_18167335_18167889_18168037_18169843_18169940_18170752_18170921_18173149_18173282_18173792_18173843_18176771
transcript_134655.known	chr22	-	2203	14	FSM	ENSG00000100033.17	ENST00000357068.11	2203	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	137.140794926732	1213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGAGCCCTTTGCCCTC	-18936269	True	NA	NA	False	AATAAA	-15	NA	18936293	18912780	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_18913363_18913437_18913527_18916889_18916989_18918315_18918492_18919450_18919598_18919705_18919799_18921341_18921424_18922324_18922405_18922816_18922934_18923114_18923180_18925050_18925201_18925687_18925723_18930989_18931199_18936014
transcript_134657.known	chr22	+	1117	5	FSM	ENSG00000183628.14	ENST00000331444.12	1117	5	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_2	30.6675724503913	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTTGTGTGATAGCTG	NA	False	NA	NA	False	AATAAA	-22	NA	18906319	18912088	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_18906485_18906564_18906726_18910171_18910273_18910887_18911029_18911539
transcript_134662.nnic	chr22	+	1456	3	NNC	ENSG00000284294.1	novel	1382	4	NA	NA	10	16	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_2	3	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTGTCTCTGTGTCTTT	18939443	False	NA	16	True	NA	NA	NA	18939455	18947757	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_+_18939750_18945105_18945301_18946790
transcript_134663.nnic	chr22	+	1327	3	NNC	ENSG00000284294.1	novel	1382	4	NA	NA	40	17	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	9.5	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGTCTCTGTGTCTTTT	18939473	False	NA	17	True	NA	NA	NA	18939485	18947758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_+_18939750_18945071_18945167_18946790
transcript_134665.nic	chr22	+	1215	2	ISM	ENSG00000284294.1	ENST00000640084.1	1382	4	3075	0	40	0	3prime_fragment	FALSE	canonical	3	36	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTCTTTCTCTATACT	18939473	False	NA	0	True	NA	NA	NA	18939485	18947741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_18939750_18946790
transcript_134667.known	chr22	+	812	4	FSM	ENSG00000183628.14	ENST00000436645.1	812	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	65.0999231950392	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCCCGCATGTGGCTTGT	18908072	False	NA	NA	False	AATAAA	-12	NA	18908662	18912078	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_18908694_18910171_18910273_18910887_18911029_18911539
transcript_134668.known	chr22	-	2034	14	FSM	ENSG00000100033.17	ENST00000420436.5	2034	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	158.635714581643	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGAGCCCTTTGCCCTC	-18936272	True	NA	NA	False	AATAAA	-15	NA	18936296	18912780	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_18913363_18913437_18913527_18916889_18916989_18918315_18918492_18919450_18919598_18919705_18919799_18921341_18921424_18922324_18922405_18922816_18922934_18923114_18923180_18925050_18925201_18925687_18925723_18930989_18931182_18936169
transcript_134669.known	chr22	+	1435	5	FSM	ENSG00000183628.14	ENST00000480608.5	1435	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	56.4596094566727	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGCTTGTGTGATAGCT	18905764	True	NA	NA	False	AATAAA	-21	NA	18906354	18912087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_18906485_18906564_18907087_18910178_18910273_18910887_18911029_18911539
transcript_134670.known	chr22	+	3245	5	FSM	ENSG00000183628.14	ENST00000483718.5	3245	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	53.0913128487138	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATCTTTTTCCTTTAAC	18905734	True	NA	NA	False	ATTAAA	-18	NA	18906324	18914238	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_18906468_18906564_18906726_18910171_18910273_18910887_18911029_18911539
transcript_134671.known	chr22	-	3106	13	FSM	ENSG00000100033.17	ENST00000491604.5	3106	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	136.43028337661	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGAGCCCTTTGCCCTC	-18936271	True	NA	NA	False	AATAAA	-15	NA	18936295	18912780	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_18913363_18913437_18913527_18916889_18916989_18918315_18918492_18919450_18919598_18919705_18919799_18921341_18922405_18922816_18922934_18923114_18923180_18925050_18925201_18925687_18925723_18930989_18931199_18936014
transcript_134672.nic	chr22	+	3481	5	NIC	ENSG00000273032.3	novel	3581	6	NA	NA	-3	0	intron_retention	FALSE	canonical	3	7	junction_3	4.43705983732471	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCAGGATTGGCCAGAGT	18970363	False	NA	4	True	ATTAAA	-8	NA	18970435	18994620	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_18970659_18987756_18987901_18988090_18988196_18990719_18990925_18991816
transcript_134674.nic	chr22	+	3213	3	ISM	ENSG00000273032.3	ENST00000675978.1	3828	6	-60	25588	16	0	5prime_fragment	FALSE	canonical	3	11	junction_1	4	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCAGGATTGGCCAGAGT	18970382	False	NA	4	True	ATTAAA	-8	NA	18970454	18994620	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_18970659_18990719_18990925_18991816
transcript_134678.known	chr22	-	4814	11	FSM	ENSG00000070413.20	ENST00000389262.8	4814	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	204.877133912011	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCATGGTTAGTCCTTGG	-19119048	True	NA	-6	True	AATAAA	-15	NA	19122407	19036285	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19039122_19041057_19041295_19041806_19041960_19048439_19048644_19056985_19057163_19060565_19060956_19063201_19063279_19064847_19065059_19068099_19068226_19089367_19089491_19122127
transcript_134679.known	chr22	-	4484	11	FSM	ENSG00000070413.20	ENST00000545799.5	4484	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	194.149839041911	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTTAGTCCTTGGTGTG	-19119095	True	NA	-2	True	AATAAA	-19	NA	19122454	19036281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19039122_19041057_19041295_19041806_19041960_19048439_19048644_19056985_19057163_19063201_19063279_19064847_19065059_19065184_19065190_19068095_19068226_19089367_19089491_19122127
transcript_134686.known	chr22	-	4438	10	FSM	ENSG00000070413.20	ENST00000263196.12	4438	10	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	154.24511517567	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCATGGTTAGTCCTTGG	-19119053	True	NA	-6	True	AATAAA	-15	NA	19122412	19036285	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19039122_19041057_19041295_19041806_19041960_19048439_19048644_19056985_19057163_19063201_19063279_19064847_19065068_19068099_19068226_19089367_19089491_19122127
transcript_134693.known	chr22	-	4361	9	FSM	ENSG00000070413.20	ENST00000537045.5	4361	9	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	197.294038176525	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTTAGTCCTTGGTGTG	-19119095	True	NA	-2	True	AATAAA	-19	NA	19122454	19036281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19039122_19041057_19041295_19041806_19041960_19048439_19048644_19056985_19057163_19063201_19063279_19064847_19065068_19068099_19068226_19122127
transcript_13470.known	chr1	+	4212	19	FSM	ENSG00000143382.16	ENST00000271643.9	4212	19	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	5.4794791137502	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGAGCTCTTCCTTGTC	150548853	True	NA	4	True	ATTAAA	-19	NA	150549407	150560933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150549500_150549821_150549896_150552204_150552309_150552542_150552601_150552897_150553254_150553425_150554123_150554364_150554468_150555428_150555566_150556161_150556367_150556620_150556794_150556938_150557051_150557149_150557336_150557493_150557624_150557944_150558150_150558472_150558650_150558961_150559166_150559286_150559467_150559760_150559906_150560059
transcript_134701.nic	chr22	-	3018	9	ISM	ENSG00000070413.20	ENST00000263196.12	4438	10	-49	3405	-7	-1854	5prime_fragment	FALSE	non_canonical	0	0	junction_6	163.57638697257	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAGTCGACTGCCTACCAC	-19119102	False	NA	NA	False	AATAAA	-17	NA	19122461	19039690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_-_19041295_19041806_19041960_19048439_19048644_19056985_19057163_19063201_19063279_19064847_19065068_19068099_19068226_19089367_19089491_19122127
transcript_134711.known	chr22	-	2101	10	FSM	ENSG00000100056.12	ENST00000472073.1	2101	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	43.0153575790591	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAACTGTCATTAAAGAACA	-19141719	True	NA	-35	True	NA	NA	NA	19144633	19133967	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19134476_19135059_19135176_19137322_19137433_19138214_19138318_19139158_19139293_19139611_19139730_19139854_19140025_19142537_19142634_19142725_19142895_19144056
transcript_134712.nic	chr22	-	2093	10	NIC	ENSG00000100056.12	novel	2101	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_9	44.2244555549958	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGGGGTTGCCTCTCCA	-19141747	True	NA	-4	True	ATTAAA	-17	NA	19144661	19133936	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_19134476_19135059_19135176_19137322_19137433_19138214_19138318_19139158_19139293_19139611_19139730_19139854_19140025_19142537_19142634_19142725_19142895_19144123
transcript_134713.known	chr22	-	5359	10	FSM	ENSG00000100056.12	ENST00000252137.11	5359	10	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_2	12.1655250605964	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTGCTTCTCGTTAT	-19141737	True	NA	-3	True	GATAAA	-16	NA	19144651	19130278	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19134476_19135059_19135176_19137322_19137433_19138214_19138318_19139158_19139293_19139611_19139730_19139854_19140025_19142537_19142634_19142725_19142895_19144505
transcript_13472.known	chr1	-	3950	3	FSM	ENSG00000143384.14	ENST00000369026.3	3950	3	0	0	0	0	multi-exon	FALSE	canonical	3	743	junction_2	27	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGGGTGTGATATGGGTC	-150573993	True	NA	NA	False	AATAAA	-14	NA	150579610	150574557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_150577492_150578243_150578492_150578842
transcript_134723.known	chr22	-	2625	3	FSM	ENSG00000063515.3	ENST00000086933.3	2625	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTAACTGCACCAGTCTG	NA	False	NA	-2	True	AATAAA	-25	NA	19150292	19146992	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19149096_19149662_19149917_19150024
transcript_134724.known	chr22	+	1445	1	FSM	ENSG00000260924.2	ENST00000565162.2	1445	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTCGACCAAGATAGTGT	NA	False	NA	28	True	AATAAA	-25	NA	19171394	19172839	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_19171400_19172800
transcript_134732.known	chr22	-	1514	9	FSM	ENSG00000100075.10	ENST00000451283.5	1514	9	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_8	744.236930940006	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTGTTGCAGCCTCCTG	-19178502	False	NA	-20	True	AATAAA	-4	NA	19178521	19175592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19176245_19176420_19176495_19176577_19176694_19176845_19176951_19177119_19177205_19177726_19177866_19177941_19178042_19178132_19178241_19178386
transcript_134733.known	chr22	-	1548	9	FSM	ENSG00000100075.10	ENST00000215882.10	1548	9	0	0	0	0	multi-exon	FALSE	canonical	3	1968	junction_8	187.358238076152	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGTCCTGTGTTCGT	-19167078	True	NA	-8	True	AATAAA	-16	NA	19178736	19175580	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19176245_19176420_19176495_19176577_19176694_19176845_19176951_19177119_19177205_19177726_19177866_19177941_19178042_19178132_19178241_19178579
transcript_134735.nnic	chr22	-	1692	9	NNC	ENSG00000100075.10	novel	1548	9	NA	NA	-98	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	817.763785805534	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGTCCTGTGTTCGT	NA	False	NA	-8	True	AATAAA	-16	NA	19178837	19175580	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_19176245_19176420_19176495_19176577_19176694_19176845_19176951_19177119_19177205_19177726_19177866_19177941_19178042_19178132_19178284_19178579
transcript_13474.known	chr1	-	1110	2	FSM	ENSG00000143384.14	ENST00000307940.3	1110	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGTTGAGAACAGGAAAG	-150579519	False	NA	NA	False	NA	NA	NA	150579530	150577069	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_150577492_150578842
transcript_134745.known	chr22	-	1598	8	FSM	ENSG00000100075.10	ENST00000470922.5	1598	8	0	0	0	0	multi-exon	FALSE	canonical	3	1968	junction_7	197.030402709421	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGGCAGAATAAACCGGAT	-19167081	True	NA	-37	True	NA	NA	NA	19178739	19175609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19176245_19176420_19176495_19176577_19176694_19176845_19176951_19177119_19177205_19177726_19178042_19178132_19178241_19178579
transcript_13475.known	chr1	-	4524	2	FSM	ENSG00000143384.14	ENST00000676522.1	4524	2	0	0	0	0	multi-exon	FALSE	canonical	3	743	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGGGGTGAACACCTTG	-150579583	False	NA	NA	False	AAAACA	-30	NA	150579594	150574719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_150578492_150578842
transcript_13476.known	chr1	+	1826	3	FSM	ENSG00000143382.16	ENST00000483335.1	1826	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	10.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTTGTGTGTGCCTGAG	150548866	True	NA	NA	False	NA	NA	NA	150549420	150551906	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150549500_150549821_150550277_150550614
transcript_134785.known	chr22	+	744	4	FSM	ENSG00000185608.9	ENST00000333130.4	744	4	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_1	20.237478982214	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCCTTTGTCTTGTGTTA	19429329	True	NA	31	True	AATAAA	-18	NA	19432544	19436075	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_19432608_19433264_19433349_19434735_19434895_19435637
transcript_134786.nnic	chr22	+	1011	4	NNC	ENSG00000185608.9	novel	942	3	NA	NA	-753	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	174.103417542563	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCCTTTGTCTTGTGTTA	19431735	False	NA	31	True	AATAAA	-18	NA	19431791	19436075	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_+_19432122_19433264_19433349_19434735_19434895_19435637
transcript_134787.known	chr22	+	954	4	FSM	ENSG00000185608.9	ENST00000443660.5	954	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	179.755389348971	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAAAATGCTCCTTTGTC	19429363	True	NA	23	True	AATAAA	-10	NA	19432578	19436067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_19432860_19433264_19433349_19434735_19434895_19435637
transcript_134788.nnic	chr22	-	1411	4	NNC	ENSG00000242259.9	novel	3720	3	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_1	180.844316102737	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCGGCCATGACCTACCA	-19441401	True	NA	NA	False	AATAAA	-15	NA	19447719	19440885	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_19441695_19444011_19444391_19447377_19447546_19447664
transcript_13479.known	chr1	-	725	5	FSM	ENSG00000143420.19	ENST00000361631.9	725	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	334.023951237033	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATGAATTAGGGCTTGGA	-150628996	False	38469	NA	False	NA	NA	NA	150629128	150622543	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_150622860_150625641_150625809_150626478_150626527_150627466_150627593_150629060
transcript_134790.known	chr22	-	1005	3	FSM	ENSG00000242259.9	ENST00000399568.5	1005	3	0	0	0	0	multi-exon	FALSE	canonical	3	492	junction_2	14.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCGGCCATGACCTACCA	-19441374	True	NA	NA	False	AATAAA	-15	NA	19447692	19440885	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19441695_19447377_19447546_19447664
transcript_134791.known	chr22	-	3720	3	FSM	ENSG00000242259.9	ENST00000399562.9	3720	3	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	167	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCGGCCATGACCTACCA	-19441393	True	NA	NA	False	AATAAA	-15	NA	19447711	19440885	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19444391_19447377_19447546_19447664
transcript_13480.known	chr1	-	633	5	FSM	ENSG00000143420.19	ENST00000339643.9	633	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	550.55489054226	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTGGGCTGGAGAGGCA	-150591107	True	NA	NA	False	NA	NA	NA	150629576	150622730	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_150622860_150625641_150625809_150626478_150626527_150627466_150627593_150629413
transcript_134802.nic	chr22	-	1929	2	ISM	ENSG00000242259.9	ENST00000399562.9	3720	3	-10	4788	-10	-4788	5prime_fragment	FALSE	canonical	3	492	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATGGCCAGGTGTCAGG	-19441403	True	NA	NA	False	AAAAAG	-7	NA	19447721	19445673	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_-_19447546_19447664
transcript_134804.known	chr22	-	1007	12	FSM	ENSG00000070010.19	ENST00000399523.5	1007	12	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	276.077004469214	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGCTTTTAGTTACTGG	-19466171	True	NA	-5	True	AATAAA	-17	NA	19479172	19450620	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19450745_19454801_19454831_19455679_19455769_19456586_19456635_19456852_19456919_19458070_19458140_19465201_19465275_19467872_19468004_19471686_19471809_19475067_19475101_19475469_19475603_19479082
transcript_134806.known	chr22	-	1791	12	FSM	ENSG00000070010.19	ENST00000263202.15	1791	12	0	0	0	0	multi-exon	FALSE	canonical	3	841	junction_10	103.828370778475	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCCTGTATTTTTTAT	-19466192	True	NA	-18	True	ATTAAA	-14	NA	19479193	19449910	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19450745_19454748_19454831_19455679_19455769_19456586_19456635_19456852_19456919_19458070_19458140_19465201_19465275_19467872_19468004_19471686_19471809_19475067_19475101_19475469_19475603_19479082
transcript_134807.nic	chr22	-	1059	12	NIC	ENSG00000070010.19	novel	1791	12	NA	NA	3	2	combination_of_known_junctions	FALSE	canonical	3	99	junction_10	278.518572165883	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTGGCTTTTAGTTACT	-19466198	True	NA	-7	True	AATAAA	-15	NA	19479199	19450622	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_19450745_19454748_19454831_19455679_19455769_19456586_19456635_19456852_19456919_19458070_19458140_19465201_19465275_19467872_19468004_19471686_19471809_19475067_19475101_19475495_19475603_19479082
transcript_134813.nic	chr22	-	944	10	NIC	ENSG00000070010.19	novel	1791	12	NA	NA	-22	2	combination_of_known_junctions	FALSE	canonical	3	49	junction_9	322.149187125208	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTGGCTTTTAGTTACT	-19466223	True	NA	-7	True	AATAAA	-15	NA	19479224	19450622	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_19450745_19454748_19454831_19455679_19455769_19456586_19456635_19456852_19456919_19458070_19458140_19465201_19465275_19467872_19468004_19471686_19471809_19479082
transcript_134814.nic	chr22	-	807	9	NIC	ENSG00000070010.19	novel	1791	12	NA	NA	-7	2	combination_of_known_junctions	FALSE	canonical	3	61	junction_8	337.789042895118	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTGGCTTTTAGTTACT	-19466208	True	NA	-7	True	AATAAA	-15	NA	19479209	19450622	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_19450745_19454748_19454831_19455679_19455769_19456586_19456635_19456852_19456919_19458070_19458140_19465201_19465275_19467872_19468004_19479082
transcript_134815.known	chr22	-	994	5	FSM	ENSG00000070010.19	ENST00000489406.1	994	5	0	0	0	0	multi-exon	FALSE	canonical	3	841	junction_3	33.7749907475931	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAAAGGTATCAGGTTCT	-19466186	True	NA	NA	False	NA	NA	NA	19479187	19467402	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19468004_19471686_19471809_19475067_19475101_19475469_19475603_19479082
transcript_134817.known	chr22	+	2097	2	FSM	ENSG00000185065.6	ENST00000431090.1	2097	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGTTCTTCTGAGTGGTG	19447857	False	NA	NA	False	AATAAA	-19	NA	19447892	19450105	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_19448326_19448441
transcript_134819.known	chr22	-	5038	11	FSM	ENSG00000070010.19	ENST00000459854.5	5038	11	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_9	285.9031479365	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGCTTTTAGTTACTGG	-19466171	True	NA	-5	True	AATAAA	-17	NA	19479172	19450620	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19454831_19455679_19455769_19456586_19456635_19456852_19456919_19458070_19458140_19465201_19465275_19467872_19468004_19471686_19471809_19475067_19475101_19475495_19475603_19479082
transcript_134820.known	chr22	+	1879	19	FSM	ENSG00000093009.11	ENST00000263201.7	1879	19	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_12	18.4176512222164	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATTGTGGCTCTGGTCTC	19474885	True	NA	21	True	AATAAA	-22	NA	19479919	19520608	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_19480020_19480157_19480218_19480952_19481046_19482689_19482828_19483861_19484006_19494326_19494383_19495980_19496030_19497385_19497448_19499100_19499152_19505361_19505482_19507385_19507518_19507765_19507865_19508529_19508692_19514748_19514888_19514964_19515049_19516526_19516646_19516816_19516894_19518843_19518910_19520480
transcript_134821.known	chr22	+	1693	18	FSM	ENSG00000093009.11	ENST00000404724.7	1693	18	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	45.838893444859	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATAAAATGCTTATTTT	19474903	True	NA	-9	True	NA	NA	NA	19479937	19520578	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_19480020_19480157_19480218_19480952_19481046_19483861_19484006_19494326_19494383_19495980_19496030_19497385_19497448_19499100_19499152_19505361_19505482_19507385_19507518_19507765_19507865_19508529_19508692_19514748_19514888_19514964_19515049_19516526_19516646_19516816_19516894_19518843_19518910_19520480
transcript_134822.known	chr22	-	1384	1	FSM	ENSG00000184113.10	ENST00000618236.2	1384	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCACCTGTGTCCTGTTCT	-19524352	True	NA	-2	True	AGTAAA	-15	NA	19524410	19523026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19523000_19524400
transcript_134825.known	chr22	+	1974	12	FSM	ENSG00000184702.20	ENST00000406395.5	1974	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	49.3997022107664	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCGTCCTGTCCTGGTGA	19713982	True	NA	-34	True	NA	NA	NA	19714503	19723274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_19714632_19714780_19714792_19719601_19719699_19719805_19719893_19720114_19720239_19720319_19720455_19720548_19720667_19720767_19720870_19721639_19721737_19721832_19721958_19722236_19722340_19722427
transcript_134826.known	chr22	+	4113	12	FSM	ENSG00000284874.1	ENST00000455843.5	4113	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_11	39.8826791875064	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGCCGCCTGCTGCCCTAT	19716698	False	NA	NA	False	NA	NA	NA	19717219	19724216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_19718819_19719601_19719699_19719805_19719893_19720114_19720239_19720319_19720455_19720548_19720667_19720767_19720870_19721639_19721737_19721821_19721958_19722236_19722340_19722427_19723580_19723853
transcript_134830.known	chr22	+	2241	11	FSM	ENSG00000184702.20	ENST00000438754.6	2241	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	42.0029760850347	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCGGGTGTCCGAGTGCT	19718174	True	NA	11	True	NA	NA	NA	19718457	19723319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_19718819_19719601_19719699_19719805_19719893_19720114_19720239_19720319_19720455_19720548_19720667_19720767_19720870_19721639_19721737_19721832_19721958_19722236_19722340_19722427
transcript_134837.known	chr22	+	959	2	FSM	ENSG00000203618.6	ENST00000366425.4	959	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTCTGCACGACTGACC	19723500	True	NA	3	True	AATAAA	-15	NA	19723538	19724771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_19723580_19723853
transcript_134843.nic	chr22	-	1624	8	NIC	ENSG00000185838.14	novel	1699	7	NA	NA	-14	0	combination_of_known_splicesites	TRUE	canonical	3	48	junction_7	48.5588218933848	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGGCTTGAGGTGGGA	-19851275	True	NA	-9	True	AATAAA	-14	NA	19854888	19788414	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19820597_19820724_19821227_19821376_19854442_19854540_19854659
transcript_134844.nic	chr22	-	1563	8	NIC	ENSG00000185838.14	novel	1699	7	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_7	58.3703866769471	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGGCTTGAGGTGGGA	-19851236	True	NA	-9	True	AATAAA	-14	NA	19854849	19788414	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19820597_19820724_19821227_19821376_19854442_19854540_19854681
transcript_134845.known	chr22	-	6642	8	FSM	ENSG00000185838.14	ENST00000329517.11	6642	8	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_5	31.1113864581272	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCATAACAGCCATTCTG	-19851261	True	NA	NA	False	AATAAA	-15	NA	19854874	19783222	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19820597_19820724_19821227_19821376_19854442_19854540_19854819
transcript_134847.nic	chr22	-	1408	7	NIC	ENSG00000185838.14	novel	6642	8	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	60.0872051457065	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGGCTTGAGGTGGGA	NA	False	NA	-9	True	AATAAA	-14	NA	19854958	19788414	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19821227_19821376_19854442_19854540_19854819
transcript_13485.known	chr1	-	792	4	FSM	ENSG00000143420.19	ENST00000361532.9	792	4	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_3	376.759280649536	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAAAGGGGTTCTAGTT	-150629008	False	NA	NA	False	NA	NA	NA	150629140	150622440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_150622860_150625641_150625809_150627466_150627593_150629060
transcript_134851.nic	chr22	-	1350	6	NIC	ENSG00000185838.14	novel	1197	6	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	40	junction_4	68.3473481563111	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGGCTTGAGGTGGGA	-19851275	True	NA	-9	True	AATAAA	-14	NA	19854888	19788414	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19854442_19854540_19854659
transcript_134852.nic	chr22	-	1213	6	NIC	ENSG00000185838.14	novel	6642	8	NA	NA	28	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_4	57.8909319323847	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGGCTTGAGGTGGGA	-19851298	True	NA	-9	True	AATAAA	-14	NA	19854911	19788414	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19854442_19854540_19854819
transcript_134858.nnic	chr22	-	1042	5	NIC	ENSG00000185838.14	novel	6642	8	NA	NA	-29	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_3	75.7495874576225	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGGCTTGAGGTGGGA	-19851290	True	NA	-9	True	AATAAA	-14	NA	19854903	19788414	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_19788961_19802000_19802217_19806658_19806758_19854442_19854540_19854819
transcript_13486.known	chr1	-	360	4	FSM	ENSG00000143420.19	ENST00000638926.1	360	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	546.203258869809	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCCCGGGGCTCTGCCA	-150629338	False	NA	NA	False	NA	NA	NA	150629470	150622843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_150622860_150625641_150625803_150627466_150627593_150629413
transcript_134862.known	chr22	-	6653	3	FSM	ENSG00000215012.9	ENST00000328554.9	6653	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	9	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGAGTTTGGGGCTTG	-19851261	True	NA	-7	True	AATAAA	-16	NA	19854874	19846145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19852487_19854442_19854540_19854659
transcript_134863.known	chr22	-	6523	3	FSM	ENSG00000215012.9	ENST00000407472.5	6523	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	57	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGGGCTTGTGTTTTCC	-19851283	True	NA	1	True	AATAAA	-24	NA	19854896	19846137	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19852487_19854442_19854540_19854819
transcript_134866.known	chr22	-	730	3	FSM	ENSG00000215012.9	ENST00000416337.1	730	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	26	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGGTGGACTTCTGCTG	-19851203	True	NA	NA	False	NA	NA	NA	19854816	19851988	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19852487_19854442_19854540_19854681
transcript_134868.known	chr22	-	6785	2	FSM	ENSG00000215012.9	ENST00000405640.1	6785	2	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGAGTTTGGGGCTTG	-19851273	True	NA	-7	True	AATAAA	-16	NA	19854886	19846145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19852487_19854442
transcript_134871.known	chr22	-	1699	7	FSM	ENSG00000185838.14	ENST00000403325.5	1699	7	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_5	32.4602320796797	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGGCTTGAGGTGGGA	-19851230	True	NA	-9	True	AATAAA	-14	NA	19854843	19788414	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19820597_19820724_19821227_19821376_19854442
transcript_134872.known	chr22	-	1197	6	FSM	ENSG00000185838.14	ENST00000460402.5	1197	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	76.9051363694259	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTGTTGCCAGCTGAG	-19851193	True	NA	-58	True	NA	NA	NA	19854806	19788463	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19854442_19854540_19854681
transcript_134873.known	chr22	-	1385	3	FSM	ENSG00000215012.9	ENST00000484072.5	1385	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	90	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGAGTTTGGGGCTTG	-19851250	True	NA	-7	True	AATAAA	-16	NA	19854863	19846145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19847390_19854442_19854540_19854819
transcript_134881.known	chr22	-	4056	20	FSM	ENSG00000099889.14	ENST00000263207.8	4056	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	80.4940079668018	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGCTTTCTGCCACTC	-20016055	True	NA	-31	True	ATTAAA	-13	NA	20016823	19969895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19970744_19971215_19971336_19971885_19971972_19972357_19972412_19972736_19972828_19972924_19973037_19973118_19973318_19973642_19973794_19974111_19974240_19975685_19975758_19976705_19976724_19977414_19977587_19977957_19978076_19978896_19979081_19979742_19980243_19981210_19981738_19981932_19982092_19990584_19990813_20010454_20010509_20016588
transcript_13489.known	chr1	-	1369	3	FSM	ENSG00000143420.19	ENST00000513281.5	1369	3	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_2	451	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGAACCTTATAGATATC	-150628984	False	38469	NA	False	AGTAAA	-29	NA	150629116	150624621	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_150625809_150627466_150627593_150629060
transcript_13490.known	chr1	-	2818	3	FSM	ENSG00000143420.19	ENST00000271690.12	2818	3	0	0	0	0	multi-exon	FALSE	canonical	3	1135	junction_1	94.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGTGTGTGGTCTGGTTC	-150591108	True	NA	-2	True	ATTAAA	-28	NA	150629577	150623280	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_150625809_150627466_150627593_150629413
transcript_134911.known	chr22	-	1941	18	FSM	ENSG00000184470.21	ENST00000400521.7	1941	18	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_13	29.1125961156877	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCTCTGCCTGCGGTGT	-19941251	True	NA	-5	True	AATAAA	-19	NA	19941818	19875521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19875808_19877039_19877235_19878089_19878188_19878365_19878438_19880178_19880272_19880621_19880718_19883324_19883462_19895406_19895582_19898038_19898131_19899048_19899069_19911376_19911448_19915213_19915277_19915764_19915844_19918142_19918218_19918859_19919005_19919542_19919600_19931029_19931099_19941700
transcript_134912.nic	chr22	-	1872	18	NIC	ENSG00000184470.21	novel	1941	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	30.1640267887218	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCTCTGCCTGCGGTGT	-19941251	True	NA	-5	True	AATAAA	-19	NA	19941818	19875521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_19875808_19877108_19877235_19878089_19878188_19878365_19878438_19880178_19880272_19880621_19880718_19883324_19883462_19895406_19895582_19898038_19898131_19899048_19899069_19911376_19911448_19915213_19915277_19915764_19915844_19918142_19918218_19918859_19919005_19919542_19919600_19931029_19931099_19941700
transcript_134917.nic	chr22	-	3684	18	NIC	ENSG00000099889.14	novel	4056	20	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	72.0926931206213	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGCTTTCTGCCACTC	-19985175	True	NA	-31	True	ATTAAA	-13	NA	19987217	19969895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_19970744_19971215_19971336_19971885_19971972_19972357_19972412_19972736_19972828_19972924_19973037_19973118_19973318_19973642_19973794_19974111_19974240_19975685_19975758_19976705_19976724_19977414_19977587_19977957_19978076_19978896_19979081_19979742_19980243_19981210_19981738_19981932_19982092_19987072
transcript_134927.nic	chr22	-	3589	18	NIC	ENSG00000099889.14	novel	4056	20	NA	NA	-27	-93	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	72.0926931206213	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACTGAGAAAAAGCATTAAA	-19985175	True	NA	-53	True	AAGAAA	-3	NA	19987217	19969990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_19970744_19971215_19971336_19971885_19971972_19972357_19972412_19972736_19972828_19972924_19973037_19973118_19973318_19973642_19973794_19974111_19974240_19975685_19975758_19976705_19976724_19977414_19977587_19977957_19978076_19978896_19979081_19979742_19980243_19981210_19981738_19981932_19982092_19987072
transcript_134930.known	chr22	-	3155	17	FSM	ENSG00000184470.21	ENST00000400519.6	3155	17	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_16	33.5283811680493	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCTCTGCCTGCGGTGT	-19941236	True	NA	-5	True	AATAAA	-19	NA	19941803	19875521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19877235_19878089_19878188_19878365_19878438_19880178_19880272_19880621_19880718_19883324_19883462_19895406_19895582_19898038_19898131_19899048_19899069_19911376_19911448_19915213_19915277_19915764_19915844_19918142_19918218_19918859_19919005_19919542_19919600_19931029_19931096_19941700
transcript_134936.nnic	chr22	-	3184	17	NIC	ENSG00000099889.14	novel	4056	20	NA	NA	-27	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	80.9212580228459	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGCTTTCTGCCACTC	-19985175	True	NA	-31	True	ATTAAA	-13	NA	19987217	19969895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_19970744_19971215_19971336_19971885_19971972_19972357_19972412_19972736_19972828_19972924_19973037_19973118_19973318_19973642_19973794_19974111_19974240_19975685_19975758_19976705_19976724_19977414_19977587_19977957_19978076_19978896_19979081_19981210_19981738_19981932_19982092_19987072
transcript_134942.nic	chr22	-	3666	17	NIC	ENSG00000099889.14	novel	4056	20	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	94	junction_14	44.4792349726252	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGCTTTCTGCCACTC	-19985175	True	NA	-31	True	ATTAAA	-13	NA	19987217	19969895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_19970744_19971215_19971336_19971885_19971972_19972357_19972412_19972736_19972828_19972924_19973037_19973118_19973318_19973642_19973794_19974111_19974240_19975685_19975758_19977414_19977587_19977957_19978076_19978896_19979081_19979742_19980243_19981210_19981738_19981932_19982092_19987072
transcript_134966.known	chr22	-	2682	16	FSM	ENSG00000099889.14	ENST00000406522.5	2682	16	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_13	45.3352940752444	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCATGCCTGGTACGTTC	-19985051	False	NA	NA	False	NA	NA	NA	19987093	19971227	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19971336_19971885_19971972_19972357_19972412_19972736_19972828_19972924_19973037_19973118_19973318_19973642_19973794_19974111_19974240_19975685_19975758_19977414_19977587_19977957_19978076_19978896_19979081_19979742_19980243_19981210_19981738_19981932_19982092_19987072
transcript_13497.known	chr1	-	703	2	FSM	ENSG00000143420.19	ENST00000362052.7	703	2	0	0	0	0	multi-exon	FALSE	canonical	3	1324	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGAATCAGTTTCTTCA	-150591108	True	NA	-21	True	AATAAA	-11	NA	150629577	150627053	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_150627593_150629413
transcript_134984.known	chr22	-	1893	12	FSM	ENSG00000184470.21	ENST00000334363.14	1893	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	16.510452486904	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCGGGCACTCACCCTTC	-19941237	True	NA	NA	False	ATTAAA	-15	NA	19941804	19894257	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19895201_19895406_19895582_19898038_19898131_19899048_19899069_19911376_19911448_19915213_19915277_19915764_19915844_19918142_19918218_19918859_19919005_19919542_19919600_19931029_19931099_19941700
transcript_134989.known	chr22	-	810	8	FSM	ENSG00000184470.21	ENST00000462843.2	810	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	54.2394539735324	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGACTGTCCACCTCACCC	-19881079	False	NA	NA	False	NA	NA	NA	19881154	19875691	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19875808_19877108_19877235_19878089_19878188_19878365_19878438_19880178_19880272_19880621_19880718_19880855_19880946_19881035
transcript_134991.known	chr22	-	1129	7	FSM	ENSG00000184470.21	ENST00000462330.5	1129	7	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_6	23.2999761564017	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCTCTGCCTGCGGTGT	-19881294	False	NA	-5	True	AATAAA	-19	NA	19881369	19875521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19875808_19877039_19877235_19878089_19878188_19878365_19878438_19880178_19880272_19880621_19880718_19881080
transcript_134993.nic	chr22	-	1090	7	NIC	ENSG00000184470.21	novel	1129	7	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	36.2050487578122	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCTCTGCCTGCGGTGT	NA	False	NA	-5	True	AATAAA	-19	NA	19881399	19875521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_19875808_19877108_19877235_19878089_19878188_19878365_19878438_19880178_19880272_19880621_19880718_19881080
transcript_134996.known	chr22	+	1548	6	FSM	ENSG00000093010.15	ENST00000403710.5	1548	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	125.811605188075	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCTTATATACTAATATC	19940452	True	NA	19	True	NA	NA	NA	19941772	19968958	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_19941898_19961198_19961290_19962232_19962816_19963565_19963760_19964167_19964300_19968535
transcript_134998.known	chr22	+	2272	6	FSM	ENSG00000093010.15	ENST00000361682.11	2272	6	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	97.3118697795906	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTTTCTCAGTGTTTTT	19940451	True	NA	NA	False	NA	NA	NA	19941771	19969975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_19941898_19961198_19961290_19962526_19962816_19963565_19963760_19964167_19964300_19968535
transcript_135.known	SIRV4002	+	3999	1	FSM	SIRV4002A	SIRV4002	3999	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	745	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	3999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV4002_+_0_4000
transcript_13500.known	chr1	-	973	6	FSM	ENSG00000143457.11	ENST00000427665.1	973	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	132.4289998452	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGGCAATGAATCGAGCC	-150691925	True	NA	NA	False	NA	NA	NA	150697144	150648436	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_150648749_150661813_150661929_150663631_150663764_150694107_150694174_150694655_150694851_150696991
transcript_135001.nic	chr22	-	2391	6	NIC	ENSG00000184470.21	novel	1129	7	NA	NA	-30	0	intron_retention	FALSE	canonical	3	63	junction_5	24.1826384003069	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCTCTGCCTGCGGTGT	NA	False	NA	-5	True	AATAAA	-19	NA	19881399	19875521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_19877235_19878089_19878188_19878365_19878438_19880178_19880272_19880621_19880718_19881080
transcript_135005.known	chr22	-	2700	5	FSM	ENSG00000184470.21	ENST00000495655.2	2700	5	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_2	3.3166247903554	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGTGCTCTGCCTGCGGT	-19881272	False	NA	-7	True	AATAAA	-17	NA	19881347	19875523	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_19877235_19878089_19878188_19878365_19878438_19880178_19880272_19880621
transcript_135009.nic	chr22	+	2200	9	NIC	ENSG00000183597.16	novel	2439	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	34	junction_1	19.7673974007708	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGAGGCCTTTCCCTTGT	20020158	True	NA	12	True	AATAAA	-24	NA	20021068	20065926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_20021135_20036759_20036855_20043354_20043444_20052464_20052585_20053436_20053552_20055942_20056014_20061529_20061684_20063337_20063443_20064541
transcript_135012.known	chr22	+	2439	9	FSM	ENSG00000183597.16	ENST00000456048.5	2439	9	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	18.9917745353087	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCGAGGCCTTTCCCTTG	20020158	True	NA	11	True	AATAAA	-23	NA	20021068	20065925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20021135_20036759_20037095_20043354_20043444_20052464_20052585_20053436_20053552_20055942_20056014_20061529_20061684_20063337_20063443_20064541
transcript_135015.known	chr22	+	3509	9	FSM	ENSG00000183597.16	ENST00000327374.9	3509	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	21.3116752039815	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCACCTTGGGAGGCTGAG	20020199	True	NA	NA	False	AAAAAG	-43	NA	20021109	20067164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20021247_20036759_20036855_20043354_20043444_20052464_20052585_20053436_20053552_20055942_20056014_20061529_20061684_20063337_20063443_20064541
transcript_135016.known	chr22	+	1920	9	FSM	ENSG00000183597.16	ENST00000401833.5	1920	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	20.3960780543711	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTCTTGCTCTGTCACCC	20020228	True	NA	NA	False	NA	NA	NA	20021138	20065364	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20021247_20036759_20037095_20043354_20043444_20052464_20052585_20053436_20053552_20055942_20056014_20061529_20061684_20063337_20063443_20064541
transcript_135018.nic	chr22	+	2046	8	NIC	ENSG00000183597.16	novel	2439	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	22	junction_6	23.0332501450598	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGAGGCCTTTCCCTTGT	20020158	True	NA	12	True	AATAAA	-24	NA	20021068	20065926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_20021135_20036759_20036855_20043354_20043444_20052464_20052585_20053436_20053552_20055942_20056014_20063337_20063443_20064541
transcript_135021.known	chr22	+	2084	8	FSM	ENSG00000183597.16	ENST00000432883.5	2084	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	22.2573079032942	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCGAGGCCTTTCCCTTG	20020158	True	NA	11	True	AATAAA	-23	NA	20021068	20065925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20021135_20036759_20036855_20043354_20043444_20052464_20052585_20055942_20056014_20061529_20061684_20063337_20063443_20064541
transcript_135024.known	chr22	+	2241	8	FSM	ENSG00000183597.16	ENST00000399807.7	2241	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	21.3570234110372	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGGAATCTGTACCTGA	20020178	True	NA	-52	True	NA	NA	NA	20021088	20065862	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20021135_20036759_20037095_20043354_20043444_20052464_20052585_20055942_20056014_20061529_20061684_20063337_20063443_20064541
transcript_13503.known	chr1	-	3124	5	FSM	ENSG00000143457.11	ENST00000271732.8	3124	5	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_2	17.1682847133894	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCTCTCTGTGCACAA	-150691935	True	NA	-7	True	AATAAA	-17	NA	150697154	150646229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_150648749_150661813_150661929_150663631_150663764_150694655_150694851_150696991
transcript_135031.known	chr22	+	570	7	FSM	ENSG00000183597.16	ENST00000450664.5	570	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	20.8539897594894	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCTTTGGGAAGCAGCT	20020191	True	NA	NA	False	NA	NA	NA	20021101	20061576	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20021135_20036759_20036855_20043354_20043444_20052464_20052585_20053436_20053552_20055942_20056014_20061529
transcript_135032.nic	chr22	+	1931	7	NIC	ENSG00000183597.16	novel	2084	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	22	junction_5	25.987176324744	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGAGGCCTTTCCCTTGT	20020158	True	NA	12	True	AATAAA	-24	NA	20021068	20065926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_20021135_20036759_20036855_20043354_20043444_20052464_20052585_20055942_20056014_20063337_20063443_20064541
transcript_135034.known	chr22	+	2011	7	FSM	ENSG00000183597.16	ENST00000398042.6	2011	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	26.6359197742864	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGAGGCCTTTCCCTTGT	20020161	True	NA	12	True	AATAAA	-24	NA	20021071	20065926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20021135_20036759_20036855_20043354_20043444_20052464_20052585_20061529_20061684_20063337_20063443_20064541
transcript_135037.nic	chr22	+	2171	7	NIC	ENSG00000183597.16	novel	2439	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	22	junction_5	24.9377001523575	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGAGGCCTTTCCCTTGT	20020158	True	NA	12	True	AATAAA	-24	NA	20021068	20065926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_20021135_20036759_20037095_20043354_20043444_20052464_20052585_20055942_20056014_20063337_20063443_20064541
transcript_135038.nic	chr22	+	2254	7	NIC	ENSG00000183597.16	novel	2439	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	13	junction_4	25.7536405193518	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGAGGCCTTTCCCTTGT	20020158	True	NA	12	True	AATAAA	-24	NA	20021068	20065926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_20021135_20036759_20037095_20043354_20043444_20052464_20052585_20061529_20061684_20063337_20063443_20064541
transcript_135043.known	chr22	+	2086	7	FSM	ENSG00000183597.16	ENST00000447208.6	2086	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	31.1434851400203	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCGAGGCCTTTCCCTTG	20020158	True	NA	11	True	AATAAA	-23	NA	20021068	20065925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20021247_20036759_20036855_20043354_20043444_20052464_20052585_20053436_20053552_20063337_20063443_20064541
transcript_135044.nic	chr22	+	2016	7	NIC	ENSG00000183597.16	novel	3509	9	NA	NA	-6	0	intron_retention	FALSE	canonical	3	22	junction_5	27.4934335594681	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGAGGCCTTTCCCTTGT	20020185	True	NA	12	True	AATAAA	-24	NA	20021095	20065926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_20021247_20036759_20036855_20043354_20043444_20052464_20052585_20055942_20056014_20063337_20063443_20064541
transcript_135049.known	chr22	+	568	6	FSM	ENSG00000183597.16	ENST00000411907.5	568	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	24.2289083534525	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGATGTGCTCAACAATG	20020158	True	NA	NA	False	NA	NA	NA	20021068	20061656	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20021135_20036759_20036855_20043354_20043444_20052464_20052585_20055942_20056014_20061529
transcript_135064.known	chr22	+	4506	14	FSM	ENSG00000128191.16	ENST00000351989.8	4506	14	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	21.5150972176289	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAATGGCTGATGTCTTTA	20077827	True	NA	11	True	CATAAA	-16	NA	20080240	20111872	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20080384_20085686_20086684_20087161_20087322_20089668_20089812_20089975_20090259_20091434_20091633_20091868_20091971_20092808_20092908_20094712_20094796_20106176_20106278_20106591_20106699_20107270_20107399_20108889_20109004_20110024
transcript_135068.known	chr22	+	4419	13	FSM	ENSG00000128191.16	ENST00000383024.6	4419	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	37.1202063871178	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCTGATGTCTTTATTC	20077818	True	NA	14	True	CATAAA	-19	NA	20080231	20111875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20080384_20085686_20086684_20087161_20087322_20089668_20089812_20089975_20090259_20091434_20091633_20091868_20091971_20094712_20094796_20106176_20106278_20106591_20106699_20107270_20107399_20108889_20109004_20110024
transcript_135069.known	chr22	-	2928	13	FSM	ENSG00000099899.15	ENST00000403707.7	2928	13	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_12	36.3672433501481	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGGACAGTTTGCTTT	NA	False	NA	-10	True	AATAAA	-15	NA	20117392	20111874	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_20112795_20112910_20113008_20113117_20113235_20113431_20113508_20113685_20113809_20114573_20114686_20114760_20114877_20114964_20115080_20115265_20115448_20115671_20115781_20116037_20116613_20116882_20116973_20117096
transcript_13507.nnic	chr1	+	1170	4	Antisense	novelGene_ENSG00000143457.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	41.0446910899164	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACATACATCCCTGGTGTA	150641563	True	NA	NA	False	AATAAA	-24	NA	150641682	150650026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr1_+_150641721_150642029_150642087_150642992_150643087_150649045
transcript_135082.known	chr22	-	2886	12	FSM	ENSG00000099899.15	ENST00000252136.12	2886	12	0	0	0	0	multi-exon	TRUE	canonical	3	169	junction_9	22.5406886458267	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGGACAGTTTGCTTT	-20115030	True	NA	-10	True	AATAAA	-15	NA	20117226	20111874	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_20112795_20112910_20113008_20113117_20113235_20113431_20113508_20113685_20113809_20114573_20114686_20114760_20114877_20114964_20115080_20115265_20115448_20115671_20115781_20116037_20116613_20116882
transcript_135086.known	chr22	-	2473	12	FSM	ENSG00000099899.15	ENST00000439169.2	2473	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	62.4899330735535	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGTGAGGGCCAGAATA	-20115026	True	NA	NA	False	NA	NA	NA	20117222	20112337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_20112795_20112910_20113008_20113117_20113235_20113431_20113562_20113685_20113809_20114573_20114686_20114760_20114877_20114964_20115080_20115265_20115448_20115671_20115781_20116037_20116613_20116882
transcript_13513.nnic	chr1	+	1244	4	Antisense	novelGene_ENSG00000143457.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	56	junction_3	26.3185612575358	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACATACATCCCTGGTGTA	150641563	True	NA	NA	False	AATAAA	-24	NA	150641682	150650026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr1_+_150641795_150642029_150642087_150642992_150643087_150649045
transcript_135167.known	chr22	+	1132	6	FSM	ENSG00000099901.17	ENST00000402752.5	1132	6	0	0	0	0	multi-exon	FALSE	canonical	3	3233	junction_5	1771.17741629685	1667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATGGCAGGACTGTGTG	20116974	True	NA	18	True	AATAAA	-21	NA	20117423	20127355	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20117665_20119012_20119150_20122263_20122422_20125307_20125437_20126302_20126369_20126954
transcript_135176.known	chr22	+	1221	6	FSM	ENSG00000099901.17	ENST00000430524.6	1221	6	0	0	0	0	multi-exon	FALSE	canonical	1	86	junction_1	2968.8534217775	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATGGCAGGACTGTGTG	20116091	False	NA	18	True	AATAAA	-21	NA	20116103	20127355	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20116431_20119012_20119150_20122263_20122422_20125307_20125437_20126302_20126369_20126951
transcript_135181.known	chr22	+	837	6	FSM	ENSG00000099901.17	ENST00000331821.7	837	6	0	0	0	0	multi-exon	FALSE	canonical	3	3733	junction_5	1588.07727771667	1182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCAGGTTGTTTTTTT	20040276	True	NA	21	True	TATAAA	-12	NA	20117547	20127181	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20117665_20119012_20119150_20122263_20122422_20125307_20125437_20126302_20126369_20126951
transcript_13519.nnic	chr1	+	1150	3	Antisense	novelGene_ENSG00000143457.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_2	29.5	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACATACATCCCTGGTGTA	150641563	True	NA	NA	False	AATAAA	-24	NA	150641682	150650026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr1_+_150641795_150642029_150642087_150649045
transcript_135190.known	chr22	+	932	6	FSM	ENSG00000099901.17	ENST00000418705.2	932	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3051.39027985605	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGGAGAAGCAATAAATC	20117935	False	NA	-8	True	NA	NA	NA	20117952	20127035	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20118314_20119012_20119150_20122263_20122422_20125307_20125437_20126302_20126369_20126954
transcript_135207.known	chr22	+	584	4	FSM	ENSG00000099901.17	ENST00000411892.5	584	4	0	0	0	0	multi-exon	FALSE	canonical	3	6911	junction_2	685.157402840155	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTGGCGGGTTATGTGCAA	20040285	True	NA	NA	False	GGGGCT	-14	NA	20117556	20125488	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20117665_20119012_20119150_20122263_20122422_20125307
transcript_135209.known	chr22	-	2498	12	FSM	ENSG00000099899.15	ENST00000404751.7	2498	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	64.8750865857159	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGTGTTTCTGTGATGA	-20115049	True	NA	NA	False	AATAAA	-13	NA	20117245	20112303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_20112817_20112910_20113008_20113117_20113235_20113431_20113508_20113685_20113809_20114573_20114686_20114760_20114877_20114964_20115080_20115265_20115448_20115671_20115781_20116037_20116613_20116882
transcript_13521.known	chr1	-	1629	8	FSM	ENSG00000143387.14	ENST00000271651.8	1629	8	0	0	0	0	multi-exon	TRUE	canonical	2	40	junction_5	10.7760126660835	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTTGGATACTGTGT	-150807720	True	NA	1	True	AATAAA	-21	NA	150808260	150796207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_150796899_150799167_150799274_150799543_150799710_150804020_150804240_150805860_150806017_150806101_150806225_150806685_150806807_150808213
transcript_135210.known	chr22	-	1944	2	FSM	ENSG00000040608.14	ENST00000043402.8	1944	2	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGCCTCTCAGGCTAG	-20268307	False	NA	-6	True	AATAAA	-16	NA	20268318	20241414	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_20243111_20268070
transcript_135212.known	chr22	-	1973	2	FSM	ENSG00000040608.14	ENST00000425986.1	1973	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGTGGCCTCTCAGGCT	-20243667	True	NA	-8	True	AATAAA	-14	NA	20243684	20241416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_20243111_20243405
transcript_135216.known	chr22	-	1172	5	FSM	ENSG00000128185.10	ENST00000248879.8	1172	5	0	0	0	0	multi-exon	FALSE	canonical	3	644	junction_2	60.1227910197123	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCCTGGTAGGGCCCCCA	-20309632	True	NA	NA	False	NA	NA	NA	20320060	20314237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_20314825_20315335_20315477_20316118_20316220_20319638_20319800_20319878
transcript_135220.known	chr22	-	935	4	FSM	ENSG00000128185.10	ENST00000443409.1	935	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	325.111604769125	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCGCTTGTTCTGGTCTCA	-20309652	True	NA	NA	False	NA	NA	NA	20320080	20314393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_20314825_20315335_20315477_20319638_20319800_20319878
transcript_135224.known	chr22	-	962	4	FSM	ENSG00000128185.10	ENST00000405465.3	962	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	360.078077952855	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAAATGTGGCTTGTGTG	-20309581	True	NA	NA	False	AATAAA	-15	NA	20320009	20314282	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_20314825_20315335_20315477_20319638_20319787_20319878
transcript_135230.known	chr22	+	3744	6	FSM	ENSG00000185252.19	ENST00000437275.5	3744	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	103.606949573858	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTACCCTCTGCTTTGT	20389882	False	NA	30	True	AATAAA	-41	NA	20394402	20408455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20394663_20395332_20395419_20399594_20399691_20400631_20400759_20401276_20401373_20405376
transcript_135234.known	chr22	+	3714	6	FSM	ENSG00000185252.19	ENST00000611540.4	3714	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	86.2173996360363	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCTGCTTTGTTCATGT	20389594	True	NA	36	True	AATAAA	-26	NA	20394114	20408461	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20394335_20394562_20394663_20395332_20395419_20400631_20400759_20401276_20401373_20405376
transcript_135238.known	chr22	+	3900	5	FSM	ENSG00000185252.19	ENST00000400451.7	3900	5	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	47.9374592568275	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTACCCTCTGCTTTGT	20389630	True	NA	30	True	AATAAA	-41	NA	20394150	20408455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20394663_20395332_20395419_20400631_20400759_20401276_20401373_20405376
transcript_13525.known	chr1	-	2892	23	FSM	ENSG00000143437.21	ENST00000515192.5	2892	23	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_21	105.502340266237	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTGGATAGTATGGCTT	-150871780	True	NA	-13	True	NA	NA	NA	150876708	150811680	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_150812111_150813171_150813339_150814076_150814240_150816258_150816407_150816787_150816891_150817081_150817203_150817360_150817434_150817919_150818031_150823193_150823346_150826542_150826618_150829092_150829228_150829903_150829966_150831817_150831904_150832333_150832400_150834537_150834641_150836279_150836494_150839440_150839655_150842423_150842469_150846262_150846308_150852761_150852807_150858348_150858461_150861246_150861303_150876542
transcript_135250.known	chr22	+	2788	5	FSM	ENSG00000185252.19	ENST00000357502.5	2788	5	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	93.1299495328973	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTTCCAGTGAACATTA	20389640	True	NA	19	True	AATAAA	-20	NA	20394160	20407681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20394335_20395332_20395419_20400631_20400759_20401276_20401373_20405376
transcript_135258.known	chr22	+	2789	4	FSM	ENSG00000185252.19	ENST00000403682.7	2789	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	73.1087470066947	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCAGATGTGGCGGCAT	20389607	True	NA	NA	False	NA	NA	NA	20394127	20407407	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20394663_20400631_20400759_20401276_20401373_20405376
transcript_135269.known	chr22	+	591	2	FSM	ENSG00000185252.19	ENST00000420626.1	591	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTCTGCAGAGGAGTCAG	20389668	True	NA	NA	False	NA	NA	NA	20394188	20405493	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20394663_20405376
transcript_135273.known	chr22	+	3758	4	FSM	ENSG00000185252.19	ENST00000493734.5	3758	4	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	38.262252939418	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACTTTCCAGTGAACATT	20389667	True	NA	18	True	AATAAA	-19	NA	20394187	20407680	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20395419_20400631_20400759_20401276_20401373_20405376
transcript_135274.known	chr22	-	3463	11	FSM	ENSG00000244486.9	ENST00000622235.5	3463	11	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	15.9527427108946	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTGATCACTTCCTGTT	-20436313	True	NA	-1	True	AATAAA	-16	NA	20437825	20424583	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_20426283_20427397_20427551_20429224_20429341_20429535_20429654_20429729_20429834_20430428_20430558_20430689_20430909_20431017_20431538_20431744_20431847_20431929_20431989_20437581
transcript_135275.known	chr22	-	3248	11	FSM	ENSG00000244486.9	ENST00000623402.1	3248	11	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	19.5386795869117	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTTCCCTTCCCTGGCGC	-20436314	True	NA	NA	False	GGGGCT	-13	NA	20437826	20424814	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_20426283_20427397_20427551_20429224_20429356_20429535_20429654_20429729_20429834_20430428_20430558_20430689_20430909_20431017_20431538_20431744_20431847_20431929_20431989_20437581
transcript_13528.known	chr1	-	3538	22	FSM	ENSG00000143437.21	ENST00000354396.6	3538	22	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	76.078220875688	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTAAGAGGTTTTTCCTC	-150871651	True	NA	NA	False	NA	NA	NA	150876579	150810858	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_150812111_150813171_150813339_150814076_150814240_150816258_150816401_150816787_150816891_150817081_150817203_150817360_150817434_150817919_150818031_150823193_150823346_150826542_150826618_150829092_150829228_150829903_150829981_150831817_150831904_150832333_150832400_150834537_150834641_150836279_150836494_150839440_150839655_150842423_150842469_150846262_150846308_150852761_150852807_150858348_150858461_150876542
transcript_135283.nic	chr22	-	2564	7	NIC	ENSG00000099910.17	novel	2528	7	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_6	10.4243305140746	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTAGCCACAGCCTCA	-20495052	True	NA	-7	True	AATAAA	-27	NA	20495863	20441518	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_20442439_20446442_20446677_20457807_20458001_20464857_20465577_20471349_20471516_20488984_20489213_20495759
transcript_135284.known	chr22	-	2528	7	FSM	ENSG00000099910.17	ENST00000328879.9	2528	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	9.24962461700774	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTAGCCACAGCCTCA	-20494984	True	NA	-7	True	AATAAA	-27	NA	20495795	20441518	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_20442439_20446442_20446677_20457807_20458001_20464857_20465577_20471349_20471516_20488984_20489245_20495759
transcript_135288.nnic	chr22	-	2379	6	NIC	ENSG00000099910.17	novel	2528	7	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	13.3955216397123	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTAGCCACAGCCTCA	-20495001	True	NA	-7	True	AATAAA	-27	NA	20495812	20441518	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_20442439_20446442_20446677_20457807_20458001_20464857_20465577_20488984_20489245_20495759
transcript_135294.known	chr22	+	3351	18	FSM	ENSG00000099917.17	ENST00000263205.11	3351	18	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_9	74.4707740913953	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGTTGTTCATCACTGT	20500614	True	NA	12	True	AATAAA	-18	NA	20507609	20587619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20507747_20537116_20537205_20551435_20551488_20553144_20553175_20554935_20555149_20564449_20564689_20566466_20566818_20568520_20568632_20575112_20575233_20582610_20582748_20582839_20582968_20583112_20583248_20583329_20583394_20584358_20584426_20584854_20585016_20585100_20585268_20585727_20585827_20586567
transcript_135303.known	chr22	+	3210	17	FSM	ENSG00000099917.17	ENST00000406969.5	3210	17	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	72.3042346183818	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCAGTTGTTCATCACT	20500622	True	NA	10	True	AATAAA	-16	NA	20507617	20587617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20507736_20537116_20537205_20551435_20551488_20553144_20553175_20554935_20555149_20564449_20564689_20566466_20566818_20568520_20568632_20582610_20582748_20582839_20582968_20583112_20583248_20583329_20583394_20584358_20584426_20584854_20585016_20585100_20585268_20585727_20585827_20586567
transcript_135305.nnic	chr22	+	3230	17	NNC	ENSG00000099917.17	novel	3252	17	NA	NA	17	0	intron_retention	FALSE	canonical	2	18	junction_8	72.3742173964596	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCAGTTGTTCATCACT	20500562	True	NA	10	True	AATAAA	-16	NA	20507557	20587617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_+_20507747_20537116_20537205_20551435_20551488_20553144_20553175_20554935_20555149_20564449_20564689_20566466_20566818_20568520_20568632_20582661_20582748_20582839_20582968_20583112_20583248_20583329_20583394_20584358_20584426_20584854_20585016_20585100_20585268_20585727_20585827_20586567
transcript_135316.known	chr22	+	2235	16	FSM	ENSG00000099917.17	ENST00000382974.6	2235	16	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	75.8930826887405	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAACTGGGATAGGCGCAG	20500645	True	NA	NA	False	NA	NA	NA	20507640	20586867	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20507747_20537116_20537205_20551435_20551488_20553144_20553175_20564449_20564689_20566466_20566818_20568520_20568632_20582610_20582748_20582839_20582968_20583112_20583248_20583329_20583394_20584358_20584426_20584854_20585016_20585100_20585268_20585727_20585827_20586567
transcript_135335.known	chr22	+	788	6	FSM	ENSG00000226287.9	ENST00000452055.5	788	6	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	18.7552659272003	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGTGGGTTCGTCGTCTG	20702565	True	NA	7	True	AATAAA	-17	NA	20702920	20704606	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20703123_20703467_20703525_20703632_20703752_20703967_20704041_20704187_20704229_20704310
transcript_135340.known	chr22	-	6751	55	FSM	ENSG00000241973.11	ENST00000255882.11	6751	55	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_31	46.3467613842578	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGAGGTTTTGTGTCAA	-20857345	True	NA	1	True	AATAAA	-26	NA	20858811	20707690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_20708099_20709295_20709380_20709907_20709998_20710698_20710859_20711340_20711462_20712485_20712612_20712692_20712798_20713280_20713391_20714457_20714529_20714627_20714701_20717707_20717779_20718692_20718823_20721297_20721419_20726487_20726542_20727229_20727398_20727773_20727865_20729312_20729507_20729631_20729712_20729891_20730012_20732970_20733099_20733735_20733844_20734042_20734195_20734394_20734554_20742227_20742356_20742607_20742765_20744627_20744721_20747582_20747703_20749904_20749995_20751292_20751377_20751673_20751756_20752902_20753028_20753109_20753181_20761303_20761387_20764816_20764951_20765099_20765237_20765584_20765694_20793192_20793244_20796145_20796315_20798583_20798688_20799092_20799277_20799670_20799767_20801972_20802106_20803190_20803321_20804299_20804401_20804973_20805166_20807361_20807459_20810966_20811033_20813357_20813507_20818482_20818550_20819640_20819901_20820538_20820612_20824325_20824415_20834561_20834656_20838614_20838732_20858569
transcript_135344.known	chr22	-	2301	17	FSM	ENSG00000241973.11	ENST00000485963.5	2301	17	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	12.5522346118131	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATATGCTACAGATCAGTG	-20857346	True	NA	NA	False	AATAAA	-18	NA	20858812	20798477	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_20798688_20799092_20799277_20799670_20799767_20801972_20802106_20803190_20803321_20804299_20804401_20804973_20805166_20807361_20807459_20810966_20811033_20813357_20813507_20818482_20818550_20819640_20819901_20820538_20820612_20824325_20824415_20834561_20834656_20838614_20838732_20858569
transcript_135345.known	chr22	+	4259	5	FSM	ENSG00000099940.12	ENST00000215730.12	4259	5	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_1	12.3768937944866	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTTTAACCTCTTTTT	20855579	True	NA	8	True	AATAAA	-19	NA	20859006	20891214	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20859348_20870336_20870534_20881048_20881135_20883470_20883570_20887678
transcript_135351.nnic	chr22	+	3299	4	NNC	ENSG00000099942.13	novel	2037	4	NA	NA	-44	-147	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_3	274.197414689166	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATCGAGTGTCTTTTCTT	NA	False	NA	13	True	ATTAAA	-19	NA	20917362	20953600	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_+_20918246_20933778_20934245_20949710_20951266_20953205
transcript_135352.nnic	chr22	+	3443	4	NNC	ENSG00000099942.13	novel	2037	4	NA	NA	-44	-3	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_3	274.197414689166	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTTCGGTGTTTCAGTG	NA	False	NA	17	True	AATAAA	-24	NA	20917362	20953744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_+_20918246_20933778_20934245_20949710_20951266_20953205
transcript_135353.known	chr22	+	5342	3	FSM	ENSG00000099942.13	ENST00000354336.8	5342	3	0	0	0	0	multi-exon	FALSE	canonical	3	591	junction_1	16	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCGGTGTTTCAGTGTCT	20910382	True	NA	20	True	AATAAA	-27	NA	20917406	20953747	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20918246_20933778_20934245_20949710
transcript_135355.known	chr22	+	2037	4	FSM	ENSG00000099942.13	ENST00000411769.1	2037	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	286.440608542543	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCGGTGTTTCAGTGTCT	20910409	True	NA	20	True	AATAAA	-27	NA	20917433	20953747	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20918246_20933778_20934245_20949710_20949928_20953205
transcript_135356.known	chr22	+	684	2	FSM	ENSG00000237476.1	ENST00000444039.1	684	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCCTGGTATGTGTGGAG	20957077	False	NA	NA	False	AATAAA	-15	NA	20957091	20964679	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20957487_20964390
transcript_135357.known	chr22	+	4282	21	FSM	ENSG00000099949.21	ENST00000646124.2	4282	21	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_14	9.55654226171789	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACGAAATTGTGTGGCA	20979076	True	NA	21	True	AATAAA	-34	NA	20982296	20999032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20982572_20983026_20983090_20985840_20985898_20987503_20987584_20988009_20988119_20988788_20988873_20989624_20989683_20990385_20990526_20991627_20991830_20992213_20992370_20992793_20992905_20993661_20993755_20993923_20994020_20994103_20994270_20994557_20994728_20994869_20995027_20995745_20995873_20995962_20996113_20996695_20996802_20996885_20996967_20997231
transcript_135359.nic	chr22	+	4244	21	NIC	ENSG00000099949.21	novel	4282	21	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_15	22.5208792013101	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACGAAATTGTGTGGCA	20979069	True	NA	21	True	AATAAA	-34	NA	20982289	20999032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_20982572_20983026_20983090_20985840_20985898_20987503_20987584_20988009_20988119_20988788_20988873_20989624_20989683_20990385_20990526_20991627_20991830_20992213_20992370_20992793_20992905_20993661_20993755_20993923_20994020_20994103_20994270_20994557_20994728_20994914_20995027_20995745_20995873_20995962_20996113_20996695_20996802_20996885_20996967_20997231
transcript_135366.nic	chr22	+	4890	20	NIC	ENSG00000099949.21	novel	4282	21	NA	NA	-292	0	intron_retention	FALSE	canonical	3	89	junction_10	8.88117932824171	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACGAAATTGTGTGGCA	20981892	False	NA	21	True	AATAAA	-34	NA	20981976	20999032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_20982572_20983026_20983090_20985840_20985898_20987503_20987584_20988009_20988119_20988788_20988873_20989624_20989683_20990385_20990526_20991627_20991830_20992213_20992370_20992793_20992905_20993661_20993755_20993923_20994020_20994103_20994728_20994869_20995027_20995745_20995873_20995962_20996113_20996695_20996802_20996885_20996967_20997231
transcript_135375.known	chr22	+	4058	16	FSM	ENSG00000099949.21	ENST00000646506.1	4058	16	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_6	8.59043395618379	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCCCTAAAAAGCAAATTTT	20988016	False	NA	5	True	AATAAA	-18	NA	20988030	20999016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_20988119_20988788_20988873_20989624_20989683_20990385_20990526_20991627_20991830_20992213_20992370_20992793_20992905_20993661_20993755_20993923_20994020_20994103_20994728_20994869_20995027_20995745_20995873_20995962_20996113_20996695_20996802_20996885_20996967_20997231
transcript_135376.known	chr22	-	1144	5	FSM	ENSG00000184436.12	ENST00000399133.2	1144	5	0	0	0	0	multi-exon	TRUE	canonical	3	110	junction_4	61.5832769508087	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGAGGGCCTGCTGTCTGGC	NA	False	NA	-31	True	AATAAA	-13	NA	21002196	20999776	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21000433_21000646_21000788_21001255_21001412_21001831_21001912_21002085
transcript_135377.known	chr22	-	2307	5	FSM	ENSG00000099960.13	ENST00000403586.5	2307	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.58113883008419	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGTGGCATTCTTTGT	-21032525	False	NA	-2	True	NA	NA	NA	21032549	21028717	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21029231_21029335_21029445_21029710_21030352_21030830_21031856_21032530
transcript_135379.nnic	chr22	-	1218	4	NNC	ENSG00000184436.12	novel	1913	4	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	116.000957850451	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCTGCTGTCTGGCTCAG	-21000320	False	NA	-27	True	AATAAA	-17	NA	21001806	20999772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_21000433_21000646_21000788_21001255_21001412_21001545
transcript_13538.known	chr1	-	2427	21	FSM	ENSG00000143437.21	ENST00000505755.5	2427	21	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_17	46.569410561011	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCTTTCTGTAAACAGAA	-150871681	True	NA	-55	True	AAAAAG	-2	NA	150876609	150811960	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_150812111_150813171_150813339_150814076_150814240_150816258_150816407_150816787_150816891_150817081_150817203_150817360_150817434_150817919_150818031_150823193_150823346_150826542_150826618_150829092_150829228_150829903_150829981_150831817_150831904_150832333_150832400_150834537_150834641_150836279_150836494_150839440_150839655_150846262_150846308_150852761_150852807_150858348_150858461_150876542
transcript_135381.known	chr22	-	1080	4	FSM	ENSG00000184436.12	ENST00000466670.1	1080	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_3	66.6949939817242	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTCACCAGAGCGGCAG	-21000631	True	NA	NA	False	NA	NA	NA	21002117	21000229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21000433_21000646_21001412_21001831_21001912_21002085
transcript_135382.known	chr22	-	1678	4	FSM	ENSG00000161149.12	ENST00000292748.7	1678	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	0.816496580927726	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTCCTACCGCCTTATA	-21014140	True	NA	NA	False	NA	NA	NA	21014292	21008636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21009454_21011383_21011591_21013041_21013185_21013781
transcript_135383.known	chr22	-	1974	3	FSM	ENSG00000161149.12	ENST00000422086.5	1974	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGGCTGAGATAGCTTTA	-21014135	True	NA	NA	False	AAAAAG	-27	NA	21014287	21008192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21009454_21011383_21011591_21013781
transcript_135385.known	chr22	+	2298	2	FSM	ENSG00000230513.3	ENST00000452284.1	2298	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCTGAAATAAGCCTGT	21001692	True	NA	NA	False	NA	NA	NA	21002207	21010342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_21002830_21008666
transcript_135387.known	chr22	+	1263	2	FSM	ENSG00000230513.3	ENST00000429962.2	1269	2	0	6	0	5	multi-exon	FALSE	canonical	3	21	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAGAATTGCTTCTATA	21001906	False	NA	20	True	ATTAAA	-33	NA	21001921	21003272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_21002830_21002917
transcript_135388.known	chr22	+	1020	1	FSM	ENSG00000230513.3	ENST00000662660.1	1020	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGTGTTTTAAGAATTG	21001729	True	NA	12	True	ATTAAA	-25	NA	21002244	21003264	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_21002200_21003300
transcript_135389.known	chr22	-	1809	2	FSM	ENSG00000184436.12	ENST00000471073.1	1809	2	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCTGCTGTCTGGCTCAG	-21000309	False	1486	-27	True	AATAAA	-17	NA	21001795	20999772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21000433_21000646
transcript_135390.known	chr22	-	1671	3	FSM	ENSG00000184436.12	ENST00000476667.5	1671	3	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_2	56	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCCATAATAAAGCGGATT	-21000620	True	NA	-56	True	NA	NA	NA	21002106	20999801	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21000433_21000646_21001412_21001831
transcript_135392.known	chr22	+	6831	3	FSM	ENSG00000169635.10	ENST00000407464.7	6831	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	12.5	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGTGGGACCTCCAT	21417336	False	NA	20	True	ATTAAA	-15	NA	21417370	21451463	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_21417561_21442758_21442858_21444921
transcript_135395.nic	chr22	-	2420	18	NIC	ENSG00000183506.17	novel	2294	17	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_11	62.2136068072919	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTGAGGTTTTGTGTC	NA	False	NA	NA	False	AATAAA	-24	NA	21517551	21472999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_21473406_21474596_21474681_21475210_21475301_21476001_21476161_21476643_21476765_21477789_21477916_21477996_21478102_21478584_21478695_21479758_21479830_21479929_21480003_21483019_21483091_21484004_21484135_21486799_21486928_21487564_21487673_21487871_21488024_21488223_21488382_21491993_21492095_21517324
transcript_1354.nnic	chr1	-	3145	12	NIC	ENSG00000078369.18	novel	3163	12	NA	NA	-212	0	combination_of_known_splicesites	FALSE	canonical	1	11	junction_11	729.818317706197	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGTGGTGATTATTT	-1890516	False	761	-1	True	AATAAA	-19	NA	1890613	1785285	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_1787054_1787321_1787438_1789052_1789270_1790394_1790597_1793244_1793312_1804418_1804582_1806474_1806539_1815755_1815863_1817836_1817876_1825396_1825500_1839189_1839239_1890363
transcript_135410.nic	chr22	-	2903	17	NIC	ENSG00000183506.17	novel	2294	17	NA	NA	-18	0	intron_retention	FALSE	canonical	3	50	junction_10	64.0153485013555	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTGAGGTTTTGTGTC	NA	False	NA	NA	False	AATAAA	-24	NA	21517551	21472999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_21473406_21474596_21474681_21475210_21475301_21476001_21476765_21477789_21477916_21477996_21478102_21478584_21478695_21479758_21479830_21479929_21480003_21483019_21483091_21484004_21484135_21486799_21486928_21487564_21487673_21487871_21488024_21488223_21488382_21491993_21492095_21517324
transcript_135423.known	chr22	-	1906	13	FSM	ENSG00000183506.17	ENST00000479693.1	1906	13	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_6	52.5284975566174	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGCCTGGGCAACAGAGT	NA	False	NA	NA	False	NA	NA	NA	21517520	21477412	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21477916_21477996_21478102_21478584_21478695_21479758_21479830_21479929_21480003_21483019_21483091_21484004_21484135_21486799_21486928_21487564_21487673_21487871_21488024_21488223_21488382_21491993_21492095_21517324
transcript_135427.known	chr22	-	2414	3	FSM	ENSG00000183506.17	ENST00000470274.5	2414	3	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_2	52	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTTGGAATCTGTGAGG	NA	False	NA	NA	False	AATAAA	-15	NA	21477143	21473008	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21473406_21474596_21474681_21475210
transcript_135431.known	chr22	+	2861	4	FSM	ENSG00000185651.15	ENST00000342192.9	2861	4	0	0	0	0	multi-exon	FALSE	canonical	3	2253	junction_1	216.378269601075	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTAGTCGTGTGGGTTTCTT	21556578	True	NA	16	True	AATAAA	-18	NA	21567713	21624034	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_21567772_21592860_21592957_21610856_21611044_21621514
transcript_135435.known	chr22	+	3451	4	FSM	ENSG00000185651.15	ENST00000496722.1	3451	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	1237.07836812746	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTAGTCGTGTGGGTTTCTT	21556594	True	NA	16	True	AATAAA	-18	NA	21567729	21624034	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_21568378_21592860_21592957_21610856_21611044_21621514
transcript_135438.known	chr22	+	2932	3	FSM	ENSG00000185651.15	ENST00000545681.2	2932	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	1357	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTAGTCGTGTGGGTTTCTT	NA	False	NA	16	True	AATAAA	-18	NA	21567546	21624034	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_21567772_21610856_21611044_21621514
transcript_135441.known	chr22	-	1410	5	FSM	ENSG00000161179.14	ENST00000415762.6	1410	5	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_3	76.4832498002013	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTGGTTTATCAGCTG	-21626910	True	NA	-4	True	AATAAA	-20	NA	21630064	21628088	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21628788_21629009_21629188_21629307_21629408_21629542_21629762_21629850
transcript_135442.known	chr22	-	1309	5	FSM	ENSG00000161179.14	ENST00000292778.11	1309	5	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_3	68.8344935334023	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTGGTTTATCAGCTG	-21626868	True	NA	-4	True	AATAAA	-20	NA	21630022	21628088	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21628788_21629009_21629188_21629307_21629408_21629601_21629762_21629850
transcript_135444.known	chr22	-	1494	4	FSM	ENSG00000161179.14	ENST00000473985.1	1494	4	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_1	16.1107279647928	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATAACGTGTGTCTT	-21626884	True	NA	-29	True	NA	NA	NA	21630038	21628113	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21628788_21629009_21629188_21629307_21629762_21629850
transcript_135446.known	chr22	-	1388	4	FSM	ENSG00000161179.14	ENST00000482998.1	1388	4	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_2	71.4438396380137	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTATATTAATAAAATAACG	-21626860	True	NA	-37	True	NA	NA	NA	21630014	21628121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21628788_21629009_21629408_21629601_21629762_21629850
transcript_135447.nic	chr22	-	1257	4	NIC	ENSG00000161179.14	novel	1410	5	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_1	105.994758780276	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTGGTTTATCAGCTG	-21626935	False	NA	-4	True	AATAAA	-20	NA	21630089	21628088	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_21628788_21629307_21629408_21629542_21629762_21629850
transcript_135448.known	chr22	-	1066	4	FSM	ENSG00000161179.14	ENST00000398873.4	1066	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	104.148398398098	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGCAATGCAAACACCTTC	-21626881	True	NA	-82	True	NA	NA	NA	21630035	21628166	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21628788_21629307_21629408_21629601_21629762_21629850
transcript_135451.known	chr22	-	1613	3	FSM	ENSG00000161179.14	ENST00000464015.5	1613	3	0	0	0	0	multi-exon	TRUE	canonical	3	298	junction_1	16	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTGGTTTATCAGCTG	-21626858	True	NA	-4	True	AATAAA	-20	NA	21630012	21628088	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21628788_21629009_21629762_21629850
transcript_135453.nic	chr22	-	1392	3	NIC	ENSG00000161179.14	novel	1410	5	NA	NA	-25	0	intron_retention	FALSE	canonical	3	79	junction_1	125.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTGGTTTATCAGCTG	-21626935	False	NA	-4	True	AATAAA	-20	NA	21630089	21628088	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_21628788_21629307_21629762_21629850
transcript_135456.nic	chr22	-	1912	2	NIC	ENSG00000161179.14	novel	1613	3	NA	NA	-25	0	intron_retention	FALSE	canonical	3	330	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTGGTTTATCAGCTG	-21626935	False	NA	-4	True	AATAAA	-20	NA	21630089	21628088	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_21629762_21629850
transcript_135457.known	chr22	-	1423	2	FSM	ENSG00000161179.14	ENST00000468686.5	1423	2	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTGGTTTATCAGCTG	-21626877	True	NA	-4	True	AATAAA	-20	NA	21630031	21628088	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21628788_21629307
transcript_135458.known	chr22	+	825	3	FSM	ENSG00000128228.5	ENST00000248958.5	825	3	0	0	0	0	multi-exon	FALSE	canonical	3	1048	junction_1	45	258	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCGTTTCACTGTGAGCCT	21631839	True	NA	29	True	ATTAAA	-17	NA	21642301	21644299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_21642524_21642861_21643059_21643893
transcript_135461.known	chr22	+	4213	22	FSM	ENSG00000100023.20	ENST00000417788.5	4213	22	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	82.1148468461237	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCAATTCTAATATCTG	21663956	True	NA	23	True	ATTAAA	-20	NA	21666022	21697912	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_21666132_21669912_21669963_21670298_21670361_21670565_21670612_21670996_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21685637_21685727_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731_21688850_21693815_21693873_21694592_21694666_21694754_21694818_21694936_21695071_21695393
transcript_135470.known	chr22	+	2692	21	FSM	ENSG00000100023.20	ENST00000679827.1	2692	21	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_19	63.2048257651265	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGCATCAGGTAAATTAAA	21663933	True	NA	-16	True	ATTAAA	-28	NA	21665999	21697873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_21666132_21669912_21669963_21670565_21670612_21670996_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731_21688850_21693815_21693873_21694592_21694666_21694754_21694818_21694936_21694967_21695393_21695497_21696746
transcript_135472.known	chr22	+	3875	21	FSM	ENSG00000100023.20	ENST00000406385.1	3875	21	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_20	50.6384241460968	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAAAGTCATAAGACTAC	21663973	True	NA	NA	False	TATAAA	-20	NA	21666039	21698276	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_21666132_21669912_21669963_21670565_21670612_21670996_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731_21688850_21693815_21693873_21694592_21694666_21694754_21694818_21694936_21695071_21695393_21695497_21696030
transcript_135473.known	chr22	+	2840	21	FSM	ENSG00000100023.20	ENST00000680393.1	2840	21	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_20	51.3849199668541	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGCCTGTCATCCCTGT	21663933	True	NA	NA	False	NA	NA	NA	21665999	21697013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_21666132_21669912_21669963_21670565_21670612_21670996_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731_21688850_21693815_21693873_21694592_21694666_21694754_21694818_21694936_21695071_21695393_21695497_21695842
transcript_135474.known	chr22	+	3343	21	FSM	ENSG00000100023.20	ENST00000680094.1	3343	21	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_20	51.3849199668541	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAAGGACCAAGGGCTGG	21663961	True	NA	NA	False	TTTAAA	-38	NA	21666027	21697578	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_21666132_21669912_21669963_21670565_21670612_21670996_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731_21688850_21693815_21693873_21694592_21694666_21694754_21694818_21694936_21695071_21695393_21695487_21695866
transcript_135475.known	chr22	+	4929	21	FSM	ENSG00000100023.20	ENST00000335025.12	4929	21	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_20	48.0589221685214	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCAATTTAGAGTGTATC	21663942	True	NA	NA	False	AATAAA	-20	NA	21666008	21700015	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_21666132_21669912_21669963_21670565_21670612_21670996_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731_21688850_21693815_21693873_21694592_21694666_21694754_21694818_21694936_21695071_21695393_21695497_21696746
transcript_135477.known	chr22	+	2625	21	FSM	ENSG00000100023.20	ENST00000626352.2	2625	21	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_19	63.328094081537	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGATGAGGGCATCAGGTA	21663955	True	NA	11	True	ATTAAA	-21	NA	21666021	21697866	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_21666132_21669912_21669963_21670565_21670612_21670996_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731_21688850_21693815_21693873_21694592_21694666_21694754_21694818_21694936_21695071_21695397_21695497_21696884
transcript_135486.known	chr22	+	4068	20	FSM	ENSG00000100023.20	ENST00000398831.8	4068	20	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_16	27.0308124173987	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTATTTTCAATTCTAAT	21663945	True	NA	18	True	ATTAAA	-15	NA	21666011	21697907	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_21666132_21669912_21669963_21670565_21670612_21670996_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731_21688850_21693815_21693873_21694592_21694666_21694754_21694818_21694936_21695071_21695393
transcript_135498.known	chr22	+	1996	15	FSM	ENSG00000100023.20	ENST00000680463.1	1996	15	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_13	21.9656503641109	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGATAGTCACGCTTATC	21663933	True	NA	NA	False	NA	NA	NA	21665999	21689606	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_21666132_21669912_21669963_21670565_21670612_21670996_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731
transcript_1355.known	chr1	-	3163	12	FSM	ENSG00000078369.18	ENST00000378609.9	3163	12	0	0	0	0	multi-exon	FALSE	canonical	3	1595	junction_11	320.105457829496	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGTGGTGATTATTT	-1863093	True	NA	-1	True	AATAAA	-19	NA	1891087	1785285	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1787054_1787321_1787438_1789052_1789270_1790394_1790597_1793244_1793312_1804418_1804582_1806474_1806539_1815755_1815863_1817836_1817876_1825396_1825500_1839189_1839239_1890819
transcript_135503.known	chr22	-	4297	5	FSM	ENSG00000100027.17	ENST00000339468.8	4297	5	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_3	15.5623744974859	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTGCCCTCAGTGGACGAG	-21735215	True	NA	-4	True	AATAAA	-24	NA	21735794	21697535	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21701219_21703369_21703479_21703838_21703883_21710627_21710909_21735614
transcript_135512.known	chr22	-	5881	9	FSM	ENSG00000100030.15	ENST00000215832.11	5881	9	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_1	51.5835184433943	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGCTTTATTTCACTAAA	-21854546	True	NA	-5	True	AGTAAA	-18	NA	21867645	21759656	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21764241_21769194_21769321_21772872_21772983_21788256_21788389_21788693_21788809_21799011_21799129_21805849_21806040_21807663_21807847_21867321
transcript_135521.known	chr22	-	1487	8	FSM	ENSG00000100030.15	ENST00000398822.7	1487	8	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_3	36.1205464735934	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACATATATTCTCCTAGG	-21854581	True	NA	-9	True	ATTAAA	-14	NA	21867680	21769039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21769321_21772872_21772983_21788256_21788389_21788693_21788809_21799011_21799129_21805849_21806040_21807663_21807847_21867321
transcript_135549.nic	chr22	-	2936	19	NIC	ENSG00000100038.20	novel	3061	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	95	junction_18	41.8417064071451	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGAGCTGGGGCCCCTTT	-21977867	True	NA	NA	False	ATTAAA	-16	NA	21982813	21957030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_21957596_21958491_21958694_21959131_21959233_21959586_21959737_21960320_21960450_21962428_21962603_21962746_21962894_21963922_21964029_21964160_21964316_21965284_21965376_21967602_21967717_21968618_21968776_21970209_21970407_21970979_21971062_21971876_21971952_21972611_21972719_21974356_21974489_21975639_21975808_21982729
transcript_135553.nic	chr22	-	3039	19	NIC	ENSG00000100038.20	novel	2834	18	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_18	62.7350149339699	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGAGCTGGGGCCCCTTT	-21977845	True	NA	NA	False	ATTAAA	-16	NA	21982791	21957030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_21957596_21958491_21958694_21959131_21959233_21959586_21959737_21960320_21960450_21962428_21962603_21962746_21962894_21963922_21964029_21964160_21964316_21965284_21965376_21967602_21967717_21968618_21968776_21970209_21970407_21971876_21971952_21972611_21972719_21974356_21974489_21975639_21975808_21975980_21976188_21982729
transcript_135557.nnic	chr22	-	2862	19	NNC	ENSG00000100038.20	novel	3061	18	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_3	55.6156341816948	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGAGCTGGGGCCCCTTT	-21977857	True	NA	NA	False	ATTAAA	-16	NA	21982803	21957030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_21957596_21958491_21958694_21959131_21959233_21959650_21959737_21960320_21960450_21962428_21962603_21962746_21962894_21963922_21964029_21964160_21964316_21965284_21965376_21967602_21967717_21968618_21968776_21970209_21970407_21970979_21971062_21971876_21971952_21972611_21972719_21974356_21974489_21975639_21975808_21982729
transcript_135567.known	chr22	-	3107	18	FSM	ENSG00000100038.20	ENST00000398793.6	3107	18	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_17	54.8106523629919	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGAGCTGGGGCCCCTTT	-21977804	True	NA	NA	False	ATTAAA	-16	NA	21982750	21957030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21957596_21958491_21958694_21959131_21959233_21959586_21959737_21960320_21960450_21962428_21962603_21962746_21962894_21963922_21964029_21964160_21964316_21965284_21965376_21967602_21967717_21968618_21968776_21970209_21970407_21971876_21971952_21972611_21972719_21974356_21974489_21975639_21975808_21982413
transcript_135568.known	chr22	-	2834	18	FSM	ENSG00000100038.20	ENST00000357179.10	2834	18	0	0	0	0	multi-exon	TRUE	canonical	3	83	junction_13	41.3565808790683	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGGCCCCTTTGCTGGT	-21977841	True	NA	NA	False	ATTAAA	-22	NA	21982787	21957024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21957596_21958491_21958694_21959131_21959233_21959586_21959737_21960320_21960450_21962428_21962603_21962746_21962894_21963922_21964029_21964160_21964316_21965284_21965376_21967602_21967717_21968618_21968776_21970209_21970407_21971876_21971952_21972611_21972719_21974356_21974489_21975639_21975808_21982729
transcript_13557.known	chr1	+	318	1	FSM	ENSG00000229357.1	ENST00000443545.1	318	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGGCCACTGCCTTATT	NA	False	NA	NA	False	AAAAAG	-15	NA	150903895	150904213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150903900_150904200
transcript_135578.nic	chr22	-	3840	18	NIC	ENSG00000100038.20	novel	4163	17	NA	NA	-9	0	intron_retention	FALSE	canonical	3	95	junction_17	42.6960773057788	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGAGCTGGGGCCCCTT	-21977876	True	NA	NA	False	ATTAAA	-15	NA	21982822	21957031	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_21958694_21959131_21959233_21959586_21959737_21960320_21960450_21962428_21962603_21962746_21962894_21963922_21964029_21964160_21964316_21965284_21965376_21967602_21967717_21968618_21968776_21970209_21970407_21970979_21971062_21971876_21971952_21972611_21972719_21974356_21974489_21975639_21975808_21982729
transcript_135595.nnic	chr22	-	2478	16	NIC	ENSG00000100038.20	novel	2834	18	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	2	27	junction_11	54.1415428914495	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGAGCTGGGGCCCCTTT	-21977845	True	NA	NA	False	ATTAAA	-16	NA	21982791	21957030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_21957596_21958491_21958694_21959131_21959233_21959586_21959737_21960320_21960450_21962428_21962603_21962746_21962894_21963922_21964029_21964160_21964316_21965284_21965376_21967602_21967717_21971876_21971952_21972611_21972719_21974356_21974489_21975639_21975808_21982729
transcript_13561.known	chr1	+	4370	22	FSM	ENSG00000143379.13	ENST00000368969.8	4370	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	22.742071454882	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTTTCTCTCTCTCAG	150923637	True	NA	22	True	GATAAA	-13	NA	150926411	150964744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150926518_150927703_150927975_150929966_150930119_150939939_150939975_150941328_150941429_150942562_150942689_150942851_150943054_150943919_150943994_150944917_150945109_150946885_150947013_150949121_150949279_150949369_150949526_150950457_150951091_150951364_150951482_150959177_150959348_150960562_150961192_150962129_150962159_150962586_150962720_150962973_150963140_150963529_150963742_150963994_150964084_150964249
transcript_135611.known	chr22	-	5149	8	FSM	ENSG00000100034.14	ENST00000263212.10	5149	8	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	9.07114735222145	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCGCCCGAGTCCTGC	-21950535	True	NA	-12	True	AATAAA	-15	NA	21952848	21919424	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21923472_21925568_21925663_21931147_21931292_21933390_21933580_21934023_21934227_21939531_21939681_21945842_21946109_21952791
transcript_135620.nic	chr22	-	4271	6	ISM	ENSG00000100034.14	ENST00000397495.8	1778	7	-63	3055	-46	-3055	5prime_fragment	FALSE	canonical	3	122	junction_1	5.17687164221791	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAATCAAGAATCAGTGAC	-21950581	True	NA	NA	False	AAAACA	-11	NA	21952894	21927930	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_-_21931292_21933390_21933580_21934023_21934227_21939531_21939681_21945842_21946109_21952791
transcript_135621.known	chr22	-	1778	7	FSM	ENSG00000100034.14	ENST00000397495.8	1778	7	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	7.60847480700888	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTGGCTGGGCATGCT	-21950518	True	NA	NA	False	AATAAA	-26	NA	21952831	21924875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_21925663_21931147_21931292_21933390_21933580_21934023_21934227_21939531_21939681_21945842_21946109_21952791
transcript_135627.known	chr22	-	5309	4	FSM	ENSG00000275004.4	ENST00000626650.3	5309	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	1.69967317119759	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTGCTGTATTGTTTT	-22506861	True	NA	NA	False	AATAAA	-18	NA	22508742	22484420	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_22489467_22494062_22494181_22507809_22507871_22508658
transcript_135630.known	chr22	-	2196	6	FSM	ENSG00000185686.18	ENST00000398743.6	2196	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.72046505340853	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGTCTTGTAGTATAT	NA	False	NA	1	True	AATAAA	-19	NA	22559340	22547700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_22548644_22549725_22550335_22550766_22551090_22556811_22556931_22557544_22557581_22559174
transcript_135632.known	chr22	+	3170	3	FSM	ENSG00000128266.9	ENST00000615612.2	3170	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	1	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGCATTGTCCCAGTGT	23070245	False	NA	14	True	AATAAA	-15	NA	23070518	23125032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23070571_23095246_23096419_23123086
transcript_135634.known	chr22	+	4990	11	FSM	ENSG00000100228.14	ENST00000263116.8	4990	11	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_8	3.04795013082563	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATGATTTGACCAGCTA	23145272	True	NA	NA	False	NA	NA	NA	23145476	23165663	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23145552_23146604_23146686_23150062_23150155_23152460_23152527_23153032_23153135_23155967_23156033_23157991_23158044_23158897_23158980_23159162_23159254_23160878_23160999_23161499
transcript_135640.known	chr22	+	2239	1	FSM	ENSG00000230701.2	ENST00000426721.2	2239	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTGGACGTGACTTGGC	23262726	False	NA	NA	False	AATAAA	-35	NA	23262766	23265005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23262800_23265000
transcript_135641.known	chr22	-	2382	5	FSM	ENSG00000133519.13	ENST00000255890.8	2382	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.82915619758885	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAGCAGTCCTGTTTTT	NA	False	NA	-5	True	AATAAA	-24	NA	23402567	23390605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_23391725_23399759_23400584_23401840_23401954_23402036_23402156_23402360
transcript_135642.known	chr22	+	1077	4	FSM	ENSG00000280623.1	ENST00000626825.1	1077	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	5.09901951359278	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAATAACAGTGATTTTAG	23536130	True	NA	NA	False	AATGAA	-1	NA	23536898	23547167	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23537137_23538760_23538839_23544227_23544307_23546485
transcript_135643.known	chr22	+	976	2	FSM	ENSG00000280623.1	ENST00000629869.1	976	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAATCAAGTAGAAAGG	23536112	True	NA	NA	False	NA	NA	NA	23536880	23539480	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23537137_23538760
transcript_135675.known	chr22	-	3041	12	FSM	ENSG00000228315.12	ENST00000421064.5	3041	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	20.2206832984905	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGCCTTGACCTCTTC	-23714342	True	NA	-5	True	NA	NA	NA	23717347	23653168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_23653353_23659864_23660001_23683724_23683868_23686830_23686996_23690231_23690357_23694118_23695518_23705428_23705542_23709129_23709242_23709785_23709868_23714186_23714343_23715008_23715195_23717107
transcript_135695.known	chr22	-	3350	12	FSM	ENSG00000228315.12	ENST00000445682.2	3350	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	19.5494710460876	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTCCCTCTCTTCATT	-23714351	True	NA	0	True	AATAAA	-20	NA	23717356	23638486	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_23638943_23659864_23660001_23683724_23683868_23690235_23690357_23694118_23695518_23700725_23700846_23705428_23705542_23709129_23709242_23709785_23709868_23714186_23714343_23715008_23715195_23717030
transcript_135696.known	chr22	-	567	2	FSM	ENSG00000128218.8	ENST00000248948.4	567	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTGTGAGGGTCATAAG	-23754366	True	NA	-17	True	NA	NA	NA	23754425	23752742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_23753199_23754314
transcript_135698.known	chr22	+	895	6	FSM	ENSG00000169314.15	ENST00000402217.8	895	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	2.99332590941915	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTCTTGGGTTATCTG	23762829	True	NA	15	True	AATAAA	-15	NA	23762989	23765863	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23763332_23764086_23764174_23764259_23764398_23764638_23764714_23764792_23764903_23765720
transcript_135699.known	chr22	+	681	6	FSM	ENSG00000169314.15	ENST00000305199.9	681	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	4.66476151587624	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTGTCTTGGGTTATC	23763046	False	NA	13	True	AATAAA	-13	NA	23763206	23765861	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23763332_23764086_23764174_23764259_23764403_23764638_23764714_23764792_23764903_23765720
transcript_135700.known	chr22	-	700	4	FSM	ENSG00000250479.9	ENST00000484558.3	700	4	0	0	0	0	multi-exon	FALSE	canonical	3	736	junction_2	95.0590459778669	219	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTGTGTGCCTCTCTC	-23745018	True	NA	-3	True	ATTAAA	-19	NA	23767972	23765833	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_23766027_23766127_23766276_23767373_23767594_23767833
transcript_135708.nic	chr22	+	2757	8	NIC	ENSG00000099953.10	novel	2261	8	NA	NA	-55	0	intron_retention	TRUE	canonical	2	2	junction_6	19.4558631842665	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGCTTGGTCTCCTT	23772773	False	NA	7	True	ATTAAA	-16	NA	23772790	23784316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_23772979_23779186_23779417_23780358_23780503_23780581_23780716_23780858_23781101_23781192_23781410_23781787_23782484_23783410
transcript_135709.known	chr22	+	2261	8	FSM	ENSG00000099953.10	ENST00000215743.8	2261	8	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	7.32900305050323	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGCTTGGTCTCCTT	23772526	True	NA	7	True	ATTAAA	-16	NA	23772848	23784316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23772979_23779186_23779417_23780358_23780503_23780581_23780716_23780858_23781101_23781192_23781410_23782225_23782484_23783410
transcript_135710.nic	chr22	+	2177	8	NIC	ENSG00000099953.10	novel	2261	8	NA	NA	-55	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_6	20.1099021197346	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGCTTGGTCTCCTT	23772773	False	NA	7	True	ATTAAA	-16	NA	23772790	23784316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_23772979_23779186_23779417_23780358_23780503_23780581_23780716_23780858_23781101_23781192_23781410_23782367_23782484_23783410
transcript_135718.known	chr22	+	1730	9	FSM	ENSG00000099956.20	ENST00000407422.8	1730	9	0	0	0	0	multi-exon	TRUE	canonical	3	1683	junction_5	202.542433825606	1074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTTTAACATAAAAATAATG	NA	False	NA	53	True	NA	NA	NA	23786930	23834540	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23787263_23791755_23791868_23793558_23793689_23800943_23801082_23803294_23803423_23816769_23816937_23825224_23825416_23833571_23833704_23834140
transcript_135721.known	chr22	+	1717	9	FSM	ENSG00000099956.20	ENST00000344921.11	1717	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	693.245221764997	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCTTCAACAGGTCATG	NA	False	NA	18	True	AATAAA	-19	NA	23786962	23834505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23787263_23791755_23791868_23793558_23793689_23800943_23801136_23803294_23803423_23816769_23816937_23825224_23825416_23833571_23833704_23834140
transcript_135724.known	chr22	+	5191	9	FSM	ENSG00000099956.20	ENST00000644036.2	5191	9	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_2	599.709395770151	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGGTCCCACGAAATCTG	NA	False	NA	NA	False	AATAAA	-20	NA	23786965	23838009	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23787263_23791755_23791895_23793558_23793689_23800943_23801082_23803294_23803423_23816769_23816937_23825224_23825416_23833571_23833704_23834140
transcript_135734.known	chr22	+	1731	7	FSM	ENSG00000099956.20	ENST00000646911.1	1731	7	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_2	655.439653125205	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCTACAAAAAAAAAAAAATA	23787204	False	NA	NA	False	AAAACA	-16	NA	23787257	23826248	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23787263_23791755_23791895_23793558_23793689_23800943_23801082_23803294_23803423_23816769_23816937_23825224
transcript_135735.known	chr22	-	1063	7	FSM	ENSG00000099958.15	ENST00000406855.7	1063	7	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	27.6008252694653	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGACCTGTTGCCTTTTAT	-23838502	True	NA	-5	True	AAGAAA	-29	NA	23839006	23834502	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_23834933_23837063_23837155_23837658_23837855_23838351_23838446_23838563_23838638_23838710_23838777_23838894
transcript_135741.known	chr22	-	3093	7	FSM	ENSG00000099958.15	ENST00000318109.12	3093	7	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	35.758448885077	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGACCTGTTGCCTTTTAT	-23838502	True	NA	-5	True	AAGAAA	-29	NA	23839006	23834502	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_23836963_23837063_23837155_23837658_23837855_23838351_23838446_23838563_23838638_23838710_23838777_23838894
transcript_135748.known	chr22	-	969	6	FSM	ENSG00000099958.15	ENST00000476077.1	969	6	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_3	10.5565145763173	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTTGGCCCACAGCACT	-23838508	True	NA	-15	True	AATAAA	-15	NA	23839012	23836733	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_23837155_23837658_23837855_23838351_23838446_23838563_23838638_23838710_23838777_23838894
transcript_135756.known	chr22	+	1642	4	FSM	ENSG00000099956.20	ENST00000491967.2	1642	4	0	0	0	0	multi-exon	FALSE	canonical	3	1872	junction_2	215.849227214018	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCTGGGGTCTCTAGCAG	NA	False	NA	NA	False	NA	NA	NA	23786979	23802060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23787263_23791755_23791868_23793558_23793689_23800943
transcript_13576.known	chr1	+	3854	20	FSM	ENSG00000143379.13	ENST00000498193.5	3854	20	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	22.5612125172675	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAAAGAGGTAGCTTTCT	150923706	False	NA	7	True	TATAAA	-18	NA	150926480	150963851	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150926545_150927703_150927975_150929966_150930119_150939939_150939975_150941328_150941429_150942562_150942689_150942851_150943054_150943919_150943994_150944917_150945109_150946885_150947013_150949121_150949279_150949369_150949526_150950457_150951091_150951364_150951482_150959177_150959348_150960562_150961192_150962129_150962159_150962586_150962720_150962973_150963140_150963529
transcript_135761.known	chr22	-	755	3	FSM	ENSG00000099958.15	ENST00000464110.1	755	3	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_2	65	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGGCCCACCTGAATAAAC	-23838500	True	NA	-48	True	NA	NA	NA	23839004	23836766	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_23837155_23837658_23837732_23838710
transcript_135764.known	chr22	+	1500	8	FSM	ENSG00000099956.20	ENST00000263121.12	1500	8	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_3	880.564243968095	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAATTTCTTCAACAGGT	NA	False	NA	14	True	AATAAA	-15	NA	23787010	23834501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23787263_23791755_23791895_23793558_23793689_23803294_23803423_23816769_23816937_23825224_23825416_23833571_23833704_23834140
transcript_135766.known	chr22	+	2388	13	FSM	ENSG00000133460.20	ENST00000398356.6	2388	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	13.6920495990272	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	23856871	23885536	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23856992_23857420_23857532_23862103_23862203_23868480_23868642_23875116_23875242_23877041_23877172_23877720_23877870_23882458_23882647_23882758_23882870_23883771_23883874_23883948_23884025_23884301_23884430_23884648
transcript_135771.known	chr22	+	1555	12	FSM	ENSG00000133460.20	ENST00000316185.9	3088	12	88	1445	2	-66	multi-exon	FALSE	canonical	1	2	junction_5	13.9875978124188	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAAAGCCAGCTACTGTC	23857941	False	NA	NA	False	NA	NA	NA	23857962	23884867	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23858030_23862103_23862203_23868480_23868642_23875116_23875242_23877041_23877172_23877720_23877870_23882458_23882647_23882758_23882870_23883771_23883874_23883948_23884025_23884301_23884430_23884648
transcript_135782.known	chr22	+	1048	8	FSM	ENSG00000133460.20	ENST00000405286.6	1048	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	11.0822527732683	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTATGGTGTTAAAATGC	23856807	True	NA	7	True	ATTAAA	-15	NA	23856950	23882951	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23856992_23857420_23857532_23862103_23862203_23868480_23868642_23875116_23875242_23877041_23877172_23882458_23882647_23882758
transcript_135797.known	chr22	+	730	5	FSM	ENSG00000133460.20	ENST00000405847.5	730	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	12.852528934027	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGGTATCAGTCAACAC	23856790	True	NA	NA	False	NA	NA	NA	23856933	23877328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23856992_23862103_23862203_23868480_23868642_23875116_23875242_23877041
transcript_135798.known	chr22	+	742	5	FSM	ENSG00000133460.20	ENST00000423972.5	742	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	12.9807549857472	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATCGAATCCTCTATCCA	23857294	True	NA	NA	False	ATTAAA	-21	NA	23857416	23877287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23857532_23862103_23862203_23868480_23868642_23875120_23875242_23877041
transcript_13580.nic	chr1	-	2259	11	NIC	ENSG00000143418.20	novel	2323	11	NA	NA	7	0	intron_retention	FALSE	canonical	3	50	junction_10	172.55517958033	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCCTTGCAGTTATGT	-150974460	False	246	-20	True	AATAAA	-19	NA	150974470	150965185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_150966289_150966475_150966630_150966755_150966863_150967073_150967203_150967391_150967485_150967663_150967715_150967819_150967878_150968082_150968202_150968394_150968513_150968917_150969092_150974317
transcript_135801.known	chr22	+	557	3	FSM	ENSG00000240972.2	ENST00000215754.8	557	3	0	0	0	0	multi-exon	FALSE	canonical	3	30849	junction_2	2178	10620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTGCCTCGGGGTTCCTT	NA	False	NA	16	True	AATAAA	-15	NA	23894382	23895223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23894583_23894771_23894945_23895039
transcript_135804.known	chr22	+	589	2	FSM	ENSG00000240972.2	ENST00000465752.1	589	2	0	0	0	0	multi-exon	FALSE	canonical	3	35205	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCGGGGTTCCTTGGCT	23885158	True	NA	20	True	AATAAA	-19	NA	23894449	23895227	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23894583_23894771
transcript_135805.known	chr22	+	435	2	FSM	ENSG00000240972.2	ENST00000498385.1	435	2	0	0	0	0	multi-exon	FALSE	canonical	3	30849	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCGGGGTTCCTTGGCT	23885406	False	NA	20	True	AATAAA	-19	NA	23894697	23895227	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23894945_23895039
transcript_135809.known	chr22	-	1108	5	FSM	ENSG00000133433.11	ENST00000290765.9	1108	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	14.7732867026942	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGAGTTATTGGTTTTAC	NA	False	NA	NA	False	AATAAA	-26	NA	23961195	23957413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_23957933_23958284_23958459_23958550_23958702_23960293_23960382_23961019
transcript_13581.known	chr1	-	2323	11	FSM	ENSG00000143418.20	ENST00000368954.10	2323	11	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_10	77.0091552998733	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCCTTGCAGTTATGT	-150970233	True	NA	-20	True	AATAAA	-19	NA	150974835	150965185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_150966289_150966475_150966630_150966755_150966863_150967073_150967203_150967391_150967485_150967663_150967715_150967819_150967878_150968082_150968202_150968394_150968513_150968917_150969092_150974618
transcript_135812.known	chr22	-	819	5	FSM	ENSG00000133433.11	ENST00000404172.3	819	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	17.6971042829046	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGAAGCTCTGCACAGA	NA	False	NA	NA	False	NA	NA	NA	23961153	23957618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_23957933_23958326_23958459_23958550_23958702_23960293_23960382_23961019
transcript_13582.nnic	chr1	-	2498	11	NNC	ENSG00000143418.20	novel	2323	11	NA	NA	-384	0	intron_retention	FALSE	canonical	1	10	junction_10	184.065450315913	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCCTTGCAGTTATGT	-150975377	False	NA	-20	True	AATAAA	-19	NA	150975387	150965185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_150966289_150966475_150966630_150966755_150966863_150967073_150967203_150967391_150967485_150967663_150967715_150967819_150967878_150968082_150968202_150968394_150968513_150968917_150969092_150974995
transcript_135821.nnic	chr22	-	552	4	NIC	ENSG00000224205.2	novel	699	5	NA	NA	1	-57	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGAACCTGCTGTTAAAGA	NA	False	NA	NA	False	NA	NA	NA	23991420	23976928	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_23977068_23977400_23977578_23987318_23987470_23991335
transcript_135823.known	chr22	+	1582	3	FSM	ENSG00000099974.8	ENST00000215770.6	1582	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	430.5	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATAGATGCAATTATCAAT	NA	False	NA	NA	False	AATAAA	-18	NA	23966887	23972556	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23967023_23967385_23967562_23971285
transcript_135827.known	chr22	+	663	1	FSM	ENSG00000272787.1	ENST00000609736.1	663	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGTTAAACAGTCAGTCC	NA	False	NA	4	True	AATAAA	-18	NA	23969210	23969873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_23969200_23969900
transcript_135828.known	chr22	-	699	5	FSM	ENSG00000224205.2	ENST00000437021.2	699	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGTGTCCCACACTTGCT	NA	False	NA	NA	False	NA	NA	NA	23991421	23976871	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_23977068_23977400_23977578_23987318_23987470_23989126_23989216_23991335
transcript_135829.known	chr22	-	565	3	FSM	ENSG00000099977.15	ENST00000398344.9	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	1070	junction_2	41	1174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTTCTTACCTTCTAT	NA	False	NA	-6	True	AATAAA	-24	NA	23974441	23971369	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_23971624_23973767_23973944_23974306
transcript_135835.known	chr22	+	7233	37	FSM	ENSG00000099991.18	ENST00000263119.10	7233	37	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	9.33775523557488	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGCCTCTTTGCTCAC	24009859	True	NA	13	True	AATAAA	-13	NA	24011303	24178628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_24011368_24035443_24035521_24036088_24036182_24038347_24038462_24041138_24041274_24042903_24043085_24049090_24049221_24050824_24050975_24054872_24055160_24056191_24056361_24059226_24059364_24059923_24060142_24061946_24062026_24062958_24063147_24064034_24064188_24066986_24067182_24070799_24071043_24072353_24072511_24076168_24076285_24083227_24083390_24084578_24084786_24085005_24085152_24087451_24087714_24091582_24091844_24095930_24096083_24098013_24098193_24113565_24113749_24119366_24119699_24134301_24134416_24164399_24164564_24165529_24165627_24166638_24167314_24168446_24168522_24171712_24171996_24176110_24176276_24177503_24177818_24178052
transcript_135836.nic	chr22	+	1654	10	ISM	ENSG00000099991.18	ENST00000398319.6	7480	37	-63	122324	7	0	5prime_fragment	FALSE	canonical	3	21	junction_5	8.68089999316649	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAGAGAAAGTAGA	24009910	True	NA	NA	False	NA	NA	NA	24011354	24056304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_24011729_24035443_24035521_24036088_24036182_24038347_24038462_24041138_24041274_24042903_24043085_24049090_24049221_24050824_24050975_24054872_24055160_24056191
transcript_135837.known	chr22	+	1321	9	FSM	ENSG00000099991.18	ENST00000454754.5	1321	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	11.1740491765519	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAGAGAAAGTAGA	NA	False	NA	NA	False	NA	NA	NA	24011191	24056304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_24011368_24035443_24035521_24036088_24036182_24038347_24038462_24042903_24043085_24049090_24049221_24050824_24050975_24054872_24055160_24056191
transcript_135839.known	chr22	+	1472	9	FSM	ENSG00000099991.18	ENST00000445422.5	1472	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	10.8397416943394	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGACTTCCAGGAGCTTC	24009971	False	NA	NA	False	AAAAAG	-8	NA	24011415	24056318	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_24011729_24035443_24035521_24036088_24036182_24038347_24038462_24042903_24043085_24049090_24049221_24050824_24050975_24054872_24055160_24056191
transcript_135840.nic	chr22	+	2686	9	NIC	ENSG00000099991.18	novel	2422	8	NA	NA	-99	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	16.867127793433	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTGCCTCTTTGCTCA	NA	False	NA	12	True	AATAAA	-12	NA	24155738	24178627	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_24156077_24164399_24164564_24165529_24165627_24166638_24167314_24168446_24168522_24171712_24171996_24176110_24176276_24177503_24177818_24178052
transcript_135841.known	chr22	+	3172	15	FSM	ENSG00000099994.11	ENST00000358321.4	3172	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	2.55250976931509	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCTCCTGGTGTTCAT	24181431	True	NA	8	True	AAAACA	-18	NA	24181486	24189106	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_24181596_24183056_24183268_24183494_24183647_24184135_24184304_24184765_24184941_24185093_24185296_24185485_24185572_24185660_24185930_24186015_24186160_24186256_24186416_24187201_24187451_24187570_24187844_24187958_24188136_24188224_24188328_24188411
transcript_135845.known	chr22	+	6763	17	FSM	ENSG00000100014.20	ENST00000314328.14	6763	17	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	52.3772001327868	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTTTTTTGTTGGTTTT	24266049	True	NA	20	True	GATAAA	-15	NA	24270830	24417738	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_24270984_24276699_24276804_24302194_24302385_24313312_24313467_24321287_24322919_24324219_24324428_24328845_24328920_24330255_24330432_24334409_24334574_24338385_24338478_24347085_24347177_24363260_24363345_24365475_24365633_24369217_24369321_24411587_24411705_24412647_24412708_24414533
transcript_135846.known	chr22	+	6674	16	FSM	ENSG00000100014.20	ENST00000437398.5	6674	16	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	22.0468188685402	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTTTTTTGTTGGTTTTT	24266035	True	NA	21	True	GATAAA	-16	NA	24270816	24417739	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_24270984_24302194_24302385_24313312_24313467_24321287_24322919_24324219_24324428_24328845_24328920_24330255_24330432_24334409_24334574_24338385_24338478_24347085_24347177_24363260_24363345_24365475_24365633_24369217_24369321_24411587_24411705_24412647_24412708_24414533
transcript_135849.known	chr22	+	3525	15	FSM	ENSG00000100014.20	ENST00000541492.1	3525	15	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_13	55.3335433567033	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGAACTCAGCCGTGTGG	24266101	True	NA	NA	False	GGGGCT	-9	NA	24270882	24414773	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_24270984_24302194_24302385_24313312_24313467_24321287_24322919_24324219_24324428_24328845_24328920_24330255_24330432_24334409_24334574_24338385_24338478_24347085_24347177_24363260_24363345_24365475_24365633_24369217_24369321_24412647_24412708_24414533
transcript_135855.known	chr22	+	2565	7	FSM	ENSG00000100014.20	ENST00000421374.5	2565	7	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	27.7093044942589	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAATTGGAGGAAATAA	24266040	True	NA	34	True	AAGAAA	-17	NA	24270821	24330401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_24270984_24302194_24302385_24313312_24313467_24321287_24322919_24324219_24324428_24328845_24328920_24330255
transcript_135859.nic	chr22	+	2252	5	ISM	ENSG00000100014.20	ENST00000421374.5	2565	7	-40	6107	-35	-10	5prime_fragment	FALSE	canonical	3	163	junction_1	22.1641602593015	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGATCAGACCTGGATGA	24266000	True	NA	NA	False	AAGAAA	-34	NA	24270781	24324294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_24270984_24302194_24302385_24313312_24313467_24321287_24322919_24324219
transcript_13586.known	chr1	-	2544	11	FSM	ENSG00000143418.20	ENST00000271688.10	2544	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_10	182.623218677144	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGTAATATTTTCTTTT	-150974993	False	65	-7	True	AATAAA	-32	NA	150975003	150965172	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_150966289_150966475_150966630_150966755_150966863_150967073_150967203_150967391_150967485_150967663_150967715_150967819_150967878_150968082_150968202_150968394_150968513_150968917_150969132_150974618
transcript_135863.nic	chr22	+	315	2	ISM	ENSG00000100014.20	ENST00000416735.5	566	5	-101	21997	-35	-19381	5prime_fragment	FALSE	canonical	3	163	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAACCTGAAAACAGCTCT	24266000	True	NA	NA	False	AGTAAA	-20	NA	24270781	24302307	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_24270984_24302194
transcript_135866.nic	chr22	+	383	3	ISM	ENSG00000100014.20	ENST00000651059.1	6282	19	-19	114899	1	-19381	5prime_fragment	FALSE	canonical	3	52	junction_2	2.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAACCTGAAAACAGCTCT	24266036	True	NA	NA	False	AGTAAA	-20	NA	24270817	24302307	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_24270984_24276699_24276804_24302194
transcript_135867.known	chr22	+	6204	20	FSM	ENSG00000258555.6	ENST00000358654.2	6204	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	84.9259087222455	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGGCGTCTGAGTTCGT	24266116	True	NA	23	True	AATAAA	-36	NA	24270897	24442356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_24270984_24276699_24276804_24302194_24302385_24313312_24313467_24321287_24322919_24324219_24324428_24328845_24328920_24330255_24330432_24334409_24334574_24338385_24338478_24343481_24343604_24347085_24347177_24363260_24363345_24365475_24365633_24369217_24369321_24411587_24411705_24412647_24412708_24414533_24414745_24433130_24433737_24440582
transcript_135870.known	chr22	+	2412	3	FSM	ENSG00000128271.22	ENST00000611543.4	2412	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	14.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGGCGTCTGAGTTCGT	24423563	True	NA	23	True	AATAAA	-36	NA	24423596	24442356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_24423629_24433130_24433737_24440582
transcript_135871.nic	chr22	+	2718	3	NIC	ENSG00000128271.22	novel	2412	3	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	0.5	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGGCGTCTGAGTTCGT	24423586	True	NA	23	True	AATAAA	-36	NA	24423619	24442356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_24423958_24433130_24433737_24440582
transcript_135876.nnic	chr22	-	3350	6	NNC	ENSG00000138867.17	novel	3482	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	70.9213649050834	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTAGCCCCTGGCTGG	-24553148	True	NA	-25	True	AATAAA	-20	NA	24555182	24540437	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_24543098_24543841_24543955_24546913_24547006_24547907_24548074_24548916_24549002_24554948
transcript_135878.known	chr22	-	3435	6	FSM	ENSG00000138867.17	ENST00000435822.6	3435	6	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	17.2904597972408	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTAGCCCCTGGCTGG	-24553104	True	NA	-25	True	AATAAA	-20	NA	24555138	24540437	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_24543098_24543841_24544084_24546913_24547006_24547907_24548074_24548916_24549002_24554948
transcript_135879.known	chr22	-	1606	6	FSM	ENSG00000138867.17	ENST00000404664.7	1606	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	59.7708959277005	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGCAGAGCCCTGGCCG	-24555328	True	NA	NA	False	NA	NA	NA	24555935	24542397	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_24543098_24543841_24544084_24546913_24547006_24547907_24548074_24548916_24549002_24555614
transcript_135884.nnic	chr22	-	3409	5	NIC	ENSG00000138867.17	novel	3435	6	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_4	72.1850919511778	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTAGCCCCTGGCTGG	-24553163	True	NA	-25	True	AATAAA	-20	NA	24555197	24540437	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_24543098_24543841_24544084_24546913_24547006_24547907_24548074_24554948
transcript_135885.nnic	chr22	-	3495	5	NIC	ENSG00000138867.17	novel	3435	6	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_4	75.1747963083373	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTAGCCCCTGGCTGG	NA	False	NA	-25	True	AATAAA	-20	NA	24555949	24540437	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_24543098_24543841_24544084_24546913_24547006_24547907_24548074_24555614
transcript_135887.known	chr22	-	895	5	FSM	ENSG00000138867.17	ENST00000447813.6	895	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	80.4005596995444	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGTCTCCCCACAGACC	-24554482	False	NA	NA	False	NA	NA	NA	24555089	24542686	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_24543098_24546913_24547006_24547907_24548074_24548916_24549002_24554948
transcript_13589.nic	chr1	-	2285	11	NIC	ENSG00000143418.20	novel	2323	11	NA	NA	-92	-73	intron_retention	FALSE	canonical	3	50	junction_10	172.55517958033	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGCAATAAGTGTCAGAC	-150974559	False	NA	-23	True	AATAAA	-16	NA	150974569	150965258	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_150966289_150966475_150966630_150966755_150966863_150967073_150967203_150967391_150967485_150967663_150967715_150967819_150967878_150968082_150968202_150968394_150968513_150968917_150969092_150974317
transcript_135890.known	chr22	-	865	5	FSM	ENSG00000138867.17	ENST00000402766.5	865	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	78.2635770968846	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCCAGCTGCGCCCACAG	-24553091	True	NA	NA	False	NA	NA	NA	24555125	24542755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_24543101_24546913_24547006_24547907_24548074_24548916_24549002_24554948
transcript_135903.known	chr22	+	2540	17	FSM	ENSG00000100031.19	ENST00000400380.5	2540	17	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	61.5469523514365	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCTGGGCCTCAGTGTA	24601523	True	NA	30	True	NA	NA	NA	24603215	24629001	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_24603322_24607953_24608024_24608989_24609232_24609964_24610034_24610357_24610532_24611074_24611246_24614775_24614907_24615040_24615128_24620327_24620521_24620912_24621071_24623106_24623257_24623779_24623917_24627431_24627620_24627851_24627980_24628080_24628194_24628274_24628389_24628692
transcript_13591.nnic	chr1	-	2353	11	NNC	ENSG00000143418.20	novel	2323	11	NA	NA	-312	-73	intron_retention	FALSE	canonical	1	10	junction_10	184.065450315913	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGCAATAAGTGTCAGAC	-150975305	False	NA	-23	True	AATAAA	-16	NA	150975315	150965258	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_150966289_150966475_150966630_150966755_150966863_150967073_150967203_150967391_150967485_150967663_150967715_150967819_150967878_150968082_150968202_150968394_150968513_150968917_150969092_150974995
transcript_135913.known	chr22	+	2630	16	FSM	ENSG00000100031.19	ENST00000400382.6	2630	16	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	49.1648474239697	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCACTCTCTGGGCCTCA	24601500	True	NA	25	True	AATAAA	-44	NA	24603192	24628996	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_24603528_24607953_24608024_24609964_24610034_24610249_24610532_24611074_24611246_24614775_24614907_24615040_24615128_24620327_24620521_24620912_24621071_24623106_24623257_24623779_24623917_24627431_24627620_24627851_24627980_24628080_24628194_24628274_24628389_24628692
transcript_135919.nic	chr22	+	2581	16	NIC	ENSG00000100031.19	novel	2540	17	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	44.2490928971682	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCTGGGCCTCAGTGTA	24603106	False	NA	30	True	NA	NA	NA	24603138	24629001	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_24603528_24607953_24608024_24609964_24610034_24610357_24610532_24611074_24611246_24614775_24614907_24615040_24615128_24620327_24620521_24620912_24621071_24623106_24623257_24623779_24623917_24627431_24627620_24627851_24627980_24628080_24628194_24628274_24628389_24628692
transcript_13592.nnic	chr1	-	2456	11	NNC	ENSG00000143418.20	novel	2323	11	NA	NA	-438	-73	intron_retention	FALSE	canonical	2	14	junction_10	182.911590666092	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGCAATAAGTGTCAGAC	-150975431	False	NA	-23	True	AATAAA	-16	NA	150975441	150965258	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_150966289_150966475_150966630_150966755_150966863_150967073_150967203_150967391_150967485_150967663_150967715_150967819_150967878_150968082_150968202_150968394_150968513_150968917_150969092_150975018
transcript_135923.nic	chr22	+	2478	16	NIC	ENSG00000100031.19	novel	2540	17	NA	NA	-3	0	intron_retention	FALSE	canonical	3	30	junction_3	50.5931044928281	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCTGGGCCTCAGTGTA	24601451	True	NA	30	True	NA	NA	NA	24603143	24629001	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_24603322_24607953_24608024_24609964_24610034_24610249_24610532_24611074_24611246_24614775_24614907_24615040_24615128_24620327_24620521_24620912_24621071_24623106_24623257_24623779_24623917_24627431_24627620_24627851_24627980_24628080_24628194_24628274_24628389_24628692
transcript_135926.nic	chr22	+	2370	16	NIC	ENSG00000100031.19	novel	2540	17	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	45.8824585217488	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCTGGGCCTCAGTGTA	24601451	True	NA	30	True	NA	NA	NA	24603143	24629001	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_24603322_24607953_24608024_24609964_24610034_24610357_24610532_24611074_24611246_24614775_24614907_24615040_24615128_24620327_24620521_24620912_24621071_24623106_24623257_24623779_24623917_24627431_24627620_24627851_24627980_24628080_24628194_24628274_24628389_24628692
transcript_135936.nic	chr22	+	2512	15	NIC	ENSG00000100031.19	novel	2540	17	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_2	48.8327528929308	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCTGGGCCTCAGTGTA	24603106	False	NA	30	True	NA	NA	NA	24603138	24629001	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_24603528_24607953_24608024_24610357_24610532_24611074_24611246_24614775_24614907_24615040_24615128_24620327_24620521_24620912_24621071_24623106_24623257_24623779_24623917_24627431_24627620_24627851_24627980_24628080_24628194_24628274_24628389_24628692
transcript_135943.nic	chr22	+	2301	15	NIC	ENSG00000100031.19	novel	2540	17	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_2	50.4435429010311	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCTGGGCCTCAGTGTA	24601451	True	NA	30	True	NA	NA	NA	24603143	24629001	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_24603322_24607953_24608024_24610357_24610532_24611074_24611246_24614775_24614907_24615040_24615128_24620327_24620521_24620912_24621071_24623106_24623257_24623779_24623917_24627431_24627620_24627851_24627980_24628080_24628194_24628274_24628389_24628692
transcript_135975.known	chr22	-	1828	5	FSM	ENSG00000178026.13	ENST00000446942.5	1828	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	46.2513513316098	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCAACCTCAGGGTCACT	-24591739	True	NA	-2	True	AATAAA	-29	NA	24593066	24585619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_24586412_24588213_24588330_24588678_24589266_24589820_24589950_24592862
transcript_135986.known	chr22	-	1417	5	FSM	ENSG00000178026.13	ENST00000404045.6	1417	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	42.5110279809839	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGACACCCGCCTCTGC	-24591737	True	NA	-31	True	NA	NA	NA	24593064	24585648	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_24586412_24588213_24588330_24589820_24589950_24592216_24592424_24592862
transcript_135987.known	chr22	+	3466	4	FSM	ENSG00000100028.12	ENST00000215829.8	3466	4	0	0	0	0	multi-exon	FALSE	canonical	3	2405	junction_1	51.0968579160098	850	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGTGTCATAGTGATCA	24522077	True	NA	20	True	ATTAAA	-14	NA	24555998	24574971	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_24556072_24557656_24557801_24567983_24568177_24571915
transcript_135990.nic	chr22	-	2420	4	NIC	ENSG00000178026.13	novel	1233	4	NA	NA	-39	0	intron_retention	FALSE	canonical	0	0	junction_2	53.2687108493866	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCTTTTCTGCATCACC	-24591791	True	NA	-17	True	AATAAA	-14	NA	24593118	24585634	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_24586412_24588213_24588330_24588678_24589950_24592862
transcript_135992.known	chr22	-	1233	4	FSM	ENSG00000178026.13	ENST00000318753.13	1233	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	47.5558151602468	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCTTTTCTGCATCACC	-24591746	True	NA	-17	True	AATAAA	-14	NA	24593073	24585634	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_24586412_24588213_24588330_24589820_24589950_24592862
transcript_135995.known	chr22	-	2276	4	FSM	ENSG00000178026.13	ENST00000460524.5	2276	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	49.5737385674669	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCCCGCAATAAAGAGTGA	-24591752	True	NA	-44	True	NA	NA	NA	24593079	24585661	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_24586412_24588213_24589394_24589820_24589950_24592862
transcript_136.known	SIRV4003	+	4001	1	FSM	SIRV4003A	SIRV4003	4001	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	TATAAA	-45	NA	0	4001	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV4003_+_0_4000
transcript_1360.known	chr1	-	3145	11	FSM	ENSG00000078369.18	ENST00000610897.4	3145	11	0	0	0	0	multi-exon	TRUE	canonical	3	368	junction_10	658.790717906681	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTGGTGATTATTTA	-1863123	True	NA	0	True	AATAAA	-20	NA	1891117	1785284	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1787054_1787321_1787438_1789052_1789270_1790394_1790597_1793244_1793312_1804418_1804582_1806474_1806539_1815755_1815863_1817836_1817876_1825396_1825500_1890819
transcript_136007.known	chr22	-	597	2	FSM	ENSG00000282012.1	ENST00000633827.1	597	2	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-24695443	True	NA	1	True	AATAAA	-22	NA	24696003	24691121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_24691562_24695846
transcript_136008.known	chr22	+	6701	25	FSM	ENSG00000167037.19	ENST00000400358.9	6701	25	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_14	4.78423336480244	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGGGCAACATAATGAGA	24805630	True	NA	NA	False	NA	NA	NA	24806210	24927578	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_24806345_24806440_24806485_24844896_24844973_24847633_24847797_24850279_24850433_24854995_24855064_24855284_24855431_24855548_24855681_24859715_24859841_24867092_24867161_24868375_24868540_24868722_24868856_24876576_24876716_24879461_24879527_24884052_24884199_24886599_24886729_24893430_24893614_24895222_24895292_24897971_24898560_24901832_24901958_24905104_24905188_24912642_24912753_24917657_24917755_24919825_24919994_24924185
transcript_136021.nic	chr22	+	2327	5	ISM	ENSG00000197077.14	ENST00000358431.8	10732	13	-62	158317	-62	-10558	5prime_fragment	FALSE	canonical	3	14	junction_4	4.26468052730799	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAAGAAAGAGAACTCCAG	24950664	True	NA	NA	False	NA	NA	NA	24952653	25039131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_24952773_25025632_25025785_25027944_25029541_25032608_25032697_25038759
transcript_136022.nnic	chr22	+	2165	4	NIC	ENSG00000197077.14	novel	10732	13	NA	NA	-52	-10558	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	9.46337971105226	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAAGAAAGAGAACTCCAG	24950674	True	NA	NA	False	NA	NA	NA	24952663	25039131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_24952773_25027944_25029541_25032608_25032697_25038759
transcript_136023.known	chr22	+	10732	13	FSM	ENSG00000197077.14	ENST00000358431.8	10732	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	8.88819441731559	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGTGCGTCCATGTGTGA	24950726	True	NA	20	True	AATAAA	-27	NA	24952715	25197448	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_24952773_25025632_25025785_25027944_25029541_25032608_25032697_25038759_25041526_25049229_25049365_25170819_25170939_25174239_25174490_25177347_25177523_25181698_25181824_25184976_25185120_25190701_25190785_25192405
transcript_136027.nic	chr22	-	1901	7	NIC	ENSG00000100068.14	novel	1676	8	NA	NA	-104	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	1.70782512765993	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATAGACGATTATA	-25405223	True	NA	NA	False	ATTAAA	-19	NA	25405481	25351461	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_25351903_25354595_25354813_25357254_25357427_25359826_25360224_25375812_25376009_25381380_25381579_25405201
transcript_136034.known	chr22	+	1364	5	FSM	ENSG00000100058.13	ENST00000382734.10	1389	5	25	0	6	0	multi-exon	FALSE	canonical	3	79	junction_1	15.833114033569	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATTCTTCAATCAATACC	25446013	True	NA	32	True	AATAAA	-24	NA	25448104	25461678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_25448285_25455711_25455841_25457258_25457402_25459415_25459516_25460866
transcript_136051.known	chr22	+	9277	21	FSM	ENSG00000100077.16	ENST00000324198.11	9277	21	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	8.13080561814141	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCGACTTCCGTGTGCTGT	25564163	True	NA	16	True	AATAAA	-18	NA	25564674	25729294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_25565154_25604376_25604454_25644591_25644666_25661575_25661678_25663629_25663705_25667738_25667801_25672295_25672348_25674436_25674529_25678815_25678916_25685169_25685249_25687536_25687668_25690188_25690284_25695106_25695215_25703509_25703577_25704108_25704210_25709897_25709965_25711067_25711164_25714407_25714571_25718244_25718382_25721283_25721398_25722288
transcript_136078.nic	chr22	-	3988	15	NIC	ENSG00000100099.21	novel	5066	14	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_6	40.5017636300304	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGCATTTTTTTGTGAC	-26481875	True	NA	-20	True	AATAAA	-36	NA	26483852	26452082	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_26453405_26457858_26457968_26458444_26458578_26463916_26464827_26465454_26465552_26466050_26466105_26466225_26466263_26468550_26468624_26470718_26470814_26472301_26472419_26472831_26472940_26476992_26477137_26479264_26479356_26481721_26482241_26483673
transcript_136108.known	chr22	-	5066	14	FSM	ENSG00000100099.21	ENST00000398145.7	5066	14	0	0	0	0	multi-exon	TRUE	canonical	3	78	junction_13	29.3350367086565	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTTTAACTGACTCACAG	-26481806	True	NA	NA	False	AATAAA	-35	NA	26483783	26450881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_26453405_26457858_26457968_26458444_26458578_26463916_26464827_26465454_26465552_26466225_26466263_26468550_26468624_26470718_26470814_26472301_26472419_26472831_26472940_26476992_26477137_26479264_26479356_26481721_26482241_26483673
transcript_136109.nic	chr22	-	3852	14	NIC	ENSG00000100099.21	novel	3786	14	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_13	38.4596922633825	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGCATTTTTTTGTGAC	-26481864	True	NA	-20	True	AATAAA	-36	NA	26483841	26452082	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_26453405_26457858_26457968_26458444_26458578_26463916_26464827_26465454_26465552_26466225_26466263_26468550_26468624_26470718_26470814_26472301_26472419_26472831_26472940_26476992_26477137_26479264_26479356_26481721_26482241_26483744
transcript_13611.known	chr1	+	1045	8	FSM	ENSG00000143379.13	ENST00000368963.5	1045	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	27.1684090255501	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTCTTCTCTACAATTT	150923649	True	NA	NA	False	NA	NA	NA	150926423	150945110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150926518_150927703_150927975_150929966_150930119_150939939_150939975_150941328_150941429_150942562_150942689_150943919_150943994_150944917
transcript_136110.known	chr22	-	3786	14	FSM	ENSG00000100099.21	ENST00000336873.9	3786	14	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_13	27.9460596242245	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGCATTTTTTTGTGAC	-26481818	True	NA	-20	True	AATAAA	-36	NA	26483795	26452082	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_26453405_26457858_26457968_26458444_26458578_26463916_26464827_26465454_26465552_26466225_26466263_26468550_26468624_26470718_26470814_26472301_26472419_26472831_26472940_26476992_26477137_26479264_26479356_26481721_26482241_26483764
transcript_136112.known	chr22	-	3936	14	FSM	ENSG00000100099.21	ENST00000439453.5	3936	14	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_8	42.6224653934169	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGCATTTTTTTGTGAC	-26481859	True	NA	-20	True	AATAAA	-36	NA	26483836	26452082	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_26453405_26457858_26457968_26458444_26458578_26463916_26464827_26465454_26465552_26466225_26466263_26468550_26468624_26470718_26470923_26472301_26472419_26472831_26472940_26476992_26477137_26479264_26479356_26481721_26482241_26483764
transcript_136153.known	chr22	-	6136	13	FSM	ENSG00000100099.21	ENST00000466781.5	6136	13	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_12	39.7782045290578	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGCATTTTTTTGTGAC	-26481860	True	NA	-20	True	AATAAA	-36	NA	26483837	26452082	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_26453405_26457858_26457968_26458444_26458578_26463916_26464827_26465454_26465552_26466225_26468624_26470718_26470814_26472301_26472419_26472831_26472940_26476992_26477137_26479264_26479356_26481721_26482241_26483744
transcript_136156.known	chr22	+	3370	4	FSM	ENSG00000128203.7	ENST00000215906.6	3370	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	11.0855260988773	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGTGGTGAGGTCATCT	26428566	True	NA	12	True	AATAAA	-21	NA	26429259	26445015	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_26429487_26433391_26434502_26442458_26442573_26443096
transcript_136163.known	chr22	-	2896	16	FSM	ENSG00000100109.17	ENST00000405938.5	2896	16	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_14	59.5201553164043	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGCCCCTAAGAGGGAT	-26507824	False	NA	-59	True	NA	NA	NA	26512499	26491985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_26492369_26494138_26494305_26494796_26494940_26496072_26496317_26496720_26496890_26498868_26498976_26499103_26499632_26501899_26502053_26503665_26503794_26506302_26506460_26506774_26506929_26510063_26510282_26510616_26510703_26511118_26511196_26512098_26512176_26512393
transcript_136164.nic	chr22	-	3074	16	NIC	ENSG00000100109.17	novel	2896	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_14	61.039732051254	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTAACTTCTTTACTCAGG	-26507821	True	NA	0	True	AATAAA	-26	NA	26512496	26491926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_26492369_26494138_26494305_26494796_26494940_26496072_26496317_26496720_26496890_26498868_26498976_26499103_26499632_26501899_26502053_26503665_26503794_26506302_26506460_26506774_26506929_26510063_26510282_26510616_26510703_26511118_26511318_26512098_26512176_26512393
transcript_136166.known	chr22	-	3539	15	FSM	ENSG00000100109.17	ENST00000407690.6	3539	15	0	0	0	0	multi-exon	TRUE	canonical	3	141	junction_10	21.0940556478234	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATGCATTAAAGAGTCAT	-26507798	True	NA	NA	False	AATAAA	-21	NA	26512473	26491239	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_26492369_26494138_26494305_26494796_26494940_26496072_26496317_26496720_26496890_26498868_26498976_26499103_26499632_26501899_26502053_26503665_26503794_26506302_26506460_26506774_26506929_26510063_26510282_26510616_26510703_26512098_26512176_26512393
transcript_136178.known	chr22	+	4020	7	FSM	ENSG00000100104.13	ENST00000215917.11	4020	7	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_2	20.8299997332907	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGACCTAACTCATTCCTA	26480164	True	NA	6	True	AATAAA	-17	NA	26483876	26494658	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_26484100_26486022_26486064_26488028_26488289_26488389_26488489_26490043_26490199_26491024_26491071_26491462
transcript_136183.known	chr22	-	2974	14	FSM	ENSG00000100109.17	ENST00000407431.5	2974	14	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_10	21.4351919893735	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTAACTTCTTTACTCAGG	-26507702	True	NA	0	True	AATAAA	-26	NA	26512377	26491926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_26492369_26494138_26494305_26494796_26494940_26496072_26496317_26496720_26496890_26498868_26498976_26499103_26499632_26501899_26502053_26503665_26503794_26506302_26506460_26506774_26506929_26510063_26510282_26510616_26510703_26512098
transcript_136184.known	chr22	+	981	2	FSM	ENSG00000261188.2	ENST00000565764.2	1663	2	26	656	8	-656	multi-exon	FALSE	canonical	3	31	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGAAGAAGGGACCTTT	26512132	True	NA	NA	False	NA	NA	NA	26512554	26513912	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_26513035_26513411
transcript_136185.known	chr22	+	2032	1	FSM	ENSG00000261188.2	ENST00000566814.1	2032	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGACTTTGCTACTTCTT	26512114	True	NA	21	True	AGTAAA	-18	NA	26512536	26514568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_26512500_26514600
transcript_136197.nnic	chr22	-	1991	8	NNC	ENSG00000128294.16	novel	5653	7	NA	NA	-36	-30	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	195.125495985721	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTTTGTGCCTTACT	-26586139	True	NA	-12	True	AATAAA	-13	NA	26590168	26525775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_26526268_26527605_26527688_26528213_26528263_26532694_26532746_26536287_26536487_26540788_26541719_26544603_26544676_26590052
transcript_13620.known	chr1	+	1551	14	FSM	ENSG00000143412.10	ENST00000368947.9	1551	14	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_6	4.0265391779392	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGCTGTTGTTTGTGTTC	150982233	True	NA	7	True	NA	NA	NA	150982291	150995634	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_150982380_150982486_150982584_150983089_150983181_150983337_150983435_150983974_150984070_150984280_150984395_150984585_150984677_150986335_150986416_150986601_150986662_150987871_150987957_150988090_150988187_150988282_150988342_150994576_150994700_150995259
transcript_136201.known	chr22	-	5653	7	FSM	ENSG00000128294.16	ENST00000338754.9	5653	7	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_6	34.5273643490042	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATATCTTCTCATCAGGAT	-26586103	True	NA	-12	True	AATAAA	-18	NA	26590132	26521995	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_26526268_26528213_26528263_26532694_26532746_26536287_26536487_26540788_26541719_26544603_26544676_26590052
transcript_136206.known	chr22	-	1968	7	FSM	ENSG00000128294.16	ENST00000398110.6	1968	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	167.877931843349	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGGGTTTTTTTTTTCTT	-26565355	False	NA	18	True	AATAAA	-43	NA	26565368	26525745	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_26526268_26528213_26528263_26532694_26532746_26536287_26536487_26540788_26541719_26544603_26544676_26565223
transcript_13621.known	chr1	-	2623	10	FSM	ENSG00000143409.17	ENST00000683666.2	2542	10	0	-81	0	81	multi-exon	FALSE	canonical	2	5	junction_9	6.99205898780101	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCCCAAAAAGGTGAAACCC	-151006338	False	NA	65	True	NA	NA	NA	151006902	150996753	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_150997368_150997623_150997780_150998081_150998274_150999368_150999512_150999861_150999965_151000456_151000616_151001249_151001315_151001724_151001783_151002164_151002707_151006311
transcript_136214.nic	chr22	-	1846	6	NIC	ENSG00000128294.16	novel	5653	7	NA	NA	-15	0	combination_of_known_junctions	TRUE	canonical	3	29	junction_5	164.579464089539	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGGGTTTTTTTTTTCTT	-26586118	True	NA	18	True	AATAAA	-43	NA	26590147	26525745	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_26526268_26528213_26528263_26532694_26532746_26536287_26536487_26540788_26541719_26590052
transcript_136227.known	chr22	+	809	6	FSM	ENSG00000196431.4	ENST00000354760.4	809	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.62480768092719	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTGTGCTTTTCAATTT	26621892	True	NA	6	True	AATAAA	-18	NA	26621962	26630669	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_26621987_26622584_26622636_26623233_26623353_26625480_26625623_26628287_26628431_26630339
transcript_136231.nic	chr22	+	4268	5	NIC	ENSG00000225783.9	novel	894	4	NA	NA	-10	27	intron_retention	FALSE	canonical	3	10	junction_1	15.8271917913444	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGTTCTAATTCAAATTC	26656777	True	NA	NA	False	NA	NA	NA	26657245	26670626	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_26657355_26663315_26663399_26665456_26666938_26667184_26667311_26668157
transcript_136233.nic	chr22	+	4205	5	NIC	ENSG00000225783.9	novel	594	4	NA	NA	9	27	intron_retention	FALSE	canonical	3	10	junction_1	13.6930639376292	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGTTCTAATTCAAATTC	NA	False	NA	NA	False	NA	NA	NA	26657234	26670626	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_26657355_26663315_26663399_26665530_26666938_26667184_26667311_26668157
transcript_136237.nic	chr22	+	4029	4	NIC	ENSG00000225783.9	novel	594	4	NA	NA	2	0	intron_retention	FALSE	canonical	3	10	junction_1	12.8322510366134	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CTTAAAAAAAAAAAAAAAAA	26656789	True	NA	NA	False	NA	NA	NA	26657257	26670599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_26657355_26663315_26663399_26665530_26666938_26668157
transcript_136247.known	chr22	-	7814	2	FSM	ENSG00000169184.6	ENST00000302326.5	7814	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTATATTTGTGGGTG	-27801070	True	NA	-9	True	AATAAA	-18	NA	27801756	27748276	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_27751097_27796762
transcript_136253.known	chr22	-	1017	12	FSM	ENSG00000180957.19	ENST00000634017.1	1017	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	303.580996585101	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCAGATGTGTGCTTGT	-27902303	True	NA	NA	False	NA	NA	NA	27919199	27853578	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_27853664_27854853_27854940_27858386_27858510_27860130_27860242_27873737_27873816_27894554_27894639_27896551_27896627_27897129_27897138_27897800_27897893_27910963_27911110_27914316_27914348_27919101
transcript_136254.known	chr22	-	2914	12	FSM	ENSG00000180957.19	ENST00000335272.10	2914	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	252.376800809379	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTGCTTGAGTGGTTG	-27902360	True	NA	-1	True	AATAAA	-19	NA	27919256	27851668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_27853664_27854853_27854940_27858386_27858510_27860130_27860242_27873737_27873816_27894554_27894639_27896551_27896627_27897129_27897138_27897800_27897893_27910963_27911110_27914316_27914348_27919171
transcript_136259.known	chr22	-	2826	11	FSM	ENSG00000180957.19	ENST00000320996.14	2826	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	308.409289743354	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTGTGCTTGAGTGGTT	-27902359	True	NA	-2	True	AATAAA	-18	NA	27919255	27851669	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_27853664_27858386_27858510_27860130_27860242_27873737_27873816_27894554_27894639_27896551_27896627_27897129_27897138_27897800_27897893_27910963_27911110_27914316_27914348_27919171
transcript_136264.known	chr22	+	4146	6	FSM	ENSG00000235954.8	ENST00000659843.1	4146	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	7.52595508889071	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCATCTAGCGAAAGCAGAAA	27917910	True	NA	NA	False	TTTAAA	-15	NA	27919422	28002641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_27919546_27935150_27935231_27997410_27997740_27997985_27998153_27998603_27998839_27999429
transcript_13627.known	chr1	+	2984	9	FSM	ENSG00000143363.17	ENST00000650332.1	2984	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	81.5075725009646	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTTATACTATTAAATAA	151005197	True	NA	16	True	NA	NA	NA	151008460	151035681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151008672_151017811_151017905_151018556_151018670_151024610_151024796_151025514_151025674_151027232_151027328_151028785_151028945_151031371_151031465_151033805
transcript_136270.known	chr22	+	746	5	FSM	ENSG00000235954.8	ENST00000452612.5	746	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	8.6421930087218	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATCAGGACTGGATGGTA	27917978	True	NA	NA	False	NA	NA	NA	27919490	27999476	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_27919546_27935150_27935231_27997410_27997740_27998603_27998839_27999429
transcript_136272.known	chr22	+	807	4	FSM	ENSG00000235954.8	ENST00000425112.2	1022	4	52	163	19	53	multi-exon	FALSE	canonical	3	12	junction_3	68.3585319392458	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGATAAGTGTCTGGC	27918005	True	NA	NA	False	NA	NA	NA	27919517	27986229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_27919546_27922017_27922179_27935150_27935231_27985691
transcript_136273.known	chr22	+	4790	4	FSM	ENSG00000235954.8	ENST00000453632.6	4790	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	5.73488351136175	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAAACCCATATGGTTTT	27917910	True	NA	NA	False	NA	NA	NA	27919422	28002588	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_27919546_27935150_27935231_27997410_27998839_27999429
transcript_136274.known	chr22	+	898	3	FSM	ENSG00000235954.8	ENST00000437713.7	920	3	22	0	3	0	multi-exon	FALSE	canonical	3	126	junction_2	16	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGTCAGATTATTCTT	27917913	True	NA	20	True	AATAAA	-30	NA	27919425	27924963	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_27919546_27922017_27922179_27924346
transcript_136277.known	chr22	+	626	3	FSM	ENSG00000235954.8	ENST00000670585.1	626	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	78	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGATTGTAATGGTTCC	27917985	True	NA	-26	True	AATAAA	-27	NA	27919497	27924714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_27919546_27922017_27922228_27924346
transcript_136279.known	chr22	+	874	3	FSM	ENSG00000235954.8	ENST00000454996.7	894	3	7	13	2	-13	multi-exon	FALSE	canonical	3	12	junction_2	6	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTATAAATTACCCAGTC	27917927	True	NA	NA	False	ATTAAA	-8	NA	27919439	27986379	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_27919546_27935150_27935231_27985691
transcript_13628.known	chr1	+	3025	8	FSM	ENSG00000143363.17	ENST00000271620.8	3025	8	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	48.5768904492073	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTCTTACTGTCTTTT	151005185	True	NA	13	True	ATTAAA	-16	NA	151008448	151035713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151008672_151017811_151017905_151018466_151018670_151024610_151024796_151025514_151025674_151027232_151027328_151028785_151028945_151033805
transcript_136280.known	chr22	-	766	3	FSM	ENSG00000180957.19	ENST00000471825.1	766	3	0	0	0	0	multi-exon	FALSE	canonical	3	671	junction_2	61	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAGGTATTTTAGAATTT	-27902348	True	NA	NA	False	NA	NA	NA	27919244	27910447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_27911110_27914316_27914348_27919171
transcript_136282.known	chr22	+	662	2	FSM	ENSG00000235954.8	ENST00000436996.1	662	2	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGAATTTAGCCCCTAAA	27917924	True	NA	NA	False	AAGAAA	-21	NA	27919436	27922570	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_27919546_27922017
transcript_136284.known	chr22	+	846	2	FSM	ENSG00000235954.8	ENST00000419253.1	846	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCTCGAATGGTATCT	NA	False	NA	NA	False	ATTAAA	-21	NA	27919400	27986392	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_27919546_27985691
transcript_136285.known	chr22	-	2963	11	NNC	ENSG00000180957.19	novel	2914	12	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	219.870325419325	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTGTGCTTGAGTGGTT	-27902410	True	NA	-2	True	AATAAA	-18	NA	27919306	27851669	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_27853664_27854853_27854940_27858386_27858510_27860130_27860242_27873737_27873816_27894554_27894639_27896551_27896635_27897800_27897893_27910963_27911110_27914316_27914348_27919171
transcript_136286.known	chr22	-	2560	16	FSM	ENSG00000183765.23	ENST00000416671.5	2560	16	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_12	316.668112277402	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGCTTCTGCTTGAT	-28742350	True	NA	-18	True	ATTAAA	-18	NA	28742422	28687742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28721517_28721632_28724976_28725125_28725242_28725368_28734402_28734728_28741768
transcript_136287.known	chr22	-	1971	16	FSM	ENSG00000183765.23	ENST00000382580.6	1971	16	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_13	298.652946113415	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCTGATGGAACCTGG	-28729590	True	NA	-38	True	NA	NA	NA	28741838	28687762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28730419_28730549_28734402_28734728_28741768
transcript_136288.nic	chr22	-	1977	16	NIC	ENSG00000183765.23	novel	1971	16	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_13	302.35164222401	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTGTGCTTCTGCTTGA	-28729613	True	NA	-19	True	ATTAAA	-17	NA	28741861	28687743	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28730455_28730549_28734402_28734728_28741768
transcript_136289.known	chr22	-	1923	16	FSM	ENSG00000183765.23	ENST00000650281.1	1923	16	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_14	315.664477289134	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAAAACCTGATGGAACC	-28729558	True	NA	-41	True	NA	NA	NA	28741806	28687765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28734402_28734728_28738081_28738198_28741768
transcript_13629.nic	chr1	+	2991	8	NIC	ENSG00000143363.17	novel	3025	8	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_2	60.4523762636207	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTCTTACTGTCTTTT	NA	False	NA	13	True	ATTAAA	-16	NA	151008392	151035713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_151008672_151017811_151017905_151018556_151018670_151024610_151024796_151025514_151025674_151027232_151027328_151028785_151028945_151033805
transcript_136291.known	chr22	-	1844	15	FSM	ENSG00000183765.23	ENST00000404276.6	1844	15	0	0	0	0	multi-exon	TRUE	canonical	3	639	junction_7	151.032500894776	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGCTTCTGCTTGAT	-28729572	True	NA	-18	True	ATTAAA	-18	NA	28741820	28687742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28734402_28734728_28741768
transcript_136292.known	chr22	-	1771	14	FSM	ENSG00000183765.23	ENST00000348295.7	1771	14	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_5	258.892269294762	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGCTTCTGCTTGAT	-28729586	True	NA	-18	True	ATTAAA	-18	NA	28741834	28687742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28734402_28734728_28741768
transcript_136298.known	chr22	+	792	6	FSM	ENSG00000100209.11	ENST00000420442.5	792	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	42.4575081699339	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGGCTCACACCTGTAAT	28739595	True	NA	3	True	AATAAA	-15	NA	28742060	28757213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_28742332_28743881_28743979_28744614_28744710_28745863_28746009_28751240_28751289_28757077
transcript_136300.known	chr22	+	846	6	FSM	ENSG00000100209.11	ENST00000495977.1	846	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	50.9195443813081	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTATATTTCTTTTCT	28742265	True	NA	6	True	AATAAA	-17	NA	28742700	28757510	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_28742729_28743881_28743979_28744614_28744710_28745863_28746009_28751240_28751289_28757077
transcript_136302.known	chr22	+	955	5	FSM	ENSG00000100209.11	ENST00000398941.6	955	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	58.031780086432	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATATTTCTTTTCTGGCTT	28739589	True	NA	11	True	AATAAA	-22	NA	28742054	28757515	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_28742332_28743881_28743979_28744614_28744710_28751240_28751289_28757077
transcript_136305.nic	chr22	+	691	4	ISM	ENSG00000100209.11	ENST00000216027.8	1106	6	-27	11463	-27	504	5prime_fragment	FALSE	canonical	3	102	junction_3	29.4882274061286	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAACACTTGTCCAAGGA	28739546	True	NA	NA	False	GATAAA	-28	NA	28742011	28746047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_28742332_28743881_28743979_28744614_28744705_28745863
transcript_136306.nic	chr22	+	1046	4	ISM	ENSG00000100209.11	ENST00000216027.8	1106	6	-27	11108	-27	859	5prime_fragment	FALSE	canonical	3	102	junction_3	29.4882274061286	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTATTTATTTTAAGGAAT	28739546	True	NA	NA	False	NA	NA	NA	28742011	28746402	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_28742332_28743881_28743979_28744614_28744705_28745863
transcript_136312.known	chr22	+	3964	5	FSM	ENSG00000159873.10	ENST00000249064.9	3964	5	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_1	42.1337157155644	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGAGATATTTGTATTA	28762294	True	NA	26	True	AATAAA	-20	NA	28772694	28789295	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_28773035_28773724_28773779_28780947_28781173_28783507_28783646_28786088
transcript_136313.known	chr22	+	1026	5	FSM	ENSG00000159873.10	ENST00000453543.5	1026	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	228.353344621882	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAGGAGAGAGCCAAGCT	28762303	True	NA	NA	False	NA	NA	NA	28772703	28786177	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_28773224_28773724_28773779_28780947_28781173_28783507_28783646_28786088
transcript_136316.known	chr22	+	3766	4	FSM	ENSG00000159873.10	ENST00000421503.6	3766	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	248.541076417293	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATTTGTATTACTCCAC	28762273	True	NA	32	True	AATAAA	-26	NA	28772673	28789301	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_28773035_28773724_28773779_28783507_28783646_28786088
transcript_136317.known	chr22	-	1794	6	NNC	ENSG00000100219.17	novel	1131	6	NA	NA	-3	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	714.933115752795	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCCTTGTTTGATTTCTT	-28768913	True	NA	-9	True	ATTAAA	-13	NA	28800572	28794559	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_28795733_28796046_28796124_28796149_28796193_28797076_28797206_28799056_28799154_28800297
transcript_136319.known	chr22	-	1824	5	FSM	ENSG00000100219.17	ENST00000403532.7	1824	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	765.44607092858	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTTTGATTTCTTCTA	-28768899	True	NA	-6	True	ATTAAA	-16	NA	28800558	28794556	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_28795733_28796046_28796193_28797076_28797206_28799041_28799154_28800297
transcript_136323.known	chr22	-	520	2	FSM	ENSG00000100219.17	ENST00000482720.1	520	2	0	0	0	0	multi-exon	FALSE	canonical	3	1800	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGCCTGTAATCCCAGC	-28768910	True	NA	NA	False	ATTAAA	-26	NA	28800569	28798905	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_28799154_28800297
transcript_136324.known	chr22	-	1690	5	FSM	ENSG00000100219.17	ENST00000405219.7	1690	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	766.428894288309	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACCCATGCAATTAAAAGG	-28768474	False	NA	-38	True	TTTAAA	-2	NA	28800133	28794588	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_28795733_28796046_28796193_28797076_28797206_28799056_28799154_28799959
transcript_136327.known	chr22	+	6181	9	FSM	ENSG00000183762.13	ENST00000400335.9	6181	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_7	2.6809513236909	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGGGCCCTATGCTGTC	29072729	True	NA	8	True	AATAAA	-23	NA	29073034	29146820	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29073228_29094257_29094421_29098861_29098954_29121356_29121482_29125262_29125417_29137341_29137675_29138623_29138783_29140281_29140367_29141943
transcript_136337.known	chr22	+	2128	15	FSM	ENSG00000186998.16	ENST00000334018.11	2128	15	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_14	6.04954037721133	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTCAGTGTGTGCT	29205500	True	NA	12	True	AATAAA	-23	NA	29205895	29259597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29206140_29214925_29215040_29215526_29215631_29225132_29225217_29226489_29226552_29231019_29231141_29231592_29231683_29232255_29232403_29233378_29233469_29233613_29233667_29234136_29234200_29234304_29234350_29243444_29243490_29254202_29254288_29258816
transcript_136338.known	chr22	+	2118	15	FSM	ENSG00000186998.16	ENST00000404820.7	2118	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	8.09036968454799	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTCAGTGTGTGCT	29205516	True	NA	12	True	AATAAA	-23	NA	29205911	29259597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29206140_29214925_29215040_29215526_29215631_29225132_29225217_29226489_29226552_29231019_29231141_29231592_29231683_29232255_29232403_29233378_29233469_29233613_29233667_29234136_29234200_29234304_29234350_29243444_29243490_29255270_29255362_29258816
transcript_136342.nic	chr22	+	2084	14	NIC	ENSG00000186998.16	novel	2128	15	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_3	7.12026859409608	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTCAGTGTGTGCT	29205845	False	NA	12	True	AATAAA	-23	NA	29205855	29259597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_29206140_29214925_29215040_29215526_29215631_29226489_29226552_29231019_29231141_29231592_29231683_29232255_29232403_29233378_29233469_29233613_29233667_29234136_29234200_29234304_29234350_29243444_29243490_29254202_29254288_29258816
transcript_136353.known	chr22	-	1777	7	FSM	ENSG00000100263.14	ENST00000216085.12	1777	7	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_4	83.9576612876329	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGACCTCCTTGGAGGCA	-29260747	True	NA	-22	True	AATAAA	-19	NA	29267981	29259871	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_29260238_29260325_29260614_29260701_29260865_29263834_29264219_29265478_29265669_29267425_29267578_29267747
transcript_136359.known	chr22	-	1555	7	FSM	ENSG00000100263.14	ENST00000413137.6	1555	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	196.370398312305	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGTTTAGAATAAAAACCAG	-29260711	True	NA	-54	True	NA	NA	NA	29267945	29259903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_29260238_29260325_29260614_29260701_29260869_29261199_29261426_29265478_29265669_29267425_29267578_29267747
transcript_13636.nic	chr1	+	2920	7	NIC	ENSG00000143363.17	novel	3025	8	NA	NA	-27	0	combination_of_known_junctions	TRUE	canonical	3	50	junction_6	63.2624603448909	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGTCTTACTGTCTT	NA	False	NA	11	True	ATTAAA	-14	NA	151008392	151035711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_151008672_151017811_151017905_151018466_151018670_151024610_151024796_151025514_151025674_151027232_151027328_151033805
transcript_136365.nic	chr22	-	3064	6	NIC	ENSG00000100263.14	novel	1777	7	NA	NA	-27	0	intron_retention	FALSE	canonical	3	316	junction_3	42.3320209770335	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGACCTCCTTGGAGGCA	-29260774	True	NA	-22	True	AATAAA	-19	NA	29268008	29259871	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_29260238_29260325_29260614_29260701_29260865_29263834_29265669_29267425_29267578_29267747
transcript_13638.known	chr1	+	2788	7	FSM	ENSG00000143363.17	ENST00000368936.5	2788	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	53.8392669588532	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTCTTACTGTCTTTT	151005219	True	NA	13	True	ATTAAA	-16	NA	151008482	151035713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151008672_151017811_151017905_151024610_151024796_151025514_151025674_151027232_151027328_151028785_151028945_151033805
transcript_136381.known	chr22	-	640	3	FSM	ENSG00000100263.14	ENST00000488106.1	640	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	208.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGACTTGCTGTAGGGCC	-29260687	True	NA	NA	False	NA	NA	NA	29267921	29265445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_29265669_29267334_29267578_29267747
transcript_136382.known	chr22	-	999	3	FSM	ENSG00000100263.14	ENST00000493894.1	999	3	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_2	1.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCGAGGCGGGCGGATCA	-29260726	True	NA	NA	False	NA	NA	NA	29267960	29265034	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_29265669_29267425_29267578_29267747
transcript_136386.known	chr22	+	2207	17	FSM	ENSG00000182944.18	ENST00000406548.5	2207	17	0	0	0	0	multi-exon	FALSE	canonical	3	2001	junction_8	749.160277306365	2556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCGGAGTTTTTTTTTC	29216199	True	NA	10	True	ATTAAA	-16	NA	29268272	29300336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29278029_29278217_29282389_29282558_29286922_29287135_29288605_29288787_29291564_29291600_29292136_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
transcript_136387.known	chr22	+	2400	17	FSM	ENSG00000182944.18	ENST00000397938.7	2400	17	0	0	0	0	multi-exon	FALSE	canonical	3	1422	junction_8	853.642526178259	2648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATCCTTCTCGGCCTCTG	29216194	True	NA	51	True	AATAAA	-21	NA	29268267	29300521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29278029_29278217_29282389_29282558_29286922_29287135_29288605_29288787_29291561_29291600_29292136_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
transcript_136388.known	chr22	+	2446	15	FSM	ENSG00000182944.18	ENST00000629659.2	2446	15	0	0	0	0	multi-exon	FALSE	canonical	2	29	junction_7	1520.85758735669	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTTCTCGGCCTCTGTTC	29267989	False	NA	54	True	AATAAA	-24	NA	29268008	29300524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273737_29273865_29278029_29278217_29282389_29282558_29286922_29287135_29292136_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
transcript_136389.known	chr22	+	1989	16	FSM	ENSG00000182944.18	ENST00000332035.10	1989	16	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_5	1290.53755208182	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCGGAGTTTTTTTTTC	29216252	True	NA	10	True	ATTAAA	-16	NA	29268325	29300336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29278029_29278217_29286922_29287135_29288605_29288787_29291561_29291600_29292136_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
transcript_136390.known	chr22	+	2267	15	FSM	ENSG00000182944.18	ENST00000331029.11	2267	15	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_8	1200.5525343587	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCTCGGCCTCTGTTCC	29216217	True	NA	55	True	AATAAA	-25	NA	29268290	29300525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29278029_29278217_29282389_29282558_29286922_29287135_29288605_29288756_29292499_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
transcript_136391.known	chr22	+	2189	18	FSM	ENSG00000182944.18	ENST00000414183.6	2189	18	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	1400.5879808286	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTTTTTTTTCTTCCTTC	29216242	True	NA	17	True	ATTAAA	-23	NA	29268315	29300343	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29274264_29274283_29278029_29278217_29282389_29282558_29286922_29287135_29288605_29288787_29291564_29291600_29292136_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
transcript_136393.known	chr22	+	2483	6	FSM	ENSG00000185340.15	ENST00000621062.4	2483	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	52.4770425995978	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTCTGTTTCTTGGGG	29306078	True	NA	24	True	AGTAAA	-14	NA	29307051	29312785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29307154_29308058_29308739_29310438_29310547_29310637_29310735_29310826_29310999_29311461
transcript_136396.nic	chr22	+	3248	6	NIC	ENSG00000185340.15	novel	2925	6	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	53.9236497281109	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTCTGTTTCTTGGGG	29306026	True	NA	24	True	AGTAAA	-14	NA	29306999	29312785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_29307154_29307345_29308739_29310438_29310547_29310637_29310735_29310826_29310999_29311461
transcript_136398.nnic	chr22	+	2734	6	NNC	ENSG00000185340.15	novel	2925	6	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	63.1772110812119	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTCTGTTTCTTGGGG	29306026	True	NA	24	True	AGTAAA	-14	NA	29306999	29312785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_+_29307154_29307345_29308739_29310438_29310547_29310637_29310735_29310826_29310999_29311975
transcript_13641.known	chr1	+	916	6	FSM	ENSG00000143363.17	ENST00000475722.5	916	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	68.3918123754591	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAAGATCCCTTCAGGAC	151005203	True	NA	NA	False	AAGAAA	-45	NA	151008466	151033966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151008672_151017811_151017905_151018466_151018670_151027232_151027328_151028785_151028945_151033805
transcript_136416.known	chr22	+	2482	6	FSM	ENSG00000185340.15	ENST00000611648.2	2482	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	57.9434206791418	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTCTGTTTCTTGGGG	29306084	True	NA	24	True	AGTAAA	-14	NA	29307057	29312785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29307187_29308086_29308739_29310438_29310547_29310637_29310735_29310826_29310999_29311461
transcript_136417.known	chr22	+	1803	6	FSM	ENSG00000185340.15	ENST00000406549.7	1803	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	57.5930551368826	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTCTGTTTCTTGGGG	29306049	True	NA	24	True	AGTAAA	-14	NA	29307022	29312785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29307154_29308086_29308739_29310438_29310547_29310637_29310735_29310826_29310999_29312142
transcript_136418.known	chr22	+	3382	5	FSM	ENSG00000185340.15	ENST00000618518.3	3382	5	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_4	25.4103817366052	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTCTGTTTCTTGGGG	29306084	True	NA	24	True	AGTAAA	-14	NA	29307057	29312785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29308739_29310438_29310547_29310637_29310735_29310826_29310999_29311461
transcript_136419.known	chr22	-	1431	3	FSM	ENSG00000100276.10	ENST00000216101.7	1431	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	1.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCGCCTGGGATTTCTGGG	-29315592	True	NA	1	True	AATAAA	-17	NA	29315697	29312932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_29313569_29313862_29313988_29315027
transcript_13642.nic	chr1	+	2717	6	NIC	ENSG00000143363.17	novel	2788	7	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_2	71.4713928785497	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGTCTTACTGTCTT	NA	False	NA	11	True	ATTAAA	-14	NA	151008392	151035711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_151008672_151017811_151017905_151024610_151024796_151025514_151025674_151027232_151027328_151033805
transcript_136420.known	chr22	-	1720	2	FSM	ENSG00000100276.10	ENST00000401450.3	1720	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCGCCTGGGATTTCTGGG	-29315587	True	NA	1	True	AATAAA	-17	NA	29315692	29312932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_29313988_29315027
transcript_136424.known	chr22	-	4165	23	FSM	ENSG00000100280.17	ENST00000357586.7	4165	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	158.538345597503	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTCCCCAGCCAGTGTG	-29381383	True	NA	-1	True	AATAAA	-15	NA	29388570	29327679	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_29328896_29329711_29329721_29330377_29330533_29330622_29330710_29331448_29331534_29331786_29331917_29334264_29334411_29338989_29339134_29339753_29339775_29340655_29340858_29341500_29341761_29342284_29342384_29349217_29349384_29350034_29350151_29351170_29351267_29351704_29351826_29354649_29354872_29356425_29356617_29358725_29358972_29359823_29359960_29363000_29363107_29367206_29367271_29388423
transcript_13644.nic	chr1	+	2693	6	NIC	ENSG00000143363.17	novel	2788	7	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	70.9072633797131	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTCTTACTGTCTTTT	NA	False	NA	13	True	ATTAAA	-16	NA	151008392	151035713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_151008672_151017811_151017905_151025514_151025674_151027232_151027328_151028785_151028945_151033805
transcript_136445.known	chr22	-	3903	21	FSM	ENSG00000100280.17	ENST00000317368.11	3903	21	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_6	91.1851276250683	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGGCAATCACGGACACT	-29381396	True	NA	-15	True	AATAAA	-13	NA	29388583	29327864	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_29328896_29330377_29330533_29330622_29330710_29331448_29331534_29331786_29331917_29334264_29334351_29338989_29339134_29340655_29340858_29341500_29341761_29342284_29342384_29349217_29349384_29350034_29350151_29351170_29351267_29351704_29351826_29354649_29354872_29356425_29356617_29358725_29358972_29359823_29359960_29363000_29363107_29367206_29367271_29388423
transcript_136446.known	chr22	-	4146	21	FSM	ENSG00000100280.17	ENST00000432560.6	4146	21	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_9	33.8116474014503	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGTCCCCAGCCAGTG	-29381396	True	NA	-3	True	AATAAA	-13	NA	29388583	29327681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_29328896_29330377_29330533_29330622_29330710_29331448_29331534_29331786_29331917_29334264_29334411_29338989_29339134_29340655_29340858_29341500_29341761_29342284_29342384_29349217_29349384_29350034_29350151_29351170_29351267_29351704_29351826_29354649_29354872_29356425_29356617_29358725_29358972_29359823_29359960_29363000_29363107_29367206_29367271_29388423
transcript_13646.known	chr1	+	825	6	FSM	ENSG00000143363.17	ENST00000450884.5	825	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	65.4473834465519	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTGAAGCTGACCCCTG	151005213	True	NA	NA	False	NA	NA	NA	151008476	151033837	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151008672_151024610_151024796_151025514_151025674_151027232_151027328_151028785_151028945_151033805
transcript_136492.known	chr22	-	560	4	FSM	ENSG00000100280.17	ENST00000473606.1	560	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	191.426806435834	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGCTCCCACTCTCCAGA	-29381342	True	NA	NA	False	NA	NA	NA	29388529	29359672	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_29359960_29363000_29363107_29367206_29367268_29388423
transcript_136494.known	chr22	+	3795	4	FSM	ENSG00000100285.10	ENST00000310624.7	3795	4	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_3	3.74165738677394	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTCGTGGGTCTAGAGCG	29480135	True	NA	NA	False	NA	NA	NA	29480217	29491390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29481146_29483374_29483575_29485722_29485848_29488848
transcript_1365.known	chr1	-	3048	10	FSM	ENSG00000078369.18	ENST00000615252.4	3048	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	817.886043557972	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTGGTGATTATTTA	-1863123	True	NA	0	True	AATAAA	-20	NA	1891117	1785284	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1787054_1787321_1787438_1789052_1789270_1790394_1790597_1793244_1793312_1804418_1804582_1806474_1806539_1825396_1825500_1839189_1839239_1890819
transcript_136504.known	chr22	-	2676	21	FSM	ENSG00000100296.14	ENST00000397872.5	2676	21	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_20	62.3869176991459	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTTGTCTACGCACACC	-29547993	True	NA	-2	True	AATAAA	-42	NA	29553655	29508167	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_29508521_29511105_29511297_29512020_29512137_29517028_29517117_29517262_29517367_29519005_29519121_29520007_29520105_29520997_29521100_29525837_29525947_29528077_29528178_29528425_29528467_29529161_29529240_29531830_29531964_29536623_29536739_29539329_29539477_29542858_29542957_29543428_29543543_29544459_29544604_29549051_29549159_29550727_29550844_29553447
transcript_136508.known	chr22	-	2560	20	FSM	ENSG00000100296.14	ENST00000397871.5	2560	20	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_19	47.0848823889843	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTTGTCTACGCACACC	-29547993	True	NA	-2	True	AATAAA	-42	NA	29553655	29508167	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_29508521_29511105_29511297_29512020_29512137_29517028_29517117_29517262_29517367_29519005_29519121_29520007_29520105_29520997_29521100_29525837_29525947_29528077_29528178_29528425_29528467_29529161_29529240_29531830_29531964_29536623_29536739_29539329_29539477_29542858_29542957_29543428_29543543_29544459_29544604_29549051_29549159_29553447
transcript_136509.known	chr22	-	4728	20	FSM	ENSG00000100296.14	ENST00000490103.6	4728	20	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_19	47.0848823889843	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGATGTAG	-29548095	True	NA	NA	False	NA	NA	NA	29553757	29505878	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_29508521_29511105_29511297_29512020_29512137_29517028_29517117_29517262_29517367_29519005_29519121_29520007_29520105_29520997_29521100_29525837_29525947_29528077_29528178_29528425_29528467_29529161_29529240_29531830_29531964_29536623_29536739_29539329_29539477_29542858_29542957_29543428_29543543_29544459_29544604_29549051_29549159_29553670
transcript_13652.known	chr1	+	845	5	FSM	ENSG00000143363.17	ENST00000431193.5	845	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	88.5593021652723	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGGATGAGTGCCCTC	151005218	True	NA	NA	False	NA	NA	NA	151008481	151034113	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151008672_151017811_151017905_151025514_151025674_151027232_151027328_151033805
transcript_13653.nic	chr1	+	2534	5	NIC	ENSG00000143363.17	novel	2788	7	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_2	68.7509090848987	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTCTTACTGTCTTTT	NA	False	NA	13	True	ATTAAA	-16	NA	151008392	151035713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_151008672_151017811_151017905_151027232_151027328_151028785_151028945_151033805
transcript_136532.known	chr22	-	2013	10	FSM	ENSG00000184117.12	ENST00000216121.12	2013	10	0	0	0	0	multi-exon	FALSE	canonical	3	1906	junction_4	181.135921954267	1695	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGTCTTTTCTTCATCT	-29565315	True	NA	NA	False	ATTAAA	-14	NA	29581113	29554807	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_29556000_29558869_29558954_29560733_29560829_29561170_29561203_29561505_29561647_29561791_29561863_29569192_29569288_29570161_29570208_29570404_29570533_29580984
transcript_136549.known	chr22	-	2374	21	FSM	ENSG00000100296.14	ENST00000397873.6	2374	21	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_20	65.2869818570287	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACCAGCCAATTAAAAAGC	-29553748	False	NA	-52	True	NA	NA	NA	29553766	29508357	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_29508521_29511105_29511297_29512020_29512137_29517028_29517117_29517262_29517367_29519005_29519121_29520007_29520105_29520997_29521100_29525837_29525947_29528077_29528178_29528425_29528467_29529161_29529240_29531830_29531964_29536623_29536739_29539329_29539477_29542858_29542957_29543428_29543543_29544459_29544604_29549051_29549159_29550727_29550844_29553670
transcript_136550.known	chr22	+	1857	17	FSM	ENSG00000186575.19	ENST00000397789.3	1857	17	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_16	34.5212230917446	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCACCCCAGGACCTGCC	29603983	False	NA	NA	False	NA	NA	NA	29603998	29694811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29604113_29636750_29636877_29639089_29639213_29642201_29642286_29654656_29654726_29655593_29655677_29658188_29658265_29661204_29661340_29664989_29665065_29668332_29668447_29671825_29671949_29673268_29673487_29674835_29674942_29678195_29678324_29681438_29681602_29683019_29683080_29694751
transcript_136554.known	chr22	+	5950	16	FSM	ENSG00000186575.19	ENST00000338641.10	5950	16	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_15	26.7179506865495	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTGCCTTGGGCTTCCTC	29598528	True	NA	16	True	AATAAA	-18	NA	29603632	29698598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29604113_29636750_29636877_29639089_29639213_29642201_29642286_29654656_29654726_29655593_29655677_29658188_29658265_29661204_29661340_29664989_29665065_29668332_29668447_29671825_29671949_29673268_29673487_29674835_29674942_29678195_29678324_29681438_29681602_29694751
transcript_136559.known	chr22	+	5884	16	FSM	ENSG00000186575.19	ENST00000361452.8	5884	16	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	33.9565735740355	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATACTTGCCTTGGGCTT	29598512	True	NA	12	True	AATAAA	-14	NA	29603616	29698594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29604113_29636750_29636877_29642201_29642286_29654656_29654726_29655593_29655677_29658188_29658265_29661204_29661340_29664989_29665065_29668332_29668447_29671825_29671949_29673268_29673487_29674835_29674942_29678195_29678324_29681438_29681602_29683019_29683065_29694751
transcript_13656.known	chr1	+	2238	4	FSM	ENSG00000143363.17	ENST00000368935.1	2238	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	84.9745059807156	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTCTTACTGTCTTTT	151005266	True	NA	13	True	ATTAAA	-16	NA	151008529	151035713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151008672_151017811_151017905_151027232_151027328_151033805
transcript_136563.known	chr22	+	1845	15	FSM	ENSG00000186575.19	ENST00000353887.8	1845	15	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	36.5493795139828	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCACCCCAGGACCTGCC	29598642	False	NA	NA	False	NA	NA	NA	29603746	29694811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29604113_29642201_29642286_29654656_29654726_29655593_29655677_29658188_29658265_29661204_29661340_29664989_29665065_29668332_29668447_29671825_29671949_29673268_29673487_29674835_29674942_29678195_29678324_29681438_29681602_29683019_29683065_29694751
transcript_136565.nic	chr22	+	2104	14	ISM	ENSG00000186575.19	ENST00000403999.7	2999	16	-164	5592	-87	-5592	5prime_fragment	TRUE	canonical	3	117	junction_10	12.6523847648057	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTAGCCCCCTGTGCCC	29603453	True	NA	NA	False	AAGAAA	-2	NA	29603468	29678323	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_29604113_29636750_29636877_29639089_29639213_29642201_29642286_29654656_29654726_29655593_29655677_29658188_29658265_29661204_29661340_29664989_29665065_29668332_29668447_29671825_29671949_29673268_29673487_29674835_29674942_29678195
transcript_136573.known	chr22	-	945	6	FSM	ENSG00000100319.13	ENST00000344318.4	945	6	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_5	41.5567082430743	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTCTGGCTGTGTTTCCC	-29765714	True	NA	-23	True	TATAAA	-18	NA	29767007	29730955	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_29731355_29738329_29738442_29740649_29740731_29742417_29742481_29748417_29748572_29766871
transcript_136574.nic	chr22	-	868	6	NIC	ENSG00000100319.13	novel	945	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_5	49.5314041795708	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTCTGGCTGTGTTTCCC	-29765714	True	NA	-23	True	TATAAA	-18	NA	29767007	29730955	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_29731355_29738329_29738442_29740649_29740731_29742417_29742481_29748417_29748572_29766948
transcript_136575.known	chr22	+	916	2	FSM	ENSG00000184076.13	ENST00000330029.6	916	2	0	0	0	0	multi-exon	FALSE	canonical	3	10139	junction_1	0	1613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGGGCCTCATTCAAAG	29712825	True	NA	3	True	AATAAA	-14	NA	29767368	29770413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29767549_29769677
transcript_136576.known	chr22	+	584	2	FSM	ENSG00000184076.13	ENST00000401406.3	584	2	0	0	0	0	multi-exon	FALSE	canonical	3	1120	junction_1	0	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACACCCCAAAGGCAGAAT	29712830	True	NA	100	True	NA	NA	NA	29767373	29770027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29767608_29769677
transcript_13658.known	chr1	+	2247	10	FSM	ENSG00000163141.20	ENST00000368931.8	2247	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	6.01438604565527	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCACCCCCTTCCCCGCGG	151036511	True	NA	NA	False	NA	NA	NA	151036585	151047720	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151036767_151037566_151037663_151038503_151038569_151038795_151039027_151042955_151043139_151043331_151043435_151043595_151043728_151045796_151045884_151046066_151046166_151046650
transcript_136585.nic	chr22	-	3004	22	NIC	ENSG00000100325.15	novel	2823	21	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_18	110.232181266852	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATCTGTGTATGTCCATGA	-29835485	True	NA	-18	True	AATAAA	-19	NA	29838302	29788610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_29789185_29790468_29790549_29792432_29792536_29793359_29793491_29793576_29793677_29800990_29801111_29801993_29802209_29804637_29804831_29806215_29806291_29806484_29806554_29806796_29806905_29808110_29808186_29813429_29813543_29814656_29814768_29816005_29816074_29822334_29822465_29825086_29825258_29825621_29825781_29827476_29827601_29832244_29832343_29834488_29834551_29838177
transcript_136588.nic	chr22	-	2954	22	NIC	ENSG00000100325.15	novel	2823	21	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_20	101.088789243207	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATCTGTGTATGTCCATGA	-29835485	True	NA	-18	True	AATAAA	-19	NA	29838302	29788610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_29789185_29790468_29790549_29792432_29792536_29793359_29793491_29793576_29793677_29800990_29801111_29801993_29802209_29804637_29804831_29806215_29806291_29806484_29806554_29806796_29806905_29808110_29808186_29813429_29813543_29814656_29814768_29816005_29816074_29822334_29822465_29825086_29825258_29825621_29825781_29832244_29832343_29833540_29833615_29834488_29834551_29838177
transcript_13659.known	chr1	-	1174	6	FSM	ENSG00000197622.13	ENST00000492796.5	1174	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	60.310529760565	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGCTGAAGCTGGCTTT	-151052859	True	NA	NA	False	NA	NA	NA	151059615	151052945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151053328_151054230_151054322_151055015_151055127_151055676_151055994_151056650_151056787_151059478
transcript_136599.nic	chr22	-	2927	21	NIC	ENSG00000100325.15	novel	2823	21	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_19	86.1703400248601	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATCTGTGTATGTCCATGA	-29835485	True	NA	-18	True	AATAAA	-19	NA	29838302	29788610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_29789185_29790468_29790549_29792432_29792536_29793359_29793491_29793576_29793677_29800990_29801111_29801993_29802209_29804637_29804831_29806215_29806291_29806484_29806554_29806796_29806905_29808110_29808186_29813429_29813543_29814656_29814768_29816005_29816074_29822334_29822465_29825086_29825258_29825621_29825781_29832244_29832343_29834441_29834551_29838177
transcript_1366.known	chr1	-	935	5	FSM	ENSG00000178821.13	ENST00000310991.8	935	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	25.7147817412476	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGCCTATGTGGGAAGG	-1919266	False	NA	-9	True	AATAAA	-17	NA	1919279	1917590	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1918163_1918252_1918432_1918892_1918935_1919044_1919089_1919181
transcript_136601.known	chr22	-	2823	21	FSM	ENSG00000100325.15	ENST00000397771.6	2823	21	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_19	70.0969863831534	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGCTAATAAAATTTTTG	-29835459	True	NA	-49	True	AAAAAG	-1	NA	29838276	29788641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_29789185_29790468_29790549_29792432_29792536_29793359_29793491_29793576_29793677_29800990_29801111_29801993_29802209_29804637_29804831_29806215_29806291_29806484_29806554_29806796_29806905_29808110_29808186_29813429_29813543_29814656_29814768_29816005_29816074_29822334_29822465_29825086_29825258_29825621_29825781_29832244_29832343_29834488_29834551_29838177
transcript_136613.known	chr22	-	2790	20	FSM	ENSG00000100325.15	ENST00000307790.8	2790	20	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_19	51.9259540994797	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATCTGTGTATGTCCATGA	-29835457	True	NA	-18	True	AATAAA	-19	NA	29838274	29788610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_29789185_29790468_29790549_29792432_29792536_29793359_29793491_29793576_29793677_29800990_29801111_29801993_29802209_29804637_29804831_29806215_29806291_29806484_29806554_29806796_29806905_29808110_29808186_29813429_29813543_29814656_29814768_29816005_29816074_29822334_29822465_29825086_29825258_29825621_29825781_29832244_29832343_29838177
transcript_136619.nnic	chr22	-	2723	19	NIC	ENSG00000100325.15	novel	2790	20	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_18	78.4678317355842	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATCTGTGTATGTCCATGA	-29835488	True	NA	-18	True	AATAAA	-19	NA	29838305	29788610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_29789185_29790468_29790549_29792432_29792536_29793359_29793491_29793576_29793677_29800990_29801111_29801993_29802209_29804637_29804831_29806215_29806291_29806484_29806554_29806796_29806905_29808110_29808186_29813429_29813543_29814656_29814768_29816005_29816074_29822334_29822465_29825086_29825258_29825621_29825781_29838177
transcript_136620.nic	chr22	-	2661	19	NIC	ENSG00000100325.15	novel	2790	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_17	88.5108105275673	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATCTGTGTATGTCCATGA	-29835487	True	NA	-18	True	AATAAA	-19	NA	29838304	29788610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_29789185_29790468_29790549_29792432_29792536_29793359_29793491_29793576_29793677_29800990_29801111_29801993_29802209_29804637_29804831_29806215_29806291_29806484_29806554_29806796_29806905_29808110_29808186_29813429_29813543_29814656_29814768_29816005_29816074_29822334_29822465_29825086_29825258_29832244_29832343_29838177
transcript_13663.known	chr1	-	3006	5	FSM	ENSG00000197622.13	ENST00000357235.6	3006	5	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_3	11.4755174175285	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTGCACAGTAATCATTG	-151052866	True	NA	-16	True	AATAAA	-14	NA	151059622	151050984	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151053328_151054230_151054322_151055015_151055127_151055676_151055994_151059478
transcript_136634.known	chr22	-	562	2	FSM	ENSG00000100325.15	ENST00000492821.1	562	2	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTTTGTGAGCATTAAT	-29835457	True	NA	NA	False	GATAAA	-28	NA	29838274	29834085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_29834551_29838177
transcript_136636.known	chr22	+	8987	20	FSM	ENSG00000100330.16	ENST00000401950.7	8987	20	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_17	10.5310515662688	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAATCTCCTCCTTTTTCA	29880778	True	NA	12	True	AATAAA	-19	NA	29883173	30030868	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29883360_29957035_29957089_29970975_29971063_29978441_29978532_29978935_29979053_29988479_29988563_29991503_29991671_29998760_29998858_30002879_30002994_30007113_30007320_30007900_30008033_30009017_30009130_30012367_30012564_30013355_30013542_30016527_30016699_30017926_30018073_30019479_30020885_30022028_30022140_30022608_30022698_30025629
transcript_136637.known	chr22	+	8906	20	FSM	ENSG00000100330.16	ENST00000333027.7	8906	20	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_17	17.8280491131266	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCAATCTCCTCCTTTTT	29880773	True	NA	10	True	AATAAA	-17	NA	29883168	30030866	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29883360_29957035_29957089_29970975_29971063_29978441_29978532_29978935_29979053_29988479_29988563_29991503_29991671_29998760_29998858_30002879_30002994_30007113_30007320_30007900_30008033_30009017_30009130_30012367_30012564_30013355_30013542_30016527_30016699_30017926_30018073_30019479_30020885_30022608_30022698_30023456_30023484_30025629
transcript_136638.known	chr22	+	4464	19	FSM	ENSG00000100330.16	ENST00000351488.7	4464	19	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_17	14.3015366523071	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCCCCCGTGGGATCCCA	29880817	True	NA	NA	False	GGGGCT	-21	NA	29883212	30026495	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_29883360_29957035_29957089_29970975_29971063_29978441_29978532_29978935_29979053_29988479_29988563_29991503_29991671_29998760_29998858_30002879_30002994_30007113_30007320_30007900_30008033_30009017_30009130_30012367_30012564_30013355_30013542_30016527_30016699_30017926_30018073_30019479_30020885_30022608_30022698_30025629
transcript_136641.known	chr22	-	902	5	FSM	ENSG00000227117.6	ENST00000429350.5	902	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	1.58113883008419	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCGATCTCACTCTGGC	-30080133	True	NA	NA	False	AATAAA	-27	NA	30080230	30008741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_30009197_30018616_30018730_30040176_30040279_30050460_30050590_30080127
transcript_136645.nnic	chr22	-	4258	3	NNC	ENSG00000128342.5	novel	3871	3	NA	NA	102	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	2	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCTCTCCGGAGTGTAC	NA	False	NA	NA	False	AATAAA	-14	NA	30246637	30240452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_30244062_30244754_30244934_30246167
transcript_136648.known	chr22	-	1501	9	FSM	ENSG00000239282.8	ENST00000407689.8	1501	9	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_6	13.6633634219397	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTGGGCTACGGTCCTT	-30288357	True	NA	-2	True	AATAAA	-16	NA	30289505	30285116	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_30285689_30285831_30285927_30286015_30286099_30286262_30286377_30286824_30286949_30287154_30287288_30287372_30287561_30288705_30288777_30289384
transcript_136650.known	chr22	-	1972	9	FSM	ENSG00000099992.16	ENST00000215790.12	1972	9	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	9.49670995661129	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCGTGTACAGCTAGGGGC	-30326279	True	NA	1	True	AATAAA	-17	NA	30326941	30291989	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_30292852_30293650_30293806_30293920_30294111_30294795_30294862_30294940_30295056_30295736_30295844_30299443_30299552_30304530_30304631_30326672
transcript_136651.nic	chr22	-	2800	8	NIC	ENSG00000099992.16	novel	1972	9	NA	NA	-23	0	intron_retention	FALSE	canonical	3	72	junction_6	8.06858356939597	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCGTGTACAGCTAGGGGC	-30326927	False	NA	1	True	AATAAA	-17	NA	30326970	30291989	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_30293806_30293920_30294111_30294795_30294862_30294940_30295056_30295736_30295844_30299443_30299552_30304530_30304631_30326672
transcript_136659.known	chr22	-	5090	16	FSM	ENSG00000099995.19	ENST00000215793.13	5090	16	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_4	123.277464823598	300	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTATGATCATTAACTCT	-30342974	True	NA	-13	True	AATAAA	-21	NA	30356894	30331987	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_30334696_30335466_30335539_30335651_30335754_30337025_30337181_30337689_30337898_30338788_30339035_30339129_30339252_30340195_30340382_30340694_30340813_30341691_30341886_30342199_30342351_30342804_30342880_30344932_30345191_30346311_30346520_30352950_30353073_30356729
transcript_13668.known	chr1	-	2379	4	FSM	ENSG00000197622.13	ENST00000483763.5	2379	4	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_3	9.56846672960488	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCAAGATATTTTTCTC	-151052818	True	NA	NA	False	NA	NA	NA	151059574	151052113	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151053328_151054230_151054322_151055015_151055994_151059478
transcript_136683.known	chr22	+	4478	12	FSM	ENSG00000187860.11	ENST00000338306.8	4478	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_7	12.6334201934838	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTCCAGAAATTATATTAAT	30356768	True	NA	NA	False	AATAAA	-36	NA	30357006	30378673	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_30357133_30361960_30362115_30365989_30366249_30369431_30369604_30370325_30370951_30371649_30371728_30372074_30372287_30373596_30373765_30373922_30374092_30375478_30375664_30376258_30376348_30376432
transcript_136685.known	chr22	+	4207	12	FSM	ENSG00000100003.18	ENST00000615189.5	4207	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	5.44544695704434	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCGGAACCATCCTAGGG	30396796	True	NA	NA	False	AATAAA	-29	NA	30397017	30425303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_30397171_30399642_30399719_30406341_30406386_30407094_30407155_30407414_30407604_30409186_30409283_30409425_30409487_30410595_30410680_30415758_30415866_30415947_30416088_30416233_30416404_30422276
transcript_136703.known	chr22	+	1759	3	FSM	ENSG00000187860.11	ENST00000399824.6	1759	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	2.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTTGGCACGGTGGCTG	30356328	True	NA	NA	False	AATAAA	-17	NA	30356634	30367096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_30357133_30361960_30362115_30365989
transcript_136705.known	chr22	+	1133	4	FSM	ENSG00000242114.6	ENST00000266263.10	1133	4	0	0	0	0	multi-exon	FALSE	canonical	3	675	junction_2	84.9365776460426	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGTCTTCATTTCTGTT	30416561	True	NA	33	True	AATAAA	-14	NA	30425767	30429054	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_30425947_30426716_30426845_30427170_30427404_30428461
transcript_136706.known	chr22	+	891	3	FSM	ENSG00000242114.6	ENST00000355143.8	891	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	408.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTATGTCTTCATTTCTGT	30416569	True	NA	32	True	AATAAA	-13	NA	30425775	30429053	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_30425947_30426716_30426845_30428461
transcript_136709.known	chr22	-	2510	12	FSM	ENSG00000133488.15	ENST00000255858.12	2510	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.55840859626733	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAATGGCTGCG	-30505510	True	NA	NA	False	NA	NA	NA	30505695	30488901	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_30490247_30491572_30491743_30491833_30491974_30492048_30492156_30492473_30492558_30494149_30494211_30494865_30494962_30495253_30495443_30495582_30495643_30495927_30495972_30503676_30503753_30505557
transcript_136722.known	chr22	-	1909	4	FSM	ENSG00000128242.13	ENST00000406361.6	1909	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	37.7094152699296	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCTCAGTGGTGGTGAC	-30574306	True	NA	-2	True	AGTAAA	-27	NA	30574665	30554634	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_30556094_30557261_30557402_30558278_30558389_30574465
transcript_136723.known	chr22	-	533	3	FSM	ENSG00000128242.13	ENST00000427899.5	533	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	2	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCGACCCCGCCCGCTTGT	-30560479	False	294	NA	False	NA	NA	NA	30560773	30555736	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_30556097_30557261_30557402_30560740
transcript_136724.known	chr22	-	1908	3	FSM	ENSG00000128242.13	ENST00000402321.5	1908	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	38.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCTCAGTGGTGGTGAC	-30564774	False	NA	-2	True	AGTAAA	-27	NA	30565133	30554634	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_30556094_30557261_30557402_30564824
transcript_136725.known	chr22	-	851	3	FSM	ENSG00000128242.13	ENST00000431313.5	851	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	20	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGCTGGGAGCTGGAG	-30574152	True	NA	NA	False	NA	NA	NA	30574511	30555431	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_30556097_30557261_30557402_30574465
transcript_136726.known	chr22	-	1791	4	FSM	ENSG00000128242.13	ENST00000401975.5	1791	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	41.2660743091573	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAGCCTCAGTGGTGGTG	-30564530	False	359	-4	True	AGTAAA	-25	NA	30564889	30554636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_30556094_30557261_30557402_30558259_30558389_30564824
transcript_13673.known	chr1	+	2085	2	FSM	ENSG00000143443.10	ENST00000368926.6	2085	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTCAGTCACTGTTCTG	151047332	True	NA	NA	False	AATACA	-38	NA	151047750	151051420	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151048853_151050437
transcript_136730.known	chr22	-	2760	17	FSM	ENSG00000100029.18	ENST00000402281.5	2760	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	295.263435077475	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTTGTGTCCATGAGCC	-30607011	True	NA	-4	True	ATTAAA	-23	NA	30607083	30576627	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_30577130_30578836_30578999_30579136_30579304_30579750_30579936_30580052_30580179_30580570_30580702_30581011_30581102_30581333_30581409_30581527_30581645_30584364_30584455_30584545_30584718_30587285_30587396_30588020_30588175_30589190_30589271_30592131_30592399_30605460_30605518_30606808
transcript_136743.known	chr22	-	1988	15	FSM	ENSG00000100029.18	ENST00000335214.8	1988	15	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_6	185.754226474288	5083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTGTGCCCAGCCTGAT	-30581654	True	NA	NA	False	NA	NA	NA	30591858	30576834	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_30577130_30578836_30578999_30579136_30579304_30579750_30579936_30580052_30580179_30580570_30580687_30581011_30581102_30581333_30581409_30581527_30581645_30584364_30584455_30584545_30584718_30587285_30587396_30588020_30588175_30589190_30589271_30591809
transcript_136744.known	chr22	-	2144	15	FSM	ENSG00000100029.18	ENST00000402284.7	2144	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_9	204.106564803581	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTTGTTATTAAATGACT	-30581676	True	NA	-41	True	NA	NA	NA	30591880	30576664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_30577130_30578836_30578999_30579136_30579304_30579750_30579936_30580052_30580179_30580570_30580702_30581011_30581102_30581333_30581409_30581527_30581645_30584415_30584455_30584545_30584718_30587285_30587396_30588020_30588175_30589190_30589271_30591809
transcript_13675.known	chr1	+	2483	2	FSM	ENSG00000213190.4	ENST00000368921.5	2483	2	0	0	0	0	multi-exon	FALSE	canonical	3	832	junction_1	0	300	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCAAACTCATGCTCCAT	151051541	True	NA	NA	False	AATAAA	-14	NA	151060396	151069544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151060554_151067218
transcript_136794.known	chr22	+	1870	9	FSM	ENSG00000185339.9	ENST00000407817.3	1870	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	103.921845634111	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTGGCCTGGTGCCTCA	30604483	True	NA	24	True	ATTAAA	-24	NA	30607203	30627060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_30607396_30610870_30611064_30612872_30612962_30614348_30614502_30615300_30615474_30615600_30615788_30617329_30617496_30622967_30623084_30626459
transcript_136796.known	chr22	+	2192	9	FSM	ENSG00000185339.9	ENST00000215838.8	2192	9	0	0	0	0	multi-exon	TRUE	canonical	3	298	junction_7	28.3989436423259	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGAGGTTGTTGATATT	30604453	True	NA	20	True	NA	NA	NA	30607173	30627271	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_30607396_30610870_30611064_30612872_30613043_30614348_30614502_30615300_30615474_30615600_30615788_30617329_30617496_30622967_30623084_30626459
transcript_1368.known	chr1	-	690	4	FSM	ENSG00000178821.13	ENST00000470931.2	690	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	27.5801861245835	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGAGTCGGGCCCCAATA	-1919164	True	NA	NA	False	NA	NA	NA	1919270	1917936	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1918163_1918252_1918432_1918892_1919089_1919181
transcript_13680.known	chr1	-	3873	19	FSM	ENSG00000143434.17	ENST00000368914.8	3873	19	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_18	11.4202819363697	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGAAGTTCCACATCAGAA	-151145287	True	NA	-18	True	AATAAA	-22	NA	151146631	151131706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151133518_151134400_151134446_151134619_151134676_151134797_151134876_151135162_151135310_151135590_151135765_151136010_151136164_151136447_151136580_151136856_151137075_151137710_151137800_151137985_151138106_151138315_151138407_151138629_151138732_151139424_151139482_151139637_151139702_151139975_151140091_151142503_151142676_151144384_151144435_151146432
transcript_136808.known	chr22	-	713	4	FSM	ENSG00000100029.18	ENST00000466614.1	713	4	0	0	0	0	multi-exon	FALSE	canonical	3	824	junction_1	12.0277457017791	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGGCTCCATGAAGGCAC	-30581686	True	NA	NA	False	NA	NA	NA	30591890	30586997	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_30587396_30588020_30588175_30589190_30589271_30591809
transcript_136812.known	chr22	-	1157	3	FSM	ENSG00000167065.14	ENST00000342474.4	1157	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	3.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCACATGGTCAGTTCCCC	-30667593	True	NA	NA	False	NA	NA	NA	30667885	30663514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_30664081_30664954_30665122_30667461
transcript_136818.known	chr22	-	657	2	FSM	ENSG00000167065.14	ENST00000442752.1	657	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCGGCAGCCCTCAGTCAG	-30667061	False	NA	NA	False	NA	NA	NA	30667353	30663970	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_30664081_30666806
transcript_136819.known	chr22	-	3050	2	FSM	ENSG00000167065.14	ENST00000334679.4	3050	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAAAAGAAAAAAAG	-30667583	True	NA	NA	False	AAAAAG	-16	NA	30667875	30661444	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_30664081_30667461
transcript_136820.known	chr22	+	2585	2	FSM	ENSG00000100036.13	ENST00000343605.5	2585	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGTCATTTGTTGGT	30635145	True	NA	3	True	AATACA	-16	NA	30635780	30647893	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_30637070_30646597
transcript_136821.known	chr22	+	2836	14	FSM	ENSG00000184792.16	ENST00000446658.6	2836	14	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_5	5.01713041819087	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTACTGAATGGTCTTTC	30694656	True	NA	NA	False	AATACA	-45	NA	30694888	30906406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_30695554_30741160_30741370_30870428_30870683_30887425_30887619_30888222_30888341_30889179_30889235_30889489_30889637_30890727_30890974_30893121_30893243_30893462_30893567_30893637_30893734_30893816_30894002_30905836_30906070_30906196
transcript_13683.nnic	chr1	-	3400	19	NNC	ENSG00000143434.17	novel	3873	19	NA	NA	-75	11	intron_retention	FALSE	canonical	0	0	junction_18	12.9137690895712	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTGCCTGACTTCACTC	-151145362	True	NA	-5	True	AATACA	-13	NA	151146706	151132055	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_151133319_151134400_151134446_151134619_151134676_151134797_151134876_151135162_151135310_151135590_151135765_151136010_151136164_151136447_151136580_151136856_151137075_151137710_151137800_151137985_151138106_151138315_151138407_151138629_151138732_151139424_151139482_151139637_151139702_151139975_151140091_151142503_151142676_151144384_151144435_151146432
transcript_136831.known	chr22	-	5657	26	FSM	ENSG00000133422.14	ENST00000397641.8	5657	26	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_13	24.6253203024854	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTCTGTTTTCTTAGTA	-30968753	False	57	0	True	TATAAA	-24	NA	30968774	30925129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_30926872_30928018_30928208_30932358_30932453_30932544_30932770_30932888_30933031_30933465_30933521_30934059_30934192_30934780_30935162_30935247_30935323_30936510_30936644_30936931_30937038_30937582_30937712_30937814_30937970_30938064_30938206_30939620_30939707_30939958_30940042_30940757_30940838_30941432_30941559_30941890_30942003_30942111_30942272_30946340_30946450_30949751_30949843_30950376_30950446_30956762_30956798_30958640_30958695_30967821
transcript_136832.nnic	chr22	-	4510	26	NNC	ENSG00000133422.14	novel	5657	26	NA	NA	-310	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_23	64.4590536697523	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTGTGCCTGTGAGACC	-30959049	True	NA	-15	True	TATAAA	-20	NA	30969084	30926610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_30926872_30928018_30928208_30932358_30932453_30932544_30932770_30932888_30933031_30933465_30933521_30934059_30934192_30934780_30935162_30935247_30935323_30936510_30936644_30936931_30937038_30937582_30937712_30937814_30937970_30938064_30938206_30939620_30939707_30939958_30940042_30940757_30940838_30941432_30941559_30941890_30942003_30942111_30942272_30946340_30946450_30949751_30949843_30950376_30950470_30956762_30956798_30958640_30958695_30967821
transcript_136834.nnic	chr22	-	4360	25	NIC	ENSG00000133422.14	novel	5657	26	NA	NA	-310	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_17	65.2011311251576	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTGTGCCTGTGAGACC	-30959049	True	NA	-15	True	TATAAA	-20	NA	30969084	30926610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_30926872_30928018_30928208_30932358_30932453_30932544_30932770_30932888_30933031_30933465_30933521_30934059_30934192_30934780_30935162_30935247_30935323_30936510_30936644_30936931_30937038_30937582_30937712_30937814_30937970_30938064_30938206_30939620_30939707_30939958_30940042_30940757_30940838_30941890_30942003_30942111_30942272_30946340_30946450_30949751_30949843_30950376_30950446_30956762_30956798_30958640_30958695_30967821
transcript_136845.nic	chr22	+	2306	4	NIC	ENSG00000253352.10	novel	3308	3	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	56.1664193862015	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GCTTTAAAAAAAAAAAAAAA	30965025	True	NA	51	True	GATAAA	-12	NA	30969231	30976058	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_30969387_30971250_30971780_30972854_30973588_30975169
transcript_136849.known	chr22	+	4752	4	FSM	ENSG00000253352.10	ENST00000643077.1	4752	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	72.8422954058972	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATGGAGAGACTTGAAT	30971427	False	NA	NA	False	AATGAA	-26	NA	30971438	30978722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_30971780_30972047_30972173_30972854_30973588_30975169
transcript_136850.known	chr22	+	2110	4	FSM	ENSG00000253352.10	ENST00000521091.6	2110	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	43.7442059655397	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	30971355	False	NA	56	True	GATAAA	-17	NA	30971366	30976063	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_30971780_30972047_30972173_30972923_30973602_30975169
transcript_136851.known	chr22	+	5017	4	FSM	ENSG00000253352.10	ENST00000519077.4	5017	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	58.8047617119566	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGAGTTGGGTTTCTGT	30969325	True	NA	21	True	AATAAA	-21	NA	30969471	30978848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_30969534_30971250_30971780_30972854_30973602_30975169
transcript_136855.known	chr22	+	5875	3	FSM	ENSG00000253352.10	ENST00000647354.1	5875	3	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_2	22.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAATAAATACCCTTTTTT	30970287	False	NA	-8	True	NA	NA	NA	30970301	30978819	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_30971780_30972854_30973602_30975169
transcript_136856.known	chr22	+	6154	3	FSM	ENSG00000253352.10	ENST00000643071.1	6154	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	22	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATACCCTTTTTTGCTTA	30969946	False	NA	-3	True	NA	NA	NA	30969958	30978824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_30971780_30972923_30973602_30975169
transcript_136858.known	chr22	+	4207	2	FSM	ENSG00000253352.10	ENST00000569149.2	4207	2	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATAAATGAGCTAATAAG	30970742	False	NA	32	True	NA	NA	NA	30970757	30976039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_30971780_30972854
transcript_136860.known	chr22	+	1817	4	FSM	ENSG00000253352.10	ENST00000602971.2	1817	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	42.3425186885344	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAACTACTGTTTCCAAG	30965088	True	NA	15	True	NA	NA	NA	30969294	30976022	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_30969387_30972047_30972173_30972854_30973602_30975169
transcript_136868.known	chr22	+	3296	21	FSM	ENSG00000183963.19	ENST00000333137.12	3296	21	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_7	17.3637553541853	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTCCTCTCTGCGTC	31080076	True	NA	21	True	GATAAA	-18	NA	31081317	31104624	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31081457_31083178_31083310_31087964_31088114_31088512_31088607_31088698_31088778_31088871_31088970_31089698_31090020_31090107_31090181_31090807_31090880_31090960_31091483_31091674_31091848_31095302_31095456_31095533_31095610_31096732_31096898_31096997_31097061_31097268_31097339_31098666_31098841_31099061_31099180_31099744_31099897_31100884_31101050_31104315
transcript_136869.known	chr22	+	3560	20	FSM	ENSG00000183963.19	ENST00000489337.5	3560	20	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	22.6527440811137	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGACTCCTCTCTGCGT	31080078	True	NA	20	True	GATAAA	-17	NA	31081319	31104623	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31081457_31083178_31083310_31087964_31088114_31088453_31088607_31088698_31088778_31088871_31088970_31089698_31090020_31090107_31090181_31090807_31090880_31090960_31091483_31091674_31091848_31095302_31095456_31095533_31095610_31096732_31096898_31096997_31097339_31098666_31098841_31099061_31099180_31099744_31099897_31100884_31101050_31104315
transcript_136870.known	chr22	+	3130	20	FSM	ENSG00000183963.19	ENST00000347557.6	3130	20	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_19	16.4503786718955	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTCCTCTCTGCGTC	31080077	True	NA	21	True	GATAAA	-18	NA	31081318	31104624	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31081457_31083178_31083310_31087964_31088114_31088512_31088607_31088698_31088778_31088871_31088970_31089698_31090020_31090107_31090181_31090807_31090880_31090960_31091483_31091674_31091848_31095302_31095456_31095533_31095610_31096732_31096898_31096997_31097061_31097268_31097339_31098666_31098841_31099061_31099180_31099744_31099897_31104315
transcript_136877.known	chr22	+	3321	20	FSM	ENSG00000183963.19	ENST00000612341.4	3321	20	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	22.3449412371563	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGACTCCTCTCTGCGT	31084900	True	NA	20	True	GATAAA	-17	NA	31084995	31104623	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31085292_31087964_31088114_31088512_31088607_31088698_31088778_31088871_31088970_31089698_31090020_31090107_31090181_31090807_31090880_31090960_31091483_31091674_31091848_31095302_31095456_31095533_31095610_31096732_31096898_31096997_31097061_31097268_31097339_31098666_31098841_31099061_31099180_31099744_31099897_31100884_31101050_31104315
transcript_136891.known	chr22	-	694	5	FSM	ENSG00000198832.11	ENST00000400299.6	694	5	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_4	10.917302780449	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGCTCGACTCCTTCGT	-31104306	True	NA	-5	True	ACTAAA	-17	NA	31107568	31104776	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_31105129_31105207_31105287_31105657_31105693_31105929_31105966_31107376
transcript_136892.known	chr22	-	605	5	FSM	ENSG00000198832.11	ENST00000491958.5	605	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	115.243221058768	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGAAACTTCGGACCACG	-31104291	True	NA	NA	False	NA	NA	NA	31107553	31105000	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_31105129_31105207_31105287_31105657_31105693_31105929_31106116_31107376
transcript_136893.known	chr22	-	334	4	FSM	ENSG00000198832.11	ENST00000469262.1	334	4	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_3	12.3558353285671	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGACCCGCGAAGAGAT	-31104204	False	NA	NA	False	NA	NA	NA	31107466	31105113	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_31105287_31105657_31105693_31105929_31105966_31107376
transcript_136894.known	chr22	+	3512	14	FSM	ENSG00000185133.14	ENST00000412277.6	3512	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	19.5823250821066	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTCGGCTCTTTCCTACT	NA	False	NA	13	True	ATTAAA	-13	NA	31122922	31134696	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31123120_31124141_31124264_31124844_31126011_31126375_31126490_31126612_31126722_31126920_31127038_31127356_31127533_31127950_31128063_31128213_31128324_31128470_31128655_31133097_31133236_31133405_31133484_31133609_31133715_31133912
transcript_136897.known	chr22	+	3348	13	FSM	ENSG00000185133.14	ENST00000331075.10	3348	13	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_4	16.5653168464181	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCGGCTCTTTCCTACTT	31122453	True	NA	14	True	ATTAAA	-14	NA	31122965	31134697	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31123120_31124844_31126011_31126375_31126490_31126612_31126722_31126920_31127038_31127356_31127533_31127950_31128063_31128213_31128324_31128470_31128655_31133097_31133236_31133405_31133484_31133609_31133715_31133912
transcript_136898.known	chr22	+	2215	13	FSM	ENSG00000185133.14	ENST00000404390.7	2215	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	17.9325510981815	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTCGGCTCTTTCCTACT	31122481	True	NA	13	True	ATTAAA	-13	NA	31122993	31134696	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31123120_31124844_31124907_31126375_31126490_31126612_31126722_31126920_31127038_31127356_31127533_31127950_31128063_31128213_31128324_31128470_31128655_31133097_31133236_31133405_31133484_31133609_31133715_31133912
transcript_136899.known	chr22	+	2393	14	FSM	ENSG00000185133.14	ENST00000400294.6	2393	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	18.4580124837988	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTCGGCTCTTTCCTACT	31122481	True	NA	13	True	ATTAAA	-13	NA	31122993	31134696	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31123120_31124844_31124907_31125832_31126011_31126375_31126490_31126612_31126722_31126920_31127038_31127356_31127533_31127950_31128063_31128213_31128324_31128470_31128655_31133097_31133236_31133405_31133484_31133609_31133715_31133912
transcript_1369.known	chr1	-	878	4	FSM	ENSG00000178821.13	ENST00000602604.1	878	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	28.2960539062723	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTCCATGGCTCCTCCTG	-1919163	True	NA	NA	False	NA	NA	NA	1919269	1918098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1918163_1918252_1918935_1919044_1919089_1919181
transcript_136909.known	chr22	-	2600	7	FSM	ENSG00000100078.4	ENST00000215885.4	2600	7	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_5	11.1567119807864	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGCTGGTGCCTGGTAAA	-31139189	True	NA	-7	True	ATTAAA	-22	NA	31140508	31134806	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_31135937_31136682_31136800_31136907_31137041_31137709_31137994_31138275_31138411_31138666_31138800_31139840
transcript_136910.nnic	chr22	-	2954	7	NNC	ENSG00000100078.4	novel	2600	7	NA	NA	-10	0	intron_retention	FALSE	canonical	1	2	junction_5	31.559467676119	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGCTGGTGCCTGGTAAA	-31139199	False	NA	-7	True	ATTAAA	-22	NA	31140518	31134806	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_31135937_31136682_31136800_31136907_31137041_31137709_31137994_31138275_31138800_31138891_31138980_31139840
transcript_136916.nic	chr22	-	2782	6	NIC	ENSG00000100078.4	novel	2600	7	NA	NA	74	0	intron_retention	TRUE	canonical	3	54	junction_4	9.44457516249408	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGCTGGTGCCTGGTAAA	-31139115	True	NA	-7	True	ATTAAA	-22	NA	31140434	31134806	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_31135937_31136682_31136800_31136907_31137041_31137709_31137994_31138275_31138800_31139840
transcript_136918.nnic	chr22	-	2465	6	NIC	ENSG00000100078.4	novel	2600	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_4	24.3195394693238	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGCTGGTGCCTGGTAAA	-31139189	True	NA	-7	True	ATTAAA	-22	NA	31140508	31134806	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_31135937_31136682_31136800_31136907_31137041_31137709_31137994_31138666_31138800_31139840
transcript_136933.nnic	chr22	+	3331	8	NNC	ENSG00000138942.17	novel	3182	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	15	junction_2	60.9178101365827	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATGAGCTTGGACTTCTT	31157784	True	NA	-1	True	ATTAAA	-17	NA	31160181	31207012	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_+_31160304_31176261_31176418_31187046_31187271_31192683_31192703_31195468_31195582_31196935_31196991_31201497_31201616_31204488
transcript_136937.known	chr22	+	3182	7	FSM	ENSG00000138942.17	ENST00000326132.11	3182	7	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_3	7.83156008298049	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGACTTCTTGTCTGTG	31157784	True	NA	6	True	ATTAAA	-24	NA	31160181	31207019	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31160304_31187046_31187271_31192683_31192703_31195468_31195582_31196935_31196991_31201497_31201616_31204488
transcript_136942.nic	chr22	+	3088	6	NIC	ENSG00000138942.17	novel	3182	7	NA	NA	-26	0	intron_retention	FALSE	canonical	3	10	junction_3	55.5539377542222	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATGAGCTTGGACTTCTT	NA	False	NA	-1	True	ATTAAA	-17	NA	31160155	31207012	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_31160304_31187046_31187271_31192683_31192703_31196935_31196991_31201497_31201616_31204488
transcript_136943.nic	chr22	+	2977	6	NIC	ENSG00000138942.17	novel	3182	7	NA	NA	-26	0	intron_retention	FALSE	canonical	3	10	junction_1	55.390973993964	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATGAGCTTGGACTTCTT	NA	False	NA	-1	True	ATTAAA	-17	NA	31160155	31207012	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_31160304_31192683_31192703_31195468_31195582_31196935_31196991_31201497_31201616_31204488
transcript_136946.known	chr22	+	2946	5	FSM	ENSG00000138942.17	ENST00000266252.8	2946	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	63.0530530585157	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATGAGCTTGGACTTCTT	31157845	True	NA	-1	True	ATTAAA	-17	NA	31160242	31207012	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31160304_31187046_31187271_31192683_31192703_31201497_31201616_31204488
transcript_136949.known	chr22	+	3315	7	NNC	ENSG00000138942.17	novel	2737	8	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_5	56.2840020688729	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGAGCTTGGACTTCTTG	31157813	True	NA	0	True	ATTAAA	-18	NA	31160210	31207013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_+_31160304_31187046_31187271_31192683_31192703_31195468_31195582_31196935_31197159_31201497_31201616_31204488
transcript_136957.nic	chr22	+	2482	16	NIC	ENSG00000182541.18	novel	3667	16	NA	NA	16	-294	combination_of_known_junctions	FALSE	canonical	3	29	junction_15	46.1059649069402	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTTTATATTGACTCT	31207660	True	NA	NA	False	ATTAAA	-13	NA	31212254	31277344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_31212425_31225719_31225820_31258290_31258427_31259120_31259231_31259888_31260078_31262133_31262240_31262594_31262792_31265945_31266133_31266983_31267071_31267775_31267908_31268143_31268201_31271135_31271202_31272529_31272705_31273451_31273508_31275150_31275309_31276788
transcript_136958.nic	chr22	+	2646	16	NIC	ENSG00000182541.18	novel	3667	16	NA	NA	-59	-205	combination_of_known_junctions	FALSE	canonical	3	29	junction_15	46.1059649069402	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTCCAGCGGTCCACAT	NA	False	NA	NA	False	NA	NA	NA	31212179	31277433	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_31212425_31225719_31225820_31258290_31258427_31259120_31259231_31259888_31260078_31262133_31262240_31262594_31262792_31265945_31266133_31266983_31267071_31267775_31267908_31268143_31268201_31271135_31271202_31272529_31272705_31273451_31273508_31275150_31275309_31276788
transcript_136959.nic	chr22	+	2776	16	NIC	ENSG00000182541.18	novel	3667	16	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_15	46.1059649069402	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAATGCCTACTGTGTGCT	31207660	True	NA	NA	False	ATTAAA	-19	NA	31212254	31277638	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_31212425_31225719_31225820_31258290_31258427_31259120_31259231_31259888_31260078_31262133_31262240_31262594_31262792_31265945_31266133_31266983_31267071_31267775_31267908_31268143_31268201_31271135_31271202_31272529_31272705_31273451_31273508_31275150_31275309_31276788
transcript_136960.known	chr22	+	3667	16	FSM	ENSG00000182541.18	ENST00000331728.9	3667	16	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_15	25.2222124326951	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGGAGAGTGAAAACATGA	31207703	True	NA	44	True	AATAAA	-25	NA	31212297	31280080	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31212425_31225719_31225820_31258290_31258427_31259120_31259231_31259888_31260078_31262133_31262240_31262594_31262792_31265945_31266133_31266983_31267071_31267775_31267908_31268143_31268201_31271135_31271202_31272529_31272705_31273451_31273508_31275150_31275309_31278296
transcript_136973.known	chr22	+	2657	15	FSM	ENSG00000182541.18	ENST00000406516.5	2657	15	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_14	58.7700899215558	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAATGCCTACTGTGTGCT	31207679	True	NA	NA	False	ATTAAA	-19	NA	31212273	31277638	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31212425_31258290_31258427_31259120_31259231_31259888_31260078_31262133_31262240_31262594_31262792_31265945_31266133_31266983_31267071_31267775_31267908_31268143_31268201_31271135_31271202_31272529_31272705_31273451_31273508_31275150_31275309_31276788
transcript_136976.nic	chr22	+	3330	15	NIC	ENSG00000182541.18	novel	3667	16	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_1	44.4063449226319	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAATGTGTGGTGGTTGTA	NA	False	NA	12	True	AATAAA	-25	NA	31212188	31279734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_31212425_31258290_31258427_31259120_31259231_31259888_31260078_31262133_31262240_31262594_31262792_31265945_31266133_31266983_31267071_31267775_31267908_31268143_31268201_31271135_31271202_31272529_31272705_31273451_31273508_31275150_31275309_31278296
transcript_136977.nic	chr22	+	3676	15	NIC	ENSG00000182541.18	novel	3667	16	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_1	44.4063449226319	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGGAGAGTGAAAACATGA	NA	False	NA	44	True	AATAAA	-25	NA	31212188	31280080	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_31212425_31258290_31258427_31259120_31259231_31259888_31260078_31262133_31262240_31262594_31262792_31265945_31266133_31266983_31267071_31267775_31267908_31268143_31268201_31271135_31271202_31272529_31272705_31273451_31273508_31275150_31275309_31278296
transcript_136978.known	chr22	+	2789	15	FSM	ENSG00000182541.18	ENST00000340552.4	2789	15	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	65.2411539081376	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAATGCCTACTGTGTGCT	31248442	False	NA	NA	False	ATTAAA	-19	NA	31248486	31277638	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31248770_31258290_31258427_31259120_31259231_31259888_31260078_31262133_31262240_31262594_31262792_31265945_31266133_31266983_31267071_31267775_31267908_31268143_31268201_31271135_31271202_31272529_31272705_31273451_31273508_31275150_31275309_31276788
transcript_136979.known	chr22	+	3462	15	FSM	ENSG00000182541.18	ENST00000333611.8	3462	15	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	53.1015584536281	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAATGTGTGGTGGTTGTA	31248357	True	NA	12	True	AATAAA	-25	NA	31248401	31279734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31248770_31258290_31258427_31259120_31259231_31259888_31260078_31262133_31262240_31262594_31262792_31265945_31266133_31266983_31267071_31267775_31267908_31268143_31268201_31271135_31271202_31272529_31272705_31273451_31273508_31275150_31275309_31278296
transcript_13698.nic	chr1	-	2339	18	ISM	ENSG00000143434.17	ENST00000368914.8	3873	19	-75	2492	-75	0	5prime_fragment	FALSE	canonical	0	0	junction_17	11.7470455683451	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCCTTCCCCAGGCCCA	-151145362	True	NA	NA	False	AATAAA	-17	NA	151146706	151134198	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_151134446_151134619_151134676_151134797_151134876_151135162_151135310_151135590_151135765_151136010_151136164_151136447_151136580_151136856_151137075_151137710_151137800_151137985_151138106_151138315_151138407_151138629_151138732_151139424_151139482_151139637_151139702_151139975_151140091_151142503_151142676_151144384_151144435_151146432
transcript_136995.known	chr22	+	1042	3	FSM	ENSG00000182541.18	ENST00000462625.1	1042	3	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_2	4.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCTCACTCCAGCAACAG	31207644	True	NA	NA	False	NA	NA	NA	31212238	31259046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31212425_31225719_31225820_31258290
transcript_136997.known	chr22	-	2420	6	FSM	ENSG00000100100.13	ENST00000215912.10	2420	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	3.24961536185438	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCCACATTGCCAAGTTT	-31292364	True	NA	83	True	ATTAAA	-11	NA	31292488	31281599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_31283289_31289314_31289394_31289498_31289700_31290964_31291085_31291179_31291297_31292274
transcript_13701.known	chr1	+	1913	7	FSM	ENSG00000163156.12	ENST00000368905.9	1913	7	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_1	48.4733603814164	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGATTATCTCTGGCATC	151161290	True	NA	NA	False	AATAAA	-21	NA	151166143	151170296	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151166204_151166470_151166542_151166933_151167023_151167120_151167219_151167325_151167415_151168143_151168339_151168985
transcript_137017.known	chr22	-	2516	3	FSM	ENSG00000100105.18	ENST00000215919.3	2516	3	0	0	0	0	multi-exon	TRUE	canonical	3	95	junction_1	147	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGGCTTTGTGTGTTTT	-31345732	False	879	-4	True	GATAAA	-17	NA	31345776	31340676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_31341684_31342896_31342961_31344331
transcript_137018.known	chr22	+	1943	1	FSM	ENSG00000213888.3	ENST00000504184.3	1943	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTTGCTCTGAGTGTCC	31346488	True	NA	NA	False	AAAAAG	-21	NA	31346776	31348719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31346800_31348700
transcript_137021.known	chr22	+	1665	9	FSM	ENSG00000185721.13	ENST00000331457.9	1665	9	0	0	0	0	multi-exon	FALSE	canonical	3	661	junction_4	48.0414859782667	437	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAACCTATTTTGGGAGAT	31386994	True	NA	NA	False	NA	NA	NA	31399603	31434452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31399726_31400619_31400744_31403028_31403205_31411011_31411082_31420255_31420426_31423279_31423411_31426614_31426783_31427059_31427183_31433871
transcript_137026.known	chr22	+	4031	33	FSM	ENSG00000198089.16	ENST00000400288.7	4031	33	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	30.933838167127	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAGTTGAAAAAATTCAAT	31495141	True	NA	49	True	NA	NA	NA	31496535	31618588	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31496638_31508254_31508377_31528689_31528864_31531057_31531130_31546860_31546972_31550253_31550349_31556941_31557060_31561289_31561393_31573057_31573215_31575230_31575393_31578381_31578453_31580271_31580365_31583874_31583973_31585067_31585135_31589446_31589578_31602211_31602294_31602606_31602786_31603743_31603820_31604308_31604405_31604868_31604946_31606327_31606431_31607936_31608034_31611142_31611304_31611765_31611841_31613141_31613217_31613353_31613531_31613601_31613856_31614788_31614861_31615047_31615280_31616744_31616878_31616999_31617079_31618114_31618227_31618313
transcript_13703.known	chr1	+	869	7	FSM	ENSG00000163156.12	ENST00000368902.1	869	7	0	0	0	0	multi-exon	TRUE	canonical	3	81	junction_1	174.750298044572	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCTTAAGTCTGGTTCC	151161225	True	NA	16	True	AATAAA	-25	NA	151166078	151169138	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151166253_151166470_151166542_151166933_151167023_151167120_151167219_151167325_151167415_151168143_151168339_151168985
transcript_137031.known	chr22	+	4162	32	FSM	ENSG00000198089.16	ENST00000432498.5	4162	32	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	31.9242730403862	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCCCACTTTTCATACAA	31496262	True	NA	12	True	ATTAAA	-18	NA	31496274	31618551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31496638_31508254_31508377_31528689_31528864_31531057_31531130_31546860_31546972_31550253_31550349_31556941_31557060_31561289_31561393_31573057_31573215_31575230_31575393_31578381_31578453_31583874_31583973_31585067_31585135_31589446_31589578_31602211_31602294_31602606_31602786_31603743_31603820_31604308_31604405_31604868_31604946_31606327_31606431_31607936_31608034_31611142_31611304_31611765_31611841_31613141_31613217_31613353_31613531_31613601_31613856_31614788_31614861_31615047_31615280_31616744_31616878_31616999_31617079_31618114_31618227_31618313
transcript_137034.nic	chr22	+	4207	32	NIC	ENSG00000198089.16	novel	4031	33	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_3	26.3572668364618	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTCTCCCACTTTTCAT	31496236	False	NA	8	True	ATTAAA	-14	NA	31496246	31618547	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_31496638_31508254_31508377_31528689_31528864_31546860_31546972_31550253_31550349_31556941_31557060_31561289_31561393_31573057_31573215_31575230_31575393_31578381_31578453_31580271_31580365_31583874_31583973_31585067_31585135_31589446_31589578_31602211_31602294_31602606_31602786_31603743_31603820_31604308_31604405_31604868_31604946_31606327_31606431_31607936_31608034_31611142_31611304_31611765_31611841_31613141_31613217_31613353_31613531_31613601_31613856_31614788_31614861_31615047_31615280_31616744_31616878_31616999_31617079_31618114_31618227_31618313
transcript_137041.known	chr22	+	4226	31	FSM	ENSG00000198089.16	ENST00000540643.5	4226	31	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_10	27.312370009861	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCCCACTTTTCATACAA	31496128	False	NA	12	True	ATTAAA	-18	NA	31496138	31618551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31496638_31508254_31508377_31528689_31528864_31546860_31546972_31550253_31550349_31556941_31557060_31561289_31561393_31573057_31573215_31575230_31575393_31578381_31578453_31583874_31583973_31585067_31585135_31589446_31589578_31602211_31602294_31602606_31602786_31603743_31603820_31604308_31604405_31604868_31604946_31606327_31606431_31607936_31608034_31611142_31611304_31611765_31611841_31613141_31613217_31613353_31613531_31613601_31613856_31614788_31614861_31615047_31615280_31616744_31616878_31616999_31617079_31618114_31618227_31618313
transcript_137043.known	chr22	+	3739	31	FSM	ENSG00000198089.16	ENST00000400289.5	3739	31	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	31.7192720947726	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTCTCCCACTTTTCATA	31495143	True	NA	9	True	ATTAAA	-15	NA	31496537	31618548	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31496638_31508258_31508377_31546860_31546972_31550253_31550349_31556941_31557060_31561289_31561393_31573057_31573215_31575230_31575393_31578381_31578453_31580271_31580365_31583874_31583973_31585067_31585135_31589446_31589578_31602211_31602294_31602606_31602786_31603743_31603820_31604308_31604405_31604868_31604946_31606327_31606431_31607936_31608034_31611142_31611304_31611765_31611841_31613141_31613217_31613353_31613531_31613601_31613856_31614788_31614861_31615047_31615280_31616744_31616878_31616999_31617079_31618114_31618227_31618313
transcript_137059.nic	chr22	+	3757	30	NIC	ENSG00000198089.16	novel	4226	31	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_9	28.5740792043789	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTCTCCCACTTTTCAT	31495035	True	NA	8	True	ATTAAA	-14	NA	31496429	31618547	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_31496638_31508254_31508377_31546860_31546972_31550253_31550349_31556941_31557060_31561289_31561393_31573057_31573215_31575230_31575393_31578381_31578453_31583874_31583973_31585067_31585135_31589446_31589578_31602211_31602294_31602606_31602786_31603743_31603820_31604308_31604405_31604868_31604946_31606327_31606431_31607936_31608034_31611142_31611304_31611765_31611841_31613141_31613217_31613353_31613531_31613601_31613856_31614788_31614861_31615047_31615280_31616744_31616878_31616999_31617079_31618114_31618227_31618313
transcript_13706.known	chr1	+	1094	5	FSM	ENSG00000163156.12	ENST00000461862.5	1094	5	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_1	57.373229820187	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCTAGCCTTTCCCAAAT	151161168	True	NA	NA	False	ATTAAA	-18	NA	151166021	151167979	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151166204_151166470_151166542_151166933_151167023_151167120_151167219_151167325
transcript_13709.known	chr1	-	2462	3	FSM	ENSG00000163155.12	ENST00000368908.10	2462	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	1	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAGTAGTTTTATTTC	-151165034	True	NA	-1	True	ATTAAA	-17	NA	151165902	151159747	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151161021_151161735_151162101_151165078
transcript_1371.known	chr1	-	1118	2	FSM	ENSG00000178821.13	ENST00000378602.3	1118	2	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGCCTATGTGGGAAGGA	-1918784	False	NA	-8	True	AATAAA	-18	NA	1918797	1917589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1918163_1918252
transcript_13710.known	chr1	-	1003	3	FSM	ENSG00000163155.12	ENST00000440902.2	1003	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	12.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCTTAGAACAGGGAAGCA	NA	False	NA	NA	False	NA	NA	NA	151165948	151160584	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151161021_151161735_151162101_151165746
transcript_13713.known	chr1	-	1511	6	FSM	ENSG00000163159.15	ENST00000368892.9	1511	6	0	0	0	0	multi-exon	FALSE	canonical	1	321	junction_5	213.3678513741	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATCCTTGTATTGACCTT	-151182013	True	NA	-3	True	TATAAA	-24	NA	151190197	151176303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151177032_151178000_151178146_151184316_151184494_151185505_151185621_151185797_151185951_151190004
transcript_13715.known	chr1	-	913	6	FSM	ENSG00000163159.15	ENST00000496809.5	913	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	340.801760558833	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCCCTGGGCCCCGGCCC	-151181961	True	NA	-106	True	NA	NA	NA	151190145	151176730	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151177032_151178000_151178146_151184316_151184494_151185505_151185621_151185797_151185951_151190123
transcript_137154.known	chr22	+	1453	5	FSM	ENSG00000198089.16	ENST00000357852.3	1453	5	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_3	5.76085931090146	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTCTCCCACTTTTCATA	NA	False	NA	9	True	ATTAAA	-15	NA	31614385	31618548	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31615280_31616744_31616878_31616999_31617079_31618114_31618227_31618313
transcript_137160.known	chr22	-	3647	19	FSM	ENSG00000184708.18	ENST00000330125.10	3647	19	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_6	30.5089037803154	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGACATTGTTGTGTT	-31488256	True	NA	15	True	ATTAAA	-28	NA	31489842	31439366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_31440122_31440703_31440869_31441773_31442119_31442961_31443095_31444605_31444691_31447425_31447566_31448152_31448233_31449347_31449532_31450288_31450361_31454143_31454377_31455135_31455316_31455851_31455988_31458474_31458651_31462931_31463134_31463680_31463968_31468174_31468303_31471843_31471918_31488622_31488746_31489693
transcript_137164.nic	chr22	-	3677	19	NIC	ENSG00000184708.18	novel	3647	19	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_6	36.5033822211072	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGACATTGTTGTGTT	-31488283	True	NA	15	True	ATTAAA	-28	NA	31489869	31439366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_31440122_31440703_31440869_31441773_31442119_31442961_31443095_31444605_31444691_31447425_31447569_31448152_31448233_31449347_31449532_31450288_31450361_31454143_31454377_31455135_31455316_31455851_31455988_31458474_31458651_31462931_31463134_31463680_31463968_31468174_31468303_31471843_31471918_31488622_31488746_31489693
transcript_13717.nic	chr1	-	2362	5	NIC	ENSG00000163159.15	novel	1347	6	NA	NA	-40	0	intron_retention	FALSE	canonical	1	321	junction_4	235.734357911612	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTGGTGTCCAGTCT	NA	False	NA	-12	True	AATAAA	-14	NA	151190237	151176461	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_151178146_151184316_151184494_151185505_151185621_151185797_151185951_151190004
transcript_137178.nic	chr22	-	1799	10	ISM	ENSG00000184708.18	ENST00000330125.10	3647	19	-27	14693	-27	-9428	5prime_fragment	FALSE	canonical	3	143	junction_1	14.8457085290125	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTGAGTAAGTTGGAAA	-31488283	True	NA	NA	False	AATAAA	-17	NA	31489869	31454059	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_-_31454377_31455135_31455316_31455851_31455988_31458474_31458651_31462931_31463134_31463680_31463968_31468174_31468303_31471843_31471918_31488622_31488746_31489693
transcript_137182.known	chr22	-	3695	19	FSM	ENSG00000184708.18	ENST00000397525.5	3695	19	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_18	44.988887516808	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGACATTGTTGTGTT	-31489562	False	NA	15	True	ATTAAA	-28	NA	31489587	31439366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_31440122_31440703_31440869_31441773_31442119_31442961_31443095_31444605_31444691_31447425_31447566_31448152_31448233_31449347_31449532_31450288_31450361_31454143_31454377_31455135_31455316_31455851_31455988_31458474_31458651_31462931_31463134_31463680_31463968_31468174_31468303_31471843_31471918_31488622_31488746_31489390
transcript_137187.known	chr22	-	1723	8	FSM	ENSG00000241878.12	ENST00000435900.5	1723	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	133.697343248984	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGACCTGATGAGTGACC	-31658571	True	NA	NA	False	NA	NA	NA	31662180	31618976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_31619837_31620552_31620600_31620995_31621143_31621333_31621473_31621648_31621886_31648100_31648277_31650698_31650779_31662143
transcript_137189.known	chr22	-	1963	8	FSM	ENSG00000241878.12	ENST00000439502.7	2358	8	-217	612	-211	-126	multi-exon	FALSE	canonical	3	366	junction_5	31.8331107304252	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACATTCACCTCATCCTG	NA	False	NA	NA	False	NA	NA	NA	31662432	31619102	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_31619837_31620552_31620714_31620995_31621143_31621333_31621473_31621648_31621886_31648100_31648277_31650698_31650779_31662143
transcript_137193.known	chr22	-	2534	7	FSM	ENSG00000241878.12	ENST00000460723.5	2534	7	0	0	0	0	multi-exon	FALSE	canonical	3	366	junction_4	25.7336787541584	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTCTGTTCCTGGAGG	-31658606	True	NA	0	True	AATAAA	-18	NA	31662215	31618490	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_31619837_31620552_31620714_31620995_31621143_31621333_31621886_31648100_31648277_31650698_31650779_31662143
transcript_137197.known	chr22	-	2264	7	FSM	ENSG00000241878.12	ENST00000437808.5	2264	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	161.898802411328	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATCAAACTTAAAA	-31658612	True	NA	-20	True	NA	NA	NA	31662221	31618510	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_31619837_31620552_31620714_31620995_31621143_31621333_31621473_31621648_31621886_31648100_31648277_31662143
transcript_137198.known	chr22	-	10827	9	FSM	ENSG00000183530.14	ENST00000327423.11	10827	9	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_8	19.8557296516648	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCTCAAGGCCGTTACT	-31743452	True	NA	-8	True	AATAAA	-22	NA	31750132	31681346	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_31685804_31688155_31688228_31701655_31701763_31703549_31703722_31704654_31704727_31712082_31717292_31725537_31725611_31738386_31738912_31749992
transcript_1372.known	chr1	+	1914	9	FSM	ENSG00000187730.9	ENST00000378585.7	1914	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2.02715934252836	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCTGCGCTTCACTCCT	2019234	True	NA	20	True	AATAAA	-34	NA	2019344	2030758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_2019492_2024941_2025055_2025333_2025402_2025517_2025739_2027576_2027660_2028154_2028293_2029110_2029267_2029550_2029763_2029982
transcript_137202.nnic	chr22	-	4202	4	NNC	ENSG00000183530.14	novel	10827	9	NA	NA	-11	2278	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_3	22.9927524813074	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGTGAAGAAAACGTATG	-31743471	True	NA	NA	False	AATAAA	-5	NA	31750151	31714448	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_31717292_31725537_31725611_31738386_31738912_31749390
transcript_137204.nic	chr22	-	3643	4	ISM	ENSG00000183530.14	ENST00000327423.11	10827	9	-62	33102	-54	2278	5prime_fragment	FALSE	canonical	3	39	junction_3	7.36357401145817	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGTGAAGAAAACGTATG	-31743514	True	NA	NA	False	AATAAA	-5	NA	31750194	31714448	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_-_31717292_31725537_31725611_31738386_31738912_31749992
transcript_13721.known	chr1	+	3800	16	FSM	ENSG00000143398.20	ENST00000368888.9	3800	16	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	181.289038707682	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTATTTTTTCTGATTC	151187459	True	NA	31	True	AATAAA	-20	NA	151198551	151249531	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151199082_151224244_151224280_151224370_151224407_151227319_151227401_151231670_151231802_151232247_151232366_151232550_151232704_151234196_151234497_151236557_151236764_151238181_151238266_151239129_151239179_151239954_151240040_151242122_151242270_151242437_151242568_151246919_151246966_151247862
transcript_137212.nic	chr22	-	2395	4	ISM	ENSG00000183530.14	ENST00000327423.11	10827	9	-62	34350	-54	1030	5prime_fragment	FALSE	canonical	3	39	junction_3	7.36357401145817	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATCTCTCCACCAGGTAA	-31743514	True	NA	NA	False	AATAAA	-2	NA	31750194	31715696	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_-_31717292_31725537_31725611_31738386_31738912_31749992
transcript_137215.nic	chr22	-	1001	4	ISM	ENSG00000183530.14	ENST00000327423.11	10827	9	0	35682	0	-302	5prime_fragment	FALSE	canonical	3	39	junction_3	7.36357401145817	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATGTGAAGAATTAAAAAG	-31743452	True	NA	NA	False	AAGAAA	-3	NA	31750132	31717028	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_-_31717292_31725537_31725611_31738386_31738912_31749992
transcript_137217.known	chr22	-	718	3	FSM	ENSG00000183530.14	ENST00000461722.1	718	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	27.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATCTGCTGAAAAGACAG	-31743392	True	NA	NA	False	NA	NA	NA	31750072	31716726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_31717292_31725537_31725611_31749992
transcript_137221.known	chr22	+	6554	43	FSM	ENSG00000100150.20	ENST00000651528.2	6554	43	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_32	41.2914534375351	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAACTAGAACTTTTTGGT	31751423	True	NA	NA	False	TATAAA	-23	NA	31754018	31908033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31754165_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906_31783986_31784813_31784876_31792032_31792103_31792744_31792818_31797599_31797704_31798581_31798657_31802703_31802839_31804161_31804224_31804841_31804916_31806121_31806192_31809610_31809648_31810520_31810642_31814991_31815213_31819021_31819226_31821501_31821638_31822692_31822791_31833914_31833981_31836971_31837156_31838684_31838846_31843094_31843213_31843644_31843813_31845017_31845238_31846833_31846968_31857444_31857554_31861367_31861434_31870589_31870745_31873254_31873333_31874272_31874406_31876156_31876266_31879524_31879753_31893581_31893752_31897481_31897654_31901741_31901803_31905983_31906067_31906204
transcript_137222.known	chr22	+	5383	42	FSM	ENSG00000100150.20	ENST00000644331.1	5383	42	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	41.7916989785031	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAATAAAGAGCTCCACGT	31753901	False	NA	-19	True	NA	NA	NA	31753911	31906989	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31753997_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906_31783986_31784813_31784876_31792032_31792103_31792744_31792818_31797599_31797704_31798581_31798657_31802703_31802839_31804161_31804224_31804841_31804916_31806121_31806192_31809610_31809648_31810520_31810642_31814991_31815213_31819021_31819226_31821501_31821638_31822692_31822791_31833914_31833981_31836971_31837156_31838684_31838846_31843094_31843213_31843644_31843813_31845017_31845238_31846833_31846968_31857444_31857554_31870589_31870745_31873254_31873333_31874272_31874406_31876156_31876266_31879524_31879753_31893581_31893752_31897481_31897654_31901741_31901803_31905983_31906067_31906204
transcript_137223.known	chr22	+	5319	42	FSM	ENSG00000100150.20	ENST00000400248.7	5319	42	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_25	42.5841924236957	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTTCCCCACCCAGTT	31751378	True	NA	6	True	AATAAA	-17	NA	31753973	31907014	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31753997_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906_31783986_31784813_31784876_31792032_31792103_31792744_31792818_31797599_31797704_31798581_31798657_31802703_31802839_31804161_31804224_31804841_31804916_31806121_31806192_31809610_31809648_31810520_31810642_31814991_31815213_31819021_31819226_31821501_31821638_31822692_31822791_31833914_31833981_31836998_31837156_31838684_31838846_31843094_31843213_31843644_31843813_31845017_31845238_31846833_31846968_31857444_31857554_31870589_31870745_31873254_31873333_31874272_31874406_31876156_31876266_31879524_31879753_31893581_31893752_31897481_31897654_31901741_31901803_31905983_31906067_31906204
transcript_137224.known	chr22	+	6479	42	FSM	ENSG00000100150.20	ENST00000642696.1	6479	42	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_25	42.1590428015919	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAACTAGAACTTTTTGGT	31751405	True	NA	NA	False	TATAAA	-23	NA	31754000	31908033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31754165_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906_31783986_31784813_31784876_31792032_31792103_31792744_31792818_31797599_31797704_31798581_31798657_31802703_31802839_31804161_31804224_31804841_31804916_31806121_31806192_31809610_31809648_31810520_31810642_31814991_31815213_31819021_31819226_31821501_31821638_31822692_31822791_31833914_31833981_31836998_31837156_31838684_31838846_31843094_31843213_31843644_31843813_31845017_31845238_31846833_31846968_31857444_31857554_31870589_31870745_31873254_31873333_31874272_31874406_31876156_31876266_31879524_31879753_31893581_31893752_31897481_31897654_31901741_31901803_31905983_31906067_31906204
transcript_137228.known	chr22	+	2682	26	FSM	ENSG00000100150.20	ENST00000642974.1	2682	26	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	49.3785378479355	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAATTGTATTTTATCTTT	31753887	False	NA	NA	False	AATAAA	-17	NA	31753897	31837324	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31753997_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906_31783986_31784813_31784876_31792032_31792103_31792744_31792818_31797599_31797704_31798581_31798657_31802703_31802839_31804161_31804224_31804841_31804916_31806121_31806192_31809610_31809648_31810520_31810642_31814991_31815213_31819021_31819226_31821501_31821638_31822692_31822791_31833914_31833981_31836971
transcript_137231.known	chr22	+	1478	9	FSM	ENSG00000100150.20	ENST00000437411.6	1478	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	50.5389701121818	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTTCATTGTTTCTT	31753933	False	NA	6	True	AATAAA	-20	NA	31753943	31784788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31753997_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906
transcript_137233.known	chr22	+	1278	9	FSM	ENSG00000100150.20	ENST00000645015.1	1278	9	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	20.9250896055429	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATCCCAGCTACTCAGG	31751432	True	NA	NA	False	AATACA	-30	NA	31754027	31784504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31754165_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906
transcript_137237.known	chr22	+	5450	43	FSM	ENSG00000100150.20	ENST00000645711.1	5450	43	0	0	0	0	multi-exon	TRUE	canonical	2	17	junction_25	42.4624417210798	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGCATCATTTCTTTCCC	31753889	False	NA	-3	True	AATAAA	-8	NA	31753899	31907005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31753997_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906_31783986_31784813_31784876_31792032_31792103_31792744_31792818_31797599_31797704_31798581_31798657_31802703_31802839_31804161_31804224_31804841_31804916_31806121_31806192_31809610_31809648_31810520_31810642_31814991_31815213_31819021_31819226_31821501_31821638_31822692_31822791_31833914_31833981_31836998_31837156_31838684_31838846_31843094_31843213_31843644_31843813_31845017_31845238_31846833_31846968_31857444_31857554_31861367_31861434_31870589_31870745_31873254_31873333_31874272_31874406_31876156_31876266_31879524_31879753_31893581_31893752_31897481_31897654_31901741_31901803_31905983_31906067_31906204
transcript_137238.known	chr22	+	5207	41	FSM	ENSG00000100150.20	ENST00000645560.1	5207	41	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_22	43.2844082782704	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCACGTGCATCATTTCTT	31753921	False	NA	-7	True	AATAAA	-4	NA	31753931	31907001	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31753997_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906_31783986_31784813_31784876_31792032_31792103_31792744_31792818_31797599_31797704_31798581_31798657_31802703_31802839_31804161_31804224_31804841_31804916_31806121_31806192_31809610_31809648_31810520_31810642_31814991_31815213_31819021_31819226_31833914_31833981_31836971_31837156_31838684_31838846_31843094_31843213_31843644_31843813_31845017_31845238_31846833_31846968_31857444_31857554_31861367_31861434_31870589_31870745_31873254_31873333_31874272_31874406_31876156_31876266_31879524_31879753_31893581_31893752_31897481_31897654_31901741_31901803_31905983_31906067_31906204
transcript_137242.known	chr22	-	823	3	FSM	ENSG00000128254.16	ENST00000486651.1	823	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAAGCGGCCCCGTAATT	NA	False	NA	NA	False	NA	NA	NA	31945518	31934039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_31934450_31937988_31938116_31945232
transcript_137243.known	chr22	+	1751	2	FSM	ENSG00000128245.15	ENST00000248975.6	1751	2	0	0	0	0	multi-exon	FALSE	canonical	3	2063	junction_1	0	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTTTGGTCTTGATTT	31921613	True	NA	38	True	AATAAA	-20	NA	31944534	31957603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31944821_31956138
transcript_137244.known	chr22	+	1735	2	FSM	ENSG00000128245.15	ENST00000471374.1	1735	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTTTGGTCTTGATTT	31944953	False	NA	38	True	AATAAA	-20	NA	31944965	31957603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31945236_31956138
transcript_137245.known	chr22	+	1879	3	FSM	ENSG00000128245.15	ENST00000397492.1	1879	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTTTGGTCTTGATTT	31921600	True	NA	38	True	AATAAA	-20	NA	31944521	31957603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_31944821_31950307_31950423_31956138
transcript_137246.known	chr22	+	407	1	FSM	ENSG00000232346.1	ENST00000423610.1	407	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTCTGCAGTGCTGTA	32039221	False	NA	NA	False	NA	NA	NA	32039489	32039896	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_32039500_32039900
transcript_137247.known	chr22	-	1378	9	FSM	ENSG00000205856.4	ENST00000382097.4	1378	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	2.98956518577535	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACTTGCCCAAGGTCAC	-32159272	True	NA	1	True	AATAAA	-16	NA	32159303	32149005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_32149614_32149752_32149781_32150318_32150480_32150991_32151020_32151486_32151552_32152066_32152095_32152561_32152627_32154243_32154319_32158983
transcript_137248.known	chr22	+	5058	5	FSM	ENSG00000242082.2	ENST00000434942.2	5058	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	8.87059749960509	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTATCTGTCTCATCAC	32204497	True	NA	3	True	TATAAA	-16	NA	32205164	32273615	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_32205248_32207135_32207277_32229089_32229373_32268287_32268580_32269356
transcript_137251.known	chr22	-	2019	12	FSM	ENSG00000100220.12	ENST00000216038.6	2019	12	0	0	0	0	multi-exon	FALSE	canonical	3	1267	junction_1	99.6411744027721	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTCGTCTGTTGCTTTG	-32397327	True	NA	-10	True	AAGAAA	-29	NA	32412247	32387581	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_32388100_32392239_32392360_32393891_32394003_32395025_32395215_32396073_32396250_32397940_32398101_32399602_32399760_32401746_32401904_32406661_32406762_32408174_32408243_32408754_32408834_32412063
transcript_137255.known	chr22	-	767	5	FSM	ENSG00000100220.12	ENST00000487704.5	767	5	0	0	0	0	multi-exon	FALSE	canonical	3	1386	junction_2	100.129915609672	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACAGCCTTTGACATAGA	-32397321	True	NA	NA	False	NA	NA	NA	32412241	32401561	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_32401904_32406661_32406762_32408174_32408243_32408754_32408834_32412063
transcript_137258.known	chr22	+	2060	9	FSM	ENSG00000100225.18	ENST00000266087.12	2060	9	0	0	0	0	multi-exon	FALSE	canonical	3	454	junction_1	54.9357579359746	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGTCTTGACTTTTA	32469216	True	NA	57	True	ATTAAA	-16	NA	32474810	32498829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_32475125_32478980_32479276_32483896_32484125_32485067_32485210_32487744_32487829_32491085_32491182_32493104_32493282_32495492_32495531_32498143
transcript_137259.known	chr22	+	1921	9	FSM	ENSG00000100225.18	ENST00000425028.5	1921	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	178.411699097901	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGTCTTGACTTTTA	32469203	True	NA	57	True	ATTAAA	-16	NA	32474797	32498829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_32475125_32479132_32479276_32483896_32484125_32485067_32485210_32487744_32487829_32491085_32491182_32493104_32493282_32495492_32495531_32498143
transcript_137260.known	chr22	+	1888	9	FSM	ENSG00000100225.18	ENST00000397426.5	1888	9	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	172.636856942543	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGTCTTGACTTTTA	32474787	False	NA	57	True	ATTAAA	-16	NA	32475256	32498829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_32475399_32478980_32479276_32483896_32484125_32485067_32485210_32487744_32487829_32491085_32491182_32493104_32493282_32495492_32495531_32498143
transcript_137261.known	chr22	+	1535	9	FSM	ENSG00000100225.18	ENST00000452138.3	1535	9	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_1	181.946420684772	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGAGTGTTATTTTCTGAT	32474767	False	NA	NA	False	NA	NA	NA	32475236	32498608	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_32475399_32479132_32479276_32483896_32484125_32485067_32485210_32487744_32487829_32491085_32491182_32493104_32493282_32495492_32495531_32498143
transcript_137262.nnic	chr22	+	2150	8	NIC	ENSG00000100225.18	novel	2060	9	NA	NA	-3	-10	combination_of_known_splicesites	FALSE	canonical	3	14	junction_7	194.723561250616	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTAAATTACATGGTGGTC	NA	False	NA	47	True	ATTAAA	-6	NA	32474672	32498819	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_32475125_32478980_32479276_32483896_32484125_32485067_32485210_32487744_32487829_32491085_32491182_32493104_32493282_32498143
transcript_137267.known	chr22	+	1900	8	FSM	ENSG00000100225.18	ENST00000420700.5	1900	8	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	181.76728786769	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGTCTTGACTTTTA	NA	False	NA	57	True	ATTAAA	-16	NA	32474675	32498829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_32475125_32483896_32484125_32485067_32485210_32487744_32487829_32491085_32491182_32493104_32493282_32495492_32495531_32498143
transcript_137271.known	chr22	-	7867	14	FSM	ENSG00000185666.15	ENST00000358763.7	7867	14	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	9.07692307692308	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATATGGTTTTGTATGAAT	-33056787	True	NA	NA	False	AAGAAA	-33	NA	33058381	32507819	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_32513825_32518042_32518335_32527917_32528006_32528873_32529009_32533792_32533896_32538035_32538111_32541570_32541714_32596673_32596737_32864914_32865005_32868965_32869126_32931389_32931482_32980644_32980703_33006351_33006825_33058291
transcript_137275.nnic	chr22	-	4990	6	ISM	ENSG00000185666.15	ENST00000358763.7	7867	14	-26	353094	-26	3661	5prime_fragment	FALSE	canonical	3	20	junction_5	9.49526197637537	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAACAGAAACCCTACAAC	-33056813	True	NA	NA	False	NA	NA	NA	33058407	32860913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_-_32865005_32868965_32869126_32931389_32931482_32980644_32980703_33006351_33006825_33058291
transcript_137277.known	chr22	+	4597	5	FSM	ENSG00000100234.12	ENST00000266085.7	4597	5	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_3	8.07387763097757	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGCTGTCTCTTGCCTT	32801148	True	NA	21	True	AGTAAA	-21	NA	32801704	32863041	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_32802123_32849451_32849535_32857248_32857361_32858016_32858139_32859179
transcript_137283.known	chr22	-	3823	15	FSM	ENSG00000133424.22	ENST00000676370.1	3823	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	41.9163403917462	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCCCTCCCACTCTTGCA	-33922453	False	NA	-10	True	AATAAA	-26	NA	33922596	33273076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_33274625_33277059_33277256_33283201_33283349_33304228_33304508_33316084_33316249_33337645_33337802_33381918_33382045_33384191_33384305_33432160_33432266_33564847_33565020_33604434_33604559_33626243_33626327_33650366_33650669_33761370_33761559_33922476
transcript_137286.known	chr22	+	4095	11	FSM	ENSG00000100281.14	ENST00000216106.6	4095	11	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	32.0856665818244	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTCTCAGCTGTCTTT	35253706	True	NA	35	True	AATAAA	-45	NA	35257492	35295807	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_35257558_35262322_35262422_35263077_35263227_35263795_35263875_35264647_35265604_35283961_35284044_35285996_35286062_35287346_35287453_35288237_35288408_35292991_35293115_35293606
transcript_137288.known	chr22	+	4216	12	FSM	ENSG00000100281.14	ENST00000418170.5	4216	12	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	27.9852381394014	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTCTCAGCTGTCTTT	35253700	True	NA	35	True	AATAAA	-45	NA	35257486	35295807	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_35257558_35262322_35262422_35263077_35263227_35263795_35263875_35263981_35264097_35264647_35265604_35283961_35284044_35285996_35286062_35287346_35287453_35288237_35288408_35292991_35293115_35293606
transcript_13729.known	chr1	+	3767	15	FSM	ENSG00000143398.20	ENST00000349792.9	3767	15	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_1	67.9428406223697	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTTCTGATTCTTTTT	151187458	True	NA	36	True	AATAAA	-25	NA	151198550	151249536	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151199082_151224247_151224280_151227319_151227401_151231670_151231802_151232247_151232366_151232550_151232704_151234196_151234497_151236557_151236764_151238181_151238266_151239129_151239179_151239954_151240040_151242122_151242270_151242437_151242568_151246919_151246966_151247862
transcript_137291.known	chr22	+	1325	5	FSM	ENSG00000100281.14	ENST00000455359.5	1325	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	21.7987958383026	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGAAGGACAAAGAGAG	35253709	True	NA	2	True	AAAAAG	-7	NA	35257495	35265567	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_35257558_35263077_35263227_35263795_35263875_35263981_35264097_35264647
transcript_137294.nic	chr22	+	1108	5	ISM	ENSG00000100281.14	ENST00000216106.6	4095	11	-16	30460	-10	-220	5prime_fragment	FALSE	canonical	3	30	junction_4	31.9951168149141	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGTCAAAGAAGAGCAAAA	35253690	True	NA	24	True	AAGAAA	-3	NA	35257476	35265347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_35257558_35262322_35262422_35263077_35263227_35263795_35263875_35264647
transcript_137295.nic	chr22	+	1331	5	ISM	ENSG00000100281.14	ENST00000216106.6	4095	11	-16	30237	-10	0	5prime_fragment	FALSE	canonical	3	30	junction_4	31.9951168149141	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGGACAAAGAGAGAGA	35253690	True	NA	5	True	AAAAAG	-10	NA	35257476	35265570	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_35257558_35262322_35262422_35263077_35263227_35263795_35263875_35264647
transcript_137296.known	chr22	+	1257	4	FSM	ENSG00000100281.14	ENST00000420166.5	1257	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	32.3831231765354	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGGACAAAGAGAGAGA	35253665	True	NA	5	True	AAAAAG	-10	NA	35257451	35265570	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_35257558_35263077_35263227_35263795_35263875_35264647
transcript_137313.known	chr22	+	2278	15	FSM	ENSG00000100284.22	ENST00000449058.7	2278	15	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_14	21.3724264472918	890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCTAGCAGCATTGTCA	35295975	True	NA	13	True	ATTAAA	-13	NA	35299893	35347973	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_35299981_35317876_35317962_35321958_35322038_35323027_35323178_35323495_35323631_35323767_35323915_35327270_35327388_35330346_35330481_35332980_35333015_35333403_35333498_35334327_35334449_35338712_35338789_35345724_35345785_35346929_35346970_35347054
transcript_137325.nnic	chr22	+	2333	14	NIC	ENSG00000100284.22	novel	2278	15	NA	NA	-40	0	combination_of_known_splicesites	TRUE	canonical	3	15	junction_2	55.7040998990391	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCTAGCAGCATTGTCA	NA	False	NA	13	True	ATTAAA	-13	NA	35299759	35347973	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_35299981_35317876_35317962_35323027_35323178_35323495_35323631_35323767_35323915_35327270_35327388_35330346_35330481_35332980_35333015_35333403_35333498_35334327_35334449_35338712_35338789_35345724_35345785_35346929_35346970_35347054
transcript_137327.known	chr22	+	2211	14	FSM	ENSG00000100284.22	ENST00000424387.5	2211	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	58.5182922900556	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCATTGTCAAGTCTCCT	35295965	True	NA	21	True	ATTAAA	-21	NA	35299883	35347981	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_35299981_35321958_35322038_35323027_35323178_35323495_35323631_35323767_35323915_35327270_35327388_35330346_35330481_35332980_35333015_35333403_35333498_35334327_35334449_35338712_35338789_35345724_35345785_35346929_35346970_35347054
transcript_13733.known	chr1	+	3737	15	FSM	ENSG00000143398.20	ENST00000409426.5	3737	15	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	96.8155199229916	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATAAACTTTAATGAGTT	151187459	True	NA	4	True	TATAAA	-20	NA	151198551	151249504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151199082_151224244_151224280_151227319_151227401_151231670_151231802_151232247_151232366_151232550_151232704_151234196_151234497_151236557_151236764_151238181_151238266_151239129_151239179_151239954_151240040_151242122_151242270_151242437_151242568_151246919_151246966_151247862
transcript_137334.known	chr22	+	555	2	FSM	ENSG00000100284.22	ENST00000465529.1	555	2	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGAGTGTGTACTAGAGAG	35295947	True	NA	NA	False	NA	NA	NA	35299865	35318316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_35299981_35317876
transcript_137335.known	chr22	+	1554	5	FSM	ENSG00000100292.18	ENST00000216117.9	1554	5	0	0	0	0	multi-exon	FALSE	canonical	2	42	junction_1	14.7139389695622	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAAGTAGTTTTCATGG	35379948	True	NA	18	True	AATAAA	-19	NA	35381095	35394207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_35381197_35383105_35383227_35386684_35387177_35389863_35389964_35393467
transcript_13735.known	chr1	+	3613	14	FSM	ENSG00000143398.20	ENST00000368890.8	3613	14	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_11	147.64278015719	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTATTTTTTCTGATTC	151187460	True	NA	31	True	AATAAA	-20	NA	151198552	151249531	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151199082_151224247_151224280_151227319_151227401_151231670_151231802_151232247_151232366_151232550_151232704_151234196_151234497_151236557_151236764_151238181_151238266_151239129_151239179_151239954_151240040_151242437_151242568_151246919_151246966_151247862
transcript_137359.known	chr22	+	3458	17	FSM	ENSG00000100297.16	ENST00000216122.9	3458	17	0	0	0	0	multi-exon	FALSE	canonical	3	1181	junction_10	102.752737189819	5594	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGCCTGGTCATTGTTGAA	35376293	True	NA	19	True	AATACA	-16	NA	35400139	35425431	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_35400209_35400430_35400606_35403206_35403334_35403413_35403543_35406552_35406726_35408407_35408564_35410743_35410911_35412509_35412682_35413874_35413987_35415828_35415973_35416338_35416405_35416637_35416815_35417743_35417857_35419883_35420013_35421317_35421461_35423213_35423342_35424153
transcript_1374.known	chr1	+	1578	8	FSM	ENSG00000187730.9	ENST00000640030.1	1578	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	2.60298102261266	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATAAAGCCTTGGCCTGG	2019373	False	NA	-21	True	NA	NA	NA	2019483	2030717	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_2019492_2024941_2025055_2025333_2025402_2025517_2025739_2027576_2027660_2028154_2028293_2029550_2029763_2029982
transcript_137413.known	chr22	+	3447	3	FSM	ENSG00000100302.7	ENST00000216127.5	3447	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	2	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTCCTTGCCCATGTG	35540798	True	NA	10	True	AATAAA	-18	NA	35540830	35553999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_35541501_35546800_35547081_35551502
transcript_137414.known	chr22	-	582	4	FSM	ENSG00000198125.13	ENST00000406324.5	582	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	1.69967317119759	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGGCCCCGGGTTCAAG	NA	False	NA	NA	False	NA	NA	NA	35622561	35607271	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_35607444_35610883_35611107_35617162_35617266_35622477
transcript_137417.nic	chr22	-	1765	14	NIC	ENSG00000100320.23	novel	1409	14	NA	NA	247	0	combination_of_known_junctions	FALSE	canonical	3	213	junction_5	62.2804308832712	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATGCATTTCCATGTCT	-36028558	False	NA	NA	False	TTTAAA	-20	NA	36028577	35743932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_35744250_35745922_35745996_35746472_35746562_35756104_35756145_35759887_35760021_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781744_35809779_35810005_35938846_35938898_36028239
transcript_137418.known	chr22	-	7224	14	FSM	ENSG00000100320.23	ENST00000438146.7	7224	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	114.746130898663	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGGGCTGTGTGTATT	-36027546	True	NA	-5	True	AATAAA	-15	NA	36028824	35738735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_35744250_35745922_35745996_35746472_35746562_35756104_35756145_35759887_35760033_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781747_35809779_35810005_35938846_35938898_36028239
transcript_137419.nic	chr22	-	1611	14	NIC	ENSG00000100320.23	novel	1409	14	NA	NA	247	0	combination_of_known_junctions	FALSE	canonical	3	213	junction_5	62.2804308832712	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACACAAAAAAAG	-36028558	False	NA	30	True	AAAACA	-12	NA	36028577	35744086	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_35744250_35745922_35745996_35746472_35746562_35756104_35756145_35759887_35760021_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781744_35809779_35810005_35938846_35938898_36028239
transcript_13742.known	chr1	+	2297	14	FSM	ENSG00000143398.20	ENST00000441902.6	2297	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	164.366598487116	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTATTGAATTTTTTTCAG	151187460	True	NA	NA	False	NA	NA	NA	151198552	151248149	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151199082_151224244_151224280_151227319_151227401_151231670_151231802_151232247_151232366_151232550_151232704_151234196_151234497_151236557_151236764_151239129_151239179_151239954_151240040_151242122_151242270_151242437_151242568_151246919_151246966_151247862
transcript_137422.known	chr22	-	1254	13	FSM	ENSG00000100320.23	ENST00000416721.6	1254	13	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_12	84.0459530389312	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATATTTACTAGTAGAGG	-35840110	True	NA	-31	True	NA	NA	NA	35840284	35744147	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_35744250_35745922_35745996_35746472_35746562_35756104_35756145_35759887_35760021_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781744_35809779_35810005_35840191
transcript_137429.nic	chr22	-	1506	13	NIC	ENSG00000100320.23	novel	1254	13	NA	NA	-59	0	combination_of_known_junctions	FALSE	canonical	3	105	junction_12	98.9069076904586	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACACAAAAAAAG	NA	False	NA	30	True	AAAACA	-12	NA	35840472	35744086	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_35744250_35745922_35745996_35746472_35746562_35756104_35756145_35759887_35760021_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781747_35809779_35810005_35840191
transcript_137434.known	chr22	-	6932	12	FSM	ENSG00000100320.23	ENST00000405409.6	6932	12	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_3	130.731508339525	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGGGCTGTGTGTATT	NA	False	NA	-5	True	AATAAA	-15	NA	35840587	35738735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_35744250_35745922_35745996_35746472_35746562_35759887_35760021_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781747_35809779_35810005_35840191
transcript_137436.known	chr22	-	1706	12	FSM	ENSG00000100320.23	ENST00000414461.6	1706	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	147.255049444075	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTCCTGTCTTCTCCGT	-35840044	True	NA	-3	True	ATTAAA	-20	NA	35840218	35743601	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_35744250_35745922_35745996_35746472_35746562_35759887_35760033_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781744_35809779_35810005_35840191
transcript_137439.known	chr22	-	2429	5	FSM	ENSG00000128335.14	ENST00000358502.10	2429	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	3.83242742918897	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGACTTGTTCGAGTCAT	-36238941	True	NA	-5	True	AATAAA	-17	NA	36239527	36226208	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_36228281_36231339_36231467_36233152_36233242_36233401_36233456_36239440
transcript_137443.known	chr22	-	7451	41	FSM	ENSG00000100345.23	ENST00000216181.11	7451	41	0	0	0	0	multi-exon	TRUE	canonical	3	729	junction_34	194.160140090596	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCCGTGTCTGTAGCATT	-36373604	True	NA	-5	True	AATAAA	-16	NA	36387967	36281279	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_36282786_36284092_36284266_36284402_36284512_36285120_36285330_36285657_36285782_36285864_36285954_36286717_36286847_36288251_36288414_36288726_36288940_36289084_36289298_36291985_36292235_36293328_36293482_36293758_36293864_36294091_36294299_36294931_36295077_36295504_36295718_36296842_36297015_36298918_36299043_36300126_36300265_36300850_36301058_36301533_36301666_36302567_36302677_36303994_36304156_36305032_36305103_36305929_36306052_36306413_36306608_36309281_36309397_36312048_36312223_36314144_36314319_36316516_36316670_36318206_36318326_36319539_36319636_36320219_36320364_36320797_36320897_36321757_36321822_36322428_36322522_36326567_36326662_36327460_36327489_36341369_36341527_36348903_36349256_36387806
transcript_137451.nic	chr22	-	5025	33	ISM	ENSG00000100345.23	ENST00000216181.11	7451	41	-100	7472	-57	-4538	5prime_fragment	FALSE	canonical	3	729	junction_26	134.999291086102	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGAAGCAGCTGGTCA	-36373704	False	NA	NA	False	NA	NA	NA	36388067	36288751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_-_36288940_36289084_36289298_36291985_36292235_36293328_36293482_36293758_36293864_36294091_36294299_36294931_36295077_36295504_36295718_36296842_36297015_36298918_36299043_36300126_36300265_36300850_36301058_36301533_36301666_36302567_36302677_36303994_36304156_36305032_36305103_36305929_36306052_36306413_36306608_36309281_36309397_36312048_36312223_36314144_36314319_36316516_36316670_36318206_36318326_36319539_36319636_36320219_36320364_36320797_36320897_36321757_36321822_36322428_36322522_36326567_36326662_36327460_36327489_36341369_36341527_36348903_36349256_36387806
transcript_13746.nnic	chr1	+	3513	13	NIC	ENSG00000143398.20	novel	3613	14	NA	NA	-28	0	combination_of_known_splicesites	TRUE	canonical	3	28	junction_11	149.865750108407	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTATTTTTTCTGATTC	151187430	True	NA	31	True	AATAAA	-20	NA	151198522	151249531	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_151199082_151224247_151224280_151227319_151227401_151231670_151231802_151232247_151232366_151232550_151232704_151234196_151234497_151236557_151236764_151238181_151238266_151239129_151239179_151239954_151240040_151246919_151246966_151247862
transcript_137464.nic	chr22	-	3256	24	ISM	ENSG00000100345.23	ENST00000216181.11	7451	41	-49	17712	-6	1918	5prime_fragment	FALSE	canonical	3	729	junction_17	76.190041969237	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGGAGGAGAAATCTAA	-36373653	True	NA	NA	False	AAGAAA	-43	NA	36388016	36298991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_-_36299043_36300126_36300265_36300850_36301058_36301533_36301666_36302567_36302677_36303994_36304156_36305032_36305103_36305929_36306052_36306413_36306608_36309281_36309397_36312048_36312223_36314144_36314319_36316516_36316670_36318206_36318326_36319539_36319636_36320219_36320364_36320797_36320897_36321757_36321822_36322428_36322522_36326567_36326662_36327460_36327489_36341369_36341527_36348903_36349256_36387806
transcript_137466.nic	chr22	-	3059	22	ISM	ENSG00000100345.23	ENST00000216181.11	7451	41	-100	19630	-57	0	5prime_fragment	FALSE	canonical	3	729	junction_15	77.3728786996881	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGGAGCGCTGCCAGCAC	-36373704	False	NA	NA	False	NA	NA	NA	36388067	36300909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_-_36301058_36301533_36301666_36302567_36302677_36303994_36304156_36305032_36305103_36305929_36306052_36306413_36306608_36309281_36309397_36312048_36312223_36314144_36314319_36316516_36316670_36318206_36318326_36319539_36319636_36320219_36320364_36320797_36320897_36321757_36321822_36322428_36322522_36326567_36326662_36327460_36327489_36341369_36341527_36348903_36349256_36387806
transcript_137487.known	chr22	+	510	2	FSM	ENSG00000223695.1	ENST00000424761.1	510	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTGGCTCATGCCTGT	36388579	False	NA	NA	False	NA	NA	NA	36388625	36396517	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_36388736_36396117
transcript_137489.nnic	chr22	-	884	5	NNC	ENSG00000100348.10	novel	570	5	NA	NA	-19	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	302.66431487706	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCAATGTCACATCTGTG	-36477912	True	NA	-16	True	AATAAA	-17	NA	36481659	36467047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_36467328_36467796_36467918_36476732_36476857_36480574_36480838_36481563
transcript_137490.known	chr22	-	570	5	FSM	ENSG00000100348.10	ENST00000411915.1	570	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	345.109765147264	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGGACGTGGTGGACAAG	-36477849	True	NA	NA	False	NA	NA	NA	36481596	36467883	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_36467918_36468601_36468718_36476732_36476857_36480574_36480838_36481563
transcript_137493.known	chr22	-	736	4	FSM	ENSG00000100348.10	ENST00000487725.1	736	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	318.911691015972	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTCTCCCAGGATGTGTG	-36477885	True	NA	NA	False	NA	NA	NA	36481632	36467548	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_36467918_36476732_36476857_36480574_36480749_36481563
transcript_137494.known	chr22	-	1280	4	FSM	ENSG00000100348.10	ENST00000416967.1	1280	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	315.140533025435	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATGTCACATCTGTGTG	-36477887	True	NA	-14	True	AATAAA	-19	NA	36481634	36467045	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_36467918_36476732_36476857_36480574_36480788_36481563
transcript_137495.known	chr22	-	1336	4	FSM	ENSG00000100348.10	ENST00000216185.7	1336	4	0	0	0	0	multi-exon	FALSE	canonical	3	660	junction_3	26.2424592343528	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATGTCACATCTGTGTG	-36477893	True	NA	-14	True	AATAAA	-19	NA	36481640	36467045	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_36467918_36476732_36476857_36480574_36480838_36481563
transcript_1375.known	chr1	+	2377	8	FSM	ENSG00000187730.9	ENST00000638604.1	2377	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2.0303814862217	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTTCATTCTCCCTCACTG	2019249	True	NA	3	True	AATAAA	-17	NA	2019359	2030741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_2019492_2024941_2025055_2025333_2025402_2025517_2025739_2027576_2028293_2029110_2029267_2029550_2029763_2029982
transcript_137504.known	chr22	-	912	4	FSM	ENSG00000100348.10	ENST00000403313.5	912	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	333.053549247965	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCCCATACGCCTTTCA	-36481235	False	3747	NA	False	NA	NA	NA	36481340	36467590	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_36467918_36476732_36476857_36480574_36480838_36481142
transcript_137508.nnic	chr22	-	882	3	NIC	ENSG00000100348.10	novel	1336	4	NA	NA	0	173	combination_of_known_splicesites	TRUE	canonical	3	43	junction_1	308.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCCCAAACTAGTGAGAG	-36477893	True	NA	-30	True	AAAAAG	-13	NA	36481640	36467375	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_36467918_36480574_36480838_36481563
transcript_137516.nnic	chr22	-	4543	9	NNC	ENSG00000100350.16	novel	4906	9	NA	NA	-8	0	intron_retention	FALSE	non_canonical	0	0	junction_1	19.0640368232964	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTTTGAGTGCTATTT	-36506009	True	NA	-16	True	AGTAAA	-19	NA	36507085	36487189	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_36487874_36488866_36490268_36493632_36493804_36495966_36496209_36497990_36498157_36501240_36501408_36504097_36504368_36504514_36504767_36505895
transcript_137518.nnic	chr22	-	4531	9	NNC	ENSG00000100350.16	novel	4906	9	NA	NA	-8	0	intron_retention	FALSE	canonical	0	0	junction_1	19.0640368232964	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTTTGAGTGCTATTT	-36506009	True	NA	-16	True	AGTAAA	-19	NA	36507085	36487189	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_36487874_36488878_36490268_36493632_36493804_36495966_36496209_36497990_36498157_36501240_36501408_36504097_36504368_36504514_36504767_36505895
transcript_137521.known	chr22	-	4906	9	FSM	ENSG00000100350.16	ENST00000397224.9	4906	9	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_8	10.5475115548645	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTTTGAGTGCTATTT	-36505964	True	NA	-16	True	AGTAAA	-19	NA	36507040	36487189	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_36490268_36493632_36493804_36495966_36496209_36497990_36498157_36501240_36501408_36504097_36504368_36504514_36504767_36505895_36506424_36507008
transcript_137524.known	chr22	-	3933	9	FSM	ENSG00000100350.16	ENST00000216187.10	3933	9	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_8	17.2409396495667	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAACAAAGTATGCT	-36506977	False	NA	NA	False	AATAAA	-5	NA	36507022	36488241	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_36490268_36493632_36493804_36495966_36496209_36497990_36498157_36501240_36501408_36504097_36504368_36504514_36504767_36505895_36506424_36506911
transcript_137527.known	chr22	-	2184	8	FSM	ENSG00000100350.16	ENST00000397223.4	2184	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	7.65053019371193	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGTGGCCAGGCCTCCC	-36506458	False	NA	NA	False	NA	NA	NA	36506530	36489986	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_36490268_36493632_36493804_36495966_36496209_36497990_36498157_36501240_36501408_36504097_36504368_36504514_36504767_36505895
transcript_13754.known	chr1	+	1319	10	FSM	ENSG00000159352.16	ENST00000368884.8	1319	10	0	0	0	0	multi-exon	FALSE	canonical	3	2307	junction_1	219.335415953188	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGATGGTTTTGAGTGTG	151238430	True	NA	41	True	AATAAA	-34	NA	151254733	151267479	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151254809_151262160_151262302_151263913_151264029_151264831_151264919_151265165_151265235_151265393_151265610_151266003_151266113_151266307_151266440_151266519_151266588_151267172
transcript_137540.nnic	chr22	-	3413	7	FSM	ENSG00000100350.16	ENST00000691242.1	3929	7	-255	771	-8	-444	multi-exon	FALSE	canonical	3	9	junction_5	18.6696426199206	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTCCTAGTCTCTTCT	-36506009	True	NA	-14	True	NA	NA	NA	36507085	36489042	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_36490268_36493632_36493804_36495966_36496209_36497990_36498157_36501240_36501408_36504514_36504767_36505895
transcript_137552.nic	chr22	-	2030	16	NIC	ENSG00000100353.18	novel	1880	15	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_15	586.092696498505	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCATCGTCTGCCTGCATT	-36529220	False	NA	-23	True	AATAAA	-23	NA	36529230	36510854	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_36511001_36511502_36511787_36512459_36512603_36516477_36516608_36516704_36516791_36517300_36517432_36518762_36518911_36519404_36519538_36520575_36520689_36523208_36523282_36523894_36523981_36524595_36524733_36525663_36525710_36525998_36526132_36526819_36526906_36529075
transcript_137555.known	chr22	-	1880	15	FSM	ENSG00000100353.18	ENST00000216190.13	1880	15	0	0	0	0	multi-exon	TRUE	canonical	3	1480	junction_9	105.668522913372	1409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCATCGTCTGCCTGCATT	-36501563	True	NA	-23	True	AATAAA	-23	NA	36529166	36510854	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_36511001_36511502_36511787_36512459_36512603_36516477_36516608_36516704_36516791_36517300_36517432_36518762_36518911_36519404_36519538_36520575_36520689_36523208_36523282_36523894_36523981_36524595_36524733_36525663_36525710_36525998_36526132_36529075
transcript_137579.nic	chr22	-	852	8	NIC	ENSG00000100360.15	novel	1073	7	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	225.560707245436	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGCAGCTCCTTCCAC	-36772124	True	NA	-8	True	AATAAA	-17	NA	36776134	36758210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_36758410_36762903_36763014_36763918_36764037_36766137_36766198_36767305_36767366_36767782_36767863_36775673_36775795_36776030
transcript_137582.known	chr22	-	1073	7	FSM	ENSG00000100360.15	ENST00000433985.7	1073	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	205.80006478781	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGCAGCTCCTTCCAC	-36772109	True	NA	-8	True	AATAAA	-17	NA	36776119	36758210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_36758410_36762903_36763014_36763918_36764037_36766137_36766198_36767305_36767366_36767782_36767863_36775673
transcript_137591.known	chr22	-	1113	7	FSM	ENSG00000100360.15	ENST00000340630.9	1113	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	262.327827134082	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTTCCACTCTTGGCCT	-36772143	True	NA	1	True	AATAAA	-26	NA	36776153	36758201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_36758410_36762903_36763014_36763918_36764037_36766137_36766198_36767305_36767366_36767782_36767860_36775673
transcript_137592.known	chr22	-	6475	5	FSM	ENSG00000100360.15	ENST00000471809.5	6475	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	276.238461297481	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGCAGCTCCTTCCAC	-36772115	True	NA	-8	True	AATAAA	-17	NA	36776125	36758210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_36764037_36766137_36766198_36767305_36767366_36767782_36767860_36775673
transcript_137593.nic	chr22	-	703	5	NIC	ENSG00000100362.13	novel	595	5	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	16.3305694940501	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCTGCTTGCTCAGGAAG	-36817482	True	NA	-20	True	AATAAA	-15	NA	36817531	36800702	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_36800919_36813645_36813756_36815102_36815236_36816944_36817013_36817355
transcript_137594.known	chr22	-	550	4	FSM	ENSG00000100362.13	ENST00000417718.7	550	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	6.12825877028341	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCTGCTTGCTCAGGAAG	-36816986	False	NA	-20	True	AATAAA	-15	NA	36817035	36800702	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_36800919_36813645_36813756_36815102_36815236_36816944
transcript_13760.nnic	chr1	+	1159	9	NIC	ENSG00000159352.16	novel	1319	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	49	junction_1	879.863901052316	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTTTTGCTTCAAAT	151238430	True	NA	22	True	AATAAA	-15	NA	151254733	151267460	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_151254809_151263913_151264029_151264831_151264919_151265165_151265235_151265393_151265610_151266003_151266113_151266307_151266440_151266519_151266588_151267172
transcript_137605.known	chr22	+	1504	4	FSM	ENSG00000128309.17	ENST00000341116.7	1504	4	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	332.782211063031	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGCTCTGGGGCTGCCTCG	37009067	True	NA	34	True	AATAAA	-21	NA	37019767	37029819	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37019873_37023751_37023928_37024191_37024811_37029215
transcript_137616.known	chr22	+	1345	3	FSM	ENSG00000128309.17	ENST00000401419.7	1345	3	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	330.5	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAGTGCTAAATCTTGT	37019584	False	NA	16	True	AATAAA	-3	NA	37019634	37029801	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37019775_37024191_37024811_37029215
transcript_137621.known	chr22	+	1350	3	FSM	ENSG00000128309.17	ENST00000429360.6	1350	3	0	0	0	0	multi-exon	FALSE	canonical	3	549	junction_1	141	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTAGCTCTGGGGCTGC	37009041	True	NA	30	True	AATAAA	-17	NA	37019741	37029815	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37019873_37024191_37024811_37029215
transcript_137635.known	chr22	-	1125	3	FSM	ENSG00000128311.14	ENST00000249042.8	1125	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	41	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGTGTGTTTGCCTGCCTC	-37018196	True	NA	-3	True	AATAAA	-16	NA	37019447	37010864	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_37011326_37018137_37018754_37019399
transcript_137637.known	chr22	-	1797	2	FSM	ENSG00000128311.14	ENST00000403892.7	1797	2	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGCCTGCCTCTCTCTG	-37018216	True	NA	3	True	AATAAA	-22	NA	37019467	37010858	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_37011326_37018137
transcript_137638.known	chr22	+	1453	4	FSM	ENSG00000128309.17	ENST00000404802.7	1453	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	355.876383032086	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAATAACCAAGTGCTAA	37008995	True	NA	9	True	NA	NA	NA	37019695	37029794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37019775_37023751_37023928_37024191_37024811_37029215
transcript_137639.known	chr22	+	1763	9	FSM	ENSG00000100379.18	ENST00000403888.8	1760	9	-3	0	0	0	multi-exon	FALSE	canonical	2	9	junction_7	49.3298844515168	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCTGTTGCCCTCTTT	37049497	True	NA	28	True	AATAAA	-19	NA	37051738	37063390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37051950_37053099_37053209_37056319_37056412_37057397_37057494_37059312_37059439_37060822_37060923_37061103_37061176_37061538_37061630_37062524
transcript_137642.nnic	chr22	+	1694	8	NNC	ENSG00000100379.18	novel	1691	8	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	43.1636657481304	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCTGTTGCCCTCTTT	NA	False	NA	28	True	AATAAA	-19	NA	37051704	37063390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_+_37051950_37053099_37053209_37056319_37056412_37057397_37057494_37059312_37059439_37060822_37060892_37061538_37061630_37062524
transcript_137643.nic	chr22	+	2160	8	NIC	ENSG00000100379.18	novel	1760	9	NA	NA	-34	0	intron_retention	FALSE	canonical	3	14	junction_6	39.4006112042098	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCTGTTGCCCTCTTT	NA	False	NA	28	True	AATAAA	-19	NA	37051704	37063390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_37051950_37053099_37053209_37056319_37056412_37057397_37057494_37059312_37059439_37060822_37060923_37061103_37061630_37062524
transcript_137644.known	chr22	+	1691	8	FSM	ENSG00000100379.18	ENST00000402077.8	1691	8	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_6	24.9440189551053	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCTGTTGCCCTCTTT	37049497	True	NA	28	True	AATAAA	-19	NA	37051738	37063390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37051950_37053099_37053209_37056319_37056412_37057397_37057494_37059312_37059439_37060822_37060923_37061538_37061630_37062524
transcript_137648.nnic	chr22	+	1634	7	NIC	ENSG00000100379.18	novel	1691	8	NA	NA	-34	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_6	44.3975099401857	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCTGTTGCCCTCTTT	NA	False	NA	28	True	AATAAA	-19	NA	37051704	37063390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_37051950_37053099_37053209_37056319_37056412_37057397_37057494_37059312_37059439_37060822_37060923_37062524
transcript_137649.nic	chr22	+	2341	7	NIC	ENSG00000100379.18	novel	1760	9	NA	NA	-34	0	intron_retention	FALSE	canonical	3	109	junction_6	9.3704618645804	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCTGTTGCCCTCTTT	NA	False	NA	28	True	AATAAA	-19	NA	37051704	37063390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_37051950_37053099_37053209_37056319_37056412_37057397_37057494_37059312_37059439_37060822_37061630_37062524
transcript_137651.known	chr22	+	1438	7	FSM	ENSG00000100379.18	ENST00000456470.1	1438	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	43.545952739606	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAGGAACAGCCCAGCCT	37049634	False	NA	12	True	AATAAA	-3	NA	37051875	37063374	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37051950_37053099_37053209_37056319_37056412_37057397_37057494_37059312_37059439_37061538_37061630_37062524
transcript_137652.nic	chr22	+	3233	6	ISM	ENSG00000100379.18	ENST00000402077.8	1691	8	-34	3	-34	-2	intron_retention	FALSE	canonical	3	115	junction_5	7.24982758415674	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCTGGCTGTTGCCCTC	NA	False	NA	25	True	AATAAA	-16	NA	37051704	37063387	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_37051950_37053099_37053209_37056319_37056412_37057397_37057494_37059312_37059439_37060822
transcript_137653.known	chr22	+	1502	6	FSM	ENSG00000100379.18	ENST00000610767.5	1477	6	-25	0	-3	0	multi-exon	FALSE	canonical	2	9	junction_5	48.4833992207642	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGGCTGTTGCCCTCTT	37049494	True	NA	27	True	AATAAA	-18	NA	37051735	37063389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37051950_37053099_37053209_37056319_37056412_37057397_37057494_37059312_37059439_37062524
transcript_137654.known	chr22	-	4034	10	FSM	ENSG00000100385.14	ENST00000216223.10	4034	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	1.52347880008912	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATAGTGTTGATATTCA	-37149802	True	NA	NA	False	AATAAA	-31	NA	37149916	37125842	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_37128849_37132383_37132469_37135327_37135443_37136227_37136394_37137586_37137736_37139116_37139223_37142433_37142513_37143520_37143636_37144084_37144206_37149824
transcript_137660.known	chr22	-	2893	3	FSM	ENSG00000133466.14	ENST00000337843.7	2893	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	2.5	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCAGACTGGTTCTTTCT	-37188086	True	NA	-5	True	ATTAAA	-21	NA	37188247	37180165	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_37182736_37185217_37185456_37188162
transcript_137661.known	chr22	-	1472	7	FSM	ENSG00000128340.15	ENST00000249071.11	1472	7	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_5	3.74165738677394	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGAGATATCGTGATTT	-37243762	True	NA	-10	True	AATAAA	-14	NA	37244269	37225269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_37226040_37226670_37226804_37231230_37231391_37231931_37231995_37232800_37232919_37241586_37241659_37244113
transcript_137664.known	chr22	-	2073	8	FSM	ENSG00000100060.18	ENST00000356998.8	2073	8	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_5	3.98978286964827	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTCCAGTTTTCTGTT	-37486307	True	NA	0	True	ATTAAA	-21	NA	37486384	37469062	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_37470030_37472442_37472529_37474511_37474678_37476895_37476982_37479344_37479499_37480196_37480300_37480720_37480770_37485922
transcript_137665.nic	chr22	-	2074	7	NIC	ENSG00000100060.18	novel	2073	8	NA	NA	-41	0	intron_retention	FALSE	canonical	1	3	junction_6	6.81705377873919	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTCCAGTTTTCTGTT	-37486357	True	NA	0	True	ATTAAA	-21	NA	37486434	37469062	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_37470030_37472442_37472529_37474511_37474678_37476895_37476982_37479344_37479499_37480196_37480300_37485922
transcript_137666.known	chr22	-	2034	7	FSM	ENSG00000100060.18	ENST00000416983.7	2034	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	7.7817450199525	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTCCAGTTTTCTGTT	-37486310	True	NA	0	True	ATTAAA	-21	NA	37486387	37469062	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_37470030_37472442_37472529_37474511_37474678_37476895_37476982_37479344_37479499_37480196_37480300_37485915
transcript_137668.known	chr22	-	4113	21	FSM	ENSG00000100065.15	ENST00000403299.5	4113	21	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_20	12.709838708654	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTGGCCTTCTGCTTG	-37519498	False	NA	-2	True	ATTAAA	-16	NA	37519542	37490361	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_37491394_37491754_37491868_37492434_37492551_37492643_37492803_37494085_37494189_37495516_37495587_37495759_37496004_37496448_37496561_37497018_37497179_37502601_37502726_37503184_37503214_37504185_37504302_37504634_37504770_37506191_37506384_37507828_37507955_37508526_37508683_37510211_37510422_37515972_37516299_37517970_37518109_37518965_37519218_37519342
transcript_137669.known	chr22	-	4111	20	FSM	ENSG00000100065.15	ENST00000251973.10	4111	20	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_5	9.83041805385577	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTGGCCTTCTGCTTG	-37519371	False	NA	-2	True	ATTAAA	-16	NA	37519415	37490361	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_37491394_37491754_37491868_37492434_37492551_37492643_37492803_37494085_37494189_37495516_37495587_37495759_37496004_37496448_37496561_37497018_37497179_37502601_37502726_37503184_37503214_37504185_37504302_37504634_37504770_37506191_37506384_37507828_37507955_37508526_37508683_37510211_37510422_37515972_37516299_37517970_37518109_37518965
transcript_137677.nnic	chr22	+	2167	3	NNC	ENSG00000128283.7	novel	720	3	NA	NA	-741	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	46	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCCTGCAAGATGCTTG	NA	False	NA	17	True	ATTAAA	-20	NA	37559738	37569405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_+_37559867_37566071_37566813_37568107
transcript_137678.known	chr22	+	2148	3	FSM	ENSG00000128283.7	ENST00000249014.5	2148	3	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	8	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCCTGCAAGATGCTTG	37559768	True	NA	17	True	ATTAAA	-20	NA	37560479	37569405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37560589_37566071_37566813_37568107
transcript_137690.nic	chr22	+	2954	17	NIC	ENSG00000100083.19	novel	3205	18	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	65.2480543292289	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGCTGCTCTCGTGGCCC	37608897	False	NA	16	True	AATAAA	-17	NA	37608929	37633563	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_37609155_37614189_37614275_37616921_37616998_37618447_37618547_37620237_37620362_37620812_37620914_37621615_37621697_37623326_37623468_37623551_37623634_37624968_37625077_37625796_37625950_37629461_37629527_37629997_37630171_37630902_37631100_37631995_37632166_37632404_37632516_37632600
transcript_137708.known	chr22	+	2800	17	FSM	ENSG00000100083.19	ENST00000343632.9	2800	17	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	25.4545397473614	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTGCTCTCGTGGCCCT	37606374	True	NA	17	True	AATAAA	-18	NA	37608833	37633564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37608904_37614189_37614275_37616921_37616998_37618447_37618547_37620237_37620362_37620812_37620914_37621615_37621697_37623326_37623468_37623551_37623634_37624968_37625077_37625796_37625950_37629461_37629527_37629997_37630171_37630902_37631100_37631995_37632166_37632404_37632516_37632600
transcript_137709.known	chr22	+	2528	15	FSM	ENSG00000100083.19	ENST00000325180.12	2528	15	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_9	67.0382163320266	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTGCTCTCGTGGCCCT	37606385	True	NA	17	True	AATAAA	-18	NA	37608844	37633564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37608904_37614189_37614275_37616921_37616998_37618447_37618547_37620237_37620362_37620812_37620914_37621615_37621697_37623326_37623468_37623551_37623634_37629461_37629527_37629997_37630171_37630902_37631100_37631995_37632166_37632404_37632516_37632600
transcript_137710.known	chr22	+	1384	3	FSM	ENSG00000100083.19	ENST00000489772.5	1384	3	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	41.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGTAAGAAAATAATGTACA	37606370	True	NA	NA	False	AAAAAG	-7	NA	37608829	37618146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37608904_37614189_37614275_37616921
transcript_137711.known	chr22	+	3205	18	FSM	ENSG00000100083.19	ENST00000406772.5	3205	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	87.0077751765695	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGCTGCTCTCGTGGCCC	37608251	True	NA	16	True	AATAAA	-17	NA	37609039	37633563	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37609357_37613032_37613192_37614189_37614275_37616921_37616998_37618447_37618547_37620237_37620362_37620812_37620914_37621615_37621697_37623326_37623468_37623551_37623634_37624968_37625077_37625796_37625950_37629461_37629527_37629997_37630171_37630902_37631100_37631995_37632166_37632404_37632516_37632600
transcript_137716.known	chr22	+	2658	18	FSM	ENSG00000100092.24	ENST00000649765.2	2658	18	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_17	17.6876004894012	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATATTCTTTGCCTCCTTTC	37636455	True	NA	95	True	AATAAA	-31	NA	37639668	37656117	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37639847_37641125_37641169_37641373_37641479_37642538_37642616_37642894_37643007_37643097_37643175_37643643_37643789_37644636_37644706_37644869_37644961_37645364_37645511_37646817_37646930_37647266_37647349_37647440_37647522_37648318_37648436_37650151_37650250_37650541_37650726_37653778_37653874_37655271
transcript_137718.nic	chr22	+	2149	18	NIC	ENSG00000100092.24	novel	2658	18	NA	NA	-224	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_17	34.074719444044	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGCAGCTGCCCAAATG	37639430	False	NA	16	True	AATAAA	-16	NA	37639444	37656038	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_37639847_37641125_37641169_37641373_37641479_37642538_37642616_37642894_37643007_37643097_37643175_37643643_37643789_37644636_37644706_37644869_37644961_37645364_37645511_37646817_37646930_37647266_37647349_37647440_37647522_37648318_37648436_37650151_37650250_37650541_37650726_37653778_37653874_37655925
transcript_137719.nic	chr22	+	2223	18	NIC	ENSG00000100092.24	novel	2658	18	NA	NA	-224	-5	combination_of_known_junctions	FALSE	canonical	3	9	junction_17	34.074719444044	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATACATATTCTTTGCCTC	37639430	False	NA	90	True	AATAAA	-26	NA	37639444	37656112	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_37639847_37641125_37641169_37641373_37641479_37642538_37642616_37642894_37643007_37643097_37643175_37643643_37643789_37644636_37644706_37644869_37644961_37645364_37645511_37646817_37646930_37647266_37647349_37647440_37647522_37648318_37648436_37650151_37650250_37650541_37650726_37653778_37653874_37655925
transcript_13772.known	chr1	-	3673	12	FSM	ENSG00000143393.17	ENST00000368873.6	3673	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_9	60.3662376219365	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTCCCCTCCTCTCCTG	-151326468	True	NA	-12	True	AATAAA	-13	NA	151327416	151291803	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151293034_151294017_151294139_151294408_151294542_151298807_151299074_151301843_151301968_151302193_151302299_151303540_151303651_151306135_151306364_151307573_151307802_151310210_151310256_151315572_151316510_151327270
transcript_137721.nic	chr22	+	2754	17	ISM	ENSG00000100092.24	ENST00000649765.2	2658	18	-224	1526	-224	-1093	5prime_fragment	FALSE	canonical	3	108	junction_1	14.106182155353	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGTGGCAGTGAAGGAGA	37639430	False	NA	NA	False	AAAAAG	-7	NA	37639444	37654591	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_37639847_37641125_37641169_37641373_37641479_37642538_37642616_37642894_37643007_37643097_37643175_37643643_37643789_37644636_37644706_37644869_37644961_37645364_37645511_37646817_37646930_37647266_37647349_37647440_37647522_37648318_37648436_37650151_37650250_37650541_37650726_37653778
transcript_137727.nic	chr22	+	2752	17	NIC	ENSG00000100092.24	novel	2658	18	NA	NA	-216	0	intron_retention	FALSE	canonical	2	16	junction_1	34.3519809290527	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGCAGCTGCCCAAATG	37639438	False	NA	16	True	AATAAA	-16	NA	37639452	37656038	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_37639847_37641373_37641479_37642538_37642616_37642894_37643007_37643097_37643175_37643643_37643789_37644636_37644706_37644869_37644961_37645364_37645511_37646817_37646930_37647266_37647349_37647440_37647522_37648318_37648436_37650151_37650250_37650541_37650726_37653778_37653874_37655271
transcript_137738.known	chr22	+	2012	2	FSM	ENSG00000241360.2	ENST00000215904.7	2012	2	0	0	0	0	multi-exon	FALSE	canonical	3	480	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGTGTTTGAGTCTATG	37656456	True	NA	18	True	AATAAA	-18	NA	37658722	37666932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37659357_37665554
transcript_137741.known	chr22	+	528	4	FSM	ENSG00000100097.12	ENST00000215909.10	528	4	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_2	12.684198393627	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCTCGTGTGTGTGCTT	37673773	True	NA	13	True	AATAAA	-26	NA	37675635	37679802	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37675712_37676985_37677066_37678482_37678655_37679602
transcript_137744.known	chr22	+	10085	24	FSM	ENSG00000100106.22	ENST00000644935.1	10085	24	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_11	180.499527409589	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTTAGAATACAGCAATTTA	37695439	True	NA	25	True	AATAAA	-17	NA	37697047	37776556	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37697090_37697587_37697697_37701305_37701480_37710426_37710567_37713209_37713412_37715762_37715935_37723184_37726504_37733297_37733413_37734398_37735443_37738641_37738720_37740894_37741033_37751771_37751829_37754876_37754985_37755100_37755191_37755549_37755660_37757612_37758139_37759153_37759265_37765669_37765818_37768073_37768177_37769027_37769188_37769261_37769376_37771649_37771737_37772600_37772765_37773782
transcript_137746.known	chr22	+	2324	14	FSM	ENSG00000100106.22	ENST00000403663.6	2324	14	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_13	30.3995094946414	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAATTCCTGGTGGCTGTGT	37742680	True	NA	37	True	TTTAAA	-15	NA	37746232	37774140	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37746421_37751771_37751829_37754876_37754985_37755100_37755191_37755549_37755660_37757612_37758139_37759153_37759265_37765669_37765818_37768073_37768177_37769027_37769188_37769261_37769376_37771649_37771737_37772600_37772765_37773782
transcript_13775.nic	chr1	-	3765	12	NIC	ENSG00000143393.17	novel	3331	13	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_11	55.3090490705717	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTGTCATTTCCAGGT	-151327561	True	NA	-8	True	AATAAA	-14	NA	151327709	151292132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_151293034_151294017_151294139_151294408_151294542_151298807_151299074_151301843_151301968_151302193_151302299_151303540_151303651_151306135_151306364_151307573_151307802_151315572_151316510_151324744_151324918_151327270
transcript_137752.known	chr22	+	903	7	FSM	ENSG00000273899.5	ENST00000611699.1	903	7	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_6	20.5182845286832	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCATGTGTGCCTTCAT	37682814	True	NA	20	True	ATTAAA	-14	NA	37686359	37693471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37686476_37687909_37688016_37688311_37688361_37688849_37688993_37690696_37690795_37691173_37691425_37693331
transcript_137753.nnic	chr22	+	1559	7	NNC	ENSG00000273899.5	novel	945	7	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_6	99.6404647832507	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCCATGTGTGCCTTCA	NA	False	NA	19	True	ATTAAA	-13	NA	37686304	37693470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_+_37686476_37687909_37688016_37688311_37688361_37688849_37688993_37690696_37690795_37691173_37692027_37693331
transcript_137754.nnic	chr22	+	1319	7	NNC	ENSG00000273899.5	novel	813	5	NA	NA	218	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	108.436489348476	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCATGTGTGCCTTCAT	37683032	False	NA	20	True	ATTAAA	-14	NA	37686577	37693471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_+_37687110_37687909_37688016_37688311_37688361_37688849_37688993_37690696_37690795_37691173_37691425_37693331
transcript_137758.known	chr22	+	2830	6	FSM	ENSG00000273899.5	ENST00000359114.9	2830	6	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_5	11.0090871556183	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGTGTGCCTTCATTTC	37682797	True	NA	23	True	ATTAAA	-17	NA	37686342	37693474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37686476_37687909_37688016_37688311_37688361_37688849_37688993_37690696_37690795_37691173
transcript_137772.known	chr22	+	632	5	FSM	ENSG00000273899.5	ENST00000468597.5	632	5	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_2	10.3198837202751	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTCCAGTGATCCTCTG	37682800	True	NA	NA	False	NA	NA	NA	37686345	37690900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37686476_37687909_37688016_37688311_37688361_37688849_37688993_37690696
transcript_137775.known	chr22	+	2204	1	FSM	ENSG00000189060.6	ENST00000340857.4	2204	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	676	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGCGGTGTATTTTTCCT	37771006	True	NA	17	True	AATAAA	-17	NA	37805228	37807432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37805200_37807400
transcript_137776.nic	chr22	+	1607	10	NIC	ENSG00000100116.17	novel	1656	10	NA	NA	-29	0	combination_of_known_junctions	TRUE	canonical	3	19	junction_9	103.383858615464	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGGCGTGGTGGCGTAT	37805087	True	NA	NA	False	ACTAAA	-12	NA	37807875	37817176	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_37808164_37810026_37810158_37812886_37812989_37813462_37813610_37815125_37815281_37815417_37815501_37815662_37815835_37816199_37816322_37816566_37816726_37816928
transcript_137779.known	chr22	+	1473	9	FSM	ENSG00000100116.17	ENST00000248924.11	1473	9	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_2	18.9802528961023	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGGTCTGCTTTATTG	37805145	True	NA	16	True	NA	NA	NA	37807933	37816897	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37808164_37810026_37810158_37812886_37812989_37813462_37813610_37815125_37815281_37815417_37815501_37815662_37815835_37816199_37816322_37816566
transcript_137780.nnic	chr22	+	1577	9	NNC	ENSG00000100116.17	novel	1473	9	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_7	108.703078958234	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGGTCTGCTTTATTG	37805083	True	NA	16	True	NA	NA	NA	37807871	37816897	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_+_37808164_37810026_37810158_37812886_37812989_37813462_37813610_37815125_37815281_37815417_37815501_37815662_37815877_37816199_37816322_37816566
transcript_137783.nic	chr22	+	1613	9	ISM	ENSG00000100116.17	ENST00000323205.10	1656	10	-33	279	-33	0	5prime_fragment	TRUE	canonical	3	21	junction_1	108.463055346049	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGGTCTGCTTTATTG	37805083	True	NA	16	True	NA	NA	NA	37807871	37816897	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_37808164_37809948_37810158_37812886_37812989_37813462_37813610_37815125_37815281_37815417_37815501_37815662_37815835_37816199_37816322_37816566
transcript_137786.nic	chr22	+	1404	8	NIC	ENSG00000100116.17	novel	1473	9	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	112.064667919547	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGGTCTGCTTTATTG	37805083	True	NA	16	True	NA	NA	NA	37807871	37816897	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_37808164_37812886_37812989_37813462_37813610_37815125_37815281_37815417_37815501_37815662_37815835_37816199_37816322_37816566
transcript_137790.known	chr22	+	551	3	FSM	ENSG00000100116.17	ENST00000478203.1	551	3	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_2	11	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTCAGTGCCATGCCTAG	37805145	True	NA	NA	False	NA	NA	NA	37807933	37813076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37808164_37810026_37810158_37812886
transcript_137800.known	chr22	+	2669	13	FSM	ENSG00000100129.18	ENST00000652021.1	2669	13	0	0	0	0	multi-exon	FALSE	canonical	3	2244	junction_7	206.680291889564	1658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTCACGTTCAGTATTT	37816222	True	NA	22	True	CATAAA	-23	NA	37849418	37889407	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37849483_37850014_37850064_37851279_37851491_37855564_37855645_37858678_37858741_37862968_37863039_37863271_37863346_37870175_37870348_37874369_37874525_37875840_37876012_37877673_37878172_37886764_37886846_37888425
transcript_137806.known	chr22	+	1599	11	FSM	ENSG00000100129.18	ENST00000381683.10	1599	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	787.769382497187	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGGAACCTGTTTTGATG	37816220	True	NA	NA	False	NA	NA	NA	37849416	37888479	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37849483_37850014_37850064_37851279_37851491_37855564_37855645_37858678_37858741_37870175_37870348_37874369_37874525_37875840_37876012_37877673_37878172_37886764_37886846_37888425
transcript_137811.known	chr22	-	789	8	FSM	ENSG00000100124.15	ENST00000407117.6	789	8	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_5	31.8555412794082	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTCTGCAGATGCAGAG	-37843719	False	NA	NA	False	NA	NA	NA	37844170	37831978	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_37832018_37832636_37832745_37832957_37833083_37833158_37833207_37833683_37833751_37838499_37838594_37840186_37840235_37843910
transcript_13782.known	chr1	-	3934	11	FSM	ENSG00000143393.17	ENST00000368874.8	3934	11	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_10	27.8668261558434	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCCTCTCCTGTGGCCCC	-151327696	False	NA	-5	True	AATAAA	-20	NA	151327715	151291796	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151293034_151294017_151294139_151294408_151294542_151298807_151299074_151301843_151301968_151302193_151302299_151303540_151303651_151306135_151306364_151307573_151307802_151315572_151316510_151327270
transcript_137822.known	chr22	+	2282	11	FSM	ENSG00000100129.18	ENST00000406934.5	2282	11	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	784.26166551732	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTCGTCTCATTATTGT	37816284	True	NA	35	True	AGTAAA	-17	NA	37849480	37888630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37850064_37851279_37851491_37858678_37858741_37862968_37863039_37863271_37863346_37870175_37870348_37874369_37874525_37875840_37876012_37877673_37878172_37886764_37886846_37888425
transcript_137823.known	chr22	+	1294	6	FSM	ENSG00000100129.18	ENST00000482600.5	1294	6	0	0	0	0	multi-exon	FALSE	canonical	3	2309	junction_1	188.715235209031	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCGTCTCATTATTGTA	37870100	False	NA	36	True	AGTAAA	-18	NA	37870164	37888631	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37870348_37874369_37874525_37875840_37876012_37877673_37878172_37886764_37886846_37888425
transcript_137824.known	chr22	+	1708	12	FSM	ENSG00000100129.18	ENST00000477256.5	1708	12	0	0	0	0	multi-exon	FALSE	canonical	3	2244	junction_7	178.266445580302	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTTGGCTCAGGACAGA	37816224	True	NA	NA	False	NA	NA	NA	37849420	37886868	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37849483_37850014_37850064_37851279_37851491_37855564_37855645_37858678_37858741_37862968_37863039_37863271_37863346_37870175_37870348_37874369_37874525_37875840_37876012_37877673_37878172_37886764
transcript_137835.known	chr22	+	2587	16	FSM	ENSG00000100139.14	ENST00000680501.1	2587	16	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_13	24.3903441732356	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCACGAGAAGCCAGTTGG	37904407	False	NA	NA	False	NA	NA	NA	37906422	37940830	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37906569_37911951_37912001_37912350_37912493_37917706_37917796_37919035_37919179_37921971_37922427_37924659_37924718_37925660_37926044_37927410_37927827_37931798_37931934_37932552_37932680_37932797_37932889_37933038_37933113_37937084_37937195_37937745_37937793_37940708
transcript_137837.known	chr22	+	2976	16	FSM	ENSG00000100139.14	ENST00000424008.2	2976	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_15	23.631805310264	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTCTCCGCCTCCAGGG	37904407	False	NA	NA	False	NA	NA	NA	37906422	37941187	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37906569_37911951_37912001_37912350_37912493_37917706_37917796_37919035_37919179_37921971_37922427_37924659_37924718_37925660_37926044_37927410_37927827_37931798_37931934_37932552_37932680_37932797_37932889_37933038_37933113_37937079_37937195_37937745_37937820_37940708
transcript_137842.known	chr22	+	2501	15	FSM	ENSG00000100139.14	ENST00000680375.1	2501	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	25.2671441090712	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCACGAGAAGCCAGTTGG	37904407	False	NA	NA	False	NA	NA	NA	37906422	37940830	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37906569_37911951_37912001_37912350_37912493_37917706_37917796_37919035_37919179_37921971_37922427_37924659_37924718_37925660_37926044_37927410_37927827_37931798_37931934_37932552_37932680_37933038_37933113_37937079_37937195_37937745_37937793_37940708
transcript_137843.known	chr22	+	2137	15	FSM	ENSG00000100139.14	ENST00000681920.1	2137	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	25.4008677338522	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCACGAGAAGCCAGTTGG	37904407	False	NA	NA	False	NA	NA	NA	37906422	37940830	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37906569_37911951_37912001_37912350_37912493_37917706_37917796_37919035_37919179_37924659_37924718_37925660_37926044_37927410_37927827_37931798_37931934_37932552_37932680_37932797_37932889_37933038_37933113_37937079_37937195_37937745_37937793_37940708
transcript_137844.known	chr22	+	2450	15	FSM	ENSG00000100139.14	ENST00000679832.1	2450	15	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	25.3851957499899	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCACGAGAAGCCAGTTGG	37904407	False	NA	NA	False	NA	NA	NA	37906422	37940830	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37906569_37911951_37912001_37917706_37917796_37919035_37919179_37921971_37922427_37924659_37924718_37925660_37926044_37927410_37927827_37931798_37931934_37932552_37932680_37932797_37932889_37933038_37933113_37937079_37937195_37937745_37937793_37940708
transcript_137852.known	chr22	+	550	6	FSM	ENSG00000100142.16	ENST00000492213.5	550	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	949.31941937369	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTCATCATCACCGACTG	37927339	True	NA	-91	True	NA	NA	NA	37953698	37967694	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37953808_37956772_37956843_37958373_37958472_37959345_37959477_37967098_37967171_37967624
transcript_137855.known	chr22	+	2070	5	FSM	ENSG00000100142.16	ENST00000442738.7	2070	5	0	0	0	0	multi-exon	FALSE	canonical	3	1805	junction_4	112.226333808068	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGGTTCTGTTTTCTTA	37927339	True	NA	15	True	AATAAA	-16	NA	37953698	37969312	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37953808_37956772_37956843_37959345_37959477_37967098_37967171_37967624
transcript_137857.known	chr22	+	615	5	FSM	ENSG00000100142.16	ENST00000483713.5	615	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	826.828881933862	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACCCCCTTCCCCTCTGCT	37927339	True	NA	13	True	AATAAA	-14	NA	37953698	37967798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37953808_37956772_37956902_37959345_37959477_37967098_37967171_37967624
transcript_137859.known	chr22	+	760	4	FSM	ENSG00000100142.16	ENST00000606538.5	760	4	0	0	0	0	multi-exon	FALSE	canonical	3	1967	junction_3	52.8225541054408	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTCTGCGGCAGAGCTG	37927351	True	NA	48	True	NA	NA	NA	37953710	37967560	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37953808_37956772_37956843_37959345_37959477_37967098
transcript_137863.known	chr22	+	564	4	FSM	ENSG00000100142.16	ENST00000488684.5	564	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	929.361549069515	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGAACAGCTCACCAGGAA	37927339	True	NA	NA	False	NA	NA	NA	37953698	37967293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37953808_37956772_37956902_37959345_37959477_37967098
transcript_137865.known	chr22	-	2885	4	FSM	ENSG00000100146.19	ENST00000396884.8	2885	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	2.16024689946929	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTTGGTGAGCCTGACC	-37984346	True	NA	-17	True	AATAAA	-18	NA	37984555	37972311	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_37974199_37977866_37978136_37983356_37983869_37984338
transcript_137867.known	chr22	+	584	5	FSM	ENSG00000100142.16	ENST00000470701.1	584	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	849.756251815778	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTTCCCCTCTGCTTAT	37927367	True	NA	16	True	AATAAA	-17	NA	37953726	37967801	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_37953861_37956772_37956843_37959345_37959477_37967098_37967171_37967624
transcript_137875.known	chr22	+	2164	13	FSM	ENSG00000100151.16	ENST00000404072.7	2164	13	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	41.5293570862829	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTCGCAGTGGCTTCAGA	NA	False	NA	13	True	AATAAA	-20	NA	38057199	38075701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_38057490_38057752_38057851_38059233_38059346_38065001_38065131_38067703_38067771_38069032_38069123_38070837_38070892_38071681_38071745_38072476_38072611_38072999_38073093_38073772_38073824_38074306_38074452_38074863
transcript_137882.known	chr22	+	2058	13	FSM	ENSG00000100151.16	ENST00000356976.8	2058	13	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	14.4702760474322	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTCGCAGTGGCTTCAGA	38054666	True	NA	13	True	AATAAA	-20	NA	38057403	38075701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_38057588_38057752_38057851_38059233_38059346_38065001_38065131_38067703_38067771_38069032_38069123_38070837_38070892_38071681_38071745_38072476_38072611_38072999_38073093_38073772_38073824_38074306_38074452_38074863
transcript_13789.known	chr1	-	2603	10	FSM	ENSG00000143393.17	ENST00000529142.5	2603	10	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_9	50.5798476436448	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTGTCATTTCCAGGT	-151327638	False	NA	-8	True	AATAAA	-14	NA	151327657	151292132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151293034_151294017_151294139_151294408_151294542_151298807_151299074_151301843_151301968_151302193_151302299_151303540_151303651_151306135_151306364_151307573_151307802_151327270
transcript_137894.nic	chr22	+	2484	12	ISM	ENSG00000100151.16	ENST00000356976.8	2058	13	-14	0	-5	0	intron_retention	FALSE	canonical	3	134	junction_1	14.6061234752828	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTCGCAGTGGCTTCAGA	38054652	True	NA	13	True	AATAAA	-20	NA	38057389	38075701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_38057588_38057752_38057851_38059233_38059346_38065001_38065131_38067703_38067771_38069032_38069123_38070837_38070892_38071681_38071745_38072476_38072611_38072999_38073093_38073772_38073824_38074306
transcript_137898.nnic	chr22	+	2018	12	NIC	ENSG00000100151.16	novel	2058	13	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_6	45.8432471121443	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTCGCAGTGGCTTCAGA	38054652	True	NA	13	True	AATAAA	-20	NA	38057389	38075701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_38057588_38057752_38057851_38059233_38059346_38065001_38065131_38067703_38067771_38069032_38069123_38071681_38071745_38072476_38072611_38072999_38073093_38073772_38073824_38074306_38074452_38074863
transcript_137924.known	chr22	-	1865	9	FSM	ENSG00000128298.18	ENST00000332536.10	1865	9	0	0	0	0	multi-exon	TRUE	canonical	2	10	junction_7	2.59807621135332	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGCTGCTCGGGTCAGGGG	-38097573	True	NA	NA	False	NA	NA	NA	38097782	38084651	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38085376_38085685_38085733_38086241_38086450_38087123_38087265_38088747_38088965_38089095_38089232_38089521_38089675_38097031_38097179_38097690
transcript_13794.known	chr1	+	4795	9	FSM	ENSG00000143373.18	ENST00000336715.11	4795	9	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	8.51377560192891	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGAGCTCTTTTCCCTGG	151277612	True	NA	1	True	AATAAA	-4	NA	151282298	151292176	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151282396_151286274_151288407_151288527_151288707_151289094_151289272_151289377_151289541_151289677_151290008_151290121_151290235_151290431_151290574_151290714
transcript_137940.known	chr22	-	3299	17	FSM	ENSG00000184381.20	ENST00000332509.8	3299	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	16.3037572356804	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTGTGTGTGCAGTG	-38180692	True	NA	0	True	AATAAA	-20	NA	38181830	38111494	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38112306_38112503_38112578_38113486_38113655_38115526_38115682_38116074_38116212_38120758_38120910_38123094_38123259_38126370_38126450_38128268_38128431_38129453_38129563_38132830_38133014_38134987_38135085_38139981_38140170_38143104_38143289_38145437_38145654_38169217_38169472_38181663
transcript_137942.known	chr22	-	2813	17	FSM	ENSG00000184381.20	ENST00000667521.1	2813	17	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_16	14.6093666443826	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCCCTGAGGGCCTGCC	-38180662	True	NA	NA	False	NA	NA	NA	38181800	38111830	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38112306_38112503_38112578_38113486_38113655_38115526_38115682_38116074_38116212_38120758_38120910_38123094_38123259_38126370_38126450_38128268_38128431_38129453_38129563_38132830_38133014_38134987_38135085_38139981_38140170_38143104_38143289_38145437_38145654_38169217_38169472_38181783
transcript_137949.known	chr22	-	2870	16	FSM	ENSG00000184381.20	ENST00000655142.1	2870	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	19.8577161045496	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCCACCCCGAGAACCCT	-38180687	True	NA	-112	True	NA	NA	NA	38181825	38111606	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38112306_38112503_38112578_38113486_38113655_38115526_38115682_38116074_38116212_38120758_38120910_38123094_38123259_38126370_38126450_38128268_38128431_38129453_38129563_38132830_38133014_38134987_38135085_38143104_38143289_38145437_38145654_38169217_38169468_38181783
transcript_137950.nic	chr22	-	3093	16	NIC	ENSG00000184381.20	novel	3060	16	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	18.0017283120878	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCACCTGTGTTGTGTGTG	-38180657	True	NA	-5	True	AATAAA	-15	NA	38181795	38111499	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_38112306_38112503_38112578_38113486_38113655_38115526_38115682_38116074_38116212_38120758_38120910_38123094_38123259_38126370_38126450_38129453_38129563_38132830_38133014_38134987_38135085_38139981_38140170_38143104_38143289_38145437_38145654_38169217_38169468_38181663
transcript_137951.known	chr22	-	3060	16	FSM	ENSG00000184381.20	ENST00000335539.7	3060	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	18.0017283120878	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGTTGTGTGTGCAGT	-38180616	True	NA	-1	True	AATAAA	-19	NA	38181754	38111495	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38112306_38112503_38112578_38113486_38113655_38115526_38115682_38116074_38116212_38120758_38120910_38123094_38123259_38126370_38126450_38129453_38129563_38132830_38133014_38134987_38135085_38139981_38140170_38143104_38143289_38145437_38145654_38169217_38169472_38181663
transcript_137952.known	chr22	-	3011	16	FSM	ENSG00000184381.20	ENST00000402064.5	3011	16	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_8	16.3837317686377	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCACCTGTGTTGTGTGTG	-38180691	True	NA	-5	True	AATAAA	-15	NA	38181829	38111499	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38112306_38112503_38112578_38113486_38113655_38115526_38115682_38116074_38116212_38120758_38120910_38123094_38123259_38126370_38126450_38129453_38129563_38132830_38133014_38134987_38135085_38139981_38140170_38143104_38143289_38145437_38145654_38169217_38169472_38181783
transcript_137970.known	chr22	+	2374	3	FSM	ENSG00000185022.12	ENST00000338483.7	2374	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	3	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTGTATCCTGGACTA	38201583	True	NA	NA	False	AATAAA	-29	NA	38201993	38216507	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_38202213_38213822_38213890_38214419
transcript_137971.known	chr22	+	2458	3	FSM	ENSG00000185022.12	ENST00000538320.5	2458	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATAAATGTGTATCCTGG	38201521	True	NA	NA	False	AATAAA	-25	NA	38201931	38216503	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_38202239_38213822_38213890_38214419
transcript_137977.known	chr22	-	3667	10	FSM	ENSG00000198792.13	ENST00000436674.5	3667	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	171.497615431718	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGATTGTATTGAAATCT	-38265666	True	NA	-22	True	AATAAA	-29	NA	38273010	38219311	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38221711_38224784_38224980_38225423_38225594_38226778_38226871_38230668_38230745_38231243_38231335_38245934_38246101_38246784_38246886_38247769_38248020_38272883
transcript_137987.known	chr22	-	3593	9	FSM	ENSG00000198792.13	ENST00000361684.8	3593	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	134.978644144176	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATGAGATAATATAGATT	-38265320	False	NA	-34	True	AATAAA	-17	NA	38272664	38219323	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38221711_38224784_38224980_38225423_38225594_38226778_38226871_38230668_38230745_38231243_38231335_38245934_38246101_38247769_38248020_38272498
transcript_137989.known	chr22	-	3587	9	FSM	ENSG00000198792.13	ENST00000361906.8	3587	9	0	0	0	0	multi-exon	TRUE	canonical	3	372	junction_3	20.1769515784719	978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGGTGAGGTTTTT	-38265666	True	NA	-1	True	AATATA	-18	NA	38273010	38219290	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38221711_38224784_38224980_38225423_38225594_38226778_38226871_38230668_38230745_38231243_38231335_38245934_38246101_38247769_38248020_38272883
transcript_138015.known	chr22	-	4792	1	FSM	ENSG00000198792.13	ENST00000633056.1	4792	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGATTGTATTGAAATCT	-38224074	False	NA	-22	True	AATAAA	-29	NA	38224103	38219311	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38219300_38224100
transcript_138021.nnic	chr22	-	1440	12	Fusion	ENSG00000244627.5_ENSG00000213923.13	novel	2817	11	NA	NA	8247	12	multi-exon	FALSE	canonical	3	30	junction_5	416.684592451865	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-38334625	True	NA	-103	True	NA	NA	NA	38336187	38291917	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr22_-_38291939_38293254_38293320_38294108_38294249_38294341_38294535_38295386_38295448_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38336124
transcript_138027.nnic	chr22	-	1438	11	Fusion	ENSG00000244627.5_ENSG00000213923.13	novel	2817	11	NA	NA	8188	12	multi-exon	FALSE	canonical	3	80	junction_10	293.8047140534	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-38334684	True	NA	-103	True	NA	NA	NA	38336246	38291917	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr22_-_38291939_38293254_38293320_38294108_38294249_38294341_38294535_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38336124
transcript_138032.nnic	chr22	-	2227	10	Fusion	ENSG00000244627.5_ENSG00000213923.13	novel	2817	11	NA	NA	8188	12	intron_retention	FALSE	canonical	3	80	junction_9	308.642107654293	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-38334684	True	NA	-103	True	NA	NA	NA	38336246	38291917	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr22_-_38291939_38293254_38294249_38294341_38294535_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38336124
transcript_138035.known	chr22	-	2817	11	FSM	ENSG00000213923.13	ENST00000396832.6	2817	11	0	0	0	0	multi-exon	FALSE	canonical	3	517	junction_1	165.535766527962	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGCAGCCCTTTGTCCA	-38312271	True	NA	-8	True	AATAAA	-19	NA	38317433	38290690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38291939_38293254_38293320_38294108_38294249_38294341_38294535_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38317159
transcript_138036.nnic	chr22	-	1452	11	Fusion	ENSG00000244627.5_ENSG00000213923.13	novel	2817	11	NA	NA	8197	35	multi-exon	FALSE	canonical	3	80	junction_10	293.8047140534	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGCAAAAATAAACCACTCAA	-38334675	True	NA	-80	True	TTTAAA	-21	NA	38336237	38291894	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr22_-_38291939_38293254_38293320_38294108_38294249_38294341_38294535_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38336124
transcript_138048.known	chr22	-	1580	10	FSM	ENSG00000213923.13	ENST00000403904.5	1580	10	0	0	0	0	multi-exon	FALSE	canonical	3	706	junction_9	113.208209796958	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGACTGCTGCAGATGC	-38312277	True	NA	-6	True	NA	NA	NA	38317439	38293249	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38293320_38294108_38294249_38294341_38294535_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38317159
transcript_138049.nnic	chr22	-	2768	10	Fusion	ENSG00000244627.5_ENSG00000213923.13	novel	1580	10	NA	NA	8197	35	intron_retention	FALSE	canonical	3	80	junction_9	289.204272290558	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGCAAAAATAAACCACTCAA	-38334675	True	NA	-80	True	TTTAAA	-21	NA	38336237	38291894	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr22_-_38293320_38294108_38294249_38294341_38294535_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38336124
transcript_13805.known	chr1	-	637	2	FSM	ENSG00000232671.7	ENST00000660511.1	637	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAACACGCTTTGTAAAG	-151281827	True	NA	-3	True	ATTAAA	-12	NA	151281950	151280029	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151280259_151281542
transcript_138060.nnic	chr22	-	1413	10	Fusion	ENSG00000244627.5_ENSG00000213923.13	novel	1580	10	NA	NA	8197	0	multi-exon	FALSE	canonical	3	80	junction_9	289.204272290558	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGACTGCTGCAGATGC	-38334675	True	NA	-6	True	NA	NA	NA	38336237	38293249	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr22_-_38293320_38294108_38294249_38294341_38294535_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38336124
transcript_138065.nic	chr22	-	3633	9	NIC	ENSG00000213923.13	novel	1580	10	NA	NA	63	35	intron_retention	FALSE	canonical	3	706	junction_8	119.478489172738	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGCAAAAATAAACCACTCAA	-38312186	True	NA	-80	True	TTTAAA	-21	NA	38317348	38291894	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_38294249_38294341_38294535_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38317159
transcript_138066.nnic	chr22	-	3557	9	Fusion	ENSG00000244627.5_ENSG00000213923.13	novel	1580	10	NA	NA	8197	35	intron_retention	FALSE	canonical	3	80	junction_8	306.422069007766	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGCAAAAATAAACCACTCAA	-38334675	True	NA	-80	True	TTTAAA	-21	NA	38336237	38291894	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr22_-_38294249_38294341_38294535_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38336124
transcript_13807.known	chr1	-	307	2	FSM	ENSG00000232671.7	ENST00000494138.5	397	2	90	0	49	0	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGCTTTGTAAAGTAATTG	-151281870	False	NA	3	True	ATTAAA	-18	NA	151281880	151280023	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151280259_151281808
transcript_138074.known	chr22	-	1631	8	FSM	ENSG00000213923.13	ENST00000413574.6	1631	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	347.812288102508	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGTTTCTTGCGT	-38312249	True	NA	-4	True	AATAAA	-16	NA	38317411	38296204	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38296687_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38317159
transcript_138077.known	chr22	-	2127	8	FSM	ENSG00000213923.13	ENST00000405675.7	2127	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	344.53091446256	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTGTGTGTTTCTTGCG	-38312277	True	NA	-5	True	AATAAA	-15	NA	38317439	38296205	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38297156_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38317159
transcript_13808.known	chr1	-	2056	11	FSM	ENSG00000143390.18	ENST00000392746.7	2056	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	98.0898057904082	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGCTTCAAAGTTCCT	-151346783	False	NA	NA	False	AATAAA	-12	NA	151346822	151342246	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151343179_151343341_151343443_151343680_151343883_151344196_151344279_151344416_151344537_151344727_151344848_151345105_151345189_151345927_151345962_151346204_151346334_151346421_151346607_151346754
transcript_138080.nic	chr22	-	3666	7	ISM	ENSG00000213923.13	ENST00000403904.5	1580	10	91	2956	63	0	5prime_fragment	FALSE	canonical	3	706	junction_6	129.880286760112	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTGTGTGTTTCTTGCG	-38312186	True	NA	-5	True	AATAAA	-15	NA	38317348	38296205	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_-_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38317159
transcript_138085.known	chr22	-	574	5	FSM	ENSG00000244627.5	ENST00000407491.6	574	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	51.7560382950627	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGGCGTGGTGGTGCATGC	-38396829	True	NA	NA	False	AATACA	-8	NA	38398873	38344531	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38344742_38361398_38361561_38380369_38380424_38380936_38380991_38398779
transcript_138087.known	chr22	-	974	5	FSM	ENSG00000244627.5	ENST00000457665.5	974	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	50.231339818882	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGAAACTCCGTTCCCCC	-38396816	True	NA	NA	False	NA	NA	NA	38398860	38350376	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38351000_38361398_38361561_38380369_38380424_38380936_38380991_38398779
transcript_138089.known	chr22	-	792	5	FSM	ENSG00000244627.5	ENST00000455209.5	792	5	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	51.3438165702551	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAACTTTCAGATTATT	-38396877	True	NA	NA	False	NA	NA	NA	38398921	38368897	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38369380_38369985_38370046_38380369_38380424_38380936_38380991_38398779
transcript_13809.nic	chr1	-	3689	11	NIC	ENSG00000143390.18	novel	3576	11	NA	NA	-39	0	intron_retention	FALSE	canonical	0	0	junction_9	100.207983713874	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTTTGTGTTCCTCCCT	-151346872	False	NA	0	True	ATTAAA	-16	NA	151346911	151340639	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_151343179_151343341_151343443_151343680_151343883_151344196_151344279_151344416_151344537_151344727_151344848_151345105_151345189_151345927_151345962_151346204_151346334_151346484_151346607_151346754
transcript_138091.known	chr22	-	679	4	FSM	ENSG00000244627.5	ENST00000443658.5	679	4	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	27.9324582201822	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGAGACTCCGTCTCAAAA	-38396885	True	NA	NA	False	NA	NA	NA	38398929	38361139	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38361561_38380369_38380424_38380936_38380991_38398779
transcript_138097.known	chr22	-	4761	13	FSM	ENSG00000100201.23	ENST00000403230.3	4761	13	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	7.44377069919689	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGAGCTTTTATTGCTT	-38450307	True	NA	-9	True	AATAAA	-18	NA	38506311	38483437	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38486441_38487878_38488116_38492055_38492116_38493709_38493772_38494020_38494132_38494629_38494803_38494885_38495047_38495795_38495938_38498084_38498151_38498439_38498574_38499399_38499500_38501129_38501281_38505950
transcript_138098.known	chr22	-	4791	13	FSM	ENSG00000100201.23	ENST00000396821.8	4791	13	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	9.31694990624912	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTGAGCTTTTATTGC	-38450333	True	NA	-11	True	AATAAA	-16	NA	38506337	38483439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38486441_38487872_38488116_38492055_38492116_38493709_38493772_38494020_38494132_38494629_38494803_38494885_38495047_38495795_38495938_38498084_38498151_38498439_38498574_38499399_38499500_38501129_38501281_38505950
transcript_138104.nic	chr22	-	2258	11	ISM	ENSG00000100201.23	ENST00000216019.11	6441	12	-32	5653	11	-1021	5prime_fragment	FALSE	canonical	3	47	junction_10	6.9	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTATTTGTATTACAAGGA	-38450322	True	NA	NA	False	TTTAAA	-7	NA	38506326	38491333	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_-_38492116_38493709_38493772_38494020_38494132_38494629_38494803_38494885_38495047_38495795_38495938_38498084_38498151_38498439_38498574_38499399_38499500_38501129_38501281_38505950
transcript_138109.nic	chr22	-	1361	9	ISM	ENSG00000100201.23	ENST00000216019.11	6441	12	-43	8404	0	225	5prime_fragment	FALSE	canonical	3	47	junction_8	7.66383552798467	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAATATTTGTGGAGACA	-38450333	True	NA	NA	False	AAGAAA	-25	NA	38506337	38494084	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_-_38494132_38494629_38494803_38494885_38495047_38495795_38495938_38498084_38498151_38498439_38498574_38499399_38499500_38501129_38501281_38505950
transcript_138110.nic	chr22	-	1298	8	ISM	ENSG00000100201.23	ENST00000216019.11	6441	12	-43	8965	0	-336	5prime_fragment	FALSE	canonical	3	47	junction_7	8	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGAAAAAGACCACAAGTAT	-38450333	True	NA	NA	False	NA	NA	NA	38506337	38494645	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_-_38494803_38494885_38495047_38495795_38495938_38498084_38498151_38498439_38498574_38499399_38499500_38501129_38501281_38505950
transcript_138115.known	chr22	+	1694	5	FSM	ENSG00000100196.11	ENST00000216014.9	1694	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	2.95803989154981	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTTTTTATTTATACCT	38467189	True	NA	18	True	AATAAA	-21	NA	38468095	38483447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_38468325_38474522_38474624_38479592_38479752_38481211_38481465_38482495
transcript_138117.known	chr22	+	931	4	FSM	ENSG00000100196.11	ENST00000409006.3	931	4	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	3.39934634239519	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCAGGCCAATAGGTTAT	38467171	True	NA	NA	False	AATAAA	-20	NA	38468077	38481635	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_38468325_38474522_38474624_38479592_38479752_38481211
transcript_138119.known	chr22	-	6441	12	FSM	ENSG00000100201.23	ENST00000216019.11	6441	12	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	7.6676846850762	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGCTGACTGGAAGAGAT	-38450290	True	NA	NA	False	AATATA	-11	NA	38506294	38485680	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38486441_38487878_38492116_38493709_38493772_38494020_38494132_38494629_38494803_38494885_38495047_38495795_38495938_38498084_38498151_38498439_38498574_38499399_38499500_38501129_38501281_38505950
transcript_138123.known	chr22	-	269	2	FSM	ENSG00000100206.11	ENST00000464842.1	269	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTGAGATTTCTTTTT	-38569583	True	NA	-20	True	AATAAA	-22	NA	38570204	38569283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38569391_38570042
transcript_138127.known	chr22	-	10396	17	FSM	ENSG00000184949.18	ENST00000540952.6	10396	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	1.79843682124227	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTTATTTATTTCATT	NA	False	NA	-8	True	AATAAA	-16	NA	38656629	38578119	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38586200_38591360_38591541_38597203_38597357_38599763_38599922_38605253_38605349_38607388_38607477_38620211_38620292_38623171_38623280_38626179_38626304_38628237_38628343_38628833_38628936_38636450_38636598_38638745_38638823_38639654_38639725_38645562_38645646_38650026_38650263_38656119
transcript_138130.known	chr22	-	10087	17	FSM	ENSG00000184949.18	ENST00000535113.7	10087	17	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	2.11301768804712	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTATTTATTTCATTAT	NA	False	NA	-6	True	AATAAA	-18	NA	38656392	38578117	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38586200_38591434_38591541_38597203_38597357_38599763_38599922_38605253_38605349_38607388_38607477_38620211_38620292_38623171_38623280_38626179_38626304_38628237_38628343_38628833_38628936_38636450_38636598_38638745_38638823_38639654_38639725_38645562_38645646_38650026_38650263_38656119
transcript_138148.known	chr22	+	1269	6	FSM	ENSG00000100211.11	ENST00000396811.6	1269	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	125.789665712252	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATCTCTCTGTGACCAAA	38653011	True	NA	10	True	ATTAAA	-10	NA	38656650	38673846	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_38656751_38665545_38665686_38668016_38668133_38670883_38670990_38671069_38671189_38673158
transcript_13815.nic	chr1	-	2366	11	NIC	ENSG00000143390.18	novel	2459	11	NA	NA	-39	-3	intron_retention	FALSE	canonical	0	0	junction_9	100.207983713874	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCTGTATTCCCTGTGCT	-151346872	False	NA	-8	True	AATAAA	-13	NA	151346911	151341962	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_151343179_151343341_151343443_151343680_151343883_151344196_151344279_151344416_151344537_151344727_151344848_151345105_151345189_151345927_151345962_151346204_151346334_151346484_151346607_151346754
transcript_138150.nnic	chr22	+	1330	6	NIC	ENSG00000100211.11	novel	1269	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_2	140.020569917423	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATCTCTCTGTGACCAAA	38652998	True	NA	10	True	ATTAAA	-10	NA	38656637	38673846	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_38656751_38656955_38657144_38668016_38668133_38670883_38670990_38671069_38671189_38673158
transcript_138151.known	chr22	+	1133	5	FSM	ENSG00000100211.11	ENST00000216029.8	1146	5	17	-4	4	4	multi-exon	FALSE	canonical	3	305	junction_2	5.2618912949623	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTGACCAAAGTGACTAA	38653015	True	NA	18	True	ATTAAA	-18	NA	38656654	38673854	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_38656751_38668016_38668133_38670883_38670990_38671069_38671189_38673158
transcript_138156.known	chr22	+	2031	4	FSM	ENSG00000100216.6	ENST00000216034.6	2031	4	0	0	0	0	multi-exon	FALSE	canonical	3	1368	junction_2	66.6399946645323	709	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAGAGACATCTTTTGAA	38656578	True	NA	8	True	ATTAAA	-16	NA	38681956	38685421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_38682096_38682322_38682442_38682878_38682997_38683766
transcript_138159.nnic	chr22	-	3172	5	NIC	ENSG00000100221.11	novel	3743	5	NA	NA	-2	-78	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	9.24662100445346	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATGTCTCCTTGTCTGCC	-38699633	True	NA	-16	True	ATTAAA	-15	NA	38700945	38685620	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_38688002_38688934_38689130_38689295_38689425_38699802_38700124_38700799
transcript_138162.known	chr22	-	3743	5	FSM	ENSG00000100221.11	ENST00000683374.1	3743	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	9.65336728815391	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATTGCCAGCGTAAGTC	-38699631	True	NA	-4	True	AATAAA	-28	NA	38700943	38685542	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38688002_38688934_38689130_38689295_38689425_38699802_38700619_38700799
transcript_138165.known	chr22	-	3648	4	FSM	ENSG00000100221.11	ENST00000216039.9	3648	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	3.74165738677394	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATTGCCAGCGTAAGTC	-38700640	False	82	-4	True	AATAAA	-28	NA	38700667	38685542	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38688002_38688934_38689130_38689295_38689425_38699802
transcript_138169.nic	chr22	-	4057	19	NIC	ENSG00000100242.16	novel	4055	19	NA	NA	-32	0	combination_of_known_junctions	TRUE	canonical	3	17	junction_18	19.144109109077	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTGGGATGTGGCTTT	-38754604	True	NA	-38	True	AATAAA	-11	NA	38756032	38734735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_38736381_38738172_38738266_38738586_38738755_38738872_38738989_38739341_38739427_38739721_38739944_38740266_38740433_38741006_38741051_38741493_38741572_38742300_38742556_38745683_38745812_38748712_38748784_38749765_38749860_38750224_38750321_38750897_38751036_38751209_38751374_38752506_38752666_38754641_38754707_38755762
transcript_138172.nic	chr22	-	3992	18	FSM	ENSG00000100242.16	ENST00000689035.1	3960	18	-34	2	-32	0	multi-exon	FALSE	canonical	3	52	junction_17	10.0228113523524	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTGGGATGTGGCTTT	-38754604	True	NA	-38	True	AATAAA	-11	NA	38756032	38734735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38736381_38738172_38738266_38738586_38738755_38738872_38738989_38739341_38739427_38739721_38739944_38740266_38740433_38741006_38741051_38741493_38741572_38742300_38742556_38745683_38745812_38748712_38748784_38749765_38749860_38750224_38750321_38750897_38751036_38751209_38751374_38752506_38752666_38755762
transcript_138190.known	chr22	+	4905	12	FSM	ENSG00000100226.16	ENST00000216044.10	4905	12	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	17.5074954432156	264	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAAGGCCTGACCCTTCT	38701608	True	NA	23	True	AATAAA	-24	NA	38705943	38733587	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_38706148_38708844_38708957_38715906_38716088_38716651_38717001_38721741_38721866_38724296_38724412_38726005_38726151_38726257_38726441_38727212_38727349_38727982_38728162_38729461_38729663_38730611
transcript_138199.known	chr22	-	1474	4	FSM	ENSG00000100246.13	ENST00000216068.9	1474	4	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	0.471404520791032	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATTCTACAGTCTCTTG	-38793065	True	NA	-6	True	ATTAAA	-16	NA	38794143	38778507	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38779614_38780925_38781010_38782662_38782871_38794067
transcript_138206.nnic	chr22	-	2899	6	NNC	ENSG00000183741.12	novel	6052	5	NA	NA	-31	9	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	14.6342065039414	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAAAAAAATATTGTGGGA	-38868396	True	NA	NA	False	AAAAAG	-18	NA	38872280	38864219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_38866647_38867065_38867202_38871479_38871547_38871691_38871758_38871901_38871946_38872121
transcript_13821.nic	chr1	-	3880	10	NIC	ENSG00000143390.18	novel	3576	11	NA	NA	-39	0	intron_retention	FALSE	canonical	0	0	junction_8	105.58525897861	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTTTGTGTTCCTCCCT	-151346872	False	NA	0	True	ATTAAA	-16	NA	151346911	151340639	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_151343179_151343341_151343443_151343680_151343883_151344196_151344279_151344416_151344848_151345105_151345189_151345927_151345962_151346204_151346334_151346484_151346607_151346754
transcript_138212.nnic	chr22	-	2768	6	NNC	ENSG00000183741.12	novel	6052	5	NA	NA	-87	-120	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	12.7968746184371	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAGTTCGTGTCATTCGT	-38868452	True	NA	-4	True	NA	NA	NA	38872336	38864348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_38865792_38866268_38867202_38871479_38871547_38871691_38871758_38871901_38871946_38872121
transcript_138213.known	chr22	-	6052	5	FSM	ENSG00000183741.12	ENST00000407418.8	6052	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	6.04152298679729	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGACTGGCTTTTCAAA	-38868332	True	NA	29	True	NA	NA	NA	38872216	38861421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38867202_38871479_38871547_38871691_38871758_38871901_38871946_38872121
transcript_138214.known	chr22	-	3191	5	FSM	ENSG00000183741.12	ENST00000216083.6	3191	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	15.833114033569	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAATAGAAAAAAAT	-38868332	True	NA	NA	False	AAAAAG	-9	NA	38872216	38864228	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38867148_38871479_38871547_38871691_38871758_38871901_38871946_38872121
transcript_138218.known	chr22	-	2213	4	FSM	ENSG00000183741.12	ENST00000469420.1	2213	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	2.05480466765633	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAATAATATATAGA	-38868365	True	NA	NA	False	NA	NA	NA	38872249	38869571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38871547_38871691_38871758_38871901_38871946_38872121
transcript_138219.known	chr22	+	1590	8	FSM	ENSG00000179750.16	ENST00000333467.4	1590	8	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_5	7.77751862218069	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAATGTGTAGATGTCTTT	38981923	True	NA	26	True	AATAAA	-39	NA	38982346	38992779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_38982471_38984074_38984232_38985811_38986092_38986297_38986413_38989456_38989611_38991331_38991627_38992033_38992150_38992430
transcript_138221.known	chr22	+	1359	7	FSM	ENSG00000179750.16	ENST00000335760.9	1359	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	24.1292814278051	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTCCACAAACACTAGC	38981982	True	NA	8	True	AATAAA	-21	NA	38982405	38992761	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_38982471_38984074_38984232_38985811_38986092_38986297_38986413_38991331_38991627_38992033_38992150_38992430
transcript_138225.known	chr22	-	691	5	FSM	ENSG00000249310.2	ENST00000513758.2	691	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	1.92028643696715	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTCGTAATCATAGATGCG	NA	False	NA	NA	False	NA	NA	NA	38998209	38991558	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_38991619_38992397_38992582_38992937_38993004_38997480_38997738_38998085
transcript_138232.known	chr22	+	2515	7	FSM	ENSG00000243811.12	ENST00000216099.13	2515	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	13.6106575888162	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTGAGAAACATCCTTTG	39021105	True	NA	24	True	AATATA	-17	NA	39021126	39033277	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_39021537_39022821_39023015_39025069_39025350_39025556_39025672_39029362_39029520_39031693_39031974_39032197
transcript_138234.known	chr22	+	2644	4	FSM	ENSG00000244509.4	ENST00000361441.5	2644	4	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_1	49.2702299117383	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTGTGTAATTTGTAGG	39011829	True	NA	12	True	AATAAA	-19	NA	39014256	39020352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_39014380_39015594_39015752_39017765_39018046_39018268
transcript_138235.known	chr22	+	1056	3	FSM	ENSG00000244509.4	ENST00000428892.1	1056	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	168.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTGGAGTGAACAGAGATC	39011834	True	NA	NA	False	NA	NA	NA	39014261	39018926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_39014380_39017765_39018046_39018268
transcript_138237.known	chr22	+	4496	7	FSM	ENSG00000128394.17	ENST00000308521.10	4496	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	13.5820551545862	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTCTGAGAGGTTTTG	39040848	False	NA	10	True	ATTAAA	-19	NA	39040863	39055972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_39040978_39042936_39043091_39044940_39045221_39045427_39045543_39049424_39049582_39052073_39052354_39052576
transcript_138242.known	chr22	+	1564	8	FSM	ENSG00000239713.9	ENST00000407997.4	1564	8	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	12.5095881594226	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCCCTGTGTGATTG	39077230	False	NA	14	True	AATAAA	-24	NA	39077274	39087743	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_39077379_39078931_39079086_39080932_39081228_39081470_39081586_39083730_39083885_39086278_39086568_39087010_39087127_39087406
transcript_138244.known	chr22	-	784	6	FSM	ENSG00000100307.13	ENST00000401405.7	784	6	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_2	6.11228271597445	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGGGAGTTAAAGGAGCA	-39152377	False	25	NA	False	NA	NA	NA	39152444	39133583	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_39134049_39134400_39134474_39138635_39138703_39141370_39141437_39149788_39149833_39152375
transcript_138245.known	chr22	-	4111	6	FSM	ENSG00000100307.13	ENST00000216133.10	4111	6	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	4.58693797647189	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGGGCATTTGATTATT	-39152613	False	NA	NA	False	ATTAAA	-33	NA	39152680	39130771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_39134049_39134400_39134753_39138635_39138703_39141370_39141437_39149788_39149833_39152375
transcript_138248.known	chr22	-	3014	2	FSM	ENSG00000100307.13	ENST00000482294.1	3014	2	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-39152607	False	NA	NA	False	NA	NA	NA	39152674	39147117	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_39149833_39152375
transcript_138255.known	chr22	-	3728	7	FSM	ENSG00000100311.17	ENST00000331163.11	3728	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	4.11298755975102	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGGGTCTCCATAGAGG	-39244481	True	NA	NA	False	NA	NA	NA	39244982	39223358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_39225314_39225694_39225848_39230083_39230229_39231621_39231828_39233434_39233525_39235777_39235875_39243900
transcript_138269.known	chr22	-	1296	10	FSM	ENSG00000100316.16	ENST00000216146.9	1296	10	0	0	0	0	multi-exon	FALSE	canonical	3	22290	junction_9	5404.97071176725	11863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCCTCTTTCTTCAGGA	-38740323	True	NA	-1	True	AATAAA	-19	NA	39319623	39312881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_39312985_39313190_39313311_39313633_39313730_39314106_39314209_39314685_39314847_39315368_39315556_39316705_39316842_39317460_39317630_39318399_39318593_39319594
transcript_138275.known	chr22	-	2108	10	FSM	ENSG00000100316.16	ENST00000465618.5	2108	10	0	0	0	0	multi-exon	FALSE	canonical	2	172	junction_7	15278.4201481116	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTGCCTCTTTCTTCAG	-39320081	False	NA	-3	True	AATAAA	-17	NA	39320389	39312883	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_39312985_39313190_39313311_39313633_39313730_39314106_39314209_39314685_39314847_39315368_39315556_39316705_39317022_39317460_39317630_39318399_39318593_39319726
transcript_1383.nnic	chr1	+	2442	18	NNC	ENSG00000067606.17	novel	2385	18	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	38.0765028489244	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTCTGATGCCTTTTTT	2047368	True	NA	25	True	AATAAA	-20	NA	2050377	2185395	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_2050702_2055440_2055563_2056483_2056574_2059540_2059592_2135261_2135348_2144209_2144342_2146026_2146109_2148871_2148925_2150789_2150979_2155994_2156093_2169493_2169605_2172054_2172191_2172300_2172389_2173896_2174017_2174753_2174834_2175223_2175314_2184582_2184699_2184921
transcript_13833.known	chr1	-	3570	11	FSM	ENSG00000143390.18	ENST00000452671.7	3570	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	89.508044331222	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTTTGTGTTCCTCCCT	-151344051	True	NA	0	True	ATTAAA	-16	NA	151347252	151340639	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151343179_151343341_151343443_151343680_151343883_151344196_151344279_151344416_151344537_151344727_151344848_151345105_151345189_151345927_151345962_151346204_151346334_151346488_151346607_151347210
transcript_13834.known	chr1	-	1722	12	FSM	ENSG00000143416.21	ENST00000368868.10	1722	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	67.1189889501172	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGCCTTGTCTTTGGGGG	-151371825	True	NA	-4	True	AATAAA	-20	NA	151372705	151364303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151364706_151364925_151365045_151365188_151365282_151365562_151365685_151365767_151365847_151366274_151366454_151366721_151366905_151368198_151368320_151369003_151369190_151369441_151369555_151369712_151369770_151372637
transcript_138343.known	chr22	-	1205	8	FSM	ENSG00000100316.16	ENST00000402527.5	1205	8	0	0	0	0	multi-exon	FALSE	canonical	3	1142	junction_7	12705.9438669868	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGACCAATGACTTTGTCA	-38740323	True	NA	NA	False	NA	NA	NA	39319623	39313706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_39313730_39314106_39314209_39314685_39314847_39315368_39315556_39316705_39316842_39317460_39317630_39318399_39318593_39319389
transcript_138355.known	chr22	+	1361	4	FSM	ENSG00000100321.15	ENST00000318801.8	1361	4	0	0	0	0	multi-exon	TRUE	canonical	3	444	junction_3	32.8667342798493	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTCATTCTTCTCTCCA	39349903	False	NA	17	True	AATAAA	-31	NA	39349924	39378389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_39350110_39374315_39374554_39376051_39376198_39377597
transcript_138357.known	chr22	+	4383	4	FSM	ENSG00000100321.15	ENST00000328933.10	4383	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	211.950203795346	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGATTGCAAGTGTGTC	39345076	True	NA	16	True	AATAAA	-19	NA	39349990	39385575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_39350110_39374315_39374554_39376051_39376198_39381695
transcript_138364.known	chr22	+	928	4	FSM	ENSG00000100321.15	ENST00000415332.1	928	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	228.391476782008	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTTGTGCCTAGTGAT	39345072	True	NA	6	True	AGTAAA	-14	NA	39349986	39377911	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_39350110_39374315_39374661_39376051_39376198_39377597
transcript_138367.nic	chr22	+	2275	3	ISM	ENSG00000100321.15	ENST00000318801.8	1361	4	5	481	5	-3	intron_retention	FALSE	canonical	3	459	junction_2	30.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTGTTTTGTGCCTAGT	39349908	False	NA	3	True	AGTAAA	-11	NA	39349929	39377908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_39350110_39374315_39374554_39376051
transcript_138370.nic	chr22	+	2376	3	NIC	ENSG00000100321.15	novel	928	4	NA	NA	5	0	intron_retention	FALSE	canonical	3	444	junction_2	38	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTTGTGCCTAGTGAT	39349908	False	NA	6	True	AGTAAA	-14	NA	39349929	39377911	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_39350110_39374315_39376198_39377597
transcript_138372.known	chr22	+	1999	2	FSM	ENSG00000100321.15	ENST00000489206.1	1999	2	0	0	0	0	multi-exon	FALSE	canonical	3	520	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCGCACCAGCCCACACTC	39345091	True	NA	NA	False	NA	NA	NA	39350005	39376210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_39350110_39374315
transcript_13838.known	chr1	-	1922	11	FSM	ENSG00000143416.21	ENST00000463664.5	1922	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	68.5991253588557	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGGAGGCACCAAGAAATA	-151371814	True	NA	-45	True	NA	NA	NA	151372694	151364344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151364706_151364925_151365045_151365188_151365282_151365562_151365685_151365767_151365847_151366274_151366454_151366721_151366905_151368198_151368320_151369003_151369555_151369712_151369770_151372637
transcript_138383.known	chr22	+	3198	11	FSM	ENSG00000100324.14	ENST00000216160.11	3198	11	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_6	13.499629624549	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCGCTGTTGCTCATGTTT	39395779	True	NA	15	True	AATAAA	-28	NA	39399779	39431882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_39399836_39415005_39415143_39415499_39415654_39416790_39416878_39417710_39417850_39418731_39418846_39419518_39419631_39421826_39421972_39426702_39426926_39428020_39428184_39430014
transcript_138384.nnic	chr22	+	2510	11	NNC	ENSG00000100324.14	novel	3198	11	NA	NA	-2	-1529	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	28.8138855415232	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGCTGTGTCAATCCTG	39395775	True	NA	3	True	AATAAA	-13	NA	39399775	39435294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_+_39399836_39415005_39415143_39415499_39415654_39416790_39416878_39417710_39417850_39418731_39418846_39419518_39419631_39421826_39421972_39426702_39426926_39428020_39428184_39434118
transcript_138385.known	chr22	+	1660	11	FSM	ENSG00000100324.14	ENST00000331454.3	1660	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	28.5455775909334	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTGAGCTCAGGGCTCT	39395783	True	NA	NA	False	NA	NA	NA	39399783	39436823	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_39399836_39415005_39415143_39415499_39415654_39416790_39416878_39417710_39417850_39418731_39418846_39419518_39419631_39421826_39421972_39426702_39426926_39428020_39428184_39436489
transcript_138391.known	chr22	+	5394	2	FSM	ENSG00000128268.12	ENST00000341184.7	5394	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGCATGTGTGGCCGG	NA	False	NA	19	True	AATAAA	-20	NA	39457011	39492194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_39457558_39487346
transcript_138392.known	chr22	+	5688	6	FSM	ENSG00000100335.15	ENST00000325301.7	5688	6	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_4	31.6328942716281	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGACTTGTGTGTGTCG	39498175	True	NA	6	True	AATAAA	-17	NA	39502289	39518132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_39502438_39504202_39504535_39511287_39511439_39511848_39512027_39512231_39512495_39513516
transcript_138393.known	chr22	+	3797	7	FSM	ENSG00000100335.15	ENST00000404569.5	3797	7	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_2	62.9091055059246	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTATGCCTGAGTACCAT	39498262	True	NA	NA	False	NA	NA	NA	39502376	39516178	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_39502438_39504202_39504535_39509421_39509572_39511287_39511439_39511848_39512027_39512231_39512495_39513516
transcript_138395.known	chr22	+	1379	7	FSM	ENSG00000100335.15	ENST00000428069.1	1379	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	63.6701569723908	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCATCAGTGACCCTCG	39498282	True	NA	NA	False	NA	NA	NA	39502396	39513866	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_39502438_39504202_39504535_39509421_39509572_39511287_39511439_39511848_39512027_39512317_39512495_39513516
transcript_13840.known	chr1	-	1530	11	FSM	ENSG00000143416.21	ENST00000447402.7	1530	11	0	0	0	0	multi-exon	FALSE	canonical	1	21	junction_8	62.581546800954	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGGCCTTGTCTTTGGGG	-151371820	True	NA	-5	True	AATAAA	-19	NA	151372700	151364304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151364706_151364925_151365045_151365188_151365282_151365562_151365685_151365767_151365847_151366274_151366454_151366721_151366905_151368198_151368320_151369441_151369555_151369712_151369770_151372637
transcript_138405.known	chr22	+	3838	6	FSM	ENSG00000100335.15	ENST00000433117.6	3838	6	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_4	43.1295722213889	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGCATCTCTGACCAAAT	39498187	True	NA	8	True	ATTAAA	-20	NA	39502301	39516380	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_39502438_39504202_39504535_39511287_39511439_39511848_39512027_39512317_39512495_39513516
transcript_138412.known	chr22	+	2019	2	FSM	ENSG00000128272.18	ENST00000337304.2	2019	2	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTGTGCGTTTGAATTC	39497471	True	NA	29	True	AATAAA	-17	NA	39520563	39522683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_39521672_39521772
transcript_138415.known	chr22	-	861	5	FSM	ENSG00000187051.9	ENST00000420879.5	861	5	0	0	0	0	multi-exon	FALSE	canonical	1	19	junction_2	423.869304739091	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGACAGCTCCAGGAGTAGG	-39519396	True	NA	-88	True	NA	NA	NA	39532761	39529155	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_39529624_39529819_39529918_39530463_39530555_39532394_39532524_39532686
transcript_13842.known	chr1	-	2128	10	FSM	ENSG00000143416.21	ENST00000470345.5	2128	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	71.9878247593317	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGATGGCCTTGTCTTT	-151371826	True	NA	-9	True	AATAAA	-15	NA	151372706	151364308	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151364706_151364925_151365045_151365188_151365282_151365562_151365685_151365767_151365847_151366274_151366454_151366721_151366905_151368198_151368320_151369003_151369770_151372637
transcript_138420.known	chr22	-	820	4	FSM	ENSG00000187051.9	ENST00000334678.8	820	4	0	0	0	0	multi-exon	FALSE	canonical	3	722	junction_3	123.104291828785	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTTGCTGCTGGTCT	-39519383	True	NA	-25	True	AATAAA	-14	NA	39532748	39529092	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_39529624_39529819_39529918_39532394_39532524_39532686
transcript_138422.known	chr22	-	647	3	FSM	ENSG00000187051.9	ENST00000491966.1	647	3	0	0	0	0	multi-exon	FALSE	canonical	3	722	junction_2	128	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACTCCTGCTGGCTCCAGG	-39519367	True	NA	NA	False	NA	NA	NA	39532732	39529445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_39529918_39532394_39532524_39532686
transcript_138425.known	chr22	+	15561	5	FSM	ENSG00000133477.17	ENST00000333407.11	15561	5	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_3	4.86698058348295	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTCTGTCTCTCTCTTT	39993254	True	NA	10	True	AATAAA	-20	NA	39994953	40043534	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_39995532_40019167_40019336_40019886_40020009_40021289_40021964_40029515
transcript_138433.nic	chr22	+	5885	22	NIC	ENSG00000100354.21	novel	18280	23	NA	NA	-19	205	combination_of_known_junctions	FALSE	canonical	3	26	junction_6	14.1970262926979	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTTCTAGTTTTTCACT	40170611	True	NA	3	True	ATTAAA	-5	NA	40177905	40323565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_40178141_40246014_40246103_40251178_40251201_40261831_40262174_40264687_40267037_40270121_40270281_40273424_40273601_40277076_40277152_40277998_40278045_40279994_40280144_40285644_40285771_40300454_40300587_40300909_40301006_40301149_40301334_40308511_40308650_40310816_40310994_40312504_40312652_40312901_40312998_40315282_40315508_40315941_40316013_40321089_40321230_40322853
transcript_138434.nic	chr22	+	6128	22	NIC	ENSG00000100354.21	novel	18280	23	NA	NA	-19	448	combination_of_known_junctions	FALSE	canonical	3	26	junction_6	14.1970262926979	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGATTGGCTGGTTGAT	40170611	True	NA	NA	False	AAAAAG	-8	NA	40177905	40323808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_40178141_40246014_40246103_40251178_40251201_40261831_40262174_40264687_40267037_40270121_40270281_40273424_40273601_40277076_40277152_40277998_40278045_40279994_40280144_40285644_40285771_40300454_40300587_40300909_40301006_40301149_40301334_40308511_40308650_40310816_40310994_40312504_40312652_40312901_40312998_40315282_40315508_40315941_40316013_40321089_40321230_40322853
transcript_138437.known	chr22	+	17933	21	FSM	ENSG00000100354.21	ENST00000335727.13	17933	21	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	13.8470213403461	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTATTGTGGTTTCCTG	40170647	True	NA	6	True	AATAAA	-20	NA	40177941	40335808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_40178141_40246014_40246103_40251178_40251201_40261831_40262174_40264687_40267037_40273424_40273601_40277076_40277152_40277998_40278045_40279994_40280144_40285644_40285771_40300454_40300587_40300909_40301006_40301149_40301334_40308511_40308650_40310816_40310994_40312504_40312652_40312901_40312998_40315282_40315508_40315941_40316013_40321089_40321230_40322853
transcript_138444.nnic	chr22	+	3620	20	NIC	ENSG00000100354.21	novel	17933	21	NA	NA	-19	448	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	17.2668481293295	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGATTGGCTGGTTGAT	40170611	True	NA	NA	False	AAAAAG	-8	NA	40177905	40323808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_40178141_40246014_40246103_40251178_40251201_40261831_40262174_40273424_40273601_40277076_40277152_40277998_40278045_40279994_40280144_40285644_40285771_40300454_40300587_40300909_40301006_40301149_40301334_40308511_40308650_40310816_40310994_40312504_40312652_40312901_40312998_40315282_40315508_40315941_40316013_40321089_40321230_40322853
transcript_138452.nic	chr22	+	964	5	ISM	ENSG00000100354.21	ENST00000301923.13	15958	24	-476	89720	-476	-275	5prime_fragment	FALSE	canonical	2	10	junction_1	1.4790199457749	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCCACTCAGAAGGTAGG	40044258	True	NA	66	True	GATAAA	-10	NA	40044340	40246087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_40044999_40117054_40117129_40125771_40125863_40156114_40156183_40246014
transcript_138454.nic	chr22	+	1354	5	ISM	ENSG00000100354.21	ENST00000454349.7	18280	23	-19	70454	-19	18992	5prime_fragment	FALSE	canonical	3	48	junction_2	2.8613807855649	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAACACTAACTCCTTGA	40170611	True	NA	NA	False	NA	NA	NA	40177905	40265354	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_40178141_40246014_40246103_40251178_40251201_40261831_40262174_40264687
transcript_138455.nic	chr22	+	1573	5	ISM	ENSG00000100354.21	ENST00000454349.7	18280	23	-19	70235	-19	19211	5prime_fragment	FALSE	canonical	3	48	junction_2	2.8613807855649	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATGGAAAAGAGAGAGAGG	40170611	True	NA	NA	False	NA	NA	NA	40177905	40265573	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_40178141_40246014_40246103_40251178_40251201_40261831_40262174_40264687
transcript_138458.known	chr22	+	564	2	FSM	ENSG00000100354.21	ENST00000489500.1	564	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTAGTAGAGATGGGG	40170630	True	NA	NA	False	NA	NA	NA	40177924	40246362	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_40178141_40246014
transcript_138463.known	chr22	-	4522	15	FSM	ENSG00000196588.21	ENST00000355630.10	4522	15	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_13	19.5235336798167	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTAGTCCATCTTATT	-40632156	True	NA	-24	True	AATAAA	-14	NA	40636719	40410288	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_40411908_40416985_40417047_40417340_40417494_40418373_40419385_40420404_40420577_40420846_40421101_40423535_40423686_40424205_40424382_40429605_40429768_40431404_40431481_40435498_40435555_40463220_40463287_40552105_40552368_40594673_40594736_40636477
transcript_138465.nic	chr22	-	4491	14	NIC	ENSG00000196588.21	novel	4522	15	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_13	19.2012080487803	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTGTTAGTCCATCTTAT	-40632188	True	NA	-25	True	AATAAA	-13	NA	40636751	40410289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_40411908_40416985_40417047_40417340_40417494_40418373_40419385_40420404_40420577_40420846_40421101_40423535_40423686_40424205_40424382_40429605_40429768_40431404_40431481_40435498_40435555_40463220_40463287_40552105_40552368_40636477
transcript_138469.known	chr22	-	4343	14	FSM	ENSG00000196588.21	ENST00000402042.7	4343	14	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_6	26.5719966490507	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTGTTAGTCCATCTTAT	-40632128	True	NA	-25	True	AATAAA	-13	NA	40636691	40410289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_40411908_40416985_40417047_40417340_40417494_40418373_40419385_40420404_40420577_40420846_40421101_40424205_40424382_40429605_40429768_40431404_40431481_40435498_40435555_40463220_40463287_40552105_40552368_40594673_40594736_40636477
transcript_138482.known	chr22	+	2986	22	FSM	ENSG00000100359.21	ENST00000248929.14	2986	22	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_19	44.7005658752678	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTTTGTGTTTATTTT	40364536	True	NA	9	True	NA	NA	NA	40370593	40410289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_40370689_40400695_40400814_40401592_40401676_40402138_40402206_40404246_40404456_40404556_40404665_40405140_40405285_40405648_40405845_40406077_40406224_40406437_40406663_40407016_40407072_40407200_40407329_40407412_40407569_40407788_40407844_40408070_40408121_40408276_40408430_40408626_40408698_40408793_40408843_40408932_40409019_40409249_40409373_40409464_40409526_40409681
transcript_138498.nic	chr22	+	3066	21	NIC	ENSG00000100359.21	novel	2986	22	NA	NA	-27	0	intron_retention	TRUE	canonical	3	295	junction_2	41.5239689817821	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCTACCTGTCTTCTGTG	40364506	True	NA	21	True	AATAAA	-21	NA	40370563	40410108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_40370689_40400695_40400814_40401592_40401676_40402138_40402206_40404246_40404456_40404556_40404665_40405140_40405285_40405648_40405845_40406077_40406224_40406437_40406663_40407016_40407072_40407200_40407329_40407412_40407569_40407788_40407844_40408070_40408121_40408276_40408430_40408626_40408698_40408793_40408843_40408932_40409373_40409464_40409526_40409681
transcript_1385.known	chr1	+	2385	18	FSM	ENSG00000067606.17	ENST00000378567.8	2385	18	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_11	14.4109243452469	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTCTGATGCCTTTTTT	2047401	True	NA	25	True	AATAAA	-20	NA	2050410	2185395	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_2050702_2055440_2055563_2056483_2056574_2059540_2059592_2135261_2135348_2144209_2144342_2146026_2146109_2148871_2148925_2150789_2150979_2155994_2156093_2169517_2169605_2172054_2172191_2172300_2172389_2173896_2174017_2174753_2174834_2175223_2175314_2184582_2184699_2184921
transcript_13850.known	chr1	+	918	7	FSM	ENSG00000159377.11	ENST00000290541.7	918	7	0	0	0	0	multi-exon	FALSE	canonical	3	1514	junction_6	70.1205311509325	796	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGAGTGGTTTTTGTCT	151391287	True	NA	14	True	AATAAA	-14	NA	151399572	151401937	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151399728_151399980_151400188_151400441_151400589_151400763_151400846_151401238_151401356_151401541_151401631_151401816
transcript_138528.nic	chr22	+	2752	21	NIC	ENSG00000100359.21	novel	2986	22	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	114	junction_2	70.6978783274293	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCTACCTGTCTTCTGTG	40364506	True	NA	21	True	AATAAA	-21	NA	40370563	40410108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_40370689_40400695_40400814_40402138_40402206_40404246_40404456_40404556_40404665_40405140_40405285_40405648_40405845_40406077_40406224_40406437_40406663_40407016_40407072_40407200_40407329_40407412_40407569_40407788_40407844_40408070_40408121_40408276_40408430_40408626_40408698_40408793_40408843_40408932_40409019_40409249_40409373_40409464_40409526_40409681
transcript_138547.known	chr22	+	2973	20	FSM	ENSG00000100359.21	ENST00000485962.5	2973	20	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_17	45.5976016281364	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCTACCTGTCTTCTGTG	40364581	True	NA	21	True	AATAAA	-21	NA	40370638	40410108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_40370689_40400695_40400814_40401592_40401676_40402138_40402206_40404246_40404456_40404556_40404665_40405140_40405285_40405648_40405845_40406077_40406224_40406437_40406663_40407016_40407569_40407788_40407844_40408070_40408121_40408276_40408430_40408626_40408698_40408793_40408843_40408932_40409019_40409249_40409373_40409464_40409526_40409681
transcript_13862.known	chr1	-	6655	19	FSM	ENSG00000143442.22	ENST00000271715.7	6655	19	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_18	20.0660175851711	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGTTGAGACTGAATG	-151459280	True	NA	-1	True	AATAAA	-20	NA	151459494	151402723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151406465_151406606_151406632_151406910_151407024_151407234_151407292_151408099_151408241_151408408_151408582_151408693_151408829_151411624_151411772_151412295_151412397_151423396_151423552_151423948_151424287_151424954_151425062_151427822_151428042_151428122_151428414_151429602_151429712_151430665_151430842_151440927_151441087_151442080_151442206_151459151
transcript_13863.known	chr1	-	4813	19	FSM	ENSG00000143442.22	ENST00000409503.5	4813	19	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_13	29.9886809922397	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAGTCCCACTGAAC	-151458965	False	214	-17	True	TATAAA	-11	NA	151459179	151404223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151406465_151406606_151406632_151406910_151407024_151407234_151407292_151408099_151408241_151408408_151408582_151408693_151408829_151411624_151411772_151412295_151412397_151423396_151423552_151423948_151424287_151424954_151425062_151427822_151428015_151428122_151428414_151429602_151429712_151430665_151430842_151440927_151441087_151442080_151442206_151459151
transcript_138633.known	chr22	+	1859	14	FSM	ENSG00000239900.14	ENST00000680978.1	1859	14	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_13	332.748567942006	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCCTAAACTAGAGGAAAAA	40335240	True	NA	-41	True	NA	NA	NA	40346499	40367837	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361636_40362980_40363072_40364275_40364366_40364879_40365057_40366435_40366499_40367468
transcript_138639.known	chr22	+	4359	13	FSM	ENSG00000239900.14	ENST00000623063.3	4359	13	0	0	0	0	multi-exon	FALSE	canonical	3	1098	junction_11	89.9979938048004	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGGTCTGCGTGTTCAC	40335240	True	NA	10	True	NA	NA	NA	40346499	40369367	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361636_40362980_40363072_40364275_40364366_40364879_40365057_40366435
transcript_138640.known	chr22	+	1682	13	FSM	ENSG00000239900.14	ENST00000637666.2	1682	13	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_12	433.9480495661	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCCTAAACTAGAGGAAAAA	40335240	True	NA	-41	True	NA	NA	NA	40346499	40367837	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361636_40362980_40363072_40364275_40364366_40366435_40366499_40367468
transcript_138642.known	chr22	+	2002	13	FSM	ENSG00000239900.14	ENST00000625194.4	2002	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	347.797314857694	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGTAAATACTTAAAAAAAAA	40335240	True	NA	NA	False	NA	NA	NA	40346499	40366968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361678_40362980_40363072_40364275_40364366_40364879_40365057_40366435
transcript_138645.known	chr22	+	1808	12	FSM	ENSG00000239900.14	ENST00000342312.9	1808	12	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_11	315.301718285389	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCAAACCCTGATGTGAC	40335243	True	NA	NA	False	AGTAAA	-23	NA	40346502	40366996	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361636_40362980_40363072_40364275_40364366_40366435
transcript_138649.known	chr22	+	4372	12	FSM	ENSG00000239900.14	ENST00000679723.1	4372	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	358.500273753022	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATAAAATATACATTCAT	40335240	True	NA	68	True	ATTAAA	-17	NA	40346499	40369425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_40346712_40349831_40350036_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361636_40362980_40363072_40364275_40364366_40364879_40365057_40366435
transcript_138654.known	chr22	+	1805	11	FSM	ENSG00000239900.14	ENST00000623287.4	1805	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	378.089407415759	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGTAAATACTTAAAAAAAAA	40335270	True	NA	NA	False	NA	NA	NA	40346529	40366968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_40346712_40349831_40350036_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361636_40362980_40363072_40364275_40364366_40364879_40365057_40366435
transcript_138658.known	chr22	+	1336	10	FSM	ENSG00000239900.14	ENST00000623632.4	1336	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_7	390.808784666926	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTAAATTAGTACAGCACT	NA	False	NA	74	True	NA	NA	NA	40346460	40366614	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40364275_40364366_40364879_40365057_40366435
transcript_138664.known	chr22	+	2123	13	FSM	ENSG00000239900.14	ENST00000680444.1	2123	13	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_7	346.366215955823	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAACTACAGTAAATACTTA	40335254	True	NA	NA	False	NA	NA	NA	40346513	40366960	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361087_40361343_40361487_40361636_40362980_40363072_40364275_40364366_40364879_40365057_40366435
transcript_138665.known	chr22	+	260	2	FSM	ENSG00000172912.4	ENST00000312310.3	260	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAACTGGCTCCACCCCA	NA	False	NA	NA	False	NA	NA	NA	40569285	40569895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_40569433_40569782
transcript_138666.known	chr22	+	2851	2	FSM	ENSG00000128285.5	ENST00000249016.5	2115	2	-734	-2	-523	2	multi-exon	FALSE	canonical	2	5	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCTGGATGTTCTTGTG	NA	False	NA	17	True	AATAAA	-29	NA	40678749	40682814	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_40679735_40680948
transcript_138671.known	chr22	-	2226	9	FSM	ENSG00000100372.15	ENST00000435456.7	2226	9	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_7	28.66372925842	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGTCGTATGTCATCTT	-40814922	True	NA	-2	True	ATTAAA	-18	NA	40819346	40769629	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_40770982_40773936_40774020_40777039_40777136_40777227_40777374_40779008_40779126_40792524_40792677_40794513_40794581_40799022_40799084_40819194
transcript_138678.known	chr22	-	2058	8	FSM	ENSG00000100372.15	ENST00000263255.10	2058	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	138.416997894487	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGTCGTATGTCATCTT	-40814906	True	NA	-2	True	ATTAAA	-18	NA	40819330	40769629	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_40770982_40773936_40774020_40777039_40777136_40777227_40777374_40779008_40779126_40794513_40794581_40799022_40799084_40819194
transcript_138685.known	chr22	-	2060	7	FSM	ENSG00000100372.15	ENST00000544408.5	2060	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	141.236700455496	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGTCGTATGTCATCTT	-40814975	True	NA	-2	True	ATTAAA	-18	NA	40819399	40769629	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_40770982_40773936_40774020_40777039_40777136_40777227_40777374_40779008_40779126_40799022_40799084_40819194
transcript_138686.known	chr22	-	1243	7	FSM	ENSG00000100372.15	ENST00000447566.5	1243	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	147.203562758817	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTGTTCTCTTTCCCTG	-40814926	True	NA	33	True	AATATA	-1	NA	40819350	40770488	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_40770982_40773936_40774020_40777039_40777136_40777227_40777374_40779008_40779126_40792524_40792677_40819194
transcript_13869.nic	chr1	-	4431	18	NIC	ENSG00000143442.22	novel	4415	18	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_16	29.2572411407766	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATTAAGAAAAAGAAAAA	-151458990	False	NA	47	True	TTTAAA	-32	NA	151459204	151404498	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_151406465_151406606_151406632_151406910_151407024_151407234_151407292_151408099_151408241_151408408_151408582_151408693_151408829_151411624_151411772_151412295_151412397_151423396_151423552_151423948_151424287_151424954_151425062_151427822_151428042_151428122_151428414_151429602_151429712_151430665_151430842_151442080_151442206_151459151
transcript_138698.known	chr22	-	3212	12	FSM	ENSG00000100380.15	ENST00000216218.8	3212	12	0	0	0	0	multi-exon	FALSE	canonical	3	1968	junction_3	105.175414278219	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTCTAAACCAGAAATGTT	-40815535	True	NA	-5	True	AATATA	-22	NA	40856639	40824534	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_40826667_40827095_40827230_40829625_40829675_40830839_40830957_40832568_40832672_40835559_40835671_40835802_40835888_40840625_40840693_40844838_40844910_40848293_40848370_40850822_40850881_40856430
transcript_138714.nic	chr22	-	877	9	ISM	ENSG00000100380.15	ENST00000216218.8	3212	12	-55	6380	-55	-40	5prime_fragment	FALSE	canonical	3	1975	junction_4	107.723894749494	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTGAAGAGCGAGAGATCAA	-40815590	True	NA	NA	False	NA	NA	NA	40856694	40830914	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_-_40830957_40832568_40832672_40835559_40835671_40835802_40835888_40840625_40840693_40844838_40844910_40848293_40848370_40850822_40850881_40856430
transcript_138719.nic	chr22	-	587	2	ISM	ENSG00000100380.15	ENST00000216218.8	3212	12	-327	26295	-327	-15437	5prime_fragment	FALSE	canonical	3	2337	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAAGGTAAGTTTTAATT	NA	False	NA	NA	False	AAGAAA	-2	NA	40856966	40850829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_-_40850881_40856430
transcript_138721.known	chr22	+	2737	11	FSM	ENSG00000196236.13	ENST00000428799.1	2737	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	20.3629565633284	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCCATCTTTTCTCTTC	40853270	True	NA	5	True	AATAAA	-18	NA	40857130	40927505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_40857246_40868998_40869116_40870047_40870140_40881769_40882178_40886312_40886516_40907586_40907650_40909121_40909236_40914238_40914325_40922332_40922514_40924361_40924483_40926268
transcript_138727.known	chr22	+	7938	10	FSM	ENSG00000196236.13	ENST00000357137.9	7938	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	10.4774890970011	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGGGTATGGTGTGTGT	40853287	True	NA	NA	False	AATAAA	-15	NA	40857147	40932815	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_40857246_40868998_40869116_40881769_40882178_40886312_40886516_40907586_40907650_40909121_40909236_40914238_40914325_40922332_40922514_40924361_40924483_40926268
transcript_138742.known	chr22	+	1418	3	FSM	ENSG00000196236.13	ENST00000482652.1	1418	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	6	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCACTGTATAATTATTG	40853236	True	NA	28	True	ATTAAA	-25	NA	40857096	40862770	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_40857246_40860677_40860794_40861617
transcript_138747.known	chr22	+	1169	5	FSM	ENSG00000100387.9	ENST00000216225.9	1169	5	0	0	0	0	multi-exon	FALSE	canonical	3	3506	junction_1	109.581875782449	561	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCCTATGAGAATCTAACG	40921402	True	NA	NA	False	NA	NA	NA	40951377	40973309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_40951477_40953554_40953634_40964046_40964118_40967798_40967885_40972475
transcript_138768.known	chr22	+	3189	17	FSM	ENSG00000100395.15	ENST00000216237.10	3189	17	0	0	0	0	multi-exon	TRUE	canonical	3	181	junction_3	21.0916897141979	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCGTTTGTTAGATCTCT	41202761	True	NA	12	True	ATTAAA	-17	NA	41205311	41231271	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41205387_41209695_41209934_41213892_41214027_41216138_41216263_41217122_41217203_41219418_41219537_41220733_41220869_41221198_41221288_41224019_41224252_41224724_41224802_41224966_41225072_41225793_41225942_41226661_41226745_41227088_41227324_41227803_41227870_41229539_41229657_41230138
transcript_138769.known	chr22	+	3282	18	FSM	ENSG00000100395.15	ENST00000452106.5	3282	18	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_14	73.9308570645409	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCGTTTGTTAGATCTCT	41202773	True	NA	12	True	ATTAAA	-17	NA	41205323	41231271	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41205387_41209695_41209934_41213892_41214027_41216138_41216263_41217122_41217203_41219418_41219537_41220733_41220869_41221198_41221288_41224019_41224252_41224724_41224802_41224966_41225072_41225793_41225942_41226661_41226745_41227088_41227324_41227574_41227680_41227803_41227870_41229539_41229657_41230138
transcript_138786.nnic	chr22	-	3283	17	NIC	ENSG00000100401.20	novel	3469	17	NA	NA	-34	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_16	287.401260218183	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACTCAGAAACTCTCACT	-41279872	True	NA	-17	True	AATAAA	-18	NA	41286221	41245610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_41246673_41249329_41249452_41249728_41249818_41251006_41251110_41252871_41252992_41254307_41254495_41256020_41256106_41256190_41256291_41256710_41256825_41257947_41258107_41261445_41261581_41264663_41264844_41268096_41268157_41274599_41274728_41280932_41281083_41284900_41285154_41285985
transcript_13879.known	chr1	-	2741	7	FSM	ENSG00000143442.22	ENST00000485040.5	2741	7	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_6	20.1390996157557	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAGGAAAGTAGGCAAAGGA	-151458965	False	214	NA	False	NA	NA	NA	151459179	151426188	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151428042_151428122_151428414_151429602_151429712_151430665_151430842_151440927_151441087_151442080_151442206_151459151
transcript_138797.nnic	chr22	-	3472	16	NIC	ENSG00000100401.20	novel	3469	17	NA	NA	-34	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_15	221.957293189478	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACTCAGAAACTCTCACT	-41279872	True	NA	-17	True	AATAAA	-18	NA	41286221	41245610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_41246673_41249329_41249452_41249728_41249818_41251006_41251110_41252871_41252992_41254307_41254495_41256020_41256106_41256190_41256291_41256710_41256825_41257947_41258107_41261445_41261581_41264663_41264844_41268096_41268157_41274599_41274728_41280932_41281083_41285543
transcript_138798.known	chr22	-	3828	16	FSM	ENSG00000100401.20	ENST00000356244.8	3828	16	0	0	0	0	multi-exon	FALSE	canonical	3	738	junction_15	65.4297248113492	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTCATGTATTAATATAT	-41279838	True	NA	-1	True	CATAAA	-17	NA	41286187	41244778	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_41246673_41249329_41249452_41249728_41249818_41251006_41251110_41252871_41252992_41254307_41254495_41256020_41256106_41256190_41256291_41256710_41256825_41257947_41258107_41261445_41261581_41264663_41264844_41268096_41268157_41274599_41274728_41280932_41281083_41285985
transcript_138799.nnic	chr22	-	2956	16	NNC	ENSG00000100401.20	novel	3469	17	NA	NA	-60	0	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_15	213.512050141334	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACTCAGAAACTCTCACT	-41279898	True	NA	-17	True	AATAAA	-18	NA	41286247	41245610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_41246673_41249329_41249452_41249728_41249818_41251006_41251110_41252871_41252992_41254307_41254495_41256020_41256106_41256190_41256291_41256710_41256825_41257947_41258107_41261445_41261581_41264663_41264844_41268096_41268157_41274599_41274728_41280932_41281083_41286085
transcript_138801.nnic	chr22	-	3415	16	NNC	ENSG00000100401.20	novel	3469	17	NA	NA	-16466	0	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_15	213.030159575795	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACTCAGAAACTCTCACT	-41302639	False	NA	-17	True	AATAAA	-18	NA	41302653	41245610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_41246673_41249329_41249452_41249728_41249818_41251006_41251110_41252871_41252992_41254307_41254495_41256020_41256106_41256190_41256291_41256710_41256825_41257947_41258107_41261445_41261581_41264663_41264844_41268096_41268157_41274599_41274728_41280932_41281083_41302032
transcript_13881.nic	chr1	-	2779	5	NIC	ENSG00000143442.22	novel	2741	7	NA	NA	17	-142	intron_retention	FALSE	canonical	3	55	junction_4	24.2332416321053	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGCTGCTGTAGTTTGTT	-151459263	False	NA	NA	False	AATAAA	-7	NA	151459477	151427718	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_151429712_151430665_151430842_151440927_151441087_151442080_151442206_151459151
transcript_13882.known	chr1	-	649	4	FSM	ENSG00000143442.22	ENST00000467287.5	649	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	43.4076286178158	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCACCCTTCATCAAGTA	-151458973	False	214	NA	False	NA	NA	NA	151459187	151429399	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151429712_151430665_151430842_151442080_151442206_151459151
transcript_138835.nnic	chr22	-	2559	12	NIC	ENSG00000100401.20	novel	3828	16	NA	NA	-81	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	262.833794071054	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACTCAGAAACTCTCACT	NA	False	NA	-17	True	AATAAA	-18	NA	41286268	41245610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_41246673_41249329_41249452_41249728_41249818_41251006_41251110_41252871_41252992_41254307_41254495_41256020_41256106_41256190_41256291_41256710_41256825_41257947_41258107_41261445_41261581_41285985
transcript_138848.known	chr22	+	5906	23	FSM	ENSG00000100403.12	ENST00000352645.5	5906	23	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	5.86786316999793	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTCCCCGAGATGTCA	41292219	True	NA	4	True	AATAAA	-15	NA	41301524	41360147	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41301773_41320654_41320714_41325563_41325598_41325720_41325919_41327205_41327365_41330022_41330104_41332170_41332228_41338312_41338356_41339000_41339192_41339815_41340138_41341087_41341147_41342528_41342629_41343414_41343577_41346002_41346209_41348066_41348168_41349119_41349302_41351560_41351647_41355468_41355603_41355756_41355863_41355953_41356063_41356342_41356477_41356644_41356809_41357176
transcript_13885.known	chr1	+	5101	21	FSM	ENSG00000143375.15	ENST00000271636.12	5101	21	0	0	0	0	multi-exon	FALSE	canonical	1	93	junction_8	62.0010282172804	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGGTTTGTCTTCTCAT	151508316	True	NA	16	True	ATTAAA	-28	NA	151511386	151538692	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151511516_151518505_151519393_151520165_151520267_151520413_151520484_151520595_151520692_151523433_151523562_151524225_151524359_151524673_151524887_151525641_151525791_151526974_151527108_151529349_151529560_151529908_151530116_151530488_151530747_151532401_151532573_151533974_151534137_151535041_151535132_151535599_151535684_151535779_151535899_151536236_151536346_151536729_151536894_151537204
transcript_138854.nic	chr22	+	2738	14	ISM	ENSG00000100403.12	ENST00000352645.5	5906	23	-42	13162	-42	10142	5prime_fragment	FALSE	canonical	3	12	junction_4	5.64323965875576	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATTTCCATCGTCACGG	41292177	True	NA	NA	False	NA	NA	NA	41301482	41346985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_41301773_41320654_41320714_41325563_41325598_41325720_41325919_41327205_41327365_41330022_41330104_41332170_41332228_41338312_41338356_41339000_41339192_41339815_41340138_41341087_41341147_41342528_41342629_41343414_41343577_41346002
transcript_138856.nnic	chr22	+	2679	14	NNC	ENSG00000100403.12	novel	5906	23	NA	NA	-42	10142	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	7.80001517218977	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATTTCCATCGTCACGG	41292177	True	NA	NA	False	NA	NA	NA	41301482	41346985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_+_41301773_41320654_41320714_41325563_41325598_41325720_41325919_41327205_41327365_41330022_41330104_41332170_41332228_41338312_41338356_41339000_41339192_41339815_41340138_41341087_41341147_41342528_41342629_41343414_41343577_41346061
transcript_138865.nic	chr22	+	1397	9	ISM	ENSG00000100403.12	ENST00000352645.5	5906	23	-42	20671	-42	2633	5prime_fragment	FALSE	canonical	3	12	junction_4	6.58478359553296	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCGGGCATGGTGGCAC	41292177	True	NA	NA	False	AATACA	-5	NA	41301482	41339476	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_41301773_41320654_41320714_41325563_41325598_41325720_41325919_41327205_41327365_41330022_41330104_41332170_41332228_41338312_41338356_41339000
transcript_138866.nic	chr22	+	1563	9	ISM	ENSG00000100403.12	ENST00000352645.5	5906	23	-42	20505	-42	2799	5prime_fragment	FALSE	canonical	3	12	junction_4	6.58478359553296	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCTGCACAATGTCTGG	41292177	True	NA	NA	False	AAAAAG	-4	NA	41301482	41339642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_41301773_41320654_41320714_41325563_41325598_41325720_41325919_41327205_41327365_41330022_41330104_41332170_41332228_41338312_41338356_41339000
transcript_138868.nic	chr22	+	2208	8	ISM	ENSG00000100403.12	ENST00000352645.5	5906	23	-42	20505	-42	2799	intron_retention	FALSE	canonical	3	12	junction_4	7.03054559963673	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCTGCACAATGTCTGG	41292177	True	NA	NA	False	AAAAAG	-4	NA	41301482	41339642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_41301773_41320654_41320714_41325563_41325598_41325720_41325919_41327205_41327365_41330022_41330104_41332170_41332228_41338312
transcript_138871.known	chr22	+	5262	7	FSM	ENSG00000100403.12	ENST00000486331.1	5262	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	7.54247233265651	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAAGTTGGGTGT	41292409	False	NA	NA	False	NA	NA	NA	41301714	41336843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41301773_41320654_41320714_41325563_41325598_41325720_41325919_41327205_41327365_41330022_41330104_41332170
transcript_138877.known	chr22	+	4381	4	FSM	ENSG00000167074.15	ENST00000266304.9	4381	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	3.77123616632825	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGGATTGTCTTTTCTG	41381367	True	NA	17	True	ATTAAA	-17	NA	41381941	41399326	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41382202_41387350_41387669_41394095_41394317_41395744
transcript_138884.known	chr22	-	777	2	FSM	ENSG00000183864.5	ENST00000434408.1	777	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTGGTGAGAAGGGAGCT	-41442358	True	NA	NA	False	NA	NA	NA	41446785	41437041	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_41437408_41446374
transcript_138885.nnic	chr22	-	4246	2	NNC	ENSG00000183864.5	novel	4337	2	NA	NA	2340	-2	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCCTTCTGCCTGCTCCTG	-41444417	False	NA	-9	True	ATTAAA	-15	NA	41444445	41433495	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_41437408_41444111
transcript_138893.known	chr22	+	3130	19	FSM	ENSG00000100412.17	ENST00000678688.1	3130	19	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	171.8031819651	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCAGCCCCAGGGCTAGT	41467123	True	NA	NA	False	NA	NA	NA	41469116	41529267	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41469183_41499725_41499863_41507790_41508050_41511875_41511969_41515376_41515536_41515766_41515918_41517296_41517470_41517596_41517632_41518480_41518573_41520170_41520277_41522829_41522988_41523204_41523279_41523829_41523942_41524845_41524969_41525192_41525349_41526261_41526454_41527287_41527421_41527900_41528023_41528478
transcript_138895.known	chr22	+	2819	19	FSM	ENSG00000100412.17	ENST00000679320.1	2819	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	176.263025961169	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGTGATTGGTGTCTGT	NA	False	NA	28	True	AAAACA	-25	NA	41469105	41528984	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41469183_41499725_41499863_41507790_41508050_41511875_41511969_41515376_41515536_41515766_41515918_41517526_41517632_41518480_41518573_41520170_41520277_41522829_41522988_41523204_41523279_41523829_41523942_41524845_41524969_41525192_41525349_41526261_41526454_41527138_41527203_41527287_41527421_41527900_41528023_41528478
transcript_138897.known	chr22	+	3237	19	FSM	ENSG00000100412.17	ENST00000677153.1	3237	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	177.134330347492	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAGGGCTAGTTGCTGG	41467134	True	NA	NA	False	NA	NA	NA	41469127	41529273	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41469183_41477912_41478128_41499725_41499863_41507790_41508050_41511875_41511969_41515376_41515536_41515766_41515918_41517526_41517632_41518480_41518573_41520170_41520277_41522829_41522988_41523204_41523279_41523829_41523942_41524845_41524969_41525192_41525349_41526261_41526454_41527287_41527421_41527900_41528023_41528478
transcript_138902.known	chr22	+	2734	18	FSM	ENSG00000100412.17	ENST00000216254.9	2734	18	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_7	45.1025743670234	1253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTGTTCTGTGAGTGAT	41467123	True	NA	18	True	AAAACA	-15	NA	41469116	41528974	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41469183_41499725_41499863_41507790_41508050_41511875_41511969_41515376_41515536_41515766_41515918_41517526_41517632_41518480_41518573_41520170_41520277_41522829_41522988_41523204_41523279_41523829_41523942_41524845_41524969_41525192_41525349_41526261_41526454_41527287_41527421_41527900_41528023_41528478
transcript_138907.known	chr22	+	3037	18	FSM	ENSG00000100412.17	ENST00000677532.1	3037	18	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	178.672188280806	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAGGGCTAGTTGCTGG	41467143	True	NA	NA	False	NA	NA	NA	41469136	41529273	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41469183_41469347_41469509_41507790_41508050_41511875_41511969_41515376_41515536_41515766_41515918_41517526_41517632_41518480_41518573_41520170_41520277_41522829_41522988_41523204_41523279_41523829_41523942_41524845_41524969_41525192_41525349_41526261_41526454_41527287_41527421_41527900_41528023_41528478
transcript_138930.known	chr22	+	1460	10	FSM	ENSG00000100412.17	ENST00000466237.2	1460	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_9	160.561591582041	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTGAAAAGAGATTTCTA	41467123	True	NA	17	True	AATAAA	-32	NA	41469116	41521590	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41469183_41499725_41499863_41507790_41508050_41511875_41511969_41515376_41515536_41515766_41515918_41517526_41517632_41518480_41518573_41520170_41520277_41521298
transcript_138932.known	chr22	+	2501	8	FSM	ENSG00000100412.17	ENST00000678454.1	2501	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	191.950461296233	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTAAAGCGTCTGGCCT	41467123	True	NA	NA	False	NA	NA	NA	41469116	41519473	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41469183_41499725_41499863_41507790_41508050_41511875_41511969_41515376_41515536_41515766_41515918_41517526_41517632_41517942
transcript_138943.known	chr22	-	4176	7	FSM	ENSG00000100413.17	ENST00000396504.6	4176	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_6	99.7542814452927	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAAGGCTTGTTTTTGGTC	-41540751	True	NA	-5	True	AATAAA	-35	NA	41544489	41525803	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_41529337_41530686_41530889_41532093_41532158_41532658_41532746_41540698_41540796_41543990_41544122_41544427
transcript_13895.known	chr1	+	3107	13	FSM	ENSG00000143367.17	ENST00000368849.8	3107	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	17.083739832562	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGGTCTGGTTTCCTT	151539114	True	NA	14	True	AATAAA	-23	NA	151540308	151583583	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151540427_151562090_151562166_151562584_151562687_151563903_151563991_151564524_151564615_151566162_151566229_151569656_151569771_151574269_151574399_151574910_151575006_151578720_151578827_151579648_151579733_151580941_151581043_151581643
transcript_138951.known	chr22	-	1464	6	FSM	ENSG00000100413.17	ENST00000431534.5	1464	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	112.819501860272	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGCTTAAGATCTGAACC	-41540717	True	NA	-31	True	AATAAA	-14	NA	41544455	41528842	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_41529337_41530686_41530889_41532093_41532158_41532603_41532746_41540698_41540796_41543990
transcript_138952.known	chr22	-	4468	6	FSM	ENSG00000100413.17	ENST00000355209.9	4468	6	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_3	28.203545876361	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGTTTTTGGTCGGTGC	-41540732	True	NA	0	True	AATAAA	-40	NA	41544470	41525798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_41529337_41530686_41530889_41532093_41532158_41532658_41532746_41540698_41540796_41543990
transcript_138957.known	chr22	-	1330	5	FSM	ENSG00000100413.17	ENST00000337566.9	1330	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	130.171761530679	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGCTTAAGATCTGAACCA	-41540724	True	NA	-30	True	AATAAA	-15	NA	41544462	41528841	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_41529337_41530686_41530889_41532093_41532158_41540698_41540796_41543990
transcript_138960.known	chr22	-	292	4	FSM	ENSG00000100410.8	ENST00000491254.1	292	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	332.808586961868	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAACGCAAAAAATACGGCT	-41468483	False	NA	NA	False	NA	NA	NA	41468499	41460431	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_41460488_41467447_41467615_41468123_41468148_41468454
transcript_138961.known	chr22	-	1053	4	FSM	ENSG00000100410.8	ENST00000216252.4	1053	4	0	0	0	0	multi-exon	FALSE	canonical	3	639	junction_3	42.055518860985	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACCTTCCCCATTTAACT	-41453041	True	NA	-22	True	AATAAA	-22	NA	41468692	41459716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_41460488_41467447_41467615_41468123_41468148_41468601
transcript_138967.known	chr22	-	1242	8	FSM	ENSG00000100417.12	ENST00000216259.8	1242	8	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_5	11.9965981572669	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTGTCAGCTGTGTCTG	-41588826	True	NA	-25	True	ATTAAA	-15	NA	41589840	41576899	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_41577441_41577807_41577924_41578805_41578882_41583958_41584059_41584280_41584373_41584526_41584604_41586075_41586194_41589718
transcript_138972.known	chr22	-	1405	7	FSM	ENSG00000100417.12	ENST00000485648.5	1405	7	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_4	12.7104506432917	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACTTTGTCACAGTATT	-41588804	True	NA	-62	True	NA	NA	NA	41589818	41576936	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_41577441_41577807_41577924_41578805_41578882_41583958_41584373_41584526_41584604_41586075_41586194_41589718
transcript_138976.known	chr22	+	2530	4	FSM	ENSG00000172346.15	ENST00000306149.12	2530	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	2.62466929133727	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGCCTGAAGCTGCCTCT	41560844	True	NA	10	True	AATAAA	-19	NA	41561009	41576666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41561184_41571842_41572142_41573654_41573778_41574732
transcript_13898.known	chr1	+	3033	12	FSM	ENSG00000143367.17	ENST00000368848.6	3033	12	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	8.19594739606156	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGGTCTGGTTTCCTT	151539113	True	NA	14	True	AATAAA	-23	NA	151540307	151583583	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151540427_151562584_151562687_151563903_151563991_151564524_151564615_151566162_151566229_151569656_151569771_151574269_151574399_151574910_151575006_151578720_151578827_151579648_151579733_151580941_151581043_151581643
transcript_138980.nnic	chr22	-	3273	7	NNC	ENSG00000100418.8	novel	3780	6	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	49.7058011369565	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTGTGTGGTGCCTGAA	-41616672	True	NA	-3	True	AATAAA	-17	NA	41621043	41598030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_41599644_41600147_41601191_41603258_41603382_41604043_41604154_41607261_41607332_41607839_41607862_41620751
transcript_138982.nnic	chr22	-	3390	7	NNC	ENSG00000100418.8	novel	3780	6	NA	NA	-64	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	49.7058011369565	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTGTGTGGTGCCTGAA	NA	False	NA	-3	True	AATAAA	-17	NA	41621107	41598030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_41599670_41600120_41601191_41603258_41603382_41604043_41604154_41607261_41607332_41607839_41607862_41620751
transcript_138987.nnic	chr22	-	3369	7	NNC	ENSG00000100418.8	novel	3780	6	NA	NA	-64	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	49.7058011369565	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTTGTGTGGTGCCTGA	NA	False	NA	-4	True	AATAAA	-16	NA	41621107	41598031	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_41599670_41600140_41601191_41603258_41603382_41604043_41604154_41607261_41607332_41607839_41607862_41620751
transcript_138990.nnic	chr22	-	3250	7	NNC	ENSG00000100418.8	novel	3780	6	NA	NA	-64	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	49.7058011369565	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCATTTGTGTGGTGCCT	NA	False	NA	-6	True	AATAAA	-14	NA	41621107	41598033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_41599588_41600175_41601191_41603258_41603382_41604043_41604154_41607261_41607332_41607839_41607862_41620751
transcript_138995.known	chr22	-	3780	6	FSM	ENSG00000100418.8	ENST00000263256.7	3780	6	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_4	19.2083315256688	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTGGTGCCTGAATCA	-41616672	True	NA	0	True	AATAAA	-20	NA	41621043	41598027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_41601191_41603258_41603382_41604043_41604154_41607261_41607332_41607839_41607862_41620751
transcript_139011.known	chr22	+	2122	13	FSM	ENSG00000196419.13	ENST00000360079.8	2122	13	0	0	0	0	multi-exon	FALSE	canonical	3	4155	junction_1	452.760575678679	2171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTTCTTTTGTGTGAAG	41559240	True	NA	16	True	AATAAA	-22	NA	41621294	41664041	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41621346_41621989_41622087_41628117_41628231_41636112_41636252_41636515_41636771_41637607_41637792_41646895_41647083_41650722_41650892_41653528_41653691_41656902_41657033_41658251_41658353_41661330_41661445_41663621
transcript_139013.known	chr22	+	2200	13	FSM	ENSG00000196419.13	ENST00000405878.5	2200	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1528.91292853961	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGTTCTTTTGTGTGA	41559406	False	NA	14	True	AATAAA	-20	NA	41621460	41664039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41621592_41621989_41622087_41628117_41628231_41636112_41636252_41636515_41636771_41637607_41637792_41646895_41647083_41650722_41650892_41653528_41653691_41656902_41657033_41658251_41658353_41661330_41661445_41663621
transcript_139018.known	chr22	+	2148	12	FSM	ENSG00000196419.13	ENST00000428575.6	2148	12	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	1539.96224596847	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTGTGTGAAGGAGAAAG	41621106	False	NA	23	True	AATAAA	-29	NA	41621162	41664048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41621346_41621989_41622087_41636112_41636252_41636515_41636771_41637607_41637792_41646895_41647083_41650722_41650892_41653528_41653691_41656902_41657033_41658251_41658353_41661330_41661445_41663621
transcript_13902.known	chr1	+	2498	12	FSM	ENSG00000143376.14	ENST00000368841.7	2498	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	20.9990161123313	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGAAAAAGTTAAAGTC	151606626	True	NA	NA	False	NA	NA	NA	151612063	151694505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151612382_151638887_151639120_151658234_151658428_151660797_151660863_151662165_151662271_151665932_151666012_151668471_151668636_151683355_151683446_151692434_151692585_151692910_151693040_151693423_151693484_151693592
transcript_139030.known	chr22	+	2709	12	FSM	ENSG00000196419.13	ENST00000359308.8	2709	12	0	0	0	0	multi-exon	FALSE	canonical	3	4868	junction_3	294.393367020139	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGTTCTTTTGTGTGA	41559295	True	NA	14	True	AATAAA	-20	NA	41621349	41664039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41622087_41628117_41628231_41636112_41636252_41636515_41636771_41637607_41637792_41646895_41647083_41650722_41650892_41653528_41653691_41656902_41657033_41658251_41658353_41661330_41661445_41663621
transcript_139031.known	chr22	+	1958	11	FSM	ENSG00000196419.13	ENST00000405506.2	1958	11	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	1601.94381923961	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTATATACTGTTCTTTTG	41621795	False	NA	9	True	AATAAA	-15	NA	41621982	41664034	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41622087_41636112_41636252_41636515_41636771_41637607_41637792_41646895_41647083_41650722_41650892_41653528_41653691_41656902_41657033_41658251_41658353_41661330_41661445_41663621
transcript_139033.known	chr22	-	1036	4	FSM	ENSG00000100138.15	ENST00000648674.1	1036	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	1146.43573255935	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGGTTCCAGCTTTCAG	-41665757	True	NA	-113	True	NA	NA	NA	41688895	41674614	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_41675196_41680243_41680365_41682355_41682588_41688793
transcript_13904.known	chr1	+	7250	12	FSM	ENSG00000143376.14	ENST00000368843.8	7250	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_11	15.9451539310318	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTAGACTACAAATCCTTT	151606591	True	NA	39	True	AATAAA	-31	NA	151612028	151699091	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151612513_151638887_151639120_151658234_151658428_151660797_151660863_151662165_151662271_151665932_151666012_151668471_151668636_151683355_151683446_151692434_151692585_151692910_151693040_151693423_151693484_151693592
transcript_139041.known	chr22	-	1458	3	FSM	ENSG00000100138.15	ENST00000401959.6	1458	3	0	0	0	0	multi-exon	FALSE	canonical	3	2157	junction_2	302	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGCAGTGCCTGATTCT	-41665729	True	NA	-7	True	AATAAA	-21	NA	41688867	41673932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_41675196_41680243_41680365_41688793
transcript_139045.known	chr22	+	4890	2	FSM	ENSG00000184208.12	ENST00000654032.1	4890	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGTGTTCTGATTTCT	41690063	False	NA	3	True	AATAAA	-15	NA	41690627	41698136	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41690844_41693462
transcript_139046.known	chr22	-	640	2	FSM	ENSG00000100138.15	ENST00000469522.1	640	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGATGCTTGGTACAGA	-41665709	True	NA	-22	True	AATAAA	-17	NA	41688847	41687741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_41688328_41688793
transcript_139048.known	chr22	+	5699	22	FSM	ENSG00000198911.12	ENST00000424354.5	5699	22	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_16	362.914731088194	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGAGGTGTGTGAGGGTCT	41813345	True	NA	19	True	AATAAA	-21	NA	41833163	41907306	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41833359_41866830_41867281_41868610_41868793_41870888_41871036_41873797_41874020_41875336_41875452_41875542_41875725_41877228_41877422_41877941_41878124_41878658_41878759_41880715_41880993_41884841_41885012_41893116_41893286_41894819_41894938_41897051_41897162_41898648_41898782_41899236_41899554_41900019_41900123_41900329_41900499_41902969_41903156_41904862_41904975_41905439
transcript_13905.known	chr1	+	6441	12	FSM	ENSG00000143376.14	ENST00000458013.7	6441	12	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	10.5140598507643	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTGGTTTCCTAGACT	151606612	True	NA	28	True	AATAAA	-20	NA	151612049	151699080	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151612513_151638887_151639120_151658234_151658428_151660797_151660863_151662165_151662271_151665932_151666012_151668471_151668636_151683355_151683446_151692434_151692585_151692910_151693040_151693423_151693484_151694369
transcript_139057.known	chr22	+	5365	20	FSM	ENSG00000198911.12	ENST00000612482.4	5365	20	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_10	259.873163181249	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGGTGTGTGAGGGTCTG	NA	False	NA	20	True	AATAAA	-22	NA	41833078	41907307	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41833359_41866830_41867281_41868610_41868793_41870888_41871036_41873797_41874020_41875336_41875452_41875542_41875725_41877228_41877422_41877941_41878124_41878658_41878759_41880715_41880993_41884841_41885012_41893116_41893286_41894819_41894938_41897051_41897162_41898648_41898782_41900329_41900499_41902969_41903156_41904862_41904975_41905439
transcript_139066.known	chr22	+	5237	19	FSM	ENSG00000198911.12	ENST00000361204.9	5237	19	0	0	0	0	multi-exon	FALSE	canonical	3	719	junction_9	64.7199093530474	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGAGGTGTGTGAGGGTC	41813286	True	NA	18	True	AATAAA	-20	NA	41833104	41907305	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41833359_41866830_41867281_41868610_41868793_41870888_41871036_41873797_41874020_41875336_41875452_41875542_41875725_41877228_41877422_41877941_41878124_41880715_41880993_41884841_41885012_41893116_41893286_41894819_41894938_41897051_41897162_41898648_41898782_41900329_41900499_41902969_41903156_41904862_41904975_41905439
transcript_13909.nnic	chr1	+	2405	11	NNC	ENSG00000143376.14	novel	2498	12	NA	NA	-21	0	at_least_one_novel_splicesite	TRUE	canonical	3	5	junction_1	21.3953265925061	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGAAAAAGTTAAAGTC	NA	False	NA	NA	False	NA	NA	NA	151611984	151694505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_151612442_151658234_151658428_151660797_151660863_151662165_151662271_151665932_151666012_151668471_151668636_151683355_151683446_151692434_151692585_151692910_151693040_151693423_151693484_151693592
transcript_139104.known	chr22	+	7135	7	FSM	ENSG00000100147.14	ENST00000255784.6	7135	7	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_5	9.42956343987709	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAATGATCCCATGGTA	41797623	True	NA	11	True	AATAAA	-20	NA	41800678	41832164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41800767_41808874_41808994_41809878_41810001_41810206_41810292_41813263_41813446_41813750_41813823_41825697
transcript_139119.known	chr22	-	938	6	FSM	ENSG00000100162.15	ENST00000215980.10	938	6	0	0	0	0	multi-exon	FALSE	canonical	3	571	junction_2	18.0510387512741	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTCTCATTCACCACTTT	-41940829	True	NA	-19	True	AAAAAG	-12	NA	41947152	41938736	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_41939197_41943609_41943702_41945224_41945305_41945912_41946006_41946416_41946497_41947019
transcript_139123.known	chr22	-	818	5	FSM	ENSG00000100162.15	ENST00000407253.7	818	5	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	245.549765831694	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAAAAATCACTGGTCTC	-41940813	True	NA	-31	True	NA	NA	NA	41947136	41938748	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_41939197_41945224_41945305_41945912_41946006_41946416_41946497_41947019
transcript_139125.known	chr22	-	689	4	FSM	ENSG00000100162.15	ENST00000396437.3	689	4	0	0	0	0	multi-exon	FALSE	canonical	3	609	junction_2	4.54606056566195	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACACATATACACATACTT	-41940828	True	NA	NA	False	AATAAA	-22	NA	41947151	41944920	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_41945305_41945912_41946006_41946416_41946497_41947019
transcript_139126.known	chr22	-	1002	5	FSM	ENSG00000100162.15	ENST00000402338.5	1002	5	0	0	0	0	multi-exon	FALSE	canonical	3	571	junction_2	19.4550764583437	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTCTCATTCACCACTTT	-41940370	False	NA	-19	True	AAAAAG	-12	NA	41946693	41938736	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_41939197_41943609_41943702_41945224_41945305_41945912_41946006_41946416
transcript_139127.known	chr22	-	905	4	FSM	ENSG00000100162.15	ENST00000404067.5	905	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	267.08841648829	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTCTCATTCACCACTTT	-41940365	False	NA	-19	True	AAAAAG	-12	NA	41946688	41938736	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_41939197_41945224_41945305_41945912_41946006_41946416
transcript_139128.known	chr22	+	2586	11	FSM	ENSG00000100167.21	ENST00000396426.7	2586	11	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_10	34.8311642067847	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGGCCTGTCTTATTT	41976159	True	NA	21	True	ACTAAA	-21	NA	41976809	41998221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41977075_41981644_41981837_41985983_41986113_41987205_41987288_41987621_41987760_41989566_41989685_41991572_41991669_41992663_41992764_41994289_41994342_41994620_41994715_41996901
transcript_139129.known	chr22	+	4649	10	FSM	ENSG00000100167.21	ENST00000396425.7	4649	10	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_3	13.3869293171814	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGGCCTGTCTTATTT	41976283	False	NA	21	True	ACTAAA	-21	NA	41976933	41998221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_41977075_41981644_41981837_41985983_41986113_41987205_41987288_41987621_41987760_41989566_41989685_41991572_41991669_41992663_41992764_41994289_41994342_41994620
transcript_13913.known	chr1	+	1437	11	FSM	ENSG00000143376.14	ENST00000642376.1	1437	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	21.191743675309	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGAGCCAGGACATTCT	NA	False	NA	NA	False	NA	NA	NA	151612005	151693618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151612382_151658234_151658428_151660797_151660863_151662165_151662271_151665932_151666012_151668471_151668636_151683355_151683446_151692434_151692585_151692910_151693040_151693423_151693484_151693592
transcript_139131.known	chr22	-	1869	10	FSM	ENSG00000198951.12	ENST00000402937.1	1869	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	60.1128568241067	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCTCAGGTCACCAATA	-42070832	False	NA	-40	True	NA	NA	NA	42070842	42059801	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_42060414_42060923_42061068_42062826_42063025_42065737_42065900_42066709_42066805_42067112_42067291_42067764_42067937_42068438_42068575_42070281_42070374_42070762
transcript_139133.known	chr22	-	3696	9	FSM	ENSG00000198951.12	ENST00000396398.8	3696	9	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_2	11.9732775379175	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTTCCTGCACATGCT	-42069774	True	NA	22	True	NA	NA	NA	42070812	42058333	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_42060414_42060923_42061068_42062826_42063025_42065737_42065900_42066709_42066805_42067112_42067291_42067764_42067937_42068438_42068575_42070281
transcript_139137.nnic	chr22	-	3535	8	NIC	ENSG00000198951.12	novel	3696	9	NA	NA	7	0	intron_retention	FALSE	canonical	3	9	junction_6	68.3747178481661	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTTCCTGCACATGCT	-42070813	False	NA	22	True	NA	NA	NA	42070823	42058333	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_42060414_42060923_42061068_42062826_42063025_42065737_42065900_42066709_42066805_42067112_42067291_42068438_42068575_42070281
transcript_139138.nnic	chr22	-	3468	8	NIC	ENSG00000198951.12	novel	3696	9	NA	NA	7	-67	intron_retention	FALSE	canonical	3	9	junction_6	68.3747178481661	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAGAGTGAACCTCCATG	-42070813	False	NA	-45	True	AATAAA	-2	NA	42070823	42058400	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_42060414_42060923_42061068_42062826_42063025_42065737_42065900_42066709_42066805_42067112_42067291_42068438_42068575_42070281
transcript_139140.nnic	chr22	-	2073	8	NIC	ENSG00000198951.12	novel	1856	10	NA	NA	7	0	intron_retention	FALSE	canonical	3	9	junction_6	68.3747178481661	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGTCACCAATAAACCTG	-42070813	False	NA	-34	True	NA	NA	NA	42070823	42059795	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_42060414_42060923_42061068_42062826_42063025_42065737_42065900_42066709_42066805_42067112_42067291_42068438_42068575_42070281
transcript_139143.known	chr22	+	540	1	FSM	ENSG00000286659.1	ENST00000662963.1	540	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATAATAGATTGATTTACT	42070883	True	NA	NA	False	AATAAA	-22	NA	42070948	42071488	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_42070900_42071500
transcript_139145.known	chr22	+	2335	3	FSM	ENSG00000177096.9	ENST00000321753.8	2335	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	7	338	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTCCGCTCCCTGGGTT	42073794	True	NA	8	True	AGTAAA	-16	NA	42074247	42079438	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_42074342_42075570_42075653_42077279
transcript_139146.known	chr22	+	1562	3	FSM	ENSG00000183172.9	ENST00000331479.4	1562	3	0	0	0	0	multi-exon	FALSE	canonical	3	675	junction_2	10	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAGTGTTCCTCTGAGTT	42079246	False	NA	NA	False	AATAAA	-13	NA	42079699	42084284	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_42079955_42081924_42082066_42083118
transcript_139147.known	chr22	+	591	3	FSM	ENSG00000183172.9	ENST00000422252.1	591	3	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_1	318	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTGCGTGACTGAGTGAT	42079237	False	NA	6	True	AATAAA	-15	NA	42079690	42083353	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_42079906_42081924_42082066_42083118
transcript_139150.known	chr22	-	1183	3	FSM	ENSG00000184983.11	ENST00000617763.1	1183	3	0	0	0	0	multi-exon	FALSE	canonical	3	4072	junction_1	288.5	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGTTTGGATGGTGGT	NA	False	NA	-1	True	AATAAA	-24	NA	42090884	42085526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_42086315_42087059_42087176_42090605
transcript_139156.known	chr22	+	1521	4	FSM	ENSG00000237037.9	ENST00000417327.5	1521	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	2.62466929133727	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGTCTGTGGTTCTCTGT	NA	False	NA	NA	False	NA	NA	NA	42090955	42125349	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_42091182_42091296_42091601_42124046_42124563_42124874
transcript_139158.known	chr22	-	1058	5	FSM	ENSG00000100207.21	ENST00000404876.1	1058	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	44.6451285136464	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGTGGGGGGAATTAAAAG	NA	False	NA	NA	False	NA	NA	NA	42210208	42161097	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_42161359_42168608_42168704_42169846_42169897_42179608_42179703_42209650
transcript_139160.known	chr22	-	6237	4	FSM	ENSG00000100207.21	ENST00000335626.8	6237	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	25.9529488797623	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTATTTTTAGTCTGGA	NA	False	NA	NA	False	ATTAAA	-25	NA	42215440	42161055	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_42161359_42169846_42169897_42179608_42179703_42209650
transcript_139165.known	chr22	+	4829	2	FSM	ENSG00000182057.5	ENST00000609564.2	4829	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGGACAGAGGGCAATGT	42269513	True	NA	NA	False	AATAAA	-14	NA	42269702	42279493	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_42270026_42274987
transcript_139166.known	chr22	-	780	2	FSM	ENSG00000229891.3	ENST00000432473.2	896	2	116	0	40	0	multi-exon	FALSE	canonical	3	119	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGTGTTCCATTTCTGT	-42368510	True	NA	-12	True	AATAAA	-18	NA	42369168	42364399	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_42364726_42368714
transcript_139167.known	chr22	-	475	2	FSM	ENSG00000229891.3	ENST00000412060.1	475	2	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGAGTGTTCCATTTCT	-42368550	True	NA	-14	True	AATAAA	-16	NA	42369208	42364401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_42364726_42369057
transcript_139168.known	chr22	-	1142	2	FSM	ENSG00000229891.3	ENST00000424852.1	1142	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGCCCTGTATTAAATG	-42368578	True	NA	NA	False	AATAAA	-27	NA	42369236	42364524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_42365145_42368714
transcript_139174.known	chr22	+	1712	10	FSM	ENSG00000172250.17	ENST00000455578.5	1712	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	3.74495545474505	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTTTTGAGGCTTTTTC	42500424	True	NA	NA	False	AATAAA	-17	NA	42500578	42512559	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_42500693_42501624_42501775_42501918_42502033_42502350_42502769_42503198_42503274_42505032_42505143_42509027_42509111_42510630_42510725_42511815_42511928_42512117
transcript_139178.nic	chr22	-	2985	8	NIC	ENSG00000189306.11	novel	5419	7	NA	NA	-38	-2588	intron_retention	FALSE	canonical	3	89	junction_7	782.379651043754	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTCTGTTTCTTAAATTC	-42506331	True	NA	-14	True	NA	NA	NA	42519834	42510931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_42512996_42514105_42514305_42514681_42514780_42515150_42515269_42516010_42516137_42518004_42518148_42518612_42518729_42519713
transcript_13918.known	chr1	+	1347	10	FSM	ENSG00000143376.14	ENST00000642479.1	1347	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	19.1601438175999	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAGAAAAGAGGTAATTCT	151606751	True	NA	NA	False	NA	NA	NA	151612188	151693471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151612513_151658234_151658428_151660797_151660863_151662165_151662271_151665932_151666012_151668471_151668636_151683355_151683446_151692434_151692585_151692910_151693040_151693423
transcript_139180.nic	chr22	-	2737	8	NIC	ENSG00000189306.11	novel	5419	7	NA	NA	-38	-2836	intron_retention	FALSE	canonical	3	89	junction_7	782.379651043754	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGACTATTAGCTGGGCA	-42506331	True	NA	NA	False	NA	NA	NA	42519834	42511179	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_42512996_42514105_42514305_42514681_42514780_42515150_42515269_42516010_42516137_42518004_42518148_42518612_42518729_42519713
transcript_139189.known	chr22	-	5419	7	FSM	ENSG00000189306.11	ENST00000323013.7	5419	7	0	0	0	0	multi-exon	FALSE	canonical	3	797	junction_4	411.459495778949	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATAGAACCTTTTTTTTT	-42506293	True	NA	-7	True	AATAAA	-14	NA	42519796	42508343	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_42512996_42514105_42514305_42514681_42514780_42515150_42515269_42516010_42516137_42518004_42518148_42519713
transcript_139233.known	chr22	+	1337	12	FSM	ENSG00000183569.18	ENST00000327678.10	1337	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	6.43852043986392	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTTGAGGCTTTTTTG	42553801	True	NA	NA	False	AATAAA	-18	NA	42553955	42574382	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_42554043_42554937_42555088_42555231_42555346_42555663_42555706_42556063_42556084_42556513_42556589_42558347_42558458_42560185_42560266_42566303_42566339_42571120_42571204_42572435_42572530_42573935
transcript_139237.known	chr22	-	2375	8	FSM	ENSG00000182841.13	ENST00000357802.7	2387	8	1	11	0	-11	multi-exon	FALSE	canonical	3	109	junction_1	334.148262339474	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAAGCGGGTTGGAGGGT	-42578430	True	NA	NA	False	AATAAA	-13	NA	42582038	42555222	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_42556675_42574679_42574819_42575930_42576127_42576511_42576610_42576980_42577099_42577843_42577963_42580216_42580360_42581928
transcript_139238.known	chr22	-	1778	8	FSM	ENSG00000182841.13	ENST00000437211.5	1778	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	349.919757565494	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACATCACCTGAGGTCAG	-42578401	True	NA	NA	False	AAGAAA	-11	NA	42582009	42569128	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_42570013_42574679_42574819_42575930_42576127_42576511_42576610_42576980_42577099_42577843_42577963_42580216_42580360_42581928
transcript_139262.known	chr22	-	3337	9	FSM	ENSG00000100227.19	ENST00000445215.5	3337	9	0	0	0	0	multi-exon	FALSE	canonical	1	20	junction_4	196.036946453978	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGAGTTATCTTTTTTT	-42603004	True	NA	-6	True	AATAAA	-16	NA	42614869	42583720	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_42585969_42587505_42587573_42591954_42592085_42595536_42595604_42596185_42596366_42599697_42599794_42601969_42602057_42602769_42603161_42614798
transcript_139263.known	chr22	-	3491	9	FSM	ENSG00000100227.19	ENST00000451060.6	3491	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	205.199293371103	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGAGTTATCTTTTTT	-42603097	True	NA	-7	True	AATAAA	-15	NA	42614962	42583721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_42585969_42587505_42587573_42591954_42592085_42595536_42595615_42596185_42596366_42599697_42599794_42601969_42602108_42602769_42603161_42614798
transcript_139272.known	chr22	-	3323	8	FSM	ENSG00000100227.19	ENST00000348657.6	3323	8	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_6	166.483559278999	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGAGTTATCTTTTTTT	-42603066	True	NA	-6	True	AATAAA	-16	NA	42614931	42583720	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_42585969_42587505_42587573_42591954_42592085_42595536_42595615_42596185_42596366_42599697_42599794_42602769_42603161_42614798
transcript_139283.known	chr22	-	2916	9	FSM	ENSG00000100243.22	ENST00000352397.10	2916	9	0	0	0	0	multi-exon	FALSE	canonical	3	1554	junction_8	91.8925153372134	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGAAGAAGATAGGTGGCTG	-42639713	True	NA	-2	True	AATAAA	-15	NA	42649392	42617839	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_42619946_42623788_42623889_42627303_42627390_42627604_42627689_42628151_42628282_42630881_42630989_42631377_42631451_42636714_42636847_42649294
transcript_139286.known	chr22	-	2092	3	FSM	ENSG00000128274.17	ENST00000642412.2	2092	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	6.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGGGCCTTGTGATTGGT	-42719685	True	NA	-14	True	AATAAA	-16	NA	42720870	42692120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_42693998_42695490_42695632_42720796
transcript_139287.known	chr22	-	1956	3	FSM	ENSG00000128274.17	ENST00000381278.4	1956	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	16.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCGGGCCTTGTGATTGG	-42719634	True	NA	-15	True	AATAAA	-15	NA	42720819	42692121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_42693998_42695574_42695632_42720796
transcript_139288.nic	chr22	-	3619	2	NIC	ENSG00000128274.17	novel	1956	3	NA	NA	-35	0	intron_retention	FALSE	canonical	3	41	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCGGGCCTTGTGATTGG	-42719720	True	NA	-15	True	AATAAA	-15	NA	42720905	42692121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_42695632_42720796
transcript_139289.known	chr22	-	407	2	FSM	ENSG00000128274.17	ENST00000647439.1	407	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGTATTTGCATATCT	-42719677	True	NA	NA	False	AATAAA	-25	NA	42720862	42718245	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_42718587_42720796
transcript_139290.known	chr22	-	2019	2	FSM	ENSG00000128274.17	ENST00000249005.3	2019	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCGGGCCTTGTGATTGG	NA	False	NA	-15	True	AATAAA	-15	NA	42695633	42692121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_42693998_42695490
transcript_139295.known	chr22	-	3251	11	FSM	ENSG00000100266.19	ENST00000263246.8	3251	11	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_5	34.5637092916834	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAAGTCCCTTCGCCAT	-43007308	True	NA	-18	True	AATAAA	-17	NA	43015149	42869772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_42871470_42876136_42876334_42876887_42877011_42879047_42879170_42882183_42882305_42884385_42884562_42888642_42888799_42890946_42891183_42893456_42893614_42912020_42912158_43015020
transcript_139298.nnic	chr22	-	3144	10	NIC	ENSG00000100266.19	novel	3251	11	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	3	61	junction_9	128.801982194701	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAAGTCCCTTCGCCAT	-43007338	True	NA	-18	True	AATAAA	-17	NA	43015179	42869772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_42871470_42876136_42876334_42876887_42877011_42879047_42879170_42882183_42882305_42884385_42884562_42888642_42888799_42890946_42891183_42893456_42893614_43015020
transcript_1393.nic	chr1	+	2155	6	ISM	ENSG00000067606.17	ENST00000378567.8	2385	18	42	39629	-32	-320	5prime_fragment	FALSE	canonical	3	138	junction_4	6.94550214167413	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCAGGCATGGTGGTGC	2047443	True	NA	NA	False	AATACA	-5	NA	2050452	2145766	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_2050702_2055440_2055563_2056483_2056574_2059540_2059592_2135261_2135348_2144209
transcript_13930.known	chr1	-	2318	14	FSM	ENSG00000182134.17	ENST00000368827.10	2318	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	83.3070175411269	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGTCTTTCTGAACTAG	-151786814	True	NA	NA	False	GATAAA	-15	NA	151790522	151771563	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151771987_151774412_151774505_151774709_151774807_151775064_151775167_151775391_151775544_151775819_151775885_151776095_151776269_151776438_151776600_151778684_151779007_151779102_151779243_151779950_151780141_151781480_151781588_151782898_151783050_151790379
transcript_139309.known	chr22	-	2728	16	FSM	ENSG00000242247.11	ENST00000263245.10	2728	16	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_5	17.899224067602	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTCGTAATAAGTCATCG	-42855786	True	NA	3	True	AATAAA	-41	NA	42857273	42796501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_42797606_42799038_42799161_42807072_42807164_42808766_42808891_42810812_42810945_42817141_42817265_42817728_42817858_42822269_42822410_42823655_42823703_42826939_42827000_42831548_42831637_42834241_42834326_42835361_42835494_42840943_42841017_42847513_42847633_42857113
transcript_139311.nic	chr22	-	2633	15	NIC	ENSG00000242247.11	novel	2728	16	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_4	28.9352725924606	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTCGTAATAAGTCATCG	-42855823	True	NA	3	True	AATAAA	-41	NA	42857310	42796501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_42797606_42799038_42799161_42807072_42807164_42808766_42808891_42817141_42817265_42817728_42817858_42822269_42822410_42823655_42823703_42826939_42827000_42831548_42831637_42834241_42834326_42835361_42835494_42840943_42841017_42847513_42847633_42857113
transcript_139313.nic	chr22	-	800	8	ISM	ENSG00000242247.11	ENST00000263245.10	2728	16	-37	27154	-16	0	5prime_fragment	FALSE	canonical	3	120	junction_3	9.95705062470093	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTATTATGTACTTTAT	-42855823	True	NA	NA	False	CATAAA	-29	NA	42857310	42823655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_-_42823703_42826939_42827000_42831548_42831637_42834241_42834326_42835361_42835494_42840943_42841017_42847513_42847633_42857113
transcript_139314.known	chr22	-	1736	11	FSM	ENSG00000100271.17	ENST00000266254.12	1736	11	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_7	8.49470423263812	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACAGCTTCAAGCATGTA	-43087966	True	NA	NA	False	ATTAAA	-22	NA	43089391	43039515	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_43039906_43046409_43046574_43051800_43051888_43059383_43059528_43063812_43063922_43064189_43064325_43068409_43068591_43069635_43069845_43075473_43075591_43079901_43079987_43089276
transcript_139318.known	chr22	+	951	5	FSM	ENSG00000100290.3	ENST00000216115.3	951	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	8.0156097709407	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGGTCCTCTCTGGGG	43110279	True	NA	20	True	AATAAA	-17	NA	43110749	43129712	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_43110804_43124015_43124184_43127696_43127796_43128495_43128626_43129212
transcript_139322.known	chr22	-	2057	4	FSM	ENSG00000100294.13	ENST00000290429.11	2057	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	24.5130350811336	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTGGGTGGTTGTTCA	-43141046	True	NA	NA	False	NA	NA	NA	43143398	43132208	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_43133487_43137080_43137299_43141161_43141250_43142925
transcript_139326.known	chr22	-	1134	3	FSM	ENSG00000100294.13	ENST00000327555.5	1134	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	50	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTACATGACCCAGTC	-43141012	True	NA	-12	True	CATAAA	-19	NA	43143364	43132879	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_43133487_43141161_43141250_43142925
transcript_139332.known	chr22	-	549	2	FSM	ENSG00000100294.13	ENST00000464244.1	549	2	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACATGGACAGGGGTGACA	-43140928	False	NA	NA	False	NA	NA	NA	43143280	43141055	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_43141250_43142925
transcript_139335.known	chr22	+	836	4	FSM	ENSG00000100300.18	ENST00000337554.8	836	4	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	47.9884245301811	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGGCCTTTTTGCTTGGG	43149073	True	NA	18	True	AATAAA	-18	NA	43151558	43163242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_43151605_43159209_43159421_43161051_43161191_43162802
transcript_139336.known	chr22	+	636	3	FSM	ENSG00000100300.18	ENST00000583777.5	636	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	150.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGGCCTTTTTGCTTGG	43149061	True	NA	17	True	AATAAA	-17	NA	43151546	43163241	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_43151605_43161051_43161191_43162802
transcript_13934.nic	chr1	-	2643	14	NIC	ENSG00000182134.17	novel	3093	14	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	69.2482029331264	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTAAAACCAAATTCTG	-151786828	True	NA	-13	True	AATAAA	-14	NA	151790536	151773493	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_151774228_151774412_151774505_151774709_151774807_151775064_151775167_151775391_151775544_151775819_151775885_151776095_151776269_151776438_151776600_151778684_151779007_151779102_151779243_151779950_151780141_151781480_151781588_151782898_151783050_151790379
transcript_13935.nic	chr1	-	2618	14	NIC	ENSG00000182134.17	novel	3093	14	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	81.87969237649	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTAAAACCAAATTCTG	-151786828	True	NA	-13	True	AATAAA	-14	NA	151790536	151773493	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_151774228_151774412_151774505_151774709_151774807_151775064_151775167_151775391_151775544_151775819_151775885_151776095_151776269_151776438_151776600_151778684_151779007_151779102_151779243_151779950_151780141_151781480_151781588_151782898_151783050_151790404
transcript_139363.known	chr22	-	3386	14	FSM	ENSG00000100304.13	ENST00000216129.7	3386	14	0	0	0	0	multi-exon	FALSE	canonical	3	1602	junction_3	104.078031718468	3491	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGCCCTCCTTTCTCTT	-43172140	True	NA	-5	True	AATAAA	-16	NA	43187134	43166621	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_43168160_43168773_43168913_43169499_43169569_43171818_43171901_43172402_43172555_43173714_43173827_43174208_43174404_43174498_43174616_43176319_43176397_43179618_43179753_43179840_43180001_43180741_43180941_43182979_43183150_43186892
transcript_13937.known	chr1	-	1807	14	FSM	ENSG00000182134.17	ENST00000526413.5	1807	14	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_10	101.498127187083	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTGGACTACCACG	-151786722	True	NA	NA	False	NA	NA	NA	151790430	151774098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151774228_151774412_151774505_151774709_151774807_151775064_151775167_151775391_151775544_151775819_151775885_151776095_151776269_151776438_151776600_151778684_151779007_151779102_151779243_151780050_151780141_151781480_151781588_151782898_151783050_151790404
transcript_13942.known	chr1	-	2792	13	FSM	ENSG00000182134.17	ENST00000368824.8	2792	13	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_12	39.622086293155	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTAAAACCAAATTCTG	-151786792	True	NA	-13	True	AATAAA	-14	NA	151790500	151773493	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151774505_151774709_151774807_151775064_151775167_151775391_151775544_151775819_151775885_151776095_151776269_151776438_151776600_151778684_151779007_151779102_151779243_151779950_151780141_151781480_151781588_151782898_151783050_151790379
transcript_13943.known	chr1	-	2768	13	FSM	ENSG00000182134.17	ENST00000458431.6	2768	13	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_12	62.4946108787701	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTTTCTAAAACCAAAT	-151786797	True	NA	-17	True	AATAAA	-10	NA	151790505	151773497	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151774505_151774709_151774807_151775064_151775167_151775391_151775544_151775819_151775885_151776095_151776269_151776438_151776600_151778684_151779007_151779102_151779243_151779950_151780141_151781480_151781588_151782898_151783050_151790404
transcript_139434.known	chr22	+	1951	2	FSM	ENSG00000203527.2	ENST00000458463.1	1951	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATTGTTTTGACTCTAG	43275942	True	NA	NA	False	AATAAA	-14	NA	43275954	43283830	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_43276012_43281936
transcript_139437.known	chr22	-	2561	8	FSM	ENSG00000130540.14	ENST00000422525.1	2561	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_7	13.5194493306525	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCGTCGAGCGTTTCTG	-43861796	True	NA	-9	True	AATAAA	-14	NA	43862470	43824509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_43826114_43827513_43827641_43829059_43829199_43833639_43833735_43838866_43838994_43839944_43840026_43841801_43841933_43862213
transcript_13944.nic	chr1	-	2728	13	ISM	ENSG00000182134.17	ENST00000525790.5	2217	14	-48	3387	-14	0	5prime_fragment	FALSE	canonical	3	25	junction_9	81.294176024827	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTAAAACCAAATTCTG	-151786828	True	NA	-13	True	AATAAA	-14	NA	151790536	151773493	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_151774505_151774709_151774807_151775064_151775167_151775391_151775544_151775819_151775885_151776095_151776269_151776438_151776600_151778684_151779007_151779102_151779243_151780050_151780141_151781480_151781588_151782898_151783050_151790379
transcript_139440.known	chr22	-	2539	9	FSM	ENSG00000100341.13	ENST00000216177.9	2540	9	0	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_5	11.1404387256517	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATTCTTTCATTCATTT	-43891629	True	NA	NA	False	AATAAA	-22	NA	43892013	43879678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_43880886_43881557_43881675_43884212_43884346_43886302_43886489_43887590_43887652_43889328_43889539_43889798_43889865_43891061_43891295_43891687
transcript_139446.nnic	chr22	-	2285	8	NIC	ENSG00000100341.13	novel	2540	9	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	12.4670995595837	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTCTTTCATTCATTTA	-43891650	True	NA	NA	False	AATAAA	-23	NA	43892034	43879677	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_43880886_43881557_43881675_43884212_43884346_43886302_43886489_43887590_43887652_43889328_43889496_43889798_43889865_43891687
transcript_139449.known	chr22	-	2197	7	FSM	ENSG00000100341.13	ENST00000381198.7	2000	7	0	-197	0	-1	multi-exon	FALSE	canonical	0	0	junction_5	11.8556128291858	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATTCTTTCATTCATTT	-43891629	True	NA	NA	False	AATAAA	-22	NA	43892013	43879678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_43880886_43881557_43881675_43884212_43884346_43886302_43886489_43887590_43887652_43889328_43889496_43891687
transcript_139455.nic	chr22	-	3225	2	ISM	ENSG00000100341.13	ENST00000438734.1	921	5	-49	4214	-31	-4214	5prime_fragment	FALSE	canonical	3	10	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGGAAAGAAAGAAACACA	-43891660	True	NA	NA	False	NA	NA	NA	43892044	43888426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_-_43891295_43891687
transcript_139456.known	chr22	+	5394	13	FSM	ENSG00000188677.15	ENST00000338758.12	5394	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	7.41994309651736	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCTGTCCACCGTCTTT	44023916	True	NA	3	True	AATAAA	-14	NA	44024301	44172939	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_44024452_44093927_44094018_44100052_44100124_44119037_44119141_44131486_44131628_44132893_44133010_44136459_44136519_44140123_44140144_44147860_44147923_44151482_44151552_44157981_44158084_44163857_44163931_44168601
transcript_13947.known	chr1	-	1224	7	FSM	ENSG00000143436.11	ENST00000368830.8	1224	7	0	0	0	0	multi-exon	FALSE	canonical	3	503	junction_3	57.7429649394625	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTTGCTTACTGGTC	-151750968	True	NA	-5	True	AATAAA	-20	NA	151763496	151759646	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151760182_151760815_151760900_151761450_151761553_151762104_151762156_151762375_151762501_151762989_151763147_151763326
transcript_139470.known	chr22	+	2753	9	FSM	ENSG00000100344.11	ENST00000216180.8	2753	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	9.78519289539046	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGAAAAGACAGCTGGG	43922130	True	NA	NA	False	AATAAA	-18	NA	43923804	43947582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_43924099_43926934_43927168_43928823_43928890_43932877_43933088_43934605_43934667_43937050_43937273_43939992_43940126_43944690_43944796_43946153
transcript_13948.nic	chr1	-	1068	7	NIC	ENSG00000143436.11	novel	1224	7	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	218.450159583879	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAAGTAAGTGTTGCTT	-151750969	True	NA	-12	True	AATAAA	-13	NA	151763497	151759653	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_151760032_151760815_151760900_151761450_151761553_151762104_151762156_151762375_151762501_151762989_151763147_151763326
transcript_139488.known	chr22	+	1692	15	FSM	ENSG00000100347.15	ENST00000350028.5	1692	15	0	0	0	0	multi-exon	TRUE	canonical	3	485	junction_8	397.76765472177	607	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGCAGCGTGGATGTGGT	43949491	True	NA	26	True	AATAAA	-17	NA	43955441	43996529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_43955599_43963285_43963397_43964451_43964554_43968730_43968819_43972235_43972343_43972870_43973002_43973235_43973324_43976054_43976184_43976749_43976822_43977871_43977959_43981390_43981462_43983932_43984001_43989110_43989258_43990264_43990407_43996337
transcript_13949.known	chr1	-	882	6	FSM	ENSG00000143436.11	ENST00000368829.3	882	6	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	227.558695724861	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCACTGGGGCAGGGAAG	-151750956	True	NA	NA	False	NA	NA	NA	151763484	151759874	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151760182_151760815_151760900_151762104_151762156_151762375_151762501_151762989_151763147_151763326
transcript_139491.known	chr22	-	5419	2	FSM	ENSG00000188636.4	ENST00000341255.4	5419	2	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	0	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGCTACAGCTGTTTCT	-44495896	True	NA	-17	True	ATTAAA	-23	NA	44498233	44492582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_44497812_44498043
transcript_139493.known	chr22	+	2013	15	FSM	ENSG00000248405.10	ENST00000361473.9	2013	15	0	0	0	0	multi-exon	FALSE	canonical	1	14	junction_4	156.93830843061	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTAAAAATAACCAGCCAT	44701200	True	NA	-5	True	NA	NA	NA	44702232	44862671	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_44702609_44714590_44714672_44725243_44725293_44726576_44726635_44786456_44786607_44802076_44802165_44808306_44808439_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44859730_44859835_44862274
transcript_139502.known	chr22	+	905	9	FSM	ENSG00000186654.21	ENST00000432186.5	905	9	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_1	36.8474473335671	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCCGCAGGCACTCTGTG	NA	False	NA	NA	False	NA	NA	NA	44668712	44736909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_44668806_44702491_44702609_44714590_44714672_44725243_44725293_44726576_44726635_44731729_44731822_44732250_44732392_44735026_44735163_44736771
transcript_139503.known	chr22	+	1767	9	FSM	ENSG00000186654.21	ENST00000006251.11	1767	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	38.9863758254085	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGTCTGCAGTGCCTG	44677017	False	NA	11	True	AATAAA	-14	NA	44677056	44737680	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_44677241_44702491_44702609_44714590_44714672_44725243_44725293_44726576_44726635_44731729_44731822_44732250_44732392_44735026_44735163_44736771
transcript_139505.known	chr22	+	881	9	FSM	ENSG00000186654.21	ENST00000457960.5	881	9	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	37.7615876255223	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTCCCGCTCGGGGGAC	44701185	True	NA	NA	False	NA	NA	NA	44702217	44736786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_44702410_44702491_44702609_44714590_44714672_44725243_44725293_44726576_44726635_44731729_44731822_44732250_44732392_44735026_44735163_44736771
transcript_139512.known	chr22	+	1612	8	FSM	ENSG00000186654.21	ENST00000431834.5	1612	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	40.6849518387628	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCAGGCATCTGAGTCGG	44701186	True	NA	NA	False	NA	NA	NA	44702218	44737441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_44702609_44714590_44714672_44725243_44725293_44726576_44726635_44731734_44731822_44732250_44732392_44735026_44735163_44736771
transcript_139514.known	chr22	+	1430	7	FSM	ENSG00000186654.21	ENST00000432916.5	1430	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	49.185589578882	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAACCTGTCAACCTGGC	44701453	False	NA	-7	True	NA	NA	NA	44702485	44737662	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_44702609_44714590_44714672_44725243_44725293_44726576_44726635_44731734_44731822_44732250_44732392_44736771
transcript_139515.known	chr22	+	1041	7	FSM	ENSG00000186654.21	ENST00000477331.5	1041	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	45.8657461147932	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCTCTGGGGGCCGGCAG	44701487	False	NA	NA	False	GGGGCT	-19	NA	44702519	44737215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_44702609_44714590_44714672_44726576_44726635_44731729_44731822_44732250_44732392_44735026_44735163_44736771
transcript_139521.nnic	chr22	+	1512	5	NIC	ENSG00000186654.21	novel	1430	7	NA	NA	-12	-2	intron_retention	FALSE	canonical	2	10	junction_4	51.348685474898	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCATGTCTGCAGTGCC	44701159	True	NA	9	True	AATAAA	-12	NA	44702191	44737678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_44702609_44714590_44714672_44725243_44725293_44726576_44726635_44736771
transcript_139523.known	chr22	+	1725	13	FSM	ENSG00000241484.10	ENST00000389774.6	1725	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	162.131291105559	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTGTTAGGATGGATG	44744905	True	NA	108	True	NA	NA	NA	44752557	44862784	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_44752628_44786456_44786607_44802076_44802165_44808306_44808439_44809005_44809099_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44859730_44859835_44862274
transcript_139528.known	chr22	+	1615	12	FSM	ENSG00000241484.10	ENST00000356099.11	1615	12	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_1	61.6253677507341	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTGTTAGGATGGATG	44744922	True	NA	108	True	NA	NA	NA	44752574	44862784	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_44752628_44786456_44786607_44802076_44802165_44808306_44808439_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44859730_44859835_44862274
transcript_13953.known	chr1	+	992	2	FSM	ENSG00000203288.5	ENST00000389897.3	992	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTTGTGTCTGGCTTCC	151790575	True	NA	6	True	TATAAA	-20	NA	151790841	151794402	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_151791246_151793814
transcript_139532.known	chr22	+	1487	11	FSM	ENSG00000241484.10	ENST00000336963.8	1487	11	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_10	117.379725676967	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTAGGATGGATGTTTT	44744950	True	NA	112	True	NA	NA	NA	44752602	44862788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_44752628_44786456_44786607_44802076_44802165_44808306_44808439_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44862274
transcript_139535.known	chr22	+	2905	10	FSM	ENSG00000241484.10	ENST00000460809.5	2905	10	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_1	38.1307043900837	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	44744921	True	NA	NA	False	NA	NA	NA	44752573	44850963	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_44752628_44786456_44786607_44802076_44802165_44808306_44808439_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931
transcript_13954.known	chr1	-	1264	7	FSM	ENSG00000143436.11	ENST00000467306.5	1264	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	229.626810765255	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTTGCTTACTGGTC	-151750968	True	NA	-5	True	AATAAA	-20	NA	151763496	151759646	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151760182_151760815_151760900_151761450_151761553_151762104_151762156_151762375_151762501_151762949_151763147_151763326
transcript_139542.known	chr22	+	1474	10	FSM	ENSG00000241484.10	ENST00000389772.8	1474	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	137.443950416789	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTGTTAGGATGGATG	44786412	True	NA	108	True	NA	NA	NA	44786456	44862784	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_44786607_44808306_44808439_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44859730_44859835_44862274
transcript_139543.known	chr22	-	3540	13	FSM	ENSG00000056487.16	ENST00000396103.7	3540	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	17.4409718765899	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGGTTTTGGTGTCC	-45008971	False	NA	-3	True	ATTAAA	-20	NA	45008993	44881161	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_44883305_44885425_44885530_44885862_44885939_44887962_44888122_44889759_44889783_44891305_44891361_44893456_44893534_44896031_44896084_44913821_44913963_44916279_44916631_44920397_44920491_45008544_45008611_45008793
transcript_139544.known	chr22	-	3491	13	FSM	ENSG00000056487.16	ENST00000629843.2	3491	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	16.7049560177678	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCCTGTGGTTTTGGTG	-45009627	False	NA	-6	True	ATTAAA	-17	NA	45009649	44881164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_44883305_44885425_44885530_44885862_44885939_44887962_44888122_44889759_44889783_44891305_44891361_44893456_44893534_44896031_44896084_44913821_44913963_44916279_44916631_44920397_44920491_45008544_45008611_45009495
transcript_13955.known	chr1	-	3055	10	FSM	ENSG00000143365.19	ENST00000356728.11	3055	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.666666666666667	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTGTGTGTCAGAGGG	-151826058	True	NA	NA	False	TATAAA	-17	NA	151826096	151806070	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151807634_151811324_151811435_151812946_151813058_151813238_151813347_151813487_151813621_151814573_151814696_151814912_151815426_151816663_151816806_151817194_151817281_151825929
transcript_139572.known	chr22	+	5151	8	FSM	ENSG00000093000.19	ENST00000347635.9	5151	8	0	0	0	0	multi-exon	FALSE	canonical	3	614	junction_2	78.4724051329315	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGAGTCTTATGTTCCT	45149723	True	NA	NA	False	AATAAA	-23	NA	45163924	45188017	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_45164297_45168167_45168247_45171599_45171684_45175893_45176081_45178237_45178901_45181285_45181368_45183401_45183521_45184452
transcript_139588.known	chr22	+	2059	9	FSM	ENSG00000093000.19	ENST00000407019.6	2059	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	304.263223829302	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCACTCTCCCTTCTTAAG	45149784	True	NA	-51	True	AATAAA	-27	NA	45163985	45184830	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_45164297_45168167_45168247_45170987_45171144_45171599_45171684_45175893_45176081_45178237_45178901_45181285_45181368_45183401_45183521_45184452
transcript_139590.nnic	chr22	-	2708	11	NNC	ENSG00000100364.19	novel	6338	10	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	131.882864694395	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCTCAGTTTGCCCAC	-45238539	True	NA	-15	True	ATTAAA	-20	NA	45240944	45195827	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_45197217_45197789_45197949_45199872_45200036_45202989_45203185_45203844_45203986_45205216_45205319_45205629_45205708_45205792_45205913_45211955_45212108_45240639_45240764_45240859
transcript_139593.known	chr22	-	6338	10	FSM	ENSG00000100364.19	ENST00000336156.10	6338	10	0	0	0	0	multi-exon	FALSE	canonical	3	405	junction_4	19.0910747681336	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCTCTAATCTTTTTCT	-45238489	True	NA	-11	True	ATTAAA	-16	NA	45240894	45192243	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_45197217_45197789_45197949_45199872_45200036_45202989_45203185_45203844_45203986_45205216_45205319_45205629_45205708_45205792_45205913_45211955_45212108_45240639
transcript_139594.known	chr22	-	2723	10	FSM	ENSG00000100364.19	ENST00000251993.11	2723	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	138.468608556436	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCTCAGTTTGCCCAC	NA	False	NA	-15	True	ATTAAA	-20	NA	45212488	45195827	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_45197217_45197789_45197949_45199872_45200036_45202989_45203185_45203844_45203986_45205216_45205319_45205629_45205708_45205792_45205913_45211955_45212108_45212264
transcript_139599.known	chr22	+	1084	6	FSM	ENSG00000100373.10	ENST00000216211.9	1084	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.489897948556636	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCAGTAACTACTTACAGA	45284922	True	NA	NA	False	AATAAA	-19	NA	45284948	45295874	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_45285066_45285940_45286097_45287171_45287452_45289060_45289144_45293180_45293314_45295559
transcript_139606.nnic	chr22	+	3197	10	NIC	ENSG00000100376.12	novel	2883	9	NA	NA	-140	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	39.5614851984997	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGCTCAGTGTTTC	45309760	False	NA	3	True	AATAAA	-14	NA	45309793	45341955	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_45310184_45322041_45322216_45322370_45322427_45323174_45323428_45327841_45328064_45330602_45330732_45332424_45332711_45335349_45335383_45336327_45336412_45340385
transcript_139608.known	chr22	+	2883	9	FSM	ENSG00000100376.12	ENST00000441876.7	2883	9	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_4	6.5	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGCTCAGTGTTTC	45308117	True	NA	3	True	AATAAA	-14	NA	45309933	45341955	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_45310184_45322370_45322427_45323174_45323428_45327841_45328064_45330602_45330732_45332424_45332711_45335349_45335383_45336327_45336412_45340385
transcript_139622.nnic	chr22	+	2751	8	NIC	ENSG00000100376.12	novel	2883	9	NA	NA	-90	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	30.2263569267159	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGCTCAGTGTTTC	45308027	True	NA	3	True	AATAAA	-14	NA	45309843	45341955	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_45310184_45322370_45322427_45323174_45323428_45330602_45330732_45332424_45332711_45335349_45335383_45336327_45336412_45340385
transcript_139627.nnic	chr22	+	2686	7	NIC	ENSG00000100376.12	novel	2883	9	NA	NA	-154	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_3	35.6277045756997	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGCTCAGTGTTTC	45309746	False	NA	3	True	AATAAA	-14	NA	45309779	45341955	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_45310184_45322370_45322427_45323174_45323428_45332424_45332711_45335349_45335383_45336327_45336412_45340385
transcript_139631.nnic	chr22	+	1207	5	NNC	ENSG00000100376.12	novel	1612	5	NA	NA	-13	563	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	45.3231453012696	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTGAGACTGGGTAATAT	45308104	True	NA	NA	False	AAAAAG	-4	NA	45309920	45328804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_+_45310184_45322370_45322427_45323174_45323428_45327841_45328004_45328331
transcript_139634.known	chr22	+	1490	7	FSM	ENSG00000128408.9	ENST00000614167.2	1490	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	1.46249406456535	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTGTATTTCTGTGAGG	45413440	True	NA	104	True	AAAACA	-14	NA	45413692	45432509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_45414016_45414321_45414404_45417601_45417947_45422289_45422409_45425947_45426176_45430899_45431067_45432283
transcript_139640.known	chr22	+	2904	17	FSM	ENSG00000077942.19	ENST00000327858.11	2904	17	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_14	293.539066554607	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCTGTGCATGAGAGTCT	45487791	True	NA	18	True	AATAAA	-21	NA	45502882	45601135	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_45503065_45518681_45518788_45525542_45525679_45527846_45528010_45531264_45531325_45533062_45533165_45533760_45533899_45535199_45535338_45541228_45541373_45542154_45542284_45543400_45543527_45547084_45547205_45548612_45548745_45550491_45550616_45574510_45574654_45576976_45577109_45600306
transcript_139643.known	chr22	+	2251	15	FSM	ENSG00000077942.19	ENST00000262722.11	2251	15	0	0	0	0	multi-exon	FALSE	canonical	3	816	junction_14	78.60921169472	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCGCGTGCCTTGGTTTT	45487791	True	NA	37	True	AATAAA	-27	NA	45502882	45563362	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_45503065_45518681_45518788_45525542_45525679_45527846_45528010_45531264_45531325_45533062_45533165_45533760_45533899_45535199_45535338_45541228_45541373_45542154_45542284_45543400_45543527_45547084_45547205_45548612_45548745_45550491_45550616_45562911
transcript_13965.nnic	chr1	+	2040	4	NNC	ENSG00000234614.1	novel	506	3	NA	NA	-3008	1161	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	2.86744175568088	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCATCAAAGTTCTGATTT	151838818	False	NA	7	True	AGTAAA	-22	NA	151838868	151851546	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_151839106_151841740_151842032_151844044_151844243_151850232
transcript_139654.known	chr22	+	3294	12	FSM	ENSG00000130638.17	ENST00000252934.10	3294	12	0	0	0	0	multi-exon	FALSE	canonical	3	795	junction_4	72.335535887046	897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGGGTAATGGTTATGT	45658551	True	NA	NA	False	AATAAA	-26	NA	45671833	45845307	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_45672180_45689711_45689904_45692995_45693079_45700281_45700379_45702688_45702848_45718412_45718494_45729424_45729591_45738730_45738840_45740368_45740539_45806958_45807023_45842990_45843179_45843668
transcript_139666.known	chr22	+	3135	11	FSM	ENSG00000130638.17	ENST00000381061.8	3135	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	285.1744203115	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAATGGGGTAATGGTTA	NA	False	NA	NA	False	AATAAA	-23	NA	45671797	45845304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_45672180_45692995_45693079_45700281_45700379_45702688_45702848_45718412_45718494_45729424_45729591_45738730_45738840_45740368_45740539_45806958_45807023_45842990_45843179_45843668
transcript_139669.nic	chr22	+	2742	10	ISM	ENSG00000130638.17	ENST00000252934.10	3294	12	-59	37069	-23	-3556	5prime_fragment	FALSE	canonical	3	795	junction_4	71.7337326162645	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTAGTCATGGGAAAGC	NA	False	NA	NA	False	AAAAAG	-19	NA	45671774	45808238	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_45672180_45689711_45689904_45692995_45693079_45700281_45700379_45702688_45702848_45718412_45718494_45729424_45729591_45738730_45738840_45740368_45740539_45806958
transcript_139679.known	chr22	+	1207	2	FSM	ENSG00000273145.1	ENST00000608290.1	1207	2	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGATTTTTGTCTTTTTGT	46013400	True	NA	25	True	CATAAA	-19	NA	46013605	46015498	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_46013811_46014496
transcript_13969.known	chr1	-	4798	6	FSM	ENSG00000159445.13	ENST00000368814.8	4798	6	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_4	20.2128671889962	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTGTTGGAAGAATTTT	-151908152	True	NA	NA	False	AATAAA	-21	NA	151909511	151870865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151874929_151877000_151877126_151888272_151888384_151889213_151889374_151895007_151895195_151909359
transcript_139691.known	chr22	-	1600	5	FSM	ENSG00000205643.11	ENST00000381037.4	1600	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	51.5388203202208	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGCACTGATGGACTTT	-46248790	True	NA	-20	True	AATAAA	-14	NA	46250289	46244020	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_46245239_46246672_46246796_46247109_46247222_46248171_46248285_46250255
transcript_139692.nnic	chr22	-	2396	4	NNC	ENSG00000205643.11	novel	1489	4	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	56.3698106751793	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGGACTTTAAGATGCT	NA	False	NA	-12	True	AATAAA	-22	NA	46250333	46244012	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_46245239_46247109_46247222_46248171_46248285_46249388
transcript_139695.known	chr22	-	1489	4	FSM	ENSG00000205643.11	ENST00000314567.8	1489	4	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_3	23.8932812499432	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGGACTTTAAGATGCT	-46248794	True	NA	-12	True	AATAAA	-22	NA	46250293	46244012	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_46245239_46247109_46247222_46248171_46248285_46250255
transcript_139697.known	chr22	-	498	3	FSM	ENSG00000205643.11	ENST00000474256.1	498	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	49	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGAGGGTAGTCCAAAGG	-46248812	True	NA	NA	False	NA	NA	NA	46250311	46244908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_46245239_46247109_46247222_46250255
transcript_139698.nnic	chr22	-	1403	3	NIC	ENSG00000205643.11	novel	1489	4	NA	NA	-11	-3	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	35	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTGATGGACTTTAAGAT	-46248823	True	NA	-15	True	AATAAA	-19	NA	46250322	46244015	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_46245239_46248171_46248285_46250255
transcript_139700.known	chr22	-	655	2	FSM	ENSG00000205643.11	ENST00000475605.1	655	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGGGGATAGAATTTTTA	-46248795	True	NA	-106	True	NA	NA	NA	46250294	46244622	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_46245239_46250255
transcript_139710.nic	chr22	+	3064	15	NIC	ENSG00000075234.17	novel	2566	14	NA	NA	-325	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_13	54.5782063853778	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGAGCATCTGTGGTG	46267606	False	NA	10	True	ATTAAA	-23	NA	46267635	46294008	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_46268073_46268513_46268592_46272334_46272417_46273897_46274070_46275247_46275422_46278585_46278662_46281598_46281719_46283972_46284033_46285240_46285280_46287072_46287155_46288422_46288589_46289401_46289562_46289825_46289900_46292202_46292329_46292790
transcript_139716.known	chr22	+	2566	14	FSM	ENSG00000075234.17	ENST00000381031.8	2566	14	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_13	15.9351496410558	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGAGCATCTGTGGTG	46265302	True	NA	10	True	ATTAAA	-23	NA	46268007	46294008	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_46268073_46268513_46268592_46272334_46272417_46273897_46274070_46275247_46275422_46278585_46278662_46281598_46281719_46283972_46284033_46285240_46285280_46287072_46287155_46288422_46288589_46289401_46289562_46289825_46289900_46292790
transcript_139722.known	chr22	-	1518	1	FSM	ENSG00000277232.2	ENST00000623117.1	1518	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGCGTCAGGTATTTCTT	-46296606	True	NA	NA	False	ATTAAA	-16	NA	46296660	46295142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_46295100_46296700
transcript_139726.known	chr22	+	2983	12	FSM	ENSG00000075218.19	ENST00000454366.2	2983	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	64.9816248661722	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGATTTTTAAGCTTATC	46294193	True	NA	22	True	AATAAA	-19	NA	46296869	46330810	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_46296932_46297379_46297480_46308149_46308208_46308318_46308944_46312140_46312306_46313889_46314014_46316031_46316413_46323189_46323263_46326435_46326655_46328687_46328890_46329357_46329568_46330046
transcript_139744.nnic	chr22	+	2783	11	NIC	ENSG00000075218.19	novel	2983	12	NA	NA	-167	-309	combination_of_known_splicesites	TRUE	canonical	0	0	junction_2	67.0060445034625	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTTTAGTAGAAGTTTT	NA	False	NA	NA	False	AAAAAG	-4	NA	46296702	46330501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_46296932_46297379_46297480_46308318_46308944_46312140_46312306_46313889_46314014_46316031_46316413_46323189_46323263_46326435_46326655_46328687_46328890_46329357_46329568_46330046
transcript_139746.nic	chr22	+	2901	11	NIC	ENSG00000075218.19	novel	2983	12	NA	NA	52	180	intron_retention	FALSE	canonical	0	0	junction_1	63.3924285699799	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCGGGTGTGGTAGTGC	46294245	True	NA	NA	False	AATATA	-34	NA	46296921	46330332	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_46297480_46308149_46308208_46308318_46308944_46312140_46312306_46313889_46314014_46316031_46316413_46323189_46323263_46326435_46326655_46328687_46328890_46329357_46329568_46330046
transcript_139747.nic	chr22	+	3070	11	NIC	ENSG00000075218.19	novel	2983	12	NA	NA	52	-309	intron_retention	FALSE	canonical	0	0	junction_1	63.3924285699799	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTTTAGTAGAAGTTTT	46294245	True	NA	NA	False	AAAAAG	-4	NA	46296921	46330501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_46297480_46308149_46308208_46308318_46308944_46312140_46312306_46313889_46314014_46316031_46316413_46323189_46323263_46326435_46326655_46328687_46328890_46329357_46329568_46330046
transcript_139748.nic	chr22	+	3379	11	NIC	ENSG00000075218.19	novel	2983	12	NA	NA	52	0	intron_retention	FALSE	canonical	0	0	junction_1	63.3924285699799	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGATTTTTAAGCTTATC	46294245	True	NA	22	True	AATAAA	-19	NA	46296921	46330810	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_46297480_46308149_46308208_46308318_46308944_46312140_46312306_46313889_46314014_46316031_46316413_46323189_46323263_46326435_46326655_46328687_46328890_46329357_46329568_46330046
transcript_139757.nic	chr22	+	538	4	ISM	ENSG00000075218.19	ENST00000454366.2	2983	12	0	22174	0	-18680	5prime_fragment	FALSE	canonical	0	0	junction_2	85.0215658916411	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATGAAGAAAAGCCCCA	46294193	True	NA	NA	False	AATAAA	-19	NA	46296869	46308636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_46296932_46297379_46297480_46308149_46308208_46308318
transcript_139758.nnic	chr22	+	480	3	NIC	ENSG00000075218.19	novel	2983	12	NA	NA	0	-18680	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	47.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATGAAGAAAAGCCCCA	46294193	True	NA	NA	False	AATAAA	-19	NA	46296869	46308636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_46296932_46297379_46297480_46308318
transcript_139759.nic	chr22	+	934	3	NIC	ENSG00000075218.19	novel	2983	12	NA	NA	52	-18680	intron_retention	FALSE	canonical	0	0	junction_1	104	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATGAAGAAAAGCCCCA	46294245	True	NA	NA	False	AATAAA	-19	NA	46296921	46308636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_46297480_46308149_46308208_46308318
transcript_13976.known	chr1	-	643	2	FSM	ENSG00000159445.13	ENST00000489410.1	643	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCTATTGTCAAGAATAAGA	NA	False	NA	NA	False	AATAAA	-24	NA	151909637	151894829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151895195_151909359
transcript_139775.known	chr22	+	1651	11	FSM	ENSG00000100416.15	ENST00000645190.1	1651	11	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_4	89.1383194815787	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTCTGATCGCTGCTTC	46329596	True	NA	14	True	AATAAA	-17	NA	46335713	46357340	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_46335847_46337778_46337945_46343261_46343369_46346421_46346545_46350290_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
transcript_139776.known	chr22	+	1882	11	FSM	ENSG00000100416.15	ENST00000457572.5	1882	11	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_4	99.991249617154	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATAGTCTGATCGCTGC	46335381	False	NA	11	True	AATAAA	-14	NA	46335424	46357337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_46335847_46337778_46337945_46343261_46343369_46346421_46346545_46350345_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
transcript_139777.nic	chr22	+	1599	11	NIC	ENSG00000100416.15	novel	1882	11	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_4	105.407589859554	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACACATAGTCTGATCGCT	46335658	False	NA	9	True	AATAAA	-12	NA	46335701	46357335	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_46335847_46337778_46337945_46343261_46343369_46346421_46346545_46350349_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
transcript_13978.known	chr1	-	616	3	FSM	ENSG00000197747.9	ENST00000368809.1	616	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	672.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTGAGACAGAATGTTT	-151992548	False	NA	-15	True	AATAAA	-21	NA	151992578	151982917	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151983325_151986098_151986252_151992522
transcript_139785.known	chr22	+	1381	10	FSM	ENSG00000100416.15	ENST00000381019.3	1381	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_9	137.386721014482	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGGCTCTGGCTGCTGG	46329627	True	NA	NA	False	NA	NA	NA	46335744	46357184	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_46335847_46337778_46337945_46343261_46343369_46346421_46346545_46350290_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46356841
transcript_13979.known	chr1	-	671	3	FSM	ENSG00000197747.9	ENST00000368811.8	671	3	0	0	0	0	multi-exon	FALSE	canonical	3	1349	junction_1	44.5	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGACAGAATGTTTGTT	-151975848	True	NA	-12	True	AATAAA	-24	NA	151993859	151982914	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_151983325_151986098_151986252_151993751
transcript_139792.nic	chr22	+	2004	10	NIC	ENSG00000100416.15	novel	1882	11	NA	NA	-12	0	intron_retention	FALSE	canonical	3	136	junction_4	105.220520929576	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACACATAGTCTGATCGCT	46335658	False	NA	9	True	AATAAA	-12	NA	46335701	46357335	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_46335847_46337778_46337945_46343261_46343369_46346421_46346545_46350345_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46356073_46356841
transcript_139799.known	chr22	+	1830	10	FSM	ENSG00000100416.15	ENST00000381021.7	1830	10	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_3	101.647660639979	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATAGTCTGATCGCTGC	46335381	False	NA	11	True	AATAAA	-14	NA	46335424	46357337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_46335847_46337778_46337945_46346421_46346545_46350290_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
transcript_139803.known	chr22	+	1775	10	FSM	ENSG00000100416.15	ENST00000453630.5	1775	10	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_3	112.296235219372	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATAGTCTGATCGCTGC	46335381	False	NA	11	True	AATAAA	-14	NA	46335424	46357337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_46335847_46337778_46337945_46346421_46346545_46350345_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
transcript_139807.known	chr22	+	1793	10	FSM	ENSG00000100416.15	ENST00000441818.5	1793	10	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_3	117.65780052632	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACACATAGTCTGATCGCT	46335357	False	NA	9	True	AATAAA	-12	NA	46335400	46357335	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_46335847_46337778_46337945_46346421_46346545_46350349_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
transcript_13981.known	chr1	-	563	3	FSM	ENSG00000163191.6	ENST00000271638.3	563	3	0	0	0	0	multi-exon	FALSE	canonical	3	4544	junction_2	134.5	836	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAGAGTTGGTGAATTTG	-152014754	True	NA	-2	True	AATAAA	-27	NA	152037004	152032505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_152032824_152033647_152033801_152036912
transcript_139813.nic	chr22	+	2767	9	ISM	ENSG00000100416.15	ENST00000457572.5	1882	11	285	0	-4	0	intron_retention	FALSE	canonical	3	136	junction_4	106.561015385553	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATAGTCTGATCGCTGC	46329592	True	NA	11	True	AATAAA	-14	NA	46335709	46357337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_46335847_46337778_46337945_46343261_46343369_46346421_46346545_46350345_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443
transcript_13982.known	chr1	-	673	4	FSM	ENSG00000197956.10	ENST00000368720.6	673	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	202.703943940144	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGCGTCCTGGCTTCCG	-153534313	False	1931	-8	True	AATAAA	-20	NA	153536244	153534598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153534831_153535201_153535361_153535788_153535934_153536107
transcript_139825.known	chr22	+	1688	9	FSM	ENSG00000100416.15	ENST00000456595.5	1688	9	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_8	159.849880747531	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATAGTCTGATCGCTGC	46335381	False	NA	11	True	AATAAA	-14	NA	46335424	46357337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_46335847_46337778_46337945_46346421_46346545_46350349_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46356841
transcript_13983.known	chr1	-	673	3	FSM	ENSG00000197956.10	ENST00000496817.5	673	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	212.5	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGCGTCCTGGCTTCCG	-153534284	False	NA	-8	True	AATAAA	-20	NA	153536215	153534598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153534831_153535201_153535376_153535948
transcript_139831.known	chr22	+	1376	8	FSM	ENSG00000100416.15	ENST00000645026.1	1376	8	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_4	100.288766742312	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCAGGGCCGCTCAGTGG	46329596	True	NA	NA	False	NA	NA	NA	46335713	46354319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_46335847_46337778_46337945_46343261_46343369_46346421_46346545_46350290_46350464_46352120_46352175_46352263_46352331_46353766
transcript_13984.nnic	chr1	-	706	3	NNC	ENSG00000197956.10	novel	673	4	NA	NA	-187	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	206	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGCGTCCTGGCTTCCG	-153534500	False	144	-8	True	AATAAA	-20	NA	153536431	153534598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_153534831_153535201_153535361_153536116
transcript_139841.nic	chr22	+	2668	8	ISM	ENSG00000100416.15	ENST00000453630.5	1775	10	277	0	-12	0	intron_retention	FALSE	canonical	3	136	junction_3	121.905115326869	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATAGTCTGATCGCTGC	46335658	False	NA	11	True	AATAAA	-14	NA	46335701	46357337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_46335847_46337778_46337945_46346421_46346545_46350345_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443
transcript_13985.nnic	chr1	-	605	3	NNC	ENSG00000197956.10	novel	673	4	NA	NA	-99	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	213.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGCGTCCTGGCTTCCG	-153534412	False	NA	-8	True	AATAAA	-20	NA	153536343	153534598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_153534831_153535201_153535361_153536129
transcript_139858.known	chr22	+	1476	2	FSM	ENSG00000100416.15	ENST00000476901.1	1476	2	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCTCAGGTACTTTGGG	46330863	False	NA	15	True	AATAAA	-16	NA	46330874	46333699	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_46331733_46333081
transcript_139859.known	chr22	+	591	2	FSM	ENSG00000100416.15	ENST00000493556.2	591	2	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTTGCCCAGTTAGGA	46335645	False	NA	NA	False	NA	NA	NA	46335688	46338211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_46335847_46337778
transcript_13986.known	chr1	+	531	2	FSM	ENSG00000238279.2	ENST00000420695.2	709	2	164	14	164	-14	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGCACCTGGCACCTCTC	153533575	False	NA	NA	False	NA	NA	NA	153533602	153535115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_153533922_153534903
transcript_139861.known	chr22	-	3610	5	FSM	ENSG00000075275.18	ENST00000473624.2	3610	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	8.27647267862342	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCGGTGCTGGTTTTT	NA	False	NA	0	True	AATAAA	-21	NA	46366438	46361173	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_46364252_46364511_46364737_46365230_46365381_46365585_46365690_46366385
transcript_139867.nnic	chr22	-	4021	14	NNC	ENSG00000100422.14	novel	4442	13	NA	NA	-45	-3	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	57.8199613368435	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTTGGCTTGCTTTCTTT	-46733787	True	NA	-8	True	AATAAA	-12	NA	46738297	46684412	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_46686640_46687102_46687207_46689991_46690201_46691571_46691778_46693426_46693504_46695209_46695316_46699312_46699466_46701635_46701711_46707842_46707989_46711085_46711150_46712167_46712294_46720085_46720209_46720901_46721016_46738006
transcript_13987.known	chr1	-	513	3	FSM	ENSG00000196154.12	ENST00000368716.9	513	3	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_2	19.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGATGGTTTGAGAGA	-153543875	True	NA	-7	True	AATAAA	-17	NA	153545806	153543620	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153543924_153544653_153544810_153545752
transcript_139873.known	chr22	-	4442	13	FSM	ENSG00000100422.14	ENST00000216264.13	4442	13	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_12	18.0462369115189	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCTTGCTTTCTTTCCT	-46733742	True	NA	-5	True	AATAAA	-15	NA	46738252	46684409	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_46687207_46689991_46690201_46691571_46691778_46693426_46693504_46695209_46695316_46699312_46699466_46701635_46701711_46707842_46707989_46711085_46711150_46712167_46712294_46720085_46720209_46720901_46721016_46738006
transcript_13988.known	chr1	-	573	3	FSM	ENSG00000196154.12	ENST00000368715.5	573	3	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_2	93	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGAGAGACTCTGGGG	-153543132	False	1931	1	True	AATAAA	-25	NA	153545063	153543612	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153543924_153544653_153544810_153544957
transcript_139887.known	chr22	-	434	2	FSM	ENSG00000100422.14	ENST00000460254.1	434	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGCAAAACACACTTAGACAA	-46738059	False	NA	NA	False	NA	NA	NA	46738090	46735158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_46735509_46738006
transcript_139888.known	chr22	-	670	1	FSM	ENSG00000260708.1	ENST00000564152.1	670	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTTTAAAATTATTTTT	-46760954	True	NA	-8	True	AATAAA	-32	NA	46762563	46761893	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_46761900_46762600
transcript_139889.nnic	chr22	+	2277	14	NNC	ENSG00000054611.14	novel	3934	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	48.2395403630452	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGACCGAGACGTTGCGC	NA	False	NA	19	True	AATAAA	-13	NA	46762616	47174083	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_+_46762849_46792519_46792577_46793500_46793842_46797443_46797621_46878652_46878724_46891265_46891395_46894783_46894847_46912073_46912189_46974289_46974400_46990014_46990111_46997633_46997710_47037070_47037199_47111507_47111604_47173497
transcript_139891.known	chr22	+	3758	13	FSM	ENSG00000054611.14	ENST00000337137.9	3758	13	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	14.7843291660085	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCGGCCTTGGCCTGTGA	46759937	True	NA	6	True	AATAAA	-14	NA	46762649	47175693	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_46762849_46792519_46792577_46793500_46793842_46797443_46797621_46878652_46878724_46891265_46891395_46894783_46894847_46912073_46912189_46974289_46974400_46997633_46997710_47037070_47037199_47111507_47111604_47173497
transcript_139895.known	chr22	+	1949	12	FSM	ENSG00000054611.14	ENST00000407381.7	1949	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	39.3402197828378	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGACCGAGACGTTGCGC	46759959	True	NA	19	True	AATAAA	-13	NA	46762671	47174083	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_46762849_46792519_46792577_46793500_46793842_46878652_46878724_46891265_46891395_46894783_46894847_46912073_46912189_46974289_46974400_46997633_46997710_47037070_47037199_47111507_47111604_47173497
transcript_13991.known	chr1	-	956	3	FSM	ENSG00000188643.11	ENST00000368705.2	956	3	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_2	80	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTACCTCCCTCCCTGGGGG	-153609151	False	1024	NA	False	NA	NA	NA	153609344	153607361	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153607693_153607998_153608178_153608898
transcript_139913.nic	chr22	+	935	6	ISM	ENSG00000054611.14	ENST00000337137.9	3758	13	-33	284371	0	97547	5prime_fragment	TRUE	canonical	3	103	junction_1	18.1482781552411	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATTTTGCATTTATTGA	NA	False	NA	NA	False	AAAACA	-5	NA	46762616	46891322	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_+_46762849_46792519_46792577_46793500_46793842_46797443_46797621_46878652_46878724_46891265
transcript_139915.known	chr22	+	2524	4	FSM	ENSG00000219438.9	ENST00000402357.6	2524	4	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_1	23.9211668240122	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGGCTTTTGTTCCCTGG	48489461	True	NA	6	True	AATAAA	-19	NA	48489552	48751932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_48489705_48646596_48646747_48707716_48707845_48749838
transcript_139918.known	chr22	+	2638	4	FSM	ENSG00000219438.9	ENST00000358295.9	2638	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	180.77671924842	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGGCTTTTGTTCCCTGG	48576240	True	NA	6	True	AATAAA	-19	NA	48576305	48751932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_48576572_48646596_48646747_48707716_48707845_48749838
transcript_13992.known	chr1	-	1146	3	FSM	ENSG00000188643.11	ENST00000368704.5	1146	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	73	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTTATGCTTTGGTGGTC	-153609144	False	1024	-6	True	ATTAAA	-21	NA	153609337	153606885	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153607693_153607998_153608178_153609177
transcript_139922.known	chr22	-	3281	3	FSM	ENSG00000286381.1	ENST00000669789.1	3281	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCATAGACCTGTTAGTCAA	-49052243	True	NA	NA	False	NA	NA	NA	49052403	49047782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_49048950_49049394_49049461_49050355
transcript_139923.known	chr22	-	3013	2	FSM	ENSG00000286381.1	ENST00000665699.1	3013	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACAGGGATGCCCGCTTC	-49052058	False	NA	NA	False	NA	NA	NA	49052069	49047650	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_49048950_49050355
transcript_139924.known	chr22	-	4550	13	FSM	ENSG00000100425.19	ENST00000404760.6	4911	13	361	0	361	0	multi-exon	FALSE	canonical	3	19	junction_6	41.6342373800965	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTGTGGCCATTTTATTCC	-49824209	False	NA	-10	True	AATAAA	-14	NA	49827512	49773282	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_49774417_49775590_49775746_49776049_49776160_49777033_49777162_49777677_49777814_49787389_49787888_49794033_49794295_49797804_49798118_49798557_49798687_49798987_49799120_49804203_49804361_49822950_49824332_49827496
transcript_139925.known	chr22	+	6893	2	FSM	ENSG00000100426.7	ENST00000216268.6	6893	2	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	0	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGGCTTATGTTTGTAAT	49851373	True	NA	27	True	AATAAA	-23	NA	49853843	49890080	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_49853990_49883333
transcript_13993.known	chr1	-	1172	3	FSM	ENSG00000188643.11	ENST00000368706.9	1172	3	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	28	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTTATGCTTTGGTGGTC	-153612113	True	NA	-6	True	ATTAAA	-21	NA	153613137	153606885	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153607693_153607998_153608178_153612951
transcript_139930.known	chr22	+	1577	11	FSM	ENSG00000184164.15	ENST00000404488.7	1577	11	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	211.095736574664	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGCGTGGGTTTGTCTCAT	49913855	True	NA	41	True	AATAAA	-31	NA	49918634	49927540	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_49918899_49919229_49919313_49919729_49919841_49920155_49920248_49921584_49921762_49922296_49922444_49922611_49922708_49923233_49923318_49924359_49924456_49925416_49925558_49927254
transcript_13994.known	chr1	-	1054	4	FSM	ENSG00000189334.9	ENST00000344616.4	1054	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	3.55902608401044	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTGTCTTGACTGGACA	-153616132	True	NA	3	True	AATAAA	-21	NA	153616325	153614254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153615023_153615234_153615382_153615828_153615937_153616294
transcript_139941.known	chr22	+	1428	10	FSM	ENSG00000184164.15	ENST00000328268.9	1428	10	0	0	0	0	multi-exon	FALSE	canonical	3	470	junction_5	82.4802258382031	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGGGCGTGGGTTTGTCT	49913854	True	NA	38	True	AATAAA	-28	NA	49918633	49927537	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_49918899_49919229_49919313_49919729_49919841_49920155_49920248_49921584_49921762_49922611_49922708_49923233_49923318_49924359_49924456_49925416_49925558_49927254
transcript_139948.known	chr22	-	5330	10	FSM	ENSG00000182858.14	ENST00000330817.11	5330	10	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_3	24.6671671620896	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCTCTTTCCTAGACGG	-49915651	True	NA	-16	True	GATAAA	-14	NA	49918438	49900228	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_49904067_49904178_49904255_49904336_49904507_49907720_49907945_49909243_49909348_49909893_49910089_49910433_49910608_49913384_49913518_49913603_49913844_49918262
transcript_139955.known	chr22	+	1994	9	FSM	ENSG00000184164.15	ENST00000483652.5	1994	9	0	0	0	0	multi-exon	FALSE	canonical	3	470	junction_5	87.2997709046249	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGAACTGAGGGGTTAGC	49913953	True	NA	NA	False	AATAAA	-45	NA	49918732	49926505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_49918899_49919229_49919313_49919729_49919841_49920155_49920248_49921584_49921762_49922611_49922708_49923233_49923318_49924359_49924456_49925416
transcript_139958.known	chr22	+	1242	9	FSM	ENSG00000184164.15	ENST00000403427.3	1242	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_6	198.519520450761	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGAACGGGCGTGGGTTTG	49913953	True	NA	35	True	AATAAA	-25	NA	49918732	49927534	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_49918899_49919229_49919313_49919729_49919841_49920155_49920248_49921584_49921762_49922611_49922708_49924359_49924456_49925416_49925558_49927254
transcript_139963.nic	chr22	-	2365	9	NIC	ENSG00000182858.14	novel	5330	10	NA	NA	-32	434	intron_retention	FALSE	canonical	3	20	junction_2	54.2354531187857	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATTACAGAAAATAATGAGA	NA	False	NA	-38	True	AATAAA	-21	NA	49918470	49903215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_49904255_49904336_49904385_49907720_49907945_49909243_49909348_49909893_49910089_49910433_49910608_49913384_49913518_49913603_49913844_49918262
transcript_139965.nic	chr22	-	2487	9	NIC	ENSG00000182858.14	novel	5330	10	NA	NA	-32	434	intron_retention	FALSE	canonical	3	136	junction_2	25.0021874043052	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATTACAGAAAATAATGAGA	NA	False	NA	-38	True	AATAAA	-21	NA	49918470	49903215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_49904255_49904336_49904507_49907720_49907945_49909243_49909348_49909893_49910089_49910433_49910608_49913384_49913518_49913603_49913844_49918262
transcript_139973.known	chr22	+	855	7	FSM	ENSG00000184164.15	ENST00000482956.5	855	7	0	0	0	0	multi-exon	FALSE	canonical	3	470	junction_5	44.7362641861536	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACTTCCATACATCCTG	49913990	False	NA	NA	False	NA	NA	NA	49918769	49923400	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_49918899_49919229_49919313_49919729_49919841_49920155_49920248_49921584_49921762_49922611_49922708_49923233
transcript_139977.known	chr22	+	2102	6	FSM	ENSG00000198355.5	ENST00000360612.5	2102	6	0	0	0	0	multi-exon	TRUE	canonical	3	352	junction_1	22.4908870434227	508	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATAATCCTGTATTTAT	49958718	True	NA	19	True	ATTAAA	-16	NA	49960771	49964072	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_49961033_49961124_49961235_49961317_49961369_49961441_49961812_49962688_49962866_49962939
transcript_139978.known	chr22	+	3052	3	FSM	ENSG00000073150.14	ENST00000395842.3	3052	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCTCCGCCGGGGACT	50170573	True	NA	11	True	AATAAA	-18	NA	50170730	50180295	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_50170957_50176938_50178403_50178933
transcript_139987.known	chr22	+	2329	10	FSM	ENSG00000170638.10	ENST00000303434.8	2329	10	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	124.403862430611	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTGTGACGTGTGAAC	50179482	True	NA	19	True	AATAAA	-19	NA	50185916	50199598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_50186002_50193026_50193094_50193575_50193655_50194339_50194507_50194899_50195041_50197240_50197352_50197448_50197589_50197822_50197996_50198074_50198187_50198344
transcript_13999.known	chr1	+	2165	6	FSM	ENSG00000160679.13	ENST00000368690.7	2165	6	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_3	157.105824207761	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGGACTCTCTTTATTT	153633923	False	NA	16	True	NA	NA	NA	153633981	153646305	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_153634344_153636571_153636654_153638294_153638449_153642242_153642430_153643226_153643365_153645063
transcript_139996.known	chr22	+	2305	10	FSM	ENSG00000170638.10	ENST00000380909.9	2305	10	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_1	72.8755069016528	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTTTTGTGACGTGTG	50179478	True	NA	16	True	AATAAA	-16	NA	50185912	50199595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_50185977_50193026_50193094_50193575_50193655_50194339_50194507_50194899_50195041_50197240_50197352_50197448_50197589_50197822_50197996_50198074_50198187_50198344
transcript_14.known	ERCC-00042	+	1007	1	FSM	ERCC-00042A	DQ516783	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	213	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AAAACA	-5	NA	0	1007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00042_+_0_1000
transcript_140.known	SIRV5	+	2474	18	FSM	SIRV5A	SIRV510	2474	18	0	0	0	0	multi-exon	FALSE	canonical	3	1710	junction_17	3356.7859535151	1859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAGTAACCTTGGTAACT	NA	False	NA	NA	False	AGTAAA	-11	NA	1028	11867	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858_10992_11133
transcript_140002.known	chr22	+	2172	10	FSM	ENSG00000170638.10	ENST00000395827.5	2172	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	154.163533501696	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGTGCCGACTCGGT	50190456	False	NA	NA	False	NA	NA	NA	50190597	50199475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_50190649_50193026_50193094_50193575_50193655_50194339_50194507_50194899_50195041_50197240_50197352_50197448_50197589_50197822_50197996_50198074_50198187_50198344
transcript_140008.known	chr22	+	2404	9	FSM	ENSG00000170638.10	ENST00000463233.1	2404	9	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	131.291660055009	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTTTTGTGACGTGTG	50179483	True	NA	16	True	AATAAA	-16	NA	50185917	50199595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_50186002_50193026_50193094_50193575_50193655_50194339_50194507_50194899_50195041_50197240_50197352_50197448_50197589_50197822_50198187_50198344
transcript_140015.nic	chr22	+	2407	9	NIC	ENSG00000170638.10	novel	2305	10	NA	NA	-23	0	intron_retention	TRUE	canonical	3	279	junction_1	74.5166717922909	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTTTTGTGACGTGTG	50179455	True	NA	16	True	AATAAA	-16	NA	50185889	50199595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_50185977_50193026_50193094_50193575_50193655_50194339_50194507_50194899_50195041_50197240_50197352_50197448_50197589_50197822_50198187_50198344
transcript_14004.known	chr1	+	2079	6	FSM	ENSG00000160679.13	ENST00000368694.8	2079	6	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_3	175.693369254505	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGACTCTCTTTATTTG	153620321	True	NA	17	True	NA	NA	NA	153634065	153646306	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_153634344_153636571_153636654_153638294_153638449_153642245_153642430_153643226_153643365_153645063
transcript_140056.known	chr22	-	1001	2	FSM	ENSG00000273253.2	ENST00000608025.2	1001	2	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATTTTAAGACATTAAAAAA	-50200609	True	NA	NA	False	ATTAAA	-16	NA	50200837	50199089	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50199329_50200075
transcript_140057.known	chr22	+	2283	9	FSM	ENSG00000073169.15	ENST00000380903.7	2283	9	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_2	30.2528407757024	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCTCTGTGGTCATTG	50198838	True	NA	9	True	AATAAA	-17	NA	50201010	50217616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_50201591_50206316_50206521_50208535_50208717_50210180_50210312_50210630_50210912_50215716_50215868_50216690_50216877_50216971_50217129_50217204
transcript_140066.known	chr22	-	2567	20	FSM	ENSG00000100429.18	ENST00000216271.10	2567	20	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_19	19.528798253319	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGCTCTGCCTCCTTTA	-50249019	True	NA	0	True	AGTAAA	-17	NA	50251265	50245182	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50245531_50245674_50245828_50245909_50246093_50246297_50246377_50246678_50246736_50246874_50246967_50247691_50247777_50247889_50248146_50248224_50248293_50248365_50248473_50248661_50248752_50248830_50248891_50249102_50249169_50249327_50249455_50249634_50249704_50249859_50249965_50250062_50250161_50250426_50250524_50250770_50250906_50250973
transcript_140067.nic	chr22	-	2595	20	NIC	ENSG00000100429.18	novel	2567	20	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_19	19.7019340417673	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGCTCTGCCTCCTTTA	-50251391	False	NA	0	True	AGTAAA	-17	NA	50251421	50245182	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_50245531_50245674_50245828_50245909_50246093_50246297_50246377_50246678_50246736_50246874_50246967_50247691_50247777_50247889_50248146_50248224_50248293_50248365_50248473_50248661_50248752_50248830_50248891_50249102_50249169_50249327_50249455_50249634_50249704_50249859_50249965_50250062_50250161_50250426_50250524_50250770_50250906_50251101
transcript_140070.nnic	chr22	-	2462	20	NNC	ENSG00000100429.18	novel	2567	20	NA	NA	42	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_10	24.1538237597294	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGCTCTGCCTCCTTTA	-50249078	True	NA	0	True	AGTAAA	-17	NA	50251324	50245182	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_50245531_50245674_50245828_50245909_50246093_50246297_50246377_50246678_50246736_50246874_50246967_50247691_50247777_50247889_50248146_50248224_50248293_50248365_50248473_50248697_50248752_50248830_50248891_50249102_50249169_50249327_50249455_50249634_50249704_50249859_50249965_50250062_50250161_50250426_50250524_50250770_50250906_50251101
transcript_140073.known	chr22	-	2153	19	FSM	ENSG00000100429.18	ENST00000498366.5	2153	19	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_12	27.9309112359253	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCGGACCCCAAGCCCAC	-50249120	True	NA	NA	False	NA	NA	NA	50251366	50245441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50245531_50245674_50245828_50245909_50246093_50246297_50246377_50246678_50246736_50246874_50246967_50247691_50247777_50247889_50248146_50248224_50248293_50248365_50248473_50248661_50248752_50248830_50248860_50249102_50249169_50249327_50249455_50249634_50249704_50249859_50249965_50250062_50250161_50250770_50250906_50251101
transcript_140078.known	chr22	-	1950	19	FSM	ENSG00000100429.18	ENST00000349505.4	1950	19	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_11	24.3389770218293	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCGGCCAAGGTGGGAGCA	-50251018	False	NA	NA	False	NA	NA	NA	50251032	50245506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50245531_50245674_50245828_50245909_50246093_50246297_50246377_50246678_50246736_50246874_50246967_50247691_50247777_50247889_50248146_50248224_50248293_50248365_50248473_50248661_50248752_50249102_50249169_50249327_50249455_50249634_50249704_50249859_50249965_50250062_50250161_50250426_50250524_50250770_50250906_50250973
transcript_14010.known	chr1	+	1923	5	FSM	ENSG00000160679.13	ENST00000403433.5	1923	5	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_4	315.642598519275	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACCCAGGACTCTCTTTA	153620335	True	NA	13	True	NA	NA	NA	153634079	153646302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_153634344_153636571_153636654_153638294_153638449_153642245_153642430_153645063
transcript_140123.nnic	chr22	-	1683	13	NNC	ENSG00000188130.14	novel	1778	12	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	69.7285908999235	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTGGCTGTGCGTCCTC	-50260707	True	NA	-4	True	AATAGA	-17	NA	50261739	50252902	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_50253481_50255196_50255371_50255452_50255532_50255614_50255695_50255809_50255882_50256084_50256200_50256598_50256647_50256934_50256965_50257081_50257194_50258242_50258302_50261166_50261297_50261384_50261484_50261632
transcript_140131.known	chr22	-	1785	12	FSM	ENSG00000188130.14	ENST00000488504.5	1785	12	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_7	62.9217013109767	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTGGCTGTGCGTCCTC	-50261497	False	NA	-4	True	AATAGA	-17	NA	50261545	50252902	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50253481_50255196_50255371_50255452_50255532_50255614_50255695_50255809_50255882_50256084_50256200_50256598_50256647_50256787_50256965_50257081_50257194_50258242_50258302_50261166_50261297_50261384
transcript_140135.known	chr22	-	1778	12	FSM	ENSG00000188130.14	ENST00000215659.13	1778	12	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_7	29.3994996303066	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGCTGTGCGTCCTCAT	-50260651	True	NA	-2	True	AATAGA	-19	NA	50261683	50252900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50253481_50255196_50255371_50255452_50255532_50255614_50255695_50255809_50255882_50256084_50256200_50256598_50256647_50256934_50256965_50257081_50257194_50258242_50258302_50261166_50261297_50261384
transcript_140136.nnic	chr22	-	1780	12	NNC	ENSG00000188130.14	novel	1778	12	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_11	67.5860027564513	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTGGCTGTGCGTCCTC	-50260714	True	NA	-4	True	AATAGA	-17	NA	50261746	50252902	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr22_-_50253481_50255196_50255371_50255452_50255532_50255614_50255695_50255809_50255882_50256084_50256200_50256598_50256647_50256934_50256965_50257081_50257194_50258242_50258302_50261166_50261297_50261443
transcript_140149.known	chr22	-	1779	11	FSM	ENSG00000188130.14	ENST00000622558.4	1779	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	71.7822401433669	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTGGCTGTGCGTCCTC	-50260684	True	NA	-4	True	AATAGA	-17	NA	50261716	50252902	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50253481_50255196_50255371_50255452_50255532_50255614_50255695_50255809_50255882_50256084_50256200_50256598_50256647_50257081_50257194_50258242_50258302_50261166_50261297_50261384
transcript_140155.nic	chr22	-	2799	11	ISM	ENSG00000188130.14	ENST00000488504.5	1785	12	-176	878	-5	0	5prime_fragment	FALSE	canonical	3	27	junction_6	65.7027396689057	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGGGCCATAGGATCCT	-50260689	True	NA	-4	True	ATTAAA	-31	NA	50261721	50253780	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_-_50255371_50255452_50255532_50255614_50255695_50255809_50255882_50256084_50256200_50256598_50256647_50256787_50256965_50257081_50257194_50258242_50258302_50261166_50261297_50261384
transcript_140168.known	chr22	-	2019	11	FSM	ENSG00000188130.14	ENST00000467891.5	2019	11	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_7	65.9476307383366	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTTTTGTAGCTCCCTGT	-50260676	True	NA	-21	True	NA	NA	NA	50261708	50252919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50253481_50255196_50255371_50255452_50255532_50255614_50255695_50255809_50255882_50256084_50256200_50256598_50256647_50256787_50256965_50257081_50257194_50258242_50258302_50261166
transcript_140169.known	chr22	-	2418	12	FSM	ENSG00000185386.15	ENST00000330651.11	2418	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.655554777357089	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCTTGTATCCAAAGGC	-50270332	True	NA	1	True	AATAAA	-16	NA	50270380	50263712	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50265028_50265320_50265495_50265581_50265661_50266225_50266306_50266539_50266612_50266933_50267049_50267126_50267175_50267256_50267287_50267370_50267483_50267568_50267628_50267819_50267950_50270176
transcript_140175.nic	chr22	-	3280	7	NIC	ENSG00000185386.15	novel	2418	12	NA	NA	2678	0	intron_retention	FALSE	canonical	0	0	junction_3	0.577350269189626	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCTTGTATCCAAAGGC	-50267649	True	NA	1	True	AATAAA	-16	NA	50267702	50263712	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_50265028_50265320_50265495_50265581_50267049_50267126_50267175_50267256_50267287_50267370_50267483_50267568
transcript_140177.known	chr22	-	1512	13	FSM	ENSG00000185386.15	ENST00000395764.5	1512	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.645497224367903	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTGGCTTGTATCCAAAG	-50270345	True	NA	-1	True	AATAAA	-14	NA	50270393	50263714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50263878_50264794_50265028_50265320_50265495_50265581_50265661_50266225_50266306_50266539_50266612_50266933_50267049_50267126_50267175_50267256_50267287_50267370_50267483_50267568_50267628_50267819_50267950_50270176
transcript_140185.known	chr22	+	4094	24	FSM	ENSG00000100239.16	ENST00000612753.5	4094	24	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_4	21.8123982710862	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCGTACTGTGAACCTTCC	50337076	True	NA	20	True	AATAAA	-21	NA	50343326	50445090	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_50343551_50372019_50372151_50393892_50394136_50406688_50406876_50414551_50414690_50416091_50416158_50418866_50418980_50419348_50419463_50422253_50422381_50423461_50423615_50431172_50431383_50432264_50432330_50434965_50435082_50436366_50436453_50436987_50437069_50437505_50437604_50437842_50437901_50438173_50438299_50438598_50438763_50439700_50439858_50439960_50440050_50440821_50441027_50443865_50444118_50444198
transcript_140190.known	chr22	+	3293	23	FSM	ENSG00000100239.16	ENST00000395744.7	3293	23	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_14	32.2108241136834	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGCAGTTGAAACCAGTT	50337080	True	NA	21	True	AATAAA	-16	NA	50343330	50444374	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_50343551_50372019_50372151_50393892_50394136_50406688_50406876_50414551_50414690_50416091_50416158_50418866_50418980_50419348_50419463_50422253_50422381_50423461_50423615_50431172_50431383_50432264_50432330_50434965_50435082_50436366_50436453_50437505_50437604_50437842_50437901_50438173_50438299_50438598_50438763_50439700_50439858_50439960_50440050_50440821_50441027_50443865_50444118_50444198
transcript_140202.known	chr22	+	4035	23	FSM	ENSG00000100239.16	ENST00000359139.7	4035	23	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_22	50.1954238801945	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCGTACTGTGAACCTTCC	50337053	True	NA	20	True	AATAAA	-21	NA	50343303	50445090	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_50343551_50372019_50372151_50393892_50394136_50406688_50406876_50414551_50414690_50416091_50416158_50418866_50418980_50419348_50419463_50422253_50422381_50423461_50423615_50431172_50431383_50432264_50432330_50434965_50435082_50436366_50436453_50437505_50437604_50437842_50437901_50438173_50438299_50438598_50438763_50439697_50439858_50439960_50440050_50440821_50441027_50443865_50444118_50444202
transcript_140203.known	chr22	-	8019	41	FSM	ENSG00000100241.22	ENST00000380817.8	8019	41	0	0	0	0	multi-exon	TRUE	canonical	3	273	junction_22	48.1302334816693	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTTCTGGACCCTTCTA	-50472068	True	NA	NA	False	ATTAAA	-19	NA	50475035	50444999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50447241_50447321_50447454_50447521_50447610_50448232_50448445_50448542_50448651_50454511_50454743_50454813_50454945_50455015_50455143_50455223_50455410_50455480_50455583_50456215_50456396_50456491_50456674_50457033_50457112_50459254_50459393_50459469_50459667_50459951_50460160_50460271_50460409_50460533_50460713_50461158_50461287_50461522_50461719_50461795_50461870_50461946_50462120_50462204_50462474_50462558_50462718_50462869_50462939_50463282_50463433_50464328_50464442_50464533_50464739_50464818_50464918_50465000_50465130_50465214_50465329_50465762_50465841_50465960_50466075_50466149_50466259_50466349_50466483_50466604_50466711_50467337_50467449_50467531_50467691_50467785_50467924_50468375_50468462_50474785
transcript_140204.nic	chr22	-	6227	41	FSM	ENSG00000100241.22	ENST00000684986.1	6200	41	-21	-6	-5	0	multi-exon	FALSE	canonical	3	87	junction_38	62.7466333758234	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCCTGTGCCTGCCTTCC	-50472079	True	NA	-15	True	TATAAA	-17	NA	50475046	50446805	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50447241_50447321_50447454_50447521_50447610_50448232_50448445_50448542_50448651_50454511_50454743_50454813_50454945_50455015_50455143_50455223_50455410_50455480_50455583_50456215_50456396_50456491_50456674_50457033_50457112_50459254_50459393_50459469_50459667_50459951_50460160_50460271_50460409_50460533_50460713_50461158_50461287_50461522_50461719_50461795_50461870_50461946_50462120_50462204_50462474_50462558_50462718_50462869_50462939_50463282_50463433_50464328_50464442_50464533_50464739_50464818_50464918_50465000_50465130_50465214_50465329_50465762_50465841_50465960_50466075_50466149_50466259_50466349_50466483_50466604_50466711_50467337_50467449_50467531_50467694_50467785_50467924_50468375_50468462_50474785
transcript_140212.known	chr22	+	4276	2	FSM	ENSG00000128165.9	ENST00000395738.2	4276	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTCAGAATCATCTTTTC	50481095	True	NA	NA	False	AATAAA	-23	NA	50481555	50486440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_50481958_50482566
transcript_140216.known	chr22	-	2593	14	FSM	ENSG00000100258.18	ENST00000474879.7	2593	14	0	0	0	0	multi-exon	FALSE	canonical	2	129	junction_12	33.1885415458533	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCCTGGTGCTGCTTT	-50505023	True	NA	-4	True	AATAAA	-20	NA	50507702	50502948	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50503700_50503807_50503905_50504339_50504452_50504558_50504728_50504801_50504985_50505056_50505154_50505228_50505335_50505402_50505538_50505673_50505816_50506034_50506214_50506284_50506503_50506637_50506667_50506781_50507036_50507581
transcript_14022.known	chr1	+	1840	4	FSM	ENSG00000160679.13	ENST00000614256.4	1840	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	378.352862932064	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGGACTCTCTTTATTT	153633923	False	NA	16	True	NA	NA	NA	153633981	153646305	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_153634344_153636571_153636654_153638294_153638449_153645063
transcript_140227.known	chr22	-	2658	14	FSM	ENSG00000100258.18	ENST00000216080.5	2658	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_13	64.5826840331298	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGCCTGGTGCTGCT	-50505005	True	NA	-6	True	AATAAA	-18	NA	50507684	50502950	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50503700_50503807_50503905_50504339_50504452_50504558_50504728_50504801_50504985_50505056_50505154_50505228_50505335_50505402_50505538_50505673_50505816_50506034_50506214_50506284_50506503_50506637_50506667_50506781_50507121_50507581
transcript_140230.known	chr22	+	1996	20	FSM	ENSG00000025770.19	ENST00000299821.15	1996	20	0	0	0	0	multi-exon	FALSE	canonical	2	31	junction_15	58.3235791871236	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCCCCCTAAAAACCCTT	50507492	True	NA	18	True	AATAAA	-18	NA	50508259	50523472	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_50508446_50516446_50516549_50517426_50517483_50517576_50517662_50517740_50517810_50517972_50518053_50518132_50518279_50518648_50518733_50519189_50519321_50520964_50521037_50521542_50521610_50521740_50521849_50521985_50522040_50522180_50522252_50522342_50522416_50522497_50522570_50522670_50522721_50522820_50522923_50523016_50523167_50523234
transcript_140236.known	chr22	+	2077	19	FSM	ENSG00000025770.19	ENST00000395701.7	2077	19	0	0	0	0	multi-exon	FALSE	canonical	2	184	junction_14	26.0104442460436	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCCCCCTAAAAACCCTT	50507476	True	NA	18	True	AATAAA	-18	NA	50508243	50523472	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_50508446_50516446_50516549_50517426_50517483_50517576_50517662_50517740_50517810_50517972_50518053_50518132_50518279_50518648_50518733_50519189_50519321_50520964_50521037_50521542_50521610_50521740_50521849_50521985_50522040_50522180_50522252_50522342_50522416_50522500_50522570_50522670_50522721_50522820_50522923_50523016
transcript_140238.nic	chr22	+	2129	19	NIC	ENSG00000025770.19	novel	3337	20	NA	NA	0	0	intron_retention	TRUE	canonical	2	184	junction_14	25.3299827218922	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCCCCCTAAAAACCCTT	50507456	True	NA	18	True	AATAAA	-18	NA	50508223	50523472	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_+_50508446_50516446_50516549_50517426_50517483_50517576_50517662_50517740_50517810_50517972_50518053_50518132_50518279_50518648_50518733_50519189_50519321_50520964_50521037_50521542_50521610_50521740_50521849_50521985_50522040_50522180_50522252_50522342_50522416_50522500_50522570_50522670_50522923_50523016_50523167_50523234
transcript_140261.known	chr22	-	1614	10	FSM	ENSG00000025708.14	ENST00000395678.7	1614	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	9.59295008628861	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACCTTGTCAGTGCTTGG	NA	False	NA	-4	True	AATAAA	-14	NA	50530032	50525755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50525919_50526000_50526142_50526245_50526477_50526575_50526739_50527164_50527284_50527587_50527718_50528511_50528611_50529135_50529339_50529495_50529732_50529903
transcript_140262.known	chr22	+	1388	9	FSM	ENSG00000025770.19	ENST00000395698.7	1388	9	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_1	11.9419167222017	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCATACAGAGGAAATGTTA	50507475	True	NA	4	True	ATTAAA	-16	NA	50508242	50519752	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_50508446_50516446_50516549_50517426_50517483_50517576_50517662_50517740_50517810_50517972_50518053_50518132_50518279_50518648_50518733_50519189
transcript_140267.known	chr22	-	984	2	FSM	ENSG00000284194.3	ENST00000395693.8	984	2	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	0	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGTGTGATCT	-50524282	True	NA	-4	True	ATTAAA	-15	NA	50525598	50523567	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50524425_50525471
transcript_140268.known	chr22	-	664	2	FSM	ENSG00000284194.3	ENST00000638598.2	664	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGCGGGACGACGTTGAAG	-50526125	False	91	NA	False	NA	NA	NA	50526145	50523905	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50524425_50526000
transcript_140269.known	chr22	-	1068	2	FSM	ENSG00000284194.3	ENST00000543927.6	1068	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAATCTGTGTGTGTGTGT	-50526370	True	NA	-9	True	ATTAAA	-10	NA	50526461	50523572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50524425_50526245
transcript_140270.known	chr22	-	992	2	FSM	ENSG00000284194.3	ENST00000252785.3	992	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCCATCATTAAACGGGCT	-50524288	True	NA	-32	True	NA	NA	NA	50525604	50523595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50524425_50525441
transcript_140271.known	chr22	-	462	3	FSM	ENSG00000217442.4	ENST00000406915.4	462	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGAGGACCTCTTCTCTC	-50562805	True	NA	-2	True	AATAAA	-17	NA	50562919	50551111	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50551403_50556296_50556406_50562857
transcript_140292.known	chr22	-	2603	20	FSM	ENSG00000205560.13	ENST00000312108.12	2603	20	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_19	39.5791573342695	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTCCCTGGGGCCATTT	-50578310	False	21	-6	True	AATAAA	-21	NA	50578427	50568860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50569082_50569335_50569422_50569575_50569669_50570292_50570407_50570890_50571044_50571157_50571293_50571374_50571540_50572005_50572123_50572202_50572309_50572874_50573061_50573519_50573716_50574334_50574420_50574492_50574601_50576034_50576113_50576197_50576336_50576535_50576638_50576856_50577035_50577323_50577464_50577774_50577935_50578385
transcript_140293.known	chr22	-	2662	19	FSM	ENSG00000205560.13	ENST00000395650.6	2662	19	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_18	40.6399806187375	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTTAGGTACCTGTGTT	-50578338	False	21	NA	False	AATAAA	-25	NA	50578455	50569083	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50569422_50569575_50569669_50570292_50570407_50570890_50571044_50571157_50571293_50571374_50571540_50572005_50572123_50572202_50572309_50572874_50573061_50573519_50573716_50574334_50574420_50574492_50574601_50576034_50576113_50576197_50576336_50576535_50576638_50576856_50577035_50577323_50577464_50577774_50577935_50578385
transcript_140295.nic	chr22	-	1444	11	NIC	ENSG00000100288.20	novel	1474	11	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_3	139.331834122716	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCCTGTCCTGGCCCTGC	-50580443	True	NA	26	True	AATAAA	-15	NA	50582850	50578965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_50579256_50579425_50579508_50579726_50579803_50579973_50580083_50580189_50580272_50580357_50580417_50580564_50580661_50581419_50581554_50581748_50581863_50582248_50582358_50582557
transcript_140297.known	chr22	-	1474	11	FSM	ENSG00000100288.20	ENST00000406938.3	1474	11	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_10	105.324071322751	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCCTGGCCCTGCTGA	-50580442	True	NA	29	True	AATAAA	-18	NA	50582849	50578962	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50579256_50579425_50579508_50579726_50579831_50579973_50580083_50580189_50580272_50580357_50580417_50580564_50580661_50581419_50581554_50581748_50581863_50582248_50582358_50582557
transcript_14030.known	chr1	+	559	3	FSM	ENSG00000160678.12	ENST00000292169.6	559	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGATGTCTGTCTCCTCTG	153628375	True	NA	7	True	ATTAAA	-21	NA	153628433	153632039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_153628497_153630508_153630663_153631697
transcript_140300.known	chr22	-	1856	10	FSM	ENSG00000100288.20	ENST00000481673.5	1856	10	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_9	97.0987787745354	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCCTGGCCCTGCTGA	-50580438	True	NA	29	True	AATAAA	-18	NA	50582845	50578962	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50579256_50579425_50579508_50579726_50579831_50579973_50580083_50580189_50580272_50580357_50580417_50580564_50580661_50581419_50581554_50581748_50582358_50582557
transcript_140309.known	chr22	-	1401	8	FSM	ENSG00000100288.20	ENST00000484266.5	1401	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_7	149.368603099302	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCCTGGCCCTGCTGA	-50580417	True	NA	29	True	AATAAA	-18	NA	50582824	50578962	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50579256_50579425_50579508_50579726_50579831_50579973_50580083_50580189_50580272_50580357_50580417_50580564_50580661_50582248
transcript_14031.known	chr1	+	2553	3	FSM	ENSG00000160679.13	ENST00000495554.1	2553	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	437.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGTTTTTTGTTTTTGT	153620330	True	NA	-95	True	NA	NA	NA	153634074	153645470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_153634344_153636571_153638449_153645063
transcript_14032.known	chr1	-	579	3	FSM	ENSG00000189171.15	ENST00000392623.5	579	3	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_2	191.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATGTTTCTTACTTACA	-153626807	False	NA	-24	True	AATAAA	-17	NA	153627268	153618803	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153619039_153626319_153626534_153627138
transcript_140320.known	chr22	+	940	2	FSM	ENSG00000205559.5	ENST00000656328.1	940	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCAGACTCAGTCTCAAAA	50582516	True	NA	NA	False	NA	NA	NA	50583119	50584333	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_50583324_50583597
transcript_140322.known	chr22	+	807	2	FSM	ENSG00000205559.5	ENST00000666183.1	807	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGAAACCCCGTCGCTACT	50582575	True	NA	NA	False	NA	NA	NA	50583178	50584182	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_50583401_50583597
transcript_140324.known	chr22	-	2069	9	FSM	ENSG00000100288.20	ENST00000492582.5	2069	9	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_8	73.1880070435041	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGGCCCTGCTGAGCAG	-50580447	True	NA	33	True	AATAAA	-22	NA	50582854	50578958	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50579256_50579425_50579508_50579726_50579831_50579973_50580083_50580189_50580272_50580357_50580417_50580564_50580661_50581419_50581554_50581748
transcript_140325.known	chr22	-	2114	8	FSM	ENSG00000100288.20	ENST00000479003.5	2114	8	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_7	78.2408630643938	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCCTGTCCTGGCCCTGC	-50580413	True	NA	26	True	AATAAA	-15	NA	50582820	50578965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50579256_50579425_50579508_50579726_50579831_50579973_50580083_50580189_50580417_50580564_50580661_50581419_50581554_50581748
transcript_14033.known	chr1	-	477	3	FSM	ENSG00000189171.15	ENST00000476133.6	477	3	0	0	0	0	multi-exon	TRUE	canonical	3	268	junction_2	67	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTTACTTACACCCCA	-153619330	True	NA	-19	True	AATAAA	-22	NA	153627505	153618798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153619039_153626319_153626534_153627482
transcript_140330.nic	chr22	-	2339	10	NIC	ENSG00000079974.19	novel	2536	11	NA	NA	0	0	intron_retention	FALSE	canonical	2	8	junction_8	73.0494505264908	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTAAATGTATGTGC	-50780324	True	NA	-30	True	AGTAAA	-17	NA	50783667	50767505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_50768875_50769040_50769125_50769454_50769553_50769904_50770017_50775771_50775852_50776669_50776750_50777951_50777982_50782187_50782352_50782890_50783046_50783500
transcript_140331.nnic	chr22	-	2527	10	NIC	ENSG00000079974.19	novel	2401	10	NA	NA	7	0	intron_retention	FALSE	canonical	3	13	junction_9	61.1829880333689	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTAAATGTATGTGC	-50780309	True	NA	-30	True	AGTAAA	-17	NA	50783652	50767505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_50768875_50769040_50769125_50769454_50769553_50769904_50770017_50775771_50775852_50776669_50776750_50777951_50777982_50782187_50782352_50783038_50783287_50783390
transcript_140332.known	chr22	-	2401	10	FSM	ENSG00000079974.19	ENST00000395595.8	2401	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_9	58.0880557621119	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTAAATGTATGTGC	-50780293	True	NA	-30	True	AGTAAA	-17	NA	50783636	50767505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50768875_50769040_50769125_50769454_50769553_50769904_50770017_50775771_50775852_50776669_50776750_50777951_50777982_50782187_50782352_50783038_50783287_50783500
transcript_140333.nic	chr22	-	2218	9	NIC	ENSG00000079974.19	novel	2149	9	NA	NA	-8	0	intron_retention	FALSE	canonical	2	11	junction_2	63.2416002327582	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTAAATGTATGTGC	-50780332	True	NA	-30	True	AGTAAA	-17	NA	50783675	50767505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr22_-_50768875_50769040_50769125_50769424_50769553_50769904_50770017_50775771_50775852_50776669_50776750_50777951_50777982_50782187_50782348_50783500
transcript_140336.known	chr22	-	2169	9	FSM	ENSG00000079974.19	ENST00000395598.7	2169	9	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	55.9540827375447	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTAAATGTATGTGC	-50780316	True	NA	-30	True	AGTAAA	-17	NA	50783659	50767505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50768875_50769040_50769125_50769454_50769550_50769904_50770017_50775771_50775852_50776669_50776750_50777951_50777982_50782187_50782348_50783500
transcript_140337.nic	chr22	-	2650	9	ISM	ENSG00000079974.19	ENST00000395595.8	2401	10	-35	0	-4	0	intron_retention	FALSE	canonical	3	71	junction_8	41.266663301023	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTAAATGTATGTGC	-50780328	True	NA	-30	True	AGTAAA	-17	NA	50783671	50767505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr22_-_50768875_50769040_50769125_50769454_50769553_50769904_50770017_50775771_50775852_50776669_50776750_50777951_50777982_50782187_50782352_50783038
transcript_140346.known	chr22	-	831	6	FSM	ENSG00000079974.19	ENST00000464678.5	831	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	65.7559122817105	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTTGGTTGGTTGCTTGC	-50779943	False	NA	NA	False	NA	NA	NA	50783286	50769781	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50770017_50775771_50775852_50776669_50776750_50777951_50777982_50782187_50782352_50783044
transcript_140349.known	chr22	+	658	4	FSM	ENSG00000184319.17	ENST00000423888.6	732	4	2	72	2	-7	multi-exon	FALSE	canonical	2	4	junction_3	44.3946943776944	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTATTTGGAATCCATG	50780578	True	NA	NA	False	ATTAAA	-14	NA	50783811	50789172	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_50784022_50785172_50785294_50788749_50788799_50788894
transcript_140353.known	chr22	+	1080	3	FSM	ENSG00000184319.17	ENST00000651346.2	1284	3	105	99	-25	7	multi-exon	FALSE	canonical	3	109	junction_1	81	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTGGTGAATATTTATT	50780616	True	NA	NA	False	AAGAAA	-27	NA	50783849	50799441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_50784022_50785172_50785294_50798654
transcript_140358.known	chr22	+	1009	3	FSM	ENSG00000184319.17	ENST00000462238.6	1131	3	17	105	2	0	multi-exon	FALSE	canonical	3	178	junction_1	46.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTAGGAGTTTGGTGAAT	50780523	True	NA	NA	False	AAGAAA	-20	NA	50783756	50799434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_50783865_50785172_50785294_50798654
transcript_14036.known	chr1	-	1906	14	FSM	ENSG00000143621.17	ENST00000615950.4	1906	14	0	0	0	0	multi-exon	FALSE	canonical	1	19	junction_11	1032.19009418447	1541	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTATTCAAGCCAGTG	-153616608	True	NA	0	True	AATAAA	-19	NA	153671028	153661787	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153662557_153662704_153662796_153663018_153663134_153663214_153663277_153664042_153664131_153664395_153664475_153665219_153665337_153665662_153665729_153667554_153667658_153667999_153668078_153668452_153668577_153669835_153669879_153670170_153670231_153670917
transcript_140364.known	chr22	+	2987	3	FSM	ENSG00000184319.17	ENST00000480246.2	3083	3	96	0	-13	0	multi-exon	FALSE	canonical	3	25	junction_1	123	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTCAGACTCAGGTATTT	50780628	False	NA	NA	False	ATTAAA	-20	NA	50783861	50801309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_+_50784073_50785172_50785294_50798654
transcript_140367.known	chr22	-	2341	10	FSM	ENSG00000079974.19	ENST00000395593.7	2341	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_8	84.0052908386662	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTAAATGTATGTGC	-50780299	True	NA	-30	True	AGTAAA	-17	NA	50783642	50767505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50768875_50769040_50769125_50769424_50769550_50769904_50770017_50775771_50775852_50776669_50776750_50777951_50777982_50782187_50782352_50782890_50783046_50783500
transcript_140368.known	chr22	-	2049	8	FSM	ENSG00000079974.19	ENST00000436958.5	2049	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	86.3545137257823	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGTAAAGGCTGAATTACA	-50780295	True	NA	-54	True	NA	NA	NA	50783638	50767529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr22_-_50768875_50769040_50769125_50769424_50769553_50775771_50775852_50776669_50776750_50777951_50777982_50782187_50782352_50783500
transcript_140370.known	chr3	-	2203	11	FSM	ENSG00000113851.16	ENST00000432408.6	2203	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_10	89.8047326147125	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTCTTTGTTCAAATAA	-3175671	True	NA	NA	False	AGTAAA	-20	NA	3179710	3150010	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_3151046_3152455_3152588_3153423_3153489_3153959_3154076_3154746_3154832_3156218_3156282_3167633_3167794_3172775_3172926_3174058_3174262_3175162_3175267_3179620
transcript_140380.known	chr3	-	2038	10	FSM	ENSG00000113851.16	ENST00000424814.5	2038	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	100.576118216779	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTCTTTGTTCAAATAA	-3175635	True	NA	NA	False	AGTAAA	-20	NA	3179674	3150010	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_3151046_3153423_3153489_3153959_3154076_3154746_3154832_3156218_3156282_3167633_3167794_3172775_3172926_3174058_3174262_3175162_3175270_3179620
transcript_140389.known	chr3	-	2223	12	FSM	ENSG00000113851.16	ENST00000639284.1	2223	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	92.4915899683643	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTTCATAACCATTAAAGT	NA	False	NA	NA	False	NA	NA	NA	3179727	3144627	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_3145500_3150882_3151046_3152455_3152588_3153423_3153489_3153959_3154076_3154746_3154832_3156218_3156282_3167633_3167794_3172775_3172926_3174058_3174262_3175162_3175270_3179620
transcript_140390.known	chr3	+	2252	8	FSM	ENSG00000072756.17	ENST00000251607.11	2252	8	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	32.8757711168972	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTATTTCAGCTGCTAT	3123320	True	NA	68	True	AATAAA	-15	NA	3126939	3149023	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_3126991_3129013_3129189_3137259_3137454_3140509_3140649_3144583_3144711_3146429_3146624_3147449_3147704_3147905
transcript_140399.known	chr3	+	1113	7	FSM	ENSG00000072756.17	ENST00000651093.1	1113	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	71.6645348520142	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGGTTACCAAATGGAAAAA	3123343	True	NA	NA	False	AAGAAA	-43	NA	3126962	3148101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_3126991_3129013_3129189_3137259_3137454_3140509_3140649_3144583_3144711_3147449_3147704_3147905
transcript_140408.known	chr3	-	878	5	FSM	ENSG00000113851.16	ENST00000450014.1	878	5	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_1	39.054449170357	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGGTATCCTTGTTATT	-3175635	True	NA	NA	False	AATAAA	-13	NA	3179674	3167429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_3167794_3172775_3172926_3174058_3174262_3175162_3175270_3179620
transcript_140409.known	chr3	-	1012	5	FSM	ENSG00000113851.16	ENST00000498700.5	1012	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	131.763756397577	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCTTGTGACATTTAGA	-3175662	True	NA	2	True	AATAAA	-25	NA	3179701	3172175	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_3172647_3172775_3172926_3174058_3174262_3175162_3175270_3179620
transcript_140414.known	chr3	+	987	3	FSM	ENSG00000072756.17	ENST00000339437.11	987	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	52	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGTTCATCTAATTTA	3123320	True	NA	2	True	AATAAA	-13	NA	3126939	3130679	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_3126991_3129013_3129189_3129918
transcript_140417.known	chr3	+	1935	3	FSM	ENSG00000072756.17	ENST00000402675.5	1935	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	5.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGTTCATCTAATTTA	3123400	True	NA	2	True	AATAAA	-13	NA	3127019	3130679	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_3128019_3129013_3129189_3129918
transcript_140421.known	chr3	-	2147	9	FSM	ENSG00000144455.14	ENST00000272902.10	2147	9	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_4	12.8251461979971	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCACCGTCATCAGCTTCT	-4464923	True	NA	-10	True	AATAAA	-19	NA	4467269	4361145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_4362255_4376329_4376390_4410864_4410979_4417127_4417243_4418009_4418133_4420063_4420147_4449265_4449341_4452875_4453050_4466975
transcript_140422.known	chr3	-	1447	8	FSM	ENSG00000144455.14	ENST00000383843.9	1447	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	41.7353175942615	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGATGGACAGCATGACCTC	-4464918	True	NA	NA	False	AATGAA	-1	NA	4467264	4361765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_4362255_4376329_4376390_4410864_4410979_4417127_4417243_4418009_4418133_4420063_4420147_4452875_4453050_4466975
transcript_140424.known	chr3	-	1128	8	FSM	ENSG00000144455.14	ENST00000405420.2	1128	8	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	42.3715345341128	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTGTCTGACCTACATTGG	-4464927	True	NA	NA	False	NA	NA	NA	4467273	4362108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_4362255_4410864_4410979_4417127_4417243_4418009_4418133_4420063_4420147_4449265_4449341_4452875_4453050_4466975
transcript_140425.known	chr3	-	1102	5	FSM	ENSG00000144455.14	ENST00000458465.6	1102	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	54.8999089252432	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCAAGTGCCCTCCCCTA	-4464923	True	NA	NA	False	NA	NA	NA	4467269	4361794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_4362255_4376329_4376390_4410864_4410979_4452875_4453050_4466975
transcript_140427.nic	chr3	+	4078	3	NIC	ENSG00000175928.6	novel	571	3	NA	NA	-53	-2217	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	72	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACACTTGCAATAATGTAT	3799361	False	NA	14	True	AATAAA	-23	NA	3799377	3847617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_3799920_3800964_3801247_3844363
transcript_140429.nnic	chr3	+	3483	3	NNC	ENSG00000175928.6	novel	571	3	NA	NA	-35	2538	at_least_one_novel_splicesite	FALSE	canonical	3	104	junction_1	41.5	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGATGGGGTTCCCCTGT	3788485	True	NA	0	True	AATAAA	-11	NA	3799395	3847117	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_3799920_3801041_3801247_3844363
transcript_140430.nnic	chr3	+	3983	3	NNC	ENSG00000175928.6	novel	571	3	NA	NA	-35	-2217	at_least_one_novel_splicesite	FALSE	canonical	3	104	junction_1	41.5	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACACTTGCAATAATGTAT	3788485	True	NA	14	True	AATAAA	-23	NA	3799395	3847617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_3799920_3801041_3801247_3844363
transcript_140436.known	chr3	+	5960	2	FSM	ENSG00000175928.6	ENST00000319331.4	5960	2	0	0	0	0	multi-exon	FALSE	canonical	3	698	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTTTCTATTTATTCAA	3788520	True	NA	14	True	NA	NA	NA	3799430	3849834	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_3799920_3844363
transcript_140439.known	chr3	+	1657	4	FSM	ENSG00000170364.13	ENST00000425863.5	1657	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	18.8738502225228	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATAATGATTTAAAATTC	4302581	True	NA	8	True	AATAAA	-16	NA	4303370	4317265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_4303527_4312897_4313230_4313646_4313762_4316211
transcript_140440.known	chr3	+	1676	4	FSM	ENSG00000170364.13	ENST00000413809.5	1676	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	18.8738502225228	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATAATGATTTAAAATTC	4302542	True	NA	8	True	AATAAA	-16	NA	4303331	4317265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_4303527_4312897_4313230_4313666_4313762_4316211
transcript_140441.known	chr3	+	2443	3	FSM	ENSG00000170364.13	ENST00000358065.5	2076	3	-65	-302	-28	302	multi-exon	FALSE	canonical	3	40	junction_1	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGGCCCAAGAATAATAAC	NA	False	NA	NA	False	AATAAA	-45	NA	4303303	4317567	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_4303527_4312897_4313762_4316211
transcript_140444.known	chr3	+	1359	3	FSM	ENSG00000170364.13	ENST00000425046.1	1359	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	20.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATAATGATTTAAAATTC	4302547	True	NA	8	True	AATAAA	-16	NA	4303336	4317265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_4303527_4313646_4313762_4316211
transcript_140449.known	chr3	+	3152	5	FSM	ENSG00000134107.5	ENST00000256495.4	3152	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	1.08972473588517	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTAGTCAACCTGGCAGG	4979231	True	NA	NA	False	NA	NA	NA	4979436	4985323	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_4979799_4979961_4980032_4980300_4980409_4981391_4981516_4982835
transcript_140450.known	chr3	-	2215	3	FSM	ENSG00000235831.7	ENST00000615178.4	2215	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCATAGTCATTGCTATGG	-4979950	False	NA	NA	False	AATAAA	-16	NA	4979961	4896808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_4898700_4900540_4900698_4979794
transcript_140451.nic	chr3	+	2001	13	NIC	ENSG00000134109.11	novel	6113	12	NA	NA	-160	-3837	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	15.5194770100885	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAATTTGAAGTGAGAAGA	NA	False	NA	2	True	AATAAA	-16	NA	5187485	5216121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_5187685_5188180_5188315_5195208_5195282_5199591_5199696_5201752_5201925_5202965_5203150_5205066_5205242_5207152_5207274_5208092_5208264_5210174_5210249_5211119_5211217_5213318_5213523_5215828
transcript_140455.known	chr3	+	6113	12	FSM	ENSG00000134109.11	ENST00000256497.9	6113	12	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_8	6.42952898548615	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCATCTTGTTTCTTTT	5187574	True	NA	5	True	ATTAAA	-17	NA	5187706	5219958	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_5188315_5195208_5195282_5199591_5199696_5201752_5201925_5202965_5203150_5205066_5205242_5207152_5207274_5208092_5208264_5210174_5210249_5211119_5211217_5213318_5213523_5215828
transcript_140458.known	chr3	+	2933	7	FSM	ENSG00000134108.14	ENST00000256496.8	2933	7	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	17.6414914965323	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAATTGATATTGTGATTT	5117366	True	NA	11	True	AATAAA	-16	NA	5122291	5180911	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_5122589_5170502_5170584_5172149_5172224_5172646_5172741_5174016_5174085_5174343_5174415_5178663
transcript_140464.known	chr3	+	1641	7	FSM	ENSG00000134108.14	ENST00000455168.5	1641	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	79.4096271801404	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCCTGACTTTTTATATC	5117366	True	NA	12	True	ATTAAA	-25	NA	5122291	5179646	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_5122589_5170502_5170557_5172149_5172224_5172646_5172741_5174016_5174085_5174343_5174415_5178663
transcript_140466.known	chr3	+	8284	6	FSM	ENSG00000071282.12	ENST00000157600.8	8284	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	5.98665181883831	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATGTCCAGAGGGTTTT	8500850	True	NA	NA	False	AATAAA	-16	NA	8501822	8574668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_8501981_8532736_8532826_8537184_8537441_8548567_8548904_8565431_8565648_8567439
transcript_140469.known	chr3	-	4387	4	FSM	ENSG00000180914.11	ENST00000316793.8	4387	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.24721912892465	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAGCTTGATGGATGAAT	NA	False	NA	-27	True	AATAAA	-38	NA	8769613	8750380	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_8753225_8767265_8768330_8768495_8768592_8769230
transcript_140473.known	chr3	-	5857	13	FSM	ENSG00000070950.10	ENST00000264926.7	5857	13	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_4	22.2015702647858	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTATGCTAGTAAGTGCCT	-8959925	True	NA	-4	True	AATAAA	-14	NA	8963472	8877074	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_8881460_8890388_8890452_8898893_8899048_8902379_8902521_8912311_8912373_8913643_8913721_8935870_8936056_8939553_8939654_8941466_8941805_8947219_8947291_8948508_8948571_8958919_8959002_8963334
transcript_140479.nic	chr3	-	1236	10	ISM	ENSG00000070950.10	ENST00000264926.7	5857	13	-21	25345	9	-12311	5prime_fragment	FALSE	canonical	3	99	junction_1	25.2547514170265	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGATGAATCTACAGAAAA	-8959946	True	NA	NA	False	AAGAAA	-40	NA	8963493	8902419	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_8902521_8912311_8912373_8913643_8913721_8935870_8936056_8939553_8939654_8941466_8941805_8947219_8947291_8948508_8948571_8958919_8959002_8963334
transcript_140480.nic	chr3	-	1106	9	ISM	ENSG00000070950.10	ENST00000264926.7	5857	13	-21	35266	9	-22232	5prime_fragment	FALSE	canonical	3	112	junction_1	22.785686296445	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATAGATGAAATCCACA	-8959946	True	NA	NA	False	NA	NA	NA	8963493	8912340	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_8912373_8913643_8913721_8935870_8936056_8939553_8939654_8941466_8941805_8947219_8947291_8948508_8948571_8958919_8959002_8963334
transcript_140481.nic	chr3	-	884	7	ISM	ENSG00000070950.10	ENST00000415439.5	1550	12	-62	54720	9	5529	5prime_fragment	FALSE	canonical	3	120	junction_1	22.9231808923243	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTAAAAGAGCATGGATTAT	-8959946	True	NA	NA	False	AAGAAA	-3	NA	8963493	8935983	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_8936056_8939553_8939654_8941466_8941805_8947219_8947291_8948508_8948571_8958919_8959002_8963334
transcript_140482.nic	chr3	-	571	5	ISM	ENSG00000070950.10	ENST00000413832.1	581	6	280	-188	9	-57	3prime_fragment	FALSE	canonical	3	122	junction_1	21.2779228309532	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAATTCAGCCCTCAAAAA	-8959946	True	NA	NA	False	AATAAA	-2	NA	8963493	8941607	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_8941805_8947219_8947291_8948508_8948571_8958919_8959002_8963334
transcript_140483.known	chr3	-	592	4	FSM	ENSG00000070950.10	ENST00000469793.1	592	4	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	8.64098759787715	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTTCCTGCCCAAGCCC	-8959896	True	NA	NA	False	NA	NA	NA	8963443	8946951	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_8947291_8948508_8948571_8958919_8959002_8963334
transcript_140486.known	chr3	-	8923	22	FSM	ENSG00000196220.17	ENST00000383836.8	8923	22	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_1	5.1578265386861	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTCCAGTGGTTTTTGA	-9248795	True	NA	-1	True	AATAAA	-21	NA	9249646	8980590	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_8985933_8990511_8990840_8992905_8993056_8994342_8994524_9010307_9010388_9013307_9013536_9013736_9013843_9015596_9015732_9025260_9025339_9026934_9026996_9032649_9032753_9038062_9038091_9047390_9047476_9053026_9053225_9056232_9056335_9058250_9058473_9060230_9060360_9064395_9064582_9080024_9080088_9104679_9104843_9124724_9124918_9248884
transcript_140493.nic	chr3	-	3571	20	ISM	ENSG00000196220.17	ENST00000383836.8	8923	22	-40	12037	-1	0	5prime_fragment	FALSE	canonical	2	10	junction_8	4.48203554864079	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGGCAAGTATTTTTCC	NA	False	NA	-12	True	TTTAAA	-27	NA	9249686	8992627	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_8993056_8994342_8994524_9010307_9010388_9013307_9013536_9013736_9013843_9015596_9015732_9025260_9025339_9026934_9026996_9032649_9032753_9038062_9038091_9047390_9047476_9053026_9053225_9056232_9056335_9058250_9058473_9060230_9060360_9064395_9064582_9080024_9080088_9104679_9104843_9124724_9124918_9248884
transcript_140525.known	chr3	+	6931	23	FSM	ENSG00000168137.20	ENST00000402198.7	6931	23	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_21	98.2713922203487	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTGTCCAATTTTGTG	9396271	True	NA	24	True	AATAAA	-33	NA	9397614	9478154	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9397978_9424466_9424527_9428822_9429010_9433844_9433951_9434333_9434486_9434823_9434883_9435727_9435907_9440455_9440699_9441592_9441742_9442127_9442246_9443307_9443418_9445047_9445301_9445656_9445741_9447049_9447308_9447685_9448007_9448387_9448631_9453738_9453869_9464424_9464673_9470458_9470930_9473235_9473538_9474448_9474583_9475067_9475157_9475482
transcript_140547.known	chr3	+	3754	10	FSM	ENSG00000134077.16	ENST00000452837.7	3754	10	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	80.2745289615579	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTTAGTTACAGACCAGA	9358007	True	NA	21	True	AATAAA	-21	NA	9363053	9386791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9363128_9365015_9365321_9366907_9366986_9371059_9371537_9374515_9374647_9377818_9377889_9380502_9380619_9383198_9383310_9384211_9384336_9384523
transcript_140552.known	chr3	+	3961	10	FSM	ENSG00000134077.16	ENST00000345094.7	3961	10	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	83.8841058239077	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTTAGTTACAGACCAGA	9358005	True	NA	21	True	AATAAA	-21	NA	9363051	9386791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9363333_9365015_9365321_9366907_9366986_9371059_9371537_9374515_9374647_9377818_9377889_9380502_9380619_9383198_9383310_9384211_9384336_9384523
transcript_140563.nic	chr3	+	3070	10	NIC	ENSG00000134077.16	novel	3961	10	NA	NA	-3	833	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	112.445981544171	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAAGGTGTGTGTTTTCA	9358001	True	NA	12	True	ATTAAA	-23	NA	9363047	9385703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_9363526_9365015_9365321_9366907_9366986_9371059_9371537_9374515_9374647_9377818_9377889_9380502_9380619_9383198_9383310_9384211_9384336_9384523
transcript_140565.known	chr3	+	2390	10	FSM	ENSG00000134077.16	ENST00000515662.6	2390	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	128.825271656162	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGGCTCACGACTGTA	9358051	True	NA	5	True	TTTAAA	-18	NA	9363097	9384870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9363729_9365015_9365321_9366907_9366986_9371059_9371537_9374515_9374647_9377818_9377889_9380502_9380619_9383198_9383310_9384211_9384336_9384523
transcript_140598.known	chr3	-	793	5	FSM	ENSG00000206573.10	ENST00000521609.5	793	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	43.3618495915476	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATTTTTTTTCTCTTGG	-9397372	False	NA	-4	True	ATTAAA	-16	NA	9397428	9385794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9385924_9388086_9388128_9390279_9390498_9391426_9391827_9397423
transcript_1406.nic	chr1	-	871	5	ISM	ENSG00000162585.17	ENST00000428120.5	2313	8	-44	5070	-10	0	5prime_fragment	FALSE	canonical	3	145	junction_2	479.152898352916	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCTGCCGCTTTTCTTTCT	-2181882	True	NA	-5	True	ATTAAA	-40	NA	2194785	2189547	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_2189782_2192844_2192976_2193638_2193911_2193997_2194134_2194687
transcript_140601.nic	chr3	-	547	5	FSM	ENSG00000206573.10	ENST00000685076.1	550	5	-2	5	-2	0	multi-exon	FALSE	canonical	3	50	junction_2	23.466731770743	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATTTTTTTTCTCTTGG	-9395041	True	NA	-4	True	ATTAAA	-16	NA	9397444	9385794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9385924_9388086_9388128_9390289_9390498_9391678_9391827_9397423
transcript_140606.nic	chr3	+	572	4	ISM	ENSG00000134077.16	ENST00000452837.7	3754	10	-16	15633	-13	59	5prime_fragment	FALSE	canonical	3	167	junction_1	113.10467128579	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAAAGCGCAAAAAGATAAA	9357991	True	NA	-62	True	AAAAAG	-7	NA	9363037	9371158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_9363128_9365015_9365321_9366907_9366986_9371059
transcript_140610.nnic	chr3	+	747	4	NNC	ENSG00000134077.16	novel	3961	10	NA	NA	-3	59	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	178.797837421672	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAAAGCGCAAAAAGATAAA	9358001	True	NA	-62	True	AAAAAG	-7	NA	9363047	9371158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_9363313_9365015_9365321_9366907_9366986_9371059
transcript_140611.nic	chr3	+	960	4	NIC	ENSG00000134077.16	novel	2390	10	NA	NA	-3	59	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	165.235858362793	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAAAGCGCAAAAAGATAAA	9358001	True	NA	-62	True	AAAAAG	-7	NA	9363047	9371158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_9363526_9365015_9365321_9366907_9366986_9371059
transcript_140615.known	chr3	-	667	4	FSM	ENSG00000206573.10	ENST00000467069.6	667	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	45.5192267069642	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATGATCTTGAATAGTG	-9397373	False	NA	NA	False	NA	NA	NA	9397429	9389491	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9389797_9390289_9390498_9391678_9391827_9397423
transcript_140621.known	chr3	-	583	3	FSM	ENSG00000206573.10	ENST00000489616.1	583	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	41.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCCTAAGTATAAACATAAG	-9396578	False	NA	NA	False	TTTAAA	-19	NA	9396634	9390137	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9390498_9391678_9391827_9396559
transcript_140622.known	chr3	-	1878	3	FSM	ENSG00000206573.10	ENST00000522525.6	1878	3	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	15	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACATTTGGTTGAATCTG	-9397448	False	NA	-5	True	ATTAAA	-19	NA	9397504	9388848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9390498_9391678_9391827_9397423
transcript_140626.known	chr3	-	2095	3	FSM	ENSG00000206573.10	ENST00000664441.2	2116	3	0	21	0	0	multi-exon	FALSE	canonical	3	18	junction_1	47.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAATATTCTCAAATAT	-9395091	True	NA	-30	True	TATAAA	-37	NA	9397494	9388873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9390498_9391426_9391827_9397423
transcript_140627.known	chr3	-	484	2	FSM	ENSG00000254485.5	ENST00000466431.6	484	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAATTCAGGATTGATCCC	-9362919	False	NA	NA	False	AATAAA	-19	NA	9362941	9349684	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9350067_9362839
transcript_140628.known	chr3	-	1831	2	FSM	ENSG00000206573.10	ENST00000469846.3	3045	2	53	1161	1	0	multi-exon	FALSE	canonical	3	113	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATATTTTTTCATTTA	-9395038	True	NA	-3	True	AATAAA	-15	NA	9397441	9390013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9391827_9397423
transcript_140636.nic	chr3	-	4833	4	NIC	ENSG00000156959.9	novel	4900	4	NA	NA	-18	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_1	19.9053315024448	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGCTGCCACTTCTCTG	-9552489	True	NA	-1	True	AATAAA	-21	NA	9553840	9498360	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_9502312_9505966_9506204_9552273_9552763_9553684
transcript_140637.known	chr3	-	4900	4	FSM	ENSG00000156959.9	ENST00000287585.8	4900	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.8954920234218	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGCTGCCACTTCTCTG	-9552471	True	NA	-1	True	AATAAA	-21	NA	9553822	9498360	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9502312_9505966_9506204_9552273_9552848_9553684
transcript_140647.known	chr3	-	302	2	FSM	ENSG00000156959.9	ENST00000498277.1	302	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTGGTGGTCTTCATCCA	-9552444	True	NA	NA	False	NA	NA	NA	9553795	9552571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9552763_9553684
transcript_14065.known	chr1	+	1003	4	FSM	ENSG00000143553.11	ENST00000368685.6	1003	4	0	0	0	0	multi-exon	FALSE	canonical	3	663	junction_3	45.675181687895	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAAGGTTCCAGGAGTTT	153654329	True	NA	37	True	AATAAA	-35	NA	153658702	153661852	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_153658887_153659137_153659185_153659447_153659567_153661199
transcript_140658.known	chr3	+	2452	19	FSM	ENSG00000163719.20	ENST00000296003.9	2452	19	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_17	113.887981026192	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGTGTCATCATTTGGT	9642758	True	NA	21	True	AATAAA	-24	NA	9649504	9702393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9649743_9653620_9653770_9662266_9662376_9668718_9668795_9669431_9669493_9671047_9671171_9672684_9672759_9677316_9677388_9677983_9678059_9683177_9683245_9684584_9684671_9684887_9684965_9685210_9685248_9687820_9687892_9688695_9688755_9688943_9689083_9689963_9690144_9697710_9697867_9701789
transcript_140666.known	chr3	+	2368	18	FSM	ENSG00000163719.20	ENST00000353332.9	2368	18	0	0	0	0	multi-exon	TRUE	canonical	3	209	junction_17	93.7349572706622	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGTGTCATCATTTGGT	NA	False	NA	21	True	AATAAA	-24	NA	9649432	9702393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9649743_9653620_9653770_9662266_9662376_9668718_9668795_9669431_9669493_9671047_9671171_9672684_9672759_9677316_9677388_9677983_9678059_9683177_9683245_9684584_9684671_9684887_9684965_9685210_9685248_9687820_9687892_9688695_9688755_9688943_9689083_9689963_9690144_9701789
transcript_14067.known	chr1	+	922	3	FSM	ENSG00000143553.11	ENST00000462880.1	922	3	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	291	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTAGTTTACTCTGGT	153654340	True	NA	14	True	AATAAA	-12	NA	153658713	153661829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_153658887_153659447_153659567_153661199
transcript_140691.known	chr3	+	2105	17	FSM	ENSG00000163719.20	ENST00000351233.9	2105	17	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_16	108.465432281442	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTCTTGTGTCATCATT	9642765	True	NA	17	True	AATAAA	-20	NA	9649511	9702389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9649743_9653620_9653770_9662266_9662376_9668718_9668795_9669431_9669493_9671047_9671171_9672684_9672759_9677316_9677388_9677983_9678059_9683177_9683245_9684584_9684671_9684887_9684965_9685210_9685248_9687820_9687892_9688695_9688755_9688943_9689083_9701789
transcript_14070.known	chr1	+	4185	22	FSM	ENSG00000169418.10	ENST00000368680.4	4185	22	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_21	15.6597900670255	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTCTCTTCTTGAGGGA	153678043	True	NA	27	True	ATTAAA	-17	NA	153678687	153693992	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_153679830_153680500_153680701_153681179_153681294_153681703_153681840_153682497_153682590_153683375_153683512_153683739_153683825_153684963_153685085_153685805_153685881_153686122_153686201_153686645_153686751_153687015_153687088_153687199_153687357_153687633_153687790_153688052_153688222_153688952_153689100_153689187_153689312_153689452_153689522_153689805_153689981_153690283_153690383_153693105_153693198_153693351
transcript_140731.known	chr3	+	4604	14	FSM	ENSG00000156983.17	ENST00000424362.7	4604	14	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	22.8377347864782	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATAAACTGTCAATTTA	9730460	False	NA	4	True	AATATA	-11	NA	9731847	9747992	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9732139_9734130_9734740_9738998_9739959_9740778_9740942_9741307_9741440_9742024_9742172_9742943_9743254_9743580_9743902_9744223_9744509_9745007_9745156_9745572_9745710_9745811_9745931_9746299_9746455_9747165
transcript_140733.known	chr3	+	4666	13	FSM	ENSG00000156983.17	ENST00000683639.1	4666	13	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	20.584514136171	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	9730366	True	NA	NA	False	NA	NA	NA	9731753	9747873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9732139_9734130_9734740_9738998_9739959_9740778_9740942_9741307_9741440_9742024_9742154_9742943_9743254_9743577_9743902_9744223_9744509_9745007_9745156_9745572_9745931_9746299_9746455_9747165
transcript_140734.known	chr3	+	4402	13	FSM	ENSG00000156983.17	ENST00000684206.1	4402	13	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_8	26.0142856053276	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTCAATTTAGAATTCT	9730366	True	NA	11	True	AATATA	-18	NA	9731753	9747999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9732139_9734130_9734740_9738998_9739959_9740778_9740942_9741307_9741440_9742024_9742154_9742943_9743254_9743580_9743902_9745007_9745156_9745572_9745710_9745811_9745931_9746299_9746455_9747165
transcript_14076.nnic	chr1	+	4217	21	NIC	ENSG00000169418.10	novel	4185	22	NA	NA	-110	0	combination_of_known_splicesites	TRUE	canonical	2	3	junction_9	23.6909265331688	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTCTCTTCTTGAGGGA	153677933	True	NA	27	True	ATTAAA	-17	NA	153678577	153693992	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_153679830_153680500_153680701_153681179_153681294_153681703_153681840_153682497_153682590_153683375_153683512_153683739_153683825_153684963_153685085_153685805_153685881_153686645_153686751_153687015_153687088_153687199_153687357_153687633_153687790_153688052_153688222_153688952_153689100_153689187_153689312_153689452_153689522_153689805_153689981_153690283_153690383_153693105_153693198_153693351
transcript_140762.known	chr3	-	1453	12	FSM	ENSG00000134072.11	ENST00000256460.8	1453	12	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_10	4.53999672333955	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTAGCGCTGTCTCCCTC	-9769569	True	NA	NA	False	AATAAA	-16	NA	9769947	9757346	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9757622_9757728_9757847_9759487_9759576_9759671_9759751_9760655_9760769_9761460_9761537_9761630_9761758_9762913_9763053_9763138_9763214_9765758_9765891_9767666_9767782_9769831
transcript_140773.known	chr3	-	1974	9	FSM	ENSG00000171148.14	ENST00000301964.7	1974	9	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_3	26.2270733212839	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCCAGTCTTTGAATGTC	-9792461	False	NA	-3	True	AATAAA	-27	NA	9792473	9779966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9780550_9784027_9784214_9785315_9785426_9787005_9787110_9787198_9787341_9789508_9789615_9789712_9789964_9791259_9791494_9792215
transcript_140774.known	chr3	-	1617	9	FSM	ENSG00000171148.14	ENST00000440161.5	1617	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	127.697335034839	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGCGGCAGTCTCTAGA	NA	False	NA	NA	False	NA	NA	NA	9793011	9780255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9780550_9784027_9784214_9785315_9785426_9787005_9787110_9787198_9787341_9789508_9789615_9789712_9789964_9791259_9791494_9792821
transcript_140779.nic	chr3	-	1306	9	NIC	ENSG00000156990.14	novel	1225	9	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	238.900574245857	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATGGTTTTGAGGATTT	-9836670	True	NA	-13	True	AATAAA	-14	NA	9844050	9837848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_9838208_9838984_9839172_9840183_9840308_9840531_9840617_9840697_9840806_9841982_9842083_9842198_9842244_9843464_9843602_9843889
transcript_140786.known	chr3	-	1225	9	FSM	ENSG00000156990.14	ENST00000383820.9	1225	9	0	0	0	0	multi-exon	FALSE	canonical	3	612	junction_1	72.9373661095601	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATGGTTTTGAGGATTT	-9836636	True	NA	-13	True	AATAAA	-14	NA	9844016	9837848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9838208_9839031_9839172_9840183_9840308_9840531_9840617_9840697_9840806_9841982_9842083_9842198_9842244_9843464_9843602_9843889
transcript_140788.known	chr3	-	907	9	FSM	ENSG00000156990.14	ENST00000427174.5	907	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	252.624690746966	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCTGCCCAGCTGCCC	-9836606	True	NA	NA	False	NA	NA	NA	9843986	9838164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9838208_9839031_9839172_9840183_9840336_9840531_9840617_9840697_9840806_9841982_9842083_9842198_9842244_9843464_9843602_9843889
transcript_140792.known	chr3	+	903	8	FSM	ENSG00000250151.9	ENST00000424442.5	903	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	394.491302508816	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGGGGGCCAAGATGAT	9781246	True	NA	NA	False	NA	NA	NA	9793081	9813351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9793125_9797658_9797778_9800184_9800297_9801660_9801757_9803842_9804014_9810620_9810710_9812942_9813112_9813247
transcript_140801.known	chr3	-	2554	8	FSM	ENSG00000171148.14	ENST00000343450.2	2554	8	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_2	23.6875925500319	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTAATTAACTGTTAACAT	-9790543	True	NA	NA	False	AATAAA	-22	NA	9792736	9783127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9784214_9785315_9785426_9787005_9787110_9787198_9787341_9789508_9789615_9789712_9789964_9791259_9791494_9792215
transcript_140805.known	chr3	-	1178	8	FSM	ENSG00000156990.14	ENST00000433535.6	1178	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	247.281629082374	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATGGTTTTGAGGATTT	-9836634	True	NA	-13	True	AATAAA	-14	NA	9844014	9837848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9838208_9839031_9839172_9840183_9840308_9840531_9840617_9840697_9840806_9841982_9842083_9843464_9843602_9843889
transcript_140809.nic	chr3	-	1119	8	NIC	ENSG00000156990.14	novel	1225	9	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_1	246.775614843997	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATGGTTTTGAGGATTT	-9836670	True	NA	-13	True	AATAAA	-14	NA	9844050	9837848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_9838208_9840183_9840308_9840531_9840617_9840697_9840806_9841982_9842083_9842198_9842244_9843464_9843602_9843889
transcript_140810.known	chr3	+	1630	7	FSM	ENSG00000114026.22	ENST00000344629.12	1630	7	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_6	43.4766859618143	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGAGGAGTGGTAGGG	9749026	True	NA	16	True	AATAAA	-23	NA	9749951	9757407	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9754703_9754886_9756470_9756622_9756766_9756817_9757060
transcript_140811.known	chr3	+	2220	7	FSM	ENSG00000114026.22	ENST00000302036.11	2220	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	59.4467548876023	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATCTCTCGTGGTGAAA	NA	False	NA	94	True	NA	NA	NA	9749943	9766737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9754703_9754886_9756470_9756622_9756766_9756817_9765808
transcript_140816.known	chr3	+	957	7	FSM	ENSG00000241553.13	ENST00000417500.5	957	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	367.372389030834	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCCTGGGCCGGGACAGA	9781246	True	NA	-56	True	NA	NA	NA	9793081	9806436	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9793125_9797658_9797778_9799878_9800068_9800184_9800297_9801660_9801757_9803842_9804014_9806209
transcript_140817.known	chr3	+	910	7	FSM	ENSG00000241553.13	ENST00000440787.5	910	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	369.321750720907	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGCTTCTGATGTTCAG	9781257	True	NA	-75	True	AAGAAA	-41	NA	9793092	9806417	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9793125_9797658_9797778_9800184_9800297_9801660_9801757_9803535_9803708_9803842_9804014_9806209
transcript_140824.known	chr3	-	955	7	FSM	ENSG00000156990.14	ENST00000418713.5	955	7	0	0	0	0	multi-exon	FALSE	canonical	3	674	junction_1	58.54343117151	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGCACTCCAGTCTAGG	-9836622	True	NA	NA	False	NA	NA	NA	9844002	9839940	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9840308_9840531_9840617_9840697_9840806_9841982_9842083_9842198_9842244_9843464_9843602_9843889
transcript_140826.known	chr3	+	1815	6	FSM	ENSG00000114026.22	ENST00000339511.9	1815	6	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_4	22.8175371151227	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAATAAAATAGAAACATTT	9749055	False	NA	-14	True	NA	NA	NA	9749980	9757377	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9754703_9754886_9756470_9756622_9756766
transcript_140829.known	chr3	+	942	6	FSM	ENSG00000241553.13	ENST00000498623.6	942	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	316.141107735138	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCCGGGACAGATTTTTT	9790651	True	NA	-50	True	NA	NA	NA	9792494	9806442	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9792706_9797658_9797778_9800184_9800297_9801660_9801757_9803842_9804014_9806209
transcript_140831.known	chr3	+	1433	6	FSM	ENSG00000241553.13	ENST00000397261.8	1433	6	0	0	0	0	multi-exon	FALSE	canonical	3	427	junction_1	169.624762343238	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTATGCTGTGTGTGTGT	9781246	True	NA	39	True	ATTAAA	-31	NA	9793081	9807101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9793125_9797658_9797778_9800184_9800297_9801660_9801757_9803842_9804014_9806209
transcript_140834.known	chr3	+	926	6	FSM	ENSG00000241553.13	ENST00000433034.1	926	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	320.909083698171	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTATACGTTATTGGTTG	9781281	True	NA	80	True	TTTAAA	-33	NA	9793116	9806572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9793182_9797658_9797778_9800184_9800297_9801660_9801757_9803842_9804014_9806209
transcript_140836.known	chr3	+	1950	5	FSM	ENSG00000114026.22	ENST00000349503.9	1950	5	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_4	79.5561908339005	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCTAGGGTATTCTTTC	NA	False	NA	25	True	AATAAA	-33	NA	9749943	9766668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9754703_9754886_9765808
transcript_140837.known	chr3	+	747	5	FSM	ENSG00000114026.22	ENST00000429146.5	747	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	83.3981414661022	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGGACTCTTCCACCA	9750341	False	NA	NA	False	NA	NA	NA	9750354	9756865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9756470_9756622_9756766
transcript_140850.known	chr3	-	1178	4	FSM	ENSG00000156990.14	ENST00000433972.1	1178	4	0	0	0	0	multi-exon	FALSE	canonical	3	737	junction_3	48.4722142629729	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCAGTGTGCAGTCATTT	NA	False	NA	-5	True	AATAGA	-15	NA	9844059	9841256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9842083_9842198_9842244_9843464_9843602_9843889
transcript_140856.known	chr3	-	807	3	FSM	ENSG00000156990.14	ENST00000433555.1	807	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	405	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGATGGCAGCTGCAATA	-9836596	True	NA	NA	False	NA	NA	NA	9843976	9841407	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9842083_9842198_9842244_9843889
transcript_140858.known	chr3	+	506	2	FSM	ENSG00000241553.13	ENST00000479956.1	506	2	0	0	0	0	multi-exon	FALSE	canonical	3	427	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTCCC	9781246	True	NA	NA	False	NA	NA	NA	9793081	9798121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9793125_9797658
transcript_140859.known	chr3	+	1637	2	FSM	ENSG00000171135.15	ENST00000647897.1	1637	2	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_1	0	263	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGCAGTATTTATTGCA	9885218	True	NA	11	True	ATTAAA	-25	NA	9890609	9894349	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9890812_9892914
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transcript_140946.known	chr3	+	2175	11	FSM	ENSG00000163703.20	ENST00000684212.1	2175	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_9	58.8582194769771	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTGTGGTCGCCATTA	9934370	False	NA	-17	True	NA	NA	NA	9934419	9945370	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9943173_9943380_9943516_9943993_9944096_9944364
transcript_140953.known	chr3	+	2595	10	FSM	ENSG00000163703.20	ENST00000683239.1	2595	10	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	53.7141496864952	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCATCTCAGGAAATAAAGAA	9932495	True	NA	-24	True	NA	NA	NA	9933809	9944993	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9933921_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9944096_9944364
transcript_140956.known	chr3	+	2659	10	FSM	ENSG00000163703.20	ENST00000684291.1	2659	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	51.218486246016	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGACCAGAGCCTCCA	9932524	True	NA	-2	True	AATAAA	-12	NA	9933838	9945385	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941017_9941110_9941207_9942812_9942897_9943076_9943173_9943380_9943516_9944364
transcript_140960.nic	chr3	+	2855	9	ISM	ENSG00000163703.20	ENST00000683279.1	2522	11	-5	327	-5	0	intron_retention	FALSE	canonical	3	80	junction_1	35.035473095136	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCATCAGTCTTACTACC	9932473	True	NA	13	True	AATAAA	-21	NA	9933787	9945030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_9933853_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076
transcript_140962.known	chr3	+	2872	9	FSM	ENSG00000163703.20	ENST00000467713.6	2872	9	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	43.883368147853	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAAAGGCATCAGTCTTA	9932519	True	NA	8	True	AATAAA	-16	NA	9933833	9945025	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9933921_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076
transcript_140963.known	chr3	+	1824	9	FSM	ENSG00000163703.20	ENST00000684532.1	1824	9	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_8	19.5667926600146	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATCAGGTGTGTGGGAG	9934370	False	NA	NA	False	AGTAAA	-40	NA	9934419	9944272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9943173_9943380
transcript_140964.known	chr3	+	2992	9	FSM	ENSG00000163703.20	ENST00000682884.1	2992	9	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_8	43.883368147853	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAGGCATCAGTCTTAC	9932630	False	NA	9	True	AATAAA	-17	NA	9933944	9945026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9944096_9944364
transcript_140970.known	chr3	+	3370	8	FSM	ENSG00000163703.20	ENST00000683888.1	3370	8	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_5	16.1586521967745	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAAAAGGCATCAGTCTT	9932519	True	NA	7	True	AATAAA	-15	NA	9933833	9945024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076
transcript_140974.known	chr3	+	3144	6	FSM	ENSG00000163703.20	ENST00000682906.1	3144	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	68.1281146077007	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCTTGGAAAGTTAAAAGG	9932532	True	NA	-3	True	AATAAA	-5	NA	9933846	9945014	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9934613_9934834_9934918_9940849_9941027_9941110_9941207_9942812_9942897_9943076
transcript_140975.known	chr3	+	2198	2	FSM	ENSG00000163703.20	ENST00000684659.1	2198	2	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGTCATTTTCTCTTTT	9932524	True	NA	5	True	AATAAA	-19	NA	9933838	9936258	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9934613_9934834
transcript_140983.nnic	chr3	-	3909	4	NNC	ENSG00000163704.12	novel	3775	4	NA	NA	12	0	intron_retention	FALSE	canonical	3	20	junction_3	15.6418242755334	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGCTTCCCTCTGGCCA	-9951077	True	NA	-7	True	AATAAA	-15	NA	9952362	9945541	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_9948002_9948757_9948914_9949100_9950173_9952141
transcript_140984.known	chr3	-	3775	4	FSM	ENSG00000163704.12	ENST00000412055.6	3775	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	4.54606056566195	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGCTTCCCTCTGGCCA	-9951123	True	NA	-7	True	AATAAA	-15	NA	9952408	9945541	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9948002_9948757_9948914_9949100_9950173_9952321
transcript_140985.nnic	chr3	-	3629	4	NNC	ENSG00000163704.12	novel	3775	4	NA	NA	12	-280	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	15.6418242755334	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATCCCCAGGCCTCTCTA	-9951077	True	NA	NA	False	NA	NA	NA	9952362	9945821	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_9948002_9948757_9948914_9949100_9950173_9952141
transcript_140993.known	chr3	-	1475	3	FSM	ENSG00000163704.12	ENST00000411976.2	1475	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGGAGAAGTCATTTGCC	-9951105	True	NA	3	True	AATAAA	-19	NA	9952390	9948579	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9948914_9949100_9950173_9952321
transcript_140998.known	chr3	-	2777	8	FSM	ENSG00000125037.13	ENST00000245046.7	2353	8	-279	-145	-277	145	multi-exon	FALSE	canonical	3	395	junction_7	25.0420055270405	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAATTTTTTATTATT	NA	False	NA	NA	False	NA	NA	NA	9987120	9962536	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9964198_9969718_9969802_9970581_9970662_9973627_9973710_9974383_9974489_9976956_9977051_9977388_9977447_9986506
transcript_141001.known	chr3	-	1909	7	FSM	ENSG00000125037.13	ENST00000487465.5	1909	7	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_6	26.289520514625	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTCAGCCTGATAAAGGA	-9984657	True	NA	NA	False	AAAAAG	-8	NA	9986838	9968643	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_9969802_9970581_9970662_9973627_9973710_9974383_9974489_9976956_9977051_9977388_9977447_9986506
transcript_141005.known	chr3	+	558	4	FSM	ENSG00000180385.9	ENST00000440568.1	558	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	10.8730042868667	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTGCAGACCCAGAAACC	9987179	False	NA	NA	False	NA	NA	NA	9987214	10003097	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9987265_9987814_9987906_9988711_9988748_10002716
transcript_141011.known	chr3	+	2882	2	FSM	ENSG00000180385.9	ENST00000326237.3	2882	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCAC	9983587	True	NA	NA	False	NA	NA	NA	9986910	10005244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_9987265_10002716
transcript_141013.known	chr3	-	854	3	FSM	ENSG00000186162.11	ENST00000424471.2	1136	3	18	264	9	-263	multi-exon	FALSE	canonical	2	6	junction_1	15.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGTTGGCCAAAGGAGAA	-10025592	True	NA	NA	False	GGGGCT	-12	NA	10026357	10017752	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_10018072_10023529_10023748_10026040
transcript_141015.known	chr3	-	1088	3	FSM	ENSG00000186162.11	ENST00000424691.2	1130	3	30	12	1	-7	multi-exon	FALSE	canonical	3	15	junction_1	11	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTATCTTTGCCTGTGT	-10025600	True	NA	-8	True	AATAAA	-11	NA	10026365	10017496	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_10018072_10023559_10023748_10026040
transcript_141016.known	chr3	-	1794	3	FSM	ENSG00000186162.11	ENST00000432401.6	1813	3	18	1	9	0	multi-exon	FALSE	canonical	2	3	junction_1	17	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGAATCATATAGTCTTT	-10025592	True	NA	NA	False	ATTAAA	-17	NA	10026357	10014237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_10015527_10023559_10023748_10026040
transcript_141017.known	chr3	-	1107	2	FSM	ENSG00000186162.11	ENST00000445082.1	1107	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTCATTGAATTCATTAA	-10025561	True	NA	NA	False	AAAAAG	-12	NA	10026326	10022926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_10023748_10026040
transcript_141018.known	chr3	+	5185	44	FSM	ENSG00000144554.13	ENST00000419585.5	5185	44	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	20.5619011606462	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTCAGTTGCCTCATTTA	10017889	False	NA	16	True	AATAAA	-16	NA	10026498	10101930	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_10026627_10028624_10028722_10032831_10032973_10034468_10034537_10034694_10034799_10035172_10035234_10036286_10036340_10039278_10039358_10039720_10039846_10041622_10041711_10042558_10042664_10043049_10043151_10043483_10043593_10043828_10043865_10046579_10046724_10047916_10048052_10049373_10049506_10052386_10052498_10060293_10060404_10062150_10062212_10063791_10063912_10064355_10064430_10064728_10064876_10065393_10065495_10065863_10065980_10067208_10067318_10072870_10072982_10073252_10073363_10074529_10074674_10078080_10078198_10081099_10081229_10081345_10081465_10085811_10085923_10087133_10087265_10088448_10088543_10088827_10088951_10090291_10090386_10092180_10092253_10093284_10093324_10094288_10094364_10095199_10095275_10096325_10096473_10098719_10098816_10101187
transcript_141024.nic	chr3	+	2811	27	ISM	ENSG00000144554.13	ENST00000419585.5	5185	44	-62	28966	0	0	5prime_fragment	FALSE	canonical	3	36	junction_1	19.9435594147629	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAGGAAAAATAGGTA	10017827	True	NA	16	True	NA	NA	NA	10026436	10072964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_10026627_10028624_10028722_10032831_10032973_10034468_10034537_10034694_10034799_10035172_10035234_10036286_10036340_10039278_10039358_10039720_10039846_10041622_10041711_10042558_10042664_10043049_10043151_10043483_10043593_10043828_10043865_10046579_10046724_10047916_10048052_10049373_10049506_10052386_10052498_10060293_10060404_10062150_10062212_10063791_10063912_10064355_10064430_10064728_10064876_10065393_10065495_10065863_10065980_10067208_10067318_10072870
transcript_141034.known	chr3	+	5096	44	FSM	ENSG00000144554.13	ENST00000675286.1	5096	44	0	0	0	0	multi-exon	TRUE	canonical	3	68	junction_1	18.2313419148219	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTTGCCTCATTTATC	10017827	True	NA	18	True	AATAAA	-18	NA	10026436	10101932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_10026474_10028624_10028722_10032831_10032973_10034468_10034537_10034694_10034799_10035172_10035234_10036286_10036340_10039278_10039358_10039720_10039846_10041622_10041711_10042558_10042664_10043049_10043151_10043483_10043593_10043828_10043865_10046579_10046724_10047916_10048052_10049373_10049506_10052386_10052498_10060293_10060404_10062150_10062212_10063791_10063912_10064355_10064430_10064728_10064876_10065393_10065495_10065863_10065980_10067208_10067318_10072870_10072982_10073252_10073363_10074529_10074674_10078080_10078198_10081099_10081229_10081345_10081465_10085811_10085923_10087133_10087265_10088448_10088543_10088827_10088951_10090291_10090386_10092180_10092253_10093284_10093324_10094288_10094364_10095199_10095275_10096325_10096473_10098719_10098816_10101187
transcript_141035.nnic	chr3	+	969	4	NNC	ENSG00000254999.4	novel	1150	3	NA	NA	-27	-273	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_2	826.144593209257	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGACTGCTGTGATTAT	10093970	True	NA	23	True	AATAAA	-14	NA	10115647	10126917	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_10115820_10118905_10118971_10125625_10125709_10126268
transcript_141037.known	chr3	+	1150	3	FSM	ENSG00000254999.4	ENST00000530758.2	1150	3	0	0	0	0	multi-exon	FALSE	canonical	3	1802	junction_2	19.5	982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATGCTTACAGTCTTTT	10093997	True	NA	20	True	AATAAA	-21	NA	10115674	10127190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_10115820_10125625_10125709_10126268
transcript_141048.nnic	chr3	+	1738	4	NNC	ENSG00000134086.8	novel	4414	3	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	37.5972812255827	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGCCGGGCATGGTGGCT	10141744	False	NA	NA	False	NA	NA	NA	10141765	10152082	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_10142188_10146513_10146637_10149786_10150930_10152032
transcript_141049.nnic	chr3	+	2035	4	NNC	ENSG00000134086.8	novel	4414	3	NA	NA	-12	-86	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	37.5972812255827	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAAGTTCCTATTTCAAG	10141744	False	NA	12	True	ATTAAA	-20	NA	10141765	10153581	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_10142188_10146513_10146637_10149786_10150930_10153234
transcript_141050.nnic	chr3	+	2121	4	NNC	ENSG00000134086.8	novel	4414	3	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	37.5972812255827	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCAGGGTGTGTTGTGTG	10141744	False	NA	10	True	ATTAAA	-20	NA	10141765	10153667	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_10142188_10146513_10146637_10149786_10150930_10153234
transcript_141053.nnic	chr3	+	1955	4	NNC	ENSG00000134086.8	novel	4414	3	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	37.5972812255827	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCAGGGTGTGTTGTGTG	10141744	False	NA	10	True	ATTAAA	-20	NA	10141765	10153667	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_10142188_10146513_10146637_10149786_10150930_10153400
transcript_141055.nnic	chr3	+	2127	4	NNC	ENSG00000134086.8	novel	4414	3	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	37.5972812255827	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCAGGGTGTGTTGTGTG	10141744	False	NA	10	True	ATTAAA	-20	NA	10141765	10153667	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_10142188_10146513_10146637_10149786_10150945_10153243
transcript_141056.nnic	chr3	+	2006	4	NNC	ENSG00000134086.8	novel	4414	3	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	37.5972812255827	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCAGGGTGTGTTGTGTG	10141744	False	NA	10	True	ATTAAA	-20	NA	10141765	10153667	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_10142188_10146513_10146637_10149786_10150945_10153364
transcript_141069.known	chr3	+	4414	3	FSM	ENSG00000134086.8	ENST00000256474.3	4414	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	12	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCAGGGTGTGTTGTGTG	10136533	True	NA	10	True	ATTAAA	-20	NA	10141777	10153667	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_10142188_10146513_10146637_10149786
transcript_141071.known	chr3	+	958	3	FSM	ENSG00000134086.8	ENST00000477538.1	958	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	38.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACATCACAAAATGTAATT	10142515	False	NA	NA	False	AAGAAA	-39	NA	10142545	10150145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_10143022_10146513_10146637_10149786
transcript_141074.known	chr3	+	2696	2	FSM	ENSG00000134086.8	ENST00000345392.2	2696	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGCCGGGCATGGTGGCT	10136543	True	NA	NA	False	NA	NA	NA	10141787	10152082	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_10142188_10149786
transcript_141077.known	chr3	+	3431	13	FSM	ENSG00000134070.5	ENST00000256458.5	3431	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.749073959734	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACAACTTGTAATTAGTT	10164808	True	NA	NA	False	AATAAA	-20	NA	10164918	10243745	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_10165049_10177837_10178021_10200368_10200516_10209588_10209693_10213206_10213402_10213483_10213549_10216933_10217049_10219679_10219790_10222635_10222832_10226370_10226434_10234458_10234660_10238747_10239040_10242115
transcript_141092.known	chr3	-	1363	10	FSM	ENSG00000157020.18	ENST00000337354.8	1363	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_9	442.807987258865	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCTGCGTTATCCTAA	-10305351	True	NA	-4	True	AATAAA	-17	NA	10321082	10300930	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_10301375_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10319138_10319173_10321049
transcript_141101.nic	chr3	-	1866	9	NIC	ENSG00000157020.18	novel	1467	9	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_8	352.086082336408	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCTGCGTTATCCTAA	-10305347	True	NA	-4	True	AATAAA	-17	NA	10321078	10300930	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_10301375_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10320508
transcript_141103.known	chr3	-	1467	9	FSM	ENSG00000157020.18	ENST00000397109.7	1467	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_8	365.144984047433	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCTGCGTTATCCTAA	-10305310	True	NA	-4	True	AATAAA	-17	NA	10321041	10300930	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_10301375_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10320870
transcript_141104.known	chr3	-	1359	9	FSM	ENSG00000157020.18	ENST00000350697.8	1359	9	0	0	0	0	multi-exon	FALSE	canonical	3	790	junction_8	121.040734362445	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCTGCGTTATCCTAA	-10305381	True	NA	-4	True	AATAAA	-17	NA	10321112	10300930	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_10301375_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10321049
transcript_141110.known	chr3	-	1603	9	FSM	ENSG00000157020.18	ENST00000397117.5	1603	9	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_8	428.242629825663	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCATATTGCTTATAAT	-10305330	True	NA	-23	True	ACTAAA	-2	NA	10321061	10300949	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_10301148_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10320508
transcript_141113.nic	chr3	-	1208	9	NIC	ENSG00000157020.18	novel	1603	9	NA	NA	-95	0	combination_of_known_junctions	FALSE	canonical	3	187	junction_1	310.476649685608	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCATATTGCTTATAAT	-10305476	True	NA	-23	True	ACTAAA	-2	NA	10321207	10300949	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_10301148_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10321049
transcript_141116.known	chr3	+	5342	8	FSM	ENSG00000157014.11	ENST00000287652.8	5342	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_7	7.90763000177031	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCAGTCTCTCCGTGTTT	NA	False	NA	21	True	AATAAA	-19	NA	10248022	10281216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_10249068_10249194_10249615_10260136_10260671_10270130_10271016_10276360_10276489_10278278_10278463_10278884_10279035_10279220
transcript_141118.known	chr3	+	4937	8	FSM	ENSG00000157014.11	ENST00000448281.7	4937	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	15.0047611491439	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTCTCTCCGTGTTTGT	10246821	True	NA	23	True	AATAAA	-21	NA	10248458	10281218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_10249068_10249194_10249615_10260136_10260671_10270130_10271016_10276360_10276489_10278278_10278463_10278884_10279064_10279220
transcript_141124.nic	chr3	+	3050	7	ISM	ENSG00000157014.11	ENST00000448281.7	4937	8	-9	2053	-9	0	5prime_fragment	FALSE	canonical	3	37	junction_4	6.15539510420646	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTTGAGTGACATGGT	10246812	True	NA	22	True	TATAAA	-24	NA	10248449	10279165	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_10249068_10249194_10249615_10260136_10260671_10270130_10271016_10276360_10276489_10278278_10278463_10278884
transcript_141129.known	chr3	-	883	5	FSM	ENSG00000157020.18	ENST00000397105.7	883	5	0	0	0	0	multi-exon	FALSE	canonical	3	790	junction_4	151.01552072552	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCATTCTTTACCCAACTT	-10305362	True	NA	NA	False	TATAAA	-4	NA	10321093	10311572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10321049
transcript_141132.known	chr3	+	4249	14	FSM	ENSG00000132164.10	ENST00000254488.7	4249	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_12	2.3858557568109	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGCTATTCCTAGCAAG	10816090	True	NA	2	True	ATTAAA	-15	NA	10816227	10940714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_10816522_10819464_10819600_10819711_10819853_10823301_10823393_10844213_10844347_10874960_10875096_10912089_10912194_10918328_10918454_10926003_10926117_10929201_10929340_10933150_10933254_10934065_10934167_10935028_10935200_10938249
transcript_141135.known	chr3	+	2794	4	FSM	ENSG00000132164.10	ENST00000454147.1	2794	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	2.05480466765633	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAATGTGTGGCTTTTCTTT	10816063	True	NA	NA	False	AATACA	-20	NA	10816200	10825498	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_10816522_10819464_10819600_10819711_10819853_10823301
transcript_141140.known	chr3	+	4959	19	FSM	ENSG00000197548.13	ENST00000354449.7	4959	19	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_11	11.1964776207123	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAGTAAGTATTAAGGTTT	11270149	True	NA	NA	False	AATAAA	-17	NA	11272415	11557665	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_11272431_11298685_11298856_11299361_11299417_11306942_11307061_11308983_11309062_11313303_11313421_11315343_11315494_11331339_11331429_11332971_11333094_11340644_11340736_11342134_11342280_11347876_11348036_11358417_11358613_11360580_11360785_11362812_11362929_11364658_11364735_11379971_11380053_11426803_11426927_11554810
transcript_141143.known	chr3	+	2296	18	FSM	ENSG00000197548.13	ENST00000354956.9	2296	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	25.3631070106135	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTCCTCCATGCAGTTT	11270149	True	NA	24	True	NA	NA	NA	11272415	11555083	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_11272431_11298685_11298856_11299361_11299417_11306942_11307061_11308983_11309062_11313303_11313421_11315343_11315494_11331339_11331429_11332971_11333094_11340644_11340736_11342134_11342280_11347876_11348036_11358417_11358613_11360580_11360785_11362812_11362929_11364658_11364735_11426803_11426927_11554810
transcript_141158.nic	chr3	-	3629	6	NIC	ENSG00000144560.16	novel	3725	6	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_5	40.8137231822827	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGTACGTGTGCAGTT	-11719454	False	NA	-4	True	AATAAA	-15	NA	11719672	11556068	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_11558828_11559331_11559456_11564796_11565020_11601832_11602023_11702970_11703048_11719416
transcript_141159.known	chr3	-	3725	6	FSM	ENSG00000144560.16	ENST00000273038.7	3725	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	44.2013574452188	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAGTGTACGTGTGCAGT	-11720528	True	NA	-5	True	AATAAA	-14	NA	11720746	11556069	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_11558828_11559331_11559456_11564796_11565020_11601832_11602023_11702970_11703048_11720393
transcript_141164.nic	chr3	-	1222	6	NIC	ENSG00000144560.16	novel	1428	7	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_5	40.8137231822827	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGGGGGTGGGGTGGGGG	-11719454	False	NA	NA	False	NA	NA	NA	11719672	11558475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_11558828_11559331_11559456_11564796_11565020_11601832_11602023_11702970_11703048_11719416
transcript_141166.known	chr3	-	3775	5	FSM	ENSG00000144560.16	ENST00000430365.7	3775	5	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_4	21.9928965804871	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGTACGTGTGCAGTT	-11642759	True	NA	-4	True	AATAAA	-15	NA	11643915	11556068	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_11558828_11559331_11559456_11564796_11565020_11601832_11602023_11643436
transcript_141171.known	chr3	-	938	4	FSM	ENSG00000144560.16	ENST00000451674.6	938	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	54.7803695577977	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGTGGAACATCTGTCTAAT	-11582278	True	NA	-6	True	NA	NA	NA	11582391	11558342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_11558828_11559331_11559456_11564796_11565020_11582285
transcript_141180.known	chr3	-	1213	8	FSM	ENSG00000144559.11	ENST00000455809.6	1326	8	113	0	7	0	multi-exon	FALSE	canonical	3	175	junction_5	17.4027912375326	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTTGTTACTTTGACC	NA	False	NA	-1	True	AATAAA	-24	NA	11846772	11790441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_11790582_11807832_11807896_11809516_11809683_11817191_11817338_11829713_11829865_11839221_11839315_11844028_11844212_11846501
transcript_141183.known	chr3	-	1297	7	FSM	ENSG00000144559.11	ENST00000273037.9	1297	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	71.3335280371174	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTTGTTACTTTGACC	NA	False	NA	-1	True	AATAAA	-24	NA	11846919	11790441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_11790582_11809516_11809683_11817191_11817338_11829713_11829865_11839221_11839315_11844028_11844212_11846501
transcript_141185.nic	chr3	-	1895	5	ISM	ENSG00000144559.11	ENST00000444133.6	1619	7	-144	8998	-4	796	5prime_fragment	FALSE	canonical	3	175	junction_2	19.8368344248774	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATTGTTTCAATTAATAT	NA	False	NA	NA	False	AATAAA	-14	NA	11846923	11816291	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_11817338_11829713_11829865_11839221_11839315_11844028_11844212_11846501
transcript_141188.known	chr3	-	1194	5	FSM	ENSG00000157150.5	ENST00000287814.5	1194	5	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_3	5.30919014539883	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTGTGGCTGTGTATCC	-12156465	True	NA	-24	True	CATAAA	-31	NA	12158912	12153067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_12153713_12154326_12154452_12156819_12156935_12157384_12157483_12158701
transcript_141194.known	chr3	+	1870	8	FSM	ENSG00000132170.24	ENST00000309576.11	1870	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.349927106111883	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTGATAGTATTTGAAGA	12287846	True	NA	NA	False	ATTAAA	-19	NA	12287859	12434344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_12288021_12312379_12312454_12379703_12379932_12381321_12381492_12392613_12392753_12405881_12406082_12416703_12417155_12433897
transcript_141196.known	chr3	-	3251	18	FSM	ENSG00000132155.14	ENST00000442415.7	3251	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	126.226577189304	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGCTGTTACCTCCTT	-12656362	True	NA	-26	True	AATAAA	-22	NA	12664117	12583600	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_12584658_12584846_12584982_12585121_12585254_12585680_12585800_12587590_12587638_12590797_12590975_12591707_12591793_12599690_12599809_12600151_12600280_12600387_12600416_12603477_12603538_12604135_12604290_12606200_12606300_12608765_12608924_12609232_12609336_12611949_12612063_12618514_12618748_12663812
transcript_141202.known	chr3	-	3191	17	FSM	ENSG00000132155.14	ENST00000251849.9	3191	17	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_16	36.6461116627672	931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGCTGTTACCTCCTT	-12656362	True	NA	-26	True	AATAAA	-22	NA	12664117	12583600	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_12584658_12584846_12584982_12585121_12585254_12585680_12585800_12587590_12587638_12590797_12590975_12591707_12591793_12599690_12599809_12600151_12600280_12600387_12600416_12604135_12604290_12606200_12606300_12608765_12608924_12609232_12609336_12611949_12612063_12618514_12618748_12663812
transcript_141209.known	chr3	-	2354	16	FSM	ENSG00000132155.14	ENST00000684903.1	3129	16	76	699	0	-405	multi-exon	FALSE	canonical	3	14	junction_14	96.6267503794311	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGAAGGAAGCCATTTGC	-12656370	True	NA	NA	False	NA	NA	NA	12664125	12584332	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_12584658_12584846_12584982_12585121_12585254_12585680_12585800_12587590_12587638_12590797_12590975_12591707_12591793_12599690_12599809_12600151_12600280_12600387_12600416_12604135_12604290_12606200_12606300_12608765_12608924_12609232_12609336_12618514_12618748_12663812
transcript_14121.known	chr1	+	2298	10	FSM	ENSG00000143554.14	ENST00000624995.4	2298	10	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	21.1980665319118	637	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCTGTCATTATCTCTCT	153775384	False	NA	26	True	AATAAA	-37	NA	153775406	153780157	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_153776165_153776517_153776728_153777061_153777221_153777760_153777886_153778160_153778356_153778462_153778554_153778686_153778886_153779113_153779212_153779342_153779474_153779825
transcript_141210.nic	chr3	-	3204	16	FSM	ENSG00000132155.14	ENST00000688543.1	4662	16	-42	1500	-28	0	multi-exon	FALSE	canonical	3	50	junction_11	89.6349634164407	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGCTGTTACCTCCTT	NA	False	NA	-26	True	AATAAA	-22	NA	12664229	12583600	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_12584658_12584846_12584982_12585121_12585254_12585680_12585800_12587590_12587638_12590797_12590975_12591707_12591793_12599690_12599809_12600151_12600280_12600387_12600416_12604135_12604290_12608765_12608924_12609232_12609336_12611949_12612063_12618514_12618748_12663812
transcript_141224.known	chr3	+	2425	13	FSM	ENSG00000154743.19	ENST00000680275.1	2425	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	42.7528426605244	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGTCTCAAAAAAAAAAAAAA	12482049	True	NA	NA	False	AATAGA	-10	NA	12484496	12533653	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12501667_12501725_12503261_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_141226.known	chr3	+	2383	13	FSM	ENSG00000154743.19	ENST00000680376.1	2383	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	41.6409920897932	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGTGAAACCTCCTCTC	12481987	True	NA	NA	False	NA	NA	NA	12484434	12533478	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12506707_12506836_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_141231.known	chr3	+	2618	13	FSM	ENSG00000154743.19	ENST00000679835.1	2618	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	46.3893546217472	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGTGAAACCTCCTCTC	12482115	True	NA	NA	False	NA	NA	NA	12484562	12533478	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_12484881_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12506707_12506836_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_141233.known	chr3	+	2283	13	FSM	ENSG00000154743.19	ENST00000679425.1	2283	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	37.4302128411439	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATATGAAAATAATTTTGT	12482115	True	NA	41	True	TTTAAA	-9	NA	12484562	12539658	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_12484881_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661_12532774_12539160
transcript_141235.known	chr3	+	2444	12	FSM	ENSG00000154743.19	ENST00000679699.1	2444	12	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_6	21.4691783688783	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGTCTCAAAAAAAAAAAAAA	12481973	True	NA	NA	False	AATAGA	-10	NA	12484420	12533653	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_141239.known	chr3	+	2149	12	FSM	ENSG00000154743.19	ENST00000402228.7	2149	12	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	33.8509128018826	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATGAAGACTTAAGTTGC	12482043	True	NA	32	True	AATAAA	-24	NA	12484490	12533317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_12484629_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_141244.known	chr3	+	2753	12	FSM	ENSG00000154743.19	ENST00000284995.11	2753	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	32.9622874918325	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	12482032	True	NA	NA	False	AATAGA	-15	NA	12484479	12533658	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_12484881_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_141245.known	chr3	+	2165	12	FSM	ENSG00000154743.19	ENST00000681471.1	2165	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	42.5703113091586	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTATGCTGTAAATGGAT	12482115	True	NA	1	True	AATAAA	-11	NA	12484562	12539618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_12484881_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661_12532774_12539160
transcript_141249.known	chr3	+	2373	11	FSM	ENSG00000154743.19	ENST00000679756.1	2373	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	35.6119362012233	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGTCCTGTCTCAAAAAAAA	12481987	True	NA	NA	False	AATAGA	-4	NA	12484434	12533647	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_141250.known	chr3	+	2358	11	FSM	ENSG00000154743.19	ENST00000415684.6	2358	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	29.9573029493645	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	12481987	True	NA	NA	False	AATAGA	-16	NA	12484434	12533659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_141253.known	chr3	+	2293	11	FSM	ENSG00000154743.19	ENST00000681676.1	2293	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	39.344631145812	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAATTGGTGAGAAAGTCA	12482057	True	NA	16	True	AATAAA	-8	NA	12484504	12533301	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_12484881_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_141257.known	chr3	+	2107	10	FSM	ENSG00000154743.19	ENST00000681433.1	2107	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	36.3606760860149	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTAGCACATGCCTGTAA	12481987	True	NA	NA	False	NA	NA	NA	12484434	12533520	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_141262.known	chr3	+	2353	9	FSM	ENSG00000154743.19	ENST00000680555.1	2353	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	49.1273854382665	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTGTGCCACTGCAATCC	12482115	True	NA	NA	False	NA	NA	NA	12484562	12533609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_12484881_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_141264.known	chr3	+	3855	9	FSM	ENSG00000075975.17	ENST00000677816.1	3855	9	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_8	70.267346612776	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTATTCTGCCCTCAAA	12554307	True	NA	NA	False	NA	NA	NA	12557056	12586208	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_12557177_12568874_12569004_12570070_12570253_12572068_12572374_12574791_12575007_12576630_12576742_12581807_12581953_12582115_12582343_12583787
transcript_141270.known	chr3	+	1679	8	FSM	ENSG00000075975.17	ENST00000448482.1	1679	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	68.4039621719117	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTCTTACCAAAGGAG	12554340	True	NA	-45	True	AGTAAA	-25	NA	12557089	12582626	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_12557177_12568874_12568998_12570070_12570253_12572068_12572374_12574791_12575007_12576630_12576742_12581807_12581953_12582115
transcript_141275.known	chr3	+	1436	7	FSM	ENSG00000075975.17	ENST00000411987.5	1436	7	0	0	0	0	multi-exon	FALSE	canonical	2	44	junction_1	56.1231285260859	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGGTAACAACTAACAAACA	12554337	True	NA	61	True	NA	NA	NA	12557086	12582503	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_12557177_12570070_12570253_12572068_12572374_12574791_12575007_12576630_12576742_12581807_12581953_12582115
transcript_141280.known	chr3	+	1587	6	FSM	ENSG00000154743.19	ENST00000490981.2	1587	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	40.5038269796818	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAGGAGTTCGAGACCAG	12482115	True	NA	NA	False	NA	NA	NA	12484562	12505574	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_12484881_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153
transcript_141283.known	chr3	+	2913	5	FSM	ENSG00000154743.19	ENST00000679537.1	2913	5	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	14.7372826531895	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAAACTCTGTCTCAAA	12481987	True	NA	NA	False	NA	NA	NA	12484434	12505766	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261
transcript_141286.known	chr3	+	4573	15	FSM	ENSG00000144712.12	ENST00000456430.6	4573	15	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_3	13.2472561656506	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTCCTCTGCACGACT	12795930	True	NA	11	True	AATAAA	-18	NA	12796679	12834803	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_12796789_12803487_12803632_12807305_12807461_12808209_12808334_12810058_12810325_12812989_12813096_12813245_12813389_12815140_12815434_12815866_12816009_12816373_12817877_12820085_12820182_12825469_12825640_12827439_12827605_12831464_12831573_12833754
transcript_141292.known	chr3	-	2094	4	FSM	ENSG00000144713.13	ENST00000429711.7	2094	4	0	0	0	0	multi-exon	FALSE	canonical	3	11844	junction_3	2364.05870391485	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACCGTTTTGAATTTTAA	-12641222	True	NA	-26	True	NA	NA	NA	12841565	12834484	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_12836224_12839348_12839531_12840141_12840243_12841493
transcript_141293.known	chr3	-	555	4	FSM	ENSG00000144713.13	ENST00000457131.1	555	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	7894.08894187431	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGTAGGCAGCTCATGTG	-12641201	True	NA	-87	True	AAGAAA	-1	NA	12841544	12836101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_12836224_12839348_12839531_12840141_12840342_12841493
transcript_141294.known	chr3	-	631	3	FSM	ENSG00000144713.13	ENST00000452606.2	631	3	0	0	0	0	multi-exon	FALSE	canonical	3	11844	junction_2	2779.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGTTTCCAAAATGTT	-12641200	True	NA	NA	False	NA	NA	NA	12841543	12839050	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_12839531_12840141_12840243_12841493
transcript_141295.known	chr3	-	620	4	FSM	ENSG00000144713.13	ENST00000435983.5	620	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	7897.85063587978	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTGGCATCTTCCTTCC	-12641202	True	NA	-35	True	AATAAA	-12	NA	12841545	12836049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_12836224_12839348_12839531_12840141_12840354_12841493
transcript_141296.known	chr3	-	1734	3	FSM	ENSG00000144713.13	ENST00000396953.6	1734	3	0	0	0	0	multi-exon	FALSE	canonical	3	16028	junction_1	687.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAAACTGCCATCTGGCA	-12641186	True	NA	-45	True	AATAAA	-2	NA	12841529	12836059	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_12836224_12839348_12839531_12840141
transcript_141304.known	chr3	-	7206	40	FSM	ENSG00000132182.12	ENST00000254508.7	7206	40	0	0	0	0	multi-exon	FALSE	non_canonical	3	201	junction_31	51.8838915132007	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGTGTGATCGTTGCTGA	-13415348	True	NA	-22	True	AATAAA	-20	NA	13420322	13316234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_13317782_13319071_13319156_13319229_13319326_13319762_13319980_13321584_13321836_13322192_13322340_13323308_13323433_13325794_13325932_13327216_13327438_13328770_13328947_13330459_13330635_13332292_13332385_13335453_13335613_13336786_13336919_13337836_13337918_13339853_13340034_13340235_13340299_13341747_13341884_13341995_13342124_13343174_13343304_13351878_13351981_13352079_13352185_13353553_13353661_13353914_13354108_13358221_13358396_13360269_13360492_13365945_13366092_13371833_13372033_13373717_13373874_13375503_13375642_13376290_13376432_13377455_13377563_13378911_13378981_13379562_13379722_13386274_13386408_13388302_13388454_13391210_13391308_13397356_13397489_13399724_13399862_13420059
transcript_141315.nnic	chr3	-	4504	21	NNC	ENSG00000132182.12	novel	7206	40	NA	NA	-6177	0	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_20	72.7526631814946	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGTGTGATCGTTGCTGA	-13347290	False	NA	-22	True	AATAAA	-20	NA	13347318	13316234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_13317782_13319071_13319156_13319229_13319326_13319762_13319980_13321584_13321836_13322192_13322340_13323308_13323433_13325794_13325932_13327216_13327438_13328770_13328947_13330459_13330635_13332292_13332385_13335453_13335613_13336786_13336919_13337836_13337918_13339853_13340034_13340235_13340299_13341747_13341884_13341995_13342124_13343174_13343304_13347089
transcript_141321.known	chr3	-	3134	20	FSM	ENSG00000132182.12	ENST00000420141.2	3134	20	0	0	0	0	multi-exon	FALSE	non_canonical	3	201	junction_11	25.6726678118223	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAAAAATTAGCTGGGCA	-13415335	True	NA	NA	False	AATATA	-35	NA	13420309	13351662	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_13351981_13352079_13352185_13353553_13353661_13353914_13354108_13358221_13358396_13360269_13360492_13365945_13366092_13371833_13372033_13373717_13373874_13375503_13375642_13376290_13376432_13377455_13377563_13378911_13378981_13379562_13379722_13386274_13386408_13388302_13388454_13391210_13391308_13397356_13397489_13399724_13399862_13420059
transcript_141335.known	chr3	+	2819	10	FSM	ENSG00000163517.15	ENST00000295757.8	2819	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	13.2506696779287	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGAGTCCTGTGGAGT	13479519	True	NA	11	True	AATAAA	-19	NA	13480305	13506416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_13480350_13481245_13481395_13483463_13483565_13496735_13496853_13498512_13498556_13500712_13500790_13501870_13501934_13502883_13502981_13504093_13504273_13504467
transcript_141338.nic	chr3	+	1788	10	NIC	ENSG00000163517.15	novel	2766	9	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	14.8332292963476	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCAGGCCCTTCTGTGG	13479565	True	NA	8	True	AATAAA	-18	NA	13480351	13505334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_13480447_13481245_13481395_13483463_13483565_13496735_13496853_13498512_13498556_13500712_13500790_13501870_13501934_13502883_13502981_13504093_13504273_13504467
transcript_141339.nic	chr3	+	2873	10	NIC	ENSG00000163517.15	novel	2819	10	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	14.8332292963476	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGAGTCCTGTGGAGT	13479562	True	NA	11	True	AATAAA	-19	NA	13480348	13506416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_13480447_13481245_13481395_13483463_13483565_13496735_13496853_13498512_13498556_13500712_13500790_13501870_13501934_13502883_13502981_13504093_13504273_13504467
transcript_141348.nic	chr3	+	2696	8	NIC	ENSG00000163517.15	novel	2819	10	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	19.8051735149981	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGAGTCCTGTGGAGT	NA	False	NA	11	True	AATAAA	-19	NA	13480268	13506416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_13480350_13481245_13481395_13483463_13483565_13500712_13500790_13501870_13501934_13502883_13502981_13504093_13504273_13504467
transcript_141349.nic	chr3	+	2710	8	NIC	ENSG00000163517.15	novel	1559	10	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	21.1119465164699	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGAGTCCTGTGGAGT	13479565	True	NA	11	True	AATAAA	-19	NA	13480351	13506416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_13480447_13481245_13481395_13483463_13483565_13500712_13500790_13501870_13501934_13502883_13502981_13504093_13504273_13504467
transcript_141354.known	chr3	+	1018	7	FSM	ENSG00000163517.15	ENST00000402271.5	1018	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	20.2813543269017	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGAAGGGCTTGAGGCCT	13479516	True	NA	NA	False	NA	NA	NA	13480302	13504849	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_13480350_13481245_13481395_13483463_13483565_13501870_13501934_13502883_13502981_13504093_13504273_13504467
transcript_141358.nic	chr3	+	2710	7	NIC	ENSG00000163517.15	novel	2819	10	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	21.8759126793731	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGAGTCCTGTGGAGT	NA	False	NA	11	True	AATAAA	-19	NA	13480274	13506416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_13480447_13481245_13481395_13483463_13483565_13501870_13501934_13502883_13502981_13504093_13504273_13504467
transcript_141359.known	chr3	+	967	6	FSM	ENSG00000163517.15	ENST00000404040.5	967	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	23.8713217061812	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAGGCAGAGCCTGTGTC	13479537	True	NA	NA	False	NA	NA	NA	13480323	13504882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_13480350_13481245_13481395_13483463_13483565_13502883_13502981_13504093_13504273_13504467
transcript_141361.known	chr3	+	1021	6	FSM	ENSG00000163517.15	ENST00000425430.5	1021	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	22.4267697183522	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGAGAATTGGAGAGGAC	13479519	True	NA	NA	False	NA	NA	NA	13480305	13504956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_13480350_13481245_13481395_13501870_13501934_13502883_13502981_13504093_13504273_13504467
transcript_141367.known	chr3	+	577	5	FSM	ENSG00000163517.15	ENST00000404548.5	577	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	25.8891869319992	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATCTGTTTGGCCTGGGGC	13479537	True	NA	NA	False	NA	NA	NA	13480323	13504589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_13480350_13481245_13481395_13483463_13483565_13504093_13504273_13504467
transcript_141369.known	chr3	+	576	5	FSM	ENSG00000163517.15	ENST00000405025.5	576	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	27.2304976083802	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGGGTACCAGAAGCGCACA	13479589	True	NA	NA	False	NA	NA	NA	13480375	13504543	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_13480447_13481245_13481395_13483463_13483565_13504093_13504273_13504467
transcript_141371.known	chr3	+	1000	4	FSM	ENSG00000163517.15	ENST00000402259.5	1000	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	24.5130350811336	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGACTAGGCCTGCATC	NA	False	NA	NA	False	NA	NA	NA	13480281	13505071	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_13480350_13481245_13481395_13504093_13504273_13504467
transcript_141378.known	chr3	+	4127	17	FSM	ENSG00000163520.14	ENST00000295760.11	4127	17	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	18.8181054771728	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTAAAGTGTTCAGAG	13548139	True	NA	24	True	TATAAA	-33	NA	13549180	13638422	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_13549209_13570314_13571662_13608061_13608174_13609512_13609643_13613983_13614165_13618075_13618286_13618903_13619018_13619729_13619832_13626444_13626580_13627831_13627970_13628904_13629049_13629163_13629293_13629819_13629946_13630698_13630816_13631328_13631458_13636444_13636569_13637561
transcript_141382.nnic	chr3	+	3998	16	NIC	ENSG00000163520.14	novel	4306	18	NA	NA	-24	0	intron_retention	FALSE	canonical	2	20	junction_8	29.2252554403816	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTCTTGGTCCCTTTACT	13548115	True	NA	6	True	TATAAA	-15	NA	13549156	13638404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_13549209_13570314_13571662_13608061_13608174_13609512_13609643_13613983_13614165_13618075_13618286_13618903_13619018_13619729_13619832_13627831_13627970_13628904_13629049_13629163_13629293_13629819_13629946_13630698_13630816_13631328_13631458_13636444_13636569_13637561
transcript_141385.known	chr3	-	1603	4	FSM	ENSG00000163528.13	ENST00000295767.9	1603	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	174.568038311714	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATGTGTCCTTTGTT	-14120064	True	NA	-1	True	ATTAAA	-23	NA	14124870	14112076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_14113195_14116425_14116525_14121916_14122087_14124654
transcript_141387.known	chr3	-	1433	3	FSM	ENSG00000163528.13	ENST00000396914.4	1433	3	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_2	0.5	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATGTGTCCTTTGTT	-14120064	True	NA	-1	True	ATTAAA	-23	NA	14124870	14112076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_14113195_14116425_14116525_14124654
transcript_141394.known	chr3	-	3650	16	FSM	ENSG00000154767.15	ENST00000285021.12	3650	16	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_8	24.007776517898	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGCTCTATATTTTCT	-14173598	True	NA	-11	True	AATAAA	-14	NA	14178601	14145146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_14146160_14147289_14147380_14147907_14148002_14148561_14148732_14148813_14148949_14152334_14152417_14156334_14156496_14158010_14158893_14159740_14159831_14164812_14164934_14165427_14165586_14167168_14167254_14168256_14168381_14170437_14170551_14172866_14173063_14178465
transcript_141407.known	chr3	-	2944	15	FSM	ENSG00000154767.15	ENST00000476581.6	2944	15	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_12	78.9766498687415	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGGTGAAGCCTTCAAAG	-14173598	True	NA	NA	False	NA	NA	NA	14178601	14145728	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_14146160_14147289_14147380_14147907_14148002_14148561_14148732_14148813_14148949_14152334_14152417_14156334_14156496_14158010_14158893_14159740_14159831_14164812_14164934_14165427_14165586_14167168_14167254_14170437_14170551_14172866_14173063_14178465
transcript_141409.nnic	chr3	-	3410	15	NIC	ENSG00000154767.15	novel	3650	16	NA	NA	-50	-149	combination_of_known_splicesites	FALSE	canonical	2	8	junction_6	81.2981411540389	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACGAATTGAAAATTAAGGA	-14173668	True	NA	NA	False	AAAAAG	-27	NA	14178671	14145295	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_14146160_14147289_14147380_14147907_14148002_14148561_14148732_14148813_14148949_14152334_14152417_14158010_14158893_14159740_14159831_14164812_14164934_14165427_14165586_14167168_14167254_14168256_14168381_14170437_14170551_14172866_14173063_14178465
transcript_141416.known	chr3	+	3230	12	FSM	ENSG00000170876.8	ENST00000306077.5	3230	12	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_9	20.5880491692399	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGTGTGGGACTTTAAC	14122105	True	NA	22	True	AATAAA	-14	NA	14125051	14143680	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_14125206_14129411_14129562_14130821_14130957_14131579_14131675_14132545_14132596_14132865_14132936_14133738_14133810_14134769_14134892_14135157_14135233_14135806_14135909_14139179_14139298_14141592
transcript_141432.known	chr3	-	557	4	FSM	ENSG00000154767.15	ENST00000511155.1	557	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	155.597772049174	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAGAGAAAGAAGGTAAGC	-14173618	True	NA	NA	False	NA	NA	NA	14178621	14168270	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_14168381_14170437_14170551_14172866_14173063_14178483
transcript_141433.nic	chr3	-	475	3	ISM	ENSG00000154767.15	ENST00000476581.6	2944	15	-70	24749	-50	-2207	5prime_fragment	FALSE	canonical	3	312	junction_2	7	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGGAAGAAAGTGAAAA	-14173668	True	NA	NA	False	AATGAA	-13	NA	14178671	14170477	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_14170551_14172866_14173063_14178465
transcript_141434.known	chr3	+	3359	4	FSM	ENSG00000170860.4	ENST00000306024.4	3359	4	0	0	0	0	multi-exon	FALSE	canonical	3	2520	junction_1	773.395543474791	819	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGTTGATGTTTCTCTG	14146216	True	NA	6	True	AATAAA	-33	NA	14178816	14201122	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_14178882_14181559_14181671_14183936_14184033_14198035
transcript_141439.known	chr3	+	6500	15	FSM	ENSG00000131389.18	ENST00000622186.5	6500	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	112.923759724002	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGTGGGTTGTGTTCTG	14385148	True	NA	22	True	AATAAA	-22	NA	14402605	14489349	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_14402848_14416411_14416454_14443623_14443864_14445716_14445852_14447581_14447817_14457949_14458083_14466515_14466651_14467852_14467957_14468087_14468213_14472204_14472318_14477204_14477343_14478465_14478569_14479084_14479186_14481670_14481842_14484866
transcript_141450.nnic	chr3	+	2589	6	NNC	ENSG00000131389.18	novel	1116	7	NA	NA	-8	-1438	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	164.924952629977	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTCTAGCCTGGTGTGTGT	14385110	True	NA	NA	False	AATAAA	-15	NA	14402567	14456588	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_14402848_14416411_14416454_14443623_14443864_14445716_14445852_14447581_14447817_14454931
transcript_141451.known	chr3	+	1252	5	FSM	ENSG00000131389.18	ENST00000621751.4	1252	5	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_2	32.7671710710583	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCATATATGAAGCTGAAGT	14385162	True	NA	107	True	AATATA	-24	NA	14402619	14448188	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_14402848_14416411_14416454_14443623_14443864_14445716_14445852_14447581
transcript_141454.known	chr3	+	988	3	FSM	ENSG00000131389.18	ENST00000613930.4	988	3	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_2	15.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGTATCCAGGAATAAAA	14385163	True	NA	NA	False	NA	NA	NA	14402620	14444342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_14402848_14416411_14416454_14443623
transcript_141455.nic	chr3	+	1233	2	ISM	ENSG00000131389.18	ENST00000613930.4	988	3	-223	27148	-178	5871	5prime_fragment	FALSE	canonical	3	406	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTATAAATAAACAAGTAAAA	NA	False	NA	NA	False	AATAAA	-2	NA	14402397	14417194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_14402848_14416411
transcript_141458.known	chr3	+	2940	11	FSM	ENSG00000154781.17	ENST00000383794.7	2940	11	0	0	0	0	multi-exon	TRUE	canonical	3	124	junction_7	28.3788653754867	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCCAGCTGCCTTTTTT	14649700	True	NA	7	True	AATAAA	-17	NA	14651761	14672655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_14651879_14654425_14654531_14655528_14655630_14658870_14658930_14661529_14661708_14665027_14665124_14666804_14666948_14667423_14667519_14668048_14668182_14669933_14670087_14670895
transcript_141463.nic	chr3	+	937	9	ISM	ENSG00000154781.17	ENST00000383794.7	2940	11	-22	4586	-22	771	5prime_fragment	FALSE	canonical	3	124	junction_7	30.4156107122642	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CGAGAAAACATAAAGGAAAA	14649678	True	NA	NA	False	NA	NA	NA	14651739	14668069	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_14651879_14654425_14654531_14655528_14655630_14658870_14658930_14661529_14661708_14665027_14665124_14666804_14666948_14667423_14667519_14668048
transcript_141464.nic	chr3	+	1015	9	ISM	ENSG00000154781.17	ENST00000383794.7	2940	11	-22	4508	-22	849	5prime_fragment	FALSE	canonical	3	124	junction_7	30.4156107122642	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAAGAAGGTGGAACAGA	14649678	True	NA	NA	False	AAAAAG	-10	NA	14651739	14668147	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_14651879_14654425_14654531_14655528_14655630_14658870_14658930_14661529_14661708_14665027_14665124_14666804_14666948_14667423_14667519_14668048
transcript_141466.known	chr3	+	1139	7	FSM	ENSG00000154781.17	ENST00000465759.1	1139	7	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_5	13.832329280831	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTTTTTAAAACTTGT	14649711	True	NA	NA	False	NA	NA	NA	14651772	14667298	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_14651879_14654425_14654531_14655528_14655630_14658870_14658930_14661529_14661708_14665027_14665124_14666804
transcript_141467.known	chr3	+	2720	13	NNC	ENSG00000154781.17	novel	2940	11	NA	NA	-16	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	95.6251361654804	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAACCCAGCTGCCTTTT	14649684	True	NA	5	True	AATAAA	-15	NA	14651745	14672653	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_14651879_14654425_14654531_14655528_14655630_14658870_14658930_14661529_14661640_14661643_14661668_14661668_14661699_14661841_14661847_14665022_14665054_14665055_14665124_14666804_14666948_14669933_14670087_14670895
transcript_141473.known	chr3	+	2682	2	FSM	ENSG00000154783.12	ENST00000640506.1	2682	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGCAGCTGTAACTGTCCA	14810832	False	NA	NA	False	NA	NA	NA	14810852	14821624	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_14810866_14818955
transcript_141480.known	chr3	+	2406	15	FSM	ENSG00000177463.16	ENST00000323373.10	2406	15	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	11.2832275741383	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTATGTGTGTATATATAT	14947716	False	NA	13	True	ATTAAA	-25	NA	14947728	15043349	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_14947907_15003875_15003987_15004556_15004614_15013588_15013790_15016151_15016255_15020752_15020933_15023199_15023348_15024114_15024209_15028585_15028720_15030274_15030453_15032378_15032501_15034669_15034810_15037999_15038138_15039121_15039228_15042833
transcript_141483.known	chr3	+	2494	14	FSM	ENSG00000177463.16	ENST00000425241.6	8419	14	1	5924	0	0	multi-exon	FALSE	canonical	3	25	junction_2	7.86799373689297	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTATGTGTGTATATATAT	14945361	True	NA	13	True	ATTAAA	-25	NA	14947583	15043349	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_14947907_15003875_15003987_15013588_15013790_15016151_15016255_15020752_15020933_15023199_15023348_15024114_15024209_15028585_15028720_15030274_15030453_15032378_15032501_15034669_15034810_15037999_15038138_15039121_15039228_15042833
transcript_141498.known	chr3	-	3818	2	FSM	ENSG00000225733.7	ENST00000655923.1	3818	2	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCACGTAATTGCTGTTAG	-14947378	False	NA	-18	True	AATAAA	-9	NA	14947538	14942788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_14946155_14947086
transcript_141499.known	chr3	-	1527	2	FSM	ENSG00000225733.7	ENST00000440079.1	1527	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTTGTGGTTGTGTACT	-14943378	True	NA	-3	True	NA	NA	NA	14947505	14945023	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_14946155_14947109
transcript_1415.known	chr1	-	727	4	FSM	ENSG00000162585.17	ENST00000378546.9	727	4	0	0	0	0	multi-exon	FALSE	canonical	3	1044	junction_3	132.290085292386	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCTGCCGCTTTTCTTTCT	-2181869	True	NA	-5	True	ATTAAA	-40	NA	2194772	2189547	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_2189782_2193638_2193911_2193997_2194134_2194687
transcript_141500.known	chr3	-	1874	2	FSM	ENSG00000225733.7	ENST00000426200.1	1874	2	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGTTGGGG	-14948264	True	NA	NA	False	NA	NA	NA	14948424	14944692	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_14946155_14948012
transcript_141517.known	chr3	-	1119	4	FSM	ENSG00000131368.8	ENST00000449354.6	1119	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	340.917389797978	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATGCCACATTGAAACA	-15049653	True	NA	NA	False	TATAAA	-32	NA	15065260	15049211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_15049936_15053379_15053468_15059368_15059476_15065060
transcript_141519.known	chr3	-	4572	4	FSM	ENSG00000131368.8	ENST00000253686.7	4572	4	0	0	0	0	multi-exon	FALSE	canonical	3	677	junction_2	40.0860186210715	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGCATGTATAAATATCA	-15049708	True	NA	NA	False	AATAAA	-21	NA	15065315	15048511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_15052634_15053379_15053468_15059368_15059476_15065060
transcript_141520.known	chr3	-	723	4	FSM	ENSG00000131368.8	ENST00000447299.1	723	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	343.259215300753	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCACTGTGGGCTGGGGT	-15049693	True	NA	NA	False	NA	NA	NA	15065300	15052434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_15052634_15053290_15053468_15059368_15059476_15065060
transcript_141531.known	chr3	-	1281	3	FSM	ENSG00000131368.8	ENST00000444840.6	1281	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	381	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGACATTGGGGCCCTG	-15049710	True	NA	NA	False	NA	NA	NA	15065317	15051716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_15052634_15059368_15059476_15065060
transcript_141532.nic	chr3	-	735	2	ISM	ENSG00000131368.8	ENST00000447299.1	723	4	-39	6585	-22	-6585	5prime_fragment	FALSE	canonical	3	772	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCAGGGCTCAGTATGG	-15049732	True	NA	NA	False	NA	NA	NA	15065339	15059019	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_15059476_15065060
transcript_141539.known	chr3	-	6678	14	FSM	ENSG00000131381.12	ENST00000253699.7	6678	14	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_12	16.7579355043175	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGGGGTGTGTGTGTCTG	-15096854	True	NA	-8	True	AATAAA	-14	NA	15099148	15070072	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_15074931_15075605_15075711_15077061_15077165_15078074_15078162_15080731_15080803_15082366_15082609_15084734_15084897_15084999_15085046_15085860_15085962_15090398_15090540_15095972_15096289_15096534_15096711_15098118_15098275_15099034
transcript_141543.known	chr3	-	3005	13	FSM	ENSG00000131381.12	ENST00000476527.6	3005	13	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_12	12.4498995979887	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAAAATAGAAACTAG	-15096869	True	NA	-36	True	NA	NA	NA	15099163	15073604	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_15074931_15075605_15075711_15077061_15077165_15078074_15078162_15080731_15080803_15082366_15082609_15084734_15084897_15084999_15085046_15085860_15085962_15090398_15090540_15095972_15096289_15096534_15096711_15099034
transcript_141545.nic	chr3	-	1816	13	ISM	ENSG00000131381.12	ENST00000253699.7	6678	14	-37	5574	-22	-742	5prime_fragment	FALSE	canonical	3	46	junction_11	17.3034598338662	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGGAGGAAATGGAGAGG	-15096891	True	NA	NA	False	AAAAAG	-5	NA	15099185	15075646	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_15075711_15077061_15077165_15078074_15078162_15080731_15080803_15082366_15082609_15084734_15084897_15084999_15085046_15085860_15085962_15090398_15090540_15095972_15096289_15096534_15096711_15098118_15098275_15099034
transcript_141551.known	chr3	-	582	3	FSM	ENSG00000131381.12	ENST00000507357.1	582	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	46.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTGATGTCAAAGGGCAAAT	-15096842	True	NA	NA	False	NA	NA	NA	15099136	15095997	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_15096289_15096534_15096711_15099021
transcript_141554.known	chr3	+	4348	21	FSM	ENSG00000131375.10	ENST00000253693.7	4348	21	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_15	27.8701901679913	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTGTACTTCTTACAAT	15204209	True	NA	NA	False	AATAAA	-13	NA	15206245	15252916	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_15206598_15212103_15212213_15217424_15217583_15218472_15218541_15220780_15220982_15223474_15223562_15227838_15227966_15228973_15229060_15230441_15230536_15232518_15232666_15233866_15233974_15235024_15235146_15240472_15240618_15240753_15240854_15241452_15241589_15242177_15242254_15245525_15245672_15246731_15246795_15247326_15247458_15250930_15251024_15251115
transcript_141560.nnic	chr3	+	3551	19	NIC	ENSG00000131375.10	novel	4348	21	NA	NA	-5	0	combination_of_known_splicesites	TRUE	canonical	3	60	junction_14	25.5019365035697	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTGCATAGTTTAAGTTA	15204110	True	NA	6	True	AATAAA	-17	NA	15206146	15252302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_15206598_15212103_15212213_15217424_15217583_15218472_15218541_15220780_15220982_15223474_15223562_15227838_15227966_15228973_15229060_15230441_15230536_15232518_15232666_15233866_15233974_15235024_15235146_15240472_15240618_15240753_15240854_15242177_15242254_15246731_15246795_15247326_15247458_15250930_15251024_15251115
transcript_141562.nic	chr3	+	425	2	ISM	ENSG00000131375.10	ENST00000253693.7	4348	21	-20	40760	5	-5373	5prime_fragment	FALSE	canonical	3	143	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATTCAAGAAAAAATAACTG	15204189	True	NA	NA	False	NA	NA	NA	15206225	15212156	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_15206598_15212103
transcript_141563.known	chr3	-	3279	9	FSM	ENSG00000131370.16	ENST00000383791.8	3279	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	4.02919036532155	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGGTTGGCCAATCAT	-15331887	True	NA	NA	False	ATTAAA	-19	NA	15332586	15254352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_15256304_15256852_15257114_15258830_15259051_15259760_15259804_15262158_15262290_15269712_15269878_15304102_15304232_15330503_15330567_15332270
transcript_141575.known	chr3	-	4020	7	FSM	ENSG00000206562.12	ENST00000443029.5	4020	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	85.8286406484197	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTGTCTCTTGACTTAT	-15424917	True	NA	1	True	AATAAA	-21	NA	15427518	15381274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_15384188_15411244_15411438_15414020_15414163_15415771_15415943_15424954_15425090_15426286_15426636_15427401
transcript_141581.known	chr3	+	4447	6	FSM	ENSG00000144597.14	ENST00000396842.7	4447	6	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_4	3.49857113690718	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTCTTGGTGGGTTT	15425410	True	NA	10	True	AATAAA	-20	NA	15427597	15442613	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_15427883_15429912_15430008_15432086_15432224_15434347_15434539_15436341_15436576_15439108
transcript_141582.known	chr3	-	2618	6	FSM	ENSG00000206562.12	ENST00000383790.8	2618	6	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	66.5023307862213	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGCTCCATATCTGAT	-15424943	True	NA	NA	False	NA	NA	NA	15427544	15409759	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_15411438_15414020_15414163_15415771_15415943_15424954_15425090_15426286_15426636_15427401
transcript_141586.nic	chr3	-	1163	6	NIC	ENSG00000206562.12	novel	615	4	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	106	junction_1	53.2743840884153	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTTGAGATTACTTTCC	-15424945	True	NA	-37	True	AATAAA	-18	NA	15427546	15413668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_15413946_15415497_15415584_15415771_15415943_15424954_15425090_15426286_15426636_15427401
transcript_141587.known	chr3	+	1037	5	FSM	ENSG00000144597.14	ENST00000449565.1	1037	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	30.4168949763121	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGAACAATCTCATCTT	15425410	True	NA	NA	False	NA	NA	NA	15427597	15439340	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_15427883_15429912_15430008_15434347_15434539_15436341_15436576_15439108
transcript_141589.known	chr3	-	615	4	FSM	ENSG00000206562.12	ENST00000453819.5	615	4	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	55.1180551180827	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTTGAGATTACTTTCC	-15422434	False	NA	-37	True	AATAAA	-18	NA	15425035	15413668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_15413946_15415497_15415584_15415771_15415943_15424954
transcript_141590.known	chr3	-	2960	17	FSM	ENSG00000206561.14	ENST00000383788.10	2960	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	2.64501299618735	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGCTCTCTCTTCCGTT	-15521688	False	NA	-1	True	AATAAA	-26	NA	15521706	15450132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_15451714_15453828_15453932_15455898_15456020_15456459_15456580_15458185_15458326_15466340_15466438_15470535_15470617_15473999_15474036_15474227_15474273_15474924_15474952_15475424_15475488_15477125_15477198_15478976_15479004_15479337_15479383_15488205_15488308_15489524_15489638_15521519
transcript_141592.known	chr3	+	2083	4	FSM	ENSG00000169814.16	ENST00000449107.7	2083	4	0	0	0	0	multi-exon	FALSE	canonical	1	64	junction_2	9.67241208569794	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGCAGGAGCCCACTTCT	NA	False	NA	NA	False	NA	NA	NA	15601369	15645582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_15601771_15635423_15635689_15641907_15642058_15644315
transcript_141594.known	chr3	+	2069	4	FSM	ENSG00000169814.16	ENST00000672065.1	2069	4	0	0	0	0	multi-exon	FALSE	canonical	1	64	junction_2	22.2910046630673	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCAGTGGCTTGGGGTTT	15599627	True	NA	21	True	AATAAA	-27	NA	15601744	15645819	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_15601895_15635423_15635689_15641907_15642058_15644315
transcript_141597.nic	chr3	+	643	3	ISM	ENSG00000169814.16	ENST00000449107.7	2083	4	356	3342	0	0	5prime_fragment	FALSE	canonical	1	64	junction_2	10.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGTTATTCATCTATGGA	15599608	True	NA	19	True	ATTAAA	-19	NA	15601725	15642240	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_15601771_15635423_15635689_15641907
transcript_141598.known	chr3	+	760	3	FSM	ENSG00000169814.16	ENST00000417015.3	760	3	0	0	0	0	multi-exon	FALSE	canonical	1	64	junction_2	27	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGGATCTTTCCATTTA	15599627	True	NA	31	True	ATTAAA	-31	NA	15601744	15642252	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_15601895_15635423_15635689_15641907
transcript_1416.nnic	chr1	-	710	4	NNC	ENSG00000162585.17	novel	727	4	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	94	junction_2	540.304235284776	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCTGCCGCTTTTCTTTCT	-2181882	True	NA	-5	True	ATTAAA	-40	NA	2194785	2189547	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_2189782_2193638_2193911_2194027_2194134_2194687
transcript_14160.known	chr1	-	5728	28	FSM	ENSG00000198837.10	ENST00000361217.9	5728	28	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_27	52.6634108489913	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGGCCTCCTGTTCCCTG	-153943453	True	NA	-4	True	AGTAAA	-20	NA	153946718	153929500	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153930443_153930538_153930604_153930691_153930858_153930946_153931065_153932203_153932441_153932641_153932778_153932860_153933031_153933196_153933320_153933482_153933872_153934134_153934303_153934759_153934965_153936059_153936189_153936541_153936749_153937487_153937615_153937723_153937864_153938899_153939046_153939588_153939805_153940155_153940257_153940430_153940607_153940903_153941049_153941230_153941290_153941373_153941441_153941868_153942114_153942186_153942357_153942555_153942626_153942877_153943131_153944057_153944398_153946300
transcript_141600.known	chr3	+	2192	5	FSM	ENSG00000169814.16	ENST00000646371.1	2192	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	36.037307058103	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTATATTTTACACATCC	15599634	True	NA	-1	True	AATAAA	-5	NA	15601751	15645797	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_15601771_15632590_15632867_15635423_15635689_15641907_15642058_15644315
transcript_141603.known	chr3	-	2009	17	FSM	ENSG00000131373.15	ENST00000321169.10	2009	17	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_12	21.5547993495648	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACAGAAAAAGTTATTCT	-15596573	True	NA	NA	False	ATTAAA	-21	NA	15601569	15560698	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_15560898_15563357_15563545_15564550_15564659_15567843_15568003_15568431_15568587_15571667_15571770_15573158_15573243_15574976_15575083_15579909_15580046_15582876_15582990_15585247_15585343_15586524_15586603_15589539_15589613_15591599_15591681_15596383_15596425_15601089_15601195_15601382
transcript_141606.known	chr3	-	1880	16	FSM	ENSG00000131373.15	ENST00000456194.6	1880	16	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_13	62.5223871016525	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTTTACAGTAAAGGAAT	-15596573	True	NA	70	True	AATAAA	-17	NA	15601569	15560746	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_15560898_15563357_15563545_15564550_15564659_15567843_15568003_15568431_15568587_15571667_15571770_15573158_15573243_15574976_15575083_15579909_15580046_15582876_15582990_15585247_15585343_15586524_15586603_15589539_15589613_15596383_15596425_15601089_15601195_15601382
transcript_141613.known	chr3	-	1637	14	FSM	ENSG00000131373.15	ENST00000422591.5	1637	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	74.2008309495889	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATACAGTTGCTAAGCA	-15596573	True	NA	NA	False	NA	NA	NA	15601569	15563357	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_15563545_15564550_15564659_15567843_15568003_15568431_15568587_15571667_15571770_15573158_15573243_15574976_15575083_15579909_15580046_15582876_15582990_15589539_15589613_15591599_15591681_15596383_15596425_15601089_15601195_15601382
transcript_141616.known	chr3	-	6564	28	FSM	ENSG00000206560.12	ENST00000399451.6	6564	28	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_27	26.4415394192303	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGTCTGTCTCTTTTA	-15859760	False	NA	NA	False	AATAAA	-19	NA	15859771	15667235	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_15670557_15675897_15675990_15676973_15677057_15677479_15677563_15678208_15678355_15679300_15679385_15679475_15679564_15685225_15685446_15686001_15686120_15686221_15686310_15690018_15690221_15694738_15694814_15695187_15695215_15696133_15696246_15707923_15708065_15709667_15709737_15711210_15711275_15712139_15712223_15713526_15713642_15714577_15714657_15720914_15721128_15724381_15724525_15735409_15735498_15737032_15737234_15751749_15751821_15766233_15766313_15795222_15795307_15859376
transcript_141624.known	chr3	-	4019	3	FSM	ENSG00000154813.10	ENST00000488423.2	4019	3	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_2	2	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGCGCCTGGGGAGTTC	-16258331	True	NA	1	True	AATAAA	-19	NA	16264943	16257060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_16260830_16264154_16264230_16264768
transcript_141628.known	chr3	-	3052	2	FSM	ENSG00000154813.10	ENST00000383775.4	3052	2	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCTTTTATGTAGTTTT	-16258357	True	NA	0	True	AATAAA	-40	NA	16264969	16257978	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_16260830_16264768
transcript_141630.known	chr3	-	2986	10	FSM	ENSG00000131378.14	ENST00000334133.9	2986	10	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_4	4.08248290463863	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGAGTGTTTATCGTGT	-16513503	True	NA	0	True	AATAAA	-26	NA	16513699	16315844	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_16317233_16323375_16323458_16326772_16326877_16357931_16358048_16370075_16370280_16377717_16378103_16409374_16409484_16433850_16434038_16493724_16493878_16513441
transcript_141640.known	chr3	+	1643	10	FSM	ENSG00000154814.14	ENST00000435829.6	1643	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	59.9650103738489	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTTAACTCACTAAGCT	16263074	True	NA	NA	False	NA	NA	NA	16265209	16337315	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_16265506_16269125_16269276_16270928_16271072_16271658_16271723_16286341_16286449_16294855_16294998_16301625_16301869_16302639_16302749_16303407_16303593_16337111
transcript_141644.known	chr3	+	3916	9	FSM	ENSG00000154814.14	ENST00000285083.10	3916	9	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_2	19.4867743610891	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGGCTCTATGAGTTT	16263076	True	NA	3	True	ATTAAA	-16	NA	16265211	16306087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_16265506_16269125_16269276_16270944_16271072_16271658_16271723_16286341_16286449_16294855_16294998_16301625_16301869_16302639_16302749_16303407
transcript_141648.known	chr3	+	960	6	FSM	ENSG00000154814.14	ENST00000452581.5	960	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	62.0303151692783	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGCAAACAAAAGAAATGGAT	16263097	True	NA	NA	False	NA	NA	NA	16265232	16301786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_16265506_16269125_16269276_16270944_16271072_16286341_16286449_16294855_16294998_16301625
transcript_141653.known	chr3	-	2974	11	FSM	ENSG00000092345.14	ENST00000399444.7	2974	11	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_10	4.41021541423999	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTTAGCATTCTGATG	-16605383	True	NA	-3	True	AATAAA	-23	NA	16605423	16586791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_16588714_16592049_16592149_16593654_16593769_16594532_16594584_16595313_16595386_16596749_16596890_16596987_16597052_16597489_16597542_16598086_16598179_16598451_16598599_16605202
transcript_141656.known	chr3	+	4161	6	FSM	ENSG00000154822.18	ENST00000615277.5	4161	6	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	11.9431989014669	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAGTACATGTGTTTAAT	16884632	True	NA	24	True	ATTAAA	-26	NA	16884954	17090604	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_16885367_17009673_17012161_17014707_17014912_17042873_17042950_17067955_17068066_17089732
transcript_141657.nnic	chr3	+	404	2	Intergenic	novelGene_2	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGAAGAAGCGGCCGAGGC	16883272	True	NA	NA	False	ATTAAA	-12	NA	16884224	16884913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Intergenic_chr3_+_16884537_16884821
transcript_141668.nic	chr3	-	3361	22	NIC	ENSG00000131374.14	novel	7854	22	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	2	36	junction_20	15.5322793137476	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCATTACTGACCTCTCAA	-17742710	False	NA	NA	False	AAAAAG	-7	NA	17742762	17160371	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_17161257_17166766_17166929_17167748_17167829_17185108_17185209_17214206_17214371_17238162_17238420_17258505_17258592_17291894_17292002_17307991_17308135_17372074_17372248_17374470_17374541_17374628_17374680_17376524_17376614_17383912_17384016_17403180_17403249_17404693_17404769_17404871_17404962_17406417_17406527_17428449_17428520_17508473_17508606_17623848_17623914_17742480
transcript_141669.known	chr3	-	3156	22	FSM	ENSG00000131374.14	ENST00000429383.8	3156	22	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_21	24.5141451137419	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCATTACTGACCTCTCAA	-17742446	False	NA	NA	False	AAAAAG	-7	NA	17742498	17160371	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_17161257_17166766_17166929_17167748_17167829_17185108_17185209_17214206_17214371_17238162_17238420_17258505_17258592_17291894_17292002_17307991_17308135_17372074_17372248_17374470_17374541_17374628_17374680_17376524_17376614_17383912_17384016_17403180_17403249_17404693_17404769_17404871_17404962_17406417_17406527_17428449_17428520_17508473_17508606_17562018_17562143_17742480
transcript_141685.known	chr3	-	4589	12	FSM	ENSG00000182568.17	ENST00000417717.6	4589	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	24.0986265511728	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTAGGGTTTGTCTGC	-18424549	False	NA	-6	True	ATTAAA	-18	NA	18424573	18347939	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_18349683_18351312_18351409_18351991_18352196_18378169_18378326_18386398_18386612_18394461_18394917_18397178_18397291_18415110_18415235_18416006_18416134_18416901_18417079_18420756_18420992_18423626
transcript_141687.known	chr3	-	7822	11	FSM	ENSG00000182568.17	ENST00000338745.11	7822	11	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	7.66093989011792	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAGCCACATTTTTAAGA	-18424289	True	NA	-4	True	AATAAA	-26	NA	18425339	18345376	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_18349683_18351991_18352196_18378169_18378326_18386398_18386612_18394461_18394917_18397178_18397291_18415110_18415235_18416006_18416134_18416901_18417079_18420756_18420992_18423626
transcript_141688.nic	chr3	-	4128	11	NIC	ENSG00000182568.17	novel	3755	11	NA	NA	-305	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_10	17.6422787643774	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTAGGGTTTGTCTGC	-18445146	True	NA	-6	True	ATTAAA	-18	NA	18445188	18347939	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_18349683_18351991_18352196_18378169_18378326_18386398_18386612_18394461_18394917_18397178_18397291_18415110_18415235_18416006_18416134_18416901_18417079_18420756_18420992_18444606
transcript_141693.nic	chr3	-	3341	11	NIC	ENSG00000182568.17	novel	7822	11	NA	NA	-305	158	combination_of_known_junctions	FALSE	canonical	3	11	junction_10	17.6422787643774	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTGTTACTCTATTGTA	-18445146	True	NA	27	True	AAAAAG	-9	NA	18445188	18348726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_18349683_18351991_18352196_18378169_18378326_18386398_18386612_18394461_18394917_18397178_18397291_18415110_18415235_18416006_18416134_18416901_18417079_18420756_18420992_18444606
transcript_141696.known	chr3	+	1131	5	FSM	ENSG00000228956.9	ENST00000598149.6	1131	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	6.06217782649107	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTCCTATTTATTGTTT	18445226	True	NA	NA	False	AATAAA	-19	NA	18445236	18469714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_18445443_18463479_18463546_18464286_18464340_18465962_18466040_18468985
transcript_141697.known	chr3	-	2860	13	FSM	ENSG00000163576.18	ENST00000295824.14	2860	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	2.05986784905138	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTGTTTTCCATAAAGC	-19934124	True	NA	NA	False	AATAAA	-21	NA	19934217	19879471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_19879805_19882549_19882732_19884402_19884616_19888443_19888652_19896686_19896842_19898777_19898846_19899431_19899516_19905619_19905750_19915302_19915414_19918231_19918413_19919832_19919977_19920504_19920568_19933229
transcript_141700.nnic	chr3	+	2430	7	NNC	ENSG00000144566.11	novel	2518	6	NA	NA	-65	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	3	junction_1	349.665395612561	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATCGGCTTTTCTCTTTTC	NA	False	NA	15	True	AATAAA	-17	NA	19947031	19985175	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_19947264_19947416_19947522_19950805_19951062_19975600_19975753_19976046_19976170_19978309_19978404_19983707
transcript_141705.known	chr3	+	2518	6	FSM	ENSG00000144566.11	ENST00000273047.9	2518	6	0	0	0	0	multi-exon	FALSE	canonical	3	835	junction_4	58.6153563496802	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATCGGCTTTTCTCTTTTC	19931592	True	NA	15	True	AATAAA	-17	NA	19947096	19985175	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_19947522_19950805_19951062_19975600_19975753_19976046_19976170_19978309_19978404_19983707
transcript_141706.known	chr3	+	1443	6	FSM	ENSG00000144566.11	ENST00000422242.1	1443	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	374.684614042264	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCATCTTGTTTTAGGAAT	19946595	False	NA	-50	True	TTTAAA	-22	NA	19947404	19984450	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_19947522_19950805_19951062_19975642_19975753_19976046_19976170_19978309_19978404_19983707
transcript_141707.known	chr3	+	622	4	FSM	ENSG00000144566.11	ENST00000412966.5	622	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	458.859455607052	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTGTAATAGCTTTATC	19946569	True	NA	NA	False	NA	NA	NA	19947378	19976103	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_19947522_19950805_19951062_19975586_19975753_19976046
transcript_141710.known	chr3	+	532	2	FSM	ENSG00000144566.11	ENST00000476544.1	532	2	0	0	0	0	multi-exon	FALSE	canonical	3	944	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATGTGTTTTTATATTT	19947393	False	NA	NA	False	TTTAAA	-22	NA	19947409	19951225	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_19947522_19950805
transcript_141713.known	chr3	-	1075	8	FSM	ENSG00000129810.15	ENST00000417364.1	1075	8	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	70.7161615912804	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTGTAAGAGTACACAAAC	-20179665	True	NA	NA	False	TTTAAA	-37	NA	20186127	20170643	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_20170816_20171042_20171233_20175004_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20185947
transcript_141714.known	chr3	-	1187	8	FSM	ENSG00000129810.15	ENST00000437051.5	1187	8	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	72.4557570845401	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCTTAAGCATTATCAT	-20179729	True	NA	-15	True	AATAAA	-33	NA	20186191	20170484	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_20170816_20171042_20171233_20175004_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20186058
transcript_141715.known	chr3	-	3070	8	FSM	ENSG00000129810.15	ENST00000412997.6	3070	8	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_3	45.4182378184206	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTGCTTTCCTTCTATT	-20179744	True	NA	-3	True	AATAAA	-15	NA	20186206	20169483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_20170816_20171042_20171233_20174248_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20185947
transcript_141720.known	chr3	-	2266	7	FSM	ENSG00000129810.15	ENST00000442720.5	2266	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	71.5471872263334	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTTTCCTTCTATTCTT	-20179744	True	NA	0	True	AATAAA	-18	NA	20186206	20169480	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_20170816_20171042_20171233_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20185947
transcript_141729.nic	chr3	-	1324	6	ISM	ENSG00000129810.15	ENST00000417364.1	1075	8	-182	3932	-103	146	5prime_fragment	FALSE	canonical	3	139	junction_1	48.054136138318	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTTCCCCAAAAAAAAATG	-20179847	False	NA	99	True	AATAAA	-17	NA	20186309	20174575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20185947
transcript_141730.nic	chr3	-	1155	6	ISM	ENSG00000129810.15	ENST00000437051.5	1187	8	-60	4091	-45	146	5prime_fragment	FALSE	canonical	3	122	junction_5	52.6444678954969	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTTCCCCAAAAAAAAATG	-20179789	True	NA	99	True	AATAAA	-17	NA	20186251	20174575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20186058
transcript_141733.nic	chr3	-	1260	6	ISM	ENSG00000129810.15	ENST00000417364.1	1075	8	-182	3996	-103	82	5prime_fragment	FALSE	canonical	3	139	junction_1	48.054136138318	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCTAACAGGAGAAAATCAAA	-20179847	False	NA	35	True	AAAAAG	-17	NA	20186309	20174639	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20185947
transcript_141734.nic	chr3	-	1091	6	ISM	ENSG00000129810.15	ENST00000437051.5	1187	8	-60	4155	-45	82	5prime_fragment	FALSE	canonical	3	122	junction_5	52.6444678954969	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCTAACAGGAGAAAATCAAA	-20179789	True	NA	35	True	AAAAAG	-17	NA	20186251	20174639	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20186058
transcript_141737.nic	chr3	-	455	2	ISM	ENSG00000129810.15	ENST00000417364.1	1075	8	-182	13298	-103	-9220	5prime_fragment	FALSE	canonical	3	140	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGCAGAGATTGGCAAAC	-20179847	False	NA	NA	False	AATAAA	-3	NA	20186309	20183941	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_20184035_20185947
transcript_141738.nic	chr3	-	259	2	ISM	ENSG00000129810.15	ENST00000437051.5	1187	8	-60	13484	-45	-9247	5prime_fragment	FALSE	canonical	3	122	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCGAATGAAAGAGAAAAGGA	-20179789	True	NA	NA	False	CATAAA	-4	NA	20186251	20183968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_20184035_20186058
transcript_141739.known	chr3	-	10478	8	FSM	ENSG00000151789.12	ENST00000281523.8	10478	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	9.64682458064808	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGGATGATGCTTGTTC	-21750568	True	NA	NA	False	ATTAAA	-32	NA	21751210	21412217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_21421448_21423962_21424065_21425491_21425671_21436969_21437204_21510860_21511024_21564573_21564685_21664885_21665029_21750894
transcript_141746.known	chr3	+	1248	6	FSM	ENSG00000182247.10	ENST00000425792.5	1248	6	0	0	0	0	multi-exon	FALSE	canonical	3	668	junction_5	58.1377674149945	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTTATGTGATCTTT	23194014	True	NA	NA	False	NA	NA	NA	23203019	23590222	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_23203263_23208691_23208876_23217261_23217313_23499607_23499741_23532553_23532702_23589733
transcript_141748.known	chr3	+	5231	8	FSM	ENSG00000174738.13	ENST00000312521.9	5231	8	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_5	12.2524466527952	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTGTTTGGTGTCTAA	23943882	True	NA	5	True	AATAAA	-14	NA	23945285	23980617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_23945595_23954536_23954804_23956036_23956126_23959670_23959816_23961976_23962606_23964976_23965163_23967812_23968024_23977222
transcript_141751.known	chr3	+	1783	6	FSM	ENSG00000170142.12	ENST00000306627.8	1783	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	38.7432574779148	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGCAGTACATGTCCTG	23793854	True	NA	NA	False	GATAAA	-24	NA	23805954	23891640	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_23806089_23807236_23807422_23811459_23811511_23887566_23887700_23889111_23889260_23890508
transcript_141754.known	chr3	+	1398	5	FSM	ENSG00000170142.12	ENST00000346855.7	1398	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	62.8306254942604	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTGTTCATTTACTTT	23793864	True	NA	24	True	AATAAA	-27	NA	23805964	23891316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_23806089_23807236_23807422_23887566_23887700_23889111_23889260_23890508
transcript_141755.known	chr3	+	1224	5	FSM	ENSG00000170142.12	ENST00000424381.5	1224	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	50.8152290165065	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCTGTGTTCATTTACT	23807508	True	NA	22	True	AATAAA	-25	NA	23810442	23891314	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_23810529_23811459_23811511_23887566_23887700_23889111_23889260_23890508
transcript_141756.known	chr3	-	1644	5	FSM	ENSG00000197885.11	ENST00000415901.6	1644	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	37.0438928839829	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATACAATAAAAGTATCAAA	-23915397	True	NA	-33	True	NA	NA	NA	23916924	23892309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_23893334_23900803_23901050_23910810_23910922_23911328_23911451_23916783
transcript_141757.known	chr3	-	1605	5	FSM	ENSG00000197885.11	ENST00000412028.5	1605	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	42.4168303860626	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAATAAAAGTATCAAAAAT	-23915436	True	NA	-30	True	NA	NA	NA	23916963	23892306	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_23893334_23900803_23901050_23910810_23910922_23911328_23911447_23916860
transcript_141766.known	chr3	+	566	4	FSM	ENSG00000174748.22	ENST00000645079.1	566	4	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	11369.4228036822	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGCCGTGGCCTTGGAAA	23669536	True	NA	NA	False	NA	NA	NA	23917137	23919393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_23917174_23917836_23918032_23918439_23918577_23919195
transcript_141769.known	chr3	+	824	4	FSM	ENSG00000174748.22	ENST00000644185.1	824	4	0	0	0	0	multi-exon	FALSE	canonical	3	1341	junction_1	10769.1344230733	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGCTTACAGGTGTTAT	23669546	True	NA	28	True	AATAAA	-17	NA	23917147	23919552	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_23917296_23917849_23918032_23918439_23918577_23919195
transcript_141772.known	chr3	+	571	4	FSM	ENSG00000174748.22	ENST00000643707.1	571	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	11376.0195440526	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAGCTATCAGAAGAAAT	23669697	False	NA	NA	False	NA	NA	NA	23917298	23919301	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_23917445_23917849_23918032_23918439_23918577_23919195
transcript_141775.known	chr3	+	2221	4	FSM	ENSG00000174748.22	ENST00000413699.7	2221	4	0	0	0	0	multi-exon	FALSE	canonical	3	2565	junction_1	10192.4364222801	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTTGATCATTGCATGA	23669530	True	NA	NA	False	CATAAA	-18	NA	23917131	23920989	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_23917240_23917849_23918032_23918439_23918577_23919195
transcript_141778.known	chr3	+	605	4	FSM	ENSG00000174748.22	ENST00000436146.2	605	4	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_1	11290.7333784047	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGCTTACAGGTGTTAT	23669546	True	NA	28	True	AATAAA	-17	NA	23917147	23919552	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_23917174_23917946_23918032_23918439_23918577_23919195
transcript_141781.known	chr3	+	564	4	FSM	ENSG00000174748.22	ENST00000644684.1	564	4	0	0	0	0	multi-exon	FALSE	canonical	2	323	junction_1	11248.7972986745	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAGGACAGTCATGTCT	23669546	True	NA	13	True	AATAAA	-2	NA	23917147	23919537	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_23917174_23917972_23918032_23918439_23918577_23919195
transcript_141785.known	chr3	-	4069	5	FSM	ENSG00000197885.11	ENST00000425478.7	4069	5	0	0	0	0	multi-exon	FALSE	canonical	2	59	junction_1	12.7082650271388	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTTGTCTGTGTGTGTG	-23915463	True	NA	NA	False	AATAAA	-25	NA	23916990	23889950	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_23893338_23900807_23901050_23910810_23910922_23911328_23911451_23916783
transcript_141786.known	chr3	-	1898	5	FSM	ENSG00000197885.11	ENST00000437230.5	1898	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	43.1074239545812	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATATTAAAACATCAAGTAA	-23915442	True	NA	NA	False	NA	NA	NA	23916969	23892096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_23893334_23900803_23901050_23910810_23910922_23911328_23911447_23916783
transcript_141787.known	chr3	+	562	4	FSM	ENSG00000174748.22	ENST00000412097.5	562	4	0	0	0	0	multi-exon	FALSE	canonical	1	16	junction_3	10031.8852443375	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGCCACAAGTTCCACCA	23669545	True	NA	NA	False	NA	NA	NA	23917146	23919411	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_23917174_23917849_23918032_23918439_23918584_23919202
transcript_141788.known	chr3	+	820	3	FSM	ENSG00000174748.22	ENST00000354811.5	820	3	0	0	0	0	multi-exon	FALSE	canonical	3	23760	junction_2	414.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTGCTTACAGGTGTTA	23917449	False	NA	27	True	AATAAA	-16	NA	23917704	23919551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_23918032_23918439_23918577_23919195
transcript_141789.known	chr3	-	6433	11	FSM	ENSG00000151090.20	ENST00000356447.9	6433	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	4.46766158073774	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTTTCCTGTCTCTTTC	-24494420	True	NA	-3	True	GATAAA	-43	NA	24494803	24118213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_24123126_24127498_24127758_24133315_24133463_24143500_24143707_24146674_24146823_24152389_24152491_24190073_24190335_24228937_24229002_24297225_24297372_24337299_24337372_24494686
transcript_141794.known	chr3	-	5389	36	FSM	ENSG00000077097.16	ENST00000435706.6	5389	36	0	0	0	0	multi-exon	TRUE	canonical	3	558	junction_35	140.945072526101	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGTCTCTTTACTG	-25653226	False	NA	-11	True	ATTAAA	-11	NA	25664499	25597985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_25598478_25599434_25599530_25601099_25601226_25604759_25604871_25606042_25606123_25607170_25607376_25609182_25609345_25609567_25609713_25612514_25612710_25615204_25615289_25615430_25615587_25618417_25618510_25618653_25618850_25619861_25620063_25620681_25620817_25623514_25623747_25624296_25624446_25624681_25624804_25626559_25626675_25626771_25626865_25627186_25627297_25628846_25628953_25629034_25629146_25630028_25630155_25630311_25630470_25630800_25630940_25632445_25632584_25632692_25632795_25633840_25634015_25635935_25636149_25637214_25637313_25638164_25638311_25642321_25642386_25643693_25643785_25645299_25645456_25664228
transcript_141805.nic	chr3	-	2505	15	ISM	ENSG00000077097.16	ENST00000424225.1	3525	27	-47	13417	-47	-1833	intron_retention	FALSE	canonical	3	558	junction_14	54.620770512952	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATATAGAAAACCAGAAAGC	-25653681	True	NA	NA	False	NA	NA	NA	25664954	25628889	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_25628953_25629034_25629146_25630028_25630155_25630311_25630470_25630800_25630940_25632445_25632584_25632692_25632795_25633840_25634015_25635935_25636149_25637214_25637313_25638164_25638311_25642321_25642386_25643693_25643785_25645299_25645456_25664228
transcript_141806.nic	chr3	-	2441	14	ISM	ENSG00000077097.16	ENST00000424225.1	3525	27	-47	13563	-47	-1979	intron_retention	FALSE	canonical	3	558	junction_13	56.0647343511928	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACTCTTTGCATTAATAT	-25653681	True	NA	NA	False	NA	NA	NA	25664954	25629035	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_25629146_25630028_25630155_25630311_25630470_25630800_25630940_25632445_25632584_25632692_25632795_25633840_25634015_25635935_25636149_25637214_25637313_25638164_25638311_25642321_25642386_25643693_25643785_25645299_25645456_25664228
transcript_141807.nic	chr3	-	2228	13	ISM	ENSG00000077097.16	ENST00000424225.1	3525	27	-47	14659	-47	-3075	intron_retention	FALSE	canonical	3	558	junction_12	55.8964195832096	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATATTATTAAAATAGTTG	-25653681	True	NA	NA	False	AATAAA	-1	NA	25664954	25630131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_25630155_25630311_25630470_25630800_25630940_25632445_25632584_25632692_25632795_25633840_25634015_25635935_25636149_25637214_25637313_25638164_25638311_25642321_25642386_25643693_25643785_25645299_25645456_25664228
transcript_141808.nic	chr3	-	2205	12	ISM	ENSG00000077097.16	ENST00000424225.1	3525	27	-47	14839	-47	-3255	intron_retention	FALSE	canonical	3	558	junction_11	57.4159824554306	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTATGTGTGTGTATAT	-25653681	True	NA	NA	False	CATAAA	-4	NA	25664954	25630311	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_25630470_25630800_25630940_25632445_25632584_25632692_25632795_25633840_25634015_25635935_25636149_25637214_25637313_25638164_25638311_25642321_25642386_25643693_25643785_25645299_25645456_25664228
transcript_141810.known	chr3	-	2166	13	FSM	ENSG00000151092.18	ENST00000675234.1	2166	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	111.711682468755	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCATCATGTAACCCTCA	-25779332	True	NA	-89	True	NA	NA	NA	25783442	25719341	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_25719636_25720013_25720192_25729132_25729319_25732318_25732484_25733871_25733983_25736003_25736150_25737333_25737456_25739576_25739800_25751097_25751264_25761677_25761709_25764065_25764312_25778573_25778689_25783259
transcript_141812.known	chr3	-	2534	12	FSM	ENSG00000151092.18	ENST00000280700.10	2534	12	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_8	18.3370644838343	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTTTTAGTGGTTATTT	-25779333	True	NA	-1	True	AATAAA	-19	NA	25783443	25718943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_25719636_25720013_25720192_25729132_25729319_25732318_25732484_25733871_25733983_25736003_25736150_25737333_25737456_25739576_25739800_25751097_25751264_25764065_25764312_25778573_25778689_25783259
transcript_141813.known	chr3	-	2086	12	FSM	ENSG00000151092.18	ENST00000308710.9	2086	12	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_6	107.429854108246	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTCTTCCATATGTGAC	-25779271	True	NA	-23	True	AATAAA	-14	NA	25783381	25719275	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_25719636_25720013_25720192_25729132_25729319_25732318_25732484_25733871_25733983_25736308_25736401_25737333_25737456_25739576_25739800_25751097_25751264_25764065_25764312_25778573_25778689_25783259
transcript_141815.known	chr3	-	2253	12	FSM	ENSG00000151092.18	ENST00000676225.1	2253	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	117.498232798386	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATATTCATGATTAAATGC	-25779314	True	NA	77	True	TTTAAA	-11	NA	25783424	25719175	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_25719636_25720013_25720192_25729132_25729319_25732318_25732484_25733871_25733983_25736003_25736150_25736308_25736401_25739576_25739800_25751097_25751264_25764065_25764312_25778573_25778689_25783259
transcript_141819.known	chr3	-	2024	11	FSM	ENSG00000151092.18	ENST00000396649.7	2024	11	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	79.6557593649072	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCCATATGTGACTATAA	-25779328	True	NA	-18	True	AATAAA	-19	NA	25783438	25719270	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_25719636_25729132_25729319_25732318_25732484_25733871_25733983_25736003_25736150_25737333_25737456_25739576_25739800_25751097_25751264_25764065_25764312_25778573_25778689_25783259
transcript_141826.nic	chr3	-	2038	11	NIC	ENSG00000151092.18	novel	2534	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	19	junction_3	87.7681035456503	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTTCCATATGTGACT	-25779333	True	NA	-22	True	AATAAA	-15	NA	25783443	25719274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_25719636_25720013_25720192_25729132_25729319_25733871_25733983_25736003_25736150_25737333_25737456_25739576_25739800_25751097_25751264_25764065_25764312_25778573_25778689_25783259
transcript_141832.known	chr3	+	1506	3	FSM	ENSG00000151093.8	ENST00000280701.8	1506	3	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_1	3.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATATGTGAAGAAATTATG	25789867	True	NA	NA	False	ATTAAA	-17	NA	25790089	25794531	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_25790148_25790989_25791998_25794091
transcript_141834.known	chr3	+	409	1	FSM	ENSG00000213872.3	ENST00000458542.1	409	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTCATGTGCATGTTTT	NA	False	NA	NA	False	AAGAAA	-9	NA	25749487	25749896	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_25749500_25749900
transcript_141835.known	chr3	+	1696	2	FSM	ENSG00000179796.12	ENST00000396641.6	1696	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGTGACTTATTGGTCAA	26622593	True	NA	13	True	AATAAA	-25	NA	26622805	26710776	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_26623238_26709512
transcript_141838.known	chr3	-	3775	25	FSM	ENSG00000033867.17	ENST00000455077.5	3775	25	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_24	35.7520152889627	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTATTTAATGAAATGCTC	-27474093	True	NA	-66	True	TTTAAA	-39	NA	27484347	27376605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_27376846_27379248_27379357_27383152_27383251_27385891_27386024_27389930_27390105_27391739_27391809_27394517_27394770_27394953_27395116_27397683_27397798_27398191_27398354_27400763_27400870_27403138_27403385_27404829_27404964_27409355_27409531_27411641_27411749_27418485_27418633_27420699_27420788_27421621_27421780_27424036_27424153_27433915_27434105_27436387_27436549_27437387_27437527_27448650_27448798_27452416_27452499_27484078
transcript_141842.nic	chr3	-	3430	22	ISM	ENSG00000033867.17	ENST00000437179.5	3667	24	-101	9286	-28	0	5prime_fragment	FALSE	canonical	3	88	junction_21	35.9382185918495	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAAAAGATAACAATTTTA	-27474194	True	NA	49	True	AAAAAG	-34	NA	27484448	27385891	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_27386024_27389930_27390105_27391739_27391809_27394517_27394770_27394953_27395116_27397683_27397798_27398191_27398354_27400763_27400870_27403138_27403385_27404829_27404964_27409355_27409531_27411641_27411749_27418485_27418633_27420699_27420788_27421621_27421780_27424036_27424153_27433915_27434105_27436387_27436549_27437387_27437527_27448650_27448798_27452416_27452499_27484078
transcript_141852.nic	chr3	-	553	3	ISM	ENSG00000033867.17	ENST00000428005.1	1572	7	-28	25056	-28	-25056	5prime_fragment	FALSE	canonical	3	88	junction_2	8.5	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATAAAGAATCAGATAAAGA	-27474194	True	NA	NA	False	AAGAAA	-2	NA	27484448	27448696	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_27448798_27452416_27452499_27484078
transcript_141853.known	chr3	-	3264	6	FSM	ENSG00000163508.13	ENST00000449599.4	3264	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1.09544511501033	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGACATAGCTCTGTCTTCT	-27722303	True	NA	-7	True	AATAAA	-19	NA	27722323	27715952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_27717809_27718586_27718649_27718734_27718894_27719359_27719482_27720170_27720326_27721413
transcript_141854.known	chr3	+	332	3	FSM	ENSG00000225548.7	ENST00000455984.1	332	3	0	0	0	0	multi-exon	TRUE	canonical	3	75	junction_2	1.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGCCTGGATTCAAGTCA	27821430	False	NA	NA	False	NA	NA	NA	27821597	27860192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_27821725_27824649_27824749_27860086
transcript_141855.known	chr3	+	543	3	FSM	ENSG00000225548.7	ENST00000414382.5	543	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	39	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAATATTTTTATTTTTAT	27821320	True	NA	NA	False	AGTAAA	-18	NA	27821487	27891301	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_27821725_27824649_27824749_27891094
transcript_141858.known	chr3	-	4403	8	FSM	ENSG00000163512.14	ENST00000479665.6	4403	8	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_2	37.9881829101673	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGGAACTTGAATTGATT	-28348078	True	NA	-17	True	AATAAA	-39	NA	28348824	28321046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_28324455_28326831_28326951_28332368_28332428_28336736_28336886_28337936_28338037_28338492_28338616_28340401_28340623_28348600
transcript_141864.known	chr3	-	943	7	FSM	ENSG00000163512.14	ENST00000334100.10	943	7	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	40.1524871237414	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTGTTTTATCATTTGG	-28348585	False	21	-14	True	AATAAA	-16	NA	28348629	28331688	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_28331951_28332368_28332428_28336736_28336886_28337936_28338037_28338492_28338616_28340401_28340623_28348600
transcript_141865.known	chr3	-	1366	7	FSM	ENSG00000163512.14	ENST00000420543.6	1366	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	50.4405590769968	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCATTGTTTTATCATTT	NA	False	NA	-16	True	AATAAA	-14	NA	28349050	28331690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_28331955_28332368_28332428_28336736_28336886_28337936_28338037_28338492_28338616_28340401_28340623_28348600
transcript_141867.nnic	chr3	+	768	5	NIC	ENSG00000187118.14	novel	670	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	409.11398167259	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGTTTCTTAAATGGG	28237543	True	NA	19	True	AATAAA	-15	NA	28241583	28319773	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_28241813_28263290_28263381_28294433_28294527_28316332_28316424_28319508
transcript_141869.known	chr3	+	670	5	FSM	ENSG00000187118.14	ENST00000418849.2	670	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	395.370079798662	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGTTTCTTAAATGGG	28237583	True	NA	19	True	AATAAA	-15	NA	28241623	28319773	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_28241813_28253730_28253766_28263290_28263381_28316332_28316424_28319508
transcript_141870.known	chr3	+	6009	4	FSM	ENSG00000187118.14	ENST00000466830.6	6009	4	0	0	0	0	multi-exon	FALSE	canonical	3	636	junction_1	143.206920999728	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAGCCAAAAAAAAAAAGTTT	28237578	True	NA	NA	False	AGTAAA	-15	NA	28241618	28325142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_28241813_28263290_28263381_28316332_28316424_28319508
transcript_141873.known	chr3	+	724	4	FSM	ENSG00000187118.14	ENST00000334841.10	724	4	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_1	387.893742609436	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGTTTCTTAAATGGG	28237583	True	NA	19	True	AATAAA	-15	NA	28241623	28319773	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_28241902_28263290_28263381_28316332_28316424_28319508
transcript_141874.known	chr3	+	549	3	FSM	ENSG00000187118.14	ENST00000423894.5	549	3	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_1	301	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTTGGTTTCTTAAATG	28237577	True	NA	17	True	AATAAA	-13	NA	28241617	28319771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_28241813_28316332_28316424_28319508
transcript_141875.known	chr3	+	8449	15	FSM	ENSG00000144642.22	ENST00000383767.7	8449	15	0	0	0	0	multi-exon	TRUE	canonical	1	6	junction_10	6.94328334964586	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAATAGGGCTGTTGTGTT	29281043	True	NA	NA	False	AATAAA	-19	NA	29281070	30010386	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_29281757_29434742_29434916_29488440_29488500_29587113_29587206_29739719_29739878_29762909_29762990_29868857_29868965_29884161_29884209_29897378_29897476_29899704_29899756_29936085_29936197_29944206_29944255_29988142_29988224_29991081_29991210_30003855
transcript_141876.known	chr3	+	1547	14	FSM	ENSG00000144642.22	ENST00000452462.5	1547	14	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_10	6.39063664171188	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAAAGTTTTTATGTGC	29281517	False	NA	NA	False	NA	NA	NA	29281551	30004013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_29281757_29434742_29434916_29488440_29488500_29587113_29587206_29739719_29739878_29762909_29762990_29868857_29868965_29884161_29884209_29897378_29897476_29899704_29899756_29936085_29936197_29988142_29988224_29991081_29991210_30003855
transcript_141878.known	chr3	+	2757	14	FSM	ENSG00000144642.22	ENST00000383766.6	2757	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.73068451331314	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCCGGACCAGTTCTTT	29281417	False	NA	NA	False	TTTAAA	-24	NA	29281451	30005129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_29281757_29434745_29434916_29488440_29488500_29587113_29587206_29739719_29739878_29762909_29762990_29868857_29868965_29884161_29884209_29897378_29897476_29936085_29936197_29944206_29944255_29988142_29988224_29991081_29991210_30003855
transcript_141888.known	chr3	-	738	2	FSM	ENSG00000235904.3	ENST00000635847.1	738	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACTTTATCACATTTTTT	-29280889	False	NA	NA	False	AATAAA	-22	NA	29280904	29264193	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_29264758_29280730
transcript_141890.known	chr3	+	4530	7	FSM	ENSG00000163513.19	ENST00000295754.10	4530	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	12.5918845116827	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATTTGCCTCATTTGGTT	30605380	True	NA	63	True	NA	NA	NA	30606600	30694142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_30606978_30644746_30644916_30650269_30650461_30671637_30672438_30674104_30674247_30688383_30688512_30691419
transcript_141891.known	chr3	-	4509	12	FSM	ENSG00000144644.15	ENST00000454381.3	4509	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.642824346533225	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAACAAAACAA	-30894640	True	NA	NA	False	TTTAAA	-9	NA	30894661	30797676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_30801089_30833852_30833935_30834216_30834282_30838996_30839114_30844209_30844265_30844386_30844467_30849995_30850112_30850834_30850942_30854698_30854790_30857014_30857142_30861592_30861766_30894577
transcript_141895.known	chr3	+	4107	16	FSM	ENSG00000163527.10	ENST00000295770.4	4107	16	0	0	0	0	multi-exon	FALSE	canonical	3	583	junction_6	53.1158063940376	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAAGTGTTGTTTTTTAC	31529240	True	NA	21	True	AATAAA	-17	NA	31532924	31637616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_31533313_31576395_31576505_31579808_31580097_31596797_31596864_31600359_31600460_31615104_31615204_31616928_31617076_31617939_31617989_31619675_31619831_31622096_31622309_31623673_31623862_31624913_31625086_31625953_31626128_31629297_31629412_31632934_31633148_31635983
transcript_141909.known	chr3	+	1664	10	FSM	ENSG00000163527.10	ENST00000423527.5	1664	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	205.125977552007	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	31529287	True	NA	NA	False	NA	NA	NA	31532971	31620274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_31533313_31576395_31576505_31579808_31580097_31596797_31596864_31600359_31600460_31615104_31615204_31616928_31617076_31617939_31617989_31619675_31619831_31619964
transcript_14191.known	chr1	+	1267	3	FSM	ENSG00000284738.2	ENST00000641448.2	1325	3	53	5	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATTTATTTGGTCATTA	153923267	True	NA	NA	False	TATAAA	-23	NA	153923336	153935240	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_153923963_153928634_153928771_153934735
transcript_141912.nic	chr3	+	2643	9	ISM	ENSG00000163527.10	ENST00000423527.5	1664	10	-823	-22	-489	0	intron_retention	TRUE	canonical	3	583	junction_6	53.0589295029593	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCATTGAATTTGTATT	31532097	False	NA	NA	False	AAAAAG	-5	NA	31532148	31620296	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_31533313_31576395_31576505_31579808_31580097_31596797_31596864_31600359_31600460_31615104_31615204_31616928_31617076_31617939_31617989_31619675
transcript_141924.nic	chr3	-	3486	12	NIC	ENSG00000144645.15	novel	3625	12	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_11	56.2669258281342	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTGTCTGTGTTTTAT	-31959467	True	NA	NA	False	AATATA	-16	NA	31960367	31660824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_31662117_31664078_31664233_31668641_31668825_31670796_31670984_31683633_31684115_31702358_31702509_31733256_31733412_31747909_31748121_31830039_31830232_31876432_31876513_31879654_31879831_31960142
transcript_141925.known	chr3	-	3625	12	FSM	ENSG00000144645.15	ENST00000396556.7	3625	12	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_11	24.3788961709179	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTGTCTGTGTTTTAT	-31981234	False	NA	NA	False	AATATA	-16	NA	31981262	31660824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_31662117_31664078_31664233_31668641_31668825_31670796_31670984_31683633_31684115_31702358_31702509_31733256_31733412_31747909_31748121_31830039_31830232_31876432_31876513_31879654_31879831_31980898
transcript_141930.nic	chr3	-	3860	11	NIC	ENSG00000144645.15	novel	3625	12	NA	NA	-368	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_10	65.3562544826431	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTGTCTGTGTTTTAT	-31981481	True	NA	NA	False	AATATA	-16	NA	31981673	31660824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_31662117_31664078_31664233_31668641_31668825_31670796_31670984_31683633_31684115_31702358_31702509_31733256_31733412_31747909_31748121_31830039_31830232_31876432_31876513_31980898
transcript_141932.known	chr3	-	2624	11	FSM	ENSG00000144645.15	ENST00000438237.6	2624	11	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_8	64.1988317650719	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCCTGTCAAAATGAAGG	-31979449	True	NA	NA	False	NA	NA	NA	31981300	31661671	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_31662117_31664078_31664233_31668641_31668825_31670796_31670984_31683633_31684115_31702358_31702509_31733256_31733412_31747909_31748121_31876432_31876513_31879654_31879831_31980898
transcript_141942.nic	chr3	-	1604	7	ISM	ENSG00000144645.15	ENST00000396556.7	3625	12	-383	41641	-340	-90	5prime_fragment	FALSE	canonical	3	173	junction_6	20.6861467331803	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGACAATGAAGATAAGGAA	-31981048	True	NA	NA	False	NA	NA	NA	31981645	31702465	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_31702509_31733256_31733412_31747909_31748121_31830039_31830232_31876432_31876513_31879654_31879831_31980898
transcript_141948.nic	chr3	-	1302	5	NIC	ENSG00000144645.15	novel	758	5	NA	NA	-331	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	90.7644616576334	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGAGGGAGATGTGTG	-31981039	True	NA	-1	True	AATAAA	-18	NA	31981636	31822127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_31822244_31830039_31830232_31876432_31876513_31879654_31879831_31980898
transcript_141951.known	chr3	+	3217	2	FSM	ENSG00000197385.6	ENST00000360311.5	3217	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATAACTAATACAGATGC	31981130	True	NA	99	True	AATACA	-31	NA	31981749	31991723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_31981903_31988659
transcript_141953.known	chr3	+	3947	8	FSM	ENSG00000152642.11	ENST00000282541.10	3947	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	6.59003576838331	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCACCGTGGATCCTGTT	32105949	True	NA	7	True	AATAAA	-17	NA	32106619	32168709	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_32106759_32128075_32128254_32138586_32138728_32140227_32140367_32146621_32146735_32158875_32159110_32159567_32159675_32165813
transcript_141955.known	chr3	-	1891	1	FSM	ENSG00000261572.1	ENST00000565519.1	1891	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGTGGCTTAAAATCACCA	-32238492	True	NA	NA	False	AATAAA	-14	NA	32238578	32236687	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_32236700_32238600
transcript_141956.known	chr3	+	1169	4	FSM	ENSG00000170293.9	ENST00000307526.4	1169	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	8.04155872120988	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGTTGTGTTTGATTGG	32236581	True	NA	24	True	ATTAAA	-17	NA	32238679	32370321	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_32239120_32357372_32357547_32367871_32367989_32369883
transcript_141958.known	chr3	+	996	3	FSM	ENSG00000170293.9	ENST00000458535.6	996	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	28	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGTTGTGTTTGATTGG	32236580	True	NA	24	True	ATTAAA	-17	NA	32238678	32370321	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_32239120_32367871_32367989_32369883
transcript_141959.known	chr3	+	976	5	FSM	ENSG00000153551.14	ENST00000454304.6	976	5	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_3	143.224474165556	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGGGCACCAGGAAAGGC	32388837	True	NA	NA	False	NA	NA	NA	32391888	32454358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_32392066_32441839_32442014_32449453_32449553_32452065_32452474_32454240
transcript_141960.known	chr3	+	1856	5	FSM	ENSG00000153551.14	ENST00000334983.10	1856	5	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_2	75.4995860915807	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCAGCACCCGTGGTGT	32388801	True	NA	NA	False	NA	NA	NA	32391852	32455528	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_32392066_32441839_32442014_32449453_32449553_32452391_32452474_32454240
transcript_141963.known	chr3	+	1214	4	FSM	ENSG00000153551.14	ENST00000349718.8	1214	4	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	118.016947935455	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGGCCAGTTGCACAAGGA	32391605	False	NA	7	True	AATAAA	-8	NA	32391697	32454830	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_32392066_32441839_32442014_32452391_32452474_32454240
transcript_141964.known	chr3	-	3307	4	FSM	ENSG00000091317.8	ENST00000205636.4	3307	4	0	0	0	0	multi-exon	FALSE	canonical	3	576	junction_1	31.6684210040363	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACCTTTGTAAGTGTTTA	-32496258	True	NA	-11	True	AATAAA	-20	NA	32502852	32481311	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_32484098_32487937_32488037_32491709_32491887_32502607
transcript_141966.known	chr3	+	780	3	FSM	ENSG00000153551.14	ENST00000465248.1	780	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	163	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATATTGACTCGGCCAG	32392028	False	NA	-4	True	NA	NA	NA	32392038	32454819	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_32392066_32441839_32442014_32454240
transcript_141969.known	chr3	-	2485	13	FSM	ENSG00000144635.9	ENST00000273130.9	2485	13	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_9	47.9409358829522	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGTTGCATTCTCTTA	-32562944	True	NA	-1	True	AATAAA	-29	NA	32570858	32525973	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_32526909_32528445_32528602_32529539_32529661_32530283_32530329_32530460_32530521_32532985_32533098_32534510_32534647_32537010_32537105_32541036_32541207_32544875_32545107_32545848_32545966_32570345_32570420_32570624
transcript_141973.known	chr3	-	1827	11	FSM	ENSG00000144635.9	ENST00000432458.6	1827	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	123.549828004737	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTATCAGATAGCGTTT	-32562944	True	NA	87	True	AATAAA	-29	NA	32570858	32526283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_32526909_32528445_32528602_32529539_32529661_32530283_32530329_32530460_32530521_32532985_32533098_32534510_32534647_32537010_32537105_32541036_32541207_32570345_32570420_32570624
transcript_14198.known	chr1	-	2631	14	FSM	ENSG00000160741.17	ENST00000368633.2	2631	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_11	50.7851956250496	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGGTGTGGTTAGTTAT	-153958577	False	18768	0	True	AATAAA	-15	NA	153958612	153947674	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153948330_153948457_153948645_153949114_153949385_153951259_153951667_153952017_153952263_153952396_153952447_153952570_153952636_153952804_153952835_153953265_153953370_153953537_153953607_153954254_153954317_153954872_153954990_153955064_153955167_153958344
transcript_141980.known	chr3	-	814	3	FSM	ENSG00000144635.9	ENST00000475193.1	814	3	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_1	13	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATCTGCTGATGGTAAAAA	-32562911	True	NA	NA	False	NA	NA	NA	32570825	32545426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_32545966_32570345_32570420_32570624
transcript_141981.nic	chr3	-	2595	2	ISM	ENSG00000144635.9	ENST00000475193.1	814	3	21	22578	21	-22131	5prime_fragment	FALSE	canonical	3	391	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCCTGGCACGGCAGCTC	-32562890	True	NA	NA	False	AATAAA	-5	NA	32570804	32568004	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_32570420_32570624
transcript_141992.known	chr3	+	2815	19	FSM	ENSG00000182973.20	ENST00000328834.10	2772	19	-43	0	0	0	multi-exon	FALSE	canonical	3	227	junction_12	23.3360448159992	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTTACACTTTTATTGA	32685119	False	NA	16	True	ATTAAA	-18	NA	32685144	32773875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_32685483_32703867_32703963_32704810_32704973_32708669_32708821_32713226_32713370_32716224_32716312_32717153_32717238_32720113_32720232_32725449_32725600_32727667_32727871_32733422_32733545_32734799_32734977_32737409_32737491_32759457_32759572_32762732_32762864_32764454_32764491_32764681_32764810_32769886_32769963_32773456
transcript_141999.known	chr3	+	2573	18	FSM	ENSG00000182973.20	ENST00000331889.10	2573	18	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_12	63.9517010657586	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGTCAATTCTACCCC	32685119	False	NA	13	True	AATAAA	-20	NA	32685144	32773714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_32685483_32703867_32703963_32704810_32704973_32708669_32708821_32713226_32713370_32716224_32716312_32717153_32717238_32720113_32720232_32725449_32725600_32727667_32727871_32733422_32733545_32734799_32734977_32759457_32759572_32762732_32762864_32764454_32764491_32764681_32764810_32769886_32769963_32773456
transcript_1420.known	chr1	-	1544	4	FSM	ENSG00000162585.17	ENST00000420515.1	1544	4	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	460.068352409605	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGACATTTTGTGCATTT	-2181845	True	NA	NA	False	NA	NA	NA	2194748	2191900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_2192976_2193638_2193911_2193997_2194134_2194687
transcript_142019.nnic	chr3	+	2946	4	NNC	ENSG00000206557.6	novel	8704	4	NA	NA	-36914	-5550	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	68.7717642318092	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTATAAAACATGGAAAAAAT	NA	False	NA	26	True	AGTAAA	-12	NA	32781082	32892274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_32781811_32873817_32873986_32885933_32886069_32890359
transcript_142020.nnic	chr3	+	3575	4	NNC	ENSG00000206557.6	novel	8704	4	NA	NA	-1368	-5550	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	68.7717642318092	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTATAAAACATGGAAAAAAT	32807759	True	NA	26	True	AGTAAA	-12	NA	32816628	32892274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_32817986_32873817_32873986_32885933_32886069_32890359
transcript_142021.known	chr3	+	8704	4	FSM	ENSG00000206557.6	ENST00000383763.6	8704	4	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	21.1712593442672	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTGTGTCTGTGTGATC	32817985	False	NA	19	True	AATAAA	-19	NA	32817996	32897824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_32818933_32873817_32873986_32885933_32886069_32890359
transcript_142040.known	chr3	-	2512	16	FSM	ENSG00000170266.16	ENST00000399402.7	2512	16	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_15	91.1371615874788	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTGGTTTGATCTGTGG	-33096822	False	NA	0	True	AATAAA	-38	NA	33096835	32996608	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_32997345_33014055_33014311_33016708_33016841_33018447_33018562_33021565_33021656_33024250_33024326_33046119_33046233_33051757_33051799_33051882_33052005_33053490_33053550_33058088_33058270_33065462_33065558_33068229_33068291_33068819_33068971_33072543_33072714_33096718
transcript_142041.known	chr3	-	2523	16	FSM	ENSG00000170266.16	ENST00000307363.10	2523	16	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_6	25.2899628750661	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAAATAGTCTTGGTTTG	-33093433	True	NA	-8	True	AATAAA	-30	NA	33097146	32996616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_32997345_33014055_33014311_33016708_33016841_33018447_33018562_33021565_33021656_33024250_33024326_33046119_33046233_33051757_33051799_33051882_33052005_33053490_33053550_33058088_33058270_33065462_33065558_33068229_33068291_33068819_33068971_33072543_33072714_33097010
transcript_142051.known	chr3	-	2018	13	FSM	ENSG00000170266.16	ENST00000307377.12	2018	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_11	151.463325227228	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGTCACTGTTTTTAAT	-33093433	True	NA	-14	True	AATAAA	-16	NA	33097146	32996728	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_32997345_33014055_33014311_33016708_33016841_33018447_33018562_33021565_33021656_33024250_33024326_33046119_33046233_33051757_33051799_33051882_33052005_33053490_33053550_33065462_33065558_33072543_33072714_33097010
transcript_142061.known	chr3	-	4310	2	FSM	ENSG00000188167.9	ENST00000342462.5	4310	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCATCCATGCTTTTCTT	-33093433	True	NA	NA	False	AATAAA	-27	NA	33097146	33090421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_33094304_33096718
transcript_142062.known	chr3	-	3451	2	FSM	ENSG00000188167.9	ENST00000416695.6	3451	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCATCCATGCTTTTCTTC	-33096788	False	3713	NA	False	AATAAA	-28	NA	33096801	33090420	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_33093789_33096718
transcript_142064.known	chr3	+	6595	7	FSM	ENSG00000170275.15	ENST00000320954.11	6595	7	0	0	0	0	multi-exon	FALSE	canonical	1	287	junction_1	224.696585544942	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTATTTTCTATTCTAT	33105374	True	NA	5	True	ATTAAA	-17	NA	33114013	33147773	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_33114549_33120343_33120494_33124407_33124580_33129938_33130068_33132554_33132701_33134181_33134266_33142394
transcript_142067.known	chr3	+	1811	6	FSM	ENSG00000170275.15	ENST00000449224.1	1811	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	388.27443902477	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGATGATAATTGTGAAAAC	33105414	True	NA	15	True	AAGAAA	-12	NA	33114053	33143158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_33114549_33120343_33120494_33124407_33124580_33132554_33132701_33134181_33134266_33142394
transcript_142069.known	chr3	-	4602	5	FSM	ENSG00000173705.9	ENST00000309558.8	4602	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	3.8405728739343	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGCTGAATGTATTTTA	-33218607	True	NA	-2	True	AATAAA	-16	NA	33218810	33150042	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_33154034_33174885_33175075_33207807_33207927_33213927_33214106_33218685
transcript_142073.known	chr3	-	729	4	FSM	ENSG00000173705.9	ENST00000412539.1	729	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	7.71722460186015	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGGTGGATGATGACACC	-33218590	True	NA	NA	False	NA	NA	NA	33218793	33153709	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_33154034_33207807_33207927_33213927_33214106_33218685
transcript_142076.known	chr3	+	1859	16	FSM	ENSG00000153558.16	ENST00000451636.5	1859	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	6.63190939490447	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGTTAGCACAAACTGAG	33277189	True	NA	NA	False	AAAAAG	-6	NA	33277452	33385948	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_33277516_33297663_33297726_33297868_33297963_33358966_33359022_33359282_33359358_33364624_33364720_33373091_33373161_33373259_33373356_33373577_33373705_33373846_33373922_33375287_33375419_33377272_33377334_33378102_33378148_33378684_33378835_33383988_33384202_33385500
transcript_142077.known	chr3	+	1581	15	FSM	ENSG00000153558.16	ENST00000421391.5	1581	15	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	4.10077145554495	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACCTGGATCTCTTAAGA	33277213	True	NA	NA	False	NA	NA	NA	33277476	33385862	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_33277516_33297663_33297726_33358966_33359022_33359282_33359358_33364624_33364720_33373091_33373161_33373240_33373356_33373577_33373705_33373846_33373922_33375287_33375419_33377272_33377334_33378102_33378148_33378684_33378742_33383988_33384202_33385500
transcript_142079.known	chr3	+	1618	13	FSM	ENSG00000153558.16	ENST00000432809.5	1618	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	6.12542515531235	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCACAATTCCATTTTGA	33277187	True	NA	NA	False	NA	NA	NA	33277450	33386023	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_33277516_33297663_33297726_33297868_33297963_33373091_33373161_33373259_33373356_33373577_33373705_33373846_33373922_33375287_33375419_33377272_33377334_33378102_33378148_33378684_33378742_33383988_33384202_33385500
transcript_142085.known	chr3	-	2074	17	FSM	ENSG00000153560.12	ENST00000283628.9	2074	17	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_16	81.4436154649338	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGAGCACATCGGCACAG	-33440497	False	NA	NA	False	NA	NA	NA	33440510	33390133	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_33390369_33392562_33392615_33393311_33393455_33396161_33396281_33397044_33397136_33400188_33400283_33400961_33401017_33402800_33402905_33408689_33408798_33409235_33409347_33409448_33409602_33411580_33411688_33412721_33412828_33416757_33416835_33425589_33425742_33439735_33439926_33440333
transcript_142086.known	chr3	-	4175	16	FSM	ENSG00000153560.12	ENST00000283629.8	4175	16	0	0	0	0	multi-exon	TRUE	canonical	3	130	junction_8	54.3472783740517	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGTCTCATTTAAAATC	-33439134	True	NA	-1	True	AATAAA	-23	NA	33440405	33388335	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_33390369_33392562_33392615_33393311_33393455_33396161_33396281_33397044_33397136_33400188_33400283_33400961_33401017_33402800_33402905_33408689_33408798_33409235_33409347_33409448_33409602_33411580_33411688_33412721_33412828_33416757_33416835_33425589_33425742_33439735
transcript_142089.known	chr3	-	3669	15	FSM	ENSG00000153560.12	ENST00000447368.6	3669	15	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_8	42.2553583125554	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGTGTCTCATTTAAA	-33439997	False	33	-4	True	AATAAA	-20	NA	33440010	33388338	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_33390369_33392562_33392615_33393311_33393455_33396161_33396281_33397044_33397136_33400188_33400283_33400961_33401017_33402800_33402905_33409235_33409347_33409448_33409602_33411580_33411688_33412721_33412828_33416757_33416835_33425589_33425742_33439735
transcript_14209.known	chr1	+	1750	10	FSM	ENSG00000143578.16	ENST00000271889.8	1750	10	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	44.1246830506576	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTATCCCAGAAGTTTGAA	153966393	True	NA	15	True	AATAAA	-15	NA	153967920	153974359	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_153968185_153968521_153968700_153968929_153969177_153969333_153969456_153972743_153972837_153972971_153973079_153973194_153973264_153973379_153973465_153973619_153973717_153973871
transcript_142093.nnic	chr3	-	5631	37	NIC	ENSG00000163539.18	novel	7282	39	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	50.1280459189696	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGTGCGTGTGTGTCCTT	-33714173	True	NA	NA	False	AATAAA	-28	NA	33718257	33497754	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_33498718_33501651_33501769_33510557_33510765_33516022_33516152_33516980_33517175_33535232_33535462_33538788_33538943_33543432_33543540_33544697_33544842_33551251_33551396_33559306_33559386_33560807_33560972_33570726_33570791_33573109_33573355_33574472_33574497_33576168_33576276_33581820_33581929_33584749_33584921_33592394_33592497_33602951_33603126_33604153_33604210_33606590_33606759_33607383_33607462_33608566_33608627_33612000_33612072_33619602_33619739_33622134_33622281_33626987_33627081_33632291_33632372_33644756_33644904_33663444_33663516_33684358_33684457_33687059_33687136_33688276_33688369_33689828_33689933_33696854_33696934_33717807
transcript_142100.nnic	chr3	-	2521	21	NNC	ENSG00000163539.18	novel	1940	12	NA	NA	-3	8575	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	64.5308259671299	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTCTCGCACTGTGGAA	-33714173	True	NA	NA	False	AATAAA	-15	NA	33718257	33593837	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_33594138_33594950_33594969_33596710_33596735_33602951_33603126_33604153_33604210_33606590_33606759_33607383_33607462_33608566_33608627_33612000_33612072_33619602_33619739_33622134_33622281_33626987_33627081_33632291_33632372_33644756_33644904_33663444_33663516_33684358_33684457_33687059_33687136_33688276_33688369_33689828_33689933_33696854_33696934_33717807
transcript_142106.nic	chr3	-	3115	18	ISM	ENSG00000163539.18	ENST00000682230.1	7159	39	-3	105771	-3	397	5prime_fragment	FALSE	canonical	3	143	junction_10	19.9580875715979	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATTTCGGATTTTGGATT	-33714173	True	NA	NA	False	NA	NA	NA	33718257	33602015	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_33603126_33604153_33604210_33606590_33606759_33607383_33607462_33608566_33608627_33612000_33612072_33619602_33619739_33622134_33622281_33626987_33627081_33632291_33632372_33644756_33644904_33663444_33663516_33684358_33684457_33687059_33687136_33688276_33688369_33689828_33689933_33696854_33696934_33717807
transcript_142107.nic	chr3	-	2942	18	ISM	ENSG00000163539.18	ENST00000682230.1	7159	39	-3	105944	-3	224	5prime_fragment	FALSE	canonical	3	143	junction_10	19.9580875715979	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAAAACTTAGCCGGGCAT	-33714173	True	NA	NA	False	ACTAAA	-3	NA	33718257	33602188	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_33603126_33604153_33604210_33606590_33606759_33607383_33607462_33608566_33608627_33612000_33612072_33619602_33619739_33622134_33622281_33626987_33627081_33632291_33632372_33644756_33644904_33663444_33663516_33684358_33684457_33687059_33687136_33688276_33688369_33689828_33689933_33696854_33696934_33717807
transcript_142114.known	chr3	+	5884	18	FSM	ENSG00000170248.15	ENST00000307296.8	5884	18	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_10	52.0893562838156	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTTGGAGTATGAATTC	33789046	True	NA	16	True	AATAAA	-17	NA	33798629	33869703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_33798938_33812071_33812127_33813558_33813629_33821954_33822083_33825186_33825341_33826479_33826581_33828852_33828970_33836043_33836267_33838203_33838328_33841896_33842075_33844111_33844224_33845418_33845589_33852487_33852737_33853878_33854014_33855165_33855261_33864005_33864130_33865242_33865431_33866350
transcript_142117.nic	chr3	+	2054	14	ISM	ENSG00000170248.15	ENST00000307296.8	5884	18	-40	15800	15	-1426	5prime_fragment	FALSE	canonical	3	421	junction_10	40.2928628034719	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAACAATCTAATAATGAA	33789006	True	NA	NA	False	NA	NA	NA	33798589	33853903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_33798938_33812071_33812127_33813558_33813629_33821954_33822083_33825186_33825341_33826479_33826581_33828852_33828970_33836043_33836267_33838203_33838328_33841896_33842075_33844111_33844224_33845418_33845589_33852487_33852737_33853878
transcript_142122.known	chr3	+	3067	11	FSM	ENSG00000144681.11	ENST00000273183.8	3067	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	9.39201788754685	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTCCTGATCTCTTCT	36380436	False	NA	20	True	AATAAA	-34	NA	36380503	36548007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_36380755_36443363_36443641_36482991_36483093_36484976_36485059_36486133_36486250_36493150_36493230_36504392_36504458_36505745_36505835_36528695_36528748_36528847_36528986_36546190
transcript_142128.known	chr3	+	1366	9	FSM	ENSG00000144681.11	ENST00000457375.6	1366	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	11.1740491765519	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGGGACGAGGCTGAGAG	36380435	False	NA	NA	False	AAAACA	-36	NA	36380502	36546488	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_36380755_36443363_36443641_36486133_36486250_36493150_36493230_36504392_36504458_36505745_36505835_36528695_36528748_36528847_36528986_36546190
transcript_14213.known	chr1	+	1557	10	FSM	ENSG00000143578.16	ENST00000368603.5	1557	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	49.3986054683958	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTATCCCAGAAGTTT	153967965	True	NA	12	True	AATAAA	-12	NA	153968236	153974356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_153968311_153968521_153968700_153968929_153969177_153969333_153969456_153972743_153972837_153972971_153973079_153973194_153973264_153973379_153973465_153973619_153973717_153973871
transcript_142136.known	chr3	-	5446	5	FSM	ENSG00000163673.8	ENST00000636136.2	5651	5	204	1	204	0	multi-exon	FALSE	canonical	1	2	junction_1	2.8613807855649	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGCAGGTCCTCAAAGTT	-36764321	False	NA	NA	False	AATAAA	-15	NA	36764349	36712421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_36715522_36718009_36718178_36721526_36721660_36737207_36739085_36764181
transcript_142137.known	chr3	-	513	2	FSM	ENSG00000178567.8	ENST00000624586.1	513	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCTAAAGTAAACACTTTG	-36990852	False	NA	NA	False	TTTAAA	-7	NA	36992268	36990310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_36990436_36991880
transcript_142140.known	chr3	+	2576	20	FSM	ENSG00000076242.16	ENST00000674019.1	2576	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	107.88094905485	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATAGATGTGTCTTAACA	36990501	False	NA	-3	True	TATAAA	-1	NA	36993763	37050823	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_36993891_36994829_36994954_36996618_36996710_37000954_37001054_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37014431_37014545_37017505_37017600_37020309_37020464_37025636_37026008_37028783_37028933_37040185_37040295_37042267_37042332_37047518_37047684_37048516_37048610_37048903_37049018_37050485
transcript_142141.known	chr3	+	2494	19	FSM	ENSG00000076242.16	ENST00000231790.8	2494	19	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_10	50.3496723541756	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTATTTAATTTTATTA	36990255	True	NA	20	True	AATAAA	-20	NA	36993517	37050846	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_36993664_36996618_36996710_37000954_37001054_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37014431_37014545_37017505_37017600_37020309_37020464_37025636_37026008_37028783_37028933_37040185_37040295_37042267_37042332_37047518_37047684_37048516_37048610_37048903_37049018_37050485
transcript_142145.known	chr3	+	2428	19	FSM	ENSG00000076242.16	ENST00000435176.5	2428	19	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	105.564093221975	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCTTATTTAATTTTAT	36993279	True	NA	18	True	AATAAA	-18	NA	36993803	37050844	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_36993891_36996618_36996710_37000954_37001049_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37014431_37014545_37017505_37017600_37020309_37020464_37025636_37026008_37028783_37028933_37040185_37040295_37042267_37042332_37047518_37047684_37048516_37048610_37048903_37049018_37050485
transcript_142147.known	chr3	+	2205	18	FSM	ENSG00000076242.16	ENST00000673673.1	2205	18	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_15	87.6017253468048	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACACAGTGGATTGATTA	36990332	False	NA	-27	True	NA	NA	NA	36993594	37050799	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_36993664_36996618_36996710_37000954_37001054_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37014431_37014545_37017505_37017600_37020309_37020464_37025636_37026008_37028783_37028933_37040185_37040295_37042267_37042332_37048516_37048610_37048903_37049018_37050485
transcript_142154.known	chr3	+	2280	18	FSM	ENSG00000076242.16	ENST00000539477.6	2280	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	109.261566735051	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGATAGTATTCCTTTATA	36993279	True	NA	-43	True	NA	NA	NA	36993803	37050783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_36993891_36996618_36996710_37000954_37001054_37004400_37004475_37006990_37007064_37011819_37011863_37012010_37012100_37014431_37014545_37017505_37017600_37020309_37020464_37025636_37026008_37028783_37028933_37040185_37040295_37042267_37042332_37047518_37047684_37048516_37048610_37048903_37049018_37050485
transcript_142159.known	chr3	+	2183	17	FSM	ENSG00000076242.16	ENST00000413212.2	2183	17	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	110.884230168225	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATAGATGTGTCTTAACA	36993260	True	NA	-3	True	TATAAA	-1	NA	36993784	37050823	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_36993891_36996618_36996710_37000954_37001054_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37014431_37014545_37025636_37026008_37028783_37028933_37040185_37040295_37042267_37042332_37047518_37047684_37048516_37048610_37048903_37049018_37050485
transcript_14216.known	chr1	-	1164	8	FSM	ENSG00000143545.10	ENST00000368575.5	1164	8	0	0	0	0	multi-exon	FALSE	canonical	3	647	junction_3	24.4114392723358	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTGTTTTGGGTAACTT	-153973819	True	NA	-22	True	ATTAAA	-20	NA	153986339	153981649	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153982177_153982390_153982445_153982534_153982601_153982718_153982809_153983218_153983297_153983520_153983582_153984720_153984782_153986112
transcript_142161.known	chr3	+	1978	16	FSM	ENSG00000076242.16	ENST00000673715.1	1978	16	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_10	26.2470315781931	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGTGGCTCATGGCTGTA	36990260	True	NA	12	True	AATAAA	-14	NA	36993522	37047740	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_36993664_36996618_36996710_37000954_37001054_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37014431_37014545_37017505_37017600_37020309_37020464_37025636_37026008_37028783_37028933_37040185_37040295_37042267_37042332_37047518
transcript_142165.known	chr3	+	1712	15	FSM	ENSG00000076242.16	ENST00000673899.1	1712	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	97.0129646290765	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTATACTTGCCTTCTG	36990226	True	NA	-59	True	NA	NA	NA	36993488	37050767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_36993664_36996618_36996710_37000954_37001054_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37028783_37028933_37040185_37040295_37042267_37042332_37047518_37047684_37048516_37048610_37048903_37049018_37050485
transcript_142171.known	chr3	+	1495	4	FSM	ENSG00000076242.16	ENST00000673741.1	1495	4	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_1	36.0585942907127	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTCTTATTTAATTTTA	37046741	False	NA	17	True	AATAAA	-17	NA	37046753	37050843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_37047684_37048516_37048610_37048903_37049018_37050485
transcript_142178.known	chr3	-	1989	15	FSM	ENSG00000093167.18	ENST00000440230.5	1989	15	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_14	46.9322133833599	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCATTAAAACAGCCACCT	-37173342	True	NA	-37	True	NA	NA	NA	37176308	37053749	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_37053962_37054410_37054516_37055085_37055166_37058789_37058911_37063741_37063792_37065809_37065943_37075023_37075117_37083635_37083807_37091466_37091539_37094791_37094909_37096615_37096661_37129062_37129150_37148893_37149039_37174538_37174606_37175817
transcript_142179.known	chr3	-	2522	15	FSM	ENSG00000093167.18	ENST00000421276.6	2522	15	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_9	39.4202889851593	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTACTGACATGTTCAT	-37173371	True	NA	0	True	ATTAAA	-23	NA	37176337	37053003	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_37053962_37054410_37054516_37055085_37055166_37058789_37058911_37063741_37063792_37065809_37065943_37075023_37075117_37083635_37083807_37091466_37091539_37094791_37094909_37096615_37096661_37129062_37129150_37148893_37149039_37174538_37174606_37176059
transcript_142185.nic	chr3	-	2725	14	NIC	ENSG00000093167.18	novel	2522	15	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_13	37.7106705662497	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTACTGACATGTTCAT	-37173404	True	NA	0	True	ATTAAA	-23	NA	37176370	37053003	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_37053962_37054410_37054516_37055085_37055166_37058789_37058911_37063741_37063792_37065809_37065943_37075023_37075117_37083635_37083807_37094791_37094909_37096615_37096661_37129062_37129150_37148893_37149039_37174538_37174606_37175817
transcript_142186.known	chr3	-	2821	14	FSM	ENSG00000093167.18	ENST00000354379.8	2821	14	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_8	22.646498743193	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAATAAAATCTCTAATAT	-37173394	True	NA	-37	True	AATAAA	-28	NA	37176360	37052655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_37053962_37054410_37054516_37055085_37055166_37058789_37058911_37063741_37063792_37065809_37065943_37075023_37075117_37083635_37083807_37094791_37094909_37096615_37096661_37129062_37129150_37148893_37149039_37174538_37174606_37176059
transcript_142200.known	chr3	-	409	3	FSM	ENSG00000093167.18	ENST00000496825.2	409	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	73.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTCATTAGTTCATTAT	-37173178	False	NA	20	True	NA	NA	NA	37176144	37172769	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_37173027_37174538_37174606_37176059
transcript_142209.nic	chr3	+	2102	15	ISM	ENSG00000144674.17	ENST00000356847.8	7673	23	-2	43124	-2	0	5prime_fragment	FALSE	canonical	3	77	junction_4	20.3766823519794	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCTTACAAGAAAACAAAAAT	37238525	True	NA	NA	False	NA	NA	NA	37243249	37323621	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_37243623_37251394_37251485_37273535_37273602_37281957_37282273_37286013_37286062_37289234_37289292_37294978_37295078_37296086_37296220_37298832_37299021_37299287_37299372_37302184_37302333_37315419_37315599_37319062_37319195_37321730_37321887_37323587
transcript_142211.nic	chr3	+	2328	15	ISM	ENSG00000144674.17	ENST00000356847.8	7673	23	0	42896	0	228	5prime_fragment	FALSE	canonical	3	77	junction_4	20.3766823519794	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTGTTGAAAGACAAAGAG	37238527	True	NA	37	True	AAAAAG	-4	NA	37243251	37323849	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_37243623_37251394_37251485_37273535_37273602_37281957_37282273_37286013_37286062_37289234_37289292_37294978_37295078_37296086_37296220_37298832_37299021_37299287_37299372_37302184_37302333_37315419_37315599_37319062_37319195_37321730_37321887_37323587
transcript_142213.nic	chr3	+	3159	15	ISM	ENSG00000144674.17	ENST00000356847.8	7673	23	-48	42113	13	-327	5prime_fragment	FALSE	canonical	3	77	junction_4	20.3766823519794	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAGAGAAGGACAGAAGAAA	37243158	False	NA	19	True	NA	NA	NA	37243203	37324632	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_37243623_37251394_37251485_37273535_37273602_37281957_37282273_37286013_37286062_37289234_37289292_37294978_37295078_37296086_37296220_37298832_37299021_37299287_37299372_37302184_37302333_37315419_37315599_37319062_37319195_37321730_37321887_37323587
transcript_142214.nic	chr3	+	3241	15	ISM	ENSG00000144674.17	ENST00000356847.8	7673	23	-12	41995	-7	-209	5prime_fragment	FALSE	canonical	3	77	junction_4	20.3766823519794	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGGAAAAAGTTAAGCAGA	37238515	True	NA	NA	False	AAGAAA	-5	NA	37243239	37324750	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_37243623_37251394_37251485_37273535_37273602_37281957_37282273_37286013_37286062_37289234_37289292_37294978_37295078_37296086_37296220_37298832_37299021_37299287_37299372_37302184_37302333_37315419_37315599_37319062_37319195_37321730_37321887_37323587
transcript_142235.nic	chr3	+	1919	12	ISM	ENSG00000144674.17	ENST00000356847.8	7673	23	-233	51239	-172	0	5prime_fragment	FALSE	canonical	3	77	junction_4	22.3214680046877	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAACTATCGAAAAAACA	37242988	False	NA	NA	False	AAAACA	-44	NA	37243018	37315506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_37243623_37251394_37251485_37273535_37273602_37281957_37282273_37286013_37286062_37289234_37289292_37294978_37295078_37296086_37296220_37298832_37299021_37299287_37299372_37302184_37302333_37315419
transcript_142236.nic	chr3	+	1498	11	ISM	ENSG00000144674.17	ENST00000356847.8	7673	23	17	64497	-1	7171	5prime_fragment	FALSE	canonical	3	77	junction_4	23.3623628941937	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTCAACTCCGTAGTCGC	37238544	True	NA	NA	False	AAGAAA	-1	NA	37243268	37302248	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_37243623_37251394_37251485_37273535_37273602_37281957_37282273_37286013_37286062_37289234_37289292_37294978_37295078_37296086_37296220_37298832_37299021_37299287_37299372_37302184
transcript_142238.known	chr3	+	1617	11	FSM	ENSG00000144674.17	ENST00000450863.6	1617	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	47.8748368143433	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAACTATCGAAAAAACA	37238545	True	NA	NA	False	AAAACA	-44	NA	37243269	37315506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_37243623_37251394_37251485_37273535_37273602_37281957_37282273_37289234_37289292_37294981_37295078_37296086_37296220_37298832_37299021_37299287_37299372_37302184_37302333_37315419
transcript_142257.known	chr3	-	2389	1	FSM	ENSG00000270194.1	ENST00000604992.1	2389	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCTTCCCCATCCACCTA	-37244144	True	NA	NA	False	AATAAA	-39	NA	37244177	37241788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_37241800_37244200
transcript_142258.known	chr3	+	7860	28	FSM	ENSG00000144668.12	ENST00000264741.10	7860	28	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_6	5.00397647089412	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGAAGTTCAATCTGTAA	37451884	True	NA	5	True	AATAAA	-17	NA	37452140	37823507	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_37452560_37471006_37471135_37473353_37473461_37481483_37481608_37494500_37494569_37503177_37503308_37505999_37506086_37508558_37508628_37513762_37513901_37517503_37517610_37519259_37519355_37523520_37523612_37526025_37526072_37533313_37533469_37542424_37542586_37629186_37629337_37653713_37653791_37683864_37684016_37732711_37732799_37736903_37736984_37741729_37741820_37743925_37744035_37750461_37750570_37777391_37777518_37779901_37780022_37784976_37785079_37803822_37803943_37818890
transcript_142265.known	chr3	+	4753	8	FSM	ENSG00000144677.15	ENST00000273179.10	4753	8	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	30.8901939397061	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTGTGGATTGACTAC	37860172	True	NA	15	True	AATAAA	-15	NA	37861879	37984469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_37862279_37947056_37947212_37957110_37957144_37964570_37964673_37967825_37967883_37971406_37971500_37975708_37975895_37980741
transcript_142266.known	chr3	+	4640	7	FSM	ENSG00000144677.15	ENST00000443503.6	4640	7	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	22.6672794034828	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTGTGGATTGACTAC	37860252	True	NA	15	True	AATAAA	-15	NA	37861959	37984469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_37862279_37947056_37947212_37964570_37964673_37967825_37967883_37971406_37971500_37975708_37975895_37980741
transcript_142267.nic	chr3	+	2597	3	ISM	ENSG00000144677.15	ENST00000447745.5	793	7	4836	3343	4836	0	internal_fragment	FALSE	canonical	3	115	junction_1	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATAGAAAAAAAAAAAAAAAA	37969460	False	NA	NA	False	AAAAAG	-7	NA	37969472	37981125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_37971500_37975708_37975895_37980741
transcript_142268.known	chr3	+	2831	20	FSM	ENSG00000136059.16	ENST00000383759.7	2831	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.79823995472317	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGCTGTGGTATGCGTGCT	37990775	True	NA	6	True	AGTAAA	-16	NA	37990785	38007185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_37990830_37993586_37993733_37993897_37993973_37994260_37994467_37995738_37995848_37997076_37997188_37997482_37997686_37998089_37998169_37998265_37998365_37998911_37999051_37999338_37999440_38001455_38001594_38001701_38001861_38002395_38002576_38003167_38003314_38004254_38004400_38005791_38005975_38006180_38006253_38006448_38006701_38006941
transcript_142271.nic	chr3	+	2691	17	ISM	ENSG00000136059.16	ENST00000383759.7	2831	20	3349	1	-18	0	3prime_fragment	FALSE	canonical	2	7	junction_6	4.76928650324134	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGCTGTGGTATGCGTGC	37993885	True	NA	5	True	AGTAAA	-15	NA	37994134	38007184	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_37994467_37995738_37995848_37997076_37997188_37997482_37997686_37998089_37998169_37998265_37998365_37998911_37999051_37999338_37999440_38001455_38001594_38001701_38001861_38002395_38002576_38003167_38003314_38004254_38004400_38005791_38005975_38006180_38006253_38006448_38006701_38006941
transcript_142286.known	chr3	-	2963	15	FSM	ENSG00000187091.14	ENST00000463876.5	2963	15	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_14	17.6804111596849	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTTGTGGTCTCTTTAC	-38023960	False	NA	-3	True	TATAAA	-16	NA	38024787	38007497	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_38007859_38008013_38008164_38008234_38008368_38008457_38008637_38009041_38009159_38009271_38009432_38009652_38009812_38009903_38010054_38010130_38010276_38010360_38010563_38011213_38011446_38011543_38011674_38016490_38016720_38020187_38020353_38024336
transcript_142287.known	chr3	-	2651	15	FSM	ENSG00000187091.14	ENST00000334661.5	2651	15	0	0	0	0	multi-exon	TRUE	canonical	3	49	junction_14	12.318270816895	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTGGTCTCTTTACCT	-38028815	True	NA	-1	True	TATAAA	-18	NA	38029642	38007495	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_38007859_38008013_38008164_38008234_38008368_38008457_38008637_38009041_38009159_38009271_38009432_38009652_38009812_38009903_38010054_38010130_38010276_38010360_38010563_38011213_38011446_38011543_38011674_38016490_38016720_38020187_38020353_38029505
transcript_142292.known	chr3	-	1699	12	FSM	ENSG00000060971.19	ENST00000333167.13	1699	12	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_4	40.4814006878825	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTAGTGGCTGTGGTTTTT	-38132972	True	NA	-7	True	AGTAAA	-15	NA	38137127	38122714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_38123123_38125564_38125711_38125825_38125882_38126161_38126342_38126509_38126701_38127785_38127867_38129289_38129389_38131595_38131639_38131925_38132006_38133951_38134010_38136591_38136686_38136864
transcript_142296.nic	chr3	-	1787	11	NIC	ENSG00000060971.19	novel	1699	12	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_7	56.3173152769199	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTAGTGGCTGTGGTTTTT	NA	False	NA	-7	True	AGTAAA	-15	NA	38137258	38122714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_38123123_38125564_38125711_38125825_38125882_38126161_38126342_38126509_38126701_38127785_38127867_38129289_38129389_38131925_38132006_38133951_38134010_38136591_38136686_38136864
transcript_1423.known	chr1	-	1413	3	FSM	ENSG00000162585.17	ENST00000400919.7	1413	3	0	0	0	0	multi-exon	TRUE	canonical	3	58	junction_1	44	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTTGACTGCCAAGTGT	-2181872	True	NA	-4	True	AATGAA	-32	NA	2194775	2184460	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_2185514_2193638_2193911_2194687
transcript_142300.nic	chr3	-	1894	11	NIC	ENSG00000060971.19	novel	1699	12	NA	NA	-17	0	intron_retention	FALSE	canonical	3	143	junction_6	40.13838561776	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTAGTGGCTGTGGTTTTT	-38132999	True	NA	-7	True	AGTAAA	-15	NA	38137154	38122714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_38123123_38125564_38125711_38125825_38125882_38126161_38126701_38127785_38127867_38129289_38129389_38131595_38131639_38131925_38132006_38133951_38134010_38136591_38136686_38136864
transcript_142302.nic	chr3	-	1551	11	NIC	ENSG00000060971.19	novel	1699	12	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_3	63.878321831432	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTAGTGGCTGTGGTTTTT	-38133004	True	NA	-7	True	AGTAAA	-15	NA	38137159	38122714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_38123123_38125564_38125711_38125825_38125882_38126509_38126701_38127785_38127867_38129289_38129389_38131595_38131639_38131925_38132006_38133951_38134010_38136591_38136686_38136864
transcript_142303.known	chr3	-	1612	10	FSM	ENSG00000060971.19	ENST00000625927.3	1612	10	0	0	0	0	multi-exon	TRUE	canonical	3	6	junction_8	79.6377601361702	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGCTGTGGTTTTTTTCC	-38132982	True	NA	-3	True	AGTAAA	-19	NA	38137137	38122710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_38123123_38125564_38125711_38125825_38125882_38126161_38126342_38126509_38126701_38127785_38127867_38129289_38129389_38131925_38132006_38136591_38136686_38136864
transcript_142305.known	chr3	-	1944	10	FSM	ENSG00000060971.19	ENST00000411549.5	1944	10	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_6	58.0308559898403	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTGTGGTTTTTTTCCA	NA	False	NA	-2	True	AGTAAA	-20	NA	38137242	38122709	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_38123123_38125564_38125711_38125825_38125882_38126161_38126701_38127785_38127867_38129289_38129389_38131925_38132006_38133951_38134010_38136591_38136686_38136864
transcript_142307.nic	chr3	-	1449	10	NIC	ENSG00000060971.19	novel	1699	12	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_3	76.6871148254184	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTAGTGGCTGTGGTTTTT	-38132945	True	NA	-7	True	AGTAAA	-15	NA	38137100	38122714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_38123123_38125564_38125711_38125825_38125882_38126509_38126701_38127785_38127867_38129289_38129389_38131925_38132006_38133951_38134010_38136591_38136686_38136864
transcript_142308.nic	chr3	-	2172	10	NIC	ENSG00000060971.19	novel	1699	12	NA	NA	-15	0	intron_retention	FALSE	canonical	3	143	junction_5	41.7278069941761	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTAGTGGCTGTGGTTTTT	-38132997	True	NA	-7	True	AGTAAA	-15	NA	38137152	38122714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_38123123_38125564_38125711_38125825_38126701_38127785_38127867_38129289_38129389_38131595_38131639_38131925_38132006_38133951_38134010_38136591_38136686_38136864
transcript_142315.nic	chr3	-	2137	9	NIC	ENSG00000060971.19	novel	1699	12	NA	NA	-23	0	intron_retention	FALSE	canonical	3	53	junction_5	61.3407490987842	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTAGTGGCTGTGGTTTTT	-38133005	True	NA	-7	True	AGTAAA	-15	NA	38137160	38122714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_38123123_38125564_38125711_38125825_38126701_38127785_38127867_38129289_38129389_38131925_38132006_38133951_38134010_38136591_38136686_38136864
transcript_142322.known	chr3	+	2667	5	FSM	ENSG00000172936.16	ENST00000650905.2	2667	5	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_3	13.3111795119741	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTGTGTGTTGAGTGG	38137063	True	NA	6	True	AATAAA	-20	NA	38138660	38143022	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_38139029_38139863_38139999_38140387_38140569_38140756_38140849_38141131
transcript_142324.known	chr3	+	2691	5	FSM	ENSG00000172936.16	ENST00000421516.3	2691	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	61.9288906730938	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTGTGTGTTGAGTGG	38137063	True	NA	6	True	AATAAA	-20	NA	38138660	38143022	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_38139029_38139863_38139999_38140387_38140593_38140756_38140849_38141131
transcript_142325.known	chr3	+	2839	4	FSM	ENSG00000172936.16	ENST00000652590.1	2839	4	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	9.80929264637478	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTACCTTGGAAACTTG	38137063	True	NA	-10	True	AATAAA	-4	NA	38138660	38143006	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_38139029_38139863_38139999_38140387_38140849_38141131
transcript_142326.known	chr3	+	2483	4	FSM	ENSG00000172936.16	ENST00000651800.2	2483	4	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_2	67.3844690315704	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTGTGTGTGTTGAG	38137063	True	NA	3	True	AATAAA	-17	NA	38138660	38143019	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_38139029_38139863_38139999_38140756_38140849_38141131
transcript_142327.known	chr3	+	2638	4	FSM	ENSG00000172936.16	ENST00000417037.8	2638	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	59.9017714447763	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTGTGTGTGTTGAG	38138539	False	NA	3	True	AATAAA	-17	NA	38138551	38143019	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_38139029_38140387_38140569_38140756_38140849_38141131
transcript_142329.known	chr3	+	2352	3	FSM	ENSG00000172936.16	ENST00000650112.2	2352	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	70.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTGTGTGTGTTGAG	38137059	True	NA	3	True	AATAAA	-17	NA	38138656	38143019	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_38139029_38140756_38140849_38141131
transcript_142335.known	chr3	+	4517	18	FSM	ENSG00000172939.9	ENST00000311806.8	4517	18	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_8	25.3951470720232	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTGGTGTATGGACGCT	38160929	True	NA	13	True	AATAAA	-13	NA	38165536	38255484	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_38165947_38183002_38183116_38190730_38190840_38198721_38198864_38216095_38216152_38221577_38221688_38223811_38223914_38224570_38224705_38229686_38229736_38230364_38230431_38236838_38236962_38242742_38242779_38246074_38246222_38247667_38247733_38249965_38250019_38251402_38251472_38252327_38252393_38252816
transcript_142344.nic	chr3	+	1270	9	ISM	ENSG00000172939.9	ENST00000446845.5	1908	15	-19	20450	-19	-964	5prime_fragment	FALSE	canonical	3	209	junction_8	31.6778215002231	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAGGTAGGAAATTCCAG	38160878	True	NA	4	True	NA	NA	NA	38165485	38229729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_38165947_38183002_38183116_38190730_38190840_38198721_38198864_38216095_38216152_38221577_38221688_38223811_38223914_38224570_38224705_38229686
transcript_142348.known	chr3	+	3667	19	FSM	ENSG00000093217.11	ENST00000207870.8	3667	19	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_18	6.62696511735701	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACCTTAAACTTTATCT	38346236	True	NA	NA	False	AATAAA	-27	NA	38346784	38414985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_38346926_38348549_38348633_38360338_38360409_38362936_38363018_38365198_38365286_38365607_38365737_38366807_38366874_38368184_38368258_38370055_38370175_38372654_38372737_38374461_38374503_38375143_38375260_38376116_38376233_38376917_38376992_38379245_38379343_38395504_38395564_38397071_38397160_38400890_38400986_38412935
transcript_142351.nnic	chr3	+	1837	11	NNC	ENSG00000114739.14	novel	5370	10	NA	NA	58	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	10.8944940222114	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGGAAAAAAAGTTGT	38454304	False	NA	-55	True	NA	NA	NA	38454376	38483374	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_38454685_38477286_38477495_38477860_38477971_38478140_38478293_38478374_38478519_38479127_38479272_38479677_38479827_38481350_38481466_38482197_38482337_38482429_38482561_38483137
transcript_142356.known	chr3	+	3076	6	FSM	ENSG00000157036.13	ENST00000287675.10	3076	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	10.7443008148506	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACATTGTTCTGCTCTTT	38495403	True	NA	6	True	GATAAA	-17	NA	38496339	38526303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_38496531_38497628_38497779_38501354_38501495_38503614_38503692_38506853_38506969_38523900
transcript_14236.nnic	chr1	-	2051	5	NNC	ENSG00000143570.19	novel	2038	4	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	799.780399547276	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTACAGTATCTGATTCG	-153963596	False	NA	-11	True	AATAAA	-16	NA	153963631	153959109	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_153960115_153960195_153960755_153962219_153962351_153962528_153962748_153963494
transcript_142360.nic	chr3	-	2619	12	ISM	ENSG00000183873.18	ENST00000413689.6	8519	28	-4	55134	-4	10832	5prime_fragment	FALSE	canonical	3	13	junction_2	10.6095232442874	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTATATTGTGTGTAATG	-38648308	True	NA	NA	False	AAAAAG	-7	NA	38649691	38603195	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_38604084_38604728_38604909_38605950_38606149_38606668_38606811_38608150_38608215_38609733_38609965_38613974_38614067_38620842_38620972_38622399_38622490_38630310_38630430_38633034_38633360_38649530
transcript_142366.nic	chr3	-	746	2	ISM	ENSG00000183873.18	ENST00000491944.1	1382	6	-73	18802	-59	281	5prime_fragment	FALSE	canonical	3	55	junction_1	0	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTGGTTTGGTGTAATG	-38648363	True	NA	-1	True	AATAAA	-22	NA	38649746	38632829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_38633360_38649530
transcript_142367.known	chr3	+	4212	29	FSM	ENSG00000168026.19	ENST00000683103.1	4212	29	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	3.58194879121089	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTATAGTGTATGTGGTT	39107548	True	NA	2	True	NA	NA	NA	39107679	39138900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_39107865_39109084_39109215_39110028_39110140_39110850_39111018_39112457_39112581_39114584_39114743_39118068_39118154_39119921_39120021_39120996_39121190_39125062_39125161_39125331_39125533_39126260_39126391_39128330_39128489_39128716_39128933_39129071_39129311_39130078_39130152_39130247_39130359_39130700_39130840_39130991_39131096_39133051_39133241_39134217_39134329_39135092_39135175_39136356_39136508_39136898_39137061_39137194_39137388_39137485_39137711_39138266_39138388_39138555_39138624_39138710
transcript_142375.nic	chr3	+	3664	20	NIC	ENSG00000114742.14	novel	3965	19	NA	NA	-24	-262	combination_of_known_junctions	FALSE	canonical	3	28	junction_19	51.4258738245152	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTACCAGCCCTCAGTT	39049036	True	NA	NA	False	AAGAAA	-8	NA	39051988	39096402	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_39052074_39063049_39063191_39065810_39065890_39066547_39066631_39066745_39066876_39068770_39068860_39069642_39069745_39074725_39074951_39077138_39077214_39078136_39078240_39079710_39079809_39084154_39084263_39084644_39084742_39085514_39085611_39088127_39088234_39089230_39089319_39091624_39091702_39093873_39094067_39094647_39095415_39095480
transcript_142380.known	chr3	+	3965	19	FSM	ENSG00000114742.14	ENST00000302313.10	3965	19	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_12	23.6489892248702	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAAAGTGTAGTACACAT	39049063	True	NA	12	True	AATAAA	-17	NA	39052015	39096664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_39052074_39063049_39063191_39065810_39065890_39066547_39066631_39066745_39066876_39068770_39068860_39069642_39069745_39074725_39074951_39077138_39077214_39078136_39078240_39079710_39079809_39084154_39084263_39084644_39084742_39085514_39085611_39088127_39088234_39089230_39089319_39091624_39091702_39093873_39094067_39094647
transcript_142388.nic	chr3	+	1900	18	ISM	ENSG00000114742.14	ENST00000302313.10	3965	19	-27	2673	-24	-1087	5prime_fragment	TRUE	canonical	3	190	junction_12	24.2893457783264	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAGGAGAACAGGAAAAAGA	39049036	True	NA	NA	False	AATGAA	-4	NA	39051988	39093991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_39052074_39063049_39063191_39065810_39065890_39066547_39066631_39066745_39066876_39068770_39068860_39069642_39069745_39074725_39074951_39077138_39077214_39078136_39078240_39079710_39079809_39084154_39084263_39084644_39084742_39085514_39085611_39088127_39088234_39089230_39089319_39091624_39091702_39093873
transcript_142398.known	chr3	-	2873	9	FSM	ENSG00000114745.14	ENST00000453680.5	2873	9	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	56.9526941856134	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTAACTAAAGCCTTTA	-39105152	True	NA	-25	True	AATAAA	-20	NA	39107569	39096664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_39098490_39098740_39098894_39099352_39099504_39100304_39100455_39100746_39100878_39101015_39101103_39102677_39102882_39103472_39103554_39107478
transcript_14240.known	chr1	-	2427	5	FSM	ENSG00000143570.19	ENST00000310483.10	2427	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	975.602474115354	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGTACAGTATCTGATT	-153960001	False	NA	-13	True	AATAAA	-14	NA	153967712	153959111	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153960755_153962219_153962351_153962528_153962748_153963596_153963704_153967385
transcript_142401.known	chr3	-	3046	9	FSM	ENSG00000114745.14	ENST00000319283.8	3046	9	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_4	18.3196445107431	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTCGAATTTTCTGGAA	-39105210	True	NA	0	True	AATACA	-25	NA	39107627	39096598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_39098490_39098740_39098894_39099352_39099504_39100304_39100504_39100746_39100878_39101015_39101103_39102677_39102882_39103472_39103554_39107478
transcript_142411.nnic	chr3	-	2909	9	NIC	ENSG00000114745.14	novel	2933	9	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_4	58.8885334763908	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTAACTAAAGCCTTTA	-39105229	True	NA	-25	True	AATAAA	-20	NA	39107646	39096664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_39098490_39098740_39098894_39099352_39099504_39100304_39100455_39100787_39100878_39101015_39101103_39102677_39102882_39103472_39103554_39107478
transcript_142421.nic	chr3	-	2816	8	NIC	ENSG00000114745.14	novel	2873	9	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	63.4652403658402	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTAACTAAAGCCTTTA	-39105226	True	NA	-25	True	AATAAA	-20	NA	39107643	39096664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_39098490_39098740_39098894_39099352_39099504_39100304_39100455_39101015_39101103_39102677_39102882_39103472_39103554_39107478
transcript_142423.known	chr3	-	3240	8	FSM	ENSG00000114745.14	ENST00000441302.6	3240	8	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_6	13.6007202690422	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAAAGCCTTTATTCTAT	-39105221	True	NA	-19	True	AATAAA	-26	NA	39107638	39096658	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_39098490_39098740_39098894_39099352_39099504_39100304_39100878_39101015_39101103_39102677_39102882_39103472_39103554_39107478
transcript_142428.known	chr3	-	1345	7	FSM	ENSG00000114745.14	ENST00000479927.5	1345	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	66.8995930896112	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGGCTTCCCAGGAGGCA	-39105223	True	NA	NA	False	NA	NA	NA	39107640	39098027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_39098490_39098740_39098894_39099352_39099504_39100304_39100504_39100746_39100878_39101015_39101103_39107478
transcript_142435.known	chr3	-	2933	9	FSM	ENSG00000114745.14	ENST00000452389.6	2933	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	58.2428911971238	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTAACTAAAGCCTTTA	-39105204	True	NA	-25	True	AATAAA	-20	NA	39107621	39096664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_39098490_39098740_39098894_39099352_39099504_39100304_39100504_39100787_39100878_39101015_39101103_39102677_39102882_39103472_39103554_39107478
transcript_142436.known	chr3	-	3164	5	FSM	ENSG00000144655.15	ENST00000273153.10	3164	5	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_4	13.0455931256497	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTGGTATGTATTTGT	-39153123	False	468	-2	True	AATAAA	-16	NA	39153591	39141854	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_39144045_39144136_39144452_39144996_39145257_39146477_39146723_39153437
transcript_142437.known	chr3	-	2593	5	FSM	ENSG00000144655.15	ENST00000514182.1	2593	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	12.1937483982572	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCCTTCTGCCCCACCC	-39154094	False	NA	NA	False	NA	NA	NA	39154562	39142337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_39144045_39144136_39144452_39144996_39145257_39146477_39146723_39154496
transcript_142438.nnic	chr3	-	3117	5	NNC	ENSG00000144655.15	novel	3164	5	NA	NA	-120	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	15.6104932657492	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTGGTATGTATTTGT	NA	False	NA	-2	True	AATAAA	-16	NA	39154682	39141854	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_39144045_39144136_39144452_39144996_39145257_39146477_39146723_39154575
transcript_142452.known	chr3	+	2101	7	FSM	ENSG00000144659.13	ENST00000650617.1	2101	7	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_6	22.2816566310098	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTGTTCAAAAAAGCAGC	39379781	True	NA	65	True	NA	NA	NA	39383369	39397351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_39383794_39389494_39389617_39390422_39390508_39391440_39391621_39391852_39392022_39394409_39394577_39396397
transcript_142476.known	chr3	+	1032	7	FSM	ENSG00000168028.14	ENST00000443003.2	1032	7	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_3	2152.16424017004	1164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTGTCTTCATTTAGT	39368055	True	NA	1	True	AATAAA	-12	NA	39406734	39412434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_39406765_39407620_39407787_39408605_39408740_39410753_39411000_39411648_39411778_39411895_39412062_39412273
transcript_142478.nic	chr3	+	1353	7	NIC	ENSG00000168028.14	novel	1140	7	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	266	junction_1	2032.5558349581	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTTCATTTAGTTTGC	39368041	True	NA	5	True	AATAAA	-16	NA	39406720	39412438	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_39407083_39407620_39407787_39408605_39408725_39410753_39411000_39411648_39411778_39411895_39412062_39412273
transcript_14248.known	chr1	-	912	4	FSM	ENSG00000143570.19	ENST00000417348.2	912	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_3	920.677407612943	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGAGCTGTGCCTGGCT	-153963227	False	NA	NA	False	GGGGCT	-33	NA	153963262	153960453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153960755_153962219_153962351_153962528_153962748_153963001
transcript_142487.known	chr3	-	1958	3	FSM	ENSG00000280739.4	ENST00000625390.2	1958	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTATTGGTCCTGTGTTATT	-40309324	True	NA	NA	False	TATAAA	-17	NA	40309542	40173144	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_40174723_40301236_40301397_40309322
transcript_142488.known	chr3	-	2031	3	FSM	ENSG00000280739.4	ENST00000661550.1	2031	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATTTTTGACTCAATAAA	-40309322	True	NA	NA	False	NA	NA	NA	40309540	40246818	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_40248472_40301236_40301397_40309322
transcript_142490.known	chr3	-	553	3	FSM	ENSG00000280739.4	ENST00000629217.2	553	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGCTGAACGTGTTCCT	-40309294	True	NA	NA	False	AAAAAG	-45	NA	40309512	40232856	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_40233060_40301236_40301397_40309322
transcript_142491.known	chr3	+	987	4	FSM	ENSG00000114784.4	ENST00000232905.4	987	4	0	0	0	0	multi-exon	FALSE	canonical	3	875	junction_1	28.3117564901148	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGTTCTCTCATTCTGC	40300074	True	NA	73	True	AGTAAA	-23	NA	40309706	40312424	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_40309973_40310892_40311057_40311469_40311572_40311969
transcript_142495.known	chr3	+	637	3	FSM	ENSG00000114784.4	ENST00000488260.1	637	3	0	0	0	0	multi-exon	FALSE	canonical	3	875	junction_1	9	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGTAAAGTATTCAAATAC	40300193	True	NA	NA	False	NA	NA	NA	40309825	40311795	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_40309973_40310892_40311057_40311469
transcript_142497.known	chr3	-	2201	3	FSM	ENSG00000223797.7	ENST00000420850.2	2201	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCTATAAAACAGAATAATAA	-40453253	False	NA	NA	False	CATAAA	-9	NA	40453329	40444932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_40446848_40451704_40451783_40453121
transcript_142498.known	chr3	+	2916	11	FSM	ENSG00000168032.10	ENST00000301825.8	2916	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1.85741756210067	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCCAGAGAGTTCAAAGT	40387121	True	NA	NA	False	AAGAAA	-22	NA	40387183	40428744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_40387262_40388045_40388098_40392022_40392151_40400893_40401012_40411811_40411963_40414680_40414841_40415839_40416074_40422849_40423123_40423290_40423402_40423825_40423964_40427271
transcript_142499.known	chr3	+	7072	6	FSM	ENSG00000188846.14	ENST00000338970.10	7072	6	0	0	0	0	multi-exon	FALSE	canonical	3	2862	junction_1	1004.99603979319	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTGTCATATTGTGAT	40349253	True	NA	10	True	AATAAA	-21	NA	40457291	40468587	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_40457364_40457889_40457992_40458641_40458737_40461406_40461507_40461607_40461662_40461938
transcript_1425.known	chr1	-	569	3	FSM	ENSG00000162585.17	ENST00000378543.2	569	3	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_2	610.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCTGCCGCTTTTCTTTCT	-2181847	True	NA	-5	True	ATTAAA	-40	NA	2194750	2189547	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_2189782_2193638_2193911_2194687
transcript_14250.known	chr1	-	2398	4	FSM	ENSG00000143570.19	ENST00000368621.5	2398	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	899.004758360909	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTACAGTATCTGATTC	-153963427	False	NA	-12	True	AATAAA	-15	NA	153963462	153959110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153960755_153962219_153962351_153962528_153962748_153963058
transcript_142501.known	chr3	+	966	6	FSM	ENSG00000188846.14	ENST00000435633.5	966	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	2122.01626760965	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGGTCAAAAAGCTCCAG	40349324	True	NA	NA	False	NA	NA	NA	40457362	40462168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_40457748_40457889_40457992_40458641_40458737_40461406_40461507_40461607_40461662_40461938
transcript_142503.known	chr3	+	812	6	FSM	ENSG00000188846.14	ENST00000416518.1	812	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2574.097822539	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTAAGCCTTTGGATT	40349315	True	NA	7	True	AATAAA	-25	NA	40457353	40462280	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_40457475_40457889_40457992_40458641_40458737_40461406_40461507_40461607_40461662_40461940
transcript_142504.nic	chr3	+	447	5	ISM	ENSG00000188846.14	ENST00000338970.10	7072	6	-26	6928	-26	189	5prime_fragment	FALSE	canonical	3	2862	junction_1	1094.53026454274	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAAGATTTAAGATCTGT	40457241	False	NA	NA	False	AAGAAA	-2	NA	40457265	40461659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_40457364_40457889_40457992_40458641_40458737_40461406_40461507_40461607
transcript_142507.known	chr3	+	7136	6	FSM	ENSG00000188846.14	ENST00000396203.7	7136	6	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_1	2064.74593110145	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTGTCATATTGTGAT	40349300	True	NA	10	True	AATAAA	-21	NA	40457338	40468587	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_40457475_40457889_40457992_40458641_40458737_40461406_40461507_40461607_40461662_40461938
transcript_142509.known	chr3	+	794	5	FSM	ENSG00000188846.14	ENST00000479563.5	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	4918	junction_3	250.022498987591	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCCTTTTTTTTTTTTTTT	40457849	False	NA	12	True	AATAAA	-14	NA	40457876	40462368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_40457992_40458641_40458737_40461406_40461507_40461607_40461662_40461938
transcript_14251.known	chr1	-	2322	4	FSM	ENSG00000143570.19	ENST00000621013.4	2322	4	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	885.341867428748	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGATTCGTTTGTTTTGGG	-153944724	True	NA	0	True	AATAAA	-27	NA	153963492	153959098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153960755_153962219_153962351_153962528_153962748_153963176
transcript_142512.known	chr3	+	4104	6	FSM	ENSG00000177873.14	ENST00000429348.6	4104	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	7.39188744503053	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGTCTATGGTATTCAG	40476138	True	NA	NA	False	AATAAA	-20	NA	40477112	40490236	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_40477358_40477917_40478004_40481862_40482017_40482587_40482705_40483652_40483724_40486805
transcript_142517.known	chr3	+	4841	5	FSM	ENSG00000177873.14	ENST00000432264.4	4841	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	3.76662979332984	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAATCTGTGATATTCTGT	40476147	True	NA	NA	False	AATAAA	-21	NA	40477121	40491053	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_40477358_40477917_40478004_40481862_40482017_40482587_40482705_40486805
transcript_142519.known	chr3	+	3291	5	FSM	ENSG00000177842.12	ENST00000314529.10	3291	5	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_3	8.5146931829632	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTTACCTATTATTAT	40503718	True	NA	NA	False	NA	NA	NA	40506038	40518736	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_40506139_40506303_40506377_40511469_40511597_40512401_40512516_40515859
transcript_142527.known	chr3	+	2022	3	FSM	ENSG00000177842.12	ENST00000418905.1	2022	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	2.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAAATCTTTATCTCCCA	40503719	True	NA	5	True	AATAAA	-21	NA	40506039	40517709	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_40506139_40506303_40506377_40515859
transcript_142531.nnic	chr3	+	2104	3	NNC	ENSG00000177842.12	novel	2022	3	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	10	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAAATCTTTATCTCCCA	40503699	True	NA	5	True	AATAAA	-21	NA	40506019	40517709	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_40506201_40506303_40506377_40515859
transcript_142533.known	chr3	+	8389	5	FSM	ENSG00000172888.12	ENST00000339296.10	8389	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	7.75806032459145	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTTTTTAAGAGACAAAG	40524007	True	NA	NA	False	CATAAA	-16	NA	40524959	40539782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_40525275_40525778_40525865_40529318_40529446_40530208_40530317_40532029
transcript_142535.known	chr3	+	2613	4	FSM	ENSG00000172888.12	ENST00000431278.5	2613	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	8.05536398239638	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGAATCTGTTGTGCA	40523945	True	NA	NA	False	AGTAAA	-21	NA	40524897	40534071	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_40525275_40525778_40525865_40530208_40530317_40532029
transcript_142536.known	chr3	-	4294	37	FSM	ENSG00000168038.11	ENST00000301831.9	4294	37	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	8.79827950352921	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTCAGCCTGCCAGCATC	-41960099	True	NA	-3	True	AATAAA	-20	NA	41962103	41246598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_41246993_41249488_41249575_41398078_41398265_41455496_41455596_41463086_41463254_41566024_41566131_41615668_41615718_41663606_41663700_41681507_41681653_41681752_41681805_41705056_41705152_41705253_41705306_41715236_41715294_41715446_41715569_41717727_41717862_41754360_41754489_41789660_41789844_41800131_41800294_41819422_41819507_41835863_41835972_41883873_41883953_41895517_41895565_41896821_41897004_41898431_41898493_41900724_41900830_41907844_41907942_41911316_41911387_41911540_41911660_41912806_41912900_41915976_41916053_41918456_41918541_41919716_41919819_41931843_41932007_41935800_41935941_41938097_41938198_41954621_41954808_41962015
transcript_14254.known	chr1	-	2038	4	FSM	ENSG00000143570.19	ENST00000356205.9	2038	4	0	0	0	0	multi-exon	FALSE	canonical	3	1301	junction_3	311.182690178401	3897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTACAGTATCTGATTCG	-153944769	True	NA	-11	True	AATAAA	-16	NA	153963537	153959109	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153960755_153962219_153962351_153962528_153962748_153963494
transcript_142545.known	chr3	-	647	4	FSM	ENSG00000168038.11	ENST00000414606.1	647	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	11.5758369027902	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTACTGAATTTGGCTGT	-41960126	True	NA	NA	False	NA	NA	NA	41962130	41937094	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_41937341_41938097_41938198_41954621_41954808_41962015
transcript_142547.known	chr3	+	2770	17	FSM	ENSG00000168036.18	ENST00000646116.1	2770	17	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	446.693892496584	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCTTGCTTGTTAAATTT	41173010	True	NA	NA	False	NA	NA	NA	41199524	41239904	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_41199671_41224020_41224082_41224189_41224322_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133_41239355_41239818
transcript_142551.known	chr3	+	3321	16	FSM	ENSG00000168036.18	ENST00000644678.1	3321	16	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	451.473833374895	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGAATTTATCAAACCCT	41199283	True	NA	NA	False	NA	NA	NA	41199418	41239885	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_41199671_41224020_41224082_41224189_41224322_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133
transcript_142552.known	chr3	+	3472	16	FSM	ENSG00000168036.18	ENST00000396185.8	3472	16	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_15	216.184016265979	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGTCACTCTTTCTTT	41199376	False	NA	26	True	ATTAAA	-15	NA	41199388	41240443	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_41199671_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133_41239355_41239659
transcript_142553.known	chr3	+	2778	16	FSM	ENSG00000168036.18	ENST00000645982.1	2778	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_15	342.131709531091	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACTGACTTTGCTTGCTT	41172927	True	NA	NA	False	NA	NA	NA	41199441	41239955	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_41199671_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133_41239355_41239812
transcript_142554.known	chr3	+	2784	16	FSM	ENSG00000168036.18	ENST00000647390.1	2784	16	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	377.938701672933	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTAGCCTTGCTTGTTAA	41172971	True	NA	NA	False	NA	NA	NA	41199485	41239900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_41199623_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133_41239355_41239659
transcript_142557.known	chr3	+	2890	16	FSM	ENSG00000168036.18	ENST00000642315.1	2890	16	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	369.393821761485	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCTTGCTTGTTAAATTT	41199433	True	NA	NA	False	NA	NA	NA	41200142	41239904	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_41200382_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133_41239355_41239659
transcript_142558.known	chr3	+	2764	16	FSM	ENSG00000168036.18	ENST00000450969.6	2764	16	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	343.708183719206	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGCTTGTTAAATTTTT	41199402	True	NA	NA	False	NA	NA	NA	41200111	41239906	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_41200382_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133_41239355_41239818
transcript_142559.known	chr3	+	3086	15	FSM	ENSG00000168036.18	ENST00000644873.1	3086	15	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_10	350.073141045743	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCTTGCTTGTTAAATTT	41173023	True	NA	NA	False	NA	NA	NA	41199537	41239904	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_41199671_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235726_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133
transcript_142561.known	chr3	+	3283	15	FSM	ENSG00000168036.18	ENST00000643297.1	3283	15	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	335.536769176476	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGCTTGCTTTGAAG	41199401	True	NA	NA	False	NA	NA	NA	41200110	41239960	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_41200382_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133
transcript_142565.known	chr3	+	2777	13	FSM	ENSG00000168036.18	ENST00000644138.1	2777	13	0	0	0	0	multi-exon	FALSE	canonical	3	1199	junction_2	52.3800216367526	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGGTACACAGACATACA	41172990	True	NA	NA	False	AATAAA	-42	NA	41199504	41237196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_41199671_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587
transcript_142572.known	chr3	+	3384	17	FSM	ENSG00000182606.17	ENST00000673621.2	3384	17	0	0	0	0	multi-exon	TRUE	canonical	2	14	junction_15	46.4919347844333	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGGAGGGGGGCCGGTT	42013791	False	NA	NA	False	NA	NA	NA	42013801	42223737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_42014118_42087103_42087401_42125419_42125615_42176813_42176891_42184684_42184802_42188044_42188146_42189015_42189125_42191557_42191637_42193074_42193206_42193823_42193899_42194803_42194942_42199176_42199254_42200817_42201055_42202435_42202753_42209766_42209986_42219493_42219597_42222941
transcript_142576.nnic	chr3	+	4222	15	NNC	ENSG00000182606.17	novel	5033	15	NA	NA	-16	-23	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	34.3445923022557	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCAGTCATAGTGTGTCT	42157835	True	NA	14	True	AATAAA	-18	NA	42160152	42225125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_42160474_42176813_42176891_42184684_42184802_42188044_42188146_42189015_42189125_42191557_42191637_42193074_42193206_42193823_42193899_42194803_42194942_42199176_42199254_42200817_42201055_42202435_42202753_42209766_42209923_42219493_42219597_42222941
transcript_142577.nnic	chr3	+	4868	15	NNC	ENSG00000182606.17	novel	5033	15	NA	NA	-16	-118	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	34.3445923022557	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACACTGGTATTCTGATTT	42157835	True	NA	20	True	AATAAA	-21	NA	42160152	42225771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_42160474_42176813_42176891_42184684_42184802_42188044_42188146_42189015_42189125_42191557_42191637_42193074_42193206_42193823_42193899_42194803_42194942_42199176_42199254_42200817_42201055_42202435_42202753_42209766_42209923_42219493_42219597_42222941
transcript_142578.known	chr3	+	5033	15	FSM	ENSG00000182606.17	ENST00000396175.5	5033	15	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_13	49.9635070908391	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATACTGTTACATGCCTTC	42157851	True	NA	NA	False	ATTAAA	-18	NA	42160168	42225889	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_42160474_42176813_42176891_42184684_42184802_42188044_42188146_42189015_42189125_42191557_42191637_42193074_42193206_42193823_42193899_42194803_42194942_42199176_42199254_42200817_42201055_42202435_42202753_42209766_42209986_42219493_42219597_42222941
transcript_142580.nnic	chr3	+	5069	15	NNC	ENSG00000182606.17	novel	5033	15	NA	NA	-16	-118	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_13	49.5669512181375	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACACTGGTATTCTGATTT	42157835	True	NA	20	True	AATAAA	-21	NA	42160152	42225771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_42160474_42176813_42176891_42184684_42184802_42188044_42188146_42189015_42189125_42191557_42191637_42193074_42193206_42193823_42193899_42194803_42194942_42199176_42199254_42200817_42201055_42202435_42202753_42209766_42210124_42219493_42219597_42222941
transcript_142585.known	chr3	+	4620	13	FSM	ENSG00000182606.17	ENST00000341421.7	4620	13	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	34.1906419945575	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGATTATAGTTTTACTTT	42157851	True	NA	NA	False	ATTAAA	-20	NA	42160168	42212623	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_42160474_42176813_42176891_42184684_42184802_42188044_42188146_42189015_42189125_42191557_42191637_42193074_42193206_42193823_42193899_42194803_42194942_42199176_42199254_42200817_42201055_42202435_42202753_42209766
transcript_142591.known	chr3	-	830	3	FSM	ENSG00000187094.12	ENST00000334681.9	830	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	2	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCGTTCCCTGCGTCTA	-42264763	True	NA	0	True	ATTAAA	-16	NA	42264903	42257824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_42258232_42263416_42263633_42264696
transcript_142594.known	chr3	+	2754	13	FSM	ENSG00000114812.13	ENST00000325123.5	2754	13	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	3.51188458428425	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTTGGTTCCCCTGGTG	42502324	True	NA	10	True	AATAAA	-13	NA	42502642	42537568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_42502814_42513748_42513855_42519222_42519331_42525886_42525994_42527392_42527497_42527990_42528124_42530778_42530933_42531470_42531532_42531802_42531870_42532241_42532334_42534974_42535105_42535342_42535385_42536089
transcript_142601.known	chr3	+	2681	12	FSM	ENSG00000114812.13	ENST00000543411.5	2681	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.66445051213018	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTCCCCTGGTGGTTGA	42502293	True	NA	15	True	AATAAA	-18	NA	42502611	42537573	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_42502814_42519222_42519331_42525886_42525994_42527395_42527497_42527990_42528124_42530778_42530933_42531470_42531532_42531802_42531870_42532241_42532334_42534974_42535105_42535342_42535385_42536089
transcript_14262.known	chr1	-	520	4	FSM	ENSG00000143543.15	ENST00000428469.1	520	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	513.847145451728	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTACATTCCACCCTTGT	-153964874	False	NA	NA	False	NA	NA	NA	153977394	153974681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153974836_153975825_153975906_153976692_153976923_153977338
transcript_14264.known	chr1	-	2022	3	FSM	ENSG00000143570.19	ENST00000537590.5	2022	3	0	0	0	0	multi-exon	FALSE	canonical	2	40	junction_1	630.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGATTCGTTTGTTTTGGG	-153963606	False	NA	0	True	AATAAA	-27	NA	153963641	153959098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153960755_153962528_153962748_153963494
transcript_142646.known	chr3	-	1608	7	FSM	ENSG00000093183.14	ENST00000273156.11	1608	7	0	0	0	0	multi-exon	TRUE	canonical	3	115	junction_1	35.8406969178273	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGTGTCTTTGCACTTA	-42582012	False	NA	-24	True	AATAAA	-16	NA	42582028	42547970	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_42548658_42555929_42555996_42557577_42557697_42561116_42561297_42563522_42563687_42568864_42569074_42581845
transcript_142647.known	chr3	-	6340	7	FSM	ENSG00000093183.14	ENST00000264454.8	6340	7	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	50.7195447753844	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTCTTTGCACTTATG	-42579868	True	NA	-22	True	AATAAA	-18	NA	42581967	42547968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_42553449_42555929_42555996_42557577_42557697_42561116_42561297_42563522_42563687_42568864_42569074_42581845
transcript_142652.known	chr3	+	2335	6	FSM	ENSG00000114857.19	ENST00000487466.5	2335	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_5	18.3477519058875	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAAAAAACTTTCTGC	42592224	True	NA	NA	False	NA	NA	NA	42600671	42627310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_42600779_42600983_42601065_42617569_42617645_42619019_42619128_42619663_42621517_42627199
transcript_142653.known	chr3	+	7964	12	FSM	ENSG00000114857.19	ENST00000468735.6	7964	12	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	24.8888437950529	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGAGGTGAAGAAAAATCCA	42592207	True	NA	NA	False	AATAAA	-12	NA	42600654	42638226	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_42600779_42600983_42601065_42617569_42617645_42619019_42619709_42620015_42621517_42627199_42630576_42631170_42631317_42632600_42632824_42633579_42633736_42634612_42634701_42635220_42635367_42636867
transcript_142654.known	chr3	+	5498	6	FSM	ENSG00000114853.15	ENST00000680014.1	5498	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	5.16139516022558	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTGGCCCAGCCTCTTC	42654195	True	NA	4	True	AATAAA	-17	NA	42654504	42667580	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_42654696_42658274_42659829_42661484_42661633_42663011_42663128_42663796_42663942_42664236
transcript_142666.nnic	chr3	+	967	4	Fusion	ENSG00000008324.12_ENSG00000289558.1	novel	2697	3	NA	NA	-61	-120	multi-exon	FALSE	canonical	3	41	junction_1	542.224020944193	458	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGATGTGGAGGTATAGA	42580701	True	NA	17	True	AATAAA	-19	NA	42582076	42594994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr3_+_42582236_42590808_42590967_42591524_42591602_42594421
transcript_142670.known	chr3	+	894	4	FSM	ENSG00000114857.19	ENST00000460807.2	894	4	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	12.2836838484589	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAGGTTAAGCATAA	42633194	True	NA	NA	False	CATAAA	-13	NA	42633208	42637000	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_42633736_42634612_42634701_42635220_42635367_42636867
transcript_142675.known	chr3	-	585	4	FSM	ENSG00000181061.14	ENST00000452906.3	585	4	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_3	1443.72904506197	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGTTGGAGGAGCTTGC	-42778431	True	NA	-115	True	NA	NA	NA	42804433	42785251	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_42785321_42786027_42786163_42794156_42794276_42804171
transcript_142676.known	chr3	-	2722	4	FSM	ENSG00000181061.14	ENST00000321331.12	2722	4	0	0	0	0	multi-exon	FALSE	canonical	3	2432	junction_3	336.14679333093	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTAAAGTCATGTGACATT	-42778488	True	NA	-4	True	ATTAAA	-17	NA	42804490	42782907	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_42785321_42786027_42786163_42794156_42794276_42804435
transcript_142677.known	chr3	-	1322	4	FSM	ENSG00000181061.14	ENST00000418900.6	1322	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	1460.20363876641	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGTTATTAAAGTAAGTG	-42778486	True	NA	-44	True	NA	NA	NA	42804488	42784329	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_42785321_42786027_42786163_42794156_42794300_42804435
transcript_142681.known	chr3	-	983	3	FSM	ENSG00000181061.14	ENST00000470543.1	983	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	1580	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATTTTTTCCATAAGAAT	-42778486	True	NA	-1	True	AATGAA	-23	NA	42804488	42784525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_42785321_42786027_42786163_42804435
transcript_142685.known	chr3	+	3389	5	FSM	ENSG00000144649.10	ENST00000430121.3	3389	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	3.53553390593274	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTCTTAACTTTGTTT	42978616	True	NA	6	True	TATAAA	-21	NA	42979310	43057715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_42979646_43032266_43033554_43053520_43053644_43055431_43055536_43056175
transcript_142694.known	chr3	+	783	4	FSM	ENSG00000144649.10	ENST00000488863.5	783	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	6.97614984548545	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGGACGAGGACCCATAA	42978586	True	NA	NA	False	NA	NA	NA	42979280	43056366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_42979646_43053520_43053644_43055431_43055536_43056175
transcript_142697.nic	chr3	+	1993	2	ISM	ENSG00000144649.10	ENST00000692251.1	4535	3	-269	22778	-24	475	5prime_fragment	FALSE	canonical	3	11	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAATAACTACTCAGAATG	NA	False	NA	NA	False	AATAAA	-17	NA	42979242	43033856	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_42979646_43032266
transcript_14270.known	chr1	-	2723	3	FSM	ENSG00000143570.19	ENST00000368623.7	2723	3	0	0	0	0	multi-exon	FALSE	canonical	3	1921	junction_2	37	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTACAGTATCTGATTCG	-153963440	False	NA	-11	True	AATAAA	-16	NA	153963475	153959109	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153960755_153962219_153962351_153962528
transcript_142701.known	chr3	-	2531	3	FSM	ENSG00000144647.7	ENST00000441964.1	2531	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTCAAGTCTTCTTATTG	-43104832	False	NA	-3	True	ATTAAA	-15	NA	43105939	43079231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_43081537_43090487_43090610_43105835
transcript_142703.known	chr3	-	2547	2	FSM	ENSG00000144647.7	ENST00000344697.3	2547	2	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	0	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTCAAGTCTTCTTAT	-43104972	True	NA	-5	True	ATTAAA	-13	NA	43106079	43079233	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_43081537_43105835
transcript_142704.known	chr3	+	5188	7	FSM	ENSG00000163788.14	ENST00000296088.12	5188	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	4.11298755975102	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGTCCTGTGTTGTATTG	43285729	True	NA	NA	False	AATAAA	-29	NA	43286539	43351143	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_43286676_43299753_43299816_43303097_43303793_43332168_43332311_43340286_43340500_43343343_43343479_43347338
transcript_142705.known	chr3	+	5128	6	FSM	ENSG00000163788.14	ENST00000429705.6	5128	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	9.86711710683521	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGTCCTGTGTTGTATTG	43285727	True	NA	NA	False	AATAAA	-29	NA	43286537	43351143	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_43286676_43303097_43303793_43332168_43332311_43340286_43340500_43343343_43343479_43347338
transcript_14271.known	chr1	+	1749	10	FSM	ENSG00000143578.16	ENST00000368607.8	1749	10	0	0	0	0	multi-exon	TRUE	canonical	3	51	junction_1	43.2155093330344	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTATCCCAGAAGTTTGAA	153966374	True	NA	15	True	AATAAA	-15	NA	153967901	153974359	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_153968165_153968521_153968700_153968929_153969177_153969333_153969456_153972743_153972837_153972971_153973079_153973194_153973264_153973379_153973465_153973619_153973717_153973871
transcript_142710.known	chr3	-	3155	13	FSM	ENSG00000160746.13	ENST00000292246.8	3155	13	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_10	18.9566391184373	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCGGAGAAGGTGAGAAGG	-43619115	True	NA	NA	False	NA	NA	NA	43622011	43365847	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_43366975_43432610_43432728_43549719_43549849_43555277_43555470_43561219_43561403_43565652_43565728_43574808_43574865_43576691_43577262_43580352_43580473_43598531_43598667_43600383_43600582_43605713_43605864_43621908
transcript_142714.known	chr3	-	2419	12	FSM	ENSG00000160746.13	ENST00000396091.7	2419	12	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_10	55.3238400034494	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAAGGCAACCTCTCTGA	-43619088	True	NA	-45	True	CATAAA	-17	NA	43621984	43366358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_43366975_43432610_43432728_43549719_43549849_43555277_43555470_43561219_43561403_43565652_43565728_43574808_43574865_43576691_43577262_43580352_43580473_43598531_43598667_43605713_43605864_43621908
transcript_142716.known	chr3	-	2039	12	FSM	ENSG00000160746.13	ENST00000350459.8	2039	12	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_7	58.0514163664312	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTGACTCCTTCTGCC	-43619069	True	NA	-34	True	ATTAAA	-6	NA	43621965	43366347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_43366975_43432610_43432728_43549719_43549849_43555277_43555470_43561219_43561403_43565652_43565728_43574808_43574865_43580352_43580473_43598531_43598667_43600383_43600582_43605713_43605864_43621908
transcript_142719.known	chr3	-	2019	11	FSM	ENSG00000160746.13	ENST00000451430.6	2019	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	61.1899501552338	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGCTGCAGAGCCACTG	-43619107	True	NA	NA	False	NA	NA	NA	43622003	43366642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_43366975_43432610_43432728_43549719_43549849_43555277_43555470_43561219_43561403_43565652_43565728_43574808_43574865_43576691_43577262_43580352_43580473_43605713_43605864_43621908
transcript_14272.known	chr1	-	1273	5	FSM	ENSG00000143543.15	ENST00000271843.9	1273	5	0	0	0	0	multi-exon	FALSE	canonical	3	1051	junction_3	17.7200451466693	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGAGGTACCCTCTCA	-153965154	False	12520	-2	True	AATAAA	-21	NA	153977674	153974268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153974836_153975825_153975906_153976692_153976776_153976975_153977014_153977169
transcript_142722.known	chr3	+	5298	7	FSM	ENSG00000011198.10	ENST00000644371.2	5298	7	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_5	11.3639292891539	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTAGTTTTATTTTTAG	43689997	True	NA	20	True	AATAAA	-13	NA	43690937	43722725	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_43691040_43699275_43699362_43702214_43702588_43711708_43711864_43714946_43715059_43717670_43717858_43718442
transcript_142725.known	chr3	+	1241	6	FSM	ENSG00000011198.10	ENST00000458276.7	1241	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	38.4832431065782	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGTACTGAAAAACTGTA	43689939	True	NA	21	True	AATAAA	-17	NA	43690879	43718797	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_43691040_43699275_43699362_43702214_43702588_43711708_43711864_43714946_43715059_43718442
transcript_142726.known	chr3	-	1069	1	FSM	ENSG00000272121.1	ENST00000606217.1	1069	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTTTCTACACTGGATT	-43999003	True	NA	2	True	ATTAAA	-19	NA	43999149	43998080	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_43998100_43999100
transcript_142728.known	chr3	+	1844	11	FSM	ENSG00000179152.20	ENST00000417237.5	1844	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	15.9088025947901	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTGCTGCTTTAAAAGTA	44336248	True	NA	44	True	NA	NA	NA	44338118	44407790	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_44338320_44354738_44354812_44357740_44357877_44361364_44361519_44367455_44367709_44392854_44392978_44396399_44396498_44396742_44396835_44400354_44400588_44401202_44401335_44407441
transcript_14273.known	chr1	-	1216	4	FSM	ENSG00000143543.15	ENST00000368589.5	1216	4	0	0	0	0	multi-exon	FALSE	canonical	3	1087	junction_2	4.32049379893857	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTCCCTTCTGTAACTT	-153965140	False	12520	-16	True	AATAAA	-15	NA	153977660	153974511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153974836_153975825_153975906_153976692_153977014_153977169
transcript_142733.known	chr3	+	3306	11	FSM	ENSG00000179152.20	ENST00000412611.6	3306	11	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	14.9803204238094	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTTTTTCTTGTTACCC	44338354	True	NA	8	True	AATAAA	-20	NA	44338756	44409451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_44338835_44354738_44354812_44357740_44357877_44361364_44361519_44367531_44367709_44392854_44392978_44396399_44396498_44396742_44396835_44400354_44400588_44401202_44401335_44407441
transcript_142739.known	chr3	+	1998	4	FSM	ENSG00000179152.20	ENST00000383746.7	1998	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	24.9131825880731	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTGAGTTCTGTGAATC	44336248	True	NA	11	True	AATAAA	-23	NA	44338118	44359804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_44338320_44354738_44354812_44357740_44357877_44358216
transcript_14274.known	chr1	-	2214	5	FSM	ENSG00000143570.19	ENST00000617697.4	2214	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	976.856821647881	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGATTCGTTTGTTTTGGG	-153960473	False	NA	0	True	AATAAA	-27	NA	153968184	153959098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_153960755_153962219_153962351_153962528_153962748_153963596_153963704_153968083
transcript_142740.known	chr3	+	2178	4	FSM	ENSG00000179152.20	ENST00000396078.7	2178	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	24.0739601136904	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTCTGAGTTCTGTGAA	44338364	True	NA	9	True	AATAAA	-21	NA	44338451	44359802	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_44338835_44354738_44354812_44357740_44357877_44358216
transcript_142742.known	chr3	-	877	2	FSM	ENSG00000185219.18	ENST00000474600.1	877	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAGCAACTTCTGGGCAC	-44474349	True	NA	NA	False	CATAAA	-1	NA	44477649	44454878	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_44455697_44477590
transcript_142744.known	chr3	+	838	4	FSM	ENSG00000283036.3	ENST00000634998.2	838	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCAGTGTTTCATTATTT	NA	False	NA	NA	False	AATAAA	-16	NA	44427949	44429529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_44428159_44428554_44428625_44428846_44428942_44429065
transcript_142746.nnic	chr3	-	1782	5	NNC	ENSG00000178917.17	novel	1326	3	NA	NA	5	3079	at_least_one_novel_splicesite	TRUE	canonical	3	9	junction_4	13.6633634219397	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGATTTTATTTTTTTC	-44506618	True	NA	-6	True	AATAAA	-17	NA	44510631	44491767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_44492508_44499893_44500638_44502541_44502669_44502964_44503057_44510552
transcript_142748.nnic	chr3	-	1699	4	NNC	ENSG00000178917.17	novel	1326	3	NA	NA	-4	3079	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_3	7.58653778449403	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGATTTTATTTTTTTC	-44506627	True	NA	-6	True	AATAAA	-17	NA	44510640	44491767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_44492508_44499893_44500638_44502541_44502669_44510552
transcript_142749.known	chr3	-	1326	3	FSM	ENSG00000178917.17	ENST00000489411.1	1326	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	9	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTTCAATCAAAACTCATA	-44506623	True	NA	NA	False	TATAAA	-19	NA	44510636	44499522	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_44500638_44502541_44502669_44510552
transcript_14275.known	chr1	+	467	5	FSM	ENSG00000177954.14	ENST00000643794.1	467	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	14528.4959884876	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTTATTGTCTTGTTT	153902405	True	NA	16	True	AATAAA	-16	NA	153990762	153992150	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_153990803_153990913_153991035_153991114_153991224_153991565_153991677_153992064
transcript_142753.known	chr3	+	3455	6	FSM	ENSG00000196345.13	ENST00000426540.6	3455	6	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_5	8.5463442476886	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCACATTGAATTATCC	44553916	True	NA	11	True	AATAAA	-18	NA	44555192	44572158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_44555482_44556929_44557471_44565486_44565656_44567911_44568004_44568306_44568434_44569921
transcript_142755.known	chr3	+	3477	6	FSM	ENSG00000196345.13	ENST00000273320.7	3477	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	9.94786409235671	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCACATTGAATTATCC	44553931	True	NA	11	True	AATAAA	-18	NA	44555207	44572158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_44555519_44556929_44557471_44565486_44565656_44567911_44568004_44568306_44568434_44569921
transcript_14276.known	chr1	+	352	4	FSM	ENSG00000177954.14	ENST00000651669.1	352	4	0	0	0	0	multi-exon	FALSE	canonical	3	23887	junction_3	4279.67226159512	4720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTCTTGTTTAAGTG	153902404	True	NA	21	True	AATAAA	-21	NA	153990761	153992155	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_153990803_153991114_153991224_153991565_153991677_153992064
transcript_142760.known	chr3	+	2935	6	FSM	ENSG00000186448.15	ENST00000383745.6	2935	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	19.70786644972	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGGCTTTCTACAGATTA	44624141	True	NA	9	True	AATAAA	-19	NA	44625048	44648471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_44625144_44629064_44629545_44631061_44631222_44632104_44632197_44632472_44632600_44646490
transcript_142761.known	chr3	+	7530	6	FSM	ENSG00000186448.15	ENST00000344387.9	7530	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	14.2042247236518	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGGCTTTCTACAGATTA	44624128	True	NA	9	True	AATAAA	-19	NA	44625035	44648471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_44625144_44629073_44629545_44631061_44631222_44632104_44632197_44632472_44632600_44641899
transcript_142763.known	chr3	+	1989	6	FSM	ENSG00000186448.15	ENST00000383744.8	1989	6	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_5	17.9844377170931	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATAGCAGCTTTATTTGT	44624111	True	NA	NA	False	AATGAA	-35	NA	44625018	44647504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_44625144_44629073_44629545_44631061_44631222_44632104_44632197_44632472_44632600_44646490
transcript_142768.known	chr3	+	5834	3	FSM	ENSG00000144792.9	ENST00000322734.2	5834	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCACTTTTTTTTTCTTTT	44583297	True	NA	NA	False	AATAAA	-20	NA	44584963	44599694	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_44585008_44586104_44586214_44594013
transcript_142772.known	chr3	+	644	2	FSM	ENSG00000144792.9	ENST00000468987.1	644	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATGGTAGTAGTGATGTG	44583295	True	NA	NA	False	AAAAAG	-18	NA	44584961	44586702	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_44585008_44586104
transcript_142776.known	chr3	+	620	4	FSM	ENSG00000169981.11	ENST00000415571.6	620	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	11.5566238822398	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCTCATCATATCAGAAAG	44647215	True	NA	NA	False	NA	NA	NA	44648740	44658765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_44648835_44650943_44651260_44652556_44652702_44658700
transcript_14278.known	chr1	+	573	4	FSM	ENSG00000177954.14	ENST00000493224.5	573	4	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	13826.4394147188	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATCCTGTTTATTGTCT	153902405	True	NA	11	True	AATAAA	-11	NA	153990762	153992145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_153991035_153991114_153991224_153991565_153991677_153992064
transcript_142781.known	chr3	+	2503	3	FSM	ENSG00000169981.11	ENST00000296092.7	2503	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	2.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTCTGCTGTCATTCT	44647216	True	NA	25	True	AATAAA	-23	NA	44648741	44660791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_44648835_44650940_44651260_44658700
transcript_142782.known	chr3	+	581	3	FSM	ENSG00000169981.11	ENST00000453164.1	581	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	15.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGAATGACTGTCACTTA	44647219	True	NA	NA	False	AATAAA	-30	NA	44648744	44658895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_44648812_44650940_44651260_44658700
transcript_142783.known	chr3	+	564	3	FSM	ENSG00000169981.11	ENST00000399560.2	564	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	11	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTTCAGACAAGTGATAG	44647216	True	NA	NA	False	AATAAA	-13	NA	44648741	44658878	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_44648812_44650943_44651260_44658700
transcript_142784.known	chr3	+	2658	4	FSM	ENSG00000169981.11	ENST00000396056.7	2658	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	2.16024689946929	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTCTGCTGTCATTCT	44647206	True	NA	25	True	AATAAA	-23	NA	44648731	44660791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_44648835_44650940_44651260_44652556_44652702_44658700
transcript_142785.known	chr3	+	3270	4	FSM	ENSG00000196653.12	ENST00000296091.8	3270	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.93310961716756	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGGTTATTTGGAACTC	44712288	True	NA	11	True	ATTAAA	-22	NA	44712645	44723831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_44712745_44714590_44714689_44720202_44720317_44720872
transcript_142786.known	chr3	+	3154	3	FSM	ENSG00000196653.12	ENST00000436624.7	3154	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	9	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGGTTATTTGGAACTC	44712302	True	NA	11	True	ATTAAA	-22	NA	44712659	44723831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_44712741_44720202_44720317_44720872
transcript_142789.known	chr3	+	3099	3	FSM	ENSG00000186446.12	ENST00000396048.6	3099	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	9	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGTGTGTCATTGTCTT	44728291	True	NA	7	True	AATAAA	-19	NA	44729595	44737083	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_44729723_44731475_44731561_44734196
transcript_142792.known	chr3	+	3353	3	FSM	ENSG00000186446.12	ENST00000620116.5	3353	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	13	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGTGTGTCATTGTCTT	44728330	True	NA	7	True	AATAAA	-19	NA	44729634	44737083	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_44730016_44731475_44731561_44734196
transcript_142794.nnic	chr3	-	4562	4	NNC	ENSG00000163807.6	novel	5079	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	172.09364375892	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGTGTTGTCTGTAATT	-44755778	True	NA	NA	False	AATAAA	-16	NA	44761619	44748743	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_44749350_44749866_44753553_44754223_44754369_44761494
transcript_142795.nnic	chr3	-	4486	4	NNC	ENSG00000163807.6	novel	5079	3	NA	NA	-51	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	172.09364375892	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGAGAGTGTTGTCTGT	-44755829	True	NA	NA	False	AATAAA	-12	NA	44761670	44748747	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_44749288_44749927_44753553_44754223_44754369_44761494
transcript_142796.known	chr3	-	5079	3	FSM	ENSG00000163807.6	ENST00000296121.6	5079	3	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_1	4	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGTGTTGTCTGTAATT	-44755778	True	NA	NA	False	AATAAA	-16	NA	44761619	44748743	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_44753553_44754223_44754369_44761494
transcript_142805.known	chr3	+	4760	35	FSM	ENSG00000163808.17	ENST00000326047.9	4760	35	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_21	15.2142712097197	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGTGACTTACATTGTT	44759112	True	NA	9	True	AATAAA	-21	NA	44761793	44853256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_44761885_44774394_44774438_44775253_44775438_44778114_44778192_44780884_44780923_44784844_44784943_44786394_44786575_44794216_44794427_44797550_44797677_44797833_44797957_44800313_44800438_44801449_44801527_44801764_44801975_44802813_44802992_44805026_44805169_44805844_44805987_44810845_44811044_44812181_44812290_44813074_44813181_44814910_44815077_44826038_44826190_44826374_44826461_44827458_44827529_44828213_44828301_44829970_44830076_44830895_44831019_44838274_44838422_44840354_44840457_44841073_44841239_44843124_44843235_44847984_44848058_44848520_44848559_44851786_44851953_44852207_44852340_44852672
transcript_14281.known	chr1	+	496	3	FSM	ENSG00000177954.14	ENST00000477151.2	496	3	0	0	0	0	multi-exon	FALSE	canonical	3	23887	junction_2	4568	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATCCTGTTTATTGTCTT	153902563	False	NA	12	True	AATAAA	-12	NA	153990920	153992146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_153991224_153991565_153991677_153992064
transcript_142818.nic	chr3	+	3410	27	ISM	ENSG00000163808.17	ENST00000326047.9	4760	35	-20	14835	-20	10931	5prime_fragment	FALSE	canonical	3	146	junction_21	12.9980084956147	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGAAACACACAGGTGTC	44759092	True	NA	NA	False	NA	NA	NA	44761773	44838421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_44761885_44774394_44774438_44775253_44775438_44778114_44778192_44780884_44780923_44784844_44784943_44786394_44786575_44794216_44794427_44797550_44797677_44797833_44797957_44800313_44800438_44801449_44801527_44801764_44801975_44802813_44802992_44805026_44805169_44805844_44805987_44810845_44811044_44812181_44812290_44813074_44813181_44814910_44815077_44826038_44826190_44826374_44826461_44827458_44827529_44828213_44828301_44829970_44830076_44830895_44831019_44838274
transcript_14282.known	chr1	-	1111	10	FSM	ENSG00000143549.21	ENST00000368530.7	1111	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	2289.97453217818	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACCCTGCATTTGTGTC	-154192057	False	NA	NA	False	ATTAAA	-24	NA	154192076	154167741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154167941_154169304_154169384_154170399_154170470_154170648_154170712_154172028_154172105_154172907_154172979_154173083_154173202_154176114_154176249_154191185_154191312_154191901
transcript_142824.nic	chr3	+	2767	21	ISM	ENSG00000163808.17	ENST00000326047.9	4760	35	-20	27092	-20	-1326	5prime_fragment	FALSE	canonical	3	151	junction_5	11.1382224793726	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACTCTGAAATCTGATC	44759092	True	NA	22	True	AAAAAG	-5	NA	44761773	44826164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_44761885_44774394_44774438_44775253_44775438_44778114_44778192_44780884_44780923_44784844_44784943_44786394_44786575_44794216_44794427_44797550_44797677_44797833_44797957_44800313_44800438_44801449_44801527_44801764_44801975_44802813_44802992_44805026_44805169_44805844_44805987_44810845_44811044_44812181_44812290_44813074_44813181_44814910_44815077_44826038
transcript_142828.known	chr3	+	4795	34	FSM	ENSG00000163808.17	ENST00000438321.5	4795	34	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	33.2424380541945	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTTACATTGTTCATTC	44759039	True	NA	14	True	AATAAA	-26	NA	44761720	44853261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_44761885_44775253_44775438_44778114_44778192_44780884_44780923_44784844_44784943_44786394_44786575_44794216_44794427_44797550_44797677_44797833_44797957_44800313_44800438_44801449_44801527_44801764_44801975_44802813_44802992_44805026_44805169_44805844_44805987_44810845_44811044_44812181_44812290_44813074_44813181_44814910_44815077_44826038_44826190_44826374_44826461_44827458_44827529_44828213_44828301_44829970_44830076_44830895_44831019_44838274_44838422_44840354_44840457_44841073_44841239_44843124_44843235_44847984_44848058_44848520_44848559_44851786_44851953_44852207_44852340_44852672
transcript_142835.nnic	chr3	+	1069	4	NNC	ENSG00000169964.8	novel	977	3	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	32.2628096868343	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAGGTACGGTATCTTA	44860387	True	NA	12	True	AATAAA	-22	NA	44861888	44865664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_44862016_44862357_44862528_44864196_44864344_44865039
transcript_142839.known	chr3	+	977	3	FSM	ENSG00000169964.8	ENST00000302392.5	977	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	40.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAGGTACGGTATCTTA	44860410	True	NA	12	True	AATAAA	-22	NA	44861911	44865664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_44862117_44864196_44864344_44865039
transcript_14284.known	chr1	-	1219	9	FSM	ENSG00000143549.21	ENST00000271850.11	1219	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	2021.51088297837	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAACATTCCAAATAATT	-154192039	False	NA	NA	False	NA	NA	NA	154192058	154157317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154157722_154170399_154170470_154170648_154170712_154172028_154172105_154172907_154172979_154173083_154173202_154176114_154176249_154191185_154191312_154191901
transcript_142843.known	chr3	+	3071	2	FSM	ENSG00000169964.8	ENST00000477126.1	3071	2	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACGGTATCTTAATTCTT	44860402	True	NA	18	True	AATAAA	-28	NA	44861903	44865670	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_44864344_44865039
transcript_142846.known	chr3	+	1395	9	FSM	ENSG00000075914.13	ENST00000491476.5	1395	9	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_8	370.022106603106	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTGTGAATAAAGTTTAGA	44966419	True	NA	-20	True	AAAACA	-30	NA	44976263	45012633	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_44976335_44989139_44989242_44989549_44989645_44997086_44997253_45001537_45001609_45005290_45005415_45007419_45007576_45011234_45011394_45012182
transcript_142850.known	chr3	+	1042	8	FSM	ENSG00000075914.13	ENST00000265564.8	1042	8	0	0	0	0	multi-exon	FALSE	canonical	3	1124	junction_2	79.7682868804184	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGGTATGTCTAGAGT	44966399	True	NA	7	True	ATTAAA	-16	NA	44976243	45011471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_44976335_44989139_44989242_44989549_44989645_44997086_44997253_45001537_45001609_45005290_45005415_45007419_45007576_45011234
transcript_142858.known	chr3	-	3101	8	FSM	ENSG00000163812.15	ENST00000296127.7	3101	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	82.630725125064	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAAAGAATGCTGTT	-44970231	True	NA	NA	False	NA	NA	NA	44976182	44924845	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_44926848_44929305_44929437_44932906_44932991_44933117_44933200_44933887_44933985_44945167_44945293_44959130_44959461_44975932
transcript_142861.known	chr3	-	1336	8	FSM	ENSG00000163812.15	ENST00000342790.8	1336	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	88.9741994246945	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAATCGAAAAAGCAAAAC	-44970215	True	NA	-112	True	NA	NA	NA	44976166	44926612	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_44926848_44929305_44929437_44933117_44933200_44933887_44933985_44945167_44945293_44958587_44958686_44959126_44959461_44975932
transcript_142867.known	chr3	-	3902	7	FSM	ENSG00000163812.15	ENST00000339420.7	3902	7	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_1	70.3974825938794	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTCTCCTGTTTTAAT	-44970231	True	NA	1	True	AATAAA	-25	NA	44976182	44915256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_44918144_44929305_44929437_44933117_44933200_44933887_44933985_44945167_44945293_44959130_44959461_44975932
transcript_142869.known	chr3	-	12594	7	FSM	ENSG00000163812.15	ENST00000424952.7	12594	7	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_2	33.2536547698979	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTGGAGTCTCCTGTTT	-44970223	True	NA	-3	True	AATAAA	-21	NA	44976174	44915260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_44926848_44929305_44929437_44933117_44933200_44933887_44933985_44945167_44945293_44959130_44959461_44975932
transcript_14288.known	chr1	-	1248	7	FSM	ENSG00000143549.21	ENST00000509409.5	1248	7	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_6	1713.17545478824	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAAAGGTGATTCCAGGA	-154080907	True	NA	NA	False	NA	NA	NA	154183227	154157111	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154157722_154170399_154170470_154170648_154170712_154172028_154172105_154172907_154172979_154173083_154173202_154182987
transcript_142883.known	chr3	-	5963	9	FSM	ENSG00000163814.8	ENST00000296129.6	5963	9	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	13.2641433948823	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGGTTTTCAAGTCTCC	-45145603	True	NA	-2	True	AATAAA	-25	NA	45146378	45082276	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_45086068_45089053_45089142_45091172_45091539_45093276_45093658_45095346_45095569_45110472_45110842_45112082_45112446_45118411_45118622_45146205
transcript_142893.nic	chr3	-	2244	8	ISM	ENSG00000163814.8	ENST00000296129.6	5963	9	-75	6780	-31	-6780	5prime_fragment	FALSE	canonical	3	75	junction_1	13.6785248040981	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTAGGTGGAATCTCTTA	NA	False	NA	NA	False	NA	NA	NA	45146453	45089056	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_45089142_45091172_45091539_45093276_45093658_45095346_45095569_45110472_45110842_45112082_45112446_45118411_45118622_45146205
transcript_142894.nnic	chr3	-	2029	8	NNC	ENSG00000163814.8	novel	5963	9	NA	NA	0	-6780	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_7	33.3540071943143	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTAGGTGGAATCTCTTA	-45145647	True	NA	NA	False	NA	NA	NA	45146422	45089056	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_45089142_45091172_45091539_45093276_45093658_45095346_45095569_45110472_45110842_45112082_45112446_45118411_45118622_45146389
transcript_142896.known	chr3	-	1416	4	FSM	ENSG00000163814.8	ENST00000425231.2	1416	4	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	3.29983164553722	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATTGAAAGGTCATTTTT	-45145647	True	NA	3	True	AATAAA	-42	NA	45146422	45110215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_45110842_45112082_45112446_45118411_45118622_45146205
transcript_142905.known	chr3	+	4781	22	FSM	ENSG00000011376.12	ENST00000645846.2	4781	22	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_5	20.8118664912129	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGTACAAGGAAGGAGTG	45381707	True	NA	9	True	ATTAAA	-19	NA	45388575	45549407	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_45388681_45391582_45391649_45394432_45394688_45400244_45400374_45417481_45417574_45419668_45419730_45446890_45446981_45458742_45458887_45474242_45474351_45476467_45476628_45485691_45485797_45488696_45488813_45491516_45491801_45496274_45496374_45500441_45500580_45513134_45513236_45516093_45516277_45517902_45518073_45520218_45520297_45523996_45524109_45541828_45541957_45547350
transcript_14291.known	chr1	-	4041	5	FSM	ENSG00000143549.21	ENST00000469717.5	4041	5	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_4	1945.46901478795	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCTATTTGACTTTTATT	-154080827	True	NA	-6	True	AATAAA	-22	NA	154183147	154156358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154157722_154170399_154170470_154170648_154172979_154173083_154173202_154182987
transcript_142911.known	chr3	+	4139	22	FSM	ENSG00000011376.12	ENST00000642274.1	4139	22	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	44.6992976553811	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTAATCCTGGTTTTATG	45381967	False	NA	NA	False	NA	NA	NA	45388835	45548599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_45389107_45391582_45391649_45394432_45394688_45400244_45400374_45417481_45417574_45419668_45419730_45446890_45446981_45458742_45458887_45474242_45474351_45476467_45476628_45485691_45485797_45488696_45488813_45491516_45491801_45496274_45496374_45500441_45500580_45513134_45513236_45516093_45516277_45517902_45518073_45520218_45520297_45523996_45524109_45541828_45541957_45547350
transcript_142918.known	chr3	+	10049	21	FSM	ENSG00000011376.12	ENST00000650792.2	10049	21	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_1	46.5365447793452	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCATGGTATATTGAGTG	45381692	True	NA	13	True	AATAAA	-28	NA	45388560	45554726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_45388681_45394432_45394688_45400244_45400374_45417481_45417574_45419668_45419730_45446890_45446981_45458742_45458887_45474242_45474351_45476467_45476628_45485691_45485797_45488696_45488813_45491516_45491801_45496274_45496374_45500441_45500580_45513134_45513236_45516093_45516277_45517902_45518073_45520218_45520297_45523996_45524109_45541828_45541957_45547350
transcript_142926.known	chr3	+	11442	8	FSM	ENSG00000144791.10	ENST00000273317.5	11442	8	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	6.95759752107767	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCGTTTTTCTAACTC	45594729	False	NA	NA	False	AATAAA	-22	NA	45594750	45686341	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_45596288_45636149_45636252_45665649_45665718_45668293_45668357_45672689_45672821_45673453_45673506_45674342_45674412_45676921
transcript_142933.known	chr3	+	2773	6	FSM	ENSG00000144791.10	ENST00000440097.5	2773	6	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	3.63318042491699	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAAAAAACCCCACTTCA	45594313	False	NA	NA	False	NA	NA	NA	45594323	45673898	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_45596288_45636149_45636252_45665649_45665718_45668293_45668357_45672689_45672821_45673453
transcript_142939.known	chr3	+	2164	21	FSM	ENSG00000211456.13	ENST00000418611.5	2164	21	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_1	161.294908475128	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGATGACAGAATTGATC	45689092	False	NA	NA	False	NA	NA	NA	45689240	45743804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_45689498_45690347_45690388_45703437_45703536_45705134_45705210_45706779_45706908_45709497_45709648_45713136_45713197_45714045_45714080_45719499_45719602_45721999_45722086_45722868_45722956_45723474_45723544_45731300_45731381_45732052_45732152_45735234_45735374_45737582_45737653_45737771_45737845_45738577_45738672_45738780_45738874_45739586_45739645_45743532
transcript_142941.known	chr3	+	1830	20	FSM	ENSG00000211456.13	ENST00000672858.2	1830	20	0	0	0	0	multi-exon	FALSE	canonical	3	484	junction_4	29.9496345456549	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGCTTTCCACATCAGCCC	45679263	False	NA	NA	False	NA	NA	NA	45689465	45743735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_45689498_45703437_45703536_45705134_45705210_45706779_45706908_45709497_45709648_45713136_45713197_45714045_45714080_45719499_45719602_45721999_45722086_45722868_45722956_45723474_45723544_45731300_45731381_45732052_45732152_45735234_45735374_45737582_45737653_45737771_45737845_45738577_45738672_45738780_45738874_45739586_45739645_45743532
transcript_142944.known	chr3	+	2013	19	FSM	ENSG00000211456.13	ENST00000441228.5	2013	19	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	120.974043231606	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTTCATTGTATTCTAT	45679152	True	NA	NA	False	ATTAAA	-37	NA	45689354	45743935	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_45689498_45703437_45703536_45705134_45705210_45709497_45709648_45713136_45713197_45714045_45714080_45719499_45719602_45721999_45722086_45722868_45722956_45723474_45723544_45731300_45731381_45732052_45732152_45735234_45735374_45737582_45737653_45737771_45737845_45738577_45738672_45738780_45738874_45739586_45739645_45743532
transcript_142946.known	chr3	-	1384	2	FSM	ENSG00000230530.2	ENST00000655322.1	1384	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTGTGTTTTCTTTCTA	NA	False	NA	2	True	TTTAAA	-24	NA	45689200	45679512	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_45680072_45688375
transcript_14295.known	chr1	-	3148	8	FSM	ENSG00000143549.21	ENST00000368533.8	3148	8	0	0	0	0	multi-exon	FALSE	canonical	3	4321	junction_2	219.329125530839	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTGCTTGTTCCTTAC	-154080869	True	NA	-5	True	ATTAAA	-31	NA	154183189	154155307	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154157722_154170399_154170470_154170648_154170712_154172028_154172105_154172907_154172979_154173083_154173202_154176114_154176249_154182987
transcript_142950.known	chr3	-	5425	11	FSM	ENSG00000163817.16	ENST00000358525.9	5425	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGGTTTTGGGTTTTG	-45796517	False	NA	NA	False	AATAAA	-23	NA	45796536	45755448	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_45759128_45759856_45760023_45762912_45763073_45765536_45765742_45770208_45770372_45771216_45771459_45772504_45772616_45775760_45775989_45780008_45780101_45782082_45782224_45796298
transcript_142952.known	chr3	-	4026	10	FSM	ENSG00000163818.19	ENST00000296135.11	4026	10	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_7	8.73194786861711	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAACTTGGAAAATCCTTT	-45840748	True	NA	NA	False	ATTAAA	-25	NA	45842119	45823315	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_45826333_45827355_45827460_45828438_45828616_45830912_45830991_45831072_45831139_45833049_45833122_45834237_45834299_45835589_45835785_45837926_45838052_45841988
transcript_142956.known	chr3	-	986	9	FSM	ENSG00000163818.19	ENST00000411866.5	986	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	14.5322916293336	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTTTGTCATATCCCCT	-45840758	True	NA	NA	False	NA	NA	NA	45842129	45826240	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_45826333_45827355_45827460_45828438_45828616_45830912_45830991_45831072_45831139_45833049_45833122_45834237_45834299_45835589_45835785_45841988
transcript_142959.known	chr3	-	8514	18	FSM	ENSG00000163820.16	ENST00000296137.7	8514	18	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_11	8.28973601409544	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTTGTCTCTCATTTTT	-45994359	True	NA	-1	True	AATAAA	-20	NA	45995824	45917902	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_45921841_45923655_45923766_45931070_45931282_45936447_45936544_45955248_45955394_45958407_45958620_45959392_45959543_45962224_45962393_45964335_45964455_45965032_45965126_45966276_45968704_45969674_45969766_45973087_45973232_45975238_45975346_45979704_45979831_45981569_45981677_45984855_45985023_45995721
transcript_14296.known	chr1	-	2147	4	FSM	ENSG00000143549.21	ENST00000368545.7	2147	4	0	0	0	0	multi-exon	FALSE	canonical	3	4321	junction_2	227.970758358757	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTATTTGACTTTTATTTA	-154172639	False	NA	-4	True	AATAAA	-24	NA	154172677	154156356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154157722_154170399_154170470_154170648_154170712_154172028
transcript_142963.known	chr3	-	2721	17	FSM	ENSG00000012223.13	ENST00000231751.9	2721	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.53645298596288	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTTTATTCCAAAGCTA	NA	False	NA	NA	False	TATAAA	-2	NA	46464905	46435644	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_46436230_46437939_46438130_46439295_46439481_46441415_46441484_46443440_46443583_46445280_46445437_46446439_46446494_46447307_46447399_46448862_46449018_46449853_46450029_46450494_46450674_46454304_46454361_46455294_46455443_46455795_46455979_46456289_46456399_46459655_46459820_46464824
transcript_142964.known	chr3	-	2130	17	FSM	ENSG00000012223.13	ENST00000417439.5	2130	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.63391343821318	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAAGAAGATGGCCCAGCT	NA	False	NA	NA	False	AGTAAA	-2	NA	46464868	46436192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_46436230_46437939_46438130_46439295_46439481_46441415_46441484_46443440_46443583_46445280_46445437_46446439_46446494_46447307_46447399_46448868_46449018_46449853_46450029_46450494_46450674_46454304_46454361_46455294_46455443_46455795_46455979_46456289_46456399_46459655_46459820_46464824
transcript_142967.known	chr3	-	4890	9	FSM	ENSG00000163827.14	ENST00000395905.8	4890	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	5.04820512657717	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTGGTTCTAAAAGCTT	-46565990	True	NA	NA	False	AATAAA	-19	NA	46566302	46515384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_46519064_46521521_46521659_46527425_46527582_46529904_46530051_46532772_46532910_46539044_46539202_46545045_46545254_46551466_46551611_46566176
transcript_14297.known	chr1	-	1115	8	FSM	ENSG00000143549.21	ENST00000368531.6	1115	8	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	1627.94645903033	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGTAACTGCTTCATC	-154183111	False	NA	2	True	AATAAA	-17	NA	154183130	154158608	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154159049_154170399_154170470_154170648_154170712_154172028_154172105_154172907_154172979_154173083_154173202_154176114_154176249_154182987
transcript_14298.known	chr1	-	2108	8	FSM	ENSG00000143549.21	ENST00000330188.13	2108	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2121.41320821758	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCAGACCTATTTGACTT	-154080885	True	NA	-11	True	AATAAA	-17	NA	154183205	154156363	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154157722_154170399_154170470_154170648_154170712_154171412_154171489_154172907_154172979_154173083_154173202_154176114_154176249_154182987
transcript_142982.known	chr3	+	1192	6	FSM	ENSG00000241186.10	ENST00000542931.6	1192	6	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	1858.89988971972	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAATGATTGAATTATAT	46574025	True	NA	NA	False	NA	NA	NA	46574533	46581860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_46574584_46579094_46579148_46579231_46579367_46579738_46579854_46579950_46580061_46581131
transcript_142989.known	chr3	+	1956	6	FSM	ENSG00000241186.10	ENST00000296145.6	1956	6	0	0	0	0	multi-exon	FALSE	canonical	3	3615	junction_2	551.942243355226	4737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAAATGTGAACTGGTTAT	46537381	True	NA	28	True	AGTAAA	-18	NA	46577787	46582457	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_46578005_46579094_46579148_46579231_46579367_46579738_46579854_46579950_46580061_46581131
transcript_1430.known	chr1	+	6083	7	FSM	ENSG00000157933.10	ENST00000378536.5	6083	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	4.38431547932197	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCGGGACAGCTGTGCGTG	2228308	True	NA	7	True	AATAAA	-15	NA	2228318	2310213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_2229736_2302977_2303104_2303284_2303401_2303839_2304103_2304292_2304586_2306019_2306251_2306576
transcript_143005.known	chr3	+	643	4	FSM	ENSG00000241186.10	ENST00000493282.5	643	4	0	0	0	0	multi-exon	FALSE	canonical	3	3615	junction_2	584.681679776839	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTCATTCTCAGGAACTG	46537341	True	NA	NA	False	NA	NA	NA	46577747	46579936	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_46578005_46579094_46579148_46579231_46579367_46579738
transcript_143018.known	chr3	+	704	3	FSM	ENSG00000241186.10	ENST00000471721.1	704	3	0	0	0	0	multi-exon	FALSE	canonical	3	3615	junction_2	398.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAACACATTGGTGTTGT	46537358	True	NA	NA	False	NA	NA	NA	46577764	46579642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_46578005_46579094_46579148_46579231
transcript_143026.known	chr3	-	1963	9	FSM	ENSG00000163827.14	ENST00000296144.3	1963	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	9.27951372648373	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGATTGTGAAAAGAGCAT	NA	False	NA	NA	False	AAAAAG	-16	NA	46580099	46518348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_46519064_46521521_46521659_46527425_46527582_46529904_46530051_46532772_46532910_46539044_46539202_46545045_46545254_46551466_46551611_46579936
transcript_143028.known	chr3	-	4913	26	FSM	ENSG00000178038.17	ENST00000318962.9	4913	26	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_7	5.00623611109185	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGGGGGCTGCAGTGTTT	-46693173	True	NA	NA	False	AATAAA	-41	NA	46693679	46668994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_46671065_46671487_46671585_46671883_46672034_46672139_46672202_46673338_46673382_46674565_46674740_46675617_46675687_46676244_46676403_46676641_46676739_46676848_46677023_46678258_46678390_46679209_46679288_46680429_46680542_46681245_46681408_46681499_46681599_46682028_46682095_46683129_46683327_46683781_46683849_46683988_46684048_46685524_46685645_46686307_46686440_46686982_46687149_46687618_46687685_46688097_46688297_46689337_46689466_46693642
transcript_143029.known	chr3	-	3937	26	FSM	ENSG00000178038.17	ENST00000434140.5	3937	26	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	6.29081870665496	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGACCCTGCTGTAGTT	-46693198	True	NA	-6	True	AATAAA	-16	NA	46693704	46670281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_46671065_46671487_46671585_46671883_46672034_46672139_46672202_46673338_46673382_46674565_46674740_46675617_46675977_46676244_46676403_46676641_46676739_46676848_46677023_46678258_46678390_46679209_46679288_46680429_46680542_46681245_46681408_46681503_46681599_46682028_46682095_46683129_46683327_46683781_46683849_46683988_46684048_46685524_46685645_46686307_46686440_46686982_46687149_46687618_46687685_46688097_46688297_46689337_46689466_46693642
transcript_14303.nic	chr1	+	4042	28	NIC	ENSG00000143569.19	novel	3877	27	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	283	junction_27	285.62714671581	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCAGCCTCTGCCTATTC	154220799	False	NA	7	True	TATAAA	-14	NA	154220840	154270847	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_154220976_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154266500_154266569_154268756_154268955_154269361_154269413_154270199
transcript_143043.known	chr3	+	1634	4	FSM	ENSG00000181585.7	ENST00000644830.1	1634	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	1.88561808316413	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTTGTGAATAAAGCTGA	46694472	False	NA	NA	False	NA	NA	NA	46694527	46710853	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_46694619_46705789_46705908_46709125_46709276_46709578
transcript_143044.known	chr3	+	1765	4	FSM	ENSG00000181585.7	ENST00000643606.3	1765	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.49443825784929	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGGCCTAGAAAATGGCC	46701336	False	NA	NA	False	AATAAA	-19	NA	46701391	46710886	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_46701581_46705789_46705908_46709125_46709276_46709578
transcript_143051.known	chr3	-	328	2	FSM	ENSG00000226074.5	ENST00000522832.1	328	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCCTGGAGTTTACACAG	-46810934	False	NA	NA	False	NA	NA	NA	46811341	46809497	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_46809590_46811105
transcript_143055.known	chr3	+	2123	14	FSM	ENSG00000160801.14	ENST00000313049.9	2123	14	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	6.5398188636407	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAAGCGGTGTGTGGCTTC	46883081	True	NA	7	True	AAAAAG	-22	NA	46883356	46903794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_46883635_46893906_46894010_46895734_46895870_46897854_46897966_46898073_46898193_46898377_46898473_46898661_46898858_46899302_46899457_46901024_46901086_46901413_46901481_46901765_46901861_46902525_46902668_46902748_46902791_46903269
transcript_143083.known	chr3	-	402	6	FSM	ENSG00000160799.12	ENST00000605358.5	402	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	260.443928706353	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAGATGTGGCCAAGAAG	-46976484	False	7552	NA	False	NA	NA	NA	46976501	46922304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_46922313_46923328_46923364_46923606_46923669_46925455_46925536_46940997_46941066_46976352
transcript_143086.nic	chr3	-	5015	3	ISM	ENSG00000181555.22	ENST00000409792.4	8541	21	-673	104047	-673	0	5prime_fragment	FALSE	canonical	3	57	junction_2	6.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAGATTTTTCAAAA	-47164548	True	NA	NA	False	NA	NA	NA	47164786	47120482	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_47124549_47126647_47126664_47163853
transcript_143091.known	chr3	+	4622	10	FSM	ENSG00000114648.12	ENST00000232766.6	4622	10	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_6	12.3538368109109	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGTCCTTTCTTGGTT	47281614	True	NA	12	True	AATAAA	-17	NA	47282943	47346816	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_47283095_47319652_47319784_47322567_47322709_47329950_47330150_47333156_47333318_47334682_47334820_47336534_47336758_47340571_47340677_47342718_47342831_47343554
transcript_143097.known	chr3	+	2249	9	FSM	ENSG00000114648.12	ENST00000442272.1	2249	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	30.0351356747393	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGGAGAACAGAAGGGAAAA	47281617	True	NA	NA	False	NA	NA	NA	47282946	47344577	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_47283095_47322567_47322709_47329950_47330150_47333156_47333318_47334682_47334820_47336534_47336758_47340571_47340677_47342718_47342831_47343554
transcript_1431.known	chr1	-	1645	14	FSM	ENSG00000116151.14	ENST00000378531.8	1645	14	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_6	9.60399325231607	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGGGCACTGCTCCTTGG	-2391461	False	NA	-1	True	AATAAA	-18	NA	2391554	2321252	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_2321580_2324096_2324144_2336468_2336549_2336716_2336851_2357431_2357599_2358591_2358716_2372480_2372592_2374460_2374558_2384977_2385066_2385806_2385898_2387418_2387530_2388238_2388338_2389924_2389997_2391457
transcript_143105.known	chr3	-	740	3	FSM	ENSG00000088727.14	ENST00000425853.5	740	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	42.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTATGTTTGTCTGTCTC	-47282468	False	NA	-4	True	AATAAA	-22	NA	47282518	47275227	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_47275491_47277281_47277380_47282139
transcript_143106.known	chr3	-	633	3	FSM	ENSG00000088727.14	ENST00000432493.5	633	3	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_2	5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTATGTTTGTCTGTCTC	-47282457	True	NA	-4	True	AATAAA	-22	NA	47282766	47275227	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_47275491_47277281_47277380_47282494
transcript_143109.known	chr3	+	375	2	FSM	ENSG00000114648.12	ENST00000483201.1	375	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTGTGTGTGTGTGT	47281629	False	NA	11	True	AGTAAA	-16	NA	47282958	47287458	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_47283095_47287219
transcript_143111.known	chr3	+	5237	25	FSM	ENSG00000076201.16	ENST00000265562.5	5237	25	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_8	10.8370987046042	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGTGTCTGAGTCTGCCC	47377420	True	NA	22	True	AATAAA	-16	NA	47381020	47413435	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_47381181_47396142_47396218_47404651_47404780_47405004_47405082_47405748_47405799_47405914_47406047_47406324_47406406_47406480_47406613_47406702_47406751_47407129_47407187_47407308_47407368_47407504_47407585_47407696_47407812_47407889_47407956_47408344_47408491_47408775_47409088_47409162_47409318_47409416_47409569_47409654_47409835_47409927_47411687_47411782_47411968_47412093_47412199_47412282_47412422_47412513_47412628_47412705
transcript_143113.known	chr3	+	5119	24	FSM	ENSG00000076201.16	ENST00000602307.5	5119	24	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	14.4265298566601	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGTGTCTGAGTCTGCCC	47377410	True	NA	22	True	AATAAA	-16	NA	47381010	47413435	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_47381181_47396142_47396218_47405004_47405082_47405748_47405799_47405914_47406047_47406324_47406406_47406480_47406613_47406702_47406751_47407129_47407187_47407308_47407368_47407504_47407585_47407696_47407812_47407889_47407956_47408344_47408491_47408775_47409088_47409162_47409318_47409416_47409569_47409654_47409835_47409927_47411687_47411782_47411968_47412093_47412199_47412282_47412422_47412513_47412628_47412705
transcript_143123.known	chr3	-	4254	23	FSM	ENSG00000114650.21	ENST00000265565.10	4254	23	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_7	116.378026453976	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTCTCTTGGAATTGT	-47470263	True	NA	1	True	TTTAAA	-38	NA	47475941	47413680	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_47414100_47414179_47414387_47414571_47414653_47414826_47414994_47415097_47415181_47417121_47417208_47417303_47417827_47418133_47418250_47418320_47418523_47418654_47418844_47419327_47419705_47420553_47420773_47420930_47421030_47422441_47422537_47423932_47424046_47425484_47425612_47425996_47426170_47427156_47427263_47427446_47427668_47428512_47428671_47435007_47435138_47442871_47443092_47475798
transcript_143139.known	chr3	-	3748	20	FSM	ENSG00000114650.21	ENST00000441517.6	3748	20	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_17	120.634403383854	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCATCATCTGTCAGGCA	-47470277	True	NA	-31	True	ATTAAA	-16	NA	47475955	47413712	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_47414100_47414179_47414387_47414571_47414653_47414826_47414994_47415097_47415181_47417121_47417208_47417303_47417824_47418133_47418250_47418320_47418523_47418654_47418844_47419327_47419705_47420553_47420773_47420930_47421030_47422441_47422537_47423932_47424046_47425484_47425612_47425996_47426170_47435007_47435138_47442871_47443092_47475798
transcript_143150.known	chr3	-	3430	18	FSM	ENSG00000114650.21	ENST00000320017.10	3430	18	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_15	132.323186197795	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCATCATCTGTCAGGCA	-47470259	True	NA	-31	True	ATTAAA	-16	NA	47475937	47413712	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_47414100_47414179_47414387_47414571_47414653_47414826_47414994_47415097_47415181_47417121_47417208_47417303_47417824_47418133_47418250_47418320_47418523_47418654_47418844_47419327_47419705_47420553_47420773_47420930_47421030_47422441_47422537_47423932_47424046_47435007_47435138_47442871_47443092_47475798
transcript_143153.nic	chr3	-	3394	17	NIC	ENSG00000114650.21	novel	3748	20	NA	NA	-59	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_14	124.290926358282	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCATCATCTGTCAGGCA	NA	False	NA	-31	True	ATTAAA	-16	NA	47476014	47413712	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_47414100_47414179_47414387_47414571_47414653_47414826_47414994_47415097_47415181_47417121_47417208_47417303_47417824_47418133_47418250_47418320_47418523_47418654_47418844_47419327_47419705_47420553_47420773_47420930_47421030_47422441_47422537_47435007_47435138_47442871_47443092_47475798
transcript_14316.known	chr1	+	3877	27	FSM	ENSG00000143569.19	ENST00000428931.6	3877	27	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_26	250.262043140158	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCAGCCTCTGCCTATTC	154201206	True	NA	7	True	TATAAA	-14	NA	154220954	154270847	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154220976_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154266500_154266569_154268756_154268955_154270199
transcript_143176.nic	chr3	-	1555	7	NIC	ENSG00000163832.16	novel	1352	7	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	2	28	junction_6	92.6146436705461	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCTGTGGGTTGTCTTG	-47513346	False	NA	-1	True	AATAAA	-19	NA	47513370	47495639	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_47496198_47498285_47498433_47501649_47501852_47504329_47504449_47510183_47510255_47511147_47511227_47512991
transcript_143178.nic	chr3	-	1366	7	NIC	ENSG00000163832.16	novel	1352	7	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_6	101.770984732061	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCTGTGGGTTGTCTTG	-47513388	False	NA	-1	True	AATAAA	-19	NA	47513412	47495639	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_47496198_47498285_47498433_47501649_47501852_47504329_47504449_47510183_47510255_47511147_47511227_47513222
transcript_143179.known	chr3	-	880	7	FSM	ENSG00000163832.16	ENST00000439305.5	880	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	94.8093115445712	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACGTGGAAGATAGAGCAA	-47513389	False	NA	NA	False	NA	NA	NA	47513413	47496028	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_47496198_47498285_47498433_47501649_47501852_47504329_47504449_47510183_47510255_47511147_47511227_47513320
transcript_143180.known	chr3	-	1352	7	FSM	ENSG00000163832.16	ENST00000296149.9	1352	7	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_6	53.3468732812795	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCTGTGGGTTGTCTTG	-47513688	False	NA	-1	True	AATAAA	-19	NA	47513712	47495639	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_47496198_47498285_47498433_47501649_47501852_47504329_47504449_47510183_47510255_47511147_47511227_47513536
transcript_143187.known	chr3	-	1277	6	FSM	ENSG00000163832.16	ENST00000442215.6	1277	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	100.633195318443	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTCCTGTGGGTTGTCTT	-47512244	True	NA	-2	True	AATAAA	-18	NA	47513709	47495640	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_47496198_47498285_47498433_47501649_47501852_47504329_47504449_47511147_47511227_47513536
transcript_143199.nic	chr3	-	860	5	ISM	ENSG00000163832.16	ENST00000296149.9	1352	7	-2	5799	-2	88	5prime_fragment	FALSE	canonical	3	137	junction_4	59.4369413748722	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCAGTGGGGCTGGTTAT	-47513690	False	NA	-1	True	AATAAA	-17	NA	47513714	47501438	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_47501852_47504329_47504449_47510183_47510255_47511147_47511227_47513536
transcript_143203.known	chr3	-	2089	4	FSM	ENSG00000114646.10	ENST00000456150.5	2089	4	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_1	3.29983164553722	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATTTTCTTAGTCTTTG	-47578122	False	NA	-4	True	AATAAA	-16	NA	47578133	47562238	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_47562762_47569151_47569228_47572685_47572875_47576832
transcript_143207.known	chr3	-	6354	28	FSM	ENSG00000173473.11	ENST00000254480.10	6354	28	0	0	0	0	multi-exon	FALSE	canonical	3	1083	junction_25	68.470233236832	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTGTGAATTATTTTT	-47763802	True	NA	69	True	TATAAA	-1	NA	47781893	47585268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_47588307_47590660_47590838_47610065_47610328_47622206_47622342_47635189_47635345_47636021_47636137_47638724_47638781_47661293_47661456_47662333_47662593_47670657_47670718_47675474_47675589_47676628_47676783_47678197_47678312_47680436_47680509_47686048_47686171_47689386_47689425_47693240_47693301_47701277_47701403_47706408_47706531_47710682_47710809_47714414_47714491_47720665_47720736_47729024_47729095_47736033_47736127_47738028_47738111_47745907_47745994_47772816_47772937_47781602
transcript_14321.known	chr1	+	3997	27	FSM	ENSG00000143569.19	ENST00000271877.11	3997	27	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_26	330.539562483621	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAGTGGCTTCTTGGATGC	154201100	True	NA	25	True	AAAACA	-40	NA	154220848	154271509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154220976_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234793_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154266500_154266569_154268756_154268955_154270880
transcript_14323.nic	chr1	+	3956	27	NIC	ENSG00000143569.19	novel	3877	27	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	305	junction_26	275.574783930717	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCAGCCTCTGCCTATTC	154201192	True	NA	7	True	TATAAA	-14	NA	154220940	154270847	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_154221041_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154266500_154266569_154268756_154268955_154270199
transcript_143234.nic	chr3	-	2701	24	ISM	ENSG00000173473.11	ENST00000254480.10	6354	28	-63	50025	-63	35056	5prime_fragment	FALSE	canonical	3	1083	junction_21	65.0967870360716	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAAGTGATACTGGGAAG	-47763865	False	NA	NA	False	AAGAAA	-1	NA	47781956	47635293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_47635345_47636021_47636137_47638724_47638781_47661293_47661456_47662333_47662593_47670657_47670718_47675474_47675589_47676628_47676783_47678197_47678312_47680436_47680509_47686048_47686171_47689386_47689425_47693240_47693301_47701277_47701403_47706408_47706531_47710682_47710809_47714414_47714491_47720665_47720736_47729024_47729095_47736033_47736127_47738028_47738111_47745907_47745994_47772816_47772937_47781602
transcript_143247.nic	chr3	-	2603	23	ISM	ENSG00000173473.11	ENST00000254480.10	6354	28	-63	50800	-63	34281	5prime_fragment	FALSE	canonical	3	1083	junction_20	65.9824200228069	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGTGAAAAGGAACAGGATA	-47763865	False	NA	16	True	GATAAA	-27	NA	47781956	47636068	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_47636137_47638724_47638781_47661293_47661456_47662333_47662593_47670657_47670718_47675474_47675589_47676628_47676783_47678197_47678312_47680436_47680509_47686048_47686171_47689386_47689425_47693240_47693301_47701277_47701403_47706408_47706531_47710682_47710809_47714414_47714491_47720665_47720736_47729024_47729095_47736033_47736127_47738028_47738111_47745907_47745994_47772816_47772937_47781602
transcript_143262.nic	chr3	-	2540	22	ISM	ENSG00000173473.11	ENST00000254480.10	6354	28	-63	53451	-63	31630	5prime_fragment	FALSE	canonical	3	1083	junction_19	67.2029450817775	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTCACAGCAGTAAAACCA	-47763865	False	NA	4	True	NA	NA	NA	47781956	47638719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_47638781_47661293_47661456_47662333_47662593_47670657_47670718_47675474_47675589_47676628_47676783_47678197_47678312_47680436_47680509_47686048_47686171_47689386_47689425_47693240_47693301_47701277_47701403_47706408_47706531_47710682_47710809_47714414_47714491_47720665_47720736_47729024_47729095_47736033_47736127_47738028_47738111_47745907_47745994_47772816_47772937_47781602
transcript_143292.nic	chr3	-	1324	11	ISM	ENSG00000173473.11	ENST00000254480.10	6354	28	-63	116009	-63	-21055	5prime_fragment	FALSE	canonical	3	1083	junction_8	66.7119929248108	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTATTCTTCTGCATGA	-47763865	False	NA	0	True	AATATA	-26	NA	47781956	47701277	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_47701403_47706408_47706531_47710682_47710809_47714414_47714491_47720665_47720736_47729024_47729095_47736033_47736127_47738028_47738111_47745907_47745994_47772816_47772937_47781602
transcript_143303.nic	chr3	-	708	5	ISM	ENSG00000173473.11	ENST00000254480.10	6354	28	-63	150792	-63	-7024	5prime_fragment	FALSE	canonical	3	1083	junction_2	71.1723260825442	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAAGATATCATCAAACG	-47763865	False	NA	NA	False	NA	NA	NA	47781956	47736060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_47736127_47738028_47738111_47745907_47745994_47772816_47772937_47781602
transcript_143321.known	chr3	+	3887	23	FSM	ENSG00000132153.15	ENST00000395745.6	3887	23	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	226.582866639438	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACTGCTGTCCACTAGGG	47796704	True	NA	20	True	AATAAA	-20	NA	47803133	47850192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_47803213_47805325_47805421_47810656_47810712_47818021_47818118_47819235_47819265_47827346_47827478_47829023_47829135_47840876_47841179_47841616_47841738_47843105_47843256_47845699_47845853_47846164_47847002_47847272_47847349_47847431_47847537_47847780_47847957_47848179_47848387_47848468_47848551_47848623_47848818_47848919_47849080_47849191_47849350_47849450_47849555_47849629_47849770_47849866
transcript_143327.known	chr3	+	3855	22	FSM	ENSG00000132153.15	ENST00000445061.6	3855	22	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_4	164.989850577697	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGCTGTCCACTAGGGG	47796708	True	NA	21	True	AATAAA	-21	NA	47803137	47850193	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_47803213_47805325_47805421_47810656_47810712_47818021_47818118_47827346_47827478_47829023_47829135_47840876_47841179_47841616_47841738_47843105_47843256_47845699_47845853_47846164_47847002_47847272_47847349_47847431_47847537_47847780_47847957_47848179_47848387_47848468_47848551_47848623_47848818_47848919_47849080_47849191_47849350_47849450_47849555_47849629_47849770_47849866
transcript_143335.nnic	chr3	+	4174	21	NIC	ENSG00000132153.15	novel	3887	23	NA	NA	-187	0	combination_of_known_splicesites	FALSE	canonical	3	38	junction_3	162.300793282103	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACTGCTGTCCACTAGGG	47802700	False	NA	20	True	AATAAA	-20	NA	47802721	47850192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_47803213_47805325_47805421_47810656_47810712_47827346_47827478_47829023_47829135_47840876_47841179_47841616_47841738_47843105_47843256_47845699_47845853_47846164_47847002_47847272_47847349_47847431_47847537_47847780_47847957_47848179_47848387_47848468_47848551_47848623_47848818_47848919_47849080_47849191_47849350_47849450_47849555_47849629_47849770_47849866
transcript_143359.known	chr3	+	1464	4	FSM	ENSG00000132153.15	ENST00000472718.5	1464	4	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_3	118.852850197208	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCTTTTTCAGCTCCT	47802898	False	NA	47	True	NA	NA	NA	47802908	47816972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_47803213_47805325_47805421_47810656_47810712_47815962
transcript_14336.known	chr1	+	3411	25	FSM	ENSG00000143569.19	ENST00000343815.10	3411	25	0	0	0	0	multi-exon	TRUE	canonical	3	134	junction_1	248.903564407985	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCGTTCTTTCCGTGCA	154219878	True	NA	26	True	AATAAA	-23	NA	154220178	154263505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154220245_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154263102
transcript_143360.known	chr3	+	3748	19	FSM	ENSG00000132153.15	ENST00000457607.1	3748	19	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_1	86.0122730260694	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGACCACTGCTGTCCAC	47818996	True	NA	15	True	AATAAA	-15	NA	47825027	47850187	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_47825248_47827346_47827478_47829023_47829135_47840876_47841179_47841616_47841738_47843105_47843256_47845699_47845853_47846164_47847002_47847272_47847349_47847431_47847537_47847780_47847957_47848179_47848387_47848468_47848551_47848623_47848818_47848919_47849080_47849191_47849350_47849450_47849555_47849629_47849770_47849866
transcript_143361.known	chr3	-	5142	19	FSM	ENSG00000047849.22	ENST00000360240.10	5142	19	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_6	68.2615928742393	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGGCCGGCACCCACAC	-48088987	True	NA	NA	False	GATAAA	-44	NA	48089272	47851867	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_47853040_47853162_47853353_47855247_47855361_47857430_47857513_47867245_47867339_47869213_47869328_47870812_47871106_47871226_47871287_47871916_47872101_47875684_47875901_47877416_47877524_47914816_47914940_47915950_47917175_47918718_47918842_47921764_47921879_47928227_47928351_47977864_47977934_47998637_47998880_48088772
transcript_14338.known	chr1	+	3451	25	FSM	ENSG00000143569.19	ENST00000613315.4	3451	25	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	279.913525213095	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCGTTCTTTCCGTGCA	154201100	True	NA	26	True	AATAAA	-23	NA	154220848	154263505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154220976_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234739_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154263102
transcript_143393.nic	chr3	-	2850	9	NIC	ENSG00000047849.22	novel	8920	21	NA	NA	-9	4763	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	153.604962078053	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAGCAAAAGAGATATTC	-48088996	True	NA	NA	False	AAAAAG	-10	NA	48089281	47912098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_47912422_47914816_47914940_47915950_47917175_47918718_47918842_47921764_47921879_47928227_47928351_47977864_47977934_47998637_47998880_48088772
transcript_1434.known	chr1	-	1500	11	FSM	ENSG00000116151.14	ENST00000378529.7	1500	11	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	10.9676797910953	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCATGCCTTCTACTTGGA	-2391614	True	NA	NA	False	CATAAA	-14	NA	2391707	2355174	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_2355465_2357431_2357599_2358591_2358716_2372480_2372592_2374460_2374558_2384977_2385066_2385806_2385898_2387418_2387530_2388238_2388338_2389924_2389997_2391457
transcript_143402.known	chr3	-	899	6	FSM	ENSG00000047849.22	ENST00000423088.5	899	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	181.548230506386	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCACAGAAACAGATGTAT	-48074634	True	NA	NA	False	AAAAAG	-29	NA	48088801	47916861	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_47917175_47918718_47918842_47928227_47928351_47977864_47977934_47998637_47998880_48088772
transcript_143404.nnic	chr3	-	1597	6	NIC	ENSG00000047849.22	novel	5142	19	NA	NA	-9	173	combination_of_known_splicesites	FALSE	canonical	3	45	junction_4	154.142012443071	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGAGGGCATCTCCTATA	-48088996	True	NA	NA	False	AAGAAA	-13	NA	48089281	47916688	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_47917175_47918718_47918842_47921764_47921879_47928227_47928351_47998637_47998880_48088772
transcript_143406.nnic	chr3	-	1543	6	NIC	ENSG00000047849.22	novel	5142	19	NA	NA	-9	173	combination_of_known_splicesites	FALSE	canonical	3	41	junction_1	170.766038778207	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGAGGGCATCTCCTATA	-48088996	True	NA	NA	False	AAGAAA	-13	NA	48089281	47916688	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_47917175_47921764_47921879_47928227_47928351_47977864_47977934_47998637_47998880_48088772
transcript_143407.known	chr3	-	2743	4	FSM	ENSG00000047849.22	ENST00000439356.2	2743	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	222.042538467044	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTTATGGACTGGATTTG	-48074657	True	NA	NA	False	AATAAA	-27	NA	48088824	47973085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_47975466_47977864_47977934_47998637_47998880_48088772
transcript_143411.nic	chr3	-	3718	16	NIC	ENSG00000164045.12	novel	3844	15	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	98	junction_11	72.5912758761914	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTACATTTCCCTTTAAG	-48183194	True	NA	30	True	NA	NA	NA	48188448	48157145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_48159086_48159343_48159456_48164306_48164438_48165635_48165735_48165830_48165894_48167845_48167945_48174283_48174458_48177370_48177443_48177853_48177989_48180720_48180841_48182928_48183028_48183799_48183837_48184652_48184696_48186702_48186780_48187777_48188216_48188369
transcript_143412.nic	chr3	-	3882	16	NIC	ENSG00000164045.12	novel	3844	15	NA	NA	-192	0	combination_of_known_junctions	FALSE	canonical	3	111	junction_15	61.6353433961031	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTACATTTCCCTTTAAG	NA	False	NA	30	True	NA	NA	NA	48188609	48157145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_48159086_48159343_48159456_48164306_48164438_48165635_48165735_48165830_48165894_48167845_48167945_48174283_48174458_48177370_48177443_48177853_48177989_48180720_48180841_48182928_48183031_48183799_48183837_48184652_48184696_48186702_48186780_48187777_48188216_48188369
transcript_143416.nic	chr3	-	3866	15	NIC	ENSG00000164045.12	novel	3844	15	NA	NA	-25	0	intron_retention	FALSE	canonical	3	98	junction_11	60.2698438825973	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTACATTTCCCTTTAAG	-48183188	True	NA	30	True	NA	NA	NA	48188442	48157145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_48159086_48159343_48159456_48164306_48164438_48165635_48165735_48165830_48165894_48167845_48167945_48174283_48174458_48177370_48177443_48177853_48177989_48180720_48180841_48182928_48183028_48183799_48183837_48184652_48184696_48186702_48186780_48187777
transcript_143417.known	chr3	-	3844	15	FSM	ENSG00000164045.12	ENST00000302506.8	3844	15	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_11	43.8434715778758	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTACATTTCCCTTTAAG	-48183163	True	NA	30	True	NA	NA	NA	48188417	48157145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48159086_48159343_48159456_48164306_48164438_48165635_48165735_48165830_48165894_48167845_48167945_48174283_48174458_48177370_48177443_48177853_48177989_48180720_48180841_48182928_48183031_48183799_48183837_48184652_48184696_48186702_48186780_48187777
transcript_143418.nic	chr3	-	3573	15	NIC	ENSG00000164045.12	novel	3844	15	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_9	92.3825233052491	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTACATTTCCCTTTAAG	-48183169	True	NA	30	True	NA	NA	NA	48188423	48157145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_48159086_48159343_48159456_48164306_48164438_48165635_48165735_48165830_48165894_48167845_48167945_48174283_48174458_48177370_48177443_48177853_48177989_48182928_48183028_48183799_48183837_48184652_48184696_48186702_48186780_48187777_48188216_48188369
transcript_143419.nic	chr3	-	3762	15	NIC	ENSG00000164045.12	novel	3844	15	NA	NA	-192	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_9	84.2096509084466	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTACATTTCCCTTTAAG	NA	False	NA	30	True	NA	NA	NA	48188609	48157145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_48159086_48159343_48159456_48164306_48164438_48165635_48165735_48165830_48165894_48167845_48167945_48174283_48174458_48177370_48177443_48177853_48177989_48182928_48183031_48183799_48183837_48184652_48184696_48186702_48186780_48187777_48188216_48188369
transcript_14342.nic	chr1	+	3480	25	NIC	ENSG00000143569.19	novel	3451	25	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	670	junction_24	168.648282100813	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCGTTCTTTCCGTGCA	154220799	False	NA	26	True	AATAAA	-23	NA	154220840	154263505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_154220976_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154263102
transcript_143425.nic	chr3	-	3746	14	NIC	ENSG00000164045.12	novel	3844	15	NA	NA	-25	0	intron_retention	FALSE	canonical	3	65	junction_9	85.5363170732849	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTACATTTCCCTTTAAG	-48183188	True	NA	30	True	NA	NA	NA	48188442	48157145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_48159086_48159343_48159456_48164306_48164438_48165635_48165735_48165830_48165894_48167845_48167945_48174283_48174458_48177370_48177443_48177853_48177989_48182928_48183028_48183799_48183837_48184652_48184696_48186702_48186780_48187777
transcript_143426.known	chr3	-	3663	14	FSM	ENSG00000164045.12	ENST00000351231.7	3663	14	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_9	74.9470029716857	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTACATTTCCCTTTAAG	-48183102	True	NA	30	True	NA	NA	NA	48188356	48157145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48159086_48159343_48159456_48164306_48164438_48165635_48165735_48165830_48165894_48167845_48167945_48174283_48174458_48177370_48177443_48177853_48177989_48182928_48183031_48183799_48183837_48184652_48184696_48186702_48186780_48187777
transcript_143431.known	chr3	-	913	7	FSM	ENSG00000172113.10	ENST00000415053.5	913	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	62.4804413841288	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGGTGGTTCAGAAGAA	-48299629	True	NA	NA	False	NA	NA	NA	48301325	48294446	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48294804_48295074_48295236_48296118_48296159_48296726_48296830_48298426_48298524_48300526_48300635_48301278
transcript_143434.known	chr3	-	1353	7	FSM	ENSG00000172113.10	ENST00000452211.5	1353	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	61.6191258187478	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTCTAATTGACTTGCC	-48301295	False	NA	-105	True	AAAAAG	-3	NA	48301305	48294082	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48294804_48295074_48295236_48296118_48296159_48296726_48296830_48298426_48298524_48300430_48300635_48301278
transcript_143443.known	chr3	-	613	6	FSM	ENSG00000172113.10	ENST00000425930.5	613	6	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_5	51.9669125501987	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTATGTAGCTGGAACAGG	-48299657	True	NA	NA	False	NA	NA	NA	48301353	48294675	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48294804_48295074_48295236_48296118_48296159_48296726_48296830_48298426_48298524_48301269
transcript_143444.known	chr3	-	1320	6	FSM	ENSG00000172113.10	ENST00000643457.1	1320	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	47.1889817648145	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTATGCTGCCACATTT	-48299692	True	NA	-17	True	AATAAA	-19	NA	48301388	48293994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48294804_48295074_48295236_48296118_48296159_48296726_48296830_48298426_48298524_48301278
transcript_143449.known	chr3	-	2004	6	FSM	ENSG00000172113.10	ENST00000421967.5	2004	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	44.5448089007013	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATCTATCTGAAAGCATCA	-48299662	True	NA	NA	False	TATAAA	-3	NA	48301358	48293263	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48294804_48295074_48295236_48296118_48296159_48296726_48296830_48298426_48298524_48301295
transcript_143450.known	chr3	-	2903	6	FSM	ENSG00000172113.10	ENST00000442597.6	2903	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	47.1889817648145	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATCAGTGTGAACTCGTG	-48299671	True	NA	NA	False	AATAAA	-21	NA	48301367	48292316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48294804_48295074_48295236_48296118_48296159_48296726_48296830_48298426_48298524_48301352
transcript_143451.known	chr3	-	794	6	FSM	ENSG00000172113.10	ENST00000418431.5	794	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	60.8013157752363	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCTGCCTGAGGGCCTA	-48299691	True	NA	NA	False	NA	NA	NA	48301387	48294523	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48294804_48295074_48295236_48296118_48296237_48296726_48296830_48298426_48298524_48301352
transcript_143465.known	chr3	-	4776	5	FSM	ENSG00000172113.10	ENST00000451657.6	4776	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	62.9459093190336	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTATTCTGTTCAATTC	NA	False	NA	NA	False	ATTAAA	-11	NA	48301685	48290721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48294804_48295074_48295236_48296726_48296830_48298426_48298524_48301352
transcript_143466.known	chr3	-	599	5	FSM	ENSG00000172113.10	ENST00000435684.5	599	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	62.9459093190336	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTAGGACCAGCCTGATG	-48299671	True	NA	NA	False	NA	NA	NA	48301367	48294654	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48294804_48295074_48295236_48296726_48296830_48298426_48298524_48301278
transcript_143471.known	chr3	+	3367	4	FSM	ENSG00000164048.14	ENST00000354698.8	3367	4	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_3	224.572680637893	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGTGTCTGGAGTTTG	48224155	True	NA	25	True	AATGAA	-38	NA	48241103	48270990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_48241215_48247624_48247678_48260812_48260940_48267914
transcript_143472.nic	chr3	+	3416	4	ISM	ENSG00000164048.14	ENST00000440261.6	917	5	-54	15640	-48	0	5prime_fragment	FALSE	canonical	3	104	junction_3	256.546292118986	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGTGTCTGGAGTTTG	48224103	True	NA	25	True	AATGAA	-38	NA	48241051	48270990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_48241215_48247624_48247678_48260812_48260940_48267917
transcript_143475.nnic	chr3	+	2867	4	NNC	ENSG00000164048.14	novel	3367	4	NA	NA	0	7775	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_3	291.832143534601	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTGCCTGAGTGCTGGT	48224155	True	NA	NA	False	AGTAAA	-15	NA	48241103	48278765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_48241215_48247624_48247678_48260812_48260940_48276189
transcript_143476.known	chr3	+	1677	4	FSM	ENSG00000164048.14	ENST00000427617.6	1677	4	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_3	254.664921459989	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCATGTTTGTAAGATC	48224151	True	NA	NA	False	AATAAA	-26	NA	48241099	48287627	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_48241215_48247624_48247678_48260812_48260940_48286245
transcript_143479.known	chr3	+	593	4	FSM	ENSG00000164048.14	ENST00000412564.5	593	4	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_3	214.233517452335	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCATCTTTGTATTCCTA	48224152	True	NA	17	True	AATAAA	-19	NA	48241100	48299253	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_48241215_48247624_48247678_48260812_48260940_48298954
transcript_14348.nic	chr1	+	3445	25	NIC	ENSG00000143569.19	novel	3451	25	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	380	junction_1	210.457203191053	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCGTTCTTTCCGTGCA	154201192	True	NA	26	True	AATAAA	-23	NA	154220940	154263505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_154221041_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154263102
transcript_143496.known	chr3	-	1461	4	FSM	ENSG00000164051.14	ENST00000447018.5	1461	4	0	0	0	0	multi-exon	TRUE	canonical	3	120	junction_3	75.6615269913757	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTTTTTTTCATTAAGAA	-48435129	True	NA	4	True	ATTAAA	-35	NA	48440081	48432163	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48433167_48433706_48433872_48434816_48435016_48439987
transcript_143497.known	chr3	-	1385	4	FSM	ENSG00000164051.14	ENST00000412398.6	1385	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	125.158566093842	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACTGAGTTTTTTTCAT	-48435167	True	NA	-2	True	ATTAAA	-29	NA	48440119	48432169	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48433167_48433706_48433872_48434816_48435016_48440095
transcript_143499.known	chr3	-	1611	4	FSM	ENSG00000164051.14	ENST00000395694.7	1611	4	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_3	64.3480121423084	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCAGACTGAGTTTTTTT	-48435167	True	NA	-5	True	ATTAAA	-26	NA	48440119	48432172	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48433167_48433706_48433872_48434816_48435137_48439987
transcript_143501.known	chr3	-	1554	4	FSM	ENSG00000164051.14	ENST00000442740.1	1554	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	111.667164177996	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGAGTTTTATTATTTAA	-48435148	True	NA	-27	True	ATTAAA	-4	NA	48440100	48432194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48433167_48433706_48433977_48434816_48435016_48439987
transcript_143508.known	chr3	+	561	4	FSM	ENSG00000232112.3	ENST00000438607.2	561	4	0	0	0	0	multi-exon	FALSE	canonical	3	12791	junction_1	2775.25089956846	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCGTTCTTGTGTGGTTGT	48325339	True	NA	14	True	ATTAAA	-19	NA	48440256	48444208	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_48440313_48440402_48440459_48440540_48440629_48443847
transcript_143509.known	chr3	+	619	3	FSM	ENSG00000232112.3	ENST00000477624.1	619	3	0	0	0	0	multi-exon	FALSE	canonical	3	17596	junction_1	881	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATGGCGTTCTTGTGTG	48325366	True	NA	9	True	ATTAAA	-14	NA	48440283	48444203	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_48440459_48440540_48440629_48443847
transcript_143510.known	chr3	+	2376	14	FSM	ENSG00000164053.22	ENST00000639561.1	2376	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	43.0462803099258	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCTTGTTTCCTGAGTC	48444298	True	NA	22	True	ATTAAA	-34	NA	48446736	48465655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_48446800_48450036_48450171_48450492_48450576_48451728_48451900_48454299_48454419_48457258_48457417_48459358_48459455_48459786_48459917_48460109_48460800_48463744_48463882_48464040_48464133_48464581_48464663_48464830_48465084_48465486
transcript_143511.nic	chr3	+	2304	13	NIC	ENSG00000164053.22	novel	2376	14	NA	NA	-7	0	intron_retention	FALSE	canonical	0	0	junction_1	30.8422284466534	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCTTGTTTCCTGAGTC	48444287	True	NA	22	True	ATTAAA	-34	NA	48446725	48465655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_48446800_48450036_48450171_48451728_48451900_48454299_48454419_48457258_48457417_48459358_48459455_48459786_48459917_48460109_48460800_48463744_48463882_48464040_48464133_48464581_48464663_48464830_48465084_48465486
transcript_143513.known	chr3	+	4576	13	FSM	ENSG00000164053.22	ENST00000320211.10	4576	13	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_6	14.544949486181	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGAGTGGTCAATTGGC	48444298	True	NA	4	True	AATAAA	-19	NA	48446736	48467645	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_48447093_48450036_48450171_48451728_48451900_48454299_48454419_48457258_48457417_48459358_48459455_48459786_48459917_48460109_48460800_48463744_48463882_48464040_48464133_48464581_48464663_48464830_48465084_48465486
transcript_143515.known	chr3	+	1105	4	FSM	ENSG00000213689.14	ENST00000433541.1	1105	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4.49691252107735	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGAGTGGTCAATTGGC	48465745	True	NA	4	True	AATAAA	-19	NA	48465810	48467645	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_48465939_48466250_48466310_48466629_48466642_48466739
transcript_143516.known	chr3	+	1096	2	FSM	ENSG00000213689.14	ENST00000625293.3	1096	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGAGTGGTCAATTGGC	48466176	True	NA	4	True	AATAAA	-19	NA	48466229	48467645	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_48466310_48466629
transcript_143530.known	chr3	-	2034	6	FSM	ENSG00000164054.17	ENST00000296444.7	2034	6	0	0	0	0	multi-exon	FALSE	canonical	3	491	junction_4	420.79477183064	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCCCCCTTTCTTCC	-48499896	True	NA	-42	True	AATAAA	-15	NA	48504174	48467875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48469187_48469360_48469574_48469727_48469844_48479176_48479258_48501136_48501294_48504018
transcript_143531.known	chr3	-	2250	6	FSM	ENSG00000164054.17	ENST00000442747.5	2250	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	549.052492936695	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCTGCCCCCTTTCTTC	-48504701	True	NA	-43	True	AATAAA	-14	NA	48504795	48467876	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48469187_48469360_48469574_48469727_48469844_48479176_48479258_48501136_48501294_48504422
transcript_143532.known	chr3	-	2081	6	FSM	ENSG00000164054.17	ENST00000444115.5	2081	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	550.468382379951	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCCTTTCTTCCTGGCCT	-48504732	True	NA	-36	True	AATAAA	-21	NA	48504826	48467869	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48469187_48469360_48469574_48469727_48469844_48479176_48479258_48501136_48501294_48504629
transcript_143533.known	chr3	-	1933	6	FSM	ENSG00000164054.17	ENST00000443308.6	1933	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	541.912686694084	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTACACTTGTTTATAATAA	-48499851	True	NA	-77	True	NA	NA	NA	48504129	48467910	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48469187_48469360_48469574_48469727_48469844_48479176_48479258_48501157_48501294_48504018
transcript_143539.known	chr3	-	1839	4	FSM	ENSG00000164054.17	ENST00000426002.5	1839	4	0	0	0	0	multi-exon	FALSE	canonical	3	992	junction_3	202.407180373293	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCCCCCTTTCTTCC	-48461864	True	NA	-42	True	AATAAA	-15	NA	48473208	48467875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48469187_48469360_48469574_48469727_48469844_48473009
transcript_143540.known	chr3	-	1908	3	FSM	ENSG00000164054.17	ENST00000494854.5	1908	3	0	0	0	0	multi-exon	FALSE	canonical	3	992	junction_2	239	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCCCCCTTTCTTCC	-48461759	True	NA	-42	True	AATAAA	-15	NA	48473103	48467875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48469574_48469727_48469844_48473009
transcript_143541.known	chr3	-	2306	7	FSM	ENSG00000164054.17	ENST00000417962.5	2306	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	580.603900166791	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCTGCCCCCTTTCTTC	-48503956	False	NA	-43	True	AATAAA	-14	NA	48504050	48467876	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48469187_48469360_48469574_48469727_48469844_48479176_48479258_48501136_48501294_48503094_48503194_48503720
transcript_143545.nic	chr3	-	3606	15	NIC	ENSG00000114268.12	novel	3499	14	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_8	24.9869353618148	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGTTGTATTTGGTAG	-48554965	True	NA	-18	True	AATAAA	-18	NA	48556834	48517683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_48519807_48521985_48522051_48523536_48523600_48523700_48523831_48525564_48525670_48535511_48535659_48536255_48536464_48536744_48536821_48538497_48538620_48539253_48539311_48539696_48539772_48543579_48543647_48549863_48549961_48550117_48550235_48556680
transcript_143547.known	chr3	-	1757	15	FSM	ENSG00000114268.12	ENST00000490115.5	1757	15	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_11	32.775986729959	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGATAGTCACCATGCCA	-48556889	False	NA	NA	False	NA	NA	NA	48556923	48519673	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48519807_48521985_48522051_48523536_48523600_48523700_48523831_48525564_48525670_48535511_48535659_48536255_48536464_48538497_48538620_48539253_48539311_48539696_48539772_48543579_48543647_48548531_48548660_48549863_48549961_48550117_48550235_48556680
transcript_143553.known	chr3	-	3499	14	FSM	ENSG00000114268.12	ENST00000232375.8	3499	14	0	0	0	0	multi-exon	TRUE	canonical	3	81	junction_11	13.6853915116961	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGTTGTATTTGGTAG	-48554934	True	NA	-18	True	AATAAA	-18	NA	48556803	48517683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48519807_48521985_48522051_48523536_48523600_48523700_48523831_48525564_48525670_48535511_48535659_48536255_48536464_48538497_48538620_48539253_48539311_48539696_48539772_48543579_48543647_48549863_48549961_48550117_48550235_48556680
transcript_14356.nic	chr1	+	3758	25	NIC	ENSG00000143569.19	novel	3864	26	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	3	240	junction_1	231.841536968441	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCGTTCTTTCCGTGCA	154201235	True	NA	26	True	AATAAA	-23	NA	154220983	154263505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_154221397_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154263102
transcript_143574.known	chr3	-	1595	13	FSM	ENSG00000010256.11	ENST00000203407.6	1595	13	0	0	0	0	multi-exon	FALSE	canonical	3	2938	junction_12	226.916452442058	1760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTCATCCCTCTTTTGG	-48589158	True	NA	-14	True	AATAAA	-16	NA	48609646	48599001	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48599193_48599634_48599711_48600062_48600152_48600481_48600568_48600679_48600841_48600974_48601119_48601351_48601468_48603563_48603644_48604232_48604432_48604650_48604781_48605769_48605857_48609161_48609303_48609551
transcript_143603.known	chr3	-	778	6	FSM	ENSG00000010256.11	ENST00000412343.5	778	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	1300.02667664937	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTGATGGAATCACTGAA	-48589148	True	NA	NA	False	NA	NA	NA	48609636	48603562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48603644_48604232_48604432_48604650_48604781_48605769_48605857_48609161_48609303_48609496
transcript_143609.known	chr3	-	1387	12	FSM	ENSG00000010256.11	ENST00000415995.5	1387	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	1009.10432423515	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTCTAACCTGTGCCAC	-48589138	True	NA	-66	True	NA	NA	NA	48609626	48599053	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48599193_48599634_48599711_48600062_48600152_48600481_48600568_48600679_48600841_48600974_48601119_48601351_48601468_48603563_48603644_48604232_48604432_48604650_48604781_48605769_48605857_48609546
transcript_143633.known	chr3	-	2630	21	FSM	ENSG00000225697.13	ENST00000420764.6	2630	21	0	0	0	0	multi-exon	FALSE	canonical	1	69	junction_5	53.7580459094264	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCAGTCTCTGCTGTGGCT	-48632465	True	NA	-5	True	AATAAA	-16	NA	48635483	48625722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48626001_48626217_48626355_48626630_48626686_48626875_48627053_48627945_48628039_48628433_48628542_48628621_48628715_48629641_48629712_48629871_48629979_48630061_48630158_48630437_48630516_48630606_48630721_48630992_48631141_48631223_48631307_48631648_48631802_48631879_48632045_48632244_48632397_48632973_48633085_48633250_48633391_48633476_48633636_48635370
transcript_143638.nic	chr3	-	2530	21	NIC	ENSG00000225697.13	novel	2630	21	NA	NA	-4	0	combination_of_known_junctions	TRUE	canonical	1	22	junction_14	67.8154849573458	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCAGTCTCTGCTGTGGCT	-48632479	True	NA	-5	True	AATAAA	-16	NA	48635497	48625722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_48626001_48626217_48626355_48626630_48626686_48626875_48627053_48627945_48628039_48628433_48628542_48628621_48628715_48629641_48629712_48629871_48629979_48630061_48630158_48630437_48630516_48630606_48630721_48630992_48631141_48631223_48631307_48631762_48631802_48631879_48632045_48632244_48632397_48632973_48633085_48633250_48633391_48633476_48633636_48635370
transcript_143654.known	chr3	-	2611	21	FSM	ENSG00000225697.13	ENST00000395550.7	2611	21	0	0	0	0	multi-exon	FALSE	canonical	1	69	junction_5	55.8269424203046	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCAGTCTCTGCTGTGGCT	-48632443	True	NA	-5	True	AATAAA	-16	NA	48635461	48625722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48626001_48626217_48626355_48626630_48626686_48626875_48627056_48627945_48628039_48628433_48628542_48628621_48628715_48629641_48629712_48629871_48629979_48630061_48630158_48630437_48630516_48630606_48630721_48630992_48631141_48631223_48631307_48631648_48631802_48631879_48632045_48632244_48632397_48632973_48633085_48633250_48633391_48633476_48633636_48635370
transcript_143658.nic	chr3	-	2546	21	NIC	ENSG00000225697.13	novel	2611	21	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	1	22	junction_14	69.3086574678806	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCAGTCTCTGCTGTGGCT	-48632492	True	NA	-5	True	AATAAA	-16	NA	48635510	48625722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_48626001_48626217_48626355_48626630_48626686_48626875_48627056_48627945_48628039_48628433_48628542_48628621_48628715_48629641_48629712_48629871_48629979_48630061_48630158_48630437_48630516_48630606_48630721_48630992_48631141_48631223_48631307_48631762_48631802_48631879_48632045_48632244_48632397_48632973_48633085_48633250_48633391_48633476_48633636_48635370
transcript_143662.nic	chr3	-	2604	21	NIC	ENSG00000225697.13	novel	2630	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	62	junction_13	64.3680627330045	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCAGTCTCTGCTGTGGCT	-48632465	True	NA	-5	True	AATAAA	-16	NA	48635483	48625722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_48626001_48626217_48626355_48626630_48626686_48626875_48627056_48627945_48628039_48628433_48628542_48628621_48628715_48629641_48629712_48629871_48629979_48630061_48630158_48630437_48630516_48630606_48630721_48630992_48631141_48631252_48631307_48631648_48631802_48631879_48632045_48632244_48632397_48632973_48633085_48633250_48633391_48633476_48633636_48635370
transcript_143724.known	chr3	-	2317	19	FSM	ENSG00000225697.13	ENST00000337000.12	2317	19	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_15	73.5054587710042	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCAGTCTCTGCTGTGG	-48632475	True	NA	-7	True	AATAAA	-14	NA	48635493	48625724	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48626001_48626217_48626355_48626630_48626686_48626875_48627053_48627945_48628039_48628433_48628542_48628621_48628715_48629641_48629712_48629871_48629979_48630061_48630158_48630437_48630516_48630606_48630721_48630992_48631141_48631223_48631307_48631648_48631798_48632973_48633085_48633250_48633391_48633476_48633636_48635370
transcript_143754.known	chr3	-	2460	20	FSM	ENSG00000225697.13	ENST00000455886.6	2460	20	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_16	82.1678910942091	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATAAAGATTTGTCTGCT	-48632423	True	NA	-28	True	NA	NA	NA	48635441	48625745	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48626001_48626217_48626355_48626630_48626686_48626875_48627056_48627945_48628039_48628433_48628542_48628621_48628715_48629641_48629712_48629871_48629979_48630061_48630158_48630437_48630516_48630606_48630721_48630992_48631141_48631223_48631307_48631648_48631798_48631879_48632093_48632973_48633085_48633250_48633391_48633476_48633636_48635370
transcript_143755.known	chr3	-	11933	35	FSM	ENSG00000008300.17	ENST00000164024.5	11933	35	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_34	17.5383909099251	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGCCTTTTCCTGTTG	-48662222	True	NA	-2	True	AATAAA	-16	NA	48662886	48636462	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48638233_48639673_48640560_48641323_48641525_48641850_48642010_48642357_48642468_48642735_48642885_48642966_48643084_48643553_48643678_48644215_48644296_48644715_48644829_48645034_48645210_48645442_48645650_48645741_48645869_48646089_48646258_48646762_48646929_48647840_48647997_48648265_48648462_48648718_48648929_48649120_48649216_48650479_48650582_48650891_48651076_48651358_48651480_48651576_48651719_48651876_48652049_48652436_48652554_48653001_48653188_48653618_48653789_48653877_48654004_48654288_48654453_48655043_48655202_48655305_48655395_48655735_48655852_48656139_48656366_48656697_48657349_48658886
transcript_143771.known	chr3	-	2925	13	FSM	ENSG00000213672.8	ENST00000416649.6	2925	13	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_10	45.149981543001	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTTCCCTGTATGATCT	-48680461	True	NA	-5	True	AATAAA	-18	NA	48685884	48673843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48674748_48678563_48678737_48678876_48678970_48679054_48679184_48679376_48679458_48679574_48679714_48679800_48679888_48680058_48680230_48681286_48681781_48682044_48682136_48682347_48682553_48682902_48683013_48685636
transcript_143774.known	chr3	-	2977	13	FSM	ENSG00000213672.8	ENST00000294129.7	2977	13	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_10	32.0190915271221	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTTCCCTGTATGATCT	-48680492	True	NA	-5	True	AATAAA	-18	NA	48685915	48673843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48674748_48678563_48678737_48678876_48678970_48679054_48679184_48679376_48679458_48679574_48679714_48679800_48679888_48680058_48680230_48681286_48681781_48682044_48682157_48682347_48682553_48682902_48683013_48685636
transcript_143775.nic	chr3	-	3004	13	NIC	ENSG00000213672.8	novel	2977	13	NA	NA	2	0	combination_of_known_junctions	TRUE	canonical	3	32	junction_12	56.3640818449323	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTTCCCTGTATGATCT	-48680490	True	NA	-5	True	AATAAA	-18	NA	48685913	48673843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_48674748_48678563_48678737_48678876_48678970_48679054_48679184_48679376_48679458_48679574_48679714_48679800_48679888_48680058_48680230_48681286_48681781_48682044_48682157_48682347_48682553_48682902_48683042_48685636
transcript_143797.nic	chr3	-	1956	7	NIC	ENSG00000068745.15	novel	1746	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	190.91766695504	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTGCTCCTGTCATTCT	-48702853	True	NA	-2	True	AATACA	-20	NA	48717221	48688002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_48688774_48689537_48689714_48691306_48691483_48692953_48693180_48695089_48695419_48715314_48715528_48717156
transcript_143808.nic	chr3	-	1768	6	NIC	ENSG00000068745.15	novel	1746	6	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	324	junction_5	43.6394317103236	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTGCTCCTGTCATTCT	-48702878	True	NA	-2	True	AATACA	-20	NA	48717246	48688002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_48688774_48689537_48689714_48691306_48691483_48692953_48693180_48695089_48695419_48717156
transcript_143809.known	chr3	-	1746	6	FSM	ENSG00000068745.15	ENST00000328631.10	1746	6	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_5	22.5973449767888	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTGCTCCTGTCATTCT	-48702853	True	NA	-2	True	AATACA	-20	NA	48717221	48688002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48688774_48689537_48689714_48691306_48691483_48692953_48693180_48695089_48695422_48717156
transcript_143818.nnic	chr3	-	1094	5	NIC	ENSG00000068745.15	novel	1260	4	NA	NA	3	21	combination_of_known_splicesites	FALSE	canonical	3	45	junction_2	100.40667308501	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGGGTGCCTACCCGTG	-48702878	True	NA	50	True	AATAAA	-23	NA	48717246	48693763	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_48694241_48694458_48694526_48694693_48694825_48695089_48695419_48717156
transcript_143822.known	chr3	-	1309	4	FSM	ENSG00000068745.15	ENST00000432678.6	1309	4	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	101.6267681273	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGTGTCTTGTAATTC	-48717261	False	NA	-5	True	AATAAA	-16	NA	48717278	48693452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48694241_48694458_48694526_48695089_48695422_48717156
transcript_143825.known	chr3	-	1260	4	FSM	ENSG00000068745.15	ENST00000416707.1	1260	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	108.894444302728	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTACATAAAAATTAATAAA	-48702835	True	NA	-40	True	TATAAA	-34	NA	48717203	48693487	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48694241_48694693_48694825_48695089_48695419_48717156
transcript_143835.nic	chr3	-	509	3	ISM	ENSG00000068745.15	ENST00000328631.10	1746	6	0	5065	0	0	5prime_fragment	FALSE	canonical	3	386	junction_2	31.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCAAAAAGTAAGCTCCTAA	-48702853	True	NA	NA	False	NA	NA	NA	48717221	48693067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_48693180_48695089_48695422_48717156
transcript_143836.nic	chr3	-	1212	3	NIC	ENSG00000068745.15	novel	1185	3	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	202	junction_1	61	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTGTAATTCTTTGG	-48702878	True	NA	0	True	AATAAA	-21	NA	48717246	48693447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_48694241_48695089_48695419_48717156
transcript_143837.known	chr3	-	1185	3	FSM	ENSG00000068745.15	ENST00000340879.8	1185	3	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	92	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTGTAATTCTTTGG	-48702848	True	NA	0	True	AATAAA	-21	NA	48717216	48693447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48694241_48695089_48695422_48717156
transcript_143839.known	chr3	-	2490	9	FSM	ENSG00000068745.15	ENST00000433104.2	2490	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	126.358369331042	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAAATGTGTCTTGTAA	-48740342	False	NA	-8	True	AATAAA	-13	NA	48740353	48693455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48694241_48694693_48695422_48717156_48717488_48717869_48717890_48718647_48718758_48729654_48729778_48738881_48738967_48739586_48739747_48740205
transcript_143843.nic	chr3	-	896	3	NIC	ENSG00000068745.15	novel	1260	4	NA	NA	3	21	combination_of_known_junctions	FALSE	canonical	3	202	junction_1	61	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGGGTGCCTACCCGTG	-48702878	True	NA	50	True	AATAAA	-23	NA	48717246	48693763	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_48694241_48695089_48695419_48717156
transcript_143845.known	chr3	-	1124	2	FSM	ENSG00000068745.15	ENST00000417896.1	1124	2	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACTGGGTGCCTTTCTCT	-48702838	True	NA	78	True	NA	NA	NA	48717206	48694344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48695419_48717156
transcript_143846.known	chr3	-	1673	2	FSM	ENSG00000068745.15	ENST00000449610.5	1673	2	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACATATTTTATAAGAACAAA	-48702824	True	NA	29	True	AATAAA	-2	NA	48717192	48693784	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48695422_48717156
transcript_143848.known	chr3	-	1849	12	FSM	ENSG00000114302.16	ENST00000454963.5	1849	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	19.539322505321	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGAAATGGTTCTCCAGC	-48842362	True	NA	NA	False	NA	NA	NA	48847804	48747514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48747941_48751584_48751719_48752175_48752318_48756378_48756445_48765003_48765079_48765247_48765350_48772954_48773109_48782985_48783093_48790543_48790628_48793996_48794050_48807648_48807685_48847334
transcript_143851.nnic	chr3	-	4002	12	NNC	ENSG00000114302.16	novel	6492	11	NA	NA	-5	-767	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	23.3485979192197	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTAGCTGGACCTGGTGG	-48842396	True	NA	NA	False	AAAAAG	-10	NA	48847838	48748281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_48749564_48750321_48751719_48752175_48752318_48756378_48756445_48765003_48765079_48765247_48765350_48772954_48773109_48782985_48783093_48790543_48790628_48793996_48794050_48807648_48807685_48847334
transcript_143856.known	chr3	-	6492	11	FSM	ENSG00000114302.16	ENST00000265563.13	6492	11	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	7.22772439983706	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGACTTTCTGGTGCAG	-48842432	True	NA	-8	True	AATAAA	-14	NA	48847874	48746585	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48751719_48752175_48752318_48756378_48756445_48765003_48765079_48765247_48765350_48772954_48773109_48782985_48783093_48790543_48790628_48793996_48794050_48807648_48807685_48847334
transcript_14386.known	chr1	-	1678	7	FSM	ENSG00000143612.21	ENST00000368521.10	1678	7	0	0	0	0	multi-exon	FALSE	canonical	3	382	junction_6	226.214315786306	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATGAATCAGTCCTTTAT	-154209534	True	NA	-18	True	AATAAA	-22	NA	154220590	154206719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154207649_154212319_154212379_154212457_154212625_154213892_154213947_154214456_154214575_154219835_154219938_154220341
transcript_143862.known	chr3	-	3318	10	FSM	ENSG00000114302.16	ENST00000296446.12	3318	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	25.3902868567227	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGGGCATGGTGGTGG	-48842386	True	NA	NA	False	AATACA	-6	NA	48847828	48749647	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48751719_48752175_48752318_48765003_48765079_48765247_48765350_48772954_48773109_48782985_48783093_48790543_48790628_48793996_48794050_48807648_48807685_48847334
transcript_14387.nnic	chr1	-	1641	7	NNC	ENSG00000143612.21	novel	1678	7	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_6	318.869182511505	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATGAATCAGTCCTTTAT	-154209574	True	NA	-18	True	AATAAA	-22	NA	154220630	154206719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_154207649_154212319_154212379_154212457_154212625_154213892_154213947_154214456_154214575_154219835_154219938_154220418
transcript_143872.nic	chr3	-	1057	7	ISM	ENSG00000114302.16	ENST00000296446.12	3318	10	-94	15667	-48	-13976	5prime_fragment	FALSE	canonical	3	73	junction_2	4.93288286231625	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATGCAAAGAAGAGGAAGA	NA	False	NA	NA	False	NA	NA	NA	48847922	48765314	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_48765350_48772954_48773109_48782985_48783093_48790543_48790628_48793996_48794050_48807648_48807685_48847334
transcript_143873.known	chr3	+	3469	3	FSM	ENSG00000224424.8	ENST00000655796.1	3469	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGATAGGTTTGTTATTC	NA	False	NA	-3	True	AATGAA	-19	NA	48847850	48851976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_48848026_48848104_48848409_48848986
transcript_143874.known	chr3	-	1778	9	FSM	ENSG00000178537.10	ENST00000319017.5	1778	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	3.99804639792987	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGTGTTATATTTTCTT	-48898381	True	NA	-2	True	AATAAA	-25	NA	48898882	48856925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48857773_48858506_48858632_48859091_48859202_48859554_48859628_48862541_48862660_48879357_48879449_48883996_48884125_48891979_48892073_48898689
transcript_143879.nic	chr3	+	2318	18	NIC	ENSG00000177479.20	novel	2278	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	84	junction_5	205.622508293608	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAAACTATAGGATAACAC	48909221	True	NA	-56	True	NA	NA	NA	48918841	48983620	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_48918999_48922747_48922812_48924717_48924840_48927461_48927814_48945135_48945182_48961611_48961680_48964918_48964983_48967124_48967276_48968533_48968656_48970594_48970705_48973698_48973817_48974816_48974868_48974957_48974980_48979481_48979634_48980352_48980497_48981659_48981729_48982895_48982980_48983198
transcript_14388.known	chr1	-	1610	6	FSM	ENSG00000143612.21	ENST00000350592.7	1610	6	0	0	0	0	multi-exon	FALSE	canonical	3	495	junction_5	166.206377735633	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATGAATCAGTCCTTTAT	-154209568	True	NA	-18	True	AATAAA	-22	NA	154220624	154206719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154207649_154212319_154212379_154212457_154212625_154213892_154213947_154214456_154214575_154220341
transcript_143889.known	chr3	+	2278	17	FSM	ENSG00000177479.20	ENST00000449376.5	2278	17	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_3	120.151060518624	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAAACTATAGGATAACAC	48909215	True	NA	-56	True	NA	NA	NA	48918835	48983620	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_48918999_48922747_48922812_48924717_48924840_48927461_48927814_48961611_48961680_48964918_48964983_48967124_48967276_48968533_48968656_48970594_48970705_48973698_48973817_48974816_48974868_48974957_48974980_48979481_48979634_48980352_48980497_48981659_48981729_48982895_48982980_48983198
transcript_143916.known	chr3	+	4912	16	FSM	ENSG00000177479.20	ENST00000356401.9	4912	16	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_2	92.1286540056289	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCATGATCTCTGCTCA	48909221	True	NA	NA	False	NA	NA	NA	48918841	48986382	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_48918999_48922747_48922812_48927461_48927814_48961611_48961680_48964918_48964983_48967124_48967276_48968533_48968656_48970594_48970705_48973698_48973817_48974816_48974868_48974957_48974980_48979481_48979634_48980352_48980497_48981659_48981729_48982895_48982980_48983198
transcript_143928.nic	chr3	+	2221	16	NIC	ENSG00000177479.20	novel	2278	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	174.831728623077	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAAACTATAGGATAACAC	48909208	True	NA	-56	True	NA	NA	NA	48918828	48983620	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_48918999_48924717_48924840_48927461_48927814_48961611_48961680_48964918_48964983_48967124_48967276_48968533_48968656_48970594_48970705_48973698_48973817_48974816_48974868_48974957_48974980_48979481_48979634_48980352_48980497_48981659_48981729_48982895_48982980_48983198
transcript_143938.nic	chr3	+	2102	15	NIC	ENSG00000177479.20	novel	2278	17	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	164.066064344177	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAAACTATAGGATAACAC	48909205	True	NA	-56	True	NA	NA	NA	48918825	48983620	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_48918999_48927461_48927814_48961611_48961680_48964918_48964983_48967124_48967276_48968533_48968656_48970594_48970705_48973698_48973817_48974816_48974868_48974957_48974980_48979481_48979634_48980352_48980497_48981659_48981729_48982895_48982980_48983198
transcript_14394.known	chr1	-	1163	6	FSM	ENSG00000143612.21	ENST00000368519.5	1163	6	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	329.393017533766	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCTTAAAAATCTTCACT	-154209529	True	NA	NA	False	NA	NA	NA	154220585	154207175	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154207649_154212319_154212379_154212457_154212625_154214456_154214575_154219835_154219938_154220341
transcript_143956.nic	chr3	-	1845	11	ISM	ENSG00000178149.17	ENST00000341949.9	1748	12	-16	0	-16	0	intron_retention	FALSE	canonical	3	108	junction_3	30.0373101325668	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTCTTGTCATGGGGA	-49018505	False	NA	-4	True	AATAAA	-21	NA	49018596	49015487	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_49015708_49015803_49015873_49015972_49016087_49016157_49016341_49016428_49016512_49016611_49016674_49016773_49016848_49017227_49017357_49017433_49017514_49017612_49017870_49018022
transcript_143963.known	chr3	-	1886	10	FSM	ENSG00000178149.17	ENST00000460505.5	1886	10	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_5	20.6128331116537	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTCTTGTCATGGGGA	-49016722	True	NA	-4	True	AATAAA	-21	NA	49018566	49015487	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49015708_49015803_49015873_49015972_49016341_49016428_49016512_49016611_49016674_49016773_49016848_49017227_49017357_49017433_49017514_49017612_49017870_49018022
transcript_14397.known	chr1	-	1278	6	FSM	ENSG00000143612.21	ENST00000368518.5	1278	6	0	0	0	0	multi-exon	FALSE	canonical	3	382	junction_5	242.765236391045	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAATAGTTTTTCAGCACA	-154209477	True	NA	-3	True	AATAAA	-28	NA	154220533	154211733	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154212379_154212457_154212625_154213892_154213947_154214456_154214575_154219835_154219938_154220341
transcript_143974.known	chr3	+	1771	9	FSM	ENSG00000178467.18	ENST00000383729.9	1771	9	0	0	0	0	multi-exon	FALSE	canonical	1	39	junction_6	26.9278550018378	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCGCGATAGGTGCAGCGG	48989723	True	NA	65	True	NA	NA	NA	48990240	49007153	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_48990611_48990832_48990915_49001437_49001629_49002499_49002597_49004097_49004261_49004860_49005047_49005776_49005868_49006063_49006188_49006686
transcript_143975.known	chr3	+	2268	9	FSM	ENSG00000178467.18	ENST00000343546.8	2268	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	39.5347948015416	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCGGGCCCGACAAACT	48989573	True	NA	27	True	AATAAA	-17	NA	48989888	49007115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_48990611_48990832_48990915_49001437_49001629_49002499_49002597_49004097_49004261_49004860_49005171_49005717_49005868_49006063_49006188_49006686
transcript_143985.known	chr3	+	2796	8	FSM	ENSG00000178467.18	ENST00000472301.5	2796	8	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_4	7.36234212955721	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCGGGCCCGACAAACT	48989592	False	NA	27	True	AATAAA	-17	NA	48989907	49007115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_48990611_48990832_48990915_49001437_49001629_49002499_49002597_49004097_49004261_49004860_49005868_49006063_49006188_49006686
transcript_144007.known	chr3	+	4070	6	FSM	ENSG00000178252.19	ENST00000608424.6	4070	6	0	0	0	0	multi-exon	FALSE	canonical	3	527	junction_2	63.5213349985656	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGTTGTCTATGCCTCA	48997492	True	NA	13	True	AATAAA	-18	NA	49007390	49015951	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_49007532_49011634_49014117_49014209_49014294_49014382_49014500_49014599_49014719_49014824
transcript_144010.known	chr3	+	3916	6	FSM	ENSG00000178252.19	ENST00000452875.5	3916	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	243.10935810865	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGGCTCAGTGGAGGG	48997498	True	NA	95	True	NA	NA	NA	49007396	49015589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_49007532_49011420_49014117_49014209_49014294_49014382_49014500_49014599_49014719_49014824
transcript_144019.known	chr3	+	3565	5	FSM	ENSG00000178252.19	ENST00000471162.5	3565	5	0	0	0	0	multi-exon	FALSE	canonical	3	528	junction_1	59.7034337370976	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCTCAGCATGCCTTGA	48997504	True	NA	NA	False	NA	NA	NA	49007402	49015365	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_49007532_49011634_49014294_49014382_49014500_49014599_49014719_49014824
transcript_144037.known	chr3	+	651	3	FSM	ENSG00000178467.18	ENST00000475629.5	651	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	56.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTTTTCTTTTCTTTT	48989820	False	NA	6	True	AATAAA	-16	NA	48990337	48999784	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_48990611_48990832_48990915_48999488
transcript_144038.known	chr3	-	1042	1	FSM	ENSG00000221883.4	ENST00000647812.1	1042	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGCTGGCTGGTCGCT	-48918699	True	NA	NA	False	AATAAA	-35	NA	48918823	48917781	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_48917800_48918800
transcript_144039.known	chr3	-	1706	12	FSM	ENSG00000178149.17	ENST00000441576.6	1706	12	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_3	48.4839583251619	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTCTTGTCATGGGGA	-49016720	True	NA	-4	True	AATAAA	-21	NA	49018564	49015487	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49015708_49015803_49015873_49015972_49016061_49016157_49016341_49016428_49016512_49016611_49016674_49016773_49016848_49017227_49017357_49017433_49017514_49017612_49017870_49018022_49018319_49018399
transcript_144040.known	chr3	-	1748	12	FSM	ENSG00000178149.17	ENST00000341949.9	1748	12	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_3	34.2593414901519	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTCTTGTCATGGGGA	-49016736	True	NA	-4	True	AATAAA	-21	NA	49018580	49015487	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49015708_49015803_49015873_49015972_49016087_49016157_49016341_49016428_49016512_49016611_49016674_49016773_49016848_49017227_49017357_49017433_49017514_49017612_49017870_49018022_49018319_49018399
transcript_144041.known	chr3	+	902	5	FSM	ENSG00000178057.15	ENST00000326925.11	902	5	0	0	0	0	multi-exon	FALSE	canonical	3	660	junction_3	76.0476824104456	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTGATTGTTTTTCTTTT	49017574	True	NA	5	True	NA	NA	NA	49022120	49023495	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_49022222_49022345_49022539_49022701_49022769_49022875_49022977_49023055
transcript_144042.known	chr3	+	731	3	FSM	ENSG00000177479.20	ENST00000492077.5	731	3	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_2	207.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCCTGCCTCAGCCTCC	48909211	True	NA	NA	False	NA	NA	NA	48918831	48925217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_48918999_48922747_48922812_48924717
transcript_144043.known	chr3	-	1751	15	FSM	ENSG00000178035.13	ENST00000429182.6	1751	15	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	777.639760389588	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGCCTGATCTTTCAAC	-48985544	True	NA	32	True	AATAAA	-18	NA	49029426	49024324	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49025994_49026067_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028533_49028757_49028807_49029252
transcript_144046.known	chr3	-	1704	14	FSM	ENSG00000178035.13	ENST00000677480.1	1704	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	635.855524880228	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTTTAGAAAGAAAAAAGT	-48985538	True	NA	14	True	NA	NA	NA	49029420	49024342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028198_49028323_49028430_49028533_49028757_49028807_49029252
transcript_144047.known	chr3	-	1657	14	FSM	ENSG00000178035.13	ENST00000677010.1	1657	14	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_12	795.96486794702	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTTTAGAAAGAAAAAAGT	-48985516	True	NA	14	True	NA	NA	NA	49029398	49024342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026598_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028533_49028721_49028807_49029252
transcript_144048.known	chr3	-	1628	14	FSM	ENSG00000178035.13	ENST00000679117.1	1628	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	634.43961202133	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGCCTGATCTTTCAAC	-48985534	True	NA	32	True	AATAAA	-18	NA	49029416	49024324	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028533_49028757_49028766_49029252
transcript_144049.known	chr3	-	1651	14	FSM	ENSG00000178035.13	ENST00000326739.9	1651	14	0	0	0	0	multi-exon	FALSE	canonical	3	1427	junction_1	258.302904614997	2638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGCCTGATCTTTCAAC	-48985516	True	NA	32	True	AATAAA	-18	NA	49029398	49024324	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028533_49028757_49028807_49029252
transcript_144054.known	chr3	-	1881	13	FSM	ENSG00000178035.13	ENST00000676607.1	1881	13	0	0	0	0	multi-exon	FALSE	canonical	3	1427	junction_1	255.778373575423	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTTTAGAAAGAAAAAAGT	-48985539	True	NA	14	True	NA	NA	NA	49029421	49024342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028807_49029252
transcript_144055.known	chr3	-	1538	13	FSM	ENSG00000178035.13	ENST00000442157.2	1538	13	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_10	655.871996954352	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTTTAGAAAGAAAAAAGT	-48985496	True	NA	14	True	NA	NA	NA	49029378	49024342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028430_49028533_49028757_49028807_49029252
transcript_14406.known	chr1	-	1551	5	FSM	ENSG00000143612.21	ENST00000362076.8	1551	5	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	351.848244986386	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATGAATCAGTCCTTTAT	-154209563	True	NA	-18	True	AATAAA	-22	NA	154220619	154206719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154207649_154212319_154212379_154212457_154212625_154214456_154214575_154220341
transcript_144062.known	chr3	-	1749	13	FSM	ENSG00000178035.13	ENST00000472328.2	1749	13	0	0	0	0	multi-exon	FALSE	canonical	3	1427	junction_1	262.938152846296	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGCCTGATCTTTCAAC	-48985534	True	NA	32	True	AATAAA	-18	NA	49029416	49024324	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49024405_49024494_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028533_49028757_49028807_49029252
transcript_144065.known	chr3	-	2110	12	FSM	ENSG00000178035.13	ENST00000462980.2	2110	12	0	0	0	0	multi-exon	FALSE	canonical	3	1427	junction_1	279.077968311177	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAAAGTGATGCCTGAT	-48985544	True	NA	24	True	AATAAA	-10	NA	49029426	49024332	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49028533_49028757_49028807_49029252
transcript_144078.known	chr3	-	2078	13	FSM	ENSG00000178035.13	ENST00000678001.1	2078	13	0	0	0	0	multi-exon	FALSE	canonical	3	1427	junction_1	268.83772470065	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTTTAGAAAGAAAAAAGT	-48985515	True	NA	14	True	NA	NA	NA	49029397	49024342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028533_49028757
transcript_144079.known	chr3	-	2758	10	FSM	ENSG00000178035.13	ENST00000677991.1	2758	10	0	0	0	0	multi-exon	FALSE	canonical	3	1427	junction_1	294.311164804183	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTTTAGAAAGAAAAAAGT	-48985531	True	NA	14	True	NA	NA	NA	49029413	49024342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709
transcript_144086.known	chr3	-	3009	11	FSM	ENSG00000198218.11	ENST00000424300.5	3009	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_10	148.768948372972	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTTGCTGGCTGACTCT	-49093596	False	8253	-1	True	NA	NA	NA	49093611	49030211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49030645_49032182_49032274_49032621_49032774_49033119_49033229_49044389_49044505_49046424_49046580_49047068_49047247_49056861_49057891_49076708_49077039_49092396_49092457_49093254
transcript_144096.known	chr3	-	3257	10	FSM	ENSG00000198218.11	ENST00000395443.7	3257	10	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_9	41.3413970628849	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAGTGAACAACGTCTCT	-49085818	True	NA	-8	True	NA	NA	NA	49094071	49029706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49030645_49032182_49032274_49032621_49032774_49033119_49033229_49044389_49044505_49046424_49046580_49047068_49047247_49056861_49057891_49076708_49077039_49093911
transcript_14410.known	chr1	-	872	5	FSM	ENSG00000143612.21	ENST00000368516.1	872	5	0	0	0	0	multi-exon	FALSE	canonical	3	495	junction_4	185.347477727645	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATCCCAGCACTTTGGGA	-154209572	True	NA	77	True	NA	NA	NA	154220628	154212132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154212379_154212457_154212625_154213892_154213947_154214456_154214575_154220341
transcript_144149.known	chr3	-	3083	11	FSM	ENSG00000198218.11	ENST00000357496.6	3083	11	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_10	143.794436610044	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCTCCTTTATGACAAGT	-49085809	True	NA	-64	True	ATTAAA	-15	NA	49094062	49029931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49030645_49032182_49032274_49032621_49032774_49033119_49033229_49044389_49044505_49046424_49046580_49047068_49047247_49056861_49057891_49076708_49077039_49092396_49092457_49093911
transcript_144155.known	chr3	-	2449	24	FSM	ENSG00000172053.18	ENST00000306125.12	2449	24	0	0	0	0	multi-exon	FALSE	canonical	3	591	junction_23	102.016122377557	1195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGTGTTATCTCTGCA	-49090347	True	NA	-3	True	AATAAA	-22	NA	49104757	49095931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49096080_49097991_49098118_49098191_49098259_49098352_49098481_49098599_49098693_49098884_49098990_49099109_49099254_49099343_49099432_49099509_49099648_49099760_49099854_49099960_49100092_49100189_49100299_49100379_49100459_49100574_49100675_49101354_49101442_49101619_49101706_49101827_49101900_49102204_49102266_49102418_49102473_49103344_49103410_49103630_49103707_49103862_49103973_49104323_49104472_49104616
transcript_144156.known	chr3	-	2412	24	FSM	ENSG00000172053.18	ENST00000414533.5	2412	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	200.958534785696	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGAGTCTGTGTGTTATCT	-49090348	True	NA	-8	True	AATAAA	-17	NA	49104758	49095936	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49096080_49097991_49098118_49098191_49098259_49098352_49098481_49098599_49098693_49098884_49098990_49099109_49099254_49099343_49099432_49099509_49099648_49099760_49099854_49099960_49100092_49100189_49100299_49100379_49100459_49100574_49100675_49101354_49101442_49101619_49101706_49101827_49101900_49102204_49102266_49102418_49102473_49103344_49103410_49103630_49103707_49103862_49103973_49104356_49104472_49104616
transcript_144162.nic	chr3	-	2380	23	NIC	ENSG00000172053.18	novel	2449	24	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	87	junction_1	178.685512554024	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTGTGTTATCTCTGC	NA	False	NA	-4	True	AATAAA	-21	NA	49104815	49095932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_49096080_49098191_49098259_49098352_49098481_49098599_49098693_49098884_49098990_49099109_49099254_49099343_49099432_49099509_49099648_49099760_49099854_49099960_49100092_49100189_49100299_49100379_49100459_49100574_49100675_49101354_49101442_49101619_49101706_49101827_49101900_49102204_49102266_49102418_49102473_49103344_49103410_49103630_49103707_49103862_49103973_49104323_49104472_49104616
transcript_144165.known	chr3	-	2171	23	FSM	ENSG00000172053.18	ENST00000636018.1	2171	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	260.292302315355	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACAGCTAAATTCTCCTA	-49104382	False	NA	-25	True	NA	NA	NA	49104420	49095953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49096080_49097991_49098118_49098191_49098259_49098352_49098481_49098599_49098693_49098884_49098975_49099109_49099254_49099343_49099432_49099509_49099648_49099760_49099854_49099960_49100092_49100189_49100299_49100379_49100459_49100574_49100675_49101354_49101442_49101619_49101706_49101827_49101900_49102204_49102266_49102418_49102473_49103344_49103410_49103630_49103707_49103862_49103973_49104372
transcript_144210.known	chr3	-	2362	23	FSM	ENSG00000172053.18	ENST00000464962.6	2362	23	0	0	0	0	multi-exon	FALSE	canonical	3	726	junction_11	87.6464653740354	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGAGTCTGTGTGTTAT	-49104494	False	NA	-10	True	AATAAA	-15	NA	49104532	49095938	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49096080_49097991_49098118_49098191_49098259_49098352_49098481_49098599_49098693_49098884_49098990_49099109_49099254_49099343_49099432_49099509_49099648_49099760_49099854_49099960_49100092_49100189_49100299_49100379_49100459_49100574_49100675_49101354_49101442_49101619_49101706_49101827_49101900_49102204_49102266_49102418_49102473_49103344_49103410_49103630_49103707_49103862_49103973_49104323
transcript_144218.nic	chr3	-	4808	27	NIC	ENSG00000172046.20	novel	4721	27	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_24	66.1174318383542	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGTGACTGTGATCCACC	-49116609	True	NA	-22	True	AATAAA	-16	NA	49120955	49108049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_49108529_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115945_49116046_49116163_49116279_49116352_49116450_49116608_49116726_49116944_49117058_49117362_49117436_49117571_49117656_49117786_49117946_49118121_49119021_49119282_49120755
transcript_144220.known	chr3	-	4706	27	FSM	ENSG00000172046.20	ENST00000417901.6	4721	27	15	0	-1	0	multi-exon	FALSE	canonical	3	156	junction_17	57.6146143524562	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGTGACTGTGATCCACC	-49116462	True	NA	-22	True	AATAAA	-16	NA	49120808	49108049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49108529_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115945_49116046_49116163_49116279_49116352_49116450_49116608_49116726_49116944_49117058_49117362_49117436_49117571_49117656_49117831_49117946_49118121_49119021_49119282_49120755
transcript_144222.known	chr3	-	4719	27	FSM	ENSG00000172046.20	ENST00000453664.5	4719	27	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_22	82.9671283021066	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTGTAATTTTTTTTG	-49116592	True	NA	-38	True	TATAAA	-18	NA	49120938	49108130	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49108529_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115939_49116046_49116163_49116279_49116352_49116450_49116608_49116726_49116944_49117058_49117362_49117466_49117571_49117656_49117831_49117946_49118121_49119021_49119282_49120755
transcript_144227.nic	chr3	-	4727	27	NIC	ENSG00000172046.20	novel	4721	27	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_24	66.1174318383542	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTGTAATTTTTTTTG	-49116609	True	NA	-38	True	TATAAA	-18	NA	49120955	49108130	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_49108529_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115945_49116046_49116163_49116279_49116352_49116450_49116608_49116726_49116944_49117058_49117362_49117436_49117571_49117656_49117786_49117946_49118121_49119021_49119282_49120755
transcript_144231.nic	chr3	-	4840	27	FSM	ENSG00000172046.20	ENST00000306026.6	4665	27	-137	-38	-17	0	multi-exon	FALSE	canonical	3	56	junction_1	80.6323840708356	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCGTCTCTCTGTCTCA	-49116609	True	NA	-3	True	AATAAA	-19	NA	49120955	49108674	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49109186_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115945_49116046_49116163_49116279_49116352_49116450_49116608_49116726_49116944_49117058_49117362_49117436_49117571_49117656_49117786_49117946_49118121_49119021_49119282_49120755
transcript_144233.known	chr3	-	4677	27	FSM	ENSG00000172046.20	ENST00000434032.6	4677	27	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	76.8044180959224	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGGCCTCAGGCTTGGC	-49116485	True	NA	-81	True	NA	NA	NA	49120831	49108752	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49109186_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115939_49116046_49116163_49116279_49116352_49116450_49116608_49116726_49116944_49117058_49117362_49117436_49117571_49117656_49117831_49117946_49118121_49119021_49119282_49120755
transcript_144249.known	chr3	-	4559	26	FSM	ENSG00000172046.20	ENST00000398888.6	4559	26	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_21	92.5560068282983	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCGTCTCTCTGTCTCA	-49116592	True	NA	-3	True	AATAAA	-19	NA	49120938	49108674	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49109186_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115939_49116046_49116163_49116279_49116352_49116450_49116608_49116726_49116944_49117436_49117571_49117656_49117831_49117946_49118121_49119021_49119282_49120755
transcript_14426.known	chr1	+	3864	26	FSM	ENSG00000143569.19	ENST00000361546.6	3864	26	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_25	243.137636741003	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGCCTATTCTTGCTC	154224964	True	NA	13	True	TATAAA	-20	NA	154225081	154270853	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154266500_154266569_154268756_154268955_154270199
transcript_144272.known	chr3	-	5674	33	FSM	ENSG00000172037.14	ENST00000418109.5	5674	33	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_32	35.6251644733045	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGTCTGGACTCTGA	NA	False	NA	-1	True	AATAAA	-17	NA	49133118	49121113	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49121363_49121432_49121593_49121683_49121861_49121943_49122086_49122162_49122371_49122703_49123053_49123131_49123374_49123446_49123632_49123727_49124101_49124189_49124287_49124394_49124613_49124700_49124926_49125005_49125170_49125252_49125485_49125746_49125891_49125966_49126160_49126364_49126498_49128457_49128586_49128660_49128820_49129019_49129153_49129244_49129325_49129603_49129717_49129838_49130019_49130230_49130420_49130739_49130861_49130949_49131153_49131378_49131443_49131534_49131724_49132115_49132190_49132269_49132406_49132490_49132664_49132791_49132869_49132954
transcript_144273.known	chr3	-	5692	32	FSM	ENSG00000172037.14	ENST00000305544.9	5692	32	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_26	33.0651298133451	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGTCTGGACTCTGA	-49129078	True	NA	-1	True	AATAAA	-17	NA	49133050	49121113	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49121363_49121432_49121593_49121683_49121861_49121943_49122086_49122162_49122371_49122703_49123053_49123131_49123374_49123446_49123632_49123727_49124101_49124189_49124287_49124394_49124613_49124700_49124926_49125005_49125170_49125252_49125485_49125746_49125891_49125966_49126160_49126364_49126498_49128457_49128586_49128660_49128820_49129019_49129153_49129244_49129325_49129603_49129717_49129838_49130019_49130230_49130420_49130739_49130861_49130949_49131153_49131378_49131443_49131534_49131724_49132115_49132190_49132269_49132406_49132490_49132664_49132791
transcript_144277.known	chr3	-	1791	2	FSM	ENSG00000177352.10	ENST00000321895.7	1791	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCAGTCTCCCTGCCCA	-49161377	True	NA	NA	False	NA	NA	NA	49166331	49162534	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49164261_49166266
transcript_144281.known	chr3	+	1972	6	FSM	ENSG00000185909.15	ENST00000332780.4	1972	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	3.13687742827162	151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGGACCCTGGTGTGA	49171167	True	NA	14	True	AGTAAA	-18	NA	49171597	49176486	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_49171686_49172635_49173146_49174238_49174404_49174741_49174967_49175061_49175164_49175604
transcript_144284.known	chr3	-	4070	22	FSM	ENSG00000114316.13	ENST00000265560.9	4070	22	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_16	50.3283549369299	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGTAGGGCCAGCGGCCT	-49337036	True	NA	NA	False	NA	NA	NA	49340053	49277143	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49278452_49278813_49278903_49280743_49280848_49283986_49284137_49284465_49284585_49284848_49284920_49286097_49286326_49292509_49292599_49294406_49294599_49297869_49297965_49298551_49298636_49300466_49300692_49302383_49302543_49305714_49305889_49310619_49310738_49311513_49311655_49324701_49324764_49324893_49325040_49325718_49325846_49327685_49327817_49335468_49335597_49339923
transcript_144287.known	chr3	-	3222	21	FSM	ENSG00000114316.13	ENST00000351842.8	3222	21	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_15	52.3656375880214	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCACTGATATGGGTT	-49337016	True	NA	-38	True	AGTAAA	-17	NA	49340033	49277830	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49278452_49278813_49278903_49280743_49280848_49283986_49284137_49284465_49284585_49284848_49284920_49286097_49286326_49292509_49292599_49294406_49294599_49297869_49297965_49298551_49298636_49300466_49300692_49302383_49302543_49305714_49305889_49310619_49310738_49324701_49324764_49324893_49325040_49325718_49325846_49327685_49327817_49335468_49335597_49339923
transcript_144296.known	chr3	-	589	2	FSM	ENSG00000233276.8	ENST00000646881.2	589	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTACGCAGGTACAGCCGC	-49358205	False	NA	NA	False	NA	NA	NA	49358325	49357476	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49357767_49358026
transcript_144297.known	chr3	-	708	2	FSM	ENSG00000233276.8	ENST00000643797.1	708	2	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGTGCCGGGTGTCAG	-49358205	False	NA	-33	True	NA	NA	NA	49358325	49357200	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49357748_49358164
transcript_144298.known	chr3	-	1135	1	FSM	ENSG00000233276.8	ENST00000419349.2	1135	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTGTATGTCCTGTG	-49358192	False	NA	-10	True	AATAAA	-18	NA	49358312	49357177	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49357200_49358300
transcript_144299.known	chr3	-	1897	6	FSM	ENSG00000067560.14	ENST00000445425.6	1897	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1177.91537896404	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATCCTGTTGTTTGTGTT	-49349825	True	NA	-5	True	AATAAA	-20	NA	49411968	49359139	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49360383_49362495_49362627_49368427_49368549_49375433_49375592_49406711_49406807_49411819
transcript_14430.known	chr1	+	842	7	FSM	ENSG00000143575.15	ENST00000447768.6	842	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	248.544876341387	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTTATTCCTGGGACGT	154266801	True	NA	NA	False	NA	NA	NA	154272619	154275663	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154272777_154273335_154273535_154273773_154273962_154274949_154275002_154275153_154275261_154275392_154275484_154275615
transcript_144300.known	chr3	-	1971	5	FSM	ENSG00000067560.14	ENST00000679208.1	1971	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1190.21951756808	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTATCCTGTTGTTT	-49411611	False	NA	-10	True	AATAAA	-15	NA	49411645	49359144	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49360383_49362495_49362627_49368427_49368549_49375433_49375592_49411322
transcript_144301.known	chr3	+	2146	3	FSM	ENSG00000145022.5	ENST00000273590.4	1930	3	-217	1	-6	-1	multi-exon	TRUE	canonical	3	38	junction_2	1.5	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGGTTGTTGTGGTTATTC	49412191	False	NA	3	True	ATTAAA	-12	NA	49412205	49416475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_49412641_49413055_49413111_49414819
transcript_144303.known	chr3	-	1805	5	FSM	ENSG00000067560.14	ENST00000418115.6	1805	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1022.40901184409	1309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTATCCTGTTGTTT	-49349833	True	NA	-10	True	AATAAA	-15	NA	49411976	49359144	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49360383_49362495_49362627_49368427_49368549_49375433_49375592_49411819
transcript_144304.known	chr3	-	1582	3	FSM	ENSG00000067560.14	ENST00000676712.2	1582	3	0	0	0	0	multi-exon	FALSE	canonical	3	717	junction_1	763.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATCCTGTTGTTTGTGTT	-49349857	True	NA	-5	True	AATAAA	-20	NA	49412000	49359139	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49360383_49375433_49375592_49411819
transcript_144305.known	chr3	-	1641	4	FSM	ENSG00000067560.14	ENST00000454011.7	1641	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1055.2485752445	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATCCTGTTGTTTGTGTT	-49349785	True	NA	-5	True	AATAAA	-20	NA	49411928	49359139	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49360383_49362495_49362627_49375433_49375592_49411819
transcript_144306.known	chr3	-	1944	6	FSM	ENSG00000067560.14	ENST00000422781.6	1944	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1118.3048958133	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATCCTGTTGTTTGTGTTG	-49349827	True	NA	-4	True	AATAAA	-21	NA	49411970	49359138	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49360383_49360927_49361067_49362495_49362627_49368427_49368549_49375433_49375592_49411819
transcript_144307.known	chr3	-	2260	9	FSM	ENSG00000145020.16	ENST00000635889.1	2260	9	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_2	230.913268349829	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCACATTCCCAAGTTG	-49418706	True	NA	NA	False	NA	NA	NA	49422473	49416984	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49417719_49417817_49417974_49418166_49418229_49418970_49419152_49419259_49419406_49419709_49420343_49421491_49421573_49422103_49422258_49422360
transcript_144309.known	chr3	-	1914	9	FSM	ENSG00000145020.16	ENST00000636865.1	1914	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	208.109196096665	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACTCCACTGAATCCTGA	-49418700	True	NA	-57	True	NA	NA	NA	49422467	49416828	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49419394_49419709_49419789_49420210_49420343_49421491_49421573_49422103_49422258_49422360
transcript_14431.known	chr1	+	1151	7	FSM	ENSG00000143575.15	ENST00000483970.6	1151	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	247.433099824758	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTGTCTTGGTTTTG	154266790	True	NA	27	True	AATAAA	-16	NA	154272608	154275873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154272777_154273335_154273599_154273749_154273962_154274949_154275002_154275153_154275261_154275392_154275484_154275615
transcript_144311.known	chr3	-	1783	8	FSM	ENSG00000145020.16	ENST00000638063.1	1783	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_6	160.725015514838	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGCAGGGTGGGCTTCCT	-49418693	True	NA	-126	True	NA	NA	NA	49422460	49416897	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49419789_49420210_49420343_49422103_49422272_49422360
transcript_144312.known	chr3	-	2403	8	FSM	ENSG00000145020.16	ENST00000636991.1	2403	8	0	0	0	0	multi-exon	TRUE	canonical	3	354	junction_3	84.732231296055	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCTTACTTGCCAGTCT	-49418706	True	NA	-22	True	ATTAAA	-3	NA	49422473	49416793	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49420343_49421491_49421573_49422103_49422272_49422360
transcript_144313.known	chr3	-	1991	8	FSM	ENSG00000145020.16	ENST00000637114.1	1991	8	0	0	0	0	multi-exon	FALSE	canonical	3	397	junction_7	69.4670675168295	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTGATCTTTGCCCCT	-49418675	True	NA	-89	True	NA	NA	NA	49422442	49416860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49417719_49417817_49417974_49418970_49419406_49419709_49419789_49420210_49420343_49421491_49421573_49422103_49422272_49422360
transcript_144315.known	chr3	-	2448	7	FSM	ENSG00000145020.16	ENST00000638092.1	2448	7	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_6	164.121905911429	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCACTGAATCCTGAAAAAA	-49418687	True	NA	-52	True	NA	NA	NA	49422454	49416823	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49417719_49417817_49417974_49418970_49419406_49419709_49420343_49421491_49421573_49422103_49422258_49422360
transcript_144321.known	chr3	-	1921	7	FSM	ENSG00000145029.14	ENST00000615713.4	1921	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	9.97914491994847	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGACTGCTGGCTGCCTGTG	-49427551	True	NA	-4	True	AATAAA	-15	NA	49429288	49422946	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49423506_49424161_49424875_49424948_49425054_49425366_49425439_49425882_49425997_49426251_49426429_49429107
transcript_144324.known	chr3	-	2040	7	FSM	ENSG00000145029.14	ENST00000423832.5	2040	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	9.97914491994847	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGGGCCTGGTATGCAGT	-49427571	True	NA	-50	True	NA	NA	NA	49429308	49422992	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49423564_49424074_49424875_49424948_49425054_49425366_49425439_49425882_49425997_49426251_49426429_49429107
transcript_144326.known	chr3	-	1509	6	FSM	ENSG00000145020.16	ENST00000636597.1	1509	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	213.116869346375	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAACTTCCTTCTTACTTG	-49418724	True	NA	-29	True	NA	NA	NA	49422491	49416800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49417719_49419709_49419789_49420210_49420343_49421491_49421573_49422103_49422272_49422360
transcript_14433.known	chr1	+	1109	7	FSM	ENSG00000143575.15	ENST00000328703.12	1109	7	0	0	0	0	multi-exon	FALSE	canonical	3	583	junction_2	40.0277681394082	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTCTTGGTTTTGTC	154266810	True	NA	29	True	AATAAA	-18	NA	154272628	154275875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154272777_154273335_154273599_154273773_154273962_154274949_154275002_154275153_154275261_154275392_154275484_154275615
transcript_144336.known	chr3	+	4517	5	FSM	ENSG00000173402.12	ENST00000673708.1	4517	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	185.074984803457	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCAAATTGTTTTATTAA	49462325	True	NA	17	True	ACTAAA	-12	NA	49470295	49534492	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_49470434_49487253_49487416_49488625_49488746_49510418_49510820_49530796
transcript_14434.known	chr1	+	914	7	FSM	ENSG00000143575.15	ENST00000457918.6	914	7	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	221.147512358205	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGGCTTGGATATGTG	154266770	True	NA	-62	True	NA	NA	NA	154272588	154275784	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154272777_154273479_154273599_154273773_154273962_154274949_154275002_154275153_154275261_154275392_154275484_154275615
transcript_144340.known	chr3	+	5582	4	FSM	ENSG00000173402.12	ENST00000538711.5	5582	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	199.902198309295	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCATCTGGGCATCTGT	49462161	True	NA	NA	False	AATAAA	-23	NA	49470131	49535618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_49470434_49476848_49476906_49510418_49510820_49530796
transcript_144341.known	chr3	+	730	4	FSM	ENSG00000173402.12	ENST00000452060.6	730	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	199.902198309295	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACACGGCTGGGGGCCAA	49462308	True	NA	NA	False	NA	NA	NA	49470278	49530913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_49470434_49476848_49476906_49510418_49510820_49530796
transcript_144343.known	chr3	+	5676	4	FSM	ENSG00000173402.12	ENST00000541308.5	5676	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	204.845199005384	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCATCTGGGCATCTGT	49462161	True	NA	NA	False	AATAAA	-23	NA	49470131	49535618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_49470434_49492822_49492974_49510418_49510820_49530796
transcript_144345.known	chr3	+	5576	3	FSM	ENSG00000173402.12	ENST00000515359.6	5576	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	212	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCATCTGGGCATCTGT	49468623	False	NA	NA	False	AATAAA	-23	NA	49468702	49535618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_49469056_49510418_49510820_49530796
transcript_144346.known	chr3	+	5387	3	FSM	ENSG00000173402.12	ENST00000308775.7	5387	3	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_1	69.5	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCGTTGCATCTGGGCATC	49462296	True	NA	NA	False	AATAAA	-20	NA	49470266	49535615	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_49470434_49510418_49510820_49530796
transcript_144349.known	chr3	+	579	3	FSM	ENSG00000173402.12	ENST00000421560.5	579	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	186.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCACTGGGACTCACAGA	49462161	True	NA	NA	False	NA	NA	NA	49470131	49530831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_49470275_49510418_49510820_49530796
transcript_144389.known	chr3	+	4255	39	FSM	ENSG00000164068.16	ENST00000327697.11	4255	39	0	0	0	0	multi-exon	TRUE	canonical	2	83	junction_10	28.3313887768973	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGCCCTGGCCCTTCT	49686733	True	NA	15	True	ATTAAA	-16	NA	49689556	49721529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_49689607_49691129_49691248_49691424_49691510_49697142_49697223_49697362_49697458_49697884_49697940_49698051_49698138_49698439_49698527_49698754_49698823_49698979_49699106_49699467_49699583_49699667_49699773_49700226_49700353_49700471_49700565_49700635_49700710_49701490_49701609_49701810_49701911_49702082_49702145_49702333_49702406_49702632_49702754_49703426_49703529_49704649_49704757_49704983_49705183_49705533_49705680_49705981_49706066_49706790_49706899_49712478_49712657_49713512_49713588_49713737_49713826_49713909_49713998_49714089_49714175_49715574_49715715_49715821_49716011_49716101_49716178_49716392_49716478_49720510_49720654_49720799_49720895_49721019_49721106_49721184
transcript_14439.known	chr1	+	1284	6	FSM	ENSG00000143575.15	ENST00000531435.5	1284	6	0	0	0	0	multi-exon	FALSE	canonical	3	629	junction_2	28.7012194862866	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTCTTGGTTTTGTC	154266810	True	NA	29	True	AATAAA	-18	NA	154272628	154275875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154272777_154273335_154273962_154274949_154275002_154275153_154275261_154275392_154275484_154275615
transcript_144394.nic	chr3	+	4428	39	NIC	ENSG00000164068.16	novel	4255	39	NA	NA	32	0	combination_of_known_junctions	FALSE	canonical	2	22	junction_1	34.2886658223693	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCCCTGGCCCTGGCCCT	49686773	True	NA	12	True	ATTAAA	-13	NA	49689596	49721526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_49689823_49691129_49691248_49691424_49691510_49697142_49697223_49697362_49697458_49697884_49697940_49698051_49698138_49698439_49698527_49698754_49698823_49698979_49699106_49699467_49699583_49699667_49699773_49700226_49700353_49700471_49700565_49700635_49700710_49701490_49701609_49701810_49701911_49702082_49702145_49702333_49702406_49702632_49702754_49703426_49703529_49704649_49704757_49704983_49705183_49705533_49705680_49705981_49706066_49706790_49706899_49712478_49712657_49713512_49713588_49713737_49713826_49713909_49713998_49714089_49714175_49715574_49715715_49715821_49716011_49716101_49716178_49716392_49716478_49720510_49720654_49720799_49720895_49721019_49721106_49721184
transcript_14441.known	chr1	+	771	6	FSM	ENSG00000143575.15	ENST00000532105.1	771	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	267.263615181715	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCCAAACTGACCAATAAAA	154266849	True	NA	-7	True	NA	NA	NA	154272667	154275839	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154272777_154273773_154273962_154274949_154275002_154275153_154275261_154275392_154275484_154275615
transcript_144429.known	chr3	-	6108	10	FSM	ENSG00000173540.14	ENST00000480687.5	6108	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_9	67.2283743741261	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTTGCAGACAATGGCG	-49721358	True	NA	-15	True	AATAAA	-23	NA	49723951	49716843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49721884_49721964_49722148_49722230_49722359_49722431_49722511_49722595_49722755_49722971_49723115_49723253_49723303_49723391_49723473_49723597_49723732_49723839
transcript_14443.known	chr1	+	5974	28	FSM	ENSG00000143515.19	ENST00000368489.6	5974	28	0	0	0	0	multi-exon	TRUE	canonical	2	14	junction_11	5.84739633475854	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTGTAATTTGTCTCT	154322050	True	NA	18	True	TATAAA	-15	NA	154325524	154351304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154325703_154328104_154328173_154330395_154330455_154330814_154330929_154331047_154331147_154331443_154331506_154331605_154331679_154331953_154332025_154332617_154332698_154334106_154334266_154334502_154334592_154337347_154337545_154340853_154341063_154342479_154342524_154342795_154342962_154343112_154343302_154343452_154343569_154343892_154344058_154344142_154344255_154344394_154344501_154344640_154344786_154344970_154345155_154345321_154345546_154345799_154345884_154346230_154346477_154346619_154346759_154348407_154348539_154348839
transcript_144431.known	chr3	-	3144	9	FSM	ENSG00000173540.14	ENST00000308388.7	3144	9	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_2	19.5176202442818	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTCTTCCAGACTCCCC	-49721358	True	NA	-7	True	AATAAA	-19	NA	49723951	49719915	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49721884_49721964_49722148_49722230_49722359_49722431_49722511_49722595_49722755_49722971_49723115_49723253_49723303_49723391_49723473_49723597
transcript_144437.known	chr3	-	3217	8	FSM	ENSG00000173540.14	ENST00000308375.10	3217	8	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	18.8289833035376	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTGGAGACATTCTTCCA	-49721358	True	NA	-15	True	AATAAA	-11	NA	49723951	49719923	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49722148_49722230_49722359_49722431_49722511_49722595_49722755_49722971_49723115_49723253_49723303_49723391_49723473_49723597
transcript_144449.known	chr3	-	2856	1	FSM	ENSG00000176020.9	ENST00000320431.8	2856	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCGGTCCTCCGTGTGTTC	-49717091	False	2593	0	True	AATAAA	-38	NA	49719684	49716828	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49716800_49719700
transcript_144456.known	chr3	-	4471	6	FSM	ENSG00000176095.12	ENST00000321599.9	4471	6	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	15.3805071437843	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGAGTCTGTCTTTGTGAA	-49781564	True	NA	-1	True	AATAAA	-16	NA	49786542	49724293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49727656_49728102_49728279_49732790_49732973_49738211_49738423_49747817_49748169_49786353
transcript_144457.known	chr3	-	1815	6	FSM	ENSG00000176095.12	ENST00000468463.5	1815	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	53.7289493662402	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGGCTCTGACTGGT	-49781562	True	NA	1	True	TATAAA	-44	NA	49786540	49726912	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49727621_49728102_49728279_49732790_49732973_49738211_49738423_49747817_49748169_49786353
transcript_144462.known	chr3	-	4117	5	FSM	ENSG00000176095.12	ENST00000395238.5	4117	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	54.6214243680994	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCGAGTCTGTCTTTGTGA	-49781562	True	NA	-2	True	AATAAA	-15	NA	49786540	49724294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49727656_49728102_49728279_49732790_49732973_49738211_49738423_49786353
transcript_144466.known	chr3	+	1033	2	FSM	ENSG00000185614.7	ENST00000333323.6	1033	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGGCTCCATACCCCT	49802976	True	NA	NA	False	AATAAA	-17	NA	49803260	49805030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_49803444_49804180
transcript_144469.nic	chr3	-	2000	15	NIC	ENSG00000183763.9	novel	2023	15	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_13	42.6999498159625	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTCTTCCTGGTTCTGA	-49854304	True	NA	-7	True	AATAAA	-19	NA	49856589	49828600	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_49829226_49829457_49829509_49829616_49829767_49830019_49830069_49831915_49832069_49839771_49839861_49840283_49840374_49840984_49841073_49841825_49841940_49842452_49842548_49843800_49843929_49844540_49844581_49847524_49847561_49848142_49848201_49856355
transcript_144471.known	chr3	-	2023	15	FSM	ENSG00000183763.9	ENST00000331456.7	2023	15	0	0	0	0	multi-exon	TRUE	canonical	3	106	junction_11	24.1564838974076	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTCTTCCTGGTTCTGA	-49854279	True	NA	-7	True	AATAAA	-19	NA	49856564	49828600	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49829226_49829457_49829509_49829616_49829767_49830019_49830069_49831915_49832069_49839771_49839861_49840283_49840374_49840984_49841073_49841825_49841940_49842452_49842548_49843800_49843929_49844540_49844581_49847524_49847609_49848142_49848201_49856355
transcript_144472.nic	chr3	-	2137	15	NIC	ENSG00000183763.9	novel	2023	15	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_11	41.2739108188904	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTCTTCCTGGTTCTGA	-49854304	True	NA	-7	True	AATAAA	-19	NA	49856589	49828600	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_49829226_49829457_49829509_49829616_49829767_49830019_49830069_49831915_49832069_49839771_49839861_49840283_49840374_49840984_49841073_49841825_49841940_49842452_49842548_49843800_49844018_49844540_49844581_49847524_49847609_49848142_49848201_49856355
transcript_144479.nnic	chr3	-	1934	14	NIC	ENSG00000183763.9	novel	2023	15	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_8	43.8421050762254	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTCTTCCTGGTTCTGA	-49854304	True	NA	-7	True	AATAAA	-19	NA	49856589	49828600	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_49829226_49829457_49829509_49829616_49829767_49830019_49830069_49831915_49832069_49839771_49839861_49840283_49840374_49840984_49841073_49842452_49842548_49843800_49843929_49844540_49844581_49847524_49847609_49848142_49848201_49856355
transcript_144485.nic	chr3	-	2260	14	NIC	ENSG00000183763.9	novel	2023	15	NA	NA	-15	0	intron_retention	FALSE	canonical	3	106	junction_10	24.765408209577	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATTAAAAAAAAAAAACAA	-49854304	True	NA	-27	True	NA	NA	NA	49856589	49828620	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_49829509_49829616_49829767_49830019_49830069_49831915_49832069_49839771_49839861_49840283_49840374_49840984_49841073_49841825_49841940_49842452_49842548_49843800_49843929_49844540_49844581_49847524_49847609_49848142_49848201_49856355
transcript_144514.known	chr3	-	1475	12	FSM	ENSG00000164076.17	ENST00000466940.5	1475	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	145.110046584772	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGATGGGCAGGAGGGTGG	-49862036	True	NA	NA	False	NA	NA	NA	49869909	49859292	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49859677_49859769_49859882_49860170_49860259_49860470_49860550_49860715_49860853_49860942_49861019_49861179_49861301_49861438_49861449_49861790_49861866_49862044_49862177_49862293_49862403_49869757
transcript_144518.known	chr3	-	2905	12	FSM	ENSG00000164076.17	ENST00000488336.5	2905	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	113.922040909381	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCCACCCTCTCGCCTT	-49862033	True	NA	-15	True	AATAAA	-18	NA	49869906	49857988	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49859677_49859769_49859882_49860170_49860259_49860470_49860550_49860715_49860853_49860942_49861019_49861179_49861301_49861438_49861578_49861790_49861866_49862044_49862177_49862293_49862403_49869757
transcript_144521.known	chr3	-	1589	12	FSM	ENSG00000164076.17	ENST00000487726.5	1589	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	139.51883074421	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCTTCTCACTGTACATA	-49862030	True	NA	NA	False	NA	NA	NA	49869903	49859260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49859677_49859769_49859882_49860170_49860259_49860470_49860550_49860715_49860853_49860942_49861019_49861179_49861301_49861438_49861578_49861790_49861866_49862085_49862177_49862293_49862403_49869757
transcript_144531.nic	chr3	-	3162	11	NIC	ENSG00000164076.17	novel	2905	12	NA	NA	-15	0	intron_retention	FALSE	canonical	0	0	junction_6	119.208892285769	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCCACCCTCTCGCCTT	-49862077	True	NA	-15	True	AATAAA	-18	NA	49869950	49857988	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_49859677_49859769_49859882_49860170_49860259_49860470_49860550_49860715_49860853_49860942_49861019_49861179_49861301_49861438_49861866_49862044_49862177_49862293_49862403_49869757
transcript_144535.known	chr3	-	2818	11	FSM	ENSG00000164076.17	ENST00000463537.5	2818	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	143.550165447484	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCCACCCTCTCGCCTT	-49862058	True	NA	-15	True	AATAAA	-18	NA	49869931	49857988	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49859677_49860170_49860259_49860470_49860550_49860715_49860853_49860942_49861019_49861179_49861301_49861438_49861578_49861790_49861866_49862044_49862177_49862293_49862403_49869757
transcript_14454.known	chr1	+	5764	10	FSM	ENSG00000160712.13	ENST00000368485.8	5764	10	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_6	2.16024689946929	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTTGAAATGTAATTATTG	154405323	True	NA	4	True	AATAAA	-16	NA	154405342	154469450	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154405715_154429195_154429445_154430482_154430607_154434518_154434701_154434989_154435157_154435968_154436111_154448124_154448172_154449910_154449981_154454487_154454582_154465133
transcript_144541.known	chr3	-	2998	11	FSM	ENSG00000164076.17	ENST00000477224.6	2998	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	112.964109344517	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCCACCCTCTCGCCTT	-49862033	True	NA	-15	True	AATAAA	-18	NA	49869906	49857988	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49859882_49860170_49860259_49860470_49860550_49860715_49860853_49860942_49861019_49861179_49861301_49861438_49861578_49861790_49861866_49862044_49862177_49862293_49862403_49869757
transcript_144542.known	chr3	-	1688	11	FSM	ENSG00000164076.17	ENST00000467248.5	1688	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	146.508020258278	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCTTCTCACTGTACATA	-49862033	True	NA	NA	False	NA	NA	NA	49869906	49859260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49859882_49860170_49860259_49860470_49860550_49860715_49860853_49860942_49861019_49861179_49861301_49861438_49861578_49861790_49861866_49862044_49862177_49862331_49862403_49869757
transcript_144547.nic	chr3	-	3311	10	NIC	ENSG00000164076.17	novel	2905	12	NA	NA	-3	0	intron_retention	FALSE	canonical	3	194	junction_1	60.2734509455771	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCCACCCTCTCGCCTT	-49862065	True	NA	-15	True	AATAAA	-18	NA	49869938	49857988	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_49859677_49859769_49859882_49860170_49860259_49860470_49860550_49860715_49860853_49860942_49861301_49861438_49861866_49862044_49862177_49862293_49862403_49869757
transcript_144551.known	chr3	-	2913	10	FSM	ENSG00000164076.17	ENST00000296471.11	2913	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	119.056579556959	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCCACCCTCTCGCCTT	-49862032	True	NA	-15	True	AATAAA	-18	NA	49869905	49857988	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49859882_49860170_49860259_49860470_49860550_49860715_49860845_49861179_49861301_49861438_49861578_49861790_49861866_49862044_49862177_49862293_49862403_49869757
transcript_144554.nic	chr3	-	3255	10	NIC	ENSG00000164076.17	novel	2998	11	NA	NA	-15	0	intron_retention	FALSE	canonical	0	0	junction_5	118.397113745268	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCCACCCTCTCGCCTT	-49862077	True	NA	-15	True	AATAAA	-18	NA	49869950	49857988	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_49859882_49860170_49860259_49860470_49860550_49860715_49860853_49860942_49861019_49861179_49861301_49861438_49861866_49862044_49862177_49862293_49862403_49869757
transcript_144556.known	chr3	-	3157	10	FSM	ENSG00000164076.17	ENST00000475665.5	3157	10	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_6	35.9258495608199	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCACCCTCTCGCCTTT	-49862030	True	NA	-14	True	AATAAA	-19	NA	49869903	49857987	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49859882_49860170_49860259_49860470_49860550_49860715_49860853_49860942_49861301_49861438_49861578_49861790_49861866_49862044_49862177_49862293_49862403_49869757
transcript_144558.nic	chr3	-	3406	9	NIC	ENSG00000164076.17	novel	2905	12	NA	NA	-8	0	intron_retention	FALSE	canonical	3	194	junction_1	63.5028296613623	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCCACCCTCTCGCCTT	-49862070	True	NA	-15	True	AATAAA	-18	NA	49869943	49857988	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_49859677_49859769_49859882_49860170_49860259_49860470_49860550_49860715_49861301_49861438_49861866_49862044_49862177_49862293_49862403_49869757
transcript_14456.known	chr1	+	3217	9	FSM	ENSG00000160712.13	ENST00000344086.8	3217	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	3.9350190596743	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTCCCTATTAGAGAAG	NA	False	NA	NA	False	AAAAAG	-19	NA	154405222	154466877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154405715_154429195_154429445_154430482_154430607_154434518_154434701_154434989_154435157_154435968_154436111_154448124_154448172_154449910_154449981_154465133
transcript_144570.nic	chr3	-	3495	8	NIC	ENSG00000164076.17	novel	2998	11	NA	NA	-4	0	intron_retention	FALSE	canonical	3	335	junction_4	24.0407816776716	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCCACCCTCTCGCCTT	-49862066	True	NA	-15	True	AATAAA	-18	NA	49869939	49857988	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_49859882_49860170_49860259_49860470_49860550_49860715_49861301_49861438_49861866_49862044_49862177_49862293_49862403_49869757
transcript_144579.known	chr3	-	598	5	FSM	ENSG00000164076.17	ENST00000498324.5	598	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	157.439670985429	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGATCGTGCACAGGAATC	-49862032	True	NA	NA	False	NA	NA	NA	49869905	49861463	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49861578_49861790_49861866_49862044_49862177_49862273_49862403_49869757
transcript_14458.known	chr1	+	1776	12	FSM	ENSG00000163239.12	ENST00000368480.3	1776	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.02851895445316	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGAGTGATTGATACTT	NA	False	NA	NA	False	AATAAA	-19	NA	154502971	154548147	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154503030_154506876_154506906_154507240_154507321_154508422_154508482_154520303_154520375_154521322_154521480_154542023_154542067_154542730_154542822_154543962_154544111_154544371_154544518_154544794_154544950_154547408
transcript_144580.known	chr3	-	4772	20	FSM	ENSG00000164078.14	ENST00000296474.8	4772	20	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_15	2.90762680356487	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTAGCAAACAGTGTGAAA	-49903696	True	NA	-25	True	AATAAA	-27	NA	49903873	49887001	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49887563_49889923_49890061_49890484_49890651_49891196_49891307_49891398_49891581_49891757_49891839_49895166_49895374_49895446_49895549_49895714_49895881_49895960_49896108_49896194_49896405_49896539_49896634_49896728_49896891_49897279_49897417_49897519_49897686_49898050_49898212_49898517_49898689_49898866_49898996_49899074_49899264_49902379
transcript_144581.known	chr3	-	4198	19	FSM	ENSG00000164078.14	ENST00000344206.8	4198	19	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_9	3.16617929972778	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCCCTCACTCCACAGAGT	-49903596	False	NA	NA	False	NA	NA	NA	49903609	49887164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49887563_49889923_49890061_49890484_49890651_49891196_49891307_49891398_49891581_49891757_49891839_49895166_49895374_49895446_49895549_49895714_49895881_49896194_49896405_49896539_49896634_49896728_49896891_49897279_49897417_49897519_49897686_49898050_49898212_49898517_49898689_49898866_49898996_49899074_49899264_49902379
transcript_144586.known	chr3	-	3708	6	FSM	ENSG00000164077.15	ENST00000645862.1	3708	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	28.9592817590492	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGAAACCCTGTCTCTAC	-49928908	False	633	NA	False	NA	NA	NA	49929541	49907159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49909155_49909252_49909401_49910118_49910885_49911525_49912012_49913219_49913360_49929368
transcript_144587.known	chr3	-	2370	6	FSM	ENSG00000164077.15	ENST00000296473.8	2025	6	-334	-11	28	11	multi-exon	FALSE	canonical	3	64	junction_5	4.40908153700972	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGTCACTTGTCCCTT	NA	False	NA	4	True	ATTAAA	-25	NA	49930145	49908861	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49909155_49909252_49909401_49910118_49910885_49911525_49912012_49913219_49913360_49929608
transcript_144588.known	chr3	-	1617	5	FSM	ENSG00000164077.15	ENST00000455683.7	1617	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	24.0572234474388	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACTTGTCAAGCTCTGTC	-49929256	False	NA	-7	True	ATTAAA	-14	NA	49929889	49908872	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_49909155_49909252_49909401_49910118_49910885_49913219_49913360_49929608
transcript_144590.nic	chr3	-	2914	4	NIC	ENSG00000164077.15	novel	2527	7	NA	NA	0	-1	intron_retention	FALSE	canonical	3	64	junction_3	5.43650214343336	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGACACTTGTCAAGCTCT	-49929254	True	NA	-10	True	ATTAAA	-11	NA	49929887	49908875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_49910885_49911525_49912012_49913219_49913360_49929608
transcript_144593.known	chr3	+	4010	21	FSM	ENSG00000004534.15	ENST00000443081.5	4010	21	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	221.07606722574	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCTTTTTGTTATTTTT	49928666	True	NA	9	True	AATAAA	-16	NA	49940040	50077248	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_49940226_49962575_49962686_49967197_49968749_49972058_49972149_49975322_49975393_49999439_49999514_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
transcript_144599.known	chr3	+	3630	21	FSM	ENSG00000004534.15	ENST00000266022.9	3630	21	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_2	204.975608304988	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTTTTTGTTATTTTTT	49928775	True	NA	10	True	AATAAA	-17	NA	49940149	50077249	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_49940226_49962575_49962686_49967469_49968749_49972058_49972149_49975322_49975393_49999439_49999514_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
transcript_144606.nic	chr3	+	3608	20	NIC	ENSG00000004534.15	novel	3630	21	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	116	junction_5	210.361303752243	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTATCTTTTTGTTATTTT	49928721	True	NA	8	True	AATAAA	-15	NA	49940095	50077247	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_49940226_49962575_49962686_49967469_49968749_49972058_49972149_49975322_49975393_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
transcript_144607.nic	chr3	+	2397	20	NIC	ENSG00000004534.15	novel	4010	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	221.750427457451	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTATCTTTTTGTTATTTT	49928727	True	NA	8	True	AATAAA	-15	NA	49940101	50077247	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_49940226_49962575_49962686_49972058_49972149_49975322_49975393_49999439_49999514_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
transcript_144609.known	chr3	+	2324	19	FSM	ENSG00000004534.15	ENST00000422955.5	2324	19	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	227.791686567214	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCTTTTTGTTATTTTT	49928727	True	NA	9	True	AATAAA	-16	NA	49940101	50077248	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_49940226_49962575_49962686_49972058_49972149_49975322_49975393_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
transcript_14461.known	chr1	-	3239	13	FSM	ENSG00000160714.10	ENST00000292211.5	3239	13	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_12	20.7020865829725	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTGGCTCTAATAAAATTA	-154556157	True	NA	-5	True	AATAAA	-13	NA	154558662	154548576	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154550470_154550937_154551005_154551396_154551493_154551770_154551820_154551920_154551980_154552092_154552184_154552403_154552465_154552735_154552821_154553031_154553173_154554734_154554786_154555427_154555533_154555859_154555965_154558226
transcript_144616.known	chr3	+	2260	17	FSM	ENSG00000004534.15	ENST00000442092.5	2260	17	0	0	0	0	multi-exon	TRUE	canonical	3	125	junction_2	196.273048009654	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTTTTTGTTATTTTTT	NA	False	NA	10	True	AATAAA	-17	NA	49940006	50077249	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_49940226_49962575_49962686_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
transcript_144619.known	chr3	+	2128	16	FSM	ENSG00000004534.15	ENST00000419610.5	2128	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	220.320614862371	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCTTTTTGTTATTTTT	49928688	True	NA	9	True	AATAAA	-16	NA	49940062	50077248	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_49940226_49962575_49962686_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
transcript_144622.nic	chr3	+	2779	15	ISM	ENSG00000004534.15	ENST00000266022.9	3630	21	-135	15225	8	852	5prime_fragment	FALSE	canonical	3	225	junction_2	100.228438059856	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCACCAGTCAAGGAAAGTC	NA	False	NA	-19	True	NA	NA	NA	49940014	50062024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_49940226_49962575_49962686_49967469_49968749_49972058_49972149_49975322_49975393_49999439_49999514_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961
transcript_144627.nic	chr3	+	2627	14	NIC	ENSG00000004534.15	novel	3630	21	NA	NA	-4	852	combination_of_known_junctions	FALSE	canonical	3	116	junction_5	112.896559451981	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCACCAGTCAAGGAAAGTC	49928718	True	NA	-19	True	NA	NA	NA	49940092	50062024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_49940226_49962575_49962686_49967469_49968749_49972058_49972149_49975322_49975393_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961
transcript_14463.known	chr1	+	5857	6	FSM	ENSG00000160716.6	ENST00000368476.4	5857	6	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_1	1.2	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTGACAGTCTGCC	154567767	False	NA	NA	False	AAGAAA	-3	NA	154567777	154580013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154568109_154569461_154569608_154569791_154569837_154570257_154570368_154571188_154572162_154575761
transcript_144651.known	chr3	+	581	2	FSM	ENSG00000004534.15	ENST00000493652.1	581	2	0	0	0	0	multi-exon	FALSE	canonical	3	451	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCGGAGCTTGCAGTGAGC	49928722	True	NA	NA	False	NA	NA	NA	49940096	49963027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_49940226_49962575
transcript_144657.known	chr3	+	3177	25	FSM	ENSG00000003756.17	ENST00000347869.8	3177	25	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_6	57.0430514806337	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCCTGGTGATGAAATCA	50085671	True	NA	74	True	NA	NA	NA	50088918	50119021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_50089030_50090381_50090452_50092042_50092209_50093719_50093876_50099981_50100052_50100531_50100606_50103082_50103167_50104247_50104309_50105076_50105143_50105548_50105710_50106766_50106865_50107481_50107570_50108069_50108148_50108231_50108305_50109602_50109689_50110378_50110464_50110678_50110771_50113382_50113545_50113949_50114100_50114179_50114252_50115427_50115608_50115905_50115981_50117073_50117172_50117249_50117380_50118330
transcript_14466.known	chr1	-	6753	16	FSM	ENSG00000160710.18	ENST00000681235.1	6753	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	293.04535864303	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTCACGCCATTCTCCTG	-154602648	True	NA	NA	False	NA	NA	NA	154608181	154581694	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154585044_154585216_154585345_154585752_154585866_154586180_154586364_154588124_154588259_154588550_154588674_154589368_154589463_154589756_154589929_154590261_154590410_154596804_154596996_154597122_154597268_154597827_154597977_154598401_154598586_154601040_154602249_154602384_154602627_154607991
transcript_144669.nic	chr3	+	3059	24	NIC	ENSG00000003756.17	novel	3177	25	NA	NA	-7	0	combination_of_known_junctions	TRUE	canonical	3	33	junction_7	69.5597552203413	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGGTGTCCTGTGTCTC	50085664	True	NA	10	True	AAGAAA	-10	NA	50088911	50118957	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_50089030_50090381_50090452_50092042_50092209_50093719_50093876_50099981_50100052_50100531_50100606_50103082_50103167_50105076_50105143_50105548_50105710_50106766_50106865_50107481_50107570_50108069_50108148_50108231_50108305_50109602_50109689_50110378_50110464_50110678_50110771_50113382_50113545_50113949_50114100_50114179_50114252_50115427_50115608_50115905_50115981_50117073_50117172_50117249_50117380_50118330
transcript_14467.known	chr1	-	6263	16	FSM	ENSG00000160710.18	ENST00000649042.1	6263	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	289.503636515253	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CATAAATAAAAAAAAAACAA	-154619727	True	NA	-42	True	AATATA	-8	NA	154627976	154582095	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154585044_154585216_154585345_154585752_154585866_154586180_154586364_154588124_154588259_154588550_154588674_154589368_154589463_154589756_154589929_154590183_154590410_154596804_154596996_154597122_154597268_154597827_154597977_154598401_154598586_154601040_154602249_154602384_154602627_154627953
transcript_144671.nic	chr3	+	3046	24	NIC	ENSG00000003756.17	novel	3177	25	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_5	67.9071143656869	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGGTGTCCTGTGTCTC	50085664	True	NA	10	True	AAGAAA	-10	NA	50088911	50118957	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_50089030_50090381_50090452_50092042_50092209_50093719_50093876_50099981_50100052_50103082_50103167_50104247_50104309_50105076_50105143_50105548_50105710_50106766_50106865_50107481_50107570_50108069_50108148_50108231_50108305_50109602_50109689_50110378_50110464_50110678_50110771_50113382_50113545_50113949_50114100_50114179_50114252_50115427_50115608_50115905_50115981_50117073_50117172_50117249_50117380_50118330
transcript_14468.known	chr1	-	6610	15	FSM	ENSG00000160710.18	ENST00000368474.9	6610	15	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_14	174.259190019128	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTAAGTCCTGGTTTCTT	-154602653	True	NA	-3	True	AATAAA	-30	NA	154608186	154582056	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154585044_154585216_154585345_154585752_154585866_154586180_154586364_154588124_154588259_154588550_154588674_154589368_154589463_154589756_154589929_154590183_154590410_154596804_154596996_154597122_154597268_154597827_154597977_154598401_154598586_154601040_154602627_154607991
transcript_144682.nic	chr3	+	2985	23	NIC	ENSG00000003756.17	novel	3177	25	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_6	79.4509048469036	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGGTGTCCTGTGTCTC	50085664	True	NA	10	True	AAGAAA	-10	NA	50088911	50118957	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_50089030_50090381_50090452_50092042_50092209_50093719_50093876_50099981_50100052_50103082_50103167_50105076_50105143_50105548_50105710_50106766_50106865_50107481_50107570_50108069_50108148_50108231_50108305_50109602_50109689_50110378_50110464_50110678_50110771_50113382_50113545_50113949_50114100_50114179_50114252_50115427_50115608_50115905_50115981_50117073_50117172_50117249_50117380_50118330
transcript_14469.known	chr1	-	6519	15	FSM	ENSG00000160710.18	ENST00000368471.8	6519	15	0	0	0	0	multi-exon	FALSE	canonical	3	471	junction_14	134.290444445566	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAGAAAGTTTTAAGTC	-154619719	True	NA	-13	True	AATAAA	-20	NA	154627968	154582066	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154585044_154585216_154585345_154585752_154585866_154586180_154586364_154588124_154588259_154588550_154588674_154589368_154589463_154589756_154589929_154590183_154590410_154596804_154596996_154597122_154597268_154597827_154597977_154598401_154598586_154601040_154602627_154627854
transcript_144698.known	chr3	+	2716	5	FSM	ENSG00000003756.17	ENST00000469838.5	2716	5	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_4	16.3171688720807	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCTCCTGTTAAATGAAG	50085671	True	NA	NA	False	AAAAAG	-5	NA	50088918	50102194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_50089030_50090381_50090452_50092042_50092209_50093719_50093876_50099981
transcript_14470.known	chr1	-	6425	15	FSM	ENSG00000160710.18	ENST00000649724.1	6425	15	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_14	226.398071402329	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATACATTCCTCATAAATAA	NA	False	NA	42	True	NA	NA	NA	154628013	154582106	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154585044_154585216_154585345_154585752_154585866_154586180_154586364_154588124_154588259_154588550_154588674_154589368_154589463_154589756_154589929_154590183_154590410_154596804_154596996_154597122_154597268_154597827_154597977_154598401_154598586_154601040_154602627_154627953
transcript_144703.known	chr3	+	2953	16	FSM	ENSG00000188338.15	ENST00000614032.5	2953	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	1.72046505340853	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTTAGTAGTCCCTGTG	50205166	True	NA	NA	False	AATAAA	-1	NA	50205270	50221486	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_50205349_50214148_50214301_50214401_50214484_50214652_50214769_50215385_50215460_50215543_50215637_50215739_50215822_50217237_50217321_50217414_50217474_50217675_50217841_50217916_50217997_50218269_50218371_50218592_50218718_50218803_50218949_50219880_50219985_50220072
transcript_144705.known	chr3	+	2219	9	FSM	ENSG00000114353.17	ENST00000313601.11	2219	9	0	0	0	0	multi-exon	FALSE	canonical	3	1078	junction_1	62.4558594128685	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATGGGTATTCTCTCCCA	50219063	True	NA	15	True	AATAAA	-28	NA	50236203	50259362	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_50236454_50252099_50252143_50252396_50252539_50253023_50253185_50256191_50256321_50256722_50256853_50256936_50257091_50257499_50257715_50258367
transcript_144708.known	chr3	+	2925	18	FSM	ENSG00000012171.20	ENST00000618865.4	2925	18	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_10	6.62228595579176	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTGGAATGGCCCCAGC	50267550	True	NA	1	True	AATAAA	-14	NA	50267607	50277139	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_50267770_50269160_50269350_50270126_50270285_50270432_50270496_50270889_50271010_50271087_50271182_50271360_50271481_50273297_50273444_50273534_50273647_50273758_50273829_50273912_50274058_50274362_50274583_50274842_50274935_50275011_50275054_50275301_50275460_50275559_50275616_50275704_50275845_50276301
transcript_14471.known	chr1	-	6343	15	FSM	ENSG00000160710.18	ENST00000529168.2	6343	15	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_8	235.993481836655	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTGACTCCAAGAGCAGA	-154602637	True	NA	54	True	NA	NA	NA	154608170	154582229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154585044_154585216_154585345_154585752_154585866_154586180_154586364_154588124_154588259_154588550_154588674_154589368_154589463_154589756_154589929_154590261_154590410_154596804_154596996_154597122_154597268_154597827_154597977_154598401_154598586_154601040_154602627_154607991
transcript_144713.known	chr3	+	3184	17	FSM	ENSG00000012171.20	ENST00000616701.5	3184	17	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_9	6.48284997127035	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	50269121	True	NA	NA	False	NA	NA	NA	50269146	50277546	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_50269350_50270126_50270285_50270432_50270496_50270889_50271010_50271087_50271182_50271360_50271481_50273297_50273444_50273534_50273647_50273758_50273829_50273912_50274058_50274362_50274583_50274842_50274935_50275011_50275054_50275301_50275460_50275559_50275616_50275704_50275845_50276301
transcript_144714.known	chr3	+	2755	17	FSM	ENSG00000012171.20	ENST00000433753.4	2755	17	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_9	6.12850664925804	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGAATGGCCCCAGCAGA	50269143	True	NA	4	True	AATAAA	-17	NA	50269168	50277142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_50269350_50270126_50270285_50270432_50270496_50270889_50271010_50271087_50271182_50271360_50271481_50273297_50273444_50273534_50273647_50273758_50273829_50273915_50274058_50274362_50274583_50274842_50274935_50275011_50275054_50275301_50275460_50275559_50275616_50275704_50275845_50276301
transcript_144719.nic	chr3	+	1134	3	ISM	ENSG00000012171.20	ENST00000416295.1	1088	5	852	-721	852	0	3prime_fragment	FALSE	canonical	3	27	junction_1	0.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGTCCTCGGCCTTGCT	50275321	True	NA	27	True	AATAAA	-40	NA	50275485	50277165	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_50275616_50275704_50275845_50276301
transcript_144722.known	chr3	+	2221	11	FSM	ENSG00000012171.20	ENST00000456560.6	2221	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	7.14212853426764	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGTCCTCGGCCTTGCT	50273093	False	NA	27	True	AATAAA	-40	NA	50273118	50277165	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_50273444_50273534_50273647_50273758_50273829_50273915_50274058_50274362_50274583_50274842_50274935_50275011_50275054_50275301_50275460_50275559_50275616_50275704_50275845_50276301
transcript_144725.known	chr3	-	1943	12	FSM	ENSG00000214706.12	ENST00000417626.8	1943	12	0	0	0	0	multi-exon	FALSE	canonical	3	736	junction_1	33.6599425955718	1960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGGGTATTTTTCTGTT	-50286849	True	NA	-1	True	ATTAAA	-29	NA	50292429	50287731	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50288272_50288408_50288505_50288582_50288712_50288799_50288938_50289254_50289361_50289446_50289629_50289711_50289763_50289928_50290087_50290169_50290295_50290387_50290473_50290559_50290680_50292216
transcript_144743.nic	chr3	-	2233	11	NIC	ENSG00000214706.12	novel	2275	15	NA	NA	-157	0	intron_retention	FALSE	canonical	3	753	junction_10	30.5980391528608	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCTTAACCCCTGGGT	-50291496	False	NA	-12	True	ATTAAA	-18	NA	50292593	50287742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_50288505_50288582_50288712_50288799_50288938_50289254_50289361_50289446_50289629_50289711_50289763_50289928_50290087_50290169_50290295_50290387_50290473_50290559_50290680_50292216
transcript_144842.known	chr3	-	1696	4	FSM	ENSG00000186792.17	ENST00000621157.5	1696	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	15.3260852434302	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGGTTTGGCTGTTGCT	-50298733	False	NA	-4	True	CATAAA	-18	NA	50298831	50292831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50293516_50293631_50293722_50294708_50295620_50298820
transcript_144843.known	chr3	-	1878	4	FSM	ENSG00000186792.17	ENST00000336307.6	1878	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	8.65383665716478	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGGTTTGGCTGTTGCT	-50298308	True	NA	-4	True	CATAAA	-18	NA	50299405	50292831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50293516_50293631_50293722_50294708_50295620_50299212
transcript_144846.known	chr3	-	583	3	FSM	ENSG00000243477.6	ENST00000452674.1	583	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGCTGACTCTGGATCCT	-50298791	False	NA	NA	False	NA	NA	NA	50298889	50297435	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50297673_50297806_50298084_50298820
transcript_144848.known	chr3	-	891	2	FSM	ENSG00000214706.12	ENST00000462001.1	891	2	0	0	0	0	multi-exon	FALSE	canonical	3	753	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGCTGTTTCACAGCCTG	-50286856	True	NA	NA	False	NA	NA	NA	50292436	50290008	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50290680_50292216
transcript_144849.known	chr3	-	1330	2	FSM	ENSG00000243477.6	ENST00000354862.4	1330	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTGACAGTTTATTTG	-50298319	True	NA	-4	True	AATAAA	-15	NA	50299416	50296401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50297528_50299212
transcript_144850.known	chr3	-	1464	2	FSM	ENSG00000243477.6	ENST00000443094.3	1464	2	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTGACAGTTTATTTG	-50298308	True	NA	-4	True	AATAAA	-15	NA	50299405	50296401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50297673_50299212
transcript_144851.known	chr3	-	2031	4	FSM	ENSG00000114378.17	ENST00000395144.7	2031	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2.05480466765633	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGCTGTTTACTGAGCGC	-50303476	True	NA	-22	True	AATAAA	-15	NA	50303574	50299892	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50300801_50300987_50301078_50302056_50302981_50303465
transcript_144852.known	chr3	-	2517	3	FSM	ENSG00000114378.17	ENST00000266031.8	2517	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTTTACTGAGCGCCTA	-50303474	True	NA	-19	True	AATAAA	-18	NA	50303572	50299889	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50300801_50300987_50301078_50302056
transcript_144854.known	chr3	-	2318	5	FSM	ENSG00000068001.14	ENST00000442581.1	2318	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_4	266.863612169213	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCTCTGCTTGGATTTT	-50311749	False	11028	-28	True	ATTAAA	-12	NA	50322777	50317811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50318540_50318955_50319046_50319568_50320536_50321365_50321774_50322652
transcript_144857.nic	chr3	-	3452	4	NIC	ENSG00000068001.14	novel	2136	4	NA	NA	196	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_3	308.920701799022	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGCTTGGATTTTGTA	-50311517	False	NA	-25	True	ATTAAA	-15	NA	50322545	50317808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_50318540_50318955_50319046_50319568_50320536_50320881
transcript_144858.known	chr3	-	1882	4	FSM	ENSG00000068001.14	ENST00000357750.9	1882	4	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_3	261.892259441847	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCTTGGATTTTGTAC	-50311717	False	11028	-24	True	ATTAAA	-16	NA	50322745	50317807	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50318540_50318955_50319046_50319568_50320536_50322652
transcript_144859.known	chr3	-	790	4	FSM	ENSG00000114383.10	ENST00000421918.1	790	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	367.212018684937	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTGGCCCATAACCTTC	-50317223	True	NA	-47	True	AATAAA	-2	NA	50328251	50326007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50326187_50326356_50326478_50327027_50327220_50327953
transcript_144861.known	chr3	-	735	4	FSM	ENSG00000114383.10	ENST00000454201.5	735	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	368.040154814058	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTGGCCCATAACCTTC	-50317178	True	NA	-47	True	AATAAA	-2	NA	50328206	50326007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50326187_50326356_50326478_50327037_50327220_50327953
transcript_144864.known	chr3	-	1513	3	FSM	ENSG00000068001.14	ENST00000481597.5	1513	3	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_2	289	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGAGGCAGCTGACCCT	-50311713	False	11028	NA	False	NA	NA	NA	50322741	50318588	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50319046_50319568_50320536_50322652
transcript_144865.known	chr3	-	1669	3	FSM	ENSG00000114383.10	ENST00000232496.5	1669	3	0	0	0	0	multi-exon	FALSE	canonical	3	797	junction_2	12	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGAGTGGCATCCTGTG	-50317195	True	NA	-4	True	AATAAA	-20	NA	50328223	50324908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50326187_50326356_50326478_50327953
transcript_144868.known	chr3	-	475	3	FSM	ENSG00000114383.10	ENST00000463304.1	475	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	398.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCCGGCAAGAAACTCCCA	-50317210	True	NA	-129	True	NA	NA	NA	50328238	50326089	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50326187_50326384_50326478_50327953
transcript_144873.known	chr3	-	1847	6	FSM	ENSG00000068028.18	ENST00000359365.9	1847	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	52.1359760626	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTGTTGGAATCTTTT	-50339036	False	NA	-12	True	AATAAA	-14	NA	50340836	50329787	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50330728_50331333_50331450_50331558_50331857_50332049_50332155_50337904_50338012_50340555
transcript_144874.known	chr3	-	1864	6	FSM	ENSG00000068028.18	ENST00000357043.6	1864	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	54.3271571131787	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTGTTGGAATCTTTT	-50339041	False	NA	-12	True	AATAAA	-14	NA	50340841	50329787	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50330728_50331333_50331450_50331558_50331857_50332049_50332155_50337904_50338024_50340555
transcript_144876.known	chr3	-	1757	5	FSM	ENSG00000068028.18	ENST00000327761.7	1757	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	15.039531242695	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGGAATCTTTTATACAT	-50336265	True	NA	-6	True	AATAAA	-20	NA	50337464	50329781	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50330728_50331333_50331450_50331558_50331857_50332049_50332155_50337172
transcript_144877.known	chr3	-	1745	5	FSM	ENSG00000068028.18	ENST00000395117.6	1745	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	49.2512690191837	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTGTTGGAATCTTTT	-50339041	False	NA	-12	True	AATAAA	-14	NA	50340841	50329787	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50330728_50331333_50331450_50331558_50331857_50332049_50332155_50340555
transcript_144879.known	chr3	+	790	1	FSM	ENSG00000281358.1	ENST00000629828.1	790	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTCTTGCTTTTGTCAC	50337500	False	NA	NA	False	ATTAAA	-18	NA	50337510	50338300	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_50337500_50338300
transcript_144880.known	chr3	-	1542	11	FSM	ENSG00000114388.14	ENST00000232501.8	1542	11	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_8	20.8863591848843	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTCCTGATGCGGTGACTC	-50348001	False	2774	NA	False	AATAAA	-44	NA	50350775	50347329	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50347674_50347758_50347902_50348123_50348242_50348316_50348411_50348526_50348564_50348684_50348783_50348873_50349011_50349385_50349495_50349664_50349834_50349930_50350023_50350574
transcript_144882.known	chr3	-	1371	11	FSM	ENSG00000114388.14	ENST00000667046.1	1371	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	87.7049599509629	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTCTGTAAATAAAGACAT	-50348052	False	NA	-35	True	NA	NA	NA	50350826	50347521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50347674_50347758_50347902_50348123_50348242_50348316_50348411_50348526_50348564_50348710_50348783_50348873_50349011_50349385_50349491_50349664_50349834_50349930_50350023_50350574
transcript_144888.known	chr3	-	1573	10	FSM	ENSG00000114388.14	ENST00000433381.5	1573	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	86.8126974839766	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTAAATAAAGACATCCAT	-50348007	False	2774	-31	True	NA	NA	NA	50350781	50347517	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50347674_50347758_50348242_50348316_50348411_50348526_50348564_50348684_50348783_50348873_50349011_50349385_50349491_50349664_50349829_50349930_50350023_50350574
transcript_144902.known	chr3	-	1905	10	FSM	ENSG00000114388.14	ENST00000479512.5	1905	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	92.2088343696116	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAAACAGCCTTTATTGA	-50347992	False	2774	-12	True	AATAAA	-9	NA	50350766	50347498	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50347674_50347758_50347902_50348123_50348242_50348316_50348411_50348526_50348564_50348684_50348783_50348873_50349011_50349385_50349491_50349664_50349829_50349932
transcript_144903.known	chr3	-	5304	38	FSM	ENSG00000007402.12	ENST00000429770.5	5304	38	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	8.35576722227827	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGTTCCCATCCACTGT	-50503406	False	NA	-3	True	ATTAAA	-22	NA	50503428	50362801	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50364807_50364887_50364971_50365074_50365185_50365355_50365483_50365632_50365689_50365809_50365863_50366010_50366164_50366266_50366339_50366577_50366629_50366830_50366920_50367010_50367110_50367393_50367498_50367641_50367705_50367811_50367903_50368137_50368236_50370319_50370381_50374736_50374814_50375643_50375706_50375808_50375881_50375962_50376035_50376113_50376189_50377466_50377542_50377731_50377804_50378007_50378098_50378283_50378334_50378914_50378994_50379091_50379200_50379431_50379591_50379724_50379825_50379967_50380019_50380747_50380806_50380994_50381127_50384195_50384338_50387567_50387613_50394108_50394169_50434312_50434430_50476117_50476200_50503217
transcript_144907.known	chr3	-	5476	38	FSM	ENSG00000007402.12	ENST00000266039.7	5476	38	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	9.55908923474452	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGTTCCCATCCACTGT	-50503575	False	NA	-3	True	ATTAAA	-22	NA	50503597	50362801	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50364807_50364887_50364977_50365074_50365185_50365355_50365483_50365632_50365689_50365809_50365863_50366010_50366164_50366266_50366339_50366577_50366626_50366830_50366920_50367010_50367110_50367393_50367498_50367641_50367705_50367811_50367903_50368137_50368236_50370319_50370381_50374736_50374814_50375643_50375706_50375808_50375881_50375962_50376035_50376113_50376189_50377466_50377542_50377731_50377804_50378007_50378098_50378283_50378334_50378914_50378994_50379091_50379200_50379431_50379591_50379724_50379825_50379967_50380019_50380747_50380806_50380994_50381127_50384195_50384338_50387567_50387613_50394108_50394169_50434312_50434430_50476117_50476200_50503217
transcript_144910.known	chr3	-	1030	4	FSM	ENSG00000007402.12	ENST00000487413.1	1030	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	20.4015249974658	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTCCCATTCATTCATTG	-50503334	True	NA	NA	False	NA	NA	NA	50503634	50415802	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50416217_50434312_50434430_50476117_50476200_50503217
transcript_144911.nnic	chr3	-	2007	4	NNC	ENSG00000007402.12	novel	1030	4	NA	NA	-72	882	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	23.0988215187606	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTGAGTGAGTGATCAC	NA	False	NA	-8	True	AATAAA	-10	NA	50503706	50414920	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_50416240_50434312_50434430_50476117_50476200_50503217
transcript_144913.known	chr3	+	1212	4	FSM	ENSG00000114395.11	ENST00000424512.5	1212	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	61.2771481784922	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATTTGTAAAAAATGA	50350080	True	NA	-5	True	AAAAAG	-2	NA	50350844	50354052	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_50350989_50351342_50351561_50352008_50352047_50353240
transcript_144914.known	chr3	+	1142	4	FSM	ENSG00000114395.11	ENST00000425346.6	1142	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	61.2771481784922	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTGAAAAGATTGATGGG	50350097	True	NA	12	True	AGTAAA	-15	NA	50350861	50354069	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_50350985_50351408_50351561_50352008_50352047_50353240
transcript_144917.known	chr3	+	910	3	FSM	ENSG00000271858.5	ENST00000606665.5	910	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTTGTCTGAGGCATTC	50365261	False	NA	8	True	AATAAA	-18	NA	50365384	50368197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_50365858_50366296_50366332_50367795
transcript_144918.known	chr3	+	1004	3	FSM	ENSG00000271858.5	ENST00000607121.5	1004	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTTGTCTGAGGCATTC	50365250	True	NA	8	True	AATAAA	-18	NA	50365373	50368197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_50365941_50366296_50366332_50367795
transcript_144919.known	chr3	+	841	2	FSM	ENSG00000114395.11	ENST00000419046.1	841	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAAAGAGCAGCTTGGCAA	50350108	True	NA	NA	False	NA	NA	NA	50350872	50353393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_50351561_50353240
transcript_144920.known	chr3	+	511	2	FSM	ENSG00000271858.5	ENST00000607088.5	511	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTTGTCTGAGGCATTC	50366197	False	NA	8	True	AATAAA	-18	NA	50366222	50368197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_50366332_50367795
transcript_144921.known	chr3	-	2107	2	FSM	ENSG00000126062.4	ENST00000266025.4	2107	2	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	0	242	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGGGCTCTTGTCAGGC	-50356747	True	NA	-21	True	AATAAA	-20	NA	50359521	50354749	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50355548_50358212
transcript_144922.known	chr3	+	1533	3	FSM	ENSG00000114395.11	ENST00000418577.1	1533	3	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	6.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTAGGAGAGAAAAAAGT	50350093	True	NA	-25	True	NA	NA	NA	50350857	50354032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_50351561_50352008_50352047_50353240
transcript_144929.known	chr3	+	1499	11	FSM	ENSG00000114735.10	ENST00000455834.5	1499	11	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	18.2964477426631	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGGTGACCTAATGTTT	50568970	True	NA	NA	False	AGTAAA	-16	NA	50569492	50580672	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_50569546_50570930_50571333_50571709_50571802_50572114_50572209_50577051_50577187_50577508_50577574_50577825_50577876_50578820_50578927_50579843_50579940_50580115_50580230_50580380
transcript_144933.known	chr3	+	16993	11	FSM	ENSG00000114735.10	ENST00000232854.9	16993	11	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	13.2079521501253	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGTGCATTCCCATTTT	50568999	True	NA	NA	False	AATAAA	-13	NA	50569521	50596166	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_50569575_50570930_50571333_50571709_50571802_50572114_50572209_50577051_50577187_50577508_50577574_50577825_50577876_50578820_50578927_50579843_50579940_50580115_50580230_50580380
transcript_144947.known	chr3	-	2657	6	FSM	ENSG00000088543.15	ENST00000357203.8	2657	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	17.5544866059934	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGTGAGCCTGTGACG	-50566593	True	NA	1	True	ATTAAA	-26	NA	50567747	50558024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50559738_50560916_50561065_50561721_50561748_50565465_50565862_50566005_50566095_50567462
transcript_144949.nic	chr3	-	2437	5	NIC	ENSG00000088543.15	novel	2365	5	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_4	21.3585462988472	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGAGAGTGTGTGAGCC	-50566630	True	NA	-6	True	ATTAAA	-19	NA	50567784	50558031	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_50559738_50560916_50561065_50561721_50561748_50565465_50565701_50567462
transcript_144950.known	chr3	-	2486	5	FSM	ENSG00000088543.15	ENST00000426034.5	2486	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	15.0665191733194	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGTGAGCCTGTGACG	-50566511	True	NA	1	True	ATTAAA	-26	NA	50567665	50558024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50559738_50560916_50561065_50561721_50561748_50565465_50565862_50567462
transcript_144952.known	chr3	-	1490	5	FSM	ENSG00000088543.15	ENST00000441239.5	1490	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	24.802973612049	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCATCAGGGTAGGCTATC	-50566522	True	NA	NA	False	NA	NA	NA	50567676	50558810	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50559738_50560916_50561065_50561721_50561748_50565525_50565701_50567462
transcript_144953.nic	chr3	-	2546	5	NIC	ENSG00000088543.15	novel	2365	5	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_3	21.0475651798492	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGAGAGTGTGTGAGCC	-50567779	False	NA	-6	True	ATTAAA	-19	NA	50567792	50558031	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_50559738_50560916_50561065_50561721_50561748_50565525_50565862_50567462
transcript_144954.known	chr3	-	565	5	FSM	ENSG00000088543.15	ENST00000484982.1	565	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	21.6376408140999	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACTCCCTGATTGTCAAG	-50567612	False	NA	NA	False	NA	NA	NA	50567625	50559598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50559738_50560916_50561065_50561721_50561748_50566005_50566095_50567462
transcript_144956.known	chr3	-	788	4	FSM	ENSG00000088543.15	ENST00000486175.5	788	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	16.739839372653	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGGAGGTTTCCCTCTGTT	-50567608	False	NA	NA	False	NA	NA	NA	50567621	50559282	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_50559738_50560916_50561065_50561721_50561748_50567462
transcript_144963.known	chr3	+	2500	11	FSM	ENSG00000114738.11	ENST00000357955.6	2500	11	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	42.8154177837844	535	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTGGCTCCTGGGTTT	50610944	True	NA	13	True	AATAAA	-16	NA	50617169	50649288	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_50617227_50617513_50617785_50640365_50640506_50641706_50641772_50642252_50642333_50644408_50644533_50645709_50645786_50646139_50646265_50646739_50646826_50647122_50647204_50647893
transcript_144983.nnic	chr3	+	1200	8	NNC	ENSG00000088538.13	novel	9069	53	NA	NA	-17	-302727	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_7	15.3383606073938	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCAGCCACTTACAGTAT	50672501	True	NA	NA	False	AATAAA	-22	NA	50674909	51081471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_50675301_50778674_50778759_50841674_50841716_50890025_50890082_50933980_50934078_51064447_51064597_51075355_51075441_51081174
transcript_144988.known	chr3	+	909	4	FSM	ENSG00000145050.19	ENST00000528157.7	909	4	0	0	0	0	multi-exon	FALSE	canonical	3	748	junction_1	40.3016404408335	213	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTTCTGCTTTCCAGTT	51376003	True	NA	70	True	NA	NA	NA	51385290	51389397	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51385437_51386207_51386336_51387736_51387879_51388904
transcript_14499.nic	chr1	-	2596	2	ISM	ENSG00000160710.18	ENST00000368471.8	6519	15	-9	18087	-1	23	5prime_fragment	FALSE	canonical	3	471	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTGATCTCCATGCAT	-154619728	True	NA	NA	False	AAAAAG	-17	NA	154627977	154600153	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_154602627_154627854
transcript_144995.known	chr3	-	5946	25	FSM	ENSG00000145041.16	ENST00000423656.5	5946	25	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	59.8894670529709	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTGCTGTTTTGTTA	-51494567	True	NA	0	True	AATAAA	-20	NA	51499994	51395866	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_51397125_51398734_51398828_51403142_51403396_51412378_51412481_51412992_51413067_51413281_51413387_51413949_51414044_51414623_51414858_51416786_51416872_51418115_51418199_51418677_51418877_51419733_51420998_51422306_51422432_51427371_51427542_51429260_51429471_51430032_51430213_51433105_51433265_51440969_51441072_51441384_51441898_51443765_51443904_51463113_51463228_51466802_51466877_51470928_51471006_51483718_51483837_51499872
transcript_144997.known	chr3	-	5649	25	FSM	ENSG00000145041.16	ENST00000684031.1	5649	25	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_23	54.5096831357104	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCCTTTCCCTATTTTC	-51494588	True	NA	-5	True	AATAAA	-20	NA	51500015	51397841	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_51398828_51403142_51403396_51412378_51412481_51412992_51413067_51413281_51413387_51413949_51414044_51414623_51414858_51416786_51416872_51418115_51418199_51418677_51418877_51419733_51420998_51422306_51422432_51427371_51427542_51429260_51429471_51430032_51430213_51433105_51433265_51440969_51441072_51441384_51441898_51443765_51443904_51463113_51463228_51466802_51466877_51470928_51471006_51483718_51483837_51496733_51496781_51499872
transcript_144999.nic	chr3	-	5665	24	ISM	ENSG00000145041.16	ENST00000423656.5	5946	25	-84	1975	-63	0	5prime_fragment	FALSE	canonical	3	81	junction_23	52.2314899693991	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCCTTTCCCTATTTTC	-51494651	True	NA	-5	True	AATAAA	-20	NA	51500078	51397841	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_51398828_51403142_51403396_51412378_51412481_51412992_51413067_51413281_51413387_51413949_51414044_51414623_51414858_51416786_51416872_51418115_51418199_51418677_51418877_51419733_51420998_51422306_51422432_51427371_51427542_51429260_51429471_51430032_51430213_51433105_51433265_51440969_51441072_51441384_51441898_51443765_51443904_51463113_51463228_51466802_51466877_51470928_51471006_51483718_51483837_51499872
transcript_145.known	SIRV5	+	1984	18	FSM	SIRV5A	SIRV502	1984	18	0	0	0	0	multi-exon	FALSE	canonical	3	824	junction_4	3929.46167897146	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTTTACCGCCAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	1019	10989	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2489_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858
transcript_14500.nic	chr1	-	2752	2	ISM	ENSG00000160710.18	ENST00000529168.2	6343	15	-418	18242	209	-268	5prime_fragment	FALSE	canonical	3	264	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGGTCTTGGGGGCCGG	-154608575	False	NA	NA	False	AAAAAG	-8	NA	154608588	154600471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_154602627_154607991
transcript_145006.known	chr3	-	5951	25	FSM	ENSG00000145041.16	ENST00000504652.5	5951	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	66.8103529693482	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTGCTGTTTTGTTA	-51494575	True	NA	0	True	AATAAA	-20	NA	51500002	51395866	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_51397125_51398734_51398828_51403142_51403396_51412378_51412481_51412992_51413067_51413281_51413387_51413949_51414044_51414623_51414858_51416786_51416872_51418115_51418199_51418677_51418877_51419733_51420998_51422306_51422432_51427371_51427542_51429260_51429471_51430032_51430213_51433105_51433265_51440969_51441072_51441384_51441898_51443765_51443904_51463113_51463228_51466805_51466877_51470928_51471006_51483718_51483837_51499872
transcript_145007.known	chr3	+	6624	1	FSM	ENSG00000259956.2	ENST00000563281.2	6624	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTTTGATTTGTAATTTC	51384274	True	NA	18	True	AATAAA	-23	NA	51391284	51397908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51391300_51397900
transcript_145018.nnic	chr3	+	5093	24	NNC	ENSG00000164080.14	novel	9957	23	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	13.9123641138483	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	51533389	True	NA	NA	False	NA	NA	NA	51538698	51663594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_51538916_51541497_51541651_51572824_51572916_51590366_51590560_51627552_51627755_51629333_51629474_51630271_51630389_51630704_51630932_51633576_51633760_51633901_51634036_51635592_51635790_51637160_51637504_51638143_51638322_51639418_51639671_51639880_51640000_51641748_51641868_51643874_51643975_51645023_51645230_51645590_51645764_51646284_51646482_51655970_51656171_51657579_51657670_51660025_51660119_51662425
transcript_14502.nic	chr1	-	2278	2	ISM	ENSG00000160710.18	ENST00000368471.8	6519	15	-9	18405	-1	-268	5prime_fragment	FALSE	canonical	3	471	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGGTCTTGGGGGCCGG	-154619728	True	NA	NA	False	AAAAAG	-8	NA	154627977	154600471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_154602627_154627854
transcript_145023.known	chr3	+	9957	23	FSM	ENSG00000164080.14	ENST00000684192.1	9957	23	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	10.8739015784212	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGCAGTGTTGTTTGATC	51533409	True	NA	12	True	AATAAA	-13	NA	51538718	51668660	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51538916_51541588_51541651_51590366_51590560_51627552_51627755_51629333_51629474_51630271_51630389_51630704_51630932_51633576_51633760_51633901_51634036_51635592_51635790_51637160_51637504_51638143_51638322_51639418_51639671_51639880_51640000_51641748_51641868_51643874_51643975_51645023_51645230_51645590_51645764_51646284_51646482_51655970_51656171_51657579_51657670_51660025_51660119_51662425
transcript_145024.nnic	chr3	+	5002	23	NNC	ENSG00000164080.14	novel	9957	23	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	11.5419643973095	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	51533389	True	NA	NA	False	NA	NA	NA	51538698	51663594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_51538916_51541497_51541651_51590366_51590560_51627552_51627755_51629333_51629474_51630271_51630389_51630704_51630932_51633576_51633760_51633901_51634036_51635592_51635790_51637160_51637504_51638143_51638322_51639418_51639671_51639880_51640000_51641748_51641868_51643874_51643975_51645023_51645230_51645590_51645764_51646284_51646482_51655970_51656171_51657579_51657670_51660025_51660119_51662425
transcript_145026.nnic	chr3	+	5047	22	NIC	ENSG00000164080.14	novel	9957	23	NA	NA	-218	0	combination_of_known_splicesites	TRUE	canonical	3	19	junction_1	8.68652878386558	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	51538487	True	NA	NA	False	NA	NA	NA	51538500	51663594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_51538916_51590366_51590560_51627552_51627755_51629333_51629474_51630271_51630389_51630704_51630932_51633576_51633760_51633901_51634036_51635592_51635790_51637160_51637504_51638143_51638322_51639418_51639671_51639880_51640000_51641748_51641868_51643874_51643975_51645023_51645230_51645590_51645764_51646284_51646482_51655970_51656171_51657579_51657670_51660025_51660119_51662425
transcript_145031.nnic	chr3	+	4663	21	NIC	ENSG00000164080.14	novel	9957	23	NA	NA	-27	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	11.6043095443029	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	51533382	True	NA	NA	False	NA	NA	NA	51538691	51663594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_51538916_51627552_51627755_51629333_51629474_51630271_51630389_51630704_51630932_51633576_51633760_51633901_51634036_51635592_51635790_51637160_51637504_51638143_51638322_51639418_51639671_51639880_51640000_51641748_51641868_51643874_51643975_51645023_51645230_51645590_51645764_51646284_51646482_51655970_51656171_51657579_51657670_51660025_51660119_51662425
transcript_14504.known	chr1	+	1224	2	FSM	ENSG00000287064.1	ENST00000653192.1	1224	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGTGTGTCCGGAGCCTCC	154671284	True	NA	NA	False	NA	NA	NA	154671592	154678345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154672085_154677613
transcript_145040.known	chr3	+	1488	6	FSM	ENSG00000164081.13	ENST00000611400.4	1488	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	73.6059780180931	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGGTTGTGTATTTGTT	51669453	True	NA	10	True	AATAAA	-27	NA	51671174	51704322	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51671289_51672209_51672302_51674270_51674563_51684412_51684635_51699405_51699575_51703723
transcript_145042.known	chr3	+	1320	5	FSM	ENSG00000164081.13	ENST00000341333.10	1320	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	46.3815696155272	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTGTGTATTTGTTT	51669530	True	NA	11	True	AATAAA	-28	NA	51671251	51704323	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51671289_51674270_51674563_51684412_51684635_51699405_51699575_51703723
transcript_145043.known	chr3	+	2290	5	FSM	ENSG00000164081.13	ENST00000415259.5	2290	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	64.8628360465375	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCCAGAATAAAGCCAATG	51669533	True	NA	-29	True	NA	NA	NA	51671254	51704283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51672302_51674270_51674563_51684412_51684635_51699405_51699575_51703723
transcript_145045.known	chr3	+	1174	4	FSM	ENSG00000164081.13	ENST00000614067.4	1174	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	69.6770327216142	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGGTTGTGTATTTGTT	51669453	True	NA	10	True	AATAAA	-27	NA	51671174	51704322	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51671289_51674270_51674563_51699405_51699575_51703723
transcript_145046.known	chr3	+	800	4	FSM	ENSG00000164081.13	ENST00000489026.5	800	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	69.0619689522067	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCCTGCACCCTCCTGC	51669453	True	NA	NA	False	NA	NA	NA	51671174	51704018	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51671289_51684412_51684635_51699405_51699575_51703723
transcript_145048.known	chr3	+	3356	6	FSM	ENSG00000164082.15	ENST00000395052.8	3356	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	11.7915223783869	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCTTTGCCTTTGACCC	51706860	True	NA	48	True	AATAAA	-20	NA	51707067	51718613	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51707168_51708847_51709434_51712472_51713311_51715061_51716138_51717636_51717818_51718038
transcript_145049.nnic	chr3	+	2259	5	NNC	ENSG00000164082.15	novel	3356	6	NA	NA	-35	0	intron_retention	FALSE	canonical	2	6	junction_1	10.8050913924872	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCTTTGCCTTTGACCC	51706825	True	NA	48	True	AATAAA	-20	NA	51707032	51718613	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_51707168_51713018_51713311_51715061_51716138_51717636_51717818_51718038
transcript_14505.known	chr1	-	13057	9	FSM	ENSG00000143603.19	ENST00000618040.4	13057	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	5.7662812973354	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACCAAAAAACCAAAAAT	-154870216	True	NA	NA	False	AATAAA	-20	NA	154870278	154697473	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154708273_154713463_154713534_154714875_154715004_154725915_154726027_154733002_154733145_154737043_154737089_154771974_154772394_154822088_154822185_154869031
transcript_145051.known	chr3	-	1542	15	FSM	ENSG00000114767.7	ENST00000232888.7	1542	15	0	0	0	0	multi-exon	FALSE	canonical	3	408	junction_14	24.7146985927527	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTCTTGTAGCTTCTT	-51934951	True	NA	-6	True	ATTAAA	-18	NA	51941904	51933428	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_51933600_51933707_51933782_51934471_51934552_51934630_51934777_51935196_51935260_51935341_51935477_51935591_51935693_51936256_51936350_51936430_51936556_51937191_51937319_51937544_51937587_51937668_51937737_51938094_51938205_51941408_51941492_51941780
transcript_145053.nnic	chr3	-	1569	15	NNC	ENSG00000114767.7	novel	1542	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_9	117.378421686233	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTCTTGTAGCTTCTT	-51934951	True	NA	-6	True	ATTAAA	-18	NA	51941904	51933428	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_51933600_51933707_51933782_51934471_51934552_51934630_51934777_51935196_51935260_51935341_51935477_51935591_51935693_51936256_51936350_51936430_51936583_51937191_51937319_51937544_51937587_51937668_51937737_51938094_51938205_51941408_51941492_51941780
transcript_14506.known	chr1	-	13034	8	FSM	ENSG00000143603.19	ENST00000271915.9	13034	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	3.24509048331444	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGTGACTGATTTCCTT	-154870219	True	NA	NA	False	AATAAA	-39	NA	154870281	154697454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154708273_154713463_154713534_154714875_154715004_154725915_154726027_154733002_154733145_154771974_154772394_154822088_154822185_154869031
transcript_145068.known	chr3	+	2337	11	FSM	ENSG00000041880.15	ENST00000398755.8	2337	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	3.26955654485436	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGAATGGTACTCTGTTA	51942269	True	NA	13	True	CATAAA	-25	NA	51942362	51948867	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51942709_51943353_51943539_51944088_51944218_51944389_51944579_51944777_51944911_51944997_51945225_51945494_51945645_51945852_51945940_51946165_51946344_51947739_51947896_51948310
transcript_145069.known	chr3	+	2096	11	FSM	ENSG00000041880.15	ENST00000431474.6	2096	11	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	3.26955654485436	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACCATGCTGTACAAGAT	51942251	True	NA	NA	False	AATACA	-21	NA	51942344	51948603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51942709_51943348_51943539_51944088_51944218_51944389_51944579_51944777_51944911_51944997_51945225_51945494_51945645_51945852_51945940_51946165_51946344_51947739_51947896_51948310
transcript_145070.known	chr3	+	2393	11	FSM	ENSG00000041880.15	ENST00000471971.6	2393	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	2.86530975637888	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACTATAGTCACCATGCT	51942283	True	NA	NA	False	AATACA	-12	NA	51942376	51948594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51943047_51943348_51943539_51944088_51944218_51944389_51944579_51944777_51944911_51944997_51945225_51945494_51945645_51945852_51945940_51946165_51946344_51947739_51947896_51948310
transcript_145072.known	chr3	+	1952	10	FSM	ENSG00000041880.15	ENST00000498510.2	1952	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	2.98556196500987	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATAAGGGCAGCTTTTATA	51943156	False	NA	NA	False	NA	NA	NA	51943249	51948724	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51943539_51944088_51944218_51944389_51944579_51944777_51944911_51944997_51945225_51945494_51945645_51945852_51945940_51946165_51946344_51947739_51947896_51948310
transcript_145081.known	chr3	+	1422	15	FSM	ENSG00000243989.9	ENST00000636358.2	1422	15	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_6	28.5500813108675	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACACTCGTGGAGCAAGAA	51981564	True	NA	38	True	AATAAA	-38	NA	51983534	51989197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51983590_51984046_51984159_51985206_51985272_51985360_51985466_51985851_51985947_51986254_51986332_51986414_51986505_51986604_51986662_51986987_51987062_51987146_51987197_51987308_51987454_51987555_51987625_51988523_51988604_51988765_51988827_51988910
transcript_145088.nic	chr3	-	2160	15	NIC	ENSG00000090097.22	novel	2009	14	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_12	62.0125069676123	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTTGTGAAATACTGGT	-51967457	False	NA	-14	True	AATAAA	-16	NA	51968432	51957457	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_51958350_51958789_51958960_51959046_51959100_51959228_51959293_51959366_51959412_51959576_51959652_51959894_51960024_51960188_51960321_51960525_51960643_51960865_51960899_51961009_51961034_51961159_51961305_51962809_51962893_51967325_51967435_51968343
transcript_145092.known	chr3	+	1457	14	FSM	ENSG00000243989.9	ENST00000636880.1	1457	14	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	95.9915553485037	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACACTCGTGGAGCAAGAA	51983263	False	NA	38	True	AATAAA	-38	NA	51983434	51989197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51983590_51984046_51984159_51985360_51985466_51985851_51985947_51986254_51986332_51986414_51986505_51986604_51986662_51986987_51987062_51987146_51987197_51987308_51987454_51987555_51987625_51988523_51988604_51988765_51988827_51988910
transcript_145093.known	chr3	+	1409	14	FSM	ENSG00000243989.9	ENST00000476351.5	1409	14	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	94.9762349595971	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACACTCGTGGAGCAAGAA	51983271	False	NA	38	True	AATAAA	-38	NA	51983442	51989197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51983590_51984046_51984159_51985400_51985466_51985851_51985947_51986254_51986332_51986414_51986505_51986604_51986662_51986987_51987062_51987146_51987197_51987308_51987454_51987555_51987625_51988523_51988604_51988765_51988827_51988910
transcript_145095.known	chr3	-	2156	14	FSM	ENSG00000090097.22	ENST00000461554.6	2156	14	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_13	49.6473957557236	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTTGTGAAATACTGGT	-51966479	False	975	-14	True	AATAAA	-16	NA	51967454	51957457	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_51958350_51958789_51958960_51959046_51959100_51959228_51959293_51959366_51959412_51959576_51959652_51959894_51960024_51960188_51960321_51960525_51960643_51960865_51960899_51961009_51961034_51961159_51961305_51961940_51962089_51967325
transcript_145097.nic	chr3	-	2085	14	NIC	ENSG00000090097.22	novel	2156	14	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_13	46.0821237594093	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTTGTGAAATACTGGT	-51967431	False	975	-14	True	AATAAA	-16	NA	51968406	51957457	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_51958350_51958789_51958960_51959046_51959100_51959228_51959293_51959366_51959412_51959576_51959652_51959894_51960024_51960188_51960321_51960525_51960643_51960865_51960899_51961009_51961034_51961159_51961305_51967325_51967435_51968309
transcript_145098.nic	chr3	-	2077	14	NIC	ENSG00000090097.22	novel	2156	14	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_13	41.3844724046715	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTTGTGAAATACTGGT	-51967457	False	NA	-14	True	AATAAA	-16	NA	51968432	51957457	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_51958350_51958789_51958960_51959046_51959100_51959228_51959293_51959366_51959412_51959576_51959652_51959894_51960024_51960188_51960321_51960525_51960643_51960865_51960899_51961009_51961034_51961159_51961305_51967325_51967435_51968343
transcript_14510.known	chr1	-	1002	5	FSM	ENSG00000163344.6	ENST00000368467.4	1002	5	0	0	0	0	multi-exon	FALSE	canonical	3	468	junction_2	23.2701525564402	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCAGAGCTGCTTGTCTC	-154933853	True	NA	-7	True	AATAAA	-15	NA	154936719	154924739	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154925266_154926353_154926484_154929023_154929177_154932351_154932416_154936590
transcript_145102.known	chr3	+	1319	13	FSM	ENSG00000243989.9	ENST00000476854.5	1319	13	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_9	98.4954525177009	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACACTCGTGGAGCAAGAA	51983271	False	NA	38	True	AATAAA	-38	NA	51983442	51989197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51983590_51984046_51984159_51985206_51985272_51985360_51985466_51985851_51985947_51986254_51986332_51986414_51986505_51986604_51986662_51986987_51987062_51987555_51987625_51988523_51988604_51988765_51988827_51988910
transcript_145104.nnic	chr3	-	2064	13	NNC	ENSG00000090097.22	novel	2156	14	NA	NA	-80	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	48.9310030099073	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTTGTGAAATACTGGT	-51966562	False	NA	-14	True	AATAAA	-16	NA	51967537	51957457	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_51958350_51958789_51958933_51959046_51959100_51959228_51959293_51959366_51959412_51959576_51959652_51959894_51960024_51960188_51960321_51960525_51960643_51960865_51960899_51961009_51961034_51961159_51961305_51967325
transcript_145107.known	chr3	-	2015	13	FSM	ENSG00000090097.22	ENST00000355852.6	2015	13	0	0	0	0	multi-exon	TRUE	canonical	3	119	junction_12	21.4566746931786	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGAAATACTGGTGTTG	-51966482	False	975	-10	True	AATAAA	-20	NA	51967457	51957453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_51958350_51958789_51958960_51959046_51959100_51959228_51959293_51959366_51959412_51959576_51959652_51959894_51960024_51960188_51960321_51960525_51960643_51960865_51960899_51961009_51961034_51961159_51961305_51967325
transcript_145112.nic	chr3	-	1857	13	NIC	ENSG00000090097.22	novel	1784	13	NA	NA	-80	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	43.3480744157749	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATCCCTGTTTTTGAATA	-51966562	False	NA	-51	True	NA	NA	NA	51967537	51957494	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_51958153_51958789_51958960_51959046_51959100_51959228_51959293_51959366_51959412_51959576_51959652_51959894_51960024_51960188_51960321_51960525_51960643_51960865_51960899_51961009_51961034_51961159_51961305_51967325
transcript_145124.known	chr3	+	1066	5	FSM	ENSG00000248487.10	ENST00000273596.8	1066	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	5.78791845139511	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACAGGTTCCGTTTCCTG	51974600	True	NA	10	True	AATAAA	-26	NA	51975063	51981196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51975205_51977870_51978083_51978258_51978375_51980392_51980629_51980835
transcript_14513.nnic	chr1	-	2444	12	NNC	ENSG00000163346.17	novel	3207	11	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_2	21.5494817870235	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTCCTGTTTTGGGCA	-154956139	False	5085	-27	True	AATAAA	-17	NA	154956149	154944079	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_154945118_154945571_154945677_154946489_154946804_154947416_154947549_154947641_154947713_154947981_154948006_154948132_154948367_154951231_154951398_154951470_154951536_154951794_154951922_154953670_154953758_154956068
transcript_145130.known	chr3	-	1657	4	FSM	ENSG00000114779.20	ENST00000361143.10	1657	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	7.78888096369861	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCACCGGCTCCTGCTTCT	-51973074	True	NA	-4	True	AATAAA	-15	NA	51974049	51968514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_51969606_51969942_51970185_51971459_51971699_51973964
transcript_145131.known	chr3	-	1818	4	FSM	ENSG00000114779.20	ENST00000395008.6	1818	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	18.624953392932	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATGCAATTAGACCCCA	-51973056	True	NA	-19	True	NA	NA	NA	51974031	51968529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_51969606_51969942_51970185_51971459_51971893_51973964
transcript_145132.known	chr3	+	781	2	FSM	ENSG00000243989.9	ENST00000496679.2	781	2	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAGGCTGGCAGATTGCT	51983168	False	NA	NA	False	NA	NA	NA	51983339	51984577	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51983590_51984046
transcript_145134.known	chr3	+	2119	1	FSM	ENSG00000180929.6	ENST00000322241.6	2119	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTACAGAGTGTCTGCTGC	NA	False	NA	NA	False	AAAACA	-14	NA	51955380	51957499	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51955400_51957500
transcript_145135.known	chr3	+	674	3	FSM	ENSG00000248487.10	ENST00000491470.1	674	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	28.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACAGGTTCCGTTTCCT	51974639	True	NA	9	True	AATAAA	-25	NA	51975102	51981195	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_51975205_51977870_51978083_51980835
transcript_145136.known	chr3	-	910	4	FSM	ENSG00000162244.12	ENST00000648640.1	910	4	0	0	0	0	multi-exon	FALSE	canonical	2	52	junction_3	3844.51265514311	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGGCCCTGAAGTGCAAG	-51844032	True	NA	76	True	NA	NA	NA	51995857	51993521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_51994127_51995041_51995107_51995424_51995470_51995662
transcript_145137.known	chr3	-	713	4	FSM	ENSG00000162244.12	ENST00000495383.5	713	4	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_3	3787.56104461257	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTTAGCCTCTGTCTAT	-51844019	True	NA	-31	True	AATAAA	-12	NA	51995844	51993628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_51994127_51995041_51995107_51995424_51995470_51995739
transcript_145138.known	chr3	-	537	4	FSM	ENSG00000162244.12	ENST00000492277.5	537	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	3861.92813098443	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATCTCTGCCAACATGAG	-51843989	False	NA	NA	False	NA	NA	NA	51995814	51993749	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_51994127_51995041_51995107_51995424_51995470_51995764
transcript_145139.known	chr3	-	551	4	FSM	ENSG00000162244.12	ENST00000475248.5	551	4	0	0	0	0	multi-exon	FALSE	canonical	2	93	junction_3	3825.21470711848	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGGTGCGACCCCCCAC	-51843990	False	NA	-125	True	NA	NA	NA	51995815	51993722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_51994127_51995041_51995107_51995424_51995470_51995778
transcript_145140.known	chr3	-	754	4	FSM	ENSG00000162244.12	ENST00000294189.11	754	4	0	0	0	0	multi-exon	FALSE	canonical	3	4442	junction_3	1781.87223634768	3680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGGCCCTGAAGTGCAAG	-51844070	True	NA	76	True	NA	NA	NA	51995895	51993521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_51994127_51995041_51995107_51995424_51995470_51995856
transcript_145143.known	chr3	-	880	3	FSM	ENSG00000162244.12	ENST00000481629.1	880	3	0	0	0	0	multi-exon	FALSE	canonical	3	4442	junction_2	1746.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGTGGTGGTACACTTT	-51844056	True	NA	NA	False	NA	NA	NA	51995881	51994296	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_51995107_51995424_51995470_51995856
transcript_145145.known	chr3	-	3361	3	FSM	ENSG00000164086.10	ENST00000495880.2	3361	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	1	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTCGTGTCCGATAAGGG	-52056307	False	NA	-2	True	AATAAA	-20	NA	52056571	52048918	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52051123_52053939_52054375_52055849
transcript_145154.known	chr3	-	1936	11	FSM	ENSG00000164087.8	ENST00000296484.7	1936	11	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_2	36.6	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACTTAATCAATCTTCC	-52152562	True	NA	8	True	ATTAAA	-43	NA	52154423	52075225	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52075986_52096568_52096713_52122378_52122478_52125112_52125182_52138168_52138303_52145845_52145962_52146987_52147096_52149209_52149390_52149815_52149988_52151015_52151101_52154354
transcript_145155.known	chr3	-	1760	11	FSM	ENSG00000164087.8	ENST00000474012.1	1760	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_10	65.158575797818	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGGTTTTCTCTAAATCT	-52152543	True	NA	NA	False	NA	NA	NA	52154404	52075453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52075986_52096568_52096713_52122378_52122478_52125112_52125182_52138168_52138303_52145845_52145962_52146987_52147096_52149209_52149390_52149815_52149988_52151015_52151172_52154354
transcript_14516.known	chr1	-	3207	11	FSM	ENSG00000163346.17	ENST00000368463.8	3207	11	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_6	9.17877987534291	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTCCTGTTTTGGGCA	-154956089	False	5085	-27	True	AATAAA	-17	NA	154956099	154944079	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154945118_154945571_154946804_154947416_154947549_154947641_154947713_154947981_154948006_154948132_154948367_154951231_154951398_154951470_154951536_154951794_154951922_154953670_154953758_154956068
transcript_145161.nnic	chr3	-	2149	10	NIC	ENSG00000164087.8	novel	1936	11	NA	NA	-45	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_2	64.3959587720599	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACTTAATCAATCTTCC	-52154508	False	NA	8	True	ATTAAA	-43	NA	52154735	52075225	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_52075986_52096568_52096713_52125112_52125182_52138168_52138303_52145845_52145962_52146987_52147096_52149209_52149390_52149815_52149988_52151015_52151101_52154354
transcript_145164.known	chr3	-	1999	10	FSM	ENSG00000164087.8	ENST00000394970.6	1999	10	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	45.8728785629845	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAATCTCAAAATTAAACC	-52154463	False	NA	-52	True	NA	NA	NA	52154690	52075285	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52075986_52122378_52122478_52125112_52125182_52138168_52138303_52145845_52145962_52146987_52147096_52149209_52149390_52149815_52149988_52151015_52151101_52154354
transcript_145174.known	chr3	+	2375	12	FSM	ENSG00000023330.15	ENST00000484952.6	2375	12	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	100.185695354771	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTCTGCTATTGGCTA	52196164	True	NA	33	True	AATAAA	-18	NA	52198159	52214327	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52198256_52198671_52198849_52199209_52199441_52202506_52202735_52203862_52204013_52204692_52204916_52205838_52206024_52206571_52206752_52208082_52208248_52211282_52211552_52212257_52212421_52214019
transcript_145180.known	chr3	+	2212	11	FSM	ENSG00000023330.15	ENST00000310271.6	2212	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	97.6280697340678	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTCTTTCTGCTATTGG	52196136	True	NA	30	True	AATAAA	-15	NA	52198131	52214324	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52198256_52199220_52199441_52202506_52202735_52203862_52204013_52204692_52204916_52205838_52206024_52206571_52206752_52208082_52208248_52211282_52211552_52212257_52212421_52214019
transcript_145187.known	chr3	+	2125	11	FSM	ENSG00000023330.15	ENST00000469224.5	2125	11	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	46.4182076345048	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGACCTCAATTATTTCA	52196090	True	NA	NA	False	NA	NA	NA	52198085	52214180	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52198256_52199209_52199441_52202506_52202735_52203862_52204013_52204692_52204916_52205838_52206024_52206571_52206752_52208082_52208248_52211282_52211552_52212257_52212421_52214019
transcript_145189.known	chr3	+	2231	10	FSM	ENSG00000164088.18	ENST00000323588.9	2231	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	5.59761854124889	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGTGAGTCATGAATTG	52245529	True	NA	11	True	ATTAAA	-17	NA	52245758	52250599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52246049_52246694_52246813_52246973_52247229_52247681_52247795_52248152_52248238_52248334_52248454_52248636_52248701_52248955_52249064_52249173_52249323_52249669
transcript_145194.known	chr3	+	1790	9	FSM	ENSG00000164088.18	ENST00000409502.7	1790	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	9.11643433585741	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCTTGTGAGTCATGAAT	52245979	False	NA	9	True	ATTAAA	-15	NA	52246208	52250597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52246315_52246694_52246813_52247681_52247795_52248152_52248238_52248334_52248454_52248636_52248701_52248955_52249064_52249173_52249323_52249669
transcript_145195.known	chr3	-	1579	9	FSM	ENSG00000247596.10	ENST00000676989.1	1579	9	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_7	152.787434038274	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAATATTTTTAAATCA	-52234980	True	NA	6	True	NA	NA	NA	52239149	52228632	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52229202_52229660_52229783_52229919_52230071_52230869_52230996_52231126_52231232_52231443_52231540_52231943_52232118_52235028_52235107_52238991
transcript_145197.known	chr3	-	1426	8	FSM	ENSG00000247596.10	ENST00000678838.1	1426	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	164.687335175923	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTGCTTGGCCCTGAG	-52234980	True	NA	-21	True	AATAAA	-16	NA	52239149	52228611	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52229202_52229660_52229783_52229919_52230071_52230869_52230996_52231126_52231232_52231443_52231540_52235028_52235107_52238991
transcript_1452.nnic	chr1	+	963	8	NNC	ENSG00000157916.20	novel	695	8	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_1	417.088352603559	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGAGTCAAATTTTCTTTT	2381504	True	NA	19	True	CATAAA	-14	NA	2391771	2403216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_2391959_2393269_2393356_2395783_2395872_2397115_2397221_2399414_2399515_2400856_2400936_2402206_2402343_2403034
transcript_145200.known	chr3	+	1101	2	FSM	ENSG00000243224.1	ENST00000483834.1	1101	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTTTGTGTTGTATACT	52239020	True	NA	NA	False	AATGAA	-7	NA	52239257	52241097	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52239436_52240174
transcript_145201.known	chr3	-	1531	8	FSM	ENSG00000247596.10	ENST00000678352.1	1531	8	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_1	14.5882256128226	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTGCTTGGCCCTGAG	-52231021	False	4169	-21	True	AATAAA	-16	NA	52235190	52228611	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52229202_52229660_52229783_52229919_52230071_52230869_52230996_52231126_52231232_52231443_52231540_52231943_52232123_52235028
transcript_145203.known	chr3	-	4286	9	FSM	ENSG00000164091.12	ENST00000296490.8	4286	9	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_4	12.507497751349	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGGCTGCAGCCTCTT	-52273991	True	NA	-22	True	TATAAA	-32	NA	52278649	52254433	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52257520_52258535_52258679_52259196_52259267_52259716_52259873_52260384_52260502_52261379_52261480_52266951_52267019_52270711_52270810_52278200
transcript_145208.nic	chr3	+	1450	7	NIC	ENSG00000168237.18	novel	992	6	NA	NA	-27	0	combination_of_known_junctions	TRUE	canonical	3	7	junction_2	5.4594464513864	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTCTCAGTGCGCCTTC	52287093	True	NA	12	True	AATAAA	-14	NA	52287792	52293471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_52287877_52290303_52290720_52290959_52291112_52291746_52291923_52292259_52292570_52293045_52293193_52293306
transcript_145211.known	chr3	+	992	6	FSM	ENSG00000168237.18	ENST00000471180.5	992	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	5.2687759489278	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTCTCAGTGCGCCTTC	52287135	True	NA	12	True	AATAAA	-14	NA	52287834	52293471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52287877_52290959_52291112_52291746_52291923_52292259_52292570_52293045_52293193_52293306
transcript_145212.known	chr3	+	3791	5	FSM	ENSG00000168237.18	ENST00000436784.7	3791	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	6.17960354715414	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCCCGTCCCTTGCTCTTG	52287128	True	NA	12	True	CATAAA	-22	NA	52287827	52295257	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52287877_52290303_52290720_52290959_52291112_52291746_52291923_52292259
transcript_145216.nic	chr3	+	2679	4	NIC	ENSG00000168237.18	novel	2019	5	NA	NA	-27	0	intron_retention	FALSE	canonical	3	7	junction_2	7.11805216802087	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCAGTGCGCCTTCCCTC	52287093	True	NA	16	True	AATAAA	-18	NA	52287792	52293475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_52287877_52290303_52290720_52290959_52291923_52292259
transcript_145223.known	chr3	-	3600	17	FSM	ENSG00000163930.10	ENST00000460680.6	3600	17	0	0	0	0	multi-exon	TRUE	canonical	3	221	junction_9	39.4966375151101	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAACCCTCCTGTGGTTGCT	-52406407	True	NA	16	True	AATAAA	-26	NA	52410008	52401007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52402422_52402601_52402675_52402778_52402872_52403137_52403299_52403415_52403895_52404452_52404587_52405109_52405295_52405764_52405913_52406252_52406377_52406828_52406908_52407173_52407317_52407398_52407461_52407957_52408078_52408473_52408607_52409553_52409609_52409713_52409744_52409841
transcript_145224.known	chr3	-	3434	17	FSM	ENSG00000163930.10	ENST00000296288.9	3434	17	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_9	72.9777095677166	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAATCTCCTGAGAAATG	-52409894	False	NA	-2	True	AATAAA	-8	NA	52409914	52401025	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52402422_52402601_52402675_52402778_52402872_52403137_52403299_52403415_52403895_52404452_52404587_52405109_52405295_52405764_52405913_52406252_52406323_52406828_52406908_52407173_52407317_52407398_52407461_52407957_52408078_52408473_52408607_52409553_52409609_52409713_52409744_52409841
transcript_145225.known	chr3	+	2127	11	FSM	ENSG00000010318.22	ENST00000327906.8	2127	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	13.4569684550422	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGTCTCCTTATAAATT	52409267	True	NA	8	True	AATAAA	-14	NA	52410659	52423641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52411248_52412810_52412921_52413995_52414049_52414495_52414588_52419832_52419935_52420310_52420436_52420902_52421063_52421647_52421755_52422221_52422339_52422759_52422882_52423090
transcript_145227.known	chr3	+	1472	10	FSM	ENSG00000010318.22	ENST00000347025.6	1472	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	12.3827837473378	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGTGTCTCCTTATAAAT	52409804	False	NA	7	True	AATAAA	-13	NA	52411196	52423640	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52411248_52412810_52412921_52413995_52414049_52414495_52414588_52419832_52419935_52420310_52420436_52420902_52421063_52421647_52421755_52422759_52422882_52423090
transcript_145228.nic	chr3	+	2261	10	NIC	ENSG00000010318.22	novel	2127	11	NA	NA	-159	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_8	12.4642699221157	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGTCTCCTTATAAATT	52409108	True	NA	8	True	AATAAA	-14	NA	52410500	52423641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_52411340_52412810_52412921_52413995_52414049_52414495_52414588_52419832_52419935_52420310_52420436_52420902_52421063_52421647_52421755_52422759_52422882_52423090
transcript_14523.nnic	chr1	-	2817	10	NIC	ENSG00000163346.17	novel	3207	11	NA	NA	-36	-363	combination_of_known_splicesites	FALSE	canonical	1	1	junction_9	25.0687942359509	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGCTAGGTGGTTTCT	-154956149	False	NA	-4	True	AATAAA	-14	NA	154956159	154944442	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_154945118_154945571_154946804_154947416_154947549_154947641_154947713_154947981_154948006_154948132_154948367_154951231_154951398_154951470_154951536_154951794_154951922_154956068
transcript_145233.known	chr3	+	576	5	FSM	ENSG00000010318.22	ENST00000482327.5	576	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	9.90896059130321	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAATTAAAAAAAAAAAA	52409643	False	NA	NA	False	NA	NA	NA	52411035	52414836	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52411248_52412810_52412921_52413995_52414049_52414495_52414588_52414727
transcript_145234.nic	chr3	+	1203	5	NIC	ENSG00000010318.22	novel	576	5	NA	NA	-159	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	9.54921462739214	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAATTAAAAAAAAAAAA	52409108	True	NA	NA	False	NA	NA	NA	52410500	52414836	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_52411340_52412810_52412921_52413995_52414049_52414495_52414588_52414727
transcript_145237.known	chr3	+	962	4	FSM	ENSG00000010318.22	ENST00000473145.5	962	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	7.40870359029762	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	52409497	False	NA	NA	False	NA	NA	NA	52410889	52414844	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52411340_52412810_52412921_52413995_52414049_52414495
transcript_145239.known	chr3	-	4993	16	FSM	ENSG00000010319.7	ENST00000231721.7	4993	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	1.37598449603669	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTCTTGGGACTTCAGGA	-52444767	False	336	NA	False	ATTAAA	-36	NA	52445103	52433034	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52436074_52437526_52437667_52437970_52438200_52438919_52438962_52439679_52439772_52439866_52440099_52440376_52440522_52440753_52440824_52440933_52441049_52441263_52441410_52441573_52441691_52441818_52441910_52442184_52442305_52442558_52442622_52442746_52442908_52444912
transcript_145243.known	chr3	-	687	6	FSM	ENSG00000114854.8	ENST00000232975.8	687	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	4.84148737476408	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGCTATCTGGCTCTGG	-52453705	True	NA	-3	True	AATAAA	-15	NA	52454041	52451099	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52451307_52451390_52451528_52451743_52451859_52452105_52452253_52452482_52452514_52453991
transcript_145251.known	chr3	+	5139	21	FSM	ENSG00000010322.16	ENST00000345716.9	5139	21	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_13	34.3459968555289	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATCTTCTAAACCAAGGG	52446179	True	NA	13	True	AATAAA	-19	NA	52455603	52493068	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52455735_52457842_52457927_52458661_52458845_52470858_52470908_52471813_52471978_52472302_52472399_52473733_52473830_52476446_52476600_52477573_52477643_52478096_52478283_52478448_52478578_52479748_52479863_52480183_52480296_52484512_52484638_52485777_52485828_52487195_52488606_52489335_52489679_52490074_52490232_52490704_52490834_52491351_52491514_52491871
transcript_145266.known	chr3	+	2589	14	FSM	ENSG00000010322.16	ENST00000420808.2	2589	14	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_13	77.5970474641138	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCACCTCTCTTTCCTTT	52446192	True	NA	10	True	AATAAA	-20	NA	52455616	52481914	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52455735_52457842_52457927_52458661_52458845_52470858_52470908_52471813_52471978_52472302_52472399_52473733_52473830_52476446_52476600_52477573_52477643_52478096_52478283_52478448_52478578_52479748_52479863_52480183_52480296_52480878
transcript_145270.known	chr3	+	3168	13	FSM	ENSG00000010322.16	ENST00000488380.5	3168	13	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_10	30.3694839527371	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGCACCTCTCTTTC	52446192	True	NA	6	True	AATAAA	-16	NA	52455616	52481910	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52455735_52457842_52457927_52458661_52458845_52470858_52470908_52471813_52471978_52472302_52472399_52473733_52473830_52476446_52476600_52477573_52477643_52478096_52478283_52478448_52478578_52479748_52479863_52480183
transcript_14528.known	chr1	-	3144	10	FSM	ENSG00000163346.17	ENST00000368465.5	3144	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	25.3615826900296	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTGTTTTGGGCACTCA	-154956111	False	5085	-23	True	AATAAA	-21	NA	154956121	154944075	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154945118_154945571_154946804_154947416_154947549_154947641_154947713_154947981_154948006_154948132_154948367_154951231_154951398_154951470_154951536_154951794_154951920_154956068
transcript_145291.nic	chr3	-	3129	19	NIC	ENSG00000163939.18	novel	5071	30	NA	NA	-27	5562	combination_of_known_junctions	FALSE	canonical	3	39	junction_17	63.8513899613783	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTGGTTTCTTTTCATT	-52680363	True	NA	54	True	GATAAA	-23	NA	52685944	52603523	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_52603733_52609312_52609956_52615350_52615457_52617261_52617539_52627272_52627371_52628893_52629036_52634601_52634816_52641953_52642046_52643247_52643344_52644703_52644790_52648343_52648443_52651741_52651811_52658198_52658316_52662132_52662277_52668497_52668646_52678499_52678598_52679573_52679727_52682091_52682234_52685748
transcript_145293.nic	chr3	-	3005	18	NIC	ENSG00000163939.18	novel	5071	30	NA	NA	-45	5562	combination_of_known_junctions	FALSE	canonical	3	141	junction_17	30.4686576722051	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTGGTTTCTTTTCATT	-52680381	True	NA	54	True	GATAAA	-23	NA	52685962	52603523	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_52603733_52609312_52609956_52615350_52615457_52617261_52617539_52627272_52627371_52628893_52629036_52634601_52634816_52641953_52642046_52643247_52643344_52644703_52644790_52648343_52648443_52651741_52651811_52658198_52658316_52662132_52662277_52668497_52668646_52678499_52678598_52679573_52679727_52685748
transcript_145294.nnic	chr3	-	3032	18	NNC	ENSG00000163939.18	novel	5071	30	NA	NA	-45	5562	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_13	60.9280590015998	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTGGTTTCTTTTCATT	-52680381	True	NA	54	True	GATAAA	-23	NA	52685962	52603523	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_52603733_52609312_52609956_52615350_52615457_52617261_52617539_52627272_52627371_52628893_52629036_52634601_52634816_52641953_52642046_52643247_52643344_52644703_52644790_52648343_52648443_52651741_52651811_52658198_52658343_52662132_52662277_52668497_52668646_52678499_52678598_52679573_52679727_52685748
transcript_145304.nic	chr3	-	1769	14	NIC	ENSG00000163939.18	novel	5071	30	NA	NA	-45	-18188	combination_of_known_junctions	FALSE	canonical	3	141	junction_13	31.4320907888888	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATATACTCTTCTTATAG	-52680381	True	NA	NA	False	AAGAAA	-3	NA	52685962	52627273	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_52627371_52628893_52629036_52634601_52634816_52641953_52642046_52643247_52643344_52644703_52644790_52648343_52648443_52651741_52651811_52658198_52658316_52662132_52662277_52668497_52668646_52678499_52678598_52679573_52679727_52685748
transcript_145309.nic	chr3	-	1477	12	NIC	ENSG00000163939.18	novel	5071	30	NA	NA	-45	17109	combination_of_known_junctions	FALSE	canonical	3	141	junction_11	33.3064905694008	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCTGATTATTACCAGCA	-52680381	True	NA	NA	False	AAGAAA	-4	NA	52685962	52634654	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_52634816_52641953_52642046_52643247_52643344_52644703_52644790_52648343_52648443_52651741_52651811_52658198_52658316_52662132_52662277_52668497_52668646_52678499_52678598_52679573_52679727_52685748
transcript_145317.known	chr3	-	517	5	FSM	ENSG00000163939.18	ENST00000450271.5	517	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	114.362362689829	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTCAGCCCATTGACTT	-52680269	False	NA	-31	True	TTTAAA	-45	NA	52685850	52668620	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52668646_52678499_52678598_52679573_52679724_52682091_52682234_52685748
transcript_145319.known	chr3	-	5071	30	FSM	ENSG00000163939.18	ENST00000394830.7	5071	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	70.9572395561025	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCCTTCGTTTAAAACC	-52680255	False	NA	-5	True	AATACA	-19	NA	52685836	52547840	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52548236_52550420_52550638_52550746_52550818_52554723_52554880_52561766_52561969_52563363_52563494_52564049_52564234_52576540_52576699_52579053_52579200_52586424_52586689_52587352_52587436_52589069_52589256_52603520_52603733_52609312_52609956_52615350_52615457_52617261_52617539_52627272_52627371_52628893_52629036_52634601_52634816_52641953_52642046_52643247_52643344_52644703_52644790_52648343_52648443_52651741_52651811_52658198_52658316_52662132_52662277_52668497_52668646_52678499_52678598_52679573_52679724_52685748
transcript_145320.known	chr3	-	783	6	FSM	ENSG00000163939.18	ENST00000420148.5	783	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	98.2975075981075	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAGGAGAAGCAGATGAC	-52680336	True	NA	NA	False	AAGAAA	-12	NA	52685917	52662203	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52662277_52668497_52668646_52678499_52678598_52679573_52679727_52682091_52682234_52685748
transcript_145327.known	chr3	-	1877	14	FSM	ENSG00000168268.11	ENST00000422318.7	1877	14	0	0	0	0	multi-exon	FALSE	canonical	3	1764	junction_13	151.739421611544	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGCTTCTGCTTTCAGC	-52513679	True	NA	-23	True	AATAAA	-17	NA	52533857	52524386	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52524732_52524816_52524882_52524962_52525104_52525208_52525296_52527293_52527376_52527616_52527719_52527828_52527932_52528012_52528074_52528182_52528312_52528445_52528540_52528636_52528693_52528860_52528936_52529149_52529335_52533505
transcript_145328.nnic	chr3	-	1684	15	NNC	ENSG00000168268.11	novel	1877	14	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	534.097082820671	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGCTTCTGCTTTCAGC	-52513644	True	NA	-23	True	AATAAA	-17	NA	52533822	52524386	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_52524732_52524816_52524882_52524962_52525104_52525208_52525296_52527293_52527376_52527616_52527719_52527828_52527932_52528012_52528074_52528182_52528312_52528445_52528540_52528636_52528693_52528860_52528936_52529149_52529335_52533505_52533586_52533743
transcript_145333.nic	chr3	-	1712	14	NIC	ENSG00000168268.11	novel	1877	14	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	224	junction_1	496.789408075828	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGCTTCTGCTTTCAGC	-52513634	True	NA	-23	True	AATAAA	-17	NA	52533812	52524386	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_52524612_52524816_52524882_52524962_52525104_52525208_52525296_52527293_52527376_52527616_52527719_52527828_52527932_52528012_52528074_52528182_52528312_52528445_52528540_52528636_52528693_52528860_52528936_52529149_52529335_52533505
transcript_145338.known	chr3	-	2047	14	FSM	ENSG00000168268.11	ENST00000307076.8	2047	14	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_13	552.386623886315	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGCTTCTGCTTTCAGC	-52534963	True	NA	-23	True	AATAAA	-17	NA	52535054	52524386	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52524732_52524816_52524882_52524962_52525104_52525208_52525296_52527293_52527376_52527616_52527719_52527828_52527932_52528012_52528074_52528182_52528312_52528445_52528540_52528636_52528693_52528860_52528936_52529149_52529335_52534532
transcript_145347.known	chr3	-	1639	13	FSM	ENSG00000168268.11	ENST00000459839.5	1639	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_11	573.818659653611	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCACCTTTATTGTCTGGG	-52513599	True	NA	-106	True	NA	NA	NA	52533777	52524469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52524732_52524816_52524882_52524962_52525104_52525208_52525296_52527293_52527376_52527616_52527719_52527828_52527932_52528012_52528074_52528182_52528312_52528445_52528540_52528636_52528693_52529149_52529335_52533505
transcript_145367.known	chr3	+	314	3	FSM	ENSG00000168273.8	ENST00000491607.5	314	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGGTTTCAGTGCCTTT	52533793	True	NA	22	True	AATAAA	-18	NA	52534012	52540526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52534149_52534802_52534878_52540423
transcript_145368.known	chr3	+	274	2	FSM	ENSG00000168273.8	ENST00000307106.3	274	2	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATTGGTTTCAGTGCCTT	52531366	True	NA	21	True	AATAAA	-17	NA	52536601	52540525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52536774_52540423
transcript_145369.known	chr3	+	1769	2	FSM	ENSG00000168273.8	ENST00000477703.6	1769	2	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_1	0	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTGTCTGCTGTGGGT	52531369	True	NA	4	True	AATAAA	-13	NA	52536604	52541890	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52536907_52540423
transcript_145372.known	chr3	-	6053	16	FSM	ENSG00000114904.13	ENST00000233027.10	6053	16	0	0	0	0	multi-exon	TRUE	canonical	3	86	junction_9	26.6699997916927	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCGTGTACTCTTCTATGT	-52769238	True	NA	0	True	AATAAA	-20	NA	52770940	52708443	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52711870_52737585_52737720_52739428_52739635_52741410_52741500_52743351_52743462_52744238_52744306_52746060_52746211_52746733_52746905_52749691_52749830_52751931_52752337_52760794_52760937_52763469_52763625_52765886_52765995_52766177_52766376_52768337_52768605_52770653
transcript_145378.known	chr3	+	1933	15	FSM	ENSG00000163938.17	ENST00000418458.6	1933	15	0	0	0	0	multi-exon	FALSE	canonical	3	1124	junction_7	161.179912786036	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAGTTTTATTTACAGAT	52665075	True	NA	3	True	AATAAA	-24	NA	52686031	52694497	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52686106_52686768_52686828_52687245_52687384_52687501_52687616_52688108_52688193_52689073_52689207_52690591_52690705_52690944_52691072_52691541_52691630_52692871_52693047_52693186_52693330_52693407_52693545_52693631_52693808_52694036_52694104_52694192
transcript_145384.known	chr3	+	2041	15	FSM	ENSG00000163938.17	ENST00000394799.6	2041	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	373.901329339216	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTAAGTTTTATTTA	52665059	True	NA	-2	True	AATAAA	-19	NA	52686015	52694492	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52686203_52686768_52686828_52687245_52687384_52687501_52687616_52688108_52688193_52689073_52689207_52690591_52690705_52690944_52691072_52691541_52691630_52692871_52693047_52693186_52693330_52693407_52693545_52693631_52693808_52694036_52694104_52694192
transcript_145396.known	chr3	+	2118	14	FSM	ENSG00000163938.17	ENST00000496254.5	2118	14	0	0	0	0	multi-exon	FALSE	canonical	3	1133	junction_4	154.638345023087	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTATCTGGAATAAAAAAAG	52665092	True	NA	-35	True	AAAAAG	-29	NA	52686048	52694459	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52686106_52686768_52686828_52687245_52687384_52687501_52687616_52688108_52688193_52689073_52689207_52690591_52691072_52691541_52691630_52692871_52693047_52693186_52693330_52693407_52693545_52693631_52693808_52694036_52694104_52694192
transcript_145408.nic	chr3	+	1878	13	ISM	ENSG00000163938.17	ENST00000418458.6	1933	15	-417	790	-390	-72	5prime_fragment	FALSE	canonical	3	1124	junction_7	106.04987689238	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACATACATGAAGAATTGC	NA	False	NA	-10	True	AATAGA	-7	NA	52685614	52693707	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_52686106_52686768_52686828_52687245_52687384_52687501_52687616_52688108_52688193_52689073_52689207_52690591_52690705_52690944_52691072_52691541_52691630_52692871_52693047_52693186_52693330_52693407_52693545_52693631
transcript_145442.nic	chr3	-	2367	11	NIC	ENSG00000016864.19	novel	1826	11	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_10	70.6458774451843	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTATCTTCTTTTTTTATT	NA	False	NA	-10	True	AATAAA	-17	NA	52706080	52694488	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_52695036_52695189_52695303_52695420_52695588_52695927_52696041_52696233_52696319_52696541_52696660_52697720_52697935_52700261_52700361_52700444_52700497_52704723_52704949_52705446
transcript_145443.nic	chr3	-	2356	11	NIC	ENSG00000016864.19	novel	1826	11	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_10	62.92185629811	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTATCTTCTTTTTTTATT	NA	False	NA	-10	True	AATAAA	-17	NA	52706065	52694488	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_52695036_52695189_52695303_52695420_52695588_52695927_52696041_52696233_52696319_52696541_52696660_52697720_52697935_52700261_52700361_52700444_52700497_52704723_52704953_52705446
transcript_145444.known	chr3	-	1826	11	FSM	ENSG00000016864.19	ENST00000478968.6	1826	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	83.2334668267519	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTATCTTCTTTTTTTATT	-52702692	True	NA	-10	True	AATAAA	-17	NA	52705791	52694488	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52695036_52695189_52695303_52695420_52695588_52695927_52696041_52696233_52696319_52696541_52696660_52697720_52697935_52700261_52700361_52700444_52700497_52704723_52704953_52705702
transcript_145449.known	chr3	-	1856	10	FSM	ENSG00000016864.19	ENST00000266014.11	1856	10	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_9	51.667741924295	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTCTTTTTTTATTCCA	-52702692	True	NA	-7	True	AATAAA	-20	NA	52705791	52694485	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52695036_52695189_52695303_52695420_52695588_52695927_52696041_52696233_52696319_52696541_52696660_52697720_52697935_52700261_52700361_52700444_52700497_52705446
transcript_145450.known	chr3	-	1577	10	FSM	ENSG00000016864.19	ENST00000491606.5	1577	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	82.6599459633665	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACATTTTTCAATAGGTAT	-52702682	True	NA	-24	True	AATAAA	-3	NA	52705781	52694502	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52695036_52695189_52695303_52695420_52695588_52695927_52696041_52696233_52696319_52696541_52696660_52697720_52697935_52700261_52700361_52700444_52700497_52705698
transcript_145457.known	chr3	-	1889	8	FSM	ENSG00000016864.19	ENST00000484163.5	1889	8	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_7	56.0316965690685	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGATAGCATGCGTGGGAA	-52705330	False	NA	NA	False	NA	NA	NA	52705682	52694801	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52695036_52695189_52696041_52696233_52696319_52696541_52696660_52697720_52697935_52700261_52700361_52700444_52700497_52705446
transcript_145460.known	chr3	+	729	7	FSM	ENSG00000163938.17	ENST00000492349.5	729	7	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_5	485.189653640718	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCCTTTATTAGTGGTAA	52665075	True	NA	NA	False	GATAAA	-16	NA	52686031	52690704	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52686106_52686768_52686828_52687245_52687384_52687501_52687616_52688108_52688207_52689073_52689207_52690591
transcript_145465.known	chr3	+	597	4	FSM	ENSG00000163938.17	ENST00000462550.5	597	4	0	0	0	0	multi-exon	FALSE	canonical	3	1388	junction_2	32.6224190124249	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCCAAGGCTGGTCTCA	52665075	True	NA	NA	False	NA	NA	NA	52686031	52687827	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52686106_52686768_52686828_52687245_52687384_52687501
transcript_145469.known	chr3	+	3786	4	FSM	ENSG00000114902.14	ENST00000619898.5	3786	4	0	0	0	0	multi-exon	FALSE	canonical	3	1536	junction_2	86.259299015623	647	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTCAGTTTTAATTTG	52682281	True	NA	NA	False	AAAACA	-20	NA	52706105	52711148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_52706283_52706643_52706704_52706792_52706880_52707686
transcript_145474.nic	chr3	-	1566	11	NIC	ENSG00000248592.7	novel	1405	10	NA	NA	-68	0	intron_retention	FALSE	canonical	1	4	junction_3	76.0568208644037	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAAGGTGTTGGTTGGTC	NA	False	NA	-4	True	AATAAA	-26	NA	52897630	52833120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_52833431_52833616_52833750_52834939_52835004_52840499_52840611_52842810_52842961_52843720_52843799_52844828_52844942_52849791_52849914_52852602_52852699_52855395_52855445_52897290
transcript_145478.known	chr3	-	4744	8	FSM	ENSG00000213533.13	ENST00000355083.11	4744	8	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_2	26.10340504804	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCACATTTGTGGTTGTG	-52893071	True	NA	NA	False	AATAAA	-37	NA	52897548	52836732	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52840611_52842810_52842961_52843720_52843799_52844828_52844942_52849791_52849914_52852602_52852699_52855395_52855445_52897290
transcript_145485.known	chr3	-	4553	21	FSM	ENSG00000163935.14	ENST00000394752.8	4553	21	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_20	16.6775297931079	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAACTGATTGTGATTTT	-53044953	True	NA	-6	True	AATATA	-19	NA	53046073	52903571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_52905277_52906112_52906242_52907068_52907315_52907554_52907734_52911002_52911179_52912537_52912648_52913477_52913618_52916149_52916215_52918483_52918527_52920536_52920651_52921704_52921832_52926030_52926114_52928190_52928342_52930328_52930431_52930940_52931036_52932061_52932309_52934812_52934902_52943352_52943594_52954316_52954412_52969100_52969259_53045815
transcript_145486.nic	chr3	-	3718	21	NIC	ENSG00000163935.14	novel	4553	21	NA	NA	-171	-1039	combination_of_known_junctions	FALSE	canonical	3	20	junction_20	17.8185296812055	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGGCTCTAGGGTTTT	-53046909	False	NA	-2	True	ATTAAA	-21	NA	53046921	52904610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_52905277_52906112_52906242_52907068_52907315_52907554_52907734_52911002_52911179_52912537_52912648_52913477_52913618_52916149_52916215_52918483_52918527_52920536_52920651_52921704_52921832_52926030_52926114_52928190_52928342_52930328_52930431_52930940_52931036_52932061_52932309_52934812_52934902_52943352_52943594_52954316_52954412_52969100_52969259_53046459
transcript_145491.nic	chr3	-	2358	18	ISM	ENSG00000163935.14	ENST00000394752.8	4553	21	-34	4132	-34	-4132	5prime_fragment	FALSE	canonical	3	28	junction_17	14.2207022928694	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTGGGAGGCCACCTGGT	-53046095	False	NA	19	True	AATAAA	-2	NA	53046107	52907703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_52907734_52911002_52911179_52912537_52912648_52913477_52913618_52916149_52916215_52918483_52918527_52920536_52920651_52921704_52921832_52926030_52926114_52928190_52928342_52930328_52930431_52930940_52931036_52932061_52932309_52934812_52934902_52943352_52943594_52954316_52954412_52969100_52969259_53045815
transcript_145492.nic	chr3	-	2722	18	NIC	ENSG00000163935.14	novel	4553	21	NA	NA	-365	-4132	combination_of_known_junctions	FALSE	canonical	3	20	junction_17	15.6514810203855	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTGGGAGGCCACCTGGT	NA	False	NA	19	True	AATAAA	-2	NA	53047115	52907703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_52907734_52911002_52911179_52912537_52912648_52913477_52913618_52916149_52916215_52918483_52918527_52920536_52920651_52921704_52921832_52926030_52926114_52928190_52928342_52930328_52930431_52930940_52931036_52932061_52932309_52934812_52934902_52943352_52943594_52954316_52954412_52969100_52969259_53046459
transcript_145496.nic	chr3	-	2328	17	ISM	ENSG00000163935.14	ENST00000394752.8	4553	21	-34	7431	-34	-7431	5prime_fragment	FALSE	canonical	3	28	junction_16	14.1840579525043	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTCATGTTTTTCCAAT	-53046095	False	NA	NA	False	AATACA	-1	NA	53046107	52911002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_52911179_52912537_52912648_52913477_52913618_52916149_52916215_52918483_52918527_52920536_52920651_52921704_52921832_52926030_52926114_52928190_52928342_52930328_52930431_52930940_52931036_52932061_52932309_52934812_52934902_52943352_52943594_52954316_52954412_52969100_52969259_53045815
transcript_145497.nic	chr3	-	2692	17	NIC	ENSG00000163935.14	novel	4553	21	NA	NA	-365	-7431	combination_of_known_junctions	FALSE	canonical	3	20	junction_16	15.6744218394172	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTCATGTTTTTCCAAT	NA	False	NA	NA	False	AATACA	-1	NA	53047115	52911002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_52911179_52912537_52912648_52913477_52913618_52916149_52916215_52918483_52918527_52920536_52920651_52921704_52921832_52926030_52926114_52928190_52928342_52930328_52930431_52930940_52931036_52932061_52932309_52934812_52934902_52943352_52943594_52954316_52954412_52969100_52969259_53046459
transcript_1455.nnic	chr1	+	3183	8	NNC	ENSG00000157916.20	novel	3028	7	NA	NA	-3	0	intron_retention	FALSE	canonical	3	76	junction_1	417.088352603559	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGAATTACTTCTCAAC	2381504	True	NA	24	True	AATAAA	-16	NA	2391771	2405436	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_2391959_2393269_2393356_2395783_2395872_2397115_2397221_2399414_2399515_2400856_2400936_2402206_2402343_2403034
transcript_145505.known	chr3	-	5081	13	FSM	ENSG00000163933.10	ENST00000296292.8	5081	13	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_7	35.5132017706092	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTTTCTTCTTTCATACC	-53127948	True	NA	4	True	AATAAA	-25	NA	53130435	53088482	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_53092071_53092368_53092619_53099380_53099487_53103952_53104098_53105672_53105804_53106818_53106870_53111829_53111909_53119883_53120022_53121698_53121801_53122373_53122564_53123723_53123841_53125908_53125995_53130337
transcript_145509.known	chr3	-	1800	12	FSM	ENSG00000163933.10	ENST00000394738.7	1800	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	96.5249079317855	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCATTTTATAGTAATCA	-53127966	True	NA	-22	True	TTTAAA	-13	NA	53130453	53091664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_53092071_53092368_53092619_53099380_53099487_53103952_53104098_53105672_53105804_53106818_53106870_53111829_53111909_53119883_53120022_53121698_53121801_53122373_53122564_53125908_53125995_53130337
transcript_145517.known	chr3	+	2833	19	FSM	ENSG00000163932.15	ENST00000330452.8	2833	19	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	18.8536435879967	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTGTCAGGACACGTT	53159826	True	NA	3	True	AATAAA	-17	NA	53161208	53192717	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_53161429_53165103_53165216_53178403_53178538_53179576_53179777_53181206_53181268_53181443_53181607_53181700_53181733_53183120_53183207_53183451_53183582_53184873_53184975_53185603_53185701_53185926_53186028_53186166_53186341_53186603_53186696_53187339_53187403_53188719_53188859_53189057_53189247_53189872_53190002_53192107
transcript_145521.known	chr3	+	2810	18	FSM	ENSG00000163932.15	ENST00000394729.6	2810	18	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	12.6747985795097	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTGTCAGGACACGTT	53161108	False	NA	3	True	AATAAA	-17	NA	53161119	53192717	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_53161429_53178403_53178538_53179576_53179777_53181206_53181268_53181443_53181607_53181700_53181733_53183120_53183207_53183451_53183582_53184873_53184975_53185603_53185701_53185926_53186028_53186166_53186341_53186603_53186696_53187339_53187403_53188719_53188859_53189057_53189247_53189872_53190002_53192107
transcript_145550.known	chr3	-	2831	15	FSM	ENSG00000163931.17	ENST00000423525.6	2831	15	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	1240.54997061458	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTCAGGCAATTGCCCCC	-53153063	True	NA	-21	True	AATAAA	-13	NA	53256000	53224713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_53225610_53225750_53225932_53226755_53226879_53228055_53228150_53228275_53228360_53229006_53229138_53229279_53229437_53230456_53230622_53231356_53231551_53233155_53233275_53234982_53235175_53240250_53240349_53241131_53241246_53242124_53242243_53255835
transcript_145568.known	chr3	-	2075	15	FSM	ENSG00000163931.17	ENST00000423516.5	2075	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_11	1666.39069364827	5650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAATTGGCCCTGAA	-53153085	True	NA	-25	True	AATATA	-10	NA	53256022	53225656	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_53225932_53226755_53226879_53228055_53228150_53228275_53228360_53229006_53229138_53229279_53229437_53230456_53230622_53231356_53231551_53233155_53233275_53234982_53235175_53237796_53237821_53240250_53240349_53241131_53241246_53242124_53242243_53255835
transcript_145583.known	chr3	-	1941	14	FSM	ENSG00000163931.17	ENST00000450814.6	1941	14	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_10	1314.32275628641	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAATTGGCCCTGAA	-53153085	True	NA	-25	True	AATATA	-10	NA	53256022	53225656	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_53225932_53226755_53226879_53228055_53228150_53228275_53228360_53229006_53229138_53229279_53229437_53230456_53230622_53231356_53231551_53233155_53233275_53234982_53235065_53240250_53240349_53241131_53241246_53242124_53242243_53255835
transcript_145588.known	chr3	-	2996	14	FSM	ENSG00000163931.17	ENST00000462138.6	2996	14	0	0	0	0	multi-exon	FALSE	canonical	3	4089	junction_11	426.43206691372	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCAGGCAATTGCCCCCCA	-53153085	True	NA	-19	True	AATAAA	-15	NA	53256022	53224711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_53225932_53226755_53226879_53228055_53228150_53228275_53228360_53229006_53229138_53229279_53229437_53230456_53230622_53231356_53231551_53233155_53233275_53234982_53235175_53240250_53240349_53241131_53241246_53242124_53242243_53255835
transcript_14561.known	chr1	-	3059	13	FSM	ENSG00000160691.19	ENST00000368450.5	3059	13	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_12	291.566304161201	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCTCTTAACCCTTC	-154969137	True	NA	-14	True	ATTAAA	-17	NA	154974376	154962297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154963932_154965542_154965782_154965945_154966078_154966161_154966232_154966318_154966518_154967670_154967798_154967979_154968032_154968203_154968258_154968494_154968615_154968770_154968835_154969377_154969449_154970031_154970200_154974247
transcript_145619.nic	chr3	-	1028	7	ISM	ENSG00000163931.17	ENST00000469678.1	1871	13	-151	5752	-73	0	5prime_fragment	FALSE	canonical	3	4089	junction_4	179.039489747064	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATCCTGGCAACCCCTC	NA	False	NA	NA	False	NA	NA	NA	53256125	53231453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_53231551_53233155_53233275_53234982_53235175_53240250_53240349_53241131_53241246_53242124_53242243_53255835
transcript_145624.nic	chr3	-	2044	11	NIC	ENSG00000272886.6	novel	5926	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_8	83.2995198065391	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-53344772	True	NA	NA	False	NA	NA	NA	53347543	53287365	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_53287661_53288064_53288284_53290790_53290857_53292068_53292828_53304176_53304291_53312240_53312380_53319406_53319474_53338090_53338146_53342143_53342272_53344901_53344943_53347382
transcript_145625.known	chr3	-	5926	10	FSM	ENSG00000272886.6	ENST00000610213.6	5926	10	0	0	0	0	multi-exon	TRUE	canonical	3	187	junction_2	16.7729941672122	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAATTTAATTGTGTTTT	-53344772	True	NA	NA	False	AATAAA	-27	NA	53347543	53283428	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_53287661_53288064_53288284_53290790_53290857_53292068_53292828_53304176_53304291_53312240_53312380_53319406_53319474_53342143_53342272_53344901_53344943_53347382
transcript_145628.known	chr3	-	1853	9	FSM	ENSG00000272886.6	ENST00000294241.10	1853	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	67.353428828828	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-53344754	True	NA	NA	False	NA	NA	NA	53347525	53287369	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_53287661_53288064_53288284_53290790_53290857_53292068_53292828_53312240_53312380_53319406_53319474_53342143_53342272_53344901_53344943_53347382
transcript_145631.nic	chr3	-	2046	7	ISM	ENSG00000272886.6	ENST00000610213.6	5926	10	1	8002	1	1202	5prime_fragment	FALSE	canonical	3	198	junction_1	12.3378370155478	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAATGAATAAGACCTGTA	-53344771	True	NA	NA	False	NA	NA	NA	53347542	53291430	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_53292828_53304176_53304291_53312240_53312380_53319406_53319474_53342143_53342272_53344901_53344943_53347382
transcript_145633.known	chr3	-	581	6	FSM	ENSG00000272886.6	ENST00000559748.5	581	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	86.4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACCGAGACTCTAGAAGAA	-53344753	True	NA	NA	False	NA	NA	NA	53347524	53304220	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_53304291_53312240_53312380_53319406_53319474_53342143_53342272_53344901_53344937_53347382
transcript_145640.known	chr3	-	7694	9	FSM	ENSG00000016391.11	ENST00000315251.11	7694	9	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_6	5.94637494613315	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTCTACTTCTGGATAG	-53845836	True	NA	NA	False	AATAAA	-16	NA	53846419	53812334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_53818196_53818937_53819041_53819531_53819675_53820473_53820609_53821646_53821777_53822490_53822643_53823305_53824068_53840928_53841000_53846082
transcript_145642.nnic	chr3	-	3088	8	NIC	ENSG00000016391.11	novel	7694	9	NA	NA	-43	-4506	combination_of_known_splicesites	FALSE	canonical	2	10	junction_2	12.6652344338866	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGATTTTTTTGGACCT	-53845879	True	NA	NA	False	NA	NA	NA	53846462	53816840	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_53818196_53818937_53819041_53820473_53820609_53821646_53821777_53822490_53822643_53823305_53824068_53840928_53841000_53846082
transcript_145646.known	chr3	+	2016	11	FSM	ENSG00000056736.10	ENST00000288167.8	2016	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	5.40462764674866	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTACTGGACCAAATGAT	53845918	True	NA	NA	False	AATAAA	-14	NA	53846567	53865794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_53846649_53848663_53848689_53849654_53849796_53851998_53852127_53852870_53852998_53855293_53855342_53856843_53856987_53857615_53857691_53858718_53858819_53860129_53860229_53864745
transcript_145650.known	chr3	+	2822	10	FSM	ENSG00000056736.10	ENST00000475124.1	2822	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	5.38401841759365	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAAACATCTAGTCTTCC	53845934	False	NA	-2	True	AATAAA	-9	NA	53846583	53865588	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_53846649_53848663_53848689_53849654_53849796_53851998_53852127_53852870_53852998_53855293_53855342_53856843_53856987_53857615_53858819_53860129_53860229_53864745
transcript_145655.nnic	chr3	-	3215	14	NNC	ENSG00000113812.14	novel	3579	13	NA	NA	-46	3244	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	33.0486462317518	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTGAGGTGTGTGATTG	-53877270	True	NA	NA	False	NA	NA	NA	53882198	53863821	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_53865020_53868673_53868863_53869981_53870146_53871231_53871497_53872383_53872525_53873031_53873128_53874210_53874365_53875947_53876081_53876619_53876714_53877213_53877388_53877646_53877752_53878356_53878468_53879938_53880110_53881978
transcript_145657.known	chr3	-	3579	13	FSM	ENSG00000113812.14	ENST00000335754.8	3579	13	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_8	12.4730264526653	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTGCCTCAGCCATTAC	-53877224	True	NA	NA	False	ATTAAA	-1	NA	53882152	53867065	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_53868863_53869981_53870146_53871231_53871497_53872383_53872525_53873031_53873128_53874210_53874365_53875947_53876081_53876619_53876714_53877213_53877388_53877646_53877752_53878356_53878468_53879938_53880110_53881978
transcript_145674.nic	chr3	-	391	2	ISM	ENSG00000113812.14	ENST00000335754.8	3579	13	-46	12873	-46	-2680	5prime_fragment	FALSE	canonical	3	129	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTCAAAAACGACCTGG	-53877270	True	NA	NA	False	ACTAAA	-2	NA	53882198	53879938	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_53880110_53881978
transcript_145675.known	chr3	-	814	6	NNC	ENSG00000113811.12	novel	1497	5	NA	NA	-77	101	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	530.64617213356	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTAGTGTCACCTTTTC	NA	False	NA	-28	True	AATAAA	-17	NA	53891962	53885199	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_53885562_53885825_53885831_53885833_53885913_53886850_53886935_53888392_53888484_53891769
transcript_145676.known	chr3	-	1497	5	FSM	ENSG00000113811.12	ENST00000495461.6	1497	5	0	0	0	0	multi-exon	FALSE	canonical	3	1194	junction_4	89.3042552177666	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATAATTCCTCTTCTGGT	-53887037	True	NA	-5	True	AATAAA	-22	NA	53891859	53884416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_53885562_53885825_53885913_53886850_53886935_53888392_53888484_53891769
transcript_145680.known	chr3	-	611	5	FSM	ENSG00000113811.12	ENST00000488746.1	611	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	562.606601009977	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAATAAGTAAATATTTT	-53887043	True	NA	-30	True	ATTAAA	-13	NA	53891865	53885300	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_53885562_53885825_53885905_53886850_53886935_53888392_53888484_53891769
transcript_145693.nnic	chr3	+	853	10	NNC	ENSG00000157445.15	novel	3661	39	NA	NA	-345814	-6402	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	29.6951590185303	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATCATTTTTCTCTTGT	54641180	True	NA	8	True	AATAAA	-11	NA	54641863	54879184	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_54641893_54642127_54642242_54752598_54752678_54764217_54764352_54816852_54816871_54837158_54837231_54838567_54838649_54846392_54846468_54871538_54871623_54879017
transcript_145696.nnic	chr3	+	758	8	NNC	ENSG00000157445.15	novel	3661	39	NA	NA	-345809	-6402	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_4	25.6109032903359	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATCATTTTTCTCTTGT	54641185	True	NA	8	True	AATAAA	-11	NA	54641868	54879184	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_54641893_54642127_54642242_54752598_54752678_54764217_54764352_54838567_54838649_54846392_54846468_54871538_54871623_54879017
transcript_145702.nnic	chr3	+	2363	4	NNC	ENSG00000157445.15	novel	3661	39	NA	NA	-345819	-119233	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	20.8326666559997	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCTTTTAAACATAAGATG	54641175	True	NA	NA	False	AATAAA	-4	NA	54641858	54766353	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_54641893_54642127_54642242_54752598_54752678_54764217
transcript_145715.known	chr3	-	3140	4	FSM	ENSG00000265992.1	ENST00000583516.1	3140	4	0	0	0	0	multi-exon	FALSE	canonical	3	1215	junction_1	2827.76900675348	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTCTCTTCATATTTGT	-54576379	True	NA	-22	True	ATTAAA	-24	NA	54639857	54632121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_54632808_54633558_54633741_54634460_54634566_54637690
transcript_145716.nnic	chr3	-	1270	4	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	canonical	3	418	junction_3	3256.49467304271	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTCTCTTCATATTTGT	-54576423	True	NA	-22	True	ATTAAA	-24	NA	54639901	54632121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_54632808_54633558_54633741_54634460_54634566_54639604
transcript_145721.nnic	chr3	-	2834	4	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	5489	junction_1	898.559711736263	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTTTCTCTTCATATTT	-54576380	True	NA	-24	True	ATTAAA	-22	NA	54639858	54632123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_54632503_54633558_54633741_54634460_54634566_54637690
transcript_145722.nnic	chr3	-	963	4	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	-44	-2	at_least_one_novel_splicesite	FALSE	canonical	3	418	junction_3	3044.87595076639	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTTTCTCTTCATATTT	-54576423	True	NA	-24	True	ATTAAA	-22	NA	54639901	54632123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_54632503_54633558_54633741_54634460_54634566_54639604
transcript_145730.nnic	chr3	-	2652	3	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	2	77	junction_1	3253	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTTTCTCTTCATATTT	-54576380	True	NA	-24	True	ATTAAA	-22	NA	54639858	54632123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_54632503_54634460_54634566_54637690
transcript_145731.nnic	chr3	-	781	3	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	-44	-2	at_least_one_novel_splicesite	FALSE	canonical	2	77	junction_1	170.5	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTTTCTCTTCATATTT	-54576423	True	NA	-24	True	ATTAAA	-22	NA	54639901	54632123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_54632503_54634460_54634566_54639604
transcript_145732.nnic	chr3	-	2957	3	NIC	ENSG00000265992.1	novel	3140	4	NA	NA	-1	-2	combination_of_known_splicesites	FALSE	canonical	2	39	junction_1	3272	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTTTCTCTTCATATTT	-54576380	True	NA	-24	True	ATTAAA	-22	NA	54639858	54632123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_54632808_54634460_54634566_54637690
transcript_145735.nic	chr3	-	3887	3	NIC	ENSG00000265992.1	novel	3140	4	NA	NA	-1	-5	intron_retention	FALSE	canonical	3	6583	junction_2	553.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATATCTTTTCTCTTCATA	-54576380	True	NA	-27	True	ATTAAA	-19	NA	54639858	54632126	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_54633741_54634460_54634566_54637690
transcript_145736.nnic	chr3	-	2016	3	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	-44	-5	intron_retention	FALSE	canonical	3	418	junction_2	3636	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATATCTTTTCTCTTCATA	-54576423	True	NA	-27	True	ATTAAA	-19	NA	54639901	54632126	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_54633741_54634460_54634566_54639604
transcript_145738.nnic	chr3	-	673	3	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	-44	-1348	at_least_one_novel_splicesite	FALSE	canonical	3	418	junction_2	3636	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGCAAGCCTAAACTTT	-54576423	True	NA	-7	True	AATAAA	-24	NA	54639901	54633469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_54633741_54634460_54634566_54639604
transcript_145746.known	chr3	-	2177	1	FSM	ENSG00000281708.1	ENST00000629461.1	2177	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAATGAAAAAGGGTATGT	NA	False	NA	NA	False	NA	NA	NA	55659382	55657205	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_55657200_55659400
transcript_145749.known	chr3	-	5600	24	FSM	ENSG00000163946.14	ENST00000493960.6	5600	24	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_7	16.7214474640506	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACAGCAAAGGCTTTACT	-56682980	False	670	NA	False	NA	NA	NA	56683017	56622737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_56623844_56624478_56624644_56624827_56625007_56627036_56627146_56627581_56627742_56628491_56628615_56633043_56633967_56638705_56638766_56639985_56640131_56641348_56641753_56646521_56647224_56648821_56648894_56648984_56649058_56660730_56660835_56660913_56661018_56662384_56662491_56663540_56663573_56666259_56666385_56668396_56668559_56669699_56669792_56670072_56670146_56671599_56671693_56673579_56673726_56682675
transcript_14575.known	chr1	-	3062	13	FSM	ENSG00000160691.19	ENST00000368453.8	3062	13	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_12	258.538990719431	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCTCTTAACCCTTC	-154969137	True	NA	-14	True	ATTAAA	-17	NA	154974376	154962297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154963932_154965542_154965782_154965945_154966081_154966161_154966232_154966318_154966518_154967670_154967798_154967979_154968032_154968203_154968258_154968494_154968615_154968770_154968835_154969377_154969449_154970031_154970200_154974247
transcript_145753.known	chr3	+	3042	18	FSM	ENSG00000180376.17	ENST00000341455.10	3042	18	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	34.3838499145761	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCTTAGTAGTAAAAAAAAAA	56552428	True	NA	8	True	AATAAA	-22	NA	56557218	56621808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_56557254_56558845_56558911_56559568_56559595_56563683_56564126_56566593_56566741_56566949_56567054_56571180_56571303_56592969_56593102_56593490_56593742_56593943_56594029_56613588_56613751_56615127_56615273_56615921_56616054_56617111_56617606_56618171_56618213_56619270_56619528_56619776_56619902_56621531
transcript_145755.known	chr3	-	8177	24	FSM	ENSG00000163946.14	ENST00000683822.1	8177	24	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	20.1930194380748	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGTCTGATGATTTCGT	-56682595	True	NA	-1	True	AATAAA	-16	NA	56683265	56620131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_56623567_56624478_56624644_56624827_56625007_56627036_56627146_56627581_56627742_56628491_56628615_56633043_56633967_56638705_56638766_56639985_56640131_56641348_56641753_56646521_56647224_56648821_56648894_56648984_56649058_56660730_56660835_56660913_56661018_56662384_56662491_56663540_56663573_56666259_56666385_56668396_56668559_56669699_56669792_56670072_56670146_56671599_56671693_56673579_56673726_56682675
transcript_145772.nic	chr3	+	1122	8	ISM	ENSG00000180376.17	ENST00000394672.8	3134	18	-12	28762	0	14	5prime_fragment	FALSE	canonical	3	113	junction_5	23.2800168314688	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGAGGAAAAAATTATATAT	56552372	True	NA	NA	False	AATAGA	-21	NA	56557162	56593075	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_56557254_56558845_56558911_56559568_56559595_56563683_56564126_56566593_56566760_56566949_56567054_56571180_56571303_56592969
transcript_145773.known	chr3	+	1983	13	FSM	ENSG00000180376.17	ENST00000422222.5	1983	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	43.4824357898936	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCAGTGTAATCAGTTCA	56552370	True	NA	NA	False	GATAAA	-36	NA	56557160	56617301	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_56557254_56558845_56558911_56559568_56559595_56563683_56564126_56566593_56566760_56566949_56567054_56571180_56571303_56593490_56593742_56593943_56594029_56613588_56613751_56615127_56615273_56615921_56616054_56617111
transcript_145781.known	chr3	-	3639	13	FSM	ENSG00000163947.12	ENST00000338458.8	3639	13	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_12	4.96865172858795	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATGTGTACAGTGTTTG	-57078879	True	NA	-4	True	AATAAA	-19	NA	57079308	56727417	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_56729623_56732237_56732425_56737184_56737356_56745204_56745463_56751055_56751133_56751299_56751397_56753503_56753567_56754980_56755152_56773708_56773817_56882291_56882355_56958822_56958890_57035087_57035177_57079225
transcript_145787.known	chr3	-	3582	10	FSM	ENSG00000163947.12	ENST00000296315.8	3582	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	6.32065006814573	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCATGTGTACAGTGTT	-56801808	True	NA	-6	True	AATAAA	-17	NA	56801949	56727419	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_56729623_56732237_56732425_56737184_56737356_56745204_56745463_56751055_56751133_56751299_56751397_56753503_56753567_56754980_56755152_56773708_56773817_56801702
transcript_145788.known	chr3	-	2024	9	FSM	ENSG00000163947.12	ENST00000495373.5	2024	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	6.59426834455499	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGGAATAGGAAGGGAT	-56801808	True	NA	0	True	GATAAA	-43	NA	56801949	56731592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_56732425_56737184_56737356_56745204_56745463_56751055_56751133_56751299_56751397_56753503_56753567_56754980_56755152_56773708_56773817_56801702
transcript_145790.known	chr3	+	2190	2	FSM	ENSG00000186451.2	ENST00000334325.2	2190	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGGCTAAGACATGTGT	57060624	True	NA	NA	False	AATAAA	-15	NA	57060663	57075432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_57060787_57073365
transcript_145791.nnic	chr3	-	6627	14	NNC	ENSG00000144730.19	novel	8698	13	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.8439522378715	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTAGTGGCTCATTTTT	-57158346	True	NA	-24	True	AATAAA	-15	NA	57165405	57089981	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_57090452_57092574_57096506_57097595_57098539_57101178_57101364_57102478_57102590_57103090_57103146_57104341_57104408_57105856_57106009_57106109_57106155_57109536_57109658_57110192_57110312_57114691_57114818_57120255_57120314_57165160
transcript_145793.known	chr3	-	8698	13	FSM	ENSG00000144730.19	ENST00000296318.12	8698	13	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_3	9.17840157955379	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTAGTGGCTCATTTTT	-57158294	True	NA	-24	True	AATAAA	-15	NA	57165353	57089981	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_57096506_57097595_57098539_57101178_57101364_57102478_57102590_57103090_57103146_57104341_57104408_57105856_57106009_57106109_57106155_57109536_57109658_57110192_57110312_57114691_57114818_57120255_57120314_57165160
transcript_145811.nic	chr3	-	2376	5	NIC	ENSG00000163666.10	novel	1308	7	NA	NA	-38	0	intron_retention	FALSE	canonical	3	19	junction_4	42.9330874734161	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGAGTTGTTTTCATTAG	-57227429	True	NA	NA	False	AGTAAA	-19	NA	57227644	57197837	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_57198296_57198390_57198493_57198752_57198953_57199761_57200029_57226295
transcript_145817.known	chr3	+	6069	22	FSM	ENSG00000157500.12	ENST00000288266.8	6069	22	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_8	24.1588657360149	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGATACTCTGAACTTT	57222697	True	NA	31	True	AATAAA	-35	NA	57227728	57273471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_57227938_57235565_57235665_57237491_57237552_57238044_57238117_57240464_57240553_57242100_57242143_57242855_57242915_57246075_57246223_57247394_57247478_57248192_57248352_57249359_57249549_57252268_57252312_57253681_57253739_57256956_57257052_57257245_57257429_57259027_57259081_57259844_57260020_57260116_57260154_57260627_57260775_57267741_57267793_57268397_57268488_57269540
transcript_145824.nic	chr3	+	2080	21	ISM	ENSG00000157500.12	ENST00000288266.8	6069	22	-1	5043	-1	407	5prime_fragment	FALSE	canonical	3	184	junction_8	24.3964649078509	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGAGAGAGTAAAAGAGAAG	57222696	True	NA	-42	True	AAAAAG	-4	NA	57227727	57268428	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_57227938_57235565_57235665_57237491_57237552_57238044_57238117_57240464_57240553_57242100_57242143_57242855_57242915_57246075_57246223_57247394_57247478_57248192_57248352_57249359_57249549_57252268_57252312_57253681_57253739_57256956_57257052_57257245_57257429_57259027_57259081_57259844_57260020_57260116_57260154_57260627_57260775_57267741_57267793_57268397
transcript_145826.known	chr3	+	2217	20	FSM	ENSG00000157500.12	ENST00000482800.5	2217	20	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_8	25.010247207374	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCGGAGGTTGCAATGAGCC	57222757	True	NA	NA	False	NA	NA	NA	57227788	57268021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_57227938_57235565_57235665_57237491_57237552_57238044_57238117_57240464_57240553_57242100_57242143_57242855_57242915_57246075_57246223_57247394_57247478_57248192_57248352_57249359_57249549_57252268_57252312_57253681_57253739_57256956_57257052_57257245_57257429_57259027_57259081_57259844_57260020_57260116_57260154_57260627_57260775_57267741
transcript_145828.nic	chr3	+	1982	19	ISM	ENSG00000157500.12	ENST00000482800.5	2217	20	-61	7263	-1	319	5prime_fragment	FALSE	canonical	3	184	junction_8	24.4626825901448	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGAGGGGGAAAAGGTAC	57222696	True	NA	4	True	NA	NA	NA	57227727	57260758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_57227938_57235565_57235665_57237491_57237552_57238044_57238117_57240464_57240553_57242100_57242143_57242855_57242915_57246075_57246223_57247394_57247478_57248192_57248352_57249359_57249549_57252268_57252312_57253681_57253739_57256956_57257052_57257245_57257429_57259027_57259081_57259844_57260020_57260116_57260154_57260627
transcript_145831.known	chr3	+	516	8	FSM	ENSG00000157500.12	ENST00000444459.1	516	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	115.805783930841	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAGAAAATGACA	57222842	True	NA	7	True	AATAGA	-15	NA	57227873	57242892	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_57227938_57230713_57230768_57235565_57235665_57237491_57237552_57238044_57238117_57240464_57240553_57242100_57242143_57242855
transcript_145832.nic	chr3	+	608	7	ISM	ENSG00000157500.12	ENST00000482800.5	2217	20	-61	25129	-1	0	5prime_fragment	FALSE	canonical	3	236	junction_2	13.8283123417944	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAGAAAATGACA	57222696	True	NA	7	True	AATAGA	-15	NA	57227727	57242892	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_57227938_57235565_57235665_57237491_57237552_57238044_57238117_57240464_57240553_57242100_57242143_57242855
transcript_145834.nic	chr3	+	345	3	ISM	ENSG00000157500.12	ENST00000468342.1	419	4	-111	678	-1	-678	5prime_fragment	FALSE	canonical	3	236	junction_2	5.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTTAAAAGAATATGAAAA	57222696	True	NA	NA	False	AATGAA	-31	NA	57227727	57237527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_57227938_57235565_57235665_57237491
transcript_145838.known	chr3	+	8780	3	FSM	ENSG00000174840.9	ENST00000311180.9	8780	3	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	5.5	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTGCCTTTTCAGGACC	57553237	True	NA	NA	False	AATAAA	-19	NA	57556273	57566848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_57557688_57559309_57559389_57559561
transcript_145844.known	chr3	-	1596	6	FSM	ENSG00000168374.11	ENST00000303436.11	1596	6	0	0	0	0	multi-exon	TRUE	canonical	3	1709	junction_2	87.9477117382823	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTGTTCTTTTTGAG	-57579694	True	NA	NA	False	AATAAA	-17	NA	57597344	57571362	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_57572299_57575547_57575674_57577315_57577388_57583897_57584008_57584383_57584465_57597073
transcript_145846.known	chr3	-	1601	6	FSM	ENSG00000168374.11	ENST00000486310.5	1601	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	727.466012951808	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATTTGGAATTATTCCT	-57579716	True	NA	NA	False	AATACA	-12	NA	57597366	57571404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_57572299_57575547_57575674_57577315_57577388_57583897_57584033_57584383_57584465_57597073
transcript_145851.nnic	chr3	-	3687	21	NNC	ENSG00000174839.13	novel	4646	20	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	13.9078215404139	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGATATTTTGTGTTATT	-57691277	True	NA	0	True	ATTAAA	-20	NA	57693106	57625453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_57626450_57627437_57628346_57628810_57628886_57630420_57630524_57630714_57630825_57630924_57630979_57633264_57633355_57634557_57634623_57634703_57634770_57641652_57641748_57645660_57645757_57646315_57646439_57657679_57657736_57659117_57659181_57660759_57660840_57661445_57661552_57663635_57663717_57666122_57666236_57672255_57672299_57672399_57672439_57692781
transcript_145852.nnic	chr3	-	3698	21	NNC	ENSG00000174839.13	novel	4646	20	NA	NA	-29	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.0139216495598	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTGGATATTTTGTGTT	-57691277	True	NA	-3	True	ATTAAA	-17	NA	57693106	57625456	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_57626464_57627437_57628346_57628810_57628886_57630420_57630524_57630714_57630825_57630924_57630979_57633264_57633355_57634557_57634623_57634703_57634770_57641652_57641748_57645660_57645757_57646315_57646439_57657679_57657736_57659117_57659181_57660759_57660840_57661445_57661552_57663635_57663717_57666122_57666236_57672255_57672299_57672399_57672439_57692781
transcript_145856.known	chr3	-	4646	20	FSM	ENSG00000174839.13	ENST00000311128.10	4646	20	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_2	12.5112691584698	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGATATTTTGTGTTATT	-57691248	True	NA	0	True	ATTAAA	-20	NA	57693077	57625453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_57628346_57628810_57628886_57630420_57630524_57630714_57630825_57630924_57630979_57633264_57633355_57634557_57634623_57634703_57634770_57641652_57641748_57645660_57645757_57646315_57646439_57657679_57657736_57659117_57659181_57660759_57660840_57661445_57661552_57663635_57663717_57666122_57666236_57672255_57672299_57672399_57672439_57692781
transcript_145857.known	chr3	+	6381	25	FSM	ENSG00000163681.16	ENST00000671191.1	6381	25	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_13	44.8587288669168	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTCAGAATTTCTGTGTA	57751170	True	NA	3	True	ATTAAA	-18	NA	57756308	57930003	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_57756343_57756547_57757850_57831382_57831531_57841298_57841372_57847196_57847234_57849753_57849817_57857732_57857829_57858087_57858160_57860698_57860840_57861948_57862087_57864547_57864717_57864806_57864858_57865241_57865293_57871635_57871699_57890040_57890101_57896510_57896592_57896872_57896933_57907883_57908007_57909075_57909151_57912380_57912702_57913157_57913276_57916905_57917078_57922888_57923024_57925844_57925935_57927295
transcript_145865.known	chr3	+	6240	23	FSM	ENSG00000163681.16	ENST00000659705.1	6240	23	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_22	50.4278389597329	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTCAGAATTTCTGTGTA	57751170	True	NA	3	True	ATTAAA	-18	NA	57756308	57930003	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_57756343_57756547_57757850_57831382_57831531_57841298_57841372_57847196_57847234_57849753_57849817_57857732_57857829_57858087_57858160_57860698_57860840_57861948_57862087_57864547_57864717_57864806_57864858_57871635_57871699_57890040_57890101_57896510_57896592_57896872_57896933_57907883_57908007_57909075_57909151_57912380_57912702_57913157_57913276_57916905_57917078_57922888_57923024_57927295
transcript_145877.known	chr3	+	5433	22	FSM	ENSG00000163681.16	ENST00000295951.7	5433	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	56.1863194588422	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCATGTTTGAGTTGAATAT	57751091	True	NA	18	True	AATAAA	-19	NA	57756229	57929168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_57756343_57756547_57757850_57831382_57831531_57841298_57841372_57847196_57847234_57849753_57849817_57857732_57857829_57858087_57858160_57860698_57860840_57861948_57862087_57864547_57864717_57871635_57871699_57890040_57890101_57896510_57896592_57896872_57896933_57907883_57908007_57909075_57909151_57912380_57912702_57913157_57913276_57916905_57917078_57922888_57923024_57927295
transcript_145885.known	chr3	+	9441	46	FSM	ENSG00000136068.16	ENST00000295956.9	9441	46	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_15	82.4363458136707	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTGTTCTTGGA	58004045	True	NA	17	True	AATAAA	-17	NA	58008421	58172251	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_58008857_58077045_58077295_58078716_58078815_58081628_58081777_58094835_58094955_58096140_58096219_58097814_58097978_58098710_58098909_58102202_58102341_58103958_58104086_58105079_58105217_58106679_58106874_58108457_58108572_58109178_58109323_58109575_58109700_58110009_58110171_58111790_58111882_58112148_58112319_58118871_58118990_58121240_58121504_58123092_58123691_58124331_58124506_58125580_58125744_58126601_58126763_58130740_58130909_58132807_58132932_58134615_58134773_58135978_58136169_58138281_58138530_58141857_58141930_58142649_58142753_58143472_58143614_58145920_58146050_58146819_58146994_58148205_58148365_58148648_58148853_58149849_58150003_58150104_58150228_58153374_58153642_58154790_58154929_58155959_58156076_58159553_58159687_58163153_58163331_58168439_58168659_58169589_58169794_58170574
transcript_145888.known	chr3	+	2527	11	FSM	ENSG00000136068.16	ENST00000682987.1	2527	11	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_4	20.8221036401224	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGTAATAGCAATAAGCAAA	58004045	True	NA	NA	False	NA	NA	NA	58008421	58105853	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_58008857_58077045_58077295_58078716_58078815_58081628_58081777_58094835_58094955_58096140_58096219_58097814_58097978_58098710_58098909_58102202_58102341_58103958_58104086_58105079
transcript_145892.known	chr3	+	8079	47	FSM	ENSG00000136068.16	ENST00000490882.5	8079	47	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_25	96.9641837487261	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCTGGAGAGAGTTCTT	58004023	True	NA	26	True	AAAACA	-9	NA	58008399	58170774	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_58008857_58077045_58077295_58078716_58078815_58081628_58081777_58094835_58094955_58096140_58096219_58097814_58097978_58098710_58098909_58102202_58102341_58103958_58104086_58105079_58105217_58106679_58106874_58108457_58108572_58109178_58109323_58109575_58109700_58110009_58110171_58111790_58111882_58112148_58112319_58118871_58118990_58121240_58121504_58123092_58123691_58124331_58124506_58125580_58125744_58126601_58126763_58130740_58130909_58131926_58132020_58132807_58132932_58134615_58134773_58135978_58136169_58138281_58138530_58141857_58141930_58142649_58142753_58143472_58143614_58145920_58146050_58146819_58146994_58148205_58148365_58148648_58148853_58149849_58150003_58150104_58150228_58153374_58153642_58154790_58154929_58155959_58156076_58159553_58159687_58163153_58163331_58168439_58168659_58169589_58169794_58170574
transcript_145895.known	chr3	+	2198	10	FSM	ENSG00000163686.15	ENST00000478253.6	2198	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	21.1122806693575	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGGTGGTTTCTATTT	58237438	True	NA	12	True	AATAAA	-23	NA	58237791	58294734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_58237917_58249877_58249943_58256561_58256706_58267188_58267346_58269320_58269435_58270931_58271065_58274657_58274816_58285084_58285140_58285352_58285454_58293588
transcript_145900.known	chr3	+	2393	9	FSM	ENSG00000163686.15	ENST00000295962.8	2393	9	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	14.9242880902239	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGGTGGTTTCTATTT	58237400	True	NA	12	True	AATAAA	-23	NA	58237531	58294734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_58237917_58256561_58256706_58267188_58267346_58269320_58269435_58270931_58271065_58274657_58274816_58285084_58285140_58285352_58285454_58293588
transcript_145902.nnic	chr3	+	2265	8	NIC	ENSG00000163686.15	novel	2393	9	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	23.4485977127392	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGGTGGTTTCTATTT	58237384	True	NA	12	True	AATAAA	-23	NA	58237515	58294734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_58237917_58267188_58267346_58269320_58269435_58270931_58271065_58274657_58274816_58285084_58285140_58285352_58285454_58293588
transcript_145910.known	chr3	+	805	6	FSM	ENSG00000163684.12	ENST00000466547.1	805	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	98.2710537238713	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTCAGAATTAACAGGGGA	58304751	False	NA	NA	False	NA	NA	NA	58306309	58317778	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_58306418_58310289_58310407_58310506_58310592_58316514_58316592_58316914_58316994_58317439
transcript_145912.known	chr3	+	7985	6	FSM	ENSG00000163684.12	ENST00000445193.7	7985	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	80.7053901545615	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTAGGAAACACTGAGTT	58304703	True	NA	NA	False	AATAAA	-26	NA	58306261	58324695	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_58306652_58310308_58310407_58310506_58310592_58316514_58316592_58316914_58316994_58317439
transcript_145914.known	chr3	+	1378	5	FSM	ENSG00000255154.9	ENST00000481972.5	1378	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	86.4363927984041	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGTGAAACCCCATCTCT	58304755	False	NA	NA	False	NA	NA	NA	58306313	58318472	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_58306418_58310506_58310592_58316514_58316592_58316914_58316994_58317439
transcript_145916.known	chr3	+	3127	5	FSM	ENSG00000255154.9	ENST00000461393.7	3127	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	93.7879923017867	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGTTGATATTTGGATT	58305568	True	NA	8	True	NA	NA	NA	58306519	58320193	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_58306652_58310506_58310592_58316514_58316592_58316914_58316994_58317439
transcript_145918.known	chr3	+	847	5	FSM	ENSG00000255154.9	ENST00000476007.2	847	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	109.792987025584	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAAACACACCAAGTTTG	58307733	False	NA	NA	False	AATGAA	-6	NA	58307762	58317828	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_58307980_58310506_58310592_58316514_58316592_58316914_58316994_58317439
transcript_145921.known	chr3	+	3001	18	FSM	ENSG00000168297.16	ENST00000356151.7	3001	18	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_16	15.349898278576	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTCTCTTATTCTTTTG	58332355	True	NA	118	True	AATAGA	-32	NA	58332891	58426127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_58333091_58365873_58365925_58369430_58369479_58382513_58382701_58390581_58390660_58391146_58391221_58391772_58391848_58394997_58395103_58395657_58395760_58397038_58397201_58397604_58397723_58399298_58399378_58403861_58403911_58408923_58409002_58409531_58409619_58410089_58410160_58412900_58412964_58424751
transcript_145924.known	chr3	+	1974	17	FSM	ENSG00000168297.16	ENST00000302779.9	1974	17	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_16	17.9564359979925	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCCTTAAGATCTTGCT	58332343	True	NA	NA	False	AATAAA	-14	NA	58332879	58425151	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_58333091_58365873_58365925_58369430_58369479_58382513_58382701_58390581_58390660_58391146_58391221_58391772_58391848_58394997_58395103_58395657_58395760_58397038_58397201_58397604_58397723_58399298_58399378_58403861_58403911_58408923_58409002_58409531_58409619_58410089_58410160_58424751
transcript_145928.nic	chr3	+	1490	15	ISM	ENSG00000168297.16	ENST00000484288.5	2031	18	-33	11358	-2	-4925	5prime_fragment	FALSE	canonical	3	54	junction_1	10.9609697172676	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTTAGCTCGAAAGGTAA	58332341	True	NA	NA	False	AAAAAG	-4	NA	58332877	58409602	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_58333091_58365873_58365925_58369430_58369479_58382513_58382701_58390581_58390660_58391146_58391221_58391772_58391848_58394997_58395103_58395657_58395760_58397038_58397201_58397604_58397723_58399298_58399378_58403861_58403911_58408923_58409002_58409531
transcript_145929.known	chr3	-	1507	10	FSM	ENSG00000168291.13	ENST00000302746.11	1507	10	0	0	0	0	multi-exon	FALSE	canonical	3	2088	junction_9	100.871143813883	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATTTTTTTTTTTTTGAG	-58428250	True	NA	-2	True	AATAAA	-17	NA	58433832	58427629	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_58428180_58428472_58428615_58429707_58429800_58430127_58430239_58430656_58430943_58431592_58431629_58431730_58431794_58431876_58431985_58433630_58433685_58433767
transcript_145936.known	chr3	-	1478	9	FSM	ENSG00000168291.13	ENST00000383714.8	1478	9	0	0	0	0	multi-exon	FALSE	canonical	1	24	junction_8	759.612719992892	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATTTTTTTTTTTTTGAG	-58428275	True	NA	-2	True	AATAAA	-17	NA	58433857	58427629	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_58428180_58428472_58428615_58429707_58429800_58430127_58430239_58430656_58430943_58431592_58431629_58431730_58431794_58431876_58431985_58433767
transcript_145937.known	chr3	-	1535	9	FSM	ENSG00000168291.13	ENST00000461692.5	1535	9	0	0	0	0	multi-exon	FALSE	canonical	3	2161	junction_3	74.7544940120659	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATATAATATACATTTACT	-58428257	True	NA	-23	True	ATTAAA	-1	NA	58433839	58427691	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_58428180_58428472_58428615_58429707_58429800_58430127_58430239_58430656_58430943_58431592_58431629_58431730_58431794_58431876_58431985_58433630
transcript_145938.known	chr3	+	1759	4	FSM	ENSG00000168301.13	ENST00000490264.1	1759	4	0	0	0	0	multi-exon	TRUE	canonical	3	3	junction_1	51.6999892542435	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAACTAATAAAAAATGAA	58490617	True	NA	-15	True	NA	NA	NA	58492118	58502327	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_58492170_58494152_58494409_58498712_58498783_58500945
transcript_145939.known	chr3	+	1555	3	FSM	ENSG00000168301.13	ENST00000404589.8	1555	3	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	15.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTTTGTATTTATTGAT	58490594	True	NA	14	True	AATAAA	-17	NA	58492095	58502356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_58492170_58498712_58498783_58500945
transcript_145940.known	chr3	-	1072	6	FSM	ENSG00000168306.13	ENST00000467738.1	1072	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.2687759489278	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATGTTTTAGAGTCAT	-58526667	False	NA	-5	True	ATTAAA	-14	NA	58526749	58505135	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_58505287_58508892_58509026_58517205_58517424_58522495_58522602_58524425_58524606_58526465
transcript_145941.known	chr3	-	1432	4	FSM	ENSG00000168309.18	ENST00000447756.2	1432	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACAGCTTCTAACTCAAT	-58587061	True	NA	NA	False	CATAAA	-20	NA	58587113	58565851	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_58566696_58567207_58567365_58569690_58569866_58586857
transcript_145942.known	chr3	-	3314	17	FSM	ENSG00000163689.21	ENST00000482387.7	3291	17	-25	2	-18	-2	multi-exon	FALSE	canonical	3	11	junction_4	15.515617132425	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGCTTTTAAACTGCTTC	-59049500	True	NA	-10	True	AATAAA	-17	NA	59050050	58742009	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_58742573_58753768_58753864_58806394_58806457_58831685_58831890_58849031_58849410_58863557_58863893_58866565_58866689_58867816_58867937_58869327_58869491_58870172_58870310_58884544_58884710_58913707_58913865_58937647_58937763_59039556_59039630_59046228_59046323_59047164_59047255_59049610
transcript_145950.nic	chr3	-	1209	6	ISM	ENSG00000163689.21	ENST00000479931.5	949	8	-325	26156	0	68	5prime_fragment	FALSE	canonical	3	39	junction_1	11.2178429299041	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGGTTGTTTTCTTT	-59049534	True	NA	NA	False	AAAAAG	-13	NA	59050084	58913501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_58913865_58937647_58937763_59039556_59039630_59046228_59046323_59047164_59047255_59049610
transcript_145956.known	chr3	-	1033	10	FSM	ENSG00000189283.10	ENST00000476844.5	1033	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	13.0393516463828	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTCTCGGTGTATTG	-61250654	True	NA	2	True	ATTAAA	-19	NA	61251413	59749309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_59749569_59752220_59752322_59922345_59922415_60011370_60011401_60014006_60014153_60536859_60536980_60821918_60822012_61042046_61042100_61200616_61200666_61251300
transcript_145959.known	chr3	+	2694	2	FSM	ENSG00000144724.20	ENST00000475527.1	2694	2	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGACAGATATCAACTGAT	61561840	False	NA	39	True	AGTAAA	-13	NA	61561850	61751049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_61562373_61748877
transcript_145961.known	chr3	-	652	1	FSM	ENSG00000226360.5	ENST00000472730.1	652	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCACATTTGAATAAATTCT	-61741834	False	NA	NA	False	NA	NA	NA	61743106	61742454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_61742500_61743100
transcript_145965.known	chr3	+	3369	6	FSM	ENSG00000114405.11	ENST00000462069.6	3369	6	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	31.2499599999744	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTCACTTCTGAGATAA	62318108	True	NA	NA	False	ATTAAA	-16	NA	62319021	62336213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_62319056_62319720_62319833_62320459_62320525_62321929_62322054_62331324_62331400_62333254
transcript_145966.known	chr3	+	3525	6	FSM	ENSG00000114405.11	ENST00000494481.5	3525	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	78.0579272079396	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTCACTTCTGAGATAA	62318129	True	NA	NA	False	ATTAAA	-16	NA	62319042	62336213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_62319233_62319720_62319833_62320459_62320525_62321929_62322054_62331324_62331400_62333254
transcript_145967.known	chr3	+	582	5	FSM	ENSG00000114405.11	ENST00000486169.5	582	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	76.3098126062435	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTACACTTGGGGAGG	62318101	True	NA	NA	False	AATAAA	-40	NA	62319014	62324133	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_62319056_62319720_62319833_62320459_62320525_62321929_62322054_62323893
transcript_145968.known	chr3	+	768	5	FSM	ENSG00000114405.11	ENST00000542214.2	768	5	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_2	7.08872343937891	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGTCAGTGTTGTGAGT	62318807	False	NA	12	True	ATTAAA	-24	NA	62319720	62333646	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_62319833_62320459_62320525_62321929_62322054_62331324_62331400_62333254
transcript_145969.known	chr3	-	5455	28	FSM	ENSG00000163618.18	ENST00000612439.4	5455	28	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_14	5.15547041223861	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTGGGTCTGTCTTCCTC	-62875069	True	NA	NA	False	AATAAA	-24	NA	62875389	62398345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_62399586_62403080_62403186_62438103_62438212_62445764_62445798_62465366_62465451_62466338_62466414_62474172_62474321_62478260_62478417_62491338_62491481_62492289_62492447_62499161_62499269_62516058_62516183_62516579_62516644_62518148_62518251_62530653_62530813_62532870_62533059_62536444_62536582_62549902_62550116_62557404_62557514_62570871_62570939_62585184_62585325_62592636_62592749_62645721_62645844_62650846_62651081_62662313_62662395_62753440_62753774_62765870_62765985_62874588
transcript_145990.nic	chr3	+	2097	2	ISM	ENSG00000163630.11	ENST00000450542.6	1004	5	-10	335007	0	-276120	5prime_fragment	FALSE	canonical	2	3	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTTTTTACCTCAAC	63278237	True	NA	NA	False	NA	NA	NA	63278307	63280529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_63278552_63278676
transcript_145991.nnic	chr3	-	966	4	NNC	ENSG00000241359.1	novel	558	5	NA	NA	-95549	515	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_1	6.84754619472471	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGCACTTTTATTCCA	-63645089	True	NA	-1	True	AATAAA	-14	NA	63645600	63423080	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_63423766_63426685_63426807_63549977_63550052_63645514
transcript_145992.known	chr3	+	3367	12	FSM	ENSG00000163635.20	ENST00000474112.5	3367	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	6.42952898548615	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGTTCACGGCCGTAT	63864509	False	NA	NA	False	NA	NA	NA	63864556	63996636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_63865000_63898398_63898498_63912587_63912924_63913156_63913226_63952378_63952484_63979914_63980168_63982185_63982446_63982938_63983022_63988058_63988325_63990175_63990375_63990737_63990860_63995504
transcript_145996.known	chr3	-	836	7	FSM	ENSG00000163634.12	ENST00000469584.5	836	7	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_6	203.694556191917	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTTTGTGCTCATTAAT	-63856024	True	NA	-3	True	AATAAA	-16	NA	63863868	63833870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_63834200_63835153_63835224_63835323_63835391_63836300_63836359_63837975_63838063_63838371_63838500_63863771
transcript_145998.known	chr3	-	738	6	FSM	ENSG00000163634.12	ENST00000498422.5	738	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	250.94493419872	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTATTCGCATATATATT	-63863721	False	NA	NA	False	ATTAAA	-16	NA	63863786	63835326	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_63835391_63836300_63836359_63837975_63838063_63838371_63838500_63839655_63839774_63863503
transcript_145999.known	chr3	-	892	8	FSM	ENSG00000163634.12	ENST00000295899.10	892	8	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_7	78.2632918879781	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTGTGCTCATTAATA	-63855961	True	NA	-2	True	AATAAA	-17	NA	63863805	63833869	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_63834200_63835153_63835224_63835323_63835391_63836300_63836359_63837975_63838063_63838371_63838500_63839655_63839774_63863771
transcript_146.known	SIRV5	+	2085	17	FSM	SIRV5A	SIRV508	2085	17	0	0	0	0	multi-exon	FALSE	canonical	3	2722	junction_10	3161.7140914532	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1008	10991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
transcript_146000.known	chr3	-	1495	9	FSM	ENSG00000163636.11	ENST00000492933.5	1495	9	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_7	516.8353068193	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCATTTATTTTTTTCTT	-64010305	True	NA	-20	True	AATAAA	-18	NA	64023472	64010554	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_64010765_64010877_64010956_64013438_64013608_64018598_64018708_64018817_64019038_64019295_64019442_64022317_64022524_64022642_64022802_64023274
transcript_146003.known	chr3	-	1362	8	FSM	ENSG00000163636.11	ENST00000295901.9	1362	8	0	0	0	0	multi-exon	FALSE	canonical	3	981	junction_7	107.470546510879	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTATTTTTTTCTTAAAC	-64010327	True	NA	-16	True	AATAAA	-22	NA	64023494	64010550	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_64010765_64010877_64010956_64013438_64013608_64018598_64018708_64018817_64019038_64019295_64019442_64022317_64022524_64023274
transcript_146004.known	chr3	-	1176	8	FSM	ENSG00000163636.11	ENST00000482510.5	1176	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	438.807753917315	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTATAAAATAAATACTGCAT	-64010291	True	NA	-49	True	NA	NA	NA	64023458	64010583	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_64010765_64010877_64010956_64013438_64013608_64018598_64018708_64018817_64019038_64019295_64019442_64022317_64022524_64023391
transcript_146009.known	chr3	-	2052	7	FSM	ENSG00000163636.11	ENST00000476464.5	2052	7	0	0	0	0	multi-exon	FALSE	canonical	3	1169	junction_5	51.1750807414008	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCATTTATTTTTTTCTT	-64010270	True	NA	-20	True	AATAAA	-18	NA	64023437	64010554	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_64010765_64010877_64010956_64013438_64013608_64018598_64018708_64018817_64019038_64019295_64019442_64022317
transcript_146043.nic	chr3	-	1688	5	ISM	ENSG00000151276.24	ENST00000460329.6	3694	22	-328	91717	-328	0	5prime_fragment	TRUE	canonical	0	0	junction_4	52.3133587145769	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAACAGAGCTAGTGTGT	NA	False	NA	NA	False	AATGAA	-13	NA	65598214	65452581	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_65453341_65470282_65470485_65478591_65478799_65493511_65493632_65597814
transcript_146045.known	chr3	-	2247	6	FSM	ENSG00000151276.24	ENST00000464060.5	2247	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	38.5050646019455	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAACAGAGCTAGTGTGT	-66034371	True	NA	NA	False	AATGAA	-13	NA	66038834	65452581	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_65453341_65470282_65470488_65478591_65478799_65493511_65493632_65621971_65622089_66037995
transcript_146048.nic	chr3	+	1132	10	NIC	ENSG00000144741.19	novel	1023	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_5	117.474767450948	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAGGCCTTTTAGAGCT	66217975	True	NA	9	True	AATAAA	-18	NA	66220987	66378079	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_66221128_66243202_66243313_66262050_66262156_66263331_66263380_66304452_66304538_66346363_66346409_66362859_66362930_66369477_66369543_66370528_66370603_66377689
transcript_146050.known	chr3	+	2035	10	FSM	ENSG00000144741.19	ENST00000354883.11	2035	10	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	67.0571895225759	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATACTCCCTCTTTCACA	66217988	True	NA	97	True	AATAAA	-18	NA	66221000	66378923	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_66221128_66236543_66236701_66243202_66243313_66262050_66262156_66263331_66263380_66346363_66346409_66362859_66362930_66369477_66369543_66370528_66370603_66377689
transcript_146052.known	chr3	+	1023	9	FSM	ENSG00000144741.19	ENST00000336733.10	1023	9	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	46.2817458616245	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAGGCCTTTTAGAGCT	66217999	True	NA	9	True	AATAAA	-18	NA	66221011	66378079	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_66221128_66243202_66243313_66262050_66262156_66263331_66263380_66346363_66346409_66362859_66362930_66369477_66369543_66370528_66370603_66377689
transcript_146057.nnic	chr3	+	1086	8	NIC	ENSG00000144741.19	novel	2035	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_5	108.972379949402	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAGGCCTTTTAGAGCT	66217978	True	NA	9	True	AATAAA	-18	NA	66220990	66378079	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_66221128_66236543_66236701_66243202_66243313_66262050_66262156_66263331_66263380_66369477_66369543_66370528_66370603_66377689
transcript_146059.nnic	chr3	+	932	7	FSM	ENSG00000144741.19	ENST00000686445.1	1751	7	-4	823	-1	0	multi-exon	FALSE	canonical	3	20	junction_4	109.272976226208	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAGGCCTTTTAGAGCT	66217975	True	NA	9	True	AATAAA	-18	NA	66220987	66378079	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_66221128_66243202_66243313_66262050_66262156_66263331_66263380_66369477_66369543_66370528_66370603_66377689
transcript_146069.known	chr3	-	5363	19	FSM	ENSG00000144749.14	ENST00000273261.8	5363	19	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_13	66.4379409674924	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATAGTTGGTGGTCCTTCT	-66495427	True	NA	-5	True	AATAAA	-20	NA	66501022	66378796	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_66380490_66380576_66380862_66381478_66381632_66382272_66382399_66382981_66383402_66383990_66384273_66385980_66386302_66394039_66394204_66398111_66398184_66398969_66399042_66405197_66405279_66407347_66407492_66410128_66410273_66412870_66413015_66414919_66415064_66417128_66417267_66451558_66451634_66462437_66462510_66500189
transcript_146077.nnic	chr3	-	5399	18	NIC	ENSG00000144749.14	novel	5363	19	NA	NA	-109	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_17	140.704333062492	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATAGTTGGTGGTCCTTC	NA	False	NA	-6	True	AATAAA	-19	NA	66501131	66378797	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_66380490_66380576_66380862_66381478_66381632_66382272_66382399_66382981_66383402_66383990_66384273_66385980_66386302_66394039_66394204_66398111_66398184_66398969_66399042_66405197_66405279_66407347_66407492_66410128_66410273_66412870_66413015_66414919_66415064_66417128_66417267_66451558_66451634_66500189
transcript_146078.nnic	chr3	-	5287	18	NIC	ENSG00000144749.14	novel	5363	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_16	139.044315954691	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATAGTTGGTGGTCCTTC	-66495427	True	NA	-6	True	AATAAA	-19	NA	66501022	66378797	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_66380490_66380576_66380862_66381478_66381632_66382272_66382399_66382981_66383402_66383990_66384273_66385980_66386302_66394039_66394204_66398111_66398184_66398969_66399042_66405197_66405279_66407347_66407492_66410128_66410273_66412870_66413015_66414919_66415064_66417128_66417267_66462437_66462510_66500189
transcript_146103.known	chr3	+	4680	4	FSM	ENSG00000163376.11	ENST00000417314.2	4680	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	11.1455023315337	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCAGTGTTGCAAAGTGA	66997313	True	NA	8	True	AATAAA	-19	NA	66998306	67011210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_66998372_66998980_66999192_67003194_67004310_67007921
transcript_146108.nnic	chr3	-	2909	12	NNC	ENSG00000172340.15	novel	2350	11	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_1	214.186409890586	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGATCTGTGTGTATCTC	-67647623	True	NA	-5	True	AATAAA	-18	NA	67654612	67374722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_67375860_67375942_67376506_67400730_67400852_67495797_67495941_67498133_67498296_67508806_67508904_67518246_67518337_67520481_67520635_67528131_67528223_67529086_67529187_67609454_67609597_67654502
transcript_146110.known	chr3	-	2350	11	FSM	ENSG00000172340.15	ENST00000307227.10	2350	11	0	0	0	0	multi-exon	TRUE	canonical	3	517	junction_4	46.75991873389	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGTGTGTATCTCTCAT	-67647623	True	NA	-1	True	AATAAA	-22	NA	67654612	67374718	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_67375860_67400730_67400852_67495797_67495941_67498133_67498296_67508806_67508904_67518246_67518337_67520481_67520635_67528131_67528223_67529086_67529187_67609454_67609597_67654502
transcript_146118.known	chr3	+	3894	6	FSM	ENSG00000241316.8	ENST00000656446.1	3894	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.72763633939717	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGATACATCATGTTTG	67654266	False	NA	NA	False	CATAAA	-37	NA	67654966	67753596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_67655103_67669815_67669910_67670828_67671005_67746770_67746958_67749852_67749971_67750413
transcript_146120.known	chr3	+	2715	6	FSM	ENSG00000241316.8	ENST00000659899.1	2715	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.57681974534503	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTTAAGTGACAATATCC	67654011	True	NA	NA	False	TTTAAA	-7	NA	67654711	67752215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_67655103_67669815_67669910_67670881_67671005_67746770_67746958_67749852_67749971_67750413
transcript_146122.known	chr3	+	2558	4	FSM	ENSG00000241316.8	ENST00000659205.1	2558	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.62466929133727	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATTTGGAATATATAAAGA	67654031	True	NA	NA	False	ATTAAA	-41	NA	67654731	67752295	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_67655103_67746770_67746958_67749852_67749971_67750413
transcript_146124.known	chr3	+	1320	1	FSM	ENSG00000241506.1	ENST00000478110.1	1320	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGAACCATGGCTGTCAT	68635647	False	NA	NA	False	AAGAAA	-31	NA	68635704	68637024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_68635700_68637000
transcript_146125.known	chr3	-	2229	6	FSM	ENSG00000163377.16	ENST00000295569.12	2229	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	12.5315601582564	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTTTTTGTGATTATT	-68931959	True	NA	-5	True	AGTAAA	-23	NA	68932547	68731765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_68733154_68739074_68739200_68752862_68753019_68880729_68880846_68885174_68885311_68932239
transcript_146132.known	chr3	-	4443	18	FSM	ENSG00000163378.14	ENST00000383701.8	4443	18	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_16	12.8523690813585	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAGAACCATTTTTAAGG	-69011570	True	NA	-29	True	AATAAA	-22	NA	69013684	68975224	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_68977765_68978332_68978436_68979667_68979788_68982810_68982873_68987444_68987514_68988294_68988382_68988505_68988578_68988924_68989018_68998010_68998115_69001607_69001715_69004377_69004483_69005139_69005235_69007712_69007822_69008427_69008529_69009636_69009861_69011935_69011992_69012514_69012800_69013573
transcript_146152.known	chr3	-	1931	1	FSM	ENSG00000163378.14	ENST00000615922.1	1931	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATCAGAACCATTTTTAA	-68977136	False	NA	-31	True	AATAAA	-20	NA	68977157	68975226	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_68975200_68977200
transcript_146156.known	chr3	-	2111	18	FSM	ENSG00000144744.17	ENST00000361055.9	2111	18	0	0	0	0	multi-exon	FALSE	canonical	3	658	junction_17	89.9290377681761	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTCACTGAAGTTTTT	-69071442	True	NA	-12	True	AATAAA	-16	NA	69080365	69054729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_69055526_69055850_69055906_69055999_69056064_69056182_69056284_69056611_69056694_69056778_69056816_69057255_69057310_69061813_69061928_69062076_69062180_69062981_69063138_69063438_69063504_69064067_69064112_69067927_69068009_69071534_69071618_69075429_69075511_69077797_69077919_69080111_69080154_69080333
transcript_146160.known	chr3	-	2112	17	FSM	ENSG00000144744.17	ENST00000349511.8	2112	17	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_16	210.794544150815	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTCACTGAAGTTTTT	-69071485	True	NA	-12	True	AATAAA	-16	NA	69080408	69054729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_69055526_69055850_69055906_69055999_69056064_69056182_69056284_69056611_69056694_69056778_69056816_69057255_69057310_69061813_69061928_69062076_69062180_69062981_69063138_69063438_69063504_69064067_69064112_69067927_69068009_69071534_69071618_69075429_69075511_69077797_69077919_69080333
transcript_146172.known	chr3	-	2004	16	FSM	ENSG00000144744.17	ENST00000415609.6	2004	16	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_14	299.797146232063	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTCACTGAAGTTTTT	-69071458	True	NA	-12	True	AATAAA	-16	NA	69080381	69054729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_69055526_69055850_69055906_69055999_69056064_69056182_69056284_69056611_69056694_69056778_69056816_69057255_69057310_69061813_69061928_69062076_69062180_69062981_69063138_69063438_69063504_69064067_69064112_69067927_69068009_69071534_69071618_69077797_69077919_69080333
transcript_146187.known	chr3	-	4867	17	FSM	ENSG00000144747.17	ENST00000646708.1	4867	17	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_15	24.1601913020158	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCCTGGCGTGGTGGTGT	-69049450	True	NA	NA	False	AATACA	-5	NA	69052333	69021847	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_69023321_69024054_69024181_69025559_69025713_69025995_69026098_69027899_69027993_69028225_69028296_69029814_69030008_69033547_69033705_69035022_69035116_69038563_69038721_69038842_69039010_69039550_69039694_69042806_69042913_69043749_69043877_69044491_69044596_69047348_69048563_69051944
transcript_146195.known	chr3	-	431	2	FSM	ENSG00000144744.17	ENST00000464605.1	431	2	0	0	0	0	multi-exon	FALSE	canonical	3	658	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGTTTTGTGGCCTTTT	-69071431	True	NA	NA	False	NA	NA	NA	69080354	69079743	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_69080154_69080333
transcript_146197.known	chr3	+	2134	3	FSM	ENSG00000144746.7	ENST00000273258.4	2134	3	0	0	0	0	multi-exon	FALSE	canonical	3	511	junction_2	53	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGTCTTAAATACCTGA	NA	False	NA	29	True	AATAAA	-41	NA	69084936	69106092	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_69085224_69101838_69102057_69104463
transcript_146213.nic	chr3	-	2767	21	NIC	ENSG00000114861.24	novel	5813	23	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	5.46328655664335	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACGTCAAAAGTTAGCAGTG	-71582849	True	NA	NA	False	AAAAAG	-15	NA	71583753	70959190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_70959392_70965889_70966057_70970735_70970806_70972010_70972181_70976940_70977043_70977642_70977723_70977827_70978030_70987993_70988078_71000971_71001060_71015548_71015654_71041327_71041533_71046941_71047096_71052536_71052627_71053635_71053774_71112535_71112638_71198201_71198393_71299819_71299881_71359149_71359245_71493425_71493556_71581548_71581698_71583570
transcript_146214.known	chr3	-	7140	21	NIC	ENSG00000114861.24	novel	7103	21	NA	NA	-11	-7	combination_of_known_junctions	TRUE	canonical	0	0	junction_16	4.11673414249694	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAAAAGTTGCCACAGCCT	-71583945	True	NA	NA	False	AATAAA	-23	NA	71583989	70954714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_70959392_70965889_70966057_70970735_70970806_70972010_70972181_70976940_70977043_70977642_70977723_70977827_70978030_70987993_70988078_71000971_71001060_71015548_71015654_71041327_71041533_71046941_71047096_71052536_71052627_71053635_71053774_71112535_71112638_71198201_71198393_71299819_71299881_71359149_71359245_71493425_71493556_71581548_71581698_71583909
transcript_146215.known	chr3	-	2971	21	FSM	ENSG00000114861.24	ENST00000649596.1	2971	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5.86408560646926	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTACTCCTTTTTTTTT	-71583555	False	NA	NA	False	NA	NA	NA	71583599	70958778	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_70959392_70965889_70966057_70970735_70970806_70972554_70972677_70976940_70977043_70977642_70977720_70977827_70978030_70987993_70988078_71000971_71001060_71015548_71015654_71041327_71041533_71046941_71047096_71052536_71052624_71053635_71053774_71112535_71112638_71198201_71198393_71299819_71299881_71359149_71359245_71493425_71493556_71581548_71581698_71583570
transcript_146221.nic	chr3	-	2380	18	NIC	ENSG00000114861.24	novel	5813	23	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	4.10839296240805	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACGTCAAAAGTTAGCAGTG	-71305059	True	NA	NA	False	AAAAAG	-15	NA	71306047	70959190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_70959392_70965889_70966057_70970735_70970806_70972010_70972181_70976940_70977043_70977642_70977723_70977827_70978030_70987993_70988078_71000971_71001060_71015548_71015654_71041327_71041533_71046941_71047096_71052536_71052627_71053635_71053774_71112535_71112638_71198201_71198393_71299819_71299881_71305877
transcript_146226.nic	chr3	-	2021	15	NIC	ENSG00000114861.24	novel	2149	16	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_14	3.53769785629708	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACGTCAAAAGTTAGCAGTG	-71064816	True	NA	NA	False	AAAAAG	-15	NA	71064988	70959190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_70959392_70965889_70966057_70970735_70970806_70972010_70972181_70976940_70977043_70977642_70977723_70977827_70978030_70987993_70988078_71000971_71001060_71015548_71015654_71041327_71041533_71046941_71047096_71052536_71052627_71053635_71053774_71064823
transcript_146227.known	chr3	-	1948	15	FSM	ENSG00000114861.24	ENST00000650387.1	1948	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4.18756663059996	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGGAAAAAAAAAAAAA	-71064811	True	NA	NA	False	AATGAA	-7	NA	71064983	70959210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_70959392_70965889_70966057_70970735_70970806_70972554_70972677_70976940_70977043_70977642_70977723_70977827_70978030_70987993_70988078_71000971_71001060_71015548_71015654_71041327_71041533_71046941_71047096_71052536_71052627_71053635_71053774_71064823
transcript_146233.known	chr3	-	2227	2	FSM	ENSG00000114861.24	ENST00000650231.1	2227	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATGTGAAGCTCAAAAAAA	-71582858	True	NA	NA	False	TTTAAA	-3	NA	71583762	71579662	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_71581698_71583570
transcript_146234.known	chr3	-	2149	16	FSM	ENSG00000114861.24	ENST00000648426.1	2149	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_14	3.66969571853944	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACGTCAAAAGTTAGCAGTG	NA	False	NA	NA	False	AAAAAG	-15	NA	71198392	70959190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_70959392_70965889_70966057_70970735_70970806_70972010_70972181_70976940_70977043_70977642_70977723_70977827_70978030_70987993_70988078_71000971_71001060_71015548_71015654_71041327_71041533_71046941_71047096_71052536_71052627_71053635_71053774_71112535_71112638_71198201
transcript_146235.known	chr3	-	6209	8	FSM	ENSG00000163412.13	ENST00000448225.5	6209	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	107.681882204492	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATTGAGTGTTTCTGAG	-71754348	False	NA	-28	True	ATTAAA	-34	NA	71754383	71679288	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_71684729_71690009_71690166_71693874_71693942_71696459_71696521_71699613_71699709_71710411_71710485_71728475_71728624_71754214
transcript_146236.known	chr3	-	777	8	FSM	ENSG00000163412.13	ENST00000421769.6	777	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	108.639640226629	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCACTCTGTAAAGAATTC	-71754738	False	NA	NA	False	AAAACA	-5	NA	71754773	71684681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_71684729_71690009_71690166_71693874_71693942_71696459_71696521_71699613_71699709_71710411_71710485_71728475_71728624_71754643
transcript_146239.known	chr3	-	9978	7	FSM	ENSG00000163412.13	ENST00000425534.8	9978	7	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_1	17.5119007154183	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGCTTTTCTGTCTCACT	-71722975	True	NA	NA	False	ATTAAA	-16	NA	71725402	71675413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_71684729_71690009_71690166_71693874_71693942_71696459_71696521_71699613_71699709_71710411_71710485_71725191
transcript_146241.known	chr3	+	2642	1	FSM	ENSG00000170837.3	ENST00000304411.3	2642	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTGTTTTGTTGTGGTG	71753750	True	NA	19	True	AATATA	-20	NA	71753854	71756496	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_71753900_71756500
transcript_146242.known	chr3	-	1555	4	FSM	ENSG00000163421.9	ENST00000295619.4	1555	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	1.69967317119759	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTTGTTGTCAGTTTTTAT	-71785090	False	NA	-1	True	NA	NA	NA	71785148	71771654	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_71772829_71774444_71774508_71781466_71781593_71784956
transcript_146243.known	chr3	-	2057	3	FSM	ENSG00000241163.9	ENST00000668763.1	2057	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATGTTGCAATTTTGCC	-72100852	True	NA	NA	False	ATTAAA	-25	NA	72100957	72097231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_72099012_72099903_72100011_72100787
transcript_146246.known	chr3	-	1755	8	FSM	ENSG00000241163.9	ENST00000665453.1	1755	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.41593350361254	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGGCCTTGAAATCGTC	-72100796	True	NA	-12	True	AATAAA	-24	NA	72100901	72035754	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_72036174_72036324_72036521_72055860_72055963_72059686_72060110_72060509_72060612_72060802_72061095_72099903_72100011_72100787
transcript_146247.nnic	chr3	-	2280	5	NNC	ENSG00000163602.12	novel	7215	4	NA	NA	-503	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	9.09326673973661	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTACTGTCTTGCAAAAA	-72447090	False	NA	NA	False	AGTAAA	-26	NA	72447124	72376949	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_72378638_72379039_72379139_72379250_72379428_72446495_72446622_72446934
transcript_146257.known	chr3	-	2846	11	FSM	ENSG00000144736.14	ENST00000325599.13	2846	11	0	0	0	0	multi-exon	FALSE	canonical	2	150	junction_6	14.9666295470958	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTCATGTGGACGTATGC	-72845541	True	NA	-6	True	AATAAA	-25	NA	72848445	72749276	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_72750837_72792915_72793037_72812670_72812795_72815349_72815404_72817229_72817385_72824423_72824552_72832368_72832482_72841044_72841200_72842279_72842403_72844358_72844424_72848197
transcript_146261.nic	chr3	-	1807	9	NIC	ENSG00000144736.14	novel	502	5	NA	NA	-8	672	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	56.4068646088399	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGAGAGGAAACTGAACAT	-72845576	True	NA	NA	False	AAAAAG	-6	NA	72848480	72813824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_72814556_72815349_72815404_72817229_72817385_72824423_72824552_72832368_72832482_72841044_72841200_72842279_72842403_72844358_72844424_72848197
transcript_146267.known	chr3	-	2844	11	FSM	ENSG00000144736.14	ENST00000444040.6	2844	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	53.9762910915524	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTTCATGTGGACGTAT	-72845511	True	NA	-8	True	AATAAA	-23	NA	72848415	72749278	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_72750837_72792915_72793037_72812670_72812795_72815349_72815404_72817229_72817385_72824423_72824552_72832368_72832482_72841044_72841200_72842279_72842403_72844358_72844454_72848197
transcript_146273.known	chr3	+	4957	9	FSM	ENSG00000163605.15	ENST00000356692.10	4957	9	0	0	0	0	multi-exon	FALSE	canonical	3	759	junction_7	34.8568501158667	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTATGTGTGTAATTATT	72977829	True	NA	12	True	AATAAA	-16	NA	72996810	73069198	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_72997072_72998076_72998159_73047185_73047357_73059036_73059131_73061022_73061061_73063672_73063748_73064002_73064147_73064851_73065142_73065396
transcript_146278.nic	chr3	+	1193	8	ISM	ENSG00000163605.15	ENST00000356692.10	4957	9	-38	4057	-30	-149	5prime_fragment	FALSE	canonical	3	759	junction_7	37.0438240191153	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTAGAGACCATCTGTA	NA	False	NA	71	True	NA	NA	NA	72996772	73065141	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_72997072_72998076_72998159_73047185_73047357_73059036_73059131_73061022_73061061_73063672_73063748_73064002_73064147_73064851
transcript_146279.nic	chr3	+	1501	8	ISM	ENSG00000163605.15	ENST00000356692.10	4957	9	-38	3749	-30	159	intron_retention	FALSE	canonical	3	759	junction_7	37.0438240191153	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCTGATGATGCCTTAAC	NA	False	NA	48	True	AAGAAA	-14	NA	72996772	73065449	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_72997072_72998076_72998159_73047185_73047357_73059036_73059131_73061022_73061061_73063672_73063748_73064002_73064147_73064851
transcript_146287.nic	chr3	+	885	7	ISM	ENSG00000163605.15	ENST00000356692.10	4957	9	-38	5070	-30	-838	5prime_fragment	FALSE	canonical	3	784	junction_2	29.3905691601159	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGGAGAAAAATCACAGGT	NA	False	NA	5	True	NA	NA	NA	72996772	73064128	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_72997072_72998076_72998159_73047185_73047357_73059036_73059131_73061022_73061061_73063672_73063748_73064002
transcript_146291.known	chr3	+	1033	5	FSM	ENSG00000163605.15	ENST00000470976.1	1033	5	0	0	0	0	multi-exon	FALSE	canonical	3	784	junction_2	31.5941054628866	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATATAGCAAAGTAAGAAT	72977836	True	NA	NA	False	NA	NA	NA	72996817	73061454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_72997072_72998076_72998159_73047185_73047357_73059036_73059131_73061022
transcript_146293.nic	chr3	+	512	3	ISM	ENSG00000163605.15	ENST00000470976.1	1033	5	-45	14138	-30	-11735	5prime_fragment	FALSE	canonical	3	784	junction_2	30.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAGGAAAGAATACTGAAA	NA	False	NA	NA	False	AATATA	-16	NA	72996772	73047316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_72997072_72998076_72998159_73047185
transcript_146297.known	chr3	-	4251	10	FSM	ENSG00000121440.15	ENST00000263666.9	4251	10	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_4	5.50644964149505	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTTTTCCCTTGGTTG	-73624442	True	NA	-11	True	AATAAA	-17	NA	73624941	73382430	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_73384931_73385668_73385786_73387967_73388070_73389815_73389879_73391017_73391117_73400921_73401010_73404147_73404396_73602353_73602462_73608597_73608685_73624102
transcript_146303.nnic	chr3	+	496	2	NNC	ENSG00000287398.1	novel	790	3	NA	NA	-25	-25724	at_least_one_novel_splicesite	FALSE	canonical	3	609	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGGATTTGCTTTTGTAA	75214382	True	NA	NA	False	NA	NA	NA	75214484	75215046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_75214556_75214621
transcript_146304.known	chr3	-	2425	8	FSM	ENSG00000244026.7	ENST00000459803.6	2447	8	22	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	34.9897944304581	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACACCCCTTAATCTACA	-75433535	True	NA	-17	True	AATAAA	-17	NA	75435048	75421565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_75423062_75426449_75426600_75427426_75427693_75427774_75427909_75429135_75429238_75430831_75430915_75432807_75432871_75434917
transcript_146308.known	chr3	-	2238	7	FSM	ENSG00000244026.7	ENST00000484945.6	2406	7	168	0	12	0	multi-exon	FALSE	canonical	1	1	junction_4	36.0770779797305	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCTTAATCTACAGATGAT	-75433444	False	NA	-11	True	AATAAA	-23	NA	75434957	75421559	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_75423062_75426449_75426600_75427426_75427693_75427774_75427909_75430831_75430915_75432807_75432871_75434917
transcript_146311.nnic	chr3	-	2087	6	FSM	ENSG00000244026.7	ENST00000689507.1	2116	6	15	14	0	0	multi-exon	FALSE	canonical	2	7	junction_2	34.0094104624	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACACCCCTTAATCTACA	-75433597	True	NA	-17	True	AATAAA	-17	NA	75435110	75421565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_75423062_75426449_75426600_75429135_75429238_75430831_75430915_75432807_75432871_75434917
transcript_146317.known	chr3	-	839	5	FSM	ENSG00000244026.7	ENST00000489609.6	876	5	37	0	13	0	multi-exon	FALSE	canonical	2	4	junction_1	29.2350389088163	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTGTGCAGATAAAAAAGT	-75433522	True	NA	NA	False	NA	NA	NA	75435035	75422717	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_75423143_75426449_75426600_75430831_75430915_75432807_75432871_75434917
transcript_146318.nic	chr3	-	2193	5	FSM	ENSG00000244026.7	ENST00000692276.1	2207	5	0	14	0	0	multi-exon	FALSE	canonical	2	8	junction_4	27.1327753832887	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACACCCCTTAATCTACA	-75433612	True	NA	-17	True	AATAAA	-17	NA	75435125	75421565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_75423062_75426449_75426600_75430831_75430915_75432807_75432871_75434724
transcript_146319.known	chr3	-	1068	5	FSM	ENSG00000244026.7	ENST00000478666.6	2014	5	79	867	2	299	multi-exon	FALSE	canonical	3	45	junction_2	14.7711712467224	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGTACTGCAGAGGTCAC	-75433533	True	NA	NA	False	NA	NA	NA	75435046	75422418	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_75423062_75426449_75426600_75430831_75430915_75432807_75432871_75434917
transcript_146320.nic	chr3	-	2064	5	FSM	ENSG00000244026.7	ENST00000686855.1	2026	5	-42	4	-42	0	multi-exon	FALSE	canonical	3	14	junction_2	27.5454170416786	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACACCCCTTAATCTACA	-75433654	False	NA	-17	True	AATAAA	-17	NA	75435167	75421565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_75423062_75426449_75426622_75430831_75430915_75432807_75432871_75434917
transcript_146324.nic	chr3	-	1720	4	ISM	ENSG00000244026.7	ENST00000489609.6	876	5	-95	2558	-42	0	5prime_fragment	FALSE	canonical	3	45	junction_1	15.1510909031513	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTCTTTCTTCAGATAC	-75433654	False	NA	NA	False	AAAAAG	-29	NA	75435167	75425275	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_75426600_75430831_75430915_75432807_75432871_75434917
transcript_146326.known	chr3	-	2152	5	FSM	ENSG00000244026.7	ENST00000497543.5	2152	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	31.4642654451045	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACAGATGATCTGTGGCT	-75433535	True	NA	-3	True	AATAAA	-31	NA	75435048	75421551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_75423062_75426449_75426622_75430831_75430915_75432807_75432871_75434724
transcript_146335.known	chr3	-	1169	6	FSM	ENSG00000227124.11	ENST00000477374.5	1169	6	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_2	15.8568597143318	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGACTTTTTCTTGTCAT	-75782608	True	NA	-5	True	AATAAA	-30	NA	75785553	75729960	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_75730619_75732059_75732122_75741275_75741369_75741609_75741737_75783305_75783365_75785383
transcript_146347.nnic	chr3	+	991	2	FSM	ENSG00000242516.3	ENST00000692722.1	985	2	-7	1	-7	0	multi-exon	FALSE	canonical	3	32	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATGATAGAACAATTTATA	75670852	True	NA	15	True	AATAAA	-20	NA	75672246	75679300	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_75672770_75678832
transcript_146349.known	chr3	+	1344	6	FSM	ENSG00000242516.3	ENST00000463183.2	1344	6	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	9.26498785752038	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATACCTCTGGGTATA	75670996	False	NA	29	True	AATAAA	-34	NA	75672390	75679314	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_75672770_75673193_75673239_75673846_75674007_75675763_75675881_75675967_75676129_75678832
transcript_146351.known	chr3	+	1767	5	FSM	ENSG00000242516.3	ENST00000669013.1	1767	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	15.3846514422654	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTTGTATAATGACTT	75671190	False	NA	20	True	TATAAA	-17	NA	75672584	75680092	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_75672770_75673193_75673239_75673846_75674007_75675763_75675881_75678832
transcript_146352.known	chr3	+	880	5	FSM	ENSG00000242516.3	ENST00000662338.1	880	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	10.6183802907977	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATACCTCTGGGTATA	75672455	True	NA	29	True	AATAAA	-34	NA	75672694	75679314	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_75672770_75673193_75673239_75675763_75675881_75675967_75676129_75678832
transcript_146353.known	chr3	+	716	4	FSM	ENSG00000242516.3	ENST00000665741.1	716	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	17.1075032271418	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATGATAGAACAATTTATA	75672444	True	NA	15	True	AATAAA	-20	NA	75672683	75679300	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_75672770_75673193_75673239_75675763_75675881_75678832
transcript_146354.known	chr3	+	822	4	FSM	ENSG00000242516.3	ENST00000666754.1	822	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	4.08248290463863	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATACCTCTGGGTATA	75672468	True	NA	29	True	AATAAA	-34	NA	75672707	75679314	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_75672770_75675763_75675881_75675967_75676129_75678832
transcript_146355.nic	chr3	+	946	3	ISM	ENSG00000242516.3	ENST00000463183.2	1344	6	-363	5309	-226	-2620	5prime_fragment	FALSE	canonical	3	24	junction_2	8.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAGTATTTATTGTAGTC	75672015	False	NA	NA	False	AATAAA	-17	NA	75672027	75674005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_75672770_75673193_75673239_75673846
transcript_146357.known	chr3	+	671	3	FSM	ENSG00000242516.3	ENST00000656252.1	671	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	15	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATGATAGAACAATTTATA	75672444	True	NA	15	True	AATAAA	-20	NA	75672683	75679300	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_75672770_75675763_75675881_75678832
transcript_146363.known	chr3	-	5600	29	FSM	ENSG00000169855.21	ENST00000495273.5	5600	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	64.182496501327	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAACCATTATACCTTAC	-79019000	False	3051	NA	False	NA	NA	NA	79019015	78598687	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_78598928_78600112_78600310_78606732_78607042_78614647_78614801_78617634_78618042_78627320_78627570_78631160_78631306_78633934_78634043_78635772_78636109_78639743_78639899_78646147_78646191_78651731_78651930_78657097_78657270_78659685_78659808_78661029_78661262_78661992_78662115_78667882_78668050_78668133_78668303_78668483_78668566_78670095_78670302_78685745_78685918_78688647_78688773_78693347_78693357_78714396_78714525_78717274_78717414_78717762_78717884_78746742_78746901_78938600_78938928_79018406
transcript_146368.nic	chr3	-	4463	15	ISM	ENSG00000169855.21	ENST00000495273.5	5600	29	-606	61251	-162	0	5prime_fragment	FALSE	canonical	0	0	junction_8	63.7570324252429	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-79019593	True	NA	NA	False	NA	NA	NA	79019621	78659938	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_78661262_78661992_78662115_78667882_78668050_78668133_78668303_78668483_78668566_78670095_78670302_78685745_78685918_78688647_78688773_78693347_78693357_78714396_78714525_78717274_78717414_78717762_78717884_78746742_78746901_78938600_78938928_79018406
transcript_14637.known	chr1	-	3180	3	FSM	ENSG00000163348.4	ENST00000368457.3	3180	3	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_2	28.5	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAAGGACTCCTTGCTGTT	-154961759	False	10293	-9	True	AATAAA	-18	NA	154961782	154957025	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154959847_154960976_154961027_154961473
transcript_146373.known	chr3	-	7483	29	FSM	ENSG00000169855.21	ENST00000618846.4	7483	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	78.4160395270128	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACATCTTTCTTTCTTG	-79016408	True	NA	-36	True	ATTAAA	-10	NA	79019459	78597245	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_78598928_78600112_78600310_78606732_78607042_78614647_78614801_78617634_78618042_78627320_78627570_78631160_78631302_78633930_78634043_78635772_78636109_78639743_78639899_78646147_78646191_78651731_78651930_78657097_78657270_78659685_78659801_78661025_78661262_78661992_78662115_78667882_78668050_78668133_78668303_78668483_78668566_78670095_78670302_78685745_78685918_78688647_78688773_78693347_78693357_78714396_78714525_78717274_78717414_78717762_78717884_78746742_78746901_78938600_78938928_79018406
transcript_146375.known	chr3	-	2941	16	FSM	ENSG00000114480.13	ENST00000429644.7	2941	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	24.7318058827539	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTTTGCTAATGTTTAT	-81761358	True	NA	-5	True	AATAAA	-15	NA	81761645	81489702	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_81490464_81499109_81499228_81535194_81535326_81536910_81537096_81577924_81578097_81581164_81581276_81586091_81586191_81591036_81591165_81593907_81594024_81642780_81642991_81646391_81646483_81648855_81648992_81649795_81649922_81670837_81670954_81705443_81705614_81761374
transcript_146379.known	chr3	-	10438	4	FSM	ENSG00000206538.9	ENST00000398399.7	10438	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	4.92160768674447	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACGAGGTTCTTTCTTTG	-86990630	True	NA	-2	True	AATAAA	-16	NA	86991149	86937972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_86947068_86968589_86969124_86978525_86978803_86990617
transcript_14638.known	chr1	-	1306	3	FSM	ENSG00000163348.4	ENST00000368456.1	1306	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	147	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTCTTCCAGGGTGATTT	-154962013	False	NA	NA	False	NA	NA	NA	154962036	154958739	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154959847_154960976_154961027_154961887
transcript_146381.known	chr3	+	2644	7	FSM	ENSG00000083937.10	ENST00000676705.1	2644	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	177.693243790778	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTTTCTTACCTTTTT	87221806	True	NA	24	True	AATAAA	-14	NA	87227311	87255486	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_87227557_87240326_87240454_87240698_87240791_87245713_87245909_87249874_87249978_87253403_87253511_87253711
transcript_146384.known	chr3	+	2590	6	FSM	ENSG00000083937.10	ENST00000263780.9	2590	6	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_1	32.4653661614959	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTCAAAAGAATGATCTT	87221803	True	NA	94	True	ATTAAA	-22	NA	87227308	87255556	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_87227557_87240698_87240791_87245713_87245909_87249874_87249978_87253403_87253511_87253711
transcript_146387.known	chr3	+	2528	5	FSM	ENSG00000083937.10	ENST00000471660.5	2528	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	158.667104341133	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGTAATTTTTCAAAAGA	87221765	True	NA	86	True	ATTAAA	-14	NA	87227270	87255548	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_87227557_87245713_87245909_87249874_87249978_87253403_87253511_87253711
transcript_146389.nic	chr3	+	630	4	ISM	ENSG00000083937.10	ENST00000677929.1	5899	5	-22	5492	-8	2888	5prime_fragment	FALSE	canonical	3	326	junction_1	31.961782734315	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGCAGAATTTCCAGAAG	87221757	True	NA	NA	False	NA	NA	NA	87227262	87249923	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_87227557_87240698_87240791_87245713_87245909_87249874
transcript_146390.nic	chr3	+	380	2	ISM	ENSG00000083937.10	ENST00000676947.1	1297	3	-107	5947	-8	-5947	5prime_fragment	FALSE	canonical	3	326	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTGGTAAGTAGAACGTT	87221757	True	NA	NA	False	AAGAAA	-3	NA	87227262	87240784	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_87227557_87240698
transcript_146391.known	chr3	+	6460	9	FSM	ENSG00000175105.8	ENST00000636215.2	6460	9	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_5	8.70972875582242	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTGTTCAATTTTATGT	88058181	True	NA	4	True	AATAAA	-17	NA	88059254	88144660	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_88059506_88086256_88086403_88113114_88113197_88126133_88126270_88128808_88129012_88129686_88129827_88135060_88135203_88138704_88141049_88141644
transcript_146394.known	chr3	-	4548	4	FSM	ENSG00000163320.12	ENST00000482016.6	4548	4	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_2	373.652542105928	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAATCTTACTGAGTTAT	-88048790	True	NA	48	True	AATATA	-19	NA	88059005	88051949	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_88056000_88057190_88057293_88058018_88058224_88058814
transcript_146398.known	chr3	-	1063	4	FSM	ENSG00000163320.12	ENST00000462901.5	1063	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	337.534524983083	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGTGTTGATTGTGTGG	NA	False	NA	-24	True	ATTAAA	-1	NA	88149885	88055425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_88056000_88058018_88058224_88140969_88141079_88149710
transcript_146401.known	chr3	-	4495	3	FSM	ENSG00000163320.12	ENST00000309534.10	4495	3	0	0	0	0	multi-exon	FALSE	canonical	3	721	junction_1	83.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTACTGAGTTATTTTTCT	-88048833	True	NA	54	True	AATATA	-25	NA	88059048	88051943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_88056000_88058018_88058224_88058814
transcript_146407.known	chr3	-	717	2	FSM	ENSG00000163320.12	ENST00000474441.1	717	2	0	0	0	0	multi-exon	FALSE	canonical	3	888	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATTTAATATCTACCACA	-88048730	True	NA	NA	False	NA	NA	NA	88058945	88057637	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_88058224_88058814
transcript_146409.known	chr3	+	2414	3	FSM	ENSG00000179021.10	ENST00000318887.8	2414	3	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	15	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAGTGTATCGTTCAGAT	88148232	True	NA	18	True	AATAAA	-29	NA	88149958	88157965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_88150186_88153229_88153472_88156020
transcript_14641.known	chr1	+	799	1	FSM	ENSG00000271380.1	ENST00000605085.1	799	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCTGGTATAAAAGGTG	154961743	False	NA	NA	False	AATAAA	-15	NA	154961824	154962623	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154961800_154962600
transcript_146411.known	chr3	+	1259	3	FSM	ENSG00000179021.10	ENST00000486971.1	1259	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	63	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAATATTTTCCTTTTACT	88148260	True	NA	30	True	AATAAA	-44	NA	88149986	88156944	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_88150186_88153229_88153472_88156126
transcript_146412.known	chr3	-	3372	15	FSM	ENSG00000184500.16	ENST00000394236.9	3372	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_12	4.21186371080159	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTAACTCTTCATACAAC	-93973787	True	NA	NA	False	AATAAA	-19	NA	93973896	93873050	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_93874406_93876965_93877192_93879162_93879315_93884727_93884897_93886335_93886504_93892932_93893123_93896575_93896692_93898447_93898570_93900803_93900930_93905783_93905916_93906020_93906144_93910618_93910706_93924239_93924265_93927249_93927408_93973673
transcript_146419.known	chr3	+	6431	6	FSM	ENSG00000178694.10	ENST00000314622.9	6431	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	4.3081318457076	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGTACTGAATTTTTT	94062369	True	NA	13	True	AATAAA	-16	NA	94063060	94131832	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_94063139_94064436_94064547_94084106_94084451_94094139_94094295_94095032_94095155_94126210
transcript_14642.known	chr1	-	3481	12	FSM	ENSG00000160691.19	ENST00000448116.7	3481	12	0	0	0	0	multi-exon	FALSE	canonical	3	668	junction_3	142.641375426175	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCTCTTAACCCTTC	-154960454	True	NA	-14	True	ATTAAA	-17	NA	154970747	154962297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154963932_154965542_154965782_154965945_154966081_154966161_154966232_154966318_154966518_154967670_154967798_154967979_154968032_154968203_154968258_154968494_154968615_154968770_154968835_154969377_154969449_154970031
transcript_146421.known	chr3	+	3524	11	FSM	ENSG00000169379.17	ENST00000681380.1	3524	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	18.0690342852074	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCCTTAAGCATTTTAAAAA	93979530	True	NA	NA	False	AATATA	-42	NA	93980141	94055131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_93980483_93995873_93995945_94003658_94003909_94035330_94035437_94036551_94036755_94037931_94038019_94039879_94039989_94043014_94043241_94049405_94049523_94050823_94050893_94053186
transcript_146422.known	chr3	-	3856	2	FSM	ENSG00000178700.9	ENST00000314636.3	3856	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTCTGAATCTCTAATA	-94062754	True	NA	-9	True	AATAAA	-17	NA	94062916	94057921	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_94061607_94062745
transcript_146424.known	chr3	+	1630	9	FSM	ENSG00000113966.10	ENST00000335979.6	1630	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	23.3073888498905	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGTGCGCTTTGTTTAT	NA	False	NA	10	True	AATAAA	-20	NA	97764520	97798535	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_97764978_97765990_97766090_97768080_97768231_97780158_97780221_97780614_97780684_97784954_97785050_97787989_97788120_97791770_97791827_97798023
transcript_146427.known	chr3	+	3988	8	FSM	ENSG00000113966.10	ENST00000463745.6	3988	8	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_6	10.1900311429297	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACAGTGATTAAGAAATGG	97764248	True	NA	57	True	AATAAA	-35	NA	97764757	97801229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_97764978_97768080_97768231_97780158_97780221_97780614_97780684_97784954_97785050_97787989_97788120_97791770_97791827_97798023
transcript_14643.known	chr1	-	3472	12	FSM	ENSG00000160691.19	ENST00000368445.9	3472	12	0	0	0	0	multi-exon	TRUE	canonical	3	416	junction_3	207.73946652096	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCTCTTAACCCTTC	-154960448	True	NA	-14	True	ATTAAA	-17	NA	154970741	154962297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154963932_154965542_154965782_154965945_154966078_154966161_154966232_154966318_154966518_154967670_154967798_154967979_154968032_154968203_154968258_154968494_154968615_154968770_154968835_154969377_154969449_154970031
transcript_146438.nnic	chr3	+	4135	3	NIC	ENSG00000080200.10	novel	10779	22	NA	NA	-49	-66110	intron_retention	FALSE	canonical	3	14	junction_1	5.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAGAAATGATACTTTTGA	97820049	True	NA	NA	False	AAGAAA	-3	NA	97821961	97875151	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_97822356_97864216_97864648_97871841
transcript_14644.known	chr1	-	2879	10	FSM	ENSG00000160691.19	ENST00000368449.8	2879	10	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_9	379.118405557022	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCTCTTAACCCTTC	-154960454	True	NA	-14	True	ATTAAA	-17	NA	154970747	154962297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_154963932_154965542_154965782_154965945_154966078_154966161_154966232_154966318_154966518_154967670_154967798_154967979_154968032_154968203_154968258_154968494_154968595_154970475
transcript_146440.nic	chr3	+	412	2	ISM	ENSG00000080200.10	ENST00000389622.7	10779	22	-31	101754	-31	-98031	5prime_fragment	FALSE	canonical	3	9	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAATGTACTTTCATCAG	97820067	True	NA	NA	False	NA	NA	NA	97821979	97843230	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_97822356_97843194
transcript_146442.known	chr3	-	2232	10	FSM	ENSG00000170854.18	ENST00000360258.8	2232	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	38.0383172636082	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTGGGTCTTCGAGTTT	-97972076	False	NA	NA	False	TATAAA	-11	NA	97972087	97944559	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_97945343_97945797_97945888_97947360_97947450_97949843_97950013_97950785_97950889_97954391_97954496_97959050_97959180_97961588_97961709_97967161_97967633_97971913
transcript_146443.nic	chr3	-	2437	10	NIC	ENSG00000170854.18	novel	4854	10	NA	NA	-10	164	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	26.9970277284897	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGGTTTCTGTTATTTAG	-97971042	True	NA	5	True	AATAAA	-26	NA	97972441	97944241	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_97945343_97945797_97945888_97947360_97947450_97949843_97950013_97950785_97950889_97954391_97954496_97959050_97959180_97961588_97961709_97967161_97967633_97972380
transcript_146445.known	chr3	-	5347	10	FSM	ENSG00000170854.18	ENST00000333396.11	5347	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	32.1800490297258	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGTAGTGTTCTATTC	-97971058	True	NA	-3	True	AATAAA	-17	NA	97972457	97941817	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_97945343_97945797_97945888_97947360_97947450_97949843_97950016_97950785_97950889_97954391_97954496_97959050_97959180_97961588_97961709_97967161_97967633_97971913
transcript_146446.known	chr3	-	4854	10	FSM	ENSG00000170854.18	ENST00000394198.7	4854	10	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_4	15.098033556856	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGTAGTGTTCTATTC	-97971032	True	NA	-3	True	AATAAA	-17	NA	97972431	97941817	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_97945343_97945797_97945888_97947360_97947450_97949843_97950016_97950785_97950889_97954391_97954496_97959050_97959180_97961588_97961709_97967161_97967633_97972380
transcript_146448.nic	chr3	-	1870	10	NIC	ENSG00000170854.18	novel	4854	10	NA	NA	0	-239	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	26.9970277284897	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAACTGGTTTTTTATA	-97971032	True	NA	-7	True	ATTAAA	-12	NA	97972431	97944798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_97945343_97945797_97945888_97947360_97947450_97949843_97950013_97950785_97950889_97954391_97954496_97959050_97959180_97961588_97961709_97967161_97967633_97972380
transcript_14646.known	chr1	+	779	3	FSM	ENSG00000173207.13	ENST00000308987.6	779	3	0	0	0	0	multi-exon	FALSE	canonical	3	4039	junction_1	398.5	1368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTAATTGTACGGGTTTT	154939952	True	NA	43	True	ATTAAA	-23	NA	154974680	154979251	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154974805_154977986_154978115_154978724
transcript_146472.known	chr3	-	2709	7	FSM	ENSG00000080819.9	ENST00000647941.2	2709	7	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_2	6.89605362185907	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATATTTATATTTTTTGT	-98590670	True	NA	NA	False	AATAAA	-23	NA	98593611	98579445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_98580771_98581406_98581512_98585440_98585660_98588712_98588855_98590631_98590743_98591011_98591156_98592948
transcript_146476.known	chr3	-	865	6	FSM	ENSG00000080822.17	ENST00000502299.5	865	6	0	0	0	0	multi-exon	FALSE	canonical	1	17	junction_4	376.912509741982	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCGGAAAGAGTACACCTTA	-98512474	True	NA	NA	False	NA	NA	NA	98522931	98516702	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_98516880_98517051_98517190_98518884_98518996_98521132_98521438_98521652_98521704_98522848
transcript_146477.known	chr3	-	573	6	FSM	ENSG00000080822.17	ENST00000510541.5	573	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	373.394911588254	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGGCTTGTGTCTCTG	-98512445	True	NA	NA	False	NA	NA	NA	98522902	98516773	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_98516880_98517051_98517190_98518884_98518996_98521329_98521443_98521652_98521704_98522848
transcript_14648.known	chr1	+	912	3	FSM	ENSG00000173207.13	ENST00000368439.5	912	3	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	2364	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGTAATTGTACGGGT	154939924	True	NA	40	True	ATTAAA	-20	NA	154974652	154979248	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154974913_154977986_154978115_154978724
transcript_146481.known	chr3	-	916	5	FSM	ENSG00000080822.17	ENST00000508902.5	916	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_4	307.272680204407	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACACCAACCGGAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	98523041	98516710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_98516880_98517051_98517190_98518884_98518996_98521132_98521438_98522848
transcript_146482.known	chr3	-	582	5	FSM	ENSG00000080822.17	ENST00000512147.5	582	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	314.393364274757	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACACCAACCGGAAAGAGT	-98512442	True	NA	NA	False	NA	NA	NA	98522899	98516710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_98516880_98517051_98517190_98518884_98518996_98521329_98521443_98522848
transcript_146484.known	chr3	-	815	4	FSM	ENSG00000080822.17	ENST00000507411.5	815	4	0	0	0	0	multi-exon	FALSE	canonical	3	632	junction_3	62.3591746791654	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTAGAGCTCCCTGAC	-98512418	True	NA	NA	False	NA	NA	NA	98522875	98516822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_98517190_98518884_98518996_98521132_98521443_98522848
transcript_146485.known	chr3	-	642	4	FSM	ENSG00000080822.17	ENST00000511081.5	642	4	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_3	324.988546806738	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCTATTTTATTTATAC	-98512448	True	NA	41	True	NA	NA	NA	98522905	98516543	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_98516880_98517051_98517190_98518884_98518996_98522848
transcript_146486.known	chr3	-	214	1	FSM	ENSG00000250562.1	ENST00000502376.1	214	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGCCACACTGATTTGAA	NA	False	NA	NA	False	NA	NA	NA	98525274	98525060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_98525100_98525300
transcript_146488.known	chr3	-	6128	16	FSM	ENSG00000057019.16	ENST00000326840.11	6128	16	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_5	30.1897701584862	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATTTATGGCCAATATTG	-98895885	True	NA	-2	True	TATAAA	-28	NA	98901695	98795940	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_98799842_98800578_98800717_98801599_98801650_98808080_98808175_98811193_98811320_98811467_98811555_98812331_98812483_98817768_98817894_98819201_98819418_98820247_98820289_98822227_98822362_98822668_98822742_98825314_98825367_98849460_98849599_98881539_98881768_98901121
transcript_14650.nic	chr1	+	2384	8	NIC	ENSG00000160688.19	novel	1730	8	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	35	junction_2	176.92129000531	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGCTCTAGCTGTGTC	154974956	True	NA	22	True	AATAAA	-18	NA	154983343	154993111	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_154983398_154983841_154984067_154987465_154988850_154989559_154989708_154990158_154990258_154990338_154990529_154992712_154992787_154992901
transcript_146510.nic	chr3	-	1498	8	ISM	ENSG00000057019.16	ENST00000326857.9	3959	16	-417	21425	-48	3101	5prime_fragment	FALSE	canonical	3	286	junction_6	29.8321836893223	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACAGGTTAAGAGACAAAA	-98895933	True	NA	NA	False	AATAGA	-21	NA	98901743	98819207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_98819418_98820247_98820289_98822227_98822362_98822668_98822742_98825314_98825367_98849460_98849599_98881539_98881768_98901121
transcript_146516.known	chr3	+	3148	10	FSM	ENSG00000064225.13	ENST00000486249.5	3148	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	19.5984378314216	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGGATGGCGCTGGT	98732081	True	NA	NA	False	AATAAA	-19	NA	98732449	98795845	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_98732533_98768429_98768530_98770878_98770957_98771120_98771191_98772812_98772917_98773919_98773984_98788035_98788223_98788325_98788464_98791840_98791994_98793674
transcript_146517.known	chr3	+	1886	10	FSM	ENSG00000064225.13	ENST00000265261.11	3385	10	0	1499	0	418	multi-exon	FALSE	canonical	3	13	junction_1	12.838983845026	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAACTAAAGAAAGAATA	NA	False	NA	84	True	CATAAA	-18	NA	98732254	98794362	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_98732533_98768429_98768530_98770878_98770957_98772812_98772917_98773919_98773984_98784944_98785041_98788035_98788223_98788325_98788464_98791840_98791994_98793674
transcript_146519.known	chr3	+	3399	10	FSM	ENSG00000064225.13	ENST00000613264.5	3399	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	15.6946165182307	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGGATGGCGCTGGT	98732663	False	NA	NA	False	AATAAA	-19	NA	98732703	98795845	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_98733012_98768429_98768530_98770878_98770957_98772812_98772917_98773919_98773984_98784944_98785041_98788035_98788223_98788325_98788464_98791840_98791994_98793674
transcript_146522.known	chr3	+	3029	4	FSM	ENSG00000144810.16	ENST00000273342.8	3029	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.88561808316413	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGTCCTCGTCAGAATTG	99638541	True	NA	NA	False	NA	NA	NA	99638595	99796733	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_99638665_99744896_99745022_99790679_99791011_99794229
transcript_146523.nnic	chr3	+	1247	11	NNC	ENSG00000184220.12	novel	4302	10	NA	NA	-3	0	at_least_one_novel_splicesite	TRUE	canonical	2	34	junction_1	236.345932903446	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATCCTTGTTGAGCGGAC	99804867	True	NA	9	True	AATAAA	-18	NA	99817833	100178599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_99818044_100010130_100010181_100146972_100147062_100160429_100160502_100162302_100162433_100166334_100166395_100167737_100167841_100171838_100171900_100172315_100172404_100176326_100176416_100178304
transcript_146526.nnic	chr3	+	375	4	NNC	ENSG00000184220.12	novel	397	4	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	2	34	junction_1	287.556757682529	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGGAAAGAAAAGAGAATA	99804867	True	NA	18	True	NA	NA	NA	99817833	100160455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_99818044_100010130_100010181_100146972_100147062_100160429
transcript_146528.known	chr3	+	397	4	FSM	ENSG00000184220.12	ENST00000463526.1	397	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	303.114206566143	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGGAAAGAAAAGAGAATA	99804870	True	NA	18	True	NA	NA	NA	99817836	100160455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_99818044_100051231_100051307_100146972_100147062_100160429
transcript_146529.known	chr3	+	3697	19	FSM	ENSG00000036054.13	ENST00000394144.9	3697	19	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_14	106.29543327821	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTTCTTAAAGACACTG	100256098	True	NA	22	True	AATAAA	-19	NA	100260991	100325238	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_100261072_100279648_100279761_100281741_100281848_100283606_100283812_100290577_100290702_100295086_100295212_100295301_100295349_100296171_100296276_100297922_100298046_100299238_100299332_100302066_100302238_100304845_100304889_100306436_100306544_100310402_100310543_100311832_100311878_100316098_100316188_100319068_100319205_100320776_100320972_100323586
transcript_146531.known	chr3	+	3656	18	FSM	ENSG00000036054.13	ENST00000344949.9	3656	18	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_14	32.2754151351354	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACTGTCTCTCTCTTTCT	100256107	True	NA	35	True	AATAAA	-32	NA	100261000	100325251	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_100261072_100279648_100279761_100281741_100281848_100283606_100283812_100290577_100290702_100295086_100295212_100295301_100295349_100296171_100296276_100297922_100298046_100299238_100299332_100302066_100302238_100304845_100304889_100306436_100306544_100310402_100310543_100316098_100316188_100319068_100319205_100320776_100320972_100323586
transcript_146535.known	chr3	+	4054	18	FSM	ENSG00000036054.13	ENST00000486274.5	4054	18	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	86.3723331327564	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTTCTTAAAGACACTG	100256170	True	NA	22	True	AATAAA	-19	NA	100261063	100325238	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_100261546_100279648_100279761_100281741_100281848_100283606_100283812_100290577_100290702_100295086_100295212_100295301_100295349_100296171_100296276_100297922_100298046_100299238_100299332_100302066_100302238_100304845_100304889_100306436_100306544_100310402_100310543_100316098_100316188_100319068_100319205_100320776_100320972_100323586
transcript_146539.known	chr3	+	7233	10	FSM	ENSG00000114021.12	ENST00000394140.9	7233	10	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_1	41.4124094242413	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCTGAAAACAGTGCCTT	100331978	True	NA	NA	False	AGTAAA	-25	NA	100334756	100361635	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_100334799_100339086_100339206_100339814_100339936_100341072_100341162_100345584_100345679_100346180_100346256_100348802_100348882_100352403_100352503_100354771_100354828_100355176
transcript_146541.nic	chr3	+	1234	10	NIC	ENSG00000114021.12	novel	7233	10	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	106.19281322315	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTAATTCGGCCT	100332007	True	NA	9	True	ATTAAA	-15	NA	100334785	100355351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_100335113_100339086_100339206_100339814_100339936_100341072_100341162_100345584_100345679_100346180_100346256_100348802_100348882_100352403_100352503_100354771_100354828_100355176
transcript_146544.known	chr3	+	1469	9	FSM	ENSG00000114021.12	ENST00000465368.5	1469	9	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_1	40.2150469351958	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTAATTCGGCCT	100331960	True	NA	9	True	ATTAAA	-15	NA	100334738	100355351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_100334799_100339086_100339206_100339814_100339936_100341072_100341162_100345584_100346256_100348802_100348882_100352403_100352503_100354771_100354828_100355176
transcript_146550.known	chr3	-	4100	12	FSM	ENSG00000154174.8	ENST00000284320.6	4100	12	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_8	28.4694994106713	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGTTTAGGCTGGGCATG	-100395071	True	NA	24	True	AATAAA	-45	NA	100401089	100363430	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_100365718_100368043_100368167_100369037_100369136_100372605_100372723_100373537_100373646_100375017_100375153_100377704_100377913_100381614_100381764_100384478_100384589_100386217_100386345_100386804_100386979_100400625
transcript_146557.nic	chr3	-	1229	4	ISM	ENSG00000154174.8	ENST00000284320.6	4100	12	-360	21054	-360	-7069	5prime_fragment	FALSE	canonical	3	308	junction_2	8.99382504215469	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGGTAAATTGATCTGA	-100400243	True	NA	NA	False	GATAAA	-40	NA	100401449	100384484	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_100384589_100386217_100386345_100386804_100386979_100400625
transcript_14656.known	chr1	+	1730	8	FSM	ENSG00000160688.19	ENST00000315144.14	1730	8	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_3	137.474153414898	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGCTCTAGCTGTGTC	154974971	True	NA	22	True	AATAAA	-18	NA	154983358	154993111	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154983398_154983841_154984067_154988104_154988850_154989559_154989708_154990158_154990258_154990338_154990529_154992712_154992787_154992901
transcript_146560.known	chr3	+	1813	4	FSM	ENSG00000206535.8	ENST00000489752.1	1813	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	19.09624744987	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGTCATTGGTATGACT	100401015	False	NA	0	True	CATAAA	-11	NA	100401610	100456301	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_100402440_100429696_100429886_100451679_100451950_100455776
transcript_146561.known	chr3	+	1864	4	FSM	ENSG00000206535.8	ENST00000383693.8	1864	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	0.471404520791032	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGAGTTTACTTTCTTA	100400943	True	NA	18	True	AATAAA	-15	NA	100401538	100456319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_100402440_100429696_100429886_100451718_100451950_100455776
transcript_146565.known	chr3	+	1723	4	FSM	ENSG00000206535.8	ENST00000466996.5	1723	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	19.09624744987	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGTATTTTAATAGAATAAA	100401200	False	NA	NA	False	AATAAA	-10	NA	100401531	100456188	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_100402440_100429696_100429886_100451735_100451950_100455776
transcript_146569.nnic	chr3	+	1752	7	NIC	ENSG00000181458.10	novel	1910	8	NA	NA	-38	0	combination_of_known_splicesites	FALSE	canonical	3	82	junction_2	64.2168634826987	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGAAATCTTTGTTTTT	100491933	True	NA	19	True	AATAAA	-25	NA	100492580	100577444	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_100492929_100519461_100519609_100555208_100555402_100556759_100556973_100558404_100558590_100568821_100568968_100576924
transcript_146573.known	chr3	+	1567	6	FSM	ENSG00000181458.10	ENST00000323523.8	1567	6	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	25.4982352330509	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGAAATCTTTGTTTTT	100491971	True	NA	19	True	AATAAA	-25	NA	100492618	100577444	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_100492929_100555208_100555402_100556759_100556973_100558404_100558590_100568821_100568968_100576924
transcript_146577.known	chr3	+	2015	9	FSM	ENSG00000114354.15	ENST00000674758.1	2015	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	334.163507881995	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	100709269	False	NA	12	True	AATAAA	-15	NA	100709471	100748964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_100709722_100710970_100711069_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736705_100744832_100744932_100748148
transcript_146578.known	chr3	+	1753	8	FSM	ENSG00000114354.15	ENST00000418917.7	1753	8	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_6	293.599199242638	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	100709115	False	NA	12	True	AATAAA	-15	NA	100709352	100748964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_100709432_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736717_100744837_100744932_100748148
transcript_146580.known	chr3	+	1783	8	FSM	ENSG00000114354.15	ENST00000476228.5	1783	8	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_6	183.213937621502	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	100706771	False	NA	12	True	AATAAA	-15	NA	100709605	100748964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_100709722_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736705_100744832_100744932_100748148
transcript_146582.known	chr3	+	1793	8	FSM	ENSG00000114354.15	ENST00000676431.1	1793	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	292.412554519836	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	100709260	False	NA	12	True	AATAAA	-15	NA	100709462	100748964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_100709589_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736705_100744832_100744932_100748148
transcript_146584.known	chr3	+	2005	8	FSM	ENSG00000114354.15	ENST00000487505.6	2005	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	248.679204878043	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	100709705	True	NA	12	True	AATAAA	-15	NA	100709969	100748964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_100710296_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736717_100744832_100744932_100748148
transcript_146589.known	chr3	-	4973	24	FSM	ENSG00000138468.16	ENST00000394095.7	4973	24	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_7	11.3663849571589	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGTGTATATCATGAAAT	-101512334	True	NA	NA	False	AATAAA	-18	NA	101513212	101324204	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_101326081_101327665_101327817_101328477_101328547_101328645_101328690_101330333_101330387_101331984_101332110_101332769_101332863_101337508_101337632_101340094_101340212_101341645_101341780_101343685_101343955_101347871_101348052_101351617_101351652_101361714_101361862_101364833_101364992_101366429_101366770_101367829_101368012_101372007_101372127_101398860_101399056_101417592_101417791_101458954_101459053_101493872_101493969_101501069_101501120_101513090
transcript_146593.known	chr3	-	3272	23	FSM	ENSG00000138468.16	ENST00000348610.3	3272	23	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_22	16.4055019998709	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCACAGAGAAGAAAATAACT	NA	False	NA	NA	False	NA	NA	NA	101513223	101325866	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_101326081_101327665_101327817_101328477_101328547_101328645_101328690_101330333_101330387_101331984_101332110_101332769_101332863_101337508_101337632_101340094_101340212_101341645_101341780_101343685_101343955_101347871_101348052_101351617_101351652_101361714_101361862_101364833_101364992_101366429_101366770_101367829_101368012_101372007_101372127_101398860_101399056_101417592_101417791_101458954_101459053_101493872_101493969_101513090
transcript_146594.known	chr3	-	4736	23	FSM	ENSG00000138468.16	ENST00000314261.11	4736	23	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_19	18.3915741577495	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGGTGTAATTTTTTTCC	NA	False	NA	NA	False	ATTAAA	-21	NA	101513241	101324272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_101326081_101327665_101327817_101328477_101328547_101328645_101328690_101330333_101330387_101331984_101332110_101332769_101332863_101337508_101337632_101340094_101340212_101341645_101341780_101343685_101343955_101347871_101348052_101351617_101351652_101361714_101361862_101364833_101364992_101366429_101366770_101367829_101368012_101372007_101372127_101398860_101399056_101458954_101459053_101493872_101493969_101501069_101501120_101513090
transcript_146597.known	chr3	+	1813	2	FSM	ENSG00000174173.7	ENST00000309922.7	1813	2	0	0	0	0	multi-exon	FALSE	canonical	3	691	junction_1	0	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATGAGCCATTCAAGCA	101548316	True	NA	23	True	AGTAAA	-23	NA	101561867	101566446	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_101562004_101564769
transcript_146604.known	chr3	+	2285	5	FSM	ENSG00000081154.12	ENST00000265260.8	2285	5	0	0	0	0	multi-exon	FALSE	canonical	3	2140	junction_1	199.924204387563	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGCTTACTGGTTTTTG	101537385	True	NA	43	True	AATAAA	-43	NA	101574179	101594465	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_101574280_101579789_101580005_101585436_101585512_101590214_101590271_101592626
transcript_146606.known	chr3	+	2165	5	FSM	ENSG00000081154.12	ENST00000460231.5	2165	5	0	0	0	0	multi-exon	FALSE	canonical	3	557	junction_1	874.80312070774	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAGTACCAATAAATTTG	101537395	True	NA	-15	True	NA	NA	NA	101574189	101594407	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_101574280_101579841_101580005_101585436_101585512_101590214_101590271_101592626
transcript_146607.known	chr3	+	786	5	FSM	ENSG00000081154.12	ENST00000498274.5	786	5	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	1074.29569951666	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGGGTGGGTGTAAAG	101537391	True	NA	-43	True	ATTAAA	-18	NA	101574185	101592771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_101574280_101579588_101580005_101585436_101585512_101590214_101590271_101592626
transcript_146617.known	chr3	+	2028	4	FSM	ENSG00000081154.12	ENST00000469941.5	2028	4	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	1195.04793023358	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTTTTTATTTTCTATT	101537399	True	NA	15	True	AATAAA	-15	NA	101574193	101594437	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_101574280_101585436_101585512_101590214_101590271_101592626
transcript_146625.known	chr3	+	742	3	FSM	ENSG00000081154.12	ENST00000486406.5	742	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	1247	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGGCATTTGTTTTGTTT	101537424	True	NA	21	True	AGTAAA	-27	NA	101574218	101593251	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_101574280_101590214_101590271_101592626
transcript_146626.known	chr3	-	459	1	FSM	ENSG00000242299.1	ENST00000496294.1	459	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	466	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTAGGCCTTGTCTGTT	NA	False	NA	NA	False	AAGAAA	-4	NA	101576947	101576488	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_101576500_101576900
transcript_146627.known	chr3	-	5657	11	FSM	ENSG00000066422.6	ENST00000312938.5	5657	11	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_9	10.0299551344959	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGACAAGAACGCAGGTACC	-101638425	False	38707	NA	False	NA	NA	NA	101677132	101648888	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_101651684_101652495_101652672_101652779_101652939_101654703_101654822_101656103_101656249_101659782_101660029_101664537_101664715_101664963_101665809_101671129_101671362_101671977_101672214_101676604
transcript_146628.known	chr3	+	2743	1	FSM	ENSG00000256628.3	ENST00000609682.1	2743	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTCTTCCCAGTGCAAAA	101676235	True	NA	NA	False	AATAAA	-15	NA	101676474	101679217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_101676500_101679200
transcript_146630.known	chr3	-	560	6	FSM	ENSG00000114391.13	ENST00000394077.8	560	6	0	0	0	0	multi-exon	FALSE	canonical	3	5038	junction_5	1337.9815544319	2474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTGCTGGATTTTTTTT	-101648011	True	NA	-12	True	AATAAA	-19	NA	101686718	101681090	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_101681216_101682428_101682493_101682770_101682908_101685817_101685929_101686481_101686558_101686671
transcript_146633.known	chr3	-	799	5	FSM	ENSG00000114391.13	ENST00000469605.1	799	5	0	0	0	0	multi-exon	FALSE	canonical	3	5038	junction_4	1493.51270081643	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGAAAGTTTCACAGT	-101647988	True	NA	NA	False	NA	NA	NA	101686695	101682041	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_101682493_101682770_101682908_101685817_101685929_101686481_101686558_101686671
transcript_146634.known	chr3	-	478	5	FSM	ENSG00000114391.13	ENST00000495401.5	478	5	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_1	3286.78676673739	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTAGGTTGTGCTGGATTT	-101647998	True	NA	-17	True	AATAAA	-14	NA	101686705	101681095	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_101681216_101682770_101682908_101685817_101685929_101686481_101686558_101686671
transcript_146636.known	chr3	-	668	5	FSM	ENSG00000114391.13	ENST00000464595.1	668	5	0	0	0	0	multi-exon	FALSE	canonical	3	7395	junction_1	521.029029901406	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTGCTGGATTTTTTTT	-101648005	True	NA	-12	True	AATAAA	-19	NA	101686712	101681090	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_101681216_101682428_101682493_101682770_101682908_101685817_101685929_101686481
transcript_146639.known	chr3	+	7672	11	FSM	ENSG00000182504.11	ENST00000341893.8	7672	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	5.35163526410386	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTCATCTGTTTATTTT	101723988	True	NA	15	True	AATAAA	-17	NA	101724613	101770562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_101724720_101726593_101726737_101727382_101727542_101728835_101728938_101731839_101731954_101732487_101732655_101755429_101755595_101757062_101757197_101757633_101758424_101762484_101762561_101764846
transcript_146640.known	chr3	+	2888	8	FSM	ENSG00000182504.11	ENST00000489172.5	2888	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	8.68026144626475	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGCCCAGGACCCAGGA	101723967	True	NA	NA	False	NA	NA	NA	101724592	101759512	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_101724720_101726593_101726737_101727382_101727542_101731839_101731954_101732487_101732655_101755429_101755595_101757062_101757197_101757633
transcript_146641.known	chr3	+	3923	12	FSM	ENSG00000144802.11	ENST00000326172.9	3923	12	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	11.4876865446773	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTGTCTTACATGCATT	101847789	True	NA	6	True	AATAAA	-15	NA	101849513	101861022	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_101849918_101852084_101852225_101852737_101852769_101852885_101852990_101853090_101853864_101854577_101854684_101855061_101855209_101855394_101855459_101855732_101855903_101857072_101857184_101857291_101857460_101859317
transcript_146650.known	chr3	+	8568	8	FSM	ENSG00000144815.17	ENST00000273347.10	8568	8	0	0	0	0	multi-exon	TRUE	canonical	3	50	junction_6	22.2829668636135	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTTTTTTTCTTTTTCT	101777359	True	NA	NA	False	ATTAAA	-17	NA	101779210	101828231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_101779325_101782109_101782291_101782659_101782781_101785401_101785690_101801234_101801990_101807052_101807127_101816794_101817002_101821403
transcript_146661.nnic	chr3	+	2404	6	NNC	ENSG00000144815.17	novel	8568	8	NA	NA	-10	5710	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_5	36.158539793526	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCTGAACCTGAGCTTG	101777340	True	NA	5	True	AATAAA	-21	NA	101779191	101807010	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_101779325_101782109_101782291_101782659_101782781_101785401_101785690_101801234_101801990_101806084
transcript_146662.nic	chr3	+	1562	6	ISM	ENSG00000144815.17	ENST00000273347.10	8568	8	-19	21095	-10	5836	5prime_fragment	FALSE	canonical	3	68	junction_5	18.004443895883	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAAGCTTGATGATTTGT	101777340	True	NA	NA	False	AATAAA	-13	NA	101779191	101807136	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_101779325_101782109_101782291_101782659_101782781_101785401_101785690_101801234_101801990_101807052
transcript_146668.known	chr3	+	4701	16	FSM	ENSG00000170017.12	ENST00000306107.9	4701	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	29.3249988159515	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTCTCCCACAGCTGTCT	105366668	True	NA	6	True	AATAAA	-18	NA	105366908	105576900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_105367482_105520066_105520168_105524288_105524509_105532001_105532067_105533602_105533691_105534662_105534846_105539974_105540103_105541632_105541766_105545222_105545336_105547148_105547285_105547389_105547524_105550126_105550260_105552143_105552183_105552467_105552586_105571851_105571965_105574476
transcript_146672.known	chr3	+	4189	15	FSM	ENSG00000170017.12	ENST00000472644.6	4189	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	38.6647680157826	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTATGCCTAAAAGATAATA	105367324	False	NA	-33	True	NA	NA	NA	105367342	105576861	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_105367482_105520066_105520168_105524288_105524509_105532001_105532067_105533602_105533691_105534662_105534846_105539974_105540103_105541632_105541766_105545222_105545336_105547148_105547285_105547389_105547524_105550126_105550260_105552467_105552586_105571851_105571965_105574476
transcript_146675.nic	chr3	+	1969	10	ISM	ENSG00000170017.12	ENST00000306107.9	4701	16	-220	29607	-220	1983	5prime_fragment	FALSE	canonical	3	96	junction_3	10.6666666666667	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTGGGCACTAATTCAAA	105366052	True	NA	NA	False	AATAAA	-2	NA	105366688	105547293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_105367482_105520066_105520168_105524288_105524509_105532001_105532067_105533602_105533691_105534662_105534846_105539974_105540103_105541632_105541766_105545222_105545336_105547148
transcript_146677.known	chr3	-	3669	20	FSM	ENSG00000114423.23	ENST00000646825.1	3669	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	24.4798520807365	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACTAATGCAAAAAAAAAA	-105866186	True	NA	NA	False	NA	NA	NA	105869039	105658414	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_105659230_105670232_105670353_105671023_105671047_105678430_105678572_105681478_105681611_105681723_105681819_105685319_105685467_105693493_105693589_105702093_105702460_105703987_105704174_105720046_105720251_105734008_105734141_105737170_105737259_105740493_105740632_105745916_105746039_105751461_105751619_105776395_105776543_105853413_105853665_105867409_105867592_105868911
transcript_146682.known	chr3	-	6749	19	FSM	ENSG00000114423.23	ENST00000394030.8	6749	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	19.0237830356545	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGAGTTGGTACTTTATT	-105866159	True	NA	NA	False	TATAAA	-17	NA	105869012	105655460	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_105659230_105670232_105670353_105678430_105678572_105681478_105681611_105681723_105681819_105685319_105685467_105693493_105693589_105702093_105702460_105703987_105704174_105720046_105720251_105734008_105734141_105737170_105737259_105740493_105740632_105745916_105746039_105751461_105751619_105776395_105776543_105853413_105853665_105867409_105867592_105868735
transcript_146694.known	chr3	+	5519	2	FSM	ENSG00000243701.8	ENST00000660597.1	5519	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGATCCGCCCGCCTG	107240474	True	NA	NA	False	NA	NA	NA	107240663	107251102	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_107241088_107246007
transcript_146700.known	chr3	+	9009	18	FSM	ENSG00000114439.19	ENST00000325805.13	9009	18	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_13	13.3411453469914	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTGTCCCCCTAAACTG	107518864	True	NA	22	True	AATAAA	-34	NA	107522961	107811339	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_107523108_107526326_107526399_107645835_107645910_107710451_107710623_107716606_107716850_107728764_107728961_107732955_107733024_107744629_107744711_107747964_107748040_107755597_107755679_107772627_107773637_107774718_107774858_107778370_107778520_107789786_107789877_107791239_107791300_107798522_107798721_107801094_107801282_107805369
transcript_146702.known	chr3	+	8930	17	FSM	ENSG00000114439.19	ENST00000415149.6	8930	17	0	0	0	0	multi-exon	FALSE	canonical	2	36	junction_10	8.00561326507845	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGAACATCGAATGATG	NA	False	NA	7	True	AATAAA	-19	NA	107522935	107811324	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_107523108_107526326_107526399_107645835_107645910_107710451_107710623_107716606_107716850_107728764_107728961_107732955_107733024_107744629_107744711_107747964_107748040_107755597_107755679_107772627_107773637_107774718_107774858_107778370_107778520_107791239_107791300_107798522_107798721_107801094_107801282_107805369
transcript_146704.known	chr3	+	2178	17	FSM	ENSG00000114439.19	ENST00000416476.6	2178	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	17.6666175313782	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGAAGTTAGCATCCTGG	107523025	False	NA	NA	False	NA	NA	NA	107523042	107805598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_107523108_107526326_107526399_107645835_107645910_107710451_107710623_107716606_107716850_107728764_107728961_107732955_107733024_107744629_107744711_107747964_107748040_107755597_107755679_107774718_107774858_107778370_107778520_107789786_107789877_107791239_107791300_107798522_107798721_107801094_107801282_107805369
transcript_146713.nic	chr3	+	1264	11	ISM	ENSG00000114439.19	ENST00000325805.13	9009	18	-2	38657	-1	0	5prime_fragment	FALSE	canonical	2	36	junction_10	7.82879301041993	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATCCGATGGTGGAAGA	107518862	True	NA	-22	True	AATAAA	-6	NA	107522959	107772682	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_107523108_107526326_107526399_107645835_107645910_107710451_107710623_107716606_107716850_107728764_107728961_107732955_107733024_107744629_107744711_107747964_107748040_107755597_107755679_107772627
transcript_146714.nic	chr3	+	1418	11	ISM	ENSG00000114439.19	ENST00000415149.6	8930	17	-27	38539	-27	0	5prime_fragment	FALSE	canonical	2	36	junction_10	7.82879301041993	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTGAAAAATCGGCTAAGG	NA	False	NA	81	True	ATTAAA	-42	NA	107522908	107772785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_107523108_107526326_107526399_107645835_107645910_107710451_107710623_107716606_107716850_107728764_107728961_107732955_107733024_107744629_107744711_107747964_107748040_107755597_107755679_107772627
transcript_146715.nic	chr3	+	1699	11	ISM	ENSG00000114439.19	ENST00000415149.6	8930	17	-27	38258	-27	0	5prime_fragment	FALSE	canonical	2	36	junction_10	7.82879301041993	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGCTAAAAAAGAAAAAGAAG	NA	False	NA	7	True	ATTAAA	-12	NA	107522908	107773066	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_107523108_107526326_107526399_107645835_107645910_107710451_107710623_107716606_107716850_107728764_107728961_107732955_107733024_107744629_107744711_107747964_107748040_107755597_107755679_107772627
transcript_146719.nnic	chr3	+	1601	11	NNC	ENSG00000114439.19	novel	819	5	NA	NA	109	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	16.1913557184073	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGCTAAAAAAGAAAAAGAAG	107523135	False	NA	7	True	ATTAAA	-12	NA	107523151	107773066	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_107523253_107526326_107526399_107645835_107645910_107710451_107710623_107716606_107716850_107728764_107728961_107732955_107733024_107744629_107744711_107747964_107748040_107755597_107755679_107772627
transcript_146730.known	chr3	-	5292	11	FSM	ENSG00000196776.17	ENST00000361309.6	5292	11	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_3	27.3685951411467	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTCATAATTATTTTT	-108088336	True	NA	NA	False	ATTAAA	-19	NA	108091031	108043090	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_108047293_108049618_108049652_108050577_108050603_108051938_108051971_108057476_108057570_108058336_108058430_108059451_108059545_108060744_108060853_108071092_108071183_108079990_108080345_108090862
transcript_146735.known	chr3	-	5228	9	FSM	ENSG00000196776.17	ENST00000355354.13	5228	9	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	45.766902615318	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTCATAATTATTTTT	-108088330	True	NA	NA	False	ATTAAA	-19	NA	108091025	108043090	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_108047293_108051938_108051971_108057476_108057570_108058336_108058430_108059451_108059545_108060744_108060853_108071092_108071183_108079990_108080345_108090862
transcript_146736.nnic	chr3	-	1228	8	NIC	ENSG00000196776.17	novel	5292	11	NA	NA	-16	-2	combination_of_known_splicesites	FALSE	canonical	3	27	junction_1	52.8849347785417	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGTTTGCCCAATTGA	-108088352	True	NA	-25	True	AATAAA	-13	NA	108091047	108047080	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_108047293_108057476_108057570_108058336_108058430_108059451_108059545_108060744_108060853_108071092_108071183_108079990_108080345_108090862
transcript_146737.known	chr3	-	3057	11	FSM	ENSG00000114446.5	ENST00000264538.4	3057	11	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_4	30.2927384037825	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTATTTTCTTCCATC	-108216778	True	NA	NA	False	AATAAA	-16	NA	108222424	108160811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_108162656_108163662_108163730_108165430_108165494_108166853_108166986_108167792_108167865_108191520_108191644_108206627_108206697_108213930_108214022_108218534_108218654_108219409_108219573_108222110
transcript_146741.nic	chr3	-	1188	10	ISM	ENSG00000114446.5	ENST00000264538.4	3057	11	-22	2898	-11	1725	5prime_fragment	FALSE	canonical	3	287	junction_3	31.9192654391175	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGTAAAACAAGAAATGGAAG	-108216800	True	NA	5	True	NA	NA	NA	108222446	108163709	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_108163730_108165430_108165494_108166853_108166986_108167792_108167865_108191520_108191644_108206627_108206697_108213930_108214022_108218534_108218654_108219409_108219573_108222110
transcript_146742.nic	chr3	-	1164	9	ISM	ENSG00000114446.5	ENST00000264538.4	3057	11	-22	4623	-11	0	5prime_fragment	FALSE	canonical	3	287	junction_2	29.0817812384317	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGTACACACTGATGCTC	-108216800	True	NA	NA	False	NA	NA	NA	108222446	108165434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_108165494_108166853_108166986_108167792_108167865_108191520_108191644_108206627_108206697_108213930_108214022_108218534_108218654_108219409_108219573_108222110
transcript_146743.known	chr3	-	755	4	FSM	ENSG00000114446.5	ENST00000465024.1	755	4	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_3	4.89897948556636	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGCTGAGTATCATCATT	-108216714	True	NA	NA	False	AATATA	-41	NA	108222360	108213798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_108214022_108218534_108218654_108219409_108219573_108222110
transcript_146746.known	chr3	-	4066	21	FSM	ENSG00000163507.15	ENST00000295746.13	4066	21	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_7	10.3898989407982	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGACAAAACGTTAAAGAAA	-108587624	True	NA	NA	False	AATAAA	-19	NA	108589438	108549863	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_108551320_108552233_108552374_108553647_108553731_108554375_108554490_108557217_108557415_108559756_108559868_108559953_108560029_108560648_108560842_108563125_108563245_108565354_108565455_108566496_108566639_108568154_108568315_108569388_108569608_108576270_108576347_108579280_108579427_108579565_108579689_108581414_108581512_108582107_108582203_108582976_108583084_108585064_108585213_108589273
transcript_146753.nic	chr3	-	2664	19	ISM	ENSG00000163507.15	ENST00000295746.13	4066	21	-194	3784	12	-2532	5prime_fragment	FALSE	canonical	3	36	junction_5	7.44962506306505	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGGCTTCTTATTTAA	-108589543	True	NA	NA	False	NA	NA	NA	108589632	108553647	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_108553731_108554375_108554490_108557217_108557415_108559756_108559868_108559953_108560029_108560648_108560842_108563125_108563245_108565354_108565455_108566496_108566639_108568154_108568315_108569388_108569608_108576270_108576347_108579280_108579427_108579565_108579689_108581414_108581512_108582107_108582203_108582976_108583084_108585064_108585213_108589273
transcript_146755.nic	chr3	-	2766	19	ISM	ENSG00000163507.15	ENST00000295746.13	4066	21	-354	3842	-148	-2590	5prime_fragment	FALSE	canonical	3	36	junction_5	7.44962506306505	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAACAGAGAAAAGAAGT	-108589771	False	NA	NA	False	AATAGA	-5	NA	108589792	108553705	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_108553731_108554375_108554490_108557217_108557415_108559756_108559868_108559953_108560029_108560648_108560842_108563125_108563245_108565354_108565455_108566496_108566639_108568154_108568315_108569388_108569608_108576270_108576347_108579280_108579427_108579565_108579689_108581414_108581512_108582107_108582203_108582976_108583084_108585064_108585213_108589273
transcript_146761.nic	chr3	-	2575	18	ISM	ENSG00000163507.15	ENST00000295746.13	4066	21	-188	4512	18	-3260	5prime_fragment	FALSE	canonical	3	36	junction_4	6.5518955761015	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAATCTCTAGTTCTATA	-108589605	False	NA	28	True	AAAAAG	-33	NA	108589626	108554375	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_108554490_108557217_108557415_108559756_108559868_108559953_108560029_108560648_108560842_108563125_108563245_108565354_108565455_108566496_108566639_108568154_108568315_108569388_108569608_108576270_108576347_108579280_108579427_108579565_108579689_108581414_108581512_108582107_108582203_108582976_108583084_108585064_108585213_108589273
transcript_146764.known	chr3	+	5304	33	FSM	ENSG00000198919.13	ENST00000361582.8	5304	33	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	25.2475246311396	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTATTTTATCTGTGTAT	108587509	True	NA	4	True	AATAAA	-16	NA	108589721	108694840	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_108589840_108605334_108605439_108608088_108608159_108611173_108611330_108616540_108616658_108624443_108624525_108625844_108625970_108629061_108629177_108632952_108633073_108634870_108634973_108636615_108636709_108637495_108637549_108642437_108642515_108644163_108644782_108646616_108646650_108647942_108648113_108648917_108648963_108651136_108651163_108654144_108654311_108661876_108661973_108662129_108662258_108669680_108669750_108672559_108672657_108674077_108674182_108675785_108675874_108677496_108677599_108684215_108684342_108686444_108686585_108687975_108688097_108688592_108688737_108688822_108688925_108690786_108690904_108693359
transcript_146773.nic	chr3	+	2207	16	ISM	ENSG00000198919.13	ENST00000361582.8	5304	33	-55	46728	-38	0	5prime_fragment	FALSE	canonical	3	112	junction_1	20.0860371623894	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAAGCTCTCATTAATAT	108589520	False	NA	NA	False	NA	NA	NA	108589666	108648112	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_108589840_108605334_108605439_108608088_108608159_108611173_108611330_108616540_108616658_108624443_108624525_108625844_108625970_108629061_108629177_108632952_108633073_108634870_108634973_108636615_108636709_108637495_108637549_108642437_108642515_108644163_108644782_108646616_108646650_108647942
transcript_146774.nic	chr3	+	3181	16	ISM	ENSG00000198919.13	ENST00000361582.8	5304	33	-201	45900	-184	828	intron_retention	FALSE	canonical	3	112	junction_1	20.0860371623894	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGACTAAGAATAAAA	108589374	True	NA	21	True	AATAAA	-42	NA	108589520	108648940	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_108589840_108605334_108605439_108608088_108608159_108611173_108611330_108616540_108616658_108624443_108624525_108625844_108625970_108629061_108629177_108632952_108633073_108634870_108634973_108636615_108636709_108637495_108637549_108642437_108642515_108644163_108644782_108646616_108646650_108647942
transcript_146777.known	chr3	+	2076	16	FSM	ENSG00000198919.13	ENST00000479138.5	2076	16	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	39.6751251485809	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAAGCTCTCATTAATAT	108590025	False	NA	NA	False	NA	NA	NA	108590054	108648112	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_108590097_108605334_108605439_108608088_108608159_108611173_108611330_108616540_108616658_108624443_108624525_108625844_108625970_108629061_108629177_108632952_108633073_108634870_108634973_108636615_108636709_108637495_108637549_108642437_108642515_108644163_108644782_108646616_108646650_108647942
transcript_146788.known	chr3	+	5164	31	FSM	ENSG00000198919.13	ENST00000495008.5	5164	31	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_26	47.5607214224324	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTGTGAGATAAATGTTC	108587492	True	NA	-83	True	ATTAAA	-14	NA	108589704	108694032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_108589840_108605334_108605439_108608088_108608159_108611173_108611330_108616540_108616658_108624443_108624525_108625844_108625970_108629061_108629177_108632952_108633073_108634870_108634959_108636615_108636709_108637495_108637549_108642437_108642515_108644163_108644782_108646616_108646650_108647942_108648963_108651136_108651163_108654144_108654311_108661876_108661973_108662129_108662258_108669680_108669750_108672559_108672657_108674077_108674182_108675785_108675874_108677496_108677599_108684215_108684342_108687975_108688097_108688592_108688737_108688822_108688925_108690786_108690904_108693359
transcript_146789.known	chr3	-	1383	9	FSM	ENSG00000163530.4	ENST00000478945.1	1383	9	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_8	20.2530861845794	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTCAGTGTGTGTTAAA	-109316494	False	NA	-4	True	AATAAA	-22	NA	109316517	109293787	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_109294005_109300370_109300436_109304474_109304671_109308031_109308294_109309025_109309080_109309169_109309331_109312544_109312693_109314509_109314556_109316283
transcript_146790.nnic	chr3	-	1374	9	NNC	ENSG00000163530.4	novel	1383	9	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_8	24.3307290273021	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTCAGTGTGTGTTAAA	NA	False	NA	-4	True	AATAAA	-22	NA	109316561	109293787	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_109294005_109300370_109300436_109304474_109304671_109308031_109308294_109309025_109309080_109309169_109309331_109312544_109312693_109314509_109314556_109316336
transcript_146835.nic	chr3	-	2537	7	NIC	ENSG00000121570.13	novel	2788	7	NA	NA	-36	-214	combination_of_known_junctions	FALSE	canonical	3	244	junction_6	1813.83663358455	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATACTATGTGTATTGTTC	-109266374	True	NA	-11	True	AATAAA	-17	NA	109337582	109326357	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_109328025_109328889_109329089_109330523_109330813_109331733_109331785_109331870_109332032_109333869_109333921_109337463
transcript_146838.known	chr3	-	2817	7	FSM	ENSG00000121570.13	ENST00000335658.7	2788	7	-26	-3	-26	3	multi-exon	FALSE	canonical	3	3947	junction_6	704.701453729797	3087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACAGTTTATTTACTC	-109266364	True	NA	-2	True	AATAAA	-21	NA	109337572	109326140	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_109328025_109328889_109329089_109330523_109330813_109331733_109331785_109331870_109332032_109333869_109333994_109337463
transcript_14684.known	chr1	+	1803	3	FSM	ENSG00000160688.19	ENST00000368431.7	1803	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	219.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATCAGCACTGTGCTA	154974979	True	NA	18	True	AATAAA	-18	NA	154983366	154989012	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154983398_154983841_154984067_154987465
transcript_14686.nic	chr1	+	1363	3	ISM	ENSG00000160688.19	ENST00000315144.14	1730	8	-193	4101	-172	-2	5prime_fragment	FALSE	canonical	3	474	junction_1	190	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTCATCAGCACTGTGC	154983128	False	NA	16	True	AATAAA	-16	NA	154983165	154989010	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_154983398_154983841_154984067_154988104
transcript_146865.known	chr3	-	1087	6	FSM	ENSG00000121570.13	ENST00000463966.5	1087	6	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_2	1973.94107308197	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTTGTATTTTTAGTA	-109266314	True	NA	NA	False	NA	NA	NA	109337522	109327524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_109328025_109328889_109329082_109331733_109331785_109331870_109332032_109333869_109333994_109337463
transcript_14687.known	chr1	+	757	3	FSM	ENSG00000160688.19	ENST00000487371.1	757	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	413.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGCACTGGTCAACCTT	154975043	False	NA	NA	False	NA	NA	NA	154983430	154988433	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154983634_154983841_154984067_154988104
transcript_14689.known	chr1	+	2189	7	FSM	ENSG00000160688.19	ENST00000292180.8	2189	7	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_2	144.019288831585	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGCTCTAGCTGTGTC	154974956	True	NA	22	True	AATAAA	-18	NA	154983343	154993111	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_154984067_154988104_154988850_154989559_154989708_154990158_154990258_154990338_154990529_154992712_154992787_154992901
transcript_146903.known	chr3	-	1225	5	FSM	ENSG00000121570.13	ENST00000478791.1	1225	5	0	0	0	0	multi-exon	FALSE	canonical	3	3947	junction_4	407.581510252857	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTGGGGACCACAGTTT	-109266307	True	NA	NA	False	NA	NA	NA	109337515	109329975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_109330813_109331733_109331785_109331870_109332032_109333869_109333994_109337463
transcript_146936.known	chr3	-	680	2	FSM	ENSG00000121570.13	ENST00000489281.1	680	2	0	0	0	0	multi-exon	FALSE	canonical	3	3947	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATTACAGGCTGGTTTT	-109266337	True	NA	NA	False	AGTAAA	-13	NA	109337545	109333395	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_109333994_109337463
transcript_146940.nnic	chr3	-	2730	3	NIC	ENSG00000242242.7	novel	1415	4	NA	NA	-76500	1081	combination_of_known_splicesites	FALSE	canonical	3	83	junction_2	2.5	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCAGAGTATCTGCATAA	-110966084	True	NA	NA	False	AATAAA	-23	NA	110969976	110891041	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_110892604_110893137_110893831_110969501
transcript_146943.nnic	chr3	-	729	2	NIC	ENSG00000242242.7	novel	568	3	NA	NA	-76500	188	combination_of_known_splicesites	FALSE	canonical	3	83	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCATCAATGAAAAAGATAG	-110966084	True	NA	NA	False	NA	NA	NA	110969976	110893576	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_110893831_110969501
transcript_146944.known	chr3	+	5197	6	FSM	ENSG00000177707.11	ENST00000485303.6	5197	6	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_5	13.8506317545446	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCTGTAATAAGTTCAT	111069031	True	NA	NA	False	AATAAA	-25	NA	111071815	111137560	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_111072178_111112029_111112372_111118655_111118953_111122120_111122239_111126183_111126336_111133634
transcript_146947.known	chr3	+	5543	18	FSM	ENSG00000144824.21	ENST00000393925.7	5543	18	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_5	30.564810034691	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTCACATTTGAAAATAAA	111855384	True	NA	4	True	ATTAAA	-12	NA	111859795	111976247	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_111859879_111884063_111885413_111913318_111913703_111919071_111919216_111920281_111920420_111932268_111932398_111939474_111939631_111940534_111940646_111945267_111945358_111948931_111949076_111952571_111952713_111953929_111954030_111962107_111962313_111966612_111966704_111967677_111967825_111969689_111969910_111973731_111973818_111974422
transcript_146948.nic	chr3	+	5570	17	NIC	ENSG00000144824.21	novel	5543	18	NA	NA	-68	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_5	36.0633123825308	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATCTGTAGTATGATGGA	111855270	True	NA	46	True	AATAAA	-23	NA	111859681	111976289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_111859879_111884063_111885413_111913318_111913703_111919071_111919216_111920281_111920420_111939474_111939631_111940534_111940646_111945267_111945358_111948931_111949076_111952571_111952713_111953929_111954030_111962107_111962313_111966612_111966704_111967677_111967825_111969689_111969910_111973731_111973818_111974422
transcript_146951.nic	chr3	+	3398	15	ISM	ENSG00000144824.21	ENST00000393925.7	5543	18	-57	8494	-11	0	5prime_fragment	FALSE	canonical	3	102	junction_5	28.7193492337163	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAGAAACTAGCCAGAGG	111855327	True	NA	NA	False	AAGAAA	-34	NA	111859738	111967753	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_111859879_111884063_111885413_111913318_111913703_111919071_111919216_111920281_111920420_111932268_111932398_111939474_111939631_111940534_111940646_111945267_111945358_111948931_111949076_111952571_111952713_111953929_111954030_111962107_111962313_111966612_111966704_111967677
transcript_146961.nic	chr3	+	2580	8	ISM	ENSG00000144824.21	ENST00000393925.7	5543	18	-114	35630	-68	-4823	5prime_fragment	FALSE	canonical	3	102	junction_5	26.1791317422009	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAATTTAATAATGATGT	111855270	True	NA	NA	False	AAGAAA	-2	NA	111859681	111940617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_111859879_111884063_111885413_111913318_111913703_111919071_111919216_111920281_111920420_111932268_111932398_111939474_111939631_111940534
transcript_146964.nic	chr3	+	2435	7	ISM	ENSG00000144824.21	ENST00000393925.7	5543	18	-51	36616	-5	-5809	5prime_fragment	FALSE	canonical	3	102	junction_5	24.822145130687	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTTTCCAGGTGTCATT	111855333	True	NA	NA	False	NA	NA	NA	111859744	111939631	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_111859879_111884063_111885413_111913318_111913703_111919071_111919216_111920281_111920420_111932268_111932398_111939474
transcript_146965.nic	chr3	+	2451	7	NIC	ENSG00000144824.21	novel	5543	18	NA	NA	-68	-4823	combination_of_known_junctions	FALSE	canonical	3	58	junction_5	38.6307304271267	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAATTTAATAATGATGT	111855270	True	NA	NA	False	AAGAAA	-2	NA	111859681	111940617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_111859879_111884063_111885413_111913318_111913703_111919071_111919216_111920281_111920420_111939474_111939631_111940534
transcript_146971.nic	chr3	+	2033	4	ISM	ENSG00000144824.21	ENST00000393925.7	5543	18	-114	57073	-68	1511	5prime_fragment	FALSE	canonical	3	124	junction_2	26.1661358757205	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAGACATAAATGATCAG	111855270	True	NA	NA	False	NA	NA	NA	111859681	111919174	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_111859879_111884063_111885413_111913318_111913703_111919071
transcript_146972.known	chr3	+	801	6	FSM	ENSG00000144827.9	ENST00000494817.1	801	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	115.976894250536	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGATGACATTGTACCTT	111975523	True	NA	NA	False	NA	NA	NA	111979052	111991540	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_111979204_111981783_111981968_111986263_111986376_111986913_111987052_111990699_111990752_111991376
transcript_146974.known	chr3	+	2604	5	FSM	ENSG00000144827.9	ENST00000273359.8	2604	5	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_4	15.2704780540755	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGAGTCTTATGAGTCTT	111975496	True	NA	21	True	AATAAA	-24	NA	111979025	111993368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_111979204_111981783_111981968_111986263_111986376_111986913_111987052_111991376
transcript_146977.known	chr3	+	1339	4	FSM	ENSG00000144827.9	ENST00000491580.1	1339	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	107.079409785448	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACTTAAAATTGAGCTTT	111975480	True	NA	NA	False	TATAAA	-15	NA	111979009	111992271	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_111979204_111986263_111986376_111986913_111987052_111991376
transcript_146978.known	chr3	+	1488	5	FSM	ENSG00000144834.14	ENST00000393917.6	1488	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.35607132140714	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTGTAAAGTTCATTCTT	NA	False	NA	8	True	AATAAA	-20	NA	111998738	112013887	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_111999115_111999246_111999603_112000771_112000947_112011762_112011866_112013409
transcript_146979.known	chr3	+	1164	4	FSM	ENSG00000144834.14	ENST00000455401.6	1164	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	2.05480466765633	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTACAGTGTAAAGTTC	111999146	False	NA	2	True	AATAAA	-14	NA	111999188	112013881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_111999603_112000771_112000947_112011762_112011866_112013409
transcript_146982.known	chr3	+	2237	6	FSM	ENSG00000114529.13	ENST00000264848.10	2237	6	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_4	8.21218606705912	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGCATTCCCATTGGC	112085015	True	NA	29	True	AATACA	-17	NA	112086388	112118210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_112086546_112093359_112093490_112102837_112102966_112109542_112109614_112112963_112113146_112116641
transcript_146985.known	chr3	+	965	4	FSM	ENSG00000114529.13	ENST00000484828.1	965	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	36.1601376595216	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAAGGCACTTTAGAAGA	112085063	True	NA	NA	False	NA	NA	NA	112086436	112117239	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_112086546_112093359_112093490_112102837_112102966_112116641
transcript_146995.known	chr3	+	1524	7	FSM	ENSG00000091972.18	ENST00000473539.5	1524	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	129.364364833941	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTTACTGCTTTGCTAA	112328560	True	NA	NA	False	NA	NA	NA	112333155	112362132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_112333225_112335942_112336018_112340901_112340984_112344961_112345289_112347557_112347831_112349711_112349820_112361542
transcript_147001.known	chr3	+	2129	6	FSM	ENSG00000091972.18	ENST00000315711.12	2129	6	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	81.6465553468118	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGGCTTATGATATTCT	112328560	True	NA	20	True	ATTAAA	-16	NA	112333155	112362812	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_112333225_112340901_112340984_112344961_112345289_112347557_112347831_112349711_112349820_112361542
transcript_147004.nnic	chr3	+	2216	6	NNC	ENSG00000091972.18	novel	2129	6	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_3	139.538668475803	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGGCTTATGATATTCT	112328466	True	NA	20	True	ATTAAA	-16	NA	112333061	112362812	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_112333225_112344961_112345289_112347348_112347424_112347557_112347831_112349711_112349820_112361542
transcript_147006.known	chr3	+	942	5	FSM	ENSG00000091972.18	ENST00000498096.5	942	5	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	115.465362771699	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTGTCACAGGGAGTT	112328472	True	NA	NA	False	NA	NA	NA	112333067	112349819	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_112333225_112340901_112340984_112344961_112345289_112347562_112347831_112349711
transcript_14701.known	chr1	+	3594	4	FSM	ENSG00000160685.14	ENST00000368426.3	3594	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	11.8415464455544	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTGTGTCCACTTTTGG	155002495	True	NA	5	True	AAGAAA	-20	NA	155002656	155018522	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155002687_155002842_155002944_155014654_155015815_155016219
transcript_147010.known	chr3	+	2017	5	FSM	ENSG00000091972.18	ENST00000478595.1	2017	5	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	117.067021402272	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTGGCTTATGATAT	112328582	True	NA	17	True	ATTAAA	-13	NA	112333177	112362809	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_112333225_112344961_112345289_112347562_112347831_112349711_112349820_112361542
transcript_147017.known	chr3	-	1568	12	FSM	ENSG00000144848.11	ENST00000283290.10	1568	12	0	0	0	0	multi-exon	FALSE	canonical	3	605	junction_9	49.4373298912558	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCTTGTGTCTTATTA	-112554233	True	NA	-3	True	AATAAA	-17	NA	112561962	112532509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_112532781_112534268_112534338_112536474_112536603_112537734_112537891_112538145_112538181_112541802_112541885_112544056_112544107_112548532_112548641_112550191_112550263_112553279_112553330_112558375_112558418_112561456
transcript_147021.known	chr3	-	3010	11	FSM	ENSG00000144848.11	ENST00000402314.6	3010	11	0	0	0	0	multi-exon	FALSE	canonical	3	605	junction_8	31.7332633052449	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCTTGTGTCTTATTA	-112554187	True	NA	-3	True	AATAAA	-17	NA	112561916	112532509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_112534338_112536474_112536603_112537734_112537891_112538145_112538181_112541802_112541885_112544056_112544107_112548532_112548641_112550191_112550263_112553279_112553330_112558375_112558418_112561456
transcript_147025.known	chr3	+	2444	8	FSM	ENSG00000138459.9	ENST00000261034.6	2444	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	86.6119659923571	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGTGTTGCCACTCTG	112558442	True	NA	3	True	ATTAAA	-17	NA	112562071	112584156	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_112562274_112563384_112563534_112569170_112569270_112570539_112570671_112573888_112573957_112580545_112580707_112581178_112581327_112582670
transcript_147028.known	chr3	+	4366	7	FSM	ENSG00000138459.9	ENST00000492406.6	4366	7	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_3	30.8526966226437	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCGAAGTTCTGATATGT	112558415	True	NA	NA	False	AATAAA	-19	NA	112562044	112585579	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_112562274_112563384_112563534_112569170_112569270_112570539_112570671_112573888_112573957_112580545_112581327_112582670
transcript_147033.known	chr3	-	12301	8	FSM	ENSG00000091986.16	ENST00000206423.8	12301	8	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_5	7.69839633446142	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGCTGTGTGGAGTCTGG	-112640846	False	NA	NA	False	AATAAA	-13	NA	112641143	112596796	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_112605764_112607175_112607257_112609977_112610082_112616709_112616859_112618967_112619105_112630112_112630270_112638027_112639917_112640326
transcript_147034.nic	chr3	-	2725	2	ISM	ENSG00000091986.16	ENST00000206423.8	12301	8	-157	41369	0	1234	5prime_fragment	FALSE	canonical	3	18	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAAGAGCAAGAAGAAAAA	-112641003	True	NA	99	True	AAAAAG	-16	NA	112641300	112638165	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_112639917_112640326
transcript_147039.known	chr3	-	4820	9	FSM	ENSG00000163608.15	ENST00000314400.10	4820	9	0	0	0	0	multi-exon	TRUE	canonical	3	72	junction_7	17.6913644188344	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGATTTGTTGGCCTCTTT	-113016129	True	NA	-4	True	ATTAAA	-18	NA	113019671	113002443	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_113006005_113008170_113008431_113010642_113010705_113011044_113011407_113012733_113012812_113013271_113013404_113013952_113014033_113017447_113017603_113019541
transcript_14704.known	chr1	+	3777	3	FSM	ENSG00000160685.14	ENST00000535420.6	3606	3	-172	1	0	0	multi-exon	FALSE	canonical	3	24	junction_1	7	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTGTGTCCACTTTTGG	155002614	False	NA	5	True	AAGAAA	-20	NA	155002629	155018522	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155002944_155014654_155015815_155016219
transcript_147044.known	chr3	-	1382	8	FSM	ENSG00000163608.15	ENST00000462295.5	1382	8	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_4	38.5243098442995	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAGAACTGCTAAGATCT	-113016124	True	NA	NA	False	NA	NA	NA	113019666	113005480	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_113006005_113008170_113008431_113010642_113010705_113011044_113011166_113012733_113012812_113013271_113013404_113013952_113014033_113019541
transcript_147045.known	chr3	-	2056	8	FSM	ENSG00000163608.15	ENST00000473284.5	2056	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_7	25.392430175233	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTGAATAATTTTATG	NA	False	NA	NA	False	NA	NA	NA	113019861	113005242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_113006005_113008170_113008431_113010642_113010705_113011044_113011407_113012733_113012812_113013271_113013404_113013952_113014033_113019541
transcript_147047.known	chr3	-	1817	8	FSM	ENSG00000163608.15	ENST00000469169.5	1817	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	44.7546600013533	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTGAATAATTTTATG	-113016122	True	NA	NA	False	NA	NA	NA	113019664	113005242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_113006005_113008170_113008431_113010642_113010705_113011044_113011407_113012733_113012812_113013271_113013362_113013952_113014033_113019541
transcript_147050.known	chr3	-	4672	7	FSM	ENSG00000163608.15	ENST00000383675.6	4672	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	41.3753147017236	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGATTTGTTGGCCTCTTT	-113016191	True	NA	-4	True	ATTAAA	-18	NA	113019733	113002443	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_113006005_113008170_113008431_113010642_113010705_113011044_113011407_113013952_113014033_113017447_113017603_113019541
transcript_147052.known	chr3	+	1921	6	FSM	ENSG00000163607.18	ENST00000383678.8	1921	6	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	15.9423963067037	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTTTTCTTTAGA	112988760	True	NA	3	True	ATTAAA	-13	NA	112990983	113001969	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_112991336_112993025_112993125_112995134_112995266_112996891_112996992_112999445_112999565_113000849
transcript_147055.known	chr3	-	1576	6	FSM	ENSG00000163608.15	ENST00000489848.5	1576	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	47.6126033734767	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTGTTAATATGAAAAATCT	-113016128	True	NA	NA	False	NA	NA	NA	113019670	113005321	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_113006005_113008170_113008431_113010642_113010705_113011044_113011407_113013952_113014033_113019541
transcript_147056.known	chr3	-	1048	6	FSM	ENSG00000163608.15	ENST00000461381.5	1048	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	51.3871579288055	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTATCAAAACTTCAAAGCA	-113016129	True	NA	-60	True	CATAAA	-35	NA	113019671	113005943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_113006005_113008170_113008431_113011044_113011407_113013952_113014033_113017447_113017603_113019541
transcript_147059.nic	chr3	+	762	5	ISM	ENSG00000163607.18	ENST00000383678.8	1921	6	-64	2508	-64	-1458	5prime_fragment	FALSE	canonical	3	94	junction_2	12.794041581924	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGACAAATCTTCCAAGGGA	112988696	True	NA	NA	False	CATAAA	-34	NA	112990919	112999461	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_112991336_112993025_112993125_112995134_112995266_112996891_112996992_112999445
transcript_147060.known	chr3	+	715	5	FSM	ENSG00000163607.18	ENST00000488781.5	715	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	46.9434500223407	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTCCCGGTTTAGCTGAA	112988785	True	NA	NA	False	NA	NA	NA	112991008	113000919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_112991336_112993025_112993125_112996891_112996992_112999445_112999565_113000849
transcript_147062.known	chr3	-	947	5	FSM	ENSG00000163608.15	ENST00000460410.5	947	5	0	0	0	0	multi-exon	TRUE	canonical	1	5	junction_3	46.35393726535	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTTGCTTTGATACAGC	NA	False	NA	NA	False	AGTAAA	-21	NA	113019832	113011044	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_113011407_113012733_113012812_113013271_113013404_113013948_113014033_113019541
transcript_147068.known	chr3	+	2173	4	FSM	ENSG00000144857.15	ENST00000485230.5	2173	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	3.85861230093008	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGACTGCCACTTGGTG	113211315	True	NA	NA	False	AGTAAA	-18	NA	113211564	113252005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_113212017_113216186_113216279_113249721_113249900_113250554
transcript_147072.nic	chr3	-	3074	18	ISM	ENSG00000285943.1	ENST00000649772.1	6837	39	-14	82986	-14	-82986	5prime_fragment	FALSE	canonical	0	0	junction_17	26.5616733537155	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGGCTTTCAGGAATAT	-113513829	True	NA	0	True	AATAAA	-19	NA	113515165	113444886	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_113445361_113446588_113446677_113448037_113448141_113450335_113450517_113453465_113453951_113457135_113457358_113460616_113460765_113465652_113465785_113468138_113468405_113468761_113468900_113469098_113469239_113488944_113489064_113493205_113493313_113494048_113494143_113499438_113499583_113503179_113503228_113506506_113506606_113515079
transcript_147075.known	chr3	-	5417	18	FSM	ENSG00000163611.11	ENST00000295872.8	5417	18	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_17	20.300510502044	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCTTGCCAATTTTAT	-113513820	True	NA	NA	False	AATAAA	-21	NA	113515156	113442717	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_113445361_113446588_113446677_113448037_113448141_113450335_113450517_113453465_113453951_113457135_113457358_113460616_113460765_113465652_113465785_113468138_113468405_113468761_113468900_113469098_113469239_113488944_113489064_113493205_113493313_113494048_113494143_113499438_113499583_113503179_113503228_113506506_113506606_113514896
transcript_147076.nic	chr3	-	3347	18	NIC	ENSG00000163611.11	novel	5417	18	NA	NA	0	618	intron_retention	FALSE	canonical	0	0	junction_17	26.5616733537155	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTAAATGTGGTAACATT	-113513851	True	NA	-5	True	AATAAA	-20	NA	113515187	113444635	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_113445361_113446588_113446677_113448037_113448141_113450335_113450517_113453465_113453951_113457135_113457358_113460616_113460765_113465652_113465785_113468138_113468405_113468761_113468900_113469098_113469239_113488944_113489064_113493205_113493313_113494048_113494143_113499438_113499583_113503179_113503228_113506506_113506606_113515079
transcript_147082.known	chr3	-	13704	7	FSM	ENSG00000176542.10	ENST00000316407.9	13704	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	3.28718048721934	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTCTTCCCTGATCATT	-113694517	True	NA	0	True	AATAAA	-23	NA	113696642	113648384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_113661426_113664312_113664410_113670120_113670204_113673347_113673377_113674831_113674897_113677281_113677398_113696369
transcript_147084.known	chr3	-	962	5	FSM	ENSG00000121579.14	ENST00000493900.5	962	5	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_4	511.14723906131	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGTTCTTGTTTTTCTT	-113746282	False	NA	14	True	TTTAAA	-12	NA	113746300	113721655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_113721938_113722905_113722973_113723421_113723542_113723958_113724093_113745941
transcript_147089.known	chr3	-	958	5	FSM	ENSG00000121579.14	ENST00000481432.5	958	5	0	0	0	0	multi-exon	FALSE	canonical	1	20	junction_3	623.695588809156	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATAATCATGTTTGA	-113716388	True	NA	-33	True	NA	NA	NA	113746249	113721589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_113721938_113722905_113722973_113723421_113723542_113723980_113724096_113745941
transcript_147090.known	chr3	+	4575	15	FSM	ENSG00000114573.10	ENST00000273398.8	4575	15	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_12	22.1147286777341	217	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTTTTCTTTTTCTCTT	113741575	True	NA	11	True	AATAAA	-18	NA	113747034	113812056	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_113747114_113778740_113778836_113781049_113781179_113784223_113784439_113784695_113784834_113786231_113786384_113788712_113788876_113789731_113789841_113794871_113794995_113795089_113795205_113795875_113795940_113798242_113798447_113803582_113803678_113805353_113805526_113809334
transcript_147096.known	chr3	+	3807	18	FSM	ENSG00000178075.20	ENST00000358160.9	3807	18	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_13	5.70800445680386	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTAGTTTTTCTTCTTTT	113838516	True	NA	12	True	AATAAA	-16	NA	113838787	113947174	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_113838937_113844502_113844650_113869506_113869592_113875483_113875588_113876164_113876261_113882751_113882833_113901030_113901147_113904139_113904273_113908957_113909121_113915700_113915839_113930713_113930833_113933510_113933654_113934431_113934536_113936265_113936443_113938085_113938144_113939885_113939997_113940239_113940346_113945397
transcript_147107.known	chr3	+	4023	10	FSM	ENSG00000151576.10	ENST00000281273.8	4023	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	64.4132108219662	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTAGAGATTTCTCATT	114051666	True	NA	88	True	ATTAAA	-19	NA	114056736	114088422	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_114056865_114056998_114057107_114065236_114065458_114066227_114066284_114067986_114068064_114070625_114070839_114076742_114076943_114079905_114080058_114082676_114082795_114085672
transcript_147112.known	chr3	+	3844	9	FSM	ENSG00000151576.10	ENST00000485050.5	3844	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	62.7184930861704	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTACTGTGTTTGGCTTTCT	114051664	True	NA	15	True	AATAAA	-20	NA	114056734	114088349	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_114056865_114065236_114065458_114066227_114066284_114067986_114068064_114070625_114070839_114076742_114076943_114079905_114080058_114082676_114082795_114085672
transcript_147127.known	chr3	+	1046	6	FSM	ENSG00000151576.10	ENST00000493014.1	1046	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	86.2122961067619	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAACATGGGAAGACGTG	114051711	True	NA	NA	False	AATACA	-34	NA	114056781	114085952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_114056865_114070625_114070839_114076742_114076943_114079905_114080058_114082676_114082795_114085672
transcript_14713.known	chr1	+	2894	23	FSM	ENSG00000143537.14	ENST00000472434.5	2894	23	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	32.2807928461625	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGTTCCCCAGAGTTTGT	155049116	True	NA	20	True	AATAAA	-14	NA	155051353	155062768	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155051466_155052670_155052778_155053416_155053494_155053909_155053989_155054149_155054227_155054313_155054507_155055786_155055853_155055931_155056001_155056079_155056250_155056385_155056471_155056952_155057102_155057187_155057363_155057636_155057730_155057850_155058156_155058245_155058442_155058709_155058788_155059901_155059975_155060204_155060344_155060762_155060833_155061414_155061490_155061903_155061976_155062244_155062370_155062459
transcript_147134.known	chr3	+	1498	3	FSM	ENSG00000172020.13	ENST00000305124.11	1498	3	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_2	11.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCAATGGCTCTGTGTTT	115621890	False	NA	13	True	AATAAA	-17	NA	115623509	115721483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_115623720_115676012_115676611_115720793
transcript_147138.known	chr3	+	553	4	FSM	ENSG00000240922.1	ENST00000490351.1	553	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	2.05480466765633	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACTGTTATTTTTAGTAT	116359880	False	NA	NA	False	ATTAAA	-23	NA	116360023	116370090	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_116360094_116367941_116368036_116368142_116368272_116369830
transcript_147139.known	chr3	-	1487	7	FSM	ENSG00000144847.13	ENST00000491903.1	1487	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.05505046330389	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTGCTGTTACTTGGCC	-119034580	False	NA	NA	False	AGTAAA	-16	NA	119034728	118902390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_118902962_118904647_118904715_118905595_118905719_118926100_118926257_118928508_118928717_118930111_118930276_119034530
transcript_147140.known	chr3	-	3523	7	FSM	ENSG00000144847.13	ENST00000393775.7	3523	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.80871659105879	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTCCATCCTGTTAAAT	-119034698	True	NA	NA	False	TTTAAA	-29	NA	119034846	118900556	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_118902962_118904647_118904799_118905595_118905719_118926100_118926257_118928508_118928717_118930111_118930276_119034530
transcript_147142.nnic	chr3	-	2878	4	NNC	ENSG00000144847.13	novel	3206	7	NA	NA	15473	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	0.942809041582063	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAATAAGTTGTCATTAA	NA	False	NA	NA	False	AATAAA	-12	NA	118914780	118900635	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_118902962_118904647_118904799_118905595_118905719_118914502
transcript_147143.known	chr3	+	2028	8	FSM	ENSG00000114638.8	ENST00000264234.8	2028	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.63887656499994	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTTTCATTTTTACCAA	119173569	True	NA	NA	False	AGTAAA	-18	NA	119173597	119205143	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_119173639_119186713_119186811_119187774_119187976_119190244_119190320_119190981_119191105_119194218_119194399_119199056_119199141_119203916
transcript_147147.known	chr3	-	2385	9	FSM	ENSG00000121578.13	ENST00000359213.7	2385	9	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_7	54.2584958785258	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGTTCCTTCGTGTT	-119237982	True	NA	-4	True	AATAAA	-41	NA	119240946	119211741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_119212682_119216239_119216345_119218649_119218773_119224057_119224246_119226808_119227042_119229846_119230245_119235144_119235228_119236852_119237071_119240849
transcript_14715.known	chr1	+	2946	23	FSM	ENSG00000143537.14	ENST00000449910.6	2946	23	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_19	21.2442019314089	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATCTTGGGAGCGTTCCC	155049048	True	NA	10	True	AATAAA	-4	NA	155051285	155062758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155051466_155052670_155052778_155053416_155053494_155053909_155053989_155054149_155054227_155054313_155054507_155055789_155055853_155055931_155056001_155056079_155056250_155056385_155056471_155056952_155057102_155057187_155057363_155057636_155057730_155057850_155058156_155058245_155058442_155058709_155058788_155059901_155059975_155060204_155060344_155060762_155060833_155061417_155061490_155061903_155061976_155062244_155062370_155062459
transcript_147153.nic	chr3	-	2323	8	NIC	ENSG00000121578.13	novel	2385	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_7	53.3972406227368	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGTTCCTTCGTGTT	-119237918	True	NA	-4	True	AATAAA	-41	NA	119240882	119211741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_119212682_119216239_119216345_119218649_119218773_119224057_119224246_119226808_119227042_119229846_119230245_119236852_119237071_119240764
transcript_147154.known	chr3	-	2234	8	FSM	ENSG00000121578.13	ENST00000393765.7	2234	8	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_6	27.3361538282628	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGTTCCTTCGTGTT	-119237914	True	NA	-4	True	AATAAA	-41	NA	119240878	119211741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_119212682_119216239_119216345_119218649_119218773_119224057_119224246_119226808_119227042_119229846_119230245_119236852_119237071_119240849
transcript_147155.nic	chr3	-	2260	8	NIC	ENSG00000121578.13	novel	2385	9	NA	NA	-20	0	combination_of_known_junctions	TRUE	canonical	3	19	junction_2	47.0921805546075	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGTTCCTTCGTGTT	NA	False	NA	-4	True	AATAAA	-41	NA	119240966	119211741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_119212682_119216239_119216345_119218711_119218773_119224057_119224246_119226808_119227042_119229846_119230245_119236852_119237071_119240849
transcript_147158.known	chr3	-	884	5	FSM	ENSG00000121578.13	ENST00000475803.5	884	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	43.2976615996753	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTACCTGCTGGAACAT	-119237914	True	NA	NA	False	NA	NA	NA	119240878	119226885	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_119227042_119229846_119230245_119235144_119235228_119236852_119237071_119240849
transcript_147163.known	chr3	+	9307	12	FSM	ENSG00000031081.11	ENST00000264245.9	9307	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	4.72552415213346	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTATTGGAAAGCCACATG	119294219	True	NA	NA	False	AGTAAA	-17	NA	119294382	119420714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_119295005_119365315_119365419_119368371_119368517_119380903_119380987_119382291_119382400_119383083_119383227_119390784_119390984_119393466_119393592_119399198_119399262_119401821_119402398_119409495_119409777_119413855
transcript_147173.known	chr3	-	4853	9	FSM	ENSG00000176142.13	ENST00000319172.10	4853	9	0	0	0	0	multi-exon	FALSE	canonical	2	136	junction_1	24.4028686838249	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGACAGATGTCTTGGAAC	-119461825	True	NA	NA	False	AATAAA	-29	NA	119463615	119428948	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_119432215_119434761_119434883_119436790_119436979_119437754_119438104_119447017_119447173_119452446_119452531_119458017_119458241_119461961_119462149_119463335
transcript_1472.known	chr1	+	1404	7	FSM	ENSG00000157916.20	ENST00000378512.5	1404	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	383.436399187952	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTGAGATTATTTTGAC	2381622	True	NA	9	True	TATAAA	-18	NA	2391889	2403751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_2391959_2395783_2395872_2397115_2397221_2399414_2399515_2400856_2400936_2402096_2402343_2403034
transcript_147200.known	chr3	-	935	5	FSM	ENSG00000176142.13	ENST00000468676.5	935	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	64.3947785150318	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTACTCCAGTTTTACC	-119461875	True	NA	NA	False	NA	NA	NA	119463665	119447017	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_119447173_119452446_119452531_119458017_119458241_119461961_119462105_119463335
transcript_147207.known	chr3	+	3508	11	FSM	ENSG00000163389.12	ENST00000295588.9	3508	11	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_7	11.8697093477473	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGCTTTGTCTTTATTTA	119467154	True	NA	13	True	AATGAA	-24	NA	119468962	119494708	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_119469107_119469819_119469911_119471308_119471453_119477312_119477449_119480050_119480173_119485327_119485388_119486832_119486933_119488928_119488988_119490550_119490719_119491517_119491575_119492281
transcript_14721.known	chr1	+	2877	22	FSM	ENSG00000143537.14	ENST00000355956.6	2877	22	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_20	31.3922589646316	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATCTTGGGAGCGTTCCC	155049048	True	NA	10	True	AATAAA	-4	NA	155051285	155062758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155051466_155052670_155052778_155053416_155053494_155053909_155053989_155054149_155054227_155054313_155054507_155055789_155055853_155055931_155056001_155056079_155056250_155056385_155056471_155056952_155057102_155057187_155057363_155057636_155057730_155057850_155058156_155058245_155058442_155058709_155058788_155059901_155059975_155060204_155060344_155060762_155060833_155061414_155061490_155062244_155062370_155062459
transcript_147212.known	chr3	+	2379	7	FSM	ENSG00000113845.10	ENST00000494664.6	2379	7	0	0	0	0	multi-exon	FALSE	canonical	3	479	junction_1	49.0773199485601	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATGTCAGAGGAAATTAG	119489221	True	NA	NA	False	NA	NA	NA	119498546	119525090	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_119498928_119500694_119500861_119503531_119503621_119503953_119504022_119513640_119513720_119517204_119517316_119523605
transcript_147221.known	chr3	+	670	4	FSM	ENSG00000113845.10	ENST00000463927.6	670	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	275.173884419773	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGAAAATTGAAAGTAGTT	119489257	True	NA	NA	False	NA	NA	NA	119498582	119523638	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_119498943_119500694_119500861_119517204_119517316_119523605
transcript_147223.nic	chr3	+	1029	4	NIC	ENSG00000113845.10	novel	725	6	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	280.185652737609	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGTTGAATTTTACAGT	119489219	True	NA	9	True	AATAAA	-16	NA	119498544	119524061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_119498928_119513640_119513720_119517204_119517316_119523605
transcript_147225.known	chr3	+	710	3	FSM	ENSG00000113845.10	ENST00000493694.1	710	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	294	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCCACTCTTTGGTCAG	119489221	True	NA	-55	True	NA	NA	NA	119498546	119523823	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_119498928_119517204_119517316_119523605
transcript_147226.known	chr3	+	3439	5	FSM	ENSG00000144843.12	ENST00000357003.8	3623	5	184	0	86	0	multi-exon	FALSE	canonical	1	1	junction_1	6.57171971404746	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTGCCATTCTTATCA	119579663	False	NA	9	True	AATAAA	-20	NA	119579675	119589945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_119579852_119580550_119580637_119582133_119582468_119586284_119586646_119587463
transcript_147228.known	chr3	+	1501	4	FSM	ENSG00000144843.12	ENST00000478927.5	1501	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	2.35702260395516	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCACCTTAAGCTCAGTTT	119579577	True	NA	NA	False	NA	NA	NA	119579589	119588007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_119579852_119582133_119582468_119586284_119586646_119587463
transcript_14723.nic	chr1	+	2953	22	NIC	ENSG00000143537.14	novel	2946	23	NA	NA	-62	0	combination_of_known_junctions	TRUE	canonical	3	9	junction_20	28.325689244956	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGAGTTTGTCTGCTTC	155051174	False	NA	27	True	AATAAA	-21	NA	155051223	155062775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_155051466_155052670_155052778_155053416_155053494_155053909_155053989_155054149_155054227_155054313_155054507_155055789_155055853_155055931_155056001_155056079_155056250_155056385_155056471_155056952_155057102_155057187_155057363_155057636_155057730_155057850_155058156_155058245_155058442_155058709_155058788_155059901_155059975_155060204_155060344_155060762_155060833_155061417_155061490_155062244_155062370_155062459
transcript_147234.known	chr3	-	471	4	FSM	ENSG00000138495.7	ENST00000484810.5	471	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	1279.15623231358	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTCAGTTGTGTTTCTT	-119662236	True	NA	-17	True	AGTAAA	-16	NA	119677346	119669531	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_119669666_119675144_119675234_119676861_119676967_119677203
transcript_147236.known	chr3	-	426	3	FSM	ENSG00000138495.7	ENST00000261070.7	426	3	0	0	0	0	multi-exon	FALSE	canonical	3	2764	junction_1	276.5	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTCAGTTGTGTTTCTT	-119662296	True	NA	-17	True	AGTAAA	-16	NA	119677406	119669531	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_119669666_119675144_119675234_119677203
transcript_147237.known	chr3	-	660	3	FSM	ENSG00000138495.7	ENST00000497116.1	660	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	1625.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTAATGTCAAAAATGCAA	-119662254	True	NA	NA	False	AATAAA	-42	NA	119677364	119674378	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_119674789_119675144_119675234_119677203
transcript_147238.known	chr3	+	939	6	FSM	ENSG00000183833.16	ENST00000463700.1	939	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	2.92574776766556	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTTATCGTACTCTAT	119702858	True	NA	NA	False	AATAAA	-22	NA	119703032	119715934	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_119703223_119706808_119706886_119707403_119707562_119708590_119708675_119709838_119709896_119715561
transcript_14724.known	chr1	+	2874	22	FSM	ENSG00000143537.14	ENST00000359280.8	2874	22	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_19	22.5947237635275	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATCTTGGGAGCGTTCCC	155049048	True	NA	10	True	AATAAA	-4	NA	155051285	155062758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155051466_155052670_155052778_155053416_155053494_155053909_155053989_155054149_155054227_155054313_155054507_155055789_155055853_155055931_155056001_155056079_155056250_155056385_155056471_155056952_155057102_155057187_155057363_155057636_155057730_155057850_155058156_155058245_155058442_155058709_155058788_155059901_155059975_155060204_155060344_155060762_155060833_155061903_155061976_155062244_155062370_155062459
transcript_147250.known	chr3	-	7743	11	FSM	ENSG00000082701.17	ENST00000264235.13	7743	11	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	10.8300507847378	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTGTGGTCCTCTTATT	-120092584	True	NA	NA	False	AATAAA	-18	NA	120094447	119821320	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_119826856_119843254_119843354_119863418_119863606_119876412_119876509_119905754_119905853_119912703_119912811_119916043_119916175_119923372_119923484_119947267_119947352_120002045_120002240_120093346
transcript_147253.known	chr3	-	1731	10	FSM	ENSG00000082701.17	ENST00000650344.2	1731	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	38.8272527428294	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAGTGTTCAATTTTTT	-120093796	False	1863	-12	True	ATTAAA	-21	NA	120093891	119826677	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_119826856_119863418_119863606_119876412_119876509_119905754_119905853_119912703_119912811_119916043_119916175_119923372_119923484_119947267_119947352_120002045_120002240_120093346
transcript_147256.known	chr3	-	1561	7	FSM	ENSG00000082701.17	ENST00000678245.1	1561	7	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_2	8.25462833135986	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTAAAATGTATGTAAGCT	-120093796	False	1863	NA	False	TTTAAA	-31	NA	120093891	119905463	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_119905853_119912703_119912811_119916043_119916175_119923372_119923484_119947267_119947352_120002045_120002240_120093346
transcript_147257.known	chr3	-	1826	2	FSM	ENSG00000082701.17	ENST00000677530.1	1826	2	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAGACTCTGTCTCAAAA	-120093796	False	1863	NA	False	NA	NA	NA	120093891	120000958	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_120002240_120093346
transcript_147259.known	chr3	-	7918	4	FSM	ENSG00000163428.4	ENST00000295628.4	7918	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	7.78888096369861	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTTCTAGATGCAATGG	-120347922	True	NA	-42	True	ATTAAA	-17	NA	120349354	120324508	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_120331409_120334861_120335140_120335824_120335954_120348743
transcript_147266.nnic	chr3	-	2503	13	NNC	ENSG00000163430.12	novel	5682	11	NA	NA	-367	1941	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	451.845866972356	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGTTTTATTGGTTTCC	NA	False	NA	-15	True	AATAAA	-11	NA	120451360	120394281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_120395308_120395836_120395931_120397192_120397230_120399882_120399960_120402807_120402919_120403241_120403355_120404852_120404972_120409531_120409663_120410951_120410985_120411853_120411984_120415922_120416028_120450683_120450747_120450896
transcript_147267.nnic	chr3	-	3010	12	NNC	ENSG00000163430.12	novel	5682	11	NA	NA	-342	1944	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	403.404909069234	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTATTGGTTTCCTTT	-120451184	True	NA	-12	True	AATAAA	-14	NA	120451335	120394278	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_120395931_120397192_120397230_120399882_120399960_120402807_120402919_120403241_120403355_120404852_120404972_120409531_120409663_120410951_120410985_120411853_120411984_120415922_120416028_120450683_120450747_120450896
transcript_147271.known	chr3	-	5682	11	FSM	ENSG00000163430.12	ENST00000295633.8	5682	11	0	0	0	0	multi-exon	FALSE	canonical	3	996	junction_5	73.5568487633884	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTCTTGTCATTTTCTT	-120434936	True	NA	NA	False	ATTAAA	-18	NA	120450992	120392292	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_120396997_120399882_120399960_120402807_120402919_120403241_120403355_120404852_120404972_120409531_120409663_120410951_120410985_120411853_120411984_120415922_120416028_120450683_120450747_120450896
transcript_147277.known	chr3	-	677	3	FSM	ENSG00000163430.12	ENST00000485968.5	677	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	502	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGGGATGAATCCCTGA	-120434904	True	NA	NA	False	NA	NA	NA	120450960	120423526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_120424077_120450683_120450747_120450896
transcript_147284.known	chr3	+	651	3	FSM	ENSG00000065518.8	ENST00000184266.3	651	3	0	0	0	0	multi-exon	FALSE	canonical	3	4286	junction_1	174.5	1178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATTCTACAATCAGTTGT	120567637	True	NA	NA	False	ATTAAA	-21	NA	120596335	120602507	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_120596540_120601110_120601258_120602207
transcript_147285.known	chr3	+	558	3	FSM	ENSG00000065518.8	ENST00000491335.1	558	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	2301	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTAGTTTCTCTTTCTTA	120567658	True	NA	27	True	AATAAA	-19	NA	120596356	120602328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_120596647_120601110_120601258_120602207
transcript_147287.known	chr3	+	309	2	FSM	ENSG00000065518.8	ENST00000492739.1	309	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAAGTAGTAGTTTCTCTT	120567648	True	NA	22	True	AATAAA	-14	NA	120596346	120602323	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_120596540_120602207
transcript_147288.known	chr3	-	1007	9	FSM	ENSG00000144840.10	ENST00000491398.5	1007	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	67.8449519124304	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAATGGAAAAATGAAAGG	-120739395	True	NA	NA	False	NA	NA	NA	120742533	120689693	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_120689889_120690448_120690488_120694152_120694225_120698422_120698574_120705999_120706115_120709779_120709910_120730695_120730788_120738526_120738668_120742461
transcript_147290.known	chr3	-	3960	9	FSM	ENSG00000144840.10	ENST00000648525.1	3960	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	68.2843320242645	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGCTTTTCTCAATAA	-120739378	True	NA	NA	False	AATAAA	-2	NA	120742516	120686700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_120689889_120690448_120690488_120694152_120694225_120698422_120698574_120705999_120706115_120709779_120709910_120730695_120730788_120738549_120738668_120742461
transcript_147292.known	chr3	-	2370	8	FSM	ENSG00000144840.10	ENST00000473654.5	2370	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	56.32920727151	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACAGTTTTCATTTCTCA	NA	False	NA	NA	False	AATAAA	-1	NA	120742993	120688596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_120689889_120690448_120690488_120694152_120694225_120698422_120698521_120705999_120706115_120709779_120709910_120730695_120730788_120742461
transcript_147293.known	chr3	-	5605	8	FSM	ENSG00000144840.10	ENST00000273375.8	5605	8	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_2	10.6291858501362	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATCTGTAGCTGTGTAAG	-120739378	True	NA	NA	False	ATTAAA	-30	NA	120742516	120684937	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_120689889_120690448_120690488_120694152_120694225_120698422_120698574_120705999_120706115_120709779_120709910_120730695_120730788_120742461
transcript_147297.known	chr3	-	760	7	FSM	ENSG00000144840.10	ENST00000483733.1	760	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	56.4170974872768	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTACCCTTCAGCCTTACC	-120739382	True	NA	NA	False	NA	NA	NA	120742520	120689714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_120689889_120690448_120690488_120698422_120698574_120705999_120706115_120709779_120709910_120730695_120730788_120742461
transcript_147302.known	chr3	+	3000	5	FSM	ENSG00000153767.10	ENST00000283875.6	3000	5	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	31.3169283295792	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAGTTTGTTCATTTTAA	120733986	True	NA	16	True	AATAAA	-16	NA	120742743	120783069	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_120742795_120750522_120751001_120770727_120770930_120776422_120776665_120781042
transcript_147304.nnic	chr3	+	3150	5	NNC	ENSG00000153767.10	novel	3000	5	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	121.740246015851	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAGTTTGTTCATTTTAA	120734013	True	NA	16	True	AATAAA	-16	NA	120742770	120783069	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_120742972_120750522_120751001_120770727_120770930_120776422_120776665_120781042
transcript_147306.known	chr3	+	567	2	FSM	ENSG00000153767.10	ENST00000497393.1	567	2	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTGATTCATCTAATTT	120734004	True	NA	NA	False	AATAAA	-21	NA	120742761	120751056	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_120742795_120750522
transcript_147307.known	chr3	+	9291	27	FSM	ENSG00000145087.13	ENST00000471454.6	9291	27	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_23	7.00010566276973	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTCTCTTATGTCATGA	120907176	True	NA	NA	False	AATAAA	-21	NA	120908204	121424761	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_120908335_120909570_120909768_120954939_120955038_121041699_121041782_121045434_121045536_121114924_121115060_121121640_121121705_121152476_121152561_121157503_121157628_121205922_121206002_121223002_121223158_121233615_121233689_121238970_121239119_121240439_121240508_121250722_121250764_121254894_121255113_121257160_121257334_121259042_121259169_121279804_121279957_121318474_121318541_121378715_121378887_121381292_121381533_121407242_121407604_121413157_121413324_121415856_121415969_121418336_121418558_121419055
transcript_147308.known	chr3	+	9496	28	FSM	ENSG00000145087.13	ENST00000273666.10	9496	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	7.67873446363155	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTCTCTTATGTCATGA	NA	False	NA	NA	False	AATAAA	-21	NA	120908071	121424761	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_120908335_120909570_120909768_120954939_120955038_121041699_121041782_121045434_121045536_121114924_121115060_121121640_121121705_121152476_121152561_121157503_121157628_121205922_121206002_121223002_121223158_121233615_121233689_121238970_121239119_121240439_121240508_121250722_121250764_121254894_121255113_121257160_121257334_121259042_121259169_121279804_121279957_121282265_121282338_121318474_121318541_121378715_121378887_121381292_121381533_121407242_121407604_121413157_121413324_121415856_121415969_121418336_121418558_121419055
transcript_147313.nnic	chr3	+	883	3	NNC	ENSG00000145087.13	novel	2321	9	NA	NA	-30	-128600	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	13	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCTGGATTGGTTAATGT	120907146	True	NA	NA	False	AATAAA	-23	NA	120908174	120916846	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_120908335_120909570_120909768_120916320
transcript_147315.known	chr3	+	2321	9	FSM	ENSG00000145087.13	ENST00000461772.5	2321	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	9.71387538524146	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCAGCCTTGATGTCTTTT	120907207	True	NA	NA	False	AATAAA	-25	NA	120908235	121158968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_120908335_120909570_120909768_120954943_120955038_121041699_121041782_121045434_121045536_121114924_121115060_121121640_121121705_121152476_121152561_121157503
transcript_14732.known	chr1	+	2799	21	FSM	ENSG00000143537.14	ENST00000271836.10	2799	21	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_19	23.1708329587005	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGAGTTTGTCTGCTTC	155049068	True	NA	27	True	AATAAA	-21	NA	155051305	155062775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155051466_155052670_155052778_155053416_155053494_155053909_155053989_155054149_155054227_155054313_155054507_155055789_155055853_155055931_155056001_155056079_155056250_155056385_155056471_155056952_155057102_155057187_155057363_155057636_155057730_155057850_155058156_155058245_155058442_155058709_155058788_155059901_155059975_155060204_155060344_155060762_155060833_155062244_155062370_155062459
transcript_147322.nic	chr3	-	3765	16	ISM	ENSG00000051341.15	ENST00000264233.6	8757	30	-19	57865	-19	32275	5prime_fragment	FALSE	canonical	3	40	junction_10	8.98789309138811	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAATAGAGAGACAAATGC	-121542261	True	NA	NA	False	NA	NA	NA	121546007	121489295	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_121490409_121493477_121493722_121496807_121496933_121498476_121498671_121509560_121509704_121510038_121510244_121511886_121512030_121519870_121520084_121522002_121522150_121529644_121529793_121532989_121533210_121537099_121537209_121539432_121539590_121541348_121541480_121544726_121544907_121545714
transcript_147324.nic	chr3	-	3100	16	ISM	ENSG00000051341.15	ENST00000264233.6	8757	30	-19	58530	-19	31610	5prime_fragment	FALSE	canonical	3	40	junction_10	8.98789309138811	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGGCCTCTTTAGATATAAA	-121542261	True	NA	NA	False	AAGAAA	-2	NA	121546007	121489960	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_121490409_121493477_121493722_121496807_121496933_121498476_121498671_121509560_121509704_121510038_121510244_121511886_121512030_121519870_121520084_121522002_121522150_121529644_121529793_121532989_121533210_121537099_121537209_121539432_121539590_121541348_121541480_121544726_121544907_121545714
transcript_147328.known	chr3	-	8757	30	FSM	ENSG00000051341.15	ENST00000264233.6	8757	30	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_24	21.6780024616044	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATATCAACAATTGTTT	-121542242	True	NA	-12	True	AATAAA	-17	NA	121545988	121431430	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_121432418_121432917_121433034_121436121_121436276_121439991_121440117_121449314_121449427_121460049_121460235_121467518_121467641_121468304_121468432_121471989_121472165_121473349_121473488_121476539_121476734_121481571_121481813_121483385_121483583_121485040_121485185_121487301_121490409_121493477_121493722_121496807_121496933_121498476_121498671_121509560_121509704_121510038_121510244_121511886_121512030_121519870_121520084_121522002_121522150_121529644_121529793_121532989_121533210_121537099_121537209_121539432_121539590_121541348_121541480_121544726_121544907_121545714
transcript_147343.nic	chr3	-	1065	3	ISM	ENSG00000051341.15	ENST00000264233.6	8757	30	-19	109457	-19	-3788	5prime_fragment	FALSE	canonical	3	43	junction_1	10	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTACAGAAGGAAATTAAAA	-121542261	True	NA	NA	False	ATTAAA	-5	NA	121546007	121540887	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_121541480_121544726_121544907_121545714
transcript_147344.known	chr3	-	1992	14	FSM	ENSG00000180353.11	ENST00000314583.8	1992	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	3.42804307002418	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGAGGTAAATAGTACTT	-121660835	True	NA	0	True	AATAAA	-23	NA	121660903	121631398	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_121631983_121632100_121632185_121632331_121632564_121633066_121633172_121634206_121634419_121635734_121635805_121636433_121636490_121637145_121637257_121642926_121642982_121644817_121644929_121647318_121647449_121657278_121657353_121658263_121658348_121660819
transcript_147347.known	chr3	-	11187	22	FSM	ENSG00000173230.16	ENST00000340645.9	11187	22	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_16	51.848943337064	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGTGTATGTGTGTGT	-121742917	True	NA	NA	False	AATAAA	-20	NA	121749755	121663198	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_121664615_121664925_121665032_121667475_121667611_121668060_121668159_121669211_121669356_121676892_121677031_121677284_121677451_121681686_121681866_121690669_121692582_121693740_121698930_121699811_121699886_121702480_121702596_121714860_121714977_121716736_121717140_121718387_121718502_121719645_121719754_121722261_121722379_121726912_121727042_121729187_121729341_121729864_121730018_121730875_121730974_121749631
transcript_147349.known	chr3	-	11198	22	FSM	ENSG00000173230.16	ENST00000393667.7	11198	22	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_16	51.4841410537784	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTTGTGTGTATGTGT	-121742902	True	NA	NA	False	AATAAA	-16	NA	121749740	121663202	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_121664615_121664925_121665032_121667475_121667611_121668060_121668159_121669196_121669356_121676892_121677031_121677284_121677451_121681686_121681866_121690669_121692582_121693740_121698930_121699811_121699886_121702480_121702596_121714860_121714977_121716736_121717140_121718387_121718502_121719645_121719769_121722261_121722379_121726912_121727042_121729187_121729341_121729864_121730018_121730875_121730974_121749631
transcript_147363.known	chr3	-	11115	21	NIC	ENSG00000173230.16	novel	10295	22	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	56.4990929130725	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTTGTGTGTATGTGT	-121749742	False	NA	NA	False	AATAAA	-16	NA	121749767	121663202	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_121664615_121664925_121665032_121667475_121667611_121668060_121668159_121669211_121669356_121676892_121677031_121677284_121677451_121681686_121681866_121690669_121692582_121693740_121698930_121699811_121699886_121702480_121702596_121714860_121714977_121716736_121717140_121718387_121718502_121722261_121722379_121726912_121727042_121729187_121729341_121729864_121730018_121730847_121730974_121749631
transcript_147364.known	chr3	-	4959	12	FSM	ENSG00000173230.16	ENST00000494517.5	4959	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	19.392424183234	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGAGAAAGTTTGCTAAAT	-121742828	True	NA	NA	False	AAGAAA	-20	NA	121749666	121695477	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_121698930_121699811_121699886_121702480_121702596_121714860_121714977_121716736_121717140_121718387_121718502_121722261_121722379_121726912_121727042_121729187_121729341_121729864_121730018_121730875_121730974_121749631
transcript_147378.known	chr3	-	280	3	FSM	ENSG00000173230.16	ENST00000472475.1	280	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	25.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAATAATACTACACAAGAA	-121749138	False	NA	NA	False	NA	NA	NA	121749163	121729989	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_121730018_121730875_121730974_121749009
transcript_14738.known	chr1	+	2678	21	FSM	ENSG00000143537.14	ENST00000531455.5	2678	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	33.4476830288736	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCAGCGGGGGCTTGGGG	155049113	True	NA	-79	True	NA	NA	NA	155051350	155062669	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155051466_155052640_155052778_155053416_155053494_155053909_155053989_155054149_155054227_155054313_155054507_155055789_155055853_155055931_155056001_155056079_155056250_155056385_155056471_155056952_155057102_155057187_155057363_155057636_155057730_155057850_155058156_155058245_155058442_155058709_155058788_155059901_155059975_155060204_155060344_155060762_155060833_155062244_155062370_155062459
transcript_147381.known	chr3	-	2577	15	FSM	ENSG00000173226.17	ENST00000310864.11	2577	15	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_13	19.2130907753765	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACTGTTTCCCTTTTTGT	-121831210	True	NA	0	True	ATTAAA	-18	NA	121835060	121769760	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_121770575_121772556_121772714_121781742_121781875_121788283_121788433_121790072_121790216_121795456_121795567_121797117_121797228_121799195_121799375_121807343_121807444_121808915_121809010_121826050_121826181_121828469_121828633_121828860_121828973_121834390_121834480_121834965
transcript_147394.known	chr3	+	998	6	FSM	ENSG00000145088.9	ENST00000273668.7	998	6	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_3	7.90948797331408	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATGTTATGTATTTGTT	121834193	True	NA	9	True	ATTAAA	-19	NA	121835208	121886526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_121835392_121844452_121844548_121854686_121854824_121857010_121857157_121872536_121872789_121886341
transcript_147396.known	chr3	+	5447	22	FSM	ENSG00000163406.11	ENST00000489711.6	5447	22	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3.20147358361364	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATATGACTGTCACCATT	121894258	True	NA	7	True	ATTAAA	-20	NA	121894400	121944188	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_121894582_121896405_121896494_121897387_121897530_121911573_121911667_121913020_121913121_121915226_121915318_121915615_121915694_121922219_121922303_121922774_121922862_121923039_121923130_121923221_121923267_121924350_121924384_121924944_121925034_121927757_121927840_121928420_121928556_121928981_121929147_121929301_121929349_121930839_121930951_121931638_121931736_121939348_121939496_121940383_121940489_121940830
transcript_147399.known	chr3	+	2379	21	FSM	ENSG00000163406.11	ENST00000295605.6	2379	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTCCAAATGACCATGAA	121894297	True	NA	NA	False	ATTAAA	-31	NA	121894439	121941252	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_121894582_121896405_121896494_121897387_121897530_121913020_121913121_121915226_121915318_121915615_121915694_121922219_121922303_121922774_121922862_121923039_121923130_121923221_121923267_121924350_121924384_121924944_121925034_121927757_121927840_121928420_121928556_121928981_121929147_121929301_121929349_121930839_121930951_121931638_121931736_121939348_121939496_121940383_121940489_121940830
transcript_147402.known	chr3	-	2855	8	FSM	ENSG00000145103.15	ENST00000344209.10	2855	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	5.02646059593119	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTGCATTTGATTGGA	-122021853	True	NA	0	True	AATAAA	-15	NA	122022247	121987322	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_121988409_121993149_121993971_121994181_121994314_122001307_122001455_122001744_122001865_122005243_122005394_122006990_122007162_122022019
transcript_147404.nnic	chr3	-	2856	8	NNC	ENSG00000145103.15	novel	2855	8	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.72949492425839	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTGCATTTGATTGGA	-122021895	True	NA	0	True	AATAAA	-15	NA	122022289	121987322	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_121988409_121993190_121993971_121994181_121994314_122001307_122001455_122001744_122001865_122005243_122005394_122006990_122007162_122022019
transcript_147408.known	chr3	-	2659	7	FSM	ENSG00000145103.15	ENST00000273691.7	2659	7	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_2	7.49258893099634	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTGCATTTGATTGGA	-122021789	True	NA	0	True	AATAAA	-15	NA	122022183	121987322	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_121988409_121993149_121993971_122001307_122001455_122001744_122001865_122005243_122005394_122006990_122007162_122022019
transcript_147412.nic	chr3	-	2920	7	ISM	ENSG00000145103.15	ENST00000344209.10	2855	8	-42	4718	-42	-3635	5prime_fragment	FALSE	canonical	3	17	junction_1	4.07226390762354	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTACAGGCTACCCATGAAG	-122021895	True	NA	NA	False	AATAAA	-16	NA	122022289	121992040	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_121993971_121994181_121994314_122001307_122001455_122001744_122001865_122005243_122005394_122006990_122007162_122022019
transcript_147414.nic	chr3	-	2788	6	ISM	ENSG00000145103.15	ENST00000273691.7	2659	7	-106	4718	-42	-3635	5prime_fragment	FALSE	canonical	3	7	junction_1	7.41889479639656	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTACAGGCTACCCATGAAG	-122021895	True	NA	NA	False	AATAAA	-16	NA	122022289	121992040	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_121993971_122001307_122001455_122001744_122001865_122005243_122005394_122006990_122007162_122022019
transcript_147420.known	chr3	-	545	5	FSM	ENSG00000160124.9	ENST00000479899.5	545	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	250.460575739975	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGGCGGGCTTTCTAGGA	-122373302	True	NA	62	True	NA	NA	NA	122383227	122359787	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_122359920_122362967_122363028_122368175_122368323_122371674_122371801_122383147
transcript_147421.known	chr3	-	720	5	FSM	ENSG00000160124.9	ENST00000291458.9	720	5	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_1	49.4797938556741	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTATTTGATTGTTTT	-122373306	True	NA	NA	False	ATTAAA	-22	NA	122383231	122359590	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_122359920_122362967_122363028_122368175_122368323_122371674_122371801_122383173
transcript_147423.known	chr3	-	683	3	FSM	ENSG00000160124.9	ENST00000498466.1	683	3	0	0	0	0	multi-exon	FALSE	canonical	3	518	junction_2	56.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGAGACATAACCTGAGA	-122373306	True	NA	NA	False	NA	NA	NA	122383231	122367823	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_122368323_122371674_122371801_122383173
transcript_147424.known	chr3	+	801	6	FSM	ENSG00000114023.16	ENST00000232125.9	801	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	1241.89654963689	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTCATAAAGTATGATTT	122364595	True	NA	-23	True	ATTAAA	-21	NA	122384175	122409917	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_122384300_122401375_122401536_122402759_122402883_122404257_122404364_122407280_122407390_122409738
transcript_147425.known	chr3	+	3052	5	FSM	ENSG00000114023.16	ENST00000477892.5	3052	5	0	0	0	0	multi-exon	FALSE	canonical	3	2440	junction_1	53.3853912601566	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTTACTTTTTATTTTTAA	122364601	True	NA	25	True	AATAAA	-18	NA	122384181	122412334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_122384300_122402759_122402883_122404257_122404364_122407280_122407390_122409738
transcript_147431.known	chr3	-	1923	15	FSM	ENSG00000114030.13	ENST00000494339.5	1923	15	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_10	109.267972416067	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAATACTCTGCTTTCACG	-122508623	True	NA	NA	False	NA	NA	NA	122514934	122426984	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_122427173_122427537_122427717_122433660_122433789_122437169_122437296_122442037_122442117_122449573_122449738_122451533_122451634_122451975_122452065_122453869_122454002_122457725_122457849_122461223_122461319_122463941_122464042_122467321_122467430_122496436_122496571_122514756
transcript_147439.known	chr3	-	6888	14	FSM	ENSG00000114030.13	ENST00000344337.11	6888	14	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_4	17.4172600240555	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAAGGAATTCCCTTATG	-122508628	True	NA	44	True	AGTAAA	-21	NA	122514939	122421901	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_122427173_122427537_122427717_122433660_122433789_122437169_122437296_122442037_122442117_122449573_122449738_122451533_122451634_122451975_122452065_122453869_122454002_122461223_122461319_122463941_122464042_122467321_122467430_122496436_122496571_122514756
transcript_147449.nic	chr3	-	3006	14	NIC	ENSG00000114030.13	novel	6888	14	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_13	70.8188789057512	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATGACTGCAATCTGTA	-122508642	True	NA	-25	True	AATAAA	-27	NA	122514953	122425679	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_122427173_122427537_122427717_122433660_122433789_122437169_122437296_122442037_122442117_122449573_122449738_122451533_122451634_122451975_122452065_122453869_122454002_122461223_122461319_122463941_122464042_122467321_122467430_122496436_122496571_122514874
transcript_147464.known	chr3	+	1271	2	FSM	ENSG00000287207.1	ENST00000659697.1	1271	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTTGAGATATTTTTAT	122514969	True	NA	NA	False	AATAAA	-31	NA	122515005	122518172	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_122515129_122517024
transcript_147466.known	chr3	-	3045	11	FSM	ENSG00000138496.17	ENST00000682323.1	3045	11	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_10	5.30659966456864	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCTCTGAAAAATTATGT	-122564274	False	NA	NA	False	AATAAA	-19	NA	122564300	122527923	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_122528744_122536167_122536343_122536933_122537074_122540471_122540853_122545431_122545490_122550583_122550803_122552417_122552640_122555285_122556122_122558433_122558468_122559605_122559710_122564244
transcript_147467.known	chr3	-	3128	11	FSM	ENSG00000138496.17	ENST00000477522.6	3128	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_10	5.15848815061157	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCTCTGAAAAATTATGT	-122564551	False	NA	NA	False	AATAAA	-19	NA	122564577	122527923	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_122528744_122536167_122536343_122536933_122537074_122540471_122540853_122545431_122545490_122550583_122550803_122552417_122552640_122555285_122556122_122558433_122558468_122559605_122559710_122564438
transcript_147468.known	chr3	+	5768	5	FSM	ENSG00000163840.10	ENST00000296161.9	5768	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	3.64005494464026	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTTCTTTCCCTTGCTT	122564298	True	NA	NA	False	AATAAA	-20	NA	122564337	122575203	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_122564614_122565858_122566071_122568488_122570025_122570454_122570673_122571677
transcript_147473.known	chr3	-	1964	8	FSM	ENSG00000169087.11	ENST00000306103.3	1964	8	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	6.13787173112595	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGCCATTCATTTACAT	-122792637	True	NA	-18	True	AATAAA	-17	NA	122793831	122739998	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_122740876_122741002_122741114_122752590_122752675_122755259_122755432_122759223_122759361_122768700_122768883_122777720_122777907_122793616
transcript_147478.known	chr3	+	3322	9	FSM	ENSG00000138463.9	ENST00000261038.6	3322	9	0	0	0	0	multi-exon	TRUE	canonical	3	101	junction_6	17.8426280295252	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGAATTCTCTTTTTTTT	122794064	True	NA	NA	False	AATAAA	-17	NA	122795068	122881139	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_122795536_122806856_122806951_122826799_122827066_122833316_122833447_122845762_122845872_122856306_122856375_122860074_122860203_122872414_122872598_122879262
transcript_147483.known	chr3	-	4855	23	FSM	ENSG00000082684.16	ENST00000357599.8	4855	23	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_22	13.693516593418	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATCTTTAATAGATGATA	-123026651	True	NA	NA	False	NA	NA	NA	123027763	122909081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_122910302_122910839_122911046_122911490_122911536_122911919_122912070_122912171_122912343_122912842_122913062_122913198_122913425_122913533_122913682_122913857_122914002_122915439_122915622_122915772_122915891_122921914_122922123_122922239_122922448_122923616_122923753_122926391_122926678_122927789_122928004_122928516_122928616_122928995_122929059_122939424_122939471_122943435_122943536_122948505_122948710_122961139_122961302_123027463
transcript_147487.known	chr3	-	4805	22	FSM	ENSG00000082684.16	ENST00000648990.1	4805	22	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	16.8083771361221	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATCTTTAATAGATGATA	-123027868	False	NA	NA	False	NA	NA	NA	123027878	122909081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_122910302_122910839_122911046_122911490_122911536_122911919_122912070_122912171_122912343_122912842_122913062_122913198_122913425_122913536_122913682_122913857_122914002_122915439_122915622_122915772_122915891_122921914_122922123_122922239_122922448_122923616_122923753_122926391_122926678_122927789_122928004_122928516_122928616_122928995_122929059_122939424_122939471_122943435_122943536_122948505_122948710_123027463
transcript_147495.nic	chr3	-	3706	9	ISM	ENSG00000082684.16	ENST00000357599.8	4855	23	6	15072	6	189	5prime_fragment	FALSE	canonical	3	23	junction_8	13.4884209602162	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAGAGTGTTAACATATT	-123026645	True	NA	-19	True	AATAAA	-26	NA	123027757	122924153	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_122926678_122927789_122928004_122928516_122928616_122928995_122929059_122939424_122939471_122943435_122943536_122948505_122948710_122961139_122961302_123027463
transcript_147496.known	chr3	-	3309	8	FSM	ENSG00000082684.16	ENST00000649167.1	3309	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	11.6584032932018	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGAGGCGTTTGGTATG	-123026599	True	NA	NA	False	ACTAAA	-13	NA	123027711	122924342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_122926678_122927789_122928004_122928516_122928616_122928995_122929059_122939424_122939471_122943435_122943536_122948505_122948710_123027463
transcript_1475.known	chr1	+	3028	7	FSM	ENSG00000157916.20	ENST00000605895.6	3028	7	0	0	0	0	multi-exon	FALSE	canonical	3	772	junction_1	115.149178604684	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGAATTACTTCTCAAC	2381573	True	NA	24	True	AATAAA	-16	NA	2391840	2405436	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_2391959_2395783_2395872_2397115_2397221_2399414_2399515_2400856_2400936_2402206_2402343_2403034
transcript_147511.known	chr3	+	1844	17	FSM	ENSG00000065485.20	ENST00000316218.12	1844	17	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_12	31.3687120193036	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGGTATGGTTTATTT	123063810	True	NA	13	True	AATAAA	-14	NA	123067024	123162104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_123067207_123089167_123089295_123092354_123092443_123102410_123102495_123102750_123102797_123106748_123106842_123110943_123111005_123116230_123116299_123124065_123124158_123124271_123124344_123130479_123130617_123145521_123145593_123146098_123146260_123150233_123150365_123154970_123155042_123161320_123161456_123161879
transcript_147514.nic	chr3	+	2291	16	ISM	ENSG00000065485.20	ENST00000316218.12	1844	17	-24	1	-24	0	intron_retention	FALSE	canonical	3	194	junction_12	32.3169030419411	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGTGGTATGGTTTATT	123063786	True	NA	12	True	AATAAA	-13	NA	123067000	123162103	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_123067207_123089167_123089295_123092354_123092443_123102410_123102495_123102750_123102797_123106748_123106842_123110943_123111005_123116230_123116299_123124065_123124158_123124271_123124344_123130479_123130617_123145521_123145593_123146098_123146260_123150233_123150365_123154970_123155042_123161320
transcript_147517.known	chr3	+	1651	16	FSM	ENSG00000065485.20	ENST00000489923.5	1651	16	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_11	93.970917486919	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGGTATGGTTTATTT	123063847	True	NA	13	True	AATAAA	-14	NA	123067061	123162104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_123067207_123089167_123089295_123092354_123092443_123102410_123102495_123102750_123102797_123106748_123106842_123110943_123111005_123116230_123116299_123124065_123124158_123124271_123124344_123145521_123145593_123146117_123146260_123150233_123150365_123154970_123155042_123161320_123161456_123161879
transcript_147527.known	chr3	+	3401	7	FSM	ENSG00000121542.12	ENST00000492595.6	3401	7	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	13.6381816969859	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTTTCATTATTTGG	123200770	True	NA	18	True	TATAAA	-18	NA	123201942	123274136	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_123201987_123209198_123209400_123223558_123223723_123225102_123225298_123245898_123246015_123259523_123259590_123271521
transcript_147540.nic	chr3	-	2573	12	ISM	ENSG00000173175.15	ENST00000309879.9	2841	21	96290	-634	-1900	0	3prime_fragment	FALSE	canonical	3	26	junction_10	36.6195540051649	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTCCGTGCCCTTCTT	-123319823	True	NA	-28	True	AATAAA	-8	NA	123320052	123283943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_123284737_123286684_123286810_123289749_123289955_123291112_123291377_123296083_123296217_123297352_123297383_123300119_123300296_123303054_123303220_123304066_123304184_123314234_123314323_123318019_123318118_123319673
transcript_147548.nnic	chr3	-	2536	11	NNC	ENSG00000173175.15	novel	3962	23	NA	NA	3173	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_10	30.763614872118	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTCCGTGCCCTTCTT	-123314750	False	NA	-28	True	AATAAA	-8	NA	123314979	123283943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_123284737_123286684_123286810_123289749_123289955_123291112_123291377_123296083_123296217_123297352_123297383_123300119_123300296_123303054_123303220_123304066_123304184_123314234_123314323_123314539
transcript_147552.nic	chr3	-	4360	10	ISM	ENSG00000173175.15	ENST00000309879.9	2841	21	101404	-2282	3214	0	3prime_fragment	FALSE	canonical	3	97	junction_8	16.7648957167965	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCCTGGTCTGATTTGC	-123314709	False	NA	0	True	ATTAAA	-16	NA	123314938	123282295	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_123284737_123286684_123286810_123289749_123289955_123291112_123291377_123296083_123296217_123297352_123297383_123300119_123300296_123303054_123303220_123304066_123304184_123314234
transcript_147556.nic	chr3	-	2604	10	ISM	ENSG00000173175.15	ENST00000309879.9	2841	21	101512	-634	3322	0	3prime_fragment	FALSE	canonical	3	97	junction_8	16.7648957167965	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTCCGTGCCCTTCTT	-123314601	False	229	-28	True	AATAAA	-8	NA	123314830	123283943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_123284737_123286684_123286810_123289749_123289955_123291112_123291377_123296083_123296217_123297352_123297383_123300119_123300296_123303054_123303220_123304066_123304184_123314234
transcript_147557.nnic	chr3	-	2419	10	NNC	ENSG00000173175.15	novel	3962	23	NA	NA	3173	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_8	41.1720269414701	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTCCGTGCCCTTCTT	-123314750	False	NA	-28	True	AATAAA	-8	NA	123314979	123283943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_123284737_123286684_123286810_123289749_123289955_123291112_123291377_123296083_123296217_123297352_123297383_123300119_123300296_123303054_123303220_123314234_123314323_123314539
transcript_147560.nnic	chr3	-	3893	9	NIC	ENSG00000173175.15	novel	6643	21	NA	NA	3564	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_8	34.1906419945575	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCCTGGTCTGATTTGC	-123313085	True	NA	0	True	ATTAAA	-16	NA	123314588	123282295	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_123284737_123286684_123286810_123289749_123289955_123291112_123291377_123296083_123296217_123297352_123297383_123300119_123300296_123303054_123303220_123314234
transcript_147563.nnic	chr3	-	2245	9	NIC	ENSG00000173175.15	novel	3962	23	NA	NA	3564	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_8	34.1906419945575	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTCCGTGCCCTTCTT	-123313085	True	NA	-28	True	AATAAA	-8	NA	123314588	123283943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_123284737_123286684_123286810_123289749_123289955_123291112_123291377_123296083_123296217_123297352_123297383_123300119_123300296_123303054_123303220_123314234
transcript_147568.known	chr3	-	4125	7	FSM	ENSG00000206527.10	ENST00000383657.10	4125	7	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_1	15.1520075677559	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTACCAGTGAGTGCAGT	-123582129	True	NA	-8	True	AATAAA	-29	NA	123585053	123491553	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_123494971_123500514_123500694_123502559_123502682_123528385_123528475_123567761_123567781_123582211_123582330_123584872
transcript_14757.nic	chr1	+	2303	16	NIC	ENSG00000143537.14	novel	2146	15	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	40.471993059673	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGGCTCTTCTCTCCCTG	155049034	True	NA	3	True	ATTAAA	-18	NA	155051271	155058683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_155051466_155052530_155052560_155052670_155052778_155053416_155053494_155053909_155053989_155054149_155054227_155054313_155054507_155055789_155055853_155055931_155056001_155056079_155056250_155056385_155056471_155056952_155057102_155057187_155057363_155057636_155057730_155057850_155058156_155058245
transcript_147574.known	chr3	-	10113	34	FSM	ENSG00000065534.20	ENST00000360304.8	10113	34	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_33	6.17394031608906	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTTGTTCTTAATTCT	-123883537	True	NA	NA	False	AATATA	-15	NA	123884332	123610048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_123614350_123618638_123618771_123620206_123620337_123626817_123626942_123629473_123629627_123638070_123638195_123640286_123640505_123647223_123647428_123648970_123649065_123649161_123649195_123657125_123657429_123664104_123664259_123666218_123666347_123667136_123667188_123682223_123682311_123692734_123692852_123700019_123701006_123701437_123701510_123707753_123708004_123708697_123708896_123709755_123709894_123722127_123722281_123725943_123726079_123732895_123733103_123733686_123734223_123735397_123735417_123737377_123737544_123738896_123739063_123739952_123740002_123752330_123752539_123793676_123793845_123831547_123831671_123876558_123876618_123884205
transcript_147582.known	chr3	+	677	4	FSM	ENSG00000239523.7	ENST00000664237.1	677	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.05480466765633	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCAGATTTGTGGCTTA	123585215	True	NA	NA	False	AATAAA	-31	NA	123585538	123630821	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_123585554_123585646_123585795_123629493_123629682_123630495
transcript_147583.known	chr3	-	4131	13	FSM	ENSG00000175455.16	ENST00000409697.8	4131	13	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_9	49.9797181086711	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCATCTGTCTACTCC	-123956561	True	NA	NA	False	AATAAA	-23	NA	123961229	123913421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_123915719_123931101_123931235_123931307_123931527_123933672_123933756_123944848_123944991_123946802_123947320_123948690_123948786_123948895_123949133_123955842_123955966_123956045_123956116_123956354_123956428_123956739_123956796_123961143
transcript_147588.known	chr3	-	3260	12	FSM	ENSG00000175455.16	ENST00000433542.7	3260	12	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_8	63.0285256159647	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGTGTTGTTGGTGAAA	-123956710	True	NA	-3	True	ATTAAA	-17	NA	123961378	123914318	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_123915719_123931101_123931235_123931307_123931527_123933672_123933756_123944848_123944991_123946802_123947320_123948690_123948786_123948895_123949133_123956045_123956116_123956354_123956428_123956739_123956796_123961143
transcript_147609.nic	chr3	-	406	5	ISM	ENSG00000175455.16	ENST00000409697.8	4131	13	-43	42466	0	189	5prime_fragment	FALSE	canonical	3	101	junction_1	33.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACATGAAAAACATACTATT	-123956604	True	NA	57	True	AAAAAG	-5	NA	123961272	123955887	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_123955966_123956045_123956116_123956354_123956428_123956739_123956796_123961143
transcript_147610.known	chr3	-	555	3	FSM	ENSG00000175455.16	ENST00000478956.1	555	3	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	27.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGGGACATTTTGAGAAA	-123956550	True	NA	NA	False	NA	NA	NA	123961218	123956076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_123956116_123956354_123956796_123961143
transcript_147613.nic	chr3	+	3006	15	NIC	ENSG00000160145.16	novel	10888	27	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_3	5.01019369050005	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAAGACTAGTTGACCCT	124584391	True	NA	NA	False	AATAAA	-28	NA	124584631	124675427	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_124584907_124632419_124632704_124633848_124633954_124650807_124650939_124655600_124655668_124657447_124657552_124657733_124657804_124658430_124658518_124659364_124659458_124660922_124660974_124661850_124661929_124666448_124666635_124667011_124667184_124671659_124671899_124674363
transcript_147618.known	chr3	+	6652	6	FSM	ENSG00000114491.14	ENST00000232607.7	6652	6	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_5	20.3921553544494	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTCATGGCATTTGTT	124725869	True	NA	30	True	AATAGA	-18	NA	124730451	124749273	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_124730628_124735092_124735247_124737567_124738240_124740023_124740200_124742151_124742267_124743914
transcript_147620.known	chr3	+	2340	6	FSM	ENSG00000114491.14	ENST00000479719.5	2340	6	0	0	0	0	multi-exon	TRUE	canonical	1	9	junction_3	164.992848329859	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCTTTTCTTGTGTCCTG	124725869	True	NA	NA	False	NA	NA	NA	124730451	124744757	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_124730628_124735092_124735247_124737567_124738444_124740023_124740200_124742151_124742267_124743914
transcript_147623.known	chr3	+	2001	5	FSM	ENSG00000114491.14	ENST00000462091.5	2001	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	174.688830495828	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCTTTTCTTGTGTCCTG	124725850	True	NA	NA	False	NA	NA	NA	124730432	124744757	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_124730628_124737567_124738240_124740023_124740200_124742151_124742267_124743914
transcript_147629.nic	chr3	-	3140	15	NIC	ENSG00000082781.12	novel	4440	15	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_14	459.087987876229	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTGTGTGTTTCTTTCT	-124887656	True	NA	-5	True	ATTAAA	-28	NA	124887734	124762947	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_124763719_124764390_124764558_124766225_124766346_124769012_124769114_124773689_124773913_124796387_124796818_124809021_124809157_124817620_124817711_124819738_124819835_124821312_124821475_124841382_124841552_124848308_124848559_124859241_124859447_124873445_124873532_124887599
transcript_147630.nic	chr3	-	3172	15	NIC	ENSG00000082781.12	novel	4440	15	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	1	29	junction_14	460.551959221603	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTGTGTGTTTCTTTCT	-124901387	True	NA	-5	True	ATTAAA	-28	NA	124901432	124762947	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_124763719_124764390_124764558_124766225_124766346_124769012_124769114_124773689_124773913_124796387_124796818_124809021_124809157_124817620_124817711_124819738_124819835_124821312_124821475_124841382_124841552_124848308_124848559_124859241_124859447_124873445_124873532_124901265
transcript_147632.nic	chr3	-	2915	15	NIC	ENSG00000082781.12	novel	4440	15	NA	NA	-50	-225	combination_of_known_junctions	FALSE	canonical	3	35	junction_14	459.087987876229	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGTGTAGTTCTGAGTC	-124887656	True	NA	-16	True	AATAAA	-13	NA	124887734	124763172	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_124763719_124764390_124764558_124766225_124766346_124769012_124769114_124773689_124773913_124796387_124796818_124809021_124809157_124817620_124817711_124819738_124819835_124821312_124821475_124841382_124841552_124848308_124848559_124859241_124859447_124873445_124873532_124887599
transcript_14764.nnic	chr1	-	1575	4	NNC	ENSG00000232093.1	novel	822	2	NA	NA	-5111	0	intron_retention	FALSE	canonical	1	1	junction_1	4.32049379893857	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAGTTTCAATGCTATTG	NA	False	NA	0	True	ATTAAA	-22	NA	155051229	155045190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_155045854_155045959_155046156_155049268_155049362_155050606
transcript_147646.known	chr3	-	3485	14	FSM	ENSG00000221955.11	ENST00000469902.6	3485	14	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_10	9.88274451016793	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCTAATGGTGACTCATA	-125212397	True	NA	-6	True	ATTAAA	-14	NA	125212748	125082643	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_125084053_125088309_125088371_125091438_125091557_125092100_125092199_125107480_125108127_125110188_125110336_125118768_125118857_125120598_125120687_125135668_125135783_125177742_125177975_125187236_125187429_125190374_125190522_125211298_125211395_125212699
transcript_147657.nnic	chr3	-	2902	13	NIC	ENSG00000221955.11	novel	3485	14	NA	NA	-22	-10	combination_of_known_splicesites	FALSE	canonical	1	3	junction_12	16.135494001321	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATATAGAGTGAAAAGTC	-125212739	False	NA	-13	True	AATAAA	-31	NA	125212770	125083152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_125084053_125088309_125088371_125091438_125091557_125092100_125092199_125107480_125108127_125110188_125110336_125118768_125118857_125120598_125120687_125135668_125135783_125177742_125177975_125187236_125187429_125190374_125190522_125212699
transcript_147672.nic	chr3	-	2740	11	NIC	ENSG00000221955.11	novel	3485	14	NA	NA	-56	-10	combination_of_known_junctions	FALSE	canonical	3	13	junction_6	16.636105313444	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATATAGAGTGAAAAGTC	-125212889	False	NA	-13	True	AATAAA	-31	NA	125212920	125083152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_125084053_125088309_125088371_125091438_125091557_125092100_125092199_125107480_125108127_125110188_125110336_125135668_125135783_125187236_125187429_125190374_125190522_125211298_125211395_125212699
transcript_147680.known	chr3	-	2831	8	FSM	ENSG00000221955.11	ENST00000430155.6	2831	8	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_6	5.32993088747932	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGACTCATATTCTCAAA	-125120799	False	NA	2	True	ATTAAA	-22	NA	125120854	125082635	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_125084053_125088309_125088371_125091438_125091557_125092100_125092199_125107480_125108127_125110188_125110336_125118768_125118857_125120598
transcript_14769.known	chr1	+	1817	5	FSM	ENSG00000143590.14	ENST00000368408.4	1817	5	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	25.4202183310844	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTGTGTGTGATTTCAA	155077939	True	NA	NA	False	AATAAA	-17	NA	155078836	155087538	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155079070_155085090_155085405_155085876_155085943_155086127_155086206_155086412
transcript_147691.known	chr3	-	2960	10	FSM	ENSG00000163848.20	ENST00000485866.5	2960	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_7	27.7919963609741	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTAAATAATACTGGCACT	-125374259	True	NA	NA	False	NA	NA	NA	125375313	125232327	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_125233940_125234210_125234330_125277725_125277810_125279123_125279248_125288102_125288229_125313307_125313657_125314936_125315054_125323308_125323445_125331157_125331239_125375101
transcript_147697.known	chr3	-	9514	9	FSM	ENSG00000163848.20	ENST00000360647.9	9514	9	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_6	6.89202437604511	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTGTTGTCATTGAGT	-125375310	False	NA	-2	True	AATAAA	-19	NA	125375325	125225668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_125233940_125234210_125234330_125277725_125277810_125279123_125279248_125288102_125288229_125313307_125313657_125323308_125323445_125331157_125331239_125375101
transcript_147699.known	chr3	-	2952	9	FSM	ENSG00000163848.20	ENST00000484491.5	2952	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	22.9561402461302	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGGAAAAAAAAAAGAC	-125374195	True	NA	2	True	NA	NA	NA	125375249	125232075	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_125233940_125234210_125234330_125277725_125277810_125279123_125279248_125288102_125288229_125313307_125313657_125323387_125323445_125331157_125331239_125375101
transcript_14770.known	chr1	+	1254	4	FSM	ENSG00000243364.8	ENST00000368409.8	1254	4	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	6.18241233033047	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTGCCCTCAGGCCACT	155061029	True	NA	35	True	AATAAA	-29	NA	155063739	155069553	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155063937_155066729_155067017_155067371_155067441_155068852
transcript_147702.known	chr3	-	2949	8	FSM	ENSG00000163848.20	ENST00000492394.5	2949	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	25.4301765143504	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTTAAAAAGGAAAAAAAAAA	-125374197	True	NA	-1	True	NA	NA	NA	125375251	125232078	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_125233940_125234210_125234330_125277725_125277810_125279123_125279248_125288102_125288229_125313307_125313657_125323308_125323445_125375101
transcript_14771.known	chr1	+	1052	4	FSM	ENSG00000243364.8	ENST00000427683.2	1052	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	39.0754256392543	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCCCTCCCCAATCTAC	155061050	True	NA	20	True	AATAAA	-14	NA	155063760	155069538	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155063937_155066729_155067017_155067371_155067441_155069018
transcript_147714.nnic	chr3	-	2639	15	NNC	ENSG00000114520.11	novel	2512	14	NA	NA	-31	0	at_least_one_novel_splicesite	TRUE	canonical	2	6	junction_7	89.2657406230385	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGATGATTTTTGTTA	-125515246	True	NA	-7	True	AATAAA	-21	NA	125520233	125446649	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_125447827_125451304_125451420_125453809_125453956_125457265_125457366_125460770_125460861_125469453_125469520_125470565_125470662_125476694_125476757_125480246_125480320_125489407_125489464_125497340_125497389_125497833_125497984_125498058_125498195_125504622_125504745_125520031
transcript_147716.known	chr3	-	2512	14	FSM	ENSG00000114520.11	ENST00000251775.9	2512	14	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_10	22.546992347214	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGATGATTTTTGTTA	-125515215	True	NA	-7	True	AATAAA	-21	NA	125520202	125446649	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_125447827_125451304_125451420_125453809_125453956_125457265_125457366_125460770_125460861_125469453_125469520_125476694_125476757_125480246_125480320_125489407_125489464_125497340_125497389_125497833_125497984_125498058_125498195_125504622_125504745_125520031
transcript_147718.known	chr3	-	1308	13	FSM	ENSG00000114520.11	ENST00000471751.5	1308	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	71.5333546908946	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCACTACCTAGTATAC	-125515194	True	NA	-65	True	AATAAA	-8	NA	125520181	125447710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_125447827_125451304_125451420_125453809_125453956_125457265_125457366_125460770_125460861_125469453_125469520_125476694_125476757_125480246_125480320_125489407_125489464_125497340_125497389_125497833_125497984_125498058_125498195_125520031
transcript_147724.known	chr3	-	4598	13	FSM	ENSG00000144909.8	ENST00000296220.6	4598	13	0	0	0	0	multi-exon	TRUE	canonical	3	69	junction_8	11.206087135521	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGCTTCTGTCTCTTTTA	-125594115	True	NA	NA	False	AATAAA	-17	NA	125595497	125528857	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_125530581_125531860_125532015_125538450_125538634_125547405_125547593_125552180_125552680_125560378_125560520_125563697_125563844_125567393_125567596_125576188_125576366_125578959_125579040_125579864_125580041_125582909_125582979_125594636
transcript_147732.nnic	chr3	+	675	2	NNC	ENSG00000284624.1	novel	1151	2	NA	NA	-76	-68004	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATTCTGAATTTTATTT	NA	False	NA	-21	True	AATAAA	-14	NA	125766439	125773286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_125766819_125772990
transcript_147737.known	chr3	-	805	6	FSM	ENSG00000189366.11	ENST00000340333.7	805	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	9.43186089804128	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGTGCTTGGCTCTGA	-125936857	True	NA	-3	True	AATGAA	-18	NA	125937039	125929274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_125929568_125930556_125930630_125931637_125931753_125932649_125932710_125933574_125933697_125936897
transcript_147739.known	chr3	+	2012	5	FSM	ENSG00000171084.16	ENST00000485843.2	2027	5	15	0	5	0	multi-exon	FALSE	canonical	2	7	junction_1	3.20156211871642	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACAGATGATCTGTGGCT	125916509	True	NA	NA	False	AATAAA	-31	NA	125916629	125930024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_125916818_125918863_125918927_125920824_125920906_125924965_125925116_125928494
transcript_14774.nic	chr1	+	1727	4	ISM	ENSG00000143590.14	ENST00000368408.4	1817	5	6111	0	-568	0	3prime_fragment	FALSE	canonical	3	128	junction_1	19.6185852927496	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTGTGTGTGATTTCAA	155084643	True	NA	NA	False	AATAAA	-17	NA	155084947	155087538	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_155085405_155085876_155085943_155086127_155086206_155086412
transcript_147740.known	chr3	+	1910	5	FSM	ENSG00000171084.16	ENST00000467239.5	1910	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	2.9474565306379	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACACCCCTTAATCTACA	125916499	True	NA	NA	False	AATAAA	-17	NA	125916619	125930010	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_125916720_125918863_125918927_125920824_125920906_125924965_125925116_125928494
transcript_147742.known	chr3	-	1797	12	FSM	ENSG00000114544.17	ENST00000315891.10	1797	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	17.2617189801236	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATATTGTACTTGACCCT	-126084210	True	NA	-17	True	AATAAA	-5	NA	126084304	126006372	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_126006565_126007113_126007226_126008731_126008881_126012614_126012750_126015493_126015574_126016730_126016876_126022785_126022933_126026334_126026480_126033606_126033679_126050942_126051051_126067946_126068247_126084092
transcript_147744.known	chr3	-	2182	11	FSM	ENSG00000114544.17	ENST00000360370.9	2182	11	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_10	11.883181392203	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTTATGTCTTTAAAGAT	-126083140	True	NA	-1	True	AATAAA	-21	NA	126084124	126006356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_126007226_126008731_126008881_126012614_126012750_126015493_126015574_126016730_126016876_126022785_126022933_126026334_126026480_126033606_126033679_126050942_126051051_126067946_126068247_126084092
transcript_147746.known	chr3	-	3064	23	FSM	ENSG00000144908.14	ENST00000393434.7	3064	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	2.30208313856375	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTCCACATCTCTGCGTTT	-126180555	True	NA	NA	False	AATAAA	-16	NA	126180586	126103569	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_126103847_126105725_126105926_126107140_126107247_126109943_126110110_126112781_126112881_126114556_126114657_126118004_126118099_126124363_126124452_126125615_126125722_126130222_126130294_126131383_126131535_126135534_126135663_126136763_126136884_126137812_126137961_126146834_126146927_126150405_126150532_126153443_126153582_126154553_126154644_126155401_126155504_126157342_126157509_126158404_126158640_126160852_126161003_126180475
transcript_147747.known	chr3	-	3179	23	FSM	ENSG00000144908.14	ENST00000273450.7	3179	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	2.34476734118708	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCACATCTCTGCGTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	126181186	126103568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_126103847_126105725_126105926_126107140_126107247_126109943_126110110_126112781_126112881_126114556_126114657_126118004_126118099_126124363_126124452_126125615_126125722_126130222_126130294_126131383_126131535_126135534_126135663_126136763_126136884_126137812_126137961_126146834_126146927_126150405_126150532_126153443_126153582_126154553_126154644_126155401_126155504_126157342_126157509_126158404_126158640_126160852_126161003_126180961
transcript_147748.known	chr3	+	2324	2	FSM	ENSG00000246022.4	ENST00000500232.3	2325	2	1	0	1	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGCCTTTGTTTAAATA	126180042	True	NA	NA	False	ATTAAA	-19	NA	126180064	126210169	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_126180545_126208325
transcript_14775.known	chr1	+	776	4	FSM	ENSG00000143590.14	ENST00000498667.1	776	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	61.937244225282	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCCCCATTGCTCTCCTC	155085231	True	NA	NA	False	NA	NA	NA	155085521	155086923	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155085643_155085876_155085943_155086127_155086206_155086412
transcript_147750.nnic	chr3	-	2759	3	NNC	ENSG00000163884.4	novel	2540	3	NA	NA	-57	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	9	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGGCATTCATGTGCT	-126356484	True	NA	-9	True	AATAAA	-18	NA	126357465	126342634	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_126343896_126351840_126352948_126357074
transcript_147751.known	chr3	-	2540	3	FSM	ENSG00000163884.4	ENST00000296233.4	2540	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0.5	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGGCATTCATGTGCT	-126356427	True	NA	-9	True	AATAAA	-18	NA	126357408	126342634	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_126343896_126351840_126352948_126357236
transcript_147754.known	chr3	-	3377	10	FSM	ENSG00000070476.15	ENST00000389709.8	3377	10	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	27.4752413799932	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGCGTGTATGTTTTATT	-126473852	True	NA	0	True	TATAAA	-41	NA	126475891	126437600	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_126438462_126439631_126439728_126441764_126441947_126459652_126459738_126461534_126462221_126466154_126466326_126470894_126471026_126471972_126472052_126472152_126472306_126474958
transcript_147760.nnic	chr3	-	3199	8	NIC	ENSG00000070476.15	novel	3377	10	NA	NA	-89	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_2	33.4096405492884	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGCGTGTATGTTTTATT	-126473941	True	NA	0	True	TATAAA	-41	NA	126475980	126437600	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_126438462_126439631_126439728_126461534_126462221_126466154_126466326_126470894_126471026_126471972_126472052_126472152_126472306_126474958
transcript_147765.known	chr3	-	2579	6	FSM	ENSG00000070476.15	ENST00000336332.5	2579	6	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_5	9.45304183847718	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGGGGTTTATGAGCCTT	-126473826	True	NA	NA	False	AAGAAA	-9	NA	126475865	126461082	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_126462221_126466154_126466326_126470894_126471026_126471972_126472052_126472152_126472306_126474958
transcript_147772.nnic	chr3	+	2110	4	NNC	ENSG00000180767.11	novel	1917	3	NA	NA	-95	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	14.3836326735943	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTTTGGAGTTTATCT	NA	False	NA	18	True	AATAAA	-18	NA	126524059	126543288	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_126524430_126536270_126536354_126541165_126541267_126541732
transcript_147773.known	chr3	+	1917	3	FSM	ENSG00000180767.11	ENST00000319340.7	1917	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	1.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGAGTTTATCTGCT	126523685	True	NA	21	True	AATAAA	-21	NA	126524154	126543291	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_126524430_126536270_126536354_126541732
transcript_147779.known	chr3	-	2921	16	FSM	ENSG00000197763.20	ENST00000524230.9	2921	16	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_12	6.24179461373089	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAAGTGGTTGCATGGGA	-126654792	True	NA	NA	False	CATAAA	-14	NA	126655124	126607049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_126607974_126608498_126608634_126611036_126611133_126615354_126615463_126621741_126621899_126622463_126622541_126629378_126629472_126630711_126630938_126631763_126631880_126633908_126634052_126642031_126642152_126643980_126644054_126644296_126644402_126646110_126646221_126647235_126647297_126654747
transcript_14778.known	chr1	+	763	3	FSM	ENSG00000143590.14	ENST00000470294.5	763	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	9	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCACTGCCTGCTGCTTC	155085225	True	NA	NA	False	NA	NA	NA	155085515	155086982	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155085643_155085876_155085943_155086412
transcript_147780.known	chr3	-	2351	15	FSM	ENSG00000197763.20	ENST00000523403.3	2351	15	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	13.5699247287101	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTGGTTTTCTAGTGCGT	-126654769	True	NA	43	True	TATAAA	-1	NA	126655101	126607488	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_126607974_126608498_126608634_126611036_126611133_126621741_126621899_126622463_126622541_126629378_126629472_126630711_126630938_126631763_126631880_126633908_126634052_126642031_126642152_126643980_126644054_126644296_126644402_126646110_126646221_126647235_126647297_126654747
transcript_147786.known	chr3	+	1000	8	FSM	ENSG00000159685.11	ENST00000290913.8	1000	8	0	0	0	0	multi-exon	FALSE	canonical	3	432	junction_4	30.1222000985239	357	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACTGCTGCCTACTCTGC	126696312	True	NA	37	True	AATAAA	-42	NA	126704239	126960420	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_126704400_126727077_126727187_126730560_126730631_126733077_126733223_126852646_126852731_126914679_126914751_126957415_126957552_126960195
transcript_14779.known	chr1	+	1096	4	FSM	ENSG00000243364.8	ENST00000359751.8	1096	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	48.8898989794643	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCCCTCCCCAATCTAC	155061026	True	NA	20	True	AATAAA	-14	NA	155063736	155069538	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155063937_155066729_155067017_155067371_155067441_155068998
transcript_14780.known	chr1	+	1552	5	FSM	ENSG00000169242.12	ENST00000368407.8	1552	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	3.35410196624968	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCTGCTAAGTGCGAGGC	155127476	True	NA	72	True	ATTAAA	-16	NA	155127875	155134899	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155128070_155131338_155131635_155133502_155133569_155133729_155133781_155133954
transcript_147801.nnic	chr3	-	2012	12	NNC	ENSG00000163870.16	novel	1903	12	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	72.4365781303871	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCTAATGTGGAGGTTTT	-127590405	False	NA	-12	True	AATAAA	-18	NA	127590759	127573068	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_127573789_127575184_127575266_127575402_127575506_127575748_127575810_127575939_127576051_127576184_127576256_127576616_127576697_127576820_127576894_127576989_127577077_127579739_127579873_127580021_127580164_127590409
transcript_147805.nnic	chr3	-	2092	12	NNC	ENSG00000163870.16	novel	3752	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_10	76.1904963596982	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCTAATGTGGAGGTTTT	-127589464	True	NA	-12	True	AATAAA	-18	NA	127590733	127573068	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_127573789_127575184_127575266_127575402_127575506_127575748_127575810_127575939_127576051_127576616_127576697_127576820_127576894_127576989_127577077_127579739_127579873_127580021_127580164_127587983_127588161_127590409
transcript_147807.nnic	chr3	-	1942	12	NNC	ENSG00000163870.16	novel	4235	13	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_10	65.8963624072862	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCTAATGTGGAGGTTTT	-127597917	True	NA	-12	True	AATAAA	-18	NA	127598271	127573068	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_127573789_127575184_127575266_127575402_127575506_127575748_127575810_127575939_127576051_127576616_127576697_127576820_127576894_127576989_127577077_127579739_127579873_127580021_127580164_127594799_127594934_127598054
transcript_14781.known	chr1	+	1083	5	FSM	ENSG00000169242.12	ENST00000474413.5	1083	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	15.9216833280907	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGTCCTTTCCCACCATT	155129542	False	NA	NA	False	NA	NA	NA	155129561	155134307	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155129879_155131338_155131635_155133502_155133569_155133729_155133781_155133954
transcript_147812.known	chr3	-	3752	11	FSM	ENSG00000163870.16	ENST00000355552.8	3752	11	0	0	0	0	multi-exon	TRUE	canonical	3	154	junction_4	25.4251843651133	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATGTAAGTATGCATGCA	-127589464	True	NA	NA	False	AATAAA	-43	NA	127590733	127571231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_127573789_127575184_127575266_127575402_127575506_127575748_127575810_127575939_127576051_127576616_127576697_127576820_127576894_127576989_127577077_127579739_127579873_127580021_127580164_127590409
transcript_14782.known	chr1	+	1444	4	FSM	ENSG00000169242.12	ENST00000368406.2	1444	4	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_2	17.9071680247511	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTTTTCTGCCACTCCA	155127476	True	NA	30	True	AATAAA	-19	NA	155127875	155134857	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155128070_155131338_155131635_155133729_155133781_155133954
transcript_147821.known	chr3	-	1831	10	FSM	ENSG00000163870.16	ENST00000393400.6	1831	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	61.3985160877507	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATAAAAAGGAAAAGGAGC	-127589465	True	NA	14	True	NA	NA	NA	127590734	127573092	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_127573789_127575184_127575266_127575402_127575506_127575939_127576051_127576616_127576697_127576820_127576894_127576989_127577077_127579739_127579873_127580021_127580164_127590409
transcript_147835.nnic	chr3	-	953	3	NNC	ENSG00000163870.16	novel	4235	13	NA	NA	-4	-12331	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	1.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCGCCTCGTGTTGTGTGT	-127597917	True	NA	NA	False	AAAACA	-14	NA	127598271	127592352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_127592955_127594799_127594934_127598054
transcript_147842.known	chr3	+	3434	16	FSM	ENSG00000073111.14	ENST00000265056.12	3434	16	0	0	0	0	multi-exon	FALSE	canonical	3	625	junction_1	108.83026539831	993	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGTATCTGTTGGCTTC	127581051	True	NA	9	True	AATAAA	-18	NA	127598410	127622436	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_127598473_127599317_127599548_127604607_127604784_127604895_127605157_127606117_127606338_127606609_127606818_127608381_127608517_127608831_127609024_127615861_127615956_127616867_127617119_127617278_127617406_127617968_127618082_127619026_127619279_127620697_127620881_127621072_127621229_127621662
transcript_14785.known	chr1	+	1298	6	FSM	ENSG00000169241.19	ENST00000368404.9	1298	6	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_3	77.8372661390417	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGATGGTTCATTCTCTAC	155132158	True	NA	7	True	AATAAA	-19	NA	155135851	155138853	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155135992_155136298_155136377_155136827_155136952_155137560_155137723_155137978_155138099_155138179
transcript_14786.known	chr1	+	890	6	FSM	ENSG00000169241.19	ENST00000488609.5	890	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	153.899967511368	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGATTGGGGCCTAGGA	155132173	True	NA	NA	False	GATAAA	-28	NA	155135866	155138440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155135992_155136298_155136397_155136827_155136952_155137560_155137723_155137978_155138099_155138179
transcript_147874.known	chr3	+	2175	8	FSM	ENSG00000114631.11	ENST00000342480.7	2175	8	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_4	29.0073882214268	1632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTGCCTTCTTGACTCAT	127624178	True	NA	17	True	ATTAAA	-30	NA	127629184	127672802	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_127629290_127639244_127639524_127660377_127661160_127662236_127662312_127668440_127668598_127669140_127669203_127671433_127671614_127672267
transcript_147877.nic	chr3	+	2882	7	ISM	ENSG00000114631.11	ENST00000342480.7	2175	8	-53	0	-53	0	intron_retention	FALSE	canonical	3	341	junction_4	31.1791418882703	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTGCCTTCTTGACTCAT	127624125	True	NA	17	True	ATTAAA	-30	NA	127629131	127672802	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_127629290_127639244_127639524_127660377_127661160_127662236_127662312_127668440_127668598_127669140_127669203_127671433
transcript_14789.known	chr1	+	1137	5	FSM	ENSG00000169241.19	ENST00000303343.12	1137	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	142.317207322235	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGATGGTTCATTCTCTA	155132156	True	NA	6	True	AATAAA	-18	NA	155135849	155138852	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155135992_155136298_155136377_155136827_155136952_155137978_155138099_155138179
transcript_147890.known	chr3	+	1915	12	FSM	ENSG00000114626.18	ENST00000475042.5	1915	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	9.93699157959252	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGAGCCTGTGTCCTGGG	127672524	True	NA	11	True	AATAAA	-20	NA	127672957	127680920	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_127673082_127674390_127674419_127674544_127674601_127675969_127676115_127676271_127676432_127676535_127676582_127676966_127677084_127677167_127677287_127677464_127677564_127677675_127677844_127679984_127680186_127680268
transcript_147892.known	chr3	+	1962	12	FSM	ENSG00000114626.18	ENST00000232744.13	1962	12	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	6.91626421876736	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTCCTGGGGTACAG	127672518	True	NA	17	True	AATAAA	-26	NA	127672951	127680926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_127673082_127674390_127674454_127674544_127674601_127675969_127676115_127676271_127676432_127676535_127676582_127676966_127677084_127677167_127677287_127677464_127677564_127677675_127677844_127679984_127680186_127680268
transcript_147895.known	chr3	+	1961	12	FSM	ENSG00000114626.18	ENST00000453791.6	1961	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	12.2804689387406	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGAGCCTGTGTCCTGGG	127672524	True	NA	11	True	AATAAA	-20	NA	127672957	127680920	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_127673082_127674344_127674419_127674544_127674601_127675969_127676115_127676271_127676432_127676535_127676582_127676966_127677084_127677167_127677287_127677464_127677564_127677675_127677844_127679984_127680186_127680268
transcript_14790.known	chr1	+	1166	5	FSM	ENSG00000169241.19	ENST00000650403.1	1166	5	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_2	114.180504027614	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACGATGGTTCATTCTCT	155132164	True	NA	5	True	AATAAA	-17	NA	155135857	155138851	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155135992_155136298_155136377_155137560_155137723_155137978_155138099_155138179
transcript_147900.known	chr3	+	2065	11	FSM	ENSG00000114626.18	ENST00000468137.5	2065	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	9.59426912276282	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGGAGCATGAGCCTGTG	127674093	False	NA	4	True	AATAAA	-13	NA	127674109	127680913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_127674419_127674544_127674601_127675969_127676115_127676271_127676432_127676535_127676582_127676966_127677084_127677167_127677287_127677464_127677564_127677675_127677844_127679984_127680186_127680268
transcript_147913.known	chr3	-	4941	8	FSM	ENSG00000074416.16	ENST00000265052.10	4271	8	-670	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1.92724822331886	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGTCTGTCTGTCCATCA	NA	False	NA	-3	True	AATAAA	-17	NA	127823185	127689065	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_127692324_127694974_127695191_127710575_127710666_127721052_127721164_127722429_127722567_127781788_127781896_127821693_127821839_127822308
transcript_147920.known	chr3	+	2205	7	FSM	ENSG00000132394.11	ENST00000254730.11	2205	7	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_4	20.7799315580094	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTCTCTCTCTCTGTG	128151572	True	NA	19	True	AATAAA	-26	NA	128153480	128408646	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_128153824_128246835_128247044_128262127_128262225_128264616_128264782_128341232_128341890_128358216_128358374_128408068
transcript_147927.nic	chr3	+	2085	6	NIC	ENSG00000132394.11	novel	2205	7	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_3	57.5096513639233	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTCTCTCTCTCTGTG	128151527	True	NA	19	True	AATAAA	-26	NA	128153435	128408646	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_128153824_128246835_128247044_128262127_128262225_128341232_128341890_128358216_128358374_128408068
transcript_147930.known	chr3	+	1859	5	FSM	ENSG00000132394.11	ENST00000483457.1	1859	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	87.4113836980058	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTACTGGTGTCTCTCTCTC	128151592	True	NA	15	True	AATAAA	-22	NA	128153500	128408642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_128153824_128246835_128247044_128262127_128262225_128341232_128341890_128408068
transcript_14794.known	chr1	+	1003	4	FSM	ENSG00000169241.19	ENST00000368405.7	1003	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	158.34421015272	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACGATGGTTCATTCTCT	155132165	True	NA	5	True	AATAAA	-17	NA	155135858	155138851	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155135992_155136298_155136377_155137978_155138099_155138179
transcript_147950.known	chr3	+	3568	12	FSM	ENSG00000058262.10	ENST00000243253.8	3568	12	0	0	0	0	multi-exon	FALSE	canonical	3	924	junction_8	53.6408318631917	2139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATCATGTTCTCTTGAT	128039908	True	NA	22	True	AATAAA	-20	NA	128052436	128071683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_128052560_128052834_128052903_128055515_128055582_128055672_128055752_128056708_128056841_128060101_128060212_128060507_128060662_128064876_128065038_128066953_128067152_128067420_128067613_128067982_128068060_128069475
transcript_14796.nic	chr1	+	902	3	ISM	ENSG00000169241.19	ENST00000368405.7	1003	4	410	-2	-47	0	3prime_fragment	FALSE	canonical	3	64	junction_1	187	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGATGGTTCATTCTCTAC	155132575	False	NA	7	True	AATAAA	-19	NA	155136268	155138853	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_155136377_155137978_155138099_155138179
transcript_147967.known	chr3	-	1899	11	FSM	ENSG00000175792.12	ENST00000322623.10	1899	11	0	0	0	0	multi-exon	FALSE	canonical	3	884	junction_6	75.6198386668472	600	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGTTTTACCTAATGTC	-128107832	True	NA	NA	False	NA	NA	NA	128123812	128080809	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_128081410_128082482_128082575_128087705_128087809_128097299_128097499_128098881_128098946_128100594_128100745_128101558_128101649_128104772_128104925_128112887_128113021_128119327_128119415_128123583
transcript_14797.known	chr1	+	596	3	FSM	ENSG00000169241.19	ENST00000484027.1	596	3	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	210	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACTTTGGGAGGCCAAGG	155136289	True	NA	NA	False	NA	NA	NA	155136315	155138574	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155136397_155137978_155138099_155138179
transcript_14798.known	chr1	+	1245	5	FSM	ENSG00000169241.19	ENST00000622581.4	1245	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	173.046958944675	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTTCATTCTCTACTCAT	155132118	True	NA	11	True	AATAAA	-23	NA	155135811	155138857	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155135973_155136827_155136952_155137560_155137723_155137978_155138099_155138179
transcript_14799.known	chr1	-	396	2	FSM	ENSG00000179085.8	ENST00000368400.5	396	2	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_1	0	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGTTTAGTTTGAGTATG	-155138148	True	NA	-21	True	ATTAAA	-20	NA	155140531	155139890	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155140246_155140490
transcript_14800.known	chr1	-	486	2	FSM	ENSG00000179085.8	ENST00000341298.3	486	2	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGTTTAGTTTGAGTATG	NA	False	NA	-21	True	ATTAAA	-20	NA	155140595	155139890	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155140272_155140490
transcript_148005.known	chr3	-	2284	10	FSM	ENSG00000163902.12	ENST00000296255.8	2284	10	0	0	0	0	multi-exon	FALSE	canonical	3	1424	junction_5	72.1840924988085	1552	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTGGTCTGTTGAAGAT	-128617389	True	NA	-21	True	AATAAA	-20	NA	128650818	128619968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_128620594_128622163_128622410_128625533_128625654_128625873_128626013_128626732_128626833_128629950_128630144_128631947_128632158_128637798_128638106_128644918_128644984_128650539
transcript_148027.known	chr3	+	2185	6	FSM	ENSG00000075785.14	ENST00000265062.8	2185	6	0	0	0	0	multi-exon	FALSE	canonical	3	1263	junction_5	68.6684789404862	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGCCTTTGCCAGAGTC	128703253	True	NA	13	True	AATAAA	-20	NA	128726182	128814798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_128726360_128795359_128795421_128797942_128798070_128806371_128806591_128807542_128807672_128813326
transcript_148031.known	chr3	+	2985	6	FSM	ENSG00000075785.14	ENST00000675864.1	2985	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	555.794782271298	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATACATGCACAAACATT	128703206	True	NA	NA	False	AAAAAG	-36	NA	128726135	128825942	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_128726360_128795359_128795421_128797942_128798070_128806371_128806591_128807542_128807672_128823717
transcript_148034.known	chr3	+	3182	5	FSM	ENSG00000075785.14	ENST00000675712.1	3182	5	0	0	0	0	multi-exon	FALSE	canonical	3	1263	junction_4	74.5519952784632	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCTGCCTTTGCCAGAG	128703206	True	NA	11	True	AATAAA	-18	NA	128726135	128814796	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_128726360_128795359_128795421_128797942_128798070_128806371_128807672_128813326
transcript_148036.known	chr3	+	2122	5	FSM	ENSG00000075785.14	ENST00000674748.1	2122	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	583.810917592331	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCTGCCTTTGCCAGAG	128703253	True	NA	11	True	AATAAA	-18	NA	128726182	128814796	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_128726360_128797942_128798070_128806371_128806591_128807542_128807672_128813326
transcript_148038.known	chr3	+	552	3	FSM	ENSG00000075785.14	ENST00000491681.1	552	3	0	0	0	0	multi-exon	FALSE	canonical	3	1337	junction_2	43	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACATCTTTGTCTCACC	128726328	False	NA	NA	False	NA	NA	NA	128726351	128798425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_128726360_128795359_128795421_128797942
transcript_148039.known	chr3	+	1217	6	FSM	ENSG00000075785.14	ENST00000490093.6	1217	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	551.644958283859	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTACAGTTAATCTGTGT	128703227	True	NA	-4	True	NA	NA	NA	128726156	128813791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_128726360_128795359_128795421_128797942_128798070_128806371_128806616_128807554_128807672_128813326
transcript_148040.known	chr3	+	2360	7	FSM	ENSG00000075785.14	ENST00000675342.1	2360	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	635.676739126631	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCTGCCTTTGCCAGAG	128703233	True	NA	11	True	AATAAA	-18	NA	128726162	128814796	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_128726360_128788913_128789071_128795359_128795421_128797942_128798070_128806371_128806591_128807542_128807672_128813326
transcript_148042.known	chr3	+	2596	19	FSM	ENSG00000177646.20	ENST00000681367.1	2596	19	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_17	73.4924200341038	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACAATCTGTGTACTGT	128875750	True	NA	5	True	TATAAA	-2	NA	128879595	128913092	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_128879842_128884652_128884747_128893554_128893657_128895309_128895417_128896435_128896537_128897631_128897711_128899286_128899462_128901275_128901350_128902552_128902629_128904061_128904133_128904385_128904506_128906120_128906250_128908184_128908265_128908972_128909100_128909343_128909422_128910020_128910150_128910390_128910540_128910740_128910814_128912506
transcript_148048.known	chr3	+	2538	18	FSM	ENSG00000177646.20	ENST00000680636.1	2538	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	58.4122682283848	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTAGCCTTTGCTGTAC	128875768	True	NA	20	True	TATAAA	-17	NA	128879613	128913107	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_128879842_128884652_128884747_128893554_128893657_128895309_128895417_128896435_128896537_128897631_128897711_128899286_128899462_128901275_128901350_128902552_128902629_128904061_128904133_128904385_128904506_128906120_128906250_128908184_128908265_128908972_128909100_128909343_128909422_128909926_128910150_128910740_128910814_128912506
transcript_148050.known	chr3	+	2445	18	FSM	ENSG00000177646.20	ENST00000308982.12	2445	18	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	20.3178888912342	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGCTGTACTTGTCAC	128875774	True	NA	27	True	TATAAA	-24	NA	128879619	128913114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_128879842_128884652_128884747_128893554_128893657_128895309_128895417_128896435_128896537_128897631_128897711_128899286_128899462_128901275_128901350_128902552_128902629_128904061_128904133_128904385_128904506_128906120_128906250_128908184_128908265_128908972_128909100_128909343_128909422_128910020_128910150_128910740_128910814_128912506
transcript_148052.known	chr3	+	2431	18	FSM	ENSG00000177646.20	ENST00000511227.5	2431	18	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	51.7675132928553	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGTGAGGTGGGTGGGGA	128875777	True	NA	-73	True	GGGGCT	-17	NA	128879622	128912927	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_128880018_128884652_128884747_128893554_128893657_128895309_128895417_128896435_128896537_128897631_128897711_128899286_128899462_128901275_128901350_128902552_128902629_128904061_128904133_128904385_128904506_128906120_128906250_128908184_128908265_128908972_128909100_128909343_128909422_128910020_128910150_128910740_128910814_128912506
transcript_148057.known	chr3	+	2568	18	FSM	ENSG00000177646.20	ENST00000679431.1	2568	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	75.9040552641052	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTACTGTTAGCCTTTGC	128875797	True	NA	15	True	TATAAA	-12	NA	128879642	128913102	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_128880018_128884674_128884747_128893554_128893657_128895309_128895417_128896435_128896537_128897631_128897711_128899286_128899462_128901275_128901350_128902552_128902633_128904061_128904133_128904385_128904506_128906120_128906250_128908184_128908265_128908972_128909100_128909343_128909422_128910020_128910150_128910740_128910814_128912506
transcript_148060.known	chr3	+	3036	17	FSM	ENSG00000177646.20	ENST00000511325.2	3036	17	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	20.7378541259697	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTACTGTTAGCCTTT	128875768	True	NA	13	True	TATAAA	-10	NA	128879613	128913100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_128879842_128884652_128884747_128893554_128893657_128895309_128895417_128896435_128896537_128897631_128897711_128899286_128899462_128901275_128901350_128902552_128902629_128904061_128904133_128904385_128904506_128906120_128906250_128908184_128908265_128908972_128909100_128909343_128910150_128910740_128910814_128912506
transcript_148061.known	chr3	+	3144	17	FSM	ENSG00000177646.20	ENST00000681319.1	3144	17	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	20.2074205120297	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTGTACTGTTAGCCTT	128875768	True	NA	12	True	TATAAA	-9	NA	128879613	128913099	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_128879842_128884652_128884747_128893554_128893657_128895309_128895417_128896435_128896537_128897631_128897711_128899286_128899462_128901275_128901350_128902552_128902629_128904061_128904133_128904385_128904506_128906120_128906250_128908184_128909100_128909343_128909422_128910020_128910150_128910740_128910814_128912506
transcript_148066.known	chr3	+	2401	17	FSM	ENSG00000177646.20	ENST00000505867.5	2401	17	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	59.5215297182457	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGGGTCATTCATTTAA	128875800	True	NA	14	True	AAGAAA	-15	NA	128879645	128913014	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_128880018_128893554_128893657_128895309_128895417_128896435_128896537_128897631_128897711_128899286_128899462_128901275_128901350_128902552_128902629_128904061_128904133_128904385_128904506_128906120_128906250_128908184_128908265_128908972_128909100_128909343_128909422_128910020_128910150_128910740_128910814_128912506
transcript_148080.known	chr3	+	2058	11	FSM	ENSG00000177646.20	ENST00000681589.1	2058	11	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	64.929885260949	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCCATCTCTACAAAAAATA	128875808	True	NA	NA	False	AAAACA	-42	NA	128879653	128905200	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_128880018_128884652_128884747_128893554_128893657_128895309_128895417_128896435_128896537_128897631_128897711_128899286_128899462_128901275_128901350_128902552_128902629_128904061_128904133_128904385
transcript_148085.known	chr3	+	4096	18	FSM	ENSG00000177646.20	ENST00000680764.1	4096	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	76.0643053390538	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTACTGTTAGCCTTTGC	128875797	True	NA	15	True	TATAAA	-12	NA	128879642	128913102	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_128881524_128884652_128884747_128893554_128893657_128895309_128895417_128896435_128896537_128897631_128897711_128899286_128899462_128901275_128901350_128902552_128902633_128904061_128904133_128904385_128904506_128906120_128906250_128908184_128908265_128908972_128909100_128909343_128909422_128910020_128910150_128910740_128910814_128912506
transcript_148087.known	chr3	-	1704	12	FSM	ENSG00000240682.10	ENST00000273541.12	1704	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	66.3942644142356	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCACGCAACCCACAAGT	-129158730	True	NA	NA	False	NA	NA	NA	129161048	129129373	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_129130189_129130549_129130637_129134073_129134196_129134831_129134955_129137130_129137197_129140367_129140486_129145760_129145874_129156632_129156676_129156854_129156921_129158507_129158560_129159153_129159177_129160972
transcript_148088.known	chr3	-	988	11	FSM	ENSG00000240682.10	ENST00000393292.7	988	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	50.6822454119783	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACACAGGCTGGTGCTGC	-129158719	True	NA	NA	False	NA	NA	NA	129161037	129130016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_129130189_129130549_129130637_129134073_129134196_129134827_129134955_129140367_129140486_129145760_129145874_129156632_129156676_129156854_129156921_129158507_129158560_129159153_129159177_129160972
transcript_148099.known	chr3	-	4230	4	FSM	ENSG00000172780.17	ENST00000393304.5	4230	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	67.8101926130742	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGCCCAGGACTGGTTCT	-129121428	True	NA	-7	True	ATTAAA	-21	NA	129121804	129087568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_129091347_129094985_129095170_129121285_129121493_129121743
transcript_148101.known	chr3	-	4478	3	FSM	ENSG00000172780.17	ENST00000315150.10	4478	3	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_2	9	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGCGCCCAGGACTGGT	-129121428	True	NA	-10	True	ATTAAA	-18	NA	129121804	129087571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_129091347_129094985_129095170_129121285
transcript_148103.known	chr3	-	4215	4	FSM	ENSG00000172780.17	ENST00000393305.5	4215	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_3	68.7475252079827	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGCCCAGGACTGGTTCT	-129122076	True	NA	-7	True	ATTAAA	-21	NA	129122150	129087568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_129091347_129094985_129095170_129121285_129121493_129122104
transcript_148104.known	chr3	-	1549	5	FSM	ENSG00000169714.17	ENST00000504813.5	1549	5	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_3	2617.06194997367	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTCTTTTTGTTTGTTT	-129109150	True	NA	-21	True	AATAAA	-27	NA	129183922	129169568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_129170571_129171078_129171278_129171445_129171509_129171633_129171772_129183775
transcript_148105.known	chr3	-	1516	5	FSM	ENSG00000169714.17	ENST00000500450.6	1516	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	2715.1223153847	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTCTTTTTGTTTGTTT	-129109138	True	NA	-21	True	AATAAA	-27	NA	129183910	129169568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_129170571_129171078_129171278_129171445_129171509_129171654_129171772_129183775
transcript_148106.known	chr3	-	1040	5	FSM	ENSG00000169714.17	ENST00000441626.6	1040	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2738.93112135008	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTCTATGAACTTCCATA	-129109138	True	NA	NA	False	NA	NA	NA	129183910	129170101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_129170571_129171078_129171284_129171445_129171539_129171633_129171772_129183775
transcript_148107.known	chr3	-	1623	5	FSM	ENSG00000169714.17	ENST00000446936.6	1623	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2832.97595295124	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTGACAGTTTGGACTT	-129109127	True	NA	-9	True	ATTAAA	-21	NA	129183899	129169486	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_129170571_129171078_129171284_129171445_129171539_129171654_129171772_129183775
transcript_14812.known	chr1	+	3127	10	FSM	ENSG00000163462.19	ENST00000368382.5	3127	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.1980390271856	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGCAATCATTCCTGTGAG	155173176	True	NA	26	True	AATAAA	-33	NA	155173908	155184969	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155174040_155175385_155175648_155175887_155176232_155176931_155177076_155177194_155177291_155178001_155178256_155178491_155178614_155179631_155179935_155181851_155182150_155183796
transcript_148130.known	chr3	+	3078	24	FSM	ENSG00000181789.14	ENST00000314797.10	3078	24	0	0	0	0	multi-exon	TRUE	canonical	2	379	junction_5	66.3488517784983	1104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGCTACTTCTGCAGAC	129240789	True	NA	26	True	AATAAA	-20	NA	129249605	129277773	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_129249747_129250681_129250735_129252280_129252362_129252622_129252695_129252875_129252956_129254667_129254744_129254984_129255078_129256067_129256155_129257469_129257628_129257726_129257861_129260332_129260401_129260618_129260808_129263903_129264000_129265548_129265793_129267023_129267100_129267936_129268041_129268494_129268621_129268931_129269001_129271766_129271910_129272243_129272416_129272806_129272905_129274837_129274977_129275193_129275293_129277293
transcript_148149.known	chr3	+	3231	23	FSM	ENSG00000181789.14	ENST00000515725.5	3231	23	0	0	0	0	multi-exon	FALSE	canonical	2	379	junction_4	67.0691021470387	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATTGCTACTTCTGCAG	129240815	True	NA	24	True	AATAAA	-18	NA	129249631	129277771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_129249747_129250681_129250735_129252280_129252362_129252622_129252956_129254667_129254744_129254984_129255078_129256067_129256155_129257469_129257628_129257726_129257861_129260332_129260401_129260618_129260808_129263903_129264000_129265548_129265793_129267023_129267100_129267936_129268041_129268494_129268621_129268931_129269001_129271766_129271910_129272243_129272416_129272806_129272905_129274837_129274977_129275193_129275293_129277293
transcript_148169.known	chr3	-	1030	1	FSM	ENSG00000286729.1	ENST00000652851.1	1030	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTACAGGGATAAGATGGT	NA	False	NA	NA	False	AATAAA	-13	NA	129278782	129277752	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_129277800_129278800
transcript_148173.known	chr3	+	2485	7	FSM	ENSG00000183624.14	ENST00000383463.9	2485	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	195.255743975832	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTTTGTTTTTCATTAT	129275392	True	NA	NA	False	AATAAA	-15	NA	129278869	129306186	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_129278906_129279709_129279916_129288853_129288998_129290678_129290805_129298353_129298536_129301949_129302143_129304588
transcript_148177.known	chr3	+	1952	7	FSM	ENSG00000183624.14	ENST00000502878.6	1952	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	209.512927206573	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTATTATGTTTCTTTT	129275478	True	NA	NA	False	GGGGCT	-35	NA	129278955	129305441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_129279204_129279709_129279916_129288853_129288998_129290678_129290805_129298353_129298536_129301949_129302143_129304588
transcript_14818.known	chr1	+	3082	10	FSM	ENSG00000163462.19	ENST00000611379.1	3082	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	9.97899027525231	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAATCATTCCTGTGAGTT	155174443	True	NA	28	True	AATAAA	-35	NA	155174753	155184971	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155174838_155175385_155175648_155175887_155176232_155176931_155177076_155177194_155177291_155178001_155178256_155178491_155178614_155179631_155179935_155181851_155182150_155183796
transcript_148181.known	chr3	+	1763	7	FSM	ENSG00000183624.14	ENST00000389735.7	1763	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	229.376267783357	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTCCTGAATAAATTG	129275496	True	NA	14	True	AATAAA	-25	NA	129278973	129305262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_129279212_129279709_129279916_129288853_129288998_129290678_129290805_129298353_129298536_129301949_129302143_129304588
transcript_148183.nic	chr3	+	1664	7	NIC	ENSG00000183624.14	novel	1763	7	NA	NA	25	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	235.795815625864	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTCCTGAATAAATTG	129275427	True	NA	14	True	AATAAA	-25	NA	129278904	129305262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_129279044_129279709_129279916_129288853_129288998_129290678_129290805_129298353_129298536_129301949_129302143_129304588
transcript_148186.known	chr3	+	1490	6	FSM	ENSG00000183624.14	ENST00000417226.6	1490	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	231.095131926226	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGCCTACATTTTGGAA	129275368	True	NA	45	True	AATAAA	-15	NA	129278845	129305293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_129278906_129279709_129279916_129288853_129288998_129298353_129298536_129301949_129302143_129304588
transcript_148188.known	chr3	+	948	6	FSM	ENSG00000183624.14	ENST00000509042.5	948	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	207.417453460407	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGACTCCTAGAGCAATGG	129275350	True	NA	NA	False	NA	NA	NA	129278827	129304751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_129278906_129279709_129279916_129290678_129290805_129298353_129298536_129301949_129302143_129304588
transcript_148190.nic	chr3	+	2629	6	NIC	ENSG00000183624.14	novel	2485	7	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	236.417935021859	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTTTGTTTTTCATTAT	129275420	True	NA	NA	False	AATAAA	-15	NA	129278897	129306186	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_129279204_129279709_129279916_129288853_129288998_129298353_129298536_129301949_129302143_129304588
transcript_14820.known	chr1	+	1703	9	FSM	ENSG00000163462.19	ENST00000543729.5	1703	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	9.77800465330223	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGGGCAGGCACAGGTG	155173158	True	NA	NA	False	AATACA	-38	NA	155173890	155179935	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155174030_155175385_155175648_155175887_155176232_155176931_155177076_155177194_155177291_155178001_155178256_155178491_155178614_155178808_155178847_155179631
transcript_148206.nic	chr3	+	1345	5	NIC	ENSG00000206417.8	novel	917	4	NA	NA	-303	357	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	13.8811923119017	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTCTCAGGTAGTT	129314898	True	NA	5	True	ATTAAA	-18	NA	129315088	129318668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_129315639_129315805_129315904_129317153_129317346_129317931_129318311_129318542
transcript_148211.known	chr3	-	1516	1	FSM	ENSG00000184897.6	ENST00000333762.6	1516	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	447	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTCTCGTTTAATCTGA	-129315901	False	NA	-6	True	AATAAA	-17	NA	129316286	129314770	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_129314800_129316300
transcript_148212.nic	chr3	-	666	3	ISM	ENSG00000251474.7	ENST00000510078.5	2161	5	-48	13380	-14	-84	5prime_fragment	FALSE	canonical	2	19	junction_1	1.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAAAGCACGTGCTGCCC	-129398093	True	NA	NA	False	NA	NA	NA	129399453	129396301	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_129396421_129397039_129397141_129399007
transcript_148213.known	chr3	-	2139	9	FSM	ENSG00000172771.12	ENST00000505956.6	2139	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	0.968245836551854	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGACCCAGCTGATGTG	-129428616	True	NA	NA	False	CATAAA	-26	NA	129428636	129401320	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_129401852_129402522_129402580_129404249_129404404_129408644_129408859_129411157_129411355_129415244_129415402_129418253_129418449_129421366_129421804_129428439
transcript_148215.known	chr3	+	4075	30	FSM	ENSG00000163913.14	ENST00000348417.7	4075	30	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	28.817355056243	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGGCTCCGAGTTGTTCG	129440126	False	NA	NA	False	NA	NA	NA	129440223	129520507	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_129440372_129449870_129449938_129451913_129451999_129458598_129458678_129461227_129461305_129463559_129463627_129464634_129464782_129466889_129467067_129469341_129469418_129476314_129476507_129476662_129476802_129478015_129478219_129479784_129479923_129481529_129481695_129483484_129483683_129488256_129488398_129492140_129492195_129495445_129495608_129499901_129500069_129502710_129502883_129504318_129504422_129506408_129506550_129507667_129507763_129512311_129512413_129514388_129514555_129515487_129515600_129517468_129517595_129519106_129519187_129519567_129519733_129520175
transcript_148219.known	chr3	+	3841	29	FSM	ENSG00000163913.14	ENST00000347300.6	3841	29	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	19.4976450697336	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTCTTGCCCAGATGA	NA	False	NA	18	True	AATAAA	-18	NA	129440124	129520351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_129440372_129449870_129449938_129451913_129451999_129458598_129458678_129461227_129461305_129463559_129463627_129464634_129464782_129469341_129469418_129476314_129476507_129476662_129476802_129478015_129478219_129479784_129479923_129481529_129481695_129483484_129483683_129488256_129488398_129492140_129492195_129495445_129495608_129499901_129500069_129502710_129502883_129504318_129504422_129506408_129506550_129507667_129507763_129512311_129512413_129514388_129514555_129515487_129515600_129517468_129517595_129519106_129519187_129519567_129519733_129520175
transcript_148222.nic	chr3	+	3821	28	FSM	ENSG00000163913.14	ENST00000691583.1	3922	28	-40	141	-20	0	multi-exon	FALSE	canonical	3	14	junction_15	24.2584393415301	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAATGTGTTTCTTGCCC	NA	False	NA	12	True	AATAAA	-12	NA	129440084	129520345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_129440372_129449870_129449938_129451913_129451999_129458598_129458678_129461227_129461305_129463559_129463627_129464634_129464782_129469341_129469418_129476314_129476507_129476662_129476802_129478015_129478219_129479784_129479923_129481529_129481695_129483484_129483683_129488256_129488398_129495445_129495608_129499901_129500069_129502710_129502883_129504318_129504422_129506408_129506550_129507667_129507763_129512311_129512413_129514388_129514555_129515487_129515600_129517468_129517595_129519106_129519187_129519567_129519733_129520175
transcript_148228.known	chr3	+	3873	28	FSM	ENSG00000163913.14	ENST00000440957.7	4007	28	89	45	0	0	multi-exon	FALSE	canonical	0	0	junction_3	24.8578399806741	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAATGTACATATATTTTC	NA	False	NA	129	True	NA	NA	NA	129440124	129520462	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_129440372_129449870_129449938_129451913_129451999_129461227_129461305_129463559_129463627_129464634_129464782_129469341_129469418_129476314_129476507_129476662_129476802_129478015_129478219_129479784_129479923_129481529_129481695_129483484_129483683_129488256_129488398_129492140_129492195_129495445_129495608_129499901_129500069_129502710_129502883_129504318_129504422_129506408_129506550_129507667_129507763_129512311_129512413_129514388_129514555_129515487_129515600_129517468_129517595_129519106_129519187_129519567_129519733_129520175
transcript_148239.known	chr3	+	3569	27	FSM	ENSG00000163913.14	ENST00000349441.6	3569	27	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_19	23.4606557210984	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTCTTGCCCAGATGA	129440007	True	NA	18	True	AATAAA	-18	NA	129440243	129520351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_129440372_129449870_129449938_129451913_129451999_129463559_129463627_129464634_129464782_129469341_129469418_129476314_129476507_129476662_129476802_129478015_129478219_129479784_129479923_129481529_129481695_129483484_129483683_129488256_129488398_129492140_129492195_129495445_129495608_129499901_129500069_129502710_129502883_129504318_129504422_129506408_129506550_129507664_129507763_129512311_129512413_129514388_129514555_129515487_129515600_129517468_129517595_129519106_129519187_129519567_129519733_129520175
transcript_148243.nic	chr3	+	3437	26	NIC	ENSG00000163913.14	novel	4151	31	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_4	26.6606526551771	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAATGTGTTTCTTGCCC	129440122	False	NA	12	True	AATAAA	-12	NA	129440219	129520345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_129440372_129449870_129449938_129451913_129451999_129463559_129463627_129469341_129469418_129476314_129476507_129476662_129476802_129478015_129478219_129479784_129479923_129481529_129481695_129483484_129483683_129488256_129488398_129492140_129492195_129495445_129495608_129499901_129500069_129502710_129502883_129504318_129504422_129506408_129506550_129507667_129507763_129512311_129512413_129514388_129514555_129515487_129515600_129517468_129517595_129519106_129519187_129519567_129519733_129520175
transcript_148251.known	chr3	-	2470	8	FSM	ENSG00000129071.10	ENST00000249910.5	2470	8	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_5	74.6532118586757	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGATTCCTCTGGCAT	-129434910	True	NA	NA	False	AATAAA	-23	NA	129440009	129430949	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_129431579_129432502_129432607_129433097_129433248_129433849_129433985_129434061_129434137_129436442_129437309_129437719_129437951_129439729
transcript_148253.known	chr3	-	2394	8	FSM	ENSG00000129071.10	ENST00000429544.7	2394	8	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_5	35.0934612201214	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGATTCCTCTGGCATTGT	-129434849	True	NA	NA	False	AATAAA	-26	NA	129439948	129430946	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_129431579_129432502_129432607_129433097_129433248_129433849_129433985_129434061_129434137_129436460_129437309_129437719_129437951_129439729
transcript_14826.known	chr1	-	523	5	FSM	ENSG00000163463.13	ENST00000295682.6	523	5	0	0	0	0	multi-exon	FALSE	canonical	3	1334	junction_4	196.278501115125	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGAGTTGTGATATG	-155156819	True	NA	-15	True	AATAAA	-15	NA	155173304	155169407	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155169561_155169790_155169858_155172564_155172629_155172737_155172893_155173220
transcript_148260.known	chr3	-	2099	8	FSM	ENSG00000129071.10	ENST00000503197.5	2099	8	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	106.566832532071	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGGCTTTTCCAATGATGA	-129434908	True	NA	0	True	AATAAA	-29	NA	129440007	129431265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_129431579_129432555_129432607_129433097_129433248_129433849_129433985_129434061_129434137_129436442_129437309_129437719_129437951_129439729
transcript_148262.known	chr3	-	2194	7	FSM	ENSG00000129071.10	ENST00000507208.1	2194	7	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_4	80.6322240518985	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGCAGGAAGGTTTGGGC	-129434936	True	NA	NA	False	NA	NA	NA	129440035	129432175	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_129432607_129433097_129433248_129433849_129433985_129434061_129434137_129436442_129437309_129437719_129437951_129439729
transcript_14827.known	chr1	-	598	5	FSM	ENSG00000163463.13	ENST00000491084.5	598	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_4	740.438046024109	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGAGTTGTGATATG	-155173462	False	NA	-15	True	AATAAA	-15	NA	155173475	155169407	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155169561_155169790_155169858_155172564_155172629_155172737_155172893_155173316
transcript_148277.known	chr3	-	6913	36	FSM	ENSG00000004399.13	ENST00000324093.9	6913	36	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_16	8.3950422687368	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGGCTCCAGCCTTTGT	-129604616	True	NA	-27	True	AATAAA	-20	NA	129606676	129555213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_129556429_129556616_129556692_129557082_129557224_129558427_129558576_129559619_129559784_129560329_129560435_129560688_129560724_129561645_129561710_129561799_129561904_129562786_129562944_129563093_129563241_129565339_129565539_129565886_129566018_129566526_129566632_129567491_129567605_129567697_129567806_129569842_129569958_129570785_129570936_129571039_129571304_129571508_129571600_129571676_129571845_129572608_129572749_129572841_129572942_129573593_129573746_129574335_129574491_129575468_129575563_129575765_129575856_129578328_129578434_129583566_129583670_129584124_129584234_129584384_129584563_129585951_129586082_129586171_129586273_129586587_129586720_129589350_129589528_129605328
transcript_148284.known	chr3	-	6303	7	FSM	ENSG00000172765.18	ENST00000393238.8	6303	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	14.7356333046425	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGGTCAGACTCATGT	-129893538	True	NA	-12	True	AATAAA	-16	NA	129893711	129647791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_129651796_129654967_129655104_129670329_129671265_129827802_129828509_129832773_129832827_129880308_129880560_129893493
transcript_148287.nic	chr3	-	3368	6	NIC	ENSG00000172765.18	novel	6303	7	NA	NA	-73	-2722	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	17.3020230031057	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGATATTTAAGTGTG	NA	False	NA	-13	True	AATAAA	-26	NA	129893784	129650548	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_129651796_129654967_129655104_129670329_129671265_129827802_129828509_129832773_129832827_129893493
transcript_14829.known	chr1	-	578	4	FSM	ENSG00000163463.13	ENST00000471891.5	578	4	0	0	0	0	multi-exon	FALSE	canonical	3	1334	junction_3	191.217735114247	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGAGTTGTGATAT	-155156766	True	NA	-16	True	AATAAA	-14	NA	155173251	155169408	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155169561_155169790_155169858_155172564_155172893_155173220
transcript_148290.known	chr3	-	5631	4	FSM	ENSG00000172765.18	ENST00000432054.6	5631	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	18.6726180988812	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGGTCAGACTCATGT	NA	False	NA	-12	True	AATAAA	-16	NA	129688732	129647791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_129651796_129654967_129655104_129670329_129671265_129688176
transcript_148292.known	chr3	+	3556	3	FSM	ENSG00000271270.8	ENST00000605830.6	3556	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	4.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGCAAAAGTTCTACTTT	129893800	False	NA	NA	False	AATAAA	-19	NA	129893810	129908911	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_129893928_129901706_129901861_129905626
transcript_148294.known	chr3	+	1466	2	FSM	ENSG00000249846.7	ENST00000658712.1	1466	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCCTGGTATATAGTAAG	130112356	True	NA	13	True	AATACA	-16	NA	130112524	130120566	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_130112745_130119320
transcript_148297.known	chr3	-	5016	20	FSM	ENSG00000196455.8	ENST00000356763.8	5016	20	0	0	0	0	multi-exon	TRUE	canonical	3	195	junction_16	29.3595534622273	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGCATCCTAAGAGTTT	-130739048	True	NA	-12	True	ATTAAA	-28	NA	130746829	130678933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_130679486_130680612_130680722_130680976_130681066_130681490_130681592_130684249_130684382_130686210_130686423_130690489_130690655_130703722_130703889_130705560_130705772_130706947_130707136_130708290_130708493_130716395_130716600_130718388_130718535_130723413_130723588_130728462_130728685_130730307_130730443_130733547_130734131_130735868_130736003_130744485_130745265_130746317
transcript_148302.nic	chr3	-	3689	9	ISM	ENSG00000196455.8	ENST00000356763.8	5016	20	-10	36672	-10	811	5prime_fragment	FALSE	canonical	3	195	junction_5	26.3079717006082	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCATCAAAAAGTGGGCAA	-130739058	True	NA	NA	False	AAGAAA	-7	NA	130746839	130715605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_130716600_130718388_130718535_130723413_130723588_130728462_130728685_130730307_130730443_130733547_130734131_130735868_130736003_130744485_130745265_130746317
transcript_148307.nic	chr3	+	3745	29	NIC	ENSG00000017260.20	novel	3386	28	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_28	117.704446537477	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTTACTGTTCTCTTT	130892888	True	NA	9	True	ATTAAA	-6	NA	130894029	131016684	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_130894338_130894589_130894776_130930415_130930527_130932021_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131001219_131001315_131016151
transcript_148309.nic	chr3	+	3850	29	NIC	ENSG00000017260.20	novel	3690	28	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_28	115.194705403769	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTTACTGTTCTCTTT	NA	False	NA	9	True	ATTAAA	-6	NA	130893954	131016684	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_130894338_130894589_130894776_130930415_130930527_130932021_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131001219_131001345_131016151
transcript_14831.known	chr1	-	785	4	FSM	ENSG00000163463.13	ENST00000487350.5	785	4	0	0	0	0	multi-exon	FALSE	canonical	3	1721	junction_1	53.1057644914582	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGAGTTGTGATATG	-155156753	True	NA	-15	True	AATAAA	-15	NA	155173238	155169407	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155169561_155169790_155169858_155172564_155172629_155172737
transcript_148315.known	chr3	+	3439	28	FSM	ENSG00000017260.20	ENST00000513801.5	3439	28	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_27	122.529960502934	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCAAGCTGTGGTGCATT	130894093	True	NA	37	True	ATTAAA	-34	NA	130894177	131016712	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_130894338_130930415_130930527_130932021_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131001219_131001315_131016151
transcript_148317.nic	chr3	+	3365	28	NIC	ENSG00000017260.20	novel	3439	28	NA	NA	-44	-292	combination_of_known_junctions	FALSE	canonical	3	71	junction_27	120.012219313854	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGTAACAGCTTTTCAT	NA	False	NA	7	True	AATAAA	-30	NA	130893946	131016377	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_130894338_130930415_130930527_130932021_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131001219_131001345_131016151
transcript_148319.known	chr3	+	4994	28	FSM	ENSG00000017260.20	ENST00000510168.6	4994	28	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_1	83.2847430355439	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATCCCAGTGGGGACTA	130892942	False	NA	17	True	AATAAA	-19	NA	130894083	131003150	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_130894338_130894589_130894776_130930415_130930527_130932021_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131001219
transcript_14832.known	chr1	-	3145	23	FSM	ENSG00000169231.13	ENST00000368378.7	3145	23	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	3.40181040764866	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTGCAACTGCTTATTT	-155207753	True	NA	0	True	CATAAA	-19	NA	155207897	155195587	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155195900_155195986_155196127_155197040_155197214_155197462_155197660_155197879_155197929_155198041_155198221_155198408_155198603_155199803_155199857_155199994_155200114_155200450_155200611_155200896_155201005_155201093_155201205_155201416_155201570_155201956_155202035_155202260_155202402_155202811_155202961_155203085_155203138_155203222_155203306_155203512_155203540_155204854_155204958_155205059_155205317_155206199_155206407_155207797
transcript_148321.known	chr3	+	3690	28	FSM	ENSG00000017260.20	ENST00000533801.6	3690	28	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_27	123.734826424225	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCCCAAGCTGTGGTGC	130892873	True	NA	34	True	ATTAAA	-31	NA	130894014	131016709	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_130894338_130894589_130894776_130930415_130930527_130932021_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131016151
transcript_148324.known	chr3	+	4969	28	FSM	ENSG00000017260.20	ENST00000508532.5	4969	28	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	100.670032374989	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATCCCAGTGGGGACTA	130893854	False	NA	17	True	AATAAA	-19	NA	130893990	131003150	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_130894338_130894707_130894776_130930415_130930527_130932021_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131001219
transcript_148329.known	chr3	+	4714	27	FSM	ENSG00000017260.20	ENST00000504948.5	4714	27	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	88.0419144397988	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATCCCAGTGGGGACTA	130894093	True	NA	17	True	AATAAA	-19	NA	130894177	131003150	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_130894338_130930415_130930527_130932021_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131001219
transcript_148358.known	chr3	+	2926	18	FSM	ENSG00000114670.14	ENST00000383366.9	2926	18	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	2.65814671239882	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAAACTTTCTTATTGAA	131026644	True	NA	NA	False	AATAAA	-24	NA	131026876	131350465	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_131027007_131027929_131028003_131029612_131029879_131080422_131080589_131109802_131109922_131132744_131132810_131133829_131133957_131152387_131152538_131152630_131152710_131155035_131155122_131162407_131162528_131165425_131165520_131168829_131168938_131170772_131170888_131228527_131228689_131243435_131243497_131273477_131273575_131349556
transcript_148364.known	chr3	-	2669	7	FSM	ENSG00000034533.12	ENST00000507978.5	2669	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	23.2050042495627	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGCTTTTTCTTTAGGAC	-131026572	False	NA	NA	False	AATATA	-40	NA	131026854	131013981	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_131014388_131016143_131016340_131016989_131017050_131018505_131018717_131024004_131025332_131025473_131025595_131026506
transcript_148366.known	chr3	-	2687	6	FSM	ENSG00000034533.12	ENST00000264992.8	2687	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	13.6616250863505	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTGTATTTCTAAATAT	-131026543	True	NA	-5	True	AATAAA	-19	NA	131026825	131013874	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_131014388_131016143_131016340_131018505_131018717_131024004_131025332_131025473_131025595_131026506
transcript_148371.known	chr3	+	2208	3	FSM	ENSG00000246082.3	ENST00000499077.3	2243	3	35	0	-32	0	multi-exon	FALSE	canonical	3	95	junction_1	19.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGGACCATATAGTAGT	131360949	True	NA	2	True	AATAAA	-16	NA	131361897	131365122	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_131362069_131362171_131362442_131363355
transcript_148372.known	chr3	+	1706	2	FSM	ENSG00000246082.3	ENST00000498923.3	1773	2	67	0	-18	0	multi-exon	FALSE	canonical	3	134	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGCTTTCAAATATGTAT	131360963	True	NA	31	True	AATAAA	-28	NA	131361911	131364531	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_131362442_131363355
transcript_148376.known	chr3	+	6108	3	FSM	ENSG00000198585.12	ENST00000521288.2	6108	3	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	17	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCCAGGTTCTCACTTAT	131380092	True	NA	38	True	AATAAA	-40	NA	131381773	131388830	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_131381943_131382045_131382316_131383161
transcript_148378.known	chr3	+	1552	2	FSM	ENSG00000198585.12	ENST00000502852.1	1552	2	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATACATGATACCAGATGA	131380103	True	NA	-10	True	NA	NA	NA	131381784	131383439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_131381943_131382045
transcript_148379.known	chr3	-	3473	1	FSM	ENSG00000261167.1	ENST00000565095.1	3473	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTCAATCTTGCCTAAAG	-131458556	False	NA	53	True	AATACA	-17	NA	131458598	131455125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_131455100_131458600
transcript_148381.known	chr3	-	1708	10	FSM	ENSG00000114686.9	ENST00000264995.8	1708	10	0	0	0	0	multi-exon	FALSE	canonical	3	1126	junction_6	101.852592589899	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCTGTTTACATTTTTGT	-131476434	True	NA	-18	True	AATAAA	-14	NA	131502971	131462211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_131462876_131468090_131468169_131469695_131469774_131471170_131471280_131487679_131487741_131489980_131490081_131498178_131498278_131500429_131500522_131501530_131501716_131502729
transcript_148382.known	chr3	-	1377	10	FSM	ENSG00000114686.9	ENST00000511168.5	1377	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_9	422.012140718227	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTTATCTTAAGATGTCT	-131476446	True	NA	-66	True	NA	NA	NA	131502983	131462435	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_131462876_131468090_131468169_131469695_131469774_131471170_131471280_131487679_131487741_131489980_131490081_131498178_131498278_131500429_131500522_131501530_131501716_131502848
transcript_148397.known	chr3	-	532	5	FSM	ENSG00000114686.9	ENST00000510154.1	532	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	673.101961072764	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAGGAAAACTGTAATGGA	-131476400	True	NA	NA	False	AATATA	-4	NA	131502937	131498246	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_131498278_131500429_131500522_131501530_131501716_131501843_131501925_131502794
transcript_148398.known	chr3	-	813	4	FSM	ENSG00000114686.9	ENST00000510923.5	813	4	0	0	0	0	multi-exon	FALSE	canonical	3	1344	junction_1	34.1857670188438	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTATCTGGAACAAGTAAT	-131476430	True	NA	NA	False	NA	NA	NA	131502967	131497979	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_131498278_131500429_131500522_131501530_131501716_131502729
transcript_148399.known	chr3	+	3174	10	FSM	ENSG00000014257.16	ENST00000336375.10	3174	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	3.0951973949298	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCCTTTGTGTTTGGGGT	132317341	True	NA	NA	False	AATAAA	-24	NA	132317406	132358841	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_132317577_132328266_132328363_132331646_132331734_132332191_132332345_132337455_132337555_132342551_132342645_132344926_132345060_132349919_132350003_132352719_132352824_132356685
transcript_148404.known	chr3	+	7754	56	FSM	ENSG00000138246.17	ENST00000260818.11	7754	56	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_4	19.695399471211	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTGTTCTAGTTTAAT	132416272	True	NA	30	True	AATAAA	-27	NA	132417501	132539032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_132417761_132434537_132434619_132446474_132446551_132447320_132447471_132447897_132447940_132450646_132450848_132453297_132453505_132453598_132453695_132454065_132454158_132456234_132456402_132456500_132456581_132456662_132456833_132457268_132457369_132460249_132460358_132461049_132461206_132462466_132462524_132463695_132463818_132465994_132466071_132466298_132466395_132467169_132467314_132473144_132473228_132474931_132475086_132477788_132477893_132477980_132478141_132479226_132479290_132480368_132480471_132482225_132482331_132483374_132483578_132484587_132484673_132488297_132488453_132488975_132489022_132490896_132491052_132492413_132492616_132494143_132494260_132495087_132495167_132496527_132496664_132499125_132499311_132499733_132499809_132500793_132500914_132502288_132502469_132503213_132503382_132505301_132505416_132507236_132507354_132511066_132511245_132513007_132513100_132514570_132514671_132516421_132516497_132516703_132516817_132522827_132522998_132523156_132523200_132523539_132523714_132525609_132525790_132526140_132526282_132528188_132528333_132530997_132531098_132538175
transcript_148413.known	chr3	-	3231	20	FSM	ENSG00000240303.8	ENST00000264990.11	3231	20	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_14	33.8830480008552	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTTGTAATTTGTTTCT	-132659113	True	NA	-9	True	ATTAAA	-19	NA	132659809	132558140	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_132559086_132559832_132559943_132561100_132561218_132575771_132575927_132576943_132577016_132578795_132578882_132579491_132579559_132603228_132603328_132605097_132605206_132618633_132618773_132619467_132619546_132626690_132626818_132628339_132628447_132630436_132630559_132631340_132631480_132639491_132639657_132641971_132642134_132642676_132642803_132644796_132644897_132659602
transcript_148420.known	chr3	-	3684	19	FSM	ENSG00000240303.8	ENST00000496418.5	3684	19	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_13	34.4093010681705	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTAATTTGTTTCTCTG	-132659611	False	NA	-6	True	ATTAAA	-22	NA	132659649	132558137	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_132559086_132559832_132559943_132561100_132561218_132575771_132575927_132576943_132577016_132578795_132579559_132603228_132603328_132605097_132605206_132618633_132618773_132619467_132619546_132626690_132626818_132628339_132628447_132630436_132630559_132631340_132631480_132639491_132639657_132641971_132642134_132642676_132642803_132644796_132644897_132659602
transcript_148422.nnic	chr3	-	2196	13	NNC	ENSG00000240303.8	novel	3231	20	NA	NA	-80	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_12	45.8374998106233	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTTGTAATTTGTTTCT	-132626464	True	NA	-9	True	ATTAAA	-19	NA	132627154	132558140	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_132559086_132559832_132559943_132561100_132561218_132575771_132575927_132576943_132577016_132578795_132578882_132579491_132579559_132603228_132603328_132605097_132605206_132618633_132618773_132619467_132619546_132626690_132626818_132627061
transcript_148431.known	chr3	+	4692	12	FSM	ENSG00000081307.15	ENST00000356232.10	4692	12	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_3	25.9420842558417	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTCTGGTATATTTGT	132654310	True	NA	20	True	ACTAAA	-38	NA	132660328	132679794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_132660699_132665822_132665869_132665983_132666074_132668817_132668928_132670197_132670285_132670964_132671050_132671776_132671882_132672049_132672178_132675247_132675384_132675604_132675681_132675816_132675924_132676442
transcript_148438.known	chr3	+	2997	12	FSM	ENSG00000081307.15	ENST00000494238.6	2997	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	137.369983608845	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCAACTACCAAATGTTT	132654343	True	NA	12	True	AATAAA	-24	NA	132660361	132677782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_132661049_132665822_132665869_132665983_132666074_132668817_132668928_132670197_132670285_132670964_132671050_132671776_132671882_132672049_132672178_132675247_132675384_132675604_132675681_132675816_132675924_132676442
transcript_148446.known	chr3	+	3727	6	FSM	ENSG00000144868.14	ENST00000321871.11	3727	6	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	29.2779780722645	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTGCTAATACATTTT	133036711	True	NA	NA	False	AATAAA	-22	NA	133038390	133397775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_133038436_133045901_133046021_133229265_133229352_133379751_133381162_133390179_133390335_133395863
transcript_148447.known	chr3	+	2165	6	FSM	ENSG00000144868.14	ENST00000393130.7	2165	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	35.5494022453262	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTCTCTTAATAACTATT	133036722	True	NA	NA	False	AATAAA	-31	NA	133038401	133396228	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_133038436_133045901_133046021_133229269_133229352_133379751_133381162_133390179_133390335_133395863
transcript_148450.known	chr3	+	955	5	FSM	ENSG00000091527.17	ENST00000431519.6	955	5	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_4	149.456306323955	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGGCAGTGATTCACCAC	133572318	False	NA	87	True	NA	NA	NA	133573975	133587418	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_133574285_133575038_133575116_133584001_133584151_133586562_133586723_133587158
transcript_148451.known	chr3	+	3351	5	FSM	ENSG00000091527.17	ENST00000264993.8	3351	5	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_4	121.526746027366	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGACTGTAATGGTTAT	133565203	True	NA	14	True	AATAAA	-16	NA	133573685	133590261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_133574285_133575038_133575116_133584001_133584151_133586562_133586723_133587895
transcript_148453.known	chr3	+	563	5	FSM	ENSG00000091527.17	ENST00000503932.6	598	5	35	0	35	0	multi-exon	FALSE	canonical	1	12	junction_1	217.583891867022	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCTTAAACTTCAGCTAGA	133574000	False	NA	NA	False	AATAGA	-28	NA	133574079	133587971	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_133574181_133575038_133575116_133584001_133584151_133586562_133586723_133587895
transcript_148458.known	chr3	+	3621	5	FSM	ENSG00000091527.17	ENST00000420115.6	3621	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	251.25584570314	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGGACTGTAATGGTTA	133574370	True	NA	13	True	AATAAA	-15	NA	133574456	133590260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_133574593_133575038_133575116_133584001_133584151_133586562_133586723_133587161
transcript_148459.known	chr3	-	6152	28	FSM	ENSG00000163781.14	ENST00000642236.1	6152	28	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_21	40.2485419650886	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCGAAACTCCATCTCAAAA	NA	False	NA	NA	False	NA	NA	NA	133662380	133600270	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_133601394_133608534_133608697_133608872_133608963_133611003_133611142_133612388_133612553_133616813_133616926_133617159_133617327_133618212_133618434_133620154_133620348_133623090_133623194_133623310_133623458_133624051_133624176_133628361_133628472_133628559_133628734_133637875_133638163_133639958_133640171_133643199_133643373_133644019_133644364_133649382_133649634_133649779_133649944_133652462_133652615_133653344_133653525_133655289_133655487_133656675_133656858_133657797_133657942_133659015_133659151_133661043_133661135_133661768
transcript_148462.known	chr3	-	5761	28	FSM	ENSG00000163781.14	ENST00000260810.10	5761	28	0	0	0	0	multi-exon	TRUE	canonical	3	128	junction_21	30.1506960430317	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGCAGGCCAGGCACGG	-133657498	True	NA	NA	False	NA	NA	NA	133661941	133600237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_133601394_133608534_133608697_133608872_133608963_133611003_133611142_133612388_133612553_133616813_133616926_133617159_133617327_133618212_133618434_133620154_133620348_133623090_133623194_133623310_133623458_133624051_133624176_133628361_133628472_133628559_133628734_133637875_133638163_133639958_133640171_133643199_133643373_133644019_133644364_133649382_133649634_133649779_133649944_133652462_133652630_133653344_133653525_133655289_133655487_133656675_133656858_133657797_133657942_133659015_133659151_133661043_133661135_133661768
transcript_148468.known	chr3	-	5219	9	FSM	ENSG00000154917.11	ENST00000543906.5	5219	9	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	7.9912061042123	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAAAGCTTCTTGTCTG	-133895580	False	NA	NA	False	AATAAA	-15	NA	133895595	133824242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_133827346_133827427_133828853_133834574_133834642_133838165_133838260_133839505_133839618_133841284_133841391_133841609_133841664_133864583_133864643_133895396
transcript_148469.nic	chr3	+	1972	8	NIC	ENSG00000144867.13	novel	2837	8	NA	NA	-11	676	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	115.487608664748	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCACTGAGACCCAGTG	133799194	True	NA	NA	False	AATAAA	-15	NA	133805803	133826448	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_133806003_133806608_133806704_133807745_133807824_133811116_133811200_133815589_133815727_133816877_133816933_133819552_133819821_133825391
transcript_148471.known	chr3	-	5596	8	FSM	ENSG00000154917.11	ENST00000285208.9	5596	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	3.84919816723071	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTTGTCTGTGTTTAAG	-133895867	False	NA	NA	False	AATAAA	-23	NA	133895882	133824234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_133828853_133834574_133834642_133838165_133838260_133839505_133839618_133841284_133841391_133841609_133841664_133864583_133864643_133895396
transcript_148475.known	chr3	+	2576	7	FSM	ENSG00000144867.13	ENST00000678299.1	2576	7	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_4	16.4054530229704	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCCCTCTCAGCCTCTT	133799205	True	NA	10	True	AATAAA	-32	NA	133805814	133821492	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_133806003_133806608_133806704_133807745_133807824_133811116_133811200_133815589_133815727_133816877_133816933_133819552
transcript_148484.known	chr3	-	1918	13	FSM	ENSG00000174640.15	ENST00000493729.5	1918	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	3.87567198474449	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAGAAAGAAAACCCCA	-134029900	False	NA	NA	False	NA	NA	NA	134029914	133934610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_133934831_133935773_133935898_133938428_133938494_133942604_133942769_133945094_133945261_133947255_133947446_133948535_133948701_133948892_133948972_133951207_133951345_133953662_133953762_133973662_133973826_133979480_133979619_134029706
transcript_148487.nnic	chr3	-	2979	16	NNC	ENSG00000163785.13	novel	3049	15	NA	NA	-43	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	104.002350400791	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACAGTATTGAAATTATT	NA	False	NA	-12	True	ATTAAA	-17	NA	134250902	134157133	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_134158265_134159236_134159374_134175608_134175769_134175929_134176040_134177940_134178074_134183001_134183072_134188836_134188924_134191848_134191975_134195081_134195183_134202729_134202875_134207471_134207526_134209694_134209830_134211507_134211608_134222417_134222540_134250422_134250574_134250685
transcript_148489.nnic	chr3	-	2988	16	NNC	ENSG00000163785.13	novel	2942	15	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	133.766861865461	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACAGTATTGAAATTATT	NA	False	NA	-12	True	ATTAAA	-17	NA	134250902	134157133	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_134158265_134159236_134159374_134175608_134175769_134175929_134176040_134177940_134178074_134183001_134183072_134188836_134188924_134191848_134191984_134195081_134195183_134202729_134202875_134207471_134207526_134209694_134209830_134211507_134211608_134222417_134222540_134250422_134250574_134250685
transcript_148492.nnic	chr3	-	2544	16	NNC	ENSG00000163785.13	novel	2942	15	NA	NA	-43	-444	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	133.766861865461	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAAAAATACTTATT	NA	False	NA	NA	False	AAGAAA	-30	NA	134250902	134157577	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_134158265_134159236_134159374_134175608_134175769_134175929_134176040_134177940_134178074_134183001_134183072_134188836_134188924_134191848_134191984_134195081_134195183_134202729_134202875_134207471_134207526_134209694_134209830_134211507_134211608_134222417_134222540_134250422_134250574_134250685
transcript_148503.known	chr3	-	2653	10	FSM	ENSG00000114019.15	ENST00000513145.1	2653	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	86.9645876559697	206	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGACCCCAGGGGAGAGGA	-134368122	True	NA	NA	False	NA	NA	NA	134374445	134357550	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_134357764_134358539_134358717_134359282_134359504_134360105_134360408_134361511_134361808_134365816_134365910_134366282_134366428_134367496_134367804_134370699_134371495_134374341
transcript_148517.known	chr3	+	2182	13	FSM	ENSG00000182923.20	ENST00000684217.1	2182	13	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_9	50.035751107472	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTCTCATACGAATAT	134485482	False	NA	5	True	AATAAA	-14	NA	134485753	134561767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_134486053_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134547334_134547473_134549061_134549177_134550062_134550261_134551925_134552013_134561376
transcript_14852.known	chr1	+	1085	8	FSM	ENSG00000173171.15	ENST00000609421.1	1085	8	0	0	0	0	multi-exon	FALSE	canonical	3	824	junction_3	31.0240196608751	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCTCAAACATTTTCTCC	155202246	True	NA	NA	False	AATAAA	-16	NA	155209246	155213824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155209333_155210345_155210416_155210547_155210628_155212126_155212220_155212384_155212568_155212693_155212771_155213236_155213392_155213483
transcript_148520.known	chr3	+	5293	13	FSM	ENSG00000182923.20	ENST00000383229.8	5293	13	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	52.1229849064264	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGTTAGTGTCTTAACA	134485288	True	NA	NA	False	ATTAAA	-17	NA	134486056	134565031	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_134486203_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134547334_134547473_134549061_134549177_134550062_134550261_134551925_134552013_134561376
transcript_148522.known	chr3	+	5045	12	FSM	ENSG00000182923.20	ENST00000682593.1	5045	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	54.2951834157392	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTAAATCTGAGTTAGT	134485732	False	NA	NA	False	ATTAAA	-8	NA	134486003	134565022	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_134486053_134495295_134495361_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134561376
transcript_148525.known	chr3	+	5164	12	FSM	ENSG00000182923.20	ENST00000683245.1	5164	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	59.5346971545943	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTAAATCTGAGTTAGT	134485288	True	NA	NA	False	ATTAAA	-8	NA	134486056	134565022	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_134486203_134495295_134495365_134507108_134507287_134531844_134531941_134532759_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134561376
transcript_148526.known	chr3	+	5095	12	FSM	ENSG00000182923.20	ENST00000684492.1	5095	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	60.7517642501362	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTAAATCTGAGTTAGT	134486412	False	NA	NA	False	ATTAAA	-8	NA	134486457	134565022	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_134486557_134495295_134495361_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134561376
transcript_148529.nic	chr3	+	1107	7	ISM	ENSG00000182923.20	ENST00000683940.1	2005	13	12	15747	-10	15	5prime_fragment	FALSE	canonical	3	63	junction_1	38.265519727295	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAGGGAATCTGAAAAACT	134485461	True	NA	NA	False	AAAAAG	-9	NA	134485732	134545792	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_134486053_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585
transcript_148530.known	chr3	+	7253	12	FSM	ENSG00000182923.20	ENST00000682042.1	7253	12	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	39.7797656110002	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCATGGATGAACCTTGA	134485276	True	NA	NA	False	AAAAAG	-31	NA	134486044	134567117	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_134486203_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134561376
transcript_148534.known	chr3	+	1132	7	FSM	ENSG00000182923.20	ENST00000504013.6	1132	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	72.1266247650616	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTGTATATATATATATA	134486164	False	NA	NA	False	AAGAAA	-8	NA	134486220	134538527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_134486557_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134538311
transcript_148535.known	chr3	+	3753	13	FSM	ENSG00000288700.2	ENST00000683452.1	3753	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	67.7316498314406	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCATGACTGATGATTGA	134485449	True	NA	NA	False	NA	NA	NA	134485720	134629751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_134486053_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134615183_134615439_134627939
transcript_148539.known	chr3	-	1840	3	FSM	ENSG00000129055.13	ENST00000510994.5	1840	3	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_2	200.5	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGGGTCTTTTTGTTT	-134486006	False	NA	-2	True	ACTAAA	-19	NA	134486023	134477705	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_134478716_134482805_134482932_134485319
transcript_14854.known	chr1	+	2579	7	FSM	ENSG00000173171.15	ENST00000481771.5	2579	7	0	0	0	0	multi-exon	FALSE	canonical	3	856	junction_1	25.1241362482817	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCTCAAACATTTTCTC	155202250	True	NA	NA	False	AATAAA	-15	NA	155209250	155213823	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155209333_155210345_155210416_155210547_155212220_155212384_155212568_155212693_155212771_155213236_155213392_155213483
transcript_148540.known	chr3	-	1420	3	FSM	ENSG00000129055.13	ENST00000514612.5	1420	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	259.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTATGCTGGGTCTTTT	-134483649	True	NA	-7	True	ACTAAA	-14	NA	134485989	134477710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_134478716_134482805_134482932_134485700
transcript_148541.known	chr3	-	1170	3	FSM	ENSG00000129055.13	ENST00000354910.10	1170	3	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_2	118	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGGGTCTTTTTGTTT	-134483645	True	NA	-2	True	ACTAAA	-19	NA	134485985	134477705	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_134478716_134482805_134482932_134485951
transcript_148542.known	chr3	+	4674	16	FSM	ENSG00000154928.19	ENST00000398015.8	4674	16	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	4.22479453806796	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCAGAGTGTGTATCC	134794423	True	NA	31	True	ATTAAA	-33	NA	134795259	135260467	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_134795690_134925815_134925881_134951370_134952053_135106447_135106604_135132713_135133050_135154151_135154277_135162017_135162181_135165967_135166077_135166941_135167007_135179859_135179983_135192575_135192824_135201473_135201690_135241147_135241298_135248315_135248510_135249335_135249492_135259011
transcript_148547.known	chr3	+	3912	16	FSM	ENSG00000154928.19	ENST00000647596.1	3912	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	6.64797379323622	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTTTCTTTTGTTTGCA	134794455	True	NA	NA	False	NA	NA	NA	134795291	135259754	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_134795690_134925815_134925881_134951370_134952053_135106447_135106604_135132713_135133050_135154151_135154277_135162017_135162181_135165967_135166077_135166941_135167007_135179859_135179983_135192575_135192824_135201473_135201690_135241147_135241298_135248315_135248510_135249335_135249492_135259028
transcript_148550.known	chr3	-	1868	4	FSM	ENSG00000240086.7	ENST00000466206.6	1868	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	11.3137084989848	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATATAAGTCTCTGTG	-135439180	True	NA	-9	True	AATAAA	-14	NA	135439864	135354795	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_135356322_135379261_135379428_135379780_135379848_135439755
transcript_148552.known	chr3	-	1704	3	FSM	ENSG00000240086.7	ENST00000473001.2	1704	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGTGCTTAGCACCATGC	NA	False	NA	NA	False	AGTAAA	-15	NA	135439888	135377923	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_135379428_135379780_135379848_135439755
transcript_148554.known	chr3	+	6743	14	FSM	ENSG00000073711.11	ENST00000264977.8	6743	14	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	8.24190476060238	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGTTCATTAAGGTAATT	135964251	True	NA	10	True	AATAAA	-16	NA	135965727	136147894	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_135965850_136001058_136003494_136026831_136027099_136040858_136040963_136049258_136049362_136070477_136070553_136078366_136078454_136082264_136082422_136087882_136087932_136090577_136090668_136102006_136102183_136103257_136103377_136106215_136106323_136145042
transcript_148556.known	chr3	+	1782	13	FSM	ENSG00000073711.11	ENST00000490467.5	1782	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	19.7905701450632	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTACCATCGCCTTCC	135964267	True	NA	NA	False	NA	NA	NA	135965743	136145384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_135965850_136026831_136027099_136040858_136040963_136049258_136049362_136070477_136070553_136078366_136078454_136082264_136082422_136087882_136087932_136090577_136090668_136102006_136102183_136103257_136103377_136106215_136106323_136145042
transcript_148559.nic	chr3	+	1289	2	ISM	ENSG00000073711.11	ENST00000264977.8	6743	14	-69	145738	-69	-85730	5prime_fragment	FALSE	canonical	3	48	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATAATTTTTCTTCTGGG	135964182	True	NA	NA	False	CATAAA	-2	NA	135965658	136002156	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_135965850_136001058
transcript_148560.nic	chr3	+	1402	2	ISM	ENSG00000073711.11	ENST00000264977.8	6743	14	-69	145625	-69	-85617	5prime_fragment	FALSE	canonical	3	48	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGGAGTAGCATCAGTGA	135964182	True	NA	NA	False	CATAAA	-20	NA	135965658	136002269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_135965850_136001058
transcript_148561.known	chr3	-	5186	2	FSM	ENSG00000174579.4	ENST00000309993.3	5186	2	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTGTAGAATACTGAAGAG	-136196303	False	NA	-26	True	AATAAA	-20	NA	136196335	136148916	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_136152739_136194971
transcript_148564.known	chr3	-	6062	34	FSM	ENSG00000118007.13	ENST00000383202.7	6062	34	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_21	11.8496085648639	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGTGGTAGTCATCCTA	-136749069	True	NA	-2	True	AATAAA	-14	NA	136752378	136336235	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_136338278_136338369_136338451_136340490_136340606_136341440_136341552_136343831_136344007_136349157_136349364_136357719_136357849_136359147_136359297_136363365_136363468_136366942_136367083_136369107_136369283_136377659_136377753_136398748_136398830_136417884_136417973_136421092_136421164_136422409_136422614_136422767_136422858_136422951_136423045_136433555_136433660_136443286_136443405_136452032_136452148_136464880_136464989_136472412_136472493_136473538_136473638_136477288_136477413_136500222_136500297_136502627_136502780_136521212_136521418_136542118_136542196_136568764_136568862_136604308_136604474_136623145_136623249_136630869_136630982_136752194
transcript_148567.known	chr3	-	5951	33	FSM	ENSG00000118007.13	ENST00000236698.9	5951	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	19.311185230327	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGTGGTAGTCATCCTA	-136749069	True	NA	-2	True	AATAAA	-14	NA	136752378	136336235	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_136338278_136338369_136338451_136340490_136340606_136343831_136344007_136349157_136349364_136357719_136357849_136359147_136359297_136363365_136363468_136366942_136367083_136369107_136369283_136377659_136377753_136398748_136398830_136417884_136417973_136421092_136421164_136422409_136422614_136422767_136422858_136422951_136423045_136433555_136433660_136443286_136443405_136452032_136452148_136464880_136464989_136472412_136472493_136473538_136473638_136477288_136477413_136500222_136500297_136502627_136502780_136521212_136521418_136542118_136542196_136568764_136568862_136604308_136604474_136623145_136623249_136630869_136630982_136752194
transcript_148569.known	chr3	+	1844	16	FSM	ENSG00000114054.14	ENST00000466072.5	1844	16	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_10	214.675217221012	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCCTTACTGTAA	136247673	True	NA	17	True	ATTAAA	-14	NA	136250354	136330169	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_136250559_136255855_136255976_136256554_136256624_136260478_136260536_136261951_136262066_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326325_136326386_136326802_136326911_136327154_136327256_136327633_136327733_136328757_136328858_136329904
transcript_148570.known	chr3	+	6090	16	FSM	ENSG00000114054.14	ENST00000471595.5	6090	16	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_15	163.983657722347	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAATGTTGAGTTTTCAT	136247676	True	NA	NA	False	AATAAA	-22	NA	136250357	136337895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_136250559_136255855_136255976_136256554_136256624_136260478_136260536_136261951_136262066_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326802_136326911_136327154_136327256_136327633_136327733_136328757_136328858_136329904_136329985_136333401
transcript_148574.known	chr3	+	1799	15	FSM	ENSG00000114054.14	ENST00000251654.9	1799	15	0	0	0	0	multi-exon	FALSE	canonical	3	524	junction_3	65.7951365983839	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCCTTACTGTAA	136247658	True	NA	17	True	ATTAAA	-14	NA	136250339	136330169	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_136250559_136255855_136255976_136256554_136256624_136260478_136260536_136261951_136262066_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326802_136326911_136327154_136327256_136327633_136327733_136328757_136328858_136329904
transcript_148577.known	chr3	+	1683	14	FSM	ENSG00000114054.14	ENST00000484181.5	1683	14	0	0	0	0	multi-exon	FALSE	canonical	2	66	junction_11	154.128625297492	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCCTTACTGTAA	136247673	True	NA	17	True	ATTAAA	-14	NA	136250354	136330169	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_136250559_136255855_136255976_136256554_136256624_136260478_136260536_136261951_136262066_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326802_136326911_136327633_136327733_136328757_136328858_136329904
transcript_14858.known	chr1	-	2387	12	FSM	ENSG00000177628.16	ENST00000327247.9	2387	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	21.5061013829614	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGTGAGTGGCTTTAT	-155244656	False	NA	NA	False	NA	NA	NA	155244670	155234451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155235101_155235194_155235312_155235680_155235845_155236244_155236470_155237340_155237579_155238133_155238307_155238516_155238651_155239615_155239763_155239885_155240078_155240629_155240718_155241085_155241181_155244505
transcript_148580.known	chr3	+	1727	14	FSM	ENSG00000114054.14	ENST00000483687.5	1727	14	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	178.749667935306	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCCTTACTGTAA	136247673	True	NA	17	True	ATTAAA	-14	NA	136250354	136330169	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_136250559_136255855_136255976_136256554_136256624_136261951_136262066_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326802_136326911_136327154_136327256_136327633_136327733_136328757_136328858_136329904
transcript_148581.known	chr3	+	1715	14	FSM	ENSG00000114054.14	ENST00000462637.5	1715	14	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_2	175.435451471862	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCCTTACTGTAA	136247673	True	NA	17	True	ATTAAA	-14	NA	136250354	136330169	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_136250559_136255855_136255976_136260478_136260536_136261951_136262066_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326802_136326911_136327154_136327256_136327633_136327733_136328757_136328858_136329904
transcript_148583.known	chr3	+	1613	13	FSM	ENSG00000114054.14	ENST00000490504.5	1613	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	184.996771743605	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCCTTACTGTAA	136247673	True	NA	17	True	ATTAAA	-14	NA	136250354	136330169	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_136250559_136255855_136255976_136256554_136256624_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326802_136326911_136327154_136327256_136327633_136327733_136328757_136328858_136329904
transcript_14859.known	chr1	-	2291	11	FSM	ENSG00000177628.16	ENST00000368373.8	2291	11	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_7	9.84936546179499	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGTGAGTGGCTTTAT	-155241177	False	NA	NA	False	NA	NA	NA	155241249	155234451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155235101_155235194_155235312_155235680_155235845_155236244_155236470_155237340_155237579_155238133_155238307_155238516_155238651_155239615_155239763_155239885_155240078_155240629_155240718_155241085
transcript_148598.known	chr3	+	1937	4	FSM	ENSG00000158092.7	ENST00000288986.6	1937	4	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	18.4451137763426	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTCTCCCTCATCTGGT	136859839	True	NA	7	True	AATAAA	-21	NA	136862207	136949126	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_136862320_136927983_136928228_136945582_136946296_136948258
transcript_148601.known	chr3	+	4451	4	FSM	ENSG00000158092.7	ENST00000481752.6	4451	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	54.0637483799347	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACGAATCTCTGAAACGT	136859839	True	NA	NA	False	AATAAA	-24	NA	136862207	136951606	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_136862354_136927983_136928228_136945582_136946296_136948258
transcript_148608.known	chr3	-	827	4	FSM	ENSG00000239213.7	ENST00000474250.5	827	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	46.7332857821917	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTTTTTACCTTTTTTTC	-136860053	True	NA	-135	True	GATAAA	-5	NA	136862049	136842190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_136842570_136846527_136846587_136858517_136858604_136861746
transcript_148613.known	chr3	-	2304	3	FSM	ENSG00000239213.7	ENST00000666310.1	2304	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	52.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACCGTCCCTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	136862272	136841024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_136842570_136846527_136846587_136861572
transcript_148614.known	chr3	-	1943	3	FSM	ENSG00000239213.7	ENST00000470236.2	1943	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	55.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCATGGTGGTTCATGCC	-136860058	True	NA	NA	False	AATACA	-32	NA	136862054	136841125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_136842570_136846527_136846587_136861614
transcript_148615.known	chr3	-	1818	3	FSM	ENSG00000239213.7	ENST00000461864.7	1860	3	42	0	-4	0	multi-exon	FALSE	canonical	3	90	junction_2	14	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCAGCACTTTGGGAGGC	-136860041	True	NA	NA	False	NA	NA	NA	136862037	136841101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_136842570_136846527_136846587_136861746
transcript_148619.known	chr3	+	1577	2	FSM	ENSG00000168917.9	ENST00000393079.3	1577	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCTGGTATCTTTATTG	136818773	True	NA	11	True	ATTAAA	-17	NA	136819083	136855888	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_136819215_136854442
transcript_148621.known	chr3	+	1949	2	FSM	ENSG00000168917.9	ENST00000446465.3	1949	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCTGGTATCTTTATTG	136818815	True	NA	11	True	ATTAAA	-17	NA	136819125	136855888	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_136819629_136854442
transcript_148622.known	chr3	+	794	2	FSM	ENSG00000158092.7	ENST00000478862.1	794	2	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTCTCCAAAGTTTTT	136859898	True	NA	NA	False	NA	NA	NA	136862266	136928724	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_136862320_136927983
transcript_148624.known	chr3	+	577	2	FSM	ENSG00000158092.7	ENST00000460960.1	577	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCTTCTAGCAGGGGCT	136859898	True	NA	NA	False	NA	NA	NA	136862266	136928473	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_136862354_136927983
transcript_148625.known	chr3	+	2020	1	FSM	ENSG00000168875.3	ENST00000306087.3	2020	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACCTTTGATGTGCCTAA	137764273	True	NA	NA	False	AATAAA	-23	NA	137764314	137766334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_137764300_137766300
transcript_148627.known	chr3	-	3492	16	FSM	ENSG00000158163.15	ENST00000327532.7	3492	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_15	6.35819680936873	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGTATGTATTTCATTA	-138114894	True	NA	-5	True	AATATA	-39	NA	138115608	138061989	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_138062978_138064627_138064768_138067530_138067701_138068150_138068368_138071642_138071836_138077498_138077633_138080566_138080621_138081733_138081765_138084112_138084254_138086960_138087024_138088378_138088508_138092382_138092545_138094861_138094984_138097762_138097848_138103470_138104053_138115327
transcript_148632.known	chr3	-	2662	8	FSM	ENSG00000138231.13	ENST00000260803.9	2662	8	0	0	0	0	multi-exon	TRUE	canonical	3	65	junction_2	13.6217113612117	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTGAGATTAGTATAACC	-138173646	True	NA	63	True	AATAAA	-42	NA	138174921	138160987	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_138162583_138163348_138163495_138163777_138163859_138167080_138167306_138170106_138170193_138171632_138171714_138173501_138173627_138174598
transcript_148641.known	chr3	+	3043	23	FSM	ENSG00000114098.18	ENST00000481646.5	3043	23	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	94.3357376870435	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAAAAAGAAAAAGTT	NA	False	NA	40	True	TATAAA	-6	NA	138187266	138296549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_138187600_138188454_138188531_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
transcript_148644.nic	chr3	+	3057	23	NIC	ENSG00000114098.18	novel	3043	23	NA	NA	-2	0	intron_retention	FALSE	canonical	3	64	junction_1	97.5364309983753	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAAAAAG	138186290	True	NA	32	True	AATATA	-41	NA	138187298	138296541	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_138187600_138188400_138188531_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
transcript_148653.known	chr3	+	2777	22	FSM	ENSG00000114098.18	ENST00000491704.5	2777	22	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	103.268248100564	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACAGTTTGAATGAAATG	138186292	True	NA	93	True	TATAAA	-17	NA	138187300	138296394	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_138187600_138188454_138188531_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
transcript_148658.nic	chr3	+	2980	22	NIC	ENSG00000114098.18	novel	2777	22	NA	NA	-2	0	intron_retention	FALSE	canonical	3	38	junction_2	106.224786257349	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAAAAAG	138186290	True	NA	32	True	AATATA	-41	NA	138187298	138296541	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_138187600_138188400_138188531_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
transcript_148659.known	chr3	+	4757	22	FSM	ENSG00000114098.18	ENST00000469044.6	4757	22	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	88.0365055181933	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCAACTTCTAAAAAGGAG	138186292	True	NA	2	True	AATAAA	-16	NA	138187300	138298373	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_138187600_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
transcript_148665.nic	chr3	+	2870	21	NIC	ENSG00000114098.18	novel	4757	22	NA	NA	12	0	intron_retention	FALSE	canonical	3	53	junction_1	98.1908727937582	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAAAAAG	NA	False	NA	32	True	AATATA	-41	NA	138187278	138296541	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_138187600_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
transcript_148669.known	chr3	+	4728	21	FSM	ENSG00000114098.18	ENST00000538260.5	4728	21	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	95.0191954291342	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGAGTCTGTTTTCCA	NA	False	NA	13	True	AATAAA	-27	NA	138187247	138298384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_138187600_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
transcript_14867.known	chr1	-	3190	12	FSM	ENSG00000160767.22	ENST00000361361.7	3190	12	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_11	15.4041960581637	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCTGTCACCAGTGAAAT	-155255473	False	NA	-16	True	AATAAA	-30	NA	155255483	155247204	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155247956_155248049_155248304_155248404_155248474_155250275_155250822_155251094_155251165_155251501_155251602_155251732_155251906_155253624_155253733_155253858_155253979_155254083_155254195_155254399_155254457_155254652
transcript_148674.known	chr3	+	1920	20	FSM	ENSG00000114098.18	ENST00000485396.5	1920	20	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	103.155075149436	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAGGAAGTACAGGAACC	138183908	True	NA	NA	False	NA	NA	NA	138187527	138295933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_138187600_138221925_138221998_138223388_138223532_138223635_138223734_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
transcript_148677.known	chr3	+	2910	13	FSM	ENSG00000114098.18	ENST00000471453.5	2910	13	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	98.0228148046271	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAGAAAAAGTTATAA	138183909	True	NA	NA	False	NA	NA	NA	138187528	138246857	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_138187600_138188454_138188531_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087
transcript_148680.known	chr3	+	3181	13	FSM	ENSG00000114098.18	ENST00000358441.6	3181	13	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	105.208523102139	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTTTTGTGTGGTAAAG	138186333	True	NA	NA	False	AATAAA	-24	NA	138187341	138246887	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_138187600_138188400_138188531_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087
transcript_148690.known	chr3	+	1656	12	FSM	ENSG00000114098.18	ENST00000470821.5	1656	12	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	71.5059958186482	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATGTTTAGTGAGTG	138183911	True	NA	7	True	AATAAA	-17	NA	138187530	138245681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_138187600_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087
transcript_148693.known	chr3	+	1714	11	FSM	ENSG00000114098.18	ENST00000489213.5	1714	11	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	100.371559716884	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTACTGTGCAAGTTTAA	138187326	True	NA	24	True	NA	NA	NA	138187349	138245635	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_138187600_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087
transcript_148707.known	chr3	+	4538	6	FSM	ENSG00000158186.13	ENST00000289104.8	4538	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	15.0678465614699	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTCTTAGTTCCTTTT	NA	False	NA	14	True	AATAAA	-14	NA	138347696	138405533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_138348326_138372865_138373077_138397323_138397478_138398468_138398569_138400533_138400614_138402169
transcript_148708.known	chr3	+	4098	6	FSM	ENSG00000158186.13	ENST00000423968.7	4098	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	6.27375485654325	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTCTTAGTTCCTTTT	138348564	True	NA	14	True	AATAAA	-14	NA	138348578	138405533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_138348768_138372865_138373077_138397323_138397478_138398468_138398569_138400533_138400614_138402169
transcript_148716.known	chr3	+	394	2	FSM	ENSG00000158186.13	ENST00000477784.1	394	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAACAGCTTGCCCAAGAT	138348890	False	NA	NA	False	AAAAAG	-2	NA	138348906	138349951	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_138349033_138349683
transcript_148719.known	chr3	+	5915	23	FSM	ENSG00000158220.14	ENST00000389567.9	5915	23	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_16	4.44897611026988	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGTTAAGTTTTTCATGT	138434047	True	NA	NA	False	AGTAAA	-25	NA	138434615	138479925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_138435126_138452047_138452090_138455193_138455329_138457567_138457645_138459186_138459254_138459944_138460035_138460610_138460667_138462085_138462207_138464344_138464516_138465338_138465422_138467560_138467610_138468104_138468195_138468654_138468718_138468818_138468882_138469435_138469505_138470059_138470147_138470876_138471027_138472362_138472860_138473535_138473635_138474220_138474353_138476222_138476329_138476442_138476493_138476817
transcript_148723.known	chr3	+	4044	22	FSM	ENSG00000158220.14	ENST00000486831.5	4044	22	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_11	3.95209408023741	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTGGTTGGATTTTT	138434017	True	NA	NA	False	TTTAAA	-12	NA	138434585	138477060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_138435126_138452047_138452090_138455193_138455329_138457567_138457645_138459186_138459254_138459944_138460035_138460610_138460667_138462085_138462207_138464344_138464516_138465338_138465422_138467560_138467610_138468104_138468195_138468654_138468718_138468818_138468882_138469435_138469505_138470059_138471027_138472362_138473094_138473535_138473635_138474220_138474353_138476222_138476329_138476442_138476493_138476817
transcript_148726.known	chr3	+	2398	18	FSM	ENSG00000158220.14	ENST00000490835.5	2398	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	5.77070516161446	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCAGATATCAGCCTCAA	138434047	True	NA	NA	False	NA	NA	NA	138434615	138472833	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_138435126_138452047_138452090_138455193_138455329_138457567_138457645_138459186_138459254_138459944_138460035_138460610_138460667_138462085_138462207_138464344_138464516_138465338_138465422_138467560_138467610_138468104_138468195_138468654_138468718_138468818_138468886_138469435_138469505_138470059_138470147_138470876_138471027_138472362
transcript_148728.known	chr3	-	2028	18	FSM	ENSG00000114107.9	ENST00000474781.5	2028	18	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_16	52.9494111242826	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATCAAATCATTTTTAC	-138594325	False	NA	-15	True	ATTAAA	-19	NA	138594339	138495012	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_138495077_138498030_138498111_138500109_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138572858_138572915_138591853_138591957_138594197
transcript_148730.known	chr3	-	1993	18	FSM	ENSG00000114107.9	ENST00000484888.5	1993	18	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_16	35.3152877685148	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTTTACTGTGTAAATT	-138589477	True	NA	-5	True	ATTAAA	-29	NA	138594224	138495002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_138495077_138498030_138498111_138500109_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138572858_138572985_138591853_138591957_138594197
transcript_148739.nic	chr3	-	2593	17	NIC	ENSG00000114107.9	novel	2636	18	NA	NA	28	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_15	51.5657574728618	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAAGTGTCCTCAGTGATG	-138594277	False	NA	-3	True	AATAAA	-23	NA	138594291	138494343	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_138495077_138498030_138498111_138500109_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138591853_138591957_138594197
transcript_148743.known	chr3	-	2037	16	FSM	ENSG00000114107.9	ENST00000481834.5	2037	16	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_14	38.1587327998309	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACCTTCCCTGTTTGGAA	-138589501	True	NA	1	True	ATTAAA	-16	NA	138594248	138499883	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138572858_138572933_138591853_138591957_138594197
transcript_148745.known	chr3	-	1811	14	FSM	ENSG00000114107.9	ENST00000489254.5	1811	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	63.5302658152491	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTTTTAGAGTGGAGTT	-138594305	False	NA	NA	False	NA	NA	NA	138594319	138494757	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_138495077_138498030_138498111_138500109_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138591853_138591957_138594197
transcript_148756.known	chr3	+	1622	6	FSM	ENSG00000158234.13	ENST00000338446.8	1622	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	57.8390871297257	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTTGATTTGTGTTTAT	138608449	True	NA	NA	False	AATAAA	-15	NA	138608608	138633376	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_138608938_138610603_138611038_138621406_138621540_138622187_138622417_138629106_138629157_138632929
transcript_148757.known	chr3	+	946	5	FSM	ENSG00000158234.13	ENST00000393035.6	946	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	7.69740215917033	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTTGATTTGTGTTTAT	138608750	False	NA	NA	False	AATAAA	-15	NA	138608850	138633376	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_138608938_138621406_138621540_138622187_138622417_138629106_138629157_138632929
transcript_148758.known	chr3	+	927	5	FSM	ENSG00000158234.13	ENST00000393034.6	927	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	44.0511066830335	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATCTGCTTGATTTG	138608911	True	NA	NA	False	AATAAA	-8	NA	138609071	138633369	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_138609147_138621406_138621540_138622187_138622417_138629106_138629157_138632929
transcript_148767.known	chr3	-	6259	24	FSM	ENSG00000051382.9	ENST00000674063.1	6259	24	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_22	29.4654967876868	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTTGTGCTATCAAATA	-138829747	True	NA	NA	False	ATTAAA	-17	NA	138834928	138652697	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_138655527_138656141_138656275_138657689_138657836_138663905_138664030_138665035_138665204_138681966_138682046_138683677_138683788_138684624_138684804_138688874_138688975_138690999_138691144_138694785_138694908_138698906_138699096_138704442_138704494_138707158_138707290_138712207_138712305_138714467_138714720_138733360_138733439_138734633_138734805_138737706_138737887_138742557_138742782_138755753_138755980_138759172_138759360_138796462_138796568_138834694
transcript_148769.known	chr3	-	4658	23	FSM	ENSG00000051382.9	ENST00000477593.5	4658	23	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_22	50.0030784176301	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAGCCTCTTCTTTATGG	-138829571	False	NA	-2	True	AATAAA	-33	NA	138834752	138654017	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_138655527_138656141_138656275_138657689_138657836_138663905_138664030_138665035_138665204_138681966_138682046_138683677_138683788_138684624_138684804_138688874_138688975_138690999_138691144_138694785_138694908_138698906_138699096_138704442_138704494_138707158_138707290_138712207_138712305_138714467_138714720_138733360_138733439_138734633_138734805_138737706_138737887_138742557_138742782_138755753_138755980_138759172_138759360_138834694
transcript_148782.known	chr3	-	4747	23	FSM	ENSG00000051382.9	ENST00000462898.5	4747	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	68.4317238307372	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTCTCAGTCAAATAAATG	-138829736	True	NA	2	True	ATTAAA	-29	NA	138834917	138654067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_138655527_138656141_138656275_138657689_138657836_138663905_138664030_138665035_138665204_138681966_138682046_138683677_138683788_138684624_138684804_138688874_138688975_138690999_138691144_138694785_138694908_138698906_138699096_138704442_138704494_138707158_138707290_138712207_138712305_138714467_138714720_138733360_138733439_138734633_138734805_138737706_138737887_138742557_138742756_138755753_138755980_138759172_138759360_138834694
transcript_148783.known	chr3	+	974	3	FSM	ENSG00000206262.9	ENST00000470680.5	974	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGGTGCAGAAGGACCAATG	138947074	True	NA	NA	False	NA	NA	NA	138947233	138950879	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_138947465_138949511_138949640_138950264
transcript_148784.known	chr3	+	4094	3	FSM	ENSG00000206262.9	ENST00000383165.4	4094	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTCTTTTTGTGAAGGGT	138947057	True	NA	13	True	AATAAA	-22	NA	138947216	138953990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_138947465_138949519_138949640_138950264
transcript_148786.known	chr3	+	1205	8	FSM	ENSG00000175110.14	ENST00000680020.1	1205	8	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_1	58.8800232919209	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAGCAAAAATTATTACCC	139338027	True	NA	24	True	ATTAAA	-26	NA	139344019	139357129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_139344199_139346877_139347045_139348159_139348325_139350178_139350323_139350976_139351061_139352646_139352793_139355681_139355791_139356918
transcript_14879.known	chr1	-	2379	9	FSM	ENSG00000160767.22	ENST00000350210.6	2379	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_8	37.300929948193	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCTGTCACCAGTGAAAT	-155254950	False	NA	-16	True	AATAAA	-30	NA	155254960	155247204	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155247956_155248049_155248304_155248404_155248474_155250275_155250822_155251094_155251165_155251501_155251602_155251732_155251906_155253624_155253733_155254652
transcript_148790.known	chr3	+	1065	8	FSM	ENSG00000175110.14	ENST00000478464.6	4352	8	0	3287	0	-32	multi-exon	TRUE	canonical	3	18	junction_1	192.143441316159	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATTTTAAAAATACATT	139344350	True	NA	-91	True	NA	NA	NA	139344564	139357014	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_139344719_139346877_139347045_139348159_139348325_139350178_139350323_139350976_139351061_139352646_139352793_139355681_139355791_139356918
transcript_148795.known	chr3	+	1547	10	FSM	ENSG00000175110.14	ENST00000495075.5	1547	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	228.806781389618	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGACTACATTTCTCTGT	NA	False	NA	-59	True	AATACA	-15	NA	139005805	139357046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_139006096_139180289_139180361_139343955_139344199_139346877_139347045_139348159_139348325_139350178_139350323_139350976_139351061_139352646_139352793_139355681_139355791_139356918
transcript_148796.known	chr3	+	600	4	FSM	ENSG00000175110.14	ENST00000465373.5	600	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	242.822752000073	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTCCCAAAAGAAGGTCG	139338046	False	NA	NA	False	NA	NA	NA	139344038	139350259	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_139344199_139346850_139347045_139348159_139348325_139350178
transcript_148799.known	chr3	-	3495	23	FSM	ENSG00000184432.11	ENST00000514508.2	3495	23	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_22	227.002603108823	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTTTCTTGACCTCATT	-139378136	True	NA	22	True	NA	NA	NA	139389670	139357405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_139357959_139358199_139358272_139358743_139358813_139358997_139359179_139359269_139359363_139361080_139361296_139362406_139362518_139366567_139366776_139367014_139367146_139368144_139368289_139369260_139369368_139369455_139369545_139371722_139371834_139373212_139373413_139373665_139373809_139374488_139374589_139375467_139375615_139378040_139378190_139379046_139379174_139379379_139379467_139383297_139383436_139385003_139385201_139389547
transcript_148804.nic	chr3	-	3179	22	NIC	ENSG00000184432.11	novel	3489	23	NA	NA	0	47	combination_of_known_junctions	FALSE	canonical	3	31	junction_21	190.299382225176	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGTACTTGTTTCCTTT	-139378123	True	NA	31	True	CATAAA	-15	NA	139389657	139357590	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_139357959_139358199_139358272_139358743_139358813_139358997_139359179_139359269_139359363_139361080_139361296_139362406_139362518_139366567_139366776_139367014_139367146_139368144_139368289_139369260_139369368_139369455_139369545_139371722_139371834_139373212_139373413_139373665_139373809_139374488_139374589_139375467_139375615_139378040_139378190_139379046_139379174_139379379_139379467_139383297_139383436_139389468
transcript_148805.known	chr3	-	3275	22	FSM	ENSG00000184432.11	ENST00000333188.10	3275	22	0	0	0	0	multi-exon	FALSE	canonical	3	780	junction_21	65.0856404252825	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTTTCTTGACCTCATT	-139378113	True	NA	22	True	NA	NA	NA	139389647	139357405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_139357959_139358199_139358272_139358743_139358813_139358997_139359179_139359269_139359363_139361080_139361296_139362406_139362518_139366567_139366776_139367014_139367146_139368144_139368289_139369260_139369368_139369455_139369545_139371722_139371834_139373212_139373413_139373665_139373809_139374488_139374589_139375467_139375615_139378040_139378190_139379046_139379174_139379379_139379467_139383297_139383436_139389547
transcript_148806.known	chr3	-	3221	22	FSM	ENSG00000184432.11	ENST00000507777.6	3221	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	196.555243427442	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTTTCTTGACCTCATT	-139378142	True	NA	22	True	NA	NA	NA	139389676	139357405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_139357959_139358199_139358272_139358743_139358813_139358997_139359179_139359269_139359363_139361080_139361296_139362406_139362518_139366567_139366776_139367014_139367146_139368144_139368289_139369260_139369368_139369455_139369545_139371722_139371834_139373212_139373413_139373665_139373809_139374488_139374589_139375467_139375615_139378040_139378190_139379046_139379174_139379379_139379467_139383297_139383436_139389630
transcript_148810.known	chr3	-	6602	21	FSM	ENSG00000184432.11	ENST00000677309.1	6602	21	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_14	199.041201764861	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGCGTTGCTCTAATT	-139378123	True	NA	0	True	AATAAA	-16	NA	139389657	139353945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_139357959_139358199_139358272_139358743_139358813_139358997_139359179_139359269_139359363_139361080_139361296_139362406_139362518_139366567_139366776_139367014_139367146_139368144_139368289_139369260_139369368_139369455_139369545_139371722_139371834_139373212_139373413_139374488_139374589_139375467_139375615_139378040_139378190_139379046_139379174_139379379_139379467_139383297_139383436_139389547
transcript_148814.known	chr3	-	3373	21	FSM	ENSG00000184432.11	ENST00000512309.2	3373	21	0	0	0	0	multi-exon	FALSE	canonical	3	780	junction_20	63.9660065972544	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTCATACTATTAGAC	NA	False	NA	-16	True	ACTAAA	-18	NA	139389736	139357637	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_139358272_139358743_139358813_139358997_139359179_139359269_139359363_139361080_139361296_139362406_139362518_139366567_139366776_139367014_139367146_139368144_139368289_139369260_139369368_139369455_139369545_139371722_139371834_139373212_139373413_139373665_139373809_139374488_139374589_139375467_139375615_139378040_139378190_139379046_139379174_139379379_139379467_139383297_139383436_139389547
transcript_148833.known	chr3	+	1201	4	FSM	ENSG00000248932.7	ENST00000653359.1	1201	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.5777619273972	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATAAGTGCTTTCTTTT	139388948	True	NA	NA	False	AATAAA	-18	NA	139389760	139445098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_139389934_139419556_139419681_139423015_139423115_139444293
transcript_148835.known	chr3	-	516	4	FSM	ENSG00000114115.10	ENST00000619087.4	516	4	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_3	8.65383665716478	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCCTCTTTGCACAGCAT	-139535358	True	NA	NA	False	NA	NA	NA	139539587	139517573	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_139517681_139518420_139518523_139538780_139538960_139539459
transcript_148839.known	chr3	-	2268	7	FSM	ENSG00000163864.17	ENST00000643695.2	2268	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5.18544972870135	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATGAAAAATTTCTCTTT	-139677585	True	NA	NA	False	AATAAA	-17	NA	139677972	139560190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_139561393_139573597_139573681_139578871_139579056_139582926_139583209_139627615_139627765_139637962_139638063_139677704
transcript_148841.known	chr3	-	2126	7	FSM	ENSG00000163864.17	ENST00000645290.1	2126	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.7404875511093	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGGATAAATAATAAATTGA	-139677630	True	NA	NA	False	NA	NA	NA	139678017	139560222	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_139561393_139572106_139572234_139573597_139573681_139578871_139579056_139627615_139627765_139637962_139638063_139677704
transcript_148843.known	chr3	-	1569	6	FSM	ENSG00000163864.17	ENST00000296202.11	1569	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	2.87054001888146	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGACAGGATGCTAATT	-139677559	True	NA	NA	False	NA	NA	NA	139677946	139560581	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_139561393_139573597_139573681_139578871_139579056_139627615_139627765_139637962_139638063_139677704
transcript_148844.nic	chr3	-	1912	5	NIC	ENSG00000163864.17	novel	2268	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_4	1.87082869338697	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATGAAAAATTTCTCTTT	-139677611	True	NA	NA	False	AATAAA	-17	NA	139677998	139560190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_139561393_139573597_139573681_139578871_139579056_139627615_139627765_139677704
transcript_148845.known	chr3	-	1863	5	FSM	ENSG00000163864.17	ENST00000339837.9	1863	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5.11737237261468	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATGAAAAATTTCTCTTT	-139677611	True	NA	NA	False	AATAAA	-17	NA	139677998	139560190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_139561393_139573597_139573681_139578871_139579056_139637962_139638063_139677704
transcript_148847.known	chr3	-	688	3	FSM	ENSG00000163864.17	ENST00000511003.1	688	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCATTCTGCCTGAAGCC	-139677617	True	NA	-5	True	AATAAA	-19	NA	139678004	139634359	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_139634648_139637962_139638063_139677704
transcript_148859.nic	chr3	+	1323	8	NIC	ENSG00000114120.14	novel	1163	8	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_4	94.8756436347182	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGACCAAAAGATTACAGT	140935155	True	NA	NA	False	NA	NA	NA	140941800	140976483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_140942096_140956526_140956692_140959462_140959541_140963126_140963228_140966933_140967037_140970926_140970994_140973715_140974006_140976259
transcript_148862.known	chr3	+	1163	8	FSM	ENSG00000114120.14	ENST00000502594.5	1163	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	98.6616564273051	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGACCAAAAGATTACAGT	140935249	True	NA	NA	False	NA	NA	NA	140941894	140976483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_140942096_140956526_140956692_140959462_140959541_140963126_140963228_140966999_140967037_140970926_140970994_140973715_140974006_140976259
transcript_148869.known	chr3	+	5697	7	FSM	ENSG00000114120.14	ENST00000324194.12	5697	7	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_4	59.5699868502028	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTGACTTGAGTGCTCT	140935190	True	NA	14	True	AATAAA	-28	NA	140941835	140980995	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_140942096_140956526_140956692_140959462_140959541_140963126_140963228_140970926_140970994_140973715_140974006_140976259
transcript_148875.known	chr3	+	1040	6	FSM	ENSG00000114120.14	ENST00000453248.6	1040	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	94.3673672410119	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAGACCAAAAGATTACA	140935255	True	NA	NA	False	NA	NA	NA	140941900	140976481	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_140942096_140956526_140956692_140963126_140963228_140970926_140970994_140973715_140974006_140976259
transcript_148882.known	chr3	+	3537	4	FSM	ENSG00000114120.14	ENST00000507429.5	3537	4	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	37.7123616632825	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATTGTCTTGCATTTATG	140935241	True	NA	NA	False	AATAAA	-22	NA	140941886	140966211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_140942096_140956526_140956692_140959462_140959541_140963126
transcript_148883.nic	chr3	+	555	3	ISM	ENSG00000114120.14	ENST00000507429.5	3537	4	-86	6654	-29	2488	5prime_fragment	FALSE	canonical	3	222	junction_1	40	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTAAAGCAAGTTATGG	140935155	True	NA	NA	False	NA	NA	NA	140941800	140959557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_140942096_140956526_140956692_140959462
transcript_148884.nic	chr3	+	2883	3	ISM	ENSG00000114120.14	ENST00000507429.5	3537	4	-86	4326	-29	-1586	5prime_fragment	FALSE	canonical	3	222	junction_1	40	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATACTGGATTTTTATCC	140935155	True	NA	NA	False	NA	NA	NA	140941800	140961885	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_140942096_140956526_140956692_140959462
transcript_14889.known	chr1	-	1499	5	FSM	ENSG00000160767.22	ENST00000487649.5	1499	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	58.7553189081635	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGACGTGTGCCTATGCAA	-155255181	False	NA	NA	False	NA	NA	NA	155255191	155247426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155247956_155248049_155248304_155248404_155248474_155253624_155253733_155254652
transcript_148893.nnic	chr3	+	2771	4	NNC	ENSG00000175093.5	novel	2963	3	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	61.369554521947	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCGTATTAAATGTTGTT	141050300	True	NA	21	True	AATAAA	-21	NA	141051380	141148611	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_141051481_141051638_141051993_141065951_141066799_141147141
transcript_148894.nnic	chr3	+	2419	3	NNC	ENSG00000175093.5	novel	1752	3	NA	NA	-603	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	66	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCGTATTAAATGTTGTT	141050681	True	NA	21	True	AATAAA	-21	NA	141050743	141148611	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_141050846_141065951_141066799_141147141
transcript_148896.known	chr3	+	2963	3	FSM	ENSG00000175093.5	ENST00000310546.3	2963	3	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	4	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCGTATTAAATGTTGTT	141050266	True	NA	21	True	AATAAA	-21	NA	141051346	141148611	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_141051993_141065951_141066799_141147141
transcript_148899.nnic	chr3	+	2142	2	NIC	ENSG00000175093.5	novel	2963	3	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCGTATTAAATGTTGTT	141050240	True	NA	21	True	AATAAA	-21	NA	141051320	141148611	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_141051993_141147141
transcript_148901.known	chr3	+	3160	8	FSM	ENSG00000155893.13	ENST00000393010.6	3160	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	71.0742641214678	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTAATGGTTTGTACCTA	141230089	True	NA	19	True	AATAAA	-25	NA	141231860	141294644	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_141231912_141234215_141234319_141234885_141234957_141260122_141260255_141278341_141278501_141279377_141279505_141287313_141287454_141292267
transcript_148904.known	chr3	+	2066	7	FSM	ENSG00000155893.13	ENST00000502783.5	2066	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	73.970151637896	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTTGAAGTGATTTATC	141230068	True	NA	NA	False	NA	NA	NA	141231839	141293605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_141231912_141260122_141260255_141262242_141262341_141278341_141278501_141279377_141279505_141287313_141287454_141292267
transcript_148907.known	chr3	+	3302	6	FSM	ENSG00000155893.13	ENST00000286353.9	3302	6	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_2	24.3146046646866	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATAGTATCTGTTGGTAA	141230053	True	NA	NA	False	AATAAA	-31	NA	141231824	141294924	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_141231912_141260122_141260255_141278341_141278501_141279377_141279505_141287313_141287454_141292267
transcript_148913.known	chr3	+	479	5	FSM	ENSG00000155893.13	ENST00000505502.1	479	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	11.9451873154003	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGCACCTGGTTTTGAT	141230110	True	NA	7	True	ATTAAA	-20	NA	141231881	141236389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_141231912_141234215_141234319_141234885_141234957_141235397_141235555_141236271
transcript_148916.known	chr3	+	644	3	FSM	ENSG00000177311.12	ENST00000510338.5	644	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAATGAAAAAAGGCA	141401878	True	NA	NA	False	NA	NA	NA	141402348	141442826	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_141402450_141403926_141404032_141442388
transcript_148919.known	chr3	+	5638	24	FSM	ENSG00000155903.14	ENST00000286364.9	5638	24	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_19	22.2259406676821	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTTGTGAGACTGTAT	141484610	True	NA	8	True	AATAAA	-17	NA	141487026	141615344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_141487217_141512162_141512281_141516327_141516432_141529707_141529803_141540532_141540610_141553856_141553941_141555839_141555913_141558885_141558963_141559893_141559996_141570911_141571069_141571405_141571555_141572608_141572724_141573146_141573222_141573943_141574068_141576999_141577107_141580367_141580452_141581099_141581178_141586024_141586099_141586645_141586753_141607677_141607761_141608488_141608698_141609419_141609524_141609876_141610067_141612282
transcript_148924.nic	chr3	+	2263	19	ISM	ENSG00000155903.14	ENST00000286364.9	5638	24	-65	28384	-65	6515	5prime_fragment	FALSE	canonical	3	103	junction_2	13.791323985896	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAATGGTGTTCCTTCAG	141484545	True	NA	1	True	ATTAAA	-14	NA	141486961	141586960	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_141487217_141512162_141512281_141516327_141516432_141529707_141529803_141540532_141540610_141553856_141553941_141555839_141555913_141558885_141558963_141559893_141559996_141570911_141571069_141571405_141571555_141572608_141572724_141573146_141573222_141573943_141574068_141576999_141577107_141580367_141580452_141581099_141581178_141586024_141586099_141586645
transcript_148927.known	chr3	+	862	4	FSM	ENSG00000114125.14	ENST00000477393.1	862	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	954.695064754535	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCGCGCACACAGCTTAGA	141725507	True	NA	16	True	ATTAAA	-28	NA	141738318	141745517	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_141738510_141742643_141742908_141743508_141743557_141745158
transcript_148928.known	chr3	+	2669	3	FSM	ENSG00000114125.14	ENST00000273480.4	2669	3	0	0	0	0	multi-exon	FALSE	canonical	3	1651	junction_1	216	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATGTATGTAATTGTT	141725486	True	NA	7	True	CATAAA	-21	NA	141738297	141747560	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_141738517_141743508_141743557_141745158
transcript_148929.known	chr3	+	782	2	FSM	ENSG00000114125.14	ENST00000480908.1	782	2	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTTACTCTTAATTTGT	141725465	True	NA	21	True	AATAAA	-17	NA	141738276	141745700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_141738517_141745158
transcript_148931.known	chr3	+	1847	7	FSM	ENSG00000069849.11	ENST00000286371.8	1847	7	0	0	0	0	multi-exon	FALSE	canonical	3	1662	junction_5	156.61488505957	258	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGTTTTGTGTAAGCAT	141863241	True	NA	39	True	TATAAA	-33	NA	141876642	141926549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_141876911_141903619_141903749_141907166_141907275_141913651_141913837_141915969_141916021_141921976_141922064_141925530
transcript_148933.known	chr3	-	1853	14	FSM	ENSG00000114126.18	ENST00000467072.5	1853	14	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_11	168.93186890389	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCATGTGTGTTTGTAGT	-142148126	True	NA	-12	True	AATAAA	-32	NA	142149532	141952480	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974195_141978519_141978683_141993537_141993586_141995019_141995142_142005440_142005545_142054114_142054150_142093060_142093128_142101734_142101842_142149182
transcript_148937.known	chr3	-	9880	13	FSM	ENSG00000114126.18	ENST00000489671.6	9880	13	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_10	143.25043629951	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAGTCTCATTACTAGTG	-142148138	False	NA	91	True	AATAAA	-14	NA	142149544	141944427	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974192_141978519_141978683_141993537_141993586_141995019_141995142_142005440_142005545_142093060_142093128_142101734_142101842_142149182
transcript_148947.known	chr3	-	2360	11	FSM	ENSG00000114126.18	ENST00000486111.5	2360	11	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_6	95.0789145920377	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTGTACATGTCACCT	-142024093	False	NA	-9	True	AAGAAA	-30	NA	142028665	141951501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974195_141978519_141978683_141993537_141993586_141995019_141995142_142005440_142005545_142028578
transcript_14895.nnic	chr1	-	1511	9	NNC	ENSG00000116521.11	novel	1545	9	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_5	190.311586615214	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCCCGTTTCCTGAATCT	-155262354	False	NA	-2	True	AATAAA	-23	NA	155262368	155255980	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_155256420_155256673_155256792_155257284_155257387_155257497_155257658_155258825_155258913_155260329_155260451_155260536_155260660_155261656_155261735_155262085
transcript_148953.known	chr3	-	1442	10	FSM	ENSG00000114126.18	ENST00000495310.5	1442	10	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_8	127.69755936065	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGAGGAGATAGTGGG	-142024074	True	NA	NA	False	AAGAAA	-6	NA	142028646	141952275	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974192_141978519_141978683_141993537_141993586_142005440_142005545_142028578
transcript_148956.nic	chr3	-	1189	9	NIC	ENSG00000114126.18	novel	1442	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_7	128.225813996246	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCATGTGTGTTTGTAGT	-142024074	True	NA	-12	True	AATAAA	-32	NA	142028646	141952480	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974192_141978519_141978683_142005440_142005545_142028578
transcript_148966.known	chr3	-	746	7	FSM	ENSG00000114126.18	ENST00000478006.5	746	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	145.617936166302	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGACAAGTGAGTGGAGAA	-142024059	True	NA	NA	False	AATACA	-34	NA	142028631	141963819	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_141963964_141970072_141970142_141974047_141974195_141978519_141978683_141993537_141993586_141995019_141995142_142028578
transcript_148971.known	chr3	-	4479	17	FSM	ENSG00000175066.16	ENST00000480757.5	4479	17	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_7	3.31603584872058	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAAGCTGCTCTGTTGTTTT	-142223830	True	NA	4	True	ATTAAA	-22	NA	142225548	142163908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_142165771_142170324_142170459_142171418_142171479_142172352_142172457_142177481_142177577_142181460_142181566_142182922_142183050_142184710_142185794_142185928_142185990_142186193_142186268_142186451_142186514_142187703_142187780_142198801_142198934_142204694_142204789_142213525_142213602_142215598_142215693_142225308
transcript_148972.known	chr3	-	9815	16	FSM	ENSG00000175066.16	ENST00000392993.7	9815	16	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	2.71947707391615	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCTGTTATTTGCTTTG	-142223867	True	NA	-2	True	ATTAAA	-18	NA	142225585	142157526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_142165771_142170324_142170459_142171418_142171479_142172352_142172457_142177481_142177577_142181460_142181566_142182922_142183050_142185928_142185990_142186193_142186268_142186451_142186514_142187703_142187780_142198801_142198934_142204694_142204789_142213525_142213602_142215598_142215693_142225308
transcript_14898.known	chr1	-	1545	9	FSM	ENSG00000116521.11	ENST00000302631.8	1545	9	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_7	62.0603285118601	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCCCGTTTCCTGAATCT	-155262346	False	NA	-2	True	AATAAA	-23	NA	155262360	155255980	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155256420_155256673_155256792_155257284_155257387_155257497_155257658_155258825_155258955_155260329_155260451_155260536_155260660_155261656_155261735_155262085
transcript_148984.nic	chr3	-	1259	10	ISM	ENSG00000114127.11	ENST00000463916.5	2075	12	-27	3182	0	1612	5prime_fragment	FALSE	canonical	3	20	junction_3	5.31245915016974	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAAAGGTGTCTATTTTTT	-142444888	True	NA	NA	False	AAGAAA	-3	NA	142448037	142421022	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_142421154_142421475_142421544_142422581_142422751_142422834_142422923_142423559_142423643_142425221_142425333_142425428_142425539_142426743_142426842_142432660_142432894_142447869
transcript_148986.known	chr3	-	8096	35	FSM	ENSG00000175054.16	ENST00000653868.1	8096	35	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_7	11.784542100818	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAAGTGACTGCTAATTG	-142576343	True	NA	NA	False	NA	NA	NA	142578733	142491142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_142493312_142496360_142496521_142497012_142497193_142498596_142498775_142499626_142499719_142503361_142503454_142505138_142505304_142507930_142508110_142512259_142512471_142513500_142513639_142515394_142515516_142519668_142519785_142522727_142522842_142523992_142524200_142535079_142535206_142536107_142536202_142538481_142538626_142540903_142541035_142542664_142542758_142547724_142547911_142549478_142549674_142550131_142550303_142553226_142553399_142553639_142553741_142553824_142554016_142555876_142556140_142556382_142556576_142558623_142558777_142559250_142559442_142560262_142560455_142561242_142561422_142562231_142563110_142566120_142566262_142568062_142568155_142578645
transcript_148987.nic	chr3	-	2484	10	ISM	ENSG00000175054.16	ENST00000653868.1	8096	35	-135	64755	-135	0	5prime_fragment	FALSE	canonical	3	33	junction_6	8.26565107262102	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTAGTCCAGTAAAACTT	-142576478	True	NA	NA	False	ACTAAA	-45	NA	142578868	142555897	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_142556140_142556382_142556576_142558623_142558777_142559250_142559442_142560262_142560455_142561242_142561422_142562231_142563110_142566120_142566262_142568062_142568155_142578645
transcript_148991.nic	chr3	+	3987	17	NIC	ENSG00000120756.13	novel	3700	16	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	138.069940949325	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTATATTTATTTCAT	142591780	True	NA	10	True	AATAAA	-20	NA	142596390	142713664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_142596510_142645295_142645581_142664201_142664308_142669389_142669554_142670992_142671123_142676156_142676290_142678031_142678114_142684005_142684172_142684252_142684396_142686283_142686377_142689617_142689814_142694468_142694548_142697952_142698068_142703867_142704002_142704462_142704587_142711500_142711626_142711871
transcript_148994.known	chr3	+	3700	16	FSM	ENSG00000120756.13	ENST00000457734.7	3700	16	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_14	56.9277905186327	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTATATTTATTTCAT	142591782	True	NA	10	True	AATAAA	-20	NA	142596392	142713664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_142596510_142664201_142664308_142669389_142669554_142670992_142671123_142676156_142676290_142678031_142678114_142684005_142684172_142684252_142684396_142686283_142686377_142689617_142689814_142694468_142694548_142697952_142698068_142703867_142704002_142704462_142704587_142711500_142711626_142711871
transcript_148999.nic	chr3	+	1701	12	ISM	ENSG00000120756.13	ENST00000457734.7	3700	16	-6	15426	-6	-200	5prime_fragment	FALSE	canonical	3	356	junction_11	43.2526691480393	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATCCCTCTAGTCAGACAC	142591776	True	NA	0	True	AATAAA	-15	NA	142596386	142698238	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_142596510_142664201_142664308_142669389_142669554_142670992_142671123_142676156_142676290_142678031_142678114_142684005_142684172_142684252_142684396_142686283_142686377_142689617_142689814_142694468_142694548_142697952
transcript_149004.known	chr3	+	4324	12	FSM	ENSG00000144935.16	ENST00000273482.10	4324	12	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_2	22.3950260121002	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTCTGTTCATTGTATT	142724156	False	NA	NA	False	AATAAA	-21	NA	142724168	142807888	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_142724732_142736378_142736534_142748257_142748461_142777631_142777764_142780833_142781030_142784703_142785041_142791018_142791159_142792823_142792968_142802168_142802345_142803976_142804179_142804435_142804631_142806007
transcript_149020.known	chr3	-	1896	9	FSM	ENSG00000163710.9	ENST00000295992.8	1896	9	0	0	0	0	multi-exon	TRUE	canonical	3	87	junction_6	12.3939249231226	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTACAGAACAACCACTAAAC	-142889026	False	NA	NA	False	AATAAA	-15	NA	142889083	142817873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_142818466_142820877_142821046_142823531_142823616_142829691_142829847_142838769_142838907_142842923_142843049_142848216_142848473_142887668_142887778_142888813
transcript_149022.known	chr3	-	704	4	FSM	ENSG00000163710.9	ENST00000495732.5	704	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	54.1007290975721	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTCGAGAAACCAGTGAG	-142889004	False	NA	-97	True	AAAAAG	-23	NA	142889061	142846651	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_142846743_142848216_142848473_142887668_142887778_142888813
transcript_149028.known	chr3	-	909	3	FSM	ENSG00000163710.9	ENST00000461818.5	909	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	61	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTCTTAAATAGCATGCT	-142888965	False	NA	NA	False	ACTAAA	-23	NA	142889022	142863888	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_142864480_142887668_142887778_142888813
transcript_149029.known	chr3	-	666	2	FSM	ENSG00000163710.9	ENST00000483454.1	666	2	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCCACTTAATGTTCC	-142888870	False	NA	NA	False	AATAAA	-1	NA	142888927	142887225	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_142887778_142888813
transcript_149031.known	chr3	+	3491	28	FSM	ENSG00000163714.18	ENST00000493598.6	3491	28	0	0	0	0	multi-exon	FALSE	canonical	3	393	junction_9	89.8067884920692	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTTTTTTGCCCCACC	142993509	True	NA	24	True	AATAAA	-21	NA	143001620	143056846	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841_143016976_143019968_143020037_143020598_143020694_143021349_143021383_143021472_143021556_143022496_143022663_143022852_143023065_143023974_143024019_143027148_143027254_143028339_143028411_143028486_143028647_143032783_143032947_143033270_143033351_143034887_143034976_143035981_143036105_143037178_143037336_143038107_143038204_143038893_143038961_143043116_143043277_143050938_143051050_143053675_143053795_143054942_143055120_143056311
transcript_149033.known	chr3	+	7424	28	FSM	ENSG00000163714.18	ENST00000473835.7	7424	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	162.439918195373	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTGGTTAGGAAAGTTC	142993458	True	NA	NA	False	TTTAAA	-31	NA	143001569	143060725	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841_143016976_143019968_143020037_143020598_143020694_143021349_143021386_143021472_143021556_143022496_143022663_143022852_143023065_143023974_143024019_143027148_143027254_143028339_143028407_143028482_143028647_143032783_143032947_143033270_143033351_143034887_143034976_143035981_143036105_143037178_143037336_143038107_143038204_143038893_143038961_143043116_143043277_143050938_143051050_143053675_143053795_143054942_143055120_143056311
transcript_149038.known	chr3	+	3557	27	FSM	ENSG00000163714.18	ENST00000488497.7	3557	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	206.882169962809	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAACGGTCTGTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	143001167	143056500	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841_143016976_143019968_143020037_143020598_143020694_143021349_143021386_143021472_143021556_143022496_143022663_143022852_143023065_143027148_143027254_143028339_143028407_143028482_143028647_143032783_143032947_143033270_143033351_143034887_143034976_143035981_143036105_143037178_143037336_143038107_143038204_143038893_143038961_143043116_143043277_143050938_143051050_143053675_143053795_143054942_143055120_143056311
transcript_14904.known	chr1	-	1537	8	FSM	ENSG00000116521.11	ENST00000355379.3	1537	8	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_7	191.11541549759	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCCCGTTTCCTGAATCT	-155262416	False	NA	-2	True	AATAAA	-23	NA	155262430	155255980	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155256420_155256673_155256792_155257284_155257387_155257497_155257658_155258825_155258955_155260329_155260451_155260536_155260660_155262085
transcript_149042.nic	chr3	+	2720	26	NIC	ENSG00000163714.18	novel	7424	28	NA	NA	-15	-73	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	165.866722400848	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGACAAGAAAGATAAAGAA	142993483	True	NA	-17	True	TATAAA	-44	NA	143001594	143053709	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841_143016976_143019968_143020037_143020598_143020694_143021349_143021383_143021472_143021556_143022496_143022663_143022852_143023065_143023974_143024019_143027148_143027254_143028339_143028407_143028482_143028647_143032783_143032947_143033270_143033351_143034887_143034976_143035981_143036105_143037178_143037336_143038107_143038204_143038893_143038961_143043116_143043277_143050938_143051050_143053675
transcript_149046.nic	chr3	+	2716	26	ISM	ENSG00000163714.18	ENST00000473835.7	7424	28	32	7016	-8	-73	5prime_fragment	FALSE	canonical	0	0	junction_15	168.49885934332	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGACAAGAAAGATAAAGAA	142993490	True	NA	-17	True	TATAAA	-44	NA	143001601	143053709	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841_143016976_143019968_143020037_143020598_143020694_143021349_143021386_143021472_143021556_143022496_143022663_143022852_143023065_143023974_143024019_143027148_143027254_143028339_143028407_143028482_143028647_143032783_143032947_143033270_143033351_143034887_143034976_143035981_143036105_143037178_143037336_143038107_143038204_143038893_143038961_143043116_143043277_143050938_143051050_143053675
transcript_149050.nic	chr3	+	2679	25	NIC	ENSG00000163714.18	novel	7424	28	NA	NA	-8	-2733	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	169.281565044422	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGGAATAAGTATACCCA	142993490	True	NA	NA	False	GATAAA	-13	NA	143001601	143051049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841_143016976_143019968_143020037_143020598_143020694_143021349_143021383_143021472_143021556_143022496_143022663_143022852_143023065_143023974_143024019_143027148_143027254_143028339_143028407_143028482_143028647_143032783_143032947_143033270_143033351_143034887_143034976_143035981_143036105_143037178_143037336_143038107_143038204_143038893_143038961_143043116_143043277_143050938
transcript_149057.nic	chr3	+	2475	23	Fusion	ENSG00000241570.8_ENSG00000163714.18	novel	7424	28	NA	NA	5	748	multi-exon	FALSE	canonical	0	0	junction_15	173.964373668246	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAAGTAAGAATCTAAGT	142993417	True	NA	1	True	AAGAAA	-2	NA	143001528	143038954	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841_143016976_143019968_143020037_143020598_143020694_143021349_143021383_143021472_143021556_143022496_143022663_143022852_143023065_143023974_143024019_143027148_143027254_143028339_143028407_143028482_143028647_143032783_143032947_143033270_143033351_143034887_143034976_143035981_143036105_143037178_143037336_143038107_143038204_143038893
transcript_149058.nic	chr3	+	2483	23	ISM	ENSG00000241570.8_ENSG00000163714.18	ENST00000473835.7	7424	28	-46	21771	0	748	5prime_fragment	FALSE	canonical	0	0	junction_15	176.754306059976	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAAGTAAGAATCTAAGT	142993412	True	NA	1	True	AAGAAA	-2	NA	143001523	143038954	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841_143016976_143019968_143020037_143020598_143020694_143021349_143021386_143021472_143021556_143022496_143022663_143022852_143023065_143023974_143024019_143027148_143027254_143028339_143028407_143028482_143028647_143032783_143032947_143033270_143033351_143034887_143034976_143035981_143036105_143037178_143037336_143038107_143038204_143038893
transcript_149068.known	chr3	+	588	6	FSM	ENSG00000163714.18	ENST00000493782.5	588	6	0	0	0	0	multi-exon	FALSE	canonical	3	710	junction_5	45.5833302864106	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAGATTTGCAGATCAAAA	142993412	True	NA	45	True	AAAAAG	-23	NA	143001523	143016888	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841
transcript_149075.known	chr3	+	280	3	FSM	ENSG00000241570.8	ENST00000608349.5	280	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCCCTTGAGCCTTAA	142964040	False	NA	NA	False	AATGAA	-28	NA	142964057	142964812	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_142964099_142964464_142964637_142964745
transcript_149077.known	chr3	+	438	3	FSM	ENSG00000241570.8	ENST00000607937.1	438	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGCCCTTGAGCCTT	142964073	True	NA	NA	False	AAGAAA	-45	NA	142964129	142964810	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_142964331_142964464_142964637_142964745
transcript_149079.known	chr3	-	561	1	FSM	ENSG00000268129.1	ENST00000597953.1	561	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGTTTTCATTTTTAAT	-143001166	True	NA	0	True	TTTAAA	-20	NA	143001467	143000906	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_143000900_143001500
transcript_149080.nnic	chr3	+	3584	3	NNC	ENSG00000175040.6	novel	4142	2	NA	NA	-719	-1044	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	50.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGCCTCCATTACTTTG	143119016	True	NA	19	True	AATAAA	-28	NA	143119051	143122970	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_143119840_143120072_143120542_143120643
transcript_149081.known	chr3	+	4142	2	FSM	ENSG00000175040.6	ENST00000309575.5	4142	2	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGTTTTATTTCACTGT	143118736	True	NA	NA	False	AGTAAA	-22	NA	143119770	143124014	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_143120542_143120643
transcript_149082.known	chr3	-	3564	16	FSM	ENSG00000181804.15	ENST00000316549.11	3564	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.28619042659763	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTGTTTGGCTAATGC	-143848370	True	NA	NA	False	AATAAA	-17	NA	143848468	143265221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_143266930_143268874_143268981_143363483_143363564_143382059_143382115_143467036_143467191_143493652_143493765_143495334_143495449_143552361_143552451_143574087_143574194_143578584_143578724_143652254_143652361_143693191_143693308_143795000_143795078_143796825_143796904_143832018_143832222_143848147
transcript_149084.known	chr3	-	712	2	FSM	ENSG00000181804.15	ENST00000498717.2	712	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTTTCTTTATGCAGTA	-143848371	True	NA	NA	False	AATAAA	-16	NA	143848469	143847593	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_143847984_143848147
transcript_149085.known	chr3	+	4330	3	FSM	ENSG00000181744.9	ENST00000315691.8	4330	3	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	3.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTCAGACTATTTCTTAA	143970377	True	NA	20	True	AATAAA	-20	NA	143971822	143992368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_143972990_143985542_143985847_143989509
transcript_149087.known	chr3	+	726	2	FSM	ENSG00000181744.9	ENST00000483808.1	726	2	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTGTGTAAAACAAAGCC	143972858	False	NA	NA	False	NA	NA	NA	143972876	143986155	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_143972990_143985542
transcript_149089.known	chr3	-	3749	20	FSM	ENSG00000152952.12	ENST00000282903.10	3749	20	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_6	71.4202187439199	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTGTTCTATTATTG	-146158975	True	NA	-4	True	AATAAA	-14	NA	146161184	146069439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_146070873_146071041_146071168_146071276_146071424_146072560_146072666_146073286_146073353_146076781_146076896_146077861_146077925_146079115_146079258_146081737_146081864_146085168_146085274_146086786_146086909_146088585_146088712_146091799_146091902_146102754_146102853_146104278_146104343_146106531_146106645_146110284_146110449_146121111_146121249_146124137_146124230_146160880
transcript_149093.known	chr3	-	3665	19	FSM	ENSG00000152952.12	ENST00000360060.7	3665	19	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_6	29.6045959061331	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTTTTGTTGTTCTATT	-146158958	True	NA	-8	True	AATAAA	-10	NA	146161167	146069443	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_146070873_146071041_146071168_146071276_146071424_146072560_146072666_146073286_146073353_146076781_146076896_146079115_146079258_146081737_146081864_146085168_146085274_146086786_146086909_146088585_146088712_146091799_146091902_146102754_146102853_146104278_146104343_146106531_146106645_146110284_146110449_146121111_146121249_146124137_146124230_146160880
transcript_149102.known	chr3	-	1375	11	FSM	ENSG00000114698.15	ENST00000493382.5	1375	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_8	5.98414572015087	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGCTTACAGTCAGCACT	-146250720	True	NA	NA	False	NA	NA	NA	146251143	146194356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_146194456_146195123_146195283_146196631_146196794_146199812_146200040_146201034_146201078_146206525_146206762_146220814_146220926_146222064_146222093_146223732_146223778_146250556_146250638_146250959
transcript_149104.known	chr3	-	1442	9	FSM	ENSG00000114698.15	ENST00000446574.6	1442	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	4.78114787472632	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGTTAACTTTGACAGCT	-146250444	False	NA	NA	False	NA	NA	NA	146250867	146194290	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_146194456_146195123_146195283_146196631_146196794_146199812_146200040_146201034_146201078_146206525_146206762_146220814_146220926_146222064_146222093_146250556
transcript_149105.known	chr3	-	3233	9	FSM	ENSG00000114698.15	ENST00000354952.7	3233	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	4.30116263352131	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTTATTTTTTGACT	-146250682	True	NA	NA	False	AATAAA	-23	NA	146251105	146192334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_146194456_146195123_146195283_146196631_146196794_146199812_146200040_146201034_146201078_146206525_146206762_146220814_146220926_146222064_146222093_146250959
transcript_149109.known	chr3	-	1976	9	FSM	ENSG00000188313.13	ENST00000342435.9	1976	9	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_3	9.84171605971235	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGATTTTTGTTTTTAA	-146539120	True	NA	-6	True	AATAAA	-18	NA	146544607	146515179	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_146516102_146517005_146517168_146521543_146521706_146521832_146522054_146525604_146525648_146528613_146528832_146533469_146533551_146536539_146536566_146544466
transcript_149114.known	chr3	-	996	8	FSM	ENSG00000188313.13	ENST00000448787.6	996	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	70.7519380278299	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTAGCTCTGGTTGTATA	-146539133	True	NA	-115	True	NA	NA	NA	146544620	146515954	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_146516102_146517005_146517168_146521543_146521706_146521832_146522054_146525604_146525648_146533469_146533551_146536539_146536566_146544466
transcript_149115.known	chr3	-	1443	8	FSM	ENSG00000188313.13	ENST00000487389.5	1443	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_7	67.8019324268588	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAACTTCCTTTGAAAA	-146539250	True	NA	23	True	AAAAAG	-25	NA	146544737	146515816	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_146516102_146517005_146517168_146521543_146521706_146521832_146522054_146525604_146525648_146528613_146528832_146533469_146533551_146544466
transcript_149117.known	chr3	-	701	6	FSM	ENSG00000188313.13	ENST00000463777.5	701	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	106.702577288461	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAACTGCTTTGAATTAT	-146544537	False	NA	-20	True	AAAAAG	-40	NA	146544555	146515801	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_146516102_146517005_146517168_146525604_146525648_146533469_146533551_146536539_146536566_146544466
transcript_149118.known	chr3	-	817	6	FSM	ENSG00000188313.13	ENST00000494568.5	817	6	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_3	7.24982758415674	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTTTGTAGATAGAAATC	-146544560	False	NA	-91	True	NA	NA	NA	146544578	146521716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_146522054_146525604_146525648_146528613_146528832_146533469_146533551_146536539_146536566_146544466
transcript_149122.known	chr3	-	1257	4	FSM	ENSG00000188313.13	ENST00000469266.1	1257	4	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	6.94422221866655	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATTTTGTTGCACTAAAT	-146539240	True	NA	-4	True	AATAAA	-15	NA	146544727	146527942	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_146528832_146533469_146533551_146536539_146536566_146544466
transcript_149126.known	chr3	+	5260	3	FSM	ENSG00000152977.10	ENST00000282928.5	5260	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCCTGTGCATTCTCTTT	147409111	True	NA	15	True	AATAAA	-19	NA	147409364	147416719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_147411095_147412517_147412682_147413353
transcript_149128.known	chr3	+	1044	3	FSM	ENSG00000152977.10	ENST00000474034.1	1044	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATAAAATCATTTAAATTA	147421233	False	NA	NA	False	NA	NA	NA	147421326	147510293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_147421560_147507940_147508053_147509594
transcript_149129.known	chr3	-	3550	3	FSM	ENSG00000174963.18	ENST00000472749.6	3550	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGGTGTCCTGTTATT	-147392381	False	NA	0	True	AATAAA	-28	NA	147392391	147386047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_147388860_147390930_147391247_147391969
transcript_149130.known	chr3	-	834	3	FSM	ENSG00000174963.18	ENST00000463850.5	834	3	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATAATATTTACGTCTAA	-147392420	False	NA	NA	False	NA	NA	NA	147392430	147388649	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_147388860_147390930_147391247_147392122
transcript_149135.known	chr3	+	2324	3	FSM	ENSG00000144891.19	ENST00000349243.8	2324	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTATCTTCATTACTT	148697867	True	NA	NA	False	AATAAA	-16	NA	148697902	148743003	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_148698128_148707943_148708028_148740988
transcript_149136.known	chr3	-	3633	26	FSM	ENSG00000071794.16	ENST00000494055.5	3633	26	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_1	104.227873431247	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTTCATGTTTGATGAT	-149075622	True	NA	NA	False	AAGAAA	-25	NA	149086554	149030994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_149031361_149032200_149032373_149034917_149034999_149039048_149039230_149039580_149039694_149040030_149040157_149041489_149041669_149042165_149042291_149046079_149046260_149048027_149048164_149048862_149049002_149050231_149050376_149055302_149055401_149059717_149059808_149060642_149060688_149060778_149060859_149063430_149063525_149064790_149064867_149068239_149068336_149071251_149071444_149071582_149071658_149073224_149073323_149074214_149074349_149075880_149076048_149084681_149084890_149086316
transcript_149137.known	chr3	-	5306	25	FSM	ENSG00000071794.16	ENST00000465259.5	5306	25	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_13	75.4027956857186	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTACCTTCCTCGGTGCCA	-149075590	True	NA	-23	True	AATAAA	-14	NA	149086522	149030126	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_149032373_149034917_149034999_149039048_149039230_149039580_149039694_149040030_149040157_149041489_149041669_149042165_149042291_149046079_149046260_149048027_149048164_149048862_149049002_149050231_149050376_149055302_149055401_149059717_149059805_149060642_149060688_149060778_149060859_149063430_149063525_149064790_149064867_149068239_149068336_149071251_149071444_149071582_149071658_149073224_149073323_149074214_149074349_149075880_149076048_149084681_149084890_149086316
transcript_14915.nnic	chr1	-	2302	14	NNC	ENSG00000176444.19	novel	2154	13	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_2	131.401052835929	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGGAGTTGGAGGTTTG	NA	False	NA	-7	True	AATAAA	-25	NA	155273516	155262867	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_155263401_155263572_155263709_155263949_155264041_155264220_155264301_155264467_155264551_155264644_155264775_155265859_155265955_155266728_155266896_155268009_155268127_155268292_155268360_155268707_155268796_155269487_155269717_155270807_155270978_155273200
transcript_149153.known	chr3	+	5996	8	FSM	ENSG00000163754.18	ENST00000345003.9	5996	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	134.154190910219	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGTATATATTGTTTACA	148988977	True	NA	NA	False	AATAAA	-16	NA	148991539	149031775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_148991648_148994141_148994278_148996301_148996477_148996741_148996905_149009275_149009403_149024052_149024273_149026451_149026503_149026759
transcript_149154.nic	chr3	-	2925	8	ISM	ENSG00000071794.16	ENST00000494055.5	3633	26	-7	35535	-7	-16260	5prime_fragment	FALSE	canonical	3	414	junction_1	25.0867881319134	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCACTCTTTCAAGTATG	-149075629	True	NA	NA	False	ATTAAA	-14	NA	149086561	149066529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_149068336_149071251_149071444_149071582_149071658_149073224_149073323_149074214_149074349_149075880_149076048_149084681_149084890_149086316
transcript_149156.known	chr3	+	1890	7	FSM	ENSG00000163754.18	ENST00000296048.10	1890	7	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_6	27.9026084005699	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGGTTGTTTAATTAAAT	148991432	False	NA	7	True	AATAAA	-16	NA	148991451	149027632	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_148991648_148994141_148994278_148996301_148996477_148996741_148996905_149009275_149009403_149024052_149024273_149026759
transcript_149160.known	chr3	+	1563	6	FSM	ENSG00000163754.18	ENST00000484197.5	1563	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	117.02888532324	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTGGTTGTTTAATTAAA	148988995	True	NA	6	True	AATAAA	-15	NA	148991557	149027631	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_148991648_148994141_148994278_148996301_148996477_148996741_148996905_149009275_149009403_149026759
transcript_149170.known	chr3	+	4611	17	FSM	ENSG00000163755.9	ENST00000296051.7	4611	17	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_10	41.9672025961941	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAGAAAAAGAAATTTTAAG	149120960	True	NA	NA	False	NA	NA	NA	149129637	149173732	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_149129941_149140003_149140499_149141016_149141189_149141294_149141381_149145353_149145547_149150598_149150681_149153493_149153649_149155106_149155216_149157349_149157532_149158665_149158847_149160045_149160280_149162147_149162334_149162689_149162879_149163841_149163950_149167033_149167241_149167892_149167984_149172094
transcript_149175.nnic	chr3	+	3763	16	NIC	ENSG00000163755.9	novel	4611	17	NA	NA	-157	0	combination_of_known_splicesites	TRUE	canonical	3	14	junction_10	111.564550323518	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTGTCTTCATTTATAA	NA	False	NA	24	True	AATAAA	-24	NA	149129480	149172961	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_149129941_149140003_149140499_149141016_149141189_149141294_149141381_149145353_149145547_149150598_149150681_149153493_149153649_149155106_149155216_149157349_149157532_149158665_149158847_149162147_149162334_149162689_149162879_149163841_149163950_149167033_149167241_149167892_149167984_149172094
transcript_149179.known	chr3	+	2745	16	FSM	ENSG00000163755.9	ENST00000460120.5	2745	16	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	102.20567498921	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACAAATGCTTTCAGGCT	149120960	True	NA	NA	False	NA	NA	NA	149129637	149172361	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_149129941_149141016_149141189_149141294_149141381_149145353_149145547_149150598_149150681_149153493_149153649_149155106_149155216_149157349_149157532_149158665_149158847_149160045_149160280_149162147_149162334_149162689_149162879_149163841_149163950_149167033_149167241_149167892_149167984_149172094
transcript_149196.known	chr3	+	1894	7	FSM	ENSG00000163755.9	ENST00000486530.1	1894	7	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_1	42.2794933218878	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATAAAGTTGTATTTT	149121013	True	NA	-18	True	NA	NA	NA	149129690	149154109	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_149129941_149140003_149140499_149141016_149141189_149141294_149141381_149145353_149145547_149150598_149150681_149153493
transcript_149198.known	chr3	+	556	2	FSM	ENSG00000163755.9	ENST00000494327.1	556	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTAAGTAGAACTCAGACT	149120961	True	NA	NA	False	TTTAAA	-4	NA	149129638	149130451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_149129941_149130197
transcript_149200.known	chr3	-	3727	6	FSM	ENSG00000163762.7	ENST00000296059.7	3727	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_5	7.2773621594641	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCCTCTAATTCTTTCTG	NA	False	NA	NA	False	AATAAA	-18	NA	149333636	149318497	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_149321493_149322255_149322437_149324879_149325023_149330329_149330420_149333205_149333400_149333512
transcript_149201.known	chr3	-	907	5	FSM	ENSG00000163762.7	ENST00000470080.5	907	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	2.58602010819715	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGAAATACTTCTGCCC	-149333443	True	NA	NA	False	NA	NA	NA	149333482	149321276	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_149321493_149322255_149322437_149324879_149325023_149330329_149330420_149333205
transcript_149202.known	chr3	-	1555	5	FSM	ENSG00000169908.12	ENST00000305366.8	1555	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.34520787991171	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTGTTGTTTAGTTTC	-149377631	True	NA	NA	False	AATAAA	-14	NA	149377649	149369021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_149369881_149371686_149371868_149375442_149375589_149375679_149375770_149377370
transcript_149204.known	chr3	-	5037	7	FSM	ENSG00000018408.15	ENST00000360632.8	5037	7	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_4	11.7992466802852	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGAGCTTTTGACTTTTC	-149654679	True	NA	-23	True	AATAAA	-17	NA	149658025	149517234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_149520990_149526012_149526126_149527835_149527970_149542334_149542538_149572863_149573001_149656875_149657310_149657764
transcript_149211.nic	chr3	-	2519	3	ISM	ENSG00000018408.15	ENST00000360632.8	5037	7	-23	53965	-7	1664	5prime_fragment	FALSE	canonical	3	62	junction_2	7	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAACACTTCCTCCAATC	-149654702	True	NA	NA	False	AAAAAG	-15	NA	149658048	149571199	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_149573001_149656875_149657310_149657764
transcript_149213.known	chr3	-	885	6	FSM	ENSG00000114744.9	ENST00000491617.5	885	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	303.780447033709	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTGAGGTCATAATCAGAA	-149745914	True	NA	NA	False	GATAAA	-32	NA	149752472	149741389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_149741719_149750256_149750383_149750677_149750852_149751402_149751486_149752209_149752288_149752377
transcript_149215.known	chr3	-	3694	5	FSM	ENSG00000114744.9	ENST00000473414.6	3694	5	0	0	0	0	multi-exon	FALSE	canonical	3	597	junction_1	19.1751792690447	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGTAGACTGAGGATCT	-149745931	True	NA	-7	True	AATAAA	-21	NA	149752489	149738471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_149741719_149750677_149750852_149751402_149751486_149752209_149752288_149752377
transcript_149219.known	chr3	+	2866	11	FSM	ENSG00000082996.20	ENST00000344229.7	2866	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	120.542150304364	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTAAGATCCAGTAAATGT	149812753	False	NA	-1	True	AATAAA	-12	NA	149812769	149962122	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_149813354_149813924_149814027_149846010_149846141_149852515_149852597_149872028_149872155_149895472_149895561_149902071_149902163_149911977_149912084_149921133_149921228_149960055_149960137_149960739
transcript_149223.known	chr3	+	1027	10	FSM	ENSG00000082996.20	ENST00000474348.5	1027	10	0	0	0	0	multi-exon	TRUE	canonical	3	80	junction_5	74.4427860511798	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTCTGACACAGACAGTA	149809935	True	NA	NA	False	AAAAAG	-23	NA	149813227	149960833	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_149813354_149846010_149846141_149852515_149852597_149872028_149872155_149895472_149895571_149902071_149902163_149911977_149912084_149921133_149921228_149960055_149960137_149960739
transcript_149230.known	chr3	+	767	9	FSM	ENSG00000082996.20	ENST00000467996.1	767	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	100.989789087808	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGTAGACCCTTGGCT	149809972	True	NA	NA	False	ACTAAA	-34	NA	149813264	149960750	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_149813354_149852515_149852597_149872028_149872155_149895472_149895561_149902071_149902163_149911977_149912084_149921133_149921228_149960055_149960137_149960739
transcript_149234.known	chr3	-	942	3	FSM	ENSG00000070087.15	ENST00000460404.5	942	3	0	0	0	0	multi-exon	FALSE	canonical	1	16	junction_2	445.5	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGCTTCCATCTTTTTT	-149955435	True	NA	NA	False	NA	NA	NA	149970904	149965688	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_149966265_149968357_149968544_149970724
transcript_149237.known	chr3	-	2261	3	FSM	ENSG00000070087.15	ENST00000239940.12	2047	3	-214	0	104	0	multi-exon	FALSE	canonical	3	307	junction_1	371	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTAGGCTCCTGTTGTT	-149971049	False	NA	-5	True	AATAAA	-16	NA	149971109	149964903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_149966587_149968357_149968551_149970724
transcript_149238.known	chr3	-	613	2	FSM	ENSG00000070087.15	ENST00000461868.1	613	2	0	0	0	0	multi-exon	FALSE	canonical	3	1049	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACGATAGAATATTCGTAT	-149955471	True	NA	NA	False	NA	NA	NA	149970940	149968153	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_149968551_149970724
transcript_149239.known	chr3	-	1620	3	FSM	ENSG00000070087.15	ENST00000481767.5	1620	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	453.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGACAGATGAAATAAATTTA	-149970655	False	NA	-4	True	ATTAAA	-13	NA	149970715	149964934	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_149966265_149968357_149968551_149970618
transcript_149240.known	chr3	+	11154	4	FSM	ENSG00000196428.13	ENST00000361875.8	11182	4	37	-9	37	9	multi-exon	FALSE	canonical	2	10	junction_2	50.2062413118794	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCTTGTCTGCTGCTAA	150406558	True	NA	15	True	AATAAA	-27	NA	150408334	150466431	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_150411309_150423048_150423121_150457075_150457128_150458375
transcript_149242.known	chr3	+	2093	3	FSM	ENSG00000196428.13	ENST00000466814.1	2093	3	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	2.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTGGCTCTATATGT	150410990	False	NA	18	True	ATTAAA	-15	NA	150411008	150460116	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_150411309_150457075_150457128_150458375
transcript_149247.known	chr3	+	3879	14	FSM	ENSG00000144895.12	ENST00000460851.6	3879	14	0	0	0	0	multi-exon	FALSE	canonical	3	543	junction_4	81.4929481103486	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTCTGGTATTTTGTTA	150537575	True	NA	NA	False	AATAAA	-18	NA	150546786	150586016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_150546831_150552355_150552426_150558387_150558463_150562541_150562661_150563514_150563615_150564298_150564382_150567692_150567767_150567901_150568047_150568175_150568293_150571957_150572530_150575648_150575763_150581617_150581747_150583199_150583266_150583845
transcript_149251.known	chr3	+	1913	13	FSM	ENSG00000144895.12	ENST00000487799.5	1913	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	203.272036525768	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAACCATTTATCCAAGAT	150537473	True	NA	-68	True	NA	NA	NA	150546684	150584023	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_150546831_150552355_150552426_150562541_150562661_150563514_150563615_150564298_150564382_150567692_150567767_150567901_150568047_150568175_150568293_150571957_150572530_150575648_150575763_150581617_150581747_150583199_150583266_150583845
transcript_149256.known	chr3	+	944	7	FSM	ENSG00000198843.14	ENST00000477889.5	944	7	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	393.291417258105	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTATGAAGGCCTGTACTG	150591265	True	NA	NA	False	NA	NA	NA	150603290	150627693	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_150603500_150618708_150618929_150622384_150622496_150623042_150623170_150624811_150624900_150627009_150627164_150627658
transcript_149257.known	chr3	+	3437	6	FSM	ENSG00000198843.14	ENST00000471696.6	3437	6	0	0	0	0	multi-exon	FALSE	canonical	3	787	junction_4	32.873089298087	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAAAGGAACTCCTACTT	150591295	True	NA	4	True	AATAAA	-16	NA	150603320	150630436	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_150603500_150622384_150622496_150623042_150623170_150624811_150624900_150627009_150627164_150627658
transcript_149259.known	chr3	+	1078	6	FSM	ENSG00000198843.14	ENST00000485923.1	1078	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	334.527726803026	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAGGTAAACATTAC	150591310	True	NA	NA	False	NA	NA	NA	150603335	150627905	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_150603687_150622384_150622496_150623042_150623170_150624811_150624900_150627009_150627164_150627658
transcript_149263.known	chr3	-	3022	3	FSM	ENSG00000120742.11	ENST00000239944.7	3022	3	0	0	0	0	multi-exon	FALSE	canonical	3	1882	junction_2	31	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGGGCCATGACTCTTC	-150512810	True	NA	-27	True	ATTAAA	-18	NA	150546496	150541997	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_150544499_150545702_150545779_150546051
transcript_149269.known	chr3	+	2083	14	FSM	ENSG00000144895.12	ENST00000273435.9	2083	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	199.121770005042	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGTTTTTATTATAAGT	150537582	True	NA	6	True	AATGAA	-21	NA	150546793	150584242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_150546831_150552355_150552426_150558387_150558463_150562556_150562661_150563514_150563615_150564298_150564382_150567692_150567767_150567901_150568047_150568175_150568293_150571957_150572530_150575648_150575763_150581617_150581747_150583199_150583266_150583845
transcript_14927.known	chr1	-	2120	13	FSM	ENSG00000176444.19	ENST00000355560.4	2120	13	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_10	108.348845043324	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCATCCCTGGAGTTGGA	NA	False	NA	-13	True	AATAAA	-19	NA	155273482	155262873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155263401_155263949_155264041_155264220_155264301_155264467_155264551_155264644_155264775_155265859_155265955_155266728_155266896_155268009_155268127_155268292_155268360_155268707_155268793_155269487_155269714_155270807_155270978_155273200
transcript_149270.known	chr3	+	1010	6	FSM	ENSG00000144895.12	ENST00000474505.5	1010	6	0	0	0	0	multi-exon	FALSE	canonical	3	543	junction_4	58.5778114988944	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCATTATCACAAATTATTAA	150537574	True	NA	-36	True	TTTAAA	-14	NA	150546785	150564899	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_150546831_150552355_150552426_150558387_150558463_150562541_150562661_150563514_150563615_150564298
transcript_149272.known	chr3	+	302	3	FSM	ENSG00000240137.7	ENST00000471093.6	539	3	78	159	78	-7	multi-exon	FALSE	canonical	3	7	junction_1	7.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTATCTGTCTGGTCGAG	150703341	False	NA	NA	False	TATAAA	-27	NA	150703563	150719988	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_150703668_150707931_150708010_150719868
transcript_149273.nic	chr3	-	2096	3	NIC	ENSG00000181788.4	novel	427	3	NA	NA	-47	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_2	86.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGCTTCATTTCCCTA	-150763513	False	NA	-19	True	AATAAA	-18	NA	150763524	150741124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_150742699_150762432_150762571_150763140
transcript_149274.known	chr3	-	427	3	FSM	ENSG00000181788.4	ENST00000482706.1	427	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	97	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACTTGCCAGGGGCTGTC	-150763392	True	NA	NA	False	NA	NA	NA	150763431	150742487	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_150742699_150762432_150762571_150763353
transcript_149280.known	chr3	-	2311	2	FSM	ENSG00000181788.4	ENST00000312960.4	2311	2	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	0	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGCTTCATTTCCCTA	-150761691	True	NA	-19	True	AATAAA	-18	NA	150763169	150741124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_150742699_150762432
transcript_149288.known	chr3	+	6309	1	FSM	ENSG00000169860.7	ENST00000305097.6	6309	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATGGCTTCTATGTTAT	152831282	True	NA	9	True	AATAAA	-15	NA	152835130	152841439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_152835100_152841400
transcript_149289.known	chr3	+	5149	15	FSM	ENSG00000114790.13	ENST00000465093.6	5149	15	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_4	10.265853841841	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTTGTGCTGGTGTGA	154119457	True	NA	7	True	TATAAA	-17	NA	154121389	154257825	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_154121520_154121941_154123076_154124409_154124450_154129573_154129720_154149388_154149446_154152771_154152933_154187684_154187838_154191288_154191419_154194643_154194719_154217868_154217959_154225855_154226011_154240369_154240580_154253115_154253184_154254719_154254825_154255330
transcript_149291.known	chr3	+	3781	15	FSM	ENSG00000114790.13	ENST00000496710.5	3781	15	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_13	23.7281585927792	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	154119483	True	NA	NA	False	NA	NA	NA	154121415	154256548	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_154121520_154121941_154123076_154124409_154124450_154129573_154129720_154149388_154149446_154152771_154152933_154187684_154187838_154191288_154191419_154194643_154194719_154217868_154217959_154225855_154226011_154240369_154240580_154253115_154253184_154254784_154254825_154255330
transcript_149292.nnic	chr3	+	3808	14	NIC	ENSG00000114790.13	novel	5149	15	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_9	26.4358103905652	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	154121363	154256548	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_154121520_154121941_154123076_154124409_154124450_154129573_154129720_154149388_154149446_154152771_154152933_154187684_154187838_154191288_154191419_154194643_154194719_154225855_154226011_154240369_154240580_154253115_154253184_154254719_154254825_154255330
transcript_149296.nic	chr3	+	1289	2	ISM	ENSG00000114790.13	ENST00000496710.5	3781	15	-52	133474	-26	-133474	5prime_fragment	FALSE	canonical	3	116	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAAAGTGGGCAGGAGTG	NA	False	NA	NA	False	GATAAA	-1	NA	154121363	154123074	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_154121520_154121941
transcript_149298.known	chr3	-	6723	25	FSM	ENSG00000174953.14	ENST00000496811.6	6723	25	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_22	74.5979501505683	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATGATTCAGTGAATTT	-154312429	True	NA	NA	False	AATAAA	-39	NA	154324487	154272545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_154276357_154276746_154276900_154277597_154277719_154280578_154280670_154280762_154280863_154283187_154283272_154284582_154284670_154284813_154284988_154288865_154288965_154289708_154289827_154292550_154292695_154293747_154293813_154295283_154295340_154299837_154299926_154300593_154300697_154300986_154301128_154303328_154303411_154304805_154304973_154305093_154305169_154306215_154306296_154309652_154309824_154311635_154311675_154315045_154315281_154316038_154316164_154324173
transcript_149299.nic	chr3	-	2649	22	ISM	ENSG00000174953.14	ENST00000496811.6	6723	25	-12	8034	-12	-2085	5prime_fragment	FALSE	canonical	3	234	junction_19	54.1508349443484	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAGCATTGAAGATTATT	-154312441	False	NA	NA	False	AAAAAG	-6	NA	154324499	154280579	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_154280670_154280762_154280863_154283187_154283272_154284582_154284670_154284813_154284988_154288865_154288965_154289708_154289827_154292550_154292695_154293747_154293813_154295283_154295340_154299837_154299926_154300593_154300697_154300986_154301128_154303328_154303411_154304805_154304973_154305093_154305169_154306215_154306296_154309652_154309824_154311635_154311675_154315045_154315281_154316038_154316164_154324173
transcript_149301.nic	chr3	-	2321	18	ISM	ENSG00000174953.14	ENST00000308361.10	3487	24	-39	9113	-12	0	5prime_fragment	FALSE	canonical	3	234	junction_15	54.6895611326861	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTGAACAGGAGTTGCT	-154312441	False	NA	NA	False	AATAAA	-14	NA	154324499	154284780	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_154284988_154288865_154288965_154289708_154289827_154292550_154292695_154293747_154293813_154295283_154295340_154299837_154299926_154300593_154300697_154300986_154301128_154303328_154303411_154304805_154304973_154305093_154305169_154306215_154306296_154309652_154309824_154311635_154311675_154315045_154315281_154316038_154316164_154324173
transcript_149303.nic	chr3	-	1388	10	ISM	ENSG00000174953.14	ENST00000329463.9	2985	25	-83	24869	-12	2304	5prime_fragment	FALSE	canonical	3	234	junction_7	62.7412873298155	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGCAATATATAAAGAACG	-154312441	False	NA	NA	False	AATAGA	-19	NA	154324499	154301039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_154301128_154303328_154303411_154304805_154304973_154305093_154305169_154306215_154306296_154309652_154309824_154311635_154311675_154315045_154315281_154316038_154316164_154324173
transcript_149309.known	chr3	-	833	3	FSM	ENSG00000174953.14	ENST00000491011.1	833	3	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_1	1.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGATGTGCTTTGTTC	-154312193	False	NA	NA	False	ATTAAA	-12	NA	154324251	154314650	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_154315281_154316038_154316164_154324173
transcript_149311.nic	chr3	-	397	2	ISM	ENSG00000174953.14	ENST00000491011.1	833	3	-248	1442	-12	-1442	5prime_fragment	FALSE	canonical	3	291	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATGATAAAGAGTCAGAAG	-154312441	False	NA	2	True	NA	NA	NA	154324499	154316092	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_154316164_154324173
transcript_149312.known	chr3	+	5593	23	FSM	ENSG00000196549.13	ENST00000460393.6	5593	23	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_1	13.0479091767339	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTTATGCCTAGTCAA	155079537	False	NA	8	True	AATAAA	-21	NA	155079671	155183704	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_155079757_155084157_155084328_155085058_155085095_155114993_155115156_155116478_155116560_155116663_155116760_155116867_155116987_155118745_155118812_155138101_155138237_155140190_155140293_155141990_155142128_155142236_155142331_155143442_155143572_155144358_155144458_155147143_155147225_155148549_155148654_155160389_155160449_155166901_155167022_155168491_155168626_155168731_155168798_155172116_155172213_155172535_155172613_155180359
transcript_149314.known	chr3	+	5552	23	FSM	ENSG00000196549.13	ENST00000675418.2	5552	23	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	13.857673829577	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAACAAACGTTTTTA	155079919	False	NA	-18	True	AATACA	-2	NA	155079931	155183678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_155080002_155084157_155084328_155085058_155085095_155114993_155115156_155116478_155116560_155116663_155116760_155116867_155116987_155118745_155118812_155138101_155138237_155140190_155140293_155141990_155142128_155142236_155142331_155143442_155143572_155144358_155144458_155147143_155147225_155148549_155148654_155160389_155160449_155166901_155167022_155168491_155168626_155168731_155168798_155172116_155172213_155172535_155172613_155180359
transcript_149318.known	chr3	+	5656	23	FSM	ENSG00000196549.13	ENST00000360490.7	5656	23	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	11.1244834590827	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTTATGCCTAGTCAA	155079683	True	NA	8	True	AATAAA	-21	NA	155080318	155183704	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_155080467_155084157_155084328_155085058_155085095_155114993_155115156_155116478_155116560_155116663_155116760_155116867_155116987_155118745_155118812_155138101_155138237_155140190_155140293_155141990_155142128_155142236_155142331_155143442_155143572_155144358_155144458_155147143_155147225_155148549_155148654_155160389_155160449_155166901_155167022_155168491_155168626_155168731_155168798_155172116_155172213_155172535_155172613_155180359
transcript_149326.known	chr3	+	5744	24	FSM	ENSG00000196549.13	ENST00000615825.2	5744	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	23.3428462019753	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTTATGCCTAGTCAA	155079752	True	NA	8	True	AATAAA	-21	NA	155079855	155183704	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_155080002_155084157_155084328_155085058_155085095_155114993_155115156_155116478_155116560_155116663_155116760_155116867_155116987_155118745_155118812_155138101_155138237_155140190_155140293_155141990_155142128_155142236_155142331_155143442_155143572_155144358_155144458_155147143_155147225_155148549_155148654_155156979_155157070_155160389_155160449_155166901_155167022_155168491_155168626_155168731_155168798_155172116_155172213_155172535_155172613_155180359
transcript_14935.known	chr1	-	1885	12	FSM	ENSG00000176444.19	ENST00000476983.5	1885	12	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_9	110.063167437823	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCATCCCTGGAGTTGGA	NA	False	NA	-13	True	AATAAA	-19	NA	155273329	155262873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155263401_155263949_155264041_155264220_155264301_155264467_155264551_155264644_155264775_155265859_155265955_155266728_155266896_155268009_155268127_155268292_155268360_155269487_155269717_155270807_155270978_155273200
transcript_149378.nnic	chr3	-	1389	5	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	57	junction_1	352.996104794373	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAGAGAGAGAGAAGAAAA	-155266147	True	NA	-8	True	GATAAA	-28	NA	155280499	155249554	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr3_-_155249757_155250149_155250827_155258618_155258683_155278366_155278560_155280246
transcript_149381.nnic	chr3	-	1370	5	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	104	junction_2	321.899052499382	87	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAGTATGTCATGAATTC	-155280545	False	NA	NA	False	AAAAAG	-19	NA	155280562	155250150	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr3_-_155250827_155258618_155258683_155265037_155265159_155278366_155278560_155280246
transcript_149384.nnic	chr3	-	1016	5	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	104	junction_2	321.899052499382	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAAGACTGTAATCCCAG	-155266147	True	NA	-4	True	AATAAA	-17	NA	155280499	155250441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr3_-_155250827_155258618_155258683_155265037_155265159_155278366_155278560_155280246
transcript_149388.nnic	chr3	-	951	5	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	104	junction_2	321.899052499382	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGCAGATGAACTACATAG	-155266147	True	NA	-25	True	ATTAAA	-28	NA	155280499	155250506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr3_-_155250827_155258618_155258683_155265037_155265159_155278366_155278560_155280246
transcript_149399.nnic	chr3	-	1186	4	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	173	junction_2	351.130555017171	130	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAGTATGTCATGAATTC	-155266147	True	NA	NA	False	AAAAAG	-19	NA	155280499	155250150	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr3_-_155250827_155258618_155258683_155278366_155278560_155280246
transcript_149403.nnic	chr3	-	895	4	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	173	junction_2	351.130555017171	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAAGACTGTAATCCCAG	-155266147	True	NA	-4	True	AATAAA	-17	NA	155280499	155250441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr3_-_155250827_155258618_155258683_155278366_155278560_155280246
transcript_149405.nnic	chr3	-	830	4	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	173	junction_2	351.130555017171	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGCAGATGAACTACATAG	-155266147	True	NA	-25	True	ATTAAA	-28	NA	155280499	155250506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr3_-_155250827_155258618_155258683_155278366_155278560_155280246
transcript_149410.known	chr3	-	6417	23	FSM	ENSG00000114805.18	ENST00000460012.7	6417	23	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_19	16.8169532720815	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGAACTTTTTTTACA	-155742378	True	NA	-4	True	ATTAAA	-16	NA	155745071	155479880	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_155483052_155485355_155485711_155488027_155488108_155488659_155488807_155490783_155490869_155492728_155492854_155494140_155494249_155494337_155494518_155497319_155497418_155500702_155500795_155504554_155504627_155514722_155514885_155523896_155524005_155549786_155549959_155554075_155554197_155564914_155565119_155568230_155568325_155583471_155583643_155586064_155586195_155593940_155594185_155596231_155596379_155704145_155704265_155744839
transcript_149413.nic	chr3	-	3234	22	ISM	ENSG00000114805.18	ENST00000460012.7	6417	23	-16	5503	-16	5358	5prime_fragment	FALSE	canonical	0	0	junction_18	15.6493608281957	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GACATTGAAGGAAAAGAAAA	-155742394	True	NA	NA	False	NA	NA	NA	155745087	155485383	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_155485711_155488027_155488108_155488659_155488807_155490783_155490869_155492728_155492854_155494140_155494249_155494337_155494518_155497319_155497418_155500702_155500795_155504554_155504627_155514722_155514885_155523896_155524005_155549786_155549959_155554075_155554197_155564914_155565119_155568230_155568325_155583471_155583643_155586064_155586195_155593940_155594185_155596231_155596379_155704145_155704265_155744839
transcript_149418.known	chr3	-	2404	7	FSM	ENSG00000169359.16	ENST00000359479.7	2404	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	43.5446769294352	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTACATATGAAATGTGT	-155851395	True	NA	-12	True	AATAAA	-18	NA	155854429	155826525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_155826820_155828181_155828378_155829687_155829904_155833467_155833586_155833856_155834042_155842431_155842620_155853222
transcript_149421.known	chr3	-	9266	6	FSM	ENSG00000169359.16	ENST00000643144.2	9266	6	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_5	27.7704879323357	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTGTTTTCATTTTTAT	-155851393	True	NA	NA	False	AATAAA	-13	NA	155854427	155821023	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_155828378_155829687_155829904_155833467_155833586_155833856_155834042_155842431_155842620_155853222
transcript_149424.known	chr3	-	1804	5	FSM	ENSG00000174928.16	ENST00000534941.2	1804	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	4.15331193145904	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCCAAAGTAGCTTTTTT	-155805907	True	NA	-11	True	AATAAA	-18	NA	155806272	155762617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_155763919_155767508_155767670_155775700_155775849_155802531_155802592_155806138
transcript_149427.known	chr3	-	3558	5	FSM	ENSG00000169359.16	ENST00000468581.2	3558	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	56.8347384968032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTAACTCTTACATATGA	-155851382	True	NA	-19	True	AATAAA	-11	NA	155854416	155826532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_155828378_155829687_155829904_155833467_155833586_155833856_155834042_155853222
transcript_149428.known	chr3	-	2546	5	FSM	ENSG00000169359.16	ENST00000644094.1	2546	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	60.613529842767	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTATGTTTATGGCAACAT	-155851216	False	NA	-52	True	NA	NA	NA	155854250	155827381	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_155828378_155829687_155829904_155833467_155833586_155842431_155842620_155853222
transcript_149434.known	chr3	-	2734	4	FSM	ENSG00000169359.16	ENST00000646424.1	2734	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	69.0716214438961	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGGCAGTACCATAATT	-155851412	True	NA	61	True	AGTAAA	-23	NA	155854446	155827268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_155828378_155829687_155829904_155833856_155834042_155853222
transcript_149439.known	chr3	+	8631	16	FSM	ENSG00000163655.16	ENST00000496455.7	8631	16	0	0	0	0	multi-exon	FALSE	canonical	3	787	junction_10	102.65865769627	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACAGACTTATGTGACTT	155861966	True	NA	4	True	ATTAAA	-17	NA	155870649	155944020	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_155870898_155893517_155893700_155897926_155898042_155903862_155903961_155906159_155906264_155910691_155910886_155911113_155911280_155914418_155914571_155916018_155916193_155919232_155919339_155922186_155922303_155925240_155925367_155931764_155931881_155934915_155935047_155936337_155936511_155937590
transcript_149444.known	chr3	+	2024	14	FSM	ENSG00000163655.16	ENST00000295920.7	2024	14	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_1	263.459101617029	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTACCGTGTGCAGTTTA	155861966	True	NA	-3	True	AATAAA	-15	NA	155870649	155937710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_155870898_155903862_155903961_155906159_155906264_155910691_155910886_155911113_155911280_155914418_155914571_155916018_155916193_155919232_155919339_155922186_155922303_155925240_155925367_155931764_155931881_155934915_155935047_155936337_155936511_155937590
transcript_149446.nic	chr3	+	1288	8	ISM	ENSG00000163655.16	ENST00000496455.7	8631	16	-52	29473	-52	3737	5prime_fragment	FALSE	canonical	3	802	junction_2	37.9586240906746	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGGGGATACTTTTGTT	155861914	True	NA	NA	False	AAGAAA	-3	NA	155870597	155914547	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_155870898_155893517_155893700_155897926_155898042_155903862_155903961_155906159_155906264_155910691_155910886_155911113_155911280_155914418
transcript_149447.known	chr3	+	1546	12	FSM	ENSG00000169282.18	ENST00000497291.5	1546	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_11	2.79018350058596	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGCAGTATCT	156457125	True	NA	NA	False	ATTAAA	-17	NA	156457209	156537241	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_156457359_156457452_156457533_156459826_156459872_156463701_156463747_156465642_156465687_156474733_156474821_156514363_156514450_156515099_156515221_156516269_156516365_156523826_156523948_156531408_156531498_156536657
transcript_149450.known	chr3	-	1039	5	FSM	ENSG00000114850.7	ENST00000467789.5	1039	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	525.159499580842	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTACAACTTCTTTTGA	-156531902	True	NA	NA	False	NA	NA	NA	156555149	156542820	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_156543270_156544307_156544440_156548865_156549004_156553654_156553782_156554956
transcript_149451.known	chr3	-	807	5	FSM	ENSG00000114850.7	ENST00000476217.5	807	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	520.651034763209	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGAGTACTAGGACGTTT	-156531878	True	NA	-5	True	ATTAAA	-17	NA	156555125	156543003	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_156543270_156544293_156544440_156548904_156549004_156553654_156553782_156554956
transcript_149458.known	chr3	-	873	4	FSM	ENSG00000114850.7	ENST00000467733.1	873	4	0	0	0	0	multi-exon	FALSE	canonical	3	1143	junction_1	78.8712030253544	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATGGCCAATGCAGTTA	-156531870	True	NA	NA	False	NA	NA	NA	156555117	156543953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_156544440_156548904_156549004_156553654_156553782_156554956
transcript_14946.nic	chr1	-	3219	11	NIC	ENSG00000176444.19	novel	2154	13	NA	NA	-25	0	intron_retention	FALSE	canonical	3	275	junction_9	58.0103439052037	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGGAGTTGGAGGTTTG	NA	False	NA	-7	True	AATAAA	-25	NA	155273529	155262867	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_155263401_155263949_155264041_155264220_155264301_155264467_155264551_155264644_155264775_155265859_155265955_155266728_155266896_155268009_155268127_155268292_155269717_155270807_155270978_155273200
transcript_149460.known	chr3	+	3861	6	FSM	ENSG00000163659.13	ENST00000295924.12	3861	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	1.35646599662505	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGTTGTTTTGGTTCC	156673674	True	NA	37	True	AATAAA	-38	NA	156674589	156706770	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_156674797_156677656_156678615_156694019_156694189_156695864_156696026_156703423_156703703_156704683
transcript_149461.known	chr3	-	509	2	FSM	ENSG00000243926.3	ENST00000664429.2	512	2	0	3	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTCTTCTAGGCTCTACC	-156674269	True	NA	NA	False	AATAAA	-17	NA	156674446	156671861	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_156672131_156674206
transcript_149463.known	chr3	-	2362	13	FSM	ENSG00000163660.12	ENST00000475298.5	2362	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	88.5159668584651	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTTCAAATACCTTATTT	-157152754	True	NA	-7	True	AATAAA	-24	NA	157160155	157147795	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_157148590_157149286_157149386_157149484_157149597_157149835_157149978_157150064_157150170_157150281_157150382_157151728_157151931_157152176_157152242_157153035_157153157_157157010_157157084_157158865_157158976_157159404_157159480_157159791
transcript_149465.known	chr3	-	2457	13	FSM	ENSG00000163660.12	ENST00000631619.1	2457	13	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	94.5546211926677	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTTCAAATACCTTATTT	NA	False	NA	-7	True	AATAAA	-24	NA	157160363	157147795	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_157148590_157149286_157149386_157149484_157149597_157149835_157149978_157150064_157150170_157150281_157150382_157151916_157151931_157152176_157152242_157153035_157153157_157156935_157157084_157158865_157158976_157159404_157159480_157159791
transcript_149468.nic	chr3	-	2251	13	NIC	ENSG00000163660.12	novel	2457	13	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_6	87.2777733573802	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTTCAAATACCTTATTT	NA	False	NA	-7	True	AATAAA	-24	NA	157160232	157147795	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_157148590_157149286_157149386_157149484_157149597_157149835_157149978_157150064_157150170_157150281_157150382_157151916_157151931_157152176_157152242_157153035_157153157_157157010_157157084_157158865_157158976_157159404_157159480_157159791
transcript_149472.nic	chr3	-	2294	12	NIC	ENSG00000163660.12	novel	2362	13	NA	NA	-54	56	combination_of_known_junctions	FALSE	canonical	3	83	junction_8	55.3587846806838	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTACTGGTTTTCTGA	NA	False	NA	-4	True	AATAAA	-31	NA	157160232	157147738	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_157148590_157149286_157149386_157149484_157149597_157149835_157149978_157150064_157150170_157150281_157150382_157152176_157152242_157153035_157153157_157157010_157157084_157158865_157158976_157159404_157159480_157159791
transcript_149480.known	chr3	-	2322	11	FSM	ENSG00000163660.12	ENST00000295926.8	2322	11	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_8	34.9651254824003	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTTGCTTTTGAATGG	-157152746	True	NA	NA	False	ATTAAA	-29	NA	157160147	157147552	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_157148590_157149286_157149386_157149484_157149597_157149835_157149978_157150064_157150170_157150281_157150382_157152176_157152242_157153035_157153157_157158865_157158976_157159404_157159480_157159791
transcript_149492.known	chr3	-	1603	11	FSM	ENSG00000163660.12	ENST00000476367.5	1603	11	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_7	57.7308409777651	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAATTTCAGTTAGAAA	-157152709	True	NA	NA	False	NA	NA	NA	157160110	157149004	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_157149386_157149484_157149597_157149835_157149978_157150064_157150170_157150281_157150382_157152176_157152242_157153035_157153157_157157010_157157084_157158865_157158976_157159404_157159480_157159791
transcript_149500.known	chr3	-	1998	11	FSM	ENSG00000163660.12	ENST00000461804.5	1998	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	72.245484287947	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACTTATGTCCCTAAT	NA	False	NA	NA	False	ATTAAA	-16	NA	157160760	157146507	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_157146608_157149286_157149386_157149484_157149597_157149835_157149978_157150064_157150170_157150281_157150382_157152176_157152242_157153035_157153157_157158865_157158976_157159404_157159480_157159791
transcript_149504.nic	chr3	-	1202	9	ISM	ENSG00000163660.12	ENST00000477127.5	1464	11	-54	654	-54	0	5prime_fragment	FALSE	canonical	3	15	junction_5	74.4218339937951	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGTAGCCTTACAAGAA	NA	False	NA	NA	False	AAAAAG	-13	NA	157160232	157149940	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_157149978_157150064_157150170_157150281_157150382_157152176_157152242_157153035_157153157_157156935_157157084_157158865_157158976_157159404_157159480_157159791
transcript_149505.nic	chr3	-	1127	9	ISM	ENSG00000163660.12	ENST00000476367.5	1603	11	-122	936	-54	0	5prime_fragment	FALSE	canonical	3	83	junction_5	57.3801740586415	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGTAGCCTTACAAGAA	NA	False	NA	NA	False	AAAAAG	-13	NA	157160232	157149940	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_157149978_157150064_157150170_157150281_157150382_157152176_157152242_157153035_157153157_157157010_157157084_157158865_157158976_157159404_157159480_157159791
transcript_149515.nic	chr3	-	1090	8	ISM	ENSG00000163660.12	ENST00000476367.5	1603	11	-122	1060	-54	63	5prime_fragment	FALSE	canonical	3	83	junction_4	61.2429087940067	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTCTCTATTTACTCGTT	NA	False	NA	NA	False	AAAAAG	-1	NA	157160232	157150064	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_157150170_157150281_157150382_157152176_157152242_157153035_157153157_157157010_157157084_157158865_157158976_157159404_157159480_157159791
transcript_149524.known	chr3	-	753	3	FSM	ENSG00000163660.12	ENST00000471044.1	753	3	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_1	9.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGAGGCAGTTGCATTTA	-157152757	True	NA	NA	False	AAAAAG	-29	NA	157160158	157158664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_157158976_157159404_157159480_157159791
transcript_149527.known	chr3	-	4191	14	FSM	ENSG00000197415.12	ENST00000362010.7	4191	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_13	9.96027613029458	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGTGATTTGTTATGCA	-157503374	True	NA	0	True	AATAAA	-23	NA	157503416	157259741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_157261371_157265525_157265663_157286556_157286675_157313620_157313756_157317061_157317202_157363363_157363762_157364302_157364513_157381155_157381377_157413880_157414091_157428321_157428489_157460180_157460356_157470313_157470530_157495211_157495507_157503276
transcript_149529.known	chr3	-	3044	14	FSM	ENSG00000197415.12	ENST00000392832.6	3044	14	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_7	11.3215509005127	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAATAAAAGGAGCT	-157498704	True	NA	NA	False	AATATA	-19	NA	157499554	157260908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_157261371_157265525_157265663_157286556_157286675_157313620_157313756_157317061_157317202_157363363_157363762_157364302_157364513_157381155_157381377_157413880_157414091_157428321_157428489_157460180_157460356_157470313_157470530_157495211_157495507_157499394
transcript_149530.known	chr3	+	1884	3	FSM	ENSG00000163661.4	ENST00000295927.4	1884	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGTACTTTTCTCTTTTCA	157436816	True	NA	NA	False	TATAAA	-24	NA	157436849	157443633	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_157437064_157437512_157437915_157442365
transcript_149532.known	chr3	+	2597	10	FSM	ENSG00000174891.14	ENST00000611884.5	2597	10	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	11.842588972866	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGATTTGTGTGGTTTTT	158107234	True	NA	NA	False	AATAAA	-16	NA	158110088	158545730	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_158110224_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934_158461004_158537091_158537199_158543334_158543488_158544182
transcript_149535.known	chr3	+	1607	10	FSM	ENSG00000174891.14	ENST00000476899.6	1607	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	23.6032012894673	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACCCTAAACAATGTAAGC	158107222	True	NA	-89	True	AATAAA	-3	NA	158110076	158544734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_158110212_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934_158461010_158537091_158537199_158543334_158543488_158544182
transcript_149538.known	chr3	+	2677	9	FSM	ENSG00000174891.14	ENST00000482822.3	2677	9	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	12.5243512806053	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACTAAACATGCCAGAGA	158107220	True	NA	NA	False	NA	NA	NA	158110074	158545101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_158110224_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934_158461004_158537091_158537199_158543334
transcript_149539.known	chr3	+	2746	9	FSM	ENSG00000174891.14	ENST00000683137.1	2746	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	23.2150274606773	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACTAAACATGCCAGAGA	158110375	True	NA	NA	False	NA	NA	NA	158110386	158545101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_158110605_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934_158461004_158537091_158537199_158543334
transcript_149543.known	chr3	+	1727	10	FSM	ENSG00000174891.14	ENST00000295930.7	1727	10	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	9.79795897113271	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTACTAGATGCTCCTT	NA	False	NA	12	True	AATAAA	-24	NA	158110051	158544835	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_158110212_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934_158461004_158537091_158537199_158543334_158543488_158544182
transcript_149545.known	chr3	+	769	7	FSM	ENSG00000174891.14	ENST00000471994.5	769	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	14.2058282249067	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAGAAATGAGGAAGAAG	158107213	True	NA	NA	False	NA	NA	NA	158110067	158460962	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_158110224_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934
transcript_149546.known	chr3	+	1757	7	FSM	ENSG00000174891.14	ENST00000684683.1	1757	7	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	11.6571389666971	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTCAAAACCAAGCGAAAAAA	158107234	True	NA	NA	False	NA	NA	NA	158110088	158461983	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_158110212_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934
transcript_149551.known	chr3	+	7727	4	FSM	ENSG00000174891.14	ENST00000683394.1	7727	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	18.0800688297608	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGCAAAATTTATTGAAAAA	158107234	True	NA	NA	False	NA	NA	NA	158110088	158210341	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_158110224_158122102_158122299_158123865_158123992_158203071
transcript_149552.known	chr3	+	1069	4	FSM	ENSG00000174891.14	ENST00000684156.1	1069	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	14.8174071805952	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTATTGTTTAAGCCTT	158107234	True	NA	NA	False	TATAAA	-29	NA	158110088	158203695	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_158110212_158122102_158122299_158123865_158123992_158203071
transcript_149553.known	chr3	+	2213	8	FSM	ENSG00000178053.20	ENST00000466246.7	2213	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	226.008849384266	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTGTTGAAATTGAGCA	158566972	True	NA	4	True	AATAAA	-16	NA	158571193	158606456	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_158571348_158592433_158592582_158593381_158593427_158596861_158596946_158598079_158598209_158600013_158600174_158602806_158602940_158605096
transcript_149556.known	chr3	+	1247	8	FSM	ENSG00000178053.20	ENST00000484955.5	1247	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	231.673063093803	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAGTAAATTGAGTCTAT	158566951	True	NA	15	True	AATAAA	-18	NA	158571172	158605397	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_158571392_158588851_158588925_158592433_158592582_158596861_158596946_158598079_158598209_158600013_158600174_158602806_158602940_158605096
transcript_149557.known	chr3	+	2168	7	FSM	ENSG00000178053.20	ENST00000355893.11	2168	7	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_1	41.6949903732118	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTGTTGAAATTGAGCA	158566972	True	NA	4	True	AATAAA	-16	NA	158571193	158606456	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_158571348_158592433_158592582_158596861_158596946_158598079_158598209_158600013_158600174_158602806_158602940_158605096
transcript_149559.known	chr3	+	2222	7	FSM	ENSG00000178053.20	ENST00000359117.9	2222	7	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	154.502067587747	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTGTTGAAATTGAGCA	158566962	True	NA	4	True	AATAAA	-16	NA	158571183	158606456	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_158571392_158592433_158592582_158596861_158596946_158598079_158598209_158600013_158600174_158602806_158602940_158605096
transcript_149561.known	chr3	+	992	6	FSM	ENSG00000178053.20	ENST00000491767.6	992	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	203.224014329016	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAGTAAATTGAGTCTAT	158566941	True	NA	15	True	AATAAA	-18	NA	158571162	158605397	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_158571348_158596861_158596946_158598079_158598209_158600013_158600174_158602806_158602940_158605096
transcript_149564.known	chr3	+	1311	7	FSM	ENSG00000178053.20	ENST00000652045.1	1311	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	227.533147768261	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACTAGGGTGATATTAAT	158566972	True	NA	NA	False	AAAAAG	-20	NA	158571193	158605604	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_158571392_158592433_158592582_158596861_158596946_158598128_158598209_158600013_158600174_158602806_158602940_158605096
transcript_149565.known	chr3	+	3453	19	FSM	ENSG00000168827.15	ENST00000264263.9	3453	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	146.371725749085	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTCCTTTGCTTTTCTTG	158637361	True	NA	12	True	AATAAA	-13	NA	158644596	158692569	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_158644716_158645628_158645782_158646164_158646298_158646742_158646948_158649040_158649158_158650004_158650062_158652095_158652247_158653309_158653468_158654546_158654632_158658921_158659060_158660873_158660976_158662627_158662685_158665336_158665475_158666303_158666387_158681994_158682158_158684523_158684669_158690162_158690324_158691138_158691193_158691335
transcript_149567.known	chr3	+	6478	18	FSM	ENSG00000168827.15	ENST00000486715.6	6478	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	98.9306142505249	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTGGATTATGGATGT	158637291	True	NA	17	True	AATAAA	-30	NA	158644526	158695581	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_158644716_158645628_158645782_158646164_158646298_158646742_158646948_158649040_158649158_158652095_158652247_158653309_158653468_158654546_158654632_158658921_158659060_158660873_158660976_158662627_158662685_158665336_158665475_158666303_158666387_158681994_158682158_158684523_158684669_158690162_158690324_158691138_158691193_158691335
transcript_149575.known	chr3	-	1071	6	FSM	ENSG00000079257.8	ENST00000264265.4	1071	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_3	11.3030969207558	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTTTAATTACGTTGCA	-158671946	True	NA	-1	True	AATAAA	-21	NA	158672648	158666413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_158666745_158667011_158667075_158668995_158669133_158669432_158669611_158670956_158671020_158672349
transcript_149576.known	chr3	+	3470	18	FSM	ENSG00000168827.15	ENST00000478254.5	3470	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	100.333423382993	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTTGCTTTTCTTGACT	158637292	True	NA	15	True	AATAAA	-16	NA	158644527	158692572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_158644716_158645628_158645782_158646164_158646298_158646742_158646948_158649040_158649158_158652095_158652251_158653313_158653468_158654546_158654632_158658921_158659071_158660882_158660976_158662627_158662685_158665336_158665475_158666303_158666387_158681994_158682158_158684523_158684669_158690162_158690324_158691138_158691193_158691335
transcript_149577.known	chr3	+	1594	16	FSM	ENSG00000118855.21	ENST00000264266.12	1594	16	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	8.67691701521277	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCAAAGTGTATTTGTG	158801049	True	NA	NA	False	AATATA	-3	NA	158802090	158829116	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_158802316_158804318_158804372_158805361_158805475_158807039_158807083_158807395_158807464_158809178_158809288_158813964_158814068_158819648_158819748_158820214_158820327_158821596_158821654_158821983_158822141_158823427_158823526_158824123_158824237_158826014_158826063_158827279_158827338_158828978
transcript_149579.known	chr3	+	2121	15	FSM	ENSG00000118855.21	ENST00000484166.5	2121	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	18.6822244447518	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTTGATGTCTTCTTTTG	158801009	True	NA	8	True	ATTAAA	-15	NA	158802050	158829716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_158802316_158804318_158804372_158807039_158807083_158807395_158807464_158809178_158809288_158813964_158814068_158819648_158819748_158820214_158820327_158821596_158821654_158821983_158822141_158823427_158823526_158824123_158824237_158826014_158826063_158827279_158827338_158828978
transcript_149582.known	chr3	-	839	4	FSM	ENSG00000118849.10	ENST00000479756.1	839	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.816496580927726	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCAAGTATTGTTTCAG	-158732424	True	NA	NA	False	AATAAA	-18	NA	158732442	158704650	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_158704928_158710737_158710934_158713796_158713860_158732139
transcript_149584.nnic	chr3	+	2049	8	FSM	ENSG00000283154.3	ENST00000689690.1	2296	8	-24	271	-24	0	multi-exon	FALSE	canonical	2	4	junction_1	49.767623275887	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCATATGTCTTTTTGCT	159731903	True	NA	10	True	AATAAA	-18	NA	159732350	159897358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_159732415_159764442_159765139_159866162_159866282_159886206_159886325_159887707_159887906_159888819_159888944_159892096_159892191_159896722
transcript_149588.nic	chr3	+	2079	8	NIC	ENSG00000283154.3	novel	1884	7	NA	NA	90	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	52.3598225780814	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCATATGTCTTTTTGCT	159763712	True	NA	10	True	AATAAA	-18	NA	159764091	159897358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_159764225_159764442_159765100_159866162_159866282_159886206_159886325_159887707_159887906_159888819_159888944_159892096_159892191_159896722
transcript_149589.nic	chr3	+	2174	8	NIC	ENSG00000283154.3	novel	1884	7	NA	NA	34	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	43.4492432004733	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCATATGTCTTTTTGCT	159763968	False	NA	10	True	AATAAA	-18	NA	159764035	159897358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_159764225_159764442_159765139_159866162_159866282_159886206_159886325_159887707_159887906_159888819_159888944_159892096_159892191_159896722
transcript_149596.nic	chr3	+	1159	5	NIC	ENSG00000283154.3	novel	1884	7	NA	NA	90	-4741	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	37.3697738821096	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCAAGCTGAAGCCAAAAT	159763712	True	NA	NA	False	AAGAAA	-1	NA	159764091	159887800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_159764225_159764442_159765139_159866162_159866282_159886206_159886325_159887707
transcript_149599.known	chr3	+	1645	7	FSM	ENSG00000151967.18	ENST00000445224.6	1645	7	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	25.9293913027925	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATATGTCTTTTTGCTCA	NA	False	NA	12	True	AATAAA	-20	NA	159839860	159897360	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_159840215_159866162_159866282_159886206_159886325_159887707_159887906_159888819_159888944_159892096_159892191_159896722
transcript_1496.known	chr1	+	3000	6	FSM	ENSG00000157916.20	ENST00000378513.7	3000	6	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	382.710543361429	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACTTCTCAACTGTATG	2381507	True	NA	30	True	AATAAA	-22	NA	2391774	2405442	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_2391959_2395783_2395872_2397115_2397221_2400856_2400936_2402206_2402343_2403034
transcript_149601.known	chr3	+	765	4	FSM	ENSG00000151967.18	ENST00000472483.5	765	4	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	14.290634073484	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGATTGATGTCTACTG	159840038	False	NA	NA	False	AGTAAA	-6	NA	159840098	159888119	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_159840215_159866162_159866282_159886206_159886325_159887707
transcript_149602.known	chr3	+	1000	4	FSM	ENSG00000151967.18	ENST00000495954.5	1000	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	62.9567752950829	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTGAATGTTGACTAC	159839796	True	NA	NA	False	NA	NA	NA	159839939	159897234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_159840215_159866162_159866282_159892096_159892191_159896722
transcript_149603.known	chr3	+	1444	7	FSM	ENSG00000168811.7	ENST00000305579.7	1444	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.70782512765993	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCAATTTTTCTAATGT	159988755	True	NA	NA	False	AATAAA	-19	NA	159988834	159996019	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_159989175_159990166_159990313_159993011_159993126_159993450_159993493_159993567_159993610_159993700_159993845_159995403
transcript_149604.known	chr3	+	1136	6	FSM	ENSG00000168811.7	ENST00000496308.1	1136	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.72046505340853	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCACATGATACCTCTGAT	159988790	False	NA	NA	False	NA	NA	NA	159988869	159995671	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_159989175_159990166_159990313_159993011_159993126_159993450_159993610_159993700_159993845_159995403
transcript_149605.nic	chr3	-	1078	3	FSM	ENSG00000213186.8	ENST00000309784.9	3824	3	-85	2831	-85	317	multi-exon	FALSE	canonical	3	41	junction_1	2.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTGAAAGAAGAATGGAGC	-160449839	False	NA	0	True	NA	NA	NA	160449871	160438333	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_160439187_160448725_160448796_160449716
transcript_149606.nic	chr3	-	892	3	FSM	ENSG00000213186.8	ENST00000309784.9	3824	3	-85	3017	-85	131	multi-exon	FALSE	canonical	3	41	junction_1	2.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGAAAGAATGAAGGAAATA	-160449839	False	NA	NA	False	AATATA	-10	NA	160449871	160438519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_160439187_160448725_160448796_160449716
transcript_149607.nic	chr3	-	832	3	FSM	ENSG00000213186.8	ENST00000309784.9	3824	3	-85	3077	-85	71	multi-exon	FALSE	canonical	3	41	junction_1	2.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCTAACGGCTCTCTGT	-160449839	False	NA	NA	False	NA	NA	NA	160449871	160438579	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_160439187_160448725_160448796_160449716
transcript_149608.nic	chr3	-	741	3	FSM	ENSG00000213186.8	ENST00000309784.9	3824	3	-85	3168	-85	-20	multi-exon	FALSE	canonical	3	41	junction_1	2.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCATTCTGAGAAAATGAT	-160449839	False	NA	20	True	NA	NA	NA	160449871	160438670	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_160439187_160448725_160448796_160449716
transcript_149609.known	chr3	+	2792	1	FSM	ENSG00000180044.6	ENST00000326474.5	2792	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATGTGTGGCTATATGG	160225409	False	NA	10	True	ATTAAA	-42	NA	160225421	160228213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_160225400_160228200
transcript_149612.known	chr3	-	3073	21	FSM	ENSG00000068885.15	ENST00000496589.5	3073	21	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_19	26.4988679003462	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGTTACCATTAATTTC	-160399110	False	NA	-3	True	AATAAA	-19	NA	160399273	160258179	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_160258636_160268412_160268537_160277305_160277479_160277580_160277671_160279192_160279365_160280666_160280815_160282477_160282614_160285803_160285869_160300882_160301047_160303914_160303990_160307662_160307782_160319759_160319940_160356012_160356151_160357488_160357579_160366042_160366153_160375811_160375881_160377429_160377541_160381502_160381719_160383436_160383505_160384405_160384647_160399145
transcript_149617.known	chr3	-	3999	20	FSM	ENSG00000068885.15	ENST00000326448.12	3999	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	27.5762353025681	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCTCATATCCTAGAATT	-160398006	True	NA	-2	True	AATAAA	-33	NA	160399225	160256985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_160258636_160268412_160268537_160277305_160277479_160277580_160277671_160279192_160279365_160280666_160280815_160282477_160282614_160285803_160285869_160300882_160301047_160303914_160303990_160307662_160307782_160319759_160319940_160356012_160356151_160357488_160357579_160366042_160366153_160375811_160375881_160377429_160377541_160381502_160381725_160384563_160384647_160399145
transcript_149634.nic	chr3	+	1824	10	ISM	ENSG00000113810.16	ENST00000357388.8	5116	24	-360	18616	16	-66	5prime_fragment	FALSE	canonical	3	283	junction_1	53.1729068670442	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAGAAAGAAGAAAAAAAATT	160399043	True	NA	28	True	AATGAA	-37	NA	160399289	160416337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_160399750_160400821_160400966_160401914_160402094_160402675_160402868_160404327_160404505_160411919_160412085_160412325_160412454_160413472_160413614_160414366_160414518_160416250
transcript_149638.nic	chr3	+	1286	9	ISM	ENSG00000113810.16	ENST00000357388.8	5116	24	-14	20541	-2	-88	5prime_fragment	FALSE	canonical	3	283	junction_1	52.85830114561	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACACAGCTAGATTTGGA	160394132	True	NA	NA	False	AATAAA	-34	NA	160399635	160414412	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_160399750_160400821_160400966_160401914_160402094_160402675_160402868_160404327_160404505_160411919_160412085_160412325_160412454_160413472_160413614_160414366
transcript_149639.nic	chr3	+	1735	9	ISM	ENSG00000113810.16	ENST00000357388.8	5116	24	-360	20438	16	0	5prime_fragment	FALSE	canonical	3	283	junction_1	52.85830114561	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGTAGGTGTTAGAAAAAAA	160399043	True	NA	NA	False	AGTAAA	-41	NA	160399289	160414515	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_160399750_160400821_160400966_160401914_160402094_160402675_160402868_160404327_160404505_160411919_160412085_160412325_160412454_160413472_160413614_160414366
transcript_149645.nic	chr3	+	1516	8	ISM	ENSG00000113810.16	ENST00000357388.8	5116	24	-360	21410	16	-40	5prime_fragment	FALSE	canonical	3	283	junction_1	52.6164403577282	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAATGAGAAGAGCAATATA	160399043	True	NA	42	True	AAGAAA	-1	NA	160399289	160413543	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_160399750_160400821_160400966_160401914_160402094_160402675_160402868_160404327_160404505_160411919_160412085_160412325_160412454_160413472
transcript_149646.nic	chr3	+	1586	8	ISM	ENSG00000113810.16	ENST00000357388.8	5116	24	-360	21340	16	30	5prime_fragment	FALSE	canonical	3	283	junction_1	52.6164403577282	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATAATATTTTGGGAAGT	160399043	True	NA	NA	False	AATAAA	-21	NA	160399289	160413613	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_160399750_160400821_160400966_160401914_160402094_160402675_160402868_160404327_160404505_160411919_160412085_160412325_160412454_160413472
transcript_149653.nic	chr3	+	1362	7	ISM	ENSG00000113810.16	ENST00000468653.5	1756	9	-360	2130	16	-83	5prime_fragment	TRUE	canonical	3	283	junction_1	49.5089778614838	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAGAGAAAAACATAGCTAT	160399043	True	NA	5	True	NA	NA	NA	160399289	160412370	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_160399750_160400821_160400966_160401914_160402094_160402675_160402868_160404327_160404505_160411919_160412085_160412325
transcript_149654.nic	chr3	+	1088	7	ISM	ENSG00000113810.16	ENST00000468653.5	1756	9	-3	2047	-3	0	5prime_fragment	FALSE	canonical	3	283	junction_1	49.5089778614838	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGCCTTGATTGATAT	160394143	True	NA	88	True	AAAAAG	-24	NA	160399646	160412453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_160399750_160400821_160400966_160401914_160402094_160402675_160402868_160404327_160404505_160411919_160412085_160412325
transcript_149671.known	chr3	-	860	3	FSM	ENSG00000213186.8	ENST00000479460.5	860	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	20	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGGCGATAAGGAAGCTG	-160449693	False	NA	40	True	NA	NA	NA	160449725	160438650	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_160439187_160448725_160448796_160449471
transcript_149672.known	chr3	-	3824	3	FSM	ENSG00000213186.8	ENST00000309784.9	3824	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	2.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCACTGTCTTAATGAGA	-160444730	True	NA	-2	True	AATAAA	-18	NA	160449786	160435502	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_160439187_160448725_160448796_160449716
transcript_149675.known	chr3	-	577	3	FSM	ENSG00000213186.8	ENST00000494486.1	577	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	17.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAATTAGTTTGTGGTC	-160449581	False	NA	NA	False	ATTAAA	-19	NA	160449613	160438848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_160439187_160448725_160448796_160449444
transcript_149676.known	chr3	-	603	3	FSM	ENSG00000213186.8	ENST00000496222.1	603	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	18	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACTGACACACACTGGAC	-160444704	True	NA	-40	True	AAGAAA	-30	NA	160449760	160438730	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_160439187_160448725_160448796_160449683
transcript_149680.known	chr3	+	3998	24	FSM	ENSG00000113810.16	ENST00000469762.5	3998	24	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	130.794807479181	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATGAAACTGGTTTCTGT	160394146	True	NA	18	True	TATAAA	-21	NA	160399649	160433910	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_160399750_160400821_160400966_160401989_160402094_160402675_160402868_160404327_160404505_160411919_160412085_160412325_160412454_160413472_160413614_160414366_160414518_160416250_160416416_160417722_160417957_160419357_160419544_160420739_160420902_160423424_160423651_160423760_160423841_160424866_160425020_160426073_160426201_160428752_160428943_160430598_160430744_160431031_160431206_160431642_160431826_160432282_160432516_160433025_160433210_160433656
transcript_149681.known	chr3	+	1553	9	FSM	ENSG00000113810.16	ENST00000489573.5	1553	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	129.299978248258	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGTAGGTGTTAGAAAAAAA	160394162	True	NA	NA	False	AGTAAA	-41	NA	160399665	160414515	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_160399750_160400627_160400966_160401914_160402094_160402675_160402868_160404327_160404505_160411919_160412085_160412325_160412454_160413472_160413614_160414366
transcript_149682.known	chr3	-	8952	17	FSM	ENSG00000186432.10	ENST00000334256.9	8952	17	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_12	21.5876664730119	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAATTTCTCAGATGAACT	-160563591	True	NA	-16	True	AATAAA	-16	NA	160565571	160495006	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_160502203_160504957_160505053_160508106_160508270_160509799_160509872_160514076_160514182_160515451_160515581_160521778_160521911_160525799_160525845_160525937_160526108_160527952_160528040_160530854_160530941_160531461_160531558_160535512_160535566_160535660_160535691_160535807_160535898_160536795_160536841_160565213
transcript_149687.known	chr3	-	8880	16	FSM	ENSG00000186432.10	ENST00000676866.1	8880	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	78.0264912278729	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAATTTCTCAGATGAACT	-160563591	True	NA	-16	True	AATAAA	-16	NA	160565571	160495006	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_160502203_160504957_160505053_160508106_160508270_160514076_160514182_160515451_160515581_160521778_160521911_160525799_160525845_160525937_160526108_160527952_160528040_160530854_160530941_160531461_160531558_160535512_160535566_160535660_160535691_160535807_160535898_160536795_160536841_160565213
transcript_149689.nic	chr3	-	2289	13	ISM	ENSG00000186432.10	ENST00000483437.2	1854	18	-168	11210	-36	0	5prime_fragment	FALSE	canonical	3	267	junction_8	24.421074687427	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCACAAAGTAGAAGAAACAA	NA	False	NA	NA	False	NA	NA	NA	160565607	160513249	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_160514182_160515451_160515581_160521778_160521911_160525799_160525845_160525937_160526108_160527952_160528040_160530854_160530941_160531461_160531558_160535512_160535566_160535660_160535691_160535807_160535898_160536795_160536841_160565213
transcript_149690.nic	chr3	-	1349	12	ISM	ENSG00000186432.10	ENST00000483437.2	1854	18	-168	13420	-36	-2210	5prime_fragment	FALSE	canonical	3	267	junction_7	24.7696828821575	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATAAAGTAAGTACTATT	NA	False	NA	NA	False	NA	NA	NA	160565607	160515459	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_160515581_160521778_160521911_160525799_160525845_160525937_160526108_160527952_160528040_160530854_160530941_160531461_160531558_160535512_160535566_160535660_160535691_160535807_160535898_160536795_160536841_160565213
transcript_149693.known	chr3	+	10906	4	FSM	ENSG00000163590.14	ENST00000498165.6	10906	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	4.32049379893857	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGACTGCTGGTATTCT	160756210	True	NA	5	True	AATAAA	-23	NA	160756230	161078902	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_160756708_160961735_160961911_161065402_161065565_161068810
transcript_149694.nic	chr3	+	2689	16	NIC	ENSG00000169251.13	novel	3028	16	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	98.6713061972257	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACTGTGTGGAACATTT	NA	False	NA	8	True	AATAAA	-14	NA	161221268	161252004	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_161221332_161221993_161222058_161224929_161225065_161227246_161227344_161233398_161233480_161234726_161234856_161235121_161235213_161238112_161238192_161238729_161238827_161241045_161241164_161242507_161242654_161246335_161246449_161247257_161247331_161249453_161249561_161250255_161250327_161250779
transcript_149695.nic	chr3	+	2992	16	NIC	ENSG00000169251.13	novel	3028	16	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	98.6713061972257	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCGCATTGGTGTCATAT	NA	False	NA	31	True	AATAAA	-32	NA	161221268	161252307	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_161221332_161221993_161222058_161224929_161225065_161227246_161227344_161233398_161233480_161234726_161234856_161235121_161235213_161238112_161238192_161238729_161238827_161241045_161241164_161242507_161242654_161246335_161246449_161247257_161247331_161249453_161249561_161250255_161250327_161250779
transcript_149697.known	chr3	+	3028	16	FSM	ENSG00000169251.13	ENST00000351193.7	3028	16	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_1	42.8908692691891	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCGCATTGGTGTCATAT	161216001	True	NA	31	True	AATAAA	-32	NA	161221310	161252307	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_161221410_161221993_161222058_161224929_161225065_161227246_161227344_161233398_161233480_161234726_161234856_161235121_161235213_161238112_161238192_161238729_161238827_161241045_161241164_161242507_161242654_161246335_161246449_161247257_161247331_161249453_161249561_161250255_161250327_161250779
transcript_149700.nic	chr3	+	3036	16	NIC	ENSG00000169251.13	novel	3061	15	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	95.4571224279374	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACTGTGTGGAACATTT	161216005	True	NA	8	True	AATAAA	-14	NA	161221314	161252004	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_161221725_161221993_161222058_161224929_161225065_161227246_161227344_161233398_161233480_161234726_161234856_161235121_161235213_161238112_161238192_161238729_161238827_161241045_161241164_161242507_161242654_161246335_161246449_161247257_161247331_161249453_161249561_161250255_161250327_161250779
transcript_149701.nic	chr3	+	3339	16	NIC	ENSG00000169251.13	novel	3028	16	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	95.4571224279374	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCGCATTGGTGTCATAT	161216005	True	NA	31	True	AATAAA	-32	NA	161221314	161252307	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_161221725_161221993_161222058_161224929_161225065_161227246_161227344_161233398_161233480_161234726_161234856_161235121_161235213_161238112_161238192_161238729_161238827_161241045_161241164_161242507_161242654_161246335_161246449_161247257_161247331_161249453_161249561_161250255_161250327_161250779
transcript_149713.known	chr3	+	685	6	FSM	ENSG00000169251.13	ENST00000476237.5	685	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	166.061916163821	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAATGAGAGAAGATGATGA	161221515	False	NA	NA	False	NA	NA	NA	161221556	161234855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_161221736_161221993_161222058_161224929_161225065_161227246_161227344_161233398_161233480_161234726
transcript_149714.known	chr3	-	552	6	FSM	ENSG00000169255.15	ENST00000484127.5	552	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	19.4668949758301	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGATAGAACGCGTGAAC	-161104742	False	NA	NA	False	NA	NA	NA	161105261	161086630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_161086789_161101138_161101234_161103112_161103206_161103426_161103518_161104318_161104407_161105234
transcript_149716.known	chr3	-	1660	5	FSM	ENSG00000169255.15	ENST00000488170.5	1660	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	14.8744747806435	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCACATTCTACAAAAAGC	-161104621	False	NA	NA	False	NA	NA	NA	161105140	161085758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_161086789_161101138_161101234_161103426_161103518_161104318_161104407_161104784
transcript_149717.known	chr3	-	3295	5	FSM	ENSG00000169255.15	ENST00000320474.10	3295	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	6.37867541108654	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGTGTTCTATTCCTAC	-161104830	True	NA	0	True	AATAAA	-32	NA	161105349	161083882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_161086789_161101138_161101234_161103426_161103518_161104318_161104407_161105234
transcript_149721.known	chr3	-	880	4	FSM	ENSG00000196542.9	ENST00000497137.1	880	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	46.5784881201135	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTAACAGACCTACCAGAA	-161371485	False	NA	NA	False	AATAGA	-2	NA	161371501	161345774	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_161346356_161347964_161348104_161359801_161359895_161371434
transcript_149722.known	chr3	-	3103	3	FSM	ENSG00000196542.9	ENST00000359175.9	3094	3	0	-9	0	6	multi-exon	FALSE	canonical	0	0	junction_1	51.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAGATTTACTTTTTAT	-161372835	True	NA	NA	False	AATAAA	-25	NA	161372880	161344791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_161346356_161359801_161359895_161371434
transcript_149723.known	chr3	-	679	2	FSM	ENSG00000196542.9	ENST00000497374.1	679	2	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAATAAGCATTTAATTA	-161371501	False	NA	NA	False	AATATA	-3	NA	161371517	161359298	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_161359895_161371434
transcript_149724.known	chr3	-	471	1	FSM	ENSG00000234851.4	ENST00000471152.1	471	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGTCCAGCTGCCTAAT	-161429557	True	NA	-66	True	NA	NA	NA	161429597	161429126	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_161429100_161429600
transcript_149725.known	chr3	-	4937	2	FSM	ENSG00000121871.4	ENST00000475390.2	4937	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATTATATATAGAGGATA	-165196368	False	NA	NA	False	AATAAA	-20	NA	165196384	165186719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_165190852_165195579
transcript_149726.known	chr3	-	4391	2	FSM	ENSG00000121871.4	ENST00000241274.3	4391	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATACATTATATATAGAGGA	-165196836	False	NA	NA	False	AATAAA	-18	NA	165196852	165186721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_165190852_165196591
transcript_149730.known	chr3	-	2405	4	FSM	ENSG00000114200.10	ENST00000264381.8	2405	4	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_1	3.74165738677394	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTCTTTGTTTTTTAT	-165837213	True	NA	NA	False	ATTAAA	-18	NA	165837423	165772903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_165773507_165786144_165786312_165829516_165831042_165837313
transcript_149736.known	chr3	-	849	9	FSM	ENSG00000114209.15	ENST00000475915.6	849	9	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_8	555.484346651641	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACTTCAGACCTTCAAAA	-167734467	False	NA	NA	False	AATAAA	-43	NA	167734510	167684338	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_167684390_167687233_167687317_167687614_167687694_167695595_167695723_167697008_167697127_167704841_167704896_167720061_167720274_167725400_167725474_167734458
transcript_149737.known	chr3	-	1360	9	FSM	ENSG00000114209.15	ENST00000473645.6	1360	9	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_8	471.3283754454	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACATTTCTTTACTTGAA	-167734896	False	NA	-10	True	AATAAA	-15	NA	167734939	167683909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_167684390_167687233_167687317_167687614_167687694_167695595_167695723_167697008_167697127_167704841_167704896_167720061_167720274_167725400_167725474_167734805
transcript_149738.known	chr3	-	1026	9	FSM	ENSG00000114209.15	ENST00000470131.5	1026	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_8	611.938671355227	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTGTAAATTTTAAAGTT	-167719863	True	NA	NA	False	NA	NA	NA	167734892	167684255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_167684390_167687233_167687317_167687614_167687694_167695595_167695723_167697008_167697127_167704841_167704896_167720061_167720274_167734213_167734346_167734805
transcript_149740.known	chr3	-	934	8	FSM	ENSG00000114209.15	ENST00000461494.5	934	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	505.19634493806	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTTGACTGTATAAATT	-167734501	False	NA	NA	False	NA	NA	NA	167734544	167684241	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_167684390_167687233_167687317_167687614_167687694_167695595_167695723_167697008_167697127_167704841_167704896_167720061_167720274_167734431
transcript_149742.known	chr3	-	1276	8	FSM	ENSG00000114209.15	ENST00000497056.6	1276	8	0	0	0	0	multi-exon	FALSE	canonical	3	1176	junction_7	124.925120429342	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAACATTTCTTTACTTG	-167734887	False	NA	-12	True	AATAAA	-13	NA	167734930	167683911	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_167684390_167687233_167687317_167687614_167687694_167695595_167695723_167697008_167697127_167704841_167704896_167720061_167720274_167734805
transcript_149744.known	chr3	-	716	7	FSM	ENSG00000114209.15	ENST00000487947.6	716	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_6	537.683534556651	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTACTTTTAAAATTAAAT	-167734439	False	15029	NA	False	TTTAAA	-28	NA	167734482	167687214	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_167687317_167687614_167687694_167695595_167695723_167697008_167697127_167704841_167704896_167720061_167720274_167734458
transcript_149750.known	chr3	-	674	3	FSM	ENSG00000114209.15	ENST00000481136.1	674	3	0	0	0	0	multi-exon	FALSE	canonical	3	1176	junction_2	203.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTATTTGACCTTTTGA	-167734886	False	NA	NA	False	NA	NA	NA	167734929	167704557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_167704896_167720061_167720274_167734805
transcript_149751.known	chr3	+	1600	9	FSM	ENSG00000163536.13	ENST00000446050.7	1600	9	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_6	7.51560875777871	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGATCTATTTTTTTATTT	167735037	True	NA	20	True	AATAAA	-21	NA	167735720	167825569	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_167735824_167789110_167789379_167790371_167790603_167792589_167792785_167794619_167794825_167807243_167807342_167822985_167823073_167824472_167824563_167825246
transcript_149752.known	chr3	+	1907	9	FSM	ENSG00000163536.13	ENST00000295777.9	1907	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	18.4386652174174	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTAGATCTATTTTTTTA	167735039	True	NA	17	True	AATAAA	-18	NA	167735722	167825566	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_167736136_167789110_167789379_167790371_167790603_167792589_167792785_167794619_167794825_167807243_167807342_167822985_167823073_167824472_167824563_167825246
transcript_149753.known	chr3	-	2100	15	FSM	ENSG00000173905.9	ENST00000309027.4	2100	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	3.8998953413482	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTTTTCAAGCTGCTCA	-168095288	False	NA	NA	False	NA	NA	NA	168095344	168010234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_168010419_168010742_168010824_168024525_168024595_168024927_168025096_168027727_168027838_168029222_168029303_168029779_168030037_168032519_168032853_168036835_168036995_168041391_168041475_168043378_168043530_168044827_168044882_168046949_168047000_168048290_168048366_168095098
transcript_149758.nic	chr3	-	916	2	ISM	ENSG00000173905.9	ENST00000309027.4	2100	15	-622	38083	-42	-7200	5prime_fragment	FALSE	canonical	3	9	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACTTGAACATAAAAAAGCA	-168095910	False	NA	NA	False	AAAAAG	-4	NA	168095966	168048317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_168048366_168095098
transcript_149759.known	chr3	-	4310	16	FSM	ENSG00000173905.9	ENST00000470487.6	4310	16	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	3.32398689661811	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGCAAATCTTTTAAACTA	-168094130	True	NA	-20	True	AATAAA	-15	NA	168095924	168008688	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_168010419_168010742_168010824_168024525_168024595_168024927_168025096_168027727_168027838_168029222_168029303_168029779_168030037_168032519_168032853_168036835_168036995_168040785_168040870_168041391_168041475_168043378_168043530_168044827_168044882_168046949_168047000_168048290_168048366_168095098
transcript_149762.known	chr3	-	5732	15	FSM	ENSG00000085276.19	ENST00000464456.5	5732	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_14	6.02206825953085	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTTTCCCCACTGTGTG	NA	False	NA	-9	True	AATAAA	-16	NA	169147734	169083506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_169085044_169088999_169089184_169089999_169090237_169092957_169093103_169095075_169095246_169100884_169100963_169102059_169102227_169112786_169112875_169115382_169116740_169121055_169121210_169122579_169122728_169127843_169128061_169131428_169131532_169143697_169143833_169146722
transcript_149763.known	chr3	-	438	1	FSM	ENSG00000277925.1	ENST00000363312.1	438	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCGCTTTCCTGTTGGTG	-169759762	True	NA	-4	True	NA	NA	NA	169765047	169764609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_169764600_169765000
transcript_149764.known	chr3	-	1671	2	FSM	ENSG00000184378.3	ENST00000330368.3	1671	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTTATGTATGTATT	-169769316	True	NA	-12	True	AATAGA	-19	NA	169769561	169766920	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_169768351_169769320
transcript_149772.known	chr3	+	2833	9	FSM	ENSG00000085274.16	ENST00000356716.8	2833	9	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	75.7585597473975	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAAGAATTTTCTAGATA	169771450	True	NA	0	True	AATAAA	-11	NA	169773426	169787544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_169773463_169774030_169774098_169774264_169774562_169778767_169779562_169780589_169780750_169782464_169782644_169783476_169783561_169784621_169784709_169786415
transcript_149780.nic	chr3	+	2320	8	ISM	ENSG00000085274.16	ENST00000356716.8	2833	9	-659	2879	-628	-11	5prime_fragment	FALSE	canonical	3	73	junction_1	75.7571307346236	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATATTAAAAATTTAAAGAA	169772732	False	NA	NA	False	NA	NA	NA	169772767	169784665	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_169773463_169774030_169774098_169774264_169774562_169778767_169779562_169780589_169780750_169782464_169782644_169783476_169783561_169784621
transcript_149784.known	chr3	+	4969	8	FSM	ENSG00000085274.16	ENST00000349841.10	4969	8	0	0	0	0	multi-exon	TRUE	canonical	3	126	junction_1	53.3819506299763	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGCCCACCTCAGCCTC	169771419	True	NA	NA	False	NA	NA	NA	169773395	169789716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_169773463_169774264_169774562_169778767_169779562_169780589_169780750_169782464_169782644_169783476_169783561_169784621_169784709_169786415
transcript_149788.known	chr3	+	2630	8	FSM	ENSG00000085274.16	ENST00000602751.5	2630	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	83.1794224945726	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTACTCCTGTTATGCACT	169771428	True	NA	-42	True	NA	NA	NA	169773404	169787502	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_169773463_169774264_169774562_169778883_169779562_169780589_169780750_169782464_169782644_169783476_169783561_169784621_169784709_169786415
transcript_149802.known	chr3	-	1475	9	FSM	ENSG00000171757.17	ENST00000522080.5	1475	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_8	6.24374687187109	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGATCTAATTAGAAAACTAA	-169812169	False	NA	NA	False	TATAAA	-45	NA	169812525	169795779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_169796370_169796744_169796900_169800658_169800755_169804052_169804182_169806847_169806932_169807425_169807491_169807587_169807710_169808627_169808746_169812409
transcript_149803.known	chr3	-	3787	9	FSM	ENSG00000171757.17	ENST00000522596.6	3787	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_8	8.70972875582242	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGTAGGGTAATTTTTTA	-169812334	False	356	5	True	ATTAAA	-28	NA	169812690	169793472	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_169796370_169796744_169796900_169800658_169800755_169804052_169804182_169806847_169806932_169807425_169807491_169807587_169807710_169808627_169808746_169812569
transcript_149805.known	chr3	+	6526	8	FSM	ENSG00000008952.17	ENST00000337002.9	6526	8	0	0	0	0	multi-exon	FALSE	canonical	3	934	junction_4	197.339963576793	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTATTTATTTTATGTAT	169952885	True	NA	6	True	AATAAA	-22	NA	169966806	169998373	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_169966859_169975607_169975717_169976945_169977052_169982706_169982912_169983160_169983254_169985804_169985866_169988239_169988360_169992593
transcript_149812.known	chr3	+	508	5	FSM	ENSG00000008952.17	ENST00000487736.5	508	5	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	726.11466036708	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAAAAGAAAAAGAGAA	169952892	True	NA	65	True	TATAAA	-11	NA	169966813	169982857	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_169966859_169969286_169969384_169975607_169975717_169976945_169977052_169982706
transcript_149815.nic	chr3	+	375	4	ISM	ENSG00000008952.17	ENST00000481435.5	627	6	-48	3100	-23	-72	5prime_fragment	FALSE	canonical	3	1345	junction_3	98.8005847935909	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATAAAGGAAAAGCTGAAAG	169952856	True	NA	-7	True	CATAAA	-11	NA	169966777	169982785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_169966859_169975607_169975717_169976945_169977052_169982706
transcript_149816.nic	chr3	+	449	4	ISM	ENSG00000008952.17	ENST00000481435.5	627	6	-48	3026	-23	0	5prime_fragment	FALSE	canonical	3	1345	junction_3	98.8005847935909	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAGAGAAAA	169952856	True	NA	67	True	TATAAA	-13	NA	169966777	169982859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_169966859_169975607_169975717_169976945_169977052_169982706
transcript_149817.known	chr3	-	1738	2	FSM	ENSG00000239219.2	ENST00000469301.1	1738	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGTTTTCCAGTTATTT	-169966696	True	NA	NA	False	AATAAA	-18	NA	169966734	169954226	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_169955208_169965977
transcript_149818.known	chr3	+	641	5	FSM	ENSG00000008952.17	ENST00000460513.5	641	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	610.023565118594	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGAGTAAGCCTATAACT	169952879	True	NA	NA	False	NA	NA	NA	169966800	169983253	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_169966859_169975607_169975717_169976945_169977052_169982636_169982912_169983160
transcript_14982.known	chr1	+	3838	8	FSM	ENSG00000143630.10	ENST00000368358.4	3838	8	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	7.18558647997674	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGCTCTTGGTTTGTG	NA	False	NA	NA	False	TATAAA	-14	NA	155277462	155289848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155277869_155282410_155282841_155283973_155284136_155284538_155284758_155285164_155285312_155285723_155285965_155287172_155287338_155287780
transcript_149821.known	chr3	+	1299	5	FSM	ENSG00000173890.17	ENST00000492492.5	1299	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	211.066340281912	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAAAATATTATTAAATAT	170033726	True	NA	NA	False	NA	NA	NA	170038137	170084071	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_170038216_170038914_170039044_170077122_170077924_170079773_170079898_170083904
transcript_149822.known	chr3	+	1962	4	FSM	ENSG00000173890.17	ENST00000355897.10	1962	4	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_1	59.3820025110489	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGTAAAAATTGTTCTTA	170037096	True	NA	5	True	ATTAAA	-18	NA	170037994	170085392	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_170038216_170038914_170039044_170079773_170079898_170083904
transcript_149824.known	chr3	+	865	3	FSM	ENSG00000173890.17	ENST00000482813.5	865	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	178	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTTACATTCTAGTTGT	170033787	True	NA	NA	False	NA	NA	NA	170038198	170063151	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_170038216_170038914_170039044_170062432
transcript_149825.known	chr3	-	5030	15	FSM	ENSG00000173889.16	ENST00000494943.5	5030	15	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_14	11.1833057067493	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACTCTATAATGAGTTTT	-170179440	True	NA	-10	True	ATTAAA	-17	NA	170181733	170095220	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_170097385_170102478_170102711_170102801_170102935_170106831_170106947_170113359_170113520_170117225_170117477_170122590_170122745_170128683_170129553_170136418_170136666_170145422_170145522_170149085_170149245_170171372_170171451_170172556_170172713_170178772_170178939_170181686
transcript_149832.known	chr3	+	4887	18	FSM	ENSG00000163558.13	ENST00000295797.5	4887	18	0	0	0	0	multi-exon	FALSE	canonical	3	793	junction_14	59.8813706148482	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGAGTGGATCATTTTTC	170209102	True	NA	54	True	AATAAA	-15	NA	170222423	170305977	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_170222771_170235229_170235352_170259968_170260059_170263378_170263430_170267914_170268001_170270420_170270562_170273285_170273341_170275228_170275288_170280226_170280404_170281165_170281264_170281881_170281969_170284460_170284597_170291853_170291942_170293382_170293509_170295910_170295991_170297303_170297394_170298994_170299111_170303039
transcript_149863.known	chr3	+	7155	7	FSM	ENSG00000136603.14	ENST00000259119.9	7155	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	80.2987477417232	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATTCAAGTTATTTCAG	170346520	True	NA	19	True	AATAAA	-21	NA	170357714	170396835	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_170357764_170359698_170361430_170381243_170381342_170384532_170384766_170390222_170390465_170391035_170391261_170392258
transcript_149867.nic	chr3	+	2914	6	ISM	ENSG00000136603.14	ENST00000259119.9	7155	7	-409	5648	-372	0	5prime_fragment	FALSE	canonical	0	0	junction_2	83.521494239507	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAGATAATGAAGCAAAAAT	170356861	True	NA	-13	True	NA	NA	NA	170357305	170391187	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_170357764_170359698_170361430_170381243_170381342_170384532_170384766_170390222_170390465_170391035
transcript_149870.nic	chr3	+	2553	5	ISM	ENSG00000136603.14	ENST00000259119.9	7155	7	-409	6580	-372	-932	5prime_fragment	FALSE	canonical	0	0	junction_2	91.7997140518422	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATCTGAGTCTGCCACT	170356861	True	NA	NA	False	AGTAAA	-2	NA	170357305	170390255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_170357764_170359698_170361430_170381243_170381342_170384532_170384766_170390222
transcript_149871.nic	chr3	+	2711	5	ISM	ENSG00000136603.14	ENST00000259119.9	7155	7	-409	6422	-372	-774	5prime_fragment	FALSE	canonical	0	0	junction_2	91.7997140518422	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACAGGAAAAACTAAACTT	170356861	True	NA	NA	False	TTTAAA	-2	NA	170357305	170390413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_170357764_170359698_170361430_170381243_170381342_170384532_170384766_170390222
transcript_149875.known	chr3	+	599	2	FSM	ENSG00000136603.14	ENST00000490989.1	599	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAACCAAAACTAAGTCGC	170355851	True	NA	NA	False	NA	NA	NA	170358508	170360160	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_170358646_170359698
transcript_149877.known	chr3	+	594	2	FSM	ENSG00000136603.14	ENST00000465590.1	594	2	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGAGAGTAAGTTACG	170346490	True	NA	NA	False	GGGGCT	-11	NA	170357684	170360213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_170357764_170359698
transcript_149882.known	chr3	+	2758	3	FSM	ENSG00000013297.12	ENST00000064724.8	2758	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTAATTGGCAAACATTTC	170418322	True	NA	NA	False	AATAAA	-26	NA	170418867	170434691	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_170419293_170423162_170423328_170432523
transcript_149883.known	chr3	-	506	4	FSM	ENSG00000163584.18	ENST00000463836.1	506	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	438.221658778092	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTTTTGTCTCATTTTT	-170861611	True	NA	-17	True	AATAAA	-15	NA	170870195	170866267	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_170866525_170868012_170868135_170868297_170868388_170870158
transcript_149884.known	chr3	-	587	4	FSM	ENSG00000163584.18	ENST00000494771.5	587	4	0	0	0	0	multi-exon	TRUE	canonical	3	62	junction_3	473.360562597078	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTTGTCTCATTTTTT	-170861624	True	NA	-16	True	AATAAA	-16	NA	170870208	170866266	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_170866525_170868012_170868202_170868297_170868388_170870158
transcript_149887.known	chr3	-	5534	5	FSM	ENSG00000163577.8	ENST00000295822.7	5534	5	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_4	11.5542200082913	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTCTTGTACATATACAT	-170907750	True	NA	NA	False	AATAAA	-19	NA	170908637	170888417	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_170893420_170894291_170894424_170906988_170907094_170907641_170907842_170908542
transcript_149888.known	chr3	-	3996	32	FSM	ENSG00000154310.17	ENST00000357327.9	3996	32	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_13	31.5591379531424	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGAGCACTTGGCACTT	-171460046	False	NA	NA	False	NA	NA	NA	171460063	171063880	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_171063965_171066186_171066327_171066575_171066736_171068847_171068998_171071222_171071324_171079517_171079653_171082250_171082395_171084154_171084326_171085117_171085230_171087341_171087507_171093838_171093969_171101448_171101634_171107182_171107207_171108064_171108163_171110713_171110878_171123595_171123703_171125911_171126152_171128713_171128879_171138190_171138380_171140398_171140510_171157459_171157665_171161269_171161337_171167094_171167271_171175251_171175331_171177325_171177381_171188701_171188833_171190696_171190788_171194524_171194636_171211115_171211242_171228164_171228222_171369619_171369686_171460006
transcript_149890.known	chr3	-	3972	31	FSM	ENSG00000154310.17	ENST00000470834.5	3972	31	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_12	24.9007139567434	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGAGCACTTGGCACTT	-171460046	False	NA	NA	False	NA	NA	NA	171460063	171063880	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_171063965_171066186_171066327_171066575_171066736_171068847_171068998_171071222_171071324_171079517_171079653_171082250_171082395_171084154_171084326_171085117_171085230_171087341_171087507_171093838_171093969_171101448_171101634_171108064_171108163_171110713_171110878_171123595_171123703_171125911_171126152_171128713_171128879_171138190_171138380_171140398_171140510_171157459_171157665_171161269_171161337_171167094_171167271_171175251_171175331_171177325_171177381_171188701_171188833_171190696_171190788_171194524_171194636_171211115_171211242_171228164_171228222_171369619_171369686_171460006
transcript_149900.nic	chr3	-	1368	10	ISM	ENSG00000154310.17	ENST00000284483.12	4059	32	-439	103234	-94	-9564	5prime_fragment	FALSE	canonical	3	103	junction_1	11.4406682011537	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGCGAGGAGAAAAAG	-171458061	True	NA	-14	True	NA	NA	NA	171460502	171167114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_171167271_171175251_171175331_171177325_171177381_171188701_171188833_171190696_171190788_171194524_171194636_171211115_171211242_171228164_171228222_171369619_171369686_171460006
transcript_149902.nic	chr3	-	547	3	ISM	ENSG00000154310.17	ENST00000284483.12	4059	32	-366	164283	-21	-70613	5prime_fragment	FALSE	canonical	3	135	junction_2	2.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGTCTTTATTTTGCCA	-171457988	True	NA	NA	False	NA	NA	NA	171460429	171228163	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_171228222_171369619_171369686_171460006
transcript_149905.known	chr3	-	750	3	FSM	ENSG00000154310.17	ENST00000465393.1	750	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	63.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCTCTCCTGTTTAAAA	-171457964	True	NA	-15	True	ATTAAA	-16	NA	171460405	171346933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_171347219_171369619_171369686_171460006
transcript_149906.nic	chr3	-	1249	2	ISM	ENSG00000154310.17	ENST00000465393.1	750	3	-97	21999	-94	-21999	5prime_fragment	FALSE	canonical	3	135	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGTGAACTGTTTTTGG	-171458061	True	NA	NA	False	AAAACA	-8	NA	171460502	171368932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_171369686_171460006
transcript_149910.known	chr3	-	5855	26	FSM	ENSG00000075651.17	ENST00000356327.9	5855	26	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_25	2.89108975993482	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCCTGCTAATTTCTGTA	-171810315	True	NA	NA	False	TATAAA	-14	NA	171810438	171600404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_171603303_171605298_171605417_171612278_171612433_171620385_171620521_171642839_171642890_171644909_171645024_171659212_171659302_171662059_171662171_171674499_171674614_171676714_171676834_171677565_171677695_171687370_171687585_171688675_171688877_171692331_171692443_171699744_171699827_171708754_171708839_171709559_171709710_171713892_171714046_171724695_171724789_171726017_171726077_171733443_171733510_171734864_171734971_171735491_171735638_171737531_171737660_171737891_171738083_171810398
transcript_149911.known	chr3	+	8031	26	FSM	ENSG00000075420.13	ENST00000415807.7	8031	26	0	0	0	0	multi-exon	TRUE	canonical	3	100	junction_6	14.0852263027613	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTTGTGATTTTAGA	172034743	True	NA	NA	False	AATAAA	-22	NA	172039577	172401669	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_172039772_172112451_172112591_172133470_172133547_172226870_172226948_172247532_172247777_172251259_172251542_172285925_172285985_172295362_172295515_172298727_172298788_172307362_172307502_172310827_172310882_172328951_172329077_172330540_172330716_172333088_172333176_172334943_172335083_172337329_172337402_172341112_172341232_172343010_172343117_172344085_172344259_172346326_172346441_172347211_172347362_172352802_172353084_172362632_172362846_172378269_172378437_172380965_172381094_172397163
transcript_149912.known	chr3	+	7904	26	FSM	ENSG00000075420.13	ENST00000336824.8	7904	26	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	23.4781941383915	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCATGGTTTTGTGATTT	172039863	True	NA	NA	False	AATAAA	-18	NA	172040553	172401665	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_172040625_172112451_172112591_172133470_172133547_172226870_172226948_172247532_172247777_172251259_172251542_172285925_172285985_172295362_172295515_172298727_172298788_172307362_172307502_172310827_172310882_172328951_172329077_172330540_172330716_172333088_172333176_172334943_172335083_172337329_172337402_172341112_172341232_172343010_172343117_172344085_172344259_172346326_172346441_172347211_172347362_172352802_172353084_172362632_172362846_172378269_172378437_172380965_172381094_172397163
transcript_149916.known	chr3	+	946	4	FSM	ENSG00000075420.13	ENST00000421757.5	946	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	51.6483838619908	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGACCTCTTCTTATTCAT	172034793	True	NA	NA	False	AATAAA	-27	NA	172039627	172187298	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_172039772_172112451_172112591_172133470_172133547_172186711
transcript_149917.known	chr3	+	2916	16	FSM	ENSG00000075420.13	ENST00000469491.5	2916	16	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_6	13.8749974974973	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATTCTTATAAGC	172034824	True	NA	NA	False	NA	NA	NA	172039658	172338324	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_172039772_172112451_172112591_172133470_172133547_172226870_172226948_172247532_172247777_172251259_172251542_172285925_172285985_172295362_172295515_172298727_172298788_172307362_172307502_172310827_172310882_172328951_172329077_172330540_172330716_172333088_172333176_172334943_172335083_172337329
transcript_149918.known	chr3	-	4536	5	FSM	ENSG00000144959.11	ENST00000475381.7	4536	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	5.49431524395898	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATTATGCTTAGTTTAT	-172710661	True	NA	NA	False	AATAAA	-18	NA	172711067	172630248	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_172634093_172635915_172636088_172645622_172645693_172647885_172648115_172710846
transcript_149921.known	chr3	-	602	4	FSM	ENSG00000144959.11	ENST00000421723.2	602	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	14.8398861930347	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAAAATGTGAACACCCCA	-172710706	False	NA	NA	False	NA	NA	NA	172711112	172633998	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_172634093_172635915_172636088_172645622_172645693_172710846
transcript_149924.nic	chr3	+	4443	26	NIC	ENSG00000114346.14	novel	4136	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_25	116.390405102826	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATGTCTCATGTATTA	172736363	True	NA	17	True	AATAAA	-19	NA	172750684	172821473	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_172750858_172754508_172754661_172755294_172755375_172755482_172755576_172756982_172757166_172758979_172759070_172760155_172760264_172761609_172761684_172762415_172762547_172762690_172762807_172762909_172762973_172764277_172764501_172769006_172769144_172773902_172774023_172782162_172782232_172783798_172783910_172784706_172784804_172786492_172786575_172802615_172802695_172802860_172802981_172805730_172805870_172807769_172807925_172815603_172815712_172816690_172816838_172818547_172818815_172820147
transcript_149932.known	chr3	+	4136	25	FSM	ENSG00000114346.14	ENST00000392692.8	4136	25	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_4	49.0439145619062	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGTCTCATGTATTAA	172736404	True	NA	18	True	AATAAA	-20	NA	172750725	172821474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_172750858_172754508_172754661_172755294_172755375_172755482_172755576_172756982_172757166_172758979_172759070_172760155_172760264_172761609_172761684_172762415_172762547_172762690_172762807_172762909_172762973_172764277_172764501_172769006_172769144_172773902_172774023_172782162_172782232_172783798_172783910_172784706_172784804_172786492_172786575_172802615_172802695_172802860_172802981_172805730_172805870_172807769_172807925_172815603_172815712_172816690_172816838_172820147
transcript_149935.known	chr3	+	4363	25	FSM	ENSG00000114346.14	ENST00000417960.5	4363	25	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_3	153.463599556667	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGTCTCATGTATTAA	172736404	True	NA	18	True	AATAAA	-20	NA	172750725	172821474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_172750858_172752149_172752473_172754508_172754661_172755297_172755375_172756982_172757166_172758979_172759070_172760155_172760264_172761609_172761684_172762415_172762547_172762690_172762807_172762909_172762973_172764277_172764501_172769006_172769144_172773902_172774023_172782162_172782232_172783798_172783910_172784706_172784804_172786492_172786575_172802615_172802695_172802860_172802981_172805730_172805870_172807769_172807925_172815603_172815712_172816690_172816838_172820147
transcript_149938.known	chr3	+	4087	24	FSM	ENSG00000114346.14	ENST00000232458.9	4087	24	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	82.8753590747994	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGTCTCATGTATTAA	172736360	True	NA	18	True	AATAAA	-20	NA	172750681	172821474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_172750858_172754508_172754661_172755294_172755375_172756982_172757166_172758979_172759070_172760155_172760264_172761609_172761684_172762415_172762547_172762690_172762807_172762909_172762973_172764277_172764501_172769006_172769144_172773902_172774023_172782162_172782232_172783798_172783910_172784706_172784804_172786492_172786575_172802615_172802695_172802860_172802981_172805730_172805870_172807769_172807925_172815603_172815712_172816690_172816838_172820147
transcript_149941.nic	chr3	+	2690	23	ISM	ENSG00000114346.14	ENST00000392692.8	4136	25	-41	5776	0	-4593	5prime_fragment	FALSE	canonical	3	327	junction_4	46.6589746710681	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTCAAAAAAGGTGAGTT	172736363	True	NA	NA	False	AATAAA	-4	NA	172750684	172815698	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_172750858_172754508_172754661_172755294_172755375_172755482_172755576_172756982_172757166_172758979_172759070_172760155_172760264_172761609_172761684_172762415_172762547_172762690_172762807_172762909_172762973_172764277_172764501_172769006_172769144_172773902_172774023_172782162_172782232_172783798_172783910_172784706_172784804_172786492_172786575_172802615_172802695_172802860_172802981_172805730_172805870_172807769_172807925_172815603
transcript_149945.known	chr3	+	4406	25	FSM	ENSG00000114346.14	ENST00000540509.5	4406	25	0	0	0	0	multi-exon	TRUE	canonical	3	26	junction_2	134.32020200501	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATGTCTCATGTATTA	172736363	True	NA	17	True	AATAAA	-19	NA	172750684	172821473	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_172750858_172752149_172752473_172754508_172754661_172755294_172755375_172756982_172757166_172758979_172759070_172760155_172760264_172761609_172761684_172762415_172762547_172762690_172762807_172762909_172762973_172764277_172764501_172769006_172769144_172773902_172774023_172782162_172782232_172783798_172783910_172784706_172784804_172786492_172786575_172802615_172802695_172802860_172802981_172805730_172805870_172807769_172807925_172815603_172815712_172816690_172816838_172820147
transcript_149953.nic	chr3	+	759	5	NIC	ENSG00000114346.14	novel	734	6	NA	NA	12	940	combination_of_known_junctions	FALSE	canonical	3	26	junction_2	171.025400160327	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTCCTGGAAAATCGGAT	172736375	True	NA	NA	False	ATTAAA	-35	NA	172750696	172755525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_172750858_172752149_172752473_172754508_172754661_172755294_172755375_172755482
transcript_149954.nic	chr3	+	448	4	ISM	ENSG00000114346.14	ENST00000392692.8	4136	25	-41	65949	0	940	5prime_fragment	FALSE	canonical	3	333	junction_3	41.5076967427595	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTCCTGGAAAATCGGAT	172736363	True	NA	NA	False	ATTAAA	-35	NA	172750684	172755525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_172750858_172754508_172754661_172755294_172755375_172755482
transcript_149958.known	chr3	-	440	1	FSM	ENSG00000214192.3	ENST00000397758.2	440	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACTAATCAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-43	NA	175718670	175718230	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_175718200_175718700
transcript_149959.known	chr3	-	2109	1	FSM	ENSG00000260217.1	ENST00000562617.1	2109	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTACCACTTTATGTGT	NA	False	NA	NA	False	AATAAA	-32	NA	175941037	175938928	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_175938900_175941000
transcript_149961.known	chr3	-	2535	17	FSM	ENSG00000177565.18	ENST00000422442.6	2535	17	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_15	77.9350691280889	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGCATGTTGTGGAAGGG	-177194313	True	NA	-124	True	NA	NA	NA	177197227	177024854	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_177025525_177026372_177026475_177032970_177033137_177034197_177034326_177038097_177038173_177038312_177038435_177046128_177046190_177047299_177047398_177047485_177047550_177049996_177050139_177050477_177050611_177051503_177051727_177053772_177053919_177064919_177065023_177079826_177079946_177098465_177098542_177197120
transcript_149966.known	chr3	-	7948	16	FSM	ENSG00000177565.18	ENST00000430069.5	7948	16	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_15	58.0861429258304	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGACAATTACTAATGTTT	-177196454	False	2914	-10	True	ATTAAA	-24	NA	177196478	177019354	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_177025525_177026372_177026475_177032970_177033137_177034197_177034326_177038097_177038173_177038312_177038435_177046128_177046190_177047299_177047398_177047485_177047550_177049996_177050139_177050477_177050611_177051503_177051727_177053772_177053919_177064919_177065023_177098465_177098542_177196339
transcript_149967.known	chr3	-	8182	16	FSM	ENSG00000177565.18	ENST00000457928.7	8182	16	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_15	46.5403051128804	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAATGTTTCTTGGTTGTTG	-177197160	True	NA	1	True	ATTAAA	-35	NA	177197482	177019343	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_177025525_177026372_177026475_177032970_177033137_177034197_177034326_177038097_177038173_177038312_177038435_177046128_177046190_177047299_177047398_177047485_177047550_177049996_177050139_177050477_177050611_177051503_177051727_177053772_177053919_177064919_177065023_177098465_177098542_177197120
transcript_149974.known	chr3	-	2454	15	FSM	ENSG00000177565.18	ENST00000352800.10	2454	15	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_14	52.9264506997538	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTATGCTCTGTTGGTTTT	-177197228	False	NA	-35	True	AGTAAA	-5	NA	177197252	177024765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_177025525_177026372_177026475_177032970_177033137_177034197_177034326_177038097_177038173_177038312_177038435_177046128_177046190_177047299_177047398_177047485_177047550_177049996_177050139_177050477_177050611_177051503_177051727_177053772_177053919_177064919_177065023_177197120
transcript_149982.known	chr3	-	844	8	FSM	ENSG00000237978.6	ENST00000451742.5	844	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	34.7169311161348	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGTTTGGAACTTCCTAG	-178859245	True	NA	NA	False	NA	NA	NA	178860349	178746938	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_178747112_178748403_178748486_178749109_178749237_178757079_178757137_178801792_178801935_178841544_178841617_178859488_178859624_178860293
transcript_149990.nnic	chr3	-	582	3	NIC	ENSG00000237978.6	novel	964	8	NA	NA	-61	25	combination_of_known_splicesites	FALSE	canonical	3	103	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAATCTTTGTTTTGTTA	-178859362	True	NA	-5	True	NA	NA	NA	178860466	178748962	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_178749237_178859488_178859624_178860293
transcript_149992.known	chr3	-	2944	7	FSM	ENSG00000172667.11	ENST00000432729.5	2944	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	11.2607972877392	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-179072202	False	NA	NA	False	NA	NA	NA	179072215	179023738	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_179025226_179027422_179027524_179027645_179027813_179030879_179031000_179067482_179067810_179071326_179071448_179071594
transcript_149995.nic	chr3	-	2480	6	ISM	ENSG00000172667.11	ENST00000432729.5	2944	7	611	0	-38	0	intron_retention	FALSE	canonical	3	7	junction_5	10.1980390271856	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-179071591	False	NA	NA	False	NA	NA	NA	179071604	179023738	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_179025226_179027422_179027524_179027645_179027813_179030879_179031000_179067482_179067810_179071326
transcript_149996.known	chr3	-	8936	6	FSM	ENSG00000172667.11	ENST00000311417.7	8936	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	9.77752524926425	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTGGTTATGAGTTGAA	-179069415	True	NA	0	True	AATAAA	-26	NA	179071809	179017222	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_179025229_179027422_179027524_179027645_179027813_179030879_179031000_179067482_179067810_179071594
transcript_15.known	ERCC-00043	+	1007	1	FSM	ERCC-00043A	DQ516787	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	TATAAA	-12	NA	0	1007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00043_+_0_1000
transcript_150000.known	chr3	+	9259	21	FSM	ENSG00000121879.6	ENST00000263967.4	9259	21	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	7.34353457130829	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTGTGTCCAAACAATC	179147953	True	NA	NA	False	ATTAAA	-18	NA	179148356	179240093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_179148604_179198749_179199178_179199689_179199900_179201289_179201541_179203543_179203790_179204502_179204589_179209594_179209701_179210185_179210339_179210430_179210566_179218209_179218335_179219195_179219278_179219570_179219736_179219948_179220053_179220985_179221158_179224080_179224188_179224699_179224822_179225961_179226041_179229271_179229443_179230003_179230122_179230224_179230377_179234093
transcript_150007.known	chr3	+	1228	7	FSM	ENSG00000121864.10	ENST00000491818.5	1228	7	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	70.3524855440248	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGACTTAAAGCAGCATATG	179321526	False	NA	NA	False	TATAAA	-35	NA	179323075	179333613	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_179323292_179325041_179325323_179327560_179327632_179328282_179328352_179329617_179329729_179332988_179333124_179333268
transcript_150012.known	chr3	+	5962	6	FSM	ENSG00000121864.10	ENST00000496856.6	5962	6	0	0	0	0	multi-exon	TRUE	canonical	3	95	junction_1	78.080983600362	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATGACTTAATCCTGGC	179321481	True	NA	8	True	ATTAAA	-17	NA	179323030	179338583	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_179323292_179327560_179327632_179328282_179328352_179329617_179329729_179332988_179333124_179333268
transcript_150015.nic	chr3	+	800	4	ISM	ENSG00000121864.10	ENST00000491818.5	1228	7	-193	5292	-148	-4802	5prime_fragment	FALSE	canonical	3	122	junction_1	63.3456128446688	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGACTCTACACCCTTCT	NA	False	NA	NA	False	AAAAAG	-6	NA	179322882	179328321	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_179323292_179325041_179325323_179327560_179327632_179328282
transcript_150016.nic	chr3	+	761	3	ISM	ENSG00000121864.10	ENST00000491818.5	1228	7	-193	5982	-148	-5492	5prime_fragment	FALSE	canonical	3	122	junction_1	18.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGGACTGTATTGAAA	NA	False	NA	NA	False	NA	NA	NA	179322882	179327631	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_179323292_179325041_179325323_179327560
transcript_150019.known	chr3	+	5212	18	FSM	ENSG00000171109.19	ENST00000471841.6	5212	18	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	13.5557288799654	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATGTAGCATTTATACTA	179346349	True	NA	11	True	AATAAA	-22	NA	179347708	179394936	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_179347811_179348844_179348964_179351899_179352036_179358839_179359003_179362357_179362483_179364296_179364406_179365117_179365226_179367438_179367593_179368035_179368104_179375219_179375342_179377041_179377169_179377343_179377449_179378340_179378444_179378584_179378815_179385568_179385722_179386432_179386630_179390003_179390139_179391980
transcript_150028.known	chr3	-	1173	10	FSM	ENSG00000114450.11	ENST00000674862.1	1173	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	24.0739601136904	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTCATACATATTTGTT	-179447517	True	NA	NA	False	NA	NA	NA	179451470	179401212	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_179401320_179405189_179405407_179413411_179413614_179413714_179413782_179414884_179415048_179416492_179416557_179419398_179419506_179420888_179420928_179426143_179426226_179451345
transcript_150036.known	chr3	+	1854	14	FSM	ENSG00000136518.17	ENST00000429709.7	1854	14	0	0	0	0	multi-exon	FALSE	canonical	3	850	junction_1	70.2105034371597	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGACTGTTGTGCACTG	179548122	True	NA	126	True	AATAAA	-23	NA	179562925	179588407	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_179563118_179569823_179569901_179570066_179570242_179573368_179573470_179574369_179574468_179576216_179576312_179576619_179576727_179576823_179576914_179580639_179580702_179580893_179581009_179581139_179581221_179583352_179583449_179586545_179586633_179587929
transcript_150040.known	chr3	+	1750	14	FSM	ENSG00000136518.17	ENST00000450518.6	1750	14	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	241.709248781973	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGACTGTTGTGCACTG	NA	False	NA	126	True	AATAAA	-23	NA	179562885	179588407	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_179562974_179569823_179569901_179570066_179570242_179573368_179573470_179574369_179574468_179576216_179576312_179576619_179576727_179576823_179576914_179580639_179580702_179580893_179581009_179581139_179581221_179583352_179583449_179586545_179586633_179587929
transcript_150053.known	chr3	-	1126	7	FSM	ENSG00000136522.14	ENST00000259038.6	1126	7	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_6	400.669301156064	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTTAGTCCTTAAAGTA	-179598412	True	NA	-22	True	AATAAA	-31	NA	179604640	179588454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_179588996_179592643_179592740_179593764_179593896_179598674_179598772_179601729_179601791_179602651_179602738_179604526
transcript_150054.known	chr3	-	1354	7	FSM	ENSG00000136522.14	ENST00000476781.6	1354	7	0	0	0	0	multi-exon	FALSE	canonical	3	934	junction_1	111.897894926084	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTTGGAAAGCATTTTA	-179598410	True	NA	24	True	AATAAA	-40	NA	179604638	179588284	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_179588996_179592643_179592740_179593764_179593896_179598674_179598772_179601729_179601791_179602651_179602798_179604526
transcript_150056.known	chr3	-	673	6	FSM	ENSG00000136522.14	ENST00000392659.2	673	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	439.865888652439	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTGTGTACAGGAGTAA	-179598421	True	NA	-1	True	ATTAAA	-24	NA	179604649	179588830	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_179588996_179592643_179592740_179593764_179593896_179598674_179598772_179601729_179601791_179604526
transcript_150059.known	chr3	+	597	3	FSM	ENSG00000136518.17	ENST00000491202.5	597	3	0	0	0	0	multi-exon	FALSE	canonical	3	850	junction_1	8	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAGATGCATAAGAAATG	179548119	True	NA	NA	False	NA	NA	NA	179562922	179570391	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_179563118_179569823_179569901_179570066
transcript_15006.known	chr1	+	1417	11	FSM	ENSG00000160752.15	ENST00000368356.9	1417	11	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	960.212273406251	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGTTCTGTTCTTGCT	155287312	True	NA	27	True	AATAAA	-16	NA	155308865	155320665	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155308966_155309788_155309966_155310042_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
transcript_150065.known	chr3	+	671	7	FSM	ENSG00000136521.13	ENST00000482604.5	671	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	495.951162470213	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATATATTCTGTATTT	179590229	True	NA	-8	True	AATAAA	-3	NA	179604825	179624091	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_179604940_179614970_179615060_179615555_179615616_179615982_179616050_179616982_179617045_179618414_179618522_179623919
transcript_150066.known	chr3	+	1054	6	FSM	ENSG00000136521.13	ENST00000359944.10	1054	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	426.414352478901	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGCTTTCATGGTTTTTT	179590214	True	NA	14	True	AATAAA	-32	NA	179604810	179624500	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_179604940_179614951_179615060_179615982_179616050_179616982_179617045_179618414_179618522_179623919
transcript_150067.known	chr3	+	729	5	FSM	ENSG00000136521.13	ENST00000480374.1	729	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	519.46095859073	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGTAGCAACTTTGAAA	179590244	True	NA	35	True	AATAAA	-32	NA	179604840	179624267	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_179604940_179614951_179615060_179615982_179616050_179618414_179618522_179623919
transcript_150069.known	chr3	+	824	5	FSM	ENSG00000136521.13	ENST00000468210.5	824	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	473.706132533663	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGTAGATGTCTGTATT	179590212	True	NA	144	True	NA	NA	NA	179604808	179624376	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_179604940_179615982_179616050_179616982_179617045_179618414_179618522_179623919
transcript_150070.known	chr3	+	4046	4	FSM	ENSG00000136521.13	ENST00000493866.5	4046	4	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	437.177563722365	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGTCTCTCTGATTCCTTA	179590194	True	NA	10	True	AATAAA	-18	NA	179604790	179627647	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_179604940_179616982_179617045_179618414_179618522_179623919
transcript_150072.known	chr3	+	951	5	FSM	ENSG00000136521.13	ENST00000611971.4	951	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_4	379.954191317848	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATGCTTTCATGGTTTTT	179590190	True	NA	13	True	AATAAA	-31	NA	179604786	179624499	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_179604940_179614970_179615060_179615982_179616050_179616982_179617045_179623919
transcript_150073.known	chr3	+	8038	21	FSM	ENSG00000058056.10	ENST00000263966.8	8038	21	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	15.1508250600421	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGGCCCTTTATGGCTC	179650237	True	NA	11	True	ATTAAA	-15	NA	179653039	179789401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_179653394_179681877_179682004_179690240_179690302_179701007_179701130_179706933_179707077_179708772_179708958_179719939_179720035_179721401_179721590_179730188_179730261_179730615_179730710_179740246_179740373_179742196_179742351_179745042_179745218_179752284_179752374_179754731_179754855_179757051_179757079_179761111_179761256_179764001_179764169_179765694_179765849_179781738_179781824_179784047
transcript_150084.known	chr3	-	9089	15	FSM	ENSG00000114757.19	ENST00000467460.6	9089	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	3.38966014791562	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTTTTAGGGTCTTTT	-180036487	True	NA	NA	False	AATAAA	-15	NA	180036937	179794957	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_179802033_179807673_179807832_179808271_179808438_179809470_179809669_179811800_179811872_179815860_179816005_179819859_179819977_179859061_179859158_179874326_179874424_179875353_179875478_179879928_179880124_179887672_179887785_179898141_179898247_179971593_179971666_180036578
transcript_150086.known	chr3	-	2235	13	FSM	ENSG00000114757.19	ENST00000472994.5	2235	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	3.90156663690654	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCACAAAATGTTGTAT	-180036509	True	NA	NA	False	NA	NA	NA	180036959	179801656	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_179802033_179807673_179807832_179808271_179808438_179809470_179809669_179811800_179811872_179815860_179816005_179819859_179819977_179859061_179859158_179874326_179874424_179875353_179875478_179879928_179880124_179887672_179887785_180036578
transcript_150088.known	chr3	+	3000	12	FSM	ENSG00000163728.11	ENST00000296015.9	3000	12	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_10	12.7064765161136	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCTTCCACCCAGCATAA	180601000	True	NA	NA	False	ATTAAA	-20	NA	180602162	180611130	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_180602423_180602890_180603016_180603123_180603324_180604224_180604310_180604477_180604608_180604851_180605008_180605765_180605838_180606252_180606373_180606480_180606604_180607647_180607766_180608700_180608811_180609629
transcript_15009.known	chr1	+	1478	11	FSM	ENSG00000160752.15	ENST00000356657.10	1478	11	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	969.77719090521	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGTTCTGTTCTTGCT	155287362	True	NA	27	True	AATAAA	-16	NA	155308915	155320665	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155309077_155309788_155309966_155310042_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
transcript_150094.known	chr3	+	4568	10	FSM	ENSG00000163728.11	ENST00000412756.6	4568	10	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_5	9.94428926011753	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTATATGTTCGAATGTTT	180601030	True	NA	NA	False	ATTAAA	-19	NA	180602192	180610974	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_180602423_180602890_180603016_180603123_180603324_180604224_180604310_180604477_180604608_180604851_180605008_180605765_180605838_180606252_180606373_180606480_180606604_180607647
transcript_150099.known	chr3	+	8343	17	FSM	ENSG00000114416.18	ENST00000357559.9	8343	17	0	0	0	0	multi-exon	TRUE	canonical	3	291	junction_15	95.136661571657	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTGATCCTCATTATT	180885710	True	NA	NA	False	AATAAA	-18	NA	180912669	180982753	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_180912737_180933333_180933387_180935137_180935232_180947864_180947937_180948346_180948496_180948720_180948815_180949226_180949344_180951297_180951469_180953761_180953841_180957818_180957929_180961467_180961555_180962882_180962941_180963027_180963091_180968050_180968255_180970157_180970359_180975312_180975405_180976121
transcript_1501.known	chr1	-	1941	6	FSM	ENSG00000157911.11	ENST00000507596.5	1941	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	104.323726927291	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAACTAACTCCAGCAAAAT	-2410255	True	NA	-46	True	NA	NA	NA	2412540	2404837	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_2405829_2406483_2406620_2406719_2406896_2408451_2408859_2410370_2410452_2412390
transcript_150104.known	chr3	+	2651	16	FSM	ENSG00000114416.18	ENST00000445140.6	2651	16	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_15	76.3426195224892	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGAATTTTTTTAACTTT	180885712	True	NA	11	True	AATAAA	-16	NA	180912671	180977155	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_180912737_180933333_180933387_180935137_180935232_180947864_180947937_180948346_180948496_180948720_180948815_180949226_180949344_180951297_180951469_180953761_180953841_180957818_180957929_180961467_180961555_180962882_180962941_180963027_180963091_180968050_180968255_180970157_180970359_180976121
transcript_150113.known	chr3	+	2130	15	FSM	ENSG00000114416.18	ENST00000472339.5	2130	15	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_14	78.7714661381329	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATTTTGTTTTCAAAAT	180885718	True	NA	24	True	ATTAAA	-24	NA	180912677	180976553	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_180912737_180933333_180933387_180935137_180935232_180947864_180947937_180948346_180948496_180948720_180948815_180949226_180949344_180951297_180951469_180953761_180953841_180957818_180957929_180961467_180961555_180962882_180963091_180968050_180968255_180970157_180970359_180976121
transcript_150118.nic	chr3	+	395	5	ISM	ENSG00000114416.18	ENST00000472339.5	2130	15	-16	28106	-8	255	5prime_fragment	FALSE	canonical	3	547	junction_1	25.6758641529355	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTTCTTTAAATGCACAG	180885702	True	NA	NA	False	AATAAA	-15	NA	180912661	180948447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_180912737_180933333_180933387_180935137_180935232_180947864_180947937_180948346
transcript_150119.known	chr3	+	541	4	FSM	ENSG00000114416.18	ENST00000479176.5	541	4	0	0	0	0	multi-exon	FALSE	canonical	3	547	junction_1	29.6010510323911	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAAATCAGATTGATGTAG	180885711	True	NA	NA	False	NA	NA	NA	180912670	180948192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_180912737_180933333_180933387_180935137_180935232_180947864
transcript_150123.known	chr3	+	2920	2	FSM	ENSG00000242808.11	ENST00000647034.2	3006	2	33	53	33	-31	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGTTTAAGATATCAGAAA	181727000	True	NA	NA	False	AATAAA	-40	NA	181727024	181742417	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_181727096_181739568
transcript_150127.known	chr3	-	520	6	FSM	ENSG00000205981.9	ENST00000643241.1	520	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	586.452180488742	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAATGCCTCAGAGCTA	-180967040	True	NA	-67	True	NA	NA	NA	180989714	180984577	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_180984711_180985925_180985997_180986947_180987023_180988022_180988097_180988177_180988230_180989599
transcript_150128.known	chr3	-	828	6	FSM	ENSG00000205981.9	ENST00000486355.1	828	6	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	549.729606261115	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATGATGGAAATTAGCTT	-180967095	True	NA	NA	False	GATAAA	-24	NA	180989769	180984274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_180984711_180985925_180985997_180986997_180987023_180988022_180988097_180988177_180988230_180989599
transcript_150129.known	chr3	-	769	5	FSM	ENSG00000205981.9	ENST00000491873.5	769	5	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_4	608.623652185815	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGTATGATGGAAATTAG	-180967036	True	NA	NA	False	GATAAA	-21	NA	180989710	180984277	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_180984711_180985925_180985997_180986942_180987023_180988022_180988097_180989599
transcript_150131.known	chr3	-	1239	5	FSM	ENSG00000205981.9	ENST00000469657.5	1239	5	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_2	587.577813995729	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTTAATTTGGACTCTT	-180967029	True	NA	-66	True	NA	NA	NA	180989703	180983772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_180984711_180985925_180985997_180988022_180988097_180988177_180988230_180989599
transcript_150133.known	chr3	-	324	3	FSM	ENSG00000205981.9	ENST00000646965.1	324	3	0	0	0	0	multi-exon	FALSE	canonical	2	34	junction_2	740.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAAAGCCTTGGTATAAT	-180966993	True	NA	-15	True	TTTAAA	-23	NA	180989667	180984525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_180984711_180985925_180985997_180989599
transcript_150134.known	chr3	+	2512	1	FSM	ENSG00000181449.4	ENST00000325404.3	2512	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCTTGAGTCTTTCATT	181699574	True	NA	19	True	AATAAA	-24	NA	181711924	181714436	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_181711900_181714400
transcript_150137.known	chr3	+	7315	30	FSM	ENSG00000058063.16	ENST00000323116.10	7315	30	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_9	13.0672822134936	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAAGTGTTCCTTTATTT	182791296	True	NA	12	True	AATAAA	-16	NA	182793503	182921629	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_182793787_182820259_182820377_182828119_182828210_182829671_182829753_182836034_182836143_182836341_182836471_182837070_182837175_182842074_182842123_182845457_182845523_182848475_182848558_182857877_182858029_182859161_182859360_182865455_182865699_182866267_182866444_182867375_182867445_182869077_182869152_182869227_182869332_182872355_182872538_182873811_182874016_182879495_182879650_182880878_182880982_182884752_182884899_182885950_182886011_182887585_182887714_182889409_182889549_182896699_182896766_182897302_182897407_182898606_182898773_182913860_182913995_182918022
transcript_150148.nic	chr3	+	2701	20	ISM	ENSG00000058063.16	ENST00000323116.10	7315	30	-39	41980	-38	-17676	5prime_fragment	TRUE	canonical	3	75	junction_9	13.7625289179012	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGTATATATGTTATAAA	182791257	True	NA	NA	False	NA	NA	NA	182793464	182879649	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_182793787_182820259_182820377_182828119_182828210_182829671_182829753_182836034_182836143_182836341_182836471_182837070_182837175_182842074_182842123_182845457_182845523_182848475_182848558_182857877_182858029_182859161_182859360_182865455_182865699_182866267_182866444_182867375_182867445_182869077_182869152_182869227_182869332_182872355_182872538_182873811_182874016_182879495
transcript_150152.known	chr3	-	3147	7	FSM	ENSG00000043093.15	ENST00000632685.1	3147	7	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_6	27.1932385386923	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATATGGCTGTGTGTGT	-182973098	True	NA	78	True	GATAAA	-40	NA	182980538	182942775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_182945174_182947237_182947335_182947549_182947633_182961225_182961357_182963880_182964050_182965536_182965754_182980486
transcript_150157.known	chr3	-	659	7	FSM	ENSG00000043093.15	ENST00000492563.1	659	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	94.3299469356836	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGTGTAGCACTAAAGGA	-182973080	True	NA	-77	True	AAAAAG	-4	NA	182980520	182945103	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_182945174_182947237_182947335_182947549_182947633_182961225_182961357_182963880_182964050_182965678_182965754_182980486
transcript_15016.known	chr1	+	1178	10	FSM	ENSG00000160752.15	ENST00000467076.5	1178	10	0	0	0	0	multi-exon	FALSE	canonical	3	1047	junction_1	488.417196692225	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATCGTGTAACCTTCT	155287335	True	NA	9	True	NA	NA	NA	155308888	155320647	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155308966_155310063_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
transcript_150172.known	chr3	-	2454	19	FSM	ENSG00000078070.14	ENST00000265594.9	2454	19	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_16	16.5961471060434	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTTCTGCCTCAAAT	-183096512	True	NA	-1	True	AATAAA	-28	NA	183099496	183015217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_183015567_183017265_183017338_183020129_183020238_183022416_183022555_183025754_183025805_183033990_183034078_183037217_183037435_183039025_183039136_183041566_183041751_183045412_183045541_183052158_183052241_183057310_183057423_183070998_183071121_183071209_183071358_183072365_183072488_183086692_183086789_183092408_183092546_183094558_183094606_183099351
transcript_150174.nic	chr3	-	2911	19	NIC	ENSG00000078070.14	novel	2774	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_18	35.3592235683707	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTTCTGCCTCAAAT	-183116053	True	NA	-1	True	AATAAA	-28	NA	183116075	183015217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_183015567_183017265_183017338_183020129_183020238_183022416_183022555_183025754_183025805_183033990_183034078_183037217_183037435_183039025_183039136_183041566_183041751_183045412_183045541_183052158_183052241_183057310_183057423_183070998_183071121_183071209_183071358_183072365_183072488_183086692_183086789_183092408_183092546_183094558_183094606_183115473
transcript_150180.nic	chr3	-	2420	18	NIC	ENSG00000078070.14	novel	2454	19	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_16	34.5847337163144	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTTCTGCCTCAAAT	-183096615	True	NA	-1	True	AATAAA	-28	NA	183099599	183015217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_183015567_183017265_183017338_183020129_183020238_183022416_183022555_183025754_183025805_183033990_183034078_183037217_183037435_183039025_183039136_183041566_183041751_183045412_183045541_183052158_183052241_183057310_183057423_183070998_183071121_183071209_183071358_183072365_183072488_183086692_183086789_183094558_183094606_183099351
transcript_150182.known	chr3	-	2774	18	FSM	ENSG00000078070.14	ENST00000492597.5	2774	18	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_17	46.1749344068191	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTTCTGCCTCAAAT	-183116053	True	NA	-1	True	AATAAA	-28	NA	183116075	183015217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_183015567_183017265_183017338_183020129_183020238_183022416_183022555_183025754_183025805_183033990_183034078_183037217_183037435_183039025_183039136_183041566_183041751_183045412_183045541_183052158_183052241_183057310_183057423_183070998_183071121_183071209_183071358_183072365_183072488_183086692_183086789_183094558_183094606_183115473
transcript_150191.known	chr3	-	2227	17	FSM	ENSG00000078070.14	ENST00000497830.5	2227	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	48.5775394987231	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTGTTTCTGCCTCAA	-183096546	True	NA	-3	True	AATAAA	-26	NA	183099530	183015219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_183015567_183017265_183017338_183020129_183020238_183022416_183022555_183025754_183025805_183033990_183034078_183037217_183037435_183039025_183039136_183041566_183041751_183045412_183045541_183052158_183052241_183057310_183057423_183070998_183071121_183071209_183071358_183086692_183086789_183094558_183094606_183099351
transcript_1502.nic	chr1	-	3018	6	NIC	ENSG00000157911.11	novel	2835	6	NA	NA	-156	0	intron_retention	FALSE	canonical	3	34	junction_5	97.0414344494144	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGTAAAACGTTGAGAGT	NA	False	NA	-10	True	AGTAAA	-17	NA	2413953	2403973	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_2405835_2406483_2406620_2406719_2406896_2408451_2408859_2410370_2410452_2413596
transcript_150201.known	chr3	-	3196	6	FSM	ENSG00000078081.8	ENST00000265598.8	3196	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.489897948556636	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTGCATGTCATTTAT	-183162701	True	NA	-15	True	AATAAA	-14	NA	183162734	183122214	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_183124215_183135716_183135888_183140537_183140596_183152374_183152504_183153681_183154392_183162606
transcript_150205.nnic	chr3	-	3334	16	NNC	ENSG00000053524.13	novel	3090	12	NA	NA	-348	1064	at_least_one_novel_splicesite	TRUE	canonical	3	6	junction_1	4.14514441512262	22	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTATGGCAGACTGCCAAAT	-183429115	True	NA	NA	False	AAGAAA	-13	NA	183429126	183275601	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_183275925_183276871_183276958_183289119_183289221_183295299_183295478_183296975_183297168_183300004_183300197_183309715_183309836_183310914_183311030_183311647_183311773_183318067_183318218_183323234_183323352_183338799_183338920_183341539_183341631_183379296_183379412_183389695_183389780_183427901
transcript_15021.known	chr1	+	1256	10	FSM	ENSG00000160752.15	ENST00000447866.5	1256	10	0	0	0	0	multi-exon	FALSE	canonical	3	942	junction_1	519.73450012221	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGAGATTGCAAGGGCGG	155308761	False	NA	-29	True	GGGGCT	-32	NA	155308793	155320609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155308966_155310042_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
transcript_150212.known	chr3	+	4108	2	FSM	ENSG00000176597.12	ENST00000326505.4	4108	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGAGATGTGTATTTAAA	183252993	True	NA	9	True	AATAAA	-15	NA	183253252	183273385	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_183253473_183269497
transcript_150214.known	chr3	+	3368	2	FSM	ENSG00000176597.12	ENST00000460419.1	3368	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAAACGAAAAAAGAT	183253781	False	NA	NA	False	NA	NA	NA	183253794	183272426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_183254234_183269497
transcript_150219.known	chr3	+	1490	4	FSM	ENSG00000240024.6	ENST00000471496.6	1491	4	0	1	0	0	multi-exon	FALSE	canonical	3	20	junction_1	30.3461511379761	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTTGGTCCTTATTCCT	183446528	True	NA	23	True	AATAAA	-27	NA	183447607	183456013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_183447766_183452077_183452513_183454011_183454094_183455198
transcript_150224.known	chr3	+	1241	4	FSM	ENSG00000240024.6	ENST00000686765.1	1667	4	34	392	2	84	multi-exon	FALSE	canonical	3	71	junction_1	9.67241208569794	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAATT	183446571	True	NA	NA	False	NA	NA	NA	183447650	183455625	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_183447948_183452077_183452513_183454011_183454094_183455198
transcript_150226.known	chr3	+	7380	9	FSM	ENSG00000114796.16	ENST00000454652.6	7380	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	31.8423852749759	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGACTATATGGTTGT	183632150	True	NA	17	True	AATAAA	-18	NA	183635622	183684477	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_183635794_183636220_183636312_183643479_183643543_183650295_183651277_183663457_183663643_183664920_183665040_183671033_183671223_183672295_183672485_183679085
transcript_150234.known	chr3	+	7331	8	FSM	ENSG00000114796.16	ENST00000242810.11	7331	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	21.8426656069338	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGTTCTGTTTTATTT	183632150	True	NA	9	True	ATTAAA	-17	NA	183635622	183684519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_183635794_183643479_183643543_183650295_183651277_183663457_183663643_183664920_183665040_183671033_183671223_183672295_183672485_183679085
transcript_150249.known	chr3	+	6526	31	FSM	ENSG00000163872.16	ENST00000305135.10	6526	31	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_10	22.0152724766745	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTGTTTCTGAGTTTGA	183692862	True	NA	29	True	AATAAA	-17	NA	183697796	183812624	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_183697994_183715143_183715263_183717650_183717749_183718499_183718593_183721890_183722137_183724418_183724532_183728689_183728852_183736717_183736830_183747671_183747717_183752072_183752254_183754125_183754366_183756527_183756690_183758861_183758966_183761506_183761615_183762096_183762280_183772304_183772564_183773632_183773795_183775914_183776124_183777541_183777701_183786124_183786302_183790796_183790981_183797922_183798052_183798890_183798990_183800465_183800569_183801454_183801529_183803255_183803336_183803986_183804189_183806865_183807093_183808029_183808105_183809096_183809171_183810474
transcript_150255.nic	chr3	+	3713	22	NIC	ENSG00000163872.16	novel	6526	31	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_21	39.7328379643138	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATACCTTGTCTGTTTTC	183692833	True	NA	NA	False	AATAAA	-18	NA	183697767	183793486	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_183697994_183715143_183715263_183717650_183717749_183718499_183718593_183721890_183722137_183724418_183724532_183728689_183728852_183736717_183736830_183747671_183747717_183752072_183752254_183754125_183754366_183756527_183756690_183758861_183758966_183761506_183761615_183762096_183762280_183772304_183772564_183773632_183773795_183775914_183776124_183777541_183777701_183786124_183786302_183790796_183790981_183793115
transcript_150259.nic	chr3	+	2525	13	ISM	ENSG00000163872.16	ENST00000305135.10	6526	31	-29	53035	-29	-33897	5prime_fragment	FALSE	canonical	3	132	junction_10	24.5130350811336	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCATCTGACAGCACGTT	183692833	True	NA	NA	False	AATAAA	-19	NA	183697767	183759589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_183697994_183715143_183715263_183717650_183717749_183718499_183718593_183721890_183722137_183724418_183724532_183728689_183728852_183736717_183736830_183747671_183747717_183752072_183752254_183754125_183754366_183756527_183756690_183758861
transcript_150266.known	chr3	-	1545	11	FSM	ENSG00000175193.14	ENST00000639900.1	1545	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	433.807561022166	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGTTTGTAAGCAGATGT	-183873978	True	NA	-17	True	AATAAA	-9	NA	183884879	183829401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_183829710_183833491_183833590_183833723_183833826_183840569_183840641_183842297_183842448_183844230_183844327_183856431_183856552_183862696_183862802_183866624_183866766_183867864_183868061_183884721
transcript_150267.known	chr3	-	1534	11	FSM	ENSG00000175193.14	ENST00000638817.1	1534	11	0	0	0	0	multi-exon	FALSE	canonical	2	34	junction_6	425.031104744112	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTTCTCTCTTTAA	-183874006	True	NA	0	True	AATAAA	-26	NA	183884907	183829384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_183829710_183833491_183833590_183833723_183833826_183840569_183840641_183842297_183842448_183844230_183844327_183856431_183856552_183862752_183862802_183866624_183866766_183867864_183868061_183884721
transcript_150270.known	chr3	-	1347	10	FSM	ENSG00000175193.14	ENST00000421484.5	1347	10	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_6	341.525661960822	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGGAAGATGCCAGCATC	-183874007	True	NA	-66	True	NA	NA	NA	183884908	183829508	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_183829710_183833491_183833590_183833723_183833826_183840569_183840641_183842297_183842448_183844230_183844327_183862696_183862802_183866624_183866766_183867864_183868061_183884721
transcript_150271.known	chr3	-	1501	10	FSM	ENSG00000175193.14	ENST00000317096.9	1501	10	0	0	0	0	multi-exon	FALSE	canonical	3	852	junction_4	146.541950341452	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTTGCCTGTCTTTGGA	-183873979	True	NA	NA	False	NA	NA	NA	183884880	183829270	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_183829710_183833491_183833590_183833723_183833826_183840569_183840641_183842297_183842448_183844230_183844327_183862752_183862802_183866624_183866766_183867864_183868061_183884721
transcript_150275.known	chr3	-	1240	9	FSM	ENSG00000175193.14	ENST00000311101.9	1240	9	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_4	301.323512814715	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGATGTGTGTGTTCTCTC	-183873987	True	NA	-5	True	AATAAA	-21	NA	183884888	183829389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_183829710_183833491_183833590_183833723_183833826_183840569_183840641_183844230_183844327_183862752_183862802_183866624_183866766_183867864_183868061_183884721
transcript_150277.nic	chr3	-	1321	9	NIC	ENSG00000175193.14	novel	1534	11	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	121	junction_2	351.932077963916	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGATGTGTGTGTTCTCTC	-183874020	True	NA	-5	True	AATAAA	-21	NA	183884921	183829389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_183829710_183833491_183833590_183840569_183840641_183842297_183842448_183844230_183844327_183862752_183862802_183866624_183866766_183867864_183868061_183884721
transcript_150281.known	chr3	-	1098	8	FSM	ENSG00000175193.14	ENST00000435888.5	1098	8	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_2	451.041289571098	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAAGCAGATGTGTGTG	-183873954	True	NA	-12	True	AATAAA	-14	NA	183884855	183829396	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_183829710_183833491_183833590_183840569_183840641_183844230_183844327_183862752_183862802_183866624_183866766_183867864_183868061_183884721
transcript_150287.known	chr3	-	890	3	FSM	ENSG00000180834.8	ENST00000431348.1	890	3	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_1	34	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCAGTTGGGAACCGAATT	-183824866	True	NA	NA	False	NA	NA	NA	183825594	183817061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_183817386_183817993_183818112_183825146
transcript_150288.known	chr3	-	549	3	FSM	ENSG00000180834.8	ENST00000445426.1	549	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	26	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCGGATTCTCAACGTGTG	-183825501	False	NA	NA	False	NA	NA	NA	183825521	183817376	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_183817437_183817993_183818108_183825146
transcript_15029.nnic	chr1	+	1318	10	NIC	ENSG00000160752.15	novel	1478	11	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	3	127	junction_1	767.620823320382	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGTTCTGTTCTTGCT	155287345	True	NA	27	True	AATAAA	-16	NA	155308898	155320665	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_155309077_155310042_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
transcript_150293.known	chr3	-	5790	30	FSM	ENSG00000114770.17	ENST00000334444.11	5790	30	0	0	0	0	multi-exon	TRUE	canonical	3	97	junction_20	30.3640613025853	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTCGTGTATCAAACAAT	-184014601	True	NA	-3	True	AATAAA	-22	NA	184017884	183919933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_183921402_183925554_183925720_183927329_183927444_183928746_183928826_183937900_183938061_183942726_183942917_183945849_183945940_183947323_183947511_183949752_183949882_183949971_183950126_183951440_183951571_183951856_183952004_183953085_183953271_183959732_183959836_183961510_183961655_183963384_183963589_183965184_183965258_183965376_183965502_183967694_183967767_183971562_183971920_183977516_183977625_183978502_183978652_183981726_183981875_183982450_183982625_183982773_183983008_183987769_183987918_183988571_183988728_183989225_183989384_184014263_184014448_184017829
transcript_150305.known	chr3	-	1923	7	FSM	ENSG00000114770.17	ENST00000382494.6	1923	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	77.9887812444841	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTGGTATTTAATACTG	-184014606	True	NA	-22	True	AATAAA	-17	NA	184017889	183983752	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_183984895_183985303_183985379_183987769_183987918_183988571_183988728_183989225_183989384_184014263_184014448_184017829
transcript_150306.known	chr3	-	2000	7	FSM	ENSG00000114770.17	ENST00000443376.5	2000	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	85.6687742931396	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTGGTATTTAATACTG	-184014606	True	NA	-22	True	AATAAA	-17	NA	184017889	183983752	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_183984895_183985303_183985456_183987769_183987918_183988571_183988728_183989225_183989384_184014263_184014448_184017829
transcript_150308.known	chr3	-	4697	5	FSM	ENSG00000114770.17	ENST00000427120.6	4697	5	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_2	21.2529409729571	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTGGTATTTAATACTG	-184014580	True	NA	-22	True	AATAAA	-17	NA	184017863	183983752	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_183987918_183988571_183988728_183989225_183989384_184014263_184014448_184017829
transcript_150309.known	chr3	-	883	3	FSM	ENSG00000114770.17	ENST00000446941.2	883	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	82.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCGTGTATGTTTGTCTAT	-184014656	True	NA	NA	False	ATTAAA	-18	NA	184017939	184000662	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_184001252_184014263_184014448_184017829
transcript_150310.known	chr3	+	2613	17	FSM	ENSG00000145191.15	ENST00000648599.1	2613	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	99.1362698511498	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAAGAGAGAGTGGTGT	184131131	True	NA	-6	True	NA	NA	NA	184135378	184145290	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184135581_184136611_184136737_184137619_184137806_184137897_184138076_184138165_184138247_184138846_184138940_184140079_184140158_184140417_184140731_184141924_184142071_184142236_184142379_184142501_184142604_184142778_184142887_184143051_184143143_184143441_184143566_184144098_184144225_184144596_184144708_184144883
transcript_150311.known	chr3	+	2222	16	FSM	ENSG00000145191.15	ENST00000647909.1	2222	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	78.1286688027442	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGATTGAGTGCCCTCCT	184131129	True	NA	NA	False	NA	NA	NA	184135376	184144966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184135581_184136611_184136737_184137619_184137806_184137873_184138076_184138165_184138247_184140079_184140158_184140417_184140731_184141924_184142071_184142236_184142379_184142501_184142604_184142778_184142887_184143051_184143143_184143441_184143566_184144098_184144225_184144596_184144708_184144883
transcript_150313.known	chr3	+	2932	16	FSM	ENSG00000145191.15	ENST00000649688.1	2932	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	117.658262211655	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGGTGTATTTGGTTTG	184131131	True	NA	4	True	ATTAAA	-5	NA	184135378	184145300	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184135581_184136611_184136737_184137619_184137806_184137897_184138076_184138165_184138247_184138846_184138940_184140079_184140158_184140417_184140741_184141924_184142071_184142236_184142379_184142501_184142604_184142778_184142887_184143051_184143566_184144098_184144225_184144596_184144708_184144883
transcript_150320.known	chr3	+	2389	16	FSM	ENSG00000145191.15	ENST00000650270.1	2389	16	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_12	75.5735403431651	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTAAAAGAGAGAGTGGT	184135503	False	NA	-8	True	NA	NA	NA	184135518	184145288	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184135581_184136611_184136737_184137619_184137806_184137897_184138076_184138165_184138247_184140079_184140158_184140417_184140731_184141924_184142071_184142236_184142379_184142501_184142604_184142778_184142887_184143051_184143143_184143430_184143566_184144098_184144225_184144596_184144708_184144883
transcript_150325.known	chr3	+	3460	15	FSM	ENSG00000145191.15	ENST00000481054.5	3460	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	104.680466181614	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTGTCTCCATCCCT	184131137	True	NA	15	True	ATTAAA	-16	NA	184135384	184145311	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184135581_184136611_184136737_184137619_184137806_184137897_184138076_184138165_184138247_184138846_184138940_184140079_184140158_184140417_184140731_184141924_184142071_184142236_184142379_184142501_184142604_184142778_184142887_184143051_184144225_184144596_184144708_184144883
transcript_150326.known	chr3	+	3084	15	FSM	ENSG00000145191.15	ENST00000649814.1	3084	15	0	0	0	0	multi-exon	TRUE	canonical	2	12	junction_9	77.9261817101182	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTCTGCTGCTTGTATA	184131089	True	NA	-33	True	NA	NA	NA	184135336	184145263	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184135581_184136611_184136737_184137619_184137806_184137897_184138076_184138165_184138247_184140079_184140158_184140417_184140731_184141924_184142071_184142236_184142395_184142501_184142604_184142778_184142887_184143051_184143143_184143441_184144225_184144596_184144708_184144883
transcript_15033.known	chr1	+	1198	10	FSM	ENSG00000160752.15	ENST00000612683.1	1198	10	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	716.354626297118	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTCTCAATAAATAATCGT	155287416	True	NA	-1	True	NA	NA	NA	155308969	155320637	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155309077_155310063_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
transcript_150330.known	chr3	+	2665	15	FSM	ENSG00000145191.15	ENST00000648682.1	2665	15	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_7	76.1778598185235	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAGTTGGGATGTGGAA	184131128	True	NA	NA	False	NA	NA	NA	184135375	184145123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184135581_184136611_184136737_184137619_184137806_184137897_184138076_184138165_184138247_184140079_184140158_184140417_184140741_184141924_184142071_184142236_184142379_184142501_184142604_184142778_184142887_184143051_184143566_184144098_184144225_184144596_184144708_184144883
transcript_15035.known	chr1	+	3436	10	FSM	ENSG00000160753.16	ENST00000368352.10	3436	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	103.675776662954	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTTCACTGTGGG	155320569	True	NA	29	True	AATAAA	-15	NA	155320893	155331114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155320992_155321687_155323131_155324844_155324944_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326579_155327133_155328149_155328276_155330402
transcript_15037.known	chr1	+	3114	10	FSM	ENSG00000160753.16	ENST00000368354.7	3114	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	115.973176975445	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTGTCTTTCACTGTG	155320571	True	NA	27	True	AATAAA	-13	NA	155320895	155331112	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155320992_155321687_155323131_155324844_155324944_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326897_155327133_155328149_155328276_155330402
transcript_150375.known	chr3	+	585	2	FSM	ENSG00000145191.15	ENST00000432569.2	585	2	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGTGCCAGTGGACTTT	184131117	True	NA	16	True	AATAAA	-30	NA	184135364	184136980	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184135581_184136611
transcript_150378.nnic	chr3	+	2485	16	NNC	ENSG00000161202.20	novel	5269	15	NA	NA	-68	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	139.400079706657	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCGCTAACTGCTCGCAG	184155271	False	NA	14	True	AATAAA	-15	NA	184155308	184170876	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_184155449_184155562_184155797_184163656_184163727_184164266_184164389_184164491_184164602_184164795_184164932_184165112_184165207_184165421_184165492_184166125_184166266_184166445_184166523_184166605_184166674_184166825_184166976_184167579_184167712_184167897_184168066_184170005_184170222_184170318
transcript_150379.nnic	chr3	+	2552	16	NNC	ENSG00000161202.20	novel	5269	15	NA	NA	-68	67	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	139.400079706657	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTGCCTCTGGCCCCAG	184155271	False	NA	20	True	NA	NA	NA	184155308	184170943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_184155449_184155562_184155797_184163656_184163727_184164266_184164389_184164491_184164602_184164795_184164932_184165112_184165207_184165421_184165492_184166125_184166266_184166445_184166523_184166605_184166674_184166825_184166976_184167579_184167712_184167897_184168066_184170005_184170222_184170318
transcript_150383.known	chr3	+	5269	15	FSM	ENSG00000161202.20	ENST00000313143.9	5269	15	0	0	0	0	multi-exon	FALSE	canonical	3	431	junction_14	42.7825541403913	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATCATTATTATTATTT	184152412	True	NA	33	True	AATAAA	-22	NA	184155376	184173614	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184155797_184163656_184163727_184164266_184164389_184164491_184164602_184164795_184164932_184165112_184165207_184165421_184165492_184166125_184166266_184166445_184166523_184166605_184166674_184166825_184166976_184167579_184167712_184167897_184168066_184170005_184170222_184170318
transcript_150385.known	chr3	+	2289	15	FSM	ENSG00000161202.20	ENST00000431765.6	2289	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_10	141.344996951662	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGTGCGCTAACTGCTCG	184155354	False	NA	11	True	AATAAA	-12	NA	184155564	184170873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184155797_184163656_184163727_184164266_184164389_184164491_184164602_184164795_184164932_184165112_184165207_184165421_184165492_184166125_184166266_184166445_184166523_184166605_184166674_184166876_184166976_184167579_184167712_184167897_184168066_184170005_184170222_184170318
transcript_150396.nic	chr3	+	2737	14	NIC	ENSG00000161202.20	novel	5269	15	NA	NA	-25	0	intron_retention	FALSE	canonical	3	431	junction_13	40.9359436105966	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCGCTAACTGCTCGCAG	184155314	False	NA	14	True	AATAAA	-15	NA	184155351	184170876	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_184155797_184163656_184163727_184164266_184164389_184164491_184164602_184164795_184165207_184165421_184165492_184166125_184166266_184166445_184166523_184166605_184166674_184166825_184166976_184167579_184167712_184167897_184168066_184170005_184170222_184170318
transcript_1504.known	chr1	-	2905	6	FSM	ENSG00000157911.11	ENST00000288774.8	2905	6	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_3	110.4	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGAGAGTATTTCTTTTC	-2410279	True	NA	0	True	AGTAAA	-27	NA	2412564	2403963	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_2405835_2406483_2406620_2406719_2406956_2408451_2408859_2410370_2410452_2412390
transcript_150412.known	chr3	+	1931	12	FSM	ENSG00000161203.14	ENST00000292807.9	1931	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1261.99908318129	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTGGCTTAGTGTTGAT	184132615	True	NA	22	True	AATAAA	-15	NA	184174854	184184091	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184174960_184176950_184177068_184178856_184179123_184180168_184180252_184180644_184180651_184180848_184180985_184181084_184181227_184181695_184181816_184181911_184182048_184182150_184182249_184182756_184182869_184183481
transcript_150417.known	chr3	+	2091	11	FSM	ENSG00000161203.14	ENST00000382456.7	2091	11	0	0	0	0	multi-exon	FALSE	canonical	3	512	junction_4	1055.3005496066	4216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTGGCTTAGTGTTGAT	184174674	False	NA	22	True	AATAAA	-15	NA	184174688	184184091	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184174960_184176950_184177068_184178856_184179123_184180168_184180252_184180848_184180985_184181084_184181227_184181695_184181816_184181911_184182048_184182150_184182249_184182756_184182869_184183481
transcript_150470.known	chr3	+	684	3	ISM	ENSG00000161203.14	ENST00000472560.6	953	6	-31	1937	4	-1937	5prime_fragment	FALSE	canonical	3	4244	junction_2	57.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGGGGCTAGGAACCTGA	184132646	True	NA	NA	False	NA	NA	NA	184174885	184179349	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_184174960_184176950_184177068_184178856
transcript_150486.known	chr3	+	2453	21	FSM	ENSG00000161204.12	ENST00000292808.5	2453	21	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	100.712598516769	1489	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGCCTCATGTCTGCT	184179709	True	NA	18	True	ATTAAA	-15	NA	184186173	184194005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184186281_184186506_184186637_184186795_184186876_184187396_184187444_184187663_184187762_184187860_184187984_184188140_184188408_184188760_184188842_184188928_184188989_184189087_184189145_184189254_184189278_184189387_184189444_184189556_184189758_184189854_184189932_184190998_184191044_184191122_184191256_184192600_184192690_184192804_184192897_184193101_184193235_184193364_184193453_184193539
transcript_15051.nnic	chr1	+	1239	9	NIC	ENSG00000160752.15	novel	1256	10	NA	NA	-18	-2	combination_of_known_splicesites	FALSE	canonical	3	277	junction_8	874.975392511127	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGTGGTTCTGTTCTTG	155308719	False	NA	25	True	AATAAA	-14	NA	155308729	155320663	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_155308966_155310042_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155320408
transcript_150554.known	chr3	-	1552	9	FSM	ENSG00000214160.10	ENST00000397676.8	1552	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	252.195856429086	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGACTGTGGCTCTCTAC	-184243376	True	NA	27	True	NA	NA	NA	184248962	184242300	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_184242677_184242812_184242958_184243553_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184245712_184245813_184248744
transcript_150555.nic	chr3	-	1528	9	NIC	ENSG00000214160.10	novel	1552	9	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	286.116672006369	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGACTGTGGCTCTCTAC	-184243389	True	NA	27	True	NA	NA	NA	184248975	184242300	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_184242677_184242812_184242958_184243553_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184245712_184245813_184248781
transcript_150556.known	chr3	-	1533	9	FSM	ENSG00000214160.10	ENST00000445626.6	1533	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	324.015600511765	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGTGCAACCTACATG	-184249202	True	NA	-3	True	AATAAA	-14	NA	184249548	184242424	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_184242677_184242812_184242958_184243553_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184245712_184245813_184249225
transcript_150561.nic	chr3	-	1404	9	NIC	ENSG00000214160.10	novel	1533	9	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	286.116672006369	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGTGCAACCTACATG	-184243389	True	NA	-3	True	AATAAA	-14	NA	184248975	184242424	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_184242677_184242812_184242958_184243553_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184245712_184245813_184248781
transcript_150566.known	chr3	-	1452	8	FSM	ENSG00000214160.10	ENST00000411922.5	1452	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	334.679255529279	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGACTGTGGCTCTCTAC	-184243376	True	NA	27	True	NA	NA	NA	184248962	184242300	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_184242677_184242812_184242958_184243553_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184248744
transcript_15058.known	chr1	+	1196	9	FSM	ENSG00000160752.15	ENST00000611010.4	1196	9	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	839.139738065121	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGGTTCTGTTCTTGCTC	155308737	False	NA	28	True	AATAAA	-17	NA	155308747	155320666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155308966_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
transcript_150587.known	chr3	-	1697	9	FSM	ENSG00000214160.10	ENST00000455059.5	1697	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	329.081083283436	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTGGTTGGACTCTGCCC	-184249174	True	NA	-47	True	NA	NA	NA	184249520	184242468	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_184242677_184242812_184242958_184243553_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184245712_184245813_184248989
transcript_150588.known	chr3	+	3223	19	FSM	ENSG00000145194.19	ENST00000404464.8	3223	19	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	1.97202659436654	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTCTCTCTTCCTTCAG	NA	False	NA	NA	False	AATAAA	-18	NA	184276021	184293031	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184276193_184276480_184276568_184276891_184277028_184277250_184277467_184277924_184278050_184278166_184278314_184278491_184278558_184283784_184283974_184284962_184285106_184285477_184285593_184287836_184287948_184289436_184289536_184289640_184289719_184290254_184290359_184290556_184290668_184290792_184290861_184291039_184291231_184291343_184291440_184292061
transcript_150591.known	chr3	+	975	3	FSM	ENSG00000284753.2	ENST00000324557.9	975	3	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_2	4	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGGTTTCTTGCTTCTT	184248355	True	NA	18	True	AATACA	-24	NA	184249671	184258759	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184249891_184257472_184257757_184258287
transcript_150600.known	chr3	+	2913	21	FSM	ENSG00000175166.17	ENST00000310118.9	2913	21	0	0	0	0	multi-exon	FALSE	canonical	3	2582	junction_8	233.22787140477	4575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTCTCTGTGTCTGTTTT	184275501	True	NA	24	True	AATAAA	-16	NA	184299240	184309050	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184299402_184299850_184299908_184300279_184300445_184301536_184301659_184301846_184302072_184302369_184302529_184302678_184302824_184303001_184303063_184303319_184303467_184303642_184303750_184303946_184304075_184304303_184304392_184305767_184305931_184306053_184306156_184306349_184306496_184306750_184306835_184307356_184307526_184307613_184307709_184307889_184308017_184308448_184308568_184308707
transcript_150684.nic	chr3	+	2027	15	ISM	ENSG00000175166.17	ENST00000310118.9	2913	21	-96	2600	-53	347	5prime_fragment	FALSE	canonical	3	2582	junction_8	229.305295114062	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAAGGACAAGAAGGAAGC	184275405	True	NA	40	True	AAGAAA	-1	NA	184299144	184306450	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_184299402_184299850_184299908_184300279_184300445_184301536_184301659_184301846_184302072_184302369_184302529_184302678_184302824_184303001_184303063_184303319_184303467_184303642_184303750_184303946_184304075_184304303_184304392_184305767_184305931_184306053_184306156_184306349
transcript_150704.known	chr3	+	581	3	FSM	ENSG00000175166.17	ENST00000492191.5	581	3	0	0	0	0	multi-exon	FALSE	canonical	3	3339	junction_2	58	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGGTTTCATTAGCATG	184275511	True	NA	NA	False	NA	NA	NA	184299250	184300652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184299402_184299850_184299908_184300279
transcript_150707.known	chr3	+	5569	33	FSM	ENSG00000114867.22	ENST00000414031.5	5569	33	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	455.895577236444	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGCCTTTCTGCTTT	184314475	False	NA	19	True	ATTAAA	-16	NA	184314501	184335353	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184314675_184315488_184315546_184315762_184315857_184316071_184316219_184317320_184317498_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323407_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268_184325374_184325479_184325640_184325850_184325952_184326526_184326630_184326880_184326984_184327215_184327449_184327585_184327705_184327829_184328003_184328630_184328757_184328908_184328991_184331265_184331365_184331471_184331607_184331727_184331810_184331945_184332087_184334726
transcript_150710.known	chr3	+	5042	33	FSM	ENSG00000114867.22	ENST00000435046.7	5042	33	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	470.738522787266	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATGTGTCTGAACTAAT	184279529	True	NA	-28	True	NA	NA	NA	184314566	184335017	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184314675_184315488_184315546_184315762_184315857_184316131_184316219_184317320_184317432_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323407_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268_184325374_184325479_184325640_184325850_184325952_184326526_184326630_184326880_184326984_184327215_184327449_184327585_184327705_184327829_184328003_184328630_184328757_184328908_184328991_184331265_184331365_184331471_184331607_184331727_184331810_184331945_184332087_184334726
transcript_150717.nic	chr3	+	5510	33	NIC	ENSG00000114867.22	novel	5569	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	633	junction_14	388.153596973865	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCACTGCCTTTCTGCT	184314475	False	NA	17	True	ATTAAA	-14	NA	184314501	184335351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_184314675_184315488_184315546_184315762_184315857_184316131_184316219_184317320_184317498_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323404_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268_184325374_184325479_184325640_184325850_184325952_184326526_184326630_184326880_184326984_184327215_184327449_184327585_184327705_184327829_184328003_184328630_184328757_184328908_184328991_184331265_184331365_184331471_184331607_184331727_184331810_184331945_184332087_184334726
transcript_150720.known	chr3	+	5405	33	FSM	ENSG00000114867.22	ENST00000346169.7	5405	33	0	0	0	0	multi-exon	FALSE	canonical	3	1177	junction_14	343.108714322079	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGCCTTTCTGCTTT	184279568	True	NA	19	True	ATTAAA	-16	NA	184314605	184335353	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184314675_184315488_184315546_184315762_184315857_184316131_184316219_184317320_184317498_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323407_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268_184325374_184325479_184325640_184325850_184325952_184326526_184326630_184326880_184326984_184327215_184327449_184327585_184327705_184327829_184328003_184328630_184328757_184328908_184328991_184331265_184331365_184331471_184331607_184331727_184331810_184331945_184332087_184334726
transcript_150728.known	chr3	+	5484	33	FSM	ENSG00000114867.22	ENST00000352767.7	5484	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	636.080502195624	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCTTTCTGCTTTATGC	184314468	False	NA	23	True	ATTAAA	-20	NA	184314494	184335357	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184314675_184315762_184315857_184316131_184316219_184316712_184316734_184317320_184317498_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323407_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268_184325374_184325479_184325640_184325850_184325952_184326526_184326630_184326880_184326984_184327215_184327449_184327585_184327705_184327829_184328003_184328630_184328757_184328908_184328991_184331265_184331365_184331471_184331607_184331727_184331810_184331945_184332087_184334726
transcript_15075.known	chr1	+	2503	9	FSM	ENSG00000160753.16	ENST00000368347.8	2503	9	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	70.0311314702254	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTTCACTGTGGG	155323788	False	NA	29	True	AATAAA	-15	NA	155323936	155331114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155324545_155324844_155324944_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326579_155327133_155328149_155328276_155330402
transcript_150754.known	chr3	+	5229	30	FSM	ENSG00000114867.22	ENST00000392537.6	5229	30	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	454.173936205261	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCACTGCCTTTCTGCT	184279504	True	NA	17	True	ATTAAA	-14	NA	184314541	184335351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184314675_184317320_184317498_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323407_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268_184325374_184325479_184325640_184325850_184325952_184326526_184326630_184326880_184326984_184327215_184327449_184327585_184327705_184327829_184328003_184328630_184328757_184328908_184328991_184331265_184331365_184331471_184331607_184331727_184331810_184331945_184332087_184334726
transcript_150756.known	chr3	+	5129	29	FSM	ENSG00000114867.22	ENST00000442406.5	5129	29	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	582.431666965038	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGCCTTTCTGCTTT	184279513	True	NA	19	True	ATTAAA	-16	NA	184314550	184335353	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184314675_184317716_184317817_184319688_184319802_184320629_184320723_184320842_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323407_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268_184325374_184325479_184325640_184325850_184325952_184326526_184326630_184326880_184326984_184327215_184327449_184327585_184327705_184327829_184328003_184328630_184328757_184328908_184328991_184331265_184331365_184331471_184331607_184331727_184331810_184331945_184332087_184334726
transcript_150758.known	chr3	+	4990	29	FSM	ENSG00000114867.22	ENST00000350481.9	4990	29	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	466.996777072303	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGCCTTTCTGCTTT	184279568	True	NA	19	True	ATTAAA	-16	NA	184314605	184335353	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184314675_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323407_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268_184325374_184325479_184325640_184325850_184325952_184326526_184326630_184326880_184326984_184327215_184327449_184327585_184327705_184327829_184328003_184328630_184328757_184328908_184328991_184331265_184331365_184331471_184331607_184331727_184331810_184331945_184332087_184334726
transcript_150780.nic	chr3	+	3154	19	NIC	ENSG00000114867.22	novel	5569	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	633	junction_14	298.061913569962	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATCATTAAAGAAAAG	184314475	False	NA	28	True	NA	NA	NA	184314501	184325299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_184314675_184315488_184315546_184315762_184315857_184316131_184316219_184317320_184317498_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323404_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268
transcript_150781.nic	chr3	+	3151	19	ISM	ENSG00000114867.22	ENST00000346169.7	5405	33	-104	10054	0	0	5prime_fragment	FALSE	canonical	3	1177	junction_14	212.958039395581	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATCATTAAAGAAAAG	184314475	False	NA	28	True	NA	NA	NA	184314501	184325299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_184314675_184315488_184315546_184315762_184315857_184316131_184316219_184317320_184317498_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323407_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268
transcript_150799.known	chr3	+	2907	18	FSM	ENSG00000114867.22	ENST00000426123.5	2907	18	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_4	437.884881618643	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATCATTAAAGAAAAG	184279531	True	NA	28	True	NA	NA	NA	184314568	184325299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184314675_184315488_184315546_184315762_184315857_184316131_184316219_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323407_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268
transcript_15082.known	chr1	+	1968	9	FSM	ENSG00000160753.16	ENST00000368349.8	1968	9	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	68.3893951939919	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTGTCTTTCACTGTG	155322357	True	NA	27	True	AATAAA	-13	NA	155324512	155331112	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155324588_155324844_155324944_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326579_155327133_155328149_155328276_155330402
transcript_150820.known	chr3	+	2808	17	FSM	ENSG00000114867.22	ENST00000413967.5	2808	17	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	453.084687861993	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATCATTAAAGAAAAG	184279530	True	NA	28	True	NA	NA	NA	184314567	184325299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184314675_184315488_184315546_184315762_184315857_184316131_184316219_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323407_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268
transcript_150825.known	chr3	+	2755	17	FSM	ENSG00000114867.22	ENST00000421110.5	2755	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	675.063813534506	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAGAAGCAAAAAGAGATG	184279524	True	NA	23	True	NA	NA	NA	184314561	184324312	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184314675_184315762_184315857_184316131_184316219_184316712_184316734_184317320_184317498_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323404_184323594_184323779_184323978_184324200
transcript_150838.known	chr3	+	2658	16	FSM	ENSG00000114867.22	ENST00000450424.5	2658	16	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	477.279261369414	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTGACTGTGAACTTCC	184279514	True	NA	-63	True	NA	NA	NA	184314551	184324226	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184314675_184315762_184315857_184316131_184316219_184317320_184317498_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323404_184323594_184323779_184323978_184324200
transcript_150852.nic	chr3	+	2442	15	ISM	ENSG00000114867.22	ENST00000346169.7	5405	33	-104	11856	0	-729	5prime_fragment	FALSE	canonical	3	1177	junction_14	196.050558348023	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGAACAAAGCAGAGAAAGC	184314475	False	NA	-5	True	TATAAA	-2	NA	184314501	184323497	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_184314675_184315488_184315546_184315762_184315857_184316131_184316219_184317320_184317498_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323407
transcript_150890.known	chr3	+	5129	34	FSM	ENSG00000114867.22	ENST00000382330.7	5129	34	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	557.553446523315	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATGTGTCTGAACTAAT	184279529	True	NA	-28	True	NA	NA	NA	184314566	184335017	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184314675_184315488_184315546_184315762_184315857_184316131_184316219_184316712_184316734_184317320_184317498_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323407_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268_184325374_184325479_184325640_184325850_184325952_184326526_184326630_184326880_184326984_184327215_184327449_184327585_184327705_184327829_184328003_184328630_184328757_184328908_184328991_184331265_184331365_184331471_184331607_184331727_184331810_184331945_184332087_184334726
transcript_150891.known	chr3	+	5667	32	FSM	ENSG00000114867.22	ENST00000342981.8	5667	32	0	0	0	0	multi-exon	FALSE	canonical	3	633	junction_13	388.144681071799	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTTCTGCTTTATGCC	184314942	True	NA	24	True	ATTAAA	-21	NA	184315165	184335358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184315546_184315762_184315857_184316131_184316219_184317320_184317498_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323404_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268_184325374_184325479_184325640_184325850_184325952_184326526_184326630_184326880_184326984_184327215_184327449_184327585_184327705_184327829_184328003_184328630_184328757_184328908_184328991_184331265_184331365_184331471_184331607_184331727_184331810_184331945_184332087_184334726
transcript_150895.known	chr3	-	3187	24	FSM	ENSG00000114859.16	ENST00000344937.11	3187	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	11.0824372716031	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGCTTGTGCCCGTTGGC	-184361038	True	NA	-1	True	AATAAA	-25	NA	184361602	184346187	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_184346801_184346934_184347022_184352012_184352118_184352292_184352332_184352442_184352497_184352736_184352811_184353032_184353148_184353249_184353423_184353661_184353796_184354100_184354315_184354547_184354608_184354903_184354974_184355373_184355530_184355693_184355779_184356992_184357095_184357181_184357267_184357361_184357488_184357619_184357699_184357778_184357857_184357961_184358096_184358181_184358311_184358681_184358814_184358974_184359132_184361416
transcript_150898.known	chr3	-	3244	24	FSM	ENSG00000114859.16	ENST00000265593.9	3244	24	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_11	6.87616633859799	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGCCCGTTGGCTCT	-184361041	True	NA	2	True	AATAAA	-28	NA	184361605	184346184	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_184346801_184346934_184347022_184352012_184352118_184352292_184352332_184352442_184352497_184352736_184352811_184353032_184353148_184353249_184353423_184353661_184353796_184354100_184354315_184354547_184354659_184354903_184354974_184355373_184355530_184355693_184355779_184356992_184357095_184357181_184357267_184357361_184357488_184357619_184357699_184357778_184357857_184357961_184358096_184358181_184358311_184358681_184358814_184358974_184359132_184361416
transcript_1509.nic	chr1	-	2108	6	NIC	ENSG00000157911.11	novel	2835	6	NA	NA	-91	19	intron_retention	FALSE	canonical	3	34	junction_5	97.0414344494144	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGGTACGTTACTAACAC	NA	False	NA	-27	True	AATAAA	-16	NA	2413888	2404818	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_2405835_2406483_2406620_2406719_2406896_2408451_2408859_2410370_2410452_2413596
transcript_150911.known	chr3	+	1335	7	FSM	ENSG00000175182.15	ENST00000450976.5	1335	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	32.4486774255387	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGTGGGCTCAAGGCT	184334411	True	NA	NA	False	NA	NA	NA	184335925	184345033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184336124_184337310_184337372_184338386_184338530_184341723_184341818_184342065_184342249_184342743_184342861_184344494
transcript_150912.nic	chr3	+	2963	7	NIC	ENSG00000175182.15	novel	1335	7	NA	NA	-41	0	intron_retention	FALSE	canonical	3	4	junction_2	34.2133826967688	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATACATCTGGTCATTGG	184335874	False	NA	22	True	ATTAAA	-27	NA	184335884	184346273	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_184336124_184337310_184337719_184338386_184338530_184341723_184341818_184342065_184342249_184342743_184342861_184344494
transcript_150915.known	chr3	+	2421	6	FSM	ENSG00000175182.15	ENST00000340957.9	2421	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	13.0751673029449	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATACATCTGGTCATTGG	184334422	True	NA	22	True	ATTAAA	-27	NA	184335936	184346273	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184336124_184337310_184337372_184341723_184341818_184342065_184342249_184342743_184342861_184344494
transcript_150917.nic	chr3	+	973	5	ISM	ENSG00000175182.15	ENST00000340957.9	2421	6	-52	3134	-41	0	5prime_fragment	FALSE	canonical	3	59	junction_2	12.4172259381876	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCCGAAAGACCTCAAG	184335874	False	NA	NA	False	NA	NA	NA	184335884	184343139	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_184336124_184337310_184337372_184341723_184341818_184342065_184342249_184342743
transcript_150921.nic	chr3	+	2379	5	NIC	ENSG00000175182.15	novel	2421	6	NA	NA	-8	0	intron_retention	FALSE	canonical	3	26	junction_1	26.5612499705869	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATACATCTGGTCATTGG	184334403	True	NA	22	True	ATTAAA	-27	NA	184335917	184346273	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_184336124_184341723_184341818_184342065_184342249_184342743_184342861_184344494
transcript_150926.known	chr3	+	1802	6	FSM	ENSG00000163882.10	ENST00000456318.6	1807	6	8	-3	-5	1	multi-exon	FALSE	canonical	3	49	junction_1	361.909159873027	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGGTGTATTGTTTC	184361109	True	NA	16	True	AAAAAG	-32	NA	184361717	184368594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184362147_184362872_184363566_184364965_184365050_184365132_184365227_184366716_184366801_184368176
transcript_150942.known	chr3	+	994	5	FSM	ENSG00000163882.10	ENST00000438240.5	994	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	412.692606548748	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGTAAAAAGTCCATTT	184361180	True	NA	-28	True	ATTAAA	-28	NA	184361788	184368550	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184362147_184364965_184365050_184365132_184365227_184366716_184366801_184368176
transcript_150951.known	chr3	+	791	5	FSM	ENSG00000163882.10	ENST00000452961.5	791	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	402.926792358116	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGACTGCCCCTCCCCTTT	184354211	True	NA	13	True	ATTAAA	-11	NA	184363402	184368533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184363575_184364965_184365050_184365132_184365227_184366716_184366801_184368176
transcript_150952.known	chr3	+	878	5	FSM	ENSG00000163882.10	ENST00000429568.1	878	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_4	383.402774507436	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGGTGTATTGTTTCTG	184354242	True	NA	18	True	AAAAAG	-34	NA	184363433	184368596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184363566_184364965_184365050_184365132_184365227_184366716_184366801_184368112
transcript_150953.known	chr3	+	3521	23	FSM	ENSG00000090539.15	ENST00000204604.5	3521	23	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_11	1.73026057369766	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGCATGAGGTTGGCTC	184380054	False	NA	6	True	ATTAAA	-18	NA	184380072	184389829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184380467_184380691_184380796_184381234_184381365_184381495_184381625_184381715_184381816_184381932_184382021_184382388_184382531_184382633_184382775_184382855_184382939_184383015_184383164_184383311_184383419_184383522_184383643_184384536_184384694_184385017_184385239_184386045_184386160_184386491_184386756_184386844_184386939_184387050_184387108_184387373_184387478_184387930_184388034_184388586_184388742_184388892_184388996_184389366
transcript_150954.known	chr3	+	4234	16	FSM	ENSG00000182580.3	ENST00000330394.3	4234	16	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_12	4.86438302585459	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTGCCCCTTCTTATT	184561086	True	NA	NA	False	AATAAA	-14	NA	184561784	184582408	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184562354_184571317_184571383_184572503_184573177_184575829_184575986_184576841_184577184_184577342_184577468_184577657_184577818_184577897_184578007_184578413_184578467_184579476_184579600_184579686_184579935_184580401_184580618_184580728_184580879_184580971_184581166_184581252_184581409_184581513
transcript_150956.nic	chr3	+	4371	15	NIC	ENSG00000182580.3	novel	4234	16	NA	NA	-26	0	intron_retention	FALSE	canonical	3	24	junction_8	4.48580527660217	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTGCCCCTTCTTATT	184561060	True	NA	NA	False	AATAAA	-14	NA	184561758	184582408	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_184562354_184571317_184571383_184572503_184573177_184575829_184575986_184576841_184577184_184577342_184577468_184577657_184577818_184577897_184578007_184578413_184578467_184579476_184579600_184579686_184579935_184580401_184580879_184580971_184581166_184581252_184581409_184581513
transcript_150958.known	chr3	-	1701	1	FSM	ENSG00000177383.5	ENST00000317897.5	1701	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTTCTGTGATGCAC	-184702950	True	NA	-5	True	AATAAA	-19	NA	184712064	184710363	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_184710400_184712100
transcript_150965.known	chr3	+	5011	47	FSM	ENSG00000156931.16	ENST00000436792.6	5011	47	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_16	19.5236272932135	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGCTGGCTGGCTCTCA	184810652	True	NA	16	True	AATAAA	-27	NA	184812170	185052612	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184812226_184824544_184824786_184826162_184826232_184832688_184832820_184834648_184834743_184838713_184838747_184839697_184839753_184849070_184849196_184849935_184850023_184852499_184852568_184853856_184854011_184854113_184854174_184855710_184855819_184859984_184860066_184862896_184863068_184866875_184866951_184868023_184868060_184868945_184869037_184869481_184869529_184870715_184870806_184886109_184886157_184894702_184894926_184898564_184898655_184900920_184900973_184913518_184913562_184914980_184915054_184915354_184915475_184920126_184920199_184924861_184924982_184926593_184926651_184928450_184928534_184929579_184929665_184930469_184930569_184936245_184936336_184940196_184940244_184957373_184957522_184964467_184964558_184966670_184966714_184971648_184971753_184982565_184982648_184983011_184983095_184993982_184994064_184996331_184996502_184999695_184999862_185024335_185024390_185048478_185048560_185051875
transcript_150979.nnic	chr3	+	3099	24	NNC	ENSG00000156931.16	novel	564	4	NA	NA	-7015	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	48.9193232683764	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGGTCTCCTGGCTGGCT	184908227	True	NA	8	True	AATAAA	-19	NA	184908367	185052604	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_184908747_184913518_184913562_184914980_184915054_184915354_184915475_184920126_184920199_184924861_184924982_184926593_184926651_184928450_184928534_184929579_184929665_184930469_184930569_184936245_184936336_184940196_184940244_184957373_184957522_184964467_184964558_184966670_184966714_184971648_184971753_184982565_184982648_184983011_184983095_184993982_184994064_184996331_184996502_184999695_184999862_185024335_185024390_185048478_185048560_185051875
transcript_150985.known	chr3	+	477	2	FSM	ENSG00000156931.16	ENST00000485024.1	477	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTAGATATTTGTAGACTT	184810677	True	NA	4	True	AATAAA	-18	NA	184812195	184816230	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184812226_184815783
transcript_150986.known	chr3	+	5047	47	FSM	ENSG00000156931.16	ENST00000287546.8	5047	47	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	37.6788802264992	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTGGCTGGCTCTCAGT	184810624	True	NA	18	True	AATAAA	-29	NA	184812142	185052614	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_184812226_184824544_184824786_184826162_184826232_184832688_184832820_184834648_184834743_184838713_184838747_184839697_184839759_184849070_184849196_184849935_184850023_184852499_184852568_184853856_184854011_184854113_184854174_184855710_184855819_184859984_184860066_184862896_184863068_184866875_184866951_184868023_184868060_184868945_184869037_184869481_184869529_184870715_184870806_184886109_184886157_184894702_184894926_184898564_184898655_184900920_184900973_184913518_184913562_184914980_184915054_184915354_184915475_184920126_184920199_184924861_184924982_184926593_184926651_184928450_184928534_184929579_184929665_184930469_184930569_184936245_184936336_184940196_184940244_184957373_184957522_184964467_184964558_184966670_184966714_184971648_184971753_184982565_184982648_184983011_184983095_184993982_184994064_184996331_184996502_184999695_184999862_185024335_185024390_185048478_185048560_185051875
transcript_150988.known	chr3	-	3801	7	FSM	ENSG00000113790.11	ENST00000231887.8	3801	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	3.43592135468138	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTCTCCAAAGTGACTT	-185253751	True	NA	2	True	AATAAA	-22	NA	185254049	185190623	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_185193488_185204415_185204758_185218135_185218241_185229431_185229544_185235289_185235463_185248413_185248518_185253948
transcript_150992.known	chr3	+	1681	3	FSM	ENSG00000073803.14	ENST00000448876.5	1681	3	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	12.5	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCACTTGCTGTTCTTTC	185281731	True	NA	11	True	AATAAA	-24	NA	185282940	185293079	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_185283028_185285516_185285644_185291612
transcript_150994.known	chr3	-	2805	5	FSM	ENSG00000163900.11	ENST00000421852.6	2805	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	11.6699400169838	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTGCTTGTTTGAAC	-185498087	True	NA	-7	True	AATAAA	-16	NA	185499035	185489600	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_185491758_185494622_185494762_185495153_185495316_185496827_185496982_185498842
transcript_150997.known	chr3	-	1060	3	FSM	ENSG00000163900.11	ENST00000296254.3	1060	3	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_1	41.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAGAAAAAAAGAAAATGCT	-185498039	True	NA	NA	False	NA	NA	NA	185498987	185490996	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_185491758_185496827_185496982_185498842
transcript_151001.known	chr3	+	5596	17	FSM	ENSG00000163904.13	ENST00000296257.10	5596	17	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	39.9194501465138	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTTTCACTTGTTTTTT	185585418	True	NA	18	True	AATAAA	-18	NA	185586294	185633551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_185586515_185590113_185590170_185598411_185598546_185598957_185599025_185600764_185600856_185606329_185606499_185609246_185609351_185611650_185611746_185612606_185612659_185613344_185613409_185614563_185614741_185617479_185617612_185619298_185619503_185621825_185621906_185623997_185624083_185626297_185626394_185629781
transcript_151005.nic	chr3	+	3311	17	NIC	ENSG00000163904.13	novel	878	7	NA	NA	-63	696	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	29.3954051468933	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATGCTGAAATGATTTC	NA	False	NA	25	True	AATAAA	-26	NA	185582432	185631101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_185582818_185590113_185590170_185598411_185598546_185598957_185599025_185600764_185600856_185606329_185606499_185609246_185609351_185611650_185611746_185612606_185612659_185613344_185613409_185614563_185614741_185617479_185617612_185619298_185619503_185621825_185621906_185623997_185624083_185626297_185626394_185629781
transcript_151029.known	chr3	-	3291	15	FSM	ENSG00000073792.16	ENST00000346192.7	3291	15	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_6	142.746385636362	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATGACAAAGAAAAACAGAG	-185810364	True	NA	20	True	TTTAAA	-10	NA	185825024	185643974	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_185645624_185647024_185647139_185649402_185649535_185652093_185652169_185657285_185657403_185658340_185658410_185675295_185675432_185675790_185675914_185687056_185687192_185689354_185689628_185692698_185692763_185696611_185696664_185698298_185698348_185823152_185823214_185824782
transcript_151030.known	chr3	-	3426	16	FSM	ENSG00000073792.16	ENST00000457616.6	3426	16	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_12	199.368068322554	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATGACAAAGAAAAACAGAG	-185810352	True	NA	20	True	TTTAAA	-10	NA	185825012	185643974	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_185645624_185647024_185647139_185649402_185649535_185652093_185652169_185657285_185657403_185658340_185658410_185672540_185672670_185675295_185675432_185675790_185675914_185687056_185687192_185689354_185689628_185692698_185692781_185696611_185696664_185698298_185698348_185823152_185823214_185824782
transcript_151032.known	chr3	-	1697	10	FSM	ENSG00000136527.19	ENST00000456380.5	1697	10	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_8	482.057396306014	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTTCTTTCTAACATAT	-185903293	True	NA	-37	True	AATAAA	-13	NA	185938029	185917329	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_185917726_185918364_185918439_185919436_185919497_185921103_185921188_185922010_185922127_185923795_185923985_185925463_185925627_185926600_185926735_185931576_185931853_185937824
transcript_151037.known	chr3	-	4178	9	FSM	ENSG00000136527.19	ENST00000453386.7	4178	9	0	0	0	0	multi-exon	TRUE	canonical	3	1023	junction_8	98.7540347277011	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGATTGGTTCTATTCC	-185903278	True	NA	-1	True	AATATA	-29	NA	185938014	185914557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_185917726_185918364_185918439_185919436_185919497_185921103_185921188_185922010_185922127_185923795_185923985_185925463_185925627_185926600_185926735_185937824
transcript_151044.known	chr3	-	976	8	FSM	ENSG00000136527.19	ENST00000382191.4	976	8	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_7	409.914177179884	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATGAAGACTTTCTGAAA	-185938089	False	NA	NA	False	ATTAAA	-36	NA	185938103	185917714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_185917726_185918364_185918439_185919436_185919497_185921103_185921188_185922010_185922127_185923795_185923985_185925463_185925627_185937824
transcript_151054.known	chr3	-	288	2	FSM	ENSG00000136527.19	ENST00000480461.1	538	2	11	239	1	-239	multi-exon	FALSE	canonical	3	88	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGAAAGAATGCATGCT	-185903277	True	NA	12	True	NA	NA	NA	185938013	185931753	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_185931853_185937824
transcript_151056.known	chr3	-	4485	10	FSM	ENSG00000136527.19	ENST00000487615.5	4485	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_9	495.128266209878	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTCTTTCTAACATATC	-185937406	False	34736	-36	True	AATAAA	-14	NA	185937420	185917328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_185917726_185918364_185918439_185919436_185919497_185921103_185921188_185922010_185922127_185923795_185923985_185925463_185925627_185926600_185926735_185931576_185931853_185934428
transcript_151059.known	chr3	-	2213	13	FSM	ENSG00000244405.8	ENST00000434744.5	2213	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	69.0098121042701	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTCTGATTTGCACAATT	-186101801	False	NA	NA	False	ACTAAA	-16	NA	186108675	186048251	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_186048861_186052029_186052132_186057074_186057245_186057422_186057492_186064416_186064477_186065812_186066073_186079816_186080105_186081045_186081176_186105304_186105356_186105448_186105497_186105624_186105713_186105823_186105943_186108456
transcript_151060.known	chr3	-	4082	13	FSM	ENSG00000244405.8	ENST00000306376.10	4082	13	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_7	27.0907682102635	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGAACCTGCCTCTTTCTT	-186102215	True	NA	-4	True	AATAAA	-27	NA	186109089	186046313	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_186048861_186052029_186052132_186057074_186057245_186057422_186057492_186064416_186064477_186065812_186066073_186079816_186080105_186081045_186081176_186105304_186105356_186105448_186105497_186105624_186105713_186105823_186105943_186108939
transcript_151067.known	chr3	-	642	6	FSM	ENSG00000244405.8	ENST00000476890.1	642	6	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	81.8984737342522	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTACAGGTTGAGTATTA	-186102207	True	NA	-5	True	AATAAA	-21	NA	186109081	186095119	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_186095314_186105304_186105356_186105448_186105497_186105624_186105713_186105823_186105943_186108939
transcript_15107.known	chr1	+	1700	8	FSM	ENSG00000160753.16	ENST00000490373.5	1700	8	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	81.7447495661504	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCCACCTGTAAGGTGAAA	155322366	True	NA	20	True	AATAAA	-20	NA	155324521	155330730	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155324810_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326579_155327133_155328149_155328276_155330402
transcript_151070.known	chr3	+	1640	10	FSM	ENSG00000090520.12	ENST00000265028.8	1640	10	0	0	0	0	multi-exon	FALSE	canonical	3	756	junction_4	67.5548245574486	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGACTCCTGTTTCTTC	186560489	True	NA	31	True	AATACA	-17	NA	186570719	186585793	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_186570966_186572094_186572252_186575839_186575938_186577667_186577801_186581370_186581514_186581994_186582078_186582715_186582774_186583864_186583977_186584429_186584590_186585343
transcript_151080.known	chr3	-	2700	8	FSM	ENSG00000113838.13	ENST00000338733.10	2700	8	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_2	13.7840487520902	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTCCTTTTTTTGTAAA	-186565565	True	NA	NA	False	AATAAA	-15	NA	186567339	186546066	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_186546956_186551128_186551280_186554253_186554752_186554897_186555085_186556408_186556776_186558416_186558573_186563993_186564373_186567266
transcript_151081.known	chr3	-	3058	8	FSM	ENSG00000113838.13	ENST00000424280.5	3058	8	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_7	50	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATAATTTCCTTTTTT	NA	False	NA	NA	False	AATAAA	-9	NA	186570543	186546072	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_186546956_186551128_186551280_186554253_186554752_186554897_186555085_186556408_186556776_186558416_186558573_186563993_186564373_186570106
transcript_151091.known	chr3	-	2186	7	FSM	ENSG00000113838.13	ENST00000446782.5	2186	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	59.4754851458425	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATAGTGTGTATCTTCA	-186570078	True	NA	-19	True	ATTAAA	-21	NA	186570318	186546340	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_186546956_186551128_186551280_186554253_186554752_186554897_186555085_186556408_186556776_186558416_186558573_186570106
transcript_151093.known	chr3	-	1365	11	FSM	ENSG00000163918.12	ENST00000296273.7	1365	11	0	0	0	0	multi-exon	FALSE	canonical	3	496	junction_10	118.059349481521	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTTTAAAGTGAATATACAA	-186796334	True	NA	-63	True	AATAAA	-20	NA	186806482	186789899	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_186790065_186790141_186790256_186790325_186790407_186791724_186791851_186792489_186792611_186792803_186792948_186794657_186794778_186797534_186797615_186801116_186801196_186804582_186804725_186806289
transcript_151094.known	chr3	-	1448	11	FSM	ENSG00000163918.12	ENST00000392481.6	1448	11	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_10	179.145332063105	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTGAATATACAATTTAT	-186806640	True	NA	-58	True	AATAAA	-25	NA	186806695	186789894	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_186790065_186790141_186790256_186790325_186790407_186791724_186791851_186792489_186792611_186792803_186792948_186794657_186794778_186797534_186797615_186801116_186801196_186804582_186804725_186806424
transcript_15110.known	chr1	+	1749	8	FSM	ENSG00000160753.16	ENST00000471876.5	1749	8	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	106.406805060886	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTTCACTGTGGG	155322383	True	NA	29	True	AATAAA	-15	NA	155324538	155331114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155324810_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326897_155327133_155328149_155328276_155330402
transcript_151107.known	chr3	-	1393	8	FSM	ENSG00000163918.12	ENST00000494047.5	1393	8	0	0	0	0	multi-exon	FALSE	canonical	3	496	junction_7	139.158696663711	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACGGGGTTTCACGATGT	-186796320	True	NA	NA	False	NA	NA	NA	186806468	186791322	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_186791851_186792489_186792611_186792803_186792948_186794657_186794778_186797534_186797615_186801116_186801196_186804582_186804725_186806289
transcript_151109.known	chr3	+	1889	11	FSM	ENSG00000156976.17	ENST00000440191.6	1889	11	0	0	0	0	multi-exon	FALSE	canonical	3	552	junction_1	570.907663287155	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTTGGTCATTTTAT	186693054	True	NA	23	True	AATAAA	-19	NA	186783576	186789897	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_186783640_186784428_186784478_186784563_186784697_186784961_186785102_186785882_186786052_186786163_186786274_186786501_186786646_186787126_186787265_186787494_186787585_186787802_186787883_186789124
transcript_151110.known	chr3	+	1977	12	FSM	ENSG00000156976.17	ENST00000425053.5	1977	12	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_11	775.944393935119	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATTCACTTTAAAGGTG	186693054	True	NA	7	True	AATAAA	-3	NA	186783576	186789881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_186783640_186784431_186784478_186784563_186784697_186784961_186785102_186785882_186786052_186786163_186786274_186786501_186786646_186787126_186787265_186787494_186787585_186787802_186787883_186788309_186788417_186789124
transcript_151121.nnic	chr3	+	4729	9	NIC	ENSG00000073849.16	novel	4510	10	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	108.921990433521	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTCTCTCTTCTTATT	186921163	True	NA	20	True	AATAAA	-20	NA	186930484	187078553	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_186930835_186948854_186948939_186963784_186963927_187038741_187038874_187042653_187043311_187051248_187051347_187072848_187072948_187074158_187074334_187075561
transcript_151123.known	chr3	+	4604	8	FSM	ENSG00000073849.16	ENST00000169298.8	4604	8	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	47.9723559852496	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTCTCTCTTCTTATT	186921204	True	NA	20	True	AATAAA	-20	NA	186930525	187078553	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_186930835_186963784_186963927_187038741_187038874_187042653_187043311_187051248_187051347_187072848_187072948_187074158_187074334_187075561
transcript_151125.known	chr3	+	3947	7	FSM	ENSG00000073849.16	ENST00000457772.6	3947	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	104.774360731367	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTCTCTCTTCTTATT	186921204	True	NA	20	True	AATAAA	-20	NA	186930525	187078553	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_186930835_186963784_186963927_187038741_187038874_187051248_187051347_187072848_187072948_187074158_187074334_187075561
transcript_151140.nnic	chr3	-	976	5	NNC	ENSG00000163923.10	novel	749	4	NA	NA	27	-19955	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_2	282.290076871292	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAATGTCAAAGTCCTC	-187180827	False	NA	-3	True	AATAAA	-19	NA	187180881	187140902	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_187141172_187142295_187142393_187142775_187143109_187173615_187173676_187180664
transcript_151142.nnic	chr3	-	902	5	NNC	ENSG00000163923.10	novel	749	4	NA	NA	17	-20039	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_2	282.290076871292	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAAATGTGAAATGCTTG	-187180837	False	NA	-14	True	AATAAA	-10	NA	187180891	187140986	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_187141172_187142295_187142393_187142775_187143109_187173615_187173676_187180664
transcript_151145.known	chr3	-	749	4	FSM	ENSG00000163923.10	ENST00000433055.1	749	4	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_2	234.623575589117	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTCTGTCATCTTTAAAA	-187180854	False	NA	-2	True	AATAAA	-26	NA	187180908	187120947	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_187121329_187127998_187128063_187173615_187173676_187180664
transcript_151148.nnic	chr3	-	1392	4	NNC	ENSG00000163923.10	novel	749	4	NA	NA	-6	-19955	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_1	293.966362399208	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAATGTCAAAGTCCTC	-187180860	False	NA	-3	True	AATAAA	-19	NA	187180914	187140902	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_187141172_187142295_187143109_187173615_187173676_187180664
transcript_151149.nnic	chr3	-	1355	4	NNC	ENSG00000163923.10	novel	749	4	NA	NA	-53	-20039	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_1	293.966362399208	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAAATGTGAAATGCTTG	-187180893	True	NA	-14	True	AATAAA	-10	NA	187180961	187140986	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_187141172_187142295_187143109_187173615_187173676_187180664
transcript_151154.known	chr3	-	729	3	FSM	ENSG00000163923.10	ENST00000296277.9	729	3	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_2	102	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTCTGTCATCTTTAAAA	-187134051	True	NA	-2	True	AATAAA	-26	NA	187139496	187120947	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_187121329_187127998_187128063_187139212
transcript_151161.nnic	chr3	-	444	3	NNC	ENSG00000163923.10	novel	749	4	NA	NA	-16	-50634	at_least_one_novel_splicesite	FALSE	canonical	3	319	junction_1	218.5	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCTGGAATATTTTCTT	-187180870	False	NA	-22	True	AATAAA	-10	NA	187180924	187171581	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_187171706_187173615_187173676_187180664
transcript_151167.known	chr3	-	653	2	FSM	ENSG00000163923.10	ENST00000455270.5	653	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTCTGTCATCTTTAAAA	-187134039	True	NA	-2	True	AATAAA	-26	NA	187139484	187120947	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_187121329_187139212
transcript_151170.nnic	chr3	-	3239	2	NNC	ENSG00000163923.10	novel	749	4	NA	NA	-201	-51403	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGGGGCAGAACTGTATA	-187181055	False	NA	NA	False	AAAAAG	-13	NA	187181109	187172350	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_187175145_187180664
transcript_151171.nnic	chr3	-	2603	2	NNC	ENSG00000163923.10	novel	749	4	NA	NA	6	-51832	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTTATGCCCCAATGTT	-187180848	False	NA	NA	False	AATAAA	-9	NA	187180902	187172779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_187175145_187180664
transcript_151175.nnic	chr3	+	1658	3	NNC	ENSG00000175077.6	novel	2214	2	NA	NA	-19152	-993	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	10	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTAACTACTTTTAAAAAG	187178201	False	NA	38	True	NA	NA	NA	187178333	187200469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_187178875_187197589_187197788_187199550
transcript_151179.known	chr3	-	3894	11	FSM	ENSG00000127241.18	ENST00000296280.11	3894	11	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_3	4.4226688774992	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGCTTATGGGTTTTG	-187291727	False	NA	0	True	AATAAA	-20	NA	187291737	187234081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_187236568_187241480_187241556_187243483_187243622_187250250_187250330_187251633_187251753_187253167_187253316_187256663_187256861_187260740_187260873_187262542_187262721_187285824_187286057_187291627
transcript_151182.known	chr3	-	3900	10	FSM	ENSG00000127241.18	ENST00000392472.6	3900	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	4.66931141987793	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTTGGCTTATGGGTTT	-187291918	True	NA	-2	True	AATAAA	-18	NA	187291977	187234083	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_187236568_187241480_187241556_187243483_187243622_187250250_187250330_187251633_187251753_187253167_187253316_187256663_187256861_187260740_187260873_187262542_187262721_187291627
transcript_151184.known	chr3	-	607	2	FSM	ENSG00000157005.4	ENST00000287641.4	607	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATTTGGTTTCTATTG	-187670348	True	NA	3	True	AATAAA	-23	NA	187670394	187668911	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_187669278_187670153
transcript_151185.nic	chr3	+	2353	12	NIC	ENSG00000145012.14	novel	612	5	NA	NA	-126	8219	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	15.7091329965766	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATAAGAAATACTAGAGTAA	188153730	False	NA	21	True	AAGAAA	-3	NA	188153745	188874528	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_188154022_188225404_188225528_188341662_188341720_188406111_188406314_188484591_188484705_188524664_188524788_188609160_188609845_188708266_188708394_188760112_188760283_188866199_188866379_188872642_188872764_188874350
transcript_151188.nic	chr3	+	2212	11	NIC	ENSG00000145012.14	novel	612	5	NA	NA	-42	8219	combination_of_known_junctions	FALSE	canonical	1	6	junction_2	14.7312592808626	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATAAGAAATACTAGAGTAA	188153814	False	NA	21	True	AAGAAA	-3	NA	188153829	188874528	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_188154022_188225404_188225528_188406111_188406314_188484591_188484705_188524664_188524788_188609160_188609845_188708266_188708394_188760112_188760283_188866199_188866379_188872642_188872764_188874350
transcript_151195.known	chr3	-	697	2	FSM	ENSG00000234076.1	ENST00000444488.1	697	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTGGCCAACATGGTGA	-188947627	False	NA	NA	False	NA	NA	NA	188947639	188941714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_188942051_188947278
transcript_151198.known	chr3	-	3477	15	FSM	ENSG00000090530.10	ENST00000319332.10	3477	15	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_14	26.8663548031392	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGGCATTTATTTTTGT	-190119001	True	NA	-33	True	AATAAA	-17	NA	190120897	189956727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_189958005_189963957_189964099_189970815_189970892_189971889_189972008_189972873_189973025_189973908_189974005_189974557_189974686_189983045_189983141_189984549_189984591_189986787_189986878_189987526_189987670_189988906_189989039_189994093_189994284_189995289_189995443_190120251
transcript_151204.known	chr3	+	4745	12	FSM	ENSG00000196083.10	ENST00000447382.6	4745	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	6.6506695120625	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTTTGTGCATGTGTT	190513631	True	NA	NA	False	AATAAA	-22	NA	190514084	190651514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_190514220_190556129_190556217_190564288_190564354_190604127_190604414_190608994_190609182_190620274_190620441_190623343_190623416_190627322_190627450_190629349_190629499_190644247_190644398_190645698_190645843_190648337
transcript_151205.known	chr3	+	4697	11	FSM	ENSG00000196083.10	ENST00000072516.7	4697	11	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_9	5.6	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGCATGTGTTTTATG	190513597	True	NA	NA	False	AATAAA	-27	NA	190514050	190651519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_190514220_190564288_190564354_190604127_190604414_190608994_190609182_190620274_190620441_190623343_190623416_190627322_190627450_190629349_190629499_190644247_190644398_190645698_190645843_190648337
transcript_151206.known	chr3	+	2048	9	FSM	ENSG00000196083.10	ENST00000422485.5	2048	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	6.86362695664617	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGACTGTGTCTAAAACTT	190513644	True	NA	27	True	AATAAA	-43	NA	190514097	190630285	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_190514220_190556129_190556217_190564288_190564354_190604127_190604414_190608994_190609182_190620274_190620441_190623343_190623416_190627322_190627450_190629349
transcript_151207.known	chr3	+	1957	8	FSM	ENSG00000196083.10	ENST00000422940.5	1957	8	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	4.3705881545081	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGACTGTGTCTAAAACTT	190513648	True	NA	27	True	AATAAA	-43	NA	190514101	190630285	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_190514220_190564288_190564354_190604127_190604414_190608994_190609182_190620274_190620441_190623343_190623416_190627322_190627450_190629349
transcript_151209.known	chr3	+	8629	12	FSM	ENSG00000152492.15	ENST00000392455.9	8629	12	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	93.3297716754506	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCAGTTGGAGAAGTAGCT	191326664	True	NA	1	True	AATAAA	-15	NA	191329393	191398659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_191329724_191357087_191357151_191357997_191358125_191361068_191361160_191369918_191370037_191375061_191375590_191380158_191380275_191380686_191380732_191380827_191380933_191382745_191382826_191389495_191389603_191391740
transcript_151212.known	chr3	+	1926	11	FSM	ENSG00000152492.15	ENST00000392456.4	1926	11	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_5	31.8113187403478	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTAATGTATGATATTTTG	NA	False	NA	20	True	AATAAA	-27	NA	191329084	191392175	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_191329724_191357087_191357151_191357997_191358125_191361068_191361160_191369918_191370037_191380158_191380275_191380686_191380732_191380827_191380933_191382745_191382826_191389495_191389603_191391740
transcript_151216.known	chr3	-	3058	5	FSM	ENSG00000114279.15	ENST00000454309.6	3058	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	10.356157588604	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAAAAACACAAAA	-192408863	True	NA	6	True	NA	NA	NA	192409049	192142508	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_192144128_192170457_192170657_192335360_192335465_192360427_192360539_192408024
transcript_151227.known	chr3	-	3063	2	FSM	ENSG00000180611.7	ENST00000392452.3	3063	2	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	0	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTTGTTTGTAATC	-192915599	True	NA	0	True	AATAAA	-25	NA	192917856	192796814	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_192799651_192917629
transcript_151232.known	chr3	+	969	4	FSM	ENSG00000127252.7	ENST00000264735.4	969	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	9.17726659862414	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTGAGCCAATGAAATTT	193240918	True	NA	12	True	AATAAA	-22	NA	193241221	193270855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_193241534_193255650_193255790_193262969_193263236_193270603
transcript_151233.known	chr3	+	6429	31	FSM	ENSG00000198836.11	ENST00000361510.8	6429	31	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_5	79.3953818976058	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTGCCAAGGCTGTCA	193583184	True	NA	10	True	TATAAA	-19	NA	193593207	193697811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_193593410_193614722_193615042_193615673_193615771_193617177_193617286_193617783_193617838_193618868_193618937_193626091_193626203_193631611_193631666_193635417_193635523_193637194_193637282_193637951_193638066_193642764_193642846_193642974_193643050_193643372_193643445_193643527_193643628_193643974_193644106_193645552_193645626_193645727_193645801_193647064_193647181_193648069_193648135_193648794_193648872_193654861_193655028_193657079_193657233_193658886_193658996_193659481_193659562_193662821_193662963_193664879_193664997_193666295_193666390_193667169_193667281_193692062_193692133_193694605
transcript_151241.known	chr3	+	4087	30	FSM	ENSG00000198836.11	ENST00000392437.6	4087	30	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_5	86.1767533507368	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGGACATTCAAGCAAAG	193583256	True	NA	25	True	AATAAA	-16	NA	193593279	193695652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_193593410_193614722_193615042_193615673_193615771_193617177_193617286_193617783_193617838_193618868_193618937_193631611_193631666_193635417_193635523_193637194_193637282_193637951_193638066_193642764_193642846_193642974_193643050_193643372_193643445_193643527_193643628_193643974_193644106_193645552_193645626_193645727_193645801_193647064_193647181_193648069_193648135_193648794_193648872_193654861_193655028_193657079_193657233_193658886_193658996_193659481_193659562_193662821_193662963_193664879_193664997_193666295_193666390_193667169_193667281_193692062_193692133_193694605
transcript_151243.known	chr3	+	6397	30	FSM	ENSG00000198836.11	ENST00000361908.8	6397	30	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_6	44.6782126687836	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTGCCAAGGCTGTCA	193583162	True	NA	10	True	TATAAA	-19	NA	193593185	193697811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_193593410_193614722_193615042_193615673_193615771_193617177_193617286_193618868_193618937_193626091_193626203_193631611_193631666_193635417_193635523_193637194_193637282_193637951_193638066_193642764_193642846_193642974_193643050_193643372_193643445_193643527_193643628_193643974_193644106_193645552_193645626_193645727_193645801_193647064_193647181_193648069_193648135_193648794_193648872_193654861_193655028_193657079_193657233_193658886_193658996_193659481_193659562_193662821_193662963_193664879_193664997_193666295_193666390_193667169_193667281_193692062_193692133_193694605
transcript_151249.known	chr3	+	5008	30	FSM	ENSG00000198836.11	ENST00000645553.1	5008	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	99.5973343673397	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGAGTAAACCCTGTGTC	193583263	True	NA	NA	False	AATAAA	-9	NA	193593286	193696619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_193593410_193614722_193615042_193615673_193615771_193617177_193617286_193618868_193618937_193631611_193631666_193631754_193631770_193635417_193635523_193637194_193637282_193637951_193638066_193642764_193642846_193642974_193643050_193643372_193643445_193643527_193643628_193643974_193644106_193645552_193645626_193645727_193645801_193647064_193647181_193648069_193648135_193648794_193648872_193654861_193655028_193657079_193657233_193658886_193658996_193659481_193659562_193662821_193662963_193664879_193664997_193666295_193666390_193667169_193667281_193692062_193692133_193694605
transcript_151255.known	chr3	+	6328	29	FSM	ENSG00000198836.11	ENST00000361828.7	6328	29	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_5	55.0833667808928	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTGCCAAGGCTGTCA	193583120	True	NA	10	True	TATAAA	-19	NA	193593143	193697811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_193593410_193614722_193615042_193615673_193615771_193617177_193617286_193618868_193618937_193631611_193631666_193635417_193635523_193637194_193637282_193637951_193638066_193642764_193642846_193642974_193643050_193643372_193643445_193643527_193643628_193643974_193644106_193645552_193645626_193645727_193645801_193647064_193647181_193648069_193648135_193648794_193648872_193654861_193655028_193657079_193657233_193658886_193658996_193659481_193659562_193662821_193662963_193664879_193664997_193666295_193666390_193667169_193667281_193692062_193692133_193694605
transcript_151259.known	chr3	+	6330	29	FSM	ENSG00000198836.11	ENST00000361150.6	6330	29	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	72.9290523980222	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGCTGCCAAGGCTGTC	193583120	True	NA	9	True	TATAAA	-18	NA	193593143	193697810	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_193593410_193614722_193615042_193615673_193615771_193618868_193618937_193626091_193626203_193631611_193631666_193635417_193635523_193637194_193637282_193637951_193638066_193642764_193642846_193642974_193643050_193643372_193643445_193643527_193643628_193643974_193644106_193645552_193645626_193645727_193645801_193647064_193647181_193648069_193648135_193648794_193648872_193654861_193655028_193657079_193657233_193658886_193658996_193659481_193659562_193662821_193662963_193664879_193664997_193666295_193666390_193667169_193667281_193692062_193692133_193694605
transcript_151264.known	chr3	+	3579	28	FSM	ENSG00000198836.11	ENST00000392436.7	3579	28	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_27	81.3555086817539	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTAGTTGGTACCTCTG	193583196	True	NA	NA	False	AATAAA	-9	NA	193593219	193668917	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_193593410_193614722_193615042_193615673_193615771_193617177_193617286_193618868_193618937_193631611_193631666_193635417_193635523_193637194_193637282_193637951_193638066_193642764_193642846_193642974_193643050_193643372_193643445_193643527_193643628_193643974_193644106_193645552_193645626_193645727_193645801_193647064_193647181_193648069_193648135_193648794_193648872_193654861_193655028_193657079_193657233_193658886_193658996_193659481_193659562_193662821_193662963_193664879_193664997_193666295_193666390_193667169_193667281_193668314
transcript_151265.known	chr3	+	5830	28	FSM	ENSG00000198836.11	ENST00000646793.1	5830	28	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	80.6521260234271	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTATAATTCTATTATTG	193583223	True	NA	6	True	ATTAAA	-14	NA	193593246	193697524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_193593410_193614722_193615042_193615673_193615771_193618868_193618937_193631611_193631666_193635417_193635523_193637194_193637282_193637951_193638066_193642764_193642846_193642974_193643050_193643372_193643445_193643527_193643628_193643974_193644106_193645552_193645626_193645727_193645801_193647064_193647181_193648069_193648135_193648794_193648872_193654861_193655028_193657079_193657233_193658886_193658996_193659481_193659562_193662821_193662963_193664879_193664997_193666295_193666390_193667169_193667281_193692062_193692133_193694605
transcript_151277.known	chr3	+	1575	4	FSM	ENSG00000114315.4	ENST00000232424.4	1575	4	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_2	32.2524762184584	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAACTTTTCACCAATCCT	194131763	True	NA	15	True	ATTAAA	-21	NA	194136147	194138732	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_194136489_194136616_194136713_194136960_194137049_194137682
transcript_151279.nic	chr3	+	2169	3	ISM	ENSG00000114315.4	ENST00000232424.4	1575	4	-85	125	-85	-125	intron_retention	FALSE	canonical	3	274	junction_2	39.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGTCTTCGAACTGAT	194131678	True	NA	10	True	AATAAA	-17	NA	194136062	194138607	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_194136489_194136616_194136713_194136960
transcript_151280.known	chr3	+	1009	2	FSM	ENSG00000114315.4	ENST00000476918.1	1009	2	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGACTTAGGACTGTGGC	194131763	True	NA	NA	False	NA	NA	NA	194136147	194137284	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_194136489_194136616
transcript_151283.known	chr3	+	4437	4	FSM	ENSG00000233058.3	ENST00000662856.1	4437	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.86744175568088	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTGTAAGTTCATTAAAC	194486668	True	NA	-26	True	NA	NA	NA	194487145	194521154	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_194487173_194488598_194488727_194497937_194498136_194517070
transcript_151284.known	chr3	+	5557	3	FSM	ENSG00000233058.3	ENST00000448892.2	5557	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTAAGTTCATTAAACCT	194487443	True	NA	-24	True	NA	NA	NA	194487453	194521156	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_194488727_194497937_194498136_194517070
transcript_151285.known	chr3	+	2398	3	FSM	ENSG00000233058.3	ENST00000437597.2	2398	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGTCTCAAAAAAAAAAAAAA	194486668	True	NA	NA	False	NA	NA	NA	194487145	194500180	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_194487173_194488598_194488727_194497937
transcript_151286.known	chr3	+	3794	2	FSM	ENSG00000233058.3	ENST00000671306.1	3794	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCTGGCCTTGGCAACAG	194486668	True	NA	NA	False	NA	NA	NA	194487145	194500150	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_194488727_194497937
transcript_151291.known	chr3	-	3283	14	FSM	ENSG00000041802.11	ENST00000265245.10	3283	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	73.7092480930166	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTCTCTGGTATTTCT	-194661730	True	NA	-14	True	ATTAAA	-18	NA	194672191	194640790	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_194642248_194644572_194644747_194646163_194646244_194648680_194648805_194650880_194651025_194651114_194651217_194652728_194653143_194658956_194659134_194660072_194660134_194665556_194665644_194666202_194666290_194666451_194666573_194670008_194670136_194672063
transcript_151313.nic	chr3	-	1833	13	ISM	ENSG00000041802.11	ENST00000265245.10	3283	14	-35	3810	-35	65	5prime_fragment	FALSE	canonical	0	0	junction_3	76.5711361342438	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCGTTGACAAAACTTTTT	-194661765	True	NA	NA	False	AATAAA	-43	NA	194672226	194644600	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_194644747_194646163_194646244_194648680_194648805_194650880_194651025_194651114_194651217_194652728_194653143_194658956_194659134_194660072_194660134_194665556_194665644_194666202_194666290_194666451_194666573_194670008_194670136_194672063
transcript_151324.known	chr3	-	1508	11	FSM	ENSG00000145014.18	ENST00000473092.5	1508	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	17.7620381713361	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACCGCGGCAGGAACTGAA	-194633286	False	NA	NA	False	NA	NA	NA	194633325	194588447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_194588640_194593040_194593071_194604286_194604446_194610915_194611021_194615568_194615698_194617098_194617270_194623223_194623311_194623528_194623696_194625896_194625991_194628382_194628510_194633078
transcript_151325.known	chr3	-	2490	11	FSM	ENSG00000145014.18	ENST00000392432.6	2490	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	17.917868176767	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGAGTGCAATGGCGAG	-194632646	True	NA	1	True	AATAAA	-25	NA	194633421	194587672	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_194588640_194604286_194604446_194610915_194611021_194615568_194615698_194617098_194617270_194617635_194617777_194623223_194623311_194623528_194623696_194625896_194625991_194628382_194628510_194633078
transcript_151331.known	chr3	-	2197	10	FSM	ENSG00000145014.18	ENST00000381975.7	2197	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	14.5143607047182	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTCACTGTGGAGTGCA	-194633242	False	NA	-7	True	AATAAA	-17	NA	194633281	194587680	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_194588640_194604286_194604442_194610915_194611021_194615568_194615698_194617098_194617270_194623223_194623311_194623528_194623696_194625896_194625991_194628382_194628510_194633078
transcript_151334.nic	chr3	-	2435	10	ISM	ENSG00000041802.11	ENST00000265245.10	3283	14	-12	9115	-12	811	5prime_fragment	FALSE	canonical	3	229	junction_8	14.742229591664	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAAGGTCTGAGATTTTA	-194661742	True	NA	NA	False	AAAAAG	-21	NA	194672203	194649905	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_194651025_194651114_194651217_194652728_194653143_194658956_194659134_194660072_194660134_194665556_194665644_194666202_194666290_194666451_194666573_194670008_194670136_194672063
transcript_151345.known	chr3	+	1119	4	FSM	ENSG00000231770.7	ENST00000453671.5	1119	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	3.74165738677394	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGAATCGAGTACTAAT	194583502	True	NA	17	True	AATAAA	-31	NA	194584010	194590260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_194584449_194589020_194589143_194589473_194589627_194589854
transcript_151346.known	chr3	+	1101	4	FSM	ENSG00000231770.7	ENST00000447982.7	1125	4	23	1	0	0	multi-exon	FALSE	canonical	2	6	junction_1	2.82842712474619	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTACTGATAATAACTGAAT	194583505	True	NA	6	True	AATAAA	-20	NA	194584013	194590249	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_194584449_194589024_194589143_194589473_194589627_194589854
transcript_151347.known	chr3	+	905	1	FSM	ENSG00000231770.7	ENST00000666676.1	905	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGAAATTTGTTTTTAT	194583495	True	NA	NA	False	AATGAA	-17	NA	194584003	194584908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_194584000_194584900
transcript_151348.known	chr3	+	3155	1	FSM	ENSG00000185112.6	ENST00000329759.6	3155	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGAGCGTCTGGAACTG	194685422	True	NA	71	True	AATAAA	-19	NA	194685882	194689037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_194685900_194689000
transcript_151353.known	chr3	-	865	4	FSM	ENSG00000173950.16	ENST00000429994.5	865	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	54.9808047311868	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGAAGGACAGGGTTCCTT	NA	False	NA	NA	False	NA	NA	NA	195247920	195069676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_195070112_195156448_195156582_195226708_195226857_195247771
transcript_151355.known	chr3	-	2714	4	FSM	ENSG00000173950.16	ENST00000310380.11	2714	4	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_2	6.18241233033047	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGATTCATGTTGTTT	-195270042	True	NA	-33	True	AATAAA	-14	NA	195271159	195068283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_195070112_195156448_195156582_195226708_195226857_195270554
transcript_151364.known	chr3	-	7093	23	FSM	ENSG00000114331.16	ENST00000326793.11	7093	23	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_12	18.4407135804277	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTTCATGGTGATTTAC	-195438702	True	NA	-8	True	AATAAA	-19	NA	195443020	195274744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_195279429_195285795_195285858_195289120_195289232_195291705_195291816_195292264_195292453_195294718_195294812_195295707_195295893_195297189_195297282_195301574_195301645_195301965_195302175_195306510_195306617_195307222_195307324_195308785_195308838_195320700_195320814_195326884_195326960_195333027_195333124_195336931_195336977_195342470_195342655_195345258_195345318_195381008_195381063_195381902_195382023_195392089_195392148_195442794
transcript_151370.nic	chr3	-	2913	22	ISM	ENSG00000114331.16	ENST00000326793.11	7093	23	-36	10583	-12	0	5prime_fragment	FALSE	canonical	3	100	junction_11	18.8670007902915	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCATGTGTCTGGCATAT	-195438738	True	NA	NA	False	TATAAA	-23	NA	195443056	195285327	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_195285858_195289120_195289232_195291705_195291816_195292264_195292453_195294718_195294812_195295707_195295893_195297189_195297282_195301574_195301645_195301965_195302175_195306510_195306617_195307222_195307324_195308785_195308838_195320700_195320814_195326884_195326960_195333027_195333124_195336931_195336977_195342470_195342655_195345258_195345318_195381008_195381063_195381902_195382023_195392089_195392148_195442794
transcript_151372.known	chr3	-	1647	18	FSM	ENSG00000114331.16	ENST00000635383.1	1647	18	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	38.8704707304875	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTAAATTTGGGCCAGG	-195442833	False	NA	NA	False	AAAAAG	-37	NA	195442853	195295759	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_195295893_195297189_195297282_195301574_195301645_195301965_195302175_195306510_195306617_195307222_195307324_195308785_195308838_195312946_195312968_195320700_195320814_195326884_195326960_195333027_195333124_195336931_195336977_195342470_195342655_195345258_195345318_195381008_195381063_195381902_195382023_195392089_195392148_195442794
transcript_151376.nic	chr3	-	2478	9	ISM	ENSG00000114331.16	ENST00000635383.1	1647	18	-258	29655	-67	917	5prime_fragment	FALSE	canonical	3	105	junction_5	18.8480768249708	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGTCCACTAAAAACTAAG	-195443072	True	NA	NA	False	NA	NA	NA	195443111	195325414	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_195326960_195333027_195333124_195336931_195336977_195342470_195342655_195345258_195345318_195381008_195381063_195381902_195382023_195392089_195392148_195442794
transcript_151381.nic	chr3	-	657	6	ISM	ENSG00000114331.16	ENST00000480906.5	1802	7	-68	6707	-67	0	5prime_fragment	FALSE	canonical	3	105	junction_2	20.1950488981829	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAAAAGAAAATGCGTT	-195443072	True	NA	24	True	AAAAAG	-6	NA	195443111	195342605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_195342655_195345258_195345318_195381008_195381063_195381902_195382023_195392089_195392148_195442794
transcript_151382.known	chr3	-	3386	6	FSM	ENSG00000184203.8	ENST00000618156.5	3386	6	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_5	29.0585615610959	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTGCCTGTGTGTGGATT	-195538662	True	NA	-8	True	AATAAA	-15	NA	195543325	195514427	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_195516943_195519017_195519186_195523691_195523787_195524818_195524897_195529793_195529902_195542903
transcript_151387.nic	chr3	-	731	4	ISM	ENSG00000184203.8	ENST00000618156.5	3386	6	-28	9264	0	4198	5prime_fragment	FALSE	canonical	3	297	junction_3	36.5543735033473	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTTATTTCCTTTACTG	-195538690	True	NA	0	True	AAGAAA	-43	NA	195543353	195523691	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_195523787_195524818_195524897_195529793_195529902_195542903
transcript_151392.known	chr3	+	4208	14	FSM	ENSG00000242086.8	ENST00000445430.5	4208	14	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	38.6590314164643	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTTTATTTCCAAATC	195655853	True	NA	15	True	AATAAA	-16	NA	195658076	195686140	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_195658166_195661755_195661842_195662570_195662734_195663623_195663768_195664085_195664251_195666065_195666215_195668518_195668642_195671131_195671301_195672483_195672680_195673817_195673988_195677726_195677849_195681189_195681302_195681535_195681667_195683751
transcript_151395.known	chr3	+	2131	14	FSM	ENSG00000242086.8	ENST00000429897.5	2131	14	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_13	39.3456838831998	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGGTGAAAGTAG	195655841	True	NA	NA	False	AATAAA	-11	NA	195658064	195688862	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_195658166_195661755_195661842_195662570_195662734_195664085_195664251_195666065_195666215_195668518_195668642_195671131_195671301_195672483_195672680_195673817_195673988_195677726_195677849_195681189_195681302_195681535_195681667_195683751_195683866_195688532
transcript_151411.known	chr3	-	548	5	FSM	ENSG00000185485.14	ENST00000435731.5	548	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	45.1829613903294	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTTTTGTGGAGTATTT	-195986027	True	NA	NA	False	NA	NA	NA	195990305	195982292	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_195982311_195984111_195984277_195985626_195985790_195986518_195986605_195990189
transcript_151417.known	chr3	-	5032	19	FSM	ENSG00000072274.13	ENST00000392396.7	5032	19	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_18	102.780240210742	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAATGAGTTCTGTCAT	-196070608	True	NA	NA	False	NA	NA	NA	196082090	196049475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196052185_196053417_196053559_196055079_196055302_196058283_196058366_196058573_196058633_196060179_196060248_196062581_196062646_196062853_196062940_196064308_196064429_196065442_196065601_196067517_196067658_196068031_196068131_196069454_196069569_196071395_196071499_196072002_196072153_196073929_196074126_196075158_196075361_196077063_196077123_196081830
transcript_151418.known	chr3	-	5012	19	FSM	ENSG00000072274.13	ENST00000360110.9	5012	19	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_10	30.937212400459	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTCATTTCTTTAGATAA	-196070608	True	NA	-2	True	AATAAA	-16	NA	196082090	196049283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196052185_196053417_196053559_196055079_196055302_196058283_196058366_196058573_196058633_196060179_196060248_196062581_196062646_196062853_196062940_196064308_196064429_196065442_196065601_196067517_196067658_196068031_196068131_196069454_196069569_196071395_196071499_196072002_196072153_196073929_196074126_196075158_196075361_196077063_196077123_196082042
transcript_151420.known	chr3	-	4814	18	FSM	ENSG00000072274.13	ENST00000420415.5	4814	18	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_16	107.07129856212	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTCATTTCTTTAGATAA	-196070612	True	NA	-2	True	AATAAA	-16	NA	196082094	196049283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196052185_196053417_196053559_196055079_196055302_196058283_196058366_196058573_196058633_196060179_196060248_196062581_196062646_196062853_196062940_196064308_196064429_196065442_196065601_196067517_196067658_196068031_196068131_196069454_196069569_196071395_196071499_196072002_196072153_196073929_196074126_196077063_196077123_196082042
transcript_15143.known	chr1	+	2163	8	FSM	ENSG00000160753.16	ENST00000292254.8	2163	8	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_5	41.5535062004522	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTTCACTGTGGG	155322421	True	NA	29	True	AATAAA	-15	NA	155324576	155331114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155324944_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326579_155327133_155328149_155328276_155330402
transcript_151430.known	chr3	-	5597	10	FSM	ENSG00000161217.12	ENST00000292823.6	5597	10	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_9	38.2186690854963	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCATGTCCAGTGGTGT	-196284632	True	NA	-2	True	AATAAA	-21	NA	196287713	196234367	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196238895_196239546_196239736_196241947_196242091_196242561_196242641_196247366_196247519_196248206_196248324_196257787_196257888_196270414_196270542_196283474_196283539_196287614
transcript_151431.nnic	chr3	-	2638	10	NNC	ENSG00000161217.12	novel	5546	9	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	29.535080627185	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTTCCATGTCCAGTGG	-196284667	True	NA	-5	True	AATAAA	-18	NA	196287748	196234370	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_196234865_196237791_196238895_196239546_196239736_196241947_196242091_196242561_196242641_196247366_196247519_196248206_196248324_196257787_196257888_196270414_196270542_196287614
transcript_151437.known	chr3	+	1430	9	FSM	ENSG00000163959.10	ENST00000296327.10	1430	9	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_6	3.69966214673719	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGGGCACCTTGCCTCT	196216357	True	NA	11	True	AATAAA	-23	NA	196216533	196233427	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_196216751_196217841_196217937_196226964_196227120_196227663_196227738_196228114_196228274_196228808_196228921_196229914_196230062_196232418_196232525_196233062
transcript_151438.known	chr3	-	5546	9	FSM	ENSG00000161217.12	ENST00000431016.6	5546	9	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_8	17.5979402203781	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCATGTCCAGTGGTGT	-196284645	True	NA	-2	True	AATAAA	-21	NA	196287726	196234367	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196238895_196239546_196239736_196241947_196242091_196242561_196242641_196247366_196247519_196248206_196248324_196257787_196257888_196270414_196270542_196287614
transcript_15144.known	chr1	+	2017	2	FSM	ENSG00000160752.15	ENST00000487002.1	2017	2	0	0	0	0	multi-exon	FALSE	canonical	3	2517	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	155287360	True	NA	NA	False	NA	NA	NA	155308913	155312979	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155310206_155312254
transcript_151451.known	chr3	-	603	5	FSM	ENSG00000213123.11	ENST00000426563.5	603	5	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	101.993872364961	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTGTGTTTTAGGCCTT	-196315754	True	NA	0	True	AATAAA	-25	NA	196318214	196291218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196291375_196296005_196296070_196306942_196307013_196316097_196316232_196318035
transcript_151454.nnic	chr3	-	642	4	NIC	ENSG00000213123.11	novel	603	5	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_1	118.643256117751	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTGTGTTTTAGGCCTT	-196315857	True	NA	0	True	AATAAA	-25	NA	196318317	196291218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_196291375_196306942_196307013_196316097_196316232_196318035
transcript_151456.known	chr3	-	625	5	FSM	ENSG00000213123.11	ENST00000325318.10	625	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	120.759057631302	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTGTGTTTTAGGCCTT	-196315780	True	NA	0	True	AATAAA	-25	NA	196318240	196291218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196291375_196296005_196296070_196306942_196307013_196316097_196316232_196318039
transcript_151458.known	chr3	-	10521	11	FSM	ENSG00000163960.12	ENST00000296328.9	10521	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_8	8.33306666239986	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTTTTTTTTGTGTTGTT	-196421959	True	NA	-7	True	AATAAA	-19	NA	196432427	196347661	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196356847_196361843_196361924_196362293_196362688_196368027_196368156_196369420_196369512_196371895_196372043_196391812_196391926_196393553_196393620_196402951_196403020_196407245_196407394_196432326
transcript_151463.known	chr3	-	3158	10	FSM	ENSG00000163960.12	ENST00000429160.1	3158	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	12.1847911677824	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAATTGTATAAATATTT	-196421959	True	NA	NA	False	NA	NA	NA	196432427	196354876	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196356847_196361843_196361924_196362293_196362688_196368027_196368156_196369420_196369512_196371895_196372043_196391812_196391926_196393553_196393620_196402951_196403020_196432326
transcript_151466.known	chr3	-	921	4	FSM	ENSG00000163960.12	ENST00000493566.1	921	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	19.1543438647449	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTTTTGACCTCTGTTTC	-196421959	True	NA	NA	False	NA	NA	NA	196432427	196400128	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196400733_196402951_196403020_196407245_196407394_196432326
transcript_151469.known	chr3	-	5347	6	FSM	ENSG00000163961.4	ENST00000318037.3	5347	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	4.87442304278158	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTATTATGTGTATTTT	-196498445	True	NA	-16	True	AATAAA	-17	NA	196503768	196468782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196472773_196475230_196475313_196483769_196483892_196487398_196487579_196488606_196488684_196502872
transcript_15147.nic	chr1	-	2499	4	NIC	ENSG00000116539.14	novel	5489	6	NA	NA	-55	-20934	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	1.24721912892465	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGAAAACCTCGGTGGAC	-155560737	True	NA	NA	False	ATTAAA	-11	NA	155562896	155480730	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_155482450_155521099_155521619_155562152_155562296_155562778
transcript_151471.nic	chr3	-	1354	4	ISM	ENSG00000163961.4	ENST00000318037.3	5347	6	-97	15005	-97	-12028	5prime_fragment	FALSE	canonical	3	11	junction_1	6.12825877028341	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGGAGATATTCAGAAGT	NA	False	NA	NA	False	AAGAAA	-21	NA	196503865	196483787	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_196483892_196487398_196487579_196488606_196488684_196502872
transcript_151473.nic	chr3	-	1167	3	ISM	ENSG00000163961.4	ENST00000318037.3	5347	6	-97	18699	-97	-15722	5prime_fragment	FALSE	canonical	3	24	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAGGCAGAAAAAAGGCGA	NA	False	NA	-4	True	AATACA	-40	NA	196503865	196487481	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_196487579_196488606_196488684_196502872
transcript_151474.nic	chr3	-	1112	3	ISM	ENSG00000163961.4	ENST00000318037.3	5347	6	-97	18754	-97	-15777	5prime_fragment	FALSE	canonical	3	24	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAGTGAAGAATACATACA	NA	False	NA	-59	True	AAGAAA	-6	NA	196503865	196487536	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_196487579_196488606_196488684_196502872
transcript_151480.known	chr3	-	1594	4	FSM	ENSG00000185798.8	ENST00000332629.7	1594	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	35.6495285928003	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTTTTTCAGATTAAAAAA	-196567622	True	NA	-5	True	AATAAA	-25	NA	196568554	196554176	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196554808_196560995_196561492_196566876_196567308_196568518
transcript_151482.known	chr3	+	3689	3	FSM	ENSG00000174013.8	ENST00000440469.1	3689	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	81.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGTTAATGTCATTTC	NA	False	NA	8	True	ATTAAA	-18	NA	196568610	196587287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_196568788_196577452_196577810_196584132
transcript_151486.nnic	chr3	-	1163	3	NIC	ENSG00000185798.8	novel	1594	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	34	junction_2	31.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTTTTTCAGATTAAAAAA	-196567622	True	NA	-5	True	AATAAA	-25	NA	196568554	196554176	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_-_196554808_196560995_196561492_196568518
transcript_151488.known	chr3	-	683	2	FSM	ENSG00000185798.8	ENST00000429115.1	683	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGGCAAAACTGTTTTTC	-196567649	True	NA	-16	True	AATAAA	-14	NA	196568581	196554187	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196554808_196568518
transcript_151496.known	chr3	+	953	7	FSM	ENSG00000163964.18	ENST00000296333.10	953	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	66.1070260175792	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTATGTAGTTAAATGCT	196710745	True	NA	-51	True	NA	NA	NA	196712410	196733902	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_196712645_196716857_196716922_196722414_196722557_196727922_196728137_196728701_196728756_196730991_196731093_196733758
transcript_151499.nic	chr3	+	2186	6	NIC	ENSG00000163964.18	novel	1677	8	NA	NA	-84	302	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	48.8794435320207	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTTGGATGAAAATCATG	NA	False	NA	-8	True	AATAAA	-2	NA	196712292	196734591	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_196713125_196716857_196716922_196722414_196722557_196727922_196728137_196730991_196731093_196733758
transcript_151500.nic	chr3	+	2493	6	NIC	ENSG00000163964.18	novel	1677	8	NA	NA	-84	609	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	48.8794435320207	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTGGAATCATCAGGTAA	NA	False	NA	NA	False	AATAAA	-16	NA	196712292	196734898	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr3_+_196713125_196716857_196716922_196722414_196722557_196727922_196728137_196730991_196731093_196733758
transcript_151502.known	chr3	+	3038	6	FSM	ENSG00000163964.18	ENST00000392391.9	3038	6	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	20.6339526024463	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGATATAACTCTTCTTG	196710711	True	NA	9	True	AATAAA	-18	NA	196712376	196736007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_196712645_196716857_196716922_196722414_196722557_196727922_196728137_196730991_196731093_196733758
transcript_151509.known	chr3	+	523	5	FSM	ENSG00000163964.18	ENST00000457284.5	523	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	60.377976117124	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTGTGCACTGCCGC	196712527	False	NA	NA	False	NA	NA	NA	196712559	196728037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_196712645_196716857_196716922_196722414_196722557_196726654_196726772_196727922
transcript_15151.nic	chr1	-	2890	3	ISM	ENSG00000116539.14	ENST00000676814.1	12184	29	-1	145463	-1	-20934	5prime_fragment	FALSE	canonical	1	1	junction_2	1.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGAAAACCTCGGTGGAC	-155560645	True	NA	NA	False	ATTAAA	-11	NA	155562804	155480730	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_155482450_155521099_155521619_155562152
transcript_151510.known	chr3	+	838	4	FSM	ENSG00000163964.18	ENST00000451319.1	838	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	56.8409085860605	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTGTTGATGTTTTGTG	196712664	False	NA	NA	False	NA	NA	NA	196712680	196728110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_196713125_196716857_196716922_196722414_196722557_196727922
transcript_151511.known	chr3	+	677	4	FSM	ENSG00000163964.18	ENST00000421265.5	677	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	24.5537958142705	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCATCTGCCATCCCTGT	196712570	False	NA	NA	False	AATAAA	-16	NA	196712602	196728351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_196712645_196716857_196716922_196722414_196722557_196727922
transcript_151512.known	chr3	+	2556	3	FSM	ENSG00000174004.6	ENST00000328557.5	2556	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGCTTGTGTTTTTTTTT	196639449	True	NA	NA	False	AATAAA	-36	NA	196639693	196662004	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_196639876_196654526_196654648_196659751
transcript_151513.known	chr3	-	2158	3	FSM	ENSG00000174007.9	ENST00000409690.5	2158	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	3	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGTTTCTACCTGTTC	-196712080	True	NA	NA	False	AATAAA	-15	NA	196712250	196706276	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196707913_196708527_196708728_196711928
transcript_151518.known	chr3	+	6139	15	FSM	ENSG00000180370.10	ENST00000327134.7	6139	15	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_9	17.1899650365899	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTTGTGCCATCATTTT	196732994	True	NA	NA	False	GATAAA	-18	NA	196739856	196832647	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_196740158_196782625_196782834_196801926_196802028_196803016_196803165_196805351_196805384_196806578_196806687_196807781_196807915_196810589_196810654_196812218_196812268_196812738_196812852_196814450_196814569_196818056_196818157_196820370_196820568_196827195_196827334_196828318
transcript_15152.nic	chr1	-	2304	3	ISM	ENSG00000116539.14	ENST00000679133.1	11431	28	-3	145430	-3	-20934	5prime_fragment	FALSE	canonical	1	4	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGAAAACCTCGGTGGAC	-155560685	True	NA	NA	False	ATTAAA	-11	NA	155562844	155480730	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_155482450_155521099_155521619_155562778
transcript_151525.nic	chr3	+	1177	8	ISM	ENSG00000180370.10	ENST00000327134.7	6139	15	-111	22023	-111	2580	5prime_fragment	FALSE	canonical	3	190	junction_2	12.4899959967968	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATACAAGATATGAAAAAAT	NA	False	NA	-4	True	AAGAAA	-4	NA	196739745	196810624	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_196740158_196782625_196782834_196801926_196802028_196803016_196803165_196805351_196805384_196806578_196806687_196807781_196807915_196810589
transcript_151526.nic	chr3	+	963	7	ISM	ENSG00000180370.10	ENST00000327134.7	6139	15	27	24774	27	-171	5prime_fragment	FALSE	canonical	3	190	junction_2	13.3749350984926	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGACTAAGATGACAGATG	196733021	True	NA	NA	False	NA	NA	NA	196739883	196807873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_196740158_196782625_196782834_196801926_196802028_196803016_196803165_196805351_196805384_196806578_196806687_196807781
transcript_151528.nic	chr3	+	508	2	ISM	ENSG00000180370.10	ENST00000327134.7	6139	15	-6	49821	-6	-25218	5prime_fragment	FALSE	canonical	3	220	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAAGGTAAATAGCGCTT	196732988	True	NA	0	True	CATAAA	-25	NA	196739850	196782826	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_196740158_196782625
transcript_151529.known	chr3	+	6244	10	FSM	ENSG00000119231.11	ENST00000323460.10	6244	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	4.50788061668907	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTCTCTCGTCTTGA	196863528	True	NA	8	True	AATAAA	-18	NA	196867919	196934714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_196868074_196885150_196886695_196899665_196899772_196899923_196900063_196900364_196900413_196903532_196903611_196923413_196923552_196927795_196927880_196929632_196929684_196930812
transcript_15153.known	chr1	-	11457	28	FSM	ENSG00000116539.14	ENST00000677213.1	11457	28	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_27	2.81968389787767	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAAAAACTTTTCCTAAC	-155563148	False	NA	-24	True	ATTAAA	-1	NA	155563162	155335286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155337752_155338088_155338391_155339327_155339369_155341935_155342103_155343313_155343487_155343603_155343743_155344182_155344274_155346382_155346470_155347655_155347905_155349326_155349460_155349541_155349597_155352705_155352859_155354472_155354631_155357315_155357411_155357584_155357750_155360300_155360410_155370503_155370651_155370776_155370984_155378280_155378390_155378502_155378549_155380042_155380117_155395458_155395554_155415743_155415924_155438326_155439069_155459796_155459899_155477885_155482450_155521099_155521619_155563072
transcript_151531.known	chr3	+	2491	9	FSM	ENSG00000119231.11	ENST00000445299.6	2491	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	11.7046999107196	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTATTGTTACCTCAAAT	196863464	True	NA	NA	False	NA	NA	NA	196867855	196931035	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_196868074_196885150_196886695_196899665_196899772_196899923_196900063_196900364_196900413_196903532_196903611_196927795_196927880_196929632_196929684_196930812
transcript_151533.nnic	chr3	+	2237	7	NNC	ENSG00000119231.11	novel	2491	9	NA	NA	14	2535	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	12.6051136007927	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGCAAAAAAGATCTCATAA	196863478	True	NA	NA	False	CATAAA	-45	NA	196867869	196907759	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_196868074_196885150_196886695_196899665_196899772_196899923_196900063_196900364_196900413_196903532_196903611_196907641
transcript_151543.known	chr3	-	564	5	FSM	ENSG00000114503.11	ENST00000411704.1	564	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	441.269404672474	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAACCAGTGAGTGGTGAG	-196932567	True	NA	NA	False	NA	NA	NA	196942436	196937022	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196937083_196937509_196937649_196939250_196939433_196941486_196941603_196942369
transcript_151546.known	chr3	-	1946	4	FSM	ENSG00000114503.11	ENST00000427641.2	1946	4	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	396.615963145991	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTTTCAATAAAGCTGGAT	-196932691	True	NA	7	True	NA	NA	NA	196942560	196935433	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196937083_196937509_196937632_196939392_196939433_196942425
transcript_151548.known	chr3	-	1133	4	FSM	ENSG00000114503.11	ENST00000452404.6	1133	4	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	385.344867186092	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGTTCTTTGACAACA	-196932571	True	NA	62	True	NA	NA	NA	196942440	196936776	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196937083_196937509_196937649_196939250_196939433_196941934
transcript_151549.known	chr3	-	2216	4	FSM	ENSG00000114503.11	ENST00000447325.5	2216	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	412.17067662155	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGTTGCTGCCTGTTTCC	-196942365	False	NA	-8	True	AATAAA	-16	NA	196942377	196935405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196937083_196937509_196937649_196939250_196939433_196942159
transcript_151550.known	chr3	-	2220	4	FSM	ENSG00000114503.11	ENST00000428425.1	2220	4	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_3	377.345406167288	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCGTTGTTGCTGCCTGTT	-196942582	False	NA	-11	True	AATAAA	-13	NA	196942594	196935408	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196937083_196937509_196937649_196939250_196939433_196942369
transcript_151551.known	chr3	-	2101	4	FSM	ENSG00000114503.11	ENST00000321256.10	2101	4	0	0	0	0	multi-exon	FALSE	canonical	3	866	junction_2	22.8619042659763	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGTTGCTGCCTGTTTCC	-196932659	True	NA	-8	True	AATAAA	-16	NA	196942528	196935405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196937083_196937509_196937649_196939250_196939433_196942425
transcript_151554.known	chr3	-	669	2	FSM	ENSG00000114503.11	ENST00000482976.1	669	2	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAACCCTGTGGGTGTGCG	-196932639	True	NA	NA	False	NA	NA	NA	196942508	196938902	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196939433_196942369
transcript_151555.known	chr3	-	4161	2	FSM	ENSG00000114503.11	ENST00000463783.1	4161	2	0	0	0	0	multi-exon	FALSE	canonical	3	894	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTTGTTGCTGCCTGTTTC	-196932691	True	NA	-9	True	AATAAA	-15	NA	196942560	196935406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196939433_196942425
transcript_151556.known	chr3	+	870	1	FSM	ENSG00000270170.2	ENST00000602845.2	870	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	638	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTCTGTGCTGGGACTTG	196932528	True	NA	20	True	AATAAA	-20	NA	196942673	196943543	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_196942700_196943500
transcript_151557.known	chr3	-	868	2	FSM	ENSG00000119227.8	ENST00000238138.2	868	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGACTTCCCATGGGAACA	NA	False	NA	NA	False	AATACA	-24	NA	196969060	196951537	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_196952032_196968686
transcript_151561.known	chr3	-	4436	25	FSM	ENSG00000075711.21	ENST00000657381.1	4436	25	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_24	66.8908729864463	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCATTCCATTTATGAAG	-197296984	True	NA	45	True	NA	NA	NA	197298623	197042984	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197076585_197076683_197081050_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197149742_197149797_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197298535
transcript_151583.known	chr3	-	3527	8	FSM	ENSG00000161267.12	ENST00000392379.6	3527	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_7	57.0864006822741	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGAGTTGCACGTGTG	NA	False	NA	-7	True	ATTAAA	-15	NA	197555968	197509782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_197512365_197514263_197514417_197522639_197522782_197532411_197532523_197533488_197533562_197546360_197546487_197554561_197554714_197555780
transcript_151586.known	chr3	-	3455	7	FSM	ENSG00000161267.12	ENST00000392378.6	3455	7	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_6	12.4152683776425	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGAGTTGCACGTGTG	NA	False	NA	-7	True	ATTAAA	-15	NA	197556048	197509782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_197512365_197514263_197514417_197522639_197522782_197532411_197532523_197533488_197533562_197546360_197546487_197555780
transcript_151587.known	chr3	-	1605	7	FSM	ENSG00000161267.12	ENST00000441275.5	1605	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	70.9023193477399	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCTCATTTGATCCTTAA	NA	False	NA	-25	True	ATTAAA	-4	NA	197555987	197511593	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_197512365_197514263_197514417_197522639_197522782_197532411_197532515_197533484_197533562_197554561_197554714_197555780
transcript_151588.known	chr3	-	868	6	FSM	ENSG00000161267.12	ENST00000446746.5	868	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	56.1854073581388	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGCCATCGCCAAGAAGAT	NA	False	NA	NA	False	NA	NA	NA	197555972	197512167	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_197512365_197514263_197514417_197522639_197522782_197532411_197532523_197533488_197533562_197555780
transcript_151609.nnic	chr3	-	1350	9	NNC	ENSG00000214135.9	novel	2435	7	NA	NA	-1	-1029	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	49.7655440540943	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTTCCTGTCTAACTG	-197623520	True	NA	-20	True	AATAAA	-11	NA	197627907	197612600	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_197612776_197613100_197613319_197615563_197615686_197619739_197619889_197621703_197621869_197622186_197622331_197623219_197623383_197624111_197624198_197627779
transcript_151611.nnic	chr3	-	2654	9	NNC	ENSG00000214135.9	novel	1555	8	NA	NA	-1	-1029	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	47.9107242692072	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTTCCTGTCTAACTG	-197623520	True	NA	-20	True	AATAAA	-11	NA	197627907	197612600	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_-_197612776_197613100_197614623_197615563_197615686_197619739_197619889_197621703_197621869_197622186_197622331_197623219_197623383_197624111_197624198_197627779
transcript_151620.known	chr3	-	1552	8	FSM	ENSG00000214135.9	ENST00000418868.6	1555	8	3	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	38.0879754981939	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTCTCAGATATTCAGGG	-197623519	True	NA	NA	False	AATAAA	-20	NA	197627906	197614026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_197614623_197615563_197615686_197619739_197619889_197621703_197621869_197622186_197622331_197623219_197623383_197624111_197624198_197627779
transcript_151645.known	chr3	-	1503	7	FSM	ENSG00000214135.9	ENST00000449003.6	2435	7	0	932	0	-696	multi-exon	FALSE	canonical	3	66	junction_3	33.5927406179106	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGTCTTGCCCAATGTT	-197623484	True	NA	NA	False	TTTAAA	-25	NA	197627871	197614981	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_197615686_197619739_197619889_197621703_197621869_197622186_197622331_197623219_197623383_197624111_197624198_197627779
transcript_151664.known	chr3	-	9255	20	FSM	ENSG00000145016.16	ENST00000296343.10	9255	20	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	5.19161907185587	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTCTTTTCCTTGAAAT	-197734993	True	NA	-7	True	ATTAAA	-13	NA	197736904	197668866	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_197675197_197675421_197675516_197676884_197677039_197677479_197677542_197681128_197681368_197681834_197681900_197682469_197682616_197683306_197683440_197684156_197684218_197693714_197693817_197694374_197694586_197695865_197695982_197696953_197697050_197700612_197701147_197701707_197701865_197703547_197703655_197704541_197704702_197705091_197705176_197717976_197718131_197736654
transcript_151673.nic	chr3	-	3524	18	ISM	ENSG00000145016.16	ENST00000296343.10	9255	20	-25	7350	-16	0	5prime_fragment	FALSE	canonical	3	27	junction_1	4.89756665799968	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCCTCGATTTTCTTGG	-197735018	False	NA	-2	True	AATAAA	-15	NA	197736929	197676216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_-_197677039_197677479_197677542_197681128_197681368_197681834_197681900_197682469_197682616_197683306_197683440_197684156_197684218_197693714_197693817_197694374_197694586_197695865_197695982_197696953_197697050_197700612_197701147_197701707_197701865_197703547_197703655_197704541_197704702_197705091_197705176_197717976_197718131_197736654
transcript_151677.known	chr3	+	6733	9	FSM	ENSG00000122068.13	ENST00000241502.9	6733	9	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_4	24.4792641842029	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACACTGTATCAATTGCTA	197747074	True	NA	5	True	AATAAA	-17	NA	197749882	197787596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_197750075_197756425_197756558_197768438_197768588_197770131_197770245_197773402_197773500_197774148_197774211_197776926_197777002_197778337_197778465_197781810
transcript_151680.known	chr3	+	1758	9	FSM	ENSG00000122068.13	ENST00000424384.2	1758	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	93.2734554951193	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAACAATGTATTAGAATT	197750374	False	NA	NA	False	NA	NA	NA	197750389	197782380	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_197750823_197756425_197756558_197768438_197768588_197770131_197770245_197773402_197773500_197774148_197774211_197776926_197777002_197778337_197778465_197781810
transcript_151683.known	chr3	-	1603	7	FSM	ENSG00000145016.16	ENST00000449205.1	1603	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	4.92442890089805	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGAGACTCAAAATCTCT	-197734997	True	NA	NA	False	AATGAA	-18	NA	197736908	197700459	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_197701147_197701707_197701865_197703547_197703655_197704541_197704702_197705091_197705176_197717976_197718131_197736654
transcript_151685.nic	chr3	+	636	4	ISM	ENSG00000122068.13	ENST00000241502.9	6733	9	-50	17352	-45	83	5prime_fragment	FALSE	canonical	3	261	junction_2	20.154955277108	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTGCTCAAAAATAATA	197747024	True	NA	NA	False	NA	NA	NA	197749832	197770244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr3_+_197750075_197756425_197756558_197768438_197768588_197770131
transcript_151686.known	chr3	-	416	2	FSM	ENSG00000145016.16	ENST00000472149.1	416	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAAAATTAGCCGGGC	-197749295	False	NA	NA	False	AATAAA	-13	NA	197749347	197748108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_197748446_197749268
transcript_15169.known	chr1	+	2438	14	FSM	ENSG00000125459.17	ENST00000649846.1	2438	14	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_11	74.0351747522197	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATTGATTTGCAAAATC	155610162	True	NA	11	True	NA	NA	NA	155610217	155614933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155610333_155610424_155610561_155611038_155611109_155611215_155611292_155611548_155611604_155611688_155611828_155611982_155612101_155612181_155612317_155612417_155612571_155612843_155612976_155613048_155613234_155613424_155613567_155613656_155613767_155614061
transcript_151691.nnic	chr3	+	3213	22	NNC	ENSG00000186001.14	novel	7394	22	NA	NA	0	1833	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_21	41.1414241373017	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTTGTTTCTGTAGTT	197783368	True	NA	9	True	AATAAA	-15	NA	197791225	197885831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_197791541_197814907_197815053_197817175_197817303_197820324_197820431_197826877_197827015_197829563_197829674_197830769_197830864_197832196_197832318_197835673_197835823_197839320_197839398_197847408_197847461_197847871_197848022_197852560_197852621_197854391_197854446_197858833_197858906_197865422_197865472_197866111_197866220_197870159_197870279_197871324_197871463_197875697_197875776_197883540_197884169_197885507
transcript_151694.nnic	chr3	+	3294	22	NNC	ENSG00000186001.14	novel	7394	22	NA	NA	0	1833	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	47.5911346762529	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTTGTTTCTGTAGTT	197783368	True	NA	9	True	AATAAA	-15	NA	197791225	197885831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_197791541_197814907_197815053_197817175_197817303_197820324_197820431_197826877_197827015_197829563_197829674_197830769_197830864_197832196_197832318_197835673_197835823_197839320_197839398_197847408_197847461_197847871_197848022_197852560_197852621_197854391_197854446_197858833_197858906_197865422_197865472_197866111_197866220_197870159_197870279_197871324_197871463_197875697_197875776_197883540_197884250_197885507
transcript_151699.known	chr3	+	5109	21	FSM	ENSG00000186001.14	ENST00000428136.2	5109	21	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_20	44.7216670082858	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTCTAACTCATATTTAC	197783385	True	NA	9	True	AATAAA	-24	NA	197791242	197883376	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_197791541_197814907_197815053_197817175_197817303_197820324_197820431_197826877_197827015_197829563_197829674_197830769_197830864_197832196_197832318_197835673_197835823_197839320_197839398_197847408_197847461_197847871_197848022_197852560_197852621_197854391_197854446_197858833_197858906_197865422_197865472_197866111_197866220_197870159_197870279_197871324_197871463_197875697_197875776_197880511
transcript_151700.known	chr3	+	7129	21	FSM	ENSG00000186001.14	ENST00000425562.7	7129	21	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_20	32.7939018721469	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATTGGAGCGTGTTCAT	197783396	True	NA	11	True	AATAAA	-30	NA	197791253	197888436	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_197791541_197814907_197815053_197817175_197817303_197820324_197820431_197826877_197827015_197829563_197829674_197830769_197830864_197832196_197832318_197835673_197835823_197839320_197839398_197847408_197847461_197847871_197848022_197852560_197852621_197854391_197854446_197858833_197858906_197865422_197865472_197866111_197866220_197870159_197870279_197871324_197871463_197875697_197875776_197883540
transcript_151703.nnic	chr3	+	3141	21	NNC	ENSG00000186001.14	novel	7129	21	NA	NA	0	1833	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_14	49.2238763203387	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTTGTTTCTGTAGTT	197783368	True	NA	9	True	AATAAA	-15	NA	197791225	197885831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_197791541_197814907_197815053_197817175_197817303_197820324_197820431_197826877_197827015_197829563_197829674_197830769_197830864_197832196_197832318_197835673_197835823_197839320_197839398_197847408_197847461_197847871_197848022_197852560_197852621_197854391_197854446_197865422_197865472_197866111_197866220_197870159_197870279_197871324_197871463_197875697_197875776_197883540_197884169_197885507
transcript_151706.nnic	chr3	+	3222	21	NNC	ENSG00000186001.14	novel	7129	21	NA	NA	0	1833	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	54.8870658716605	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTTGTTTCTGTAGTT	197783368	True	NA	9	True	AATAAA	-15	NA	197791225	197885831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_197791541_197814907_197815053_197817175_197817303_197820324_197820431_197826877_197827015_197829563_197829674_197830769_197830864_197832196_197832318_197835673_197835823_197839320_197839398_197847408_197847461_197847871_197848022_197852560_197852621_197854391_197854446_197865422_197865472_197866111_197866220_197870159_197870279_197871324_197871463_197875697_197875776_197883540_197884250_197885507
transcript_151720.known	chr3	+	2258	19	FSM	ENSG00000186001.14	ENST00000334859.8	2258	19	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_14	29.1461303362942	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGGTCTCACTTCTAC	197783416	True	NA	NA	False	TATAAA	-16	NA	197791273	197871585	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_197791541_197814907_197815053_197817175_197817303_197820324_197820431_197826877_197827015_197829563_197829674_197830769_197830864_197832196_197832318_197835673_197835823_197839320_197839398_197847408_197847461_197847871_197848022_197852560_197852621_197854391_197854446_197858833_197858906_197865422_197865472_197866111_197866220_197870159_197870279_197871324
transcript_15174.known	chr1	+	2422	14	FSM	ENSG00000125459.17	ENST00000245564.8	2422	14	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_13	33.9899045227764	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGTTTATTCCACACA	155610162	True	NA	29	True	NA	NA	NA	155610217	155614951	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155610333_155610424_155610561_155611038_155611109_155611215_155611292_155611548_155611604_155611688_155611828_155611982_155612101_155612181_155612317_155612417_155612571_155612843_155612976_155613048_155613234_155613461_155613567_155613656_155613767_155614058
transcript_151741.known	chr3	+	7394	22	FSM	ENSG00000186001.14	ENST00000438796.6	7394	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	55.5205830966525	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATTGGAGCGTGTTCAT	197783377	True	NA	11	True	AATAAA	-30	NA	197791234	197888436	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_197791541_197814907_197815053_197817175_197817303_197820324_197820431_197826877_197827015_197829563_197829674_197830769_197830864_197832196_197832318_197835673_197835823_197839320_197839398_197847408_197847461_197847871_197848022_197852560_197852621_197854391_197854446_197858833_197858906_197865422_197865472_197866111_197866220_197870159_197870279_197871324_197871463_197875697_197875776_197880511_197880758_197883540
transcript_151746.known	chr3	-	555	1	FSM	ENSG00000234742.1	ENST00000452862.1	555	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCAGCATTAAAATAAATG	NA	False	NA	NA	False	AAGAAA	-34	NA	197850954	197850399	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_197850400_197851000
transcript_151747.known	chr3	-	1981	11	FSM	ENSG00000114473.14	ENST00000455191.5	1981	11	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	10.4899952335547	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTATCGTCACTTTGGTG	-197949269	True	NA	-1	True	AATAAA	-24	NA	197949925	197889076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_197889715_197891445_197891548_197892627_197892760_197912674_197912750_197913880_197914043_197926023_197926106_197932173_197932303_197938547_197938781_197943777_197944052_197945619_197945687_197949838
transcript_151754.known	chr3	+	442	5	FSM	ENSG00000182899.17	ENST00000429437.5	442	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	5942.74433132539	2469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAGTGGATTAAAAAA	197796444	True	NA	14	True	AATAAA	-25	NA	197950205	197955817	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_197950222_197950935_197950979_197951158_197951329_197954002_197954148_197955749
transcript_151755.known	chr3	+	553	5	FSM	ENSG00000182899.17	ENST00000448864.6	553	5	0	0	0	0	multi-exon	FALSE	canonical	3	4178	junction_1	5052.48223648535	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTTGCTACATGCTTAA	197796428	True	NA	48	True	ATTAAA	-18	NA	197950189	197955851	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_197950300_197950935_197950979_197951158_197951312_197954002_197954148_197955749
transcript_151761.known	chr3	+	677	4	FSM	ENSG00000182899.17	ENST00000485439.5	677	4	0	0	0	0	multi-exon	FALSE	canonical	3	8323	junction_1	3887.9669351589	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCCAAGTAGCTGGGAC	197796428	True	NA	NA	False	NA	NA	NA	197950189	197954451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_197950222_197950935_197950979_197951158_197951312_197954002
transcript_151767.known	chr3	+	564	5	FSM	ENSG00000182899.17	ENST00000439255.1	564	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	7108.57890158082	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAGTGGATTAAAAAA	197950810	False	NA	14	True	AATAAA	-25	NA	197950953	197955817	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_197950979_197951158_197951312_197953487_197953661_197954002_197954148_197955749
transcript_151768.known	chr3	-	559	4	FSM	ENSG00000114473.14	ENST00000463651.1	559	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	23.7907545067406	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACACAGAGGCCGGTTC	-197949269	True	NA	NA	False	NA	NA	NA	197949925	197938665	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_-_197938776_197943756_197944052_197945619_197945687_197949838
transcript_151770.known	chr3	+	2423	17	FSM	ENSG00000185621.11	ENST00000420910.6	2423	17	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_16	6.07119222229045	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCAACCACCTCATCAGC	197959628	True	NA	NA	False	NA	NA	NA	197960221	198039011	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_197960441_197974376_197974475_197975041_197975073_197976028_197976112_197976597_197976716_197980325_197980505_197983942_197984049_197985795_197985891_197990558_197990677_197996174_197996283_197999265_197999343_198003014_198003126_198019252_198019386_198021445_198021606_198024657_198024789_198035832_198036044_198038566
transcript_151771.known	chr3	+	7043	16	FSM	ENSG00000185621.11	ENST00000330198.8	7043	16	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_11	6.58078009560163	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCATCCTGTCTTTATTT	197959606	True	NA	NA	False	AATAAA	-13	NA	197960199	198043720	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_197960441_197974376_197974475_197975041_197975073_197976028_197976112_197976597_197976716_197980325_197980505_197983942_197984049_197985795_197985891_197990558_197990677_197996174_197996283_197999265_197999343_198019252_198019386_198021445_198021606_198024657_198024789_198035832_198036044_198038566
transcript_151772.known	chr3	+	5998	16	FSM	ENSG00000185621.11	ENST00000451139.6	5998	16	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_15	6.23823336815445	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTGATGTCTCCCGTC	197959623	True	NA	NA	False	GATAAA	-33	NA	197960216	198042095	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr3_+_197960441_197974376_197974475_197975041_197975073_197976028_197976716_197980325_197980505_197983942_197984049_197985795_197985891_197990558_197990677_197996174_197996283_197999265_197999343_198003014_198003126_198019252_198019386_198021445_198021606_198024657_198024789_198035832_198036044_198038566
transcript_151778.nnic	chr3	+	1957	4	NNC	ENSG00000236438.7	novel	1141	4	NA	NA	4128	1872	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_3	14.2672897060218	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTTGTGGTCTGTGCTT	NA	False	NA	NA	False	AATAAA	-13	NA	198157414	198171931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr3_+_198157670_198167675_198167872_198169784_198169873_198170513
transcript_151780.known	chr4	+	2872	4	FSM	ENSG00000272602.6	ENST00000610261.6	2872	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	5.24933858267454	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGGAGTTAAATATGTAAA	49648	True	NA	NA	False	AATAAA	-23	NA	53320	88208	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_53492_59429_59557_60057_60154_85730
transcript_151782.known	chr4	+	747	3	FSM	ENSG00000272602.6	ENST00000502981.2	747	3	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAAAATACGTAAGGTGAG	49656	True	NA	NA	False	NA	NA	NA	53328	60514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_53492_59429_59557_60057
transcript_151795.nnic	chr4	+	1575	4	NNC	ENSG00000250312.8	novel	2772	4	NA	NA	-33	-27980	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	16.8193010820572	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAATTGTTTCTTTTTTG	120888	True	NA	NA	False	ATTAAA	-26	NA	124467	134721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_+_125297_126847_126922_127007_127128_134169
transcript_151805.known	chr4	+	2598	2	FSM	ENSG00000198155.5	ENST00000356347.3	2598	2	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAGATGCAAGTTCACA	209618	True	NA	92	True	TATAAA	-15	NA	212609	255985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_212782_253559
transcript_151810.nnic	chr4	-	1464	4	NNC	ENSG00000186777.12	novel	2179	3	NA	NA	-31	23664	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_1	17.4610678049451	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTTATACTCTTTCCCT	-299902	True	NA	-8	True	TTTAAA	-6	NA	305505	247010	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_248054_295437_295534_296028_296156_305307
transcript_151812.known	chr4	-	2346	4	FSM	ENSG00000186777.12	ENST00000419098.6	2346	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	45.2621990922521	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAATCTGGCAAAGTCAT	-299871	True	NA	NA	False	AATAAA	-40	NA	305474	270674	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_272631_295437_295534_296028_296156_305307
transcript_151816.known	chr4	+	12601	4	FSM	ENSG00000131127.14	ENST00000240499.8	12601	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	9.0921211313239	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTGATGTCTGTGTGCC	337441	True	NA	17	True	AATAAA	-20	NA	337813	384868	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_337987_343781_343909_344334_344431_372663
transcript_151825.known	chr4	-	1423	4	FSM	ENSG00000251595.7	ENST00000514396.5	1423	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	133.382490938237	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATTGATATAACAGTTC	-465618	False	NA	NA	False	NA	NA	NA	474051	425814	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_426974_437445_437512_472574_472702_473980
transcript_151828.known	chr4	-	664	3	FSM	ENSG00000182903.16	ENST00000505900.1	664	3	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_1	25.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATTCATGCTGGAGAGAA	-465734	True	NA	NA	False	CATAAA	-1	NA	474167	444082	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_444433_472574_472702_473980
transcript_151842.known	chr4	+	3203	13	FSM	ENSG00000174227.16	ENST00000310340.9	3203	13	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_7	38.9025670389786	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGTATCATATTTTCC	496013	True	NA	NA	False	AATAAA	-17	NA	499220	539529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_499490_500395_500602_505717_505928_507404_507594_508828_508971_515972_516186_521055_521250_521659_521942_523458_523914_527038_527231_530435_530746_533817_533982_539152
transcript_151844.known	chr4	+	3909	13	FSM	ENSG00000174227.16	ENST00000453061.7	3909	13	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_8	30.2474746420626	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTTTTACATTTTTACA	496002	True	NA	12	True	AATAAA	-20	NA	499209	540200	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_499490_500395_500602_505717_505928_507404_507594_508828_508971_515972_516186_521055_521274_521659_521942_523458_523914_527038_527231_530435_530746_533817_533982_539152
transcript_151851.known	chr4	+	3019	13	FSM	ENSG00000174227.16	ENST00000504346.5	3019	13	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	38.6266855079922	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTTTGTATCATATTTTC	496029	True	NA	NA	False	AATAAA	-16	NA	499236	539528	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_499299_500395_500602_505717_505928_507404_507594_508828_508971_515972_516186_521055_521274_521659_521942_523458_523914_527038_527231_530435_530746_533817_533982_539152
transcript_15188.nic	chr1	+	2520	14	NIC	ENSG00000125459.17	novel	2422	14	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_4	66.1518783249362	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTGATTTGCAAAATCTT	NA	False	NA	13	True	NA	NA	NA	155610167	155614935	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_155610333_155610424_155610561_155611038_155611109_155611215_155611356_155611548_155611604_155611688_155611828_155611982_155612101_155612181_155612317_155612417_155612571_155612843_155612976_155613048_155613234_155613461_155613567_155613656_155613767_155614058
transcript_151881.nic	chr4	+	2642	8	ISM	ENSG00000174227.16	ENST00000453061.7	3909	13	0	17357	0	0	5prime_fragment	FALSE	canonical	3	84	junction_7	15.2100933190928	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTACTTTTGACTGCTTT	496002	True	NA	12	True	AATAAA	-21	NA	499209	522843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_499490_500395_500602_505717_505928_507404_507594_508828_508971_515972_516186_521055_521274_521659
transcript_151898.known	chr4	+	3280	22	FSM	ENSG00000133256.13	ENST00000255622.10	3280	22	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	20.3239077071757	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCCATTATCTGTGGTA	625503	True	NA	10	True	AATAAA	-16	NA	625583	670782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_626095_634676_634830_635879_635970_653851_653993_654079_654155_654823_654889_655939_656007_656244_656293_656873_657024_657350_657495_658951_659018_660466_660614_662133_662242_662508_662619_663099_663188_663769_663871_664113_664222_664880_664945_665254_665330_666530_666615_667855_668007_670048
transcript_151902.nic	chr4	+	1195	7	ISM	ENSG00000133256.13	ENST00000429163.6	2120	20	10519	-353	-24	-196	3prime_fragment	FALSE	canonical	0	0	junction_5	20.317616876877	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTCATCCATTTTTGGAT	662970	True	NA	19	True	AATAAA	-13	NA	663698	670586	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_663871_664113_664222_664880_664945_665254_665330_666530_666615_667855_668007_670045
transcript_151903.nic	chr4	+	1391	7	ISM	ENSG00000133256.13	ENST00000429163.6	2120	20	10519	-549	-24	0	3prime_fragment	FALSE	canonical	0	0	junction_5	20.317616876877	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCCATTATCTGTGGTA	662970	True	NA	10	True	AATAAA	-16	NA	663698	670782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_663871_664113_664222_664880_664945_665254_665330_666530_666615_667855_668007_670045
transcript_151905.known	chr4	+	580	6	FSM	ENSG00000133256.13	ENST00000471824.6	580	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	22.1630322835121	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGGAAGCCCAAGAAAATG	663041	True	NA	NA	False	NA	NA	NA	663769	670193	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_663871_664113_664222_664880_664945_665254_665330_666530_666615_670045
transcript_151907.nic	chr4	+	1634	6	NIC	ENSG00000133256.13	novel	3294	22	NA	NA	-24	0	intron_retention	FALSE	canonical	0	0	junction_4	22.2494943762774	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCCATTATCTGTGGTA	662970	True	NA	10	True	AATAAA	-16	NA	663698	670782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_664222_664880_664945_665254_665330_666530_666615_667855_668007_670045
transcript_151913.nnic	chr4	-	2074	2	Genic_Genomic	ENSG00000272927.1	novel	737	1	NA	NA	-2274	-340	multi-exon	FALSE	canonical	2	2	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGCCTGCTGCACCTGT	-663815	True	NA	NA	False	AGTAAA	-15	NA	664219	661548	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Genic_Genomic_chr4_-_662605_663201
transcript_151930.known	chr4	+	2956	8	FSM	ENSG00000215375.6	ENST00000506838.5	2956	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	15.4536832674483	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGCCTGCGAGTCTGCC	673278	True	NA	22	True	AATAAA	-14	NA	673579	682027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_675855_676072_676210_678665_678766_678957_679034_679913_680019_680508_680588_681091_681141_681892
transcript_151932.known	chr4	+	584	7	FSM	ENSG00000215375.6	ENST00000505477.5	584	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	14.7845640224301	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGACCCTGCCTGCGAGT	673925	False	NA	17	True	AATAAA	-9	NA	673940	682022	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_673978_678657_678766_678957_679034_679913_680019_680508_680588_681091_681141_681892
transcript_151933.known	chr4	-	303	4	FSM	ENSG00000169020.10	ENST00000304312.5	303	4	0	0	0	0	multi-exon	FALSE	canonical	3	12319	junction_3	1462.88330209746	1195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGCTCCTCATTTGCTG	-636081	True	NA	-29	True	AATAAA	-21	NA	674276	672435	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_672520_673302_673402_673911_673967_674211
transcript_151935.known	chr4	-	496	3	FSM	ENSG00000169020.10	ENST00000506525.5	496	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	7778	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCGGCTCCTCATTTGC	-673809	False	97	-31	True	AATAAA	-19	NA	673821	672437	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_672520_673302_673402_673506
transcript_151936.known	chr4	-	300	3	FSM	ENSG00000169020.10	ENST00000505852.1	300	3	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	7727.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCGGCTCCTCATTTGC	-636135	True	NA	-31	True	AATAAA	-19	NA	674330	672437	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_672520_673302_673402_674211
transcript_151942.nic	chr4	+	3111	12	NIC	ENSG00000185619.18	novel	3609	13	NA	NA	-4	166	intron_retention	FALSE	canonical	3	28	junction_3	35.9349734110043	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAATATCATTGTAATAAT	703383	True	NA	9	True	AATAAA	-24	NA	705827	768030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_705971_730629_730669_730969_731111_732399_732499_733671_733790_734930_735028_737465_737522_743473_743585_744599_744689_761278_761417_764983_765065_766031
transcript_151950.known	chr4	+	2621	11	FSM	ENSG00000185619.18	ENST00000430644.5	2621	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	46.1133386342824	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCAAAAGAGGTTTCCAT	703387	True	NA	14	True	TATAAA	-17	NA	705831	766599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_705971_730629_730669_730969_731111_733671_733790_733883_735028_737465_737522_743473_743585_744599_744689_761278_761417_764983_765065_766034
transcript_151952.known	chr4	+	1652	11	FSM	ENSG00000185619.18	ENST00000470161.6	1652	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	39.3339547973503	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTTTCCATTAACATTAT	703339	True	NA	23	True	TATAAA	-26	NA	705783	766608	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_705971_730629_730669_730951_731111_733671_733790_734930_735028_737465_737522_743473_743585_744599_744689_761278_761417_764983_765065_766031
transcript_151959.nic	chr4	+	2808	10	NIC	ENSG00000185619.18	novel	3609	13	NA	NA	3	0	intron_retention	TRUE	canonical	3	106	junction_5	14.7204401437148	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTTTCCATTAACATTAT	NA	False	NA	23	True	TATAAA	-26	NA	705750	766608	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_705971_730629_730669_730969_731111_733671_735028_737465_737522_743473_743585_744599_744689_761278_761417_764983_765065_766031
transcript_151968.known	chr4	+	1175	4	FSM	ENSG00000185619.18	ENST00000400151.6	1175	4	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_3	7.93025150224688	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGACTTTAACGTTAATC	703339	True	NA	9	True	AATAAA	-22	NA	705783	734479	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_705971_730629_730669_730969_731111_733671
transcript_151969.known	chr4	-	534	2	FSM	ENSG00000249592.7	ENST00000507446.1	534	2	0	0	0	0	multi-exon	FALSE	canonical	2	33	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAAAAACGCCCTTCCAG	-780700	True	NA	NA	False	NA	NA	NA	781830	767140	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_767616_781771
transcript_151971.known	chr4	+	1899	1	FSM	ENSG00000185619.18	ENST00000620529.1	1899	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGAAAGTGTTTCTGGCT	768167	False	NA	10	True	AATAAA	-17	NA	768188	770087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_768200_770100
transcript_151972.known	chr4	-	618	2	FSM	ENSG00000249592.7	ENST00000503185.5	618	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAATGGGCGAGGCTGGAA	-780719	True	NA	NA	False	AAAACA	-41	NA	781849	780148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_780689_781771
transcript_151973.known	chr4	-	2112	4	FSM	ENSG00000168993.15	ENST00000304062.11	2112	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	1.24721912892465	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGTGTGGCCATTCCTTC	-825935	True	NA	-4	True	AATAAA	-15	NA	826129	784956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_786699_792432_792609_824491_824602_826045
transcript_151981.nnic	chr4	-	4684	29	NNC	ENSG00000178950.18	novel	4461	28	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_12	70.8204109861338	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGTGTCTCCAGTGTG	-932388	False	NA	-4	True	ATTAAA	-14	NA	932411	849277	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_849775_849891_850069_850935_851085_851749_851975_859605_859723_865121_865245_866363_866535_866955_867433_868538_868686_870710_870905_876529_876610_877089_877208_877349_877479_877614_877810_881906_882041_882696_882820_883314_883464_884036_884087_888846_888971_890531_890623_893376_893490_893873_894010_896459_896550_898032_898159_904636_904780_911672_911788_912734_912795_913606_913669_932042
transcript_151987.nic	chr4	-	4522	28	NIC	ENSG00000178950.18	novel	4461	28	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_7	52.2616872155624	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGTGTCTCCAGTGTG	-932388	False	NA	-4	True	ATTAAA	-14	NA	932411	849277	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_849775_849891_850069_850935_851085_851749_851975_859605_859723_865121_865245_866363_866502_866955_867433_868538_868686_870710_870905_876529_876610_877089_877208_877614_877810_881906_882041_882696_882820_883314_883464_884036_884087_888846_888971_890531_890623_893376_893490_893873_894010_896459_896550_898032_898159_904636_904780_911672_911788_912734_912795_913606_913669_932042
transcript_151992.known	chr4	-	4461	28	FSM	ENSG00000178950.18	ENST00000314167.9	4461	28	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_21	37.634295423774	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTGTCTCCAGTGTGG	-926830	True	NA	-3	True	ATTAAA	-15	NA	932316	849276	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_849775_849891_850069_850935_851085_851749_851975_859605_859723_865121_865245_866363_866535_866955_867433_868538_868686_870710_870905_876529_876610_877089_877208_877614_877810_881906_882041_882696_882820_883314_883464_884036_884087_888846_888971_890531_890623_893376_893490_893873_894010_896459_896550_898032_898159_904636_904780_911672_911788_912734_912795_913606_913669_932042
transcript_1520.known	chr1	-	907	5	FSM	ENSG00000157911.11	ENST00000510434.1	907	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	102.428938781967	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGAGTGCATCACCGCGT	-2410250	True	NA	NA	False	NA	NA	NA	2412535	2406517	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_2406620_2406719_2406896_2408455_2408859_2410370_2410452_2412390
transcript_152004.nnic	chr4	-	4297	27	NIC	ENSG00000178950.18	novel	4461	28	NA	NA	-38	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_3	70.5167737819548	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGTGTCTCCAGTGTG	-932388	False	NA	-4	True	ATTAAA	-14	NA	932411	849277	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_849775_849891_850069_850935_851085_859605_859723_865121_865245_866363_866502_866955_867433_868538_868686_870710_870905_876529_876610_877089_877208_877614_877810_881906_882041_882696_882820_883314_883464_884036_884087_888846_888971_890531_890623_893376_893490_893873_894010_896459_896550_898032_898159_904636_904780_911672_911788_912734_912795_913606_913669_932042
transcript_152005.nnic	chr4	-	4244	27	NIC	ENSG00000178950.18	novel	4461	28	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_3	61.1486330627577	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGTGTCTCCAGTGTG	-926839	True	NA	-4	True	ATTAAA	-14	NA	932325	849277	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_849775_849891_850069_850935_851085_859605_859723_865121_865245_866363_866535_866955_867433_868538_868686_870710_870905_876529_876610_877089_877208_877614_877810_881906_882041_882696_882820_883314_883464_884036_884087_888846_888971_890531_890623_893376_893490_893873_894010_896459_896550_898032_898159_904636_904780_911672_911788_912734_912795_913606_913669_932042
transcript_152018.known	chr4	-	4280	25	FSM	ENSG00000178950.18	ENST00000511163.5	4280	25	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_24	59.1264534705068	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGTGTCTCCAGTGTG	-926887	True	NA	-4	True	ATTAAA	-14	NA	932373	849277	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_849775_849891_850069_850935_851085_851749_851975_859605_859723_865121_865245_866363_866535_866955_867433_868538_868686_870710_870905_876529_876610_877089_877208_877614_877810_881906_882041_882696_882820_883314_883464_884036_884087_888846_888971_890531_890623_893376_893490_893873_894010_896459_896550_898032_898159_904636_904780_932042
transcript_152039.known	chr4	+	1787	11	FSM	ENSG00000127419.17	ENST00000264771.9	1787	11	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_3	10.6564534438058	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTCTCCACTTTTTGCGG	931481	True	NA	22	True	NA	NA	NA	932459	958656	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_932541_947708_947893_948115_948155_950420_950519_951206_951259_951681_951718_952366_952451_953189_953355_955404_955484_955754_955891_957823
transcript_152041.known	chr4	+	2236	11	FSM	ENSG00000127419.17	ENST00000438836.6	2236	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	13.5723984615837	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTCTCCACTTTTTGCGG	931493	True	NA	22	True	NA	NA	NA	932471	958656	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_932541_947708_947893_948115_948616_950420_950519_951206_951259_951681_951718_952366_952451_953189_953355_955404_955484_955754_955891_957823
transcript_152049.known	chr4	+	1514	9	FSM	ENSG00000127419.17	ENST00000515740.5	1514	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	17.2843860174436	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGGCAGGCCGCAGTGGT	931486	True	NA	-59	True	NA	NA	NA	932464	958575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_932541_950420_950519_951206_951259_951645_951718_952366_952451_953189_953355_955404_955484_955754_955891_957823
transcript_152050.known	chr4	+	1399	9	FSM	ENSG00000127419.17	ENST00000508204.5	1399	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	13.2470515587432	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCCCAGCCGTCCTCACC	931499	True	NA	NA	False	NA	NA	NA	932477	958509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_932541_950420_950519_951206_951259_951681_951718_952366_952451_953189_953355_955404_955484_955754_955891_957823
transcript_152053.known	chr4	+	2174	14	FSM	ENSG00000127415.13	ENST00000514224.2	2174	14	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	9.45747254726381	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCGGGTTGAGGCTCTGT	986727	True	NA	7	True	TTTAAA	-19	NA	987043	1004564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_987243_987808_987950_1000611_1000698_1000881_1000990_1001467_1001564_1001678_1001882_1001981_1002162_1002268_1002486_1002731_1002945_1003035_1003158_1003344_1003471_1003548_1003626_1004011_1004113_1004259
transcript_152059.known	chr4	+	1663	7	FSM	ENSG00000127418.15	ENST00000504138.5	1663	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	31.0572947237127	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGCACCGTATCTGCAGTG	1012129	True	NA	NA	False	NA	NA	NA	1012145	1025347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_1012278_1012469_1012565_1022202_1022476_1023640_1023722_1023816_1024102_1024310_1024665_1024904
transcript_152060.known	chr4	-	2335	10	FSM	ENSG00000178222.13	ENST00000382968.9	2335	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	2.16595429884644	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCCATTTTGTGGCTTG	-1113445	True	NA	NA	False	GATAAA	-20	NA	1113562	1071477	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_1073141_1073598_1073663_1079642_1079689_1081418_1081468_1081566_1081620_1085895_1085955_1090781_1090839_1096764_1096840_1108342_1108405_1113355
transcript_152064.known	chr4	-	1579	6	FSM	ENSG00000159674.12	ENST00000290902.10	1579	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	3.26190128606002	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCCTGGCTGTCCCCACA	-1172300	False	283	-4	True	AATAAA	-23	NA	1172583	1166931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_1167657_1170401_1170577_1170998_1171191_1171262_1171487_1171851_1172075_1172543
transcript_152074.nnic	chr4	-	2316	10	NNC	ENSG00000159692.16	novel	2488	10	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	2	41	junction_9	368.463811312473	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGTGCCCAGCATCTAT	-1248676	False	4372	-18	True	AATAAA	-15	NA	1248728	1211447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_1212424_1212912_1213031_1213477_1213606_1214342_1214474_1215990_1216206_1225359_1225567_1228198_1228344_1238182_1238338_1241324_1241498_1248660
transcript_152075.nnic	chr4	-	5281	10	NNC	ENSG00000159692.16	novel	2488	10	NA	NA	-2738	0	at_least_one_novel_splicesite	FALSE	canonical	3	115	junction_9	345.746142511711	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGTGCCCAGCATCTAT	-1244609	False	NA	-18	True	AATAAA	-15	NA	1244661	1211447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_1212424_1212912_1213031_1213477_1213606_1214342_1214474_1215990_1216206_1225359_1225567_1228198_1228344_1238182_1238338_1241324_1241520_1241650
transcript_152078.nic	chr4	-	2362	10	NIC	ENSG00000159692.16	novel	2488	10	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	143	junction_9	337.169408275044	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGTGCCCAGCATCTAT	-1248700	False	NA	-18	True	AATAAA	-15	NA	1248752	1211447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_1212424_1212912_1213031_1213477_1213606_1214342_1214474_1215990_1216206_1225359_1225567_1228198_1228344_1238182_1238338_1241324_1241520_1248660
transcript_152079.known	chr4	-	2488	10	FSM	ENSG00000159692.16	ENST00000382952.8	2488	10	0	0	0	0	multi-exon	FALSE	canonical	3	724	junction_9	164.598576415547	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTGCCCAGCATCTATTCT	-1244758	True	NA	-15	True	AATAAA	-18	NA	1249130	1211444	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_1212424_1212912_1213031_1213477_1213606_1214342_1214474_1215990_1216206_1225359_1225567_1228198_1228344_1238182_1238338_1241324_1241520_1248915
transcript_152080.nic	chr4	-	2471	10	NIC	ENSG00000159692.16	novel	2488	10	NA	NA	82	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_9	380.154939173198	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGTGCCCAGCATCTAT	NA	False	NA	-18	True	AATAAA	-15	NA	1249849	1211447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_1212424_1212912_1213031_1213477_1213606_1214342_1214474_1215990_1216206_1225359_1225567_1228198_1228344_1238182_1238338_1241324_1241520_1249648
transcript_152083.nnic	chr4	-	2150	9	NIC	ENSG00000159692.16	novel	2297	9	NA	NA	5	0	combination_of_known_splicesites	TRUE	canonical	3	10	junction_8	400.926719457559	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGTGCCCAGCATCTAT	-1248683	False	4372	-18	True	AATAAA	-15	NA	1248735	1211447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_1212424_1212912_1213031_1213477_1213606_1214342_1214474_1215990_1216206_1225359_1225567_1228198_1228344_1238182_1238338_1248660
transcript_152084.known	chr4	-	2297	9	FSM	ENSG00000159692.16	ENST00000290921.10	2297	9	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_8	361.133783209215	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGTGCCCAGCATCTAT	-1244765	True	NA	-18	True	AATAAA	-15	NA	1249137	1211447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_1212424_1212912_1213031_1213477_1213606_1214342_1214474_1215990_1216206_1225359_1225567_1228198_1228344_1238182_1238338_1248915
transcript_152092.known	chr4	+	2757	3	FSM	ENSG00000196810.5	ENST00000578730.1	2757	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATCTGTCTCAGACACT	1249395	True	NA	NA	False	CATAAA	-14	NA	1249450	1288291	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_1251823_1287604_1287724_1288025
transcript_152095.known	chr4	+	739	2	FSM	ENSG00000196810.5	ENST00000507044.1	739	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGCCCTGCAGAGATCTA	1248857	True	NA	NA	False	NA	NA	NA	1249299	1250446	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_1249703_1250110
transcript_152098.known	chr4	+	533	2	FSM	ENSG00000196810.5	ENST00000514984.1	533	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCTCCAACTGGGGTCC	1250059	False	NA	NA	False	NA	NA	NA	1250109	1251187	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_1250351_1250895
transcript_152105.known	chr4	+	2182	9	FSM	ENSG00000090316.16	ENST00000303400.9	2182	9	0	0	0	0	multi-exon	FALSE	canonical	3	678	junction_6	40.051334247438	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCGTGTGAGCCGAGGCT	1281835	True	NA	37	True	AATAAA	-45	NA	1289890	1340137	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_1289983_1311978_1312162_1315396_1315601_1322380_1322504_1327626_1327704_1332756_1332866_1336860_1336995_1338421_1338618_1339073
transcript_152110.known	chr4	+	1607	9	FSM	ENSG00000090316.16	ENST00000510794.5	1607	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	237.436175634632	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATTTGATGCTTCTGAA	NA	False	NA	NA	False	AAAACA	-30	NA	1309442	1339384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_1309713_1311978_1312162_1315396_1315601_1322380_1322504_1327626_1327704_1332756_1332866_1336860_1336995_1338421_1338618_1339073
transcript_152114.known	chr4	+	2058	8	FSM	ENSG00000090316.16	ENST00000264750.10	2058	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	249.422762164391	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCGTGTGAGCCGAGGC	1281835	True	NA	36	True	AATAAA	-44	NA	1289890	1340136	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_1289983_1311978_1312162_1315396_1315601_1327626_1327704_1332756_1332866_1336860_1336995_1338421_1338618_1339073
transcript_152117.known	chr4	+	1001	7	FSM	ENSG00000090316.16	ENST00000509531.5	1001	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	268.913658179639	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGCGCACGCCTCGGGG	1281858	True	NA	NA	False	NA	NA	NA	1289913	1339179	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_1289983_1311978_1312162_1315396_1315601_1332756_1332866_1336860_1336995_1338421_1338618_1339073
transcript_152123.known	chr4	+	3869	15	FSM	ENSG00000163945.19	ENST00000679192.1	3869	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	15.3085610302316	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAAGGCTGTTTTGACT	1346976	True	NA	NA	False	NA	NA	NA	1347058	1387868	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_1347230_1348089_1348190_1349523_1349855_1351714_1351836_1353029_1353414_1354734_1354848_1355116_1355246_1366319_1366432_1375363_1375509_1376033_1376169_1380046_1380231_1380879_1380989_1383765_1383941_1385867_1386399_1386739
transcript_152125.known	chr4	+	12504	14	FSM	ENSG00000163945.19	ENST00000511216.6	12504	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13.7026754179418	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGTTTGTGACCAAGT	1344466	True	NA	22	True	ATTAAA	-15	NA	1347265	1395989	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_1347610_1348089_1348190_1349523_1349855_1351714_1351836_1353029_1353414_1354734_1354848_1355116_1355246_1366319_1366432_1375363_1375509_1376033_1376169_1380046_1380231_1380879_1380989_1383765_1383941_1385867
transcript_152127.known	chr4	+	2597	14	FSM	ENSG00000163945.19	ENST00000507531.5	2597	14	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	10.7642845784198	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGTGCTTGTCGTGGTGT	1347681	False	NA	NA	False	NA	NA	NA	1347705	1386244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_1347888_1348089_1348190_1349523_1349855_1351714_1351836_1353029_1353414_1354734_1354848_1355116_1355246_1366319_1366432_1375363_1375509_1376033_1376169_1380046_1380231_1380879_1380989_1383765_1383941_1385867
transcript_152141.known	chr4	-	579	2	FSM	ENSG00000244459.3	ENST00000466692.2	853	2	274	0	211	0	multi-exon	FALSE	canonical	3	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGCTCTGGTGTGCAGT	-1580083	False	170	-7	True	NA	NA	NA	1580253	1574061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_1574545_1580157
transcript_152142.nic	chr4	-	2679	5	NIC	ENSG00000174137.14	novel	628	2	NA	NA	-22	1333	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	2.29128784747792	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGTTTTCCTAGAATAG	-1684162	True	NA	-4	True	AATAAA	-18	NA	1684335	1616581	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_1618112_1654977_1655724_1657407_1657469_1668666_1668906_1684232
transcript_152143.known	chr4	-	2802	5	FSM	ENSG00000174137.14	ENST00000308132.11	2848	5	52	-6	52	6	multi-exon	FALSE	canonical	3	8	junction_1	1.58113883008419	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTTTGAAATTTTCTT	-1684249	False	NA	NA	False	AATAAA	-44	NA	1684261	1639880	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_1641608_1654977_1655724_1657407_1657469_1668666_1668906_1684232
transcript_152145.known	chr4	-	1810	8	FSM	ENSG00000163950.13	ENST00000489418.6	1810	8	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_7	19.0712948095898	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTGCCTTTCTTGTG	-1703859	True	NA	2	True	NA	NA	NA	1712319	1692730	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_1693714_1694773_1694841_1696201_1696352_1699563_1699702_1700010_1700071_1703595_1703701_1711873_1711991_1712129
transcript_152147.known	chr4	-	987	7	FSM	ENSG00000163950.13	ENST00000488267.5	987	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	150.984546670622	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAACATTAATTTTATGT	-1703857	True	NA	NA	False	NA	NA	NA	1712317	1693446	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_1693714_1694773_1694841_1696201_1696352_1699563_1699702_1700010_1700071_1711873_1711991_1712129
transcript_152149.nic	chr4	-	1602	6	ISM	ENSG00000163950.13	ENST00000489418.6	1810	8	-450	3079	-425	485	5prime_fragment	FALSE	canonical	3	398	junction_5	21.35790251874	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAAGGCTTTCTTTCTCTGT	-1712755	False	NA	NA	False	AATAAA	-18	NA	1712769	1695809	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_1696352_1699563_1699702_1700010_1700071_1703595_1703701_1711873_1711991_1712129
transcript_152150.nic	chr4	-	411	3	ISM	ENSG00000163950.13	ENST00000318386.8	1635	8	-69	10739	0	-7302	5prime_fragment	FALSE	canonical	3	398	junction_2	25.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACACATTTTGGACCACC	-1703859	True	NA	NA	False	AAGAAA	-7	NA	1712319	1703596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_1703701_1711873_1711991_1712129
transcript_152151.known	chr4	-	1635	8	FSM	ENSG00000163950.13	ENST00000318386.8	1635	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	152.982725448706	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACGTTTCTATTGCTTTT	-1703790	True	NA	-90	True	NA	NA	NA	1712250	1692857	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_1693714_1694773_1694841_1696201_1696352_1699563_1699702_1700010_1700092_1703595_1703701_1711873_1711991_1712129
transcript_152160.known	chr4	+	2799	16	FSM	ENSG00000013810.21	ENST00000313288.9	2799	16	0	0	0	0	multi-exon	FALSE	canonical	3	712	junction_3	106.258092502276	1258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAAGCCGCTCTGGTCT	1707792	True	NA	39	True	AATAAA	-20	NA	1721520	1745171	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_1721644_1723420_1723584_1723727_1723871_1727707_1728788_1730886_1730963_1731171_1731302_1735272_1735326_1735730_1735835_1737240_1737329_1737597_1737703_1739701_1739779_1739958_1740003_1740825_1740987_1744517_1744625_1744711_1744833_1744947
transcript_152172.known	chr4	+	1732	15	FSM	ENSG00000013810.21	ENST00000612220.5	1732	15	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	249.128245393936	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTAAACACTGAAGCCGC	1707771	True	NA	31	True	AATAAA	-12	NA	1721499	1745163	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_1721644_1723420_1723584_1723727_1723871_1730886_1730963_1731171_1731302_1735272_1735326_1735730_1735835_1737240_1737329_1737597_1737703_1739701_1739779_1739958_1740003_1740825_1740987_1744517_1744625_1744711_1744833_1744947
transcript_152196.nnic	chr4	-	3025	4	NNC	ENSG00000168936.11	novel	2803	4	NA	NA	7	0	intron_retention	TRUE	canonical	3	14	junction_3	136.768254926191	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACTGTGTTTTGTGTTGC	-1721337	False	NA	-5	True	AATAAA	-17	NA	1721351	1715951	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_1717429_1717515_1717676_1718151_1718627_1720438
transcript_152197.known	chr4	-	2803	4	FSM	ENSG00000168936.11	ENST00000382936.8	2803	4	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_3	45.9081208018315	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACTGTGTTTTGTGTTGC	-1721309	False	NA	-5	True	AATAAA	-17	NA	1721323	1715951	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_1717429_1717515_1717676_1718151_1718627_1720632
transcript_152199.nnic	chr4	-	2464	4	NNC	ENSG00000168936.11	novel	2803	4	NA	NA	57	0	intron_retention	FALSE	canonical	3	18	junction_3	134.883488817407	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACTGTGTTTTGTGTTGC	-1721252	False	NA	-5	True	AATAAA	-17	NA	1721266	1715951	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_1717429_1717515_1717676_1718151_1718627_1720914
transcript_15220.known	chr1	+	2056	13	FSM	ENSG00000132676.16	ENST00000368336.10	2056	13	0	0	0	0	multi-exon	FALSE	canonical	3	451	junction_3	41.1082581592664	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATACTGTACTGTTTTAC	155678082	True	NA	NA	False	AATAAA	-32	NA	155689090	155739010	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155689175_155709772_155709825_155717005_155717129_155721516_155721619_155725381_155725491_155725926_155726020_155727607_155727739_155729041_155729123_155729207_155729367_155731355_155731416_155731943_155732034_155736945_155737064_155738156
transcript_152207.nic	chr4	-	3323	3	NIC	ENSG00000168936.11	novel	2803	4	NA	NA	-9	0	intron_retention	FALSE	canonical	3	207	junction_2	46	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACTGTGTTTTGTGTTGC	-1721353	False	NA	-5	True	AATAAA	-17	NA	1721367	1715951	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_1717429_1717515_1718627_1720632
transcript_152212.known	chr4	-	2678	3	FSM	ENSG00000168936.11	ENST00000303277.6	2678	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	99.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACTGTGTTTTGTGTTGC	-1721344	False	NA	-5	True	AATAAA	-17	NA	1721358	1715951	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_1717429_1718151_1718627_1720632
transcript_152217.nnic	chr4	-	2645	3	NNC	ENSG00000168936.11	novel	2678	3	NA	NA	-9	-3	intron_retention	FALSE	canonical	0	0	junction_1	103.5	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTACTGTGTTTTGTGT	-1721353	False	NA	-8	True	AATAAA	-14	NA	1721367	1715954	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_1717410_1718171_1718627_1720632
transcript_152226.known	chr4	-	5371	14	FSM	ENSG00000168924.15	ENST00000302787.3	5371	14	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_9	29.7020709337157	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTGCAGAGTAATAATATT	-1852013	True	NA	-3	True	ATTAAA	-24	NA	1856156	1811478	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_1814574_1815663_1815803_1816726_1816915_1819337_1819473_1822180_1822313_1822987_1823132_1823643_1823776_1825563_1825684_1832743_1832948_1834844_1834983_1836428_1836573_1841346_1841798_1849148_1849210_1855868
transcript_15224.known	chr1	+	1649	13	FSM	ENSG00000132676.16	ENST00000343043.7	1649	13	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	125.78958952685	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTTGTGTTAGATTAA	155678074	True	NA	-12	True	AATAAA	-11	NA	155689082	155738526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155689244_155709772_155709825_155717005_155717129_155721516_155721619_155725381_155725491_155725926_155726020_155727607_155727739_155729041_155729123_155729207_155729367_155731355_155731416_155731943_155732034_155736945_155737064_155738156
transcript_152246.known	chr4	-	1626	5	FSM	ENSG00000168924.15	ENST00000466175.5	1626	5	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_2	34.1201919689793	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACTGCCAGGCTGAGGC	-1855943	False	NA	NA	False	NA	NA	NA	1855955	1834099	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_1834983_1836428_1836573_1841346_1841798_1849148_1849210_1855868
transcript_152248.known	chr4	+	7560	22	FSM	ENSG00000109685.19	ENST00000508803.6	7560	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	62.8947218115005	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTCTTAACTTATTTTA	1869577	True	NA	13	True	ATTAAA	-15	NA	1871392	1982192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_1871543_1900625_1901252_1904215_1904379_1916870_1917038_1918140_1918624_1930625_1930771_1935143_1935263_1938450_1938533_1939653_1939779_1951071_1951204_1952107_1952232_1953323_1953525_1955160_1955341_1955692_1955850_1955982_1956189_1957932_1958037_1959470_1959741_1961034_1961152_1974862_1975005_1975293_1975401_1976474_1976680_1978637
transcript_152254.nic	chr4	+	4982	20	NIC	ENSG00000109685.19	novel	7560	22	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	79.1315045595016	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCGACTGAAGTGTGTGT	1871341	False	NA	23	True	AATATA	-28	NA	1871367	1979796	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_1871543_1900625_1901252_1904215_1904379_1916870_1917038_1918140_1918624_1930625_1930771_1935143_1935263_1951071_1951204_1952107_1952232_1953323_1953525_1955160_1955341_1955692_1955850_1955982_1956189_1957932_1958037_1959470_1959741_1961034_1961152_1974862_1975005_1975293_1975401_1976474_1976680_1978637
transcript_152262.nic	chr4	+	3233	10	NIC	ENSG00000109685.19	novel	7560	22	NA	NA	-25	-249	combination_of_known_junctions	FALSE	canonical	3	48	junction_9	63.0827401019124	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCCTCTTGACTGCATT	1871341	False	NA	-53	True	TATAAA	-20	NA	1871367	1943486	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_1871543_1900625_1901252_1904215_1904379_1916870_1917038_1918140_1918624_1930625_1930771_1935143_1935263_1938450_1938533_1939653_1939779_1942338
transcript_152265.known	chr4	+	3964	9	FSM	ENSG00000109685.19	ENST00000514045.5	3964	9	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_7	18.9604852258585	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCATTAGTGTTCATTT	1869645	False	NA	NA	False	ATTAAA	-25	NA	1871460	1941750	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_1871543_1900625_1901252_1904215_1904379_1916870_1917038_1918140_1918624_1930625_1930771_1935143_1935263_1938450_1938533_1939653
transcript_152274.nic	chr4	+	1759	6	ISM	ENSG00000109685.19	ENST00000514045.5	3964	9	-93	10980	-25	-10980	5prime_fragment	FALSE	canonical	3	234	junction_2	8.61162005664439	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAACATAGCATTATGCTG	1871341	False	NA	NA	False	NA	NA	NA	1871367	1930770	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_1871543_1900625_1901252_1904215_1904379_1916870_1917038_1918140_1918624_1930625
transcript_152275.known	chr4	+	2092	5	FSM	ENSG00000109685.19	ENST00000508355.5	2092	5	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_2	8.27647267862342	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAGCACAGAGGGAAGTGG	1869638	True	NA	NA	False	NA	NA	NA	1871453	1919187	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_1871543_1900625_1901252_1904215_1904379_1916870_1917038_1918140
transcript_152278.known	chr4	+	4220	4	FSM	ENSG00000109685.19	ENST00000677895.1	4220	4	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_3	12.657891697365	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAACATTTTAAAGGCT	NA	False	NA	-6	True	TTTAAA	-44	NA	1974632	1982173	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_1975005_1975293_1975401_1976474_1976680_1978637
transcript_152284.known	chr4	-	2198	11	FSM	ENSG00000185049.16	ENST00000382882.9	2198	11	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_6	31.8785194135487	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCATAGCTGTGTTTGG	-2002897	True	NA	-15	True	ATTAAA	-21	NA	2008974	1982722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_1983504_1983595_1983696_1983847_1984114_1984807_1984920_1985775_1985865_1986113_1986184_1986271_1986403_1987917_1988008_1989707_1989870_1991543_1991716_2008749
transcript_152287.known	chr4	-	2228	10	FSM	ENSG00000185049.16	ENST00000333877.8	2228	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	140.995228007857	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAGCCACCATAGCTG	-2009059	True	NA	-22	True	ATTAAA	-14	NA	2009183	1982729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_1983504_1983595_1983696_1983847_1984114_1984807_1984920_1985775_1985865_1986113_1986184_1986271_1986403_1987917_1988008_1989707_1989870_2008749
transcript_152296.known	chr4	+	425	4	FSM	ENSG00000243449.8	ENST00000409248.10	425	4	0	0	0	0	multi-exon	TRUE	canonical	3	733	junction_1	137.526563090756	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGTGTCCTGTCTCTCT	2038114	True	NA	13	True	AATAAA	-13	NA	2041994	2043964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_2042069_2042326_2042485_2042735_2042825_2043860
transcript_152297.known	chr4	+	477	4	FSM	ENSG00000243449.8	ENST00000409860.1	477	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	453.903318144098	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGTGTCCTGTCTCTCT	2038169	True	NA	13	True	AATAAA	-13	NA	2042049	2043964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_2042176_2042326_2042485_2042735_2042825_2043860
transcript_152298.known	chr4	+	6056	3	FSM	ENSG00000185818.8	ENST00000423729.3	6056	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	4	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCTCCCGTGCTCTCTT	2058838	True	NA	24	True	AATAAA	-17	NA	2059326	2069089	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_2059888_2060997_2061163_2063759
transcript_152305.known	chr4	-	5879	6	FSM	ENSG00000214367.9	ENST00000443786.3	5879	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	53.1977443130815	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAAGCAGTGATATGCTC	-2240366	True	NA	NA	False	NA	NA	NA	2242121	2228348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_2232161_2236227_2236457_2238603_2239044_2240037_2241094_2241519_2241791_2242050
transcript_152307.nic	chr4	-	2477	6	NIC	ENSG00000214367.9	novel	5879	6	NA	NA	-31	-3492	combination_of_known_junctions	FALSE	canonical	3	11	junction_5	58.4445035910136	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAGGTCAATGGAACATT	-2240409	True	NA	-5	True	AATAAA	-20	NA	2242164	2231840	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_2232161_2236227_2236457_2238603_2239044_2240037_2241094_2241519_2241838_2242050
transcript_152310.nic	chr4	-	3343	5	ISM	ENSG00000214367.9	ENST00000443786.3	5879	6	-52	2848	-40	-2848	intron_retention	FALSE	canonical	3	122	junction_4	21.7873242964803	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATTCCTCCATAATTCC	-2240418	True	NA	-14	True	AATAAA	-16	NA	2242173	2231196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_2232161_2236227_2236457_2238603_2239044_2240037_2241094_2241519
transcript_152311.known	chr4	-	5620	5	FSM	ENSG00000214367.9	ENST00000243706.8	5620	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	64.9206246119059	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAAGCAGTGATATGCTC	-2240378	True	NA	NA	False	NA	NA	NA	2242133	2228348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_2232161_2236227_2236457_2238603_2239044_2240037_2241094_2242050
transcript_152313.known	chr4	-	5738	27	FSM	ENSG00000214367.9	ENST00000672739.1	5738	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	52.5012397712168	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCATACCACTGCACTCC	NA	False	NA	NA	False	NA	NA	NA	2242276	2078997	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_2079360_2080957_2081159_2081632_2081744_2085612_2085745_2095850_2095934_2123501_2123618_2128112_2128228_2129178_2129257_2131232_2131291_2156787_2156854_2157857_2157912_2159154_2159212_2170678_2170775_2171097_2171182_2173954_2174020_2174690_2174752_2179307_2179466_2193203_2193317_2198523_2198718_2207986_2208488_2213046_2213127_2229098_2229244_2231834_2232161_2236227_2236457_2238603_2239044_2240037_2241094_2241519
transcript_152322.known	chr4	-	3871	6	FSM	ENSG00000123933.17	ENST00000337190.7	3871	6	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_3	12.8436754864019	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCTGGCTCCGGCTCTT	-2260067	True	NA	-3	True	TATAAA	-20	NA	2262109	2247431	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_2250702_2251083_2251247_2252407_2252523_2257981_2258012_2261724_2261825_2261916
transcript_152327.known	chr4	-	4114	13	FSM	ENSG00000159733.14	ENST00000290974.7	4114	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	3.41565025531987	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGCTCTCCTTTCTTCCAT	-2418131	True	NA	-18	True	CATAAA	-18	NA	2418645	2269596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_2270857_2271310_2271415_2271674_2271780_2273172_2273290_2274061_2274217_2304288_2305537_2320169_2320272_2335704_2335795_2337406_2337497_2339452_2339656_2341477_2341616_2353932_2354074_2418284
transcript_152336.known	chr4	+	2098	9	FSM	ENSG00000063978.16	ENST00000506706.5	2098	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	316.466205739254	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGATGTAGCACTATTAGT	2461960	False	NA	NA	False	AATAAA	-32	NA	2469452	2514474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_2470043_2470986_2471110_2490336_2490503_2497006_2497122_2500658_2500739_2511955_2511966_2512437_2512598_2513082_2513132_2513669
transcript_152337.known	chr4	+	2796	7	FSM	ENSG00000063978.16	ENST00000541204.5	2796	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	293.966787617619	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATCTTTTACACATTCA	NA	False	NA	16	True	AATAAA	-17	NA	2469067	2515854	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_2469259_2490336_2490503_2497006_2497122_2500658_2500739_2511955_2511966_2513082_2513132_2513669
transcript_152339.known	chr4	+	2921	8	FSM	ENSG00000063978.16	ENST00000314289.13	2921	8	0	0	0	0	multi-exon	FALSE	canonical	1	251	junction_4	200.045709062418	1074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTTTACACATTCATTT	2461613	True	NA	19	True	AATAAA	-20	NA	2469105	2515857	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_2469259_2490336_2490503_2497006_2497122_2500658_2500739_2511955_2511966_2512437_2512598_2513082_2513132_2513669
transcript_152343.known	chr4	+	855	8	FSM	ENSG00000063978.16	ENST00000502316.5	855	8	0	0	0	0	multi-exon	FALSE	canonical	1	23	junction_1	280.496207548301	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATGAAGTATTCAGAGC	2461604	True	NA	NA	False	AAAAAG	-29	NA	2469096	2513811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_2469230_2490336_2490503_2497006_2497122_2500658_2500739_2511955_2511966_2512437_2512598_2513082_2513132_2513669
transcript_152359.known	chr4	-	2006	6	FSM	ENSG00000168884.15	ENST00000510267.5	2006	6	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_5	125.164531717256	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGAAGCTGGGGTGCAG	-2750811	True	NA	6	True	AATAAA	-34	NA	2756331	2741647	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_2742521_2744386_2744507_2744696_2744946_2745445_2745536_2747654_2747946_2755948
transcript_152360.known	chr4	-	1946	6	FSM	ENSG00000168884.15	ENST00000315423.12	1946	6	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_2	31.7679083352996	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGAAGCTGGGGTGCAG	-2750816	True	NA	6	True	AATAAA	-34	NA	2756336	2741647	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_2742521_2744386_2744507_2744696_2744946_2745445_2745536_2747654_2747946_2756013
transcript_152363.nic	chr4	-	2542	5	NIC	ENSG00000168884.15	novel	1946	6	NA	NA	-90	0	intron_retention	FALSE	canonical	3	262	junction_2	35.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGAAGCTGGGGTGCAG	-2756385	False	NA	6	True	AATAAA	-34	NA	2756432	2741647	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_2742521_2744386_2744507_2744696_2745536_2747654_2747946_2756013
transcript_152364.known	chr4	-	1653	5	FSM	ENSG00000168884.15	ENST00000503235.1	1653	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	138.997077307402	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTATTTTTATAATAAACGT	-2750822	True	NA	-44	True	NA	NA	NA	2756342	2741697	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_2742521_2744386_2744507_2745445_2745536_2747654_2747946_2756013
transcript_152366.nic	chr4	-	2232	5	NIC	ENSG00000168884.15	novel	1946	6	NA	NA	-90	0	intron_retention	FALSE	canonical	3	319	junction_2	13.1790553530972	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGAAGCTGGGGTGCAG	-2756385	False	NA	6	True	AATAAA	-34	NA	2756432	2741647	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_2742521_2744386_2744946_2745445_2745536_2747654_2747946_2756013
transcript_15237.known	chr1	+	1470	12	FSM	ENSG00000132676.16	ENST00000421487.6	1470	12	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	137.296686650805	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTTGTGTTAGATTAA	155678082	True	NA	-12	True	AATAAA	-11	NA	155689090	155738526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155689175_155709772_155709825_155717005_155717129_155725381_155725491_155725926_155726020_155727607_155727739_155729041_155729123_155729207_155729367_155731355_155731416_155731943_155732034_155736945_155737064_155738156
transcript_152375.known	chr4	+	9006	13	FSM	ENSG00000087266.17	ENST00000503393.8	9006	13	0	0	0	0	multi-exon	TRUE	canonical	1	20	junction_1	28.3091808822195	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTGTCTCACTTGTGTT	2792332	True	NA	12	True	ATTAAA	-23	NA	2793084	2841096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_2793139_2820613_2820754_2822934_2823038_2824612_2824731_2825125_2825197_2827229_2827319_2827605_2827675_2829492_2830148_2831570_2831680_2831922_2831979_2832330_2832413_2832989_2833050_2833696
transcript_152377.known	chr4	+	2351	13	FSM	ENSG00000087266.17	ENST00000511747.6	2351	13	0	0	0	0	multi-exon	FALSE	canonical	1	29	junction_9	21.0652096015102	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGGCTGGGGCTTGAT	2817020	True	NA	24	True	AATAAA	-18	NA	2818184	2834289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_2818391_2820613_2820754_2822934_2823038_2824612_2824731_2825125_2825197_2827229_2827319_2827605_2827675_2829492_2830148_2831570_2831680_2831922_2831979_2832330_2832413_2832989_2833050_2833696
transcript_15238.known	chr1	+	1894	12	FSM	ENSG00000132676.16	ENST00000535183.5	1894	12	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	144.88239745017	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	155678082	True	NA	NA	False	NA	NA	NA	155689090	155738971	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155689175_155709772_155709825_155721516_155721619_155725381_155725491_155725926_155726020_155727607_155727739_155729041_155729123_155729207_155729367_155731355_155731416_155731943_155732034_155736945_155737064_155738156
transcript_152394.known	chr4	+	3107	16	FSM	ENSG00000087274.19	ENST00000513328.6	3107	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_14	265.654110953824	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTTGCTTTCTTCTTT	2835559	True	NA	NA	False	NA	NA	NA	2843972	2929307	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_2844025_2875895_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763_2905016_2907742_2907845_2908514_2908605_2914883_2915041_2926013_2926113_2926638_2926676_2928170
transcript_152397.known	chr4	+	4140	16	FSM	ENSG00000087274.19	ENST00000683351.1	4140	16	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_12	346.56898623827	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTTGTCTAAATCTGGG	2835430	True	NA	13	True	AATAAA	-14	NA	2843843	2930062	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_2844025_2875895_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763_2905109_2907742_2907845_2908514_2908605_2909338_2909432_2914883_2915041_2926013_2926113_2928170
transcript_152398.known	chr4	+	3206	16	FSM	ENSG00000087274.19	ENST00000503455.6	3206	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_14	319.818865401444	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGACCCCACAGTAGAGCA	2835573	True	NA	NA	False	NA	NA	NA	2843986	2929327	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_2844025_2875895_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763_2905109_2907742_2907845_2908514_2908605_2914883_2915041_2926013_2926113_2926638_2926676_2928170
transcript_152409.nic	chr4	+	2346	15	NIC	ENSG00000087274.19	novel	3107	16	NA	NA	-23	0	combination_of_known_junctions	TRUE	canonical	3	597	junction_14	104.515622306536	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTCTCCAGGCAAGTCC	NA	False	NA	NA	False	NA	NA	NA	2843820	2928431	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_2844025_2875895_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763_2905016_2907742_2907845_2908514_2908605_2914883_2915041_2926013_2926113_2928170
transcript_152410.nic	chr4	+	3977	15	NIC	ENSG00000087274.19	novel	4140	16	NA	NA	-23	0	intron_retention	FALSE	canonical	3	597	junction_14	104.515622306536	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTTGTCTAAATCTGGG	NA	False	NA	13	True	AATAAA	-14	NA	2843820	2930062	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_2844025_2875895_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763_2905016_2907742_2907845_2908514_2908605_2914883_2915041_2926013_2926113_2928170
transcript_152411.known	chr4	+	4045	15	FSM	ENSG00000087274.19	ENST00000264758.11	4045	15	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_10	226.659514943198	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTGGGAAGCAGTTTTA	2835443	True	NA	24	True	AATAAA	-25	NA	2843856	2930073	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_2844025_2875895_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763_2905109_2907742_2907845_2908514_2908605_2914883_2915041_2926013_2926113_2928170
transcript_152420.nic	chr4	+	4136	15	NIC	ENSG00000087274.19	novel	4743	18	NA	NA	-108	0	intron_retention	FALSE	canonical	2	54	junction_1	235.75334092034	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTTGTCTAAATCTGGG	NA	False	NA	13	True	AATAAA	-14	NA	2867766	2930062	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_2868130_2875895_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763_2905016_2907742_2907845_2908514_2908605_2914883_2915041_2926013_2926113_2928170
transcript_152445.nic	chr4	+	3027	10	ISM	ENSG00000087274.19	ENST00000513328.6	3107	16	-152	22902	-23	684	5prime_fragment	FALSE	canonical	3	853	junction_4	42.1610668218388	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAAAACACCTTTCTGCG	NA	False	NA	NA	False	TATAAA	-15	NA	2843820	2906405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_2844025_2875895_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763
transcript_152447.known	chr4	+	2394	10	FSM	ENSG00000087274.19	ENST00000503169.5	2394	10	0	0	0	0	multi-exon	FALSE	canonical	2	54	junction_1	271.106967181445	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGCGGCATGACCCAAG	2866454	True	NA	NA	False	NA	NA	NA	2867874	2905721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_2868130_2875895_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763
transcript_152451.known	chr4	+	3787	14	FSM	ENSG00000087274.19	ENST00000398129.5	3787	14	0	0	0	0	multi-exon	FALSE	canonical	3	597	junction_13	108.458865215283	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGGAAGCAGTTTTATAT	2875829	True	NA	27	True	AATAAA	-28	NA	2875895	2930076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763_2905016_2907742_2907845_2908514_2908605_2914883_2915041_2926013_2926113_2928170
transcript_152453.known	chr4	-	1589	13	FSM	ENSG00000109736.15	ENST00000503596.5	1589	13	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_8	234.762335494147	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTGTTTGTTTTATACC	-2927333	True	NA	21	True	AATAAA	-1	NA	2934816	2930582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_2930954_2931060_2931151_2931226_2931275_2931374_2931466_2931554_2931664_2931824_2931937_2932044_2932154_2932350_2932410_2932599_2932759_2933105_2933210_2933566_2933664_2933752_2933945_2934768
transcript_15246.known	chr1	-	2743	12	FSM	ENSG00000163374.20	ENST00000361831.9	2743	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_8	135.868555828087	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTGTGCAATTTGTTC	-155686397	True	NA	-3	True	AATAAA	-29	NA	155688705	155659445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155660914_155661306_155661424_155668626_155668778_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155679927_155680009_155680415_155680457_155688070_155688202_155688658
transcript_152461.known	chr4	-	1717	13	FSM	ENSG00000109736.15	ENST00000355443.9	1717	13	0	0	0	0	multi-exon	FALSE	canonical	3	495	junction_12	122.397122333638	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAAGTGCCTTTCGCCAT	-2927342	True	NA	-9	True	AATAAA	-17	NA	2934825	2930566	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_2930954_2931060_2931151_2931226_2931275_2931374_2931466_2931554_2931664_2931824_2931937_2932044_2932154_2932350_2932513_2932599_2932759_2933105_2933210_2933566_2933664_2933752_2933945_2934768
transcript_152470.nic	chr4	-	1886	12	NIC	ENSG00000109736.15	novel	1717	13	NA	NA	-47	0	intron_retention	FALSE	canonical	3	495	junction_11	126.257574848448	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCTTTCGCCATATATAG	NA	False	NA	-3	True	AATAAA	-23	NA	2934881	2930560	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_2931151_2931226_2931275_2931374_2931466_2931554_2931664_2931824_2931937_2932044_2932154_2932350_2932513_2932599_2932759_2933105_2933210_2933566_2933664_2933752_2933945_2934768
transcript_152475.nic	chr4	-	2120	12	NIC	ENSG00000109736.15	novel	1717	13	NA	NA	-47	0	intron_retention	FALSE	canonical	3	495	junction_11	123.628542533371	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAAGTGCCTTTCGCCAT	NA	False	NA	-9	True	AATAAA	-17	NA	2934881	2930566	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_2930954_2931060_2931151_2931226_2931275_2931374_2931466_2931554_2931664_2931824_2931937_2932044_2932154_2932350_2932513_2932599_2933210_2933566_2933664_2933752_2933945_2934768
transcript_152483.known	chr4	-	1573	12	FSM	ENSG00000109736.15	ENST00000507555.1	1573	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	254.784854954233	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACCAGGTTTCTGATGAT	-2927351	True	NA	-7	True	TTTAAA	-4	NA	2934834	2930610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_2930954_2931060_2931151_2931226_2931275_2931374_2931466_2931824_2931937_2932044_2932154_2932350_2932513_2932599_2932759_2933105_2933210_2933566_2933664_2933752_2933945_2934768
transcript_1525.nic	chr1	-	2634	19	NIC	ENSG00000157881.16	novel	2641	19	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_4	41.0626215540227	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGAGCCATCTGCGATGT	NA	False	NA	-5	True	AATAGA	-14	NA	2526623	2508536	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_2509061_2509861_2509931_2510056_2510158_2510677_2510749_2511337_2511388_2511627_2511684_2512887_2513040_2514001_2514090_2514353_2514467_2515561_2515718_2518163_2518265_2518515_2518598_2519142_2519325_2519800_2519955_2520321_2520415_2520722_2520907_2521100_2521316_2521717_2521801_2526463
transcript_152540.known	chr4	-	2173	12	FSM	ENSG00000109736.15	ENST00000329687.8	2173	12	0	0	0	0	multi-exon	FALSE	canonical	3	694	junction_9	85.3110012961327	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCAAGTGCCTTTCGCCA	-2926975	False	142	-10	True	AATAAA	-16	NA	2934458	2930567	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_2930954_2931060_2931151_2931226_2931275_2931374_2931466_2931554_2931664_2931824_2931937_2932044_2932154_2932350_2932513_2932599_2932759_2933105_2933210_2933566_2933664_2933752
transcript_152541.known	chr4	-	1776	11	FSM	ENSG00000109736.15	ENST00000514800.5	1776	11	0	0	0	0	multi-exon	FALSE	canonical	3	694	junction_8	88.6665664159834	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCTTTCGCCATATATAG	-2926464	False	NA	-3	True	AATAAA	-23	NA	2933947	2930560	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_2931151_2931226_2931275_2931374_2931466_2931554_2931664_2931824_2931937_2932044_2932154_2932350_2932513_2932599_2932759_2933105_2933210_2933566_2933664_2933752
transcript_152548.nnic	chr4	-	3211	19	NNC	ENSG00000087269.16	novel	3556	18	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	36.1003830218045	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTTTGCAGATATTTTAG	-2957012	True	NA	-20	True	TATAAA	-6	NA	2963419	2937935	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_2938354_2938711_2938931_2939187_2939344_2939526_2939646_2941581_2941730_2942191_2942352_2944072_2944227_2945127_2945230_2946411_2946548_2947525_2947612_2948277_2948409_2949933_2950214_2951113_2951246_2952274_2952398_2953510_2953646_2954423_2954564_2956669_2956812_2957605_2957741_2963124
transcript_152552.nnic	chr4	-	3428	19	NNC	ENSG00000087269.16	novel	3556	18	NA	NA	-100	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.1003830218045	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTTTGCAGATATTTTAG	-2963491	False	NA	-20	True	TATAAA	-6	NA	2963506	2937935	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_2938419_2938646_2938931_2939187_2939344_2939526_2939646_2941581_2941730_2942191_2942352_2944072_2944227_2945127_2945230_2946411_2946548_2947525_2947612_2948277_2948409_2949933_2950214_2951113_2951246_2952274_2952398_2953510_2953646_2954423_2954564_2956669_2956812_2957605_2957741_2963124
transcript_152554.known	chr4	-	2889	19	FSM	ENSG00000087269.16	ENST00000314262.10	2889	19	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	34.3515323934432	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAACAAGTTTGCAGATA	-2956961	True	NA	-26	True	NA	NA	NA	2963368	2937941	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_2938189_2938811_2938931_2939187_2939344_2939526_2939646_2941581_2941730_2942191_2942352_2944072_2944227_2945127_2945230_2946411_2946548_2947525_2947612_2948277_2948409_2949933_2950214_2951113_2951246_2952274_2952398_2953510_2953646_2954423_2954564_2956669_2956812_2957605_2957741_2963124
transcript_152557.nnic	chr4	-	3034	19	NNC	ENSG00000087269.16	novel	2889	19	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	36.1003830218045	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGGGATCGGGAATGGT	-2957012	True	NA	-14	True	AATAGA	-18	NA	2963419	2938112	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_2938354_2938711_2938931_2939187_2939344_2939526_2939646_2941581_2941730_2942191_2942352_2944072_2944227_2945127_2945230_2946411_2946548_2947525_2947612_2948277_2948409_2949933_2950214_2951113_2951246_2952274_2952398_2953510_2953646_2954423_2954564_2956669_2956812_2957605_2957741_2963124
transcript_152561.nnic	chr4	-	3248	19	NNC	ENSG00000087269.16	novel	2889	19	NA	NA	-100	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.1003830218045	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTCTGGGATCGGGAAT	-2963491	False	NA	-17	True	AATAGA	-15	NA	2963506	2938115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_2938419_2938646_2938931_2939187_2939344_2939526_2939646_2941581_2941730_2942191_2942352_2944072_2944227_2945127_2945230_2946411_2946548_2947525_2947612_2948277_2948409_2949933_2950214_2951113_2951246_2952274_2952398_2953510_2953646_2954423_2954564_2956669_2956812_2957605_2957741_2963124
transcript_152568.known	chr4	-	3556	18	FSM	ENSG00000087269.16	ENST00000416614.7	3556	18	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_11	10.8222505638354	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTTTGCAGATATTTTAG	-2956999	True	NA	-20	True	TATAAA	-6	NA	2963406	2937935	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_2938931_2939187_2939344_2939526_2939646_2941581_2941730_2942191_2942352_2944072_2944227_2945127_2945230_2946411_2946548_2947525_2947612_2948277_2948409_2949933_2950214_2951113_2951246_2952274_2952398_2953510_2953646_2954423_2954564_2956669_2956812_2957605_2957741_2963124
transcript_15258.known	chr1	-	2654	11	FSM	ENSG00000163374.20	ENST00000404643.5	2654	11	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_3	89.3955256151	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTGTGCAATTTGTTC	-155686449	True	NA	-3	True	AATAAA	-29	NA	155688757	155659445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155660914_155661306_155661424_155668626_155668718_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688070_155688202_155688658
transcript_152580.known	chr4	-	2535	17	FSM	ENSG00000087269.16	ENST00000398071.4	2535	17	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	35.7088924499206	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGGGATCGGGAATGGT	-2956926	True	NA	-14	True	AATAGA	-18	NA	2963333	2938112	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_2938328_2939538_2939646_2941581_2941730_2942191_2942352_2944072_2944227_2945127_2945230_2946411_2946548_2947525_2947612_2948277_2948409_2949933_2950214_2951113_2951246_2952274_2952398_2953510_2953646_2954423_2954564_2956669_2956812_2957605_2957741_2963124
transcript_152588.nic	chr4	-	2575	17	ISM	ENSG00000087269.16	ENST00000416614.7	3556	18	-13	1251	-13	-1074	5prime_fragment	FALSE	canonical	3	129	junction_10	11.1325465977017	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGGGACGTGTGTGTGC	-2957012	True	NA	NA	False	NA	NA	NA	2963419	2939186	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_2939344_2939526_2939646_2941581_2941730_2942191_2942352_2944072_2944227_2945127_2945230_2946411_2946548_2947525_2947612_2948277_2948409_2949933_2950214_2951113_2951246_2952274_2952398_2953510_2953646_2954423_2954564_2956669_2956812_2957605_2957741_2963124
transcript_15259.known	chr1	-	2626	11	FSM	ENSG00000163374.20	ENST00000295566.8	2626	11	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_10	125.033155602824	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTGTGCAATTTGTTC	-155688175	True	NA	-3	True	AATAAA	-29	NA	155689000	155659445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155660914_155661306_155661424_155668626_155668718_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688070_155688202_155688929
transcript_152594.nic	chr4	-	2345	14	ISM	ENSG00000087269.16	ENST00000398071.4	2535	17	-73	3872	0	-3872	5prime_fragment	FALSE	canonical	3	129	junction_7	11.0276682692046	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCATAATTTGGAACCAAAAA	-2956999	True	NA	-2	True	AATACA	-19	NA	2963406	2941984	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_2942352_2944072_2944227_2945127_2945230_2946411_2946548_2947525_2947612_2948277_2948409_2949933_2950214_2951113_2951246_2952274_2952398_2953510_2953646_2954423_2954564_2956669_2956812_2957605_2957741_2963124
transcript_152600.known	chr4	+	1360	5	FSM	ENSG00000249673.8	ENST00000507999.5	1360	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.59522876548166	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACACCAGCAGGAAGTGG	2933770	True	NA	2	True	AATAAA	-15	NA	2934939	2940504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_2935736_2937751_2937845_2937974_2938143_2938692_2938793_2940301
transcript_152602.known	chr4	+	2541	5	FSM	ENSG00000249673.8	ENST00000658490.1	2541	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	4.49305018890286	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCACAGCCACACCAGCAG	2933737	True	NA	-5	True	AATAAA	-8	NA	2934906	2940497	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_2936891_2937751_2937845_2937974_2938143_2938692_2938793_2940301
transcript_152605.nic	chr4	-	825	5	ISM	ENSG00000087269.16	ENST00000398071.4	2535	17	-70	15404	3	-15404	5prime_fragment	FALSE	canonical	3	132	junction_3	11.1214882097676	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGGTGGGAGCCAAGTA	-2956996	True	NA	NA	False	AAAAAG	-7	NA	2963403	2953516	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_2953646_2954423_2954564_2956669_2956812_2957605_2957741_2963124
transcript_152608.nic	chr4	+	1495	10	ISM	ENSG00000197386.14	ENST00000680291.1	7184	41	-30	78515	-30	-531	5prime_fragment	FALSE	canonical	2	23	junction_9	6.53952843091652	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGATTATTTCAGAAATCA	3069221	True	NA	NA	False	AAGAAA	-8	NA	3074650	3122935	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_3075089_3086938_3087023_3099273_3099395_3103823_3103884_3105356_3105437_3107284_3107424_3115303_3115446_3116084_3116264_3121227_3121433_3122888
transcript_152609.nic	chr4	+	1728	9	ISM	ENSG00000197386.14	ENST00000680291.1	7184	41	-30	79738	-30	0	5prime_fragment	FALSE	canonical	3	24	junction_2	5.80813007774447	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTAGCTGGGCATGGTG	3069221	True	NA	NA	False	NA	NA	NA	3074650	3121712	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_3075089_3086938_3087023_3099273_3099395_3103823_3103884_3105356_3105437_3107284_3107424_3115303_3115446_3116084_3116264_3121227
transcript_152615.nnic	chr4	+	3679	16	ISM	ENSG00000159788.20	ENST00000336727.8	4753	18	-43	11311	-43	4	5prime_fragment	FALSE	canonical	3	31	junction_15	10.3180532186175	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAGAAAATGGAAAAAATGC	NA	False	NA	NA	False	AATAAA	-2	NA	3292977	3428602	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_3293100_3316069_3318052_3342936_3343054_3386415_3386438_3414071_3414242_3414751_3414845_3415977_3416122_3416912_3417093_3417387_3417542_3420641_3420719_3422375_3422571_3422904_3422979_3423514_3423642_3425463_3425561_3428089_3428170_3428557
transcript_15262.known	chr1	-	2723	11	FSM	ENSG00000163374.20	ENST00000355499.9	2723	11	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_3	54.7632175826074	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTCATTGATTTGTGCA	-155686466	True	NA	-11	True	AATAAA	-21	NA	155688774	155659453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155660914_155661306_155661424_155668626_155668778_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688070_155688202_155688658
transcript_152620.nic	chr4	+	1681	15	NIC	ENSG00000159788.20	novel	4753	18	NA	NA	-27	4	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	13.5407548096968	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAGAAAATGGAAAAAATGC	NA	False	NA	NA	False	AATAAA	-2	NA	3292993	3428602	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_3293100_3342936_3343054_3386415_3386438_3414071_3414242_3414751_3414845_3415977_3416122_3416912_3417093_3417387_3417542_3420641_3420719_3422375_3422571_3422904_3422979_3423514_3423642_3425463_3425561_3428089_3428170_3428557
transcript_152622.nic	chr4	+	3399	15	NIC	ENSG00000159788.20	novel	4753	18	NA	NA	-27	-81	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	14.8468370850014	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGGACTGGCTTACAAC	NA	False	NA	19	True	AATAAA	-13	NA	3292993	3432169	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_3293100_3342936_3343054_3386415_3386438_3414071_3414242_3414751_3414845_3415977_3416122_3416912_3417093_3417387_3417542_3420641_3420719_3422375_3422571_3422904_3422979_3423514_3423642_3425463_3425561_3428089_3428170_3430406
transcript_152629.nnic	chr4	+	4486	9	ISM	ENSG00000159788.20	ENST00000336727.8	4753	18	-43	20870	-43	-467	5prime_fragment	FALSE	canonical	3	33	junction_7	12.2754836971909	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGGGCCAGGCACGGTGG	NA	False	NA	NA	False	ACTAAA	-29	NA	3292977	3419043	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_3293100_3316069_3318052_3342936_3343054_3386415_3386438_3414071_3414242_3414751_3414845_3415977_3416122_3416912_3417093_3417387
transcript_15263.nic	chr1	-	2696	11	NIC	ENSG00000163374.20	novel	2723	11	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_10	106.5393823898	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTCATTGATTTGTGCA	-155689005	False	NA	-11	True	AATAAA	-21	NA	155689018	155659453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_155660914_155661306_155661424_155668626_155668778_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688070_155688202_155688929
transcript_152631.known	chr4	+	1530	8	FSM	ENSG00000159788.20	ENST00000506631.5	1530	8	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	17.6542762351719	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTTTTCTTCGCACATC	3291451	True	NA	NA	False	GGGGCT	-21	NA	3293027	3418119	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_3293100_3342936_3343054_3386415_3386438_3414071_3414242_3414751_3414845_3415977_3416122_3416912_3417093_3417387
transcript_152653.known	chr4	-	10446	8	FSM	ENSG00000163956.13	ENST00000650182.1	10446	8	0	0	0	0	multi-exon	TRUE	canonical	3	759	junction_5	25.3964484099004	1486	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTCTTCTTTGATCCAT	-3526726	True	NA	-2	True	NA	NA	NA	3532422	3503611	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_3513037_3514751_3514929_3516115_3516199_3518033_3518193_3518870_3518992_3520071_3520194_3524906_3525052_3532208
transcript_152665.known	chr4	-	462	5	FSM	ENSG00000251669.6	ENST00000512092.5	462	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	1.92028643696715	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGAGCAGCTCCGAGGGAA	-3954250	False	NA	NA	False	NA	NA	NA	3955043	3947904	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_3948008_3948089_3948221_3951138_3951220_3953110_3953174_3954959
transcript_152672.known	chr4	-	624	3	FSM	ENSG00000251669.6	ENST00000507301.5	624	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	9	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAAAGGCGACACCTGGA	-3954570	True	NA	NA	False	NA	NA	NA	3955363	3942851	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_3943373_3953110_3953174_3955323
transcript_152679.nnic	chr4	+	698	2	Antisense	novelGene_ENSG00000253917.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	50	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	3927619	False	NA	20	True	AATAAA	-22	NA	3927679	3933044	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr4_+_3927996_3932662
transcript_152682.nnic	chr4	-	645	2	NNC	ENSG00000284727.1	novel	2276	2	NA	NA	-29	6153	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	0	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTTTTAATTATTTTT	-4107531	True	NA	-22	True	AATAAA	-26	NA	4107612	4101126	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_4101439_4107279
transcript_152683.known	chr4	-	2276	2	FSM	ENSG00000284727.1	ENST00000641316.1	2276	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTTAAAATTTCTCTCTT	-4107502	False	NA	NA	False	NA	NA	NA	4107583	4048210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_4050183_4107279
transcript_152684.known	chr4	-	1737	5	FSM	ENSG00000132406.12	ENST00000254742.6	1737	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	102.172342147961	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGAGTTTTGTTCATGC	-4246543	True	NA	-1	True	AATAAA	-17	NA	4248212	4235541	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_4236257_4237826_4237936_4240320_4240480_4246201_4246344_4247600
transcript_152685.known	chr4	-	1243	5	FSM	ENSG00000132406.12	ENST00000382753.5	1243	5	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	21.4709105535839	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGAGTTTTGTTCATGC	-4246554	True	NA	-1	True	AATAAA	-17	NA	4248223	4235541	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_4236257_4237826_4237936_4240320_4240480_4246201_4246344_4248105
transcript_152686.nnic	chr4	-	2073	5	NNC	ENSG00000132406.12	novel	1243	5	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	99.7606510604256	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGAGTTTTGTTCATGC	-4246563	True	NA	-1	True	AATAAA	-17	NA	4248232	4235541	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_4237078_4237826_4237936_4240320_4240480_4246201_4246344_4248105
transcript_152687.known	chr4	-	1554	10	FSM	ENSG00000145220.14	ENST00000343470.9	1554	10	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_4	28.7573930376345	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTGTGGCAAAAATTAC	-4282369	True	NA	0	True	AATAAA	-26	NA	4290154	4267700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_4268024_4268529_4268616_4273582_4273670_4274366_4274770_4279446_4279531_4279641_4279750_4281782_4281898_4283620_4283796_4286518_4286573_4290035
transcript_152690.nic	chr4	-	889	7	ISM	ENSG00000145220.14	ENST00000343470.9	1554	10	-51	6886	-51	-6883	5prime_fragment	FALSE	canonical	3	395	junction_1	26.1050229308887	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACTAAAGTTAGAAAACCA	-4282420	True	NA	61	True	AAGAAA	-38	NA	4290205	4274586	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_4274770_4279446_4279531_4279641_4279750_4281782_4281898_4283620_4283796_4286518_4286573_4290035
transcript_152696.known	chr4	+	2886	8	FSM	ENSG00000168826.16	ENST00000337872.9	2886	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	7.35679610833356	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGTTTCCTCTAGCAT	4289142	True	NA	NA	False	AATAAA	-18	NA	4290250	4321783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_4290353_4299926_4300098_4301988_4303092_4306137_4306185_4313040_4313115_4315635_4315719_4315808_4315971_4320639
transcript_152697.nic	chr4	+	2868	7	NIC	ENSG00000168826.16	novel	2886	8	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	8.54400374531753	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGTTTCCTCTAGCAT	4289113	True	NA	NA	False	AATAAA	-18	NA	4290221	4321783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_4290353_4299926_4300098_4301988_4303092_4313040_4313115_4315635_4315719_4315808_4315971_4320639
transcript_152699.nic	chr4	+	2668	6	NIC	ENSG00000168826.16	novel	2886	8	NA	NA	-29	-2	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	7.73045923603508	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATATGTTTCCTCTAGC	4289113	True	NA	NA	False	AATAAA	-16	NA	4290221	4321781	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_4290353_4299926_4300098_4301988_4303092_4306137_4306185_4313040_4313115_4320639
transcript_152700.known	chr4	+	2380	6	FSM	ENSG00000168826.16	ENST00000515012.5	2380	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	13.42236938845	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAGTGCCTTCTAACTAG	4289142	True	NA	NA	False	NA	NA	NA	4290250	4321398	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_4290353_4299926_4300098_4301988_4303092_4315635_4315719_4315808_4315971_4320639
transcript_152703.nic	chr4	+	2543	4	NIC	ENSG00000168826.16	novel	2886	8	NA	NA	-29	-6	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	14.290634073484	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATTATATGTTTCCTC	4289113	True	NA	NA	False	AATAAA	-12	NA	4290221	4321777	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_4290353_4299926_4300098_4301988_4303092_4320639
transcript_152705.known	chr4	-	2158	11	FSM	ENSG00000168818.10	ENST00000306200.7	2158	11	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_3	18.3098334236006	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGGCTCGGCCTCTGCAC	-4536197	True	NA	NA	False	AATAAA	-20	NA	4542048	4418967	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_4420130_4420863_4420945_4423517_4423588_4425163_4425223_4434769_4434859_4438393_4438510_4457190_4457258_4457422_4457501_4459371_4459488_4471638_4471707_4541796
transcript_152717.known	chr4	+	2650	6	FSM	ENSG00000168824.15	ENST00000397958.5	2650	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	55.4739578541138	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTGCCCAGTGGACT	NA	False	NA	14	True	AATAAA	-14	NA	4386255	4419058	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_4386644_4387118_4387174_4387603_4387759_4391474_4391592_4409572_4409684_4417234
transcript_152720.known	chr4	+	2254	5	FSM	ENSG00000168824.15	ENST00000433139.6	2254	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	30.7652401258303	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCATTTACATGTAACTT	4385307	True	NA	-45	True	NA	NA	NA	4386537	4418999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_4386644_4387603_4387759_4391474_4391592_4409572_4409684_4417234
transcript_152726.known	chr4	+	4172	9	FSM	ENSG00000168824.15	ENST00000421177.6	4172	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	65.1525853285961	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTGCCCAGTGGACT	NA	False	NA	14	True	AATAAA	-14	NA	4348139	4419058	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_4348472_4380982_4381074_4385059_4385202_4385472_4385556_4385856_4387174_4387603_4387759_4391474_4391592_4409572_4409684_4417234
transcript_152737.known	chr4	+	6201	5	FSM	ENSG00000247708.8	ENST00000656969.1	6201	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	9.31396800509858	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATACTTGATGCCAAAT	4539513	True	NA	NA	False	AATAAA	-17	NA	4542142	4710914	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_4542626_4544737_4544908_4648976_4649110_4649369_4649543_4705672
transcript_152738.known	chr4	+	3048	5	FSM	ENSG00000247708.8	ENST00000664571.1	3048	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	10.816653826392	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTATATCTCATGTGAAGG	4539501	True	NA	NA	False	NA	NA	NA	4542130	4731906	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_4542626_4544737_4544908_4648976_4649110_4649372_4649543_4729826
transcript_152741.known	chr4	+	1555	4	FSM	ENSG00000247708.8	ENST00000499430.7	1555	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	11.5854314646552	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCATCCATCCCTGGAC	4539562	True	NA	NA	False	NA	NA	NA	4542191	4730211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_4542626_4544737_4544908_4648976_4649543_4729826
transcript_152742.known	chr4	+	1048	1	FSM	ENSG00000280310.1	ENST00000624794.1	1048	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTTCTTCATAAATTAC	NA	False	NA	NA	False	ATTAAA	-2	NA	4820404	4821452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_4820400_4821500
transcript_152743.nnic	chr4	-	1122	5	NNC	ENSG00000170891.11	novel	989	4	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	32.3303263206544	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGTCCTGTTATATCTG	-5018701	True	NA	0	True	AATAAA	-21	NA	5019476	5014585	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_5015235_5016835_5016965_5017134_5017180_5018240_5018356_5019292
transcript_152744.known	chr4	-	989	4	FSM	ENSG00000170891.11	ENST00000307746.9	989	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	3.55902608401044	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGTCCTGTTATATCTG	-5018683	True	NA	0	True	AATAAA	-21	NA	5019458	5014585	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_5015235_5016835_5016965_5017134_5017180_5019292
transcript_152745.known	chr4	+	3535	12	FSM	ENSG00000152953.13	ENST00000282908.10	3535	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2.23421922317173	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCTTCTCACCACTTTG	5051342	True	NA	19	True	AATAAA	-13	NA	5051479	5500989	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_5051916_5139904_5139961_5168298_5168451_5331219_5331394_5398206_5398245_5416844_5416935_5446672_5446777_5456806_5456924_5460102_5460229_5466702_5466835_5468005_5468071_5498944
transcript_152750.known	chr4	-	4079	23	FSM	ENSG00000173040.13	ENST00000509670.1	4079	23	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	9.12403057230178	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTGTTTGTGTGTTTATA	NA	False	NA	NA	False	NA	NA	NA	5709063	5562788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_5563116_5565257_5565360_5568443_5568641_5574684_5574773_5576239_5576455_5584622_5584851_5615421_5615545_5618477_5618683_5622536_5622992_5625748_5625909_5628558_5628735_5631792_5632033_5640521_5640839_5663106_5663247_5665514_5665650_5681259_5681314_5685369_5685480_5689156_5689344_5691264_5691334_5694334_5694502_5697592_5697648_5708046_5708141_5708828
transcript_152751.known	chr4	-	4382	22	FSM	ENSG00000173040.13	ENST00000344408.10	4382	22	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_21	4.30366610578857	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGTTTATTACAAAACCCA	-5708016	True	NA	-2	True	AATAAA	-16	NA	5708559	5562438	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_5563116_5565257_5565360_5568443_5568641_5574684_5574773_5576239_5576455_5584622_5584851_5615421_5615545_5618477_5618683_5622536_5622992_5625748_5625909_5628558_5628735_5631792_5632033_5640513_5640839_5663106_5663247_5665514_5665650_5681259_5681314_5685369_5685480_5689156_5689344_5691264_5691334_5694334_5694502_5697592_5697648_5708285
transcript_152752.known	chr4	-	4828	22	FSM	ENSG00000173040.13	ENST00000310917.6	4828	22	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_21	4.78991760446841	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGTTTATTACAAAACCCA	NA	False	NA	-2	True	AATAAA	-16	NA	5709548	5562438	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_5563116_5565257_5565360_5568443_5568641_5574684_5574773_5576239_5576455_5584622_5584851_5615421_5615545_5618477_5618683_5622536_5622992_5625748_5625909_5628558_5628735_5631792_5632033_5640513_5640839_5663106_5663247_5665514_5665650_5681259_5681314_5685369_5685480_5689156_5689344_5691264_5691334_5694334_5694502_5697592_5697648_5708828
transcript_15277.nic	chr1	-	2725	10	NIC	ENSG00000163374.20	novel	2626	11	NA	NA	-238	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_9	127.303467507787	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTCATTGATTTGTGCA	-155689225	False	NA	-11	True	AATAAA	-21	NA	155689238	155659453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_155660914_155661306_155661424_155668626_155668718_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688929
transcript_152772.known	chr4	-	3081	14	FSM	ENSG00000072832.15	ENST00000511535.1	3081	14	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_13	188.254580242417	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGACTAGGGCACTTTCA	-5886546	False	NA	-24	True	AATAAA	-20	NA	5887813	5820783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_5821852_5825493_5825660_5828488_5828669_5835914_5836086_5836764_5836907_5839521_5839679_5841307_5841429_5843092_5843162_5849391_5849473_5851407_5851470_5856142_5856308_5861025_5861211_5866667_5866757_5887388
transcript_152773.known	chr4	-	2911	14	FSM	ENSG00000072832.15	ENST00000397890.6	2911	14	0	0	0	0	multi-exon	FALSE	canonical	3	655	junction_4	32.9284682860992	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGACTAGGGCACTTTCAT	-5875470	True	NA	-23	True	AATAAA	-21	NA	5888481	5820782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_5821852_5825493_5825660_5828488_5828669_5835914_5836086_5836764_5836907_5839521_5839679_5841307_5841429_5843092_5843162_5849391_5849473_5851407_5851470_5856142_5856308_5861025_5861211_5866667_5866757_5888227
transcript_152774.known	chr4	-	2764	14	FSM	ENSG00000072832.15	ENST00000512574.1	2764	14	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_13	187.992068320659	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGGTCCACACTAGAAAG	-5888924	False	NA	NA	False	NA	NA	NA	5890191	5821242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_5821852_5825493_5825660_5828488_5828669_5835914_5836086_5836764_5836907_5839521_5839679_5841307_5841429_5843092_5843162_5849391_5849473_5851407_5851470_5856142_5856308_5861025_5861211_5866667_5866757_5889624
transcript_152776.known	chr4	-	3174	14	FSM	ENSG00000072832.15	ENST00000324989.12	3174	14	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_13	169.123742380206	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGGTGGTGTCTGGA	-5891819	True	NA	-4	True	AATAAA	-40	NA	5893086	5820763	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_5821852_5825493_5825660_5828488_5828669_5835914_5836086_5836764_5836907_5839521_5839679_5841307_5841429_5843092_5843162_5849391_5849473_5851407_5851470_5856142_5856308_5861025_5861211_5866667_5866757_5892588
transcript_152802.known	chr4	-	2585	13	FSM	ENSG00000152969.20	ENST00000282924.9	2585	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_10	8.18365579812728	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGCCTTTTTTATTTG	-6199812	True	NA	-1	True	AATAAA	-18	NA	6200591	6053756	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_6054149_6056696_6056760_6060423_6060508_6062311_6062441_6064879_6065009_6078938_6078999_6080171_6080313_6081608_6081756_6084845_6084966_6085419_6085630_6105472_6105968_6112721_6112998_6200252
transcript_152804.nic	chr4	-	2102	12	NIC	ENSG00000152969.20	novel	2585	13	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_10	8.31209414593634	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGCCTTTTTTATTTG	-6199824	False	NA	-1	True	AATAAA	-18	NA	6200603	6053756	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_6054149_6056696_6056760_6060423_6060508_6062311_6062441_6064879_6065009_6078938_6078999_6080171_6080313_6081608_6081756_6084845_6084966_6085419_6085630_6112721_6112998_6200252
transcript_152809.nic	chr4	-	2248	3	ISM	ENSG00000152969.20	ENST00000282924.9	2585	13	-12	50590	-12	-41954	5prime_fragment	FALSE	canonical	3	19	junction_1	6	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATCAACACTAAAAGGAGA	-6199824	False	NA	21	True	TATAAA	-10	NA	6200603	6104346	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_6105968_6112721_6112998_6200252
transcript_152811.known	chr4	-	2605	14	FSM	ENSG00000152969.20	ENST00000473053.5	2605	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13.6966285317261	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGCCTTTTTTATTTG	-6199776	True	NA	-1	True	AATAAA	-18	NA	6200555	6053756	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_6054149_6054747_6054804_6056696_6056760_6060423_6060508_6062311_6062441_6064879_6065009_6078938_6078999_6080171_6080313_6081608_6081756_6084845_6084966_6085419_6085630_6105472_6105968_6112721_6112998_6200252
transcript_152813.known	chr4	+	2635	4	FSM	ENSG00000249896.2	ENST00000636374.1	2635	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGTAGATGCACGTGG	6222139	False	NA	NA	False	TATAAA	-23	NA	6222218	6234827	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_6222685_6226925_6227004_6228016_6228140_6232859
transcript_152817.known	chr4	+	3662	8	FSM	ENSG00000109501.15	ENST00000682275.1	3662	8	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_6	75.4769866264154	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGAACCTGCAGCGCTT	6267568	True	NA	18	True	AATAAA	-7	NA	6269849	6303251	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_6270015_6277450_6277688_6287092_6287176_6288986_6289132_6291196_6291368_6291916_6291998_6295004_6295190_6300656
transcript_152818.known	chr4	+	3640	8	FSM	ENSG00000109501.15	ENST00000226760.5	3640	8	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	29.8219204407682	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTTTCCTTCCTTTCTTT	6267568	True	NA	32	True	AATAAA	-21	NA	6269849	6303265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_6270015_6277450_6277688_6287092_6287176_6288986_6289132_6291196_6291368_6291916_6291998_6295040_6295190_6300656
transcript_152825.known	chr4	+	5129	19	FSM	ENSG00000013288.9	ENST00000285599.8	5129	19	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_10	4.86642566628035	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGACTACGGAGGCCAGG	6574744	True	NA	NA	False	NA	NA	NA	6575188	6623362	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_6575349_6576577_6576725_6578392_6578499_6586995_6587169_6589044_6589161_6593172_6593351_6594533_6594733_6597112_6597304_6598197_6598355_6600622_6600757_6605054_6605330_6609106_6609299_6609797_6610051_6610879_6610991_6611085_6611279_6614217_6614356_6617379_6617493_6619926_6620045_6621187
transcript_152828.known	chr4	+	2049	3	FSM	ENSG00000179010.16	ENST00000320912.8	2049	3	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_1	213	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACGAAAGACCTAAAAGGTT	NA	False	NA	20	True	AATAAA	-21	NA	6640090	6642729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_6640709_6640827_6641259_6641729
transcript_15283.known	chr1	-	2524	10	FSM	ENSG00000163374.20	ENST00000347088.9	2524	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	117.110584017367	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTGTGCAATTTGTTC	-155686390	True	NA	-3	True	AATAAA	-29	NA	155688698	155659445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155660914_155661306_155661424_155668626_155668778_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688658
transcript_152830.known	chr4	+	1574	2	FSM	ENSG00000179010.16	ENST00000382581.5	1574	2	0	0	0	0	multi-exon	FALSE	canonical	3	774	junction_1	0	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACGAAAGACCTAAAAGGTT	6627064	True	NA	20	True	AATAAA	-21	NA	6640684	6642729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_6641259_6641729
transcript_152831.known	chr4	+	1605	2	FSM	ENSG00000170846.17	ENST00000444232.3	1605	2	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTCCTTGATAGTGGTC	6672825	True	NA	9	True	AATAAA	-16	NA	6674087	6676047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_6674638_6674992
transcript_152832.known	chr4	+	2311	2	FSM	ENSG00000170846.17	ENST00000307533.10	2311	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTCCTTGATAGTGGTC	6673257	True	NA	9	True	AATAAA	-16	NA	6673450	6676047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_6674707_6674992
transcript_152834.known	chr4	+	2045	1	FSM	ENSG00000170846.17	ENST00000635031.1	2045	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGGTAAGGTAAATAAAC	6673883	False	NA	-25	True	NA	NA	NA	6673968	6676013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_6674000_6676000
transcript_152835.known	chr4	-	1578	2	FSM	ENSG00000178988.11	ENST00000320848.7	1578	2	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_1	0	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGGAATGGATGTTC	-6704969	True	NA	31	True	AATAAA	-16	NA	6709865	6707700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_6708644_6709230
transcript_152836.known	chr4	-	2127	1	FSM	ENSG00000178988.11	ENST00000500563.2	2127	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGGAATGGATGTTC	-6704931	True	NA	31	True	AATAAA	-16	NA	6709827	6707700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_6707700_6709800
transcript_152837.known	chr4	+	1491	1	FSM	ENSG00000186222.5	ENST00000320776.5	1491	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTTACGTATTTCCTTG	6711338	True	NA	40	True	AATAGA	-39	NA	6716173	6717664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_6716200_6717700
transcript_15284.known	chr1	-	2555	10	FSM	ENSG00000163374.20	ENST00000368330.6	2555	10	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_9	106.641779504107	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTGTGCAATTTGTTC	-155688175	True	NA	-3	True	AATAAA	-29	NA	155689000	155659445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155660914_155661306_155661424_155668626_155668778_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688929
transcript_152842.nic	chr4	+	1168	6	ISM	ENSG00000170871.12	ENST00000425103.5	7771	9	-31	23030	-26	201	5prime_fragment	FALSE	canonical	3	20	junction_1	5.74804314527997	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CGAGAAGGAAAACAAATTTA	6780769	True	NA	NA	False	NA	NA	NA	6782700	6861140	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_6782842_6824184_6824685_6842066_6842205_6857163_6857231_6858424_6858507_6860900
transcript_152844.nic	chr4	+	2890	6	ISM	ENSG00000170871.12	ENST00000425103.5	7771	9	-100	21377	-10	1854	5prime_fragment	FALSE	canonical	3	20	junction_1	5.74804314527997	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTGAAACTACACAAGTAT	6782589	False	NA	NA	False	AAAACA	-12	NA	6782631	6862793	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_6782842_6824184_6824685_6842066_6842205_6857163_6857231_6858424_6858507_6860900
transcript_152850.nnic	chr4	+	3701	15	NNC	ENSG00000132405.19	novel	4947	14	NA	NA	-80	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	87.8858547741771	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTATGTTCACCATCGT	6909239	False	NA	16	True	AATAAA	-17	NA	6909745	7033111	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_+_6909952_6923372_6924112_6967303_6967425_6994183_6994303_6996324_6996408_6999084_6999203_7001144_7001252_7004843_7004925_7006631_7006727_7009876_7009949_7010652_7010782_7014447_7014558_7025003_7025263_7030326_7030858_7032180
transcript_152851.known	chr4	+	4887	14	FSM	ENSG00000132405.19	ENST00000448507.5	4887	14	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	81.3505818034715	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCACCATCGTTTGTTTA	NA	False	NA	23	True	AATAAA	-24	NA	6909443	7033118	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_6909506_6923372_6924112_6967303_6967425_6994183_6994303_6996324_6996408_6999084_6999203_7001144_7001252_7004843_7004925_7006631_7006727_7009876_7009949_7010652_7010782_7014447_7014558_7025003_7025263_7030326
transcript_152853.known	chr4	+	4947	14	FSM	ENSG00000132405.19	ENST00000409757.9	4947	14	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	69.5638993636395	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGTTCACCATCGTTTG	6907832	True	NA	19	True	AATAAA	-20	NA	6909825	7033114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_6909952_6923372_6924112_6967303_6967425_6994183_6994303_6996324_6996408_6999084_6999203_7001144_7001252_7004843_7004925_7006631_7006727_7009876_7009949_7010652_7010782_7014447_7014558_7025003_7025263_7030326
transcript_15286.known	chr1	-	2690	10	FSM	ENSG00000163374.20	ENST00000359205.9	2690	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_8	116.59151018369	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTGTGCAATTTGTTC	-155686466	True	NA	-3	True	AATAAA	-29	NA	155688774	155659445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155660914_155661306_155661424_155668626_155668778_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155688070_155688202_155688658
transcript_152865.known	chr4	+	4149	12	FSM	ENSG00000132405.19	ENST00000451522.6	4149	12	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	29.7713046155589	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGTTCACCATCGTTTG	6987148	False	NA	19	True	AATAAA	-20	NA	6987161	7033114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_6987350_6994183_6994303_6996324_6996408_6999084_6999203_7001144_7001252_7004843_7004925_7006631_7006727_7009876_7009949_7010652_7010782_7014447_7014558_7025003_7025263_7030326
transcript_152870.nnic	chr4	+	4007	11	NIC	ENSG00000132405.19	novel	4149	12	NA	NA	70	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_7	78.6247416529937	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGTTCACCATCGTTTG	6985437	True	NA	19	True	AATAAA	-20	NA	6987231	7033114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_6987350_6994183_6994303_6996324_6996408_6999084_6999203_7001144_7001252_7004843_7004925_7006631_7006727_7010652_7010782_7014447_7014558_7025003_7025263_7030326
transcript_152876.nnic	chr4	+	3897	9	NIC	ENSG00000132405.19	novel	4149	12	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_5	81.8775762953448	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGTTCACCATCGTTTG	6987152	False	NA	19	True	AATAAA	-20	NA	6987165	7033114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_6987350_6994183_6994303_6996324_6996408_6999084_6999203_7001144_7001252_7010652_7010782_7014447_7014558_7025003_7025263_7030326
transcript_152879.nic	chr4	+	2123	2	ISM	ENSG00000132405.19	ENST00000409757.9	4947	14	-80	107825	-80	1518	5prime_fragment	FALSE	canonical	3	96	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGTGATCTGCTCCATA	6909239	False	NA	NA	False	AAAACA	-15	NA	6909745	6925289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_6909952_6923372
transcript_152880.known	chr4	-	1111	1	FSM	ENSG00000287104.1	ENST00000664676.1	1111	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAATGAGTGGATCTCATG	-6986897	True	NA	-7	True	ATTAAA	-14	NA	6987036	6985925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_6985900_6987000
transcript_152881.known	chr4	+	4369	2	FSM	ENSG00000173011.12	ENST00000310074.8	4369	2	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTCACCGCTTGCTTCT	7042543	True	NA	NA	False	ATTAAA	-17	NA	7043371	7057952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_7043850_7054061
transcript_152882.known	chr4	-	2153	1	FSM	ENSG00000173013.6	ENST00000310085.6	2153	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTAGTCCCGAGACACT	-7042963	True	NA	NA	False	ATTAAA	-19	NA	7043001	7040848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_7040800_7043000
transcript_152886.known	chr4	-	2653	4	FSM	ENSG00000109519.13	ENST00000264954.5	2653	4	0	0	0	0	multi-exon	FALSE	canonical	3	905	junction_2	13.9124245031395	241	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGGCCCCTCATTGACT	-7051333	True	NA	-1	True	AGTAAA	-25	NA	7068064	7058894	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_7061209_7062384_7062467_7064060_7064224_7067970
transcript_152892.known	chr4	-	7516	17	FSM	ENSG00000196526.11	ENST00000358461.6	7516	17	0	0	0	0	multi-exon	TRUE	canonical	3	44	junction_10	8.91255259451522	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCGGTGTCTTCACTGC	NA	False	NA	-42	True	AATAAA	-13	NA	7939926	7758714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_7763792_7768843_7769009_7772819_7773011_7774738_7774904_7778761_7778877_7786193_7786312_7793680_7793827_7800441_7800654_7809613_7809764_7816017_7816100_7819075_7819172_7838523_7838704_7843138_7843351_7855465_7855575_7868621_7868720_7871951_7872081_7939655
transcript_152905.nic	chr4	-	3399	16	NIC	ENSG00000163995.21	novel	2472	18	NA	NA	-30	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_2	5.35246568311175	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGCGGAAGTACAAGATCA	-8158621	True	NA	-13	True	AATAAA	-17	NA	8158862	7965326	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_7967104_7983263_7983345_7983546_7983555_8008058_8008198_8009049_8009103_8029655_8029777_8036148_8036296_8045163_8045242_8054187_8054247_8060966_8061055_8077627_8077722_8080675_8080803_8088168_8088285_8097098_8097283_8106493_8106638_8158679
transcript_152906.known	chr4	-	2291	16	FSM	ENSG00000163995.21	ENST00000407564.7	2291	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.20256347070045	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCTAGATGCCTACACAAT	-8158542	True	NA	NA	False	NA	NA	NA	8158783	7966358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_7967104_7983263_7983345_7983546_7983555_8008058_8008201_8009049_8009103_8029655_8029777_8036148_8036296_8045163_8045242_8054187_8054247_8060966_8061055_8077627_8077722_8080675_8080803_8088168_8088285_8097098_8097283_8106493_8106638_8158679
transcript_152916.known	chr4	-	2573	14	FSM	ENSG00000163995.21	ENST00000428004.6	2573	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	4.99467171715321	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGTTGCTTGTGTATGA	-8158591	True	NA	NA	False	AAGAAA	-1	NA	8158832	8007024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_8008201_8009049_8009103_8029655_8029777_8032647_8032681_8036148_8036296_8045163_8045242_8054187_8054247_8060966_8061055_8077627_8077722_8080675_8080803_8088168_8088285_8097098_8097283_8106493_8106638_8158679
transcript_152917.known	chr4	+	2539	9	FSM	ENSG00000170801.10	ENST00000307358.7	2539	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	6.56577299333445	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTCTCAGCCAGCAGGGC	8269548	True	NA	4	True	AATAAA	-14	NA	8269753	8307098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_8270354_8282436_8282537_8286560_8286784_8291369_8291565_8292320_8292354_8294086_8294202_8302462_8302512_8304183_8304280_8305970
transcript_152918.known	chr4	+	2023	7	FSM	ENSG00000170801.10	ENST00000382512.3	2023	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	3.78593889720018	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGTTAATCTAAAGTTCT	8269571	False	NA	15	True	AATAAA	-16	NA	8269776	8296474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_8270354_8282436_8282537_8286560_8286784_8291369_8291565_8292320_8292354_8294086_8294202_8295694
transcript_152922.known	chr4	-	2253	18	FSM	ENSG00000087008.16	ENST00000503233.5	2253	18	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_11	11.6372507722543	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGACTGGCACACATTCAG	-8427531	True	NA	NA	False	NA	NA	NA	8428486	8366960	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_8367081_8370907_8370995_8373560_8373629_8374977_8375153_8381491_8381608_8389172_8389287_8389611_8389735_8392332_8392454_8394619_8394743_8396936_8397120_8399555_8399653_8405954_8406044_8410211_8410356_8414291_8414382_8414853_8414929_8415765_8416000_8416377_8416536_8428350
transcript_15294.nic	chr1	-	3143	10	NIC	ENSG00000163374.20	novel	2723	11	NA	NA	-31	-4	intron_retention	FALSE	canonical	3	248	junction_2	50.8614676242132	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTGTTTCATTGATTTG	-155688792	False	NA	-15	True	AATAAA	-17	NA	155688805	155659457	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_155661424_155668626_155668778_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688070_155688202_155688658
transcript_152960.nnic	chr4	+	3099	11	NNC	ENSG00000155275.19	novel	2874	11	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_10	16.261918705983	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGGCCACTCTAAGTGG	8439380	True	NA	15	True	AATAAA	-19	NA	8440792	8476554	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_+_8441442_8446475_8446591_8449668_8449889_8451959_8452029_8452881_8452990_8454741_8454814_8463984_8464092_8465377_8465562_8467913_8468347_8471083_8471201_8475529
transcript_152961.known	chr4	+	2874	11	FSM	ENSG00000155275.19	ENST00000389737.5	2874	11	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	11.040380428228	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGCCACTCTAAGTGGC	8439364	True	NA	16	True	AATAAA	-20	NA	8440776	8476555	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_8441442_8446475_8446591_8449668_8449889_8451959_8452029_8452881_8452990_8454741_8454814_8463984_8464092_8465377_8465562_8467913_8468347_8471083_8471201_8475771
transcript_152962.nic	chr4	+	2345	11	NIC	ENSG00000155275.19	novel	2874	11	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_10	14.5657131648265	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAAGCTCTTTATTGCAA	8439375	True	NA	26	True	AATAAA	-33	NA	8440787	8493531	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_8441442_8446475_8446591_8449668_8449889_8451959_8452029_8452881_8452990_8454741_8454814_8463984_8464092_8465377_8465562_8467913_8468347_8471083_8471201_8493265
transcript_152993.known	chr4	+	2163	11	FSM	ENSG00000109625.19	ENST00000360986.9	2163	11	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	20.3656573672445	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTGGAATGAGAGGATCT	8591460	True	NA	11	True	ATTAAA	-18	NA	8592764	8619752	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_8592922_8599452_8599486_8601122_8601498_8603975_8604189_8605988_8606186_8606736_8606899_8607266_8607426_8612026_8612163_8614358_8614499_8618428_8618529_8619261
transcript_152997.known	chr4	+	2464	11	FSM	ENSG00000109625.19	ENST00000515606.1	2464	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	32.1323824202315	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACTGGAATGAGAGGATC	8591421	True	NA	10	True	ATTAAA	-17	NA	8592725	8619751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_8592922_8599452_8599583_8600956_8601498_8603975_8604189_8605988_8606186_8606736_8606899_8607266_8607426_8612026_8612163_8614358_8614499_8618428_8618529_8619261
transcript_152999.nic	chr4	+	2328	11	NIC	ENSG00000109625.19	novel	2163	11	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	32.1323824202315	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTGGAATGAGAGGATCT	8591392	True	NA	11	True	ATTAAA	-18	NA	8592696	8619752	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_8592922_8599452_8599583_8601122_8601498_8603975_8604189_8605988_8606186_8606736_8606899_8607266_8607426_8612026_8612163_8614358_8614499_8618428_8618529_8619261
transcript_153.known	SIRV5	+	1890	17	FSM	SIRV5A	SIRV501	1890	17	0	0	0	0	multi-exon	FALSE	canonical	3	2069	junction_14	3513.9813329888	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1056	10991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV5_+_1150_1987_2034_2119_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858
transcript_1530.known	chr1	-	2641	19	FSM	ENSG00000157881.16	ENST00000378466.9	2641	19	0	0	0	0	multi-exon	TRUE	canonical	3	159	junction_4	25.7336787541584	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGAGCCATCTGCGATGT	NA	False	NA	-5	True	AATAGA	-14	NA	2526596	2508536	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_2509061_2509861_2509931_2510056_2510158_2510677_2510783_2511337_2511388_2511627_2511684_2512887_2513040_2514001_2514090_2514353_2514467_2515561_2515718_2518163_2518265_2518515_2518598_2519142_2519325_2519800_2519955_2520321_2520415_2520722_2520907_2521100_2521316_2521717_2521801_2526463
transcript_153011.known	chr4	+	2136	10	FSM	ENSG00000109625.19	ENST00000315782.6	2136	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	32.5113465473362	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCACTGGAATGAGAGGA	8591451	True	NA	8	True	ATTAAA	-15	NA	8592755	8619749	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_8592922_8601122_8601498_8603975_8604189_8605988_8606186_8606736_8606899_8607266_8607426_8612026_8612163_8614358_8614499_8618428_8618529_8619261
transcript_153016.known	chr4	+	4343	3	FSM	ENSG00000155269.12	ENST00000382487.5	4343	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTCTCATTTCCATGGA	8580352	True	NA	NA	False	AATAAA	-14	NA	8580391	8590023	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_8581651_8582530_8582645_8587053
transcript_153017.known	chr4	-	1917	2	FSM	ENSG00000215612.8	ENST00000400677.5	1917	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTCACTGCTTTGTGAT	-8871644	True	NA	-7	True	AATAAA	-18	NA	8871839	8867047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_8868346_8871220
transcript_153020.known	chr4	+	780	1	FSM	ENSG00000244004.1	ENST00000468675.1	780	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTCAGACTTAAAACAGTG	NA	False	NA	NA	False	NA	NA	NA	9563170	9563950	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_9563200_9564000
transcript_153026.known	chr4	-	3142	15	FSM	ENSG00000071127.17	ENST00000382452.6	3142	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	423.642616277601	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGGTCACTGACTTTG	-10116727	False	NA	-10	True	ATTAAA	-15	NA	10116949	10074339	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_10075485_10077303_10077449_10077752_10077927_10078890_10079002_10081356_10081445_10083021_10083177_10084440_10084531_10087706_10087941_10088292_10088374_10088663_10088742_10097710_10097892_10098991_10099140_10103895_10103987_10116112_10116235_10116650
transcript_153064.known	chr4	-	2722	12	FSM	ENSG00000071127.17	ENST00000382451.6	2722	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	624.151973441095	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGGTCACTGACTTTG	-10116727	False	NA	-10	True	ATTAAA	-15	NA	10116949	10074339	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_10075485_10077303_10077449_10077752_10077927_10078890_10079002_10081356_10081445_10083021_10083177_10084440_10084531_10087706_10087941_10088292_10088374_10088663_10088742_10116112_10116235_10116650
transcript_153074.known	chr4	-	559	2	FSM	ENSG00000071127.17	ENST00000509600.1	559	2	0	0	0	0	multi-exon	FALSE	canonical	3	1511	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGTTTCTGTCTACGGTCA	-10084417	True	NA	NA	False	NA	NA	NA	10116868	10115893	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_10116235_10116650
transcript_153075.known	chr4	-	1691	12	FSM	ENSG00000071127.17	ENST00000502702.5	1691	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	624.151973441095	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTGGAGCATAACTAAAA	-10116505	False	NA	-2	True	AATAAA	-17	NA	10116727	10075148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_10075485_10077303_10077449_10077752_10077927_10078890_10079002_10081356_10081445_10083021_10083179_10084442_10084531_10087706_10087941_10088292_10088374_10088663_10088742_10116112_10116235_10116650
transcript_153076.known	chr4	-	6954	3	FSM	ENSG00000178163.8	ENST00000326756.4	6954	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	23	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAAACGTTATGCAGGTG	-10456331	True	NA	-11	True	AATAAA	-28	NA	10457426	10439879	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_10446540_10454804_10454989_10457316
transcript_153080.known	chr4	-	527	2	FSM	ENSG00000178163.8	ENST00000507515.1	527	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTACAGGGAAGGACGGTA	-10456310	True	NA	NA	False	NA	NA	NA	10457405	10446101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_10446540_10457316
transcript_153081.known	chr4	-	4196	2	FSM	ENSG00000178163.8	ENST00000503068.1	4196	2	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGGTATTCTTTTCTGT	-10456315	True	NA	NA	False	AATAAA	-29	NA	10457410	10450886	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_10454989_10457316
transcript_153082.known	chr4	-	1785	8	FSM	ENSG00000157869.16	ENST00000288723.9	1785	8	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	105.362542234527	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTTGGCAATTTTCTT	-13480737	True	NA	-11	True	AATAAA	-14	NA	13484340	13367723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_13368651_13369870_13369966_13376544_13376623_13381490_13381595_13460698_13460829_13474317_13474407_13479429_13479527_13484075
transcript_153084.known	chr4	-	1787	8	FSM	ENSG00000157869.16	ENST00000338176.8	1787	8	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	141.967659438798	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTTTGGCAATTTTCT	NA	False	NA	-12	True	AATAAA	-13	NA	13484365	13367724	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_13368651_13371794_13371868_13376544_13376623_13381490_13381595_13460698_13460829_13474317_13474407_13479429_13479527_13484075
transcript_153085.known	chr4	-	1690	7	FSM	ENSG00000157869.16	ENST00000330852.10	1690	7	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	45.3051382908777	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTTGGCAATTTTCTT	-13480737	True	NA	-11	True	AATAAA	-14	NA	13484340	13367723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_13368651_13376544_13376623_13381490_13381595_13460698_13460829_13474317_13474407_13479429_13479527_13484075
transcript_153086.known	chr4	-	1551	6	FSM	ENSG00000157869.16	ENST00000508274.5	1551	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	119.095927722152	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTTGGCAATTTTCTT	-13480728	True	NA	-11	True	AATAAA	-14	NA	13484331	13367723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_13368651_13376544_13376623_13381490_13381595_13474317_13474407_13479429_13479527_13484075
transcript_153089.known	chr4	-	10567	26	FSM	ENSG00000038219.13	ENST00000040738.10	10567	26	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_18	35.7188129701982	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAGTGGTAAGAATTTTA	-13623190	True	NA	-10	True	TATAAA	-21	NA	13627725	13568737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_13570129_13576837_13576992_13577402_13577488_13577581_13577632_13579927_13579974_13581019_13581055_13581131_13581208_13582236_13582311_13582651_13582737_13586395_13586476_13587698_13587772_13588721_13588793_13590385_13590447_13591922_13591967_13595859_13595945_13597103_13597169_13598945_13605085_13607116_13607190_13608529_13608669_13609294_13609407_13610933_13611101_13613511_13613662_13614195_13614811_13615311_13615503_13619942_13620068_13627344
transcript_153094.known	chr4	+	4989	35	FSM	ENSG00000048342.18	ENST00000506643.5	4989	35	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_30	7.67872403255685	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGTGCAAAGTGTTCTA	15478508	True	NA	12	True	AATAAA	-17	NA	15479203	15601549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_15479329_15480703_15480828_15502428_15502518_15502821_15502924_15510138_15510241_15511246_15511424_15514706_15514870_15515867_15516005_15516624_15516757_15527446_15527657_15528619_15528727_15533192_15533334_15536919_15537077_15537898_15538138_15540836_15541015_15550823_15550981_15553157_15553306_15555071_15555211_15557303_15557508_15559164_15559258_15560530_15560623_15563354_15563523_15567376_15567483_15567676_15567787_15569292_15569390_15570397_15570497_15574149_15574327_15579967_15580172_15586156_15586247_15587815_15587930_15589544_15589680_15596084_15596208_15597406_15597466_15599528_15599707_15601236
transcript_153098.nic	chr4	+	975	6	ISM	ENSG00000048342.18	ENST00000651385.1	3427	15	-19	28604	-7	0	5prime_fragment	FALSE	canonical	3	31	junction_2	5.8309518948453	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGGCTTGAGGGTTTT	15478501	True	NA	9	True	ATTAAA	-37	NA	15479196	15511672	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_15479329_15480703_15480828_15502428_15502518_15502821_15502924_15510138_15510241_15511246
transcript_153099.known	chr4	+	1521	5	FSM	ENSG00000048342.18	ENST00000515124.6	1521	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	7.24568837309472	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCTCATATGGCTGTTT	15469726	True	NA	NA	False	AATAAA	-14	NA	15469864	15482259	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_15470058_15475914_15475972_15478722_15478807_15480703_15480828_15481196
transcript_153100.known	chr4	+	754	3	FSM	ENSG00000048342.18	ENST00000652443.1	754	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	7.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCCAGTCTCAGATATTC	15478520	True	NA	NA	False	AATAAA	-18	NA	15479215	15481713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_15479329_15480703_15480828_15481196
transcript_153106.known	chr4	-	2951	12	FSM	ENSG00000118564.15	ENST00000511441.5	2951	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	165.955286221299	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTTGTGTTGTGATTTT	-15649333	True	NA	0	True	AATAAA	-28	NA	15655341	15605005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_15605800_15612265_15612415_15625251_15625978_15626872_15626956_15627884_15628034_15630665_15630792_15636493_15636677_15638507_15638695_15640787_15640884_15641523_15641628_15644492_15644709_15655203
transcript_153110.known	chr4	-	2837	11	FSM	ENSG00000118564.15	ENST00000412094.6	2837	11	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_10	110.804512543488	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTTGTGTTGTGATTTT	-15649374	True	NA	0	True	AATAAA	-28	NA	15655382	15605005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_15605800_15612265_15612415_15625251_15625978_15626872_15626956_15627884_15628034_15630665_15630792_15636493_15636677_15638507_15638695_15640787_15640884_15644492_15644658_15655203
transcript_153111.known	chr4	-	3488	11	FSM	ENSG00000118564.15	ENST00000341285.8	3488	11	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_3	22.8569464277274	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATGTATGTTCTGATTG	-15649349	True	NA	NA	False	GATAAA	-1	NA	15655357	15604380	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_15605800_15612265_15612415_15625251_15625978_15626872_15626956_15627884_15628034_15630665_15630792_15636493_15636677_15638507_15638695_15640787_15640884_15644492_15644709_15655203
transcript_153118.known	chr4	+	1979	9	FSM	ENSG00000109743.11	ENST00000265016.9	1979	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	3.64005494464026	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGTGTCCAGAATTGTG	15702856	True	NA	NA	False	AATAAA	-29	NA	15703064	15732787	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_15703333_15705514_15705642_15707510_15707647_15711806_15711890_15715284_15715362_15715706_15715800_15718906_15718994_15722874_15722935_15731739
transcript_153121.known	chr4	+	1136	4	FSM	ENSG00000237765.8	ENST00000505260.5	1136	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	99.6527303522922	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGAACAAAAATTTAATGAA	15678941	True	NA	NA	False	AATAAA	-16	NA	15681755	15689096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_15681902_15686235_15686463_15686931_15687149_15688550
transcript_153123.known	chr4	+	607	4	FSM	ENSG00000237765.8	ENST00000515697.5	607	4	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_3	75.5263015261718	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAATCAATAATTGAGCTA	15681718	False	NA	NA	False	AAAACA	-34	NA	15681732	15688613	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_15681902_15686235_15686463_15687000_15687149_15688550
transcript_153126.known	chr4	+	578	4	FSM	ENSG00000237765.8	ENST00000503600.5	578	4	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_3	13.7679176187089	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAATTGAGCTAAACTTG	15679020	True	NA	NA	False	AAAACA	-40	NA	15681834	15688619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_15681969_15686235_15686463_15687000_15687149_15688550
transcript_153129.known	chr4	+	958	4	FSM	ENSG00000237765.8	ENST00000502856.5	958	4	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_3	11.2249721603218	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTCTTTGTATTTCTTA	15679046	True	NA	8	True	AATAAA	-14	NA	15681860	15688972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_15682022_15686235_15686463_15687000_15687149_15688550
transcript_153131.known	chr4	+	559	4	FSM	ENSG00000237765.8	ENST00000508567.5	559	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	37.6150088247881	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTAAGTGCAAGACGTTA	15679010	True	NA	NA	False	AAAAAG	-4	NA	15681824	15687145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_15681902_15684849_15684960_15686235_15686463_15687000
transcript_153132.known	chr4	+	662	3	FSM	ENSG00000237765.8	ENST00000510920.5	662	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	24.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTTATTGATAAGCCTC	15681611	True	NA	NA	False	ATTAAA	-25	NA	15681661	15687312	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_15681785_15686235_15686463_15687000
transcript_153136.known	chr4	+	800	3	FSM	ENSG00000237765.8	ENST00000507305.5	800	3	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	72.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTAACACAGCTGCTGAAA	15678976	True	NA	NA	False	NA	NA	NA	15681790	15687462	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_15681902_15686235_15686463_15687000
transcript_153138.known	chr4	+	431	3	FSM	ENSG00000237765.8	ENST00000510186.5	431	3	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAGTAAGTGCAAGAC	15679091	False	NA	NA	False	NA	NA	NA	15681905	15687141	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_15681969_15686235_15686463_15687000
transcript_153142.known	chr4	+	748	3	FSM	ENSG00000237765.8	ENST00000513053.5	748	3	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	9	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATGCTGAACTTATTGAT	15678991	True	NA	NA	False	ATTAAA	-18	NA	15681805	15687305	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_15682022_15686235_15686463_15687000
transcript_153143.known	chr4	+	588	3	FSM	ENSG00000237765.8	ENST00000502502.5	588	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	16.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTGTCTAAAAAACAAAAT	15678942	True	NA	-29	True	AATGAA	-2	NA	15681756	15686568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_15681902_15684849_15684960_15686235
transcript_153144.known	chr4	+	524	3	FSM	ENSG00000237765.8	ENST00000514803.1	524	3	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	19	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTGCATGAATCCTTT	15679008	True	NA	9	True	AATAAA	-16	NA	15681822	15686606	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_15681902_15684885_15684960_15686235
transcript_153147.known	chr4	+	4287	2	FSM	ENSG00000237765.8	ENST00000422728.3	4287	2	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCTGTGAATAGCTCATA	15679012	True	NA	4	True	AATAAA	-15	NA	15681826	15690447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_15681902_15686235
transcript_153149.known	chr4	+	1027	2	FSM	ENSG00000237765.8	ENST00000503617.1	1027	2	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATCTGGAATTGTGAAT	15678942	True	NA	NA	False	AATATA	-25	NA	15681756	15687050	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_15681969_15686235
transcript_153151.known	chr4	+	639	2	FSM	ENSG00000237765.8	ENST00000510032.5	639	2	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTGCATGAATCCTTT	15678939	True	NA	9	True	AATAAA	-16	NA	15681753	15686606	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_15682022_15686235
transcript_153152.nnic	chr4	-	920	2	NNC	ENSG00000118564.15	novel	591	3	NA	NA	-43	-7833	at_least_one_novel_splicesite	FALSE	canonical	3	381	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATAGTTTGCCTGTGATC	-15681711	False	NA	-7	True	ATTAAA	-42	NA	15681722	15667563	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_15668041_15681279
transcript_153153.nnic	chr4	-	749	2	NNC	ENSG00000118564.15	novel	532	4	NA	NA	-5	-7833	at_least_one_novel_splicesite	FALSE	canonical	3	179	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATAGTTTGCCTGTGATC	-15673735	True	NA	-7	True	ATTAAA	-42	NA	15681624	15667563	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_15668041_15681352
transcript_153165.known	chr4	-	3927	27	FSM	ENSG00000007062.12	ENST00000513946.2	3927	27	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_25	86.6301736247165	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCATTTGAATAAAAAGGAAC	-16083672	False	2973	-33	True	NA	NA	NA	16083704	15968257	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_15969369_15971042_15971083_15979394_15979464_15979880_15979905_15980276_15980302_15980421_15980538_15984262_15984356_15985759_15985829_15985956_15986038_15987662_15987717_15989731_15989825_15991221_15991294_15992247_15992392_15993986_15994072_15998384_15998489_16000495_16000620_16006537_16006691_16008948_16009109_16013274_16013339_16016165_16016241_16018322_16018541_16023325_16023416_16024294_16024359_16025191_16025313_16033303_16033510_16075686_16076119_16083664
transcript_153168.known	chr4	-	4014	27	FSM	ENSG00000007062.12	ENST00000508167.5	4014	27	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_26	48.7381756256183	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTCTGTATGTTACTTC	-16083700	False	NA	-5	True	AATAAA	-16	NA	16083732	15968229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_15969369_15971042_15971083_15979394_15979464_15979880_15979905_15980421_15980538_15984262_15984356_15985759_15985829_15985956_15986038_15987662_15987717_15989731_15989825_15991221_15991294_15992247_15992392_15993986_15994072_15998384_15998489_16000495_16000620_16006537_16006691_16008948_16009109_16013274_16013339_16016165_16016241_16018322_16018541_16023325_16023416_16024294_16024359_16025191_16025313_16033303_16033510_16038945_16039002_16075686_16076119_16083664
transcript_153169.known	chr4	-	4349	27	FSM	ENSG00000007062.12	ENST00000505450.5	4349	27	0	0	0	0	multi-exon	TRUE	canonical	3	126	junction_26	36.4620253132054	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTGTATGTTACTTCCT	-16084346	False	NA	-3	True	AATAAA	-18	NA	16084378	15968227	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_15969369_15971042_15971083_15979394_15979464_15979880_15979905_15980421_15980538_15984262_15984356_15985759_15985829_15985956_15986038_15987662_15987717_15989731_15989825_15991221_15991294_15992247_15992392_15993986_15994072_15998384_15998489_16000495_16000620_16006537_16006691_16008948_16009109_16013274_16013339_16016165_16016241_16018322_16018541_16023325_16023416_16024294_16024359_16025191_16025313_16033303_16033510_16038945_16039002_16075686_16076119_16083977
transcript_15318.known	chr1	+	729	4	FSM	ENSG00000132676.16	ENST00000465375.5	729	4	0	0	0	0	multi-exon	FALSE	canonical	3	451	junction_3	24.0970260959038	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTTGTGGATTTTGTGA	155678085	True	NA	NA	False	AATAGA	-33	NA	155689093	155721989	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155689175_155709772_155709825_155717005_155717129_155721516
transcript_153182.known	chr4	-	4521	14	FSM	ENSG00000169762.17	ENST00000405303.7	4521	14	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_12	8.00147915319744	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAAGTCTGATTTTTTT	-16225832	True	NA	NA	False	AATATA	-16	NA	16226471	16160504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_16163538_16166632_16166794_16170652_16170730_16174203_16174273_16174669_16174730_16176118_16176229_16179576_16179658_16186534_16186605_16186780_16186879_16188219_16188356_16191360_16191524_16202461_16202581_16213767_16213899_16226258
transcript_153186.known	chr4	-	2476	9	FSM	ENSG00000169744.13	ENST00000441778.6	2476	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	68.4027594472621	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTGAATCTGGCTATTT	-16898315	False	NA	-7	True	AATAAA	-18	NA	16898594	16501540	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_16502874_16505839_16505983_16508534_16508687_16511980_16512105_16585921_16586006_16588709_16588833_16595702_16595876_16759157_16759261_16898353
transcript_153188.known	chr4	-	2295	8	FSM	ENSG00000169744.13	ENST00000515064.5	2295	8	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	51.183144546953	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTGAATCTGGCTATTT	-16898283	False	NA	-7	True	AATAAA	-18	NA	16898562	16501540	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_16502874_16508540_16508687_16511980_16512105_16585921_16586006_16588709_16588833_16595702_16595876_16759157_16759261_16898353
transcript_15319.known	chr1	-	3073	10	FSM	ENSG00000163374.20	ENST00000368339.9	3073	10	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_3	50.5556776555302	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGCAATTTGTTCAGT	-155686348	True	NA	0	True	AATAAA	-32	NA	155688656	155659442	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155660914_155661306_155661424_155668626_155668778_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688070
transcript_153190.known	chr4	-	2626	8	FSM	ENSG00000169744.13	ENST00000502640.5	2626	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	69.2510959170632	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAGCAAGTGAATCTGGC	-16893495	True	NA	-12	True	AATAAA	-13	NA	16898634	16501545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_16503132_16508534_16508687_16511980_16512105_16585921_16586006_16588709_16588833_16595702_16595876_16759157_16759261_16898353
transcript_153191.nic	chr4	-	1016	7	ISM	ENSG00000169744.13	ENST00000304523.10	2384	8	-71	7100	-38	3344	5prime_fragment	FALSE	canonical	3	146	junction_1	24.8439574589521	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCACCAGCAGCACTTCCA	-16898437	False	NA	15	True	AAAAAG	-7	NA	16898716	16508640	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_16508687_16511980_16512105_16585921_16586006_16588709_16588833_16595702_16595876_16759157_16759261_16898353
transcript_153197.known	chr4	-	1507	7	FSM	ENSG00000151552.12	ENST00000281243.10	1507	7	0	0	0	0	multi-exon	FALSE	canonical	3	517	junction_4	20.0969870599771	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGCCTGATTCTGCCTT	-17507668	True	NA	-8	True	AATAAA	-17	NA	17512090	17486394	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_17487237_17490661_17490746_17492231_17492341_17501718_17501860_17504378_17504476_17509270_17509364_17511949
transcript_15320.known	chr1	-	5118	21	FSM	ENSG00000116580.20	ENST00000361040.9	5118	21	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_20	54.3728792689885	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTAAATAACTGGGCACGG	-155853242	True	NA	NA	False	NA	NA	NA	155857204	155764426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155766710_155767424_155767542_155771066_155771218_155773065_155773211_155775001_155775174_155776394_155776482_155777621_155777821_155783985_155784090_155785333_155785375_155795049_155795152_155804948_155805142_155813633_155813805_155814329_155814450_155815804_155815901_155816211_155816263_155820605_155820657_155821473_155821549_155822285_155822477_155826836_155827029_155853275_155853807_155857158
transcript_153202.known	chr4	-	1278	6	FSM	ENSG00000151552.12	ENST00000428702.6	1278	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	204.4524394572	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAAATCACATCTTATAT	-17507664	True	NA	-16	True	AATAAA	-24	NA	17512086	17486526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_17487237_17490661_17490746_17492231_17492341_17501718_17501860_17504378_17504476_17511949
transcript_153203.known	chr4	-	1374	6	FSM	ENSG00000151552.12	ENST00000507439.5	1374	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	209.519831996878	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACACAGGCCTGATTCTGC	-17507647	True	NA	-11	True	AATAAA	-14	NA	17512069	17486397	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_17487237_17490661_17490746_17501718_17501860_17504378_17504476_17509270_17509364_17511949
transcript_153216.known	chr4	+	1876	13	FSM	ENSG00000002549.13	ENST00000606142.5	1876	13	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_5	34.2474654374435	520	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTGTCAGAAACAATAAAT	17571282	True	NA	-28	True	NA	NA	NA	17577494	17607934	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_17577568_17579823_17579940_17581759_17581815_17582287_17582394_17583482_17583643_17584971_17585137_17588818_17588978_17595409_17595535_17597045_17597135_17598455_17598559_17604587_17604668_17606828_17606939_17607399
transcript_153227.known	chr4	+	10858	4	FSM	ENSG00000118579.13	ENST00000237380.12	10858	4	0	0	0	0	multi-exon	FALSE	canonical	3	836	junction_3	51.0511725842044	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGAGATGGATGTGTT	17603737	True	NA	17	True	AATAAA	-30	NA	17614640	17634105	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_17614814_17619900_17619968_17621586_17621700_17623600
transcript_153237.nnic	chr4	-	2960	4	NNC	ENSG00000163257.11	novel	4547	3	NA	NA	-8	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.2089285540757	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACAGAGTATGGTCATTT	-17802593	True	NA	-9	True	AATAAA	-20	NA	17810766	17800658	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_17801858_17803434_17804757_17805106_17805226_17810446
transcript_15324.known	chr1	-	4801	22	NNC	ENSG00000116580.20	novel	4973	21	NA	NA	0	-60	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	55.2213028662801	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAATGAGATGGAAAGGAT	-155857126	False	NA	NA	False	NA	NA	NA	155857295	155764843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_155764883_155764885_155766710_155767424_155767542_155771066_155771218_155773065_155773211_155775001_155775174_155776394_155776482_155777621_155777821_155783985_155784090_155785333_155785375_155795049_155795152_155804948_155805142_155813633_155813805_155814329_155814450_155815804_155815901_155816211_155816263_155820605_155820657_155821473_155821549_155822285_155822477_155826836_155827029_155853275_155853807_155857146
transcript_153248.known	chr4	-	4547	3	FSM	ENSG00000163257.11	ENST00000382247.6	4547	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTATGGTCATTTGTCC	-17802584	True	NA	-5	True	AATAAA	-24	NA	17810757	17800654	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_17804772_17805106_17805226_17810446
transcript_153250.nnic	chr4	-	2004	3	NIC	ENSG00000163257.11	novel	4547	3	NA	NA	-8	1120	combination_of_known_splicesites	FALSE	canonical	2	12	junction_1	6.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCGGGCGCAGCAGTGC	-17802593	True	NA	NA	False	AATAAA	-5	NA	17810766	17803191	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_17804757_17805106_17805226_17810446
transcript_153253.known	chr4	-	757	2	FSM	ENSG00000163257.11	ENST00000507768.1	757	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCACAGTGGTATGGGCCA	-17802585	True	NA	NA	False	AATATA	-19	NA	17810758	17804311	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_17804757_17810446
transcript_153256.nnic	chr4	-	1900	2	NIC	ENSG00000163257.11	novel	4547	3	NA	NA	-8	1120	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCGGGCGCAGCAGTGC	-17802593	True	NA	NA	False	AATAAA	-5	NA	17810766	17803191	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_17804772_17810446
transcript_153257.known	chr4	-	533	2	FSM	ENSG00000163257.11	ENST00000507731.1	533	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTTGCATGTTTTAACC	-17802538	True	NA	1	True	AATAAA	-22	NA	17810711	17809424	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_17809693_17810446
transcript_153258.known	chr4	-	5009	7	FSM	ENSG00000178177.16	ENST00000382226.5	5009	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	53.93720628863	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAAGAAAAGAA	-18021850	False	NA	29	True	NA	NA	NA	18021860	17880628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_17884753_17886067_17886162_17909093_17909346_17961902_17962033_17962969_17963050_17972819_17972886_18021597
transcript_153260.known	chr4	+	4587	21	FSM	ENSG00000109805.10	ENST00000251496.7	4587	21	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_8	45.1290095171609	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTAGTATTCTGAGTATT	17803089	True	NA	4	True	AATAAA	-14	NA	17810978	17844865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_17811189_17812220_17812425_17812916_17813146_17814852_17814999_17815273_17815359_17817260_17817454_17817938_17818089_17822982_17823124_17823646_17823771_17824967_17825058_17825381_17825562_17828277_17828389_17830996_17831117_17834298_17834524_17837158_17837341_17837626_17837802_17839675_17839838_17840070_17840210_17840606_17840694_17842309_17842380_17843301
transcript_153265.nnic	chr4	+	3177	20	NIC	ENSG00000109805.10	novel	4587	21	NA	NA	-28	66	combination_of_known_splicesites	FALSE	canonical	3	37	junction_18	97.3027374470084	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATGTCTTTCTGAAGAT	17803061	True	NA	16	True	AATAAA	-33	NA	17810950	17843514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_17811189_17812220_17812425_17812916_17813146_17814852_17814999_17815273_17815359_17817260_17817454_17817938_17818089_17822982_17823124_17823646_17823771_17824967_17825058_17825381_17825562_17828277_17828389_17830996_17831117_17834298_17834524_17837158_17837341_17837626_17837802_17839675_17839838_17840070_17840210_17842309_17842380_17843301
transcript_153268.nic	chr4	+	2836	18	ISM	ENSG00000109805.10	ENST00000251496.7	4587	21	-49	4735	-49	2969	5prime_fragment	FALSE	canonical	3	352	junction_8	45.1961507378946	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAATAAAGAATTTGGTGA	17803040	True	NA	19	True	NA	NA	NA	17810929	17840130	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_17811189_17812220_17812425_17812916_17813146_17814852_17814999_17815273_17815359_17817260_17817454_17817938_17818089_17822982_17823124_17823646_17823771_17824967_17825058_17825381_17825562_17828277_17828389_17830996_17831117_17834298_17834524_17837158_17837341_17837626_17837802_17839675_17839838_17840070
transcript_153269.nic	chr4	+	2865	18	ISM	ENSG00000109805.10	ENST00000251496.7	4587	21	-7	4664	-7	3040	5prime_fragment	FALSE	canonical	3	352	junction_8	45.1961507378946	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGATGGTAATCACATAC	17803082	True	NA	9	True	NA	NA	NA	17810971	17840201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_17811189_17812220_17812425_17812916_17813146_17814852_17814999_17815273_17815359_17817260_17817454_17817938_17818089_17822982_17823124_17823646_17823771_17824967_17825058_17825381_17825562_17828277_17828389_17830996_17831117_17834298_17834524_17837158_17837341_17837626_17837802_17839675_17839838_17840070
transcript_153272.nic	chr4	+	2155	14	ISM	ENSG00000109805.10	ENST00000251496.7	4587	21	-141	10536	-141	-2832	5prime_fragment	TRUE	canonical	3	352	junction_8	35.2433635533871	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGCTTTAAAGGCAATC	17810818	False	NA	NA	False	AATAAA	-3	NA	17810837	17834329	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_17811189_17812220_17812425_17812916_17813146_17814852_17814999_17815273_17815359_17817260_17817454_17817938_17818089_17822982_17823124_17823646_17823771_17824967_17825058_17825381_17825562_17828277_17828389_17830996_17831117_17834298
transcript_153273.nic	chr4	+	2224	14	ISM	ENSG00000109805.10	ENST00000251496.7	4587	21	-141	10467	-141	-2763	5prime_fragment	FALSE	canonical	3	352	junction_8	35.2433635533871	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAACACTTCATTGTGAA	17810818	False	NA	NA	False	ACTAAA	-5	NA	17810837	17834398	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_17811189_17812220_17812425_17812916_17813146_17814852_17814999_17815273_17815359_17817260_17817454_17817938_17818089_17822982_17823124_17823646_17823771_17824967_17825058_17825381_17825562_17828277_17828389_17830996_17831117_17834298
transcript_153277.known	chr4	+	8053	37	FSM	ENSG00000145147.20	ENST00000504154.6	8053	37	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_8	4.71666339484247	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTGGTGGTGTTCTTAG	20249649	True	NA	20	True	ATTAAA	-20	NA	20251904	20620561	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_20253995_20256671_20256744_20257867_20257940_20268809_20268882_20467751_20467824_20480715_20480788_20486199_20486272_20488818_20488983_20491760_20491900_20510494_20510567_20511065_20511138_20519381_20519454_20523759_20523904_20524013_20524178_20525148_20525173_20528948_20529100_20531983_20532059_20533571_20533716_20539440_20539585_20541452_20541620_20542493_20542627_20546030_20546100_20548487_20548560_20549056_20549129_20550826_20550899_20553804_20553969_20567261_20567387_20567517_20567616_20568864_20569005_20589643_20589738_20595696_20595835_20596414_20596656_20598264_20598396_20610012_20610168_20616909_20617199_20617438_20617651_20618767
transcript_153283.known	chr4	+	6309	9	FSM	ENSG00000163138.19	ENST00000503585.6	6309	9	0	0	0	0	multi-exon	TRUE	canonical	3	5	junction_8	6.50840802347241	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTTTTGTTTCAGTAAA	20699800	True	NA	NA	False	ATTAAA	-17	NA	20700457	20732557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_20700788_20704465_20704534_20704659_20704815_20707802_20707871_20709682_20709774_20712787_20712923_20713431_20713540_20724807_20724889_20727284
transcript_153286.known	chr4	+	2073	8	FSM	ENSG00000163138.19	ENST00000360916.9	2073	8	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_4	5.08298482133063	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGATTTTGTTGTGCT	20699755	True	NA	10	True	ATTAAA	-22	NA	20700412	20728357	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_20700788_20704465_20704534_20704659_20704815_20707802_20707871_20709682_20709774_20712787_20712923_20713431_20713540_20727284
transcript_153290.known	chr4	+	1720	5	FSM	ENSG00000163138.19	ENST00000444671.6	1720	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	5.67890834580027	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTCAGCAATTAAAATGTT	20699778	True	NA	-26	True	NA	NA	NA	20700435	20728321	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_20700788_20704465_20704534_20704659_20704815_20713431_20713540_20727284
transcript_153291.known	chr4	+	1233	9	FSM	ENSG00000163138.19	ENST00000506702.5	1233	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.65567599889128	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTGACTTCTTGGAATC	20699801	True	NA	11	True	AATAAA	-19	NA	20700458	20752900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_20700618_20704465_20704534_20704659_20704815_20707802_20707871_20709682_20709774_20712787_20712923_20713431_20713540_20727284_20727398_20752564
transcript_153292.known	chr4	-	4577	19	FSM	ENSG00000152990.14	ENST00000334304.10	4577	19	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_7	28.4644027202789	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTTATTTTTATATTT	-22512362	True	NA	-2	True	AATAAA	-21	NA	22516066	22387375	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_22388948_22389087_22389184_22392544_22392691_22401430_22401555_22402674_22402800_22413181_22413391_22413600_22413815_22420885_22421090_22424190_22424353_22435310_22435467_22436439_22436642_22438255_22438421_22442649_22442864_22444972_22445134_22447439_22447512_22454865_22454938_22461736_22461809_22473771_22473844_22515527
transcript_153312.known	chr4	-	2998	14	FSM	ENSG00000109606.13	ENST00000336812.5	2998	14	0	0	0	0	multi-exon	FALSE	canonical	3	1041	junction_5	118.504437786726	1680	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGCCAAAGCCCTTTGG	-24548931	True	NA	-13	True	AATAAA	-16	NA	24584554	24527474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_24528042_24529600_24529771_24532863_24533055_24537050_24537174_24540107_24540300_24540839_24540949_24541872_24542023_24542939_24543027_24548854_24549023_24554724_24554944_24556250_24556411_24570653_24570848_24576242_24576679_24584322
transcript_153343.known	chr4	+	1416	2	FSM	ENSG00000109610.6	ENST00000382120.4	1416	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGCGTCGAGGTCTTGG	24794917	True	NA	13	True	ATTAAA	-15	NA	24795572	24800842	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_24795652_24799505
transcript_153344.known	chr4	-	3869	12	FSM	ENSG00000181982.19	ENST00000504487.5	3869	12	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	3.42088867676851	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACAGCTGTCTTTTGTCT	-24912859	False	NA	-5	True	ATTAAA	-18	NA	24912886	24806116	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_24808820_24819858_24819976_24822496_24822574_24831505_24831651_24834947_24835033_24836435_24836509_24837227_24837401_24838155_24838273_24853071_24853180_24873680_24873720_24876535_24876698_24912816
transcript_153346.known	chr4	-	6495	8	FSM	ENSG00000153012.12	ENST00000382114.9	6495	8	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_6	10.4978131833565	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTTTTGATCTCTGGTC	-25030194	True	NA	NA	False	AATAAA	-18	NA	25030946	24998846	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_25004269_25012334_25012500_25017988_25018159_25019166_25019239_25024819_25024892_25026867_25026940_25028506_25028579_25030496
transcript_153347.known	chr4	-	5503	11	FSM	ENSG00000109618.13	ENST00000382103.7	5503	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	4.72122865364515	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACAGTACGTTATTTTAC	-25160005	True	NA	-7	True	AATAAA	-41	NA	25160449	25120013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_25124226_25125693_25125785_25127263_25127358_25144773_25144866_25145003_25145134_25151959_25152063_25154997_25155152_25156036_25156196_25156855_25156975_25158952_25159108_25160255
transcript_153351.known	chr4	-	5802	12	FSM	ENSG00000109618.13	ENST00000681948.1	5802	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	8.87377043048177	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGATGAAAATAAATTATATA	-25160102	True	NA	-60	True	NA	NA	NA	25160546	25120066	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_25124226_25125693_25125785_25127263_25127358_25144773_25144866_25145003_25145134_25151959_25152063_25154997_25155152_25156036_25156196_25156855_25156975_25158952_25159108_25159509_25159765_25160255
transcript_153354.known	chr4	-	2072	5	FSM	ENSG00000109618.13	ENST00000681640.1	2072	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	3.63145976158349	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTTATTAAATTTTAAAAC	-25160019	True	NA	NA	False	NA	NA	NA	25160463	25153720	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_25155152_25156036_25156196_25156855_25156975_25158952_25159108_25160255
transcript_153355.known	chr4	+	3594	10	FSM	ENSG00000038210.14	ENST00000264864.8	3594	10	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	11.8602979164381	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTG	25230996	True	NA	NA	False	ATTAAA	-18	NA	25234032	25279204	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_25234432_25252320_25252476_25255064_25255266_25256542_25256675_25259036_25259191_25260523_25260592_25263749_25263850_25268442_25268577_25269143_25269204_25277013
transcript_153358.known	chr4	+	383	2	FSM	ENSG00000281501.1	ENST00000510415.1	383	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCTGTCGGAATACTGG	25160186	True	NA	7	True	ATTAAA	-17	NA	25160640	25161687	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_25160754_25161417
transcript_153361.known	chr4	+	2797	13	FSM	ENSG00000168228.16	ENST00000302874.9	2797	13	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_7	22.6683516530573	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTGGCTCTCAGTTCTC	25309449	True	NA	11	True	ATTAAA	-16	NA	25312773	25370383	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_25312937_25314045_25314165_25315317_25315401_25333182_25333459_25333907_25333989_25345547_25345621_25349491_25349643_25351588_25351690_25361858_25361981_25362225_25362302_25364453_25364506_25365021_25365167_25369028
transcript_153368.known	chr4	+	1504	9	FSM	ENSG00000168228.16	ENST00000505451.5	1504	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	49.0661224777341	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGACTACAAACATGTGCCA	25309460	True	NA	NA	False	NA	NA	NA	25312784	25352541	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_25312937_25314045_25314165_25315317_25315401_25333182_25333459_25333907_25333989_25345547_25345621_25349491_25349643_25351588_25351690_25352073
transcript_153372.known	chr4	+	938	11	NNC	ENSG00000168228.16	novel	2797	13	NA	NA	23	-2856	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	74.8668150785113	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTCCTGTCAAATATTAG	25309493	True	NA	6	True	AATAAA	-17	NA	25312817	25349685	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_+_25312937_25314045_25314165_25315317_25315394_25333178_25333286_25333286_25333296_25333296_25333303_25333303_25333310_25333310_25333459_25333907_25333989_25345547_25345621_25349491
transcript_153376.known	chr4	+	2599	29	FSM	ENSG00000053900.11	ENST00000510092.5	2599	29	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_18	58.9432773858019	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTCATATTCTGCTTC	25372216	True	NA	9	True	AATAAA	-12	NA	25377292	25418489	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_25377345_25377417_25377557_25380373_25380480_25383260_25383394_25388499_25388575_25388716_25388744_25388837_25388883_25390135_25390221_25390910_25391016_25392337_25392422_25393804_25393892_25394309_25394375_25394670_25394714_25394828_25394906_25396663_25396765_25396847_25396900_25402970_25403027_25405572_25405623_25406828_25406886_25407196_25407254_25409697_25409792_25413644_25413743_25414323_25414386_25414465_25414505_25414598_25414701_25415465_25415541_25416424_25416599_25417615_25417740_25418154
transcript_153385.known	chr4	+	4115	13	FSM	ENSG00000157765.13	ENST00000382051.8	4115	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.7950549357115	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGTGTTGTTTTTAATT	25655822	True	NA	NA	False	AATAAA	-17	NA	25655850	25678748	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_25655891_25662497_25662613_25662704_25662843_25664201_25664331_25666127_25666272_25667879_25667992_25669646_25669843_25670737_25670834_25671600_25671722_25673086_25673255_25674295_25674413_25674504_25674630_25676134
transcript_153387.known	chr4	-	4543	24	FSM	ENSG00000091490.11	ENST00000399878.8	4543	24	0	0	0	0	multi-exon	TRUE	canonical	3	282	junction_4	23.478019322429	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAGAAAGTGGTTTTTT	-25862158	True	NA	-7	True	AATAAA	-20	NA	25862988	25747432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_25748565_25757533_25757607_25757687_25757791_25758940_25759069_25765325_25765436_25767524_25767610_25767739_25767831_25776276_25776361_25779075_25779204_25782241_25782419_25784227_25784291_25788223_25788365_25790454_25790575_25802282_25802463_25804540_25804753_25818137_25818279_25819807_25819941_25821995_25822129_25830097_25830157_25832994_25833111_25833447_25833570_25835196_25835324_25847293_25847865_25862674
transcript_153396.nic	chr4	-	2126	11	ISM	ENSG00000091490.11	ENST00000399878.8	4543	24	-18	54850	-18	-24667	5prime_fragment	FALSE	canonical	3	282	junction_2	13.6341483048997	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTATGAGAGAGAAAAAAGGT	-25862987	False	NA	NA	False	NA	NA	NA	25863006	25802282	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_25802463_25804540_25804753_25818137_25818279_25819807_25819941_25821995_25822129_25830097_25830157_25832994_25833111_25833447_25833570_25835196_25835324_25847293_25847865_25862674
transcript_153399.known	chr4	+	935	3	FSM	ENSG00000250317.9	ENST00000506197.3	919	3	-16	0	-16	0	multi-exon	FALSE	canonical	3	587	junction_2	17.5	217	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCAGTGGTGTCTTTTT	25910414	True	NA	14	True	ATTAAA	-15	NA	25914203	25929812	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_25914423_25928312_25928370_25929153
transcript_153405.known	chr4	+	1766	13	FSM	ENSG00000168214.22	ENST00000681679.1	1766	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	541.512824306949	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTGTGGTTTCTTGGGA	26313444	True	NA	NA	False	AAAAAG	-29	NA	26321010	26431083	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_26321049_26362445_26362629_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26422131_26422157_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_153407.known	chr4	+	1992	12	FSM	ENSG00000168214.22	ENST00000342295.6	1992	12	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	490.833260136473	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	26319506	True	NA	NA	False	NA	NA	NA	26319635	26431186	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_26319889_26320699_26320816_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_153411.known	chr4	+	1998	12	FSM	ENSG00000168214.22	ENST00000348160.9	1998	12	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_1	361.44734307805	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGTTGTCTCCCTGCAAG	26315289	True	NA	NA	False	NA	NA	NA	26320806	26431136	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_26321049_26362445_26362629_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_153414.known	chr4	+	2136	12	FSM	ENSG00000168214.22	ENST00000505958.6	2136	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	436.389184858146	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTCTTTTTGCTAGGACT	26321354	False	NA	NA	False	NA	NA	NA	26321364	26431009	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_26321872_26362445_26362629_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_153416.known	chr4	+	1697	11	FSM	ENSG00000168214.22	ENST00000361572.10	1697	11	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	365.749162678467	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCGTCTTTTTGCTAGGA	26320516	False	NA	NA	False	NA	NA	NA	26320562	26431007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_26320816_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_153420.known	chr4	+	5395	11	FSM	ENSG00000168214.22	ENST00000355476.8	5395	11	0	0	0	0	multi-exon	FALSE	canonical	3	493	junction_1	274.839389462282	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTCTGTCGAATGTGCCT	26313447	True	NA	21	True	AATAAA	-29	NA	26321013	26434923	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_26321049_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_153422.known	chr4	+	2169	11	FSM	ENSG00000168214.22	ENST00000681484.1	2169	11	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_1	411.415653567046	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTTGAAATGCAGAAGCC	26321288	False	NA	NA	False	NA	NA	NA	26321298	26431159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_26321872_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_153437.nic	chr4	+	445	4	ISM	ENSG00000168214.22	ENST00000510778.7	1198	12	-212	15164	-3	-44	5prime_fragment	FALSE	canonical	3	493	junction_1	354.42096752622	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAACGCGATGGTTGTTCT	26320541	False	NA	NA	False	AAAAAG	-7	NA	26320803	26415539	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_26321049_26386352_26386392_26406174_26406271_26415474
transcript_153440.known	chr4	+	2967	21	FSM	ENSG00000109680.11	ENST00000264866.9	2967	21	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_8	4.50860288781347	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTTATAATCCTATGCT	26583617	True	NA	NA	False	AATAAA	-27	NA	26584083	26756223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_26584293_26613168_26613242_26614407_26614454_26620612_26620689_26637210_26637286_26638770_26638835_26640140_26640188_26659596_26659708_26666332_26666406_26672148_26672188_26673775_26673889_26683674_26683750_26688344_26688408_26717932_26718018_26720080_26720126_26735454_26735488_26739863_26739974_26742507_26742600_26748410_26748527_26753819_26753891_26754872
transcript_153442.known	chr4	+	1953	20	FSM	ENSG00000109680.11	ENST00000502873.5	1953	20	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_8	4.54524804365981	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCACTTGAGAGAATTAAA	26583617	True	NA	NA	False	AAGAAA	-1	NA	26584083	26754227	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_26584293_26613168_26613242_26614407_26614454_26620612_26620689_26637210_26637286_26638770_26638835_26640140_26640188_26659596_26659708_26666332_26666406_26672148_26672188_26673775_26673889_26683674_26683750_26688344_26688408_26717932_26718018_26720080_26720126_26735454_26735488_26739863_26739974_26742507_26742600_26748410_26748527_26753819
transcript_153443.known	chr4	+	1386	18	FSM	ENSG00000109680.11	ENST00000511789.5	1386	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.2522517681988	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTTCACAGTCACTGGC	26583727	False	NA	NA	False	NA	NA	NA	26584193	26754947	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_26584293_26637210_26637286_26638770_26638835_26640140_26640188_26659596_26659708_26666332_26666406_26672148_26672188_26673775_26673889_26683674_26683750_26688344_26688408_26717932_26718018_26720080_26720126_26735454_26735488_26739863_26739974_26742507_26742600_26748410_26748527_26753819_26753891_26754872
transcript_153447.known	chr4	+	3613	13	FSM	ENSG00000109689.19	ENST00000465503.6	3613	13	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_9	51.2940867287189	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATTGTGCTGATTTTTG	26859764	True	NA	18	True	AATAAA	-18	NA	26860840	27023966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_26861370_26919503_26919635_26957611_26957727_26995378_26995491_26999231_26999348_27002216_27002395_27002926_27003105_27007532_27007701_27007982_27008007_27008427_27008529_27008763_27009003_27017710_27017985_27022518
transcript_153452.known	chr4	+	5004	12	FSM	ENSG00000109689.19	ENST00000467087.7	5004	12	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_8	32.0098125451174	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAT	26859764	True	NA	NA	False	TTTAAA	-21	NA	26860840	27025381	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_26861370_26919503_26919635_26957611_26957727_26995378_26995491_26999231_26999348_27002216_27002395_27002926_27003105_27007532_27007701_27008427_27008529_27008763_27009003_27017710_27017985_27022518
transcript_153453.nic	chr4	+	1661	8	ISM	ENSG00000109689.19	ENST00000465503.6	3613	13	-168	16300	-121	5272	5prime_fragment	FALSE	canonical	3	134	junction_6	29.0158295994951	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCTGAAATGCAGCTAGCTA	26859596	True	NA	-34	True	ATTAAA	-9	NA	26860672	27007666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_26861370_26919503_26919635_26957611_26957727_26995378_26995491_26999231_26999348_27002216_27002395_27002926_27003105_27007532
transcript_153455.nic	chr4	+	828	2	ISM	ENSG00000109689.19	ENST00000465503.6	3613	13	-168	104332	-121	60715	5prime_fragment	FALSE	canonical	3	158	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGTGGAAAAATGTTTTC	26859596	True	NA	NA	False	NA	NA	NA	26860672	26919634	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_26861370_26919503
transcript_153456.known	chr4	-	346	2	FSM	ENSG00000240005.6	ENST00000667363.1	346	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTTGCCAGCATATTTTT	-26860527	True	NA	3	True	AATAAA	-29	NA	26860632	26859805	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_26860029_26860509
transcript_153457.known	chr4	-	992	2	FSM	ENSG00000248281.1	ENST00000505272.1	992	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTAATCTGCTGTAGGCC	NA	False	NA	NA	False	NA	NA	NA	30008316	30006950	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_30007051_30007424
transcript_153460.known	chr4	+	3643	4	FSM	ENSG00000154274.15	ENST00000381980.9	3643	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.94392028877595	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTCTCTATTAAGGACC	37453881	True	NA	NA	False	AATAAA	-16	NA	37453924	37593510	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_37454041_37558026_37558077_37588845_37588900_37590087
transcript_153461.known	chr4	-	3617	7	FSM	ENSG00000181826.10	ENST00000454158.7	3617	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	3.3166247903554	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTTGTCTTGTGGGTGA	-37685584	True	NA	-3	True	AATAAA	-14	NA	37686376	37610633	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_37613343_37631384_37631524_37634886_37635124_37638446_37638505_37647367_37647440_37649275_37649501_37686199
transcript_153463.known	chr4	+	3211	14	FSM	ENSG00000169299.14	ENST00000381967.9	3211	14	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_7	18.5034780034688	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTCTGCATTTTTTTT	37823471	True	NA	9	True	AAGAAA	-13	NA	37826685	37862937	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_37826814_37829963_37830132_37834617_37834725_37837528_37837614_37839847_37839932_37840065_37840260_37844363_37844554_37845632_37845731_37846930_37847112_37847201_37847296_37848521_37848652_37850183_37850374_37855607_37855742_37861509
transcript_153478.nic	chr4	+	3822	21	NIC	ENSG00000065882.17	novel	2977	17	NA	NA	54	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_11	96.6267431925551	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTGGTTCCTTTTTGAG	37972116	True	NA	16	True	AATAAA	-16	NA	37977363	38137619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_37977530_38014508_38014974_38018353_38018444_38020590_38020696_38021585_38021719_38027787_38027880_38035587_38035699_38044361_38044491_38045816_38045904_38049617_38049899_38051898_38052061_38053105_38053226_38054198_38054339_38089931_38090118_38095928_38096091_38102998_38103158_38115709_38115955_38118032_38118193_38124961_38125132_38133083_38133258_38137134
transcript_153480.known	chr4	+	5703	20	FSM	ENSG00000065882.17	ENST00000261439.9	5703	20	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_2	87.0330914237228	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATGGTGGTTTTTTTT	37890394	True	NA	10	True	AATAAA	-24	NA	37891083	38139173	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_37891349_37902002_37902513_38014508_38014974_38018353_38018444_38020590_38020696_38021585_38021719_38027787_38027880_38035587_38035699_38044361_38044491_38045816_38045904_38049617_38049899_38054198_38054339_38089931_38090118_38095928_38096091_38102998_38103158_38115709_38115955_38118032_38118193_38124961_38125132_38133083_38133258_38137134
transcript_153484.nic	chr4	+	3802	20	NIC	ENSG00000065882.17	novel	2977	17	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_11	84.0775924443995	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTGGTTCCTTTTTGAG	NA	False	NA	16	True	AATAAA	-16	NA	37977263	38137619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_37977530_38014508_38014974_38018353_38018444_38020590_38020696_38021585_38021719_38027787_38027880_38035587_38035699_38044361_38044491_38045816_38045904_38049617_38049899_38051898_38052061_38054198_38054339_38089931_38090118_38095928_38096091_38102998_38103158_38115709_38115955_38118032_38118193_38124961_38125132_38133083_38133258_38137134
transcript_153490.nnic	chr4	+	3492	19	NNC	ENSG00000065882.17	novel	2977	17	NA	NA	63	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_10	67.5348104112535	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTGGTTCCTTTTTGAG	37972125	True	NA	16	True	AATAAA	-16	NA	37977372	38137619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_+_37977530_38014508_38014974_38018353_38018444_38020590_38020696_38021585_38021719_38027787_38027880_38035587_38035699_38044361_38044491_38045816_38045904_38049617_38049860_38054198_38054339_38089931_38090118_38095928_38096091_38102998_38103158_38115709_38115955_38118032_38118193_38124961_38125132_38133083_38133258_38137134
transcript_153492.nic	chr4	+	3640	19	NIC	ENSG00000065882.17	novel	2977	17	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	3	208	junction_1	38.6342856112464	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTGGTTCCTTTTTGAG	NA	False	NA	16	True	AATAAA	-16	NA	37977263	38137619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_37977530_38014508_38014974_38018353_38018444_38020590_38020696_38021585_38021719_38027787_38027880_38035587_38035699_38044361_38044491_38045816_38045904_38049617_38049899_38054198_38054339_38089931_38090118_38095928_38096091_38102998_38103158_38115709_38115955_38118032_38118193_38124961_38125132_38133083_38133258_38137134
transcript_153505.known	chr4	+	1987	12	FSM	ENSG00000065882.17	ENST00000446803.6	1987	12	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_1	32.4821629373862	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAACAGATACTGCTGCT	37972062	True	NA	NA	False	AAGAAA	-43	NA	37977309	38090065	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_37977530_38014508_38014974_38018353_38018444_38020590_38020696_38021585_38021719_38027787_38027880_38035587_38035699_38044361_38044491_38045816_38045904_38049617_38049899_38054198_38054339_38089931
transcript_153508.known	chr4	+	1567	3	FSM	ENSG00000065882.17	ENST00000402522.1	1567	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	6.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATGTCCATCTCTTGAA	37890409	True	NA	3	True	AATAAA	-21	NA	37891098	37952812	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_37891349_37902002_37902513_37952005
transcript_153510.nic	chr4	+	777	3	ISM	ENSG00000065882.17	ENST00000446803.6	1987	12	-46	71666	-46	-2465	5prime_fragment	FALSE	canonical	3	208	junction_1	27	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCATTGGAGAAAAATTTT	NA	False	NA	NA	False	NA	NA	NA	37977263	38018399	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_37977530_38014508_38014974_38018353
transcript_153513.known	chr4	+	5594	6	FSM	ENSG00000109787.13	ENST00000261438.10	5594	6	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_4	5.86515131944607	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTTCAAGCCTTTAGT	38663174	True	NA	NA	False	ATTAAA	-25	NA	38664198	38701517	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_38664462_38680586_38680683_38688584_38689072_38689728_38689880_38694745_38694907_38697081
transcript_153516.known	chr4	+	1871	4	FSM	ENSG00000109787.13	ENST00000514033.1	1871	4	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_3	5.43650214343336	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTCCTTTATTTTCTCT	38663172	True	NA	NA	False	AATAAA	-13	NA	38664196	38690751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_38664462_38680586_38680683_38688584_38689072_38689728
transcript_153517.nic	chr4	+	801	3	ISM	ENSG00000109787.13	ENST00000514033.1	1871	4	-179	1906	-179	-1906	5prime_fragment	FALSE	canonical	3	100	junction_1	5.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCACCCCCTTCTCCAGG	38664005	True	NA	NA	False	GATAAA	-5	NA	38664017	38688845	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_38664462_38680586_38680683_38688584
transcript_153518.known	chr4	+	4060	15	FSM	ENSG00000197712.12	ENST00000358869.5	4060	15	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	13.1918728846241	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGATTGCCAGAAATGTTT	38867086	True	NA	3	True	ATTAAA	-15	NA	38867805	38945739	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_38867835_38868397_38868547_38878070_38878427_38891742_38891831_38905521_38905636_38905754_38905862_38908591_38908727_38914920_38915074_38922769_38922894_38929241_38929334_38931450_38931613_38932234_38932375_38935717_38935791_38940967_38941022_38943455
transcript_153519.nic	chr4	+	3361	14	NIC	ENSG00000197712.12	novel	4060	15	NA	NA	-125	-804	combination_of_known_junctions	FALSE	canonical	3	21	junction_11	9.71243331749287	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTGAAGAACAAGGTAAAT	38867363	True	NA	NA	False	AATAAA	-18	NA	38867551	38944935	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_38867835_38878070_38878427_38891742_38891831_38905521_38905636_38905754_38905862_38908591_38908727_38914920_38915074_38922769_38922894_38929241_38929334_38931450_38931613_38932234_38932375_38935717_38935791_38940967_38941022_38943455
transcript_153523.known	chr4	+	1431	13	FSM	ENSG00000197712.12	ENST00000515037.5	1431	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	12.4353885700805	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAGACTCCATCTAGTTA	38867031	True	NA	NA	False	NA	NA	NA	38867750	38943560	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_38867835_38891742_38891831_38905521_38905636_38905754_38905862_38908591_38908727_38914920_38915074_38922769_38922894_38929241_38929334_38931450_38931613_38932234_38932375_38935717_38935791_38940967_38941022_38943455
transcript_153525.nic	chr4	+	1538	10	NIC	ENSG00000197712.12	novel	4060	15	NA	NA	-125	2253	combination_of_known_junctions	FALSE	canonical	3	22	junction_8	10.0639927770882	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGGAAGAAAAGGAAGAGA	38867363	True	NA	-41	True	AAGAAA	-5	NA	38867551	38931536	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_38867835_38878070_38878427_38891742_38891831_38905521_38905636_38905754_38905862_38908591_38908727_38914920_38915074_38922769_38922894_38929241_38929334_38931450
transcript_153527.nic	chr4	+	1100	8	NIC	ENSG00000197712.12	novel	4060	15	NA	NA	27	-6424	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	7.47785847331566	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATTAGAGAATGAAGAAAA	38867058	True	NA	NA	False	ATTAAA	-19	NA	38867777	38922859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_38867835_38878070_38878427_38891742_38891831_38905521_38905636_38905754_38905862_38908591_38908727_38914920_38915074_38922769
transcript_153529.nic	chr4	+	1124	7	NIC	ENSG00000197712.12	novel	4060	15	NA	NA	16	-14107	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	8.05708797684788	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTATTATTGTGCTGAGG	38867047	True	NA	7	True	ATTAAA	-20	NA	38867766	38915176	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_38867835_38878070_38878427_38891742_38891831_38905521_38905636_38905754_38905862_38908591_38908727_38914920
transcript_153532.known	chr4	+	3425	12	FSM	ENSG00000109790.18	ENST00000261425.7	3425	12	0	0	0	0	multi-exon	TRUE	canonical	3	6	junction_1	46.3078095264772	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGATGTCTAAGATGCTT	39043346	False	NA	11	True	GATAAA	-20	NA	39045038	39122209	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_39045097_39062558_39063036_39075964_39076148_39081102_39081240_39081962_39082160_39086514_39086728_39096691_39096879_39103286_39103512_39107568_39107732_39113019_39113233_39115158_39115331_39121009
transcript_153536.known	chr4	+	2926	11	FSM	ENSG00000109790.18	ENST00000508137.6	2926	11	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_6	18.5677139142114	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAGATGTCTAAGATGCT	39043367	False	NA	10	True	GATAAA	-19	NA	39045059	39122208	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_39045097_39075964_39076148_39081102_39081240_39081962_39082160_39086514_39086728_39096691_39096879_39103286_39103512_39107568_39107732_39113019_39113233_39115158_39115331_39121009
transcript_153550.known	chr4	+	4395	37	FSM	ENSG00000157796.18	ENST00000399820.8	4395	37	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	11.4029723220649	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTGACGTTTTTCTGG	39181381	True	NA	13	True	AATAAA	-14	NA	39182528	39285810	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_39182564_39185725_39185818_39186538_39186605_39189655_39189782_39194543_39194660_39199477_39199594_39203641_39203723_39205153_39205267_39205562_39205737_39214600_39214672_39215840_39216014_39216095_39216211_39217133_39217241_39217982_39218106_39224883_39225034_39228209_39228358_39228485_39228691_39231796_39231957_39232161_39232273_39234765_39234876_39240276_39240335_39244247_39244389_39244469_39244553_39245368_39245453_39253145_39253293_39253905_39254031_39255847_39255961_39257485_39257555_39266062_39266141_39267994_39268092_39269975_39270101_39272979_39273062_39274807_39274959_39277019_39277144_39278130_39278208_39278538_39278664_39285486
transcript_153554.known	chr4	+	4249	36	FSM	ENSG00000157796.18	ENST00000506869.5	4249	36	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_11	12.4871852680405	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACTTTAAAATAAAATT	39181381	True	NA	-17	True	NA	NA	NA	39182528	39285780	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_39182564_39185725_39185818_39186538_39186605_39189655_39189782_39199477_39199594_39203641_39203723_39205153_39205267_39205562_39205737_39214600_39214672_39215840_39216014_39216095_39216211_39217133_39217241_39217982_39218106_39224883_39225034_39228209_39228358_39228485_39228691_39231796_39231957_39232161_39232273_39234765_39234876_39240276_39240335_39244247_39244389_39244469_39244553_39245368_39245453_39253145_39253293_39253905_39254031_39255847_39255961_39257485_39257555_39266062_39266141_39267994_39268092_39269975_39270101_39272979_39273062_39274807_39274959_39277019_39277144_39278130_39278208_39278538_39278664_39285486
transcript_153558.known	chr4	-	4870	25	FSM	ENSG00000035928.17	ENST00000349703.7	4870	25	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_12	30.4856238887921	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTGAGTCACGACCCTG	-39359558	True	NA	-7	True	AATAAA	-19	NA	39366362	39287455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_39288845_39289847_39290040_39291638_39291853_39295613_39295760_39300020_39300139_39300259_39300415_39302277_39302377_39302499_39302596_39302736_39302875_39303059_39303152_39304813_39304929_39306591_39306702_39308635_39309033_39311444_39311550_39312751_39312932_39316914_39317023_39320382_39320670_39321286_39321375_39323339_39323418_39326562_39326641_39327523_39327757_39342344_39342468_39345400_39345477_39351347_39351477_39366238
transcript_153559.known	chr4	-	4886	25	FSM	ENSG00000035928.17	ENST00000381897.5	4886	25	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_12	45.8720291196668	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTGAGTCACGACCCTG	-39359571	True	NA	-7	True	AATAAA	-19	NA	39366375	39287455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_39288845_39289847_39290040_39291638_39291853_39295613_39295760_39300020_39300139_39300259_39300415_39302277_39302377_39302499_39302596_39302736_39302875_39303059_39303152_39304813_39304929_39306591_39306705_39308635_39309033_39311444_39311550_39312751_39312932_39316914_39317023_39320382_39320670_39321286_39321375_39323339_39323418_39326562_39326641_39327523_39327757_39342344_39342468_39345400_39345477_39351347_39351477_39366238
transcript_15356.known	chr1	+	5182	4	FSM	ENSG00000132718.9	ENST00000368324.5	5182	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	17.5182444579612	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGATGTCAGCCTGATTC	155858407	True	NA	11	True	AATAAA	-24	NA	155859566	155885199	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_155859796_155867964_155868792_155880499_155880624_155881197
transcript_153569.nic	chr4	-	1674	13	ISM	ENSG00000035928.17	ENST00000381897.5	4886	25	-11	21536	-11	-2358	5prime_fragment	FALSE	canonical	3	232	junction_1	15.9450009581547	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTCCAAGGAAAAAGAAAAA	-39359582	True	NA	NA	False	AAGAAA	-33	NA	39366386	39308991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_39309033_39311444_39311550_39312751_39312932_39316914_39317023_39320382_39320670_39321286_39321375_39323339_39323418_39326562_39326641_39327523_39327757_39342344_39342468_39345400_39345477_39351347_39351477_39366238
transcript_153571.nic	chr4	-	1163	9	ISM	ENSG00000035928.17	ENST00000381897.5	4886	25	-11	33004	-11	0	5prime_fragment	FALSE	canonical	3	269	junction_1	9.75961064797157	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAATGCCATTAAA	-39359582	True	NA	NA	False	TATAAA	-26	NA	39366386	39320459	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_39320670_39321286_39321375_39323339_39323418_39326562_39326641_39327523_39327757_39342344_39342468_39345400_39345477_39351347_39351477_39366238
transcript_153573.nic	chr4	-	934	8	ISM	ENSG00000035928.17	ENST00000381897.5	4886	25	-11	33850	-11	-841	5prime_fragment	FALSE	canonical	3	272	junction_3	9.34159012815532	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAAATATCCTCATAAAGG	-39359582	True	NA	NA	False	AGTAAA	-10	NA	39366386	39321305	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_39321375_39323339_39323418_39326562_39326641_39327523_39327757_39342344_39342468_39345400_39345477_39351347_39351477_39366238
transcript_153577.nic	chr4	-	573	5	ISM	ENSG00000035928.17	ENST00000504849.5	873	6	-51	4457	-11	-52	5prime_fragment	FALSE	canonical	3	274	junction_1	10.1242283656583	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATGAAGAAAACACTAAGA	-39359582	True	NA	NA	False	NA	NA	NA	39366386	39327659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_39327757_39342344_39342468_39345400_39345477_39351347_39351477_39366238
transcript_153578.nic	chr4	-	259	2	ISM	ENSG00000035928.17	ENST00000503784.1	504	5	-37	23758	-11	-23758	5prime_fragment	FALSE	canonical	3	285	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAATAAAGGAAATCAAGGT	-39359582	True	NA	48	True	AAGAAA	-18	NA	39366386	39351365	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_39351477_39366238
transcript_153582.known	chr4	-	724	8	FSM	ENSG00000163682.17	ENST00000295955.14	724	8	0	0	0	0	multi-exon	FALSE	canonical	3	4924	junction_7	1393.20836597417	2882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGTTATCCTTTTTAGCTA	-39310806	True	NA	-17	True	AATAAA	-31	NA	39458922	39454123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_39454226_39454532_39454650_39454863_39454945_39456405_39456539_39457585_39457682_39458193_39458310_39458393_39458441_39458890
transcript_153583.known	chr4	-	2420	8	FSM	ENSG00000163682.17	ENST00000645496.2	2420	8	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_7	2869.57691541269	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTTGACCACCGTATTAA	-39310807	True	NA	-71	True	NA	NA	NA	39458923	39452586	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_39454226_39454532_39454650_39454863_39454945_39456405_39456539_39457585_39457682_39458193_39458310_39458393_39458599_39458890
transcript_153584.known	chr4	-	1127	7	FSM	ENSG00000163682.17	ENST00000449470.6	1127	7	0	0	0	0	multi-exon	FALSE	canonical	3	6213	junction_3	1013.72263629325	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCTTCTTAAACCGGTTA	-39310772	True	NA	-30	True	AATAAA	-18	NA	39458888	39454136	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_39454226_39454532_39454650_39454863_39454945_39456405_39456539_39457585_39457682_39458193_39458310_39458393
transcript_153585.known	chr4	-	772	7	FSM	ENSG00000163682.17	ENST00000503277.6	772	7	0	0	0	0	multi-exon	FALSE	canonical	3	4924	junction_6	1464.08078860272	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTAAACCGGTTATCCTT	-39310778	True	NA	-25	True	AATAAA	-23	NA	39458894	39454131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_39454226_39454532_39454650_39454863_39454945_39456405_39456539_39457585_39457682_39458193_39458441_39458890
transcript_15359.known	chr1	-	803	7	FSM	ENSG00000143622.11	ENST00000461050.5	803	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	93.3102650063516	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAACTTGAAGAGAAGATG	-155907973	True	NA	NA	False	AAGAAA	-6	NA	155911344	155900397	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155900619_155904310_155904503_155904602_155904611_155904730_155904805_155910449_155910507_155910655_155910805_155911242
transcript_153593.known	chr4	-	951	3	FSM	ENSG00000163682.17	ENST00000514842.6	951	3	0	0	0	0	multi-exon	FALSE	canonical	3	8235	junction_2	477.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCAAGGCTGGGGTCTCG	-39310785	True	NA	NA	False	NA	NA	NA	39458901	39457354	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_39457682_39458193_39458310_39458393
transcript_153596.known	chr4	+	3572	11	FSM	ENSG00000121897.15	ENST00000640888.2	3572	11	0	0	0	0	multi-exon	TRUE	canonical	3	71	junction_7	16.6279884532074	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCTCAAAAAAAAAAAAAAAA	39457731	True	NA	NA	False	NA	NA	NA	39459055	39479506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_39459163_39460789_39460963_39462195_39462290_39463524_39463606_39465045_39465203_39465284_39465343_39467517_39467647_39470018_39470165_39471235_39471307_39473099_39473212_39477062
transcript_153599.known	chr4	+	1578	10	FSM	ENSG00000121897.15	ENST00000381846.2	1578	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	35.1297418924776	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATATCTTTGTAAGAAT	39457738	True	NA	10	True	ATTAAA	-25	NA	39459062	39477648	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_39459163_39460789_39460963_39462195_39462290_39463524_39463606_39465045_39465203_39465284_39465343_39470018_39470165_39471235_39471307_39473099_39473212_39477062
transcript_153601.known	chr4	+	1011	4	FSM	ENSG00000121897.15	ENST00000424936.6	1011	4	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_3	2.35702260395516	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACAAAAAAAAAGTTTTTAA	39457733	True	NA	NA	False	NA	NA	NA	39459057	39464163	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_39459163_39460789_39460963_39462195_39462290_39463524
transcript_153613.known	chr4	-	3037	12	FSM	ENSG00000109814.12	ENST00000316423.11	3037	12	0	0	0	0	multi-exon	FALSE	canonical	3	695	junction_9	82.238315254313	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGGTGTAATTTTTGTCA	-39511205	True	NA	0	True	AATAAA	-21	NA	39527439	39498754	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_39500254_39503874_39503986_39504416_39504509_39505236_39505371_39505617_39505749_39508565_39508661_39509759_39509908_39510352_39510551_39510660_39510862_39514082_39514185_39521350_39521520_39527282
transcript_15362.known	chr1	-	3390	6	FSM	ENSG00000143622.11	ENST00000368323.8	3390	6	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_1	4.73286382647969	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGGCTTTCCTTTGCTTC	-155907978	True	NA	-1	True	AATACA	-15	NA	155911349	155897807	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155900619_155904310_155904503_155904730_155904805_155910449_155910507_155910655_155910805_155911242
transcript_153627.known	chr4	-	1712	11	FSM	ENSG00000109814.12	ENST00000507089.5	1712	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_10	254.578082324461	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGGCACCCGCCACAGT	-39511205	True	NA	NA	False	NA	NA	NA	39527439	39499910	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_39500254_39503874_39503986_39504416_39504509_39505236_39505371_39505617_39505749_39508565_39508661_39509759_39509908_39510352_39510551_39510660_39510862_39514082_39514185_39527282
transcript_153628.known	chr4	-	2826	11	FSM	ENSG00000109814.12	ENST00000501493.6	2826	11	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_8	259.795708201656	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACTATATGGGTGTAAT	-39511203	True	NA	-8	True	AATAAA	-13	NA	39527437	39498762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_39500254_39503874_39503986_39504416_39504509_39505236_39505371_39505617_39505749_39508565_39508661_39509759_39509908_39510352_39510551_39514082_39514185_39521350_39521520_39527282
transcript_153640.known	chr4	-	6252	5	FSM	ENSG00000163683.12	ENST00000295958.10	6252	5	0	0	0	0	multi-exon	FALSE	canonical	3	475	junction_1	44.7290453732248	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATACTTGTTTCTTAA	-39635789	True	NA	NA	False	AATAAA	-13	NA	39638865	39546335	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_39552159_39556427_39556571_39572414_39572464_39605070_39605181_39638738
transcript_153646.known	chr4	-	830	4	FSM	ENSG00000163683.12	ENST00000511809.5	830	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	264.940664216642	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGTTTATTTGTGGATGG	-39635817	True	NA	NA	False	AAGAAA	-32	NA	39638893	39551642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_39552159_39572414_39572464_39605070_39605181_39638738
transcript_153651.known	chr4	+	5153	7	FSM	ENSG00000078140.14	ENST00000261427.10	5153	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	326.865245764809	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTATATCTTATTTCTG	39664870	True	NA	29	True	AATAAA	-25	NA	39698135	39782792	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_39698391_39737419_39737514_39745751_39745811_39755656_39755740_39774833_39774934_39777681_39777811_39778359
transcript_153654.known	chr4	+	2262	7	FSM	ENSG00000078140.14	ENST00000438068.6	2262	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	410.814502611039	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATATTGTAATGTTAAAG	39664873	True	NA	6	True	AATAAA	-14	NA	39698138	39779992	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_39698303_39737419_39737514_39745751_39745811_39755656_39755740_39774833_39774934_39777681_39777811_39778359
transcript_153657.known	chr4	+	2175	6	FSM	ENSG00000078140.14	ENST00000445950.2	2175	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	412.519769223246	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATTATTAAATATATTGTA	39664910	True	NA	-3	True	AATAAA	-5	NA	39698175	39779983	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_39698391_39737419_39737514_39745751_39745811_39755656_39755740_39774833_39774934_39778359
transcript_153659.known	chr4	+	871	6	FSM	ENSG00000078140.14	ENST00000513231.5	871	6	0	0	0	0	multi-exon	FALSE	canonical	2	184	junction_1	280.993665409027	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAACGTCTGTGTAAATT	39664873	True	NA	-5	True	AATAAA	-5	NA	39698138	39778607	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_39698391_39745751_39745811_39755656_39755740_39774833_39774934_39777681_39777811_39778359
transcript_153663.known	chr4	+	891	5	FSM	ENSG00000078140.14	ENST00000503368.5	891	5	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_1	378.234963349503	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTAGTGTTTAGCAGTGT	39664897	True	NA	98	True	AAGAAA	-7	NA	39698162	39778710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_39698391_39755656_39755740_39774833_39774934_39777681_39777811_39778359
transcript_153667.known	chr4	-	7131	33	FSM	ENSG00000121892.15	ENST00000303538.13	7131	33	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	75.8225724965857	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTAGTGTGGAGCCCTG	-39974143	True	NA	NA	False	AATAAA	-20	NA	39977911	39822862	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_39825489_39837855_39838209_39841947_39842057_39844655_39844802_39845817_39845881_39848850_39848971_39849519_39849653_39862218_39862334_39862868_39863074_39863335_39863460_39866860_39866998_39869393_39869463_39872985_39873145_39874288_39874413_39876992_39877154_39879727_39879834_39890248_39890365_39898388_39898529_39898776_39898826_39900425_39900508_39902346_39902461_39904039_39904192_39908394_39908541_39910243_39910339_39913610_39913727_39917047_39917189_39920318_39920400_39922621_39922749_39925835_39925934_39926774_39926862_39927960_39928165_39976439_39976618_39977456
transcript_15367.nnic	chr1	-	2097	15	NNC	ENSG00000132680.11	novel	2961	14	NA	NA	-34	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	62.6861310052564	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTGTGGTTTCTCTGT	-155924834	True	NA	-9	True	AATAAA	-12	NA	155934447	155913046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_155913446_155914212_155914321_155915872_155915965_155916624_155916710_155917498_155917673_155921374_155921528_155921860_155921919_155923626_155923688_155925631_155925844_155926675_155926840_155927103_155927157_155929295_155929376_155929711_155929841_155933632_155933850_155934335
transcript_153683.known	chr4	-	2685	16	FSM	ENSG00000121892.15	ENST00000503396.5	2685	16	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_12	40.0303218406581	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTGGTTTCATTTACA	-39977196	True	NA	-1	True	AATAAA	-22	NA	39977956	39898013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_39898529_39898776_39898826_39900425_39900508_39902346_39902461_39904039_39904192_39908394_39908541_39910243_39910339_39913610_39913727_39917047_39917189_39920318_39920400_39922621_39922749_39925835_39925934_39926774_39926862_39927960_39928165_39976439_39976618_39977456
transcript_153686.nic	chr4	-	1914	13	ISM	ENSG00000121892.15	ENST00000503396.5	2685	16	64	4394	19	1634	5prime_fragment	FALSE	canonical	3	333	junction_9	32.862085549561	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGAAGAGAGAATGAAATGC	-39974124	True	NA	NA	False	NA	NA	NA	39977892	39902407	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_39902461_39904039_39904192_39908394_39908541_39910243_39910339_39913610_39913727_39917047_39917189_39920318_39920400_39922621_39922749_39925835_39925934_39926774_39926862_39927960_39928165_39976439_39976618_39977456
transcript_153691.nic	chr4	-	2019	3	NIC	ENSG00000121892.15	novel	2685	16	NA	NA	19	-16695	intron_retention	FALSE	canonical	3	366	junction_1	36	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAATAACTATTAACATT	-39974124	True	NA	NA	False	AATAGA	-34	NA	39977892	39926759	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_39928165_39976439_39976618_39977456
transcript_15370.nnic	chr1	-	2226	15	NNC	ENSG00000132680.11	novel	2961	14	NA	NA	-34	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	50.548420916413	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTGTGGTTTCTCTGT	-155924834	True	NA	-9	True	AATAAA	-12	NA	155934447	155913046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_155913446_155914212_155914321_155915872_155915965_155916624_155916738_155917498_155917673_155921374_155921629_155921860_155921919_155923626_155923688_155925631_155925844_155926675_155926840_155927103_155927157_155929295_155929376_155929711_155929841_155933632_155933850_155934335
transcript_153704.nnic	chr4	+	2771	10	NNC	ENSG00000078177.14	novel	9720	18	NA	NA	-277	17498	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	37.7303624010369	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGATATGAATCCTAGC	40056559	False	NA	NA	False	AAGAAA	-6	NA	40056572	40120104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_+_40057031_40073454_40073552_40080370_40080480_40097226_40097570_40102074_40103219_40106899_40107025_40112083_40112173_40113431_40113509_40117868_40118025_40119931
transcript_153706.nnic	chr4	+	2517	10	NNC	ENSG00000078177.14	novel	9720	18	NA	NA	-52	17498	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	32.5250141154447	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGATATGAATCCTAGC	40051097	True	NA	NA	False	AAGAAA	-6	NA	40056797	40120104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_+_40057031_40073454_40073552_40095530_40095611_40097226_40097570_40102074_40103219_40106899_40107025_40112083_40112173_40113431_40113509_40117868_40118025_40119931
transcript_15371.nic	chr1	-	2866	14	NIC	ENSG00000132680.11	novel	2961	14	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_5	50.8744829728173	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGGTTTCTCTGTTT	-155924834	True	NA	-7	True	AATAAA	-14	NA	155934447	155913044	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_155914321_155915872_155915965_155916624_155916710_155917498_155917673_155921374_155921528_155921860_155921919_155923626_155923688_155925631_155925844_155926675_155926840_155927103_155927157_155929295_155929376_155929711_155929841_155933632_155933850_155934335
transcript_153710.nic	chr4	+	2510	10	ISM	ENSG00000078177.14	ENST00000511480.5	9747	19	-97	38147	-34	17498	5prime_fragment	FALSE	canonical	3	15	junction_4	34.2507096439054	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGATATGAATCCTAGC	40051115	True	NA	NA	False	AAGAAA	-6	NA	40056815	40120104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_40057031_40073454_40073552_40097226_40097570_40100035_40100127_40102074_40103219_40106899_40107025_40112083_40112173_40113431_40113509_40117868_40118025_40119931
transcript_153720.nic	chr4	+	2662	9	ISM	ENSG00000078177.14	ENST00000261435.11	9720	18	-277	38148	-277	17498	5prime_fragment	FALSE	canonical	3	36	junction_3	23.8576507644822	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGATATGAATCCTAGC	40056559	False	NA	NA	False	AAGAAA	-6	NA	40056572	40120104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_40057031_40073454_40073552_40097226_40097570_40102074_40103219_40106899_40107025_40112083_40112173_40113431_40113509_40117868_40118025_40119931
transcript_153721.nic	chr4	+	2907	9	ISM	ENSG00000078177.14	ENST00000261435.11	9720	18	-87	37713	-87	17933	5prime_fragment	FALSE	canonical	3	36	junction_3	23.8576507644822	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCATCCGTACAAAGCGAC	40056741	False	NA	NA	False	AAAAAG	-21	NA	40056762	40120539	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_40057031_40073454_40073552_40097226_40097570_40102074_40103219_40106899_40107025_40112083_40112173_40113431_40113509_40117868_40118025_40119931
transcript_153724.nnic	chr4	+	2332	8	NIC	ENSG00000078177.14	novel	9720	18	NA	NA	-44	17498	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	35.7125713874266	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGATATGAATCCTAGC	40051105	True	NA	NA	False	AAGAAA	-6	NA	40056805	40120104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_40057031_40097226_40097570_40102074_40103219_40106899_40107025_40112083_40112173_40113431_40113509_40117868_40118025_40119931
transcript_153727.nic	chr4	+	2319	8	NIC	ENSG00000078177.14	novel	9720	18	NA	NA	-277	17498	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	29.4562976184679	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGATATGAATCCTAGC	40056559	False	NA	NA	False	AAGAAA	-6	NA	40056572	40120104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_40057031_40073454_40073552_40102074_40103219_40106899_40107025_40112083_40112173_40113431_40113509_40117868_40118025_40119931
transcript_15373.nic	chr1	-	2967	14	NIC	ENSG00000132680.11	novel	2961	14	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_3	38.4667688751253	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGGTTTCTCTGTTT	-155924834	True	NA	-7	True	AATAAA	-14	NA	155934447	155913044	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_155914321_155915872_155915965_155916624_155916710_155917498_155917673_155921374_155921629_155921860_155921919_155923626_155923688_155925631_155925844_155926675_155926840_155927103_155927157_155929295_155929376_155929711_155929841_155933632_155933850_155934335
transcript_153739.known	chr4	+	4181	3	FSM	ENSG00000168421.13	ENST00000381799.10	4181	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	8.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCGGGTAGTTCATTCTT	40196766	True	NA	NA	False	ATTAAA	-35	NA	40197030	40246967	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_40197301_40242713_40242835_40243177
transcript_15374.nic	chr1	-	2894	14	NIC	ENSG00000132680.11	novel	2961	14	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_5	44.9912549030529	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGGTTTCTCTGTTT	-155924834	True	NA	-7	True	AATAAA	-14	NA	155934447	155913044	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_155914321_155915872_155915965_155916624_155916738_155917498_155917673_155921374_155921528_155921860_155921919_155923626_155923688_155925631_155925844_155926675_155926840_155927103_155927157_155929295_155929376_155929711_155929841_155933632_155933850_155934335
transcript_153748.known	chr4	+	2272	5	FSM	ENSG00000174343.6	ENST00000310169.3	2272	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.22474487139159	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGCTCATCCATTCATT	40335245	True	NA	-82	True	ATTAAA	-17	NA	40335332	40355217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_40335532_40335826_40335973_40337209_40337365_40348881_40349415_40353978
transcript_15375.known	chr1	-	2961	14	FSM	ENSG00000132680.11	ENST00000368321.8	2961	14	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_3	29.3743437544725	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGGTTTCTCTGTTT	-155924800	True	NA	-7	True	AATAAA	-14	NA	155934413	155913044	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155914321_155915872_155915965_155916624_155916738_155917498_155917673_155921374_155921629_155921860_155921919_155923626_155923688_155925631_155925844_155926675_155926840_155927103_155927157_155929295_155929376_155929711_155929841_155933632_155933850_155934335
transcript_153751.known	chr4	-	5114	7	FSM	ENSG00000163694.15	ENST00000295971.12	5114	7	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_6	86.1503853089984	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCAAGACCTTATTTTAAA	-40629850	False	4181	-17	True	AATAAA	-17	NA	40629864	40423279	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_40426144_40432650_40432863_40436440_40436648_40437770_40438925_40466576_40466700_40544421_40544507_40629395
transcript_153753.nic	chr4	-	4830	7	NIC	ENSG00000163694.15	novel	5114	7	NA	NA	-70	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_6	137.111876461037	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	-40626512	True	NA	NA	False	AAGAAA	-43	NA	40630693	40423680	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_40426144_40432650_40432863_40436440_40436648_40437770_40438925_40466576_40466700_40544421_40544507_40630107
transcript_153754.nic	chr4	-	4547	7	NIC	ENSG00000163694.15	novel	5114	7	NA	NA	21	0	combination_of_known_junctions	FALSE	canonical	3	234	junction_6	74.9236648566763	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	-40630751	False	NA	NA	False	AAGAAA	-43	NA	40630765	40423680	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_40426144_40432650_40432863_40436440_40436648_40437770_40438925_40466576_40466700_40544421_40544507_40630462
transcript_153758.nic	chr4	-	4482	7	NIC	ENSG00000163694.15	novel	5114	7	NA	NA	21	-65	combination_of_known_junctions	FALSE	canonical	3	234	junction_6	74.9236648566763	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGAGGAAGAAAG	-40630751	False	NA	NA	False	NA	NA	NA	40630765	40423745	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_40426144_40432650_40432863_40436440_40436648_40437770_40438925_40466576_40466700_40544421_40544507_40630462
transcript_153761.nic	chr4	-	3778	7	NIC	ENSG00000163694.15	novel	5114	7	NA	NA	21	-769	combination_of_known_junctions	FALSE	canonical	3	234	junction_6	74.9236648566763	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTAATGTATTGTTGCA	-40630751	False	NA	-6	True	ATTAAA	-18	NA	40630765	40424449	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_40426144_40432650_40432863_40436440_40436648_40437770_40438925_40466576_40466700_40544421_40544507_40630462
transcript_153778.known	chr4	-	2118	2	FSM	ENSG00000163694.15	ENST00000513044.1	2118	2	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAATAAATAAAAA	-40629515	False	NA	NA	False	NA	NA	NA	40629529	40542522	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_40544507_40629395
transcript_153792.known	chr4	-	1681	7	FSM	ENSG00000163697.17	ENST00000502841.5	1681	7	0	0	0	0	multi-exon	TRUE	canonical	3	97	junction_6	46.4351399504968	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATGCATTTTGGGTGGGA	-40854841	True	NA	-28	True	AATAAA	-4	NA	40857155	40815332	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_40816260_40821870_40822051_40823643_40823760_40825886_40825971_40827131_40827220_40830462_40830578_40856984
transcript_153796.nic	chr4	-	1576	7	NIC	ENSG00000163697.17	novel	1681	7	NA	NA	5	-59	combination_of_known_junctions	FALSE	canonical	3	44	junction_6	65.7184651880023	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTTTCTTTTCCGATGG	-40854836	True	NA	-15	True	ATTAAA	-14	NA	40857150	40815391	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_40816260_40821870_40822051_40823643_40823760_40825886_40825971_40827131_40827220_40830462_40830578_40857025
transcript_15380.known	chr1	-	4499	13	FSM	ENSG00000132680.11	ENST00000368320.7	4499	13	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	29.3399613723899	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGGTTTCTCTGTTT	-155924786	True	NA	-7	True	AATAAA	-14	NA	155934399	155913044	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155915965_155916624_155916738_155917498_155917673_155921374_155921629_155921860_155921919_155923626_155923688_155925631_155925844_155926675_155926840_155927103_155927157_155929295_155929376_155929711_155929841_155933632_155933850_155934335
transcript_153805.known	chr4	-	604	5	FSM	ENSG00000163697.17	ENST00000508676.5	604	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	22.785686296445	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCGGAACAGCCCAGCCACA	-41214546	True	NA	NA	False	NA	NA	NA	41214608	41014335	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_41014399_41033235_41033305_41100638_41100751_41142986_41143143_41214404
transcript_153810.known	chr4	+	4839	12	FSM	ENSG00000179299.17	ENST00000381782.7	4839	12	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_7	55.8798888999529	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTTTTCTTCTTTGAG	40746765	True	NA	NA	False	ATTAAA	-17	NA	40749954	40811184	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_40750301_40750602_40750992_40760433_40760493_40761170_40761302_40774264_40774418_40774766_40774951_40776048_40776260_40790601_40790746_40794374_40794477_40798786_40798905_40807060_40807185_40808306
transcript_153815.known	chr4	+	3546	11	FSM	ENSG00000179299.17	ENST00000316607.5	3546	11	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_10	62.6277893590377	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATATATCTTATTATTTAA	40746735	True	NA	7	True	ATTAAA	-17	NA	40749924	40809985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_40750301_40750602_40750992_40760433_40760493_40761170_40761302_40774264_40774418_40774766_40774951_40776048_40776260_40790601_40790746_40794374_40794477_40798786_40798905_40808306
transcript_153819.nic	chr4	+	3466	11	NIC	ENSG00000179299.17	novel	4839	12	NA	NA	-20	-80	combination_of_known_junctions	FALSE	canonical	3	9	junction_7	60.5878700731425	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTATGATTATCATTTCT	40749844	False	NA	51	True	ATTAAA	-43	NA	40749904	40809905	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_40750301_40750602_40750992_40760433_40760493_40761170_40761302_40774264_40774418_40774766_40774951_40776048_40776260_40794374_40794477_40798786_40798905_40807060_40807185_40808306
transcript_153830.nic	chr4	+	1659	7	ISM	ENSG00000179299.17	ENST00000316607.5	3546	11	-20	33590	-20	-81	5prime_fragment	FALSE	canonical	3	91	junction_6	33.543090031911	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTTATCAGGCTGTCC	40749844	False	NA	NA	False	NA	NA	NA	40749904	40776395	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_40750301_40750602_40750992_40760433_40760493_40761170_40761302_40774264_40774418_40774766_40774951_40776048
transcript_153831.nic	chr4	+	1850	7	ISM	ENSG00000179299.17	ENST00000316607.5	3546	11	-20	33399	-20	110	5prime_fragment	FALSE	canonical	3	91	junction_6	33.543090031911	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGACAAAGATAATATCTAG	40749844	False	NA	NA	False	AATAAA	-44	NA	40749904	40776586	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_40750301_40750602_40750992_40760433_40760493_40761170_40761302_40774264_40774418_40774766_40774951_40776048
transcript_153834.known	chr4	+	1759	6	FSM	ENSG00000179299.17	ENST00000473399.5	1759	6	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_4	19.8131269616888	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGTAGTTTAAATTCA	40746774	True	NA	NA	False	AATAAA	-7	NA	40749963	40775456	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_40750301_40750602_40750992_40760433_40760493_40761170_40761302_40774264_40774418_40774766
transcript_153837.nic	chr4	+	1395	4	ISM	ENSG00000179299.17	ENST00000473399.5	1759	6	-59	13735	-20	-13735	5prime_fragment	FALSE	canonical	3	168	junction_3	8.60232526704263	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTACTTAAGAACAAACTA	40749844	False	NA	NA	False	AGTAAA	-11	NA	40749904	40761721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_40750301_40750602_40750992_40760433_40760493_40761170
transcript_153842.nnic	chr4	+	2033	3	NNC	ENSG00000179299.17	novel	1759	6	NA	NA	4	-21467	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	94.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCAGTCTCGGGTATAT	40746769	True	NA	23	True	ATTAAA	-18	NA	40749958	40753989	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_+_40750301_40750602_40751788_40753483
transcript_153843.nnic	chr4	+	2782	3	NNC	ENSG00000179299.17	novel	1759	6	NA	NA	-20	-20772	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	94.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGGTCCCTTTTGTTTGT	40749844	False	NA	0	True	ATTAAA	-12	NA	40749904	40754684	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_+_40750301_40750602_40751788_40753483
transcript_153844.nic	chr4	+	825	2	ISM	ENSG00000179299.17	ENST00000473399.5	1759	6	-59	24425	-20	-24425	5prime_fragment	FALSE	canonical	3	189	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAGCGAGAGAATTTGGG	40749844	False	NA	NA	False	ACTAAA	-7	NA	40749904	40751031	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_40750301_40750602
transcript_153845.nic	chr4	+	1359	2	ISM	ENSG00000179299.17	ENST00000473399.5	1759	6	-59	23891	-20	-23891	5prime_fragment	FALSE	canonical	3	189	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATATCAAAATTACACCA	40749844	False	NA	NA	False	AATAAA	-26	NA	40749904	40751565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_40750301_40750602
transcript_153847.known	chr4	+	917	10	FSM	ENSG00000154277.13	ENST00000503431.5	917	10	0	0	0	0	multi-exon	FALSE	canonical	1	51	junction_1	793.878353090807	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCATTGTGGTGTGAGC	NA	False	NA	NA	False	NA	NA	NA	41256768	41268256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_41256804_41256949_41257010_41257114_41257127_41257608_41257738_41260646_41260798_41261714_41261801_41261875_41261924_41263224_41263292_41264102_41264162_41267986
transcript_153850.known	chr4	+	748	9	FSM	ENSG00000154277.13	ENST00000505232.5	748	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_6	840.675165789379	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCTTCAACATGAAAATAT	41211747	True	NA	NA	False	NA	NA	NA	41256931	41268108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_41257010_41257114_41257127_41257608_41257738_41260646_41260798_41261714_41261801_41261875_41261924_41263228_41263292_41264102_41264162_41267986
transcript_153853.known	chr4	+	827	8	FSM	ENSG00000154277.13	ENST00000508768.5	827	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	882.142267206281	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCACAGCTGTCCACTGG	41256847	True	NA	NA	False	NA	NA	NA	41256939	41268239	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_41257010_41257114_41257127_41257608_41257738_41260646_41260798_41261714_41261801_41263224_41263292_41264102_41264162_41267986
transcript_153855.known	chr4	+	1550	8	FSM	ENSG00000154277.13	ENST00000472501.5	1550	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	903.930623127998	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCACAGCTGATTCTCAT	41256853	False	NA	27	True	AATAAA	-19	NA	41256945	41268427	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_41257021_41257114_41257738_41260646_41260798_41261714_41261801_41261875_41261924_41263224_41263292_41264102_41264162_41267986
transcript_153857.known	chr4	+	1119	8	FSM	ENSG00000154277.13	ENST00000512419.5	1119	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	903.930623127998	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTCTCCTCAATATGTCA	41256559	False	NA	55	True	NA	NA	NA	41256910	41268455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_41257021_41257608_41257738_41260646_41260798_41261714_41261801_41261875_41261924_41263224_41263292_41264102_41264162_41267986
transcript_153863.known	chr4	+	785	9	FSM	ENSG00000154277.13	ENST00000512788.1	785	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	837.93748834564	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATACCCCCCCATGCAGT	41256852	False	NA	NA	False	NA	NA	NA	41256944	41268125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_41257010_41257114_41257127_41257608_41257738_41260646_41260798_41261714_41261801_41261875_41261924_41263224_41263292_41264102_41264191_41267986
transcript_153864.known	chr4	+	862	6	FSM	ENSG00000154277.13	ENST00000514764.5	862	6	0	0	0	0	multi-exon	FALSE	canonical	3	2464	junction_4	65.5908530208291	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGCTGATTCTCATTT	41260619	False	NA	29	True	AATAAA	-21	NA	41260638	41268429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_41260798_41261714_41261801_41261875_41261924_41263224_41263292_41264102_41264162_41267986
transcript_153867.known	chr4	+	1092	8	FSM	ENSG00000109133.13	ENST00000513702.5	1092	8	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	88.3862118714203	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGTGTTGCTAATGGTTA	NA	False	NA	57	True	AAAAAG	-20	NA	41935128	41954395	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_41935263_41935466_41935530_41938601_41938697_41939195_41939384_41943746_41943815_41944792_41944927_41949301_41949386_41954069
transcript_153871.known	chr4	+	867	8	FSM	ENSG00000109133.13	ENST00000508448.5	867	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	112.201895287568	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCCACTGTTTGTGAGA	NA	False	NA	NA	False	AATGAA	-38	NA	41935128	41954122	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_41935311_41935466_41935530_41938601_41938697_41939195_41939384_41943746_41943815_41944792_41944927_41949301_41949386_41954069
transcript_153876.known	chr4	+	7404	7	FSM	ENSG00000109133.13	ENST00000504986.6	7404	7	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_6	25.1440295541948	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTTGATTCTGTACT	41935393	False	NA	19	True	AAAAAG	-29	NA	41935428	41960803	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_41935530_41938601_41938697_41939195_41939384_41943746_41943815_41944792_41944927_41949301_41949386_41954069
transcript_153881.known	chr4	+	6164	18	FSM	ENSG00000014824.14	ENST00000264451.12	6164	18	0	0	0	0	multi-exon	FALSE	canonical	3	465	junction_17	58.8896686999067	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTAGTTTGGGATTTTT	41975787	True	NA	NA	False	AATAAA	-27	NA	41990529	42090461	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_41990761_42001615_42001781_42018110_42018171_42020415_42020516_42022837_42022931_42023301_42023385_42035274_42035334_42038985_42039054_42049376_42049480_42060190_42060247_42062985_42063122_42065309_42065350_42066549_42066622_42067084_42067193_42070525_42070692_42075656_42075787_42078211_42078326_42086081
transcript_153883.nic	chr4	+	2427	17	ISM	ENSG00000014824.14	ENST00000264451.12	6164	18	-59	11552	-31	58	5prime_fragment	FALSE	canonical	3	556	junction_9	49.0735656311012	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATTTGTTGAAGGCAGT	NA	False	NA	23	True	AATAAA	-25	NA	41990470	42078909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_41990761_42001615_42001781_42018110_42018171_42020415_42020516_42022837_42022931_42023301_42023385_42035274_42035334_42038985_42039054_42049376_42049480_42060190_42060247_42062985_42063122_42065309_42065350_42066549_42066622_42067084_42067193_42070525_42070692_42075656_42075787_42078211
transcript_153885.nic	chr4	+	791	6	ISM	ENSG00000014824.14	ENST00000264451.12	6164	18	-59	67077	-31	2609	5prime_fragment	FALSE	canonical	3	566	junction_5	57.5339899537656	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTATATTCAATTTAAA	NA	False	NA	NA	False	AATACA	-7	NA	41990470	42023384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_41990761_42001615_42001781_42018110_42018171_42020415_42020516_42022837_42022931_42023301
transcript_153888.known	chr4	-	8692	6	FSM	ENSG00000188848.17	ENST00000504360.5	8692	6	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_5	36.6856920338161	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTTTAACTTGGTTTT	NA	False	NA	-16	True	AATAAA	-16	NA	42152878	42110939	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_42117736_42120124_42120295_42125582_42125675_42143427_42143995_42151656_42152377_42152531
transcript_153904.known	chr4	+	2322	2	FSM	ENSG00000178343.5	ENST00000319234.5	2322	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATTTTAATGTGATTC	42397361	True	NA	13	True	AATAAA	-30	NA	42397487	42402487	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_42398334_42401011
transcript_153905.known	chr4	-	8209	36	FSM	ENSG00000124406.16	ENST00000264449.14	8209	36	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_30	8.17032959642913	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGTTGAAGTTTTGAT	-42655764	True	NA	-4	True	AATAAA	-15	NA	42657093	42408376	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_42413014_42414626_42414719_42422806_42422900_42423616_42423706_42443564_42443673_42444577_42444635_42446582_42446645_42451980_42452060_42455296_42455420_42455524_42455600_42464689_42464801_42464892_42465077_42485495_42485669_42503449_42503515_42507015_42507155_42522159_42522300_42524762_42524848_42543916_42543987_42549012_42549063_42551197_42551281_42552504_42552611_42555967_42556041_42574618_42574708_42575621_42575700_42578259_42578388_42579812_42579979_42581620_42581733_42586348_42586477_42588259_42588330_42594288_42594363_42600477_42600519_42616032_42616079_42624535_42624635_42625613_42625714_42626994_42627110_42656824
transcript_153907.known	chr4	-	2238	2	FSM	ENSG00000124406.16	ENST00000510289.1	2238	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAATTTAAAACTCTC	-42655764	True	NA	NA	False	AATAAA	-29	NA	42657093	42625140	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_42627110_42656824
transcript_153908.known	chr4	+	4460	17	FSM	ENSG00000151806.14	ENST00000281543.6	4460	17	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	36.3201368905735	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTCTATCACTGCCAA	44671394	True	NA	NA	False	ATTAAA	-15	NA	44678419	44700928	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_44678788_44680440_44680553_44680693_44680843_44681122_44681204_44682333_44682412_44683234_44683319_44685958_44686024_44686509_44686714_44688006_44688147_44689285_44689410_44689842_44689976_44690716_44690861_44691665_44691800_44694411_44694514_44695614_44695735_44697407_44697445_44698543
transcript_153913.known	chr4	+	3970	16	FSM	ENSG00000151806.14	ENST00000506793.5	3970	16	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	69.7590774658674	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCATGTGTAGAAGTAG	44671401	True	NA	93	True	TATAAA	-19	NA	44678426	44700759	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_44678586_44680693_44680843_44681122_44681204_44682333_44682412_44683234_44683319_44685958_44686024_44686509_44686714_44688006_44688147_44689285_44689410_44689842_44689976_44690716_44690861_44691665_44691800_44694411_44694514_44695614_44695735_44697407_44697445_44698543
transcript_153919.nnic	chr4	+	3987	15	NIC	ENSG00000151806.14	novel	4460	17	NA	NA	-28	0	combination_of_known_splicesites	FALSE	canonical	3	42	junction_7	78.9119892083347	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAGAGCTGTCTCAGAT	NA	False	NA	13	True	AATAAA	-13	NA	44678391	44700679	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_44678788_44680693_44680843_44681122_44681204_44682333_44682412_44683234_44683319_44685958_44686024_44686509_44686714_44689285_44689410_44689842_44689976_44690716_44690861_44691665_44691800_44694411_44694514_44695614_44695735_44697407_44697445_44698543
transcript_153921.nic	chr4	+	1556	11	ISM	ENSG00000151806.14	ENST00000281543.6	4460	17	-17	10952	-17	567	5prime_fragment	FALSE	canonical	3	194	junction_1	41.6414457001675	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGTATTTAGTACTGG	44671377	True	NA	NA	False	TATAAA	-32	NA	44678402	44689976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_44678788_44680440_44680553_44680693_44680843_44681122_44681204_44682333_44682412_44683234_44683319_44685958_44686024_44686509_44686714_44688006_44688147_44689285_44689410_44689842
transcript_153925.known	chr4	-	2235	7	FSM	ENSG00000163281.12	ENST00000295448.8	2235	7	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_5	8.02080627701064	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCCTTATAAATGTTTTT	-44725566	True	NA	NA	False	NA	NA	NA	44726556	44701794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_44703143_44707751_44707927_44710952_44711138_44717112_44717296_44718308_44718411_44722083_44722243_44726473
transcript_153928.known	chr4	-	1050	6	FSM	ENSG00000163281.12	ENST00000507534.5	1050	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	19.6102014268084	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGAGTGTCCACATCAGG	-44725533	True	NA	NA	False	TATAAA	-42	NA	44726523	44702787	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_44703143_44707751_44707927_44710952_44711138_44717112_44717296_44718308_44718411_44726473
transcript_153930.known	chr4	-	5382	6	FSM	ENSG00000163281.12	ENST00000509756.1	5382	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	8.28009661779378	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGGCTTACTGTGTCTT	-44725555	True	NA	NA	False	AATAAA	-25	NA	44726545	44703245	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_44707927_44710952_44711138_44717112_44717296_44718308_44718411_44722083_44722243_44726473
transcript_153932.known	chr4	-	11147	9	FSM	ENSG00000109158.11	ENST00000264318.4	11147	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.99608992783391	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTTGGTTTGTGTATT	NA	False	NA	NA	False	AATAAA	-18	NA	46993581	46918899	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_46928756_46964969_46965230_46971082_46971236_46974231_46974376_46977060_46977144_46977409_46977631_46979030_46979099_46992827_46992947_46993338
transcript_153933.known	chr4	-	1461	5	FSM	ENSG00000169019.11	ENST00000381571.6	1461	5	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_3	8.16624148553054	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTTGTTTTATTTTTAT	-47462599	True	NA	72	True	AATGAA	-3	NA	47463702	47450786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_47451666_47453058_47453215_47456576_47456730_47460143_47460300_47463585
transcript_153937.known	chr4	+	6668	23	FSM	ENSG00000145246.14	ENST00000273859.8	6668	23	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	4.92337987783673	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAAGAGGTTGGGATCTG	47484722	True	NA	NA	False	TTTAAA	-43	NA	47485274	47593486	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_47485520_47512503_47512831_47515475_47515671_47523011_47523217_47525556_47525643_47535508_47535616_47535901_47536034_47536436_47536565_47536685_47536939_47546623_47546863_47554725_47554915_47557663_47558274_47558922_47559030_47560948_47561076_47563580_47563766_47568836_47569147_47572153_47572231_47572871_47572998_47576772_47576974_47580397_47580479_47581959_47582065_47587018_47587207_47591041
transcript_153938.known	chr4	+	566	2	FSM	ENSG00000145246.14	ENST00000507889.1	566	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAAACCTTAGAATATC	47484744	True	NA	NA	False	AAGAAA	-38	NA	47485296	47512846	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_47485520_47512503
transcript_153939.known	chr4	+	5302	6	FSM	ENSG00000163293.12	ENST00000295461.10	5302	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	2.41660919471891	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGAGTTCAGTTTTTAG	48016249	True	NA	8	True	AATAAA	-17	NA	48016771	48040173	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_48016886_48025067_48025335_48030119_48030177_48032992_48033084_48034880_48035042_48035561
transcript_153941.known	chr4	+	708	6	FSM	ENSG00000163293.12	ENST00000508180.1	708	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	9.45304183847718	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGTGGCTCCCAAGAAAG	48016249	True	NA	NA	False	NA	NA	NA	48016771	48035613	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_48016852_48025067_48025335_48030119_48030177_48032992_48033084_48034880_48035042_48035561
transcript_153944.known	chr4	-	3880	23	FSM	ENSG00000170448.12	ENST00000507489.2	3880	23	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_22	26.6614836560871	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTAATCTAGAATATTTA	-47911084	True	NA	0	True	ATTAAA	-16	NA	47914583	47847239	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_47848337_47851094_47851149_47851855_47851943_47855058_47855164_47862845_47862916_47875126_47875294_47878524_47878666_47879095_47879118_47884345_47884438_47885497_47885658_47885878_47886000_47890612_47890704_47894179_47894303_47896522_47896648_47897966_47898082_47898756_47898858_47898958_47899121_47899369_47899549_47903192_47903324_47905236_47905347_47910823_47910995_47913968_47914206_47914364
transcript_153945.known	chr4	-	2664	23	FSM	ENSG00000170448.12	ENST00000507131.5	2664	23	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_22	16.6921568161084	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCGTCGGAAGAAGAACAG	-47911117	True	NA	NA	False	AAAACA	-9	NA	47914616	47848303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_47848337_47851094_47851149_47851855_47851943_47855058_47855164_47862845_47862916_47875126_47875294_47878524_47878666_47879095_47879118_47884345_47884438_47885497_47885658_47885878_47886000_47890612_47890704_47894179_47894303_47896522_47896648_47897966_47898082_47898756_47898858_47898958_47899121_47899369_47899549_47903192_47903324_47905236_47905347_47910823_47910995_47913968_47914206_47914549
transcript_153946.known	chr4	-	3723	23	FSM	ENSG00000170448.12	ENST00000329043.7	3723	23	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_22	27.0246291096177	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAGAATATTTATTATTAG	-47914657	False	NA	7	True	ATTAAA	-23	NA	47914667	47847232	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_47848337_47851094_47851149_47851855_47851943_47855058_47855164_47862845_47862916_47875126_47875294_47878524_47878666_47879095_47879118_47884345_47884438_47885497_47885658_47885878_47886000_47890612_47890704_47894179_47894303_47896522_47896648_47897966_47898082_47898756_47898858_47898958_47899121_47899369_47899549_47903192_47903324_47905236_47905347_47910823_47910995_47913968_47914206_47914612
transcript_153951.nic	chr4	-	2666	22	ISM	ENSG00000170448.12	ENST00000507131.5	2664	23	-23	2779	-3	0	5prime_fragment	FALSE	canonical	3	71	junction_21	14.7095847013492	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCCAGATTTATGTCTC	-47911140	True	NA	NA	False	AAGAAA	-27	NA	47914639	47851082	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_47851149_47851855_47851943_47855058_47855164_47862845_47862916_47875126_47875294_47878524_47878666_47879095_47879118_47884345_47884438_47885497_47885658_47885878_47886000_47890612_47890704_47894179_47894303_47896522_47896648_47897966_47898082_47898756_47898858_47898958_47899121_47899369_47899549_47903192_47903324_47905236_47905347_47910823_47910995_47913968_47914206_47914549
transcript_153954.nic	chr4	-	2512	20	ISM	ENSG00000170448.12	ENST00000507131.5	2664	23	-23	6756	-3	-3977	5prime_fragment	FALSE	canonical	3	71	junction_19	14.8691429726929	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAATATTTTAAGTTATT	-47911140	True	NA	NA	False	AATAAA	-4	NA	47914639	47855059	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_47855164_47862845_47862916_47875126_47875294_47878524_47878666_47879095_47879118_47884345_47884438_47885497_47885658_47885878_47886000_47890612_47890704_47894179_47894303_47896522_47896648_47897966_47898082_47898756_47898858_47898958_47899121_47899369_47899549_47903192_47903324_47905236_47905347_47910823_47910995_47913968_47914206_47914549
transcript_153957.nic	chr4	-	449	3	ISM	ENSG00000170448.12	ENST00000507131.5	2664	23	-23	62569	-3	-59790	5prime_fragment	FALSE	canonical	3	71	junction_2	12.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGGGAAAAATACTTGCAAA	-47911140	True	NA	-17	True	NA	NA	NA	47914639	47910872	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_47910995_47913968_47914206_47914549
transcript_153960.known	chr4	-	4218	1	FSM	ENSG00000259959.1	ENST00000563286.1	4218	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGTTTCTTTTTGTAAA	-47844325	False	NA	-7	True	AATAAA	-16	NA	47844339	47840121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_47840100_47844300
transcript_153961.known	chr4	-	3661	18	FSM	ENSG00000135605.13	ENST00000381501.8	3661	18	0	0	0	0	multi-exon	TRUE	canonical	3	73	junction_2	12.9090510346778	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAATCTGCCACATTCCT	-48268889	True	NA	-4	True	AGTAAA	-20	NA	48269838	48135782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_48137500_48138664_48138823_48138903_48139023_48141354_48141420_48145078_48145296_48145407_48145580_48146324_48146400_48149556_48149691_48150862_48150943_48156679_48156735_48163701_48163768_48167777_48167954_48168585_48168627_48170247_48170377_48171367_48171450_48176081_48176187_48228476_48228660_48269751
transcript_153969.known	chr4	+	6081	8	FSM	ENSG00000109171.15	ENST00000264313.11	6081	8	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_4	15.4153382402471	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGACATGAGTTTGCTTT	48338984	True	NA	7	True	AATAAA	-18	NA	48341528	48426201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_48342129_48369848_48369998_48377895_48378061_48379689_48379849_48382567_48382928_48383646_48383785_48420124_48420444_48422010
transcript_153975.nic	chr4	+	1547	5	ISM	ENSG00000109171.15	ENST00000264313.11	6081	8	-128	43288	-128	3189	5prime_fragment	FALSE	canonical	3	149	junction_4	19.2142525225417	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTTAAAAATGAAGGTAAAA	48341385	True	NA	7	True	NA	NA	NA	48341400	48382913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_48342129_48369848_48369998_48377895_48378061_48379689_48379849_48382567
transcript_153977.nic	chr4	+	825	2	ISM	ENSG00000109171.15	ENST00000264313.11	6081	8	-200	56328	-200	-9851	5prime_fragment	FALSE	canonical	3	203	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTACACCAATGCAGAAATC	NA	False	NA	NA	False	AAGAAA	-4	NA	48341328	48369873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_48342129_48369848
transcript_153978.known	chr4	+	2120	3	FSM	ENSG00000145248.7	ENST00000273861.5	2120	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	1	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCCATGTTCTTTTCGAC	48483100	True	NA	NA	False	AATGAA	-23	NA	48483342	48489526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_48484152_48484931_48485143_48488426
transcript_153980.known	chr4	+	1460	4	FSM	ENSG00000182223.7	ENST00000327939.4	1460	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0.942809041582063	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATACATTGCATAAAATC	48490239	True	NA	NA	False	AATAAA	-16	NA	48490251	48494389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_48491255_48492765_48492859_48492937_48493013_48494100
transcript_153989.known	chr4	-	441	3	FSM	ENSG00000075539.15	ENST00000502520.5	441	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	13	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCATCATGTCAAACATTA	NA	False	NA	NA	False	AATAAA	-45	NA	48780322	48634417	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_48634491_48684672_48684796_48780077
transcript_153995.nic	chr4	+	1285	9	NIC	ENSG00000109180.15	novel	1204	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	305.382444649328	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTCATCTTCCTTGATT	48830976	False	NA	16	True	AATAAA	-20	NA	48830997	48861249	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_48831053_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48851976_48857212_48857366_48860724
transcript_153998.known	chr4	+	1958	9	FSM	ENSG00000109180.15	ENST00000264312.12	1958	9	0	0	0	0	multi-exon	FALSE	canonical	3	739	junction_1	96.623544620346	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGACTGATATTATGTTA	48816422	True	NA	NA	False	AATAAA	-17	NA	48831087	48861815	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_48831250_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48851976_48857212_48857366_48860724
transcript_154008.known	chr4	+	1756	8	FSM	ENSG00000109180.15	ENST00000444354.6	1756	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	313.031588677891	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAAAACAATAAAAATTTGG	48816442	True	NA	NA	False	AGTAAA	-44	NA	48831107	48861786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_48831250_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48851976_48860724
transcript_154017.known	chr4	+	496	5	FSM	ENSG00000109180.15	ENST00000507546.5	496	5	0	0	0	0	multi-exon	FALSE	canonical	3	739	junction_1	112.219372213535	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGAACAATTAATTTAAAAT	48830928	True	NA	NA	False	NA	NA	NA	48831222	48848669	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_48831250_48832619_48832683_48833400_48833482_48842635_48842690_48848398
transcript_154019.known	chr4	+	1288	9	FSM	ENSG00000109180.15	ENST00000513391.2	1288	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	307.305222864825	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCATCTTCCTTGATTT	48830790	True	NA	17	True	AATAAA	-21	NA	48831341	48861250	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_48831399_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48851976_48857212_48857366_48860724
transcript_154020.known	chr4	+	432	6	FSM	ENSG00000109180.15	ENST00000509963.5	432	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	365.972348682247	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCCAAGAGAAATTCAAGAA	48816452	True	NA	NA	False	NA	NA	NA	48831117	48849996	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_48831254_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946
transcript_154021.known	chr4	+	1594	9	FSM	ENSG00000109180.15	ENST00000381473.7	1594	9	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	267.11596264544	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTATCTTAATGTTTAT	48816418	True	NA	28	True	ATTAAA	-25	NA	48831083	48861200	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_48831497_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48851976_48857212_48857366_48860724
transcript_154024.known	chr4	-	1109	7	FSM	ENSG00000145247.12	ENST00000508632.6	1109	7	0	0	0	0	multi-exon	FALSE	canonical	3	2676	junction_5	150.218729413701	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAGACTCCATCACACACA	-48881314	True	NA	NA	False	NA	NA	NA	48906774	48885018	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_48885566_48892771_48892890_48894005_48894054_48897803_48897858_48899828_48899926_48904483_48904612_48906657
transcript_154026.known	chr4	-	812	6	FSM	ENSG00000145247.12	ENST00000508069.6	812	6	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_4	1036.43261237767	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTCTGTCACTCACT	-48906921	False	NA	NA	False	AATAAA	-22	NA	48906937	48885381	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_48885566_48892771_48892890_48894005_48894054_48897803_48897858_48904483_48904612_48906657
transcript_154030.known	chr4	-	636	6	FSM	ENSG00000145247.12	ENST00000273860.8	636	6	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_1	1093.20563481899	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAACATTGTGTCTGTCA	-48881328	True	NA	NA	False	AATAAA	-16	NA	48906788	48885387	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_48885566_48894005_48894054_48897803_48897858_48899828_48899926_48904483_48904612_48906657
transcript_154039.known	chr4	-	459	4	FSM	ENSG00000145247.12	ENST00000506226.6	459	4	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_2	1387.74789577294	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTCTAATGGAACAAAAACA	-48881314	True	NA	NA	False	AATAAA	-4	NA	48906774	48885399	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_48885566_48894005_48894054_48904483_48904612_48906657
transcript_154043.known	chr4	+	1584	12	FSM	ENSG00000109184.15	ENST00000507741.5	1584	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	107.334496853882	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTAACCTTACTGTTTA	51840174	True	NA	NA	False	AAAACA	-33	NA	51843152	51914036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_51843268_51848204_51848368_51863436_51863508_51863669_51863710_51874270_51874386_51877762_51877855_51886567_51886639_51891759_51891852_51899269_51899379_51911069_51911175_51913289_51913393_51913528
transcript_154045.known	chr4	+	4222	11	FSM	ENSG00000109184.15	ENST00000334635.10	4222	11	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_8	47.7246267664819	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATGTGTAAATTTTTTCT	51840174	True	NA	11	True	AATAAA	-25	NA	51843152	51916837	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_51843268_51863436_51863508_51863669_51863710_51874270_51874386_51877762_51877855_51886567_51886639_51891759_51891852_51899269_51899379_51911069_51911175_51913289_51913393_51913528
transcript_154050.known	chr4	+	4207	10	FSM	ENSG00000109184.15	ENST00000381441.7	4207	10	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_8	65.0585681055971	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATGTGTAAATTTTTTCT	51843036	False	NA	11	True	AATAAA	-25	NA	51843062	51916837	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_51843268_51863436_51863508_51863669_51863710_51874270_51874386_51877762_51877855_51886567_51886639_51891759_51891852_51899269_51899379_51913289_51913393_51913528
transcript_154055.known	chr4	+	643	5	FSM	ENSG00000109184.15	ENST00000511675.5	643	5	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_1	28.8877136513086	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGTTAGAGGGAGAGAGG	51843034	False	NA	NA	False	TTTAAA	-41	NA	51843060	51877972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_51843268_51863436_51863508_51863669_51863710_51874270_51874386_51877762
transcript_154057.known	chr4	+	4269	11	FSM	ENSG00000109184.15	ENST00000451288.6	4269	11	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	91.5567583524013	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGATGTGTAAATTTTTT	51843473	False	NA	9	True	AATAAA	-23	NA	51843578	51916835	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_51843743_51863436_51863508_51863669_51863710_51874270_51874386_51877762_51877855_51886567_51886639_51891759_51891852_51899269_51899379_51911069_51911175_51913289_51913393_51913528
transcript_15406.known	chr1	-	911	6	FSM	ENSG00000132680.11	ENST00000466713.1	911	6	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	15.7607106438764	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACCCCAGCTACTTGGGA	-155924785	True	NA	NA	False	NA	NA	NA	155934398	155926470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155926840_155927103_155927157_155929295_155929376_155929711_155929841_155933632_155933850_155934335
transcript_154066.known	chr4	-	4248	6	FSM	ENSG00000163069.13	ENST00000381431.10	4248	6	0	0	0	0	multi-exon	FALSE	canonical	3	511	junction_4	65.6493716649291	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTGTTAATTTTTTAAG	-52032500	True	NA	-16	True	AATAAA	-15	NA	52038299	52020705	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_52024161_52027967_52028100_52028729_52028922_52029677_52029864_52033430_52033641_52038226
transcript_154077.known	chr4	+	4430	13	FSM	ENSG00000163071.11	ENST00000295213.9	4430	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	4.93006648591635	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCAATGATGTCCTTTACC	52051042	True	NA	12	True	AATAAA	-24	NA	52051303	52097299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_52051792_52060418_52060525_52060781_52060898_52062219_52062333_52069820_52069917_52071916_52072157_52076778_52077041_52078734_52078894_52079743_52079920_52082386_52082511_52084915_52085000_52094526_52094573_52094879
transcript_15408.nic	chr1	-	1369	5	NIC	ENSG00000132680.11	novel	911	6	NA	NA	-34	145	intron_retention	FALSE	canonical	3	181	junction_4	5.40832691319598	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGCCAAGTAATACATACAA	-155924834	True	NA	NA	False	NA	NA	NA	155934447	155926325	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_155927157_155929295_155929376_155929711_155929841_155933632_155933850_155934335
transcript_154081.known	chr4	+	2816	12	FSM	ENSG00000163071.11	ENST00000419395.6	2816	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	4.56902977204693	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGAATGTTGCTTTCTTGC	52051154	False	NA	NA	False	NA	NA	NA	52051415	52095893	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_52051792_52060418_52060525_52060781_52060898_52062219_52062333_52071916_52072157_52076778_52077041_52078734_52078894_52079743_52079920_52082386_52082511_52084915_52085000_52094526_52094573_52094879
transcript_154086.known	chr4	-	7932	9	FSM	ENSG00000109189.13	ENST00000441222.8	7932	9	0	0	0	0	multi-exon	TRUE	canonical	3	141	junction_1	18.5434456075455	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTCAGTATATTGTTCT	-52655577	True	NA	3	True	AATAAA	-27	NA	52659301	52590959	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_52597742_52598627_52598707_52601856_52602055_52604500_52604585_52610540_52610618_52626017_52626248_52627949_52628164_52631063_52631145_52659114
transcript_154089.nic	chr4	-	713	4	ISM	ENSG00000109189.13	ENST00000441222.8	7932	9	-111	35168	-111	0	5prime_fragment	FALSE	canonical	3	151	junction_2	5.43650214343336	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGCAACATGAACGAACCT	-52659401	False	NA	NA	False	ATTAAA	-3	NA	52659412	52626127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_52626248_52627949_52628164_52631063_52631145_52659114
transcript_154091.known	chr4	-	2744	4	FSM	ENSG00000226887.8	ENST00000440542.1	2744	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	34.0293990543471	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCAAGCCCCCAAACACT	-52750000	False	NA	-13	True	AATAAA	-24	NA	52751399	52743516	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_52745944_52750709_52750830_52750929_52751070_52751342
transcript_154094.known	chr4	+	987	3	FSM	ENSG00000226950.8	ENST00000411630.7	987	3	0	0	0	0	multi-exon	FALSE	canonical	3	1745	junction_1	713.5	1102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTCTCTTGTCTTTTCTCT	NA	False	NA	31	True	AATAAA	-19	NA	52712324	52714141	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_52712528_52712823_52712960_52713493
transcript_154096.known	chr4	-	3614	3	FSM	ENSG00000226887.8	ENST00000443173.6	3614	3	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	2	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTGAAAGTGATTCACAT	-52750026	False	1399	-22	True	AATAAA	-18	NA	52751425	52742552	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_52745944_52750929_52751070_52751342
transcript_154100.known	chr4	+	6065	2	FSM	ENSG00000226950.8	ENST00000441504.2	6065	2	0	0	0	0	multi-exon	FALSE	canonical	3	1745	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTGACTGGACCATGAT	52692817	True	NA	NA	False	ATTAAA	-18	NA	52712404	52718765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_52712528_52712823
transcript_154102.known	chr4	+	122	1	FSM	ENSG00000212588.1	ENST00000391286.1	122	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCAGAAAAAGTTTCGTT	52712979	False	NA	2	True	NA	NA	NA	52713248	52713370	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_52713200_52713400
transcript_154103.known	chr4	+	1059	2	FSM	ENSG00000226950.8	ENST00000425653.2	1059	2	0	0	0	0	multi-exon	FALSE	canonical	3	3172	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGGTCTCTTGTCTTTTC	52692958	True	NA	28	True	AATAAA	-16	NA	52712545	52714138	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_52712960_52713493
transcript_154104.nnic	chr4	+	1918	5	NNC	ENSG00000128045.7	novel	1968	4	NA	NA	-64	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	127.041331856998	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGATGTCTAACTTCGT	NA	False	NA	27	True	AATAAA	-15	NA	52862252	52866833	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_+_52862650_52863267_52863325_52864477_52864555_52865334_52865570_52865681
transcript_154105.known	chr4	+	1968	4	FSM	ENSG00000128045.7	ENST00000248706.5	1968	4	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_3	2.86744175568088	1153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATGTCTAACTTCGTCT	52860424	True	NA	29	True	AATAAA	-17	NA	52862316	52866835	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_52862650_52863267_52863325_52864477_52864555_52865334
transcript_154108.known	chr4	+	661	2	FSM	ENSG00000128045.7	ENST00000515677.1	661	2	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCTCTCCCTTCAAAACA	52860439	True	NA	NA	False	NA	NA	NA	52862331	52863610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_52862650_52863267
transcript_154109.known	chr4	-	3162	9	FSM	ENSG00000184178.17	ENST00000401642.8	3162	9	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_8	7.88095013307406	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTTTATTGTGGATTACA	-53364786	True	NA	NA	False	AATAAA	-17	NA	53366061	52872981	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_52874062_52885746_52885867_52907456_52907592_52920724_52920871_53145332_53145583_53273825_53274002_53313635_53313764_53352597_53352767_53365103
transcript_154112.known	chr4	-	2221	8	FSM	ENSG00000184178.17	ENST00000388940.8	2221	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	22.4926291781761	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGTT	-53364786	True	NA	NA	False	NA	NA	NA	53366061	52873787	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_52874062_52885746_52885867_52920724_52920871_53145332_53145583_53273825_53274002_53313635_53313764_53352597_53352767_53365103
transcript_154114.known	chr4	-	3978	11	FSM	ENSG00000072201.14	ENST00000263925.8	3978	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_10	6.38435587980495	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGGAAAAAAAAAAAAAAAAA	-53591216	True	NA	NA	False	NA	NA	NA	53591486	53459300	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_53461043_53461434_53461594_53476752_53476982_53478564_53478743_53481719_53481855_53496022_53496395_53498640_53498844_53507316_53507470_53507985_53508228_53573622_53574089_53591387
transcript_154118.known	chr4	+	2180	18	FSM	ENSG00000145216.16	ENST00000358575.9	2180	18	0	0	0	0	multi-exon	TRUE	canonical	3	142	junction_13	115.019751575958	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCCAAGAAAGGAATGTGA	53370030	True	NA	76	True	AATAAA	-19	NA	53377644	53459668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_53377924_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53391429_53391499_53399729_53399840_53414614_53414723_53425871_53425966_53428026_53428184_53440581_53440609_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
transcript_154129.known	chr4	+	1878	15	FSM	ENSG00000145216.16	ENST00000306932.10	1878	15	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_8	95.2078285239449	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGTACTATTTC	53370081	True	NA	29	True	AATAAA	-30	NA	53377695	53459621	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_53377924_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53399729_53399840_53425871_53425966_53428026_53428184_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
transcript_154131.known	chr4	-	1109	6	FSM	ENSG00000109220.11	ENST00000263921.8	1109	6	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_3	19.8736005796635	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCCAGCCTTTTTTATTT	-54062358	True	NA	NA	False	CATAAA	-3	NA	54064605	54009788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_54010146_54013836_54013897_54014062_54014120_54048954_54049111_54049250_54049306_54064181
transcript_154133.known	chr4	-	528	6	FSM	ENSG00000109220.11	ENST00000510894.1	528	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	63.8686151407716	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTGTTTTTGTTTTTT	-54064281	False	NA	-2	True	NA	NA	NA	54064298	54009978	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_54010146_54013836_54013897_54014062_54014120_54049038_54049111_54049250_54049306_54064181
transcript_154135.known	chr4	+	6378	23	FSM	ENSG00000134853.12	ENST00000257290.10	6378	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.9800483078676	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAAGGTTTCAGCATTTT	NA	False	NA	3	True	AATAAA	-21	NA	54229292	54298245	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_54229416_54258756_54258818_54261094_54261413_54263666_54263928_54264918_54265050_54267288_54267461_54267551_54267742_54270632_54270749_54272393_54272521_54273536_54273731_54274530_54274626_54274840_54274974_54277387_54277493_54277895_54278007_54278361_54278516_54280315_54280483_54285370_54285487_54285840_54285964_54287429_54287542_54288798_54288899_54289008_54289115_54290312_54290555_54295124
transcript_154138.known	chr4	+	1146	5	FSM	ENSG00000134853.12	ENST00000507536.1	1146	5	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	6.557438524302	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTTCATGTAGCTTGTA	54277109	False	NA	8	True	AATAAA	-17	NA	54277175	54281977	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_54277493_54277895_54278007_54278361_54278516_54280315_54280483_54281580
transcript_154140.known	chr4	+	5147	21	FSM	ENSG00000157404.17	ENST00000288135.6	5147	21	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_9	28.2935946814822	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGTCATTTGATTGTTG	54654059	True	NA	19	True	AATAAA	-20	NA	54657956	54740715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_54658082_54695511_54695782_54698283_54698566_54699629_54699767_54703723_54703893_54707097_54707288_54709423_54709540_54723583_54723699_54725856_54726051_54727217_54727325_54727415_54727543_54727822_54727928_54728010_54728122_54729334_54729486_54731327_54731420_54731870_54731999_54733069_54733193_54736497_54736610_54736720_54736821_54737174_54737281_54738428
transcript_154143.known	chr4	-	5833	30	FSM	ENSG00000128052.10	ENST00000263923.5	5833	30	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_24	37.7641784604394	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATCCCTTTGCAAGGTTG	-55120890	True	NA	-15	True	ATTAAA	-20	NA	55125595	55078480	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_55080164_55081955_55082042_55082535_55082636_55087606_55087759_55088867_55088974_55089373_55089474_55089690_55089803_55089955_55090079_55092616_55092715_55094801_55094956_55095576_55095666_55096228_55096343_55097661_55097767_55098136_55098273_55098696_55098804_55101896_55102029_55102361_55102509_55104642_55104985_55105831_55105941_55106686_55106811_55107736_55107894_55110402_55110567_55110653_55110769_55113303_55113482_55114125_55114266_55114873_55115043_55115280_55115412_55118603_55118801_55121096_55121191_55125226
transcript_154144.known	chr4	-	2037	13	FSM	ENSG00000128052.10	ENST00000512566.1	2037	13	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_7	15.1189726282355	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGTGCAATTCAGGTGC	-55120588	False	NA	NA	False	NA	NA	NA	55125293	55104592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_55104985_55105831_55105941_55106686_55106811_55107736_55107894_55110402_55110567_55110653_55110769_55113303_55113482_55114125_55114266_55114873_55115043_55115280_55115412_55118603_55118801_55121096_55121191_55125226
transcript_154145.nic	chr4	-	1840	11	ISM	ENSG00000128052.10	ENST00000512566.1	2037	13	-304	2094	-2	-2094	5prime_fragment	FALSE	canonical	3	106	junction_5	15.2564740356348	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTTTGAAGTTTTAAAA	-55120892	True	NA	NA	False	AATAAA	-34	NA	55125597	55106686	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_55106811_55107736_55107894_55110402_55110567_55110653_55110769_55113303_55113482_55114125_55114266_55114873_55115043_55115280_55115412_55118603_55118801_55121096_55121191_55125226
transcript_154150.known	chr4	+	4061	5	FSM	ENSG00000128039.13	ENST00000264228.9	4061	5	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_4	27.0970478096785	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCAAGTCGAATTTCTTT	55343079	True	NA	NA	False	ATTAAA	-21	NA	55346241	55373100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_55346558_55359345_55359489_55364073_55364272_55367587_55367723_55369831
transcript_154151.known	chr4	+	2448	5	FSM	ENSG00000288695.1	ENST00000680700.1	2448	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	179.674706066269	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAAGCTGTGACAGATCA	55343170	True	NA	NA	False	NA	NA	NA	55346332	55388160	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_55346558_55359345_55359489_55364073_55364272_55382916_55382981_55386342
transcript_154152.known	chr4	+	2766	4	FSM	ENSG00000128039.13	ENST00000679836.1	2766	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	154.724127257372	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAAGTGCTGGGATTACA	55343050	True	NA	NA	False	NA	NA	NA	55346212	55371911	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_55346558_55359345_55359489_55364073_55364272_55369831
transcript_154153.nnic	chr4	+	1073	4	NIC	ENSG00000128039.13	novel	4061	5	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	146.917210246678	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAAATACTAATGGCAGA	55343052	True	NA	-3	True	AAGAAA	-25	NA	55346214	55370283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_55346558_55359345_55359489_55367587_55367723_55369831
transcript_154154.known	chr4	+	768	3	FSM	ENSG00000128039.13	ENST00000505210.1	768	3	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_2	125	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGGTCCACTTTCTGA	55346400	False	NA	24	True	AATAAA	-21	NA	55346411	55370310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_55346558_55359345_55359489_55369831
transcript_154157.known	chr4	-	10470	23	FSM	ENSG00000134852.15	ENST00000513440.6	10470	23	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_22	8.98299587420773	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATTTCCCTTTCTTTTA	-55546875	False	NA	2	True	ATTAAA	-21	NA	55546909	55427902	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_55435595_55438281_55438538_55442431_55442635_55443686_55443897_55444632_55444786_55448778_55448869_55449395_55449497_55450090_55450233_55453053_55453130_55453676_55453825_55455896_55456004_55456217_55456301_55458891_55459011_55459147_55459262_55463684_55463806_55470716_55470807_55475962_55476055_55478814_55478964_55479639_55479700_55482738_55482829_55489373_55489466_55509911_55510066_55546781
transcript_154168.known	chr4	-	567	4	FSM	ENSG00000134852.15	ENST00000513033.1	567	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	7.58653778449403	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAGTAGATAGTTTCCAG	-55546612	False	NA	NA	False	NA	NA	NA	55546646	55486393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_55486550_55489373_55489466_55509911_55510066_55546481
transcript_15417.known	chr1	-	4080	22	FSM	ENSG00000116584.21	ENST00000313695.11	4080	22	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_21	20.5346894154198	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACTGTCTTCCATAATGT	-155977883	False	NA	-13	True	ATTAAA	-18	NA	155978160	155946850	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155948016_155950298_155950483_155950828_155951273_155951482_155951534_155951740_155951777_155951918_155951987_155952115_155952236_155952627_155952829_155954901_155954970_155957712_155957883_155958319_155958397_155961660_155961910_155962104_155962223_155962592_155962719_155962932_155963184_155964987_155965129_155965302_155965413_155965630_155965761_155966415_155966480_155966819_155966888_155969155_155969301_155978066
transcript_154171.known	chr4	-	476	4	FSM	ENSG00000134852.15	ENST00000509151.5	476	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	7.48331477354788	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGCTGTAGTAAAATGAGC	-55546621	False	NA	NA	False	NA	NA	NA	55546655	55482772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_55482829_55489373_55489466_55509911_55510066_55546481
transcript_154178.known	chr4	+	1657	7	FSM	ENSG00000134851.13	ENST00000508404.5	1657	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	306.234478064694	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTTAAGATGTTTACCT	55386333	True	NA	NA	False	AATACA	-23	NA	55395962	55425804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_55396397_55403235_55403339_55411613_55411840_55417071_55417248_55417802_55417986_55424537_55424644_55425375
transcript_154179.known	chr4	+	1931	6	FSM	ENSG00000134851.13	ENST00000381334.10	1931	6	0	0	0	0	multi-exon	FALSE	canonical	3	555	junction_1	59.7742419441686	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTTTCCTTGTGTGTC	55386327	True	NA	20	True	AATAAA	-17	NA	55395956	55426175	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_55396397_55411613_55411840_55417071_55417248_55417802_55417986_55424537_55424644_55425375
transcript_15418.known	chr1	-	2958	22	FSM	ENSG00000116584.21	ENST00000313667.8	2958	22	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_16	16.6313912407584	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGGCCCCTCCCCCCTGCC	-155978150	False	NA	NA	False	NA	NA	NA	155978427	155947941	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155948016_155950298_155950483_155950828_155951273_155951482_155951534_155951740_155951777_155951918_155951987_155952115_155952236_155952627_155952829_155954901_155954970_155957712_155957883_155958319_155958397_155961660_155961910_155962104_155962223_155962592_155962719_155962932_155963184_155964987_155965129_155965302_155965413_155965630_155965761_155966415_155966480_155966819_155966888_155969155_155969301_155978364
transcript_154188.nic	chr4	+	872	3	ISM	ENSG00000134851.13	ENST00000381334.10	1931	6	-32	8930	-32	0	5prime_fragment	FALSE	canonical	3	555	junction_1	19	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAGCCATGGCACTGTT	55386295	True	NA	NA	False	ATTAAA	-15	NA	55395924	55417245	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_55396397_55411613_55411840_55417071
transcript_154191.known	chr4	+	828	3	FSM	ENSG00000134851.13	ENST00000506198.5	828	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	336	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTCTTCTCTCCAACAT	55386327	True	NA	23	True	AAGAAA	-19	NA	55395956	55425657	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_55396397_55424537_55424644_55425375
transcript_154193.nic	chr4	+	1315	2	ISM	ENSG00000134851.13	ENST00000381334.10	1931	6	-71	13758	-71	261	5prime_fragment	FALSE	canonical	3	555	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGACTGTTAGGGTGTTT	55386256	True	NA	NA	False	NA	NA	NA	55395885	55412417	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_55396397_55411613
transcript_154194.known	chr4	+	433	2	FSM	ENSG00000134851.13	ENST00000514070.1	433	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGCAAAAAAGAATGTGCT	55396191	False	NA	NA	False	NA	NA	NA	55396250	55397405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_55396397_55397118
transcript_154198.known	chr4	-	816	10	FSM	ENSG00000109255.11	ENST00000264218.7	816	10	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_9	40.7624857793729	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCTTAGTGTTTTAAT	-55630474	True	NA	-2	True	ATTAAA	-14	NA	55636298	55595230	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_55595412_55599141_55599182_55600521_55600576_55605274_55605350_55607297_55607349_55607436_55607467_55609119_55609180_55616337_55616386_55630401_55630461_55636080
transcript_154199.nic	chr4	-	872	10	NIC	ENSG00000109255.11	novel	816	10	NA	NA	-122	0	combination_of_known_junctions	FALSE	canonical	3	103	junction_9	91.9344909013149	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTTGCTTAGTGTTTT	-55636810	False	NA	-5	True	ATTAAA	-11	NA	55636820	55595233	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_55595412_55599141_55599182_55600521_55600576_55605274_55605350_55607297_55607349_55607436_55607467_55609119_55609180_55616337_55616386_55630401_55630461_55636543
transcript_15420.known	chr1	-	4169	22	FSM	ENSG00000116584.21	ENST00000361247.9	4169	22	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_16	15.8020636443314	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGTACTGTCTTCCATAA	-155975813	True	NA	-16	True	ATTAAA	-15	NA	155978547	155946853	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_155948016_155950298_155950483_155950828_155951273_155951482_155951534_155951740_155951777_155951918_155951987_155952115_155952236_155952627_155952829_155954901_155954970_155957712_155957883_155958319_155958397_155961660_155961910_155962104_155962223_155962592_155962719_155962932_155963184_155964987_155965132_155965302_155965413_155965630_155965761_155966415_155966480_155966819_155966888_155969155_155969301_155978364
transcript_154201.known	chr4	-	756	9	FSM	ENSG00000109255.11	ENST00000511469.5	756	9	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_7	118.630729577121	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTTAGTGTTTTAATGA	-55636274	False	NA	0	True	ATTAAA	-16	NA	55636284	55595228	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_55595412_55599141_55599182_55600521_55600576_55605274_55605350_55607297_55607349_55607436_55607467_55609119_55609180_55630401_55630461_55636080
transcript_154203.known	chr4	-	658	9	FSM	ENSG00000109255.11	ENST00000507338.1	658	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	121.846983959391	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAACAATGTTGTAAATGT	-55636258	False	NA	-55	True	NA	NA	NA	55636268	55595283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_55595412_55599141_55599182_55600521_55600576_55607297_55607349_55607436_55607467_55609119_55609180_55616337_55616386_55630401_55630461_55636080
transcript_154207.known	chr4	-	693	8	FSM	ENSG00000109255.11	ENST00000505262.5	693	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	131.750227510163	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTTGCTTAGTGTTTT	-55636249	False	NA	-5	True	ATTAAA	-11	NA	55636259	55595233	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_55595412_55599141_55599182_55600521_55600576_55605274_55605350_55609119_55609180_55616337_55616386_55630401_55630461_55636080
transcript_154210.known	chr4	+	3592	19	FSM	ENSG00000090989.18	ENST00000381295.7	3592	19	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	20.4996988836663	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATACAAAAATTAATTGCAA	55851328	True	NA	79	True	ATTAAA	-21	NA	55853647	55905086	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_55853954_55858313_55858448_55860410_55860542_55864226_55864387_55868335_55868524_55870677_55870906_55871100_55871234_55871848_55871959_55877916_55878067_55883822_55883929_55888887_55888933_55890222_55890387_55891314_55891423_55892634_55892712_55893551_55893781_55896716_55896901_55899684_55899885_55902343_55902539_55904342
transcript_154212.known	chr4	+	3357	19	FSM	ENSG00000090989.18	ENST00000346134.11	3357	19	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	24.9359673791855	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTCTATCATATGCTGTC	55851355	True	NA	27	True	AATAAA	-44	NA	55853674	55905034	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_55853798_55858313_55858448_55860410_55860542_55864226_55864387_55868335_55868524_55870677_55870906_55871100_55871234_55871848_55871959_55877916_55878067_55883822_55883929_55888887_55888933_55890222_55890387_55891314_55891423_55892634_55892712_55893551_55893781_55896716_55896901_55899684_55899885_55902343_55902539_55904342
transcript_154213.nic	chr4	+	3475	18	NIC	ENSG00000090989.18	novel	3592	19	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_10	31.106803403646	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGTTGACATTTGATA	55851321	True	NA	0	True	AATAAA	-17	NA	55853640	55905007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_55853954_55858313_55858448_55860410_55860542_55864226_55864387_55868335_55868524_55870677_55870906_55871100_55871234_55871848_55871959_55877916_55878067_55883822_55883929_55890222_55890387_55891314_55891423_55892634_55892712_55893551_55893781_55896716_55896901_55899684_55899885_55902343_55902539_55904342
transcript_154214.known	chr4	+	3248	18	FSM	ENSG00000090989.18	ENST00000349598.6	3248	18	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_10	34.1781410951462	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTCTATCATATGCTGTC	55851419	True	NA	27	True	AATAAA	-44	NA	55853738	55905034	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_55853798_55858313_55858448_55860410_55860542_55864226_55864387_55868335_55868524_55870677_55870906_55871100_55871234_55871848_55871959_55877916_55878067_55883822_55883929_55890222_55890387_55891314_55891423_55892634_55892712_55893551_55893781_55896716_55896901_55899684_55899885_55902343_55902539_55904342
transcript_154217.nic	chr4	+	2435	17	ISM	ENSG00000090989.18	ENST00000346134.11	3357	19	-28	5213	-1	-4756	5prime_fragment	FALSE	canonical	3	44	junction_1	21.9309106913051	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACAGATCACCTTCAGTC	55851327	True	NA	NA	False	AAAAAG	-15	NA	55853646	55899821	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_55853798_55858313_55858448_55860410_55860542_55864226_55864387_55868335_55868524_55870677_55870906_55871100_55871234_55871848_55871959_55877916_55878067_55883822_55883929_55888887_55888933_55890222_55890387_55891314_55891423_55892634_55892712_55893551_55893781_55896716_55896901_55899684
transcript_154219.nic	chr4	+	2552	16	NIC	ENSG00000090989.18	novel	3592	19	NA	NA	-7	-4756	combination_of_known_junctions	FALSE	canonical	3	16	junction_10	29.0619262189476	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACAGATCACCTTCAGTC	55851321	True	NA	NA	False	AAAAAG	-15	NA	55853640	55899821	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_55853954_55858313_55858448_55860410_55860542_55864226_55864387_55868335_55868524_55870677_55870906_55871100_55871234_55871848_55871959_55877916_55878067_55883822_55883929_55890222_55890387_55891314_55891423_55892634_55892712_55893551_55893781_55896716_55896901_55899684
transcript_15422.nic	chr1	-	4411	22	NIC	ENSG00000116584.21	novel	2958	22	NA	NA	-217	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_16	17.1509240279158	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAAGGTACTGTCTTCCAT	-155978487	False	NA	-18	True	ATTAAA	-13	NA	155978764	155946855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_155948016_155950268_155950483_155950828_155951273_155951482_155951534_155951740_155951777_155951918_155951987_155952115_155952236_155952627_155952829_155954901_155954970_155957712_155957883_155958319_155958397_155961660_155961910_155962104_155962223_155962592_155962719_155962932_155963184_155964987_155965129_155965302_155965413_155965630_155965761_155966415_155966480_155966819_155966888_155969155_155969301_155978364
transcript_154232.known	chr4	+	2092	6	FSM	ENSG00000174799.11	ENST00000422247.6	2092	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	5.09901951359278	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	55947248	True	NA	NA	False	NA	NA	NA	55948870	55960925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_55949060_55952085_55952244_55953084_55953276_55954215_55954384_55957222_55957365_55959681
transcript_154233.known	chr4	+	7044	11	FSM	ENSG00000109265.15	ENST00000682029.1	7044	11	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_4	10.432641084596	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCGGCACTGATGGAATT	56047654	True	NA	5	True	AATAAA	-15	NA	56049097	56330609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_56049300_56179283_56179431_56272320_56272493_56298213_56298350_56307534_56307700_56310665_56310735_56313196_56313380_56314039_56316690_56323376_56323568_56324103_56324267_56327643
transcript_154235.known	chr4	-	3581	15	FSM	ENSG00000157426.14	ENST00000205214.11	3581	15	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	11.8226693349718	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGAAACTTGTCTACACTTG	-56386213	True	NA	NA	False	ATTAAA	-25	NA	56387491	56338289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_56338792_56342834_56342967_56343561_56343685_56345126_56345291_56349262_56350059_56351341_56351458_56353403_56353597_56354038_56354212_56354704_56354812_56355181_56355424_56371450_56371644_56378147_56378465_56382476_56382598_56384069_56384342_56387361
transcript_154237.known	chr4	-	3241	14	FSM	ENSG00000157426.14	ENST00000513376.5	3241	14	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_13	20.1647064103444	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGAAACTTGTCTACACTTG	-56386145	True	NA	NA	False	ATTAAA	-25	NA	56387423	56338289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_56338792_56342834_56342967_56343561_56343685_56345126_56345291_56349262_56350059_56351341_56351458_56353403_56353597_56354038_56354212_56354704_56354812_56355181_56355424_56371450_56371644_56378147_56378465_56382476_56382598_56387361
transcript_154238.known	chr4	-	3480	14	FSM	ENSG00000157426.14	ENST00000602986.5	3480	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_12	21.1763516645924	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGTCTACACTTGATT	-56387498	False	NA	NA	False	ATTAAA	-28	NA	56387508	56338286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_56338792_56342834_56342967_56343561_56343685_56345126_56345291_56349262_56350059_56351341_56351458_56353403_56353597_56354038_56354212_56354704_56354812_56355181_56355424_56371450_56371644_56378147_56378465_56384069_56384342_56387361
transcript_154243.nic	chr4	-	683	4	ISM	ENSG00000157426.14	ENST00000502617.1	3004	11	4	29382	4	3449	5prime_fragment	FALSE	canonical	3	68	junction_2	6.64997911442	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAGTTCTGAGCATGTCA	-56386218	True	NA	NA	False	AATAAA	-4	NA	56387496	56378309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_56378465_56382476_56382598_56384069_56384342_56387361
transcript_154246.known	chr4	-	1222	3	FSM	ENSG00000157426.14	ENST00000510012.1	1222	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	7.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTTTGCCCATTTTC	-56386194	True	NA	NA	False	TATAAA	-16	NA	56387472	56381758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_56382598_56384069_56384342_56387361
transcript_154247.known	chr4	-	3004	11	FSM	ENSG00000157426.14	ENST00000502617.1	3004	11	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	7.46726188103779	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTCTCATAGTTTCT	-56386222	True	NA	NA	False	NA	NA	NA	56387500	56348927	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_56350059_56351341_56351458_56353403_56353597_56354038_56354212_56354704_56354812_56355181_56355424_56371450_56371644_56378147_56378465_56382476_56382598_56384069_56384342_56387361
transcript_15425.nic	chr1	-	4414	22	NIC	ENSG00000116584.21	novel	4169	22	NA	NA	-217	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_16	16.3604522887654	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAAGGTACTGTCTTCCAT	-155978487	False	NA	-18	True	ATTAAA	-13	NA	155978764	155946855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_155948016_155950268_155950483_155950828_155951273_155951482_155951534_155951740_155951777_155951918_155951987_155952115_155952236_155952627_155952829_155954901_155954970_155957712_155957883_155958319_155958397_155961660_155961910_155962104_155962223_155962592_155962719_155962932_155963184_155964987_155965132_155965302_155965413_155965630_155965761_155966415_155966480_155966819_155966888_155969155_155969301_155978364
transcript_154252.known	chr4	-	3682	11	FSM	ENSG00000128059.8	ENST00000264220.6	3682	11	0	0	0	0	multi-exon	FALSE	canonical	3	563	junction_6	32.9915140604368	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTGTCCTTTTTTTTT	-56424687	True	NA	-11	True	GATAAA	-24	NA	56435615	56393361	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_56395549_56396618_56396740_56399178_56399401_56400783_56400912_56401329_56401482_56402108_56402182_56403039_56403186_56403288_56403402_56406494_56406702_56407649_56407717_56435349
transcript_154260.nic	chr4	-	819	5	ISM	ENSG00000128059.8	ENST00000264220.6	3682	11	-43	9701	-43	0	5prime_fragment	FALSE	canonical	3	639	junction_2	14.0356688476182	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGTCTGATATAAATGACA	-56424730	True	NA	NA	False	NA	NA	NA	56435658	56403062	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_56403186_56403288_56403402_56406494_56406702_56407649_56407717_56435349
transcript_154263.nic	chr4	-	713	2	ISM	ENSG00000128059.8	ENST00000510643.5	808	6	-146	4246	-39	-4235	5prime_fragment	FALSE	canonical	3	649	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGGATGACAAAGATAACAA	-56424726	True	NA	NA	False	AAAAAG	-15	NA	56435654	56407308	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_56407717_56435349
transcript_154265.known	chr4	+	1514	10	FSM	ENSG00000128050.9	ENST00000505164.5	1514	10	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	997.063329959846	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCAGGCTGACAAGAAAAT	56434092	True	NA	-95	True	NA	NA	NA	56435751	56459499	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_56435976_56436261_56436329_56441662_56441861_56446694_56446874_56448417_56448598_56448709_56448824_56450618_56450703_56451871_56452053_56453602_56453762_56459371
transcript_154267.known	chr4	+	3339	10	FSM	ENSG00000128050.9	ENST00000264221.6	3339	10	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	996.460736808029	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGGTCTCTGAAGTCAC	56434089	True	NA	36	True	ATTAAA	-25	NA	56435748	56461368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_56435929_56436261_56436329_56441662_56441861_56446694_56446874_56448417_56448598_56448709_56448824_56450618_56450703_56451871_56452053_56453602_56453762_56459371
transcript_154275.known	chr4	+	3297	10	FSM	ENSG00000128050.9	ENST00000399688.7	3297	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1349.59912658135	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTTTCATGGTCTCTG	56376041	True	NA	29	True	ATTAAA	-18	NA	56436137	56461361	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_56436329_56441662_56441861_56446356_56446378_56446694_56446874_56448417_56448598_56448709_56448824_56450618_56450703_56451871_56452053_56453602_56453762_56459371
transcript_154276.known	chr4	+	3855	19	FSM	ENSG00000174780.17	ENST00000642900.1	3855	19	0	0	0	0	multi-exon	FALSE	canonical	3	452	junction_7	58.8146544684819	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAAGGTGTTTTGGGTGTTG	56460260	True	NA	16	True	AATAAA	-23	NA	56467616	56503681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_56467745_56469652_56469774_56471719_56471844_56474053_56474198_56474279_56474392_56476670_56476703_56478378_56478504_56478591_56478650_56483138_56483271_56484735_56484865_56486324_56486398_56487948_56488014_56489387_56489484_56490332_56490437_56490567_56490646_56491430_56491569_56495356_56495395_56500535_56500696_56501683
transcript_154277.nic	chr4	+	1717	17	ISM	ENSG00000174780.17	ENST00000642900.1	3855	19	-22	8289	-22	0	5prime_fragment	FALSE	canonical	3	452	junction_7	58.0974060845233	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGTAAGGCATTAAAAAAGT	56460238	True	NA	57	True	AAAAAG	-18	NA	56467594	56495392	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_56467745_56469652_56469774_56471719_56471844_56474053_56474198_56474279_56474392_56476670_56476703_56478378_56478504_56478591_56478650_56483138_56483271_56484735_56484865_56486324_56486398_56487948_56488014_56489387_56489484_56490332_56490437_56490567_56490646_56491430_56491569_56495356
transcript_154279.nic	chr4	+	896	9	ISM	ENSG00000174780.17	ENST00000642900.1	3855	19	-22	20513	-22	5996	5prime_fragment	FALSE	canonical	3	452	junction_7	76.7918249229695	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAAATTAACCAATGCGGA	56460238	True	NA	NA	False	GATAAA	-45	NA	56467594	56483168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_56467745_56469652_56469774_56471719_56471844_56474053_56474198_56474279_56474392_56476670_56476703_56478378_56478504_56478591_56478650_56483138
transcript_154281.nic	chr4	+	803	7	ISM	ENSG00000174780.17	ENST00000505314.2	1006	12	-141	10903	-22	1326	5prime_fragment	FALSE	canonical	3	499	junction_4	63.7976401514107	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAGTGAGTTATTAAAAG	56460238	True	NA	NA	False	AATAAA	-2	NA	56467594	56478498	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_56467745_56469652_56469774_56471719_56471844_56474053_56474198_56474279_56474392_56476670_56476703_56478378
transcript_154282.known	chr4	+	745	5	FSM	ENSG00000174780.17	ENST00000504757.2	745	5	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_4	68.3168171096985	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTCTCCAAGTTCCTGT	56460261	True	NA	NA	False	ATTAAA	-22	NA	56467617	56474508	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_56467745_56469652_56469774_56471719_56471844_56474053_56474198_56474279
transcript_154285.known	chr4	+	1392	4	FSM	ENSG00000196503.5	ENST00000360096.3	1392	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.39934634239519	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAGCATTTGTCCCATTT	56505195	False	NA	NA	False	AATGAA	-5	NA	56505208	56524448	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_56505510_56511184_56511348_56518677_56518854_56523696
transcript_154286.known	chr4	-	613	4	FSM	ENSG00000128040.12	ENST00000248701.8	613	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	1.69967317119759	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTACTGTTCTCTGTTG	-56821600	True	NA	-1	True	AATAAA	-17	NA	56821742	56809860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_56810185_56811684_56811795_56820535_56820580_56821607
transcript_154288.known	chr4	-	722	4	FSM	ENSG00000128040.12	ENST00000506738.6	722	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	6.48074069840786	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTACTGTTCTCTGTTG	-56821559	True	NA	-1	True	AATAAA	-17	NA	56821701	56809860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_56810185_56811684_56811795_56820535_56820580_56821457
transcript_154295.known	chr4	-	2218	7	FSM	ENSG00000084092.7	ENST00000264230.5	2218	7	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_4	27.3643117135359	306	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTTTTTCTTTTTTCTT	-56973913	True	NA	-10	True	AATAAA	-14	NA	56977606	56963349	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_56963662_56964405_56964527_56966619_56966737_56968383_56968516_56973147_56973354_56973857_56974023_56976441
transcript_154299.known	chr4	+	7309	4	FSM	ENSG00000084093.19	ENST00000309042.12	7309	4	0	0	0	0	multi-exon	TRUE	canonical	3	234	junction_1	39.0981670499611	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCCTTTGTTTATTATT	56904885	True	NA	5	True	AATAAA	-14	NA	56907899	56935844	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_56908214_56910629_56911537_56919786_56919871_56929840
transcript_154300.nic	chr4	+	2013	4	NIC	ENSG00000084093.19	novel	7069	5	NA	NA	304	-1964	intron_retention	FALSE	canonical	3	75	junction_1	112.038683795672	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGATGTGGCTGGAAAGAA	56908379	False	NA	-33	True	AATAAA	-2	NA	56908397	56930220	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_56909040_56910629_56911537_56919786_56919871_56929840
transcript_154301.known	chr4	+	7371	4	FSM	ENSG00000084093.19	ENST00000675105.1	7371	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	142.460130874883	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAATAAAGTTTTAAAAAC	56909146	False	NA	-17	True	NA	NA	NA	56909189	56935822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_56909588_56910629_56911537_56919786_56919871_56929840
transcript_154306.known	chr4	-	447	1	FSM	ENSG00000269949.1	ENST00000602820.1	447	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAACTTGTTGTAGACCTT	-56961354	False	NA	-3	True	ATTAAA	-26	NA	56961373	56960926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_56960900_56961400
transcript_154307.known	chr4	+	4108	26	FSM	ENSG00000047315.17	ENST00000381227.5	4108	26	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	106.35101127869	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTGTGATCTTTATTT	56977386	True	NA	16	True	AATAAA	-16	NA	56977741	57031158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_56977809_56978639_56979005_56986353_56986427_56990747_56990899_56994403_56994517_56994646_56994867_56995250_56995410_56999616_56999782_57005245_57005443_57005599_57005720_57006815_57007003_57010360_57010505_57010747_57010888_57010988_57011101_57015501_57015657_57017042_57017242_57017559_57017729_57020898_57020996_57022151_57022247_57023329_57023581_57023661_57023752_57024004_57024113_57024885_57025000_57025376_57025538_57030203_57030400_57030898
transcript_154312.known	chr4	+	3666	24	FSM	ENSG00000047315.17	ENST00000431623.6	3666	24	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	111.637951146131	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTGTGATCTTTATTT	56974174	True	NA	16	True	AATAAA	-16	NA	56978863	57031158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_56979005_56986353_56986427_56994403_56994517_56994646_56994867_56995250_56995410_56999616_56999782_57005245_57005443_57005599_57005720_57006815_57007003_57010360_57010505_57010747_57010888_57010988_57011101_57015501_57015657_57017042_57017242_57017559_57017729_57020898_57020996_57022151_57022247_57023329_57023581_57023661_57023752_57024004_57024113_57024885_57025000_57025376_57025538_57030203_57030400_57030898
transcript_154313.known	chr4	+	640	2	FSM	ENSG00000150471.17	ENST00000509089.1	640	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGACCAGAAAGAAAAAATAA	NA	False	NA	NA	False	AATATA	-17	NA	61587367	61677392	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_61587441_61676825
transcript_154314.known	chr4	+	870	1	FSM	ENSG00000243199.1	ENST00000466377.1	870	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTCTTAAGAACCTAATTA	NA	False	NA	NA	False	NA	NA	NA	65573458	65574328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_65573500_65574300
transcript_154318.known	chr4	-	6823	19	FSM	ENSG00000145241.11	ENST00000273853.11	6823	19	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_10	14.5496171092126	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTTTGTGTAAATTTAAG	-67542850	True	NA	-11	True	AATAAA	-23	NA	67545503	67468761	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_67472676_67474887_67474979_67489966_67490122_67492179_67492276_67492868_67492998_67493883_67493989_67495158_67495213_67505204_67505285_67506787_67506935_67508813_67509106_67512401_67512570_67514073_67514688_67518155_67518369_67519216_67519503_67530814_67530915_67539839_67539935_67540979_67541051_67544148_67544196_67545337
transcript_154322.known	chr4	-	2917	14	FSM	ENSG00000145241.11	ENST00000510189.5	2917	14	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_5	14.3535246068362	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGCTGAGATTACAGGT	-67542850	True	NA	NA	False	NA	NA	NA	67545503	67493404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_67493989_67495158_67495213_67505204_67505285_67506787_67506935_67508813_67509106_67512401_67512570_67514073_67514688_67518155_67518369_67519216_67519503_67530814_67530915_67539839_67539935_67540979_67541051_67544148_67544196_67545337
transcript_154324.nic	chr4	-	1511	8	ISM	ENSG00000145241.11	ENST00000510189.5	2917	14	-103	20853	-103	-2208	5prime_fragment	FALSE	canonical	3	78	junction_2	9.3328474120349	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAGAAGAAAATTCATGGC	-67545572	False	NA	NA	False	TATAAA	-8	NA	67545606	67514257	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_67514688_67518155_67518369_67519216_67519503_67530814_67530915_67539839_67539935_67540979_67541051_67544148_67544196_67545337
transcript_154327.nic	chr4	-	637	6	ISM	ENSG00000145241.11	ENST00000510189.5	2917	14	-103	26043	-103	-7398	5prime_fragment	FALSE	canonical	3	87	junction_2	6.95701085237043	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACACCTGACTCGAAAAAAA	-67545572	False	NA	NA	False	NA	NA	NA	67545606	67519447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_67519503_67530814_67530915_67539839_67539935_67540979_67541051_67544148_67544196_67545337
transcript_154330.nic	chr4	-	452	4	ISM	ENSG00000145241.11	ENST00000510189.5	2917	14	-103	46465	-103	-27820	5prime_fragment	FALSE	canonical	3	91	junction_1	3.09120616516523	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACTTGTATTCAGTCACC	-67545572	False	NA	NA	False	AATAAA	-2	NA	67545606	67539869	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_67539935_67540979_67541051_67544148_67544196_67545337
transcript_154331.known	chr4	-	9540	33	FSM	ENSG00000033178.13	ENST00000322244.10	9540	33	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_20	20.0292510703096	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTTGCACATTTTTTTAA	-67696527	True	NA	-2	True	AATAAA	-21	NA	67701155	67612651	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_67619133_67622830_67622926_67623134_67623223_67624125_67624254_67624993_67625188_67626359_67626478_67629070_67629143_67630465_67630536_67631707_67631772_67631856_67631909_67633344_67633474_67634241_67634323_67634428_67634519_67635452_67635559_67638942_67639125_67641150_67641229_67644697_67644779_67645937_67646017_67646723_67646792_67649067_67649212_67662188_67662256_67663138_67663216_67663884_67663948_67665188_67665293_67668550_67668675_67670469_67670593_67673696_67673778_67677610_67677723_67678438_67678534_67681562_67681592_67682118_67682214_67696644_67696708_67701048
transcript_154338.nic	chr4	-	1797	12	ISM	ENSG00000033178.13	ENST00000420827.2	1664	13	-52	802	-50	22	5prime_fragment	FALSE	canonical	3	168	junction_9	21.2151512987322	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAACTTATTTATATACTG	-67696577	False	NA	NA	False	AAAACA	-8	NA	67701205	67662464	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_67663216_67663884_67663948_67665188_67665293_67668550_67668675_67670469_67670593_67673696_67673778_67677610_67677723_67678438_67678534_67681562_67681592_67682118_67682214_67696644_67696708_67701048
transcript_154339.known	chr4	-	2387	11	FSM	ENSG00000033178.13	ENST00000429659.7	2387	11	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_8	21.5165052924493	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAACAAAAAA	-67696520	True	NA	NA	False	NA	NA	NA	67701148	67662486	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_67663948_67665188_67665293_67668550_67668675_67670469_67670593_67673696_67673778_67677610_67677723_67678438_67678534_67681562_67681592_67682118_67682214_67696644_67696708_67701048
transcript_154340.known	chr4	-	1664	13	FSM	ENSG00000033178.13	ENST00000420827.2	1664	13	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_1	21.6480689413372	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTGAAGATTCTATTAT	-67696525	True	NA	NA	False	TATAAA	-20	NA	67701153	67661662	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_67662256_67663138_67663216_67663884_67663948_67665188_67665293_67668550_67668675_67670469_67670593_67673696_67673778_67677610_67677723_67678438_67678534_67681562_67681592_67682118_67682214_67696644_67696708_67701048
transcript_154341.known	chr4	+	1445	3	FSM	ENSG00000248049.8	ENST00000498917.2	1445	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	35	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTATTTGCGCTGGTGTT	67699970	True	NA	9	True	AATAAA	-1	NA	67701279	67722505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_67701485_67720421_67720633_67721476
transcript_154342.known	chr4	+	2595	3	FSM	ENSG00000248049.8	ENST00000654961.1	2595	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	21	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTCTCCAAATATTTTA	67699951	True	NA	-12	True	NA	NA	NA	67701260	67723217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_67701485_67720421_67721052_67721476
transcript_154345.known	chr4	+	2233	2	FSM	ENSG00000248049.8	ENST00000506606.1	2233	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCCTATTTGCGCTGGT	67700023	True	NA	6	True	ATTAAA	-14	NA	67701332	67722502	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_67701485_67720421
transcript_154350.known	chr4	-	6233	17	FSM	ENSG00000083896.13	ENST00000344157.9	6233	17	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_16	52.0408493397254	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATGTCTTAAACACAGACT	NA	False	NA	NA	False	AATAAA	-26	NA	68350090	68310386	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_68314324_68316313_68316449_68318518_68318582_68318689_68318730_68318825_68318863_68320122_68320206_68322748_68322916_68324138_68324224_68330001_68330120_68330201_68330311_68332102_68332198_68332793_68332848_68333307_68333398_68337026_68337451_68337571_68337901_68338282_68338385_68349725
transcript_154352.known	chr4	-	2983	17	FSM	ENSG00000083896.13	ENST00000579690.5	2983	17	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_4	67.9719611310428	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTATCTTTTGTATCTTTT	-68349330	True	NA	-6	True	AATAAA	-16	NA	68349753	68313323	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_68314324_68316313_68316449_68318518_68318582_68318689_68318754_68318825_68318863_68320122_68320206_68322748_68322916_68324138_68324224_68330001_68330120_68330201_68330311_68332102_68332198_68332793_68332848_68333307_68333398_68337026_68337451_68337571_68337901_68338282_68338385_68349725
transcript_154357.known	chr4	-	515	4	FSM	ENSG00000083896.13	ENST00000510746.1	515	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	84.1466973010032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTCTAGACAACTGGTTT	NA	False	NA	-110	True	NA	NA	NA	68350045	68337839	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_68337901_68338282_68338385_68344048_68344081_68349725
transcript_154358.nic	chr4	-	660	3	ISM	ENSG00000083896.13	ENST00000355665.7	3244	16	-59	24445	-58	0	5prime_fragment	FALSE	canonical	3	172	junction_2	3.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTCAGCCACAGAGTAT	NA	False	NA	-36	True	NA	NA	NA	68350148	68337765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_68337901_68338282_68338385_68349725
transcript_154360.nic	chr4	-	514	2	ISM	ENSG00000083896.13	ENST00000355665.7	3244	16	-59	24973	-58	-454	5prime_fragment	FALSE	canonical	3	172	junction_1	0	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGAAAAAGGGTATGTAAG	NA	False	NA	-12	True	GATAAA	-3	NA	68350148	68338293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_68338385_68349725
transcript_154361.known	chr4	+	2122	10	FSM	ENSG00000087128.10	ENST00000305363.9	2122	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	3.77123616632825	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCTTGACATTATGATAT	68447215	True	NA	3	True	AATAAA	-15	NA	68447462	68497604	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_68447524_68461820_68461946_68466630_68466753_68468878_68468947_68471459_68471624_68474722_68474762_68476260_68476439_68477368_68477629_68478848_68478992_68496642
transcript_154362.known	chr4	-	477	2	FSM	ENSG00000272626.1	ENST00000608365.1	477	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGGCACTCATTTT	NA	False	NA	NA	False	AATAAA	-21	NA	68906983	68901007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_68901376_68906874
transcript_154363.known	chr4	+	2020	1	FSM	ENSG00000132467.4	ENST00000254803.4	2020	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATATGTTCTGTGTGGT	70677305	True	NA	10	True	AATAAA	-22	NA	70688531	70690551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_70688500_70690600
transcript_154371.nic	chr4	+	1896	13	NIC	ENSG00000018189.13	novel	2143	12	NA	NA	-123	347	combination_of_known_junctions	FALSE	canonical	3	59	junction_12	18.2366770243071	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAGAGGGGGTAGCTTGA	NA	False	NA	NA	False	NA	NA	NA	70704677	70793904	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_70705295_70762518_70762693_70763551_70763670_70764474_70764577_70768537_70768662_70773510_70773573_70775167_70775234_70778368_70778439_70783090_70783184_70784795_70784880_70788805_70788974_70789494_70789593_70793784
transcript_154372.known	chr4	+	2143	12	FSM	ENSG00000018189.13	ENST00000417478.6	2143	12	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_8	8.20602479737946	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGTAGTTCTGTAGCTT	70703473	True	NA	NA	False	NA	NA	NA	70704800	70790082	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_70705295_70762518_70762693_70763551_70763670_70764474_70764577_70768537_70768662_70773510_70773573_70775167_70775234_70778368_70778439_70783090_70783184_70784795_70784880_70788805_70788974_70789494
transcript_154384.known	chr4	-	1765	10	FSM	ENSG00000132463.15	ENST00000514161.5	1765	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_9	213.053867876845	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTAAATTTTGCTGTATT	-70831171	False	NA	NA	False	NA	NA	NA	70839343	70820374	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_70820862_70824293_70824369_70825295_70825432_70826123_70826246_70827851_70828037_70831538_70831675_70832306_70832451_70833117_70833274_70836157_70836315_70839176
transcript_154385.known	chr4	-	6610	10	FSM	ENSG00000132463.15	ENST00000254799.11	6610	10	0	0	0	0	multi-exon	FALSE	canonical	3	515	junction_5	65.7257677262874	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTTGTGAACCTACATT	-70831718	True	NA	-14	True	AATAAA	-21	NA	70839890	70815782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_70820862_70824293_70824369_70825295_70825432_70826123_70826246_70827851_70828037_70831538_70831675_70832306_70832451_70833117_70833274_70836157_70836315_70839470
transcript_154394.known	chr4	-	2491	10	FSM	ENSG00000132463.15	ENST00000499044.6	2491	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	212.752856097815	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCCTGTATGCTTTCTT	-70831331	False	NA	-4	True	AATAAA	-32	NA	70839503	70819757	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_70820862_70824293_70824369_70825295_70825432_70826123_70826246_70827851_70828037_70831538_70831675_70832306_70832451_70833117_70833274_70836157_70836315_70839227
transcript_154398.known	chr4	-	3561	9	FSM	ENSG00000132463.15	ENST00000505068.5	3561	9	0	0	0	0	multi-exon	FALSE	canonical	3	515	junction_4	69.6095135380215	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTACCTAAGAGTATTTAT	-70831725	True	NA	-14	True	AATAAA	-23	NA	70839897	70819530	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_70820862_70824293_70824369_70825295_70826246_70827851_70828037_70831538_70831675_70832306_70832451_70833117_70833274_70836157_70836315_70839470
transcript_154414.known	chr4	-	2682	11	NNC	ENSG00000132463.15	novel	6610	10	NA	NA	10	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	204.408903915656	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATTACCTAAGAGTATTT	-70831708	True	NA	-16	True	AATAAA	-21	NA	70839880	70819532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_70820862_70824293_70824369_70825295_70825432_70826123_70826246_70827851_70828037_70831538_70831675_70832306_70832451_70833117_70833274_70836157_70836315_70839470_70839554_70839721
transcript_154415.known	chr4	+	2506	7	FSM	ENSG00000156136.10	ENST00000286648.10	2506	7	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_5	21.1581347634111	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTCAGTGTGGTGGTC	70993482	True	NA	20	True	AATAAA	-31	NA	70993648	71030914	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_70993927_70998066_70998183_71022366_71022561_71023558_71023707_71025815_71025932_71026664_71026756_71029351
transcript_154416.known	chr4	+	2683	7	FSM	ENSG00000156136.10	ENST00000503359.5	2683	7	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_1	86.3802961071306	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTCAGTGTGGTGGTC	70992867	True	NA	20	True	AATAAA	-31	NA	70993562	71030914	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_70994018_70998066_70998183_71022366_71022561_71023558_71023707_71025815_71025932_71026664_71026756_71029351
transcript_154419.known	chr4	+	1964	4	FSM	ENSG00000056291.19	ENST00000308744.12	1964	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	10.0332779621949	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTGCTGTTGTTTTTCT	72031428	True	NA	5	True	TATAAA	-42	NA	72031999	72148305	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_72032201_72128584_72128920_72138039_72138140_72146977
transcript_154422.known	chr4	+	1234	3	FSM	ENSG00000056291.19	ENST00000344413.6	1234	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	8	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGCTAGTGTGATAATC	NA	False	NA	NA	False	ATTAAA	-29	NA	72031901	72147812	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_72032201_72138039_72138140_72146977
transcript_154425.nnic	chr4	-	2651	7	NNC	ENSG00000163626.17	novel	6846	6	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.7460085737335	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGTCATTTCTTTGATTG	-73065015	True	NA	-7	True	AATAAA	-22	NA	73069741	73056080	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_73057325_73057800_73058288_73061812_73061921_73064777_73064900_73065249_73065414_73068028_73068130_73069316
transcript_154426.nnic	chr4	-	2330	7	NNC	ENSG00000163626.17	novel	6846	6	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.7460085737335	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTAGTCATTTCTTTGA	-73065015	True	NA	-10	True	AATAAA	-19	NA	73069741	73056083	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_73057167_73057960_73058288_73061812_73061921_73064777_73064900_73065249_73065414_73068028_73068130_73069316
transcript_154427.nnic	chr4	-	2418	7	NNC	ENSG00000163626.17	novel	6846	6	NA	NA	-37	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.7460085737335	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTAGTCATTTCTTTGA	-73065066	True	NA	-10	True	AATAAA	-19	NA	73069792	73056083	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_73057181_73057937_73058288_73061812_73061921_73064777_73064900_73065249_73065414_73068028_73068130_73069316
transcript_154428.nnic	chr4	-	2518	7	NNC	ENSG00000163626.17	novel	6846	6	NA	NA	-37	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.7460085737335	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTAGTCATTTCTTTGA	-73065066	True	NA	-10	True	AATAAA	-19	NA	73069792	73056083	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_73057260_73057916_73058288_73061812_73061921_73064777_73064900_73065249_73065414_73068028_73068130_73069316
transcript_154429.nnic	chr4	-	2500	7	NNC	ENSG00000163626.17	novel	6846	6	NA	NA	-37	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.7460085737335	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAATTCATTAGTCATTT	-73065066	True	NA	-16	True	AATAAA	-13	NA	73069792	73056089	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_73057234_73057902_73058288_73061812_73061921_73064777_73064900_73065249_73065414_73068028_73068130_73069316
transcript_154432.known	chr4	-	1083	6	FSM	ENSG00000163626.17	ENST00000510031.1	1083	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	21.7568380055559	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATTTTCCAATAATTTTG	-73065000	True	NA	NA	False	AAGAAA	-5	NA	73069726	73058113	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_73058288_73061812_73061921_73064777_73064900_73065249_73065414_73068028_73068134_73069316
transcript_154443.nic	chr4	-	4990	25	ISM	ENSG00000132466.20	ENST00000358602.9	10797	34	-374	29087	-374	0	5prime_fragment	FALSE	canonical	0	0	junction_6	50.3297460090286	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGGAAACTAGAAGAAATT	NA	False	NA	51	True	AAAAAG	-36	NA	73259172	73102462	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_73102548_73113791_73113909_73115820_73115917_73118687_73118851_73120161_73120338_73120880_73121095_73121616_73121760_73124912_73125059_73125200_73125313_73135116_73135266_73139530_73140284_73141740_73141844_73142241_73142386_73142639_73142768_73144744_73144833_73146763_73146874_73147240_73147433_73148812_73149051_73151429_73151525_73153879_73154114_73155630_73155779_73156018_73156167_73161191_73161349_73177379_73177534_73258275
transcript_154453.nic	chr4	-	4237	24	ISM	ENSG00000132466.20	ENST00000330838.10	7734	33	-374	26777	-374	0	5prime_fragment	FALSE	canonical	0	0	junction_6	51.858904112291	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGGAAACTAGAAGAAATT	NA	False	NA	51	True	AAAAAG	-36	NA	73259172	73102462	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_73102548_73113791_73113909_73115820_73115917_73118687_73118851_73120161_73120338_73120880_73121095_73121616_73121760_73124912_73125059_73125200_73125313_73135116_73135266_73141740_73141844_73142241_73142386_73142639_73142768_73144744_73144833_73146763_73146874_73147240_73147433_73148812_73149051_73151429_73151525_73153879_73154114_73155630_73155779_73156018_73156167_73161191_73161349_73177379_73177534_73258275
transcript_154468.nic	chr4	-	3090	16	NNC	ENSG00000132466.20	novel	10797	34	NA	NA	-374	21167	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	50.7339027563314	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTTGGAGGAACTACAGA	NA	False	NA	NA	False	AAGAAA	-6	NA	73259172	73140024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_73140284_73141740_73141844_73142241_73142386_73142639_73142750_73142754_73142768_73144744_73144833_73146763_73146874_73147240_73147433_73148812_73149051_73151429_73151525_73153879_73154114_73155630_73155779_73156018_73156167_73161191_73161349_73177379_73177534_73258275
transcript_154472.known	chr4	+	2426	15	FSM	ENSG00000081051.8	ENST00000395792.7	2426	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.0734595787918	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTCATCAATTAAATTT	NA	False	NA	NA	False	AATATA	-6	NA	73436220	73456174	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_73436348_73437159_73437212_73438173_73438307_73440601_73440814_73442295_73442429_73443346_73443445_73444992_73445123_73447461_73447677_73449334_73449468_73450035_73450134_73450614_73450754_73452400_73452625_73453764_73453898_73455235_73455291_73455630
transcript_154473.known	chr4	+	728	5	FSM	ENSG00000081051.8	ENST00000508838.5	728	5	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_1	10.6301458127346	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCCTTATCACAGAAATAA	NA	False	NA	NA	False	GATAAA	-16	NA	73450548	73455741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_73450754_73452400_73452625_73453764_73453898_73455235_73455291_73455630
transcript_154474.known	chr4	+	476	4	FSM	ENSG00000081051.8	ENST00000506820.1	476	4	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	12.4721912892465	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTTCCAAGTTTGCTTA	73453363	False	NA	NA	False	AATAAA	-16	NA	73453489	73455777	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_73453631_73453764_73453898_73455235_73455291_73455630
transcript_154475.known	chr4	+	1537	4	FSM	ENSG00000124875.10	ENST00000226317.10	1537	4	0	0	0	0	multi-exon	TRUE	canonical	3	45	junction_3	6.94422221866655	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTTGTTTCTCCTTCT	73835893	True	NA	4	True	AATAAA	-15	NA	73836677	73838760	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_73836860_73836963_73837097_73837202_73837287_73837622
transcript_154477.known	chr4	+	1174	4	FSM	ENSG00000163739.5	ENST00000395761.4	1174	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	3.29983164553722	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCAATTTTTTAATTGT	73869274	True	NA	NA	False	NA	NA	NA	73869392	73871308	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_73869571_73869668_73869793_73869905_73869990_73870520
transcript_154478.nnic	chr4	-	666	3	FSM	ENSG00000163737.5	ENST00000687529.1	715	3	46	3	46	-3	multi-exon	FALSE	canonical	3	13	junction_2	15	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGTAGTATAGTCAAAATA	-73981551	True	NA	-14	True	AATAAA	-14	NA	73981981	73981076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_73981292_73981416_73981544_73981657
transcript_154479.known	chr4	-	773	3	FSM	ENSG00000163737.5	ENST00000296029.4	773	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	1	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAGTAAATAAATAAGACT	-73981597	True	NA	NA	False	AATAAA	-30	NA	73982027	73980810	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_73981292_73981416_73981544_73981862
transcript_154480.known	chr4	-	2436	4	FSM	ENSG00000163735.7	ENST00000296027.5	2436	4	0	0	0	0	multi-exon	TRUE	canonical	3	55	junction_3	17.4610678049451	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATATTGTTTCTCCTTCC	-73997863	True	NA	-3	True	AATAAA	-24	NA	73998677	73995641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_73997656_73998011_73998096_73998205_73998339_73998472
transcript_154482.known	chr4	-	1075	4	FSM	ENSG00000163734.4	ENST00000296026.4	1075	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	1.69967317119759	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTATGTGGTTTTTCAAA	-74037993	True	NA	NA	False	AATAAA	-18	NA	74038689	74036588	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_74037278_74038092_74038177_74038289_74038414_74038511
transcript_154483.known	chr4	+	2389	9	FSM	ENSG00000163738.19	ENST00000359107.10	2389	9	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_8	48.7697075549977	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTATTCTTTTTTTCTGT	74156427	True	NA	NA	False	AATAAA	-17	NA	74158117	74303099	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_74158282_74160054_74160089_74174505_74174691_74175280_74175404_74199793_74199947_74201262_74201371_74225301_74225395_74281424_74281551_74301696
transcript_154484.known	chr4	+	2355	8	FSM	ENSG00000163738.19	ENST00000325278.7	2355	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	7.34569150410425	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTATTCTTTTTTTCTGT	74156427	True	NA	NA	False	AATAAA	-17	NA	74158117	74303099	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_74158282_74174505_74174691_74175280_74175404_74199793_74199947_74201262_74201371_74225301_74225395_74281424_74281551_74301696
transcript_154485.known	chr4	+	2363	2	FSM	ENSG00000163738.19	ENST00000461101.1	2363	2	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAACCATCTTGCTGCTTT	74156427	True	NA	18	True	ATTAAA	-19	NA	74158117	74162253	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_74158282_74160054
transcript_154493.known	chr4	+	5011	4	FSM	ENSG00000169116.11	ENST00000307428.7	5011	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	10.2089285540757	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTCTGTGGGTGATTC	74932072	True	NA	14	True	ATTAAA	-16	NA	74933115	75050113	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_74933371_75012424_75013151_75033882_75033962_75046162
transcript_154497.known	chr4	+	4308	3	FSM	ENSG00000169116.11	ENST00000513238.5	4308	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	43	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCTGTGGGTGATTCAC	74932051	True	NA	16	True	ATTAAA	-18	NA	74933094	75050115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_74933371_75033882_75033962_75046162
transcript_154503.nnic	chr4	-	755	3	NNC	ENSG00000260265.1	novel	785	2	NA	NA	-42555	0	at_least_one_novel_splicesite	TRUE	canonical	3	13	junction_2	19.5	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGACTGGCATCTGTATA	-75126582	True	NA	-2	True	AATAAA	-35	NA	75127272	75081924	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_75082358_75084588_75084704_75127065
transcript_154504.nnic	chr4	-	635	3	NNC	ENSG00000260265.1	novel	785	2	NA	NA	-42501	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	20	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGACTGGCATCTGTATA	-75126528	True	NA	-2	True	AATAAA	-35	NA	75127218	75081924	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_75082358_75084588_75084704_75127131
transcript_154507.known	chr4	-	4408	9	FSM	ENSG00000163743.14	ENST00000324439.10	4408	9	0	0	0	0	multi-exon	FALSE	canonical	3	586	junction_5	18.0792526117647	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGTACCCTTTGATCA	-75506525	True	NA	NA	False	AGTAAA	-24	NA	75514403	75479032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_75482667_75490580_75490702_75491610_75491638_75491723_75491783_75491888_75491934_75494100_75494180_75508819_75508936_75509176_75509297_75514196
transcript_154508.known	chr4	-	1011	9	FSM	ENSG00000163743.14	ENST00000512706.5	1011	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_8	197.521359604474	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAATCATATTACAAGTA	-75506552	True	NA	NA	False	NA	NA	NA	75514430	75482412	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_75482667_75490580_75490702_75491610_75491638_75491723_75491783_75491888_75491934_75494100_75494180_75508819_75508936_75509176_75509297_75514240
transcript_154509.known	chr4	-	1304	9	FSM	ENSG00000163743.14	ENST00000505105.5	1304	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	202.854897340439	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTATAGAAAGTTTTTT	-75506434	True	NA	-10	True	AATAAA	-14	NA	75514312	75482007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_75482667_75490580_75490664_75491610_75491638_75491723_75491783_75491888_75491934_75494100_75494180_75508819_75508936_75509176_75509297_75514196
transcript_154510.known	chr4	-	1123	9	FSM	ENSG00000163743.14	ENST00000504085.5	1123	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	262.217347824281	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCACTGTGCTTGTGTT	-75506525	True	NA	NA	False	NA	NA	NA	75514403	75482341	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_75482667_75490580_75490702_75491582_75491638_75491723_75491783_75491888_75491934_75494100_75494180_75508823_75508936_75509176_75509297_75514196
transcript_154512.known	chr4	-	728	9	FSM	ENSG00000163743.14	ENST00000513909.5	728	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	259.979055646796	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATTTGTGAATCCTATAA	-75514164	False	NA	NA	False	NA	NA	NA	75514256	75482603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_75482667_75490580_75490702_75491610_75491638_75491723_75491783_75491888_75491934_75494100_75494180_75508823_75508936_75509176_75509297_75514154
transcript_154523.known	chr4	+	3549	5	FSM	ENSG00000174796.12	ENST00000311638.7	3549	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	5.76085931090146	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTATGTGGTTTTATAC	75513454	True	NA	NA	False	AATAAA	-17	NA	75514472	75530026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_75514521_75515432_75515533_75516771_75516980_75521735_75521862_75526959
transcript_154526.known	chr4	+	1161	5	FSM	ENSG00000174796.12	ENST00000514480.1	1161	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	22.0454076850486	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTTCATGTTACGTTC	75513501	False	NA	NA	False	NA	NA	NA	75514519	75527214	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_75514992_75515432_75515533_75516771_75516980_75521735_75521862_75526959
transcript_154527.known	chr4	+	655	4	FSM	ENSG00000174796.12	ENST00000503831.1	655	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	6.64997911442	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTACATATGTAGTTCACT	75513470	True	NA	NA	False	AATAGA	-16	NA	75514488	75522050	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_75514521_75515432_75515533_75516771_75516980_75521735
transcript_154528.known	chr4	+	3423	4	FSM	ENSG00000174796.12	ENST00000380837.7	3423	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	26.4112770527204	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTATGTGGTTTTATAC	75513454	True	NA	NA	False	AATAAA	-17	NA	75514472	75530026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_75514521_75515432_75515533_75516771_75516980_75526959
transcript_154532.known	chr4	+	4135	26	FSM	ENSG00000138768.15	ENST00000264904.8	4135	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	373.874130691066	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGAGGCGACTTTTCTTA	75706551	True	NA	18	True	AATAAA	-19	NA	75724597	75814286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_75724886_75752372_75752460_75752539_75752605_75757496_75757574_75760593_75760606_75770438_75770540_75770821_75770925_75771081_75771138_75774675_75774797_75782679_75782859_75787061_75787203_75790149_75790239_75790642_75790798_75793689_75793902_75795335_75795357_75799621_75799733_75800350_75800470_75800617_75800800_75801078_75801201_75804133_75804273_75805139_75805304_75806485_75806573_75808952_75809052_75810431_75810540_75812159_75812376_75813205
transcript_154535.known	chr4	+	4123	24	FSM	ENSG00000138768.15	ENST00000514213.7	4123	24	0	0	0	0	multi-exon	FALSE	canonical	3	741	junction_5	157.630673130363	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGAGGCGACTTTTCTTA	75706530	True	NA	18	True	AATAAA	-19	NA	75724576	75814286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_75724886_75752372_75752460_75752539_75752605_75757496_75757574_75770438_75770540_75770821_75770925_75771081_75771138_75774675_75774797_75782679_75782859_75787061_75787203_75790149_75790239_75790642_75790798_75793689_75793902_75799621_75799733_75800350_75800470_75800617_75800800_75801078_75801201_75804133_75804273_75805139_75805304_75806485_75806573_75808952_75809052_75810431_75810540_75812159_75812376_75813205
transcript_15454.known	chr1	-	895	6	FSM	ENSG00000163479.14	ENST00000480567.5	895	6	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_5	721.592849188516	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGAGCCTCCTTGGTTCCA	-155997658	True	NA	NA	False	NA	NA	NA	156020889	156009359	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156009651_156011809_156011888_156014960_156015070_156018269_156018369_156020012_156020168_156020726
transcript_154545.nic	chr4	+	2218	17	ISM	ENSG00000138768.15	ENST00000514213.7	4123	24	-64	13161	-64	-5430	5prime_fragment	TRUE	canonical	3	741	junction_5	123.996960018179	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAGGTGAAAAAAAC	NA	False	NA	31	True	GATAAA	-4	NA	75724512	75801125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_75724886_75752372_75752460_75752539_75752605_75757496_75757574_75770438_75770540_75770821_75770925_75771081_75771138_75774675_75774797_75782679_75782859_75787061_75787203_75790149_75790239_75790642_75790798_75793689_75793902_75799621_75799733_75800350_75800470_75800617_75800800_75801078
transcript_15455.known	chr1	-	1008	6	FSM	ENSG00000163479.14	ENST00000532074.5	1008	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	711.703477580376	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTCTATTCTGGGTTAGA	-155997683	True	NA	-68	True	AATGAA	-27	NA	156020914	156009114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156009651_156011809_156011888_156014960_156015074_156018269_156018369_156020012_156020168_156020887
transcript_154552.known	chr4	-	5456	14	FSM	ENSG00000138757.15	ENST00000677620.1	5456	14	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_12	993.948035978165	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-75715809	True	NA	NA	False	NA	NA	NA	75724424	75641848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75653982_75654082_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75694797_75694930_75724055_75724177_75724275
transcript_154553.known	chr4	-	5398	13	FSM	ENSG00000138757.15	ENST00000677265.1	5398	13	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_11	893.406258683896	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-75715850	True	NA	NA	False	NA	NA	NA	75724465	75641848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75694797_75694930_75724055_75724177_75724275
transcript_154555.known	chr4	-	5367	13	FSM	ENSG00000138757.15	ENST00000678971.1	5367	13	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_12	962.05040004265	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-75715841	True	NA	NA	False	NA	NA	NA	75724456	75641848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75653982_75654082_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75694797_75694930_75724275
transcript_154556.known	chr4	-	5385	13	FSM	ENSG00000138757.15	ENST00000678100.1	5385	13	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_12	940.450143400607	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-75715870	True	NA	NA	False	NA	NA	NA	75724485	75641848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75653982_75654082_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75724055_75724177_75724275
transcript_154557.known	chr4	-	4217	12	FSM	ENSG00000138757.15	ENST00000395719.7	4217	12	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_11	891.321537182081	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTCCCTAATTTAATC	-75672878	False	34593	-16	True	AATAAA	-23	NA	75673114	75642781	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75653982_75654082_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75673018
transcript_154558.known	chr4	-	4321	12	FSM	ENSG00000138757.15	ENST00000359707.9	4321	12	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_5	760.758983781959	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTATGTCCCTAATTT	-75638818	True	NA	-20	True	AATAAA	-19	NA	75673411	75642785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75653982_75654082_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75673207
transcript_154559.known	chr4	-	5327	12	FSM	ENSG00000138757.15	ENST00000678062.1	5327	12	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_5	864.993679812577	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-75724454	False	NA	NA	False	NA	NA	NA	75724548	75641848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75653982_75654082_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75724275
transcript_154561.known	chr4	-	5189	12	FSM	ENSG00000138757.15	ENST00000677583.1	5189	12	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_11	805.250866921412	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-75715762	True	NA	NA	False	NA	NA	NA	75724377	75641848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75694797_75694930_75724275
transcript_154562.known	chr4	-	5390	12	FSM	ENSG00000138757.15	ENST00000676666.1	5390	12	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_11	771.367734493855	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-75724495	False	NA	NA	False	NA	NA	NA	75724589	75641848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75724055_75724177_75724275
transcript_15457.known	chr1	-	1040	5	FSM	ENSG00000163479.14	ENST00000480176.5	1040	5	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	741.905148924039	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGAGGATACCCAGTGTC	-155997704	True	NA	-82	True	AATGAA	-13	NA	156020935	156009128	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156009651_156011809_156011888_156018131_156018369_156020012_156020168_156020887
transcript_154576.known	chr4	-	5110	11	FSM	ENSG00000138757.15	ENST00000677876.1	5110	11	0	0	0	0	multi-exon	FALSE	canonical	1	29	junction_10	648.026766422499	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-75672731	False	NA	NA	False	NA	NA	NA	75672967	75641848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75672812
transcript_154577.known	chr4	-	5142	11	FSM	ENSG00000138757.15	ENST00000678552.1	5142	11	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_10	618.109868874458	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-75672969	False	NA	NA	False	NA	NA	NA	75673205	75641848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75673018
transcript_154578.known	chr4	-	2609	11	FSM	ENSG00000138757.15	ENST00000357854.7	2609	11	0	0	0	0	multi-exon	FALSE	canonical	3	1778	junction_4	192.258263801585	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACTAGCATATTATTTAT	-75638808	True	NA	-30	True	AGTAAA	-2	NA	75673401	75644388	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75673207
transcript_154579.known	chr4	-	2592	11	FSM	ENSG00000138757.15	ENST00000677125.1	2592	11	0	0	0	0	multi-exon	FALSE	canonical	2	66	junction_10	637.369155199716	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATCTTGTTCTTCAGT	NA	False	NA	-17	True	AGTAAA	-15	NA	75673614	75644375	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75673450
transcript_154580.known	chr4	-	5155	11	FSM	ENSG00000138757.15	ENST00000678122.1	5155	11	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_10	565.804241765648	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-75715860	True	NA	NA	False	NA	NA	NA	75724475	75641848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75724275
transcript_15459.known	chr1	-	825	4	FSM	ENSG00000163479.14	ENST00000496742.5	825	4	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	779.457931300123	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGTTAGAGAAGTGCTTA	-155997702	True	NA	-58	True	AATGAA	-37	NA	156020933	156009104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156009651_156011809_156011888_156020012_156020168_156020887
transcript_154593.known	chr4	-	4880	9	FSM	ENSG00000138757.15	ENST00000677003.1	4880	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	696.877399099009	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-75638804	True	NA	NA	False	NA	NA	NA	75673397	75641848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75658842_75658925_75661930_75662050_75673207
transcript_154599.nic	chr4	-	882	6	ISM	ENSG00000138757.15	ENST00000357854.7	2609	11	-194	11454	19	0	5prime_fragment	FALSE	canonical	3	1876	junction_5	167.904020202019	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGAAAGACAACCATCTC	-75673359	True	NA	NA	False	NA	NA	NA	75673595	75655842	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75673207
transcript_154605.nic	chr4	-	678	5	ISM	ENSG00000138757.15	ENST00000357854.7	2609	11	-18	12535	-2	0	5prime_fragment	FALSE	canonical	3	1876	junction_4	179.413628244902	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGGTTACTTTGAAGATA	-75638826	True	NA	0	True	NA	NA	NA	75673419	75656923	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75673207
transcript_154619.known	chr4	-	3003	22	FSM	ENSG00000198301.12	ENST00000356260.10	3003	22	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_12	33.8689618377021	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTACCTTTGTATGTGGAGT	-75986641	True	NA	-10	True	AATAAA	-20	NA	75990945	75949914	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_75950798_75955974_75956137_75957324_75957410_75957517_75957709_75957846_75957942_75960065_75960193_75961027_75961105_75961210_75961309_75964134_75964212_75965763_75965823_75967276_75967335_75969295_75969400_75970308_75970379_75971356_75971459_75973316_75973392_75974075_75974134_75975743_75975845_75975923_75975996_75977645_75977757_75981371_75981471_75981932_75982038_75990751
transcript_154621.known	chr4	-	3080	22	FSM	ENSG00000198301.12	ENST00000395710.5	3080	22	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_20	85.8056920026017	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGGAGTGGTGTGTGG	-75986634	True	NA	-1	True	AATAAA	-29	NA	75990938	75949905	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_75950798_75955974_75956137_75957324_75957410_75957517_75957709_75957846_75957942_75960065_75960193_75961027_75961105_75961210_75961309_75964134_75964212_75965763_75965823_75967276_75967335_75969295_75969400_75970308_75970379_75971356_75971459_75973316_75973392_75974075_75974134_75975743_75975845_75975923_75975996_75977645_75977757_75981371_75981546_75981932_75982038_75990751
transcript_154628.nic	chr4	-	2060	21	ISM	ENSG00000198301.12	ENST00000356260.10	3003	22	-15	6135	2	4072	5prime_fragment	FALSE	canonical	3	352	junction_11	33.5059323105626	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAGAACTTTATGATGAT	-75986656	True	NA	NA	False	AATAAA	-13	NA	75990960	75956049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_75956137_75957324_75957410_75957517_75957709_75957846_75957942_75960065_75960193_75961027_75961105_75961210_75961309_75964134_75964212_75965763_75965823_75967276_75967335_75969295_75969400_75970308_75970379_75971356_75971459_75973316_75973392_75974075_75974134_75975743_75975845_75975923_75975996_75977645_75977757_75981371_75981471_75981932_75982038_75990751
transcript_154635.known	chr4	-	1859	11	FSM	ENSG00000138744.16	ENST00000286733.9	1859	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	9.45991543302581	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGCGTTATGCTCTCCCT	-75940573	True	NA	NA	False	AATAAA	-16	NA	75941013	75913659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_75914339_75914867_75914986_75918760_75918790_75919908_75919976_75920737_75920801_75920950_75921124_75925734_75925812_75931213_75931305_75936108_75936236_75940000_75940166_75940743
transcript_154639.known	chr4	-	1300	9	FSM	ENSG00000138744.16	ENST00000507956.5	1300	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	13.9726294948374	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACTAATTAGTCAGTAT	-75940533	True	NA	NA	False	AAAAAG	-5	NA	75940973	75917466	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_75917774_75919908_75919976_75920737_75920801_75920950_75921124_75925734_75925812_75931213_75931305_75936108_75936236_75940000_75940166_75940743
transcript_154644.nic	chr4	-	904	9	ISM	ENSG00000198301.12	ENST00000356260.10	3003	22	-15	21470	2	0	5prime_fragment	FALSE	canonical	3	368	junction_8	28.0064166754692	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTGGAAAAGGCAATGAAAG	-75986656	True	NA	-28	True	AAGAAA	-21	NA	75990960	75971384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_75971459_75973316_75973392_75974075_75974134_75975743_75975845_75975923_75975996_75977645_75977757_75981371_75981471_75981932_75982038_75990751
transcript_154647.nic	chr4	-	979	9	ISM	ENSG00000198301.12	ENST00000395710.5	3080	22	-22	21479	2	0	5prime_fragment	FALSE	canonical	3	36	junction_7	130.065788641749	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTGGAAAAGGCAATGAAAG	-75986656	True	NA	-28	True	AAGAAA	-21	NA	75990960	75971384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_75971459_75973316_75973392_75974075_75974134_75975743_75975845_75975923_75975996_75977645_75977757_75981371_75981546_75981932_75982038_75990751
transcript_154665.known	chr4	-	2249	12	FSM	ENSG00000138750.15	ENST00000264883.8	2249	12	0	0	0	0	multi-exon	FALSE	canonical	3	560	junction_11	47.4343391323798	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATTCTGTCTGGTGCTT	-76137487	True	NA	-5	True	AATAAA	-24	NA	76148397	76114663	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_76115495_76117663_76117775_76118074_76118195_76124648_76124757_76130655_76130750_76131229_76131285_76132522_76132720_76134174_76134363_76136185_76136413_76144148_76144293_76144389_76144474_76148307
transcript_154668.known	chr4	-	1563	11	FSM	ENSG00000138750.15	ENST00000514987.5	1563	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_9	184.565869000745	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGTCACCTCACAGCTC	-76137487	True	NA	NA	False	NA	NA	NA	76148397	76115205	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_76115495_76117663_76117775_76118074_76118195_76124648_76124757_76130655_76130750_76131229_76131285_76132522_76132720_76134174_76134363_76136185_76136413_76144389_76144474_76148307
transcript_154670.known	chr4	-	1385	11	FSM	ENSG00000138750.15	ENST00000512151.5	1385	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_8	185.366555775307	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAACCGACCACATGGA	-76137487	True	NA	NA	False	NA	NA	NA	76148397	76115300	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_76115495_76117663_76117775_76118074_76118195_76124648_76124757_76130655_76130750_76131229_76131285_76132522_76132720_76134174_76134363_76144148_76144293_76144389_76144474_76148307
transcript_154685.known	chr4	-	4471	12	FSM	ENSG00000138760.11	ENST00000639145.1	4471	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_10	64.4798642411876	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTAACCCCTATTGGGGTT	-76211170	True	NA	NA	False	NA	NA	NA	76213876	76159002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_76161752_76163224_76163384_76166249_76166302_76168402_76168477_76169866_76169986_76174143_76174314_76175790_76175911_76176436_76176529_76179516_76179706_76180953_76181093_76195706_76195865_76213426
transcript_15469.nnic	chr1	-	3473	11	NNC	ENSG00000160803.8	novel	3582	11	NA	NA	45	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_10	77.7591795224204	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTTGGCGTTTGTTTTT	-156053053	True	NA	NA	False	AATAAA	-23	NA	156053753	156035298	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_156037131_156041484_156041672_156041871_156041988_156042152_156042237_156042773_156042914_156043997_156044224_156048500_156048660_156050290_156050554_156051109_156051328_156051705_156051794_156053593
transcript_154690.known	chr4	+	1533	8	FSM	ENSG00000189157.14	ENST00000424749.7	1533	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	4.74234076362795	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTCTATTGCCTTTTTC	76251586	True	NA	NA	False	AATAAA	-23	NA	76251720	76283783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_76251821_76256177_76256524_76263703_76263844_76268659_76268769_76271567_76271769_76278068_76278225_76280263_76280342_76283380
transcript_154691.nic	chr4	+	1577	8	NIC	ENSG00000189157.14	novel	1533	8	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	3.29501788419166	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTACTCTATTGCCTTT	76251584	True	NA	NA	False	AATAAA	-20	NA	76251718	76283780	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_76251821_76256177_76256524_76263703_76263844_76268659_76268814_76271567_76271769_76278068_76278225_76280263_76280342_76283380
transcript_154693.known	chr4	+	2244	2	FSM	ENSG00000118804.9	ENST00000237642.7	2244	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATGTCTGAATTATTTG	76306247	True	NA	11	True	AATAAA	-22	NA	76306732	76311130	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_76306990_76309143
transcript_154695.nic	chr4	+	6639	10	NIC	ENSG00000138771.16	novel	3766	4	NA	NA	-230	609	combination_of_known_junctions	FALSE	canonical	3	102	junction_1	30.6416967586149	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGTCACGTTGAGCGTGA	76686195	True	NA	23	True	AATGAA	-13	NA	76689340	76779786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_76689703_76710155_76710288_76730803_76730936_76738760_76741927_76749016_76749091_76754310_76755193_76756448_76756938_76759544_76759696_76770625_76770899_76778808
transcript_15470.known	chr1	-	3582	11	FSM	ENSG00000160803.8	ENST00000368309.4	3582	11	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_4	20.5951450589696	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTTGGCGTTTGTTTTT	-156053098	True	NA	NA	False	AATAAA	-23	NA	156053798	156035298	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156037131_156041484_156041672_156041871_156041988_156042152_156042237_156042773_156042914_156043997_156044224_156048500_156048660_156050290_156050554_156051109_156051328_156051705_156051858_156053593
transcript_154702.known	chr4	-	3993	1	FSM	ENSG00000186212.4	ENST00000334306.4	3993	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGCTGATTACTGTTTT	-76897995	True	NA	-29	True	ATTAAA	-30	NA	76898144	76894151	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_76894200_76898100
transcript_154707.known	chr4	+	5545	10	FSM	ENSG00000138758.12	ENST00000264893.11	5545	10	0	0	0	0	multi-exon	FALSE	canonical	3	580	junction_8	36.6272515424725	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGCCCTTTTTTGTG	76934994	True	NA	21	True	CATAAA	-33	NA	76949751	77038615	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_76949931_76996424_76996540_77005600_77005797_77011734_77011922_77014855_77015018_77019164_77019262_77020501_77020671_77028628_77028762_77030782_77030971_77034496
transcript_154715.known	chr4	+	2615	9	FSM	ENSG00000138758.12	ENST00000502584.5	2615	9	0	0	0	0	multi-exon	FALSE	canonical	3	580	junction_8	34.5570181005248	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACTGAGAGAGTTTTAAA	76934993	True	NA	NA	False	AATAAA	-19	NA	76949750	77032158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_76949931_76996424_76996540_77005600_77005797_77011734_77011922_77014855_77015018_77019164_77019262_77020501_77020671_77028628_77028762_77030782
transcript_154717.nic	chr4	+	1279	8	ISM	ENSG00000138758.12	ENST00000502584.5	2615	9	-105	3462	-105	-2140	5prime_fragment	FALSE	canonical	3	588	junction_2	32.8664583068005	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGACAAATGTTTGTTATG	76949626	False	NA	NA	False	AAAAAG	-42	NA	76949645	77028696	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_76949931_76996424_76996540_77005600_77005797_77011734_77011922_77014855_77015018_77019164_77019262_77020501_77020671_77028628
transcript_154722.known	chr4	-	2759	7	FSM	ENSG00000118816.11	ENST00000237654.9	2759	7	0	0	0	0	multi-exon	FALSE	canonical	3	772	junction_5	77.8640196467891	719	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTTTTGTGACTTTT	-77065706	True	NA	-5	True	AATAAA	-14	NA	77075989	77047154	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_77048663_77055149_77055381_77055961_77056103_77056248_77056324_77058506_77058636_77066248_77066406_77075471
transcript_154755.known	chr4	+	5471	8	FSM	ENSG00000138764.15	ENST00000316355.10	5471	8	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_7	13.6381816969859	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGCTGGTTATATGCTTCC	77155796	True	NA	2	True	AATAAA	-20	NA	77157206	77170060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_77157507_77158532_77158671_77159366_77159505_77160720_77160972_77161479_77161559_77161648_77161748_77164273_77164480_77165800
transcript_154760.known	chr4	-	1890	12	FSM	ENSG00000138767.14	ENST00000512485.6	1890	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_11	3.44496278572662	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACAAAATTTTAATTTAAC	-77818519	False	NA	NA	False	NA	NA	NA	77819615	77720229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_77720644_77726166_77726370_77728853_77729082_77731386_77731539_77742140_77742296_77744717_77744876_77748315_77748385_77756861_77756952_77773080_77773167_77774529_77774717_77776270_77776393_77819589
transcript_154761.nic	chr4	-	1351	7	ISM	ENSG00000138767.14	ENST00000512485.6	1890	12	-665	24540	-665	-2567	5prime_fragment	FALSE	canonical	3	10	junction_6	2.96741563579414	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAATTATGGAAGAAATTG	-77819184	True	NA	NA	False	ATTAAA	-19	NA	77820280	77744769	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_77744876_77748315_77748385_77756861_77756952_77773080_77773167_77774529_77774717_77776270_77776393_77819589
transcript_154765.known	chr4	+	1175	9	FSM	ENSG00000169288.18	ENST00000315567.13	1175	9	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_1	39.4158518238538	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTTTTAGACCCTGTG	77857235	True	NA	17	True	AATAAA	-19	NA	77862829	77952785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_77862880_77871743_77871856_77883241_77883501_77885255_77885340_77887219_77887292_77894138_77894251_77909265_77909373_77949796_77949879_77952488
transcript_154766.nic	chr4	+	1269	9	NIC	ENSG00000169288.18	novel	1175	9	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	23	junction_1	124.356279998237	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTTTTAGACCCTGTG	77857275	True	NA	17	True	AATAAA	-19	NA	77862869	77952785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_77863014_77871743_77871856_77883241_77883501_77885255_77885340_77887219_77887292_77894138_77894251_77909265_77909373_77949796_77949879_77952488
transcript_154768.nic	chr4	+	1220	6	ISM	ENSG00000169288.18	ENST00000315567.13	1175	9	-574	58578	-574	8889	5prime_fragment	FALSE	canonical	3	325	junction_1	36.8097813087772	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAGGAAGAAACTGAATAA	NA	False	NA	NA	False	NA	NA	NA	77862255	77894207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_77862880_77871743_77871856_77883241_77883501_77885255_77885340_77887219_77887292_77894138
transcript_154770.known	chr4	+	580	4	FSM	ENSG00000169288.18	ENST00000511521.1	580	4	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_1	177.005335763894	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTGCTGTATTTACAGA	77857273	True	NA	NA	False	NA	NA	NA	77862867	77885318	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_77863014_77871743_77871856_77883241_77883501_77885255
transcript_154775.nnic	chr4	+	3881	21	NNC	ENSG00000138759.20	novel	7217	42	NA	NA	-348	17152	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_20	11.710999103407	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGGGCTACCTTGTAAT	78056652	True	NA	20	True	AATAAA	-32	NA	78056974	78355189	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_+_78058086_78065984_78066017_78237509_78237618_78245232_78245326_78252391_78252552_78255241_78255376_78265024_78265109_78266833_78266936_78267240_78267433_78278654_78278745_78281397_78281434_78282819_78282968_78284404_78284549_78286404_78286540_78308065_78308210_78315593_78315735_78317367_78317509_78318809_78318987_78333271_78333413_78337673_78337818_78354765
transcript_154779.known	chr4	+	2871	19	FSM	ENSG00000138759.20	ENST00000502446.6	2871	19	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_18	13.4794081637305	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAAACCCAATTGCCTTTT	78057453	False	NA	NA	False	ATTAAA	-24	NA	78057569	78319653	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_78058086_78065984_78066017_78237509_78237618_78245232_78245326_78252391_78252552_78255241_78255376_78265024_78265109_78266833_78266936_78267240_78267433_78278654_78278745_78281397_78281434_78282819_78282968_78284404_78284549_78286404_78286540_78308065_78308210_78315593_78315735_78317367_78317509_78318809_78318987_78319359
transcript_154782.known	chr4	+	1905	12	FSM	ENSG00000138759.20	ENST00000683711.1	1905	12	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	6.62452243717697	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCCATTGTTCAAAATAT	78056378	False	NA	NA	False	NA	NA	NA	78057689	78283297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_78058086_78065984_78066017_78237509_78237618_78245232_78245326_78252391_78252552_78255241_78255376_78265024_78265109_78266833_78266936_78267240_78267433_78278654_78278745_78281397_78281434_78282819
transcript_154783.nic	chr4	+	1343	4	ISM	ENSG00000138759.20	ENST00000683711.1	1905	12	-722	37980	-355	-37980	5prime_fragment	FALSE	canonical	3	29	junction_3	6.84754619472471	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGAGGTAAGTGTTTTC	78056645	True	NA	NA	False	AAGAAA	-2	NA	78056967	78245317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_78058086_78065984_78066017_78237509_78237618_78245232
transcript_154786.known	chr4	+	1432	13	FSM	ENSG00000138772.13	ENST00000264908.11	1432	13	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_9	20.637748585218	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATTTCTTTGTTTGCTTT	78550092	True	NA	25	True	AATAAA	-21	NA	78551769	78610447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_78551860_78554435_78554489_78573179_78573268_78579026_78579122_78582176_78582291_78586259_78586351_78591543_78591624_78595380_78595438_78595793_78595888_78597318_78597415_78601509_78601569_78604276_78604400_78610055
transcript_154791.known	chr4	+	1335	12	FSM	ENSG00000138772.13	ENST00000512884.5	1335	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	59.7009074228143	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGATAATAAAAATTGTTG	78550069	True	NA	-7	True	ATTAAA	-8	NA	78551746	78610415	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_78551860_78554435_78554489_78579026_78579122_78582176_78582291_78586259_78586351_78591543_78591624_78595380_78595438_78595793_78595888_78597318_78597415_78601509_78601569_78604276_78604400_78610055
transcript_154794.known	chr4	+	8012	16	FSM	ENSG00000138756.19	ENST00000502613.3	8012	16	0	0	0	0	multi-exon	TRUE	canonical	1	10	junction_15	18.9260549390399	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGACTTTGGAGTTTTT	78775105	True	NA	22	True	AATAAA	-29	NA	78776349	78916365	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_78776722_78826036_78826156_78833581_78833688_78842384_78842528_78844927_78845050_78847187_78847270_78850923_78851057_78859583_78859688_78861388_78861469_78865556_78865721_78870782_78871061_78871849_78871949_78872613_78872799_78878733_78878892_78887173_78887285_78910609
transcript_154795.known	chr4	+	3195	14	FSM	ENSG00000138756.19	ENST00000502871.5	3195	14	0	0	0	0	multi-exon	FALSE	canonical	2	45	junction_13	9.87975037415528	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACATGTTACTAAAACAAT	78775133	True	NA	NA	False	AATAAA	-20	NA	78776377	78879969	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_78776722_78826036_78826156_78833581_78833688_78842384_78842528_78844927_78845050_78847187_78847270_78850923_78851057_78859583_78859688_78861388_78861469_78865556_78865721_78870782_78871061_78871849_78871949_78872613_78872799_78878733
transcript_154798.known	chr4	-	9811	6	FSM	ENSG00000163291.14	ENST00000512733.5	9811	6	0	0	0	0	multi-exon	TRUE	canonical	3	229	junction_4	39.5201214573032	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGTAGTGAATTTTGTC	-78936698	True	NA	NA	False	AATACA	-18	NA	78939438	78911877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_78920682_78923856_78923948_78926520_78926719_78930169_78930326_78935120_78935284_78939039
transcript_154804.nnic	chr4	-	1493	2	Antisense	novelGene_ENSG00000250334.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAATGCAATTTGTTTACT	-79559351	False	NA	-3	True	CATAAA	-23	NA	79559364	79539919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr4_-_79541160_79559111
transcript_154806.nnic	chr4	-	698	2	Antisense	novelGene_ENSG00000250334.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCGAAGCCTGTGTCTAG	-79559351	False	NA	-8	True	ATTAAA	-16	NA	79559364	79540714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr4_-_79541160_79559111
transcript_154809.known	chr4	-	8419	17	FSM	ENSG00000163297.18	ENST00000403729.7	8419	17	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_14	4.97454457714473	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGTTCTGAAAGTCTCTG	NA	False	NA	NA	False	AATAAA	-31	NA	80073229	79901145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_79907468_79977620_79977702_79978006_79978175_79983877_79983971_79984818_79984864_80008520_80008617_80018897_80018977_80031622_80031693_80033471_80033571_80035971_80036033_80054271_80054353_80055149_80055219_80055359_80055468_80055931_80056014_80069435_80069508_80071582_80071655_80072408
transcript_154810.known	chr4	-	1473	16	FSM	ENSG00000163297.18	ENST00000307333.7	1473	16	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_13	4.72534537244516	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGTATAATGGAGGCAGG	-80072504	False	NA	NA	False	NA	NA	NA	80072563	79977578	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_79977702_79978006_79978175_79983877_79983971_79984818_79984864_80008520_80008617_80018897_80018977_80031622_80031693_80033471_80033571_80035971_80036033_80054271_80054353_80055149_80055219_80055359_80055468_80055931_80056014_80069435_80069508_80071582_80071655_80072408
transcript_154811.known	chr4	-	932	2	FSM	ENSG00000163297.18	ENST00000482406.1	932	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTTTTCGAAGACACCT	-79964853	True	NA	NA	False	NA	NA	NA	79964890	79906761	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_79907468_79964664
transcript_154812.known	chr4	-	1640	14	FSM	ENSG00000138669.10	ENST00000509474.5	1640	14	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_8	4.62435026621204	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAAAAGAAATTCCTGCAC	-81154029	True	NA	NA	False	NA	NA	NA	81154253	81089596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_81089804_81092385_81092453_81104369_81104433_81105812_81105936_81110447_81110612_81135154_81135297_81137392_81137483_81140532_81140670_81142793_81142948_81144231_81144331_81148883_81148953_81151959_81152055_81153643_81153722_81154101
transcript_154815.known	chr4	-	2941	14	FSM	ENSG00000138670.19	ENST00000264400.7	2941	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_10	6.6332495807108	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGGCGTCTTTCTTTTC	-81471588	True	NA	1	True	AATATA	-22	NA	81471907	81426392	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_81427793_81432298_81432372_81433839_81433964_81434638_81434735_81440833_81440930_81442296_81442377_81445525_81445629_81445742_81445839_81447503_81447579_81448068_81448285_81456650_81456789_81457498_81457622_81459331_81459515_81471769
transcript_154821.known	chr4	-	1667	8	FSM	ENSG00000138668.19	ENST00000352301.8	1667	8	0	0	0	0	multi-exon	FALSE	canonical	3	1681	junction_7	1967.99113362861	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	-82287574	True	NA	30	True	AATAAA	-12	NA	82373983	82353833	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82354155_82355303_82355402_82356536_82356684_82356795_82356896_82357312_82357445_82358658_82358821_82359470_82359640_82373445
transcript_154827.nic	chr4	-	1594	7	NIC	ENSG00000138668.19	novel	1585	8	NA	NA	-61	0	intron_retention	FALSE	canonical	3	1681	junction_6	2004.68814421484	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGGCTCTTTTATCAT	-82374002	False	NA	-29	True	AATAAA	-17	NA	82374052	82353828	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_82354155_82355303_82355402_82356795_82356896_82357312_82357445_82358658_82358821_82359470_82359640_82373445
transcript_154842.known	chr4	+	612	1	FSM	ENSG00000272677.2	ENST00000609552.1	612	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGAGTTTGTGTTCGGGTT	82374154	True	NA	15	True	TATAAA	-26	NA	82374300	82374912	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_82374300_82374900
transcript_154843.known	chr4	-	1585	8	FSM	ENSG00000138668.19	ENST00000353341.8	1585	8	0	0	0	0	multi-exon	FALSE	canonical	3	3696	junction_2	1211.89812328615	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGGCTCTTTTATCAT	-82287577	True	NA	-29	True	AATAAA	-17	NA	82373986	82353828	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82354155_82355303_82355402_82356795_82356896_82357312_82357445_82358658_82358821_82359470_82359640_82371527_82371585_82373445
transcript_154844.known	chr4	-	3068	9	FSM	ENSG00000138668.19	ENST00000313899.12	3068	9	0	0	0	0	multi-exon	FALSE	canonical	3	3310	junction_3	1351.33949749869	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGGTCTCCCTCTGTCGTT	-82287582	True	NA	-5	True	AATAAA	-18	NA	82373991	82352497	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82354155_82355303_82355402_82356536_82356684_82356795_82356896_82357312_82357445_82358658_82358821_82359470_82359640_82371527_82371585_82373445
transcript_154847.known	chr4	-	1433	10	FSM	ENSG00000152795.18	ENST00000630114.2	1433	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_9	1196.8167140016	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGCTTTTCTGCGTCAGG	-82429263	True	NA	-26	True	AATAAA	-14	NA	82430408	82424629	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82424884_82425562_82425668_82426036_82426130_82426462_82426634_82427189_82427305_82427432_82427565_82428017_82428180_82428277_82428447_82429247_82429413_82430341
transcript_154850.known	chr4	-	2356	9	FSM	ENSG00000152795.18	ENST00000502762.4	2356	9	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_2	1063.42782283284	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTTTTCTGCGTCAGGT	-82430382	False	NA	-25	True	AATAAA	-15	NA	82430401	82424628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82424884_82425562_82425668_82426036_82426130_82426462_82426634_82427189_82427305_82427432_82427565_82428017_82428180_82428277_82428447_82429247
transcript_154855.known	chr4	-	1318	9	FSM	ENSG00000152795.18	ENST00000630827.1	1318	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_8	897.887068344344	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGCTTTTCTGCGTCAG	-82430380	False	NA	26	True	AATAAA	-13	NA	82430399	82424630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82424884_82426036_82426130_82426462_82426634_82427189_82427305_82427432_82427565_82428017_82428180_82428277_82428447_82429247_82429413_82430341
transcript_154857.known	chr4	-	1291	8	FSM	ENSG00000152795.18	ENST00000602300.5	1291	8	0	0	0	0	multi-exon	FALSE	canonical	3	2208	junction_1	260.041676408586	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTTTTCTGCGTCAGGT	-82411294	True	NA	-25	True	AATAAA	-15	NA	82429441	82424628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82424884_82426036_82426130_82426462_82426634_82427189_82427305_82427432_82427565_82428017_82428180_82428277_82428447_82429247
transcript_154870.known	chr4	-	2404	7	FSM	ENSG00000152795.18	ENST00000507721.5	2404	7	0	0	0	0	multi-exon	FALSE	canonical	3	2423	junction_4	208.249583166183	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGCGTCAGGTACTA	-82411250	True	NA	-21	True	AATAAA	-19	NA	82429397	82424624	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82426130_82426462_82426634_82427189_82427305_82427432_82427565_82428017_82428180_82428277_82428447_82429247
transcript_154873.known	chr4	-	3968	7	FSM	ENSG00000152795.18	ENST00000614627.4	3968	7	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_2	883.696167620222	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGTGGATAAGCAGAGCTT	-82430206	False	NA	NA	False	ATTAAA	-23	NA	82430225	82422564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82424884_82426036_82426130_82427189_82427305_82427432_82427565_82428017_82428180_82428277_82428447_82429247
transcript_154882.known	chr4	+	2083	6	FSM	ENSG00000145293.17	ENST00000273920.8	2083	6	0	0	0	0	multi-exon	FALSE	canonical	3	533	junction_1	99.9391815055537	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGTATCATGTGTGTGTT	82419235	True	NA	14	True	AAAACA	-24	NA	82430589	82461177	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_82430914_82447919_82448022_82451042_82451246_82454721_82454855_82456914_82457039_82459980
transcript_154892.known	chr4	+	1874	6	FSM	ENSG00000145293.17	ENST00000509635.5	1874	6	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	236.86418049169	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTGTGATTAATAAAAGC	82419293	True	NA	-12	True	NA	NA	NA	82430647	82461055	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_82430885_82447919_82448022_82451042_82451246_82454721_82454855_82456914_82457039_82459980
transcript_154893.known	chr4	+	1689	5	FSM	ENSG00000145293.17	ENST00000505846.5	1689	5	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	342.399620326892	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTTTTATATAGGTTCC	82419307	True	NA	20	True	AATAAA	-16	NA	82430661	82461087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_82430885_82447919_82448022_82454721_82454855_82456914_82457039_82459980
transcript_154894.known	chr4	-	3178	8	FSM	ENSG00000249242.8	ENST00000449862.7	3178	8	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_2	2.74791200881019	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTATTTCTTTGTCTCTT	-82561865	True	NA	-5	True	AATAAA	-17	NA	82561988	82483175	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82485720_82490060_82490239_82496067_82496196_82502726_82502795_82502894_82502928_82503058_82503113_82504577_82504668_82561905
transcript_154896.known	chr4	-	3040	5	FSM	ENSG00000145284.12	ENST00000319540.9	3040	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	3.34477204006491	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTTCTTGTCCAGATA	-82798437	True	NA	-5	True	AATAAA	-15	NA	82798796	82629538	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82631518_82636590_82636824_82680706_82680913_82705282_82705414_82798305
transcript_154901.known	chr4	-	6121	13	FSM	ENSG00000189308.11	ENST00000340417.8	6121	13	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_12	15.5534472777652	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTGACAGCATTTAAGA	-83009401	False	1422	NA	False	ATTAAA	-22	NA	83010823	82924602	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82928304_82930942_82931146_82935980_82936119_82936278_82936382_82937226_82937299_82938412_82938505_82939538_82939737_82939888_82939963_82946257_82946475_82970326_82970470_82978882_82979007_82984160_82984877_83010483
transcript_154902.known	chr4	-	2742	13	FSM	ENSG00000189308.11	ENST00000505397.1	2742	13	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_11	11.1738161192435	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGTTGTATGACTTTGT	-83011504	True	NA	NA	False	TATAAA	-20	NA	83012926	82927776	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82928304_82930942_82931146_82935980_82936119_82936278_82936382_82937226_82937299_82938412_82938505_82939538_82939737_82939888_82939963_82946257_82946475_82970326_82970470_82978882_82979007_82984160_82984877_83012791
transcript_154903.known	chr4	-	4254	13	FSM	ENSG00000189308.11	ENST00000442461.6	4254	13	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_11	18.677638144762	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTGCATTTTTTCTTTA	-83009309	False	NA	NA	False	AATAAA	-24	NA	83010731	82925714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82928304_82930942_82931146_82935980_82936119_82936278_82936382_82937226_82937299_82938412_82938505_82939538_82939737_82939888_82939963_82946257_82946475_82970326_82970470_82978882_82979007_82984823_82984877_83010483
transcript_154904.known	chr4	-	2257	13	FSM	ENSG00000189308.11	ENST00000510557.5	2257	13	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_11	15.4782553567542	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAATGTCAGAAGGGGAAA	-83011465	True	NA	NA	False	NA	NA	NA	83012887	82927559	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82928304_82930942_82931146_82935980_82936119_82936278_82936382_82937226_82937299_82938412_82938505_82939538_82939737_82939888_82939963_82946257_82946475_82970326_82970470_82978882_82979007_82984823_82984877_83012791
transcript_15492.known	chr1	+	621	4	FSM	ENSG00000116586.12	ENST00000368305.9	621	4	0	0	0	0	multi-exon	FALSE	canonical	3	1443	junction_3	89.1827088372828	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTGGCTACTTTCTT	156044136	True	NA	37	True	AATAAA	-16	NA	156054781	156058506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156054958_156055262_156055426_156057977_156058068_156058314
transcript_154929.known	chr4	-	4255	27	FSM	ENSG00000138674.17	ENST00000448323.5	4255	27	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_26	173.839942026529	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTGTGTATAGTCT	-82891233	False	NA	-5	True	ATTAAA	-13	NA	82891266	82818661	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842139_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82861630_82861709_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881938_82891087
transcript_154934.known	chr4	-	3801	27	FSM	ENSG00000138674.17	ENST00000508502.5	3801	27	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_5	177.168341702955	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAAGACATGGACTAGTC	-82881010	True	NA	NA	False	AAGAAA	-18	NA	82891203	82819010	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842184_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82861630_82861709_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
transcript_15494.known	chr1	+	521	3	FSM	ENSG00000116586.12	ENST00000368304.9	521	3	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	744.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTGGCTACTTTCTT	156044146	True	NA	37	True	AATAAA	-16	NA	156054791	156058506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156054958_156055262_156055426_156058314
transcript_154943.nic	chr4	-	4179	26	NIC	ENSG00000138674.17	novel	4255	27	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_13	154.773403399938	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTGTGTATAGTCT	-82891232	False	NA	-5	True	ATTAAA	-13	NA	82891265	82818661	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842139_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
transcript_154953.known	chr4	-	3861	26	FSM	ENSG00000138674.17	ENST00000509142.5	3861	26	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	208.116298256528	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTGTGTATAGTCT	-82881021	True	NA	-5	True	ATTAAA	-13	NA	82891214	82818661	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82861630_82861709_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881938_82891087
transcript_154959.known	chr4	-	4012	25	FSM	ENSG00000138674.17	ENST00000348405.8	4012	25	0	0	0	0	multi-exon	TRUE	canonical	3	332	junction_13	101.334558312223	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTGTATAGTCTT	-82880943	True	NA	-4	True	ATTAAA	-14	NA	82891136	82818660	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842139_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
transcript_154961.known	chr4	-	3596	25	FSM	ENSG00000138674.17	ENST00000505984.5	3596	25	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_5	139.367613157513	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTTCCAAAGAAACATG	-82880955	True	NA	NA	False	NA	NA	NA	82891148	82819043	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842184_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
transcript_15497.known	chr1	+	623	3	FSM	ENSG00000116586.12	ENST00000487106.5	623	3	0	0	0	0	multi-exon	FALSE	canonical	3	1443	junction_2	107.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTGGCTACTTTCTT	156055068	False	NA	37	True	AATAAA	-16	NA	156055084	156058506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156055426_156057977_156058068_156058314
transcript_154978.known	chr4	-	3687	24	FSM	ENSG00000138674.17	ENST00000513858.5	3687	24	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	159.809574772715	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTGTATAGTCTT	-82880960	True	NA	-4	True	ATTAAA	-14	NA	82891153	82818660	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
transcript_15498.known	chr1	+	1100	5	FSM	ENSG00000132698.15	ENST00000361084.10	1100	5	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	32.4152741774615	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGTCATTCCACTGCC	156058158	True	NA	26	True	AATAAA	-16	NA	156061159	156070504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156061444_156065910_156066107_156068269_156068464_156069670_156069752_156070159
transcript_154983.known	chr4	-	3909	26	FSM	ENSG00000138674.17	ENST00000311785.11	3909	26	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	192.563066032923	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTGTGTATAGTCT	-82881066	True	NA	-5	True	ATTAAA	-13	NA	82891259	82818661	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82861630_82861709_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
transcript_154986.nic	chr4	-	3433	23	ISM	ENSG00000138674.17	ENST00000348405.8	4012	25	-129	5937	1	0	5prime_fragment	FALSE	canonical	3	332	junction_11	103.710111320366	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGATCTTATTCAGCGCT	-82891232	False	NA	NA	False	AAGAAA	-39	NA	82891265	82824597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_82824675_82827368_82827633_82828999_82829059_82842139_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
transcript_15499.known	chr1	+	681	4	FSM	ENSG00000132698.15	ENST00000473336.5	681	4	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	75.7246473892234	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGTCATTCCACTGCC	156058381	False	NA	26	True	AATAAA	-16	NA	156061382	156070504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156061444_156068269_156068464_156069670_156069752_156070159
transcript_154993.known	chr4	-	3397	21	FSM	ENSG00000138674.17	ENST00000508479.5	3397	21	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_8	163.05344982551	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAATAAAAATC	-82880960	True	NA	NA	False	TTTAAA	-4	NA	82891153	82843684	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82861630_82861709_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
transcript_154999.nic	chr4	-	3392	19	ISM	ENSG00000138674.17	ENST00000505984.5	3596	25	-117	24641	1	0	5prime_fragment	FALSE	canonical	3	332	junction_7	99.2888913757087	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAATAAAAATC	-82891232	False	NA	NA	False	TTTAAA	-4	NA	82891265	82843684	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
transcript_15500.known	chr1	+	868	3	FSM	ENSG00000132698.15	ENST00000487325.5	868	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	61	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGCATGGGCTCTAAATC	156058204	True	NA	NA	False	NA	NA	NA	156061205	156070106	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156061444_156068269_156068464_156069670
transcript_155013.known	chr4	-	1717	12	FSM	ENSG00000138674.17	ENST00000436790.6	1717	12	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_11	82.9622038806062	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTGGTTGCCAGCG	-82880991	True	NA	NA	False	AATAAA	-14	NA	82891184	82863210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
transcript_15502.known	chr1	-	664	3	FSM	ENSG00000254726.3	ENST00000442784.1	664	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	24.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAGGGCGGGGACTTTGG	-156080949	False	NA	NA	False	NA	NA	NA	156081704	156077065	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156077355_156077467_156077683_156081544
transcript_155033.known	chr4	+	3825	5	FSM	ENSG00000168152.13	ENST00000302236.10	3825	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	12.3592070943083	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGATGTTTGTTTATT	82899217	True	NA	9	True	ATTAAA	-18	NA	82900734	82919969	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_82900883_82904735_82904932_82906323_82906628_82907784_82907936_82916943
transcript_155037.known	chr4	-	2770	5	FSM	ENSG00000251022.6	ENST00000504520.6	2770	5	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_2	50.4876222454574	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAGTGAGCAATTCAGTT	-82900927	True	NA	NA	False	ATTAAA	-17	NA	82900960	82893008	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82894848_82895691_82895775_82897988_82898063_82900076_82900224_82900333
transcript_155043.known	chr4	-	516	4	FSM	ENSG00000251022.6	ENST00000511271.5	516	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	96.6413760019773	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAGAACAACACGAATTCT	-82896694	True	NA	NA	False	NA	NA	NA	82900566	82894794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82894848_82895691_82895775_82900076_82900224_82900333
transcript_155048.known	chr4	-	550	4	FSM	ENSG00000251022.6	ENST00000507660.5	550	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	86.2489935529041	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGATTGTCCAAGTAAAAAA	-82900538	False	NA	NA	False	TTTAAA	-44	NA	82900571	82897922	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82898063_82899712_82899738_82900076_82900224_82900333
transcript_155049.known	chr4	-	573	4	FSM	ENSG00000251022.6	ENST00000504718.5	573	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	10.2740233382816	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACAAATTATGCTGAGCT	-82896630	True	NA	NA	False	NA	NA	NA	82900502	82897792	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82898063_82899712_82899738_82900076_82900224_82900371
transcript_15505.known	chr1	-	6591	2	FSM	ENSG00000254726.3	ENST00000532414.3	6591	2	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCTGTCTTCGTTCTCTG	-156081710	True	NA	-21	True	ATTAAA	-45	NA	156082465	156072012	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156077683_156081544
transcript_155050.known	chr4	-	971	3	FSM	ENSG00000251022.6	ENST00000512932.5	971	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	109.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGTTAAAGCACAAGAGGA	-82896687	True	NA	NA	False	AAAACA	-29	NA	82900559	82894249	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82894848_82900076_82900224_82900333
transcript_155053.known	chr4	-	683	3	FSM	ENSG00000251022.6	ENST00000513581.5	683	3	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	59	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTCATTTTATTTTATT	-82896697	True	NA	NA	False	NA	NA	NA	82900569	82897762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_82898063_82900076_82900224_82900333
transcript_155055.known	chr4	+	1702	11	FSM	ENSG00000138663.9	ENST00000503682.5	1702	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	213.812183937212	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTACTTTGTTTTTAGTT	83029845	True	NA	14	True	AATAAA	-23	NA	83035206	83075797	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_83035299_83045625_83045706_83049165_83049318_83049880_83049985_83056925_83057080_83057257_83057409_83063075_83063247_83065059_83065156_83066437_83066554_83068437_83068523_83075296
transcript_155056.known	chr4	+	1695	11	FSM	ENSG00000138663.9	ENST00000511653.1	1695	11	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_10	211.520897312771	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGGTTATTCTAATAAAT	83029863	True	NA	-27	True	NA	NA	NA	83035224	83075756	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_83035299_83045625_83045706_83049165_83049318_83049880_83049985_83056925_83057080_83057257_83057409_83063075_83063247_83066437_83066554_83068437_83068523_83073205_83073354_83075296
transcript_155058.known	chr4	+	1651	10	FSM	ENSG00000138663.9	ENST00000264389.7	1651	10	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_9	53.6354866865098	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAAGAGTATTTTGTTCCC	83029821	True	NA	35	True	AATAAA	-44	NA	83035182	83075818	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_83035299_83045625_83045706_83049165_83049318_83049880_83049985_83056925_83057080_83057257_83057409_83063075_83063247_83066437_83066554_83068437_83068523_83075296
transcript_155061.known	chr4	-	786	5	FSM	ENSG00000145287.11	ENST00000411416.6	786	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	2.48746859276655	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTTCATGCTTCTTTGC	-83109741	True	NA	NA	False	TATAAA	-25	NA	83109843	83090687	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_83090972_83094677_83094792_83104895_83105021_83107803_83107951_83109727
transcript_155066.nnic	chr4	-	2776	7	NNC	ENSG00000173085.15	novel	1525	7	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	71.1422674801852	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGCCTTACTGTTCTTT	-83281916	True	NA	-7	True	AATAAA	-15	NA	83284790	83263823	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_83264364_83267585_83267775_83269859_83269994_83272086_83272173_83273495_83273618_83278947_83279115_83283252
transcript_155067.known	chr4	-	1639	7	FSM	ENSG00000173085.15	ENST00000311469.9	1639	7	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_5	16.9648329067974	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGGGCCTTACTGTTCT	NA	False	NA	-9	True	AATAAA	-13	NA	83284914	83263825	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_83264364_83267585_83267775_83269859_83269994_83272086_83272173_83273495_83273618_83278947_83279115_83284511
transcript_155071.known	chr4	-	4581	12	FSM	ENSG00000173083.16	ENST00000311412.10	4581	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	5.28212328957598	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTATGACTATTCTTTT	-83334580	True	NA	NA	False	AATAAA	-20	NA	83334848	83292460	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_83295504_83300959_83301107_83302149_83302269_83306202_83306318_83308844_83308952_83309401_83309496_83310030_83310079_83310721_83310891_83313113_83313288_83319343_83319470_83322218_83322365_83334555
transcript_155072.known	chr4	-	3543	18	FSM	ENSG00000163312.11	ENST00000295488.8	3543	18	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_12	9.96429612325095	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTACGAATAATGTTTGA	-83454004	True	NA	2	True	TATAAA	-30	NA	83455823	83407345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_83407561_83416730_83416866_83418092_83418207_83421562_83421737_83425993_83426093_83427562_83427721_83429523_83429747_83431663_83431769_83432125_83432268_83436857_83437098_83439862_83440009_83441304_83441404_83443516_83443615_83446013_83446087_83446834_83447036_83448782_83448962_83453230_83453946_83455396
transcript_155074.known	chr4	-	3315	17	FSM	ENSG00000163312.11	ENST00000510985.1	3315	17	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_14	10.5102256755029	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATACATTTCAGTTAT	-83454004	True	NA	-25	True	ATTAAA	-23	NA	83455823	83407372	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_83407561_83416730_83416866_83418092_83418207_83421562_83421737_83425993_83426093_83427562_83427721_83429523_83429747_83431663_83431769_83432125_83432268_83436857_83437098_83439862_83440009_83441304_83441404_83443516_83443615_83446013_83446087_83448782_83448962_83453230_83453946_83455396
transcript_155079.known	chr4	-	744	2	FSM	ENSG00000163312.11	ENST00000440639.2	744	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAACCTTACTGAATTACA	-83454004	True	NA	NA	False	AAAACA	-21	NA	83455823	83453756	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_83453946_83455268
transcript_155081.nic	chr4	-	1241	2	ISM	ENSG00000163312.11	ENST00000510985.1	3315	17	-58	45817	-26	530	5prime_fragment	FALSE	canonical	3	52	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACCATAATATTAGTGCAA	-83454062	True	NA	-7	True	AATAAA	-19	NA	83455881	83453189	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_83453946_83455396
transcript_155082.known	chr4	-	574	2	FSM	ENSG00000163312.11	ENST00000515482.1	574	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACCAGAGTGGATATGAA	-83454036	True	NA	NA	False	NA	NA	NA	83455855	83453719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_83453946_83455507
transcript_155085.known	chr4	-	4210	9	FSM	ENSG00000163322.14	ENST00000321945.12	4210	9	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_5	9.52627944162882	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCATTCAATGGTAAATC	-83481028	True	NA	-9	True	ATTAAA	-18	NA	83485100	83459516	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_83462903_83463493_83463609_83467453_83467539_83469031_83469152_83470202_83470397_83472221_83472289_83476642_83476680_83482153_83482245_83484985
transcript_155094.known	chr4	+	1550	6	FSM	ENSG00000163319.11	ENST00000295491.9	1550	6	0	0	0	0	multi-exon	FALSE	canonical	3	1627	junction_3	202.584895784459	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTTTGTGAAGTAAATGC	83438958	True	NA	6	True	AATAAA	-21	NA	83456057	83462298	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_83456178_83456908_83456959_83458345_83458430_83459739_83459798_83460972_83461033_83461120
transcript_155096.nic	chr4	+	343	5	ISM	ENSG00000163319.11	ENST00000295491.9	1550	6	-4	1299	-1	-236	5prime_fragment	FALSE	canonical	3	1627	junction_3	218.848692022594	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCACAAAAGCAATTAAGAGA	83438954	True	NA	NA	False	AAGAAA	-44	NA	83456053	83460999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_83456178_83456908_83456959_83458345_83458430_83459739_83459798_83460972
transcript_155097.known	chr4	+	490	5	FSM	ENSG00000163319.11	ENST00000505719.1	490	5	0	0	0	0	multi-exon	TRUE	canonical	3	79	junction_3	815.437765865673	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATGTCCATTAAGCAGAT	83438990	True	NA	-70	True	NA	NA	NA	83456089	83461328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_83456178_83456908_83456959_83458345_83458430_83460972_83461033_83461120
transcript_155098.known	chr4	+	666	5	FSM	ENSG00000163319.11	ENST00000507019.5	666	5	0	0	0	0	multi-exon	TRUE	canonical	3	372	junction_2	732.705389293678	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTGATCCCCAAATAGCT	83438883	True	NA	25	True	AATAAA	-26	NA	83455982	83461423	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_83456178_83456908_83456959_83459739_83459798_83460972_83461033_83461120
transcript_155103.known	chr4	+	350	4	FSM	ENSG00000163319.11	ENST00000507349.5	350	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	916.268277064941	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTTGTATGATGCCAATA	83438955	True	NA	29	True	AATAAA	-40	NA	83456054	83461237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_83456178_83456908_83456959_83460972_83461033_83461120
transcript_155107.known	chr4	-	3472	3	FSM	ENSG00000163623.10	ENST00000295886.5	3472	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCTGTTGCCTTGAATGAA	NA	False	NA	NA	False	ATTAAA	-17	NA	84499292	84491984	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_84493550_84495671_84495845_84497558
transcript_155109.known	chr4	+	4309	13	FSM	ENSG00000163624.6	ENST00000295887.6	4309	13	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_5	7.35224833337093	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTTTGTTGTGCCAT	84582859	True	NA	14	True	AATAAA	-17	NA	84583126	84651334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_84583519_84604242_84604371_84609428_84609526_84617563_84617662_84619393_84619534_84631818_84631878_84633856_84633940_84635263_84635352_84638923_84638993_84640837_84640991_84643023_84643144_84645221_84645326_84648556
transcript_155118.known	chr4	+	2740	8	FSM	ENSG00000138639.18	ENST00000395183.6	2740	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.67819144635296	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGGCTGTGCTGTTTG	85778639	True	NA	NA	False	ATTAAA	-13	NA	85778705	86001223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_85778966_85923647_85923771_85942065_85942274_85972035_85972169_85974887_85974962_85977569_85977692_85994582_85995658_86000478
transcript_155120.known	chr4	-	3070	14	FSM	ENSG00000109339.24	ENST00000641170.1	3070	14	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_1	3.24356440650893	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGAGCCTGCCTAGAC	NA	False	NA	NA	False	NA	NA	NA	86453436	86016085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_86017376_86029196_86029275_86031367_86031432_86064265_86064391_86067772_86067956_86098523_86098596_86101051_86101218_86101893_86102033_86103185_86103245_86107222_86107353_86159297_86159468_86194335_86194408_86354529_86354645_86453029
transcript_155124.nic	chr4	+	2460	13	ISM	ENSG00000163629.13	ENST00000427191.6	8487	47	-40	80773	-40	-28550	5prime_fragment	FALSE	canonical	3	76	junction_7	14.6408390014598	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCAAAGCCACTGTTAATT	86590856	True	NA	NA	False	AAGAAA	-3	NA	86594274	86734384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_86594790_86635251_86635372_86672364_86672544_86686709_86686776_86689004_86689191_86693586_86693675_86701240_86701802_86716529_86716626_86717023_86717118_86722211_86722435_86732399_86732475_86732591_86732767_86734302
transcript_155128.known	chr4	+	9261	21	FSM	ENSG00000172493.23	ENST00000395146.9	9261	21	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_19	18.3940207676299	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGGTTGAATCCATGCTT	86926953	True	NA	11	True	AATAAA	-16	NA	86935010	87141039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_86935241_86948497_86948572_87046165_87046287_87046694_87047595_87084119_87084165_87089983_87090071_87091792_87091830_87094914_87094970_87105627_87105683_87105807_87105846_87108158_87108316_87114366_87115300_87125036_87125144_87126098_87126337_87127025_87127118_87127642_87127704_87131082_87131220_87131792_87131865_87132270_87132409_87134470_87134695_87135579
transcript_155130.known	chr4	+	9625	20	FSM	ENSG00000172493.23	ENST00000544085.6	9625	20	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	25.1970626613302	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTGGGGTTGAATCCAT	87006715	False	NA	7	True	AATAAA	-12	NA	87006752	87141035	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_87007425_87046165_87046287_87046694_87047595_87084119_87084165_87089983_87090071_87091792_87091830_87094914_87094970_87105627_87105683_87105807_87105846_87108158_87108316_87114366_87115300_87125036_87125144_87126098_87126337_87127025_87127118_87127642_87127704_87131082_87131220_87131792_87131865_87132270_87132409_87134470_87134695_87135579
transcript_155132.known	chr4	+	1486	7	FSM	ENSG00000172493.23	ENST00000507468.5	1486	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	28.181948517131	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAGTAAGTAAATTTGAA	86926953	True	NA	NA	False	NA	NA	NA	86935010	87091824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_86935241_86948497_86948572_87046165_87046287_87046694_87047595_87084122_87084165_87089983_87090071_87091792
transcript_155137.known	chr4	+	463	4	FSM	ENSG00000172493.23	ENST00000511442.1	463	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	39.8775904766351	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACCAGTCCATTCACACT	86935283	False	NA	NA	False	NA	NA	NA	86936409	87046890	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_86936482_86948497_86948572_87046165_87046287_87046694
transcript_155142.nnic	chr4	+	1355	3	NNC	ENSG00000172493.23	novel	1668	3	NA	NA	-15	22678	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	46	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCACAAATATTTATGTTGA	86926970	True	NA	NA	False	ATTAAA	-22	NA	86935027	86996746	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_+_86935241_86948497_86948572_86995678
transcript_155146.known	chr4	-	2306	7	FSM	ENSG00000285458.1	ENST00000473559.5	2306	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.07769755210323	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTGTCTGTTCATATCC	-86934503	False	229	NA	False	CATAAA	-13	NA	86934732	86886471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_86887894_86888120_86888276_86891455_86891594_86926227_86926327_86932221_86932320_86933394_86933543_86934486
transcript_155150.known	chr4	-	766	4	FSM	ENSG00000163633.12	ENST00000506308.5	766	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	1.24721912892465	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCCATCTAAATGACAGTC	-86892276	True	NA	NA	False	NA	NA	NA	86892416	86887774	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_86887894_86888120_86888276_86891455_86891594_86892062
transcript_155152.known	chr4	-	5631	10	FSM	ENSG00000145332.14	ENST00000273963.10	5631	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	6.53386241243963	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTCTCTAAAAGGTCTGT	-87219677	True	NA	-9	True	ATTAAA	-29	NA	87220618	87160102	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_87163643_87163877_87164080_87170078_87170239_87170446_87170616_87176756_87176869_87178476_87178621_87183202_87183390_87185250_87185800_87195323_87195691_87220417
transcript_155154.known	chr4	-	5175	10	FSM	ENSG00000145332.14	ENST00000498875.6	5175	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	13.8010556046438	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTTATAAATTTGTGTTA	-87219595	True	NA	NA	False	AGTAAA	-26	NA	87220536	87160248	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_87163643_87163877_87164080_87170078_87170239_87170446_87170616_87176756_87176869_87178476_87178621_87183202_87183390_87185250_87185572_87195323_87195691_87220417
transcript_155156.known	chr4	-	4049	9	FSM	ENSG00000145332.14	ENST00000425278.6	4049	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_7	12.6484929932384	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGATAAAAAAGCAGAATCAA	-87219584	True	NA	NA	False	NA	NA	NA	87220525	87161042	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_87163643_87163877_87164080_87170078_87170239_87170446_87170616_87176756_87176869_87178476_87178621_87183202_87183390_87195323_87195691_87220417
transcript_155159.known	chr4	-	1782	7	FSM	ENSG00000198189.11	ENST00000358290.9	1782	7	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	8.47873156131794	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGGATGTGAGGCTCA	-87389267	True	NA	91	True	AATAAA	-30	NA	87391188	87336514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_87337367_87340489_87340607_87357278_87357417_87372708_87372816_87374698_87374831_87382254_87382363_87390860
transcript_155164.known	chr4	+	2820	8	FSM	ENSG00000170502.13	ENST00000302174.9	2820	8	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_1	48.2108464381794	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATGTGTGAATTTTAAAC	87419803	True	NA	3	True	AATAAA	-18	NA	87422572	87459455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_87423013_87434980_87435221_87438276_87438373_87441828_87441916_87449141_87449254_87451588_87451736_87454370_87454456_87457842
transcript_155165.nic	chr4	+	1315	8	NIC	ENSG00000170502.13	novel	2820	8	NA	NA	-3	424	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	111.876207096441	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAACTTCTGTTTCATCTA	87422547	False	NA	4	True	AATAAA	-19	NA	87422569	87458342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_87422618_87434980_87435221_87438276_87438373_87441828_87441916_87449141_87449254_87451588_87451736_87454370_87454456_87457842
transcript_155166.known	chr4	+	2458	8	FSM	ENSG00000170502.13	ENST00000473942.5	2458	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	116.637411297944	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCATGTGTGAATTTTAAA	87419827	True	NA	2	True	AATAAA	-17	NA	87422596	87459454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_87422676_87434980_87435221_87438276_87438373_87441828_87441916_87449141_87449254_87451588_87451736_87454370_87454456_87457842
transcript_155167.known	chr4	+	951	7	FSM	ENSG00000170502.13	ENST00000440591.6	951	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	131.720664033148	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAAGCTTTATGCCAGTC	87420039	False	NA	NA	False	NA	NA	NA	87422808	87457918	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_87423013_87434980_87435221_87441828_87441916_87449141_87449254_87451588_87451736_87454370_87454456_87457842
transcript_155172.known	chr4	-	2778	11	FSM	ENSG00000152583.13	ENST00000282470.11	2778	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	8.03492377064027	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTATGCAAGTGTATTTC	NA	False	NA	NA	False	AATAAA	-20	NA	87529376	87473334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_87473804_87479429_87479579_87480371_87480521_87482423_87482561_87490272_87490394_87490759_87490879_87491617_87491691_87493581_87494599_87494980_87495128_87499520_87499586_87529044
transcript_155174.known	chr4	+	2660	5	FSM	ENSG00000152592.15	ENST00000682781.1	2660	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	0.433012701892219	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTTTATTTGTAATCG	NA	False	NA	NA	False	AATAAA	-22	NA	87654781	87664361	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_87654886_87656471_87656547_87657031_87657080_87659219_87659253_87661961
transcript_155179.known	chr4	+	5089	15	FSM	ENSG00000118762.8	ENST00000237596.7	5089	15	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_5	41.2582706612769	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGAGAGTTGTCTGTTT	88005046	True	NA	8	True	AATAAA	-18	NA	88007634	88077777	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_88008329_88019457_88019572_88036219_88036354_88038250_88038502_88043232_88043458_88046641_88046871_88051990_88052159_88056085_88056268_88057982_88058104_88061905_88062005_88065373_88065496_88065761_88065880_88067897_88068062_88074811_88074960_88075457
transcript_155194.nic	chr4	+	2322	11	ISM	ENSG00000118762.8	ENST00000237596.7	5089	15	-64	12363	-64	-10291	5prime_fragment	FALSE	canonical	3	101	junction_5	37.9211023046535	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCGTGGATGACATTTCAG	NA	False	NA	NA	False	CATAAA	-30	NA	88007570	88065414	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_88008329_88019457_88019572_88036219_88036354_88038250_88038502_88043232_88043458_88046641_88046871_88051990_88052159_88056085_88056268_88057982_88058104_88061905_88062005_88065373
transcript_155201.known	chr4	+	1561	7	FSM	ENSG00000118785.15	ENST00000395080.8	1561	7	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_4	67.5074070010099	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATGTTTTTAAAGGTTT	87974552	True	NA	17	True	AATAAA	-23	NA	87975713	87983411	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_87975801_87976881_87976950_87977058_87977098_87980045_87980127_87980392_87980435_87981474_87981799_87982491
transcript_155206.known	chr4	+	1581	6	FSM	ENSG00000118785.15	ENST00000237623.11	1581	6	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_4	106.26306978438	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTATTTTGGTTTCAATT	87974505	True	NA	32	True	AATAAA	-38	NA	87975666	87983426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_87975801_87976881_87976950_87977058_87977098_87980045_87980127_87981474_87981799_87982491
transcript_155209.known	chr4	+	1196	6	FSM	ENSG00000118785.15	ENST00000360804.4	1196	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	158.6071877312	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCAAACTATCACTGTAT	87974552	True	NA	NA	False	ACTAAA	-38	NA	87975713	87983127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_87975801_87976881_87976950_87977058_87977098_87980392_87980435_87981474_87981799_87982491
transcript_155213.nnic	chr4	+	2994	6	NNC	ENSG00000118762.8	novel	5089	15	NA	NA	-64	1529	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	63.4116708500888	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTCAACCAGTAGTCCAGT	NA	False	NA	NA	False	AAAAAG	-17	NA	88007570	88044913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_+_88008329_88019457_88019572_88031084_88031141_88036219_88036354_88038250_88038502_88043232
transcript_155220.known	chr4	+	923	5	FSM	ENSG00000118785.15	ENST00000508233.6	923	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	184.627158078112	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGGAGAAAAAATACAATTT	87974552	True	NA	NA	False	NA	NA	NA	87975713	87982896	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_87975801_87976881_87976950_87977058_87977098_87981474_87981799_87982491
transcript_155224.nic	chr4	+	2938	5	ISM	ENSG00000118762.8	ENST00000237596.7	5089	15	-64	32864	-64	1529	5prime_fragment	FALSE	canonical	3	109	junction_1	16.976086121365	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTCAACCAGTAGTCCAGT	NA	False	NA	NA	False	AAAAAG	-17	NA	88007570	88044913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_88008329_88019457_88019572_88036219_88036354_88038250_88038502_88043232
transcript_155226.nnic	chr4	+	3008	5	NNC	ENSG00000118762.8	novel	5089	15	NA	NA	-7	1529	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_3	55.251131210139	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTCAACCAGTAGTCCAGT	88005039	True	NA	NA	False	AAAAAG	-17	NA	88007627	88044913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_+_88008329_88019457_88019572_88036219_88036481_88038250_88038502_88043232
transcript_155230.known	chr4	-	4206	16	FSM	ENSG00000118777.12	ENST00000237612.8	4206	16	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_15	7.89767898393783	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATTTTATGTATTCTTT	-88158610	False	NA	NA	False	AATAAA	-17	NA	88158639	88090268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_88092382_88094576_88094660_88095519_88095610_88097452_88097608_88099323_88099449_88101229_88101320_88107183_88107267_88113302_88113554_88114956_88115059_88118108_88118261_88121634_88121793_88131060_88131214_88131802_88131918_88132575_88132636_88139792_88140015_88158385
transcript_155234.nic	chr4	-	2582	16	NIC	ENSG00000118777.12	novel	4206	16	NA	NA	-81	-1899	combination_of_known_junctions	FALSE	canonical	3	12	junction_15	7.4761844100673	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGTTTTTTTGTTGTTTT	-88159076	False	NA	-2	True	CATAAA	-29	NA	88159105	88092167	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_88092382_88094576_88094660_88095519_88095610_88097452_88097608_88099323_88099449_88101229_88101320_88107183_88107267_88113302_88113554_88114956_88115059_88118108_88118261_88121634_88121793_88131060_88131214_88131802_88131918_88132575_88132636_88139792_88140015_88158576
transcript_155235.nic	chr4	-	2178	16	NIC	ENSG00000118777.12	novel	4206	16	NA	NA	-6	-1899	combination_of_known_junctions	FALSE	canonical	3	6	junction_15	8.365006475391	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGTTTTTTTGTTGTTTT	NA	False	NA	-2	True	CATAAA	-29	NA	88159329	88092167	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_88092382_88094576_88094660_88095519_88095610_88097452_88097608_88099323_88099449_88101229_88101320_88107183_88107267_88113302_88113554_88114956_88115059_88118108_88118261_88121634_88121793_88131060_88131214_88131802_88131918_88132575_88132636_88139792_88140015_88159204
transcript_155241.known	chr4	-	6309	7	FSM	ENSG00000163644.15	ENST00000608933.6	6309	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_6	5.4594464513864	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAATCCAACTGTGT	-88283510	True	NA	-11	True	AATAAA	-18	NA	88284561	88257619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_88262727_88265000_88265136_88268189_88268335_88268740_88268907_88277142_88277244_88278143_88278643_88284405
transcript_155244.known	chr4	-	923	6	FSM	ENSG00000163644.15	ENST00000508256.5	923	6	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_5	10.4690018626419	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCTGTGCAACAGTTTT	-88283580	True	NA	NA	False	NA	NA	NA	88284631	88262576	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_88262727_88265000_88265136_88268189_88268335_88268740_88268907_88277142_88277244_88284405
transcript_155247.nic	chr4	-	971	4	ISM	ENSG00000163644.15	ENST00000295908.11	1940	6	-41	6879	12	0	5prime_fragment	FALSE	canonical	3	29	junction_3	6.48074069840786	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAAGGTACTACCACC	-88283568	True	NA	NA	False	AAGAAA	-7	NA	88284619	88268749	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_88268907_88277142_88277244_88278143_88278643_88284405
transcript_15525.known	chr1	+	1514	10	FSM	ENSG00000160789.24	ENST00000675431.1	1514	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	55.4576915815611	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGCTGGCCTGGCCTTTCT	156125917	True	NA	12	True	ATTAAA	-19	NA	156126174	156137866	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156126224_156130616_156130774_156134402_156134529_156134804_156134976_156135186_156135313_156135900_156136122_156136213_156136437_156136920_156137029_156137112_156137233_156137653
transcript_155252.known	chr4	+	3776	23	FSM	ENSG00000138642.16	ENST00000264346.12	3776	23	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_12	6.40699514412642	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGCATGTCGCTCAATT	NA	False	NA	30	True	AATAAA	-20	NA	88378851	88443097	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_88379121_88383220_88383381_88385498_88385576_88390651_88390880_88393487_88393583_88396014_88396143_88396850_88396988_88398141_88398210_88404875_88404998_88405553_88405614_88408523_88408618_88413076_88413267_88417424_88417580_88423859_88423974_88424594_88424703_88428579_88428751_88431161_88431306_88435724_88435892_88436904_88436972_88437710_88437782_88439873_88440058_88440147_88440251_88442233
transcript_155257.known	chr4	+	3511	23	FSM	ENSG00000138646.9	ENST00000264350.8	3511	23	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_14	14.3673758078261	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAAAGTCTTATTCACTA	88455334	True	NA	5	True	AATAAA	-17	NA	88457118	88506163	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_88457535_88459346_88459471_88460094_88460172_88462134_88462357_88463531_88463624_88463854_88463986_88467058_88467205_88468345_88468423_88469156_88469261_88470613_88470674_88472408_88472503_88475840_88476031_88479352_88479508_88486114_88486229_88487068_88487180_88489165_88489337_88493011_88493156_88494164_88494332_88499925_88499993_88500914_88500986_88504231_88504416_88504494_88504598_88505672
transcript_155260.nic	chr4	+	3013	22	ISM	ENSG00000138646.9	ENST00000264350.8	3511	23	0	1573	0	-1362	5prime_fragment	FALSE	canonical	3	108	junction_14	13.9236662099328	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTTGGTAAGTATTATAT	88455334	True	NA	NA	False	AAGAAA	-9	NA	88457118	88504590	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_88457535_88459346_88459471_88460094_88460172_88462134_88462357_88463531_88463624_88463854_88463986_88467058_88467205_88468345_88468423_88469156_88469261_88470613_88470674_88472408_88472503_88475840_88476031_88479352_88479508_88486114_88486229_88487068_88487180_88489165_88489337_88493011_88493156_88494164_88494332_88499925_88499993_88500914_88500986_88504231_88504416_88504494
transcript_155267.nnic	chr4	+	3291	21	NIC	ENSG00000138646.9	novel	3511	23	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_13	29.1382909588054	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATAAAAGTCTTATTCAC	88455327	True	NA	3	True	AATAAA	-15	NA	88457111	88506161	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_88457535_88459346_88459471_88460094_88460172_88462134_88462357_88463531_88463624_88463854_88463986_88467058_88467205_88468345_88468423_88469156_88469261_88470613_88470674_88472408_88472503_88475840_88476031_88479352_88479508_88489165_88489337_88493011_88493156_88494164_88494332_88499925_88499993_88500914_88500986_88504231_88504416_88504494_88504598_88505672
transcript_15527.known	chr1	+	2029	10	FSM	ENSG00000160789.24	ENST00000677389.1	2029	10	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_5	16.9574631226359	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGCTGGCCTGGCCTTTCT	156111601	True	NA	12	True	ATTAAA	-19	NA	156114710	156137866	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156115275_156130616_156130774_156134402_156134529_156134804_156134976_156135186_156135313_156135900_156136122_156136213_156136437_156136920_156137029_156137112_156137233_156137653
transcript_155270.nic	chr4	+	683	3	ISM	ENSG00000138646.9	ENST00000264350.8	3511	23	-114	46040	-114	-2140	5prime_fragment	FALSE	canonical	3	123	junction_1	15	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTCAGATCACATGTGGA	NA	False	NA	NA	False	AAGAAA	-7	NA	88457004	88460123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_88457535_88459346_88459471_88460094
transcript_155273.nnic	chr4	-	764	3	NNC	ENSG00000145337.5	novel	1311	2	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	526.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTTGCAGTAGTCGTTT	-88513281	True	NA	-16	True	AATAAA	-30	NA	88523766	88520997	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_88521383_88521919_88522030_88523497
transcript_155274.known	chr4	-	1311	2	FSM	ENSG00000145337.5	ENST00000273968.5	1311	2	0	0	0	0	multi-exon	FALSE	canonical	3	1078	junction_1	0	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTTGCAGTAGTCGTTT	-88513291	True	NA	-16	True	AATAAA	-30	NA	88523776	88520997	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_88522030_88523497
transcript_155276.known	chr4	+	4914	26	FSM	ENSG00000138641.18	ENST00000402738.6	4914	26	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_16	7.12336998898695	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTCTTATTGTACTTGC	88592236	True	NA	5	True	AATAAA	-21	NA	88592479	88708539	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_88592575_88595556_88595615_88605794_88606050_88649839_88650000_88652011_88652089_88652868_88653091_88654041_88654134_88655173_88655305_88655874_88656036_88658414_88658492_88662430_88662556_88664152_88664213_88667376_88667489_88667891_88668082_88669859_88670024_88670138_88670253_88676217_88676242_88676333_88676424_88677963_88678135_88680092_88680237_88681158_88681326_88686735_88686803_88687216_88687300_88704097_88704282_88704507_88704611_88706751
transcript_155278.known	chr4	-	1917	1	FSM	ENSG00000177432.8	ENST00000323061.7	1917	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAAGACTCGGTACTGT	-88697216	True	NA	NA	False	AATAAA	-22	NA	88697829	88695912	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_88695900_88697800
transcript_15528.known	chr1	+	3178	12	FSM	ENSG00000160789.24	ENST00000368300.9	3178	12	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_10	51.3569585361385	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCTGCTGTGGTGTC	156111601	True	NA	23	True	AATACA	-14	NA	156114710	156140081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156115275_156130616_156130774_156134402_156134529_156134804_156134976_156135186_156135313_156135900_156136122_156136213_156136437_156136920_156137029_156137112_156137233_156137653_156137744_156138487_156138758_156139079
transcript_155280.known	chr4	-	5866	24	FSM	ENSG00000138640.15	ENST00000264344.10	5866	24	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_17	16.470286013335	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCATAAGTACTTTTATT	-89054531	True	NA	NA	False	ATTAAA	-17	NA	89057185	88725959	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_88728660_88731326_88731429_88732001_88732199_88737471_88737556_88739029_88739126_88746931_88747016_88747630_88747852_88748951_88749034_88749770_88749910_88750423_88750638_88758753_88758902_88767552_88767596_88767982_88768060_88781164_88781352_88787752_88787933_88790585_88790628_88805010_88805053_88851019_88851184_88906378_88906463_88938087_88938242_88990972_88991151_89020459_89020670_89029459_89029650_89056937
transcript_155285.known	chr4	-	3169	18	FSM	ENSG00000138640.15	ENST00000508369.5	3169	18	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_17	10.4818181681771	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCACTAGCCAAACATAAAG	-88822901	True	NA	NA	False	GGGGCT	-11	NA	88823201	88727654	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_88728660_88731326_88731429_88732001_88732199_88737471_88737556_88739029_88739126_88746931_88747016_88747630_88747852_88748951_88749034_88749770_88749910_88750423_88750638_88758753_88758902_88767552_88767596_88767982_88768060_88781164_88781352_88787752_88787933_88790585_88790628_88805010_88805053_88822975
transcript_155288.known	chr4	-	3386	17	FSM	ENSG00000138640.15	ENST00000503556.5	3386	17	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_16	11.1551557586616	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGCTGTGTGGCCAATT	-88822931	True	NA	NA	False	TATAAA	-15	NA	88823231	88727425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_88728660_88731326_88731429_88732001_88732199_88737471_88737556_88739029_88739126_88746931_88747016_88747630_88747852_88748951_88749034_88749770_88749910_88750423_88750638_88758753_88758902_88767552_88767596_88767982_88768060_88781164_88781352_88787752_88787933_88790585_88790628_88822975
transcript_15529.known	chr1	+	3218	12	FSM	ENSG00000160789.24	ENST00000675881.1	3218	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	67.0593668154267	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCTGCTGTGGTGTC	156111601	True	NA	23	True	AATACA	-14	NA	156114710	156140081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156115275_156130616_156130774_156134402_156134529_156134804_156134976_156135186_156135313_156135860_156136122_156136213_156136437_156136920_156137029_156137112_156137233_156137653_156137744_156138487_156138758_156139079
transcript_15530.nnic	chr1	+	2963	14	NIC	ENSG00000196189.14	novel	1478	11	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	11.5681668905277	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATGATGGGTGCTGTGT	156149830	True	NA	11	True	ATTAAA	-13	NA	156150193	156177743	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_156150264_156156413_156156575_156158069_156158133_156158387_156158487_156158718_156158825_156160442_156160560_156160904_156161030_156161345_156161519_156162943_156163095_156172825_156173007_156174821_156174941_156175085_156175244_156175555_156175657_156176404
transcript_155300.known	chr4	-	2762	5	FSM	ENSG00000138640.15	ENST00000509094.5	2762	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	26.9849495089392	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCCAGCCTTAAGTATTT	-89054508	True	NA	NA	False	AATAAA	-1	NA	89057162	88936282	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_88938242_88990972_88991151_89020459_89020670_89029459_89029650_89056937
transcript_155304.known	chr4	-	2206	5	FSM	ENSG00000138640.15	ENST00000515600.1	2206	5	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_4	32.2984132737198	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAACCTGTTTTGTTCT	NA	False	NA	-12	True	AATAAA	-8	NA	89057345	88989623	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_88991151_89020459_89020670_89029459_89029650_89056937_89056989_89057117
transcript_155305.nic	chr4	-	2175	4	ISM	ENSG00000138640.15	ENST00000515600.1	2206	5	160	0	0	0	intron_retention	FALSE	canonical	3	60	junction_3	16.391054470859	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAACCTGTTTTGTTCT	-89054531	True	NA	-12	True	AATAAA	-8	NA	89057185	88989623	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_88991151_89020459_89020670_89029459_89029650_89056937
transcript_155307.known	chr4	+	3186	2	FSM	ENSG00000180346.5	ENST00000603357.3	3186	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGAACTTCCAAATTGAAA	89110813	True	NA	35	True	AATAAA	-29	NA	89111532	89114901	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_89111884_89112066
transcript_155314.known	chr4	+	2010	3	FSM	ENSG00000251095.8	ENST00000513572.3	2019	3	7	2	7	-2	multi-exon	FALSE	canonical	3	46	junction_2	13	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCACCTTGAACTTTATT	89678223	True	NA	8	True	AATAAA	-18	NA	89681511	89694130	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_89681685_89691284_89691406_89692414
transcript_155316.nic	chr4	+	716	3	FSM	ENSG00000251095.8	ENST00000691837.1	648	3	-68	0	-68	0	multi-exon	FALSE	canonical	2	38	junction_2	17	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGGTTCAAGTGGTTTT	89678148	True	NA	7	True	AATAAA	-18	NA	89681436	89720172	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_89681685_89691284_89691406_89719825
transcript_155319.known	chr4	-	3177	6	FSM	ENSG00000145335.17	ENST00000394991.8	3177	6	0	0	0	0	multi-exon	TRUE	canonical	3	262	junction_2	14.1279864099595	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTTGGTTTCTGCCTCC	-89835626	True	NA	NA	False	AATAAA	-21	NA	89837161	89724098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_89726661_89729193_89729278_89822245_89822389_89828142_89828185_89835546_89835693_89836961
transcript_155320.known	chr4	-	1420	6	FSM	ENSG00000145335.17	ENST00000394986.5	1420	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_5	97.034014654656	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTTTTATCCCATCTC	-89835604	True	NA	0	True	AATAAA	-23	NA	89837139	89726052	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_89726661_89729193_89729278_89822245_89822389_89828142_89828185_89835546_89835693_89836742
transcript_155322.known	chr4	-	3041	6	FSM	ENSG00000145335.17	ENST00000336904.7	3041	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	99.8050098942934	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTTGGTTTCTGCCTCC	-89838199	True	NA	NA	False	AATAAA	-21	NA	89838315	89724098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_89726661_89729193_89729278_89822245_89822389_89828142_89828185_89835546_89835693_89838251
transcript_155324.known	chr4	-	570	6	FSM	ENSG00000145335.17	ENST00000506244.5	570	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	98.2213826007352	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACAAGTGCTCAGTTCCA	-89835633	True	NA	NA	False	NA	NA	NA	89837168	89726576	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_89726661_89729193_89729278_89822245_89822389_89828142_89828185_89835546_89835693_89837097
transcript_155327.nic	chr4	-	1238	4	ISM	ENSG00000145335.17	ENST00000674129.1	2139	8	-161	96506	-161	0	5prime_fragment	FALSE	canonical	3	281	junction_3	7.58653778449403	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTATAGTGACATCATCTC	-89837355	False	116	NA	False	AATAAA	-17	NA	89837471	89821848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_89822389_89828142_89828185_89835546_89835693_89836961
transcript_15533.nnic	chr1	+	3792	5	NNC	ENSG00000160785.14	novel	3662	4	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_2	77.299336995863	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGGCTTGCGCGTATT	156193911	False	NA	13	True	ATTAAA	-20	NA	156193938	156212795	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_156194248_156196012_156196174_156199834_156200473_156207885_156208014_156210239
transcript_155333.nnic	chr4	-	621	3	NNC	ENSG00000249152.1	novel	616	2	NA	NA	-305	5587	at_least_one_novel_splicesite	FALSE	canonical	3	955	junction_1	50.5	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCCATTGCAGACATCTC	-92277362	False	NA	-15	True	ATTAAA	-14	NA	92277380	92263179	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_92263356_92269242_92269357_92277049
transcript_155334.known	chr4	-	616	2	FSM	ENSG00000249152.1	ENST00000502518.1	616	2	0	0	0	0	multi-exon	FALSE	canonical	3	1056	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAGTAAAAAAAGAGGCAT	-92277057	False	NA	NA	False	AATAAA	-20	NA	92277075	92268766	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_92269357_92277049
transcript_155337.known	chr4	+	4844	14	FSM	ENSG00000152208.13	ENST00000611049.4	4844	14	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_13	10.523571738254	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGCTCTCATACTATT	NA	False	NA	9	True	AATAAA	-11	NA	93084985	93774553	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_93085280_93110747_93110954_93207403_93207458_93216737_93216912_93224613_93224776_93238370_93238491_93395606_93395709_93422770_93422969_93455661_93455975_93490638_93490778_93515215_93515412_93626268_93626436_93769209_93769451_93772075
transcript_155344.nnic	chr4	+	2752	2	NNC	ENSG00000152208.13	novel	5783	16	NA	NA	137125	-519894	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAATGAAGACAACACAGT	92441766	False	NA	NA	False	AGTAAA	-20	NA	92441781	92592353	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_+_92442311_92590130
transcript_155346.known	chr4	-	592	3	FSM	ENSG00000248511.1	ENST00000504213.1	592	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGCTTTATAGATTTTT	-92304052	False	126	NA	False	AATAAA	-15	NA	92304178	92297250	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_92297630_92300798_92300886_92304052
transcript_155348.known	chr4	+	2212	1	FSM	ENSG00000172238.6	ENST00000306011.6	2212	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTTTGTCACTTATTC	93828718	True	NA	NA	False	AATAAA	-10	NA	93828752	93830964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_93828800_93831000
transcript_155350.known	chr4	+	5017	24	FSM	ENSG00000163104.18	ENST00000359052.8	5017	24	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_18	48.7145537850096	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGTATTTTCACACCCT	94205838	True	NA	13	True	AATAAA	-16	NA	94207610	94291290	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_94207736_94208345_94208585_94226118_94226297_94233953_94234123_94236951_94237019_94240905_94241007_94249653_94249756_94250751_94250834_94252615_94253008_94264706_94264907_94270727_94270819_94273616_94273717_94274737_94274798_94274889_94274966_94276338_94276475_94277021_94277160_94278421_94278518_94278615_94278734_94278922_94279051_94280591_94280781_94281471_94281591_94283120_94283304_94284959_94285070_94289472
transcript_155355.nic	chr4	+	5032	24	NIC	ENSG00000163104.18	novel	5017	24	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	119	junction_1	43.0519095826719	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGTATTTTCACACCCT	94207578	False	NA	13	True	AATAAA	-16	NA	94207589	94291290	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_94207736_94208345_94208585_94226118_94226297_94233953_94234123_94236951_94237019_94240905_94241007_94249653_94249756_94250751_94250834_94252615_94253008_94264706_94264907_94270727_94270819_94273616_94273717_94274737_94274798_94274889_94274966_94276338_94276475_94277021_94277160_94278421_94278518_94278615_94278734_94278928_94279051_94280591_94280781_94281471_94281591_94283120_94283304_94284959_94285070_94289472
transcript_155357.known	chr4	+	4649	24	FSM	ENSG00000163104.18	ENST00000457823.6	4649	24	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_18	47.6989218490068	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGTTAATTTTTGGAAA	94207790	False	NA	6	True	AATAAA	-18	NA	94207844	94290821	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_94208071_94208345_94208585_94226118_94226297_94233953_94234123_94236951_94237019_94240905_94241007_94249653_94249756_94250751_94250834_94252615_94253008_94264706_94264907_94270727_94270819_94273616_94273717_94274737_94274798_94274889_94274966_94276338_94276475_94277021_94277160_94278421_94278518_94278615_94278734_94278922_94279051_94280591_94280781_94281471_94281591_94283120_94283304_94284959_94285070_94289472
transcript_155359.known	chr4	+	5094	24	FSM	ENSG00000163104.18	ENST00000354268.9	5094	24	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	41.8771269527262	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTATTTTCACACCCTTT	94204705	True	NA	15	True	AATAAA	-18	NA	94207864	94291292	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_94208071_94208345_94208585_94226118_94226297_94233953_94234123_94236951_94237019_94240905_94241007_94249653_94249756_94250751_94250834_94252615_94253008_94264706_94264907_94270727_94270819_94273616_94273717_94274737_94274798_94274889_94274966_94276338_94276475_94277021_94277160_94278421_94278518_94278615_94278734_94278928_94279051_94280591_94280781_94281471_94281591_94283120_94283304_94284959_94285070_94289472
transcript_155366.nic	chr4	+	2475	18	ISM	ENSG00000163104.18	ENST00000359052.8	5017	24	-21	12573	-21	1558	5prime_fragment	FALSE	canonical	3	119	junction_1	39.5550512087213	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATCAATAACTTGGGTAT	94207578	False	NA	NA	False	NA	NA	NA	94207589	94278717	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_94207736_94208345_94208585_94226118_94226297_94233953_94234123_94236951_94237019_94240905_94241007_94249653_94249756_94250751_94250834_94252615_94253008_94264706_94264907_94270727_94270819_94273616_94273717_94274737_94274798_94274889_94274966_94276338_94276475_94277021_94277160_94278421_94278518_94278615
transcript_15537.known	chr1	+	3467	4	FSM	ENSG00000160785.14	ENST00000359511.5	3467	4	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_2	15.2825245151302	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGCTTGCGCGTATTT	156190014	True	NA	14	True	ATTAAA	-21	NA	156194103	156212796	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156194248_156199834_156200473_156207885_156208014_156210239
transcript_155371.nic	chr4	+	1176	9	ISM	ENSG00000163104.18	ENST00000359052.8	5017	24	-21	38583	-21	-20993	5prime_fragment	FALSE	canonical	3	119	junction_1	38.6902765562615	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAAACAGAAATTTTCAAT	94207578	False	NA	NA	False	ACTAAA	-7	NA	94207589	94252707	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_94207736_94208345_94208585_94226118_94226297_94233953_94234123_94236951_94237019_94240905_94241007_94249653_94249756_94250751_94250834_94252615
transcript_155372.nic	chr4	+	1271	9	ISM	ENSG00000163104.18	ENST00000457823.6	4649	24	-15	38114	-15	-20993	5prime_fragment	FALSE	canonical	3	129	junction_1	35.686131760111	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAAACAGAAATTTTCAAT	94207775	False	NA	NA	False	ACTAAA	-7	NA	94207829	94252707	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_94208071_94208345_94208585_94226118_94226297_94233953_94234123_94236951_94237019_94240905_94241007_94249653_94249756_94250751_94250834_94252615
transcript_15538.nnic	chr1	+	3587	4	NNC	ENSG00000160785.14	novel	3662	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	85.9082197593584	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGGCTTGCGCGTATT	156193904	True	NA	13	True	ATTAAA	-20	NA	156193931	156212795	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_156194248_156199834_156200473_156207936_156208014_156210239
transcript_155384.known	chr4	+	6043	13	FSM	ENSG00000163110.15	ENST00000317968.9	6043	13	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_8	17.6231776047593	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCTCTCCTTTTTGTTGT	94448321	True	NA	12	True	AATAAA	-23	NA	94451941	94668223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_94451996_94455246_94455385_94523723_94523876_94573350_94573394_94575615_94576035_94585564_94585738_94586407_94586445_94618003_94618192_94640275_94640451_94654459_94654641_94657426_94657548_94662421_94662538_94663977
transcript_155390.known	chr4	+	2979	13	FSM	ENSG00000163110.15	ENST00000542407.5	2979	13	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	41.0385997162021	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAGAGAGAGAGAAT	94448335	True	NA	NA	False	NA	NA	NA	94451955	94665500	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_94451996_94455246_94455385_94523723_94523876_94573350_94573394_94575942_94576035_94585564_94585738_94586407_94586445_94618003_94618192_94640275_94640451_94654459_94654641_94657426_94657548_94662421_94662538_94663977
transcript_155392.known	chr4	+	5713	12	FSM	ENSG00000163110.15	ENST00000437932.5	5713	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	45.8872135091723	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCCTTTTTGTTGTTGTT	94448236	True	NA	16	True	AATAAA	-27	NA	94451856	94668227	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_94451996_94455246_94455385_94523723_94523876_94573350_94573394_94585564_94585738_94586407_94586445_94618003_94618192_94640275_94640451_94654459_94654641_94657426_94657548_94662421_94662538_94663977
transcript_155393.known	chr4	+	1853	12	FSM	ENSG00000163110.15	ENST00000627587.2	1853	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	43.0139320117034	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAAATTCCAGCTTTAAA	94448322	True	NA	NA	False	NA	NA	NA	94451942	94664186	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_94451996_94455246_94455385_94573350_94573394_94575615_94576035_94585564_94585738_94586407_94586445_94618003_94618192_94640275_94640451_94654459_94654641_94657426_94657548_94662421_94662538_94663977
transcript_155397.known	chr4	+	2020	9	FSM	ENSG00000163110.15	ENST00000380180.7	2020	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	76.9866059779232	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTCATTTGGAAATCAT	94448236	True	NA	NA	False	AATAAA	-11	NA	94451856	94588216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_94451996_94455246_94455385_94523723_94523876_94573350_94573394_94575942_94576035_94584985_94585004_94585564_94585738_94586407_94586445_94586988
transcript_155401.nic	chr4	+	626	4	NIC	ENSG00000163110.15	novel	463	3	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	72.2403396079134	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGATTTACAGAATAGAAA	94448232	True	NA	19	True	AATAAA	-30	NA	94451852	94549986	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_94451996_94455246_94455385_94523723_94523876_94549793
transcript_155402.known	chr4	+	743	4	FSM	ENSG00000163110.15	ENST00000509333.5	743	4	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_3	6.23609564462324	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCTTTAATAACATTTT	94448307	True	NA	NA	False	AATAAA	-30	NA	94451927	94573735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_94451996_94455246_94455385_94523723_94523876_94573350
transcript_155403.known	chr4	+	1189	3	FSM	ENSG00000163110.15	ENST00000359265.8	1189	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	83	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACTAACGGAGTCTCCT	94448265	True	NA	2	True	ATTAAA	-16	NA	94451885	94457184	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_94451996_94455246_94455385_94456243
transcript_155405.known	chr4	+	372	2	FSM	ENSG00000163110.15	ENST00000512274.1	372	2	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGATTTAGCAAGGATAAC	94448299	True	NA	NA	False	AATAAA	-12	NA	94451919	94455542	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_94451996_94455246
transcript_155407.known	chr4	+	463	3	FSM	ENSG00000163110.15	ENST00000511767.3	463	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	79	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGATTTACAGAATAGAAA	94455243	True	NA	19	True	AATAAA	-30	NA	94455266	94549986	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_94455385_94523723_94523876_94549793
transcript_155408.known	chr4	+	5580	13	FSM	ENSG00000138696.11	ENST00000515059.6	5580	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.7950549357115	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGACTGTTATGTTATAGT	94757836	True	NA	NA	False	AATAAA	-29	NA	94757954	95158448	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_94758069_94875830_94875901_94996039_94996135_95104407_95104568_95114719_95114823_95115684_95115788_95123809_95123907_95124982_95125122_95129861_95130055_95131214_95131513_95148747_95148924_95152642_95152774_95154547
transcript_15541.known	chr1	+	3662	4	FSM	ENSG00000160785.14	ENST00000423538.6	3662	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	88.2433503947402	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGGCTTGCGCGTATT	156193904	True	NA	13	True	ATTAAA	-20	NA	156193931	156212795	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156194248_156199834_156200473_156207861_156208014_156210239
transcript_155419.nnic	chr4	-	1293	5	Antisense	novelGene_ENSG00000253170.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	14	junction_2	34.1577224065071	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCTCACACACAACTTAAA	-97136787	True	NA	NA	False	AATAAA	-8	NA	97141396	97109888	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr4_-_97110427_97111212_97111426_97134546_97134736_97139504_97139759_97141297
transcript_15542.known	chr1	-	1918	9	FSM	ENSG00000160781.17	ENST00000652405.1	1918	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	8.77140239642442	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTTAGACTTTGGGAAGC	-156248050	False	NA	-89	True	NA	NA	NA	156248090	156243495	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156244404_156244581_156244673_156244760_156244912_156245141_156245239_156245534_156245662_156245781_156245988_156246122_156246251_156246680_156246757_156247956
transcript_155426.nnic	chr4	-	1080	4	Antisense	novelGene_ENSG00000253170.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_1	29.6348143611905	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCTCACACACAACTTAAA	-97136787	True	NA	NA	False	AATAAA	-8	NA	97141396	97109888	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr4_-_97110427_97134546_97134736_97139504_97139759_97141297
transcript_155432.nnic	chr4	-	829	3	Antisense	novelGene_ENSG00000253170.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_1	2.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCTCACACACAACTTAAA	-97136790	True	NA	NA	False	AATAAA	-8	NA	97141399	97109888	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr4_-_97110427_97134546_97134736_97141297
transcript_155435.nnic	chr4	-	1753	3	Antisense	novelGene_ENSG00000253170.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	70	junction_2	14	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGCTTATTTTTCTCT	-97136787	True	NA	-28	True	AATAAA	-31	NA	97141396	97133335	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr4_-_97134736_97139504_97139759_97141297
transcript_15544.known	chr1	+	1007	7	FSM	ENSG00000260238.6	ENST00000490491.5	1007	7	0	0	0	0	multi-exon	TRUE	canonical	3	67	junction_6	533.269918104852	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTCCAGTTTATGGAGT	156200077	True	NA	21	True	AATAAA	-30	NA	156212981	156243332	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156213177_156232319_156232426_156233627_156233729_156236287_156236484_156242552_156242592_156242761_156242832_156243032
transcript_155440.known	chr4	+	2092	15	FSM	ENSG00000138698.15	ENST00000339360.9	2092	15	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	28.6385817970607	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTGTATTCCTGTTGC	98259177	False	NA	NA	False	NA	NA	NA	98261517	98442334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_98261570_98293404_98293516_98343138_98343262_98352475_98352602_98379016_98379164_98391951_98392081_98404476_98404603_98416744_98416889_98417366_98417499_98418656_98418792_98420018_98420145_98421254_98421395_98433935_98434063_98436939_98437069_98441989
transcript_155444.known	chr4	+	1942	14	FSM	ENSG00000138698.15	ENST00000408900.7	1942	14	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	36.9732031541668	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTGTATTCCTGTTGC	98259177	False	NA	NA	False	NA	NA	NA	98261517	98442334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_98261570_98293407_98293516_98343138_98343262_98352475_98352602_98391951_98392081_98404476_98404603_98416744_98416889_98417366_98417499_98418656_98418792_98420018_98420145_98421254_98421395_98433935_98434063_98436939_98437069_98441989
transcript_155445.known	chr4	+	1686	13	FSM	ENSG00000138698.15	ENST00000264572.11	1686	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	44.4462846841243	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTGCCCGATACACGGCA	98259090	True	NA	NA	False	NA	NA	NA	98261430	98442117	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_98261570_98293404_98293516_98343138_98343262_98352475_98352602_98404476_98404603_98416744_98416889_98417366_98417499_98418656_98418792_98420018_98420145_98421254_98421395_98433935_98434063_98436939_98437069_98441989
transcript_155448.known	chr4	+	875	6	FSM	ENSG00000138698.15	ENST00000507303.5	875	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	45.5438250479689	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGCATTGTTTATGAGAG	98259162	False	NA	4	True	AGTAAA	-17	NA	98261502	98392252	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_98261570_98293404_98293516_98343138_98343262_98352475_98352602_98379016_98379164_98391951
transcript_15545.known	chr1	+	852	7	FSM	ENSG00000260238.6	ENST00000368276.8	852	7	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_6	515.658290171139	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTGGGGTCCCCATCAT	156200102	True	NA	-48	True	NA	NA	NA	156213006	156243263	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156213177_156232319_156232426_156233627_156233729_156236348_156236484_156242552_156242592_156242761_156242832_156243032
transcript_155451.known	chr4	+	941	5	FSM	ENSG00000138698.15	ENST00000511379.5	941	5	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	22.951034835057	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAGGAGTAGCTTTAAAAT	98259119	True	NA	NA	False	AATAAA	-36	NA	98261459	98379490	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_98261570_98293407_98293516_98343138_98343262_98352475_98352602_98379016
transcript_155462.known	chr4	-	3242	8	FSM	ENSG00000168785.8	ENST00000508798.5	3242	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	83.0040569453551	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGTGTCTTTCTTCAT	-98657385	True	NA	-5	True	AATAAA	-32	NA	98658570	98470366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_98472588_98476188_98476306_98476412_98476461_98478684_98478747_98482004_98482176_98486737_98486885_98507677_98507729_98658145
transcript_155463.known	chr4	-	1191	8	FSM	ENSG00000168785.8	ENST00000505184.5	1191	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	90.1877859507255	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACATTCTTGTCCTCA	-98657676	False	1185	NA	False	AAAAAG	-45	NA	98657692	98472209	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_98472588_98476188_98476306_98476412_98476461_98478684_98478811_98482004_98482176_98486737_98486885_98507677_98507729_98657539
transcript_155464.known	chr4	-	3347	8	FSM	ENSG00000168785.8	ENST00000305798.8	3347	8	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_6	41.5932686861708	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGTGTCTTTCTTCAT	-98657426	True	NA	-5	True	AATAAA	-32	NA	98658611	98470366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_98472588_98476188_98476306_98476412_98476461_98478684_98478811_98482004_98482176_98486737_98486885_98507677_98507729_98658145
transcript_155470.nnic	chr4	-	3325	7	NIC	ENSG00000168785.8	novel	3347	8	NA	NA	-125	0	combination_of_known_splicesites	FALSE	canonical	3	62	junction_5	73.9964338480053	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGTGTCTTTCTTCAT	NA	False	NA	-5	True	AATAAA	-32	NA	98658736	98470366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_98472588_98476188_98476306_98476412_98476461_98478684_98478811_98482004_98482176_98507677_98507729_98658145
transcript_155471.nnic	chr4	-	1394	7	NIC	ENSG00000168785.8	novel	3347	8	NA	NA	-37	0	combination_of_known_splicesites	FALSE	canonical	3	62	junction_5	73.9964338480053	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACATTCTTGTCCTCA	-98657463	True	NA	NA	False	AAAAAG	-45	NA	98658648	98472209	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_98472588_98476188_98476306_98476412_98476461_98478684_98478811_98482004_98482176_98507677_98507729_98658145
transcript_155472.nnic	chr4	-	1176	7	NIC	ENSG00000168785.8	novel	3242	8	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_4	103.439193087856	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATAACCAGTA	-98657444	True	NA	NA	False	NA	NA	NA	98658629	98472344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_98472588_98476188_98476306_98476412_98476461_98478684_98478747_98482004_98482176_98507677_98507729_98658145
transcript_155473.nnic	chr4	-	1347	7	NIC	ENSG00000168785.8	novel	3347	8	NA	NA	-125	0	combination_of_known_splicesites	FALSE	canonical	3	62	junction_5	73.9964338480053	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATAACCAGTA	NA	False	NA	NA	False	NA	NA	NA	98658736	98472344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_98472588_98476188_98476306_98476412_98476461_98478684_98478811_98482004_98482176_98507677_98507729_98658145
transcript_155479.known	chr4	-	898	8	FSM	ENSG00000151247.13	ENST00000505992.1	898	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	1051.41944871819	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAGAGAAGTCTCATTCG	-98908455	True	NA	NA	False	TTTAAA	-29	NA	98929133	98880897	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_98881143_98884921_98885062_98886453_98886547_98887078_98887193_98887888_98887953_98891236_98891333_98901875_98901983_98929094
transcript_155480.known	chr4	-	1132	8	FSM	ENSG00000151247.13	ENST00000504432.5	1132	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	1071.44241895813	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTGGCTAGAGTTT	-98908447	True	NA	NA	False	NA	NA	NA	98929125	98880844	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_98881143_98884921_98885062_98887078_98887193_98887888_98887953_98891236_98891333_98901875_98901983_98909677_98909960_98929094
transcript_155489.known	chr4	-	1097	7	FSM	ENSG00000151247.13	ENST00000280892.10	1097	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	886.90773665209	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACTCTGTAATAGTTCAG	-98908414	True	NA	NA	False	CATAAA	-12	NA	98929092	98880764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_98881143_98884921_98885062_98887078_98887193_98887888_98887953_98891236_98891333_98901875_98901983_98928894
transcript_15549.known	chr1	+	773	6	FSM	ENSG00000260238.6	ENST00000320139.5	773	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	550.46947235973	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCTGTGAGTCTGTCCA	156200104	True	NA	10	True	AATAAA	-19	NA	156213008	156243321	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156213177_156232319_156232426_156233627_156233729_156242552_156242592_156242761_156242832_156243032
transcript_155490.known	chr4	-	2427	7	FSM	ENSG00000151247.13	ENST00000450253.7	2427	7	0	0	0	0	multi-exon	FALSE	canonical	3	1488	junction_6	362.245619557903	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATTTCATTGTAAAATTT	-98908455	True	NA	-3	True	AATAAA	-17	NA	98929133	98879275	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_98881143_98884921_98885062_98887078_98887193_98887888_98887953_98891236_98891333_98901875_98901983_98929094
transcript_155498.known	chr4	-	686	6	FSM	ENSG00000151247.13	ENST00000511644.5	686	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	917.427141521331	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTGGCTAGAGTTT	-98908423	True	NA	NA	False	NA	NA	NA	98929101	98880844	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_98881143_98887078_98887193_98887888_98887953_98891236_98891333_98901875_98901983_98929094
transcript_15550.known	chr1	+	837	6	FSM	ENSG00000160783.19	ENST00000497069.2	837	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	537.73316803039	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGGAATTTGCTGGAGG	156200121	True	NA	NA	False	NA	NA	NA	156213025	156239718	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156213177_156225556_156225669_156232319_156232426_156233627_156233729_156236287_156236484_156239547
transcript_155508.known	chr4	+	2686	11	FSM	ENSG00000164024.12	ENST00000296411.11	2686	11	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_9	48.3297010129382	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTAGTCATTAACTTTG	98982468	True	NA	24	True	ATTAAA	-21	NA	98995720	99062809	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_98995868_99028866_99028919_99034229_99034343_99035399_99035461_99039373_99039466_99041042_99041127_99043248_99043388_99045178_99045311_99048732_99048877_99057752_99057819_99061153
transcript_155511.nic	chr4	+	2542	10	NIC	ENSG00000164024.12	novel	2686	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_8	176.867461013698	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTAGTCATTAACTTTG	98982468	True	NA	24	True	ATTAAA	-21	NA	98995720	99062809	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_98995868_99028866_99028919_99034229_99034343_99035399_99035461_99039373_99039466_99041042_99041127_99043248_99043388_99045178_99045311_99057752_99057819_99061153
transcript_155519.known	chr4	-	2652	9	FSM	ENSG00000197894.12	ENST00000296412.14	2652	9	0	0	0	0	multi-exon	FALSE	canonical	3	1816	junction_8	178.157760145327	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCTGGTGGTGGTAAGT	-99070257	True	NA	45	True	AATAAA	-22	NA	99088788	99070977	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_99072442_99072572_99072712_99074913_99075050_99076291_99076553_99076703_99076924_99081364_99081453_99081974_99082117_99085114_99085217_99088688
transcript_15552.known	chr1	+	1068	5	FSM	ENSG00000160783.19	ENST00000368277.3	1068	5	0	0	0	0	multi-exon	FALSE	canonical	3	1070	junction_3	45.18849411078	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGAGCATGCTTCCTCT	156200102	True	NA	42	True	AATAAA	-21	NA	156213006	156240042	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156213177_156232319_156232426_156233627_156233729_156236287_156236484_156239547
transcript_155527.known	chr4	-	1909	6	FSM	ENSG00000197894.12	ENST00000508511.5	1909	6	0	0	0	0	multi-exon	FALSE	canonical	3	1816	junction_5	224.622883963322	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAAAAATTAAAATAT	-99070186	True	NA	NA	False	NA	NA	NA	99088717	99075224	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_99076553_99076703_99076924_99081364_99081453_99081974_99082117_99085114_99085217_99088688
transcript_15553.known	chr1	+	1019	5	FSM	ENSG00000160783.19	ENST00000368279.7	1019	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	457.978984233993	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTGAGCATGCTTCCT	156200088	True	NA	40	True	AATAAA	-19	NA	156212992	156240040	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156213177_156232319_156232426_156233627_156233729_156236348_156236484_156239547
transcript_155531.known	chr4	-	1475	7	FSM	ENSG00000197894.12	ENST00000512621.5	1475	7	0	0	0	0	multi-exon	FALSE	canonical	3	2206	junction_5	81.1783016985861	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAACATAATAAAAGTAA	-99066685	False	NA	-59	True	CATAAA	-25	NA	99085216	99072185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_99072712_99074913_99075050_99076291_99076553_99076703_99076924_99081364_99081453_99081974_99082117_99085114
transcript_155533.known	chr4	-	3516	8	FSM	ENSG00000145331.14	ENST00000394877.7	3516	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	12.7471485406881	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTCTGCTGAAATACAGA	-99563744	True	NA	NA	False	AATAAA	-42	NA	99564017	99546708	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_99549357_99550884_99550991_99553784_99553935_99556145_99556221_99557344_99557417_99558048_99558212_99559153_99559351_99563912
transcript_155535.known	chr4	-	3547	8	FSM	ENSG00000145331.14	ENST00000394876.7	3547	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	10.7684345971673	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATGTCTGCTGAAATACA	-99563766	True	NA	NA	False	AATAAA	-40	NA	99564039	99546710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_99549357_99550884_99550991_99553784_99553935_99556145_99556221_99557344_99557417_99558048_99558212_99559153_99559362_99563912
transcript_15554.known	chr1	+	655	5	FSM	ENSG00000260238.6	ENST00000567140.3	655	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	30.0873727666608	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTTCTTTCCTCTTCCCC	156200104	True	NA	-97	True	NA	NA	NA	156213008	156243214	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156213177_156236287_156236484_156242552_156242592_156242761_156242832_156243032
transcript_155542.known	chr4	-	4163	7	FSM	ENSG00000109270.13	ENST00000499666.7	4163	7	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_6	24.7616414821168	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGTTGGACATATGTGTAT	-99890523	True	NA	NA	False	AAGAAA	-31	NA	99894427	99878335	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_99882068_99884061_99884126_99885541_99885676_99887295_99887355_99891999_99892035_99893954_99894001_99894334
transcript_155544.known	chr4	-	961	6	FSM	ENSG00000109270.13	ENST00000515100.1	961	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	149.554806007697	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAACTTTCCTTTGTACAT	-99890524	True	NA	NA	False	AATAAA	-13	NA	99894428	99881492	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_99882068_99884061_99884126_99885541_99885676_99887295_99887355_99891999_99892035_99894334
transcript_155546.known	chr4	-	1220	7	FSM	ENSG00000109270.13	ENST00000226522.8	1220	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	148.612938721888	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTGAGCACTGTATAGG	-99890472	True	NA	-44	True	AATAAA	-19	NA	99894376	99881206	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_99882068_99884061_99884126_99885541_99885655_99887295_99887355_99891999_99892035_99893954_99894001_99894334
transcript_15555.known	chr1	+	884	5	FSM	ENSG00000160783.19	ENST00000368273.8	884	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	533.96927580152	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTTCTCTAGGTTCAG	156200101	True	NA	NA	False	NA	NA	NA	156213005	156239851	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156213177_156225556_156225669_156233627_156233729_156236287_156236484_156239547
transcript_155550.known	chr4	-	5967	8	FSM	ENSG00000164031.17	ENST00000442697.7	5967	8	0	0	0	0	multi-exon	TRUE	canonical	3	105	junction_5	14.7689691237944	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTTTTTATCATGTTT	-99946607	False	133369	NA	False	AATAAA	-23	NA	99946618	99896247	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_99901153_99903725_99903899_99905596_99905707_99906516_99906612_99908710_99908897_99923039_99923186_99930449_99930622_99946438
transcript_155554.known	chr4	-	2617	7	FSM	ENSG00000164031.17	ENST00000334223.6	2617	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_6	46.5310529527206	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAGTGCTTAAGAGAAAATA	-99946577	False	133369	NA	False	NA	NA	NA	99946588	99899395	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_99901153_99903725_99903899_99905596_99905707_99906516_99906612_99908710_99908897_99923039_99923186_99946438
transcript_155555.nic	chr4	-	1034	7	ISM	ENSG00000164031.17	ENST00000442697.7	5967	8	-24	7530	-24	0	5prime_fragment	FALSE	canonical	3	105	junction_4	15.9478316185409	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGATTATGTGACTAATAT	-99946631	False	133369	-23	True	TATAAA	-37	NA	99946642	99903777	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_99903899_99905596_99905707_99906516_99906612_99908710_99908897_99923039_99923186_99930449_99930622_99946438
transcript_155556.known	chr4	-	561	4	FSM	ENSG00000164031.17	ENST00000471738.1	561	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	66.001683480213	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGCTGTTGTTTTGCGTG	-99946563	False	133369	2	True	AATAAA	-27	NA	99946574	99923680	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_99923878_99924759_99924816_99930449_99930622_99946438
transcript_155557.known	chr4	-	339	3	FSM	ENSG00000164031.17	ENST00000610281.1	339	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	69.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGGATGGTGGACCTGTA	-99946569	False	133369	NA	False	NA	NA	NA	99946580	99924790	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_99924816_99930449_99930622_99946438
transcript_155559.known	chr4	-	868	5	FSM	ENSG00000164032.12	ENST00000651623.1	868	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5354.71331515516	6304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTTGTGTATTAAATTTG	-99816911	True	NA	-35	True	AATAAA	-15	NA	99950280	99948087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_99948524_99948813_99948941_99949272_99949387_99949662_99949741_99950167
transcript_155560.known	chr4	-	726	5	FSM	ENSG00000164032.12	ENST00000529158.5	726	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	5375.17381114323	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAGTTATAGTAACAAACA	-99816930	True	NA	-119	True	TTTAAA	-28	NA	99950299	99948171	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_99948524_99948810_99948941_99949272_99949387_99949662_99949741_99950247
transcript_155564.known	chr4	-	1843	2	FSM	ENSG00000164032.12	ENST00000511348.1	1843	2	0	0	0	0	multi-exon	FALSE	canonical	3	11763	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGTGTATTAAATTTGCT	-99950344	False	NA	-33	True	AATAAA	-17	NA	99950355	99948085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_99949741_99950167
transcript_155565.known	chr4	-	2604	3	FSM	ENSG00000145358.6	ENST00000273990.6	2604	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	0.5	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTGTCCTCTTTTTTT	-100189900	True	NA	-1	True	AATAAA	-18	NA	100190468	100185869	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_100188168_100189892_100190033_100190302
transcript_155568.known	chr4	-	4743	14	FSM	ENSG00000138814.17	ENST00000394854.8	4743	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.0568940745294	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTGCTTGGTCTTTCTGA	-101343578	True	NA	1	True	AATAAA	-32	NA	101347526	101023417	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_101026062_101029165_101029196_101032266_101032365_101040481_101040567_101061086_101061162_101063231_101063358_101080531_101080627_101083185_101083264_101093775_101093916_101098366_101098513_101099610_101099723_101108953_101109079_101195915_101196117_101346738
transcript_155572.known	chr4	-	3604	13	FSM	ENSG00000138814.17	ENST00000394853.8	3604	13	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	7.75806032459145	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAATTCTCATCCTTCCAC	-101347289	False	NA	-10	True	AATAAA	-16	NA	101347327	101024327	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_101026062_101032266_101032365_101040481_101040567_101061086_101061162_101063231_101063358_101080531_101080627_101083185_101083264_101093775_101093916_101098366_101098513_101099610_101099723_101108953_101109079_101195915_101196117_101346738
transcript_155579.known	chr4	+	790	2	FSM	ENSG00000254531.2	ENST00000527564.2	822	2	28	4	4	0	multi-exon	FALSE	canonical	3	11	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCCTGTTTTATTTCCA	101347430	True	NA	25	True	AATAAA	-15	NA	101347779	101348883	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_101348010_101348323
transcript_155580.known	chr4	+	442	2	FSM	ENSG00000254531.2	ENST00000529296.2	648	2	40	166	16	-162	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCTGCGCCACAGAGTC	101347442	True	NA	NA	False	NA	NA	NA	101347791	101348721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_101347836_101348323
transcript_155581.known	chr4	+	3322	17	FSM	ENSG00000153064.12	ENST00000322953.9	3322	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.42383992870816	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGAGTATTGGCCAATAAA	101790666	True	NA	NA	False	AATAAA	-31	NA	101790729	102074812	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_101790951_101829807_101830207_101855034_101855190_101862525_101862665_101870504_101870645_101895304_101895411_101917992_101918190_102021513_102021593_102025200_102025510_102029959_102030266_102043838_102043908_102060210_102060390_102063074_102063139_102071274_102071305_102072344_102072401_102073683_102073749_102074004
transcript_155583.known	chr4	+	3044	16	FSM	ENSG00000153064.12	ENST00000428908.5	3044	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	2.37954243967663	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGAGTATTGGCCAATA	NA	False	NA	NA	False	AATAAA	-29	NA	101790606	102074810	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_101790951_101855034_101855190_101862525_101862665_101870504_101870645_101895304_101895411_101917992_101918190_102021513_102021593_102025200_102025510_102029959_102030266_102043838_102043908_102060210_102060390_102063074_102063139_102071274_102071305_102072344_102072401_102073683_102073749_102074004
transcript_155585.known	chr4	-	3053	9	FSM	ENSG00000138821.14	ENST00000683412.1	3053	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	92.7462094912779	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAAACCATGTATTGTG	-102345183	False	2560	-13	True	ATTAAA	-31	NA	102345205	102261676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_102263194_102267489_102267675_102267871_102268080_102304316_102304482_102304988_102305112_102307435_102307606_102315667_102315831_102344443_102344916_102345155
transcript_155586.known	chr4	-	3152	9	FSM	ENSG00000138821.14	ENST00000356736.5	3152	9	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_8	52.274366328058	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGTGTCATTTGTTAT	-102342922	True	NA	-2	True	ATTAAA	-42	NA	102345482	102261665	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_102263194_102267489_102267675_102267871_102268080_102304316_102304482_102304988_102305112_102307435_102307606_102315667_102315831_102344443_102344916_102345344
transcript_15559.known	chr1	-	1961	5	FSM	ENSG00000160781.17	ENST00000623241.3	1961	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	7.62807315119618	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTCCTCTTCTGGAGTTT	-156248077	False	NA	86	True	CATAAA	-23	NA	156248117	156243320	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156244404_156244760_156244912_156245141_156245239_156245781_156246251_156247956
transcript_155592.known	chr4	-	3238	8	FSM	ENSG00000138821.14	ENST00000394833.6	3238	8	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_5	32.150157901031	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGTGTCATTTGTTAT	-102345117	False	NA	-2	True	ATTAAA	-42	NA	102345139	102261665	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_102263194_102267489_102267675_102267871_102268080_102304316_102304482_102304988_102305112_102307435_102307606_102315667_102315831_102344443
transcript_155593.known	chr4	-	608	2	FSM	ENSG00000248161.5	ENST00000505709.1	608	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTTATGTCTTTTTA	NA	False	NA	2	True	ATTAAA	-21	NA	102431282	102418601	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_102418989_102431061
transcript_155595.known	chr4	+	4055	24	FSM	ENSG00000109320.13	ENST00000226574.9	4055	24	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	8.46587724366033	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTTTGATCTGTGCAAA	102501291	False	NA	16	True	AATAAA	-25	NA	102501358	102617302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_102501789_102525511_102525558_102529835_102529915_102533844_102533886_102537857_102537957_102566986_102567136_102576875_102577040_102578880_102579040_102580534_102580640_102582865_102582958_102584681_102584821_102593424_102593569_102594891_102594982_102596137_102596333_102597519_102597662_102600894_102601010_102606495_102606698_102607149_102607320_102607648_102607752_102610574_102610700_102612043_102612111_102612433_102612607_102613424_102613582_102616433
transcript_155598.known	chr4	+	3693	24	FSM	ENSG00000109320.13	ENST00000394820.8	3693	24	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	9.60072461033428	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTTCCTATTGTCATTAA	102501263	False	NA	NA	False	NA	NA	NA	102501330	102616915	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_102501789_102525511_102525558_102529835_102529915_102533847_102533886_102537857_102537957_102566986_102567136_102576875_102577040_102578880_102579040_102580534_102580640_102582865_102582958_102584681_102584821_102593424_102593569_102594891_102594982_102596137_102596333_102597519_102597662_102600894_102601010_102606495_102606698_102607149_102607320_102607648_102607752_102610574_102610700_102612043_102612111_102612433_102612607_102613424_102613582_102616433
transcript_155604.known	chr4	-	4001	17	FSM	ENSG00000109323.11	ENST00000647097.2	4001	17	0	0	0	0	multi-exon	TRUE	canonical	3	135	junction_11	19.6284829711825	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTAGCTCAAGGGCTGGG	-102758342	True	NA	NA	False	AATAAA	-7	NA	102760968	102630769	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_102632282_102634787_102635046_102635864_102636008_102639712_102639858_102650536_102650702_102657681_102657901_102664684_102664853_102668962_102669050_102671280_102671399_102673918_102674071_102689573_102689685_102690595_102690772_102714437_102714562_102722870_102723042_102723861_102723968_102726588_102726684_102760717
transcript_155615.known	chr4	-	574	8	FSM	ENSG00000109332.20	ENST00000502404.5	574	8	0	0	0	0	multi-exon	FALSE	canonical	1	16	junction_7	1400.5882291934	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAACCTGCATTATAGCT	-102825762	False	4107	-61	True	NA	NA	NA	102825780	102797398	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102825238_102825318_102825721
transcript_155616.known	chr4	-	3729	8	FSM	ENSG00000109332.20	ENST00000453744.7	3729	8	0	0	0	0	multi-exon	FALSE	canonical	1	1098	junction_3	787.039816952985	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTCTTACTCGGTAAT	-102806629	True	NA	-1	True	ATTAAA	-18	NA	102827551	102794382	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826637_102827426
transcript_155618.known	chr4	-	2368	8	FSM	ENSG00000109332.20	ENST00000394801.8	2368	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1200.80695656661	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTTTGTTTGACAAGT	-102827930	False	NA	-16	True	AATAAA	-17	NA	102827948	102795975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826637_102827591
transcript_155619.known	chr4	-	838	8	FSM	ENSG00000109332.20	ENST00000349311.12	838	8	0	0	0	0	multi-exon	FALSE	canonical	1	80	junction_7	1178.36457059116	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATCTGAGAAGACTTAAG	-102827831	False	98	74	True	NA	NA	NA	102827849	102797263	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826637_102827734
transcript_155620.known	chr4	-	2227	8	FSM	ENSG00000109332.20	ENST00000394803.9	2227	8	0	0	0	0	multi-exon	FALSE	canonical	1	491	junction_7	1067.21143401763	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTTTGTTTGACAAGT	-102828141	False	NA	-16	True	AATAAA	-17	NA	102828159	102795975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826637_102827943
transcript_155621.known	chr4	-	896	8	FSM	ENSG00000109332.20	ENST00000338145.7	896	8	0	0	0	0	multi-exon	TRUE	canonical	1	53	junction_7	1185.91247913295	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTAAGTTCTTCCAGCTT	-102868180	True	NA	-83	True	NA	NA	NA	102868875	102797251	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826637_102868714
transcript_155629.known	chr4	-	4166	8	FSM	ENSG00000109332.20	ENST00000394804.6	4166	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1200.80695656661	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTTGGTCTTACTCGGT	-102827930	False	NA	-4	True	ATTAAA	-15	NA	102827948	102794385	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826845_102827591
transcript_155640.known	chr4	-	1087	8	FSM	ENSG00000109332.20	ENST00000321805.11	1087	8	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_7	1199.11567755712	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGGACAATAACTGCTTT	-102806631	True	NA	-66	True	NA	NA	NA	102827553	102797234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826845_102827426
transcript_155679.known	chr4	-	527	7	FSM	ENSG00000109332.20	ENST00000505207.5	527	7	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_6	1264.18533275606	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTACTGTTCCTTTTTTG	-102825762	False	4107	-29	True	AATAAA	-5	NA	102825780	102797366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102825721
transcript_155681.known	chr4	-	660	7	FSM	ENSG00000109332.20	ENST00000357194.10	660	7	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_6	1262.99454560272	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTTTTGATTTTCTTAT	-102868201	True	NA	-19	True	AATAAA	-15	NA	102868896	102797356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102868714
transcript_155688.known	chr4	-	1977	7	FSM	ENSG00000109332.20	ENST00000503742.5	1977	7	0	0	0	0	multi-exon	FALSE	canonical	3	1801	junction_6	517.445890891019	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGCATGTGTATTATGTG	-102827548	False	NA	18	True	TTTAAA	-9	NA	102827566	102797150	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102802639_102809671_102809704_102809791_102809856_102826484_102826637_102827426
transcript_155703.known	chr4	+	883	2	FSM	ENSG00000246560.3	ENST00000501133.3	1351	2	444	24	-233	-24	multi-exon	FALSE	canonical	2	10	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAAGTTTGCAGTCCACT	102828033	False	NA	-21	True	NA	NA	NA	102828054	102844075	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_102828186_102843323
transcript_155705.known	chr4	-	1184	9	FSM	ENSG00000164037.17	ENST00000504216.5	1184	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.02715934252836	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTAATGAATTATTTCAC	-103019586	True	NA	9	True	ATTAAA	-29	NA	103019666	102901087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_102901333_102905513_102905651_102906535_102906645_102910438_102910589_102911430_102911538_102912007_102912130_102932123_102932300_102991642_102991713_103019598
transcript_155706.known	chr4	+	471	4	FSM	ENSG00000145354.12	ENST00000574446.1	471	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	467.761572693706	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CACATAATAAACACAATGAA	102860353	True	NA	NA	False	NA	NA	NA	102869053	102887359	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_102869188_102882770_102882874_102885215_102885431_102887340
transcript_155710.known	chr4	+	5878	3	FSM	ENSG00000145354.12	ENST00000273986.10	5878	3	0	0	0	0	multi-exon	FALSE	canonical	3	974	junction_1	23	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGATTTCCTGTAATT	102860291	True	NA	NA	False	AATAAA	-19	NA	102868991	102892807	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_102869188_102885215_102885431_102887340
transcript_155715.nic	chr4	+	367	2	ISM	ENSG00000145354.12	ENST00000273986.10	5878	3	-44	7465	-26	-2017	5prime_fragment	FALSE	canonical	3	974	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAATCCGAAAGTAGTGA	102860247	True	NA	NA	False	AATACA	-4	NA	102868947	102885342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_102869188_102885215
transcript_155716.known	chr4	+	852	4	FSM	ENSG00000145354.12	ENST00000646632.1	852	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	466.739994239	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGCTATGGATCCAAAG	102860273	True	NA	NA	False	AATAAA	-34	NA	102868973	102887681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_102869188_102882791_102882874_102885215_102885431_102887340
transcript_155721.known	chr4	-	6351	12	FSM	ENSG00000164038.16	ENST00000394785.9	6351	12	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_1	5.84369406545025	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGCTTGTTTTAAAATCC	-103076275	True	NA	NA	False	AATAAA	-22	NA	103076761	103022252	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_103026592_103028746_103028884_103031699_103031809_103043295_103043446_103044889_103044997_103047050_103047227_103048892_103049021_103050239_103050383_103057800_103057972_103066326_103066508_103067460_103067593_103076183
transcript_155724.nic	chr4	-	2962	11	NIC	ENSG00000164038.16	novel	6351	12	NA	NA	-19	466	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	6.18142378421024	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTGGTTCGTTAATACC	-103076768	False	NA	NA	False	AATAAA	-23	NA	103076780	103025489	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_103026592_103028746_103028884_103031699_103031809_103043295_103043446_103044889_103044997_103047050_103047227_103048892_103049021_103050239_103050383_103066326_103066508_103067460_103067593_103076183
transcript_155726.nnic	chr4	-	1128	11	NNC	ENSG00000164039.15	novel	2920	10	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_5	125.488007395129	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGCAGGAGAATAGTTTTT	-103096479	True	NA	-10	True	AATAAA	-13	NA	103099885	103079478	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_103079756_103082080_103082174_103082870_103082930_103085348_103085463_103085698_103085743_103086479_103086541_103091176_103091286_103092599_103092697_103095202_103095282_103096182_103096275_103099782
transcript_155729.nic	chr4	-	1231	11	NIC	ENSG00000164039.15	novel	2781	10	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_9	121.72612702292	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGCAGGAGAATAGTTTTT	-103096467	True	NA	-10	True	AATAAA	-13	NA	103099873	103079478	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_103079756_103082080_103082174_103082870_103082930_103085348_103085463_103086479_103086541_103091176_103091286_103092599_103092697_103095202_103095282_103096182_103096275_103098643_103098803_103099782
transcript_155730.known	chr4	-	1911	10	FSM	ENSG00000164038.16	ENST00000503103.5	1911	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.4899109094901	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTTGTTAAACATCATA	-103076320	False	NA	NA	False	NA	NA	NA	103076332	103025955	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_103026592_103031699_103031809_103043295_103043446_103044889_103044997_103047050_103047227_103048892_103049021_103050239_103050383_103066326_103066508_103067460_103067593_103076183
transcript_155731.known	chr4	-	1742	10	FSM	ENSG00000164039.15	ENST00000475058.5	1742	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	97.1799908277622	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTTGTAATCTCTTCT	-103096410	True	NA	35	True	NA	NA	NA	103099816	103079532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_103079756_103082080_103082174_103082870_103082930_103085348_103085463_103085698_103086541_103091176_103091286_103092599_103092697_103095202_103095282_103096182_103096275_103099782
transcript_155732.known	chr4	-	2920	10	FSM	ENSG00000164039.15	ENST00000296424.9	2920	10	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_9	24.504471751141	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGATCTGAGTTAGTCT	-103096428	True	NA	NA	False	AATAAA	-38	NA	103099834	103077591	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_103079756_103082080_103082174_103082870_103082930_103085348_103085463_103086479_103086541_103091176_103091286_103092599_103092697_103095202_103095282_103096182_103096275_103099782
transcript_155737.known	chr4	-	2046	9	FSM	ENSG00000164039.15	ENST00000492366.5	2046	9	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_8	24.8215506163495	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGGAGAATAGTTTTTAA	-103096422	True	NA	-8	True	AATAAA	-15	NA	103099828	103079476	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_103079756_103082080_103082174_103082870_103082930_103085348_103086541_103091176_103091286_103092599_103092697_103095202_103095282_103096182_103096275_103099782
transcript_155743.known	chr4	-	824	4	FSM	ENSG00000164038.16	ENST00000505838.1	824	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	9.17726659862414	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACCTCACATAGCTGTC	-103076324	False	NA	NA	False	NA	NA	NA	103076336	103065410	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_103065769_103066326_103066508_103067460_103067593_103076183
transcript_155747.known	chr4	-	8260	53	NNC	ENSG00000138778.14	novel	8541	49	NA	NA	36	-236	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	41.0888910467978	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGTGATAGCAATACCTT	-103196702	True	NA	-66	True	AATGAA	-19	NA	103198409	103106046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_103106317_103108802_103109090_103110827_103111012_103114454_103114553_103116576_103116690_103120147_103120334_103122870_103123090_103132692_103132897_103133694_103133893_103136140_103136172_103136279_103136360_103138350_103138450_103139788_103139942_103139942_103139952_103139952_103139962_103139962_103140080_103140255_103140415_103140813_103141105_103141749_103141909_103143247_103143407_103144330_103144619_103145049_103145335_103145522_103145682_103145828_103146108_103147355_103147647_103148843_103149000_103149117_103149409_103151218_103151378_103153046_103153251_103158299_103158459_103158613_103158887_103159009_103159325_103160624_103160780_103161085_103161252_103161334_103161458_103163136_103163257_103163478_103163554_103174735_103174904_103175959_103176049_103176898_103177047_103180310_103180470_103181336_103181457_103182761_103182892_103183200_103183289_103185809_103185862_103194228_103194295_103194373_103194442_103194602_103194685_103195113_103195234_103195919_103196039_103196162_103196253_103196758_103196851_103198263
transcript_155748.known	chr4	-	8742	47	FSM	ENSG00000138778.14	ENST00000380026.8	8742	47	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_31	37.5473236368098	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTGTGTGGATTTATT	NA	False	NA	NA	False	NA	NA	NA	103198445	103105348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_103106317_103108802_103109090_103110827_103111012_103114454_103114553_103116576_103116690_103120147_103120334_103122870_103123090_103132692_103132897_103133694_103133893_103136140_103136360_103138350_103138453_103140255_103140415_103140813_103141105_103141749_103141909_103143247_103143407_103144330_103144619_103145049_103145335_103145522_103145682_103145828_103146108_103147355_103147647_103148843_103149000_103149117_103149409_103151218_103151378_103153046_103153251_103158299_103158459_103158613_103158887_103159009_103159325_103160624_103160780_103161085_103161252_103161334_103161458_103163136_103163257_103174735_103174904_103175959_103176049_103176898_103177047_103180310_103180470_103181336_103181457_103182761_103182892_103183200_103183289_103185809_103185862_103194228_103194295_103194373_103194442_103194602_103194685_103195113_103195234_103195919_103196039_103196162_103196253_103196758_103196851_103198263
transcript_155758.nic	chr4	-	1660	16	ISM	ENSG00000138778.14	ENST00000265148.9	8541	49	-66	69002	36	2227	5prime_fragment	FALSE	canonical	3	31	junction_6	7.25227933518529	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAATTGAAATTAAAAGAA	-103196702	True	NA	NA	False	AAAAAG	-7	NA	103198409	103174812	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_103174904_103175959_103176049_103176898_103177047_103180310_103180470_103181336_103181457_103182761_103182892_103183200_103183289_103185809_103185862_103194228_103194295_103194373_103194442_103194602_103194685_103195113_103195234_103195919_103196039_103196162_103196253_103196758_103196851_103198263
transcript_15576.known	chr1	-	4559	22	FSM	ENSG00000198952.8	ENST00000361813.5	4559	22	0	0	0	0	multi-exon	TRUE	canonical	3	430	junction_17	45.6462291026599	1085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTCTCCTGGTGCCTG	-156271997	True	NA	-15	True	AATAAA	-15	NA	156282825	156249223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156250671_156250857_156250997_156251402_156251478_156252413_156252505_156252918_156253079_156253448_156253509_156259004_156259164_156260450_156260627_156261332_156261409_156263394_156263571_156265780_156266381_156266540_156266679_156267469_156267679_156268114_156268184_156268289_156268416_156272319_156272399_156273360_156273451_156274596_156274687_156277084_156277242_156277924_156278049_156278935_156279035_156282606
transcript_155764.nic	chr4	-	2041	10	NIC	ENSG00000138778.14	novel	8742	47	NA	NA	36	-5043	intron_retention	FALSE	canonical	3	38	junction_3	6.87094437055125	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAGGAAAAATGAGAAAT	-103196702	True	NA	NA	False	AAAACA	-21	NA	103198409	103182082	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_103183289_103185809_103185862_103194228_103194295_103194373_103194442_103194602_103194685_103195113_103195234_103195919_103196039_103196162_103196253_103196758_103196851_103198263
transcript_155768.known	chr4	+	881	4	FSM	ENSG00000248740.7	ENST00000656104.1	881	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	4.08248290463863	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTCTATTGTACTTAGT	103255555	True	NA	7	True	AATAAA	-16	NA	103255825	103453755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_103256295_103343091_103343236_103436934_103437047_103453599
transcript_155769.known	chr4	-	5359	5	FSM	ENSG00000169836.5	ENST00000304883.3	5359	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	2.44948974278318	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTCTTACTACTTTCCTA	-103719835	True	NA	NA	False	ATTAAA	-20	NA	103719985	103586030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_103589995_103591486_103591684_103656193_103656345_103658214_103658404_103719127
transcript_155776.known	chr4	-	1177	13	FSM	ENSG00000138777.20	ENST00000509031.5	1177	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	209.071758016237	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTTGGACATTTATTG	-105468451	True	NA	-2	True	AATAAA	-21	NA	105474014	105369560	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105424195_105424323_105437949_105438037_105446382_105446503_105449349_105449404_105453597_105453643_105456247_105456292_105456680_105456746_105473893
transcript_155781.known	chr4	-	1665	12	FSM	ENSG00000138777.20	ENST00000341695.10	1665	12	0	0	0	0	multi-exon	TRUE	canonical	3	439	junction_6	44.8396592462779	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAACTGTTACTTTCATTT	-105468499	True	NA	-11	True	AATAAA	-18	NA	105474062	105369076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105424195_105424323_105437949_105438037_105446382_105446503_105449349_105449404_105453597_105453643_105456680_105456746_105473893
transcript_155782.nic	chr4	-	1110	11	NIC	ENSG00000138777.20	novel	1665	12	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_10	160.182520894135	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTCTCCTTTGGACATTT	-105468497	True	NA	-6	True	AATAAA	-17	NA	105474060	105369564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105424195_105424323_105437949_105438037_105446382_105446503_105449349_105449404_105453597_105453643_105473893
transcript_155784.known	chr4	-	1414	11	FSM	ENSG00000138777.20	ENST00000348706.9	1414	11	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_6	155.354562211736	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGATTTT	-105468501	True	NA	NA	False	NA	NA	NA	105474064	105369242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105424195_105424323_105446382_105446503_105449349_105449404_105453597_105453643_105456680_105456746_105473893
transcript_155787.known	chr4	-	1072	10	FSM	ENSG00000138777.20	ENST00000351450.10	1072	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_9	174.638674601781	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTCTCCTTTGGACATTT	-105468504	True	NA	-6	True	AATAAA	-17	NA	105474067	105369564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105424195_105424323_105437949_105438037_105446382_105446503_105449349_105449404_105473893
transcript_155791.known	chr4	-	859	8	FSM	ENSG00000138777.20	ENST00000432483.6	859	8	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_6	198.378734870902	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTCTCCTTTGGACATTT	-105468487	True	NA	-6	True	AATAAA	-17	NA	105474050	105369564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105424195_105424323_105456680_105456746_105473893
transcript_155793.known	chr4	-	667	6	FSM	ENSG00000138777.20	ENST00000354147.7	667	6	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_5	215.577920947392	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTCTCCTTTGGACATTT	-105468487	True	NA	-6	True	AATAAA	-17	NA	105474050	105369564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105473893
transcript_155794.known	chr4	-	631	5	FSM	ENSG00000138777.20	ENST00000499847.6	631	5	0	0	0	0	multi-exon	FALSE	canonical	3	495	junction_3	31.8070353852729	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGTCTATACTCAAGTT	-105468496	True	NA	0	True	AATAAA	-18	NA	105474059	105446201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_105446503_105449349_105449404_105453597_105453643_105456680_105456746_105473893
transcript_155795.known	chr4	+	4043	12	FSM	ENSG00000138780.15	ENST00000394730.7	4043	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	30.3009696269043	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATTTCTCCTAAGATTT	105705576	True	NA	9	True	AATAAA	-21	NA	105708783	105847725	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_105709017_105717592_105717779_105719059_105719528_105726578_105726831_105729405_105729500_105822953_105823070_105823230_105823276_105825671_105825801_105834460_105834595_105837858_105837890_105842064_105842135_105845440
transcript_155798.known	chr4	+	4304	12	FSM	ENSG00000138780.15	ENST00000515279.6	4304	12	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_3	10.00743525238	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATTTCTCCTAAGATTT	105705576	True	NA	9	True	AATAAA	-21	NA	105708783	105847725	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_105709017_105717592_105718040_105719059_105719528_105726578_105726831_105729405_105729500_105822953_105823070_105823230_105823276_105825671_105825801_105834460_105834595_105837858_105837890_105842064_105842135_105845440
transcript_155813.known	chr4	+	2228	6	FSM	ENSG00000138780.15	ENST00000484843.1	2228	6	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_3	10.4995237987254	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACCCAAA	105705579	True	NA	NA	False	TTTAAA	-3	NA	105708786	105823690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_105709017_105717592_105718040_105719059_105719528_105726578_105726831_105729405_105729500_105822953
transcript_155814.nic	chr4	+	1593	3	ISM	ENSG00000138780.15	ENST00000484843.1	2228	6	-13	103728	-4	403	5prime_fragment	FALSE	canonical	3	106	junction_1	11	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTCAGCTAAATTTTAT	105705566	True	NA	NA	False	ACTAAA	-3	NA	105708773	105719962	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_105709017_105717592_105718040_105719059
transcript_155818.known	chr4	-	3312	24	FSM	ENSG00000145348.17	ENST00000361687.8	3312	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	27.3748742994585	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGGGGATGTGTGTGTGT	-106313287	True	NA	NA	False	AATAAA	-31	NA	106316230	106046079	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_106046681_106095481_106095642_106116202_106116379_106171094_106171271_106193608_106193771_106194717_106194755_106212749_106212836_106230362_106230447_106231728_106231780_106232937_106233065_106233587_106233651_106235268_106235368_106236389_106236520_106236758_106236809_106242469_106242570_106244625_106244765_106247138_106247288_106248244_106248307_106248920_106248983_106250417_106250479_106251865_106252008_106295093_106295167_106308767_106308990_106315930
transcript_155819.known	chr4	+	1665	9	FSM	ENSG00000164022.18	ENST00000672911.1	1665	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	313.993630508646	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATCCTCTCCTTTTCAA	106308609	True	NA	NA	False	NA	NA	NA	106316577	106348077	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_106316595_106320865_106320890_106321176_106321452_106324984_106325119_106327450_106327565_106328075_106328244_106331671_106331884_106336868_106337038_106347525
transcript_155820.known	chr4	+	1607	8	FSM	ENSG00000164022.18	ENST00000672337.1	1607	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	290.788933905045	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACCAAAAGACATTAGAGAAA	106308581	True	NA	-37	True	AATAAA	-12	NA	106316549	106347704	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_106316595_106320865_106321452_106324984_106325119_106327450_106327565_106328075_106328244_106331671_106331884_106336868_106337038_106347525
transcript_155823.known	chr4	+	2773	7	FSM	ENSG00000164022.18	ENST00000672341.1	2773	7	0	0	0	0	multi-exon	FALSE	canonical	3	558	junction_1	64.0947649101617	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTAGCATCATCAGTAG	106308581	True	NA	42	True	AATAAA	-28	NA	106316549	106349456	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_106316595_106324984_106325119_106327450_106327565_106328075_106328244_106331671_106331884_106336868_106337038_106347525
transcript_155828.known	chr4	+	2710	7	FSM	ENSG00000164022.18	ENST00000673123.1	2710	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	250.272129668665	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATATGTCATTCTTTTGGG	106308586	True	NA	-34	True	AATGAA	-24	NA	106316554	106349183	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_106316810_106324984_106325119_106327450_106327565_106328075_106328244_106331671_106331884_106336868_106337038_106347525
transcript_155829.known	chr4	+	1396	7	FSM	ENSG00000164022.18	ENST00000673018.1	1396	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	249.179096679923	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACATTAGAGAAAACCTTAA	106312508	False	NA	-30	True	AATAAA	-19	NA	106320476	106347711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_106320890_106324984_106325119_106327450_106327565_106328075_106328244_106331671_106331884_106336868_106337038_106347525
transcript_155831.known	chr4	+	2359	6	FSM	ENSG00000164022.18	ENST00000442366.6	2359	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	261.880583472697	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTCTGGTGACAAAGTC	106308579	True	NA	-9	True	NA	NA	NA	106316547	106349208	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_106316595_106324984_106325119_106327450_106327565_106331671_106331884_106336868_106337038_106347525
transcript_155834.nic	chr4	+	1068	5	ISM	ENSG00000164022.18	ENST00000672337.1	1607	8	-46	19486	-19	-3512	5prime_fragment	FALSE	canonical	3	17	junction_1	308.073854781609	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCGAAAGAGAAAATTGAAAA	106308535	True	NA	NA	False	GATAAA	-26	NA	106316503	106328218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_106316595_106320865_106321452_106324984_106325119_106327450_106327565_106328075
transcript_155835.known	chr4	+	568	5	FSM	ENSG00000164022.18	ENST00000510207.5	568	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	275.140418695618	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTCCCGTCTGGATCT	106315493	True	NA	NA	False	AAAACA	-38	NA	106315543	106331730	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_106315637_106324984_106325119_106327450_106327565_106328075_106328244_106331671
transcript_155836.nic	chr4	+	606	4	ISM	ENSG00000164022.18	ENST00000684504.1	1101	7	-156	19553	-143	-3512	5prime_fragment	FALSE	canonical	3	558	junction_1	47.0744091837593	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCGAAAGAGAAAATTGAAAA	106316362	True	NA	NA	False	GATAAA	-26	NA	106316379	106328218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_106316595_106324984_106325119_106327450_106327565_106328075
transcript_155840.known	chr4	+	2001	1	FSM	ENSG00000164022.18	ENST00000682186.1	2001	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTAAAATTACTATATTC	106308554	True	NA	NA	False	AAGAAA	-10	NA	106316522	106318523	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_106316500_106318500
transcript_155841.known	chr4	+	1101	7	FSM	ENSG00000164022.18	ENST00000684504.1	1101	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	232.320002008724	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTGGCTCATTTTTGC	106308567	True	NA	30	True	AATAAA	-31	NA	106316535	106347771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_106316595_106324984_106325119_106327450_106327565_106328075_106328244_106331671_106331884_106336868_106337042_106347530
transcript_155842.known	chr4	+	2408	6	FSM	ENSG00000164022.18	ENST00000394701.6	2408	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	272.934864024368	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTTGTGAGTTTTTTGC	106308581	True	NA	8	True	AATAAA	-17	NA	106316549	106349225	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_106316595_106327450_106327565_106328075_106328244_106331671_106331884_106336868_106337038_106347525
transcript_155846.known	chr4	-	2513	12	FSM	ENSG00000138801.9	ENST00000265174.5	2513	12	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_6	37.3358666987759	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTGATCTATTTTATA	-107716537	True	NA	-8	True	AATAAA	-21	NA	107720234	107613665	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_107614388_107631630_107631861_107644801_107645071_107653490_107653627_107654694_107654901_107656895_107657008_107659958_107660073_107682014_107682134_107687038_107687178_107693770_107694007_107701170_107701286_107720119
transcript_155866.nnic	chr4	-	1246	6	NNC	ENSG00000138801.9	novel	579	5	NA	NA	-168	-10550	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	148.654498754663	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAAAGATGATTTGTGTT	-107720366	False	NA	-28	True	AATAAA	-41	NA	107720402	107670509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_107670864_107682014_107682134_107687038_107687178_107693770_107694007_107701170_107701286_107720119
transcript_155868.known	chr4	+	4768	5	FSM	ENSG00000155016.18	ENST00000332884.11	4768	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	8.45576726264388	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTGTCATGTCTGTTTT	107931276	True	NA	NA	False	ATTAAA	-14	NA	107931548	107953461	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_107932134_107944969_107945606_107947375_107947538_107949349_107949518_107950244
transcript_155876.known	chr4	+	1752	9	FSM	ENSG00000138796.18	ENST00000403312.6	1752	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	147.958978690041	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGTAATACACTCAAATGA	107983083	True	NA	-29	True	TATAAA	-1	NA	107989895	108035118	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_107990065_108009758_108009888_108014430_108014589_108019539_108019667_108023473_108023564_108027687_108027761_108028860_108028870_108033175_108033293_108034238
transcript_155877.known	chr4	+	1895	9	FSM	ENSG00000138796.18	ENST00000640060.1	1895	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	143.160748810559	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAATCACTGTTGCAAAT	107983089	True	NA	-44	True	NA	NA	NA	107989901	108035022	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_107990065_108004663_108004918_108009758_108009888_108014430_108014589_108019539_108019667_108023473_108023564_108027687_108027761_108033175_108033293_108034238
transcript_155879.known	chr4	+	1803	8	FSM	ENSG00000138796.18	ENST00000309522.8	1803	8	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_3	29.4465964215956	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTATTTCTCCTCTTCTTTG	107983076	True	NA	24	True	AGTAAA	-21	NA	107989888	108035171	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_107990065_108009758_108009888_108014430_108014589_108019539_108019667_108023473_108023564_108027687_108027761_108033175_108033293_108034238
transcript_155883.known	chr4	+	1507	7	FSM	ENSG00000138796.18	ENST00000639698.1	1507	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	125.001333326222	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAAATTGTAATACACTC	107983240	False	NA	-35	True	NA	NA	NA	107990052	108035112	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_107990065_108009758_108009888_108014430_108014589_108019539_108019667_108023473_108023564_108033175_108033293_108034238
transcript_155885.known	chr4	-	1488	11	FSM	ENSG00000138795.10	ENST00000438313.6	1488	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.79164728671689	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGAGCATCTTGCATCCA	-108167762	False	NA	NA	False	NA	NA	NA	108167798	108048416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_108048752_108063622_108063664_108064335_108064385_108070662_108070771_108078219_108078383_108079491_108079615_108083355_108083447_108089124_108089258_108163567_108163702_108165096_108165164_108167554
transcript_155888.known	chr4	+	853	6	FSM	ENSG00000109475.17	ENST00000394668.2	853	6	0	0	0	0	multi-exon	FALSE	canonical	3	562	junction_5	11285.2901885596	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTCTCTATGTGACCA	108452974	True	NA	39	True	TATAAA	-25	NA	108620655	108630412	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_108620713_108621950_108622025_108622104_108622205_108622514_108622619_108625127_108625254_108630020
transcript_155890.known	chr4	+	549	6	FSM	ENSG00000109475.17	ENST00000506397.5	549	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	11991.0725558642	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTATGACTTTTTTTT	108452951	True	NA	13	True	AATAAA	-40	NA	108620632	108625252	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_108620713_108621630_108621697_108621950_108622025_108622104_108622205_108622514_108622619_108625127
transcript_155891.known	chr4	+	546	5	FSM	ENSG00000109475.17	ENST00000394667.8	546	5	0	0	0	0	multi-exon	FALSE	canonical	3	12803	junction_1	5372.7122282419	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTTTGGTTTGG	108452894	True	NA	131	True	NA	NA	NA	108620575	108625370	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_108620601_108621950_108622025_108622104_108622205_108622514_108622619_108625127
transcript_155893.known	chr4	+	529	5	FSM	ENSG00000109475.17	ENST00000394665.5	529	5	0	0	0	0	multi-exon	FALSE	canonical	3	2424	junction_1	9656.2793171076	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATGACTTTTTTTTTTT	108452908	True	NA	16	True	AATAAA	-43	NA	108620589	108625255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_108620713_108621950_108622025_108622104_108622205_108622514_108622619_108625127
transcript_155901.known	chr4	+	1062	4	FSM	ENSG00000198856.13	ENST00000361564.9	1062	4	0	0	0	0	multi-exon	FALSE	canonical	3	2286	junction_3	106.220943739401	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTTTATATTTGTTTTT	108622903	True	NA	18	True	AATAAA	-17	NA	108650598	108667820	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_108650795_108655563_108655658_108657449_108657648_108667246
transcript_155905.known	chr4	+	876	3	FSM	ENSG00000198856.13	ENST00000613215.4	876	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	1246	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACCTTTTATATTTGTTT	108622889	True	NA	16	True	AATAAA	-15	NA	108650584	108667818	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_108650795_108655563_108655658_108667246
transcript_155908.known	chr4	-	2086	13	FSM	ENSG00000164089.9	ENST00000296486.8	2086	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	2.782634642844	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAACAAAAAAAATTACTAG	-108762927	True	NA	NA	False	AATAAA	-14	NA	108763053	108742052	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_108742613_108743788_108743857_108746398_108746530_108746761_108746852_108748004_108748160_108749237_108749464_108750935_108751019_108752894_108753012_108754619_108754711_108756417_108756493_108759748_108759909_108760187_108760307_108762842
transcript_15591.nnic	chr1	-	4455	21	NIC	ENSG00000198952.8	novel	4559	22	NA	NA	-34	0	combination_of_known_splicesites	FALSE	canonical	3	56	junction_11	109.195455491518	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTCTCCTGGTGCCTG	-156272031	True	NA	-15	True	AATAAA	-15	NA	156282859	156249223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_156250671_156250857_156250997_156251402_156251478_156252413_156252505_156252918_156253079_156253448_156253509_156259004_156259164_156260450_156260627_156261332_156261409_156263394_156263571_156265780_156266381_156267469_156267679_156268114_156268184_156268289_156268416_156272319_156272399_156273360_156273451_156274596_156274687_156277084_156277242_156277924_156278049_156278935_156279035_156282606
transcript_155913.known	chr4	+	5083	24	FSM	ENSG00000138802.11	ENST00000265175.5	5083	24	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	24.6222116823112	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAATATATATGAATCAATA	109431236	True	NA	NA	False	NA	NA	NA	109433814	109540896	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_109434003_109462900_109463645_109473003_109473187_109481676_109481782_109491326_109491408_109494614_109494857_109506327_109506513_109510008_109510112_109511956_109512084_109513746_109513857_109516527_109516641_109520365_109520485_109521116_109521173_109521419_109521627_109524817_109524942_109525345_109525505_109526225_109526400_109527321_109527433_109530288_109530465_109531384_109531523_109532638_109532744_109533592_109533686_109538492_109538597_109539560
transcript_155916.known	chr4	+	3780	23	FSM	ENSG00000138802.11	ENST00000399100.6	3780	23	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	19.3476780164468	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGATCTATAACCTAGG	109431234	True	NA	NA	False	AATAAA	-11	NA	109433812	109539696	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_109434003_109462900_109463645_109473003_109473187_109491326_109491408_109494614_109494857_109506327_109506513_109510008_109510112_109511956_109512084_109513746_109513857_109516527_109516641_109520365_109520485_109521116_109521173_109521419_109521627_109524817_109524942_109525345_109525505_109526225_109526400_109527321_109527433_109530288_109530465_109531384_109531523_109532638_109532744_109533592_109533686_109538492_109538597_109539560
transcript_155917.nic	chr4	+	4526	23	NIC	ENSG00000138802.11	novel	4066	25	NA	NA	4	-445	combination_of_known_junctions	FALSE	canonical	3	34	junction_5	24.6866310392106	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAGTATGGTTTGGTGAT	109431240	True	NA	1	True	ATTAAA	-12	NA	109433818	109540451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_109434003_109462900_109463645_109473003_109473187_109491326_109491408_109494614_109494857_109506330_109506513_109510008_109510112_109511956_109512084_109513746_109513857_109516527_109516641_109520365_109520485_109521116_109521173_109521419_109521627_109524817_109524942_109525345_109525505_109526225_109526400_109527321_109527433_109530288_109530465_109531384_109531523_109532638_109532744_109533592_109533686_109538492_109538597_109539560
transcript_155920.known	chr4	-	957	3	FSM	ENSG00000247950.8	ENST00000499359.2	957	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	3	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATCACTTATGTTGATG	-109433649	True	NA	NA	False	AATAAA	-24	NA	109433817	109429962	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_109430781_109431691_109431747_109433733
transcript_155926.known	chr4	+	2230	8	FSM	ENSG00000005059.16	ENST00000394650.7	2230	8	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_4	33.3839751365587	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAATACAAGTTAAATCAG	109558027	True	NA	86	True	AATAAA	-18	NA	109560245	109688719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_109560437_109659010_109659087_109660194_109660366_109664289_109664395_109682581_109682743_109684442_109684647_109685250_109685368_109687514
transcript_155933.known	chr4	-	1634	7	FSM	ENSG00000138794.10	ENST00000265164.7	1634	7	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_2	32.3625297733866	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTATTACATTTTTCTA	-109698229	True	NA	-26	True	AATAAA	-15	NA	109703445	109688627	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_109689569_109690849_109691010_109694524_109694701_109696409_109696487_109697621_109697769_109698299_109698343_109703355
transcript_155942.known	chr4	-	1347	4	FSM	ENSG00000138794.10	ENST00000352981.7	1347	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	191.942699783034	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACATTTTTCTAACTCAC	-109698203	True	NA	-20	True	AATAAA	-21	NA	109703419	109688621	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_109689569_109690849_109691010_109694524_109694701_109703355
transcript_155949.known	chr4	-	5219	4	FSM	ENSG00000123739.11	ENST00000243501.10	5219	4	0	0	0	0	multi-exon	FALSE	canonical	3	408	junction_3	60.3176775267601	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTAGTGTCATCTTTTAT	-109724255	True	NA	-5	True	AATAAA	-13	NA	109730070	109709988	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_109714496_109717547_109717714_109718682_109718760_109729601
transcript_155955.known	chr4	-	755	3	FSM	ENSG00000123739.11	ENST00000507961.1	755	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	236.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATAATTTATATCTTG	-109724141	True	NA	11	True	CATAAA	-37	NA	109729956	109714261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_109714496_109717547_109717714_109729601
transcript_155960.known	chr4	-	1189	4	FSM	ENSG00000123739.11	ENST00000502283.1	1189	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	231.155551282873	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACGGACTTTTTTTTTCT	-109724159	True	NA	-11	True	AATACA	-16	NA	109729974	109713916	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_109714496_109717547_109717714_109718688_109718760_109729601
transcript_155961.known	chr4	+	1011	7	FSM	ENSG00000109534.17	ENST00000394631.7	1011	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	146.820090208694	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAGAGTGTGTTTATTAA	109812511	True	NA	21	True	AATAAA	-21	NA	109815509	109824740	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_109815546_109816152_109816379_109817935_109818091_109819000_109819061_109822346_109822489_109823964_109824034_109824417
transcript_155962.known	chr4	+	1015	7	FSM	ENSG00000109534.17	ENST00000226796.7	1015	7	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	73.5746031061142	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTTAGAGTGTGTTTAT	109813084	True	NA	18	True	AATAAA	-18	NA	109815761	109824737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_109815805_109816152_109816379_109817935_109818091_109819000_109819061_109822346_109822489_109823964_109824034_109824417
transcript_155968.nic	chr4	+	636	3	ISM	ENSG00000109534.17	ENST00000506840.5	831	5	-126	4517	-1	-1538	5prime_fragment	FALSE	canonical	3	215	junction_1	69	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGGAAAAGTGGATGAAATA	109812510	True	NA	NA	False	AAAACA	-10	NA	109815508	109818049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_109815805_109816152_109816379_109817935
transcript_155971.known	chr4	-	6454	5	FSM	ENSG00000170522.10	ENST00000394607.7	6454	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	153.812182547417	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTTTCTGTTTTCTCTT	-110183725	True	NA	0	True	AATAAA	-27	NA	110198653	110045845	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_110051763_110059602_110059755_110105496_110105629_110198246_110198368_110198521
transcript_155972.known	chr4	-	610	5	FSM	ENSG00000170522.10	ENST00000506625.5	610	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	131.744070075279	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTCCTGCACTGGTATC	-110198892	False	NA	NA	False	NA	NA	NA	110199009	110051725	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_110051763_110059602_110059755_110105496_110105629_110198246_110198368_110198841
transcript_155979.known	chr4	-	6570	4	FSM	ENSG00000170522.10	ENST00000302274.8	6570	4	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_3	6.16441400296898	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTTTCTGTTTTCTCTT	-110183687	True	NA	0	True	AATAAA	-27	NA	110198615	110045845	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_110051763_110059602_110059755_110105496_110105629_110198246
transcript_155985.nic	chr4	-	627	3	NIC	ENSG00000170522.10	novel	204	2	NA	NA	-6	322	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	20	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCGAGTGGAGCCACGCCA	-110183693	True	NA	-19	True	AATAAA	-12	NA	110198621	110197568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_110197975_110198246_110198368_110198521
transcript_155990.known	chr4	-	448	2	FSM	ENSG00000250103.3	ENST00000513690.3	602	2	145	9	-43	-9	multi-exon	FALSE	canonical	3	25	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCACTACATTTCTAAATTA	-110615089	False	NA	-14	True	AATAAA	-19	NA	110615458	110595512	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_110595809_110615306
transcript_155995.known	chr4	-	1608	3	FSM	ENSG00000164093.18	ENST00000645131.1	1608	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	21	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTGGATTCTTTCTCC	-110621723	False	NA	-2	True	AGTAAA	-17	NA	110621734	110617422	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_110618689_110621163_110621370_110621598
transcript_155996.known	chr4	-	2294	3	FSM	ENSG00000164093.18	ENST00000644743.1	2294	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	6.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTGGATTCTTTCTCC	-110622708	True	NA	-2	True	AGTAAA	-17	NA	110623077	110617422	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_110618689_110621163_110621370_110622255
transcript_155999.nnic	chr4	-	1764	2	NNC	ENSG00000164093.18	novel	1608	3	NA	NA	931	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTGGATTCTTTCTCC	-110619774	False	92	-2	True	AGTAAA	-17	NA	110619785	110617422	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_110618689_110619287
transcript_1560.known	chr1	+	840	7	FSM	ENSG00000157870.17	ENST00000493183.5	840	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	156.551109865117	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCCTTGCTCACTGTTGG	2586401	True	NA	47	True	NA	NA	NA	2586490	2589632	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_2586592_2587090_2587296_2587740_2587793_2588389_2588454_2588549_2588626_2588921_2589041_2589409
transcript_156000.known	chr4	-	1889	2	FSM	ENSG00000164093.18	ENST00000557119.2	1889	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCTTTGCTGTTAAAAAAA	-110623039	False	NA	NA	False	AAAACA	-28	NA	110623051	110620276	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_110621370_110622255
transcript_156006.known	chr4	-	2036	1	FSM	ENSG00000260526.1	ENST00000562919.1	2036	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTAACAGTAATTATTTCA	-112231410	False	186	NA	False	AATAAA	-23	NA	112231596	112229560	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_112229600_112231600
transcript_156009.known	chr4	+	5915	10	FSM	ENSG00000138660.12	ENST00000274000.10	5915	10	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_9	20.6062438098412	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGCATCTGATTCTTGA	112227910	True	NA	NA	False	AATAAA	-18	NA	112231786	112273110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_112232175_112253207_112253257_112254746_112254774_112257771_112257798_112260765_112260863_112262987_112263087_112265008_112265068_112265733_112265808_112266587_112266717_112268143
transcript_156012.known	chr4	-	4163	2	FSM	ENSG00000145365.11	ENST00000361717.4	4163	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCTTTGTTATTATTTTA	-112285692	True	NA	0	True	NA	NA	NA	112285904	112274536	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_112278435_112285639
transcript_156021.known	chr4	-	794	6	FSM	ENSG00000138658.16	ENST00000503172.5	794	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	21.3222888077242	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGAGAACATTGTGACTT	-112634024	True	NA	NA	False	AATATA	-9	NA	112636898	112619517	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_112619691_112620001_112620191_112623816_112623877_112631929_112632011_112633155_112633243_112636694
transcript_156037.known	chr4	+	2020	13	FSM	ENSG00000174720.17	ENST00000509622.5	2020	13	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_2	121.166552040294	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAAATGTGTTGATTTT	112635413	True	NA	17	True	AATAAA	-17	NA	112637126	112657586	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_112637240_112644667_112644769_112646350_112646452_112646587_112646672_112646790_112646956_112647033_112647128_112647198_112647550_112647689_112647835_112649534_112649687_112650460_112650583_112653076_112653237_112654067_112654160_112657246
transcript_156039.known	chr4	+	2107	13	FSM	ENSG00000174720.17	ENST00000344442.10	2107	13	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	96.0167809407409	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAAATGTGTTGATTTT	112635429	True	NA	17	True	AATAAA	-17	NA	112637142	112657586	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_112637240_112644667_112644872_112646350_112646452_112646587_112646672_112646790_112646956_112647033_112647128_112647198_112647550_112647689_112647835_112649534_112649687_112650460_112650583_112653076_112653237_112654067_112654160_112657246
transcript_156041.known	chr4	+	2164	13	FSM	ENSG00000174720.17	ENST00000324052.10	2164	13	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	112.186940961157	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTTGATTTTGTTTTT	112635742	False	NA	23	True	AATAAA	-23	NA	112637455	112657592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_112637604_112644667_112644872_112646350_112646452_112646587_112646672_112646790_112646956_112647033_112647128_112647198_112647550_112647689_112647835_112649534_112649687_112650460_112650583_112653076_112653237_112654067_112654160_112657246
transcript_156056.known	chr4	+	1047	7	FSM	ENSG00000174720.17	ENST00000505034.5	1047	7	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	140.094511749113	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAAGATGCAGAATCCCT	112635742	False	NA	NA	False	NA	NA	NA	112637455	112647449	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_112637604_112644667_112644872_112646350_112646452_112646587_112646672_112646790_112646956_112647033_112647128_112647198
transcript_156075.known	chr4	-	345	3	FSM	ENSG00000249532.6	ENST00000509938.2	389	3	41	3	0	2	multi-exon	FALSE	canonical	3	9509	junction_2	2432.5	1682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGTTTCTGTGCCAGTT	-112646290	True	NA	-16	True	AATAAA	-15	NA	112648699	112646722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_112646969_112647414_112647468_112648653
transcript_156078.known	chr4	+	424	2	FSM	ENSG00000174720.17	ENST00000504079.1	424	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGTGGCTCACGCCTGTA	112635479	False	NA	NA	False	ATTAAA	-19	NA	112637192	112638020	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_112637240_112637643
transcript_156082.known	chr4	-	294	2	FSM	ENSG00000249532.6	ENST00000505215.2	336	2	37	5	-3	0	multi-exon	FALSE	canonical	3	7130	junction_1	0	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATATTGTTTCTGTGCCAG	-112646294	True	NA	-18	True	AATAAA	-13	NA	112648703	112646724	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_112646969_112648653
transcript_156083.known	chr4	-	740	2	FSM	ENSG00000250046.3	ENST00000505632.1	740	2	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAAATATATTTTATATA	-112706197	True	NA	-28	True	TTTAAA	-8	NA	112706810	112693046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_112693686_112706709
transcript_156088.known	chr4	-	348	1	FSM	ENSG00000196656.7	ENST00000485827.1	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTGAGTTCTTAAAGAC	NA	False	NA	NA	False	NA	NA	NA	113214393	113214045	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_113214000_113214400
transcript_156089.known	chr4	-	1940	19	FSM	ENSG00000145349.18	ENST00000342666.9	1940	19	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	20.7269878344963	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTTTTTTTTTTTTTAA	-113760967	False	NA	NA	False	NA	NA	NA	113761068	113454104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_113454516_113455725_113455822_113457334_113457564_113460146_113460242_113465528_113465605_113500462_113500512_113509637_113509676_113513327_113513371_113513829_113513914_113515068_113515192_113517562_113517658_113531215_113531300_113537340_113537444_113548656_113548730_113552030_113552097_113609151_113609207_113661712_113661773_113759319_113759415_113761003
transcript_156090.known	chr4	-	5294	18	FSM	ENSG00000145349.18	ENST00000394524.7	5294	18	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	10.2548832152193	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTCATGGCTCTGTGGTC	-113761344	False	597	-5	True	AATAAA	-21	NA	113761445	113451031	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_113454516_113457334_113457564_113460146_113460242_113465528_113465605_113500462_113500512_113509637_113509676_113513327_113513371_113513829_113513914_113515068_113515192_113517562_113517658_113531215_113531300_113537340_113537444_113548656_113548730_113552030_113552097_113609151_113609207_113661712_113661773_113759319_113759415_113761003
transcript_156092.known	chr4	-	5820	18	FSM	ENSG00000145349.18	ENST00000296402.9	5820	18	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	15.3167253721077	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTCATGGCTCTGTGGTC	-113761826	False	NA	-5	True	AATAAA	-21	NA	113761927	113451031	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_113454516_113457290_113457564_113460146_113460242_113465528_113465605_113500462_113500512_113509637_113509676_113513327_113513371_113513829_113513914_113515068_113515192_113517562_113517658_113531215_113531300_113537340_113537444_113548656_113548730_113552030_113552097_113609151_113609207_113661712_113661773_113759319_113759415_113761003
transcript_156095.known	chr4	-	1642	17	FSM	ENSG00000145349.18	ENST00000379773.6	1642	17	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_16	8.15092019345055	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGATTCTCTGGAAAGATC	-113761029	False	NA	NA	False	AATAAA	-20	NA	113761130	113457187	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_113457564_113460146_113460242_113465528_113465605_113500462_113500512_113509637_113509676_113513327_113513371_113513829_113513914_113515068_113515192_113517562_113517658_113531215_113531300_113537340_113537444_113548656_113548730_113552030_113552097_113609151_113609207_113661712_113661773_113759319_113759415_113761003
transcript_1561.known	chr1	+	785	7	FSM	ENSG00000157870.17	ENST00000474659.5	785	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	153.444253358961	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCGGGCAGGGTGGCTGT	2586450	False	NA	73	True	NA	NA	NA	2586539	2589658	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_2586592_2587090_2587296_2587740_2587793_2588389_2588454_2588549_2588626_2588953_2589041_2589409
transcript_156104.known	chr4	-	4603	2	FSM	ENSG00000180801.14	ENST00000315366.8	4603	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTCCTGGTGGCACAT	-113979637	False	34	-7	True	AATAAA	-18	NA	113979647	113900283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_113903676_113978436
transcript_156110.known	chr4	+	3733	6	FSM	ENSG00000174607.11	ENST00000310836.11	3733	6	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	36.3262990132493	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGTTGTTGGAATAAAA	114598168	False	NA	NA	False	AATAAA	-17	NA	114598806	114678225	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_114598975_114622878_114623703_114663994_114664138_114665679_114665757_114668084_114668305_114675924
transcript_156115.nnic	chr4	+	3869	6	NNC	ENSG00000174607.11	novel	3733	6	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	83.0508278104439	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGTTGTTGGAATAAAA	114598115	True	NA	NA	False	AATAAA	-17	NA	114598753	114678225	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_+_114599058_114622878_114623703_114663994_114664138_114665679_114665757_114668084_114668305_114675924
transcript_156119.known	chr4	-	2023	1	FSM	ENSG00000174599.5	ENST00000310754.5	2023	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGAACTTAGTCTTTTTT	-117085415	True	NA	NA	False	ATTAAA	-18	NA	117085576	117083553	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_117083600_117085600
transcript_156120.known	chr4	-	4809	13	FSM	ENSG00000164099.3	ENST00000296498.3	4809	13	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	3.69966214673719	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGCCTTAAATTTTTGT	-118352993	False	NA	0	True	AATAAA	-22	NA	118353003	118280037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_118282244_118282830_118283112_118294938_118295062_118295777_118295857_118298732_118298939_118308435_118308578_118313200_118313398_118316181_118316324_118318377_118318557_118331715_118331867_118335472_118335652_118338175_118338315_118352218
transcript_156123.known	chr4	+	473	4	FSM	ENSG00000269893.9	ENST00000688996.1	528	4	49	6	0	0	multi-exon	FALSE	canonical	3	136	junction_1	269.148038571093	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCATTGTTCCTTGACTG	118267149	True	NA	18	True	AATAAA	-19	NA	118278754	118279821	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_118278793_118278943_118279138_118279388_118279432_118279623
transcript_156124.known	chr4	+	309	4	FSM	ENSG00000269893.9	ENST00000602483.6	353	4	41	3	0	-1	multi-exon	FALSE	canonical	3	46	junction_1	309.678327731643	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTCATTGTTCCTTGACT	118267149	True	NA	17	True	AATAAA	-18	NA	118278754	118279820	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_118278793_118279106_118279138_118279388_118279432_118279623
transcript_156125.nnic	chr4	+	475	4	FSM	ENSG00000269893.9	ENST00000685751.1	450	4	-27	2	0	0	multi-exon	FALSE	canonical	1	3	junction_1	329.211515931965	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCATTGTTCCTTGACTG	118267125	True	NA	18	True	AATAAA	-19	NA	118278730	118279821	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_118278793_118278965_118279138_118279388_118279432_118279623
transcript_156127.known	chr4	+	327	3	FSM	ENSG00000269893.9	ENST00000602520.6	335	3	4	4	1	0	multi-exon	FALSE	canonical	3	146	junction_1	318	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTGTTCCTTGACTGAG	118267103	True	NA	20	True	AATAAA	-21	NA	118278708	118279823	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_118278793_118279388_118279432_118279623
transcript_156128.known	chr4	+	6165	3	FSM	ENSG00000269893.9	ENST00000654083.2	6166	3	1	0	1	0	multi-exon	FALSE	canonical	3	573	junction_1	104.5	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCATGGAGAGTAATCAAG	118267103	True	NA	NA	False	AGTAAA	-38	NA	118278708	118285316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_118279138_118279388_118279432_118279623
transcript_156129.known	chr4	+	815	2	FSM	ENSG00000269893.9	ENST00000652022.2	818	2	0	3	0	-1	multi-exon	FALSE	canonical	3	573	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTCATTGTTCCTTGACT	118267149	True	NA	17	True	AATAAA	-18	NA	118278754	118279820	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_118279138_118279388
transcript_156130.known	chr4	+	131	1	FSM	ENSG00000275994.1	ENST00000384096.1	131	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGTTAAAAACCTAGAGGG	118279160	False	NA	NA	False	NA	NA	NA	118279189	118279320	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_118279200_118279300
transcript_156131.known	chr4	+	1105	1	FSM	ENSG00000269893.9	ENST00000667980.1	1105	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCATTGTTCCTTGACTGA	118267112	True	NA	19	True	AATAAA	-20	NA	118278717	118279822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_118278700_118279800
transcript_156134.nnic	chr4	+	2523	11	NNC	ENSG00000145388.15	novel	6642	11	NA	NA	-26	845	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	100.914072358616	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTTGAGAGTCTGTTTT	118681866	True	NA	2	True	AATGAA	-14	NA	118685365	118711446	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_+_118685601_118687922_118688012_118689369_118689458_118691531_118691613_118691980_118692069_118694435_118694527_118697181_118697324_118700549_118700643_118702885_118702936_118703934_118704052_118709997
transcript_156136.known	chr4	+	6625	11	FSM	ENSG00000145388.15	ENST00000628452.2	6625	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	70.8226658634084	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGCTCATAATTCATGAA	118681913	True	NA	NA	False	AATAAA	-20	NA	118685412	118715433	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_118685601_118687922_118688012_118689369_118689469_118691541_118691613_118691980_118692069_118694435_118694527_118697181_118697324_118700549_118700643_118703934_118704052_118705610_118705822_118709997
transcript_156150.known	chr4	-	4018	23	FSM	ENSG00000150961.15	ENST00000280551.11	4018	23	0	0	0	0	multi-exon	TRUE	canonical	3	300	junction_18	33.0961846444047	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTAGATTTATTTATTT	-118827149	True	NA	-1	True	AATAAA	-19	NA	118836126	118722822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_118723656_118728560_118728651_118731315_118731508_118732732_118732913_118738260_118738380_118739148_118739288_118740662_118740809_118740940_118741038_118743987_118744159_118744943_118745061_118751995_118752090_118752696_118752889_118757720_118757846_118764801_118764918_118768172_118768312_118797682_118797811_118805842_118805955_118815027_118815156_118815450_118815727_118817263_118817413_118824619_118824750_118833578_118833738_118835940
transcript_156151.nnic	chr4	-	3946	23	NNC	ENSG00000150961.15	novel	4018	23	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_22	82.6672109641727	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTAGATTTATTTATTT	-118827223	True	NA	-1	True	AATAAA	-19	NA	118836200	118722822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_118723656_118728560_118728651_118731315_118731508_118732732_118732913_118738260_118738380_118739148_118739288_118740662_118740809_118740940_118741038_118743987_118744159_118744943_118745061_118751995_118752090_118752696_118752889_118757720_118757846_118764801_118764918_118768172_118768312_118797682_118797811_118805842_118805955_118815027_118815156_118815450_118815727_118817263_118817413_118824619_118824750_118833578_118833738_118836086
transcript_156159.known	chr4	-	2786	20	FSM	ENSG00000150961.15	ENST00000419654.6	2786	20	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	85.418150224713	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTATGAAGATGGAGAGA	-118827194	True	NA	NA	False	NA	NA	NA	118836171	118736551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_118736570_118738260_118738380_118739148_118739288_118740662_118740809_118740940_118741038_118743987_118744159_118744943_118745061_118751995_118752090_118752696_118752889_118757720_118757846_118764801_118764918_118768172_118768312_118797682_118797811_118805842_118805955_118815027_118815156_118815450_118815727_118817263_118817413_118824619_118824750_118833578_118833738_118835940
transcript_156163.nic	chr4	-	2321	16	ISM	ENSG00000150961.15	ENST00000419654.6	2786	20	-13	4445	-13	-2893	5prime_fragment	FALSE	canonical	3	300	junction_11	29.0169299241361	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGATATTGAAAAGAAAATAG	-118827207	True	NA	NA	False	NA	NA	NA	118836184	118740996	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_118741038_118743987_118744159_118744943_118745061_118751995_118752090_118752696_118752889_118757720_118757846_118764801_118764918_118768172_118768312_118797682_118797811_118805842_118805955_118815027_118815156_118815450_118815727_118817263_118817413_118824619_118824750_118833578_118833738_118835940
transcript_156176.known	chr4	+	5936	19	FSM	ENSG00000145390.12	ENST00000692078.1	6631	19	-77	772	49	38	multi-exon	FALSE	canonical	2	4	junction_1	18.6472286359788	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTCTTGGCCAAATTTT	119209542	True	NA	6	True	TATAAA	-21	NA	119212635	119294746	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_119212874_119214069_119214223_119217549_119217674_119235289_119235412_119239217_119239904_119245336_119245430_119248747_119248883_119256245_119256360_119256440_119256524_119259819_119259926_119260506_119260654_119261714_119261865_119267319_119267483_119268267_119268421_119269690_119269838_119271295_119272035_119273631_119273709_119291164_119291262_119292337
transcript_156180.known	chr4	-	2671	2	FSM	ENSG00000164096.13	ENST00000504110.2	2671	2	0	0	0	0	multi-exon	FALSE	canonical	3	2479	junction_1	0	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCTGTTGATTCTCTTTC	-119284346	True	NA	NA	False	AATAAA	-15	NA	119300645	119296418	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_119298780_119300335
transcript_156183.known	chr4	-	939	2	FSM	ENSG00000283050.3	ENST00000635323.2	1137	2	2	196	2	-3	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACATTAAGCTTGTATACA	-119453859	True	NA	NA	False	AATAAA	-16	NA	119454628	119449569	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_119450126_119454245
transcript_156184.known	chr4	-	6959	21	FSM	ENSG00000138735.16	ENST00000354960.8	6959	21	0	0	0	0	multi-exon	TRUE	canonical	3	69	junction_6	6.90362223763728	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGAATACTGTGTGATT	-119626975	True	NA	-7	True	AATAAA	-16	NA	119628804	119494402	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_119498739_119501169_119501254_119502580_119502656_119504535_119504600_119505854_119505933_119507603_119507705_119511046_119511135_119519044_119519140_119520934_119521061_119525548_119525696_119538959_119539020_119542458_119542635_119552549_119552638_119553637_119553747_119560295_119560364_119562832_119562971_119565320_119565411_119567072_119567145_119596522_119596613_119606708_119607298_119628519
transcript_156186.nic	chr4	-	3005	20	ISM	ENSG00000138735.16	ENST00000354960.8	6959	21	-35	6420	-35	0	5prime_fragment	FALSE	canonical	3	69	junction_5	6.77333864083956	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTCTCATTGTCATAAT	-119627010	True	NA	-5	True	AATAAA	-15	NA	119628839	119500822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_119501254_119502580_119502656_119504535_119504600_119505854_119505933_119507603_119507705_119511046_119511135_119519044_119519140_119520934_119521061_119525548_119525696_119538959_119539020_119542458_119542635_119552549_119552638_119553637_119553747_119560295_119560364_119562832_119562971_119565320_119565411_119567072_119567145_119596522_119596613_119606708_119607298_119628519
transcript_156200.nic	chr4	+	1476	9	FSM	ENSG00000245958.7	ENST00000686002.1	1438	9	-48	10	-25	0	multi-exon	TRUE	canonical	3	69	junction_7	23.5607592195158	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATAAATGTA	NA	False	NA	58	True	AATAAA	-22	NA	119454736	119499974	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_119455134_119460182_119460243_119460730_119460828_119461716_119461852_119462895_119462980_119493332_119493438_119494432_119494524_119497810_119497904_119499560
transcript_156212.known	chr4	-	5227	5	FSM	ENSG00000164109.14	ENST00000296509.11	5227	5	0	0	0	0	multi-exon	FALSE	canonical	3	1253	junction_1	75.2944221041639	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTGAAATGGAAACTGTC	-120048995	True	NA	-12	True	GATAAA	-17	NA	120066848	120055622	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_120060291_120060873_120060978_120061974_120062096_120065671_120065819_120066661
transcript_156214.known	chr4	-	1277	4	FSM	ENSG00000164109.14	ENST00000333047.9	1277	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	615.061153237808	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTGTCTTAAAACATTT	-120048980	True	NA	-22	True	AATAAA	-15	NA	120066833	120059436	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_120060291_120060873_120060978_120065671_120065819_120066661
transcript_156216.known	chr4	-	764	3	FSM	ENSG00000164109.14	ENST00000504707.1	764	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	626	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTGTGCTATAAAGCTAG	-120049005	True	NA	NA	False	NA	NA	NA	120066858	120059827	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_120060291_120060873_120060978_120066661
transcript_156218.known	chr4	-	5207	16	FSM	ENSG00000138738.11	ENST00000264808.8	5207	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_10	25.5281979169876	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGGTGTTAGCATTTTA	-120921543	True	NA	0	True	AATAAA	-20	NA	120922726	120691914	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_120695276_120710308_120710414_120754552_120754639_120777187_120777282_120781142_120781304_120784997_120785092_120798266_120798425_120799660_120799746_120811369_120811450_120816452_120816575_120816831_120816925_120818352_120818528_120821170_120821346_120853417_120853541_120907473_120907558_120922515
transcript_156219.known	chr4	-	2338	15	FSM	ENSG00000138738.11	ENST00000428209.6	2338	15	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_9	17.4700910596554	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCTCTGTAATGAAGTTT	-120922839	False	NA	-48	True	TATAAA	-36	NA	120922858	120694822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_120695276_120710308_120710414_120754552_120754639_120777187_120777282_120781142_120781304_120784997_120785092_120798266_120798425_120799660_120799746_120811369_120811450_120816452_120816575_120818352_120818528_120821170_120821346_120853417_120853541_120907473_120907558_120922515
transcript_156226.known	chr4	-	2259	14	FSM	ENSG00000138738.11	ENST00000515109.5	2259	14	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	22.8519806089424	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCTCTGTAATGAAGTTT	-120922846	False	NA	-48	True	TATAAA	-36	NA	120922865	120694822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_120695276_120710308_120710414_120777187_120777282_120781142_120781304_120784997_120785092_120798266_120798425_120799660_120799746_120811369_120811450_120816452_120816575_120818352_120818528_120821170_120821346_120853417_120853541_120907473_120907558_120922515
transcript_156237.known	chr4	-	2492	4	FSM	ENSG00000138738.11	ENST00000394435.2	2492	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	36.4264860903284	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAGAAAAAAC	-120922851	False	218	NA	False	NA	NA	NA	120922870	120837344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_120839275_120853417_120853541_120907473_120907558_120922515
transcript_156242.known	chr4	-	2902	4	FSM	ENSG00000173376.14	ENST00000379692.9	2902	4	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	2.94392028877595	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACCTTGGTGTATTCAAT	-121072415	True	NA	NA	False	ATTAAA	-36	NA	121072535	121035612	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_121037658_121039929_121040055_121045649_121045839_121071992
transcript_156244.known	chr4	-	2339	6	FSM	ENSG00000186867.11	ENST00000394427.3	2339	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.57681974534503	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATTGCTAGATTGAAT	-121380935	True	NA	NA	False	NA	NA	NA	121381018	121328641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_121329715_121330425_121330524_121332820_121333057_121336806_121336869_121340451_121340611_121380307
transcript_156247.known	chr4	-	1638	13	FSM	ENSG00000164111.15	ENST00000296511.10	1638	13	0	0	0	0	multi-exon	FALSE	canonical	3	2244	junction_4	170.52881395497	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTCTTTTTAAGCTAATAA	-121671536	True	NA	42	True	ATTAAA	-17	NA	121696980	121667945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_121668528_121669601_121669725_121669953_121670013_121671546_121671643_121672532_121672627_121677893_121677951_121678414_121678495_121681670_121681762_121683363_121683478_121684676_121684772_121686287_121686373_121696580_121696625_121696862
transcript_156256.known	chr4	-	868	6	FSM	ENSG00000164111.15	ENST00000513428.5	868	6	0	0	0	0	multi-exon	FALSE	canonical	3	2304	junction_1	140.903655027114	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCCTCCTTTAAAAATA	-121671548	True	NA	NA	False	NA	NA	NA	121696992	121681361	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_121681762_121683363_121683478_121684676_121684772_121686287_121686373_121696580_121696625_121696862
transcript_156261.known	chr4	+	1529	13	FSM	ENSG00000123737.13	ENST00000379663.7	1529	13	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_10	187.800037717426	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGAACCCTGGGTATT	121795973	True	NA	14	True	ATTAAA	-17	NA	121801319	121816909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_121801491_121801826_121801922_121802673_121802794_121802914_121803018_121804621_121804760_121807539_121807623_121809966_121810100_121811582_121811672_121813233_121813381_121813865_121814048_121816143_121816195_121816368_121816448_121816771
transcript_156265.known	chr4	+	1587	12	FSM	ENSG00000123737.13	ENST00000243498.10	1587	12	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_10	60.5629240426438	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCGTCTGTTAATTTGC	121795976	True	NA	13	True	AATAAA	-13	NA	121801322	121817021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_121801491_121801826_121801922_121802673_121802794_121802914_121803018_121804621_121804760_121807539_121807623_121809966_121810100_121811582_121811672_121813233_121813381_121813865_121814048_121816368_121816448_121816771
transcript_156280.known	chr4	+	1317	11	FSM	ENSG00000123737.13	ENST00000509980.5	1317	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_10	174.390481391617	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGCATTGGAAAAATGGAG	121795971	True	NA	NA	False	AATATA	-14	NA	121801317	121815403	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_121801491_121801826_121801922_121802673_121802794_121802914_121803018_121804621_121804760_121807539_121807623_121809966_121810100_121811582_121811672_121813233_121813381_121813865_121814048_121815349
transcript_156284.known	chr4	-	2748	8	FSM	ENSG00000145386.11	ENST00000274026.10	2748	8	0	0	0	0	multi-exon	FALSE	canonical	3	776	junction_6	56.4113897892897	301	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTTGGATTCTTGTCT	-121807770	True	NA	-10	True	AATAAA	-20	NA	121823883	121816443	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_121817687_121818043_121818178_121818799_121818914_121819371_121819580_121820541_121820766_121820978_121821092_121822402_121822647_121823415
transcript_156288.known	chr4	+	757	7	FSM	ENSG00000123737.13	ENST00000509800.5	757	7	0	0	0	0	multi-exon	FALSE	canonical	1	56	junction_4	198.158185969358	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAAGTAAGGTAAGTAAC	121795999	True	NA	NA	False	NA	NA	NA	121801345	121811660	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_121801491_121801826_121801922_121802673_121802794_121802914_121803018_121807539_121807623_121809966_121810100_121811582
transcript_156297.known	chr4	+	3882	11	FSM	ENSG00000123737.13	ENST00000513654.5	3882	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	182.930150603994	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCGTCTGTTAATTTGC	121795976	True	NA	13	True	AATAAA	-13	NA	121801322	121817021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_121801491_121801826_121801922_121802673_121802794_121802914_121803018_121804621_121804760_121807539_121807623_121809966_121810074_121811582_121811672_121813233_121813381_121813865_121816448_121816771
transcript_156298.known	chr4	-	3840	19	FSM	ENSG00000138686.10	ENST00000264499.9	3840	19	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	63.2667535026528	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACACATAAGAAAACGGAG	-121867272	True	NA	NA	False	NA	NA	NA	121870474	121824328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_121825994_121828145_121828270_121828401_121828506_121828618_121828729_121833230_121833396_121835143_121835284_121839630_121839697_121843926_121844002_121845503_121845697_121847403_121847507_121848843_121848929_121852955_121853087_121854703_121854821_121855488_121855562_121858991_121859179_121861503_121861680_121863216_121863280_121867980_121868047_121870277
transcript_1563.known	chr1	+	2827	7	FSM	ENSG00000157870.17	ENST00000444521.6	2827	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	147.329185461975	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTTGTGCTTTCTTCTT	2586660	False	NA	18	True	AATAAA	-18	NA	2586749	2591467	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_2586949_2587090_2587296_2587740_2587793_2588335_2588454_2588549_2588626_2588921_2589041_2589409
transcript_156303.known	chr4	-	2570	18	FSM	ENSG00000138686.10	ENST00000506636.1	2570	18	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_12	63.8638798986512	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTGTGTCAATTTAT	-121867248	True	NA	-2	True	AATAAA	-13	NA	121870450	121827726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_121828270_121828401_121828506_121828618_121828729_121833230_121833396_121835143_121835284_121839630_121839697_121843926_121844002_121845503_121845697_121847403_121847507_121848843_121848929_121852955_121853087_121854703_121854821_121855488_121855562_121858991_121859179_121861503_121861680_121863216_121863280_121867980_121868047_121870277
transcript_156308.known	chr4	-	725	4	FSM	ENSG00000138686.10	ENST00000502444.1	725	4	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_2	13.4412301024373	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTGACAACTTGGTTC	-121867285	True	NA	NA	False	TTTAAA	-24	NA	121870487	121861293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_121861680_121863216_121863280_121867980_121868047_121870277
transcript_156314.known	chr4	+	3238	2	FSM	ENSG00000181004.10	ENST00000314218.8	3238	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTACTGATATGTGGTGTTA	122732267	True	NA	2	True	AATAAA	-16	NA	122732703	122744939	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_122732885_122741882
transcript_156316.known	chr4	-	1227	5	FSM	ENSG00000170917.14	ENST00000304430.10	1227	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	40.4165807559224	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTTTGTTATTTTTCTT	-122921966	True	NA	65	True	TATAAA	-20	NA	122922597	122892576	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_122893226_122897623_122897679_122912567_122912624_122917500_122917705_122922334
transcript_156317.known	chr4	-	1065	5	FSM	ENSG00000170917.14	ENST00000339154.6	1065	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	20.017180121086	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGCTCTAGGTAAGCTT	-122922762	True	NA	-2	True	AATAAA	-19	NA	122922968	122892643	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_122893226_122897623_122897679_122912567_122912624_122917500_122917705_122922800
transcript_156326.nic	chr4	-	565	3	ISM	ENSG00000170917.14	ENST00000304430.10	1227	5	-19	19968	-19	-15019	5prime_fragment	FALSE	canonical	0	0	junction_2	49.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTCCTAAATGTTTATT	-122921985	True	NA	NA	False	AATAAA	-24	NA	122922616	122912544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_122912624_122917500_122917705_122922334
transcript_156328.known	chr4	+	348	1	FSM	ENSG00000240775.1	ENST00000468797.1	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCTGAGTCCTTAAGGTC	122840331	False	NA	NA	False	ACTAAA	-11	NA	122840342	122840690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_122840300_122840700
transcript_156330.known	chr4	+	8116	16	FSM	ENSG00000145375.9	ENST00000274008.5	8116	16	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_15	9.62265844533389	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGTCCACATAGAAATTC	122919967	True	NA	4	True	ATTAAA	-19	NA	122923077	123319433	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_122923306_122927633_122927759_122929039_122929198_122933438_122933498_122934096_122934739_122935713_122935844_122936099_122936157_122938125_122938250_122947232_122947489_122979231_122979387_123028185_123028396_123056386_123056441_123057208_123057289_123090578_123090706_123256015_123256181_123313887
transcript_156335.nnic	chr4	+	2544	15	NNC	ENSG00000145375.9	novel	2492	15	NA	NA	-3	-6888	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_14	9.92959912461274	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAAGTCTGTTTCCTTTC	122919964	True	NA	NA	False	AGTAAA	-2	NA	122923074	123095405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_+_122923306_122927633_122927759_122929039_122929198_122933438_122933498_122934096_122934739_122935713_122935844_122936099_122936157_122938125_122938250_122947232_122947489_122979231_122979387_123028185_123028396_123056386_123056441_123057208_123057289_123090578_123090706_123095269
transcript_156336.known	chr4	+	2492	15	FSM	ENSG00000145375.9	ENST00000422835.2	2492	15	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_14	8.88704629428331	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGAAAAAAAAAAAAAAAAAG	122919990	True	NA	NA	False	NA	NA	NA	122923100	123102293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_122923306_122927633_122927759_122929039_122929198_122933438_122933498_122934096_122934739_122935713_122935844_122936099_122936157_122938125_122938250_122947232_122947489_122979231_122979387_123028185_123028396_123056386_123056441_123057208_123057289_123090578_123090706_123102183
transcript_156345.nic	chr4	+	3278	3	NIC	ENSG00000164056.11	novel	2608	3	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	188	junction_2	7.5	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGATTTCTTCATTTATT	123392012	True	NA	13	True	AATATA	-19	NA	123396781	123403760	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_123396933_123397610_123398514_123401536
transcript_156346.known	chr4	+	849	2	FSM	ENSG00000164056.11	ENST00000515726.1	849	2	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_1	0	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGCTCCTGGCCGGTGGCG	123392041	True	NA	NA	False	NA	NA	NA	123396810	123398337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_123396933_123397610
transcript_156347.known	chr4	+	2348	2	FSM	ENSG00000164056.11	ENST00000339241.1	2348	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTCTCTCGATTTCTT	123392031	True	NA	5	True	AATATA	-11	NA	123396800	123403752	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_123396933_123401536
transcript_156348.known	chr4	+	2352	2	FSM	ENSG00000164056.11	ENST00000622283.1	2352	2	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGATTTCTTCATTTATT	123398224	True	NA	13	True	AATATA	-19	NA	123398385	123403760	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_123398514_123401536
transcript_156349.known	chr4	+	1150	5	FSM	ENSG00000249464.7	ENST00000666490.1	1150	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.78535710713571	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTTTTCTTTTCTTTTC	NA	False	NA	NA	False	AATAAA	-15	NA	123600738	123877043	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_123600787_123652786_123652903_123661752_123661834_123829094_123829188_123876231
transcript_156350.known	chr4	-	8798	5	FSM	ENSG00000151458.12	ENST00000504087.6	8798	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	8.6421930087218	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCGTCACTTCTTCATGA	-124709617	True	NA	NA	False	AATAAA	-27	NA	124712732	124664047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_124667515_124668983_124672535_124678675_124678906_124709999_124711275_124712457
transcript_156353.known	chr4	+	3006	17	FSM	ENSG00000164066.13	ENST00000503952.5	3006	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	14.9117193844305	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTGTCAGAATTGCTGAA	127630929	True	NA	NA	False	NA	NA	NA	127632965	127716479	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_127633181_127643520_127644057_127656635_127656722_127663380_127663585_127669035_127669155_127674123_127674214_127684408_127684487_127685441_127685570_127687740_127687868_127700009_127700064_127704227_127704291_127705590_127705813_127706486_127706970_127708570_127708669_127710912_127711103_127713935_127714094_127716324
transcript_156356.known	chr4	+	13208	16	FSM	ENSG00000164066.13	ENST00000335251.11	13208	16	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	13.3908758322806	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTGCCTTTTTCATG	127630920	True	NA	11	True	AATAAA	-24	NA	127632956	127726737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_127633181_127643520_127644057_127656635_127656722_127663380_127663585_127669035_127669155_127674123_127674214_127684408_127684487_127687677_127687868_127700009_127700064_127704227_127704291_127705590_127705813_127706486_127706970_127708570_127708669_127710912_127711103_127713935_127714094_127716324
transcript_156369.nic	chr4	+	409	2	ISM	ENSG00000164066.13	ENST00000503952.5	3006	17	-23	72788	-14	-345	5prime_fragment	FALSE	canonical	3	41	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGAACCCAAACTCAAGC	127630906	True	NA	-25	True	AAGAAA	-8	NA	127632942	127643691	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_127633181_127643520
transcript_156370.known	chr4	+	10608	19	FSM	ENSG00000164070.12	ENST00000296464.9	10608	19	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_12	6.21725992601679	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCACACCTGAGGTTTA	127781883	True	NA	18	True	AATAAA	-29	NA	127782321	127840733	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_127782658_127794076_127794135_127795767_127795909_127798586_127798710_127801137_127801238_127801784_127801919_127803628_127803874_127804010_127804088_127805072_127805225_127805686_127805794_127807995_127808130_127811436_127811637_127818324_127818421_127820427_127820566_127822768_127822895_127823516_127823625_127827304_127827425_127830637_127830800_127832682
transcript_156373.nic	chr4	+	2126	14	ISM	ENSG00000164070.12	ENST00000508776.5	3020	20	320	12573	-181	0	internal_fragment	FALSE	canonical	3	21	junction_12	4.97449114283838	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGGAAAAGTCAAAAG	NA	False	NA	NA	False	ATTAAA	-11	NA	127782140	127820469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_127782658_127794076_127794135_127795767_127795909_127798586_127798710_127801137_127801238_127801784_127801919_127803628_127803874_127804010_127804088_127805072_127805225_127805686_127805794_127807995_127808130_127811436_127811637_127818324_127818421_127820427
transcript_156374.nic	chr4	+	3123	16	NIC	ENSG00000142731.11	novel	3838	16	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_5	48.5296701914292	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGTTGACTTTCAAGT	127877168	True	NA	NA	False	AATAAA	-5	NA	127880860	127898579	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_127881165_127881830_127881927_127883261_127883358_127883438_127883554_127885707_127886627_127887395_127887497_127889865_127890237_127891091_127891197_127891578_127891682_127892364_127892515_127893284_127893419_127893512_127893605_127893733_127893882_127894952_127895094_127896800_127896908_127898438
transcript_156375.nic	chr4	+	3611	16	NIC	ENSG00000142731.11	novel	3838	16	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_5	48.5296701914292	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACATTATCTTTTGATTC	127877168	True	NA	-1	True	AATAAA	-12	NA	127880860	127899067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_127881165_127881830_127881927_127883261_127883358_127883438_127883554_127885707_127886627_127887395_127887497_127889865_127890237_127891091_127891197_127891578_127891682_127892364_127892515_127893284_127893419_127893512_127893605_127893733_127893882_127894952_127895094_127896800_127896908_127898438
transcript_156377.known	chr4	+	3838	16	FSM	ENSG00000142731.11	ENST00000270861.10	3838	16	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_5	25.9909385919187	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGGTATATTTTAATGAA	127877200	True	NA	NA	False	AATACA	-23	NA	127880892	127899224	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_127881165_127881830_127881927_127883261_127883358_127883438_127883554_127885707_127886729_127887395_127887497_127889865_127890237_127891091_127891197_127891578_127891682_127892364_127892515_127893284_127893419_127893512_127893605_127893733_127893882_127894952_127895094_127896800_127896908_127898438
transcript_156397.known	chr4	+	5753	13	FSM	ENSG00000164074.16	ENST00000645843.2	5753	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	20.7583651143876	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTATCTCAATGTTGCTC	127963959	True	NA	NA	False	AATAAA	-16	NA	127965405	128039953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_127965607_127982938_127983048_127984338_127984424_127989720_127989822_128008919_128008999_128009106_128009192_128011672_128011701_128017362_128017502_128020079_128020170_128021136_128021239_128028474_128028854_128030509_128030673_128035761
transcript_1564.known	chr1	+	2765	7	FSM	ENSG00000157870.17	ENST00000378424.9	2765	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	144.307541960449	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTTGTGCTTTCTTCTT	2586690	False	NA	18	True	AATAAA	-18	NA	2586779	2591467	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_2586949_2587090_2587296_2587740_2587793_2588335_2588454_2588549_2588626_2588953_2589041_2589409
transcript_156404.known	chr4	-	4422	12	FSM	ENSG00000164073.11	ENST00000641686.2	4422	12	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	14.9853923362411	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTAAGCTTTAAAACTTTA	-127963113	True	NA	-11	True	AATAAA	-22	NA	127965173	127917804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_127920837_127921523_127921772_127921859_127921964_127930682_127930818_127932984_127933094_127938782_127938839_127939852_127939998_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965071
transcript_156409.known	chr4	-	4261	11	FSM	ENSG00000164073.11	ENST00000641025.1	4261	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	22.2488201934395	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTACATTGTGAATGTT	-127963111	True	NA	-66	True	NA	NA	NA	127965171	127917859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_127920837_127921523_127921772_127930682_127930818_127932984_127933094_127938782_127938839_127939852_127939998_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965071
transcript_156410.known	chr4	-	2303	11	FSM	ENSG00000164073.11	ENST00000642042.1	2303	11	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	11.9649488089168	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATGGAAACTACTTGCT	-127963120	True	NA	-13	True	AATAAA	-12	NA	127965180	127920617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_127921772_127921859_127921964_127930682_127930818_127932984_127933094_127938782_127938839_127939852_127939998_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965071
transcript_156414.known	chr4	-	4199	10	FSM	ENSG00000164073.11	ENST00000641690.1	4199	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	26.53485943871	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGATTATTTTGCATATG	-127963113	True	NA	-33	True	NA	NA	NA	127965173	127917826	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_127920837_127921523_127921772_127921859_127921964_127930682_127930818_127932984_127933094_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965071
transcript_156420.known	chr4	-	886	4	FSM	ENSG00000164073.11	ENST00000641140.1	886	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	7.58653778449403	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAAAACAAAAATAGATCC	-127963159	True	NA	NA	False	NA	NA	NA	127965219	127943390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_127943993_127949803_127949848_127957500_127957593_127965071
transcript_156423.known	chr4	+	3105	12	FSM	ENSG00000138709.19	ENST00000512292.5	3105	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_11	43.1405544472545	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGTGCTGATCTTATTC	128058985	True	NA	18	True	ATTAAA	-22	NA	128061285	128123869	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_128061402_128074459_128074519_128074933_128074994_128077787_128077963_128082164_128082306_128091000_128091145_128091346_128091513_128098185_128098331_128107138_128107314_128114569_128114743_128121825_128122189_128122481
transcript_156434.known	chr4	+	2151	10	FSM	ENSG00000138709.19	ENST00000394288.7	2151	10	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	19.9654021735255	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTTGTACATTTTTGTG	128059034	True	NA	12	True	AATAAA	-19	NA	128061334	128108901	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_128061402_128074459_128074519_128074933_128074994_128077787_128077963_128082164_128082306_128091000_128091145_128091346_128091513_128098185_128098331_128107138_128107314_128107882
transcript_156436.known	chr4	+	2563	10	FSM	ENSG00000138709.19	ENST00000648358.1	2563	10	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	29.8059568161868	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATTAACCATTTATGCAT	128061656	False	NA	-35	True	NA	NA	NA	128061693	128108854	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_128062220_128074459_128074519_128074933_128074994_128077787_128077963_128082164_128082306_128091000_128091145_128091346_128091513_128098185_128098331_128107138_128107314_128107882
transcript_156438.known	chr4	+	2707	9	FSM	ENSG00000138709.19	ENST00000432347.6	2707	9	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	21.1601039694988	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTTGTACATTTTTGTG	128059047	True	NA	12	True	AATAAA	-19	NA	128061347	128108901	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_128061402_128074459_128074519_128074933_128074994_128077787_128077963_128082164_128082306_128091000_128091145_128091346_128091513_128098185_128098331_128107138
transcript_15644.nic	chr1	-	1479	6	NIC	ENSG00000198715.13	novel	1611	6	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	155.535976545621	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTCTCTTGATGTGTG	-156291618	True	NA	-1	True	AATAGA	-20	NA	156295694	156292687	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_156293210_156293319_156293430_156294017_156294237_156294364_156294566_156294758_156295017_156295525
transcript_156441.nic	chr4	+	332	4	ISM	ENSG00000138709.19	ENST00000394288.7	2151	10	-92	31060	-43	-31013	5prime_fragment	FALSE	canonical	3	81	junction_1	17.326921891156	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGAAGGTTGAAAAGAG	128061204	False	NA	NA	False	AATAAA	-25	NA	128061242	128077841	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_128061402_128074459_128074519_128074933_128074994_128077787
transcript_156442.nic	chr4	+	1112	4	ISM	ENSG00000138709.19	ENST00000648358.1	2563	10	-413	31013	-5	-31013	5prime_fragment	FALSE	canonical	3	45	junction_1	34.2377309736236	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGAAGGTTGAAAAGAG	128058980	True	NA	NA	False	AATAAA	-25	NA	128061280	128077841	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_128062220_128074459_128074519_128074933_128074994_128077787
transcript_156443.known	chr4	-	3785	3	FSM	ENSG00000164040.18	ENST00000520121.6	3785	3	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_2	37	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGTTGAATGTTTCTCA	NA	False	NA	-4	True	AATAAA	-26	NA	128288829	128269241	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_128271414_128272361_128272518_128287372
transcript_156447.known	chr4	-	2987	21	FSM	ENSG00000151466.12	ENST00000281142.10	2987	21	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_9	12.8631255921724	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCTGTCATGTATTTTA	-129091021	True	NA	2	True	AATAAA	-18	NA	129093539	128883992	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_128884540_128888678_128888775_128891058_128891138_128936654_128936852_128942995_128943189_128946006_128946153_128948495_128948571_128952768_128952841_128957025_128957125_128959599_128959778_128965226_128965319_128970377_128970469_128992166_128992238_128997873_128997940_128999671_128999795_129003740_129003877_129039040_129039097_129043394_129043468_129043992_129044052_129082305_129082374_129093069
transcript_156453.known	chr4	-	2096	6	FSM	ENSG00000151466.12	ENST00000506368.5	2096	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	23.0008695487801	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTAGTTTTTCTCATTT	-129090859	False	NA	NA	False	AATAAA	-18	NA	129093377	129036594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_129038127_129039040_129039097_129043394_129043468_129043992_129044052_129082305_129082374_129093069
transcript_156455.known	chr4	-	1696	5	FSM	ENSG00000151466.12	ENST00000511426.5	1696	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	23.951774464536	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGTCAGAATCTGATTG	-129091027	True	NA	NA	False	AATAAA	-25	NA	129093545	129039192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_129040213_129043394_129043468_129043992_129044052_129082305_129082374_129093069
transcript_156456.known	chr4	-	1604	5	FSM	ENSG00000151466.12	ENST00000503401.1	1604	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	32.7900518450337	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTTATAAATAAAGAATAAG	-129091045	True	NA	NA	False	AGTAAA	-23	NA	129093563	129039229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_129040213_129043394_129043468_129043992_129044052_129082305_129082374_129093142
transcript_156471.known	chr4	+	5695	11	FSM	ENSG00000077684.16	ENST00000226319.11	5695	11	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_1	110.80703948757	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTGTCTTTTGAAAT	128804559	True	NA	13	True	AATAAA	-22	NA	128809699	128875224	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_128809878_128831732_128831811_128842952_128843039_128846374_128846533_128848979_128849168_128852056_128852269_128855629_128855798_128857337_128857455_128861703_128862226_128867855_128867974_128871354
transcript_156473.known	chr4	+	3000	11	FSM	ENSG00000077684.16	ENST00000512960.5	3000	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	195.662873330635	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGCAGAAACCCATTAAT	128804778	False	NA	NA	False	NA	NA	NA	128809918	128872334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_128810292_128831732_128831811_128842952_128843039_128846374_128846533_128848979_128849168_128852056_128852269_128855629_128855798_128857337_128857455_128861703_128862226_128867855_128867974_128871354
transcript_156475.known	chr4	+	5644	11	FSM	ENSG00000077684.16	ENST00000610919.4	5644	11	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	154.941408280679	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTGTCTTTTGAAAT	128808281	True	NA	13	True	AATAAA	-22	NA	128811269	128875224	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_128811397_128831732_128831811_128842952_128843039_128846374_128846533_128848979_128849168_128852056_128852269_128855629_128855798_128857337_128857455_128861703_128862226_128867855_128867974_128871354
transcript_15648.nnic	chr1	-	1445	6	NNC	ENSG00000198715.13	novel	1611	6	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_4	199.372014084224	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTCTCTTGATGTGTG	-156291611	True	NA	-1	True	AATAGA	-20	NA	156295687	156292687	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_156293210_156293319_156293577_156294017_156294237_156294364_156294566_156294675_156294760_156295525
transcript_15650.known	chr1	-	1611	6	FSM	ENSG00000198715.13	ENST00000362007.6	1611	6	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_4	66.1253355379011	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTCTCTTGATGTGTG	-156291603	True	NA	-1	True	AATAGA	-20	NA	156295679	156292687	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156293210_156293319_156293577_156294017_156294237_156294364_156294566_156294758_156295017_156295525
transcript_156500.known	chr4	+	3560	9	FSM	ENSG00000077684.16	ENST00000511647.5	3560	9	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_1	97.7864382212585	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGGCATTACTTACA	128804562	True	NA	7	True	AATAAA	-19	NA	128809702	128864081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_128809878_128831732_128831811_128842952_128843039_128846374_128846533_128848979_128849168_128852056_128852269_128855629_128855798_128857337_128857455_128861703
transcript_156507.known	chr4	+	4012	9	FSM	ENSG00000077684.16	ENST00000413543.6	4012	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	209.022090638765	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGTTTTCTCAAGTAAG	128808337	True	NA	11	True	AATAAA	-19	NA	128811325	128864630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_128811404_128831732_128831811_128842952_128843039_128846374_128846533_128848979_128849168_128852056_128852269_128855629_128855798_128857337_128857455_128861703
transcript_156518.known	chr4	+	567	6	FSM	ENSG00000077684.16	ENST00000504089.5	567	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	321.806525726251	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTGTCGCTATGACCTCA	128804703	False	NA	NA	False	NA	NA	NA	128809843	128849093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_128809878_128816366_128816464_128831732_128831811_128842952_128843039_128846374_128846533_128848979
transcript_156522.known	chr4	+	564	5	FSM	ENSG00000077684.16	ENST00000510308.5	564	5	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	213.433098417279	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACATGGATGCTGCATG	128808299	True	NA	NA	False	NA	NA	NA	128811287	128849112	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_128811397_128831732_128831811_128842952_128843039_128846374_128846533_128848979
transcript_156524.known	chr4	+	6170	6	FSM	ENSG00000151470.13	ENST00000281146.9	6170	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	17.4424768883321	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTTGAATTAGTTTTT	129093306	False	NA	NA	False	AATAAA	-22	NA	129093316	129116640	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_129094029_129102601_129102792_129106586_129106648_129109306_129109359_129109472_129109673_129111685
transcript_156526.known	chr4	+	5513	6	FSM	ENSG00000151470.13	ENST00000425929.6	5513	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	10.3266645147405	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTATGTTTTTGAATTAGTT	129095590	True	NA	NA	False	AATAAA	-19	NA	129096151	129116637	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_129096210_129102601_129102792_129106586_129106648_129109306_129109359_129109472_129109673_129111685
transcript_156529.nnic	chr4	+	629	2	Antisense	novelGene_ENSG00000251598.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	111	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCCCACTAAATATCTTTC	132123021	True	NA	NA	False	ATTAAA	-16	NA	132123770	132127577	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr4_+_132124000_132127177
transcript_156532.nnic	chr4	+	2200	2	Antisense	novelGene_ENSG00000251598.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	111	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATGAAATTAAATAATTCAA	132123021	True	NA	NA	False	AAAAAG	-4	NA	132123770	132129148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr4_+_132124000_132127177
transcript_156535.nnic	chr4	+	2849	2	Antisense	novelGene_ENSG00000251598.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	111	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTTATTTTCCACAGAA	132123021	True	NA	NA	False	AATAAA	-19	NA	132123770	132129797	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr4_+_132124000_132127177
transcript_156537.nnic	chr4	+	3269	2	Antisense	novelGene_ENSG00000251598.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	111	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTTGCAATTTTTTATT	132123021	True	NA	1	True	AATAAA	-15	NA	132123770	132130217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr4_+_132124000_132127177
transcript_156539.known	chr4	-	582	3	FSM	ENSG00000251598.2	ENST00000420721.2	582	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACCACCGAGCCTGACCA	-132123988	True	NA	NA	False	NA	NA	NA	132124031	132004809	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_132005075_132028345_132028482_132123850
transcript_156541.known	chr4	-	8044	9	FSM	ENSG00000250241.7	ENST00000667505.1	8044	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	3.57071421427143	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTATTTCTATTTTCTGG	-133148669	True	NA	NA	False	TTTAAA	-13	NA	133149147	133088669	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_133095951_133096735_133096884_133138959_133139034_133139825_133139882_133140585_133140660_133142710_133142783_133145603_133145746_133147198_133147277_133149028
transcript_156543.known	chr4	+	8510	5	FSM	ENSG00000138650.9	ENST00000264360.7	8510	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	3.89711431702997	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAATGCTGATTTAGTAAT	133148450	True	NA	97	True	AATAAA	-36	NA	133149293	133194700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_133152772_133154306_133154366_133154916_133155024_133162976_133163283_133190140
transcript_156548.known	chr4	+	4574	1	FSM	ENSG00000138650.9	ENST00000618019.1	4574	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGCTTATTGAGCGTG	133148471	True	NA	NA	False	AATAAA	-30	NA	133149314	133153888	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_133149300_133153900
transcript_156549.known	chr4	-	5102	4	FSM	ENSG00000189184.12	ENST00000412923.6	5102	4	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_3	48.3482735529983	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAAGGAACTGTCTATAAG	-137529442	True	NA	-22	True	AATAAA	-18	NA	137532459	137519702	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_137521697_137528477_137528642_137528731_137528818_137529601
transcript_156552.known	chr4	-	9645	12	FSM	ENSG00000151012.13	ENST00000280612.9	9645	12	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_7	5.03377025451168	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGTCGTCATGTTTTGC	-138240046	True	NA	NA	False	AATAAA	-20	NA	138242349	138164096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_138172018_138179216_138179395_138180640_138180791_138182296_138182394_138183201_138183306_138185120_138185245_138214584_138214630_138219265_138219366_138223198_138223325_138232266_138232383_138236324_138236452_138241792
transcript_15656.known	chr1	-	1365	5	FSM	ENSG00000198715.13	ENST00000612353.4	1365	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	159.73180647573	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTCTCTTGATGTGTGA	-156291613	True	NA	0	True	AATAGA	-21	NA	156295689	156292686	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156293210_156294017_156294237_156294364_156294566_156294758_156295017_156295525
transcript_156560.known	chr4	-	1965	7	FSM	ENSG00000109381.21	ENST00000510408.5	1965	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_6	39.9819403675654	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTCACTACGATATCAAG	-139083748	True	NA	NA	False	AAAAAG	-18	NA	139084325	139058718	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_139059608_139060323_139060675_139061864_139062058_139067683_139067771_139071865_139072004_139073453_139073568_139084132
transcript_156563.known	chr4	-	2766	6	FSM	ENSG00000109381.21	ENST00000379549.7	2766	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	56.2458887386447	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAGAAATGAAATTTATCT	-139083760	True	NA	-34	True	NA	NA	NA	139084337	139057878	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_139059608_139060323_139060675_139061864_139062058_139071865_139072040_139073453_139073568_139084132
transcript_156567.known	chr4	-	611	5	FSM	ENSG00000109381.21	ENST00000512627.1	611	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	55.1197559863975	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACATAGTGGTCATAGAT	-139084206	False	NA	NA	False	NA	NA	NA	139084224	139060600	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_139060675_139061864_139062058_139071865_139072004_139073453_139073568_139084132
transcript_156569.known	chr4	-	2219	4	FSM	ENSG00000109381.21	ENST00000514606.1	2219	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	28.1780056072107	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGACATTGAACACATTCA	-139083761	True	NA	NA	False	AAGAAA	-44	NA	139084338	139066009	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_139067771_139071865_139072004_139073453_139073568_139084132
transcript_156573.nic	chr4	-	638	3	ISM	ENSG00000109381.21	ENST00000514606.1	2219	4	-181	5857	-23	-5857	5prime_fragment	FALSE	canonical	3	56	junction_2	18	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAGAGTATATTTATACAT	-139084495	True	NA	NA	False	AAAAAG	-7	NA	139084519	139071866	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_139072004_139073453_139073568_139084132
transcript_156574.nic	chr4	-	575	3	ISM	ENSG00000109381.21	ENST00000379549.7	2766	6	-83	13988	76	-5857	5prime_fragment	FALSE	canonical	3	56	junction_2	13.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAGAGTATATTTATACAT	-139084402	False	NA	NA	False	AAAAAG	-7	NA	139084420	139071866	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_139072040_139073453_139073568_139084132
transcript_156575.known	chr4	-	1434	3	FSM	ENSG00000109381.21	ENST00000511006.1	1434	3	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTGTGAACCCGAGAGGC	-139175099	True	NA	NA	False	NA	NA	NA	139177218	139136770	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_139137868_139139412_139139498_139176966
transcript_156578.known	chr4	+	1962	3	FSM	ENSG00000151014.6	ENST00000280614.4	1962	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	3	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGCTTGTGTTGTTTTC	139009623	True	NA	23	True	ATTAAA	-32	NA	139015780	139045939	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_139016172_139043073_139043344_139044638
transcript_156579.known	chr4	+	6072	20	FSM	ENSG00000164134.13	ENST00000398947.1	6072	20	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_17	81.1238921192529	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTTTGGAAAAGATTAC	139295351	True	NA	-8	True	AATAAA	-1	NA	139301587	139391368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_139301832_139334173_139334259_139336847_139336953_139340911_139341070_139342825_139342961_139344185_139344340_139349461_139349582_139351190_139351287_139351504_139351612_139354025_139354099_139357385_139357556_139359742_139359896_139360499_139360629_139361723_139361938_139370210_139370405_139376364_139376474_139378755_139378855_139384834_139384979_139386132_139386231_139387883
transcript_156582.nic	chr4	+	2220	15	ISM	ENSG00000164134.13	ENST00000296543.10	6174	20	-106	21086	-106	-9037	5prime_fragment	FALSE	canonical	3	334	junction_8	24.2176567396432	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGCAGAAAAAGAAAAGCAGC	NA	False	NA	-10	True	AAGAAA	-27	NA	139301398	139370298	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_139301832_139334173_139334259_139336847_139336953_139340911_139341070_139342825_139342961_139344185_139344340_139349461_139349582_139351190_139351287_139351504_139351612_139354025_139354099_139357385_139357556_139359742_139359896_139360499_139360629_139361723_139361938_139370210
transcript_156587.known	chr4	-	1257	6	FSM	ENSG00000109390.13	ENST00000544855.5	1257	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	2046.3555311822	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTAGAAAATGTTAATTC	-139301194	False	NA	-11	True	AATAAA	-40	NA	139301210	139289916	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295961_139297384_139297444_139300601
transcript_156588.known	chr4	-	1198	5	FSM	ENSG00000109390.13	ENST00000539002.5	1198	5	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_4	1780.41573445642	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTAGAAAATGTTAATTC	-139301194	False	NA	-11	True	AATAAA	-40	NA	139301210	139289916	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295961_139300601
transcript_156589.known	chr4	-	664	5	FSM	ENSG00000109390.13	ENST00000394225.6	664	5	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_4	1766.58659213184	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTGTATTCTTCAGATA	-139301517	True	NA	-47	True	AATAAA	-14	NA	139302526	139289952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295961_139302415
transcript_15659.known	chr1	-	1364	5	FSM	ENSG00000198715.13	ENST00000622703.4	1364	5	0	0	0	0	multi-exon	TRUE	canonical	3	125	junction_4	136.694001331441	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTCTCTTGATGTGTGA	-156291613	True	NA	0	True	AATAGA	-21	NA	156295689	156292686	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156293210_156293319_156293577_156294017_156294237_156294364_156294566_156295525
transcript_156590.known	chr4	-	1224	4	FSM	ENSG00000137463.5	ENST00000398955.2	1224	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	6.34209919681348	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGCTTCTACTTTTTTC	-139279890	True	NA	-11	True	AATAAA	-13	NA	139280225	139266164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_139267042_139268671_139268766_139275288_139275393_139280076
transcript_156594.known	chr4	-	725	5	FSM	ENSG00000109390.13	ENST00000539387.5	725	5	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_4	1766.58659213184	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTAGAAAATGTTAATTC	-139302535	False	NA	-11	True	AATAAA	-40	NA	139302551	139289916	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295961_139302415
transcript_156596.known	chr4	-	696	6	FSM	ENSG00000109390.13	ENST00000394223.2	696	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_5	2044.88640271287	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATATTGTGACAACTTGTA	-139301468	True	NA	-25	True	AATAAA	-36	NA	139302477	139289930	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295961_139297384_139297444_139302415
transcript_156597.known	chr4	-	627	3	FSM	ENSG00000273247.6	ENST00000609359.1	627	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACATGGTACTGGCATTA	-139453716	True	NA	NA	False	NA	NA	NA	139454034	139413823	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_139414025_139415936_139416013_139453684
transcript_156599.known	chr4	+	4248	2	FSM	ENSG00000172007.7	ENST00000305626.6	4248	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACTGTCCTTGAAGAACT	139453501	True	NA	NA	False	NA	NA	NA	139454120	139476609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_139454445_139472685
transcript_156601.known	chr4	-	6808	8	FSM	ENSG00000145391.14	ENST00000274031.8	6808	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	4.76380914300945	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCATTGTCTTCCTTTG	-139555712	True	NA	-2	True	ATTAAA	-16	NA	139556219	139506037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_139511844_139517884_139518043_139520276_139520395_139523353_139523436_139529030_139529221_139533164_139533367_139546919_139547050_139556097
transcript_156603.known	chr4	-	1590	3	FSM	ENSG00000145391.14	ENST00000404104.7	1590	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATGGTTGGAAATTAATG	NA	False	NA	NA	False	ATTAAA	-20	NA	139556769	139532578	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_139533367_139546919_139547050_139556097
transcript_156605.known	chr4	-	1602	8	FSM	ENSG00000145391.14	ENST00000506866.6	1602	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.24336382383205	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAAACCCAGGTTATTAG	-139555731	True	NA	NA	False	AATAAA	-15	NA	139556238	139495940	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_139496522_139517884_139518043_139520276_139520395_139523353_139523436_139529030_139529221_139533164_139533367_139546919_139547050_139556097
transcript_156606.known	chr4	+	740	5	FSM	ENSG00000085871.9	ENST00000265498.6	740	5	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_3	5.76085931090146	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTGAAATGGCTTTGTA	139665175	True	NA	19	True	AATAAA	-21	NA	139665818	139704243	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_139666078_139678542_139678643_139695196_139695268_139703454_139703537_139704015
transcript_156607.known	chr4	+	634	4	FSM	ENSG00000085871.9	ENST00000506797.5	634	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	63.0396700498979	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGTCTTTATTCTGTTT	139665191	True	NA	0	True	AATAAA	-2	NA	139665834	139704224	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_139666078_139678542_139678643_139703454_139703537_139704015
transcript_156608.known	chr4	+	4995	4	FSM	ENSG00000153130.18	ENST00000608372.6	4995	4	0	0	0	0	multi-exon	FALSE	canonical	3	603	junction_3	15.06283137026	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGTGGTGATTGTCAT	140370431	True	NA	NA	False	AATAAA	-20	NA	140373645	140385728	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_140373718_140379120_140379193_140379568_140379653_140380961
transcript_156609.known	chr4	+	1838	3	FSM	ENSG00000153130.18	ENST00000506597.2	1838	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	292.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGAGGTTGTGTGTGTTT	140370321	True	NA	20	True	AATAAA	-8	NA	140373535	140382545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_140373718_140379120_140379193_140380961
transcript_156610.known	chr4	-	2011	5	FSM	ENSG00000196951.12	ENST00000512692.7	2011	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	14.4395290781937	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGAGTCTTTTTATCCA	-140373239	True	NA	NA	False	ATTAAA	-16	NA	140373384	140283723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_140285269_140291389_140291530_140293260_140293424_140369309_140369351_140373262
transcript_156611.known	chr4	-	2725	15	FSM	ENSG00000153132.13	ENST00000325617.10	2725	15	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	5.96246764420263	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCTATTTGACAGGTTAT	-140427382	True	NA	-1	True	AATAAA	-25	NA	140427648	140388452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_140389305_140390627_140390729_140392218_140392379_140392585_140392712_140393825_140394042_140395818_140395970_140396091_140396206_140398850_140399041_140400356_140400550_140401984_140402067_140405941_140406084_140409836_140409896_140410552_140410627_140412934_140413088_140427536
transcript_156613.known	chr4	+	4399	9	FSM	ENSG00000179387.10	ENST00000323570.8	4399	9	0	0	0	0	multi-exon	TRUE	canonical	3	180	junction_1	25.3660698571931	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGCCTTCCTGTTGATA	140520857	True	NA	12	True	AATAAA	-18	NA	140524167	140553770	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_140524281_140525419_140525571_140527465_140527495_140535732_140535831_140537411_140537542_140540167_140540302_140542573_140542643_140543452_140543587_140550229
transcript_156619.known	chr4	-	1621	6	FSM	ENSG00000109424.4	ENST00000262999.4	1621	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.8	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTCTTTTGAGATCTAT	-140568908	True	NA	NA	False	AATAAA	-22	NA	140568961	140559430	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_140560011_140562192_140562374_140563109_140563212_140563317_140563519_140567778_140567978_140568603
transcript_156621.known	chr4	-	5554	21	FSM	ENSG00000109436.8	ENST00000442267.3	5554	21	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	1.57718102955875	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGCTTTTTATCTTTGTG	-140756359	True	NA	NA	False	AATAAA	-19	NA	140756385	140620781	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_140622918_140624115_140624220_140624313_140624389_140627440_140627528_140628299_140628366_140633947_140634189_140639085_140639155_140639329_140639429_140657096_140657227_140657526_140657813_140659587_140659706_140661892_140662108_140668916_140669068_140669633_140669805_140670719_140670927_140676893_140677102_140678941_140679204_140679614_140679844_140686343_140686463_140701503_140701615_140755915
transcript_156624.known	chr4	-	10432	7	FSM	ENSG00000170153.11	ENST00000515673.7	10432	7	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_6	3.89087250997625	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTGTCTGTGTCATCT	-141133123	True	NA	NA	False	AATAAA	-12	NA	141133469	140859806	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_140868380_140911143_140911355_140925976_140926074_140947653_140947737_140949300_140949373_140967622_140967874_141132324
transcript_156627.known	chr4	+	1891	10	FSM	ENSG00000109445.11	ENST00000262990.9	1891	10	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_8	23.8394837958862	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTTGACATTATATTTA	141216954	True	NA	19	True	AATAAA	-19	NA	141220894	141234697	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_141221109_141222365_141222492_141224486_141224507_141224606_141224678_141226766_141226847_141229570_141229698_141230165_141230271_141231438_141231486_141232524_141232643_141233714
transcript_156636.known	chr4	+	733	2	FSM	ENSG00000109445.11	ENST00000514826.5	733	2	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTACCTGTGCTAAGTG	141216946	True	NA	NA	False	NA	NA	NA	141220886	141222876	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_141221109_141222365
transcript_156644.known	chr4	+	2472	8	FSM	ENSG00000164136.17	ENST00000296545.11	2472	8	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	6.87497680886627	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGTAATACTCACTGAG	141636489	False	NA	NA	False	TATAAA	-16	NA	141636601	141733987	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_141637225_141656185_141656308_141719365_141719477_141720468_141720567_141721923_141722009_141727939_141727985_141729846_141729985_141732737
transcript_156645.known	chr4	+	2015	8	FSM	ENSG00000164136.17	ENST00000320650.9	2015	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	6.23027499638758	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGTAATACTCACTGAG	141636470	True	NA	NA	False	TATAAA	-16	NA	141636582	141733987	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_141636749_141656185_141656308_141719365_141719477_141720468_141720567_141721923_141722009_141727939_141727985_141729846_141729985_141732737
transcript_15665.known	chr1	+	2191	4	FSM	ENSG00000163472.19	ENST00000295694.9	2191	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	2.62466929133727	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGGCTCTTTTTTCCT	156282735	True	NA	13	True	AATAAA	-13	NA	156282947	156292443	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156283066_156285183_156285984_156286259_156286474_156291384
transcript_156652.known	chr4	+	7081	10	FSM	ENSG00000170185.11	ENST00000307017.9	7081	10	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	6.51114903288161	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTAAATATTCCTGAAGTA	143183756	True	NA	112	True	NA	NA	NA	143184916	143223874	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_143186133_143187825_143187962_143195715_143195846_143197822_143197925_143203407_143203567_143206032_143206227_143209563_143209658_143212317_143212425_143213580_143214944_143220294
transcript_156654.known	chr4	+	4135	9	FSM	ENSG00000170185.11	ENST00000510377.5	4135	9	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	6.87386354243376	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATTTTTTTTTTGTTTTTG	143183756	True	NA	NA	False	AATAAA	-32	NA	143184916	143215577	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_143186133_143187825_143187962_143195715_143195846_143197822_143197925_143203407_143203567_143206032_143206227_143209563_143209658_143212317_143212425_143213580
transcript_156655.known	chr4	+	4618	10	FSM	ENSG00000170185.11	ENST00000683224.1	4618	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	13.9584922600129	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAGAGTTTTACATTTG	143183806	True	NA	4	True	ATTAAA	-14	NA	143184966	143221487	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_143186133_143187825_143187936_143195715_143195846_143197822_143197925_143203407_143203567_143206032_143206227_143209563_143209658_143212317_143212425_143213580_143214944_143220294
transcript_156657.known	chr4	+	7981	11	FSM	ENSG00000109458.9	ENST00000262995.8	7981	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	10.8300507847378	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTTGAACCTCATTCAA	143336751	False	NA	NA	False	AGTAAA	-19	NA	143336761	143474568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_143337261_143415476_143415772_143433490_143433717_143437998_143438601_143439801_143439888_143440078_143440383_143457679_143457770_143459384_143459479_143460363_143460488_143466102_143466226_143469030
transcript_156658.known	chr4	+	2648	10	FSM	ENSG00000109458.9	ENST00000262994.9	7774	10	11	5115	11	43	multi-exon	FALSE	canonical	3	16	junction_1	5.99588336143646	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTATTACTGTATTTATGC	143336790	True	NA	NA	False	NA	NA	NA	143336886	143469450	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_143337261_143415476_143415772_143433490_143433717_143437998_143438601_143439801_143439888_143440078_143440383_143459384_143459479_143460363_143460488_143466102_143466226_143469030
transcript_156664.known	chr4	+	7684	24	FSM	ENSG00000153147.6	ENST00000283131.4	7684	24	0	0	0	0	multi-exon	FALSE	canonical	3	1216	junction_1	162.28607847422	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTCATGTGATTATTT	143504196	True	NA	9	True	ATTAAA	-16	NA	143513701	143557486	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_143514102_143517354_143517430_143521428_143521596_143524366_143524468_143525450_143525552_143526280_143526461_143527867_143528024_143528582_143528715_143530457_143530527_143534854_143534965_143536451_143536679_143538589_143538712_143538785_143538939_143540362_143540496_143543508_143543658_143543852_143543973_143544736_143544848_143545469_143545584_143545924_143546048_143546775_143546909_143547384_143547504_143547927_143548141_143549996_143550105_143553118
transcript_156666.nic	chr4	+	3507	23	ISM	ENSG00000153147.6	ENST00000283131.4	7684	24	-249	7440	-249	1828	5prime_fragment	FALSE	canonical	3	1216	junction_1	163.360632592408	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATGGAACTAGAAGAAAAGG	143513409	False	NA	20	True	NA	NA	NA	143513452	143550046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_143514102_143517354_143517430_143521428_143521596_143524366_143524468_143525450_143525552_143526280_143526461_143527867_143528024_143528582_143528715_143530457_143530527_143534854_143534965_143536451_143536679_143538589_143538712_143538785_143538939_143540362_143540496_143543508_143543658_143543852_143543973_143544736_143544848_143545469_143545584_143545924_143546048_143546775_143546909_143547384_143547504_143547927_143548141_143549996
transcript_156672.nic	chr4	+	3313	22	ISM	ENSG00000153147.6	ENST00000283131.4	7684	24	-253	9494	-253	-226	5prime_fragment	FALSE	canonical	3	1216	junction_1	162.486336421896	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATACTGAAGAAGAAGATC	143513405	False	NA	NA	False	NA	NA	NA	143513448	143547992	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_143514102_143517354_143517430_143521428_143521596_143524366_143524468_143525450_143525552_143526280_143526461_143527867_143528024_143528582_143528715_143530457_143530527_143534854_143534965_143536451_143536679_143538589_143538712_143538785_143538939_143540362_143540496_143543508_143543658_143543852_143543973_143544736_143544848_143545469_143545584_143545924_143546048_143546775_143546909_143547384_143547504_143547927
transcript_15668.nic	chr1	-	1118	4	NIC	ENSG00000198715.13	novel	1365	5	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	193.046338708842	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTCTCTTGATGTGTGA	NA	False	NA	0	True	AATAGA	-21	NA	156295700	156292686	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_156293210_156294017_156294237_156294364_156294566_156295525
transcript_156682.nic	chr4	+	2907	19	ISM	ENSG00000153147.6	ENST00000283131.4	7684	24	-242	11517	-242	1613	5prime_fragment	FALSE	canonical	3	1216	junction_1	155.323249156059	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAACAGCTTAAAATTGA	143513416	False	NA	NA	False	NA	NA	NA	143513459	143545969	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_143514102_143517354_143517430_143521428_143521596_143524366_143524468_143525450_143525552_143526280_143526461_143527867_143528024_143528582_143528715_143530457_143530527_143534854_143534965_143536451_143536679_143538589_143538712_143538785_143538939_143540362_143540496_143543508_143543658_143543852_143543973_143544736_143544848_143545469_143545584_143545924
transcript_156684.nic	chr4	+	2827	18	ISM	ENSG00000153147.6	ENST00000283131.4	7684	24	-239	11935	-239	1195	5prime_fragment	FALSE	canonical	3	1216	junction_1	141.109493916449	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGTTTTACAGAAAAACT	143511919	True	NA	NA	False	AAAAAG	-4	NA	143513462	143545551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_143514102_143517354_143517430_143521428_143521596_143524366_143524468_143525450_143525552_143526280_143526461_143527867_143528024_143528582_143528715_143530457_143530527_143534854_143534965_143536451_143536679_143538589_143538712_143538785_143538939_143540362_143540496_143543508_143543658_143543852_143543973_143544736_143544848_143545469
transcript_156688.nic	chr4	+	2700	17	ISM	ENSG00000153147.6	ENST00000283131.4	7684	24	-260	12705	-260	425	5prime_fragment	FALSE	canonical	3	1216	junction_1	137.290963263246	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAACTATGCCGTTGATGC	143513398	False	NA	NA	False	AAGAAA	-2	NA	143513441	143544781	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_143514102_143517354_143517430_143521428_143521596_143524366_143524468_143525450_143525552_143526280_143526461_143527867_143528024_143528582_143528715_143530457_143530527_143534854_143534965_143536451_143536679_143538589_143538712_143538785_143538939_143540362_143540496_143543508_143543658_143543852_143543973_143544736
transcript_156691.nic	chr4	+	2634	16	ISM	ENSG00000153147.6	ENST00000283131.4	7684	24	-240	13515	-240	-385	5prime_fragment	FALSE	canonical	3	1216	junction_1	140.728011900024	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAATTTAGAAATAGGTTT	143513418	False	NA	25	True	AAAACA	-4	NA	143513461	143543971	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_143514102_143517354_143517430_143521428_143521596_143524366_143524468_143525450_143525552_143526280_143526461_143527867_143528024_143528582_143528715_143530457_143530527_143534854_143534965_143536451_143536679_143538589_143538712_143538785_143538939_143540362_143540496_143543508_143543658_143543852
transcript_156697.nic	chr4	+	2306	14	ISM	ENSG00000153147.6	ENST00000283131.4	7684	24	-237	17048	-237	-3918	5prime_fragment	FALSE	canonical	3	1216	junction_1	133.242138438338	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAGTAGAACGTGCTGAG	143511921	True	NA	NA	False	AAGAAA	-1	NA	143513464	143540438	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_143514102_143517354_143517430_143521428_143521596_143524366_143524468_143525450_143525552_143526280_143526461_143527867_143528024_143528582_143528715_143530457_143530527_143534854_143534965_143536451_143536679_143538589_143538712_143538785_143538939_143540362
transcript_1567.known	chr1	+	2747	7	FSM	ENSG00000157870.17	ENST00000419916.8	2747	7	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_5	91.3991551140138	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTGTGCTTTCTTCTTT	2586687	False	NA	19	True	AATAAA	-19	NA	2586776	2591468	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_2586949_2587090_2587296_2587740_2587793_2588389_2588454_2588549_2588626_2588921_2589041_2589409
transcript_156704.nic	chr4	+	684	2	ISM	ENSG00000153147.6	ENST00000283131.4	7684	24	-249	40097	-249	-26967	5prime_fragment	FALSE	canonical	3	1216	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAATCCAAGAACCAGATC	143513409	False	NA	NA	False	NA	NA	NA	143513452	143517389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_143514102_143517354
transcript_156705.known	chr4	+	1989	1	FSM	ENSG00000236296.8	ENST00000510805.1	1989	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAACCTCAGCCTTCATGG	143559134	True	NA	NA	False	AATAAA	-10	NA	143559471	143561460	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_143559500_143561500
transcript_156707.nnic	chr4	-	1217	6	NNC	ENSG00000164162.14	novel	928	6	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	105.323501650866	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTTGAAGCCAATCATT	-145094383	True	NA	-27	True	AATAAA	-27	NA	145098221	144995157	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_144995604_145033041_145033372_145064571_145064693_145081659_145081751_145095984_145096112_145098119
transcript_156710.known	chr4	-	868	5	FSM	ENSG00000164162.14	ENST00000309439.9	868	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_4	79.8040569144201	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTTGAAGCCAATCATT	-145094375	True	NA	-27	True	AATAAA	-27	NA	145098213	144995157	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_144995604_145064571_145064693_145081659_145081751_145095984_145096112_145098130
transcript_156712.known	chr4	-	687	4	FSM	ENSG00000164162.14	ENST00000511466.5	687	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	106.867519231367	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATGTAATAAAGCTCACAT	-145094353	True	NA	-65	True	AATAAA	-31	NA	145098191	144995195	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_144995604_145081659_145081751_145095984_145096112_145098130
transcript_156715.known	chr4	-	7069	21	FSM	ENSG00000164164.17	ENST00000454497.6	7069	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	39.2877525445272	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTGTGATTCTTTGGT	-145179654	False	NA	0	True	ATTAAA	-15	NA	145179680	145133648	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_145138651_145139950_145139992_145141378_145141640_145142195_145142335_145143364_145143446_145143945_145144002_145144310_145144435_145146266_145146430_145150512_145150700_145150801_145150906_145152540_145152636_145155410_145155476_145155568_145155687_145155935_145155997_145159502_145159636_145162639_145162722_145164153_145164227_145165150_145165198_145171669_145171721_145174660_145174745_145179578
transcript_156716.known	chr4	-	7741	21	FSM	ENSG00000164164.17	ENST00000447906.8	7741	21	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_13	25.8365535627336	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTTGTGATTCTTTGG	-145176205	True	NA	-1	True	ATTAAA	-14	NA	145180589	145133649	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_145138651_145139950_145139992_145141378_145141640_145142195_145142335_145143364_145143446_145143945_145144002_145144310_145144435_145146266_145146430_145150512_145150700_145150801_145150906_145152540_145152636_145155410_145155476_145155568_145155687_145155935_145155997_145159502_145159636_145162639_145162722_145164153_145164227_145165150_145165198_145171669_145171721_145174660_145174745_145179814
transcript_156723.known	chr4	+	3887	18	FSM	ENSG00000164163.11	ENST00000296577.9	3887	18	0	0	0	0	multi-exon	FALSE	canonical	3	665	junction_12	63.0622804144654	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTTTTGACAAGGACAAT	145090653	True	NA	NA	False	AATAAA	-20	NA	145098310	145129524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_145098420_145104385_145104516_145105604_145105691_145108014_145108113_145109131_145109250_145110102_145110241_145110374_145110445_145110967_145111065_145112238_145112329_145117292_145117415_145119931_145120154_145121173_145121234_145121332_145121392_145123020_145123132_145123214_145123358_145123477_145123601_145124989_145125102_145127525
transcript_15673.known	chr1	-	543	3	FSM	ENSG00000198715.13	ENST00000497831.1	543	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	7	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATAGCTGCAGTGTGTT	-156287474	False	NA	-7	True	TATAAA	-17	NA	156291550	156290095	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156290361_156290976_156291107_156291402
transcript_156743.nic	chr4	+	1220	11	ISM	ENSG00000164163.11	ENST00000507193.5	2146	19	-71	7551	-48	2607	5prime_fragment	FALSE	canonical	3	691	junction_4	63.7872244262125	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAGAAGAAGTTAAAAAGA	145090582	True	NA	NA	False	TTTAAA	-18	NA	145098239	145120022	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_145098420_145104385_145104516_145105604_145105691_145108014_145108113_145109131_145109250_145110102_145110241_145110374_145110445_145110967_145111065_145112238_145112329_145117292_145117415_145119931
transcript_156744.nic	chr4	+	1276	11	ISM	ENSG00000164163.11	ENST00000507193.5	2146	19	-71	7495	-48	2663	5prime_fragment	FALSE	canonical	3	691	junction_4	63.7872244262125	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGAGAATTTGAGCTAGCA	145090582	True	NA	NA	False	TATAAA	-23	NA	145098239	145120078	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_145098420_145104385_145104516_145105604_145105691_145108014_145108113_145109131_145109250_145110102_145110241_145110374_145110445_145110967_145111065_145112238_145112329_145117292_145117415_145119931
transcript_156748.known	chr4	+	786	8	FSM	ENSG00000164163.11	ENST00000502586.5	786	8	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	237.19035668872	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACGAAATGTTGAAGATCT	145090630	True	NA	NA	False	NA	NA	NA	145098287	145110984	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_145098420_145104388_145104516_145105604_145105691_145108014_145108113_145109131_145109250_145110102_145110241_145110374_145110445_145110967
transcript_156749.nic	chr4	+	1897	7	NIC	ENSG00000170365.10	novel	3293	3	NA	NA	-123	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	28.7368327335417	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACACAC	NA	False	NA	NA	False	TTTAAA	-2	NA	145481574	145558079	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_145481753_145514437_145515014_145539803_145540062_145542581_145542699_145546702_145546925_145553783_145554041_145557790
transcript_156750.nnic	chr4	+	1847	7	NNC	ENSG00000170365.10	novel	3293	3	NA	NA	-81	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	28.7368327335417	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACACAC	NA	False	NA	NA	False	TTTAAA	-2	NA	145481616	145558079	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_+_145481745_145514437_145515014_145539803_145540062_145542581_145542699_145546702_145546925_145553783_145554041_145557790
transcript_156752.known	chr4	+	3002	7	FSM	ENSG00000170365.10	ENST00000302085.9	3002	7	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	18.1628436344337	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCATTTCCTTTATTCA	145481493	True	NA	23	True	AATAAA	-31	NA	145481852	145559176	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_145482039_145514437_145515014_145539803_145540062_145542581_145542699_145546702_145546925_145553783_145554041_145557790
transcript_156757.known	chr4	+	5944	7	FSM	ENSG00000151611.17	ENST00000649156.2	5944	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	9.17272527054467	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGTGGGATCATGTAGT	145619076	True	NA	9	True	GATAAA	-18	NA	145619384	145660033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_145619408_145639074_145639579_145642362_145642486_145645985_145646157_145651061_145651148_145653993_145654144_145655146
transcript_156762.known	chr4	-	4097	15	FSM	ENSG00000151612.18	ENST00000652097.1	4097	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	11.0686632491213	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCATGTTCTGTACCAAAA	-145938282	False	368	NA	False	NA	NA	NA	145938422	145760774	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_145761599_145763089_145763118_145764987_145765166_145765546_145765739_145774505_145774673_145775788_145775961_145779373_145779512_145823421_145823526_145845955_145846014_145849321_145849562_145870244_145870479_145885677_145886159_145892242_145892416_145902165_145903216_145938364
transcript_156765.known	chr4	-	7187	14	FSM	ENSG00000151612.18	ENST00000503462.3	7187	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	10.0047326079318	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATATACTCTAATTAAAAAA	-145938290	False	368	NA	False	NA	NA	NA	145938430	145757664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_145761599_145764987_145765166_145765546_145765739_145774505_145774673_145775788_145775961_145779373_145779512_145823421_145823526_145845955_145846014_145849321_145849562_145870244_145870479_145885677_145886159_145892242_145892416_145902165_145903216_145938364
transcript_156767.known	chr4	-	4094	14	FSM	ENSG00000151612.18	ENST00000656985.1	4094	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	11.3398287454587	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACCAAAAACAGAGAGACAA	-145938282	False	368	NA	False	NA	NA	NA	145938422	145760762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_145761599_145764974_145765166_145765546_145765739_145774505_145774673_145775788_145775961_145779373_145779512_145823421_145823526_145845955_145846014_145849321_145849562_145870244_145870479_145885677_145886159_145892242_145892416_145902165_145903216_145938364
transcript_15677.known	chr1	-	1858	15	FSM	ENSG00000163468.15	ENST00000472765.6	1858	15	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_14	1357.05872859547	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGAGTCTCCCCTTTTCCT	-156283761	True	NA	NA	False	NA	NA	NA	156338257	156309164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156309304_156310557_156310690_156310949_156311196_156312040_156312222_156317165_156317248_156317414_156317548_156318867_156319018_156320838_156321026_156324971_156325090_156333546_156333644_156334712_156334776_156334867_156334919_156335826_156335889_156337676_156337790_156338153
transcript_156775.nic	chr4	-	2846	6	ISM	ENSG00000151612.18	ENST00000652097.1	4097	15	-639	88576	-238	0	5prime_fragment	FALSE	canonical	3	15	junction_5	5.16139516022558	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTCCGAGCTCCTCTTTC	-145938921	False	NA	NA	False	NA	NA	NA	145939061	145849350	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_145849562_145870244_145870479_145885677_145886159_145892242_145892416_145902165_145903216_145938364
transcript_156778.known	chr4	-	4156	15	FSM	ENSG00000151612.18	ENST00000379448.9	4156	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	11.2404154182802	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACCA	-145938290	False	368	NA	False	AAAACA	-15	NA	145938430	145760737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_145761599_145763089_145763123_145764978_145765166_145765546_145765739_145774505_145774673_145775788_145775961_145779373_145779512_145823421_145823526_145845955_145846014_145849321_145849562_145870244_145870479_145885677_145886159_145892242_145892416_145902165_145903216_145938364
transcript_156782.known	chr4	+	454	4	FSM	ENSG00000164167.12	ENST00000649747.1	454	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	698.307636758725	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCACTGACATGTGAGT	146159577	True	NA	-38	True	NA	NA	NA	146175727	146189767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_146175812_146182905_146183016_146187273_146187388_146189621
transcript_156784.known	chr4	+	1352	4	FSM	ENSG00000164167.12	ENST00000502781.5	1352	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	682.830058571596	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCCTTTATTGCATCCTT	146159578	True	NA	14	True	ATTAAA	-15	NA	146175728	146190046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_146176438_146182911_146183016_146187273_146187388_146189621
transcript_156789.known	chr4	+	3970	8	FSM	ENSG00000151617.17	ENST00000651419.1	3970	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	2.64189171555813	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTGTCTCTTCATTTTTA	147481083	True	NA	NA	False	AATAAA	-18	NA	147481096	147544954	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_147481377_147485611_147486102_147519850_147519979_147532505_147532705_147535876_147536030_147539816_147539951_147540376_147540486_147542477
transcript_156792.known	chr4	-	3461	12	FSM	ENSG00000164169.13	ENST00000322396.7	3461	12	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_8	17.1218288974452	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTGCGTGCTCTTTGTA	-147682331	True	NA	NA	False	AATAAA	-25	NA	147684163	147637784	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_147638748_147638959_147639083_147642786_147642941_147653851_147654567_147657791_147657976_147660845_147661039_147668538_147668646_147670640_147670744_147672958_147673127_147673637_147673875_147680322_147680472_147683798
transcript_156799.known	chr4	-	2674	11	FSM	ENSG00000164169.13	ENST00000514886.1	2674	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_10	35.8693462443909	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAGGGTAGCATTAT	-147682293	True	NA	-8	True	AATAAA	-20	NA	147684125	147638384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_147638748_147638959_147639083_147642786_147642941_147653851_147654567_147657791_147657976_147660845_147661039_147668538_147668646_147670640_147670744_147672958_147673127_147673637_147673875_147683798
transcript_156803.nnic	chr4	+	2750	10	NNC	ENSG00000164168.8	novel	4164	10	NA	NA	-48	690	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_7	107.393128041869	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTCTGCAACTTTTTT	NA	False	NA	3	True	AATAAA	-15	NA	147617337	147635218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_+_147618080_147623833_147623965_147624061_147624099_147624803_147625010_147628360_147628436_147629598_147629693_147631392_147631506_147632872_147633003_147633764_147633937_147634168
transcript_156804.known	chr4	+	4164	10	FSM	ENSG00000164168.8	ENST00000296582.8	4164	10	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_7	34.5857317329874	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAAAAGGGTTAGTATCC	147610896	True	NA	NA	False	AGTAAA	-22	NA	147617396	147636721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_147618080_147623833_147623965_147624061_147624099_147624803_147625010_147628360_147628436_147629598_147629693_147631392_147631506_147632902_147633003_147633764_147633937_147634168
transcript_15681.known	chr1	-	1977	14	FSM	ENSG00000163468.15	ENST00000295688.8	1977	14	0	0	0	0	multi-exon	FALSE	canonical	3	3511	junction_10	243.134389507011	1877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTTGTTATGTGTTTTT	-156283796	True	NA	-21	True	ATTAAA	-15	NA	156338292	156308967	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156309304_156310557_156310690_156310949_156311196_156312040_156312222_156317165_156317248_156317414_156317548_156318867_156319018_156320838_156321026_156324971_156325090_156333546_156333644_156334712_156334776_156334867_156334919_156335826_156335889_156338153
transcript_156817.known	chr4	+	3270	23	FSM	ENSG00000071205.12	ENST00000336498.8	3270	23	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_21	9.75145676762755	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTTGTCTGTCCTAAT	147731282	True	NA	7	True	AATAAA	-14	NA	147732087	148072776	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_147732456_147822726_147822823_147822895_147822958_147847150_147847223_147857552_147857655_147864845_147864957_147866711_147866817_147875020_147875151_147879231_147879339_147881837_147881933_147906637_147906720_147909731_147909778_147913073_147913140_147939824_147939900_147946616_147946705_147955315_147955375_147965023_147965130_147966679_147966840_148023262_148023414_148046891_148047052_148063147_148063301_148064415_148064508_148071992
transcript_156819.nic	chr4	+	3300	22	NIC	ENSG00000071205.12	novel	3270	23	NA	NA	-159	0	intron_retention	FALSE	canonical	3	22	junction_20	6.55484449812182	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGATTTGTCTGTCCTAA	147731887	False	NA	6	True	AATAAA	-13	NA	147731903	148072775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_147732456_147822726_147822823_147822895_147822958_147847150_147847223_147857552_147857655_147864845_147864957_147866711_147866817_147875020_147875151_147879231_147879339_147881837_147881933_147906637_147906720_147909731_147909778_147913073_147913140_147939824_147939900_147946616_147946705_147955315_147955375_147965023_147965130_147966679_147966840_148023262_148023414_148046891_148047052_148064415_148064508_148071992
transcript_156824.known	chr4	+	1559	5	FSM	ENSG00000071205.12	ENST00000510379.1	1559	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	7.63216876123687	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCTGTGTGTGTATGGT	147731257	True	NA	NA	False	TTTAAA	-19	NA	147732062	147858488	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_147732456_147822726_147822823_147822895_147822958_147847150_147847223_147857552
transcript_156825.nic	chr4	+	728	4	ISM	ENSG00000071205.12	ENST00000510379.1	1559	5	-104	11265	-104	-11265	5prime_fragment	FALSE	canonical	3	37	junction_3	6.12825877028341	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGTCTAATTTGAATAC	147731944	False	NA	14	True	ATTAAA	-44	NA	147731958	147847223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_147732456_147822726_147822823_147822895_147822958_147847150
transcript_156828.known	chr4	+	1934	13	FSM	ENSG00000071205.12	ENST00000507661.1	1934	13	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_11	6.88547182277455	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGATTTGTCTGTCCTAA	NA	False	NA	6	True	AATAAA	-13	NA	147881866	148072775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_147881933_147906637_147906720_147909731_147909778_147913073_147913140_147939824_147939900_147946616_147946705_147955315_147955375_147965023_147965130_147966679_147966840_148023262_148023414_148046891_148047052_148064415_148064508_148071992
transcript_156835.known	chr4	-	10353	58	FSM	ENSG00000198589.14	ENST00000357115.9	10353	58	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_19	50.8652436058169	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGATTCAGTCCTAGTTT	-151015090	True	NA	-5	True	AATAAA	-32	NA	151015727	150264434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_150265813_150277852_150278005_150282449_150282647_150285932_150286035_150302624_150302793_150310228_150310385_150315560_150315624_150321190_150321369_150325808_150325899_150349991_150350160_150415437_150415591_150435588_150435709_150436723_150436865_150467672_150467786_150471623_150471740_150487731_150487835_150490917_150491036_150588047_150588185_150590712_150590860_150597082_150597116_150599006_150599132_150683550_150683718_150735257_150735367_150761782_150761848_150798080_150798143_150806270_150806405_150808319_150808399_150817123_150817258_150828179_150828622_150831816_150831977_150844099_150844208_150844657_150844780_150848817_150848999_150849421_150849576_150850723_150850903_150851884_150852944_150867670_150867864_150868181_150868306_150870524_150870607_150871344_150871454_150872662_150872756_150893051_150893150_150896393_150896457_150897738_150897819_150900048_150900218_150905837_150905991_150906296_150906406_150908333_150908468_150908659_150908858_150914194_150914342_150915607_150915728_150916400_150916528_150916616_150916739_150921197_150921294_150928515_150928617_150928833_150929066_151014426_151014862_151015472
transcript_156839.known	chr4	-	2140	2	FSM	ENSG00000198589.14	ENST00000514435.1	2140	2	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACTTACTTTTGAAGAAT	-151009336	True	NA	NA	False	AAAAAG	-4	NA	151015284	151012804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_151014862_151015201
transcript_156840.known	chr4	+	2543	1	FSM	ENSG00000181541.6	ENST00000317605.6	2543	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTGTTTGTGGATTGTT	NA	False	NA	NA	False	AATAAA	-21	NA	150582150	150584693	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_150582200_150584700
transcript_156842.known	chr4	-	5207	20	FSM	ENSG00000109686.19	ENST00000604030.7	5207	20	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_9	26.9275214741792	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCTCATACTAGACTGA	-151319677	True	NA	-2	True	AATAAA	-22	NA	151325605	151120280	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_151122208_151127617_151127716_151128169_151128357_151132330_151132384_151133033_151133237_151135073_151135133_151137731_151137863_151139774_151139848_151143909_151144051_151147921_151148187_151149499_151149562_151159239_151159353_151165588_151165697_151174669_151175675_151176533_151176688_151176816_151176956_151179354_151179398_151187422_151187464_151226046_151226087_151325240
transcript_156847.known	chr4	+	674	6	FSM	ENSG00000145425.10	ENST00000507327.5	674	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7631.28370328348	4149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGTGAAGGCAGTAGTT	151081792	True	NA	NA	False	NA	NA	NA	151099668	151104490	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_151099713_151100484_151100589_151100974_151101163_151102870_151103080_151104176_151104287_151104471
transcript_156850.nic	chr4	+	903	5	ISM	ENSG00000145425.10	ENST00000274065.9	869	6	-253	404	-249	0	5prime_fragment	FALSE	canonical	3	18483	junction_2	899.00027808672	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTCTTCGTTAGAAAAGTA	NA	False	NA	NA	False	NA	NA	NA	151099374	151104238	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_151099715_151100484_151100589_151100974_151101163_151102870_151103080_151104176
transcript_156855.known	chr4	+	576	4	FSM	ENSG00000145425.10	ENST00000509736.5	576	4	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	9067.32913021004	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGCTTCTGAACATTC	151081747	True	NA	13	True	AATAAA	-16	NA	151099623	151104637	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_151099715_151102870_151103080_151104176_151104287_151104471
transcript_156857.known	chr4	+	985	6	FSM	ENSG00000145425.10	ENST00000514682.5	985	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	7629.28904682474	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGCTTCTGAACATTC	151081752	True	NA	13	True	AATAAA	-16	NA	151099628	151104637	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_151099837_151100484_151100589_151100974_151101163_151102870_151103080_151104176_151104287_151104471
transcript_156864.known	chr4	+	11517	14	FSM	ENSG00000164142.16	ENST00000435205.6	11517	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	8.60370086875719	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTAATTCATTTATTC	151404443	True	NA	40	True	ATTAAA	-17	NA	151409175	151670503	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_151409466_151454700_151454809_151482523_151482649_151566137_151566365_151577449_151578077_151586640_151586800_151588839_151588927_151629701_151629870_151638676_151638757_151646557_151646749_151649458_151650593_151656231_151656411_151656759_151656899_151662500
transcript_156868.nic	chr4	+	4553	13	NIC	ENSG00000164142.16	novel	11517	14	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	10.4837837741067	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGAAGCCATTTCATAG	151404407	True	NA	9	True	TATAAA	-15	NA	151409139	151663628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_151409466_151454700_151454809_151566137_151566365_151577449_151578077_151586640_151586800_151588839_151588927_151629701_151629870_151638676_151638757_151646557_151646749_151649458_151650593_151656231_151656411_151656759_151656899_151662500
transcript_156873.nnic	chr4	+	4439	12	NIC	ENSG00000164142.16	novel	11517	14	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	10.9302824474103	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGAAGCCATTTCATAG	151404413	True	NA	9	True	TATAAA	-15	NA	151409145	151663628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_151409466_151566137_151566365_151577449_151578077_151586640_151586800_151588839_151588927_151629701_151629870_151638676_151638757_151646557_151646749_151649458_151650593_151656231_151656411_151656759_151656899_151662500
transcript_156878.known	chr4	-	2369	13	FSM	ENSG00000059691.12	ENST00000263985.11	2369	13	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_5	17.4872969768216	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTTTTCCAATAAATTTA	-151759133	True	NA	NA	False	AATAAA	-14	NA	151761007	151670503	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_151671303_151672761_151672897_151679812_151679892_151688629_151688764_151701328_151701519_151703850_151703896_151705184_151705270_151707987_151708102_151716008_151716132_151716875_151717075_151719424_151719539_151758771_151758923_151760806
transcript_156889.known	chr4	-	1519	8	FSM	ENSG00000059691.12	ENST00000512306.5	1519	8	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_3	18.1737644500449	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGATAATTGAAACTTTTA	-151759111	True	NA	NA	False	AATAAA	-21	NA	151760985	151703341	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_151703896_151705184_151705270_151707987_151708102_151716008_151716132_151716875_151717075_151719424_151719539_151758771_151758923_151760806
transcript_156890.known	chr4	-	605	3	FSM	ENSG00000059691.12	ENST00000508611.1	605	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	91	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTGTGTTTTACTGCC	-151759116	True	NA	NA	False	ATTAAA	-24	NA	151760990	151721945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_151722216_151758771_151758923_151760806
transcript_156893.known	chr4	-	5639	14	FSM	ENSG00000109670.16	ENST00000281708.10	5639	14	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_11	21.5708547616438	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCTAAATATATTTAGTAT	-152534766	True	NA	NA	False	AATAAA	-17	NA	152536092	152320543	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_152323150_152324183_152324395_152326005_152326232_152328207_152328390_152329671_152329786_152330731_152330869_152332595_152332720_152337801_152337937_152346929_152347072_152350041_152350125_152411302_152411873_152412479_152412530_152534940_152535034_152535126
transcript_156898.nnic	chr4	-	3311	13	NNC	ENSG00000109670.16	novel	5653	12	NA	NA	-12	0	intron_retention	FALSE	non_canonical	0	0	junction_12	23.8810710722018	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAGAAAAGA	-152534778	True	NA	-94	True	NA	NA	NA	152536104	152322818	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_152323150_152324183_152324395_152326005_152326232_152328207_152328390_152329671_152329786_152330731_152330869_152332595_152332720_152337801_152337937_152346929_152347072_152350041_152350125_152411302_152411873_152534940_152535261_152535368
transcript_1569.known	chr1	+	2689	7	FSM	ENSG00000157870.17	ENST00000378427.6	2689	7	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_5	83.7365246207147	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCACTTTTTGTGCTTTCT	2586708	False	NA	14	True	AATAAA	-14	NA	2586797	2591463	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_2586949_2587090_2587296_2587740_2587793_2588389_2588454_2588549_2588626_2588953_2589041_2589409
transcript_15690.known	chr1	-	1815	12	FSM	ENSG00000163468.15	ENST00000368259.6	1815	12	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_10	1100.75232725187	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGTTGTTATGTGTTTT	-156283749	True	NA	-22	True	ATTAAA	-14	NA	156338245	156308968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156309304_156310557_156310690_156310949_156311196_156312040_156312222_156317165_156317248_156317414_156317548_156318867_156319018_156320838_156321026_156324971_156325090_156333546_156333644_156335826_156335889_156338153
transcript_156900.known	chr4	-	2261	11	FSM	ENSG00000109670.16	ENST00000603841.1	2261	11	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_7	9.20271699010678	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAGAAAAGA	NA	False	NA	-94	True	NA	NA	NA	152411878	152322818	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_152323150_152324183_152324395_152326005_152326232_152328207_152328390_152329671_152329786_152330731_152330869_152332595_152332720_152337801_152337937_152346929_152347072_152350041_152350125_152411302
transcript_156901.known	chr4	+	3000	1	FSM	ENSG00000268471.6	ENST00000604157.1	3000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGGTATATATGAGTCCCA	152535883	True	NA	38	True	AATAAA	-39	NA	152536263	152539263	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_152536300_152539300
transcript_156902.known	chr4	-	10534	7	FSM	ENSG00000170006.12	ENST00000304385.8	10534	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	1.34370962471642	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGAGCTTCTCTTCTTT	-152679888	True	NA	NA	False	ATTAAA	-28	NA	152679997	152618627	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_152628562_152640927_152640986_152643087_152643174_152644414_152644443_152652537_152652577_152652666_152652928_152679869
transcript_156906.known	chr4	-	2438	2	FSM	ENSG00000169989.3	ENST00000304337.3	2438	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTGGTTTAATTGCAAAA	-152779711	True	NA	NA	False	CATAAA	-18	NA	152779730	152769353	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_152771543_152779481
transcript_156911.known	chr4	+	3424	9	FSM	ENSG00000164144.16	ENST00000451320.6	3424	9	0	0	0	0	multi-exon	TRUE	canonical	3	115	junction_1	77.3336925279014	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTCTGAAGTTGGATATT	152779926	False	NA	NA	False	AATAAA	-21	NA	152779936	152912357	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_152780092_152829624_152829727_152863605_152863715_152870752_152870849_152872451_152872565_152880962_152881185_152882722_152882881_152888132_152888308_152910063
transcript_156912.known	chr4	+	3542	9	FSM	ENSG00000164144.16	ENST00000353617.7	3542	9	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_3	62.1726426975724	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTCTGAAGTTGGATATT	152773944	True	NA	NA	False	AATAAA	-21	NA	152779953	152912357	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_152780227_152829624_152829727_152863605_152863715_152870752_152870849_152872451_152872565_152880962_152881185_152882722_152882881_152888132_152888308_152910063
transcript_156917.known	chr4	+	1601	8	FSM	ENSG00000164144.16	ENST00000405727.6	1601	8	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	80.1623352953243	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAAGAAACTATTT	152773961	True	NA	NA	False	ATTAAA	-30	NA	152779970	152910664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_152780092_152829624_152829727_152863605_152863715_152872451_152872565_152880962_152881185_152882722_152882881_152888132_152888308_152910063
transcript_156918.nic	chr4	+	1179	8	ISM	ENSG00000164144.16	ENST00000353617.7	3542	9	12	24107	-5	7077	5prime_fragment	FALSE	canonical	3	176	junction_3	60.2884224171691	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGATAAAATGCGCAATGA	152773956	True	NA	NA	False	NA	NA	NA	152779965	152888250	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_152780227_152829624_152829727_152863605_152863715_152870752_152870849_152872451_152872565_152880962_152881185_152882722_152882881_152888132
transcript_15692.nic	chr1	-	729	7	ISM	ENSG00000163468.15	ENST00000295688.8	1977	14	-13	11872	0	0	5prime_fragment	FALSE	canonical	3	3511	junction_3	256.871401029127	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAACTTTCAAAGTGTAT	-156283809	True	NA	5	True	CATAAA	-22	NA	156338305	156320839	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_156321026_156324971_156325090_156333546_156333644_156334712_156334776_156334867_156334919_156335826_156335889_156338153
transcript_156920.known	chr4	+	1302	8	FSM	ENSG00000164144.16	ENST00000356064.3	1302	8	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_3	61.5901529367764	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGCGTTGTTATATTTCTA	152773975	True	NA	NA	False	AATAAA	-7	NA	152779984	152910244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_152780227_152829624_152829727_152863605_152863715_152872451_152872565_152880962_152881185_152882722_152882881_152888132_152888308_152910063
transcript_156930.known	chr4	-	1048	2	FSM	ENSG00000287642.2	ENST00000685840.1	1344	2	120	176	116	0	multi-exon	FALSE	canonical	1	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGACATGTATCCTTGG	-152936652	True	NA	2	True	AATAAA	-16	NA	152936761	152934515	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_152935451_152936648
transcript_156934.known	chr4	+	6827	13	FSM	ENSG00000109654.16	ENST00000674786.1	6827	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	53.1874959198327	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTGCAGAGTGAAT	153202129	True	NA	2	True	AATAAA	-9	NA	153204462	153339311	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_153204561_153270337_153270520_153275892_153276131_153281464_153281566_153292981_153293134_153294304_153294486_153295312_153296037_153315484_153315589_153315831_153316000_153322647_153322817_153324077_153324149_153328529_153328671_153334813
transcript_156938.known	chr4	+	6752	12	FSM	ENSG00000109654.16	ENST00000675293.1	6752	12	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	30.9320770144805	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCAGAGTGAATATTTAT	153202109	True	NA	8	True	AATAAA	-15	NA	153204442	153339317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_153204561_153270337_153270520_153275892_153276131_153292981_153293134_153294304_153294486_153295312_153296037_153315484_153315589_153315831_153316000_153322647_153322817_153324077_153324149_153328529_153328671_153334813
transcript_15694.known	chr1	-	1063	6	FSM	ENSG00000163468.15	ENST00000368256.3	1063	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	1551.47782452731	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATAAAGGACACTTTTTT	-156283815	True	NA	NA	False	AATATA	-2	NA	156338311	156332652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156333285_156333546_156333644_156334712_156334776_156334867_156334919_156335826_156335889_156338153
transcript_156940.known	chr4	+	6692	12	FSM	ENSG00000109654.16	ENST00000675780.1	6692	12	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_5	41.2539003916073	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTGCAGAGTGAAT	153202109	True	NA	2	True	AATAAA	-9	NA	153204442	153339311	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_153204561_153270334_153270520_153275892_153276131_153292981_153293134_153294304_153294429_153295312_153296037_153315484_153315589_153315831_153316000_153322647_153322817_153324077_153324149_153328529_153328671_153334813
transcript_156941.known	chr4	+	6755	12	FSM	ENSG00000109654.16	ENST00000338700.10	6755	12	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	22.5681703744364	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCAGAGTGAATATTTAT	153202109	True	NA	8	True	AATAAA	-15	NA	153204442	153339317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_153204561_153270334_153270520_153275892_153276131_153292981_153293134_153294304_153294486_153295312_153296037_153315484_153315589_153315831_153316000_153322647_153322817_153324077_153324149_153328529_153328671_153334813
transcript_156944.known	chr4	+	6699	12	FSM	ENSG00000109654.16	ENST00000676029.1	6699	12	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	40.52017148928	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTGCAGAGTGAAT	153202109	True	NA	2	True	AATAAA	-9	NA	153204442	153339311	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_153204561_153270334_153270520_153275942_153276131_153292981_153293134_153294304_153294486_153295312_153296037_153315484_153315589_153315831_153316000_153322647_153322817_153324077_153324149_153328529_153328671_153334813
transcript_156945.known	chr4	+	7269	13	FSM	ENSG00000109654.16	ENST00000675835.1	7269	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	49.7942990935933	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCAGAGTGAATATTTAT	153202112	True	NA	8	True	AATAAA	-15	NA	153204445	153339317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_153204561_153222242_153222760_153270334_153270520_153275892_153276131_153292981_153293134_153294304_153294486_153295312_153296037_153315484_153315589_153315831_153316000_153322647_153322817_153324077_153324149_153328529_153328671_153334813
transcript_156948.known	chr4	+	6871	12	FSM	ENSG00000109654.16	ENST00000675977.1	6871	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	34.7244168268805	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTGCAGAGTGAAT	153256493	True	NA	2	True	AATAAA	-9	NA	153257367	153339311	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_153257608_153270334_153270520_153275892_153276131_153292981_153293134_153294304_153294486_153295312_153296037_153315484_153315589_153315831_153316000_153322647_153322817_153324077_153324149_153328529_153328671_153334813
transcript_15695.known	chr1	+	595	4	FSM	ENSG00000163467.12	ENST00000368254.6	595	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	3.68178700572909	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTATTGTGTTGTTTTCCTC	156338232	True	NA	NA	False	AGTAAA	-17	NA	156338525	156346995	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156338606_156339633_156339792_156344579_156344709_156346767
transcript_156951.known	chr4	+	6544	11	FSM	ENSG00000109654.16	ENST00000675710.1	6544	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	39.7820311195897	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTGCAGAGTGAAT	153202129	True	NA	2	True	AATAAA	-9	NA	153204462	153339311	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_153204561_153275892_153276131_153292981_153293134_153294304_153294486_153295312_153296037_153315484_153315589_153315831_153316000_153322647_153322817_153324077_153324149_153328529_153328671_153334813
transcript_156953.known	chr4	+	6412	10	FSM	ENSG00000109654.16	ENST00000675492.1	6412	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	49.4750217562133	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTGCAGAGTGAAT	153202110	True	NA	2	True	AATAAA	-9	NA	153204443	153339311	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_153204561_153270337_153270520_153275892_153276131_153295312_153296037_153315484_153315589_153315831_153316000_153322647_153322817_153324077_153324149_153328529_153328671_153334813
transcript_156954.known	chr4	+	6413	10	FSM	ENSG00000109654.16	ENST00000675425.1	6413	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	44.5240952937664	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTGCAGAGTGAAT	153202112	True	NA	2	True	AATAAA	-9	NA	153204445	153339311	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_153204561_153270334_153270520_153275892_153276131_153295312_153296037_153315484_153315589_153315831_153316000_153322647_153322817_153324077_153324149_153328529_153328671_153334813
transcript_156957.known	chr4	+	676	3	FSM	ENSG00000109654.16	ENST00000441616.6	676	3	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_1	48.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGACTACCTGCTCACT	153202109	True	NA	4	True	ATTAAA	-17	NA	153204442	153276268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_153204561_153270337_153270520_153275892
transcript_156958.known	chr4	+	679	3	FSM	ENSG00000109654.16	ENST00000632856.2	679	3	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	32.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGACTACCTGCTCACT	153202109	True	NA	4	True	ATTAAA	-17	NA	153204442	153276268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_153204561_153270334_153270520_153275892
transcript_15696.known	chr1	+	512	4	FSM	ENSG00000163467.12	ENST00000368253.6	512	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	3.85861230093008	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGTTATTGTGTTGTTT	156338209	True	NA	NA	False	AGTAAA	-12	NA	156338502	156346990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156338606_156339734_156339792_156344579_156344709_156346767
transcript_156960.known	chr4	+	766	3	FSM	ENSG00000109654.16	ENST00000482578.3	766	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	55.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGACTACCTGCTCACT	153256528	False	NA	4	True	ATTAAA	-17	NA	153257402	153276268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_153257608_153270334_153270520_153275892
transcript_156963.known	chr4	+	3962	18	FSM	ENSG00000288637.1	ENST00000675079.1	3962	18	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	160.534940520834	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCATCTCAGTCCAGGCA	NA	False	NA	-6	True	AATAAA	-5	NA	153222058	153415081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_153223040_153270337_153270520_153275892_153276131_153292981_153293134_153294304_153294486_153295312_153296037_153315484_153315589_153315831_153316000_153322647_153322829_153324077_153324149_153328529_153328671_153350063_153350130_153355653_153355712_153358473_153358623_153394261_153394337_153397218_153397334_153408970_153409016_153414750
transcript_156964.known	chr4	+	929	8	FSM	ENSG00000121211.8	ENST00000240488.8	929	8	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_1	21.6578213237111	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAGATCAAAACCAT	153337142	True	NA	31	True	AATAAA	-42	NA	153344687	153415118	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_153344741_153350063_153350130_153355653_153355712_153358473_153358623_153394261_153394337_153397218_153397334_153408970_153409016_153414750
transcript_156967.known	chr4	+	830	7	FSM	ENSG00000121211.8	ENST00000622785.4	830	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	147.197901555091	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGCAGATTTACAAATGAT	153337103	True	NA	8	True	AATAAA	-19	NA	153344648	153415095	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_153344741_153350063_153350130_153355653_153355712_153358473_153358623_153394261_153394337_153408970_153409016_153414750
transcript_156973.known	chr4	+	5006	35	FSM	ENSG00000121210.16	ENST00000409959.8	5006	35	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_17	22.2620637176534	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGTGCTCTGTTTTTTT	153461286	True	NA	110	True	AATAAA	-14	NA	153466359	153636711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_153466522_153467210_153467282_153473844_153473889_153550072_153550142_153555786_153555911_153556965_153557083_153558257_153558369_153580825_153580904_153581406_153581561_153583189_153583249_153583563_153583673_153584834_153584932_153585457_153585612_153586208_153586380_153587741_153587812_153588889_153589008_153591052_153591195_153592474_153592585_153593798_153593872_153596257_153596386_153598589_153598733_153602151_153602339_153602541_153602728_153603302_153603453_153603801_153604431_153612251_153612401_153620755_153620881_153621682_153621850_153622897_153623084_153626146_153626226_153627604_153627688_153632717_153632839_153634191_153634281_153635431_153635572_153636300
transcript_156977.known	chr4	+	5017	35	FSM	ENSG00000121210.16	ENST00000409663.7	5017	35	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_11	28.8901990061667	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGTGCTCTGTTTTTTT	153461272	True	NA	110	True	AATAAA	-14	NA	153466345	153636711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_153466522_153467210_153467282_153473844_153473889_153550072_153550142_153555786_153555911_153556965_153557083_153558257_153558369_153580825_153580904_153581406_153581561_153583189_153583249_153583563_153583673_153584837_153584932_153585457_153585612_153586208_153586380_153587741_153587812_153588889_153589008_153591052_153591195_153592474_153592585_153593798_153593872_153596257_153596386_153598589_153598733_153602151_153602339_153602541_153602728_153603302_153603453_153603801_153604431_153612251_153612401_153620755_153620881_153621682_153621850_153622897_153623084_153626146_153626226_153627604_153627688_153632717_153632839_153634191_153634281_153635431_153635572_153636300
transcript_15698.known	chr1	-	748	8	FSM	ENSG00000163468.15	ENST00000496684.6	748	8	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_3	1314.82207999441	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGCATTGTGCTGCTGGAT	-156283733	True	NA	NA	False	NA	NA	NA	156338229	156318920	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156319018_156320838_156321026_156324971_156325087_156333546_156333644_156334712_156334776_156334867_156334919_156335826_156335889_156338153
transcript_156992.nic	chr4	+	3251	25	ISM	ENSG00000121210.16	ENST00000409959.8	5006	35	-58	32544	-44	553	5prime_fragment	FALSE	canonical	3	108	junction_17	19.9805460941943	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTACTGAATAAAGAAGAAA	153461228	True	NA	8	True	CATAAA	-37	NA	153466301	153604167	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_153466522_153467210_153467282_153473844_153473889_153550072_153550142_153555786_153555911_153556965_153557083_153558257_153558369_153580825_153580904_153581406_153581561_153583189_153583249_153583563_153583673_153584834_153584932_153585457_153585612_153586208_153586380_153587741_153587812_153588889_153589008_153591052_153591195_153592474_153592585_153593798_153593872_153596257_153596386_153598589_153598733_153602151_153602339_153602541_153602728_153603302_153603453_153603801
transcript_156993.nic	chr4	+	3190	25	ISM	ENSG00000121210.16	ENST00000409663.7	5017	35	14	32544	0	553	5prime_fragment	FALSE	canonical	3	49	junction_11	29.0236673059917	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTACTGAATAAAGAAGAAA	153461286	True	NA	8	True	CATAAA	-37	NA	153466359	153604167	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_153466522_153467210_153467282_153473844_153473889_153550072_153550142_153555786_153555911_153556965_153557083_153558257_153558369_153580825_153580904_153581406_153581561_153583189_153583249_153583563_153583673_153584837_153584932_153585457_153585612_153586208_153586380_153587741_153587812_153588889_153589008_153591052_153591195_153592474_153592585_153593798_153593872_153596257_153596386_153598589_153598733_153602151_153602339_153602541_153602728_153603302_153603453_153603801
transcript_157010.nnic	chr4	-	1223	7	NIC	ENSG00000145428.15	novel	1358	9	NA	NA	-162	0	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	14.3459247020035	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGTTTCTTAACTCATG	-153759970	True	NA	NA	False	AATAAA	-34	NA	153760186	153710159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_153710490_153712474_153712577_153715528_153715663_153720183_153720305_153723350_153723459_153751437_153751476_153759796
transcript_157011.known	chr4	-	585	3	FSM	ENSG00000145428.15	ENST00000509321.5	585	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	17	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATAGAGGCCAGGGATGCT	-153759939	False	NA	NA	False	NA	NA	NA	153759961	153748404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_153748787_153751437_153751476_153759796
transcript_157012.known	chr4	-	1996	3	FSM	ENSG00000145423.5	ENST00000274063.5	1996	3	0	0	0	0	multi-exon	FALSE	canonical	3	2799	junction_2	37	1333	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGTCTTCTGTCTTGT	-153736731	True	NA	-3	True	TATAAA	-22	NA	153789083	153780590	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_153781756_153785863_153785945_153788333
transcript_157017.known	chr4	-	3317	15	FSM	ENSG00000171566.12	ENST00000499023.7	3317	15	0	0	0	0	multi-exon	TRUE	canonical	3	403	junction_9	45.6949177721558	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTGCATTCCTGAGAGAT	-154541355	True	NA	-7	True	AATAAA	-16	NA	154550400	154535004	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_154536745_154537285_154537480_154537968_154538109_154539104_154539214_154539950_154540054_154540593_154540696_154540784_154540935_154542186_154542280_154544444_154544547_154545835_154545924_154546122_154546214_154547010_154547065_154547710_154547854_154548828_154548936_154550299
transcript_157019.known	chr4	-	1673	15	FSM	ENSG00000171566.12	ENST00000302078.9	1673	15	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_11	124.890584766288	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGGATATCCAGTCATTT	-154541352	True	NA	37	True	ATTAAA	-21	NA	154550397	154536618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_154536745_154537285_154537480_154537968_154538109_154539104_154539214_154539950_154540054_154540593_154540696_154540784_154540935_154542186_154542280_154544444_154544547_154545835_154545924_154546122_154546214_154547037_154547065_154547710_154547854_154548828_154548936_154550299
transcript_157029.known	chr4	+	4901	3	FSM	ENSG00000121207.12	ENST00000336356.4	4901	3	0	0	0	0	multi-exon	TRUE	canonical	3	81	junction_1	209	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCTCTTTAAATTTTAAA	154740435	True	NA	11	True	AATAAA	-18	NA	154743999	154753120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_154744223_154744325_154744867_154748983
transcript_15703.known	chr1	-	543	2	FSM	ENSG00000125462.19	ENST00000465270.5	543	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAATAGTGGTAGTGGATA	-156421498	True	NA	-3	True	AATAAA	-22	NA	156421752	156404256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156404602_156421554
transcript_157035.known	chr4	+	5002	2	FSM	ENSG00000121207.12	ENST00000510733.1	5002	2	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTCTCTTTAAATTTTA	154740435	True	NA	9	True	AATAAA	-16	NA	154743999	154753118	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_154744867_154748983
transcript_15704.known	chr1	-	473	3	FSM	ENSG00000125462.19	ENST00000400991.6	473	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	6	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGGTAGTGGATATACCT	-156429301	True	NA	2	True	AATAAA	-27	NA	156429423	156404251	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156404602_156426797_156426873_156429375
transcript_157041.known	chr4	+	2315	6	FSM	ENSG00000151962.8	ENST00000514866.5	2315	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	5.84465567848098	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCAGCTAGTTTATACCA	154780966	True	NA	NA	False	AATGAA	-5	NA	154781212	154827385	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_154781437_154796741_154796904_154797810_154798279_154798781_154799565_154820362_154820423_154826767
transcript_157042.known	chr4	+	3619	2	FSM	ENSG00000185149.6	ENST00000329476.4	3619	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAATTGTGTGGAATTTT	155208592	True	NA	NA	False	ATTAAA	-16	NA	155208635	155217076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_155209070_155213891
transcript_157043.known	chr4	-	7328	14	FSM	ENSG00000164114.19	ENST00000311277.9	7328	14	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_10	12.7692307692308	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGATGCCTTTTTATGTTT	-155376938	True	NA	-24	True	AATAAA	-20	NA	155376965	155342657	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_155347906_155352595_155352729_155352911_155353058_155353178_155353341_155355070_155355161_155355715_155355885_155357448_155357520_155360167_155360416_155362047_155362142_155368585_155368813_155373135_155373457_155374936_155375022_155375775_155375915_155376770
transcript_157046.nic	chr4	-	1962	11	NIC	ENSG00000164114.19	novel	1644	11	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_10	15.2541797550704	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAGGCTTGAAGAAAAA	-155375947	True	NA	NA	False	AAGAAA	-25	NA	155376808	155353252	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_155353341_155355070_155355161_155355715_155355885_155357448_155357520_155360167_155360416_155362047_155362142_155368585_155368810_155373135_155373457_155374936_155375022_155375775_155375915_155376375
transcript_157047.known	chr4	-	1644	11	FSM	ENSG00000164114.19	ENST00000433024.5	1644	11	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_10	10.4216121593542	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAGGCTTGAAGAAAAA	-155376858	False	NA	NA	False	AAGAAA	-25	NA	155376885	155353252	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_155353341_155355070_155355161_155355715_155355885_155357448_155357520_155360167_155360416_155362047_155362142_155368585_155368810_155373135_155373457_155374936_155375022_155375775_155375915_155376770
transcript_15705.known	chr1	-	6013	38	FSM	ENSG00000183856.11	ENST00000361170.7	6013	38	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_11	5.72615900976503	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTTGTTAACCCTTAT	-156568374	True	NA	-18	True	AATAAA	-18	NA	156572565	156525404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156526600_156527951_156528061_156528508_156528611_156528915_156529083_156530104_156530318_156531159_156531248_156532979_156533107_156533772_156533876_156534008_156534142_156534500_156534734_156535162_156535248_156537180_156537322_156538808_156539034_156539373_156539538_156539837_156539991_156540707_156540917_156543980_156544051_156544151_156544224_156544388_156544473_156548072_156548244_156548347_156548488_156548580_156548749_156550260_156550352_156551704_156551869_156551973_156552096_156554234_156554393_156556532_156556694_156560933_156561022_156561837_156562002_156562586_156562666_156563133_156563313_156563552_156563667_156563756_156563825_156564614_156564692_156566026_156566105_156566389_156566547_156569375_156569464_156572492
transcript_157055.known	chr4	-	728	4	FSM	ENSG00000164114.19	ENST00000481250.1	728	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	11.6141675934562	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCTAACTTCAATTTTAC	-155375952	True	NA	NA	False	AAAAAG	-37	NA	155376813	155372995	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_155373457_155374936_155375022_155375775_155375915_155376770
transcript_157059.known	chr4	+	3382	14	FSM	ENSG00000061918.14	ENST00000264424.13	3382	14	0	0	0	0	multi-exon	FALSE	canonical	2	51	junction_10	13.6581250066847	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGAATGTCATCAGCTTA	155758019	True	NA	NA	False	AATAAA	-31	NA	155759020	155807811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_155759144_155759786_155759861_155774967_155775069_155777523_155777643_155789713_155789912_155793855_155794087_155795340_155795458_155796376_155796511_155799876_155800075_155802341_155802580_155803623_155803765_155804592_155804748_155805102_155805230_155806385
transcript_157060.known	chr4	+	1951	14	FSM	ENSG00000061918.14	ENST00000503520.5	1951	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	25.0029584048385	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATCTCTCACTATCCGTT	155758088	True	NA	NA	False	NA	NA	NA	155759089	155806548	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_155759144_155759786_155759861_155774967_155775069_155777523_155777643_155789713_155789912_155793855_155794087_155795340_155795458_155796376_155796511_155799876_155800075_155802440_155802580_155803623_155803765_155804592_155804748_155805102_155805230_155806385
transcript_157061.known	chr4	+	1700	12	FSM	ENSG00000151790.9	ENST00000536354.3	1700	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.55345522642137	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTTTGAAATATTGATT	NA	False	NA	NA	False	AATAAA	-22	NA	155903695	155920406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_155903794_155904017_155904124_155905066_155905158_155907721_155907793_155908886_155909015_155910024_155910212_155911496_155911605_155914322_155914435_155915854_155915913_155917394_155917475_155918148_155918240_155919836
transcript_157062.known	chr4	-	2903	8	FSM	ENSG00000256043.5	ENST00000433477.4	2903	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	4.92391083988974	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTCTTAAGTGTATGGC	NA	False	NA	2	True	AATAAA	-33	NA	155953866	155924117	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_155926071_155928335_155928429_155929541_155929706_155937361_155937484_155939370_155939539_155942316_155942457_155943155_155943265_155953712
transcript_157063.known	chr4	-	2505	8	FSM	ENSG00000256043.5	ENST00000678374.1	2505	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	6	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGCAGTAGCAACCACTAA	NA	False	NA	NA	False	AATGAA	-7	NA	155953910	155924554	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_155926071_155928335_155928429_155929541_155929706_155937361_155937484_155939370_155939539_155942316_155942457_155943155_155943260_155953712
transcript_157064.known	chr4	-	4570	6	FSM	ENSG00000145431.11	ENST00000502773.6	4570	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	3.38230690505755	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCAGGTGTTCATGTCT	-156971668	True	NA	NA	False	AATAAA	-19	NA	156971799	156760453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_156763207_156767772_156767991_156772685_156772894_156810836_156811018_156850220_156850417_156970785
transcript_157065.known	chr4	+	3033	10	FSM	ENSG00000109738.11	ENST00000264428.9	3033	10	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_8	3.17785547690558	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGTAATTCAGTGCTAT	157076061	True	NA	NA	False	AATAAA	-21	NA	157076149	157172090	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_157076298_157077995_157078147_157120555_157120663_157122329_157122398_157136468_157136699_157136803_157136887_157138808_157138950_157143806_157143960_157152717_157153011_157170431
transcript_157069.known	chr4	+	3210	13	FSM	ENSG00000164124.11	ENST00000296529.11	3210	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	4.62481230850387	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTCTTATTACCTCTATA	158210356	False	NA	NA	False	AGTAAA	-26	NA	158210485	158255416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_158210587_158211452_158211575_158212607_158212777_158215190_158215314_158217320_158217421_158219309_158219391_158232900_158232983_158235437_158235506_158237524_158237644_158240298_158240419_158241508_158241607_158244295_158244350_158253443
transcript_157072.known	chr4	+	3111	13	FSM	ENSG00000171503.13	ENST00000511912.6	3111	13	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_5	11.6726175299288	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACTAAGGTGTCAAAAGAA	158671917	True	NA	NA	False	NA	NA	NA	158672295	158709623	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_158672491_158680466_158680608_158682194_158682425_158684591_158684674_158685100_158685220_158690347_158690426_158695496_158695644_158697558_158697700_158698986_158699131_158703422_158703592_158706188_158706372_158706628_158706851_158708363
transcript_157075.known	chr4	-	1830	10	FSM	ENSG00000171497.5	ENST00000307720.4	1830	10	0	0	0	0	multi-exon	FALSE	canonical	3	497	junction_6	35.0428309358705	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTTCCTTCGATTCTT	-158714399	True	NA	-5	True	AATAAA	-23	NA	158723396	158709126	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_158709825_158710627_158710671_158710761_158710849_158713118_158713261_158715296_158715404_158715561_158715685_158717011_158717201_158719179_158719287_158721342_158721484_158723203
transcript_157083.known	chr4	+	987	2	FSM	ENSG00000171503.13	ENST00000510353.5	987	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAAAAGAAGAAGA	158672287	False	NA	31	True	NA	NA	NA	158672315	158680101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_158672491_158679289
transcript_157085.known	chr4	-	3366	2	FSM	ENSG00000205208.5	ENST00000379205.5	3366	2	0	0	0	0	multi-exon	FALSE	canonical	3	455	junction_1	0	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCTTTTGTTATAGGGA	-158668401	True	NA	0	True	AATAAA	-24	NA	158671887	158666674	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_158669769_158671615
transcript_157086.known	chr4	-	1103	2	FSM	ENSG00000205208.5	ENST00000508836.1	1103	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATATTTTTTGTACTTG	-158672148	True	NA	NA	False	AATATA	-3	NA	158672255	158668924	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_158669769_158671996
transcript_157087.known	chr4	-	3358	2	FSM	ENSG00000205208.5	ENST00000508457.1	3358	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTAATCTGTCTTTTG	-158668406	True	NA	-9	True	AATAAA	-15	NA	158671892	158666683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_158669765_158671615
transcript_157093.known	chr4	-	1876	8	FSM	ENSG00000145414.9	ENST00000274054.3	1876	8	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	24.2705835218232	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAATTCATGCCTTCTC	-163163273	True	NA	-26	True	ATTAAA	-22	NA	163166890	163128668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_163129349_163133153_163133257_163137198_163137251_163140222_163140384_163145781_163145865_163148340_163148435_163164216_163164392_163166362
transcript_157095.known	chr4	-	1159	4	FSM	ENSG00000145414.9	ENST00000502973.1	1159	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	60.4777277644883	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAACTTTTTGCTGTTCT	-163163135	False	NA	-7	True	AATAAA	-9	NA	163166752	163156963	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_163157455_163158224_163158328_163164216_163164392_163166362
transcript_157099.nic	chr4	-	716	2	ISM	ENSG00000145414.9	ENST00000502973.1	1159	4	-151	7253	-13	-7253	5prime_fragment	FALSE	canonical	3	161	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTACTTAGATTTATTA	-163163286	True	NA	NA	False	AAAACA	-22	NA	163166903	163164216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_163164392_163166362
transcript_157100.known	chr4	-	2329	7	FSM	ENSG00000145414.9	ENST00000509232.5	2329	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	47.8051601119935	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTGAATTAATTTGCAT	-163163214	True	NA	NA	False	AATAAA	-17	NA	163166831	163135025	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_163136321_163137198_163137251_163140222_163140384_163145781_163145865_163148340_163148435_163164216_163164392_163166362
transcript_157103.known	chr4	+	1890	4	FSM	ENSG00000164129.12	ENST00000338566.8	1890	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	6.0184900284226	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGTACTTTTGTCCAAAA	163343371	True	NA	NA	False	AGTAAA	-17	NA	163343891	163351934	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_163344001_163345713_163345754_163347451_163347523_163350264
transcript_157108.known	chr4	-	2762	3	FSM	ENSG00000164128.7	ENST00000296533.3	2762	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_2	4.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCTCTTTCAGTTTCAT	-163331356	True	NA	-2	True	ATTAAA	-27	NA	163332596	163323961	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_163325759_163325855_163326706_163332481
transcript_157109.nic	chr4	-	2899	3	NIC	ENSG00000164128.7	novel	2762	3	NA	NA	276	0	intron_retention	FALSE	canonical	3	27	junction_2	33.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCTCTTTCAGTTTCAT	-163344528	False	28	-2	True	ATTAAA	-27	NA	163344556	163323961	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_163325759_163325855_163326706_163344304
transcript_157110.nic	chr4	-	3110	2	NIC	ENSG00000164128.7	novel	2762	3	NA	NA	171	0	intron_retention	FALSE	canonical	3	85	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCTCTTTCAGTTTCAT	-163332789	True	NA	-2	True	ATTAAA	-27	NA	163332847	163323961	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_163326706_163332481
transcript_157113.nnic	chr4	+	2392	8	NNC	ENSG00000198498.10	novel	1749	7	NA	NA	86	3085	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_7	318.471284708172	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGTACTGAACATGCAGA	163494338	True	NA	27	True	NA	NA	NA	163494527	163523624	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_+_163494805_163507032_163507146_163512821_163512860_163514073_163514159_163515312_163515462_163517433_163517477_163519333_163520890_163523493
transcript_157116.known	chr4	+	933	7	FSM	ENSG00000198498.10	ENST00000509657.5	933	7	0	0	0	0	multi-exon	FALSE	canonical	2	32	junction_1	325.528501909672	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGATCTGCAGAAGTTG	163494429	False	NA	NA	False	AATAGA	-3	NA	163494441	163519720	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_163494560_163507032_163507146_163512821_163512860_163514073_163514159_163515312_163515462_163517433_163517477_163519333
transcript_157117.known	chr4	+	1749	7	FSM	ENSG00000198498.10	ENST00000358572.10	1749	7	0	0	0	0	multi-exon	FALSE	canonical	3	841	junction_3	64.0999653319372	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTACAGTCCTAATTTT	163483581	True	NA	16	True	AATAAA	-20	NA	163494689	163520539	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_163494805_163507032_163507146_163512821_163512860_163514073_163514159_163515312_163515462_163517433_163517477_163519333
transcript_157125.known	chr4	+	803	6	FSM	ENSG00000198498.10	ENST00000513272.5	803	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	354.91937112533	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTGATCTGCAGAAGTT	163483558	True	NA	NA	False	AATAGA	-2	NA	163494666	163519719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_163494805_163507032_163507146_163512821_163512860_163514073_163514159_163517433_163517477_163519333
transcript_157128.nic	chr4	+	510	2	ISM	ENSG00000198498.10	ENST00000508268.1	608	6	-306	10420	-40	-8322	5prime_fragment	FALSE	canonical	3	1022	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAAGTAAGTATCTTTTC	163494333	False	NA	NA	False	AAGAAA	-5	NA	163494401	163507139	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_163494805_163507032
transcript_157131.known	chr4	+	2432	3	FSM	ENSG00000248329.6	ENST00000507152.6	2432	3	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_2	23	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGCTGTCCTTACTTT	164872429	True	NA	16	True	AATAAA	-18	NA	164877177	164897527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_164877408_164878919_164879010_164895415
transcript_157134.known	chr4	+	551	2	FSM	ENSG00000248329.6	ENST00000515275.1	551	2	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAACAGCTATTTGGGGG	164872445	False	NA	101	True	NA	NA	NA	164877193	164879256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_164877408_164878919
transcript_157136.known	chr4	-	2237	3	FSM	ENSG00000183439.9	ENST00000508856.2	2237	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	15	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTGAAACATATATTACT	-164976910	True	NA	NA	False	ATTAAA	-45	NA	164977668	164968373	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_164970340_164976687_164976821_164977530
transcript_157140.known	chr4	+	2175	1	FSM	ENSG00000250486.5	ENST00000648094.1	2175	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTGCATTTTCTGTTTA	164956776	True	NA	NA	False	ATTAAA	-17	NA	164956947	164959122	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_164956900_164959100
transcript_157145.known	chr4	-	9953	6	FSM	ENSG00000170088.14	ENST00000306480.11	9953	6	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_2	1.89736659610103	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTATAATCACTGCTAT	-165111114	True	NA	NA	False	AATAAA	-17	NA	165112860	165070607	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_165079797_165085585_165085689_165088467_165088603_165100627_165100893_165102949_165103097_165112746
transcript_157150.known	chr4	-	789	6	FSM	ENSG00000170088.14	ENST00000505095.1	789	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	14.4582156575423	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGATTTAGGTGAGAATA	-165111108	True	NA	NA	False	NA	NA	NA	165112854	165085585	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_165085689_165088467_165088603_165100627_165100893_165102949_165103097_165111648_165111680_165112746
transcript_157156.known	chr4	+	3185	15	FSM	ENSG00000109466.14	ENST00000226725.11	3185	15	0	0	0	0	multi-exon	FALSE	canonical	2	46	junction_5	13.4740869972018	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTCACAGTGTTCTTG	165206196	True	NA	3	True	AATAAA	-14	NA	165207560	165323147	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_165207903_165219933_165220060_165228806_165228914_165238777_165238900_165263196_165263360_165294358_165294469_165297608_165297726_165299506_165299657_165305607_165305726_165310552_165310751_165311463_165311566_165313237_165313367_165314025_165314167_165317825_165317970_165322031
transcript_157165.known	chr4	+	2227	6	FSM	ENSG00000052802.13	ENST00000261507.11	2227	6	0	0	0	0	multi-exon	FALSE	canonical	3	1464	junction_1	93.9191141355156	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTGGTTTCTTTTCTTTT	165307773	True	NA	15	True	AATAAA	-2	NA	165327668	165343164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_165327765_165333339_165333626_165337788_165337938_165338651_165338779_165340220_165340376_165341750
transcript_157167.nic	chr4	+	2276	6	NIC	ENSG00000052802.13	novel	2227	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	126	junction_1	599.12322605621	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCACTTTGAGCTCTTGAA	165307771	True	NA	-26	True	ATTAAA	-39	NA	165327666	165343029	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_165327947_165333339_165333626_165337788_165337938_165338651_165338779_165340220_165340376_165341750
transcript_157169.known	chr4	+	1026	5	FSM	ENSG00000052802.13	ENST00000504317.1	1026	5	0	0	0	0	multi-exon	FALSE	canonical	3	1464	junction_1	99.119876916792	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAACTTAACTCATATTT	165307825	True	NA	NA	False	AATAAA	-1	NA	165327720	165340640	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_165327765_165333339_165333626_165337788_165337938_165338651_165338779_165340220
transcript_157171.known	chr4	+	1789	5	FSM	ENSG00000052802.13	ENST00000393766.6	1789	5	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_1	580.526216031628	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCACTTTGAGCTCTTGAA	165307790	True	NA	-26	True	ATTAAA	-39	NA	165327685	165343029	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_165327765_165337788_165337938_165338651_165338779_165340220_165340376_165341750
transcript_157177.known	chr4	+	2582	9	FSM	ENSG00000109472.14	ENST00000402744.9	2582	9	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_8	13.256484262428	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTGGACACAAACTCTAA	165378996	False	NA	NA	False	TATAAA	-16	NA	165379007	165498547	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_165379529_165464389_165464587_165467687_165467856_165482241_165482360_165484421_165484605_165487437_165487578_165493170_165493271_165495558_165495678_165497511
transcript_15718.known	chr1	-	2154	8	FSM	ENSG00000160818.17	ENST00000368232.9	2154	8	0	0	0	0	multi-exon	TRUE	canonical	3	457	junction_2	52.4423882144268	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTAACAGTCCAT	-156595732	True	NA	-10	True	AATGAA	-31	NA	156601479	156594300	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156595850_156596080_156596132_156596386_156596479_156598034_156598122_156598226_156598320_156598420_156598495_156598967_156599105_156601408
transcript_157193.nnic	chr4	+	2112	4	Antisense	novelGene_ENSG00000196104.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	123.986558411251	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGAACAAAGCCTCCAAGAAA	166716300	False	NA	NA	False	AATAAA	-1	NA	166716320	166744955	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr4_+_166716724_166721972_166722079_166725235_166725320_166743436
transcript_157195.nnic	chr4	+	2829	4	Antisense	novelGene_ENSG00000196104.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	123.986558411251	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGTTGCAATCCTAGTC	166705721	True	NA	NA	False	AATAAA	-43	NA	166716470	166745822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr4_+_166716724_166721972_166722079_166725235_166725320_166743436
transcript_15720.known	chr1	-	1159	8	FSM	ENSG00000160818.17	ENST00000438976.6	1159	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	192.284334531242	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAAGAAGCAGGAAAAGCA	-156595723	True	NA	-12	True	NA	NA	NA	156601470	156595212	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156595850_156596080_156596132_156596386_156596479_156598034_156598122_156598226_156598320_156598420_156598495_156598967_156599031_156601408
transcript_157203.nnic	chr4	+	2453	4	Antisense	novelGene_ENSG00000196104.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_3	248.966307403677	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAATTTCTTCTCCTGGC	166705622	True	NA	NA	False	ATTAAA	-10	NA	166716371	166852328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr4_+_166716724_166725235_166725320_166848906_166849000_166850404
transcript_157209.nnic	chr4	+	1375	3	Antisense	novelGene_ENSG00000196104.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_2	270	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTGATCATTTATATTA	166705721	True	NA	12	True	ATTAAA	-16	NA	166716470	166736654	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr4_+_166716724_166725235_166725320_166735616
transcript_157212.nnic	chr4	+	2006	3	Antisense	novelGene_ENSG00000196104.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	282	54	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGAACAAAGCCTCCAAGAAA	166716300	False	NA	NA	False	AATAAA	-1	NA	166716320	166744955	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr4_+_166716724_166725235_166725320_166743436
transcript_157214.nnic	chr4	+	2723	3	Antisense	novelGene_ENSG00000196104.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	282	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGTTGCAATCCTAGTC	166705721	True	NA	NA	False	AATAAA	-43	NA	166716470	166745822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr4_+_166716724_166725235_166725320_166743436
transcript_157216.nnic	chr4	+	1777	3	Antisense	novelGene_ENSG00000196104.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_2	280	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATGAAATGAAGCGAGAA	166705721	True	NA	NA	False	AAGAAA	-25	NA	166716470	166744902	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr4_+_166716724_166725235_166725320_166743462
transcript_157218.nnic	chr4	+	1874	3	Antisense	novelGene_ENSG00000196104.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_2	280	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGAACAAAGCCTCCAAGAAA	166705677	True	NA	NA	False	AATAAA	-1	NA	166716426	166744955	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr4_+_166716724_166725235_166725320_166743462
transcript_157225.known	chr4	+	4392	12	FSM	ENSG00000129116.19	ENST00000507735.6	4392	12	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_5	9.64664974173259	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCAGTTTTAGTTTTCTG	168830429	True	NA	5	True	AATAAA	-43	NA	168832027	168928445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_168832172_168877722_168878395_168890921_168891058_168894578_168894678_168898492_168898715_168903756_168903907_168913926_168914022_168915894_168916028_168921533_168921742_168924254_168924421_168924944_168925079_168926212
transcript_157231.nic	chr4	+	2021	10	ISM	ENSG00000129116.19	ENST00000507735.6	4392	12	-29	4058	-6	-1006	5prime_fragment	FALSE	canonical	3	71	junction_5	10.5303793326209	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATCACTCACTCACAGCA	168830400	True	NA	NA	False	AAGAAA	-6	NA	168831998	168924387	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_168832172_168877722_168878395_168890921_168891058_168894578_168894678_168898492_168898715_168903756_168903907_168913926_168914022_168915894_168916028_168921533_168921742_168924254
transcript_157235.nnic	chr4	-	1170	7	NNC	ENSG00000145439.12	novel	3440	5	NA	NA	-4	-2408	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_4	117.494207895066	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAATGTGTGACAAATTG	-169005866	True	NA	-14	True	TATAAA	-15	NA	169010279	168989997	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_168990329_168998201_168998286_169002070_169002206_169005884_169005915_169006754_169006892_169007635_169007757_169009947
transcript_157238.nnic	chr4	-	1155	6	NNC	ENSG00000145439.12	novel	3440	5	NA	NA	-19	-2408	at_least_one_novel_splicesite	FALSE	canonical	3	121	junction_2	76.1067671104219	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAATGTGTGACAAATTG	-169005881	True	NA	-14	True	TATAAA	-15	NA	169010294	168989997	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_168990329_168998201_168998286_169002070_169002206_169006754_169006892_169007635_169007757_169009947
transcript_157239.nic	chr4	-	939	5	NIC	ENSG00000145439.12	novel	1052	5	NA	NA	-72	-30827	combination_of_known_junctions	FALSE	canonical	2	15	junction_1	119.717375514167	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGCAGTCGACGAGCCAT	NA	False	NA	0	True	ATTAAA	-20	NA	169010347	168894619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_168894766_169002070_169002206_169006754_169006892_169007635_169007757_169009947
transcript_15724.known	chr1	-	934	7	FSM	ENSG00000160818.17	ENST00000415314.6	934	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	203.796807847642	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTGGCACCATGAAGAGG	-156595743	True	NA	17	True	AAAAAG	-3	NA	156601490	156595444	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156595850_156596080_156596132_156596386_156596479_156598226_156598320_156598420_156598495_156598967_156599105_156601408
transcript_157240.known	chr4	-	3440	5	FSM	ENSG00000145439.12	ENST00000306193.8	3440	5	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	63.5314882558248	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGATGTTAATTTTAT	-169005842	True	NA	-5	True	AATAAA	-19	NA	169010255	168987589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_168990329_169002070_169002206_169006754_169006892_169007635_169007757_169009947
transcript_157242.known	chr4	-	1052	5	FSM	ENSG00000145439.12	ENST00000504561.1	1052	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	143.099615652873	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATGACCCAAACACCTCC	-169005667	False	NA	NA	False	NA	NA	NA	169010080	169001574	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_169002206_169005884_169005915_169006754_169006892_169007635_169007757_169009947
transcript_157245.nic	chr4	-	2652	4	NIC	ENSG00000145439.12	novel	1602	4	NA	NA	-33	0	intron_retention	FALSE	canonical	3	18	junction_3	131.413681006034	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATTA	-169005895	True	NA	NA	False	NA	NA	NA	169010308	169001168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_169002206_169006754_169006892_169007635_169007757_169008951
transcript_157246.known	chr4	-	1602	4	FSM	ENSG00000145439.12	ENST00000504480.5	1602	4	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_1	18.4571575998762	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATTA	-169005841	True	NA	NA	False	NA	NA	NA	169010254	169001168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_169002206_169006754_169006892_169007635_169007757_169009947
transcript_157248.known	chr4	-	5120	12	FSM	ENSG00000154447.15	ENST00000284637.14	5120	12	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_6	8.50668186566515	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGTCCCTTGTGTCAGT	-169270068	True	NA	-1	True	ATTAAA	-19	NA	169270956	169094258	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_169096688_169106846_169107206_169116268_169116631_169117522_169117783_169120818_169120990_169122099_169122267_169130045_169130157_169136317_169136621_169155479_169155576_169156403_169156680_169268819_169269308_169270858
transcript_157253.nic	chr4	-	2761	10	ISM	ENSG00000154447.15	ENST00000284637.14	5120	12	-429	22010	-429	0	5prime_fragment	FALSE	canonical	3	44	junction_4	8.55194729106394	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGACCATACTTACTTAC	-169271375	False	24	3	True	NA	NA	NA	169271385	169116268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_169116631_169117522_169117783_169120818_169120990_169122099_169122267_169130045_169130157_169136317_169136621_169155479_169155576_169156403_169156680_169268819_169269308_169270858
transcript_157257.known	chr4	-	6096	36	FSM	ENSG00000137601.18	ENST00000507142.6	6096	36	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_16	9.0469974723831	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAGGATAACTTTGTCTT	-169611280	True	NA	NA	False	AATAAA	-19	NA	169612583	169392808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_169394524_169400224_169400358_169400520_169400652_169401651_169401861_169406595_169406748_169424552_169424801_169426145_169426235_169433544_169433666_169438082_169438260_169463242_169463396_169477123_169477353_169477431_169477498_169479402_169479535_169507036_169507133_169507714_169507793_169508247_169508332_169508768_169508853_169537808_169537912_169555719_169555852_169555931_169556096_169561479_169561555_169561686_169561738_169561831_169561892_169562136_169562197_169576927_169577080_169580841_169580903_169585348_169585550_169587558_169587614_169588648_169588736_169589446_169589515_169590725_169590810_169599099_169599198_169602007_169602105_169602513_169602679_169612019_169612144_169612221
transcript_157258.known	chr4	+	3635	14	FSM	ENSG00000109572.15	ENST00000347613.8	3635	14	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_13	32.2895553486787	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTCTCTCTCTACTGAG	169616980	True	NA	NA	False	NA	NA	NA	169620525	169720545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_169621064_169635912_169636089_169680049_169680208_169687657_169687758_169689042_169689231_169690529_169690653_169692113_169692321_169695611_169695693_169697188_169697735_169703997_169704185_169706867_169707267_169713078_169713296_169717791_169717868_169719906
transcript_157261.known	chr4	+	6635	13	FSM	ENSG00000109572.15	ENST00000513761.6	6635	13	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_6	13.9071823969567	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAGAGTAGATCATTTAT	169617032	True	NA	NA	False	AGTAAA	-17	NA	169620577	169723673	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_169621064_169635912_169636089_169680049_169680208_169687657_169687758_169689042_169689231_169690529_169690653_169692113_169692321_169695611_169695693_169697188_169697735_169703997_169704185_169706867_169707267_169713078_169713296_169719906
transcript_157269.known	chr4	-	1216	8	FSM	ENSG00000056050.7	ENST00000393381.3	1216	8	0	0	0	0	multi-exon	FALSE	canonical	3	543	junction_4	55.0213316703214	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAAGGTTCTTCTGCCTGG	-169749641	True	NA	-9	True	AATAAA	-18	NA	169757944	169729469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_169729710_169731703_169731877_169737659_169737748_169741956_169742108_169748743_169748843_169750535_169750726_169753675_169753836_169757829
transcript_157271.nnic	chr4	-	1107	7	NIC	ENSG00000056050.7	novel	1216	8	NA	NA	10	0	combination_of_known_splicesites	TRUE	canonical	3	45	junction_4	240.745139560952	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAAGGTTCTTCTGCCTGG	-169749631	True	NA	-9	True	AATAAA	-18	NA	169757934	169729469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_169729710_169731703_169731877_169737659_169737748_169741956_169742108_169750535_169750726_169753675_169753836_169757829
transcript_157272.nic	chr4	-	646	5	ISM	ENSG00000056050.7	ENST00000393381.3	1216	8	-63	12619	-63	8383	5prime_fragment	FALSE	canonical	3	543	junction_1	64.9975961093947	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTAGAGAAATAACGGATAA	-169749704	True	NA	NA	False	NA	NA	NA	169758007	169742088	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_169742108_169748743_169748843_169750535_169750726_169753675_169753836_169757829
transcript_157274.nic	chr4	-	627	4	ISM	ENSG00000056050.7	ENST00000393381.3	1216	8	-63	19274	-63	1728	5prime_fragment	FALSE	canonical	3	614	junction_1	40.0083324654586	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAATATTTTAATTTAT	-169749704	True	NA	NA	False	NA	NA	NA	169758007	169748743	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_169748843_169750535_169750726_169753675_169753836_169757829
transcript_157275.known	chr4	-	489	3	FSM	ENSG00000056050.7	ENST00000506125.1	489	3	0	0	0	0	multi-exon	FALSE	canonical	3	691	junction_2	7	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTAGCCTCACCCAAGG	-169749601	True	NA	NA	False	GATAAA	-7	NA	169757904	169750471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_169750726_169753675_169753836_169757829
transcript_157278.nnic	chr4	+	694	3	NNC	ENSG00000289508.1	novel	666	3	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	4.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAAAGCCTGTTTGGTGG	169939431	True	NA	4	True	AATAAA	-15	NA	169940276	169941677	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_+_169940379_169940520_169940661_169941225
transcript_157289.known	chr4	-	6301	3	FSM	ENSG00000198948.12	ENST00000361618.4	6301	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	7	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAATGTGTGTTGTGTCCC	-170025479	True	NA	-32	True	AATAAA	-18	NA	170026395	169986601	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_169992310_170005579_170006011_170026233
transcript_157290.known	chr4	-	667	3	FSM	ENSG00000198948.12	ENST00000504999.1	667	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGTAGGCTTTAAAGTTG	-170025423	True	NA	NA	False	NA	NA	NA	170026339	170005583	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_170006011_170006602_170006737_170026233
transcript_157301.known	chr4	-	2101	14	FSM	ENSG00000109576.14	ENST00000353187.6	2101	14	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_13	16.9597504726536	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACATACCTAAAGGCATCA	-170089103	True	NA	NA	False	AATAAA	-12	NA	170090221	170060228	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_170060970_170061891_170061994_170064718_170064826_170066413_170066479_170067326_170067389_170068590_170068688_170069147_170069231_170070586_170070653_170073135_170073346_170078508_170078584_170087115_170087249_170088395_170088565_170089623_170089737_170090143
transcript_157303.known	chr4	-	2250	13	FSM	ENSG00000109576.14	ENST00000337664.9	2250	13	0	0	0	0	multi-exon	TRUE	canonical	3	54	junction_7	14.0564338768172	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAAGGCATCAGACCCAT	-170088838	False	NA	NA	False	AATAAA	-19	NA	170089956	170060221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_170060970_170061891_170061994_170064718_170064826_170066413_170066479_170067326_170067389_170068590_170068688_170069147_170069231_170070586_170070653_170073135_170073346_170078508_170078584_170087115_170087249_170088395_170088565_170089623
transcript_157306.nnic	chr4	-	808	6	NNC	ENSG00000109576.14	novel	2250	13	NA	NA	26	-2021	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_5	25.7184758490856	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTGGATACTCATAATTT	NA	False	NA	-2	True	AATAAA	-30	NA	170090270	170075270	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_170075462_170078508_170078584_170087115_170087249_170088395_170088565_170089623_170089737_170090143
transcript_15731.known	chr1	+	1111	6	FSM	ENSG00000163382.13	ENST00000368235.8	1111	6	0	0	0	0	multi-exon	FALSE	canonical	3	1832	junction_5	53.9874059387928	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTGTGCTGTCCTTTA	156575942	True	NA	33	True	AATGAA	-21	NA	156591775	156594299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156591987_156592100_156592210_156592364_156592476_156592556_156592671_156593407_156593556_156593881
transcript_157310.known	chr4	-	810	6	FSM	ENSG00000109576.14	ENST00000507375.5	810	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	34.960549194771	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAACGCAAAAAGGAAATCT	NA	False	NA	NA	False	NA	NA	NA	170090296	170073160	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_170073346_170078508_170078584_170087115_170087249_170088395_170088565_170089623_170089737_170090161
transcript_157311.known	chr4	+	1316	3	FSM	ENSG00000250266.3	ENST00000667527.2	2474	3	0	1158	0	0	multi-exon	FALSE	canonical	3	25	junction_2	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCGTTGCGCATGTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	170226534	170283723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_170226784_170276581_170276676_170282750
transcript_157312.known	chr4	+	2905	2	FSM	ENSG00000174473.16	ENST00000511251.1	2905	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACAGAATGCAGTCTTC	NA	False	NA	NA	False	AATAAA	-28	NA	171812253	171815579	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_171813991_171814411
transcript_157315.nic	chr4	+	2536	12	NIC	ENSG00000109586.12	novel	4249	12	NA	NA	-522	-279	combination_of_known_junctions	FALSE	canonical	3	93	junction_6	192.064297085315	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATAACCTACCTACTGAC	173167041	True	NA	NA	False	AATAAA	-1	NA	173168288	173321732	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_173168962_173247979_173248441_173292107_173292275_173295395_173295527_173295763_173295844_173297794_173297978_173302046_173302165_173303995_173304119_173313957_173314177_173317633_173317733_173318430_173318560_173321579
transcript_157317.nic	chr4	+	3455	12	NIC	ENSG00000109586.12	novel	4249	12	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	3	93	junction_6	192.064297085315	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACAACTGT	173155055	True	NA	NA	False	ATTAAA	-20	NA	173168764	173323127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_173168962_173247979_173248441_173292107_173292275_173295395_173295527_173295763_173295844_173297794_173297978_173302046_173302165_173303995_173304119_173313957_173314177_173317633_173317733_173318430_173318560_173321579
transcript_157319.nic	chr4	+	4295	12	NIC	ENSG00000109586.12	novel	4249	12	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	3	93	junction_6	192.064297085315	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTTTTTTTGGTGCTTGT	173155055	True	NA	16	True	AATAAA	-19	NA	173168764	173323967	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_173168962_173247979_173248441_173292107_173292275_173295395_173295527_173295763_173295844_173297794_173297978_173302046_173302165_173303995_173304119_173313957_173314177_173317633_173317733_173318430_173318560_173321579
transcript_157321.known	chr4	+	4249	12	FSM	ENSG00000109586.12	ENST00000265000.9	4249	12	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_6	55.201059997009	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTTTTTTTGGTGCTTGT	173155101	True	NA	16	True	AATAAA	-19	NA	173168810	173323967	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_173168962_173247979_173248441_173292107_173292275_173295395_173295527_173295763_173295844_173298114_173298298_173302046_173302165_173303995_173304119_173313957_173314177_173317633_173317733_173318430_173318560_173321579
transcript_157345.known	chr4	+	1567	6	FSM	ENSG00000109586.12	ENST00000512285.5	1567	6	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_5	190.206834787817	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCGTTATTAAAACTGTA	173155101	True	NA	NA	False	NA	NA	NA	173168810	173298371	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_173168962_173247979_173248441_173292107_173292275_173295395_173295527_173295763_173295844_173297794
transcript_157349.nic	chr4	+	825	3	ISM	ENSG00000109586.12	ENST00000512285.5	1567	6	-46	6097	-46	-3486	5prime_fragment	FALSE	canonical	3	562	junction_2	24.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGGCTGTGAAACTCAC	173155055	True	NA	NA	False	AATAAA	-2	NA	173168764	173292274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_173168962_173247979_173248441_173292107
transcript_15735.known	chr1	+	901	6	FSM	ENSG00000163382.13	ENST00000368234.7	901	6	0	0	0	0	multi-exon	FALSE	canonical	1	20	junction_4	764.197252023324	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAGAACTGTGGATTCC	156575928	True	NA	15	True	AATAAA	-17	NA	156591761	156594131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156591987_156592100_156592210_156592364_156592476_156592556_156592671_156593463_156593556_156593881
transcript_157353.known	chr4	-	1175	5	FSM	ENSG00000164104.12	ENST00000446922.6	1175	5	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_4	1089.88654799479	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATTGTCTTTGTCTTA	-173312267	True	NA	-10	True	AATAAA	-14	NA	173334391	173331700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_173332239_173332820_173332996_173333068_173333215_173333499_173333670_173334245
transcript_157354.known	chr4	-	1441	5	FSM	ENSG00000164104.12	ENST00000296503.10	1441	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1156.98714340307	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATATATATACACATATAT	-173312234	True	NA	NA	False	NA	NA	NA	173334358	173331375	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_173332239_173332820_173332996_173333068_173333215_173333499_173333670_173334271
transcript_157362.known	chr4	-	629	4	FSM	ENSG00000164104.12	ENST00000506267.1	629	4	0	0	0	0	multi-exon	FALSE	canonical	1	34	junction_3	1235.41814783497	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAGTCAGCCAAAGATAAA	-173334176	False	NA	-63	True	AAGAAA	-20	NA	173334249	173332888	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_173332996_173333068_173333215_173333499_173333670_173334043
transcript_157364.nic	chr4	-	1350	4	ISM	ENSG00000164104.12	ENST00000296503.10	1441	5	-788	1461	-714	52	5prime_fragment	FALSE	canonical	0	0	junction_3	1251.44458748902	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAGAAATATGAAAAGGTAC	-173335073	True	NA	-11	True	GATAAA	-33	NA	173335146	173332836	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_173332996_173333068_173333215_173333499_173333670_173334271
transcript_157367.known	chr4	-	1841	3	FSM	ENSG00000164104.12	ENST00000511316.1	1841	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1337	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTTCTATTGTCTTTGT	-173312308	True	NA	-14	True	AATAAA	-10	NA	173334432	173331704	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_173333215_173333499_173333670_173334271
transcript_157368.known	chr4	-	1032	4	FSM	ENSG00000164104.12	ENST00000438704.6	1032	4	0	0	0	0	multi-exon	FALSE	canonical	3	2635	junction_2	28.6395220320141	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATTGTCTTTGTCTTA	-173333599	False	NA	-10	True	AATAAA	-14	NA	173333672	173331700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_173332239_173332820_173332996_173333068_173333215_173333499
transcript_157369.known	chr4	+	1097	4	FSM	ENSG00000164105.4	ENST00000296504.4	1097	4	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_1	25.152865973218	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGCTTCAGTGTATTTA	173367759	True	NA	NA	False	AATAAA	-15	NA	173370953	173377532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_173371498_173373389_173373516_173373938_173374038_173377204
transcript_157370.known	chr4	-	587	2	FSM	ENSG00000272870.4	ENST00000608794.1	587	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTATTTGTTGCTATGC	-173369527	True	NA	NA	False	NA	NA	NA	173369815	173363993	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_173364199_173369433
transcript_157371.known	chr4	-	1980	6	FSM	ENSG00000164117.14	ENST00000393674.7	1980	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	2.24499443206436	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTTGCTTATATGTG	-174283031	True	NA	2	True	AATAAA	-28	NA	174283667	174236657	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_174237600_174238993_174239191_174241099_174241219_174259698_174259826_174262763_174263101_174283409
transcript_157375.known	chr4	+	4298	12	FSM	ENSG00000164118.13	ENST00000503780.6	4298	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	30.7928294755035	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTTGTTTCATGCCATT	174282391	True	NA	14	True	AATAAA	-15	NA	174283910	174320328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_174283944_174297965_174298063_174299071_174299211_174302038_174302187_174303702_174303850_174304246_174304370_174308688_174308860_174309849_174310057_174310782_174310859_174316165_174316291_174316529_174316568_174317334
transcript_157378.known	chr4	+	3824	14	FSM	ENSG00000164118.13	ENST00000396791.7	3824	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	37.1596587267212	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTCTATTTCTCTGTTGA	174282385	True	NA	NA	False	AATAAA	-20	NA	174283904	174332293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_174284062_174297965_174298063_174299071_174299211_174302038_174302187_174303702_174303850_174304246_174304370_174308688_174308860_174309849_174310057_174310782_174310859_174316165_174316291_174316529_174316568_174317334_174318666_174318834_174319088_174331481
transcript_157381.nic	chr4	+	4423	12	ISM	ENSG00000164118.13	ENST00000396791.7	3824	14	-1	11965	0	0	intron_retention	FALSE	canonical	3	36	junction_1	24.6884722321375	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTTGTTTCATGCCATT	174282384	True	NA	14	True	AATAAA	-15	NA	174283903	174320328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_174284062_174297965_174298063_174299071_174299211_174302038_174302187_174303702_174303850_174304246_174304370_174308688_174308860_174309849_174310057_174310782_174310859_174316165_174316291_174316529_174316568_174317334
transcript_157385.known	chr4	+	3290	11	FSM	ENSG00000164118.13	ENST00000457424.6	3290	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	34.6613617735945	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTTTATTTTATGCAT	174282384	True	NA	NA	False	AATAAA	-13	NA	174283903	174333380	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_174284062_174297965_174298063_174299071_174299211_174302038_174302187_174303702_174303850_174304246_174304370_174308688_174308860_174309849_174310057_174310782_174310859_174316165_174316291_174331481
transcript_157386.known	chr4	+	600	4	FSM	ENSG00000164118.13	ENST00000505124.5	600	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	52.9297227987787	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAATTGTGTGATGAAAAA	174283521	True	NA	NA	False	NA	NA	NA	174283729	174303801	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_174283944_174299071_174299211_174302038_174302187_174303702
transcript_157387.known	chr4	-	2619	7	FSM	ENSG00000164120.14	ENST00000296522.11	2619	7	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	3.43592135468138	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTTTCTTGTATTTTT	-174522475	False	NA	NA	False	ATTAAA	-21	NA	174522488	174490174	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_174492095_174493150_174493315_174495547_174495625_174508695_174508793_174517970_174518078_174521943_174522068_174522358
transcript_157391.known	chr4	-	1171	6	FSM	ENSG00000164120.14	ENST00000296521.11	1171	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	7.81280999384984	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTTCTTAGAGTAGTAT	-174522368	True	NA	NA	False	NA	NA	NA	174522487	174491457	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_174492095_174495547_174495625_174508695_174508793_174517970_174518078_174521943_174522068_174522358
transcript_157392.known	chr4	-	2854	8	FSM	ENSG00000150625.17	ENST00000280187.11	2854	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	13.5962179615194	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAGTGTATCTGTTTTT	-176002077	False	NA	1	True	AATAAA	-35	NA	176002332	175632933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_175635058_175640128_175640195_175640752_175640830_175651833_175651988_175673679_175673837_175701574_175701768_175812190_175812250_176002308
transcript_157393.nic	chr4	-	2259	6	ISM	ENSG00000150625.17	ENST00000515090.5	1500	7	85908	-1099	-47445	0	3prime_fragment	FALSE	canonical	3	22	junction_4	5.89915248150105	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTTTGTACAATGACTAG	NA	False	NA	-11	True	AATAAA	-18	NA	175701768	175633446	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_175635058_175640128_175640195_175640752_175640830_175651833_175651988_175673679_175673837_175701574
transcript_157397.nnic	chr4	+	3852	6	NNC	ENSG00000129128.13	novel	4569	5	NA	NA	-25	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	259.672409007965	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGCGTTGTGTTTCTAA	176312032	True	NA	11	True	AATAAA	-14	NA	176319940	176332241	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_+_176320220_176322169_176322244_176324180_176324258_176327161_176327278_176328197_176330460_176331197
transcript_157398.nnic	chr4	+	4453	6	NNC	ENSG00000129128.13	novel	4569	5	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	259.672409007965	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTTGTGTTTCTAATGTG	176312053	True	NA	15	True	AATAAA	-18	NA	176319961	176332245	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_+_176320220_176322169_176322244_176324180_176324258_176327161_176327278_176328197_176331078_176331197
transcript_157399.known	chr4	+	4569	5	FSM	ENSG00000129128.13	ENST00000503362.2	4569	5	0	0	0	0	multi-exon	FALSE	canonical	3	616	junction_1	26.3581107061944	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTTGTGTTTCTAATGTG	176312057	True	NA	15	True	AATAAA	-18	NA	176319965	176332245	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_176320220_176322169_176322244_176324180_176324258_176327161_176327278_176328197
transcript_157403.known	chr4	+	589	4	FSM	ENSG00000129128.13	ENST00000513139.1	589	4	0	0	0	0	multi-exon	FALSE	canonical	3	616	junction_1	20.6774165590278	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGGAAAGAAGTATTTATG	176312093	True	NA	NA	False	AGTAAA	-11	NA	176320001	176327381	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_176320220_176322169_176322244_176324180_176324258_176327161
transcript_157407.known	chr4	+	2363	10	FSM	ENSG00000109674.4	ENST00000264596.4	2363	10	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	12.9881237299577	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACAAGTCTATTTTTAAA	177307163	True	NA	NA	False	ATTAAA	-25	NA	177309873	177362936	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_177310110_177322458_177322581_177335687_177335823_177336107_177336322_177339782_177339858_177341475_177341643_177351379_177351550_177353307_177353729_177360502_177360678_177362288
transcript_157416.known	chr4	-	2037	9	FSM	ENSG00000038002.9	ENST00000264595.7	2037	9	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_7	7.37288105152931	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGAATTTCAGCTGTTT	-177441614	True	NA	-4	True	AATAAA	-22	NA	177442437	177430773	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_177431809_177433213_177433348_177434381_177434490_177436275_177436352_177437404_177437520_177438744_177438858_177439575_177439689_177440272_177440427_177442248
transcript_15742.known	chr1	+	1012	5	FSM	ENSG00000163382.13	ENST00000368233.3	1012	5	0	0	0	0	multi-exon	FALSE	canonical	3	1915	junction_4	31.9570023625496	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGGATGGGACGTGGAGA	156575944	True	NA	NA	False	NA	NA	NA	156591777	156593876	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156591987_156592100_156592210_156592364_156592476_156592556_156592671_156593407
transcript_157420.known	chr4	-	805	5	FSM	ENSG00000177822.9	ENST00000513752.5	805	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	11.5108644332213	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAACGCAGCCGGTCGTG	-182143857	True	NA	NA	False	NA	NA	NA	182144500	182141185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_182141485_182143437_182143546_182143702_182143845_182144046_182144141_182144338
transcript_157422.known	chr4	-	2260	4	FSM	ENSG00000177822.9	ENST00000315302.6	2260	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	5.71547606649408	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGAAAAAAATACTCTAGAA	-182143823	True	NA	NA	False	NA	NA	NA	182144466	182141649	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_182143546_182143702_182143845_182144046_182144141_182144338
transcript_157438.known	chr4	+	1237	4	FSM	ENSG00000218336.9	ENST00000513201.1	1237	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	16.7597401199687	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTAACTTTTCACCAGC	182143057	False	NA	NA	False	AAAACA	-24	NA	182143986	182350316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_182144162_182323945_182324253_182346650_182346930_182349840
transcript_157443.nic	chr4	+	1929	2	ISM	ENSG00000218336.9	ENST00000512480.5	651	3	-41	21161	-41	-21161	5prime_fragment	FALSE	canonical	3	30	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAACTCCACATTGTGGA	182143278	True	NA	NA	False	AATAAA	-14	NA	182144648	182325768	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_182144755_182323945
transcript_157445.nic	chr4	-	2335	8	NIC	ENSG00000129187.15	novel	794	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_7	233.10994165406	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTACCAAAGCATGTACAT	-182917006	True	NA	-20	True	ATTAAA	-17	NA	182917477	182890103	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_182891478_182893030_182893128_182894488_182894606_182914922_182915059_182915460_182915576_182916418_182916540_182916672_182916858_182917287
transcript_157450.nic	chr4	-	2606	7	NIC	ENSG00000129187.15	novel	794	7	NA	NA	27	0	intron_retention	FALSE	canonical	3	26	junction_6	216.52405563047	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTACCAAAGCATGTACAT	-182915191	True	NA	-20	True	ATTAAA	-17	NA	182917318	182890103	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_182891478_182893030_182893128_182894488_182894606_182914922_182915059_182915460_182915576_182916418_182916540_182916672
transcript_157451.known	chr4	-	794	7	FSM	ENSG00000129187.15	ENST00000510370.5	794	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	219.835102343148	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGATTATCGTCTTCTAA	-182915262	True	NA	NA	False	NA	NA	NA	182917389	182891371	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_182891478_182893030_182893128_182894488_182894606_182914922_182915059_182915460_182915576_182916418_182916540_182917287
transcript_157458.nic	chr4	-	2508	6	NIC	ENSG00000129187.15	novel	1931	6	NA	NA	4	0	intron_retention	FALSE	canonical	3	49	junction_5	186.557873058201	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTACCAAAGCATGTACAT	-182915214	True	NA	-20	True	ATTAAA	-17	NA	182917341	182890103	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_182891478_182893030_182893128_182894488_182894606_182914922_182915059_182915460_182915576_182916672
transcript_157459.known	chr4	-	1931	6	FSM	ENSG00000129187.15	ENST00000357067.7	1931	6	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_5	75.687779726981	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTACCAAAGCATGTACAT	-182915252	True	NA	-20	True	ATTAAA	-17	NA	182917379	182890103	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_182891478_182893030_182893128_182894488_182894606_182914922_182915059_182915460_182915576_182917287
transcript_157460.known	chr4	-	1928	6	FSM	ENSG00000129187.15	ENST00000438320.7	1928	6	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_5	151.596306023597	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACATTTTTATGTTATTA	-182915259	True	NA	-7	True	ATTAAA	-30	NA	182917386	182890090	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_182891478_182893030_182893128_182894488_182894606_182914922_182915059_182915460_182915576_182917310
transcript_157467.known	chr4	-	1829	5	FSM	ENSG00000129187.15	ENST00000500813.6	1829	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	187.58797935902	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATTTTCTGCTCCTGTCC	-182915242	True	NA	-13	True	NA	NA	NA	182917369	182890059	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_182891478_182893030_182893128_182894488_182894606_182915460_182915576_182917287
transcript_157468.known	chr4	-	879	5	FSM	ENSG00000129187.15	ENST00000507631.5	879	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	201.897715440269	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTGTGTTCTTAATGGG	-182916925	False	NA	-21	True	AATAAA	-6	NA	182917396	182891013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_182891478_182893030_182893128_182894488_182894606_182915460_182915576_182917310
transcript_157472.known	chr4	-	2183	1	FSM	ENSG00000251359.4	ENST00000578387.1	2183	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACACACTTTGCTGCTGCC	NA	False	NA	NA	False	ATTAAA	-16	NA	183099199	183097016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_183097000_183099200
transcript_157477.known	chr4	+	8862	23	FSM	ENSG00000151718.16	ENST00000403733.8	8862	23	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_2	38.2951780405448	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTCTACACCTTAACTCA	183090573	True	NA	6	True	AATAAA	-17	NA	183099256	183320777	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_183099623_183193598_183193709_183207952_183208157_183208948_183209026_183240182_183240263_183245415_183245546_183248713_183248861_183249919_183249994_183253756_183254000_183259638_183259729_183260909_183261533_183264977_183265108_183265687_183265769_183265864_183265952_183268970_183269164_183271079_183271242_183280775_183280898_183282707_183282907_183284225_183284391_183285966_183286060_183289392_183289636_183312340_183312469_183315662
transcript_157481.known	chr4	+	6356	23	FSM	ENSG00000151718.16	ENST00000448232.6	6356	23	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_17	84.1270683927809	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACTGGTTTCTGCACTTT	183099477	False	NA	5	True	AATACA	-10	NA	183099491	183318434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_183099623_183193598_183193709_183207952_183208157_183208948_183209026_183240182_183240263_183245415_183245546_183248713_183248861_183249919_183249994_183253756_183254000_183259638_183259729_183260909_183261533_183264977_183265108_183265687_183265769_183265864_183265952_183268970_183269164_183271079_183271242_183280775_183280970_183282707_183282907_183284225_183284391_183285966_183286060_183289392_183289636_183312340_183312469_183315662
transcript_157493.nic	chr4	+	3042	17	ISM	ENSG00000151718.16	ENST00000448232.6	6356	23	-411	37590	-176	-542	5prime_fragment	FALSE	canonical	3	298	junction_2	41.4162841615469	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAAGAATCAGG	183099030	False	NA	27	True	NA	NA	NA	183099080	183280844	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_183099623_183193598_183193709_183207952_183208157_183208948_183209026_183240182_183240263_183245415_183245546_183248713_183248861_183249919_183249994_183253756_183254000_183259638_183259729_183260909_183261533_183264977_183265108_183265687_183265769_183265864_183265952_183268970_183269164_183271079_183271242_183280775
transcript_157495.nic	chr4	+	2845	16	ISM	ENSG00000151718.16	ENST00000448232.6	6356	23	-347	47257	-112	1139	5prime_fragment	FALSE	canonical	3	298	junction_2	42.6749991863568	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATGAAGAAAATGAGGACT	183090461	True	NA	NA	False	NA	NA	NA	183099144	183271177	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_183099623_183193598_183193709_183207952_183208157_183208948_183209026_183240182_183240263_183245415_183245546_183248713_183248861_183249919_183249994_183253756_183254000_183259638_183259729_183260909_183261533_183264977_183265108_183265687_183265769_183265864_183265952_183268970_183269164_183271079
transcript_157501.nic	chr4	+	2517	11	ISM	ENSG00000151718.16	ENST00000513834.5	4887	23	-411	55455	-176	-8309	5prime_fragment	FALSE	canonical	3	298	junction_2	21.3936906586965	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTAGTAGACTTAATCAT	183099030	False	NA	1	True	AATAAA	-13	NA	183099080	183261729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_183099623_183193598_183193709_183207952_183208157_183208948_183209026_183240182_183240263_183245415_183245546_183248713_183248861_183249919_183249994_183253756_183254000_183259638_183259729_183260909
transcript_157503.nic	chr4	+	1143	6	ISM	ENSG00000151718.16	ENST00000513834.5	4887	23	-411	71639	-176	0	5prime_fragment	FALSE	canonical	3	298	junction_2	22.8648201392445	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACATTATAAAACATTTTG	183099030	False	NA	NA	False	AAAAAG	-21	NA	183099080	183245545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_183099623_183193598_183193709_183207952_183208157_183208948_183209026_183240182_183240263_183245415
transcript_157505.known	chr4	+	2646	3	FSM	ENSG00000168564.6	ENST00000302350.4	2646	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	36.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTTTTTTTTCTCCAA	183442113	True	NA	20	True	ATTAAA	-30	NA	183444634	183448198	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_183445070_183445534_183445635_183446087
transcript_157506.known	chr4	+	3542	3	FSM	ENSG00000168564.6	ENST00000504169.2	3542	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	26.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTGGTTTGGTAATTTC	183442114	True	NA	NA	False	AATAAA	-19	NA	183444635	183449064	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_183445070_183445534_183445666_183446087
transcript_157511.known	chr4	-	559	3	FSM	ENSG00000232648.4	ENST00000457303.3	559	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGGCGACAGAGCAAGAC	-183504192	True	NA	NA	False	NA	NA	NA	183504494	183494937	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_183495068_183497559_183497670_183504175
transcript_157512.known	chr4	+	2458	2	FSM	ENSG00000168556.7	ENST00000302327.4	2458	2	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTTTGTCCTTCATTCT	183503872	True	NA	NA	False	NA	NA	NA	183505057	183512429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_183505368_183510281
transcript_157515.known	chr4	+	599	2	FSM	ENSG00000168556.7	ENST00000412117.1	599	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAAGAAATCCAAGTC	183506055	True	NA	NA	False	NA	NA	NA	183506081	183510643	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_183506319_183510281
transcript_157518.known	chr4	-	805	7	FSM	ENSG00000182552.15	ENST00000514322.1	805	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	67.6578401468251	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACACAATTTTTTGTAT	-183657517	True	NA	-64	True	NA	NA	NA	183659203	183641338	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_183641469_183646350_183646354_183646487_183646538_183649450_183649569_183650983_183651132_183655880_183655962_183658928
transcript_15752.known	chr1	+	3297	14	FSM	ENSG00000132692.19	ENST00000329117.10	3297	14	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_8	6.59657433062103	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGATGCTTCTGTGTGTA	156641955	True	NA	7	True	AATAAA	-22	NA	156642116	156659528	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156642276_156646046_156646146_156646800_156647176_156647507_156647683_156647982_156648111_156648567_156648862_156651455_156651690_156652247_156652893_156656281_156656390_156656937_156657097_156657674_156657758_156658126_156658272_156658542_156658734_156659026
transcript_157520.known	chr4	-	2590	7	FSM	ENSG00000182552.15	ENST00000327570.13	2590	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	60.4081028413316	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTCTACACATTTTATT	-183657492	True	NA	0	True	AATAAA	-20	NA	183659178	183639635	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_183641469_183646487_183646538_183649450_183649569_183650983_183651132_183651217_183651328_183655880_183655962_183658928
transcript_157526.known	chr4	-	1551	6	FSM	ENSG00000182552.15	ENST00000510968.5	1551	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	55.2615598766448	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAATGCTGAACTGTTA	-183657465	False	NA	NA	False	NA	NA	NA	183659151	183640459	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_183641469_183646350_183646354_183646487_183646538_183649450_183649569_183650983_183651132_183658928
transcript_15753.known	chr1	+	2563	8	FSM	ENSG00000132692.19	ENST00000361588.5	2563	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	3.45820526768863	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGGTACCCTCTGTCTC	156642081	False	NA	13	True	AATAAA	-27	NA	156642242	156653472	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156642276_156646046_156646146_156646800_156647176_156647507_156647683_156647982_156648111_156648567_156648862_156651455_156651690_156652247
transcript_157532.known	chr4	+	4523	30	FSM	ENSG00000168538.16	ENST00000334690.11	4523	30	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	14.9700453979011	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGCTTGTCTGTCTCTAT	183655635	True	NA	16	True	AATAAA	-16	NA	183659292	183713589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_183659448_183663846_183664072_183666256_183666427_183667059_183667131_183668002_183668118_183674712_183674813_183675163_183675238_183677457_183677555_183679352_183679487_183680119_183680268_183682731_183682826_183683974_183684055_183684144_183684224_183684304_183684360_183684695_183684842_183685083_183685146_183685270_183685404_183686617_183686749_183691315_183691472_183692959_183693148_183693588_183693738_183693916_183694039_183694603_183694724_183697502_183697569_183697678_183697836_183701696_183701809_183704978_183705071_183706806_183706941_183708406_183708575_183712599
transcript_157539.known	chr4	+	4435	31	FSM	ENSG00000168538.16	ENST00000357207.8	4435	31	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_29	33.874424964369	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGTCTCTATCTTTT	183655609	True	NA	21	True	AATAAA	-21	NA	183659266	183713594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_183659448_183663846_183664072_183666256_183666427_183667059_183667131_183668002_183668118_183674712_183674813_183675163_183675238_183677457_183677555_183679352_183679487_183680119_183680268_183682731_183682826_183683974_183684055_183684144_183684224_183684304_183684360_183684695_183684842_183685083_183685146_183685270_183685404_183686617_183686749_183691315_183691472_183692959_183693148_183693588_183693738_183693916_183694039_183694603_183694724_183697502_183697569_183697678_183697836_183701696_183701809_183704978_183705071_183706806_183706941_183708406_183708417_183708535_183708575_183712599
transcript_157546.nic	chr4	+	4298	5	NIC	ENSG00000173320.12	novel	10507	4	NA	NA	452	277	combination_of_known_junctions	FALSE	canonical	2	12	junction_4	6.04152298679729	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTTAAAAAAAAAAAACAAAA	183904028	True	NA	NA	False	AAAACA	-18	NA	183905758	184017720	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_183906957_184001324_184001478_184009157_184011424_184011586_184011636_184017088
transcript_157549.known	chr4	+	10507	4	FSM	ENSG00000173320.12	ENST00000308497.9	10507	4	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_3	5.43650214343336	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTAAGTGGATTTTTTT	183905166	True	NA	16	True	ATTAAA	-16	NA	183905306	184023526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_183906957_184001324_184001478_184009157_184011424_184017088
transcript_157552.known	chr4	-	2257	9	FSM	ENSG00000168310.11	ENST00000393593.8	2257	9	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_8	4.97336656601944	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAAGGGGCATCACTCC	-184473620	True	NA	-15	True	AATAAA	-22	NA	184474550	184387728	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_184389067_184390702_184390750_184398914_184399080_184408157_184408276_184418166_184418214_184418531_184418709_184419468_184419569_184428977_184429071_184474378
transcript_157561.known	chr4	-	2645	8	FSM	ENSG00000164305.19	ENST00000308394.9	2645	8	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_7	388.439263237497	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATGTCTTTGAGTTTTTT	-184636978	True	NA	-2	True	AATATA	-19	NA	184649447	184627695	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_184629502_184631036_184631158_184631764_184631941_184632267_184632397_184635293_184635419_184638400_184638469_184648464_184648632_184649394
transcript_157563.known	chr4	-	2540	7	FSM	ENSG00000164305.19	ENST00000523916.5	2540	7	0	0	0	0	multi-exon	FALSE	canonical	3	764	junction_6	86.6206608661518	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATGTCTTTGAGTTTTTT	-184637040	True	NA	-2	True	AATATA	-19	NA	184649509	184627695	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_184629502_184631036_184631158_184631764_184631941_184632267_184632397_184635293_184635419_184638400_184638469_184649394
transcript_157564.known	chr4	-	964	7	FSM	ENSG00000164305.19	ENST00000517513.5	964	7	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	445.428913146269	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTTTTTAGTTTGTAT	-184636978	True	NA	NA	False	ACTAAA	-16	NA	184649447	184629255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_184629502_184631764_184631941_184632267_184632397_184635293_184635419_184638400_184638469_184648464_184648632_184649394
transcript_157565.known	chr4	-	677	6	FSM	ENSG00000164305.19	ENST00000393588.8	677	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	351.159564870445	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTGGCAACAGAATTTG	-184636986	True	NA	NA	False	NA	NA	NA	184649455	184629383	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_184629502_184631764_184631941_184632267_184632397_184635293_184635419_184638400_184638469_184649394
transcript_157569.known	chr4	+	2164	14	FSM	ENSG00000164306.11	ENST00000314970.11	2164	14	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_10	12.0600077521637	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGGAGAAATCGCCTTAT	184648329	True	NA	5	True	ATTAAA	-19	NA	184649737	184694952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_184649909_184652022_184652101_184657081_184657321_184659339_184659438_184661773_184661904_184665916_184666065_184672172_184672461_184678231_184678395_184682247_184682337_184685408_184685499_184685575_184685685_184691498_184691582_184691665_184691713_184694521
transcript_157570.known	chr4	-	2494	13	FSM	ENSG00000151725.12	ENST00000281453.10	2494	13	0	0	0	0	multi-exon	FALSE	canonical	3	584	junction_3	67.6282218374022	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGACTGGATTGTATATTA	-184723780	True	NA	-4	True	ATTAAA	-15	NA	184734096	184694084	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_184695402_184697646_184697804_184700819_184700882_184702088_184702137_184702362_184702442_184710071_184710181_184712943_184713014_184716396_184716634_184717135_184717197_184724956_184725063_184728917_184729036_184730919_184730969_184734015
transcript_157576.known	chr4	-	1549	12	FSM	ENSG00000151725.12	ENST00000510146.5	1549	12	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	181.578114238054	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGATGTGAACATAATTTT	-184723814	True	NA	-14	True	AATAAA	-14	NA	184734130	184695001	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_184695402_184697646_184697804_184702088_184702137_184702362_184702442_184710071_184710181_184712943_184713014_184716396_184716634_184717135_184717197_184724956_184725063_184728917_184729036_184730919_184730969_184734015
transcript_157580.nic	chr4	-	949	10	ISM	ENSG00000151725.12	ENST00000510146.5	1549	12	21	7109	-13	-3917	5prime_fragment	FALSE	canonical	3	588	junction_2	65.0111101616058	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTGAAAAGGAAGAATGCTA	-184723793	True	NA	-10	True	AAGAAA	-17	NA	184734109	184702110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_184702137_184702362_184702442_184710071_184710181_184712943_184713014_184716396_184716634_184717135_184717197_184724956_184725063_184728917_184729036_184730919_184730969_184734015
transcript_157584.nic	chr4	-	689	6	ISM	ENSG00000151725.12	ENST00000510146.5	1549	12	-3	21395	-3	0	5prime_fragment	FALSE	canonical	3	641	junction_1	59.0978849029303	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAACGTCTGCCATCCC	-184723817	True	NA	0	True	AATAGA	-11	NA	184734133	184716396	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_184716634_184717135_184717197_184724956_184725063_184728917_184729036_184730919_184730969_184734015
transcript_157585.nic	chr4	-	539	6	ISM	ENSG00000151725.12	ENST00000510146.5	1549	12	-2	21544	-2	-149	5prime_fragment	FALSE	canonical	3	641	junction_1	59.0978849029303	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTACACAACGTCATGAG	-184723816	True	NA	11	True	AAGAAA	-37	NA	184734132	184716545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_184716634_184717135_184717197_184724956_184725063_184728917_184729036_184730919_184730969_184734015
transcript_157586.nic	chr4	-	408	5	ISM	ENSG00000151725.12	ENST00000510146.5	1549	12	40	22135	6	-740	5prime_fragment	FALSE	canonical	3	647	junction_4	50.9754843037317	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGTAGGAGTATTCACT	-184723774	True	NA	18	True	AATGAA	-39	NA	184734090	184717136	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_184717197_184724956_184725063_184728917_184729036_184730919_184730969_184734015
transcript_157587.nic	chr4	-	387	4	ISM	ENSG00000151725.12	ENST00000510146.5	1549	12	-3	29959	-3	-8564	5prime_fragment	FALSE	canonical	3	647	junction_3	53.7463177033243	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTACTGGTGTATTTCA	-184723817	True	NA	NA	False	NA	NA	NA	184734133	184724960	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_184725063_184728917_184729036_184730919_184730969_184734015
transcript_157589.nic	chr4	-	3857	21	NIC	ENSG00000151726.15	novel	3712	21	NA	NA	58	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_20	9.24918915365017	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGAGTGAGGCATCTTTT	NA	False	NA	-9	True	AATAAA	-15	NA	184805730	184755600	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_184757266_184757634_184757707_184757818_184757921_184760356_184760501_184762406_184762524_184763166_184763256_184764852_184764926_184765890_184765987_184766621_184766757_184768315_184768451_184770398_184770477_184773080_184773155_184773662_184773715_184773842_184773876_184776483_184776663_184776883_184776984_184780331_184780434_184783926_184783992_184788616_184788732_184803319_184803547_184805526
transcript_15759.known	chr1	-	5568	4	FSM	ENSG00000132688.11	ENST00000368223.4	5568	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	1.88561808316413	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGACTCTTCTTTCCCC	-156670633	True	NA	-1	True	AATAAA	-20	NA	156677407	156668762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156673206_156673453_156673528_156675215_156675341_156676481
transcript_157590.known	chr4	-	3712	21	FSM	ENSG00000151726.15	ENST00000281455.7	3712	21	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_20	7.73611659684625	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGCATCTTTTTTAATG	-184825565	True	NA	-3	True	AATAAA	-21	NA	184825968	184755594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_184757266_184757634_184757707_184757818_184757921_184760356_184760501_184762406_184762524_184763166_184763256_184764852_184764926_184765890_184765987_184766621_184766757_184768315_184768451_184770398_184770477_184773080_184773155_184773662_184773715_184773842_184773876_184776483_184776663_184776883_184776984_184780331_184780434_184783926_184783992_184788616_184788732_184803319_184803547_184825915
transcript_157592.known	chr4	-	3636	20	FSM	ENSG00000151726.15	ENST00000454703.6	3636	20	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_19	12.4027519062362	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGCATCTTTTTTAATG	NA	False	NA	-3	True	AATAAA	-21	NA	184826119	184755594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_184757266_184757634_184757707_184757818_184757921_184760356_184760501_184762406_184762524_184763166_184763256_184764852_184764926_184765890_184765987_184766621_184766757_184768315_184768451_184770398_184770477_184773080_184773155_184773662_184773715_184773842_184773876_184776483_184776663_184776883_184776984_184780331_184780434_184783926_184783992_184788616_184788732_184825915
transcript_157594.known	chr4	+	846	4	FSM	ENSG00000187821.9	ENST00000505610.5	846	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.942809041582063	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCGCTTTTAGGAGAAAT	NA	False	NA	NA	False	NA	NA	NA	185018840	185020804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_185018956_185019386_185019492_185019746_185019844_185020275
transcript_157595.known	chr4	+	1099	3	FSM	ENSG00000187821.9	ENST00000513599.1	1099	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGCGCTTTTAGGAGAA	NA	False	NA	NA	False	NA	NA	NA	185018840	185020802	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_185018956_185019386_185019844_185020275
transcript_1576.known	chr1	+	1096	6	FSM	ENSG00000157870.17	ENST00000537325.6	1096	6	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_4	154.288042310478	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGTGATGGGCCAGCCT	2586706	False	NA	NA	False	NA	NA	NA	2586795	2589947	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_2586949_2587090_2587296_2587740_2587793_2588389_2588454_2588956_2589041_2589409
transcript_157601.known	chr4	+	1666	4	FSM	ENSG00000151729.11	ENST00000491736.1	1666	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	995.640274173135	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGAAACATCAATAAAGACC	185137392	True	NA	-22	True	NA	NA	NA	185143277	185147241	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_185143484_185144763_185145251_185145354_185145900_185146813
transcript_157604.known	chr4	+	4415	4	FSM	ENSG00000151729.11	ENST00000281456.11	4415	4	0	0	0	0	multi-exon	FALSE	canonical	3	2049	junction_2	53.160135440008	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCGTGTCACAAATTCTTT	185137380	True	NA	NA	False	AATAAA	-14	NA	185143265	185150382	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_185143484_185144763_185145251_185145758_185145900_185146813
transcript_15761.known	chr1	-	783	5	FSM	ENSG00000143320.9	ENST00000368221.1	783	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	428.131040103378	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAGCCCAGAGCAGGGT	-156705596	False	NA	-109	True	NA	NA	NA	156705747	156699755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156700077_156700541_156700659_156700873_156701053_156705376_156705504_156705708
transcript_157614.known	chr4	+	3202	19	FSM	ENSG00000109762.17	ENST00000264694.13	3202	19	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_13	16.1826000139	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAAATGAATCACAGTGC	185209390	False	NA	NA	False	AATAAA	-3	NA	185210129	185363955	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_185210256_185247293_185247379_185258847_185259065_185264437_185264611_185266968_185267156_185288011_185288083_185310634_185310817_185320732_185320865_185323527_185323801_185332594_185332760_185339378_185339511_185341975_185342117_185346536_185346651_185351444_185351610_185353484_185353603_185357670_185357738_185361923_185362106_185362610_185362712_185363384
transcript_157616.nic	chr4	+	3606	18	NIC	ENSG00000109762.17	novel	3745	19	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_13	21.8787157002426	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCACAGTGCTCTATGATA	185209555	False	NA	NA	False	AATAAA	-12	NA	185209569	185363964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_185210256_185247293_185247379_185258847_185259065_185264437_185264611_185266968_185267156_185288011_185288083_185310634_185310817_185320732_185320865_185323527_185323801_185332594_185332760_185339378_185339511_185341975_185342117_185346536_185346651_185353484_185353603_185357670_185357738_185361923_185362106_185362610_185362712_185363384
transcript_157619.known	chr4	-	4851	5	FSM	ENSG00000164323.15	ENST00000458385.7	4851	5	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_4	33.9448081449874	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTTTTGATCCTATGTT	-185198755	True	NA	-27	True	AATAAA	-15	NA	185204000	185159664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_185162926_185164028_185164180_185175785_185176052_185190142_185191213_185203897
transcript_15762.known	chr1	-	1033	5	FSM	ENSG00000143320.9	ENST00000621784.4	1033	5	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_4	417.843496419413	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATAAAACCTGTCTC	-156705665	False	145	29	True	ATTAAA	-8	NA	156705816	156699617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156700077_156700541_156700659_156700873_156701053_156705376_156705547_156705708
transcript_157622.known	chr4	-	903	3	NNC	ENSG00000164323.15	novel	4851	5	NA	NA	35	-233	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	117	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATGATCAAAAAGTGAAAA	-185198720	True	NA	-13	True	NA	NA	NA	185203965	185190375	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_-_185191048_185191049_185191213_185203897
transcript_157624.nic	chr4	-	1227	2	ISM	ENSG00000164323.15	ENST00000458385.7	4851	5	-166	30590	-138	-112	5prime_fragment	FALSE	canonical	3	234	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGCCTGATGTCTCCTC	-185203844	True	NA	NA	False	AAAAAG	-12	NA	185204166	185190254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_185191213_185203897
transcript_157625.nic	chr4	-	1289	2	ISM	ENSG00000164323.15	ENST00000514798.1	2895	4	-195	21337	-195	-220	5prime_fragment	FALSE	canonical	3	79	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTGAAAATTAAAAAGCAAGA	-185204170	False	53	0	True	NA	NA	NA	185204223	185190362	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_185191213_185203784
transcript_157628.known	chr4	-	2361	12	FSM	ENSG00000109775.11	ENST00000264689.11	2361	12	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_3	25.8754167132173	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAACTTAAGTCTTTTT	-185422734	True	NA	NA	False	CATAAA	-34	NA	185425964	185399536	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_185400479_185403493_185403619_185405779_185405857_185407935_185408061_185408270_185408436_185413725_185413873_185415154_185415348_185415709_185415868_185418440_185418508_185418586_185418771_185422484_185422564_185425865
transcript_157629.known	chr4	-	1672	12	FSM	ENSG00000109775.11	ENST00000510755.5	1672	12	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_3	71.206950166863	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTTAATTTTTCACATTA	-185422739	True	NA	-62	True	AATAAA	-5	NA	185425969	185400333	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_185400479_185403493_185403619_185405779_185405960_185407935_185408061_185408270_185408436_185413725_185413873_185415154_185415348_185415709_185415868_185418440_185418508_185418586_185418771_185422484_185422564_185425865
transcript_157632.nic	chr4	-	1526	12	NIC	ENSG00000109775.11	novel	592	6	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	69.9871298676224	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGGTGTTCATTCCATTC	-185422758	True	NA	1	True	AATATA	-23	NA	185425988	185402261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_185402345_185403493_185403619_185405779_185405857_185407935_185408061_185408270_185408436_185413725_185413873_185415154_185415348_185415709_185415868_185418440_185418508_185418586_185418771_185422484_185422564_185425865
transcript_157634.known	chr4	+	784	5	FSM	ENSG00000186352.9	ENST00000335174.6	784	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	5.52268050859363	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTCTCCGTGCAGTATT	185396573	True	NA	NA	False	ATTAAA	-16	NA	185396840	185400241	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_185396951_185397149_185397303_185398936_185399029_185399569_185399774_185400016
transcript_157635.nic	chr4	-	417	4	ISM	ENSG00000109775.11	ENST00000502428.5	565	6	-58	3193	-9	-2666	5prime_fragment	FALSE	canonical	3	237	junction_3	10.4029910228848	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCATGAGAAAGAAGGACAA	-185422758	True	NA	NA	False	ATTAAA	-39	NA	185425988	185418476	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_185418508_185418586_185418771_185422484_185422564_185425865
transcript_157636.nic	chr4	-	386	3	ISM	ENSG00000109775.11	ENST00000502428.5	565	6	-58	3303	-9	-2776	5prime_fragment	FALSE	canonical	3	237	junction_2	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTATGTTTGAAGATTT	-185422758	True	NA	NA	False	NA	NA	NA	185425988	185418586	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_-_185418771_185422484_185422564_185425865
transcript_157638.known	chr4	-	2658	7	FSM	ENSG00000154553.16	ENST00000284771.7	2658	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	9.54666899441312	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATGTATCCAAAATACAT	-185534574	True	NA	NA	False	AATAAA	-24	NA	185535507	185500659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_185502484_185504474_185504587_185506521_185506653_185514702_185514891_185523361_185523447_185525019_185525172_185535341
transcript_157640.known	chr4	-	788	5	FSM	ENSG00000168491.10	ENST00000510481.5	788	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	1.6393596310755	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTGGCACTTACAAATGAA	-185471709	True	NA	NA	False	AATGAA	-30	NA	185471752	185459811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_185460239_185461048_185461160_185462642_185462709_185470944_185471050_185471673
transcript_157644.known	chr4	-	2819	5	FSM	ENSG00000154553.16	ENST00000504011.5	2819	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	15.9902313929474	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTATAAGAGTGCCCCCA	-185534558	True	NA	NA	False	NA	NA	NA	185535491	185512093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_185514338_185514702_185514891_185523361_185523447_185525019_185525172_185535341
transcript_157646.known	chr4	-	622	3	FSM	ENSG00000154553.16	ENST00000515261.1	622	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	11.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCATCAGAAAGAATTTGG	-185534574	True	NA	NA	False	AAAAAG	-43	NA	185535507	185523142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_185523447_185525019_185525172_185535341
transcript_157647.known	chr4	+	394	2	FSM	ENSG00000249679.3	ENST00000512874.2	530	2	101	35	21	-35	multi-exon	FALSE	canonical	3	30	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGGAAGCGACGGTGG	185471282	True	NA	7	True	ATTAAA	-15	NA	185471515	185472263	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_185471761_185472114
transcript_157648.known	chr4	+	1333	8	FSM	ENSG00000205129.9	ENST00000378850.5	1333	8	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	10.8364464391502	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGGTTGTTGATTTATG	185425860	True	NA	6	True	AATAAA	-17	NA	185426253	185449826	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_185426397_185429333_185429512_185431981_185432202_185436045_185436184_185436283_185436360_185440539_185440720_185444963_185445131_185449595
transcript_15765.known	chr1	-	974	4	FSM	ENSG00000143320.9	ENST00000368222.8	974	4	0	0	0	0	multi-exon	FALSE	canonical	3	899	junction_3	69.1712849863776	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCTCTGGCTCATTGGG	-156689177	True	NA	-34	True	AATAAA	-2	NA	156705583	156699605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156700077_156700541_156700659_156700873_156701053_156705376
transcript_157653.nic	chr4	-	2687	21	NIC	ENSG00000154556.18	novel	4622	24	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	14.6273716025812	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTCCAGGAGGCTGTCC	NA	False	NA	NA	False	TTTAAA	-38	NA	185775529	185587304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_185587689_185589678_185589786_185593885_185593936_185611779_185611981_185614830_185614960_185615044_185615160_185618584_185618632_185620062_185620152_185626831_185627020_185630548_185630599_185646667_185646783_185649466_185649657_185651783_185651829_185652661_185652729_185657423_185657597_185662103_185662243_185678422_185678548_185678795_185678823_185684753_185684847_185690561_185690612_185775226
transcript_157660.nic	chr4	-	2002	12	NIC	ENSG00000154556.18	novel	1790	12	NA	NA	-7	181	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	14.0353744352329	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGATTTGCAGGCACCA	NA	False	NA	NA	False	AAGAAA	-20	NA	185775529	185645396	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_185646072_185646667_185646783_185649466_185649657_185651783_185651829_185652661_185652729_185657423_185657597_185662103_185662243_185678422_185678548_185678795_185678823_185684753_185684847_185690561_185690612_185775226
transcript_157666.known	chr4	-	780	6	FSM	ENSG00000154556.18	ENST00000492810.5	780	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	24.6040647048409	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTCCTCAGGATTTTCTT	-185656698	True	NA	NA	False	NA	NA	NA	185656743	185645837	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_185646072_185646667_185646783_185649466_185649657_185651783_185651829_185652661_185652729_185656614
transcript_157667.known	chr4	-	571	5	FSM	ENSG00000154556.18	ENST00000476311.5	571	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	21.7370651192842	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATATGCAAACAAAAATATC	-185656679	True	NA	NA	False	NA	NA	NA	185656724	185645982	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_185646072_185646667_185646783_185649466_185649657_185652661_185652729_185656614
transcript_157668.known	chr4	-	1031	5	FSM	ENSG00000154556.18	ENST00000466289.5	1031	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	23.951774464536	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATATTGGCTTTTTAATAT	-185656689	True	NA	NA	False	AATATA	-32	NA	185656734	185646173	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_185646783_185649466_185649657_185651783_185651829_185652661_185652729_185656614
transcript_157673.known	chr4	+	2997	14	FSM	ENSG00000109794.14	ENST00000356371.9	2997	14	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	11.1594150554005	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCAGGTGATGTCATCTT	186104815	False	NA	NA	False	ATTAAA	-5	NA	186105076	186172662	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_186105643_186149172_186149284_186149565_186149705_186151902_186152046_186153644_186153771_186154467_186154639_186155999_186156191_186157564_186157720_186162844_186162949_186163423_186163634_186165343_186165465_186166967_186167097_186167180_186167263_186171913
transcript_157675.nic	chr4	+	2906	14	NIC	ENSG00000109794.14	novel	6015	14	NA	NA	-83	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_2	12.7548575269403	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTTGCACTGTAAAGAGA	NA	False	NA	5	True	AATAAA	-16	NA	186104620	186172142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_186105643_186149172_186149284_186149592_186149705_186151902_186152046_186153644_186153771_186154467_186154639_186155999_186156191_186157564_186157720_186162844_186162949_186163423_186163634_186165343_186165465_186166967_186167097_186167180_186167263_186171913
transcript_157679.known	chr4	+	2708	14	FSM	ENSG00000109794.14	ENST00000227065.8	2708	14	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	12.4010879461651	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGATGTCATCTTTATTG	186144683	True	NA	NA	False	ATTAAA	-10	NA	186144840	186172667	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_186145113_186149172_186149284_186149565_186149705_186151902_186152046_186153644_186153771_186154467_186154639_186155999_186156191_186157564_186157720_186162844_186162949_186163423_186163634_186165343_186165465_186166967_186167097_186167180_186167263_186171913
transcript_157680.known	chr4	+	2070	14	FSM	ENSG00000109794.14	ENST00000514153.5	2070	14	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	13.8097812861608	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTTGCACTGTAAAGAGA	186144769	True	NA	5	True	AATAAA	-16	NA	186144926	186172142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_186145113_186149172_186149284_186149592_186149705_186151902_186152046_186153644_186153771_186154467_186154639_186155999_186156191_186157564_186157720_186162844_186162949_186163423_186163634_186165343_186165465_186166967_186167097_186167180_186167263_186171913
transcript_157696.known	chr4	+	1791	9	FSM	ENSG00000109794.14	ENST00000514829.5	1791	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	26.0381330935995	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCAGGGAGTTCTGGGC	186144466	True	NA	NA	False	NA	NA	NA	186144482	186158410	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_186144716_186149172_186149284_186149565_186149705_186151902_186152046_186153644_186153771_186154467_186154639_186155999_186156191_186157564_186157720_186157888
transcript_15770.nic	chr1	+	1809	8	NIC	ENSG00000143303.12	novel	2271	8	NA	NA	10	0	intron_retention	FALSE	canonical	3	16	junction_6	17.9022287975092	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTCCCATTTCTGTAG	156727263	True	NA	25	True	ATTAAA	-14	NA	156728478	156736949	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_156729216_156731990_156732116_156732280_156732474_156732984_156733048_156733376_156733521_156734008_156734053_156735724_156735910_156736631
transcript_157700.nic	chr4	+	2346	9	NIC	ENSG00000109794.14	novel	2708	14	NA	NA	-3	513	intron_retention	FALSE	canonical	3	10	junction_8	20.9269563004274	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATATTCGGGTCTGTTTGC	186144680	True	NA	12	True	AATAAA	-23	NA	186144837	186158923	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_186145113_186149172_186149284_186149565_186149705_186151902_186152046_186153644_186153771_186154467_186154639_186155999_186156191_186157564_186157720_186157888
transcript_157703.nic	chr4	+	2319	9	NIC	ENSG00000109794.14	novel	2070	14	NA	NA	-3	513	intron_retention	FALSE	canonical	3	10	junction_8	22.0195225879218	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATATTCGGGTCTGTTTGC	186144680	True	NA	12	True	AATAAA	-23	NA	186144837	186158923	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_186145113_186149172_186149284_186149592_186149705_186151902_186152046_186153644_186153771_186154467_186154639_186155999_186156191_186157564_186157720_186157888
transcript_157715.nnic	chr4	+	1455	9	NNC	ENSG00000164344.16	novel	720	4	NA	NA	-528	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	20.8172854858649	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATTAGCAAGTGTTTTCTT	186250041	True	NA	14	True	AATAAA	-15	NA	186250503	186258471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr4_+_186250541_186251218_186251329_186251486_186251650_186251748_186251862_186252016_186252186_186254587_186254764_186255991_186256088_186257225_186257366_186258020
transcript_15772.known	chr1	+	2271	8	FSM	ENSG00000143303.12	ENST00000368216.9	2271	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	16.3482508581942	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTGTAGGTAGATAAAAG	156727253	True	NA	36	True	ATTAAA	-25	NA	156728468	156736960	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156729216_156731990_156732116_156732280_156732474_156732984_156733048_156733376_156733521_156734008_156734494_156735724_156735910_156736631
transcript_157722.nnic	chr4	-	589	2	Antisense	novelGene_ENSG00000164344.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	422	junction_1	0	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTAGTGGTCTCTTC	-186247266	False	NA	-1	True	ATTAAA	-22	NA	186247323	186241993	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr4_-_186242330_186247070
transcript_157724.nnic	chr4	-	368	2	Antisense	novelGene_ENSG00000164344.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	129	junction_1	0	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAAGCCTGTTTAGTGGT	-186236962	True	NA	-7	True	ATTAAA	-16	NA	186247322	186241999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr4_-_186242330_186247284
transcript_157726.known	chr4	-	1289	2	FSM	ENSG00000168412.6	ENST00000307161.5	1289	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCAAGGCCTCGCTCTTGA	-186555488	True	NA	NA	False	AAAAAG	-30	NA	186555567	186533654	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_186534558_186555181
transcript_157728.known	chr4	-	14776	27	FSM	ENSG00000083857.15	ENST00000441802.7	14776	27	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_26	78.8156038375906	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGCTTTATGCCTCTTT	-186720235	True	NA	-11	True	AATAAA	-15	NA	186723856	186587793	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_186589221_186595688_186595827_186596539_186597172_186597681_186597793_186597971_186598126_186599897_186600361_186601268_186601427_186602902_186603035_186603175_186603978_186604376_186604575_186606069_186606214_186609182_186609321_186609800_186610016_186611385_186611776_186613108_186613343_186614190_186614345_186617004_186617202_186617707_186621776_186628153_186628365_186628487_186628764_186633683_186633824_186636024_186636236_186636584_186636915_186639721_186639784_186663298_186663614_186706562_186709846_186723663
transcript_157736.known	chr4	+	2647	4	FSM	ENSG00000179059.10	ENST00000326866.5	2647	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	218.024973085399	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATATGCCAAGTCTGTAT	187972420	True	NA	44	True	ATTAAA	-16	NA	187995770	188005046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_187995841_187999107_187999274_187999608_187999686_188002712
transcript_157749.known	chr4	+	2480	3	FSM	ENSG00000179059.10	ENST00000509524.5	2480	3	0	0	0	0	multi-exon	FALSE	canonical	3	526	junction_2	55.5	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATATGCCAAGTCTGTA	187972420	True	NA	43	True	ATTAAA	-15	NA	187995770	188005045	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_187995841_187999608_187999686_188002712
transcript_157754.nnic	chr4	+	2476	2	NIC	ENSG00000179059.10	novel	2647	4	NA	NA	-68	4	combination_of_known_splicesites	FALSE	canonical	3	42	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCCAAGTCTGTATTTTA	187972352	True	NA	48	True	ATTAAA	-20	NA	187995702	188005050	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_+_187995841_188002712
transcript_157755.known	chr4	+	2338	1	FSM	ENSG00000179059.10	ENST00000618147.1	2338	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATATGCCAAGTCTGTA	188002674	False	NA	43	True	ATTAAA	-15	NA	188002707	188005045	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_188002700_188005000
transcript_15776.nic	chr1	+	2336	8	NIC	ENSG00000143303.12	novel	2271	8	NA	NA	10	0	intron_retention	FALSE	canonical	2	4	junction_2	21.4037952003749	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTCCCATTTCTGTAG	156727263	True	NA	25	True	ATTAAA	-14	NA	156728478	156736949	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_156729216_156731990_156732287_156732365_156732474_156732984_156733048_156733376_156733521_156734008_156734494_156735724_156735910_156736631
transcript_157768.nic	chr4	-	2053	8	NIC	ENSG00000179046.9	novel	1998	8	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_7	52.1993822779933	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAGCCTGATTTAATAT	-188109627	True	NA	-25	True	AATAAA	-14	NA	188109661	188091271	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr4_-_188091942_188097060_188097162_188097323_188097347_188099034_188099176_188101055_188101251_188104836_188104933_188105179_188105588_188109242
transcript_157769.known	chr4	-	1998	8	FSM	ENSG00000179046.9	ENST00000682553.1	1998	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_7	56.9933759129882	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAGCCTGATTTAATAT	-188107637	True	NA	-25	True	AATAAA	-14	NA	188109603	188091271	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_-_188091942_188097060_188097162_188097323_188097347_188099034_188099176_188101055_188101251_188104836_188104933_188105179_188105591_188109242
transcript_157783.known	chr4	+	978	9	FSM	ENSG00000109536.12	ENST00000226798.9	978	9	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_8	24.3964649078509	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTTACAGAGTTCTTGA	NA	False	NA	42	True	AATAAA	-15	NA	189940871	189963192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr4_+_189941072_189943201_189943273_189952161_189952288_189953067_189953126_189955036_189955152_189957397_189957503_189960747_189960840_189961821_189961933_189963092
transcript_157784.nic	chr4	+	765	7	ISM	ENSG00000109536.12	ENST00000226798.9	978	9	-54	2409	-52	-393	5prime_fragment	FALSE	canonical	3	316	junction_1	23.6484671807709	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGACATTCCAGAAGAAGA	NA	False	NA	NA	False	AAGAAA	-4	NA	189940817	189960783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr4_+_189941072_189943201_189943273_189952161_189952288_189953067_189953126_189955036_189955152_189957397_189957503_189960747
transcript_15780.known	chr1	+	1802	7	FSM	ENSG00000143303.12	ENST00000368218.8	1802	7	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_5	19.310331143947	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTCCCATTTCTGTAG	NA	False	NA	25	True	ATTAAA	-14	NA	156728441	156736949	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156729216_156731990_156732116_156732280_156732474_156732984_156733048_156733376_156733521_156735724_156735910_156736631
transcript_157813.nic	chr5	+	3348	13	ISM	ENSG00000153404.15	ENST00000637938.2	12591	20	-49	26659	-49	6197	5prime_fragment	FALSE	canonical	3	37	junction_11	82.032344569417	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGATAAAGAAAACGCAAAGT	86747	True	NA	NA	False	AAGAAA	-2	NA	92118	163307	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_92277_113250_113449_139482_140717_143046_143257_143379_143504_144826_144921_151512_151600_154874_154992_155344_155444_156070_156211_156772_156912_161782_161945_162721
transcript_15783.nic	chr1	+	2415	7	NIC	ENSG00000143303.12	novel	2271	8	NA	NA	10	0	intron_retention	FALSE	canonical	3	24	junction_1	16.8663043439345	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTCCCATTTCTGTAG	156727263	True	NA	25	True	ATTAAA	-14	NA	156728478	156736949	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_156729216_156731990_156732474_156732984_156733048_156733376_156733521_156734008_156734494_156735724_156735910_156736631
transcript_157853.nnic	chr5	+	2791	11	NNC	ENSG00000153404.15	novel	1360	9	NA	NA	-38552	0	at_least_one_novel_splicesite	TRUE	canonical	3	20	junction_1	74.3521351408283	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGTGGAGAAAAAAAATTT	53599	False	NA	18	True	AATAAA	-29	NA	53615	157110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_53766_113250_113449_139482_140717_143046_143257_143379_143504_144826_144921_151512_151600_154874_154992_155344_155444_156070_156211_156772
transcript_157866.nic	chr5	+	2917	11	ISM	ENSG00000153404.15	ENST00000637938.2	12591	20	-167	32856	-167	0	5prime_fragment	FALSE	canonical	3	192	junction_1	33.9493740737587	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGTGGAGAAAAAAAATTT	91970	False	NA	18	True	AATAAA	-29	NA	92000	157110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_92277_113250_113449_139482_140717_143046_143257_143379_143504_144826_144921_151512_151600_154874_154992_155344_155444_156070_156211_156772
transcript_157870.nnic	chr5	+	2794	11	NNC	ENSG00000153404.15	novel	12591	20	NA	NA	-167	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	74.8618060161522	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGTGGAGAAAAAAAATTT	91970	False	NA	18	True	AATAAA	-29	NA	92000	157110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_92277_113250_113449_139605_140717_143046_143257_143379_143504_144826_144921_151512_151600_154874_154992_155344_155444_156070_156211_156772
transcript_157886.nnic	chr5	+	2540	10	NNC	ENSG00000153404.15	novel	1360	9	NA	NA	-13240	0	at_least_one_novel_splicesite	TRUE	canonical	3	6	junction_1	81.9769615332395	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGTGGAGAAAAAAAATTT	126899	True	NA	18	True	AATAAA	-29	NA	127017	157110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_127115_139482_140717_143046_143257_143379_143504_144826_144921_151512_151600_154874_154992_155344_155444_156070_156211_156772
transcript_157910.known	chr5	+	1360	9	FSM	ENSG00000153404.15	ENST00000502646.1	1360	9	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_1	27.459060435492	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGTGGAGAAAAAAAATTT	140552	False	NA	18	True	AATAAA	-29	NA	140565	157110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140717_143046_143257_143379_143504_144826_144921_151512_151600_154874_154992_155344_155444_156070_156211_156772
transcript_157911.known	chr5	-	9283	3	FSM	ENSG00000164366.4	ENST00000296824.4	9283	3	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_1	2.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTCTTACTTCTTTT	-216444	True	NA	NA	False	NA	NA	NA	218153	196867	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_205959_216728_216860_218092
transcript_157914.nnic	chr5	+	793	3	NIC	ENSG00000249915.9	novel	1110	6	NA	NA	0	2	intron_retention	TRUE	canonical	3	23	junction_2	474	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTCTGCCTTCAGCTTT	262928	True	NA	15	True	AATAAA	-15	NA	271645	314971	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_271822_272710_272773_314416
transcript_157920.known	chr5	+	2693	15	FSM	ENSG00000073578.18	ENST00000264932.11	2693	15	0	0	0	0	multi-exon	FALSE	canonical	3	748	junction_11	54.0355136432872	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCCTGGCCTTGTAGTT	200401	True	NA	NA	False	NA	NA	NA	218319	257082	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_218419_223481_223569_224359_224522_225418_225563_225882_226048_228184_228334_230875_231001_233476_233646_235143_235340_236427_236600_240357_240477_250991_251104_251337_251469_254392_254507_256333
transcript_157926.known	chr5	+	2067	13	FSM	ENSG00000073578.18	ENST00000504309.5	2067	13	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_11	228.47980399443	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTTTATTTCCAAATC	200384	True	NA	NA	False	AATAAA	-16	NA	218302	256682	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_218419_223481_223569_224359_224522_225418_225563_225882_226048_228184_228334_230875_231001_233476_233646_235143_235340_236427_236600_240357_240477_254392_254507_256333
transcript_157934.known	chr5	+	3665	24	FSM	ENSG00000286001.1	ENST00000651543.1	3665	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	400.811313319233	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGAATGTTAGACGTGTG	200379	True	NA	-1	True	AAAAAG	-41	NA	218297	314955	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_218419_223481_223569_224359_224522_225418_225563_225882_226048_228184_228334_230875_231001_233476_233646_236427_236600_240357_240477_250991_251104_251337_251469_254392_254507_256333_256456_263700_263815_264322_264386_270734_270855_271410_271822_272710_272773_304176_304222_306601_306761_311292_311403_313700_313851_314416
transcript_157936.known	chr5	+	1088	6	FSM	ENSG00000249915.9	ENST00000507528.5	1088	6	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_4	313.918205907208	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGGTCTGCCTTCAGCT	262939	True	NA	13	True	AATAAA	-13	NA	271656	314969	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_271822_272710_272773_304176_304222_306601_306755_311292_311403_314416
transcript_157942.known	chr5	+	1073	5	NIC	ENSG00000249915.9	novel	1050	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	31	junction_1	333.022803273289	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGCCTTCAGCTTTTCA	262903	True	NA	18	True	AATAAA	-18	NA	271620	314974	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_271822_304176_304222_306601_306761_311292_311403_314416
transcript_157944.known	chr5	+	672	4	FSM	ENSG00000249915.9	ENST00000505221.5	672	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	414.753742197303	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGTCTCTGGTTCTATA	262929	True	NA	6	True	NA	NA	NA	271646	314806	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_271822_272710_272773_304176_304222_314416
transcript_157945.known	chr5	+	931	4	FSM	ENSG00000249915.9	ENST00000618970.4	931	4	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_2	407.840110282885	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGCCTTCAGCTTTTCA	262903	True	NA	18	True	AATAAA	-18	NA	271620	314974	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_271822_272710_272773_311292_311403_314416
transcript_157949.known	chr5	+	1156	3	FSM	ENSG00000249915.9	ENST00000509581.5	1156	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	455.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTTTGATCCCTTTT	262939	True	NA	13	True	AATAAA	-14	NA	271656	276940	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_271822_272710_272773_276011
transcript_157951.known	chr5	+	855	2	FSM	ENSG00000249915.9	ENST00000515587.1	855	2	0	0	0	0	multi-exon	FALSE	canonical	3	971	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTCCCTGGAATTACGT	262906	True	NA	NA	False	NA	NA	NA	271623	273367	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_271822_272710
transcript_157952.known	chr5	+	679	3	FSM	ENSG00000073578.18	ENST00000502379.5	679	3	0	0	0	0	multi-exon	FALSE	canonical	3	876	junction_1	19.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTTAGGTTGGGGAAGA	200392	True	NA	NA	False	AAGAAA	-27	NA	218310	224843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_218419_223481_223569_224359
transcript_157953.known	chr5	+	5661	11	FSM	ENSG00000063438.20	ENST00000684583.1	5661	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	3.20156211871642	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAATGTTTGCGGAAGTC	321569	True	NA	NA	False	AATACA	-29	NA	321713	438285	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_321820_343892_343965_353729_353912_376609_376717_413343_413434_422728_422859_423840_423978_427806_428007_432462_432525_432805_432948_433852
transcript_157957.known	chr5	+	2801	13	FSM	ENSG00000180104.16	ENST00000512944.6	2801	13	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	35.9753001686188	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACGCCATGCATTCTC	441249	True	NA	11	True	ATTAAA	-24	NA	443175	467290	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_443291_446149_446350_447532_447753_453369_454052_456888_457007_457899_458026_459358_459460_461959_462071_462156_462308_464289_464413_465110_465273_465717_465846_466726
transcript_15796.known	chr1	-	2985	4	FSM	ENSG00000143319.17	ENST00000368219.2	2985	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	97.4896005849969	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATTATGTACAGTTTCTT	NA	False	NA	-5	True	GATAAA	-17	NA	156728766	156721894	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156723463_156724147_156724349_156726905_156727770_156728414
transcript_157978.known	chr5	-	1876	2	FSM	ENSG00000188242.4	ENST00000342584.3	1876	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGTGCAAACTTTGTT	-472385	True	NA	0	True	ATTAAA	-15	NA	473098	470509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_471966_472678
transcript_157980.known	chr5	+	2762	1	FSM	ENSG00000225138.8	ENST00000534918.1	2762	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACAAACTCTTTTTTTTA	478095	False	NA	8	True	AATAAA	-22	NA	478122	480884	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_478100_480900
transcript_157981.known	chr5	+	613	3	FSM	ENSG00000180104.16	ENST00000510441.1	613	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	57	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCATCATTGTTCTGTTC	441248	True	NA	NA	False	NA	NA	NA	443174	447314	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_443291_446149_446350_447017
transcript_157984.known	chr5	+	2366	12	FSM	ENSG00000112877.8	ENST00000264935.6	2366	12	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_9	18.0929647073338	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAACTTTTTCAGTGGCTG	609830	True	NA	8	True	AATAAA	-21	NA	612339	653553	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_612444_618989_619118_620068_620262_624470_624580_633768_633948_635371_635585_637516_637819_639088_639225_640407_640605_644298_644426_647804_647917_652987
transcript_157988.nnic	chr5	+	2520	12	NNC	ENSG00000112877.8	novel	2366	12	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	50.054515734892	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAACTTTTTCAGTGGCTG	609834	True	NA	8	True	AATAAA	-21	NA	612343	653553	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_612602_618989_619118_620068_620262_624470_624580_633768_633948_635371_635585_637516_637819_639088_639225_640407_640605_644298_644426_647804_647917_652987
transcript_15799.nic	chr1	-	3006	4	NIC	ENSG00000143319.17	novel	2985	4	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	2	20	junction_3	110.200826776491	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATTATGTACAGTTTCTT	-156728633	False	NA	-5	True	GATAAA	-17	NA	156728748	156721894	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_156723463_156724147_156724349_156726905_156727809_156728414
transcript_157993.known	chr5	-	5979	4	FSM	ENSG00000171368.12	ENST00000360578.7	5979	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	2.44948974278318	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCTGTTCCTCAGAGCA	-693165	True	NA	0	True	AATAAA	-17	NA	693352	659861	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_665297_665969_666124_677749_678065_693277
transcript_157996.known	chr5	-	2665	16	FSM	ENSG00000028310.18	ENST00000467963.6	2665	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	56.2267631016484	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTACTGAGTGCCCATTT	-887714	True	NA	-34	True	CATAAA	-17	NA	892801	863740	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_864569_865413_865582_870472_870576_871525_871565_876100_876213_878354_878488_879793_879890_881106_881183_883937_884071_886591_886708_887360_887472_889020_889166_889586_889648_891154_891288_891639_891855_892605
transcript_157998.nic	chr5	-	2759	16	NIC	ENSG00000028310.18	novel	2843	16	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	66.9676538835479	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTACTGAGTGCCCATTT	NA	False	NA	-34	True	CATAAA	-17	NA	892835	863740	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_864569_865413_865582_870472_870576_871525_871565_876100_876213_878354_878488_879793_879890_881106_881183_883937_884071_886591_886768_887360_887472_889020_889166_889586_889648_891154_891288_891639_891855_892605
transcript_157999.known	chr5	-	2843	16	FSM	ENSG00000028310.18	ENST00000495265.5	2843	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	66.9676538835479	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTACTGAGTGCCCATTT	-887713	True	NA	-34	True	CATAAA	-17	NA	892800	863740	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_864569_865413_865582_870472_870576_871525_871565_876100_876213_878354_878488_879793_879890_881106_881183_883937_884071_886591_886768_887360_887472_889020_889166_889586_889767_891154_891288_891639_891855_892605
transcript_158007.nic	chr5	-	381	2	ISM	ENSG00000028310.18	ENST00000467963.6	2665	16	-34	27963	-34	-2661	5prime_fragment	FALSE	canonical	3	147	junction_1	0	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAAGAAGAAGTCCG	NA	False	NA	-46	True	AAGAAA	-8	NA	892835	891703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_891855_892605
transcript_158010.known	chr5	+	2431	13	FSM	ENSG00000071539.14	ENST00000166345.8	2431	13	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_7	35.4185293627816	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAAGCCTGATTTATGGT	885323	True	NA	81	True	ACTAAA	-23	NA	892883	918120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_893091_894786_894953_896664_896795_900493_900550_901340_901432_904147_904221_907129_907194_907987_908075_908354_908462_911842_911997_914464_914578_915903_915974_917007
transcript_158011.known	chr5	+	1452	9	FSM	ENSG00000071539.14	ENST00000512024.5	1452	9	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_7	42.5395036995027	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTGACAGAGCAAGACTCC	885323	True	NA	NA	False	NA	NA	NA	892883	908932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_893091_894786_894953_896664_896795_900493_900550_901340_901432_904147_904221_907129_907194_907987_908075_908354
transcript_158014.known	chr5	+	1940	11	FSM	ENSG00000145506.14	ENST00000274150.4	1940	11	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_9	7.37631344236401	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCCCTGGAGTGCGCAA	NA	False	NA	17	True	CATAAA	-20	NA	1008961	1038682	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_1009083_1009178_1009215_1009480_1009561_1032151_1032213_1033371_1033500_1034234_1034331_1034755_1034904_1035388_1035474_1036256_1036385_1037519_1037699_1037804
transcript_158017.known	chr5	+	2182	10	FSM	ENSG00000145506.14	ENST00000296849.10	2182	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_9	4.0307460327149	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGTAGGGAGTGCAGACC	NA	False	NA	NA	False	NA	NA	NA	1008801	1038943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_1009083_1009178_1009215_1009480_1009561_1032151_1032213_1033371_1033500_1034234_1034331_1034755_1034904_1035388_1035474_1036256_1036385_1037804
transcript_158024.known	chr5	-	5300	24	FSM	ENSG00000113504.21	ENST00000264930.10	5300	24	0	0	0	0	multi-exon	TRUE	non_canonical	3	65	junction_21	13.9832467948712	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACGTTGAAGAATCTCTTG	NA	False	NA	-11	True	AATAAA	-17	NA	1112063	1050383	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_1052452_1053348_1053483_1057470_1057650_1060343_1060452_1063843_1063976_1064082_1064253_1065282_1065479_1073632_1073802_1074566_1074672_1075370_1075491_1076137_1076237_1076693_1076813_1077832_1078008_1078700_1078759_1079397_1079497_1081576_1081745_1083744_1083957_1085231_1085474_1086902_1087034_1088305_1088361_1088981_1089129_1093532_1093656_1094153_1094249_1111867
transcript_158030.nic	chr5	-	1225	3	ISM	ENSG00000113504.21	ENST00000264930.10	5300	24	-7	42345	-7	-14210	5prime_fragment	FALSE	canonical	3	85	junction_1	2	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATCCACCGGAAGAAACCA	NA	False	NA	NA	False	AAAACA	-9	NA	1112070	1092728	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_1093656_1094153_1094249_1111867
transcript_158034.known	chr5	-	4039	16	FSM	ENSG00000164362.21	ENST00000310581.10	4039	16	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_15	18.9483508517232	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATGTTTGAATCCTAAT	-1293650	True	NA	-17	True	AGTAAA	-37	NA	1295068	1253166	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_1253832_1254367_1254506_1255286_1255412_1258597_1258660_1260473_1260601_1264403_1264593_1266463_1266536_1268519_1268634_1271118_1271205_1272184_1272281_1278640_1278797_1279290_1279471_1280157_1280339_1282428_1282625_1293312_1294667_1294770
transcript_158040.nnic	chr5	-	2702	15	NIC	ENSG00000164362.21	novel	4039	16	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_14	28.067338851485	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATGTTTGAATCCTAAT	-1293667	True	NA	-17	True	AGTAAA	-37	NA	1295085	1253166	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_1253832_1254367_1254506_1255286_1255412_1258597_1258660_1260473_1260601_1264403_1264593_1266463_1266536_1268519_1268634_1271118_1271205_1272184_1272281_1278640_1278797_1279290_1279471_1280157_1280339_1282428_1282625_1294770
transcript_158049.nnic	chr5	-	2520	13	NIC	ENSG00000164362.21	novel	4039	16	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_12	32.5374783903117	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATGTTTGAATCCTAAT	-1293667	True	NA	-17	True	AGTAAA	-37	NA	1295085	1253166	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_1253832_1254367_1254506_1255286_1255412_1258597_1258660_1260473_1260601_1264403_1264593_1266463_1266536_1268519_1268634_1278640_1278797_1279290_1279471_1280157_1280339_1282428_1282625_1294770
transcript_158067.known	chr5	-	2492	17	FSM	ENSG00000049656.14	ENST00000320895.10	2492	17	0	0	0	0	multi-exon	FALSE	canonical	3	1030	junction_10	83.1026990762033	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCAAGCCTTTGAGTCA	NA	False	NA	-15	True	ATTAAA	-20	NA	1345099	1317751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_1318454_1320615_1320732_1321634_1321680_1321763_1321820_1322876_1322912_1323786_1323870_1324762_1324814_1325750_1325817_1330279_1330384_1331798_1331884_1334288_1334384_1335056_1335175_1337903_1337983_1338859_1339006_1341670_1341861_1344350_1344452_1344679
transcript_158068.known	chr5	+	3302	2	FSM	ENSG00000286388.1	ENST00000656081.1	3302	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTAAGTGTGCAATTCTA	NA	False	NA	8	True	TATAAA	-9	NA	1345196	1350786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_1347453_1349740
transcript_158069.known	chr5	-	3251	1	FSM	ENSG00000279908.1	ENST00000624349.1	3251	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTTTATTTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	1386409	1383158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_1383200_1386400
transcript_158070.known	chr5	-	3942	15	FSM	ENSG00000142319.18	ENST00000270349.12	3942	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	1.60356745147455	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTCAGCCTCCTTGTCT	-1445369	True	NA	NA	False	AATAAA	-21	NA	1445440	1392793	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_1394759_1400914_1400987_1402921_1403090_1406187_1406289_1409025_1409126_1409720_1409850_1411242_1411356_1414690_1414816_1416097_1416202_1420568_1420704_1421875_1422015_1432463_1432699_1441358_1441491_1442911_1443243_1445347
transcript_158084.known	chr5	-	3945	14	FSM	ENSG00000153395.10	ENST00000283415.4	3945	14	0	0	0	0	multi-exon	FALSE	canonical	3	842	junction_3	61.8664337205708	2020	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTTGTTTTGTGTGGTT	-1514031	True	NA	-4	True	AGTAAA	-23	NA	1523960	1461426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_1463836_1466748_1466891_1470825_1470925_1473956_1474111_1474559_1474686_1477403_1477487_1479620_1479676_1480941_1480977_1483427_1483487_1488390_1488452_1489745_1489859_1494699_1494915_1501460_1501604_1523709
transcript_158101.nnic	chr5	-	2310	7	NIC	ENSG00000185986.13	novel	2585	9	NA	NA	0	13	combination_of_known_splicesites	TRUE	canonical	3	21	junction_1	44.8800871458849	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGTCTCTGTGTCTTA	-1591270	True	NA	-2	True	NA	NA	NA	1594501	1567481	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_1568999_1574181_1574296_1576178_1576310_1584983_1585134_1589246_1589366_1593112_1593285_1594394
transcript_158102.nnic	chr5	-	1112	7	NIC	ENSG00000185986.13	novel	1332	8	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	3	27	junction_3	40.7703596037884	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTTTATTTCCAAATC	-1591259	True	NA	NA	False	AATAAA	-16	NA	1594490	1571956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_1572287_1574181_1574296_1576178_1576310_1584983_1585134_1589246_1589366_1593112_1593285_1594394
transcript_158107.known	chr5	-	736	3	FSM	ENSG00000185986.13	ENST00000436493.2	736	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	46.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCCAGTCTCTGCTAGT	-1591389	True	NA	NA	False	NA	NA	NA	1594620	1589027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_1589366_1593112_1593285_1594394
transcript_158123.known	chr5	-	1135	5	FSM	ENSG00000188002.11	ENST00000343123.5	1436	5	0	301	0	-301	multi-exon	FALSE	canonical	2	14	junction_1	46.0563513535321	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGATTGGGCTTCTGTTT	-1632245	True	NA	NA	False	NA	NA	NA	1633984	1629000	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_1629631_1630408_1630567_1632643_1632752_1632844_1632907_1633807
transcript_158124.known	chr5	-	1009	4	FSM	ENSG00000188002.11	ENST00000507505.5	1009	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	50.0199960015992	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACAAAACTCACTCCTC	-1632263	True	NA	NA	False	NA	NA	NA	1634002	1599120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_1599828_1602690_1602736_1632844_1632907_1633807
transcript_158126.known	chr5	-	1130	4	FSM	ENSG00000188002.11	ENST00000522848.5	1130	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	52.6518966631044	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGGTGTGAGCTGAGGCT	-1632208	True	NA	NA	False	AAAAAG	-40	NA	1633947	1601915	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_1602736_1632643_1632752_1632844_1632907_1633807
transcript_158131.nic	chr5	-	1419	4	FSM	ENSG00000188002.11	ENST00000686018.1	1462	4	37	6	0	0	multi-exon	FALSE	canonical	3	38	junction_2	37.249906785864	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAAGGTTTTTTGTTTGT	-1632208	True	NA	-11	True	TTTAAA	-35	NA	1633947	1628521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_1629631_1632643_1632752_1632844_1632907_1633807
transcript_158133.nic	chr5	-	1308	4	FSM	ENSG00000188002.11	ENST00000686018.1	1462	4	-28	182	-3	2	multi-exon	FALSE	canonical	3	38	junction_2	37.249906785864	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTTTGATCCCTTTT	-1632273	True	NA	-20	True	AATAAA	-14	NA	1634012	1628697	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_1629631_1632643_1632752_1632844_1632907_1633807
transcript_158134.known	chr5	-	206	3	ISM	ENSG00000188002.11	ENST00000507505.5	1009	4	96	3570	37	-775	5prime_fragment	FALSE	canonical	3	38	junction_1	45	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTATCGGCAGACGGAC	-1632167	True	NA	NA	False	NA	NA	NA	1633906	1602690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_1602736_1632844_1632907_1633807
transcript_158137.nic	chr5	-	1577	3	FSM	ENSG00000188002.11	ENST00000690916.1	1584	3	-3	10	-3	0	multi-exon	FALSE	canonical	3	70	junction_1	29	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAAGGTTTTTTGTTTGT	-1632273	True	NA	-11	True	TTTAAA	-35	NA	1634012	1628521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_1629631_1632643_1632907_1633807
transcript_158138.nnic	chr5	-	1376	3	FSM	ENSG00000188002.11	ENST00000689007.1	1381	3	-6	11	-3	0	multi-exon	FALSE	canonical	3	40	junction_1	44	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAAGGTTTTTTGTTTGT	-1632273	True	NA	-11	True	TTTAAA	-35	NA	1634012	1628521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_1629631_1632844_1632907_1633807
transcript_15814.nic	chr1	-	2295	4	NIC	ENSG00000143319.17	novel	2985	4	NA	NA	18	-711	combination_of_known_junctions	FALSE	canonical	2	20	junction_3	110.200826776491	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTATTAACCTGGTTGG	-156728633	False	NA	NA	False	NA	NA	NA	156728748	156722605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_156723463_156724147_156724349_156726905_156727809_156728414
transcript_158140.nic	chr5	-	1401	3	FSM	ENSG00000188002.11	ENST00000690916.1	1584	3	-3	186	-3	2	multi-exon	FALSE	canonical	3	70	junction_1	29	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTTTGATCCCTTTT	-1632273	True	NA	-20	True	AATAAA	-14	NA	1634012	1628697	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_1629631_1632643_1632907_1633807
transcript_158142.known	chr5	+	3024	1	FSM	ENSG00000260066.1	ENST00000565428.1	3024	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCAGGTTCCCAACATTC	NA	False	NA	NA	False	AATAAA	-16	NA	1725148	1728172	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_1725100_1728200
transcript_158144.known	chr5	-	609	2	FSM	ENSG00000171421.13	ENST00000505059.7	609	2	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_1	0	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTAGTTCATTCATTCTCT	-1789343	True	NA	-4	True	ATTAAA	-17	NA	1799837	1798384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_1798948_1799791
transcript_158145.known	chr5	-	686	2	FSM	ENSG00000171421.13	ENST00000508987.1	686	2	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_1	0	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTAGTTCATTCATTCT	-1799869	False	NA	-6	True	ATTAAA	-15	NA	1799895	1798386	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_1798948_1799770
transcript_158146.known	chr5	-	793	2	FSM	ENSG00000171421.13	ENST00000510999.1	793	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGCCCCCGTGGCTGTGG	-1799724	False	NA	NA	False	NA	NA	NA	1799750	1798828	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_1798948_1799076
transcript_158147.known	chr5	-	587	2	FSM	ENSG00000171421.13	ENST00000382647.7	587	2	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAGCTTAGTTCATTCAT	-1789344	True	NA	-9	True	ATTAAA	-12	NA	1799838	1798389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_1798948_1799809
transcript_15815.known	chr1	-	3303	3	FSM	ENSG00000143319.17	ENST00000313146.10	3303	3	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_2	6.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTACAGTTTCTTCTTT	-156723522	True	NA	-1	True	GATAAA	-21	NA	156728435	156721890	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156723463_156724147_156724349_156726905
transcript_158154.known	chr5	+	518	4	FSM	ENSG00000145494.12	ENST00000274137.10	518	4	0	0	0	0	multi-exon	FALSE	canonical	3	2892	junction_3	89.2785901919753	1190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTGTAAGTTTGTTTCT	1769120	True	NA	20	True	AATAAA	-22	NA	1801406	1816048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_1801550_1802320_1802375_1814338_1814462_1815850
transcript_158157.known	chr5	+	550	3	FSM	ENSG00000145494.12	ENST00000469176.1	550	3	0	0	0	0	multi-exon	FALSE	canonical	3	2960	junction_2	73	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGCCCAAGCGTCTTTCCT	1769128	True	NA	NA	False	NA	NA	NA	1801414	1814699	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_1801550_1802320_1802375_1814338
transcript_158160.known	chr5	-	2403	7	FSM	ENSG00000113430.10	ENST00000613726.4	2403	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	18.9560896108172	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTATTGCAAAATGAACA	-1886782	True	NA	-2	True	AATAAA	-15	NA	1886984	1877426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_1878793_1879503_1879833_1880065_1880144_1880724_1880835_1881807_1882060_1882602_1882748_1886861
transcript_158161.known	chr5	-	2398	7	FSM	ENSG00000113430.10	ENST00000622814.4	2398	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	22.0863205526759	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTATTGCAAAATGAACA	-1887160	False	NA	-2	True	AATAAA	-15	NA	1887179	1877426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_1878793_1879503_1879833_1880065_1880144_1880724_1880835_1881807_1882060_1882602_1882748_1887061
transcript_158163.nnic	chr5	-	2167	6	NNC	ENSG00000113430.10	novel	2538	6	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	17.7380945989134	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAAAACCGAGTGATGGT	-1886985	False	NA	-23	True	AATATA	-8	NA	1887004	1877447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_1878793_1879503_1879676_1880724_1880835_1881807_1882060_1882602_1882748_1886861
transcript_158167.nic	chr5	-	2888	6	ISM	ENSG00000113430.10	ENST00000613726.4	2403	7	3608	21	-451	0	3prime_fragment	FALSE	canonical	3	8	junction_3	20.6203782700512	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAAAACCGAGTGATGGT	-1883357	False	202	-23	True	AATATA	-8	NA	1883376	1877447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_1878793_1879503_1879833_1880065_1880144_1880724_1880835_1881807_1882060_1882602
transcript_158169.known	chr5	-	2538	6	FSM	ENSG00000113430.10	ENST00000505790.5	2538	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	13.6616250863505	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAAAACCGAGTGATGGT	-1887199	False	NA	-23	True	AATATA	-8	NA	1887218	1877447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_1878793_1879503_1879833_1880724_1880835_1881807_1882060_1882602_1882748_1886861
transcript_158170.known	chr5	-	2391	6	FSM	ENSG00000113430.10	ENST00000513692.5	2391	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	20.3135422809514	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAACACATTTAAAACCAGG	-1887217	False	NA	12	True	AATAAA	-29	NA	1887236	1877412	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_1878793_1879503_1879833_1880724_1880835_1881807_1882060_1882602_1882748_1887061
transcript_158176.nnic	chr5	-	2710	5	NNC	ENSG00000113430.10	novel	2538	6	NA	NA	-20	0	intron_retention	FALSE	canonical	2	9	junction_2	19.7405040462497	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAAAACCGAGTGATGGT	-1886985	False	NA	-23	True	AATATA	-8	NA	1887004	1877447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_1878793_1879503_1879676_1880724_1880835_1881807_1882748_1886861
transcript_158178.known	chr5	-	2394	5	FSM	ENSG00000113430.10	ENST00000231357.7	2394	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	13.5531361684298	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAACACATTTAAAACCAGG	-1882906	False	NA	12	True	AATAAA	-29	NA	1882925	1877412	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_1878793_1879503_1879833_1880724_1880835_1881807_1882060_1882602
transcript_158182.known	chr5	-	1858	5	FSM	ENSG00000113430.10	ENST00000508261.5	1858	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	22.588713996153	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCCCGGCGCTGCCACGC	-1882733	False	NA	NA	False	GGGGCT	-29	NA	1882752	1877813	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_1878793_1879503_1879871_1880724_1880835_1881807_1882060_1882602
transcript_158189.known	chr5	-	2630	5	FSM	ENSG00000170561.13	ENST00000382611.10	2630	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	37.4391172438667	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTTATATTTATTTCT	-2748069	True	NA	-8	True	AATAAA	-17	NA	2751662	2745844	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_2746787_2747540_2747617_2748344_2749053_2749381_2749788_2751164
transcript_158191.known	chr5	+	509	4	FSM	ENSG00000186493.14	ENST00000650439.1	509	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	8.5764535535124	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGCGAGGCCGAGCGC	2751772	True	NA	NA	False	NA	NA	NA	2752227	2755081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_2752465_2752621_2752755_2753284_2753371_2755028
transcript_158192.known	chr5	+	681	3	FSM	ENSG00000186493.14	ENST00000397835.4	681	3	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	3	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTAAGCGACTCCTGATC	2751809	False	NA	7	True	AAGAAA	-26	NA	2752264	2755376	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_2752465_2752621_2752755_2755028
transcript_158193.known	chr5	+	387	2	FSM	ENSG00000186493.14	ENST00000649739.1	387	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGCGAGGCCGAGCGC	2752004	True	NA	NA	False	NA	NA	NA	2752130	2755081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_2752465_2755028
transcript_158194.known	chr5	+	2080	4	FSM	ENSG00000170549.4	ENST00000302006.4	2080	4	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	9.17726659862414	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCCTCCCCGCTCCTGCTG	3594912	True	NA	6	True	AATAAA	-16	NA	3595831	3601403	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_3596382_3599224_3600261_3600608_3600682_3600982
transcript_158196.known	chr5	-	1628	4	FSM	ENSG00000250579.3	ENST00000653379.1	1628	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	53.8949595664257	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTAAAATGTGGAATTA	-5139394	False	NA	-39	True	AATAAA	-4	NA	5139409	5132100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_5133233_5133636_5133771_5133867_5134071_5139250
transcript_158197.known	chr5	-	1633	4	FSM	ENSG00000250579.3	ENST00000512155.3	1684	4	34	17	34	0	multi-exon	TRUE	canonical	3	51	junction_3	29.9777695412228	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTAAAATGTGGAATTA	-5138955	True	NA	-39	True	AATAAA	-4	NA	5140119	5132100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_5133233_5133636_5133771_5133867_5134071_5139955
transcript_158198.known	chr5	+	4979	23	FSM	ENSG00000145536.15	ENST00000274181.7	4979	23	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_19	12.8548797693443	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGAACTACCTCATGAT	5138528	True	NA	30	True	AATAAA	-20	NA	5140329	5320304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_5140540_5140663_5140767_5146129_5146456_5182043_5182306_5186051_5186252_5187724_5187809_5189970_5190131_5191684_5191791_5200131_5200270_5209092_5209247_5222788_5222885_5232367_5232517_5235013_5235187_5236968_5237100_5239150_5239275_5239680_5239926_5242052_5242192_5262656_5262784_5303267_5303470_5303571_5303767_5306503_5306729_5318133_5318282_5319022
transcript_158208.known	chr5	+	2682	11	FSM	ENSG00000145536.15	ENST00000511368.5	2682	11	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_7	3.4	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATACTCCATACTAATAT	5138528	True	NA	NA	False	ATTAAA	-14	NA	5140329	5223727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_5140540_5140663_5140767_5146129_5146456_5182043_5182306_5186051_5186252_5187724_5187809_5189970_5190131_5191684_5191791_5200131_5200270_5209092_5209247_5222788
transcript_158209.nic	chr5	+	1422	3	ISM	ENSG00000145536.15	ENST00000511368.5	2682	11	-396	76885	-396	-76885	5prime_fragment	FALSE	canonical	3	55	junction_2	1.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATTGGCCATGAGGATTA	5139856	True	NA	13	True	AATAAA	-15	NA	5139933	5146842	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_5140540_5140663_5140767_5146129
transcript_158211.known	chr5	+	7930	19	FSM	ENSG00000164151.12	ENST00000296564.9	7930	19	0	0	0	0	multi-exon	FALSE	canonical	2	100	junction_3	55.554916662993	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACTGTTCTGATTATTA	5413070	True	NA	18	True	AATAAA	-21	NA	5422676	5490220	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_5423000_5436417_5436477_5437079_5437115_5439894_5439914_5441111_5441224_5443167_5443245_5444288_5444327_5447426_5447510_5447720_5447761_5447840_5447898_5454551_5454639_5457331_5457742_5460435_5465227_5466333_5466503_5468827_5468989_5473557_5473749_5475972_5476080_5486720_5486820_5489148
transcript_158213.nic	chr5	+	3887	13	ISM	ENSG00000164151.12	ENST00000296564.9	7930	19	-32	27270	-32	8335	5prime_fragment	FALSE	canonical	2	100	junction_3	43.3826642284168	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAACAAAGAATTAAAGGCA	5413038	True	NA	NA	False	AGTAAA	-20	NA	5422644	5462950	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_5423000_5436417_5436477_5437079_5437115_5439894_5439914_5441111_5441224_5443167_5443245_5444288_5444327_5447426_5447510_5447720_5447761_5447840_5447898_5454551_5454639_5457331_5457742_5460435
transcript_158217.nic	chr5	+	749	8	ISM	ENSG00000164151.12	ENST00000296564.9	7930	19	-32	42740	-32	-7135	5prime_fragment	FALSE	canonical	2	100	junction_3	54.418259240585	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTTGAAAAGGAATTTAAG	5413038	True	NA	NA	False	AAGAAA	-2	NA	5422644	5447480	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_5423000_5436417_5436477_5437079_5437115_5439894_5439914_5441111_5441224_5443167_5443245_5444288_5444327_5447426
transcript_158219.nic	chr5	+	658	6	ISM	ENSG00000164151.12	ENST00000296564.9	7930	19	-32	46975	-32	5409	5prime_fragment	FALSE	canonical	2	100	junction_3	55.6151058616272	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTAGTTACTAAATTACT	5413038	True	NA	NA	False	NA	NA	NA	5422644	5443245	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_5423000_5436417_5436477_5437079_5437115_5439894_5439914_5441111_5441224_5443167
transcript_15822.known	chr1	-	872	2	FSM	ENSG00000143319.17	ENST00000496538.1	872	2	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAGGGAAAAAGTCCTA	-156727271	False	NA	NA	False	NA	NA	NA	156727386	156723957	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156724349_156726905
transcript_158220.known	chr5	+	1074	3	FSM	ENSG00000164151.12	ENST00000505464.1	1074	3	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_1	2.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGGAGTCCCTGAAATTTA	5413135	True	NA	NA	False	AGTAAA	-17	NA	5422741	5437836	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_5423000_5436417_5436477_5437079
transcript_158223.known	chr5	-	1101	4	FSM	ENSG00000133398.4	ENST00000255764.4	1101	4	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_3	6.94422221866655	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTACTTTCCCAGAGGGT	-6372229	True	NA	0	True	AATATA	-27	NA	6378547	6371873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_6372602_6374323_6374427_6377165_6377250_6378361
transcript_158228.known	chr5	-	648	2	FSM	ENSG00000133398.4	ENST00000504058.1	648	2	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAAAGTCCTATGAGGGC	-6372253	True	NA	NA	False	NA	NA	NA	6378571	6376811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_6377250_6378361
transcript_15823.nic	chr1	-	972	6	NIC	ENSG00000143314.12	novel	883	6	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	1	18	junction_5	152.423882643108	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTGTACAGCTGCTGT	-156736877	True	NA	-11	True	AATAAA	-17	NA	156741096	156737302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_156737535_156737645_156737777_156738030_156738135_156738342_156738439_156738521_156738765_156740930
transcript_158235.known	chr5	-	3056	19	FSM	ENSG00000037474.15	ENST00000264670.11	3056	19	0	0	0	0	multi-exon	FALSE	canonical	3	633	junction_17	62.5707500788675	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTGTGATTCCTGTTT	-6614550	True	NA	36	True	AATAAA	-15	NA	6633044	6599238	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_6600233_6602460_6602501_6604137_6604277_6604604_6604686_6605272_6605409_6606819_6606913_6607199_6607385_6609825_6609923_6610954_6611086_6611724_6611799_6616726_6616858_6617949_6618025_6620105_6620299_6622015_6622101_6623213_6623286_6625563_6625670_6631872_6631978_6632598_6632757_6632883
transcript_158237.known	chr5	-	2619	18	FSM	ENSG00000037474.15	ENST00000506139.5	2619	18	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_16	177.02358453316	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTGCAGTATTTTTTAAA	-6614548	True	NA	NA	False	NA	NA	NA	6633042	6599568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_6600233_6602460_6602501_6604137_6604277_6604604_6604686_6605272_6605409_6606819_6606913_6607199_6607385_6609825_6609923_6610954_6611086_6611724_6611799_6616726_6616858_6617949_6618025_6620105_6620299_6622015_6622101_6623213_6623286_6625563_6625670_6632598_6632757_6632883
transcript_158239.known	chr5	-	3217	18	FSM	ENSG00000037474.15	ENST00000504374.5	3217	18	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_13	188.323857842085	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATGTGTGATTCCTGTT	-6632802	True	NA	35	True	AATAAA	-14	NA	6633291	6599239	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_6600233_6602460_6602501_6604137_6604277_6604604_6604686_6605272_6605409_6606819_6606913_6607199_6607385_6609825_6609923_6610954_6611086_6611724_6611799_6616726_6616858_6617949_6618025_6620105_6620299_6623213_6623286_6625563_6625670_6631872_6631978_6632598_6632757_6632883
transcript_15824.known	chr1	-	883	6	FSM	ENSG00000143314.12	ENST00000361531.6	883	6	0	0	0	0	multi-exon	FALSE	canonical	1	148	junction_2	104.296883941947	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTGTACAGCTGCTGT	-156736869	True	NA	-11	True	AATAAA	-17	NA	156741088	156737302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156737535_156737645_156737777_156738030_156738135_156738342_156738439_156738521_156738765_156741011
transcript_15825.known	chr1	-	883	6	FSM	ENSG00000143314.12	ENST00000368211.8	883	6	0	0	0	0	multi-exon	FALSE	canonical	1	148	junction_2	111.433208694715	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCCTGTGTACAGCTGCT	-156736912	True	NA	-13	True	AATAAA	-15	NA	156741131	156737304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156737535_156737645_156737777_156738030_156738135_156738342_156738439_156738521_156738765_156741052
transcript_158256.known	chr5	+	3778	3	FSM	ENSG00000250056.8	ENST00000664093.1	3778	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	3	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATAACCGTAGATTTGTC	6583167	True	NA	NA	False	ATTAAA	-8	NA	6583272	6589222	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_6583802_6585773_6586028_6586227
transcript_158257.known	chr5	+	3954	2	FSM	ENSG00000250056.8	ENST00000660957.2	3954	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAGATGCTAGTATTAAA	6583164	True	NA	NA	False	NA	NA	NA	6583269	6589195	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_6583802_6585773
transcript_158261.known	chr5	+	7035	5	FSM	ENSG00000145545.12	ENST00000274192.7	7035	5	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_4	10.8282039138539	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGTTTTGCTCATTGGAT	6630097	True	NA	35	True	ATTAAA	-30	NA	6633439	6674386	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_6633870_6651841_6652009_6656077_6656180_6662815_6662967_6668201
transcript_158267.known	chr5	+	1467	4	FSM	ENSG00000145545.12	ENST00000513117.1	1467	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	66.2134595246482	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCCCTAAACAGGCACCT	6630084	True	NA	NA	False	NA	NA	NA	6633426	6668972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_6633870_6656077_6656180_6662815_6662967_6668201
transcript_158268.nic	chr5	+	1532	2	ISM	ENSG00000145545.12	ENST00000504286.1	662	3	-66	634	-37	-634	5prime_fragment	FALSE	canonical	3	137	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGGGATCTTATATATAA	6630047	True	NA	NA	False	NA	NA	NA	6633389	6652893	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_6633870_6651841
transcript_158284.nnic	chr5	+	3960	25	NNC	ENSG00000078295.17	novel	756	7	NA	NA	-2033	0	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_1	228.339963407391	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACAGTGCCTGTATCTTT	7393959	True	NA	17	True	ATTAAA	-18	NA	7394104	7827532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_7394338_7414572_7414771_7520737_7520900_7626166_7626317_7690690_7690840_7695751_7695864_7698246_7698375_7706743_7706903_7707705_7707839_7709210_7709388_7712855_7712900_7717156_7717238_7724544_7724615_7727163_7727262_7743667_7743753_7757448_7757587_7766686_7766807_7772931_7773102_7784364_7784450_7789641_7789801_7802217_7802365_7804584_7804693_7816865_7816981_7820564_7820690_7826718
transcript_158285.nnic	chr5	+	3900	25	NNC	ENSG00000078295.17	novel	756	7	NA	NA	-1552	0	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_1	219.646587189259	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACAGTGCCTGTATCTTT	7394549	False	NA	17	True	ATTAAA	-18	NA	7394585	7827532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_7394759_7414572_7414771_7520737_7520900_7626166_7626317_7690690_7690840_7695751_7695864_7698246_7698375_7706743_7706903_7707705_7707839_7709210_7709388_7712855_7712900_7717156_7717238_7724544_7724615_7727163_7727262_7743667_7743753_7757448_7757587_7766686_7766807_7772931_7773102_7784364_7784450_7789641_7789801_7802217_7802365_7804584_7804693_7816865_7816981_7820564_7820690_7826718
transcript_158286.nnic	chr5	+	3830	25	NNC	ENSG00000078295.17	novel	756	7	NA	NA	-544	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	226.474980222246	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACAGTGCCTGTATCTTT	7395575	False	NA	17	True	ATTAAA	-18	NA	7395593	7827532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_7395697_7414572_7414771_7520737_7520900_7626166_7626317_7690690_7690840_7695751_7695864_7698246_7698375_7706743_7706903_7707705_7707839_7709210_7709388_7712855_7712900_7717156_7717238_7724544_7724615_7727163_7727262_7743667_7743753_7757448_7757587_7766686_7766807_7772931_7773102_7784364_7784450_7789641_7789801_7802217_7802365_7804584_7804693_7816865_7816981_7820564_7820690_7826718
transcript_158288.known	chr5	+	6645	25	FSM	ENSG00000078295.17	ENST00000338316.9	6645	25	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_19	185.208141169754	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAAAAGA	7396056	True	NA	NA	False	NA	NA	NA	7396137	7830081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_7396507_7414572_7414771_7520737_7520900_7626166_7626317_7690690_7690840_7695751_7695864_7698246_7698375_7706743_7706903_7707705_7707839_7709210_7709388_7712855_7712900_7717156_7717238_7724544_7724615_7727163_7727262_7743667_7743753_7757448_7757587_7766686_7766807_7772931_7773102_7784364_7784450_7789641_7789801_7802217_7802365_7804584_7804693_7816865_7816981_7820564_7820690_7826718
transcript_158305.nnic	chr5	+	2486	3	NNC	ENSG00000078295.17	novel	571	3	NA	NA	-1628	154	intron_retention	FALSE	canonical	3	82	junction_1	369	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCCGGGCGTGGTGGTGG	7394473	False	NA	NA	False	NA	NA	NA	7394509	7522776	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_7394759_7414572_7414771_7520737
transcript_158308.known	chr5	-	2028	3	FSM	ENSG00000215217.7	ENST00000399810.7	2028	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTCATTTACTTTCAG	-7851040	True	NA	NA	False	AATAAA	-17	NA	7851133	7830377	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_7832030_7835381_7835499_7850874
transcript_158311.known	chr5	+	3245	15	FSM	ENSG00000124275.15	ENST00000440940.7	3245	15	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_3	50.6071806633592	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCTTAAAACTTGGTAAG	7865080	True	NA	16	True	AATAAA	-19	NA	7869147	7901113	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_7869216_7870769_7870924_7873372_7873527_7875257_7875376_7877943_7878323_7883154_7883278_7885700_7885855_7886614_7886704_7889094_7889276_7891371_7891415_7892726_7892914_7895733_7895853_7896863_7896957_7897064_7897248_7899913
transcript_158315.nic	chr5	+	3266	15	NIC	ENSG00000124275.15	novel	3245	15	NA	NA	-12	0	intron_retention	FALSE	canonical	3	20	junction_8	73.3278909545115	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTAAGTTTTTGTGGCT	7865068	True	NA	27	True	AATAAA	-30	NA	7869135	7901124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_7869216_7870769_7870924_7875257_7875376_7877943_7878323_7883154_7883278_7885700_7885855_7886614_7886704_7889094_7889276_7890260_7890413_7891371_7891415_7892726_7892914_7895733_7895853_7896863_7896957_7897064_7897248_7899913
transcript_158316.known	chr5	+	3274	15	FSM	ENSG00000124275.15	ENST00000264668.6	3274	15	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	64.9036963193805	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTAAGTTTTTGTGGCT	NA	False	NA	27	True	AATAAA	-30	NA	7869103	7901124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_7869190_7870769_7870924_7873372_7873527_7875257_7875376_7877943_7878323_7883154_7883278_7885700_7885855_7886614_7886704_7889094_7889276_7891371_7891415_7892726_7892914_7895733_7895853_7896863_7896957_7897064_7897248_7899913
transcript_158319.nic	chr5	+	3114	14	NIC	ENSG00000124275.15	novel	3076	14	NA	NA	-12	0	intron_retention	FALSE	canonical	3	135	junction_1	40.527585754651	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTAAGTTTTTGTGGCT	7865068	True	NA	27	True	AATAAA	-30	NA	7869135	7901124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_7869216_7870769_7870924_7875257_7875376_7877943_7878323_7883154_7883278_7885700_7885855_7886614_7886704_7889094_7889276_7891371_7891415_7892726_7892914_7895733_7895853_7896863_7896957_7897064_7897248_7899913
transcript_158324.known	chr5	+	3076	14	FSM	ENSG00000124275.15	ENST00000511461.5	3076	14	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	59.8215294406235	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTAAGTTTTTGTGGCT	7865080	True	NA	27	True	AATAAA	-30	NA	7869147	7901124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_7869190_7870769_7870924_7875257_7875376_7877943_7878323_7883154_7883278_7885700_7885855_7886614_7886704_7889094_7889276_7891371_7891415_7892726_7892914_7895733_7895853_7896863_7896957_7897064_7897248_7899913
transcript_158328.nic	chr5	+	3025	13	NIC	ENSG00000124275.15	novel	3076	14	NA	NA	-12	0	intron_retention	FALSE	canonical	3	26	junction_6	64.5611252139311	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTAAGTTTTTGTGGCT	7865068	True	NA	27	True	AATAAA	-30	NA	7869135	7901124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_7869216_7870769_7870924_7875257_7875376_7877943_7878323_7883154_7883278_7885700_7885855_7889094_7889276_7891371_7891415_7892726_7892914_7895733_7895853_7896863_7896957_7897064_7897248_7899913
transcript_158332.nic	chr5	-	2342	7	NIC	ENSG00000124279.12	novel	2431	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	34	junction_6	40.2012299424892	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCATAGTTATCTGCT	-7867750	True	NA	-9	True	AATAAA	-16	NA	7869031	7859158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_7859540_7861148_7861264_7861582_7861653_7862822_7862998_7865897_7865984_7866645_7868108_7868978
transcript_158333.known	chr5	-	2431	7	FSM	ENSG00000124279.12	ENST00000264669.10	2431	7	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_6	35.0460015154685	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCATAGTTATCTGCT	-7867750	True	NA	-9	True	AATAAA	-16	NA	7869031	7859158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_7859540_7861148_7861264_7861582_7861653_7862822_7862998_7865897_7865984_7866645_7868197_7868978
transcript_158334.known	chr5	-	637	6	FSM	ENSG00000124279.12	ENST00000282110.8	637	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	52.5067614693574	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATTAAAAGAAAAATATAAT	-7867729	True	NA	NA	False	NA	NA	NA	7869010	7859380	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_7859540_7861148_7861264_7861582_7861653_7862822_7862998_7865897_7865984_7868978
transcript_158337.known	chr5	-	819	6	FSM	ENSG00000124279.12	ENST00000513658.5	819	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	65.2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTAGACTGGTGATCTGA	-7867745	True	NA	NA	False	ATTAAA	-39	NA	7869026	7859335	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_7859540_7861148_7861264_7861582_7861774_7862822_7862998_7865897_7865984_7868978
transcript_158338.known	chr5	+	546	4	FSM	ENSG00000124275.15	ENST00000510279.5	546	4	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	46.6499970227461	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGAGGTTTTGAAGCAA	7865080	True	NA	NA	False	AAGAAA	-3	NA	7869147	7878149	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_7869216_7870769_7870924_7875257_7875376_7877943
transcript_158339.known	chr5	+	574	3	FSM	ENSG00000124275.15	ENST00000507837.5	574	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATAACTTCCATCATTCC	7851052	False	NA	NA	False	AAGAAA	-34	NA	7851185	7862018	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_7851586_7856786_7856893_7861950
transcript_158341.known	chr5	+	3239	2	FSM	ENSG00000247516.8	ENST00000606459.1	3239	2	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTCCTTTTCAGTTGTT	8456805	True	NA	NA	False	AATAAA	-15	NA	8457690	8463095	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_8457767_8459932
transcript_158347.known	chr5	-	11755	23	FSM	ENSG00000112902.12	ENST00000382496.10	11755	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	3.77792631912366	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTAGTGGCATTTTTCT	-9545477	True	NA	NA	False	AATAAA	-18	NA	9546075	9035032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_9043017_9044372_9044585_9050409_9050458_9051872_9052029_9054086_9054258_9062886_9063106_9066420_9066647_9108139_9108288_9118997_9119142_9122655_9122838_9136503_9136622_9154487_9154696_9190266_9190472_9197167_9197304_9201954_9202241_9224673_9224888_9226868_9226968_9237827_9237891_9318371_9318418_9337712_9337813_9379822_9380024_9437755_9437853_9545583
transcript_158349.known	chr5	+	1799	3	FSM	ENSG00000250786.3	ENST00000508179.2	1919	3	4	116	4	-116	multi-exon	FALSE	canonical	3	40	junction_2	28	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAATGTCCTCTCTATTC	9545114	True	NA	NA	False	AAAAAG	-19	NA	9546199	9550609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_9546531_9548989_9549150_9549301
transcript_158350.known	chr5	+	842	2	FSM	ENSG00000250786.3	ENST00000655411.1	436	2	5	-411	5	411	multi-exon	FALSE	canonical	3	96	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAACGTCTTTAGGGTTCT	9545204	True	NA	NA	False	NA	NA	NA	9546289	9549590	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_9546531_9548989
transcript_158351.known	chr5	-	2651	5	FSM	ENSG00000150756.14	ENST00000511437.6	2651	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	12.3161479367536	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCCCAGCCTCAGGTATGT	-10248902	True	NA	-3	True	ATTAAA	-18	NA	10249888	10225506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_10227648_10235210_10235262_10236477_10236616_10239066_10239357_10249857
transcript_158361.known	chr5	+	3293	11	FSM	ENSG00000150753.12	ENST00000280326.9	3293	11	0	0	0	0	multi-exon	FALSE	canonical	3	4165	junction_6	242.619063554371	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTATTTTTCACGTT	10190751	True	NA	15	True	AATAAA	-15	NA	10250279	10266389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_10250446_10254144_10254206_10254673_10254839_10255954_10256154_10258110_10258304_10258385_10258536_10260791_10260912_10261559_10261746_10262480_10262619_10263133_10263315_10264655
transcript_158371.known	chr5	+	1997	11	FSM	ENSG00000150753.12	ENST00000515676.5	1997	11	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_1	1284.3152416755	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAGCTGTTTGGTAAC	10250516	False	NA	8	True	NA	NA	NA	10250536	10264902	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_10250894_10254144_10254206_10254673_10254839_10255954_10256154_10258110_10258304_10258385_10258536_10260791_10260912_10261559_10261746_10262480_10262619_10263133_10263315_10264655
transcript_158387.known	chr5	+	1728	10	FSM	ENSG00000150753.12	ENST00000515390.5	1728	10	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_2	1323.84650932308	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCACTTGTTCAAAGCT	10190687	True	NA	31	True	AATAAA	-21	NA	10250215	10264925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_10250446_10254144_10254206_10255954_10256154_10258110_10258304_10258385_10258536_10260791_10260912_10261559_10261746_10262480_10262619_10263133_10263315_10264655
transcript_15839.nic	chr1	+	2201	8	NIC	ENSG00000143294.15	novel	2068	7	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_4	497.450561588275	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGCCTGCCCTGTCCCTG	156757628	True	NA	18	True	AATAAA	-18	NA	156767497	156800815	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_156768240_156782281_156782330_156786607_156787175_156791066_156791163_156791696_156791793_156794664_156794809_156797275_156797342_156800373
transcript_158410.known	chr5	-	3893	6	FSM	ENSG00000164237.9	ENST00000296658.4	3893	6	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	21.7678662252413	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAAGTGAAATTAATTTTA	-10304084	True	NA	NA	False	ATTAAA	-14	NA	10307902	10277594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_10280633_10282196_10282289_10286353_10286497_10288421_10288530_10290547_10290782_10307624
transcript_158416.known	chr5	-	796	4	FSM	ENSG00000164237.9	ENST00000511963.5	796	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	79.6157438366726	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTTGGGAAAGCCACCTA	-10307575	False	NA	NA	False	NA	NA	NA	10307603	10286131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_10286497_10288421_10288530_10290547_10290782_10307514
transcript_158417.known	chr5	-	901	4	FSM	ENSG00000164237.9	ENST00000506821.1	901	4	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_2	8.49836585598797	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGTCACCGGGAGTCAAG	-10304041	True	NA	NA	False	AATAGA	-30	NA	10307859	10286172	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_10286497_10288421_10288530_10290547_10290782_10307624
transcript_158420.known	chr5	-	901	1	FSM	ENSG00000259802.1	ENST00000561606.1	901	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCGCTTGACTAATGTTA	-10353190	True	NA	-2	True	AATAAA	-29	NA	10353601	10352700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_10352700_10353600
transcript_158421.known	chr5	+	9641	26	FSM	ENSG00000145495.16	ENST00000274140.10	9641	26	0	0	0	0	multi-exon	TRUE	canonical	3	115	junction_1	29.1516311722003	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTTTGACAAGATGCTT	10353521	True	NA	NA	False	AATAAA	-17	NA	10353694	10440388	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_10353918_10377797_10377895_10378758_10378833_10381799_10381944_10386993_10387067_10390331_10390501_10391541_10391732_10394081_10394144_10394752_10394786_10397292_10397345_10400783_10400843_10402058_10402140_10402383_10402453_10402532_10402608_10403406_10403542_10405557_10405678_10407101_10407203_10410138_10410277_10411332_10411538_10414432_10414503_10415487_10415670_10417269_10417405_10423734_10423825_10426389_10426523_10429892_10430029_10433593
transcript_158425.known	chr5	+	4734	25	FSM	ENSG00000145495.16	ENST00000511802.5	4734	25	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	28.6407040862398	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTACTGCCTGATTTTT	10351664	True	NA	4	True	NA	NA	NA	10353714	10434285	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_10353918_10377797_10377895_10378758_10378833_10381799_10381944_10386993_10387067_10390331_10390501_10391541_10391732_10394081_10394144_10394752_10394786_10397292_10397345_10400783_10402140_10402383_10402453_10402532_10402608_10403406_10403542_10405557_10405678_10407101_10407203_10410138_10410277_10411332_10411538_10414432_10414503_10415487_10415670_10417269_10417405_10423734_10423825_10426389_10426523_10429892_10430029_10433593
transcript_158429.known	chr5	+	1061	5	FSM	ENSG00000145491.12	ENST00000274134.5	1061	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.22474487139159	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTCTGTAGTGTGAGTGT	10441827	True	NA	NA	False	AATACA	-18	NA	10441878	10465026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_10442299_10448259_10448384_10449951_10450114_10461183_10461360_10464847
transcript_158433.known	chr5	-	2301	4	FSM	ENSG00000112977.16	ENST00000230895.11	2301	4	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_3	27.0102861065105	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTTTTTTCTTATAGA	-10756591	True	NA	0	True	AATAAA	-20	NA	10761234	10679229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_10681170_10683528_10683572_10748174_10748272_10761013
transcript_158435.known	chr5	-	780	3	FSM	ENSG00000112977.16	ENST00000510546.1	780	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	207	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTTTCCAGTTGGTGAA	-10756556	True	NA	NA	False	GATAAA	-24	NA	10761199	10733771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_10734269_10748174_10748272_10761013
transcript_158436.known	chr5	-	277	2	FSM	ENSG00000112977.16	ENST00000508646.1	277	2	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGGGCTATGTGGGGCC	-10761057	False	NA	NA	False	NA	NA	NA	10761101	10748082	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_10748272_10761013
transcript_158439.known	chr5	-	5888	22	FSM	ENSG00000169862.20	ENST00000304623.13	5888	22	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_16	5.58342217413328	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTGCCATCGTCCTTTA	-11904156	True	NA	NA	False	AATAAA	-21	NA	11904446	10971835	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_10973714_10981772_10981847_10988110_10988243_10992550_10992678_11017973_11018059_11022768_11022980_11082695_11082847_11098574_11098749_11110857_11111044_11117449_11117568_11159575_11159760_11199447_11199662_11236690_11236824_11346371_11346628_11364695_11364891_11384664_11385230_11397030_11397204_11411535_11411653_11412034_11412070_11564943_11565057_11732135_11732273_11903816
transcript_158441.known	chr5	+	7040	8	FSM	ENSG00000145569.6	ENST00000274217.4	7040	8	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	8.83869045614744	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGAGTTTCAGGCAAGATT	14581084	True	NA	NA	False	AATAAA	-28	NA	14581791	14616180	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_14581959_14600964_14601125_14601212_14601245_14601350_14601443_14602182_14602333_14607329_14607459_14608747_14609018_14610140
transcript_158444.known	chr5	+	7969	7	FSM	ENSG00000154124.5	ENST00000284274.5	7969	7	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	8.31497978884428	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGGGCTCGGTTGCCTGT	14661813	True	NA	NA	False	NA	NA	NA	14664717	14699850	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_14664978_14673641_14673719_14678680_14678776_14681463_14681608_14687520_14687647_14690038_14690309_14692853
transcript_158454.known	chr5	+	742	2	FSM	ENSG00000154124.5	ENST00000507335.1	742	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGATGGGATCAGTAGCAC	14661827	True	NA	NA	False	AAGAAA	-4	NA	14664731	14674137	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_14664978_14673641
transcript_158455.known	chr5	+	420	4	FSM	ENSG00000154124.5	ENST00000514913.1	420	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	29.9332590941915	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTAAACAGAGCCATTGAAC	NA	False	NA	NA	False	AATATA	-29	NA	14678755	14690151	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_14678776_14681463_14681625_14687520_14687647_14690038
transcript_158458.known	chr5	-	8207	12	FSM	ENSG00000154122.14	ENST00000284268.8	8207	12	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_11	7.90229593167299	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGCTTTTAGTTTCTTGA	-14871401	True	NA	NA	False	AGTAAA	-26	NA	14871778	14704799	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_14711311_14712873_14712974_14713543_14713668_14716705_14716836_14741826_14741923_14745869_14745963_14749171_14749307_14751068_14751240_14755860_14755945_14758479_14758599_14768974_14769192_14871351
transcript_158462.known	chr5	+	3817	2	FSM	ENSG00000286970.1	ENST00000659482.1	3817	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATGTTACTTCATTAAAC	14728695	True	NA	NA	False	NA	NA	NA	14728717	14733540	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_14728973_14729978
transcript_158463.known	chr5	+	3960	2	FSM	ENSG00000183580.10	ENST00000329673.8	3960	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTCAGCTTCATTTTTAA	NA	False	NA	8	True	AATAAA	-18	NA	15927887	15939795	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_15928502_15936449
transcript_158466.known	chr5	-	1707	6	FSM	ENSG00000173545.5	ENST00000308683.3	1707	6	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_5	28.7930547181087	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTTCAGATGTCGTTT	-16460088	True	NA	-9	True	AATAAA	-14	NA	16465800	16451518	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_16451785_16453012_16453157_16458516_16458630_16463107_16463271_16463481_16463743_16465040
transcript_158472.known	chr5	-	4839	23	FSM	ENSG00000145555.15	ENST00000515803.5	4839	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	103.274537836241	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACTAATCGACCGTAACT	-16738248	False	160	NA	False	NA	NA	NA	16738414	16666379	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_16666794_16668276_16668469_16670525_16670979_16671421_16671543_16672688_16672826_16673681_16673890_16674852_16675151_16676030_16676155_16679946_16680105_16681308_16681504_16681870_16682014_16683879_16683936_16685737_16685832_16689823_16689920_16694370_16694615_16699449_16699574_16700962_16701839_16702542_16702589_16702924_16703159_16704578_16704686_16710907_16711023_16711120_16711246_16738135
transcript_158474.known	chr5	-	4803	23	FSM	ENSG00000145555.15	ENST00000505695.5	4803	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	107.425738332107	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGGTGTCTCCGAGGATC	-16742062	True	NA	NA	False	AAAACA	-42	NA	16742228	16666561	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_16666794_16668276_16668469_16670525_16670979_16671421_16671543_16672688_16672826_16673681_16673890_16674852_16675151_16676030_16676155_16679946_16680105_16681308_16681504_16681870_16682014_16683879_16683936_16685737_16685832_16689823_16689920_16694370_16694615_16699449_16699574_16700962_16701839_16702542_16702589_16702924_16703159_16704578_16704686_16710907_16711023_16711120_16711246_16741803
transcript_158480.nic	chr5	-	2969	23	ISM	ENSG00000145555.15	ENST00000513610.6	11442	41	-31	41070	-31	0	5prime_fragment	FALSE	canonical	0	0	junction_3	80.8924012408607	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAGAAACAGGAAGAG	-16934115	True	NA	9	True	NA	NA	NA	16936319	16702976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_16703159_16704578_16704686_16710907_16711023_16711120_16711246_16754827_16754909_16758117_16758227_16761463_16761547_16762044_16762114_16762544_16762638_16763480_16763548_16763654_16763756_16764249_16764397_16766079_16766199_16769073_16769204_16779544_16779649_16780523_16780609_16780727_16780742_16781704_16781830_16783334_16783470_16794645_16794834_16818008_16818168_16877608_16877708_16935787
transcript_15849.known	chr1	+	2068	7	FSM	ENSG00000143294.15	ENST00000271526.9	2068	7	0	0	0	0	multi-exon	FALSE	canonical	3	972	junction_3	113.643692692947	2085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGCCTGCCCTGTCCCTG	156757665	True	NA	18	True	AATAAA	-18	NA	156767534	156800815	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_156768240_156782281_156782330_156786607_156787175_156791696_156791793_156794664_156794809_156797275_156797342_156800373
transcript_158495.nic	chr5	-	771	5	ISM	ENSG00000145555.15	ENST00000515803.5	4839	23	37	36597	37	0	5prime_fragment	FALSE	canonical	0	0	junction_3	141.355049432272	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAGAAACAGGAAGAG	-16738211	False	NA	9	True	NA	NA	NA	16738377	16702976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_16703159_16704578_16704686_16710907_16711023_16711120_16711246_16738135
transcript_158496.nnic	chr5	-	685	5	NNC	ENSG00000145555.15	novel	2910	23	NA	NA	904	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	162.891643432068	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAGAAACAGGAAGAG	-16740810	False	1287	9	True	NA	NA	NA	16740976	16702976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_16703159_16704578_16704686_16710907_16711023_16711120_16711246_16740820
transcript_158497.nic	chr5	-	1003	5	ISM	ENSG00000145555.15	ENST00000505695.5	4803	23	-49	36415	-49	0	5prime_fragment	FALSE	canonical	0	0	junction_3	147.431975839707	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAGAAACAGGAAGAG	NA	False	NA	9	True	NA	NA	NA	16742277	16702976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_16703159_16704578_16704686_16710907_16711023_16711120_16711246_16741803
transcript_1585.known	chr1	+	2577	6	FSM	ENSG00000157870.17	ENST00000484099.5	2577	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	160.288989016713	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGCTTTCTTCTTTT	2585257	False	NA	20	True	AATAAA	-20	NA	2587077	2591469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_2587296_2587740_2587793_2588389_2588454_2588529_2588626_2588953_2589041_2589409
transcript_158502.known	chr5	-	1677	4	FSM	ENSG00000145555.15	ENST00000507288.1	1677	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	32.4995726467629	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTGCATTAGTTTTCTT	-16934055	True	NA	1	True	AATAAA	-21	NA	16936259	16814516	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_16815464_16818008_16818168_16877608_16877708_16935787
transcript_158503.known	chr5	-	582	3	FSM	ENSG00000145555.15	ENST00000508318.5	582	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	45.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTAATTGTTTGTGTGTG	-16740622	True	NA	NA	False	NA	NA	NA	16741909	16710671	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_16711023_16711120_16711246_16741803
transcript_158504.known	chr5	+	1807	2	FSM	ENSG00000176788.9	ENST00000322611.4	1807	2	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_1	0	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATAAAGACTATTGGGTT	17201466	True	NA	5	True	AATAAA	-20	NA	17217630	17276834	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_17217811_17275207
transcript_158507.known	chr5	+	1711	2	FSM	ENSG00000176788.9	ENST00000616743.1	1711	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTATTGGGTTTTTTGTTCT	17216779	False	NA	14	True	AATAAA	-29	NA	17216822	17276843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_17216898_17275207
transcript_158508.known	chr5	+	1305	4	FSM	ENSG00000183666.18	ENST00000685140.1	1644	4	61	278	0	1	multi-exon	FALSE	canonical	3	17	junction_3	9.56846672960488	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTATTTTTATTTATGT	21458312	True	NA	NA	False	AATAAA	-22	NA	21459512	21474439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_21459585_21459677_21459744_21461782_21461867_21473356
transcript_158509.known	chr5	+	4157	5	FSM	ENSG00000183666.18	ENST00000607545.5	4157	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	15.9902313929474	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTTGTCATATTTATT	21458355	True	NA	NA	False	AATAAA	-18	NA	21459555	21589372	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_21459585_21459677_21459744_21461782_21461867_21501691_21501827_21585529
transcript_158517.nnic	chr5	-	1038	4	NNC	ENSG00000248605.5	novel	638	3	NA	NA	0	174	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	37.7211994624891	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTGATTTTGAGAGTATT	-25445310	True	NA	-6	True	AATAAA	-33	NA	25445925	25413264	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_25413845_25415574_25415801_25422729_25422856_25445819
transcript_158524.known	chr5	-	638	3	FSM	ENSG00000248605.5	ENST00000507887.5	638	3	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	9	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAAACTCTATTTTTCTC	-25445310	True	NA	-68	True	NA	NA	NA	25445925	25413438	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_25413845_25422729_25422856_25445819
transcript_158529.nnic	chr5	-	547	3	NNC	ENSG00000248605.5	novel	638	3	NA	NA	0	-18157	at_least_one_novel_splicesite	FALSE	canonical	3	87	junction_1	30.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAGAAAGGACTCCAAGT	-25445310	True	NA	NA	False	AAAAAG	-10	NA	25445925	25433802	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_25434212_25435241_25435274_25445819
transcript_158533.nnic	chr5	-	712	2	NIC	ENSG00000248605.5	novel	638	3	NA	NA	-43	157	combination_of_known_splicesites	FALSE	canonical	3	49	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTTGATATTTTAAACAA	-25445353	True	NA	-23	True	AATAAA	-16	NA	25445968	25413281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_25413845_25445819
transcript_158534.nnic	chr5	-	470	2	NIC	ENSG00000248605.5	novel	638	3	NA	NA	-43	-85	combination_of_known_splicesites	FALSE	canonical	3	49	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTGAAAGTTTATTTAC	-25445353	True	NA	NA	False	CATAAA	-11	NA	25445968	25413523	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_25413845_25445819
transcript_158535.nnic	chr5	-	530	2	NNC	ENSG00000248605.5	novel	638	3	NA	NA	-15	-18157	at_least_one_novel_splicesite	FALSE	canonical	3	104	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAGAAAGGACTCCAAGT	-25445325	True	NA	NA	False	AAAAAG	-10	NA	25445940	25433802	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_25434212_25445819
transcript_158537.known	chr5	+	1177	6	FSM	ENSG00000250337.8	ENST00000514844.6	1177	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	44.1107696600275	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTCATTTTGTAATTAC	27467022	True	NA	15	True	AATAAA	-27	NA	27472270	27496405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_27472520_27475534_27475696_27484925_27485030_27489281_27489387_27494234_27494336_27495948
transcript_158544.known	chr5	+	1117	5	FSM	ENSG00000250337.8	ENST00000510165.6	1117	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	45.702160780427	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTCATTTTGTAATTA	27467035	True	NA	14	True	AATAAA	-26	NA	27472283	27496404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_27472520_27475534_27475696_27477638_27477802_27494234_27494336_27495948
transcript_158546.known	chr5	+	1325	4	FSM	ENSG00000250337.8	ENST00000659860.1	1325	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	33.7276675083759	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTAGCCTAATGTCATT	27467031	True	NA	NA	False	AATAAA	-28	NA	27472279	27485686	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_27472520_27475534_27475696_27477638_27477802_27484925
transcript_158549.known	chr5	+	971	4	FSM	ENSG00000250337.8	ENST00000659077.1	971	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	50.3940031705714	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTCATTTTGTAATTA	27467021	True	NA	14	True	AATAAA	-26	NA	27472269	27496404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_27472520_27475534_27475696_27484925_27485030_27495948
transcript_158550.nic	chr5	+	2528	3	ISM	ENSG00000250337.8	ENST00000687778.1	755	5	-53	4370	16	157	intron_retention	FALSE	canonical	3	21	junction_2	51.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGACATAATAAAACACCT	NA	False	NA	46	True	AAAAAG	-17	NA	27472250	27478184	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_27472520_27475534_27475696_27476086
transcript_158553.known	chr5	+	1610	3	FSM	ENSG00000250337.8	ENST00000512067.5	1610	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	49	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAATTGAAATAACTTA	27467043	True	NA	NA	False	ATTAAA	-9	NA	27472291	27486146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_27472520_27475534_27475696_27484925
transcript_158559.nic	chr5	+	2774	2	FSM	ENSG00000250337.8	ENST00000688783.1	2712	2	-50	-12	16	12	multi-exon	FALSE	canonical	3	124	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTCACAGCCCTAGAGAA	NA	False	NA	-99	True	ATTAAA	-32	NA	27472250	27478039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_27472520_27475534
transcript_158560.nic	chr5	+	2919	2	FSM	ENSG00000250337.8	ENST00000688783.1	2712	2	-50	-157	16	157	multi-exon	FALSE	canonical	3	124	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGACATAATAAAACACCT	NA	False	NA	46	True	AAAAAG	-17	NA	27472250	27478184	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_27472520_27475534
transcript_158561.known	chr5	+	1088	5	FSM	ENSG00000250337.8	ENST00000667624.1	1088	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	46.7406407743839	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTCATTTTGTAATTA	27467035	True	NA	14	True	AATAAA	-26	NA	27472283	27496404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_27472520_27475534_27475696_27476086_27476159_27477638_27477802_27495948
transcript_158562.known	chr5	+	925	4	FSM	ENSG00000250337.8	ENST00000667420.1	925	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	54.1869192907497	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTCATTTTGTAATTA	27467035	True	NA	14	True	AATAAA	-26	NA	27472283	27496404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_27472520_27475534_27475696_27476086_27476159_27495948
transcript_158563.known	chr5	+	8540	12	FSM	ENSG00000113361.13	ENST00000265071.3	8540	12	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_7	3.01511344577764	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTTTTTTTCAATTCT	31193446	True	NA	NA	False	AATAAA	-16	NA	31193685	31329146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_31193887_31267345_31267702_31293961_31294257_31297288_31297409_31299463_31299632_31302110_31302299_31305173_31305428_31313317_31313455_31316207_31316330_31317374_31317493_31317672_31317925_31322817
transcript_158565.known	chr5	+	2569	11	FSM	ENSG00000113361.13	ENST00000514738.5	2569	11	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_7	2.87054001888146	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTATGATGACTTTTCTC	31193510	True	NA	NA	False	TATAAA	-36	NA	31193749	31318346	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_31193887_31267345_31267702_31293961_31294257_31297288_31297409_31299463_31299632_31302110_31302299_31305173_31305428_31313317_31313455_31316207_31316330_31317374_31317493_31317672
transcript_158567.known	chr5	+	2759	2	FSM	ENSG00000113361.13	ENST00000506396.1	2759	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCTGAAGTAAGATTATT	31193529	True	NA	NA	False	AATAAA	-15	NA	31193768	31251854	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_31193887_31249213
transcript_158569.known	chr5	-	5416	36	FSM	ENSG00000113360.17	ENST00000344624.8	5416	36	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_30	67.6136443179865	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTCATTCATCATTTC	-31522557	True	NA	NA	False	AATAAA	-25	NA	31532093	31400493	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_31401563_31405676_31405724_31406852_31406946_31409055_31409160_31409249_31409333_31410745_31410888_31421271_31421378_31422786_31422945_31424426_31424472_31429474_31429546_31431575_31431679_31435764_31435865_31437238_31437299_31448546_31448608_31449280_31449420_31451532_31451641_31464235_31464344_31466181_31466282_31467938_31468064_31472062_31472233_31483553_31483629_31484880_31484963_31486490_31486563_31493206_31493294_31495285_31495373_31504554_31504636_31508620_31508776_31511034_31511177_31514987_31515220_31515453_31515565_31521122_31521216_31526078_31526913_31529039_31529106_31530797_31530925_31531449_31531526_31531989
transcript_158577.known	chr5	-	5305	35	FSM	ENSG00000113360.17	ENST00000511367.6	5305	35	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_34	76.3270882089948	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTGTTTCATTCATCAT	-31522525	True	NA	NA	False	AATAAA	-22	NA	31532061	31400496	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_31401563_31405676_31405724_31406852_31406946_31409055_31409160_31409249_31409333_31410745_31410888_31421271_31421378_31422786_31422945_31424426_31424472_31429474_31429546_31431575_31431679_31435764_31435865_31437238_31437299_31448546_31448608_31449280_31449420_31451532_31451641_31464235_31464344_31466181_31466282_31467938_31468064_31472062_31472233_31483553_31483629_31484880_31484963_31486490_31486563_31493206_31493294_31495285_31495373_31504554_31504636_31508620_31508776_31511034_31511177_31514987_31515220_31515453_31515565_31521122_31521216_31526078_31526913_31529039_31529106_31530797_31530925_31531989
transcript_158579.known	chr5	-	4681	35	FSM	ENSG00000113360.17	ENST00000513349.5	4681	35	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_29	71.9992610977079	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTTTCCATCTGTGTCC	-31522573	True	NA	NA	False	AATAAA	-33	NA	31532109	31401133	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_31401563_31405676_31405724_31406852_31406946_31409055_31409160_31409249_31409333_31410745_31410888_31421271_31421378_31422786_31422945_31424426_31424472_31429474_31429546_31431575_31431679_31435764_31435865_31437238_31437299_31448546_31448608_31449280_31449420_31451532_31451641_31464235_31464344_31466181_31466282_31467938_31468064_31472062_31472233_31483553_31483629_31484880_31484963_31486490_31486563_31493206_31493294_31495285_31495373_31504554_31504636_31508620_31508776_31511034_31511177_31514987_31515220_31521122_31521216_31526078_31526913_31529039_31529106_31530797_31530925_31531449_31531526_31531989
transcript_15859.nic	chr1	+	1994	6	NIC	ENSG00000143294.15	novel	2068	7	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_3	443.570332641848	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGCCTGCCCTGTCCCTG	156757643	True	NA	18	True	AATAAA	-18	NA	156767512	156800815	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_156768240_156782281_156782330_156786607_156787175_156794664_156794809_156797275_156797342_156800373
transcript_158605.nic	chr5	+	3270	9	NIC	ENSG00000082213.18	novel	3572	9	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_2	89.0286997265489	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAAGGTTTGTTTAATTC	31528367	True	NA	17	True	AATAAA	-18	NA	31532265	31554808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_31532474_31534271_31534326_31535743_31535894_31538259_31538690_31540948_31541012_31541280_31541403_31545645_31545713_31551292_31551433_31552772
transcript_158609.nic	chr5	+	3046	9	NIC	ENSG00000082213.18	novel	3117	9	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	122.50790790802	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAAGGTTTGTTTAATTC	31528367	True	NA	17	True	AATAAA	-18	NA	31532265	31554808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_31532474_31534271_31534326_31535743_31535894_31538483_31538690_31540948_31541012_31541280_31541403_31545645_31545713_31551292_31551433_31552772
transcript_158612.known	chr5	+	3572	9	FSM	ENSG00000082213.18	ENST00000325366.14	3572	9	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_2	29.3342802877453	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGACTTAAGTGTAAGCGT	31528402	True	NA	19	True	ATTAAA	-30	NA	31532300	31555053	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_31532474_31534271_31534418_31535743_31535894_31538259_31538690_31540948_31541012_31541280_31541403_31545645_31545713_31551292_31551433_31552772
transcript_158614.nic	chr5	+	3141	9	NIC	ENSG00000082213.18	novel	3117	9	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_3	96.5361816885255	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAAGGTTTGTTTAATTC	31528367	True	NA	17	True	AATAAA	-18	NA	31532265	31554808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_31532474_31534271_31534418_31535743_31535894_31538480_31538690_31540948_31541012_31541280_31541403_31545645_31545713_31551292_31551433_31552772
transcript_158615.known	chr5	+	3117	9	FSM	ENSG00000082213.18	ENST00000510659.5	3117	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	99.060508655064	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAAGGTTTGTTTAATTC	31528388	True	NA	17	True	AATAAA	-18	NA	31532286	31554808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_31532474_31534271_31534418_31535743_31535894_31538483_31538690_31540948_31541012_31541280_31541403_31545645_31545713_31551292_31551433_31552772
transcript_15862.known	chr1	-	966	6	FSM	ENSG00000143321.19	ENST00000482651.5	966	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	545.373486704295	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGCTGGGGCCTGGGAC	-156747417	False	NA	NA	False	NA	NA	NA	156747471	156743155	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156743456_156743651_156743879_156744162_156744349_156745007_156745147_156745296_156745374_156747434
transcript_158623.nnic	chr5	+	539	3	NNC	ENSG00000133401.16	novel	11984	25	NA	NA	-25	-152764	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	34	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATTTTTGTGTGTTGGCC	31638396	True	NA	10	True	AATAAA	-20	NA	31639105	31646525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_31639438_31646140_31646260_31646437
transcript_158625.nnic	chr5	-	2897	4	NNC	ENSG00000113384.14	novel	2678	4	NA	NA	515	0	at_least_one_novel_splicesite	FALSE	canonical	1	40	junction_3	377.462580926905	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGCAAGCATGTCATTT	-32173754	False	7584	-11	True	AATAAA	-28	NA	32173787	32124715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_32126637_32135571_32135687_32143748_32143881_32173058
transcript_158627.known	chr5	-	1074	4	FSM	ENSG00000113384.14	ENST00000503610.5	1074	4	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_3	345.460401332611	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGAGAATGCTTTTGCT	-32166718	True	NA	NA	False	NA	NA	NA	32174302	32126366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_32126637_32135571_32135687_32143748_32143881_32173745
transcript_158628.known	chr5	-	2678	4	FSM	ENSG00000113384.14	ENST00000265070.7	2678	4	0	0	0	0	multi-exon	FALSE	canonical	3	814	junction_2	33.436506994601	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGCAAGCATGTCATTT	-32166735	True	NA	-11	True	AATAAA	-28	NA	32174319	32124715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_32126637_32135571_32135687_32143748_32143881_32173809
transcript_158631.known	chr5	-	5116	16	FSM	ENSG00000150712.11	ENST00000382142.8	5116	16	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	18.1365193279563	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTACTTGGTGTGGTTG	-32307903	True	NA	-6	True	ATTAAA	-18	NA	32312939	32227006	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_32230348_32233772_32233935_32234961_32235130_32239000_32239174_32242056_32242128_32243520_32243600_32248001_32248127_32248771_32248879_32255692_32255769_32263112_32263243_32268700_32268795_32270816_32270948_32271832_32271906_32273979_32274123_32276681_32276743_32312757
transcript_158638.known	chr5	-	4966	15	FSM	ENSG00000150712.11	ENST00000280285.9	4966	15	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	60.1840713891939	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTTGGTATAACACATGG	-32307902	True	NA	7	True	ATTAAA	-31	NA	32312938	32226993	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_32230348_32234961_32235130_32239000_32239174_32242056_32242128_32243520_32243600_32248001_32248127_32248771_32248879_32255692_32255769_32263112_32263243_32268700_32268795_32270816_32270948_32271832_32271906_32273979_32274123_32276681_32276743_32312757
transcript_15864.known	chr1	-	2309	6	FSM	ENSG00000143321.19	ENST00000357325.10	2309	6	0	0	0	0	multi-exon	FALSE	canonical	3	1328	junction_4	25.2618289124125	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGATTCTGACTGATTC	-156723092	True	NA	-6	True	AATAAA	-16	NA	156751675	156742108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156743456_156743651_156743879_156744162_156744349_156745007_156745147_156745296_156745374_156751342
transcript_158644.known	chr5	-	4717	20	FSM	ENSG00000056097.16	ENST00000265069.13	4717	20	0	0	0	0	multi-exon	TRUE	canonical	3	546	junction_16	63.6680275219192	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTACTGCATCTTGTTA	-32427933	True	NA	-11	True	AGTAAA	-17	NA	32444740	32354349	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_32355940_32363947_32364046_32364163_32364276_32379114_32379211_32380074_32380173_32385507_32385650_32387548_32387700_32388468_32388675_32390274_32390438_32395158_32395305_32397218_32397339_32400006_32400204_32403105_32403398_32403905_32404098_32406773_32407022_32414968_32415188_32417647_32417793_32419820_32420104_32444228_32444329_32444621
transcript_15865.known	chr1	-	2171	6	FSM	ENSG00000143321.19	ENST00000368209.9	2171	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	535.78376235194	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGGATTCTGACTGATT	-156751769	True	NA	-7	True	AATAAA	-15	NA	156752233	156742109	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156743456_156743651_156743879_156744162_156744349_156745007_156745147_156745296_156745374_156752037
transcript_158657.nic	chr5	-	2556	13	ISM	ENSG00000056097.16	ENST00000265069.13	4717	20	-161	34154	-161	18223	5prime_fragment	FALSE	canonical	3	546	junction_9	59.1867923517476	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGGAGATGATAAGAAAGA	-32444856	True	NA	NA	False	NA	NA	NA	32444901	32388503	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_32388675_32390274_32390438_32395158_32395305_32397218_32397339_32400006_32400204_32403105_32403398_32403905_32404098_32406773_32407022_32414968_32415188_32417647_32417793_32419820_32420104_32444228_32444329_32444621
transcript_15866.known	chr1	-	960	6	FSM	ENSG00000143321.19	ENST00000368206.5	960	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_5	530.589483499249	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGCTCTCCTCTTCTAC	-156752307	True	NA	NA	False	NA	NA	NA	156752448	156743344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_156743456_156743651_156743879_156744162_156744349_156745007_156745147_156745296_156745374_156752228
transcript_158666.nic	chr5	-	1187	7	ISM	ENSG00000056097.16	ENST00000265069.13	4717	20	-31	49706	-31	2671	5prime_fragment	FALSE	canonical	3	546	junction_3	35.8592929223219	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTGCATTGAAAGCCTC	-32444726	False	NA	18	True	TATAAA	-34	NA	32444771	32404055	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_32404098_32406773_32407022_32414968_32415188_32417647_32417793_32419820_32420104_32444228_32444329_32444621
transcript_158670.known	chr5	-	1159	6	FSM	ENSG00000056097.16	ENST00000505366.1	1159	6	0	0	0	0	multi-exon	FALSE	canonical	3	546	junction_2	39.260157921231	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTGGTATTCTAACTCC	-32427931	True	NA	NA	False	NA	NA	NA	32444738	32406726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_32407022_32414968_32415188_32417647_32417793_32419820_32420104_32444228_32444329_32444621
transcript_158677.known	chr5	+	1658	6	FSM	ENSG00000113387.12	ENST00000511615.5	1658	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	1908.65875420411	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAATTATATGTAGCCAG	32555596	True	NA	41	True	NA	NA	NA	32585558	32601988	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_32585626_32588511_32588585_32591562_32591686_32594570_32594873_32598960_32599070_32601004
transcript_158678.known	chr5	+	771	6	FSM	ENSG00000113387.12	ENST00000515355.5	771	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	1966.17069452273	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTGCCCACCACCTAG	32555608	True	NA	-37	True	ATTAAA	-42	NA	32585570	32601282	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_32585626_32586368_32586502_32588511_32588585_32591562_32591686_32598960_32599070_32601004
transcript_158684.known	chr5	+	3449	5	FSM	ENSG00000113387.12	ENST00000265073.9	3449	5	0	0	0	0	multi-exon	FALSE	canonical	3	3694	junction_4	227.03468897946	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTGTGTTATCCCGGTT	32555594	True	NA	13	True	AATAAA	-14	NA	32585556	32604079	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_32585626_32588511_32588585_32591562_32591686_32598960_32599070_32601004
transcript_158686.known	chr5	+	2534	20	FSM	ENSG00000113407.14	ENST00000502553.5	2534	20	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	384.128318530349	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATCTGAGTACTGGAAGT	NA	False	NA	20	True	AATAAA	-17	NA	33440695	33467933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_33440792_33441045_33441144_33445323_33445405_33448540_33448732_33453288_33453413_33454944_33455067_33455586_33455705_33456001_33456067_33456148_33456228_33457256_33457404_33458565_33458665_33459694_33459862_33460901_33461065_33461157_33461296_33461666_33461745_33461905_33462007_33462098_33462204_33463752_33463826_33466870_33466986_33467559
transcript_158693.known	chr5	+	2672	19	FSM	ENSG00000113407.14	ENST00000265112.8	2672	19	0	0	0	0	multi-exon	FALSE	canonical	3	1347	junction_9	156.852450914943	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAGTTTCAAGACTGCTC	33421485	True	NA	13	True	AATAAA	-16	NA	33440964	33468086	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_33441144_33445323_33445405_33448540_33448732_33453288_33453413_33454944_33455067_33455586_33455705_33456001_33456067_33456148_33456228_33457256_33457404_33458565_33458665_33459694_33459862_33460901_33461065_33461157_33461296_33461666_33461745_33461905_33462007_33462098_33462204_33463752_33463826_33466870_33466986_33467559
transcript_158705.known	chr5	+	2481	18	FSM	ENSG00000113407.14	ENST00000508361.5	2481	18	0	0	0	0	multi-exon	FALSE	canonical	2	125	junction_2	380.995835921627	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAAGTTTCAAGACTGCT	33421484	True	NA	12	True	AATAAA	-15	NA	33440963	33468085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_33441144_33445323_33445405_33453288_33453413_33454944_33455067_33455586_33455705_33456001_33456067_33456148_33456228_33457256_33457404_33458565_33458665_33459694_33459862_33460901_33461065_33461157_33461296_33461666_33461745_33461905_33462007_33462098_33462204_33463752_33463826_33466870_33466986_33467559
transcript_158723.known	chr5	-	1003	3	FSM	ENSG00000151388.11	ENST00000515401.1	1003	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	3	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTCGAGTCTCTGCATA	NA	False	NA	NA	False	TATAAA	-15	NA	33892019	33751197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_33751549_33881118_33881481_33891729
transcript_158726.known	chr5	-	1195	6	FSM	ENSG00000242110.8	ENST00000382085.7	1195	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	31.922405924366	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTCAGGACCCCCCAGCA	-34007004	True	NA	-19	True	AATAAA	-1	NA	34008028	33988306	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_33988362_33989110_33989503_33998640_33998828_34004573_34004735_34005755_34005900_34007772
transcript_158727.known	chr5	-	4108	5	FSM	ENSG00000242110.8	ENST00000335606.11	4108	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_4	4.20565096031518	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAATTTATTTACATTTT	-34007026	True	NA	NA	False	AGTAAA	-40	NA	34008050	33986164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_33989503_33998640_33998828_34004573_34004735_34005755_34005900_34007772
transcript_158733.known	chr5	-	2919	4	FSM	ENSG00000242110.8	ENST00000382072.6	2919	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	32.355662392986	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTGGTGTGTGCCTGTA	-34007007	True	NA	NA	False	AATAAA	-20	NA	34008031	33987173	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_33989503_33998640_33998828_34005755_34005900_34007772
transcript_158735.known	chr5	+	4986	18	FSM	ENSG00000039560.14	ENST00000265109.8	4986	18	0	0	0	0	multi-exon	FALSE	canonical	3	555	junction_10	95.3680541058935	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGTGTTGATTTTTGG	34645933	True	NA	17	True	AATAAA	-17	NA	34656327	34832612	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_34656476_34686871_34686956_34757467_34757599_34795938_34796028_34803711_34803777_34807799_34807858_34808583_34808655_34811011_34811119_34811766_34811946_34812179_34812209_34813573_34813661_34814582_34814670_34818796_34818852_34821731_34821851_34822955_34824492_34826329_34826480_34829731_34829798_34830687
transcript_158737.known	chr5	+	5064	18	FSM	ENSG00000039560.14	ENST00000428746.6	5064	18	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	193.411764705882	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGGTGTTGATTTTTG	34656385	False	NA	16	True	AATAAA	-16	NA	34656469	34832611	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_34656697_34686871_34686956_34757467_34757599_34795938_34796028_34803711_34803777_34807799_34807858_34808583_34808655_34811011_34811119_34811766_34811946_34812179_34812209_34813573_34813661_34814582_34814670_34818796_34818852_34821731_34821851_34822955_34824492_34826329_34826480_34829731_34829798_34830687
transcript_158738.known	chr5	+	2941	17	FSM	ENSG00000039560.14	ENST00000512629.5	2941	17	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_10	172.062477297492	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGATTCCTTGGCAGGAC	34646044	False	NA	0	True	NA	NA	NA	34656438	34830765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_34656476_34686871_34686956_34757467_34757599_34795938_34796028_34803711_34803777_34807799_34807858_34808583_34808655_34811011_34811119_34811766_34811946_34812179_34812209_34814582_34814670_34818796_34818852_34821731_34821851_34822955_34824492_34826329_34826480_34829731_34829798_34830687
transcript_158740.nic	chr5	+	2002	15	ISM	ENSG00000039560.14	ENST00000265109.8	4986	18	-170	9134	-170	1645	5prime_fragment	FALSE	canonical	3	555	junction_10	77.9658808160889	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTGAAAGAAATAAAGAGAAA	34656136	False	NA	-34	True	AATAAA	-39	NA	34656157	34823478	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_34656476_34686871_34686956_34757467_34757599_34795938_34796028_34803711_34803777_34807799_34807858_34808583_34808655_34811011_34811119_34811766_34811946_34812179_34812209_34813573_34813661_34814582_34814670_34818796_34818852_34821731_34821851_34822955
transcript_158741.nic	chr5	+	2188	15	ISM	ENSG00000039560.14	ENST00000265109.8	4986	18	-170	8948	-170	1831	5prime_fragment	FALSE	canonical	3	555	junction_10	77.9658808160889	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCATGAAATTAAAAGACACA	34656136	False	NA	NA	False	AAGAAA	-1	NA	34656157	34823664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_34656476_34686871_34686956_34757467_34757599_34795938_34796028_34803711_34803777_34807799_34807858_34808583_34808655_34811011_34811119_34811766_34811946_34812179_34812209_34813573_34813661_34814582_34814670_34818796_34818852_34821731_34821851_34822955
transcript_158743.nic	chr5	+	2533	15	ISM	ENSG00000039560.14	ENST00000265109.8	4986	18	-86	8519	-86	2260	5prime_fragment	FALSE	canonical	3	555	junction_10	77.9658808160889	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGCAATCTTAAGGAACAC	34655320	False	NA	NA	False	AAGAAA	-4	NA	34656241	34824093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_34656476_34686871_34686956_34757467_34757599_34795938_34796028_34803711_34803777_34807799_34807858_34808583_34808655_34811011_34811119_34811766_34811946_34812179_34812209_34813573_34813661_34814582_34814670_34818796_34818852_34821731_34821851_34822955
transcript_158744.nic	chr5	+	2718	15	ISM	ENSG00000039560.14	ENST00000265109.8	4986	18	-104	8352	-104	2427	5prime_fragment	FALSE	canonical	3	555	junction_10	77.9658808160889	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAGGAATCTGTGAAAGA	34655972	False	NA	-64	True	NA	NA	NA	34656223	34824260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_34656476_34686871_34686956_34757467_34757599_34795938_34796028_34803711_34803777_34807799_34807858_34808583_34808655_34811011_34811119_34811766_34811946_34812179_34812209_34813573_34813661_34814582_34814670_34818796_34818852_34821731_34821851_34822955
transcript_158749.nic	chr5	+	1915	14	ISM	ENSG00000039560.14	ENST00000512629.5	2941	17	-281	7287	-170	1645	5prime_fragment	FALSE	canonical	3	119	junction_10	171.857654046708	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTGAAAGAAATAAAGAGAAA	34656136	False	NA	-34	True	AATAAA	-39	NA	34656157	34823478	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_34656476_34686871_34686956_34757467_34757599_34795938_34796028_34803711_34803777_34807799_34807858_34808583_34808655_34811011_34811119_34811766_34811946_34812179_34812209_34814582_34814670_34818796_34818852_34821731_34821851_34822955
transcript_158754.nic	chr5	+	1274	13	ISM	ENSG00000039560.14	ENST00000265109.8	4986	18	-109	13786	-109	-3007	5prime_fragment	FALSE	canonical	3	555	junction_10	77.9342226211024	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGACTAAGTGACAGTAC	34655967	True	NA	NA	False	AAAACA	-3	NA	34656218	34818826	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_34656476_34686871_34686956_34757467_34757599_34795938_34796028_34803711_34803777_34807799_34807858_34808583_34808655_34811011_34811119_34811766_34811946_34812179_34812209_34813573_34813661_34814582_34814670_34818796
transcript_158762.nic	chr5	+	3201	2	ISM	ENSG00000039560.14	ENST00000514931.5	550	3	-108	67969	-25	1616	5prime_fragment	FALSE	canonical	3	656	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAAAAGAATGTCAAAAA	34655840	False	NA	NA	False	AAAACA	-21	NA	34656302	34689899	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_34656476_34686871
transcript_158763.known	chr5	+	550	3	FSM	ENSG00000039560.14	ENST00000514931.5	550	3	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_1	48	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTCGATAAGAAATAGCAT	34646016	True	NA	NA	False	NA	NA	NA	34656410	34757868	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_34656476_34686871_34686956_34757467
transcript_158765.known	chr5	+	1591	10	FSM	ENSG00000113460.13	ENST00000336767.6	1591	10	0	0	0	0	multi-exon	FALSE	canonical	3	1405	junction_9	82.9584158806814	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGGCTGTGTTGAAAGC	34907532	True	NA	NA	False	ATTAAA	-28	NA	34915710	34925996	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_34915898_34918363_34918476_34919839_34919884_34922216_34922288_34922538_34922589_34922694_34922769_34923000_34923052_34923132_34923235_34924846_34924976_34925225
transcript_158777.known	chr5	-	1328	7	FSM	ENSG00000113456.19	ENST00000513914.5	1328	7	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	126.799601296254	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGGGGAAGATAGGAGCAA	-34912832	True	NA	-109	True	NA	NA	NA	34915615	34908654	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_34908949_34909257_34909357_34911553_34911813_34913469_34913579_34913926_34914027_34914694_34914962_34915415
transcript_15878.nic	chr1	-	1258	5	ISM	ENSG00000027869.12	ENST00000368198.7	1599	9	2666	0	-57	0	3prime_fragment	FALSE	canonical	3	23	junction_1	5.61248608016091	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAGTCCTCCAGGCTCCT	NA	False	NA	-9	True	AATAAA	-30	NA	156814168	156806242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_156806574_156807174_156807346_156809202_156809491_156809660_156809808_156813847
transcript_158781.known	chr5	-	4512	6	FSM	ENSG00000113456.19	ENST00000382038.7	4512	6	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_4	54.2217668469038	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGAGTGTATAGTATTTTT	-34912721	True	NA	2	True	AATAAA	-21	NA	34915504	34905259	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_34908949_34909257_34909357_34911553_34911813_34913469_34913579_34914694_34914962_34915415
transcript_158789.known	chr5	-	1153	5	FSM	ENSG00000113456.19	ENST00000325577.8	1153	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	102.255806681088	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATTCAGGACTGTCCTT	-34912765	True	NA	-8	True	AATAAA	-19	NA	34915548	34908553	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_34908949_34909257_34909357_34911553_34911813_34914694_34914962_34915415
transcript_158800.known	chr5	-	1678	3	FSM	ENSG00000113456.19	ENST00000628399.1	1678	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	156.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACGAAGATCGCTTGAGC	NA	False	NA	-97	True	NA	NA	NA	34916769	34913969	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_34914027_34914694_34914962_34915415
transcript_158804.known	chr5	+	6107	12	FSM	ENSG00000168724.17	ENST00000648817.1	6107	12	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_9	37.7812319492537	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGCTTCTGCAGTCTAT	34926631	True	NA	8	True	AATAAA	-18	NA	34929558	34958964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_34929917_34933814_34933909_34935709_34935834_34936143_34936267_34937325_34937631_34938857_34939010_34941095_34941184_34944866_34945026_34945760_34945804_34950169_34950343_34953925_34954002_34954552
transcript_158808.known	chr5	+	2338	12	FSM	ENSG00000168724.17	ENST00000642675.1	2338	12	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	92.6972322105905	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTCCGATTTTAAAAATT	34929933	False	NA	-28	True	AAAAAG	-29	NA	34929976	34955168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_34930362_34933814_34933909_34935709_34935834_34936143_34936267_34937325_34937631_34938857_34939010_34941095_34941184_34944866_34945026_34945760_34945804_34950169_34950343_34953925_34954002_34954552
transcript_158813.known	chr5	-	4918	7	FSM	ENSG00000145626.12	ENST00000274278.8	4918	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	4.72581562625261	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTAGTCTATTGAGTAA	-35991257	True	NA	NA	False	AAAAAG	-14	NA	35991390	35951005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_35954479_35955644_35955865_35957187_35957420_35965385_35965918_35968018_35968134_35988449_35988552_35991146
transcript_158820.known	chr5	-	2342	7	FSM	ENSG00000168671.10	ENST00000282507.8	2342	7	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_3	17.8271017149607	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAATGATTGGCCAAGAGA	-36065542	True	NA	-19	True	AATAAA	-31	NA	36066882	36035020	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_36035975_36037796_36038017_36039476_36039709_36048888_36049421_36051869_36051985_36064248_36064351_36066695
transcript_158822.known	chr5	-	1924	6	FSM	ENSG00000168671.10	ENST00000513300.5	1924	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	53.3389163744447	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCCTCCATGTCCAGACC	-36065542	True	NA	-97	True	NA	NA	NA	36066882	36035336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_36035975_36037796_36038017_36039476_36039709_36048888_36049421_36051869_36051985_36066695
transcript_158825.nic	chr5	-	1242	4	ISM	ENSG00000168671.10	ENST00000515131.1	572	5	392	-724	-10	724	3prime_fragment	FALSE	canonical	3	160	junction_2	10.2089285540757	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTTTATTTTGTGTGAT	-36065552	True	NA	-8	True	ATTAAA	-17	NA	36066892	36048592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_36049421_36051869_36051985_36064248_36064351_36066695
transcript_158828.nnic	chr5	-	1255	3	NNC	ENSG00000168671.10	novel	2342	7	NA	NA	-22	-12773	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	90	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACCCCATCAAAAAGTGGG	-36065564	True	NA	NA	False	AAGAAA	-9	NA	36066904	36062089	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_36063034_36064248_36064351_36066695
transcript_158829.known	chr5	-	8116	18	FSM	ENSG00000164187.7	ENST00000296603.5	8116	18	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_17	5.61572187522947	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTCTTATGTTTGAAAG	-36150986	True	NA	1	True	AATAAA	-26	NA	36151887	36098406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_36104107_36105067_36105198_36108533_36108640_36109944_36109992_36111154_36111259_36114423_36114522_36115014_36115121_36116459_36116594_36117734_36117917_36122279_36122464_36122847_36122962_36124190_36124266_36136308_36136520_36137273_36137442_36141106_36141203_36142501_36142600_36143175_36143407_36151555
transcript_15883.known	chr1	-	1977	5	FSM	ENSG00000253831.3	ENST00000454449.3	1977	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCTGACCACCCCCCC	-157099794	False	NA	NA	False	AATAAA	-19	NA	157099808	157092042	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_157093128_157097867_157097989_157098705_157098896_157099140_157099379_157099465
transcript_158832.nic	chr5	-	2182	14	ISM	ENSG00000164187.7	ENST00000296603.5	8116	18	-50	12749	-50	-2634	5prime_fragment	FALSE	canonical	3	15	junction_13	5.96339921332748	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAGATTTGTCTTTTAAA	-36151036	True	NA	3	True	AATGAA	-22	NA	36151937	36111155	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_36111259_36114423_36114522_36115014_36115121_36116459_36116594_36117734_36117917_36122279_36122464_36122847_36122962_36124190_36124266_36136308_36136520_36137273_36137442_36141106_36141203_36142501_36142600_36143175_36143407_36151555
transcript_158838.known	chr5	-	4011	12	FSM	ENSG00000152620.13	ENST00000381937.9	4011	12	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_11	16.0361162627797	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGATTTCACTTTTTAAT	-36241704	False	NA	NA	False	ATTAAA	-21	NA	36241925	36192588	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_36195283_36197540_36197665_36200226_36200281_36201105_36201162_36207169_36207266_36211843_36211923_36217747_36217885_36219595_36219680_36225541_36225624_36226474_36226564_36227476_36227566_36241498
transcript_158839.known	chr5	-	2507	12	FSM	ENSG00000152620.13	ENST00000282512.7	2507	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_11	26.2480223576168	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGGTTTTGATGTATATC	-36241921	True	NA	0	True	AATAAA	-20	NA	36242142	36193712	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_36195283_36197540_36197665_36200226_36200281_36201105_36201162_36207169_36207266_36211843_36211923_36217747_36217885_36219595_36219680_36225541_36225624_36226474_36226564_36227476_36227566_36242095
transcript_15885.known	chr1	-	1539	4	FSM	ENSG00000117036.12	ENST00000326786.4	1539	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	1.24721912892465	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTTGTGTACTGTACAG	-157138454	False	NA	NA	False	AATAAA	-23	NA	157138474	157133144	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_157134228_157135470_157135709_157136306_157136366_157138315
transcript_158859.known	chr5	+	3715	10	FSM	ENSG00000145604.17	ENST00000274255.11	3715	10	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_9	93.3537014812317	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTACATATGTATACATGTG	36145831	True	NA	NA	False	TTTAAA	-45	NA	36152110	36184319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_36152271_36152770_36153043_36163644_36163757_36166518_36166663_36168312_36168448_36170343_36170443_36171602_36171734_36176964_36177017_36177184_36177293_36181817
transcript_15886.nic	chr1	+	3575	15	NIC	ENSG00000183853.18	novel	7448	15	NA	NA	82	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_8	14.211413923825	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAACAAAAAACAATGAAA	157993190	True	NA	NA	False	NA	NA	NA	157993354	158096051	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_157993729_158076112_158076263_158077990_158078141_158084421_158084580_158086595_158086747_158087754_158087861_158088005_158088155_158088326_158088455_158089453_158089629_158089717_158089819_158091357_158091557_158093338_158093447_158093622_158093763_158094312_158094391_158094643
transcript_158860.known	chr5	+	1537	10	FSM	ENSG00000145604.17	ENST00000274254.9	1537	10	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_9	105.806952092531	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTTGTATTCCTTTTTT	NA	False	NA	27	True	AATAAA	-30	NA	36151988	36184041	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_36152271_36152770_36153043_36163644_36163757_36166518_36166663_36168312_36168448_36170343_36170443_36171602_36171734_36176964_36177017_36177184_36177293_36183839
transcript_158863.known	chr5	+	3299	9	FSM	ENSG00000145604.17	ENST00000620197.5	3299	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	195.372560765323	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACACATTTTTATAAAAATG	36145804	True	NA	-3	True	TTTAAA	-8	NA	36152083	36184011	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_36152271_36152770_36153043_36163644_36163757_36166518_36166663_36170343_36170443_36171602_36171734_36176964_36177017_36177184_36177293_36181817
transcript_158867.known	chr5	+	3294	9	FSM	ENSG00000145604.17	ENST00000677911.1	3294	9	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	184.77418650883	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAACACATTTTTATAA	36145827	True	NA	-8	True	TTTAAA	-3	NA	36152106	36184006	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_36152271_36152770_36153043_36166518_36166663_36168312_36168448_36170343_36170443_36171602_36171734_36176964_36177017_36177184_36177293_36181817
transcript_158871.known	chr5	+	821	5	FSM	ENSG00000145604.17	ENST00000508514.5	821	5	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	253.36041521911	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTTAGAACAGGGAAAATA	36145842	True	NA	NA	False	NA	NA	NA	36152121	36182057	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_36152271_36152770_36153043_36176964_36177017_36177184_36177293_36181817
transcript_158882.nic	chr5	+	4109	12	NIC	ENSG00000079215.15	novel	4227	13	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_5	60.8736667680297	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTGCACGTTGTTGTT	36603442	True	NA	16	True	AATAAA	-23	NA	36606603	36688334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_36606736_36608328_36608605_36629449_36629588_36629942_36630045_36630414_36630501_36671028_36671234_36674048_36674092_36676891_36677185_36679626_36679861_36680394_36680590_36683863_36683999_36686064
transcript_158889.known	chr5	+	4027	11	FSM	ENSG00000079215.15	ENST00000680655.1	4027	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	58.5692752217406	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACATCTTTGCACGTTGT	36603434	True	NA	12	True	AATAAA	-19	NA	36606595	36688330	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_36606736_36608328_36608605_36629449_36629588_36629942_36630045_36671028_36671234_36674048_36674092_36676891_36677185_36679626_36679861_36680394_36680590_36683863_36683999_36686064
transcript_15889.known	chr1	+	7448	15	FSM	ENSG00000183853.18	ENST00000359209.11	7448	15	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_8	12.7158907494135	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTTTTGTGTTATTTAA	157991228	True	NA	NA	False	TATAAA	-21	NA	157993644	158100262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_157993729_158076112_158076263_158077990_158078141_158084421_158084580_158086595_158086747_158087754_158087861_158088005_158088155_158088326_158088455_158089501_158089629_158089717_158089819_158091357_158091557_158093338_158093447_158093622_158093763_158094312_158094391_158094643
transcript_158892.known	chr5	+	3877	10	FSM	ENSG00000079215.15	ENST00000680318.1	3877	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	46.2011169765033	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATCTTTGCACGTTGTT	36596273	True	NA	13	True	AATAAA	-20	NA	36596587	36688331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_36596679_36608328_36608605_36629449_36629588_36671028_36671234_36674048_36674092_36676891_36677185_36679626_36679861_36680394_36680590_36683863_36683999_36686064
transcript_158894.known	chr5	+	3919	10	FSM	ENSG00000079215.15	ENST00000265113.9	3919	10	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_3	25.5429920808907	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTGCACGTTGTTGTT	36603444	True	NA	16	True	AATAAA	-23	NA	36606605	36688334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_36606736_36608328_36608605_36629449_36629588_36671028_36671234_36674048_36674092_36676891_36677185_36679626_36679861_36680394_36680590_36683863_36683999_36686064
transcript_158896.known	chr5	+	3918	9	FSM	ENSG00000079215.15	ENST00000680125.1	3918	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	53.5723809439155	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTAACATCTTTGCACGT	36606150	False	NA	9	True	AATAAA	-16	NA	36606464	36688327	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_36606736_36608328_36608605_36629449_36629588_36671028_36671234_36674048_36674092_36676891_36677185_36679626_36679861_36680394_36680590_36686064
transcript_158900.known	chr5	+	1204	5	FSM	ENSG00000079215.15	ENST00000502864.6	1204	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	69.0448223982074	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGACATGAGGGCACATG	36603434	True	NA	NA	False	NA	NA	NA	36606595	36630962	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_36606736_36608328_36608605_36629449_36629588_36629942_36630045_36630414
transcript_158902.nic	chr5	+	3156	4	NIC	ENSG00000079215.15	novel	784	4	NA	NA	-14	272	intron_retention	TRUE	canonical	3	10	junction_3	8.37987005998436	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTGCTTTGTTTTG	36603420	True	NA	23	True	AATAAA	-24	NA	36606581	36615383	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_36606736_36607223_36607312_36608328_36608605_36612745
transcript_158905.known	chr5	+	1137	3	FSM	ENSG00000079215.15	ENST00000506725.1	1137	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	93.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTGGGACCACAATAGCC	36603455	True	NA	NA	False	NA	NA	NA	36606616	36613487	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_36606736_36608328_36608605_36612745
transcript_158906.known	chr5	+	2368	3	FSM	ENSG00000079215.15	ENST00000681775.1	2368	3	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_2	27.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTTGTGTAATTTTT	36603434	True	NA	NA	False	AAGAAA	-6	NA	36606595	36631401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_36606736_36608328_36608605_36629449
transcript_158908.known	chr5	+	583	3	FSM	ENSG00000079215.15	ENST00000504121.5	583	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	3	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAAAATGGTAGCCTAGG	36603449	True	NA	67	True	NA	NA	NA	36606610	36608698	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_36606736_36607223_36607312_36608328
transcript_158912.known	chr5	+	550	3	FSM	ENSG00000079215.15	ENST00000681776.1	550	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	14	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAGGATGTTAAAAGTTA	36603369	True	NA	-97	True	AAGAAA	-16	NA	36606530	36608534	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_36606736_36607172_36607312_36608328
transcript_158914.known	chr5	+	1096	2	FSM	ENSG00000079215.15	ENST00000512374.1	1096	2	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATAGTTTATTACTTATG	36603449	True	NA	NA	False	AATAAA	-36	NA	36606610	36609299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_36606736_36608328
transcript_158918.nic	chr5	+	4014	12	ISM	ENSG00000164190.19	ENST00000448238.2	8729	46	-44	63620	-23	64	5prime_fragment	FALSE	canonical	2	14	junction_1	12.0631944839261	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTCATCAGTGTCAACG	36876689	False	NA	7	True	NA	NA	NA	36876745	37000570	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_36877179_36953617_36953761_36955471_36955638_36958103_36958232_36961483_36961584_36962122_36962275_36970875_36971037_36971944_36972042_36975775_36976403_36984675_36986302_36995621_36995805_37000372
transcript_158921.nic	chr5	+	2533	10	ISM	ENSG00000164190.19	ENST00000448238.2	8729	46	-44	78989	-23	9304	5prime_fragment	FALSE	canonical	2	14	junction_1	6.40216012928353	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATAGACTGTCTGACA	36876689	False	NA	NA	False	NA	NA	NA	36876745	36985201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_36877179_36953617_36953761_36955471_36955638_36958103_36958232_36961483_36961584_36962122_36962275_36970875_36971037_36971944_36972042_36975775_36976403_36984675
transcript_158922.nic	chr5	+	1502	9	ISM	ENSG00000164190.19	ENST00000448238.2	8729	46	-44	88293	-23	0	5prime_fragment	FALSE	canonical	2	14	junction_1	6.74421048010811	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAGGCAAGGATGAAAAAGA	36876689	False	NA	NA	False	AAGAAA	-26	NA	36876745	36975897	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_36877179_36953617_36953761_36955471_36955638_36958103_36958232_36961483_36961584_36962122_36962275_36970875_36971037_36971944_36972042_36975775
transcript_158924.known	chr5	-	11302	53	FSM	ENSG00000197603.16	ENST00000651892.2	11302	53	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_35	3.55197045072735	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTGATATACTGATTT	-37248936	True	NA	-10	True	AATAAA	-17	NA	37249376	37106234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_37107779_37108292_37108472_37114959_37115050_37120215_37120341_37121616_37121785_37122429_37122489_37125243_37125410_37138719_37138849_37139339_37139371_37142309_37142481_37148180_37148269_37153739_37153994_37157312_37157421_37157669_37157869_37158223_37158346_37162464_37162567_37164272_37164328_37165538_37165672_37167046_37167214_37168790_37169562_37170040_37170332_37173754_37173948_37175908_37175987_37177620_37177701_37179360_37179444_37180016_37180184_37180856_37181006_37182759_37183700_37184787_37185080_37186285_37186395_37187413_37187573_37187732_37187843_37195857_37195997_37198701_37198867_37201590_37201809_37205314_37205455_37206196_37206426_37213558_37213733_37221323_37221489_37224252_37224334_37224531_37224741_37226303_37227074_37227242_37227393_37227567_37227818_37230866_37231050_37238856_37238961_37239712_37239870_37243012_37243120_37244374_37244608_37245478_37245599_37245709_37245846_37247617_37247746_37249244
transcript_158925.known	chr5	+	426	2	FSM	ENSG00000286193.3	ENST00000651145.2	493	2	67	0	16	0	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTCAGACACTATGCT	37248978	True	NA	NA	False	AATAAA	-17	NA	37249045	37250646	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_37249222_37250396
transcript_158930.known	chr5	-	8068	35	FSM	ENSG00000113569.16	ENST00000231498.8	8068	35	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_16	35.7381988652406	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAGTCTTCCATTAAAT	-37355407	True	NA	-6	True	AATAAA	-15	NA	37371106	37288136	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_37292039_37292878_37292986_37294328_37294466_37298867_37298979_37299447_37299569_37301436_37301551_37302778_37302909_37303259_37303415_37304738_37304844_37305056_37305211_37307296_37307433_37309128_37309268_37310551_37310744_37314197_37314329_37317987_37318086_37323991_37324108_37325900_37325968_37327628_37327777_37328357_37328421_37329189_37329279_37330037_37330133_37331684_37331796_37333462_37333634_37337817_37337919_37341089_37341243_37342548_37342647_37348504_37348597_37349171_37349246_37350159_37350266_37351189_37351357_37352736_37352830_37358080_37358152_37363887_37363985_37364246_37364385_37370820
transcript_158932.known	chr5	-	4200	35	FSM	ENSG00000113569.16	ENST00000381843.6	4200	35	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_34	55.3968460621471	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCAGGTGTTCTAAATCT	-37355086	False	NA	-34	True	AATAAA	-18	NA	37370785	37291838	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_37292039_37292878_37292986_37294328_37294466_37298867_37298979_37299447_37299569_37301436_37301551_37302778_37302909_37303259_37303415_37304738_37304844_37305056_37305211_37307296_37307433_37309128_37309268_37310551_37310744_37314197_37314329_37317987_37318086_37323991_37324108_37325900_37325968_37327628_37327777_37328357_37328421_37329189_37329279_37330037_37330133_37331684_37331796_37333462_37333634_37337817_37337919_37341089_37341243_37342548_37342647_37348504_37348597_37349171_37349246_37350159_37350266_37351189_37351357_37352736_37352830_37358080_37358152_37363887_37363985_37364246_37364385_37370665
transcript_158935.nnic	chr5	-	4263	34	NIC	ENSG00000113569.16	novel	8068	35	NA	NA	-34	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_2	53.8565758488889	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCAGGTGTTCTAAATCT	-37355441	True	NA	-34	True	AATAAA	-18	NA	37371140	37291838	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_37292039_37292878_37292986_37298867_37298979_37299447_37299569_37301436_37301551_37302778_37302909_37303259_37303415_37304738_37304844_37305056_37305211_37307296_37307433_37309128_37309268_37310551_37310744_37314197_37314329_37317987_37318086_37323991_37324108_37325900_37325968_37327628_37327777_37328357_37328421_37329189_37329279_37330037_37330133_37331684_37331796_37333462_37333634_37337817_37337919_37341089_37341243_37342548_37342647_37348504_37348597_37349171_37349246_37350159_37350266_37351189_37351357_37352736_37352830_37358080_37358152_37363887_37363985_37364246_37364385_37370820
transcript_158938.nic	chr5	-	2846	24	ISM	ENSG00000113569.16	ENST00000231498.8	8068	35	-34	21076	-34	-8199	5prime_fragment	FALSE	canonical	3	204	junction_5	24.310141644332	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGTTAAGGGAATCATTA	-37355441	True	NA	NA	False	AAAAAG	-4	NA	37371140	37309212	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_37309268_37310551_37310744_37314197_37314329_37317987_37318086_37323991_37324108_37325900_37325968_37327628_37327777_37328357_37328421_37329189_37329279_37330037_37330133_37331684_37331796_37333462_37333634_37337817_37337919_37341089_37341243_37342548_37342647_37348504_37348597_37349171_37349246_37350159_37350266_37351189_37351357_37352736_37352830_37358080_37358152_37363887_37363985_37364246_37364385_37370820
transcript_158947.known	chr5	+	2877	18	FSM	ENSG00000082068.9	ENST00000265107.9	2877	18	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_3	24.126827521006	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTGCTTTAGTGACTA	37374842	True	NA	NA	False	ATTAAA	-16	NA	37379317	37753435	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_37379393_37379488_37379555_37381601_37381686_37391999_37392121_37396374_37396571_37437921_37437982_37443238_37443373_37479833_37479988_37516513_37516591_37605063_37605239_37697654_37697755_37701057_37701143_37702948_37703088_37721114_37721216_37722854_37722935_37724933_37725051_37726882_37727046_37752485
transcript_15895.known	chr1	+	3607	7	FSM	ENSG00000158473.8	ENST00000368171.5	3607	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	13.6585341656986	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTCTTCCTTCAAATAA	158177864	True	NA	NA	False	AATAAA	-20	NA	158178029	158186427	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_158178069_158180818_158181163_158181454_158181722_158182031_158182311_158182877_158183157_158183935_158184036_158184128
transcript_158953.nic	chr5	+	537	5	ISM	ENSG00000082068.9	ENST00000504564.1	1526	12	7	301368	4	14730	5prime_fragment	FALSE	canonical	3	173	junction_3	13.9463256809814	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGAAGAAGAGGAAGAGG	37374816	True	NA	NA	False	AATGAA	-18	NA	37379291	37396539	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_37379393_37379488_37379555_37381601_37381686_37391999_37392121_37396374
transcript_158955.known	chr5	+	365	3	FSM	ENSG00000082068.9	ENST00000505799.1	365	3	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	6.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGGAGGCCAAGGCGGGCA	37374826	True	NA	NA	False	NA	NA	NA	37379301	37381809	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_37379393_37379488_37379555_37381601
transcript_158957.known	chr5	-	4171	3	FSM	ENSG00000168621.15	ENST00000326524.7	4171	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTACTTCTGTACTTC	-37839941	False	NA	-7	True	AATAAA	-17	NA	37840041	37812676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_37816136_37834645_37834823_37839506
transcript_158958.known	chr5	+	3963	23	FSM	ENSG00000164318.18	ENST00000354891.7	3963	23	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	1.69344872819974	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAGAATCATAATCATAAT	NA	False	NA	NA	False	AATAAA	-18	NA	38258408	38464549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_38258852_38337519_38337630_38338697_38338782_38350500_38350619_38352195_38352332_38370295_38370463_38406125_38406242_38406827_38407147_38407804_38407906_38409003_38409105_38412503_38412649_38418065_38418256_38424966_38425093_38427008_38427253_38431176_38431289_38435136_38435254_38438274_38438456_38445678_38445703_38448300_38448380_38451314_38451459_38458310_38458395_38462907_38463012_38463831
transcript_158960.known	chr5	-	10553	20	FSM	ENSG00000113594.10	ENST00000453190.7	10553	20	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_6	8.45650432353471	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTTAGTTTATGTCCT	-38555311	True	NA	NA	False	AATAAA	-26	NA	38556646	38474667	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_38482219_38482588_38482668_38484774_38484869_38485818_38485981_38489077_38489246_38490189_38490292_38493605_38493786_38496381_38496596_38499512_38499584_38502636_38502800_38503975_38504122_38505904_38506075_38506502_38506633_38510463_38510719_38511789_38511965_38523418_38523583_38527154_38527295_38528725_38528841_38530505_38530667_38556333
transcript_158966.known	chr5	-	4345	15	FSM	ENSG00000153071.15	ENST00000320816.11	4345	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_12	9.18544767442457	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTGGTACCATCGGTTT	-39424962	False	221	1	True	AATAAA	-43	NA	39424980	39371676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_39373426_39375013_39375085_39375996_39376107_39376649_39377283_39381453_39381617_39382617_39383272_39388304_39388368_39388798_39388853_39389096_39389124_39389851_39389933_39390443_39390576_39392364_39392464_39393253_39393394_39394229_39394422_39424803
transcript_158971.known	chr5	-	3690	14	FSM	ENSG00000153071.15	ENST00000339788.10	3690	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	11.1869535171146	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATGTGGTACCATCGGTT	-39424962	False	221	0	True	AATAAA	-42	NA	39424980	39371677	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_39373426_39375013_39375085_39375996_39376107_39376649_39377283_39381453_39381617_39388304_39388368_39388798_39388853_39389096_39389124_39389851_39389933_39390443_39390576_39392364_39392464_39393253_39393394_39394229_39394422_39424803
transcript_158972.known	chr5	-	4537	14	FSM	ENSG00000153071.15	ENST00000545653.5	4537	14	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	11.4007162652592	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGTACCATCGGTTTAT	NA	False	NA	3	True	AATAAA	-45	NA	39425233	39371674	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_39373426_39375013_39375085_39375996_39376107_39376649_39377283_39381453_39381617_39382617_39383272_39388798_39388853_39389096_39389124_39389851_39389933_39390443_39390576_39392364_39392464_39393253_39393394_39394229_39394422_39424803
transcript_158975.known	chr5	-	5497	5	FSM	ENSG00000113638.14	ENST00000337702.5	5497	5	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	9.93415824315276	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATGTGTGGACATATGT	-40754982	True	NA	NA	False	AATAAA	-24	NA	40755961	40711575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_40716499_40728344_40728477_40730261_40730344_40746797_40747020_40755823
transcript_158976.known	chr5	-	784	4	FSM	ENSG00000113638.14	ENST00000511730.2	784	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	49.1347353938354	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGTATGCATAGGATTAT	-40754970	True	NA	NA	False	NA	NA	NA	40755949	40716144	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_40716499_40730261_40730344_40746797_40747020_40755823
transcript_158977.known	chr5	-	1707	3	FSM	ENSG00000113638.14	ENST00000503936.6	1707	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	53	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTGTTATTAGAGTGCCA	-40754966	True	NA	NA	False	AATAAA	-7	NA	40755945	40715135	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_40716499_40746797_40747020_40755823
transcript_15898.known	chr1	+	3457	6	FSM	ENSG00000158473.8	ENST00000673701.2	3457	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.3020230031057	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTCTTCCTTCAAATAA	158180862	True	NA	NA	False	AATAAA	-20	NA	158180894	158186427	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_158181163_158181489_158181722_158182031_158182311_158182877_158183157_158183935_158184036_158184128
transcript_158980.known	chr5	-	1918	10	FSM	ENSG00000132356.12	ENST00000354209.7	1918	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	51.8925765998648	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTTATTTCTTTTGCA	NA	False	NA	-8	True	AATAAA	-8	NA	40798374	40762769	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_40763023_40764513_40764641_40764751_40765239_40767465_40767691_40769415_40769504_40771718_40771864_40774927_40774973_40775409_40775504_40777444_40777587_40798062
transcript_158982.known	chr5	-	5088	9	FSM	ENSG00000132356.12	ENST00000397128.7	5254	9	176	-10	-9	10	multi-exon	FALSE	canonical	3	104	junction_7	17.1496173426698	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGTACTTATGTTTTTTA	-40798187	False	NA	1	True	AATAAA	-26	NA	40798198	40759378	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_40763023_40764513_40764641_40764751_40765239_40767465_40767691_40769415_40769504_40771718_40771864_40775409_40775504_40777444_40777587_40798062
transcript_158988.known	chr5	-	668	2	FSM	ENSG00000132356.12	ENST00000511248.1	668	2	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTCCCATTCATGTAT	-40798148	False	NA	NA	False	AATAAA	-2	NA	40798159	40777015	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_40777587_40798062
transcript_158990.nnic	chr5	-	2027	5	NIC	ENSG00000145592.14	novel	7573	4	NA	NA	-11	-1067	combination_of_known_splicesites	FALSE	canonical	3	73	junction_1	5073.52295624056	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACCACGTTCTTGGATAT	-40714354	True	NA	-6	True	AATAAA	-28	NA	40835233	40826328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_40827952_40832441_40832574_40834180_40834266_40834470_40834607_40835182
transcript_158995.known	chr5	-	505	4	FSM	ENSG00000145592.14	ENST00000504562.1	505	4	0	0	0	0	multi-exon	FALSE	canonical	3	647	junction_3	5586.3196192922	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATATCTGGTTTTGGTAA	-40714307	True	NA	-35	True	AATAAA	-19	NA	40835186	40832457	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_40832574_40834180_40834266_40834470_40834607_40835018
transcript_158996.known	chr5	-	7573	4	FSM	ENSG00000145592.14	ENST00000274242.10	7573	4	0	0	0	0	multi-exon	FALSE	canonical	3	8653	junction_3	1841.34859998499	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTACTTTTGCAGCAAATT	-40714343	True	NA	NA	False	AATAAA	-18	NA	40835222	40825261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_40832574_40834180_40834266_40834470_40834607_40835182
transcript_158998.known	chr5	-	3294	17	FSM	ENSG00000083720.13	ENST00000196371.10	3294	17	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_8	14.5021550122732	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCAGTGTGACTGTCCTTT	-41866648	True	NA	-4	True	AATAAA	-18	NA	41870425	41730064	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_41731771_41739389_41739492_41749526_41749608_41762110_41762201_41794002_41794079_41794676_41794750_41801021_41801071_41803068_41803164_41805566_41805682_41807330_41807439_41840450_41840512_41842674_41842782_41850029_41850180_41853418_41853555_41861313_41861405_41862641_41862751_41870280
transcript_159004.nic	chr5	-	1060	8	ISM	ENSG00000083720.13	ENST00000196371.10	3294	17	-181	77294	-181	-57758	5prime_fragment	FALSE	canonical	3	167	junction_2	14.9174599796647	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGGAGAAAAATATGAGAAAA	-41870574	False	NA	NA	False	TATAAA	-1	NA	41870606	41807358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_41807439_41840450_41840512_41842674_41842782_41850029_41850180_41853418_41853555_41861313_41861405_41862641_41862751_41870280
transcript_159007.known	chr5	+	5246	6	FSM	ENSG00000205765.10	ENST00000381647.7	5246	6	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_5	15.8316139417306	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTGCTTGTTTTATATT	41900159	True	NA	4	True	AATAAA	-15	NA	41904343	41921636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_41904468_41907735_41907843_41909745_41909893_41911047_41911180_41912068_41912184_41917015
transcript_159013.known	chr5	+	1655	7	FSM	ENSG00000151876.13	ENST00000281623.8	1655	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	4.57043640026736	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACTGGAATTGCATTTAA	41925175	True	NA	NA	False	AATAAA	-24	NA	41925280	41941743	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_41925499_41927012_41927249_41929696_41929918_41933945_41934022_41934132_41934309_41939440_41939617_41941191
transcript_159016.known	chr5	+	3493	9	FSM	ENSG00000198865.10	ENST00000361970.10	3493	9	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	20.0124960961895	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTGGTACTTTATTTGG	42754115	True	NA	6	True	ATTAAA	-17	NA	42756817	42802439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_42756886_42759119_42759209_42762442_42762549_42769596_42769666_42779457_42779523_42783473_42783577_42796828_42796957_42799374_42799459_42799658
transcript_159023.nic	chr5	+	558	7	ISM	ENSG00000198865.10	ENST00000361970.10	3493	9	-15	5568	-15	-3480	5prime_fragment	FALSE	canonical	3	175	junction_1	22.9812725689612	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGATGGAAATTTCAGAGT	42754100	True	NA	NA	False	ATTAAA	-34	NA	42756802	42796871	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_42756886_42759119_42759209_42762442_42762549_42769596_42769666_42779457_42779523_42783473_42783577_42796828
transcript_159024.nic	chr5	+	618	7	ISM	ENSG00000198865.10	ENST00000361970.10	3493	9	-15	5508	-15	-3420	5prime_fragment	FALSE	canonical	3	175	junction_1	22.9812725689612	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAATAATCAAGCTACAAC	42754100	True	NA	NA	False	AAAAAG	-11	NA	42756802	42796931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_42756886_42759119_42759209_42762442_42762549_42769596_42769666_42779457_42779523_42783473_42783577_42796828
transcript_159025.nic	chr5	+	460	6	ISM	ENSG00000198865.10	ENST00000361970.10	3493	9	-15	18918	-15	-16830	5prime_fragment	FALSE	canonical	3	175	junction_1	25.1714123560836	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAGGGATATAAGAAAGA	42754100	True	NA	20	True	AATATA	-42	NA	42756802	42783521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_42756886_42759119_42759209_42762442_42762549_42769596_42769666_42779457_42779523_42783473
transcript_159029.known	chr5	-	2056	5	FSM	ENSG00000250722.6	ENST00000514985.6	2056	5	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	40.1154583670684	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTTTGTTATGTAGGCT	-42811604	True	NA	1	True	AATAAA	-24	NA	42811892	42799879	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_42801332_42804655_42804774_42806895_42807109_42808150_42808367_42811835
transcript_159031.known	chr5	-	799	3	FSM	ENSG00000250722.6	ENST00000506078.5	799	3	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	4.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTCTGTATGTGTTTGT	-42811604	True	NA	NA	False	NA	NA	NA	42811892	42806582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_42807109_42808150_42808367_42811835
transcript_159032.known	chr5	-	1853	6	FSM	ENSG00000250722.6	ENST00000511224.5	1853	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	76.1193799239064	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTCTTCTAAAACTTGAG	-42811604	True	NA	NA	False	AATAAA	-34	NA	42811892	42800111	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_42801332_42804655_42804774_42806895_42807109_42808150_42808367_42809759_42809789_42811835
transcript_159035.known	chr5	+	2599	8	FSM	ENSG00000172262.12	ENST00000510026.5	2599	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	60.8661965096475	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACACCCATGTGCCTTCT	43120474	True	NA	NA	False	NA	NA	NA	43120917	43175734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_43121124_43122038_43122178_43123208_43123311_43139164_43139310_43161248_43161614_43161708_43161932_43173317_43173449_43174446
transcript_159036.known	chr5	+	2400	8	FSM	ENSG00000172262.12	ENST00000306938.8	2400	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	51.6965241795316	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATCCAC	43119645	True	NA	NA	False	NA	NA	NA	43121539	43175719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_43121569_43122038_43122178_43123208_43123311_43139164_43139310_43161248_43161607_43161708_43161932_43173317_43173449_43174446
transcript_159039.known	chr5	+	3209	8	FSM	ENSG00000172262.12	ENST00000505606.6	3209	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	42.8652373308322	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATGACTCTTTTTTAAAA	43119701	True	NA	23	True	AGTAAA	-16	NA	43121595	43176324	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_43121829_43122038_43122178_43123208_43123311_43139164_43139310_43161248_43161607_43161708_43161932_43173317_43173449_43174446
transcript_159041.known	chr5	+	3286	7	FSM	ENSG00000172262.12	ENST00000682664.1	3286	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	50.3534727920748	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCATGACTCTTTTTTAA	43120470	True	NA	21	True	AGTAAA	-14	NA	43120913	43176322	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_43121124_43122038_43122178_43123208_43123311_43139164_43139310_43161248_43161932_43173317_43173449_43174446
transcript_159044.known	chr5	+	3340	7	FSM	ENSG00000172262.12	ENST00000509634.5	3340	7	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_4	29.4604254325471	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAATATGCTATTTTTTT	43119703	True	NA	16	True	AATAAA	-17	NA	43121597	43176247	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_43122178_43123208_43123311_43139164_43139310_43161248_43161607_43161708_43161932_43173317_43173449_43174446
transcript_159051.nic	chr5	+	704	5	ISM	ENSG00000172262.12	ENST00000515326.5	1050	6	-31	479	-31	0	5prime_fragment	FALSE	canonical	3	28	junction_1	50.0867996581934	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATGAGGCCAAAAAAAGGAA	NA	False	NA	NA	False	AAGAAA	-36	NA	43120851	43161294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_43121124_43122038_43122178_43123208_43123311_43139164_43139310_43161248
transcript_159055.known	chr5	+	572	5	FSM	ENSG00000172262.12	ENST00000509341.5	572	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	55.1741560877917	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATGAGGCCAAAAAAAGGAA	43119789	False	NA	NA	False	AAGAAA	-36	NA	43121683	43161294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_43121829_43122043_43122178_43123208_43123311_43139164_43139310_43161248
transcript_159056.nic	chr5	+	910	4	ISM	ENSG00000172262.12	ENST00000515326.5	1050	6	678	479	21	0	internal_fragment	FALSE	canonical	3	129	junction_2	12.3558353285671	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATGAGGCCAAAAAAAGGAA	43119666	True	NA	NA	False	AAGAAA	-36	NA	43121560	43161294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_43122178_43123208_43123311_43139164_43139310_43161248
transcript_159070.known	chr5	+	1927	2	FSM	ENSG00000172262.12	ENST00000510037.1	1927	2	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGTTTATCATATTGAAT	43122051	False	NA	NA	False	NA	NA	NA	43122088	43125046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_43122178_43123208
transcript_159072.known	chr5	+	501	5	FSM	ENSG00000172262.12	ENST00000508259.5	501	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	61.5589148702282	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATCACTGAGTCATTGC	43119638	True	NA	NA	False	AAAAAG	-22	NA	43121532	43161332	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_43121569_43122043_43122178_43123208_43123311_43139164_43139310_43161248
transcript_159075.known	chr5	-	5350	11	FSM	ENSG00000112972.15	ENST00000325110.11	5350	11	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_10	50.715283692394	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTCTCTCAGGCTCTGT	-43278085	True	NA	-5	True	AATAAA	-15	NA	43313412	43287469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_43291221_43292473_43292638_43292847_43292974_43294055_43294163_43294690_43294862_43295751_43295918_43297001_43297167_43298008_43298135_43298517_43298976_43307765_43307825_43313355
transcript_159083.known	chr5	-	3466	10	FSM	ENSG00000112972.15	ENST00000433297.2	3466	10	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_9	38.4682007525151	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACTTGAGTATTCTTTTT	-43313499	False	NA	-11	True	AATAAA	-20	NA	43313512	43289394	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_43291221_43292473_43292638_43292847_43292974_43294055_43294163_43294690_43294862_43295751_43295918_43297001_43297167_43298008_43298135_43298517_43298976_43313355
transcript_159104.known	chr5	-	1518	3	FSM	ENSG00000151882.11	ENST00000513525.1	1518	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	2	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATTGTTATTTTTCTT	-43396982	True	NA	NA	False	NA	NA	NA	43397264	43380891	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_43382053_43388349_43388477_43397034
transcript_159108.known	chr5	-	1927	4	FSM	ENSG00000151881.15	ENST00000512085.5	1927	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	35.6121078036982	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTAGGAAATTTGCTTTT	-43482552	True	NA	89	True	AATAAA	-1	NA	43483891	43445237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_43446558_43453657_43454044_43454454_43454606_43483821
transcript_159109.known	chr5	-	736	4	FSM	ENSG00000151881.15	ENST00000506860.1	736	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	32.2593655651606	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCTGGCTTTATGTAAT	-43482518	True	NA	NA	False	NA	NA	NA	43483857	43446341	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_43446558_43453657_43454044_43479889_43479988_43483821
transcript_15911.known	chr1	+	3739	9	FSM	ENSG00000162706.13	ENST00000368125.9	3739	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	4.98591766879478	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGTGTGTTCACTTCCT	159171432	True	NA	NA	False	AATATA	-14	NA	159171614	159203313	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_159171854_159191935_159192077_159192577_159192731_159193422_159193561_159193869_159194041_159196363_159196455_159196890_159197061_159199750_159199877_159200803
transcript_159112.known	chr5	-	2736	3	FSM	ENSG00000151881.15	ENST00000397080.8	2736	3	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	10	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGGGTTGTCATAACT	-43482526	True	NA	NA	False	AATAAA	-35	NA	43483865	43444251	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_43446558_43453657_43454044_43483821
transcript_159117.known	chr5	-	2502	13	FSM	ENSG00000172244.9	ENST00000306862.7	2502	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	23.7327422679208	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACGTTTCACATTTAATTC	-43513455	True	NA	-9	True	AATAAA	-15	NA	43515148	43486708	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_43487112_43487908_43487950_43490630_43490730_43492214_43492310_43492719_43492891_43493542_43493613_43494509_43494602_43502371_43502496_43503664_43503761_43505747_43506395_43508576_43508667_43509144_43509376_43514805
transcript_15913.known	chr1	+	2546	10	FSM	ENSG00000162706.13	ENST00000368124.8	2546	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.87094437055125	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTGTTTCCTGCCCAA	159171426	True	NA	19	True	ACTAAA	-16	NA	159171608	159202012	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_159171854_159189770_159189873_159191935_159192077_159192577_159192731_159193422_159193561_159193869_159194041_159196363_159196455_159196890_159197061_159199750_159199877_159200803
transcript_159131.known	chr5	-	2780	11	FSM	ENSG00000172239.14	ENST00000306846.8	2780	11	0	0	0	0	multi-exon	FALSE	canonical	3	734	junction_10	170.854938471207	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGAAGTAGCATCTGGT	-43548130	True	NA	0	True	AATAAA	-25	NA	43557077	43526266	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_43527470_43529785_43529880_43533737_43533793_43534852_43534971_43535533_43535641_43536818_43536945_43538923_43539036_43543003_43543117_43547727_43547914_43555829_43556000_43556581
transcript_159132.known	chr5	-	1734	11	FSM	ENSG00000172239.14	ENST00000436644.6	1734	11	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_10	241.632448152147	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTTGGTTAGATGCTTAT	-43548146	True	NA	1	True	AATAAA	-37	NA	43557093	43527091	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_43527470_43529785_43529880_43533737_43533793_43534852_43534971_43535533_43535641_43536818_43536945_43538923_43539036_43543003_43543117_43547727_43547914_43555829_43556000_43556818
transcript_159133.known	chr5	-	1814	11	FSM	ENSG00000172239.14	ENST00000338972.8	1814	11	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_10	354.449206516251	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGTTGGTTAGATGCTTA	NA	False	NA	0	True	AATAAA	-36	NA	43557695	43527092	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_43527470_43529785_43529880_43533737_43533793_43534852_43534971_43535533_43535641_43536818_43536945_43538923_43539036_43543003_43543117_43547727_43547914_43555829_43556000_43557339
transcript_15915.known	chr1	+	694	3	FSM	ENSG00000158716.9	ENST00000368108.7	694	3	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_1	271	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGTTGCATGGTACTTTA	159772823	True	NA	37	True	AATAAA	-19	NA	159780959	159782543	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_159780994_159781098_159781368_159782152
transcript_159157.nic	chr5	-	1379	7	ISM	ENSG00000172239.14	ENST00000306846.8	2780	11	-137	9335	-121	1252	5prime_fragment	FALSE	canonical	3	734	junction_6	215.300887648477	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGATGGATATGGAAGA	-43557173	False	NA	NA	False	NA	NA	NA	43557214	43535601	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_43535641_43536818_43536945_43538923_43539036_43543003_43543117_43547727_43547914_43555829_43556000_43556581
transcript_159158.nic	chr5	-	1023	7	ISM	ENSG00000172239.14	ENST00000514514.5	1603	10	-18	8489	-2	1252	5prime_fragment	FALSE	canonical	3	463	junction_6	304.323293007069	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGATGGATATGGAAGA	-43548148	True	NA	NA	False	NA	NA	NA	43557095	43535601	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_43535641_43536818_43536945_43538923_43539036_43543003_43543117_43547727_43547914_43555829_43556000_43556818
transcript_15916.known	chr1	+	797	2	FSM	ENSG00000158716.9	ENST00000368107.2	797	2	0	0	0	0	multi-exon	FALSE	canonical	3	837	junction_1	0	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGTTGCATGGTACTTTA	159772825	True	NA	37	True	AATAAA	-19	NA	159780961	159782543	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_159781368_159782152
transcript_159164.known	chr5	+	6483	22	FSM	ENSG00000112992.18	ENST00000264663.9	6483	22	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_1	25.9054621754089	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTTTTACACATTATAT	43601931	True	NA	NA	False	AATAAA	-29	NA	43602722	43707405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_43602891_43609142_43609347_43612907_43613138_43615847_43616066_43619031_43619120_43624031_43624121_43628199_43628388_43644191_43644326_43644610_43644803_43645356_43645511_43649146_43649309_43650476_43650588_43651738_43651885_43653017_43653214_43655839_43656074_43656652_43656814_43659170_43659351_43675510_43675671_43677724_43677807_43700118_43700238_43702620_43702737_43704254
transcript_159167.known	chr5	+	6421	22	FSM	ENSG00000112992.18	ENST00000344920.9	6421	22	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	19.0224834152496	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATGTATAAGTTTTTAC	43602365	True	NA	NA	False	AATAAA	-20	NA	43603179	43707396	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_43603295_43609142_43609347_43612907_43613138_43615847_43616066_43619031_43619120_43624031_43624121_43628199_43628388_43644191_43644326_43644610_43644803_43645356_43645511_43649146_43649309_43650476_43650588_43651738_43651885_43653017_43653214_43655839_43656074_43656652_43656814_43659170_43659351_43675510_43675671_43677724_43677807_43700118_43700238_43702620_43702737_43704254
transcript_15917.known	chr1	-	1375	5	FSM	ENSG00000158710.15	ENST00000368097.9	1375	5	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_4	46.7031851162209	336	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGACTCTGGCTGTGTCTGG	-159920778	True	NA	-5	True	AATAAA	-19	NA	159925507	159918110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_159918942_159919273_159919377_159919660_159919836_159920329_159920538_159925449
transcript_159174.nnic	chr5	-	935	4	NNC	ENSG00000248092.8	novel	4803	3	NA	NA	8	-92	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	3.55902608401044	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATAGAGTCCTAGTCCAT	NA	False	NA	-1	True	ATTAAA	-19	NA	43603168	43571685	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_43571998_43572779_43572912_43583466_43583567_43602777
transcript_159175.known	chr5	-	4803	3	FSM	ENSG00000248092.8	ENST00000513560.7	4803	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	3.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAAAAAGATATAAAATG	-43602735	True	NA	-36	True	NA	NA	NA	43603138	43571593	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_43575936_43583466_43583567_43602777
transcript_159176.known	chr5	-	557	2	FSM	ENSG00000248092.8	ENST00000515466.1	557	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGGTGAAACCCCATCTC	NA	False	NA	NA	False	NA	NA	NA	43603176	43575777	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_43575936_43602777
transcript_159177.known	chr5	-	659	4	FSM	ENSG00000251141.6	ENST00000514597.5	659	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2.16024689946929	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTTATTAACTATCTCA	-44808379	True	NA	NA	False	NA	NA	NA	44808742	44745008	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_44745405_44745941_44746039_44777036_44777102_44808641
transcript_159179.known	chr5	-	468	3	FSM	ENSG00000251141.6	ENST00000505302.1	468	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCATTTACTACATACCA	-44808378	True	NA	NA	False	NA	NA	NA	44808741	44745137	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_44745409_44745941_44746039_44808641
transcript_159192.known	chr5	+	1648	5	FSM	ENSG00000112996.11	ENST00000507110.6	1648	5	0	0	0	0	multi-exon	FALSE	canonical	3	917	junction_3	34.662660024874	335	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAGTAATTAAAAGAACCC	44800267	True	NA	12	True	AATAAA	-17	NA	44808946	44815514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_44809564_44811008_44811155_44811914_44812021_44813105_44813283_44814912
transcript_159196.known	chr5	+	2517	1	FSM	ENSG00000272335.1	ENST00000607056.1	2517	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCTGTGTGTGTGTATG	44826065	False	NA	18	True	AATAAA	-25	NA	44826075	44828592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_44826100_44828600
transcript_159198.known	chr5	-	4202	9	FSM	ENSG00000170571.12	ENST00000303221.10	4202	9	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_5	21.065003560408	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTGCTTCTTTTACTTT	-50435550	True	NA	0	True	AATAAA	-25	NA	50441288	50396191	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_50399291_50399858_50399914_50402285_50402320_50403177_50403455_50405724_50405853_50410876_50410966_50411196_50411384_50428143_50428228_50441039
transcript_159203.nic	chr5	-	1185	6	ISM	ENSG00000170571.12	ENST00000303221.10	4202	9	-182	6997	-120	67	5prime_fragment	FALSE	canonical	3	173	junction_2	25.8426004883409	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCACTCAGGTGGGATTT	NA	False	NA	NA	False	AAGAAA	-3	NA	50441470	50403188	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_50403455_50405724_50405853_50410876_50410966_50411196_50411384_50428143_50428228_50441039
transcript_159205.known	chr5	+	2747	27	FSM	ENSG00000151883.19	ENST00000505697.6	2747	27	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_1	23.2432785983389	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACCACCATTTAATTAAC	NA	False	NA	NA	False	NA	NA	NA	50665898	50842068	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_50666070_50667084_50667187_50668070_50668126_50750150_50750189_50759642_50759733_50760291_50760363_50761820_50761899_50763147_50763243_50778068_50778130_50778559_50778651_50788522_50788590_50794206_50794333_50794852_50795418_50796981_50797033_50797137_50797234_50815431_50815525_50821212_50821339_50822334_50822401_50824907_50824976_50826754_50826804_50827943_50828057_50828311_50828385_50829891_50829962_50832780_50832855_50833978_50834049_50834930_50835016_50841965
transcript_159208.nic	chr5	+	3276	27	NIC	ENSG00000151883.19	novel	7475	26	NA	NA	-66	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	22.1298280594502	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTGTGCTGATATTTT	50666523	False	NA	14	True	AATAAA	-14	NA	50666570	50842341	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_50666998_50667084_50667187_50668070_50668126_50750150_50750189_50759642_50759733_50760291_50760363_50761820_50761899_50763147_50763243_50778068_50778130_50778559_50778651_50788522_50788590_50794206_50794333_50794852_50795418_50796981_50797033_50797137_50797234_50815431_50815525_50821212_50821339_50822334_50822401_50824907_50824976_50826754_50826804_50827943_50828057_50828311_50828385_50829891_50829962_50832780_50832855_50833978_50834049_50834930_50835016_50841965
transcript_159210.known	chr5	+	7475	26	FSM	ENSG00000151883.19	ENST00000281631.10	7475	26	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	20.238418910577	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACGGTATATGTGGGCAGT	50666623	False	NA	NA	False	AATAAA	-19	NA	50666636	50846519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_50667187_50668070_50668126_50750150_50750189_50759642_50759733_50760291_50760363_50761820_50761899_50763147_50763243_50778068_50778130_50778559_50778651_50788522_50788590_50794206_50794333_50794852_50795418_50796981_50797033_50797137_50797234_50815431_50815525_50821212_50821339_50822334_50822401_50824907_50824976_50826754_50826804_50827943_50828057_50828311_50828385_50829891_50829962_50832780_50832855_50833978_50834049_50834930_50835016_50841965
transcript_159211.known	chr5	+	3825	26	FSM	ENSG00000151883.19	ENST00000505554.5	3825	26	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	22.1602888067823	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAAAAATGTATA	50667470	False	NA	-22	True	NA	NA	NA	50667556	50843374	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_50667602_50668070_50668126_50750150_50750189_50759642_50759733_50760291_50760363_50761820_50761899_50763147_50763243_50778068_50778130_50778559_50778651_50788522_50788590_50794206_50794333_50794852_50795418_50796981_50797033_50797137_50797234_50815431_50815525_50821212_50821339_50822334_50822401_50824907_50824976_50826754_50826804_50827943_50828057_50828311_50828385_50829891_50829962_50832780_50832855_50833978_50834049_50834930_50835016_50841965
transcript_159212.known	chr5	+	2829	25	FSM	ENSG00000151883.19	ENST00000514067.6	2829	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	24.2890221545089	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTGTGCTGATATTTT	50666293	False	NA	14	True	AATAAA	-14	NA	50666978	50842341	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_50667187_50668070_50668126_50750150_50750189_50759642_50759733_50760291_50760363_50761820_50761899_50763147_50763243_50778068_50778130_50778559_50778651_50788522_50788590_50794206_50794333_50794852_50795418_50796981_50797033_50797137_50797234_50815431_50815525_50822334_50822401_50824907_50824976_50826754_50826804_50827943_50828057_50828311_50828385_50829891_50829962_50832780_50832855_50833978_50834049_50834930_50835016_50841965
transcript_15923.known	chr1	-	3996	21	FSM	ENSG00000085552.18	ENST00000361509.7	3996	21	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_13	24.6135633340644	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGTGTTATCTGTCT	-159943551	True	NA	-2	True	AATAAA	-17	NA	159945596	159927038	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_159927527_159927759_159927888_159928157_159929019_159929350_159929394_159929637_159929815_159929890_159929976_159930188_159930440_159930691_159930868_159931137_159931262_159931452_159931604_159931811_159931929_159932511_159932653_159934189_159934285_159934424_159934571_159934680_159934823_159936398_159936517_159936753_159936909_159937685_159937839_159942962_159943152_159943396_159943629_159945572
transcript_159231.known	chr5	+	484	2	FSM	ENSG00000151883.19	ENST00000513414.1	484	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTGTATAGAGTTGCT	50666747	False	NA	NA	False	NA	NA	NA	50666760	50668128	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_50667187_50668070
transcript_159232.known	chr5	+	2394	6	FSM	ENSG00000016082.15	ENST00000230658.12	2394	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.489897948556636	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGATCCAGGGTCCCT	51383432	True	NA	NA	False	AATAAA	-26	NA	51383447	51394730	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_51383700_51384540_51384731_51387489_51387750_51389645_51389933_51391273_51391442_51393493
transcript_159233.known	chr5	+	10736	29	FSM	ENSG00000213949.10	ENST00000282588.7	10736	29	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	4.8255273583013	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGATTGCTGTGATTT	52787331	True	NA	NA	False	TTTAAA	-19	NA	52787915	52959209	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_52788415_52849364_52849486_52861446_52861560_52864762_52864852_52864970_52865083_52865689_52865818_52881872_52882022_52887814_52887966_52893674_52893841_52897454_52897529_52898238_52898384_52905762_52905909_52908897_52909042_52910161_52910420_52915463_52915595_52918731_52918899_52920331_52920469_52922776_52922888_52925277_52925488_52927583_52927665_52929624_52929702_52932046_52932137_52933893_52933997_52937400_52937515_52939589_52939692_52939839_52939945_52944942_52945036_52947344_52947462_52952406
transcript_159239.known	chr5	+	4371	3	FSM	ENSG00000152684.11	ENST00000274311.3	4371	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	81.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTCTGTTATCAAGAAT	52787331	True	NA	NA	False	AATAAA	-25	NA	52787915	52804044	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_52788415_52799884_52801121_52801408
transcript_159240.nic	chr5	+	3181	25	ISM	ENSG00000164171.11	ENST00000296585.10	7843	30	-65	14198	-53	-10065	5prime_fragment	FALSE	canonical	1	3	junction_9	4.15310292298287	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCCACTGATGTACCTAA	52988638	True	NA	NA	False	AAGAAA	-2	NA	52989286	53080581	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_52989533_53026747_53026869_53042111_53042222_53045000_53045093_53048362_53048478_53048642_53048771_53051410_53051560_53055537_53055689_53055983_53056150_53058024_53058102_53059873_53060013_53060900_53061047_53062785_53062930_53064911_53065116_53065840_53065978_53067117_53067258_53070108_53070261_53071937_53072049_53072612_53072696_53073117_53073260_53074384_53074478_53075060_53075138_53075220_53075305_53078771_53078875_53080510
transcript_159243.known	chr5	-	4166	7	FSM	ENSG00000164172.20	ENST00000396954.8	4166	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	78.9234861537848	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTATTTTTTAAGAGCT	-53106687	True	NA	2	True	AATAAA	-23	NA	53109757	53095678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_53098668_53100410_53100535_53101358_53101510_53102096_53102225_53107076_53107222_53108521_53108644_53109250
transcript_159244.known	chr5	-	3705	7	FSM	ENSG00000164172.20	ENST00000450852.8	3705	7	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_6	15.334239103682	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTATTTTTTAAGAGCT	-53106687	True	NA	2	True	AATAAA	-23	NA	53109757	53095678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_53098668_53100410_53100535_53101358_53101510_53102096_53102225_53107076_53107222_53108521_53108644_53109711
transcript_159247.known	chr5	+	3137	2	FSM	ENSG00000247796.3	ENST00000499459.2	3137	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATTGTACTTGTTAGT	53109739	True	NA	NA	False	AATAAA	-22	NA	53109898	53115126	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_53110149_53112239
transcript_159249.known	chr5	+	2299	6	FSM	ENSG00000134363.12	ENST00000256759.8	2299	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_4	11.7200682591869	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTCAATTCCTGATGAT	53479941	True	NA	12	True	AATAAA	-38	NA	53480628	53487134	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_53480877_53482879_53483072_53483503_53483723_53484068_53484294_53484996_53485228_53485950
transcript_15925.known	chr1	-	4059	21	FSM	ENSG00000085552.18	ENST00000368094.6	4059	21	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_18	19.4486503387767	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTGTGTGTTATCTGT	-159943568	True	NA	-4	True	AATAAA	-15	NA	159945613	159927040	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_159927527_159927759_159927888_159928157_159929019_159929350_159929394_159929637_159929815_159929890_159929976_159930188_159930440_159930691_159930868_159931137_159931262_159931452_159931604_159931811_159931929_159932511_159932653_159934189_159934333_159934424_159934571_159934680_159934823_159936398_159936517_159936753_159936909_159937685_159937839_159942962_159943152_159943396_159943629_159945572
transcript_159255.known	chr5	+	833	6	FSM	ENSG00000164258.12	ENST00000506974.5	833	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	560.428407559788	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACATTTTGTGGTGTCTA	53552225	True	NA	25	True	AATAAA	-43	NA	53560646	53683338	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_53560761_53603451_53603531_53604723_53604896_53646232_53646406_53658550_53658625_53683117
transcript_159257.known	chr5	+	669	5	FSM	ENSG00000164258.12	ENST00000296684.10	669	5	0	0	0	0	multi-exon	FALSE	canonical	3	1093	junction_4	71.0967650459569	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACATTTTGTGGTGTCTA	53552217	True	NA	25	True	AATAAA	-43	NA	53560638	53683338	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_53560761_53603451_53603531_53646232_53646406_53658550_53658625_53683117
transcript_159258.nic	chr5	+	468	4	ISM	ENSG00000164258.12	ENST00000296684.10	669	5	-22	24716	-16	-167	5prime_fragment	FALSE	canonical	3	1133	junction_2	56.3875478767747	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTATGTTTGGTCTGTTTT	NA	False	NA	NA	False	ACTAAA	-30	NA	53560616	53658622	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_53560761_53603451_53603531_53646232_53646406_53658550
transcript_159259.known	chr5	+	559	4	FSM	ENSG00000164258.12	ENST00000506765.1	559	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	540.795915500683	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACATTTTGTGGTGTCTA	53552253	True	NA	25	True	AATAAA	-43	NA	53560674	53683338	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_53560761_53603451_53603531_53646232_53646406_53683117
transcript_159260.nic	chr5	+	334	3	ISM	ENSG00000164258.12	ENST00000296684.10	669	5	-22	36995	-16	-12446	5prime_fragment	FALSE	canonical	3	1133	junction_2	63	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAGATGGAGTTTGATAC	NA	False	NA	NA	False	AGTAAA	-14	NA	53560616	53646343	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_53560761_53603451_53603531_53646232
transcript_159261.known	chr5	-	2486	6	NNC	ENSG00000185305.12	novel	3328	5	NA	NA	0	-839	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	57.939968933371	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTTCCCTGCAAGTTC	-54309043	True	NA	-5	True	AATAAA	-13	NA	54310573	53884783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_53886708_54067161_54067168_54113201_54113411_54154579_54154640_54171783_54171929_54310431
transcript_159262.known	chr5	-	3328	5	FSM	ENSG00000185305.12	ENST00000504924.6	3328	5	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_2	10.9630059746403	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTTCAGACTAACTCCT	-54309043	True	NA	-30	True	AATAAA	-16	NA	54310573	53883941	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_53886714_54113201_54113411_54154579_54154640_54171783_54171929_54310431
transcript_159266.known	chr5	-	628	4	FSM	ENSG00000185305.12	ENST00000505630.5	628	4	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	7.54247233265651	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGCATGTAATTAGGA	-54309046	True	NA	NA	False	NA	NA	NA	54310576	54113132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_54113411_54154579_54154640_54171783_54171929_54310431
transcript_159270.known	chr5	-	578	5	FSM	ENSG00000185305.12	ENST00000507646.2	578	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	51.3681564785033	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAAGGTAGAAGAT	-54309046	True	NA	NA	False	NA	NA	NA	54310576	53887364	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_53887384_54113201_54113411_54154579_54154640_54171783_54171929_54310431
transcript_159271.known	chr5	+	5223	2	FSM	ENSG00000178996.14	ENST00000381410.5	5223	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTCAATGGAATATAATTA	54515422	True	NA	NA	False	AATAAA	-20	NA	54517758	54546586	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_54519574_54543178
transcript_159274.known	chr5	+	3422	4	FSM	ENSG00000164294.14	ENST00000506123.5	3422	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	70.153799295231	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCAGGCATCACATGAAAG	55156511	True	NA	NA	False	AAAAAG	-22	NA	55160167	55167071	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_55160244_55160329_55160397_55160993_55161256_55164054
transcript_159278.known	chr5	+	3731	3	FSM	ENSG00000164294.14	ENST00000503787.6	3731	3	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_2	9	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCCTGAAAGTTGTATT	55156514	True	NA	6	True	AATAAA	-18	NA	55160170	55167297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_55160397_55160993_55161256_55164054
transcript_159284.known	chr5	+	1036	3	FSM	ENSG00000164294.14	ENST00000515370.1	1036	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	91	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTATATATGTATGCTTG	55156513	True	NA	34	True	AATAAA	-45	NA	55160169	55164754	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_55160244_55160993_55161256_55164054
transcript_159287.known	chr5	+	3245	2	FSM	ENSG00000164294.14	ENST00000296734.6	3245	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCAGGCATCACATGAAAG	55156512	True	NA	NA	False	AAAAAG	-22	NA	55160168	55167071	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_55160397_55164054
transcript_159292.nic	chr5	-	4476	28	NNC	ENSG00000067248.11	novel	4664	27	NA	NA	-6	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	63.6671514427927	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGCTCATCGTTGTG	-55303205	True	NA	-3	True	AATAAA	-17	NA	55307700	55256245	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_55256488_55256490_55256541_55259847_55259945_55261367_55261500_55262629_55262933_55267137_55267232_55267685_55267823_55269412_55269638_55270411_55270488_55270577_55270707_55272086_55272176_55273292_55273378_55274613_55274732_55274865_55275011_55276265_55276407_55277105_55277283_55281371_55281516_55283202_55283812_55285292_55285417_55285695_55285862_55289269_55289429_55290217_55290345_55294016_55294146_55295378_55295525_55296219_55296350_55297284_55297399_55298590_55298665_55307386
transcript_159295.nic	chr5	-	1165	8	ISM	ENSG00000067248.11	ENST00000504778.5	4557	27	9	33034	9	6161	5prime_fragment	FALSE	canonical	3	245	junction_6	22.821400625961	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAGAAAGGTAAAAT	-55303190	True	NA	-13	True	NA	NA	NA	55307685	55289282	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_55289429_55290217_55290345_55294016_55294146_55295378_55295525_55296219_55296350_55297284_55297399_55298590_55298665_55307386
transcript_159297.nic	chr5	-	988	7	ISM	ENSG00000067248.11	ENST00000504778.5	4557	27	-10	34019	-10	5176	5prime_fragment	FALSE	canonical	3	245	junction_5	23.4212628941216	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGCAAGGCCAAAAAGAGG	-55303209	True	NA	NA	False	TTTAAA	-12	NA	55307704	55290267	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_55290345_55294016_55294146_55295378_55295525_55296219_55296350_55297284_55297399_55298590_55298665_55307386
transcript_159298.nic	chr5	-	1104	6	ISM	ENSG00000067248.11	ENST00000504778.5	4557	27	-261	37826	-261	1369	5prime_fragment	FALSE	canonical	3	245	junction_4	25.2158680199592	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAGAAGAAAAGAATGAGA	-55307934	True	NA	NA	False	AGTAAA	-40	NA	55307955	55294074	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_55294146_55295378_55295525_55296219_55296350_55297284_55297399_55298590_55298665_55307386
transcript_159299.nic	chr5	-	777	5	ISM	ENSG00000067248.11	ENST00000504778.5	4557	27	-5	39130	-5	65	5prime_fragment	FALSE	canonical	3	245	junction_3	28.1602556806574	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATTTGAGAATTAAGCAT	-55303204	True	NA	-2	True	AAAACA	-31	NA	55307699	55295378	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_55295525_55296219_55296350_55297284_55297399_55298590_55298665_55307386
transcript_159300.nic	chr5	-	442	3	ISM	ENSG00000067248.11	ENST00000504778.5	4557	27	-1	41091	-1	-1896	5prime_fragment	FALSE	canonical	3	245	junction_1	3	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAAAATAATGACAAAGGAA	-55303200	True	NA	NA	False	CATAAA	-3	NA	55307695	55297339	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_55297399_55298590_55298665_55307386
transcript_159301.known	chr5	-	4450	28	NNC	ENSG00000067248.11	novel	4664	27	NA	NA	20	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	81.7841348844192	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGCTCATCGTTGTG	-55303179	True	NA	-3	True	AATAAA	-17	NA	55307674	55256245	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_55256488_55256490_55256541_55259847_55259945_55261367_55261500_55262629_55262933_55267137_55267232_55267685_55267823_55269412_55269638_55270411_55270488_55270577_55270707_55272086_55272176_55273292_55273378_55274613_55274732_55274865_55275011_55276265_55276407_55277105_55277283_55281371_55281516_55283202_55283812_55285292_55285417_55285695_55285856_55289263_55289429_55290217_55290345_55294016_55294146_55295378_55295525_55296219_55296350_55297284_55297399_55298590_55298665_55307386
transcript_159306.known	chr5	+	3961	27	FSM	ENSG00000039123.16	ENST00000230640.10	3961	27	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_10	68.86171934052	200	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGAATTAGTTTTTTCA	55303789	True	NA	13	True	AATAAA	-14	NA	55307988	55425579	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_55308148_55322326_55322465_55324131_55324199_55327715_55327779_55328698_55328812_55340009_55340185_55341680_55341772_55343330_55343456_55344521_55344621_55345093_55345197_55347012_55347145_55349572_55349653_55350918_55351030_55353167_55353270_55358572_55358699_55366724_55366876_55378313_55378487_55379126_55379196_55387973_55388103_55397415_55397527_55400232_55400422_55405424_55405589_55410523_55410630_55414181_55414239_55415969_55416133_55422877_55422983_55424719
transcript_159319.known	chr5	-	1542	6	FSM	ENSG00000067113.17	ENST00000307259.9	1542	6	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_5	65.092549496851	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACACTTGCAGGCATTTG	-55528535	True	NA	-5	True	ATTAAA	-19	NA	55534964	55424853	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_55425335_55425862_55426040_55441850_55441909_55467868_55468150_55475298_55475451_55534571
transcript_159320.known	chr5	-	1550	6	FSM	ENSG00000067113.17	ENST00000264775.9	1550	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	159.516018004462	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACACTTGCAGGCATTTG	-55528540	True	NA	-5	True	ATTAAA	-19	NA	55534969	55424853	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_55425335_55425862_55426040_55441850_55441909_55467868_55468150_55490959_55491115_55534571
transcript_159327.nic	chr5	-	1533	5	NIC	ENSG00000067113.17	novel	1550	6	NA	NA	-138	0	combination_of_known_junctions	FALSE	canonical	3	100	junction_4	109.474597510107	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACACTTGCAGGCATTTG	NA	False	NA	-5	True	ATTAAA	-19	NA	55535107	55424853	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_55425335_55425862_55426040_55441850_55441909_55467868_55468150_55534571
transcript_159328.nic	chr5	-	1457	5	NIC	ENSG00000067113.17	novel	1550	6	NA	NA	-138	-76	combination_of_known_junctions	FALSE	canonical	3	100	junction_4	109.474597510107	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTATGTAATATGCTTTC	NA	False	NA	-24	True	ATTAAA	-24	NA	55535107	55424929	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_55425335_55425862_55426040_55441850_55441909_55467868_55468150_55534571
transcript_159332.nic	chr5	-	2807	18	NIC	ENSG00000177058.12	novel	2522	16	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_15	48.5772669574144	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTCCTCTTTTATTTCTA	-55709470	True	NA	-3	True	AATAAA	-26	NA	55712340	55625847	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55649206_55649315_55652528_55652724_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55702738_55702895_55704321_55704435_55711451_55711500_55712216
transcript_159338.nic	chr5	-	2651	17	NIC	ENSG00000177058.12	novel	2522	16	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_14	37.3609400811864	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTCCTCTTTTATTTCTA	-55709470	True	NA	-3	True	AATAAA	-26	NA	55712340	55625847	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55649206_55649315_55652528_55652724_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55704321_55704435_55711451_55711500_55712216
transcript_159345.known	chr5	-	2522	16	FSM	ENSG00000177058.12	ENST00000396865.7	2522	16	0	0	0	0	multi-exon	TRUE	canonical	3	97	junction_14	23.3660722701385	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTCCTCTTTTATTTCTA	-55709454	True	NA	-3	True	AATAAA	-26	NA	55712324	55625847	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55649206_55649315_55652528_55652724_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55711451_55711500_55712216
transcript_159358.known	chr5	-	9027	17	FSM	ENSG00000134352.20	ENST00000381298.7	9027	17	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_12	4.1302050493892	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCAGGTAAAGTATTTCT	-55993999	True	NA	NA	False	AATAAA	-20	NA	55994963	55935094	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_55941820_55942669_55942752_55947492_55947590_55951463_55951605_55951928_55952076_55952249_55952352_55954809_55954993_55956024_55956236_55957208_55957292_55960401_55960562_55963351_55963507_55964145_55964313_55968275_55968397_55969549_55969856_55976214_55976294_55982723_55982812_55994783
transcript_159360.known	chr5	-	438	1	FSM	ENSG00000226221.1	ENST00000450941.1	438	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAATCTTATATACAAGCT	-56505060	False	NA	NA	False	AATACA	-33	NA	56505072	56504634	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_56504600_56505100
transcript_159361.known	chr5	+	7036	20	FSM	ENSG00000095015.6	ENST00000399503.4	7036	20	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_1	12.1978155257861	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTACTTTTATTTATT	56813723	True	NA	76	True	AATAAA	-15	NA	56815548	56896152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_56816056_56856599_56856751_56859714_56859916_56864733_56864935_56865339_56865457_56865828_56865978_56871909_56872032_56872640_56872723_56872824_56873006_56875031_56875311_56878979_56879102_56880710_56880803_56881082_56881273_56881569_56882867_56883526_56883680_56884663_56884827_56885931_56886064_56887377_56887521_56888225_56888358_56893530
transcript_159370.known	chr5	-	5198	13	FSM	ENSG00000155545.20	ENST00000381213.7	5198	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	13.390502438503	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGGTTTGTGTGAAT	-56950658	True	NA	-6	True	AATAAA	-16	NA	56952125	56919602	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_56923586_56923690_56923834_56923914_56924043_56928766_56928859_56930663_56930746_56933246_56933399_56935427_56935501_56935665_56935752_56937577_56937699_56938882_56939018_56946925_56947072_56950627_56950653_56952093
transcript_159373.known	chr5	+	1396	6	FSM	ENSG00000155542.12	ENST00000285947.5	1396	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	12.7687117596099	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGTGTCTATGTATAAT	56909292	True	NA	NA	False	AGTAAA	-29	NA	56909595	56917348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_56909744_56911168_56911537_56913010_56913135_56913873_56913990_56914860_56914967_56916814
transcript_159375.nnic	chr5	+	1348	6	NIC	ENSG00000155542.12	novel	1396	6	NA	NA	-14	-166	combination_of_known_splicesites	TRUE	canonical	2	3	junction_1	18.4715998224301	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTCAATTTTTCTTTTG	56909309	True	NA	NA	False	ATTAAA	-24	NA	56909337	56917182	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_56909744_56911308_56911537_56913010_56913135_56913873_56913990_56914860_56914967_56916814
transcript_159376.known	chr5	+	1009	5	FSM	ENSG00000155542.12	ENST00000418299.5	1009	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	20.7062792408487	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGTGTCTATGTATAAT	56909311	True	NA	NA	False	AGTAAA	-29	NA	56909614	56917348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_56909744_56913010_56913135_56913873_56913990_56914860_56914967_56916814
transcript_159377.known	chr5	+	786	5	FSM	ENSG00000155542.12	ENST00000463805.5	786	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	21.1349828483488	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAGGTTTTCTACTCAGC	56909802	True	NA	NA	False	NA	NA	NA	56910059	56916919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_56910395_56913010_56913135_56913873_56913990_56914860_56914967_56916814
transcript_159386.nic	chr5	+	2999	14	NIC	ENSG00000062194.16	novel	4683	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	98	junction_4	333.057434142926	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTCC	57166235	True	NA	20	True	AATAAA	-23	NA	57174058	57263085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_57174212_57175447_57176401_57214073_57214194_57221375_57221397_57230845_57230970_57231097_57231322_57235965_57236033_57237112_57237173_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
transcript_159390.nnic	chr5	+	2898	13	NNC	ENSG00000062194.16	novel	2243	12	NA	NA	-133	0	at_least_one_novel_splicesite	FALSE	canonical	1	98	junction_4	322.211746716693	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTCC	NA	False	NA	20	True	AATAAA	-23	NA	57173814	57263085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_57173927_57175447_57176401_57214073_57214194_57221375_57221397_57230845_57230970_57231097_57231322_57235965_57236033_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
transcript_159394.nnic	chr5	+	2937	13	NNC	ENSG00000062194.16	novel	2243	12	NA	NA	-133	0	at_least_one_novel_splicesite	FALSE	canonical	1	229	junction_7	287.939651759801	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTCC	NA	False	NA	20	True	AATAAA	-23	NA	57173814	57263085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_57173927_57175447_57176401_57214073_57214194_57230845_57230970_57231097_57231322_57235965_57236033_57237112_57237173_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
transcript_159400.nic	chr5	+	2934	13	NIC	ENSG00000062194.16	novel	4683	13	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	1	98	junction_4	311.813902387662	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTCC	57166240	True	NA	20	True	AATAAA	-23	NA	57174063	57263085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_57174212_57175447_57176401_57214073_57214194_57221375_57221397_57230845_57230970_57231097_57231322_57235965_57236033_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
transcript_159403.known	chr5	+	4683	13	FSM	ENSG00000062194.16	ENST00000424459.7	4683	13	0	0	0	0	multi-exon	FALSE	canonical	1	229	junction_7	275.202185775396	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTATTCTATGCATTAAG	57173801	False	NA	15	True	TATAAA	-21	NA	57173947	57264679	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_57174212_57175447_57176401_57214073_57214194_57230845_57230970_57231097_57231322_57235965_57236033_57237112_57237173_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
transcript_159409.nnic	chr5	+	2877	12	NNC	ENSG00000062194.16	novel	2243	12	NA	NA	-133	0	at_least_one_novel_splicesite	FALSE	canonical	1	305	junction_1	234.508312774474	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTCC	NA	False	NA	20	True	AATAAA	-23	NA	57173814	57263085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_57173927_57175447_57176401_57214073_57214194_57230845_57230970_57231097_57231322_57235965_57236033_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
transcript_159413.known	chr5	+	4506	12	FSM	ENSG00000062194.16	ENST00000506184.7	4506	12	0	0	0	0	multi-exon	FALSE	canonical	1	328	junction_10	212.2543305246	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTATGGTTATTCTATGC	57166235	True	NA	9	True	TATAAA	-15	NA	57174058	57264673	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_57174212_57175447_57176401_57214073_57214194_57230845_57230970_57231097_57231322_57235965_57236033_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
transcript_159421.known	chr5	+	3310	11	FSM	ENSG00000062194.16	ENST00000514387.6	3310	11	0	0	0	0	multi-exon	FALSE	canonical	1	61	junction_2	299.252000828733	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTTTTCTGTAGTGTT	57173902	False	NA	21	True	AATAAA	-17	NA	57174048	57263587	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_57174212_57175447_57176401_57230845_57230970_57231097_57231322_57235965_57236033_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
transcript_159435.nnic	chr5	+	1785	7	NNC	ENSG00000062194.16	novel	2243	12	NA	NA	-133	-2995	at_least_one_novel_splicesite	FALSE	canonical	3	305	junction_1	163.079479600184	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTTCTAAATTACCACA	NA	False	NA	NA	False	TATAAA	-37	NA	57173814	57246484	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_57173927_57175447_57176401_57214073_57214194_57230845_57230970_57231097_57231322_57235965_57236033_57246299
transcript_159455.nnic	chr5	+	998	2	NNC	ENSG00000062194.16	novel	2243	12	NA	NA	-133	-61156	at_least_one_novel_splicesite	FALSE	canonical	3	305	junction_1	0	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACAAACTGGAAAATAAAGA	NA	False	NA	NA	False	AATAAA	-3	NA	57173814	57176333	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_57173927_57175447
transcript_159456.nic	chr5	+	1242	2	ISM	ENSG00000062194.16	ENST00000514387.6	3310	11	-193	87254	-92	-61156	5prime_fragment	FALSE	canonical	3	467	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACAAACTGGAAAATAAAGA	57171478	True	NA	NA	False	AATAAA	-3	NA	57173855	57176333	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_57174212_57175447
transcript_159457.known	chr5	-	2786	14	FSM	ENSG00000145632.15	ENST00000274289.8	2786	14	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	18.9202624548643	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGTCTCCTGTCTTTAG	-58456901	True	NA	59	True	AATAAA	-20	NA	58460086	58453981	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_58454775_58454910_58455022_58455284_58455415_58455538_58455780_58456025_58456156_58456491_58456590_58456944_58457093_58457180_58457380_58457487_58457584_58458083_58458172_58458398_58458529_58458724_58458842_58458984_58459093_58459689
transcript_159463.nic	chr5	+	1061	5	NIC	ENSG00000152932.8	novel	423	2	NA	NA	-83	-52	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	27.7623846238035	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCGTACGCATTCAATTCT	58581523	True	NA	0	True	AATAAA	-13	NA	58582137	58851475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_58582415_58617642_58617871_58726001_58726121_58825037_58825163_58851163
transcript_159466.known	chr5	+	8861	5	FSM	ENSG00000152932.8	ENST00000282878.6	8861	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	18.411952639522	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTAGCCTTAGTCTGAT	58582376	True	NA	13	True	AATAAA	-25	NA	58583074	58859394	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_58583233_58617642_58617871_58726001_58726121_58825037_58825163_58851163
transcript_159470.known	chr5	+	391	1	FSM	ENSG00000251306.1	ENST00000509515.1	391	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCTGGCAATGATGACT	NA	False	NA	NA	False	NA	NA	NA	59528860	59529251	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_59528900_59529300
transcript_159477.known	chr5	-	2504	11	FSM	ENSG00000035499.13	ENST00000265036.10	2504	11	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_9	32.9028874112896	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTCGTGTTTCTTTTTTG	-60691618	True	NA	-2	True	AATAAA	-23	NA	60700166	60596911	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_60597915_60599074_60599261_60603390_60603568_60605689_60605857_60638749_60638891_60642811_60642860_60644744_60644876_60645491_60645620_60647397_60647534_60686961_60687228_60700045
transcript_15948.known	chr1	-	2191	8	FSM	ENSG00000162729.14	ENST00000614243.4	2191	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	163.190010698684	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAAGCAGGCTTGGCTG	-160098811	True	NA	NA	False	AATAAA	-9	NA	160098828	160091349	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_160091609_160091807_160091939_160092281_160092696_160092923_160093332_160093709_160094172_160094868_160095247_160098408_160098518_160098798
transcript_159480.known	chr5	-	1569	10	FSM	ENSG00000035499.13	ENST00000453022.6	1569	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	160.758003851967	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATTGCCTTAGTTTTTA	-60691586	True	NA	-19	True	CATAAA	-24	NA	60700134	60597628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_60597915_60603390_60603568_60605689_60605857_60638749_60638891_60642811_60642860_60644744_60644876_60645491_60645620_60647397_60647534_60686961_60687228_60700045
transcript_159488.known	chr5	-	3874	9	FSM	ENSG00000164181.14	ENST00000508821.6	3874	9	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	8.37779804005802	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTGTGTATATTTTTCAT	-60843224	True	NA	-1	True	AATAAA	-19	NA	60844269	60751790	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_60754834_60757508_60757646_60764226_60764333_60766573_60766631_60767822_60767904_60771902_60772094_60787333_60787432_60799179_60799231_60844159
transcript_159491.known	chr5	-	2034	13	FSM	ENSG00000049167.16	ENST00000265038.10	2034	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	46.6374908797156	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATCTGGCTTAAACATGA	-60943302	True	NA	-53	True	NA	NA	NA	60945064	60873884	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_60874684_60887439_60887521_60890888_60891087_60896458_60896516_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60928863_60928960_60944931
transcript_159493.known	chr5	-	9414	12	FSM	ENSG00000049167.16	ENST00000676185.1	9414	12	0	0	0	0	multi-exon	TRUE	canonical	3	89	junction_2	17.2564516621159	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGCCAATAGAACTTTTT	-60943308	True	NA	NA	False	AATAAA	-30	NA	60945070	60866453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_60874684_60887439_60887521_60890888_60891087_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60928863_60928960_60944931
transcript_159501.known	chr5	-	1248	10	FSM	ENSG00000049167.16	ENST00000683199.1	1248	10	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	14.1978958621896	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATAATACTGTGCAACTT	-60943268	True	NA	NA	False	AATGAA	-3	NA	60945030	60890703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_60891087_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60928863_60928960_60944931
transcript_159503.known	chr5	-	2855	10	FSM	ENSG00000049167.16	ENST00000682246.1	2855	10	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	37.2856838776255	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTATCAGCAGGAAAAAAA	-60943302	True	NA	NA	False	AATAAA	-3	NA	60945064	60891687	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_60893644_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60928863_60928960_60944931
transcript_159504.known	chr5	-	881	6	FSM	ENSG00000049167.16	ENST00000675229.1	881	6	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	10.2449987798926	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTGTACTTGTCTCAT	-60943289	True	NA	0	True	ATTAAA	-18	NA	60945051	60903359	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60928863_60928960_60944931
transcript_159508.known	chr5	-	2095	13	FSM	ENSG00000049167.16	ENST00000643034.1	2095	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	43.9686599244912	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTCTGTGTCAACCCACAC	-60943302	True	NA	-1	True	AATAAA	-19	NA	60945064	60873832	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_60874684_60887439_60887521_60890888_60891087_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60924290_60924357_60928863_60928960_60944931
transcript_159509.known	chr5	-	1073	5	FSM	ENSG00000049167.16	ENST00000682418.1	1073	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	52.8695328142778	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTTAGTTTCAGAGCC	-60943302	True	NA	NA	False	NA	NA	NA	60945064	60909339	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_60909958_60918264_60918389_60922053_60922156_60928863_60928960_60944931
transcript_15951.known	chr1	-	2366	7	FSM	ENSG00000162729.14	ENST00000368086.5	2366	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	156.452779528592	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGGCTGTGTCTTCCCT	-160098672	False	NA	NA	False	AATAAA	-19	NA	160098689	160091339	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_160091632_160091807_160091939_160092281_160092696_160092923_160093332_160093709_160094172_160094868_160095247_160098408
transcript_159510.known	chr5	+	632	4	FSM	ENSG00000164182.12	ENST00000296597.10	632	4	0	0	0	0	multi-exon	FALSE	canonical	3	712	junction_2	37.2051370407666	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTTGTATTTTCTGAA	60933894	True	NA	19	True	AATAAA	-16	NA	60945204	61153026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_60945383_61073124_61073215_61098991_61099033_61152703
transcript_159512.known	chr5	+	2211	4	FSM	ENSG00000164182.12	ENST00000678452.1	2211	4	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	308.805224480848	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCATGTGTCTTTATAGTA	60933866	True	NA	NA	False	AATAAA	-8	NA	60945176	61154531	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_60945429_61073124_61073215_61098991_61099033_61152703
transcript_159514.nic	chr5	+	388	3	ISM	ENSG00000164182.12	ENST00000677932.1	4520	4	-88	27045	-42	-27045	5prime_fragment	FALSE	canonical	3	712	junction_2	43.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAAGGAGGATATCATTTA	60933824	True	NA	NA	False	AAGAAA	-29	NA	60945134	61099041	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_60945383_61073124_61073215_61098991
transcript_159515.known	chr5	+	461	3	FSM	ENSG00000164182.12	ENST00000502658.1	461	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	383	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTTGTATTTTCTGAA	60934024	False	NA	19	True	AATAAA	-16	NA	60945334	61153026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_60945383_61073124_61073215_61152703
transcript_159519.known	chr5	+	586	3	FSM	ENSG00000164182.12	ENST00000511107.1	586	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	389.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTTGTATTTTCTGAA	60933896	True	NA	19	True	AATAAA	-16	NA	60945206	61153026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_60945429_61098991_61099033_61152703
transcript_159520.nic	chr5	+	295	2	ISM	ENSG00000164182.12	ENST00000677932.1	4520	4	-88	52915	-42	-52915	5prime_fragment	FALSE	canonical	3	799	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTAGACTATGAAGCAGG	60933824	True	NA	NA	False	AATAAA	-4	NA	60945134	61073171	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_60945383_61073124
transcript_159522.known	chr5	-	584	4	FSM	ENSG00000188725.8	ENST00000507416.1	584	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	241.075829471881	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAAATCATTTGGAAAAT	-61152505	True	NA	46	True	AAAAAG	-32	NA	61162468	61159921	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_61160200_61161087_61161228_61162216_61162360_61162445
transcript_159523.known	chr5	-	2888	3	FSM	ENSG00000188725.8	ENST00000339020.8	2888	3	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_1	17.5	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATAGTATCCATGATAAC	-61152505	True	NA	1	True	AATAAA	-26	NA	61162468	61157703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_61160200_61161087_61161228_61162216
transcript_159527.known	chr5	+	7541	20	FSM	ENSG00000068796.19	ENST00000676271.1	7541	20	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_5	81.8851638296075	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTCACCTTGACTCTTT	62302366	True	NA	8	True	AATAAA	-19	NA	62306451	62391025	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_62306537_62347129_62347225_62348047_62348168_62350065_62350121_62352587_62352654_62353274_62353376_62355158_62355255_62357690_62357746_62358136_62358300_62361241_62361333_62361465_62361530_62362449_62362542_62363177_62363321_62363694_62363900_62365242_62365354_62366413_62366482_62373686_62373838_62377660_62377763_62381117_62381254_62385483
transcript_159529.known	chr5	+	2539	20	FSM	ENSG00000068796.19	ENST00000401507.7	2539	20	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_5	35.7945042904092	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTTGTCCTTCACCTGA	62305964	False	NA	-36	True	NA	NA	NA	62306161	62385676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_62306537_62347129_62347225_62348047_62348168_62350065_62350121_62352587_62352711_62353274_62353376_62355158_62355255_62357690_62357746_62358136_62358300_62361241_62361333_62361465_62361530_62362449_62362542_62363177_62363321_62363694_62363900_62365242_62365354_62366413_62366482_62373686_62373838_62377660_62377763_62381117_62381254_62385483
transcript_159538.known	chr5	-	2831	12	FSM	ENSG00000086189.11	ENST00000199320.9	2831	12	0	0	0	0	multi-exon	TRUE	canonical	3	467	junction_1	30.4375800777877	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTACAGCTGCAAGAAAAC	-62398169	True	NA	NA	False	AATAAA	-16	NA	62403905	62387253	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_62389053_62390875_62390983_62392170_62392235_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62402035_62402123_62403272_62403347_62403693
transcript_159543.known	chr5	-	1468	11	FSM	ENSG00000086189.11	ENST00000679751.1	1468	11	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_9	154.232324757166	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTATTTTGGTTCTC	-62398166	True	NA	-23	True	AGTAAA	-17	NA	62403902	62388526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_62389053_62390875_62390983_62392170_62392235_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62403272_62403347_62403693
transcript_159544.known	chr5	-	1518	11	FSM	ENSG00000086189.11	ENST00000681672.1	1518	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	160.213264120047	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTATTTTGGTTCTC	-62398193	True	NA	-23	True	AGTAAA	-17	NA	62403929	62388526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_62389053_62390875_62390983_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62402035_62402123_62403272_62403347_62403693
transcript_159546.known	chr5	-	1208	11	FSM	ENSG00000086189.11	ENST00000506390.5	1208	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	159.399780426449	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGTTGTGAGCCTCAT	-62398162	True	NA	NA	False	AATAAA	-23	NA	62403898	62391716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_62392007_62392170_62392235_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62402035_62402123_62403272_62403347_62403693
transcript_159549.known	chr5	-	2784	11	FSM	ENSG00000086189.11	ENST00000680785.1	2784	11	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_1	31.9231890637511	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTATTTTGGTTCTC	-62403927	False	NA	-23	True	AGTAAA	-17	NA	62403943	62388526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_62389053_62390875_62392235_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62402035_62402123_62403272_62403347_62403693
transcript_159553.nic	chr5	+	1001	8	ISM	ENSG00000068796.19	ENST00000674632.1	7901	21	-83	33281	-39	2490	5prime_fragment	FALSE	canonical	3	103	junction_5	120.495914064015	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGGCACTTAATGAGCT	NA	False	NA	NA	False	AATAAA	-4	NA	62306122	62357744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_62306537_62347129_62347225_62348047_62348168_62350065_62350121_62352587_62352654_62353274_62353376_62355158_62355255_62357690
transcript_159554.nic	chr5	+	1058	8	ISM	ENSG00000068796.19	ENST00000514082.6	1849	14	-83	6270	-39	2490	5prime_fragment	FALSE	canonical	3	362	junction_5	32.5858364123721	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGGCACTTAATGAGCT	NA	False	NA	NA	False	AATAAA	-4	NA	62306122	62357744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_62306537_62347129_62347225_62348047_62348168_62350065_62350121_62352587_62352711_62353274_62353376_62355158_62355255_62357690
transcript_159559.nic	chr5	+	808	7	ISM	ENSG00000068796.19	ENST00000514082.6	1849	14	40	8833	-5	-73	5prime_fragment	FALSE	canonical	3	362	junction_5	35.0666032952533	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGAAATTATGTGTATGA	62304407	True	NA	NA	False	NA	NA	NA	62306245	62355181	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_62306537_62347129_62347225_62348047_62348168_62350065_62350121_62352587_62352711_62353274_62353376_62355158
transcript_15956.known	chr1	-	2270	7	FSM	ENSG00000162729.14	ENST00000314485.12	2270	7	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_5	60.8677984560711	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGCTTGGCTGTGTCTTC	-160095800	True	NA	NA	False	AATAAA	-16	NA	160098619	160091342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_160091609_160091807_160091939_160092281_160092696_160092923_160093332_160093709_160094172_160094868_160095247_160098408
transcript_159561.nic	chr5	+	800	6	ISM	ENSG00000068796.19	ENST00000674632.1	7901	21	-83	37701	-39	303	5prime_fragment	FALSE	canonical	3	103	junction_5	140.167043202031	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGAGAGAAAAGGAGATTGCA	NA	False	NA	28	True	AAGAAA	-3	NA	62306122	62353324	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_62306537_62347129_62347225_62348047_62348168_62350065_62350121_62352587_62352654_62353274
transcript_159563.known	chr5	+	1787	6	FSM	ENSG00000068796.19	ENST00000675085.1	1787	6	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_5	38.410415254199	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATTATTTCCTAGAAGAA	62304367	True	NA	NA	False	NA	NA	NA	62306205	62354337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_62306537_62347129_62347225_62348047_62348168_62350065_62350121_62352587_62352711_62353274
transcript_159565.known	chr5	+	1035	5	FSM	ENSG00000068796.19	ENST00000504883.2	1035	5	0	0	0	0	multi-exon	FALSE	canonical	3	434	junction_2	15.2704780540755	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTGTGTTTCTAAACCAA	62304367	True	NA	NA	False	ATTAAA	-2	NA	62306205	62353021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_62306537_62347129_62347225_62348047_62348168_62350065_62350121_62352587
transcript_159566.known	chr5	-	2989	5	FSM	ENSG00000086189.11	ENST00000680836.1	2989	5	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_1	16.4012194668567	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTCTTCAGTTAATAAT	-62398157	True	NA	NA	False	NA	NA	NA	62403893	62396173	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_62398740_62398819_62398882_62402035_62402123_62403272_62403347_62403693
transcript_159568.known	chr5	-	1581	12	FSM	ENSG00000086189.11	ENST00000681192.1	1581	12	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_11	150.00550954069	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTATTTTGGTTCTC	-62398166	True	NA	-23	True	AGTAAA	-17	NA	62403902	62388526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_62389053_62390875_62390983_62392170_62392235_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62402035_62402123_62403272_62403347_62403667
transcript_159571.known	chr5	+	4365	30	FSM	ENSG00000086200.17	ENST00000325324.11	4365	30	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_5	26.7330574658873	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGACTGATTTGTCTGA	62404123	True	NA	13	True	ATTAAA	-19	NA	62412762	62628582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_62412930_62437273_62437418_62442982_62443084_62449926_62450000_62451729_62451934_62467130_62467264_62470249_62470309_62474415_62474465_62476682_62476754_62483100_62483294_62484009_62484163_62485418_62485463_62487770_62487862_62489301_62489350_62490114_62490221_62493997_62494125_62504666_62504701_62504857_62504899_62506240_62506358_62515387_62515502_62526141_62526258_62530708_62530786_62536701_62536782_62537208_62537290_62550366_62550463_62551222_62551337_62561135_62561258_62591576_62591673_62601763_62601849_62627153
transcript_159579.known	chr5	-	4572	1	FSM	ENSG00000178394.5	ENST00000323865.5	4572	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCCTGATGCTTTCTTT	NA	False	NA	0	True	AATAAA	-20	NA	63962445	63957873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_63957900_63962400
transcript_159580.known	chr5	+	4945	8	FSM	ENSG00000164197.12	ENST00000389100.9	4945	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	1.8405855323893	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGGAATATGATACTTGT	64165656	True	NA	NA	False	AATAAA	-20	NA	64165842	64372869	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_64165954_64200807_64200943_64212064_64212161_64213557_64214518_64217360_64217397_64325185_64325412_64330280_64330407_64369614
transcript_159582.known	chr5	+	1727	5	FSM	ENSG00000164197.12	ENST00000296615.10	1727	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	1.6583123951777	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAATTAAAAAAA	64165657	True	NA	NA	False	NA	NA	NA	64165843	64217786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_64165954_64200807_64200943_64212064_64212161_64213557_64214518_64217360
transcript_159583.known	chr5	+	4451	6	FSM	ENSG00000186479.5	ENST00000334025.3	4451	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6.41872261435249	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAAAATTCTGTCCG	64505939	True	NA	NA	False	AAAACA	-19	NA	64506014	64612319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_64506790_64507710_64507878_64575773_64575905_64594709_64594858_64598364_64598436_64609160
transcript_159594.known	chr5	-	6878	5	FSM	ENSG00000153006.16	ENST00000513458.9	6878	5	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_4	40.4745290275254	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGCTGTGTCTTGCTTTG	-64764713	True	NA	-3	True	AATAAA	-42	NA	64768691	64718147	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_64724574_64728106_64728180_64741056_64741201_64754314_64754363_64768504
transcript_159600.known	chr5	+	612	4	FSM	ENSG00000145642.12	ENST00000506473.5	612	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	84.8384084925899	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGATGATATAATTCAAGAA	64688989	True	NA	NA	False	AATGAA	-14	NA	64690531	64717963	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_64690815_64694086_64694183_64695506_64695665_64717888
transcript_159604.known	chr5	-	392	4	FSM	ENSG00000153006.16	ENST00000510616.5	392	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	170.184866803394	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCAATATTTTTTTCCA	-64764649	True	NA	NA	False	AATAAA	-23	NA	64768627	64741056	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_64741201_64754314_64754363_64765044_64765122_64768504
transcript_159605.known	chr5	+	772	3	FSM	ENSG00000145642.12	ENST00000389074.6	772	3	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	31	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTTTTCCTTTGTATA	64688960	True	NA	119	True	ATTAAA	-16	NA	64690502	64718190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_64690815_64695506_64695665_64717888
transcript_159606.known	chr5	+	637	3	FSM	ENSG00000145642.12	ENST00000512767.5	637	3	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	94.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAATCCACATTGCTTAT	64691177	False	NA	-72	True	AAGAAA	-16	NA	64691240	64717999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_64691609_64695506_64695665_64717888
transcript_159607.known	chr5	+	532	3	FSM	ENSG00000145642.12	ENST00000513930.1	532	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	92.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGAAACGGTTTGTAATA	64691255	False	NA	11	True	AATAAA	-13	NA	64691318	64718082	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_64691499_64695506_64695665_64717888
transcript_159608.nic	chr5	-	417	3	ISM	ENSG00000153006.16	ENST00000495198.6	816	4	-110	13386	-38	0	5prime_fragment	FALSE	canonical	3	278	junction_2	53	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCAATATTTTTTTCCA	NA	False	NA	NA	False	AATAAA	-23	NA	64768729	64741056	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_64741201_64754314_64754363_64768504
transcript_159609.known	chr5	+	2065	14	FSM	ENSG00000153015.17	ENST00000381070.8	2065	14	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_6	54.634666152198	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATAAATATGGATGGGG	64763152	True	NA	NA	False	AATAAA	-20	NA	64768929	65018750	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_64769189_64774690_64774788_64781920_64782034_64783835_64783980_64785480_64785580_64786523_64786628_64788950_64789021_64800247_64800328_64801301_64801333_64804228_64804387_64885442_64885547_64971702_64971813_64977134_64977239_65018158
transcript_159613.known	chr5	+	2103	11	FSM	ENSG00000153015.17	ENST00000508024.2	3867	11	28	1736	0	22	multi-exon	FALSE	canonical	2	3	junction_10	168.895707464696	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTTCTCCTCTGGATCT	64763168	True	NA	4	True	AATAAA	-16	NA	64768945	64808562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_64769189_64774690_64774788_64781920_64782034_64783835_64783980_64785480_64785580_64786523_64786628_64788950_64789021_64800247_64800328_64801301_64801333_64804228_64804387_64807598
transcript_159614.nic	chr5	+	1368	11	ISM	ENSG00000153015.17	ENST00000692763.1	7794	12	-163	14993	-137	-14993	5prime_fragment	FALSE	canonical	3	399	junction_6	57.3697655564322	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAGAAAATGCAGCAAAACA	64768764	True	NA	NA	False	ATTAAA	-32	NA	64768780	64885506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_64769189_64774690_64774788_64781920_64782034_64783835_64783980_64785480_64785580_64786523_64786628_64788950_64789021_64800247_64800328_64801301_64801333_64804228_64804387_64885442
transcript_159616.nic	chr5	+	1236	10	ISM	ENSG00000153015.17	ENST00000485990.2	1181	12	2415	-8	-135	8	3prime_fragment	FALSE	canonical	3	399	junction_6	60.2398498186445	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACACAAGTGCGAATGTTA	64768766	True	NA	31	True	ATTAAA	-4	NA	64768782	64804320	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_64769189_64774690_64774788_64781920_64782034_64783835_64783980_64785480_64785580_64786523_64786628_64788950_64789021_64800247_64800328_64801301_64801333_64804228
transcript_159619.nic	chr5	+	983	6	FSM	ENSG00000153015.17	ENST00000688564.1	1917	6	-224	1158	-202	401	multi-exon	FALSE	canonical	3	486	junction_5	46.2834743726095	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAACCAGAGGAGGAAGT	NA	False	NA	-43	True	ATTAAA	-13	NA	64768715	64786580	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_64769189_64774690_64774788_64781920_64782034_64783835_64783980_64785480_64785580_64786523
transcript_159620.nic	chr5	+	704	5	FSM	ENSG00000153015.17	ENST00000693571.1	1312	5	0	608	0	-604	multi-exon	FALSE	canonical	3	525	junction_3	33.3354166015666	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTGAGGTAGGAGCATGA	64763152	True	NA	NA	False	AATAAA	-3	NA	64768929	64785571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_64769189_64774690_64774788_64781920_64782034_64783835_64783980_64785480
transcript_159623.known	chr5	-	1586	11	FSM	ENSG00000123219.13	ENST00000508421.5	1586	11	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_9	92.7028047040649	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTAATCCTCTGTGAAT	-65560025	True	NA	-60	True	NA	NA	NA	65563125	65517819	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_65518634_65521474_65521529_65528451_65528579_65528918_65529018_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65554796_65554899_65561462_65561565_65563097
transcript_159624.known	chr5	-	1731	11	FSM	ENSG00000123219.13	ENST00000396679.6	1731	11	0	0	0	0	multi-exon	TRUE	canonical	3	183	junction_9	50.0260931914536	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTAGTGATGTGGGATA	-65560068	True	NA	-6	True	AATAAA	-21	NA	65563168	65517765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_65518634_65521474_65521529_65528451_65528579_65528918_65529018_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65554796_65554947_65561462_65561565_65563097
transcript_159625.known	chr5	-	1697	11	FSM	ENSG00000123219.13	ENST00000514814.5	1697	11	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_9	83.1724112912449	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTAGTGATGTGGGATA	-65560068	True	NA	-6	True	AATAAA	-21	NA	65563168	65517765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_65518634_65521474_65521529_65528451_65528579_65528918_65529018_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65554796_65554947_65561496_65561565_65563097
transcript_159627.nnic	chr5	-	1604	10	NIC	ENSG00000123219.13	novel	1731	11	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_8	104.061354171944	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTATTAGTGATGTGGGAT	-65560092	True	NA	-7	True	AATAAA	-20	NA	65563192	65517766	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_65518634_65521474_65521529_65528451_65528579_65528918_65529018_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65561462_65561565_65563097
transcript_159629.known	chr5	-	1040	10	FSM	ENSG00000123219.13	ENST00000510693.5	1040	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	106.889812885819	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATCTATTATTCATTTTT	-65560045	True	NA	NA	False	NA	NA	NA	65563145	65518334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_65518634_65521474_65521529_65528451_65528579_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65554796_65554947_65561462_65561565_65563097
transcript_15963.nic	chr1	-	2548	6	NIC	ENSG00000162729.14	novel	2270	7	NA	NA	20	0	intron_retention	FALSE	canonical	3	377	junction_4	61.2751172989493	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGCTTGGCTGTGTCTTC	-160098652	False	NA	NA	False	AATAAA	-16	NA	160098669	160091342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_160091609_160091807_160091939_160092281_160093332_160093709_160094172_160094868_160095247_160098408
transcript_159633.known	chr5	-	653	9	FSM	ENSG00000123219.13	ENST00000515497.5	653	9	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_7	109.444549316081	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTTGAGTACCTTGGGC	-65560068	True	NA	NA	False	TATAAA	-15	NA	65563168	65528525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_65528579_65528918_65529018_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65554796_65554899_65561496_65561565_65563097
transcript_159634.nic	chr5	-	821	9	ISM	ENSG00000123219.13	ENST00000396679.6	1731	11	-24	10698	-24	0	5prime_fragment	FALSE	canonical	3	183	junction_7	55.4137843861976	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAAAAGGTAAGTTT	-65560092	True	NA	NA	False	NA	NA	NA	65563192	65528463	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_65528579_65528918_65529018_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65554796_65554947_65561462_65561565_65563097
transcript_159648.known	chr5	-	634	2	FSM	ENSG00000123219.13	ENST00000504508.1	634	2	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGATTTAAACCTGTAT	-65560036	True	NA	NA	False	TTTAAA	-6	NA	65563136	65560969	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_65561565_65563097
transcript_159653.known	chr5	+	2019	12	FSM	ENSG00000113593.12	ENST00000510930.5	2019	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	159.183920862495	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATACAATATTAA	65558234	True	NA	-81	True	AGTAAA	-26	NA	65563295	65587422	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_65563507_65563802_65563840_65567512_65567616_65569631_65569733_65569877_65569999_65571838_65572287_65576878_65577070_65579423_65579614_65583037_65583220_65585013_65585096_65585998_65586182_65587252
transcript_159657.known	chr5	+	2109	11	FSM	ENSG00000113593.12	ENST00000261308.10	2109	11	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_4	69.0189104521362	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGACTTTTCTCGCAAT	65558234	True	NA	26	True	ATTAAA	-20	NA	65563295	65587549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_65563507_65567512_65567616_65569631_65569733_65569877_65569999_65571838_65572287_65576878_65577070_65579423_65579614_65583037_65583220_65585013_65585096_65585998_65586182_65587252
transcript_159665.nic	chr5	+	4202	14	NIC	ENSG00000123213.23	novel	8652	13	NA	NA	-40	1359	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	323.773461602198	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTCATATTTCTTTCAT	65708473	True	NA	NA	False	AATAAA	-23	NA	65722164	65824687	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_65722415_65740894_65741001_65758566_65758827_65762959_65763109_65777426_65777535_65780178_65780282_65781260_65781422_65785774_65785911_65788117_65788485_65792453_65792656_65809514_65809702_65810036_65810166_65812254_65812392_65822780
transcript_15967.nic	chr1	-	3245	5	NIC	ENSG00000162729.14	novel	2270	7	NA	NA	20	0	intron_retention	FALSE	canonical	3	394	junction_4	55.2743159161649	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGCTTGGCTGTGTCTTC	-160098652	False	NA	NA	False	AATAAA	-16	NA	160098669	160091342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_160091609_160091807_160091939_160092281_160093332_160093709_160095247_160098408
transcript_159674.nic	chr5	+	4015	13	NIC	ENSG00000123213.23	novel	8652	13	NA	NA	-13	1359	combination_of_known_junctions	FALSE	canonical	3	75	junction_9	238.90368817208	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTCATATTTCTTTCAT	65708500	True	NA	NA	False	AATAAA	-23	NA	65722191	65824687	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_65722415_65758566_65758827_65762959_65763109_65777426_65777535_65780178_65780282_65781260_65781422_65785774_65785911_65788117_65788485_65792453_65792602_65809514_65809702_65810036_65810166_65812254_65812392_65822780
transcript_159675.known	chr5	+	8652	13	FSM	ENSG00000123213.23	ENST00000380985.10	8652	13	0	0	0	0	multi-exon	FALSE	canonical	3	784	junction_3	60.165512454303	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGTTATAAAGATGCC	65708513	True	NA	NA	False	AATAAA	-20	NA	65722204	65829283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_65722415_65758566_65758827_65762959_65763109_65777426_65777535_65780178_65780282_65781260_65781422_65785774_65785911_65788117_65788485_65792453_65792656_65809514_65809702_65810036_65810166_65812254_65812392_65822780
transcript_15969.known	chr1	+	5435	23	FSM	ENSG00000018625.15	ENST00000361216.8	5435	23	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_7	7.79078179592623	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATCTCTTCCATAATTCA	160113128	True	NA	NA	False	AATAAA	-26	NA	160115758	160143591	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_160115874_160120905_160121011_160121191_160121252_160123212_160123417_160123942_160124057_160124295_160124431_160125135_160125254_160127551_160127821_160128651_160128851_160128979_160129090_160129265_160129401_160130101_160130292_160130421_160130598_160134483_160134621_160135144_160135296_160135433_160135603_160135838_160135994_160136246_160136371_160136569_160136716_160136900_160137032_160139639_160139742_160139892_160139985_160141293
transcript_159691.known	chr5	+	8354	12	FSM	ENSG00000123213.23	ENST00000502464.5	8354	12	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	254.50071035313	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGTTATAAAGATGCC	65708551	True	NA	NA	False	AATAAA	-20	NA	65722242	65829283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_65722415_65762959_65763109_65777426_65777535_65780178_65780282_65781260_65781422_65785774_65785911_65788117_65788485_65792453_65792656_65809514_65809702_65810036_65810166_65812254_65812392_65822780
transcript_159702.known	chr5	+	2637	9	FSM	ENSG00000123213.23	ENST00000506539.5	2637	9	0	0	0	0	multi-exon	FALSE	canonical	3	784	junction_3	56.3909345551215	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACCCAAAAAACTGATAGT	65708566	True	NA	NA	False	AAAAAG	-5	NA	65722257	65793649	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_65722415_65758566_65758827_65762959_65763109_65777426_65777535_65780178_65780282_65781260_65781422_65785774_65785911_65788117_65788485_65792453
transcript_159703.known	chr5	+	1437	13	FSM	ENSG00000113597.18	ENST00000438419.6	1437	13	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_7	41.6842462914815	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGATTTTATCTTGTAA	65623833	True	NA	6	True	ATTAAA	-16	NA	65625033	65664764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_65625107_65635300_65635370_65635943_65636044_65637695_65637781_65647054_65647183_65650809_65650883_65652500_65652546_65655635_65655654_65658367_65658502_65660698_65660898_65662049_65662151_65664233_65664385_65664503
transcript_159706.known	chr5	+	2910	13	FSM	ENSG00000113597.18	ENST00000399438.8	2910	13	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_7	38.3525314244923	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCTCTATATTTTAATTA	65623826	True	NA	122	True	AGTAAA	-18	NA	65625026	65666233	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_65625107_65635300_65635370_65635943_65636044_65637695_65637781_65647054_65647183_65650809_65650883_65652500_65652546_65655635_65655654_65658367_65658502_65660698_65660898_65662049_65662151_65664236_65664385_65664503
transcript_15971.known	chr1	+	1878	11	FSM	ENSG00000143318.13	ENST00000368078.8	1878	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2.02237484161567	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTATTTTGGTGAAGT	160190545	False	NA	NA	False	AATAAA	-21	NA	160190574	160201886	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_160191031_160192801_160192887_160193746_160193848_160195011_160195124_160195460_160195535_160195896_160196028_160197568_160197615_160198676_160198732_160198952_160199054_160199850_160199926_160201244
transcript_159712.known	chr5	+	1410	12	FSM	ENSG00000113597.18	ENST00000505553.5	1410	12	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_10	28.9430903557109	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATTTTATCTTGTAATT	65623844	True	NA	8	True	ATTAAA	-18	NA	65625044	65664766	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_65625107_65635300_65635370_65635943_65636044_65637695_65637781_65647054_65647183_65650809_65650883_65652500_65652546_65658367_65658502_65660698_65660898_65662049_65662151_65664233_65664385_65664503
transcript_159716.known	chr5	+	2715	12	FSM	ENSG00000113597.18	ENST00000231526.8	2715	12	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_7	21.3382828280437	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAAGTCTGTCTTTGTTTC	65623839	True	NA	6	True	AATAAA	-18	NA	65625039	65666069	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_65625107_65635300_65635370_65635943_65636044_65637695_65637781_65647054_65647183_65650809_65650883_65652500_65652546_65658367_65658502_65660698_65660898_65662049_65662151_65664236_65664385_65664503
transcript_159725.known	chr5	-	3863	11	FSM	ENSG00000113595.15	ENST00000231524.14	3863	11	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	8.15107354892593	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAGAAGTCCCATCAT	-65622998	True	NA	-18	True	AATAAA	-13	NA	65624333	65589689	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_65591949_65594520_65594646_65596420_65596532_65597050_65597181_65604910_65605046_65609242_65609459_65610860_65611044_65611602_65611882_65614097_65614220_65618092_65618256_65624193
transcript_159733.known	chr5	-	5448	11	FSM	ENSG00000197860.10	ENST00000381007.9	5448	11	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	7.0774289116882	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTATTTGATTTAATG	-65718972	True	NA	0	True	AATAAA	-23	NA	65722109	65665927	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_65670358_65671914_65671999_65672243_65672282_65680493_65680557_65680655_65680795_65685367_65685473_65704278_65704379_65708488_65708559_65712960_65713065_65720707_65720830_65721916
transcript_159737.known	chr5	+	1541	2	FSM	ENSG00000253251.3	ENST00000510585.3	1541	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAGTTAGTGCTAATTAT	65623826	True	NA	NA	False	AATACA	-17	NA	65625026	65630928	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_65625107_65629467
transcript_159738.known	chr5	+	4257	25	FSM	ENSG00000112851.15	ENST00000511297.5	4257	25	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_17	32.9667340747541	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCGGGGAAGACAGCAAGA	65926582	False	NA	NA	False	NA	NA	NA	65926726	66078546	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_65926807_65988634_65988683_65992709_65992908_65994746_65994865_66012048_66012128_66013548_66013639_66014668_66014726_66021321_66021386_66023289_66023365_66024305_66024451_66025479_66025553_66025847_66025978_66026301_66026418_66028273_66028344_66038382_66038483_66043076_66043199_66044136_66044299_66046352_66046539_66048666_66048782_66050782_66050967_66053405_66054952_66075023_66075231_66076315_66076409_66076874_66076950_66078422
transcript_15974.known	chr1	+	2694	6	FSM	ENSG00000162734.13	ENST00000368076.1	2694	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	223.506062557596	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATTTTAAAATTTCTGTG	160193473	True	NA	33	True	AATAAA	-25	NA	160205420	160215376	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_160205523_160207132_160207238_160208463_160208666_160211542_160211717_160213109_160213266_160213421
transcript_159740.nic	chr5	+	3036	19	ISM	ENSG00000112851.15	ENST00000506030.5	4386	26	-1043	29785	-826	22803	5prime_fragment	FALSE	canonical	3	55	junction_17	9.17255703002907	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTAGATGTTAAAGGAAAG	65923558	True	NA	NA	False	NA	NA	NA	65925729	66048780	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_65926807_65988634_65988683_65992709_65992908_65994746_65994865_66012048_66012128_66013548_66013639_66014668_66014726_66021321_66021386_66023289_66023365_66024305_66024451_66025479_66025553_66025847_66025978_66026301_66026418_66028273_66028344_66038382_66038483_66043076_66043199_66044136_66044311_66046352_66046539_66048666
transcript_159743.nic	chr5	+	2816	18	ISM	ENSG00000112851.15	ENST00000506030.5	4386	26	-1095	32185	-878	20403	5prime_fragment	FALSE	canonical	3	55	junction_17	9.43159675246128	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAGTTGATGAAAGAGAA	65925649	False	NA	-1	True	AGTAAA	-3	NA	65925677	66046380	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_65926807_65988634_65988683_65992709_65992908_65994746_65994865_66012048_66012128_66013548_66013639_66014668_66014726_66021321_66021386_66023289_66023365_66024305_66024451_66025479_66025553_66025847_66025978_66026301_66026418_66028273_66028344_66038382_66038483_66043076_66043199_66044136_66044311_66046352
transcript_159744.nic	chr5	+	2503	16	ISM	ENSG00000112851.15	ENST00000511297.5	4257	25	-962	35372	-791	17197	5prime_fragment	FALSE	canonical	3	59	junction_5	9.15690389208541	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAAAGGGAGGCACCTCC	65923593	True	NA	NA	False	NA	NA	NA	65925764	66043174	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_65926807_65988634_65988683_65992709_65992908_65994746_65994865_66012048_66012128_66013548_66013639_66014668_66014726_66021321_66021386_66023289_66023365_66024305_66024451_66025479_66025553_66025847_66025978_66026301_66026418_66028273_66028344_66038382_66038483_66043076
transcript_159747.known	chr5	+	6699	12	FSM	ENSG00000153914.16	ENST00000334121.11	6699	12	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_5	22.0671402244593	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTGTTGAGTAGTAATT	66138863	True	NA	19	True	AATAAA	-20	NA	66144299	66183615	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_66144538_66153462_66153597_66159218_66159335_66162108_66162274_66162413_66162593_66163791_66163923_66164782_66164898_66170050_66170171_66170584_66170948_66174945_66175042_66177513_66177659_66178718
transcript_159755.nic	chr5	+	1377	9	ISM	ENSG00000153914.16	ENST00000334121.11	6699	12	-135	12987	-53	0	5prime_fragment	FALSE	canonical	3	144	junction_5	18.1107702762748	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGTGAAAGAGAAAGACAGG	66144148	False	NA	14	True	NA	NA	NA	66144164	66170628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_66144538_66153462_66153597_66159218_66159335_66162108_66162274_66162413_66162593_66163791_66163923_66164782_66164898_66170050_66170171_66170584
transcript_159756.nic	chr5	+	1263	9	ISM	ENSG00000153914.16	ENST00000334121.11	6699	12	0	12966	0	0	5prime_fragment	FALSE	canonical	3	144	junction_5	18.1107702762748	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGGAGAGAGAGAGGGAA	66138863	True	NA	-16	True	NA	NA	NA	66144299	66170649	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_66144538_66153462_66153597_66159218_66159335_66162108_66162274_66162413_66162593_66163791_66163923_66164782_66164898_66170050_66170171_66170584
transcript_159757.nic	chr5	+	1504	9	ISM	ENSG00000153914.16	ENST00000334121.11	6699	12	-135	12860	-53	-60	5prime_fragment	FALSE	canonical	3	144	junction_5	18.1107702762748	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACAGAGAGAGAGAACGGG	66144148	False	NA	29	True	AAAAAG	-11	NA	66144164	66170755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_66144538_66153462_66153597_66159218_66159335_66162108_66162274_66162413_66162593_66163791_66163923_66164782_66164898_66170050_66170171_66170584
transcript_159758.nic	chr5	+	1564	9	ISM	ENSG00000153914.16	ENST00000334121.11	6699	12	-135	12800	-53	0	5prime_fragment	FALSE	canonical	3	144	junction_5	18.1107702762748	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAACAGGACAAAGAAAAGG	66144148	False	NA	-1	True	AAAAAG	-35	NA	66144164	66170815	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_66144538_66153462_66153597_66159218_66159335_66162108_66162274_66162413_66162593_66163791_66163923_66164782_66164898_66170050_66170171_66170584
transcript_159759.nic	chr5	+	1640	9	ISM	ENSG00000153914.16	ENST00000334121.11	6699	12	-135	12724	-53	76	5prime_fragment	FALSE	canonical	3	144	junction_5	18.1107702762748	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGAACACCACCCAGGAG	66144148	False	NA	-32	True	GATAAA	-4	NA	66144164	66170891	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_66144538_66153462_66153597_66159218_66159335_66162108_66162274_66162413_66162593_66163791_66163923_66164782_66164898_66170050_66170171_66170584
transcript_159761.nic	chr5	+	1334	8	ISM	ENSG00000153914.16	ENST00000334121.11	6699	12	-135	13444	-53	-457	5prime_fragment	FALSE	canonical	3	144	junction_5	19.2936491612961	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTTTTAGAGAAATTAAC	66144148	False	NA	NA	False	NA	NA	NA	66144164	66170171	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_66144538_66153462_66153597_66159218_66159335_66162108_66162274_66162413_66162593_66163791_66163923_66164782_66164898_66170050
transcript_159763.known	chr5	+	559	2	FSM	ENSG00000153914.16	ENST00000520058.1	559	2	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTACAATTTAACATTCATT	66138870	True	NA	NA	False	ATTAAA	-32	NA	66144306	66153790	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_66144538_66153462
transcript_159771.known	chr5	-	777	2	FSM	ENSG00000229666.2	ENST00000451496.2	904	2	127	0	127	0	multi-exon	FALSE	canonical	3	18	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGGAACCAGAATGAATTA	-67003834	False	NA	NA	False	AATAAA	-16	NA	67003953	67001382	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_67002050_67003843
transcript_159777.known	chr5	+	6975	16	FSM	ENSG00000145675.15	ENST00000521381.6	6975	16	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_1	13.0673469210684	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGGGTTGAAATTTCAC	68214956	True	NA	10	True	AATAAA	-19	NA	68215755	68301821	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_68215950_68226289_68227010_68273389_68273483_68273938_68274014_68279601_68279734_68280527_68280730_68280926_68281007_68292258_68292362_68293100_68293200_68293302_68293484_68293708_68293835_68294535_68294679_68295147_68295325_68295419_68295489_68296170_68296342_68297411
transcript_159781.nic	chr5	+	2136	12	ISM	ENSG00000145675.15	ENST00000521381.6	6975	16	-54	7209	-54	0	5prime_fragment	FALSE	canonical	3	16	junction_1	12.5190763528015	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGCGGTACAGCAAAGAAT	68214902	True	NA	NA	False	CATAAA	-28	NA	68215701	68294612	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_68215950_68226289_68227010_68273389_68273483_68273938_68274014_68279601_68279734_68280527_68280730_68280926_68281007_68292258_68292362_68293100_68293200_68293302_68293484_68293708_68293835_68294535
transcript_159783.known	chr5	+	2625	10	FSM	ENSG00000145675.15	ENST00000320694.12	2625	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	12.0185042515466	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCTTCAGAATTAAAACTA	NA	False	NA	NA	False	AGTAAA	-29	NA	68288367	68298583	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_68288752_68292258_68292362_68293100_68293200_68293302_68293484_68293708_68293835_68294535_68294679_68295147_68295325_68295419_68295489_68296170_68296342_68297411
transcript_159788.known	chr5	+	3891	16	FSM	ENSG00000145675.15	ENST00000521657.5	3891	16	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	14.4259026291829	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATATATGAATATGACAAAG	68214976	True	NA	2	True	AATAAA	-17	NA	68215775	68298753	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_68215954_68226289_68227010_68273389_68273483_68273938_68274014_68279601_68279734_68280527_68280730_68280926_68281007_68292258_68292362_68293100_68293200_68293302_68293484_68293708_68293835_68294535_68294679_68295147_68295325_68295419_68295489_68296170_68296342_68297411
transcript_159792.known	chr5	+	3992	16	FSM	ENSG00000145740.20	ENST00000396591.8	3992	16	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_12	26.9240908233995	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGCATATTGATGTTTT	69089557	True	NA	NA	False	ATTAAA	-21	NA	69094013	69131069	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69094339_69100806_69100930_69103061_69103129_69104630_69104717_69108348_69108437_69113139_69113228_69114419_69114497_69115236_69115408_69115925_69116215_69116393_69116603_69117238_69117397_69118498_69118629_69121693_69121896_69123198_69123426_69128003_69128133_69129446
transcript_159799.nic	chr5	+	3152	15	NIC	ENSG00000145740.20	novel	3992	16	NA	NA	-69	140	combination_of_known_junctions	FALSE	canonical	3	31	junction_14	49.1871166971555	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTGCAAATGAATAATTA	69093909	True	NA	NA	False	AATAAA	-20	NA	69093921	69130266	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_69094339_69100806_69100930_69103061_69103129_69104630_69104717_69108348_69108437_69113139_69113228_69114419_69114497_69115236_69115408_69115925_69116215_69116393_69116603_69117238_69117397_69118498_69118629_69121693_69121896_69123198_69123426_69129446
transcript_1598.known	chr1	+	2822	15	FSM	ENSG00000130762.15	ENST00000378378.9	2822	15	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	17.8589999034386	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGATTTTCACAGTGACT	3452848	True	NA	9	True	ATTAAA	-16	NA	3454664	3481113	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_3454812_3463065_3463673_3466147_3466194_3467167_3467338_3468879_3468937_3469432_3469594_3473077_3473231_3473392_3473523_3474707_3474783_3475969_3476063_3477874_3478027_3478423_3478613_3479516_3479591_3479811_3479914_3480447
transcript_159803.nic	chr5	+	3131	15	NIC	ENSG00000145740.20	novel	3992	16	NA	NA	-42	140	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	40.4788304461198	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTGCAAATGAATAATTA	69089492	True	NA	NA	False	AATAAA	-20	NA	69093948	69130266	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_69094339_69103061_69103129_69104630_69104717_69108348_69108437_69113139_69113228_69114419_69114497_69115236_69115408_69115925_69116215_69116393_69116603_69117238_69117397_69118498_69118629_69121693_69121896_69123198_69123426_69128003_69128133_69129446
transcript_159815.known	chr5	+	1317	4	FSM	ENSG00000145740.20	ENST00000380860.8	1317	4	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_3	50.6907837338855	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTTTGTATTTCTTCA	69089534	True	NA	13	True	AATAAA	-16	NA	69093990	69104740	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69094339_69100806_69100930_69103061_69103129_69103961
transcript_159816.known	chr5	+	681	3	FSM	ENSG00000145740.20	ENST00000502979.1	681	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	36.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCGGCCCAGAATAAGAATA	69094174	False	NA	NA	False	NA	NA	NA	69094197	69104434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69094339_69103061_69103129_69103961
transcript_159822.known	chr5	+	2029	9	FSM	ENSG00000134057.15	ENST00000256442.10	2029	9	0	0	0	0	multi-exon	FALSE	canonical	3	5854	junction_6	208.77436235084	1620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATCTTTTTTAAAAAGTT	69115853	True	NA	16	True	AATAAA	-20	NA	69167149	69178245	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69167284_69167907_69168079_69168172_69168344_69171269_69171453_69174250_69174410_69174876_69175114_69175396_69175538_69177238_69177350_69177523
transcript_15983.nnic	chr1	+	2577	5	NIC	ENSG00000162734.13	novel	2694	6	NA	NA	-48	0	combination_of_known_splicesites	FALSE	canonical	1	14	junction_1	228.867865809073	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAACTGATTTTAAAATTTC	160193384	True	NA	29	True	AATAAA	-21	NA	160205331	160215372	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_160205523_160207132_160207238_160211542_160211717_160213109_160213266_160213421
transcript_159830.known	chr5	+	1190	8	FSM	ENSG00000134057.15	ENST00000505500.5	1190	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_7	2103.6148285603	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGTAAACTTGAGTTGGA	69167151	False	NA	-45	True	NA	NA	NA	69167262	69177630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69167284_69167907_69168079_69168172_69168344_69171269_69171453_69174250_69174410_69174876_69175114_69175396_69175538_69177523
transcript_159850.known	chr5	+	767	5	FSM	ENSG00000134057.15	ENST00000507798.1	767	5	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_3	2552.22226696657	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGCATTTACTTTTAAT	69174233	False	NA	-14	True	AATAAA	-31	NA	69174256	69177700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69174410_69174876_69175114_69175396_69175538_69177290_69177350_69177523
transcript_159851.known	chr5	+	1354	9	FSM	ENSG00000153044.10	ENST00000283006.7	1354	9	0	0	0	0	multi-exon	FALSE	canonical	3	692	junction_3	94.5555392348857	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTCTTATTTTTTTTTA	69180062	True	NA	29	True	AATAAA	-15	NA	69189582	69210357	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69189769_69191794_69191851_69194646_69194696_69195716_69195792_69197052_69197110_69202505_69202570_69202918_69202971_69208195_69208360_69209706
transcript_159855.known	chr5	+	1305	8	FSM	ENSG00000153044.10	ENST00000515001.5	1305	8	0	0	0	0	multi-exon	TRUE	canonical	3	50	junction_4	262.180806906616	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTCTTATTTTTTTTT	69180053	True	NA	28	True	AATAAA	-14	NA	69189573	69210356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69189769_69191794_69191851_69194646_69194696_69195716_69195792_69202505_69202570_69202918_69202971_69208195_69208360_69209706
transcript_159856.known	chr5	+	437	6	FSM	ENSG00000153044.10	ENST00000513575.5	437	6	0	0	0	0	multi-exon	FALSE	canonical	1	35	junction_4	332.536073231161	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAACTTACACATTAGGCT	69180071	True	NA	-93	True	AATAAA	-22	NA	69189591	69202569	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69189769_69191794_69191851_69194646_69194696_69195716_69195751_69197052_69197110_69202505
transcript_159858.known	chr5	+	1315	4	FSM	ENSG00000134056.12	ENST00000256441.5	1315	4	0	0	0	0	multi-exon	FALSE	canonical	3	849	junction_1	97.6740611535234	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTCTAGAATATGCTTT	69211887	True	NA	10	True	AATAAA	-20	NA	69217759	69230158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69217872_69226337_69226402_69228199_69228388_69229207
transcript_159860.known	chr5	+	1200	4	FSM	ENSG00000134056.12	ENST00000602380.1	1200	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	475.766282491262	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGCATAGGAATAAAGATT	69211959	True	NA	NA	False	AAAAAG	-33	NA	69217831	69229875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69218112_69226337_69226402_69228199_69228388_69229207
transcript_159862.known	chr5	+	298	3	FSM	ENSG00000134056.12	ENST00000507022.1	298	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	505	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGCTGTTTGTCATCAG	69211913	True	NA	-52	True	NA	NA	NA	69217785	69229231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69217872_69228199_69228388_69229207
transcript_159867.known	chr5	+	1426	12	FSM	ENSG00000134058.12	ENST00000256443.8	1426	12	0	0	0	0	multi-exon	FALSE	canonical	3	619	junction_4	36.3774973582514	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCATATAGTATCACAAATC	69232769	True	NA	17	True	AATAAA	-30	NA	69234885	69277430	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69235042_69235393_69235454_69252417_69252452_69254601_69254670_69255459_69255529_69258042_69258154_69259817_69259937_69262204_69262305_69269206_69269294_69272891_69273042_69276542_69276691_69277106
transcript_159870.nic	chr5	+	1209	10	NIC	ENSG00000134058.12	novel	1426	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_3	199.92665321729	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTCTGGTTTTTCTGA	69232724	True	NA	19	True	AATAAA	-3	NA	69234840	69277305	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_69235042_69235393_69235454_69252417_69252452_69258042_69258154_69259817_69259937_69262204_69262305_69269206_69269294_69272891_69273042_69276542_69276691_69277106
transcript_159872.known	chr5	+	261	2	FSM	ENSG00000134058.12	ENST00000512985.1	261	2	0	0	0	0	multi-exon	FALSE	canonical	3	700	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGTATTATTAATTGACT	69232766	True	NA	NA	False	AAGAAA	-43	NA	69234882	69235495	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69235042_69235393
transcript_15988.known	chr1	+	1021	4	FSM	ENSG00000162734.13	ENST00000368077.5	1021	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	203.529413653708	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTCATGGGCCTAGCAT	160193432	True	NA	NA	False	NA	NA	NA	160205379	160214035	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_160205523_160211542_160211651_160213109_160213266_160213421
transcript_159880.known	chr5	+	3054	19	FSM	ENSG00000152942.19	ENST00000354868.10	3054	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	77.1306411387144	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTCTCCTGTCTTTT	69368044	True	NA	24	True	ATTAAA	-14	NA	69369817	69414801	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69369934_69371034_69371172_69371453_69371558_69372033_69372218_69373829_69374088_69374627_69374712_69381900_69382058_69384796_69384934_69386042_69386096_69386179_69386306_69386395_69386466_69389033_69389146_69391830_69392014_69393154_69393241_69393353_69393501_69396396_69396547_69400048_69400170_69410492_69410551_69414030
transcript_159882.known	chr5	+	2943	18	FSM	ENSG00000152942.19	ENST00000354312.7	2943	18	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	28.2243851475106	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTCTCCTGTCTTTT	69368051	True	NA	24	True	ATTAAA	-14	NA	69369824	69414801	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69369934_69371034_69371172_69372033_69372218_69373829_69374088_69374627_69374712_69381900_69382058_69384796_69384934_69386042_69386096_69386179_69386306_69386395_69386466_69389033_69389146_69391830_69392014_69393154_69393241_69393353_69393501_69396396_69396547_69400048_69400170_69410492_69410551_69414030
transcript_159884.known	chr5	+	3057	18	FSM	ENSG00000152942.19	ENST00000616683.4	3057	18	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	50.5581990174618	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTGTTTCTCCTGTCTT	69368286	False	NA	22	True	ATTAAA	-12	NA	69370059	69414799	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69370285_69371034_69371172_69372033_69372218_69373829_69374088_69374627_69374712_69381900_69382058_69384796_69384934_69386042_69386096_69386179_69386306_69386395_69386466_69389033_69389146_69391830_69392014_69393154_69393241_69393353_69393501_69396396_69396547_69400048_69400170_69410492_69410551_69414030
transcript_159886.known	chr5	+	2323	17	FSM	ENSG00000152942.19	ENST00000521422.5	2323	17	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	55.8099453502689	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTAATATGCTTTTCTGA	69368046	True	NA	NA	False	NA	NA	NA	69369819	69414360	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69369934_69371034_69371172_69373829_69374088_69374627_69374712_69381900_69382058_69384796_69384934_69386042_69386096_69386179_69386306_69386395_69386466_69389033_69389146_69391830_69392014_69393154_69393241_69393353_69393501_69396396_69396547_69400048_69400170_69410492_69410551_69414030
transcript_159897.known	chr5	-	1626	5	FSM	ENSG00000085231.14	ENST00000380822.9	1626	5	0	0	0	0	multi-exon	FALSE	canonical	3	778	junction_1	467.216759117222	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCTTTTGTGTCCAGT	-69353052	True	NA	0	True	TATAAA	-16	NA	69369520	69350983	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_69352254_69355648_69355795_69355894_69355954_69366502_69366596_69369462
transcript_159898.known	chr5	-	1183	5	FSM	ENSG00000085231.14	ENST00000380818.7	1183	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	340.898078610015	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTATTCCTTTTTTCTT	-69369955	True	NA	-7	True	AATAAA	-17	NA	69370013	69351725	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_69352254_69355648_69355795_69355894_69355954_69366502_69366596_69369656
transcript_1599.nnic	chr1	+	3235	15	NNC	ENSG00000130762.15	novel	2822	15	NA	NA	-380	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	27.1014722094274	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGATTTTCACAGTGACT	NA	False	NA	9	True	ATTAAA	-16	NA	3454284	3481113	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_3454845_3463065_3463673_3466147_3466194_3467167_3467338_3468879_3468937_3469432_3469594_3473077_3473231_3473392_3473523_3474707_3474783_3475969_3476063_3477874_3478027_3478423_3478613_3479516_3479591_3479811_3479914_3480447
transcript_15991.known	chr1	+	2420	4	FSM	ENSG00000162734.13	ENST00000360472.9	2420	4	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_3	23.4426012966897	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAACTGATTTTAAAATTTC	160193436	True	NA	29	True	AATAAA	-21	NA	160205383	160215372	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_160205523_160211542_160211717_160213109_160213266_160213421
transcript_159910.known	chr5	-	1057	3	FSM	ENSG00000273841.6	ENST00000508954.4	1705	3	0	648	0	-489	multi-exon	FALSE	canonical	3	24	junction_2	758.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGCCATTGATCAAGCC	-69352997	True	NA	NA	False	AAGAAA	-8	NA	69369465	69365431	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_69365755_69366502_69366596_69368824
transcript_159911.known	chr5	-	761	3	FSM	ENSG00000273841.6	ENST00000509462.6	1057	3	0	296	0	-296	multi-exon	FALSE	canonical	3	23	junction_2	759	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGACCATGTCTGTTTCA	-69369258	False	NA	NA	False	NA	NA	NA	69369316	69365238	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_69365755_69366502_69366596_69369164
transcript_159912.known	chr5	-	582	3	FSM	ENSG00000273841.6	ENST00000512152.6	996	3	0	414	0	-414	multi-exon	FALSE	canonical	3	46	junction_2	747.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCTGAAATCTTTACAGAA	-69353009	True	NA	NA	False	NA	NA	NA	69369477	69365356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_69365755_69366502_69366596_69369386
transcript_159913.known	chr5	-	1163	3	FSM	ENSG00000273841.6	ENST00000217893.10	1163	3	0	0	0	0	multi-exon	FALSE	canonical	3	1541	junction_1	187.5	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGGTGCTTTGGCAGTT	-69353052	True	NA	-6	True	AATAAA	-17	NA	69369520	69364742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_69365755_69366502_69366596_69369462
transcript_159914.known	chr5	-	1461	3	FSM	ENSG00000273841.6	ENST00000328663.8	1461	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	740.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTGGTGCTTTGGCAGT	-69369955	True	NA	-7	True	AATAAA	-16	NA	69370013	69364743	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_69365755_69366502_69366596_69369656
transcript_159918.known	chr5	+	2789	17	FSM	ENSG00000152942.19	ENST00000345306.10	2789	17	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	59.741336976586	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTCTCCTGTCTTTT	69368068	True	NA	24	True	ATTAAA	-14	NA	69369841	69414801	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69369934_69372033_69372218_69373829_69374088_69374627_69374712_69381900_69382058_69384796_69384934_69386042_69386096_69386179_69386306_69386395_69386466_69389033_69389146_69391830_69392014_69393154_69393241_69393353_69393501_69396396_69396547_69400048_69400170_69410492_69410551_69414030
transcript_159921.known	chr5	+	4423	7	FSM	ENSG00000152939.17	ENST00000325631.10	4423	7	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	35.5340212566305	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCACGATGCTCAGGTGAC	69414119	True	NA	12	True	AATAAA	-25	NA	69415115	69444330	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69415171_69419370_69420532_69424600_69424637_69432526_69432676_69432921_69433094_69440449_69440501_69441531
transcript_159926.known	chr5	+	3353	7	FSM	ENSG00000152939.17	ENST00000645446.1	3353	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	51.0764677278642	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTGTGAGACAGAGT	69414119	True	NA	NA	False	NA	NA	NA	69415115	69442836	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69415171_69418946_69420532_69424600_69424637_69432526_69432676_69432921_69433094_69440449_69440501_69441531
transcript_159930.nic	chr5	+	4728	7	NIC	ENSG00000152939.17	novel	1581	8	NA	NA	50	-188	intron_retention	FALSE	canonical	3	106	junction_1	15.0296004234607	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATGCAGTAACACTGATT	69414180	True	NA	-48	True	AATAAA	-30	NA	69415176	69444142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_69415725_69419370_69420532_69424600_69424637_69432526_69432676_69432921_69433094_69440449_69440501_69441531
transcript_159931.nic	chr5	+	4798	7	NIC	ENSG00000152939.17	novel	1581	8	NA	NA	50	-118	intron_retention	FALSE	canonical	3	106	junction_1	15.0296004234607	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGTGTGTGTGCCCTTT	69414180	True	NA	22	True	ATTAAA	-16	NA	69415176	69444212	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_69415725_69419370_69420532_69424600_69424637_69432526_69432676_69432921_69433094_69440449_69440501_69441531
transcript_159934.nic	chr5	+	1645	6	ISM	ENSG00000152939.17	ENST00000325631.10	4423	7	-25	3834	-25	0	5prime_fragment	FALSE	canonical	3	44	junction_1	38.9255700022492	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGTGAGTAAAACAGTTT	69414094	True	NA	NA	False	AAGAAA	-6	NA	69415090	69440496	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_69415171_69419370_69420532_69424600_69424637_69432526_69432676_69432921_69433094_69440449
transcript_159935.known	chr5	+	4376	6	FSM	ENSG00000152939.17	ENST00000454295.6	4376	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	53.484951154507	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCACGATGCTCAGGTGAC	69414130	True	NA	12	True	AATAAA	-25	NA	69415126	69444330	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69415171_69419370_69420532_69432526_69432676_69432921_69433094_69440449_69440501_69441531
transcript_159939.known	chr5	+	1908	6	FSM	ENSG00000152939.17	ENST00000512803.5	1908	6	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	15.6665248220529	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGTGAGTAAAACAGTTT	69414385	False	NA	NA	False	AAGAAA	-6	NA	69415381	69440496	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69415725_69419370_69420532_69424600_69424637_69432526_69432676_69432921_69433094_69440449
transcript_159945.nic	chr5	+	2077	5	NIC	ENSG00000152939.17	novel	1908	6	NA	NA	50	0	intron_retention	FALSE	canonical	3	15	junction_2	52.6088158011564	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGTGAGTAAAACAGTTT	69414180	True	NA	NA	False	AAGAAA	-6	NA	69415176	69440496	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_69415725_69419370_69420532_69432526_69432676_69432921_69433094_69440449
transcript_159947.known	chr5	+	6438	9	FSM	ENSG00000197822.12	ENST00000355237.6	6438	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	101.600935035067	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCAGTCTCCTCTCTTCGC	NA	False	NA	9	True	NA	NA	NA	69492291	69558104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69492660_69504176_69504295_69509140_69509820_69513947_69514110_69534693_69534840_69544903_69545120_69547929_69548102_69551543_69551586_69553569
transcript_159951.known	chr5	+	6181	9	FSM	ENSG00000197822.12	ENST00000396442.7	6181	9	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_3	31.0674669067177	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCAGTCTCCTCTCTTCGC	69489438	True	NA	9	True	NA	NA	NA	69492789	69558104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69492901_69504176_69504295_69509140_69509820_69513947_69514110_69534693_69534840_69544903_69545120_69547929_69548102_69551543_69551586_69553569
transcript_159956.known	chr5	+	3261	9	FSM	ENSG00000197822.12	ENST00000681895.1	3261	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	110.596959723132	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTATTTTTTTTTTTT	69489449	True	NA	NA	False	NA	NA	NA	69492800	69555253	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69492901_69504176_69504295_69509140_69509820_69513947_69514110_69534693_69534840_69544961_69545120_69547929_69548102_69551543_69551586_69553569
transcript_159961.known	chr5	+	3168	8	FSM	ENSG00000197822.12	ENST00000680784.1	3168	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	111.381491885743	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTATTTTTTTTTTTT	69489438	True	NA	NA	False	NA	NA	NA	69492789	69555253	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69492901_69504176_69504295_69509140_69509820_69534693_69534840_69544903_69545120_69547929_69548102_69551543_69551586_69553569
transcript_159966.known	chr5	+	2903	5	FSM	ENSG00000197822.12	ENST00000680098.1	2903	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	135.067575679732	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTGATTAAGCATATGC	69489438	True	NA	6	True	AATAAA	-16	NA	69492789	69521815	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69492901_69504176_69504295_69509140_69509820_69513947_69514110_69519982
transcript_159970.nic	chr5	+	1695	17	NIC	ENSG00000183474.16	novel	4555	17	NA	NA	3	279	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	176.036384289584	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTATGTTAATTCATTA	69556799	True	NA	NA	False	ATTAAA	-14	NA	69560193	69592525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_69560243_69562672_69562771_69565099_69565189_69566130_69566209_69566588_69566626_69566966_69567054_69567726_69567778_69568152_69568208_69572444_69572551_69578711_69578803_69579020_69579109_69579756_69579865_69582365_69582430_69585593_69585698_69586253_69586357_69590327_69590368_69592078
transcript_159972.known	chr5	+	4555	17	FSM	ENSG00000183474.16	ENST00000380729.8	4555	17	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	171.875852270614	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTGATATATTTTATTAT	69556796	True	NA	NA	False	AATAAA	-24	NA	69560190	69595221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69560404_69562672_69562771_69565099_69565189_69566130_69566209_69566588_69566626_69566966_69567054_69567726_69567778_69568152_69568208_69572444_69572551_69578711_69578803_69579020_69579109_69579756_69579865_69582365_69582430_69585593_69585698_69586253_69586357_69590327_69590368_69592078
transcript_159977.nic	chr5	+	1640	16	NIC	ENSG00000183474.16	novel	2952	16	NA	NA	-40	279	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	149.926589443708	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTATGTTAATTCATTA	69560140	False	NA	NA	False	ATTAAA	-14	NA	69560150	69592525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_69560243_69565099_69565189_69566130_69566209_69566588_69566626_69566966_69567054_69567726_69567778_69568152_69568208_69572444_69572551_69578711_69578803_69579020_69579109_69579756_69579865_69582365_69582430_69585593_69585698_69586253_69586357_69590327_69590368_69592078
transcript_159979.nic	chr5	+	2028	16	NIC	ENSG00000183474.16	novel	2952	16	NA	NA	-40	53	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	149.926589443708	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTATGAAATTAATACATAT	69560140	False	NA	NA	False	NA	NA	NA	69560150	69592913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_69560243_69565099_69565189_69566130_69566209_69566588_69566626_69566966_69567054_69567726_69567778_69568152_69568208_69572444_69572551_69578711_69578803_69579020_69579109_69579756_69579865_69582365_69582430_69585593_69585698_69586253_69586357_69590327_69590368_69592078
transcript_159983.known	chr5	+	2952	16	FSM	ENSG00000183474.16	ENST00000510979.5	2952	16	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_1	136.807504667446	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTACTAAACATACAAAAAAT	69556847	True	NA	NA	False	NA	NA	NA	69560241	69593767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69560404_69565099_69565189_69566130_69566209_69566588_69566626_69566966_69567054_69567726_69567778_69568152_69568208_69572444_69572551_69578711_69578803_69579020_69579109_69579756_69579865_69582365_69582430_69585593_69585698_69586253_69586357_69590327_69590368_69592078
transcript_159992.known	chr5	+	1956	15	FSM	ENSG00000183474.16	ENST00000446221.6	1956	15	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	158.633723285011	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCCACTGCACTCCACC	69556899	False	NA	NA	False	NA	NA	NA	69560293	69592860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_69560404_69565099_69565189_69566130_69566209_69566966_69567054_69567726_69567778_69568152_69568208_69572444_69572551_69578711_69578803_69579020_69579109_69579756_69579865_69582365_69582430_69585593_69585698_69586253_69586357_69590327_69590368_69592078
transcript_16.known	ERCC-00044	+	1149	1	FSM	ERCC-00044A	DQ459424	1149	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AAAAAG	-27	NA	0	1149	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00044_+_0_1100
transcript_160006.known	chr5	+	703	3	FSM	ENSG00000205572.10	ENST00000380751.9	703	3	0	0	0	0	multi-exon	FALSE	canonical	3	2021	junction_1	96	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTTAACATAGTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	70025246	70032696	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_70025459_70026406_70026516_70032314
transcript_160009.known	chr5	+	1907	3	FSM	ENSG00000205572.10	ENST00000380750.8	1907	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	987.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTGTCAGTCATTTCT	NA	False	NA	NA	False	NA	NA	NA	70025250	70043113	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_70025459_70026406_70026516_70041523
transcript_160010.known	chr5	+	433	3	FSM	ENSG00000205572.10	ENST00000514285.1	433	3	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_1	987	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTTTAAAAACTATTTTAA	NA	False	NA	NA	False	NA	NA	NA	70025586	70032493	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_70025732_70026406_70026516_70032314
transcript_160013.known	chr5	+	792	3	FSM	ENSG00000205572.10	ENST00000515588.1	792	3	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_2	96.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCCTGGGTTCAAGCAGT	NA	False	NA	NA	False	NA	NA	NA	70025533	70042008	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_70025732_70026406_70026516_70041523
transcript_160015.nic	chr5	+	636	2	ISM	ENSG00000205572.10	ENST00000503931.5	569	3	-61	3244	44	363	5prime_fragment	FALSE	canonical	3	2021	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGCCTCATTTTGGGGAA	NA	False	NA	NA	False	NA	NA	NA	70025294	70026878	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_70025459_70026406
transcript_160018.known	chr5	+	1550	9	FSM	ENSG00000205571.14	ENST00000506734.5	1550	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	878.118585385824	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATCTGTGATTGTATTT	NA	False	NA	NA	False	AATAAA	-26	NA	70049656	70077596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_70049767_70063414_70063487_70065964_70066085_70066933_70067135_70067293_70067447_70069234_70069331_70070640_70070752_70071281_70071391_70077018
transcript_160019.known	chr5	+	1482	9	FSM	ENSG00000205571.14	ENST00000380743.9	1482	9	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_7	617.461625831922	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTATCTGTGATTGTATT	NA	False	NA	NA	False	AATAAA	-25	NA	70049668	70077595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_70049767_70063414_70063487_70065964_70066085_70066933_70067135_70067293_70067447_70069234_70069331_70070640_70070752_70076520_70076575_70077018
transcript_160021.known	chr5	+	900	8	FSM	ENSG00000205571.14	ENST00000380741.8	900	8	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_7	538.123648638944	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTATGAAAGTGAATCTT	NA	False	NA	NA	False	AAAAAG	-45	NA	70049685	70076586	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_70049767_70063414_70063487_70065964_70066085_70066933_70067135_70067293_70067447_70069234_70069331_70070640_70070752_70076520
transcript_160022.known	chr5	+	1440	8	FSM	ENSG00000205571.14	ENST00000626847.2	1440	8	0	0	0	0	multi-exon	FALSE	canonical	3	576	junction_7	534.89911312741	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTATCTGTGATTGT	NA	False	NA	NA	False	AATAAA	-22	NA	70049653	70077592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_70049767_70063414_70063487_70065964_70066085_70066933_70067135_70067293_70067447_70069234_70069331_70070640_70070752_70077018
transcript_160023.nic	chr5	+	997	7	ISM	ENSG00000205571.14	ENST00000638794.1	846	8	-65	333	-17	0	5prime_fragment	FALSE	canonical	3	1685	junction_6	225.080294314915	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TACTAAAAAATAAAAATAAA	NA	False	NA	NA	False	TATAAA	-26	NA	70049620	70070849	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_70049767_70063414_70063487_70065964_70066085_70066933_70067135_70067293_70067447_70069234_70069331_70070640
transcript_160029.known	chr5	+	846	8	FSM	ENSG00000205571.14	ENST00000638794.1	846	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	724.798860205438	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGATTCACGCCATTCTC	NA	False	NA	NA	False	NA	NA	NA	70049685	70071182	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_70049767_70063414_70063487_70065964_70066085_70066933_70067135_70067293_70067447_70069234_70069331_70070640_70070752_70071170
transcript_160043.nic	chr5	+	2012	16	NIC	ENSG00000226259.10	novel	1432	16	NA	NA	-40	53	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	162.586455633781	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTATGAAATTAATACATAT	NA	False	NA	NA	False	NA	NA	NA	70415311	70448068	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_70415390_70420248_70420338_70421279_70421358_70421736_70421772_70422112_70422200_70422872_70422924_70423298_70423354_70427584_70427691_70433869_70433961_70434178_70434267_70434914_70435023_70437530_70437595_70440755_70440860_70441415_70441519_70445482_70445523_70447233
transcript_160046.known	chr5	+	1954	15	FSM	ENSG00000226259.10	ENST00000513202.5	1954	15	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	158.921299994169	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCCACTGCACTCCACC	NA	False	NA	NA	False	NA	NA	NA	70415442	70448015	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_70415551_70420248_70420338_70421279_70421358_70422112_70422200_70422872_70422924_70423298_70423354_70427584_70427691_70433869_70433961_70434178_70434267_70434914_70435023_70437530_70437595_70440755_70440860_70441415_70441519_70445482_70445523_70447233
transcript_160047.known	chr5	+	1432	16	FSM	ENSG00000226259.10	ENST00000508065.7	1432	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	162.586455633781	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTGAAATTCAGTAGTAC	NA	False	NA	NA	False	ATTAAA	-26	NA	70415351	70447526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_70415390_70420248_70420338_70421279_70421358_70421734_70421772_70422112_70422200_70422872_70422924_70423298_70423354_70427584_70427691_70433869_70433961_70434178_70434267_70434914_70435023_70437530_70437595_70440755_70440860_70441415_70441519_70445482_70445523_70447233
transcript_160050.known	chr5	+	699	3	FSM	ENSG00000172058.16	ENST00000317633.14	699	3	0	0	0	0	multi-exon	FALSE	canonical	3	2023	junction_1	95.5	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTTAACATAGTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	70900668	70908115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_70900877_70901824_70901934_70907733
transcript_160052.known	chr5	+	663	3	FSM	ENSG00000172058.16	ENST00000507348.5	663	3	0	0	0	0	multi-exon	TRUE	canonical	3	253	junction_1	980.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTTAACATAGTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	70900977	70908115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_70901150_70901824_70901934_70907733
transcript_160055.nic	chr5	+	620	2	ISM	ENSG00000172058.16	ENST00000504458.1	569	3	-45	3245	-35	375	5prime_fragment	FALSE	canonical	3	2023	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGCCTCATTTTGGGGAA	NA	False	NA	NA	False	NA	NA	NA	70900728	70902296	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_70900877_70901824
transcript_160056.known	chr5	+	328	2	FSM	ENSG00000172058.16	ENST00000511162.1	328	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAAGCAGAGGTACGTGG	NA	False	NA	NA	False	NA	NA	NA	70900668	70901921	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_70900877_70901801
transcript_160060.known	chr5	+	1482	9	FSM	ENSG00000172062.17	ENST00000380707.9	1482	9	0	0	0	0	multi-exon	FALSE	canonical	3	1147	junction_7	403.48727907457	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTATCTGTGATTGTATT	NA	False	NA	NA	False	AATAAA	-25	NA	70925086	70953015	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_70925185_70938838_70938911_70941388_70941509_70942357_70942559_70942717_70942871_70944657_70944754_70946065_70946177_70951940_70951995_70952438
transcript_160061.known	chr5	+	900	8	FSM	ENSG00000172062.17	ENST00000351205.8	900	8	0	0	0	0	multi-exon	FALSE	canonical	3	1147	junction_7	354.164956378423	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTATGAAAGTGAATCTT	NA	False	NA	NA	False	AAAAAG	-45	NA	70925103	70952006	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_70925185_70938838_70938911_70941388_70941509_70942357_70942559_70942717_70942871_70944657_70944754_70946065_70946177_70951940
transcript_160063.known	chr5	+	1445	8	FSM	ENSG00000172062.17	ENST00000506163.5	1445	8	0	0	0	0	multi-exon	FALSE	canonical	3	544	junction_7	544.190542860472	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATATTATTTTGCCCT	NA	False	NA	NA	False	TTTAAA	-29	NA	70925094	70953040	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_70925185_70938838_70938911_70941388_70941509_70942357_70942559_70942717_70942871_70944657_70944754_70946065_70946177_70952438
transcript_160066.nic	chr5	+	1006	7	ISM	ENSG00000172062.17	ENST00000625245.2	885	8	-74	483	0	0	5prime_fragment	FALSE	canonical	3	1776	junction_6	205.007926676019	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TACTAAAAAATAAAAATAAA	NA	False	NA	NA	False	TATAAA	-26	NA	70925029	70946274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_70925185_70938838_70938911_70941388_70941509_70942357_70942559_70942717_70942871_70944657_70944754_70946065
transcript_160068.known	chr5	+	1219	7	FSM	ENSG00000172062.17	ENST00000503079.6	1219	7	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_5	786.973404181418	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGCTCTAGTCAAGTTT	NA	False	NA	NA	False	NA	NA	NA	70925029	70952347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_70925185_70938838_70938911_70941388_70941509_70942357_70942559_70942717_70942871_70946065_70946177_70951940
transcript_160070.known	chr5	-	2077	17	FSM	ENSG00000145736.14	ENST00000330280.11	2077	17	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	202.49934413474	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGGCTGAGGCAGGAGA	NA	False	NA	NA	False	NA	NA	NA	71067650	71035075	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_71035797_71037506_71037547_71041521_71041625_71042180_71042285_71045443_71045508_71048005_71048114_71048761_71048850_71049067_71049159_71055351_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71065124_71065223_71067493
transcript_160079.known	chr5	-	4336	16	FSM	ENSG00000145736.14	ENST00000274400.9	4336	16	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	189.061847611363	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTGATATATTTTATTTA	NA	False	NA	NA	False	AATAAA	-24	NA	71067601	71032669	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_71035797_71037506_71037547_71041521_71041625_71042180_71042285_71045443_71045508_71048005_71048114_71048761_71048850_71049067_71049159_71055351_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71067493
transcript_160080.nic	chr5	-	1861	16	NIC	ENSG00000145736.14	novel	2077	17	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_3	193.967305377879	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGGCTGAGGCAGGAGA	NA	False	NA	NA	False	NA	NA	NA	71067693	71035075	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_71035797_71037506_71037547_71041521_71041625_71042180_71042285_71045443_71045508_71048005_71048114_71048761_71048850_71049067_71049159_71055351_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71067654
transcript_160082.nic	chr5	-	1858	16	NIC	ENSG00000145736.14	novel	4336	16	NA	NA	-254	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_3	193.967305377879	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGTGTAAGAAGAAAGTT	NA	False	NA	NA	False	ATTAAA	-35	NA	71067943	71035328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_71035797_71037506_71037547_71041521_71041625_71042180_71042285_71045443_71045508_71048005_71048114_71048761_71048850_71049067_71049159_71055351_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71067654
transcript_160093.nic	chr5	-	1025	8	ISM	ENSG00000145736.14	ENST00000522654.5	1106	10	-19	6941	-4	0	5prime_fragment	FALSE	canonical	3	230	junction_7	157.878666923013	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAACATTTATTAATTTAT	NA	False	NA	15	True	AATATA	-31	NA	71067693	71055029	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71067493
transcript_160095.known	chr5	-	860	8	FSM	ENSG00000145736.14	ENST00000523003.5	860	8	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_7	176.981378012675	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAACATTTATTAATTTAT	NA	False	NA	15	True	AATATA	-31	NA	71067689	71055029	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71067654
transcript_160099.nic	chr5	+	3222	17	ISM	ENSG00000145734.20	ENST00000508917.6	7194	32	-71	35426	-36	-1299	5prime_fragment	FALSE	canonical	3	19	junction_13	6.14886930662866	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGGAAGAAGAAAAATATCC	NA	False	NA	NA	False	AATAGA	-18	NA	71455614	71510051	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_71456090_71458578_71458856_71461816_71461927_71464057_71464118_71466095_71466222_71467353_71467488_71470394_71470490_71483841_71483897_71486483_71486628_71489403_71489683_71490983_71491132_71495249_71495409_71497269_71497427_71501561_71501654_71502598_71502792_71504620_71504752_71509464
transcript_1601.nic	chr1	+	3301	14	NIC	ENSG00000130762.15	novel	2822	15	NA	NA	-82	0	intron_retention	FALSE	canonical	3	82	junction_1	16.9094350610196	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGATTTTCACAGTGACT	3452766	True	NA	9	True	ATTAAA	-16	NA	3454582	3481113	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_3454812_3463065_3463673_3466147_3466194_3467167_3467338_3468879_3468937_3469432_3469594_3473077_3473231_3473392_3473523_3474707_3474783_3475969_3476063_3477874_3478613_3479516_3479591_3479811_3479914_3480447
transcript_160101.nic	chr5	+	1653	10	ISM	ENSG00000145734.20	ENST00000508917.6	7194	32	-71	55897	-36	-21770	5prime_fragment	FALSE	canonical	3	22	junction_5	4.56503079648314	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGAGGAAGAAGCAAGAT	NA	False	NA	37	True	AAGAAA	-2	NA	71455614	71489580	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_71456090_71458578_71458856_71461816_71461927_71464057_71464118_71466095_71466222_71467353_71467488_71470394_71470490_71483841_71483897_71486483_71486628_71489403
transcript_160103.nic	chr5	+	1468	9	ISM	ENSG00000145734.20	ENST00000508917.6	7194	32	-71	58858	-36	-24731	5prime_fragment	FALSE	canonical	3	22	junction_5	4.84122918275927	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAAAGGTATTGATTTTA	NA	False	NA	NA	False	AAGAAA	-21	NA	71455614	71486619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_71456090_71458578_71458856_71461816_71461927_71464057_71464118_71466095_71466222_71467353_71467488_71470394_71470490_71483841_71483897_71486483
transcript_160104.nic	chr5	+	1277	7	ISM	ENSG00000145734.20	ENST00000508917.6	7194	32	-71	74988	-36	-40861	5prime_fragment	FALSE	canonical	3	22	junction_5	4.7169905660283	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAGTAAACCCATCACAT	NA	False	NA	17	True	NA	NA	NA	71455614	71470489	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_71456090_71458578_71458856_71461816_71461927_71464057_71464118_71466095_71466222_71467353_71467488_71470394
transcript_160106.nic	chr5	+	862	3	ISM	ENSG00000145734.20	ENST00000508917.6	7194	32	-71	83551	-36	-49424	5prime_fragment	FALSE	canonical	3	31	junction_1	1	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAAAATTTATTTCTG	NA	False	NA	NA	False	NA	NA	NA	71455614	71461926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_71456090_71458578_71458856_71461816
transcript_160107.nic	chr5	+	665	2	ISM	ENSG00000145734.20	ENST00000508917.6	7194	32	-71	86709	-36	-52582	5prime_fragment	FALSE	canonical	3	31	junction_1	0	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAACAGCCATGCTCAGA	NA	False	NA	-53	True	NA	NA	NA	71455614	71458768	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_71456090_71458578
transcript_160108.nic	chr5	+	752	2	ISM	ENSG00000145734.20	ENST00000508917.6	7194	32	-71	86622	-36	-52495	5prime_fragment	FALSE	canonical	3	31	junction_1	0	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGGAGGAGAATCAGGA	NA	False	NA	34	True	NA	NA	NA	71455614	71458855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_71456090_71458578
transcript_160110.known	chr5	+	3473	17	FSM	ENSG00000131844.17	ENST00000682045.1	3473	17	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	86.4332970778623	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTGTGATATTTAGTA	NA	False	NA	8	True	AATAAA	-17	NA	71586786	71658706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_71586851_71592925_71592993_71596279_71596365_71599658_71599761_71602505_71602634_71604355_71604469_71626639_71626754_71632120_71632186_71634942_71635043_71635150_71635247_71641002_71641076_71643818_71643896_71646210_71646278_71649096_71649254_71650068_71650184_71652668_71652755_71656742
transcript_160112.known	chr5	+	3621	17	FSM	ENSG00000131844.17	ENST00000682727.1	3621	17	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_11	107.146639442168	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAAATGTTTTCCTAATA	NA	False	NA	-30	True	AATAGA	-3	NA	71587295	71658668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_71587555_71592925_71592993_71596279_71596365_71599658_71599761_71602505_71602634_71604355_71604469_71626639_71626754_71632120_71632186_71634942_71635043_71635150_71635247_71636103_71636168_71643818_71643896_71646210_71646278_71649096_71649254_71650068_71650184_71652668_71652755_71656742
transcript_160114.known	chr5	+	3685	17	FSM	ENSG00000131844.17	ENST00000683882.1	3685	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	86.9615351391062	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAAAGTCAATATTTCAA	NA	False	NA	-15	True	AATAGA	-18	NA	71587303	71658683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_71587555_71592925_71592993_71596279_71596365_71599658_71599761_71602505_71602634_71604355_71604469_71626639_71626754_71632120_71632186_71634942_71635043_71635150_71635247_71641002_71641076_71643770_71643896_71646210_71646278_71649096_71649254_71650068_71650184_71652668_71652755_71656742
transcript_160115.known	chr5	+	3624	17	FSM	ENSG00000131844.17	ENST00000340941.11	3624	17	0	0	0	0	multi-exon	FALSE	canonical	2	164	junction_12	49.0763117501713	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTGTGATATTTAGTA	NA	False	NA	8	True	AATAAA	-17	NA	71587339	71658706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_71587555_71592925_71592993_71596279_71596365_71599658_71599761_71602505_71602634_71604355_71604469_71626639_71626754_71632120_71632186_71634942_71635043_71635150_71635247_71641002_71641076_71643818_71643896_71646210_71646278_71649096_71649254_71650068_71650184_71652668_71652755_71656742
transcript_160123.known	chr5	+	3574	16	FSM	ENSG00000131844.17	ENST00000683789.1	3574	16	0	0	0	0	multi-exon	FALSE	canonical	2	120	junction_6	65.7590213498413	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTGTGATATTTAGTA	NA	False	NA	8	True	AATAAA	-17	NA	71587275	71658706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_71587555_71592925_71592993_71596279_71596365_71599658_71599761_71602505_71602634_71604355_71604469_71632120_71632186_71634942_71635043_71635150_71635247_71641002_71641076_71643818_71643896_71646210_71646278_71649096_71649254_71650068_71650184_71652668_71652755_71656742
transcript_160128.known	chr5	+	3556	16	FSM	ENSG00000131844.17	ENST00000684254.1	3556	16	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_1	84.6321189357537	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAAATGTTTTCCTAATA	NA	False	NA	-30	True	AATAGA	-3	NA	71587302	71658668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_71587555_71596279_71596365_71599658_71599761_71602505_71602634_71604355_71604469_71626639_71626754_71632120_71632186_71634942_71635043_71635150_71635247_71641002_71641076_71643818_71643896_71646210_71646278_71649096_71649254_71650068_71650184_71652668_71652755_71656742
transcript_160134.known	chr5	+	11790	7	FSM	ENSG00000131711.15	ENST00000296755.12	11790	7	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_6	31.4360020076062	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCATGTGTGTGCTGTGCT	72096259	True	NA	17	True	AATAAA	-18	NA	72107474	72209565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_72107716_72115697_72115800_72183742_72183826_72186613_72186755_72193865_72200368_72203562_72203802_72205083
transcript_160143.known	chr5	-	1369	12	FSM	ENSG00000113048.17	ENST00000513900.5	1369	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	287.613520527257	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAACAGCCTCAGCTTCC	-72308736	True	NA	NA	False	NA	NA	NA	72320231	72220836	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_72221149_72223682_72223851_72226056_72226200_72228265_72228369_72232442_72232559_72234118_72234198_72238013_72238129_72241646_72241689_72295530_72295590_72297631_72297703_72314080_72314159_72320148
transcript_160149.known	chr5	-	2770	11	FSM	ENSG00000113048.17	ENST00000261413.10	2770	11	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_5	47.3184953268804	1390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTGCCACCACTAATATT	-72308745	True	NA	NA	False	ATTAAA	-25	NA	72320240	72219402	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_72221149_72223682_72223851_72226056_72226200_72228265_72228369_72232442_72232559_72234118_72234198_72238013_72238129_72295530_72295590_72297631_72297703_72314080_72314159_72320148
transcript_160150.known	chr5	-	2628	11	FSM	ENSG00000113048.17	ENST00000457646.8	2628	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	226.464323901139	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGTGTACTCTTTATCT	-72308760	True	NA	-9	True	AATAAA	-14	NA	72320255	72219527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_72221149_72223682_72223851_72226056_72226200_72228265_72228369_72232442_72232559_72234118_72234198_72238013_72238129_72295530_72295590_72297631_72297703_72314080_72314159_72320180
transcript_160153.nnic	chr5	-	2718	11	NNC	ENSG00000113048.17	novel	2770	11	NA	NA	-7	0	intron_retention	FALSE	canonical	2	14	junction_2	225.514877558001	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGTGTACTCTTTATCT	-72308752	True	NA	-9	True	AATAAA	-14	NA	72320247	72219527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_72221149_72223682_72223917_72226056_72226200_72228265_72228369_72232442_72232559_72234118_72234198_72238013_72238129_72295530_72295590_72297631_72297703_72314080_72314159_72320148
transcript_160165.known	chr5	-	504	4	FSM	ENSG00000113048.17	ENST00000522095.1	504	4	0	0	0	0	multi-exon	FALSE	canonical	3	776	junction_2	7.40870359029762	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGGTTGTTCTCTTTTTTG	-72308733	True	NA	NA	False	TTTAAA	-23	NA	72320228	72295314	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_72295590_72297631_72297703_72314080_72314159_72320148
transcript_160167.known	chr5	-	486	5	FSM	ENSG00000113048.17	ENST00000520285.5	486	5	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	338.099467612713	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATCTGTCAGAATTGTAC	-72308696	True	NA	NA	False	AATAAA	-15	NA	72320191	72294553	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_72294789_72295530_72295590_72297631_72297703_72314080_72314159_72320148
transcript_160170.known	chr5	+	2195	11	FSM	ENSG00000049883.15	ENST00000308077.9	2195	11	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_10	30.0958468895627	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTGGATTTCTCCACTT	72318493	True	NA	NA	False	NA	NA	NA	72320372	72360225	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_72320510_72322171_72322265_72326611_72326742_72331257_72331376_72335017_72335097_72335793_72335886_72338621_72338736_72342961_72343037_72352640_72352755_72358202_72358824_72359603
transcript_160171.known	chr5	+	11145	10	FSM	ENSG00000049883.15	ENST00000380639.10	11145	10	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_5	11.4514541639538	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCTCCTTGAATT	72318493	True	NA	3	True	AATAAA	-15	NA	72320372	72368395	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_72320510_72322171_72322265_72326611_72326742_72331257_72331376_72335017_72335097_72335793_72335886_72338621_72338736_72342961_72343037_72352640_72352755_72358202
transcript_160177.known	chr5	+	1653	7	FSM	ENSG00000049883.15	ENST00000503868.5	1653	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	37.77307977324	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTATTTGTTAATGATTT	72318496	True	NA	14	True	AATAAA	-19	NA	72320375	72359233	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_72320510_72322171_72322265_72335793_72335886_72338621_72338736_72342961_72343037_72352640_72352755_72358202
transcript_160178.known	chr5	+	8489	25	FSM	ENSG00000083312.19	ENST00000337273.10	8489	25	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	41.2697553704082	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTGCACTCTGATTTTT	72813801	True	NA	10	True	AATAAA	-15	NA	72816660	72914388	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_72816753_72848384_72848499_72851243_72851320_72855773_72855924_72861807_72861915_72865595_72865730_72872638_72872721_72875614_72875738_72877227_72877347_72882466_72882528_72883063_72883233_72887069_72887223_72888077_72888304_72889785_72889958_72891809_72891897_72893138_72893247_72893376_72893536_72893615_72893704_72896457_72896557_72897055_72897152_72900005_72900082_72900973_72901074_72903708_72903784_72905302_72905446_72908708
transcript_160181.known	chr5	+	3028	25	FSM	ENSG00000083312.19	ENST00000506351.6	3028	25	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	22.2573333732702	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATCTATTCAGTCT	72836821	True	NA	25	True	NA	NA	NA	72848183	72908951	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_72848252_72848384_72848499_72851243_72851320_72855773_72855924_72861807_72861915_72865595_72865730_72872638_72872721_72875614_72875738_72877227_72877347_72882466_72882528_72883063_72883233_72887069_72887223_72888077_72888304_72889785_72889958_72891809_72891897_72893138_72893247_72893376_72893536_72893615_72893704_72896457_72896557_72897055_72897152_72900005_72900082_72900973_72901074_72903708_72903784_72905302_72905446_72908708
transcript_160189.known	chr5	+	11040	24	FSM	ENSG00000083312.19	ENST00000680533.1	11040	24	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_23	59.3212713325851	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTAAATGTTTGCAAACA	NA	False	NA	15	True	AATAAA	-20	NA	72816311	72916733	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_72816753_72848384_72848499_72851243_72851320_72855773_72855924_72861807_72861915_72865595_72865730_72872638_72872721_72875614_72875738_72877227_72877347_72882466_72882528_72883063_72883233_72887069_72887223_72888077_72888304_72889785_72889958_72891809_72891897_72893138_72893247_72893376_72893536_72893615_72893704_72896457_72896557_72897055_72897152_72900005_72900082_72900973_72901074_72903708_72903784_72908708
transcript_160193.nic	chr5	+	3030	24	ISM	ENSG00000083312.19	ENST00000506351.6	3028	25	-110	3371	-47	0	5prime_fragment	FALSE	canonical	3	179	junction_1	22.7353475945662	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGGGCTTTAAATTTAAA	72836711	True	NA	40	True	AATAAA	-22	NA	72848073	72905580	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_72848252_72848384_72848499_72851243_72851320_72855773_72855924_72861807_72861915_72865595_72865730_72872638_72872721_72875614_72875738_72877227_72877347_72882466_72882528_72883063_72883233_72887069_72887223_72888077_72888304_72889785_72889958_72891809_72891897_72893138_72893247_72893376_72893536_72893615_72893704_72896457_72896557_72897055_72897152_72900005_72900082_72900973_72901074_72903708_72903784_72905302
transcript_160196.known	chr5	+	8412	24	FSM	ENSG00000083312.19	ENST00000679378.1	8412	24	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_19	46.7755368826658	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAGTTGTTTAACTATA	72836758	True	NA	-10	True	AATAGA	-31	NA	72848120	72914368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_72848252_72848384_72848499_72851243_72851320_72855773_72855924_72861807_72861915_72865595_72865730_72872638_72872721_72875614_72875738_72877227_72877347_72882466_72882528_72883063_72883233_72887069_72887223_72888077_72888304_72889785_72889958_72891809_72891897_72893138_72893247_72893376_72893536_72893615_72893704_72896457_72896557_72900005_72900082_72900973_72901074_72903708_72903784_72905302_72905446_72908708
transcript_160218.known	chr5	+	4921	26	FSM	ENSG00000157107.14	ENST00000430046.7	4921	26	0	0	0	0	multi-exon	TRUE	canonical	3	61	junction_6	11.8655130525401	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATTGGTTTATGTGTCTT	72954111	True	NA	7	True	AATAAA	-19	NA	72956040	73090522	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_72956130_72968497_72968590_72989426_72989502_72990477_72990620_72990711_72990865_73006444_73006550_73015625_73015725_73017211_73017309_73034656_73034702_73037142_73037216_73041290_73041316_73051348_73051407_73052331_73052508_73054159_73054172_73054524_73054550_73056064_73056108_73058432_73058525_73063840_73063945_73068649_73068780_73074741_73074854_73077337_73077494_73078179_73078313_73081782_73081983_73082760_73082826_73087588_73087754_73088067
transcript_160219.known	chr5	+	1287	11	FSM	ENSG00000157107.14	ENST00000287761.7	1287	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	26.8158535198863	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTTTAGATTAGCTAAC	72954141	True	NA	NA	False	AATAAA	-41	NA	72956070	73038123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_72956130_72968497_72968590_72989426_72989502_72990477_72990620_72990711_72990865_73006444_73006550_73015625_73015725_73017211_73017309_73034656_73034702_73037142_73037216_73037776
transcript_160220.known	chr5	+	1244	4	FSM	ENSG00000157111.13	ENST00000454765.7	1244	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	5.43650214343336	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTATATTCTGACTTTC	73120450	True	NA	4	True	AATAAA	-14	NA	73120574	73131809	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_73120697_73123305_73124014_73128389_73128532_73131537
transcript_160221.known	chr5	-	744	1	FSM	ENSG00000272525.1	ENST00000607001.1	744	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGGTCTTAACCATGAA	-73498147	True	NA	-2	True	AATAAA	-21	NA	73498293	73497549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_73497500_73498300
transcript_160224.known	chr5	+	897	6	FSM	ENSG00000145741.17	ENST00000335895.12	897	6	0	0	0	0	multi-exon	FALSE	canonical	3	5451	junction_1	269.894053287582	1912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTTTATTTTTTTATT	73423263	True	NA	31	True	AATAAA	-16	NA	73498407	73505495	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_73498559_73499133_73499203_73502487_73502602_73502915_73503118_73504346_73504404_73505191
transcript_160227.known	chr5	+	1237	6	FSM	ENSG00000145741.17	ENST00000380591.8	1276	6	7	32	7	-32	multi-exon	FALSE	canonical	3	613	junction_1	2159.07133740412	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGGTGGTATAAAGTTCT	73423304	True	NA	-26	True	ATTAAA	-26	NA	73498448	73505635	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_73498800_73499133_73499203_73502487_73502602_73502915_73503118_73504346_73504404_73505191
transcript_160229.known	chr5	+	740	5	FSM	ENSG00000145741.17	ENST00000678135.1	740	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2635.04339385521	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCGAAGAAGCCTGGGAAT	73423291	True	NA	-29	True	NA	NA	NA	73498435	73505435	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_73498559_73502487_73502602_73502915_73503118_73504346_73504404_73505191
transcript_16023.known	chr1	-	4106	14	FSM	ENSG00000132716.19	ENST00000368073.7	4106	14	0	0	0	0	multi-exon	TRUE	canonical	3	83	junction_13	180.162057226002	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTGGTATGTGGTC	-160250424	True	NA	-29	True	AGTAAA	-22	NA	160262451	160215714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160261284_160261359_160262116
transcript_160230.known	chr5	+	2165	4	FSM	ENSG00000145741.17	ENST00000679077.1	2165	4	0	0	0	0	multi-exon	FALSE	canonical	3	613	junction_1	2481.67582268291	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTAATAAAGTTCTTTGC	73423312	True	NA	5	True	NA	NA	NA	73498456	73505469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_73498800_73499133_73499203_73502487_73503118_73504346
transcript_160231.known	chr5	+	2959	2	FSM	ENSG00000145741.17	ENST00000510787.6	2959	2	0	0	0	0	multi-exon	FALSE	canonical	3	5451	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGGTGGTGCCTGTAAT	73423347	False	NA	NA	False	AATACA	-12	NA	73498491	73502025	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_73498559_73499133
transcript_160232.known	chr5	+	887	2	FSM	ENSG00000145741.17	ENST00000512257.1	887	2	0	0	0	0	multi-exon	FALSE	canonical	3	613	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACGGGTACATTTTGGAGT	73423286	True	NA	NA	False	ACTAAA	-41	NA	73498430	73499651	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_73498800_73499133
transcript_160233.known	chr5	+	5096	13	FSM	ENSG00000164338.10	ENST00000296792.9	5096	13	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_8	11.1314743957044	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAGAGAGAAACCATCTT	73562089	True	NA	15	True	AATAAA	-29	NA	73565742	73583380	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_73565913_73567261_73567435_73568234_73568328_73568419_73568605_73569496_73569676_73570585_73570712_73572488_73572625_73576951_73577037_73577855_73578006_73578750_73578853_73579016_73579151_73579316_73579376_73579876
transcript_16024.known	chr1	-	3972	14	FSM	ENSG00000132716.19	ENST00000326837.6	3972	14	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_13	185.811509761272	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTGGTATGTGGTC	-160250449	True	NA	-29	True	AGTAAA	-22	NA	160262476	160215714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160261284_160261359_160262275
transcript_160240.known	chr5	-	2161	9	FSM	ENSG00000164331.10	ENST00000296785.8	2161	9	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_6	9.25253343684853	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTGTCATTTCTAGAAG	-73564585	True	NA	NA	False	AATAAA	-24	NA	73565639	73552189	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_73552853_73553405_73553487_73554321_73554389_73554860_73554987_73555487_73555586_73557574_73557641_73561129_73561289_73562592_73562986_73565131
transcript_160244.known	chr5	-	2993	21	FSM	ENSG00000164347.18	ENST00000296805.8	2993	21	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_11	21.7146839719117	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGCTGTGGCCTTTTTCC	-74761993	True	NA	-3	True	AATAAA	-16	NA	74767117	74721205	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_74721784_74722378_74722562_74725639_74725756_74725940_74726127_74730259_74730399_74733021_74733099_74736795_74736986_74738317_74738418_74738501_74738643_74739988_74740138_74741528_74741610_74745677_74745858_74746104_74746166_74747691_74747781_74750578_74750668_74751367_74751494_74758848_74758947_74759368_74759427_74760901_74760987_74763679_74763767_74766937
transcript_160248.known	chr5	-	2856	20	FSM	ENSG00000164347.18	ENST00000345239.6	2856	20	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_8	62.8801788921352	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGCTGTGGCCTTTTTCC	-74761997	True	NA	-3	True	AATAAA	-16	NA	74767121	74721205	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_74721784_74722378_74722562_74725639_74725756_74725940_74726127_74730259_74730399_74733021_74733099_74736795_74736986_74738317_74738418_74739988_74740138_74741528_74741610_74745677_74745858_74746104_74746166_74747691_74747781_74750578_74750668_74751367_74751494_74758848_74758947_74759368_74759427_74760901_74760987_74763679_74763767_74766937
transcript_16025.known	chr1	-	3867	14	FSM	ENSG00000132716.19	ENST00000368074.6	3867	14	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_13	182.788881357508	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCTCTGTGTGGTATG	-160250522	True	NA	-34	True	AGTAAA	-17	NA	160262549	160215719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160261284_160261359_160262448
transcript_160255.known	chr5	+	1812	14	FSM	ENSG00000049860.14	ENST00000261416.12	1812	14	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_1	40.6172785106224	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGACCCTCTATCTTAT	74680655	True	NA	30	True	AATAAA	-19	NA	74685232	74721288	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_74685560_74689327_74689474_74693638_74693705_74696692_74696740_74696995_74697107_74705218_74705321_74713505_74713636_74715509_74715691_74716586_74716674_74718290_74718364_74718796_74718972_74720427_74720519_74720642_74720748_74721117
transcript_160259.nic	chr5	+	1814	13	NIC	ENSG00000049860.14	novel	1812	14	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_8	126.805926736709	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGACCCTCTATCTTAT	74680566	True	NA	30	True	AATAAA	-19	NA	74685143	74721288	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_74685560_74689327_74689474_74693638_74693705_74696692_74696740_74696995_74697107_74705218_74705321_74713505_74713636_74715509_74715691_74718290_74718364_74718796_74718972_74720427_74720519_74720642_74720748_74721117
transcript_160262.known	chr5	-	6118	13	FSM	ENSG00000198780.13	ENST00000389156.9	6118	13	0	0	0	0	multi-exon	TRUE	canonical	3	44	junction_12	54.583969461942	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGTGATTATAGATTAAT	-74865690	True	NA	-1	True	AATAAA	-14	NA	74866966	74777573	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_74782009_74782930_74783135_74796029_74796187_74800879_74801031_74801589_74801630_74804492_74804606_74805155_74805285_74813839_74814020_74834425_74834598_74838964_74839051_74840073_74840174_74841544_74841680_74866750
transcript_160267.nic	chr5	-	4269	13	FSM	ENSG00000198780.13	ENST00000687041.1	6125	13	-192	2048	-192	-2046	multi-exon	FALSE	canonical	3	160	junction_12	30.2052009870265	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGACTACTATTAGTGAA	-74866556	False	NA	NA	False	AGTAAA	-10	NA	74866579	74779621	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_74782009_74782930_74783135_74796029_74796187_74800879_74801031_74801589_74801630_74804492_74804606_74805155_74805285_74813839_74814020_74834425_74834598_74838964_74839051_74840073_74840174_74841544_74841680_74866164
transcript_160274.nic	chr5	-	2771	13	FSM	ENSG00000198780.13	ENST00000687041.1	6125	13	-41	3395	-41	-3393	multi-exon	FALSE	canonical	3	160	junction_12	30.2052009870265	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAACTTCAAGTAAATGAG	-74864234	True	NA	NA	False	AATAAA	-11	NA	74866428	74780968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_74782009_74782930_74783135_74796029_74796187_74800879_74801031_74801589_74801630_74804492_74804606_74805155_74805285_74813839_74814020_74834425_74834598_74838964_74839051_74840073_74840174_74841544_74841680_74866164
transcript_160282.known	chr5	-	5908	12	FSM	ENSG00000198780.13	ENST00000510609.5	5908	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	62.7666543043516	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTGGTGATTATAGATTA	-74864150	True	NA	-3	True	AATAAA	-12	NA	74866344	74777575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_74782009_74782930_74783135_74796029_74796187_74800879_74801031_74801589_74801630_74804492_74804606_74805155_74805285_74813839_74814020_74838964_74839051_74840073_74840174_74841544_74841680_74866164
transcript_160307.known	chr5	+	1684	6	FSM	ENSG00000049860.14	ENST00000513079.5	1684	6	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_1	48.5740671552218	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGTTGTTTTGAATAAAA	74680618	True	NA	-8	True	NA	NA	NA	74685195	74706168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_74685560_74689327_74689474_74693638_74693705_74696692_74696740_74696995_74697107_74705218
transcript_160308.known	chr5	+	4337	6	FSM	ENSG00000164346.10	ENST00000610426.5	4337	6	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_5	24.071559982685	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCAGTGTTTTTTTTCTTC	74761718	True	NA	NA	False	AATAAA	-16	NA	74767248	74780113	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_74767364_74768930_74769119_74769213_74769365_74770630_74770811_74773867_74774061_74776603
transcript_160309.known	chr5	+	1199	5	FSM	ENSG00000164346.10	ENST00000296802.9	1199	5	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_4	204.822484117345	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCTGCATTTGTGAGTG	NA	False	NA	20	True	AATATA	-19	NA	74766990	74776910	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_74767364_74768930_74769119_74769213_74769365_74770630_74770811_74776603
transcript_160313.known	chr5	-	5657	4	FSM	ENSG00000171617.15	ENST00000618628.4	5657	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGGGTCTTCATTTG	-74641414	False	NA	3	True	AATAAA	-25	NA	74641424	74627405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_74629993_74634683_74636499_74637564_74637702_74640306
transcript_160314.known	chr5	+	645	3	FSM	ENSG00000164346.10	ENST00000514918.5	645	3	0	0	0	0	multi-exon	FALSE	canonical	3	469	junction_1	17.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTTATTAGAATG	74761717	True	NA	NA	False	AATAAA	-42	NA	74767247	74769554	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_74767364_74768930_74769119_74769213
transcript_160317.known	chr5	-	4821	3	FSM	ENSG00000171617.15	ENST00000302351.9	4821	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.5	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGTGTGGGTCTTCAT	-74639794	True	NA	0	True	AATAAA	-22	NA	74640728	74627408	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_74629993_74634683_74636499_74640306
transcript_160320.known	chr5	-	3047	22	FSM	ENSG00000164347.18	ENST00000509430.5	3047	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	80.9871073975719	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTCTAATATCTTATTTTA	-74761981	True	NA	-5	True	AATAAA	-19	NA	74767105	74721257	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_74721784_74722378_74722562_74725639_74725756_74725940_74726127_74730259_74730399_74733021_74733099_74736795_74736986_74738317_74738418_74738501_74738643_74739988_74740138_74741528_74741610_74745677_74745858_74746104_74746166_74747691_74747781_74750578_74750668_74751367_74751494_74758848_74758947_74759368_74759427_74760901_74760987_74763679_74763767_74765034_74765153_74766937
transcript_160321.known	chr5	+	797	5	FSM	ENSG00000164346.10	ENST00000513356.1	797	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	215.611195210267	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTAACACTGTGAAACCC	74761732	True	NA	NA	False	NA	NA	NA	74767262	74771653	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_74767364_74768930_74769119_74769213_74769365_74770630_74770811_74771476
transcript_160322.known	chr5	+	876	2	FSM	ENSG00000049860.14	ENST00000515528.1	876	2	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTTTATATCATGCTT	74680628	True	NA	NA	False	NA	NA	NA	74685205	74689849	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_74685560_74689327
transcript_160323.known	chr5	-	8012	18	FSM	ENSG00000113163.19	ENST00000644072.2	8012	18	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_7	35.4502429213594	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTTTACTGTGGTTCT	-75506894	True	NA	-1	True	AATAAA	-22	NA	75511629	75368485	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_75374192_75379336_75379474_75381071_75381202_75381948_75382078_75384641_75384713_75385901_75386035_75389591_75389688_75399309_75399388_75400204_75400298_75402971_75403059_75411010_75411104_75416875_75417034_75419340_75419425_75425360_75425500_75426370_75426479_75459064_75459182_75505981_75506117_75511111
transcript_160326.known	chr5	-	2036	17	FSM	ENSG00000113163.19	ENST00000642809.1	2036	17	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	37.5541276027017	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAAATAAAGCGAGCTTT	-75511281	False	NA	-33	True	AATATA	-43	NA	75511302	75368517	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_75368659_75379336_75379474_75381071_75381202_75381948_75382078_75384641_75384713_75385901_75386035_75389591_75389688_75400204_75400292_75402971_75403059_75411010_75411104_75416875_75417034_75419340_75419425_75425360_75425500_75426370_75426479_75459064_75459182_75505981_75506117_75511111
transcript_160329.known	chr5	-	3154	17	FSM	ENSG00000113163.19	ENST00000645483.1	3154	17	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	13.5945761243225	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTGAGTTTGACATTT	-75506898	True	NA	NA	False	TTTAAA	-6	NA	75511633	75373269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_75374192_75379336_75379474_75381071_75381202_75381948_75382078_75384641_75384713_75385901_75386035_75389591_75389688_75400204_75400298_75402971_75403059_75411010_75411104_75416875_75417034_75419340_75419425_75425360_75425500_75426370_75426479_75459064_75459182_75505981_75506117_75511111
transcript_160331.known	chr5	-	3868	17	FSM	ENSG00000113163.19	ENST00000643780.2	3868	17	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	36.1951632645855	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGTAAAATTTACCCTGT	-75506894	True	NA	NA	False	AATAAA	-30	NA	75511629	75377774	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_75379474_75381071_75381202_75381948_75382078_75384641_75384713_75385901_75386035_75389591_75389688_75399309_75399388_75400204_75400298_75402971_75403059_75411010_75411104_75416875_75417034_75419340_75419425_75425360_75425500_75426370_75426479_75459064_75459182_75505981_75506117_75511111
transcript_160334.known	chr5	-	3720	16	FSM	ENSG00000113163.19	ENST00000645866.1	3720	16	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_9	32.6228277267451	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATAATCTTTTCTATTTT	-75506885	True	NA	NA	False	TATAAA	-37	NA	75511620	75372597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_75374192_75379336_75379474_75381071_75381202_75381948_75382078_75384641_75384713_75385901_75386035_75389591_75389688_75400204_75400298_75402971_75403059_75416875_75417034_75419340_75419425_75425360_75425500_75426370_75426479_75459064_75459182_75505981_75506117_75511111
transcript_160336.known	chr5	-	3056	16	FSM	ENSG00000113163.19	ENST00000646511.1	3056	16	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_6	11.3970756483114	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTGAGTTGGTTCCATA	-75506903	True	NA	NA	False	NA	NA	NA	75511638	75378517	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_75379474_75381071_75381202_75381948_75382078_75384641_75384713_75385901_75386035_75389591_75389688_75400204_75400298_75402971_75403059_75411010_75411104_75416875_75417034_75419340_75419425_75425360_75425500_75426370_75426479_75459064_75459182_75505981_75506117_75511111
transcript_160339.known	chr5	-	1327	8	FSM	ENSG00000113163.19	ENST00000646302.1	1327	8	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_2	10.5346851797638	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTATAAAGGAAAAATCTGAG	-75511262	False	NA	NA	False	CATAAA	-7	NA	75511283	75410689	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_75411104_75416875_75417034_75419340_75419425_75425360_75425500_75426370_75426479_75459064_75459182_75505981_75506117_75511111
transcript_160340.nic	chr5	-	1275	7	ISM	ENSG00000113163.19	ENST00000646302.1	1327	8	-361	6185	-6	136	5prime_fragment	FALSE	canonical	3	118	junction_1	11.0817668065862	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGACTAGGTTTTTTTCCT	-75506909	True	NA	0	True	NA	NA	NA	75511644	75416874	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_75417034_75419340_75419425_75425360_75425500_75426370_75426479_75459064_75459182_75505981_75506117_75511111
transcript_160341.known	chr5	-	1413	2	FSM	ENSG00000113163.19	ENST00000647127.2	1413	2	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAACCTCGACCTCCCAG	-75506902	True	NA	NA	False	NA	NA	NA	75511637	75505229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_75506117_75511111
transcript_160349.known	chr5	+	4530	20	FSM	ENSG00000113161.17	ENST00000287936.9	4530	20	0	0	0	0	multi-exon	TRUE	canonical	3	584	junction_7	67.6738143771619	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGTAAGCAGTAACCTT	75325515	True	NA	76	True	AGTAAA	-25	NA	75337219	75362101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_75337301_75342582_75342771_75343852_75343965_75344244_75344333_75345573_75345659_75347203_75347310_75350041_75350149_75350257_75350375_75350788_75350950_75351067_75351316_75351423_75351603_75354502_75354698_75355055_75355215_75355364_75355523_75356342_75356449_75358656_75358828_75359169_75359311_75359397_75359557_75359984_75360140_75360287
transcript_160362.known	chr5	+	3681	19	FSM	ENSG00000113161.17	ENST00000343975.9	3681	19	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_12	160.337491283577	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAGCCTGGGCCAGAGAA	75325527	True	NA	NA	False	AATAAA	-26	NA	75337231	75361423	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_75337301_75342582_75342771_75343852_75343965_75344244_75344333_75345573_75345659_75347203_75347310_75350041_75350149_75350257_75350375_75350788_75350950_75351067_75351316_75351423_75351603_75354502_75354698_75355364_75355523_75356342_75356449_75358656_75358828_75359169_75359311_75359397_75359557_75359984_75360140_75360287
transcript_160375.known	chr5	+	5911	15	FSM	ENSG00000122008.15	ENST00000241436.8	5911	15	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	4.29047354790892	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTTTCGTTAACAAGATG	75511727	False	NA	6	True	AATAAA	-20	NA	75511755	75601144	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_75511915_75547009_75547158_75552471_75552592_75569339_75569493_75573737_75573870_75576779_75576934_75581208_75581449_75583292_75583418_75584759_75584927_75587025_75587059_75590343_75590441_75593877_75594050_75596221_75597179_75597746_75597790_75597933
transcript_160383.known	chr5	-	2185	12	FSM	ENSG00000152359.15	ENST00000428202.7	2185	12	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_7	8.49987846291331	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTATAAAACACTAAATCAT	-75715858	True	NA	NA	False	TATAAA	-14	NA	75717437	75674123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_75674579_75677773_75677951_75685206_75685485_75689011_75689166_75690382_75690563_75692395_75692501_75694654_75694832_75702604_75702811_75705703_75705788_75707736_75707876_75712853_75712952_75717305
transcript_160387.known	chr5	+	5808	36	FSM	ENSG00000145703.17	ENST00000274364.11	5808	36	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_12	47.0240581066365	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTTTTAAGTTGTCTT	76396098	True	NA	25	True	AATAAA	-20	NA	76403284	76708132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_76403592_76461569_76461670_76562395_76562553_76570579_76570658_76575692_76575770_76588905_76588974_76589614_76589729_76590407_76590587_76592837_76592926_76597438_76597603_76600811_76600973_76606178_76606304_76611019_76611184_76627409_76627501_76631858_76632027_76637033_76637177_76640932_76641104_76652749_76652834_76654199_76654272_76654933_76655004_76658458_76658668_76665025_76665176_76668680_76668845_76671758_76671984_76673448_76673590_76673951_76674037_76674476_76674710_76677217_76677351_76683114_76683218_76683775_76683918_76693354_76693443_76695453_76695667_76697986_76698148_76701075_76701214_76702481_76702591_76707199
transcript_160389.nic	chr5	+	4677	33	ISM	ENSG00000145703.17	ENST00000274364.11	5808	36	-58	9994	-58	2632	5prime_fragment	FALSE	canonical	3	245	junction_12	35.3066920002427	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAGTAAGTTAAAA	76396040	True	NA	NA	False	CATAAA	-19	NA	76403226	76698138	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_76403592_76461569_76461670_76562395_76562553_76570579_76570658_76575692_76575770_76588905_76588974_76589614_76589729_76590407_76590587_76592837_76592926_76597438_76597603_76600811_76600973_76606178_76606304_76611019_76611184_76627409_76627501_76631858_76632027_76637033_76637177_76640932_76641104_76652749_76652834_76654199_76654272_76654933_76655004_76658458_76658668_76665025_76665176_76668680_76668845_76671758_76671984_76673448_76673590_76673951_76674037_76674476_76674710_76677217_76677351_76683114_76683218_76683775_76683918_76693354_76693443_76695453_76695667_76697986
transcript_160392.nic	chr5	+	2883	22	ISM	ENSG00000145703.17	ENST00000274364.11	5808	36	-67	43081	-67	0	5prime_fragment	FALSE	canonical	3	245	junction_12	24.4869348290933	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAACAAGAAAAAAGGAGGAG	76396031	True	NA	NA	False	AGTAAA	-6	NA	76403217	76665051	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_76403592_76461569_76461670_76562395_76562553_76570579_76570658_76575692_76575770_76588905_76588974_76589614_76589729_76590407_76590587_76592837_76592926_76597438_76597603_76600811_76600973_76606178_76606304_76611019_76611184_76627409_76627501_76631858_76632027_76637033_76637177_76640932_76641104_76652749_76652834_76654199_76654272_76654933_76655004_76658458_76658668_76665025
transcript_160399.nic	chr5	+	1620	8	ISM	ENSG00000145703.17	ENST00000274364.11	5808	36	-561	117567	-561	-10313	5prime_fragment	FALSE	canonical	3	291	junction_5	17.7993350024829	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAAATGCAAGACTGAA	NA	False	NA	NA	False	AAAAAG	-7	NA	76402723	76590565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_76403592_76461569_76461670_76562395_76562553_76570579_76570658_76575692_76575770_76588905_76588974_76589614_76589729_76590407
transcript_160401.nic	chr5	+	904	7	ISM	ENSG00000145703.17	ENST00000274364.11	5808	36	-91	118492	-91	-11238	5prime_fragment	FALSE	canonical	3	291	junction_5	17.5949803447839	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTTGAGAAATATGGAAT	76403123	False	NA	NA	False	NA	NA	NA	76403193	76589640	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_76403592_76461569_76461670_76562395_76562553_76570579_76570658_76575692_76575770_76588905_76588974_76589614
transcript_160405.known	chr5	+	3727	2	FSM	ENSG00000181104.7	ENST00000319211.5	3727	2	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTTTGGAACAAATTAGT	76713722	True	NA	NA	False	AATAAA	-20	NA	76716125	76735770	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_76716396_76732313
transcript_160408.known	chr5	+	2861	2	FSM	ENSG00000164251.5	ENST00000296677.5	2861	2	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	0	206	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTTGTGCGTTTGT	76815789	True	NA	10	True	TATAAA	-25	NA	76819029	76835315	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_76819265_76832689
transcript_16041.nic	chr1	-	4136	13	NIC	ENSG00000132716.19	novel	4106	14	NA	NA	-11	0	intron_retention	FALSE	canonical	3	99	junction_12	169.491641878491	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCTCTGTGTGGTATG	-160250533	True	NA	-34	True	AGTAAA	-17	NA	160262560	160215719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160262116
transcript_160411.known	chr5	+	4490	14	FSM	ENSG00000164252.13	ENST00000312916.12	4490	14	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_12	11.8940092324372	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGTTTAATCACACTAC	77027613	True	NA	37	True	CATAAA	-22	NA	77030403	77065234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_77030977_77034417_77034521_77035540_77035744_77036555_77036721_77039530_77039720_77046346_77046678_77048160_77048273_77048935_77048988_77052705_77052808_77053964_77054131_77055513_77055597_77059615_77059744_77061702_77061803_77063051
transcript_160418.nic	chr5	+	2105	11	ISM	ENSG00000164252.13	ENST00000312916.12	4490	14	-49	9661	-49	-9661	5prime_fragment	FALSE	canonical	3	123	junction_5	11.1485425056372	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACGAGTAAAATATGGTTTA	NA	False	NA	NA	False	ATTAAA	-6	NA	77030354	77055573	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_77030977_77034417_77034521_77035540_77035744_77036555_77036721_77039530_77039720_77046346_77046678_77048160_77048273_77048935_77048988_77052705_77052808_77053964_77054131_77055513
transcript_160421.nic	chr5	+	1249	5	ISM	ENSG00000164252.13	ENST00000312916.12	4490	14	-49	25548	-49	0	5prime_fragment	FALSE	canonical	3	125	junction_2	8.45576726264388	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCAGATTCTTCTGCAAC	NA	False	NA	NA	False	AGTAAA	-28	NA	77030354	77039686	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_77030977_77034417_77034521_77035540_77035744_77036555_77036721_77039530
transcript_160427.known	chr5	+	1132	4	FSM	ENSG00000250802.7	ENST00000642277.1	1132	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4.49691252107735	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAACATGAACGGGCCATTT	77087510	False	NA	NA	False	AAGAAA	-16	NA	77087556	77148461	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_77087620_77118319_77118522_77139260_77139318_77147651
transcript_160428.known	chr5	+	1691	3	FSM	ENSG00000250802.7	ENST00000512001.6	1691	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGGTATTGTCTCTCTT	77086946	True	NA	NA	False	AATATA	-33	NA	77087013	77148534	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_77087620_77118319_77118522_77147651
transcript_16043.nic	chr1	-	3849	13	NIC	ENSG00000132716.19	novel	3867	14	NA	NA	-56	0	intron_retention	FALSE	canonical	3	95	junction_12	170.206655438486	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCTCTGTGTGGTATG	-160250578	False	NA	-34	True	AGTAAA	-17	NA	160262605	160215719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160262448
transcript_160430.known	chr5	-	6134	3	FSM	ENSG00000132846.6	ENST00000255198.3	6134	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	1	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATGGTAATGAAAGCTT	-77086851	True	NA	NA	False	ATTAAA	-22	NA	77087285	77072071	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_77077896_77078593_77078729_77087110
transcript_160431.known	chr5	-	3678	13	FSM	ENSG00000164253.14	ENST00000296679.9	3678	13	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_2	24.0756908289023	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACATCTTCAGGCTCCAC	-77492287	False	NA	-5	True	ATTAAA	-28	NA	77492316	77430932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_77433288_77436260_77436395_77437335_77437425_77438239_77438362_77440812_77440998_77449759_77449871_77451290_77451354_77453816_77453929_77459061_77459125_77463094_77463227_77464760_77464810_77489456_77489573_77492169
transcript_160437.known	chr5	-	1507	11	FSM	ENSG00000164253.14	ENST00000515253.5	1507	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	77.181668808079	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTAGAAGTTTTATTAT	-77492170	False	NA	1	True	AATAGA	-22	NA	77492199	77432812	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_77433288_77436260_77436395_77437335_77437425_77438239_77438362_77440812_77440998_77453816_77453929_77459061_77459125_77463094_77463227_77464760_77464810_77489456_77489573_77492169
transcript_160438.known	chr5	-	551	5	FSM	ENSG00000171530.15	ENST00000518338.6	551	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	1216.04029538498	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATAAATGAGTTCATCTA	-77732248	True	NA	-55	True	NA	NA	NA	77776261	77691266	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_77691499_77693265_77693353_77705565_77705635_77708241_77708348_77776204
transcript_160439.known	chr5	-	661	4	FSM	ENSG00000171530.15	ENST00000380377.9	661	4	0	0	0	0	multi-exon	FALSE	canonical	3	2412	junction_2	19.7989898732233	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATAATCTGTTAGGTTCTA	-77732326	True	NA	46	True	ATTAAA	-25	NA	77776339	77691165	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_77691499_77693265_77693353_77708241_77708348_77776204
transcript_160440.known	chr5	-	2301	3	FSM	ENSG00000171530.15	ENST00000306388.10	2301	3	0	0	0	0	multi-exon	FALSE	canonical	3	2412	junction_1	21	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATTTTATACTTTAC	-77732274	True	NA	-29	True	AATAAA	-19	NA	77776287	77691240	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_77693353_77708241_77708348_77776204
transcript_160445.known	chr5	-	3980	27	FSM	ENSG00000132842.14	ENST00000255194.11	3980	27	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_16	25.1896945209578	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTTTGCATTTTTAAT	-78290786	True	NA	0	True	AATAAA	-18	NA	78294698	78002325	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_78003056_78015409_78015549_78020691_78020790_78034360_78034446_78039042_78039275_78089392_78089500_78100952_78101026_78110206_78110355_78113751_78113924_78116125_78116235_78128029_78128161_78129120_78129308_78141142_78141320_78156257_78156368_78162818_78162952_78165609_78165673_78175625_78175698_78175783_78175839_78177338_78177437_78181506_78181663_78216054_78216238_78225541_78225609_78227371_78227533_78228143_78228240_78240861_78240937_78267519_78267596_78294451
transcript_160446.nic	chr5	-	2905	23	ISM	ENSG00000132842.14	ENST00000255194.11	3980	27	-48	36788	-48	-18406	5prime_fragment	FALSE	canonical	3	163	junction_12	23.4825414311594	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAGAAAATATCCACATAG	-78290834	True	NA	NA	False	NA	NA	NA	78294746	78039113	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_78039275_78089392_78089500_78100952_78101026_78110206_78110355_78113751_78113924_78116125_78116235_78128029_78128161_78129120_78129308_78141142_78141320_78156257_78156368_78162818_78162952_78165609_78165673_78175625_78175698_78175783_78175839_78177338_78177437_78181506_78181663_78216054_78216238_78225541_78225609_78227371_78227533_78228143_78228240_78240861_78240937_78267519_78267596_78294451
transcript_160449.nic	chr5	-	2565	20	ISM	ENSG00000132842.14	ENST00000255194.11	3980	27	-48	107880	-48	11516	5prime_fragment	FALSE	canonical	3	163	junction_9	23.7646586924804	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAGATTATACATTTGTT	-78290834	True	NA	0	True	NA	NA	NA	78294746	78110205	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_78110355_78113751_78113924_78116125_78116235_78128029_78128161_78129120_78129308_78141142_78141320_78156257_78156368_78162818_78162952_78165609_78165673_78175625_78175698_78175783_78175839_78177338_78177437_78181506_78181663_78216054_78216238_78225541_78225609_78227371_78227533_78228143_78228240_78240861_78240937_78267519_78267596_78294451
transcript_160451.nic	chr5	-	2415	19	ISM	ENSG00000132842.14	ENST00000255194.11	3980	27	-48	111427	-48	7969	5prime_fragment	FALSE	canonical	3	163	junction_8	24.381231397213	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAACTTATTTTGTCAGAA	-78290834	True	NA	NA	False	AAAACA	-40	NA	78294746	78113752	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_78113924_78116125_78116235_78128029_78128161_78129120_78129308_78141142_78141320_78156257_78156368_78162818_78162952_78165609_78165673_78175625_78175698_78175783_78175839_78177338_78177437_78181506_78181663_78216054_78216238_78225541_78225609_78227371_78227533_78228143_78228240_78240861_78240937_78267519_78267596_78294451
transcript_160452.nic	chr5	-	1003	8	ISM	ENSG00000132842.14	ENST00000255194.11	3980	27	-48	179287	-48	-59891	5prime_fragment	FALSE	canonical	3	208	junction_4	14.8653823306612	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGAAGGAAAAGACTGACA	-78290834	True	NA	NA	False	NA	NA	NA	78294746	78181612	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_78181663_78216054_78216238_78225541_78225609_78227371_78227533_78228143_78228240_78240861_78240937_78267519_78267596_78294451
transcript_160454.known	chr5	-	1479	2	FSM	ENSG00000245556.4	ENST00000421004.4	1482	2	0	3	0	-3	multi-exon	FALSE	canonical	3	27	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCCTGCATGTATATTTA	-78360477	False	NA	4	True	ATTAAA	-20	NA	78360507	78358800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_78359986_78360213
transcript_160458.known	chr5	+	6143	9	FSM	ENSG00000085365.18	ENST00000621999.5	6143	9	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_4	37.4631068519417	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGGTACCTCTGCTAA	78356302	True	NA	11	True	AATAAA	-22	NA	78360616	78480739	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_78360729_78388836_78388915_78415519_78415619_78416540_78416650_78418774_78418904_78421800_78421961_78449932_78450035_78459244_78459363_78475503
transcript_160460.nic	chr5	+	2691	8	NIC	ENSG00000085365.18	novel	6143	9	NA	NA	-554	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_6	112.930355999273	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAGCAAGAAAATATAAATA	78359929	True	NA	NA	False	AATAAA	-23	NA	78360056	78476829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_78360729_78388836_78388915_78415519_78415619_78416540_78416650_78418774_78418904_78421800_78421961_78459244_78459363_78475503
transcript_160461.known	chr5	+	1276	8	FSM	ENSG00000085365.18	ENST00000614488.4	1276	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	118.665195282478	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAAGGATTGCACATTGG	78356296	True	NA	NA	False	NA	NA	NA	78360610	78476026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_78360729_78388836_78388915_78415519_78415619_78416540_78416650_78418774_78418904_78449932_78450035_78459244_78459363_78475503
transcript_160462.known	chr5	+	1358	8	FSM	ENSG00000085365.18	ENST00000618166.4	1358	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	115.761366083642	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAAGGATTGCACATTGG	78356296	True	NA	NA	False	NA	NA	NA	78360610	78476026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_78360729_78415519_78415619_78416540_78416650_78418774_78418904_78421800_78421961_78449932_78450035_78459244_78459363_78475503
transcript_160468.known	chr5	-	4977	5	FSM	ENSG00000145685.14	ENST00000380345.7	4977	5	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	10.0124921972504	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTATTCTTTCAAGTCTG	-78648757	False	1539	-23	True	ATTAAA	-18	NA	78648772	78485229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_78489154_78509783_78510399_78564812_78564872_78632263_78632369_78648498
transcript_160472.nic	chr5	-	4993	4	NIC	ENSG00000145685.14	novel	4977	5	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	75.8463358816144	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTATTCTTTCAAGTCTG	-78647354	True	NA	-23	True	ATTAAA	-18	NA	78648893	78485229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_78489154_78509783_78510399_78564812_78564872_78648498
transcript_160475.known	chr5	-	4852	8	FSM	ENSG00000113273.17	ENST00000264914.10	4852	8	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	10.5887888344037	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCAATCATTGCCCTAAG	-78984129	True	NA	NA	False	AATAAA	-33	NA	78985310	78777208	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_78780663_78781851_78781975_78839355_78839427_78885583_78885828_78955294_78955503_78964415_78964607_78969005_78969193_78984936
transcript_160478.known	chr5	-	2316	8	FSM	ENSG00000113273.17	ENST00000396151.7	2316	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	36.4691650576209	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGCTAACTGCACAGGGG	NA	False	NA	NA	False	NA	NA	NA	78986087	78815510	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_78816115_78839355_78839427_78885583_78885828_78955294_78955503_78964415_78964607_78969005_78969193_78984936_78985559_78985898
transcript_160480.known	chr5	+	2470	8	FSM	ENSG00000145692.15	ENST00000274353.10	2470	8	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_4	2.43276948084663	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCTTGTATTTTATTCT	79111748	True	NA	NA	False	ATTAAA	-20	NA	79111808	79132288	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_79111919_79115766_79115900_79119258_79119378_79120349_79120542_79121217_79121366_79126045_79126229_79127754_79127984_79130932
transcript_160481.known	chr5	+	9096	11	FSM	ENSG00000152409.9	ENST00000396137.5	9096	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_10	5.8	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACCTGATTTTGTTTGTT	79235322	True	NA	8	True	AATAAA	-20	NA	79236130	79327211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_79237683_79277909_79278084_79290120_79290272_79291129_79291300_79300152_79300319_79300675_79300864_79306374_79306462_79312402_79312499_79314256_79314852_79315999_79316311_79321605
transcript_160483.nic	chr5	+	2433	6	ISM	ENSG00000152409.9	ENST00000396137.5	9096	11	-33	26349	-33	-24335	5prime_fragment	FALSE	canonical	3	29	junction_1	1.67332005306815	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATTTAAATATTGCTTTT	79235289	True	NA	NA	False	AATAAA	-3	NA	79236097	79300862	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_79237683_79277909_79278084_79290120_79290272_79291129_79291300_79300152_79300319_79300675
transcript_160484.nic	chr5	+	2245	5	ISM	ENSG00000152409.9	ENST00000396137.5	9096	11	-33	26894	-33	-24880	5prime_fragment	FALSE	canonical	3	29	junction_1	0.82915619758885	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGGCGTGCATTTAACC	79235289	True	NA	16	True	NA	NA	NA	79236097	79300317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_79237683_79277909_79278084_79290120_79290272_79291129_79291300_79300152
transcript_160487.known	chr5	+	3129	16	FSM	ENSG00000164329.14	ENST00000296783.7	3129	16	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	51.0169470753483	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGCCTTTTTTTTCTGT	79609509	True	NA	11	True	AATAAA	-21	NA	79612572	79686648	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_79612770_79613010_79613076_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642831_79642911_79645122_79645193_79648616_79648694_79649061_79649191_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
transcript_160495.known	chr5	+	3223	16	FSM	ENSG00000164329.14	ENST00000423041.6	3223	16	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	52.7255367181997	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGCCTTTTTTTTCTGT	NA	False	NA	11	True	AATAAA	-21	NA	79612432	79686648	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_79612736_79613010_79613076_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642843_79642911_79645122_79645193_79648616_79648694_79649061_79649191_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
transcript_160496.known	chr5	+	5100	15	FSM	ENSG00000164329.14	ENST00000453514.6	5100	15	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_6	32.0417457294036	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATTCTCATGAAATGAATA	79609377	True	NA	20	True	AATAAA	-24	NA	79612440	79688246	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_79613076_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642831_79642911_79645122_79645193_79648616_79648694_79649061_79649191_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
transcript_160499.nic	chr5	+	3114	15	NIC	ENSG00000164329.14	novel	3223	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	102	junction_6	32.2573358212626	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTAATGTTTGTAAAAAAT	79609371	True	NA	NA	False	AATAAA	-17	NA	79612434	79686266	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_79613076_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642843_79642911_79645122_79645193_79648616_79648694_79649061_79649191_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
transcript_16050.nic	chr1	-	3124	13	NIC	ENSG00000132716.19	novel	4106	14	NA	NA	-11	-106	intron_retention	FALSE	canonical	3	99	junction_12	169.491641878491	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGTAATGGTGTGGAAG	-160250460	True	NA	-22	True	AATAAA	-17	NA	160262487	160216658	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160262116
transcript_160500.nic	chr5	+	3496	15	NIC	ENSG00000164329.14	novel	3223	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	102	junction_6	32.2573358212626	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGCCTTTTTTTTCTGT	79609371	True	NA	11	True	AATAAA	-21	NA	79612434	79686648	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_79613076_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642843_79642911_79645122_79645193_79648616_79648694_79649061_79649191_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
transcript_160504.known	chr5	-	7931	9	FSM	ENSG00000177034.17	ENST00000512528.3	7931	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	19.5703857907809	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCGATTTAATGTTATTT	-79989339	True	NA	0	True	AATAAA	-29	NA	79991262	79976715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_79983795_79985570_79985660_79986949_79987108_79988238_79988316_79988461_79988645_79989151_79989245_79990159_79990237_79990593_79990664_79991157
transcript_160506.known	chr5	-	4778	8	FSM	ENSG00000177034.17	ENST00000509852.6	4778	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	15.9232854778203	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAAAAAAACCCT	-79989336	True	NA	NA	False	NA	NA	NA	79991259	79979776	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_79983795_79986949_79987108_79988238_79988316_79988461_79988645_79989151_79989245_79990159_79990237_79990593_79990664_79991157
transcript_160509.nic	chr5	+	3096	23	NIC	ENSG00000113296.14	novel	853	5	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_2	20.8635868488222	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGTTGCTCAGACATTGC	79990716	True	NA	22	True	AATAAA	-24	NA	79991304	80083287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_79991413_79998331_79998376_80040076_80040281_80055784_80056033_80058205_80058315_80058707_80058791_80059439_80059492_80059702_80059906_80061694_80061833_80065408_80065478_80067972_80068126_80070305_80070411_80070642_80070751_80071020_80071181_80072277_80072397_80073274_80073328_80076854_80077049_80078048_80078228_80078920_80078970_80079061_80079259_80079904_80080078_80082405_80082546_80083079
transcript_160512.known	chr5	+	3222	22	FSM	ENSG00000113296.14	ENST00000350881.6	3222	22	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_8	13.0072367786852	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGTTGCTCAGACATTGC	80034790	True	NA	22	True	AATAAA	-24	NA	80035347	80083287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_80035626_80040076_80040281_80055784_80056033_80058205_80058315_80058707_80058791_80059439_80059492_80059702_80059906_80061694_80061833_80065408_80065478_80067972_80068126_80070305_80070411_80070642_80070751_80071020_80071181_80072277_80072397_80073274_80073328_80076854_80077049_80078048_80078228_80078920_80078970_80079061_80079259_80079904_80080078_80082405_80082546_80083079
transcript_160514.nnic	chr5	+	3331	21	NIC	ENSG00000113296.14	novel	3222	22	NA	NA	-247	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_7	20.3996936251504	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGTTGCTCAGACATTGC	80035078	False	NA	22	True	AATAAA	-24	NA	80035100	80083287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_80035626_80040076_80040281_80055784_80056033_80058205_80058315_80058707_80058791_80059439_80059492_80059702_80059906_80065408_80065478_80067972_80068126_80070305_80070411_80070642_80070751_80071020_80071181_80072277_80072397_80073274_80073328_80076854_80077049_80078048_80078228_80078920_80078970_80079061_80079259_80079904_80080078_80082405_80082546_80083079
transcript_160519.known	chr5	-	1441	13	FSM	ENSG00000164300.17	ENST00000509193.5	1441	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	26.9921542098605	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCCTTACCCACCCCCTT	-80242339	True	NA	NA	False	NA	NA	NA	80256019	80111650	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_80111703_80113571_80113626_80146089_80146235_80147244_80147285_80150881_80150949_80158835_80158963_80166382_80166479_80169334_80169547_80174953_80175048_80177314_80177398_80177885_80178065_80202885_80203054_80255895
transcript_16052.nic	chr1	-	2910	13	NIC	ENSG00000132716.19	novel	3867	14	NA	NA	-56	-106	intron_retention	FALSE	canonical	3	95	junction_12	170.206655438486	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGTAATGGTGTGGAAG	-160250578	False	NA	-22	True	AATAAA	-17	NA	160262605	160216658	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160262448
transcript_160522.known	chr5	-	6448	12	FSM	ENSG00000164300.17	ENST00000507668.7	6448	12	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	16.9910039396156	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGATGTTTTGAAATATGT	-80242368	True	NA	-12	True	AATAAA	-24	NA	80256048	80138726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_80143811_80146089_80146235_80147244_80147285_80150881_80150949_80158835_80158963_80166382_80166479_80169334_80169547_80174953_80175048_80177314_80177398_80177885_80178065_80202885_80203054_80255895
transcript_160530.nnic	chr5	-	1242	8	NNC	ENSG00000164300.17	novel	547	4	NA	NA	-21	-8387	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	22.5162073146597	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAGAATTGAAGTTGTTT	-80242389	True	NA	NA	False	AATAAA	-10	NA	80256069	80165380	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_80165617_80166382_80166479_80169334_80169547_80174953_80175048_80177314_80177398_80177885_80178065_80202885_80203054_80255895
transcript_160532.nic	chr5	-	2478	7	ISM	ENSG00000164300.17	ENST00000507668.7	6448	12	-21	26184	-21	-7917	5prime_fragment	FALSE	canonical	3	67	junction_2	9.10433352249844	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGAAAAAAAGTTATTTTAA	-80242389	True	NA	NA	False	NA	NA	NA	80256069	80164910	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_80166479_80169334_80169547_80174953_80175048_80177314_80177398_80177885_80178065_80202885_80203054_80255895
transcript_160537.known	chr5	+	6773	18	FSM	ENSG00000039319.17	ENST00000338008.9	6773	18	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	11.6696157090046	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGCTATTCAACAAACTT	80406322	True	NA	108	True	AGTAAA	-20	NA	80408012	80479350	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_80408154_80434108_80434218_80436755_80439008_80439935_80440033_80443122_80443285_80445262_80445406_80448025_80448405_80449590_80449714_80450430_80450587_80451484_80451710_80455691_80455775_80456460_80456566_80456944_80457093_80459413_80459495_80472760_80472924_80473753_80473860_80474662_80474831_80477218
transcript_160540.known	chr5	+	6680	19	FSM	ENSG00000039319.17	ENST00000510158.5	6680	19	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	25.381533094402	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTTTGTAGACATATAGT	80406333	True	NA	26	True	AATAAA	-44	NA	80408023	80479140	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_80408154_80411645_80411774_80434108_80434218_80436755_80439008_80439935_80440033_80443122_80443285_80445262_80445406_80448025_80448405_80449590_80449714_80450430_80450587_80451484_80451710_80455691_80455775_80456460_80456566_80456944_80457093_80459413_80459495_80472760_80472924_80473753_80473860_80474662_80474831_80477218
transcript_160542.nic	chr5	+	482	3	ISM	ENSG00000039319.17	ENST00000510995.1	2873	4	-85	3404	-15	-187	5prime_fragment	FALSE	canonical	3	62	junction_1	7	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAACAGGACTTGATCTTC	80406307	True	NA	NA	False	AATGAA	-42	NA	80407997	80436972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_80408154_80434108_80434218_80436755
transcript_160543.nic	chr5	+	825	3	ISM	ENSG00000039319.17	ENST00000510995.1	2873	4	-23	2999	-4	218	5prime_fragment	FALSE	canonical	3	62	junction_1	7	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCTTTAATCAGTTAGAAT	80406369	True	NA	24	True	GATAAA	-3	NA	80408059	80437377	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_80408154_80434108_80434218_80436755
transcript_160547.known	chr5	-	4400	3	FSM	ENSG00000249042.6	ENST00000508000.6	4400	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	25	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTATATGTCTACAAAGAAT	-80488040	False	NA	NA	False	NA	NA	NA	80488070	80479160	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_80483167_80485465_80485562_80487772
transcript_160551.known	chr5	-	3730	5	FSM	ENSG00000189127.8	ENST00000338682.8	3730	5	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_2	5.16599457994296	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTTACTGATTTTTAT	-80570109	False	171	0	True	AATAAA	-15	NA	80570280	80556754	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_80560043_80563734_80563816_80566688_80566775_80568959_80569108_80570153
transcript_160556.nnic	chr5	-	1663	4	NNC	ENSG00000189127.8	novel	3730	5	NA	NA	-178	-4734	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	0.942809041582063	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGTGAGCAAACAAAGTGG	-80570287	True	NA	NA	False	NA	NA	NA	80570458	80564702	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_80565827_80566688_80566775_80568959_80569108_80570153
transcript_160560.known	chr5	+	4443	24	FSM	ENSG00000113318.11	ENST00000265081.7	4443	24	0	0	0	0	multi-exon	FALSE	non_canonical	3	64	junction_1	9.26892892832073	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATGGTATGTCCCATTG	80652472	True	NA	14	True	AATAAA	-23	NA	80654651	80876815	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_80654965_80656410_80656532_80665142_80665364_80670096_80670310_80672243_80672361_80672740_80672859_80674982_80675129_80678926_80679094_80725452_80725566_80728850_80728966_80741463_80741549_80744505_80744616_80761545_80761679_80767932_80768121_80768834_80769004_80775693_80775759_80778719_80778837_80787564_80787673_80792732_80792845_80813583_80813742_80854129_80854317_80864812_80864943_80873115_80873288_80875750
transcript_160564.nic	chr5	+	3416	23	ISM	ENSG00000113318.11	ENST00000265081.7	4443	24	-39	3529	-39	-2583	5prime_fragment	FALSE	non_canonical	3	64	junction_1	9.35359125798683	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCAGAGTGATTATGCTGC	80652433	True	NA	18	True	AATAAA	-9	NA	80654612	80873286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_80654965_80656410_80656532_80665142_80665364_80670096_80670310_80672243_80672361_80672740_80672859_80674982_80675129_80678926_80679094_80725452_80725566_80728850_80728966_80741463_80741549_80744505_80744616_80761545_80761679_80767932_80768121_80768834_80769004_80775693_80775759_80778719_80778837_80787564_80787673_80792732_80792845_80813583_80813742_80854129_80854317_80864812_80864943_80873115
transcript_160567.nic	chr5	+	2684	19	ISM	ENSG00000113318.11	ENST00000670357.1	4486	25	-39	83935	-39	31148	5prime_fragment	FALSE	non_canonical	3	64	junction_1	8.81216891506593	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGTAATAAAAAATGGAAGG	80652433	True	NA	NA	False	AAGAAA	-7	NA	80654612	80792758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_80654965_80656410_80656532_80665142_80665364_80670096_80670310_80672243_80672361_80672740_80672859_80674982_80675129_80678926_80679094_80725452_80725566_80728850_80728966_80741463_80741549_80744505_80744616_80761545_80761679_80767932_80768121_80768834_80769004_80775693_80775759_80778719_80778837_80787564_80787673_80792732
transcript_160568.nic	chr5	+	2658	18	ISM	ENSG00000113318.11	ENST00000670357.1	4486	25	-39	89021	-39	26062	5prime_fragment	FALSE	non_canonical	3	64	junction_1	9.03893921571158	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGATATTTTTCATTTTC	80652433	True	NA	11	True	NA	NA	NA	80654612	80787672	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_80654965_80656410_80656532_80665142_80665364_80670096_80670310_80672243_80672361_80672740_80672859_80674982_80675129_80678926_80679094_80725452_80725566_80728850_80728966_80741463_80741549_80744505_80744616_80761545_80761679_80767932_80768121_80768834_80769004_80775693_80775759_80778719_80778837_80787564
transcript_160572.nic	chr5	+	2331	15	ISM	ENSG00000113318.11	ENST00000670357.1	4486	25	-39	107727	-39	7356	5prime_fragment	FALSE	non_canonical	3	64	junction_1	9.32437008869877	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTCTGCACAATATGTGA	80652433	True	NA	NA	False	ACTAAA	-4	NA	80654612	80768966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_80654965_80656410_80656532_80665142_80665364_80670096_80670310_80672243_80672361_80672740_80672859_80674982_80675129_80678926_80679094_80725452_80725566_80728850_80728966_80741463_80741549_80744505_80744616_80761545_80761679_80767932_80768121_80768834
transcript_160577.nic	chr5	+	415	2	ISM	ENSG00000113318.11	ENST00000667069.1	3964	22	-81	220100	-39	-40	5prime_fragment	FALSE	canonical	3	64	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAAGAAAGTCCAACAAAA	80652433	True	NA	NA	False	AAAAAG	-4	NA	80654612	80656473	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_80654965_80656410
transcript_160580.known	chr5	-	3919	6	FSM	ENSG00000228716.7	ENST00000439211.7	3919	6	0	0	0	0	multi-exon	FALSE	canonical	3	706	junction_1	66.6855306644552	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCCTCCTGTTGTTCTT	-80653584	True	NA	0	True	AATAAA	-22	NA	80654983	80626225	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_80629166_80633876_80633993_80637882_80638010_80649388_80649495_80654007_80654058_80654403
transcript_160583.known	chr5	-	1447	5	FSM	ENSG00000228716.7	ENST00000504396.1	1447	5	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_4	310.367826135378	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTTTTTTTAGACAGC	-80653159	False	NA	NA	False	NA	NA	NA	80654558	80628222	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_80629166_80633876_80633993_80637882_80638010_80649388_80649495_80654403
transcript_160585.known	chr5	-	1474	5	FSM	ENSG00000228716.7	ENST00000511032.5	1474	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	360.349396419642	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTCCTGCCTCAGGCTC	-80653153	False	NA	NA	False	NA	NA	NA	80654552	80628123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_80629166_80637882_80638010_80649388_80649495_80654007_80654058_80654403
transcript_160588.known	chr5	+	2842	10	FSM	ENSG00000113319.13	ENST00000638442.1	2842	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_9	13.1271088840735	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTTATGTTGTATTTTT	80960723	False	NA	42	True	ATTAAA	-32	NA	80960738	81088579	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_80961027_81042876_81042984_81068031_81068180_81070491_81070582_81073198_81073453_81080120_81080201_81080595_81080790_81085801_81085912_81086834_81086954_81087127
transcript_160593.known	chr5	-	535	4	FSM	ENSG00000251450.2	ENST00000505694.1	535	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	3.29983164553722	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTACTATTTAATAAGTTC	-80960896	False	NA	-4	True	AATAAA	-16	NA	80960907	80947696	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_80947995_80948328_80948405_80951446_80951481_80960780
transcript_160594.known	chr5	-	601	2	FSM	ENSG00000247572.9	ENST00000512287.1	601	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCAAGCCCTTTTGTTAA	-81299430	True	NA	NA	False	ATTAAA	-16	NA	81301523	81235758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_81236123_81301286
transcript_160595.known	chr5	-	2063	2	FSM	ENSG00000247572.9	ENST00000669977.1	2063	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACCTAAAAAAGAAAATTTT	-81299472	True	NA	-30	True	AGTAAA	-1	NA	81301565	81237576	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_81239361_81301286
transcript_160596.known	chr5	-	2027	3	FSM	ENSG00000247572.9	ENST00000656836.1	2027	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGTAAAAATAAGCATGTG	-81299427	True	NA	-74	True	NA	NA	NA	81301520	81237620	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_81239361_81240327_81240381_81301286
transcript_160597.known	chr5	+	1476	10	FSM	ENSG00000131730.16	ENST00000254035.9	1476	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	5.2704627669473	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGCTTTGTTTCTCTGA	81233115	True	NA	NA	False	AATAAA	-16	NA	81233321	81266398	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_81233378_81251112_81251285_81252694_81252894_81254395_81254492_81254992_81255215_81256914_81257001_81257732_81257857_81259119_81259255_81263490_81263617_81266138
transcript_160598.known	chr5	+	1479	10	FSM	ENSG00000131730.16	ENST00000437669.5	1479	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5.98145281497545	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATCTTTGCTTTGTTTCTC	81233113	True	NA	NA	False	AATAAA	-13	NA	81233319	81266395	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_81233382_81251112_81251285_81252694_81252894_81254395_81254492_81254992_81255215_81256914_81257001_81257732_81257857_81259119_81259255_81263490_81263617_81266138
transcript_16060.nic	chr1	-	3057	13	NIC	ENSG00000132716.19	novel	4106	14	NA	NA	15	-185	intron_retention	FALSE	canonical	3	99	junction_12	169.491641878491	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGTATCAAGGTAAAATTA	-160250472	True	NA	-13	True	ATTAAA	-17	NA	160262499	160216737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160262116
transcript_160603.known	chr5	+	1372	6	FSM	ENSG00000131732.12	ENST00000380199.9	1372	6	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	64.9812280585709	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTATAATTTTTCTGAATA	81298122	True	NA	21	True	AATAAA	-35	NA	81301623	81313154	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_81301671_81304740_81305142_81308560_81308712_81308945_81309039_81311210_81311280_81312543
transcript_160604.known	chr5	+	1580	6	FSM	ENSG00000131732.12	ENST00000407610.8	1580	6	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	46.6193093041928	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAAGGATTCCAAGTTAC	81298085	True	NA	NA	False	AATAAA	-30	NA	81301586	81313297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_81301699_81304740_81305142_81308560_81308712_81308945_81309039_81311210_81311280_81312543
transcript_160605.known	chr5	+	1248	6	FSM	ENSG00000131732.12	ENST00000438268.2	1248	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	83.5382547100429	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAGCTAGCACTATCATG	81298139	True	NA	NA	False	AAAACA	-28	NA	81301640	81312662	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_81302056_81304740_81305142_81308560_81308712_81308945_81309039_81311210_81311280_81312543
transcript_160606.known	chr5	+	768	5	FSM	ENSG00000131732.12	ENST00000507402.5	768	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	88.0720585656995	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATAACCAAGTAGTTGTA	81298088	True	NA	NA	False	ATTAAA	-41	NA	81301589	81312917	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_81301671_81308560_81308712_81308945_81309039_81311210_81311280_81312543
transcript_160607.known	chr5	+	818	5	FSM	ENSG00000131732.12	ENST00000506458.5	818	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	85.0573336050455	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTATGCATAAATGTAAAA	81298121	True	NA	NA	False	TATAAA	-6	NA	81301622	81312972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_81301699_81308560_81308712_81308945_81309039_81311210_81311280_81312543
transcript_160608.nic	chr5	+	293	2	ISM	ENSG00000131732.12	ENST00000380199.9	1372	6	-34	8202	0	-4206	5prime_fragment	FALSE	canonical	3	58	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTACTTAAATGAAGATGT	81298088	True	NA	44	True	CATAAA	-19	NA	81301589	81304952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_81301671_81304740
transcript_160612.known	chr5	-	612	5	FSM	ENSG00000172497.9	ENST00000513751.1	612	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTCTTTTCTTAGAGCAC	-81394160	True	NA	NA	False	AGTAAA	-43	NA	81394179	81359851	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_81360039_81363787_81363890_81371749_81371811_81385756_81385827_81393987
transcript_160614.known	chr5	-	8780	17	FSM	ENSG00000145687.17	ENST00000320672.9	8841	17	-156	217	0	-217	multi-exon	TRUE	canonical	3	116	junction_14	17.8648353966668	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTGTGTATATAATTGAA	-81751234	False	NA	NA	False	CATAAA	-24	NA	81751253	81413020	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_81420534_81428584_81428684_81437429_81437459_81440557_81440637_81442652_81442724_81446867_81446923_81448789_81448826_81461054_81461104_81466973_81467042_81473699_81473771_81474495_81474563_81489249_81489310_81513627_81513718_81615472_81615558_81636556_81636619_81650266_81650340_81750980
transcript_160616.known	chr5	-	4465	17	FSM	ENSG00000145687.17	ENST00000615665.4	4465	17	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_9	39.789288759665	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGATTCTTAACTACGT	-81751234	False	NA	NA	False	AATACA	-23	NA	81751253	81417359	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_81420534_81428584_81428684_81437429_81437459_81440557_81440637_81442652_81442724_81446867_81446923_81448789_81448826_81461054_81461104_81466973_81467066_81473699_81473771_81474495_81474563_81489249_81489310_81513627_81513718_81615472_81615558_81636556_81636619_81650266_81650340_81750980
transcript_160617.nic	chr5	-	1647	15	NIC	ENSG00000145687.17	novel	8841	17	NA	NA	47	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_14	36.5106218819138	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGCGTCTGATGCAAG	-81616333	True	NA	-34	True	AATAAA	-24	NA	81616538	81419935	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_81420534_81428584_81428684_81437429_81437459_81440557_81440637_81442652_81442724_81446867_81446923_81448789_81448826_81461054_81461104_81466973_81467042_81473699_81473771_81474495_81474563_81489249_81489310_81513627_81513718_81615472_81615558_81616348
transcript_16062.nic	chr1	-	2831	13	NIC	ENSG00000132716.19	novel	3867	14	NA	NA	-56	-185	intron_retention	FALSE	canonical	3	95	junction_12	170.206655438486	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGTATCAAGGTAAAATTA	-160250578	False	NA	-13	True	ATTAAA	-17	NA	160262605	160216737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160262448
transcript_160621.known	chr5	+	1795	9	FSM	ENSG00000152348.16	ENST00000458350.7	1795	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	32.8878301959859	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTGTTATAAACATGACC	81971578	False	NA	20	True	ATTAAA	-26	NA	81972050	82254792	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_81972307_81976192_81976328_81987558_81987679_82058494_82058603_82164398_82164538_82178489_82178588_82252561_82252660_82253313_82253430_82254067
transcript_160627.known	chr5	+	3029	8	FSM	ENSG00000152348.16	ENST00000282185.8	3029	8	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	12.4408806040441	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAATGGTGTTCTTGTCT	81972003	False	NA	4	True	AATAAA	-17	NA	81972022	82256133	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_81972307_81987558_81987679_82058494_82058603_82164398_82164538_82178489_82178588_82252561_82252660_82253313_82253430_82254067
transcript_160635.nnic	chr5	+	1227	7	NIC	ENSG00000152348.16	novel	3029	8	NA	NA	-31	-384	combination_of_known_splicesites	FALSE	canonical	1	8	junction_2	34.7067076450008	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCTGTTTATGGTGGTG	NA	False	NA	-8	True	AATACA	-5	NA	81971991	82254408	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_81972307_81987558_81987679_82164398_82164538_82178489_82178588_82252561_82252660_82253313_82253430_82254067
transcript_160645.known	chr5	-	595	4	FSM	ENSG00000186468.13	ENST00000503605.1	595	4	0	0	0	0	multi-exon	FALSE	canonical	3	769	junction_3	6064.2309945743	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGGCCCTATACAAAG	-82278052	False	NA	-113	True	NA	NA	NA	82278143	82276154	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_82276256_82276397_82276519_82277692_82277853_82277930
transcript_160646.known	chr5	-	3252	4	FSM	ENSG00000186468.13	ENST00000296674.13	3252	4	0	0	0	0	multi-exon	FALSE	canonical	3	10370	junction_3	1541.98407543298	4172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGAGAGGTTTTGTCTGC	-82082969	True	NA	-10	True	AATAAA	-17	NA	82278354	82273319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_82276256_82276397_82276519_82277692_82277853_82278319
transcript_160647.known	chr5	-	836	3	FSM	ENSG00000186468.13	ENST00000507980.1	836	3	0	0	0	0	multi-exon	FALSE	canonical	3	10370	junction_2	1706	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTCATCCTGTGGAATAA	-82082969	True	NA	-78	True	NA	NA	NA	82278354	82275877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_82276519_82277692_82277853_82278319
transcript_160648.known	chr5	-	3142	5	FSM	ENSG00000186468.13	ENST00000651545.1	3142	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	5592.05653136661	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCTGAATAAAGCCCTTC	-82082983	True	NA	-39	True	NA	NA	NA	82278368	82273348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_82275114_82275208_82276256_82276397_82276519_82277692_82277853_82278319
transcript_160649.known	chr5	-	576	3	FSM	ENSG00000186468.13	ENST00000504293.5	576	3	0	0	0	0	multi-exon	FALSE	canonical	3	13479	junction_1	151.5	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTATCTTACTGTCCC	-82277860	False	NA	-18	True	AATAAA	-19	NA	82277951	82276059	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_82276256_82276397_82276519_82277692
transcript_160650.known	chr5	-	443	5	FSM	ENSG00000186468.13	ENST00000512493.5	443	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5592.89750487169	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAATCTGATGTAAGAAAC	-82082966	True	NA	NA	False	AATGAA	-18	NA	82278351	82275243	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_82275296_82276177_82276256_82276397_82276519_82277692_82277853_82278319
transcript_160657.known	chr5	+	1243	8	FSM	ENSG00000152422.16	ENST00000542685.5	1243	8	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_7	53.1516889742586	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTTGTGGTAGTTTGTG	83074731	True	NA	21	True	AATAAA	-21	NA	83077556	83311069	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_83077616_83104909_83105059_83111027_83111204_83195769_83195937_83203551_83203708_83204814_83204922_83258529_83258678_83310788
transcript_160658.known	chr5	+	1602	8	FSM	ENSG00000152422.16	ENST00000396027.9	1602	8	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	20.6318556942354	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGTGTTTTTAATAAA	83074721	True	NA	13	True	AATAAA	-18	NA	83077546	83353760	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_83077616_83104909_83105059_83111027_83111204_83195769_83195937_83203551_83203708_83204814_83204922_83258529_83258678_83353130
transcript_160659.known	chr5	+	1696	8	FSM	ENSG00000152422.16	ENST00000282268.7	1696	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	42.0830083506008	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTTGTGTTTTTAATA	83074672	True	NA	11	True	AATAAA	-16	NA	83077497	83353758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_83077663_83104909_83105059_83111027_83111204_83195769_83195937_83203551_83203708_83204814_83204922_83258529_83258678_83353130
transcript_160660.known	chr5	+	1579	8	FSM	ENSG00000152422.16	ENST00000338635.10	1579	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	55.7746925274413	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTACATAAACATTGTGAAAA	83074701	True	NA	-36	True	AATATA	-11	NA	83077526	83353711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_83077616_83104909_83105059_83111027_83111204_83195769_83195937_83203551_83203708_83204814_83204922_83258529_83258678_83353124
transcript_160665.known	chr5	-	4528	4	FSM	ENSG00000174695.10	ENST00000502346.2	4528	4	0	0	0	0	multi-exon	FALSE	canonical	3	1958	junction_3	151.422147213235	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCTCCTACTTTTGTCTT	-83056173	True	NA	-9	True	AATAAA	-20	NA	83077394	83052845	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_83057155_83061876_83061912_83065007_83065118_83077320
transcript_160670.known	chr5	-	596	3	FSM	ENSG00000174695.10	ENST00000504622.5	596	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	1101	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATCTTTATAGAATGAGA	-83056232	True	NA	-88	True	NA	NA	NA	83077453	83056726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_83057155_83061876_83061912_83077320
transcript_160674.nic	chr5	+	4751	8	ISM	ENSG00000038427.16	ENST00000265077.8	12345	15	-308	45142	-182	-87	5prime_fragment	FALSE	canonical	3	46	junction_6	102.108985392859	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAGAAAATGAAGAAGAAG	83467671	True	NA	NA	False	AATAGA	-13	NA	83471435	83537160	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_83472024_83483512_83483589_83490097_83490473_83493545_83493721_83493803_83493932_83512102_83512397_83519348_83522310_83537006
transcript_160680.nic	chr5	+	2667	7	ISM	ENSG00000038427.16	ENST00000512590.6	5923	14	-363	60818	-217	7404	5prime_fragment	FALSE	canonical	3	46	junction_6	87.7793952031012	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGACACATAGAAGAGAAAGA	83471273	False	NA	NA	False	NA	NA	NA	83471400	83520344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_83472024_83483512_83483589_83490097_83490473_83493545_83493721_83493803_83493932_83512102_83512397_83519348
transcript_160681.nic	chr5	+	2711	7	ISM	ENSG00000038427.16	ENST00000512590.6	5923	14	-338	60749	-192	7473	5prime_fragment	FALSE	canonical	3	46	junction_6	87.7793952031012	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAAGAAGAGATCACTAAA	83471298	False	NA	NA	False	NA	NA	NA	83471425	83520413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_83472024_83483512_83483589_83490097_83490473_83493545_83493721_83493803_83493932_83512102_83512397_83519348
transcript_160684.known	chr5	+	3973	7	FSM	ENSG00000038427.16	ENST00000513960.5	3973	7	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_6	29.2175746198528	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGAAGAAAGTACAAA	83468629	True	NA	NA	False	NA	NA	NA	83471776	83539684	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_83472024_83483512_83483589_83490097_83490473_83493545_83493721_83493803_83493932_83512102_83512397_83537006
transcript_160690.known	chr5	+	1825	6	FSM	ENSG00000038427.16	ENST00000513984.5	1825	6	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_2	15.6409718368137	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGCCTTCTAATCATTA	83468643	False	NA	NA	False	AATAAA	-29	NA	83471790	83512940	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_83472024_83483512_83483589_83490097_83490473_83493545_83493721_83493803_83493932_83512102
transcript_160692.known	chr5	-	4849	5	FSM	ENSG00000145681.11	ENST00000274341.9	4849	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	7.22841614740048	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAAGTTCTTCTCTTTAGC	-83720291	True	NA	NA	False	ATTAAA	-21	NA	83720855	83637804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_83641786_83644362_83644666_83652452_83652825_83673423_83673550_83720788
transcript_160696.known	chr5	-	4814	11	FSM	ENSG00000164176.13	ENST00000296591.10	4814	11	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_9	54.5468605879385	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAATTGTCTGAATGTGA	-84383998	True	NA	33	True	ATTAAA	-17	NA	84384880	83940553	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_83943569_83963204_83963361_84060299_84060485_84064699_84064845_84066450_84066607_84106648_84106831_84137240_84137355_84180392_84180522_84229854_84229885_84254083_84254213_84384307
transcript_160701.known	chr5	-	4244	10	FSM	ENSG00000164176.13	ENST00000380138.3	4244	10	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_8	45.3431361950185	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGATTCTTTTGAAGCAGT	-84379545	True	NA	-13	True	AATAAA	-13	NA	84384386	83940599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_83943569_83963204_83963361_84060299_84060485_84064699_84064845_84066450_84066607_84106648_84106831_84137240_84137355_84180392_84180522_84254083_84254213_84384307
transcript_160705.known	chr5	+	347	3	FSM	ENSG00000127184.13	ENST00000515763.1	347	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	5743.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTAATGCCTCTTTTTTG	86572681	True	NA	24	True	AATAAA	-14	NA	86617972	86620766	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_86618131_86619352_86619443_86620667
transcript_160706.known	chr5	+	629	3	FSM	ENSG00000127184.13	ENST00000247655.4	629	3	0	0	0	0	multi-exon	FALSE	canonical	3	11108	junction_2	202.5	2166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAGGTTTATTTCTATGA	86572649	True	NA	11	True	AATAAA	-18	NA	86617940	86620962	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_86618131_86619352_86619497_86620667
transcript_160708.known	chr5	+	369	3	FSM	ENSG00000127184.13	ENST00000511472.5	369	3	0	0	0	0	multi-exon	TRUE	canonical	3	877	junction_1	5115.5	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTAATGCCTCTTTTTTG	86572636	True	NA	24	True	AATAAA	-14	NA	86617927	86620766	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_86618054_86619352_86619497_86620667
transcript_160710.known	chr5	+	4746	25	FSM	ENSG00000145715.15	ENST00000274376.11	4746	25	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	28.3709309368273	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGATTACTTCTGTCTA	87266934	True	NA	11	True	AATAAA	-19	NA	87267882	87391916	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_87268991_87331347_87331501_87332506_87332643_87333266_87333338_87337973_87338092_87341289_87341322_87346671_87346725_87349213_87349365_87353156_87353236_87362550_87362672_87363347_87363505_87369812_87369901_87372117_87372196_87374162_87374321_87374839_87374917_87376392_87376566_87376880_87377041_87378395_87378539_87379734_87379851_87380508_87380596_87383712_87383781_87385300_87385390_87386825_87386904_87389392_87389528_87390799
transcript_160714.known	chr5	-	1280	9	FSM	ENSG00000134480.16	ENST00000256897.9	1280	9	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_5	29.4403528341628	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGAATAGCACCTGTTTT	-87407496	True	NA	-11	True	AATAAA	-15	NA	87412930	87394273	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_87394485_87395043_87395105_87399393_87399506_87401701_87401773_87404843_87405008_87407975_87408187_87409289_87409364_87411223_87411347_87412677
transcript_160733.known	chr5	+	874	5	FSM	ENSG00000247828.9	ENST00000665926.1	874	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	49.2442890089805	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCATGGAAAGCAAACCCATA	88266654	True	NA	NA	False	ACTAAA	-2	NA	88269037	88283049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_88269120_88269467_88269688_88270525_88270586_88282041_88282107_88282602
transcript_160734.known	chr5	+	5261	4	FSM	ENSG00000247828.9	ENST00000669353.1	5261	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	47.6818157745231	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATAAATTTCTATTGTTT	88266533	True	NA	-19	True	NA	NA	NA	88268916	88287627	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_88269028_88270525_88270586_88282041_88282107_88282602
transcript_160737.known	chr5	+	3379	4	FSM	ENSG00000247828.9	ENST00000658478.1	3379	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	32.6190128606002	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTTTGAATAAATCAATGT	88266507	True	NA	NA	False	NA	NA	NA	88268890	88439332	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_88269028_88270525_88270586_88410072_88410195_88436272
transcript_160740.known	chr5	+	3439	3	FSM	ENSG00000247828.9	ENST00000661377.2	3521	3	82	0	20	0	multi-exon	FALSE	canonical	3	101	junction_1	10.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAAAAATTACAAAATTA	88266569	True	NA	NA	False	NA	NA	NA	88268952	88285345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_88269028_88270525_88270586_88282041
transcript_160741.known	chr5	+	585	3	FSM	ENSG00000247828.9	ENST00000504922.6	633	3	48	0	1	0	multi-exon	FALSE	canonical	2	40	junction_2	30.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATTTTGATGAACTATAC	88266532	True	NA	33	True	AATAAA	-37	NA	88268915	88436685	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_88269028_88270525_88270586_88436272
transcript_160742.known	chr5	+	3391	3	FSM	ENSG00000247828.9	ENST00000659005.2	3454	3	63	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	7	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCCCCCATCTGTACAAA	88269047	True	NA	NA	False	NA	NA	NA	88269077	88285330	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_88269120_88270525_88270586_88282041
transcript_160743.known	chr5	+	552	3	FSM	ENSG00000247828.9	ENST00000657972.2	558	3	0	6	0	-1	multi-exon	FALSE	canonical	2	40	junction_2	34	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATATTTGGTTTCTTGTG	88266640	True	NA	16	True	AATAAA	-43	NA	88269023	88436668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_88269120_88270525_88270586_88436272
transcript_160744.known	chr5	+	2562	2	FSM	ENSG00000247828.9	ENST00000656903.1	2562	2	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTTTACAAAAATATAAAAA	88266547	True	NA	NA	False	NA	NA	NA	88268930	88272990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_88269028_88270525
transcript_160745.known	chr5	+	1736	5	FSM	ENSG00000247828.9	ENST00000666808.1	1736	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	40.4320417490881	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAACTGAAACAAAAGAATA	88266626	True	NA	87	True	AAGAAA	-19	NA	88269009	88287092	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_88269120_88270525_88270586_88282041_88282107_88282714_88282867_88285743
transcript_160746.known	chr5	-	3446	10	FSM	ENSG00000081189.16	ENST00000510942.5	3446	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	2.21665970480667	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGAACCTCTCTATGTCC	-88883158	False	NA	NA	False	AATAAA	-31	NA	88883184	88720828	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_88722830_88728492_88728629_88729217_88729348_88731728_88731902_88749069_88749118_88751856_88752044_88761184_88761329_88804597_88804802_88823734_88823928_88882954
transcript_160748.known	chr5	-	1026	6	FSM	ENSG00000153140.9	ENST00000522083.5	1026	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	336.119621563514	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTAAATTTGTTTTTAT	-90405793	True	NA	1	True	AATAAA	-27	NA	90409757	90393709	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_90394108_90396492_90396565_90399357_90399550_90405684_90405800_90407698_90407835_90409644
transcript_160749.known	chr5	-	2406	5	FSM	ENSG00000153140.9	ENST00000283122.8	2406	5	0	0	0	0	multi-exon	FALSE	canonical	3	569	junction_1	60.6892700565759	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGAGTCTTCTGTGA	-90405792	True	NA	NA	False	AATAAA	-19	NA	90409756	90392256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_90394108_90399357_90399550_90405684_90405800_90407698_90407835_90409644
transcript_160753.known	chr5	-	664	3	FSM	ENSG00000153140.9	ENST00000522842.1	664	3	0	0	0	0	multi-exon	FALSE	canonical	3	702	junction_2	10.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATAAAACTTGAAGGGTG	-90405802	True	NA	NA	False	NA	NA	NA	90409766	90405393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_90405800_90407698_90407835_90409644
transcript_160758.known	chr5	+	3251	8	FSM	ENSG00000113356.13	ENST00000504930.5	3251	8	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_1	125.775147605169	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTCTGGTTAATGATTA	90460410	True	NA	NA	False	AATAAA	-18	NA	90474888	90514553	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_90475021_90485534_90485685_90487999_90488130_90495676_90495734_90497655_90497707_90501905_90501989_90506527_90506675_90512052
transcript_160763.known	chr5	+	3290	8	FSM	ENSG00000113356.13	ENST00000651687.1	3290	8	0	0	0	0	multi-exon	FALSE	canonical	3	405	junction_1	73.0375916629126	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGGTTAATGATTATTCA	90460385	True	NA	NA	False	AATAAA	-22	NA	90474863	90514557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_90475021_90485524_90485685_90487999_90488130_90495676_90495734_90497655_90497707_90501905_90501989_90506527_90506675_90512052
transcript_160769.nic	chr5	+	684	7	ISM	ENSG00000113356.13	ENST00000504930.5	3251	8	-37	7982	-12	-5558	5prime_fragment	FALSE	canonical	3	236	junction_1	130.651891171413	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAGAGAAAGAAGGAAGCA	90460373	True	NA	13	True	AAAAAG	-31	NA	90474851	90506571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_90475021_90485534_90485685_90487999_90488130_90495676_90495734_90497655_90497707_90501905_90501989_90506527
transcript_160770.nic	chr5	+	694	7	ISM	ENSG00000113356.13	ENST00000651687.1	3290	8	-12	7986	-12	-5558	5prime_fragment	FALSE	canonical	3	405	junction_1	74.2757624591555	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAGAGAAAGAAGGAAGCA	90460373	True	NA	13	True	AAAAAG	-31	NA	90474851	90506571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_90475021_90485524_90485685_90487999_90488130_90495676_90495734_90497655_90497707_90501905_90501989_90506527
transcript_160778.nic	chr5	+	633	4	NIC	ENSG00000113356.13	novel	682	4	NA	NA	-12	-82	combination_of_known_junctions	FALSE	canonical	3	123	junction_3	219.624426894844	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATACATTTATATGTGCC	90460373	True	NA	10	True	AATAAA	-16	NA	90474851	90490776	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_90475021_90485534_90485685_90487999_90488130_90490592
transcript_160779.known	chr5	+	682	4	FSM	ENSG00000113356.13	ENST00000514483.5	682	4	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_3	209.382159910745	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAGTGAAAAAGAATTGGC	90460416	True	NA	92	True	CATAAA	-20	NA	90474894	90490858	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_90475021_90485524_90485685_90487999_90488130_90490592
transcript_160781.known	chr5	-	4277	2	FSM	ENSG00000176055.10	ENST00000316610.7	4277	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAATCTATAATTGATAT	-90474336	True	NA	-33	True	AATAAA	-15	NA	90474771	90458208	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_90461553_90473838
transcript_160790.known	chr5	+	2906	9	FSM	ENSG00000164199.18	ENST00000640109.1	2906	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_7	4.16645832812474	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGATTGCTTGATACT	90551788	True	NA	NA	False	TATAAA	-39	NA	90558799	90630510	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_90558918_90614834_90615020_90617803_90617954_90619085_90619182_90622596_90622702_90625129_90625244_90627210_90627777_90628561_90628833_90629209
transcript_160791.nnic	chr5	+	1525	8	NNC	ENSG00000164199.18	novel	893	6	NA	NA	-71	0	at_least_one_novel_splicesite	TRUE	canonical	3	29	junction_1	40.348482003664	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGTATCATCCAGCTTC	90928474	True	NA	13	True	AATAAA	-13	NA	90929168	91164215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_90929314_90965414_90965532_90985343_90985523_91072446_91072605_91102218_91102341_91150029_91150222_91153220_91153399_91163781
transcript_160792.nic	chr5	+	1608	8	NIC	ENSG00000164199.18	novel	893	6	NA	NA	-69	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	42.0160319256294	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGTATCATCCAGCTTC	90928476	True	NA	13	True	AATAAA	-13	NA	90929170	91164215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_90929399_90965414_90965532_90985343_90985523_91072446_91072605_91102218_91102341_91150029_91150222_91153220_91153399_91163781
transcript_160796.known	chr5	+	2221	6	FSM	ENSG00000164199.18	ENST00000638316.1	2221	6	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	2.85657137141714	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGCATAAATAAAAGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	90558685	90626582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_90558918_90614834_90615020_90617803_90617954_90619085_90619182_90622596_90622702_90625129
transcript_160799.known	chr5	+	893	6	FSM	ENSG00000164199.18	ENST00000639821.1	893	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	65.4235431629929	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCAGCTTTTGTGCTAAA	90928545	True	NA	NA	False	NA	NA	NA	90929239	91163939	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_90929399_90965414_90965532_90985343_90985523_91072446_91072605_91102218_91102341_91163781
transcript_160800.known	chr5	-	4262	3	FSM	ENSG00000176018.13	ENST00000315948.11	4262	3	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_1	0.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAGCCAGTGAATTTAAT	-90526467	True	NA	0	True	AATAAA	-23	NA	90529584	90515625	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_90519485_90525034_90525301_90529447
transcript_160801.known	chr5	-	1538	3	FSM	ENSG00000176018.13	ENST00000509384.5	1538	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	113.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGAAAGTGATTTATAATT	-90526467	True	NA	NA	False	AATACA	-41	NA	90529584	90518290	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_90519426_90525034_90525301_90529447
transcript_160804.nic	chr5	-	335	2	ISM	ENSG00000176018.13	ENST00000453259.2	553	4	-46	5716	-46	-5716	5prime_fragment	FALSE	canonical	3	264	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAAGTCCGAAGAAGTAC	-90526513	True	NA	NA	False	NA	NA	NA	90529630	90525148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_90525301_90529447
transcript_160805.known	chr5	-	4239	8	FSM	ENSG00000113369.9	ENST00000265138.4	4239	8	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_3	3.614031611621	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGGTAAGAATTGTATC	-91383090	True	NA	94	True	ATTAAA	-29	NA	91383317	91368630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_91371457_91373683_91373839_91374113_91374277_91374921_91375179_91375510_91375614_91376620_91376769_91378693_91378776_91382812
transcript_160808.known	chr5	-	4684	11	FSM	ENSG00000113391.19	ENST00000395965.8	4684	11	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_9	13.2245982925758	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGTGAGTTTAAGTTGC	-94110952	True	NA	NA	False	AATAAA	-18	NA	94111663	93617724	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_93621130_93776158_93776244_93784382_93784500_93824147_93824268_93881469_93881689_93958776_93958969_93964457_93964524_94050730_94050832_94053125_94053228_94074645_94074770_94111510
transcript_160811.known	chr5	-	1369	10	FSM	ENSG00000113391.19	ENST00000509163.5	1369	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_9	10.7496769977314	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTGTCGAGCGGACTC	-94110965	True	NA	NA	False	NA	NA	NA	94111676	93620928	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_93621130_93776158_93776244_93784382_93784500_93824147_93824268_93881469_93881689_93958776_93958969_93964457_93964524_94050730_94050832_94053125_94053228_94111510
transcript_160817.known	chr5	-	2262	5	FSM	ENSG00000185261.15	ENST00000329378.7	2262	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	4.76969600708473	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATGAATTTTCAAATTGT	-94618285	True	NA	11	True	AATAAA	-26	NA	94618597	94519205	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_94520918_94523929_94524099_94536995_94537128_94582432_94582584_94618499
transcript_160818.known	chr5	+	5583	21	FSM	ENSG00000133302.13	ENST00000265140.10	5583	21	0	0	0	0	multi-exon	TRUE	canonical	3	91	junction_7	17.3547543918086	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCAGCTTTTCCCCATGC	94616242	True	NA	NA	False	AATAAA	-29	NA	94618668	94697621	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_94618766_94628810_94628925_94629091_94629168_94630502_94630744_94643272_94643436_94649453_94649598_94651701_94651846_94653271_94653422_94654629_94654753_94662297_94662352_94663749_94663909_94665860_94666025_94670150_94670280_94670842_94671009_94678807_94678956_94686572_94686719_94688505_94688670_94689472_94689607_94691563_94691657_94692073_94692257_94694830
transcript_160822.nic	chr5	+	1090	8	ISM	ENSG00000133302.13	ENST00000265140.10	5583	21	-35	44274	-35	-1404	5prime_fragment	FALSE	canonical	3	91	junction_7	18.405855323893	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTGCAAGAAAGGCGTT	94616207	True	NA	NA	False	AAGAAA	-11	NA	94618633	94653347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_94618766_94628810_94628925_94629091_94629168_94630502_94630744_94643272_94643436_94649453_94649598_94651701_94651846_94653271
transcript_160823.nic	chr5	+	939	7	ISM	ENSG00000133302.13	ENST00000265140.10	5583	21	-35	45851	-35	-2981	5prime_fragment	FALSE	canonical	3	122	junction_2	11.5385826204473	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGTGGTTCCAGTAAAGA	94616207	True	NA	-66	True	AAAAAG	-6	NA	94618633	94651770	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_94618766_94628810_94628925_94629091_94629168_94630502_94630744_94643272_94643436_94649453_94649598_94651701
transcript_160824.nic	chr5	+	1014	7	ISM	ENSG00000133302.13	ENST00000265140.10	5583	21	-35	45776	-35	-2906	5prime_fragment	FALSE	canonical	3	122	junction_2	11.5385826204473	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACAACTTTCCAAATTAAA	94616207	True	NA	9	True	NA	NA	NA	94618633	94651845	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_94618766_94628810_94628925_94629091_94629168_94630502_94630744_94643272_94643436_94649453_94649598_94651701
transcript_160825.nic	chr5	+	870	6	ISM	ENSG00000133302.13	ENST00000265140.10	5583	21	-35	48024	-35	-5154	5prime_fragment	FALSE	canonical	3	122	junction_2	11.47170431976	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAACTTTATAGGCTGAAA	94616207	True	NA	3	True	AATGAA	-35	NA	94618633	94649597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_94618766_94628810_94628925_94629091_94629168_94630502_94630744_94643272_94643436_94649453
transcript_160828.nic	chr5	+	669	5	ISM	ENSG00000133302.13	ENST00000265140.10	5583	21	-35	54243	-35	-11373	5prime_fragment	FALSE	canonical	3	122	junction_2	12.6293309403151	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAACTTTAAGGCTCCATT	94616207	True	NA	NA	False	ATTAAA	-16	NA	94618633	94643378	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_94618766_94628810_94628925_94629091_94629168_94630502_94630744_94643272
transcript_160830.known	chr5	-	5677	43	FSM	ENSG00000198677.12	ENST00000358746.7	5677	43	0	0	0	0	multi-exon	TRUE	canonical	3	143	junction_30	27.359121732068	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTTCTTTATAGTGT	-95549375	True	NA	-21	True	AATAAA	-15	NA	95554977	95463893	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_95464682_95467865_95467990_95469779_95469911_95478289_95478443_95482472_95482632_95484723_95484846_95490907_95491037_95494681_95494794_95494963_95495018_95497415_95497489_95498369_95498592_95502879_95503004_95503813_95503939_95506933_95507012_95509593_95509688_95512476_95512619_95513570_95513646_95514854_95514924_95516352_95516410_95516524_95516587_95516671_95516751_95516915_95517061_95517145_95517323_95520715_95520819_95522053_95522308_95523201_95523327_95523654_95523835_95524464_95524592_95525397_95525502_95525586_95525674_95528012_95528153_95529000_95529103_95530088_95530230_95536816_95536926_95537042_95537142_95540689_95540831_95541304_95541381_95541814_95541907_95543183_95543328_95547060_95547152_95548559_95548716_95550580_95550651_95554935
transcript_160848.nic	chr5	-	2551	21	ISM	ENSG00000198677.12	ENST00000358746.7	5677	43	-41	53302	-41	-4064	5prime_fragment	FALSE	canonical	3	143	junction_8	18.499932432309	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGGAAAACAAGTATTAAA	-95549416	True	NA	NA	False	NA	NA	NA	95555018	95517195	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_95517323_95520715_95520819_95522053_95522308_95523201_95523327_95523654_95523835_95524464_95524592_95525397_95525502_95525586_95525674_95528012_95528153_95529000_95529103_95530088_95530230_95536816_95536926_95537042_95537142_95540689_95540831_95541304_95541381_95541814_95541907_95543183_95543328_95547060_95547152_95548559_95548716_95550580_95550651_95554935
transcript_16085.known	chr1	-	1237	9	FSM	ENSG00000162735.19	ENST00000532508.5	1237	9	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	314.516990797	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGAAGGAAGGCATCCCT	-160276285	True	NA	-88	True	NA	NA	NA	160285096	160279295	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_160279635_160279800_160279846_160280069_160280247_160281185_160281296_160282038_160282201_160282416_160282503_160282943_160283110_160283529_160283640_160285054
transcript_160850.nic	chr5	-	2287	19	ISM	ENSG00000198677.12	ENST00000358746.7	5677	43	-41	58194	-41	0	5prime_fragment	FALSE	canonical	3	143	junction_6	18.9459921166444	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAAGAAGATTATGT	-95549416	True	NA	NA	False	AATATA	-33	NA	95555018	95522087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_95522308_95523201_95523327_95523654_95523835_95524464_95524592_95525397_95525502_95525586_95525674_95528012_95528153_95529000_95529103_95530088_95530230_95536816_95536926_95537042_95537142_95540689_95540831_95541304_95541381_95541814_95541907_95543183_95543328_95547060_95547152_95548559_95548716_95550580_95550651_95554935
transcript_160853.nic	chr5	-	2570	10	ISM	ENSG00000198677.12	ENST00000358746.7	5677	43	-41	71414	-41	1216	5prime_fragment	FALSE	canonical	3	146	junction_2	21.30785515621	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTTACCTTCAGCTCT	-95549416	True	NA	NA	False	NA	NA	NA	95555018	95535307	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_95536926_95537042_95537142_95540689_95540831_95541304_95541381_95541814_95541907_95543183_95543328_95547060_95547152_95548559_95548716_95550580_95550651_95554935
transcript_160854.nic	chr5	-	370	4	ISM	ENSG00000198677.12	ENST00000514952.5	2102	18	-41	25003	-41	-117	5prime_fragment	FALSE	canonical	3	159	junction_1	2.86744175568088	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATACAAAGAAGCTTTGAA	-95549416	True	NA	NA	False	AAAAAG	-26	NA	95555018	95547090	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_95547152_95548559_95548716_95550580_95550651_95554935
transcript_160855.known	chr5	+	3365	8	FSM	ENSG00000164291.17	ENST00000380009.9	3365	8	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_6	6.5621051873462	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTAGAATGGCCTTCTCC	95552358	True	NA	52	True	NA	NA	NA	95555100	95605102	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_95555405_95565997_95566128_95567889_95568050_95582915_95583199_95586561_95586734_95591400_95591626_95600846_95601072_95603236
transcript_160858.known	chr5	+	2582	6	FSM	ENSG00000175449.14	ENST00000380005.9	2582	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	12.3028451993838	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACAGAAATCTTCTCATC	95646279	True	NA	NA	False	AATAAA	-24	NA	95646776	95658082	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_95646818_95652136_95652332_95653116_95653215_95654060_95654237_95654332_95654368_95656045
transcript_160861.known	chr5	+	615	5	FSM	ENSG00000175449.14	ENST00000511684.5	615	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	6.41774882649672	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCACACAGTGACAGTAGAC	95646256	True	NA	NA	False	AATAAA	-9	NA	95646753	95656190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_95646818_95652136_95652332_95654060_95654237_95654332_95654368_95656045
transcript_160864.known	chr5	+	5370	12	FSM	ENSG00000164292.13	ENST00000379982.8	5370	12	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_7	9.68939097779944	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAACGAAGTGTCCTGTA	95730902	True	NA	NA	False	AATAAA	-16	NA	95731335	95796361	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_95731685_95731858_95732085_95736888_95737076_95748332_95748488_95752238_95752351_95755395_95755762_95763507_95763621_95768045_95768167_95780251_95780426_95783796_95783964_95788761_95788859_95793058
transcript_160868.nic	chr5	+	1266	5	ISM	ENSG00000164292.13	ENST00000379982.8	5370	12	-300	44074	-110	0	5prime_fragment	FALSE	canonical	3	46	junction_1	7.32717544487642	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAGAAAAGAAAAATGAGC	NA	False	NA	NA	False	NA	NA	NA	95731035	95752287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_95731685_95731858_95732085_95736888_95737076_95748332_95748488_95752238
transcript_160869.known	chr5	-	932	3	FSM	ENSG00000173221.14	ENST00000237858.11	932	3	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_2	3	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACTGAGTACAAATGGCT	-95819924	True	NA	-12	True	AATAAA	-18	NA	95822726	95813848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_95814390_95816506_95816627_95822455
transcript_160870.known	chr5	-	1366	3	FSM	ENSG00000173221.14	ENST00000379979.8	1366	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	125	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGTCCAATTCATTTG	-95819912	True	NA	-1	True	AATAAA	-24	NA	95822714	95813970	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_95814958_95816506_95816627_95822455
transcript_160873.known	chr5	-	5826	12	FSM	ENSG00000118985.16	ENST00000237853.9	5826	12	0	0	0	0	multi-exon	TRUE	canonical	3	75	junction_10	15.592963023998	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTACTTGTTTTTCCT	-95958567	True	NA	-7	True	AATAAA	-17	NA	95961851	95885097	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_95888988_95889085_95889131_95891102_95891275_95895627_95895692_95898239_95898811_95900692_95900781_95900955_95901081_95906522_95906783_95913770_95913935_95919423_95919546_95943001_95943050_95961574
transcript_160879.known	chr5	-	582	5	FSM	ENSG00000118985.16	ENST00000513343.1	582	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	46.8001068374849	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCGAATATCTCACCTGA	-95958564	True	NA	NA	False	AATAAA	-3	NA	95961848	95898763	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_95898811_95900692_95900781_95900955_95901081_95943001_95943050_95961574
transcript_16088.known	chr1	-	3653	8	FSM	ENSG00000162735.19	ENST00000368072.10	3653	8	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_7	38.1928511314751	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCCTGTGACTCTGGA	-160276322	True	NA	-7	True	AATACA	-20	NA	160285133	160276806	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_160279635_160279800_160279846_160280069_160280247_160282038_160282201_160282416_160282503_160282943_160283110_160283529_160283640_160285054
transcript_160881.known	chr5	-	5136	14	FSM	ENSG00000175426.11	ENST00000311106.8	5136	14	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	7.20699857099798	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGATCTCCCTCTTTTATT	-96433021	True	NA	NA	False	AAAAAG	-20	NA	96433248	96390332	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_96393379_96394863_96395026_96397335_96397470_96398878_96399037_96399952_96400187_96408222_96408324_96410773_96410987_96412317_96412491_96416032_96416122_96421879_96421957_96423312_96423460_96425819_96425931_96429212_96429318_96432862
transcript_160888.known	chr5	+	4490	32	FSM	ENSG00000153113.24	ENST00000675179.1	4490	32	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	50.7432992044459	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTGTGTATTTTTTT	96660747	True	NA	NA	False	ATTAAA	-22	NA	96662375	96774683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_96662498_96675538_96675602_96695835_96695908_96722638_96722699_96726793_96726860_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765220_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
transcript_160894.known	chr5	+	4330	31	FSM	ENSG00000153113.24	ENST00000674984.1	4330	31	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_3	30.93534476219	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATCAAGGCATAAAATACA	96660794	False	NA	NA	False	NA	NA	NA	96662422	96774636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_96662498_96675538_96675602_96695835_96695908_96722638_96722699_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765220_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
transcript_160902.known	chr5	+	4263	31	FSM	ENSG00000153113.24	ENST00000675663.1	4263	31	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	46.2159303944238	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTAGAGGCAAAGAACAAT	96662770	True	NA	NA	False	NA	NA	NA	96663003	96774481	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_96663167_96675538_96675602_96695835_96695908_96722638_96722699_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765220_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
transcript_160905.known	chr5	+	4506	30	FSM	ENSG00000153113.24	ENST00000395812.6	4506	30	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_5	43.1644809281092	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTGTGTATTTTTTT	96660608	True	NA	NA	False	ATTAAA	-22	NA	96662236	96774683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_96662498_96675538_96675602_96695835_96695908_96722638_96722699_96727488_96727531_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765220_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
transcript_160912.known	chr5	+	3273	30	FSM	ENSG00000153113.24	ENST00000511049.5	3273	30	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	65.2087656326884	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAAAAGAAACTTCTGCT	96701367	True	NA	NA	False	NA	NA	NA	96702799	96773570	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_96702916_96722638_96722699_96726753_96726860_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765223_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
transcript_160913.known	chr5	+	4356	30	FSM	ENSG00000153113.24	ENST00000395813.5	4356	30	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	53.8359025142551	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCTTGGTTGTGTATTT	96701356	True	NA	NA	False	ATTAAA	-18	NA	96702788	96774679	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_96702916_96722638_96722699_96726793_96726860_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765220_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
transcript_160917.known	chr5	+	4282	29	FSM	ENSG00000153113.24	ENST00000309190.9	4282	29	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	33.6349702614674	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTGTGTATTTTTTT	96701368	True	NA	NA	False	ATTAAA	-22	NA	96702800	96774683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_96702916_96722638_96722699_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765220_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
transcript_160932.nic	chr5	+	1361	15	ISM	ENSG00000153113.24	ENST00000674984.1	4330	31	-226	31879	-6	948	5prime_fragment	FALSE	canonical	3	138	junction_3	27.0620036363963	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGACCTTAGAGTTGATT	96660568	True	NA	7	True	NA	NA	NA	96662196	96742757	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_96662498_96675538_96675602_96695835_96695908_96722638_96722699_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654
transcript_160936.known	chr5	+	1399	15	FSM	ENSG00000153113.24	ENST00000511097.6	1399	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	55.6525757146376	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATTTTTAGCCACAGTG	96660574	True	NA	NA	False	ATTAAA	-11	NA	96662202	96746425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_96662498_96675538_96675602_96695835_96695908_96722638_96722699_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96741265_96741359_96741493_96741581_96742654_96742757_96746341
transcript_160945.known	chr5	+	571	8	FSM	ENSG00000153113.24	ENST00000508117.6	571	8	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	79.9226667038909	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAACCCCAGCTGTGCCA	96701370	True	NA	NA	False	AAAAAG	-10	NA	96702802	96736187	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_96702916_96722638_96722699_96726793_96726860_96727488_96727531_96729152_96729210_96729589_96729726_96730779_96730861_96736171
transcript_160947.known	chr5	-	5495	20	FSM	ENSG00000164307.13	ENST00000296754.7	5495	20	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	10.871702066244	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAATTGTCATCATTCTT	-96808058	False	NA	NA	False	AATAAA	-20	NA	96808100	96760809	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_96763229_96776403_96776552_96780422_96780505_96781057_96781199_96781692_96781855_96783050_96783236_96783923_96784081_96785787_96785972_96786469_96786550_96788530_96788686_96790295_96790368_96790511_96790644_96792060_96792193_96793399_96793514_96793802_96793958_96795041_96795163_96797174_96797310_96800861_96801001_96803402_96803944_96807859
transcript_160951.known	chr5	-	3909	10	FSM	ENSG00000058729.11	ENST00000283109.8	3909	10	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_7	19.5776390460465	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGGTTTATATTTGTGCTA	-97178570	True	NA	0	True	AATAAA	-17	NA	97183247	97160866	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_97163226_97165050_97165148_97167466_97167992_97168759_97168853_97171205_97171398_97173174_97173264_97177115_97177292_97177731_97177849_97179054_97179194_97183125
transcript_160953.known	chr5	-	2149	8	FSM	ENSG00000058729.11	ENST00000508447.1	2149	8	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_5	19.7608146572546	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGCAGTGAATTTTCTC	-97178545	True	NA	NA	False	AATAAA	-19	NA	97183222	97166745	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_97167992_97168759_97168853_97171205_97171398_97173174_97173264_97177115_97177292_97177731_97177849_97179054_97179194_97183125
transcript_160959.known	chr5	+	4580	5	FSM	ENSG00000174136.13	ENST00000308234.11	4580	5	0	0	0	0	multi-exon	FALSE	canonical	1	52	junction_2	38.7387080321479	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTTCTGTGATTATAG	98768418	True	NA	13	True	AATAAA	-22	NA	98769294	98796494	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_98769626_98770597_98770674_98773952_98774207_98779579_98780089_98793084
transcript_16096.known	chr1	-	3504	7	FSM	ENSG00000162735.19	ENST00000472750.5	3504	7	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_6	233.760383013604	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATGGGTGGCTTCATGA	-160276343	True	NA	-5	True	ATTAAA	-21	NA	160285154	160276866	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_160279635_160279800_160279846_160280069_160280247_160282038_160282201_160282416_160282503_160282943_160283110_160285054
transcript_160970.known	chr5	-	397	2	FSM	ENSG00000246763.7	ENST00000505677.1	397	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCGATTTGTGCAATCC	-98773405	True	NA	NA	False	NA	NA	NA	98773469	98770949	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_98771185_98773307
transcript_160971.known	chr5	+	4463	3	FSM	ENSG00000174136.13	ENST00000513185.3	4463	3	0	0	0	0	multi-exon	FALSE	canonical	1	57	junction_2	46	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTTCTGTGATTATAG	98771805	True	NA	13	True	AATAAA	-22	NA	98773662	98796494	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_98774207_98779579_98780089_98793084
transcript_160972.known	chr5	-	8145	36	FSM	ENSG00000153922.11	ENST00000614616.5	8145	36	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_21	33.6047372753744	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATAGCCTGTTTGCTTAT	-98922770	True	NA	NA	False	AATAAA	-16	NA	98929007	98853984	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_98856726_98858179_98858391_98858963_98859016_98859971_98860069_98863407_98863587_98868494_98868636_98869753_98869883_98870686_98870804_98872050_98872202_98872416_98872556_98873592_98873724_98875071_98875114_98876397_98876559_98879551_98879729_98881075_98881172_98881278_98881376_98881974_98882124_98883087_98883238_98885577_98885650_98888087_98888241_98889075_98889239_98892524_98892714_98893415_98893607_98894596_98894687_98896225_98896443_98897192_98897321_98898255_98898435_98898663_98898765_98899479_98899706_98900810_98901083_98901185_98901336_98902899_98902965_98903791_98903909_98904896_98905099_98926333_98926535_98928538
transcript_160976.nic	chr5	-	3838	23	ISM	ENSG00000153922.11	ENST00000614616.5	8145	36	-36	25619	-36	1643	5prime_fragment	FALSE	canonical	3	160	junction_8	19.4545985555775	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAACTTGAAGAAATTTATA	-98922806	True	NA	NA	False	AAGAAA	-8	NA	98929043	98879603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_98879729_98881075_98881172_98881278_98881376_98881974_98882124_98883087_98883238_98885577_98885650_98888087_98888241_98889075_98889239_98892524_98892714_98893415_98893607_98894596_98894687_98896225_98896443_98897192_98897321_98898255_98898435_98898663_98898765_98899479_98899706_98900810_98901083_98901185_98901336_98902899_98902965_98903791_98903909_98904896_98905099_98926333_98926535_98928538
transcript_160982.nic	chr5	-	1282	7	ISM	ENSG00000153922.11	ENST00000614616.5	8145	36	-36	47056	-36	-17907	5prime_fragment	FALSE	canonical	3	161	junction_6	10.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACAGATTGATTCATCTG	-98922806	True	NA	NA	False	NA	NA	NA	98929043	98901040	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_98901083_98901185_98901336_98902899_98902965_98903791_98903909_98904896_98905099_98926333_98926535_98928538
transcript_160983.nic	chr5	-	1240	6	ISM	ENSG00000153922.11	ENST00000614616.5	8145	36	-36	47201	-36	-18052	5prime_fragment	FALSE	canonical	3	161	junction_5	10.2878569196893	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGGTCTCAGTTTGGTGC	-98922806	True	NA	NA	False	AAAACA	-29	NA	98929043	98901185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_98901336_98902899_98902965_98903791_98903909_98904896_98905099_98926333_98926535_98928538
transcript_160985.known	chr5	-	784	1	FSM	ENSG00000270388.1	ENST00000603219.1	784	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTCTTTTAGTATAAACAG	NA	False	NA	NA	False	NA	NA	NA	100051916	100051132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_100051100_100051900
transcript_160986.known	chr5	+	1287	3	FSM	ENSG00000174132.9	ENST00000312637.5	1287	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	5.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTCCAAATTATGTGTTT	100534911	True	NA	11	True	AATAAA	-23	NA	100535373	100586741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_100535965_100562053_100562189_100586180
transcript_160987.known	chr5	-	5069	13	FSM	ENSG00000173930.9	ENST00000310954.7	5069	13	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_11	7.09998043815772	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCGTGTTTGAGCTTATT	-102295600	True	NA	3	True	ATTAAA	-20	NA	102296284	102233985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_102237019_102239250_102239389_102240717_102240783_102247251_102247443_102249637_102249789_102257114_102257311_102257942_102258088_102260212_102260320_102261911_102262034_102263683_102263781_102270623_102270807_102291342_102291607_102295907
transcript_160989.known	chr5	-	944	2	FSM	ENSG00000250682.6	ENST00000510145.1	944	2	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAGAAGGAGGCAGAATG	-102671486	False	NA	NA	False	NA	NA	NA	102671559	102609155	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_102609767_102671226
transcript_160995.known	chr5	+	3993	26	FSM	ENSG00000145730.21	ENST00000684529.1	3993	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_24	59.3302081573965	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCAGTGTATTTTCCAG	102753860	True	NA	13	True	AATAAA	-18	NA	102755304	103029716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_102755349_102865822_102866285_102867272_102867394_102901355_102901414_102913933_102914022_102924956_102925043_102926584_102926669_102946836_102946886_102948377_102948446_102949536_102949618_102949901_102949979_102950716_102950821_102959874_102960060_102961157_102961230_102974115_102974437_102990271_102990402_103003032_103003150_103005153_103005227_103006800_103007012_103007456_103007658_103009750_103009867_103017333_103017434_103019789_103019844_103025130_103025335_103028181_103028239_103028886
transcript_161002.nic	chr5	+	3948	25	NIC	ENSG00000145730.21	novel	3993	26	NA	NA	-155	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_23	50.0301992134084	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTCAGTGTATTTTC	102754958	True	NA	10	True	AATAAA	-15	NA	102755142	103029713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_102755349_102865822_102866285_102867272_102867394_102901355_102901414_102913933_102914022_102924956_102925043_102926584_102926669_102946836_102946886_102948377_102948446_102949536_102949618_102949901_102949979_102950716_102950821_102959874_102960060_102961157_102961230_102974115_102974437_102990271_102990402_103003032_103003150_103005153_103005227_103006800_103007012_103007456_103007658_103009750_103009867_103017333_103017434_103019789_103019844_103028181_103028239_103028886
transcript_161003.known	chr5	+	3430	25	FSM	ENSG00000145730.21	ENST00000455264.7	3430	25	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_23	51.5127916961732	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTTGGTGGATGTAAAT	102753860	True	NA	NA	False	NA	NA	NA	102755304	103029360	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_102755349_102865822_102866285_102867272_102867394_102901355_102901414_102913933_102914022_102924956_102925043_102926584_102926669_102946836_102946886_102948377_102948446_102949536_102949618_102949901_102949979_102950716_102950821_102959874_102960060_102961157_102961230_102974115_102974437_102990271_102990402_103003032_103003150_103005153_103005227_103006800_103007012_103007456_103007658_103009750_103009867_103017333_103017434_103019789_103019844_103028184_103028239_103028886
transcript_161007.known	chr5	+	3649	25	FSM	ENSG00000145730.21	ENST00000348126.7	3649	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	54.3076210888797	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTCAGTGTATTTTC	102753877	True	NA	10	True	AATAAA	-15	NA	102755321	103029713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_102755349_102865822_102866285_102867272_102867394_102901355_102901414_102913933_102914022_102924956_102925043_102926584_102926669_102946836_102946886_102948377_102948446_102949536_102949618_102949901_102949979_102950716_102950821_102959874_102960060_102961157_102961230_102990271_102990402_103003032_103003150_103005153_103005227_103006800_103007012_103007456_103007658_103009750_103009867_103017333_103017434_103019789_103019844_103025130_103025335_103028184_103028239_103028886
transcript_161012.known	chr5	+	3978	24	FSM	ENSG00000145730.21	ENST00000510208.2	3978	24	0	0	0	0	multi-exon	TRUE	canonical	3	57	junction_22	44.1190604317878	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCATTAGCTGTCAGTGT	102754754	True	NA	4	True	AATAAA	-9	NA	102754782	103029707	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_102755349_102865822_102866285_102867272_102867394_102901355_102901414_102913933_102914022_102924956_102925043_102926584_102926669_102946836_102946886_102948377_102948446_102949536_102949618_102949901_102949979_102950716_102950821_102959874_102960060_102961157_102961230_102990271_102990402_103003032_103003150_103005153_103005227_103006800_103007012_103007456_103007658_103009750_103009867_103017333_103017434_103019789_103019844_103028184_103028239_103028886
transcript_161029.known	chr5	-	3549	8	FSM	ENSG00000145723.17	ENST00000399004.7	3549	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	10.5017005425652	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTTTGTGGGACTTTGT	-103119475	True	NA	-3	True	AATAAA	-19	NA	103120138	103085999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_103088173_103096540_103096827_103097313_103097491_103097589_103097782_103104540_103104847_103106715_103106910_103108568_103108715_103120063
transcript_161037.nic	chr5	+	5498	28	NIC	ENSG00000145725.20	novel	15407	30	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	42.6617474016012	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTATCTCTTACTTTTT	103116726	True	NA	45	True	ATTAAA	-45	NA	103120251	103203236	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_103120489_103129305_103129704_103133452_103133649_103136731_103136823_103138383_103138470_103146526_103146682_103147930_103148033_103149151_103149314_103151252_103151375_103152647_103152750_103153847_103153935_103154669_103154746_103154833_103154944_103155908_103155995_103158187_103158314_103158451_103158574_103159145_103159329_103167178_103167321_103168071_103168296_103173154_103173283_103173857_103173973_103177666_103177775_103177863_103177981_103180020_103180189_103184671_103184745_103190841_103190983_103194899_103195026_103201521
transcript_161040.known	chr5	+	15407	30	FSM	ENSG00000145725.20	ENST00000321521.13	15407	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	52.8265057961006	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTTAGTTGTTTATTT	NA	False	NA	7	True	AGTAAA	-22	NA	103120199	103212799	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_103120489_103129305_103129704_103133452_103133649_103136731_103136823_103138383_103138470_103146526_103146682_103147930_103148033_103149151_103149314_103151252_103151375_103152647_103152750_103153847_103153935_103154669_103154746_103154833_103154944_103155908_103155995_103158187_103158314_103158451_103158574_103159145_103159329_103167178_103167321_103168071_103168296_103173154_103173283_103173857_103173973_103177666_103177775_103177863_103177981_103180020_103180189_103183233_103183408_103184671_103184745_103186319_103186440_103190841_103190983_103194899_103195026_103201521
transcript_161042.known	chr5	+	1516	13	FSM	ENSG00000145725.20	ENST00000507921.5	1516	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	51.3290041464538	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTATGTATCCTGGAGGT	103116728	True	NA	NA	False	NA	NA	NA	103120253	103158289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_103120489_103136731_103136823_103138383_103138470_103146526_103146682_103147930_103148033_103149151_103149314_103151252_103151375_103152647_103152750_103153847_103153935_103154669_103154746_103154833_103154944_103155908_103155995_103158187
transcript_161044.known	chr5	+	2988	3	FSM	ENSG00000181751.10	ENST00000319933.7	2988	3	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	22.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTTGTTTTTT	103257392	True	NA	13	True	AATAAA	-15	NA	103258762	103278660	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_103258897_103265907_103265998_103275896
transcript_161047.known	chr5	+	1573	3	FSM	ENSG00000181751.10	ENST00000515669.5	1573	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	58	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGGATACAAAGTATTTA	103258453	True	NA	5	True	AATAAA	-7	NA	103259035	103277228	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_103259187_103265907_103265998_103275896
transcript_161050.known	chr5	-	3488	7	FSM	ENSG00000112874.10	ENST00000230792.7	3488	7	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_5	8.4803694888057	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTGTGTGTGTGTT	-103561485	True	NA	-4	True	ATTAAA	-14	NA	103562789	103548854	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_103550972_103552216_103552417_103554739_103554854_103555930_103556099_103558878_103559469_103560042_103560255_103562702
transcript_161051.known	chr5	-	1781	7	FSM	ENSG00000112874.10	ENST00000507423.1	1781	7	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	28.318133177642	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAACTGATGATGAAGAAA	-103561485	True	NA	NA	False	CATAAA	-22	NA	103562789	103550507	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_103550972_103552216_103552417_103554739_103554854_103555930_103556099_103558878_103559469_103560096_103560255_103562702
transcript_161060.known	chr5	-	931	2	FSM	ENSG00000184349.14	ENST00000504941.1	931	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTATTTTTTTTAAATGAA	-107670875	False	NA	NA	False	NA	NA	NA	107670885	107426975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_107427510_107670488
transcript_161061.known	chr5	-	436	1	FSM	ENSG00000272523.1	ENST00000606054.1	436	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAATCATTGCTCTTTGT	-108727993	True	NA	-8	True	ATTAAA	-19	NA	108728260	108727824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_108727800_108728300
transcript_161067.known	chr5	+	1420	11	FSM	ENSG00000151422.14	ENST00000618353.1	1420	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	9.2	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATGGCGCCAAACTCAG	108924509	True	NA	-84	True	NA	NA	NA	108924605	109187578	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_108924790_108946129_108946223_108954728_108954933_108959224_108959348_109037421_109037479_109044679_109044796_109047103_109047199_109100395_109100520_109180746_109180902_109186199_109186323_109187432
transcript_161072.known	chr5	-	4856	10	FSM	ENSG00000198961.10	ENST00000361189.7	4856	10	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_4	22.0543660468488	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATTTCTAATATTTAATT	-109404534	True	NA	-16	True	AATAAA	-17	NA	109409974	109334721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_109337357_109344189_109344312_109344704_109344820_109355914_109356027_109362839_109363023_109368560_109368747_109378203_109379255_109381502_109381704_109383402_109383521_109409841
transcript_161078.known	chr5	+	6553	22	FSM	ENSG00000112893.10	ENST00000261483.5	6553	22	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	43.8492056309703	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTCCTCTAGAGTAGTT	109687076	True	NA	18	True	AATAAA	-19	NA	109689926	109869625	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_109690553_109713519_109713775_109716119_109716265_109729341_109729514_109755328_109755457_109767534_109767709_109770354_109770542_109774787_109774966_109781395_109781599_109784743_109784927_109788933_109789049_109789459_109789528_109817272_109817439_109819668_109819888_109820219_109820343_109823722_109823838_109842327_109842462_109845864_109846007_109847656_109847791_109855139_109855335_109865035_109865147_109866845
transcript_161082.nic	chr5	+	4012	19	ISM	ENSG00000112893.10	ENST00000261483.5	6553	22	-562	21852	-562	-17642	5prime_fragment	FALSE	canonical	3	137	junction_1	35.229757343319	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGCTGTTAATACGGTA	NA	False	NA	-10	True	NA	NA	NA	109689364	109847773	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_109690553_109713519_109713775_109716119_109716265_109729341_109729514_109755328_109755457_109767534_109767709_109770354_109770542_109774787_109774966_109781395_109781599_109784743_109784927_109788933_109789049_109789459_109789528_109817272_109817439_109819668_109819888_109820219_109820343_109823722_109823838_109842327_109842462_109845864_109846007_109847656
transcript_161088.nic	chr5	+	3299	14	ISM	ENSG00000112893.10	ENST00000261483.5	6553	22	-562	49820	-562	-82	5prime_fragment	FALSE	canonical	3	137	junction_1	31.6626074425208	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATATGATAAATACTGAAG	NA	False	NA	NA	False	AATAAA	-30	NA	109689364	109819805	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_109690553_109713519_109713775_109716119_109716265_109729341_109729514_109755328_109755457_109767534_109767709_109770354_109770542_109774787_109774966_109781395_109781599_109784743_109784927_109788933_109789049_109789459_109789528_109817272_109817439_109819668
transcript_161090.nic	chr5	+	2969	12	ISM	ENSG00000112893.10	ENST00000261483.5	6553	22	-562	80125	-562	-30387	5prime_fragment	FALSE	canonical	3	137	junction_1	25.342937138578	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATAAGGCTGAGTGCGG	NA	False	NA	NA	False	NA	NA	NA	109689364	109789500	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_109690553_109713519_109713775_109716119_109716265_109729341_109729514_109755328_109755457_109767534_109767709_109770354_109770542_109774787_109774966_109781395_109781599_109784743_109784927_109788933_109789049_109789459
transcript_161091.nic	chr5	+	2676	10	ISM	ENSG00000112893.10	ENST00000261483.5	6553	22	-562	84836	-562	-35098	5prime_fragment	FALSE	canonical	3	137	junction_1	24.6386226967958	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAGATAAATAAATTTCT	NA	False	NA	NA	False	NA	NA	NA	109689364	109784789	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_109690553_109713519_109713775_109716119_109716265_109729341_109729514_109755328_109755457_109767534_109767709_109770354_109770542_109774787_109774966_109781395_109781599_109784743
transcript_161097.known	chr5	-	437	3	FSM	ENSG00000186952.15	ENST00000502857.6	437	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAACTGAATGGTTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	110726705	110666645	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_110666867_110667227_110667365_110726626
transcript_161100.known	chr5	+	4745	8	FSM	ENSG00000164209.17	ENST00000355943.8	4745	8	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_5	15.4219562537921	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGTTTTTCTCCTACT	110736088	True	NA	8	True	AATAAA	-14	NA	110739006	110765157	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_110739403_110742046_110742090_110743729_110743788_110746268_110746347_110748162_110748264_110755464_110755522_110756701_110756760_110761203
transcript_161106.known	chr5	+	6416	23	FSM	ENSG00000134987.13	ENST00000513710.4	6416	23	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_7	27.7236957454291	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGTTTTACTTTTGTTA	111085116	True	NA	27	True	AATAAA	-16	NA	111092347	111130502	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_111092619_111094919_111094948_111097078_111097180_111098721_111098840_111100588_111100722_111102344_111102400_111103785_111103919_111104176_111104353_111104696_111104818_111105294_111105361_111106056_111106144_111107293_111107440_111110188_111110304_111110787_111110954_111111169_111111279_111113073_111113154_111119012_111119121_111120495_111120594_111120995_111121142_111123804_111123925_111124107_111124190_111125607_111125796_111126733
transcript_161115.nic	chr5	+	2304	19	ISM	ENSG00000134987.13	ENST00000513710.4	6416	23	-47	9361	-20	-9361	5prime_fragment	FALSE	canonical	3	225	junction_7	22.2866427360526	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATAATTAACATTCTTTA	111085069	True	NA	NA	False	NA	NA	NA	111092300	111121141	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_111092619_111094919_111094948_111097078_111097180_111098721_111098840_111100588_111100722_111102344_111102400_111103785_111103919_111104176_111104353_111104696_111104818_111105294_111105361_111106056_111106144_111107293_111107440_111110188_111110304_111110787_111110954_111111169_111111279_111113073_111113154_111119012_111119121_111120495_111120594_111120995
transcript_161118.known	chr5	+	2411	2	FSM	ENSG00000145777.15	ENST00000379706.4	2411	2	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTAAGCATATAAAGTTG	111073068	True	NA	NA	False	AATAAA	-19	NA	111073313	111078024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_111073646_111075945
transcript_161119.known	chr5	+	562	2	FSM	ENSG00000134987.13	ENST00000515784.1	562	2	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGGCTCATTTAGAATGT	111085115	True	NA	NA	False	NA	NA	NA	111092346	111095209	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_111092619_111094919
transcript_161120.known	chr5	+	11942	11	FSM	ENSG00000152495.11	ENST00000282356.9	11942	11	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	6.38827050147378	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCATTCTGTGATTTCA	111223463	True	NA	6	True	AATAAA	-22	NA	111224383	111494886	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_111224645_111344023_111344103_111374849_111374913_111376859_111376943_111394709_111394783_111446685_111446777_111449128_111449204_111473310_111473387_111478380_111478508_111482784_111482938_111484025
transcript_161125.known	chr5	+	4215	5	FSM	ENSG00000246859.3	ENST00000666013.1	4215	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	22.5166604983954	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACAGGAAGTCTTCCCTG	NA	False	NA	NA	False	NA	NA	NA	111510395	111731029	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_111512509_111669418_111669636_111727944_111728067_111728536_111728761_111729490
transcript_161126.known	chr5	-	803	6	FSM	ENSG00000164211.13	ENST00000505803.5	803	6	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_5	93.7174476818484	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAATACATTCAAACTTGT	-111507791	True	NA	NA	False	NA	NA	NA	111512562	111499881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_111500107_111501001_111501117_111501961_111502089_111506329_111506380_111507328_111507443_111512390
transcript_161132.known	chr5	-	1135	5	FSM	ENSG00000164211.13	ENST00000511137.5	1135	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	103.509359480194	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCAATTTAAAATGTGGAA	-111507764	True	NA	NA	False	NA	NA	NA	111512535	111499401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_111500107_111501001_111501117_111506329_111506380_111507328_111507443_111512384
transcript_161136.known	chr5	-	1467	5	FSM	ENSG00000164211.13	ENST00000502322.5	1467	5	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_4	16.5435032565657	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCTATTAATAGTGCTA	-111507819	True	NA	NA	False	TTTAAA	-44	NA	111512590	111500146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_111501117_111501961_111502089_111506329_111506380_111507328_111507443_111512384
transcript_161143.known	chr5	-	704	5	FSM	ENSG00000134986.14	ENST00000419114.6	704	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	615.472328784975	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCACGTTTACAACCCTT	-111757543	False	NA	70	True	NA	NA	NA	111757555	111730703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_111731047_111735429_111735508_111755769_111755831_111757135_111757180_111757377
transcript_161144.known	chr5	-	2581	5	FSM	ENSG00000134986.14	ENST00000379671.7	2581	5	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_4	471.795241603813	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAGTCATTAAGGCTTA	-111754508	True	NA	NA	False	GATAAA	-15	NA	111757724	111728811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_111731047_111735429_111735508_111755769_111755831_111757135_111757180_111757561
transcript_161145.known	chr5	-	698	5	FSM	ENSG00000134986.14	ENST00000455559.6	698	5	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_4	551.696191304598	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGCCTTGCTTTAGAGAA	NA	False	NA	-32	True	AAGAAA	-11	NA	111758218	111730805	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_111731047_111735429_111735508_111755769_111755831_111757135_111757180_111757944
transcript_161146.known	chr5	-	540	5	FSM	ENSG00000134986.14	ENST00000508870.5	540	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	659.006212034454	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATCATATATGGGATTTT	-111757631	False	NA	-23	True	NA	NA	NA	111757643	111730867	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_111731047_111735429_111735508_111755769_111755927_111757135_111757180_111757561
transcript_161147.known	chr5	-	801	5	FSM	ENSG00000134986.14	ENST00000515855.5	801	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	652.164089781092	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAACCTAGTAGTTTATGT	-111747579	True	NA	NA	False	NA	NA	NA	111757194	111730516	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_111731047_111734669_111734743_111735429_111735508_111755769_111755831_111757135
transcript_161148.known	chr5	-	1942	4	FSM	ENSG00000134986.14	ENST00000257435.12	1942	4	0	0	0	0	multi-exon	FALSE	canonical	3	1259	junction_3	127.439746111207	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTGATTTGGCTCATCA	-111747579	True	NA	-5	True	AATAAA	-20	NA	111757194	111729302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_111731047_111735429_111735508_111755769_111755831_111757135
transcript_161150.known	chr5	-	577	3	FSM	ENSG00000134986.14	ENST00000507742.5	577	3	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_2	728	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAACTCAAACTCCCACCG	-111757217	False	NA	NA	False	NA	NA	NA	111757229	111730641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_111731047_111735429_111735508_111757135
transcript_161161.known	chr5	+	3511	3	FSM	ENSG00000224032.8	ENST00000663232.1	3511	3	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_2	3.5	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTGATAACATCTCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112160525	112164818	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_112161296_112161702_112161776_112162150
transcript_161162.known	chr5	+	2621	3	FSM	ENSG00000224032.8	ENST00000413221.7	2621	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	201	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATATGCAGTCTGAAAG	112150010	True	NA	-3	True	AATAAA	-28	NA	112160871	112164257	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_112161296_112161685_112161776_112162150
transcript_161169.nic	chr5	+	3566	16	NIC	ENSG00000134982.17	novel	3602	14	NA	NA	0	-297	combination_of_known_junctions	FALSE	canonical	3	21	junction_11	8.94923957042658	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAATAGAAGATGAAATAAAA	112705096	True	NA	NA	False	AATGAA	-23	NA	112707497	112838757	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_112707883_112754872_112755026_112766325_112766411_112767188_112767391_112775628_112775738_112780789_112780904_112792445_112792530_112801278_112801384_112815494_112815594_112818965_112819345_112821895_112821992_112827107_112827248_112827928_112828007_112828855_112828973_112834950_112835166_112837552
transcript_161173.known	chr5	+	10704	16	FSM	ENSG00000134982.17	ENST00000257430.9	10704	16	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	11.6382511095477	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGGTCATACTGGTTTCC	112737148	True	NA	2	True	CATAAA	-18	NA	112737884	112846239	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_112737926_112754872_112755026_112766325_112766411_112767188_112767391_112775628_112775738_112780789_112780904_112792445_112792530_112801278_112801384_112815494_112815594_112818965_112819345_112821895_112821992_112827107_112827248_112827928_112828007_112828855_112828973_112834950_112835166_112837552
transcript_161180.nic	chr5	+	868	5	NIC	ENSG00000134982.17	novel	3602	14	NA	NA	0	8349	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	9.65336728815391	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGTATTACGCTCAACT	112705096	True	NA	NA	False	AAGAAA	-9	NA	112707497	112775671	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_112707883_112754872_112755026_112766325_112766411_112767188_112767391_112775628
transcript_161184.known	chr5	+	937	5	FSM	ENSG00000153037.15	ENST00000282999.7	937	5	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_4	332.835826647313	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAGGAGAGGAGGGATAAT	112853899	True	NA	44	True	AATAAA	-41	NA	112861304	112867935	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_112861418_112862507_112862584_112864456_112864529_112864620_112864733_112867371
transcript_161186.known	chr5	+	2776	5	FSM	ENSG00000153037.15	ENST00000505459.6	2776	5	0	0	0	0	multi-exon	FALSE	canonical	3	919	junction_3	341.547580872709	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTGTGAAGGTGCCTGC	112853881	True	NA	NA	False	NA	NA	NA	112861286	112869788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_112861418_112862507_112862584_112864456_112864529_112864620_112864733_112867403
transcript_161188.known	chr5	-	3008	5	FSM	ENSG00000129625.13	ENST00000379638.9	3008	5	0	0	0	0	multi-exon	FALSE	canonical	3	777	junction_2	29.0118510267787	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTATATTTCATTTTATT	-112913865	True	NA	-12	True	AATAAA	-32	NA	112922227	112876384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_112878836_112887014_112887184_112902379_112902519_112921162_112921257_112922072
transcript_16119.known	chr1	-	1607	4	FSM	ENSG00000132716.19	ENST00000610139.5	1607	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	120.781713111804	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTATACTGTTGTTATTCT	-160250398	True	NA	40	True	AATAAA	-17	NA	160262425	160239221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_160240371_160243959_160244035_160261284_160261359_160262116
transcript_161192.known	chr5	+	833	4	FSM	ENSG00000153037.15	ENST00000445150.3	833	4	0	0	0	0	multi-exon	FALSE	canonical	3	919	junction_3	56.3875478767747	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTTGCTTATTGGCATT	112853926	True	NA	NA	False	AATACA	-32	NA	112861331	112865219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_112861418_112862507_112862584_112864456_112864529_112864620
transcript_161195.known	chr5	+	631	3	FSM	ENSG00000153037.15	ENST00000515755.1	631	3	0	0	0	0	multi-exon	FALSE	canonical	3	983	junction_1	37	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAATGAGACCCACTAAAC	112853920	True	NA	NA	False	NA	NA	NA	112861325	112864919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_112861418_112862507_112862584_112864456
transcript_161198.known	chr5	-	8295	19	FSM	ENSG00000171444.18	ENST00000408903.7	8295	19	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_16	14.7986485869487	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTACCTTAACTGTGTT	-113488116	True	NA	-6	True	AATAAA	-15	NA	113488453	113022105	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_113027483_113028933_113029057_113043529_113043631_113049092_113049300_113053724_113053960_113063983_113064168_113068079_113068184_113071093_113071235_113082859_113083009_113084100_113084191_113085163_113085311_113101738_113101946_113104191_113104356_113122683_113122827_113143217_113143361_113151308_113151423_113340518_113340731_113384967_113385213_113488244
transcript_161201.known	chr5	-	8257	17	FSM	ENSG00000171444.18	ENST00000302475.8	8257	17	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_12	5.94243216200236	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTAACTGTGTTATTTAAA	-113294194	True	NA	1	True	AATAAA	-22	NA	113294949	113022098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_113027483_113028933_113029057_113043529_113043631_113049092_113049300_113053724_113053960_113063983_113064168_113068079_113068184_113071093_113071235_113082859_113083009_113084100_113084191_113085163_113085311_113101738_113101946_113104191_113104356_113122683_113122827_113143217_113143361_113151308_113151423_113294328
transcript_161206.known	chr5	-	2855	14	FSM	ENSG00000171444.18	ENST00000514701.5	2855	14	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_9	5.96637520912779	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTTTCACATATCACAG	-113294183	True	NA	NA	False	NA	NA	NA	113294938	113048875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_113049300_113053724_113053960_113063983_113064168_113068079_113068184_113071093_113071235_113082859_113083009_113084100_113084191_113085163_113085311_113101738_113101946_113104191_113104356_113122683_113122827_113143217_113143361_113151308_113151423_113294328
transcript_161207.nic	chr5	-	2704	6	ISM	ENSG00000171444.18	ENST00000514701.5	2855	14	-49	51589	-38	1035	5prime_fragment	FALSE	canonical	3	30	junction_1	7.863841300535	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAAAAATACATCTAGTGG	-113294232	True	NA	NA	False	NA	NA	NA	113294987	113100464	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_113101946_113104191_113104356_113122683_113122827_113143217_113143361_113151308_113151423_113294328
transcript_161209.nnic	chr5	+	2018	12	NNC	ENSG00000172795.17	novel	4679	12	NA	NA	0	844	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_11	81.9970771500852	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCTGGTTTTCTGCTAC	112963418	True	NA	35	True	AATAAA	-32	NA	112976709	113020967	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_112976987_112985834_112985987_112992120_112992249_112992671_112992771_113001083_113001237_113001356_113001470_113001566_113001675_113003941_113004078_113007937_113008043_113010755_113010808_113013320_113013393_113020344
transcript_16121.known	chr1	-	1426	4	FSM	ENSG00000132716.19	ENST00000475733.5	1426	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	153.527413404469	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTATACTGTTGTTATTCT	-160250409	True	NA	40	True	AATAAA	-17	NA	160262436	160239221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_160240371_160243959_160244035_160261284_160261326_160262275
transcript_161212.known	chr5	+	10110	11	FSM	ENSG00000172795.17	ENST00000389063.3	10110	11	0	0	0	0	multi-exon	FALSE	canonical	2	232	junction_2	31.3502791056156	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTATATCAAATAACGCAA	112963506	True	NA	3	True	AATAAA	-20	NA	112976797	113022195	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_112976987_112985834_112985987_112992120_112992249_112992671_112992771_113001083_113001237_113001356_113001470_113001566_113001675_113003941_113004078_113007937_113008043_113010755_113010808_113013320
transcript_161220.known	chr5	+	1302	10	FSM	ENSG00000172795.17	ENST00000502635.2	1302	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	120.451106826805	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCTTCAGCCAGCAAAGC	112963418	True	NA	NA	False	AAGAAA	-9	NA	112976709	113008005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_112976987_112985834_112985987_112992120_112992249_112992671_112992771_112993105_112993174_113001083_113001237_113001356_113001470_113001566_113001675_113003941_113004078_113007937
transcript_161221.known	chr5	+	8029	10	FSM	ENSG00000172795.17	ENST00000515408.5	8029	10	0	0	0	0	multi-exon	TRUE	canonical	2	14	junction_8	88.5029119978476	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAGCAAATTATTTTGAG	112963410	True	NA	NA	False	AAAAAG	-25	NA	112976701	113020123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_112976987_112985834_112985987_112992120_112992249_112992671_112992771_113001083_113001237_113001356_113001470_113001566_113001675_113003941_113004078_113010755_113010808_113013320
transcript_161224.nic	chr5	+	1234	9	ISM	ENSG00000172795.17	ENST00000389063.3	10110	11	-88	14190	0	0	5prime_fragment	FALSE	canonical	2	232	junction_2	30.6053508393549	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCTTCAGCCAGCAAAGC	112963418	True	NA	NA	False	AAGAAA	-9	NA	112976709	113008005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_112976987_112985834_112985987_112992120_112992249_112992671_112992771_113001083_113001237_113001356_113001470_113001566_113001675_113003941_113004078_113007937
transcript_161226.known	chr5	+	1572	9	FSM	ENSG00000172795.17	ENST00000513585.6	1572	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	99.443451267542	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATAGTATATTGGAGTTT	112963418	True	NA	-56	True	NA	NA	NA	112976709	113013849	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_112976987_112992671_112992771_113001083_113001237_113001356_113001470_113001566_113001675_113003941_113004078_113007937_113008043_113010755_113010808_113013320
transcript_161229.nic	chr5	+	540	4	ISM	ENSG00000172795.17	ENST00000502635.2	1302	10	68	15283	-16	6712	5prime_fragment	FALSE	canonical	2	232	junction_2	24.1154629969146	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAGTAAATAAAGAAGA	112963486	True	NA	NA	False	NA	NA	NA	112976777	112992722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_112976987_112985834_112985987_112992120_112992249_112992671
transcript_161232.known	chr5	+	852	2	FSM	ENSG00000172795.17	ENST00000504961.1	852	2	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTGTTGCAGTGTTGT	112963521	True	NA	6	True	ATTAAA	-14	NA	112976812	112984651	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_112976987_112983973
transcript_161233.known	chr5	+	6305	30	FSM	ENSG00000047188.16	ENST00000161863.9	6305	30	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_13	14.1370058570287	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTCAGATCTTATTTCT	113511023	True	NA	15	True	ATTAAA	-16	NA	113513693	113595284	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_113514083_113515271_113515363_113524980_113525178_113526585_113526786_113532878_113533046_113534304_113534408_113535641_113535799_113539073_113539182_113540967_113541117_113542367_113542504_113548540_113548668_113548954_113549021_113553180_113553360_113553589_113553687_113553766_113553855_113553941_113554023_113556051_113556135_113561079_113561186_113563372_113563493_113563858_113564132_113565892_113566020_113567091_113567298_113567653_113567850_113579585_113579696_113581416_113581710_113584301_113584480_113591040_113591245_113591995_113592179_113593302_113593391_113593481
transcript_161235.nic	chr5	+	1422	8	ISM	ENSG00000047188.16	ENST00000515883.5	2629	17	-32	17186	-17	12471	5prime_fragment	FALSE	canonical	3	87	junction_3	14.638501094228	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCAAGGTAAATTTTTTAA	113511006	True	NA	NA	False	TATAAA	-10	NA	113513676	113539174	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_113514083_113515271_113515363_113524980_113525178_113526585_113526786_113532878_113533046_113534304_113534408_113535641_113535799_113539073
transcript_161246.known	chr5	-	4156	10	FSM	ENSG00000152503.10	ENST00000513154.6	4156	10	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_7	10.9149348357714	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGAATTCATGTGTA	-115168256	True	NA	-27	True	AATAAA	-37	NA	115169908	115124771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_115126858_115130591_115130890_115133859_115134148_115136999_115137125_115137362_115137617_115141278_115141375_115144597_115144745_115147068_115147395_115163517_115163753_115169607
transcript_16125.known	chr1	-	548	4	FSM	ENSG00000162735.19	ENST00000524939.1	548	4	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_3	50.2416383313902	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGTCTTATTGTTTGTT	-160276330	True	NA	NA	False	NA	NA	NA	160285141	160282317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_160282503_160282943_160283110_160283529_160283640_160285054
transcript_161253.known	chr5	-	693	2	FSM	ENSG00000152503.10	ENST00000379618.6	693	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGATGTCTCGCTACAGCT	NA	False	NA	3	True	AATAAA	-26	NA	115180546	115171101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_115171223_115179974
transcript_161258.nnic	chr5	-	2591	10	NNC	ENSG00000164219.10	novel	9550	9	NA	NA	-5	1538	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	87.1526261618867	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGGTGGGGGAAAAAGTA	-115258550	True	NA	-33	True	AATAAA	-11	NA	115262882	115210863	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_115212308_115212419_115212584_115216864_115216974_115221823_115222009_115230975_115231022_115236389_115236523_115237857_115238010_115241538_115241607_115253136_115253256_115262711
transcript_16126.known	chr1	-	517	3	FSM	ENSG00000132716.19	ENST00000407642.6	517	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	175.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGGAGGAAGAAGAGCA	-160250421	True	NA	-10	True	NA	NA	NA	160262448	160240101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_160240371_160243959_160244035_160262275
transcript_161260.known	chr5	-	9550	9	FSM	ENSG00000164219.10	ENST00000419445.6	9550	9	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_2	28.4316614885588	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTTCTCAAATGGATTTC	-115258545	True	NA	-9	True	AATAAA	-22	NA	115262877	115204011	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_115212584_115216864_115216974_115221823_115222009_115230975_115231022_115236389_115236523_115237857_115238010_115241538_115241607_115253136_115253256_115262711
transcript_161265.known	chr5	+	944	1	FSM	ENSG00000271797.1	ENST00000606615.1	944	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGACTGCTTGCGTCATT	NA	False	NA	NA	False	NA	NA	NA	115262504	115263448	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_115262500_115263400
transcript_161266.known	chr5	-	2387	10	FSM	ENSG00000164221.13	ENST00000379611.10	2387	10	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_3	18.7978196791904	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTGGCTAATGCAGTT	-115295058	True	NA	-11	True	TATAAA	-19	NA	115296654	115267189	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_115267919_115268881_115269001_115269702_115269799_115271212_115271627_115275215_115275607_115275993_115276070_115276964_115277055_115279646_115279769_115284786_115284909_115296426
transcript_161268.nic	chr5	-	1177	7	ISM	ENSG00000164221.13	ENST00000506442.5	2145	9	14	4129	14	-1905	5prime_fragment	FALSE	canonical	3	105	junction_1	13.6798716693136	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGGAACAAAGAAAGAAACA	-115296646	False	NA	NA	False	AATAAA	-25	NA	115296679	115271503	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_115271627_115275215_115275607_115275993_115276070_115276964_115277055_115279646_115279769_115284786_115284909_115296426
transcript_161269.nic	chr5	-	1161	7	ISM	ENSG00000164221.13	ENST00000506442.5	2145	9	-56	4215	-56	-1991	5prime_fragment	FALSE	canonical	3	105	junction_1	13.6798716693136	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAGGAAATTTTCAAGTTA	-115296716	False	NA	NA	False	AAAAAG	-11	NA	115296749	115271589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_115271627_115275215_115275607_115275993_115276070_115276964_115277055_115279646_115279769_115284786_115284909_115296426
transcript_16127.known	chr1	-	728	3	FSM	ENSG00000132716.19	ENST00000447377.5	728	3	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	140.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGACCTGAAGGTGGTGGT	-160250487	True	NA	NA	False	NA	NA	NA	160262514	160239783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_160240371_160243959_160244035_160262448
transcript_161271.nic	chr5	-	1039	6	ISM	ENSG00000164221.13	ENST00000506442.5	2145	9	26	7844	-13	116	5prime_fragment	FALSE	canonical	3	115	junction_2	10.3266645147405	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGTAATAATTATAATAGC	-115295071	True	NA	NA	False	AAGAAA	-9	NA	115296667	115275218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_115275607_115275993_115276070_115276964_115277055_115279646_115279769_115284786_115284909_115296426
transcript_161274.nic	chr5	-	434	2	ISM	ENSG00000164221.13	ENST00000506442.5	2145	9	-56	17423	-56	-9459	5prime_fragment	FALSE	canonical	3	141	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAATCAGTAAGTATA	-115296716	False	NA	-10	True	AAGAAA	-28	NA	115296749	115284797	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_115284909_115296426
transcript_161276.known	chr5	-	5697	3	FSM	ENSG00000145780.8	ENST00000274457.5	5697	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	9	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGTGTATTCTTATTAA	-115542300	True	NA	-3	True	AATAAA	-18	NA	115544775	115520907	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_115525618_115542949_115543684_115544522
transcript_161278.known	chr5	-	3453	4	FSM	ENSG00000251201.8	ENST00000333314.3	3453	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	161.691750631324	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCTTGACTAAACTTGTT	-115620138	True	NA	NA	False	AATAAA	-14	NA	115626014	115578650	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_115581316_115616317_115616446_115620434_115620681_115625600
transcript_161279.nnic	chr5	-	3831	4	NNC	ENSG00000134970.14	novel	3918	3	NA	NA	-1755	-293	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_3	161.222413660963	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACTTTACTTGTTTCTGT	-115634604	True	NA	-70	True	AATAAA	-19	NA	115634747	115613502	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_115616446_115620434_115620681_115625600_115625983_115634487
transcript_161280.known	chr5	-	3918	3	FSM	ENSG00000134970.14	ENST00000456936.4	3918	3	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_1	18.5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTGTATCAGTGTTTT	-115625893	False	NA	0	True	AGTAAA	-22	NA	115626036	115613209	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_115616446_115620434_115620681_115625600
transcript_161283.known	chr5	-	1565	5	FSM	ENSG00000129596.5	ENST00000250535.5	1565	5	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	20.2530861845794	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAAGGTGTCTTTCTGAT	-115816635	False	NA	0	True	AATAAA	-17	NA	115816659	115804732	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_115805463_115806348_115806519_115811160_115811316_115813180_115813259_115816227
transcript_161287.known	chr5	+	1276	6	FSM	ENSG00000177879.17	ENST00000316788.12	1276	6	0	0	0	0	multi-exon	FALSE	canonical	3	1001	junction_3	114.305555420548	212	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGATGTTAATGTCGATTT	115836043	True	NA	4	True	AATAAA	-22	NA	115841934	115914081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_115842107_115866669_115866762_115870016_115870129_115895086_115895159_115902884_115902993_115913361
transcript_16129.known	chr1	-	439	3	FSM	ENSG00000132716.19	ENST00000419626.1	439	3	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	138.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGCCTCAGACCTGAGTT	-160250380	True	NA	NA	False	NA	NA	NA	160262407	160240297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_160240371_160243959_160244035_160262116
transcript_161298.known	chr5	-	1082	5	FSM	ENSG00000145782.13	ENST00000379594.7	1082	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	335.766566977714	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTGCCTCCAAGGTTGA	-115841326	True	NA	30	True	NA	NA	NA	115841837	115831545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_115831864_115832601_115832665_115837627_115837765_115840496_115840613_115841389
transcript_161301.known	chr5	-	773	5	FSM	ENSG00000145782.13	ENST00000505993.5	773	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	330.515128246802	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACACCCATTGCTCCTACT	-115836324	True	NA	-8	True	CATAAA	-15	NA	115841565	115831583	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_115831864_115832601_115832665_115837627_115837765_115840817_115840935_115841389
transcript_161306.known	chr5	-	4040	4	FSM	ENSG00000145782.13	ENST00000509910.2	4040	4	0	0	0	0	multi-exon	FALSE	canonical	3	580	junction_3	47.7237420531496	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTCCCTGTTCTTGGAG	-115836324	True	NA	-18	True	AATAAA	-17	NA	115841565	115828199	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_115831864_115832601_115832665_115837627_115837765_115841389
transcript_161315.known	chr5	-	1430	3	FSM	ENSG00000145782.13	ENST00000500945.2	1430	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	333.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTAGGCTGCAGAGGCAA	-115836324	True	NA	NA	False	AATAAA	-14	NA	115841565	115830672	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_115831864_115832601_115832665_115841389
transcript_161319.known	chr5	+	1433	7	FSM	ENSG00000145781.9	ENST00000632434.1	1433	7	0	0	0	0	multi-exon	FALSE	canonical	3	889	junction_3	79.4804308549525	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGTTGAAGTGTACATTT	116077988	True	NA	21	True	AATAAA	-17	NA	116085025	116293286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_116085094_116087496_116087588_116091078_116091190_116092544_116092701_116134067_116134179_116291516_116291577_116292450
transcript_161324.known	chr5	+	870	7	FSM	ENSG00000145781.9	ENST00000507356.5	870	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	360.871822427607	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCCCTTTAAAGGAAACAA	116077978	True	NA	NA	False	AATATA	-43	NA	116085015	116292718	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_116085094_116087496_116087588_116091078_116091190_116092544_116092696_116134067_116134179_116291516_116291577_116292450
transcript_161325.known	chr5	-	1610	1	FSM	ENSG00000271918.1	ENST00000606662.1	1610	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCAGTGGGAGTTGGAT	-116085226	True	NA	NA	False	ATTAAA	-39	NA	116085416	116083806	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_116083800_116085400
transcript_161327.known	chr5	-	4256	20	FSM	ENSG00000092421.17	ENST00000257414.12	4256	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	388.348302986035	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGGAGCTGGAATTCTG	-116574353	False	180	-20	True	AATAAA	-15	NA	116574395	116445749	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_116447812_116467582_116467748_116472884_116472936_116473072_116473094_116475544_116475604_116477845_116477927_116478013_116478155_116478541_116478719_116480121_116480278_116482443_116482576_116486748_116486967_116488107_116488197_116488887_116489008_116491739_116491831_116495412_116495515_116496250_116496314_116497326_116497388_116502209_116502328_116504844_116504983_116574184
transcript_161330.nnic	chr5	-	4566	20	NNC	ENSG00000092421.17	novel	4256	20	NA	NA	-251	0	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_2	368.97047003281	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAATTTAAAAAGACAA	-116575032	False	NA	-46	True	AATACA	-13	NA	116575074	116446133	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_116447812_116467582_116467748_116468849_116468916_116473072_116473094_116475544_116475604_116477845_116477927_116478013_116478155_116478541_116478719_116480121_116480278_116482443_116482576_116486748_116486967_116488107_116488197_116488887_116489008_116491739_116491831_116495412_116495515_116496250_116496314_116497326_116497388_116502209_116502328_116504844_116504983_116574184
transcript_161335.known	chr5	-	6828	19	FSM	ENSG00000092421.17	ENST00000343348.11	6828	19	0	0	0	0	multi-exon	FALSE	canonical	3	1092	junction_9	81.4226892271906	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGTGTCCTGAATGCT	-116542114	True	NA	-2	True	AATAAA	-20	NA	116574823	116443554	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_116447812_116467582_116467748_116473072_116473094_116475544_116475604_116477845_116477927_116478013_116478155_116478541_116478719_116480121_116480278_116482443_116482576_116486748_116486967_116488107_116488197_116488887_116489008_116491739_116491831_116495412_116495515_116496250_116496314_116497326_116497388_116502209_116502328_116504844_116504983_116574184
transcript_161351.nic	chr5	-	4335	18	NIC	ENSG00000092421.17	novel	6828	19	NA	NA	-251	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_1	283.858449543364	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAATTTAAAAAGACAA	-116575032	False	NA	-46	True	AATACA	-13	NA	116575074	116446133	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_116447812_116473072_116473094_116475544_116475604_116477845_116477927_116478013_116478155_116478541_116478719_116480121_116480278_116482443_116482576_116486748_116486967_116488107_116488197_116488887_116489008_116491739_116491831_116495412_116495515_116496250_116496314_116497326_116497388_116502209_116502328_116504844_116504983_116574184
transcript_161354.nic	chr5	-	3832	17	ISM	ENSG00000092421.17	ENST00000343348.11	6828	19	-251	28343	-251	6368	5prime_fragment	FALSE	canonical	3	1092	junction_7	81.6807571815418	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGGGAAGGAAAAGAAAGCAA	-116575032	False	NA	NA	False	AATAAA	-31	NA	116575074	116471897	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_116473094_116475544_116475604_116477845_116477927_116478013_116478155_116478541_116478719_116480121_116480278_116482443_116482576_116486748_116486967_116488107_116488197_116488887_116489008_116491739_116491831_116495412_116495515_116496250_116496314_116497326_116497388_116502209_116502328_116504844_116504983_116574184
transcript_16137.known	chr1	-	5318	33	FSM	ENSG00000122218.16	ENST00000241704.8	5318	33	0	0	0	0	multi-exon	TRUE	canonical	3	721	junction_17	64.4837370485768	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAATATAAAAAGCTATTC	-160328982	True	NA	NA	False	AATAAA	-28	NA	160343250	160288593	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_160290217_160290491_160290687_160291334_160291497_160291818_160291930_160292011_160292199_160292483_160292621_160293165_160293235_160293385_160293464_160294483_160294594_160294767_160294858_160295735_160295860_160296060_160296150_160297342_160297439_160297555_160297746_160298844_160298992_160299101_160299265_160305432_160305572_160305687_160305774_160306353_160306494_160307162_160307246_160309100_160309177_160310191_160310259_160311867_160312019_160313084_160313168_160313989_160314126_160323430_160323531_160325542_160325653_160332447_160332558_160333602_160333680_160335241_160335323_160339908_160339983_160340180_160340295_160343130
transcript_161374.known	chr5	+	617	3	FSM	ENSG00000248663.7	ENST00000504107.2	931	3	314	0	314	0	multi-exon	FALSE	canonical	3	54	junction_2	1.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTAGCATACATTTACTG	117454595	False	NA	NA	False	AATAAA	-17	NA	117455262	117479368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_117455455_117471901_117471939_117478980
transcript_161381.known	chr5	-	5776	6	FSM	ENSG00000169570.10	ENST00000510708.6	5776	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	13.0384048104053	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGCCTCAGGATTATTT	-118987320	True	NA	0	True	ATTAAA	-25	NA	118988547	118836073	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_118841088_118848089_118848219_118928536_118928730_118939195_118939291_118944558_118944650_118988293
transcript_161383.known	chr5	+	327	1	FSM	ENSG00000197744.5	ENST00000397627.3	327	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGACAGCAAAAAAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	118973795	118974122	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_118973800_118974100
transcript_161384.known	chr5	+	11072	43	FSM	ENSG00000172869.15	ENST00000311085.8	11072	43	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_15	21.2359597474321	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGGGGGTATACTATTGT	119071441	False	NA	10	True	AATAAA	-19	NA	119071489	119249127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_119071657_119097978_119098105_119101934_119102007_119105179_119105259_119110150_119110284_119114474_119114542_119116157_119116337_119118814_119119005_119120970_119121140_119129210_119129424_119133131_119133386_119133493_119134179_119134267_119134390_119143840_119143931_119144535_119144639_119146836_119146957_119147248_119147471_119148738_119150422_119151928_119152037_119164506_119164677_119165182_119165281_119166615_119166782_119167602_119167865_119170189_119171281_119171777_119171970_119175260_119175338_119177356_119177485_119177995_119178245_119189707_119189887_119193827_119193971_119196370_119196457_119197754_119197957_119203318_119203437_119216900_119216988_119220471_119220594_119220939_119221082_119224708_119224770_119233339_119233468_119237321_119237415_119238988_119239081_119240418_119240472_119244358_119244577_119246994
transcript_161385.known	chr5	+	1835	13	FSM	ENSG00000172869.15	ENST00000503802.5	1835	13	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	21.4610435181724	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTATTTTTACGCCTAA	119071165	False	NA	5	True	AATAAA	-19	NA	119071204	119133691	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_119071258_119071554_119071657_119097978_119098105_119101934_119102007_119105179_119105259_119110150_119110284_119114474_119114542_119116157_119116337_119118814_119119005_119120970_119121140_119129210_119129424_119133131_119133386_119133493
transcript_161388.nic	chr5	+	2319	12	ISM	ENSG00000172869.15	ENST00000539542.6	11538	44	-69	115436	-69	0	5prime_fragment	FALSE	canonical	3	71	junction_11	16.2831353205631	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTATTTTTACGCCTAA	NA	False	NA	5	True	AATAAA	-19	NA	119071017	119133691	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_119071657_119097978_119098105_119101934_119102007_119105179_119105259_119110150_119110284_119114474_119114542_119116157_119116337_119118814_119119005_119120970_119121140_119129210_119129424_119133131_119133386_119133493
transcript_16139.known	chr1	-	4664	33	FSM	ENSG00000122218.16	ENST00000368069.7	4664	33	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_17	157.881652546892	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCCATTTATTTCTTGG	-160328980	True	NA	-13	True	AATAAA	-21	NA	160343248	160289272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_160290217_160290491_160290687_160291334_160291497_160291818_160291930_160292011_160292199_160292483_160292621_160293165_160293235_160293385_160293464_160294483_160294594_160294767_160294858_160295735_160295860_160296060_160296150_160297342_160297439_160297555_160297746_160298844_160298992_160299101_160299265_160305432_160305599_160305687_160305774_160306353_160306494_160307162_160307246_160309100_160309177_160310191_160310259_160311867_160312019_160313084_160313168_160313989_160314126_160323430_160323531_160325542_160325653_160332447_160332558_160333602_160333680_160335241_160335323_160339908_160339983_160340180_160340295_160343130
transcript_161390.nic	chr5	+	1432	11	ISM	ENSG00000172869.15	ENST00000503802.5	1835	13	-140	4359	-22	0	5prime_fragment	FALSE	canonical	3	35	junction_1	22.8245481882994	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTACAGCAACTTAGAAA	119071006	True	NA	20	True	AATAAA	-31	NA	119071064	119129332	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_119071258_119071554_119071657_119097978_119098105_119101934_119102007_119105179_119105259_119110150_119110284_119114474_119114542_119116157_119116337_119118814_119119005_119120970_119121140_119129210
transcript_161396.nic	chr5	+	772	3	ISM	ENSG00000172869.15	ENST00000539542.6	11538	44	-8	147125	-8	-208	5prime_fragment	FALSE	canonical	3	84	junction_2	10	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTCAGTAATTTATGAT	119068951	True	NA	NA	False	AAGAAA	-3	NA	119071078	119102002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_119071657_119097978_119098105_119101934
transcript_161399.known	chr5	+	795	2	FSM	ENSG00000145779.8	ENST00000274456.6	795	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTGACTGATCATGATT	119267157	True	NA	NA	False	NA	NA	NA	119268691	119393394	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_119268908_119392815
transcript_161402.known	chr5	+	6976	2	FSM	ENSG00000145779.8	ENST00000504771.3	6976	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTATTCATGCTGGTT	119355989	True	NA	10	True	ATTAAA	-20	NA	119356018	119399688	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_119356122_119392815
transcript_161407.known	chr5	+	2589	25	FSM	ENSG00000133835.18	ENST00000645832.1	2589	25	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	306.072431514721	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGTGATAGCATTGATA	119436152	True	NA	26	True	AATAAA	-29	NA	119452537	119542269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_119452634_119456314_119456369_119471635_119471701_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
transcript_161412.known	chr5	+	2881	25	FSM	ENSG00000133835.18	ENST00000414835.7	2881	25	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	344.648369013824	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTGTGATTTTCTGT	119436111	True	NA	12	True	AATAAA	-17	NA	119452496	119542332	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_119452822_119456314_119456369_119471635_119471701_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
transcript_161414.known	chr5	+	2659	25	FSM	ENSG00000133835.18	ENST00000646554.1	2659	25	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	349.083591947067	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGATACCTTTGTTTT	119452700	False	NA	-3	True	AATAAA	-2	NA	119452735	119542317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_119452822_119456314_119456369_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119477797_119477895_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
transcript_16142.known	chr1	-	4239	33	FSM	ENSG00000122218.16	ENST00000647683.1	4239	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	164.032854464433	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGTCTCAAAAAAAAAAAAAA	-160328984	True	NA	NA	False	NA	NA	NA	160343252	160289614	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_160290217_160290491_160290687_160291334_160291497_160291818_160291930_160292011_160292199_160292483_160292561_160293165_160293235_160293385_160293464_160294483_160294594_160294767_160294858_160295735_160295860_160296060_160296150_160297342_160297439_160297555_160297746_160298844_160298992_160299101_160299265_160305432_160305572_160305687_160305774_160306353_160306494_160307162_160307246_160309100_160309177_160310191_160310259_160311867_160312019_160313084_160313168_160313989_160314126_160323430_160323531_160325542_160325653_160332447_160332558_160333602_160333680_160335241_160335323_160339908_160339983_160340180_160340295_160343130
transcript_161420.known	chr5	+	2628	24	FSM	ENSG00000133835.18	ENST00000510025.7	2628	24	0	0	0	0	multi-exon	FALSE	canonical	3	970	junction_8	87.7288096657456	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTGTGATTTTCTGT	119436111	True	NA	12	True	AATAAA	-17	NA	119452496	119542332	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_119452634_119456314_119456369_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
transcript_161425.known	chr5	+	2551	24	FSM	ENSG00000133835.18	ENST00000643250.1	2551	24	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_7	294.011656983773	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTGTGATTTTCTGT	119452717	False	NA	12	True	AATAAA	-17	NA	119452752	119542332	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_119452822_119456314_119456369_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477493_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
transcript_161430.known	chr5	+	2494	23	FSM	ENSG00000133835.18	ENST00000684214.1	2494	23	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_21	234.084735134824	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTTGATACCTTTGTTT	119436090	True	NA	-4	True	AATAAA	-1	NA	119452475	119542316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_119452634_119456314_119456369_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119536422_119536551_119541904
transcript_161431.known	chr5	+	2494	23	FSM	ENSG00000133835.18	ENST00000515320.5	2494	23	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	242.993623016009	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCCTGTTTCCTTAGAAT	119436111	True	NA	9	True	AATAAA	-12	NA	119452496	119542252	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_119452634_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
transcript_161449.known	chr5	+	2855	8	FSM	ENSG00000151304.6	ENST00000339397.5	2855	8	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_5	11.183077594732	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGGAATTCAAGGGATTA	121958432	True	NA	NA	False	GATAAA	-6	NA	121961974	122028633	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_121962069_121974195_121974285_121975314_121975388_121994598_121994671_122019259_122019342_122020087_122020803_122022369_122022408_122026941
transcript_161454.nic	chr5	+	651	6	ISM	ENSG00000151304.6	ENST00000339397.5	2855	8	-31	8336	-31	-8336	5prime_fragment	FALSE	canonical	3	95	junction_5	11.443775600736	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGCAAAGATGGAACATGGA	121958401	True	NA	NA	False	AATACA	-18	NA	121961943	122020297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_121962069_121974195_121974285_121975314_121975388_121994598_121994671_122019259_122019342_122020087
transcript_161456.known	chr5	-	5076	7	FSM	ENSG00000113083.15	ENST00000231004.5	5076	7	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_6	2.49443825784929	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTAGTCATTTGTTGTT	-122078173	False	NA	NA	False	AATAAA	-15	NA	122078259	122063194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_122066750_122070052_122070169_122070493_122070590_122074012_122074170_122075403_122075542_122076892_122077002_122077354
transcript_161463.known	chr5	+	3577	11	FSM	ENSG00000064692.20	ENST00000261368.13	3577	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	12.9	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAGGATCAGACAAGTAT	122312110	True	NA	NA	False	AATAAA	-23	NA	122312236	122464219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_122312285_122391088_122391192_122403792_122403866_122422867_122423740_122425351_122425532_122431968_122432083_122440628_122440755_122444562_122444733_122449844_122449938_122450532_122451602_122463490
transcript_161466.known	chr5	+	2410	9	FSM	ENSG00000064692.20	ENST00000508017.5	2410	9	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	17.900768139943	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAAGTATTTTGATTGCT	122312122	False	NA	70	True	NA	NA	NA	122312248	122464116	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_122312285_122391088_122391192_122403792_122403866_122431968_122432083_122440628_122440755_122444562_122444733_122449844_122449938_122450532_122451602_122463490
transcript_161470.known	chr5	+	6479	15	FSM	ENSG00000205302.7	ENST00000379516.7	6479	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	279.838838459218	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAATTGCCTTCTTACTGC	122768590	True	NA	NA	False	AATAAA	-28	NA	122775079	122834543	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_122775212_122795265_122795384_122799691_122799856_122801868_122801936_122802080_122802125_122803471_122803614_122808276_122808356_122815895_122815972_122816914_122817029_122817279_122817374_122818817_122819024_122826049_122826194_122827378_122827460_122827574_122827647_122829597
transcript_161474.known	chr5	+	2119	15	FSM	ENSG00000205302.7	ENST00000514949.1	2119	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	362.31411138144	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACATGTGGTTTTATAT	122775190	False	NA	NA	False	AATAAA	-18	NA	122775202	122829755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_122775763_122795265_122795384_122799691_122799856_122801868_122801936_122802080_122802125_122803471_122803614_122808276_122808356_122815895_122815972_122816914_122817029_122817279_122817374_122818817_122819024_122826049_122826194_122827378_122827460_122827574_122827647_122829597
transcript_16148.known	chr1	-	5175	32	FSM	ENSG00000122218.16	ENST00000649963.1	5175	32	0	0	0	0	multi-exon	FALSE	canonical	1	17	junction_30	161.8969880988	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTACTGTGCCTTCGAT	-160329005	True	NA	NA	False	AATACA	-41	NA	160343273	160288685	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_160290217_160290491_160290687_160291334_160291497_160291818_160291930_160292011_160292199_160292483_160292621_160293165_160293235_160293385_160293464_160294483_160294594_160294767_160294858_160295735_160295860_160296060_160296150_160297342_160297439_160297555_160297746_160298844_160298992_160299101_160299265_160305432_160305572_160305687_160305774_160306353_160306494_160307162_160307246_160309100_160309177_160310191_160310259_160311867_160312019_160313084_160313168_160313989_160314126_160323430_160323531_160325542_160325653_160332447_160332558_160333602_160333680_160335241_160335323_160340180_160340295_160343130
transcript_161483.known	chr5	+	908	6	FSM	ENSG00000205302.7	ENST00000505854.5	908	6	0	0	0	0	multi-exon	FALSE	canonical	3	1008	junction_4	59.9466429418696	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCACACCTGTAATTCCA	122768605	True	NA	NA	False	AATACA	-36	NA	122775094	122803869	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_122775212_122795265_122795384_122799691_122799856_122801868_122801936_122802080_122802125_122803471
transcript_161484.nic	chr5	+	1148	2	ISM	ENSG00000205302.7	ENST00000505854.5	908	6	-38	7611	-22	-7611	5prime_fragment	FALSE	canonical	3	1176	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATAATTATGTTCTCATC	122768567	True	NA	NA	False	GATAAA	-4	NA	122775056	122796258	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_122775212_122795265
transcript_161486.known	chr5	+	1987	7	FSM	ENSG00000064652.11	ENST00000261369.9	1987	7	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	14.2643689738531	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGAGTTTGTCTTCTCC	122843957	True	NA	14	True	AATAAA	-16	NA	122845612	123009205	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_122845694_122936733_122936818_122946054_122946160_122999911_123000007_123001404_123001438_123001939_123002005_123007681
transcript_161488.known	chr5	+	588	6	FSM	ENSG00000064652.11	ENST00000506996.5	588	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	13.7462722219517	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCGACACTTAGAATTTT	122843970	False	NA	3	True	AATAAA	-16	NA	122845625	123002142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_122845694_122936733_122936818_122946054_122946160_122999911_123000007_123001404_123001438_123001939
transcript_161489.known	chr5	-	1364	5	FSM	ENSG00000168938.6	ENST00000306442.5	1364	5	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_3	14.148763196831	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATGCCCATCCACATC	-123033828	True	NA	NA	False	TATAAA	-31	NA	123036725	123023249	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_123024004_123025783_123025969_123028774_123028869_123029304_123029419_123036508
transcript_161492.known	chr5	-	4993	20	FSM	ENSG00000168944.17	ENST00000306467.10	4993	20	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_13	30.0516637322261	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGAGTTCTTGAGCAGC	-123420625	True	NA	-6	True	AATAAA	-17	NA	123423403	123344891	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_123346754_123349943_123350090_123364495_123364595_123372649_123372773_123377373_123377536_123378335_123378429_123382110_123382201_123382736_123382890_123382985_123383083_123384950_123385134_123386517_123386668_123388431_123388607_123389923_123390141_123391109_123391338_123393299_123393498_123399135_123399285_123412398_123412541_123416009_123416125_123418358_123418516_123422949
transcript_1615.nnic	chr1	-	807	4	NNC	ENSG00000162591.16	novel	7443	37	NA	NA	-46	-97055	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	14.8174071805952	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGCCCTAAAATGTGTTG	-3609646	True	NA	NA	False	AATAAA	-27	NA	3611554	3589782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_3589928_3595337_3595448_3602465_3602601_3611137
transcript_161508.nic	chr5	+	3071	13	NIC	ENSG00000151292.17	novel	4635	13	NA	NA	-18	0	combination_of_known_junctions	TRUE	canonical	2	26	junction_12	69.377990426039	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAGTCTCTTGTATTCAA	NA	False	NA	32	True	AATAAA	-29	NA	123512080	123615455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_123512571_123545416_123545842_123553106_123553148_123557494_123557565_123573392_123573542_123575728_123575964_123588067_123588154_123588426_123588512_123590409_123590559_123591318_123591415_123604723_123604831_123605338_123605363_123614341
transcript_161510.nic	chr5	+	4373	13	NIC	ENSG00000151292.17	novel	4635	13	NA	NA	-18	-283	combination_of_known_junctions	FALSE	canonical	2	26	junction_12	69.377990426039	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTTTTTAAACTTGCT	NA	False	NA	7	True	AATAAA	-12	NA	123512080	123616757	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_123512571_123545416_123545842_123553106_123553148_123557494_123557565_123573392_123573542_123575728_123575964_123588067_123588154_123588426_123588512_123590409_123590559_123591318_123591415_123604723_123604831_123605338_123605363_123614341
transcript_161513.known	chr5	+	4635	13	FSM	ENSG00000151292.17	ENST00000345990.8	4635	13	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_12	65.455402544192	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAATTAAGGGAAATAGCA	123508388	True	NA	NA	False	ATTAAA	-12	NA	123512098	123617040	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_123512571_123545416_123545842_123553106_123553148_123557494_123557565_123573392_123573542_123575728_123575964_123588067_123588154_123588426_123588512_123590412_123590559_123591318_123591415_123604723_123604831_123605338_123605363_123614341
transcript_161522.known	chr5	+	1356	10	FSM	ENSG00000151292.17	ENST00000511130.6	1356	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	89.9919063576083	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCATCTCTGTAGTGAC	123508549	True	NA	NA	False	NA	NA	NA	123512259	123614455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_123512571_123573392_123573542_123575728_123575964_123588067_123588154_123588426_123588512_123590409_123590559_123591318_123591415_123604723_123604831_123605338_123605363_123614341
transcript_161524.known	chr5	+	920	2	FSM	ENSG00000151292.17	ENST00000508708.1	920	2	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAGAATAAAGATGTTG	123508480	True	NA	NA	False	NA	NA	NA	123512190	123545956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_123512571_123545416
transcript_161525.nnic	chr5	+	331	2	FSM	ENSG00000289458.1	ENST00000685834.1	356	2	20	5	20	-5	multi-exon	FALSE	canonical	3	311	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTCCATGTAATTTTG	124496532	True	NA	16	True	AATAAA	-30	NA	124497340	124505105	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_124497592_124505025
transcript_161530.nic	chr5	-	3272	5	ISM	ENSG00000168916.16	ENST00000513986.2	6152	10	-203	11028	-203	294	5prime_fragment	FALSE	canonical	3	7	junction_4	11.6054943884352	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGAAGCGAAAGCTAAAGG	-124746831	False	NA	-22	True	AAAAAG	-6	NA	124746842	124647942	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_124649134_124649609_124649698_124701013_124701270_124744083_124745173_124746194
transcript_161531.known	chr5	-	2605	5	FSM	ENSG00000168916.16	ENST00000509799.5	2605	5	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_4	8.347903928532	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGCAAAAAAGCTACCAACT	-124747479	True	NA	NA	False	GATAAA	-6	NA	124748807	124648236	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_124649134_124649609_124649698_124701013_124701270_124744083_124745173_124748532
transcript_161543.known	chr5	+	1847	15	FSM	ENSG00000155324.10	ENST00000513978.5	1847	15	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	27.0004724070539	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTCTTAACGACTTTCAA	126422264	True	NA	NA	False	NA	NA	NA	126423471	126493326	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_126423690_126465425_126465546_126466293_126466337_126469676_126469789_126472237_126472305_126473264_126473369_126477691_126477788_126480455_126480528_126480626_126480708_126483462_126483575_126484401_126484525_126485685_126485774_126486872_126486978_126488798_126488893_126492914
transcript_161545.known	chr5	+	3109	14	FSM	ENSG00000155324.10	ENST00000515200.5	3109	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	32.7144721245893	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGACAATGCTTCATT	126423125	False	NA	NA	False	AAAAAG	-7	NA	126423145	126494371	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_126423690_126465425_126465546_126466293_126466337_126472237_126472305_126473264_126473369_126477691_126477788_126480455_126480528_126480626_126480708_126483462_126483575_126484398_126484525_126485685_126485774_126486872_126486978_126488798_126488893_126492914
transcript_161547.known	chr5	+	2905	14	FSM	ENSG00000155324.10	ENST00000285689.8	2905	14	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	10.8376944643118	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAAAGACAATG	126422201	True	NA	NA	False	AAGAAA	-26	NA	126423408	126494364	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_126423690_126465425_126465546_126469676_126469789_126472237_126472305_126473264_126473369_126477691_126477788_126480455_126480528_126480626_126480708_126483462_126483575_126484401_126484525_126485685_126485774_126486872_126486978_126488798_126488893_126492914
transcript_161561.known	chr5	-	4765	18	FSM	ENSG00000164904.18	ENST00000409134.8	4765	18	0	0	0	0	multi-exon	FALSE	canonical	3	543	junction_12	80.9200981446329	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGACAATTGGGTTGTCCT	-126582412	True	NA	2	True	AATAAA	-20	NA	126595219	126541840	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_126545020_126546323_126546400_126549928_126550003_126550195_126550294_126552020_126552138_126554286_126554394_126555930_126556016_126559239_126559335_126561082_126561125_126568258_126568357_126570781_126570860_126575419_126575465_126577078_126577212_126582850_126582975_126583931_126584013_126592663_126592730_126593350_126593405_126595006
transcript_161565.known	chr5	-	1126	10	FSM	ENSG00000164904.18	ENST00000413020.6	1126	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	197.251108995615	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCTACATGGTGAAACTC	-126582411	True	NA	NA	False	NA	NA	NA	126595218	126564357	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_126564593_126568258_126568357_126570781_126570860_126575419_126575465_126577078_126577212_126582850_126582975_126583931_126584013_126592663_126592730_126593350_126593405_126595006
transcript_161570.known	chr5	-	887	3	FSM	ENSG00000164904.18	ENST00000635858.1	887	3	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_2	331	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGTGGCAGCATCCCTT	-126594125	False	NA	NA	False	NA	NA	NA	126594138	126591927	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_126592730_126593350_126593405_126594107
transcript_161575.nnic	chr5	+	1961	6	NNC	ENSG00000164902.14	novel	3609	5	NA	NA	-6	761	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	216.265947388857	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCCAGTGGCAGCCTGC	126593941	True	NA	NA	False	AAAAAG	-14	NA	126600918	126626239	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_126601059_126603569_126604184_126608363_126608485_126617249_126617334_126624574_126625310_126625972
transcript_161582.known	chr5	+	3609	5	FSM	ENSG00000164902.14	ENST00000297540.5	3609	5	0	0	0	0	multi-exon	FALSE	canonical	3	486	junction_4	52.5327278941423	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCTTCAAGTGATTATAT	126593969	True	NA	45	True	AATAAA	-24	NA	126600946	126627252	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_126601059_126603569_126604184_126608363_126608485_126617249_126617334_126624574
transcript_161589.nic	chr5	+	951	4	ISM	ENSG00000164902.14	ENST00000297540.5	3609	5	-20	9919	2	0	5prime_fragment	FALSE	canonical	3	487	junction_1	53.8970211504206	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGATAATGTCCTCACC	126593949	True	NA	NA	False	AAAACA	-30	NA	126600926	126617333	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_126601059_126603569_126604184_126608363_126608485_126617249
transcript_161593.known	chr5	+	625	2	FSM	ENSG00000164902.14	ENST00000514725.1	625	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGGAAACGACCTGTCAA	126593947	True	NA	NA	False	NA	NA	NA	126600924	126604064	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_126601059_126603573
transcript_161596.known	chr5	+	3475	12	FSM	ENSG00000113368.12	ENST00000460265.5	3475	12	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_5	131.383861293024	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGATATACTGTCCTTTT	NA	False	NA	12	True	AATAAA	-14	NA	126776622	126837014	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_126777868_126804775_126804933_126805570_126805697_126810179_126810351_126811772_126811899_126815169_126815248_126818921_126819143_126820909_126821136_126822780_126822886_126825987_126826108_126832693_126832802_126836222
transcript_161604.known	chr5	+	2890	11	FSM	ENSG00000113368.12	ENST00000261366.10	2890	11	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_3	30.5162251925103	1362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTGTCCTTTTTAACGC	126764363	True	NA	18	True	AATAAA	-20	NA	126777135	126837020	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_126777868_126804775_126804933_126805570_126805697_126810179_126810351_126811772_126811899_126818921_126819143_126820909_126821136_126822780_126822886_126825987_126826108_126832693_126832802_126836222
transcript_161608.known	chr5	+	1801	11	FSM	ENSG00000113368.12	ENST00000504788.5	1801	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	105.844414118082	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAGGGGAGGGTAAATAA	126764380	True	NA	NA	False	NA	NA	NA	126777152	126836571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_126777245_126804775_126804933_126805570_126805697_126810179_126810351_126811772_126811899_126818921_126819143_126820909_126821136_126822780_126822886_126825987_126826108_126832693_126832802_126836222
transcript_161616.known	chr5	+	1572	6	FSM	ENSG00000113368.12	ENST00000395354.1	1572	6	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_3	20.2622802270623	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTATTTTCTTGGTCATTT	126764416	True	NA	NA	False	AATAAA	-24	NA	126777188	126819234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_126777868_126804775_126804933_126805570_126805697_126810179_126810351_126811772_126811899_126818921
transcript_161622.known	chr5	-	3946	5	FSM	ENSG00000173926.6	ENST00000308660.6	3946	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	10.8282039138539	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGATTTGTCTTTCATTG	-127029962	True	NA	NA	False	AATAAA	-20	NA	127030558	126867713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_126870792_126878184_126878395_126914929_126915135_126917983_126918228_127030349
transcript_161629.known	chr5	-	3017	5	FSM	ENSG00000164241.14	ENST00000535381.6	3017	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	18.2534243362718	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGTGTTGTTTTAAGC	-127073067	True	NA	NA	False	NA	NA	NA	127073506	127045234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_127047916_127052612_127052670_127058881_127059003_127071583_127071686_127073450
transcript_161632.known	chr5	+	7594	26	FSM	ENSG00000145794.17	ENST00000274473.6	7594	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	20.319448811422	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTAGTGTTTCTTTCTATA	127289514	False	NA	3	True	AATAAA	-16	NA	127290858	127461222	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_127291057_127299995_127300047_127331290_127331425_127339119_127339222_127340529_127340631_127369909_127370003_127396531_127396779_127398675_127398797_127402545_127402683_127410388_127410602_127417637_127417813_127419119_127419241_127420043_127420208_127422669_127422773_127433362_127433510_127434686_127434822_127435360_127435490_127438438_127438568_127440738_127440868_127442997_127443127_127445456_127445694_127447556_127447685_127449098_127449223_127454565_127454611_127455400_127455608_127457127
transcript_161634.known	chr5	+	7606	25	FSM	ENSG00000145794.17	ENST00000503335.7	7606	25	0	0	0	0	multi-exon	TRUE	canonical	3	55	junction_22	8.83176086632785	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTAGTGTTTCTTTCTATA	127289451	True	NA	3	True	AATAAA	-16	NA	127290795	127461222	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_127291057_127331290_127331425_127339119_127339222_127340529_127340631_127369909_127370003_127396531_127396779_127398675_127398797_127402545_127402683_127410388_127410602_127417637_127417813_127419119_127419241_127420043_127420208_127422669_127422773_127433362_127433510_127434686_127434822_127435360_127435490_127438438_127438568_127440738_127440868_127442997_127443127_127445456_127445694_127447556_127447685_127449098_127449223_127454565_127454611_127455400_127455608_127457127
transcript_161638.known	chr5	+	2238	15	FSM	ENSG00000145794.17	ENST00000418761.6	2238	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	28.9848658609901	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTGATTTCTAGTGTC	127289502	False	NA	NA	False	AGTAAA	-17	NA	127290846	127424604	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_127291057_127299995_127300047_127331290_127331425_127339119_127339222_127340529_127340631_127369909_127370003_127396531_127396779_127398675_127398797_127402545_127402683_127410388_127410602_127417637_127417813_127419119_127419241_127420043_127420208_127422669_127422773_127424338
transcript_161639.known	chr5	+	2365	14	FSM	ENSG00000145794.17	ENST00000508365.5	2365	14	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_13	18.0731583641166	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAATGTTTCAGCTTGGCT	127289501	True	NA	NA	False	NA	NA	NA	127290845	127424781	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_127291057_127331290_127331425_127339119_127339222_127340529_127340631_127369909_127370003_127396531_127396779_127398675_127398797_127402545_127402683_127410388_127410602_127417637_127417813_127419119_127419241_127420043_127420208_127422669_127422773_127424338
transcript_161642.known	chr5	+	4664	9	FSM	ENSG00000164244.21	ENST00000296666.13	4664	9	0	0	0	0	multi-exon	TRUE	canonical	3	367	junction_8	35.1567916624939	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTTGTATAGCGATTTT	127508299	True	NA	17	True	AATAAA	-20	NA	127517639	127555085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_127517777_127523459_127523583_127524530_127524921_127526617_127526779_127530293_127530397_127533622_127533787_127539039_127539144_127547818_127547922_127551706
transcript_161648.known	chr5	+	5504	8	FSM	ENSG00000164244.21	ENST00000442138.6	5504	8	0	0	0	0	multi-exon	FALSE	canonical	3	382	junction_7	33.6361079065643	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACAAATCTATTTACAGC	127508310	True	NA	NA	False	AAAAAG	-5	NA	127517650	127552151	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_127517777_127523459_127523583_127524530_127524921_127526617_127526779_127530293_127530397_127533622_127533787_127539039_127539144_127547818
transcript_161651.known	chr5	+	6874	27	FSM	ENSG00000064651.14	ENST00000262461.7	6874	27	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_9	3.86552812592376	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATGTCCATTCTTATAT	128083435	True	NA	23	True	AATAAA	-23	NA	128083765	128189677	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_128084711_128112813_128112934_128114211_128114288_128114585_128114682_128131066_128131207_128134164_128134276_128135699_128135809_128138596_128138725_128138823_128138909_128141829_128141982_128147621_128147730_128148753_128148878_128149996_128150099_128151240_128151397_128152705_128152806_128158052_128158165_128161659_128161801_128167760_128167868_128171666_128171747_128174540_128174667_128177104_128177153_128178566_128178690_128180882_128180995_128182854_128182942_128184365_128184502_128184788_128184857_128186495
transcript_161655.known	chr5	+	2863	10	FSM	ENSG00000113396.13	ENST00000262462.9	2863	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	4.76095228569523	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTATTTTTATGTATCC	128965163	True	NA	10	True	AATAAA	-20	NA	128965487	129033635	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_128966619_128985132_128985337_128988599_128988759_128990339_128990465_129015884_129016080_129023619_129023711_129027132_129027332_129028344_129028443_129029576_129029708_129033105
transcript_161657.known	chr5	+	1942	5	FSM	ENSG00000066583.12	ENST00000173527.6	1942	5	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_3	23.2969955144435	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTGTGATTGAAATTAT	129089852	True	NA	6	True	ATTAAA	-15	NA	129094748	129114028	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_129095076_129104955_129105076_129105184_129105389_129106945_129107063_129112854
transcript_161661.known	chr5	+	5201	23	FSM	ENSG00000145808.10	ENST00000274487.9	5201	23	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	13.6412869900095	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGAGTCTCATGTCTTCTA	129459433	True	NA	11	True	AATAAA	-18	NA	129460297	129738683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_129460483_129461101_129461758_129509076_129509243_129526283_129526457_129527747_129527832_129528519_129528678_129551863_129551908_129596558_129596665_129620617_129620759_129622197_129622349_129641858_129641961_129647764_129647896_129648797_129648971_129654305_129654434_129658616_129658738_129665498_129665580_129679763_129679922_129684119_129684274_129694719_129694856_129701387_129701593_129704238_129704392_129734931_129735110_129737066
transcript_161664.nic	chr5	+	3980	22	NIC	ENSG00000145808.10	novel	5201	23	NA	NA	-621	-1203	intron_retention	FALSE	canonical	3	32	junction_1	16.424775268794	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGATCATTATACTTAAAAC	129458855	True	NA	NA	False	AATAAA	-18	NA	129459659	129737480	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_129460483_129509076_129509243_129526283_129526457_129527747_129527832_129528519_129528678_129551863_129551908_129596558_129596665_129620617_129620759_129622197_129622349_129641858_129641961_129647764_129647896_129648797_129648971_129654305_129654434_129658616_129658738_129665498_129665580_129679763_129679922_129684119_129684274_129694719_129694856_129701387_129701593_129704238_129704392_129734931_129735110_129737066
transcript_161666.nic	chr5	+	5125	22	NIC	ENSG00000145808.10	novel	5201	23	NA	NA	-563	0	intron_retention	FALSE	canonical	3	32	junction_1	16.424775268794	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGAGTCTCATGTCTTCTA	129458913	True	NA	11	True	AATAAA	-18	NA	129459717	129738683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_129460483_129509076_129509243_129526283_129526457_129527747_129527832_129528519_129528678_129551863_129551908_129596558_129596665_129620617_129620759_129622197_129622349_129641858_129641961_129647764_129647896_129648797_129648971_129654305_129654434_129658616_129658738_129665498_129665580_129679763_129679922_129684119_129684274_129694719_129694856_129701387_129701593_129704238_129704392_129734931_129735110_129737066
transcript_161685.known	chr5	+	6219	5	FSM	ENSG00000186687.16	ENST00000379380.9	6219	5	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	12	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGAGTGATAGTATTGT	131169813	True	NA	15	True	AATAAA	-25	NA	131170943	131205428	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_131171039_131180094_131180168_131182228_131182300_131187027_131187110_131199530
transcript_161691.known	chr5	-	619	5	FSM	ENSG00000169567.13	ENST00000504202.1	619	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	131.985794690186	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTAATGATTGTTGGCA	-131133072	True	NA	NA	False	AATAAA	-45	NA	131165220	131159603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_131159612_131160655_131160885_131162361_131162478_131162571_131162677_131165059
transcript_161692.known	chr5	-	1032	5	FSM	ENSG00000169567.13	ENST00000511475.6	1032	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	2050.93349173005	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGAGTGTTGCGTTTGA	-131133201	True	NA	-6	True	AATAAA	-26	NA	131165349	131159284	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_131159612_131160655_131160885_131162361_131162478_131162571_131162677_131165094
transcript_161693.known	chr5	+	317	4	FSM	ENSG00000186687.16	ENST00000507584.1	317	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	65.3214274866134	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGGCAAAAGTCCTGGAAA	131169858	True	NA	NA	False	AATACA	-38	NA	131170988	131199653	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_131171039_131180094_131180168_131182228_131182300_131199530
transcript_161697.known	chr5	-	825	4	FSM	ENSG00000169567.13	ENST00000508495.5	825	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	2235.65923660611	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTCTGAGTGTTGCGTT	-131133153	True	NA	-9	True	AATAAA	-23	NA	131165301	131159287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_131159612_131160655_131160845_131162571_131162677_131165094
transcript_1617.known	chr1	+	2401	5	FSM	ENSG00000158109.15	ENST00000378344.7	2401	5	0	0	0	0	multi-exon	TRUE	canonical	3	254	junction_1	10.0995049383621	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGTGTCTCTTCCCTCTT	3621792	True	NA	55	True	ATTAAA	-18	NA	3625014	3630127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_3625274_3625423_3625516_3625712_3625890_3627499_3627654_3628408
transcript_161700.known	chr5	-	1070	4	FSM	ENSG00000169567.13	ENST00000508488.2	1070	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2235.93738731656	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTCTCTCTGAGTGTTG	-131133177	True	NA	-13	True	AATAAA	-19	NA	131165325	131159291	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_131159612_131162063_131162478_131162571_131162677_131165094
transcript_161703.known	chr5	-	3080	3	FSM	ENSG00000169567.13	ENST00000675372.1	3080	3	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_2	2022	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATGGTACAAATGATAGT	-131133185	True	NA	NA	False	AATAAA	-2	NA	131165333	131156910	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_131159612_131162571_131162677_131165059
transcript_161704.known	chr5	-	852	3	FSM	ENSG00000169567.13	ENST00000304043.10	852	3	0	0	0	0	multi-exon	FALSE	canonical	3	4376	junction_1	194.5	1273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACATAGGAAATTGACCA	-131133108	True	NA	NA	False	NA	NA	NA	131165256	131159026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_131159612_131162571_131162677_131165094
transcript_161705.known	chr5	-	3527	3	FSM	ENSG00000169567.13	ENST00000675491.1	3527	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	2361	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTATAGTCTCTCTGAGT	-131133186	True	NA	-17	True	AATAAA	-15	NA	131165334	131159295	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_131162478_131162571_131162677_131165094
transcript_161707.known	chr5	-	3628	2	FSM	ENSG00000169567.13	ENST00000506908.2	3628	2	0	0	0	0	multi-exon	FALSE	canonical	3	4765	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTATAGTCTCTCTGAGT	-131133193	True	NA	-17	True	AATAAA	-15	NA	131165341	131159295	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_131162677_131165094
transcript_161711.nnic	chr5	+	1661	6	NNC	ENSG00000158985.14	novel	3591	6	NA	NA	-41	-542	at_least_one_novel_splicesite	FALSE	canonical	3	145	junction_5	28.5475042692001	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAAGGCATTCATTCTGT	131261652	True	NA	1	True	AATAAA	-15	NA	131263967	131392564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_131264167_131315975_131316145_131359208_131359548_131385542_131385645_131390992_131391109_131391828
transcript_161712.nnic	chr5	+	3764	6	NNC	ENSG00000158985.14	novel	3591	6	NA	NA	-41	-5	intron_retention	FALSE	canonical	3	145	junction_5	28.5475042692001	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTTGGCCTTTCCTTT	131261652	True	NA	18	True	AATAAA	-14	NA	131263967	131394667	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_131264167_131315975_131316145_131359208_131359548_131385542_131385645_131390992_131391109_131391828
transcript_161713.known	chr5	+	3591	6	FSM	ENSG00000158985.14	ENST00000360515.7	3591	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	72.9783529548317	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTAGTTTTTCTTTT	131261759	True	NA	41	True	AATAAA	-37	NA	131264074	131394690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_131264167_131315975_131316145_131359208_131359548_131385542_131385645_131390992_131391109_131391917
transcript_16172.known	chr1	-	616	5	FSM	ENSG00000122218.16	ENST00000541366.1	616	5	0	0	0	0	multi-exon	FALSE	canonical	3	810	junction_1	62.7435255624036	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTGCAAAATAATAAATG	-160328991	True	NA	NA	False	NA	NA	NA	160343259	160333461	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_160333680_160335241_160335323_160339908_160339983_160340180_160340295_160343130
transcript_161722.known	chr5	-	8350	28	FSM	ENSG00000158987.22	ENST00000509018.6	8350	28	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_23	9.0405275590506	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTCTGTACTTAATTAT	-131632297	True	NA	-1	True	AATAAA	-14	NA	131635229	131423920	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_131427292_131428901_131429217_131430858_131431350_131433429_131433659_131439580_131439716_131442348_131442538_131446482_131446704_131453053_131453178_131455800_131456013_131461704_131462089_131464040_131464282_131472586_131472745_131479512_131479754_131489545_131489655_131492581_131492786_131495552_131495661_131498442_131498608_131504625_131504779_131505363_131505523_131508070_131508208_131510313_131510492_131521389_131521522_131548046_131548191_131561977_131562048_131592382_131592467_131603270_131603328_131604622_131604694_131634961
transcript_161726.known	chr5	-	6568	18	FSM	ENSG00000217128.13	ENST00000510461.6	6568	18	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	9.13262526827075	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATGGTGTTGGTCTTTCT	-131794920	True	NA	0	True	AATAAA	-18	NA	131797017	131641713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_131644764_131647089_131647206_131651801_131652000_131670462_131670632_131671504_131672925_131677702_131677873_131679028_131679176_131698916_131699003_131704064_131704267_131706410_131706547_131709200_131709273_131710577_131710662_131716564_131716657_131718985_131719061_131719316_131719418_131730903_131731039_131744563_131744691_131796829
transcript_161727.known	chr5	-	6535	21	FSM	ENSG00000164398.15	ENST00000651356.1	6535	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	3.52703841770968	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTTATAATTACTATTT	-132011598	True	NA	NA	False	AATAAA	-20	NA	132011658	131949972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_131954372_131959535_131959608_131960519_131960622_131962534_131962679_131966415_131966533_131967939_131968029_131970127_131970201_131971549_131971646_131972723_131972859_131973265_131973401_131974757_131974836_131976647_131976722_131985406_131985459_131986821_131986855_131988047_131988227_131988804_131988905_131989406_131989509_131990099_131990165_131990852_131990968_131994030_131994252_132011504
transcript_161732.known	chr5	-	2230	16	FSM	ENSG00000072682.20	ENST00000166534.8	2230	16	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	46.8797042083956	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTTACTTGGAGTATTT	-132226488	True	NA	0	True	AATAAA	-24	NA	132227857	132192609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_132193081_132194925_132195023_132195411_132195481_132198205_132198272_132198878_132198933_132203747_132203848_132204081_132204153_132207707_132207885_132209137_132209332_132210283_132210524_132213915_132214054_132217196_132217349_132217751_132217849_132218544_132218645_132227085_132227222_132227789
transcript_161735.known	chr5	-	2625	16	FSM	ENSG00000072682.20	ENST00000379100.7	2625	16	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_14	49.0716482978376	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGCCTTACTTGGAGTA	-132226466	True	NA	-3	True	AATAAA	-21	NA	132227835	132192612	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_132193081_132194925_132195023_132195411_132195481_132198320_132198381_132198878_132198933_132203747_132203848_132204081_132204153_132207707_132207885_132209137_132209332_132210283_132210524_132213915_132214054_132217196_132217349_132217751_132217849_132218544_132218645_132226696_132227259_132227789
transcript_161739.nic	chr5	-	2505	16	NIC	ENSG00000072682.20	novel	2223	16	NA	NA	120	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_15	35.1917919723083	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTTACTTGGAGTATTT	NA	False	NA	0	True	AATAAA	-24	NA	132228138	132192609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_132193081_132194925_132195023_132195411_132195481_132198320_132198381_132198878_132198933_132203747_132203848_132204081_132204153_132207707_132207885_132209137_132209332_132210283_132210524_132213915_132214054_132217196_132217349_132217751_132217849_132218544_132218645_132227085_132227222_132227789
transcript_161740.known	chr5	-	2223	16	FSM	ENSG00000072682.20	ENST00000379086.5	2223	16	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_15	40.1161646554935	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTTACTTGGAGTATTT	-132226450	True	NA	0	True	AATAAA	-24	NA	132227819	132192609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_132193081_132194925_132195023_132195411_132195481_132198320_132198381_132198878_132198933_132203747_132203848_132204081_132204153_132207707_132207885_132209137_132209332_132210283_132210524_132213915_132214054_132217196_132217349_132217751_132217849_132218544_132218645_132227085_132227259_132227789
transcript_161741.known	chr5	-	4553	15	FSM	ENSG00000072682.20	ENST00000379104.7	4553	15	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	46.7601893294119	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTGTCTGTTTCTTCTGT	-132226484	True	NA	0	True	ATTAAA	-16	NA	132227853	132190146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_132193081_132194925_132195023_132195411_132195481_132198205_132198272_132198878_132198933_132203747_132203848_132204081_132204153_132207707_132207885_132209137_132209332_132210283_132210524_132213915_132214054_132217196_132217349_132217751_132217849_132218544_132218645_132227789
transcript_161742.known	chr5	-	4547	15	FSM	ENSG00000072682.20	ENST00000360568.8	4547	15	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_14	33.2290289859174	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTGTCTGTTTCTTCTGT	-132226484	True	NA	0	True	ATTAAA	-16	NA	132227853	132190146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_132193081_132194925_132195023_132195411_132195481_132198320_132198381_132198878_132198933_132203747_132203848_132204081_132204153_132207707_132207885_132209137_132209332_132210283_132210524_132213915_132214054_132217196_132217349_132217751_132217849_132218544_132218645_132227789
transcript_161749.known	chr5	+	2257	7	FSM	ENSG00000131435.13	ENST00000253754.8	2257	7	0	0	0	0	multi-exon	TRUE	canonical	3	135	junction_3	19.3907194296653	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATTTCTCTGATTACC	132256217	True	NA	NA	False	AGTAAA	-23	NA	132257695	132273454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_132257828_132262608_132262761_132266463_132266546_132270914_132271094_132271302_132271467_132271790_132271909_132272024
transcript_161750.known	chr5	+	1006	6	FSM	ENSG00000131435.13	ENST00000379018.7	1006	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	67.0957524736104	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCACCTGGCCTGCCAC	132256228	True	NA	30	True	AATAAA	-22	NA	132257706	132272332	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_132257828_132262608_132262761_132266463_132266546_132270914_132271094_132271302_132271467_132272024
transcript_161752.known	chr5	+	3277	10	FSM	ENSG00000197375.14	ENST00000245407.8	3277	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	2.10818510677892	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAACTGCCTAGAATCTT	132369414	True	NA	7	True	AGTAAA	-17	NA	132369709	132395612	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_132370366_132378377_132378482_132384146_132384302_132385327_132385500_132387024_132387152_132388920_132389022_132390689_132390905_132392432_132392616_132393675_132393812_132394184
transcript_161754.known	chr5	-	733	2	FSM	ENSG00000233006.8	ENST00000457998.2	733	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATGTATGATAGAAGAAAG	-132369530	True	NA	NA	False	NA	NA	NA	132369648	132366280	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_132366782_132369416
transcript_161756.known	chr5	+	2234	10	FSM	ENSG00000197208.6	ENST00000200652.4	2234	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.628539361054709	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAGGTGACAACAATGTG	132294380	False	NA	NA	False	AATAAA	-26	NA	132294393	132344190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_132295010_132312160_132312265_132313613_132313769_132322183_132322356_132327276_132327404_132331755_132331851_132334717_132334933_132335817_132336001_132340564_132340701_132343759
transcript_161758.nnic	chr5	+	3550	20	ISM	ENSG00000113522.14	ENST00000378823.8	8272	25	-112	30293	-65	29	5prime_fragment	FALSE	canonical	3	110	junction_4	14.9028246592881	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAAAAGAAGTTGAAGAAGA	NA	False	NA	NA	False	AAAAAG	-11	NA	132556864	132616056	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_132557454_132559283_132559368_132575776_132575929_132579316_132579503_132579861_132580067_132587561_132587691_132587923_132588090_132588686_132588881_132589630_132589838_132591223_132591407_132591876_132592035_132594868_132595045_132595572_132595811_132603299_132603490_132603919_132604047_132604805_132605000_132608614_132608726_132609116_132609210_132609282_132609397_132616002
transcript_161760.nnic	chr5	+	3306	18	ISM	ENSG00000113522.14	ENST00000378823.8	8272	25	-36	37140	3	-130	5prime_fragment	FALSE	canonical	3	110	junction_4	15.3589125191736	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAATTTAAAACTTAAAATT	132551719	True	NA	NA	False	NA	NA	NA	132556940	132609209	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_132557454_132559283_132559368_132575776_132575929_132579316_132579503_132579861_132580067_132587561_132587691_132587923_132588090_132588686_132588881_132589630_132589838_132591223_132591407_132591876_132592035_132594868_132595045_132595572_132595811_132603299_132603490_132603919_132604047_132604805_132605000_132608614_132608726_132609116
transcript_161762.nnic	chr5	+	2613	14	ISM	ENSG00000113522.14	ENST00000378823.8	8272	25	-37	43029	2	-85	5prime_fragment	FALSE	canonical	3	110	junction_4	16.0170028000942	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAGAAGGAAATACCAGAAT	132551718	True	NA	4	True	NA	NA	NA	132556939	132603320	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_132557454_132559283_132559368_132575776_132575929_132579316_132579503_132579861_132580067_132587561_132587691_132587923_132588090_132588686_132588881_132589630_132589838_132591223_132591407_132591876_132592035_132594868_132595045_132595572_132595811_132603299
transcript_161763.nnic	chr5	+	2691	14	ISM	ENSG00000113522.14	ENST00000378823.8	8272	25	-26	42940	13	4	5prime_fragment	FALSE	canonical	3	110	junction_4	16.0170028000942	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCTTGGGTACAATAATG	132551729	True	NA	93	True	AATAGA	-41	NA	132556950	132603409	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_132557454_132559283_132559368_132575776_132575929_132579316_132579503_132579861_132580067_132587561_132587691_132587923_132588090_132588686_132588881_132589630_132589838_132591223_132591407_132591876_132592035_132594868_132595045_132595572_132595811_132603299
transcript_161765.nnic	chr5	+	2698	13	ISM	ENSG00000113522.14	ENST00000378823.8	8272	25	-185	50581	-138	0	5prime_fragment	TRUE	canonical	3	110	junction_4	16.1010265373223	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAGCGGCGTGATGAAA	NA	False	NA	NA	False	GATAAA	-33	NA	132556791	132595768	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_132557454_132559283_132559368_132575776_132575929_132579316_132579503_132579861_132580067_132587561_132587691_132587923_132588090_132588686_132588881_132589630_132589838_132591223_132591407_132591876_132592035_132594868_132595045_132595572
transcript_161767.nnic	chr5	+	2218	12	ISM	ENSG00000113522.14	ENST00000378823.8	8272	25	-44	51448	3	-867	5prime_fragment	FALSE	canonical	3	110	junction_4	16.6886906824417	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCATATAAATAATGAACTAA	132551711	True	NA	NA	False	AATAAA	-3	NA	132556932	132594901	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_132557454_132559283_132559368_132575776_132575929_132579316_132579503_132579861_132580067_132587561_132587691_132587923_132588090_132588686_132588881_132589630_132589838_132591223_132591407_132591876_132592035_132594868
transcript_161768.nnic	chr5	+	1649	8	ISM	ENSG00000113522.14	ENST00000453394.5	2076	12	-343	6921	-42	40	5prime_fragment	FALSE	canonical	3	110	junction_4	17.01020102102	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGGGAAGCAAAAACTGC	132556852	True	NA	NA	False	ATTAAA	-31	NA	132556887	132588847	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_132557454_132559283_132559368_132575776_132575929_132579316_132579503_132579861_132580067_132587561_132587691_132587923_132588090_132588686
transcript_161770.nnic	chr5	+	1228	6	ISM	ENSG00000113522.14	ENST00000453394.5	2076	12	-298	8127	3	-1166	5prime_fragment	FALSE	canonical	3	110	junction_4	19.7139544485626	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGCAAATGGAGAAAGATA	132551711	True	NA	NA	False	ATTAAA	-18	NA	132556932	132587641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_132557454_132559283_132559368_132575776_132575929_132579316_132579503_132579861_132580067_132587561
transcript_161772.nnic	chr5	-	2230	11	NNC	ENSG00000125347.15	novel	2061	10	NA	NA	-5737	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	6.31585306985525	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGGGTGTGGCCTTTTTA	NA	False	NA	-25	True	AGTAAA	-8	NA	132514456	132483085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_132484076_132484361_132484498_132485666_132485717_132486250_132486374_132486556_132486687_132486794_132486845_132486953_132487131_132487925_132488026_132489391_132489484_132508689_132508840_132514224
transcript_161777.known	chr5	+	942	4	FSM	ENSG00000197536.11	ENST00000378953.8	942	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4.10960933531265	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCTATCTCCAGTACTG	132410620	False	NA	NA	False	AATAAA	-21	NA	132410635	132476044	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_132411042_132419822_132419941_132449649_132449690_132475666
transcript_161779.nic	chr5	+	3252	17	ISM	ENSG00000113522.14	ENST00000378823.8	8272	25	-103	37652	-56	51	5prime_fragment	FALSE	canonical	3	110	junction_4	15.6782841455945	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAAGCAACAAAATAGCAC	NA	False	NA	NA	False	AAAAAG	-23	NA	132556873	132608697	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_132557454_132559283_132559368_132575776_132575929_132579316_132579503_132579861_132580067_132587561_132587691_132587923_132588090_132588686_132588881_132589630_132589838_132591223_132591407_132591876_132592035_132594868_132595045_132595572_132595811_132603299_132603490_132603919_132604047_132604805_132605000_132608614
transcript_16178.known	chr1	+	2822	17	FSM	ENSG00000162736.17	ENST00000294785.10	2822	17	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_14	28.2486172227952	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACTTGTACTGCTAGTTAT	160338889	True	NA	13	True	ATTAAA	-16	NA	160343382	160358949	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_160343482_160344721_160344827_160348998_160349123_160349548_160349671_160350104_160350251_160351221_160351373_160351695_160351806_160352053_160352207_160352886_160352992_160353159_160353238_160354117_160354291_160355654_160355758_160355862_160355959_160356259_160356348_160356599_160356755_160357040_160357254_160358148
transcript_161783.nic	chr5	+	2112	11	ISM	ENSG00000113522.14	ENST00000652016.1	3134	18	-22	16661	19	0	5prime_fragment	FALSE	canonical	3	110	junction_4	17.4988571055369	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAATCAAAAGAAATTAAT	132551735	True	NA	NA	False	AAAACA	-21	NA	132556956	132591985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_132557454_132559283_132559368_132575776_132575929_132579316_132579503_132579861_132580067_132587561_132587691_132587923_132588090_132588686_132588881_132589630_132589838_132591223_132591407_132591876
transcript_161787.nic	chr5	+	1048	5	ISM	ENSG00000113522.14	ENST00000453394.5	2076	12	-357	15861	-56	0	5prime_fragment	FALSE	canonical	3	110	junction_4	21.099466817908	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGTCAGAAAGTAAAAGAATA	NA	False	NA	NA	False	ATTAAA	-37	NA	132556873	132579907	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_132557454_132559283_132559368_132575776_132575929_132579316_132579503_132579861
transcript_161790.known	chr5	-	6325	17	FSM	ENSG00000131437.16	ENST00000378746.8	6325	17	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	9.7459927662604	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTAGTAGTGGTCTGCTGC	NA	False	NA	-4	True	AATAAA	-18	NA	132737638	132692627	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_132696683_132699170_132699296_132700215_132700285_132700646_132700701_132702086_132702213_132702557_132702669_132702884_132703066_132703462_132703620_132710958_132711058_132715756_132715932_132716244_132716443_132716844_132716985_132720608_132720715_132726127_132726213_132726353_132726499_132734204_132734479_132737413
transcript_161804.nic	chr5	-	4358	10	NIC	ENSG00000164402.14	novel	4394	10	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	61.7521929435169	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTGTGGTGTCTTTTT	-132775556	True	NA	-4	True	ATTAAA	-17	NA	132777395	132756004	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_132758825_132760801_132760993_132761132_132761266_132761457_132761627_132761799_132761897_132762483_132762646_132763705_132763887_132764223_132764420_132765408_132765530_132777107
transcript_161806.known	chr5	-	4394	10	FSM	ENSG00000164402.14	ENST00000296873.11	4394	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	61.7521929435169	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGGTGTCTTTTTTGGG	-132777397	False	NA	0	True	ATTAAA	-21	NA	132777421	132756000	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_132758825_132760801_132760993_132761132_132761266_132761457_132761627_132761799_132761897_132762483_132762646_132763705_132763893_132764223_132764420_132765408_132765530_132777107
transcript_161808.nic	chr5	-	2240	10	NIC	ENSG00000164402.14	novel	4394	10	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	61.7521929435169	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGGCATTTCTTTATG	-132777391	False	NA	-3	True	AATAAA	-16	NA	132777415	132758142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_132758825_132760801_132760993_132761132_132761266_132761457_132761627_132761799_132761897_132762483_132762646_132763705_132763887_132764223_132764420_132765408_132765530_132777107
transcript_161821.nic	chr5	-	3333	8	NIC	ENSG00000164403.15	novel	3768	10	NA	NA	-222	-32	intron_retention	FALSE	canonical	2	7	junction_7	6.98394660661732	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTTCTCCAAAGTGTTC	-132830868	False	NA	NA	False	NA	NA	NA	132830881	132822351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_132823129_132823249_132823523_132823622_132823765_132823849_132824420_132824614_132824822_132825017_132825074_132825162_132826183_132830593
transcript_161824.known	chr5	-	351	1	FSM	ENSG00000164403.15	ENST00000606676.1	351	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCAGTCTGAGCCTTCTG	-132825269	False	NA	NA	False	AATGAA	-16	NA	132825282	132824931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_132824900_132825300
transcript_161825.known	chr5	+	1573	3	FSM	ENSG00000164405.11	ENST00000378670.8	1573	3	0	0	0	0	multi-exon	FALSE	canonical	3	4175	junction_1	721	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTAAATTATCTTTTTG	132851262	True	NA	NA	False	AATAAA	-19	NA	132866641	132868847	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_132866688_132866868_132867036_132867487
transcript_161826.known	chr5	+	509	2	FSM	ENSG00000164405.11	ENST00000480372.1	509	2	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAGTGATGATAGTTGCA	132851277	True	NA	NA	False	NA	NA	NA	132866656	132867342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_132866692_132866868
transcript_161827.known	chr5	+	258	2	FSM	ENSG00000164405.11	ENST00000496429.1	258	2	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTTTTGTGAGTAGAAT	132851262	True	NA	24	True	AATAAA	-29	NA	132866641	132867699	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_132866688_132867487
transcript_161829.known	chr5	+	586	2	FSM	ENSG00000164405.11	ENST00000378665.1	586	2	0	0	0	0	multi-exon	FALSE	canonical	3	5617	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACTGTTGTGATATTACA	132851266	True	NA	8	True	AATAAA	-13	NA	132866645	132867683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_132867036_132867487
transcript_161833.known	chr5	+	935	2	FSM	ENSG00000164406.8	ENST00000483190.1	935	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAGCAGTCTGGAATTCA	132873419	False	NA	NA	False	ATTAAA	-16	NA	132873443	132874698	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_132874090_132874409
transcript_161835.known	chr5	-	3348	13	FSM	ENSG00000072364.13	ENST00000378595.7	3348	13	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	4.52769256906871	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGATA	-132957502	True	NA	NA	False	TTTAAA	-5	NA	132963618	132891816	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_132892405_132893029_132893119_132896322_132897241_132898229_132898393_132899103_132899142_132899586_132899642_132902441_132902488_132904367_132904405_132927120_132927208_132932177_132932223_132934146_132934942_132937066_132937194_132963258
transcript_161839.known	chr5	-	2160	5	FSM	ENSG00000155329.12	ENST00000355372.6	2160	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	118.103767933119	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGCTTAAACTTCTGTTA	-133021682	True	NA	-15	True	AATAAA	-18	NA	133026549	132996995	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_132998833_133000131_133000174_133006758_133006921_133022840_133022907_133026496
transcript_161840.known	chr5	-	794	5	FSM	ENSG00000155329.12	ENST00000513541.5	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	115.354616292544	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACTTTTATTTGAAGGGT	-133021682	True	NA	NA	False	NA	NA	NA	133026549	132998407	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_132998851_133000131_133000202_133006758_133006921_133022840_133022907_133026496
transcript_161846.known	chr5	-	2178	4	FSM	ENSG00000155329.12	ENST00000324170.7	2178	4	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_3	23.3285709425636	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTATCTCTTTAGTG	-133021737	True	NA	-4	True	AATAAA	-29	NA	133026604	132996984	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_132998851_133000131_133000174_133006758_133006921_133026496
transcript_161847.known	chr5	-	608	4	FSM	ENSG00000155329.12	ENST00000509008.1	608	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	121.444088644391	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGAATTTAGAATATGTTA	-133021682	True	NA	NA	False	AAAACA	-18	NA	133026549	132998527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_132998851_133000131_133000202_133006758_133006921_133026496
transcript_161854.known	chr5	-	876	3	FSM	ENSG00000155329.12	ENST00000513848.5	876	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	139.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGATTTCTAATGCTTTT	-133021704	True	NA	-123	True	NA	NA	NA	133026571	132998211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_132998851_133006758_133006921_133026496
transcript_161856.known	chr5	-	325	3	FSM	ENSG00000155329.12	ENST00000504170.2	325	3	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	37	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTCTGGTGGATATTTT	-133021722	True	NA	NA	False	AATAAA	-13	NA	133026589	133019037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_133019204_133022840_133022907_133026496
transcript_161857.known	chr5	-	829	1	FSM	ENSG00000286408.1	ENST00000665702.1	829	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGATTTGTCGTTT	-133051778	True	NA	0	True	NA	NA	NA	133051893	133051064	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_133051100_133051900
transcript_161859.nic	chr5	+	2502	20	NNC	ENSG00000170606.16	novel	4774	19	NA	NA	-65	-569	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_14	513.094786942736	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAGCACAAATGAAG	133020026	True	NA	7	True	NA	NA	NA	133051947	133103908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_133052358_133064979_133065038_133067416_133067558_133070373_133070497_133073229_133073330_133073992_133074127_133076653_133076899_133086781_133086859_133088403_133088556_133089054_133089162_133089561_133089696_133091192_133091375_133092699_133092790_133096097_133096205_133096205_133096251_133097160_133097287_133099544_133099653_133101758_133101810_133101810_133101879_133103864
transcript_161860.known	chr5	+	4774	19	FSM	ENSG00000170606.16	ENST00000304858.7	4774	19	0	0	0	0	multi-exon	FALSE	canonical	3	1376	junction_6	150.270589271487	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTTCCTTAATTCCATAA	133020091	True	NA	16	True	AATAAA	-23	NA	133052012	133106449	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_133052358_133064979_133065038_133067416_133067558_133070373_133070497_133073229_133073330_133073992_133074127_133076653_133076899_133086781_133086859_133088403_133088556_133089054_133089162_133089561_133089696_133091192_133091375_133092699_133092790_133096097_133096251_133097160_133097287_133099544_133099653_133101758_133101879_133103864_133104027_133104232
transcript_161887.known	chr5	-	5396	16	FSM	ENSG00000053108.17	ENST00000265342.12	5396	16	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_10	2.74388208363422	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGATAGTTTTTTTTTTCC	-133612435	True	NA	NA	False	AATAAA	-17	NA	133612541	133196454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_133199798_133201932_133202043_133210190_133210299_133217228_133217379_133220747_133220867_133224189_133224217_133225149_133225285_133225657_133225820_133233416_133233538_133249409_133249577_133312653_133312778_133316458_133316653_133400737_133400987_133567185_133567220_133603857_133603994_133612324
transcript_161895.known	chr5	-	2188	3	FSM	ENSG00000113583.8	ENST00000231512.5	2188	3	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_2	18	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCACGAGTGTGTTTC	-133960226	True	NA	-9	True	AATAAA	-20	NA	133968625	133955509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_133956991_133959493_133960021_133968445
transcript_1619.known	chr1	+	5192	14	FSM	ENSG00000078900.15	ENST00000378295.9	5192	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	7.02067951329516	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGTTCTCATGACTCAACC	3652489	False	NA	6	True	AATAAA	-17	NA	3652515	3736201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_3652642_3682332_3682431_3683059_3683181_3707548_3707792_3722020_3722208_3723353_3723470_3727114_3727225_3727627_3727771_3728128_3728218_3729326_3729449_3729999_3730149_3730926_3731066_3731462_3731557_3732746
transcript_161904.known	chr5	-	1807	9	FSM	ENSG00000213585.11	ENST00000395044.7	1807	9	0	0	0	0	multi-exon	FALSE	canonical	3	663	junction_8	482.883008605604	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCTTCTGTTGTCTTTA	-133969308	True	NA	-6	True	AATAAA	-15	NA	134004742	133971914	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_133972863_133973790_133973849_133975870_133976022_133980728_133980957_133990854_133990908_133991001_133991155_133992305_133992356_133992945_133993016_134004646
transcript_161905.known	chr5	-	1873	9	FSM	ENSG00000213585.11	ENST00000395047.6	1873	9	0	0	0	0	multi-exon	FALSE	canonical	3	1471	junction_8	247.331761001292	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACACTTAAAAAACTTGAAT	-134004829	False	NA	-43	True	NA	NA	NA	134004842	133971951	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_133972863_133973790_133973849_133975870_133976022_133980728_133980957_133990854_133990908_133991001_133991155_133992305_133992356_133992945_133993019_134004646
transcript_161906.known	chr5	-	1839	9	FSM	ENSG00000213585.11	ENST00000265333.8	1839	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_8	683.237593648798	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTTTAGATTTATTTT	-134004962	False	NA	-15	True	AATAAA	-17	NA	134004975	133971870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_133972863_133973790_133973849_133975870_133976022_133980728_133980957_133990854_133990908_133991001_133991155_133992305_133992356_133992945_133993019_134004894
transcript_16191.nic	chr1	+	3124	16	NIC	ENSG00000162736.17	novel	2822	17	NA	NA	14	0	intron_retention	FALSE	canonical	3	303	junction_14	29.0169299241361	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACTTGTACTGCTAGTTAT	160338873	True	NA	13	True	ATTAAA	-16	NA	160343366	160358949	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_160343482_160344721_160344827_160348998_160349123_160349548_160349671_160350104_160350251_160351221_160351373_160351695_160351806_160352053_160352207_160352886_160352992_160353159_160353238_160354117_160354291_160355654_160355758_160355862_160355959_160356259_160356348_160356599_160357254_160358148
transcript_161931.known	chr5	+	3330	11	FSM	ENSG00000081059.20	ENST00000395029.5	3330	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_10	13.2170344631464	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTTTCAAAGCCTGAC	134113784	True	NA	4	True	AATAAA	-17	NA	134114711	134148210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134115156_134115320_134115388_134115908_134116034_134138058_134138165_134138950_134139039_134142184_134142305_134142720_134142884_134142992_134143101_134143591_134143641_134144796_134144870_134146223
transcript_161932.known	chr5	+	3288	10	FSM	ENSG00000081059.20	ENST00000342854.10	3288	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_9	11.7389296418286	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTTTCAAAGCCTGAC	134113753	True	NA	4	True	AATAAA	-17	NA	134114680	134148210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134115156_134115320_134115388_134115908_134116034_134138058_134138165_134138950_134139039_134142184_134142305_134142720_134142884_134142992_134143101_134143591_134143641_134146223
transcript_161936.known	chr5	-	802	7	FSM	ENSG00000113558.19	ENST00000522855.5	802	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	3101.07886692501	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCCAAACCTTACGGCCA	-134123014	True	NA	-54	True	NA	NA	NA	134176950	134157571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_134157769_134158454_134158596_134160986_134161131_134167169_134167244_134173925_134174023_134174461_134174515_134176854
transcript_161940.known	chr5	-	4582	7	FSM	ENSG00000113575.10	ENST00000481195.6	4582	7	0	0	0	0	multi-exon	FALSE	canonical	3	1561	junction_1	75.6791472820177	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTTTTGACATATTTCT	-134205563	True	NA	-16	True	ATTAAA	-16	NA	134226073	134194331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_134197845_134199085_134199205_134200334_134200497_134200984_134201075_134201847_134202022_134205921_134206132_134225759
transcript_161946.known	chr5	-	9386	6	FSM	ENSG00000113558.19	ENST00000353411.11	9386	6	0	0	0	0	multi-exon	FALSE	canonical	3	6347	junction_2	204.604594278819	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAACTTTTTAAAAAGTGG	-134123014	True	NA	-11	True	AATAAA	-37	NA	134176950	134148934	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_134157769_134158454_134158596_134160986_134161131_134167169_134167244_134173925_134174023_134176854
transcript_161958.known	chr5	-	1683	5	FSM	ENSG00000113558.19	ENST00000522552.5	1683	5	0	0	0	0	multi-exon	FALSE	canonical	3	6347	junction_1	212.073542668575	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATCTTTATTCATGAGT	-134123028	True	NA	95	True	AATAAA	-41	NA	134176964	134157337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_134158596_134160986_134161131_134167169_134167244_134173925_134174023_134176854
transcript_161962.known	chr5	-	899	6	FSM	ENSG00000113558.19	ENST00000521216.5	899	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2696.44991794767	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCATTGTAAATAAAACAACT	-134122984	True	NA	41	True	TTTAAA	-6	NA	134176920	134157391	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_134157769_134158454_134158629_134161019_134161131_134167169_134167244_134173925_134174023_134176854
transcript_161963.known	chr5	-	572	6	FSM	ENSG00000113558.19	ENST00000328392.10	572	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	2651.29409911462	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAGGCAAAGAAAGGAAAT	-134123014	True	NA	NA	False	AATAAA	-7	NA	134176950	134157940	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_134157961_134158454_134158596_134160986_134161131_134167169_134167244_134173925_134174023_134176854
transcript_161966.known	chr5	-	586	3	FSM	ENSG00000006837.12	ENST00000521755.1	586	3	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGAGTGTTTCTTATG	-134370783	True	NA	0	True	ATTAAA	-17	NA	134371004	134308000	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_134308467_134321790_134321904_134370997
transcript_161967.known	chr5	+	2241	6	FSM	ENSG00000119048.8	ENST00000265339.7	2241	6	0	0	0	0	multi-exon	TRUE	canonical	3	204	junction_1	9.04654630231891	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAACTATAGACATTCA	134369552	True	NA	NA	False	AAAAAG	-39	NA	134371568	134392108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134371640_134374382_134374464_134376668_134376695_134380718_134380809_134388324_134388414_134390224
transcript_161973.known	chr5	+	644	6	FSM	ENSG00000119048.8	ENST00000507277.1	644	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	86.9551608589162	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTTGTATTTTTTTCC	134369587	False	NA	5	True	CATAAA	-12	NA	134371603	134390573	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134371640_134374382_134374464_134376668_134376695_134380718_134380809_134388351_134388414_134390224
transcript_161974.nnic	chr5	-	791	4	NNC	ENSG00000237190.4	novel	1228	3	NA	NA	-66	-22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	403.017231503678	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTTTTGTTGTTGATGT	-134395225	False	NA	-81	True	AATAAA	-16	NA	134411947	134402086	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_134402130_134402610_134402927_134409902_134410003_134411615
transcript_161975.known	chr5	-	1228	3	FSM	ENSG00000237190.4	ENST00000458198.3	1228	3	0	0	0	0	multi-exon	FALSE	canonical	3	831	junction_1	23	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGGCAGGTAATTAATTT	-134395159	True	NA	-59	True	AATAAA	-38	NA	134411881	134402064	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_134402927_134409902_134410003_134411615
transcript_161977.known	chr5	-	800	2	FSM	ENSG00000237190.4	ENST00000395009.3	800	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGTATCTGAGAATATCT	-134395159	True	NA	-11	True	AATAAA	-17	NA	134411881	134410548	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_134411083_134411615
transcript_161979.nnic	chr5	+	3870	2	NNC	ENSG00000250994.2	novel	714	2	NA	NA	-8744	1538	at_least_one_novel_splicesite	TRUE	canonical	3	31	junction_1	0	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAATAACATGTAATGGGT	134427437	True	NA	5	True	TTTAAA	-11	NA	134427966	134439735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_134428470_134436368
transcript_161981.nnic	chr5	+	4264	2	NNC	ENSG00000250994.2	novel	714	2	NA	NA	-8744	1932	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	0	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCCAAACAACTATACATAC	134427437	True	NA	NA	False	AAAAAG	-23	NA	134427966	134440129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_134428470_134436368
transcript_161982.known	chr5	+	1107	2	FSM	ENSG00000251169.2	ENST00000515627.2	1107	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGGGATGTGCCATCTA	NA	False	NA	NA	False	AATAAA	-31	NA	134506551	134509229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134506835_134508405
transcript_161985.nic	chr5	+	3034	12	NIC	ENSG00000043143.22	novel	2802	11	NA	NA	-254	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	24.1753238032448	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTGTTGTCTTTCCTCTG	134524003	True	NA	41	True	AATATA	-19	NA	134524057	134579474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_134524430_134535857_134535916_134537988_134538084_134552051_134552210_134559829_134559991_134560745_134560958_134562199_134562368_134564493_134564611_134566115_134566581_134573644_134573763_134576767_134576897_134578493
transcript_161990.known	chr5	+	6757	12	FSM	ENSG00000043143.22	ENST00000681547.2	6757	12	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_11	14.8863462872904	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGGTGTGAGGCTCCA	134524383	True	NA	4	True	AATAAA	-16	NA	134525669	134583227	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134526012_134535857_134535916_134537988_134538084_134552051_134552210_134559829_134559991_134560745_134560958_134562199_134562368_134564493_134564611_134566115_134566581_134573644_134573763_134576767_134576897_134578493
transcript_161993.known	chr5	+	2570	12	FSM	ENSG00000043143.22	ENST00000612830.2	2570	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	25.1142842368098	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCACCCCCTTCCCTGTCCC	134526190	False	NA	NA	False	NA	NA	NA	134526218	134579317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134526287_134535857_134535916_134537988_134538084_134552051_134552210_134559829_134559991_134560745_134560958_134562199_134562368_134564493_134564611_134566115_134566581_134573644_134573763_134576767_134576897_134578496
transcript_161994.nic	chr5	+	3050	12	NIC	ENSG00000043143.22	novel	2802	11	NA	NA	121	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	24.6372022668401	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTGTTGTCTTTCCTCTG	134526342	False	NA	41	True	AATATA	-19	NA	134526370	134579474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_134526759_134535857_134535916_134537988_134538084_134552051_134552210_134559829_134559991_134560745_134560958_134562199_134562368_134564493_134564611_134566115_134566581_134573644_134573763_134576767_134576897_134578493
transcript_161998.known	chr5	+	3212	11	FSM	ENSG00000043143.22	ENST00000361895.6	3212	11	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_10	21.0734430029836	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCACTGTCACAAGCACAAC	134524386	True	NA	NA	False	AATAAA	-21	NA	134525672	134579814	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134526012_134535857_134535916_134537988_134538084_134552051_134552210_134559829_134559991_134560745_134560958_134562199_134562368_134564493_134564611_134566115_134566581_134573644_134573763_134578493
transcript_161999.nic	chr5	+	3278	11	NIC	ENSG00000043143.22	novel	3212	11	NA	NA	-394	-1	combination_of_known_junctions	FALSE	canonical	2	11	junction_10	22.1054291973714	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACACTGTTGTCTTTCCTCT	134525079	True	NA	40	True	AATATA	-18	NA	134525262	134579473	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_134526012_134535857_134535916_134537988_134538084_134552051_134552210_134559829_134559991_134560745_134560958_134562199_134562368_134564493_134564611_134566115_134566581_134573644_134573763_134578496
transcript_162002.known	chr5	+	6465	11	FSM	ENSG00000043143.22	ENST00000395003.5	6465	11	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	28.4506590433333	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGTGAGGCTCCATTG	134526079	False	NA	7	True	AATAAA	-19	NA	134526107	134583230	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134526287_134535857_134535916_134537988_134538084_134552051_134552210_134559829_134559991_134560745_134560958_134562199_134562368_134564493_134564611_134566115_134566581_134573644_134573763_134578496
transcript_162012.known	chr5	+	6389	23	FSM	ENSG00000113615.13	ENST00000398844.7	6389	23	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_8	21.8579656225602	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATAGTGACTAGTTATTT	134645161	True	NA	14	True	AATAAA	-20	NA	134648784	134727909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134649174_134661118_134661587_134666822_134666997_134671808_134671887_134674614_134674776_134675044_134675218_134676022_134676126_134679601_134679729_134682372_134682483_134686789_134686903_134688180_134688300_134692601_134692658_134693726_134693934_134697125_134697247_134697898_134698058_134703758_134703933_134705326_134705438_134708712_134708889_134715023_134715162_134718068_134718174_134720997_134721091_134723566_134723671_134724979
transcript_162018.known	chr5	+	2700	13	FSM	ENSG00000113615.13	ENST00000322887.8	2700	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_12	37.8303963617735	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGAGTTTTCTTGCTTTGT	134645200	True	NA	6	True	AATAAA	-16	NA	134648823	134693698	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134649174_134661118_134661587_134666822_134666997_134671808_134671887_134674614_134674776_134675044_134675218_134676022_134676126_134679601_134679729_134682372_134682483_134686789_134686903_134688180_134688300_134692601_134692658_134693030
transcript_162019.known	chr5	-	929	8	FSM	ENSG00000152700.14	ENST00000439578.5	929	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	118.187329684527	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAATTGAAAACTGATTC	-134630010	True	NA	NA	False	ATTAAA	-16	NA	134632774	134606801	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_134607067_134608371_134608504_134609570_134609675_134612690_134612757_134620932_134621053_134623961_134624038_134632076_134632196_134632727
transcript_162021.known	chr5	-	6517	7	FSM	ENSG00000152700.14	ENST00000402673.7	6517	7	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_5	31.4572019664107	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTAGTGTCAAGTTCCATT	-134630064	True	NA	-1	True	AATAAA	-23	NA	134632828	134601148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_134607067_134608371_134608504_134609570_134609675_134612690_134612757_134620932_134621053_134623961_134624038_134632727
transcript_162023.known	chr5	-	506	5	FSM	ENSG00000152700.14	ENST00000509730.5	506	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	118.804461195698	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGCTTCCGCTGGATGG	NA	False	NA	NA	False	NA	NA	NA	134613137	134606986	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_134607067_134608371_134608504_134609570_134609675_134612690_134612757_134613013
transcript_162025.known	chr5	+	2171	4	FSM	ENSG00000164615.6	ENST00000297156.4	2171	4	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_3	7.78888096369861	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTCTTTAAGTCTTGATT	134734107	True	NA	NA	False	ATTAAA	-23	NA	134738547	134752157	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134738793_134741062_134741524_134743986_134744053_134750758
transcript_162028.nnic	chr5	+	1386	3	NIC	ENSG00000164615.6	novel	2171	4	NA	NA	4	14	combination_of_known_splicesites	FALSE	canonical	3	27	junction_2	87	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGCACATTGTAACTTTT	134734060	True	NA	29	True	AATAAA	-30	NA	134738500	134751391	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_134738793_134741062_134741524_134750758
transcript_162029.known	chr5	+	895	3	FSM	ENSG00000164615.6	ENST00000514518.1	895	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	85	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTAATGTTAACTCTGC	134734142	True	NA	15	True	AATAAA	-16	NA	134738582	134751377	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134738793_134743986_134744053_134750758
transcript_162031.known	chr5	+	3614	2	FSM	ENSG00000164615.6	ENST00000678434.1	3614	2	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGTAATTCCAGCTACTC	134734072	True	NA	NA	False	AATACA	-27	NA	134738512	134744396	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134738793_134741062
transcript_162032.known	chr5	+	1470	2	FSM	ENSG00000164615.6	ENST00000676829.1	1470	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTACAGGCGTGAGCCAC	134734074	True	NA	NA	False	NA	NA	NA	134738514	134751950	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134738793_134750758
transcript_162034.known	chr5	+	3821	23	FSM	ENSG00000145833.16	ENST00000354283.8	3821	23	0	0	0	0	multi-exon	FALSE	canonical	2	223	junction_19	110.337620492141	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGATTTTTTTGCATTTC	134738040	True	NA	13	True	AGTAAA	-13	NA	134758803	134829296	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134758956_134763903_134764093_134766916_134767061_134770902_134771000_134773695_134773862_134777573_134777726_134781132_134781247_134781920_134782087_134782944_134783066_134784365_134784542_134785464_134785587_134788512_134788592_134790469_134790553_134794849_134795015_134795987_134796151_134807747_134807942_134811220_134811359_134811695_134811846_134816429_134816604_134817495_134817715_134818859_134819005_134826946_134827021_134828658
transcript_162040.nic	chr5	+	804	6	ISM	ENSG00000145833.16	ENST00000354283.8	3821	23	-25	51692	0	-290	5prime_fragment	FALSE	canonical	3	501	junction_4	55.1144264235781	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGGGAAATGAAATGGAGG	134738015	True	NA	26	True	NA	NA	NA	134758778	134777604	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_134758956_134763903_134764093_134766916_134767061_134770902_134771000_134773695_134773862_134777573
transcript_162041.nic	chr5	+	884	6	ISM	ENSG00000145833.16	ENST00000354283.8	3821	23	-26	51613	-1	-211	5prime_fragment	FALSE	canonical	3	501	junction_4	55.1144264235781	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAACATGAGAAGTGTAAA	134738014	True	NA	105	True	AGTAAA	-5	NA	134758777	134777683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_134758956_134763903_134764093_134766916_134767061_134770902_134771000_134773695_134773862_134777573
transcript_162042.nic	chr5	+	741	5	ISM	ENSG00000145833.16	ENST00000354283.8	3821	23	-110	55552	-77	-4150	5prime_fragment	FALSE	canonical	3	501	junction_4	59.7426773755579	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGTAGAAAAATGGCGAGAA	NA	False	NA	12	True	AAGAAA	-19	NA	134758693	134773744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_134758956_134763903_134764093_134766916_134767061_134770902_134771000_134773695
transcript_162043.nic	chr5	+	805	5	ISM	ENSG00000145833.16	ENST00000354283.8	3821	23	-110	55488	-77	-4086	5prime_fragment	FALSE	canonical	3	501	junction_4	59.7426773755579	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATCGAAGAGATGAAAC	NA	False	NA	19	True	AAAAAG	-30	NA	134758693	134773808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_134758956_134763903_134764093_134766916_134767061_134770902_134771000_134773695
transcript_162044.nic	chr5	+	545	4	ISM	ENSG00000145833.16	ENST00000354283.8	3821	23	-25	58359	0	-6957	5prime_fragment	FALSE	canonical	3	518	junction_1	58.116740751315	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTTCTAAAGAGAAGAAAAAA	134738015	True	NA	20	True	NA	NA	NA	134758778	134770937	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_134758956_134763903_134764093_134766916_134767061_134770902
transcript_162045.nic	chr5	+	606	4	ISM	ENSG00000145833.16	ENST00000354283.8	3821	23	-33	58306	0	-6904	5prime_fragment	FALSE	canonical	3	518	junction_1	58.116740751315	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTGGCGTATGTTTATT	134738007	True	NA	22	True	AAAAAG	-33	NA	134758770	134770990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_134758956_134763903_134764093_134766916_134767061_134770902
transcript_162046.nic	chr5	+	585	3	ISM	ENSG00000145833.16	ENST00000354283.8	3821	23	-110	62246	-77	-10844	5prime_fragment	FALSE	canonical	3	518	junction_1	68.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGAATAGGTAATGTTAT	NA	False	NA	NA	False	AATAAA	-11	NA	134758693	134767050	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_134758956_134763903_134764093_134766916
transcript_162048.known	chr5	+	2923	3	FSM	ENSG00000181904.9	ENST00000504727.1	2923	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	25	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCTATGTTTACTATGTT	134843519	False	NA	16	True	AATAAA	-16	NA	134846095	134859732	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134846213_134854897_134855328_134857356
transcript_162051.known	chr5	+	5083	2	FSM	ENSG00000181904.9	ENST00000394976.4	5083	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGTTTACTATGTTTTT	134843391	True	NA	19	True	AATAAA	-19	NA	134845967	134859735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134846213_134854897
transcript_162056.known	chr5	+	5674	23	FSM	ENSG00000145833.16	ENST00000452510.7	5674	23	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_19	145.974779888981	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCACTTTCTTAAAATTA	134738015	True	NA	8	True	AATAAA	-17	NA	134758778	134831121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134758956_134763903_134764093_134766916_134767061_134770902_134771000_134773695_134773862_134777573_134777726_134781132_134781247_134781920_134782087_134782944_134783066_134784365_134784542_134785464_134785587_134788512_134788592_134790469_134790553_134794849_134795015_134795987_134796151_134807747_134807942_134811220_134811359_134811695_134811846_134816429_134816607_134817495_134817715_134818859_134819005_134826946_134827021_134828658
transcript_162063.known	chr5	+	3090	5	FSM	ENSG00000113621.15	ENST00000358387.9	3090	5	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	15.7062885494951	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCACGCCTGTAATCCCAG	134871138	True	NA	6	True	AATAAA	-17	NA	134874370	134901635	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134874531_134887694_134888183_134893491_134893656_134896293_134896425_134899488
transcript_162068.known	chr5	+	2365	4	FSM	ENSG00000132570.15	ENST00000254908.11	2365	4	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	10.6144555520604	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGCTATCTTGGTGTGT	134903401	True	NA	13	True	ATTAAA	-17	NA	134905130	134962644	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134905224_134910334_134910467_134959039_134959121_134960585
transcript_162071.known	chr5	+	457	1	FSM	ENSG00000279799.1	ENST00000623591.1	457	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGACTTTTCTTTCCTTT	134903505	False	NA	8	True	AATAAA	-19	NA	134905234	134905691	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_134905200_134905700
transcript_162074.known	chr5	-	843	2	FSM	ENSG00000249082.2	ENST00000507035.2	843	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTGTTGACGCAGGGT	NA	False	NA	NA	False	AATAAA	-25	NA	135040047	135038830	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_135039222_135039595
transcript_162079.known	chr5	-	1859	9	FSM	ENSG00000113648.17	ENST00000312469.8	1859	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	305.193381317485	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGATTTAGTAAAATGT	-135389281	True	NA	9	True	NA	NA	NA	135399211	135334409	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_135335142_135343259_135343435_135345967_135346058_135350822_135350914_135360496_135360608_135369405_135369604_135370035_135370143_135388921_135389127_135399061
transcript_162080.known	chr5	-	2789	9	FSM	ENSG00000113648.17	ENST00000511689.6	1917	9	-391	-481	262	481	multi-exon	FALSE	canonical	3	288	junction_5	144.790365701589	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGTGCGTGGAGCTTTC	-135399578	False	NA	NA	False	NA	NA	NA	135399622	135333899	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_135335142_135343259_135343435_135345967_135346058_135352945_135353046_135360496_135360608_135369405_135369604_135370035_135370143_135388921_135389127_135399061
transcript_162081.known	chr5	-	1881	9	FSM	ENSG00000113648.17	ENST00000304332.8	1881	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	232.810947981404	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTGACTGGTGTGTTC	-135399843	True	NA	-9	True	AGTAAA	-12	NA	135399887	135334382	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_135335142_135343259_135343435_135345967_135346058_135352945_135353046_135360496_135360605_135369405_135369604_135370035_135370143_135388921_135389127_135399748
transcript_162090.known	chr5	-	1772	8	FSM	ENSG00000113648.17	ENST00000360597.8	1772	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	265.717818716912	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTGAGTTGATTTAGT	-135389292	True	NA	2	True	NA	NA	NA	135399222	135334416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_135335142_135343259_135343435_135345967_135346058_135360496_135360608_135369405_135369604_135370035_135370143_135388921_135389127_135399061
transcript_162094.nic	chr5	-	919	6	NIC	ENSG00000113648.17	novel	775	5	NA	NA	-25	-122	combination_of_known_junctions	FALSE	canonical	3	82	junction_1	264.214761131925	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGAGAGTTAACTAATAT	-135389333	True	NA	-8	True	AATAAA	-28	NA	135399263	135359843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_135359943_135360496_135360605_135369405_135369604_135370035_135370143_135388921_135389127_135399061
transcript_162095.nic	chr5	-	927	6	NIC	ENSG00000113648.17	novel	775	5	NA	NA	-30	-122	combination_of_known_junctions	FALSE	canonical	3	82	junction_1	283.384826693315	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGAGAGTTAACTAATAT	-135399224	False	NA	-8	True	AATAAA	-28	NA	135399268	135359843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_135359943_135360496_135360608_135369405_135369604_135370035_135370143_135388921_135389127_135399061
transcript_162096.known	chr5	-	924	5	FSM	ENSG00000113648.17	ENST00000423969.6	924	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	290.826731061641	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAAATAAGGCTTTGGTT	-135389299	True	NA	NA	False	NA	NA	NA	135399229	135334855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_135335142_135343259_135343435_135345967_135346058_135388921_135389127_135399061
transcript_1621.nnic	chr1	+	2882	14	NNC	ENSG00000078900.15	novel	1668	11	NA	NA	-7083	536	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	5.76974356695359	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGGTGGGTCAGCTTTT	3674644	True	NA	21	True	GATAAA	-15	NA	3675282	3733903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_3675397_3682332_3682431_3683059_3683181_3707548_3707792_3722020_3722208_3723353_3723470_3727114_3727225_3727627_3727771_3728128_3728218_3729326_3729449_3729999_3730149_3730926_3731066_3731462_3731557_3732746
transcript_162100.known	chr5	-	966	6	FSM	ENSG00000113648.17	ENST00000508785.5	966	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	293.79312449409	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAATATTTTTTGTTCC	-135389247	True	NA	NA	False	NA	NA	NA	135399177	135359396	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_135359629_135360496_135360605_135369405_135369604_135370035_135370143_135388921_135389127_135399061
transcript_162101.known	chr5	-	861	6	FSM	ENSG00000113648.17	ENST00000507868.5	861	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	289.78502376762	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGGGTGCTGCCGAGTGT	-135389274	True	NA	NA	False	NA	NA	NA	135399204	135350813	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_135350914_135360496_135360605_135369405_135369604_135370035_135370143_135388921_135389127_135399061
transcript_162102.known	chr5	+	1464	8	FSM	ENSG00000145832.15	ENST00000433282.6	1464	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	4.14039335605413	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCACATTGTTTCTCTGT	135834596	True	NA	NA	False	AATAAA	-14	NA	135834713	135883448	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_135834894_135842415_135842460_135850424_135850497_135852562_135852822_135871460_135871719_135874020_135874155_135879967_135880098_135883061
transcript_162104.known	chr5	-	1971	4	FSM	ENSG00000145824.13	ENST00000337225.5	1971	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	4.10960933531265	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTCTAGACTGCCACCT	NA	False	NA	0	True	AATAAA	-19	NA	135579279	135570682	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_135571869_135574571_135574686_135578433_135578540_135578714
transcript_162107.known	chr5	+	7013	8	FSM	ENSG00000113658.18	ENST00000545279.6	7013	8	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	45.6302799572783	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAATGTGTCTTTTTTTGT	136129890	True	NA	11	True	AATAAA	-13	NA	136132844	136182733	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_136132963_136147831_136147907_136153591_136154164_136160855_136161108_136163271_136163392_136172433_136172656_136174375_136174633_136177336
transcript_162113.known	chr5	+	6937	7	FSM	ENSG00000113658.18	ENST00000545620.5	6937	7	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	45.879068090894	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATGTGTCTTTTTTTGTT	136129892	True	NA	12	True	AATAAA	-14	NA	136132846	136182734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_136132963_136153591_136154164_136160855_136161108_136163271_136163392_136172433_136172656_136174375_136174633_136177336
transcript_162122.known	chr5	+	669	2	FSM	ENSG00000113658.18	ENST00000507118.5	669	2	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGAGTGGAGAGTCCAGG	136129892	True	NA	NA	False	AAAAAG	-27	NA	136132846	136154144	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_136132963_136153591
transcript_162126.known	chr5	+	688	3	FSM	ENSG00000249803.6	ENST00000657590.1	688	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	6.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTATGTGGATTTTTGAG	136465937	True	NA	27	True	AATAAA	-39	NA	136466695	136521145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_136466886_136520174_136520275_136520747
transcript_162130.known	chr5	+	1180	2	FSM	ENSG00000249803.6	ENST00000665110.1	1180	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTATGTGGATTTTTGAG	136465918	True	NA	27	True	AATAAA	-39	NA	136466676	136521145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_136466886_136520174
transcript_162131.known	chr5	+	1280	3	FSM	ENSG00000249803.6	ENST00000511165.6	1280	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTATGTGTGTTGTTCACA	136465918	True	NA	NA	False	AATAAA	-29	NA	136466676	136509632	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_136466886_136504599_136504694_136508655
transcript_162134.nnic	chr5	+	2257	4	Fusion	ENSG00000249803.6_ENSG00000250284.3	novel	1280	3	NA	NA	0	0	multi-exon	FALSE	canonical	3	6	junction_3	11.4309521329882	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTACAGATATTCTGTTG	136465918	True	NA	-4	True	AATAAA	-6	NA	136466676	136756145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr5_+_136466886_136600742_136600843_136753814_136753977_136754359
transcript_162136.known	chr5	-	4488	9	FSM	ENSG00000152377.14	ENST00000282223.11	4488	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	5.3619026473818	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCTGAGTGTTTGTATT	NA	False	NA	-3	True	AATAAA	-16	NA	137267055	136975299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_136978845_136979331_136979470_136985139_136985203_136988421_136988644_136992483_136992601_137067714_137067830_137112434_137112562_137140579_137140695_137267009
transcript_162140.known	chr5	-	6805	15	FSM	ENSG00000146021.15	ENST00000309755.9	6805	15	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	8.06858356939597	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTCAGTATTTCATTT	-137736014	True	NA	-10	True	AATAAA	-17	NA	137736089	137617499	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_137622127_137625752_137625897_137628296_137628438_137634036_137634166_137637293_137637396_137638952_137639151_137639859_137639978_137658130_137658281_137661914_137662032_137677544_137677655_137692284_137692448_137698286_137698409_137709749_137709857_137720464_137720585_137735632
transcript_162144.nnic	chr5	-	1378	7	NNC	ENSG00000146021.15	novel	423	4	NA	NA	-19	326	intron_retention	FALSE	canonical	2	4	junction_1	11.513277359447	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGGCTCATGACTGC	-137735959	False	NA	NA	False	AATAAA	-13	NA	137736034	137677090	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_137677445_137677544_137677655_137692284_137692448_137698286_137698409_137709749_137709857_137720464_137720585_137735632
transcript_162146.known	chr5	-	5465	23	FSM	ENSG00000031003.11	ENST00000033079.7	5465	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	4.15032608496853	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTGTAAATGTATGTTT	-138031538	True	NA	-8	True	AATAAA	-19	NA	138033031	137937959	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_137940349_137941943_137942046_137942874_137943039_137943132_137943217_137945901_137945998_137946227_137946312_137948954_137949185_137952627_137952710_137953335_137953466_137954165_137954377_137959615_137959764_137960165_137960215_137962404_137962470_137985256_137985390_137987460_137987617_137988273_137988316_138006989_138007148_138011007_138011150_138011767_138011946_138018301_138018515_138018954_138019147_138021030_138021198_138032781
transcript_162158.known	chr5	-	3098	22	FSM	ENSG00000031003.11	ENST00000425075.6	3098	22	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	4.38509121265575	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCGTGTGTACTTGGCTG	-138031593	True	NA	NA	False	CATAAA	-24	NA	138033086	137940171	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_137940349_137941943_137942046_137942874_137943039_137943132_137943217_137945901_137945998_137948954_137949185_137952627_137952710_137953335_137953466_137954165_137954377_137956476_137956543_137959615_137959764_137960165_137960215_137962404_137962470_137985256_137985390_137987460_137987617_137988273_137988316_138006989_138007148_138011007_138011150_138011767_138011946_138018301_138018515_138021030_138021198_138032781
transcript_162169.known	chr5	-	3198	22	FSM	ENSG00000112983.18	ENST00000230901.9	3198	22	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_12	151.850057323983	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTGTTCTGTGTGT	-138168678	True	NA	0	True	AATAAA	-19	NA	138178630	138156881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_138157268_138159554_138159600_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138166517_138166728_138167933_138168079_138168469_138168689_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
transcript_162177.known	chr5	-	2982	21	FSM	ENSG00000112983.18	ENST00000402931.5	2982	21	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_12	153.341930012636	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTGTTCTGTGTGT	-138168681	True	NA	0	True	AATAAA	-19	NA	138178633	138156881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_138157268_138159554_138159600_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138166517_138166728_138167933_138168079_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
transcript_162179.nic	chr5	-	3350	21	NIC	ENSG00000112983.18	novel	3198	22	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	3	126	junction_11	161.927174989252	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTGTTCTGTGTGT	NA	False	NA	0	True	AATAAA	-19	NA	138178992	138156881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_138157268_138159554_138159600_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138167933_138168079_138168469_138168689_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
transcript_162185.known	chr5	-	3005	21	FSM	ENSG00000112983.18	ENST00000454473.5	3005	21	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_11	176.352055559327	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTGTTCTGTGTGT	-138178296	False	NA	0	True	AATAAA	-19	NA	138178599	138156881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_138157268_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138166517_138166611_138167933_138168079_138168469_138168689_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
transcript_162188.nic	chr5	-	3515	21	NIC	ENSG00000112983.18	novel	3198	22	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	3	193	junction_11	162.779574885795	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTGTTCTGTGTGT	NA	False	NA	0	True	AATAAA	-19	NA	138178992	138156881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_138157268_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138166517_138166728_138167933_138168079_138168469_138168689_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
transcript_162191.known	chr5	-	2876	20	FSM	ENSG00000112983.18	ENST00000512140.5	2876	20	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_18	189.28293029439	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTGTATACAATAAACTGAA	-138168678	True	NA	-33	True	TTTAAA	-25	NA	138178630	138156914	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_138157268_138159554_138159600_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138166517_138166728_138167933_138168079_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138177570_138177668_138178595
transcript_162208.known	chr5	-	2967	20	FSM	ENSG00000112983.18	ENST00000411594.6	2967	20	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_10	173.161014209623	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAACTAGCCTTTG	-138178366	False	NA	-15	True	AATAAA	-4	NA	138178669	138156896	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_138157268_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138167933_138168079_138168469_138168689_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
transcript_162213.known	chr5	+	3095	19	FSM	ENSG00000112984.12	ENST00000394894.8	3095	19	0	0	0	0	multi-exon	TRUE	canonical	3	408	junction_9	40.8032390992143	869	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGAATCAAACATCATTC	138172471	True	NA	76	True	ATTAAA	-26	NA	138179111	138187723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_138179203_138179659_138179846_138181421_138181512_138181608_138181729_138182322_138182462_138182585_138182774_138182860_138182991_138183168_138183364_138183469_138183582_138183687_138183757_138183961_138184106_138184238_138184405_138184511_138184677_138184806_138184947_138185094_138185198_138185511_138185711_138185960_138186053_138186293_138186432_138187095
transcript_162284.known	chr5	-	3133	16	FSM	ENSG00000094880.11	ENST00000394886.7	3133	16	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_13	44.1935138529023	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTTAATATAACTGTTT	-138207009	True	NA	51	True	AATAAA	-16	NA	138213323	138187649	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_138189149_138189632_138189753_138189827_138189907_138191473_138191536_138191861_138191938_138192268_138192389_138192503_138192658_138198198_138198281_138198425_138198524_138198604_138198783_138201106_138201240_138201342_138201449_138202112_138202156_138206546_138206685_138212990_138213064_138213151
transcript_162301.known	chr5	-	557	6	FSM	ENSG00000112983.18	ENST00000515254.1	557	6	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_5	73.4302390027433	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAGATTCTGGAAGGGGA	-138168677	True	NA	NA	False	NA	NA	NA	138178629	138170729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
transcript_162302.known	chr5	-	1079	3	FSM	ENSG00000094880.11	ENST00000394884.7	1079	3	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_2	41.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGCTTTGAGTGTCATT	-138207029	True	NA	0	True	AATAAA	-21	NA	138213343	138205870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_138206685_138212990_138213064_138213151
transcript_162304.known	chr5	-	1988	8	FSM	ENSG00000146013.11	ENST00000274721.8	1988	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	4.24264068711928	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGCTCTTTTTCCATT	-138274479	True	NA	-25	True	ATTAAA	-13	NA	138274621	138252379	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_138253058_138253286_138253376_138253765_138253901_138254056_138254161_138257638_138257952_138259556_138259650_138264260_138264549_138274333
transcript_162309.nic	chr5	-	2224	14	NIC	ENSG00000158402.21	novel	2093	14	NA	NA	-67	0	combination_of_known_junctions	FALSE	canonical	3	116	junction_13	39.8063359114881	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGATTGTGAGCCTAGC	-138331929	False	NA	-12	True	AATAAA	-16	NA	138331939	138285268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_138285842_138286021_138286134_138286496_138286631_138287168_138287268_138289500_138289564_138290638_138290741_138291969_138292117_138319218_138319375_138325814_138325905_138326020_138326055_138328483_138328530_138329552_138329648_138330986_138331215_138331594
transcript_162310.known	chr5	-	2093	14	FSM	ENSG00000158402.21	ENST00000323760.11	2093	14	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_13	40.3722325338012	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGATTGTGAGCCTAGC	-138329456	True	NA	-12	True	AATAAA	-16	NA	138331804	138285268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_138285842_138286021_138286134_138286496_138286631_138287168_138287268_138289500_138289564_138290638_138290741_138291969_138292117_138319218_138319375_138325814_138325905_138326020_138326055_138328483_138328530_138329552_138329648_138330986_138331219_138331594
transcript_16232.known	chr1	+	5354	8	FSM	ENSG00000162738.6	ENST00000368061.3	5354	8	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_3	27.4575739523167	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGCATTCTGTTGCTTT	160395215	True	NA	11	True	AATAAA	-16	NA	160400563	160428670	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_160400870_160415647_160415909_160416061_160416183_160419001_160419610_160420410_160420548_160421051_160421188_160424051_160424284_160425117
transcript_162328.known	chr5	-	1556	11	FSM	ENSG00000158402.21	ENST00000415130.6	1556	11	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_8	62.7573900030905	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCTACCAACTTGTATCC	-138329446	True	NA	-1	True	ATTAAA	-20	NA	138331794	138285572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_138285842_138286021_138286134_138286496_138286631_138287168_138287268_138289500_138289564_138290638_138290741_138291969_138292117_138319218_138319375_138328483_138328530_138330986_138331215_138331594
transcript_162329.nic	chr5	-	1918	11	NIC	ENSG00000158402.21	novel	2093	14	NA	NA	21	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_8	63.1728580958627	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGATTGTGAGCCTAGC	-138329500	True	NA	-12	True	AATAAA	-16	NA	138331848	138285268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_138285842_138286021_138286134_138286496_138286631_138287168_138287268_138289500_138289564_138290638_138290741_138291969_138292117_138319218_138319375_138328483_138328530_138330986_138331219_138331594
transcript_162349.known	chr5	+	4143	5	FSM	ENSG00000120709.11	ENST00000239906.10	4143	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	18.7683243791235	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTGTACTACAGTGTCT	138333204	True	NA	28	True	AATAAA	-33	NA	138338265	138349729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_138338308_138341183_138341414_138341808_138341867_138344824_138345610_138346701
transcript_162351.known	chr5	+	923	5	FSM	ENSG00000120709.11	ENST00000513056.5	923	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	44.1665880502445	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCAGCTGGAAATCTTCTC	138333204	True	NA	NA	False	NA	NA	NA	138338265	138347080	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_138338308_138341183_138341414_138341808_138341867_138345395_138345610_138346701
transcript_162355.known	chr5	+	551	4	FSM	ENSG00000120709.11	ENST00000511595.5	551	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	3.2659863237109	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCTCTCCTTTATCCAC	138331380	True	NA	NA	False	AATAGA	-44	NA	138332104	138337146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_138332186_138333432_138333529_138335384_138335486_138336873
transcript_162369.known	chr5	+	6724	24	FSM	ENSG00000120733.14	ENST00000314358.10	6724	24	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_9	41.8615505444872	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAGTGGACTAAATTAT	138349067	True	NA	NA	False	ATTAAA	-16	NA	138352684	138437027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_138352988_138372673_138372842_138375092_138375207_138377719_138377826_138379583_138379709_138381515_138381591_138386021_138386622_138391012_138392262_138393170_138393373_138398177_138398393_138399859_138400013_138415131_138415240_138417482_138417611_138418952_138419233_138420705_138420963_138424074_138424342_138425410_138425583_138426974_138427066_138427188_138427320_138427966_138428087_138429825_138429966_138430248_138430426_138431424_138431560_138435619
transcript_16237.known	chr1	-	1161	8	FSM	ENSG00000158764.7	ENST00000368029.4	1161	8	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_5	4.89064079103534	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTATGTTTCTTTGAATTC	-160954420	True	NA	-4	True	ACTAAA	-17	NA	160954809	160945024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_160945293_160947928_160948033_160950045_160950167_160950552_160950712_160951042_160951291_160952619_160952734_160954386_160954451_160954726
transcript_162383.nic	chr5	+	959	7	ISM	ENSG00000120733.14	ENST00000314358.10	6724	24	-30	50968	-30	4311	5prime_fragment	FALSE	canonical	3	246	junction_6	17.1601929541081	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAGAGAAAGCATAG	138349037	True	NA	19	True	AGTAAA	-16	NA	138352654	138386059	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_138352988_138372673_138372842_138375092_138375207_138377719_138377826_138379583_138379709_138381515_138381591_138386021
transcript_162387.known	chr5	+	2099	8	FSM	ENSG00000132563.17	ENST00000254901.9	2099	8	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	90.9653443765867	1176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGCCTCTGTGCTTTGT	138437005	True	NA	18	True	AATAAA	-23	NA	138439086	138446969	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_138439241_138441015_138441089_138441384_138441462_138444414_138444536_138444753_138444868_138445233_138445376_138445467_138445599_138445682
transcript_162391.known	chr5	+	1021	8	FSM	ENSG00000132563.17	ENST00000506158.5	1021	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	120.908128387648	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTAGCCTAGGTGTCTCA	138437020	True	NA	NA	False	NA	NA	NA	138439101	138445831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_138439241_138440940_138441089_138441384_138441462_138444414_138444536_138444753_138444868_138445233_138445376_138445467_138445599_138445682
transcript_162399.known	chr5	+	3137	2	FSM	ENSG00000120738.8	ENST00000239938.5	3137	2	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCGATTGGGTATGTGTT	138462919	True	NA	8	True	AATAAA	-4	NA	138465478	138469303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_138466069_138466756
transcript_162403.known	chr5	-	3874	11	FSM	ENSG00000120705.13	ENST00000499810.6	3874	11	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_9	226.079720452764	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTGTGTGCTTGAGATT	-138528695	True	NA	NA	False	ATTAAA	-16	NA	138543229	138506094	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_138508388_138508668_138508817_138510564_138510630_138511044_138511201_138511474_138511605_138512763_138512955_138513567_138513707_138517560_138517701_138518691_138518868_138542633_138542937_138543096
transcript_162404.known	chr5	-	3682	11	FSM	ENSG00000120705.13	ENST00000360541.10	3682	11	0	0	0	0	multi-exon	FALSE	canonical	3	571	junction_10	73.5918473745564	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTGTGTGCTTGAGATT	-138528702	True	NA	NA	False	ATTAAA	-16	NA	138543236	138506094	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_138508388_138508668_138508817_138510564_138510630_138511044_138511201_138511474_138511605_138512763_138512955_138513567_138513707_138517560_138517701_138518691_138518868_138542832_138542937_138543096
transcript_162415.nic	chr5	-	490	4	ISM	ENSG00000120705.13	ENST00000360541.10	3682	11	-26	11562	-26	-96	5prime_fragment	FALSE	canonical	3	571	junction_3	76.8938662486591	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGGAAAGGAAAAGAA	NA	False	NA	-4	True	NA	NA	NA	138543262	138517656	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_138517701_138518691_138518868_138542832_138542937_138543096
transcript_162424.known	chr5	-	4413	17	FSM	ENSG00000113013.16	ENST00000678384.1	4413	17	0	0	0	0	multi-exon	TRUE	canonical	1	42	junction_16	691.154194875319	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGATTGGTTTTATTCT	-138575024	False	NA	NA	False	CATAAA	-25	NA	138575166	138553755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_138556115_138556451_138556593_138556773_138556867_138557401_138557497_138557868_138557987_138558552_138558658_138559863_138560092_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574127_138574993
transcript_162425.known	chr5	-	4329	17	FSM	ENSG00000113013.16	ENST00000678794.1	4329	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	701.263045778829	1526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGATTGGTTTTATTCT	-138533448	True	NA	NA	False	CATAAA	-25	NA	138575340	138553755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_138556115_138556451_138556593_138556773_138556867_138557401_138557497_138557868_138557987_138558552_138558658_138559863_138560092_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573776_138573851_138574067_138574127_138575237
transcript_162426.known	chr5	-	4449	17	FSM	ENSG00000113013.16	ENST00000677988.1	4449	17	0	0	0	0	multi-exon	FALSE	canonical	2	101	junction_16	677.076239706431	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGATTGGTTTTATTCT	-138533511	True	NA	NA	False	CATAAA	-25	NA	138575403	138553755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_138556115_138556451_138556593_138556773_138556867_138557401_138557497_138557868_138557987_138558552_138558658_138559863_138560092_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574170_138575237
transcript_162433.known	chr5	-	4327	16	FSM	ENSG00000113013.16	ENST00000677425.1	4327	16	0	0	0	0	multi-exon	FALSE	canonical	2	69	junction_8	699.26044742523	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGATTGGTTTTATTCT	-138533525	True	NA	NA	False	CATAAA	-25	NA	138575417	138553755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_138556115_138556451_138556593_138556773_138556867_138557401_138557497_138557868_138557987_138558552_138558658_138559863_138560092_138561579_138561790_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574127_138575237
transcript_162435.known	chr5	-	4196	16	FSM	ENSG00000113013.16	ENST00000677064.1	4196	16	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_6	679.802736093346	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGATTGGTTTTATTCT	-138533529	True	NA	NA	False	CATAAA	-25	NA	138575421	138553755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_138556115_138556451_138556593_138556773_138556867_138557401_138557497_138557868_138557987_138558552_138558658_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574127_138575237
transcript_162437.known	chr5	-	3142	16	FSM	ENSG00000113013.16	ENST00000524109.2	3142	16	0	0	0	0	multi-exon	FALSE	canonical	3	2643	junction_4	115.096404036886	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTAGCCTGTCATTTTT	-138575533	True	NA	-3	True	TATAAA	-17	NA	138575675	138555826	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_138556115_138556451_138556593_138556773_138557497_138557868_138557987_138558552_138558658_138559863_138560092_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574127_138575237
transcript_162438.known	chr5	-	2120	16	FSM	ENSG00000113013.16	ENST00000507115.6	2120	16	0	0	0	0	multi-exon	FALSE	canonical	3	2643	junction_4	115.629292713107	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTTCTTGATGACTGTC	-138533539	True	NA	51	True	NA	NA	NA	138575431	138556406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_138556593_138556773_138556867_138557401_138557497_138557868_138557987_138558552_138558658_138559863_138560092_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574127_138575237
transcript_162447.known	chr5	-	2272	11	FSM	ENSG00000113013.16	ENST00000508003.2	2272	11	0	0	0	0	multi-exon	FALSE	canonical	3	2657	junction_1	116.448314715156	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTCCTGACTTACCCAA	-138533527	True	NA	NA	False	NA	NA	NA	138575419	138559102	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_138560092_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574127_138575237
transcript_162457.known	chr5	-	664	4	FSM	ENSG00000113013.16	ENST00000506477.5	664	4	0	0	0	0	multi-exon	FALSE	canonical	3	2861	junction_1	52.1301789327023	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTCATTTTTGGCCA	-138533519	True	NA	NA	False	NA	NA	NA	138575411	138570798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_138571142_138573762_138573851_138574067_138574127_138575237
transcript_162458.known	chr5	-	7459	12	FSM	ENSG00000113013.16	ENST00000649692.2	7459	12	0	0	0	0	multi-exon	FALSE	canonical	3	2755	junction_8	91.5952288627155	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTATTTCTGCTTTTCTG	-138533529	True	NA	-6	True	AATAAA	-18	NA	138575421	138554887	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_138556115_138556451_138556593_138556773_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574127_138575237
transcript_162462.known	chr5	+	3831	19	FSM	ENSG00000044115.21	ENST00000627109.2	3831	19	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_18	503.262823121083	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAAGAGCCCAAAGTCGT	138732291	True	NA	27	True	AATAAA	-21	NA	138753417	138935033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_138753511_138781922_138782030_138783176_138783373_138810037_138810205_138812182_138812303_138824529_138824800_138827514_138827719_138886211_138886293_138887489_138887643_138904348_138904442_138917741_138917899_138924509_138924711_138925255_138925408_138929245_138929357_138930472_138930655_138930829_138930936_138932577_138932713_138932887_138932959_138933801
transcript_162474.known	chr5	+	3754	18	FSM	ENSG00000044115.21	ENST00000302763.12	3754	18	0	0	0	0	multi-exon	FALSE	canonical	3	1423	junction_3	126.776538276763	964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGAGCCCAAAGTCGTC	138732298	True	NA	28	True	AATAAA	-22	NA	138753424	138935034	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_138753511_138781922_138782030_138783176_138783373_138810037_138810205_138812182_138812303_138824529_138824800_138827514_138827719_138886211_138886293_138887489_138887643_138904348_138904442_138917741_138917899_138924509_138924711_138925255_138925408_138929245_138929357_138930472_138930655_138930829_138930936_138932577_138932713_138933801
transcript_162488.known	chr5	+	2741	17	FSM	ENSG00000044115.21	ENST00000521724.5	2741	17	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_2	392.032519178894	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTCCAGGTGGTGAATTT	138732294	True	NA	-49	True	AATACA	-41	NA	138753420	138934213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_138753511_138781922_138782030_138810037_138810205_138812182_138812303_138824529_138824800_138827514_138827719_138886211_138886293_138887489_138887643_138904348_138904442_138917741_138917899_138924509_138924711_138925255_138925408_138929245_138929357_138930472_138930655_138930829_138930936_138932577_138932713_138933801
transcript_162509.known	chr5	-	1889	10	FSM	ENSG00000120725.13	ENST00000394817.7	1889	10	0	0	0	0	multi-exon	FALSE	canonical	2	34	junction_9	8.75312995165828	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGCTTCACACTAGTGCT	-139197256	True	NA	NA	False	ATTAAA	-17	NA	139198368	138946723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_138947474_138951170_138951336_138951787_138951885_139021170_139021293_139026800_139026993_139042619_139042720_139050937_139051047_139121034_139121174_139127738_139127854_139198268
transcript_162516.known	chr5	+	5513	19	FSM	ENSG00000280987.4	ENST00000394800.6	5513	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1186.15812162889	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGAGTTTGTTTTACAGT	139263666	True	NA	3	True	AATGAA	-14	NA	139274103	139331671	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139293452_139293576_139307238_139308328_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325295_139325663_139326162_139326285_139329344
transcript_162524.known	chr5	+	3970	18	FSM	ENSG00000280987.4	ENST00000361059.7	3970	18	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_4	1060.07183604596	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTAGGCCATGTTAATTG	139263665	True	NA	5	True	AATAAA	-7	NA	139274102	139330394	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139307238_139308328_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
transcript_162527.known	chr5	+	2243	17	FSM	ENSG00000280987.4	ENST00000504203.5	2243	17	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	1096.56809630946	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAAGAACAAAACCAATAG	139263666	True	NA	-26	True	AAGAAA	-23	NA	139274103	139329757	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
transcript_162531.known	chr5	+	3249	17	FSM	ENSG00000280987.4	ENST00000509990.5	3249	17	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	1024.41384917181	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGATTTAATGATTTCAAA	NA	False	NA	NA	False	NA	NA	NA	139273751	139329404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_139274162_139276120_139276151_139279050_139279130_139307238_139308328_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
transcript_162546.nic	chr5	+	4080	15	NIC	ENSG00000015479.20	novel	5069	15	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	251	junction_12	724.194094656049	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTATTTGTCAGTTGTGGTT	139293545	False	NA	-31	True	NA	NA	NA	139293636	139330441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_139293806_139307238_139308328_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325295_139325663_139326162_139326285_139329344
transcript_162547.known	chr5	+	5069	15	FSM	ENSG00000015479.20	ENST00000394805.8	5069	15	0	0	0	0	multi-exon	FALSE	canonical	3	1576	junction_1	445.291947341682	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTTACAGTTCTTTT	139263320	True	NA	9	True	AATGAA	-20	NA	139293739	139331677	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_139293806_139307238_139308328_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
transcript_162554.known	chr5	+	4018	15	FSM	ENSG00000015479.20	ENST00000618441.5	4018	15	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	697.855973094501	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTATTTGTCAGTTGTGGTT	139263358	True	NA	-31	True	NA	NA	NA	139293777	139330441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_139294029_139307238_139308328_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
transcript_162574.nic	chr5	+	2781	14	NIC	ENSG00000015479.20	novel	5069	15	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	234	junction_1	714.832044658748	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTATTTGTCAGTTGTGGTT	139263283	True	NA	-31	True	NA	NA	NA	139293702	139330441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_139293806_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
transcript_16258.nnic	chr1	-	2092	11	NNC	ENSG00000158769.18	novel	4639	10	NA	NA	-26	-986	intron_retention	FALSE	non_canonical	0	0	junction_1	529.552273151575	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTTGTTTAAATCCTGA	-160994104	True	NA	-11	True	AATAAA	-16	NA	161021201	160996196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_160996539_160998148_160998907_160999042_160999092_160999395_160999409_160999639_160999748_160999875_160999979_161000145_161000349_161000630_161000778_161001019_161001128_161001284_161001354_161021009
transcript_162582.known	chr5	+	2518	14	FSM	ENSG00000015479.20	ENST00000503811.5	2518	14	0	0	0	0	multi-exon	FALSE	canonical	3	493	junction_1	654.667194912556	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCCTGCTAGATTTCGTA	139263330	True	NA	NA	False	AAGAAA	-42	NA	139293749	139330002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_139294029_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
transcript_162617.nic	chr5	+	2406	12	ISM	ENSG00000015479.20	ENST00000510056.5	3040	14	-24	6812	-10	0	5prime_fragment	FALSE	canonical	3	1576	junction_1	322.618060906609	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAGCTTAAAAAGG	139263286	True	NA	NA	False	GATAAA	-36	NA	139293705	139322948	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_139293806_139307238_139308328_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597
transcript_162630.nic	chr5	+	2113	11	ISM	ENSG00000015479.20	ENST00000510056.5	3040	14	-93	7265	-37	-195	5prime_fragment	FALSE	canonical	3	1576	junction_1	330.523161064395	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAATCCCGGTAATTTCA	139293545	False	NA	NA	False	NA	NA	NA	139293636	139322495	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_139293806_139307238_139308328_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462
transcript_162664.known	chr5	+	865	6	FSM	ENSG00000281398.4	ENST00000507197.5	865	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	89.376954524083	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCTCTGAGTTAGAATCT	139263680	True	NA	NA	False	NA	NA	NA	139274117	139283244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139279934_139280059_139282738
transcript_162667.known	chr5	+	2383	5	FSM	ENSG00000281398.4	ENST00000505522.6	2383	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	89.9704812702477	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATTTTTTGTCATTAGGG	139263693	True	NA	16	True	AATAAA	-13	NA	139274130	139284899	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139282738
transcript_162671.known	chr5	+	679	4	FSM	ENSG00000281398.4	ENST00000514110.5	679	4	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	33.0252428706689	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACCTCCTGGGTTCAAGC	139263693	True	NA	NA	False	NA	NA	NA	139274130	139279586	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050
transcript_162673.known	chr5	+	2664	13	FSM	ENSG00000015479.20	ENST00000502499.5	2664	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	799.919561928295	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAATTGGTTATACATGT	139263302	True	NA	16	True	AATAAA	-18	NA	139293721	139330405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_139293806_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
transcript_162674.known	chr5	+	1264	5	FSM	ENSG00000281398.4	ENST00000648842.1	1264	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_4	75.3537490772689	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTCGATTTTTTTTTT	139263664	True	NA	7	True	AATAAA	-17	NA	139274101	139280947	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139279934
transcript_162676.known	chr5	+	1456	4	FSM	ENSG00000120727.13	ENST00000265192.9	1456	4	0	0	0	0	multi-exon	FALSE	canonical	3	3644	junction_3	239.708619415786	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGATGGTTGTGTTTATTG	139310187	True	NA	12	True	AATAAA	-16	NA	139341853	139369717	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_139341981_139363758_139363923_139364563_139364744_139368732
transcript_162678.known	chr5	+	815	3	FSM	ENSG00000120727.13	ENST00000510409.1	815	3	0	0	0	0	multi-exon	FALSE	canonical	3	3803	junction_2	205	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGATTGCACCATTGCAC	139310190	True	NA	NA	False	NA	NA	NA	139341856	139365090	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_139341981_139363758_139363923_139364563
transcript_162681.known	chr5	+	468	3	FSM	ENSG00000120727.13	ENST00000511706.5	468	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	2105	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTAATAAAAGTGCTGAGA	139310211	True	NA	NA	False	NA	NA	NA	139341877	139368933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_139341981_139363758_139363923_139368732
transcript_162684.known	chr5	-	4513	1	FSM	ENSG00000228672.4	ENST00000434752.4	4513	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTGAGGTGCCTGATT	-139394311	False	793	0	True	AATAAA	-34	NA	139395104	139390591	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_139390600_139395100
transcript_162685.known	chr5	-	680	6	FSM	ENSG00000170469.11	ENST00000450845.7	680	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	17.6136310850432	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCAGCCTCTGCCTTCTC	-139403296	True	NA	-5	True	AATAAA	-33	NA	139404089	139396766	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_139396930_139397040_139397144_139401754_139401826_139401914_139402046_139402627_139402694_139403943
transcript_162686.known	chr5	-	646	4	FSM	ENSG00000170469.11	ENST00000451821.6	646	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	2.86744175568088	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACCTTCTTAGTCCACCT	-139403274	True	NA	0	True	CATAAA	-34	NA	139404067	139401500	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_139401826_139401914_139402046_139402627_139402694_139403943
transcript_162689.known	chr5	-	5102	8	FSM	ENSG00000170464.10	ENST00000302060.10	5102	8	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	12.2557774797298	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTACTTTTCCTTGGTTC	-139437108	True	NA	NA	False	ATTAAA	-20	NA	139439525	139410202	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_139414273_139420052_139420226_139422707_139422818_139425004_139425115_139426171_139426358_139428537_139428684_139437371_139437559_139439405
transcript_162697.known	chr5	-	1031	10	FSM	ENSG00000249751.4	ENST00000618155.3	1031	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	4.36597393430856	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTAATTACTTTTAAGGTC	-139462400	True	NA	-14	True	ATTAAA	-19	NA	139462743	139448559	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_139448909_139449077_139449175_139454601_139454639_139454824_139454924_139455322_139455437_139456473_139456519_139457544_139457605_139457756_139457808_139458138_139458184_139462609
transcript_162701.known	chr5	+	2087	2	FSM	ENSG00000286403.1	ENST00000657350.1	2087	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTGTTTTTTGTTTTTTT	139503132	True	NA	NA	False	NA	NA	NA	139503241	139511374	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_139503814_139509859
transcript_162705.nic	chr5	+	2065	8	NIC	ENSG00000131508.16	novel	901	8	NA	NA	59	6	intron_retention	FALSE	canonical	3	64	junction_2	1039.726985358	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTGAATAGGCTTTT	139561096	True	NA	NA	False	AATAAA	-27	NA	139561225	139627692	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_139561816_139562243_139562408_139600371_139600436_139614585_139614618_139614696_139614775_139614860_139614967_139623367_139623462_139626755
transcript_162708.known	chr5	+	2530	7	FSM	ENSG00000131508.16	ENST00000398733.8	2530	7	0	0	0	0	multi-exon	FALSE	canonical	3	2007	junction_1	243.165752797003	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTCACCTTGTCTTATC	139538798	True	NA	7	True	AATAAA	-24	NA	139561338	139628434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_139561816_139600371_139600436_139614585_139614618_139614696_139614775_139614860_139614967_139623367_139623462_139626755
transcript_162716.nic	chr5	+	1955	4	NIC	ENSG00000171604.12	novel	2601	3	NA	NA	-28	3	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	327.078312063368	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAACTGCTTTTTCGGAA	139644546	True	NA	-59	True	CATAAA	-17	NA	139648320	139683114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_139648846_139679846_139679941_139680363_139681448_139682862
transcript_162717.nic	chr5	+	2723	4	NIC	ENSG00000171604.12	novel	2601	3	NA	NA	-28	0	intron_retention	FALSE	canonical	3	62	junction_1	327.078312063368	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCGCTGGCTTCTTGCTC	139644546	True	NA	34	True	AATAAA	-25	NA	139648320	139683882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_139648846_139679846_139679941_139680363_139681448_139682862
transcript_162719.known	chr5	+	2601	3	FSM	ENSG00000171604.12	ENST00000302517.8	2601	3	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_1	89	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCGCTGGCTTCTTGCTC	139644574	True	NA	34	True	AATAAA	-25	NA	139648348	139683882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_139648846_139680363_139681448_139682862
transcript_162723.known	chr5	+	1892	3	FSM	ENSG00000171604.12	ENST00000511048.1	1892	3	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	336	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTTCGTTTATCCATT	139647168	True	NA	NA	False	AATGAA	-2	NA	139648932	139683593	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_139649010_139680363_139681448_139682862
transcript_162725.known	chr5	+	777	2	FSM	ENSG00000171604.12	ENST00000504844.1	777	2	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGCAGTTTGCGCAGTC	139648616	False	NA	NA	False	NA	NA	NA	139648711	139681006	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_139648846_139680363
transcript_162729.known	chr5	+	665	4	FSM	ENSG00000120306.11	ENST00000509589.5	665	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	246.61846375863	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGCCATGTTTT	140172255	True	NA	NA	False	GATAAA	-26	NA	140175155	140244810	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140175286_140194445_140194653_140243304_140243464_140244641
transcript_162730.known	chr5	+	462	3	FSM	ENSG00000120306.11	ENST00000644078.1	462	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	234.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTTCTTTCTTTGACA	140172316	True	NA	NA	False	AATAAA	-23	NA	140175216	140228915	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140175286_140194445_140194653_140228729
transcript_162731.known	chr5	+	790	3	FSM	ENSG00000120306.11	ENST00000261811.6	790	3	0	0	0	0	multi-exon	FALSE	canonical	3	481	junction_1	38	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTGTCTAAATGATTCC	140172287	True	NA	6	True	AATAAA	-17	NA	140175187	140243789	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140175286_140194445_140194653_140243304
transcript_162733.nic	chr5	+	673	2	ISM	ENSG00000120306.11	ENST00000509789.2	813	3	-90	38263	-58	0	5prime_fragment	FALSE	canonical	2	20	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTGTCTAAATGATTCC	140172197	True	NA	6	True	AATAAA	-17	NA	140175097	140243789	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_140175286_140243304
transcript_162734.known	chr5	-	1336	4	FSM	ENSG00000113068.10	ENST00000261813.9	1336	4	0	0	0	0	multi-exon	FALSE	canonical	3	560	junction_3	46.0241482509152	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCACTGACTGTGATCTG	-140295745	True	NA	14	True	NA	NA	NA	140303101	140245034	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140246058_140281448_140281534_140300415_140300583_140303040
transcript_162736.known	chr5	-	1091	3	FSM	ENSG00000113068.10	ENST00000510217.1	1091	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	310.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATTTGCAAATTATGTT	-140295757	True	NA	-76	True	NA	NA	NA	140303113	140245124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140246058_140281448_140281534_140303040
transcript_162737.known	chr5	-	787	3	FSM	ENSG00000113068.10	ENST00000507185.1	787	3	0	0	0	0	multi-exon	FALSE	canonical	3	560	junction_2	13	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAGGATGGTGCTCCAAT	-140295730	True	NA	NA	False	NA	NA	NA	140303086	140280959	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140281534_140300415_140300583_140303040
transcript_162738.known	chr5	-	2358	6	FSM	ENSG00000113070.8	ENST00000230990.7	2358	6	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_2	2.78567765543682	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTTGTCTGTTTGTTTT	-140346253	True	NA	0	True	AATAAA	-19	NA	140346603	140332842	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140334281_140334657_140334749_140335871_140336028_140342634_140342813_140345910_140346085_140346282
transcript_162742.nic	chr5	+	4726	26	ISM	ENSG00000131503.21	ENST00000421134.5	4814	27	-166	2009	-130	0	5prime_fragment	FALSE	canonical	3	57	junction_11	117.591659568185	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAGAGGAACAGAAAA	140401671	False	NA	NA	False	AAAAAG	-19	NA	140401683	140524133	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_140402274_140436103_140436258_140438460_140438618_140440118_140440267_140440994_140441143_140445741_140445976_140449210_140449306_140458624_140458863_140459163_140459356_140464666_140464777_140472238_140472296_140482579_140482668_140485120_140485249_140485588_140485733_140486957_140487061_140496519_140497279_140504820_140504967_140505121_140505234_140505723_140505870_140506834_140506978_140507784_140507999_140509636_140509813_140510018_140510182_140512827_140512924_140513362_140513480_140524065
transcript_162751.nic	chr5	+	4539	25	ISM	ENSG00000131503.21	ENST00000297183.10	7606	33	0	15285	0	0	5prime_fragment	FALSE	canonical	3	53	junction_10	114.634496153354	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAGAGGAACAGAAAA	140387783	True	NA	NA	False	AAAAAG	-19	NA	140401813	140524133	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_140402274_140436103_140436258_140438460_140438618_140440118_140440267_140440994_140441143_140445741_140445976_140449210_140449306_140458624_140458863_140459163_140459356_140464666_140464777_140482579_140482668_140485120_140485249_140485588_140485733_140486957_140487061_140496519_140497279_140504820_140504967_140505121_140505234_140505723_140505870_140506834_140506978_140507784_140507999_140509636_140509813_140510018_140510182_140512827_140512924_140513362_140513480_140524065
transcript_162768.nnic	chr5	+	2094	12	NNC	ENSG00000131503.21	novel	4814	27	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_11	101.034156731505	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTGTTTCCTTAGTCTT	140387777	True	NA	11	True	AATAAA	-20	NA	140401807	140472475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_140402274_140436103_140436258_140438460_140438618_140440118_140440267_140440994_140441143_140445741_140445976_140449210_140449306_140458624_140458863_140459163_140459356_140464666_140464777_140472238_140472296_140472380
transcript_16277.known	chr1	-	4639	10	FSM	ENSG00000158769.18	ENST00000368026.11	4639	10	0	0	0	0	multi-exon	FALSE	canonical	3	1456	junction_3	143.451458645963	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCCAGCTTATTACCC	-160994055	True	NA	-13	True	ATTAAA	-18	NA	161021152	160995210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_160998907_160999042_160999092_160999395_160999409_160999639_160999748_160999875_160999979_161000145_161000349_161000630_161000778_161001019_161001128_161001284_161001354_161021009
transcript_162770.known	chr5	+	2135	11	FSM	ENSG00000131503.21	ENST00000394723.7	2135	11	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_2	33.520739848637	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTTCCTTAGTCTTCT	140387823	True	NA	13	True	AATAAA	-22	NA	140401853	140472477	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140402274_140436103_140436258_140438460_140438618_140440118_140440267_140440994_140441143_140445741_140445976_140449210_140449306_140458624_140458863_140459163_140459356_140464666_140464777_140472238
transcript_162771.nic	chr5	+	2273	11	NIC	ENSG00000131503.21	novel	2135	11	NA	NA	-140	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_2	90.854884293581	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTTCCTTAGTCTTCT	140401659	False	NA	13	True	AATAAA	-22	NA	140401673	140472477	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_140402274_140436103_140436258_140438502_140438618_140440118_140440267_140440994_140441143_140445741_140445976_140449210_140449306_140458624_140458863_140459163_140459356_140464666_140464777_140472238
transcript_162777.known	chr5	+	2035	11	FSM	ENSG00000131503.21	ENST00000394722.7	2035	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	110.379572385474	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTTCCTTAGTCTTCT	140387890	False	NA	13	True	AATAAA	-22	NA	140401920	140472477	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140402274_140436103_140436258_140438493_140438618_140440118_140440267_140440994_140441143_140445741_140445976_140449210_140449306_140458624_140458863_140459163_140459356_140464666_140464777_140472238
transcript_162778.known	chr5	+	2064	10	FSM	ENSG00000131503.21	ENST00000616482.4	2064	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	107.532711072572	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGTTTCCTTAGTCTTC	140387783	True	NA	12	True	AATAAA	-21	NA	140401813	140472476	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140402274_140436103_140436258_140438460_140438618_140440118_140440267_140440994_140441143_140445741_140445976_140449210_140449306_140458624_140458863_140459163_140459356_140472238
transcript_162780.nic	chr5	+	4572	25	ISM	ENSG00000131503.21	ENST00000297183.10	7606	33	-13	15265	-13	20	5prime_fragment	FALSE	canonical	3	53	junction_10	114.634496153354	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAACAGGAAGAAGATGAA	140387770	True	NA	NA	False	AAAAAG	-39	NA	140401800	140524153	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_140402274_140436103_140436258_140438460_140438618_140440118_140440267_140440994_140441143_140445741_140445976_140449210_140449306_140458624_140458863_140459163_140459356_140464666_140464777_140482579_140482668_140485120_140485249_140485588_140485733_140486957_140487061_140496519_140497279_140504820_140504967_140505121_140505234_140505723_140505870_140506834_140506978_140507784_140507999_140509636_140509813_140510018_140510182_140512827_140512924_140513362_140513480_140524065
transcript_162785.nnic	chr5	+	2724	16	ISM	ENSG00000131503.21	ENST00000421134.5	4814	27	-49	29368	-13	227	5prime_fragment	FALSE	canonical	3	57	junction_11	131.699050869777	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTGAAAGAACTGCAGAAA	140387770	True	NA	59	True	AAAAAG	-35	NA	140401800	140496774	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_140402274_140436103_140436258_140438460_140438618_140440118_140440267_140440994_140441143_140445741_140445976_140449210_140449306_140458624_140458863_140459163_140459356_140464666_140464777_140472238_140472296_140482579_140482668_140485120_140485249_140485588_140485733_140486957_140487061_140496519
transcript_162789.nic	chr5	+	2667	15	ISM	ENSG00000131503.21	ENST00000297183.10	7606	33	-13	42644	-13	227	5prime_fragment	FALSE	canonical	3	53	junction_10	132.11206204876	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTGAAAGAACTGCAGAAA	140387770	True	NA	59	True	AAAAAG	-35	NA	140401800	140496774	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_140402274_140436103_140436258_140438460_140438618_140440118_140440267_140440994_140441143_140445741_140445976_140449210_140449306_140458624_140458863_140459163_140459356_140464666_140464777_140482579_140482668_140485120_140485249_140485588_140485733_140486957_140487061_140496519
transcript_162791.nnic	chr5	+	2625	15	NIC	ENSG00000131503.21	novel	4814	27	NA	NA	-13	227	combination_of_known_junctions	FALSE	canonical	3	53	junction_10	139.103984009614	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTGAAAGAACTGCAGAAA	140387770	True	NA	59	True	AAAAAG	-35	NA	140401800	140496774	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_140402274_140436103_140436258_140438502_140438618_140440118_140440267_140440994_140441143_140445741_140445976_140449210_140449306_140458624_140458863_140459163_140459356_140464666_140464777_140482579_140482668_140485120_140485249_140485588_140485733_140486957_140487061_140496519
transcript_162794.nic	chr5	+	862	4	ISM	ENSG00000131503.21	ENST00000616482.4	2064	10	-13	32280	-13	-5778	5prime_fragment	FALSE	canonical	3	301	junction_2	16.0069429380573	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAACATACAGAAGAAGGAG	140387770	True	NA	NA	False	NA	NA	NA	140401800	140440196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_140402274_140436103_140436258_140438460_140438618_140440118
transcript_162795.known	chr5	+	8246	36	FSM	ENSG00000254996.5	ENST00000532219.5	8246	36	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_33	107.34278489674	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATGCCTTGGCTCCA	140387877	True	NA	4	True	AGTAAA	-6	NA	140401907	140549569	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140402274_140436103_140436258_140438460_140438618_140440118_140440267_140440994_140441143_140445741_140445976_140449210_140449306_140458624_140458863_140459163_140459356_140464666_140464777_140482579_140482668_140485120_140485249_140485588_140485733_140486957_140487061_140496519_140497279_140504820_140504967_140505121_140505234_140505723_140505870_140506834_140506978_140507784_140507999_140509636_140509813_140510018_140510182_140512827_140512924_140513362_140513480_140524065_140524241_140525995_140526444_140526927_140527075_140527872_140528023_140528183_140529797_140535361_140535539_140537388_140537590_140538085_140538262_140538918_140539084_140542171_140542282_140548905_140549077_140549233
transcript_162796.known	chr5	-	1328	5	FSM	ENSG00000213523.12	ENST00000336283.9	1328	5	0	0	0	0	multi-exon	FALSE	canonical	3	832	junction_4	143.051345676998	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGTTTCAGTGTGAAC	-140549044	True	NA	-23	True	NA	NA	NA	140557473	140550067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140550912_140551060_140551170_140551981_140552185_140557146_140557273_140557427
transcript_162798.known	chr5	-	978	5	FSM	ENSG00000213523.12	ENST00000520427.1	978	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	496.761008936893	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCGGACACCATCTCCTAT	-140557665	False	NA	NA	False	NA	NA	NA	140557677	140550681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140550912_140551060_140551170_140551981_140552185_140557146_140557333_140557427
transcript_162802.nic	chr5	-	737	4	NIC	ENSG00000213523.12	novel	1328	5	NA	NA	-13	65	combination_of_known_junctions	FALSE	canonical	3	74	junction_2	445.890868561654	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTAGTCCCCTCTGGTGTCC	-140549057	True	NA	-7	True	NA	NA	NA	140557486	140550468	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_140550912_140551060_140551170_140557146_140557273_140557427
transcript_162804.known	chr5	+	693	3	FSM	ENSG00000243056.2	ENST00000310331.3	693	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	28	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGGCTCCAGTGTTCT	140547182	True	NA	11	True	AGTAAA	-13	NA	140547661	140549576	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140547841_140548905_140549077_140549233
transcript_162805.known	chr5	-	769	3	FSM	ENSG00000213523.12	ENST00000602875.5	769	3	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	530	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTACTCATAACATGC	-140549017	True	NA	-90	True	NA	NA	NA	140557446	140550551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140550912_140551060_140551170_140557146
transcript_162807.known	chr5	-	1466	4	FSM	ENSG00000213523.12	ENST00000602775.5	1466	4	0	0	0	0	multi-exon	FALSE	canonical	3	1109	junction_2	42.9495828462474	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGTTTCAGTGTGAAC	-140549027	True	NA	-23	True	NA	NA	NA	140557456	140550067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140550912_140551060_140551170_140551981_140552185_140557146
transcript_162808.known	chr5	-	1802	3	FSM	ENSG00000213523.12	ENST00000523259.5	1802	3	0	0	0	0	multi-exon	FALSE	canonical	3	1134	junction_1	38	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATTTCAATAAAAACATCT	-140549017	True	NA	-72	True	NA	NA	NA	140557446	140550533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140550912_140551060_140552185_140557146
transcript_162812.known	chr5	-	2131	13	FSM	ENSG00000113108.20	ENST00000357560.9	2131	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	24.1982552171754	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGATGTGAGTATATTGGG	-140564244	True	NA	-1	True	AATAAA	-19	NA	140564598	140558267	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140558822_140560312_140560505_140560638_140560755_140561017_140561102_140561364_140561450_140561586_140561702_140561843_140561850_140562099_140562228_140562352_140562500_140562662_140562724_140563593_140563671_140563751_140563916_140564196
transcript_162813.known	chr5	-	1920	13	FSM	ENSG00000113108.20	ENST00000467078.5	1920	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	24.0212579465217	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTGGATGTGAGTATAT	-140564233	False	NA	-5	True	AATAAA	-15	NA	140564245	140558271	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140558822_140560312_140560505_140560638_140560755_140561017_140561102_140561364_140561450_140561586_140561702_140561843_140561996_140562099_140562228_140562352_140562500_140562662_140562724_140563593_140563671_140563751_140563916_140564196
transcript_162831.known	chr5	-	2801	10	FSM	ENSG00000113108.20	ENST00000510241.5	2801	10	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_8	11.8582158839607	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGATGTGAGTATATTGG	-140564242	True	NA	-2	True	AATAAA	-18	NA	140564596	140558268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140558822_140560312_140560505_140560638_140560755_140561017_140561102_140561364_140561450_140561586_140562228_140562352_140562500_140562662_140562724_140563593_140563671_140563751
transcript_162848.known	chr5	+	2666	3	FSM	ENSG00000176087.16	ENST00000323146.8	2666	3	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_1	156.5	941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTCTTGTGTCTTCTG	140560068	True	NA	19	True	AATAAA	-40	NA	140564827	140569100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140564859_140565872_140565972_140566564
transcript_162849.known	chr5	+	2789	3	FSM	ENSG00000176087.16	ENST00000612662.2	2789	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	360	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCACAGCCATGATTGTCT	140560059	True	NA	8	True	AATAAA	-29	NA	140564818	140569089	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140564859_140565747_140565972_140566564
transcript_162852.known	chr5	+	1905	20	FSM	ENSG00000113141.19	ENST00000417647.7	1905	20	0	0	0	0	multi-exon	FALSE	non_canonical	3	661	junction_7	84.1833179729259	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTGTTGAGCATGTC	140636436	True	NA	23	True	ATTAAA	-17	NA	140647828	140662480	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140647925_140648470_140648538_140651713_140651807_140652087_140652148_140652976_140653145_140653937_140654053_140654515_140654587_140654680_140654728_140655828_140655993_140657553_140657663_140658736_140658777_140658938_140659165_140659314_140659334_140659755_140659835_140660114_140660196_140660757_140660816_140661619_140661709_140661898_140662008_140662178_140662214_140662301
transcript_162862.known	chr5	+	1834	12	FSM	ENSG00000113119.13	ENST00000252100.6	1834	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	30.1736023867177	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCTCAGTGGTTGCAC	140637015	True	NA	23	True	AATAAA	-23	NA	140639503	140645408	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140639613_140639738_140639852_140641664_140641781_140641869_140642054_140642314_140642420_140642585_140642672_140642906_140643042_140643563_140643676_140643779_140643967_140644099_140644195_140644572_140644741_140644984
transcript_162867.nic	chr5	+	1234	12	ISM	ENSG00000113141.19	ENST00000417647.7	1905	20	-32	3370	-32	-1775	5prime_fragment	FALSE	canonical	3	661	junction_7	65.3327149012165	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGGAAAAGAAGAGACA	140636404	True	NA	13	True	NA	NA	NA	140647796	140659110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_140647925_140648470_140648538_140651713_140651807_140652087_140652148_140652976_140653145_140653937_140654053_140654515_140654587_140654680_140654728_140655828_140655993_140657553_140657663_140658736_140658777_140658938
transcript_162888.nic	chr5	+	2250	10	NIC	ENSG00000113119.13	novel	1865	12	NA	NA	-19	0	intron_retention	FALSE	canonical	3	77	junction_6	15.8745078663875	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACTTTGCCTCAGTGGTT	140636927	True	NA	19	True	AATAAA	-19	NA	140639415	140645404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_140639613_140639738_140639852_140641664_140642420_140642585_140642672_140642924_140643042_140643563_140643676_140643779_140643967_140644099_140644195_140644572_140644741_140644984
transcript_162904.nic	chr5	+	749	8	ISM	ENSG00000113141.19	ENST00000508301.5	868	9	-45	1265	-32	0	5prime_fragment	FALSE	canonical	3	661	junction_7	61.6626768336059	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTACAGTTTCTATACT	140636404	True	NA	NA	False	AATAAA	-23	NA	140647796	140654727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_140647925_140648470_140648538_140651713_140651807_140652087_140652148_140652976_140653145_140653937_140654053_140654515_140654587_140654680
transcript_162908.nic	chr5	+	702	7	ISM	ENSG00000113141.19	ENST00000508301.5	868	9	-45	1406	-32	-141	5prime_fragment	FALSE	canonical	3	672	junction_6	59.6920337137954	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTAAATATTATGGAAA	140636404	True	NA	NA	False	AAGAAA	-5	NA	140647796	140654586	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_140647925_140648470_140648538_140651713_140651807_140652087_140652148_140652976_140653145_140653937_140654053_140654515
transcript_162912.known	chr5	-	649	3	FSM	ENSG00000131495.9	ENST00000252102.9	649	3	0	0	0	0	multi-exon	FALSE	canonical	3	1856	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTTGGTCCTCCTGCCT	-140631957	True	NA	65	True	NA	NA	NA	140647630	140645284	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140645679_140647255_140647363_140647482
transcript_162913.known	chr5	-	627	3	FSM	ENSG00000131495.9	ENST00000512088.1	627	3	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	878	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTACCAGCTGCTGAAGC	-140631972	True	NA	-19	True	AATAAA	-21	NA	140647645	140645368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140645726_140647255_140647363_140647482
transcript_162919.known	chr5	+	2363	15	FSM	ENSG00000112855.17	ENST00000645065.1	2363	15	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	69.460016394693	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGGATAACATGTTAAATA	140689821	True	NA	-22	True	NA	NA	NA	140691452	140699271	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140691516_140691606_140691757_140693490_140693509_140693590_140693666_140693934_140694055_140694184_140694281_140695507_140695634_140695737_140695846_140696102_140696202_140696520_140696615_140696942_140697071_140697163_140697407_140697568_140697686_140697931_140698079_140698492
transcript_162921.known	chr5	+	2469	14	FSM	ENSG00000112855.17	ENST00000646468.1	2469	14	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	65.9784795468462	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTAAGTGTAGTAGTT	140689826	True	NA	-2	True	NA	NA	NA	140691457	140699291	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140691757_140693490_140693509_140693590_140693666_140693934_140694055_140694184_140694281_140695507_140695634_140695737_140695846_140696102_140696202_140696520_140696615_140696942_140697071_140697163_140697407_140697568_140697686_140697931_140698079_140698492
transcript_162924.known	chr5	+	2436	14	FSM	ENSG00000112855.17	ENST00000642970.1	2436	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	71.2958665822639	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTAAGTGTAGTAGTT	140689823	True	NA	-2	True	NA	NA	NA	140691454	140699291	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140691516_140691794_140692018_140693590_140693666_140693934_140694055_140694184_140694281_140695507_140695634_140695737_140695846_140696102_140696202_140696520_140696615_140696942_140697071_140697163_140697407_140697568_140697686_140697931_140698079_140698492
transcript_162928.known	chr5	+	2468	13	FSM	ENSG00000112855.17	ENST00000230771.9	2468	13	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_7	22.4493256518369	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTGGGTAATTTGTTA	140689823	True	NA	12	True	AATAAA	-13	NA	140691454	140699305	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140691757_140693590_140693666_140693934_140694055_140694184_140694281_140695507_140695634_140695737_140695846_140696102_140696202_140696520_140696615_140696942_140697071_140697163_140697407_140697568_140697686_140697931_140698079_140698492
transcript_162932.known	chr5	-	1902	13	FSM	ENSG00000170445.16	ENST00000507746.7	1902	13	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	149.290242108749	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTGAGATGGTCCCATC	-140683064	True	NA	-103	True	NA	NA	NA	140691415	140674004	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140674329_140674669_140674826_140675016_140675134_140676653_140676897_140676988_140677117_140677326_140677421_140677654_140677754_140677907_140678016_140679001_140679128_140679787_140679884_140683099_140683220_140690854_140690945_140691214
transcript_162933.known	chr5	-	1896	13	FSM	ENSG00000170445.16	ENST00000457527.6	1896	13	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_8	131.748155163133	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCGTGTGTCAGTGATGC	-140683026	True	NA	-2	True	AATAAA	-18	NA	140691377	140673903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140674329_140674678_140674826_140675016_140675134_140676653_140676897_140676988_140677117_140677326_140677421_140677654_140677754_140677907_140678016_140679061_140679128_140679787_140679884_140683099_140683220_140690854_140690945_140691214
transcript_162936.known	chr5	+	2346	12	FSM	ENSG00000112855.17	ENST00000642752.1	2346	12	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_6	57.269841197124	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATGTTAAATAAAATATTAA	140689821	True	NA	-13	True	NA	NA	NA	140691452	140699280	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140691757_140693590_140693666_140693934_140694055_140694184_140694281_140695507_140695634_140695737_140695846_140696520_140696615_140696942_140697071_140697163_140697407_140697568_140697686_140697931_140698079_140698492
transcript_162939.known	chr5	+	1562	12	FSM	ENSG00000112855.17	ENST00000508522.5	1562	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	56.7836258554282	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGACTTCACAACAACTAGC	140691349	True	NA	NA	False	NA	NA	NA	140691608	140698628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140691757_140693934_140694055_140694184_140694281_140695507_140695634_140695737_140695846_140696102_140696202_140696520_140696615_140696942_140697071_140697163_140697407_140697568_140697686_140697931_140698079_140698492
transcript_162940.known	chr5	-	1789	12	FSM	ENSG00000170445.16	ENST00000438307.6	1789	12	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_10	155.300561695088	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCACGGAGTCTGCGTGT	-140682990	True	NA	-13	True	AATAAA	-7	NA	140691341	140673914	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140674329_140674678_140674826_140675016_140675134_140676653_140676897_140676988_140677117_140677326_140677421_140677654_140677754_140677907_140678016_140679001_140679128_140679787_140679884_140690854_140690945_140691214
transcript_162946.known	chr5	-	1401	11	FSM	ENSG00000170445.16	ENST00000415192.6	1401	11	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_8	157.692866040287	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGCATATGTACTTCAA	-140682990	True	NA	-96	True	NA	NA	NA	140691341	140674200	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140674329_140674678_140674826_140675016_140675134_140676653_140676897_140676988_140677117_140677326_140677421_140677654_140677754_140677907_140678016_140683099_140683220_140690854_140690945_140691214
transcript_162951.known	chr5	-	2643	10	FSM	ENSG00000170445.16	ENST00000431330.7	2643	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	175.638798829646	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGTACGGGTGTAAACCCA	NA	False	NA	NA	False	NA	NA	NA	140691537	140673034	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140674329_140674678_140674826_140675016_140675134_140676653_140676897_140676988_140677117_140677326_140677421_140677654_140677754_140677907_140678016_140690854_140690945_140691214
transcript_162952.known	chr5	-	2507	10	FSM	ENSG00000170445.16	ENST00000675851.1	2507	10	0	0	0	0	multi-exon	TRUE	canonical	1	11	junction_7	172.210465548539	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGTACGGGTGTAAACCCA	-140683038	True	NA	NA	False	NA	NA	NA	140691389	140673034	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140674329_140674678_140674826_140675016_140675134_140676653_140676897_140676988_140677117_140677326_140677421_140677654_140677754_140683099_140683220_140690854_140690945_140691214
transcript_162958.nic	chr5	+	2381	8	NIC	ENSG00000120314.19	novel	2953	8	NA	NA	-72	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_7	54.4313835044093	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTGACTCTAAGATCTT	140664762	False	NA	21	True	AGTAAA	-18	NA	140664795	140672344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_140665104_140668233_140668335_140668414_140668503_140668611_140668792_140668890_140668991_140669078_140669249_140669332_140669691_140671268
transcript_162959.nic	chr5	+	4156	8	NIC	ENSG00000120314.19	novel	2953	8	NA	NA	-72	-5	intron_retention	FALSE	canonical	3	32	junction_7	54.4313835044093	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGGCTCTGTTCTGACC	140664762	False	NA	NA	False	AATAAA	-17	NA	140664795	140674119	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_140665104_140668233_140668335_140668414_140668503_140668611_140668792_140668890_140668991_140669078_140669249_140669332_140669691_140671268
transcript_162976.known	chr5	+	3852	7	FSM	ENSG00000120314.19	ENST00000358337.10	3852	7	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	26.7628473821453	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGACTCTAAGATCTTG	140660485	True	NA	22	True	AGTAAA	-19	NA	140664903	140672345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140665104_140668233_140668335_140668414_140668503_140668611_140668792_140668890_140668991_140669078_140669249_140669332
transcript_162993.known	chr5	+	2477	6	FSM	ENSG00000120314.19	ENST00000506393.5	2477	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	63.795297632349	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTGACTCTAAGATCTT	140660449	True	NA	21	True	AGTAAA	-18	NA	140664867	140672344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140665104_140668233_140668503_140668611_140668792_140668890_140669249_140669332_140669691_140671268
transcript_162997.known	chr5	+	735	6	FSM	ENSG00000146007.11	ENST00000506644.3	735	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	97.0373124112576	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGGTGGGGGCTCATGGT	140694839	True	NA	NA	False	NA	NA	NA	140700463	140705881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140700479_140700818_140700913_140702005_140702130_140703917_140704005_140704425_140704572_140705612
transcript_1630.nnic	chr1	-	1672	12	NNC	ENSG00000116213.16	novel	1692	12	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	79.9728259633357	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTCTCTTCTTGAAACG	-3646724	True	NA	-2	True	AATAAA	-20	NA	3650104	3630769	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_3631118_3631465_3631658_3632212_3632318_3633397_3633504_3634996_3635075_3635159_3635295_3635943_3636031_3636994_3637099_3638749_3638823_3646665_3646783_3647407_3647561_3649930
transcript_163006.known	chr5	-	915	5	FSM	ENSG00000170445.16	ENST00000509087.2	915	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	254.676633203755	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTGCGTGTGTCAGTGA	-140683002	True	NA	-5	True	AATAAA	-15	NA	140691353	140673906	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140674329_140674678_140674826_140675016_140675134_140690854_140690945_140691214
transcript_163009.known	chr5	-	1595	4	FSM	ENSG00000256453.2	ENST00000542735.2	1595	4	0	0	0	0	multi-exon	TRUE	canonical	2	10	junction_2	1.69967317119759	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTGTGCTGTCTTG	-140673469	True	NA	1	True	ATTAAA	-18	NA	140673576	140670793	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140671751_140672444_140672907_140673270_140673389_140673518
transcript_163012.known	chr5	-	2229	3	FSM	ENSG00000170445.16	ENST00000674819.1	2229	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	277	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCATATTGTTCACCAAATC	-140683026	True	NA	NA	False	NA	NA	NA	140691377	140688797	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140690774_140690854_140690945_140691214
transcript_163014.known	chr5	-	1229	3	FSM	ENSG00000170445.16	ENST00000502888.2	1229	3	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_1	16	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGACAGAGGTCTTGCTA	-140683002	True	NA	NA	False	AATACA	-3	NA	140691353	140682219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_140683220_140690854_140690945_140691214
transcript_163015.known	chr5	+	5404	4	FSM	ENSG00000255408.4	ENST00000522353.3	5404	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	85.4647425680451	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGGTGGTCATTTCTAA	140800960	True	NA	NA	False	AATAAA	-20	NA	140801056	141012347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140803592_140978948_140979008_140982474_140982564_141009626
transcript_163016.known	chr5	+	5374	4	FSM	ENSG00000204967.12	ENST00000530339.2	5374	4	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	81.6999932000541	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGGTGGTCATTTCTAA	140806524	True	NA	NA	False	AATAAA	-20	NA	140807067	141012347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140809573_140978948_140979008_140982474_140982564_141009626
transcript_163017.known	chr5	+	2808	2	FSM	ENSG00000204967.12	ENST00000672575.1	2808	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTTGACTTATTACCTCA	140806537	True	NA	NA	False	NA	NA	NA	140807080	140817546	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140809573_140817230
transcript_163020.known	chr5	+	2922	1	FSM	ENSG00000204963.6	ENST00000356878.5	2922	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCTGTTCAATTTTGCC	140834162	True	NA	NA	False	TATAAA	-17	NA	140834247	140837169	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140834200_140837200
transcript_163022.known	chr5	+	3788	4	FSM	ENSG00000250120.8	ENST00000506939.6	3788	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	75.5836549056004	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGTGCCAAGACTTCTGC	140855111	False	NA	55	True	NA	NA	NA	140856009	141011628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140857648_140978948_140979008_140982474_140982564_141009626
transcript_163025.known	chr5	+	5407	4	FSM	ENSG00000249158.7	ENST00000398640.7	5407	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	69.4694177318336	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGGTGGTCATTTCTAA	140868133	True	NA	NA	False	AATAAA	-20	NA	140868956	141012347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140871495_140978948_140979008_140982474_140982564_141009626
transcript_163030.known	chr5	+	5401	4	FSM	ENSG00000251664.5	ENST00000398631.3	5401	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	68.528988189103	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGGTGGTCATTTCTAA	140875029	True	NA	NA	False	AATAAA	-20	NA	140875307	141012347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140877840_140978948_140979008_140982474_140982564_141009626
transcript_163035.known	chr5	+	5408	4	FSM	ENSG00000239389.8	ENST00000289272.3	5408	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	78.8768378901915	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGGTGGTCATTTCTAA	140881948	True	NA	NA	False	AATAAA	-20	NA	140882123	141012347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140884663_140978948_140979008_140982474_140982564_141009626
transcript_163041.known	chr5	+	5896	4	FSM	ENSG00000248383.5	ENST00000253807.3	5896	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	83.5822947758675	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGGTGGTCATTTCTAA	140926178	True	NA	NA	False	AATAAA	-20	NA	140926298	141012347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140929326_140978948_140979008_140982474_140982564_141009626
transcript_163043.known	chr5	+	5725	4	FSM	ENSG00000243232.6	ENST00000289269.7	5725	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	57.2499393497981	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGGTGGTCATTTCTAA	140965877	True	NA	NA	False	AATAAA	-20	NA	140966475	141012347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_140969332_140978948_140979008_140982474_140982564_141009626
transcript_163045.nic	chr5	+	3433	3	ISM	ENSG00000243232.6	ENST00000289269.7	5725	4	15	29340	15	13527	5prime_fragment	FALSE	canonical	3	60	junction_1	63.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGGAAGGAAGGAAGATG	140965892	True	NA	NA	False	AAAAAG	-18	NA	140966490	140983007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_140969332_140978948_140979008_140982474
transcript_163046.known	chr5	+	4089	1	FSM	ENSG00000112852.7	ENST00000194155.7	4089	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTGCTGGAATCAAATA	141092443	True	NA	5	True	AATAAA	-21	NA	141094614	141098703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141094600_141098700
transcript_163047.known	chr5	+	869	2	FSM	ENSG00000113209.9	ENST00000623915.1	869	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGAGGCGGCCCCGGCCC	141134301	True	NA	NA	False	NA	NA	NA	141135228	141137449	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141135290_141136641
transcript_163048.known	chr5	+	3355	1	FSM	ENSG00000113205.5	ENST00000231130.3	3355	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACTGTTCTTTTCCATTT	141099836	True	NA	NA	False	ATTAAA	-19	NA	141100472	141103827	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141100500_141103800
transcript_163049.known	chr5	+	3410	1	FSM	ENSG00000113209.9	ENST00000231134.8	3410	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGGCTTTTTTCACT	141134278	True	NA	13	True	AATAAA	-13	NA	141135205	141138615	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141135200_141138600
transcript_16305.known	chr1	-	567	4	FSM	ENSG00000215845.11	ENST00000423014.3	567	4	0	0	0	0	multi-exon	FALSE	canonical	3	1124	junction_3	246.841379567257	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGGAAGCACTTAATGT	-161019815	True	NA	-13	True	AATAAA	-16	NA	161038964	161037630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_161037827_161037912_161038076_161038550_161038674_161038879
transcript_163050.known	chr5	+	2750	1	FSM	ENSG00000120322.4	ENST00000239444.4	2750	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTGTCTTGTTTTCACT	141177744	False	NA	NA	False	CATAAA	-28	NA	141177789	141180539	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141177800_141180500
transcript_163051.known	chr5	+	1963	2	FSM	ENSG00000120328.6	ENST00000624949.1	1963	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTTGTTTGAGATATTT	141208306	True	NA	NA	False	TATAAA	-15	NA	141208696	141211537	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141208943_141209820
transcript_163053.known	chr5	+	3971	1	FSM	ENSG00000113248.6	ENST00000231173.6	3971	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTGCCTGTTTCTCTGG	141244667	True	NA	13	True	AATAAA	-15	NA	141245394	141249365	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141245400_141249400
transcript_163054.known	chr5	-	603	2	FSM	ENSG00000178913.9	ENST00000624761.2	1508	2	0	905	0	-905	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGGGCGTCATGGAATC	-141306809	True	NA	NA	False	NA	NA	NA	141320781	141319899	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_141320239_141320517
transcript_163056.known	chr5	-	2295	1	FSM	ENSG00000178913.9	ENST00000313368.8	2295	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	632	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTATCTTGTTCTTTCA	-141306812	True	NA	-2	True	AATAAA	-25	NA	141320784	141318489	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_141318500_141320800
transcript_163057.known	chr5	+	544	2	FSM	ENSG00000272070.2	ENST00000606674.2	1992	2	0	1448	0	-85	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTTCTTTTGGGTGACT	141326075	True	NA	NA	False	NA	NA	NA	141326239	141327915	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141326638_141327769
transcript_163058.known	chr5	+	3148	1	FSM	ENSG00000272070.2	ENST00000606901.1	3148	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTATTGAGACCTTTCAT	141326045	True	NA	6	True	ACTAAA	-17	NA	141326209	141329357	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141326200_141329400
transcript_163059.known	chr5	+	4740	4	FSM	ENSG00000253910.3	ENST00000522605.2	4740	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	123.45309500643	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACGTTTCTGTATAAG	141359815	True	NA	24	True	AATAAA	-17	NA	141359993	141512975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141362557_141494806_141494866_141505392_141505482_141510946
transcript_16306.known	chr1	-	574	4	FSM	ENSG00000215845.11	ENST00000368023.7	574	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	725.545924727642	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGGAAGCACTTAATGT	-161019801	True	NA	-13	True	AATAAA	-16	NA	161038950	161037630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_161037827_161037912_161038076_161038550_161038695_161038879
transcript_163060.known	chr5	+	4761	4	FSM	ENSG00000253953.3	ENST00000519479.2	4761	4	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	119.30074042799	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACGTTTCTGTATAAG	141387112	True	NA	24	True	AATAAA	-17	NA	141387697	141512975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141390282_141494806_141494866_141505392_141505482_141510946
transcript_163061.known	chr5	+	4725	1	FSM	ENSG00000253953.3	ENST00000615384.1	4725	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGGCTGTTTCTTTTA	141387112	True	NA	4	True	AATAAA	-15	NA	141387697	141392422	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141387700_141392400
transcript_163065.known	chr5	+	4802	4	FSM	ENSG00000253846.3	ENST00000398610.3	4802	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	110.097936200256	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACGTTTCTGTATAAG	141412538	True	NA	24	True	AATAAA	-17	NA	141412986	141512975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141415612_141494806_141494866_141505392_141505482_141510946
transcript_163066.known	chr5	+	4775	4	FSM	ENSG00000254122.3	ENST00000398594.4	4775	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	107.344719892917	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACGTTTCTGTATAAG	141417207	True	NA	24	True	AATAAA	-17	NA	141417676	141512975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141420275_141494806_141494866_141505392_141505482_141510946
transcript_163067.known	chr5	+	4787	4	FSM	ENSG00000253873.6	ENST00000398587.7	4787	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	111.475956550679	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACGTTTCTGTATAAG	141420691	True	NA	24	True	AATAAA	-17	NA	141421050	141512975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141423661_141494806_141494866_141505392_141505482_141510946
transcript_163068.known	chr5	+	2346	4	FSM	ENSG00000240184.7	ENST00000617641.4	2346	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	122.52981496581	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACGTTTCTGTATAAGCG	141474598	True	NA	26	True	AATAAA	-19	NA	141475979	141512977	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141476147_141494806_141494866_141505392_141505482_141510946
transcript_163069.known	chr5	+	4758	4	FSM	ENSG00000240184.7	ENST00000308177.5	4758	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	90.4691475955569	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACGTTTCTGTATAAG	141474584	True	NA	24	True	AATAAA	-17	NA	141475965	141512975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141478547_141494806_141494866_141505392_141505482_141510946
transcript_16307.known	chr1	-	457	3	FSM	ENSG00000215845.11	ENST00000368024.5	457	3	0	0	0	0	multi-exon	FALSE	canonical	3	518	junction_2	605	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGGAAGCACTTAATGT	-161019828	True	NA	-13	True	AATAAA	-16	NA	161038977	161037630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_161037827_161037912_161038076_161038879
transcript_163070.known	chr5	+	812	4	FSM	ENSG00000242419.6	ENST00000618371.4	812	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	122.068286899861	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAATCAGGCCCATCCAT	141484636	True	NA	NA	False	NA	NA	NA	141485071	141511496	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141485186_141494806_141494866_141505392_141505482_141510946
transcript_163071.known	chr5	+	4763	4	FSM	ENSG00000242419.6	ENST00000306593.2	4763	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	113.774631032874	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACGTTTCTGTATAAG	141484594	True	NA	24	True	AATAAA	-17	NA	141485029	141512975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141487616_141494806_141494866_141505392_141505482_141510946
transcript_163072.known	chr5	+	4797	4	FSM	ENSG00000240764.4	ENST00000252087.3	4797	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	122.52981496581	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACGTTTCTGTATAAG	141488645	False	NA	24	True	AATAAA	-17	NA	141489080	141512975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141491701_141494806_141494866_141505392_141505482_141510946
transcript_163073.known	chr5	+	3633	1	FSM	ENSG00000253873.6	ENST00000622044.1	3633	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCTGGCTATTTTTTTG	141420687	True	NA	NA	False	ATTAAA	-16	NA	141421046	141424679	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141421000_141424700
transcript_163076.nic	chr5	-	5849	28	NNC	ENSG00000131504.18	novel	5843	29	NA	NA	-60	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	120.335653113077	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCTTACAGCTTCCTGT	-141619082	False	NA	-11	True	AATAAA	-14	NA	141619115	141515021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_141517009_141524142_141524230_141526037_141526174_141526296_141526460_141527570_141527698_141528452_141528583_141528701_141528942_141529171_141529274_141529602_141529698_141534334_141534434_141571427_141571437_141571925_141572041_141573491_141574209_141574966_141575147_141576229_141576295_141576755_141576872_141577474_141577592_141578224_141578344_141578514_141578626_141579087_141579197_141580743_141580884_141582311_141582376_141583205_141583293_141583484_141583616_141584123_141584226_141587041_141587198_141588223_141588251_141618797
transcript_163077.known	chr5	-	5789	28	NNC	ENSG00000131504.18	novel	5843	29	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	120.335653113077	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCTTACAGCTTCCTGT	-141613829	True	NA	-11	True	AATAAA	-14	NA	141619055	141515021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_141517009_141524142_141524230_141526037_141526174_141526296_141526460_141527570_141527698_141528452_141528583_141528701_141528942_141529171_141529274_141529602_141529698_141534334_141534434_141550498_141550508_141571925_141572041_141573491_141574209_141574966_141575147_141576229_141576295_141576755_141576872_141577474_141577592_141578224_141578344_141578514_141578626_141579087_141579197_141580743_141580884_141582311_141582376_141583205_141583293_141583484_141583616_141584123_141584226_141587041_141587198_141588223_141588251_141618797
transcript_163078.nic	chr5	-	4952	28	NNC	ENSG00000131504.18	novel	5843	29	NA	NA	-60	56	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	120.335653113077	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAAAGAAAACTGTT	-141619082	False	NA	NA	False	NA	NA	NA	141619115	141515918	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_141517009_141524142_141524230_141526037_141526174_141526296_141526460_141527570_141527698_141528452_141528583_141528701_141528942_141529171_141529274_141529602_141529698_141534334_141534434_141571427_141571437_141571925_141572041_141573491_141574209_141574966_141575147_141576229_141576295_141576755_141576872_141577474_141577592_141578224_141578344_141578514_141578626_141579087_141579197_141580743_141580884_141582311_141582376_141583205_141583293_141583484_141583616_141584123_141584226_141587041_141587198_141588223_141588251_141618797
transcript_163082.nnic	chr5	-	5735	26	NNC	ENSG00000131504.18	novel	4668	27	NA	NA	18	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	114.591196869568	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCTTACAGCTTCCTGT	-141613811	True	NA	-11	True	AATAAA	-14	NA	141619037	141515021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_141517009_141524142_141524230_141526037_141526174_141526296_141526460_141527570_141527698_141528452_141528583_141528701_141528942_141529171_141529274_141529602_141529698_141534334_141534434_141571925_141572041_141573491_141574209_141574966_141575147_141576229_141576295_141576755_141576872_141577474_141577592_141578224_141578344_141578514_141578626_141579087_141579197_141580743_141580884_141582311_141582376_141583205_141583293_141583484_141583616_141584123_141584226_141587041_141587198_141618797
transcript_163086.nic	chr5	-	2649	19	ISM	ENSG00000131504.18	ENST00000647433.1	5843	29	27	19360	27	-5581	5prime_fragment	FALSE	canonical	0	0	junction_1	114.068800984426	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAAGAGTTAAAGGTGTT	-141613802	True	NA	NA	False	AAGAAA	-24	NA	141619028	141534380	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_141534434_141571427_141571437_141571925_141572041_141573491_141574209_141574966_141575147_141576229_141576295_141576755_141576872_141577474_141577592_141578224_141578344_141578514_141578626_141579087_141579197_141580743_141580884_141582311_141582376_141583205_141583293_141583484_141583616_141584123_141584226_141587041_141587198_141588223_141588251_141618797
transcript_163087.nic	chr5	-	2631	18	ISM	ENSG00000131504.18	ENST00000518047.5	4668	27	-123	18406	18	-5581	5prime_fragment	FALSE	canonical	0	0	junction_1	125.789988104246	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAAGAGTTAAAGGTGTT	-141613811	True	NA	NA	False	AAGAAA	-24	NA	141619037	141534380	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_141534434_141571427_141571437_141571925_141572041_141573491_141574209_141574966_141575147_141576229_141576295_141576755_141576872_141577474_141577592_141578224_141578344_141578514_141578626_141579087_141579197_141580743_141580884_141582311_141582376_141583205_141583293_141583484_141583616_141584123_141584226_141587041_141587198_141618797
transcript_163088.nnic	chr5	-	2637	18	NIC	ENSG00000131504.18	novel	5843	29	NA	NA	-25	-5581	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	90.7167537545558	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAAGAGTTAAAGGTGTT	-141613799	True	NA	NA	False	AAGAAA	-24	NA	141619025	141534380	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_141534434_141571925_141572041_141573491_141574209_141574966_141575147_141576229_141576295_141576755_141576872_141577474_141577592_141578224_141578344_141578514_141578626_141579087_141579197_141580743_141580884_141582311_141582376_141583205_141583293_141583484_141583616_141584123_141584226_141587041_141587198_141588223_141588251_141618797
transcript_163089.nnic	chr5	-	2622	17	NIC	ENSG00000131504.18	novel	4668	27	NA	NA	18	-5581	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	105.55034343857	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAAGAGTTAAAGGTGTT	-141613811	True	NA	NA	False	AAGAAA	-24	NA	141619037	141534380	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_141534434_141571925_141572041_141573491_141574209_141574966_141575147_141576229_141576295_141576755_141576872_141577474_141577592_141578224_141578344_141578514_141578626_141579087_141579197_141580743_141580884_141582311_141582376_141583205_141583293_141583484_141583616_141584123_141584226_141587041_141587198_141618797
transcript_163091.known	chr5	-	5762	26	NNC	ENSG00000131504.18	novel	5843	29	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	114.591196869568	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCTTACAGCTTCCTGT	-141613829	True	NA	-11	True	AATAAA	-14	NA	141619055	141515021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_141517009_141524142_141524230_141526037_141526174_141526296_141526462_141527572_141527698_141528452_141528583_141528701_141528942_141529171_141529274_141529602_141529698_141534334_141534443_141571925_141572041_141573491_141574209_141574966_141575147_141576229_141576295_141576755_141576872_141577474_141577592_141578224_141578344_141578514_141578626_141579087_141579197_141580743_141580884_141582311_141582376_141583205_141583293_141583484_141583616_141584123_141584226_141587041_141587198_141618797
transcript_163093.known	chr5	-	5735	28	FSM	ENSG00000131504.18	ENST00000389054.8	5735	28	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	120.335653113077	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTTACAGCTTCCTGTG	-141613774	True	NA	-10	True	AATAAA	-15	NA	141619000	141515020	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_141517009_141524142_141524230_141526037_141526174_141526296_141526462_141527572_141527698_141528452_141528583_141528701_141528942_141529171_141529274_141529602_141529698_141534334_141534434_141571427_141571437_141571925_141572041_141573491_141574209_141574966_141575147_141576229_141576295_141576755_141576872_141577474_141577592_141578224_141578344_141578514_141578626_141579087_141579197_141580743_141580884_141582311_141582376_141583205_141583293_141583484_141583616_141584123_141584226_141587041_141587198_141588223_141588251_141618797
transcript_1631.known	chr1	-	1692	12	FSM	ENSG00000116213.16	ENST00000270708.12	1692	12	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	34.5160161649752	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTCTCTTCTTGAAACG	-3646723	True	NA	-2	True	AATAAA	-20	NA	3650103	3630769	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3631118_3631465_3631658_3632212_3632339_3633397_3633504_3634996_3635075_3635159_3635295_3635943_3636031_3636994_3637099_3638749_3638823_3646665_3646783_3647407_3647561_3649930
transcript_16310.known	chr1	-	626	3	FSM	ENSG00000215845.11	ENST00000318289.14	626	3	0	0	0	0	multi-exon	FALSE	canonical	3	1124	junction_2	139	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGGAAGCACTTAATGT	-161019788	True	NA	-13	True	AATAAA	-16	NA	161038937	161037630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_161038076_161038550_161038674_161038879
transcript_163100.known	chr5	-	1933	15	FSM	ENSG00000171720.10	ENST00000305264.8	1933	15	0	0	0	0	multi-exon	FALSE	canonical	3	1022	junction_12	79.3570142727517	985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCGCCTTTCTAGGAAT	-141631800	True	NA	-23	True	AATAAA	-21	NA	141636849	141620880	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_141621538_141625207_141625366_141625684_141625765_141626012_141626072_141626193_141626284_141627892_141627958_141628113_141628188_141628558_141628640_141629172_141629307_141629683_141629740_141629859_141629917_141630043_141630126_141634810_141634954_141636547_141636631_141636735
transcript_163110.nic	chr5	-	1808	14	NIC	ENSG00000171720.10	novel	1933	15	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	90	junction_12	301.359601584976	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCGCCTTTCTAGGAAT	-141631818	True	NA	-23	True	AATAAA	-21	NA	141636867	141620880	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_141621538_141625207_141625366_141625684_141625765_141626012_141626072_141626193_141626284_141627892_141627958_141628113_141628188_141628558_141628640_141629172_141629307_141629683_141629740_141629859_141629917_141630043_141630126_141636547_141636631_141636735
transcript_16312.known	chr1	-	813	2	FSM	ENSG00000215845.11	ENST00000486084.1	813	2	0	0	0	0	multi-exon	FALSE	canonical	3	1124	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTAGCTGGGAGGTGAT	-161019767	True	NA	NA	False	NA	NA	NA	161038916	161037897	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_161038674_161038879
transcript_16313.known	chr1	-	1807	11	FSM	ENSG00000158773.14	ENST00000368021.7	1807	11	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_2	4.10365690573664	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTGTCTGTTTTTCTTCC	-161042530	True	NA	NA	False	GATAAA	-15	NA	161045977	161039250	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_161040010_161040201_161040331_161040575_161040671_161040813_161040873_161041323_161041412_161041650_161041847_161042115_161042218_161042554_161042671_161042832_161042883_161043267_161043361_161045857
transcript_16314.known	chr1	-	1092	11	FSM	ENSG00000158773.14	ENST00000473969.6	1092	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	4.53431361950185	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGGGATTCAGGGGCTT	-161042515	True	NA	NA	False	NA	NA	NA	161045962	161039919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_161040010_161040201_161040331_161040575_161040671_161040813_161040873_161041323_161041412_161041650_161041847_161042115_161042218_161042585_161042671_161042832_161042883_161043267_161043361_161045857
transcript_16316.known	chr1	+	1038	5	FSM	ENSG00000162755.14	ENST00000490724.6	1038	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	11.4537111889553	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCTGCTTCACTTCAAAT	161097818	True	NA	-32	True	TATAAA	-16	NA	161098360	161100298	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161098405_161098665_161099063_161099345_161099506_161099597_161099797_161100060
transcript_163162.known	chr5	-	830	2	FSM	ENSG00000171720.10	ENST00000492506.1	830	2	0	0	0	0	multi-exon	FALSE	canonical	3	1117	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCCAGGCGTGGTGGCCCA	-141631794	True	NA	NA	False	NA	NA	NA	141636843	141635908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_141636631_141636735
transcript_163168.nic	chr5	-	4449	21	NIC	ENSG00000197948.11	novel	4319	20	NA	NA	-30	0	intron_retention	FALSE	canonical	2	35	junction_3	25.3189158535669	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGACCATATGTTCTTCCT	NA	False	NA	-11	True	AATAAA	-18	NA	141651448	141639302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_141641564_141641701_141641758_141642396_141642504_141643000_141643089_141644217_141644439_141644572_141644691_141644858_141644943_141645019_141645149_141645770_141645933_141646086_141646192_141646602_141646723_141647134_141647231_141647397_141647521_141647967_141648097_141648956_141649021_141649171_141649309_141649394_141649531_141649886_141649955_141650358_141650405_141651019_141651118_141651347
transcript_163177.nic	chr5	-	2765	21	NIC	ENSG00000197948.11	novel	2477	20	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	2	35	junction_3	25.3189158535669	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCAGGGGGCCTACGGTGC	NA	False	NA	-10	True	AATAAA	-44	NA	141651448	141640986	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_141641564_141641701_141641758_141642396_141642504_141643000_141643089_141644217_141644439_141644572_141644691_141644858_141644943_141645019_141645149_141645770_141645933_141646086_141646192_141646602_141646723_141647134_141647231_141647397_141647521_141647967_141648097_141648956_141649021_141649171_141649309_141649394_141649531_141649886_141649955_141650358_141650405_141651019_141651118_141651347
transcript_163191.known	chr5	-	4319	20	FSM	ENSG00000197948.11	ENST00000435817.7	4319	20	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_16	30.8784589054689	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACCATATGTTCTTCCTC	-141649080	True	NA	-10	True	AATAAA	-19	NA	141651418	141639301	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_141641564_141641701_141641758_141643000_141643089_141644217_141644439_141644572_141644691_141644858_141644943_141645019_141645149_141645770_141645933_141646086_141646192_141646602_141646723_141647134_141647231_141647397_141647521_141647967_141648097_141648956_141649021_141649171_141649309_141649394_141649537_141649886_141649955_141650358_141650405_141651019_141651118_141651347
transcript_16320.known	chr1	+	921	4	FSM	ENSG00000162755.14	ENST00000469647.5	921	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	21.6384431561566	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGATTTGTCTCTGAAATT	161097820	True	NA	13	True	ATTAAA	-16	NA	161098362	161100343	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161098405_161098665_161099063_161099597_161099797_161100060
transcript_16321.known	chr1	+	1333	4	FSM	ENSG00000162755.14	ENST00000392192.6	1333	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	23.5843639350783	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTCTCTGAAATTTTT	161097851	True	NA	16	True	ATTAAA	-19	NA	161098393	161100346	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161099063_161099345_161099506_161099578_161099797_161100060
transcript_16322.known	chr1	+	737	4	FSM	ENSG00000162755.14	ENST00000392191.6	737	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	21.1397466609439	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAAACTCTGACCAGAGC	161097897	True	NA	NA	False	NA	NA	NA	161098439	161099735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161098482_161098665_161099063_161099345_161099506_161099597
transcript_163235.nnic	chr5	+	2003	9	NNC	ENSG00000164620.9	novel	2154	8	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_6	82.6860591333267	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGCTTCGCATCCTGG	NA	False	NA	11	True	AATAAA	-16	NA	141636926	141641063	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_141637742_141638169_141638410_141638794_141638861_141638954_141639022_141639463_141639650_141639919_141640003_141640176_141640296_141640411_141640446_141640670
transcript_163237.nnic	chr5	+	2432	8	NNC	ENSG00000164620.9	novel	2154	8	NA	NA	-24	0	intron_retention	TRUE	canonical	3	25	junction_5	77.9036558310118	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGCTTCGCATCCTGG	NA	False	NA	11	True	AATAAA	-16	NA	141636925	141641063	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_141638410_141638794_141638861_141638954_141639022_141639463_141639650_141639919_141640003_141640176_141640296_141640411_141640446_141640670
transcript_163240.known	chr5	+	2154	8	FSM	ENSG00000164620.9	ENST00000444782.5	2154	8	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	62.2273645429339	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGCTTCGCATCCTGG	NA	False	NA	11	True	AATAAA	-16	NA	141636949	141641063	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141637742_141638169_141638410_141638794_141638861_141638954_141639022_141639463_141639650_141639919_141640296_141640411_141640446_141640670
transcript_163242.nnic	chr5	+	2211	8	NNC	ENSG00000164620.9	novel	2154	8	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	83.5683760126267	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGCTTCGCATCCTGG	NA	False	NA	11	True	AATAAA	-16	NA	141636931	141641063	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_141637742_141638130_141638410_141638794_141638861_141638954_141639022_141639463_141639650_141639919_141640296_141640411_141640446_141640670
transcript_163247.known	chr5	+	2536	7	FSM	ENSG00000164620.9	ENST00000297164.8	2536	7	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	38.0996500421373	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGCTTCGCATCCTGGC	141635569	True	NA	12	True	AATAAA	-17	NA	141636996	141641064	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141638410_141638794_141638861_141638954_141639022_141639463_141639650_141639919_141640296_141640411_141640446_141640670
transcript_163249.nic	chr5	+	2110	7	NIC	ENSG00000164620.9	novel	2154	8	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_3	92.3731863451487	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGCTTCGCATCCTGG	NA	False	NA	11	True	AATAAA	-16	NA	141636926	141641063	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_141637742_141638169_141638410_141638794_141638861_141639463_141639650_141639919_141640296_141640411_141640446_141640670
transcript_16325.nnic	chr1	-	667	5	NNC	ENSG00000143256.5	novel	598	4	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_4	773.887750258395	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAGCTGTAGCCTGAAGT	-161093887	True	NA	-5	True	ATTAAA	-15	NA	161118057	161100560	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_161100860_161102047_161102172_161102286_161102376_161110563_161110613_161117951
transcript_163251.known	chr5	+	1419	7	FSM	ENSG00000164620.9	ENST00000518856.1	1419	7	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	89.9685130105713	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACCATTACAGCTGCTT	141636961	True	NA	1	True	AATAAA	-6	NA	141637441	141641053	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141637749_141638794_141638861_141638954_141639022_141639463_141639650_141639919_141640296_141640411_141640446_141640670
transcript_163256.known	chr5	+	2461	6	FSM	ENSG00000164620.9	ENST00000518025.5	2461	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	90.0622007281634	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGCTTCGCATCCTGGC	141635577	True	NA	12	True	AATAAA	-17	NA	141637004	141641064	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141638410_141638794_141638861_141639463_141639650_141639919_141640296_141640411_141640446_141640670
transcript_16326.known	chr1	-	598	4	FSM	ENSG00000143256.5	ENST00000368010.4	598	4	0	0	0	0	multi-exon	FALSE	canonical	3	1445	junction_1	123.083530805529	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAGCTGTAGCCTGAAGT	-161093867	True	NA	-5	True	ATTAAA	-15	NA	161118037	161100560	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_161100860_161102047_161102172_161102286_161102376_161117951
transcript_163260.known	chr5	+	844	5	FSM	ENSG00000164620.9	ENST00000517794.1	844	5	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	54.4449263017226	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTTCTCTGTGGGCAG	141636956	True	NA	NA	False	AAAAAG	-23	NA	141637436	141639629	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141637742_141638169_141638410_141638794_141638861_141638954_141639022_141639463
transcript_163269.nic	chr5	-	5266	33	NIC	ENSG00000120318.16	novel	5258	33	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_32	34.9890607904814	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACCATTCTCATTCATTC	-141675894	True	NA	-6	True	AATAAA	-16	NA	141682271	141653402	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_141654436_141655361_141655401_141655620_141655759_141655868_141655933_141656063_141656100_141656193_141656277_141656503_141656638_141656717_141656847_141658364_141658480_141658578_141658654_141659407_141659477_141659778_141659927_141661683_141661790_141662042_141662256_141664921_141665086_141665310_141665375_141666423_141666644_141669708_141669812_141669921_141670064_141670511_141670629_141671264_141671401_141671569_141671753_141671894_141671981_141672101_141672302_141672551_141672659_141672740_141672926_141673012_141673134_141673400_141673471_141673604_141673809_141679544_141679657_141679760_141679823_141679962_141680472_141682172
transcript_16327.known	chr1	-	408	2	FSM	ENSG00000143256.5	ENST00000468311.1	408	2	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTAGCCTGAAGTTTTCT	-161093885	True	NA	0	True	ATTAAA	-20	NA	161118055	161100555	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_161100860_161117951
transcript_163270.known	chr5	-	5258	33	FSM	ENSG00000120318.16	ENST00000239440.9	5258	33	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_32	36.2988894458219	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATTCTCATTCATTCA	-141675853	True	NA	-5	True	AATAAA	-17	NA	141682230	141653401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_141654436_141655361_141655401_141655620_141655759_141655868_141655933_141656063_141656100_141656193_141656277_141656503_141656638_141656717_141656847_141658364_141658480_141658578_141658654_141659407_141659477_141659778_141659927_141661683_141661790_141662042_141662256_141664921_141665086_141665310_141665375_141666423_141666644_141669708_141669812_141669921_141670064_141670511_141670629_141671264_141671401_141671569_141671753_141671894_141671981_141672101_141672302_141672551_141672659_141672740_141672926_141673012_141673134_141673400_141673471_141673604_141673809_141679544_141679657_141679760_141679823_141679962_141680504_141682172
transcript_163272.nnic	chr5	-	5206	33	NNC	ENSG00000120318.16	novel	5258	33	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_13	41.8524076181705	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACCATTCTCATTCATTC	-141675894	True	NA	-6	True	AATAAA	-16	NA	141682271	141653402	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_141654436_141655361_141655401_141655620_141655759_141655868_141655933_141656063_141656100_141656193_141656277_141656503_141656638_141656717_141656847_141658364_141658480_141658578_141658654_141659407_141659477_141659778_141659927_141661683_141661790_141662102_141662256_141664921_141665086_141665310_141665375_141666423_141666644_141669708_141669812_141669921_141670064_141670511_141670629_141671264_141671401_141671569_141671753_141671894_141671981_141672101_141672302_141672551_141672659_141672740_141672926_141673012_141673134_141673400_141673471_141673604_141673809_141679544_141679657_141679760_141679823_141679962_141680472_141682172
transcript_163280.nic	chr5	-	5116	33	NIC	ENSG00000120318.16	novel	5258	33	NA	NA	-41	-145	combination_of_known_junctions	FALSE	canonical	3	71	junction_32	34.9890607904814	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCTGGGTGATGTTAAA	-141675894	True	NA	-1	True	ATTAAA	-24	NA	141682271	141653552	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_141654436_141655361_141655401_141655620_141655759_141655868_141655933_141656063_141656100_141656193_141656277_141656503_141656638_141656717_141656847_141658364_141658480_141658578_141658654_141659407_141659477_141659778_141659927_141661683_141661790_141662042_141662256_141664921_141665086_141665310_141665375_141666423_141666644_141669708_141669812_141669921_141670064_141670511_141670629_141671264_141671401_141671569_141671753_141671894_141671981_141672101_141672302_141672551_141672659_141672740_141672926_141673012_141673134_141673400_141673471_141673604_141673809_141679544_141679657_141679760_141679823_141679962_141680472_141682172
transcript_16329.known	chr1	+	1485	7	FSM	ENSG00000158793.14	ENST00000368009.7	1485	7	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	23.4852199384114	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCATGTCCCAGCCCCATT	161115410	True	NA	4	True	AATAAA	-14	NA	161118104	161121194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161118179_161118785_161118882_161119133_161119389_161119508_161119613_161119818_161119953_161120106_161120233_161120498
transcript_16330.known	chr1	+	2081	7	FSM	ENSG00000158793.14	ENST00000368008.5	2081	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_6	76.4324320342266	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTCTTGTAATTCTATGC	161115423	True	NA	NA	False	AATAAA	-20	NA	161118117	161125445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161118179_161118785_161118882_161119133_161119389_161119508_161119613_161119818_161119953_161120106_161120233_161124140
transcript_163311.known	chr5	-	4814	5	FSM	ENSG00000156453.14	ENST00000287008.8	4814	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	166.560799709896	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTGCGCTGTGCCCTGGG	-141864001	True	NA	1	True	AATACA	-20	NA	141878410	141853089	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_141854437_141857251_141857472_141863231_141865428_141868568_141869432_141878222
transcript_163321.known	chr5	-	3827	3	FSM	ENSG00000156453.14	ENST00000394536.4	3827	3	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_1	4.5	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGTTTCTTATTTTCT	-141864001	True	NA	-3	True	AATAAA	-17	NA	141878410	141862651	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_141865428_141868568_141869432_141878222
transcript_163322.nnic	chr5	-	3768	3	NNC	ENSG00000156453.14	novel	3827	3	NA	NA	376	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	182.5	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGTTTCTTATTTTCT	-141878633	True	NA	-3	True	AATAAA	-17	NA	141878870	141862651	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_141865428_141868568_141869432_141878741
transcript_163324.nic	chr5	-	3924	3	NIC	ENSG00000156453.14	novel	3827	3	NA	NA	-32	-2	combination_of_known_junctions	FALSE	canonical	2	31	junction_1	184	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTTTGGTTTCTTATTTT	-141864033	True	NA	-5	True	AATAAA	-15	NA	141878442	141862653	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_141865428_141868501_141869432_141878222
transcript_16333.nnic	chr1	+	1337	7	NNC	ENSG00000158793.14	novel	1485	7	NA	NA	7	-129	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	81.9186588431883	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGTCTGGACATCGCC	161115398	True	NA	11	True	CATAAA	-1	NA	161118092	161121064	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_161118179_161118815_161118882_161119133_161119389_161119508_161119613_161119818_161119953_161120106_161120233_161120498
transcript_163332.nnic	chr5	+	2397	14	NNC	ENSG00000081791.9	novel	2203	13	NA	NA	-67	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_13	68.6132286656807	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCATCACTCTTGCCCTT	141917809	True	NA	6	True	AATAAA	-15	NA	141923787	141940146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493_141934587_141937197_141937358_141938520_141938761_141938851_141938905_141939505
transcript_163333.nnic	chr5	+	2352	14	NNC	ENSG00000081791.9	novel	2203	13	NA	NA	-67	3	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_13	72.2951707652477	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCACTCTTGCCCTTGAG	141917809	True	NA	9	True	AATAAA	-18	NA	141923787	141940149	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493_141934587_141937197_141937358_141938520_141938761_141938851_141938905_141939553
transcript_163338.nnic	chr5	+	2347	13	NIC	ENSG00000081791.9	novel	2203	13	NA	NA	-67	3	combination_of_known_splicesites	FALSE	canonical	3	38	junction_12	53.9665534279232	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCACTCTTGCCCTTGAG	141917809	True	NA	9	True	AATAAA	-18	NA	141923787	141940149	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493_141934587_141937197_141937358_141938520_141938761_141939505
transcript_163339.known	chr5	+	2203	13	FSM	ENSG00000081791.9	ENST00000194118.8	2203	13	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_12	58.9693894227241	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGTTTAATAAAACAGATAT	141917876	True	NA	-20	True	NA	NA	NA	141923854	141940120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493_141934587_141937197_141937358_141938520_141938761_141939553
transcript_163346.known	chr5	+	4907	12	FSM	ENSG00000081791.9	ENST00000432126.7	4907	12	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_11	25.0543211495435	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTCTGATCATGTC	141917892	True	NA	26	True	AATAAA	-19	NA	141923870	141942047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493_141934587_141937197_141937358_141938520
transcript_16336.nic	chr1	+	1420	7	NIC	ENSG00000158793.14	novel	1518	7	NA	NA	-4	-129	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	82.6552411459122	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGTCTGGACATCGCC	161115406	True	NA	11	True	CATAAA	-1	NA	161118100	161121064	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_161118240_161118785_161118882_161119133_161119389_161119508_161119613_161119818_161119953_161120106_161120233_161120498
transcript_163361.nic	chr5	+	2197	10	ISM	ENSG00000081791.9	ENST00000194118.8	2203	13	-67	4640	-67	484	5prime_fragment	FALSE	canonical	3	193	junction_9	16.2351546624472	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCTCCCTACATAGGGGA	141917809	True	NA	8	True	ATTAAA	-24	NA	141923787	141935480	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493
transcript_163367.nic	chr5	+	1823	8	ISM	ENSG00000081791.9	ENST00000508751.1	998	9	-122	153	-67	-153	5prime_fragment	FALSE	canonical	3	218	junction_6	9.82292196438348	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCACTGAGTGCAAAAGAT	141917809	True	NA	NA	False	ATTAAA	-15	NA	141923787	141934173	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258
transcript_163369.known	chr5	+	4170	9	FSM	ENSG00000013561.18	ENST00000394520.7	4170	9	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	25.2830847603689	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAATTTCATGAAAGCCTT	141967431	True	NA	9	True	AATAAA	-16	NA	141969104	141990292	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141969168_141970703_141970878_141973582_141973743_141974803_141974956_141978302_141978831_141980122_141980352_141983379_141983553_141984802_141984934_141987732
transcript_163371.nic	chr5	+	1925	9	NIC	ENSG00000013561.18	novel	4170	9	NA	NA	4	-1149	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	39.7317174937102	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAATGTGCCCAAAGCTC	141967487	True	NA	6	True	ATTAAA	-18	NA	141969160	141988036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_141969235_141970703_141970878_141973582_141973743_141974803_141974956_141978302_141978831_141980122_141980352_141983379_141983553_141984802_141984934_141987732
transcript_163372.nic	chr5	+	3074	9	NIC	ENSG00000013561.18	novel	4170	9	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	39.7317174937102	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACAGAGTTGCTGCTATT	141967487	True	NA	19	True	AATAAA	-28	NA	141969160	141989185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_141969235_141970703_141970878_141973582_141973743_141974803_141974956_141978302_141978831_141980122_141980352_141983379_141983553_141984802_141984934_141987732
transcript_163378.known	chr5	+	2905	8	FSM	ENSG00000013561.18	ENST00000394514.6	2905	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	40.7816485339038	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACAGAGTTGCTGCTATT	141967437	True	NA	19	True	AATAAA	-28	NA	141969110	141989185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141969168_141970703_141970878_141973582_141973743_141978302_141978831_141980122_141980352_141983379_141983553_141984802_141984934_141987732
transcript_163380.known	chr5	+	4213	8	FSM	ENSG00000013561.18	ENST00000347642.7	4213	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	45.4245281219524	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTAATTTCATGAAAGCC	NA	False	NA	7	True	AATAAA	-14	NA	141968885	141990290	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_141969168_141973582_141973743_141974803_141974956_141978302_141978831_141980122_141980352_141983379_141983553_141984802_141984934_141987732
transcript_163388.known	chr5	-	5706	4	FSM	ENSG00000113555.6	ENST00000231484.4	5706	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGAGCTCCAGGTAGGA	NA	False	NA	NA	False	AATAAA	-37	NA	141958202	141943580	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_141945806_141949431_141949584_141951492_141951591_141954971
transcript_163391.known	chr5	-	2319	8	FSM	ENSG00000113552.16	ENST00000500692.6	2319	8	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_7	266.40991891812	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATGTCATTTGTGGATT	-142003211	True	NA	-17	True	ATTAAA	-16	NA	142013030	142000673	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_142002130_142003087_142003263_142004931_142005117_142006143_142006327_142007798_142007901_142011911_142012042_142012287_142012340_142012994
transcript_163395.known	chr5	-	754	7	FSM	ENSG00000113552.16	ENST00000504139.5	754	7	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	232.675501264935	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATCAAAGAGAAAGAAACTGA	-142003212	True	NA	NA	False	NA	NA	NA	142013031	142002085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_142002130_142003087_142003215_142004985_142005117_142006143_142006327_142007798_142007901_142011911_142012042_142012994
transcript_163398.known	chr5	-	2267	7	FSM	ENSG00000113552.16	ENST00000311337.11	2267	7	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_6	91.5649435585961	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCATTTGTGGATTTGA	-142003208	True	NA	-14	True	ATTAAA	-19	NA	142013027	142000670	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_142002130_142003087_142003263_142004931_142005117_142006143_142006327_142007798_142007901_142011911_142012042_142012994
transcript_163402.known	chr5	+	3574	8	FSM	ENSG00000131507.11	ENST00000253814.6	3574	8	0	0	0	0	multi-exon	TRUE	canonical	3	463	junction_7	33.2000737643636	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAATGAATATCTTTACT	142094779	True	NA	NA	False	AATAAA	-34	NA	142108778	142154440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_142109038_142131807_142131896_142132211_142132343_142135729_142135818_142137733_142137859_142140562_142140630_142144570_142144677_142151730
transcript_163409.known	chr5	-	4938	3	FSM	ENSG00000187678.10	ENST00000344120.4	4938	3	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_2	0.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGTGTTTGTGTGTTT	-142312927	True	NA	-1	True	TATAAA	-34	NA	142325001	142310426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_142315156_142319743_142319795_142324843
transcript_163412.known	chr5	-	4904	2	FSM	ENSG00000187678.10	ENST00000434127.3	4904	2	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTGGTGTGTTTGTGTG	-142312947	True	NA	-4	True	TATAAA	-31	NA	142325021	142310429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_142315156_142324843
transcript_163424.known	chr5	+	9226	23	FSM	ENSG00000145819.18	ENST00000645722.2	9226	23	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_21	11.1751643173898	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTGAGTTTCTGATAG	142767612	True	NA	14	True	ATTAAA	-22	NA	142770376	143229007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_142770916_142873399_142873496_142875109_142875172_142879373_142879446_142885297_142885400_142894237_142894349_142901934_142902040_142903539_142903670_142907703_142907805_142913198_142913294_142932046_142932126_143014079_143014117_143037195_143037262_143041815_143041891_143054438_143054527_143056027_143056087_143057641_143057748_143120987_143121148_143133966_143134106_143147230_143147382_143207197_143207309_143213996_143214089_143222357
transcript_163426.known	chr5	+	9395	23	FSM	ENSG00000145819.18	ENST00000274498.9	9395	23	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_21	12.1529508711273	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGTTTCTGATAGAGTT	142767612	True	NA	18	True	ATTAAA	-26	NA	142770376	143229011	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_142770916_142873399_142873496_142875109_142875172_142879373_142879446_142885297_142885400_142894237_142894349_142901934_142902040_142903539_142903670_142907703_142907805_142913198_142913294_142932046_142932126_143014079_143014117_143037195_143037262_143041815_143041891_143054438_143054527_143056027_143056087_143057641_143057748_143120987_143121148_143133966_143134106_143147230_143147382_143207197_143207474_143213996_143214089_143222357
transcript_163431.known	chr5	-	3556	9	FSM	ENSG00000113580.15	ENST00000231509.7	3556	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	8.45484328654293	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAATCTCCAGTATTCT	-143403513	False	NA	NA	False	NA	NA	NA	143403689	143281161	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_143282042_143282567_143282726_143295459_143295591_143298667_143298813_143300484_143300764_143310096_143310214_143313998_143314169_143399655_143400853_143403210
transcript_163432.known	chr5	-	2594	9	FSM	ENSG00000113580.15	ENST00000503201.1	2594	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_8	5.66651347832157	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTTTGTTGTTTTATTT	-143404368	True	NA	NA	False	TATAAA	-19	NA	143404544	143281810	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_143282042_143282567_143282726_143295459_143295591_143298667_143298813_143300484_143300764_143310096_143310214_143314001_143314169_143399655_143400853_143404375
transcript_163433.nic	chr5	-	2228	4	ISM	ENSG00000113580.15	ENST00000394464.7	6778	9	-271	32163	-75	-9536	5prime_fragment	FALSE	canonical	2	8	junction_3	5.43650214343336	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAATATAAATATCTGAAAG	-143403781	False	NA	NA	False	AATGAA	-9	NA	143403957	143310096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_143310214_143314001_143314169_143399655_143400853_143403210
transcript_163434.nic	chr5	-	1703	4	ISM	ENSG00000113580.15	ENST00000503201.1	2594	9	-53	28286	-53	-9536	5prime_fragment	FALSE	canonical	2	8	junction_3	5.43650214343336	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAATATAAATATCTGAAAG	NA	False	NA	NA	False	AATGAA	-9	NA	143404597	143310096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_143310214_143314001_143314169_143399655_143400853_143404375
transcript_163435.known	chr5	-	2255	6	FSM	ENSG00000145817.17	ENST00000448443.6	2255	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	107.38826751559	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAACTGTGTTATTGAAT	-144165973	True	NA	-4	True	ATTAAA	-15	NA	144170630	144159272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_144160560_144162217_144162400_144164110_144164257_144165431_144165605_144169845_144169966_144170283
transcript_163436.known	chr5	-	3144	6	FSM	ENSG00000145817.17	ENST00000274496.10	3144	6	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_2	25.0519460321948	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTATGTGGCGCTTTTTT	-144166002	True	NA	-3	True	ATTAAA	-25	NA	144170659	144158161	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_144160560_144162217_144162400_144164110_144164257_144165431_144165605_144169845_144169966_144170534
transcript_163444.nic	chr5	-	1282	3	ISM	ENSG00000145817.17	ENST00000508754.1	793	4	-12	698	7	-698	5prime_fragment	FALSE	canonical	3	297	junction_1	5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATTAGCTCTGTGTT	-144165995	True	NA	NA	False	AAAAAG	-14	NA	144170652	144164560	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_144165605_144169845_144169966_144170534
transcript_163445.known	chr5	-	793	4	FSM	ENSG00000145817.17	ENST00000508754.1	793	4	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_1	16.9967317119759	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTAAACAACAGGTATAGC	-144165983	True	NA	NA	False	ATTAAA	-28	NA	144170640	144163862	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_144164257_144165431_144165605_144169845_144169966_144170534
transcript_163450.known	chr5	-	1102	8	FSM	ENSG00000186314.12	ENST00000394450.6	1102	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_6	18.8484828599664	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCATGTAAGATATGTGT	-145833822	True	NA	-12	True	AATAAA	-9	NA	145835336	145760255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_145760526_145764930_145765001_145796441_145796548_145817893_145818055_145819944_145820019_145823076_145823135_145825997_145826201_145835176
transcript_163451.known	chr5	-	2140	8	FSM	ENSG00000186314.12	ENST00000334744.8	2140	8	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_5	27.1593934590083	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-145833790	True	NA	NA	False	NA	NA	NA	145835304	145759018	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_145760526_145764930_145765001_145796441_145796548_145817893_145818055_145819378_145819415_145819944_145820019_145823076_145823135_145835176
transcript_163454.known	chr5	-	4817	7	FSM	ENSG00000186314.12	ENST00000683046.1	4817	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_6	7.81913607049327	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATGTGTGCATTCTAA	-145833828	True	NA	-1	True	AATAAA	-15	NA	145835342	145756343	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_145760526_145764930_145765001_145796441_145796548_145817893_145818055_145819944_145820019_145823076_145823135_145835176
transcript_163460.known	chr5	+	3004	10	FSM	ENSG00000156463.18	ENST00000359120.9	3004	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.49071198499986	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCCTGAGTATGCTCCAC	145936502	True	NA	2	True	AATAAA	-15	NA	145936577	146063292	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_145936695_145937822_145938307_146000057_146000328_146004057_146004154_146013746_146014062_146047771_146047864_146049074_146049246_146055980_146056214_146059865_146060225_146062425
transcript_163466.known	chr5	-	7331	32	FSM	ENSG00000133706.19	ENST00000674170.1	7331	32	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_17	315.823025035477	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTAAGTATCTATTTTTA	NA	False	NA	-46	True	NA	NA	NA	146182683	146110565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_146114312_146120370_146120504_146122491_146122588_146123981_146124087_146126434_146126546_146128671_146128783_146128977_146129119_146130017_146130159_146131018_146131110_146132897_146133082_146135600_146135665_146140203_146140262_146142871_146143085_146143411_146143551_146144266_146144350_146144471_146144538_146144623_146144710_146149551_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182487
transcript_163467.known	chr5	-	4768	32	FSM	ENSG00000133706.19	ENST00000674398.1	4768	32	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_6	303.179145346009	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTATTACAGATTTATTC	-146160856	True	NA	-30	True	AATAAA	-14	NA	146182670	146113042	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_146114312_146120370_146120504_146122491_146122588_146123981_146124087_146126434_146126546_146128671_146128780_146128977_146129119_146130017_146130159_146131018_146131110_146132897_146133082_146135600_146135665_146140203_146140262_146142871_146143085_146143411_146143551_146144266_146144350_146144471_146144538_146144623_146144710_146149621_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182487
transcript_163468.known	chr5	-	4669	32	FSM	ENSG00000133706.19	ENST00000674277.1	4669	32	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_31	393.010219024982	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTATTACAGATTTATTC	-146160831	True	NA	-30	True	AATAAA	-14	NA	146182645	146113042	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_146114312_146120370_146120504_146122491_146122588_146123981_146124087_146126434_146126546_146128671_146128780_146128977_146129119_146130017_146130159_146131018_146131110_146132897_146133082_146135600_146135665_146140203_146140262_146142871_146143085_146143411_146143551_146144266_146144350_146144471_146144538_146144623_146144710_146149621_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182561
transcript_163473.known	chr5	-	7140	32	FSM	ENSG00000133706.19	ENST00000674174.1	7140	32	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_31	315.329377040855	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTAAGTATCTATTTTTA	NA	False	NA	-46	True	NA	NA	NA	146182696	146110565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_146114312_146120370_146120504_146122491_146122588_146123981_146124087_146126434_146126546_146128671_146128783_146128977_146129119_146130017_146130159_146131018_146131110_146132897_146133082_146135600_146135665_146140203_146140262_146142871_146143085_146143411_146143551_146144266_146144350_146144471_146144538_146144623_146144710_146149621_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182621
transcript_163477.known	chr5	-	7090	31	FSM	ENSG00000133706.19	ENST00000674270.1	7090	31	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_27	307.093007988713	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTAAGTATCTATTTTTA	-146160836	True	NA	-46	True	NA	NA	NA	146182650	146110565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_146114312_146120370_146120504_146122491_146122588_146123981_146124087_146126434_146126546_146128671_146128783_146128977_146129119_146130017_146130159_146131018_146131110_146132897_146133082_146135600_146135665_146140203_146140262_146142871_146143085_146143411_146143551_146144266_146144350_146144471_146144538_146144623_146144710_146149621_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146171909_146171991_146172686_146172775_146177546_146177666_146182487
transcript_163489.nic	chr5	-	3129	28	ISM	ENSG00000133706.19	ENST00000674310.1	3647	33	0	12241	0	-2495	5prime_fragment	FALSE	canonical	3	1217	junction_15	128.800331432916	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATGAAGAAAGTCATGCC	-146160856	True	NA	NA	False	AAGAAA	-1	NA	146182670	146126473	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_146126546_146128671_146128783_146128977_146129119_146130017_146130159_146131018_146131110_146132897_146133082_146135600_146135665_146140203_146140262_146142871_146143085_146143411_146143551_146144266_146144350_146144471_146144538_146144623_146144710_146149621_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182487
transcript_1635.known	chr1	-	1998	11	FSM	ENSG00000116213.16	ENST00000378322.7	1998	11	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_5	31.090995481007	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCTTCTTGAAACGTTT	-3646678	True	NA	1	True	AATAAA	-23	NA	3650058	3630766	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3631658_3632212_3632339_3633397_3633504_3634996_3635075_3635159_3635295_3635943_3636031_3636994_3637099_3638749_3638823_3646665_3646783_3647407_3647561_3649930
transcript_163505.known	chr5	-	4783	15	FSM	ENSG00000133706.19	ENST00000674417.1	4783	15	0	0	0	0	multi-exon	FALSE	canonical	3	1217	junction_2	92.0655545061811	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATATGGGGTTCTAACCT	-146160849	True	NA	NA	False	NA	NA	NA	146182663	146146511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182487
transcript_163507.nic	chr5	-	870	7	ISM	ENSG00000133706.19	ENST00000618084.2	1954	14	-12	8890	-2	2138	5prime_fragment	FALSE	canonical	3	1272	junction_2	94.7376494442533	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATTTGGGAAGCGGTAA	-146160858	True	NA	19	True	AAGAAA	-6	NA	146182672	146160389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182487
transcript_163512.nic	chr5	-	610	5	ISM	ENSG00000133706.19	ENST00000505223.6	2533	6	-22	5601	-2	-5601	5prime_fragment	FALSE	canonical	3	1285	junction_3	92.5499864937862	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTGATAGTGGTTGATAT	-146160858	True	NA	NA	False	GATAAA	-15	NA	146182672	146168128	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182487
transcript_163513.nic	chr5	-	495	5	ISM	ENSG00000133706.19	ENST00000505223.6	2533	6	-22	5716	-2	-5716	5prime_fragment	FALSE	canonical	3	1285	junction_3	92.5499864937862	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAATAGAGCTGTATGGT	-146160858	True	NA	NA	False	NA	NA	NA	146182672	146168243	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182487
transcript_163515.nic	chr5	-	478	4	ISM	ENSG00000133706.19	ENST00000505223.6	2533	6	-81	9436	-35	-9436	5prime_fragment	FALSE	canonical	3	1285	junction_2	104.979363051348	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAATGTTGTCTGTTTCC	NA	False	NA	NA	False	NA	NA	NA	146182731	146171963	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_146171991_146172686_146172775_146177546_146177666_146182487
transcript_163516.known	chr5	+	3311	20	FSM	ENSG00000275740.1	ENST00000506502.2	3311	20	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_18	18.7248631133837	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCGCTCTAAGGCACATTT	146193145	True	NA	NA	False	NA	NA	NA	146203549	146339251	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_146203825_146218984_146219104_146223402_146223528_146228945_146229038_146229716_146229911_146230656_146230918_146233449_146233744_146237297_146237433_146254942_146255093_146258448_146258594_146260744_146260899_146261509_146261807_146263490_146263632_146267648_146267769_146269206_146269282_146269419_146269585_146270953_146271059_146271482_146271675_146314895_146315019_146339102
transcript_163531.known	chr5	+	6537	21	FSM	ENSG00000091009.8	ENST00000265271.7	6537	21	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_9	8.41070746132571	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGTAATTCTGGCTTGT	146193200	True	NA	17	True	NA	NA	NA	146203604	146289223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_146203825_146218984_146219104_146223402_146223528_146228945_146229038_146229716_146229911_146230656_146230918_146233449_146233744_146237297_146237433_146251710_146251876_146254942_146255093_146258448_146258594_146260744_146260899_146261509_146261807_146263490_146263632_146267648_146267769_146269206_146269282_146269419_146269585_146270953_146271059_146271482_146271675_146284621_146284733_146285946
transcript_163538.nic	chr5	+	2764	17	ISM	ENSG00000091009.8	ENST00000265271.7	6537	21	-45	19772	-45	5932	5prime_fragment	FALSE	canonical	3	37	junction_9	6.89202437604511	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATGAAACCAGAAGAAAGAG	146193155	True	NA	21	True	AAAACA	-5	NA	146203559	146269451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_146203825_146218984_146219104_146223402_146223528_146228945_146229038_146229716_146229911_146230656_146230918_146233449_146233744_146237297_146237433_146251710_146251876_146254942_146255093_146258448_146258594_146260744_146260899_146261509_146261807_146263490_146263632_146267648_146267769_146269206_146269282_146269419
transcript_163540.nic	chr5	+	2732	16	ISM	ENSG00000091009.8	ENST00000265271.7	6537	21	-45	19942	-45	5762	5prime_fragment	FALSE	canonical	3	37	junction_9	7.03767638421154	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGACAAGAGCTCATTAT	146193155	True	NA	62	True	AATAGA	-11	NA	146203559	146269281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_146203825_146218984_146219104_146223402_146223528_146228945_146229038_146229716_146229911_146230656_146230918_146233449_146233744_146237297_146237433_146251710_146251876_146254942_146255093_146258448_146258594_146260744_146260899_146261509_146261807_146263490_146263632_146267648_146267769_146269206
transcript_163544.nic	chr5	+	2009	12	ISM	ENSG00000091009.8	ENST00000265271.7	6537	21	-45	28415	-45	-2711	5prime_fragment	FALSE	canonical	3	37	junction_9	7.68060775832161	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGAAGTCAAGAAAATCCC	146193155	True	NA	5	True	AATAAA	-40	NA	146203559	146260808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_146203825_146218984_146219104_146223402_146223528_146228945_146229038_146229716_146229911_146230656_146230918_146233449_146233744_146237297_146237433_146251710_146251876_146254942_146255093_146258448_146258594_146260744
transcript_163545.known	chr5	+	2575	2	FSM	ENSG00000091010.6	ENST00000646991.2	2575	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGTGGTTTTATTTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	146338838	146341728	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_146339233_146339547
transcript_163547.known	chr5	+	4684	23	FSM	ENSG00000113649.13	ENST00000679501.2	4684	23	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_13	241.690213063974	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATGTTAATAGAATAA	146430947	True	NA	NA	False	AATAAA	-14	NA	146447332	146511961	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_146447409_146455055_146455282_146457182_146457336_146458883_146459338_146463550_146463794_146468340_146468404_146469543_146469745_146470635_146470749_146471487_146471577_146478492_146478654_146479854_146479912_146480027_146480095_146481149_146481201_146482591_146482728_146483539_146483630_146492919_146493039_146498535_146498687_146503374_146503540_146503823_146504007_146507027_146507208_146507872_146507957_146509144_146509246_146510440
transcript_163548.known	chr5	+	3518	23	FSM	ENSG00000113649.13	ENST00000549332.1	3518	23	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_21	233.07009994335	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGTGAACAGTTTCTGAA	146430960	True	NA	NA	False	NA	NA	NA	146447345	146510765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_146447409_146455055_146455282_146457182_146457336_146458883_146459338_146463550_146463794_146468340_146468404_146469543_146469745_146470635_146470749_146471487_146471577_146478492_146478654_146479854_146479912_146480027_146480095_146482591_146482728_146483539_146483630_146492919_146493039_146498535_146498687_146503374_146503540_146503823_146504007_146507027_146507208_146507872_146507957_146509144_146509246_146510066_146510161_146510440
transcript_16355.known	chr1	+	1749	6	FSM	ENSG00000158793.14	ENST00000368007.8	1749	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	89.9444272870754	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCATGTCCCAGCCCCAT	161115422	True	NA	3	True	AATAAA	-13	NA	161118116	161121193	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161118552_161119133_161119389_161119508_161119613_161119818_161119953_161120106_161120233_161120498
transcript_163553.known	chr5	+	4654	22	FSM	ENSG00000113649.13	ENST00000296702.9	4654	22	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_6	182.886356793321	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATGTTAATAGAATAA	146430926	True	NA	NA	False	AATAAA	-14	NA	146447311	146511961	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_146447409_146455055_146455282_146457182_146457336_146458883_146459338_146463550_146463794_146468340_146468404_146469543_146469745_146470635_146470749_146471487_146471577_146478492_146478654_146479854_146479912_146480027_146480095_146482591_146482728_146483539_146483630_146492919_146493039_146498535_146498687_146503374_146503540_146503823_146504007_146507027_146507208_146507872_146507957_146509144_146509246_146510440
transcript_163558.known	chr5	+	3632	21	FSM	ENSG00000113649.13	ENST00000394421.7	3632	21	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_5	120.109325200003	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGGGGTTTGTTTTGTTT	146430947	True	NA	NA	False	AAGAAA	-6	NA	146447332	146511023	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_146447409_146455055_146455282_146457182_146457336_146458883_146459338_146463550_146463794_146469543_146469745_146470635_146470749_146471487_146471577_146478492_146478654_146479854_146479912_146480027_146480095_146482591_146482728_146483539_146483630_146492919_146493039_146498535_146498687_146503374_146503540_146503823_146504007_146507027_146507208_146507872_146507957_146509144_146509246_146510440
transcript_163574.nic	chr5	+	2916	19	ISM	ENSG00000113649.13	ENST00000394421.7	3632	21	-15	3114	6	561	5prime_fragment	FALSE	canonical	3	462	junction_5	120.489536454672	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTAAGGAAGATCCTCGA	146430932	True	NA	-37	True	AGTAAA	-6	NA	146447317	146507909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_146447409_146455055_146455282_146457182_146457336_146458883_146459338_146463550_146463794_146469543_146469745_146470635_146470749_146471487_146471577_146478492_146478654_146479854_146479912_146480027_146480095_146482591_146482728_146483539_146483630_146492919_146493039_146498535_146498687_146503374_146503540_146503823_146504007_146507027_146507208_146507872
transcript_163579.nic	chr5	+	2609	18	ISM	ENSG00000113649.13	ENST00000549332.1	3518	23	-35	6919	0	307	5prime_fragment	FALSE	canonical	3	199	junction_6	175.018021810548	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTTGAAAGGCAAGCCC	146430925	True	NA	NA	False	AAAAAG	-5	NA	146447310	146503846	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_146447409_146455055_146455282_146457182_146457336_146458883_146459338_146463550_146463794_146468340_146468404_146469543_146469745_146470635_146470749_146471487_146471577_146478492_146478654_146479854_146479912_146480027_146480095_146482591_146482728_146483539_146483630_146492919_146493039_146498535_146498687_146503374_146503540_146503823
transcript_16358.known	chr1	-	954	6	FSM	ENSG00000158796.17	ENST00000463227.5	954	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	126.214103807776	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTCTGGCGTGACTACAT	-161132445	False	NA	NA	False	NA	NA	NA	161132476	161122332	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_161122524_161123074_161123222_161123838_161123947_161124137_161124527_161130814_161130848_161132390
transcript_16359.known	chr1	-	1527	6	FSM	ENSG00000158796.17	ENST00000490843.6	1527	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	136.331067625835	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTTATGAGAGCTCTTAA	-161129745	True	NA	NA	False	NA	NA	NA	161132667	161121786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_161122524_161123074_161123222_161123838_161123947_161124137_161124527_161130814_161130844_161132550
transcript_163609.nic	chr5	+	2534	16	ISM	ENSG00000113649.13	ENST00000394421.7	3632	21	-33	7484	-11	0	5prime_fragment	FALSE	canonical	3	462	junction_5	88.8022522236908	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACTGTTGTGTTTACTTG	146430914	True	NA	4	True	NA	NA	NA	146447299	146503539	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_146447409_146455055_146455282_146457182_146457336_146458883_146459338_146463550_146463794_146469543_146469745_146470635_146470749_146471487_146471577_146478492_146478654_146479854_146479912_146480027_146480095_146482591_146482728_146483539_146483630_146492919_146493039_146498535_146498687_146503374
transcript_163616.nic	chr5	+	2185	15	NIC	ENSG00000113649.13	novel	4684	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	100	junction_12	213.670306781265	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAATAAAATAATG	146430925	True	NA	-10	True	NA	NA	NA	146447310	146492965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_146447409_146455055_146455282_146457182_146457336_146458883_146459338_146463550_146463794_146469543_146469745_146470635_146470749_146471487_146471577_146478492_146478654_146479854_146479912_146480027_146480095_146481149_146481201_146482591_146482728_146483539_146483630_146492919
transcript_163617.nic	chr5	+	2506	15	ISM	ENSG00000113649.13	ENST00000394421.7	3632	21	-203	12370	-181	-4886	5prime_fragment	FALSE	canonical	3	462	junction_5	89.9965985751797	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAAGAAGATTCGAAGAC	146447061	True	NA	77	True	AAGAAA	-1	NA	146447129	146498653	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_146447409_146455055_146455282_146457182_146457336_146458883_146459338_146463550_146463794_146469543_146469745_146470635_146470749_146471487_146471577_146478492_146478654_146479854_146479912_146480027_146480095_146482591_146482728_146483539_146483630_146492919_146493039_146498535
transcript_163622.nic	chr5	+	2134	14	ISM	ENSG00000113649.13	ENST00000394421.7	3632	21	-22	18058	0	0	5prime_fragment	FALSE	canonical	3	462	junction_5	92.6609905602009	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAATAAAATAATG	146430925	True	NA	-10	True	NA	NA	NA	146447310	146492965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_146447409_146455055_146455282_146457182_146457336_146458883_146459338_146463550_146463794_146469543_146469745_146470635_146470749_146471487_146471577_146478492_146478654_146479854_146479912_146480027_146480095_146482591_146482728_146483539_146483630_146492919
transcript_163635.known	chr5	+	1984	11	FSM	ENSG00000113649.13	ENST00000507175.5	1984	11	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_5	85.5602711543155	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCTGATAATAAATAGCTT	146430925	True	NA	NA	False	NA	NA	NA	146447310	146480216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_146447409_146455055_146455282_146457182_146457336_146458883_146459338_146463550_146463794_146469543_146469745_146470635_146470749_146471487_146471577_146478492_146478654_146479854_146479912_146480027
transcript_163641.nic	chr5	+	1456	7	NIC	ENSG00000113649.13	novel	1984	11	NA	NA	-3	-66	combination_of_known_junctions	FALSE	canonical	3	35	junction_5	323.124159143544	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATATAGTGGTTTTAATG	146430922	True	NA	NA	False	ACTAAA	-8	NA	146447307	146469743	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_146447409_146455055_146455282_146457182_146457336_146458883_146459338_146462017_146462097_146463550_146463794_146469543
transcript_163642.nic	chr5	+	1440	7	ISM	ENSG00000113649.13	ENST00000549332.1	3518	23	-38	41022	-3	-66	5prime_fragment	FALSE	canonical	3	199	junction_6	248.581810812188	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATATAGTGGTTTTAATG	146430922	True	NA	NA	False	ACTAAA	-8	NA	146447307	146469743	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_146447409_146455055_146455282_146457182_146457336_146458883_146459338_146463550_146463794_146468340_146468404_146469543
transcript_163647.nic	chr5	+	1555	6	ISM	ENSG00000113649.13	ENST00000507175.5	1984	11	-181	10473	-181	-66	5prime_fragment	FALSE	canonical	3	462	junction_5	117.642849336456	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATATAGTGGTTTTAATG	146447061	True	NA	NA	False	ACTAAA	-8	NA	146447129	146469743	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_146447409_146455055_146455282_146457182_146457336_146458883_146459338_146463550_146463794_146469543
transcript_16365.nnic	chr1	-	2054	6	NNC	ENSG00000158796.17	novel	2344	6	NA	NA	62	-354	intron_retention	FALSE	canonical	2	13	junction_5	132.434738645115	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTTTCCCCTTTGCTTT	-161132357	False	2922	-1	True	AATAAA	-15	NA	161132388	161121330	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_161122524_161123074_161123222_161123838_161123947_161124137_161124527_161130814_161130848_161132204
transcript_163654.nic	chr5	-	2160	11	NIC	ENSG00000156475.19	novel	2569	10	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	62.3955126591648	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAAATTCTTCTTGTTTT	-146878763	False	NA	-12	True	AATAAA	-15	NA	146878773	146589510	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_146590227_146592970_146593063_146600290_146600461_146638250_146638416_146650546_146650725_146691127_146691241_146697978_146698145_146701044_146701143_146856498_146856584_146878001_146878196_146878590
transcript_163655.nic	chr5	-	2223	11	NIC	ENSG00000156475.19	novel	2093	10	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	2	25	junction_8	52.1237949500993	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAAATTCTTCTTGTTTT	-146878936	False	NA	-12	True	AATAAA	-15	NA	146878946	146589510	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_146590227_146592970_146593063_146600290_146600461_146638250_146638416_146650546_146650725_146691127_146691241_146697978_146698145_146701044_146701143_146856498_146856584_146878001_146878196_146878700
transcript_163658.known	chr5	-	10828	10	FSM	ENSG00000156475.19	ENST00000394411.9	10828	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	48.8648931010575	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTCTCTCTCTCTCTCTC	-146877806	True	NA	NA	False	AATAAA	-16	NA	146878757	146580741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_146590227_146592970_146593063_146600290_146600461_146638250_146638416_146650546_146650725_146691127_146691241_146697978_146698145_146701044_146701143_146878001_146878196_146878590
transcript_163659.known	chr5	-	2093	10	FSM	ENSG00000156475.19	ENST00000530902.5	2093	10	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_9	27.0860539944019	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCTTGTTTTGTGAAAA	-146878884	False	64	-5	True	AATAAA	-22	NA	146878894	146589503	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_146590227_146592970_146593063_146600290_146600461_146638250_146638416_146650546_146650725_146691127_146691241_146697978_146698145_146701044_146701143_146878001_146878196_146878700
transcript_163666.known	chr5	-	567	5	FSM	ENSG00000156475.19	ENST00000532154.5	567	5	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_2	41.7095612539859	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCAATAAAATAAGATGGCT	-146878775	False	NA	NA	False	AATAGA	-8	NA	146878785	146698039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_146698145_146701044_146701143_146856498_146856584_146878001_146878196_146878700
transcript_163667.nic	chr5	-	818	4	ISM	ENSG00000156475.19	ENST00000394411.9	10828	10	-254	117298	-117	0	5prime_fragment	FALSE	canonical	0	0	junction_3	57.1858568373529	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCAATAAAATAAGATGGCT	NA	False	NA	NA	False	AATAGA	-8	NA	146879011	146698039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_146698145_146701044_146701143_146878001_146878196_146878590
transcript_163668.nic	chr5	-	768	4	ISM	ENSG00000156475.19	ENST00000530902.5	2093	10	-177	108536	99	0	5prime_fragment	FALSE	canonical	3	79	junction_3	20.2155056000751	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCAATAAAATAAGATGGCT	NA	False	NA	NA	False	AATAGA	-8	NA	146879071	146698039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_146698145_146701044_146701143_146878001_146878196_146878700
transcript_163669.nic	chr5	+	1113	7	ISM	ENSG00000169302.16	ENST00000306304.10	2063	11	68	24476	5	288	5prime_fragment	FALSE	canonical	2	2	junction_6	1.06718737290547	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGTGCTTAGCACTG	147234871	True	NA	NA	False	AATAAA	-14	NA	147235030	147351440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_147235200_147239538_147239687_147278123_147278180_147279246_147279399_147323897_147324072_147343005_147343044_147351064
transcript_163677.known	chr5	-	5492	14	FSM	ENSG00000113657.13	ENST00000343218.10	5492	14	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_13	215.664680552634	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTCTCCAGTCTTCTT	-147509460	True	NA	-7	True	ATTAAA	-20	NA	147510068	147390807	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_147394124_147395558_147395722_147397665_147397846_147399081_147399253_147400691_147400834_147401539_147401697_147405609_147405731_147408727_147408797_147412607_147412689_147413595_147413658_147415708_147415874_147418446_147418632_147424874_147424964_147509477
transcript_163681.known	chr5	-	5309	14	FSM	ENSG00000113657.13	ENST00000398514.7	5309	14	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_13	113.023797043918	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACATTGTTCTCCAGTCTT	-147453914	False	NA	-10	True	ATTAAA	-17	NA	147453959	147390810	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_147394124_147395558_147395722_147397665_147397846_147399081_147399253_147400691_147400834_147401539_147401697_147405609_147405731_147408727_147408797_147412607_147412689_147413595_147413658_147415708_147415874_147418446_147418632_147424874_147424964_147453548
transcript_163689.known	chr5	-	9153	22	FSM	ENSG00000176049.16	ENST00000616793.5	9153	22	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	19.7081886131805	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATCTTTCATTGTTTAT	-147782034	True	NA	NA	False	AATAAA	-22	NA	147782728	147585437	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_147591687_147601740_147601812_147612305_147612372_147617910_147618115_147620665_147620744_147623620_147623690_147628750_147628817_147629692_147629747_147631412_147631512_147632679_147632779_147636221_147636285_147636964_147637049_147639631_147639761_147640703_147640824_147641707_147641765_147644057_147644199_147644849_147644997_147648375_147648475_147650337_147650548_147660947_147661446_147671677_147671955_147782455
transcript_163691.known	chr5	-	6001	21	FSM	ENSG00000176049.16	ENST00000265272.9	6001	21	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_15	11.2587743560301	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATCTCTCTATTATCCAT	-147782754	False	NA	NA	False	AATAAA	-20	NA	147782775	147588565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_147591687_147612305_147612372_147617910_147618115_147620665_147620744_147623620_147623690_147628750_147628817_147629692_147629747_147631412_147631512_147632679_147632779_147636221_147636285_147636964_147637049_147639631_147639761_147640703_147640824_147641707_147641765_147644057_147644199_147644849_147644997_147648375_147648475_147650337_147650548_147660947_147661446_147671677_147671955_147782455
transcript_163693.nic	chr5	-	2836	20	ISM	ENSG00000176049.16	ENST00000265272.9	6001	21	29	23755	-18	20358	5prime_fragment	FALSE	canonical	3	49	junction_14	10.8185743629435	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTTAGAAGAAAAGGTAGG	-147782722	True	NA	NA	False	AATAAA	-2	NA	147782746	147612320	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_147612372_147617910_147618115_147620665_147620744_147623620_147623690_147628750_147628817_147629692_147629747_147631412_147631512_147632679_147632779_147636221_147636285_147636964_147637049_147639631_147639761_147640703_147640824_147641707_147641765_147644057_147644199_147644849_147644997_147648375_147648475_147650337_147650548_147660947_147661446_147671677_147671955_147782455
transcript_163697.nic	chr5	-	1500	6	ISM	ENSG00000176049.16	ENST00000265272.9	6001	21	41	56294	-6	3516	5prime_fragment	FALSE	canonical	3	49	junction_3	8.1338797630651	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGAAATGGTGTGTATCA	-147782713	False	NA	-10	True	ACTAAA	-19	NA	147782734	147644859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_147644997_147648375_147648475_147650337_147650548_147660947_147661446_147671677_147671955_147782455
transcript_163698.nic	chr5	-	1278	5	ISM	ENSG00000176049.16	ENST00000265272.9	6001	21	47	59889	0	-79	5prime_fragment	FALSE	canonical	3	49	junction_2	8.40758586040012	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAATAGCTGAATTGAATG	-147782034	True	NA	-22	True	AAGAAA	-7	NA	147782728	147648454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_147648475_147650337_147650548_147660947_147661446_147671677_147671955_147782455
transcript_163706.nnic	chr5	+	973	5	NNC	ENSG00000164265.9	novel	672	3	NA	NA	-324	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_1	457.043419709769	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTCGTCCTATTTTT	147870335	False	NA	NA	False	AATAAA	-13	NA	147870357	147882191	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_147870755_147871616_147871680_147872176_147872322_147881445_147881649_147882026
transcript_163717.nnic	chr5	+	712	4	NNC	ENSG00000164265.9	novel	672	3	NA	NA	-126	0	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_1	464.128095345336	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTCGTCCTATTTTT	147870533	False	NA	NA	False	AATAAA	-13	NA	147870555	147882191	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_147870755_147872176_147872322_147881445_147881649_147882026
transcript_163720.nnic	chr5	+	1045	4	NNC	ENSG00000164265.9	novel	672	3	NA	NA	-350	0	at_least_one_novel_splicesite	FALSE	canonical	3	255	junction_1	393.35932117538	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTCGTCCTATTTTT	147871002	False	NA	NA	False	AATAAA	-13	NA	147871147	147882191	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_147871680_147872176_147872322_147881445_147881649_147882026
transcript_163724.known	chr5	+	440	3	FSM	ENSG00000164265.9	ENST00000504320.5	440	3	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	529.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCAGTCGTCCTATTTT	147869584	True	NA	NA	False	AATAAA	-12	NA	147870681	147882190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_147870755_147881445_147881649_147882026
transcript_163726.nnic	chr5	+	541	3	NNC	ENSG00000164265.9	novel	440	3	NA	NA	107	0	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_1	546	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTCGTCCTATTTTT	147869691	False	NA	NA	False	AATAAA	-13	NA	147870788	147882191	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_147870962_147881445_147881649_147882026
transcript_163727.known	chr5	+	549	3	FSM	ENSG00000164265.9	ENST00000507160.5	549	3	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	574	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCAGTCGTCCTATTTT	147871046	False	NA	NA	False	AATAAA	-12	NA	147871497	147882190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_147871680_147881445_147881649_147882026
transcript_163730.nnic	chr5	+	668	3	NNC	ENSG00000164265.9	novel	672	3	NA	NA	-199	0	at_least_one_novel_splicesite	FALSE	canonical	3	124	junction_1	546.5	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTCGTCCTATTTTT	147871556	False	NA	NA	False	AATAAA	-13	NA	147871818	147882191	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_147872119_147881445_147881649_147882026
transcript_163731.nnic	chr5	+	503	3	NNC	ENSG00000164265.9	novel	440	3	NA	NA	392	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	608.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTCGTCCTATTTTT	147867295	False	NA	NA	False	AATAAA	-13	NA	147872409	147882191	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_147872545_147881445_147881649_147882026
transcript_163735.known	chr5	+	672	3	FSM	ENSG00000164265.9	ENST00000514688.1	672	3	0	0	0	0	multi-exon	FALSE	canonical	3	783	junction_1	217	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTCGTCCTATTTTT	147871352	True	NA	NA	False	AATAAA	-13	NA	147872017	147882191	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_147872322_147881445_147881649_147882026
transcript_163744.known	chr5	+	4132	22	FSM	ENSG00000145868.17	ENST00000394370.7	4132	22	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_15	20.2944313933215	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGCCTTGGACCTGAA	148381884	True	NA	NA	False	AATAAA	-18	NA	148384001	148442836	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_148384040_148394713_148394905_148398998_148399133_148401981_148402146_148402347_148402514_148404684_148404823_148406256_148406395_148409123_148409218_148410634_148410766_148414135_148414307_148415927_148416071_148416993_148417205_148423997_148424118_148425521_148425702_148427212_148427723_148433423_148433525_148433634_148433738_148438331_148438499_148439646_148439793_148440423_148440528_148441123_148441238_148441968
transcript_163747.known	chr5	+	4401	22	FSM	ENSG00000145868.17	ENST00000340253.10	4401	22	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_14	14.8449278235419	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGCCTTGGACCTGAA	148381840	True	NA	NA	False	AATAAA	-18	NA	148383957	148442836	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_148384040_148394713_148394905_148398998_148399133_148401981_148402146_148402347_148402514_148404684_148404823_148406256_148406395_148409123_148409218_148410634_148410766_148414135_148414307_148415927_148416071_148416993_148417205_148423997_148424118_148425521_148425702_148427212_148427948_148433423_148433525_148433634_148433738_148438331_148438499_148439646_148439793_148440423_148440528_148441123_148441238_148441968
transcript_163751.known	chr5	+	3680	21	FSM	ENSG00000145868.17	ENST00000296701.10	3680	21	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_14	21.5172024203891	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACTTTTCTCTTGCCTT	148381817	True	NA	NA	False	AATAAA	-9	NA	148383934	148442827	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_148384040_148394713_148394905_148398998_148399133_148401981_148402146_148402347_148402514_148404684_148404823_148406256_148406395_148409123_148409218_148410634_148410766_148414135_148414307_148415927_148416071_148416993_148417205_148423997_148424118_148425521_148425702_148433423_148433525_148433634_148433738_148438331_148438499_148439646_148439793_148440423_148440528_148441123_148441238_148441968
transcript_163755.known	chr5	+	2013	1	FSM	ENSG00000169252.6	ENST00000305988.6	2013	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCATTGCACCTGTTTCT	148826542	True	NA	21	True	AATAAA	-14	NA	148826610	148828623	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_148826600_148828600
transcript_163758.known	chr5	+	6024	19	FSM	ENSG00000157510.14	ENST00000296721.9	6024	19	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_13	8.27013069596818	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGCTGGACACAGTTACT	149271165	True	NA	NA	False	AATAAA	-18	NA	149271858	149343637	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_149271985_149299508_149299638_149300270_149300355_149301132_149301231_149302417_149302527_149306305_149306405_149307401_149307614_149309955_149310136_149312111_149312205_149315820_149315915_149316150_149316304_149317728_149317941_149319581_149319728_149320390_149320464_149322605_149322718_149329665_149329831_149332694_149332874_149335593_149335723_149340006
transcript_16376.known	chr1	-	964	5	FSM	ENSG00000158796.17	ENST00000464113.1	964	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	133.529959185196	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCATCAAGCTGCTGGTA	-161129666	True	NA	NA	False	NA	NA	NA	161132588	161122241	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_161122524_161123074_161123222_161123838_161123947_161124137_161124527_161132550
transcript_163765.known	chr5	+	1289	9	FSM	ENSG00000157510.14	ENST00000455574.6	1289	9	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_7	7.59522876548166	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATGCATGAACAAACGAG	149271177	True	NA	NA	False	AATAAA	-16	NA	149271870	149312375	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_149271985_149299508_149299638_149300270_149300355_149301132_149301231_149302417_149302527_149306305_149306405_149307401_149307614_149309955_149310136_149312111
transcript_163766.known	chr5	+	4020	4	FSM	ENSG00000164284.15	ENST00000329271.8	4020	4	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_2	3.29983164553722	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGTTTAGAGTCTT	149341122	True	NA	13	True	AATAAA	-22	NA	149345498	149354583	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_149345617_149348271_149348426_149349653_149349736_149350917
transcript_163768.known	chr5	+	4109	4	FSM	ENSG00000164284.15	ENST00000507562.1	4109	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	115.26491226735	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGTTTAGAGTCTT	149345579	True	NA	13	True	AATAAA	-22	NA	149345618	149354583	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_149345826_149348271_149348426_149349653_149349736_149350917
transcript_163774.known	chr5	+	2500	6	FSM	ENSG00000145882.11	ENST00000511945.5	2500	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	22.6327196774935	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGACCTGTTCTTTTCT	149356947	True	NA	20	True	AGTAAA	-16	NA	149358068	149369653	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_149358173_149362636_149362844_149364035_149364211_149365941_149366154_149367359_149367501_149367992
transcript_163782.known	chr5	-	2570	11	FSM	ENSG00000113712.19	ENST00000515768.6	2570	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	588.018443588294	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCATTCTTTCATTTTTTT	-149536963	True	NA	NA	False	AAAAAG	-24	NA	149551404	149495784	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_149496861_149505482_149505596_149507026_149507134_149509878_149509954_149511793_149511873_149513069_149513210_149517793_149517878_149520289_149520389_149525044_149525172_149550074_149550182_149550841
transcript_163783.known	chr5	-	5444	11	FSM	ENSG00000113712.19	ENST00000261798.10	5444	11	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_6	523.08492618312	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACTCACTGAATAAGATAC	-149536998	True	NA	NA	False	AATAAA	-16	NA	149551439	149492981	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_149496861_149505446_149505596_149507026_149507134_149509878_149509954_149511793_149511873_149513069_149513210_149517793_149517878_149520289_149520389_149525044_149525172_149550074_149550182_149550841
transcript_163801.known	chr5	-	4902	10	FSM	ENSG00000113712.19	ENST00000657001.1	4902	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	439.973175388828	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTGGCTAGGAGCAGTG	-149536956	True	NA	NA	False	NA	NA	NA	149551397	149493361	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_149496861_149505482_149505596_149507026_149507134_149509878_149509954_149511793_149511873_149513069_149513210_149520289_149520389_149525044_149525172_149550074_149550182_149550841
transcript_163803.known	chr5	-	5360	10	FSM	ENSG00000113712.19	ENST00000377843.8	5360	10	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_1	302.854485695974	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACTCACTGAATAAGATAC	-149536998	True	NA	NA	False	AATAAA	-16	NA	149551439	149492981	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_149496861_149505446_149505596_149507026_149507134_149509878_149509954_149511793_149511873_149513069_149513210_149520289_149520389_149525044_149525172_149550074_149550182_149550841
transcript_163814.known	chr5	-	2052	9	FSM	ENSG00000113712.19	ENST00000657462.1	2052	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	605.7289900401	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATTCCTTTGCAAGTCAA	-149551169	False	NA	14	True	NA	NA	NA	149551192	149495879	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_149496861_149505482_149505596_149507026_149507134_149509878_149509954_149511793_149511873_149513069_149513210_149520289_149520389_149550074_149550182_149550841
transcript_163820.nic	chr5	-	1279	6	ISM	ENSG00000113712.19	ENST00000606719.6	2476	11	-225	15931	-96	1414	5prime_fragment	FALSE	canonical	3	1284	junction_5	94.9673628148113	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACCAGACTCACATTATC	-149551544	False	NA	-1	True	AATAGA	-29	NA	149551567	149511792	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_149511873_149513069_149513210_149520289_149520389_149525044_149525172_149550074_149550182_149550841
transcript_163830.known	chr5	+	10569	12	FSM	ENSG00000155846.17	ENST00000309241.10	10569	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	8.34781111509018	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGCCCATGTGTGTTTT	149728332	True	NA	28	True	ATTAAA	-19	NA	149730309	149855022	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_149730421_149820432_149820607_149826672_149826886_149830766_149830884_149832655_149833779_149834673_149834711_149835300_149835366_149836262_149837074_149840040_149840117_149842255_149842378_149845759_149845915_149847457
transcript_163839.known	chr5	+	4803	11	FSM	ENSG00000155846.17	ENST00000394320.7	4803	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	8.15107354892593	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAATCAATG	149728323	True	NA	NA	False	NA	NA	NA	149730300	149847704	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_149730421_149820432_149820607_149826672_149826886_149830766_149830884_149832655_149833779_149834673_149834711_149835300_149835366_149836262_149837074_149840040_149840117_149842255_149842378_149845759
transcript_163842.known	chr5	+	3004	11	FSM	ENSG00000155846.17	ENST00000360453.8	3004	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	11.9012604374495	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTTAACCCTCGAGGAAT	149728320	True	NA	NA	False	NA	NA	NA	149730297	149847562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_149730421_149820432_149820607_149826672_149826886_149832655_149833779_149834673_149834711_149835300_149835366_149836262_149837074_149840040_149840117_149842255_149842378_149845759_149845915_149847457
transcript_163853.nic	chr5	+	3668	10	ISM	ENSG00000155846.17	ENST00000360453.8	3004	11	-27	906	-27	-906	5prime_fragment	FALSE	canonical	2	3	junction_3	12.175668917158	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTACTGGAGAGAATCCA	149728293	True	NA	NA	False	AAGAAA	-11	NA	149730270	149846656	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_149730421_149820432_149820607_149826672_149826886_149832655_149833779_149834673_149834711_149835300_149835366_149836262_149837074_149840040_149840117_149842255_149842378_149845759
transcript_163857.nic	chr5	+	2303	5	ISM	ENSG00000155846.17	ENST00000394320.7	4803	11	-279	13649	-276	-13507	5prime_fragment	FALSE	canonical	3	19	junction_4	8.78564169540279	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGGATAATTACAAAATTG	149729964	True	NA	NA	False	AGTAAA	-8	NA	149730021	149834055	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_149730421_149820432_149820607_149826672_149826886_149830766_149830884_149832655
transcript_163858.known	chr5	+	5275	21	FSM	ENSG00000113716.13	ENST00000503427.5	5275	21	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_7	40.6638352839473	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAAGAGCATCCCCTTC	NA	False	NA	NA	False	NA	NA	NA	150000320	150052823	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_150001180_150004850_150004990_150006472_150006648_150010110_150010609_150012254_150012354_150018565_150018698_150024261_150024409_150024504_150024681_150026705_150026882_150027019_150027118_150030740_150030840_150032453_150032604_150036635_150036938_150037399_150037528_150040747_150040880_150041784_150041970_150045465_150045686_150047623_150047758_150048568_150048686_150050251_150050462_150051724
transcript_163863.known	chr5	+	5258	20	FSM	ENSG00000113716.13	ENST00000502717.6	5258	20	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_9	28.3726683667453	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTTTGGTGTAGCAGG	149997666	True	NA	14	True	AATAAA	-14	NA	150000738	150053128	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_150001180_150004850_150004990_150006472_150006648_150010110_150010609_150012254_150012354_150018565_150018698_150024261_150024681_150026705_150026882_150027019_150027118_150030740_150030840_150032453_150032604_150036635_150036938_150037399_150037528_150040747_150040880_150041784_150041970_150045465_150045686_150047623_150047758_150048568_150048686_150050251_150050462_150051724
transcript_163867.nnic	chr5	+	4798	19	NIC	ENSG00000113716.13	novel	5258	20	NA	NA	-38	0	intron_retention	FALSE	canonical	2	9	junction_3	40.1237668554021	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTTTGGTGTAGCAGG	149997628	True	NA	14	True	AATAAA	-14	NA	150000700	150053128	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_150001180_150004850_150004990_150006472_150006648_150012254_150012354_150018565_150018698_150024261_150024681_150026705_150026882_150027019_150027118_150030740_150030840_150032453_150032604_150036635_150036938_150037399_150037528_150040747_150040880_150041784_150041970_150045465_150045686_150047623_150047758_150048568_150048686_150050251_150050462_150051724
transcript_163870.nnic	chr5	+	4699	18	NIC	ENSG00000113716.13	novel	5258	20	NA	NA	-38	0	intron_retention	FALSE	canonical	3	8	junction_3	41.4616177198217	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTTTGGTGTAGCAGG	149997628	True	NA	14	True	AATAAA	-14	NA	150000700	150053128	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_150001180_150004850_150004990_150006472_150006648_150018565_150018698_150024261_150024681_150026705_150026882_150027019_150027118_150030740_150030840_150032453_150032604_150036635_150036938_150037399_150037528_150040747_150040880_150041784_150041970_150045465_150045686_150047623_150047758_150048568_150048686_150050251_150050462_150051724
transcript_163875.known	chr5	+	8054	3	FSM	ENSG00000155850.9	ENST00000286298.5	8054	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	3	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTACTCTGTATTTAAATT	149959270	True	NA	10	True	AATAAA	-18	NA	149960757	149987400	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_149960980_149977627_149978352_149980292
transcript_163879.nic	chr5	+	798	2	ISM	ENSG00000113716.13	ENST00000503427.5	5275	21	164	47870	164	-35870	5prime_fragment	FALSE	canonical	3	135	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTATAAAATACATGGAGAAA	NA	False	NA	NA	False	AAGAAA	-3	NA	150000484	150004953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_150001180_150004850
transcript_16388.known	chr1	+	888	6	FSM	ENSG00000143222.12	ENST00000368003.6	888	6	0	0	0	0	multi-exon	FALSE	canonical	3	856	junction_5	69.5258225409811	371	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGGTTCTCATTGGGA	161143167	True	NA	19	True	AATAAA	-18	NA	161153977	161158856	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161154121_161156949_161157018_161157253_161157318_161157616_161157694_161158120_161158212_161158411
transcript_163880.known	chr5	-	2429	2	FSM	ENSG00000164296.7	ENST00000515406.2	2429	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGTTGAGCCAATTTAAG	-150000385	True	NA	-3	True	AATAAA	-15	NA	150000654	149994727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_149996430_149999927
transcript_163883.known	chr5	-	3493	2	FSM	ENSG00000164296.7	ENST00000296736.4	3493	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGTACATATTTTAAAT	-150000385	True	NA	NA	False	AATAAA	-25	NA	150000654	149993117	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_149996430_150000473
transcript_163884.known	chr5	-	5700	23	FSM	ENSG00000113721.14	ENST00000261799.9	5700	23	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_22	3.83465063005034	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGTGGTCTCTCTCGG	-150155502	True	NA	1	True	ATTAAA	-21	NA	150155845	150113838	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_150115947_150117617_150117851_150118746_150118853_150119466_150119567_150120011_150120124_150120887_150121011_150121203_150121323_150121879_150122041_150123041_150123202_150124249_150124361_150124726_150124832_150125444_150125578_150126519_150126615_150129756_150129969_150130538_150130663_150131978_150132095_150132749_150132943_150133585_150133761_150133880_150134009_150134749_150135017_150135554_150135879_150137007_150137054_150155396
transcript_163887.known	chr5	+	1775	3	FSM	ENSG00000113722.18	ENST00000231656.13	1775	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCACCTTCCCCAGCAAT	150166764	True	NA	NA	False	ATTAAA	-27	NA	150166777	150184558	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_150167322_150182767_150182914_150183473
transcript_163888.known	chr5	-	3113	2	FSM	ENSG00000183876.9	ENST00000328668.8	3113	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGGATGCAGTGCTGTC	-150302886	False	NA	-11	True	ATTAAA	-17	NA	150302905	150296342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_150298613_150302062
transcript_163891.known	chr5	+	5026	27	FSM	ENSG00000070814.22	ENST00000643257.2	5026	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	208.362678801075	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTCCCAGTGCATCTGG	150330701	True	NA	19	True	AATAAA	-19	NA	150357696	150400293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150387901_150388089_150389886_150390024_150391543_150391658_150391956_150392177_150392704_150392791_150393371_150393553_150396281_150396843_150398353_150398452_150399021_150399071_150399809
transcript_163892.nic	chr5	+	4666	26	NIC	ENSG00000070814.22	novel	5026	27	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	262.63271388005	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAGAAGAAAAAGAAGAAAA	NA	False	NA	NA	False	AAAAAG	-30	NA	150357612	150398429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150383061_150383173_150387901_150388089_150389886_150390024_150391543_150391658_150391956_150392177_150392704_150392791_150393371_150393553_150396281_150396843_150398353
transcript_163898.nic	chr5	+	4572	25	NIC	ENSG00000070814.22	novel	5026	27	NA	NA	-16	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_15	263.568776602996	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGAAATCCGACAAGAGT	NA	False	NA	18	True	NA	NA	NA	150357612	150396824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150383061_150383173_150387901_150388089_150389886_150390024_150391543_150391658_150391956_150392177_150392704_150392791_150393371_150393553_150396281
transcript_163900.nic	chr5	+	4555	25	ISM	ENSG00000070814.22	ENST00000643257.2	5026	27	-84	1864	-16	0	5prime_fragment	FALSE	canonical	0	0	junction_15	193.185786909619	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAGAAGAAAAAGAAGAAAA	NA	False	NA	NA	False	AAAAAG	-30	NA	150357612	150398429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150387901_150388089_150389886_150390024_150391543_150391658_150391956_150392177_150392704_150392791_150393371_150393553_150396281_150396843_150398353
transcript_163904.nic	chr5	+	4461	24	ISM	ENSG00000070814.22	ENST00000643257.2	5026	27	-84	3469	-16	0	5prime_fragment	FALSE	canonical	0	0	junction_15	193.418886835022	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGAAATCCGACAAGAGT	NA	False	NA	18	True	NA	NA	NA	150357612	150396824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150387901_150388089_150389886_150390024_150391543_150391658_150391956_150392177_150392704_150392791_150393371_150393553_150396281
transcript_163917.nic	chr5	+	4347	23	ISM	ENSG00000070814.22	ENST00000439160.6	4644	26	-101	3218	-16	0	5prime_fragment	FALSE	canonical	0	0	junction_15	237.417097318566	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGAAATCCGACAAGAGT	NA	False	NA	18	True	NA	NA	NA	150357612	150396824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150387901_150388089_150389886_150390024_150391956_150392177_150392704_150392791_150393371_150393553_150396281
transcript_163918.nnic	chr5	+	4281	23	NIC	ENSG00000070814.22	novel	5026	27	NA	NA	-16	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_15	193.483000513232	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGAAATCCGACAAGAGT	NA	False	NA	18	True	NA	NA	NA	150357612	150396824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379531_150379733_150387901_150388089_150389886_150390024_150391543_150391658_150391956_150392177_150392704_150392791_150393371_150393553_150396281
transcript_163920.nic	chr5	+	4230	23	ISM	ENSG00000070814.22	ENST00000445265.6	4825	26	-53	3468	-16	0	5prime_fragment	FALSE	canonical	0	0	junction_14	233.06098233639	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGAAATCCGACAAGAGT	NA	False	NA	18	True	NA	NA	NA	150357612	150396824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150387901_150388089_150389886_150390024_150391543_150391658_150391956_150392177_150392704_150392791_150393371_150393553_150396281
transcript_163921.known	chr5	+	4194	23	FSM	ENSG00000070814.22	ENST00000650162.1	4194	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	270.342864641939	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAGAAGAAAAAGAAGAAAA	NA	False	NA	NA	False	AAAAAG	-30	NA	150357628	150398429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150387901_150388089_150389886_150390024_150391956_150392177_150392704_150392791_150393371_150393553_150396281_150396843_150398353
transcript_163926.nic	chr5	+	4116	22	ISM	ENSG00000070814.22	ENST00000650162.1	4194	23	-16	1605	-16	0	5prime_fragment	FALSE	canonical	0	0	junction_14	272.147818977389	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGAAATCCGACAAGAGT	NA	False	NA	18	True	NA	NA	NA	150357612	150396824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150387901_150388089_150389886_150390024_150391956_150392177_150392704_150392791_150393371_150393553_150396281
transcript_16393.known	chr1	+	2315	14	FSM	ENSG00000143258.16	ENST00000368002.8	2315	14	0	0	0	0	multi-exon	FALSE	non_canonical	1	45	junction_11	65.4823703633456	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGCTTATTTGTATTT	161156574	True	NA	NA	False	AATAAA	-16	NA	161159499	161165723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161159679_161160365_161160507_161160619_161161241_161162037_161162098_161162269_161162391_161162614_161162727_161162918_161163075_161163554_161163620_161163877_161163982_161164163_161164251_161164533_161164613_161164834_161164943_161165028_161165144_161165356
transcript_163931.known	chr5	+	3526	19	FSM	ENSG00000070814.22	ENST00000513538.2	3526	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	320.656598748549	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGGTAACTCCCTGTATT	150330708	True	NA	4	True	AGTAAA	-17	NA	150357703	150384253	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150383064_150383173_150383737
transcript_163935.known	chr5	+	3400	18	FSM	ENSG00000070814.22	ENST00000394269.7	3400	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	279.100036635302	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACATCGGTAACTCCCTG	150330722	True	NA	0	True	AGTAAA	-13	NA	150357717	150384249	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150383737
transcript_163953.known	chr5	-	3092	9	FSM	ENSG00000019582.17	ENST00000009530.13	1653	9	159	-1598	0	1596	multi-exon	FALSE	canonical	3	27	junction_3	133.649670313847	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAAGCGTCCTGTGTTGG	-150409151	True	NA	NA	False	AATACA	-18	NA	150412751	150400040	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_150402251_150402562_150402626_150403120_150403313_150404679_150404768_150405084_150405181_150406258_150406322_150406880_150406961_150407151_150407325_150412624
transcript_163955.known	chr5	-	1270	8	FSM	ENSG00000019582.17	ENST00000353334.11	1270	8	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_2	25.3175747621437	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCACATTAGAATAAAAGGT	-150409150	True	NA	-38	True	NA	NA	NA	150412750	150401669	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_150402251_150402562_150402626_150404679_150404768_150405084_150405181_150406258_150406322_150406880_150406961_150407151_150407325_150412624
transcript_163957.known	chr5	+	4467	26	FSM	ENSG00000070814.22	ENST00000504761.6	4467	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	224.853104047954	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGCACCAGCACCAGGCAC	150330751	True	NA	NA	False	NA	NA	NA	150357746	150399048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150387901_150388089_150389886_150390024_150391543_150391658_150391956_150392177_150392707_150392791_150393371_150393553_150396281_150396843_150398353_150398452_150399021
transcript_163959.known	chr5	-	712	5	FSM	ENSG00000164587.13	ENST00000312037.6	712	5	0	0	0	0	multi-exon	FALSE	canonical	3	2923	junction_4	11962.2284922167	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTCAACTCCAGCCTTC	-150236791	True	NA	-28	True	AATAAA	-16	NA	150449691	150444237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_150444354_150445608_150445686_150446801_150446964_150447584_150447736_150449485
transcript_163960.known	chr5	-	2146	5	FSM	ENSG00000164587.13	ENST00000407193.7	2146	5	0	0	0	0	multi-exon	FALSE	canonical	3	21984	junction_4	3950.2178025395	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGGTTTCCTACTTTTG	-150236839	True	NA	NA	False	AATAAA	-41	NA	150449739	150442634	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_150444354_150445608_150445686_150446801_150446964_150447584_150447736_150449702
transcript_163964.nnic	chr5	+	4204	15	NNC	ENSG00000070614.15	novel	777	2	NA	NA	-30	550	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_1	16.5838930955334	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAATATTTTGTTTTT	150484022	True	NA	1	True	NA	NA	NA	150485787	150554264	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_150486024_150520867_150521768_150527803_150528299_150532944_150533033_150534866_150535022_150535699_150535886_150539227_150539357_150540081_150540265_150541569_150541667_150542847_150542972_150545311_150545487_150548217_150548389_150549677_150549788_150551752_150551856_150553212
transcript_163979.nnic	chr5	+	2440	7	NNC	ENSG00000070614.15	novel	777	2	NA	NA	-39	-11301	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_1	20.9078666747444	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCATGTTCCCTTCAGTC	150484013	True	NA	NA	False	AATACA	-17	NA	150485778	150539598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_150486024_150520867_150521768_150527803_150528299_150532944_150533033_150534866_150535022_150535699_150535886_150539227
transcript_163980.nnic	chr5	+	2613	7	NNC	ENSG00000070614.15	novel	777	2	NA	NA	-41	-11130	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_1	20.9078666747444	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTCTGTGGGCTGAGTA	150484011	True	NA	17	True	AATAAA	-21	NA	150485776	150539769	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_150486024_150520867_150521768_150527803_150528299_150532944_150533033_150534866_150535022_150535699_150535886_150539227
transcript_163982.nic	chr5	+	2604	7	NIC	ENSG00000070614.15	novel	777	2	NA	NA	-223	-11301	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	29.8198293459608	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCATGTTCCCTTCAGTC	150485567	False	NA	NA	False	AATACA	-17	NA	150485594	150539598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_150486004_150520867_150521768_150527803_150528299_150532944_150533033_150534866_150535022_150535699_150535886_150539227
transcript_163983.nic	chr5	+	2589	7	NIC	ENSG00000070614.15	novel	777	2	NA	NA	-37	-11130	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	29.8198293459608	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTCTGTGGGCTGAGTA	150484015	True	NA	17	True	AATAAA	-21	NA	150485780	150539769	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_150486004_150520867_150521768_150527803_150528299_150532944_150533033_150534866_150535022_150535699_150535886_150539227
transcript_163986.nic	chr5	+	2564	7	NIC	ENSG00000070614.15	novel	437	2	NA	NA	-84	-11130	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	35.2676275861527	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTCTGTGGGCTGAGTA	150486164	False	NA	17	True	AATAAA	-21	NA	150486209	150539769	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_150486408_150520867_150521768_150527803_150528299_150532944_150533033_150534866_150535022_150535699_150535886_150539227
transcript_163998.nic	chr5	+	3217	4	ISM	ENSG00000164591.14	ENST00000517768.6	3427	7	10159	3	-11	0	3prime_fragment	FALSE	canonical	3	23	junction_1	15.195028426722	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGTAAAATGTGAAGTGTC	150671183	False	NA	NA	False	AATAAA	-18	NA	150671409	150679365	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_150671651_150671754_150671909_150672339_150672503_150676706
transcript_1640.nic	chr1	-	1558	11	NIC	ENSG00000116213.16	novel	1692	12	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	81.8511453798907	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTCTCTTCTTGAAACG	-3646724	True	NA	-2	True	AATAAA	-20	NA	3650104	3630769	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_3631118_3631465_3631658_3632212_3632339_3633397_3633504_3634996_3635075_3635943_3636031_3636994_3637099_3638749_3638823_3646665_3646783_3647407_3647561_3649930
transcript_16400.known	chr1	+	2195	13	FSM	ENSG00000143258.16	ENST00000289865.12	2195	13	0	0	0	0	multi-exon	FALSE	non_canonical	1	45	junction_10	55.8440288263262	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGCTTATTTGTATTT	161156553	True	NA	NA	False	AATAAA	-16	NA	161159478	161165723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161159679_161160619_161161241_161162037_161162098_161162269_161162391_161162614_161162727_161162918_161163075_161163554_161163620_161163877_161163982_161164163_161164251_161164533_161164613_161164834_161164943_161165028_161165144_161165356
transcript_164004.known	chr5	+	3290	2	FSM	ENSG00000164591.14	ENST00000456566.2	3290	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAGTAAAATGTGAAGTG	150672507	False	NA	NA	False	AATAAA	-16	NA	150672651	150679363	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_150673285_150676706
transcript_164007.known	chr5	-	425	2	FSM	ENSG00000250309.2	ENST00000511626.2	425	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGGTGGCTTACTCACC	-150672127	False	NA	NA	False	NA	NA	NA	150672390	150670657	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_150670808_150672115
transcript_164014.known	chr5	-	2299	11	FSM	ENSG00000086589.12	ENST00000199814.9	2299	11	0	0	0	0	multi-exon	FALSE	canonical	2	200	junction_5	43.3912433562349	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGTCATGGGTTTATT	-150697640	True	NA	-6	True	ATTAAA	-17	NA	150701062	150690791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_150691882_150692894_150693027_150693218_150693308_150694075_150694241_150695505_150695707_150696532_150696706_150696790_150696892_150698498_150698632_150699241_150699272_150700443_150700498_150700931
transcript_164015.nnic	chr5	-	2316	11	NNC	ENSG00000086589.12	novel	2299	11	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_4	95.5772462461647	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGTTGTCATGGGTTTA	-150697687	True	NA	-8	True	ATTAAA	-15	NA	150701109	150690793	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_150691882_150692894_150693027_150693218_150693308_150694075_150694241_150695533_150695707_150696532_150696706_150696790_150696892_150698498_150698632_150699241_150699272_150700443_150700498_150700931
transcript_164019.nic	chr5	-	1063	9	ISM	ENSG00000086589.12	ENST00000199814.9	2299	11	-47	2488	-32	-1761	5prime_fragment	FALSE	canonical	2	200	junction_3	47.8356561573059	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAAGATGGAACTACAGA	-150697687	True	NA	NA	False	AAGAAA	-3	NA	150701109	150693279	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_150693308_150694075_150694241_150695505_150695707_150696532_150696706_150696790_150696892_150698498_150698632_150699241_150699272_150700443_150700498_150700931
transcript_164021.known	chr5	-	1737	14	FSM	ENSG00000132912.13	ENST00000446090.6	1737	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	53.847912059207	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGGCATTGTATTTACC	-150755361	True	NA	NA	False	NA	NA	NA	150759035	150710857	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_150711363_150715564_150715663_150718275_150718384_150719715_150719771_150722906_150722981_150730630_150730741_150731043_150731157_150731415_150731490_150731885_150731907_150733367_150733476_150742113_150742158_150753478_150753658_150756416_150756488_150758858
transcript_164022.known	chr5	-	4116	13	FSM	ENSG00000132912.13	ENST00000447998.7	4116	13	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_4	14.4683562761405	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGGCCACTCATCACCT	-150755343	True	NA	NA	False	AATATA	-19	NA	150759017	150708439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_150711363_150715564_150715663_150718275_150718384_150719715_150719771_150722906_150722981_150730630_150730741_150731043_150731157_150731415_150731490_150733367_150733476_150742113_150742158_150753478_150753658_150756416_150756488_150758858
transcript_164025.known	chr5	-	576	6	FSM	ENSG00000132912.13	ENST00000517421.1	576	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	66.6291227617474	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACTGTGTGCCTAGGTGG	-150755421	False	NA	NA	False	NA	NA	NA	150759095	150736308	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_150736317_150742113_150742158_150753478_150753658_150755530_150755568_150756416_150756488_150758858
transcript_164026.known	chr5	-	4054	13	FSM	ENSG00000132912.13	ENST00000424236.5	4054	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	42.7378150275998	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGTGTCTTTTGTTTGCTC	-150754846	False	3674	-7	True	AATAAA	-15	NA	150758520	150708747	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_150711363_150715564_150715663_150718275_150718384_150719715_150719771_150722906_150722981_150730630_150730741_150731043_150731157_150731415_150731490_150733367_150733476_150742113_150742158_150753478_150753658_150756416_150756488_150758115
transcript_164027.known	chr5	+	1521	2	FSM	ENSG00000256235.3	ENST00000526627.2	1521	2	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	0	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTGAGGTCTTTCTTT	150777596	True	NA	7	True	AATAAA	-14	NA	150778756	150796734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_150778973_150795429
transcript_164028.nnic	chr5	-	3420	7	NNC	ENSG00000145908.13	novel	3258	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	67.2716301439338	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCTGCCTAATGTCTCTT	-150902601	True	NA	-21	True	CATAAA	-21	NA	150904980	150894398	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_150896974_150898057_150898185_150898427_150898555_150902408_150902567_150903140_150903183_150903863_150903978_150904703
transcript_164031.known	chr5	-	3323	7	FSM	ENSG00000145908.13	ENST00000446148.6	3323	7	0	0	0	0	multi-exon	FALSE	non_canonical	1	20	junction_4	62.22182539556	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAATGTCTCTTCACTTCT	-150904973	False	NA	-14	True	CATAAA	-28	NA	150904983	150894391	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_150896974_150898061_150898185_150898427_150898555_150903140_150903183_150903328_150903384_150903863_150903978_150904703
transcript_164032.known	chr5	-	3256	6	FSM	ENSG00000145908.13	ENST00000394226.2	3256	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	59.8952418811378	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCTGCCTAATGTCTCTT	-150902599	True	NA	-21	True	CATAAA	-21	NA	150904978	150894398	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_150896970_150898057_150898185_150898427_150898555_150903140_150903183_150903863_150903978_150904703
transcript_164037.known	chr5	-	3226	5	FSM	ENSG00000145908.13	ENST00000418587.6	3226	5	0	0	0	0	multi-exon	FALSE	non_canonical	1	9	junction_3	72.5650570178237	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAATGTCTCTTCACTTCT	-150904973	False	NA	-14	True	CATAAA	-28	NA	150904983	150894391	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_150896974_150898061_150898185_150898427_150898555_150903863_150903978_150904703
transcript_164038.known	chr5	-	4155	5	FSM	ENSG00000145908.13	ENST00000427179.5	4155	5	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_3	30.7652401258303	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCTGCCTAATGTCTCTT	-150904779	False	NA	-21	True	CATAAA	-21	NA	150904789	150894398	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_150898185_150898427_150898555_150903140_150903183_150903863_150903978_150904703
transcript_164041.known	chr5	+	1757	6	NNC	ENSG00000211445.13	novel	1603	5	NA	NA	-153	4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	176.616647007013	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTACTGTGTGTGGTGCT	NA	False	NA	20	True	AGTAAA	-20	NA	151020437	151028992	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_151020742_151025339_151025469_151025471_151025494_151026899_151027018_151027431_151027532_151027908
transcript_164043.known	chr5	+	1478	6	NNC	ENSG00000211445.13	novel	1603	5	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	176.616647007013	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGAGCCTACTGTGTGTG	151018056	True	NA	15	True	AGTAAA	-15	NA	151020588	151028987	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_151020742_151025339_151025494_151026899_151027018_151027431_151027532_151027908_151028777_151028902
transcript_164047.known	chr5	+	1603	5	FSM	ENSG00000211445.13	ENST00000388825.9	1603	5	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_4	20.0919760103381	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGCCTACTGTGTGTGG	151018058	True	NA	16	True	AGTAAA	-16	NA	151020590	151028988	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_151020742_151025339_151025494_151026899_151027018_151027431_151027532_151027908
transcript_164048.known	chr5	+	612	4	FSM	ENSG00000211445.13	ENST00000517973.1	612	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	200.150498930735	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGACTTTGTTCAGGAAG	151018073	True	NA	NA	False	NA	NA	NA	151020605	151028166	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_151020742_151026899_151027018_151027431_151027532_151027908
transcript_164049.nnic	chr5	-	3324	19	NNC	ENSG00000145901.16	novel	2870	18	NA	NA	-346	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	51.0408937961138	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTGACTCATGTTCATT	NA	False	NA	-7	True	CATAAA	-21	NA	151081430	151029944	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_151030748_151031255_151031314_151032286_151032384_151033607_151033800_151035001_151035068_151035581_151035708_151036789_151036922_151039096_151039226_151042539_151042672_151042895_151042962_151045860_151045951_151049823_151049948_151052164_151052260_151056765_151056958_151060317_151060396_151062126_151062213_151063612_151063748_151064959_151065132_151080879
transcript_164055.known	chr5	-	2935	18	FSM	ENSG00000145901.16	ENST00000389378.6	2935	18	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	38.1022118349159	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCTGACTCATGTTCA	-151078645	True	NA	-9	True	CATAAA	-19	NA	151081084	151029946	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_151030748_151032286_151032401_151033607_151033800_151035001_151035068_151035581_151035708_151036789_151036922_151039096_151039226_151042539_151042672_151042895_151042962_151045860_151045951_151049823_151049948_151052164_151052260_151056765_151056958_151060317_151060396_151062126_151062213_151063612_151063748_151064959_151065132_151080879
transcript_164057.known	chr5	-	2200	18	FSM	ENSG00000145901.16	ENST00000518977.5	2200	18	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	34.6249305147142	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTACACCAGTCCCTGAA	-151078635	True	NA	NA	False	NA	NA	NA	151081074	151030580	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_151030674_151032286_151032384_151033607_151033800_151035001_151035068_151035581_151035708_151036789_151036922_151039096_151039226_151042539_151042672_151042895_151042962_151045860_151045951_151049823_151049948_151052164_151052260_151056765_151056958_151060317_151060396_151062126_151062213_151063612_151063748_151064959_151065132_151080879
transcript_164060.known	chr5	-	2680	17	FSM	ENSG00000145901.16	ENST00000520931.5	2680	17	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_16	39.3200012716175	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTGACTCATGTTCATT	-151078577	True	NA	-7	True	CATAAA	-21	NA	151081016	151029944	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_151030748_151032286_151032384_151033607_151033800_151035001_151035068_151035581_151035708_151036789_151036922_151039096_151039226_151042539_151042672_151042895_151042962_151045860_151045951_151049823_151049948_151052164_151052260_151056765_151056958_151060317_151060396_151062126_151062213_151063612_151063748_151080879
transcript_164063.known	chr5	-	2682	17	FSM	ENSG00000145901.16	ENST00000610535.5	2682	17	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	40.8103464209752	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTGAAGAAGATCAACATT	-151078615	True	NA	-23	True	CATAAA	-5	NA	151081054	151029960	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_151030748_151032286_151032384_151035001_151035068_151035581_151035708_151036789_151036922_151039096_151039226_151042539_151042672_151042895_151042962_151045860_151045951_151049823_151049948_151052164_151052260_151056765_151056958_151060317_151060396_151062126_151062213_151063612_151063748_151064959_151065132_151080879
transcript_164074.known	chr5	-	2889	26	FSM	ENSG00000197043.14	ENST00000354546.10	2889	26	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_17	23.9193979857353	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCAGTGAGGGCCTCTGT	-151146541	True	NA	NA	False	AATAAA	-27	NA	151157779	151100705	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_151101508_151103569_151103693_151105244_151105304_151108454_151108551_151109752_151109847_151110626_151110645_151117126_151117181_151117757_151117838_151119299_151119391_151122146_151122261_151122916_151123012_151124285_151124368_151126401_151126481_151128180_151128240_151129406_151129530_151131230_151131290_151132475_151132572_151133093_151133188_151134426_151134484_151136255_151136336_151137230_151137322_151138677_151138792_151139352_151139448_151140152_151140244_151147883_151147927_151157679
transcript_164076.nic	chr5	-	2470	25	NIC	ENSG00000197043.14	novel	2451	25	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_24	52.1167059748279	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAGTAGTGTCTGTAC	-151146568	True	NA	-7	True	AAAACA	-19	NA	151157806	151101108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_151101508_151103569_151103693_151105244_151105304_151108454_151108551_151109752_151109847_151110626_151110645_151117126_151117181_151117757_151117838_151119299_151119391_151122146_151122261_151122916_151123012_151124285_151124368_151126401_151126481_151128180_151128240_151129406_151129530_151131230_151131290_151132475_151132572_151133093_151133188_151134426_151134484_151136255_151136336_151137230_151137322_151138677_151138792_151139352_151139448_151140152_151140244_151157679
transcript_164084.known	chr5	-	3398	9	FSM	ENSG00000198624.13	ENST00000355417.7	3398	9	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	4.8331537322953	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGTGACTTTTGTGTTT	-151222649	True	NA	-8	True	AAAAAG	-17	NA	151224092	151181051	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_151183615_151184343_151184442_151185421_151185542_151186022_151186125_151187385_151187460_151198996_151199085_151201581_151201689_151205399_151205476_151223922
transcript_164092.nnic	chr5	+	2140	5	NNC	ENSG00000196743.9	novel	3603	4	NA	NA	-223	-1202	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	57.7797542396989	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACAGTTTCCCCTTGCCTT	NA	False	NA	15	True	AATAAA	-15	NA	151252961	151269238	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_151253298_151259754_151259917_151266730_151266914_151267295_151268182_151268665
transcript_164095.known	chr5	+	3603	4	FSM	ENSG00000196743.9	ENST00000357164.4	3603	4	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	2.62466929133727	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTAGTGTTCTTACTATA	151247712	True	NA	47	True	AATAGA	-5	NA	151253184	151270440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_151253298_151259754_151259917_151266730_151266914_151267295
transcript_164107.known	chr5	+	5772	11	FSM	ENSG00000123643.13	ENST00000243389.8	5772	11	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_10	10.2024506859872	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTGCTATCTGTGTCTT	151445571	True	NA	23	True	AATAAA	-23	NA	151447602	151492379	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_151447814_151458787_151458936_151463552_151463644_151464513_151464603_151465073_151465170_151467198_151467284_151467706_151467926_151473672_151473772_151476589_151476757_151479319_151479490_151487982
transcript_164110.known	chr5	-	3451	10	FSM	ENSG00000113140.11	ENST00000231061.9	3451	10	0	0	0	0	multi-exon	FALSE	canonical	3	1129	junction_3	69.8327808693784	282	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGACCGGGTGCTCC	-151662220	True	NA	NA	False	AATAAA	-22	NA	151686915	151661095	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_151663600_151664086_151664236_151666360_151666510_151667466_151667601_151669663_151669785_151671572_151671695_151673128_151673217_151674611_151674675_151676131_151676202_151686864
transcript_164124.known	chr5	+	10011	13	FSM	ENSG00000145907.16	ENST00000678925.1	10011	13	0	0	0	0	multi-exon	FALSE	canonical	2	33	junction_12	820.180311306944	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTATCTCTCTGTTGTCC	151732609	True	NA	NA	False	AATAAA	-28	NA	151771905	151812785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_151772037_151786571_151786716_151790322_151790405_151790888_151791063_151794158_151794250_151795478_151795576_151797226_151797429_151799211_151799314_151799888_151800001_151800217_151800347_151800759_151800870_151803884_151804142_151804405
transcript_164129.known	chr5	+	1565	12	FSM	ENSG00000145907.16	ENST00000678070.1	1565	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	853.16687641297	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTGTGTGTTAATGG	151732597	True	NA	21	True	TATAAA	-24	NA	151771893	151804218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_151771913_151786602_151786716_151790322_151790405_151790888_151791063_151794158_151794250_151795478_151795576_151797226_151797429_151799211_151799314_151799888_151800001_151800217_151800347_151800759_151800870_151803884
transcript_164131.known	chr5	+	10622	12	FSM	ENSG00000145907.16	ENST00000678964.1	10622	12	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_11	861.175076506917	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTATCTCTCTGTTGTCC	151732609	True	NA	NA	False	AATAAA	-28	NA	151771905	151812785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_151772037_151786571_151786716_151790322_151790405_151790888_151791063_151794158_151794250_151795478_151795576_151797226_151797429_151799211_151799314_151799888_151800001_151800217_151800347_151800759_151800870_151803537
transcript_164133.known	chr5	+	10227	12	FSM	ENSG00000145907.16	ENST00000356245.8	10227	12	0	0	0	0	multi-exon	FALSE	canonical	3	2129	junction_1	286.505361754452	1797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTATCTCTCTGTTGTCC	151732657	True	NA	NA	False	AATAAA	-28	NA	151771953	151812785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_151772037_151786571_151786716_151790322_151790405_151790888_151791063_151794158_151794250_151795478_151795576_151797226_151797429_151799211_151799314_151799888_151800001_151800217_151800347_151800759_151800870_151803884
transcript_16414.nic	chr1	+	2442	12	NIC	ENSG00000143258.16	novel	2195	13	NA	NA	4	0	intron_retention	TRUE	canonical	3	117	junction_1	38.0656240660414	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGCTTATTTGTATTT	161159440	False	NA	NA	False	AATAAA	-16	NA	161159453	161165723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_161159679_161160619_161161241_161162037_161162098_161162269_161162391_161162614_161162727_161162918_161163075_161163554_161163620_161163877_161163982_161164163_161164251_161164533_161164943_161165028_161165144_161165356
transcript_164142.known	chr5	+	1768	12	FSM	ENSG00000145907.16	ENST00000676827.1	1768	12	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	812.766747058445	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGAATTTCCTTGCTTAC	151732642	True	NA	NA	False	TTTAAA	-15	NA	151771938	151804346	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_151772033_151786602_151786716_151790322_151790405_151790888_151791063_151794158_151794250_151795478_151795576_151797226_151797429_151799211_151799314_151799888_151800001_151800217_151800347_151800759_151800870_151803884
transcript_164143.known	chr5	+	10540	12	FSM	ENSG00000145907.16	ENST00000677323.1	10540	12	0	0	0	0	multi-exon	FALSE	canonical	2	101	junction_1	824.82032102966	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTATCTCTCTGTTGTCC	151772228	True	NA	NA	False	AATAAA	-28	NA	151772272	151812785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_151772669_151786571_151786716_151790322_151790405_151790888_151791063_151794158_151794250_151795478_151795576_151797226_151797429_151799211_151799314_151799888_151800001_151800217_151800347_151800759_151800870_151803884
transcript_164144.known	chr5	+	10136	11	FSM	ENSG00000145907.16	ENST00000677381.1	10136	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	867.003465967697	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTATCTCTCTGTTGTCC	151732657	True	NA	NA	False	AATAAA	-28	NA	151771953	151812785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_151772037_151786571_151786716_151790322_151790405_151790888_151791063_151795478_151795576_151797226_151797429_151799211_151799314_151799888_151800001_151800217_151800347_151800759_151800870_151803884
transcript_164153.known	chr5	-	471	4	FSM	ENSG00000177556.12	ENST00000313115.11	471	4	0	0	0	0	multi-exon	FALSE	canonical	3	733	junction_3	70.3815000945245	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTTGTCTTGCCTGGTCT	-151753489	True	NA	-5	True	AATAAA	-21	NA	151758631	151742821	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_151742960_151746278_151746450_151751703_151751780_151758545
transcript_164162.known	chr5	-	591	3	FSM	ENSG00000177556.12	ENST00000522710.1	591	3	0	0	0	0	multi-exon	FALSE	canonical	3	733	junction_2	84.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGAGTCCTCTTTCAGAC	-151753514	True	NA	NA	False	NA	NA	NA	151758656	151746045	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_151746450_151751703_151751780_151758545
transcript_164164.known	chr5	-	726	2	FSM	ENSG00000275765.6	ENST00000623943.2	1185	2	0	459	0	-459	multi-exon	FALSE	canonical	3	32	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAACATTTACAGATTAGT	-151771491	False	NA	NA	False	NA	NA	NA	151771508	151770241	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_151770773_151771313
transcript_164165.known	chr5	+	1794	13	FSM	ENSG00000145907.16	ENST00000678101.1	1794	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1074.38256170178	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATACAGACTGGATTTTTT	151732657	True	NA	NA	False	AAAAAG	-25	NA	151771953	151804371	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_151772037_151772656_151772669_151786602_151786716_151790322_151790405_151790888_151791063_151794158_151794250_151795478_151795576_151797226_151797429_151799211_151799314_151799888_151800001_151800217_151800347_151800759_151800870_151803884
transcript_164166.known	chr5	-	2059	4	FSM	ENSG00000132911.5	ENST00000255262.4	2059	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTATGGTGATCTGTG	-152405266	True	NA	NA	False	AATAAA	-17	NA	152405279	152391545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_152392502_152395458_152395585_152398059_152398145_152404387
transcript_164168.nic	chr5	-	2958	15	NIC	ENSG00000055147.19	novel	2121	15	NA	NA	3	-62	combination_of_known_junctions	FALSE	canonical	3	17	junction_13	28.223235470232	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATCCTTTCATTTACTT	-154037581	True	NA	-36	True	AATAAA	-18	NA	154038929	153991764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_153993111_153994918_153994973_153997802_153997876_154002250_154002391_154002846_154002970_154011240_154011321_154026398_154026523_154027175_154027335_154028148_154028284_154029488_154029581_154033790_154033884_154034277_154034378_154034743_154034968_154038292_154038435_154038856
transcript_164169.known	chr5	-	2121	15	FSM	ENSG00000055147.19	ENST00000520667.5	2121	15	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_13	30.2017028848185	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCATATGTAAACTCTG	-154037573	True	NA	NA	False	AATAAA	-20	NA	154038921	153992498	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_153993111_153994918_153994973_153997802_153997876_154002250_154002391_154002846_154002970_154011240_154011321_154026398_154026523_154027175_154027335_154028148_154028284_154029488_154029581_154033790_154033884_154034277_154034378_154034743_154034968_154038387_154038435_154038856
transcript_164173.known	chr5	-	4414	14	FSM	ENSG00000055147.19	ENST00000351797.9	4414	14	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_13	21.4776614376054	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTGTGATATTTCACAAA	-154037562	True	NA	NA	False	AATAAA	-25	NA	154038910	153990147	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_153993111_153994918_153994973_153997802_153997876_154002250_154002391_154002846_154002970_154011240_154011321_154026398_154026523_154027175_154027335_154028148_154028284_154029488_154029581_154033790_154033884_154034277_154034378_154034743_154034968_154038856
transcript_164180.known	chr5	+	5037	3	FSM	ENSG00000037749.13	ENST00000522782.6	5037	3	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	20	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTATAGTGTATGTTTC	154035069	True	NA	28	True	ATTAAA	-31	NA	154038966	154057450	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_154039012_154049556_154050018_154052919
transcript_164185.known	chr5	+	2891	3	FSM	ENSG00000037749.13	ENST00000322602.9	2891	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	49	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTGCCTGGCTGAGATC	154035095	True	NA	6	True	AATAAA	-15	NA	154038992	154055033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_154039309_154049556_154050018_154052919
transcript_164188.known	chr5	+	5958	12	FSM	ENSG00000164574.16	ENST00000297107.11	5958	12	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_9	10.8231463016892	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTCTCTGCCTTCTTCCT	154188586	True	NA	31	True	AGTAAA	-20	NA	154190732	154420984	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_154191026_154294815_154294919_154297940_154298080_154329571_154329739_154376276_154376463_154380447_154380632_154386312_154386431_154404103_154404212_154409540_154409763_154412888_154413006_154415782_154415933_154416813
transcript_164190.known	chr5	+	6185	4	FSM	ENSG00000164576.12	ENST00000297109.11	6185	4	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_2	29.1318840219212	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTGTCTTCCCTTTGAA	154445012	True	NA	18	True	AATAAA	-21	NA	154445996	154461053	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_154446806_154451090_154451214_154453401_154453501_154455899
transcript_164213.nnic	chr5	+	4107	19	NIC	ENSG00000155506.19	novel	6231	19	NA	NA	-381	995	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	130.986946856981	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAAAACCCCCACCTAAT	NA	False	NA	NA	False	CATAAA	-22	NA	154682604	154814915	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_154683038_154790324_154790387_154790644_154790711_154792621_154792797_154793594_154793724_154793799_154794001_154794099_154794263_154795174_154795320_154799590_154799760_154799872_154800043_154802006_154802400_154803289_154803414_154803539_154803746_154804200_154804308_154805880_154806033_154808458_154808604_154811246_154811357_154811512_154811641_154813886
transcript_164215.known	chr5	+	6652	19	FSM	ENSG00000155506.19	ENST00000336314.9	6652	19	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	134.514272499883	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGCTGGTCTTCCATCT	154712454	True	NA	33	True	AATAAA	-18	NA	154712842	154817605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_154713131_154790324_154790387_154790644_154790711_154792621_154792797_154793594_154793724_154793799_154794001_154794099_154794263_154795174_154795320_154799590_154799760_154799872_154800043_154802006_154802400_154803289_154803414_154803539_154803746_154804200_154804308_154805880_154806033_154808458_154808604_154811246_154811357_154811512_154811641_154813886
transcript_164217.nnic	chr5	+	4480	19	NIC	ENSG00000155506.19	novel	7181	19	NA	NA	-88	995	combination_of_known_junctions	FALSE	canonical	3	37	junction_6	127.32067999958	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAAAACCCCCACCTAAT	154755212	False	NA	NA	False	CATAAA	-22	NA	154755288	154814915	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_154756194_154790324_154790387_154790644_154790711_154792621_154792797_154793594_154793724_154793799_154793902_154794099_154794263_154795174_154795320_154799590_154799760_154799872_154800043_154802006_154802400_154803289_154803414_154803539_154803746_154804200_154804308_154805880_154806033_154808458_154808604_154811246_154811357_154811512_154811641_154813886
transcript_164218.nic	chr5	+	4574	19	NIC	ENSG00000155506.19	novel	7181	19	NA	NA	-161	995	combination_of_known_junctions	FALSE	canonical	3	54	junction_6	124.353798832004	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAAAACCCCCACCTAAT	154755203	False	NA	NA	False	CATAAA	-22	NA	154755215	154814915	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_154756194_154790324_154790387_154790644_154790711_154792621_154792797_154793594_154793724_154793799_154793923_154794099_154794263_154795174_154795320_154799590_154799760_154799872_154800043_154802006_154802400_154803289_154803414_154803539_154803746_154804200_154804308_154805880_154806033_154808458_154808604_154811246_154811357_154811512_154811641_154813886
transcript_164220.known	chr5	+	7181	19	FSM	ENSG00000155506.19	ENST00000518297.6	7181	19	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_6	91.3366618750058	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGCTGGTCTTCCATCT	154753021	True	NA	33	True	AATAAA	-18	NA	154755376	154817605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_154756194_154790324_154790387_154790644_154790711_154792621_154792797_154793594_154793724_154793799_154794001_154794099_154794263_154795174_154795320_154799590_154799760_154799872_154800043_154802006_154802400_154803289_154803414_154803539_154803746_154804200_154804308_154805880_154806033_154808458_154808604_154811246_154811357_154811512_154811641_154813886
transcript_164226.nic	chr5	+	3977	19	NIC	ENSG00000155506.19	novel	2128	14	NA	NA	-186	995	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	134.344499122385	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAAAACCCCCACCTAAT	154756968	False	NA	NA	False	CATAAA	-22	NA	154756987	154814915	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_154757291_154790324_154790387_154790644_154790711_154792621_154792797_154793594_154793724_154793799_154794001_154794099_154794263_154795174_154795320_154799590_154799760_154799872_154800043_154802006_154802400_154803289_154803414_154803539_154803746_154804200_154804308_154805880_154806033_154808458_154808604_154811246_154811357_154811512_154811641_154813886
transcript_164235.nic	chr5	+	4667	18	NIC	ENSG00000155506.19	novel	7181	19	NA	NA	-77	995	intron_retention	FALSE	canonical	3	357	junction_14	83.856649803477	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAAAACCCCCACCTAAT	154755223	False	NA	NA	False	CATAAA	-22	NA	154755299	154814915	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_154756194_154790324_154790387_154790644_154790711_154792621_154792797_154793594_154793724_154793799_154794263_154795174_154795320_154799590_154799760_154799872_154800043_154802006_154802400_154803289_154803414_154803539_154803746_154804200_154804308_154805880_154806033_154808458_154808604_154811246_154811357_154811512_154811641_154813886
transcript_164257.nic	chr5	+	2902	14	ISM	ENSG00000155506.19	ENST00000518297.6	7181	19	-74	13397	-74	0	5prime_fragment	FALSE	canonical	3	284	junction_6	98.4765613539317	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAGACAAGACACA	154755226	False	NA	NA	False	NA	NA	NA	154755302	154804208	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_154756194_154790324_154790387_154790644_154790711_154792621_154792797_154793594_154793724_154793799_154794001_154794099_154794263_154795174_154795320_154799590_154799760_154799872_154800043_154802006_154802400_154803289_154803414_154803539_154803746_154804200
transcript_164275.known	chr5	-	2947	9	FSM	ENSG00000170271.11	ENST00000326080.10	2947	9	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_4	3.56195171219375	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAGTGGATAATTTTTTT	-154850381	True	NA	-4	True	AATAAA	-15	NA	154850603	154818491	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_154820473_154821259_154821427_154822471_154822578_154823386_154823593_154830800_154830923_154834624_154834729_154834842_154834935_154838130_154838179_154850482
transcript_164278.known	chr5	+	2446	7	FSM	ENSG00000155508.14	ENST00000285896.11	2446	7	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_1	50.1431284757277	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGTTTGGTCTTTCATA	154855737	True	NA	14	True	AATAAA	-23	NA	154858626	154876792	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_154858769_154863206_154863396_154865191_154865386_154870660_154870823_154871729_154871875_154872540_154872652_154875289
transcript_164279.known	chr5	+	2604	7	FSM	ENSG00000155508.14	ENST00000403027.6	2604	7	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	133.578212627991	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGTTTGGTCTTTCATA	154856885	False	NA	14	True	AATAAA	-23	NA	154858516	154876792	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_154858817_154863206_154863396_154865191_154865386_154870660_154870823_154871729_154871875_154872540_154872652_154875289
transcript_164282.known	chr5	+	945	6	FSM	ENSG00000155508.14	ENST00000519404.5	945	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	157.58857826632	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTACTGTGCTGACTGT	154855762	True	NA	NA	False	NA	NA	NA	154858651	154875478	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_154858769_154863206_154863396_154865191_154865386_154871729_154871875_154872540_154872652_154875289
transcript_164283.known	chr5	+	923	6	FSM	ENSG00000155508.14	ENST00000520671.5	923	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	164.7074983114	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGCCTGATCCCAGAGTG	154855737	True	NA	NA	False	NA	NA	NA	154858626	154875458	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_154858769_154865191_154865386_154870660_154870823_154871729_154871875_154872540_154872652_154875289
transcript_164285.known	chr5	-	948	5	FSM	ENSG00000170271.11	ENST00000517448.5	948	5	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_4	2.27760839478607	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCGAAATACTCAATTCGAC	-154850368	True	NA	NA	False	TTTAAA	-12	NA	154850590	154830326	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_154830923_154834624_154834729_154834842_154834935_154838130_154838179_154850482
transcript_164287.known	chr5	+	2708	8	FSM	ENSG00000155508.14	ENST00000517876.5	2708	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	149.795506867032	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGTTTGGTCTTTCATA	154856620	True	NA	14	True	AATAAA	-23	NA	154858251	154876792	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_154858526_154858638_154858769_154863206_154863396_154865191_154865386_154870660_154870823_154871729_154871875_154872540_154872652_154875289
transcript_164288.known	chr5	-	5404	28	FSM	ENSG00000082516.9	ENST00000285873.8	5404	28	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_17	28.2139095369292	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATATTCCTAATTTTGCA	-154933625	True	NA	-3	True	ATTAAA	-26	NA	154938211	154887410	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_154888378_154889320_154889418_154891240_154891743_154892386_154892550_154896091_154896344_154898439_154898651_154899190_154899311_154901338_154901487_154902538_154902677_154903079_154903176_154904506_154904630_154905362_154905477_154907590_154907819_154911726_154911899_154912898_154913039_154916997_154917180_154917930_154918005_154919966_154920104_154921342_154921426_154924468_154924555_154925861_154926075_154927384_154927551_154928526_154928660_154931457_154931578_154932098_154932251_154935840_154936023_154937024_154937186_154937967
transcript_164295.nic	chr5	-	2340	16	ISM	ENSG00000082516.9	ENST00000285873.8	5404	28	-25	20338	-25	-16315	5prime_fragment	FALSE	canonical	3	135	junction_5	19.8691273643867	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCACCTTGAGAACTCCTG	NA	False	NA	NA	False	AAAAAG	-9	NA	154938236	154907748	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_154907819_154911726_154911899_154912898_154913039_154916997_154917180_154917930_154918005_154919966_154920104_154921342_154921426_154924468_154924555_154925861_154926075_154927384_154927551_154928526_154928660_154931457_154931578_154932098_154932251_154935840_154936023_154937024_154937186_154937967
transcript_164298.known	chr5	+	3162	7	FSM	ENSG00000082515.18	ENST00000522038.5	3162	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	711.257962267481	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAATCTTGGGTATTCTTT	154931715	True	NA	NA	False	ATTAAA	-21	NA	154941101	154969411	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_154941139_154941216_154941266_154950802_154950939_154956370_154956437_154957134_154957213_154959979_154960050_154966685
transcript_164300.known	chr5	+	3035	6	FSM	ENSG00000082515.18	ENST00000265229.12	3035	6	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_2	728.753291587764	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAATCTTGGGTATTCTTT	154931706	True	NA	NA	False	ATTAAA	-21	NA	154941092	154969411	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_154941139_154941216_154941266_154956370_154956437_154957134_154957213_154959979_154960050_154966685
transcript_164302.known	chr5	+	784	6	FSM	ENSG00000082515.18	ENST00000439747.7	784	6	0	0	0	0	multi-exon	FALSE	canonical	3	1831	junction_1	75.5476008884465	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAATGCTTTTTATGATTT	154931708	True	NA	13	True	AATAAA	-13	NA	154941094	154966966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_154941266_154950820_154950939_154956370_154956437_154957134_154957213_154959979_154960050_154966685
transcript_164303.known	chr5	-	2071	2	FSM	ENSG00000155868.8	ENST00000286317.6	2071	2	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGAGGGTTCTCTGGCT	-157139342	True	NA	NA	False	AATAAA	-39	NA	157142865	157137423	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_157139449_157142819
transcript_164304.known	chr5	-	1382	2	FSM	ENSG00000155868.8	ENST00000420343.1	1382	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATAGCAAAGTTTTCGT	-157139252	True	NA	NA	False	AGTAAA	-18	NA	157142775	157138441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_157139449_157142400
transcript_164318.nic	chr5	+	4543	31	NIC	ENSG00000055163.20	novel	6452	31	NA	NA	-29	0	combination_of_known_junctions	TRUE	canonical	3	85	junction_1	58.2096689181063	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAACAGGGCAGTGTGTG	NA	False	NA	NA	False	CATAAA	-19	NA	157266049	157393223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_157266585_157285338_157285479_157287018_157287109_157294782_157294861_157296672_157296775_157300714_157300897_157302793_157302891_157304237_157304367_157307760_157307866_157309742_157309835_157311663_157311782_157314343_157314464_157314968_157315095_157319761_157319929_157320654_157320803_157323920_157324075_157325481_157325639_157326170_157326268_157327972_157328050_157330741_157330851_157333326_157333447_157339056_157339257_157341069_157341158_157359004_157359149_157360281_157360373_157361467_157361599_157382589_157382663_157383264_157383360_157389188_157389428_157390520_157390669_157392832
transcript_164322.known	chr5	+	6452	31	FSM	ENSG00000055163.20	ENST00000620254.5	6452	31	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_10	29.4843838139597	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACTTGGTCTTGATTCCT	157262345	True	NA	16	True	ATTAAA	-25	NA	157266122	157395594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_157266196_157285338_157285479_157287018_157287109_157294782_157294861_157296672_157296775_157300714_157300897_157302793_157302891_157304237_157304367_157307760_157307866_157309742_157309835_157311663_157311782_157314343_157314464_157314968_157315095_157319761_157319929_157320654_157320803_157323920_157324075_157325481_157325639_157326170_157326268_157327972_157328050_157330741_157330851_157333326_157333447_157339056_157339257_157341069_157341158_157359004_157359149_157360281_157360373_157361467_157361599_157382589_157382663_157383264_157383360_157389188_157389428_157390520_157390669_157392832
transcript_164331.known	chr5	+	6370	30	FSM	ENSG00000055163.20	ENST00000521420.5	6370	30	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_3	71.4488416966011	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGGTCTTGATTCCTG	157262350	True	NA	17	True	ATTAAA	-26	NA	157266127	157395595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_157266196_157285338_157285479_157287018_157287109_157296672_157296775_157300714_157300897_157302793_157302891_157304237_157304367_157307760_157307866_157309742_157309835_157311663_157311782_157314343_157314464_157314968_157315095_157319761_157319929_157320654_157320803_157323920_157324075_157325481_157325639_157326170_157326268_157327972_157328050_157330741_157330851_157333326_157333447_157339056_157339257_157341069_157341158_157359004_157359149_157360281_157360373_157361467_157361599_157382589_157382663_157383264_157383360_157389188_157389428_157390520_157390669_157392832
transcript_164339.known	chr5	+	3673	28	FSM	ENSG00000055163.20	ENST00000435847.6	3673	28	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	74.6710940780254	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAACAGGGCAGTGTGTG	157262345	True	NA	NA	False	CATAAA	-19	NA	157266122	157393223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_157266196_157285338_157285479_157287018_157287109_157294782_157294861_157296672_157296775_157307760_157307866_157309742_157309835_157311663_157311782_157314343_157314464_157314968_157315095_157319761_157319929_157320654_157320803_157323920_157324075_157325481_157325639_157326170_157326268_157327972_157328050_157330741_157330851_157333326_157333447_157339056_157339257_157341069_157341158_157359004_157359149_157360281_157360373_157361467_157361599_157382589_157382663_157383264_157383360_157389188_157389428_157390520_157390669_157392832
transcript_164355.known	chr5	+	1294	8	FSM	ENSG00000055163.20	ENST00000622696.4	1294	8	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_3	20.8375641962455	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTGGGGAAGCAGGTGG	157262358	True	NA	NA	False	AATAAA	-21	NA	157266135	157304782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_157266196_157285338_157285479_157287018_157287109_157294782_157294861_157296672_157296775_157300714_157300897_157302793_157302891_157304237
transcript_164357.known	chr5	+	580	6	FSM	ENSG00000055163.20	ENST00000522637.5	580	6	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	143.606963619457	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGCTGCTGGCTGACATT	157262350	True	NA	NA	False	NA	NA	NA	157266127	157304274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_157266196_157285338_157285479_157287018_157287075_157300714_157300897_157302793_157302891_157304237
transcript_164364.known	chr5	+	2885	6	FSM	ENSG00000113272.14	ENST00000231198.12	2885	6	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_5	7.73045923603508	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTTTTTCATTTATTT	157730038	True	NA	5	True	AATAAA	-17	NA	157731419	157741449	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_157731632_157732867_157733045_157734575_157734746_157735845_157735935_157737886_157737995_157739320
transcript_164367.known	chr5	+	919	6	FSM	ENSG00000113272.14	ENST00000521655.1	919	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	45.2221184819995	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACACTGGTGCGAATGACA	157730038	True	NA	NA	False	NA	NA	NA	157731419	157739578	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_157731632_157732867_157733045_157734670_157734746_157735845_157735935_157737886_157737995_157739320
transcript_164369.known	chr5	+	6567	4	FSM	ENSG00000155858.6	ENST00000286307.6	6567	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	2.62466929133727	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTTGTCTCTGTTGAT	157743324	True	NA	8	True	AATAAA	-17	NA	157743711	157760709	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_157744199_157751389_157751530_157754003_157754088_157754853
transcript_164386.known	chr5	-	3952	12	FSM	ENSG00000113282.14	ENST00000411809.7	3952	12	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_2	157.433601378407	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTGTTTTAATTCTTT	-157843267	True	NA	NA	False	AGTAAA	-13	NA	157859145	157785746	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_157787993_157789362_157789514_157791702_157791996_157794897_157794973_157803649_157803720_157805865_157806113_157809627_157809806_157813062_157813228_157814184_157814294_157816733_157816831_157817442_157817548_157858929
transcript_164392.known	chr5	-	2346	12	FSM	ENSG00000113282.14	ENST00000523908.5	2346	12	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_2	132.906292720202	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTGAGACCATTGAAAGC	-157843265	True	NA	-107	True	NA	NA	NA	157859143	157787404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_157787993_157789362_157789568_157791702_157791996_157794897_157794973_157803649_157803720_157805865_157806113_157809627_157809806_157813062_157813228_157814184_157814294_157816733_157816831_157817442_157817548_157858929
transcript_164393.known	chr5	-	3987	12	FSM	ENSG00000113282.14	ENST00000523094.5	3987	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_11	257.688613422486	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTAATTCTTTCTCT	-157843267	True	NA	NA	False	AGTAAA	-17	NA	157859145	157785742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_157787993_157789362_157789568_157791702_157791996_157794897_157794973_157803649_157803720_157805865_157806113_157809627_157809806_157813062_157813228_157814184_157814294_157816733_157816831_157817442_157817548_157858952
transcript_164394.known	chr5	-	3344	12	FSM	ENSG00000113282.14	ENST00000530742.5	3344	12	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_11	260.422320709971	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGAACTGCTTTTTCTTT	-157843255	True	NA	-12	True	ATTAAA	-18	NA	157859133	157786286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_157787993_157789362_157789568_157791702_157791996_157794897_157794973_157803649_157803720_157805865_157806113_157809627_157809806_157813062_157813228_157814184_157814294_157816733_157816831_157817442_157817548_157859039
transcript_164418.nic	chr5	-	680	5	ISM	ENSG00000113282.14	ENST00000523908.5	2346	12	-54	25722	-52	-21369	5prime_fragment	FALSE	canonical	3	786	junction_2	51.3955250970354	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCAAAGAAGAACAAAGACAA	NA	False	NA	NA	False	AAGAAA	-1	NA	157859197	157813126	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_157813228_157814184_157814294_157816733_157816831_157817442_157817548_157858929
transcript_164422.known	chr5	-	3478	11	FSM	ENSG00000145860.12	ENST00000519865.5	3478	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_10	66.9179348157129	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTTTGTTCTTGTGGT	-159208061	False	35	-2	True	AATAAA	-18	NA	159208073	159157408	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_159159036_159161265_159161623_159162931_159163080_159168872_159169056_159169678_159169820_159173982_159174159_159176631_159176868_159181959_159182052_159194715_159194825_159203433_159203657_159207887
transcript_164423.known	chr5	-	3615	11	FSM	ENSG00000145860.12	ENST00000424310.7	3615	11	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_6	28.5965032827442	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTTTGTTCTTGTGGT	-159206994	True	NA	-2	True	AATAAA	-18	NA	159209553	159157408	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_159159036_159161265_159161623_159162931_159163080_159168872_159169056_159169678_159169820_159173982_159174159_159176631_159176868_159181959_159182052_159194715_159194825_159203433_159203657_159209230
transcript_164424.known	chr5	-	2603	11	FSM	ENSG00000145860.12	ENST00000518802.5	2603	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	66.9179348157129	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGGAAAGAAGGAGGCAGAA	NA	False	NA	NA	False	GATAAA	-16	NA	159210053	159158298	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_159159036_159161265_159161623_159162931_159163080_159168872_159169056_159169678_159169820_159173982_159174159_159176631_159176868_159181959_159182052_159194715_159194825_159203433_159203657_159209852
transcript_164425.nnic	chr5	-	3385	10	NIC	ENSG00000145860.12	novel	3615	11	NA	NA	7	0	intron_retention	FALSE	canonical	2	39	junction_9	58.3820960209761	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTTTGTTCTTGTGGT	-159206987	True	NA	-2	True	AATAAA	-18	NA	159209546	159157408	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_159159036_159161265_159161623_159162931_159163080_159168872_159169056_159169678_159169820_159173982_159174159_159176631_159176868_159181959_159182052_159194715_159194825_159209230
transcript_164426.known	chr5	-	2658	11	FSM	ENSG00000145860.12	ENST00000521606.6	2658	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	66.9179348157129	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAGGCAGAAGTGGAACT	-159208120	False	35	NA	False	GATAAA	-24	NA	159208132	159158290	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_159159036_159161265_159161623_159162931_159163080_159168872_159169056_159169678_159169820_159173982_159174159_159176631_159176868_159181959_159182052_159194715_159194825_159203433_159203657_159207884
transcript_164427.nic	chr5	-	929	5	ISM	ENSG00000145860.12	ENST00000611185.4	3624	12	18	19300	18	5247	intron_retention	FALSE	canonical	3	218	junction_3	21.0356839679626	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAAGTTCTCTATTTTCT	-159207021	True	NA	1	True	AATAAA	-22	NA	159209580	159176712	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_159176868_159181959_159182052_159194715_159194825_159203433_159203657_159209230
transcript_164429.known	chr5	-	1940	2	FSM	ENSG00000145860.12	ENST00000518284.1	1940	2	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTATGTTTTGTTCTTGTG	-159161546	False	NA	-4	True	AATAAA	-16	NA	159161580	159157410	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_159159036_159161265
transcript_164430.known	chr5	+	2179	11	FSM	ENSG00000164332.8	ENST00000296786.8	2179	11	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_8	16.4936351360153	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCGTTATCTGTTCTATA	159260742	True	NA	16	True	AATAAA	-16	NA	159263289	159286036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_159263361_159268869_159269070_159269907_159270000_159270359_159270446_159270527_159270644_159272022_159272122_159274584_159274623_159275147_159275247_159278237_159278355_159283211_159283340_159284903
transcript_164434.known	chr5	+	1441	8	FSM	ENSG00000113312.12	ENST00000231238.10	1441	8	0	0	0	0	multi-exon	FALSE	canonical	3	573	junction_1	77.8698547944857	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGGGTTAGGTTGTGAA	159996365	True	NA	22	True	AATAAA	-16	NA	160009138	160065543	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_160009194_160010499_160010859_160035139_160035201_160036690_160036804_160043132_160043170_160049513_160049663_160051128_160051184_160064931
transcript_164437.known	chr5	+	2208	7	FSM	ENSG00000113312.12	ENST00000682151.1	2208	7	0	0	0	0	multi-exon	FALSE	canonical	3	573	junction_1	84.1044324370336	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	159996351	True	NA	NA	False	NA	NA	NA	160009124	160052548	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_160009194_160010499_160010859_160035139_160035201_160036690_160036804_160043132_160043170_160049513_160049663_160051128
transcript_164439.known	chr5	+	1283	7	FSM	ENSG00000113312.12	ENST00000684018.1	1283	7	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_5	272.161563536563	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTCTGTGCTTAGGTC	159996358	True	NA	6	True	NA	NA	NA	160009131	160065527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_160009194_160010499_160010859_160035139_160035201_160036690_160036804_160043132_160043170_160051128_160051184_160064931
transcript_164449.known	chr5	-	3991	4	FSM	ENSG00000170234.13	ENST00000456329.7	3991	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	99.3210283206264	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGTTATTTAAAAATTAT	-160115609	True	NA	-4	True	AATAAA	-20	NA	160119423	160075881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_160078169_160080650_160080771_160093100_160094066_160118804
transcript_16445.known	chr1	+	1667	13	FSM	ENSG00000143224.18	ENST00000652473.1	1667	13	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	103.777673685411	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCAACTCTCATTCATGA	161164247	True	NA	-23	True	NA	NA	NA	161166466	161171176	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161166673_161166839_161166935_161167099_161167235_161167370_161167487_161167994_161168128_161168412_161168577_161168992_161169184_161169659_161169721_161169905_161170025_161170408_161170520_161170619_161170770_161170906_161170950_161171033
transcript_164455.known	chr5	-	1819	3	FSM	ENSG00000170234.13	ENST00000523662.1	1819	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	122.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATGAGATGAGGAGAAAAAT	-160115608	True	NA	-14	True	AATAAA	-17	NA	160119422	160077932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_160078169_160093100_160094066_160118804
transcript_164457.known	chr5	-	407	3	FSM	ENSG00000170234.13	ENST00000520662.1	407	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	8.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACGAAAAATGTACAGGGAA	-160115019	False	NA	NA	False	NA	NA	NA	160118833	160093757	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_160094066_160108544_160108615_160118804
transcript_164461.nic	chr5	+	440	2	ISM	ENSG00000113312.12	ENST00000682245.1	1615	3	-27	2729	-13	-2729	5prime_fragment	FALSE	canonical	3	573	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGAGAAACAGGTAAGTA	159996326	True	NA	38	True	AATAGA	-22	NA	160009099	160010845	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_160009194_160010499
transcript_164462.known	chr5	-	3373	2	FSM	ENSG00000170234.13	ENST00000307063.9	3373	2	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTGTGTGTTTCTCA	-160115636	True	NA	-2	True	AATAAA	-17	NA	160119450	160091338	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_160094066_160118804
transcript_164468.known	chr5	+	1366	7	FSM	ENSG00000113312.12	ENST00000684137.1	1366	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	284.046015442725	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCTGTGGTAATAAAAGC	159996353	True	NA	-10	True	NA	NA	NA	160009126	160065511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_160009194_160010499_160010859_160035139_160035201_160036690_160036804_160043132_160043170_160049513_160049663_160064931
transcript_164469.nic	chr5	+	563	5	ISM	ENSG00000170231.16	ENST00000393980.8	756	7	26346	19	-14	0	3prime_fragment	FALSE	canonical	3	51	junction_1	10.8714074525794	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGCTGCTCGCTCCAGAAC	160213122	True	NA	8	True	AATAAA	-16	NA	160213712	160238716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_160213820_160229545_160229625_160232097_160232274_160234819_160234910_160238605
transcript_164470.known	chr5	+	769	6	FSM	ENSG00000170231.16	ENST00000523955.5	769	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	31.4197390186488	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGCTGCTCGCTCCAGAAC	160213136	True	NA	8	True	AATAAA	-16	NA	160213726	160238716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_160213820_160228472_160228693_160229545_160229625_160232097_160232274_160234819_160234910_160238605
transcript_164478.known	chr5	-	3169	7	FSM	ENSG00000135083.17	ENST00000643539.1	3169	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	91.023196066839	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTGCTCTTGATCTCTC	-160309844	True	NA	-22	True	AATAAA	-5	NA	160312577	160251672	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_160253799_160255548_160255709_160259468_160259772_160274821_160274859_160280524_160280739_160311857_160311973_160312363
transcript_164479.known	chr5	-	3320	7	FSM	ENSG00000135083.17	ENST00000393977.7	3320	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	88.2263503092409	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGTCCTAGGCATCCC	-160309867	True	NA	-1	True	AATAAA	-26	NA	160312600	160251651	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_160253799_160255548_160255709_160259468_160259772_160276268_160276413_160280524_160280739_160311857_160311973_160312363
transcript_164482.nic	chr5	-	3698	7	NIC	ENSG00000135083.17	novel	3560	8	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	79.5244546594875	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTGATCTCTCACCTCT	NA	False	NA	-16	True	AATAAA	-11	NA	160312930	160251666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_160253799_160254128_160254336_160255548_160255709_160259468_160259772_160280524_160280739_160311857_160311973_160312363
transcript_164487.known	chr5	-	5709	6	FSM	ENSG00000135083.17	ENST00000257536.13	5709	6	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_3	23.1948270094864	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGATCTTTTATTTCTT	-160309831	True	NA	NA	False	ATTAAA	-16	NA	160312564	160249082	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_160253799_160255548_160255709_160259468_160259772_160280524_160280739_160311857_160311973_160312363
transcript_164495.nnic	chr5	-	2970	5	NIC	ENSG00000135083.17	novel	3320	7	NA	NA	-20	3	combination_of_known_splicesites	FALSE	canonical	3	12	junction_3	81.5567287230183	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATCTCTCACCTCTTGT	-160312599	False	NA	-13	True	AATAAA	-14	NA	160312620	160251663	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_160253799_160255548_160255709_160259468_160259772_160311857_160311973_160312363
transcript_164496.nnic	chr5	-	2832	5	NIC	ENSG00000135083.17	novel	3320	7	NA	NA	6	3	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	82.4348227389372	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATCTCTCACCTCTTGT	-160309838	True	NA	-13	True	AATAAA	-14	NA	160312571	160251663	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_160253799_160255548_160255709_160280524_160280739_160311857_160311973_160312363
transcript_164499.nic	chr5	-	3337	3	ISM	ENSG00000135083.17	ENST00000519673.1	940	6	-115	23444	9	2886	5prime_fragment	FALSE	canonical	3	164	junction_1	22	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGATAGACAGGAAGCAGAG	-160309858	True	NA	NA	False	NA	NA	NA	160312591	160277744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_160280739_160311857_160311973_160312363
transcript_164505.known	chr5	-	2385	3	FSM	ENSG00000145861.9	ENST00000393975.4	2385	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAACAAAAAAAAAA	-160370538	True	NA	NA	False	NA	NA	NA	160370641	160347779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_160349782_160354767_160355021_160370511
transcript_164507.known	chr5	-	2484	3	FSM	ENSG00000221886.4	ENST00000523213.1	2484	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTACTACTGCCTAGTT	-160398308	True	NA	-9	True	AATAAA	-17	NA	160400036	160393527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_160395540_160397441_160397516_160399638
transcript_164509.known	chr5	-	2808	2	FSM	ENSG00000221886.4	ENST00000408953.4	2808	2	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGTTTGTCATCTTTAA	-160398326	True	NA	-6	True	AATAAA	-17	NA	160400054	160393147	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_160395540_160399638
transcript_16451.known	chr1	+	1686	13	FSM	ENSG00000143224.18	ENST00000352210.9	1686	13	0	0	0	0	multi-exon	TRUE	canonical	3	70	junction_1	96.5471603241994	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTGGCTGTTCTAT	161164190	True	NA	19	True	AATAAA	-16	NA	161166409	161171218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161166612_161166839_161166935_161167099_161167235_161167370_161167487_161167994_161168128_161168431_161168577_161168992_161169184_161169659_161169721_161169905_161170025_161170408_161170520_161170619_161170770_161170906_161170950_161171033
transcript_164514.known	chr5	-	3480	16	FSM	ENSG00000164609.10	ENST00000297151.9	3480	16	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_10	24.2565913149853	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTTGTAGCATTATTTC	-160415827	True	NA	1	True	CATAAA	-20	NA	160419081	160401640	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_160403465_160404439_160404557_160404808_160404881_160405030_160405136_160406467_160406630_160407475_160407616_160407745_160407814_160407970_160408069_160408328_160408461_160408649_160408698_160412450_160412520_160413455_160413621_160413898_160413980_160414318_160414473_160415124_160415311_160419022
transcript_164518.nic	chr5	-	1611	15	ISM	ENSG00000164609.10	ENST00000297151.9	3480	16	-22	2866	-22	-1354	5prime_fragment	FALSE	canonical	3	174	junction_9	25.1076254779869	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGCATCGAAAGAGCA	-160415849	True	NA	NA	False	AAAAAG	-6	NA	160419103	160404506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_160404557_160404808_160404881_160405030_160405136_160406467_160406630_160407475_160407616_160407745_160407814_160407970_160408069_160408328_160408461_160408649_160408698_160412450_160412520_160413455_160413621_160413898_160413980_160414318_160414473_160415124_160415311_160419022
transcript_164522.nic	chr5	-	1561	14	ISM	ENSG00000164609.10	ENST00000297151.9	3480	16	-22	3168	-22	1540	5prime_fragment	FALSE	canonical	3	174	junction_8	22.6900911564143	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTGATAATCATTTGT	-160415849	True	NA	NA	False	NA	NA	NA	160419103	160404808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_160404881_160405030_160405136_160406467_160406630_160407475_160407616_160407745_160407814_160407970_160408069_160408328_160408461_160408649_160408698_160412450_160412520_160413455_160413621_160413898_160413980_160414318_160414473_160415124_160415311_160419022
transcript_164525.known	chr5	+	715	6	FSM	ENSG00000164611.13	ENST00000352433.10	715	6	0	0	0	0	multi-exon	FALSE	canonical	3	2919	junction_1	673.76001662313	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCCTAGTATTGTGGTT	160397282	True	NA	28	True	AATAAA	-16	NA	160421854	160428739	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_160421892_160422301_160422404_160422708_160422894_160424236_160424331_160427714_160427874_160428601
transcript_164527.known	chr5	+	895	6	FSM	ENSG00000164611.13	ENST00000520452.5	895	6	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	1750.39195610583	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTATTTGTATTAATAAA	160397331	True	NA	3	True	TTTAAA	-23	NA	160421903	160428704	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_160422156_160422301_160422404_160422708_160422894_160424236_160424331_160427714_160427874_160428601
transcript_164531.known	chr5	+	434	3	FSM	ENSG00000164611.13	ENST00000524244.5	434	3	0	0	0	0	multi-exon	FALSE	canonical	3	2919	junction_1	810.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGGTTAGCAAGCAGAGTA	160397282	True	NA	NA	False	NA	NA	NA	160421854	160423003	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_160421892_160422301_160422404_160422708
transcript_164532.known	chr5	+	1070	5	FSM	ENSG00000164611.13	ENST00000393964.1	1070	5	0	0	0	0	multi-exon	FALSE	canonical	3	3751	junction_4	394.274254168339	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCCTAGTATTGTGGTT	160397337	True	NA	28	True	AATAAA	-16	NA	160421909	160428739	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_160422404_160422708_160422894_160424236_160424331_160427714_160427874_160428601
transcript_164541.known	chr5	+	2366	8	FSM	ENSG00000113328.19	ENST00000393929.5	2366	8	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	1223.54516692691	1450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCCTTTGCTGGGTGGCTT	163430138	True	NA	13	True	AATAAA	-14	NA	163437570	163445014	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_163437665_163437764_163437805_163439256_163439521_163441077_163441332_163441885_163441965_163442044_163442144_163442373_163442569_163443673
transcript_164550.known	chr5	+	2444	7	FSM	ENSG00000113328.19	ENST00000340828.7	2444	7	0	0	0	0	multi-exon	FALSE	canonical	3	3201	junction_3	162.618162167289	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTGCTGGGTGGCTTTT	163430162	True	NA	15	True	AATAAA	-16	NA	163437594	163445016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_163437805_163439256_163439521_163441077_163441332_163441885_163441965_163442044_163442144_163442373_163442569_163443673
transcript_164560.known	chr5	-	448	4	FSM	ENSG00000170584.11	ENST00000517501.1	448	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	596.159001907675	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTAATCAGATAAACAGAT	-163450222	True	NA	NA	False	NA	NA	NA	163460055	163453922	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_163454051_163456928_163457006_163457561_163457611_163459861
transcript_164562.known	chr5	-	7967	4	FSM	ENSG00000170584.11	ENST00000302764.9	7967	4	0	0	0	0	multi-exon	FALSE	canonical	3	1220	junction_3	56.0971379741328	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCACTTGAGTCCAATTAA	-163450269	True	NA	NA	False	ATTAAA	-15	NA	163460102	163446525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_163454051_163456928_163457081_163457561_163457611_163459861
transcript_164564.nic	chr5	-	2080	4	NIC	ENSG00000170584.11	novel	7967	4	NA	NA	-302	341	combination_of_known_junctions	FALSE	canonical	3	129	junction_3	566.775087667057	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAATTGTGTACCCCTTT	NA	False	NA	-13	True	AATAAA	-11	NA	163460404	163453581	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_163454051_163456928_163457081_163457561_163457611_163458994
transcript_164565.nic	chr5	-	1718	4	NIC	ENSG00000170584.11	novel	7967	4	NA	NA	-272	341	combination_of_known_junctions	FALSE	canonical	3	90	junction_3	585.147844565799	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAATTGTGTACCCCTTT	NA	False	NA	-13	True	AATAAA	-11	NA	163460374	163453581	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_163454051_163456928_163457081_163457561_163457611_163459326
transcript_164567.known	chr5	-	652	3	FSM	ENSG00000170584.11	ENST00000521797.1	652	3	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	633	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTTGGGTGCAAGACCAA	-163459805	False	NA	NA	False	NA	NA	NA	163459836	163456987	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_163457081_163457561_163457611_163459326
transcript_164570.known	chr5	+	2988	18	FSM	ENSG00000072571.20	ENST00000358715.3	2988	18	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	124.189970564967	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTTTCAGCTTGTATT	163452171	True	NA	17	True	AATAAA	-26	NA	163460656	163491941	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_163460739_163463855_163463955_163464722_163464803_163467703_163467749_163469640_163469830_163471184_163471272_163471362_163471464_163473178_163473254_163473378_163473558_163474056_163474206_163475457_163475673_163478683_163478801_163482641_163482789_163483019_163483173_163483267_163483368_163484068_163484246_163490389_163490553_163491111
transcript_164573.known	chr5	+	2872	17	FSM	ENSG00000072571.20	ENST00000353866.7	2872	17	0	0	0	0	multi-exon	TRUE	canonical	3	207	junction_3	80.4879649388652	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTGATAATGCTCACTT	163460334	False	NA	NA	False	AAAACA	-27	NA	163460365	163491579	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_163460739_163463855_163463955_163464722_163464803_163469640_163469830_163471184_163471272_163471362_163471464_163473178_163473254_163473378_163473558_163474056_163474206_163475457_163475673_163478683_163478801_163482641_163482789_163483019_163483173_163483267_163483368_163484068_163484246_163490389_163490553_163491111
transcript_164577.nic	chr5	+	1634	14	ISM	ENSG00000072571.20	ENST00000393915.9	3016	18	0	8881	0	-8178	5prime_fragment	FALSE	canonical	3	240	junction_3	82.1100430617207	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAGAAATTAAAGAAATCACA	163452146	True	NA	NA	False	ACTAAA	-6	NA	163460631	163483060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_163460739_163463855_163463955_163464722_163464803_163467700_163467749_163469640_163469830_163471184_163471272_163471362_163471464_163473178_163473254_163473378_163473558_163474056_163474206_163475457_163475673_163478683_163478801_163482641_163482789_163483019
transcript_164578.nic	chr5	+	1731	14	ISM	ENSG00000072571.20	ENST00000393915.9	3016	18	7	8777	5	-8074	5prime_fragment	FALSE	canonical	3	240	junction_3	82.1100430617207	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGAAGGTAATCTATGAT	163452153	True	NA	4	True	AAAACA	-14	NA	163460638	163483164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_163460739_163463855_163463955_163464722_163464803_163467700_163467749_163469640_163469830_163471184_163471272_163471362_163471464_163473178_163473254_163473378_163473558_163474056_163474206_163475457_163475673_163478683_163478801_163482641_163482789_163483019
transcript_164584.nic	chr5	+	958	9	ISM	ENSG00000072571.20	ENST00000393915.9	3016	18	7	18384	5	2094	5prime_fragment	FALSE	canonical	3	240	junction_3	96.3832681278239	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTACAGTGTTTTATAGT	163452153	True	NA	NA	False	AAAAAG	-7	NA	163460638	163473557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_163460739_163463855_163463955_163464722_163464803_163467700_163467749_163469640_163469830_163471184_163471272_163471362_163471464_163473178_163473254_163473378
transcript_164587.nic	chr5	+	837	8	ISM	ENSG00000072571.20	ENST00000393915.9	3016	18	-51	18688	-51	1790	5prime_fragment	FALSE	canonical	3	240	junction_3	102.640645169525	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATATGAGCAGTAGCTTT	163460549	False	NA	NA	False	AATACA	-14	NA	163460580	163473253	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_163460739_163463855_163463955_163464722_163464803_163467700_163467749_163469640_163469830_163471184_163471272_163471362_163471464_163473178
transcript_164589.nic	chr5	+	711	7	ISM	ENSG00000072571.20	ENST00000393915.9	3016	18	0	20478	0	0	5prime_fragment	FALSE	canonical	3	240	junction_3	110.623485551467	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGAGTGAATGTGAAG	163452146	True	NA	NA	False	NA	NA	NA	163460631	163471463	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_163460739_163463855_163463955_163464722_163464803_163467700_163467749_163469640_163469830_163471184_163471272_163471362
transcript_164598.known	chr5	+	2226	7	FSM	ENSG00000038274.17	ENST00000280969.9	2226	7	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_1	108.294993215548	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAACTTACCACCCCATC	163503093	True	NA	18	True	AATAAA	-30	NA	163503113	163519336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_163503425_163512001_163512197_163513554_163513670_163513841_163513995_163516517_163516712_163517560_163517675_163518192
transcript_164601.known	chr5	+	2064	7	FSM	ENSG00000038274.17	ENST00000321757.11	2064	7	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_1	143.033115823652	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTAGAATGTTACAGTTAC	163500213	True	NA	36	True	AATAAA	-38	NA	163505618	163519354	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_163505750_163512001_163512197_163513554_163513670_163513841_163513995_163516517_163516712_163517560_163517675_163518192
transcript_164608.known	chr5	-	590	3	FSM	ENSG00000253978.2	ENST00000655017.1	590	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	6.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGACTTCCTAGTGCTT	-168269067	True	NA	-8	True	GATAAA	-21	NA	168269415	168229583	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_168229861_168230885_168231057_168269273
transcript_164610.known	chr5	+	3562	23	FSM	ENSG00000113645.15	ENST00000521089.5	3562	23	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_20	22.718225471965	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAACAGAAACAAAAAA	168292118	False	NA	-44	True	ATTAAA	-30	NA	168292149	168469216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_168292272_168371423_168371534_168385210_168385415_168397723_168397801_168399487_168399568_168406197_168406328_168408506_168408654_168409921_168409996_168414347_168414591_168422007_168422098_168423532_168424069_168428032_168428142_168428706_168428788_168430136_168430224_168431251_168431445_168441681_168441835_168444493_168444586_168453967_168454101_168455355_168455521_168460649_168460743_168464710_168464963_168467839_168467965_168468950
transcript_164611.known	chr5	+	7136	23	FSM	ENSG00000113645.15	ENST00000265293.9	7136	23	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_20	22.718225471965	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCATGTGTCTTTTCCA	168289647	True	NA	5	True	AATAAA	-18	NA	168291644	168472303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_168292272_168371423_168371534_168385210_168385415_168397723_168397801_168399487_168399568_168406197_168406328_168408506_168408654_168409921_168409996_168414347_168414591_168422007_168422098_168423532_168424069_168428032_168428142_168428706_168428788_168430136_168430224_168431251_168431445_168441681_168441835_168444493_168444586_168453967_168454101_168455355_168455521_168460649_168460743_168464728_168464963_168467839_168467965_168468950
transcript_164614.known	chr5	+	2122	15	FSM	ENSG00000113643.9	ENST00000231572.8	2122	15	0	0	0	0	multi-exon	FALSE	canonical	3	771	junction_4	64.9720897692201	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAATGTGGTTCTTTAACA	168477042	True	NA	28	True	AGTAAA	-19	NA	168486470	168519301	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_168486544_168488601_168488737_168492658_168492848_168493893_168494003_168494549_168494651_168495314_168495437_168497227_168497349_168500590_168500721_168502000_168502106_168506020_168506200_168506721_168506832_168510580_168510687_168516777_168516951_168517814_168518063_168519080
transcript_164616.known	chr5	+	1990	14	FSM	ENSG00000113643.9	ENST00000520013.5	1990	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	239.261734330404	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAAAATGTGGTTCTTTA	168477062	True	NA	25	True	AGTAAA	-16	NA	168486490	168519298	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_168486544_168488601_168488737_168492658_168492848_168494549_168494651_168495314_168495437_168497227_168497349_168500590_168500721_168502000_168502106_168506020_168506200_168506721_168506832_168510580_168510687_168516777_168516951_168517814_168518063_168519080
transcript_164618.nic	chr5	+	1502	12	ISM	ENSG00000113643.9	ENST00000231572.8	2122	15	-30	8623	-10	4648	5prime_fragment	FALSE	canonical	3	771	junction_4	48.2514077215104	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGACAAGGTAATTCAAAGC	168477012	True	NA	22	True	AAAAAG	-4	NA	168486440	168510678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_168486544_168488601_168488737_168492658_168492848_168493893_168494003_168494549_168494651_168495314_168495437_168497227_168497349_168500590_168500721_168502000_168502106_168506020_168506200_168506721_168506832_168510580
transcript_164622.known	chr5	+	757	3	FSM	ENSG00000113643.9	ENST00000524082.5	757	3	0	0	0	0	multi-exon	FALSE	canonical	3	840	junction_2	13.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCCAATTAAATATTTGAT	168477022	True	NA	NA	False	ATTAAA	-22	NA	168486450	168493187	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_168486544_168488601_168488737_168492658
transcript_164628.known	chr5	-	10274	7	FSM	ENSG00000120137.7	ENST00000239231.7	10274	7	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_6	19.0146142626022	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCCTTTTTATTATTT	-168573221	False	6147	-2	True	AATAAA	-20	NA	168579368	168548494	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_168557622_168559031_168559158_168561392_168561517_168563888_168564066_168566012_168566267_168568645_168568999_168579255
transcript_164637.known	chr5	+	645	1	FSM	ENSG00000233913.7	ENST00000522551.1	645	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTCCAATGTGCTGCCC	168616257	False	NA	NA	False	NA	NA	NA	168616351	168616996	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_168616400_168617000
transcript_164638.known	chr5	-	9716	36	FSM	ENSG00000184347.15	ENST00000519560.6	9716	36	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	3.85872983225923	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGCTCCACGGTGTCTG	-169300918	True	NA	NA	False	NA	NA	NA	169301139	168661739	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_168666690_168669782_168669992_168671197_168671484_168673176_168673332_168683965_168684097_168685686_168685928_168686978_168687117_168692606_168692701_168696291_168696432_168700581_168700680_168707975_168708101_168710894_168711059_168712282_168712355_168722255_168722328_168722932_168723005_168724415_168724485_168748301_168748435_168749471_168749636_168752954_168753099_168753863_168754008_168760861_168760937_168762538_168762690_168772780_168772945_168774234_168774379_168785906_168785979_168789559_168789632_168795506_168795579_168806445_168806588_168817299_168817464_168823259_168823332_168844583_168844656_168883264_168883337_169193478_169193551_169244704_169244777_169251387_169251460_169300512
transcript_164642.nic	chr5	+	2620	13	NIC	ENSG00000040275.17	novel	2529	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	14	junction_3	148.534975305107	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTACTCTCTATAGGTA	169576441	True	NA	38	True	AATAAA	-23	NA	169583755	169604778	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_169583890_169588393_169588576_169590755_169590830_169591047_169591225_169593353_169593549_169594144_169594295_169594393_169594493_169594570_169594682_169596560_169596702_169598475_169598580_169598971_169599160_169601279_169601626_169604059
transcript_164644.known	chr5	+	2529	12	FSM	ENSG00000040275.17	ENST00000265295.9	2529	12	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_6	38.8770046120236	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTACTCTCTATAGGTA	169576458	True	NA	38	True	AATAAA	-23	NA	169583772	169604778	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_169583890_169588393_169588576_169591047_169591225_169593353_169593549_169594144_169594295_169594393_169594493_169594570_169594682_169596560_169596702_169598475_169598580_169598971_169599160_169601279_169601626_169604059
transcript_164645.nic	chr5	+	2646	12	NIC	ENSG00000040275.17	novel	2529	12	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_7	112.011584406803	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTACTCTCTATAGGTA	169576317	True	NA	38	True	AATAAA	-23	NA	169583631	169604778	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_169583890_169588393_169588576_169591047_169591225_169593353_169593549_169594144_169594295_169594393_169594493_169594570_169594682_169596584_169596702_169598475_169598580_169598971_169599160_169601279_169601626_169604059
transcript_164646.nic	chr5	+	2783	12	NIC	ENSG00000040275.17	novel	2529	12	NA	NA	8	0	intron_retention	FALSE	canonical	3	16	junction_1	121.903362349306	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTACTCTCTATAGGTA	169576481	True	NA	38	True	AATAAA	-23	NA	169583795	169604778	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_169584167_169588393_169588576_169591047_169591225_169593353_169593549_169594144_169594295_169594393_169594493_169594570_169594682_169596560_169596702_169598475_169598580_169598971_169599160_169601279_169601626_169604059
transcript_164653.known	chr5	+	711	4	FSM	ENSG00000040275.17	ENST00000506574.5	711	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	221.102289047902	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGCACCTGGAGAAAT	169576321	True	NA	-71	True	ATTAAA	-9	NA	169583635	169591148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_169583890_169587198_169587373_169588393_169588576_169591047
transcript_164656.nic	chr5	+	612	3	ISM	ENSG00000040275.17	ENST00000510751.5	1617	8	-124	4959	-4	66	5prime_fragment	FALSE	canonical	3	409	junction_1	35	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGTTGGGATATCTGCG	169576317	True	NA	0	True	ACTAAA	-3	NA	169583631	169591219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_169583890_169588393_169588576_169591047
transcript_164657.known	chr5	+	340	3	FSM	ENSG00000040275.17	ENST00000629457.2	340	3	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_2	189.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATACCATGGAGCACATTTT	169576441	True	NA	NA	False	NA	NA	NA	169583755	169590779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_169583890_169588393_169588576_169590755
transcript_164658.known	chr5	+	6069	52	FSM	ENSG00000134516.19	ENST00000520908.7	6069	52	0	0	0	0	multi-exon	TRUE	canonical	2	12	junction_43	3.96679799730252	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTTGCCTGATTCTGT	169636861	True	NA	NA	False	AATAAA	-24	NA	169637274	170083382	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_169637370_169654402_169654487_169669287_169669329_169670541_169670598_169671077_169671175_169674296_169674446_169681743_169681880_169684195_169684351_169689251_169689334_169695802_169695939_169698373_169698450_169699381_169699459_169700013_169700140_169702302_169702428_169708168_169708268_169711934_169712008_169712119_169712224_169714027_169714212_169714359_169714458_169716212_169716303_169717383_169717485_169718656_169718792_169747395_169747505_169759704_169759776_169761518_169761626_169803057_169803207_169840756_169840853_169983067_169983167_169985827_169985923_169996085_169996165_170008496_170008598_170008687_170008747_170018959_170019109_170027862_170027949_170034398_170034556_170036514_170036556_170041054_170041146_170042012_170042133_170045815_170045906_170047509_170047615_170050255_170050398_170055304_170055387_170056683_170056769_170057579_170057667_170067509_170067687_170069136_170069221_170075946_170076085_170077709_170077838_170078974_170079147_170080162_170080284_170081841_170081985_170082795
transcript_164659.known	chr5	+	471	4	FSM	ENSG00000234511.10	ENST00000593851.5	471	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	3.39934634239519	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATGTTCTTGAAGGCTG	170232880	True	NA	NA	False	AATAAA	-18	NA	170232984	170246231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_170233008_170234114_170234199_170234976_170235071_170245961
transcript_164661.known	chr5	-	4742	4	FSM	ENSG00000145936.9	ENST00000274629.9	4742	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	2.49443825784929	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTAGTGCTTCCATCAT	-170389328	True	NA	NA	False	AATAAA	-16	NA	170389367	170374670	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_170378974_170383678_170383851_170385313_170385472_170389258
transcript_164663.known	chr5	+	3304	10	FSM	ENSG00000094755.17	ENST00000265294.9	3304	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	10.2354986248236	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGTGGTCATCTATACAA	170783140	True	NA	11	True	AATAAA	-26	NA	170783724	170814047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_170783875_170788573_170788669_170789128_170789248_170794230_170794299_170795207_170795426_170797465_170797549_170805715_170805854_170808599_170808753_170809567_170809756_170811955
transcript_164666.known	chr5	+	1567	9	FSM	ENSG00000094755.17	ENST00000519385.5	1567	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_8	7.08872343937891	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTCCCATGGAGCCCAAG	170783140	True	NA	NA	False	AATAGA	-36	NA	170783724	170812498	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_170783875_170788573_170788669_170789128_170789248_170794230_170794299_170795207_170795426_170797465_170797549_170805715_170805854_170808599_170808753_170811955
transcript_164676.nnic	chr5	-	1393	4	NNC	ENSG00000253348.1	novel	602	3	NA	NA	-3185	1675	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	4.71404520791032	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTAGTTTCTTGGTCTAT	-170760938	False	117	0	True	AATAGA	-18	NA	170761364	170745371	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_170746112_170746910_170747194_170757860_170757979_170761112
transcript_164681.known	chr5	+	1284	10	FSM	ENSG00000094755.17	ENST00000519598.1	1284	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	11.895636714338	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAGTTTTATATTAATAT	170783162	True	NA	NA	False	AAAACA	-13	NA	170783746	170810076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_170783875_170788573_170788669_170789128_170789248_170794230_170794299_170795207_170795426_170797465_170797549_170805715_170805854_170808599_170808753_170809567_170809756_170809982
transcript_164683.known	chr5	+	4558	29	FSM	ENSG00000204764.14	ENST00000522533.5	4558	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	17.581406864837	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCAGACTCATGTTTCT	170859226	True	NA	NA	False	AGTAAA	-26	NA	170862017	171300015	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_170862052_170878096_170878244_170881805_170881897_170892386_170892554_170896049_170896116_170909660_170909766_170910968_170911135_170914166_170914241_170916464_170916585_170918712_170918860_170919440_170919614_170924356_170924551_170953596_170953703_170968241_170968378_171028871_171028990_171170129_171170204_171171205_171171287_171183166_171183231_171183321_171183431_171199669_171199774_171205523_171205613_171213630_171213739_171221757_171221841_171240927_171241143_171242681_171242821_171265680_171265848_171293882_171293982_171295886_171296015_171298761
transcript_164684.known	chr5	+	4440	28	FSM	ENSG00000204764.14	ENST00000523189.6	4440	28	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_7	13.9310471276955	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCAGACTCATGTTTCT	170859226	True	NA	NA	False	AGTAAA	-26	NA	170862017	171300015	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_170862052_170878096_170878244_170881805_170881897_170892386_170892554_170896049_170896116_170909660_170909766_170910968_170911135_170914166_170914241_170916464_170916585_170918712_170918860_170919440_170919614_170924356_170924551_170953596_170953703_170968241_170968378_171170129_171170204_171171205_171171287_171183166_171183231_171183321_171183431_171199669_171199774_171205523_171205613_171213630_171213739_171221757_171221841_171240927_171241143_171242681_171242821_171265680_171265848_171293882_171293982_171295886_171296015_171298761
transcript_164686.known	chr5	+	1199	7	FSM	ENSG00000204764.14	ENST00000443155.5	1199	7	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_6	14.3643076176102	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAACTTTCAGACTTTCA	170859078	True	NA	NA	False	NA	NA	NA	170861869	170911409	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_170862052_170878096_170878244_170881805_170881897_170892386_170892554_170896049_170896116_170909660_170909766_170910968
transcript_164688.nnic	chr5	+	2572	6	NNC	ENSG00000204764.14	novel	2182	6	NA	NA	-9	-6247	at_least_one_novel_splicesite	TRUE	canonical	3	8	junction_5	27.7820085666965	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCCTTTTTTCACTTTAT	170859069	True	NA	NA	False	AATAAA	-22	NA	170861860	170905095	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_170862052_170878096_170878244_170881805_170881897_170892386_170892554_170896049_170896116_170903185
transcript_164689.known	chr5	+	2182	6	FSM	ENSG00000204764.14	ENST00000519130.5	2182	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_5	11.9063008529098	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAACAAGGACTGCACT	170859231	True	NA	NA	False	NA	NA	NA	170862022	170911342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_170862052_170878096_170878244_170881805_170881897_170892386_170892554_170896049_170896116_170909660
transcript_164692.known	chr5	+	1338	12	FSM	ENSG00000181163.14	ENST00000517671.5	1338	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	6262.79018693903	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACGGTTTCTATTGACTT	171387030	True	NA	12	True	AATAAA	-21	NA	171387115	171410883	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_171387235_171387932_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407699_171407775_171410526
transcript_164694.known	chr5	+	1913	12	FSM	ENSG00000181163.14	ENST00000678280.1	1913	12	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_10	7992.31038804443	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATGTGTTGTCCAAAAT	170933660	True	NA	NA	False	GATAAA	-22	NA	171387826	171410706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171406396_171407162_171407699_171407775_171410526
transcript_164695.known	chr5	+	1346	12	FSM	ENSG00000181163.14	ENST00000677357.1	1346	12	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_9	8314.60587915145	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTTCTATTGACTTATTT	170933676	True	NA	16	True	AATAAA	-25	NA	171387842	171410887	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407128_171407162_171407699_171407775_171410526
transcript_164701.known	chr5	+	2600	11	FSM	ENSG00000181163.14	ENST00000677467.1	2600	11	0	0	0	0	multi-exon	FALSE	canonical	3	1766	junction_9	6010.28371709689	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATAAAACTCAGTATTTT	170933660	True	NA	-16	True	AATATA	-6	NA	171387826	171410855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171406396_171407775_171410526
transcript_164702.known	chr5	+	1289	11	FSM	ENSG00000181163.14	ENST00000678774.1	1289	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	6541.10403525276	6670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTTAATAAAGTAGCAC	170933685	True	NA	-3	True	AATAAA	-6	NA	171387851	171410868	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392983_171400152_171400211_171400838_171400926_171405301_171405404_171407699_171407775_171410526
transcript_164708.known	chr5	+	1598	10	FSM	ENSG00000181163.14	ENST00000393820.2	1598	10	0	0	0	0	multi-exon	FALSE	canonical	3	1766	junction_9	6329.54348791697	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTCTTGCCTGTATCCA	170933684	True	NA	NA	False	NA	NA	NA	171387850	171407125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171406396
transcript_164709.known	chr5	+	1116	10	FSM	ENSG00000181163.14	ENST00000679006.1	1116	10	0	0	0	0	multi-exon	FALSE	canonical	3	19066	junction_5	1143.53805531369	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTAATGAAATGCATGAA	170933661	True	NA	NA	False	AATGAA	-18	NA	171387827	171407923	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407699
transcript_164711.known	chr5	+	3605	10	FSM	ENSG00000181163.14	ENST00000676625.1	3605	10	0	0	0	0	multi-exon	FALSE	canonical	3	19066	junction_5	1218.52367667489	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTTAATAAAGTAGCAC	170933661	True	NA	-3	True	AATAAA	-6	NA	171387827	171410868	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171407775_171410526
transcript_164712.known	chr5	+	1237	10	FSM	ENSG00000181163.14	ENST00000351986.10	1237	10	0	0	0	0	multi-exon	FALSE	canonical	3	848	junction_7	6494.67981894545	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGGTTTCTATTGACTTA	170933662	True	NA	13	True	AATAAA	-22	NA	171387828	171410884	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171405301_171405404_171407699_171407775_171410526
transcript_164713.known	chr5	+	1382	10	FSM	ENSG00000181163.14	ENST00000518587.2	1382	10	0	0	0	0	multi-exon	FALSE	canonical	3	20235	junction_9	888.46209198192	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTTAATAAAGTAGCAC	170933685	True	NA	-3	True	AATAAA	-6	NA	171387851	171410868	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407699_171407775_171410526
transcript_164726.known	chr5	+	1072	8	FSM	ENSG00000181163.14	ENST00000679233.1	1072	8	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_6	9308.3274391421	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTGACAATAATTTTGAA	170933676	True	NA	37	True	AATAAA	-26	NA	171387842	171406736	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171405301_171405404_171406396
transcript_164735.known	chr5	+	794	5	FSM	ENSG00000181163.14	ENST00000679190.1	794	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	9049.40515655587	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTTCTATTGACTTATTT	170933651	True	NA	16	True	AATAAA	-25	NA	171387817	171410887	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_171388007_171390050_171390131_171391304_171391413_171407718_171407775_171410526
transcript_164738.known	chr5	+	268	2	FSM	ENSG00000181163.14	ENST00000523339.1	268	2	0	0	0	0	multi-exon	FALSE	canonical	3	21912	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGATTTCAGCCTTTTA	170933685	True	NA	72	True	AATAAA	-12	NA	171387851	171390163	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_171388007_171390050
transcript_164739.known	chr5	+	640	2	FSM	ENSG00000181163.14	ENST00000524204.1	640	2	0	0	0	0	multi-exon	FALSE	canonical	3	20235	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGGTTTCTATTGACTTA	171407273	False	NA	13	True	AATAAA	-22	NA	171407492	171410884	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_171407775_171410526
transcript_164740.known	chr5	+	1998	5	FSM	ENSG00000156427.8	ENST00000274625.6	1998	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	2.48746859276655	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCGAGTGGTGGCTGGT	171419625	True	NA	NA	False	ATTAAA	-29	NA	171419646	171457626	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_171420232_171420406_171420444_171436092_171436274_171449146_171449254_171456538
transcript_164741.known	chr5	-	2099	14	FSM	ENSG00000072803.18	ENST00000523843.5	2099	14	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_12	54.5317886771685	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTAGCTTCCCCGGCTTCA	-171999763	True	NA	NA	False	NA	NA	NA	172006649	171863926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_171864102_171868609_171868797_171869728_171869808_171870747_171870859_171872871_171872991_171876284_171876535_171878010_171878130_171891466_171891605_171899003_171899095_171899913_171900101_171910571_171910798_171914342_171914406_171996889_171997052_172006457
transcript_164745.known	chr5	-	4539	13	FSM	ENSG00000072803.18	ENST00000296933.10	4539	13	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_12	36.4648803645371	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTCTGTTAAGAAATTTTT	-172006796	True	NA	-1	True	AATAAA	-18	NA	172006873	171861548	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_171864102_171868609_171868797_171869728_171869808_171870747_171870859_171872871_171872991_171876284_171876535_171878010_171878130_171891466_171891605_171899003_171899095_171899913_171900101_171910571_171910798_171914342_171914406_172006457
transcript_164749.nic	chr5	-	4299	13	NIC	ENSG00000072803.18	novel	2099	14	NA	NA	-22	-144	combination_of_known_junctions	FALSE	canonical	3	13	junction_11	54.0714547818183	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGACTTTTGTCCAGTAA	-171999795	True	NA	65	True	AATAAA	-11	NA	172006681	171861695	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_171864102_171868609_171868797_171869728_171869808_171870747_171870859_171872871_171872991_171876284_171876535_171878010_171878130_171891466_171891605_171899003_171899095_171899913_171900101_171910571_171910798_171996889_171997052_172006457
transcript_164751.known	chr5	-	2181	12	FSM	ENSG00000072803.18	ENST00000393802.6	2181	12	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_11	27.1326706791244	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTGTTGTATTAGGAAC	-171999764	True	NA	NA	False	NA	NA	NA	172006650	171863620	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_171864102_171868609_171868797_171869728_171869808_171870747_171870859_171872871_171872991_171876284_171876535_171878010_171878130_171891466_171891605_171899003_171899095_171899913_171900101_171910571_171910798_172006457
transcript_164761.nic	chr5	-	346	3	ISM	ENSG00000072803.18	ENST00000296933.10	4539	13	205	49177	-9	8	5prime_fragment	FALSE	canonical	3	72	junction_2	1	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTGTGTATTAAATATTT	-171999782	True	NA	15	True	AAAAAG	-6	NA	172006668	171910725	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_171910798_171914342_171914406_172006457
transcript_164763.nic	chr5	-	495	2	ISM	ENSG00000072803.18	ENST00000393802.6	2181	12	-230	47105	-7	8	5prime_fragment	FALSE	canonical	3	79	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTGTGTATTAAATATTT	-172006803	True	NA	15	True	AAAAAG	-6	NA	172006880	171910725	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_171910798_172006457
transcript_164765.known	chr5	-	5892	19	FSM	ENSG00000072786.13	ENST00000176763.10	5892	19	0	0	0	0	multi-exon	FALSE	canonical	2	71	junction_9	10.046957650189	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCGTTCAGGTTGTTCT	-172186817	True	NA	NA	False	AATAAA	-13	NA	172188224	172042078	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_172045023_172052928_172053043_172054568_172054695_172055587_172055777_172057348_172057474_172061138_172061269_172064719_172064813_172082325_172082506_172082960_172083085_172090231_172090363_172093411_172093961_172096425_172096561_172105655_172105738_172106619_172106815_172107779_172107853_172117480_172117631_172127372_172127422_172156623_172156789_172187886
transcript_164770.known	chr5	-	2988	3	FSM	ENSG00000168246.6	ENST00000393792.3	2988	3	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_2	11	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTGTCTTTGCCTTTA	-172283676	False	1756	-8	True	AAAAAG	-11	NA	172283764	172209645	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_172212228_172234121_172234359_172283595
transcript_164775.known	chr5	-	7779	13	FSM	ENSG00000174705.13	ENST00000311601.6	7779	13	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_3	19.3512847692917	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCAGTGTCTATGGATTT	-172446209	True	NA	-1	True	AATAAA	-36	NA	172454525	172333498	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_172339917_172346135_172346262_172347282_172347333_172350362_172350590_172353887_172354006_172358772_172358878_172362734_172362870_172373789_172373816_172382035_172382128_172394562_172394640_172406276_172406353_172422415_172422497_172454277
transcript_164782.known	chr5	+	6427	5	FSM	ENSG00000214357.9	ENST00000369800.6	6427	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.82915619758885	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTCAGAACTCAATTTTT	172640666	True	NA	30	True	AATACA	-26	NA	172641262	172691540	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_172641438_172669784_172670331_172683418_172684139_172686170_172686297_172686680
transcript_164783.known	chr5	-	2013	4	FSM	ENSG00000120129.6	ENST00000239223.4	2013	4	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	1.63299316185545	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAACGCTTTTATTTCTT	-172770330	True	NA	-4	True	AATAAA	-21	NA	172771195	172768095	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_172769133_172769574_172769795_172770160_172770307_172770585
transcript_164798.known	chr5	+	2903	10	FSM	ENSG00000113719.17	ENST00000393784.8	2903	10	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_8	27.9329001999479	845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGGTGTGATTCTTTC	172821371	True	NA	18	True	ATTAAA	-18	NA	172834250	172952683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_172834434_172888698_172888761_172897001_172897075_172909666_172909762_172914713_172914839_172924004_172924110_172926508_172926570_172932435_172932537_172935187_172935311_172950708
transcript_164819.known	chr5	+	586	6	FSM	ENSG00000113719.17	ENST00000523291.5	586	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	81.3668237059798	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGTTGCTGTTTCTTTCTT	172821531	True	NA	NA	False	NA	NA	NA	172834410	172920571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_172834434_172888698_172888761_172897001_172897075_172909666_172909762_172914713_172914839_172920363
transcript_164825.known	chr5	+	742	4	FSM	ENSG00000037241.7	ENST00000521476.5	742	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	442.362596369389	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCACATAGTATTTGCATT	172958688	True	NA	23	True	AATAAA	-20	NA	172958892	172969721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_172959008_172959864_172960042_172968458_172968600_172969412
transcript_164826.known	chr5	+	722	4	FSM	ENSG00000037241.7	ENST00000265100.6	722	4	0	0	0	0	multi-exon	FALSE	canonical	3	509	junction_1	213.674726837052	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCCTTTGCCAGTCTTTT	172950045	True	NA	17	True	AATAAA	-17	NA	172959423	172969771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_172959469_172959864_172960042_172968458_172968600_172969412
transcript_164827.known	chr5	+	679	4	FSM	ENSG00000037241.7	ENST00000519239.5	679	4	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	420.340602633415	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTCCACATAGTATTTGC	172950081	True	NA	20	True	AATAAA	-17	NA	172959459	172969718	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_172959515_172959864_172960042_172968458_172968600_172969412
transcript_164830.known	chr5	+	1419	4	FSM	ENSG00000113732.9	ENST00000519374.6	1419	4	0	0	0	0	multi-exon	FALSE	canonical	3	1297	junction_2	46.2625358386483	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTCATGGCTTTTTGAC	172973729	True	NA	NA	False	ATTAAA	-25	NA	172983770	173035445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_172983965_172994774_172994823_173020237_173020368_173034398
transcript_164831.known	chr5	+	718	3	FSM	ENSG00000113732.9	ENST00000519911.5	718	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	691.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAAATCTGGGCTCGGT	172973739	True	NA	22	True	AATAAA	-16	NA	172983780	173034884	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_172983965_172994774_172994823_173034398
transcript_164832.known	chr5	+	1660	4	FSM	ENSG00000164463.12	ENST00000520420.5	1660	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	4.54606056566195	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTAATTGGTTTTTCTA	173056193	True	NA	NA	False	ATTAAA	-21	NA	173056367	173091536	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_173056480_173080584_173080785_173086500_173086627_173090314
transcript_164835.known	chr5	+	1339	7	FSM	ENSG00000113734.18	ENST00000231668.13	1339	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	89.5812790462134	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGATTTTATTTAATAGA	NA	False	NA	-11	True	AAGAAA	-34	NA	173144441	173164340	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_173144630_173146865_173146959_173151565_173151695_173154321_173154414_173158743_173158846_173159932_173160052_173163724
transcript_164837.known	chr5	+	1168	6	FSM	ENSG00000113734.18	ENST00000351486.10	1168	6	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_3	11.7711511756497	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCTGGGAATGTGTGTT	173143178	True	NA	36	True	AATAAA	-23	NA	173144530	173164387	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_173144630_173146865_173146959_173154321_173154414_173158743_173158846_173159932_173160052_173163724
transcript_164839.known	chr5	-	1558	2	FSM	ENSG00000183072.10	ENST00000329198.5	1558	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGCACGTGTGCTTCTTT	-173235100	True	NA	-6	True	ATTAAA	-14	NA	173235206	173232108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_173233210_173234749
transcript_164840.known	chr5	-	4254	4	FSM	ENSG00000113739.11	ENST00000265087.9	4254	4	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_2	14.3372087784044	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCACTTGAGTAGCGTCAT	-173326166	True	NA	-34	True	AATAAA	-18	NA	173328414	173314722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_173318250_173323218_173323431_173325867_173326011_173328042
transcript_164843.known	chr5	-	1921	4	FSM	ENSG00000145919.11	ENST00000311086.9	1921	4	0	0	0	0	multi-exon	FALSE	canonical	3	665	junction_2	76.8678519712023	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGCCTTGGATAATATA	-173606999	True	NA	-39	True	NA	NA	NA	173616650	173607144	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_173608293_173609237_173609435_173613130_173613256_173616199
transcript_164844.known	chr5	-	1286	3	FSM	ENSG00000145919.11	ENST00000285908.5	1286	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	351.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCGAAGCTTCAGCTGAAG	-173606937	True	NA	-5	True	AATAAA	-39	NA	173616588	173607520	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_173608293_173613130_173613256_173616199
transcript_164845.known	chr5	-	850	3	FSM	ENSG00000145919.11	ENST00000477985.1	850	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	426	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGATAGCTTTAAAGTTG	-173616334	False	NA	NA	False	NA	NA	NA	173616358	173607798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_173608293_173609237_173609435_173616199
transcript_164847.known	chr5	-	814	2	FSM	ENSG00000145919.11	ENST00000480951.1	814	2	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAGAACATAGCCAGTCC	-173607002	True	NA	NA	False	GATAAA	-11	NA	173616653	173607932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_173608293_173616199
transcript_164850.known	chr5	-	3244	4	FSM	ENSG00000253686.2	ENST00000664033.1	3244	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2.16024689946929	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGATCCTTCTGCTACT	NA	False	NA	-36	True	AATATA	-1	NA	173746279	173708090	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_173710269_173711845_173711949_173718840_173719544_173746019
transcript_164853.known	chr5	+	9418	10	FSM	ENSG00000113742.14	ENST00000265085.10	9418	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	11.2194716101016	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAATGGGTCACCTTGTTT	173887786	True	NA	NA	False	AATAAA	-23	NA	173888348	173961980	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_173890859_173910522_173910605_173932449_173932501_173943025_173943050_173944966_173945141_173949507_173949598_173949959_173950079_173951823_173951939_173953090_173953273_173955909
transcript_164854.known	chr5	+	6705	9	FSM	ENSG00000113742.14	ENST00000334035.9	6705	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	11.399013115178	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTTTTAATATACTTAT	173888777	False	NA	8	True	AATAAA	-14	NA	173889339	173960309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_173890859_173910522_173910605_173943025_173943050_173944966_173945141_173949507_173949598_173949959_173950079_173951823_173951939_173953090_173953273_173955909
transcript_164857.known	chr5	+	1670	7	FSM	ENSG00000113742.14	ENST00000657000.1	1670	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	7.97217382873427	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGAGCTAGGTTTATTTT	173917522	True	NA	NA	False	AATAAA	-18	NA	173918200	173956845	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_173918255_173944966_173945141_173949507_173949598_173949959_173950079_173951823_173951939_173953090_173953273_173955909
transcript_164858.known	chr5	+	1188	2	FSM	ENSG00000120149.9	ENST00000507785.2	1188	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGCAGACGTAAAAATTCAA	174724499	True	NA	NA	False	AATAAA	-19	NA	174724601	174729880	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_174725068_174729158
transcript_164868.known	chr5	+	4066	11	FSM	ENSG00000164466.13	ENST00000321442.10	4066	11	0	0	0	0	multi-exon	FALSE	canonical	3	562	junction_10	71.5558523113239	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTCTTTTATTTGTACA	175468166	True	NA	NA	False	AATAAA	-18	NA	175478559	175529742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_175478640_175492094_175492268_175509031_175509203_175510108_175510208_175511450_175511527_175512110_175512197_175513462_175513591_175516613_175516664_175521918_175521969_175522374_175522423_175526637
transcript_164882.nic	chr5	+	985	7	ISM	ENSG00000164466.13	ENST00000321442.10	4066	11	-24	16004	-24	0	5prime_fragment	FALSE	canonical	3	678	junction_6	34.6586529199019	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAGTATGTGCAGTGGTG	175468142	True	NA	12	True	AATAAA	-15	NA	175478535	175513738	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_175478640_175492094_175492268_175509031_175509203_175510108_175510208_175511450_175511527_175512110_175512197_175513462
transcript_164884.known	chr5	+	637	5	FSM	ENSG00000164466.13	ENST00000502393.5	637	5	0	0	0	0	multi-exon	FALSE	canonical	3	713	junction_2	27.2247589521009	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTCTAAATCCCTCTATT	175468181	True	NA	NA	False	AATAAA	-26	NA	175478574	175511579	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_175478640_175492094_175492268_175509031_175509203_175510108_175510208_175511450
transcript_164891.known	chr5	+	592	3	FSM	ENSG00000164466.13	ENST00000508290.5	592	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	354	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAATTGAAGACAA	175468170	True	NA	NA	False	AAAACA	-31	NA	175478563	175509403	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_175478640_175492094_175492268_175509060
transcript_164895.nic	chr5	+	846	2	ISM	ENSG00000113749.8	ENST00000377291.2	2561	3	-316	3130	-316	-3130	5prime_fragment	FALSE	canonical	3	78	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGACACATTTTGGATCTG	NA	False	NA	NA	False	NA	NA	NA	175657713	175683112	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_175658156_175682708
transcript_164896.known	chr5	+	2561	3	FSM	ENSG00000113749.8	ENST00000377291.2	2561	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	39	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTTGCCACTCTTGGGT	175657509	True	NA	5	True	TATAAA	-29	NA	175658029	175686242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_175658156_175682708_175684310_175685408
transcript_164897.known	chr5	+	4597	4	FSM	ENSG00000145920.15	ENST00000393745.8	4597	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0.471404520791032	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCTGTCTGTGCTCTTC	175871512	True	NA	5	True	AAAAAG	-14	NA	175871577	175884021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_175871706_175878651_175878771_175878907_175879084_175879847
transcript_164900.nnic	chr5	-	1540	7	NNC	ENSG00000051596.10	novel	1601	6	NA	NA	-2	26	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	421.477032457154	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTGTCATTTTCCTTTT	-175944302	True	NA	NA	False	AGTAAA	-13	NA	175968317	175917846	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_175918173_175959919_175960133_175961050_175961152_175961272_175961435_175964950_175965156_175967110_175967268_175967941
transcript_164905.known	chr5	-	1601	6	FSM	ENSG00000051596.10	ENST00000265097.9	1601	6	0	0	0	0	multi-exon	FALSE	canonical	3	1048	junction_1	73.8013550011109	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCTAAGACTTTTAAAATT	-175944300	True	NA	-5	True	AATAAA	-22	NA	175968315	175959530	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_175960133_175961050_175961152_175961272_175961435_175964950_175965156_175967110_175967268_175967941
transcript_164907.known	chr5	-	1796	5	FSM	ENSG00000051596.10	ENST00000513482.1	1796	5	0	0	0	0	multi-exon	FALSE	canonical	3	1080	junction_2	66.0776058888335	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACCAGTTAATACTGGTA	-175944265	True	NA	NA	False	NA	NA	NA	175968280	175960218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_175961152_175961272_175961435_175964950_175965156_175967110_175967268_175967941
transcript_164910.known	chr5	+	3305	10	FSM	ENSG00000170085.18	ENST00000429602.7	3305	10	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_4	16.2100410887439	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAAGTTCAGTGTGACTC	176237946	True	NA	19	True	AATAAA	-21	NA	176238423	176345989	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_176238638_176289653_176290956_176295029_176295263_176296250_176296321_176313690_176313846_176322272_176322426_176324628_176324758_176336719_176336877_176337061_176337147_176345182
transcript_164914.known	chr5	+	2056	9	FSM	ENSG00000170085.18	ENST00000341199.10	2056	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	29.618142666278	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACCAAGTTCAGTGTG	NA	False	NA	15	True	AATAAA	-17	NA	176238366	176345985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_176238638_176295029_176295263_176296250_176296321_176313690_176313846_176322272_176322426_176324628_176324758_176336719_176336877_176337061_176337147_176345182
transcript_164921.known	chr5	-	2786	9	FSM	ENSG00000122203.15	ENST00000298569.9	2786	9	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_6	33.6839631724059	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTATTTTTTTGTCCT	-176355619	True	NA	-4	True	AATAAA	-22	NA	176361764	176346061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_176347809_176347920_176348064_176348249_176348357_176350612_176350738_176352621_176352749_176355570_176355750_176359480_176359568_176359810_176359919_176361601
transcript_164925.known	chr5	-	1243	8	FSM	ENSG00000122203.15	ENST00000510164.5	1243	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_7	194.409624352336	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTGGCTCACGCCTGTA	-176355616	True	NA	NA	False	TTTAAA	-17	NA	176361761	176347493	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_176347809_176347920_176348064_176348249_176348357_176350612_176350738_176352621_176352749_176355570_176355750_176359480_176359568_176361601
transcript_164926.known	chr5	-	2700	8	FSM	ENSG00000122203.15	ENST00000393725.6	2700	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	197.364368307836	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTATTTTTTTGTCCT	-176355620	True	NA	-4	True	AATAAA	-22	NA	176361765	176346061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_176347809_176347920_176348064_176348249_176348357_176350612_176350738_176352621_176352749_176355570_176355750_176359810_176359919_176361601
transcript_164933.known	chr5	-	2631	7	FSM	ENSG00000122203.15	ENST00000614420.4	2631	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	217.614656879744	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGGCTATTTTTTTGT	-176355662	True	NA	-7	True	AATAAA	-19	NA	176361807	176346064	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_176347809_176347920_176348064_176348249_176348357_176350612_176350738_176352621_176352749_176355570_176355750_176361601
transcript_164938.known	chr5	-	2452	6	FSM	ENSG00000122203.15	ENST00000620366.4	2452	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_5	233.602226016791	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGGCTATTTTTTTGT	-176355662	True	NA	-7	True	AATAAA	-19	NA	176361807	176346064	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_176347809_176347920_176348064_176348249_176348357_176350612_176350738_176352621_176352749_176361601
transcript_164940.nic	chr5	-	2419	6	NIC	ENSG00000122203.15	novel	2786	9	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_3	221.324738788957	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTATTTTTTTGTCCT	-176355683	True	NA	-4	True	AATAAA	-22	NA	176361828	176346061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_176347809_176347920_176348064_176348249_176348357_176359480_176359568_176359810_176359919_176361601
transcript_164945.known	chr5	-	2243	5	FSM	ENSG00000122203.15	ENST00000393728.6	2243	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	254.568261965234	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTATTTTTTTGTCCT	-176355594	True	NA	-4	True	AATAAA	-22	NA	176361739	176346061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_176347809_176347920_176348064_176348249_176348357_176359810_176359919_176361601
transcript_164948.known	chr5	-	1139	6	FSM	ENSG00000175416.16	ENST00000310418.9	1139	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	91.2302581384049	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTTTACACTTATTTAT	-176413732	True	NA	NA	False	NA	NA	NA	176416539	176392500	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_176392946_176396478_176396533_176397606_176397719_176397929_176398048_176410256_176410304_176416176
transcript_164951.known	chr5	-	1085	5	FSM	ENSG00000175416.16	ENST00000345807.7	1085	5	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	10.5445483544816	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTTTACACTTATTTAT	-176413732	True	NA	NA	False	NA	NA	NA	176416539	176392500	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_176392946_176397606_176397719_176397929_176398048_176410256_176410304_176416176
transcript_164952.known	chr5	+	10826	4	FSM	ENSG00000175414.7	ENST00000310389.6	10826	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	3.85861230093008	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGCTGCTTTTATCAAG	176364898	True	NA	3	True	AATAAA	-16	NA	176365486	176381909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_176365747_176366379_176366582_176368806_176368983_176371721
transcript_164961.known	chr5	-	881	5	FSM	ENSG00000048162.22	ENST00000614830.5	881	5	0	0	0	0	multi-exon	FALSE	canonical	3	996	junction_1	87.0875995765184	566	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCTGATGATTTTGTAT	-176370375	True	NA	-11	True	AATAAA	-15	NA	176388598	176383945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_176384375_176385220_176385328_176386839_176386910_176388234_176388344_176388432
transcript_164962.known	chr5	+	654	2	FSM	ENSG00000146066.3	ENST00000274787.3	654	2	0	0	0	0	multi-exon	FALSE	canonical	3	1224	junction_1	0	431	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTATCATCCCCATGGT	176376312	True	NA	21	True	AATAAA	-25	NA	176388750	176389761	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_176388974_176389330
transcript_164964.known	chr5	+	4485	11	FSM	ENSG00000113194.13	ENST00000261942.7	4485	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	110.700496837187	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACAGGCTGTGGATCTTTC	176440801	True	NA	26	True	ATTAAA	-22	NA	176448384	176510074	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_176448471_176479187_176479257_176486354_176486490_176488950_176489028_176492193_176492333_176493998_176494085_176494183_176494276_176496485_176496664_176498913_176499086_176500002_176500147_176506767
transcript_164973.nic	chr5	+	1219	8	ISM	ENSG00000113194.13	ENST00000261942.7	4485	11	-34	13088	-34	0	5prime_fragment	TRUE	canonical	0	0	junction_3	128.542853967548	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAAAAAATTAGCTAGGC	176440767	True	NA	NA	False	NA	NA	NA	176448350	176496986	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_176448471_176479187_176479257_176486354_176486490_176488950_176489028_176492193_176492333_176493998_176494085_176494183_176494276_176496485
transcript_164980.known	chr5	-	1647	11	FSM	ENSG00000146083.12	ENST00000513029.5	1647	11	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	45.055632278329	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGGGAGGGAGTGGCCCA	-176538015	False	NA	NA	False	NA	NA	NA	176538025	176528957	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_176529091_176529287_176529388_176529522_176529645_176529730_176529819_176530081_176530207_176530581_176530744_176530847_176531022_176531462_176531631_176532003_176532133_176532365_176532517_176537730
transcript_164981.known	chr5	-	4122	11	FSM	ENSG00000146083.12	ENST00000274811.9	4122	11	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_9	29.0406611494986	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACCGCCCACGCTGCCTTT	-176528395	True	NA	-17	True	AATAAA	-18	NA	176537402	176526711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_176529091_176529287_176529388_176529522_176529645_176529730_176529819_176530081_176530207_176530581_176530744_176530847_176531022_176531462_176531631_176532003_176532194_176532365_176532517_176536939
transcript_16499.nic	chr1	-	2136	9	NIC	ENSG00000158850.15	novel	1933	8	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_8	150.600827935971	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGCTCCTGCTTTCTGC	-161174421	True	NA	-20	True	AATAAA	-14	NA	161177517	161171311	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_161172090_161172226_161172332_161173604_161173728_161173858_161174050_161174992_161175229_161175807_161176075_161176433_161176580_161176911_161177107_161177422
transcript_164990.known	chr5	-	4234	2	FSM	ENSG00000169258.7	ENST00000303991.5	4234	2	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGTCTGCCGTGATTGG	-176609272	True	NA	-5	True	AATAAA	-13	NA	176610156	176595801	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_176599878_176609998
transcript_164992.nnic	chr5	-	1343	7	NNC	ENSG00000074317.11	novel	1383	7	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_6	42.7684333228245	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAGAGCCGCACCGGCAG	-176629840	True	NA	-6	True	AATAAA	-15	NA	176630552	176620209	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_176620844_176621213_176621304_176626397_176626517_176626719_176626762_176629533_176629664_176629808_176629864_176630279
transcript_164993.known	chr5	-	1383	7	FSM	ENSG00000074317.11	ENST00000310112.7	1383	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	45.043189150957	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGCCACCTCTGGCTTC	-176629652	False	NA	NA	False	NA	NA	NA	176630364	176620083	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_176620844_176621213_176621304_176626397_176626517_176626719_176626762_176629533_176629664_176629808_176629966_176630279
transcript_164994.known	chr5	-	1398	6	FSM	ENSG00000074317.11	ENST00000393693.7	1398	6	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_5	12.3190908755476	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCACCTCTGGCTTCGC	-176629822	True	NA	NA	False	NA	NA	NA	176630534	176620081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_176620844_176621213_176621304_176626397_176626517_176626719_176626762_176629533_176629664_176630279
transcript_164998.known	chr5	+	2361	9	FSM	ENSG00000048140.18	ENST00000515708.5	2361	9	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_8	93.5370915733432	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCATGTGTCTTGCATTTT	176643521	False	NA	17	True	AATAAA	-17	NA	176647567	176659053	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_176647703_176651615_176651667_176651753_176651901_176652742_176652914_176654894_176655021_176656077_176656126_176656699_176656817_176656894_176656925_176657517
transcript_164999.known	chr5	+	2475	9	FSM	ENSG00000048140.18	ENST00000508164.6	2475	9	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_8	39.648455203198	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCATGTGTCTTGCATT	176643437	True	NA	15	True	AATAAA	-15	NA	176647483	176659051	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_176647703_176651615_176651667_176651753_176651901_176652742_176652914_176654894_176655021_176656077_176656126_176656699_176656817_176656894_176656957_176657517
transcript_165003.known	chr5	+	1019	9	FSM	ENSG00000048140.18	ENST00000503045.5	1019	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	128.721356036984	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAATGACCACCTGGCT	176643514	False	NA	NA	False	CATAAA	-23	NA	176647560	176657732	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_176647703_176651615_176651667_176651753_176651901_176652811_176652914_176654894_176655021_176656077_176656135_176656699_176656817_176656894_176656957_176657517
transcript_165007.nic	chr5	+	3138	8	ISM	ENSG00000048140.18	ENST00000508164.6	2475	9	-102	0	-5	0	intron_retention	FALSE	canonical	3	284	junction_1	18.4003105563854	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCATGTGTCTTGCATT	176647288	False	NA	15	True	AATAAA	-15	NA	176647381	176659051	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_176647703_176651615_176651667_176651753_176651901_176652742_176652914_176654894_176655021_176656077_176656126_176656699_176656817_176656894
transcript_165011.nic	chr5	+	2451	8	NIC	ENSG00000048140.18	novel	2475	9	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_4	98.5635607626068	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCATGTGTCTTGCATT	176647288	False	NA	15	True	AATAAA	-15	NA	176647381	176659051	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_176647703_176651615_176651667_176651753_176651901_176652742_176652914_176656077_176656126_176656699_176656817_176656894_176656957_176657517
transcript_165012.known	chr5	+	4445	8	FSM	ENSG00000048140.18	ENST00000514705.5	4445	8	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_7	39.4280538268303	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCATGTGTCTTGCATTTT	176643450	True	NA	17	True	AATAAA	-17	NA	176647496	176659053	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_176647703_176651615_176651667_176651753_176651901_176652742_176655021_176656077_176656126_176656699_176656817_176656894_176656957_176657517
transcript_165013.known	chr5	+	884	8	FSM	ENSG00000048140.18	ENST00000504168.5	884	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	111.82475356648	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGCCGCCAGAGGCCAT	176643458	True	NA	NA	False	NA	NA	NA	176647504	176656956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_176647703_176651615_176651667_176651753_176651901_176652778_176652914_176654894_176655021_176656077_176656126_176656699_176656817_176656894
transcript_16502.nic	chr1	-	2157	9	NIC	ENSG00000158850.15	novel	2414	8	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_8	154.475271079225	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGCTCCTGCTTTCTGC	-161174421	True	NA	-20	True	AATAAA	-14	NA	161177517	161171311	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_161172090_161172226_161172332_161173604_161173728_161173858_161174050_161174992_161175229_161175807_161176096_161176433_161176580_161176911_161177107_161177422
transcript_165020.nic	chr5	+	2360	7	NIC	ENSG00000048140.18	novel	2475	9	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	107.319486684489	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCATGTGTCTTGCATT	176643354	True	NA	15	True	AATAAA	-15	NA	176647400	176659051	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_176647703_176652742_176652914_176654894_176655021_176656077_176656126_176656699_176656817_176656894_176656957_176657517
transcript_165024.known	chr5	+	707	6	FSM	ENSG00000048140.18	ENST00000507471.1	707	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	114.677983937633	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGTTCCTGCTGGGACT	176647609	False	NA	NA	False	NA	NA	NA	176647619	176657056	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_176647703_176652742_176652914_176654894_176655021_176656077_176656126_176656699_176656817_176656894
transcript_165037.known	chr5	+	560	2	FSM	ENSG00000248859.2	ENST00000512115.2	560	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTGCAAATGGCTAATTT	NA	False	NA	14	True	ATTAAA	-14	NA	176743204	176743871	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_176743443_176743549
transcript_165038.known	chr5	+	3941	16	FSM	ENSG00000113763.12	ENST00000509580.2	3941	16	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_6	16.8253776579705	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTGCTACTTCTCTCA	176810060	True	NA	11	True	AATAAA	-21	NA	176810518	176880898	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_176810821_176862623_176862846_176868129_176868274_176868560_176868665_176868783_176868965_176869613_176869782_176870369_176870535_176873967_176874157_176874263_176874567_176877191_176877280_176877534_176877704_176877893_176878128_176878243_176878394_176878474_176878640_176879309_176879489_176879720
transcript_165039.known	chr5	+	3733	15	FSM	ENSG00000113763.12	ENST00000329542.9	3733	15	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_9	6.96382782377506	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTGCTACTTCTCTCA	176810100	True	NA	11	True	AATAAA	-21	NA	176810558	176880898	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_176810821_176862623_176862846_176868129_176868274_176868560_176868665_176868783_176868965_176870369_176870535_176873967_176874157_176874263_176874567_176877191_176877280_176877534_176877704_176877893_176878128_176878243_176878394_176878474_176878640_176879309_176879489_176879720
transcript_165047.known	chr5	-	2570	15	FSM	ENSG00000087206.17	ENST00000377227.8	2570	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	57.3142518871856	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTCCTTCATGTTGC	-177004382	False	NA	35	True	AATAGA	-14	NA	177006408	176905004	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_176905493_176906010_176906048_176907113_176907178_176908522_176908695_176911310_176911390_176943334_176943489_176951473_176951578_176955958_176956036_176958092_176958155_176968554_176969292_176969600_176969707_176970741_176970867_176975395_176975481_176982468_176982624_177006283
transcript_165048.nic	chr5	-	2636	15	NIC	ENSG00000087206.17	novel	2574	15	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	50.9673765205524	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTATGTTTGTACGAAA	-177004751	True	NA	-13	True	TTTAAA	-2	NA	177006777	176905052	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_176905493_176906010_176906048_176907113_176907178_176908522_176908695_176911310_176911390_176943334_176943489_176951473_176951578_176955958_176956036_176958092_176958155_176968554_176969292_176969600_176969707_176970741_176970867_176975395_176975481_176982468_176982624_177006538
transcript_165049.known	chr5	-	2467	15	FSM	ENSG00000087206.17	ENST00000512031.5	2467	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	49.5072144814701	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTATGTTTGTACGAAA	-177004689	True	NA	-13	True	TTTAAA	-2	NA	177006715	176905052	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_176905493_176906010_176906048_176907113_176907178_176908522_176908695_176911310_176911390_176943334_176943489_176951473_176951578_176955958_176956036_176958092_176958155_176968554_176969292_176969596_176969707_176970741_176970867_176975395_176975481_176982468_176982624_177006649
transcript_165051.known	chr5	-	1945	15	FSM	ENSG00000087206.17	ENST00000506128.5	1945	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_9	62.1745813932717	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTTTGTACGAAATCT	-177004555	False	NA	-10	True	AATATA	-1	NA	177006581	176905049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_176905493_176906010_176906048_176907113_176907178_176908522_176908695_176911310_176911390_176943334_176943489_176951473_176951578_176955958_176956036_176958092_176958155_176969052_176969292_176969600_176969707_176970741_176970867_176975395_176975481_176982468_176982624_177006538
transcript_165069.known	chr5	-	425	5	FSM	ENSG00000087206.17	ENST00000507513.1	425	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	71.8240036478057	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGAGTGAGCAGGAAGC	-177004688	True	NA	NA	False	NA	NA	NA	177006714	176970831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_176970867_176975395_176975481_176982468_176982624_177001416_177001502_177006649
transcript_165080.known	chr5	+	2306	7	FSM	ENSG00000113761.12	ENST00000511834.5	2306	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	44.9468822302751	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCCAGACTACAACTTAACA	177019555	True	NA	10	True	AATAAA	-15	NA	177022731	177065965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177022914_177041125_177041230_177041777_177041871_177044388_177044534_177050702_177050937_177062057_177062152_177064511
transcript_165083.known	chr5	+	4314	7	FSM	ENSG00000113761.12	ENST00000358149.8	4314	7	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_5	19.9722029052603	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGGCTGAAAAAGGTATCA	177019519	True	NA	NA	False	AATAAA	-35	NA	177022695	177067985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177022914_177041125_177041230_177041777_177041871_177044388_177044534_177050750_177050937_177062057_177062152_177064511
transcript_165090.nic	chr5	+	2414	7	NIC	ENSG00000113761.12	novel	2774	9	NA	NA	-7	0	intron_retention	FALSE	canonical	3	19	junction_1	40.1196128263139	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCCAGACTACAACTTAACA	177022789	False	NA	10	True	AATAAA	-15	NA	177022896	177065965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_177023235_177041125_177041230_177041777_177041871_177044388_177044534_177050750_177050937_177062057_177062152_177064511
transcript_165093.nnic	chr5	+	2117	6	NIC	ENSG00000113761.12	novel	2306	7	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_4	43.4345484608739	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCCAGACTACAACTTAACA	177019510	True	NA	10	True	AATAAA	-15	NA	177022686	177065965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_177022914_177041125_177041230_177041777_177041871_177044388_177044534_177062057_177062152_177064511
transcript_165095.known	chr5	+	1622	6	FSM	ENSG00000113761.12	ENST00000508155.5	1622	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	52.8696510296786	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTGCTACCCTCGGCCCT	177019539	True	NA	NA	False	NA	NA	NA	177022715	177065458	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177022914_177041125_177041230_177041777_177041871_177050750_177050937_177062057_177062152_177064511
transcript_165102.known	chr5	+	977	5	FSM	ENSG00000113761.12	ENST00000513587.5	977	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	53.5414559010119	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTGGGGCAGGGCAGGA	177019558	True	NA	NA	False	NA	NA	NA	177022734	177065018	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177022914_177041125_177041230_177041777_177041871_177062057_177062152_177064511
transcript_165117.known	chr5	+	2733	18	FSM	ENSG00000160867.15	ENST00000393648.6	2733	18	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_10	139.446185872276	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGCGTCTTGACGGGAG	177079842	True	NA	-88	True	NA	NA	NA	177086904	177098022	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177087034_177089549_177089694_177090389_177090654_177090744_177090826_177090937_177091105_177091684_177091809_177092320_177092512_177092645_177092785_177093137_177093178_177093405_177093502_177093653_177093776_177095329_177095441_177095532_177095724_177096056_177096180_177096286_177096358_177096603_177096742_177097291_177097398_177097526
transcript_165121.known	chr5	+	2638	18	FSM	ENSG00000160867.15	ENST00000502906.5	2638	18	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_1	61.6054529559684	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACAGCCTGACACAGTGC	177079851	True	NA	NA	False	GGGGCT	-3	NA	177086913	177097732	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177087034_177089549_177089694_177090389_177090654_177090744_177090826_177090937_177091105_177091684_177091809_177092320_177092512_177092645_177092785_177093137_177093332_177093405_177093552_177093653_177093776_177095329_177095441_177095532_177095724_177096056_177096180_177096286_177096358_177096603_177096742_177097291_177097398_177097526
transcript_165129.known	chr5	+	3093	18	FSM	ENSG00000160867.15	ENST00000292408.9	3093	18	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	97.4215326162601	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCTGAGCAACATGGAGT	177079852	True	NA	34	True	AATAAA	-19	NA	177086914	177098144	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177087078_177089549_177089694_177090389_177090654_177090744_177090826_177090937_177091105_177091684_177091809_177092320_177092512_177092645_177092785_177093137_177093332_177093405_177093552_177093653_177093776_177095329_177095441_177095532_177095724_177096056_177096180_177096286_177096358_177096603_177096742_177097291_177097398_177097526
transcript_165151.nnic	chr5	+	2877	17	NIC	ENSG00000160867.15	novel	3093	18	NA	NA	-82	0	combination_of_known_splicesites	TRUE	canonical	3	14	junction_2	114.634047489173	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCTGAGCAACATGGAGT	NA	False	NA	34	True	AATAAA	-19	NA	177086822	177098144	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_177087034_177089549_177089694_177090744_177090826_177090937_177091105_177091684_177091809_177092320_177092512_177092645_177092785_177093137_177093332_177093405_177093552_177093653_177093776_177095329_177095441_177095532_177095724_177096056_177096180_177096286_177096358_177096603_177096742_177097291_177097398_177097526
transcript_16519.known	chr1	-	1933	8	FSM	ENSG00000158850.15	ENST00000319769.10	1933	8	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_6	61.881057732738	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCCTGCTTTCTGCAT	-161174411	True	NA	-18	True	AATAAA	-16	NA	161177507	161171309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_161172090_161172226_161172332_161173604_161173728_161173858_161174050_161174992_161175229_161175807_161176075_161176433_161176580_161177422
transcript_16522.known	chr1	-	1871	8	FSM	ENSG00000158850.15	ENST00000367998.5	1871	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	144.567052446473	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGCTCCTGCTTTCTGC	-161174401	True	NA	-20	True	AATAAA	-14	NA	161177497	161171311	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_161172090_161172226_161172332_161173604_161173728_161173858_161174050_161174992_161175229_161175807_161176096_161176433_161176509_161177422
transcript_165221.nnic	chr5	+	1330	6	FSM	ENSG00000165671.22	ENST00000508896.6	1436	6	-56	162	-56	-162	multi-exon	FALSE	canonical	3	58	junction_1	35.7860307941521	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGAAGTGATTCCATTAGTA	177131760	False	NA	NA	False	NA	NA	NA	177131773	177210291	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177131935_177135086_177135201_177135940_177136031_177191883_177192020_177204119_177204293_177209635
transcript_165222.nnic	chr5	+	1492	6	FSM	ENSG00000165671.22	ENST00000508896.6	1436	6	-56	0	-56	0	multi-exon	FALSE	canonical	3	58	junction_1	35.7860307941521	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTCTAGGTTTGCTGCCA	177131760	False	NA	NA	False	GATAAA	-1	NA	177131773	177210453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177131935_177135086_177135201_177135940_177136031_177191883_177192020_177204119_177204293_177209635
transcript_165228.nic	chr5	+	1369	6	ISM	ENSG00000165671.22	ENST00000689345.1	12113	24	-147	89860	-15	-162	5prime_fragment	FALSE	canonical	3	96	junction_1	20.6494551986245	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGAAGTGATTCCATTAGTA	177129011	True	NA	NA	False	NA	NA	NA	177133752	177210291	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_177133953_177135086_177135201_177135940_177136031_177191883_177192020_177204119_177204293_177209635
transcript_165229.nic	chr5	+	1531	6	ISM	ENSG00000165671.22	ENST00000689345.1	12113	24	-147	89698	-15	0	5prime_fragment	FALSE	canonical	3	96	junction_1	20.6494551986245	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTCTAGGTTTGCTGCCA	177129011	True	NA	NA	False	GATAAA	-1	NA	177133752	177210453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_177133953_177135086_177135201_177135940_177136031_177191883_177192020_177204119_177204293_177209635
transcript_165235.nnic	chr5	+	618	5	ISM	ENSG00000165671.22	ENST00000508896.6	1436	6	-56	6217	-56	-5832	5prime_fragment	FALSE	canonical	3	58	junction_1	38.9189863691232	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTACCTGTCCTTAGGAGA	177131760	False	NA	-10	True	NA	NA	NA	177131773	177204236	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_177131935_177135086_177135201_177135940_177136031_177191883_177192020_177204119
transcript_16524.known	chr1	-	2414	8	FSM	ENSG00000158850.15	ENST00000622395.4	2414	8	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_6	81.0202796482814	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCTCCTGCTTTCTGCA	NA	False	NA	-19	True	AATAAA	-15	NA	161177968	161171310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_161172090_161172226_161172332_161173604_161173728_161173858_161174050_161174992_161175229_161175807_161176096_161176433_161176580_161177422
transcript_165241.nic	chr5	+	668	5	ISM	ENSG00000165671.22	ENST00000510954.6	1706	7	-112	34969	-26	-5832	5prime_fragment	FALSE	canonical	3	96	junction_1	22.5319217999708	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTACCTGTCCTTAGGAGA	177129000	True	NA	-10	True	NA	NA	NA	177133741	177204236	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_177133953_177135086_177135201_177135940_177136031_177191883_177192020_177204119
transcript_165255.nnic	chr5	+	891	2	ISM	ENSG00000165671.22	ENST00000508896.6	1436	6	-56	74637	-56	-529	5prime_fragment	FALSE	canonical	3	58	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGCAAAGAAATGAAGTGG	177131760	False	NA	NA	False	NA	NA	NA	177131773	177135816	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_177131935_177135086
transcript_165256.nnic	chr5	+	1420	2	ISM	ENSG00000165671.22	ENST00000508896.6	1436	6	-56	74108	-56	0	intron_retention	FALSE	canonical	3	58	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGGTTTTGGCCTGCCAG	177131760	False	NA	NA	False	ATTAAA	-14	NA	177131773	177136345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_177131935_177135086
transcript_165257.known	chr5	+	470	2	ISM	ENSG00000165671.22	ENST00000689549.1	7734	20	0	149938	0	-919	5prime_fragment	FALSE	canonical	2	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGCCAATTGTTTGCACTT	177132997	False	NA	NA	False	AAAAAG	-16	NA	177133024	177135426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_177133155_177135086
transcript_165258.known	chr5	+	1414	2	FSM	ENSG00000165671.22	ENST00000602285.1	1414	2	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGGTTTTGGCCTGCCAG	177129056	True	NA	NA	False	ATTAAA	-14	NA	177133797	177136345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177133953_177135086
transcript_165276.known	chr5	-	1236	9	FSM	ENSG00000169228.14	ENST00000393611.6	1236	9	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_8	54.3179298206403	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCCCTTTCCCTGCTG	-177301319	True	NA	-5	True	AATAAA	-22	NA	177303706	177301450	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177301808_177301924_177301988_177302127_177302179_177302396_177302497_177302576_177302645_177302751_177302831_177303008_177303078_177303171_177303321_177303406
transcript_165277.known	chr5	-	1588	8	FSM	ENSG00000169228.14	ENST00000303251.11	1588	8	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_3	24.5381834898102	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGTTGGTCTGACTAGC	-177301332	True	NA	-28	True	AATAAA	-23	NA	177303719	177301197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177301808_177301924_177301988_177302127_177302179_177302396_177302497_177302576_177302645_177302751_177302831_177303008_177303078_177303171
transcript_165280.known	chr5	-	1820	7	FSM	ENSG00000169228.14	ENST00000478234.5	1820	7	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_5	20.2210011841375	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGTTGGTCTGACTAGC	-177301346	True	NA	-28	True	AATAAA	-23	NA	177303733	177301197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177301808_177301924_177301988_177302127_177302497_177302576_177302645_177302751_177302831_177303008_177303078_177303171
transcript_165292.known	chr5	+	1226	5	FSM	ENSG00000169230.10	ENST00000303204.9	1226	5	0	0	0	0	multi-exon	FALSE	canonical	3	5318	junction_1	188.750496688088	897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCCCCAGCTCTGGAGT	177254492	True	NA	16	True	AATAAA	-16	NA	177303798	177306949	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177304078_177304624_177304851_177305870_177305985_177306097_177306177_177306421
transcript_165293.known	chr5	+	1171	5	FSM	ENSG00000169230.10	ENST00000503216.5	1171	5	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_4	2287.75199431669	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCCCCAGCTCTGGAGT	177254514	True	NA	16	True	AATAAA	-16	NA	177303820	177306949	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177304078_177304624_177304851_177305870_177305985_177306097_177306177_177306454
transcript_165295.known	chr5	+	886	5	FSM	ENSG00000169230.10	ENST00000504594.5	886	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	2378.67582648414	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCTACGTGGTGGGTT	177254508	True	NA	21	True	ATTAAA	-21	NA	177303814	177306669	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177304078_177304624_177304851_177305914_177305985_177306097_177306177_177306421
transcript_16530.known	chr1	+	816	7	FSM	ENSG00000143224.18	ENST00000539753.5	816	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	158.409192353923	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTTGGGAAAACAGCTG	161164232	True	NA	NA	False	NA	NA	NA	161166451	161170949	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161166673_161166839_161166935_161167099_161167235_161169659_161169721_161170408_161170520_161170619_161170770_161170906
transcript_165303.known	chr5	-	1608	6	FSM	ENSG00000169228.14	ENST00000495458.5	1608	6	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_5	19.2603219080056	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGCCCCTTTCCCTGCT	-177301294	True	NA	-6	True	AATAAA	-21	NA	177303681	177301451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177301808_177301924_177301988_177302127_177302497_177302576_177302645_177302751_177302831_177303008
transcript_165304.known	chr5	-	1483	6	FSM	ENSG00000213347.11	ENST00000439742.7	1067	6	-411	-5	-411	3	multi-exon	FALSE	canonical	3	99	junction_5	9.2217135067188	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCCATAGTCTTGCCTAAT	-177311798	True	NA	-5	True	ATTAAA	-20	NA	177312309	177307204	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177307704_177307780_177307965_177310425_177310541_177310667_177310698_177311378_177311485_177311760
transcript_165305.known	chr5	-	1385	7	FSM	ENSG00000169228.14	ENST00000303270.6	1385	7	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_3	25.5652759291452	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCTGTAAATAAAATCAGT	-177301323	True	NA	-40	True	NA	NA	NA	177303710	177301485	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177301808_177301924_177301988_177302127_177302179_177302396_177302497_177302576_177302645_177302751_177302831_177303008
transcript_165327.nnic	chr5	-	1569	9	NNC	ENSG00000169223.15	novel	1611	8	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	881.366260061616	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGCCGTGTGACTGTCC	-177351626	False	NA	-34	True	AATAAA	-14	NA	177351685	177331566	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_177332247_177334283_177334404_177337135_177337251_177337362_177337525_177337705_177337786_177338487_177338606_177351172_177351292_177351451_177351564_177351622
transcript_165331.nnic	chr5	-	1182	9	NNC	ENSG00000169223.15	novel	1611	8	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	881.366260061616	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTTTGCTTCTTGCCCA	-177351626	False	NA	-9	True	AATAAA	-18	NA	177351685	177331953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_177332247_177334283_177334404_177337135_177337251_177337362_177337525_177337705_177337786_177338487_177338606_177351172_177351292_177351451_177351564_177351622
transcript_165336.known	chr5	-	1149	8	FSM	ENSG00000169223.15	ENST00000515209.5	1149	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	926.98849694556	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTACCGGGATTATAAAAG	-177325642	True	NA	-86	True	NA	NA	NA	177351647	177332030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177332270_177334283_177334404_177337135_177337251_177337362_177337525_177337705_177337786_177338487_177338606_177351172_177351292_177351451
transcript_165338.known	chr5	-	1611	8	FSM	ENSG00000169223.15	ENST00000303127.12	1611	8	0	0	0	0	multi-exon	FALSE	canonical	3	2417	junction_4	143.625931374753	1171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGCCGTGTGACTGTCC	-177325663	True	NA	-34	True	AATAAA	-14	NA	177351668	177331566	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177332247_177334283_177334404_177337135_177337251_177337362_177337525_177337705_177337786_177338487_177338606_177351172_177351292_177351451
transcript_165357.nnic	chr5	+	2291	15	NNC	ENSG00000169220.18	novel	1536	11	NA	NA	-3414	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	97.6588188437644	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTTGTCTTCCTTGTG	NA	False	NA	18	True	NA	NA	NA	177363013	177372596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_177363125_177365962_177365985_177366176_177366356_177366707_177366801_177366890_177367035_177367413_177367558_177367713_177367826_177368156_177368267_177368716_177368921_177370587_177370665_177370904_177371032_177371164_177371247_177371349_177371397_177371474_177371590_177371872
transcript_165363.nnic	chr5	+	1745	9	NIC	ENSG00000169220.18	novel	1536	11	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_1	72.1750259785197	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTTGTCTTCCTTGTG	177366001	True	NA	18	True	NA	NA	NA	177367298	177372596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_177367558_177368156_177368267_177368716_177368921_177370587_177370665_177370904_177371032_177371164_177371247_177371349_177371397_177371474_177371590_177371872
transcript_165368.known	chr5	+	2329	8	FSM	ENSG00000169220.18	ENST00000425155.6	2329	8	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	39.2698669335611	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTTGTCTTCCTTGTG	177366016	True	NA	18	True	NA	NA	NA	177367313	177372596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177368267_177368716_177368921_177370587_177370665_177370904_177371032_177371164_177371247_177371349_177371397_177371474_177371590_177371872
transcript_165369.known	chr5	-	553	1	FSM	ENSG00000196570.3	ENST00000358571.3	553	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGGCTGGCTCCTCCTCCA	-177400596	False	NA	NA	False	AATAAA	-13	NA	177400661	177400108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177400100_177400700
transcript_165373.nic	chr5	+	3102	16	NIC	ENSG00000198055.11	novel	2141	14	NA	NA	-467	-3	combination_of_known_junctions	TRUE	canonical	0	0	junction_1	135.201019062563	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATCCGCCCCTTCCTGTGT	177425970	True	NA	NA	False	AATAGA	-17	NA	177426028	177442622	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_177426620_177430871_177430968_177431994_177432108_177432232_177432311_177432705_177432807_177433146_177433240_177433346_177433411_177433535_177433677_177433913_177434105_177434901_177434940_177435031_177435122_177436072_177436282_177436392_177436531_177440699_177440838_177440918_177441054_177441736
transcript_165378.known	chr5	+	1789	16	FSM	ENSG00000198055.11	ENST00000355958.9	1789	16	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_15	103.866452716938	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCCCCACTCCCCCTGCCC	177419998	False	NA	NA	False	NA	NA	NA	177426842	177441353	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177426898_177430871_177430968_177431994_177432108_177432232_177432311_177432705_177432807_177433146_177433240_177433346_177433411_177433535_177433677_177433913_177434105_177434901_177434940_177435031_177435122_177436072_177436282_177436392_177436531_177440699_177440838_177440918_177441054_177441244
transcript_16538.known	chr1	+	813	6	FSM	ENSG00000143224.18	ENST00000544598.5	813	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	141.802679805425	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTGGCTGTTCTATCA	161164250	True	NA	21	True	AATAAA	-18	NA	161166469	161171220	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161166673_161166839_161166935_161167099_161167235_161170619_161170770_161170906_161170950_161171033
transcript_165380.known	chr5	+	3002	16	FSM	ENSG00000198055.11	ENST00000355472.10	3002	16	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_15	71.6369240607725	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTAGCCGCCCCTGCCTGCC	177419831	True	NA	93	True	NA	NA	NA	177426675	177442891	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177426898_177430871_177430968_177431994_177432108_177432232_177432311_177432705_177432807_177433146_177433240_177433346_177433411_177433535_177433677_177433913_177434105_177434901_177434940_177435031_177435122_177436072_177436282_177436392_177436531_177440699_177440838_177440918_177441054_177441736
transcript_165392.known	chr5	+	1660	13	FSM	ENSG00000198055.11	ENST00000507633.5	1660	13	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_2	24.3441756666536	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAGGATGGGTCTGGCT	177419900	True	NA	19	True	AATAAA	-22	NA	177426744	177436685	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177426898_177430871_177430968_177431994_177432108_177432232_177432311_177432705_177432807_177433146_177433240_177433346_177433411_177433535_177433677_177433913_177434105_177434901_177434940_177435031_177435122_177436072_177436282_177436392
transcript_165399.nic	chr5	-	1524	6	ISM	ENSG00000131187.10	ENST00000253496.4	2036	14	4826	0	243	0	intron_retention	FALSE	canonical	3	36	junction_5	31.7212862286509	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGAAAGCTCTTTTCTTC	-177404673	True	NA	-5	True	AATAAA	-19	NA	177404738	177402140	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_177402460_177402549_177402699_177403253_177403398_177403480_177403618_177403858_177404091_177404195
transcript_165402.known	chr5	+	1461	4	FSM	ENSG00000131188.12	ENST00000323249.8	1461	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	19.8158185969358	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGAGGGTGCACCGGCTGC	177446459	True	NA	11	True	AATAAA	-25	NA	177446813	177456286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177446961_177453955_177454041_177454828_177455495_177455723
transcript_165403.known	chr5	-	1573	4	FSM	ENSG00000131187.10	ENST00000510358.5	1573	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	12.2836838484589	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACTCAATAAAGTGCTTT	-177404407	False	NA	-36	True	NA	NA	NA	177404472	177402171	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177402460_177402549_177402699_177403253_177403398_177403480
transcript_165405.known	chr5	+	1345	3	FSM	ENSG00000131188.12	ENST00000502922.5	1345	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	15.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGGTTTGGTACAAGC	177446472	True	NA	-7	True	AATAAA	-7	NA	177446826	177456268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177446961_177454828_177455495_177455723
transcript_165406.nic	chr5	+	1368	2	ISM	ENSG00000131188.12	ENST00000510492.1	1285	3	6356	-18	6356	0	3prime_fragment	FALSE	canonical	3	44	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGAGGGTGCACCGGCTGC	177454464	True	NA	11	True	AATAAA	-25	NA	177454689	177456286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_177455495_177455723
transcript_165407.known	chr5	+	2571	16	FSM	ENSG00000198055.11	ENST00000528793.5	2571	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_15	122.277098791593	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGCCCCTTCCTGTGTGCG	177419998	False	NA	NA	False	AATAGA	-20	NA	177426842	177442625	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177426898_177430871_177430968_177431994_177432108_177432232_177432311_177432705_177432807_177433146_177433240_177433346_177433411_177433535_177433677_177433913_177434105_177434901_177434940_177435031_177435122_177436072_177436282_177436392_177436531_177440699_177440838_177440918_177441054_177441734
transcript_165411.known	chr5	-	3072	15	FSM	ENSG00000113758.14	ENST00000292385.9	3072	15	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_14	382.931362741978	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCCCTCCCCGCCCTTCT	-177473058	False	NA	-24	True	AATAAA	-26	NA	177473198	177456926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177457504_177457654_177457758_177458057_177458708_177459097_177459269_177460431_177460556_177460643_177460704_177466771_177466836_177466910_177467063_177467254_177467333_177467480_177467628_177467742_177467818_177468107_177468221_177468843_177468900_177472118_177472398_177472775
transcript_16543.known	chr1	+	816	5	FSM	ENSG00000143224.18	ENST00000497522.5	816	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	178.490020729451	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGGCGTCCTCTACCTTT	161164210	True	NA	NA	False	GGGGCT	-41	NA	161166429	161177041	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161166673_161166839_161166935_161167099_161167235_161170619_161170770_161176848
transcript_165437.known	chr5	-	2995	14	FSM	ENSG00000113758.14	ENST00000309007.9	2995	14	0	0	0	0	multi-exon	FALSE	canonical	3	966	junction_6	93.625655210575	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGCCGCCTGCCCTGACC	-177473601	False	NA	-39	True	AATAAA	-19	NA	177473741	177456607	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177457504_177457654_177457758_177458057_177458708_177459097_177459269_177460431_177460556_177460643_177460704_177466771_177466836_177466910_177467063_177467254_177467333_177467480_177467628_177467742_177467818_177468107_177468221_177468843_177468900_177473435
transcript_165438.known	chr5	-	2667	13	FSM	ENSG00000113758.14	ENST00000472831.5	2667	13	0	0	0	0	multi-exon	FALSE	canonical	3	966	junction_6	97.4016241593993	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGGGACCCCCTCCCCG	-177447954	True	NA	-31	True	AATAAA	-19	NA	177473624	177456933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177457504_177457654_177457758_177458057_177458708_177459097_177459269_177460431_177460556_177460643_177460704_177466771_177466836_177466910_177467063_177467254_177467333_177467480_177467818_177468107_177468221_177468843_177468900_177473435
transcript_165439.known	chr5	-	2701	15	FSM	ENSG00000113758.14	ENST00000393565.6	3024	15	-3	326	-3	-2	multi-exon	FALSE	canonical	0	0	junction_4	385.620312626558	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCCTGGGACCCCCTCCC	-177447967	True	NA	-33	True	AATAAA	-17	NA	177473637	177456935	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177457504_177457654_177457758_177458057_177458708_177459097_177459269_177459602_177459741_177460431_177460556_177460643_177460704_177466771_177466836_177466910_177467063_177467254_177467333_177467480_177467628_177467742_177467818_177468107_177468221_177468843_177468900_177473435
transcript_165440.known	chr5	-	1686	14	FSM	ENSG00000196923.14	ENST00000493815.5	1686	14	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_8	115.940864338975	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTGCCCTTCCCCTG	-177488849	True	NA	-6	True	AATAAA	-17	NA	177497561	177483393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177483731_177483866_177483983_177484069_177484191_177488067_177488249_177489392_177489628_177489770_177489833_177490869_177490907_177491009_177491147_177491403_177491421_177491806_177491926_177492404_177492436_177492525_177492678_177496416_177496524_177497527
transcript_165445.nic	chr5	-	2532	14	NIC	ENSG00000196923.14	novel	1686	14	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	125	junction_8	114.152964956168	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTGCCCTTCCCCTG	NA	False	NA	-6	True	AATAAA	-17	NA	177497646	177483393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_177483731_177483866_177483983_177484069_177484191_177488067_177488249_177489392_177489628_177489770_177490594_177490869_177490907_177491009_177491147_177491403_177491421_177491806_177491926_177492404_177492436_177492525_177492678_177496416_177496524_177497527
transcript_165452.nic	chr5	-	2250	13	NIC	ENSG00000196923.14	novel	1686	14	NA	NA	-40	0	intron_retention	FALSE	canonical	3	125	junction_8	120.610340214538	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTGCCCTTCCCCTG	NA	False	NA	-6	True	AATAAA	-17	NA	177497646	177483393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_177483731_177483866_177483983_177484069_177484191_177488067_177488249_177489392_177489628_177489770_177489833_177490869_177490907_177491009_177491147_177491403_177491421_177491806_177492436_177492525_177492678_177496416_177496524_177497527
transcript_165453.known	chr5	-	1567	13	FSM	ENSG00000196923.14	ENST00000359895.6	1567	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	146.883646317606	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTGCCCTTCCCCTG	-177488849	True	NA	-6	True	AATAAA	-17	NA	177497561	177483393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177483731_177483866_177483983_177484069_177484191_177488067_177488249_177489392_177489628_177489770_177489833_177490869_177490907_177491009_177491147_177491403_177491421_177492404_177492436_177492525_177492678_177496416_177496524_177497527
transcript_165455.known	chr5	-	1712	13	FSM	ENSG00000196923.14	ENST00000355841.7	1712	13	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_6	94.4952600222184	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTGCCCTTCCCCTG	-177488892	True	NA	-6	True	AATAAA	-17	NA	177497604	177483393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177483731_177483866_177483983_177484069_177484191_177488067_177488249_177489392_177489628_177489770_177489833_177490869_177490907_177491009_177491147_177491806_177491926_177492404_177492436_177492525_177492678_177496416_177496524_177497527
transcript_165459.known	chr5	-	1904	13	FSM	ENSG00000196923.14	ENST00000486828.6	1904	13	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	132.531416610888	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTTGTGTGCCCTTCC	-177488889	True	NA	-10	True	AATAAA	-13	NA	177497601	177483397	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177483731_177483866_177483983_177484069_177484191_177488067_177488249_177489392_177489628_177489770_177490032_177490869_177490907_177491009_177491147_177491806_177491926_177492404_177492436_177492525_177492678_177496416_177496524_177497527
transcript_165461.nic	chr5	-	3011	13	NIC	ENSG00000196923.14	novel	1686	14	NA	NA	-40	0	intron_retention	FALSE	canonical	3	125	junction_8	118.766899382315	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTGCCCTTCCCCTG	NA	False	NA	-6	True	AATAAA	-17	NA	177497646	177483393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_177483731_177483866_177483983_177484069_177484191_177488067_177488249_177489392_177489628_177489770_177490594_177490869_177490907_177491009_177491147_177491403_177491421_177491806_177492436_177492525_177492678_177496416_177496524_177497527
transcript_16547.known	chr1	+	2319	14	FSM	ENSG00000158864.13	ENST00000496553.6	2319	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	379.291616276335	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTAGGCCTAAACTTCTG	NA	False	NA	19	True	AATAAA	-16	NA	161201680	161214381	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161202481_161203402_161203544_161206406_161206598_161209192_161209314_161209482_161209596_161209856_161209932_161210110_161210189_161210303_161210390_161210590_161210711_161212350_161212481_161213379_161213476_161213648_161213733_161213863_161213922_161214155
transcript_16548.known	chr1	+	1508	13	FSM	ENSG00000158864.13	ENST00000677948.1	1508	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	494.778373505642	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTAGGCCTAAACTTCTG	161187268	True	NA	19	True	AATAAA	-16	NA	161202364	161214381	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161202481_161206406_161206598_161209192_161209314_161209482_161209596_161209842_161209932_161210110_161210189_161210303_161210390_161210590_161210711_161212350_161212481_161213379_161213476_161213648_161213733_161213863_161213922_161214155
transcript_165515.nic	chr5	-	1067	9	NIC	ENSG00000196923.14	novel	977	8	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	125	junction_3	143.544799191751	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTCTGCCTGTCTTCTA	NA	False	NA	-19	True	AATAAA	-15	NA	177497646	177490245	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_177490594_177490869_177490907_177491009_177491147_177491403_177491421_177491806_177491926_177492404_177492436_177492525_177492678_177496416_177496524_177497527
transcript_165524.known	chr5	-	977	8	FSM	ENSG00000196923.14	ENST00000355572.6	977	8	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_3	108.375951847149	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTCTGCCTGTCTTCTA	-177488861	True	NA	-19	True	AATAAA	-15	NA	177497573	177490245	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177490594_177490869_177490907_177491009_177491147_177491806_177491926_177492404_177492436_177492525_177492678_177496416_177496524_177497527
transcript_165539.known	chr5	-	2099	17	FSM	ENSG00000183258.12	ENST00000330503.12	2099	17	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_16	47.6339804525089	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGCCCTGCCTCTGTG	-177508085	True	NA	-12	True	ATTAAA	-19	NA	177516961	177511576	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177511928_177512095_177512207_177512321_177512394_177512495_177512646_177512779_177512877_177513010_177513083_177513352_177513485_177513684_177513848_177514700_177514838_177514915_177515070_177515185_177515259_177515684_177515822_177515928_177515990_177516118_177516194_177516287_177516448_177516724_177516836_177516918
transcript_16554.known	chr1	-	9777	9	FSM	ENSG00000158859.10	ENST00000367996.6	9777	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	7.9912061042123	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTCTTCCTTTGTCTGCT	-161197956	True	NA	-1	True	AATAAA	-21	NA	161199054	161184301	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_161191565_161192064_161192241_161193212_161193389_161193639_161193827_161193934_161194222_161195464_161195636_161196170_161196304_161196556_161196881_161197994
transcript_165544.known	chr5	-	2375	16	FSM	ENSG00000183258.12	ENST00000503078.5	2375	16	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_15	49.1960251330216	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTGGCCCTGCCTCTGT	-177508085	True	NA	-13	True	ATTAAA	-18	NA	177516961	177511577	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177511928_177512095_177512207_177512321_177512394_177512495_177512646_177512779_177512877_177513010_177513083_177513352_177513485_177513684_177513848_177514700_177514838_177514915_177515070_177515185_177515259_177515684_177515822_177515928_177515990_177516118_177516194_177516287_177516836_177516918
transcript_16555.known	chr1	-	1961	2	FSM	ENSG00000158859.10	ENST00000367995.3	1961	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGAACTCCTCTGTGT	-161197955	True	NA	NA	False	AATAAA	-16	NA	161199053	161195978	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_161196881_161197994
transcript_16556.known	chr1	+	2790	10	FSM	ENSG00000158882.15	ENST00000367988.8	2790	10	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	15.1053910742547	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAATGTTTCACCAACCC	161225436	True	NA	13	True	AGTAAA	-17	NA	161226059	161230746	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161226137_161226354_161226605_161226887_161226956_161227257_161227351_161227635_161227738_161227883_161227990_161228185_161228309_161228427_161228505_161228714_161228818_161228955
transcript_165571.known	chr5	-	2968	9	FSM	ENSG00000146067.16	ENST00000514747.6	2968	9	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	77.4167900070779	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCATGTTGGTGATTTG	-177552429	True	NA	1	True	GATAAA	-19	NA	177554563	177519788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177520182_177521973_177522072_177523956_177524033_177524184_177525206_177532442_177532642_177536357_177536746_177537872_177538108_177538904_177539148_177554248
transcript_165575.known	chr5	+	2546	5	FSM	ENSG00000184840.12	ENST00000332598.7	2546	5	0	0	0	0	multi-exon	FALSE	canonical	3	1478	junction_4	102.79713031014	1513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCTACTAAAAATACAAAAAA	177557867	True	NA	NA	False	NA	NA	NA	177592202	177597242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177592399_177592574_177592676_177593649_177593776_177594138_177594286_177595266
transcript_165577.known	chr5	+	1018	4	FSM	ENSG00000184840.12	ENST00000507723.1	1018	4	0	0	0	0	multi-exon	FALSE	canonical	3	1478	junction_3	117.83132954449	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGGCGTCACAACCCATC	177557936	True	NA	NA	False	NA	NA	NA	177592271	177595420	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177592399_177592574_177592676_177593649_177594286_177595266
transcript_165586.known	chr5	+	1064	6	FSM	ENSG00000027847.14	ENST00000505433.5	1064	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	70.6671069168676	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGAAGCCTGTACCTAC	177598176	True	NA	NA	False	NA	NA	NA	177600161	177609707	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177600261_177604178_177604542_177607282_177607528_177608538_177608623_177608909_177609015_177609539
transcript_165596.known	chr5	-	1805	4	FSM	ENSG00000246596.7	ENST00000500444.3	1805	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	1.24721912892465	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAACAACAATTATAAGATT	-177671438	False	NA	NA	False	NA	NA	NA	177672149	177626435	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_177626506_177627381_177627615_177631365_177632739_177672020
transcript_16561.nic	chr1	+	2538	10	NIC	ENSG00000158882.15	novel	2790	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	22.0756275863979	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGCAGTATCCAAATAC	161225436	True	NA	44	True	AATAAA	-26	NA	161226059	161230615	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_161226137_161226475_161226605_161226887_161226956_161227257_161227351_161227635_161227738_161227883_161227990_161228185_161228309_161228427_161228505_161228714_161228818_161228955
transcript_165611.known	chr5	+	1056	6	FSM	ENSG00000170089.16	ENST00000512851.5	1056	6	0	0	0	0	multi-exon	FALSE	canonical	3	650	junction_5	176.620044162603	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGGTTGTAGGGAGAGGA	NA	False	NA	NA	False	NA	NA	NA	177875594	177883831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_177875861_177876531_177876689_177878643_177878849_177882368_177882531_177882651_177882753_177883666
transcript_165613.nic	chr5	+	2501	5	ISM	ENSG00000170089.16	ENST00000506672.5	1570	6	-21	4	-21	0	intron_retention	FALSE	canonical	3	813	junction_1	123.65956291367	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCTAAGACTTTTAAAATT	NA	False	NA	29	True	AATAAA	-22	NA	177875500	177884268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_177875861_177876531_177876689_177878643_177878849_177882368_177882531_177882651
transcript_165614.nic	chr5	+	2937	5	ISM	ENSG00000170089.16	ENST00000506672.5	1570	6	-21	-432	-21	429	intron_retention	FALSE	canonical	3	813	junction_1	123.65956291367	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACATTCCTAGCACCAAGA	NA	False	NA	NA	False	AAAAAG	-18	NA	177875500	177884704	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_177875861_177876531_177876689_177878643_177878849_177882368_177882531_177882651
transcript_165636.known	chr5	+	5985	5	FSM	ENSG00000145911.6	ENST00000274605.6	5985	5	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_1	15.6903632845132	1053	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTAAGGAAGGATGCTTTA	178107350	True	NA	NA	False	AATAAA	-15	NA	178113531	178126081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_178113772_178119553_178119914_178120177_178120700_178121097_178121353_178121473
transcript_16564.known	chr1	+	2807	9	FSM	ENSG00000158882.15	ENST00000545897.5	2807	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	23.8455315520539	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTCAATGTTTCACCAAC	NA	False	NA	11	True	AGTAAA	-15	NA	161225938	161230744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161226137_161226354_161226605_161226887_161226956_161227257_161227351_161227883_161227990_161228185_161228309_161228427_161228505_161228714_161228818_161228955
transcript_165652.known	chr5	+	4066	12	FSM	ENSG00000145916.19	ENST00000515098.5	4066	12	0	0	0	0	multi-exon	TRUE	canonical	1	5	junction_2	183.763862129618	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATGGAGTCTCACTTTG	178130970	False	NA	4	True	ATTAAA	-15	NA	178130995	178150565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_178131055_178131236_178131377_178135172_178135313_178138107_178138259_178142582_178142729_178142851_178142993_178143626_178143728_178143941_178144109_178146113_178146280_178147532_178147636_178147728_178147884_178147968
transcript_165658.known	chr5	+	3911	11	FSM	ENSG00000145916.19	ENST00000313386.9	3911	11	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	99.4024647581739	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGAGTCTCACTTTGTTG	178126298	True	NA	7	True	ATTAAA	-18	NA	178131013	178150568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_178131055_178131236_178131377_178138107_178138259_178142582_178142729_178142851_178142993_178143626_178143728_178143941_178144109_178146113_178146280_178147532_178147636_178147728_178147884_178147968
transcript_165674.nic	chr5	+	2579	10	NIC	ENSG00000145916.19	novel	3911	11	NA	NA	-487	0	intron_retention	FALSE	canonical	3	441	junction_6	14.0870310727436	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTGCCCTTCTCATTT	NA	False	NA	12	True	NA	NA	NA	178130508	178148549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_178131377_178138107_178138259_178142582_178142729_178142851_178142993_178143626_178143728_178143941_178144109_178146113_178146280_178147532_178147636_178147728_178147884_178147968
transcript_165675.nic	chr5	+	4087	10	NIC	ENSG00000145916.19	novel	4066	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	441	junction_6	14.0870310727436	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATGGAGTCTCACTTTG	178126301	True	NA	4	True	ATTAAA	-15	NA	178131016	178150565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_178131377_178138107_178138259_178142582_178142729_178142851_178142993_178143626_178143728_178143941_178144109_178146113_178146280_178147532_178147636_178147728_178147884_178147968
transcript_165690.nic	chr5	+	2231	10	NIC	ENSG00000145916.19	novel	3911	11	NA	NA	-461	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	135.360241805814	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTGCCCTTCTCATTT	178130166	True	NA	12	True	NA	NA	NA	178130534	178148549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_178131055_178138107_178138259_178142582_178142729_178142851_178142993_178143626_178143728_178143941_178144109_178146113_178146280_178147532_178147636_178147728_178147884_178147968
transcript_16571.known	chr1	+	1120	8	FSM	ENSG00000158882.15	ENST00000492482.5	1120	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	25.6944367837214	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCTGCTACCAGCCCCAG	161225458	True	NA	NA	False	NA	NA	NA	161226081	161229293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161226137_161226354_161226605_161226887_161226956_161227883_161227990_161228185_161228309_161228427_161228505_161228714_161228818_161228955
transcript_165713.known	chr5	+	808	5	FSM	ENSG00000145916.19	ENST00000507457.5	808	5	0	0	0	0	multi-exon	FALSE	canonical	3	454	junction_2	6.04152298679729	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGGATTTCAAGCAGCC	178126309	True	NA	NA	False	NA	NA	NA	178131024	178143644	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_178131377_178138107_178138259_178142582_178142729_178142851_178142993_178143626
transcript_165718.known	chr5	-	780	4	FSM	ENSG00000145912.9	ENST00000274606.8	780	4	0	0	0	0	multi-exon	FALSE	canonical	3	5726	junction_2	248.741275670569	1083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGAGTCTGTGGGTGT	-178117989	True	NA	NA	False	AGTAAA	-15	NA	178153885	178149462	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_178149839_178150887_178150994_178153490_178153561_178153657
transcript_165719.known	chr5	-	475	3	FSM	ENSG00000145912.9	ENST00000511078.1	475	3	0	0	0	0	multi-exon	FALSE	canonical	3	5726	junction_1	42.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGGAGAGTGTGGGAAAGA	-178117998	True	NA	NA	False	NA	NA	NA	178153894	178150825	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_178150994_178153490_178153561_178153657
transcript_165720.known	chr5	-	599	3	FSM	ENSG00000145912.9	ENST00000314397.8	599	3	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_1	2741	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAATGCTAAGACTAAAAT	-178117933	True	NA	NA	False	ACTAAA	-30	NA	178153829	178149481	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_178149839_178153490_178153561_178153657
transcript_165721.known	chr5	-	566	2	FSM	ENSG00000145912.9	ENST00000510363.1	566	2	0	0	0	0	multi-exon	FALSE	canonical	3	5811	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGGGCTCCGCTCCTTGC	-178117988	True	NA	NA	False	AGTAAA	-30	NA	178153884	178153221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_178153561_178153657
transcript_165732.known	chr5	-	2081	13	FSM	ENSG00000175309.15	ENST00000308158.10	2081	13	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_9	18.1588285843431	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACCAGTAGTTTCACTTAA	-178230757	True	NA	NA	False	ATTAAA	-45	NA	178232802	178208470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_178208916_178211889_178211971_178212972_178213104_178214795_178214886_178215275_178215431_178222354_178222581_178222851_178222935_178224447_178224565_178224641_178224730_178225354_178225430_178229939_178230100_178231404_178231524_178232491
transcript_16575.known	chr1	+	2396	7	FSM	ENSG00000158882.15	ENST00000474486.5	2396	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	27.7828884187532	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGCAGTATCCAAATAC	161225436	True	NA	44	True	AATAAA	-26	NA	161226059	161230615	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161226137_161226354_161226605_161227883_161227990_161228185_161228309_161228427_161228505_161228714_161228818_161228955
transcript_165767.known	chr5	+	1747	8	FSM	ENSG00000197451.12	ENST00000506339.5	1747	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	648.8151209894	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCAAGCCTGGGTGAGT	178102732	True	NA	8	True	AATAAA	-9	NA	178204532	178211155	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_178204741_178204814_178205047_178205841_178206011_178206731_178206891_178207093_178207226_178209329_178209433_178210131_178210273_178210552
transcript_165774.known	chr5	+	1595	7	FSM	ENSG00000197451.12	ENST00000515193.5	1595	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	693.660339551474	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCAAGCCTGGGTGAGT	178102743	True	NA	8	True	AATAAA	-9	NA	178204543	178211155	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_178204741_178204814_178205047_178205841_178206011_178206731_178206891_178207093_178207226_178209329_178209433_178210552
transcript_16578.known	chr1	+	2636	9	FSM	ENSG00000158882.15	ENST00000367987.1	2636	9	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	13.683932183404	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCAGTATCCAAATACAGC	161225680	False	NA	47	True	AATAAA	-29	NA	161226303	161230618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161226605_161226887_161226956_161227257_161227351_161227635_161227738_161227883_161227990_161228185_161228309_161228427_161228505_161228714_161228818_161228955
transcript_165789.known	chr5	-	824	4	FSM	ENSG00000175309.15	ENST00000476170.2	824	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	42.2873766297015	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGTCCCATGTGTTCCA	-178230526	False	NA	NA	False	NA	NA	NA	178232571	178228124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_178228590_178229939_178230100_178231404_178231524_178232491
transcript_16579.known	chr1	+	1406	3	FSM	ENSG00000248485.2	ENST00000504449.2	1406	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATGTTTTTTTCTTGGGA	161258492	True	NA	NA	False	AATAAA	-32	NA	161258744	161285450	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161258984_161283667_161283723_161284338
transcript_165790.nic	chr5	+	540	3	ISM	ENSG00000197451.12	ENST00000514633.5	1571	7	-65	5235	-57	-982	5prime_fragment	FALSE	canonical	3	1445	junction_1	71.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTAAAAGACTATTTTAC	NA	False	NA	-37	True	NA	NA	NA	178204475	178205884	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_+_178204741_178204814_178205047_178205841
transcript_165794.known	chr5	+	1785	7	FSM	ENSG00000197451.12	ENST00000504898.5	1785	7	0	0	0	0	multi-exon	FALSE	canonical	3	1575	junction_5	173.722639732292	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAATTTAAAAACCCCCA	178102770	True	NA	-5	True	NA	NA	NA	178204570	178211142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_178205047_178205841_178206011_178206731_178206891_178207093_178207226_178209329_178209448_178210131_178210273_178210552
transcript_165795.known	chr5	+	1571	7	FSM	ENSG00000197451.12	ENST00000514633.5	1571	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	693.660339551474	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGCTATCCAAGCTTTT	178102740	True	NA	-28	True	NA	NA	NA	178204540	178211119	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_178204741_178204814_178205047_178205841_178206011_178206731_178206891_178207093_178207226_178209329_178209442_178210552
transcript_165796.known	chr5	+	1674	6	FSM	ENSG00000197451.12	ENST00000506259.5	1674	6	0	0	0	0	multi-exon	FALSE	canonical	3	787	junction_5	455.307544413663	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAACCCCCAAGCCTGG	178102747	True	NA	2	True	AATAAA	-3	NA	178204547	178211149	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_178205047_178205841_178206011_178206731_178206891_178207093_178207226_178209329_178209448_178210552
transcript_165798.known	chr5	-	2598	29	FSM	ENSG00000050767.18	ENST00000680889.1	2598	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_25	39.0630704039986	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAAAGATGGGATTTGGAG	-178577518	True	NA	NA	False	NA	NA	NA	178577549	178237475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_178238701_178239140_178239180_178242041_178242129_178242340_178242395_178245941_178245969_178246253_178246308_178246390_178246454_178247525_178247553_178247774_178247832_178248191_178248255_178249116_178249207_178250060_178250106_178252543_178252598_178254948_178255027_178256352_178256398_178256865_178256929_178257522_178257568_178259720_178259748_178261721_178261749_178262216_178262253_178263207_178263325_178267306_178267334_178268729_178268757_178270336_178270364_178288323_178288351_178290361_178290370_178306874_178306920_178560681_178560749_178577502
transcript_165799.known	chr5	-	2899	29	FSM	ENSG00000050767.18	ENST00000390654.8	2899	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_25	35.2161510662135	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTGTGCCTGTCCTTGTG	-178588967	True	NA	-4	True	AATAAA	-16	NA	178590393	178237617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_178238701_178239140_178239180_178242041_178242129_178242340_178242395_178245941_178245969_178246253_178246308_178246390_178246454_178247525_178247553_178247774_178247832_178248191_178248255_178249116_178249207_178250060_178250106_178252543_178252598_178254948_178255027_178256352_178256398_178256865_178256929_178257522_178257568_178259720_178259748_178261721_178261749_178262216_178262253_178263207_178263325_178267306_178267334_178268729_178268757_178270336_178270364_178288323_178288351_178290361_178290370_178306874_178306920_178560681_178560749_178589903
transcript_16580.known	chr1	-	366	2	FSM	ENSG00000158887.19	ENST00000488271.1	366	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGACAAGTGATCGCCACCC	-161305743	True	NA	NA	False	NA	NA	NA	161306190	161305694	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_161305978_161306107
transcript_165815.known	chr5	-	2504	13	FSM	ENSG00000113240.14	ENST00000316308.9	2504	13	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_9	24.4237759843423	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTTTGTTGTTGTTGTTCT	-178625302	True	NA	-5	True	CATAAA	-14	NA	178627050	178602663	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_178603758_178603843_178603935_178605302_178605383_178608375_178608459_178612415_178612546_178612795_178612891_178613472_178613640_178613726_178613844_178616881_178616949_178617343_178617435_178618555_178618779_178623255_178623417_178626945
transcript_165816.nic	chr5	-	2533	13	NIC	ENSG00000113240.14	novel	3722	13	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	20	junction_11	26.8373444207052	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGTTTGTTGTTGTTGTTC	-178625364	True	NA	-6	True	CATAAA	-13	NA	178627112	178602664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_178603758_178603843_178603935_178605302_178605383_178608375_178608459_178612415_178612546_178612795_178612891_178613472_178613640_178613726_178613844_178616881_178616949_178618555_178618779_178619837_178619897_178623255_178623417_178626945
transcript_16582.known	chr1	+	1308	6	FSM	ENSG00000143252.16	ENST00000367975.7	1308	6	0	0	0	0	multi-exon	FALSE	canonical	3	653	junction_1	97.4379802746342	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTAGAGAAACCAAGAAAAT	161306951	True	NA	12	True	ATTAAA	-31	NA	161314380	161363206	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161314426_161323613_161323671_161328395_161328498_161340593_161340656_161356676_161356841_161362328
transcript_165827.nic	chr5	-	2432	12	NIC	ENSG00000113240.14	novel	2504	13	NA	NA	-15	-1	combination_of_known_junctions	FALSE	canonical	3	53	junction_9	17.3538763621673	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGTTTGTTGTTGTTGTTC	-178625322	True	NA	-6	True	CATAAA	-13	NA	178627070	178602664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_178603758_178603843_178603935_178605302_178605383_178608375_178608459_178612415_178612546_178612795_178612891_178613472_178613640_178613726_178613844_178616881_178616949_178618555_178618779_178623255_178623417_178626945
transcript_16583.known	chr1	+	1127	5	FSM	ENSG00000143252.16	ENST00000342751.8	1127	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_4	321.826331272008	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTCTCCTTGAAATCT	161306951	True	NA	-5	True	ATTAAA	-14	NA	161314380	161363189	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161314426_161323613_161323671_161328395_161328498_161340593_161340656_161362328
transcript_165832.known	chr5	-	2521	5	FSM	ENSG00000169131.13	ENST00000335815.7	2521	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_4	23.5902522241709	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTCTTTTGTTCTAGTA	-178728098	True	NA	80	True	ATTAAA	-16	NA	178730659	178711511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_178713622_178725375_178725472_178726998_178727126_178728989_178729074_178730555
transcript_165838.known	chr5	-	766	4	FSM	ENSG00000169131.13	ENST00000520331.5	766	4	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_3	5.55777733351102	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGGATAAAAAGGGAAGTTT	-178726822	False	NA	NA	False	AAAAAG	-1	NA	178729383	178713472	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_178713622_178725375_178725472_178726998_178727126_178728989
transcript_16584.known	chr1	+	460	5	FSM	ENSG00000143252.16	ENST00000432287.6	460	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	347.199510368318	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACATTATTACATTCACC	161306952	True	NA	NA	False	AAGAAA	-24	NA	161314381	161362461	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161314426_161323613_161323671_161340593_161340656_161356676_161356841_161362328
transcript_165847.known	chr5	+	2794	5	FSM	ENSG00000178338.11	ENST00000322434.8	2794	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	11.4537111889553	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTCTCTTCTTTGTTGT	178858548	True	NA	-1	True	ATTAAA	-11	NA	178859952	178885020	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_178860128_178860996_178861081_178866243_178866371_178866975_178867072_178882708
transcript_165853.known	chr5	+	2332	5	FSM	ENSG00000178187.8	ENST00000320129.7	2332	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	6.75925291729789	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	178940221	True	NA	NA	False	NA	NA	NA	178941190	178966433	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_178941387_178942684_178942825_178946358_178946486_178946896_178946987_178964654
transcript_165858.known	chr5	+	2383	5	FSM	ENSG00000178187.8	ENST00000519564.2	2383	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	7.49583217528247	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	178940228	True	NA	NA	False	NA	NA	NA	178941197	178966433	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_178941445_178942684_178942825_178946358_178946486_178946896_178946987_178964654
transcript_165859.known	chr5	+	553	5	FSM	ENSG00000234284.7	ENST00000522442.1	553	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	14.6180539060437	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACTTTTCAGTAAAGTGT	179023070	True	NA	NA	False	CATAAA	-37	NA	179023803	179032352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_179023918_179024969_179025038_179027472_179027600_179028031_179028128_179032204
transcript_16586.known	chr1	+	369	4	FSM	ENSG00000143252.16	ENST00000513009.5	369	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	277.121313186522	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTTTTGTATTTTCAGAT	161306958	True	NA	NA	False	NA	NA	NA	161314387	161362540	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161314426_161323613_161323671_161340593_161340656_161362328
transcript_165863.known	chr5	+	5893	5	FSM	ENSG00000177932.7	ENST00000315475.7	5893	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	5.1234753829798	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTATCCATGAGGTGTG	179058679	True	NA	NA	False	NA	NA	NA	179060372	179083977	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_179060667_179062014_179062096_179076444_179076572_179077070_179077167_179078682
transcript_165865.known	chr5	-	4769	21	FSM	ENSG00000087116.16	ENST00000518335.3	4769	21	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_20	5.50545184340032	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTGGGTTTGGCAAGCTG	-179345194	True	NA	0	True	AATAAA	-27	NA	179345430	179120171	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_179121751_179122643_179122774_179124972_179125181_179125997_179126131_179127958_179128119_179129931_179130099_179132229_179132311_179132776_179132901_179135908_179136043_179137768_179137945_179139889_179140036_179152141_179152256_179153490_179153624_179154048_179154193_179154813_179154920_179158722_179158880_179181071_179181156_179207512_179207716_179272910_179273065_179343766_179344162_179345189
transcript_165867.known	chr5	-	2044	11	FSM	ENSG00000087116.16	ENST00000274609.5	2044	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_10	5.95399025864168	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCGGTGGCATTTAGTA	-179345194	True	NA	NA	False	AATAAA	-18	NA	179345430	179150887	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_179151201_179152141_179152256_179153490_179153624_179154048_179154193_179154813_179154920_179158722_179158880_179181071_179181156_179207512_179207716_179272910_179273065_179343766_179344162_179345189
transcript_16588.known	chr1	+	369	4	FSM	ENSG00000143252.16	ENST00000392169.6	369	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	402.54551157464	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGGAGGCTCCCAGCAT	161306958	True	NA	NA	False	GGGGCT	-14	NA	161314387	161362433	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161314426_161340593_161340656_161356676_161356841_161362328
transcript_165886.nnic	chr5	+	2874	19	NNC	ENSG00000176783.15	novel	2636	18	NA	NA	-6	0	at_least_one_novel_splicesite	TRUE	canonical	3	22	junction_8	67.4341242332924	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGGTGCGTGCAGAAGC	NA	False	NA	3	True	AATAAA	-15	NA	179550547	179610011	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_179550880_179560024_179560199_179562546_179562665_179567460_179567563_179569301_179569426_179577074_179577137_179580946_179581013_179585795_179585866_179586330_179586564_179589545_179589648_179591624_179591742_179593477_179593646_179594865_179594964_179596561_179596682_179598691_179598822_179601891_179601987_179605875_179605925_179607581_179607660_179609375
transcript_16589.known	chr1	+	571	7	FSM	ENSG00000143252.16	ENST00000504963.5	571	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	391.603115411509	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTTCCTACACATTATT	161306961	True	NA	NA	False	AAGAAA	-15	NA	161314390	161362452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161314426_161323613_161323671_161328395_161328498_161339561_161339589_161340593_161340656_161356676_161356841_161362328
transcript_165890.nic	chr5	+	2772	19	NIC	ENSG00000176783.15	novel	2636	18	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	71.2336834251956	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGGTGCGTGCAGAAGC	179549925	True	NA	3	True	AATAAA	-15	NA	179550557	179610011	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_179550880_179555649_179555791_179560024_179560199_179562546_179562665_179567460_179567563_179569301_179569426_179577074_179577137_179580946_179581013_179585795_179585866_179589545_179589648_179591624_179591742_179593477_179593646_179594865_179594964_179596561_179596682_179598691_179598822_179601891_179601987_179605875_179605925_179607581_179607660_179609375
transcript_165897.known	chr5	+	2636	18	FSM	ENSG00000176783.15	ENST00000319449.9	2636	18	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	31.8263019342444	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGTGCGTGCAGAAGCT	179549921	True	NA	4	True	AATAAA	-16	NA	179550553	179610012	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_179550880_179560024_179560199_179562546_179562665_179567460_179567563_179569301_179569426_179577074_179577137_179580946_179581013_179585795_179585866_179589545_179589648_179591624_179591742_179593477_179593646_179594865_179594964_179596561_179596682_179598691_179598822_179601891_179601987_179605875_179605925_179607581_179607660_179609375
transcript_16590.nic	chr1	+	1300	6	NIC	ENSG00000081721.12	novel	1330	6	NA	NA	-7	-78	combination_of_known_junctions	FALSE	canonical	3	207	junction_1	77.2631865767909	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACTGTCTGTGTTTCATA	161745325	True	NA	43	True	ATTAAA	-15	NA	161749750	161757160	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_161750146_161751654_161751782_161751865_161751985_161752367_161752465_161753074_161753262_161756785
transcript_165902.known	chr5	+	2454	18	FSM	ENSG00000176783.15	ENST00000393438.6	2454	18	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	49.4023800611807	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGTGCGTGCAGAAGCT	179559347	False	NA	4	True	AATAAA	-16	NA	179559691	179610012	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_179559836_179560024_179560199_179562546_179562665_179567460_179567563_179569301_179569426_179577074_179577137_179580946_179581013_179585795_179585866_179589545_179589648_179591624_179591742_179593477_179593646_179594865_179594964_179596561_179596682_179598691_179598822_179601891_179601987_179605875_179605925_179607581_179607660_179609375
transcript_165904.nic	chr5	+	2575	17	NIC	ENSG00000176783.15	novel	2636	18	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_6	60.7112788120955	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGGTGCGTGCAGAAGC	NA	False	NA	3	True	AATAAA	-15	NA	179550547	179610011	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_179550880_179560024_179560199_179562546_179562665_179567460_179567563_179569301_179569426_179577074_179577137_179585795_179585866_179589545_179589648_179591624_179591742_179593477_179593646_179594865_179594964_179596561_179596682_179598691_179598822_179601891_179601987_179605875_179605925_179607581_179607660_179609375
transcript_16591.known	chr1	+	1330	6	FSM	ENSG00000081721.12	ENST00000367943.5	1330	6	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_1	66.3246560488632	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTATGTACAAAAATTTGA	161745360	True	NA	121	True	NA	NA	NA	161749785	161757238	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161750146_161751667_161751782_161751865_161751985_161752367_161752465_161753074_161753262_161756785
transcript_165911.known	chr5	+	2642	17	FSM	ENSG00000176783.15	ENST00000437570.6	2642	17	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_7	26.6398872698441	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGGTGCGTGCAGAAGC	179559347	False	NA	3	True	AATAAA	-15	NA	179559691	179610011	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_179560199_179562546_179562665_179567460_179567563_179569301_179569426_179577074_179577137_179580946_179581013_179585795_179585866_179589545_179589648_179591624_179591742_179593477_179593646_179594865_179594964_179596561_179596682_179598691_179598822_179601891_179601987_179605875_179605925_179607581_179607660_179609375
transcript_165914.known	chr5	-	2279	14	FSM	ENSG00000169045.17	ENST00000393432.8	2279	14	0	0	0	0	multi-exon	TRUE	canonical	3	122	junction_13	77.8238034196365	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTCTTGTCTGTGCTTC	-179605489	True	NA	-1	True	AATAAA	-21	NA	179623710	179614177	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_179614960_179615545_179615596_179616125_179616219_179616868_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036_179623165_179623594
transcript_165915.known	chr5	-	2248	14	FSM	ENSG00000169045.17	ENST00000442819.6	2248	14	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_13	79.9897922481696	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGTCTTGTCTGTGCTT	-179623710	False	NA	-2	True	AATAAA	-20	NA	179623721	179614178	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_179614960_179615545_179615596_179616125_179616219_179616868_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036_179623165_179623635
transcript_16593.known	chr1	+	740	5	FSM	ENSG00000081721.12	ENST00000464004.2	740	5	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_1	80.7260026261675	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCACCGTGAAGGAAGTGG	161745354	True	NA	NA	False	NA	NA	NA	161749779	161753105	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161750146_161751654_161751782_161751865_161751985_161752367_161752465_161753074
transcript_165931.nic	chr5	-	2197	13	NIC	ENSG00000169045.17	novel	2279	14	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_1	100.543902793202	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTCTGTCTTGTCTGTGC	-179605460	True	NA	-4	True	AATAAA	-18	NA	179623681	179614180	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_179614960_179616125_179616219_179616868_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036_179623165_179623594
transcript_165932.nic	chr5	-	2156	13	NIC	ENSG00000169045.17	novel	2248	14	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_1	102.138352520273	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTCTGTCTTGTCTGTGC	-179605460	True	NA	-4	True	AATAAA	-18	NA	179623681	179614180	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_179614960_179616125_179616219_179616868_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036_179623165_179623635
transcript_165948.known	chr5	-	594	5	FSM	ENSG00000169045.17	ENST00000504348.5	594	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	104.92229267415	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTAAAGAAACACAAGGAAAG	-179605450	True	NA	NA	False	NA	NA	NA	179623671	179619300	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_179619408_179620891_179621036_179621241_179621398_179623036_179623188_179623635
transcript_165949.known	chr5	-	2114	12	FSM	ENSG00000169045.17	ENST00000329433.10	2114	12	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	92.8009511208028	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTCTGTCTTGTCTGTGC	-179623157	False	NA	-4	True	AATAAA	-18	NA	179623168	179614180	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_179614960_179616125_179616219_179616868_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036
transcript_165950.known	chr5	+	666	4	FSM	ENSG00000250999.2	ENST00000508188.2	666	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1.24721912892465	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTATTGTTAGGTTTTTAT	NA	False	NA	NA	False	AATAGA	-18	NA	179657761	179664430	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_179658098_179658388_179658482_179662974_179663104_179664322
transcript_165952.known	chr5	+	5030	16	FSM	ENSG00000127022.16	ENST00000680984.1	5030	16	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	1142.06741579568	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGAGCCCTAGTAAAAAG	179614265	True	NA	-8	True	AATAAA	-4	NA	179698934	179731622	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_179699103_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179715898_179716001_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
transcript_165954.known	chr5	+	5103	16	FSM	ENSG00000127022.16	ENST00000681072.1	5103	16	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	1115.65559002568	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGAGCCCTAGTAAAAAG	179614286	True	NA	-8	True	AATAAA	-4	NA	179698955	179731622	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_179699103_179699574_179699771_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
transcript_165956.known	chr5	+	5162	16	FSM	ENSG00000127022.16	ENST00000513246.6	5162	16	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_2	1105.69273610107	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGAGCCCTAGTAAAAAG	179614307	True	NA	-8	True	AATAAA	-4	NA	179698976	179731622	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_179699103_179704154_179704431_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
transcript_165957.known	chr5	+	4207	15	FSM	ENSG00000127022.16	ENST00000452673.6	4207	15	0	0	0	0	multi-exon	FALSE	canonical	3	385	junction_1	787.52160968083	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTTGACTGAATTTCTT	179614236	True	NA	33	True	ATTAAA	-18	NA	179698905	179730925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_179699050_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
transcript_165962.known	chr5	+	4853	15	FSM	ENSG00000127022.16	ENST00000679471.1	4853	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	867.429844837198	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGAGCCCTAGTAAAAAG	179614350	True	NA	-8	True	AATAAA	-4	NA	179699019	179731622	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_179699103_179705678_179705863_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
transcript_165967.known	chr5	+	4822	15	FSM	ENSG00000127022.16	ENST00000681476.1	4822	15	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	858.244672787048	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGAGCCCTAGTAAAAAG	179614274	True	NA	-8	True	AATAAA	-4	NA	179698943	179731622	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_179699006_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
transcript_165969.known	chr5	+	5260	15	FSM	ENSG00000127022.16	ENST00000681076.1	5260	15	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_13	1161.08369506198	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTAAAATTTGTTTGAAT	179614429	True	NA	NA	False	AAGAAA	-13	NA	179699098	179731453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_179699771_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726682_179726760_179728590
transcript_165978.known	chr5	+	507	3	FSM	ENSG00000213316.10	ENST00000509898.1	507	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	2.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCCGTGGGCCTGAG	179795371	True	NA	NA	False	NA	NA	NA	179795554	179796375	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_179795857_179795940_179796023_179796252
transcript_165983.known	chr5	-	5173	22	FSM	ENSG00000197226.13	ENST00000356834.7	5173	22	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	74.0984819953392	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTAAATGTGGTCTGTCT	-179901228	True	NA	-26	True	AATAAA	-26	NA	179907859	179862065	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_179864129_179865253_179865361_179865837_179865889_179867444_179867496_179867777_179867850_179869768_179869835_179870254_179870496_179871461_179871531_179872891_179872991_179873118_179873249_179874901_179875188_179875919_179876038_179878308_179878524_179879046_179879198_179879627_179879790_179888102_179888313_179891378_179891587_179893208_179893468_179894385_179894615_179899188_179899308_179904701_179904813_179907703
transcript_165986.known	chr5	-	5155	21	FSM	ENSG00000197226.13	ENST00000355235.8	5155	21	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_13	26.6448400257911	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGTTGTAAATGTGGTC	-179901266	True	NA	-31	True	AATAAA	-21	NA	179907897	179862070	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_179864129_179865253_179865361_179865837_179865889_179867777_179867850_179869768_179869835_179870254_179870496_179871461_179871531_179872891_179872991_179873118_179873249_179874901_179875188_179875919_179876038_179878308_179878524_179879046_179879198_179879627_179879790_179888102_179888313_179891378_179891587_179893208_179893468_179894385_179894615_179899188_179899308_179904701_179904813_179907703
transcript_16599.known	chr1	+	7470	16	FSM	ENSG00000118217.7	ENST00000367942.4	7470	16	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_2	10.5126378971006	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTTTATTCTGTATGTA	161764384	True	NA	26	True	AATAAA	-16	NA	161766319	161964070	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161766443_161778243_161778321_161781911_161782000_161783989_161784097_161791407_161791538_161792123_161792328_161802051_161802273_161819632_161819819_161821069_161821162_161846448_161846581_161851721_161851836_161853223_161853324_161860206_161860278_161863197_161863313_161912295_161912381_161958445
transcript_166.known	SIRV5	+	2029	16	FSM	SIRV5A	SIRV505	2029	16	0	0	0	0	multi-exon	FALSE	canonical	3	6503	junction_10	2237.21177063475	1383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1000	10991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
transcript_1660.known	chr1	-	940	9	FSM	ENSG00000116213.16	ENST00000424367.5	940	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	90.4861004519479	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTTGTGCTGACGCAGG	-3646646	True	NA	NA	False	NA	NA	NA	3650026	3632212	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3632339_3633397_3633504_3634996_3635075_3635943_3636031_3636994_3637099_3638749_3638823_3646665_3646783_3647407_3647561_3649930
transcript_166008.known	chr5	-	2365	15	FSM	ENSG00000161013.17	ENST00000292591.12	2365	15	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_14	42.3853194646737	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGCCTCAAATGTGAGC	-179803573	True	NA	-35	True	AATAAA	-13	NA	179806866	179797609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_179798069_179798164_179798278_179798346_179798435_179798512_179798592_179798927_179799122_179799202_179799311_179799505_179799637_179799953_179800069_179800183_179800260_179800483_179800598_179800906_179800954_179801333_179801468_179801553_179801695_179801783_179801970_179806486
transcript_166020.nnic	chr5	+	2063	9	NNC	ENSG00000161011.20	novel	2253	7	NA	NA	-374	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	131.646069063987	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACGTTTGCATAGAGAGAAA	179806468	False	NA	33	True	ATTAAA	-23	NA	179806949	179837255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_179807124_179811573_179811683_179822957_179823054_179823857_179824088_179824181_179824324_179825145_179825227_179833031_179833247_179833586_179833783_179836435
transcript_166025.nnic	chr5	+	1692	9	NNC	ENSG00000161011.20	novel	2840	8	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	145.777173710427	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCTGCTAAATTGCATGA	179818820	True	NA	12	True	AATAAA	-22	NA	179820901	179838078	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_+_179821142_179822957_179823054_179823857_179824088_179824181_179824324_179825145_179825227_179833031_179833247_179833586_179833783_179836435_179836566_179837716
transcript_16603.known	chr1	+	2974	15	FSM	ENSG00000118217.7	ENST00000680462.1	2974	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	30.886890422961	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCATGCTTGGTCTTCTT	161764385	True	NA	NA	False	AATAAA	-3	NA	161766320	161865955	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161766443_161778243_161778321_161781911_161782000_161783989_161784097_161791407_161791538_161792123_161792328_161802051_161802273_161819632_161819819_161821069_161821162_161846448_161846581_161851721_161851836_161853223_161853324_161860206_161860278_161863197_161863313_161864740
transcript_166031.known	chr5	+	2840	8	FSM	ENSG00000161011.20	ENST00000389805.9	2840	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	125.287587540972	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCTGCTAAATTGCATGA	179818823	True	NA	12	True	AATAAA	-22	NA	179820904	179838078	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_179821142_179822957_179823054_179823857_179824088_179824181_179824324_179825145_179825227_179833031_179833247_179833586_179833783_179836435
transcript_166036.known	chr5	-	1244	8	FSM	ENSG00000161010.16	ENST00000518235.5	1244	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	45.164551749064	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAGAAGAGGGGCACGCA	-179856622	True	NA	NA	False	NA	NA	NA	179858806	179836633	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_179837205_179837759_179837886_179840871_179840960_179841906_179842065_179844151_179844228_179847977_179848067_179853377_179853438_179858730
transcript_166056.known	chr5	-	1168	7	FSM	ENSG00000161010.16	ENST00000292586.11	1168	7	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_5	20.9980157792746	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTCTATGCAAACGTC	-179856633	True	NA	-16	True	AATAAA	-15	NA	179858817	179837275	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_179837886_179840871_179840960_179841906_179842065_179844151_179844228_179847977_179848067_179853377_179853438_179858730
transcript_16606.known	chr1	+	2811	15	FSM	ENSG00000118217.7	ENST00000681169.1	2811	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	30.1036474839302	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTCCAGCCTGGGCGACA	161764384	True	NA	NA	False	NA	NA	NA	161766319	161959632	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161766443_161778243_161778321_161781911_161782000_161783989_161784097_161791407_161791538_161792123_161792328_161819632_161819819_161821069_161821162_161846448_161846581_161851721_161851836_161853223_161853324_161860206_161860278_161863197_161863313_161912295_161912381_161958445
transcript_16607.nic	chr1	+	2409	15	NIC	ENSG00000118217.7	novel	7470	16	NA	NA	-6	61	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	28.7172173343549	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGCCACACATGCATGT	161764356	True	NA	5	True	CATAAA	-17	NA	161766291	161959058	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_161766443_161781911_161782000_161783989_161784097_161791407_161791538_161792123_161792328_161802051_161802273_161819632_161819819_161821069_161821162_161846448_161846581_161851721_161851836_161853223_161853324_161860206_161860278_161863197_161863313_161912295_161912381_161958445
transcript_166075.known	chr5	-	1096	6	FSM	ENSG00000161010.16	ENST00000523084.5	1096	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	57.6298533747918	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTCTATGCAAACGTC	-179856650	True	NA	-16	True	AATAAA	-15	NA	179858834	179837275	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_179837886_179840871_179840960_179841906_179842065_179844151_179844228_179853377_179853438_179858730
transcript_166078.known	chr5	-	4145	6	FSM	ENSG00000161010.16	ENST00000518219.5	4145	6	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_4	19.3142434488126	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTCTATGCAAACGTC	-179856624	True	NA	-16	True	AATAAA	-15	NA	179858808	179837275	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_179840960_179841906_179842065_179844151_179844228_179847977_179848067_179853377_179853438_179858730
transcript_166079.known	chr5	-	1004	5	FSM	ENSG00000161010.16	ENST00000376931.6	1004	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	65.3466716826496	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAACGTCATTGGTTAAA	-179856624	True	NA	-6	True	AATAAA	-25	NA	179858808	179837265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_179837886_179840871_179840960_179841906_179842065_179853377_179853438_179858730
transcript_166082.known	chr5	-	662	5	FSM	ENSG00000161010.16	ENST00000519208.5	662	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	62.8450475375745	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGGGTCTGTACCCCCTT	-179856654	True	NA	NA	False	NA	NA	NA	179858838	179840712	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_179840960_179841906_179842065_179847977_179848067_179853377_179853438_179858730
transcript_166085.known	chr5	-	848	3	FSM	ENSG00000161010.16	ENST00000519318.5	848	3	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	28.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTATATTAAAAATACAAAAA	-179856624	True	NA	NA	False	NA	NA	NA	179858808	179847356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_179848067_179853377_179853438_179858730
transcript_166089.known	chr5	+	1454	2	FSM	ENSG00000245317.2	ENST00000499601.2	1454	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCAAGTTATTCAAATCTA	179858943	True	NA	NA	False	AATAAA	-17	NA	179859012	179861283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_179859213_179860029
transcript_166092.known	chr5	-	1904	9	FSM	ENSG00000113269.14	ENST00000521389.6	1904	9	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_1	42.731538411342	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATGAGTGTCAAAATGAT	-180067272	True	NA	NA	False	AATAAA	-16	NA	180071759	179955066	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_179955670_179963470_179963565_179966805_179967011_179970409_179970507_179978202_179978286_179980128_179980201_180013060_180013312_180040452_180040648_180071455
transcript_166094.known	chr5	-	1766	8	FSM	ENSG00000113269.14	ENST00000261947.4	1766	8	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	217.875736911419	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTGTTTTGAGGGCTG	-180071192	True	NA	1	True	AATAAA	-42	NA	180072101	179955452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_179955670_179966805_179967011_179970409_179970507_179978202_179978286_179980128_179980201_180013060_180013312_180040452_180040648_180071455
transcript_166097.nic	chr5	-	1559	6	NIC	ENSG00000113269.14	novel	697	2	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	271.885564162572	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGGCTACTGGTCTTAT	-180070892	False	NA	-4	True	AATAAA	-22	NA	180071801	179976773	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_179977386_179978202_179978286_179980128_179980201_180013060_180013312_180040452_180040648_180071455
transcript_166103.known	chr5	-	2297	14	FSM	ENSG00000146090.16	ENST00000361132.9	2297	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	3.44526087331672	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTCCACCCCACGTCC	-180209149	True	NA	NA	False	TATAAA	-17	NA	180209211	180100794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_180101526_180102070_180102144_180111456_180111581_180114445_180114542_180118608_180118705_180118786_180118867_180119345_180119449_180121059_180121150_180127608_180127684_180128409_180128611_180136377_180136516_180137589_180137713_180137875_180138059_180209027
transcript_166110.known	chr5	-	4326	12	FSM	ENSG00000050748.18	ENST00000393360.7	4326	12	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	83.740745140548	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATAGCATGTCCAATTTT	-180289507	True	NA	-14	True	GATAAA	-1	NA	180292056	180233593	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_180236532_180238331_180238404_180239923_180239988_180241030_180241156_180242572_180242756_180247438_180247511_180248972_180249139_180261683_180261823_180264780_180264840_180269279_180269410_180280439_180280609_180291847
transcript_166113.known	chr5	-	4336	12	FSM	ENSG00000050748.18	ENST00000455781.5	4336	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	123.638970560751	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATAGCATGTCCAATTTT	-180289522	True	NA	-14	True	GATAAA	-1	NA	180292071	180233593	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_180236527_180238331_180238404_180239923_180239988_180241030_180241156_180242572_180242756_180247854_180247927_180248972_180249139_180261683_180261823_180264780_180264840_180269279_180269410_180280439_180280609_180291847
transcript_166115.known	chr5	-	2266	7	FSM	ENSG00000050748.18	ENST00000425491.6	2266	7	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_4	6.91415617089718	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATATGAACATTAATGTCAG	-180289418	True	NA	NA	False	ATTAAA	-13	NA	180291967	180246027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_180247511_180248972_180249139_180261683_180261823_180264780_180264840_180269279_180269410_180280439_180280609_180291847
transcript_166118.known	chr5	-	3034	19	FSM	ENSG00000131459.13	ENST00000253778.13	3034	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	182.90738397099	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTGTTTGCATTTT	-180337947	True	NA	-29	True	AATAAA	-15	NA	180353336	180300697	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_180301609_180302422_180302585_180304771_180304940_180307175_180307304_180312429_180312545_180313806_180313965_180316340_180316462_180316763_180316862_180316962_180317059_180318792_180318957_180324187_180324306_180324815_180324896_180328276_180328339_180330699_180330835_180331494_180331554_180335827_180335954_180336478_180336578_180338492_180338601_180353210
transcript_166124.nnic	chr5	-	2879	18	NIC	ENSG00000131459.13	novel	3034	19	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	217.61899660108	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTGTTTGCATTTT	-180337950	True	NA	-29	True	AATAAA	-15	NA	180353339	180300697	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_180301609_180302422_180302585_180304771_180304940_180307175_180307304_180312429_180312545_180316340_180316462_180316763_180316862_180316962_180317059_180318792_180318957_180324187_180324306_180324815_180324896_180328276_180328339_180330699_180330835_180331494_180331554_180335827_180335954_180336478_180336578_180338492_180338601_180353210
transcript_166127.nnic	chr5	-	2925	18	NIC	ENSG00000131459.13	novel	3034	19	NA	NA	-54	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	238.430522766804	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTGTTTGCATTT	-180338001	True	NA	-30	True	AATAAA	-14	NA	180353390	180300698	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_180301609_180304771_180304940_180307175_180307304_180312429_180312545_180313806_180313965_180316340_180316462_180316763_180316862_180316962_180317059_180318792_180318957_180324187_180324306_180324815_180324896_180328276_180328339_180330699_180330835_180331494_180331554_180335827_180335954_180336478_180336578_180338492_180338601_180353210
transcript_166129.nic	chr5	-	2239	18	ISM	ENSG00000131459.13	ENST00000253778.13	3034	19	-3	1612	-3	-1612	5prime_fragment	FALSE	canonical	0	0	junction_8	185.944367912764	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGCTTTCTTTTTTTTTTT	-180337950	True	NA	-3	True	AGTAAA	-30	NA	180353339	180302309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_180302585_180304771_180304940_180307175_180307304_180312429_180312545_180313806_180313965_180316340_180316462_180316763_180316862_180316962_180317059_180318792_180318957_180324187_180324306_180324815_180324896_180328276_180328339_180330699_180330835_180331494_180331554_180335827_180335954_180336478_180336578_180338492_180338601_180353210
transcript_16613.known	chr1	+	3032	16	FSM	ENSG00000118217.7	ENST00000681557.1	3032	16	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	28.9344085821708	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTCCGTCTCAAAAAAAAA	161764406	True	NA	NA	False	NA	NA	NA	161766341	161959658	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_161766443_161778243_161778317_161781911_161782000_161783989_161784097_161791407_161791538_161792123_161792328_161802051_161802273_161819632_161819819_161821069_161821162_161846448_161846581_161851721_161851836_161853223_161853324_161860206_161860278_161863197_161863313_161912295_161912381_161958445
transcript_16614.known	chr1	-	2685	8	FSM	ENSG00000162745.11	ENST00000367940.2	2685	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	8.15913160645351	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTGCAAATGAACTTCT	-162023319	False	NA	NA	False	NA	NA	NA	162023640	161983455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_161984277_161984803_161984981_161997824_161998350_162000112_162000342_162006296_162006474_162017399_162017508_162019918_162020183_162023256
transcript_166147.nic	chr5	-	2617	13	ISM	ENSG00000131459.13	ENST00000253778.13	3034	19	-54	14472	-54	1594	5prime_fragment	FALSE	canonical	0	0	junction_3	212.51802211159	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTATGACCACGGTGTTACT	-180338001	True	NA	NA	False	AAAAAG	-12	NA	180353390	180315169	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_180316462_180316763_180316862_180316962_180317059_180318792_180318957_180324187_180324306_180324815_180324896_180328276_180328339_180330699_180330835_180331494_180331554_180335827_180335954_180336478_180336578_180338492_180338601_180353210
transcript_166166.known	chr5	-	601	5	FSM	ENSG00000131459.13	ENST00000518158.5	601	5	0	0	0	0	multi-exon	FALSE	canonical	3	699	junction_4	51.9951920854227	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAGTGTGGGAACTGAG	-180337947	True	NA	93	True	NA	NA	NA	180353336	180331411	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_180331554_180335827_180335954_180336478_180336578_180338492_180338601_180353210
transcript_16617.nnic	chr1	+	5705	12	Fusion	ENSG00000198929.13_ENSG00000239887.6	novel	5016	10	NA	NA	-2	-1	multi-exon	FALSE	canonical	3	26	junction_3	14.4605476388873	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGCTGGCTTTGTCTGTT	162068714	True	NA	12	True	AATAAA	-14	NA	162069688	162386811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr1_+_162070283_162154404_162154477_162287343_162287437_162300632_162300707_162333016_162333126_162343834_162343977_162355186_162355354_162356959_162357137_162365403_162365570_162367051_162367205_162381890_162382219_162383181
transcript_166175.known	chr5	-	943	3	FSM	ENSG00000131459.13	ENST00000503546.1	943	3	0	0	0	0	multi-exon	FALSE	canonical	3	699	junction_2	69	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCAACAGCCACCCTC	-180337947	True	NA	NA	False	NA	NA	NA	180353336	180335868	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_180336578_180338492_180338601_180353210
transcript_166181.known	chr5	+	6219	12	FSM	ENSG00000113300.13	ENST00000261951.9	6219	12	0	0	0	0	multi-exon	TRUE	canonical	3	173	junction_5	23.583857765587	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGTTGGGGTTATAAT	180485837	True	NA	-27	True	AATAAA	-23	NA	180494378	180578358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_180494764_180529274_180529389_180549930_180550118_180553385_180553472_180564488_180564594_180564674_180564744_180565819_180565978_180567087_180567243_180567848_180568004_180569109_180569341_180571229_180571433_180573987
transcript_16619.nnic	chr1	+	5688	12	Fusion	ENSG00000198929.13_ENSG00000239887.6	novel	1732	11	NA	NA	0	-1	multi-exon	FALSE	canonical	3	34	junction_3	12.6876005064618	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGCTGGCTTTGTCTGTT	162068716	True	NA	12	True	AATAAA	-14	NA	162069690	162386811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr1_+_162070283_162154404_162154477_162287343_162287437_162300647_162300707_162333016_162333126_162343834_162343977_162355186_162355354_162356959_162357137_162365403_162365570_162367051_162367205_162381890_162382219_162383181
transcript_166192.known	chr5	-	5833	30	FSM	ENSG00000037280.16	ENST00000261937.11	5833	30	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_21	16.3312179626226	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGAGTGTTGCTTTTATTG	-180649131	True	NA	-12	True	AATAAA	-31	NA	180649600	180601505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_180603391_180608967_180609054_180609904_180610026_180611330_180611480_180612505_180612612_180613010_180613111_180614067_180614180_180616366_180616490_180616899_180616995_180618769_180618921_180619020_180619110_180619252_180619367_180619664_180619770_180620172_180620309_180620608_180620716_180620875_180621008_180621105_180621253_180621541_180621905_180622730_180622840_180623934_180624062_180625868_180626032_180626110_180626266_180628881_180629000_180629258_180629428_180629695_180629836_180629942_180630106_180630224_180630338_180630554_180630800_180631681_180631779_180649487
transcript_166194.known	chr5	-	4292	30	FSM	ENSG00000037280.16	ENST00000393347.7	4292	30	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_21	16.4234251657078	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGGTGCCTTCCCAGACA	-180649155	True	NA	NA	False	NA	NA	NA	180649624	180607964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_180608285_180608967_180609054_180609904_180610026_180611330_180611480_180612505_180612612_180613010_180613111_180614067_180614180_180616366_180616490_180616899_180616995_180618769_180618921_180619020_180619110_180619252_180619367_180619664_180619770_180620172_180620309_180620608_180620716_180620875_180621008_180621105_180621253_180621541_180621905_180622730_180622840_180623934_180624062_180625868_180626032_180626110_180626266_180628881_180629000_180629258_180629428_180629695_180629836_180629942_180630106_180630224_180630338_180630554_180630800_180631681_180631779_180649487
transcript_166196.nic	chr5	-	3276	11	ISM	ENSG00000037280.16	ENST00000261937.11	5833	30	30232	0	1	0	intron_retention	FALSE	canonical	3	27	junction_10	14.6727638841494	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGAGTGTTGCTTTTATTG	-180619311	False	NA	-12	True	AATAAA	-31	NA	180619368	180601505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr5_-_180603391_180608967_180609054_180609904_180610026_180611330_180611480_180612505_180612612_180613010_180613111_180614067_180614180_180616366_180616490_180616899_180616995_180618769_180618921_180619020
transcript_166202.nnic	chr5	-	2925	4	NNC	ENSG00000131446.17	novel	3077	3	NA	NA	-47	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	68.655338871464	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATTTATGTGTGTGT	-180809989	False	NA	-7	True	AATAAA	-15	NA	180810184	180790547	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_180793098_180808647_180808811_180809009_180809077_180810039
transcript_166204.known	chr5	-	878	3	FSM	ENSG00000131446.17	ENST00000504671.1	878	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	16.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGCTTCCCCGCGGCCGTGG	-180799446	True	NA	NA	False	NA	NA	NA	180802794	180792372	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_180793098_180795837_180795876_180802679
transcript_16621.known	chr1	+	5016	10	FSM	ENSG00000198929.13	ENST00000361897.10	5016	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	15.3992143458404	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTTTTCCATTGTCTTT	162068716	True	NA	NA	False	AATAAA	-16	NA	162069690	162370475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_162070283_162154404_162154477_162287343_162287437_162300632_162300707_162333016_162333126_162343834_162343977_162355186_162355354_162356959_162357137_162365403_162365570_162367051
transcript_166210.known	chr5	-	3175	3	FSM	ENSG00000131446.17	ENST00000446023.6	3175	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	55	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATTTATGTGTGTGT	-180808605	True	NA	-7	True	AATAAA	-15	NA	180809829	180790547	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_180793098_180808647_180809077_180809633
transcript_166212.known	chr5	-	1104	3	FSM	ENSG00000131446.17	ENST00000506889.1	1104	3	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	10.5	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGGCAGCGCGGTCACGC	-180809145	True	NA	NA	False	NA	NA	NA	180810127	180792510	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_180793098_180808647_180809077_180810039
transcript_166214.known	chr5	-	8445	2	FSM	ENSG00000131446.17	ENST00000307826.5	8445	2	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_1	0	865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTGCCCAGATTAACTAT	-180799458	True	NA	NA	False	AATAAA	-26	NA	180802806	180784779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_180793098_180802679
transcript_166215.known	chr5	-	1919	2	FSM	ENSG00000131446.17	ENST00000427865.2	1919	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAGGATTATTCTCCCGT	-180803709	False	NA	NA	False	NA	NA	NA	180803904	180791481	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_180793098_180803601
transcript_166216.known	chr5	-	534	2	FSM	ENSG00000131446.17	ENST00000505682.1	534	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCCAATAACGTCTTTT	-180802572	False	NA	NA	False	NA	NA	NA	180802767	180795429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_180795876_180802679
transcript_166218.known	chr5	+	984	1	FSM	ENSG00000280161.1	ENST00000624602.1	984	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTGGGATATATTATTG	180810356	False	NA	4	True	AATACA	-16	NA	180810400	180811384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_180810400_180811400
transcript_166219.known	chr5	+	1708	2	FSM	ENSG00000245060.8	ENST00000653411.1	1708	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGTGTCAACTGAGCCGA	NA	False	NA	28	True	AATAAA	-38	NA	180830936	180835726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_180831230_180834311
transcript_16622.known	chr1	+	2894	10	FSM	ENSG00000198929.13	ENST00000530878.5	2894	10	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	13.4329611197399	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAGAGAAAGAAAAAA	162068799	True	NA	NA	False	NA	NA	NA	162069773	162368451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_162070283_162154404_162154477_162287343_162287437_162300647_162300707_162333016_162333126_162343834_162343977_162355186_162355354_162356959_162357137_162365403_162365570_162367051
transcript_166220.known	chr5	+	1817	2	FSM	ENSG00000245060.8	ENST00000659553.1	1817	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGCCGATCATTTATGTG	180831255	False	NA	39	True	AATAAA	-33	NA	180831415	180835737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_180831807_180834311
transcript_166221.known	chr5	-	1652	1	FSM	ENSG00000278970.3	ENST00000623091.1	1652	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTTATTTTCTTTGGTA	-180831157	True	NA	0	True	AGTAAA	-21	NA	180831605	180829953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_180830000_180831600
transcript_166222.known	chr5	+	1231	3	FSM	ENSG00000245060.8	ENST00000508309.2	1231	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGTGTCAACTGAGCCGA	180830834	True	NA	28	True	AATAAA	-38	NA	180830994	180835726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_180831230_180834311_180835003_180835421
transcript_166226.known	chr5	-	725	4	FSM	ENSG00000196670.14	ENST00000506377.5	725	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	19.3275853524323	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCTGTGAGTTTAGATGG	-180858640	True	NA	-36	True	AATAAA	-20	NA	180861285	180847610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_180848083_180851380_180851494_180851987_180852061_180861218
transcript_166228.nnic	chr5	-	968	4	NNC	ENSG00000196670.14	novel	725	4	NA	NA	-189	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	33.0689515339624	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCTGTGAGTTTAGATGG	-180861463	False	NA	-36	True	AATAAA	-20	NA	180861474	180847610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr5_-_180848083_180851380_180851494_180860527_180860655_180861218
transcript_166232.nic	chr5	-	1512	3	NIC	ENSG00000196670.14	novel	725	4	NA	NA	-169	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	25.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCTGTGAGTTTAGATGG	-180861388	True	NA	-36	True	AATAAA	-20	NA	180861454	180847610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_-_180848083_180851380_180851494_180860527
transcript_166236.known	chr5	-	749	2	FSM	ENSG00000196670.14	ENST00000504225.1	749	2	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCCGTACAAGTGTGAG	-180860686	False	NA	NA	False	NA	NA	NA	180860697	180850914	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_180851494_180860527
transcript_166237.known	chr5	-	3941	2	FSM	ENSG00000196670.14	ENST00000502412.2	3941	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCTGTGAGTTTAGATGG	-180858631	True	NA	-36	True	AATAAA	-20	NA	180861276	180847610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_180851494_180861218
transcript_166238.known	chr5	-	4010	3	FSM	ENSG00000196670.14	ENST00000512132.5	4010	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACGGGCTGTGAGTTTAG	-180858631	True	NA	-40	True	AATAAA	-16	NA	180861276	180847614	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_180851494_180851987_180852061_180861218
transcript_16624.nic	chr1	+	761	3	ISM	ENSG00000198929.13	ENST00000430120.3	1732	11	-404	80057	-5	-79786	5prime_fragment	FALSE	canonical	3	54	junction_2	3	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAGTGGCTCTGAACCAG	162068711	True	NA	26	True	AAGAAA	-3	NA	162069685	162287435	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_162070283_162154404_162154477_162287343
transcript_166242.known	chr5	+	339	1	FSM	ENSG00000231228.4	ENST00000511402.1	339	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAGAGCTGAACTGCAT	NA	False	NA	NA	False	NA	NA	NA	180982272	180982611	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_180982300_180982600
transcript_166244.known	chr5	+	289	2	FSM	ENSG00000250222.3	ENST00000514487.1	289	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAGCAGCGTTTGTACTT	181191734	True	NA	28	True	AATAAA	-25	NA	181191923	181194429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_181192017_181194233
transcript_166246.known	chr5	+	2696	8	FSM	ENSG00000146063.20	ENST00000351937.9	2696	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	6.80036013452109	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGGTCTGTTCCTTCAG	181220856	True	NA	9	True	AATAAA	-19	NA	181223289	181235808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_181224813_181230743_181230840_181232658_181232890_181233412_181233436_181233635_181233764_181234173_181234350_181234931_181234996_181235353
transcript_166249.nic	chr5	+	3332	7	NIC	ENSG00000146063.20	novel	2696	8	NA	NA	-46	0	intron_retention	FALSE	canonical	3	13	junction_6	6.05530070819498	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGAGGTCTGTTCCTTCA	NA	False	NA	8	True	AATAAA	-18	NA	181223234	181235807	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr5_+_181224813_181230743_181230840_181232658_181232890_181233412_181233436_181233635_181233764_181234173_181234996_181235353
transcript_16625.nnic	chr1	+	5654	12	Fusion	ENSG00000198929.13_ENSG00000239887.6	novel	1732	11	NA	NA	35	0	multi-exon	FALSE	canonical	3	34	junction_3	12.6876005064618	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGGCTTTGTCTGTTT	162068751	True	NA	13	True	AATAAA	-15	NA	162069725	162386812	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr1_+_162070283_162154404_162154477_162287343_162287437_162300647_162300707_162333016_162333126_162343834_162343977_162355186_162355354_162356959_162357137_162365403_162365570_162367051_162367205_162381890_162382219_162383181
transcript_166254.known	chr5	+	3645	6	FSM	ENSG00000146063.20	ENST00000315073.10	3645	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	5.67802782663136	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGGTCTGTTCCTTCAG	181220847	True	NA	9	True	AATAAA	-19	NA	181223280	181235808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_181224813_181230743_181230840_181232658_181232890_181233412_181233436_181233635_181233764_181234173
transcript_16626.known	chr1	+	8524	8	FSM	ENSG00000152332.16	ENST00000489294.2	8524	8	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	7.97700777617927	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTCTATACTTAGTATA	162494597	True	NA	35	True	AATAAA	-36	NA	162497817	162529631	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_162498269_162499954_162500248_162500912_162501105_162503753_162503849_162512499_162512577_162512724_162512824_162518101_162518191_162522403
transcript_166263.known	chr5	+	3834	5	FSM	ENSG00000146063.20	ENST00000508930.1	3834	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	4.81534007106456	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGAGGTCTGTTCCTTC	181220856	True	NA	7	True	AATAAA	-17	NA	181223289	181235806	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_181224813_181230743_181230840_181232658_181232890_181233412_181233764_181234173
transcript_166280.known	chr5	-	1098	8	FSM	ENSG00000204628.12	ENST00000504325.5	1098	8	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	3733.40043064097	7627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTTTTTTTTTCTTATA	-181103462	True	NA	-5	True	AATAAA	-24	NA	181243889	181236925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181241491_181241640_181242169_181242346_181243691
transcript_166293.known	chr5	-	1651	7	FSM	ENSG00000204628.12	ENST00000513060.5	1651	7	0	0	0	0	multi-exon	FALSE	canonical	3	8776	junction_1	823.336234812701	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTACAAATAAAAAAAAAAC	-181103520	True	NA	-1	True	NA	NA	NA	181243947	181236960	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181241491_181242346_181243691
transcript_166324.known	chr5	+	1046	3	FSM	ENSG00000233937.8	ENST00000506340.3	1061	3	14	1	0	-1	multi-exon	FALSE	canonical	3	29	junction_1	12	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCCTTGTACTGTTAACT	181245404	True	NA	7	True	AATAAA	-16	NA	181246506	181257585	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_181246883_181247115_181247387_181257186
transcript_166328.known	chr5	+	529	3	FSM	ENSG00000248275.3	ENST00000509252.2	864	3	11	324	2	-4	multi-exon	FALSE	canonical	2	13	junction_2	59	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAATTGGCTGGGTGCGG	181260403	True	NA	NA	False	NA	NA	NA	181261223	181264257	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_181261385_181263627_181263790_181264051
transcript_166332.known	chr5	+	886	2	FSM	ENSG00000233937.8	ENST00000505151.6	1280	2	394	0	378	0	multi-exon	FALSE	canonical	3	53	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCTTGTACTGTTAACTA	181246886	False	NA	8	True	AATAAA	-17	NA	181246900	181257586	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_181247387_181257186
transcript_166334.known	chr5	+	807	2	FSM	ENSG00000248275.3	ENST00000514146.1	807	2	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGCTGGGTGCGGTGGC	181260391	True	NA	NA	False	AAAAAG	-3	NA	181261211	181264261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_181261385_181263627
transcript_166337.known	chr5	-	633	2	FSM	ENSG00000183718.6	ENST00000688015.1	2856	2	886	1337	-63	-97	multi-exon	FALSE	canonical	3	10	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAGGAGAATGACATGAAC	-181260209	False	NA	NA	False	AAAACA	-20	NA	181260257	181256483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_181256860_181260000
transcript_166338.known	chr5	-	370	2	FSM	ENSG00000183718.6	ENST00000510796.2	2801	2	822	1609	-130	-622	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCATTCATCACTCTGC	-181260276	False	NA	NA	False	NA	NA	NA	181260324	181257008	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_181257055_181260000
transcript_166340.known	chr5	-	4753	1	FSM	ENSG00000183718.6	ENST00000612671.1	4753	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATCGGC	-181260694	True	NA	NA	False	AATAGA	-16	NA	181261139	181256386	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_181256400_181261100
transcript_166341.known	chr5	-	1150	8	FSM	ENSG00000204628.12	ENST00000511473.5	1150	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	4542.10382343437	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGCAAAAAAGCTCCATT	-181103489	True	NA	12	True	AATAAA	-41	NA	181243916	181236908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181241491_181241640_181242173_181242346_181243679
transcript_166342.known	chr5	-	888	2	FSM	ENSG00000204628.12	ENST00000509148.1	888	2	0	0	0	0	multi-exon	FALSE	canonical	3	11382	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTAGGTTTTTTTTTCTT	-181238153	False	364	-8	True	AATAAA	-21	NA	181238195	181236928	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_181237720_181238098
transcript_166343.known	chr5	-	965	8	FSM	ENSG00000204628.12	ENST00000376817.8	965	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	4760.04238962432	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGACTTTTAGGTTTT	-181103476	True	NA	-16	True	AATAAA	-13	NA	181243903	181236936	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181241491_181241640_181242173_181242214_181243691
transcript_166344.known	chr5	-	1208	9	FSM	ENSG00000204628.12	ENST00000508682.5	1208	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	5023.37299530903	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGACTTTTAGGTTTT	-181103475	True	NA	-16	True	AATAAA	-13	NA	181243902	181236936	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181240215_181240328_181241491_181241640_181242173_181242346_181243691
transcript_166345.known	chr5	-	825	6	FSM	ENSG00000204628.12	ENST00000511566.5	825	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	5168.4446170971	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACTTTTAGGTTTTTTT	-181103453	True	NA	-13	True	AATAAA	-16	NA	181243880	181236933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_181237043_181239066_181239178_181239486_181239583_181241491_181241640_181242173_181242346_181243691
transcript_166346.known	chr5	+	672	3	FSM	ENSG00000248275.3	ENST00000507434.1	672	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTCTGTCAGTAAATGT	181260401	True	NA	NA	False	AATAAA	-19	NA	181261221	181272307	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_+_181261385_181271572_181271690_181271915
transcript_166347.known	chr5	-	3466	2	FSM	ENSG00000183718.6	ENST00000611618.1	3466	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGCTTTCATTAATTTC	-181260673	True	NA	0	True	AATAAA	-20	NA	181261118	181255146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr5_-_181257495_181260000
transcript_166348.known	chr6	+	1485	8	FSM	ENSG00000112679.15	ENST00000344450.9	1485	8	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_7	49.5745161656796	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCGCGTGCGATGCATTCT	290630	True	NA	16	True	AATAAA	-22	NA	292096	351355	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_292561_304627_304662_311879_311963_335113_335164_345853_345929_348102_348275_348768_348842_350821
transcript_16635.nnic	chr1	+	2509	12	NNC	ENSG00000117143.13	novel	2377	11	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	97.6404265279601	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCATTTGTACTTGAAGA	162561416	True	NA	20	True	AATAAA	-21	NA	162561480	162599837	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_162561778_162562472_162562585_162566011_162566349_162576776_162576982_162579427_162579604_162581286_162581460_162587474_162587669_162588692_162588834_162590322_162590512_162592731_162592783_162597791_162597859_162599270
transcript_166351.known	chr6	+	3075	7	FSM	ENSG00000112679.15	ENST00000419235.7	3075	7	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	40.557572248184	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCGCGTGCGATGCATTCT	292464	False	NA	16	True	AATAAA	-22	NA	292486	351355	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_292561_304627_304662_311879_311963_335113_335164_345853_345929_348102_348275_348768
transcript_166353.known	chr6	+	587	7	FSM	ENSG00000112679.15	ENST00000603726.5	587	7	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_6	50.0288805480283	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCAGTAGTGATTTGTAA	292414	False	NA	NA	False	AAAAAG	-22	NA	292539	350950	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_292561_304627_304662_311879_311963_345853_345929_348102_348275_348768_348842_350821
transcript_166354.known	chr6	+	1166	6	FSM	ENSG00000112679.15	ENST00000603795.5	1166	6	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_3	35.2442903177238	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAAGAGCAGTCTGTGCC	292376	False	NA	NA	False	NA	NA	NA	292461	349471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_292561_304627_304662_311879_311963_345853_345929_348102_348275_348768
transcript_166356.known	chr6	+	804	6	FSM	ENSG00000112679.15	ENST00000603453.5	804	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	69.9296789639421	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCGACCTGCTGCCTTCCT	292263	False	NA	NA	False	NA	NA	NA	292273	348954	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_292561_304627_304662_335113_335164_345853_345929_348102_348275_348768
transcript_166359.known	chr6	+	867	4	FSM	ENSG00000112679.15	ENST00000605315.5	867	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	90.2748888426652	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCTCCAGGCCCCTGCA	292264	False	NA	NA	False	NA	NA	NA	292274	349102	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_292561_345853_345929_348102_348275_348768
transcript_166368.nnic	chr6	-	4536	29	NIC	ENSG00000112685.14	novel	4456	28	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	2	45	junction_27	114.574696025727	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGTTGTAATTTACTTG	-686621	True	NA	-20	True	AATAAA	-15	NA	693145	485153	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_486765_488978_489039_491124_491187_497366_497490_499644_499701_532468_532611_549174_549292_553853_553921_555226_555289_555953_556014_556483_556565_562783_562846_564032_564155_564544_564703_564863_564930_572519_572645_576756_576883_592468_592588_598020_598124_598859_598942_599079_599226_610097_610179_617710_617836_619429_619544_629834_629962_632940_633118_637700_637862_689138_689213_693018
transcript_166371.nnic	chr6	-	3299	29	NNC	ENSG00000112685.14	novel	4456	28	NA	NA	-21	-948	at_least_one_novel_splicesite	FALSE	canonical	2	26	junction_1	97.2586691482553	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTATTTGTGGTCCAGGTG	-686636	True	NA	-5	True	ATTAAA	-22	NA	693160	486101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_486404_486633_486765_488978_489039_491124_491187_497366_497490_499644_499701_532468_532611_549174_549292_553853_553921_555226_555289_555953_556014_556483_556565_562783_562846_564032_564155_564544_564703_564863_564930_572519_572645_576756_576883_592468_592588_598020_598124_598859_598942_599079_599226_610097_610179_617710_617836_619429_619544_629834_629962_632940_633118_637700_637862_693018
transcript_166373.nnic	chr6	-	3588	29	NIC	ENSG00000112685.14	novel	4456	28	NA	NA	-6	-948	combination_of_known_splicesites	FALSE	canonical	2	45	junction_27	114.574696025727	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTATTTGTGGTCCAGGTG	-686621	True	NA	-5	True	ATTAAA	-22	NA	693145	486101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_486765_488978_489039_491124_491187_497366_497490_499644_499701_532468_532611_549174_549292_553853_553921_555226_555289_555953_556014_556483_556565_562783_562846_564032_564155_564544_564703_564863_564930_572519_572645_576756_576883_592468_592588_598020_598124_598859_598942_599079_599226_610097_610179_617710_617836_619429_619544_629834_629962_632940_633118_637700_637862_689138_689213_693018
transcript_166375.known	chr6	-	4456	28	FSM	ENSG00000112685.14	ENST00000230449.9	4456	28	0	0	0	0	multi-exon	TRUE	canonical	2	320	junction_17	61.0457113577315	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGTTGTAATTTACTTG	-686615	True	NA	-20	True	AATAAA	-15	NA	693139	485153	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_486765_488978_489039_491124_491187_497366_497490_499644_499701_532468_532611_549174_549292_553853_553921_555226_555289_555953_556014_556483_556565_562783_562846_564032_564155_564544_564703_564863_564930_572519_572645_576756_576883_592468_592588_598020_598124_598859_598942_599079_599226_610097_610179_617710_617836_619429_619544_629834_629962_632940_633118_637700_637862_693018
transcript_16638.known	chr1	+	2377	11	FSM	ENSG00000117143.13	ENST00000271469.7	2377	11	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_8	46.2156899764571	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTGTACTTGAAGAAATTA	162558201	True	NA	25	True	AATAAA	-26	NA	162561505	162599842	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_162561778_162566011_162566349_162576776_162576982_162579427_162579604_162581286_162581460_162587474_162587669_162588692_162588834_162590322_162590512_162592731_162592783_162597791_162597859_162599270
transcript_166385.nnic	chr6	-	2834	24	NNC	ENSG00000112685.14	novel	720	6	NA	NA	-21	-38927	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	107.322650119783	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCAGAGCTACCCCCTCT	-686636	True	NA	NA	False	AATAAA	-13	NA	693160	524080	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_524350_532468_532611_549174_549292_553853_553921_555226_555289_555953_556014_556483_556565_562783_562846_564032_564155_564544_564703_564863_564930_572519_572645_576756_576883_592468_592588_598020_598124_598859_598942_599079_599226_610097_610179_617710_617836_619429_619544_629834_629962_632940_633118_637700_637862_693018
transcript_166391.known	chr6	-	536	3	FSM	ENSG00000112685.14	ENST00000475028.2	536	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	26.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATATTTCTTTATGGCT	-686584	True	NA	NA	False	NA	NA	NA	693108	679142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_679515_689138_689213_693018
transcript_166393.known	chr6	-	1665	11	FSM	ENSG00000112699.11	ENST00000380815.5	1665	11	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_5	24.0518190580255	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGGGTCAGTGTGGAT	-2240745	True	NA	-17	True	ATTAAA	-24	NA	2245605	1623805	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_1624232_1624471_1624541_1726415_1726513_1742467_1742587_1930102_1930231_1959866_1959972_1960773_1960967_2115770_2115881_2117468_2117557_2124686_2124732_2245320
transcript_166395.nic	chr6	-	1005	2	ISM	ENSG00000112699.11	ENST00000380815.5	1665	11	-29	500235	-29	-164335	5prime_fragment	FALSE	canonical	3	276	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTACAGTGGCCCGTATG	-2240774	True	NA	NA	False	TATAAA	-28	NA	2245634	2124040	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_2124732_2245320
transcript_166402.known	chr6	+	3792	5	FSM	ENSG00000250903.10	ENST00000607519.2	3792	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8.24621125123532	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTCCATCTCAAAAAACAAG	2245407	True	NA	NA	False	NA	NA	NA	2245776	2484007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_2245931_2248836_2248927_2398576_2398779_2398865_2399038_2480833
transcript_166404.known	chr6	+	2078	7	FSM	ENSG00000250903.10	ENST00000524770.6	2078	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	6.82316316348624	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGTGTGTGTTCTGACTG	2245398	True	NA	NA	False	GATAAA	-1	NA	2245767	2399896	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_2245931_2248836_2248927_2263600_2263685_2269697_2269800_2397220_2397627_2398576_2398779_2398865
transcript_166406.known	chr6	+	3239	7	FSM	ENSG00000124535.16	ENST00000380769.8	3239	7	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_2	33.1612223337239	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATGCGATCTCGGCTCA	2766034	False	NA	NA	False	NA	NA	NA	2766051	2786952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_2766445_2768690_2768883_2770119_2770362_2779262_2779493_2783405_2783562_2784323_2784404_2785006
transcript_166407.known	chr6	+	2595	7	FSM	ENSG00000124535.16	ENST00000380771.8	2595	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	106.571832843184	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCGATTCTGTCATGGT	2762919	True	NA	7	True	AATAAA	-15	NA	2765413	2785745	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_2766445_2768690_2768883_2770194_2770362_2779262_2779493_2783405_2783562_2784323_2784404_2785006
transcript_16641.known	chr1	+	2294	10	FSM	ENSG00000117143.13	ENST00000367926.8	2294	10	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_8	57.0550957462809	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCATTTGTACTTGAAGA	162558228	True	NA	20	True	AATAAA	-21	NA	162561532	162599837	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_162561778_162566011_162566349_162576776_162576982_162579427_162579604_162581286_162581460_162587474_162587669_162588692_162588834_162590322_162590512_162597791_162597859_162599270
transcript_166413.known	chr6	-	2476	7	FSM	ENSG00000021355.13	ENST00000380739.6	2476	7	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_6	9.15453742990631	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGTCTCAGGCCTCTTC	-2840417	True	NA	-1	True	AATAAA	-24	NA	2841863	2832331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_2834013_2835855_2836024_2836107_2836251_2837881_2838000_2838548_2838687_2840418_2840595_2841811
transcript_166430.known	chr6	-	4143	7	FSM	ENSG00000170542.6	ENST00000380698.5	4143	7	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_3	36.2950869035099	216	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATCTAGATTTTCCCTT	-2890317	True	NA	-2	True	AATAAA	-24	NA	2903309	2887269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_2890571_2891832_2891989_2893410_2893554_2895390_2895509_2896052_2896191_2900443_2900622_2903200
transcript_166433.known	chr6	-	1495	7	FSM	ENSG00000124570.21	ENST00000380524.5	1495	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	92.3176882052164	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCGTGTGTTTGTGTGTCT	-2962077	False	947	-1	True	AATAAA	-28	NA	2962108	2948158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2961893
transcript_166435.known	chr6	-	1370	7	FSM	ENSG00000124570.21	ENST00000380529.5	1370	7	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_6	75.3539794717056	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCGTGTGTTTGTGTGTCT	-2971175	False	NA	-1	True	AATAAA	-28	NA	2971206	2948158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2971116
transcript_166436.known	chr6	-	1638	7	FSM	ENSG00000124570.21	ENST00000643098.1	1638	7	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_6	73.5151156036786	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCGTGTGTTTGTGTGTCT	-2971574	False	NA	-1	True	AATAAA	-28	NA	2971605	2948158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2971247
transcript_166437.known	chr6	-	1375	7	FSM	ENSG00000124570.21	ENST00000380546.7	1375	7	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_6	79.4035053802203	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCGTGTGTTTGTGTGTCT	-2971098	True	NA	-1	True	AATAAA	-28	NA	2971585	2948158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2971490
transcript_166438.known	chr6	-	1315	7	FSM	ENSG00000124570.21	ENST00000380539.7	1315	7	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_6	79.4035053802203	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCGTGTGTTTGTGTGTCT	-2971080	True	NA	-1	True	AATAAA	-28	NA	2971567	2948158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2971532
transcript_16644.nic	chr1	+	2708	9	ISM	ENSG00000117143.13	ENST00000271469.7	2377	11	25	6065	-2	5672	5prime_fragment	FALSE	canonical	3	141	junction_8	41.9223612765312	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAGGTAATTTGGGAAA	162558226	True	NA	NA	False	AAAAAG	-16	NA	162561530	162593777	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_162561778_162566011_162566349_162576776_162576982_162579427_162579604_162581286_162581460_162587474_162587669_162588692_162588834_162590322_162590512_162592731
transcript_166440.known	chr6	-	1313	7	FSM	ENSG00000124570.21	ENST00000380520.6	1313	7	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_6	94.9047768379794	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAATAAAGGGCCCATTT	-2971630	False	31	-38	True	NA	NA	NA	2971661	2948195	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2971591
transcript_166460.nnic	chr6	+	1233	7	NNC	ENSG00000124588.22	novel	1073	7	NA	NA	-69	-1195	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_6	446.764448252345	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGATAGTGGTGTGTGGG	2987174	True	NA	NA	False	AATAAA	-28	NA	2999824	3018560	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_3000086_3006467_3006560_3010024_3010190_3012543_3012675_3015529_3015644_3016883_3016986_3018192
transcript_166461.known	chr6	+	1073	7	FSM	ENSG00000124588.22	ENST00000380455.11	1073	7	0	0	0	0	multi-exon	FALSE	canonical	3	1034	junction_4	105.311310989002	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGATACTTTTTTCTT	2987243	True	NA	16	True	AATAAA	-16	NA	2999893	3019755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_3000086_3006467_3006560_3010024_3010190_3012543_3012675_3015529_3015644_3016883_3016986_3019478
transcript_166466.nnic	chr6	+	1168	7	NNC	ENSG00000124588.22	novel	1073	7	NA	NA	-127	0	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_2	443.172433208064	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGATACTTTTTTCTT	2999744	False	NA	16	True	AATAAA	-16	NA	2999766	3019755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_3000086_3006467_3006560_3010056_3010190_3012543_3012675_3015529_3015644_3016883_3016986_3019478
transcript_166469.known	chr6	+	1021	7	FSM	ENSG00000124588.22	ENST00000380441.5	1021	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	591.131589035433	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGATACTTTTTTCTT	2999955	False	NA	16	True	AATAAA	-16	NA	2999988	3019755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_3000086_3004494_3004652_3006467_3006560_3010024_3010190_3012543_3012675_3016883_3016986_3019478
transcript_166477.known	chr6	+	851	6	FSM	ENSG00000124588.22	ENST00000380454.8	851	6	0	0	0	0	multi-exon	FALSE	canonical	3	381	junction_4	367.097044390172	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGATACTTTTTTCTT	2999968	False	NA	16	True	AATAAA	-16	NA	3000001	3019755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_3000086_3006467_3006560_3010024_3010190_3012543_3012675_3016883_3016986_3019478
transcript_166490.known	chr6	+	1573	3	FSM	ENSG00000244041.7	ENST00000605901.1	1573	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	2	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCGTTTCTCTGTAAC	2988229	True	NA	9	True	AATAAA	-23	NA	2988647	2991173	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_2988710_2989527_2989734_2989868
transcript_166492.known	chr6	+	2811	2	FSM	ENSG00000244041.7	ENST00000445000.2	2811	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCGTTTCTCTGTAAC	2987783	True	NA	9	True	AATAAA	-23	NA	2987966	2991173	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_2988032_2988427
transcript_166494.nic	chr6	+	2999	11	NIC	ENSG00000137275.16	novel	4454	13	NA	NA	0	-1114	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	19.0286625909442	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATTTATATTGAGTCTT	3062544	True	NA	NA	False	ATTAAA	-23	NA	3063833	3114036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_3064060_3076763_3076988_3077778_3077936_3080978_3081117_3083084_3083314_3085258_3085409_3089580_3089658_3104224_3104316_3105481_3106052_3110802_3110956_3113052
transcript_166495.nic	chr6	+	4393	11	NIC	ENSG00000137275.16	novel	4454	13	NA	NA	-233	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	19.0286625909442	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGGCTATTGATGTGAT	3063495	False	NA	5	True	AATAAA	-15	NA	3063590	3115187	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_3064060_3076763_3076988_3077778_3077936_3080978_3081117_3083084_3083314_3085258_3085409_3089580_3089658_3104224_3104316_3105481_3106052_3110802_3110956_3113052
transcript_166498.known	chr6	+	4092	11	FSM	ENSG00000137275.16	ENST00000259808.9	4092	11	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	12.6822710899902	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGGCTATTGATGTGAT	3067696	True	NA	5	True	AATAAA	-15	NA	3068493	3115187	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_3068662_3076763_3076988_3077778_3077936_3080978_3081117_3083084_3083314_3085258_3085409_3089580_3089658_3104224_3104316_3105481_3106052_3110802_3110956_3113052
transcript_166509.known	chr6	-	850	1	FSM	ENSG00000272277.1	ENST00000606441.1	850	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCGGGCGCGGTTGTTCA	-3068694	True	NA	-8	True	AATAAA	-15	NA	3068894	3068044	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_3068000_3068900
transcript_16651.known	chr1	+	1528	9	FSM	ENSG00000132196.16	ENST00000254521.8	1528	9	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_2	17.1227188261678	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTCCTTCCTTTTGGAA	162789243	True	NA	1	True	AATAAA	-19	NA	162790701	162812823	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_162790836_162792658_162792863_162796584_162796678_162797801_162797917_162799742_162799938_162803430_162803536_162804266_162804324_162805393_162805493_162812297
transcript_166510.known	chr6	+	1909	7	FSM	ENSG00000137274.13	ENST00000380379.10	1909	7	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_3	22.1409625405542	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTAGCAAGTTAAACCTTG	3116655	True	NA	-11	True	AATAAA	-3	NA	3118710	3153578	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_3118848_3123656_3123761_3127241_3127409_3129044_3129199_3137361_3137494_3140385_3140510_3152487
transcript_166511.known	chr6	-	1616	4	FSM	ENSG00000137267.7	ENST00000333628.4	1616	4	0	0	0	0	multi-exon	FALSE	canonical	3	1495	junction_2	37.1423687391576	2137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGGTCTGTGTTCTCA	-3136531	True	NA	-11	True	AATAAA	-18	NA	3157544	3153665	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_3154924_3155624_3155736_3156043_3156153_3157406
transcript_166512.known	chr6	-	817	4	FSM	ENSG00000137267.7	ENST00000489942.1	817	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	699.632919624443	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACATCTGCTTCCGCACC	-3136513	True	NA	NA	False	AAAACA	-37	NA	3157526	3154578	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_3155056_3155624_3155736_3156043_3156153_3157406
transcript_166513.known	chr6	-	1912	3	FSM	ENSG00000137267.7	ENST00000679907.1	1912	3	0	0	0	0	multi-exon	FALSE	canonical	3	1519	junction_2	32	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTAGAAAACCTTGTGGT	-3136530	True	NA	-22	True	AATAAA	-7	NA	3157543	3153676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_3154924_3155624_3156153_3157406
transcript_166514.known	chr6	-	2284	3	FSM	ENSG00000137267.7	ENST00000680036.1	2284	3	0	0	0	0	multi-exon	FALSE	canonical	3	1495	junction_1	12	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATCTATACTAATAAAAAAG	-3136531	True	NA	-44	True	NA	NA	NA	3157544	3153698	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_3155736_3156043_3156153_3157406
transcript_166516.known	chr6	+	778	4	FSM	ENSG00000180822.12	ENST00000324987.4	778	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	309.134634459198	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGCTGTGAGTGATAGA	3250159	True	NA	NA	False	NA	NA	NA	3258976	3267920	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_3259197_3263683_3263760_3264173_3264326_3267590
transcript_166518.known	chr6	+	629	4	FSM	ENSG00000180822.12	ENST00000419065.6	629	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	299.031027747215	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTCATCAGGCCGCGCT	3250134	True	NA	15	True	AATAAA	-15	NA	3258951	3267781	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_3259197_3263683_3263760_3264208_3264326_3267590
transcript_166520.known	chr6	-	1922	4	FSM	ENSG00000137285.11	ENST00000259818.8	1922	4	0	0	0	0	multi-exon	FALSE	canonical	3	2737	junction_3	60.4207469886517	1326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTACTTGAAAGCACAGT	-3171414	True	NA	-17	True	AATAAA	-16	NA	3227653	3224276	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_3225812_3226158_3226270_3226560_3226670_3227486
transcript_166522.known	chr6	+	785	3	FSM	ENSG00000180822.12	ENST00000438998.7	785	3	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_2	50	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGATTTGTGTGTGCAT	3250129	True	NA	8	True	ATTAAA	-17	NA	3258946	3268049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_3259197_3263683_3263760_3267590
transcript_166523.known	chr6	-	3070	3	FSM	ENSG00000137285.11	ENST00000681757.1	3070	3	0	0	0	0	multi-exon	FALSE	canonical	3	2737	junction_2	73	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTGAGCTAGTTTCTCA	-3227536	False	NA	NA	False	GATAAA	-36	NA	3227557	3223323	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_3225812_3226158_3226670_3227486
transcript_166528.known	chr6	+	4603	2	FSM	ENSG00000180822.12	ENST00000473000.2	4603	2	0	0	0	0	multi-exon	FALSE	canonical	3	690	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGATTTGTGTGTGCATT	3250143	True	NA	9	True	ATTAAA	-18	NA	3258960	3268050	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_3259197_3263683
transcript_166529.known	chr6	+	489	2	FSM	ENSG00000180822.12	ENST00000380305.4	489	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTGTCATCAGGCCGCG	3250079	True	NA	13	True	AATAAA	-13	NA	3258896	3267779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_3259197_3267590
transcript_166532.nnic	chr6	-	2440	6	NNC	ENSG00000168994.14	novel	1878	5	NA	NA	-449	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	11.3030969207558	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGATCTGTCCAGGATG	NA	False	NA	-17	True	AATAAA	-13	NA	3752162	3722619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_3723737_3727550_3727663_3737078_3737197_3737616_3737731_3738056_3738149_3751275
transcript_166535.known	chr6	-	1878	5	FSM	ENSG00000168994.14	ENST00000380283.5	1878	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	3.53553390593274	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGATCTGTCCAGGATGT	-3751698	False	89	-16	True	AATAAA	-14	NA	3751713	3722618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_3723737_3727550_3727663_3737078_3737197_3738056_3738149_3751275
transcript_166536.known	chr6	+	1643	2	FSM	ENSG00000145945.7	ENST00000648326.1	1643	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGTTTTGGTTAATTTA	3849129	True	NA	8	True	AATAAA	-18	NA	3849372	3851317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_3849487_3849788
transcript_166538.known	chr6	+	1935	1	FSM	ENSG00000145945.7	ENST00000380274.2	1935	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTTGGTTAATTTATTT	3849142	True	NA	11	True	AATAAA	-21	NA	3849385	3851320	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_3849400_3851300
transcript_166543.known	chr6	+	7517	15	FSM	ENSG00000112739.17	ENST00000337659.11	7517	15	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_4	31.5681963439181	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGTCTCCTGGTTTTTTT	4010677	True	NA	6	True	AATAAA	-19	NA	4021299	4064983	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_4021467_4031558_4032756_4037396_4037571_4040771_4040928_4042486_4042569_4043812_4044024_4047174_4047249_4049015_4049107_4049731_4049880_4051956_4052095_4052719_4052874_4056320_4056436_4057035_4057188_4058727_4058815_4060412
transcript_166546.known	chr6	-	1405	10	FSM	ENSG00000198721.13	ENST00000380125.6	1405	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	213.088980428944	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGGTGTTTGGTAGTAGA	-4135457	False	NA	-7	True	AATAAA	-30	NA	4135468	4115692	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_4116030_4117307_4117452_4119185_4119276_4125249_4125371_4126134_4126238_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133702_4135369
transcript_166547.known	chr6	-	1380	10	FSM	ENSG00000198721.13	ENST00000361538.6	1380	10	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_9	122.710137224998	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAAGAATTCACACAGGT	-4125441	True	NA	-20	True	AATAAA	-17	NA	4135597	4115705	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_4116030_4117307_4117452_4119185_4119276_4125249_4125371_4126134_4126238_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133702_4135510
transcript_166548.known	chr6	-	1368	10	FSM	ENSG00000198721.13	ENST00000380118.8	1368	10	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_9	111.588529876507	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAAGAATTCACACAGGT	-4125419	True	NA	-20	True	AATAAA	-17	NA	4135575	4115705	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_4116030_4117307_4117452_4119185_4119276_4125249_4125371_4126134_4126238_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133712_4135510
transcript_166553.nnic	chr6	-	1316	9	NIC	ENSG00000198721.13	novel	1380	10	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	3	57	junction_2	223.650396825045	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAAGAATTCACACAGGT	-4125467	True	NA	-20	True	AATAAA	-17	NA	4135623	4115705	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_4116030_4117307_4117452_4125249_4125371_4126134_4126238_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133702_4135510
transcript_166554.nnic	chr6	-	1329	9	NIC	ENSG00000198721.13	novel	1368	10	NA	NA	-29	0	combination_of_known_splicesites	FALSE	canonical	3	57	junction_2	218.759249804437	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAAGAATTCACACAGGT	-4125470	True	NA	-20	True	AATAAA	-17	NA	4135626	4115705	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_4116030_4117307_4117452_4125249_4125371_4126134_4126238_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133712_4135510
transcript_166561.known	chr6	-	558	4	FSM	ENSG00000198721.13	ENST00000489086.1	558	4	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_3	173.636273732062	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCACACAAAAGCTGTAGAG	-4125417	True	NA	NA	False	NA	NA	NA	4135573	4130317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_4130561_4130766_4130866_4133548_4133702_4135510
transcript_166564.nic	chr6	+	327	2	ISM	ENSG00000112739.17	ENST00000480058.5	6775	16	-31	33328	-31	-12572	5prime_fragment	FALSE	canonical	3	340	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGCATAAACACAGAAGTA	4021198	True	NA	71	True	NA	NA	NA	4021235	4031654	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_4021467_4031558
transcript_166565.nic	chr6	+	433	2	ISM	ENSG00000112739.17	ENST00000480058.5	6775	16	-31	33222	-31	-12466	5prime_fragment	FALSE	canonical	3	340	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTATTGATGCTTCTGA	4021198	True	NA	NA	False	CATAAA	-34	NA	4021235	4031760	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_4021467_4031558
transcript_166568.nic	chr6	+	995	2	ISM	ENSG00000112739.17	ENST00000480058.5	6775	16	-31	32660	-31	-11904	5prime_fragment	FALSE	canonical	3	340	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAATCAAAAGATAGGAAA	4021198	True	NA	-6	True	GATAAA	-2	NA	4021235	4032322	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_4021467_4031558
transcript_166569.known	chr6	-	1133	8	FSM	ENSG00000198721.13	ENST00000478266.6	1133	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	246.796867641287	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAAGAATTCACACAGGT	-4125408	True	NA	-20	True	AATAAA	-17	NA	4135564	4115705	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_4116030_4117307_4117452_4119185_4119276_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133712_4135510
transcript_166572.nic	chr6	+	1966	7	NIC	ENSG00000153046.18	novel	690	4	NA	NA	-18	-118	combination_of_known_junctions	FALSE	canonical	3	219	junction_1	24.1919408068059	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGTCCAAACGTCATT	4765061	True	NA	10	True	AATAAA	-13	NA	4773022	4954255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_4773179_4891712_4892380_4935514_4935772_4937564_4937738_4943545_4943757_4952265_4952410_4953897
transcript_166573.nic	chr6	+	2757	7	NIC	ENSG00000153046.18	novel	690	4	NA	NA	-25	459	combination_of_known_junctions	FALSE	canonical	3	219	junction_1	24.1919408068059	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTATGTTTATAAAGT	4764984	True	NA	NA	False	AATAAA	-2	NA	4772945	4954969	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_4773179_4891712_4892380_4935514_4935772_4937564_4937738_4943545_4943757_4952265_4952410_4953897
transcript_166574.nic	chr6	+	3332	7	NIC	ENSG00000153046.18	novel	690	4	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	219	junction_1	24.1919408068059	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAATGTTTCTCTGATT	4764984	True	NA	38	True	AATAAA	-20	NA	4772945	4955544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_4773179_4891712_4892380_4935514_4935772_4937564_4937738_4943545_4943757_4952265_4952410_4953897
transcript_166576.nnic	chr6	+	3266	7	NNC	ENSG00000153046.18	novel	690	4	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	89.2910347621131	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAATGTTTCTCTGATT	4764984	True	NA	38	True	AATAAA	-20	NA	4772945	4955544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_4773179_4891712_4892380_4935580_4935772_4937564_4937738_4943545_4943757_4952265_4952410_4953897
transcript_166578.nic	chr6	+	1299	4	NIC	ENSG00000153046.18	novel	690	4	NA	NA	-25	-5891	combination_of_known_junctions	FALSE	canonical	3	219	junction_1	22.4251842554055	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAAGCACTAAAATGGCA	4764984	True	NA	NA	False	NA	NA	NA	4772945	4937706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_4773179_4891712_4892380_4935514_4935772_4937564
transcript_166579.known	chr6	+	773	2	FSM	ENSG00000153046.18	ENST00000483019.1	773	2	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGCCACAGGCTTAGCTG	4765079	True	NA	-32	True	NA	NA	NA	4773040	4892347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_4773179_4891712
transcript_166585.known	chr6	-	1042	8	FSM	ENSG00000124787.14	ENST00000464646.1	1042	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	83.5615378762556	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAATTAAAAATCG	-5002797	False	861	-36	True	NA	NA	NA	5003658	4995077	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_4995277_4995950_4996086_4996221_4996421_4998715_4998842_4999808_4999905_5000562_5000632_5002100_5002246_5003585
transcript_166586.known	chr6	-	1488	8	FSM	ENSG00000124787.14	ENST00000380051.7	1488	8	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_3	44.3395985547907	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGGCCAGTCCCTGTTGT	-5003176	True	NA	NA	False	AATAAA	-18	NA	5004037	4994716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_4995277_4995950_4996086_4996221_4996421_4998715_4998842_4999808_4999905_5000562_5000632_5002100_5002246_5003879
transcript_166588.known	chr6	-	1088	7	FSM	ENSG00000124787.14	ENST00000319533.9	1088	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	81.1521205309305	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACGCTTGCTTTCAGAT	-5003175	True	NA	-5	True	AATAAA	-24	NA	5004036	4995046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_4995277_4995950_4996086_4996221_4996421_4998715_4998842_4999808_4999905_5002100_5002246_5003879
transcript_166590.known	chr6	-	1056	7	FSM	ENSG00000124787.14	ENST00000618533.4	1056	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	73.1110266801269	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTACGCTTGCTTTCAG	-5003202	True	NA	-7	True	AATAAA	-22	NA	5004063	4995048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_4995277_4995950_4996086_4996221_4996421_4999808_4999905_5000562_5000632_5002100_5002246_5003879
transcript_166592.known	chr6	+	1732	3	FSM	ENSG00000272142.4	ENST00000671039.1	1732	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCCCTCTCGCTCTGCCT	5003549	True	NA	NA	False	AAAAAG	-14	NA	5003777	5043962	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_5003960_5021380_5021474_5042505
transcript_166593.known	chr6	-	1497	3	FSM	ENSG00000214113.11	ENST00000330636.9	1497	3	0	0	0	0	multi-exon	FALSE	canonical	3	569	junction_1	47	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTGGAAACAGATTCATT	-5256420	True	NA	-7	True	AATAAA	-22	NA	5260950	5108418	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_5109492_5216617_5216739_5260647
transcript_166595.known	chr6	-	592	3	FSM	ENSG00000214113.11	ENST00000500576.4	592	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	315.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGTGCTTTTGTAGAT	-5260632	False	NA	-3	True	AATAAA	-17	NA	5260737	5186599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_5186981_5216617_5216739_5260647
transcript_166596.nic	chr6	-	2017	2	ISM	ENSG00000214113.11	ENST00000500576.4	592	3	-228	28440	-15	21244	5prime_fragment	FALSE	canonical	3	663	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAAACTGGCCCTCATCT	-5260860	False	NA	NA	False	NA	NA	NA	5260965	5215039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_5216739_5260647
transcript_166599.known	chr6	+	1692	7	FSM	ENSG00000145982.13	ENST00000324331.10	1692	7	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_1	39.279624347604	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACCACTTCACTCAGGC	5260953	False	NA	NA	False	NA	NA	NA	5261043	5771429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_5261359_5368549_5369183_5404541_5404702_5431040_5431173_5545179_5545341_5613168_5613321_5771290
transcript_16660.known	chr1	-	5670	5	FSM	ENSG00000143248.13	ENST00000313961.10	5670	5	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_1	7.64852927038918	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATGAGTCCTCCTTGAC	-163202122	True	NA	-1	True	ATTAAA	-21	NA	163202916	163142298	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_163147504_163152549_163152717_163161914_163161977_163168257_163168369_163202791
transcript_166600.known	chr6	+	1679	7	FSM	ENSG00000145982.13	ENST00000274680.9	1679	7	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_3	13.3218700722617	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGACATAGCATTTGTCTT	5260093	True	NA	9	True	AATAAA	-20	NA	5261512	5771583	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_5261661_5368549_5369183_5404541_5404702_5431040_5431173_5545179_5545341_5613168_5613321_5771290
transcript_166601.known	chr6	-	3828	15	FSM	ENSG00000124491.16	ENST00000264870.8	3828	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2.0861545523586	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATCTGTGCAGAAGTG	-6320579	True	NA	NA	False	AATAAA	-16	NA	6320662	6144083	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_6145773_6151812_6151950_6167457_6167619_6174579_6174868_6181987_6182142_6195796_6195886_6197222_6197327_6222032_6222172_6224685_6224861_6248311_6248420_6250810_6250930_6266557_6266810_6305350_6305540_6318534_6318683_6320586
transcript_166603.known	chr6	-	1808	10	FSM	ENSG00000124783.14	ENST00000474597.5	1808	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	329.489841354108	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTATGAATCTCTTGCTG	-7300281	True	NA	NA	False	AATAAA	-22	NA	7313207	7268305	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_7269155_7289867_7289932_7295087_7295103_7295391_7295486_7297922_7298002_7298746_7298824_7301309_7301573_7303549_7303638_7309916_7310030_7313041
transcript_166605.known	chr6	-	1640	10	FSM	ENSG00000124783.14	ENST00000650389.1	1640	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	291.347232484785	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCCAGGCCGAGCAGTGC	-7300294	True	NA	NA	False	NA	NA	NA	7313220	7268532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_7269155_7287861_7287923_7289867_7289932_7295391_7295486_7297922_7298002_7298746_7298824_7301309_7301573_7303549_7303638_7309916_7310030_7313041
transcript_166607.known	chr6	-	3248	9	FSM	ENSG00000124783.14	ENST00000397511.6	3248	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	303.367351572314	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTGTATAGCTTCCTC	-7300272	True	NA	-11	True	CATAAA	-14	NA	7313198	7287569	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_7289932_7295087_7295103_7295391_7295486_7297922_7298002_7298746_7298824_7301309_7301573_7303549_7303638_7309916_7310030_7313041
transcript_166612.known	chr6	-	9661	8	FSM	ENSG00000124783.14	ENST00000244763.9	9661	8	0	0	0	0	multi-exon	FALSE	canonical	3	685	junction_4	13.3920475945805	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTGTGCAACATGAAATG	-7300273	True	NA	-14	True	ATTAAA	-17	NA	7313199	7281142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_7289932_7295391_7295486_7297922_7298002_7298746_7298824_7301309_7301573_7303549_7303638_7309916_7310030_7313041
transcript_166615.known	chr6	-	1893	8	FSM	ENSG00000124783.14	ENST00000489567.5	1893	8	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_5	241.935477989906	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGAAGTAAAATAGTATGAA	-7300248	True	NA	-27	True	NA	NA	NA	7313174	7288681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_7289932_7295391_7295486_7297922_7298002_7298746_7298824_7301309_7301369_7303549_7303638_7309916_7310030_7313041
transcript_166621.known	chr6	-	1118	8	FSM	ENSG00000124783.14	ENST00000479365.5	1118	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	246.187749823717	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGTTTTTTTTTAAACC	-7300256	True	NA	-55	True	NA	NA	NA	7313182	7289675	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_7289932_7295384_7295486_7297922_7298002_7298746_7298824_7301309_7301573_7303549_7303638_7309916_7310030_7313041
transcript_166625.known	chr6	+	2498	17	FSM	ENSG00000124784.9	ENST00000379834.7	2498	17	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_3	39.9107891897667	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTGGCATATTCATTCA	7384043	True	NA	10	True	CATAAA	-17	NA	7389807	7418037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_7390074_7393098_7393304_7395052_7395144_7396702_7396773_7398697_7398741_7400957_7401051_7402602_7402716_7402816_7402898_7403940_7404028_7404417_7404556_7404917_7405022_7405248_7405356_7410385_7410452_7411331_7411452_7412888_7412943_7414237_7414391_7417330
transcript_166633.nic	chr6	+	1814	16	ISM	ENSG00000124784.9	ENST00000379834.7	2498	17	-23	3647	-8	2823	5prime_fragment	TRUE	canonical	3	327	junction_3	41.0607138542698	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGCAATGAAATACCTTC	7384020	True	NA	NA	False	GATAAA	-4	NA	7389784	7414390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_7390074_7393098_7393304_7395052_7395144_7396702_7396773_7398697_7398741_7400957_7401051_7402602_7402716_7402816_7402898_7403940_7404028_7404417_7404556_7404917_7405022_7405248_7405356_7410385_7410452_7411331_7411452_7412888_7412943_7414237
transcript_16664.known	chr1	-	851	5	FSM	ENSG00000143248.13	ENST00000530507.5	851	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	113.588071556832	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGATATCTTCAGCTTGT	-163202872	False	NA	-47	True	NA	NA	NA	163202903	163147116	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_163147504_163152537_163152717_163161914_163161977_163168257_163168369_163202791
transcript_166640.nic	chr6	+	1907	15	NIC	ENSG00000124784.9	novel	2498	17	NA	NA	0	2823	intron_retention	FALSE	canonical	3	327	junction_3	40.3254616482299	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGCAATGAAATACCTTC	7384028	True	NA	NA	False	GATAAA	-4	NA	7389792	7414390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_7390074_7393098_7393304_7395052_7395144_7396702_7396773_7398697_7398741_7400957_7401051_7402602_7402898_7403940_7404028_7404417_7404556_7404917_7405022_7405248_7405356_7410385_7410452_7411331_7411452_7412888_7412943_7414237
transcript_166643.nnic	chr6	-	942	2	FSM	ENSG00000261189.2	ENST00000690863.1	911	2	-31	0	-31	0	multi-exon	FALSE	canonical	3	7	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGCCGCTAATTACCTTC	-7543098	True	NA	-1	True	AATAAA	-18	NA	7543112	7540453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_7541054_7542770
transcript_166644.known	chr6	+	7812	24	FSM	ENSG00000096696.15	ENST00000418664.2	7812	24	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_23	40.1124600566438	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTTGTGTTTTAATTT	7539992	True	NA	19	True	AATAAA	-15	NA	7541616	7586572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_7542086_7555717_7555821_7558115_7558265_7559225_7559401_7562651_7562781_7563735_7563787_7565358_7565521_7566376_7566482_7567353_7567450_7567780_7567907_7568436_7568590_7569185_7569341_7570436_7570564_7571382_7571585_7571841_7572069_7574085_7574253_7574656_7574796_7575294_7575489_7576293_7576457_7576958_7577043_7577778_7577887_7578463_7578563_7579274_7579773_7582641
transcript_166645.known	chr6	+	9697	24	FSM	ENSG00000096696.15	ENST00000379802.8	9697	24	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_2	35.5429397645686	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTGGTCTTTTGAAGTT	7541061	True	NA	14	True	ATTAAA	-28	NA	7541670	7586714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_7542086_7555717_7555821_7558115_7558265_7559225_7559401_7562651_7562781_7563735_7563787_7565358_7565521_7566376_7566482_7567353_7567450_7567780_7567907_7568436_7568590_7569185_7569341_7570436_7570564_7571382_7571585_7571841_7572069_7574085_7574253_7574656_7574796_7575294_7575489_7576293_7576457_7576958_7577043_7577778_7577887_7578463_7578563_7579274_7581570_7582641
transcript_166647.nic	chr6	+	3894	23	ISM	ENSG00000096696.15	ENST00000418664.2	7812	24	-280	7067	-280	3654	5prime_fragment	FALSE	canonical	3	125	junction_2	36.0582632292161	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTCAATGAGAAGATCAC	7541142	False	NA	-33	True	AATAAA	-2	NA	7541336	7579505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_7542086_7555717_7555821_7558115_7558265_7559225_7559401_7562651_7562781_7563735_7563787_7565358_7565521_7566376_7566482_7567353_7567450_7567780_7567907_7568436_7568590_7569185_7569341_7570436_7570564_7571382_7571585_7571841_7572069_7574085_7574253_7574656_7574796_7575294_7575489_7576293_7576457_7576958_7577043_7577778_7577887_7578463_7578563_7579274
transcript_166648.nic	chr6	+	3968	23	ISM	ENSG00000096696.15	ENST00000418664.2	7812	24	-291	7004	-291	3717	5prime_fragment	TRUE	canonical	3	125	junction_2	36.0582632292161	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTGGAAGACAGATTTGA	7541131	True	NA	30	True	AAGAAA	-2	NA	7541325	7579568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_7542086_7555717_7555821_7558115_7558265_7559225_7559401_7562651_7562781_7563735_7563787_7565358_7565521_7566376_7566482_7567353_7567450_7567780_7567907_7568436_7568590_7569185_7569341_7570436_7570564_7571382_7571585_7571841_7572069_7574085_7574253_7574656_7574796_7575294_7575489_7576293_7576457_7576958_7577043_7577778_7577887_7578463_7578563_7579274
transcript_166651.nic	chr6	+	3636	17	ISM	ENSG00000096696.15	ENST00000418664.2	7812	24	-902	11778	-902	-1057	5prime_fragment	FALSE	canonical	3	125	junction_2	29.8137447329248	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAACTTGAAAGCTTATAA	NA	False	NA	7	True	GATAAA	-27	NA	7540714	7574794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_7542086_7555717_7555821_7558115_7558265_7559225_7559401_7562651_7562781_7563735_7563787_7565358_7565521_7566376_7566482_7567353_7567450_7567780_7567907_7568436_7568590_7569185_7569341_7570436_7570564_7571382_7571585_7571841_7572069_7574085_7574253_7574656
transcript_166654.nic	chr6	+	2538	15	ISM	ENSG00000096696.15	ENST00000418664.2	7812	24	-280	14675	-280	3404	5prime_fragment	FALSE	canonical	3	125	junction_2	24.7093306345632	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAATTGAAACCAACAGAGA	7541142	False	NA	-1	True	AATAAA	-1	NA	7541336	7571897	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_7542086_7555717_7555821_7558115_7558265_7559225_7559401_7562651_7562781_7563735_7563787_7565358_7565521_7566376_7566482_7567353_7567450_7567780_7567907_7568436_7568590_7569185_7569341_7570436_7570564_7571382_7571585_7571841
transcript_166656.nic	chr6	+	1562	8	ISM	ENSG00000096696.15	ENST00000418664.2	7812	24	-291	20163	-291	592	5prime_fragment	FALSE	canonical	3	125	junction_2	20.4899178791394	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGCTCAATAAGCTGAAACA	7541131	True	NA	NA	False	AAGAAA	-3	NA	7541325	7566409	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_7542086_7555717_7555821_7558115_7558265_7559225_7559401_7562651_7562781_7563735_7563787_7565358_7565521_7566376
transcript_166662.known	chr6	+	4174	9	FSM	ENSG00000168566.13	ENST00000342415.6	4174	9	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_8	12.9801531192818	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTTATTAGTGATTGT	7585787	True	NA	9	True	ATTAAA	-22	NA	7590197	7611967	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_7590414_7593733_7593848_7594098_7594160_7595026_7595102_7601335_7601525_7602622_7602745_7605397_7605487_7606030_7606196_7608824
transcript_166667.nic	chr6	+	990	8	ISM	ENSG00000168566.13	ENST00000342415.6	4174	9	0	5813	0	733	5prime_fragment	FALSE	canonical	3	97	junction_1	11.1702958870426	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAAGGATAAAAACTGTGA	7585787	True	NA	4	True	CATAAA	-16	NA	7590197	7606154	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_7590414_7593733_7593848_7594098_7594160_7595026_7595102_7601335_7601525_7602622_7602745_7605397_7605487_7606030
transcript_166670.known	chr6	-	3030	13	FSM	ENSG00000259040.5	ENST00000439343.2	3030	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	495.681097077546	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAAGTCTGGTCTTTCCTT	-8059357	True	NA	-8	True	AATAAA	-12	NA	8064364	7881521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_7883267_7884358_7884489_7885960_7886044_7888704_7888849_7889494_7889582_7891620_7891737_7895105_7895203_7899575_7899682_7904573_7904724_8026366_8026426_8041138_8041269_8062533_8062617_8064264
transcript_166676.known	chr6	-	1301	10	FSM	ENSG00000239264.9	ENST00000473453.2	1301	10	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_9	305.886971782345	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACACAGTTGGAGGTCACC	-7910063	False	15697	NA	False	NA	NA	NA	7910077	7883143	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_7883267_7884358_7884489_7885960_7886044_7888704_7888849_7889494_7889582_7891620_7891737_7895105_7895203_7899575_7899682_7904573_7904724_7909812
transcript_166678.known	chr6	-	2938	10	FSM	ENSG00000239264.9	ENST00000379757.9	2938	10	0	0	0	0	multi-exon	FALSE	canonical	3	1137	junction_1	117.387403366527	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGTCTTTCCTTCAATG	-7895091	True	NA	-3	True	AATAAA	-17	NA	7910788	7881516	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_7883267_7884358_7884489_7885960_7886044_7888704_7888849_7889494_7889582_7891620_7891737_7895105_7895203_7899575_7899682_7904573_7904724_7910513
transcript_16668.known	chr1	+	1842	14	FSM	ENSG00000143228.13	ENST00000367900.7	1842	14	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	43.156519867809	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTTGTTTTGTTTATT	163317326	True	NA	38	True	AATATA	-24	NA	163321934	163355764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_163322067_163326031_163326175_163327487_163327563_163328227_163328305_163328845_163328908_163336750_163336849_163338019_163338094_163339380_163339478_163340363_163340427_163343732_163343871_163345677_163345819_163347762_163347939_163348944_163349081_163355334
transcript_166681.nnic	chr6	-	2848	9	NIC	ENSG00000239264.9	novel	2938	10	NA	NA	-54	0	combination_of_known_splicesites	FALSE	canonical	3	72	junction_3	415.273535606352	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGTCTTTCCTTCAATG	-7895145	True	NA	-3	True	AATAAA	-17	NA	7910842	7881516	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_7883267_7884358_7884489_7885960_7886044_7889494_7889582_7891620_7891737_7895105_7895203_7899575_7899682_7904573_7904724_7910513
transcript_166683.known	chr6	-	2445	6	FSM	ENSG00000188428.20	ENST00000244777.6	2445	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	133.63382805263	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTGAGATTTTTTTCAA	-8059386	True	NA	NA	False	ATTAAA	-23	NA	8064393	8013977	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_8015829_8026366_8026426_8027206_8027400_8041138_8041269_8062533_8062617_8064264
transcript_166684.known	chr6	-	1273	6	FSM	ENSG00000188428.20	ENST00000627748.2	1273	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	136.877463448151	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCATATTTTACAGTGCA	-8059389	True	NA	NA	False	NA	NA	NA	8064396	8015062	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_8015829_8026366_8026426_8041138_8041269_8054269_8054373_8062533_8062617_8064264
transcript_166686.known	chr6	-	2659	5	FSM	ENSG00000188428.20	ENST00000397457.7	2659	5	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_3	34.2810078614967	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTTGTTTATTATTCCA	-8059382	True	NA	-1	True	AATAAA	-13	NA	8064389	8013566	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_8015829_8026366_8026426_8041138_8041269_8062533_8062617_8064264
transcript_16669.known	chr1	+	1964	14	FSM	ENSG00000143228.13	ENST00000271452.8	1964	14	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	35.1008690194012	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATGGCTGTTGTTTTGT	163317345	True	NA	33	True	AGTAAA	-45	NA	163321953	163355759	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_163322213_163326031_163326175_163327487_163327563_163328227_163328305_163328845_163328908_163336750_163336849_163338019_163338094_163339380_163339478_163340363_163340427_163343732_163343871_163345677_163345819_163347762_163347939_163348944_163349081_163355334
transcript_166692.known	chr6	-	368	4	FSM	ENSG00000188428.20	ENST00000543936.7	368	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	135.884755092934	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAGCCATGGAAAGGCT	-8059378	True	NA	NA	False	NA	NA	NA	8064385	8015723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_8015829_8026366_8026426_8062533_8062617_8064264
transcript_166694.known	chr6	-	562	4	FSM	ENSG00000124802.12	ENST00000429723.6	562	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	891.462219552174	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGGAATCAGTTTTTAC	-8081972	True	NA	2	True	CATAAA	-16	NA	8102548	8073359	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_8073511_8090185_8090282_8097266_8097468_8102434
transcript_166695.known	chr6	-	591	4	FSM	ENSG00000124802.12	ENST00000502429.5	591	4	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	854.448880208108	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACATTATTTTGAATTTT	-8081905	False	NA	NA	False	NA	NA	NA	8102481	8078493	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_8078741_8090185_8090282_8097266_8097468_8102434
transcript_166696.known	chr6	-	1047	4	FSM	ENSG00000124802.12	ENST00000379715.10	1047	4	0	0	0	0	multi-exon	FALSE	canonical	3	1549	junction_1	189.436591560929	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTCGTTGTTTCTTTCT	-8081972	True	NA	-2	True	AGTAAA	-17	NA	8102548	8079394	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_8080031_8090185_8090282_8097266_8097468_8102434
transcript_166701.known	chr6	-	654	3	FSM	ENSG00000124802.12	ENST00000507463.1	654	3	0	0	0	0	multi-exon	FALSE	canonical	3	1777	junction_2	118	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGCATTTTCAGCTTAT	-8081983	True	NA	1	True	AATAAA	-33	NA	8102559	8089953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_8090282_8097266_8097468_8102434
transcript_166707.known	chr6	-	3566	11	FSM	ENSG00000124786.12	ENST00000644923.2	3566	11	0	0	0	0	multi-exon	TRUE	canonical	3	78	junction_4	12.8296531519757	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCCTCTACACTTTCCT	-8432358	True	NA	NA	False	TATAAA	-21	NA	8435545	8411434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_8413700_8414907_8414978_8416883_8416996_8417401_8417495_8419579_8419678_8420720_8420829_8422469_8422625_8427936_8428059_8429863_8430158_8434384_8434431_8435342
transcript_166708.nnic	chr6	-	1859	11	NNC	ENSG00000124786.12	novel	2137	11	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_10	27.8174405724179	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTTAATAGAATTTTG	-8432380	True	NA	-1	True	AATAAA	-24	NA	8435567	8413067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_8413700_8414907_8414978_8416883_8416996_8417401_8417495_8419579_8419678_8420720_8420829_8422469_8422625_8427936_8428059_8429863_8430158_8434384_8434431_8435438
transcript_166709.known	chr6	-	1911	10	FSM	ENSG00000124786.12	ENST00000648987.1	1911	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_9	32.2524762184584	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAGGCTGACAAGTGAG	-8432084	False	NA	NA	False	NA	NA	NA	8435271	8412884	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_8413700_8414907_8414978_8416883_8416996_8417401_8417495_8419579_8419678_8420720_8420829_8422469_8422625_8427936_8428059_8429863_8430158_8435227
transcript_166710.nic	chr6	-	1909	10	NIC	ENSG00000124786.12	novel	3566	11	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_9	21.1660104885167	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTTAATAGAATTTTG	-8432380	True	NA	-1	True	AATAAA	-24	NA	8435567	8413067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_8413700_8414907_8414978_8416883_8416996_8417401_8417495_8419579_8419678_8420720_8420829_8422469_8422625_8427936_8428059_8429863_8430158_8435342
transcript_166719.nnic	chr6	-	2400	5	NNC	ENSG00000124786.12	novel	3566	11	NA	NA	-6	-11937	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	41.0327613011847	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTGAATTTATTTCTG	-8432380	True	NA	NA	False	AATAAA	-19	NA	8435567	8425010	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_8426724_8427936_8428059_8429863_8430158_8434384_8434431_8435342
transcript_166735.known	chr6	+	1108	5	FSM	ENSG00000111846.20	ENST00000397423.7	1108	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	130.637619007696	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTGTAGATAATACTGT	10521284	True	NA	NA	False	AGTAAA	-5	NA	10521331	10626947	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_10521418_10527473_10527661_10528630_10528842_10621350_10621444_10626416
transcript_166736.known	chr6	+	4505	5	FSM	ENSG00000111846.20	ENST00000495262.7	4505	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	130.196966170491	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGGGATACTGTGTATT	10521303	True	NA	14	True	AATAAA	-19	NA	10521350	10629368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_10521418_10527473_10527661_10528630_10529837_10621350_10621444_10626416
transcript_166738.known	chr6	+	547	4	FSM	ENSG00000111846.20	ENST00000475577.5	547	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	142.837903466365	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTACTCATGACTGAAGG	10521303	True	NA	NA	False	NA	NA	NA	10521350	10626616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_10521418_10527473_10527661_10621350_10621444_10626416
transcript_166739.known	chr6	+	4579	3	FSM	ENSG00000111846.20	ENST00000316170.9	4579	3	0	0	0	0	multi-exon	TRUE	canonical	3	133	junction_1	85.5	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGGGATACTGTGTATT	10553698	True	NA	14	True	AATAAA	-19	NA	10555808	10629368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_10557343_10621350_10621444_10626416
transcript_166740.known	chr6	+	4200	3	FSM	ENSG00000111846.20	ENST00000265012.5	4200	3	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_1	59	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGGGATACTGTGTATT	10582144	True	NA	14	True	AATAAA	-19	NA	10585759	10629368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_10586915_10621350_10621444_10626416
transcript_166741.known	chr6	+	4525	3	FSM	ENSG00000111846.20	ENST00000379597.7	4525	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	150.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCGGGGATACTGTGTAT	10528341	False	NA	13	True	AATAAA	-18	NA	10528355	10629367	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_10529837_10621350_10621444_10626416
transcript_166745.known	chr6	+	1523	10	FSM	ENSG00000111845.5	ENST00000379568.4	1523	10	0	0	0	0	multi-exon	FALSE	canonical	3	703	junction_1	66.3829146544854	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGGATGAAGGAGTCAT	10686696	True	NA	29	True	TATAAA	-23	NA	10694971	10709782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_10695070_10697323_10697487_10702368_10702490_10702564_10702640_10703404_10703458_10704506_10704653_10704746_10704845_10707414_10707515_10708952_10709077_10709237
transcript_166762.nnic	chr6	+	1393	9	NIC	ENSG00000111845.5	novel	1523	10	NA	NA	-33	0	combination_of_known_splicesites	FALSE	canonical	3	60	junction_1	264.158569802306	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGGATGAAGGAGTCAT	10686663	True	NA	29	True	TATAAA	-23	NA	10694938	10709782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_10695070_10702368_10702490_10702564_10702640_10703404_10703458_10704506_10704653_10704746_10704845_10707414_10707515_10708952_10709077_10709237
transcript_166764.nic	chr6	+	559	5	ISM	ENSG00000111845.5	ENST00000379568.4	1523	10	-49	6325	-49	-6325	5prime_fragment	FALSE	canonical	3	703	junction_1	61.6010348939042	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTATTTTTGTTTGAAA	10686647	True	NA	NA	False	TATAAA	-6	NA	10694922	10703457	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_10695070_10697323_10697487_10702368_10702490_10702564_10702640_10703404
transcript_166769.known	chr6	+	1016	6	FSM	ENSG00000111843.14	ENST00000229563.6	1016	6	0	0	0	0	multi-exon	FALSE	canonical	3	832	junction_1	97.5512173168536	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCCTATGGGGTCTTCA	10712726	True	NA	NA	False	AATAAA	-16	NA	10723069	10731127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_10723242_10724569_10724634_10724960_10725038_10725906_10726009_10728639_10728728_10730614
transcript_166771.nnic	chr6	+	921	5	NIC	ENSG00000111843.14	novel	1016	6	NA	NA	4	-3	combination_of_known_splicesites	FALSE	canonical	3	42	junction_4	420.754307761667	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATATTTCCTATGGGGTCT	10712730	True	NA	NA	False	AATAAA	-13	NA	10723073	10731124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_10723242_10724569_10724634_10724960_10725038_10725906_10726009_10730614
transcript_166773.known	chr6	+	899	5	FSM	ENSG00000111843.14	ENST00000467415.5	899	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	433.327459896093	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTATGGGGTCTTCATT	10712781	True	NA	NA	False	AATAAA	-18	NA	10723124	10731129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_10723242_10724960_10725038_10725906_10726009_10728639_10728728_10730614
transcript_166774.known	chr6	+	472	4	FSM	ENSG00000111843.14	ENST00000466421.5	472	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	473.738558935435	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGACATTTTACCTAAAAA	10712765	True	NA	NA	False	AATATA	-30	NA	10723108	10730763	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_10723242_10725906_10726009_10728639_10728728_10730614
transcript_166775.nnic	chr6	+	852	3	NIC	ENSG00000111843.14	novel	1016	6	NA	NA	76	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_1	511.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCCTATGGGGTCTTCA	10722968	False	NA	NA	False	AATAAA	-16	NA	10722990	10731127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_10723242_10728639_10728728_10730614
transcript_166781.known	chr6	+	929	6	FSM	ENSG00000137210.14	ENST00000379542.10	929	6	0	0	0	0	multi-exon	FALSE	canonical	3	747	junction_4	94.3071577347128	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTATGGTGTCTTCATT	10738114	True	NA	NA	False	AATAAA	-18	NA	10747804	10756981	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_10747882_10749201_10749269_10749621_10749699_10751132_10751235_10755141_10755233_10756466
transcript_166787.known	chr6	+	992	5	FSM	ENSG00000137210.14	ENST00000475942.5	992	5	0	0	0	0	multi-exon	FALSE	canonical	3	747	junction_4	100.924167076077	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGCGGTGGTGCACGCCT	10738114	True	NA	NA	False	AATACA	-11	NA	10747804	10755810	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_10747882_10749201_10749269_10749621_10749699_10751132_10751235_10755141
transcript_16679.known	chr1	+	1845	13	FSM	ENSG00000143228.13	ENST00000524800.5	1845	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	80.3089088042748	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTTTGAAATATATATATT	NA	False	NA	1	True	AGTAAA	-13	NA	163321899	163355727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_163322213_163326031_163326175_163327487_163327563_163328227_163328305_163328845_163328908_163336750_163336849_163338019_163338094_163339380_163339478_163340363_163340427_163343732_163343871_163347762_163347939_163348944_163349081_163355334
transcript_166793.known	chr6	+	787	5	FSM	ENSG00000137210.14	ENST00000379530.7	787	5	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_3	347.737329028679	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATCAATGAAAATAAAGTT	10738120	True	NA	NA	False	NA	NA	NA	10747810	10756947	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_10747882_10749201_10749269_10749621_10749699_10755141_10755233_10756466
transcript_166795.known	chr6	+	502	5	FSM	ENSG00000137210.14	ENST00000463100.5	502	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	440.504540271721	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTATGTGAATTAATAAAT	10738120	True	NA	-33	True	NA	NA	NA	10747810	10829165	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_10747882_10749201_10749269_10749621_10749699_10770076_10770205_10829006
transcript_166798.known	chr6	+	730	4	FSM	ENSG00000137210.14	ENST00000473276.5	730	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	378.465615640605	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATATTTCCTATGGTG	10738126	True	NA	NA	False	AATAAA	-10	NA	10747816	10756973	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_10747882_10749201_10749269_10755141_10755233_10756466
transcript_166802.known	chr6	+	2909	30	FSM	ENSG00000153157.13	ENST00000283141.11	2909	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	7.49030288683336	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATTGGATGTGTCTCTT	10886268	True	NA	117	True	AATAAA	-25	NA	10887051	10974309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_10887136_10891512_10891582_10893866_10894005_10894084_10894205_10898010_10898116_10898823_10898849_10902676_10902763_10902874_10902964_10906019_10906055_10907541_10907685_10910147_10910201_10910823_10910870_10912672_10912766_10912866_10912928_10924495_10924642_10926338_10926433_10927239_10927368_10928402_10928451_10930369_10930515_10931439_10931490_10935057_10935188_10942458_10942530_10942676_10942747_10955115_10955218_10956135_10956243_10958783_10958876_10961304_10961405_10961499_10961559_10963781_10963844_10973951
transcript_166809.known	chr6	-	3988	8	FSM	ENSG00000197977.4	ENST00000354666.4	3988	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	5.22943006220661	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTTGCGAGTTTTATT	-11044259	False	NA	NA	False	AATAAA	-18	NA	11044305	10980758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_10983907_10989702_10989838_10990317_10990443_10995006_10995179_11000086_11000165_11005371_11005560_11010745_11010810_11044227
transcript_166810.known	chr6	+	4887	2	FSM	ENSG00000224531.6	ENST00000416247.4	4887	2	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGTTATGTGTCTCTGG	11092653	True	NA	NA	False	AATAAA	-16	NA	11093833	11138733	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_11094390_11134402
transcript_166814.known	chr6	-	4522	7	FSM	ENSG00000111859.17	ENST00000379446.10	4522	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	6.04841577054135	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACTGGGTTTTCTTTTTC	-11230890	True	NA	-3	True	ATTAAA	-23	NA	11232668	11183297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_11185672_11188217_11188308_11189963_11191206_11192344_11192447_11193590_11193693_11213280_11213728_11232503
transcript_166817.nic	chr6	-	2118	6	ISM	ENSG00000111859.17	ENST00000379446.10	4522	7	-15	4965	-1	2595	5prime_fragment	FALSE	canonical	3	30	junction_4	3.48711915483254	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAATATCATGAAACAGAA	-11230905	True	NA	NA	False	NA	NA	NA	11232683	11188262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_11188308_11189963_11191206_11192344_11192447_11193590_11193693_11213280_11213728_11232503
transcript_166818.known	chr6	+	8891	3	FSM	ENSG00000205269.6	ENST00000379426.2	8891	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	12	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGTGTTTGACTCTTGGT	11537163	True	NA	NA	False	AATAAA	-20	NA	11537748	11583524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_11538375_11565665_11565837_11575430
transcript_166821.known	chr6	+	9053	9	FSM	ENSG00000095951.17	ENST00000379388.7	9053	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	9.34662372196506	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTGCTTCAGTTGTGCCT	12012119	True	NA	7	True	AGTAAA	-20	NA	12012311	12164999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_12012567_12015525_12015669_12089183_12089238_12119889_12125871_12129758_12129893_12130766_12130943_12135790_12135893_12161438_12161930_12163282
transcript_166822.known	chr6	+	585	4	FSM	ENSG00000095951.17	ENST00000487103.5	585	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	2.49443825784929	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCGTAGATGGAGATCCGAA	12011552	True	NA	NA	False	NA	NA	NA	12011999	12120222	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_12012055_12015525_12015669_12089183_12089238_12119889
transcript_166826.known	chr6	+	576	4	FSM	ENSG00000095951.17	ENST00000478545.1	576	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3.39934634239519	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCCCAAAGAAGCCCTTG	12012637	True	NA	NA	False	NA	NA	NA	12012701	12120180	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_12012790_12015525_12015669_12089183_12089238_12119889
transcript_166827.known	chr6	+	2035	5	FSM	ENSG00000078401.7	ENST00000379375.6	2035	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	1.08972473588517	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATTTGGAATCATTACTG	12290285	True	NA	8	True	AATAAA	-20	NA	12290360	12297194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_12290694_12292340_12292510_12293940_12294097_12294260_12294405_12295961
transcript_166828.known	chr6	+	615	1	FSM	ENSG00000212802.4	ENST00000391491.2	615	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4636	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAGTAAAGTCTGTAAAA	12512043	True	NA	NA	False	NA	NA	NA	12514109	12514724	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_12514100_12514700
transcript_166834.nic	chr6	-	1322	8	NIC	ENSG00000145979.18	novel	1282	8	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	234.084757020588	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-13323133	True	NA	0	True	AATAAA	-16	NA	13328573	13304950	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_13305188_13306397_13306528_13307595_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326907_13328295
transcript_166835.nic	chr6	-	1287	8	NIC	ENSG00000145979.18	novel	1282	8	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	230.436763648547	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-13323118	True	NA	0	True	AATAAA	-16	NA	13328558	13304950	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_13305188_13306397_13306528_13307595_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326907_13328315
transcript_166836.nic	chr6	-	1151	8	NIC	ENSG00000145979.18	novel	1116	8	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	218.79456397381	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-13323122	True	NA	0	True	AATAAA	-16	NA	13328562	13304950	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_13305188_13306397_13306528_13307595_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326907_13328455
transcript_166837.nic	chr6	-	1356	8	NIC	ENSG00000145979.18	novel	1282	8	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	255.805570298847	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-13323110	True	NA	0	True	AATAAA	-16	NA	13328550	13304950	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_13305188_13306397_13306528_13307595_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326964_13328295
transcript_166838.nnic	chr6	-	1355	8	NIC	ENSG00000145979.18	novel	1282	8	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	247.841786267789	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-13323129	True	NA	0	True	AATAAA	-16	NA	13328569	13304950	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_13305188_13306397_13306528_13307595_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326964_13328315
transcript_166839.nic	chr6	-	1208	8	NIC	ENSG00000145979.18	novel	1116	8	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	251.767385351103	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-13323122	True	NA	0	True	AATAAA	-16	NA	13328562	13304950	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_13305188_13306397_13306528_13307595_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326964_13328455
transcript_166843.nic	chr6	-	1241	7	NIC	ENSG00000145979.18	novel	1282	8	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	256.301038277691	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-13323133	True	NA	0	True	AATAAA	-16	NA	13328573	13304950	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_13305188_13306397_13306528_13307595_13307746_13316570_13316709_13320907_13321096_13326786_13326907_13328295
transcript_166844.nic	chr6	-	1206	7	NIC	ENSG00000145979.18	novel	1282	8	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	253.487288745522	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-13323118	True	NA	0	True	AATAAA	-16	NA	13328558	13304950	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_13305188_13306397_13306528_13307595_13307746_13316570_13316709_13320907_13321096_13326786_13326907_13328315
transcript_166845.known	chr6	-	1084	7	FSM	ENSG00000145979.18	ENST00000379307.6	1084	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	245.633025738261	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCCTGGTGTTGCTGTG	-13323143	False	NA	-3	True	AATAAA	-13	NA	13328583	13304953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_13305188_13306397_13306528_13307599_13307746_13316570_13316709_13320907_13321096_13326786_13326907_13328455
transcript_166851.known	chr6	-	1027	7	FSM	ENSG00000145979.18	ENST00000343141.8	1027	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	253.13237643573	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCCTGGTGTTGCTGTG	-13323143	False	NA	-3	True	AATAAA	-13	NA	13328583	13304953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_13305188_13306397_13306528_13307599_13307746_13320907_13321096_13325093_13325175_13326786_13326907_13328455
transcript_166864.known	chr6	-	693	5	FSM	ENSG00000145979.18	ENST00000379291.5	693	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	234.576613284445	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTGTTTCTTGCCATAG	-13323091	True	NA	NA	False	NA	NA	NA	13328531	13316697	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_13316709_13320907_13321096_13325093_13325175_13326786_13326964_13328295
transcript_16688.known	chr1	+	779	4	FSM	ENSG00000143228.13	ENST00000487578.2	779	4	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	56.5685424949238	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGTTTGAGTTCTTAAAA	163317377	True	NA	NA	False	NA	NA	NA	163321985	163328561	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_163322213_163326031_163326175_163327487_163327563_163328227
transcript_166884.known	chr6	-	1116	8	FSM	ENSG00000145979.18	ENST00000356436.8	1116	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	219.376388884492	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-13323091	True	NA	0	True	AATAAA	-16	NA	13328531	13304950	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_13305188_13306397_13306528_13307599_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326907_13328455
transcript_166885.known	chr6	-	1282	8	FSM	ENSG00000145979.18	ENST00000379300.8	1282	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	234.611793986473	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-13323097	True	NA	0	True	AATAAA	-16	NA	13328537	13304950	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_13305188_13306397_13306528_13307599_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326907_13328295
transcript_166886.known	chr6	-	8796	2	FSM	ENSG00000145990.11	ENST00000379287.4	8796	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGCTCTTTGCCTGTTT	-13486906	True	NA	NA	False	AATAAA	-20	NA	13487600	13357829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_13365663_13486637
transcript_166887.known	chr6	-	2388	2	FSM	ENSG00000145990.11	ENST00000603223.1	2388	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGAGTGTGATGTATTCCT	-13487646	True	NA	NA	False	AATAAA	-32	NA	13487662	13469267	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_13470631_13486637
transcript_166890.known	chr6	+	3900	10	FSM	ENSG00000124523.17	ENST00000680432.1	3900	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	57.9184185719581	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTATGTGTATATACCA	NA	False	NA	NA	False	AATAAA	-18	NA	13574226	13614558	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_13574307_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13599031_13599156_13600833_13600950_13611789
transcript_166895.known	chr6	+	2339	10	FSM	ENSG00000124523.17	ENST00000379262.8	2339	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	62.1880858741557	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTGTTTTGACTGTTA	13572682	True	NA	27	True	AATAAA	-24	NA	13574600	13605739	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_13574625_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13599031_13599156_13600833_13600950_13604475
transcript_166898.nic	chr6	+	1516	10	NIC	ENSG00000124523.17	novel	4659	10	NA	NA	15	-114	combination_of_known_junctions	FALSE	canonical	3	122	junction_1	30.134677125068	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTATTCTGATTATATTT	13574525	False	NA	2	True	NA	NA	NA	13574543	13612173	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_13574625_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13599031_13599156_13600833_13600950_13611789
transcript_166899.nic	chr6	+	1630	10	NIC	ENSG00000124523.17	novel	4659	10	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	122	junction_1	30.134677125068	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGTAATTTATTGTATAAA	13574525	False	NA	3	True	AATAAA	-15	NA	13574543	13612287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_13574625_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13599031_13599156_13600833_13600950_13611789
transcript_166901.known	chr6	+	3401	9	FSM	ENSG00000124523.17	ENST00000680852.1	3401	9	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	30.8684203515502	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCCAGACTCCGTCTCAA	13572665	True	NA	NA	False	NA	NA	NA	13574583	13603258	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_13574625_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13599031_13599156_13600833
transcript_166903.known	chr6	+	3727	9	FSM	ENSG00000124523.17	ENST00000379250.10	3727	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	61.8405206963848	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTATGTGTATATACCA	13572665	True	NA	NA	False	AATAAA	-18	NA	13574583	13614558	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_13574625_13579450_13579610_13584075_13584226_13591668_13591895_13595476_13595565_13596962_13597017_13599031_13599156_13600833_13600950_13611789
transcript_166906.known	chr6	-	1045	1	FSM	ENSG00000261071.1	ENST00000566170.1	1045	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATCTTACACATATATT	-13614987	True	NA	-13	True	AATAAA	-16	NA	13615155	13614110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_13614100_13615200
transcript_166909.known	chr6	+	1683	8	FSM	ENSG00000225921.7	ENST00000451315.7	1683	8	0	0	0	0	multi-exon	FALSE	canonical	3	1659	junction_7	116.960834191168	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAGAAGTCATCTGTAGT	13583553	True	NA	64	True	AATACA	-22	NA	13615334	13621712	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_13615625_13615711_13615773_13616462_13616522_13617769_13617802_13618057_13618140_13620207_13620330_13620407_13620486_13620753
transcript_166911.nic	chr6	+	800	7	ISM	ENSG00000225921.7	ENST00000451315.7	1683	8	-75	1226	-75	-1226	5prime_fragment	FALSE	canonical	3	1676	junction_4	109.686548349781	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATCCAGCTTTATTCTC	NA	False	NA	NA	False	NA	NA	NA	13615259	13620486	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_13615625_13615711_13615773_13616462_13616522_13617769_13617802_13618057_13618140_13620207_13620330_13620407
transcript_166917.known	chr6	+	646	4	FSM	ENSG00000225921.7	ENST00000420088.1	646	4	0	0	0	0	multi-exon	FALSE	canonical	3	1792	junction_3	93.5960587964163	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTTTATTTTATTTTA	13615480	False	NA	NA	False	NA	NA	NA	13615546	13618217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_13615625_13615711_13615773_13616462_13616522_13617769
transcript_16692.known	chr1	+	7087	9	FSM	ENSG00000185630.19	ENST00000420696.7	7087	9	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_6	25.1964159157607	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTATTTTGTGCACATT	164559098	False	NA	18	True	AATAAA	-27	NA	164559183	164851831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_164560014_164563237_164563312_164792493_164792739_164799698_164799890_164807541_164807678_164811989_164812150_164820071_164820185_164821536_164821627_164846583
transcript_166928.known	chr6	-	5471	9	FSM	ENSG00000050393.12	ENST00000379170.9	5460	9	-11	0	0	0	multi-exon	FALSE	canonical	3	391	junction_1	33.7305499510459	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTAACTTTTCATCATT	-13814522	False	NA	-5	True	AATAAA	-16	NA	13814568	13786556	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_13790865_13791877_13791993_13793893_13793948_13798832_13798905_13800340_13800383_13801287_13801390_13802242_13802347_13806924_13807045_13814014
transcript_166937.nic	chr6	-	859	4	ISM	ENSG00000050393.12	ENST00000379170.9	5460	9	6	14735	6	-10504	5prime_fragment	FALSE	canonical	3	412	junction_1	31.0161248385416	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGGTAAAACAGAGCCTCT	-13813414	True	NA	3	True	NA	NA	NA	13814551	13801291	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_13801390_13802242_13802347_13806924_13807045_13814014
transcript_166938.known	chr6	+	3629	3	FSM	ENSG00000180537.13	ENST00000488300.6	3629	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	3	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCGGTTTTAGTTTGTT	13924332	True	NA	NA	False	AATAAA	-22	NA	13924951	13980310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_13925024_13974209_13974365_13976908
transcript_166939.known	chr6	+	2328	5	FSM	ENSG00000112149.10	ENST00000379153.4	2328	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_4	11.6270159542335	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGTTGTAAACCAGTTTG	14116343	True	NA	NA	False	AATAAA	-45	NA	14117771	14136906	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_14117849_14117949_14118066_14131519_14131749_14133648_14133756_14135107
transcript_166956.nnic	chr6	-	1373	3	NNC	ENSG00000234261.5	novel	1915	5	NA	NA	-59	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_1	3.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACTCGGTGTCTGAGGGG	-15020717	True	NA	-4	True	AATAAA	-13	NA	15022023	14976212	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_14977319_14997415_14997476_15021816
transcript_166968.known	chr6	+	6003	18	FSM	ENSG00000008083.14	ENST00000341776.7	6003	18	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_2	133.769827621953	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGACTGAATGGAATGAGC	15213354	True	NA	35	True	AATAAA	-37	NA	15246068	15522042	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_15246585_15374116_15374253_15410223_15410366_15452005_15452176_15468541_15468719_15487306_15487543_15496131_15497171_15500906_15501410_15504499_15504593_15507135_15507255_15507345_15507417_15508339_15508455_15511295_15511402_15512207_15512391_15512914_15513046_15513238_15513423_15517160_15517269_15520068
transcript_166974.known	chr6	+	5595	18	FSM	ENSG00000008083.14	ENST00000397311.4	5595	18	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	172.253876368213	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATGACTGAATGGAATGA	15248537	True	NA	33	True	AATAAA	-35	NA	15248854	15522040	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_15248965_15374116_15374253_15410223_15410366_15452005_15452176_15468541_15468719_15487306_15487543_15496131_15497171_15500906_15501410_15504499_15504593_15507135_15507255_15507345_15507417_15508339_15508455_15511295_15511402_15512207_15512391_15512914_15513046_15513238_15513423_15517160_15517269_15520068
transcript_166979.nnic	chr6	+	5019	17	NIC	ENSG00000008083.14	novel	6003	18	NA	NA	-99	-939	combination_of_known_splicesites	FALSE	canonical	3	76	junction_2	159.179328412172	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATGGAAGCCGTAAGTGC	15245934	False	NA	53	True	AAAAAG	-10	NA	15245969	15521101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_15246585_15374116_15374253_15452005_15452176_15468541_15468719_15487306_15487543_15496131_15497171_15500906_15501410_15504499_15504593_15507135_15507255_15507345_15507417_15508339_15508455_15511295_15511402_15512207_15512391_15512914_15513046_15513238_15513423_15517160_15517269_15520068
transcript_166990.nic	chr6	+	4441	15	ISM	ENSG00000008083.14	ENST00000341776.7	6003	18	-749	9042	-749	4607	5prime_fragment	TRUE	canonical	3	288	junction_2	112.800189064829	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTCCCACTCTCAGTACCA	15245306	True	NA	43	True	AAAAAG	-5	NA	15245319	15513000	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_15246585_15374116_15374253_15410223_15410366_15452005_15452176_15468541_15468719_15487306_15487543_15496131_15497171_15500906_15501410_15504499_15504593_15507135_15507255_15507345_15507417_15508339_15508455_15511295_15511402_15512207_15512391_15512914
transcript_16700.known	chr1	+	680	7	FSM	ENSG00000143198.13	ENST00000367885.5	680	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	768.979283783958	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTGACTCTTACCACTCA	165610113	True	NA	35	True	AATAAA	-32	NA	165631239	165655620	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_165631294_165632230_165632275_165649840_165649965_165651013_165651088_165651977_165652036_165654278_165654352_165655367
transcript_167007.known	chr6	-	1518	11	FSM	ENSG00000047579.20	ENST00000513680.5	1518	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	84.5364418461056	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAACAGCTAACAATAAA	-15661731	True	NA	-41	True	NA	NA	NA	15663058	15522842	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_15523220_15524525_15524668_15533235_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15651312_15651364_15652086_15652141_15660382_15660522_15662813
transcript_167008.nnic	chr6	-	1459	10	NIC	ENSG00000047579.20	novel	1383	10	NA	NA	-42	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	61.0684699717568	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGAGCGCACAGAGCTAG	NA	False	NA	-5	True	AATAAA	-17	NA	15663100	15522806	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_15523220_15524525_15524670_15533235_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15651312_15651364_15652086_15652141_15662813
transcript_16701.known	chr1	+	706	7	FSM	ENSG00000143198.13	ENST00000367883.3	706	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	768.979283783958	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTGACTCTTACCACTCA	165610936	False	NA	35	True	AATAAA	-32	NA	165632062	165655620	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_165632143_165632230_165632275_165649840_165649965_165651013_165651088_165651977_165652036_165654278_165654352_165655367
transcript_167012.nic	chr6	-	713	6	ISM	ENSG00000047579.20	ENST00000338950.9	1880	9	-125	91710	-42	-90733	5prime_fragment	FALSE	canonical	3	167	junction_1	21.35790251874	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAGGTGAGTTTGAAAAG	NA	False	NA	NA	False	AAGAAA	-3	NA	15663100	15615272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_15615400_15627342_15627476_15637743_15637805_15651312_15651364_15652086_15652141_15662813
transcript_167014.known	chr6	-	1383	10	FSM	ENSG00000047579.20	ENST00000344537.10	1383	10	0	0	0	0	multi-exon	TRUE	canonical	1	55	junction_2	44.7735040695573	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGAGCGCACAGAGCTAG	-15661701	True	NA	-5	True	AATAAA	-17	NA	15663028	15522806	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_15523220_15524525_15524670_15533239_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15651312_15651364_15652086_15652141_15662813
transcript_167015.known	chr6	-	1880	9	FSM	ENSG00000047579.20	ENST00000338950.9	1880	9	0	0	0	0	multi-exon	FALSE	canonical	1	55	junction_1	47.4616621601056	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATCTAGATTATCAAGGT	-15661648	True	NA	NA	False	NA	NA	NA	15662975	15523562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_15524670_15533239_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15651312_15651364_15652086_15652141_15662813
transcript_167018.known	chr6	+	3072	7	FSM	ENSG00000007944.15	ENST00000356840.8	3072	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	49.5098194525311	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGATGTGTGTATTGTCA	16126077	True	NA	15	True	AATAAA	-15	NA	16129085	16148248	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_16129410_16130556_16130748_16141624_16141811_16143019_16143218_16143698_16143864_16144896_16145318_16146661
transcript_167020.nic	chr6	+	3062	6	ISM	ENSG00000007944.15	ENST00000356840.8	3072	7	-3	1357	-3	-1357	intron_retention	FALSE	canonical	0	0	junction_5	50.8196812268633	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACACAGCTACTCCTCACT	16126074	True	NA	NA	False	AAAAAG	-10	NA	16129082	16146891	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_16129410_16130556_16130748_16141624_16141811_16143019_16143218_16143698_16143864_16144896
transcript_167023.known	chr6	+	2796	6	FSM	ENSG00000007944.15	ENST00000349606.4	2796	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	60.7302231183124	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGATGTGTGTATTGTCA	16126162	False	NA	15	True	AATAAA	-15	NA	16129170	16148248	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_16129410_16141624_16141811_16143019_16143218_16143698_16143864_16144896_16145318_16146661
transcript_167024.nnic	chr6	+	2916	5	NIC	ENSG00000007944.15	novel	3072	7	NA	NA	-22	-1357	intron_retention	FALSE	canonical	3	19	junction_4	46.9946805500367	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACACAGCTACTCCTCACT	16126055	True	NA	NA	False	AAAAAG	-10	NA	16129063	16146891	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_16129410_16130556_16130748_16141624_16141811_16143019_16143218_16144896
transcript_167026.nic	chr6	+	823	2	ISM	ENSG00000007944.15	ENST00000356840.8	3072	7	-3	17196	-3	-17196	5prime_fragment	FALSE	canonical	3	125	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCCTACCCGAGTGACTG	16126074	True	NA	NA	False	AAAAAG	-4	NA	16129082	16131052	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_16129410_16130556
transcript_167028.known	chr6	+	1508	9	FSM	ENSG00000137198.10	ENST00000259727.5	1508	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	3.80583433690958	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTTGCTGGAGTTTGTA	16238507	True	NA	11	True	AATATA	-23	NA	16238586	16295549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_16238781_16246841_16246962_16250283_16250368_16254561_16254736_16274414_16274497_16278783_16278891_16285792_16285836_16290461_16290622_16295005
transcript_167029.known	chr6	-	3362	3	FSM	ENSG00000124788.19	ENST00000467008.5	3362	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTATGTCTCTTGATTTT	-16761194	True	NA	NA	False	ACTAAA	-25	NA	16761476	16736850	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_16739919_16753232_16753348_16761297
transcript_16703.known	chr1	+	1158	6	FSM	ENSG00000143198.13	ENST00000367889.8	1158	6	0	0	0	0	multi-exon	FALSE	canonical	3	1205	junction_1	181.666287461378	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTTCTGTTGCTTAAA	165610107	True	NA	NA	False	AATAAA	-23	NA	165631233	165656136	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_165631294_165649840_165649965_165651013_165651088_165651977_165652036_165654278_165654352_165655367
transcript_167030.known	chr6	-	568	2	FSM	ENSG00000124788.19	ENST00000479680.1	568	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCATCATTTTAATTGTCA	-16761197	True	NA	NA	False	GGGGCT	-5	NA	16761479	16752961	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_16753348_16761297
transcript_167031.known	chr6	+	635	2	FSM	ENSG00000229931.2	ENST00000450930.2	1032	2	0	397	0	-34	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAATCTTCTTCGGATGG	16761898	False	NA	NA	False	NA	NA	NA	16761911	16762618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_16762280_16762351
transcript_167035.known	chr6	+	2925	13	FSM	ENSG00000112186.13	ENST00000229922.7	2925	13	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_10	12.4105130165249	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTGATGAATTCTGGAT	17391304	True	NA	13	True	AATAAA	-22	NA	17393594	17557780	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_17393747_17421554_17421677_17426589_17426691_17462995_17463074_17507168_17507313_17507640_17507727_17513848_17513955_17539268_17539459_17540972_17541149_17542836_17542961_17543060_17543144_17551463_17551605_17556358
transcript_167043.known	chr6	+	1812	12	FSM	ENSG00000112186.13	ENST00000378990.6	1812	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	24.0766681750865	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATAAAACCTTTGAG	17391354	True	NA	NA	False	AAAAAG	-41	NA	17393644	17556795	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_17393747_17421554_17421677_17426589_17426691_17507168_17507313_17507640_17507727_17513848_17513955_17539268_17539459_17540972_17541149_17542836_17542961_17543060_17543144_17551463_17551605_17556358
transcript_167046.known	chr6	+	1404	11	FSM	ENSG00000112186.13	ENST00000465994.5	1404	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	25.1507455157894	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGATACAGCACTGTTTC	17391421	True	NA	NA	False	NA	NA	NA	17393711	17556568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_17393747_17421554_17421677_17426589_17426691_17462995_17463074_17507168_17507313_17539268_17539459_17540972_17541149_17542836_17542961_17543060_17543144_17551463_17551605_17556358
transcript_16705.known	chr1	+	720	6	FSM	ENSG00000143198.13	ENST00000495447.5	720	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	656.559700255811	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCCTGACTCTTACCAC	165610112	True	NA	32	True	AATAAA	-29	NA	165631238	165655617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_165631294_165649754_165649965_165651013_165651088_165651977_165652036_165654278_165654352_165655367
transcript_167050.known	chr6	+	1430	10	FSM	ENSG00000112186.13	ENST00000489374.5	1430	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	28.8037206101513	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACATGATGACTTGTGAAC	17391342	True	NA	-25	True	NA	NA	NA	17393632	17556659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_17393747_17421554_17421677_17426589_17426691_17462995_17463074_17539268_17539459_17540972_17541149_17542836_17542961_17543060_17543144_17551463_17551605_17556358
transcript_167056.nic	chr6	+	629	4	ISM	ENSG00000112186.13	ENST00000476263.1	891	9	-68	75972	1	-75972	5prime_fragment	FALSE	canonical	3	85	junction_1	4.49691252107735	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTGTCTTCTTACTAC	17391373	True	NA	NA	False	AAAAAG	-12	NA	17393663	17463318	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_17393747_17421554_17421677_17426589_17426691_17462995
transcript_167059.known	chr6	+	4726	5	FSM	ENSG00000137414.7	ENST00000259963.4	4726	5	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	5.1720402163943	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATCTGTATTTTGTCTAT	17598818	True	NA	13	True	AATAAA	-15	NA	17600301	17611715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_17601122_17602589_17602711_17604905_17605030_17605873_17606014_17608194
transcript_167065.known	chr6	-	6026	22	FSM	ENSG00000124789.12	ENST00000262077.3	6026	22	0	0	0	0	multi-exon	TRUE	canonical	3	229	junction_14	38.8786705072095	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGTTCTAGTTTTACC	-17701734	True	NA	-11	True	AATAAA	-14	NA	17706925	17615036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_17616182_17616526_17616696_17624560_17624834_17625807_17626165_17628654_17629540_17632649_17632845_17637152_17637771_17639938_17640065_17646066_17646155_17647806_17647906_17649162_17649301_17661652_17661780_17662017_17662071_17665238_17665386_17668974_17669029_17669292_17669338_17669429_17669547_17674904_17675034_17675228_17675369_17675521_17675771_17688395_17688619_17706276
transcript_167068.nnic	chr6	-	5985	21	NIC	ENSG00000124789.12	novel	6026	22	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_14	70.1698653269336	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGTTCTAGTTTTACC	-17706910	False	NA	-11	True	AATAAA	-14	NA	17706938	17615036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_17616182_17616526_17616696_17624560_17624834_17625807_17626165_17628654_17629540_17632649_17632845_17637152_17637771_17639938_17640065_17646066_17646155_17647806_17647906_17649162_17649301_17661652_17661780_17662017_17662071_17665238_17665386_17669292_17669338_17669429_17669547_17674904_17675034_17675228_17675369_17675521_17675771_17688395_17688619_17706276
transcript_167075.known	chr6	+	1088	1	FSM	ENSG00000272269.1	ENST00000606771.1	1088	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACGGCTTCATTAATGTT	17706197	False	NA	NA	False	AATAAA	-28	NA	17706256	17707344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_17706300_17707300
transcript_167076.known	chr6	-	2238	1	FSM	ENSG00000187566.6	ENST00000340650.6	2238	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTTGTTTGAGAAAGGC	-18122531	True	NA	35	True	NA	NA	NA	18122677	18120439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_18120400_18122700
transcript_167077.nnic	chr6	-	1815	10	NNC	ENSG00000137364.5	novel	3184	9	NA	NA	-81	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	104.139981767183	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTTGTTTCATTTTAT	-18148390	True	NA	0	True	ATTAAA	-24	NA	18155158	18128310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_18128802_18130251_18130781_18132132_18132178_18133803_18133890_18138962_18139038_18139664_18139718_18143595_18143729_18147822_18147916_18148987_18149172_18155032
transcript_167086.known	chr6	-	3184	9	FSM	ENSG00000137364.5	ENST00000309983.5	3184	9	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_8	32.4489984437116	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTTGTTTCATTTTAT	-18148309	True	NA	0	True	ATTAAA	-24	NA	18155077	18128310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_18130781_18132132_18132178_18133803_18133890_18138962_18139038_18139664_18139718_18143595_18143729_18147822_18147916_18148987_18149172_18155032
transcript_16709.known	chr1	+	741	3	FSM	ENSG00000143198.13	ENST00000488688.1	741	3	0	0	0	0	multi-exon	FALSE	canonical	3	1205	junction_1	217	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAGATGTAAAGATTCAT	165610131	True	NA	NA	False	NA	NA	NA	165631257	165651594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_165631294_165649840_165649965_165651013
transcript_167096.known	chr6	+	4538	22	FSM	ENSG00000165097.16	ENST00000650836.2	4538	22	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_21	7.59430506285829	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTACTGTAGTGGTGAT	18154129	True	NA	18	True	AATAAA	-21	NA	18155421	18223854	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_18155572_18155882_18155927_18159882_18159983_18161326_18161455_18162834_18162925_18166266_18166379_18171362_18171480_18185771_18185811_18187791_18188003_18191196_18191382_18197056_18197234_18197586_18197662_18200438_18200577_18201485_18201658_18205536_18205665_18207397_18207530_18208131_18208207_18212487_18212605_18213655_18213782_18215006_18215130_18217732_18217886_18221908
transcript_16710.known	chr1	+	1002	2	FSM	ENSG00000143198.13	ENST00000461308.1	1002	2	0	0	0	0	multi-exon	FALSE	canonical	3	1205	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGCAACTACAGCGCAG	165610099	True	NA	NA	False	AATGAA	-35	NA	165631225	165650774	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_165631294_165649840
transcript_16711.known	chr1	+	716	7	FSM	ENSG00000143198.13	ENST00000367884.6	716	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	774.582772996032	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTGACTCTTACCACTCA	165610128	True	NA	35	True	AATAAA	-32	NA	165631254	165655620	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_165631293_165635726_165635823_165649840_165649965_165651013_165651088_165651977_165652036_165654278_165654352_165655367
transcript_167110.known	chr6	-	2895	12	FSM	ENSG00000124795.17	ENST00000515770.2	2895	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	723.440265800721	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTATAAACCTTGTCAATAA	-18232413	True	NA	-62	True	ACTAAA	-40	NA	18264548	18224216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_18225731_18226173_18226243_18236451_18236597_18237380_18237517_18244507_18244604_18249650_18249840_18255730_18255852_18256360_18256456_18257952_18258063_18258303_18258406_18263842_18263997_18264384
transcript_167115.known	chr6	-	1360	11	FSM	ENSG00000124795.17	ENST00000652576.1	1360	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	504.873092964955	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCATTATACCAGCAAAGAG	-18264207	False	NA	NA	False	NA	NA	NA	18264267	18225665	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_18225731_18226173_18226243_18236451_18236601_18237380_18237517_18249650_18249840_18255730_18255852_18256360_18256456_18257952_18258063_18258303_18258406_18263842_18263997_18264097
transcript_167116.known	chr6	-	3142	11	FSM	ENSG00000124795.17	ENST00000652689.1	3142	11	0	0	0	0	multi-exon	FALSE	canonical	3	1421	junction_10	101.068541099592	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTACATGTGAAAGTCT	-18232395	True	NA	-5	True	ATTAAA	-23	NA	18264530	18223859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_18225731_18226173_18226243_18236451_18236601_18237380_18237517_18249650_18249840_18255730_18255852_18256360_18256456_18257952_18258063_18258303_18258406_18263842_18263997_18264384
transcript_167120.known	chr6	-	3093	10	FSM	ENSG00000124795.17	ENST00000507591.2	3093	10	0	0	0	0	multi-exon	FALSE	canonical	3	1421	junction_9	105.959111610721	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTAACAGGTATTTTCACA	-18232389	True	NA	82	True	TATAAA	-14	NA	18264524	18224345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_18226243_18236451_18236601_18237380_18237517_18249650_18249840_18255730_18255852_18256360_18256456_18257952_18258063_18258303_18258406_18263842_18263997_18264384
transcript_167124.nic	chr6	-	1086	8	ISM	ENSG00000124795.17	ENST00000507591.2	3093	10	-40	13036	-16	-332	5prime_fragment	FALSE	canonical	3	1421	junction_7	106.717823617009	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTATGTTAGAAATAACATT	-18232429	True	NA	5	True	AAAACA	-12	NA	18264564	18237381	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_18237517_18249650_18249840_18255730_18255852_18256360_18256456_18257952_18258063_18258303_18258406_18263842_18263997_18264384
transcript_167125.nic	chr6	-	976	8	ISM	ENSG00000124795.17	ENST00000507591.2	3093	10	-35	13141	-11	-437	5prime_fragment	FALSE	canonical	3	1421	junction_7	106.717823617009	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAAACAGAAAGCTACTTC	-18232424	True	NA	-100	True	AAAAAG	-19	NA	18264559	18237486	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_18237517_18249650_18249840_18255730_18255852_18256360_18256456_18257952_18258063_18258303_18258406_18263842_18263997_18264384
transcript_167127.nic	chr6	-	1130	7	ISM	ENSG00000124795.17	ENST00000507591.2	3093	10	-265	25351	-241	6039	5prime_fragment	FALSE	canonical	3	1421	junction_6	112.951931762537	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGAAGAGTCTTCAGATG	-18264729	False	NA	14	True	AAGAAA	-3	NA	18264789	18249696	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_18249840_18255730_18255852_18256360_18256456_18257952_18258063_18258303_18258406_18263842_18263997_18264384
transcript_167133.nic	chr6	-	765	6	ISM	ENSG00000124795.17	ENST00000507591.2	3093	10	-48	31390	-24	0	5prime_fragment	FALSE	canonical	3	1421	junction_5	91.8781802170679	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAGTGAGGATCAATTTT	-18264512	False	NA	NA	False	NA	NA	NA	18264572	18255735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_18255852_18256360_18256456_18257952_18258063_18258303_18258406_18263842_18263997_18264384
transcript_167135.nic	chr6	-	845	5	ISM	ENSG00000124795.17	ENST00000507591.2	3093	10	-265	32036	-241	144	5prime_fragment	FALSE	canonical	3	1421	junction_4	101.689478315114	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGGAAGAAATGTTGAAAA	-18264729	False	NA	-22	True	TATAAA	-3	NA	18264789	18256381	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_18256456_18257952_18258063_18258303_18258406_18263842_18263997_18264384
transcript_167137.known	chr6	-	1906	4	FSM	ENSG00000124795.17	ENST00000515742.2	1906	4	0	0	0	0	multi-exon	FALSE	canonical	3	1421	junction_3	103.743272874277	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTTTGAATTTATTCTT	-18232362	True	NA	-121	True	AATAAA	-16	NA	18264497	18256525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_18258063_18258303_18258406_18263842_18263997_18264384
transcript_167139.nic	chr6	-	383	3	ISM	ENSG00000124795.17	ENST00000515742.2	1906	4	-75	1839	-24	-1839	5prime_fragment	FALSE	canonical	3	1421	junction_2	124	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGAGAGGTTGACAATGCA	-18264512	False	NA	14	True	AAGAAA	-4	NA	18264572	18258364	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_18258406_18263842_18263997_18264384
transcript_16714.known	chr1	-	2696	11	FSM	ENSG00000143149.13	ENST00000354775.5	2395	11	-301	0	-301	0	multi-exon	FALSE	canonical	3	334	junction_10	39.8232344241399	364	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTATCGTGTTTTGAAAC	NA	False	NA	-5	True	AATAAA	-18	NA	165698863	165662215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_165663145_165665017_165665131_165667308_165667451_165668925_165669014_165669261_165669451_165679441_165679583_165680486_165680684_165682106_165682242_165682980_165683111_165695251_165695398_165698377
transcript_167140.nic	chr6	-	341	2	ISM	ENSG00000124795.17	ENST00000515742.2	1906	4	-75	7318	-24	-7318	5prime_fragment	FALSE	canonical	3	1421	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGGGGAGTCGCATCCC	-18264512	False	NA	4	True	NA	NA	NA	18264572	18263843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_18263997_18264384
transcript_167141.known	chr6	-	2851	10	FSM	ENSG00000124795.17	ENST00000651992.1	2851	10	0	0	0	0	multi-exon	FALSE	canonical	3	1568	junction_4	72.7513947089591	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTATAAACCTTGTCAATAA	-18264148	False	32135	-62	True	ACTAAA	-40	NA	18264208	18224216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_18225731_18226173_18226243_18236451_18236601_18237380_18237517_18249650_18249840_18255730_18255852_18256360_18256456_18257952_18258063_18258303_18258406_18263842
transcript_167142.known	chr6	+	5032	8	FSM	ENSG00000137393.10	ENST00000259939.4	5032	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	4.4629998148038	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTGTGTTAACCTTTGT	18386833	True	NA	NA	False	AATAAA	-14	NA	18387349	18468870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_18387631_18399498_18399700_18427580_18427686_18439683_18439745_18457154_18457360_18459606_18459752_18463290_18463381_18464926
transcript_167146.known	chr6	+	3873	3	FSM	ENSG00000172201.12	ENST00000378700.8	3873	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	9.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGGAGTTTGTGGTTT	19835840	True	NA	6	True	AATAAA	-17	NA	19837369	19842197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_19838196_19838583_19838643_19839209
transcript_167149.known	chr6	-	4325	13	FSM	ENSG00000172197.11	ENST00000324607.8	4325	13	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_7	7.56224173112709	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCAGTTGTTTTTTTTT	-20211350	True	NA	0	True	AATAAA	-42	NA	20212469	20099683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_20102413_20109597_20109750_20112875_20113009_20115287_20115353_20118436_20118541_20124407_20124601_20126516_20126701_20128698_20128754_20131143_20131200_20144219_20144316_20151184_20151263_20152623_20152770_20212135
transcript_167158.nnic	chr6	+	3281	7	NNC	ENSG00000112242.16	novel	5036	7	NA	NA	-42	-1542	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.7266974854512	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAAGAGCCCCAGCCAGT	20397865	True	NA	NA	False	AAAACA	-10	NA	20401836	20492172	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_20402371_20479845_20479958_20481205_20481426_20482761_20482921_20486688_20486804_20488112_20488249_20490167
transcript_167160.nnic	chr6	+	4823	7	NNC	ENSG00000112242.16	novel	5036	7	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.7266974854512	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTGTGGATGGGTTTT	20397865	True	NA	9	True	AATAAA	-45	NA	20401836	20493714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_20402371_20479845_20479958_20481205_20481426_20482761_20482921_20486688_20486804_20488112_20488249_20490167
transcript_167161.known	chr6	+	5036	7	FSM	ENSG00000112242.16	ENST00000346618.8	5036	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	24.1108550933668	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTGTGGATGGGTTTT	20397907	True	NA	9	True	AATAAA	-45	NA	20401878	20493714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_20402626_20479845_20479958_20481205_20481426_20482761_20482921_20486688_20486804_20488112_20488249_20490167
transcript_167163.known	chr6	+	4425	7	FSM	ENSG00000112242.16	ENST00000535432.2	4425	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	28.5331191580747	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTGTGGATGGGTTTT	20403376	False	NA	9	True	AATAAA	-45	NA	20403678	20493714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_20403833_20479845_20479958_20481223_20481426_20482761_20482921_20486688_20486804_20488112_20488249_20490167
transcript_167176.known	chr6	+	3272	16	FSM	ENSG00000145996.11	ENST00000274695.8	3272	16	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_13	16.9241444884717	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTATGTTTTTGAGAATTT	20530329	True	NA	23	True	AATAAA	-23	NA	20534456	21232404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_20534575_20535350_20535395_20546345_20546524_20548592_20548706_20649292_20649378_20739518_20739616_20758594_20758644_20781144_20781266_20846074_20846179_20955418_20955586_21000226_21000373_21065047_21065229_21108400_21108464_21198020_21198105_21201109_21201275_21230847
transcript_167188.known	chr6	+	4869	1	FSM	ENSG00000124766.7	ENST00000244745.4	4869	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGACTTTTGTCGTTATT	21578645	True	NA	23	True	AATAAA	-24	NA	21593750	21598619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_21593800_21598600
transcript_167208.known	chr6	+	1742	10	FSM	ENSG00000272168.9	ENST00000655154.1	1742	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_8	33.9545811378511	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAGTGTAGGTAAGACAG	21664060	True	NA	60	True	AAAAAG	-35	NA	21666387	22194435	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_21666646_21668646_21668900_21783631_21783709_21909469_21909604_21978944_21979063_22020338_22020543_22056545_22056691_22110746_22110819_22191566_22191657_22194044
transcript_167221.known	chr6	+	1455	3	FSM	ENSG00000272168.9	ENST00000659720.1	1455	3	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_2	52.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	21664076	True	NA	NA	False	NA	NA	NA	21666403	21784591	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_21666646_21668646_21668900_21783631
transcript_167223.known	chr6	-	4715	10	FSM	ENSG00000146038.12	ENST00000378454.8	4715	10	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_3	3.2659863237109	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGGCTAAGGGTGTTT	-24357931	True	NA	NA	False	AATAAA	-21	NA	24358059	24171754	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_24174835_24178329_24178633_24205001_24205103_24278048_24278212_24288851_24288907_24290931_24291079_24301714_24301847_24301967_24302045_24353568_24353624_24357457
transcript_16723.known	chr1	-	1912	7	FSM	ENSG00000143183.18	ENST00000367881.11	1912	7	0	0	0	0	multi-exon	FALSE	canonical	3	588	junction_4	38.1400926410341	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGAGAGTTGAATTATTA	-165758350	True	NA	NA	False	AATAAA	-22	NA	165768868	165726794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_165728122_165743166_165743312_165752101_165752170_165754227_165754275_165759524_165759585_165768191_165768270_165768681
transcript_167231.known	chr6	+	3980	12	FSM	ENSG00000124532.15	ENST00000443868.6	3980	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	292.067070300161	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGTTCAGATTTCTGTT	24384647	True	NA	9	True	AATAAA	-22	NA	24402907	24426194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_24403237_24405167_24405242_24408407_24408445_24409460_24409574_24410726_24410800_24412285_24412396_24415032_24415164_24416396_24416514_24418083_24418237_24418460_24418579_24422936_24423051_24423583
transcript_167237.known	chr6	+	3939	11	FSM	ENSG00000124532.15	ENST00000378386.8	3939	11	0	0	0	0	multi-exon	FALSE	canonical	3	730	junction_6	28.318898283655	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTATAAGTTCAGATTTC	24384675	True	NA	5	True	AATAAA	-18	NA	24402935	24426190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_24403237_24405167_24405242_24408407_24408445_24409460_24409574_24412221_24412396_24415032_24415164_24416396_24416514_24418083_24418237_24418460_24418579_24422936_24423051_24423583
transcript_16724.known	chr1	-	1100	7	FSM	ENSG00000143183.18	ENST00000464650.5	1100	7	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_6	218.607461497137	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAGATCTGTTTCATTTT	-165758358	True	NA	-4	True	AATAAA	-32	NA	165768876	165727537	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_165728122_165743166_165743312_165752101_165752170_165754227_165754275_165759524_165759585_165768191_165768270_165768758
transcript_167240.nnic	chr6	+	1981	11	NNC	ENSG00000124532.15	novel	3939	11	NA	NA	0	784	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_9	208.16426206244	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCATTGTATGGATTCCT	24384675	True	NA	15	True	AATAAA	-17	NA	24402935	24424260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_24403237_24405167_24405242_24408407_24408445_24409460_24409574_24412221_24412396_24415032_24415164_24416396_24416514_24418083_24418237_24418460_24418579_24422964_24423051_24423583
transcript_167244.known	chr6	+	2266	11	FSM	ENSG00000112294.14	ENST00000348925.2	2266	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	10.7126093926737	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCTATTCCTGAACCATA	24494733	True	NA	NA	False	NA	NA	NA	24494968	24534303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_24495351_24502522_24502607_24503262_24503434_24504868_24504986_24511829_24511869_24515166_24515311_24520400_24520545_24522766_24522926_24527996_24528167_24532118_24532178_24533506
transcript_167246.known	chr6	+	1740	10	FSM	ENSG00000124532.15	ENST00000378353.5	1740	10	0	0	0	0	multi-exon	FALSE	canonical	3	730	junction_6	29.3030146344479	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGCTTATAGTCCTTTC	24384693	True	NA	8	True	AATAAA	-15	NA	24402953	24423476	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_24403237_24405167_24405242_24408407_24408445_24409460_24409574_24412221_24412396_24415032_24415164_24416396_24416514_24418083_24418237_24418460_24418579_24422936
transcript_167253.known	chr6	+	5131	10	FSM	ENSG00000112294.14	ENST00000357578.8	5131	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	5.96284793999944	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAAGGTGTCTGGTTGTGCT	24494733	True	NA	23	True	AATAAA	-32	NA	24494968	24537207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_24495351_24502522_24502607_24503262_24503434_24504868_24504986_24515166_24515311_24520400_24520545_24522766_24522926_24527996_24528167_24532118_24532178_24533506
transcript_167256.known	chr6	+	3821	9	FSM	ENSG00000124532.15	ENST00000274747.11	3821	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	240.070822883582	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGTTCAGATTTCTGTT	24384647	True	NA	9	True	AATAAA	-22	NA	24402907	24426194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_24403237_24405167_24405242_24412221_24412396_24415032_24415164_24416396_24416514_24418083_24418237_24418460_24418579_24422936_24423051_24423583
transcript_167264.known	chr6	-	1935	7	FSM	ENSG00000111802.14	ENST00000378198.9	1935	7	0	0	0	0	multi-exon	FALSE	canonical	3	446	junction_2	64.4663995168543	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTGTTTTAGTATGT	-24659663	True	NA	-9	True	AATAAA	-15	NA	24666899	24649978	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_24651070_24652982_24653154_24654411_24654531_24657811_24657904_24658560_24658735_24666525_24666612_24666697
transcript_167267.nnic	chr6	-	523	3	NNC	ENSG00000111802.14	novel	714	2	NA	NA	-4	1020	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_1	248.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGATTTCCTGTAATAGGC	-24659667	True	NA	NA	False	AATAAA	-15	NA	24666903	24664966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_24665198_24666525_24666612_24666697
transcript_167268.known	chr6	-	714	2	FSM	ENSG00000111802.14	ENST00000480495.1	714	2	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTTTCCAGGTTCCAGG	-24666755	False	7236	NA	False	NA	NA	NA	24666786	24665986	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_24666612_24666697
transcript_167271.known	chr6	-	2452	5	FSM	ENSG00000112308.13	ENST00000378119.9	2452	5	0	0	0	0	multi-exon	FALSE	canonical	3	2454	junction_2	77.5145147698158	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGAAGTGTTAACTTTTT	-24719133	False	NA	-12	True	AATAAA	-41	NA	24719154	24704860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_24706263_24708776_24708912_24714317_24714441_24716147_24716325_24718539
transcript_167274.known	chr6	+	4391	4	FSM	ENSG00000112304.11	ENST00000537591.5	4391	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	665.740690259103	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGGAGAAAAAAAAAAAA	24666904	False	NA	NA	False	AATAAA	-36	NA	24667034	24705065	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_24667345_24687404_24687694_24697882_24698068_24701458
transcript_167275.known	chr6	+	4041	3	FSM	ENSG00000112304.11	ENST00000230048.5	4041	3	0	0	0	0	multi-exon	FALSE	canonical	3	1365	junction_1	49	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGCTTTTCTTCATTTA	24657928	True	NA	NA	False	AATAAA	-17	NA	24667076	24705046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_24667345_24697882_24698068_24701458
transcript_167279.known	chr6	+	1263	7	FSM	ENSG00000112312.10	ENST00000230056.8	1263	7	0	0	0	0	multi-exon	FALSE	canonical	3	677	junction_1	216.53021344222	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGTTTCTATGCTTT	24757618	True	NA	35	True	AATATA	-19	NA	24774936	24786099	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_24775245_24777221_24777298_24780662_24780741_24781476_24781622_24784086_24784170_24784443_24784555_24785637
transcript_167281.known	chr6	+	1133	7	FSM	ENSG00000112312.10	ENST00000356509.7	1133	7	0	0	0	0	multi-exon	FALSE	canonical	3	633	junction_1	232.733514752149	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTGTCTGTTTCTATG	24757612	True	NA	31	True	AATATA	-15	NA	24774930	24786095	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_24775113_24777221_24777298_24780662_24780741_24781476_24781622_24784086_24784170_24784443_24784555_24785637
transcript_167293.known	chr6	+	580	4	FSM	ENSG00000112312.10	ENST00000476555.5	580	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	581.865963947025	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTATTGTCCCAGAATCTA	24775073	True	NA	NA	False	NA	NA	NA	24775466	24781544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_24775825_24777221_24777298_24780662_24780741_24781476
transcript_167295.known	chr6	-	5295	22	FSM	ENSG00000111913.20	ENST00000643898.2	5295	22	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	16.8074327581094	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTGCAGTCTGATGTTA	-24935040	True	NA	-2	True	AATAAA	-23	NA	24935960	24804283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_24806474_24809716_24809808_24818541_24818626_24825225_24825429_24828136_24828296_24830508_24830671_24832255_24832392_24835702_24835872_24839090_24839273_24842861_24843555_24848024_24848155_24849801_24849951_24850596_24850723_24852574_24852619_24860972_24861037_24865300_24865451_24869093_24869148_24870865_24870890_24872880_24872960_24873643_24873800_24875690_24875818_24935837
transcript_167300.known	chr6	-	2442	14	FSM	ENSG00000111913.20	ENST00000378023.8	2442	14	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_13	14.4570369426021	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGCATCTCCAATTGAG	NA	False	NA	NA	False	AATAAA	-21	NA	24877355	24839358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_24839600_24842861_24843555_24848024_24848155_24849801_24849951_24850596_24850723_24852574_24852619_24860972_24861037_24865300_24865451_24869093_24869148_24870865_24870890_24872880_24872960_24873643_24873800_24875690_24875818_24876950
transcript_167301.known	chr6	-	2200	14	FSM	ENSG00000111913.20	ENST00000644621.1	2200	14	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_13	13.2365819074154	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACTTCTTTTTTGGATAT	-24910877	True	NA	NA	False	NA	NA	NA	24911063	24839441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_24839600_24842861_24843555_24848024_24848155_24849801_24849951_24850596_24850723_24852574_24852619_24860972_24861037_24865300_24865451_24869093_24869148_24870865_24870890_24872880_24872960_24873643_24873800_24875690_24875818_24910817
transcript_167302.nic	chr6	-	2238	14	NIC	ENSG00000111913.20	novel	2442	14	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	8.93169345247552	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGCATCTCCAATTGAG	-24935118	True	NA	NA	False	AATAAA	-21	NA	24936038	24839358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_24839600_24842861_24843555_24848024_24848155_24849801_24849951_24850596_24850723_24852574_24852619_24860972_24861037_24865300_24865451_24869093_24869148_24870865_24870890_24872880_24872960_24873643_24873800_24875690_24875818_24935837
transcript_167303.known	chr6	-	3614	14	FSM	ENSG00000111913.20	ENST00000540914.5	3614	14	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_13	14.8937062280381	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAAAAAAAAAGTGTGG	NA	False	NA	NA	False	AATAAA	-7	NA	24877365	24839372	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_24840776_24842861_24843555_24848024_24848155_24849801_24849951_24850596_24850723_24852574_24852619_24860972_24861037_24865300_24865451_24869093_24869148_24870865_24870890_24872880_24872960_24873643_24873800_24875690_24875818_24876950
transcript_167304.known	chr6	-	2646	14	FSM	ENSG00000111913.20	ENST00000647136.1	2646	14	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_13	13.7199375505333	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTGACAGAGCAAGACCT	-24910699	False	NA	NA	False	NA	NA	NA	24910885	24839993	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_24840776_24842861_24843555_24848024_24848155_24849801_24849951_24850596_24850723_24852574_24852619_24860972_24861037_24865300_24865451_24869093_24869148_24870865_24870890_24872880_24872960_24873643_24873800_24875690_24875818_24910817
transcript_167305.known	chr6	-	2704	14	FSM	ENSG00000111913.20	ENST00000645100.1	2704	14	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	9.69963093301422	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACCTTGTCTCAAAAAAAAA	-24935028	True	NA	NA	False	NA	NA	NA	24935948	24839978	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_24840776_24842861_24843555_24848024_24848155_24849801_24849951_24850596_24850723_24852574_24852619_24860972_24861037_24865300_24865451_24869093_24869148_24870865_24870890_24872880_24872960_24873643_24873800_24875690_24875818_24935837
transcript_16732.nic	chr1	-	345	3	ISM	ENSG00000143183.18	ENST00000628579.1	477	4	31	4635	-3	-4635	5prime_fragment	FALSE	canonical	3	661	junction_1	1	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGTAAGATGAGATATTAG	-165758373	True	NA	NA	False	AAAAAG	-5	NA	165768891	165759527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_165759585_165768191_165768270_165768681
transcript_167322.known	chr6	+	5485	37	FSM	ENSG00000079691.18	ENST00000329474.7	5485	37	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_28	7.36289286612434	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGCCTTCTCCAGTTAC	25276715	True	NA	18	True	AATAAA	-19	NA	25279373	25620530	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_25279836_25284811_25284910_25420113_25420165_25426500_25426561_25435482_25435605_25449897_25449996_25450338_25450410_25450637_25450712_25465872_25465949_25471168_25471258_25472426_25472522_25482256_25482344_25488481_25488586_25491731_25491810_25491947_25492025_25495110_25495216_25500165_25500236_25509655_25509738_25510506_25510607_25510707_25510763_25515674_25515848_25517346_25517416_25520243_25520338_25528794_25528894_25537854_25537984_25539946_25540079_25550909_25551086_25554008_25554097_25556700_25556851_25580923_25580991_25581242_25581440_25594414_25594528_25600313_25600747_25604811_25604894_25606060_25606274_25610049_25610182_25619446
transcript_167327.nic	chr6	+	2489	23	ISM	ENSG00000079691.18	ENST00000329474.7	5485	37	-119	100213	-119	47686	5prime_fragment	FALSE	canonical	3	53	junction_2	6.12355565699353	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAGACGCTCTGCAAAAG	25279022	False	NA	NA	False	AAAACA	-14	NA	25279254	25520317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_25279836_25284811_25284910_25420113_25420165_25426500_25426561_25435482_25435605_25449897_25449996_25450338_25450410_25450637_25450712_25465872_25465949_25471168_25471258_25472426_25472522_25482256_25482344_25488481_25488586_25491731_25491810_25491947_25492025_25495110_25495216_25500165_25500236_25509655_25509738_25510506_25510607_25510707_25510763_25515674_25515848_25517346_25517416_25520243
transcript_16733.nic	chr1	-	303	2	ISM	ENSG00000143183.18	ENST00000628579.1	477	4	15	13300	11	-13300	5prime_fragment	FALSE	canonical	3	663	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAGTATGGCAACACATT	-165758389	True	NA	NA	False	AGTAAA	-4	NA	165768907	165768192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_165768270_165768681
transcript_167330.nic	chr6	+	2270	19	ISM	ENSG00000079691.18	ENST00000329474.7	5485	37	-292	109945	4	37954	5prime_fragment	FALSE	canonical	3	53	junction_2	6.52819147625261	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAATAATATGAAATCCA	25278849	True	NA	NA	False	AGTAAA	-36	NA	25279081	25510585	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_25279836_25284811_25284910_25420113_25420165_25426500_25426561_25435482_25435605_25449897_25449996_25450338_25450410_25450637_25450712_25465872_25465949_25471168_25471258_25472426_25472522_25482256_25482344_25488481_25488586_25491731_25491810_25491947_25492025_25495110_25495216_25500165_25500236_25509655_25509738_25510506
transcript_167334.known	chr6	+	9418	8	FSM	ENSG00000112343.11	ENST00000357085.5	9418	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.19522860933439	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACGTTTTCACCTTTCTG	25962512	True	NA	NA	False	ATTAAA	-23	NA	25962801	25991231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_25962856_25963048_25963283_25966334_25966934_25969324_25969421_25971868_25972100_25973053_25973077_25973172_25973286_25983163
transcript_16734.known	chr1	+	4838	8	FSM	ENSG00000143179.16	ENST00000642653.1	4838	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	212.5010444152	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAAAGGCTCTCGCCTTC	165825713	True	NA	9	True	AATAAA	-6	NA	165827804	165911608	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_165827933_165885141_165885380_165890203_165890364_165891225_165891323_165896189_165896333_165903181_165903280_165905920_165905970_165907683
transcript_167340.known	chr6	+	508	1	FSM	ENSG00000275714.2	ENST00000613854.2	508	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAAAGTAGCTGTAAGAA	25940065	True	NA	NA	False	NA	NA	NA	26020450	26020958	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_26020400_26021000
transcript_167341.known	chr6	-	511	1	FSM	ENSG00000286522.2	ENST00000621411.3	511	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCCAACGAAAGTAGCTGT	-25972231	True	NA	NA	False	NA	NA	NA	26032099	26031588	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_26031600_26032100
transcript_167342.known	chr6	-	731	1	FSM	ENSG00000187837.4	ENST00000343677.4	731	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGATCTCAATAAAAGAGCT	-25992203	True	NA	1	True	NA	NA	NA	26056470	26055739	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_26055700_26056500
transcript_167344.known	chr6	+	405	1	FSM	ENSG00000197061.5	ENST00000377803.4	405	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2818	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTCGTTTAAAGAGCTG	25998487	True	NA	25	True	AAAACA	-40	NA	26103932	26104337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_26103900_26104300
transcript_167345.known	chr6	-	659	2	FSM	ENSG00000180596.8	ENST00000314332.5	659	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTCTTTTTATATGTATA	-25979544	True	NA	NA	False	ATTAAA	-18	NA	26123910	26114872	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_26115136_26123514
transcript_167350.nnic	chr6	+	961	3	NNC	ENSG00000180573.10	novel	1668	2	NA	NA	0	-712	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	17	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGGTGGTCACTTTTC	26049675	True	NA	17	True	AGTAAA	-33	NA	26124171	26138372	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_26124750_26127697_26127762_26138053
transcript_167352.known	chr6	+	1668	2	FSM	ENSG00000180573.10	ENST00000314088.6	1668	2	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGTCATTAATTTTCT	NA	False	NA	15	True	AATAAA	-24	NA	26124144	26139116	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_26124750_26138053
transcript_167356.known	chr6	+	1462	2	FSM	ENSG00000180573.10	ENST00000602637.1	1462	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGTAATAAAAGGTAATGCAA	26049706	True	NA	-17	True	AATAGA	-32	NA	26124202	26139084	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_26124634_26138053
transcript_167358.known	chr6	+	787	1	FSM	ENSG00000168298.7	ENST00000304218.6	787	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGCTCTCAGTAAAAGAGCT	26123069	True	NA	12	True	NA	NA	NA	26156328	26157115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_26156300_26157100
transcript_167359.known	chr6	+	789	2	FSM	ENSG00000158373.9	ENST00000289316.2	789	2	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCTTCATTGTTGATC	26132278	False	NA	5	True	AATAAA	-20	NA	26158145	26171349	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_26158560_26170974
transcript_167360.known	chr6	-	403	1	FSM	ENSG00000277157.2	ENST00000614247.2	403	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCACTCAGGAGAAAGAGTA	-26102104	True	NA	NA	False	NA	NA	NA	26189112	26188709	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_26188700_26189100
transcript_167361.known	chr6	-	503	1	FSM	ENSG00000197409.8	ENST00000356476.3	503	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTTCTATAAAAGTTGCT	-26148107	True	NA	-30	True	NA	NA	NA	26197286	26196783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_26196800_26197300
transcript_167362.known	chr6	-	948	2	FSM	ENSG00000282988.2	ENST00000635200.1	948	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTCCGTAAACTGGAACC	-26170692	True	NA	0	True	TATAAA	-18	NA	26199293	26196753	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_26197267_26198858
transcript_167363.known	chr6	-	1534	1	FSM	ENSG00000273802.3	ENST00000541790.4	489	1	-4	-1041	-4	1041	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACAGTTTTGGCTGGCTG	-26202788	False	NA	NA	False	CATAAA	-28	NA	26216692	26215158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_26215200_26216700
transcript_167364.known	chr6	+	2679	2	FSM	ENSG00000274750.3	ENST00000634733.1	2679	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAACATTGAGTGCATTCC	26223341	True	NA	5	True	AATAAA	-17	NA	26224198	26227473	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_26224306_26224901
transcript_167365.known	chr6	-	494	1	FSM	ENSG00000277775.2	ENST00000618052.2	494	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATTTCAGTTGAAAGCG	-26215424	True	NA	-2	True	NA	NA	NA	26250635	26250141	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_26250100_26250600
transcript_167366.known	chr6	+	2060	1	FSM	ENSG00000275713.3	ENST00000619466.3	462	1	37	-1635	37	1635	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGTGTGAGTTAGTATT	26251587	False	NA	1	True	AATAAA	-17	NA	26251650	26253710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_26251600_26253700
transcript_167367.known	chr6	-	2411	1	FSM	ENSG00000273983.2	ENST00000614378.2	496	1	-402	-1513	-402	1513	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAGCTTCAATAACAACAT	NA	False	NA	NA	False	AATAAA	-17	NA	26271815	26269404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_26269400_26271800
transcript_167368.known	chr6	-	1034	2	FSM	ENSG00000158406.6	ENST00000634560.1	1034	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACCCTCCAATGGCTCT	-26169771	True	NA	-8	True	AATAAA	-31	NA	26285534	26281054	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_26281588_26285033
transcript_167371.known	chr6	+	3776	11	FSM	ENSG00000186470.14	ENST00000377708.7	3776	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	2.23830292855994	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCAACTTGGTTTTTTC	26365129	True	NA	7	True	AATAAA	-18	NA	26365197	26378312	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_26365353_26367989_26368051_26368177_26368268_26368564_26368913_26370321_26370604_26372896_26373098_26373275_26373297_26373386_26373414_26374326_26374374_26374770_26374799_26375796
transcript_167375.known	chr6	+	3733	10	FSM	ENSG00000186470.14	ENST00000508906.6	3733	10	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_6	2.34652356466032	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTTTTTCTAGACTGT	NA	False	NA	15	True	AATAAA	-26	NA	26365158	26378320	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_26365353_26367989_26368051_26368564_26368913_26370321_26370604_26372896_26373098_26373275_26373297_26373386_26373414_26374326_26374374_26374770_26374799_26375796
transcript_16738.known	chr1	+	4801	7	FSM	ENSG00000143179.16	ENST00000367879.9	4801	7	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_3	32.170120712653	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGCCTTCTGTGTGATGC	165819757	True	NA	19	True	AATAAA	-16	NA	165827613	165911618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_165827933_165890203_165890364_165891225_165891323_165896189_165896333_165903181_165903280_165905920_165905970_165907683
transcript_167380.known	chr6	+	3583	8	FSM	ENSG00000124508.17	ENST00000356709.9	3583	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	9.72058619211657	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAGCTTGAATGGTAGTA	26381847	True	NA	6	True	AATAAA	-16	NA	26383107	26394874	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_26383182_26383791_26383916_26385014_26385363_26388012_26388295_26390004_26390212_26390686_26390708_26390802_26390830_26392374
transcript_167385.known	chr6	+	2733	8	FSM	ENSG00000124508.17	ENST00000416795.6	2733	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	16.0038260731486	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGTTAACTTTTTCCAG	26381947	True	NA	12	True	AATAAA	-17	NA	26383207	26393992	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_26383314_26383791_26383916_26385014_26385363_26388012_26388295_26390004_26390212_26390686_26390708_26390802_26390830_26392374
transcript_167399.known	chr6	+	1068	6	FSM	ENSG00000124508.17	ENST00000482536.5	1068	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	13.5735036007657	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATCTCAGCAGCCACCGC	26381865	True	NA	NA	False	NA	NA	NA	26383125	26393007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_26383182_26383791_26383916_26390004_26390212_26390686_26390708_26390802_26390830_26392374
transcript_167400.known	chr6	+	1790	8	FSM	ENSG00000124508.17	ENST00000469230.5	1790	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	18.7834056158784	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAGCTTGAATGGTAGTA	26381835	True	NA	6	True	AATAAA	-16	NA	26383095	26394874	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_26383300_26383791_26383916_26385014_26385363_26388012_26388295_26390004_26390212_26390686_26390708_26390802_26390830_26394297
transcript_167404.known	chr6	+	3388	10	FSM	ENSG00000026950.17	ENST00000289361.11	3388	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	2.53859103528797	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCAACTTGGCTTTTTC	26402164	True	NA	9	True	AATAAA	-18	NA	26402274	26415208	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_26402413_26405371_26405649_26405908_26406257_26407670_26407953_26409532_26409734_26409893_26409915_26410005_26410033_26411108_26411136_26411554_26411582_26413168
transcript_167409.known	chr6	+	3024	9	FSM	ENSG00000112763.17	ENST00000377600.7	3024	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	13.2829778287852	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTGATTAACTTTTTCCA	26457173	True	NA	9	True	AATAAA	-18	NA	26457921	26469637	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_26458143_26458606_26458719_26459480_26459829_26462796_26462898_26463243_26463526_26465184_26465407_26465952_26465974_26466061_26466089_26467947
transcript_167414.known	chr6	+	3113	8	FSM	ENSG00000112763.17	ENST00000429381.5	3113	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	13.5586405916625	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTGATTAACTTTTTCCA	26457212	True	NA	9	True	AATAAA	-18	NA	26457960	26469637	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_26458143_26458606_26458719_26459480_26459829_26463243_26463526_26465184_26465407_26465952_26465974_26466061_26466089_26467718
transcript_167415.known	chr6	+	2890	8	FSM	ENSG00000112763.17	ENST00000312541.10	2890	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	7.32343178170074	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTGATTAACTTTTTCCA	26457206	True	NA	9	True	AATAAA	-18	NA	26457954	26469637	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_26458143_26458606_26458719_26459480_26459829_26463243_26463526_26465184_26465407_26465952_26465974_26466061_26466089_26467947
transcript_167416.known	chr6	+	1687	8	FSM	ENSG00000112763.17	ENST00000469185.5	1687	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	14.8406501865378	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGTTTGACTCTTTTTG	26457219	True	NA	9	True	AATAAA	-17	NA	26457967	26476621	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_26458143_26458606_26458719_26459480_26459829_26463243_26463526_26465184_26465407_26465952_26465974_26466061_26466089_26476121
transcript_167422.known	chr6	+	2845	7	FSM	ENSG00000112763.17	ENST00000541522.5	2845	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	14.5459043491057	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGATCTAATGTGTGGCT	NA	False	NA	25	True	AATAAA	-34	NA	26457903	26469653	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_26458143_26459480_26459829_26463243_26463526_26465184_26465407_26465952_26465974_26466061_26466089_26467947
transcript_167427.nnic	chr6	+	1653	3	NNC	ENSG00000182952.5	novel	1943	2	NA	NA	-16	-432	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_2	9.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGTCTTTTGATGGTTT	26533221	True	NA	29	True	ATTAAA	-15	NA	26538349	26546501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_26538502_26539900_26540027_26545126
transcript_167428.nnic	chr6	+	2089	3	NNC	ENSG00000182952.5	novel	1943	2	NA	NA	-16	4	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_2	9.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTTCTTGTTAATATTTC	26533221	True	NA	NA	False	AATAAA	-22	NA	26538349	26546937	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_26538502_26539900_26540027_26545126
transcript_167429.known	chr6	+	1943	2	FSM	ENSG00000182952.5	ENST00000377575.3	1943	2	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_1	0	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGTCTTCTTGTTAATA	26533237	True	NA	NA	False	AATAAA	-18	NA	26538365	26546933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_26538502_26545126
transcript_167431.known	chr6	+	2943	3	FSM	ENSG00000146109.5	ENST00000274849.3	2943	3	0	0	0	0	multi-exon	FALSE	canonical	3	734	junction_2	15.5	484	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAATTTGCCTCTTAATAT	26589958	True	NA	11	True	ATTAAA	-20	NA	26596952	26600739	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_26597224_26597913_26598111_26598264
transcript_167432.known	chr6	-	4811	4	FSM	ENSG00000181315.11	ENST00000415922.7	4811	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	11.0855260988773	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCGTCTCCACTGTACTG	-26657842	True	NA	0	True	AATAAA	-22	NA	26659746	26634382	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_26638729_26643658_26643729_26658557_26658647_26659440
transcript_167436.known	chr6	-	467	3	FSM	ENSG00000181315.11	ENST00000465674.5	467	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	68	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAATGACTGTGAGGGC	-26657831	True	NA	NA	False	NA	NA	NA	26659735	26638626	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_26638729_26643658_26643729_26659440
transcript_167437.known	chr6	-	587	3	FSM	ENSG00000181315.11	ENST00000480036.5	587	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	62	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTTTATTCATATGCA	-26657781	True	NA	NA	False	AATATA	-26	NA	26659685	26638475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_26638729_26658557_26658647_26659440
transcript_167446.nnic	chr6	-	2092	6	NIC	ENSG00000241549.8	novel	1203	9	NA	NA	-407	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	10.8332820511607	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAGGGTCTTCAAAGAC	NA	False	NA	NA	False	NA	NA	NA	26956961	26877920	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_26878836_26883342_26883518_26885358_26885444_26889009_26889198_26925119_26925276_26956388
transcript_167450.known	chr6	+	1062	3	FSM	ENSG00000224843.8	ENST00000666341.1	1062	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTGAAGATAGTTTGTTA	27019886	False	NA	NA	False	AATAAA	-24	NA	27019904	27023931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_27020656_27023253_27023398_27023764
transcript_167451.known	chr6	+	495	4	FSM	ENSG00000224843.8	ENST00000424968.6	495	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4.78423336480244	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGAGCTTTGAAGATAGT	27020273	False	NA	NA	False	AATAAA	-18	NA	27020324	27023925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_27020415_27020555_27020656_27023253_27023398_27023764
transcript_167453.known	chr6	-	950	2	FSM	ENSG00000124635.9	ENST00000607124.1	950	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTGTTGCCAACTGGAA	-27112916	True	NA	-12	True	AATAAA	-24	NA	27132750	27125896	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_27126463_27132366
transcript_167454.known	chr6	-	408	2	FSM	ENSG00000124635.9	ENST00000606923.1	408	2	0	0	0	0	multi-exon	TRUE	canonical	2	22	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCCTTATTCATTGGC	-27112714	False	NA	-14	True	TATAAA	-15	NA	27132548	27126078	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_27126463_27132524
transcript_167456.known	chr6	+	2250	1	FSM	ENSG00000196787.4	ENST00000359193.4	493	1	-1	-1756	-1	1756	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCAAGGTTAAGTTTTTAA	27017878	True	NA	2	True	AATAAA	-18	NA	27133041	27135291	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_27133000_27135300
transcript_167457.nnic	chr6	-	839	2	Genic_Genomic	ENSG00000197903.8	novel	495	1	NA	NA	-3	8068	multi-exon	FALSE	canonical	3	121	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCTTGTCAGTTGATTT	-27117235	True	NA	-26	True	AATAAA	-21	NA	27146858	27138292	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Genic_Genomic_chr6_-_27138682_27146408
transcript_167458.known	chr6	-	495	1	FSM	ENSG00000197903.8	ENST00000356950.2	495	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATCGATATTAGAGCTG	-27117232	True	NA	-2	True	NA	NA	NA	27146855	27146360	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_27146400_27146900
transcript_167459.known	chr6	+	457	1	FSM	ENSG00000274997.2	ENST00000377459.3	457	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTACACTGTCTTAGAGAA	27089800	True	NA	NA	False	AAAACA	-20	NA	27147105	27147562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_27147100_27147600
transcript_167465.known	chr6	+	955	5	FSM	ENSG00000112812.16	ENST00000488649.5	955	5	0	0	0	0	multi-exon	TRUE	canonical	3	45	junction_1	20.5836707124847	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTTCTTTTTCTGGACT	27250549	True	NA	NA	False	GGGGCT	-7	NA	27251193	27255662	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_27251265_27252807_27252950_27254692_27254873_27254985_27255132_27255246
transcript_167468.known	chr6	+	962	5	FSM	ENSG00000112812.16	ENST00000468138.5	962	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	21.4403241579972	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACCCTTTCCACTCCCTG	27251346	True	NA	NA	False	NA	NA	NA	27251619	27255319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_27252041_27252807_27252950_27254692_27254873_27254985_27255132_27255246
transcript_167470.known	chr6	+	1002	4	FSM	ENSG00000112812.16	ENST00000492575.5	1002	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	31.3723161756065	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTCTTGCTCTGCCATG	27250568	True	NA	NA	False	NA	NA	NA	27251212	27255908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_27251265_27252807_27252950_27254985_27255132_27255246
transcript_167471.nnic	chr6	-	3346	5	FSM	ENSG00000204789.5	ENST00000687798.1	4696	5	44	1306	44	8	multi-exon	FALSE	canonical	3	30	junction_4	34.3074335968169	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGTGTCATGTAGCTGTT	-27373378	True	NA	-9	True	AATAAA	-14	NA	27375187	27357822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_27360222_27363178_27363303_27367516_27367613_27370135_27370225_27374549
transcript_167474.nnic	chr6	-	778	5	FSM	ENSG00000204789.5	ENST00000692173.1	4164	5	-12	3398	-12	-1597	multi-exon	FALSE	canonical	3	60	junction_4	21.4650879336657	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTATGATGGAAAAAAAAAAA	-27375271	False	NA	NA	False	AAGAAA	-1	NA	27375289	27359848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_27360222_27363178_27363303_27367516_27367613_27370135_27370225_27375193
transcript_167479.known	chr6	-	2397	1	FSM	ENSG00000204789.5	ENST00000416749.2	1603	1	-367	-427	-367	6	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACGTGTCATGTAGCTG	NA	False	NA	-11	True	AATAAA	-12	NA	27360221	27357824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_27357800_27360200
transcript_167481.known	chr6	+	749	4	FSM	ENSG00000124613.9	ENST00000461521.1	749	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	12.675435561221	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGCCTTTTGAATGCAA	27388649	True	NA	NA	False	NA	NA	NA	27388991	27400769	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_27389076_27395016_27395096_27399441_27399551_27400292
transcript_167482.known	chr6	+	325	2	FSM	ENSG00000124613.9	ENST00000482767.1	325	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAACTGTCCATTGTCATT	27388844	False	NA	6	True	CATAAA	-21	NA	27388903	27391132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_27389076_27390979
transcript_167483.known	chr6	-	3328	6	FSM	ENSG00000096654.16	ENST00000683788.1	3328	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	8.89044430835715	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGTCTGTTTTTAATAT	-27472725	False	NA	-4	True	ATTAAA	-18	NA	27473105	27450746	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_27453261_27456825_27456922_27457282_27457410_27467852_27467921_27472287_27472434_27472728
transcript_167484.known	chr6	-	3101	6	FSM	ENSG00000096654.16	ENST00000211936.10	3101	6	0	0	0	0	multi-exon	TRUE	canonical	2	16	junction_5	16.1691063451262	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGTTTTTAATATTCTA	NA	False	NA	0	True	ATTAAA	-22	NA	27473118	27450742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_27453261_27456825_27456922_27457282_27457410_27467852_27467921_27472287_27472434_27472972
transcript_167485.known	chr6	-	2899	6	FSM	ENSG00000096654.16	ENST00000377419.1	2899	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	17.6	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCTCAAATTAACAATTCAA	-27472301	False	NA	-15	True	AATAAA	-16	NA	27472681	27450819	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_27453261_27456825_27456922_27457282_27457410_27467852_27467921_27472287_27472434_27472660
transcript_16749.known	chr1	-	2481	2	FSM	ENSG00000188859.7	ENST00000354422.4	2481	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTGAGTTTCTGAAT	-166166991	False	NA	NA	False	NA	NA	NA	166167001	166069298	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_166070764_166165985
transcript_167490.known	chr6	+	728	4	FSM	ENSG00000281706.4	ENST00000662411.2	1496	4	414	354	356	63	multi-exon	FALSE	canonical	2	3	junction_2	5.35412613473634	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATGCAGGTGCCTCTTTT	27694192	False	NA	NA	False	NA	NA	NA	27694440	27713352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_27694507_27702313_27702418_27710680_27710890_27713003
transcript_167493.known	chr6	-	488	1	FSM	ENSG00000185130.6	ENST00000377401.4	451	1	-2	-35	-2	35	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGGGGGGCGAGGGGTC	-27807487	False	118428	NA	False	NA	NA	NA	27807931	27807443	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_27807400_27807900
transcript_167494.known	chr6	+	503	1	FSM	ENSG00000196747.5	ENST00000358739.5	495	1	26	-34	26	34	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATTTCTCGTCTTTGCCT	27707015	False	NA	39	True	NA	NA	NA	27808198	27808701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_27808200_27808700
transcript_167495.known	chr6	+	1237	1	FSM	ENSG00000278828.2	ENST00000369163.4	1250	1	13	0	13	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTTTTTTCACCCTAGAA	27659601	False	NA	3	True	AATAAA	-18	NA	27810063	27811300	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_27810100_27811300
transcript_167496.known	chr6	-	476	1	FSM	ENSG00000276368.2	ENST00000333151.5	476	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAATCATAAAAAGATGACA	-27696349	True	NA	1	True	CATAAA	-29	NA	27814777	27814301	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_27814300_27814800
transcript_167497.known	chr6	+	389	1	FSM	ENSG00000197238.5	ENST00000355057.3	389	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTCAGCTGAAGAGTGG	27824074	False	NA	18	True	AATAAA	-24	NA	27824091	27824480	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_27824100_27824500
transcript_167498.known	chr6	-	496	1	FSM	ENSG00000275221.2	ENST00000618958.2	496	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTCACCAAGTAGAGCT	-27824417	True	NA	NA	False	AAAAAG	-21	NA	27838375	27837879	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_27837900_27838400
transcript_167499.known	chr6	+	482	1	FSM	ENSG00000276903.2	ENST00000613174.2	482	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTCTGCGGGAGAGCTG	27749701	True	NA	NA	False	AATACA	-24	NA	27865316	27865798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_27865300_27865800
transcript_167500.known	chr6	-	797	1	FSM	ENSG00000184357.5	ENST00000331442.5	797	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACCTCTAAAAAATGGCT	-27752832	True	NA	NA	False	NA	NA	NA	27867588	27866791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_27866800_27867600
transcript_167501.known	chr6	-	502	1	FSM	ENSG00000275379.2	ENST00000616365.2	502	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGTCACCAAAAGGAAGCT	-27787575	True	NA	NA	False	NA	NA	NA	27872346	27871844	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_27871800_27872300
transcript_167502.known	chr6	-	512	1	FSM	ENSG00000197153.5	ENST00000359303.4	512	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTCACTGAGGATAGCT	-27890814	False	154151	NA	False	NA	NA	NA	27890826	27890314	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_27890300_27890800
transcript_167503.known	chr6	-	487	1	FSM	ENSG00000278677.2	ENST00000359611.4	487	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTTCTACGGAAGAACTG	-27739034	True	NA	25	True	TTTAAA	-44	NA	27893185	27892698	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_27892700_27893200
transcript_167505.known	chr6	-	1536	2	FSM	ENSG00000269293.4	ENST00000602810.2	1983	2	447	0	-19	0	multi-exon	FALSE	canonical	3	61	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGGTATGATTGTTTTT	-28136834	False	NA	NA	False	AATAAA	-12	NA	28136866	28121797	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_28123212_28136744
transcript_167507.known	chr6	+	1954	4	FSM	ENSG00000197279.5	ENST00000683778.1	1954	4	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	13.6707311029399	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCAGTTTCTGGTGTTCAA	28080555	False	NA	19	True	AATAAA	-33	NA	28080567	28089563	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_28080971_28085480_28085892_28086171_28086311_28088562
transcript_167509.known	chr6	-	686	2	FSM	ENSG00000272009.1	ENST00000605945.1	686	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGCCTTAAAGTGTGAAC	NA	False	NA	-7	True	ATTAAA	-25	NA	28081130	28078791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_28078973_28080625
transcript_167511.known	chr6	+	1279	4	FSM	ENSG00000196812.6	ENST00000340487.5	1279	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	24.1430919496424	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTACCTGAGTAAAATATCC	28123371	True	NA	8	True	ATTAAA	-19	NA	28124608	28130082	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_28124678_28125412_28125831_28126782_28126922_28129429
transcript_167514.known	chr6	+	1601	4	FSM	ENSG00000137185.13	ENST00000531979.5	1601	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	8.33999733546454	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGATTTGGTATCTGTG	28224556	True	NA	24	True	AATAAA	-25	NA	28225291	28233482	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_28225331_28227011_28227505_28227689_28227838_28232561
transcript_167516.known	chr6	+	2062	3	FSM	ENSG00000137185.13	ENST00000527436.5	2062	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	9	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATTAAAATTGCTTCTG	28224603	True	NA	43	True	AGTAAA	-37	NA	28225338	28229230	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_28225367_28227011_28227505_28227689
transcript_167517.known	chr6	+	2171	4	FSM	ENSG00000137185.13	ENST00000647743.1	2171	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	6.12825877028341	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCAACATGCCTGAAAGAT	28224563	True	NA	12	True	AATAAA	-13	NA	28225298	28233470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_28225367_28227011_28227505_28227664_28228366_28232561
transcript_167518.known	chr6	-	5346	5	FSM	ENSG00000187626.9	ENST00000377294.3	5346	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	4.47213595499958	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTGACAGTATTGGTCT	-28251784	True	NA	NA	False	AATAAA	-27	NA	28252269	28241696	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_28245976_28246968_28247093_28248066_28248150_28249686_28249835_28251557
transcript_167522.nnic	chr6	-	2108	5	NNC	ENSG00000187626.9	novel	5346	5	NA	NA	0	-2929	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_4	10.770329614269	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATGTTGTCTATATTTC	-28251784	True	NA	5	True	AATAAA	-43	NA	28252269	28244625	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_28245976_28246968_28247093_28248066_28248150_28249686_28249835_28251866
transcript_167526.known	chr6	+	3100	7	FSM	ENSG00000137338.6	ENST00000259883.3	3100	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	14.4501057281791	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTTGTGCACTTATTTA	28279826	True	NA	3	True	NA	NA	NA	28281571	28302549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_28281919_28283755_28284210_28285550_28285708_28287079_28287169_28296815_28296946_28297894_28297992_28300723
transcript_167531.known	chr6	+	2362	4	FSM	ENSG00000197062.12	ENST00000316606.10	2362	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	6.94422221866655	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCCTGCAGATTTATTT	28267023	False	NA	11	True	AATAAA	-11	NA	28267057	28278201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_28267214_28271853_28271935_28272669_28272788_28276194
transcript_167534.known	chr6	+	1998	4	FSM	ENSG00000197062.12	ENST00000623276.3	1998	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	23.5513623102076	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTACTCTCAAAGGTGT	28266229	True	NA	18	True	AATAAA	-19	NA	28267152	28277530	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_28267214_28271853_28272337_28272669_28272788_28276194
transcript_167537.known	chr6	+	2321	4	FSM	ENSG00000197062.12	ENST00000614088.1	2321	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	22.553639765383	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGTTTGTGGAAGATAA	28267318	True	NA	31	True	AATAAA	-31	NA	28267358	28278221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_28267454_28271853_28271935_28272669_28272788_28276194
transcript_167539.known	chr6	+	3080	7	FSM	ENSG00000137338.6	ENST00000682144.1	3080	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	9.70251971855192	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTTGTGCACTTATTTA	28279826	True	NA	3	True	NA	NA	NA	28281571	28302549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_28281919_28283775_28284210_28285550_28285708_28287079_28287169_28296815_28296946_28297894_28297992_28300723
transcript_16754.nnic	chr1	+	3880	7	NNC	ENSG00000143157.12	novel	5751	6	NA	NA	-43	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	66.6101844064905	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCTATGGTGATTTTATT	166836563	True	NA	16	True	AATAAA	-19	NA	166839403	166854471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_166839605_166840954_166841089_166846611_166846739_166847493_166847593_166848937_166849735_166849788_166850424_166852584
transcript_167544.known	chr6	+	4687	6	FSM	ENSG00000189298.14	ENST00000252211.7	4687	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	10.9105453575887	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGGATTCTTAAATT	28349203	True	NA	7	True	AATAAA	-17	NA	28349946	28369172	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_28350068_28359524_28359989_28361323_28361472_28363302_28363386_28363691_28363816_28365425
transcript_167549.nnic	chr6	+	2104	6	NNC	ENSG00000189298.14	novel	4687	6	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	16.5843299533023	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGTGAGATTACCTTCAT	28349170	True	NA	7	True	AATAAA	-15	NA	28349913	28366746	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_28349965_28359524_28359902_28361323_28361472_28363302_28363386_28363691_28363816_28365425
transcript_167550.nnic	chr6	+	2191	6	NNC	ENSG00000189298.14	novel	4687	6	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_1	13.145341380124	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGTGAGATTACCTTCAT	28349170	True	NA	7	True	AATAAA	-15	NA	28349913	28366746	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_28349965_28359524_28359989_28361323_28361472_28363302_28363386_28363691_28363816_28365425
transcript_167554.known	chr6	+	1794	5	FSM	ENSG00000189298.14	ENST00000341464.9	1794	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	19.6659604392971	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGTGAGATTACCTTCAT	28349206	True	NA	7	True	AATAAA	-15	NA	28349949	28366746	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_28350068_28361323_28361472_28363302_28363386_28363691_28363816_28365425
transcript_167556.known	chr6	-	3050	4	FSM	ENSG00000235109.8	ENST00000439158.5	3050	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	13.0213499897497	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGCTTTGAAGTTTAT	-28335831	True	NA	3	True	AATAAA	-30	NA	28336134	28324736	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_28326855_28327382_28327534_28329302_28329779_28335829
transcript_167557.known	chr6	-	2812	4	FSM	ENSG00000235109.8	ENST00000344279.11	2812	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	7.87400787401181	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGCTTTGAAGTTTAT	-28335845	True	NA	3	True	AATAAA	-30	NA	28336148	28324736	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_28326855_28327382_28327534_28329302_28329779_28336081
transcript_167558.known	chr6	-	1005	3	FSM	ENSG00000235109.8	ENST00000435857.5	1005	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	10	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTTTCCAGCATCTCCG	NA	False	NA	NA	False	NA	NA	NA	28336375	28326294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_28326855_28327382_28327534_28336081
transcript_16756.nnic	chr1	+	2967	6	NNC	ENSG00000143157.12	novel	5751	6	NA	NA	4	2264	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	72.9575218877396	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTGCGTATCTAGGACTCT	166836638	True	NA	NA	False	AATAAA	-2	NA	166839478	166851472	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_166839605_166840954_166841089_166846611_166846739_166847493_166847593_166848937_166849735_166849788
transcript_167564.known	chr6	-	3909	6	FSM	ENSG00000158691.15	ENST00000396827.3	3909	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	11.160645142643	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGTAACTTGCTTATTC	-28398675	True	NA	NA	False	AATAAA	-14	NA	28399731	28379218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_28380872_28382190_28382610_28390595_28391743_28392901_28393047_28398003_28398474_28399656
transcript_167565.known	chr6	-	7711	4	FSM	ENSG00000158691.15	ENST00000684592.1	7711	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	4.49691252107735	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGAATATTTTTGTGTT	-28398691	True	NA	-6	True	TATAAA	-14	NA	28399747	28384737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_28391743_28392901_28393047_28398003_28398474_28399656
transcript_167569.nnic	chr6	-	2465	3	NNC	ENSG00000158691.15	novel	3909	6	NA	NA	16334	-5	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	10	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGACTGTGTTCTGTAAA	-28383165	True	NA	-3	True	AATAAA	-16	NA	28383397	28378959	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_28380872_28382190_28382610_28383263
transcript_167579.known	chr6	-	5935	4	FSM	ENSG00000232040.4	ENST00000452236.3	5935	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	5.71547606649408	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTTATTGTGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	28587298	28570534	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_28573828_28574643_28576137_28579271_28579420_28586297
transcript_16758.known	chr1	+	5751	6	FSM	ENSG00000143157.12	ENST00000367876.9	5751	6	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_5	21.2320512433443	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGGCATACCTTAGTTG	166836634	True	NA	NA	False	AAAAAG	-21	NA	166839474	166856359	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_166839605_166840954_166841089_166846611_166846739_166847493_166847593_166848937_166850424_166852584
transcript_167582.known	chr6	-	709	2	FSM	ENSG00000225173.2	ENST00000457253.2	1390	2	52	629	52	-629	multi-exon	FALSE	canonical	3	17	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCCACAGTGCTGGGATT	NA	False	NA	NA	False	NA	NA	NA	28839006	28837868	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_28838321_28838749
transcript_167588.known	chr6	-	2963	8	FSM	ENSG00000204713.11	ENST00000377199.4	2963	8	0	0	0	0	multi-exon	TRUE	canonical	3	476	junction_5	28.6847751696019	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTTGTTGCTTTCTGGG	NA	False	NA	-1	True	AATAAA	-18	NA	28923985	28903001	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_28904666_28907235_28907263_28908807_28908841_28908972_28909089_28911695_28911719_28920011_28920243_28921891_28921988_28923212
transcript_167594.nic	chr6	-	797	2	ISM	ENSG00000204713.11	ENST00000377199.4	2963	8	2	18960	2	-7186	5prime_fragment	FALSE	canonical	3	560	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGAGTGAAAGATT	NA	False	NA	-3	True	NA	NA	NA	28923983	28921961	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_28921988_28923212
transcript_167602.known	chr6	-	2782	7	FSM	ENSG00000197935.7	ENST00000377179.4	2782	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	3.67045259092421	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTGTGTTCTAGGCACT	NA	False	NA	-13	True	AATAAA	-13	NA	29005315	28994787	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_28996587_28998733_28998839_28999486_28999614_28999955_29000048_29003512_29003595_29003945_29004215_29005007
transcript_167606.known	chr6	-	4525	23	FSM	ENSG00000204681.11	ENST00000377034.9	4525	23	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_19	66.0219879476677	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCGGCACCTTGCAGTC	NA	False	NA	-11	True	AATAAA	-14	NA	29633183	29602237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_29603717_29604493_29604638_29604859_29604989_29605568_29605697_29606390_29606485_29606896_29607005_29607101_29607219_29608600_29608734_29609228_29609380_29610923_29611002_29612550_29612615_29613242_29613486_29621100_29621293_29621751_29621818_29622103_29622206_29623304_29623476_29623889_29624025_29627485_29627647_29629086_29629108_29630457_29630644_29631395_29631600_29632300_29632386_29632849
transcript_167607.known	chr6	-	4299	22	FSM	ENSG00000204681.11	ENST00000377016.8	4299	22	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_9	61.6165451762413	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGCAGTCTTCCTGTG	NA	False	NA	-3	True	AATAAA	-22	NA	29633135	29602229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_29603717_29604493_29604638_29604859_29604989_29605568_29605697_29606390_29606485_29606896_29607005_29607101_29607219_29608600_29608734_29609228_29609380_29610923_29611002_29612550_29612615_29613242_29613486_29621100_29621293_29621751_29621818_29622103_29622206_29623304_29623476_29623889_29624025_29627485_29627647_29629086_29629108_29631395_29631600_29632300_29632386_29632849
transcript_167610.nic	chr6	-	4222	21	NIC	ENSG00000204681.11	novel	4525	23	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_18	50.5255133571149	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCGGCACCTTGCAGTC	NA	False	NA	-11	True	AATAAA	-14	NA	29633217	29602237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_29603717_29604493_29604638_29604859_29604989_29605568_29605697_29606390_29606485_29606896_29607005_29607101_29607219_29608600_29608734_29610923_29611002_29612550_29612615_29613242_29613486_29621100_29621293_29621751_29621818_29622103_29622206_29623304_29623476_29623889_29624025_29627485_29627647_29629086_29629108_29631395_29631600_29632300_29632386_29632849
transcript_167613.nic	chr6	-	3979	20	NIC	ENSG00000204681.11	novel	4212	23	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_18	45.6499993173399	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCGGCACCTTGCAGTC	-29631847	False	NA	-11	True	AATAAA	-14	NA	29632510	29602237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_29603717_29604493_29604638_29604859_29604989_29605568_29605697_29606390_29606485_29606896_29607005_29607101_29607219_29608600_29608734_29610923_29611002_29612550_29612615_29613242_29613486_29621100_29621293_29621751_29621818_29622103_29622206_29623304_29623476_29623889_29624025_29627485_29627647_29629086_29629108_29631395_29631600_29632300
transcript_167616.known	chr6	-	4104	18	FSM	ENSG00000204681.11	ENST00000377012.8	4104	18	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_9	54.3000761500036	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGCACCTTGCAGTCTTC	-29627389	False	NA	-8	True	AATAAA	-17	NA	29628052	29602234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_29603717_29604493_29604638_29604859_29604989_29605568_29605697_29606390_29606485_29606896_29607005_29607101_29607219_29608600_29608734_29609228_29609380_29610923_29611002_29612550_29612615_29613242_29613486_29621100_29621293_29621751_29621818_29622103_29622206_29623304_29623476_29623889_29624025_29627485
transcript_167618.nic	chr6	-	3944	17	ISM	ENSG00000204681.11	ENST00000472823.5	4286	21	5085	10	6	0	3prime_fragment	FALSE	canonical	3	131	junction_13	25.4016947023225	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCGGCACCTTGCAGTC	-29627383	False	NA	-11	True	AATAAA	-14	NA	29628046	29602237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_29603717_29604493_29604638_29604859_29604989_29605568_29605697_29606390_29606485_29606896_29607005_29607101_29607219_29608600_29608734_29610923_29611002_29612550_29612615_29613242_29613486_29621100_29621293_29621751_29621818_29622103_29622206_29623304_29623476_29623889_29624025_29627485
transcript_16762.nic	chr1	+	3031	5	ISM	ENSG00000143157.12	ENST00000367876.9	5751	6	-6	4887	-6	2264	5prime_fragment	FALSE	canonical	3	149	junction_1	18.7683243791235	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTGCGTATCTAGGACTCT	166836628	True	NA	NA	False	AATAAA	-2	NA	166839468	166851472	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_166839605_166840954_166841089_166846611_166846739_166847493_166847593_166848937
transcript_167623.nnic	chr6	-	3811	16	NIC	ENSG00000204681.11	novel	4212	23	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_7	47.8007903235454	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCGGCACCTTGCAGTC	-29627383	False	NA	-11	True	AATAAA	-14	NA	29628046	29602237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_29603717_29604493_29604638_29604859_29604989_29605568_29605697_29606390_29606485_29606896_29607005_29607101_29607219_29610923_29611002_29612550_29612615_29613242_29613486_29621100_29621293_29621751_29621818_29622103_29622206_29623304_29623476_29623889_29624025_29627485
transcript_167631.known	chr6	-	2082	5	FSM	ENSG00000204644.10	ENST00000376883.2	2082	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	8.38152730712011	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTCTTTGTGTTTAGT	NA	False	NA	-4	True	AATAAA	-17	NA	29681152	29672482	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_29673759_29675385_29675488_29675932_29676060_29676880_29677367_29681061
transcript_167633.known	chr6	-	1599	4	FSM	ENSG00000204644.10	ENST00000488757.6	1599	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	9.80929264637478	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTCTTTGTGTTTAGT	NA	False	NA	-4	True	AATAAA	-17	NA	29681155	29672482	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_29673759_29675385_29675488_29675932_29676060_29681061
transcript_167637.known	chr6	+	1283	7	FSM	ENSG00000204642.14	ENST00000334668.8	1283	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	2.91070819942883	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGTAGATATGTTTTTAT	NA	False	NA	15	True	AATAAA	-27	NA	29723339	29726525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_29723528_29723657_29723928_29724172_29724449_29725030_29725307_29725446_29725564_29726010_29726044_29726402
transcript_167638.nic	chr6	+	1352	6	NIC	ENSG00000204642.14	novel	1283	7	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_4	2.78567765543682	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGTAGATATGTTTTTAT	29723234	True	NA	15	True	AATAAA	-27	NA	29723400	29726525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_29723928_29724172_29724449_29725030_29725307_29725446_29725564_29726010_29726044_29726402
transcript_167639.known	chr6	+	1319	7	FSM	ENSG00000204632.13	ENST00000360323.11	1319	7	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_2	2.21108319357027	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACTTTTTCAAATTATTT	NA	False	NA	-92	True	ATTAAA	-20	NA	29827824	29831021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_29827918_29828046_29828317_29828542_29828819_29829417_29829694_29829815_29829933_29830377_29830411_29830767
transcript_167661.known	chr6	+	1535	8	FSM	ENSG00000206503.13	ENST00000376809.10	1535	8	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_6	121.297744649861	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCCAGAGTCCACGTGTT	29942301	True	NA	13	True	AATAAA	-16	NA	29942531	29945870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_29942627_29942756_29943027_29943267_29943544_29944121_29944398_29944499_29944617_29945058_29945092_29945233_29945282_29945450
transcript_167668.known	chr6	+	1766	7	FSM	ENSG00000206503.13	ENST00000495183.5	1766	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	160.803883314082	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTTCTTGTGCTGATTT	29942321	False	NA	27	True	AATAAA	-30	NA	29942551	29945884	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_29942627_29942756_29943544_29944121_29944398_29944499_29944617_29945062_29945092_29945233_29945282_29945450
transcript_167670.known	chr6	+	1334	6	FSM	ENSG00000206503.13	ENST00000479320.5	1334	6	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_5	113.429449438847	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAGCTTGGAGGACCTA	29942323	False	NA	NA	False	NA	NA	NA	29942553	29945281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_29942627_29942756_29943544_29944121_29944398_29944499_29944617_29945058_29945092_29945233
transcript_167679.known	chr6	+	754	5	FSM	ENSG00000066379.15	ENST00000376785.2	754	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	143.49455564585	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATGTTACTTATAATC	30059845	True	NA	38	True	ATTAAA	-28	NA	30061262	30064909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30061414_30061514_30061670_30061916_30062018_30062223_30062334_30064672
transcript_167681.nnic	chr6	+	798	5	NNC	ENSG00000066379.15	novel	851	4	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_1	141.336477952438	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATGTATGTTACTTATAA	NA	False	NA	36	True	ATTAAA	-26	NA	30061237	30064907	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_30061435_30061514_30061670_30061916_30062018_30062223_30062334_30064672
transcript_167682.known	chr6	+	736	5	FSM	ENSG00000066379.15	ENST00000376782.6	736	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	146.516210707212	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATGTTACTTATAATC	30059839	True	NA	38	True	ATTAAA	-28	NA	30061256	30064909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30061390_30061514_30061670_30061916_30062018_30062223_30062334_30064672
transcript_167684.known	chr6	+	851	4	FSM	ENSG00000066379.15	ENST00000332435.10	851	4	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_1	13.1993265821489	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATGTATGTTACTTATAA	30059847	True	NA	36	True	ATTAAA	-26	NA	30061264	30064907	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30061670_30061916_30062018_30062223_30062334_30064672
transcript_167689.known	chr6	+	571	4	FSM	ENSG00000066379.15	ENST00000463141.1	571	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	148.460993754813	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATGTTACTTATAATC	30059912	True	NA	38	True	ATTAAA	-28	NA	30061329	30064909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30061399_30061514_30061670_30062223_30062334_30064672
transcript_16769.known	chr1	-	2096	8	FSM	ENSG00000152382.6	ENST00000367874.5	2096	8	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_4	45.1595809889999	198	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTTGTTTATTAAACAT	-166871558	True	NA	0	True	AATAAA	-16	NA	166876264	166856509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_166857720_166858118_166858282_166860185_166860338_166862202_166862413_166863823_166863922_166869444_166869511_166869762_166869855_166876159
transcript_167690.known	chr6	-	2084	4	FSM	ENSG00000204618.10	ENST00000244360.8	2084	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	1.4142135623731	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTTGACTGATCTCTGT	NA	False	NA	-9	True	AATAAA	-20	NA	30075769	30070269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30071692_30073156_30073249_30073455_30073479_30075222
transcript_167691.known	chr6	+	1621	3	FSM	ENSG00000204619.8	ENST00000376772.8	1621	3	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_2	33	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTAAATATGGGCCCAT	30067184	False	NA	15	True	AATAAA	-19	NA	30067197	30070333	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30067480_30068589_30068699_30069103
transcript_167693.known	chr6	+	1881	7	FSM	ENSG00000204610.14	ENST00000376694.9	1881	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTATCTTGGGAAAAATC	NA	False	NA	NA	False	AATAAA	-21	NA	30163545	30172693	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30164066_30167175_30167272_30168299_30168531_30169240_30169264_30170500_30170617_30170975_30171009_30171831
transcript_167694.nic	chr6	-	4582	10	NIC	ENSG00000234127.9	novel	3518	10	NA	NA	-1154	0	combination_of_known_junctions	FALSE	canonical	3	87	junction_9	14.8756159743818	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTGGAGATCTGTATTT	NA	False	NA	NA	False	AATAAA	-16	NA	30214581	30184454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_30186559_30189166_30189200_30189417_30189534_30190012_30190036_30196515_30196747_30198428_30198525_30198665_30199154_30201034_30201139_30204655_30204766_30213304
transcript_167695.known	chr6	-	3518	10	FSM	ENSG00000234127.9	ENST00000454678.7	3518	10	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_7	35.4769965463625	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTGGAGATCTGTATTT	-30212009	True	NA	NA	False	AATAAA	-16	NA	30213406	30184454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30186559_30189166_30189200_30189417_30189534_30190012_30190036_30196515_30196747_30198428_30198525_30198665_30199265_30201034_30201139_30204655_30204766_30213304
transcript_167698.known	chr6	-	3318	9	FSM	ENSG00000234127.9	ENST00000453195.5	3318	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_8	31.3446067928759	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTGGAGATCTGTATTT	-30212030	True	NA	NA	False	AATAAA	-16	NA	30213427	30184454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30186559_30189166_30189200_30189417_30189534_30190012_30190036_30196515_30196747_30198428_30198525_30198665_30199154_30201034_30201139_30213304
transcript_167700.known	chr6	-	1124	6	FSM	ENSG00000234127.9	ENST00000416596.5	1124	6	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_5	15.8113883008419	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGCAGAGCTCATGCAG	-30212022	True	NA	NA	False	NA	NA	NA	30213419	30196535	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30196747_30198428_30198525_30198665_30199154_30201034_30201139_30204655_30204766_30213304
transcript_167713.known	chr6	+	3198	9	FSM	ENSG00000204599.15	ENST00000396548.5	3198	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	37.9110801745347	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGTTGTGTGGTAAT	30326519	True	NA	23	True	NA	NA	NA	30326919	30343729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30326996_30327651_30327697_30328908_30329042_30329310_30329771_30330780_30330877_30335744_30335976_30339907_30339931_30340504_30340621_30341711
transcript_16772.known	chr1	+	4170	6	FSM	ENSG00000198842.10	ENST00000361200.7	4170	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	0.489897948556636	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATTAGAAGAAAACCACTT	167094055	True	NA	NA	False	NA	NA	NA	167094074	167129165	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_167094195_167094833_167094960_167113709_167113805_167117327_167117560_167119248_167119467_167125786
transcript_167728.nnic	chr6	-	2461	6	NNC	ENSG00000231074.10	novel	7199	5	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_5	127.76447080468	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGATGAGTAAGGTTGG	NA	False	NA	-14	True	ATTAAA	-15	NA	30326868	30291551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_30292600_30294470_30294965_30296131_30296238_30314268_30314483_30326008_30326093_30326353
transcript_16773.known	chr1	-	682	1	FSM	ENSG00000272205.1	ENST00000606967.1	682	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATCGTGAATTTTATTT	-167220447	True	NA	-4	True	AATAAA	-17	NA	167220512	167219830	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_167219800_167220500
transcript_167730.known	chr6	+	577	5	FSM	ENSG00000241370.6	ENST00000433076.6	577	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	484.013106744022	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTGTTCTGTGGGTAT	30336911	True	NA	21	True	AATAAA	-22	NA	30345130	30346857	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30345229_30345297_30345399_30345466_30345574_30346431_30346558_30346712
transcript_167731.known	chr6	+	522	5	FSM	ENSG00000241370.6	ENST00000436442.2	522	5	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_4	454.514301205144	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTGTTCTGTGGGTAT	30336949	True	NA	21	True	AATAAA	-22	NA	30345168	30346857	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30345229_30345297_30345399_30345490_30345574_30346431_30346565_30346712
transcript_167735.known	chr6	-	4929	5	FSM	ENSG00000231074.10	ENST00000666294.1	4929	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	123.41089903246	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCGAGATCACACCATTGC	NA	False	NA	NA	False	NA	NA	NA	30326871	30286746	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30289495_30291536_30292600_30294470_30294965_30296131_30296238_30326353
transcript_167740.nic	chr6	-	2963	5	NIC	ENSG00000231074.10	novel	7267	5	NA	NA	-23	-2	intron_retention	FALSE	canonical	3	24	junction_4	128.063460830949	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGATGAGTAAGGTTGG	NA	False	NA	-14	True	ATTAAA	-15	NA	30327109	30291551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_30292600_30294470_30294965_30296131_30296238_30314268_30314483_30326008
transcript_167741.known	chr6	-	7267	5	FSM	ENSG00000231074.10	ENST00000664861.1	7267	5	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_4	132.816367590745	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTTGGGAGGCCAAGGC	NA	False	NA	NA	False	AATACA	-39	NA	30326809	30286805	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30292600_30294470_30294965_30296131_30296238_30314268_30314483_30326150
transcript_167742.known	chr6	-	7199	5	FSM	ENSG00000231074.10	ENST00000653541.1	7199	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	124.340258967078	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCTAGCCTGGTGAAGGA	NA	False	NA	NA	False	NA	NA	NA	30326866	30286727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30292600_30294470_30294965_30296131_30296238_30314268_30314483_30326353
transcript_167745.nnic	chr6	-	2513	5	NNC	ENSG00000231074.10	novel	4929	5	NA	NA	16	-2	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_4	118.725260580889	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGATGAGTAAGGTTGG	NA	False	NA	-14	True	ATTAAA	-15	NA	30327134	30291551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_30292600_30294470_30294965_30296131_30296238_30326008_30326093_30326353
transcript_167748.known	chr6	+	621	4	FSM	ENSG00000241370.6	ENST00000473266.1	621	4	0	0	0	0	multi-exon	FALSE	canonical	3	1084	junction_1	51.6333225737023	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTGTTCTGTGGGTAT	30336935	True	NA	21	True	AATAAA	-22	NA	30345154	30346857	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30345229_30345297_30345574_30346431_30346558_30346712
transcript_167750.known	chr6	-	3898	4	FSM	ENSG00000231074.10	ENST00000665953.1	3898	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	123.215258795329	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	30326846	30286689	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30289495_30294470_30294965_30296131_30296238_30326353
transcript_167756.nic	chr6	-	2782	4	NIC	ENSG00000231074.10	novel	7230	4	NA	NA	8	-2	intron_retention	FALSE	canonical	3	99	junction_3	91.0384534139283	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGATGAGTAAGGTTGG	NA	False	NA	-14	True	ATTAAA	-15	NA	30327142	30291551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_30292600_30294470_30294965_30296131_30296238_30326008
transcript_167757.known	chr6	-	6734	4	FSM	ENSG00000231074.10	ENST00000668974.1	6734	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	116.378692207809	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTTGGGAGGCCAAGGC	NA	False	NA	NA	False	AATACA	-39	NA	30326490	30286805	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30292600_30294470_30294965_30296131_30296238_30326150
transcript_167758.known	chr6	-	7230	4	FSM	ENSG00000231074.10	ENST00000659132.1	7230	4	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_3	86.821656284593	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTCCATCTCAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30327086	30286702	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30292600_30294470_30294965_30296131_30296238_30326353
transcript_167759.known	chr6	-	4601	4	FSM	ENSG00000231074.10	ENST00000602290.2	4601	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	122.633147594314	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTATTGTACAAAGCTG	NA	False	NA	NA	False	NA	NA	NA	30326868	30291198	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30294965_30296131_30296238_30314268_30314483_30326353
transcript_167761.known	chr6	-	4605	4	FSM	ENSG00000231074.10	ENST00000444126.5	4605	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	126.24579200908	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATTGGGGATTTTTTAAA	-30325902	False	NA	NA	False	NA	NA	NA	30326334	30291005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30294965_30296131_30296238_30314268_30314483_30326008
transcript_167765.known	chr6	-	1633	3	FSM	ENSG00000231074.10	ENST00000412685.8	1963	3	318	12	-48	-6	multi-exon	FALSE	canonical	1	5	junction_1	51.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGTAAACTGTATACTAACA	NA	False	NA	NA	False	NA	NA	NA	30326538	30291257	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30292600_30296131_30296238_30326353
transcript_167766.known	chr6	-	4433	3	FSM	ENSG00000231074.10	ENST00000454129.5	4433	3	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	102	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATTGGGGATTTTTTAAA	-30325944	True	NA	NA	False	NA	NA	NA	30326376	30291005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30294965_30296131_30296238_30326008
transcript_167767.known	chr6	-	4518	3	FSM	ENSG00000231074.10	ENST00000449544.6	4518	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	129	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTATCCAAAGTTTGTCAC	-30325963	True	NA	-24	True	NA	NA	NA	30326395	30290797	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30294965_30296131_30296238_30326150
transcript_167768.known	chr6	-	5050	3	FSM	ENSG00000231074.10	ENST00000426882.6	5050	3	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_2	97.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTAGAAACAATGTTAAAA	NA	False	NA	-44	True	NA	NA	NA	30327150	30290817	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30294965_30296131_30296238_30326353
transcript_167784.known	chr6	+	3249	8	FSM	ENSG00000204599.15	ENST00000396551.8	3624	8	375	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	25.8449063390346	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGTTGTGTGGTAAT	NA	False	NA	23	True	NA	NA	NA	30326843	30343729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30326996_30328888_30329042_30329310_30329771_30330780_30330877_30335744_30335976_30339907_30339931_30340504_30340621_30341711
transcript_167785.known	chr6	+	594	4	FSM	ENSG00000241370.6	ENST00000428040.6	594	4	0	0	0	0	multi-exon	FALSE	canonical	3	1120	junction_3	40.5490101262931	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTGTTCTGTGGGTAT	30336939	True	NA	21	True	AATAAA	-22	NA	30345158	30346857	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30345399_30345490_30345574_30346431_30346558_30346712
transcript_167788.known	chr6	+	2548	8	FSM	ENSG00000204592.9	ENST00000376630.5	2548	8	0	0	0	0	multi-exon	TRUE	canonical	3	192	junction_2	17.3075422983208	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTATTTCATTTGTGCGT	30485494	True	NA	22	True	AATAAA	-19	NA	30489508	30494194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30489596_30489725_30489996_30490239_30490516_30491136_30491413_30491536_30491654_30492403_30492437_30492540_30492584_30492748
transcript_16779.known	chr1	+	13937	17	FSM	ENSG00000143190.23	ENST00000541643.7	13937	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	17.933906434461	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAGTTTCTTTGAAATTG	167217802	True	NA	34	True	ATTAAA	-26	NA	167220897	167427345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_167220959_167303473_167303575_167332469_167332536_167365466_167365568_167370160_167370215_167371916_167372037_167374107_167374297_167376028_167376156_167383856_167383952_167389587_167389762_167396285_167396428_167397993_167398134_167399185_167399366_167401450_167401557_167411958_167412305_167413025_167413115_167415499
transcript_167793.nic	chr6	+	1961	7	NIC	ENSG00000204592.9	novel	2548	8	NA	NA	-42	-873	intron_retention	TRUE	canonical	3	192	junction_2	16.2035661369822	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCTGGATCTCAATTTAA	30485452	True	NA	2	True	AATAAA	-19	NA	30489466	30493321	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_30489596_30489725_30490516_30491136_30491413_30491536_30491654_30492403_30492437_30492540_30492584_30492748
transcript_167794.nic	chr6	+	2834	7	NIC	ENSG00000204592.9	novel	2548	8	NA	NA	-42	0	intron_retention	FALSE	canonical	3	192	junction_2	16.2035661369822	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTATTTCATTTGTGCGT	30485452	True	NA	22	True	AATAAA	-19	NA	30489466	30494194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_30489596_30489725_30490516_30491136_30491413_30491536_30491654_30492403_30492437_30492540_30492584_30492748
transcript_16781.known	chr1	+	13843	16	FSM	ENSG00000143190.23	ENST00000367866.7	13843	16	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	10.8791339524594	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTGGAGTTTCTTTGA	167217790	True	NA	29	True	ATTAAA	-21	NA	167220885	167427340	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_167220959_167332469_167332536_167365466_167365568_167370160_167370215_167371916_167372037_167374107_167374297_167376028_167376156_167383856_167383952_167389587_167389762_167396285_167396428_167397993_167398134_167399185_167399366_167401450_167401557_167411958_167412305_167413025_167413115_167415499
transcript_167811.known	chr6	+	2005	5	FSM	ENSG00000204576.12	ENST00000498336.5	2005	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	9.836157786453	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTTCTAGTCATCT	30556670	True	NA	78	True	AATAAA	-28	NA	30557315	30563723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30557451_30558149_30558213_30561327_30561509_30561833_30562125_30562388
transcript_167813.known	chr6	+	1845	4	FSM	ENSG00000204576.12	ENST00000376560.8	1845	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	12.328828005938	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTTCTAGTCATCT	NA	False	NA	78	True	AATAAA	-28	NA	30557294	30563723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30557451_30558149_30558213_30561833_30562125_30562388
transcript_167814.known	chr6	+	1944	4	FSM	ENSG00000204576.12	ENST00000481741.5	1944	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	5.43650214343336	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTTCTAGTCATCT	30556668	True	NA	78	True	AATAAA	-28	NA	30557313	30563723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30557451_30561327_30561509_30561833_30562125_30562388
transcript_167816.known	chr6	+	1797	3	FSM	ENSG00000204576.12	ENST00000376557.3	1797	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	14.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTTCTAGTCATCT	NA	False	NA	78	True	AATAAA	-28	NA	30557279	30563723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30557451_30561833_30562125_30562388
transcript_167819.known	chr6	+	3426	25	FSM	ENSG00000204574.14	ENST00000441867.6	3426	25	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_3	92.285101346618	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGGAACATGGGTCTC	NA	False	NA	3	True	AAAAAG	-20	NA	30571423	30591522	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30571561_30577408_30577456_30577817_30577914_30578072_30578203_30578347_30578386_30578469_30578578_30579930_30580006_30580405_30580520_30582393_30582508_30583065_30583189_30583607_30583709_30583804_30583891_30584191_30584332_30584417_30584567_30585259_30585344_30585557_30585683_30585878_30585992_30586133_30586306_30586473_30586549_30586640_30586712_30589687_30589721_30589805_30589975_30590148_30590214_30590305_30590379_30590534
transcript_167821.known	chr6	+	3405	25	FSM	ENSG00000204574.14	ENST00000326195.13	3405	25	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_3	92.1285334012578	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGGAACATGGGTCTC	30570057	True	NA	3	True	AAAAAG	-20	NA	30571441	30591522	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30571561_30577408_30577456_30577817_30577914_30578075_30578203_30578347_30578386_30578469_30578578_30579930_30580006_30580405_30580520_30582393_30582508_30583065_30583189_30583607_30583709_30583804_30583891_30584191_30584332_30584417_30584567_30585259_30585344_30585557_30585683_30585878_30585992_30586133_30586306_30586473_30586549_30586640_30586712_30589687_30589721_30589805_30589975_30590148_30590214_30590305_30590379_30590534
transcript_167830.nic	chr6	+	825	9	ISM	ENSG00000204574.14	ENST00000441867.6	3426	25	9	9040	-9	2034	5prime_fragment	FALSE	canonical	3	298	junction_3	115.172696417163	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAGAAGAAAAAGCTGAAAA	30570048	True	NA	85	True	NA	NA	NA	30571432	30582482	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_30571561_30577408_30577456_30577817_30577914_30578072_30578203_30578347_30578386_30578469_30578578_30579930_30580006_30580405_30580520_30582393
transcript_167831.nic	chr6	+	804	9	ISM	ENSG00000204574.14	ENST00000326195.13	3405	25	9	9040	9	2034	5prime_fragment	FALSE	canonical	3	299	junction_3	114.852554934577	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAGAAGAAAAAGCTGAAAA	30570066	True	NA	85	True	NA	NA	NA	30571450	30582482	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_30571561_30577408_30577456_30577817_30577914_30578075_30578203_30578347_30578386_30578469_30578578_30579930_30580006_30580405_30580520_30582393
transcript_167832.nic	chr6	+	721	8	ISM	ENSG00000204574.14	ENST00000441867.6	3426	25	-47	11074	-16	0	5prime_fragment	FALSE	canonical	3	298	junction_3	122.485984204441	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAGAAGAAATTATAAAG	NA	False	NA	NA	False	AATAAA	-32	NA	30571376	30580448	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_30571561_30577408_30577456_30577817_30577914_30578072_30578203_30578347_30578386_30578469_30578578_30579930_30580006_30580405
transcript_167833.nic	chr6	+	729	8	ISM	ENSG00000204574.14	ENST00000441867.6	3426	25	16	11003	-2	71	5prime_fragment	FALSE	canonical	3	298	junction_3	122.485984204441	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTATTTGGTGTTGGGG	30570055	True	NA	NA	False	NA	NA	NA	30571439	30580519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_30571561_30577408_30577456_30577817_30577914_30578072_30578203_30578347_30578386_30578469_30578578_30579930_30580006_30580405
transcript_167834.nic	chr6	+	662	8	ISM	ENSG00000204574.14	ENST00000376545.7	3131	24	40	10865	-9	0	5prime_fragment	FALSE	canonical	3	299	junction_3	122.147117720178	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAGAAGAAATTATAAAG	30570048	True	NA	NA	False	AATAAA	-32	NA	30571432	30580448	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_30571561_30577408_30577456_30577817_30577914_30578075_30578203_30578347_30578386_30578469_30578578_30579930_30580006_30580405
transcript_167835.nic	chr6	+	730	8	ISM	ENSG00000204574.14	ENST00000376545.7	3131	24	43	10794	-6	71	5prime_fragment	FALSE	canonical	3	299	junction_3	122.147117720178	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTATTTGGTGTTGGGG	30570051	True	NA	NA	False	NA	NA	NA	30571435	30580519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_30571561_30577408_30577456_30577817_30577914_30578075_30578203_30578347_30578386_30578469_30578578_30579930_30580006_30580405
transcript_167836.nic	chr6	+	644	7	ISM	ENSG00000204574.14	ENST00000441867.6	3426	25	-47	11551	-16	-477	5prime_fragment	FALSE	canonical	3	298	junction_3	132.268245958313	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAAAGGAAGAGAAGTCAA	NA	False	NA	8	True	NA	NA	NA	30571376	30579971	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_30571561_30577408_30577456_30577817_30577914_30578072_30578203_30578347_30578386_30578469_30578578_30579930
transcript_167839.nic	chr6	+	576	7	ISM	ENSG00000204574.14	ENST00000376545.7	3131	24	49	11342	0	-477	5prime_fragment	FALSE	canonical	3	299	junction_3	131.90074130025	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAAAGGAAGAGAAGTCAA	30570057	True	NA	8	True	NA	NA	NA	30571441	30579971	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_30571561_30577408_30577456_30577817_30577914_30578075_30578203_30578347_30578386_30578469_30578578_30579930
transcript_167844.nic	chr6	+	274	3	ISM	ENSG00000204574.14	ENST00000376545.7	3131	24	37	13400	6	-581	5prime_fragment	FALSE	canonical	3	649	junction_2	2.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAAGTGCCACAGGGCCC	30570045	True	NA	3	True	NA	NA	NA	30571429	30577913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_30571561_30577408_30577456_30577817
transcript_167845.known	chr6	+	606	7	FSM	ENSG00000204574.14	ENST00000468958.1	606	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	240.783962644248	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAGAAGAAATTATAAAG	30570057	True	NA	NA	False	AATAAA	-32	NA	30571441	30580448	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30571561_30577817_30577914_30578075_30578203_30578347_30578386_30578469_30578578_30579930_30580006_30580405
transcript_167850.known	chr6	-	4511	20	FSM	ENSG00000204569.10	ENST00000376511.7	4511	20	0	0	0	0	multi-exon	TRUE	canonical	3	143	junction_16	37.6854601380582	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCTTATTTAACCCCTAG	-30610564	True	NA	-14	True	AATAAA	-15	NA	30617243	30600412	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30601659_30601935_30602692_30602845_30602960_30603209_30603286_30603471_30603667_30603779_30603844_30604007_30604255_30604352_30604512_30604587_30604736_30604993_30605095_30605922_30606036_30606137_30606244_30606467_30606642_30606778_30606857_30607839_30607892_30608778_30608915_30609076_30609164_30609837_30609956_30616477_30616999_30617223
transcript_167857.nic	chr6	-	1485	11	ISM	ENSG00000204569.10	ENST00000376511.7	4511	20	-3	4605	-2	0	5prime_fragment	FALSE	canonical	3	143	junction_7	28.1973403001063	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGTCACCTACGGCTGC	-30610567	True	NA	17	True	AAGAAA	-7	NA	30617246	30605017	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_30605095_30605922_30606036_30606137_30606244_30606467_30606642_30606778_30606857_30607839_30607892_30608778_30608915_30609076_30609164_30609837_30609956_30616477_30616999_30617223
transcript_167858.nic	chr6	-	1377	10	ISM	ENSG00000204569.10	ENST00000376511.7	4511	20	-3	5541	-2	-145	5prime_fragment	FALSE	canonical	3	143	junction_6	27.3527482989584	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGATCAAAGTGAAGATCAT	-30610567	True	NA	NA	False	AATACA	-33	NA	30617246	30605953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_30606036_30606137_30606244_30606467_30606642_30606778_30606857_30607839_30607892_30608778_30608915_30609076_30609164_30609837_30609956_30616477_30616999_30617223
transcript_167860.known	chr6	+	1398	7	FSM	ENSG00000204568.12	ENST00000259873.5	1398	7	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_3	85.904339561838	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGGGCTGTTTCCGAT	30609801	True	NA	25	True	AATAAA	-19	NA	30617839	30626392	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30617944_30619492_30619602_30619708_30619807_30619920_30619990_30622831_30622899_30624882_30624943_30625501
transcript_167865.nnic	chr6	+	1049	6	NIC	ENSG00000204568.12	novel	1398	7	NA	NA	1	-281	combination_of_known_splicesites	FALSE	canonical	3	40	junction_4	347.610471648942	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTGGGAAGAGAGCTAGAG	30609802	True	NA	40	True	NA	NA	NA	30617840	30626111	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_30617944_30619492_30619602_30619708_30619807_30619920_30619990_30624882_30624943_30625501
transcript_167871.known	chr6	+	1476	13	FSM	ENSG00000137343.18	ENST00000376485.8	1476	13	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_10	48.5771865751358	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTTGAAAAATTTGACTC	30626844	False	NA	15	True	AATAAA	-23	NA	30626855	30646823	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30642767_30643012_30645894_30645975_30646066_30646110_30646468
transcript_167872.known	chr6	+	1195	12	FSM	ENSG00000137343.18	ENST00000468713.5	1195	12	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_9	58.1546811714135	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTTGAAAAATTTGACTC	30626869	True	NA	15	True	AATAAA	-23	NA	30626892	30646823	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30645894_30645975_30646066_30646110_30646468
transcript_167873.nic	chr6	+	1411	12	NIC	ENSG00000137343.18	novel	1476	13	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_7	55.9144860663685	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTGTTGAAAAATTTGAC	30626838	False	NA	13	True	AATAAA	-21	NA	30626849	30646821	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30642175_30642248_30642767_30643012_30645894_30645975_30646066_30646110_30646468
transcript_167875.known	chr6	+	1527	11	FSM	ENSG00000137343.18	ENST00000471782.5	1527	11	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_9	59.1236839176992	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTTGAAAAATTTGACTC	30626896	False	NA	15	True	AATAAA	-23	NA	30626919	30646823	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30645894_30645975_30646066
transcript_167879.known	chr6	+	2646	10	FSM	ENSG00000137343.18	ENST00000376483.8	2646	10	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_8	45.7815532423699	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCAGCCTCATTTGTGC	30626852	True	NA	NA	False	AAAAAG	-17	NA	30626875	30644679	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30642767
transcript_167884.known	chr6	+	2611	9	FSM	ENSG00000137343.18	ENST00000318999.11	2611	9	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_7	55.578772926361	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCAGCCTCATTTGTGC	30626830	False	NA	NA	False	AAAAAG	-17	NA	30626841	30644679	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30642175_30642248_30642767
transcript_167886.known	chr6	+	718	8	FSM	ENSG00000137343.18	ENST00000493388.5	718	8	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_7	36.3845672599507	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTCTAAAGCAACCCAAG	30626891	False	NA	NA	False	NA	NA	NA	30626914	30640698	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534
transcript_167889.known	chr6	+	2119	11	FSM	ENSG00000137343.18	ENST00000329992.12	2119	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_10	66.3554820644082	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCAGCCTCATTTGTGC	30626862	True	NA	NA	False	AAAAAG	-17	NA	30626885	30644679	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30642767_30643012_30643528
transcript_16789.nic	chr1	+	1550	12	ISM	ENSG00000143190.23	ENST00000367866.7	13843	16	-163	28049	-153	2466	5prime_fragment	FALSE	canonical	3	26	junction_7	9.87274401471877	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCAACCCACCAAGCAGT	167220711	False	NA	NA	False	AAGAAA	-4	NA	167220722	167399291	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_167220959_167332469_167332536_167365466_167365568_167370160_167370215_167371916_167372037_167374107_167374297_167376028_167376156_167383856_167383952_167389587_167389762_167396285_167396428_167397993_167398134_167399185
transcript_167896.known	chr6	-	3406	20	FSM	ENSG00000204560.10	ENST00000376442.8	3406	20	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_19	28.1977583046455	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTGATATGTGAAATTC	-30672877	True	NA	-21	True	AATAAA	-44	NA	30673006	30653126	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30653371_30654705_30654880_30655174_30655337_30655434_30655598_30656197_30656266_30656390_30656510_30656596_30656760_30656951_30657093_30659471_30659625_30659735_30659835_30660031_30660243_30662626_30662743_30662910_30663022_30664800_30664993_30665070_30665275_30665478_30665734_30670409_30670467_30670789_30670953_30671035_30671275_30672634
transcript_167897.nic	chr6	-	3104	20	NIC	ENSG00000204560.10	novel	3406	20	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_19	55.5244948566475	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTGATATGTGAAATTC	-30672896	True	NA	-21	True	AATAAA	-44	NA	30673025	30653126	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_30653371_30654705_30654880_30655174_30655337_30655434_30655598_30656197_30656266_30656390_30656510_30656596_30656760_30656951_30657093_30659471_30659625_30659735_30659835_30660031_30660243_30662626_30662743_30662910_30663022_30664800_30664993_30665070_30665275_30665478_30665734_30670409_30670467_30670789_30670953_30671035_30671275_30672955
transcript_167916.known	chr6	+	1402	6	FSM	ENSG00000204564.12	ENST00000376473.9	1402	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	25.822470834527	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGTCAGGTTCTGTTT	NA	False	NA	12	True	ATTAAA	-22	NA	30647072	30653210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30647304_30649557_30649960_30650993_30651083_30651265_30651467_30652647_30652718_30652801
transcript_167917.known	chr6	+	1496	6	FSM	ENSG00000204564.12	ENST00000446773.6	1496	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	30.017328328817	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACATATCACTTTCTCT	NA	False	NA	26	True	AATAAA	-26	NA	30647420	30653109	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30647847_30649557_30649960_30650993_30651083_30651265_30651467_30652647_30652718_30652801
transcript_167925.nic	chr6	-	644	2	ISM	ENSG00000204560.10	ENST00000376442.8	3406	20	-50	17926	-50	-5923	5prime_fragment	FALSE	canonical	3	198	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAAGAAGAAAACAGGGTA	NA	False	NA	-16	True	NA	NA	NA	30673056	30671052	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_30671275_30672634
transcript_167928.known	chr6	-	2853	4	FSM	ENSG00000146112.12	ENST00000399199.7	2853	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	22.8619042659763	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTCTGCTTCTCCTTCTT	-30686529	False	687	-5	True	AATAAA	-17	NA	30687216	30676388	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30677289_30679178_30679390_30684407_30686047_30687113
transcript_167930.known	chr6	-	1156	3	FSM	ENSG00000146112.12	ENST00000467662.5	1156	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	26	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTCTGCTTCTCCTTCTT	-30686471	False	687	-5	True	AATAAA	-17	NA	30687158	30676388	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30677289_30679178_30679390_30687113
transcript_167932.known	chr6	-	1328	4	FSM	ENSG00000146112.12	ENST00000488324.1	1328	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	22.8619042659763	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTCTGCTTCTCCTTCTT	-30686506	False	687	-5	True	AATAAA	-17	NA	30687193	30676388	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30677289_30679178_30679390_30684407_30684545_30687113
transcript_167933.known	chr6	-	1029	2	FSM	ENSG00000137404.15	ENST00000474864.5	1029	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATGCAGTCTGTCAGTG	-30690287	True	NA	-8	True	AATAAA	-21	NA	30690974	30688046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30688943_30690841
transcript_167934.known	chr6	-	1228	3	FSM	ENSG00000137404.15	ENST00000376420.9	1228	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	35	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATGCAGTCTGTCAGTG	-30690289	True	NA	-8	True	AATAAA	-21	NA	30690976	30688046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30688943_30690046_30690244_30690841
transcript_167935.known	chr6	-	1453	4	FSM	ENSG00000137404.15	ENST00000470733.1	1453	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	31.2018517968975	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATGCAGTCTGTCAGTG	NA	False	NA	-8	True	AATAAA	-21	NA	30691002	30688046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30688943_30689275_30689453_30690024_30690244_30690841
transcript_16794.known	chr1	-	1078	6	FSM	ENSG00000198821.11	ENST00000470379.1	1078	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.46969384566991	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGATGGAAAGGAGCCTAG	-167439546	True	NA	NA	False	NA	NA	NA	167439640	167431172	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_167431747_167433023_167433060_167434019_167434077_167435398_167435432_167438569_167438651_167439343
transcript_167945.known	chr6	+	2624	4	FSM	ENSG00000196230.14	ENST00000681435.1	2624	4	0	0	0	0	multi-exon	FALSE	canonical	2	446	junction_1	4953.72602750249	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCAACCAACTGGATATT	NA	False	NA	148	True	NA	NA	NA	30717434	30725538	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30717640_30722536_30722646_30722917_30723029_30723339
transcript_167947.known	chr6	+	2632	4	FSM	ENSG00000196230.14	ENST00000330914.7	2632	4	0	0	0	0	multi-exon	FALSE	canonical	3	867	junction_1	4755.32256178975	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGATGTGTGCTTATTTAG	30721022	False	NA	36	True	AATAAA	-20	NA	30721573	30725426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30721899_30722536_30722646_30722917_30723029_30723339
transcript_167949.known	chr6	+	2823	4	FSM	ENSG00000196230.14	ENST00000396384.1	2823	4	0	0	0	0	multi-exon	FALSE	canonical	2	859	junction_1	4759.09265395084	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGATGTGTGCTTATTTAG	30721147	False	NA	36	True	AATAAA	-20	NA	30721698	30725426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30722215_30722536_30722646_30722917_30723029_30723339
transcript_16795.known	chr1	-	1074	6	FSM	ENSG00000198821.11	ENST00000476733.5	1074	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	1.72046505340853	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCTAGGCCAGGTGCAAC	-167439527	True	NA	NA	False	NA	NA	NA	167439621	167431160	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_167431747_167433023_167433060_167434019_167434077_167435398_167435435_167438569_167438651_167439343
transcript_167950.known	chr6	+	2903	4	FSM	ENSG00000196230.14	ENST00000396389.5	2903	4	0	0	0	0	multi-exon	FALSE	canonical	1	226	junction_1	5057.40660374026	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGATGTGTGCTTATTTAG	30721115	False	NA	36	True	AATAAA	-20	NA	30721666	30725426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30722263_30722536_30722646_30722917_30723029_30723339
transcript_167953.known	chr6	+	2515	4	FSM	ENSG00000196230.14	ENST00000327892.13	2515	4	0	0	0	0	multi-exon	FALSE	canonical	3	10808	junction_2	550.255900064284	10449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCGAGATGTGTGCTTAT	NA	False	NA	32	True	AATAAA	-16	NA	30720351	30725422	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30720564_30722536_30722646_30722917_30723029_30723339
transcript_167954.known	chr6	+	3209	3	FSM	ENSG00000196230.14	ENST00000680530.1	3209	3	0	0	0	0	multi-exon	FALSE	canonical	3	10808	junction_1	143.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATTGAAAAAAGCTGCGA	30721066	False	NA	19	True	AATAAA	-3	NA	30721617	30725409	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30722646_30722917_30723029_30723339
transcript_167958.known	chr6	-	1866	13	FSM	ENSG00000137312.15	ENST00000376389.8	1866	13	0	0	0	0	multi-exon	FALSE	canonical	3	523	junction_9	87.1066954308846	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCCCGGCACAGTGG	-30742662	False	NA	-13	True	AATAAA	-22	NA	30742687	30727708	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30728146_30730021_30730187_30730427_30730566_30730681_30730728_30730918_30731101_30740157_30740311_30740495_30740592_30740678_30740799_30741189_30741334_30741613_30741705_30741791_30741868_30742146_30742204_30742526
transcript_16796.known	chr1	-	1969	4	FSM	ENSG00000143162.9	ENST00000370509.5	1969	4	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_2	27.3780122645081	147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGGATTCGTTTTCTT	-167549402	True	NA	NA	False	ATTAAA	-19	NA	167553762	167541012	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_167542302_167546100_167546286_167548001_167548122_167553387
transcript_167963.nic	chr6	-	1649	13	NIC	ENSG00000137312.15	novel	1866	13	NA	NA	-7	-121	combination_of_known_junctions	FALSE	canonical	3	84	junction_12	196.581390410068	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTTGTCTAGAATATTT	-30740334	True	NA	-15	True	ATTAAA	-14	NA	30742531	30727829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_30728146_30730021_30730187_30730427_30730566_30730681_30730728_30730918_30731101_30740157_30740311_30740495_30740592_30740678_30740799_30741189_30741334_30741613_30741705_30741791_30741868_30742146_30742204_30742466
transcript_16797.known	chr1	+	5443	7	FSM	ENSG00000198771.11	ENST00000367854.8	5443	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.372677996249965	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGAATTGATTTCAGAG	167630201	True	NA	NA	False	AATAAA	-19	NA	167630231	167708696	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_167630430_167683899_167684002_167685420_167685511_167690048_167690121_167694098_167694303_167697098_167697843_167704663
transcript_167979.nic	chr6	-	2202	12	NIC	ENSG00000137312.15	novel	1866	13	NA	NA	-132	-121	intron_retention	FALSE	canonical	3	644	junction_11	66.5227233903779	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTTGTCTAGAATATTT	-30742839	False	NA	-15	True	ATTAAA	-14	NA	30742864	30727829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_30728146_30730021_30730187_30730427_30730566_30730681_30730728_30730918_30731101_30740157_30740311_30740495_30740592_30740678_30740799_30741189_30741705_30741791_30741868_30742146_30742204_30742526
transcript_16800.known	chr1	+	4978	6	FSM	ENSG00000197965.12	ENST00000359523.7	4978	6	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_5	70.4812031679369	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACTTAGTAATTTTATAA	167710863	True	NA	16	True	AATAAA	-17	NA	167721981	167791919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_167722243_167765582_167765750_167772274_167772489_167773235_167773369_167776063_167776167_167787819
transcript_168002.known	chr6	-	1237	2	FSM	ENSG00000137331.12	ENST00000259874.6	1237	2	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGAGTGTATCTTTGCA	NA	False	NA	-17	True	AATAAA	-19	NA	30744547	30743198	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30744197_30744308
transcript_168003.known	chr6	-	1350	1	FSM	ENSG00000137331.12	ENST00000376377.2	1350	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGAGTGTATCTTTGCA	NA	False	NA	-17	True	AATAAA	-19	NA	30744548	30743198	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30743200_30744500
transcript_168004.known	chr6	+	527	2	FSM	ENSG00000272273.2	ENST00000607333.2	573	2	0	46	0	-43	multi-exon	FALSE	canonical	3	27	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCCTTGCATAAGTTAAAA	NA	False	NA	-35	True	AATAAA	-40	NA	30742928	30743592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30743097_30743233
transcript_168008.nnic	chr6	-	982	4	NNC	ENSG00000237923.1	novel	799	3	NA	NA	-94	448	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	49.8285950924656	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTTATTTTCAATTTTTT	NA	False	NA	-12	True	AATAAA	-18	NA	30848253	30839077	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_30839464_30839822_30840020_30847036_30847150_30847967
transcript_168009.nnic	chr6	-	839	4	NNC	ENSG00000237923.1	novel	799	3	NA	NA	-161	238	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	49.8285950924656	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGGACTCCAAAAGGCCT	NA	False	NA	NA	False	AAAAAG	-9	NA	30848320	30839287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_30839464_30839822_30840020_30847036_30847150_30847967
transcript_168013.known	chr6	-	799	3	FSM	ENSG00000237923.1	ENST00000442852.1	799	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	41.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAGGAGTTCGAGACCAG	NA	False	NA	NA	False	NA	NA	NA	30848159	30839525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_30840020_30847036_30847150_30847967
transcript_168020.nnic	chr6	-	1018	2	NIC	ENSG00000237923.1	novel	799	3	NA	NA	-94	238	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGGACTCCAAAAGGCCT	NA	False	NA	NA	False	AAAAAG	-9	NA	30848253	30839287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_30840020_30847967
transcript_168021.nic	chr6	-	463	2	ISM	ENSG00000237923.1	ENST00000442852.1	799	3	-161	7514	-161	-7514	5prime_fragment	FALSE	canonical	3	151	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGAGTAACTTTTTTTT	NA	False	NA	-12	True	AATAAA	-19	NA	30848320	30847039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_30847150_30847967
transcript_168026.known	chr6	+	4148	20	FSM	ENSG00000204580.14	ENST00000324771.12	4148	20	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	214.688758806545	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTGAGTGGGTTCCT	NA	False	NA	18	True	AATAAA	-16	NA	30880848	30900154	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30881126_30884537_30884711_30885624_30885681_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30895403_30895515_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
transcript_16803.known	chr1	+	630	5	FSM	ENSG00000197965.12	ENST00000474859.5	630	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_4	236.798833400843	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTCCGGCGGACATCAC	167711033	False	NA	NA	False	NA	NA	NA	167722151	167787844	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_167722243_167765582_167765750_167772274_167772489_167773235_167773369_167787819
transcript_168043.nic	chr6	+	3833	19	NIC	ENSG00000204580.14	novel	3942	21	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	207.946166169736	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGGTTCCTTG	30882630	False	NA	20	True	AATAAA	-18	NA	30882912	30900156	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_30882984_30884537_30884711_30885624_30885681_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
transcript_16805.known	chr1	+	1596	5	FSM	ENSG00000197965.12	ENST00000448405.5	1596	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	261.669041921279	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAACAGTCACCATACAGC	167710865	True	NA	29	True	AGTAAA	-42	NA	167721983	167788753	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_167722243_167765582_167765750_167773235_167773369_167776063_167776167_167787819
transcript_168062.known	chr6	+	3820	19	FSM	ENSG00000204580.14	ENST00000376570.8	3820	19	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	207.946166169736	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACTGTGTGAGTGGGTTC	30883690	True	NA	16	True	AATAAA	-14	NA	30884083	30900152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30884146_30884537_30884711_30885624_30885681_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
transcript_168072.nic	chr6	+	3711	18	NIC	ENSG00000204580.14	novel	3942	21	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	143	junction_1	158.272245849449	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGGTTCCTTG	30880711	True	NA	20	True	AATAAA	-18	NA	30882916	30900156	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_30882984_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30895403_30895515_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
transcript_168081.nic	chr6	+	3837	18	NIC	ENSG00000204580.14	novel	3942	21	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_1	171.263773976917	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGGTTCCTTG	30880767	True	NA	20	True	AATAAA	-18	NA	30882972	30900156	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_30883166_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30895403_30895515_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
transcript_168087.known	chr6	+	3783	18	FSM	ENSG00000204580.14	ENST00000376569.7	3783	18	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	183.989205340044	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGGTTCCTTG	30883675	True	NA	20	True	AATAAA	-18	NA	30884068	30900156	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30884146_30884537_30884711_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
transcript_168089.nic	chr6	+	3888	17	NIC	ENSG00000204580.14	novel	4148	20	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	153.983752694075	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGGTTCCTTG	NA	False	NA	20	True	AATAAA	-18	NA	30880770	30900156	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_30881126_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
transcript_16809.known	chr1	+	1305	4	FSM	ENSG00000197965.12	ENST00000465787.5	1305	4	0	0	0	0	multi-exon	FALSE	canonical	3	519	junction_2	76.5419275081747	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAGAAGAAGA	167710874	True	NA	NA	False	TTTAAA	-13	NA	167721992	167773909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_167722243_167765582_167765750_167772274_167772489_167773235
transcript_168093.known	chr6	+	3588	17	FSM	ENSG00000204580.14	ENST00000418800.6	3588	17	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	136.195573991962	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGGGGGTAGCCCCGCC	30882330	False	NA	NA	False	NA	NA	NA	30882612	30899840	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30882984_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
transcript_168099.nic	chr6	+	3726	17	NIC	ENSG00000204580.14	novel	3942	21	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_1	152.77688746584	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGGTTCCTTG	30880767	True	NA	20	True	AATAAA	-18	NA	30882972	30900156	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_30883166_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
transcript_168126.known	chr6	+	3836	18	FSM	ENSG00000204580.14	ENST00000376568.8	3836	18	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	161.49749052653	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGGTTCCTTG	30884125	False	NA	20	True	AATAAA	-18	NA	30884518	30900156	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30884711_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30895403_30895515_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
transcript_168132.known	chr6	+	3575	30	FSM	ENSG00000137411.19	ENST00000676266.1	3575	30	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	32.4565015774841	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTGTTTATGGCTCTT	30912686	True	NA	11	True	GATAAA	-17	NA	30914237	30926459	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30914345_30914809_30915038_30915155_30915238_30915354_30915456_30915745_30915868_30915980_30916048_30916151_30916250_30916877_30916960_30917104_30917225_30917694_30917807_30918826_30918916_30919757_30919849_30920088_30920217_30920332_30920437_30920667_30920750_30921064_30921142_30921229_30921306_30921588_30921692_30921924_30921996_30922115_30922242_30922449_30922555_30922705_30922775_30922897_30922977_30923103_30923232_30923352_30923506_30924353_30924561_30925273_30925386_30925543_30925720_30925879_30926009_30926108
transcript_168136.known	chr6	+	3566	30	FSM	ENSG00000137411.19	ENST00000541562.6	3566	30	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	36.4820741738808	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTCTGGGAATGAGGAGA	30912779	True	NA	-35	True	NA	NA	NA	30914330	30926413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30914470_30914804_30915038_30915155_30915238_30915354_30915456_30915745_30915868_30915980_30916048_30916151_30916250_30916877_30916960_30917104_30917225_30917694_30917807_30918826_30918916_30919757_30919849_30920088_30920217_30920332_30920437_30920667_30920750_30921064_30921142_30921229_30921306_30921588_30921692_30921924_30921996_30922115_30922242_30922449_30922555_30922705_30922775_30922897_30922977_30923103_30923232_30923352_30923506_30924353_30924561_30925273_30925386_30925543_30925720_30925879_30926009_30926108
transcript_168139.nnic	chr6	+	3448	29	NIC	ENSG00000137411.19	novel	3575	30	NA	NA	-3	0	combination_of_known_splicesites	TRUE	canonical	1	2	junction_24	37.1049944380119	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTGTTTATGGCTCTT	30912665	True	NA	11	True	GATAAA	-17	NA	30914216	30926459	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_30914345_30914804_30915038_30915155_30915238_30915354_30915456_30915745_30915868_30915980_30916048_30916151_30916250_30916877_30916960_30917104_30917225_30917694_30917807_30918826_30918916_30919757_30919849_30920088_30920217_30920332_30920437_30920667_30920750_30921064_30921142_30921229_30921306_30921588_30921692_30921924_30921996_30922115_30922242_30922449_30922555_30922705_30922775_30922897_30922977_30923103_30923232_30924353_30924561_30925273_30925386_30925543_30925720_30925879_30926009_30926108
transcript_16814.known	chr1	+	3421	3	FSM	ENSG00000197965.12	ENST00000392121.7	3421	3	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	305.5	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTGTGTTGTGTGCTCA	167710870	True	NA	9	True	AATACA	-15	NA	167721988	167790819	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_167722243_167765582_167765750_167787819
transcript_168149.known	chr6	+	3362	29	FSM	ENSG00000137411.19	ENST00000625423.2	3362	29	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	37.1199104942622	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATGTCTGTTTATGGCT	30912668	True	NA	8	True	GATAAA	-14	NA	30914219	30926456	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30914345_30915155_30915238_30915354_30915456_30915745_30915868_30915980_30916048_30916151_30916250_30916877_30916960_30917104_30917225_30917694_30917807_30918826_30918916_30919757_30919849_30920088_30920217_30920332_30920437_30920667_30920750_30921064_30921142_30921229_30921306_30921588_30921692_30921924_30921996_30922115_30922242_30922449_30922555_30922705_30922775_30922897_30922977_30923103_30923232_30923352_30923506_30924353_30924561_30925273_30925386_30925543_30925720_30925879_30926009_30926108
transcript_16816.known	chr1	+	607	2	FSM	ENSG00000197965.12	ENST00000464954.1	607	2	0	0	0	0	multi-exon	FALSE	canonical	3	701	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATAAAATAAGTTCAGCAT	167710831	True	NA	NA	False	NA	NA	NA	167721949	167765896	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_167722243_167765582
transcript_168167.known	chr6	+	1712	14	FSM	ENSG00000213780.11	ENST00000259895.9	1712	14	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	5.47938579031019	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGGTCCCGGGCGCCTCC	30908191	False	NA	35	True	AATAAA	-17	NA	30908206	30914106	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30908404_30909033_30909174_30909434_30909540_30909931_30910064_30910664_30910762_30910852_30910942_30911157_30911270_30911430_30911500_30911683_30911768_30912013_30912147_30912327_30912459_30913109_30913158_30913308_30913388_30913810
transcript_168168.known	chr6	+	1673	14	FSM	ENSG00000213780.11	ENST00000376316.5	1673	14	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	9.02003030735275	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGGTCCCGGGCGCCTCC	30908205	False	NA	35	True	AATAAA	-17	NA	30908220	30914106	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_30908379_30909033_30909174_30909434_30909540_30909931_30910064_30910664_30910762_30910852_30910942_30911157_30911270_30911430_30911500_30911683_30911768_30912013_30912147_30912327_30912459_30913109_30913158_30913308_30913388_30913810
transcript_168186.nic	chr6	-	2888	19	NIC	ENSG00000204536.15	novel	2971	18	NA	NA	-147	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_18	40.9664496875187	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTGTTTGGAAATGTTA	-31157429	False	NA	-3	True	AATAAA	-17	NA	31158385	31142438	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_31142717_31142962_31143135_31143261_31143414_31144686_31144789_31144884_31145074_31145165_31145303_31145447_31145494_31145695_31145809_31148404_31148512_31148617_31148729_31150065_31150216_31150454_31150566_31150724_31150861_31150958_31151123_31154495_31154800_31156730_31156945_31157022_31157090_31157384_31157501_31158166
transcript_168187.nnic	chr6	-	2571	18	NNC	ENSG00000204536.15	novel	2625	18	NA	NA	-9	0	at_least_one_novel_splicesite	TRUE	canonical	3	10	junction_2	44.9130648141881	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTGTTTGGAAATGTTA	-31157270	False	NA	-3	True	AATAAA	-17	NA	31158226	31142438	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_31142717_31142962_31143093_31143261_31143414_31144686_31144789_31144884_31145074_31145165_31145303_31145447_31145494_31145695_31145809_31148404_31148512_31148617_31148729_31150065_31150216_31150454_31150566_31150724_31150861_31150958_31151123_31154495_31154800_31156730_31156945_31157022_31157090_31158166
transcript_168193.known	chr6	-	2625	18	FSM	ENSG00000204536.15	ENST00000376266.9	2625	18	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_17	37.0597572244656	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTGTTTGGAAATGTTA	-31157282	False	NA	-3	True	AATAAA	-17	NA	31158238	31142438	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31142717_31142962_31143135_31143261_31143414_31144686_31144789_31144884_31145074_31145165_31145303_31145447_31145494_31145695_31145809_31148404_31148512_31148617_31148729_31150065_31150216_31150454_31150566_31150724_31150861_31150958_31151123_31154495_31154800_31156730_31156945_31157022_31157090_31158166
transcript_16821.known	chr1	+	3302	20	FSM	ENSG00000143164.16	ENST00000367843.7	3302	20	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_10	33.8371527848792	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTTTTTATTTAATGC	167933268	True	NA	15	True	ATTAAA	-29	NA	167936660	168075843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_167937009_167951799_167951862_167966628_167966722_167974829_167975016_167987494_167987609_167991203_167991340_167993225_167993441_168002481_168002576_168003869_168003990_168004532_168004794_168022987_168023048_168038370_168038489_168043024_168043141_168044584_168044672_168044899_168045228_168063620_168063760_168065589_168065747_168066376_168066466_168068357_168068464_168075370
transcript_168220.known	chr6	+	3243	4	FSM	ENSG00000137310.12	ENST00000376257.8	3243	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	10.8730042868667	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCCCTCTGATGTTGTG	NA	False	NA	16	True	AATAAA	-17	NA	31158588	31164215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31158723_31158896_31159708_31161446_31162006_31162476
transcript_168223.known	chr6	+	3039	4	FSM	ENSG00000137310.12	ENST00000376255.4	3039	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	37.0345184328831	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCCCTCTGATGTTGTG	NA	False	NA	16	True	AATAAA	-17	NA	31158546	31164215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31158723_31159142_31159708_31161446_31162006_31162476
transcript_168232.known	chr6	-	1409	5	FSM	ENSG00000204531.21	ENST00000259915.13	1409	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2698.14680614306	4258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTTGTCCTTCAGTT	NA	False	NA	-2	True	AATAAA	-33	NA	31170682	31164336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31164868_31165127_31165287_31165570_31165702_31165926_31166048_31170215
transcript_168233.known	chr6	-	369	3	Genic_Genomic	ENSG00000204531.21	novel	1409	5	NA	NA	38	-4218	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACATCTCCTAGGCCTGC	NA	False	NA	NA	False	NA	NA	NA	31170620	31169917	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Genic_Genomic_chr6_-_31169933_31170262_31170305_31170308
transcript_168234.known	chr6	-	2838	1	FSM	ENSG00000272501.1	ENST00000606367.1	2838	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTTTTCCTATTTATCC	NA	False	NA	NA	False	AATAAA	-22	NA	31198037	31195199	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31195200_31198000
transcript_168240.known	chr6	-	1554	8	FSM	ENSG00000204525.18	ENST00000383329.7	1554	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	224.569247535756	1200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCATGTTCGCTGTGCTG	-31272029	True	NA	-5	True	AATAAA	-21	NA	31272086	31268748	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31269174_31269337_31269386_31269492_31269544_31269965_31270086_31270209_31270486_31271072_31271349_31271598_31271869_31271998
transcript_168245.nic	chr6	-	1855	7	NIC	ENSG00000204525.18	novel	1542	8	NA	NA	-25	0	intron_retention	FALSE	canonical	2	6	junction_4	220.591376883947	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCATGTTCGCTGTGCTG	NA	False	NA	-5	True	AATAAA	-21	NA	31272155	31268748	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_31269174_31269337_31269386_31269492_31269526_31269965_31270086_31270209_31270486_31271072_31271869_31271998
transcript_168256.known	chr6	-	1880	6	FSM	ENSG00000204525.18	ENST00000487245.5	1880	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	228.184486764548	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCATGTTCGCTGTGCTG	-31271993	False	NA	-5	True	AATAAA	-21	NA	31272050	31268748	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31269174_31269337_31269386_31269492_31269526_31269965_31270086_31270209_31270486_31271072
transcript_168259.known	chr6	-	1536	8	FSM	ENSG00000234745.13	ENST00000412585.7	1536	8	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_6	108.88975889328	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCTGCATGTTCGCTGTG	-31357094	True	NA	-9	True	AATAAA	-18	NA	31357179	31353874	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31354297_31354478_31354527_31354632_31354666_31355106_31355224_31355316_31355593_31356166_31356443_31356687_31356958_31357085
transcript_168264.nic	chr6	-	1695	7	NIC	ENSG00000234745.13	novel	1536	8	NA	NA	-54	0	intron_retention	FALSE	canonical	3	45	junction_5	99.3221470211397	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCATGTTCGCTGTGCTG	NA	False	NA	-6	True	AATAAA	-21	NA	31357242	31353871	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_31354297_31354478_31354527_31354632_31354666_31355106_31355593_31356166_31356443_31356687_31356958_31357085
transcript_16828.known	chr1	+	3186	19	FSM	ENSG00000143164.16	ENST00000312263.10	3186	19	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_10	19.255270242164	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCTGAATTTGACTTTTT	167933315	True	NA	6	True	ATTAAA	-20	NA	167936707	168075834	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_167937009_167951799_167951862_167966628_167966722_167974829_167975016_167987494_167987609_167991203_167991340_167993225_167993441_168002481_168002576_168003869_168003990_168004532_168004794_168038370_168038489_168043024_168043141_168044584_168044672_168044899_168045228_168063620_168063760_168065589_168065747_168066376_168066466_168068357_168068464_168075370
transcript_168280.known	chr6	+	9148	2	FSM	ENSG00000206337.12	ENST00000414046.3	9148	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTAATGATTAAGACTT	NA	False	NA	NA	False	TATAAA	-22	NA	31463169	31472408	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31463280_31463370
transcript_168282.known	chr6	+	1370	6	FSM	ENSG00000204520.14	ENST00000449934.7	1370	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	10.9068785635488	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTCATTGTTTTTGTT	31403498	True	NA	10	True	NA	NA	NA	31403594	31415315	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31403703_31410542_31410798_31411071_31411360_31411946_31412226_31412324_31412461_31415011
transcript_168284.known	chr6	+	2411	6	FSM	ENSG00000204516.10	ENST00000538442.5	2411	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	46.5935617870109	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTTCTGGTCTGTGTTTT	31494443	True	NA	NA	False	TTTAAA	-4	NA	31494880	31511123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31494996_31505616_31505872_31506142_31506431_31507021_31507301_31507399_31507532_31509781
transcript_168285.known	chr6	+	2416	6	FSM	ENSG00000204516.10	ENST00000252229.7	2416	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	19.1039262980153	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTCTGGTCTGTGTTTTA	31497707	False	NA	NA	False	AATAGA	-1	NA	31498144	31511124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31498264_31505616_31505872_31506142_31506431_31507021_31507301_31507399_31507532_31509781
transcript_168292.known	chr6	-	2068	2	FSM	ENSG00000286940.1	ENST00000665353.1	2068	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTATGCCATGAGTAAAA	NA	False	NA	NA	False	AATAAA	-22	NA	31494935	31479972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31481359_31494253
transcript_168309.known	chr6	-	2003	11	FSM	ENSG00000198563.14	ENST00000458640.5	2003	11	0	0	0	0	multi-exon	FALSE	canonical	3	614	junction_10	389.023713930141	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTCGTCCCTTTATTGT	-31542370	False	NA	-2	True	ACTAAA	-32	NA	31542448	31530218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31530451_31530778_31530927_31531052_31531198_31531295_31531406_31532779_31532912_31535366_31535486_31536499_31536684_31538762_31538856_31539146_31539275_31540321_31540535_31541949
transcript_168313.known	chr6	-	1681	11	FSM	ENSG00000198563.14	ENST00000396172.6	1681	11	0	0	0	0	multi-exon	FALSE	canonical	3	815	junction_10	340.47208402452	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATAAGTGCTTCGTCCCT	-31505200	True	NA	-9	True	ACTAAA	-25	NA	31542003	31530225	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31530451_31530778_31530927_31531052_31531198_31531295_31531406_31532779_31532912_31535366_31535486_31536499_31536684_31538762_31538856_31539146_31539275_31540321_31540665_31541949
transcript_168328.known	chr6	-	4027	10	FSM	ENSG00000198563.14	ENST00000462256.5	4027	10	0	0	0	0	multi-exon	FALSE	canonical	3	614	junction_9	409.06590371265	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTCGTCCCTTTATTGT	-31505214	True	NA	-2	True	ACTAAA	-32	NA	31542017	31530218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31530451_31530778_31530927_31531052_31531198_31531295_31531406_31532779_31535486_31536499_31536684_31538762_31538856_31539146_31539275_31540321_31540535_31541949
transcript_168330.nic	chr6	-	4171	10	NIC	ENSG00000198563.14	novel	1681	11	NA	NA	-20	0	intron_retention	FALSE	canonical	3	815	junction_9	357.109209702468	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATAAGTGCTTCGTCCCT	-31505235	True	NA	-9	True	ACTAAA	-25	NA	31542038	31530225	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_31530451_31530778_31530927_31531052_31531198_31531295_31531406_31532779_31535486_31536499_31536684_31538762_31538856_31539146_31539275_31540321_31540665_31541949
transcript_168350.known	chr6	+	1411	4	FSM	ENSG00000204498.11	ENST00000376146.8	1411	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	15.1730755689881	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCAGTGTCTCCTCTGTC	NA	False	NA	31	True	NA	NA	NA	31546869	31558829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31546974_31548162_31548440_31557627_31557850_31558021
transcript_168352.known	chr6	+	1401	4	FSM	ENSG00000204498.11	ENST00000376145.8	1401	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	20.8219969156552	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCAGTGTCTCCTCTGTC	31547015	True	NA	31	True	NA	NA	NA	31547612	31558829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31547752_31548162_31548440_31557627_31557805_31558021
transcript_168353.known	chr6	+	1451	4	FSM	ENSG00000204498.11	ENST00000376148.9	1451	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	10.7082522694727	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCAGTGTCTCCTCTGTC	31547010	True	NA	31	True	NA	NA	NA	31547607	31558829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31547752_31548162_31548440_31557627_31557850_31558021
transcript_168355.known	chr6	-	1370	3	FSM	ENSG00000213760.11	ENST00000303892.10	1370	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTTTGCCTCATCATTT	-31546530	True	NA	0	True	AATAAA	-38	NA	31546608	31544443	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31545582_31546108_31546210_31546477
transcript_168356.known	chr6	-	893	4	FSM	ENSG00000227507.3	ENST00000429299.3	893	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.24721912892465	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTGAGTTGCGACACAC	NA	False	NA	-5	True	AATAAA	-30	NA	31582424	31580557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31581164_31581558_31581631_31581813_31581860_31582255
transcript_168357.known	chr6	+	524	3	FSM	ENSG00000204472.13	ENST00000376049.4	524	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	11.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGCTTAGTTTTTATTTG	31615889	False	NA	21	True	AATAAA	-22	NA	31615990	31617021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31616146_31616343_31616507_31616815
transcript_168360.known	chr6	+	6861	31	FSM	ENSG00000204469.13	ENST00000376007.8	6861	31	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	204.692615076037	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTACAATGATTTGGGGG	31580828	True	NA	29	True	AATAAA	-19	NA	31620719	31637771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31620859_31622726_31622902_31623731_31623910_31624260_31624361_31624449_31624523_31625170_31625315_31625459_31625612_31625791_31625872_31626019_31626163_31626771_31626863_31626981_31627199_31627764_31628240_31629143_31629335_31629547_31629846_31630590_31630802_31631138_31632993_31633378_31633648_31633858_31633990_31634235_31634366_31634471_31634558_31634752_31634978_31635131_31635273_31635393_31635466_31635581_31635750_31635966_31636050_31636208_31636420_31636509_31636609_31636732_31636946_31637041_31637137_31637233_31637325_31637445
transcript_168361.known	chr6	+	6903	31	FSM	ENSG00000204469.13	ENST00000376033.3	6903	31	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	208.764314213155	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTACAATGATTTGGGGG	31580823	True	NA	29	True	AATAAA	-19	NA	31620714	31637771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31620859_31622689_31622902_31623731_31623910_31624260_31624361_31624449_31624523_31625170_31625315_31625459_31625612_31625791_31625872_31626019_31626163_31626771_31626863_31626981_31627199_31627764_31628240_31629143_31629335_31629547_31629846_31630590_31630802_31631138_31632993_31633378_31633648_31633858_31633990_31634235_31634366_31634471_31634558_31634752_31634978_31635131_31635273_31635393_31635466_31635581_31635750_31635966_31636050_31636208_31636420_31636509_31636609_31636732_31636946_31637041_31637137_31637233_31637325_31637445
transcript_16840.known	chr1	+	2803	12	FSM	ENSG00000143164.16	ENST00000470721.5	2803	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_11	44.0172768484947	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAATTAATTA	167933280	True	NA	NA	False	AATATA	-18	NA	167936672	168024050	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_167937009_167951799_167951862_167966628_167966722_167974829_167975016_167987494_167987609_167991203_167991340_167993225_167993441_168002481_168002576_168003869_168003990_168004532_168004794_168019544_168019668_168022987
transcript_168414.nic	chr6	-	3777	26	NIC	ENSG00000204463.14	novel	3843	26	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	101	junction_14	93.355355497154	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	-31651424	False	NA	-13	True	AATAAA	-31	NA	31652418	31639027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644306_31644415_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652246
transcript_168417.known	chr6	-	3887	26	FSM	ENSG00000204463.14	ENST00000676615.2	3843	26	-44	0	0	0	multi-exon	FALSE	canonical	3	101	junction_14	94.3170313358091	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	NA	False	NA	-13	True	AATAAA	-31	NA	31652705	31639027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644306_31644415_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652423
transcript_168425.known	chr6	-	3920	26	FSM	ENSG00000204463.14	ENST00000676571.1	3920	26	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_14	104.207669583385	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	NA	False	NA	-13	True	AATAAA	-31	NA	31652705	31639027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644228_31644306_31644415_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652423
transcript_16843.nic	chr1	+	2941	11	ISM	ENSG00000143164.16	ENST00000367843.7	3302	20	-61	51605	41	188	5prime_fragment	FALSE	canonical	3	22	junction_10	30.1323746160172	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACAGAAAAAAGGCAGGTG	NA	False	NA	NA	False	TTTAAA	-16	NA	167936599	168024238	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_167937009_167951799_167951862_167966628_167966722_167974829_167975016_167987494_167987609_167991203_167991340_167993225_167993441_168002481_168002576_168003869_168003990_168004532_168004794_168022987
transcript_168449.known	chr6	-	3644	25	FSM	ENSG00000204463.14	ENST00000375976.8	3644	25	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_24	76.668614105701	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	-31651399	False	NA	-13	True	AATAAA	-31	NA	31652393	31639027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652246
transcript_168450.nic	chr6	-	3816	25	NIC	ENSG00000204463.14	novel	3779	25	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_24	87.7943857354596	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	NA	False	NA	-13	True	AATAAA	-31	NA	31652718	31639027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652399
transcript_168451.known	chr6	-	3779	25	FSM	ENSG00000204463.14	ENST00000211379.9	3779	25	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_24	77.9641566504905	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	NA	False	NA	-13	True	AATAAA	-31	NA	31652705	31639027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652423
transcript_168452.nic	chr6	-	3703	25	NIC	ENSG00000204463.14	novel	3779	25	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_24	88.3331367922342	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	NA	False	NA	-13	True	AATAAA	-31	NA	31652718	31639027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652512
transcript_16846.known	chr1	-	2177	5	FSM	ENSG00000143158.11	ENST00000367846.8	2177	5	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_1	36.9425229241318	305	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTGTTTCACTTCCTT	-167931477	True	NA	-6	True	ATTAAA	-12	NA	167936040	167916728	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_167918360_167919978_167920091_167920546_167920632_167924496_167924538_167935732
transcript_168485.known	chr6	-	3701	24	FSM	ENSG00000204463.14	ENST00000375964.11	3701	24	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_14	98.9149259257089	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	NA	False	NA	-13	True	AATAAA	-31	NA	31652705	31639027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652423
transcript_168512.nic	chr6	-	3521	24	NIC	ENSG00000204463.14	novel	3626	24	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	132	junction_23	82.6729041084442	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGTCTCCATTAGGTAG	-31651424	False	NA	-14	True	AATAAA	-30	NA	31652418	31639028	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_31639227_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652246
transcript_168515.known	chr6	-	3626	24	FSM	ENSG00000204463.14	ENST00000362049.10	3626	24	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_23	83.8609660432605	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGTCTCCATTAGGTAG	NA	False	NA	-14	True	AATAAA	-30	NA	31652700	31639028	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31639227_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652423
transcript_16853.known	chr1	-	2676	8	FSM	ENSG00000143147.15	ENST00000367838.5	2676	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	24.651861708891	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGTACCACTGTTTTACCG	-168136340	False	NA	NA	False	ATTAAA	-17	NA	168136386	168084758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_168085797_168087584_168087705_168090563_168090669_168096507_168097233_168104476_168104895_168114455_168114550_168133875_168133922_168136256
transcript_168611.known	chr6	+	709	6	FSM	ENSG00000204444.11	ENST00000375920.8	709	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	5.84465567848098	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCATTCTGGGGTTTGTCT	31652131	True	NA	9	True	AATAAA	-20	NA	31652416	31658210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31652552_31656471_31656627_31657224_31657299_31657379_31657479_31657624_31657724_31658063
transcript_168612.known	chr6	-	609	4	FSM	ENSG00000204463.14	ENST00000464126.1	609	4	0	0	0	0	multi-exon	TRUE	canonical	3	357	junction_2	80.7313790019442	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	-31640515	False	NA	-13	True	AATAAA	-31	NA	31640539	31639027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384
transcript_168613.known	chr6	+	761	6	FSM	ENSG00000204444.11	ENST00000375916.4	761	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	9.77752524926425	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCATTCTGGGGTTTGTCT	31655879	False	NA	9	True	AATAAA	-20	NA	31655893	31658210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31656081_31656471_31656627_31657224_31657299_31657379_31657479_31657624_31657724_31658063
transcript_168614.known	chr6	-	2481	1	FSM	ENSG00000204439.4	ENST00000375911.2	2481	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGAGTTTAGGTGGTAGA	-31660566	False	NA	31	True	NA	NA	NA	31660778	31658297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31658300_31660800
transcript_168630.known	chr6	+	1061	7	FSM	ENSG00000204435.15	ENST00000375885.8	1061	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	431.474893050955	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTAGTCTGCTGGTGCTTGC	NA	False	NA	17	True	AATAAA	-20	NA	31665235	31670070	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31665494_31666820_31666904_31667867_31667971_31668538_31668655_31669096_31669173_31669318_31669509_31669835
transcript_168631.known	chr6	+	929	7	FSM	ENSG00000204435.15	ENST00000375882.7	929	7	0	0	0	0	multi-exon	FALSE	canonical	3	1079	junction_6	55.5930151487877	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTAGTCTGCTGGTGCT	31648064	True	NA	14	True	AATAAA	-17	NA	31666079	31670067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31666209_31666820_31666904_31667867_31667971_31668538_31668655_31669096_31669173_31669318_31669509_31669835
transcript_168632.known	chr6	+	908	7	FSM	ENSG00000204435.15	ENST00000375865.6	908	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	432.954353508799	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTAGTCTGCTGGTGCTTGC	31666183	True	NA	17	True	AATAAA	-20	NA	31666291	31670070	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31666397_31666820_31666904_31667867_31667971_31668538_31668655_31669096_31669173_31669318_31669509_31669835
transcript_168633.known	chr6	+	936	7	FSM	ENSG00000204435.15	ENST00000375866.2	936	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	435.543593940058	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTAGTCTGCTGGTGCTTGC	31666246	False	NA	17	True	AATAAA	-20	NA	31666354	31670070	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31666488_31666820_31666904_31667867_31667971_31668538_31668655_31669096_31669173_31669318_31669509_31669835
transcript_168639.nnic	chr6	-	1716	4	NNC	ENSG00000204438.11	novel	1800	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	87.5455437028192	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAGCTATTTTGAGGAA	-31665650	False	NA	-4	True	AATAAA	-28	NA	31665862	31662075	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_31662711_31663852_31664578_31664840_31664908_31665573
transcript_16864.nnic	chr1	-	2215	7	NNC	ENSG00000143147.15	novel	2676	8	NA	NA	91	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	25.719102282588	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATCTAGAGATGT	-168136793	False	141	-14	True	NA	NA	NA	168136839	168085265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_168085797_168087584_168087705_168090563_168090669_168096507_168097233_168104476_168104536_168104802_168104895_168136256
transcript_168641.known	chr6	-	1800	4	FSM	ENSG00000204438.11	ENST00000375895.6	1800	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	72.9566081082904	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAGCTATTTTGAGGAA	-31665638	False	NA	-4	True	AATAAA	-28	NA	31665850	31662075	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31662711_31663852_31664578_31664840_31665004_31665573
transcript_168642.known	chr6	-	2793	4	FSM	ENSG00000204438.11	ENST00000375906.5	2793	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	81.6183530558878	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTCTACACTTTTCTTT	NA	False	NA	NA	False	TTTAAA	-17	NA	31666283	31661228	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31662711_31663852_31664578_31664840_31665004_31665860
transcript_168644.nnic	chr6	-	1719	4	NNC	ENSG00000204438.11	novel	1814	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	86.9597608092387	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAGCTATTTTGAGGAA	-31665650	False	NA	-4	True	AATAAA	-28	NA	31665862	31662075	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_31662711_31663852_31664581_31664840_31664908_31665573
transcript_168646.known	chr6	-	1814	4	FSM	ENSG00000204438.11	ENST00000375900.8	1814	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	70.9804354890995	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAGCTATTTTGAGGAA	-31665649	False	NA	-4	True	AATAAA	-28	NA	31665861	31662075	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31662711_31663852_31664581_31664840_31665004_31665573
transcript_168659.known	chr6	-	836	3	FSM	ENSG00000204428.12	ENST00000474395.5	836	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	3.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGTAAACTGTTTGGT	NA	False	NA	-17	True	AATAAA	-2	NA	31681476	31676699	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31677121_31679100_31679269_31681229
transcript_168660.known	chr6	-	2332	22	FSM	ENSG00000204422.7	ENST00000461287.1	2332	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	83.1891814438455	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATCAGGCTAATTGTATA	NA	False	NA	-6	True	AATAAA	-15	NA	31714072	31686961	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31687296_31687497_31687545_31687641_31687741_31687823_31687901_31688040_31688104_31688248_31688306_31688722_31688787_31689014_31689120_31689580_31689705_31690077_31690128_31690538_31690603_31691578_31691681_31691803_31691919_31693026_31693150_31693358_31693433_31696947_31697034_31700941_31701029_31701273_31701341_31702073_31702131_31712016_31712116_31712663_31712790_31713760
transcript_168665.known	chr6	-	2260	20	FSM	ENSG00000204427.12	ENST00000492084.5	2260	20	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_19	54.8118918694174	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGGCTAATTGTATAACT	-31702937	False	NA	-3	True	AATAAA	-18	NA	31703073	31686958	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31687296_31687497_31687545_31687641_31687741_31687823_31687901_31688040_31688104_31688248_31688306_31688722_31688787_31689014_31689120_31689580_31689705_31690077_31690128_31690538_31690603_31691578_31691681_31691803_31691919_31693026_31693150_31693358_31693433_31696947_31697034_31700941_31701029_31701273_31701341_31702073_31702131_31702611
transcript_168666.known	chr6	-	1977	20	FSM	ENSG00000204427.12	ENST00000395952.8	1977	20	0	0	0	0	multi-exon	TRUE	canonical	3	202	junction_17	19.2136262819658	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTAATTGTATAACTTCTC	NA	False	NA	1	True	AATAAA	-22	NA	31703324	31686954	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31687296_31687497_31687545_31687641_31687741_31687823_31687901_31688040_31688104_31688248_31688306_31688722_31688787_31689014_31689120_31689580_31689705_31690077_31690128_31690538_31690603_31691578_31691681_31691803_31691919_31693026_31693150_31693358_31693433_31696947_31697034_31700941_31701029_31701273_31701341_31702073_31702131_31703149
transcript_168671.known	chr6	-	1892	19	FSM	ENSG00000204427.12	ENST00000495769.5	1892	19	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_17	55.2984048616858	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATTAATAAAAAGGTAT	NA	False	NA	-33	True	NA	NA	NA	31703340	31686988	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31687296_31687497_31687545_31687641_31687741_31687823_31687901_31688040_31688104_31688248_31688306_31688722_31688787_31689014_31689120_31689580_31689705_31690077_31690128_31690538_31690603_31691578_31691681_31691803_31691919_31693026_31693150_31693358_31693433_31696947_31697034_31700941_31701029_31702073_31702131_31703149
transcript_16868.nnic	chr1	-	2567	7	NIC	ENSG00000143147.15	novel	2676	8	NA	NA	100	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	21.3853532431273	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATCTAGAGATGT	-168136784	False	141	-14	True	NA	NA	NA	168136830	168085265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_168085797_168087584_168087705_168090563_168090669_168096507_168097233_168104476_168104895_168114455_168114550_168136256
transcript_168681.known	chr6	-	1906	18	FSM	ENSG00000204427.12	ENST00000440843.2	1906	18	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_17	57.5525034854214	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGGGTGAGAGGAGACAT	-31702934	False	NA	NA	False	NA	NA	NA	31703070	31687185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31687296_31687497_31687545_31687641_31687741_31687823_31687901_31688040_31688104_31688248_31688306_31688722_31688787_31689014_31689120_31689580_31689705_31690077_31690128_31690538_31690603_31691578_31691681_31691803_31691919_31693026_31693150_31693358_31693433_31696947_31697034_31700941_31701029_31702611
transcript_168682.nic	chr6	-	1889	18	NIC	ENSG00000204427.12	novel	1892	19	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_17	51.1398787369684	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGGCTAATTGTATAACT	NA	False	NA	-3	True	AATAAA	-18	NA	31703364	31686958	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_31687296_31687497_31687545_31687641_31687741_31687823_31687901_31688040_31688104_31688248_31688306_31688722_31688787_31689014_31689120_31689580_31689705_31690077_31690128_31690538_31690603_31691578_31691681_31691803_31691919_31693026_31693150_31693358_31693433_31696947_31697034_31700941_31701029_31703149
transcript_16869.nnic	chr1	-	2269	7	NIC	ENSG00000143147.15	novel	2400	7	NA	NA	-84	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	20.4593092095831	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATCTAGAGATGT	-168136968	False	NA	-14	True	NA	NA	NA	168137014	168085265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_168085797_168087584_168087705_168090563_168090669_168096507_168097233_168104476_168104895_168114455_168114550_168136738
transcript_168732.known	chr6	+	2708	25	FSM	ENSG00000204410.16	ENST00000375703.7	2708	25	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_8	19.7715687429085	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTGTTTCTTTAGTCTC	31738300	True	NA	NA	False	AATAAA	-17	NA	31740020	31762676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31740063_31740453_31740614_31741162_31741287_31742876_31742958_31743107_31743171_31743903_31744026_31744189_31744300_31744545_31744582_31745236_31745320_31747386_31747433_31753300_31753440_31753566_31753630_31758164_31758294_31758547_31758621_31758765_31758876_31759096_31759178_31759424_31759513_31759785_31759976_31760089_31760217_31760689_31760840_31761184_31761263_31761471_31761616_31761817_31761956_31762111_31762186_31762419
transcript_168737.known	chr6	+	2936	25	FSM	ENSG00000204410.16	ENST00000375755.8	2936	25	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_1	19.9551145629942	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTGTTTCTTTAGTCTC	31738227	True	NA	NA	False	AATAAA	-17	NA	31739947	31762676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31740221_31740453_31740614_31741162_31741287_31742876_31742958_31743107_31743171_31743903_31744026_31744189_31744300_31744545_31744582_31745236_31745320_31747386_31747433_31753300_31753440_31753566_31753630_31758164_31758294_31758547_31758621_31758765_31758876_31759096_31759178_31759424_31759513_31759785_31759976_31760089_31760217_31760689_31760840_31761187_31761263_31761471_31761616_31761817_31761956_31762111_31762186_31762419
transcript_168765.known	chr6	-	1235	7	FSM	ENSG00000213722.10	ENST00000416410.6	1235	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	188.589206713663	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTGTGACTGGTGTCT	-31728854	False	126	-6	True	AATAAA	-20	NA	31729796	31727037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31727354_31727542_31727693_31728172_31728293_31728450_31728525_31728645_31728746_31728864_31729226_31729682
transcript_168766.known	chr6	-	1098	7	FSM	ENSG00000213719.8	ENST00000616760.1	1098	7	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_6	1033.79188750283	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGGGATTTAAAGTGTGG	-31735603	True	NA	-7	True	AATAAA	-31	NA	31736545	31730582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31731004_31732216_31732399_31733565_31733673_31733835_31733962_31734153_31734264_31736261_31736351_31736482
transcript_168767.known	chr6	-	1127	7	FSM	ENSG00000213719.8	ENST00000375779.6	1127	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	1062.05765955631	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGATTTAAAGTGTGGGC	-31735630	True	NA	-5	True	AATAAA	-33	NA	31736572	31730580	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31731004_31732216_31732399_31733565_31733673_31733835_31733962_31734153_31734264_31736261_31736413_31736544
transcript_168769.known	chr6	-	937	6	FSM	ENSG00000213722.10	ENST00000480913.5	937	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	196.199286441108	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTGTGACTGGTGTCT	-31729285	False	NA	-6	True	AATAAA	-20	NA	31730227	31727037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31727354_31727542_31727693_31728172_31728293_31728450_31728525_31728645_31728746_31730050
transcript_16877.nnic	chr1	-	2713	6	NIC	ENSG00000143147.15	novel	2400	7	NA	NA	107	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	22.0181743112366	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATCTAGAGATGT	-168136777	False	141	-14	True	NA	NA	NA	168136823	168085265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_168085797_168087584_168087705_168090563_168090669_168096507_168097233_168104476_168104895_168136009
transcript_168770.known	chr6	-	1254	6	FSM	ENSG00000213719.8	ENST00000375784.7	1254	6	0	0	0	0	multi-exon	FALSE	canonical	3	2642	junction_5	198.062010491664	1025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGATTTAAAGTGTGGGC	-31735625	True	NA	-5	True	AATAAA	-33	NA	31736567	31730580	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31731004_31732216_31732399_31733565_31733673_31733835_31733962_31734153_31734264_31736261
transcript_168771.known	chr6	-	898	5	FSM	ENSG00000213722.10	ENST00000483792.1	898	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	252.731576974465	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTGTGACTGGTGTCT	-31729320	False	NA	-6	True	AATAAA	-20	NA	31730262	31727037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31727354_31727542_31727693_31728172_31728293_31728645_31728746_31730050
transcript_168772.known	chr6	-	1261	7	FSM	ENSG00000213722.10	ENST00000436437.2	1261	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	190.788422662965	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTGTGACTGGTGTCT	-31728559	False	103	-6	True	AATAAA	-20	NA	31729501	31727037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31727354_31727542_31727693_31728172_31728293_31728450_31728525_31728645_31728746_31728864_31729226_31729361
transcript_16878.nnic	chr1	-	2595	6	NIC	ENSG00000143147.15	novel	2676	8	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_5	21.6370053380776	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATCTAGAGATGT	-168136811	True	NA	-14	True	NA	NA	NA	168136952	168085265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_168085797_168087584_168087705_168090563_168090669_168096507_168097233_168104476_168104895_168136256
transcript_168782.known	chr6	-	4111	30	FSM	ENSG00000204394.13	ENST00000375663.8	4111	30	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_11	168.215456936744	1165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCTTGTCGTCTGTGGTG	-31795731	False	NA	-1	True	AATAAA	-17	NA	31795752	31777517	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31777663_31778966_31779293_31779424_31779537_31779607_31779815_31779997_31780154_31780440_31780569_31780704_31780784_31780869_31780939_31781018_31781124_31781480_31781607_31781690_31781762_31781846_31781953_31782086_31782178_31782284_31782444_31782529_31782634_31782720_31782846_31783095_31783187_31784213_31784309_31784393_31784503_31784594_31784715_31785245_31785328_31785568_31785734_31791609_31791738_31791870_31791972_31792216_31792302_31792391_31792517_31792756_31792896_31792985_31793121_31794830_31795251_31795545
transcript_16879.known	chr1	-	7815	6	FSM	ENSG00000143147.15	ENST00000682931.1	7815	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	17.8706463229509	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTGGAAATGGTGAATT	-168136789	True	NA	0	True	ATTAAA	-20	NA	168136930	168079541	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_168085797_168087584_168087705_168090563_168090669_168096507_168097233_168104476_168104895_168136738
transcript_16880.nnic	chr1	-	2325	6	NIC	ENSG00000143147.15	novel	8256	7	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	22.782449385437	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATCTAGAGATGT	NA	False	NA	-14	True	NA	NA	NA	168137590	168085265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_168085797_168087584_168087705_168090563_168090669_168096507_168097233_168104476_168104895_168137164
transcript_16881.known	chr1	-	7806	6	FSM	ENSG00000143147.15	ENST00000271357.9	7806	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	22.0181743112366	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTGTGGAAATGGTGAAT	-168137527	True	NA	-1	True	ATTAAA	-19	NA	168137573	168079542	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_168085797_168087584_168087705_168090563_168090669_168096507_168097233_168104476_168104895_168137389
transcript_16884.nnic	chr1	+	1956	8	NNC	ENSG00000143155.13	novel	2998	7	NA	NA	-29	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	155.031267419031	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTACTATTTCATTTATT	168172880	True	NA	17	True	AATAAA	-23	NA	168178932	168202114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_168179182_168183901_168184082_168184778_168184879_168191368_168191501_168196546_168196643_168198918_168198982_168199902_168200705_168201780
transcript_168843.known	chr6	-	820	5	FSM	ENSG00000204392.11	ENST00000491421.5	820	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	394.13853846078	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTGGTTCTGTTA	-31805741	False	NA	-6	True	AATAAA	-15	NA	31806659	31797395	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31797883_31797989_31798050_31798476_31798508_31806074_31806143_31806485
transcript_168845.known	chr6	-	858	5	FSM	ENSG00000204392.11	ENST00000375661.6	858	5	0	0	0	0	multi-exon	FALSE	canonical	3	886	junction_4	17.1810215063017	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTGGTTCTGTTA	NA	False	NA	-6	True	AATAAA	-15	NA	31806966	31797395	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31797883_31797989_31798050_31798476_31798508_31806074_31806143_31806754
transcript_168846.known	chr6	-	641	4	FSM	ENSG00000204392.11	ENST00000470083.5	641	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	413.730185829686	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTGGTTCTGTTA	-31805899	True	NA	-6	True	AATAAA	-15	NA	31806817	31797395	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31797883_31797989_31798050_31798476_31798508_31806754
transcript_168847.known	chr6	-	713	4	FSM	ENSG00000204392.11	ENST00000470086.5	713	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	407.436157234753	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTGGTTCTGTTA	-31805934	True	NA	-6	True	AATAAA	-15	NA	31806852	31797395	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31797883_31797989_31798050_31806074_31806143_31806754
transcript_168848.known	chr6	-	767	5	FSM	ENSG00000204392.11	ENST00000493387.5	767	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	394.13853846078	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTGGTTCTGTTA	-31805742	False	NA	-6	True	AATAAA	-15	NA	31806660	31797395	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31797883_31797989_31798050_31798476_31798508_31806074_31806122_31806518
transcript_16885.known	chr1	+	2998	7	FSM	ENSG00000143155.13	ENST00000367833.7	2998	7	0	0	0	0	multi-exon	FALSE	canonical	1	111	junction_6	106.981955903269	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGTTTTACTATTTCAT	168172909	True	NA	12	True	AATAAA	-18	NA	168178961	168202109	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_168179182_168183901_168184082_168184778_168184879_168191368_168191501_168196546_168196643_168198918_168198982_168199902
transcript_168850.known	chr6	+	2400	1	FSM	ENSG00000204389.10	ENST00000375651.7	2400	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	408	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGCCTTTTATTCCTTT	NA	False	NA	14	True	AATAAA	-14	NA	31815542	31817942	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31815500_31817900
transcript_168851.known	chr6	+	847	5	FSM	ENSG00000204387.14	ENST00000375638.7	847	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_2	246.041028082716	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACGTGGTTTGGTCTCA	NA	False	NA	95	True	AATAAA	-16	NA	31834907	31839761	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31835201_31835410_31835452_31836423_31836518_31837235_31837436_31839542
transcript_168852.nic	chr6	+	697	5	NIC	ENSG00000204387.14	novel	847	5	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	278.018322237942	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACGTGGTTTGGTCTCA	31834020	True	NA	95	True	AATAAA	-16	NA	31834914	31839761	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_31835058_31835410_31835452_31836423_31836518_31837235_31837436_31839542
transcript_168854.known	chr6	+	1053	4	FSM	ENSG00000204387.14	ENST00000375640.7	1053	4	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_2	191.475556896667	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACGTGGTTTGGTCTCA	NA	False	NA	95	True	AATAAA	-16	NA	31834607	31839761	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31835201_31835410_31835452_31837235_31837436_31839542
transcript_168855.known	chr6	+	610	4	FSM	ENSG00000204387.14	ENST00000375635.6	610	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	289.443527403111	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACGTGGTTTGGTCTCA	NA	False	NA	95	True	AATAAA	-16	NA	31834907	31839761	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31835058_31835410_31835452_31837235_31837436_31839542
transcript_168856.known	chr6	+	2517	1	FSM	ENSG00000204388.7	ENST00000375650.5	2517	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTCTGTTAATATGTG	NA	False	NA	12	True	AATAAA	-13	NA	31827737	31830254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31827700_31830300
transcript_168857.known	chr6	-	1875	6	FSM	ENSG00000204386.12	ENST00000491768.5	1875	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	116.376286244234	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCCCTCTTTTTTTGTTG	-31862794	False	NA	-5	True	NA	NA	NA	31862822	31859051	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31859946_31860041_31860179_31860438_31860622_31861187_31861451_31861998_31862192_31862617
transcript_168859.known	chr6	-	3353	6	FSM	ENSG00000204386.12	ENST00000375631.5	3353	6	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_1	15.7936696179197	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAAGAA	-31862793	False	NA	NA	False	NA	NA	NA	31862821	31857658	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31859946_31860041_31860265_31860438_31860622_31861187_31861451_31861998_31862192_31862617
transcript_168862.known	chr6	-	4616	3	FSM	ENSG00000204386.12	ENST00000495807.1	4616	3	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_1	22.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAAGAA	-31862768	False	NA	NA	False	NA	NA	NA	31862796	31857658	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31859946_31860041_31862192_31862617
transcript_168868.nic	chr6	-	4039	28	NIC	ENSG00000204371.11	novel	3965	28	NA	NA	-50	0	intron_retention	FALSE	canonical	3	104	junction_9	200.927936497877	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGATTTTTGTGTTGGGG	-31892730	True	NA	NA	False	AATAAA	-20	NA	31897737	31879758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_31880265_31880672_31880849_31881013_31881093_31882698_31882786_31882893_31883010_31883361_31883440_31883805_31883951_31884391_31884560_31884644_31884800_31884890_31885017_31886580_31886683_31886774_31886898_31886994_31887102_31887576_31887660_31887778_31887962_31888040_31888277_31888362_31888507_31888598_31888748_31888968_31889071_31889227_31889343_31889467_31889603_31892406_31892563_31892693_31892735_31892825_31892911_31896262_31896517_31896605_31896825_31896922_31896990_31897635
transcript_168876.known	chr6	-	3965	28	FSM	ENSG00000204371.11	ENST00000375537.8	3965	28	0	0	0	0	multi-exon	FALSE	canonical	3	602	junction_19	138.760009340025	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGATTTTTGTGTTGGGG	-31892677	True	NA	NA	False	AATAAA	-20	NA	31897684	31879758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31880265_31880672_31880849_31881013_31881093_31882698_31882786_31882893_31883010_31883361_31883440_31883805_31883951_31884391_31884560_31884644_31884800_31884911_31885017_31886580_31886683_31886774_31886898_31886994_31887102_31887576_31887660_31887778_31887962_31888040_31888277_31888362_31888507_31888598_31888748_31888968_31889071_31889227_31889343_31889467_31889603_31892406_31892563_31892693_31892735_31892825_31892911_31896262_31896517_31896605_31896825_31896922_31896990_31897635
transcript_168885.nic	chr6	-	3937	27	NIC	ENSG00000204371.11	novel	3965	28	NA	NA	-50	0	intron_retention	FALSE	canonical	3	104	junction_9	223.161389844121	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGATTTTTGTGTTGGGG	-31892730	True	NA	NA	False	AATAAA	-20	NA	31897737	31879758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_31880265_31880672_31880849_31881013_31881093_31882698_31882786_31882893_31883010_31883361_31883440_31883805_31883951_31884391_31884560_31884644_31884800_31884890_31885017_31886580_31886683_31886774_31886898_31886994_31887102_31887576_31887660_31887778_31887962_31888040_31888277_31888362_31888507_31888598_31888748_31889227_31889343_31889467_31889603_31892406_31892563_31892693_31892735_31892825_31892911_31896262_31896517_31896605_31896825_31896922_31896990_31897635
transcript_168892.known	chr6	-	3856	27	FSM	ENSG00000204371.11	ENST00000375530.8	3856	27	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_18	167.359762012344	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGATTTTTGTGTTGGGG	-31892670	True	NA	NA	False	AATAAA	-20	NA	31897677	31879758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31880265_31880672_31880849_31881013_31881093_31882698_31882786_31882893_31883010_31883361_31883440_31883805_31883951_31884391_31884560_31884644_31884800_31884911_31885017_31886580_31886683_31886774_31886898_31886994_31887102_31887576_31887660_31887778_31887962_31888040_31888277_31888362_31888507_31888598_31888748_31889227_31889343_31889467_31889603_31892406_31892563_31892693_31892735_31892825_31892911_31896262_31896517_31896605_31896825_31896922_31896990_31897635
transcript_168925.known	chr6	-	2585	21	FSM	ENSG00000204385.13	ENST00000229729.11	2585	21	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_9	3.04795013082563	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGACTCATTCTCTCCA	-31878936	False	NA	-19	True	ATTAAA	-23	NA	31878997	31863191	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31863749_31864651_31864737_31864815_31864911_31865009_31865081_31865314_31865389_31865497_31865602_31865689_31865785_31865872_31866127_31869154_31869258_31869544_31869638_31870602_31870703_31870811_31871048_31871313_31871398_31871473_31871562_31874459_31874521_31874720_31874847_31874928_31875029_31875851_31875931_31876055_31876130_31877033_31877083_31878940
transcript_16893.nnic	chr1	+	3945	9	NNC	ENSG00000213064.10	novel	11040	8	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	24.2998842589836	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATAAATCTAGTGTTGT	168222891	True	NA	7	True	AATAAA	-17	NA	168225952	168253016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_168226143_168231513_168231601_168231833_168231920_168235100_168235183_168236588_168236625_168236711_168236771_168239130_168239161_168242500_168244164_168251304
transcript_16895.known	chr1	+	11040	8	FSM	ENSG00000213064.10	ENST00000271375.7	11040	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_5	9.71638632750397	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATCTAGTGTTGTCTCTT	168222942	True	NA	12	True	AATAAA	-22	NA	168226003	168253021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_168226143_168231513_168231601_168231833_168231920_168235100_168235183_168236588_168236625_168236711_168236771_168239130_168239161_168242500
transcript_168950.nic	chr6	-	999	8	ISM	ENSG00000204371.11	ENST00000375537.8	3965	28	-53	9769	-50	2890	5prime_fragment	FALSE	canonical	3	706	junction_2	92.7599491335852	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGAGGAGGAAGAGGAAGA	-31892730	True	NA	NA	False	NA	NA	NA	31897737	31889527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_31889603_31892406_31892563_31892693_31892735_31892825_31892911_31896262_31896517_31896605_31896825_31896922_31896990_31897635
transcript_168955.known	chr6	-	1454	4	FSM	ENSG00000204371.11	ENST00000465429.1	1454	4	0	0	0	0	multi-exon	FALSE	canonical	3	731	junction_3	112.529502304457	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAAAAAGAT	-31892680	True	NA	NA	False	NA	NA	NA	31897687	31895400	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31896517_31896605_31896825_31896922_31896990_31897635
transcript_168961.known	chr6	-	1517	9	FSM	ENSG00000204371.11	ENST00000478491.5	1517	9	0	0	0	0	multi-exon	TRUE	canonical	3	865	junction_7	89.5110852073641	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGATTTTTGTGTTGGGG	-31884780	False	NA	NA	False	AATAAA	-20	NA	31884806	31879758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31880265_31880672_31880849_31881013_31881093_31882698_31882786_31882893_31883010_31883361_31883440_31883805_31883951_31884391_31884560_31884644
transcript_168962.known	chr6	-	4129	27	FSM	ENSG00000204371.11	ENST00000395728.7	4129	27	0	0	0	0	multi-exon	FALSE	canonical	3	602	junction_19	137.774642336701	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGATTTTTGTGTTGGGG	-31897158	False	NA	NA	False	AATAAA	-20	NA	31897202	31879758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31880265_31880672_31880849_31881013_31881093_31882698_31882786_31882893_31883010_31883361_31883440_31883805_31883951_31884391_31884560_31884644_31884800_31884911_31885017_31886580_31886683_31886774_31886898_31886994_31887102_31887576_31887660_31887778_31887962_31888040_31888277_31888362_31888507_31888598_31888748_31888968_31889071_31889227_31889343_31889467_31889603_31892406_31892563_31892693_31892735_31892825_31892911_31896262_31896517_31896605_31896825_31896922
transcript_168968.known	chr6	-	1445	11	FSM	ENSG00000204356.14	ENST00000375429.8	1445	11	0	0	0	0	multi-exon	TRUE	canonical	3	566	junction_10	98.0909781784237	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTTGTCGCAGCTGTTTT	-31950520	True	NA	-2	True	NA	NA	NA	31958971	31952086	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31952399_31953728_31953832_31954079_31954135_31954297_31954443_31954554_31954893_31955058_31955097_31955218_31955294_31956692_31956839_31956940_31957011_31958371_31958455_31958891
transcript_168972.known	chr6	-	1543	10	FSM	ENSG00000204356.14	ENST00000481121.5	1543	10	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_9	97.2945128063357	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATCTCCCTCAGCCTCTG	-31950511	True	NA	-27	True	AGTAAA	-20	NA	31958962	31952227	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31952399_31953728_31954135_31954297_31954443_31954554_31954893_31955058_31955097_31955218_31955294_31956692_31956839_31956940_31957011_31958371_31958455_31958891
transcript_168980.known	chr6	+	3795	28	FSM	ENSG00000204351.12	ENST00000375394.7	3795	28	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	21.354220741676	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTTGTGTGCTTGAGT	31956291	True	NA	7	True	GATAAA	-9	NA	31959174	31969751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31959215_31959296_31959401_31960009_31960120_31960219_31960338_31960431_31960547_31960665_31960741_31961040_31961095_31961195_31961387_31961546_31961676_31961908_31962055_31962438_31962586_31962713_31962799_31962984_31963092_31963412_31963560_31963636_31963734_31963912_31964126_31964231_31964343_31965782_31966014_31966708_31966847_31967003_31967142_31967272_31967378_31967714_31967863_31967955_31968083_31968327_31968539_31968685_31968797_31968870_31969090_31969279_31969421_31969514
transcript_168988.nic	chr6	+	3925	27	ISM	ENSG00000204351.12	ENST00000375394.7	3795	28	-36	0	-2	0	intron_retention	FALSE	canonical	3	150	junction_1	21.7579816001763	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTTGTGTGCTTGAGT	31956255	True	NA	7	True	GATAAA	-9	NA	31959138	31969751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_31959215_31959296_31959401_31960009_31960120_31960219_31960338_31960431_31960547_31960665_31960741_31961040_31961095_31961195_31961387_31961546_31961676_31961908_31962055_31962438_31962586_31962713_31962799_31962984_31963092_31963412_31963560_31963636_31963734_31963912_31964126_31964231_31964343_31965782_31966014_31966708_31966847_31967003_31967142_31967272_31967378_31967714_31967863_31967955_31968083_31968327_31968539_31968685_31968797_31968870_31969090_31969279
transcript_16901.known	chr1	-	1472	12	FSM	ENSG00000143156.14	ENST00000367811.8	1472	12	0	0	0	0	multi-exon	TRUE	canonical	3	228	junction_10	27.3178414742072	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTTGGTTTATTTCAT	-169364736	True	NA	NA	False	AATAAA	-18	NA	169367797	169132530	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_169132818_169169446_169169555_169230717_169230820_169235130_169235200_169237622_169237688_169287302_169287409_169298555_169298764_169303144_169303196_169309969_169310081_169323116_169323284_169324392_169324501_169367707
transcript_169050.known	chr6	+	1405	7	FSM	ENSG00000204344.16	ENST00000492583.5	1405	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	30.9408036956594	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGGGCTCTCGTGTGTGCA	NA	False	NA	NA	False	NA	NA	NA	31971898	31981164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31972512_31972620_31972758_31978902_31979011_31979413_31979554_31980450_31980549_31980653_31980802_31981003
transcript_169055.known	chr6	-	1469	7	FSM	ENSG00000204348.10	ENST00000337523.10	1469	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	26.2805377925694	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCTCTCGCTGTCTTCTT	NA	False	NA	-5	True	AATAAA	-16	NA	31972138	31969814	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31970025_31970108_31970204_31970342_31970479_31970605_31970826_31970911_31971148_31971319_31971682_31971928
transcript_169056.known	chr6	-	1667	7	FSM	ENSG00000204348.10	ENST00000375349.7	1667	7	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_6	39.4067112163511	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTCGCTGTCTTCTTAG	NA	False	NA	-3	True	AATAAA	-18	NA	31972290	31969812	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31970025_31970108_31970204_31970342_31970479_31970605_31970826_31970911_31971148_31971319_31971726_31971928
transcript_169058.known	chr6	+	1894	6	FSM	ENSG00000204344.16	ENST00000473983.5	1894	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	14.6969384566991	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTGGTTTCTGACCCAG	NA	False	NA	NA	False	NA	NA	NA	31972339	31981209	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31972512_31972620_31972758_31978902_31978999_31979413_31980549_31980653_31980802_31981003
transcript_169059.known	chr6	+	1039	6	FSM	ENSG00000204344.16	ENST00000483801.6	1039	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	33.2686038180144	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACCTCTGCCTGTGATAT	31972014	True	NA	NA	False	NA	NA	NA	31972380	31981429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31972512_31978902_31978999_31979413_31979554_31980450_31980549_31980653_31980802_31981003
transcript_169060.known	chr6	+	1128	6	FSM	ENSG00000204344.16	ENST00000491861.5	1128	6	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	9.17823512446701	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGGATGTCCTTTA	31972188	False	NA	NA	False	AATAAA	-17	NA	31972554	31981446	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31972758_31978902_31978999_31979413_31979554_31980450_31980549_31980653_31980802_31981003
transcript_16907.known	chr1	-	4298	7	FSM	ENSG00000143156.14	ENST00000524967.5	4298	7	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_5	21.6929327969579	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGCAGATATCTTTGCAG	-169364711	True	NA	NA	False	NA	NA	NA	169367772	169283820	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_169287409_169298555_169298764_169303144_169303196_169309969_169310081_169323116_169323284_169324392_169324501_169367707
transcript_169072.known	chr6	+	543	3	FSM	ENSG00000204344.16	ENST00000463823.5	543	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	32.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAGGCCTATCTTACCTG	31972007	True	NA	NA	False	AATAAA	-32	NA	31972373	31979722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31972512_31978902_31978999_31979413
transcript_169073.known	chr6	+	725	3	FSM	ENSG00000204344.16	ENST00000484540.5	725	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	6	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTAGGAGCTGGGATACC	31972211	False	NA	NA	False	NA	NA	NA	31972577	31979862	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_31972758_31978902_31978999_31979413
transcript_169076.known	chr6	-	1474	2	FSM	ENSG00000204348.10	ENST00000492946.1	1474	2	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGGTCCCGAATGTTGT	NA	False	NA	NA	False	NA	NA	NA	31972162	31970441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31971682_31971928
transcript_169077.known	chr6	-	2025	3	FSM	ENSG00000204348.10	ENST00000473976.1	2025	3	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_2	25	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCTCTCGCTGTCTTCTT	NA	False	NA	-5	True	AATAAA	-16	NA	31972095	31969814	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31970025_31970108_31971148_31971319
transcript_169078.known	chr6	-	1533	6	FSM	ENSG00000204348.10	ENST00000375356.7	1533	6	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	28.7847181678056	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGCAGATAATAAAAGCATA	-31971902	True	NA	-34	True	NA	NA	NA	31971984	31969843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_31970025_31970108_31970204_31970342_31970479_31970605_31970826_31970911_31971148_31971319
transcript_169080.known	chr6	-	2626	18	FSM	ENSG00000213676.13	ENST00000375203.8	2626	18	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_7	8.08689828521619	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGCTGCCTTCCTGGCT	-32127983	False	NA	-1	True	AATAAA	-24	NA	32128246	32115263	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32115969_32116479_32116565_32116703_32116816_32117036_32117108_32117322_32117405_32117586_32117695_32117858_32118039_32118774_32118867_32118955_32119142_32119823_32119958_32120770_32120903_32120988_32121125_32121262_32121349_32126116_32126253_32127102_32127195_32127441_32127521_32127670_32127751_32128116
transcript_169081.known	chr6	-	2532	18	FSM	ENSG00000213676.13	ENST00000453203.2	2532	18	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	18.3070693702552	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTGGGGTGGGGGGGAGT	-32126894	True	NA	-89	True	NA	NA	NA	32128217	32115351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32115969_32116479_32116565_32116703_32116816_32117036_32117131_32117322_32117405_32117586_32117695_32117858_32118039_32118774_32118867_32118955_32119142_32119823_32119958_32120770_32120903_32120988_32121125_32121262_32121349_32126116_32126253_32127102_32127195_32127441_32127521_32127670_32127751_32128116
transcript_169083.nic	chr6	-	3261	16	NIC	ENSG00000213676.13	novel	2626	18	NA	NA	10	-5	intron_retention	FALSE	canonical	3	61	junction_5	8.51038581185757	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAATGGTGGCTGCCTTCC	-32127973	False	NA	-6	True	AATAAA	-19	NA	32128236	32115268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_32116816_32117036_32117108_32117322_32117405_32117586_32117695_32117858_32118039_32118774_32118867_32118955_32119142_32119823_32119958_32120770_32120903_32120988_32121125_32121262_32121349_32126116_32126253_32127102_32127195_32127441_32127521_32127670_32127751_32128116
transcript_169084.known	chr6	-	2756	14	FSM	ENSG00000168477.19	ENST00000490077.5	2756	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_13	7.21766406507071	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCATCGGTCCTGCCCCA	NA	False	NA	NA	False	AATAAA	-21	NA	32046607	32041154	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32041451_32041770_32041935_32042011_32042174_32042265_32042363_32042454_32042607_32042698_32042832_32042950_32043082_32043174_32043319_32043436_32043557_32043748_32043893_32044006_32044130_32044380_32044717_32045005_32045327_32046174
transcript_169087.known	chr6	-	1176	8	FSM	ENSG00000213676.13	ENST00000495579.5	1176	8	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	6.18754509363078	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAATAAAAATAAAAA	-32126899	True	NA	NA	False	AAAAAG	-13	NA	32128222	32120441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32120903_32120988_32121125_32121262_32121349_32126116_32126253_32127102_32127195_32127441_32127521_32127670_32127751_32128116
transcript_169089.known	chr6	-	1342	2	FSM	ENSG00000204315.4	ENST00000375156.4	1342	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAACTTGTGAATTGTGG	NA	False	NA	-12	True	ATTAAA	-20	NA	32130288	32128706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32129855_32130094
transcript_16909.known	chr1	+	2216	6	FSM	ENSG00000143153.14	ENST00000367815.9	2216	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	9.68297474952816	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCGTGTGTGATTCACT	169104391	True	NA	13	True	AATAAA	-13	NA	169106689	169132719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_169106927_169111369_169111499_169124883_169125040_169127223_169127409_169130009_169130091_169131291
transcript_1691.known	chr1	-	2816	6	FSM	ENSG00000227372.12	ENST00000648432.1	2816	6	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_1	87.9763604612057	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTGTTTAGTTTTATAA	-3741144	False	NA	-53	True	NA	NA	NA	3746942	3735649	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3736559_3736925_3737104_3740232_3740388_3742803_3742912_3743060_3743191_3745606
transcript_169100.nic	chr6	+	1996	10	NIC	ENSG00000221988.13	novel	2111	10	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	44.2518047340696	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGACTTGGCTCATTTCC	32153295	True	NA	15	True	AATAAA	-15	NA	32153491	32163675	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_32153637_32154195_32154405_32154586_32154778_32155029_32155184_32155687_32155784_32155870_32155979_32157636_32157721_32157839_32157925_32162567_32162623_32162806
transcript_169102.known	chr6	+	1759	9	FSM	ENSG00000221988.13	ENST00000361568.6	1759	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	38.7183338355358	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGGCTCATTTCCAGG	32153326	True	NA	18	True	AATAAA	-18	NA	32153522	32163678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_32153637_32154586_32154778_32155029_32155184_32155687_32155784_32155870_32155979_32157636_32157721_32157839_32157925_32162567_32162623_32162806
transcript_169104.known	chr6	+	1754	9	FSM	ENSG00000221988.13	ENST00000375143.6	1754	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	41.2293508922952	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGGCTCATTTCCAGG	32153941	False	NA	18	True	AATAAA	-18	NA	32154137	32163678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_32154247_32154586_32154778_32155029_32155184_32155687_32155784_32155870_32155979_32157636_32157721_32157839_32157925_32162567_32162623_32162806
transcript_169113.known	chr6	-	2196	7	FSM	ENSG00000204310.13	ENST00000375107.8	2196	7	0	0	0	0	multi-exon	TRUE	canonical	3	237	junction_6	40.3680979652663	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTTGGTGGTTGCA	-32175948	False	NA	-30	True	AATAAA	-13	NA	32176084	32168211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32169449_32169965_32170039_32170164_32170261_32170424_32170601_32170936_32171071_32171296_32171506_32175813
transcript_169114.known	chr6	-	2496	7	FSM	ENSG00000204310.13	ENST00000395499.5	2496	7	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_6	111.211010645929	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTTGGTGGTTGCA	-32177061	False	NA	-30	True	AATAAA	-13	NA	32177080	32168211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32169449_32169965_32170039_32170164_32170261_32170424_32170601_32170936_32171071_32171296_32171506_32176509
transcript_169115.known	chr6	-	2017	7	FSM	ENSG00000204310.13	ENST00000375104.6	2017	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_6	111.952370824978	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTTGGTGGTTGCA	-32177306	False	NA	-30	True	AATAAA	-13	NA	32177325	32168211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32169449_32169965_32170039_32170164_32170261_32170424_32170601_32170936_32171071_32171296_32171506_32177233
transcript_169116.known	chr6	-	2021	7	FSM	ENSG00000204310.13	ENST00000336984.6	2021	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	124.93387139692	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTTGGTGGTTGCA	-32177960	True	NA	-30	True	AATAAA	-13	NA	32178096	32168211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32169449_32169965_32170039_32170164_32170261_32170424_32170601_32170936_32171071_32171296_32171506_32178000
transcript_169122.known	chr6	-	2448	5	FSM	ENSG00000204310.13	ENST00000490711.5	2448	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	159.725545859139	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTTGGTGGTTGCA	-32177323	False	NA	-30	True	AATAAA	-13	NA	32177342	32168211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32169449_32169965_32170039_32170164_32170261_32171296_32171506_32176509
transcript_169127.known	chr6	-	567	3	FSM	ENSG00000284954.1	ENST00000485392.5	567	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAGGTCGACTCAGGAGC	-32154313	False	NA	-4	True	AATAAA	-19	NA	32154333	32152801	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32153173_32153736_32153837_32154237
transcript_169128.known	chr6	+	1117	6	FSM	ENSG00000204308.8	ENST00000375094.4	1117	6	0	0	0	0	multi-exon	FALSE	canonical	3	1789	junction_1	196.574057291393	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGGGATCTCTTCCCAA	NA	False	NA	13	True	AATAAA	-15	NA	32178404	32180793	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_32178652_32179540_32179560_32179650_32179764_32179876_32179932_32180008_32180127_32180228
transcript_16913.known	chr1	+	2300	8	FSM	ENSG00000117475.14	ENST00000329281.6	2300	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	37.2328579924469	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAGGAAGGAAGA	169367583	True	NA	NA	False	NA	NA	NA	169367969	169396540	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_169368343_169369472_169369551_169376539_169376980_169378329_169378530_169380480_169380610_169382061_169382282_169386996_169387210_169395893
transcript_169134.nnic	chr6	+	2000	6	NNC	ENSG00000204308.8	novel	1117	6	NA	NA	-4	3971	intron_retention	FALSE	canonical	1	59	junction_5	749.541353095345	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCATTTTGTTTTTTTTCT	NA	False	NA	NA	False	AAAAAG	-19	NA	32178432	32184764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_32178652_32179540_32179560_32179650_32179764_32179876_32179932_32180008_32180127_32183288
transcript_169138.known	chr6	-	3229	9	FSM	ENSG00000204304.12	ENST00000375050.6	3229	9	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_8	11.7785557264038	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTGAGAATTTTTTTC	-32190178	False	NA	-4	True	AATAAA	-22	NA	32190202	32184732	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32186475_32186603_32186691_32186812_32186902_32187241_32187396_32187646_32187783_32187965_32188157_32188256_32188505_32188722_32188797_32189694
transcript_169142.nnic	chr6	-	2838	8	NNC	ENSG00000204304.12	novel	3229	9	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_7	27.1894337219893	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTGAGAATTTTTTTC	-32190178	False	NA	-4	True	AATAAA	-22	NA	32190202	32184732	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_32186475_32186603_32186691_32186812_32186902_32187241_32187396_32187646_32187783_32187965_32188157_32188256_32188391_32189897
transcript_169152.known	chr6	-	1456	8	FSM	ENSG00000213654.10	ENST00000375043.3	1456	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	41.3096816245099	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGACTGGTATCTGGGG	-32195499	False	NA	0	True	AATAAA	-18	NA	32195523	32190765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32191504_32191708_32191909_32192147_32192251_32192471_32192531_32193040_32193125_32194309_32194391_32194736_32194830_32195425
transcript_169153.known	chr6	-	1417	4	FSM	ENSG00000213654.10	ENST00000472768.5	1417	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	35.3647658929996	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGACTGGTATCTGGGG	-32192861	False	NA	0	True	AATAAA	-18	NA	32192885	32190765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32191504_32191708_32191871_32192147_32192251_32192471
transcript_169154.known	chr6	-	1213	4	FSM	ENSG00000213654.10	ENST00000375040.8	1213	4	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	3.39934634239519	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGACTGGTATCTGGGG	-32192619	False	NA	0	True	AATAAA	-18	NA	32192643	32190765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32191504_32191708_32191909_32192147_32192251_32192471
transcript_169157.known	chr6	-	1460	4	FSM	ENSG00000213654.10	ENST00000487761.5	1460	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	40.6147209217982	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGACTGGTATCTGGGG	-32192844	False	NA	0	True	AATAAA	-18	NA	32192868	32190765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32191504_32191708_32191909_32192147_32192273_32192471
transcript_169158.known	chr6	+	1235	5	FSM	ENSG00000204287.14	ENST00000395388.7	1235	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	2.06155281280883	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGGTGTTTAAGCCAGT	NA	False	NA	25	True	AATAAA	-25	NA	32439886	32445046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_32440033_32442447_32442694_32443184_32443467_32443755_32443922_32444651
transcript_169159.known	chr6	-	1229	6	FSM	ENSG00000196126.11	ENST00000360004.5	1229	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.59090282131363	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCATCTGGTCCATTTGGC	NA	False	NA	-27	True	ATTAAA	-24	NA	32589848	32578768	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32579105_32580246_32580271_32580745_32580857_32581556_32581839_32584108_32584379_32589642
transcript_169160.known	chr6	-	1642	5	FSM	ENSG00000179344.17	ENST00000434651.7	1605	5	-37	0	-10	0	multi-exon	FALSE	canonical	0	0	junction_1	4.60298815988049	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATAGAAGCCCAAATATAT	NA	False	NA	-2	True	AATAAA	-22	NA	32666694	32659466	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32660250_32661346_32661458_32661966_32662249_32664797_32665068_32666498
transcript_169162.known	chr6	-	5643	12	FSM	ENSG00000204267.17	ENST00000374897.4	5643	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	0.88139633771206	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGGAAGTTCCATATT	-32838359	True	NA	-4	True	ATTAAA	-25	NA	32838739	32825414	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32829035_32829399_32829537_32829929_32830090_32830266_32830441_32830617_32830807_32832332_32832462_32832626_32832825_32835153_32835360_32835642_32835774_32837536_32837652_32837740_32838238_32838652
transcript_169165.known	chr6	-	2509	12	FSM	ENSG00000204267.17	ENST00000652259.1	2509	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.935966376453364	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTGTTCTCTAAAAGTAT	-32838359	True	NA	NA	False	ATTAAA	-13	NA	32838739	32821832	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32822319_32829399_32829537_32829929_32830090_32830266_32830441_32830617_32830807_32832332_32832462_32832626_32832825_32835153_32835360_32835642_32835774_32837536_32837652_32837740_32838238_32838652
transcript_16917.known	chr1	+	2524	7	FSM	ENSG00000117475.14	ENST00000367808.8	2524	7	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_6	13.3873904186821	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCGACTATTCCTTTTTTC	169367060	True	NA	24	True	AATAAA	-18	NA	169368194	169388305	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_169368343_169369472_169369551_169376539_169376980_169378329_169378530_169380480_169380610_169382061_169382282_169386996
transcript_169170.known	chr6	-	2685	11	FSM	ENSG00000168394.12	ENST00000354258.5	2685	11	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	13.2453765518388	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGTTTCTTATGTTTCC	NA	False	NA	-9	True	AATAAA	-15	NA	32853704	32845208	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32845786_32847067_32847205_32847512_32847676_32847918_32848093_32848651_32848841_32848989_32849119_32850319_32850518_32850943_32851150_32852108_32852240_32852387_32852503_32853038
transcript_169176.known	chr6	+	1017	6	FSM	ENSG00000240065.8	ENST00000374859.3	1017	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	4.17612260356422	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGTGATGGGACTCTTT	32854119	False	NA	NA	False	NA	NA	NA	32854191	32859851	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_32854290_32856137_32856206_32857262_32857395_32858004_32858135_32858363_32858506_32859404
transcript_169178.known	chr6	-	1124	6	FSM	ENSG00000204264.12	ENST00000374882.8	1124	6	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_5	34.9937137211814	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTCTTGTGGCTGAAT	-32843766	False	NA	NA	False	AATAAA	-19	NA	32844047	32840716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32841048_32841530_32841736_32842133_32842264_32842671_32842784_32842941_32843090_32843849
transcript_169179.known	chr6	-	1327	6	FSM	ENSG00000204264.12	ENST00000374881.3	1327	6	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_5	33.8502584923661	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTCTTGTGGCTGAAT	NA	False	NA	NA	False	AATAAA	-19	NA	32844679	32840716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32841048_32841530_32841736_32842133_32842264_32842671_32842784_32842941_32843090_32844278
transcript_169180.known	chr6	-	1153	5	FSM	ENSG00000204264.12	ENST00000484003.1	1153	5	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_4	37.6654682700215	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAGTAGAAAGTACAGAT	NA	False	NA	NA	False	NA	NA	NA	32844651	32841020	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32841048_32841530_32841736_32842133_32842264_32842671_32843090_32844278
transcript_169182.known	chr6	+	1015	2	FSM	ENSG00000204261.9	ENST00000412095.1	1015	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGCCTGCTCCACCAGGC	NA	False	NA	NA	False	NA	NA	NA	32844133	32845695	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_32844871_32845417
transcript_169183.known	chr6	-	2170	11	FSM	ENSG00000168394.12	ENST00000645078.1	2170	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	30.5901945073908	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTAGGTTCTTGATATTT	NA	False	NA	-51	True	CATAAA	-4	NA	32852787	32845250	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32845786_32847067_32847205_32847512_32847676_32847918_32848093_32848651_32848841_32848989_32849119_32850319_32850518_32850943_32851150_32852108_32852240_32852387_32852503_32852594
transcript_169184.known	chr6	+	1338	2	FSM	ENSG00000204261.9	ENST00000415067.2	1338	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTCTTTTCCTTATGTT	NA	False	NA	6	True	AATAAA	-13	NA	32844100	32846493	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_32844275_32845329
transcript_169185.nnic	chr6	+	838	2	FSM	ENSG00000289047.1	ENST00000685247.1	1136	2	-501	799	-501	-799	multi-exon	FALSE	canonical	3	86	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACGTTGAAGGCTGGTGCA	NA	False	NA	NA	False	AATAAA	-6	NA	32894258	32900989	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_32895027_32900919
transcript_169186.nnic	chr6	+	1646	2	FSM	ENSG00000289047.1	ENST00000685247.1	1136	2	-501	-9	-501	9	multi-exon	FALSE	canonical	3	86	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTGAACCCTAATGTAAAC	NA	False	NA	22	True	AATAAA	-28	NA	32894258	32901797	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_32895027_32900919
transcript_169187.nnic	chr6	+	2829	2	FSM	ENSG00000289047.1	ENST00000685247.1	1136	2	-15	-1678	-15	1678	multi-exon	FALSE	canonical	3	86	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCTGTGATATTCTGTTA	NA	False	NA	7	True	AATAAA	-18	NA	32894744	32903466	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_32895027_32900919
transcript_169188.nnic	chr6	+	3130	2	FSM	ENSG00000289047.1	ENST00000685247.1	1136	2	-24	-1970	-24	1970	multi-exon	FALSE	canonical	3	86	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTTTTTCTTCCTCTTT	NA	False	NA	5	True	AATAAA	-16	NA	32894735	32903758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_32895027_32900919
transcript_16919.nic	chr1	-	1278	3	ISM	ENSG00000117477.13	ENST00000491570.2	1652	4	0	2577	0	0	5prime_fragment	TRUE	canonical	0	0	junction_2	28.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAACCTAAGTGGGCAT	-169427173	True	NA	NA	False	AAGAAA	-24	NA	169427474	169421362	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_169422314_169424810_169424951_169427287
transcript_169190.nnic	chr6	+	407	2	NNC	ENSG00000289047.1	novel	1136	2	NA	NA	-19	-649	at_least_one_novel_splicesite	FALSE	canonical	3	159	junction_1	0	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCACCTTCAGTATTTC	NA	False	NA	NA	False	AAAACA	-12	NA	32894740	32901139	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_32894928_32900919
transcript_169191.nnic	chr6	+	1061	2	NNC	ENSG00000289047.1	novel	1136	2	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	3	159	junction_1	0	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCACAAAGAGTGAACCCT	NA	False	NA	13	True	AATAAA	-19	NA	32894735	32901788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_32894928_32900919
transcript_169192.nnic	chr6	+	1312	2	NNC	ENSG00000289047.1	novel	1136	2	NA	NA	-31	244	at_least_one_novel_splicesite	FALSE	canonical	3	159	junction_1	0	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTATGATTGCCTTTTTAT	NA	False	NA	NA	False	TATAAA	-29	NA	32894728	32902032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_32894928_32900919
transcript_169193.nnic	chr6	+	1425	2	NNC	ENSG00000289047.1	novel	1136	2	NA	NA	-19	369	at_least_one_novel_splicesite	FALSE	canonical	3	159	junction_1	0	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATTGTTACCTTGAATT	NA	False	NA	NA	False	ATTAAA	-12	NA	32894740	32902157	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_32894928_32900919
transcript_169194.nnic	chr6	+	2729	2	NNC	ENSG00000289047.1	novel	1136	2	NA	NA	-15	1677	at_least_one_novel_splicesite	FALSE	canonical	3	159	junction_1	0	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTCTGTGATATTCTGTT	NA	False	NA	6	True	AATAAA	-17	NA	32894744	32903465	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_32894928_32900919
transcript_169195.nnic	chr6	+	3355	2	NNC	ENSG00000289047.1	novel	1136	2	NA	NA	-349	1969	at_least_one_novel_splicesite	FALSE	canonical	3	159	junction_1	0	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTCTTTTTCTTCCTCTT	NA	False	NA	4	True	AATAAA	-15	NA	32894410	32903757	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_32894928_32900919
transcript_16920.known	chr1	-	1246	3	FSM	ENSG00000117477.13	ENST00000456107.1	1246	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	28.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAACCTAAGTGGGCAT	-169427161	True	NA	NA	False	AAGAAA	-24	NA	169427462	169421362	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_169422314_169424810_169424931_169427287
transcript_169200.known	chr6	+	4282	14	FSM	ENSG00000204256.14	ENST00000679179.1	4282	14	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	231.132048121067	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTAAGGGCCCTGTTTT	NA	False	NA	NA	False	NA	NA	NA	32968898	32981040	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_32969057_32971594_32972928_32974461_32974766_32975020_32975113_32975383_32975522_32976030_32976170_32976249_32976465_32976561_32976937_32977441_32977571_32977756_32978006_32978125_32978389_32979827_32980133_32980341_32980465_32980581
transcript_169205.known	chr6	+	4312	14	FSM	ENSG00000204256.14	ENST00000677085.1	4312	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	237.579908699687	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTAAGGGCCCTGTTTT	32970189	False	NA	NA	False	NA	NA	NA	32970245	32981040	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_32970434_32971594_32972928_32974461_32974766_32975020_32975113_32975383_32975522_32976030_32976170_32976249_32976465_32976561_32976937_32977441_32977571_32977756_32978006_32978125_32978389_32979827_32980133_32980341_32980465_32980581
transcript_169206.known	chr6	+	4956	13	FSM	ENSG00000204256.14	ENST00000374825.9	4956	13	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	170.224280158723	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTCCTTAGAAGTAATC	NA	False	NA	25	True	AATAAA	-21	NA	32968593	32981501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_32969057_32971594_32972928_32974461_32974766_32975383_32975522_32976030_32976170_32976249_32976465_32976561_32976937_32977441_32977571_32977756_32978006_32978125_32978389_32979827_32980133_32980341_32980465_32980581
transcript_169208.known	chr6	+	4579	13	FSM	ENSG00000204256.14	ENST00000449085.4	4579	13	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	174.956105606203	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTCCTTAGAAGTAATC	32969209	False	NA	25	True	AATAAA	-21	NA	32969266	32981501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_32969353_32971594_32972928_32974461_32974766_32975383_32975522_32976030_32976170_32976249_32976465_32976561_32976937_32977441_32977571_32977756_32978006_32978125_32978389_32979827_32980133_32980341_32980465_32980581
transcript_169209.known	chr6	+	4798	13	FSM	ENSG00000204256.14	ENST00000678250.1	4798	13	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	177.100469759086	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTCCTTAGAAGTAATC	32969392	False	NA	25	True	AATAAA	-21	NA	32969448	32981501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_32969754_32971594_32972928_32974461_32974766_32975383_32975522_32976030_32976170_32976249_32976465_32976561_32976937_32977441_32977571_32977756_32978006_32978125_32978389_32979827_32980133_32980341_32980465_32980581
transcript_16922.known	chr1	-	3371	6	FSM	ENSG00000117479.15	ENST00000646596.1	3371	6	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_3	58.3280378548773	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGCAAGTTGTACTGTA	-169483615	True	NA	NA	False	NA	NA	NA	169485941	169464047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_169465978_169468110_169468253_169468643_169468738_169469963_169470187_169477154_169477758_169485562
transcript_169227.nic	chr6	+	3531	10	ISM	ENSG00000204256.14	ENST00000374825.9	4956	13	-108	3298	-108	0	5prime_fragment	FALSE	canonical	3	45	junction_1	154.586185957507	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAAAAAGAAGAAACGGAA	NA	False	NA	34	True	NA	NA	NA	32968485	32978203	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_32969057_32971594_32972928_32974461_32974766_32975383_32975522_32976030_32976170_32976249_32976465_32976561_32976937_32977441_32977571_32977756_32978006_32978125
transcript_16924.known	chr1	-	3612	6	FSM	ENSG00000117479.15	ENST00000236137.10	3612	6	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_3	6.34350061086148	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTAAATTTATCTTCT	-169483618	True	NA	4	True	AATAAA	-35	NA	169485944	169463908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_169465978_169468110_169468253_169468643_169468837_169469963_169470187_169477154_169477758_169485562
transcript_169252.known	chr6	-	1007	5	FSM	ENSG00000204257.15	ENST00000395303.7	1007	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	26.0240273593462	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTCTTTCTTAACT	NA	False	NA	0	True	AATAAA	-19	NA	32953108	32948612	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32948869_32949270_32949400_32949610_32949788_32950518_32950804_32952948
transcript_169253.known	chr6	-	1093	5	FSM	ENSG00000204257.15	ENST00000374843.9	1093	5	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	6.09815545882523	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCAGTGTGGCTTCTTTCT	NA	False	NA	-5	True	AATAAA	-14	NA	32953097	32948617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32948869_32949270_32949400_32949610_32949890_32950518_32950804_32952948
transcript_169256.known	chr6	-	1735	4	FSM	ENSG00000204257.15	ENST00000477541.1	1735	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	31.2018517968975	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTCTTTCTTAACT	NA	False	NA	0	True	AATAAA	-19	NA	32953108	32948612	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32948869_32949273_32949400_32949610_32950804_32952948
transcript_169257.known	chr6	-	1348	6	FSM	ENSG00000242574.9	ENST00000418107.3	1348	6	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_2	2.28035085019828	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTTTTCCATGTCTTC	NA	False	NA	-7	True	AATAAA	-13	NA	32941028	32934635	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_32934988_32935341_32935378_32935535_32935653_32937171_32937457_32938683_32938966_32940752
transcript_169258.known	chr6	+	2338	9	FSM	ENSG00000204256.14	ENST00000607833.5	2338	9	0	0	0	0	multi-exon	FALSE	canonical	3	461	junction_5	38.5176501749523	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAAAAAGAAGAAACGGAA	32972162	False	NA	34	True	NA	NA	NA	32972216	32978203	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_32972928_32974461_32974766_32975383_32975522_32976030_32976170_32976249_32976465_32976561_32976937_32977441_32977571_32977756_32978006_32978125
transcript_169259.known	chr6	+	3404	10	FSM	ENSG00000204256.14	ENST00000495733.5	3404	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_7	205.156369149167	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAGAAAAAGAAGAA	32970827	False	NA	28	True	NA	NA	NA	32970929	32978197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_32971198_32971594_32972928_32974461_32974766_32975383_32975522_32976030_32976170_32976249_32976465_32976561_32976937_32977259_32977571_32977756_32978006_32978125
transcript_169261.nnic	chr6	-	3170	6	NNC	ENSG00000204252.14	novel	3464	5	NA	NA	-20	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.3620275313686	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTTTTTTTTTACTGTT	NA	False	NA	NA	False	ATTAAA	-25	NA	33009611	33004177	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_33005391_33005708_33006842_33007079_33007216_33007310_33007593_33008012_33008262_33009454
transcript_169266.nnic	chr6	-	3244	6	NNC	ENSG00000204252.14	novel	3464	5	NA	NA	-20	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.3620275313686	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTTTTTTTTTACTGTT	NA	False	NA	NA	False	ATTAAA	-25	NA	33009611	33004177	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_33005488_33005731_33006842_33007079_33007216_33007310_33007593_33008012_33008262_33009454
transcript_16927.known	chr1	-	2976	5	FSM	ENSG00000117479.15	ENST00000367804.4	2976	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	68.1922832877738	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCTCTTTTTAATCAAAA	-169483605	True	NA	-16	True	AATAAA	-15	NA	169485931	169463928	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_169465978_169468110_169468253_169468643_169468837_169469963_169470187_169485562
transcript_169271.known	chr6	-	3464	5	FSM	ENSG00000204252.14	ENST00000229829.7	3464	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	6.98212002188447	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATATGCTTTTTTTTTAC	-33009430	True	NA	NA	False	ATTAAA	-21	NA	33009591	33004181	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33006842_33007079_33007216_33007310_33007593_33008012_33008262_33009454
transcript_169280.nic	chr6	+	1118	6	NIC	ENSG00000223865.11	novel	1361	5	NA	NA	-57	-432	combination_of_known_junctions	FALSE	canonical	3	58	junction_1	26.3696795581592	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGACTGTTTGTTTTCCTT	NA	False	NA	15	True	NA	NA	NA	33080328	33086769	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_33080535_33080671_33080936_33084949_33085232_33085778_33085890_33086218_33086243_33086538
transcript_169281.nic	chr6	+	1224	6	NIC	ENSG00000223865.11	novel	1361	5	NA	NA	-57	-326	combination_of_known_junctions	FALSE	canonical	3	58	junction_1	26.3696795581592	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAACATAGGAAAGAAGAG	NA	False	NA	4	True	AATAAA	-16	NA	33080328	33086875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_33080535_33080671_33080936_33084949_33085232_33085778_33085890_33086218_33086243_33086538
transcript_169282.nic	chr6	-	1458	6	NIC	ENSG00000231389.8	novel	1704	6	NA	NA	-95	-9	combination_of_known_junctions	FALSE	canonical	1	2	junction_5	12.0233106921513	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCGGGGAGACTCTGAGTC	NA	False	NA	-9	True	AATAAA	-16	NA	33080870	33065015	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_33065348_33068637_33068805_33069018_33069301_33069640_33069887_33073470_33073711_33080679
transcript_169284.nic	chr6	-	1198	5	NIC	ENSG00000231389.8	novel	1704	6	NA	NA	-75	-9	combination_of_known_junctions	FALSE	canonical	3	9	junction_4	10.3047319227625	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCGGGGAGACTCTGAGTC	NA	False	NA	-9	True	AATAAA	-16	NA	33080850	33065015	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_33065348_33068637_33068805_33069018_33069301_33069640_33069887_33080679
transcript_169285.known	chr6	+	3991	6	FSM	ENSG00000223865.11	ENST00000418931.7	3991	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	46.4172381772117	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATGGAGGACCTACTG	NA	False	NA	NA	False	AATAAA	-24	NA	33075989	33089696	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33076142_33080671_33080936_33084949_33085232_33085778_33085890_33086218_33086243_33086538
transcript_169298.nnic	chr6	+	641	3	FSM	ENSG00000224557.8	ENST00000692641.1	727	3	4	82	4	-82	multi-exon	FALSE	canonical	3	19	junction_1	42.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTGTAATACTGGTTTG	NA	False	NA	6	True	NA	NA	NA	33116747	33118699	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33116833_33116973_33117221_33118390
transcript_169304.nnic	chr6	-	1142	3	Antisense	novelGene_ENSG00000224557.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	14	junction_2	4	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTCACGTGTGTCTGTG	NA	False	NA	-4	True	ATTAAA	-19	NA	33124552	33117822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr6_-_33118580_33119618_33119766_33124314
transcript_16931.known	chr1	+	4011	25	FSM	ENSG00000000460.17	ENST00000359326.9	4011	25	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	46.6574209591096	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGCATTGCTACATTTTT	169792106	True	NA	NA	False	AATAAA	-27	NA	169795039	169854080	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_169795116_169795828_169795984_169798856_169798959_169800882_169800972_169802620_169802726_169803168_169803310_169804074_169804241_169806003_169806089_169807790_169807930_169821678_169821760_169823407_169823473_169827050_169827200_169827710_169827841_169829262_169829450_169830258_169830342_169830695_169830748_169832416_169832507_169836926_169837113_169842416_169842540_169843673_169843770_169847689_169847804_169849499_169849605_169850264_169850346_169851816_169851937_169852789
transcript_169319.known	chr6	-	1194	5	FSM	ENSG00000204248.12	ENST00000395194.1	1194	5	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_2	5.24404424085076	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGCTGGGAGCTGTGT	-33192127	False	NA	NA	False	AATAAA	-19	NA	33192454	33186444	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33186819_33188361_33188525_33188977_33189189_33189319_33189470_33192158
transcript_169324.nnic	chr6	-	2802	10	NNC	ENSG00000204231.11	novel	2885	10	NA	NA	-20	0	at_least_one_novel_splicesite	TRUE	canonical	2	6	junction_8	27.631615458375	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGGTGACTGTATGAGGA	NA	False	NA	-3	True	ATTAAA	-17	NA	33200685	33193587	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_33194830_33194944_33195051_33195362_33195455_33195569_33195703_33195906_33196037_33196433_33196607_33197761_33197942_33198307_33198362_33199168_33199417_33200241
transcript_169327.known	chr6	-	2846	10	FSM	ENSG00000204231.11	ENST00000374685.8	2846	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	22.6459600408735	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGGTGACTGTATGAGGA	NA	False	NA	-3	True	ATTAAA	-17	NA	33200614	33193587	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33194830_33194944_33195051_33195362_33195467_33195569_33195703_33195906_33196037_33196433_33196607_33197761_33197942_33198307_33198465_33199168_33199417_33200241
transcript_16933.nic	chr1	+	2918	24	NIC	ENSG00000000460.17	novel	4011	25	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	39.1651054133854	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATCTAGTGAAAATAATCT	169792085	True	NA	8	True	TATAAA	-18	NA	169795018	169853085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_169795214_169798918_169798959_169800882_169800972_169802620_169802726_169803168_169803310_169804074_169804241_169806003_169806089_169807790_169807930_169821678_169821760_169823407_169823473_169827050_169827200_169827710_169827841_169829262_169829450_169830258_169830342_169830695_169830748_169832416_169832507_169836926_169837113_169842416_169842540_169843673_169843770_169847689_169847804_169849499_169849605_169850264_169850346_169851816_169851937_169852789
transcript_169333.known	chr6	-	1977	9	FSM	ENSG00000204231.11	ENST00000483281.5	1977	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	30.0974978195863	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGCAGATGGGGGCCTC	NA	False	NA	NA	False	NA	NA	NA	33200637	33194219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33194830_33194944_33195051_33195362_33195455_33195569_33195703_33195906_33196037_33196433_33196607_33197761_33197942_33198307_33198465_33200241
transcript_169347.known	chr6	+	2153	8	FSM	ENSG00000112473.18	ENST00000374675.7	2153	8	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_1	69.8400504944063	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGTCTTTGTCTTTTTGG	33194251	True	NA	24	True	AATAAA	-24	NA	33200825	33204439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33200939_33201241_33201657_33201744_33201914_33202071_33202126_33202262_33202428_33202559_33202701_33202909_33203107_33203540
transcript_169360.known	chr6	+	2413	7	FSM	ENSG00000112473.18	ENST00000374677.8	2413	7	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_3	19.4543625498813	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCAGTCTTTGTCTTTTT	33194292	True	NA	22	True	AATAAA	-22	NA	33200866	33204437	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33201657_33201744_33201914_33202071_33202126_33202262_33202428_33202559_33202701_33202909_33203107_33203540
transcript_169370.known	chr6	+	1015	5	FSM	ENSG00000112473.18	ENST00000444757.5	1015	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	165.53322929249	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTTAGGTAAGGGCCAGA	NA	False	NA	NA	False	AAAAAG	-1	NA	33200444	33202692	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33200939_33201744_33201914_33202071_33202126_33202262_33202428_33202559
transcript_169375.known	chr6	+	977	9	FSM	ENSG00000204228.4	ENST00000374662.4	977	9	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	15.1575063912241	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGCTCTTCTTGTGTC	33204191	True	NA	23	True	AATAAA	-23	NA	33204654	33206831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33204721_33204901_33205120_33205220_33205338_33205446_33205540_33205639_33205726_33205827_33205913_33206133_33206177_33206374_33206450_33206637
transcript_169380.known	chr6	+	1741	7	FSM	ENSG00000204227.5	ENST00000374656.5	1741	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	11.146748404804	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCAGTTCTGTGTGTCTG	33203672	True	NA	27	True	NA	NA	NA	33208499	33212716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33208645_33208764_33208901_33209625_33209787_33209914_33210131_33211157_33211548_33211728_33212003_33212297
transcript_169391.nic	chr6	+	1303	3	ISM	ENSG00000204227.5	ENST00000374656.5	1741	7	-13	2082	-13	-2082	intron_retention	FALSE	canonical	3	30	junction_2	2.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGTTTACCCCATGACTT	33208023	False	NA	NA	False	AAAAAG	-7	NA	33208486	33210634	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_33208645_33208764_33208901_33209625
transcript_169394.known	chr6	-	2936	20	FSM	ENSG00000223501.9	ENST00000445902.3	2936	20	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_10	23.4143692415706	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTATCCCATTTCCTTTC	-33271864	False	NA	-6	True	AATAAA	-18	NA	33271876	33250277	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33250988_33251517_33251637_33251859_33251972_33263483_33263550_33263771_33263880_33264007_33264104_33264373_33264498_33264781_33264901_33266556_33266713_33267187_33267322_33267681_33267740_33267864_33267998_33268107_33268209_33268498_33268650_33269013_33269190_33269489_33269558_33269743_33269820_33269998_33270052_33270198_33270284_33271585
transcript_169399.known	chr6	+	685	7	FSM	ENSG00000231500.7	ENST00000476222.5	685	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	13058.9644008329	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTCCTTTCTGTCCA	33029982	True	NA	6	True	AATAAA	-19	NA	33272095	33276510	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33272123_33272627_33272727_33275499_33275658_33275796_33275884_33275964_33276067_33276175_33276268_33276390
transcript_169400.known	chr6	+	549	6	FSM	ENSG00000231500.7	ENST00000439602.7	549	6	0	0	0	0	multi-exon	FALSE	canonical	3	23596	junction_1	3008.26046744626	10244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTCCTTTCTGTCCAT	33029961	True	NA	7	True	AATAAA	-20	NA	33272074	33276511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33272123_33272627_33272727_33275796_33275884_33275964_33276067_33276175_33276268_33276390
transcript_169401.known	chr6	+	589	6	FSM	ENSG00000231500.7	ENST00000474973.5	589	6	0	0	0	0	multi-exon	TRUE	canonical	3	66	junction_1	11671.6896737362	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTCCTTTCTGTCCA	33029961	True	NA	6	True	AATAAA	-19	NA	33272074	33276510	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33272123_33272586_33272727_33275796_33275884_33275964_33276067_33276175_33276268_33276390
transcript_169403.known	chr6	+	642	5	FSM	ENSG00000231500.7	ENST00000496813.5	642	5	0	0	0	0	multi-exon	FALSE	canonical	3	23596	junction_1	2990.1821014781	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCTTCCTGTCCTTTCT	33029985	True	NA	1	True	AATAAA	-14	NA	33272098	33276505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33272123_33272627_33272727_33275796_33275884_33275964_33276067_33276175
transcript_169405.known	chr6	+	639	5	FSM	ENSG00000231500.7	ENST00000474626.5	639	5	0	0	0	0	multi-exon	FALSE	canonical	3	23596	junction_1	3308.74730827242	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCTTCCTGTCCTTTCT	33029974	True	NA	1	True	AATAAA	-14	NA	33272087	33276505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33272123_33272627_33272727_33275796_33275884_33275964_33276268_33276390
transcript_169415.known	chr6	+	996	5	FSM	ENSG00000231500.7	ENST00000490191.5	996	5	0	0	0	0	multi-exon	FALSE	canonical	3	24942	junction_4	2461.27786931911	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTCCTTTCTGTCCA	33030018	False	NA	6	True	AATAAA	-19	NA	33272131	33276510	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33272727_33275796_33275884_33275964_33276067_33276175_33276268_33276390
transcript_169416.known	chr6	+	413	3	FSM	ENSG00000231500.7	ENST00000479802.1	413	3	0	0	0	0	multi-exon	FALSE	canonical	3	24942	junction_2	1917	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTCCTTTCTGTCCA	33273525	True	NA	6	True	AATAAA	-19	NA	33275865	33276510	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33276067_33276175_33276268_33276390
transcript_16942.known	chr1	+	782	6	FSM	ENSG00000000460.17	ENST00000496973.5	782	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	77.9779456000221	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGATTTAAATCTTACCAAA	169792109	True	NA	NA	False	ATTAAA	-2	NA	169795042	169804347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_169795214_169798918_169798959_169800882_169800972_169802620_169802726_169803168_169803310_169804111
transcript_169424.known	chr6	-	2070	15	FSM	ENSG00000227057.10	ENST00000374617.9	2070	15	0	0	0	0	multi-exon	FALSE	canonical	3	597	junction_13	55.6996775720709	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTGTCTGGATCATCTT	-33280953	True	NA	-6	True	ATTAAA	-21	NA	33289239	33279107	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33279375_33279496_33279611_33279763_33279860_33280427_33280523_33280673_33280988_33286794_33286895_33287090_33287227_33287354_33287506_33287613_33287719_33287964_33288027_33288147_33288236_33288357_33288471_33288613_33288695_33288803_33289014_33289101
transcript_16943.known	chr1	-	1462	2	FSM	ENSG00000171806.12	ENST00000310392.5	1462	2	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGTGTTTGATTTCTGT	-169793756	True	NA	-12	True	AATAAA	-16	NA	169794907	169792528	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_169793898_169794814
transcript_169437.nic	chr6	-	2202	14	NIC	ENSG00000227057.10	novel	2070	15	NA	NA	-2	0	intron_retention	FALSE	canonical	3	597	junction_12	53.7107087710299	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTGTCTGGATCATCTT	-33288539	False	NA	-6	True	ATTAAA	-21	NA	33289249	33279107	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_33279611_33279763_33279860_33280427_33280523_33280673_33280988_33286794_33286895_33287090_33287227_33287354_33287506_33287613_33287719_33287964_33288027_33288147_33288236_33288357_33288471_33288613_33288695_33288803_33289014_33289101
transcript_16944.known	chr1	-	850	2	FSM	ENSG00000171806.12	ENST00000454472.1	850	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGCTGGGAAAAAAGTCT	-169793812	True	NA	NA	False	NA	NA	NA	169794963	169793141	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_169793898_169794869
transcript_169455.known	chr6	+	1703	1	FSM	ENSG00000235863.4	ENST00000451237.3	1703	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGAGTGCAGTGTGGTCTT	33277036	False	NA	15	True	AATAAA	-15	NA	33277122	33278825	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33277100_33278800
transcript_169461.known	chr6	-	2687	17	FSM	ENSG00000237441.10	ENST00000437840.6	2687	17	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_16	73.0534639408016	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCTGTCCTTGCAGTAC	-33298220	True	NA	-1	True	AATAAA	-23	NA	33298930	33291653	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33292314_33292429_33292545_33293015_33293307_33293412_33293525_33293603_33293700_33293794_33293917_33294033_33294067_33294687_33294763_33294976_33295046_33295126_33295212_33295318_33295423_33295507_33295760_33296027_33296326_33296413_33296465_33296597_33296777_33297031_33297116_33298869
transcript_169471.known	chr6	+	884	5	FSM	ENSG00000204220.12	ENST00000395131.5	884	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	110.020452644043	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTTCCTGACCAGGCA	NA	False	NA	24	True	AATAAA	-17	NA	33289301	33290933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33289621_33289769_33289921_33290173_33290245_33290325_33290451_33290715
transcript_169472.known	chr6	+	521	5	FSM	ENSG00000204220.12	ENST00000374610.6	521	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	131.142098503875	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGGGGAGGGGAGGGAAT	33285734	True	NA	-47	True	GGGGCT	-33	NA	33289596	33290862	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33289629_33289774_33289921_33290173_33290245_33290325_33290451_33290715
transcript_169474.known	chr6	+	805	4	FSM	ENSG00000204220.12	ENST00000395134.3	805	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	130.573946695179	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAATGAGGCAGCTCTAG	33285733	True	NA	-34	True	NA	NA	NA	33289595	33290875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33289629_33289769_33289921_33290173_33290245_33290325
transcript_169475.known	chr6	+	734	4	FSM	ENSG00000204220.12	ENST00000374606.10	734	4	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_3	30.4667396060396	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTTCCTGACCAGGCA	33285738	True	NA	24	True	AATAAA	-17	NA	33289600	33290933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33289921_33290173_33290245_33290325_33290451_33290715
transcript_169478.known	chr6	+	989	2	FSM	ENSG00000204220.12	ENST00000491382.1	989	2	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGGGAGGGAATGAGGCA	33285764	False	NA	-41	True	GGGGCT	-39	NA	33289626	33290868	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33289921_33290173
transcript_169479.known	chr6	-	2896	18	FSM	ENSG00000237441.10	ENST00000497454.6	2896	18	0	0	0	0	multi-exon	TRUE	canonical	3	106	junction_17	60.3913419858444	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCTGTCCTTGCAGTAC	-33298232	True	NA	-1	True	AATAAA	-23	NA	33298942	33291653	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33292314_33292429_33292545_33293015_33293307_33293412_33293525_33293603_33293700_33293794_33293917_33294033_33294067_33294687_33294763_33294976_33295046_33295126_33295212_33295318_33295423_33295507_33295760_33296027_33296326_33296413_33296465_33296597_33296777_33297031_33297116_33298454_33298652_33298869
transcript_169480.known	chr6	+	1915	4	FSM	ENSG00000204220.12	ENST00000463584.1	1915	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	149.87179706521	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGAGACTTCAGAAATACA	33285912	False	NA	NA	False	NA	NA	NA	33289774	33298401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33289921_33290173_33290245_33290325_33290451_33296828
transcript_169484.nnic	chr6	-	3388	9	NNC	ENSG00000231925.13	novel	3450	8	NA	NA	-64	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	109.673378720636	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTCTCTCATTCCAACCC	-33308568	False	NA	-17	True	AATAAA	-23	NA	33314318	33299693	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_33300402_33300703_33301772_33303954_33303990_33304127_33304218_33304296_33304639_33304988_33305388_33313216_33313478_33313693_33313865_33314004
transcript_16949.known	chr1	-	6308	13	FSM	ENSG00000000457.14	ENST00000367771.11	6308	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	6.08903842071052	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGATAAATCAGTTTTAT	-169893406	True	NA	1	True	ATTAAA	-16	NA	169893896	169849630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_169853773_169854269_169854965_169859040_169859213_169862612_169862798_169864368_169864509_169866895_169866974_169868927_169869040_169870254_169870358_169873695_169873753_169875977_169876092_169878633_169878820_169888675_169888891_169893787
transcript_169492.nnic	chr6	-	3384	9	NNC	ENSG00000231925.13	novel	3450	8	NA	NA	-64	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	109.673378720636	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTCTCTCATTCCAACCC	-33308568	False	NA	-17	True	AATAAA	-23	NA	33314318	33299693	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_33300622_33300927_33301772_33303954_33303990_33304127_33304218_33304296_33304639_33304988_33305388_33313216_33313478_33313693_33313865_33314004
transcript_16950.nic	chr1	-	3065	13	NIC	ENSG00000000457.14	novel	3090	14	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_7	9	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTTATATCTGTTAGA	-169893993	False	NA	5	True	AATAAA	-32	NA	169894007	169853073	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_169853773_169854269_169854965_169859040_169859213_169862612_169862798_169864368_169864509_169866895_169866974_169868927_169869129_169870254_169870358_169873695_169873753_169875977_169876092_169878633_169878820_169888675_169888891_169893787
transcript_169513.known	chr6	-	3450	8	FSM	ENSG00000231925.13	ENST00000434618.7	3450	8	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_6	19.8020819354832	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTCTCTCATTCCAACCC	-33308328	False	5750	-17	True	AATAAA	-23	NA	33314078	33299693	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33301772_33303954_33303990_33304127_33304218_33304296_33304639_33304988_33305388_33313216_33313478_33313693_33313865_33314004
transcript_169520.known	chr6	-	1299	7	FSM	ENSG00000231925.13	ENST00000489157.5	1299	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	122.03471728251	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCACTCACTGCCATCCTG	-33308504	False	NA	-112	True	NA	NA	NA	33314254	33301759	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33301772_33303954_33303990_33304127_33304218_33304296_33304639_33304988_33305388_33313693_33313865_33314004
transcript_169526.nnic	chr6	-	2610	3	NNC	ENSG00000236104.3	novel	2660	2	NA	NA	-18	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	49	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGCTTCCCGATAACC	-33312012	False	5750	-16	True	ATTAAA	-17	NA	33317762	33314419	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_33315085_33315150_33316986_33317652
transcript_169529.known	chr6	-	581	2	FSM	ENSG00000236104.3	ENST00000441117.1	581	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGGCCTCAGCTACCACC	-33312191	False	NA	NA	False	NA	NA	NA	33317941	33316468	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33316986_33317877
transcript_169530.known	chr6	-	2660	2	FSM	ENSG00000236104.3	ENST00000431845.3	2660	2	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	0	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTCCCGATAACCCG	-33311994	False	5750	-14	True	ATTAAA	-19	NA	33317744	33314417	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33316986_33317652
transcript_169535.known	chr6	-	2462	9	FSM	ENSG00000204209.13	ENST00000620164.4	2462	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	340.733033326679	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCACTGTCTTTTTCTTGTC	NA	False	NA	-1	True	AATAAA	-24	NA	33323016	33318558	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33318803_33318996_33319050_33319201_33319220_33319379_33319855_33320010_33320225_33320379_33320592_33320735_33321568_33321718_33321978_33322861
transcript_16954.known	chr1	-	3090	14	FSM	ENSG00000000457.14	ENST00000367772.8	3090	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	11.1535808987027	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTTATATCTGTTAGA	-169893469	True	NA	5	True	AATAAA	-32	NA	169893959	169853073	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_169853773_169854269_169854965_169855795_169855958_169859040_169859213_169862612_169862798_169864368_169864509_169866895_169866974_169868927_169869040_169870254_169870358_169873695_169873753_169875977_169876092_169878633_169878820_169888675_169888891_169893787
transcript_16955.known	chr1	-	2954	20	FSM	ENSG00000075945.13	ENST00000361580.7	2954	20	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_18	6.89453595528961	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGAAAGTCATGTGTTT	-170074587	True	NA	NA	False	ATTAAA	-21	NA	170074695	169921328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_169921782_169954010_169954111_169961045_169961236_169972512_169972599_169978084_169978184_169981971_169982098_169982701_169982868_169983269_169983383_169984581_169984691_169992154_169992256_170016461_170016625_170024417_170024597_170031885_170031985_170034371_170034497_170035453_170035554_170038289_170038432_170039232_170039289_170046711_170046867_170055304_170055437_170074435
transcript_169560.nnic	chr6	-	2500	8	NNC	ENSG00000204209.13	novel	2462	9	NA	NA	-12	0	intron_retention	FALSE	canonical	3	54	junction_7	335.1283031793	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCACTGTCTTTTTCTTGTC	-33317221	True	NA	-1	True	AATAAA	-24	NA	33322971	33318558	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_33318803_33318996_33319220_33319379_33319855_33320010_33320225_33320379_33320592_33320735_33321568_33321718_33321909_33322861
transcript_169563.known	chr6	-	2606	8	FSM	ENSG00000204209.13	ENST00000266000.10	2606	8	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_7	230.127560013031	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGTCTTTTTCTTGTCC	NA	False	NA	0	True	AATAAA	-25	NA	33323010	33318557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33318803_33318996_33319220_33319379_33319855_33320010_33320225_33320379_33320592_33320735_33321568_33321718_33321975_33322861
transcript_169565.known	chr6	-	2558	8	FSM	ENSG00000204209.13	ENST00000374542.10	2558	8	0	0	0	0	multi-exon	FALSE	canonical	3	611	junction_7	141.208775815623	1419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGTCTTTTTCTTGTCC	-33317209	True	NA	0	True	AATAAA	-25	NA	33322959	33318557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33318803_33318996_33319220_33319379_33319855_33320010_33320225_33320379_33320592_33320735_33321568_33321718_33321978_33322861
transcript_169584.known	chr6	-	2355	7	FSM	ENSG00000204209.13	ENST00000414083.6	2355	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	377.244836501001	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCACTGTCTTTTTCTTGTC	NA	False	NA	-1	True	AATAAA	-24	NA	33323016	33318558	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33318803_33318996_33319220_33319379_33319855_33320010_33320225_33320379_33320592_33320735_33321568_33322861
transcript_16962.known	chr1	+	2540	5	FSM	ENSG00000120370.14	ENST00000367763.8	2540	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	19.4036079119323	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATAGTGTCTTTCATTTA	170530724	True	NA	NA	False	AATAAA	-14	NA	170532165	170553834	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_170532285_170539209_170539568_170542490_170542593_170544704_170544846_170552014
transcript_16964.nic	chr1	+	2197	5	FSM	ENSG00000120370.14	ENST00000686870.1	944	5	3	-1256	3	0	multi-exon	FALSE	canonical	3	30	junction_2	28.4341344162259	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGTGAATATCACATTAT	170530683	True	NA	19	True	AATAAA	-21	NA	170532124	170553446	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_170532285_170539209_170539572_170542490_170542593_170544704_170544846_170552014
transcript_169653.nnic	chr6	+	2487	12	NNC	ENSG00000237649.8	novel	2391	11	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_10	177.516755116545	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGCAGATACTTTCATAT	NA	False	NA	44	True	AATAAA	-23	NA	33391790	33409896	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_33391998_33398028_33398167_33398287_33398388_33403313_33403368_33403484_33403536_33403728_33404130_33404851_33405632_33406195_33406487_33406591_33406666_33406799_33406876_33409477_33409542_33409645
transcript_16966.known	chr1	+	2467	7	FSM	ENSG00000120370.14	ENST00000498166.6	2467	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	35.2833766335744	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGTGAATATCACATTAT	170530709	True	NA	19	True	AATAAA	-21	NA	170532150	170553446	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_170532285_170533463_170533652_170536309_170536422_170539209_170539568_170542490_170542593_170544704_170544846_170552014
transcript_169663.known	chr6	+	2391	11	FSM	ENSG00000237649.8	ENST00000428849.7	2391	11	0	0	0	0	multi-exon	TRUE	canonical	3	439	junction_5	23.1216348902927	1088	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGCAGATACTTTCATAT	NA	False	NA	44	True	AATAAA	-23	NA	33391822	33409896	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33391998_33398028_33398167_33398287_33398388_33403313_33403368_33403484_33403536_33403728_33404130_33404851_33405632_33406195_33406487_33406591_33406666_33406799_33406876_33409645
transcript_169689.nnic	chr6	+	2292	15	NIC	ENSG00000112511.18	novel	1099	6	NA	NA	-124	0	combination_of_known_splicesites	FALSE	canonical	3	42	junction_1	27.3552778178142	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGCAGCTCTGAGTCATT	NA	False	NA	8	True	AATAAA	-15	NA	33410274	33416439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_33410506_33412247_33412423_33412507_33412590_33412697_33412794_33413195_33413297_33413408_33413558_33413735_33413832_33414040_33414110_33414242_33414367_33414476_33414545_33414724_33414830_33414954_33415145_33415234_33415330_33415589_33415671_33415809
transcript_16969.known	chr1	+	2303	10	FSM	ENSG00000076258.10	ENST00000367749.4	2303	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	6.08783445857899	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTCCCCACCCAAATC	171314057	True	NA	5	True	AATAAA	-19	NA	171314182	171342084	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_171314414_171316185_171316328_171319817_171319958_171323003_171323193_171324137_171324301_171331639_171331783_171332708_171332909_171334410_171334764_171337355_171337426_171341412
transcript_169690.known	chr6	+	1752	15	FSM	ENSG00000112511.18	ENST00000495509.6	1752	15	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_11	29.0513268515697	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGCAGTACCTGGTT	33411063	True	NA	NA	False	NA	NA	NA	33411125	33416051	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33411216_33412247_33412423_33412507_33412590_33412697_33412794_33413195_33413297_33413408_33413558_33413735_33413832_33414040_33414110_33414242_33414367_33414476_33414545_33414724_33414830_33414965_33415145_33415234_33415330_33415589_33415671_33415809
transcript_1697.known	chr1	-	2529	6	FSM	ENSG00000227372.12	ENST00000636630.1	2529	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	80.2196983290264	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACCATGCTCGGCCTAAA	-3741225	False	NA	NA	False	NA	NA	NA	3747023	3737593	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3738514_3740232_3740388_3742803_3742961_3743060_3743191_3745606_3746187_3746436
transcript_169711.known	chr6	-	855	6	FSM	ENSG00000112514.18	ENST00000488034.6	855	6	0	0	0	0	multi-exon	TRUE	canonical	3	550	junction_5	546.559639929624	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTTTATTTCTCTTTA	-33411845	True	NA	1	True	NA	NA	NA	33418107	33416441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33416777_33416919_33416970_33417096_33417143_33417250_33417311_33417480_33417696_33417958
transcript_169712.known	chr6	-	658	6	FSM	ENSG00000112514.18	ENST00000374484.8	658	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	797.150776202344	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCCTTTTGCCTGTTT	-33411880	True	NA	-18	True	AATAAA	-16	NA	33418142	33416549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33416777_33416919_33416970_33417096_33417143_33417246_33417311_33417480_33417696_33418086
transcript_169713.known	chr6	-	762	6	FSM	ENSG00000112514.18	ENST00000374496.3	762	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	761.892538354327	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCGATACTTCAACGCCTT	-33411808	True	NA	-87	True	NA	NA	NA	33418070	33416618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33416777_33416919_33416970_33417096_33417143_33417250_33417311_33417480_33417817_33417958
transcript_169715.known	chr6	-	822	5	FSM	ENSG00000112514.18	ENST00000440279.7	822	5	0	0	0	0	multi-exon	FALSE	canonical	3	1796	junction_3	71.550681338475	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTGCCTTTTGCCTGT	-33417879	False	6262	-20	True	AATAAA	-14	NA	33417921	33416551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33416777_33416919_33416970_33417096_33417143_33417250_33417311_33417480
transcript_169717.known	chr6	-	562	4	FSM	ENSG00000112514.18	ENST00000479249.5	562	4	0	0	0	0	multi-exon	FALSE	canonical	3	1899	junction_3	36.7423461417477	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTGTTTTTTGTCAT	-33417501	False	44	-10	True	AATAAA	-24	NA	33417543	33416541	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33416777_33416919_33416970_33417096_33417311_33417480
transcript_169718.known	chr6	-	961	4	FSM	ENSG00000112514.18	ENST00000465956.1	961	4	0	0	0	0	multi-exon	FALSE	canonical	3	1796	junction_3	82.4472895585753	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTGCCTTTTGCCTGTT	-33417847	False	NA	-19	True	AATAAA	-15	NA	33417889	33416550	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33416777_33416919_33416970_33417096_33417143_33417250
transcript_169719.known	chr6	+	2073	10	FSM	ENSG00000197283.18	ENST00000479510.2	2073	10	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_1	3.52766841475279	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGCCACAGAG	33420007	False	NA	NA	False	NA	NA	NA	33420069	33439121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33420332_33423476_33423599_33425797_33425904_33432160_33432253_33432684_33432807_33435151_33435306_33435514_33435614_33437667_33438292_33438418_33438564_33438774
transcript_169721.known	chr6	+	2715	2	FSM	ENSG00000213588.6	ENST00000395064.3	2715	2	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_1	0	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACAGTGGACTGGATTGA	NA	False	NA	20	True	AATAAA	-20	NA	33454575	33457544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33454776_33455029
transcript_169722.known	chr6	+	575	2	FSM	ENSG00000213588.6	ENST00000621915.1	575	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAATTAGAAACTTCAGGT	NA	False	NA	NA	False	NA	NA	NA	33454542	33455515	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_33454632_33455029
transcript_169723.known	chr6	-	422	1	FSM	ENSG00000274259.2	ENST00000614205.1	422	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAATGTGGATATATACA	NA	False	NA	NA	False	ATTAAA	-32	NA	33454408	33453986	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33454000_33454400
transcript_169726.nnic	chr6	-	2288	7	NNC	ENSG00000030110.14	novel	2170	6	NA	NA	-7	0	at_least_one_novel_splicesite	TRUE	canonical	3	8	junction_6	199.561533256175	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGACTTAGTTTTTGTAT	-33573208	True	NA	-7	True	AATAAA	-17	NA	33580283	33572551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_33573908_33574033_33574215_33575297_33575442_33575792_33575929_33577534_33577636_33577797_33577909_33580024
transcript_169729.known	chr6	-	2170	6	FSM	ENSG00000030110.14	ENST00000374467.4	2170	6	0	0	0	0	multi-exon	TRUE	canonical	3	434	junction_3	48.0183298335125	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGACTTAGTTTTTGTAT	-33573201	True	NA	-7	True	AATAAA	-17	NA	33580276	33572551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33573908_33574033_33574215_33575297_33575442_33575792_33575929_33577534_33577636_33580024
transcript_16973.nic	chr1	+	1481	7	ISM	ENSG00000076258.10	ENST00000367749.4	2303	10	-34	8937	-34	0	5prime_fragment	TRUE	canonical	2	7	junction_4	5.99073358520381	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCCTGCTGTTACAAATA	171314023	True	NA	2	True	AATAAA	-15	NA	171314148	171333147	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_171314414_171316185_171316328_171319817_171319958_171323003_171323193_171324137_171324301_171331639_171331783_171332708
transcript_169739.nic	chr6	+	2222	7	ISM	ENSG00000096433.11	ENST00000605930.3	9079	58	0	35783	0	-35783	5prime_fragment	FALSE	canonical	3	113	junction_5	13.4339950209244	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCAGGCGTGGCAGTGG	33618033	True	NA	NA	False	AATACA	-5	NA	33621321	33660779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_33621692_33640483_33640555_33655765_33655888_33657931_33658019_33658669_33658829_33659020_33659120_33659465
transcript_169740.nic	chr6	+	2414	7	ISM	ENSG00000096433.11	ENST00000605930.3	9079	58	0	35591	0	-35591	5prime_fragment	FALSE	canonical	3	113	junction_5	13.4339950209244	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCATCACTTGGGCCTC	33618033	True	NA	-8	True	AATAAA	-6	NA	33621321	33660971	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_33621692_33640483_33640555_33655765_33655888_33657931_33658019_33658669_33658829_33659020_33659120_33659465
transcript_169747.nnic	chr6	-	648	5	NNC	ENSG00000137288.10	novel	1284	4	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	118	junction_3	809.047395088817	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTACGGTTTGGGAATCTC	-33699984	True	NA	-10	True	AATAAA	-22	NA	33711711	33697567	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_33697751_33700443_33700514_33701345_33701421_33710694_33710852_33711548
transcript_169750.known	chr6	-	1284	4	FSM	ENSG00000137288.10	ENST00000607484.6	1284	4	0	0	0	0	multi-exon	FALSE	canonical	3	1651	junction_3	89.8047264284508	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTTATGCCGAAATGCAG	-33699973	True	NA	-4	True	AATAAA	-23	NA	33711700	33696763	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33697751_33700443_33700514_33701345_33701421_33711548
transcript_169758.known	chr6	-	4365	1	FSM	ENSG00000137288.10	ENST00000606961.1	4365	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTCTTTATGATTCATT	-33698641	False	NA	-13	True	GATAAA	-4	NA	33698657	33694292	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33694300_33698700
transcript_169760.known	chr6	-	2618	6	FSM	ENSG00000161896.12	ENST00000293756.5	2618	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.8	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGGTGTGCCTTATTAC	-33746869	True	NA	NA	False	AATAAA	-33	NA	33746905	33721661	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33723188_33725440_33725617_33726730_33726907_33728086_33728301_33735277_33735656_33746757
transcript_169766.known	chr6	-	2941	9	FSM	ENSG00000161904.12	ENST00000293760.10	2941	9	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_6	48.9781520169963	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTGCCCATGGTTCT	-33785291	True	NA	NA	False	AATAAA	-19	NA	33789130	33771212	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33772779_33776953_33777057_33777137_33777240_33778241_33778388_33780099_33780180_33781076_33781154_33784351_33784428_33786733_33786775_33788380
transcript_169767.known	chr6	-	2323	9	FSM	ENSG00000161904.12	ENST00000421671.6	2323	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	158.612538911651	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTTTCCTTAATAAAGC	-33785286	True	NA	-51	True	NA	NA	NA	33789125	33771431	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_33772779_33776953_33777057_33777137_33777240_33778241_33778388_33780099_33780180_33781076_33781154_33784351_33784428_33786733_33786775_33788774
transcript_169796.nnic	chr6	-	4857	11	NNC	ENSG00000124493.14	novel	7368	11	NA	NA	212	0	intron_retention	FALSE	canonical	3	100	junction_10	22.601991062736	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCCGGGCTCCACATCCA	-34145856	False	NA	-15	True	AATAAA	-18	NA	34145875	34021853	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_34022871_34028119_34028367_34035667_34036604_34040177_34040315_34040547_34040749_34056543_34056685_34058973_34059129_34061892_34062029_34091882_34092100_34132977_34133860_34145087
transcript_169797.known	chr6	-	7368	11	FSM	ENSG00000124493.14	ENST00000538487.7	7368	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	48.7138583977907	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCTTTTTTTTCTATAA	-34146068	False	NA	NA	False	ATTAAA	-15	NA	34146087	34018642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_34022871_34028119_34028367_34035667_34036604_34040177_34040315_34040547_34040749_34056543_34056685_34058973_34059129_34061892_34062029_34091882_34092100_34132977_34133860_34145999
transcript_169800.nnic	chr6	-	4444	11	NNC	ENSG00000124493.14	novel	7368	11	NA	NA	301	0	intron_retention	FALSE	canonical	3	100	junction_10	22.601991062736	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGGAAAAAAAATCAA	-34143802	True	NA	NA	False	NA	NA	NA	34145786	34022177	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_34022871_34028119_34028367_34035667_34036604_34040177_34040315_34040547_34040749_34056543_34056685_34058973_34059129_34061892_34062029_34091882_34092100_34132977_34133860_34145087
transcript_169805.nnic	chr6	-	2610	2	NNC	ENSG00000124493.14	novel	7275	10	NA	NA	212	-40454	intron_retention	FALSE	canonical	3	100	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTATGTGCCCGTTTCTC	-34145856	False	NA	NA	False	AAAACA	-19	NA	34145875	34132037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_34133860_34145087
transcript_16982.known	chr1	+	1931	12	FSM	ENSG00000117523.18	ENST00000476522.5	1931	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	15.5871317979271	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAGAACGGCAGAAAGAAAA	171470369	True	NA	-25	True	AAAAAG	-9	NA	171485550	171532792	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_171485736_171512031_171512201_171512994_171513173_171514535_171514631_171515733_171515860_171517590_171517815_171522176_171522260_171523220_171523355_171523434_171523523_171524820_171524966_171527790_171527845_171532342
transcript_169832.known	chr6	+	1887	6	FSM	ENSG00000137309.20	ENST00000401473.7	1887	6	0	0	0	0	multi-exon	FALSE	canonical	3	6101	junction_3	5391.33458060247	2809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGTCTCCTGTGGTGTG	33829092	True	NA	49	True	AATAAA	-20	NA	34236872	34246231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_34236964_34237203_34237318_34240736_34240883_34242711_34242796_34243467_34243519_34244830
transcript_169840.known	chr6	+	1920	6	FSM	ENSG00000137309.20	ENST00000311487.9	1920	6	0	0	0	0	multi-exon	FALSE	canonical	3	16478	junction_3	1396.17769642693	9639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGTCTCCTGTGGTGTG	33829092	True	NA	49	True	AATAAA	-20	NA	34236872	34246231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_34236964_34237203_34237318_34240736_34240916_34242711_34242796_34243467_34243519_34244830
transcript_16985.nic	chr1	+	1403	10	ISM	ENSG00000117523.18	ENST00000647382.2	10624	35	-35	68641	-35	0	5prime_fragment	FALSE	canonical	3	24	junction_5	9.17726659862414	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATGAAGTTTCCAACACT	171470313	True	NA	NA	False	AAAAAG	-4	NA	171485494	171524870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_171485736_171512031_171512201_171512994_171513173_171514535_171514646_171515733_171515860_171517590_171517815_171522176_171522260_171523220_171523355_171523434_171523523_171524820
transcript_169868.known	chr6	+	1773	5	FSM	ENSG00000137309.20	ENST00000347617.10	1773	5	0	0	0	0	multi-exon	FALSE	canonical	3	1569	junction_1	7979.74966320999	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGTCTCCTGTGGTGTG	33829092	True	NA	49	True	AATAAA	-20	NA	34236872	34246231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_34236964_34240736_34240883_34242711_34242796_34243467_34243519_34244830
transcript_169870.nic	chr6	+	1822	5	NIC	ENSG00000137309.20	novel	2159	5	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	1569	junction_1	7429.60592831141	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGAGTCTCCTGTGGTGT	34235996	False	NA	48	True	AATAAA	-19	NA	34236855	34246230	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_34236964_34240736_34240916_34242711_34242796_34243467_34243519_34244830
transcript_169889.known	chr6	+	2159	5	FSM	ENSG00000137309.20	ENST00000447654.5	2159	5	0	0	0	0	multi-exon	FALSE	canonical	3	16478	junction_2	1560.29762785822	1195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGAGTCTCCTGTGGTGT	33829092	True	NA	48	True	AATAAA	-19	NA	34236872	34246230	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_34237318_34240736_34240916_34242711_34242796_34243467_34243519_34244830
transcript_16989.known	chr1	+	717	5	FSM	ENSG00000117523.18	ENST00000467601.1	717	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	13.3299474867683	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGTACTTTCTCTTTA	171470414	True	NA	NA	False	NA	NA	NA	171485595	171515859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_171485736_171512031_171512201_171513000_171513173_171514535_171514646_171515733
transcript_169893.known	chr6	-	9900	5	FSM	ENSG00000272325.2	ENST00000607016.2	9900	5	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_2	22.0156194552867	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTTTAGTGTCTGGTCT	-34392653	False	NA	-3	True	AATAAA	-20	NA	34392669	34279678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_34288932_34293450_34293536_34295640_34295686_34341861_34341973_34392263
transcript_169903.known	chr6	-	1053	5	FSM	ENSG00000186577.14	ENST00000481533.5	1053	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	49.3203811826308	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTTTTGATTTCATCAAG	-34247773	True	NA	-26	True	AATAAA	-15	NA	34248989	34246394	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_34246869_34247043_34247150_34247466_34247493_34247680_34247865_34248726
transcript_169904.known	chr6	-	818	5	FSM	ENSG00000186577.14	ENST00000476320.6	818	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_4	27.2889629704025	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTTTTGATTTCATCAAG	-34247790	True	NA	-26	True	AATAAA	-15	NA	34249006	34246394	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_34246869_34247043_34247150_34247466_34247493_34247680_34247865_34248978
transcript_169905.known	chr6	-	903	5	FSM	ENSG00000186577.14	ENST00000468145.1	903	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	62.3718686588754	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGCAGGCTTTGGAGTT	-34247773	True	NA	-116	True	NA	NA	NA	34248989	34246484	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_34246869_34247043_34247150_34247466_34247493_34247740_34247865_34248726
transcript_169906.known	chr6	-	792	5	FSM	ENSG00000186577.14	ENST00000394990.8	792	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	53.6300988251933	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTTTTGATTTCATCAAG	-34247824	True	NA	-26	True	AATAAA	-15	NA	34249040	34246394	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_34246869_34247043_34247150_34247466_34247493_34247740_34247865_34248978
transcript_169907.known	chr6	-	806	4	FSM	ENSG00000186577.14	ENST00000413013.6	806	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	64.5652125115891	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTTTTGATTTCATCAAG	-34247804	True	NA	-26	True	AATAAA	-15	NA	34249020	34246394	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_34246869_34247043_34247150_34247680_34247865_34248978
transcript_169909.known	chr6	-	363	1	FSM	ENSG00000220583.1	ENST00000402419.1	363	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGAGGAGCGCATTGTCC	NA	False	NA	NA	False	NA	NA	NA	34263673	34263310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_34263300_34263700
transcript_16991.nic	chr1	+	577	3	ISM	ENSG00000117523.18	ENST00000476522.5	1931	12	-45	19620	-24	-2624	5prime_fragment	FALSE	canonical	3	37	junction_2	0.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTCAAAGTCTGTTAAA	171470324	True	NA	NA	False	AAGAAA	-2	NA	171485505	171513172	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_171485736_171512031_171512201_171512994
transcript_169911.known	chr6	-	671	7	FSM	ENSG00000124614.16	ENST00000344700.8	671	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	4681.31711344859	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTCCATTTTGTTTG	-34211692	True	NA	-5	True	AATAAA	-22	NA	34426052	34417453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_34417548_34417797_34417898_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34426031
transcript_169915.known	chr6	-	777	6	FSM	ENSG00000124614.16	ENST00000467531.5	777	6	0	0	0	0	multi-exon	FALSE	canonical	1	70	junction_5	4040.98218753807	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTCCATTTTGTTTG	-34425763	False	NA	-5	True	AATAAA	-22	NA	34425784	34417453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_34417548_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34425557
transcript_169917.known	chr6	-	781	6	FSM	ENSG00000124614.16	ENST00000621356.3	781	6	0	0	0	0	multi-exon	FALSE	canonical	3	1712	junction_5	3414.76332415586	1363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTCCATTTTGTTTG	-34211666	True	NA	-5	True	AATAAA	-22	NA	34426026	34417453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_34417548_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34425795
transcript_169919.known	chr6	-	588	6	FSM	ENSG00000124614.16	ENST00000648437.1	588	6	0	0	0	0	multi-exon	FALSE	canonical	3	7167	junction_5	1530.98169812705	3721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTCCATTTTGTTTG	-34211709	True	NA	-5	True	AATAAA	-22	NA	34426069	34417453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_34417548_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34426031
transcript_16992.nic	chr1	+	393	2	ISM	ENSG00000117523.18	ENST00000467601.1	717	5	-90	3665	-24	-3602	5prime_fragment	FALSE	canonical	3	38	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACAGGTGAGTAAAATCAA	171470324	True	NA	88	True	NA	NA	NA	171485505	171512194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_171485736_171512031
transcript_169923.known	chr6	-	1407	5	FSM	ENSG00000124614.16	ENST00000644700.1	1407	5	0	0	0	0	multi-exon	FALSE	canonical	3	7167	junction_4	1578.5908866771	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTCCATTTTGTTTG	-34211707	True	NA	-5	True	AATAAA	-22	NA	34426067	34417453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34426031
transcript_169924.known	chr6	+	4229	10	FSM	ENSG00000124507.11	ENST00000374043.6	4229	10	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_7	8.37987005998436	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGCATTGTCATCTTGAGT	34465448	True	NA	9	True	GATAAA	-24	NA	34466138	34535229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_34466271_34526242_34526369_34527331_34527489_34528641_34528878_34529396_34529553_34529665_34529842_34530242_34530364_34530459_34530588_34531599_34531788_34532420
transcript_16993.known	chr1	-	1738	9	FSM	ENSG00000117533.15	ENST00000474047.5	1738	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	41.1747419542612	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTAAATGCTTTTGTC	-171740486	True	NA	NA	False	AATGAA	-2	NA	171742060	171701091	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_171702085_171704386_171704535_171706366_171706419_171709664_171709745_171710713_171710815_171719170_171719222_171728523_171728571_171738348_171738464_171741909
transcript_169932.known	chr6	-	4338	5	FSM	ENSG00000196821.10	ENST00000374023.8	4338	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	12.747548783982	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTTCATGTGTGTTGG	-34695673	True	NA	-15	True	ATTAAA	-22	NA	34696767	34587287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_34590601_34606554_34606905_34646600_34646799_34654624_34654780_34696445
transcript_169933.known	chr6	+	365	2	FSM	ENSG00000272288.7	ENST00000606496.2	371	2	5	1	5	0	multi-exon	FALSE	canonical	3	32	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGCCTTGTTCTGTGTTT	34696286	True	NA	9	True	AATAAA	-15	NA	34696944	34697470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_34696998_34697158
transcript_169935.known	chr6	+	806	6	FSM	ENSG00000124562.10	ENST00000244520.10	806	6	0	0	0	0	multi-exon	FALSE	canonical	3	2122	junction_1	409.602050776116	899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTTTCTCTAGCTCAT	34738575	True	NA	7	True	TATAAA	-18	NA	34757504	34773857	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_34757552_34757911_34757955_34762594_34762704_34767907_34767998_34770290_34770396_34773445
transcript_169937.known	chr6	+	600	5	FSM	ENSG00000124562.10	ENST00000374018.5	600	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	1281.16107008448	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGTGGGACAAAAAAGA	34738595	True	NA	-56	True	NA	NA	NA	34757524	34773714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_34757552_34762594_34762704_34767907_34767998_34770290_34770396_34773445
transcript_169938.known	chr6	+	1054	5	FSM	ENSG00000124562.10	ENST00000374017.3	1054	5	0	0	0	0	multi-exon	FALSE	canonical	3	2947	junction_3	168.690545081815	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTTCCCTTTTTCCTCC	34738624	True	NA	24	True	AATAAA	-24	NA	34757553	34773794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_34757955_34762594_34762704_34767907_34767998_34770290_34770396_34773445
transcript_169940.known	chr6	+	9567	21	FSM	ENSG00000065060.18	ENST00000192788.6	9567	21	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_8	9.00610903775876	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTTGTATATCCGTTG	34790537	True	NA	7	True	ATTAAA	-16	NA	34792082	34877514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_34792295_34821652_34821816_34821916_34821956_34823256_34823349_34834216_34834407_34834720_34834862_34835293_34835465_34836155_34836349_34855616_34855704_34856238_34856410_34856789_34856930_34857328_34857471_34857723_34857918_34858123_34859572_34864001_34864199_34867224_34867380_34867465_34867617_34870853_34871117_34871583_34871693_34871818_34871926_34872312
transcript_169948.known	chr6	-	1849	5	FSM	ENSG00000064995.19	ENST00000361288.9	1849	5	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_2	17.1828402774396	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCAAAGTTTGACTAGATA	-34879584	True	NA	NA	False	AATACA	-39	NA	34888042	34877461	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_34878721_34879966_34880064_34880288_34880377_34882931_34883081_34887786
transcript_16995.known	chr1	-	4977	8	FSM	ENSG00000117533.15	ENST00000236192.12	4977	8	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_3	15.5917298853054	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGCACTTTGGCTTATTC	-171740491	True	NA	NA	False	AATAAA	-22	NA	171742065	171700159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_171704535_171706366_171706419_171709664_171709745_171710713_171710815_171719170_171719222_171728523_171728571_171738348_171738464_171741909
transcript_169950.known	chr6	-	1465	4	FSM	ENSG00000064995.19	ENST00000420584.3	1465	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	151.085700477871	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGGTGTATTCATTTTCT	-34879613	True	NA	-3	True	ATTAAA	-17	NA	34888071	34877777	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_34878721_34880288_34880377_34882931_34883081_34887786
transcript_169954.known	chr6	+	6350	24	FSM	ENSG00000064999.15	ENST00000360359.5	6350	24	0	0	0	0	multi-exon	TRUE	canonical	3	138	junction_12	15.5384759357067	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTAATTCTTCTGAGTCT	34885894	True	NA	21	True	AATAAA	-21	NA	34889254	35091406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_34889600_34967238_34967320_34970009_34970167_34981689_34981987_34982751_34982828_34983112_34983215_34983323_34983426_34985081_34985279_34989223_34989317_34994301_34994423_35017472_35018060_35054098_35054166_35060146_35060254_35078557_35078657_35079515_35079669_35079820_35079929_35080993_35081159_35082690_35082817_35083154_35083227_35083416_35083504_35084120_35084259_35085765_35085937_35086951_35087050_35088605
transcript_169965.known	chr6	+	7819	22	FSM	ENSG00000146197.9	ENST00000274938.8	7819	22	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	3.50962395670253	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGCATCTTTTCCTCTA	35213944	False	NA	NA	False	ATTAAA	-21	NA	35213955	35253079	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_35214504_35227579_35227703_35228613_35228740_35231724_35231860_35232849_35232976_35233184_35233302_35237901_35238019_35239751_35239875_35240373_35240491_35241140_35241267_35241542_35241660_35241805_35241911_35242203_35242321_35242621_35242781_35243020_35243237_35243593_35243756_35243962_35244131_35244649_35244812_35245227_35245426_35245943_35246097_35246205_35246286_35248555
transcript_16997.known	chr1	-	1193	8	FSM	ENSG00000117533.15	ENST00000367740.2	1193	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	47.0848127514248	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTCCAGTAAATATATTTT	-171740500	True	NA	NA	False	ACTAAA	-3	NA	171742074	171703949	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_171704535_171706366_171706419_171709664_171709745_171710713_171710815_171719170_171719219_171728523_171728571_171738348_171738464_171741909
transcript_169978.nnic	chr6	+	2808	15	NNC	ENSG00000065029.15	novel	2653	14	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_14	35.5275834201184	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGGTCCCTCCATCCT	35259052	True	NA	8	True	AATAAA	-14	NA	35259713	35295983	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_35259842_35281055_35281225_35286127_35286209_35286321_35286400_35287645_35287846_35290265_35290383_35290640_35290717_35291277_35291404_35291557_35291738_35292553_35292788_35292880_35293045_35293750_35293916_35294455_35294570_35294779_35294916_35295143
transcript_169992.known	chr6	+	2653	14	FSM	ENSG00000065029.15	ENST00000373953.8	2653	14	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_12	17.1277828905426	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGTCCCTCCATCCTTT	35259073	True	NA	10	True	AATAAA	-16	NA	35259734	35295985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_35259842_35281055_35281225_35286127_35286209_35286321_35286400_35287645_35287846_35290265_35290383_35290640_35290717_35291277_35291404_35291557_35291738_35292553_35292788_35292880_35293045_35293750_35293916_35294455_35294570_35295143
transcript_17.known	ERCC-00046	+	506	1	FSM	ERCC-00046A	DQ516748	506	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1557	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00046_+_0_500
transcript_170001.nic	chr6	+	2804	14	NIC	ENSG00000065029.15	novel	1373	10	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	32.8408390583915	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGGTCCCTCCATCCT	NA	False	NA	8	True	AATAAA	-14	NA	35259467	35295983	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_35259728_35281055_35281225_35286127_35286209_35286321_35286400_35287645_35287846_35290265_35290383_35290640_35290717_35291277_35291404_35291557_35291738_35292553_35292788_35292880_35293045_35293750_35293916_35294455_35294570_35295143
transcript_170008.known	chr6	+	2447	13	FSM	ENSG00000065029.15	ENST00000339411.5	2447	13	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_11	22.5345413877353	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGGTCCCTCCATCCT	35259746	False	NA	8	True	AATAAA	-14	NA	35259773	35295983	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_35259842_35281055_35281225_35286127_35286209_35286321_35286400_35287645_35287846_35290265_35290383_35290640_35290717_35291277_35291404_35291557_35291738_35292553_35292788_35292880_35293045_35294455_35294570_35295143
transcript_170015.nic	chr6	+	2639	13	NIC	ENSG00000065029.15	novel	1373	10	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	36.7839034844802	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGGTCCCTCCATCCT	NA	False	NA	8	True	AATAAA	-14	NA	35259467	35295983	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_35259728_35281055_35281225_35286127_35286209_35286321_35286400_35287645_35287846_35290265_35290383_35290640_35290717_35291277_35291404_35291557_35291738_35292553_35292788_35292880_35293045_35294455_35294570_35295143
transcript_170029.nic	chr6	+	2570	5	ISM	ENSG00000065029.15	ENST00000373953.8	2653	14	-809	7014	17	656	5prime_fragment	FALSE	canonical	3	98	junction_1	8.78564169540279	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCACAAAACTTTACAGTAG	NA	False	NA	NA	False	NA	NA	NA	35258925	35288971	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_35259842_35281055_35281225_35286127_35286209_35286321_35286400_35287645
transcript_170030.known	chr6	+	1476	5	FSM	ENSG00000065029.15	ENST00000491400.5	1476	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	50.756157261952	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATGTGCAACAGAACAG	NA	False	NA	NA	False	NA	NA	NA	35258908	35288315	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_35259387_35281055_35281225_35286127_35286209_35286321_35286400_35287645
transcript_170037.known	chr6	+	697	4	FSM	ENSG00000065029.15	ENST00000460229.1	697	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	55.934485486743	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAGCAGAGGATGATGAG	35259156	False	NA	NA	False	NA	NA	NA	35259603	35287777	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_35259728_35281055_35281225_35286127_35286400_35287645
transcript_170039.known	chr6	+	1024	3	FSM	ENSG00000065029.15	ENST00000484932.5	1024	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	57.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTTTCTTGAGTGACTG	35259080	True	NA	NA	False	AATGAA	-42	NA	35259527	35286782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_35259728_35281055_35281225_35286127
transcript_17004.nic	chr1	+	2437	9	NIC	ENSG00000010165.20	novel	3368	8	NA	NA	-20	54	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	105.339258469955	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCACTTGGGTTGGTTTGT	171776301	True	NA	27	True	AATAAA	-29	NA	171781639	171796957	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_171781796_171781987_171782121_171783739_171784500_171785878_171786079_171787734_171787931_171790451_171790617_171792016_171792236_171794395_171794528_171796481
transcript_170041.known	chr6	+	2296	11	FSM	ENSG00000023892.11	ENST00000316637.7	2296	11	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	12.5841169733915	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTGGCTCAGGTCTGTCC	35297270	True	NA	NA	False	AATAAA	-19	NA	35297817	35321771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_35297953_35309669_35309811_35310458_35310645_35312301_35312539_35312625_35312773_35317890_35318000_35318172_35318472_35319523_35319691_35319818_35320018_35320883_35320975_35321186
transcript_170042.nnic	chr6	+	2290	11	NNC	ENSG00000023892.11	novel	2296	11	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	24.7151775231334	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTGGCTCAGGTCTGTCC	NA	False	NA	NA	False	AATAAA	-19	NA	35297778	35321771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_35297953_35309669_35309811_35310458_35310645_35312301_35312539_35312625_35312773_35317935_35318000_35318172_35318472_35319523_35319691_35319818_35320018_35320883_35320975_35321186
transcript_170054.known	chr6	+	3774	9	FSM	ENSG00000112033.14	ENST00000311565.4	3774	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	43.9586097937594	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGACTGGAAGCTGACT	35340542	True	NA	17	True	AATAAA	-19	NA	35342613	35428178	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_35342682_35347066_35347151_35397497_35397594_35410986_35411218_35420126_35420282_35421819_35421959_35423945_35424149_35424328_35424780_35425831
transcript_170057.known	chr6	+	3734	8	FSM	ENSG00000112033.14	ENST00000360694.8	3734	8	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_5	10.7684345971673	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGACTGGAAGCTGACT	35340486	True	NA	17	True	AATAAA	-19	NA	35342557	35428178	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_35342682_35347066_35347151_35410986_35411218_35420126_35420282_35421819_35421959_35423945_35424149_35424328_35424780_35425831
transcript_170062.nic	chr6	+	2024	7	ISM	ENSG00000112033.14	ENST00000360694.8	3734	8	-23	2785	-23	0	5prime_fragment	FALSE	canonical	3	84	junction_5	11.2805141726785	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTAACAGTGGTCTAGAG	35340463	True	NA	NA	False	AATAAA	-18	NA	35342534	35425393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_35342682_35347066_35347151_35410986_35411218_35420126_35420282_35421819_35421959_35423945_35424149_35424328
transcript_170065.nnic	chr6	+	3639	7	NIC	ENSG00000112033.14	novel	3734	8	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	37.1423687391577	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGACTGGAAGCTGACT	35340497	True	NA	17	True	AATAAA	-19	NA	35342568	35428178	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_35342682_35410986_35411218_35420126_35420282_35421819_35421959_35423945_35424149_35424328_35424780_35425831
transcript_17007.known	chr1	+	2865	8	FSM	ENSG00000010165.20	ENST00000367737.9	2865	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	121.278731079464	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGAATTTTGTCTTTC	171776357	True	NA	8	True	ATTAAA	-17	NA	171781695	171797717	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_171782121_171783739_171784040_171785886_171786079_171787734_171787931_171790451_171790617_171792016_171792236_171794395_171794528_171796481
transcript_170078.known	chr6	+	2576	10	FSM	ENSG00000112039.5	ENST00000229769.3	2576	10	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_4	13.3036707085296	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTTTTCTTTTTTTTTT	35451454	True	NA	NA	False	AATAAA	-15	NA	35452337	35467102	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_35452794_35455746_35456354_35457555_35457601_35457915_35457985_35458296_35458441_35459330_35459455_35459681_35459761_35460551_35460619_35462788_35462915_35466243
transcript_17008.known	chr1	+	3368	8	FSM	ENSG00000010165.20	ENST00000361735.4	3368	8	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_4	12.8714206437267	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTGAATTTTGTCTTT	171776321	True	NA	7	True	ATTAAA	-16	NA	171781659	171797716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_171782121_171783739_171784500_171785878_171786079_171787734_171787931_171790451_171790617_171792016_171792236_171794395_171794528_171796481
transcript_170080.nnic	chr6	+	2561	10	NNC	ENSG00000112039.5	novel	2576	10	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_4	26.3387242489405	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTTTTCTTTTTTTTTT	35451448	True	NA	NA	False	AATAAA	-15	NA	35452331	35467102	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_35452794_35455746_35456354_35457555_35457601_35457915_35457985_35458317_35458441_35459330_35459455_35459681_35459761_35460551_35460619_35462788_35462915_35466243
transcript_170084.nnic	chr6	+	2458	9	NIC	ENSG00000112039.5	novel	2576	10	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_8	30.5897756611584	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTTTTCTTTTTTTTTT	35451446	True	NA	NA	False	AATAAA	-15	NA	35452329	35467102	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_35452794_35455746_35456354_35457555_35457601_35457915_35457985_35458296_35458441_35459330_35459455_35459681_35459761_35460551_35460619_35466243
transcript_170086.nnic	chr6	+	2571	9	NIC	ENSG00000112039.5	novel	2576	10	NA	NA	-64	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_3	29.0922562720735	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTTTTCTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	35452273	35467102	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_35452794_35455746_35456354_35457555_35457601_35458296_35458441_35459330_35459455_35459681_35459761_35460551_35460619_35462788_35462915_35466243
transcript_170087.nnic	chr6	+	2550	9	NNC	ENSG00000112039.5	novel	2576	10	NA	NA	-64	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	31.00781151581	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTTTTCTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	35452273	35467102	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_35452794_35455746_35456354_35457555_35457601_35458317_35458441_35459330_35459455_35459681_35459761_35460551_35460619_35462788_35462915_35466243
transcript_170107.known	chr6	+	718	6	FSM	ENSG00000198755.11	ENST00000322203.7	718	6	0	0	0	0	multi-exon	FALSE	canonical	3	9710	junction_1	1858.10047091109	3610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTGTCTGCCTGTGATT	35276971	True	NA	23	True	AATAAA	-15	NA	35468400	35470780	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_35468440_35468798_35468874_35468946_35469028_35469380_35469530_35470178_35470352_35470579
transcript_170108.known	chr6	+	962	6	FSM	ENSG00000198755.11	ENST00000478340.2	962	6	0	0	0	0	multi-exon	FALSE	canonical	3	912	junction_3	5185.38750721679	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCCTGTGATTGAGGG	35276990	True	NA	28	True	AATAAA	-20	NA	35468419	35470785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_35468440_35468798_35468874_35468946_35469286_35469380_35469530_35470178_35470352_35470579
transcript_170113.known	chr6	+	1069	5	FSM	ENSG00000198755.11	ENST00000467020.5	1069	5	0	0	0	0	multi-exon	FALSE	canonical	3	9710	junction_1	1963.28888602773	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCCTGTGATTGAGGG	35276978	True	NA	28	True	AATAAA	-20	NA	35468407	35470785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_35468440_35468798_35468874_35468946_35469530_35470178_35470352_35470579
transcript_170115.known	chr6	+	632	5	FSM	ENSG00000198755.11	ENST00000490335.4	632	5	0	0	0	0	multi-exon	FALSE	canonical	3	9710	junction_1	2028.48975533523	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCACCTGGCTGTCAAC	35276990	True	NA	NA	False	NA	NA	NA	35468419	35470640	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_35468440_35468798_35469028_35469380_35469530_35470178_35470352_35470579
transcript_170125.known	chr6	+	1063	5	FSM	ENSG00000198755.11	ENST00000464112.5	1063	5	0	0	0	0	multi-exon	FALSE	canonical	3	14193	junction_4	173.618835383722	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCCTGTGATTGAGGG	35276990	True	NA	28	True	AATAAA	-20	NA	35468419	35470785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_35468874_35468946_35469028_35469380_35469530_35470178_35470352_35470579
transcript_17013.known	chr1	+	3022	8	FSM	ENSG00000010165.20	ENST00000362019.7	3022	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	115.712345662749	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGAATTTTGTCTTTC	171776343	True	NA	8	True	ATTAAA	-17	NA	171781681	171797717	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_171781796_171783739_171784500_171785878_171786079_171787734_171787931_171790451_171790617_171792016_171792236_171794395_171794528_171796481
transcript_170130.known	chr6	-	1676	13	FSM	ENSG00000007866.22	ENST00000639578.3	1676	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_10	48.1498673126128	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCCCTGCCACTGTTCTG	-35495665	True	NA	NA	False	NA	NA	NA	35497064	35474891	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_35475158_35475335_35475489_35475565_35475707_35475918_35476093_35476301_35476436_35477310_35477373_35478274_35478325_35478433_35478572_35479304_35479317_35480059_35480123_35484559_35484625_35486460_35486712_35496897
transcript_170131.known	chr6	-	2986	13	FSM	ENSG00000007866.22	ENST00000338863.13	2986	13	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_12	23.6619713652284	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTGTGTGCCAGACCTT	-35495680	True	NA	-2	True	ATTAAA	-29	NA	35497079	35473596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_35475158_35475335_35475489_35475565_35475707_35475918_35476093_35476301_35476436_35477310_35477373_35478274_35478325_35478433_35478572_35479304_35479317_35480311_35480375_35484559_35484625_35486460_35486712_35496897
transcript_170136.nic	chr6	-	2891	12	ISM	ENSG00000007866.22	ENST00000338863.13	2986	13	10281	0	10152	0	3prime_fragment	FALSE	canonical	3	98	junction_9	15.4181389364755	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTGTGTGCCAGACCTT	-35486785	False	NA	-2	True	ATTAAA	-29	NA	35486798	35473596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_35475158_35475335_35475489_35475565_35475707_35475918_35476093_35476301_35476436_35477310_35477373_35478274_35478325_35478433_35478572_35479304_35479317_35480311_35480375_35484559_35484625_35486460
transcript_170137.nnic	chr6	-	2936	12	NIC	ENSG00000007866.22	novel	2986	13	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_9	39.9751989229024	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTGTGTGCCAGACCTT	-35495693	True	NA	-2	True	ATTAAA	-29	NA	35497092	35473596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_35475158_35475335_35475489_35475565_35475707_35475918_35476093_35476301_35476436_35477310_35477373_35478274_35478325_35478433_35478572_35479304_35479317_35484559_35484625_35486460_35486712_35496897
transcript_170140.nnic	chr6	-	2825	11	NIC	ENSG00000007866.22	novel	2986	13	NA	NA	10155	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_9	38.2555878271397	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTGTGTGCCAGACCTT	-35485917	True	NA	-2	True	ATTAAA	-29	NA	35486795	35473596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_35475158_35475335_35475489_35475565_35475707_35475918_35476093_35476301_35476436_35477310_35477373_35478274_35478325_35478433_35478572_35479304_35479317_35484559_35484625_35486460
transcript_170144.known	chr6	-	2729	11	FSM	ENSG00000007866.22	ENST00000402886.9	2729	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	42.7668095606862	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTGTGTGCCAGACCTT	-35495551	True	NA	-2	True	ATTAAA	-29	NA	35496950	35473596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_35475158_35475335_35475489_35475565_35475707_35475918_35476093_35476301_35476436_35477310_35477373_35478274_35478325_35478433_35478572_35479304_35479317_35486460_35486712_35496897
transcript_170145.known	chr6	-	2084	14	FSM	ENSG00000112041.13	ENST00000614066.4	2084	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	6.79888609045672	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCGGAGCGGTGGTTCCT	-35512707	True	NA	-7	True	AATAAA	-15	NA	35512869	35497876	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_35498461_35499980_35500153_35503558_35503658_35503736_35503849_35505740_35505854_35506002_35506174_35509208_35509313_35509633_35509751_35509826_35509929_35510860_35511011_35511647_35511807_35512179_35512271_35512638_35512691_35512811
transcript_170157.known	chr6	-	3750	11	FSM	ENSG00000096060.15	ENST00000357266.9	3750	11	0	0	0	0	multi-exon	FALSE	canonical	2	230	junction_7	44.3594409342589	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCATTGTTTTTGGTTT	-35683637	True	NA	-10	True	AATAAA	-17	NA	35688915	35573589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_35575943_35576993_35577234_35580035_35580222_35587033_35587118_35591129_35591221_35597247_35597405_35619095_35619211_35620131_35620275_35637013_35637159_35642719_35642844_35688803
transcript_170173.known	chr6	+	426	3	FSM	ENSG00000196748.10	ENST00000403376.4	426	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	3	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCTCTGTCTGTACTT	35776320	True	NA	2	True	ATTAAA	-14	NA	35776597	35779552	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_35776703_35777458_35777582_35779354
transcript_170174.known	chr6	+	532	3	FSM	ENSG00000196748.10	ENST00000481904.5	532	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	11.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCTCTGTCTGTACTT	35776316	True	NA	2	True	ATTAAA	-14	NA	35776593	35779552	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_35776805_35777458_35777582_35779354
transcript_170175.known	chr6	+	313	2	FSM	ENSG00000196748.10	ENST00000467122.1	313	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCTCTGTCTGTACTT	35776412	False	NA	2	True	ATTAAA	-14	NA	35776689	35779552	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_35776805_35779354
transcript_170180.known	chr6	-	4348	16	FSM	ENSG00000096063.16	ENST00000373825.7	4348	16	0	0	0	0	multi-exon	FALSE	canonical	3	730	junction_4	65.2368675588343	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTGAGTATGCTTTTTT	-35908012	True	NA	-2	True	AGTAAA	-13	NA	35921098	35832965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_35835489_35838336_35838430_35842534_35842605_35857260_35857369_35869009_35869111_35869481_35869902_35870280_35870495_35870933_35870960_35872562_35872729_35874232_35874340_35886723_35886812_35888023_35888112_35888814_35888924_35890894_35891014_35920467_35920529_35921043
transcript_170181.known	chr6	-	4357	16	FSM	ENSG00000096063.16	ENST00000423325.6	4357	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_14	211.040912305332	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTTCCAAAAATCTCTG	-35908061	True	NA	-9	True	AATAAA	-20	NA	35921147	35833033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_35835489_35838336_35838430_35842534_35842605_35857260_35857369_35869009_35869111_35869481_35869902_35870280_35870495_35870933_35870960_35872562_35872729_35874232_35874340_35886723_35886812_35888023_35888112_35888814_35888924_35890894_35891042_35920467_35920529_35921043
transcript_170190.nic	chr6	-	939	10	ISM	ENSG00000096063.16	ENST00000373825.7	4348	16	-87	37496	-38	-795	5prime_fragment	FALSE	canonical	3	746	junction_3	67.2094570065189	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAGAAGAAGCAGAAGCG	-35908099	True	NA	-61	True	AAGAAA	-1	NA	35921185	35870461	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_35870495_35870933_35870960_35872562_35872729_35874232_35874340_35886723_35886812_35888023_35888112_35888814_35888924_35890894_35891014_35920467_35920529_35921043
transcript_170194.nic	chr6	-	906	9	ISM	ENSG00000096063.16	ENST00000373825.7	4348	16	-87	37968	-38	-1267	5prime_fragment	FALSE	canonical	3	746	junction_2	70.5088646909025	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTATAAGGTGTTTTTA	-35908099	True	NA	-1	True	NA	NA	NA	35921185	35870933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_35870960_35872562_35872729_35874232_35874340_35886723_35886812_35888023_35888112_35888814_35888924_35890894_35891014_35920467_35920529_35921043
transcript_170198.nic	chr6	-	880	8	ISM	ENSG00000096063.16	ENST00000373825.7	4348	16	-87	39597	-38	1677	5prime_fragment	FALSE	canonical	3	746	junction_1	72.5627103874677	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTATTTTCTTTTAGGGAC	-35908099	True	NA	NA	False	NA	NA	NA	35921185	35872562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_35872729_35874232_35874340_35886723_35886812_35888023_35888112_35888814_35888924_35890894_35891014_35920467_35920529_35921043
transcript_17020.nic	chr1	+	2459	7	NIC	ENSG00000010165.20	novel	3368	8	NA	NA	-15	54	intron_retention	FALSE	canonical	3	35	junction_4	118.196752164441	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCACTTGGGTTGGTTTGT	171776306	True	NA	27	True	AATAAA	-29	NA	171781644	171796957	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_171782121_171783739_171784500_171785878_171786079_171787734_171787931_171792016_171792236_171794395_171794528_171796481
transcript_170203.known	chr6	-	4762	15	FSM	ENSG00000096063.16	ENST00000346162.10	4762	15	0	0	0	0	multi-exon	FALSE	canonical	3	730	junction_4	67.5210095799365	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTTCCAAAAATCTCTG	-35907979	True	NA	-9	True	AATAAA	-20	NA	35921065	35833033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_35835489_35838336_35838430_35842534_35842605_35857260_35857369_35869009_35869111_35869481_35869902_35870280_35870495_35870933_35870960_35872562_35872729_35874232_35874340_35886723_35886812_35888023_35888112_35888814_35888924_35890894_35891014_35920467
transcript_170205.known	chr6	+	4222	12	FSM	ENSG00000112062.11	ENST00000229794.9	4222	12	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_9	26.4518899010797	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGCACTCATCTGTTTATG	36024645	True	NA	7	True	AATAAA	-17	NA	36027807	36111236	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_36028274_36052698_36052829_36059288_36059348_36072872_36072985_36073690_36073721_36074048_36074097_36075847_36075963_36076536_36076609_36095986_36096067_36102570_36102650_36107454_36107629_36108379
transcript_170212.known	chr6	+	4319	12	FSM	ENSG00000112062.11	ENST00000229795.7	4319	12	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_9	66.7261580288365	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGCACTCATCTGTTTATG	NA	False	NA	7	True	AATAAA	-17	NA	36027710	36111236	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_36028274_36052698_36052829_36059288_36059348_36072872_36072985_36073690_36073721_36074048_36074097_36075847_36075963_36076536_36076609_36100187_36100268_36102570_36102650_36107454_36107629_36108379
transcript_170218.known	chr6	+	1066	11	FSM	ENSG00000112062.11	ENST00000310795.8	1066	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_9	63.8859139403985	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCCAAATATTATTCAAGT	36028137	False	NA	-4	True	NA	NA	NA	36028157	36108509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_36028274_36052698_36052829_36059288_36059348_36072872_36072985_36073690_36073721_36074048_36074097_36075847_36075963_36076536_36076609_36095986_36096067_36107454_36107629_36108379
transcript_170219.known	chr6	+	6316	12	FSM	ENSG00000156711.17	ENST00000211287.9	6316	12	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	7.82768977877428	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGTGCACAGACCCCTG	36130021	True	NA	4	True	AATAAA	-18	NA	36130512	36144521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_36130702_36131270_36131401_36132620_36132680_36135752_36135862_36136018_36136049_36136483_36136532_36136655_36136771_36136878_36136951_36138364_36138445_36138701_36138781_36138878_36139056_36139293
transcript_170221.known	chr6	+	6052	13	FSM	ENSG00000096070.19	ENST00000357641.10	6052	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	28.4852544700275	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTGTGTTGTGTTTAAT	36195152	True	NA	6	True	AATAAA	-18	NA	36196743	36232790	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_36196971_36200296_36201771_36204657_36204815_36207312_36207445_36209786_36209916_36210215_36210529_36211257_36211561_36213879_36214387_36217916_36218011_36222167_36222266_36225266_36225365_36228901_36229057_36230425
transcript_170228.known	chr6	+	4816	11	FSM	ENSG00000096070.19	ENST00000449261.6	4816	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	37.7062329065103	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGCACATGATGCTCTAT	36195374	False	NA	NA	False	NA	NA	NA	36196965	36232590	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_36196971_36200296_36201771_36204657_36204815_36207312_36207445_36209786_36209916_36210215_36210529_36217916_36218011_36222167_36222266_36225270_36225365_36228901_36229057_36230425
transcript_170232.known	chr6	+	5384	8	FSM	ENSG00000112078.14	ENST00000373731.7	5384	8	0	0	0	0	multi-exon	TRUE	canonical	3	158	junction_3	25.7871982161059	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGTTTTTTTTTTAG	36439629	True	NA	4	True	AATAAA	-14	NA	36442999	36491141	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_36443112_36470051_36470258_36474788_36475063_36479120_36479224_36479590_36479712_36481561_36481760_36484713_36484825_36486882
transcript_170236.known	chr6	-	1605	8	FSM	ENSG00000010030.14	ENST00000340181.9	1605	8	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_5	2.43276948084663	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTTCTTTTATTTTT	-36387615	False	NA	-2	True	AATAAA	-16	NA	36387669	36366193	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_36366763_36366874_36366976_36368928_36369072_36371329_36371561_36373452_36373579_36375870_36376036_36385533_36385670_36387535
transcript_170239.known	chr6	+	1339	7	FSM	ENSG00000112078.14	ENST00000265344.8	1339	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	69.1586340717243	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATTTGGGTCTGGTGCT	36439665	True	NA	-86	True	NA	NA	NA	36443035	36487406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_36443112_36470051_36470258_36479120_36479224_36479590_36479712_36481561_36481760_36484713_36484825_36486882
transcript_170242.nic	chr6	+	1306	6	ISM	ENSG00000112078.14	ENST00000373731.7	5384	8	-27	9117	-27	-5382	5prime_fragment	FALSE	canonical	3	158	junction_3	27.2954208613826	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTTTAAATCCTTTTGA	36439602	True	NA	27	True	ATTAAA	-24	NA	36442972	36482024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_36443112_36470051_36470258_36474788_36475063_36479120_36479224_36479590_36479712_36481561
transcript_170245.known	chr6	+	1494	6	FSM	ENSG00000112078.14	ENST00000481911.5	1494	6	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_3	80.7846520076679	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGCCTCTGCACCCAAAT	36439650	True	NA	NA	False	AATGAA	-13	NA	36443020	36487667	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_36443112_36470051_36470258_36479120_36479224_36481561_36481760_36484713_36484825_36486882
transcript_170248.known	chr6	-	1434	6	FSM	ENSG00000010030.14	ENST00000538992.3	1434	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	2.03960780543711	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTTTCTTTTATTTT	-36387746	True	NA	-3	True	AATAAA	-15	NA	36387800	36366194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_36366763_36366874_36366976_36368928_36369072_36371329_36371561_36373452_36373579_36387535
transcript_170249.known	chr6	+	4094	5	FSM	ENSG00000112078.14	ENST00000449081.6	4094	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	78.5187079618609	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAAAAAATTAGCCCGGT	36439657	True	NA	NA	False	ACTAAA	-3	NA	36443027	36490377	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_36443112_36470051_36470258_36481561_36481760_36484713_36484825_36486882
transcript_170252.known	chr6	+	1618	4	FSM	ENSG00000112078.14	ENST00000474988.5	1618	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	79.5501239610739	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTCATAAGAGTGCCAG	36439646	True	NA	NA	False	NA	NA	NA	36443016	36488096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_36443112_36481561_36481760_36484713_36484825_36486882
transcript_170254.known	chr6	+	406	2	FSM	ENSG00000112078.14	ENST00000443316.2	406	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTTCAGGTTTAGAAGC	36439641	True	NA	NA	False	AATAAA	-19	NA	36443011	36443723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_36443112_36443417
transcript_170255.known	chr6	-	3585	14	FSM	ENSG00000112079.9	ENST00000229812.8	3585	14	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_13	27.7970242330545	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGGAAATACGTGGTGT	-36545254	True	NA	-10	True	AATAAA	-14	NA	36547479	36493891	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_36495915_36496710_36496806_36497779_36497876_36498362_36498487_36499872_36499991_36506582_36506645_36507499_36507603_36515337_36515493_36517716_36517841_36521733_36521818_36524340_36524464_36525590_36525643_36540071_36540208_36547189
transcript_170256.nnic	chr6	-	2313	14	NNC	ENSG00000112079.9	novel	3585	14	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	37.2054904645814	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTAGTGGAAATACGTGGT	-36545261	True	NA	-12	True	AATAAA	-12	NA	36547486	36493893	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_36494638_36496710_36496806_36497779_36497876_36498362_36498487_36499872_36499991_36506582_36506645_36507499_36507603_36515337_36515493_36517716_36517841_36521733_36521818_36524340_36524464_36525590_36525643_36540071_36540208_36547189
transcript_170261.known	chr6	+	1095	7	FSM	ENSG00000112081.17	ENST00000477442.6	1095	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	1807.05925162649	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTATGTACAGAAAATTCAA	36506784	True	NA	NA	False	NA	NA	NA	36594390	36602040	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_36594482_36596760_36596969_36598848_36598984_36599820_36600277_36601151_36601191_36601707_36601795_36601961
transcript_170269.known	chr6	+	4228	6	FSM	ENSG00000112081.17	ENST00000373715.11	4228	6	0	0	0	0	multi-exon	FALSE	canonical	3	3517	junction_3	225.015910548565	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTATCCTGCTTTCTCT	36506755	True	NA	NA	False	AATACA	-16	NA	36594361	36605600	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_36594482_36596760_36596969_36598848_36598984_36601151_36601191_36601707_36601795_36601961
transcript_170281.known	chr6	+	2104	4	FSM	ENSG00000124762.14	ENST00000448526.6	2104	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	107.97942190786	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTACTATTGTGGTTAT	36676243	True	NA	30	True	AATAAA	-24	NA	36676489	36687337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_36676525_36677901_36677934_36684096_36684547_36685750
transcript_170282.known	chr6	+	2102	3	FSM	ENSG00000124762.14	ENST00000615513.4	2102	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	112.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTACTATTGTGGTTAT	36676213	True	NA	30	True	AATAAA	-24	NA	36676459	36687337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_36676525_36684096_36684547_36685750
transcript_170283.known	chr6	+	2117	3	FSM	ENSG00000124762.14	ENST00000244741.10	2117	3	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_2	2	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTAATATTACTATTGTG	36674316	True	NA	25	True	AATAAA	-19	NA	36678713	36687332	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_36678799_36684096_36684547_36685750
transcript_170284.known	chr6	+	2267	3	FSM	ENSG00000124762.14	ENST00000405375.5	2267	3	0	0	0	0	multi-exon	TRUE	canonical	2	10	junction_1	111	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTACTATTGTGGTTAT	36674312	True	NA	30	True	AATAAA	-24	NA	36678709	36687337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_36678940_36684096_36684547_36685750
transcript_170288.known	chr6	+	6763	9	FSM	ENSG00000198663.17	ENST00000480824.7	6763	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	20.920982290514	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTCTTGTTGGTGTCA	36884594	True	NA	14	True	ATTAAA	-19	NA	36885951	36928964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_36886029_36894503_36894604_36899425_36899634_36902220_36902435_36914283_36914436_36914553_36914694_36916444_36916575_36919577_36919702_36923346
transcript_170293.known	chr6	+	1309	8	FSM	ENSG00000198663.17	ENST00000355190.7	1309	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	8.96705990084298	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTCTGGGGGTTGGTT	36884506	True	NA	5	True	AATAAA	-17	NA	36885863	36923522	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_36886029_36899425_36899634_36902220_36902435_36914283_36914436_36914553_36914694_36916444_36916575_36919577_36919702_36923346
transcript_170299.known	chr6	-	1516	4	FSM	ENSG00000137168.8	ENST00000373699.6	1516	4	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_1	13.4742552876052	200	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGCTGTGGTCTGATTC	-36874784	False	NA	-21	True	AATAAA	-20	NA	36874803	36854828	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_36856034_36856585_36856655_36871717_36871873_36874716
transcript_170311.known	chr6	-	1955	12	FSM	ENSG00000137409.20	ENST00000373627.10	1955	12	0	0	0	0	multi-exon	FALSE	canonical	3	1197	junction_4	539.922568675629	1628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTGGGGCGTCTCT	-36966301	True	NA	-7	True	AATAAA	-18	NA	36986196	36968140	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_36968975_36970038_36970115_36970405_36970474_36970646_36970695_36972651_36972797_36975657_36975718_36977198_36977251_36977633_36977692_36978077_36978156_36978504_36978612_36981587_36981673_36985852
transcript_170318.known	chr6	-	2006	12	FSM	ENSG00000137409.20	ENST00000373616.9	2006	12	0	0	0	0	multi-exon	FALSE	canonical	3	1723	junction_4	396.87837719003	1951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTGGGGCGTCTCT	NA	False	NA	-7	True	AATAAA	-18	NA	36986298	36968140	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_36968975_36970038_36970115_36970405_36970474_36970646_36970695_36972702_36972797_36975657_36975718_36977198_36977251_36977633_36977692_36978077_36978156_36978504_36978612_36981587_36981673_36985852
transcript_17034.known	chr1	+	4454	16	FSM	ENSG00000197959.15	ENST00000520906.5	4454	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	2.48908729367926	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTTGTATGCTTGGTTA	171841045	True	NA	NA	False	TATAAA	-27	NA	171841528	172311284	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_171841818_171921747_171921822_171987655_171987806_171988944_171989149_172032401_172032501_172033104_172033266_172038318_172038462_172042008_172042145_172044384_172044453_172048611_172048751_172068818_172068906_172081831_172081903_172092823_172092876_172131174_172131289_172253572_172253683_172308727
transcript_17035.known	chr1	+	2322	15	FSM	ENSG00000197959.15	ENST00000367733.6	2322	15	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_14	2.55250976931509	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGTGCCATGAATACTCC	171841014	True	NA	NA	False	AATAAA	-22	NA	171841497	172133392	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_171841818_171921747_171921822_171987655_171987806_171988944_171989149_172032401_172032501_172033104_172033266_172038318_172038462_172042008_172042145_172044384_172044453_172048611_172048751_172068818_172068906_172081831_172081903_172092823_172092876_172131174_172131289_172132888
transcript_170350.known	chr6	-	1572	11	FSM	ENSG00000137409.20	ENST00000460219.2	1572	11	0	0	0	0	multi-exon	FALSE	canonical	3	1723	junction_3	416.152568176624	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCCGAGGGCAGAACCT	-36966230	True	NA	NA	False	NA	NA	NA	36986125	36969465	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_36970115_36970405_36970474_36970646_36970695_36972702_36972797_36975657_36975718_36977198_36977251_36977633_36977692_36978077_36978156_36978504_36978612_36981587_36981673_36985852
transcript_17038.known	chr1	-	1456	2	FSM	ENSG00000135845.10	ENST00000344529.5	1456	2	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTTGTCTCATGATTTT	-172442501	True	NA	-4	True	ATTAAA	-16	NA	172444069	172441456	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_172442831_172443987
transcript_17039.known	chr1	-	2630	1	FSM	ENSG00000135845.10	ENST00000367728.1	2630	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTTGTCTCATGATTTT	-172442518	True	NA	-4	True	ATTAAA	-16	NA	172444086	172441456	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_172441500_172444100
transcript_170391.known	chr6	+	2703	6	FSM	ENSG00000137193.14	ENST00000373509.6	2703	6	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_1	20.370567002418	1108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGTGGCTTCTAATCGTCT	37164065	True	NA	15	True	AATAAA	-16	NA	37170151	37175428	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_37170658_37170772_37170880_37170980_37171032_37171124_37171492_37172995_37173173_37173933
transcript_170409.nnic	chr6	+	3518	14	NNC	ENSG00000065491.8	novel	3462	13	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	40.5945459361638	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTGGTTTTTCTCCTGT	37256482	True	NA	10	True	AATAAA	-20	NA	37257752	37332970	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_37257974_37269593_37269651_37279303_37279612_37282184_37282365_37282467_37282505_37282881_37282953_37284335_37284465_37287006_37287073_37291242_37291358_37312917_37313025_37313815_37313892_37316702_37316831_37317110_37317207_37331043
transcript_17041.known	chr1	+	5625	24	FSM	ENSG00000094975.14	ENST00000263688.4	5625	24	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_9	24.4196146640414	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGGCTCTTCTGTCTTT	172529923	True	NA	30	True	AATAAA	-23	NA	172533149	172611833	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_172533498_172551511_172551627_172553259_172553371_172555868_172556024_172557279_172557418_172557643_172557795_172569018_172569143_172570046_172570172_172570662_172570731_172573890_172573999_172575517_172575624_172577538_172577560_172577763_172577820_172578297_172578390_172579201_172579268_172585017_172585087_172585857_172585949_172588759_172589927_172590983_172591072_172600063_172600169_172602063_172602219_172602695_172602788_172608746_172608803_172609815
transcript_170419.known	chr6	+	3462	13	FSM	ENSG00000065491.8	ENST00000373491.3	3462	13	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_4	11.9172494030012	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTGGTTTTTCTCCTGT	37256501	True	NA	10	True	AATAAA	-20	NA	37257771	37332970	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_37257974_37269593_37269651_37279303_37279612_37282184_37282365_37282881_37282953_37284335_37284465_37287006_37287073_37291242_37291358_37312917_37313025_37313815_37313892_37316702_37316831_37317110_37317207_37331043
transcript_170427.nnic	chr6	+	3301	12	NIC	ENSG00000065491.8	novel	3462	13	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_3	33.0659246339918	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTGGTTTTTCTCCTGT	37256482	True	NA	10	True	AATAAA	-20	NA	37257752	37332970	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_37257974_37269593_37269651_37279303_37279612_37282881_37282953_37284335_37284465_37287006_37287073_37291242_37291358_37312917_37313025_37313815_37313892_37316702_37316831_37317110_37317207_37331043
transcript_170438.nic	chr6	+	2332	9	NIC	ENSG00000112130.17	novel	5616	8	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	125.668151792727	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTGCTCAGCTGGGCTT	NA	False	NA	12	True	AATAAA	-13	NA	37353923	37391231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_37354276_37359182_37359343_37360445_37360575_37368483_37369219_37371511_37371575_37374619_37374710_37376925_37377034_37381149_37381355_37390741
transcript_170446.known	chr6	+	2124	8	FSM	ENSG00000112130.17	ENST00000229866.10	2124	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	106.524118185048	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCTTACCTCTTCTTTG	37347682	True	NA	-51	True	NA	NA	NA	37354014	37391168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_37354276_37360445_37360575_37368377_37369219_37371511_37371575_37374619_37374710_37376925_37377034_37381149_37381355_37390741
transcript_170449.known	chr6	+	5616	8	FSM	ENSG00000112130.17	ENST00000373479.9	5616	8	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_1	40.4464877009975	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATCAAATGCCCATTTTC	37347650	True	NA	NA	False	AATAAA	-16	NA	37353982	37394734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_37354276_37360445_37360575_37368483_37369219_37371511_37371575_37374619_37374710_37376925_37377034_37381149_37381355_37390741
transcript_170456.known	chr6	+	1800	7	FSM	ENSG00000112130.17	ENST00000469731.5	1800	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	113.516029215653	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTGCTCAGCTGGGCTT	37347758	False	NA	12	True	AATAAA	-13	NA	37354090	37391231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_37354276_37360445_37360575_37368483_37369219_37371511_37371575_37374619_37374710_37376925_37377034_37390741
transcript_170457.nic	chr6	+	2063	7	NIC	ENSG00000112130.17	novel	5616	8	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_4	111.467110246326	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTGCTCAGCTGGGCTT	NA	False	NA	12	True	AATAAA	-13	NA	37353942	37391231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_37354276_37360445_37360575_37368483_37369219_37371511_37371575_37376925_37377034_37381149_37381355_37390741
transcript_170463.known	chr6	+	977	4	FSM	ENSG00000112130.17	ENST00000494320.5	977	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	104.416899441081	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCAAGTAAGACCACAGGG	37347646	True	NA	NA	False	NA	NA	NA	37353978	37368874	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_37354276_37359182_37359343_37360445_37360575_37368483
transcript_170466.nic	chr6	+	662	3	ISM	ENSG00000112130.17	ENST00000479516.1	1525	4	-129	1564	-36	145	5prime_fragment	FALSE	canonical	3	241	junction_1	7	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGGAATTGAGAACTAAAA	NA	False	NA	28	True	AATATA	-43	NA	37353942	37368683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_37354276_37360445_37360575_37368483
transcript_170470.known	chr6	+	4034	24	FSM	ENSG00000137200.13	ENST00000373451.9	4034	24	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_11	18.6546567720144	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGTGGCTCTGTGTT	37430344	True	NA	13	True	ATTAAA	-18	NA	37433220	37481508	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_37433378_37435623_37435763_37443998_37444151_37446290_37446450_37450250_37450344_37451805_37451878_37453046_37453142_37453239_37453313_37458611_37458811_37459565_37459685_37461548_37461646_37461969_37462103_37462828_37463009_37471020_37471078_37471846_37471905_37472418_37472488_37473469_37473602_37474523_37474647_37475320_37475413_37476125_37476195_37477591_37477640_37478408_37478522_37479146_37479256_37480012
transcript_170475.nic	chr6	+	4779	23	NIC	ENSG00000137200.13	novel	4034	24	NA	NA	-30	0	intron_retention	TRUE	canonical	3	114	junction_11	18.8870610307736	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGTGGCTCTGTGTT	37430312	True	NA	13	True	ATTAAA	-18	NA	37433188	37481508	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_37433378_37435623_37435763_37443998_37444151_37446290_37446450_37450250_37450344_37451805_37451878_37453046_37453142_37453239_37453313_37458611_37458811_37459565_37459685_37461548_37461646_37461969_37462103_37462828_37463009_37471020_37471078_37471846_37471905_37472418_37472488_37473469_37473602_37474523_37474647_37475320_37476195_37477591_37477640_37478408_37478522_37479146_37479256_37480012
transcript_170492.nnic	chr6	+	3733	20	NIC	ENSG00000137200.13	novel	4034	24	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	38.0225184773095	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGTGGCTCTGTGTT	37430312	True	NA	13	True	ATTAAA	-18	NA	37433188	37481508	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_37433378_37435623_37435763_37443998_37444151_37446290_37446450_37458611_37458811_37459565_37459685_37461548_37461646_37461969_37462103_37462828_37463009_37471020_37471078_37471846_37471905_37472418_37472488_37473469_37473602_37474523_37474647_37475320_37475413_37476125_37476195_37477591_37477640_37478408_37478522_37479146_37479256_37480012
transcript_170500.known	chr6	-	572	4	FSM	ENSG00000198937.9	ENST00000373408.4	572	4	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_3	34.08160142299	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCGTCTGCTGAGTAAATG	-37496410	True	NA	NA	False	AATAAA	-15	NA	37499893	37482937	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_37483290_37484809_37484863_37485099_37485195_37499821
transcript_170501.known	chr6	+	3138	6	FSM	ENSG00000156639.12	ENST00000287218.9	3138	6	0	0	0	0	multi-exon	TRUE	canonical	3	158	junction_1	10.9617516848358	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTTTTCTTGTTTCAC	37817495	True	NA	15	True	ATTAAA	-15	NA	37819726	38154624	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_37820017_37929958_37930000_38061592_38061776_38082391_38082458_38116571_38116740_38152234
transcript_170503.known	chr6	+	3001	5	FSM	ENSG00000156639.12	ENST00000373391.6	3001	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	62.2635527415518	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTTTTCTTGTTTCAC	37817566	True	NA	15	True	ATTAAA	-15	NA	37819797	38154624	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_37820017_37929958_37930000_38061592_38061776_38116571_38116740_38152234
transcript_170510.known	chr6	-	2016	6	FSM	ENSG00000124767.7	ENST00000373365.5	2016	6	0	0	0	0	multi-exon	FALSE	canonical	3	1205	junction_3	106.558903898267	1312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTCCATCATGTTCTT	-38661254	True	NA	0	True	AATAAA	-37	NA	38703145	38675924	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_38677384_38682011_38682102_38682807_38682876_38684373_38684515_38686891_38686975_38702970
transcript_170512.nic	chr6	-	387	3	ISM	ENSG00000124767.7	ENST00000373365.5	2016	6	-31	8492	-31	-8474	5prime_fragment	FALSE	canonical	3	1435	junction_1	18.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTGGGCGCTCTCCAGA	-38661285	True	NA	NA	False	GATAAA	-32	NA	38703176	38684416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_38684515_38686891_38686975_38702970
transcript_170513.known	chr6	+	6682	13	FSM	ENSG00000112164.6	ENST00000373256.5	6682	13	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_4	2.12132034355964	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTGCTCTTCCTTTGCG	39048422	True	NA	5	True	AATAAA	-18	NA	39048780	39091303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_39048919_39056396_39056494_39057471_39057580_39065710_39065830_39066196_39066304_39072861_39073016_39073609_39073770_39078321_39078383_39078956_39079027_39079111_39079201_39079563_39079703_39080697_39080740_39085905
transcript_170518.known	chr6	-	2018	2	FSM	ENSG00000112167.10	ENST00000229903.5	2018	2	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTTTGTTGACTGATTTA	-39114253	True	NA	-1	True	ATTAAA	-28	NA	39115186	39104062	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_39105777_39114882
transcript_170522.nnic	chr6	-	3635	6	NNC	ENSG00000164626.9	novel	3783	5	NA	NA	-54	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_5	47.7116338014116	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGTGTGTGCTGTGTGT	-39225264	True	NA	-1	True	AATAAA	-20	NA	39229529	39188970	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_39191756_39194168_39194338_39194593_39194761_39195875_39195988_39228925_39229039_39229240
transcript_170523.nnic	chr6	-	3712	6	NNC	ENSG00000164626.9	novel	3783	5	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	49.6628633890556	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGTGTGTGCTGTGTGT	-39225248	True	NA	-1	True	AATAAA	-20	NA	39229513	39188970	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_39191756_39194168_39194338_39194593_39194761_39195875_39195988_39228925_39229132_39229240
transcript_170527.known	chr6	-	3783	5	FSM	ENSG00000164626.9	ENST00000359534.4	3783	5	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	11.9451873154003	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGTGTGTGCTGTGTGT	-39225210	True	NA	-1	True	AATAAA	-20	NA	39229475	39188970	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_39191756_39194168_39194338_39194593_39194761_39195875_39195988_39228925
transcript_170530.nnic	chr6	-	3702	4	NIC	ENSG00000164626.9	novel	3783	5	NA	NA	-88	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	60.642852468824	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGTGTGTGCTGTGTGT	-39229538	False	NA	-1	True	AATAAA	-20	NA	39229563	39188970	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_39191756_39194593_39194761_39195875_39195988_39228925
transcript_170531.nnic	chr6	-	3533	3	NIC	ENSG00000164626.9	novel	3783	5	NA	NA	-88	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	57	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTTGGTGTGTGCTGTGT	-39229538	False	NA	-3	True	AATAAA	-18	NA	39229563	39188972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_39191756_39195875_39195988_39228925
transcript_170533.known	chr6	-	1524	5	FSM	ENSG00000124780.14	ENST00000373231.9	1524	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	2.69258240356725	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGGGTTTTTCTGTCA	-39314178	True	NA	-3	True	AATAAA	-20	NA	39314419	39299000	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_39299738_39303956_39304132_39304494_39304656_39310892_39311008_39314083
transcript_170535.known	chr6	+	2186	3	FSM	ENSG00000146122.17	ENST00000475489.5	2186	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAT	39792208	True	NA	NA	False	NA	NA	NA	39792395	39862819	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_39792466_39856246_39856471_39860927
transcript_170539.known	chr6	-	3358	11	FSM	ENSG00000124615.20	ENST00000373188.6	3358	11	0	0	0	0	multi-exon	TRUE	canonical	3	93	junction_1	13.9728307797669	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGACAATTTGTGATATA	NA	False	NA	NA	False	ATTAAA	-16	NA	39934551	39905058	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_39907118_39909039_39909103_39909834_39909956_39912263_39912375_39912891_39913005_39913316_39913429_39913773_39913836_39916067_39916233_39925677_39925846_39927328_39927456_39934294
transcript_170541.nic	chr6	-	2925	10	NIC	ENSG00000124615.20	novel	3358	11	NA	NA	-7	3	combination_of_known_junctions	FALSE	canonical	3	31	junction_9	32.3457402694736	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCACCATCTAAGGGAAATC	-39931928	True	NA	-15	True	AATAAA	-22	NA	39934504	39905317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_39907118_39909039_39909103_39909834_39909956_39912263_39912375_39912891_39913005_39913316_39913429_39913773_39913836_39916067_39916233_39925677_39925846_39934294
transcript_170543.nic	chr6	-	2997	10	NIC	ENSG00000124615.20	novel	3358	11	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	34.4956608471841	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGCACCATCTAAGGGAA	-39931939	True	NA	-18	True	AATAAA	-19	NA	39934515	39905320	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_39907118_39909834_39909956_39912263_39912375_39912891_39913005_39913316_39913429_39913773_39913836_39916067_39916233_39925677_39925846_39927328_39927456_39934294
transcript_170544.nic	chr6	-	2795	10	NIC	ENSG00000124615.20	novel	3358	11	NA	NA	-18	-202	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	34.4956608471841	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGCAAGAATGAAGACACT	-39931939	True	NA	NA	False	AATAAA	-21	NA	39934515	39905522	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_39907118_39909834_39909956_39912263_39912375_39912891_39913005_39913316_39913429_39913773_39913836_39916067_39916233_39925677_39925846_39927328_39927456_39934294
transcript_170545.nic	chr6	-	2713	10	NIC	ENSG00000124615.20	novel	3358	11	NA	NA	-7	-209	combination_of_known_junctions	FALSE	canonical	3	31	junction_9	32.3457402694736	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTGCAGATGCAAGAATGA	-39931928	True	NA	NA	False	AATAAA	-14	NA	39934504	39905529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_39907118_39909039_39909103_39909834_39909956_39912263_39912375_39912891_39913005_39913316_39913429_39913773_39913836_39916067_39916233_39925677_39925846_39934294
transcript_170548.known	chr6	-	2852	9	FSM	ENSG00000124615.20	ENST00000373195.7	2852	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	45.8768732587564	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGCACCATCTAAGGGAA	-39931921	True	NA	-18	True	AATAAA	-19	NA	39934497	39905320	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_39907118_39909834_39909956_39912263_39912375_39912891_39913005_39913316_39913429_39913773_39913836_39916067_39916233_39925677_39925846_39934294
transcript_170553.known	chr6	-	420	1	FSM	ENSG00000180211.5	ENST00000325612.5	420	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCTCCAGTATATTTGT	NA	False	NA	-41	True	NA	NA	NA	39958833	39958413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_39958400_39958800
transcript_170556.known	chr6	-	3164	3	FSM	ENSG00000156564.9	ENST00000338305.7	3164	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	2.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGACTCCTCCTCTTCA	-40587331	False	NA	46	True	NA	NA	NA	40587364	40391590	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_40392913_40431713_40433132_40586940
transcript_17056.nic	chr1	+	1439	7	ISM	ENSG00000094975.14	ENST00000616058.4	5495	22	-265	42689	-265	-1371	5prime_fragment	FALSE	canonical	3	137	junction_2	16.7373501155018	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGAAGTATTTGAGTTC	NA	False	NA	20	True	AAAAAG	-7	NA	172532852	172569142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_172533498_172551511_172551627_172553259_172553371_172555868_172556024_172557279_172557418_172557643_172557795_172569018
transcript_170560.known	chr6	+	6209	10	FSM	ENSG00000001167.15	ENST00000341376.11	6209	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	41.9217377832245	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTATCTCAAGTGTGTATTC	41070780	True	NA	11	True	AATAAA	-21	NA	41072973	41102403	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_41073085_41079028_41079165_41080810_41080898_41084045_41084193_41089578_41089711_41090203_41090310_41091527_41091695_41092911_41093086_41094395_41094498_41097356
transcript_170564.known	chr6	+	1660	9	FSM	ENSG00000001167.15	ENST00000353205.5	1660	9	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	12.7567384154415	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATCTGTGGTAATAATAAG	41070789	True	NA	NA	False	AATAAA	-20	NA	41072982	41097950	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_41073085_41079028_41079165_41084045_41084193_41089578_41089711_41090203_41090310_41091527_41091695_41092911_41093086_41094395_41094498_41097356
transcript_17057.nic	chr1	+	1168	6	ISM	ENSG00000094975.14	ENST00000610051.5	2925	23	-170	41137	-105	-1371	5prime_fragment	FALSE	canonical	3	43	junction_2	54.1021256514012	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGAAGTATTTGAGTTC	172532809	True	NA	20	True	AAAAAG	-7	NA	172533012	172569142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_172533498_172551511_172551627_172555868_172556024_172557279_172557418_172557643_172557795_172569018
transcript_170572.known	chr6	-	3184	6	FSM	ENSG00000124596.17	ENST00000424266.7	3184	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	116.576841611016	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGATGTGGCTACCTTA	-41072345	False	NA	-20	True	AATAAA	-26	NA	41072356	41064771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_41067438_41068840_41068954_41070075_41070135_41071131_41071277_41071595_41071676_41072235
transcript_170573.known	chr6	-	1515	6	FSM	ENSG00000124596.17	ENST00000463088.5	1515	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	135.24407565583	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCTTATGAGTCTTC	-41071907	True	NA	-7	True	AATAAA	-13	NA	41072489	41066474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_41067438_41068840_41068954_41070075_41070135_41071131_41071277_41071595_41071676_41072334
transcript_170577.known	chr6	-	1188	5	FSM	ENSG00000124596.17	ENST00000628419.2	1188	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	117.020030336691	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAGGTTCTGTGCTTATG	-41072566	False	NA	-8	True	AATAAA	-14	NA	41072577	41066792	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_41067438_41070075_41070135_41071131_41071277_41071595_41071676_41072318
transcript_170582.known	chr6	-	401	3	FSM	ENSG00000124596.17	ENST00000471367.1	401	3	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_2	97.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCTAAGAACCAAATGTTT	-41072309	False	NA	-8	True	AATAAA	-21	NA	41072320	41071040	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_41071277_41071595_41071676_41072235
transcript_170583.known	chr6	-	704	3	FSM	ENSG00000124596.17	ENST00000469104.5	704	3	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_2	90.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTGCTTTCTCTTCAAA	-41071908	True	NA	NA	False	NA	NA	NA	41072490	41070824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_41071277_41071595_41071676_41072318
transcript_170584.known	chr6	-	983	5	FSM	ENSG00000095970.17	ENST00000373113.8	983	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTTTGGGCATCATGAAA	NA	False	NA	NA	False	AATAAA	-26	NA	41163116	41158507	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_41158781_41158872_41159067_41159791_41159883_41161262_41161614_41163042
transcript_17059.nic	chr1	+	761	4	ISM	ENSG00000094975.14	ENST00000616058.4	5495	22	0	55808	0	3871	5prime_fragment	FALSE	canonical	3	137	junction_2	18.9267594221045	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTTGTTACAAAAAACA	172529891	True	NA	NA	False	NA	NA	NA	172533117	172556023	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_172533498_172551511_172551627_172553259_172553371_172555868
transcript_170591.known	chr6	+	1913	6	FSM	ENSG00000112559.15	ENST00000419164.6	1913	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	105.755567229343	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCCTCAGGACTCATGA	41636628	True	NA	11	True	AATAAA	-18	NA	41637017	41654244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_41637274_41638139_41638376_41638738_41638826_41646125_41646309_41649618_41649844_41653318
transcript_170598.known	chr6	+	703	5	FSM	ENSG00000112559.15	ENST00000432027.5	703	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	95.6255718937147	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTGCGACCTGGACTGC	41636866	False	NA	NA	False	NA	NA	NA	41636881	41653474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_41636934_41638738_41638826_41646125_41646309_41649618_41649844_41653318
transcript_170599.known	chr6	+	1622	5	FSM	ENSG00000112559.15	ENST00000373051.6	1622	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	95.6255718937147	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGATTTCCTCAGGACT	41636678	False	NA	6	True	AATAAA	-13	NA	41637067	41654239	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_41637274_41638738_41638826_41646125_41646309_41649618_41649844_41653318
transcript_1706.nic	chr1	-	3627	6	NIC	ENSG00000227372.12	novel	2363	6	NA	NA	-14	0	intron_retention	FALSE	canonical	3	19	junction_3	71.4601987122902	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGCTGAAAGCACTC	-3741589	True	NA	-16	True	TTTAAA	-19	NA	3747387	3737148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_3738514_3740232_3740388_3742429_3742518_3742803_3742912_3743060_3743191_3745606
transcript_17060.nic	chr1	+	696	3	ISM	ENSG00000094975.14	ENST00000616058.4	5495	22	-129	58500	-129	1179	5prime_fragment	FALSE	canonical	3	137	junction_2	23	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAACATAAATTAAAAGATGA	172532923	True	NA	NA	False	NA	NA	NA	172532988	172553331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_172533498_172551511_172551627_172553259
transcript_170602.known	chr6	+	650	3	FSM	ENSG00000112559.15	ENST00000435476.1	650	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	116.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTCTGGCGAGTGTGCC	41632078	False	NA	NA	False	NA	NA	NA	41638526	41653444	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_41638826_41649618_41649844_41653318
transcript_170603.known	chr6	+	1606	5	FSM	ENSG00000112559.15	ENST00000230321.11	1606	5	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	25.907286619791	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCCTCAGGACTCATGA	41632019	True	NA	11	True	AATAAA	-18	NA	41638467	41654244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_41638653_41638738_41638826_41646125_41646309_41649618_41649844_41653318
transcript_170606.known	chr6	-	2333	9	FSM	ENSG00000112561.19	ENST00000373033.6	2333	9	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	3.37036719067819	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGGTCCTGTCTCTTT	-41735541	False	67	0	True	AGTAAA	-15	NA	41735608	41683977	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_41685079_41686089_41686238_41687093_41687170_41687752_41687810_41687907_41688029_41689730_41689812_41690662_41690918_41691000_41691236_41735349
transcript_170607.known	chr6	-	2188	9	FSM	ENSG00000112561.19	ENST00000358871.6	2188	9	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	3.73329613076702	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGGTCCTGTCTCTTT	-41736192	True	NA	0	True	AGTAAA	-15	NA	41736259	41683977	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_41685079_41686089_41686238_41687093_41687170_41687752_41687810_41687907_41688029_41689730_41689812_41690662_41690918_41691000_41691236_41736145
transcript_170616.known	chr6	-	3177	7	FSM	ENSG00000164663.15	ENST00000373006.5	3177	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	2.91070819942883	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGCACTTACTATGTTCT	-41894975	False	NA	NA	False	AATAAA	-15	NA	41895361	41797644	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_41798930_41799829_41799939_41803805_41804011_41805627_41807012_41871563_41871638_41891793_41891876_41895323
transcript_170627.known	chr6	-	2174	7	FSM	ENSG00000137218.10	ENST00000373018.7	2174	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_6	6.82316316348624	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGTGGATATCATCTTC	-41779599	True	NA	NA	False	AATATA	-18	NA	41779900	41770175	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_41771534_41771815_41771965_41772797_41772960_41775418_41775606_41776921_41777011_41778032_41778177_41779815
transcript_17063.known	chr1	+	756	2	FSM	ENSG00000094975.14	ENST00000608566.1	756	2	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTACTGAAGTAATTTATA	172530156	False	NA	NA	False	NA	NA	NA	172533382	172552152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_172533498_172551511
transcript_170630.known	chr6	+	637	3	FSM	ENSG00000214736.8	ENST00000398884.7	637	3	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_2	500.5	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTATTCTTTTAATAAGA	41766950	True	NA	34	True	AATAAA	-21	NA	41787661	41789898	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_41787826_41789231_41789337_41789530
transcript_170631.known	chr6	+	565	3	FSM	ENSG00000214736.8	ENST00000398881.4	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	986	junction_2	316.5	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTTTATTCTTTTAATA	41766982	True	NA	31	True	AATAAA	-18	NA	41787693	41789895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_41787826_41789231_41789337_41789567
transcript_170632.nic	chr6	-	2223	3	ISM	ENSG00000288721.1	ENST00000683313.1	1190	6	-2	98817	-2	-98817	5prime_fragment	FALSE	canonical	3	15	junction_1	177	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCTTTTTGGCCTCCTGA	-41917439	True	NA	-23	True	AATAAA	-12	NA	41921141	41905356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_41907288_41916784_41916940_41921004
transcript_170634.known	chr6	-	2478	4	FSM	ENSG00000124641.16	ENST00000265350.9	2478	4	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_2	13.2748718344933	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTTGGCCTCCTGATTT	-41917437	True	NA	-20	True	AATAAA	-15	NA	41921139	41905353	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_41907288_41909268_41909523_41916784_41916940_41921004
transcript_170636.known	chr6	-	932	4	FSM	ENSG00000124641.16	ENST00000409312.5	932	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	158.191866626153	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGACCTTGCCTCCTTTA	-41917417	True	NA	NA	False	NA	NA	NA	41921119	41906803	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_41907288_41909344_41909523_41916784_41916940_41921004
transcript_170637.known	chr6	-	1481	3	FSM	ENSG00000124641.16	ENST00000482361.1	1481	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	162	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCACTGTGGCCACACTT	-41917437	True	NA	NA	False	AAAAAG	-20	NA	41921139	41906195	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_41907288_41909268_41909523_41921004
transcript_170638.known	chr6	-	815	3	FSM	ENSG00000124641.16	ENST00000409060.1	815	3	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_1	15.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCCCCCCAAAGTGCTG	-41917391	True	NA	NA	False	NA	NA	NA	41921093	41908951	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_41909523_41916784_41916940_41921004
transcript_170643.nnic	chr6	+	2652	8	NNC	ENSG00000112578.10	novel	1718	7	NA	NA	-304	1333	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	70.9757072554276	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGACTTCATGTTTGCTTG	41921174	False	NA	6	True	AATATA	-24	NA	41921194	41934379	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_41921831_41927373_41927537_41930131_41930271_41930634_41930769_41931395_41931557_41931727_41931831_41932360_41933344_41934046
transcript_170645.nnic	chr6	+	2643	8	NNC	ENSG00000112578.10	novel	1718	7	NA	NA	-304	1326	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	70.9757072554276	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAACGCAGACTTCATGT	41921174	False	NA	-1	True	AATATA	-17	NA	41921194	41934372	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_41921831_41927373_41927537_41930131_41930271_41930634_41930769_41931395_41931557_41931727_41931831_41932360_41933356_41934060
transcript_170652.known	chr6	+	1718	7	FSM	ENSG00000112578.10	ENST00000230340.9	1718	7	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	13.4866188827626	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTGTTTGGTGTAGTC	41919049	True	NA	18	True	GATAAA	-24	NA	41921498	41933046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_41921831_41927373_41927537_41930131_41930271_41930634_41930769_41931395_41931557_41931727_41931831_41932360
transcript_170656.known	chr6	+	1153	6	FSM	ENSG00000112578.10	ENST00000489290.1	1153	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	76.5992167061779	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTGCAGTCCCCCGCGA	41919084	True	NA	NA	False	NA	NA	NA	41921533	41932655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_41921831_41927373_41927537_41930634_41930769_41931395_41931557_41931727_41931831_41932360
transcript_170660.known	chr6	-	2233	5	FSM	ENSG00000112576.13	ENST00000372987.8	2233	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	104.156132800714	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGGCTTTGGCTTCTT	-41938789	False	NA	-22	True	AATAAA	-15	NA	41941519	41934955	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_41936108_41936558_41936696_41937234_41937395_41940369_41940586_41940951
transcript_170661.known	chr6	-	2026	5	FSM	ENSG00000112576.13	ENST00000372991.9	2026	5	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_2	10.779030568655	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTTTGGCTTCTTGGAT	-41939078	True	NA	-18	True	AATAAA	-19	NA	41941808	41934951	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_41936108_41936558_41936696_41937234_41937395_41940369_41940586_41941451
transcript_170665.known	chr6	-	1724	4	FSM	ENSG00000112576.13	ENST00000414200.6	1724	4	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_3	108.10283170307	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTACTGTAATAAAGATGA	-41939025	True	NA	-51	True	NA	NA	NA	41941755	41934984	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_41936108_41936558_41936696_41937234_41937395_41941451
transcript_170666.known	chr6	-	1843	4	FSM	ENSG00000112576.13	ENST00000415497.6	1843	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	111.398184704938	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGGCTTTGGCTTCTT	-42048867	False	NA	-22	True	AATAAA	-15	NA	42048894	41934955	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_41936108_41936558_41936696_41937234_41937395_42048500
transcript_170667.nic	chr6	-	1968	4	NIC	ENSG00000112576.13	novel	2026	5	NA	NA	-79	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	109.693512418313	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTTTGGCTTCTTGGAT	-41939157	True	NA	-18	True	AATAAA	-19	NA	41941887	41934951	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_41936108_41937234_41937395_41940369_41940586_41941451
transcript_170687.known	chr6	+	794	5	FSM	ENSG00000137413.17	ENST00000372978.7	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_2	4.12310562561766	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGATTATCTTTCATAAT	42050490	False	NA	NA	False	AATAAA	-23	NA	42050512	42057789	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_42050587_42051356_42051514_42055530_42055630_42055951_42056015_42057388
transcript_170688.known	chr6	-	894	3	FSM	ENSG00000188112.9	ENST00000356542.5	894	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	5.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGTGTGGTGGCTCATG	-42137256	True	NA	54	True	AATAAA	-32	NA	42142619	42126376	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_42126844_42128671_42128779_42142299
transcript_170689.known	chr6	-	6385	5	FSM	ENSG00000188112.9	ENST00000341865.9	6385	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	27.3986769753578	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGACGTCATACTTTTAG	-42137257	True	NA	NA	False	CATAAA	-20	NA	42142620	42101118	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_42103879_42104462_42107584_42110215_42110292_42128671_42128779_42142299
transcript_17069.known	chr1	+	1690	5	FSM	ENSG00000117592.9	ENST00000340385.6	1690	5	0	0	0	0	multi-exon	FALSE	canonical	3	3684	junction_2	175.869269629461	1570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTGTCATATTTTGAA	173445783	True	NA	28	True	AATAAA	-28	NA	173477334	173488815	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_173477493_173481325_173481483_173485360_173485508_173486254_173486402_173487734
transcript_170691.known	chr6	+	2520	3	FSM	ENSG00000048545.17	ENST00000679182.1	2520	3	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_2	6	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTGGCAAGCACGGTGAA	NA	False	NA	NA	False	NA	NA	NA	42178099	42181338	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_42178430_42178801_42178896_42179242
transcript_170698.known	chr6	-	2100	7	FSM	ENSG00000048544.6	ENST00000053468.4	2100	7	0	0	0	0	multi-exon	TRUE	canonical	3	749	junction_5	35.8685873091701	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGCTCAGTTGTTGAC	-42210826	True	NA	-10	True	ATTAAA	-26	NA	42217861	42206806	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_42208373_42208857_42208948_42210487_42210597_42211780_42211918_42214119_42214193_42214279_42214345_42217801
transcript_170704.nnic	chr6	-	2072	6	NIC	ENSG00000048544.6	novel	2100	7	NA	NA	-45	0	combination_of_known_splicesites	FALSE	canonical	3	61	junction_4	307.159632764463	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGCTCAGTTGTTGAC	-42210871	True	NA	-10	True	ATTAAA	-26	NA	42217906	42206806	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_42208373_42208857_42208948_42210487_42210597_42211780_42211918_42214279_42214345_42217801
transcript_170713.known	chr6	-	7646	18	FSM	ENSG00000124496.12	ENST00000541110.5	7646	18	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_17	32.7720448006411	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTGGCTTAAATATTTCT	-42452025	False	NA	-10	True	AATAAA	-20	NA	42452051	42224930	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_42228670_42232680_42232893_42236204_42236412_42243247_42243362_42246455_42246545_42254850_42254927_42256727_42256832_42256962_42257103_42258134_42258202_42259338_42259724_42263259_42263569_42264703_42264855_42265750_42265798_42268153_42269849_42300637_42300750_42362996_42363080_42451176_42451262_42452020
transcript_170716.nnic	chr6	-	4498	18	NNC	ENSG00000124496.12	novel	7286	18	NA	NA	234	0	intron_retention	FALSE	canonical	3	17	junction_17	32.4507612100885	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTAAGAGGTGTTTCATC	-42451409	True	NA	-17	True	AATAAA	-16	NA	42451811	42228125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_42228670_42232680_42232893_42236204_42236412_42243247_42243362_42246455_42246545_42254850_42254927_42256727_42256832_42256962_42257103_42258134_42258202_42259338_42259724_42263319_42263569_42264703_42264855_42265750_42265798_42268153_42269849_42300637_42300750_42362996_42363080_42451176_42451262_42451673
transcript_170717.known	chr6	-	7286	18	FSM	ENSG00000124496.12	ENST00000372922.8	7286	18	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_17	34.4436755008364	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	-42452019	False	NA	NA	False	AATAAA	-43	NA	42452045	42225224	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_42228670_42232680_42232893_42236204_42236412_42243247_42243362_42246455_42246545_42254850_42254927_42256727_42256832_42256962_42257103_42258134_42258202_42259338_42259724_42263319_42263569_42264703_42264855_42265750_42265798_42268153_42269849_42300637_42300750_42362996_42363080_42451176_42451262_42452020
transcript_170751.nic	chr6	-	2026	2	ISM	ENSG00000124496.12	ENST00000340840.6	4174	16	-264	133254	-264	-133254	5prime_fragment	FALSE	canonical	3	88	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGTAAGTGCCAGGAAG	-42449860	True	NA	NA	False	CATAAA	-7	NA	42451525	42361402	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_42363080_42451176
transcript_170752.known	chr6	+	7891	47	FSM	ENSG00000024048.11	ENST00000372901.2	7891	47	0	0	0	0	multi-exon	TRUE	canonical	3	57	junction_8	17.4604061951335	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGGTTAGCATATATCT	42560424	True	NA	6	True	AATAAA	-21	NA	42564028	42693505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_42564398_42573733_42573994_42592150_42592230_42594190_42594305_42603587_42603719_42605720_42605860_42606588_42606652_42612170_42612292_42615070_42615179_42616001_42616091_42617408_42617508_42632551_42632716_42632804_42632905_42635417_42635547_42637010_42637195_42640208_42640271_42641581_42641693_42642415_42642482_42644213_42644337_42644472_42644537_42645465_42645591_42648117_42648171_42650283_42650387_42652022_42652072_42652490_42652646_42655620_42655724_42658023_42658134_42658239_42658321_42658645_42658825_42659655_42659856_42662183_42662278_42663257_42663420_42665408_42665513_42666166_42666246_42670091_42670241_42670659_42670716_42673790_42673888_42674125_42674194_42676055_42676192_42676782_42676874_42678538_42678670_42679723_42679833_42683054_42683112_42684793_42684872_42688215_42688387_42689568_42689671_42691031
transcript_170755.known	chr6	-	1606	1	FSM	ENSG00000124659.7	ENST00000372876.2	1606	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATGGGTTTGTTTGGTGT	-42742684	True	NA	-39	True	AATAAA	-17	NA	42746103	42744497	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_42744500_42746100
transcript_170763.known	chr6	+	3769	7	FSM	ENSG00000146223.16	ENST00000304734.9	3769	7	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_6	144.823743449293	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGTTGAACAAGTTGTGAG	42879666	False	NA	54	True	NA	NA	NA	42879681	42889925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_42879952_42880860_42880967_42883450_42883615_42884612_42884751_42885973_42886084_42886255_42886471_42887159
transcript_170769.nnic	chr6	+	2767	7	NNC	ENSG00000146223.16	novel	4499	6	NA	NA	0	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	188.067954621609	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCGCACTTATATGTATGT	42879158	True	NA	18	True	AATAAA	-15	NA	42879615	42889889	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_42879952_42880860_42880967_42883450_42883615_42884612_42884751_42885973_42886084_42886255_42886706_42888426
transcript_170777.known	chr6	+	4499	6	FSM	ENSG00000146223.16	ENST00000493763.7	4499	6	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_2	51.2109363319985	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTATGTACCATGACATA	42879158	True	NA	29	True	AATAAA	-26	NA	42879615	42889900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_42879952_42880860_42880967_42883450_42883615_42884612_42884751_42885973_42886084_42886255
transcript_170781.known	chr6	+	1702	6	FSM	ENSG00000146223.16	ENST00000397415.7	1702	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	196.820324153782	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATTGCTGCAGTCATTCA	42879181	True	NA	NA	False	NA	NA	NA	42879638	42887010	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_42879952_42880860_42881083_42883450_42883615_42884612_42884751_42885973_42886084_42886255
transcript_170784.known	chr6	+	1103	6	FSM	ENSG00000146223.16	ENST00000483998.6	1103	6	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	210.62440504367	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGTCGTGGTGGCTCATG	42879160	True	NA	NA	False	AAGAAA	-13	NA	42879617	42887301	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_42879952_42883450_42883615_42884612_42884751_42885973_42886084_42886255_42886471_42887159
transcript_170794.known	chr6	+	703	5	FSM	ENSG00000146223.16	ENST00000602561.1	703	5	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_2	55.7673739743947	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAGGGAAGTTTGGCGTC	42877413	True	NA	24	True	AATAAA	-21	NA	42879932	42886249	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_42879952_42880860_42880967_42883450_42883615_42884612_42884751_42885973
transcript_170796.nic	chr6	+	1337	5	ISM	ENSG00000146223.16	ENST00000483998.6	1103	6	-2	457	0	-166	5prime_fragment	FALSE	canonical	3	78	junction_1	195.661697835831	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCTGGGTGTGGTGGCGC	42879158	True	NA	NA	False	AATACA	-5	NA	42879615	42886844	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_42879952_42883450_42883615_42884612_42884751_42885973_42886084_42886255
transcript_170797.nic	chr6	+	1503	5	ISM	ENSG00000146223.16	ENST00000483998.6	1103	6	-2	291	0	0	5prime_fragment	FALSE	canonical	3	78	junction_1	195.661697835831	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATTGCTGCAGTCATTCA	42879158	True	NA	NA	False	NA	NA	NA	42879615	42887010	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_42879952_42883450_42883615_42884612_42884751_42885973_42886084_42886255
transcript_170799.known	chr6	-	557	1	FSM	ENSG00000221821.4	ENST00000408925.4	557	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCCCCAGAATGATTTT	-42889992	True	NA	-1	True	AATAAA	-17	NA	42890821	42890264	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_42890300_42890800
transcript_170802.nnic	chr6	+	1556	7	NNC	ENSG00000137161.18	novel	1431	6	NA	NA	-63	0	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_2	301.181930991146	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGCCTCTTGTTCTTT	42919367	True	NA	50	True	NA	NA	NA	42929416	42939294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_42929722_42934474_42934599_42935411_42935474_42935573_42935671_42937716_42937840_42938089_42938208_42938567
transcript_170810.known	chr6	+	1431	6	FSM	ENSG00000137161.18	ENST00000372836.5	1431	6	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_2	84.1817082269064	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGCCTCTTGTTCTTT	42919430	True	NA	50	True	NA	NA	NA	42929479	42939294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_42929722_42934474_42934599_42935573_42935671_42937716_42937840_42938089_42938208_42938567
transcript_170812.nnic	chr6	+	1698	6	NNC	ENSG00000137161.18	novel	1431	6	NA	NA	-329	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	332.430804830118	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGCCTCTTGTTCTTT	42928860	True	NA	50	True	NA	NA	NA	42929150	42939294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_42929722_42935411_42935474_42935573_42935671_42937716_42937840_42938089_42938208_42938567
transcript_170817.nnic	chr6	+	1652	5	NIC	ENSG00000137161.18	novel	1431	6	NA	NA	-345	0	combination_of_known_splicesites	FALSE	canonical	3	46	junction_1	290.342900722577	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGCCTCTTGTTCTTT	42928844	True	NA	50	True	NA	NA	NA	42929134	42939294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_42929722_42935573_42935671_42937716_42937840_42938089_42938208_42938567
transcript_170822.known	chr6	-	653	2	FSM	ENSG00000287825.2	ENST00000667155.2	660	2	0	7	0	-7	multi-exon	FALSE	canonical	3	37	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGGGCTTGGTGGCTCAC	-42929367	False	NA	NA	False	AATAAA	-27	NA	42929457	42928286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_42928647_42929164
transcript_170824.known	chr6	-	3444	17	FSM	ENSG00000124587.14	ENST00000304611.13	3444	17	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_12	2.92016159655592	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATATTGTTTACCCTTC	-42978709	True	NA	-1	True	AATAAA	-26	NA	42979181	42963864	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_42964472_42964789_42964930_42965074_42965153_42965251_42965369_42965680_42965790_42966043_42966106_42966241_42966448_42966524_42966658_42966781_42966859_42967367_42967564_42968289_42968499_42968873_42968986_42969667_42969802_42969884_42969988_42974002_42974087_42974874_42975039_42978268
transcript_17083.known	chr1	+	809	2	FSM	ENSG00000117592.9	ENST00000460950.1	809	2	0	0	0	0	multi-exon	FALSE	canonical	3	3970	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCATCTCTCCTGGGATGT	173445778	True	NA	NA	False	NA	NA	NA	173477329	173481971	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_173477493_173481325
transcript_170842.known	chr6	+	1076	6	FSM	ENSG00000124713.6	ENST00000372808.4	1076	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	4.07921561087423	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTGTGTTTATTTATGT	42960528	True	NA	6	True	AATATA	-20	NA	42960753	42963880	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_42960974_42962211_42962340_42962761_42962879_42963071_42963215_42963327_42963450_42963534
transcript_17085.nic	chr1	+	2397	13	NIC	ENSG00000076321.11	novel	3414	12	NA	NA	10	0	combination_of_known_junctions	TRUE	canonical	2	9	junction_1	15.6622334153069	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAGAAAAAATTCCA	173713374	True	NA	NA	False	NA	NA	NA	173714950	173785513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_173715079_173715522_173715655_173716002_173716067_173733712_173734287_173751763_173751923_173753212_173753308_173755922_173756039_173756975_173757160_173766145_173766290_173774304_173774439_173775633_173775843_173782123_173782231_173785162
transcript_170850.known	chr6	+	2894	16	FSM	ENSG00000112640.16	ENST00000394110.7	2894	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	105.414609993112	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGATGTGCCTTGATGTG	42978730	True	NA	22	True	AATAAA	-16	NA	42984552	43012342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_42984705_42989610_42989689_43006462_43006607_43006933_43007111_43007195_43007307_43007413_43007507_43007934_43008066_43008200_43008261_43008366_43008476_43008692_43008747_43009056_43009228_43009321_43009450_43010467_43010570_43010663_43010737_43010880_43010998_43011148
transcript_170853.known	chr6	+	2973	16	FSM	ENSG00000112640.16	ENST00000485511.6	2973	16	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_3	34.1701624227922	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGATGTGCCTTGATGTG	42978747	True	NA	22	True	AATAAA	-16	NA	42984569	43012342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_42984705_42989610_42989689_43006462_43006680_43006910_43007111_43007195_43007307_43007413_43007507_43007934_43008066_43008200_43008261_43008366_43008476_43008692_43008747_43009056_43009228_43009321_43009450_43010467_43010570_43010663_43010737_43010880_43010998_43011148
transcript_170854.known	chr6	+	2963	16	FSM	ENSG00000112640.16	ENST00000472118.5	2963	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	106.375561103103	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTGATGTGCCTTGATG	42978731	True	NA	20	True	AATAAA	-14	NA	42984553	43012340	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_42984705_42989610_42989689_43006486_43006680_43006910_43007111_43007195_43007307_43007413_43007507_43007934_43008066_43008200_43008261_43008366_43008476_43008692_43008747_43009056_43009228_43009321_43009450_43010467_43010570_43010663_43010737_43010880_43010998_43011148
transcript_17088.known	chr1	+	3414	12	FSM	ENSG00000076321.11	ENST00000209884.5	3414	12	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	8.19191296441368	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGCTAATGCTTTTTAT	173713404	True	NA	NA	False	AATAAA	-24	NA	173714980	173786692	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_173715079_173716002_173716067_173733712_173734287_173751763_173751923_173753212_173753308_173755922_173756039_173756975_173757160_173766145_173766290_173774304_173774439_173775633_173775843_173782123_173782231_173785162
transcript_170882.known	chr6	+	1869	11	FSM	ENSG00000124702.19	ENST00000326974.9	1869	11	0	0	0	0	multi-exon	FALSE	canonical	3	1249	junction_3	62.3795639612846	3195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTTGTGTGTTTTTGTGG	42992404	True	NA	23	True	ATTAAA	-10	NA	43014248	43021294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43014349_43017133_43017347_43017518_43017696_43017852_43017969_43018144_43018217_43018342_43018557_43018632_43018720_43018862_43018972_43019091_43019166_43019287_43019367_43020666
transcript_170895.known	chr6	+	1903	10	FSM	ENSG00000124702.19	ENST00000244670.12	1903	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	433.449215274664	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGTTTTTGTGGAATA	43014092	False	NA	27	True	ATTAAA	-14	NA	43014102	43021298	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43014349_43017133_43017347_43017518_43017696_43018144_43018217_43018342_43018557_43018632_43018720_43018862_43018972_43019091_43019166_43019287_43019367_43020666
transcript_170908.known	chr6	-	2018	4	FSM	ENSG00000124733.5	ENST00000244711.4	2018	4	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_3	654.830936620709	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAATAGGGACAAGGTGAG	-42992618	True	NA	NA	False	NA	NA	NA	43013946	43011142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43012622_43012925_43013029_43013114_43013390_43013785
transcript_170909.known	chr6	-	1004	4	FSM	ENSG00000124733.5	ENST00000643776.1	1004	4	0	0	0	0	multi-exon	FALSE	canonical	3	998	junction_3	291.088760804444	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCGCTCCCTGCTTCCTT	-43013973	False	NA	-2	True	AATAAA	-28	NA	43013983	43012081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43012622_43012925_43013029_43013114_43013390_43013897
transcript_170910.known	chr6	+	1494	12	NNC	ENSG00000124702.19	novel	1869	11	NA	NA	6	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	393.111785670511	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGTGTTGTGTGTTTTTG	42992410	True	NA	20	True	ATTAAA	-7	NA	43014254	43021291	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_43014349_43017133_43017347_43017518_43017696_43017852_43017969_43018144_43018217_43018342_43018557_43018632_43018720_43018862_43018972_43019091_43019166_43019287_43019367_43020666_43020726_43021091
transcript_170917.known	chr6	+	1183	7	FSM	ENSG00000124541.7	ENST00000244496.6	1183	7	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_4	26.1454266236628	284	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATTCTGTTTTTTGTG	43006473	True	NA	26	True	CATAAA	-18	NA	43021622	43029599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43021785_43024984_43025133_43025262_43025330_43026036_43026142_43027177_43027253_43027359_43027478_43029091
transcript_170922.known	chr6	-	5549	26	FSM	ENSG00000044090.13	ENST00000674100.1	5549	26	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_24	22.6587201756851	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTGGAGCTTTTACAGA	-43053861	False	NA	NA	False	NA	NA	NA	43053943	43037661	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43038012_43038266_43038473_43038565_43038693_43038841_43038988_43040155_43040427_43040529_43040747_43040914_43041076_43042801_43042985_43043073_43043181_43043447_43043631_43044751_43044886_43045226_43045403_43045586_43045683_43045985_43046092_43046235_43046408_43046510_43046602_43046879_43047108_43048147_43048254_43048331_43048570_43049406_43049663_43049962_43050160_43050259_43050399_43050967_43051469_43051611_43051764_43052112_43052797_43053621
transcript_170923.known	chr6	-	5427	26	FSM	ENSG00000044090.13	ENST00000674134.1	5427	26	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_25	25.9237034391308	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAACCCAAGAGTTTGA	-43053808	False	5527	NA	False	NA	NA	NA	43053890	43037641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43038012_43038266_43038473_43038565_43038693_43038841_43038988_43040155_43040427_43040529_43040747_43040914_43041076_43042801_43042985_43043073_43043181_43043447_43043631_43044751_43044886_43045226_43045403_43045586_43045683_43045985_43046092_43046235_43046408_43046510_43046602_43046879_43047108_43048147_43048254_43048331_43048570_43049406_43049663_43049962_43050160_43050259_43050399_43050967_43051469_43051611_43051764_43052112_43052797_43053710
transcript_170924.known	chr6	-	5406	26	FSM	ENSG00000044090.13	ENST00000265348.9	5406	26	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_17	18.3596949865732	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACGTGTGTGTTTGGCGAC	-43053769	False	5527	NA	False	AATAAA	-20	NA	43053851	43037616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43038012_43038266_43038473_43038565_43038693_43038841_43038988_43040155_43040427_43040529_43040747_43040914_43041076_43042801_43042985_43043073_43043181_43043447_43043631_43044751_43044886_43045226_43045403_43045586_43045683_43045985_43046092_43046235_43046408_43046510_43046602_43046879_43047108_43048147_43048254_43048331_43048570_43049406_43049663_43049962_43050160_43050259_43050399_43050967_43051469_43051611_43051764_43052208_43052797_43053621
transcript_170930.known	chr6	+	2770	17	FSM	ENSG00000137171.15	ENST00000394056.6	2770	17	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	28.4164757447154	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTTCTGTGACTTGAGT	43059582	True	NA	10	True	AATAAA	-11	NA	43059894	43075087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43060277_43060517_43060606_43061310_43061594_43062916_43063148_43065619_43065702_43066305_43066526_43066995_43067084_43070353_43070456_43070691_43070866_43071274_43071375_43071566_43071620_43071851_43071923_43072146_43072256_43072823_43072965_43073222_43073339_43073901_43073966_43074621
transcript_170931.nnic	chr6	+	2757	17	NIC	ENSG00000137171.15	novel	2770	17	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	29.1241282058365	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGACTTGAGTCCTGAT	43059563	True	NA	16	True	AATAAA	-17	NA	43059875	43075093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_43060239_43060517_43060606_43061310_43061594_43062916_43063148_43065619_43065702_43066305_43066526_43066995_43067084_43070353_43070456_43070691_43070866_43071274_43071375_43071566_43071620_43071851_43071923_43072146_43072256_43072823_43072965_43073222_43073339_43073901_43073966_43074621
transcript_170933.nnic	chr6	+	2699	17	NIC	ENSG00000137171.15	novel	2770	17	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	29.1241282058365	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGACTTGAGTCCTGAT	43059565	True	NA	16	True	AATAAA	-17	NA	43059877	43075093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_43060183_43060517_43060606_43061310_43061594_43062916_43063148_43065619_43065702_43066305_43066526_43066995_43067084_43070353_43070456_43070691_43070866_43071274_43071375_43071566_43071620_43071851_43071923_43072146_43072256_43072823_43072965_43073222_43073339_43073901_43073966_43074621
transcript_170934.nnic	chr6	+	2664	17	NIC	ENSG00000137171.15	novel	2770	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	29.1241282058365	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGACTTGAGTCCTGAT	43059577	True	NA	16	True	AATAAA	-17	NA	43059889	43075093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_43060160_43060517_43060606_43061310_43061594_43062916_43063148_43065619_43065702_43066305_43066526_43066995_43067084_43070353_43070456_43070691_43070866_43071274_43071375_43071566_43071620_43071851_43071923_43072146_43072256_43072823_43072965_43073222_43073339_43073901_43073966_43074621
transcript_170941.nic	chr6	+	3235	16	NIC	ENSG00000137171.15	novel	2770	17	NA	NA	24	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	20.2776286143677	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGACTTGAGTCCTGAT	43058604	False	NA	16	True	AATAAA	-17	NA	43059676	43075093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_43060606_43061310_43061594_43062916_43063148_43065619_43065702_43066305_43066526_43066995_43067084_43070353_43070456_43070691_43070866_43071274_43071375_43071566_43071620_43071851_43071923_43072146_43072256_43072823_43072965_43073222_43073339_43073901_43073966_43074621
transcript_170942.known	chr6	+	2688	16	FSM	ENSG00000137171.15	ENST00000259708.7	2688	16	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	24.3273965360501	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGACTTGAGTCCTGAT	43058784	False	NA	16	True	AATAAA	-17	NA	43059856	43075093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43060239_43061310_43061594_43062916_43063148_43065619_43065702_43066305_43066526_43066995_43067084_43070353_43070456_43070691_43070866_43071274_43071375_43071566_43071620_43071851_43071923_43072146_43072256_43072823_43072965_43073222_43073339_43073901_43073966_43074621
transcript_170956.nic	chr6	-	2458	7	ISM	ENSG00000044090.13	ENST00000688302.1	5381	25	-51	11283	-4	-9	5prime_fragment	FALSE	canonical	3	65	junction_6	16.9476317585149	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGATGAAGCTACTTTGCT	-43053865	False	NA	-7	True	AATAAA	-20	NA	43053947	43049107	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_43049663_43049962_43050160_43050259_43050399_43050967_43051469_43051611_43051764_43052208_43052797_43053621
transcript_170959.known	chr6	-	1216	7	FSM	ENSG00000112651.12	ENST00000388752.8	1216	7	0	0	0	0	multi-exon	TRUE	canonical	1	202	junction_4	134.7772854255	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCAGTTCTGACTTTGG	-43053907	True	NA	-1	True	AATAAA	-15	NA	43059434	43054028	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43054487_43055544_43055619_43055896_43056008_43056080_43056197_43056306_43056446_43058064_43058234_43059285
transcript_17096.known	chr1	+	3336	17	FSM	ENSG00000117593.12	ENST00000649689.2	3336	17	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_12	34.6495287666369	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTTTTTTTTTTTAG	173819843	True	NA	25	True	ATTAAA	-41	NA	173824672	173858546	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_173825357_173826686_173826787_173828332_173828400_173830659_173830762_173831534_173831631_173833375_173833500_173834472_173834520_173836939_173837047_173838189_173838260_173839366_173839547_173840865_173840974_173845228_173845292_173850326_173850480_173853348_173853568_173853794_173853906_173856665_173856742_173857517
transcript_170962.known	chr6	-	2683	6	FSM	ENSG00000044090.13	ENST00000683160.1	2683	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	33.0187825335823	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATGTAAAGTTAGAAAATT	-43053817	False	NA	NA	False	AATGAA	-4	NA	43053899	43049230	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43050160_43050259_43050399_43050967_43051469_43051611_43051764_43052112_43052797_43053621
transcript_170966.known	chr6	-	899	6	FSM	ENSG00000112651.12	ENST00000230413.9	899	6	0	0	0	0	multi-exon	FALSE	canonical	1	34	junction_1	223.333472636772	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTACTGTGGTTTTGTT	-43053867	True	NA	NA	False	AATAAA	-23	NA	43059394	43054231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43054487_43055896_43056008_43056080_43056197_43056306_43056446_43058064_43058234_43059285
transcript_170971.known	chr6	-	570	3	FSM	ENSG00000112651.12	ENST00000489623.1	570	3	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	259	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTGTTACTGTGGTTTT	-43053907	True	NA	NA	False	AATAAA	-20	NA	43059434	43054234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43054487_43058064_43058234_43059285
transcript_170973.known	chr6	-	689	2	FSM	ENSG00000112651.12	ENST00000468957.1	689	2	0	0	0	0	multi-exon	FALSE	canonical	3	641	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCAGGCTGGCCAACATG	-43053911	True	NA	NA	False	NA	NA	NA	43059438	43057697	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43058234_43059285
transcript_170975.known	chr6	+	2361	16	FSM	ENSG00000137171.15	ENST00000347162.10	2361	16	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	16.0549057923116	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGACTTGAGTCCTGAT	43058558	True	NA	16	True	AATAAA	-17	NA	43059630	43075093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43059686_43061310_43061594_43062916_43063148_43065619_43065702_43066305_43066526_43066995_43067084_43070353_43070456_43070691_43070866_43071274_43071375_43071566_43071620_43071851_43071923_43072146_43072256_43072823_43072965_43073222_43073339_43073901_43073966_43074621
transcript_170976.known	chr6	+	2602	16	FSM	ENSG00000137171.15	ENST00000479388.5	2602	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	25.4785312676291	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCTGTGACTTGAGTCC	43059570	True	NA	12	True	AATAAA	-13	NA	43059882	43075089	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43060183_43061310_43061594_43062916_43063148_43065619_43065702_43066305_43066526_43066995_43067084_43070353_43070456_43070691_43070866_43071274_43071375_43071566_43071620_43071851_43071923_43072146_43072256_43072823_43072965_43073222_43073339_43073901_43073966_43074621
transcript_170981.known	chr6	+	4222	20	FSM	ENSG00000112655.16	ENST00000230419.9	4222	20	0	0	0	0	multi-exon	TRUE	canonical	3	717	junction_5	65.6050467621571	1265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTTCTGAGATTCATTC	43066564	True	NA	14	True	AATAAA	-17	NA	43076313	43161715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43076568_43128976_43129265_43129726_43129830_43130229_43130421_43130510_43130662_43132015_43132165_43132420_43132688_43138848_43138983_43139135_43139272_43139405_43139526_43141667_43141818_43141930_43142082_43142171_43142300_43143416_43143621_43144450_43144607_43145199_43145433_43146617_43146699_43158816_43158969_43159787_43159967_43160720
transcript_170991.known	chr6	+	3436	20	FSM	ENSG00000112655.16	ENST00000481273.5	3436	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	197.572764393063	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGAGCAGGGCCTGGCC	43076769	False	NA	NA	False	NA	NA	NA	43076813	43161010	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43076987_43128976_43129265_43129726_43129830_43130229_43130421_43130510_43130662_43132015_43132165_43132420_43132688_43138848_43138983_43139135_43139272_43139405_43139526_43141667_43141818_43141930_43142082_43142171_43142300_43143416_43143621_43144450_43144607_43145199_43145433_43146617_43146699_43158816_43158969_43159787_43159967_43160720
transcript_170992.known	chr6	+	4023	19	FSM	ENSG00000112655.16	ENST00000352931.6	4023	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	202.967430337426	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTGTTTCTGAGATTCA	43066592	True	NA	11	True	AATAAA	-14	NA	43076341	43161712	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43076568_43128976_43129265_43129726_43129830_43130229_43130421_43130510_43130662_43132015_43132165_43132420_43132688_43138848_43138983_43139135_43139272_43139405_43139526_43141667_43141818_43141930_43142042_43143416_43143621_43144450_43144607_43145199_43145433_43146617_43146699_43158816_43158969_43159787_43159967_43160720
transcript_170998.known	chr6	+	5282	19	FSM	ENSG00000112655.16	ENST00000487673.5	5282	19	0	0	0	0	multi-exon	FALSE	canonical	3	717	junction_5	66.9933661724138	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGTTTCTGAGATTCAT	43066619	False	NA	12	True	AATAAA	-15	NA	43076368	43161713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43076568_43128976_43129265_43129726_43129830_43130229_43130421_43130510_43130662_43132015_43132165_43132420_43132688_43138848_43138983_43139135_43139272_43139405_43139526_43141667_43141818_43141930_43142082_43142171_43143621_43144450_43144607_43145199_43145433_43146617_43146699_43158816_43158969_43159787_43159967_43160720
transcript_1710.known	chr1	-	2564	6	FSM	ENSG00000227372.12	ENST00000650037.1	2564	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	75.1041942903324	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTCTCACGCTATACT	-3740927	False	NA	25	True	NA	NA	NA	3746725	3737211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3738514_3740232_3740388_3742803_3742912_3743060_3743191_3745606_3746187_3746436
transcript_171000.known	chr6	+	4071	19	FSM	ENSG00000112655.16	ENST00000345201.6	4071	19	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_9	191.471204681598	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTGTTTCTGAGATTCA	43066592	True	NA	11	True	AATAAA	-14	NA	43076341	43161712	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43076568_43128976_43129265_43129726_43129830_43130229_43130421_43130510_43130662_43132015_43132165_43132420_43132688_43138848_43138983_43139135_43139272_43141667_43141818_43141930_43142082_43142171_43142300_43143416_43143621_43144450_43144607_43145199_43145433_43146617_43146699_43158816_43158969_43159787_43159967_43160720
transcript_171017.known	chr6	+	3801	17	FSM	ENSG00000112655.16	ENST00000349241.6	3801	17	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	207.771659520734	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTGTTTCTGAGATTCA	43066592	True	NA	11	True	AATAAA	-14	NA	43076341	43161712	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43076568_43128976_43129265_43129726_43129830_43130229_43130421_43130510_43130662_43132015_43132165_43132420_43132688_43141667_43141818_43141930_43142082_43142171_43142300_43143416_43143621_43144450_43144607_43145199_43145433_43146617_43146699_43158816_43158969_43159787_43159967_43160720
transcript_171036.known	chr6	+	2412	7	FSM	ENSG00000112655.16	ENST00000471863.5	2412	7	0	0	0	0	multi-exon	FALSE	canonical	3	717	junction_5	50.6932496054017	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACATACAAACTATTTTG	43066589	True	NA	NA	False	AATAAA	-27	NA	43076338	43133721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43076568_43128976_43129265_43129726_43129830_43130229_43130421_43130510_43130662_43132015_43132165_43132420
transcript_171038.known	chr6	+	902	2	FSM	ENSG00000112655.16	ENST00000476760.1	902	2	0	0	0	0	multi-exon	FALSE	canonical	3	809	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCACAGAGCCTCGAGGT	43066557	True	NA	NA	False	NA	NA	NA	43076306	43129617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43076568_43128976
transcript_171040.known	chr6	+	4231	7	FSM	ENSG00000112658.8	ENST00000265354.6	4231	7	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	8.99536917900909	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGGGTCTTTGGTTCTG	43170963	True	NA	40	True	AATAAA	-22	NA	43171268	43181506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43172170_43173846_43174114_43175705_43175968_43176547_43176668_43178293_43178486_43178805_43178883_43179094
transcript_171044.known	chr6	+	2572	5	FSM	ENSG00000112659.14	ENST00000451399.5	2572	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	8.49632273398321	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAGCGTTGGTAATATTA	43181690	True	NA	NA	False	ATTAAA	-16	NA	43182183	43188958	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43182250_43184301_43184906_43185455_43185611_43185954_43186456_43187712
transcript_171045.known	chr6	+	7684	41	FSM	ENSG00000112659.14	ENST00000372647.6	7684	41	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_28	6.46142399166004	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTCTGGGAGCAGGCTGA	43181691	True	NA	12	True	AATAAA	-18	NA	43182184	43224585	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43182250_43184301_43184906_43185455_43185611_43185954_43186456_43186959_43187096_43187245_43187440_43187712_43188119_43188522_43188716_43193000_43193209_43196068_43196266_43196644_43196863_43198608_43198856_43199265_43199372_43199928_43200157_43200435_43200527_43200662_43200835_43202715_43202822_43203108_43203205_43203416_43203593_43203853_43203988_43204359_43204540_43204747_43204858_43204932_43205116_43205262_43205424_43206006_43206236_43206320_43206511_43213148_43213295_43213437_43213568_43213796_43213913_43215078_43215327_43216157_43216504_43220458_43220600_43220746_43220912_43221157_43221322_43221684_43221779_43222315_43222391_43222530_43222642_43222778_43222897_43223263_43223398_43224094_43224169_43224249
transcript_171047.known	chr6	-	654	4	FSM	ENSG00000112667.13	ENST00000230431.11	654	4	0	0	0	0	multi-exon	FALSE	canonical	3	1082	junction_1	18.4028983224563	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTGTCTTGTGTGAGTC	-43219013	True	NA	-5	True	ATTAAA	-21	NA	43229481	43225628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43225882_43226032_43226144_43226326_43226396_43229260
transcript_171050.known	chr6	-	796	3	FSM	ENSG00000112667.13	ENST00000393987.2	796	3	0	0	0	0	multi-exon	FALSE	canonical	3	1120	junction_2	1	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTAACTTTCTGTCTTGTG	-43219010	True	NA	-11	True	ATTAAA	-15	NA	43229478	43225634	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43226144_43226326_43226396_43229260
transcript_171053.known	chr6	-	8210	10	FSM	ENSG00000171467.16	ENST00000361428.3	8210	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	14.7723465374402	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCCTTCTGGATTTTTG	-43369457	True	NA	-6	True	AATAAA	-14	NA	43369647	43336069	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43340503_43340789_43340909_43342111_43342212_43342675_43342880_43348323_43348626_43352376_43352477_43354663_43356146_43357125_43357766_43365291_43365441_43368966
transcript_171058.nnic	chr6	-	1114	8	NNC	ENSG00000146215.14	novel	991	8	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	76.1949701055638	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCAACTCTTCTTTGG	-43305393	False	NA	-14	True	AATAAA	-14	NA	43308878	43305471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_43305876_43305995_43306125_43306218_43306314_43306445_43306518_43307611_43307744_43307838_43307897_43308314_43308410_43308749
transcript_171059.known	chr6	-	991	8	FSM	ENSG00000146215.14	ENST00000372569.8	991	8	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_4	50.7004005136537	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCAACTCTTCTTTGG	-43305341	True	NA	-14	True	AATAAA	-14	NA	43308826	43305471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43305876_43306066_43306125_43306218_43306314_43306445_43306518_43307611_43307744_43307838_43307897_43308314_43308410_43308749
transcript_171065.nnic	chr6	-	1438	7	NNC	ENSG00000146215.14	novel	991	8	NA	NA	-36	0	intron_retention	FALSE	canonical	3	42	junction_1	81.934424999508	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCAACTCTTCTTTGG	-43305377	True	NA	-14	True	AATAAA	-14	NA	43308862	43305471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_43305876_43305995_43306125_43306218_43306314_43306445_43306518_43307611_43307744_43307838_43307897_43308314
transcript_171066.nnic	chr6	-	982	7	NNC	ENSG00000146215.14	novel	991	8	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	87.0995598917316	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCAACTCTTCTTTGG	-43305393	False	NA	-14	True	AATAAA	-14	NA	43308878	43305471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_43305876_43305995_43306125_43306218_43306314_43306445_43306518_43307838_43307897_43308314_43308410_43308749
transcript_171069.nic	chr6	-	1367	7	ISM	ENSG00000146215.14	ENST00000372569.8	991	8	-36	0	-36	0	intron_retention	FALSE	canonical	3	117	junction_4	54.6859722008812	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCAACTCTTCTTTGG	-43305377	True	NA	-14	True	AATAAA	-14	NA	43308862	43305471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_43305876_43306066_43306125_43306218_43306314_43306445_43306518_43307611_43307744_43307838_43307897_43308314
transcript_17107.known	chr1	+	3057	16	FSM	ENSG00000117593.12	ENST00000648807.1	3057	16	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_12	83.4472820940796	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAGTACTTTGAAAAAC	173819823	True	NA	-8	True	GATAAA	-5	NA	173824652	173858400	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_173825357_173826686_173826787_173828332_173828400_173830659_173830762_173831534_173831631_173833375_173833500_173834472_173834520_173836939_173837047_173838189_173838260_173839366_173839547_173840865_173840974_173845228_173845292_173853348_173853568_173853794_173853906_173856665_173856742_173857517
transcript_171070.nnic	chr6	-	911	7	NIC	ENSG00000146215.14	novel	991	8	NA	NA	-52	0	combination_of_known_splicesites	FALSE	canonical	3	83	junction_4	61.4747012102449	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCAACTCTTCTTTGG	-43305393	False	NA	-14	True	AATAAA	-14	NA	43308878	43305471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_43305876_43306066_43306125_43306218_43306314_43306445_43306518_43307838_43307897_43308314_43308410_43308749
transcript_171073.nic	chr6	-	944	7	NIC	ENSG00000146215.14	novel	991	8	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	77.2084120344985	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCAGCCTCTGTGGCTTCT	-43305393	False	NA	-4	True	CATAAA	-17	NA	43308878	43305512	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_43305876_43306218_43306314_43306445_43306518_43307611_43307744_43307838_43307897_43308314_43308410_43308749
transcript_171076.nnic	chr6	-	798	6	NIC	ENSG00000146215.14	novel	991	8	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_4	88.5650043753175	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCAACTCTTCTTTGG	-43305338	True	NA	-14	True	AATAAA	-14	NA	43308823	43305471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_43305876_43306066_43306125_43306218_43306314_43306445_43306518_43308314_43308410_43308749
transcript_171080.nnic	chr6	-	812	6	NIC	ENSG00000146215.14	novel	991	8	NA	NA	-52	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	89.2201770901627	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCAGCCTCTGTGGCTTCT	-43305393	False	NA	-4	True	CATAAA	-17	NA	43308878	43305512	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_43305876_43306218_43306314_43306445_43306518_43307838_43307897_43308314_43308410_43308749
transcript_17109.known	chr1	+	3209	16	FSM	ENSG00000117593.12	ENST00000647645.1	3209	16	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_11	86.0330685776631	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATAGTAAAAGTCATTTT	173819878	True	NA	-4	True	ATTAAA	-12	NA	173824707	173858517	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_173825357_173826686_173826787_173828332_173828400_173830659_173830762_173831534_173831631_173833375_173833500_173834472_173834520_173836939_173837047_173838189_173838260_173839366_173839547_173840865_173840974_173850326_173850480_173853348_173853568_173853794_173853906_173856665_173856742_173857517
transcript_171090.nic	chr6	-	3346	4	ISM	ENSG00000171467.16	ENST00000361428.3	8210	10	91	18109	-78	-18109	5prime_fragment	FALSE	canonical	3	38	junction_1	15.9234278833282	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAGAGTCCAGGAGTAAC	-43369523	False	NA	-23	True	AATAAA	-20	NA	43369556	43354178	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_43356146_43357125_43357766_43365291_43365441_43368966
transcript_171092.known	chr6	-	773	3	FSM	ENSG00000146215.14	ENST00000485819.1	773	3	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	48	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACTTCATTCTTGGCAAA	-43305303	True	NA	NA	False	NA	NA	NA	43308788	43307502	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43307744_43307838_43307897_43308314
transcript_171096.nic	chr6	-	1311	2	ISM	ENSG00000171467.16	ENST00000607252.5	1185	4	22994	0	22994	0	3prime_fragment	FALSE	canonical	3	252	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGTTAATTGGGCAGATG	-43305377	True	NA	NA	False	NA	NA	NA	43308862	43307133	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_43307897_43308314
transcript_171102.known	chr6	+	5043	22	FSM	ENSG00000124574.15	ENST00000372530.9	5043	22	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	17.5135839730983	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGAGGTCTCCTCTGTGT	43427082	True	NA	18	True	ATTAAA	-22	NA	43427540	43450427	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43427758_43427967_43428140_43432141_43433361_43434620_43434849_43435750_43435908_43436137_43436248_43437933_43438014_43438623_43438796_43441861_43441961_43442969_43443160_43443932_43444011_43444158_43444354_43444787_43444939_43445124_43445315_43445598_43445943_43446276_43446447_43447247_43447409_43447683_43447938_43448880_43449027_43449106_43449205_43449421_43449535_43449928
transcript_171105.nic	chr6	+	4930	21	ISM	ENSG00000124574.15	ENST00000372530.9	5043	22	318	5	3	0	3prime_fragment	FALSE	canonical	3	31	junction_1	13.3225372958757	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGGCTGAGGTCTCCTC	43427400	False	NA	13	True	ATTAAA	-17	NA	43427858	43450422	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_43428140_43432141_43433361_43434620_43434849_43435750_43435908_43436137_43436248_43437933_43438014_43438623_43438796_43441861_43441961_43442969_43443160_43443932_43444011_43444158_43444354_43444787_43444939_43445124_43445315_43445598_43445943_43446276_43446447_43447247_43447409_43447683_43447938_43448880_43449027_43449106_43449205_43449421_43449535_43449928
transcript_171107.nnic	chr6	+	4767	21	NIC	ENSG00000124574.15	novel	5088	20	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	15.0315501529283	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGGCTGAGGTCTCCTC	43427391	False	NA	13	True	ATTAAA	-17	NA	43427849	43450422	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_43427968_43432141_43433361_43434620_43434849_43435750_43435908_43436137_43436248_43437933_43438014_43438623_43438796_43441861_43441961_43442969_43443160_43443932_43444011_43444158_43444354_43444787_43444939_43445124_43445315_43445598_43445943_43446276_43446447_43447247_43447409_43447683_43447938_43448880_43449027_43449106_43449205_43449421_43449535_43449928
transcript_171120.known	chr6	-	1548	6	FSM	ENSG00000171462.15	ENST00000372488.8	1548	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	1.26491106406735	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGCTCCTATGCCAGAAA	-43455530	True	NA	-25	True	AATAAA	-16	NA	43455548	43450351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43451275_43451939_43452085_43453004_43453136_43454410_43454475_43454749_43454881_43455394
transcript_171135.nic	chr6	+	2789	11	NIC	ENSG00000137221.14	novel	2778	11	NA	NA	-11	0	intron_retention	FALSE	canonical	2	9	junction_2	52.0850266391407	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCCTAACTTGTCTTAAT	NA	False	NA	14	True	AATAAA	-15	NA	43477511	43506553	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_43477629_43478086_43478233_43478658_43478719_43497880_43497978_43498974_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43503400_43503509_43503622_43503707_43504760
transcript_171138.known	chr6	+	2778	11	FSM	ENSG00000137221.14	ENST00000372444.6	2778	11	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	51.1457720637787	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAACTTGTCTTAATGAC	43474705	True	NA	17	True	AATAAA	-18	NA	43477522	43506556	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43477629_43478086_43478233_43478658_43478719_43497880_43497978_43498977_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43503400_43503509_43503622_43503707_43504760
transcript_171143.known	chr6	+	2751	11	FSM	ENSG00000137221.14	ENST00000372445.9	2751	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	53.4846707010523	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAACTTGTCTTAATGAC	43474705	True	NA	17	True	AATAAA	-18	NA	43477522	43506556	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43477629_43478086_43478233_43497880_43497978_43498974_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43502587_43502618_43503400_43503509_43503622_43503707_43504760
transcript_171146.known	chr6	+	2695	11	FSM	ENSG00000137221.14	ENST00000372449.5	2695	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	52.5947716032687	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCCTAACTTGTCTTAAT	43474755	True	NA	14	True	AATAAA	-15	NA	43477572	43506553	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43477629_43478086_43478233_43497880_43497978_43498977_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43502587_43502618_43503400_43503509_43503622_43503707_43504760
transcript_171151.known	chr6	+	2720	10	FSM	ENSG00000137221.14	ENST00000259751.5	2720	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	42.7094692712529	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCCTAACTTGTCTTAAT	43474755	True	NA	14	True	AATAAA	-15	NA	43477572	43506553	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43477629_43478086_43478233_43497880_43497978_43498922_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43503400_43503509_43503622_43503707_43504760
transcript_171156.nic	chr6	+	2672	10	NIC	ENSG00000137221.14	novel	2720	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	64	junction_3	26.9242192133201	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCCTAACTTGTCTTAAT	43474751	True	NA	14	True	AATAAA	-15	NA	43477568	43506553	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_43477629_43478086_43478233_43497880_43497978_43498974_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43503400_43503509_43503622_43503707_43504760
transcript_171159.known	chr6	+	2665	10	FSM	ENSG00000137221.14	ENST00000372452.5	2665	10	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_3	23.0592366539252	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCCTAACTTGTCTTAAT	43474755	True	NA	14	True	AATAAA	-15	NA	43477572	43506553	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43477629_43478086_43478233_43497880_43497978_43498977_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43503400_43503509_43503622_43503707_43504760
transcript_17116.known	chr1	+	3133	16	FSM	ENSG00000117593.12	ENST00000647730.1	3133	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	85.8814687034791	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAGTACTTTGAAAAAC	173819833	True	NA	-8	True	GATAAA	-5	NA	173824662	173858400	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_173825357_173826686_173826787_173830659_173830762_173831534_173831631_173833375_173833500_173834472_173834520_173836939_173837047_173838189_173838260_173839366_173839547_173840865_173840974_173845228_173845292_173850326_173850480_173853348_173853568_173853794_173853906_173856665_173856742_173857517
transcript_171161.nic	chr6	+	2708	10	NIC	ENSG00000137221.14	novel	2665	10	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_4	45.1157633069134	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCCTAACTTGTCTTAAT	43474748	True	NA	14	True	AATAAA	-15	NA	43477565	43506553	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_43477629_43478086_43478233_43497880_43497978_43498977_43499137_43500743_43500773_43501525_43501688_43502282_43502350_43503400_43503509_43503622_43503707_43504760
transcript_171168.known	chr6	+	2572	9	FSM	ENSG00000137221.14	ENST00000436109.6	2572	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	45.9728180558904	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAACTTGTCTTAATGAC	43474705	True	NA	17	True	AATAAA	-18	NA	43477522	43506556	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43477629_43497880_43497978_43498977_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43503400_43503509_43503622_43503707_43504760
transcript_171178.known	chr6	-	5323	32	FSM	ENSG00000124571.18	ENST00000265351.12	5323	32	0	0	0	0	multi-exon	FALSE	canonical	2	340	junction_9	49.2948190821862	163	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACCCATCTGCCTTTTTC	-43565697	True	NA	-3	True	AGTAAA	-22	NA	43576038	43522333	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43524006_43524470_43524636_43524830_43524969_43525106_43525215_43525838_43525922_43526684_43526748_43527633_43527732_43528158_43528206_43528827_43528926_43530687_43530825_43531478_43531576_43533906_43534008_43546570_43546753_43547607_43547708_43548260_43548461_43549488_43549579_43549892_43549935_43551297_43551454_43553372_43553504_43555835_43555965_43558500_43558592_43560177_43560304_43560923_43561008_43562246_43562347_43565659_43565737_43567168_43567355_43568710_43568738_43570501_43570685_43570856_43570995_43572505_43572579_43573479_43573602_43575759
transcript_17118.known	chr1	+	1793	14	FSM	ENSG00000117593.12	ENST00000648458.1	1793	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_13	88.2283213395253	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACATGCTGGTGTTTCAT	173824944	False	NA	NA	False	ATTAAA	-19	NA	173824959	173852014	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_173825357_173826686_173826787_173828332_173828400_173830659_173830762_173831534_173831631_173833375_173833500_173834472_173834520_173836939_173837047_173838189_173838260_173839366_173839547_173840865_173840974_173845228_173845292_173850326_173850480_173851835
transcript_17120.known	chr1	-	632	12	FSM	ENSG00000234741.9	ENST00000687189.1	731	12	8	91	0	0	multi-exon	FALSE	canonical	3	1906	junction_11	643.43628117622	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	-173805431	True	NA	-37	True	AATAAA	-14	NA	173867987	173863900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865228_173865283_173865470_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
transcript_171219.known	chr6	+	1275	9	FSM	ENSG00000171453.20	ENST00000642195.1	1275	9	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_4	17.1823856027037	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTGAGACTACTTTTGA	43510712	True	NA	NA	False	AATAAA	-19	NA	43517088	43521513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43517179_43517305_43517378_43519332_43519441_43519705_43519839_43520065_43520186_43520274_43520428_43520624_43520775_43520931_43521049_43521181
transcript_17122.known	chr1	-	1007	12	FSM	ENSG00000234741.9	ENST00000451607.5	1007	12	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_11	1105.66849006262	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTACAGCCTCAAACTTC	-173867718	False	NA	95	True	NA	NA	NA	173867729	173864033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865228_173865283_173865509_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867154
transcript_171220.known	chr6	+	1280	9	FSM	ENSG00000171453.20	ENST00000304004.7	1280	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	103.297431599242	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAACTATTAATAAGGGTC	43510712	True	NA	NA	False	AAAAAG	-17	NA	43517088	43529585	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43517179_43517305_43517378_43519332_43519441_43519705_43519839_43520065_43520186_43520274_43520428_43520624_43520775_43520931_43521049_43529248
transcript_171222.known	chr6	+	1334	9	FSM	ENSG00000171453.20	ENST00000645141.1	1334	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	101.759520439122	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTGAGACTACTTTTGA	43510720	True	NA	NA	False	AATAAA	-19	NA	43517096	43521513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43517179_43517305_43517378_43519332_43519441_43519705_43519906_43520065_43520186_43520274_43520428_43520624_43520775_43520931_43521049_43521181
transcript_171225.nic	chr6	-	1468	9	NIC	ENSG00000137207.12	novel	1507	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_4	156.418459188805	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGCGGCTGATCCAGTG	-43516973	True	NA	-33	True	ATTAAA	-21	NA	43516989	43511831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_43512316_43512439_43512564_43512760_43512875_43513068_43513099_43513358_43513452_43513587_43513634_43515594_43515702_43515888_43516096_43516726
transcript_171227.known	chr6	-	1444	9	FSM	ENSG00000137207.12	ENST00000506469.5	1444	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	160.450488858713	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCTCCCCACCTACCCCT	-43507055	True	NA	-129	True	NA	NA	NA	43516941	43511927	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43512316_43512439_43512564_43512760_43512875_43513068_43513201_43513358_43513452_43513587_43513634_43515594_43515702_43515888_43516114_43516726
transcript_171228.known	chr6	-	1639	9	FSM	ENSG00000137207.12	ENST00000510102.5	1639	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	201.069639677401	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGAACTGCAGCGGCTG	-43516969	True	NA	-41	True	ATTAAA	-13	NA	43516985	43511839	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43512316_43512439_43512564_43512760_43512875_43513068_43513201_43513358_43513452_43513587_43513634_43515605_43515702_43515888_43516188_43516726
transcript_171229.known	chr6	-	1321	9	FSM	ENSG00000137207.12	ENST00000490447.6	1321	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	159.131971567627	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTCTTGGCCAGTCCTC	-43516956	False	NA	-72	True	NA	NA	NA	43516972	43512158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43512316_43512439_43512564_43512760_43512875_43513068_43513201_43513358_43513452_43513587_43513634_43515594_43515702_43515888_43516191_43516726
transcript_17123.nic	chr1	-	609	12	FSM	ENSG00000234741.9	ENST00000689238.1	607	12	-8	6	-8	0	multi-exon	FALSE	canonical	3	1906	junction_11	662.536772720286	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	-173867992	False	NA	-37	True	AATAAA	-14	NA	173868003	173863900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865228_173865283_173865509_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
transcript_171233.known	chr6	+	1119	8	FSM	ENSG00000171453.20	ENST00000372344.6	1119	8	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_6	108.440898979253	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAACTTTTTGAGACTA	43510711	True	NA	NA	False	AATAAA	-12	NA	43517087	43521506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43517179_43517305_43517378_43519332_43519441_43519705_43519839_43520065_43520186_43520274_43520428_43520931_43521049_43521181
transcript_171245.known	chr6	-	2121	6	FSM	ENSG00000204052.4	ENST00000372441.1	2121	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.72046505340853	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACCTGTCGTGTGGCTGT	-43510670	False	NA	-8	True	NA	NA	NA	43510686	43506968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43507309_43507455_43507679_43507825_43507927_43508297_43508421_43508759_43508921_43509513
transcript_171250.known	chr6	-	3031	12	FSM	ENSG00000172432.19	ENST00000307126.10	3031	12	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_7	13.3824851612437	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTGTGCTTATGCGTTA	-43626286	True	NA	NA	False	AATAAA	-15	NA	43629264	43620493	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43621791_43622002_43622168_43622632_43622805_43623736_43623796_43623932_43624069_43624509_43624730_43624887_43625063_43625362_43625561_43625755_43625865_43626225_43626411_43626921_43626949_43628976
transcript_171251.known	chr6	+	8368	11	FSM	ENSG00000170734.12	ENST00000372236.9	8368	11	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	4.7549973711875	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATGTGTATTTAAATATA	43574298	True	NA	NA	False	AATAAA	-22	NA	43576184	43620523	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43576441_43582315_43582457_43583006_43583142_43587271_43587490_43597695_43597866_43600987_43601092_43603891_43604012_43604614_43604739_43605253_43605320_43610553_43610724_43613659
transcript_171260.nic	chr6	-	3362	11	NIC	ENSG00000172432.19	novel	3031	12	NA	NA	-31	0	intron_retention	FALSE	canonical	3	43	junction_10	11.7817655722731	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTGTGCTTATGCGTTA	-43629234	False	NA	NA	False	AATAAA	-15	NA	43629295	43620493	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_43621791_43622002_43622168_43622632_43622805_43623736_43623796_43623932_43624069_43624509_43624730_43624887_43625561_43625755_43625865_43626225_43626411_43626921_43626949_43628976
transcript_171274.nnic	chr6	+	1068	4	NNC	ENSG00000170734.12	novel	8368	11	NA	NA	-48	-2392	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	10.2740233382816	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGCTAGACATGGTGTTG	43574250	True	NA	NA	False	ATTAAA	-22	NA	43576136	43585008	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_43576441_43582315_43582457_43583006_43583142_43584520
transcript_171278.known	chr6	+	1517	4	FSM	ENSG00000124688.14	ENST00000451025.6	1517	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	146.84761565045	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAATAGATTCTTATTA	43629385	True	NA	-12	True	AATATA	-1	NA	43629539	43640919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43629770_43633193_43633316_43636380_43636647_43640020
transcript_171279.known	chr6	+	1269	3	FSM	ENSG00000124688.14	ENST00000372171.5	1269	3	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_2	10	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCTGAAATTGTTTTGA	43631811	True	NA	10	True	AATAAA	-16	NA	43635839	43640941	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43635922_43636380_43636647_43640020
transcript_171281.known	chr6	-	1163	6	FSM	ENSG00000096080.12	ENST00000372133.8	1163	6	0	0	0	0	multi-exon	FALSE	canonical	3	659	junction_2	48.3793344311391	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCCCTGGTTGTCACCTT	-43681136	True	NA	NA	False	AAGAAA	-15	NA	43687791	43671201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43671907_43675201_43675272_43675493_43675618_43678517_43678626_43681088_43681121_43687667
transcript_171285.known	chr6	+	2545	5	FSM	ENSG00000172426.16	ENST00000372163.5	2545	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	1.92028643696715	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGCCCATCCTTCATTC	43644987	True	NA	NA	False	AATAAA	-17	NA	43645035	43672600	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43645326_43650374_43650541_43655561_43655692_43656576_43656724_43670788
transcript_171288.known	chr6	-	803	5	FSM	ENSG00000096080.12	ENST00000427312.1	803	5	0	0	0	0	multi-exon	FALSE	canonical	3	681	junction_1	42.0773097999385	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGGAAGCTGTATCACT	-43681136	True	NA	NA	False	NA	NA	NA	43687791	43671783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43671907_43675201_43675618_43678517_43678626_43681088_43681121_43687667
transcript_171289.known	chr6	-	785	5	FSM	ENSG00000096080.12	ENST00000372116.5	785	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	316.065954351303	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGGGACAGGAGTTTTG	-43681136	True	NA	-60	True	GGGGCT	-15	NA	43687791	43671509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_43671907_43675493_43675618_43678517_43678626_43681088_43681121_43687667
transcript_171296.known	chr6	+	1683	4	FSM	ENSG00000112715.26	ENST00000476772.5	1683	4	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_1	5.43650214343336	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGTGTTGCTCCATAATA	43763779	True	NA	NA	False	ATTAAA	-24	NA	43770183	43778764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_43771313_43774340_43774393_43777468_43777666_43778459
transcript_171298.known	chr6	+	5250	4	FSM	ENSG00000181577.16	ENST00000336600.6	5250	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	2.94392028877595	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTTTCTGGAGCACCTA	44000393	True	NA	3	True	ATTAAA	-18	NA	44000584	44007612	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_44000701_44001016_44001144_44002052_44002128_44002680
transcript_1713.known	chr1	-	2363	6	FSM	ENSG00000227372.12	ENST00000649468.1	2363	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	76.1745364278641	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAAACCTTCCTTCGAAG	-3741173	False	NA	-101	True	NA	NA	NA	3746971	3737337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3737855_3740232_3740388_3742429_3742518_3742803_3742912_3743060_3743191_3745606
transcript_171301.known	chr6	+	2757	4	FSM	ENSG00000181577.16	ENST00000439969.2	2757	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	4.92160768674447	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCACGCTTTGATGAAT	44000425	True	NA	-34	True	NA	NA	NA	44000616	44005108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_44000701_44000973_44001144_44002052_44002128_44002680
transcript_171305.known	chr6	+	3284	24	FSM	ENSG00000137216.19	ENST00000323267.11	3284	24	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	57.5368378750988	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGTGTCTGACTTGTGC	44124546	True	NA	14	True	AATAAA	-19	NA	44127553	44155519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_44127679_44134560_44134744_44135016_44135097_44135327_44135367_44136348_44136440_44138479_44138518_44139466_44139610_44139707_44139760_44140251_44140361_44141027_44141099_44146846_44146928_44147376_44147501_44148251_44148386_44148512_44148651_44148791_44148946_44149858_44149966_44150223_44150311_44150563_44150630_44151845_44152009_44152592_44152699_44153675_44153844_44154072_44154189_44154364_44154446_44154691
transcript_171317.nic	chr6	+	3258	23	NIC	ENSG00000137216.19	novel	3284	24	NA	NA	-13	0	combination_of_known_junctions	TRUE	canonical	3	72	junction_1	32.2869686887363	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGTGTCTGACTTGTGC	44124533	True	NA	14	True	AATAAA	-19	NA	44127540	44155519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_44127679_44134560_44134744_44135016_44135097_44136348_44136440_44138479_44138518_44139466_44139610_44139707_44139760_44140251_44140361_44141027_44141099_44146846_44146928_44147376_44147501_44148251_44148386_44148512_44148651_44148791_44148946_44149858_44149966_44150223_44150311_44150563_44150630_44151845_44152009_44152592_44152699_44153675_44153844_44154072_44154189_44154364_44154446_44154691
transcript_17132.known	chr1	-	822	11	FSM	ENSG00000234741.9	ENST00000436656.6	825	11	2	1	0	0	multi-exon	FALSE	canonical	3	1906	junction_10	548.456279023223	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	-173805433	True	NA	-37	True	AATAAA	-14	NA	173867989	173863900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865228_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
transcript_171322.nic	chr6	+	3348	23	NIC	ENSG00000137216.19	novel	3284	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	97	junction_1	28.6587214308243	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGTGTCTGACTTGTGC	44124631	True	NA	14	True	AATAAA	-19	NA	44127638	44155519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_44127867_44134560_44134744_44135016_44135097_44136348_44136440_44138479_44138518_44139466_44139610_44139707_44139760_44140251_44140361_44141027_44141099_44146846_44146928_44147376_44147501_44148251_44148386_44148512_44148651_44148791_44148946_44149858_44149966_44150223_44150311_44150563_44150630_44151845_44152009_44152592_44152699_44153675_44153844_44154072_44154189_44154364_44154446_44154691
transcript_17133.known	chr1	-	542	11	FSM	ENSG00000234741.9	ENST00000449289.6	543	11	0	1	0	0	multi-exon	FALSE	canonical	3	90	junction_4	1146.79008105233	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTGTGTAGTGTTTAC	-173805433	True	NA	-36	True	AATAAA	-15	NA	173867989	173863899	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865509_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
transcript_171340.known	chr6	-	957	3	FSM	ENSG00000180992.7	ENST00000372014.5	957	3	0	0	0	0	multi-exon	FALSE	canonical	3	1321	junction_2	142.5	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTTGTTTTTATTTTTC	-44114173	True	NA	-26	True	TATAAA	-23	NA	44127452	44113450	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_44114210_44116540_44116630_44127343
transcript_171344.nnic	chr6	-	722	3	NNC	ENSG00000180992.7	novel	957	3	NA	NA	-47	-243	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_2	771.5	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTTCCAGAGCTTTC	-44127486	False	NA	-13	True	AATAAA	-13	NA	44127499	44113693	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_44114210_44116540_44116630_44127382
transcript_171346.nnic	chr6	-	638	2	NIC	ENSG00000180992.7	novel	957	3	NA	NA	-13	-243	combination_of_known_splicesites	FALSE	canonical	3	84	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTTCCAGAGCTTTC	-44114186	True	NA	-13	True	AATAAA	-13	NA	44127465	44113693	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_44114210_44127343
transcript_171350.known	chr6	+	2718	23	FSM	ENSG00000137225.13	ENST00000398776.2	2718	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.30099034587762	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCATGTCTCTGTGTTTTT	44158808	False	NA	7	True	AATAAA	-18	NA	44158819	44184401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_44158865_44166757_44166830_44169280_44169532_44169905_44169976_44172301_44172421_44172939_44173074_44173217_44173387_44176067_44176152_44176252_44176339_44176580_44176656_44176837_44176999_44177241_44177421_44179618_44179631_44179951_44180164_44180459_44180500_44180596_44180663_44180747_44180806_44180932_44180998_44181251_44181321_44182940_44183020_44183118_44183236_44183704_44183764_44183905
transcript_171354.nic	chr6	+	3302	20	ISM	ENSG00000137225.13	ENST00000398776.2	2718	23	7925	-5	7925	5	intron_retention	FALSE	canonical	1	7	junction_18	5.423862327574	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGTGTTTTTATGCC	44166492	True	NA	12	True	AATAAA	-23	NA	44166744	44184406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_44166830_44169280_44169532_44169905_44169976_44172301_44172421_44172939_44173074_44173217_44173387_44176067_44176152_44176252_44176339_44176580_44176656_44176837_44176999_44177241_44177421_44179618_44179631_44179951_44180164_44180459_44180500_44180596_44180663_44180747_44180806_44180932_44180998_44181251_44181321_44182940_44183020_44183118
transcript_171361.known	chr6	+	828	2	FSM	ENSG00000262179.3	ENST00000573382.3	828	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGGCTTTGAAAGTCTA	44216691	True	NA	14	True	AATAAA	-19	NA	44216925	44218234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_44216969_44217449
transcript_171371.known	chr6	+	2283	14	FSM	ENSG00000112759.19	ENST00000371713.6	2283	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	694.769980240789	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGGCTCCCTGTGTCCT	44218641	True	NA	79	True	AATAAA	-18	NA	44219635	44234142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_44219783_44221585_44221686_44227262_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
transcript_171372.known	chr6	+	2358	14	FSM	ENSG00000112759.19	ENST00000651428.1	2358	14	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	670.531609287179	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTTCTTGTTTTTTTCTC	44218558	True	NA	61	True	TTTAAA	-4	NA	44219552	44234124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_44219783_44226060_44226168_44227259_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
transcript_171374.nic	chr6	+	2263	14	NIC	ENSG00000112759.19	novel	2083	13	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	136	junction_2	629.96147153719	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCATGGCTCCCTGTGTCC	44201874	True	NA	78	True	AATAAA	-17	NA	44223523	44234141	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_44223642_44226060_44226168_44227259_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
transcript_171378.nic	chr6	+	2260	14	NIC	ENSG00000112759.19	novel	2083	13	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	225	junction_2	614.014175963409	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCATGGCTCCCTGTGTCC	44201874	True	NA	78	True	AATAAA	-17	NA	44223523	44234141	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_44223642_44226060_44226168_44227262_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
transcript_171387.known	chr6	+	2301	14	FSM	ENSG00000112759.19	ENST00000371724.6	2301	14	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	671.081561018079	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCATGGCTCCCTGTGTCC	44223748	False	NA	78	True	AATAAA	-17	NA	44223799	44234141	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_44223956_44226060_44226168_44227259_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
transcript_171389.known	chr6	+	1998	13	FSM	ENSG00000112759.19	ENST00000652680.1	1998	13	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	536.370207972068	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATACTCCATTCTCCCC	44218633	True	NA	100	True	NA	NA	NA	44219627	44233946	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_44219783_44227259_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
transcript_171393.known	chr6	+	2083	13	FSM	ENSG00000112759.19	ENST00000371755.9	2083	13	0	0	0	0	multi-exon	FALSE	canonical	3	1262	junction_1	228.806990472076	1862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGGCTCCCTGTGTCCT	44201945	True	NA	79	True	AATAAA	-18	NA	44223594	44234142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_44223642_44227262_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
transcript_171409.known	chr6	+	2030	13	FSM	ENSG00000112759.19	ENST00000652453.1	2030	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	542.742111872665	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAACTCCCCATGCCCAGT	44223740	True	NA	-61	True	NA	NA	NA	44223791	44234002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_44223926_44227262_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
transcript_171450.known	chr6	+	1434	10	FSM	ENSG00000112759.19	ENST00000472176.2	1434	10	0	0	0	0	multi-exon	FALSE	canonical	3	1262	junction_1	259.259201058195	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCACAGCTGTATTCATG	44201945	True	NA	NA	False	NA	NA	NA	44223594	44232405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_44223642_44227262_44227343_44229389_44229472_44229588_44229792_44229906_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342
transcript_171477.known	chr6	+	2674	12	FSM	ENSG00000096384.20	ENST00000371554.2	2674	12	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	4279.49636528597	1045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGCTTTCCCTTGTGAA	44247852	False	NA	33	True	AATAAA	-21	NA	44247865	44253883	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_44248080_44248629_44248777_44249376_44249584_44249674_44249835_44250020_44250155_44250290_44250600_44251047_44251214_44251417_44251609_44251736_44251885_44251998_44252268_44253044_44253379_44253488
transcript_17149.known	chr1	-	979	10	FSM	ENSG00000234741.9	ENST00000412059.6	985	10	4	2	0	0	multi-exon	FALSE	canonical	3	1906	junction_9	700.20675958808	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	-173805431	True	NA	-37	True	AATAAA	-14	NA	173867987	173863900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_173864076_173864256_173864705_173865228_173865283_173865470_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
transcript_171491.known	chr6	+	2555	12	FSM	ENSG00000096384.20	ENST00000371646.10	2555	12	0	0	0	0	multi-exon	FALSE	canonical	3	12779	junction_5	1192.07461356138	18588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGCTTTCCCTTGTGAA	44164685	True	NA	33	True	AATAAA	-21	NA	44247100	44253883	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_44247196_44248629_44248777_44249376_44249584_44249674_44249835_44250020_44250155_44250290_44250600_44251047_44251214_44251417_44251609_44251736_44251885_44251998_44252268_44253044_44253379_44253488
transcript_171494.known	chr6	-	2063	4	FSM	ENSG00000157593.19	ENST00000619636.4	2063	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	156.603533378614	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGTCCTGTGTTTTGGT	-44255938	False	NA	-13	True	ATTAAA	-18	NA	44257352	44254101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_44255645_44256341_44256497_44256684_44256879_44257181
transcript_171495.known	chr6	-	2022	4	FSM	ENSG00000157593.19	ENST00000393812.4	2022	4	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_2	10.3387082795139	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCCTGTGTTTTGGTT	-44255058	True	NA	-12	True	ATTAAA	-19	NA	44257528	44254100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_44255645_44256341_44256497_44256684_44256879_44257399
transcript_171499.known	chr6	-	2344	6	FSM	ENSG00000146232.17	ENST00000619360.6	2344	6	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_3	5.91269819963779	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGGGTGCTATGAAGGG	-44264137	True	NA	-2	True	AATAAA	-17	NA	44265551	44258165	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_44259285_44260042_44260283_44260450_44260540_44261625_44261849_44262559_44262663_44264981
transcript_171509.known	chr6	-	4798	22	FSM	ENSG00000124608.5	ENST00000244571.5	4798	22	0	0	0	0	multi-exon	TRUE	canonical	3	69	junction_18	13.2526470209247	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGGGCCCGCCTGGCATC	-44310695	True	NA	-20	True	AGTAAA	-14	NA	44313347	44298730	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_44300712_44301155_44301267_44301380_44301465_44302059_44302171_44302390_44302514_44302801_44302911_44303065_44303176_44303285_44303424_44304180_44304322_44304419_44304534_44304644_44304818_44305053_44305199_44305652_44305787_44306279_44306392_44306493_44306533_44306922_44307032_44307248_44307395_44310298_44310444_44310993_44311162_44311389_44311536_44312071_44312264_44313080
transcript_171551.known	chr6	+	4911	3	FSM	ENSG00000178233.18	ENST00000451188.7	4911	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	2	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGTCCCAGTGTGGCA	44270398	True	NA	20	True	AATAAA	-20	NA	44270449	44279444	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_44270878_44273065_44273507_44275402
transcript_171557.known	chr6	+	6241	16	FSM	ENSG00000096401.8	ENST00000371477.4	6241	16	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_7	28.1862062403265	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTCCTTTTATGTTTA	44386147	True	NA	NA	False	ATTAAA	-19	NA	44387705	44450425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_44387869_44390267_44390372_44392666_44392829_44393445_44393574_44396340_44396441_44403808_44404028_44406322_44406468_44408443_44408633_44419448_44419598_44422646_44422810_44424418_44424584_44426102_44426184_44426481_44426725_44429712_44429911_44445654_44445868_44446606
transcript_171560.nic	chr6	+	2461	15	ISM	ENSG00000096401.8	ENST00000371477.4	6241	16	-199	4718	-199	-4718	5prime_fragment	FALSE	canonical	3	238	junction_7	26.2628977060485	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGATGAAAATTTTGCTTG	NA	False	NA	13	True	NA	NA	NA	44387506	44445707	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_44387869_44390267_44390372_44392666_44392829_44393445_44393574_44396340_44396441_44403808_44404028_44406322_44406468_44408443_44408633_44419448_44419598_44422646_44422810_44424418_44424584_44426102_44426184_44426481_44426725_44429712_44429911_44445654
transcript_171563.nic	chr6	+	2052	13	ISM	ENSG00000096401.8	ENST00000371477.4	6241	16	-199	23859	-199	-23859	5prime_fragment	FALSE	canonical	3	238	junction_7	22.0926081152347	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCACAATGCTTCATTAT	NA	False	NA	33	True	AAAAAG	-4	NA	44387506	44426566	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_44387869_44390267_44390372_44392666_44392829_44393445_44393574_44396340_44396441_44403808_44404028_44406322_44406468_44408443_44408633_44419448_44419598_44422646_44422810_44424418_44424584_44426102_44426184_44426481
transcript_171565.nic	chr6	+	742	6	ISM	ENSG00000096401.8	ENST00000371477.4	6241	16	-14	46546	-14	-46546	5prime_fragment	FALSE	canonical	3	255	junction_3	21.6554842938227	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGAGAGGAGTTGATTAT	44386133	True	NA	NA	False	AAGAAA	-8	NA	44387691	44403879	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_44387869_44390267_44390372_44392666_44392829_44393445_44393574_44396340_44396441_44403808
transcript_171566.nic	chr6	+	1075	6	ISM	ENSG00000096401.8	ENST00000371477.4	6241	16	-199	46398	-199	-46398	5prime_fragment	FALSE	canonical	3	255	junction_3	21.6554842938227	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTGCCTTTCTGATTT	NA	False	NA	7	True	NA	NA	NA	44387506	44404027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_44387869_44390267_44390372_44392666_44392829_44393445_44393574_44396340_44396441_44403808
transcript_171567.nic	chr6	+	831	5	ISM	ENSG00000096401.8	ENST00000371477.4	6241	16	-199	54010	-199	-54010	5prime_fragment	TRUE	canonical	3	255	junction_3	23.9934887000619	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAAACAATTGGAAGAA	NA	False	NA	NA	False	NA	NA	NA	44387506	44396415	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_44387869_44390267_44390372_44392666_44392829_44393445_44393574_44396340
transcript_171572.nnic	chr6	-	1278	11	NNC	ENSG00000196284.17	novel	4211	11	NA	NA	-82	47	intron_retention	TRUE	non_canonical	0	0	junction_9	43.3544692044546	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGAGGGAGTGGGCTGG	-45378024	False	NA	-10	True	AATAAA	-21	NA	45378035	44829719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_44829858_44932652_44932764_44953309_44953418_44954494_44954608_44961752_44961829_45003652_45003793_45014800_45014892_45020545_45020633_45105921_45106007_45231448_45231566_45377823
transcript_171576.nic	chr6	-	2472	2	ISM	ENSG00000196284.17	ENST00000371460.5	2389	13	-15	534279	5	-112056	5prime_fragment	FALSE	canonical	3	114	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTATGTACCTACCAAAATT	-45376259	True	NA	NA	False	AATAAA	-10	NA	45377948	45363010	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_45365302_45377767
transcript_171577.known	chr6	-	5706	6	FSM	ENSG00000112782.19	ENST00000339561.12	5706	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.489897948556636	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAGTGGTCATCTAACTT	-46015849	False	NA	NA	False	AATAAA	-23	NA	46015860	45898455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_45903256_45914227_45914410_45941546_45941654_45949255_45949382_45955134_45955245_46015479
transcript_171579.known	chr6	+	4644	4	FSM	ENSG00000001561.7	ENST00000321037.5	4644	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	3.55902608401044	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCAGTGTCACTGGTGATT	46129611	True	NA	4	True	AATAAA	-40	NA	46129988	46146688	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_46130190_46139550_46140410_46141051_46141223_46143275
transcript_171585.known	chr6	-	3845	5	FSM	ENSG00000112796.10	ENST00000371383.7	3845	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	28.7662997272851	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATCACTTATCATCATT	-46169517	True	NA	-4	True	AATAAA	-23	NA	46170980	46159184	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_46161754_46165386_46165564_46167433_46168298_46170052_46170115_46170807
transcript_171587.known	chr6	-	2544	4	FSM	ENSG00000112796.10	ENST00000230565.3	2544	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	6.84754619472471	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCAAATTGGATAAAACA	-46169508	True	NA	NA	False	ATTAAA	-20	NA	46170971	46160414	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_46161754_46165386_46165564_46167433_46168298_46170807
transcript_171592.nic	chr6	-	1906	3	ISM	ENSG00000112796.10	ENST00000230565.3	2544	4	-39	4310	-30	232	5prime_fragment	FALSE	canonical	3	62	junction_2	7	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTTTTTACATACAGATAA	-46169547	False	NA	NA	False	AATAAA	-1	NA	46171010	46164724	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_46165564_46167433_46168298_46170807
transcript_171594.known	chr6	-	3416	5	FSM	ENSG00000172348.16	ENST00000371374.6	3416	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	5.30919014539883	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGTCCATGTGGTTTAA	-46490712	True	NA	-8	True	AATATA	-14	NA	46491449	46220735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_46223302_46246747_46246920_46248722_46248897_46456751_46456979_46491172
transcript_171597.known	chr6	-	2432	12	FSM	ENSG00000146233.8	ENST00000275016.3	2432	12	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_10	2.86038776773678	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACTGTAGTGGAATCTAT	-46652550	True	NA	NA	False	AATATA	-18	NA	46652818	46549579	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_46550438_46553766_46553855_46587076_46587166_46588033_46588130_46595986_46596121_46625417_46625509_46630962_46631071_46636388_46636483_46637828_46637979_46639493_46639669_46642162_46642299_46652405
transcript_171600.known	chr6	-	1915	12	FSM	ENSG00000146070.17	ENST00000274793.12	1915	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_11	11.1139849359726	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGTTGCAATGATACAAGA	-46734997	True	NA	NA	False	ATTAAA	-23	NA	46735375	46704200	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_46704697_46705152_46705302_46707990_46708162_46709326_46709419_46710544_46710659_46711495_46711620_46712268_46712338_46714459_46714554_46716383_46716529_46716974_46717097_46722782_46722926_46735179
transcript_171601.nnic	chr6	-	1479	11	NIC	ENSG00000146070.17	novel	1915	12	NA	NA	-44	-221	combination_of_known_splicesites	FALSE	canonical	3	17	junction_10	9.55196314900764	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGTTTCAAAACTGTCT	-46735041	True	NA	-14	True	ATTAAA	-16	NA	46735419	46704537	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_46704697_46705152_46705302_46707990_46708162_46709326_46709419_46710544_46710659_46711495_46711620_46712268_46712338_46714459_46714554_46716383_46716529_46716974_46717097_46735179
transcript_171603.known	chr6	+	2526	7	FSM	ENSG00000153291.16	ENST00000411689.6	2526	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	26.717139733803	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTGATTTAGCTTTATTC	NA	False	NA	32	True	AGTAAA	-40	NA	46652914	46678190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_46653299_46655842_46656035_46658961_46659047_46662375_46662499_46664773_46664887_46668708_46668794_46676646
transcript_171607.known	chr6	-	3595	6	FSM	ENSG00000146072.6	ENST00000296861.2	3595	6	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_5	13.2060592153753	212	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAGTAGTCCGAGTATAT	-47303147	True	NA	-18	True	AATAAA	-17	NA	47309905	47231531	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_47232995_47234669_47234899_47253255_47253522_47283937_47284433_47285943_47286596_47309415
transcript_171612.known	chr6	-	330	1	FSM	ENSG00000270761.1	ENST00000604014.1	330	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTAGTCTCTTGTCAG	-47477497	False	NA	-23	True	AATAAA	-15	NA	47477572	47477242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_47477200_47477600
transcript_171613.known	chr6	+	5412	18	FSM	ENSG00000198087.7	ENST00000359314.5	5412	18	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_7	23.6698748576867	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGACCCGTATGACTTT	47467700	True	NA	NA	False	AATAAA	-24	NA	47477788	47627263	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_47478249_47503279_47503441_47533601_47533756_47544605_47544707_47554645_47554767_47574063_47574252_47576523_47576603_47577008_47577104_47579384_47579490_47580863_47580901_47582002_47582066_47595860_47596027_47599300_47599444_47606164_47606278_47607926_47608029_47609122_47609305_47612472_47612537_47624185
transcript_171617.nic	chr6	+	2344	17	ISM	ENSG00000198087.7	ENST00000359314.5	5412	18	-49	14766	-49	2984	5prime_fragment	FALSE	canonical	3	278	junction_7	21.2058364607483	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTTGGAAGAAGAGAAGAC	47467651	True	NA	21	True	NA	NA	NA	47477739	47612497	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_47478249_47503279_47503441_47533601_47533756_47544605_47544707_47554645_47554767_47574063_47574252_47576523_47576603_47577008_47577104_47579384_47579490_47580863_47580901_47582002_47582066_47595860_47596027_47599300_47599444_47606164_47606278_47607926_47608029_47609122_47609305_47612472
transcript_171623.nic	chr6	+	2074	15	ISM	ENSG00000198087.7	ENST00000359314.5	5412	18	-49	19298	-49	-1548	5prime_fragment	FALSE	canonical	3	278	junction_7	19.8341336373147	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGACAGTGCCAACCT	47467651	True	NA	NA	False	NA	NA	NA	47477739	47607965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_47478249_47503279_47503441_47533601_47533756_47544605_47544707_47554645_47554767_47574063_47574252_47576523_47576603_47577008_47577104_47579384_47579490_47580863_47580901_47582002_47582066_47595860_47596027_47599300_47599444_47606164_47606278_47607926
transcript_171626.nic	chr6	+	1289	7	ISM	ENSG00000198087.7	ENST00000359314.5	5412	18	-49	50685	-49	-3328	5prime_fragment	FALSE	canonical	3	289	junction_5	17.6792408082348	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGATACCGAAGGTAAAATT	47467651	True	NA	NA	False	NA	NA	NA	47477739	47576578	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_47478249_47503279_47503441_47533601_47533756_47544605_47544707_47554645_47554767_47574063_47574252_47576523
transcript_171627.nic	chr6	+	1225	6	ISM	ENSG00000198087.7	ENST00000359314.5	5412	18	-49	53021	-49	-5664	5prime_fragment	FALSE	canonical	3	289	junction_5	16.8	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAAAAGGTGGTAATGAT	47467651	True	NA	NA	False	NA	NA	NA	47477739	47574242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_47478249_47503279_47503441_47533601_47533756_47544605_47544707_47554645_47554767_47574063
transcript_171634.nic	chr6	+	813	3	ISM	ENSG00000198087.7	ENST00000359314.5	5412	18	-49	93519	-49	-11401	5prime_fragment	FALSE	canonical	3	299	junction_1	12	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTAAGAAGAGTATGTAAA	47467651	True	NA	NA	False	NA	NA	NA	47477739	47533744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_47478249_47503279_47503441_47533601
transcript_171636.known	chr6	-	25280	5	FSM	ENSG00000244694.8	ENST00000339488.9	25280	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.77491721763537	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGTGTGGCTCTTTCCT	-48109381	True	NA	NA	False	ATTAAA	-17	NA	48111197	47856672	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_47879937_48008633_48009115_48068229_48068642_48068952_48069927_48111048
transcript_171637.known	chr6	-	803	3	FSM	ENSG00000286811.1	ENST00000661865.1	803	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATCTGCCCCCCCACCC	-48109262	False	NA	NA	False	AAAAAG	-7	NA	48111078	48069212	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_48069927_48102126_48102186_48111048
transcript_171638.nnic	chr6	-	715	3	NNC	ENSG00000286811.1	novel	803	3	NA	NA	-170	-29130	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	0.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAGAAGA	-48109432	True	NA	NA	False	NA	NA	NA	48111248	48098342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_48098799_48102126_48102186_48111048
transcript_17164.known	chr1	-	632	8	FSM	ENSG00000234741.9	ENST00000690941.1	1443	8	0	811	0	289	multi-exon	FALSE	canonical	3	1906	junction_7	777.983972344219	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCACCATGCCCCGCCTC	-173805433	True	NA	NA	False	NA	NA	NA	173867989	173864954	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_173865283_173865470_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
transcript_171642.known	chr6	-	3811	13	FSM	ENSG00000146085.8	ENST00000274813.4	3811	13	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_12	28.2826753017147	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTCTTGACAGTATCTTT	-49461029	True	NA	-9	True	AATAAA	-20	NA	49463253	49430359	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_49431857_49435455_49435624_49440205_49440354_49441839_49441972_49444638_49444755_49447669_49447786_49448815_49448928_49451465_49451715_49453584_49453757_49456079_49456238_49457690_49458059_49459081_49459506_49463102
transcript_171651.nnic	chr6	-	2592	13	NNC	ENSG00000146085.8	novel	3811	13	NA	NA	-13	-1167	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_12	52.144763772491	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCTAAAAACTCTCTATAC	-49461042	True	NA	NA	False	AATAAA	-8	NA	49463266	49431526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_49431857_49435455_49435624_49440205_49440354_49441839_49441972_49444638_49444755_49447669_49447786_49448815_49448928_49451465_49451715_49453584_49453757_49456079_49456238_49457690_49458059_49459081_49459506_49463167
transcript_171656.known	chr6	+	1741	9	FSM	ENSG00000031691.7	ENST00000335783.4	1741	9	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	29.1794019815349	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGACCTATAATATCAG	49461580	True	NA	78	True	AATAAA	-20	NA	49463369	49493107	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_49463454_49470158_49470279_49470973_49471029_49472062_49472184_49472789_49472859_49480950_49481081_49488351_49488472_49488606_49488685_49492143
transcript_171678.nic	chr6	+	2665	3	NIC	ENSG00000197261.12	novel	1820	5	NA	NA	-275	0	intron_retention	FALSE	canonical	0	0	junction_2	11.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTACAATTTAGTTGTCT	NA	False	NA	2	True	AATAAA	-12	NA	49550390	49561907	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_49552571_49554876_49555158_49561703
transcript_171682.known	chr6	+	442	2	FSM	ENSG00000197261.12	ENST00000424426.1	442	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGTGTTAGAAAGAAAACGA	49550998	False	NA	NA	False	NA	NA	NA	49551025	49552057	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_49551291_49551880
transcript_171683.known	chr6	+	650	2	FSM	ENSG00000197261.12	ENST00000526429.1	650	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTTTATTAAAAGAAACAG	49552339	False	NA	NA	False	GATAAA	-37	NA	49552352	49555308	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_49552571_49554876
transcript_171701.nic	chr6	-	3279	18	NIC	ENSG00000112118.20	novel	3208	17	NA	NA	-65	-5	combination_of_known_junctions	FALSE	canonical	3	170	junction_2	842.501005718496	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGTCTTAATAGTCATAG	-52250200	True	NA	-16	True	AATAAA	-18	NA	52284807	52264019	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_52264787_52265234_52265386_52266074_52266145_52266610_52266697_52267864_52267969_52269085_52269227_52272300_52272452_52273229_52273357_52273741_52273917_52276267_52276477_52277066_52277199_52277534_52277689_52278741_52278851_52279360_52279600_52282044_52282176_52282652_52282862_52283293_52283407_52284596
transcript_171721.known	chr6	-	3068	17	FSM	ENSG00000112118.20	ENST00000596288.7	3068	17	0	0	0	0	multi-exon	FALSE	canonical	3	2428	junction_6	184.466365074368	6708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAATAGTCATAGTGTGT	-52250135	True	NA	-11	True	AATAAA	-23	NA	52284742	52264014	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_52264787_52266074_52266145_52266610_52266697_52267864_52267969_52269085_52269227_52272300_52272452_52273229_52273357_52273741_52273917_52276267_52276477_52277066_52277199_52277534_52277689_52278741_52278851_52279360_52279600_52282044_52282176_52282652_52282862_52283293_52283407_52284596
transcript_171753.known	chr6	-	2523	16	FSM	ENSG00000112118.20	ENST00000419835.8	2523	16	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_15	714.629992840118	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCTCGTCTCTGAACTTG	NA	False	NA	NA	False	NA	NA	NA	52284881	52264585	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_52264787_52266074_52266145_52266610_52266697_52267864_52267969_52269085_52269227_52272300_52272452_52273229_52273357_52273741_52273917_52276267_52276477_52277066_52277199_52277534_52277689_52278741_52278851_52279360_52279600_52282044_52282176_52282652_52282862_52284596
transcript_17181.known	chr1	-	1771	6	FSM	ENSG00000120334.16	ENST00000367710.7	1771	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	25.4746933249451	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGCGTTTATTATGTTTA	-173823806	False	NA	NA	False	AATAAA	-21	NA	173824174	173799849	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_173800520_173802962_173803506_173807266_173807519_173811131_173811307_173823925_173824020_173824137
transcript_17182.known	chr1	-	2706	6	FSM	ENSG00000120334.16	ENST00000682279.1	2706	6	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_3	11.1785508899857	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATGTGTTTATCAATGTC	-173824515	True	NA	NA	False	ATTAAA	-19	NA	173824883	173799549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_173800520_173802962_173803506_173807266_173807519_173811131_173811307_173823925_173824020_173824211
transcript_171830.known	chr6	+	6849	11	FSM	ENSG00000096093.16	ENST00000371068.11	6849	11	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	6.38435587980495	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAACTGACTCTCCATCCT	52419594	True	NA	NA	False	AATAAA	-30	NA	52420341	52497198	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_52420474_52423945_52424168_52438303_52438592_52452687_52452838_52454094_52454288_52464894_52465116_52469332_52469474_52479036_52479251_52479639_52479788_52490139_52490351_52492269
transcript_171832.known	chr6	+	3509	11	FSM	ENSG00000096093.16	ENST00000635911.1	3509	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	22.1226128655726	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATAGAGGCATTTACAGG	52419530	True	NA	-2	True	AATACA	-11	NA	52420277	52492409	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_52420474_52423686_52423815_52423945_52424168_52438303_52438592_52452687_52454288_52464894_52465116_52469332_52469474_52479036_52479251_52479639_52479788_52490139_52490351_52492269
transcript_171834.known	chr6	+	4004	10	FSM	ENSG00000096093.16	ENST00000637340.1	4004	10	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	6.08174763706845	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAGGATCTAAGATTGGT	NA	False	NA	86	True	ACTAAA	-8	NA	52419742	52492497	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_52420474_52423945_52424168_52438303_52438592_52452687_52454288_52464894_52465116_52469332_52469474_52479036_52479251_52479639_52479788_52490139_52490351_52492269
transcript_171835.known	chr6	+	1896	6	FSM	ENSG00000096093.16	ENST00000637200.1	1896	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	26.0415053328336	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTCATATCAGTCATATAT	52419506	True	NA	NA	False	NA	NA	NA	52420253	52453543	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_52420474_52423945_52424168_52429968_52430132_52430227_52430375_52438303_52438592_52452687
transcript_171838.known	chr6	+	2089	9	FSM	ENSG00000096093.16	ENST00000637263.1	2089	9	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	6.08147802758507	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGTCATGTGTATT	52419566	True	NA	NA	False	CATAAA	-16	NA	52420313	52480139	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_52420474_52423945_52424168_52438303_52438592_52452687_52452838_52454094_52454288_52464894_52465116_52469332_52469474_52479036_52479251_52479639
transcript_171839.known	chr6	+	2133	11	FSM	ENSG00000096093.16	ENST00000637089.1	2133	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	17.3043347170586	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACATACACTCCTTAAGTT	52419541	True	NA	1	True	AATAAA	-12	NA	52420288	52495768	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_52420474_52423945_52424168_52438303_52438592_52452687_52452838_52454094_52454288_52464894_52465116_52469332_52469474_52479036_52479251_52479639_52479788_52490139_52490351_52495608
transcript_171840.known	chr6	+	4715	2	FSM	ENSG00000170915.9	ENST00000442253.3	4715	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGTAGTGTCAGCAGTT	52360817	True	NA	28	True	ATTAAA	-18	NA	52362150	52407777	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_52362250_52403161
transcript_171845.known	chr6	-	7047	11	FSM	ENSG00000065308.5	ENST00000182527.4	7047	11	0	0	0	0	multi-exon	TRUE	canonical	3	64	junction_8	10.476640682967	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAATTGTCTCATAATTA	-52573147	True	NA	-15	True	AATAAA	-14	NA	52577060	52497407	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_52503271_52504590_52504755_52505598_52505743_52506031_52506137_52507552_52507624_52508233_52508319_52509527_52509587_52516005_52516123_52516627_52516738_52535782_52535847_52576795
transcript_171848.nnic	chr6	-	3846	10	NIC	ENSG00000065308.5	novel	7047	11	NA	NA	-20	-3111	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	25.3688834384484	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGAGACCATGAGTGGGG	-52573167	True	NA	NA	False	AAAACA	-9	NA	52577080	52500518	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_52503271_52504590_52504755_52505598_52505743_52506031_52506137_52507552_52507624_52508233_52508319_52509527_52509587_52516005_52516123_52535782_52535847_52576795
transcript_171851.nnic	chr6	-	3729	9	NIC	ENSG00000065308.5	novel	7047	11	NA	NA	-20	-3111	combination_of_known_splicesites	TRUE	canonical	2	2	junction_7	26.6023965085855	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGAGACCATGAGTGGGG	-52573167	True	NA	NA	False	AAAACA	-9	NA	52577080	52500518	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_52503271_52504590_52504755_52505598_52505743_52506031_52506137_52507552_52507624_52508233_52508319_52509527_52509587_52535782_52535847_52576795
transcript_171857.known	chr6	+	2162	4	FSM	ENSG00000225791.7	ENST00000666605.1	2162	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	11.8133634311129	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTAATGCTAAAATTGAC	52576846	True	NA	-8	True	AATAAA	-2	NA	52577180	52583974	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_52577652_52578049_52578394_52579374_52579610_52582862
transcript_171858.known	chr6	+	2319	4	FSM	ENSG00000225791.7	ENST00000658849.1	2319	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	9.79795897113271	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGCTAAAATTGACTGAAAA	52576896	True	NA	-2	True	AATAAA	-8	NA	52577230	52583980	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_52577652_52578049_52578595_52579374_52579610_52582862
transcript_171864.known	chr6	+	2744	3	FSM	ENSG00000225791.7	ENST00000663931.1	2744	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	6	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGCTAAAATTGACTGAAAA	52576869	True	NA	-2	True	AATAAA	-8	NA	52577203	52583980	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_52578595_52579374_52579610_52582862
transcript_171865.known	chr6	+	2500	3	FSM	ENSG00000225791.7	ENST00000606714.6	2500	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	13	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAAATTGATCTGCTTTT	52576925	True	NA	11	True	AATAAA	-21	NA	52577259	52583993	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_52578394_52579374_52579610_52582862
transcript_171866.known	chr6	+	2527	4	FSM	ENSG00000225791.7	ENST00000667019.1	2527	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	14.9666295470958	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTAATGCTAAAATTGAC	52576972	True	NA	-8	True	AATAAA	-2	NA	52577306	52583974	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_52578394_52578501_52578595_52579374_52579610_52582862
transcript_171867.known	chr6	+	3589	3	FSM	ENSG00000216775.4	ENST00000643631.2	3591	3	0	2	0	-2	multi-exon	FALSE	canonical	3	84	junction_2	19	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTGTGTATTTTATTTT	NA	False	NA	2	True	AATAAA	-16	NA	52664365	52669153	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_52665420_52666388_52666519_52666748
transcript_171868.known	chr6	+	3757	2	FSM	ENSG00000216775.4	ENST00000602367.2	3757	2	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTGTATTTTATTTTGT	52663885	True	NA	4	True	AATAAA	-18	NA	52664429	52669155	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_52665420_52666388
transcript_17187.known	chr1	+	2300	5	FSM	ENSG00000185278.15	ENST00000427304.5	2300	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	3.34477204006491	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATGAATACTGGTGG	173867739	True	NA	NA	False	NA	NA	NA	173868354	173886636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_173868406_173868924_173869121_173870196_173871149_173873466_173873567_173885635
transcript_171872.nnic	chr6	+	952	5	NNC	ENSG00000096092.6	novel	988	5	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	144.874730370759	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTCTTTCATGTCAGT	52667760	True	NA	17	True	AATAAA	-18	NA	52671078	52686588	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_52671176_52677086_52677173_52681812_52681915_52684077_52684166_52686009
transcript_171873.known	chr6	+	988	5	FSM	ENSG00000096092.6	ENST00000211314.5	988	5	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_3	29.757352032733	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTCTTTCATGTCAGT	52667794	True	NA	17	True	AATAAA	-18	NA	52671112	52686588	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_52671246_52677086_52677173_52681812_52681915_52684077_52684166_52686009
transcript_171876.known	chr6	-	1240	7	FSM	ENSG00000170899.11	ENST00000370963.9	1240	7	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_6	17.410884207555	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTGTCTTGTTGTGAG	-52993369	True	NA	-8	True	AATAAA	-17	NA	52995284	52977952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_52978593_52982573_52982706_52984463_52984606_52985450_52985584_52987356_52987409_52994156_52994262_52995248
transcript_171877.nnic	chr6	-	1411	7	NNC	ENSG00000170899.11	novel	1240	7	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_6	54.5374489074556	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTGTCTTGTTGTGAG	-52993400	True	NA	-8	True	AATAAA	-17	NA	52995315	52977952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_52978593_52982573_52982706_52984463_52984606_52985450_52985584_52987356_52987409_52994156_52994402_52995248
transcript_171885.known	chr6	+	4743	13	FSM	ENSG00000112146.17	ENST00000323557.12	4743	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	89.5530568992483	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGCATACTTCTTGTAT	53062305	True	NA	6	True	AATAAA	-17	NA	53065403	53100873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_53065793_53071056_53071144_53073480_53073640_53076485_53076544_53078798_53078899_53080967_53081099_53082503_53082619_53092428_53092548_53092733_53092825_53093465_53093562_53093884_53093979_53095512_53095665_53097721
transcript_171889.nic	chr6	+	1455	11	ISM	ENSG00000112146.17	ENST00000323557.12	4743	13	-22	6901	-22	656	5prime_fragment	TRUE	non_canonical	0	0	junction_3	95.9635868441775	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGTGAGTATACGAGG	53065321	False	NA	NA	False	AAGAAA	-4	NA	53065381	53093972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_53065793_53071056_53071144_53073480_53073640_53076485_53076544_53078798_53078899_53080967_53081099_53082503_53082619_53092428_53092548_53092733_53092825_53093465_53093562_53093884
transcript_17189.known	chr1	-	827	5	FSM	ENSG00000120334.16	ENST00000460816.5	827	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	37.7979827504061	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATTGATAACTTGCCTAA	-173822575	True	NA	NA	False	NA	NA	NA	173824335	173800411	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_173800520_173807266_173807519_173811131_173811307_173823925_173824020_173824137
transcript_171894.nic	chr6	+	656	3	ISM	ENSG00000112146.17	ENST00000323557.12	4743	13	-22	27235	-22	0	5prime_fragment	FALSE	canonical	1	92	junction_2	100.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAGTATTATAGATATTG	53065321	False	NA	NA	False	AAGAAA	-2	NA	53065381	53073638	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_53065793_53071056_53071144_53073480
transcript_171896.known	chr6	-	6146	14	FSM	ENSG00000112144.16	ENST00000676107.1	6146	14	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_13	4.93628037142598	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTTGAGTGTTCTGTTT	-53060244	True	NA	NA	False	AATAAA	-19	NA	53061824	53001302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_53005304_53006314_53006438_53009438_53009568_53011768_53011918_53012036_53012228_53013661_53013983_53016082_53016251_53018329_53018502_53019226_53019360_53031064_53031145_53032532_53032655_53037938_53037994_53041135_53041409_53061595
transcript_171903.known	chr6	-	2765	8	FSM	ENSG00000012660.14	ENST00000304434.11	2765	8	0	0	0	0	multi-exon	FALSE	canonical	3	787	junction_2	49.5889223969406	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGCCTGCATTTTACAT	-53333954	True	NA	-17	True	ATTAAA	-14	NA	53348950	53267403	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_53269271_53270592_53270728_53273219_53273345_53275089_53275262_53276178_53276257_53291775_53291964_53295641_53295708_53348816
transcript_171909.known	chr6	-	2875	7	FSM	ENSG00000012660.14	ENST00000542638.5	2875	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	321.627329200876	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCATTTTACATTTTTTG	NA	False	NA	-11	True	ATTAAA	-20	NA	53349179	53267397	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_53269271_53270592_53270728_53275089_53275262_53276178_53276257_53291775_53291964_53295641_53295708_53348816
transcript_171910.known	chr6	-	580	3	FSM	ENSG00000012660.14	ENST00000370913.5	580	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	394.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGAGATTTGTGTGTATT	-53333930	True	NA	-5	True	AATAAA	-32	NA	53348926	53294087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_53294492_53295641_53295708_53348816
transcript_171912.known	chr6	-	3785	16	FSM	ENSG00000001084.13	ENST00000650454.1	3785	16	0	0	0	0	multi-exon	TRUE	canonical	3	185	junction_14	16.9383194758709	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGAGTGTGTGTGAGTT	-53543237	True	NA	-4	True	AATAAA	-28	NA	53545101	53497340	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_53498968_53500044_53500166_53500246_53500351_53500431_53500514_53505391_53505497_53505802_53505896_53506912_53507026_53507479_53507619_53508594_53508712_53509175_53509251_53514203_53514338_53514438_53514498_53516108_53516223_53520777_53520961_53522414_53522528_53544495
transcript_171917.known	chr6	-	1800	15	FSM	ENSG00000001084.13	ENST00000513939.6	1800	15	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_12	55.7195968164501	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATTCTACAGAAAGAAAAA	-53544631	False	NA	NA	False	AGTAAA	-35	NA	53544645	53498755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_53498968_53500044_53500166_53500246_53500351_53500431_53500514_53505391_53505497_53505802_53505896_53506912_53507026_53507479_53507619_53508594_53508712_53509175_53509251_53514203_53514338_53514438_53514498_53520777_53520961_53522414_53522528_53544495
transcript_171926.known	chr6	-	2289	16	FSM	ENSG00000001084.13	ENST00000643939.1	2289	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	54.5456383835286	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAGACTACCTGGGAC	-53544619	False	NA	-66	True	NA	NA	NA	53544633	53498386	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_53498968_53500044_53500166_53500246_53500351_53500431_53500514_53505391_53505497_53505802_53505896_53506912_53507026_53507479_53507619_53508594_53508712_53509175_53509251_53514203_53514338_53514438_53514498_53516108_53516241_53520777_53520961_53522414_53522528_53544495
transcript_171933.known	chr6	+	3159	14	FSM	ENSG00000137269.15	ENST00000370888.6	3159	14	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	13.9084070612795	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTTTTTAAAATTATTAC	53793616	True	NA	23	True	AATAAA	-23	NA	53795004	53924125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_53795416_53842109_53842228_53878992_53879072_53882886_53882977_53896497_53896555_53896828_53896893_53897284_53897360_53899746_53899892_53902628_53902748_53904378_53904463_53913853_53913970_53919497_53919671_53920624_53920762_53922634
transcript_171934.known	chr6	-	4173	30	FSM	ENSG00000124749.17	ENST00000244728.10	4173	30	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_16	9.13278970524548	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAATGTCTTTTTTTATA	-56247177	True	NA	NA	False	AATAAA	-18	NA	56247580	56056589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_56057845_56059164_56059243_56060017_56060219_56060740_56060796_56060890_56061038_56061648_56061682_56064577_56064623_56067294_56067331_56069045_56069118_56070744_56070799_56074231_56074286_56075478_56075533_56077528_56077574_56101471_56101526_56124061_56124116_56124238_56124293_56125566_56125621_56126095_56126150_56141784_56141839_56141929_56141984_56156886_56156950_56164422_56164507_56164813_56164823_56166905_56166984_56168123_56168298_56170648_56170866_56170959_56171129_56179577_56180130_56182530_56182657_56247386
transcript_171941.nic	chr6	-	5196	34	ISM	ENSG00000151914.22	ENST00000361203.7	22431	98	-674	152540	-162	3089	5prime_fragment	TRUE	canonical	1	4	junction_2	4.54666650509359	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTGGTTGTAGTTAGC	-56843816	False	NA	0	True	AAAACA	-10	NA	56843827	56611507	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_56611597_56614355_56614485_56624529_56624629_56625156_56625265_56627203_56627288_56627998_56628162_56629249_56629444_56630244_56630384_56631210_56631390_56631882_56632041_56632853_56633038_56634131_56634259_56634461_56634617_56634800_56634954_56635588_56635715_56636556_56636653_56639258_56639364_56639449_56639612_56639695_56639774_56639928_56640058_56640142_56640606_56641946_56642102_56642409_56642504_56645865_56645994_56646086_56646183_56648569_56648690_56650925_56651033_56651131_56651245_56670640_56670808_56699652_56699746_56701887_56701966_56704279_56704370_56735227_56735290_56843054
transcript_171946.nic	chr6	-	4958	32	ISM	ENSG00000151914.22	ENST00000361203.7	22431	98	-654	165562	-142	-157	5prime_fragment	FALSE	canonical	2	5	junction_8	4.24631810887854	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATCATTAACAGTGAGCA	-56843796	False	NA	NA	False	ATTAAA	-40	NA	56843807	56624529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_56624629_56625156_56625265_56627203_56627288_56627998_56628162_56629249_56629444_56630244_56630384_56631210_56631390_56631882_56632041_56632853_56633038_56634131_56634259_56634461_56634617_56634800_56634954_56635588_56635715_56636556_56636653_56639258_56639364_56639449_56639612_56639695_56639774_56639928_56640058_56640142_56640606_56641946_56642102_56642409_56642504_56645865_56645994_56646086_56646183_56648569_56648690_56650925_56651033_56651131_56651245_56670640_56670808_56699652_56699746_56701887_56701966_56704279_56704370_56735227_56735290_56843054
transcript_171954.nic	chr6	-	3421	21	ISM	ENSG00000151914.22	ENST00000361203.7	22431	98	-816	175942	-304	4006	5prime_fragment	FALSE	canonical	2	6	junction_9	3.81149576937979	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCTAATGGGAAAAGCAAAAA	-56843958	False	NA	-7	True	NA	NA	NA	56843969	56634909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_56634954_56635588_56635715_56636556_56636653_56639258_56639364_56639449_56639612_56639695_56639774_56639928_56640058_56640142_56640606_56641946_56642102_56642409_56642504_56645865_56645994_56646086_56646183_56648569_56648690_56650925_56651033_56651131_56651245_56670640_56670808_56699652_56699746_56701887_56701966_56704279_56704370_56735227_56735290_56843054
transcript_171961.nic	chr6	-	2790	18	ISM	ENSG00000151914.22	ENST00000361203.7	22431	98	-530	180370	-18	-402	5prime_fragment	FALSE	canonical	2	6	junction_6	3.92490054532054	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGAAAATATTAAATCAG	-56840786	True	NA	NA	False	NA	NA	NA	56843683	56639337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_56639364_56639449_56639612_56639695_56639774_56639928_56640058_56640142_56640606_56641946_56642102_56642409_56642504_56645865_56645994_56646086_56646183_56648569_56648690_56650925_56651033_56651131_56651245_56670640_56670808_56699652_56699746_56701887_56701966_56704279_56704370_56735227_56735290_56843054
transcript_171965.nic	chr6	-	2798	17	ISM	ENSG00000151914.22	ENST00000361203.7	22431	98	-576	180494	-64	-526	5prime_fragment	FALSE	canonical	2	6	junction_5	3.9350190596743	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTATCATGCTGTAAGTAC	-56840832	True	NA	NA	False	NA	NA	NA	56843729	56639461	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_56639612_56639695_56639774_56639928_56640058_56640142_56640606_56641946_56642102_56642409_56642504_56645865_56645994_56646086_56646183_56648569_56648690_56650925_56651033_56651131_56651245_56670640_56670808_56699652_56699746_56701887_56701966_56704279_56704370_56735227_56735290_56843054
transcript_171976.nic	chr6	-	1670	10	ISM	ENSG00000151914.22	ENST00000361203.7	22431	98	-671	187145	-159	-3926	5prime_fragment	FALSE	canonical	2	8	junction_1	2.78886675511359	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAACGTCTATATAAATTA	-56843813	False	NA	NA	False	AAGAAA	-37	NA	56843824	56646112	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_56646183_56648569_56648690_56650925_56651033_56651131_56651245_56670640_56670808_56699652_56699746_56701887_56701966_56704279_56704370_56735227_56735290_56843054
transcript_17198.known	chr1	-	1060	3	FSM	ENSG00000234741.9	ENST00000421068.5	1060	3	0	0	0	0	multi-exon	FALSE	canonical	3	1906	junction_2	997	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATGGTGATATGCTTA	-173805431	True	NA	NA	False	AATGAA	-25	NA	173867987	173865817	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_173866797_173866990_173867044_173867959
transcript_171981.known	chr6	-	735	6	FSM	ENSG00000151914.22	ENST00000521821.1	735	6	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	2.28035085019828	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCCCATGCCTGTAATCC	-56843135	False	NA	NA	False	AATAAA	-17	NA	56843146	56670487	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_56670808_56699652_56699746_56701887_56701966_56704279_56704370_56735227_56735290_56843054
transcript_171984.known	chr6	-	4598	34	ISM	ENSG00000151914.22	ENST00000520645.6	17436	93	0	156465	0	133	5prime_fragment	FALSE	canonical	0	0	junction_32	5.1661112293639	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAACATGTTGAAAAAGC	-56851940	False	NA	NA	False	AAGAAA	-3	NA	56851951	56614463	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_56614485_56624529_56624629_56625156_56625265_56627203_56627288_56627998_56628162_56629249_56629444_56630244_56630384_56631210_56631390_56631882_56632041_56632853_56633038_56634131_56634259_56634461_56634617_56634800_56634954_56635588_56635715_56636556_56636653_56639258_56639364_56639449_56639612_56639695_56639774_56639928_56640058_56640142_56640606_56641946_56642102_56642409_56642504_56645865_56645994_56646086_56646183_56648569_56648690_56650925_56651033_56651131_56651245_56670640_56670808_56699652_56699746_56701887_56701966_56704279_56704370_56735227_56735290_56851396_56851605_56851787
transcript_171985.known	chr6	+	2568	7	FSM	ENSG00000151917.18	ENST00000370746.8	2568	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	10.6405931330082	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATTTTCTTGTTTCTTTA	56954888	True	NA	NA	False	AATAAA	-20	NA	56955106	57027346	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_56955461_56981710_56981931_56992377_56992556_57015132_57015354_57017206_57017400_57018420_57018558_57026081
transcript_171987.known	chr6	+	3497	4	FSM	ENSG00000151917.18	ENST00000370748.7	3497	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	2.94392028877595	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATATAAGGGAGTTAATA	56954907	True	NA	NA	False	AATAAA	-15	NA	56955125	57010944	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_56955461_56981710_56981931_56992377_56992556_57008180
transcript_171988.known	chr6	+	2789	4	FSM	ENSG00000168116.14	ENST00000370733.5	2789	4	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_3	21.9544984001001	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTTGGCTCTTGTCTTT	57044165	True	NA	24	True	AATAAA	-25	NA	57046692	57055225	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_57046777_57047312_57047397_57050773_57050855_57052685
transcript_171995.known	chr6	+	2883	3	FSM	ENSG00000168116.14	ENST00000545356.5	2883	3	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_2	123.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTCTCATTTCCATATC	57045053	True	NA	38	True	AATAAA	-39	NA	57046531	57055239	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_57046777_57047312_57047397_57052685
transcript_1720.known	chr1	-	3525	5	FSM	ENSG00000227372.12	ENST00000423764.6	3525	5	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	50.2070712151187	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGCTGAAAGCACTC	-3741575	True	NA	-16	True	TTTAAA	-19	NA	3747373	3737148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3738514_3740232_3740388_3742803_3742912_3743060_3743191_3745606
transcript_17200.known	chr1	-	2473	2	FSM	ENSG00000120334.16	ENST00000495275.1	2473	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGGCTGAAGTACACAAA	-173824105	False	NA	NA	False	NA	NA	NA	173824473	173821808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_173824020_173824211
transcript_172001.known	chr6	+	5088	15	FSM	ENSG00000112200.17	ENST00000370706.9	5088	15	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_5	27.9884269085693	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTTATCTTTTCATTAC	57082201	True	NA	8	True	AGTAAA	-20	NA	57090187	57170305	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_57090275_57090810_57090895_57099060_57099142_57124733_57124860_57128728_57128841_57133041_57133193_57134743_57134871_57141301_57141456_57141947_57142096_57147089_57148694_57150718_57150863_57152220_57152352_57153860_57154048_57161083_57161153_57168422
transcript_172004.known	chr6	+	4998	14	FSM	ENSG00000112200.17	ENST00000357489.7	4998	14	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_10	67.9008152385461	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTTGACTTTAATTTAG	57089922	False	NA	14	True	ATTAAA	-17	NA	57090029	57170201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_57090275_57090810_57090895_57099060_57099142_57124733_57124860_57128728_57128841_57133041_57133193_57134743_57134871_57141301_57141456_57141947_57142096_57147089_57148694_57152220_57152352_57153860_57154048_57161083_57161153_57168422
transcript_172005.known	chr6	+	3632	13	FSM	ENSG00000112200.17	ENST00000491832.6	3632	13	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_5	27.6691765929768	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACTTTCTTCTGTACCTT	57082202	True	NA	NA	False	NA	NA	NA	57090188	57154544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_57090275_57090810_57090895_57099060_57099142_57124733_57124860_57128728_57128841_57133041_57133193_57134743_57134871_57141301_57141456_57141947_57142096_57147089_57148694_57150718_57150863_57152220_57152352_57153860
transcript_172009.known	chr6	+	3402	11	FSM	ENSG00000112200.17	ENST00000444273.6	3402	11	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_5	30.0601064535707	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	57082126	True	NA	NA	False	NA	NA	NA	57090112	57151371	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_57090275_57090810_57090895_57099060_57099142_57124733_57124860_57128728_57128841_57133041_57133193_57134743_57134871_57141301_57141456_57141947_57142096_57147089_57148694_57150718
transcript_17201.known	chr1	-	3145	2	FSM	ENSG00000234741.9	ENST00000650796.1	3145	2	0	0	0	0	multi-exon	FALSE	canonical	3	1906	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCCAATTTTAATAAATTT	-173805435	True	NA	-67	True	ATTAAA	-7	NA	173867991	173863930	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_173867044_173867959
transcript_172012.known	chr6	-	4830	7	FSM	ENSG00000112210.12	ENST00000468148.6	4830	7	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_6	14.9071198499986	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGTGATATGTATGAT	-57221502	True	NA	0	True	AATAAA	-19	NA	57222307	57186991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_57190601_57193841_57193935_57194769_57194853_57196449_57196607_57207627_57207714_57210225_57210446_57221725
transcript_172019.known	chr6	+	9478	4	FSM	ENSG00000112200.17	ENST00000370708.8	9478	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	122.956180089584	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCTCTTTTCTCAAGTAC	57082089	True	NA	NA	False	ATTAAA	-20	NA	57090075	57109716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_57090275_57090810_57090895_57099060_57099142_57100602
transcript_17202.known	chr1	-	745	10	ISM	ENSG00000234741.9	ENST00000422183.6	778	11	948	1	2	0	3prime_fragment	FALSE	canonical	3	2064	junction_4	528.073951985356	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGAGTGTGTAGTGTTT	-173867032	False	62556	-38	True	AATAAA	-13	NA	173867043	173863901	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_173864305_173864483_173864507_173864674_173864705_173865228_173865283_173865509_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990
transcript_172023.known	chr6	+	6651	3	FSM	ENSG00000112208.11	ENST00000370693.5	6651	3	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_2	11.5	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAATGGTTTTATAAGTG	57170801	True	NA	NA	False	AATAAA	-16	NA	57172325	57189833	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_57172811_57182031_57182142_57183777
transcript_172027.known	chr6	+	2561	16	FSM	ENSG00000146143.19	ENST00000672107.1	2561	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	62.3397144683868	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGACAGTGTCTGCGTATA	57314313	True	NA	12	True	AATAAA	-13	NA	57317629	57646850	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_57317702_57318436_57318600_57320456_57320561_57324200_57324281_57325924_57326046_57379900_57379997_57382030_57382169_57398004_57398123_57402128_57402269_57507386_57507455_57532410_57532484_57537439_57537626_57601092_57601220_57606374_57606458_57632132_57632202_57645927
transcript_17203.known	chr1	-	565	11	ISM	ENSG00000234741.9	ENST00000451607.5	1007	12	686	-133	2	0	3prime_fragment	FALSE	canonical	3	2064	junction_5	503.330001092722	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	-173867032	False	62556	-37	True	AATAAA	-14	NA	173867043	173863900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865228_173865283_173865509_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990
transcript_172031.known	chr6	+	2303	14	FSM	ENSG00000146143.19	ENST00000615550.5	2303	14	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_8	23.5193487008805	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGACAGTGTCTGCGTATA	57314313	True	NA	12	True	AATAAA	-13	NA	57317629	57646850	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_57317702_57318436_57318600_57320456_57320561_57324200_57324281_57325924_57326046_57379900_57379997_57382030_57382169_57507386_57507455_57532410_57532484_57537439_57537626_57601092_57601220_57606374_57606458_57632132_57632202_57645927
transcript_172035.known	chr6	+	2197	7	FSM	ENSG00000146143.19	ENST00000419977.4	2197	7	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_3	9.67815409397198	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGCATGTGGGATGAAG	57314311	True	NA	NA	False	AAAAAG	-27	NA	57317627	57383589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_57317702_57318436_57318600_57320456_57320561_57324200_57324281_57325924_57326046_57379900_57379997_57382030
transcript_172036.known	chr6	+	864	5	FSM	ENSG00000146143.19	ENST00000274891.10	864	5	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_3	2.8613807855649	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACAAGTGGTAGTTTCTT	57314307	True	NA	NA	False	AATAAA	-19	NA	57317623	57326363	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_57317702_57318436_57318600_57320456_57320561_57324200_57324281_57325924
transcript_172037.known	chr6	+	1266	6	FSM	ENSG00000146143.19	ENST00000671770.1	1266	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	54.7598392985224	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTGTCCTGTTATTTA	57314313	True	NA	NA	False	AATAAA	-17	NA	57317629	57378976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_57317702_57318436_57318600_57320456_57320561_57324200_57324281_57325924_57326046_57378250
transcript_172039.known	chr6	-	1666	6	FSM	ENSG00000215190.9	ENST00000418368.1	1666	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	8.95767827062348	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTACTTTGTCTTTCTC	-57960763	True	NA	-5	True	AATAAA	-20	NA	57961380	57946077	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_57947178_57948872_57949069_57949858_57950012_57959027_57959112_57961151_57961225_57961320
transcript_17204.known	chr1	-	643	3	FSM	ENSG00000234741.9	ENST00000422207.5	643	3	0	0	0	0	multi-exon	FALSE	canonical	3	3349	junction_1	116	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTGGAGTGTGTAGTGT	-173864895	False	NA	-40	True	AATAAA	-11	NA	173864906	173863903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_173864076_173864256_173864305_173864483
transcript_172041.known	chr6	-	1088	5	FSM	ENSG00000215190.9	ENST00000418765.6	1088	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	8.95823643358446	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGACAAGCCTGCCCTCTC	-57960807	True	NA	NA	False	NA	NA	NA	57961424	57946546	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_57947178_57948872_57949069_57959027_57959112_57961151_57961225_57961320
transcript_172042.known	chr6	-	181	3	FSM	ENSG00000215190.9	ENST00000635948.1	181	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAGAAGTTCAGATATTT	-57960728	True	NA	NA	False	AAAACA	-4	NA	57961345	57959028	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_57959112_57961151_57961225_57961320
transcript_172044.known	chr6	+	4628	6	FSM	ENSG00000285976.2	ENST00000370651.7	4628	6	0	0	0	0	multi-exon	FALSE	canonical	3	643	junction_4	46.2540809010405	384	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATGATTTTATTTTCAG	63564065	True	NA	6	True	AATAAA	-17	NA	63572471	63583587	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_63572720_63576435_63576986_63578436_63578530_63578897_63579029_63579256_63579332_63580056
transcript_172045.known	chr6	+	18797	16	FSM	ENSG00000118482.12	ENST00000262043.8	18797	16	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	30.2268460515189	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATACTTTATTTCATAT	63632931	True	NA	NA	False	ATTAAA	-15	NA	63635801	63726011	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_63636151_63646526_63646796_63679999_63680162_63684128_63685912_63691736_63692044_63694580_63694765_63698222_63698368_63698448_63698606_63700349_63700467_63702507_63702640_63703535_63703672_63706028_63706225_63706728_63706877_63709150_63709241_63711166_63711363_63711585
transcript_17205.known	chr1	-	772	10	ISM	ENSG00000234741.9	ENST00000436285.6	805	11	948	1	2	0	3prime_fragment	FALSE	canonical	3	2175	junction_4	495.804621017415	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	-173867032	False	62556	-37	True	AATAAA	-14	NA	173867043	173863900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_173864076_173864256_173864305_173864483_173864705_173865228_173865283_173865470_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990
transcript_172053.nic	chr6	+	3052	6	ISM	ENSG00000118482.12	ENST00000262043.8	18797	16	-72	31321	-72	0	5prime_fragment	FALSE	canonical	3	37	junction_2	25.4275441205005	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAGAAAAAAGTGAAAAAA	63635719	False	NA	NA	False	NA	NA	NA	63635729	63694690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_63636151_63646526_63646796_63679999_63680162_63684128_63685912_63691736_63692044_63694580
transcript_172054.known	chr6	+	2854	6	FSM	ENSG00000118482.12	ENST00000494284.6	2854	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	36.4505143996625	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAGAAAAAAGTGAAAAAA	63632965	True	NA	NA	False	NA	NA	NA	63635835	63694690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_63636151_63646618_63646796_63679999_63680162_63684128_63685912_63691736_63692044_63694580
transcript_172059.nic	chr6	+	2778	5	ISM	ENSG00000118482.12	ENST00000481385.6	2787	6	-88	3555	-67	0	5prime_fragment	FALSE	canonical	3	44	junction_1	22.466641938661	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAGAAAAAAGTGAAAAAA	63635724	False	NA	NA	False	NA	NA	NA	63635734	63694690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_63636151_63679999_63680162_63684128_63685912_63691736_63692044_63694580
transcript_172064.nic	chr6	+	2353	4	ISM	ENSG00000118482.12	ENST00000262043.8	18797	16	16	40294	-2	-607	5prime_fragment	FALSE	canonical	3	37	junction_2	21.2968437932844	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGAGAAGAACCTACAACC	63632947	True	NA	NA	False	GATAAA	-16	NA	63635817	63685717	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_63636151_63646526_63646796_63679999_63680162_63684128
transcript_172067.nic	chr6	+	901	3	ISM	ENSG00000118482.12	ENST00000481385.6	2787	6	-8	13714	-5	286	5prime_fragment	FALSE	canonical	3	44	junction_1	21	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGCTTTGATGGAATGTA	63632944	True	NA	NA	False	AAGAAA	-3	NA	63635814	63684531	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_63636151_63679999_63680162_63684128
transcript_17207.known	chr1	-	11451	20	FSM	ENSG00000135870.12	ENST00000367696.7	11451	20	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_3	3.86044648860889	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGGAGTAGCCAATTTT	-174018749	True	NA	1	True	AATAAA	-30	NA	174022357	173931083	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_173938872_173941264_173941381_173943441_173943616_173946475_173946609_173946745_173946837_173947368_173947583_173951985_173952139_173961076_173961245_173961724_173962096_173963972_173964188_173964838_173965121_173970504_173970618_173972508_173972628_173978487_173978621_173980808_173981010_173982726_173982903_173983417_173983658_173984498_173984620_173992754_173993136_174022095
transcript_172070.known	chr6	-	3900	16	FSM	ENSG00000168216.13	ENST00000649934.3	3900	16	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_5	28.4498779532629	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTCTGTGGCATTTTGT	-69794745	True	NA	NA	False	AATAAA	-19	NA	69797010	69674009	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_69676272_69676449_69676542_69697562_69697642_69699042_69699193_69700764_69700870_69701442_69701546_69701888_69701954_69713644_69713798_69718955_69719082_69737941_69738016_69741788_69741878_69749340_69749409_69752258_69752357_69780493_69780555_69790295_69790473_69796812
transcript_172078.known	chr6	-	2957	33	FSM	ENSG00000112280.18	ENST00000683980.1	2957	33	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_14	21.7539507906035	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTAAACATTACTTAACTA	-70282184	True	NA	-30	True	TATAAA	-44	NA	70283105	70216059	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_70217082_70225931_70226010_70232582_70232772_70234538_70234594_70234793_70234941_70239253_70239287_70240688_70240734_70241418_70241455_70241963_70242036_70242661_70242716_70252119_70252174_70252261_70252316_70253384_70253430_70254475_70254530_70254739_70254770_70254962_70255017_70255149_70255204_70255336_70255391_70256767_70256822_70260656_70260711_70263243_70263298_70266716_70266771_70268803_70268861_70269632_70269666_70270313_70270368_70271654_70271709_70272064_70272089_70274046_70274083_70274718_70274773_70280811_70280875_70281003_70281040_70281389_70281465_70282980
transcript_172081.known	chr6	-	2548	33	FSM	ENSG00000112280.18	ENST00000644493.1	2548	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_29	22.3508729905008	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAGAGTCATCAGTTAAAA	-70282324	True	NA	NA	False	NA	NA	NA	70283245	70216683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_70217082_70225931_70226010_70232582_70232772_70234538_70234594_70234793_70234941_70239253_70239287_70240688_70240734_70241418_70241455_70241963_70242036_70242661_70242716_70252119_70252174_70252261_70252316_70253384_70253430_70254475_70254530_70254962_70255017_70255149_70255204_70255336_70255391_70256767_70256822_70260656_70260711_70263243_70263298_70266716_70266771_70268803_70268861_70269632_70269666_70270313_70270368_70271654_70271709_70272064_70272089_70274046_70274083_70274718_70274773_70279515_70279621_70280811_70280875_70281003_70281040_70281389_70281465_70282980
transcript_172084.known	chr6	-	3051	32	FSM	ENSG00000112280.18	ENST00000320755.12	3051	32	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_14	10.5700182667888	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTCTATAGGTGTATGT	-70282288	True	NA	-10	True	ATTAAA	-14	NA	70283209	70216039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_70217082_70225931_70226010_70232582_70232772_70234538_70234594_70234793_70234941_70239253_70239287_70240688_70240734_70241418_70241455_70241963_70242036_70242661_70242716_70252119_70252174_70252261_70252316_70253384_70253430_70254475_70254530_70254962_70255017_70255149_70255204_70255336_70255391_70256767_70256822_70260656_70260711_70263243_70263298_70266716_70266771_70268803_70268861_70269632_70269666_70270313_70270368_70271654_70271709_70272064_70272089_70274046_70274083_70274718_70274773_70280811_70280875_70281003_70281040_70281389_70281465_70282980
transcript_172087.known	chr6	-	2849	32	FSM	ENSG00000112280.18	ENST00000684176.1	2849	32	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_31	17.6078215521596	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACCAAAGAAGAAATAAATAT	-70282119	False	NA	-34	True	TTTAAA	-26	NA	70283040	70216155	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_70217082_70225931_70226010_70232582_70232772_70234538_70234594_70234793_70234941_70239253_70239287_70240688_70240734_70241418_70241455_70241963_70242036_70242661_70242716_70252119_70252174_70252261_70252316_70253384_70253430_70254475_70254530_70254962_70255017_70255149_70255204_70255336_70255391_70256767_70256822_70260656_70260711_70263243_70263298_70266716_70266771_70268803_70268861_70269632_70269666_70270313_70270368_70271654_70271709_70272064_70272089_70274046_70274083_70274718_70274773_70280811_70280875_70281003_70281040_70281389_70281465_70282897
transcript_1721.known	chr1	-	3088	5	FSM	ENSG00000227372.12	ENST00000648600.1	3088	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	70.3824374400319	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGAAAGCACTCACATTT	-3741086	False	NA	-10	True	TTTAAA	-25	NA	3746884	3737142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3738514_3740232_3740388_3742803_3742958_3743060_3743191_3745606
transcript_172106.known	chr6	+	5042	22	FSM	ENSG00000082269.17	ENST00000361499.7	5042	22	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_10	33.0662771537295	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAATTTTTGCTAAATTG	70407512	False	NA	NA	False	GATAAA	-39	NA	70413577	70560659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_70413703_70415290_70415377_70426438_70426533_70428303_70428420_70452491_70452572_70475409_70475550_70475662_70475734_70477158_70477333_70480900_70481028_70482000_70482155_70491033_70491084_70502635_70502792_70522512_70522587_70523966_70524122_70524930_70526699_70528291_70528453_70533159_70533252_70533756_70533855_70536259_70536412_70538290_70538402_70556749_70556864_70559715
transcript_172116.nic	chr6	+	2133	10	ISM	ENSG00000082269.17	ENST00000361499.7	5042	22	-155	77694	2	-21995	5prime_fragment	FALSE	canonical	3	89	junction_2	23.7445250349592	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGAATCTGTATTCTT	70407357	True	NA	NA	False	AATAAA	-21	NA	70413422	70482965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_70413703_70415290_70415377_70426438_70426533_70428303_70428420_70452491_70452572_70475409_70475550_70475662_70475734_70477158_70477333_70480900_70481028_70482000
transcript_172130.nnic	chr6	+	742	4	NNC	ENSG00000154079.6	novel	1183	3	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	89.7935904666301	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTGTTGCTGCGTGCT	70562182	True	NA	15	True	AATAAA	-16	NA	70566903	70589569	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_70567005_70579413_70579567_70588614_70588859_70589325
transcript_172132.nnic	chr6	+	885	4	NNC	ENSG00000154079.6	novel	1183	3	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	89.7935904666301	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTGTTGCTGCGTGCT	70562182	True	NA	15	True	AATAAA	-16	NA	70566903	70589569	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_70567005_70579413_70579567_70588614_70588961_70589284
transcript_172134.nnic	chr6	+	911	4	NNC	ENSG00000154079.6	novel	1183	3	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	89.7935904666301	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTGTTGCTGCGTGCT	70562182	True	NA	15	True	AATAAA	-16	NA	70566903	70589569	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_70567005_70579413_70579567_70588614_70588987_70589284
transcript_172135.known	chr6	+	1183	3	FSM	ENSG00000154079.6	ENST00000370474.4	1183	3	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_2	29.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTGTTGCTGCGTGCT	70562208	True	NA	15	True	AATAAA	-16	NA	70566929	70589569	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_70567005_70579413_70579567_70588614
transcript_172138.known	chr6	+	3214	11	FSM	ENSG00000112305.15	ENST00000370455.8	3214	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	90.224664033733	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACTTTAAAATCCTGGTG	70664327	True	NA	2	True	AATAAA	-10	NA	70667882	70862003	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_70668142_70732377_70732512_70754979_70755066_70773349_70773426_70791688_70791770_70798656_70798738_70836940_70837029_70852539_70852665_70856858_70857031_70857921_70858230_70860199
transcript_172139.known	chr6	+	2403	10	FSM	ENSG00000112305.15	ENST00000316999.9	2403	10	0	0	0	0	multi-exon	TRUE	canonical	3	178	junction_8	33.996731869075	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTTCATTTGTGGGTTT	70664220	True	NA	14	True	ATTAAA	-14	NA	70667775	70861166	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_70668142_70732377_70732512_70754979_70755066_70773349_70773426_70798656_70798738_70836940_70837029_70852539_70852665_70856858_70857031_70857921_70858230_70860199
transcript_172144.nic	chr6	+	795	4	ISM	ENSG00000112305.15	ENST00000370452.7	2491	11	-133	87741	-133	-18344	5prime_fragment	FALSE	canonical	3	249	junction_1	13.9283882771841	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAAAACCTTCATCTC	NA	False	NA	NA	False	GATAAA	-22	NA	70667642	70773425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_70668142_70732377_70732512_70754979_70755066_70773349
transcript_172145.known	chr6	+	8492	7	FSM	ENSG00000119900.9	ENST00000370435.5	8492	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	9.94428926011753	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGAAGTTATTTTTATT	71288115	True	NA	NA	False	AATAAA	-22	NA	71288810	71309059	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_71289171_71293292_71293380_71293532_71293612_71296316_71296396_71296494_71296562_71296671_71296818_71301385
transcript_172151.known	chr6	-	1430	5	FSM	ENSG00000135314.13	ENST00000370384.7	1430	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	9.75640815054393	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCGATGTACTGTCCTT	-73310200	False	NA	-3	True	AATAAA	-22	NA	73310215	73241313	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_73241729_73242054_73242238_73242405_73242531_73291997_73292041_73309551
transcript_172155.known	chr6	-	2053	3	FSM	ENSG00000135314.13	ENST00000484801.5	2053	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	8.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAGTGGCTATTATTGTC	-73309216	True	NA	NA	False	AATAAA	-12	NA	73310143	73274138	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_73275557_73291997_73292041_73309551
transcript_172157.known	chr6	+	2403	2	FSM	ENSG00000229852.4	ENST00000441363.1	2403	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTCACTAATGATTTCGA	73263058	False	NA	NA	False	ATTAAA	-22	NA	73263358	73301401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_73263417_73299056
transcript_172159.nic	chr6	-	918	2	ISM	ENSG00000135314.13	ENST00000474593.1	537	5	206	16685	-16	-16685	internal_fragment	FALSE	canonical	3	45	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAATTTTAAATAATTCA	-73309232	True	NA	NA	False	AATAAA	-7	NA	73310159	73291730	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_73292041_73309551
transcript_172160.known	chr6	-	659	3	FSM	ENSG00000203909.4	ENST00000370370.4	659	3	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	2.5	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTCAGTGTGGTTGATGG	-73353355	True	NA	NA	False	AATAAA	-17	NA	73354276	73353062	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_73353379_73353852_73354033_73354113
transcript_172161.known	chr6	+	1037	3	FSM	ENSG00000203908.4	ENST00000370367.4	1037	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACGTCTGTATTTTGGAA	73362622	True	NA	2	True	AATAAA	-14	NA	73362657	73364171	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_73362899_73363094_73363275_73363555
transcript_172162.known	chr6	-	1595	6	FSM	ENSG00000164430.17	ENST00000680833.1	1595	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	11.2320968656792	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCACGCCTGGCTGAAAT	-73452170	False	NA	NA	False	NA	NA	NA	73452181	73424167	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_73424431_73425463_73425579_73428708_73428812_73440208_73440446_73445527_73445748_73451524
transcript_172165.known	chr6	-	3201	5	FSM	ENSG00000164430.17	ENST00000370315.4	3201	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	1.92028643696715	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTTTGCTTTATACA	-73451290	True	NA	-15	True	AATAAA	-17	NA	73452297	73423710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_73425579_73428708_73428812_73440208_73440446_73445527_73445748_73451524
transcript_17217.nic	chr1	-	357	2	ISM	ENSG00000135870.12	ENST00000367696.7	11451	20	-38	61995	-38	-12130	5prime_fragment	FALSE	canonical	3	14	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAAACTTTTTTTCAAAGA	-174018787	True	NA	18	True	TTTAAA	-10	NA	174022395	173993078	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_173993136_174022095
transcript_172170.known	chr6	+	3721	13	FSM	ENSG00000135297.17	ENST00000679418.1	3721	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	92.5008633593342	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAGACTGTTTCAAAAAA	73460223	True	NA	NA	False	NA	NA	NA	73461736	73502427	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_73461795_73466208_73466409_73466488_73466607_73471459_73471558_73473364_73473655_73479731_73479845_73479935_73480127_73480674_73480806_73482028_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
transcript_172173.known	chr6	+	2961	13	FSM	ENSG00000135297.17	ENST00000370300.8	2961	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	68.8879928257135	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGAAATTGTCATGGCCA	73460251	True	NA	NA	False	CATAAA	-10	NA	73461764	73501452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_73462072_73466208_73466409_73466488_73466607_73473364_73473655_73479731_73479845_73479935_73480127_73480292_73480368_73480674_73480806_73482039_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
transcript_172174.known	chr6	+	3945	13	FSM	ENSG00000135297.17	ENST00000679627.1	3945	13	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	68.4720137477106	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAGACTGTTTCAAAAAA	73460217	True	NA	NA	False	NA	NA	NA	73461730	73502427	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_73462072_73466208_73466409_73466488_73466607_73473364_73473655_73479731_73479845_73479935_73480127_73480317_73480368_73480674_73480806_73482039_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
transcript_172175.known	chr6	+	4049	13	FSM	ENSG00000135297.17	ENST00000681094.1	4049	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	79.7758578769292	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAGACTGTTTCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73461692	73502427	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_73462072_73466208_73466409_73466488_73466607_73473364_73473655_73479731_73479845_73479935_73480127_73480674_73480806_73481000_73481117_73482039_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
transcript_172176.known	chr6	+	3629	12	FSM	ENSG00000135297.17	ENST00000681509.1	3629	12	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	73.069196232178	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAGACTGTTTCAAAAAA	73460217	True	NA	NA	False	NA	NA	NA	73461730	73502427	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_73461795_73466208_73466409_73466488_73466607_73473364_73473655_73479731_73479845_73479935_73480127_73480674_73480806_73482028_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
transcript_172180.known	chr6	+	3884	12	FSM	ENSG00000135297.17	ENST00000681624.1	3884	12	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	60.4194703443701	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAGACTGTTTCAAAAAA	73460223	True	NA	NA	False	NA	NA	NA	73461736	73502427	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_73462072_73466213_73466409_73466488_73466607_73473364_73473655_73479731_73479845_73479935_73480127_73480674_73480806_73482039_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
transcript_172182.known	chr6	+	4047	12	FSM	ENSG00000135297.17	ENST00000681212.1	4047	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	85.5398027308905	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAGACTGTTTCAAAAAA	73460217	True	NA	NA	False	NA	NA	NA	73461730	73502427	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_73462072_73466208_73466409_73466488_73466607_73473364_73473655_73479731_73479845_73479935_73480368_73480674_73480806_73481000_73481117_73482448_73482621_73492233_73492353_73497735_73497897_73500573
transcript_172183.known	chr6	+	4136	12	FSM	ENSG00000135297.17	ENST00000681284.1	4136	12	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_6	47.2401985986126	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAGACTGTTTCAAAAAA	73460217	True	NA	NA	False	NA	NA	NA	73461730	73502427	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_73462072_73466208_73466409_73466488_73466607_73473364_73473655_73479731_73479845_73479935_73480368_73480674_73480806_73482039_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
transcript_172185.known	chr6	+	3328	11	FSM	ENSG00000135297.17	ENST00000680609.1	3328	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	76.4950325184583	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAGACTGTTTCAAAAAA	73460217	True	NA	NA	False	NA	NA	NA	73461730	73502427	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_73461795_73466208_73466409_73466488_73466607_73479731_73479845_73479935_73480127_73480674_73480806_73482039_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
transcript_172186.known	chr6	+	2685	11	FSM	ENSG00000135297.17	ENST00000681705.1	2685	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	80.5722656998052	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGATGGATACTTATTTG	73460217	True	NA	NA	False	TATAAA	-43	NA	73461730	73501367	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_73462072_73466208_73466409_73466488_73466607_73473364_73473655_73479731_73479845_73479935_73480127_73480674_73480806_73482028_73482245_73482448_73482621_73492233_73492353_73500573
transcript_172188.known	chr6	+	2240	11	FSM	ENSG00000135297.17	ENST00000415228.5	2240	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	62.9081870665496	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGTGTTTTGAGAGTTAATA	73460251	True	NA	7	True	ATTAAA	-15	NA	73461764	73501096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_73462072_73466208_73466409_73466488_73466607_73479731_73479845_73479935_73480127_73480674_73480806_73482039_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
transcript_172192.known	chr6	-	1778	8	FSM	ENSG00000156508.19	ENST00000678508.1	1778	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	7798.01575493957	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTTCCTTTGGTCA	-73520069	False	NA	-1	True	ATTAAA	-17	NA	73520214	73517514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73520150
transcript_172194.known	chr6	-	3694	8	FSM	ENSG00000156508.19	ENST00000615060.5	3694	8	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_7	7701.15345190549	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTAAGCTTTAAGATGA	-73520446	False	NA	-19	True	AATAAA	-3	NA	73520591	73515764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73520361
transcript_172195.known	chr6	-	1790	8	FSM	ENSG00000156508.19	ENST00000676710.1	1790	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_7	7801.33535926735	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTTCCTTTGGTCA	-73520840	False	NA	-1	True	ATTAAA	-17	NA	73520985	73517514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73520909
transcript_172196.known	chr6	-	2048	8	FSM	ENSG00000156508.19	ENST00000331523.7	2048	8	0	0	0	0	multi-exon	FALSE	canonical	3	610	junction_7	7601.45137860031	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTTCCTTTGGTCA	-73521695	False	NA	-1	True	ATTAAA	-17	NA	73521840	73517514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73521506
transcript_172197.known	chr6	-	2079	8	FSM	ENSG00000156508.19	ENST00000455918.2	2079	8	0	0	0	0	multi-exon	FALSE	canonical	2	198	junction_7	7737.9582842093	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACCTGTGTGTTCCTTTG	-73523670	True	NA	-5	True	ATTAAA	-13	NA	73523815	73517518	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73523446
transcript_172202.known	chr6	-	1731	8	FSM	ENSG00000156508.19	ENST00000678703.1	1731	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	7983.23340712603	18778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAAACCTGTGTGTTCCT	-73503429	True	NA	-8	True	ATTAAA	-10	NA	73521032	73517521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519508_73519882_73520057_73520999
transcript_172203.known	chr6	-	1842	7	FSM	ENSG00000156508.19	ENST00000678515.1	1842	7	0	0	0	0	multi-exon	FALSE	canonical	3	13372	junction_6	3343.83933110163	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTTCCTTTGGTCA	-73503429	True	NA	-1	True	ATTAAA	-17	NA	73521032	73517514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73520999
transcript_172204.known	chr6	-	1825	7	FSM	ENSG00000156508.19	ENST00000488500.2	1825	7	0	0	0	0	multi-exon	FALSE	canonical	3	13372	junction_6	3959.88425756781	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACCTGTGTGTTCCTTTG	-73503428	True	NA	-5	True	ATTAAA	-13	NA	73521031	73517518	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73519229_73519336_73519517_73519882_73520057_73520999
transcript_172205.known	chr6	-	2109	7	FSM	ENSG00000156508.19	ENST00000491404.2	2109	7	0	0	0	0	multi-exon	FALSE	canonical	3	13372	junction_6	3818.71184287174	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACCTGTGTGTTCCTTTG	-73503429	True	NA	-5	True	ATTAAA	-13	NA	73521032	73517518	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73520057_73520999
transcript_172207.known	chr6	-	3292	11	FSM	ENSG00000119899.13	ENST00000355773.6	3292	11	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	13.3626344707921	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGGATCTGACAGTTCT	-73652905	True	NA	-12	True	AATAAA	-15	NA	73653992	73593378	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_73595215_73600350_73600442_73610399_73610548_73615314_73615448_73621803_73621963_73635381_73635501_73636620_73636708_73638411_73638500_73641690_73641925_73644406_73644604_73653792
transcript_172217.nnic	chr6	-	1120	7	NNC	ENSG00000119899.13	novel	734	5	NA	NA	-55	12556	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	28.4004107951511	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAGGACCTTCCAATCTC	-73652960	True	NA	-7	True	AATAAA	-25	NA	73654047	73622676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_73622817_73635381_73635501_73636620_73636708_73638411_73638500_73641690_73641925_73644406_73644604_73653792
transcript_17222.known	chr1	+	8634	26	FSM	ENSG00000152061.24	ENST00000681986.1	8634	26	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_17	77.4606997128221	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGTCTTTTTTATTTTT	174158211	True	NA	19	True	AATAAA	-19	NA	174159519	174995308	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_174159658_174219124_174219296_174220971_174221165_174231144_174231356_174241482_174241658_174250474_174250633_174252479_174252591_174272413_174272481_174275832_174275936_174278612_174278780_174304985_174305128_174370978_174371073_174393994_174394146_174637374_174637489_174683521_174683597_174699524_174699651_174702112_174702257_174752312_174752355_174811831_174811961_174957456_174957550_174969276_174969388_174976077_174976183_174978806_174978891_174982833_174982906_174988640_174988839_174989848
transcript_172220.known	chr6	+	9031	33	FSM	ENSG00000156535.15	ENST00000287097.6	9031	33	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	6.18647403110205	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTATGTGTTCTTTTTA	73695449	True	NA	6	True	AATAAA	-19	NA	73696202	73828313	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_73696290_73697399_73697573_73723250_73723280_73730343_73730575_73736382_73736509_73756642_73756683_73758943_73759029_73762383_73762481_73762740_73762883_73763575_73763686_73765929_73766155_73766758_73766861_73766947_73767011_73768054_73768232_73771428_73771582_73780423_73780499_73781258_73781320_73782613_73782756_73783706_73783825_73785363_73785478_73787233_73787453_73788467_73788613_73792625_73792803_73803219_73803302_73806843_73807073_73808082_73808249_73809983_73810175_73810991_73811148_73812204_73812271_73814980_73815124_73818387_73818536_73820460_73820564_73823457
transcript_172225.known	chr6	-	486	4	FSM	ENSG00000112695.13	ENST00000509698.6	486	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	3274.23276848519	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTCTGATTTTATCACT	-75205787	True	NA	-15	True	AATAAA	-16	NA	75243801	75237786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_75237989_75240276_75240386_75241175_75241266_75243716
transcript_172226.known	chr6	-	501	4	FSM	ENSG00000112695.13	ENST00000459637.2	501	4	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_2	3012.52728894971	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTCTGATTTTATCACT	-75205773	True	NA	-15	True	AATAAA	-16	NA	75243787	75237786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_75237989_75240300_75240386_75241122_75241266_75243716
transcript_172227.known	chr6	-	773	4	FSM	ENSG00000112695.13	ENST00000370089.6	773	4	0	0	0	0	multi-exon	FALSE	canonical	3	6251	junction_3	508.389832925701	1719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAGCAACATTATTGTGA	NA	False	NA	-13	True	ACTAAA	-5	NA	75244009	75237683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_75237989_75240300_75240386_75241175_75241266_75243716
transcript_172230.known	chr6	-	325	3	FSM	ENSG00000112695.13	ENST00000472311.6	325	3	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_1	2978	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGTAACTGCCACCAATAA	-75205771	True	NA	-51	True	GATAAA	-40	NA	75243785	75237822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_75237989_75241175_75241266_75243716
transcript_172231.known	chr6	-	4418	7	FSM	ENSG00000112697.17	ENST00000230461.11	4418	7	0	0	0	0	multi-exon	TRUE	canonical	3	712	junction_6	64.6411031946564	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGACCGTGGTGGCCTTAT	-75272647	True	NA	NA	False	AATAAA	-20	NA	75284792	75252923	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_75256296_75258779_75258987_75259346_75259491_75260823_75260912_75265230_75265339_75267640_75267749_75284401
transcript_172235.known	chr6	-	2791	6	FSM	ENSG00000112697.17	ENST00000475111.6	2791	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	323.797714630601	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAAACAATGTAATGGTT	NA	False	NA	NA	False	AATATA	-17	NA	75284948	75254598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_75256296_75258779_75258987_75259346_75259491_75260823_75260912_75265230_75265339_75284401
transcript_172238.known	chr6	-	3764	3	FSM	ENSG00000118407.15	ENST00000498523.1	3764	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	6	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGAACAGAGTTTTACTT	-75334655	True	NA	-2	True	AATAAA	-22	NA	75334790	75308087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_75308898_75312396_75315203_75334642
transcript_172244.known	chr6	+	6671	24	FSM	ENSG00000112701.18	ENST00000447266.7	6671	24	0	0	0	0	multi-exon	FALSE	canonical	2	173	junction_5	81.167543589326	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACCAAGAGTTTGGTGG	75598343	True	NA	NA	False	AATAAA	-21	NA	75601879	75718281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_75602577_75621531_75621626_75623899_75623961_75633580_75633727_75634706_75634812_75640683_75640705_75647730_75647802_75659261_75659408_75663220_75663519_75666711_75666942_75670552_75670721_75675434_75675469_75675859_75676055_75677029_75677257_75678582_75678693_75678810_75678928_75695803_75695924_75697424_75697518_75702644_75703073_75709526_75709631_75711327_75711417_75713512_75713582_75713674_75713826_75715384
transcript_172247.known	chr6	+	4644	23	FSM	ENSG00000112701.18	ENST00000370010.6	4644	23	0	0	0	0	multi-exon	TRUE	canonical	2	63	junction_5	98.293339441248	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATGATTAATTTGATAT	NA	False	NA	16	True	AATAAA	-19	NA	75601508	75715904	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_75602577_75621531_75621626_75623899_75623961_75633580_75633727_75634706_75634812_75647730_75647802_75659261_75659408_75663220_75663519_75666711_75666942_75670552_75670721_75675434_75675469_75675859_75676055_75677029_75677257_75678582_75678693_75678810_75678928_75695803_75695924_75697424_75697518_75702644_75703073_75709526_75709631_75711327_75711417_75713512_75713582_75713674_75713826_75715384
transcript_172263.nic	chr6	+	3589	16	NIC	ENSG00000112701.18	novel	6671	24	NA	NA	-13	-81	combination_of_known_junctions	FALSE	canonical	2	215	junction_5	92.0091782861302	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTATGCATAGTTCTCTG	75598330	True	NA	-1	True	AATAAA	-14	NA	75601866	75679786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_75602577_75621531_75621626_75623899_75623961_75633580_75633727_75634706_75634812_75640686_75640705_75647730_75647802_75659261_75659408_75663220_75663519_75666711_75666942_75670552_75670721_75675434_75675469_75675859_75676055_75677029_75677257_75678582_75678693_75678810
transcript_172266.known	chr6	+	2700	15	FSM	ENSG00000112701.18	ENST00000327284.12	2700	15	0	0	0	0	multi-exon	FALSE	canonical	2	63	junction_5	120.378823820844	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTTATGTCTTTGTTTT	75601768	True	NA	7	True	ATTAAA	-17	NA	75601926	75678975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_75602577_75621531_75621626_75623899_75623961_75633580_75633727_75634706_75634812_75647730_75647802_75659261_75659408_75663220_75663519_75666711_75666942_75670552_75670721_75675434_75675469_75675859_75676055_75677029_75677257_75678582_75678693_75678810
transcript_172276.known	chr6	+	867	6	FSM	ENSG00000112701.18	ENST00000493959.6	867	6	0	0	0	0	multi-exon	FALSE	canonical	2	73	junction_2	124.0928684494	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAATTCTAATTGTCTT	75602190	False	NA	NA	False	AGTAAA	-16	NA	75602223	75634811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_75602577_75621531_75621626_75622750_75622859_75623899_75623961_75633580_75633727_75634706
transcript_172278.nic	chr6	+	1146	6	ISM	ENSG00000112701.18	ENST00000447266.7	6671	24	-23	77578	-23	5647	5prime_fragment	FALSE	canonical	2	173	junction_5	72.4265144819216	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAAGCTTAATATTGAAGA	75598320	True	NA	NA	False	AAGAAA	-1	NA	75601856	75640703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_75602577_75621531_75621626_75623899_75623961_75633580_75633727_75634706_75634812_75640683
transcript_17228.nic	chr1	+	1526	9	NIC	ENSG00000152061.24	novel	6282	8	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	3	167	junction_8	32.2335229225724	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAACCTAAACATCTTAA	174870643	True	NA	NA	False	NA	NA	NA	174874418	174990409	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_174874507_174877391_174877606_174957456_174957550_174969276_174969388_174976077_174976183_174978806_174978891_174982833_174982906_174988640_174988839_174989848
transcript_172286.known	chr6	+	5598	32	FSM	ENSG00000196586.17	ENST00000369975.6	5598	32	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_13	21.4709832506147	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTCGCCTTTAACTGGT	75744511	True	NA	NA	False	AGTAAA	-21	NA	75749234	75916612	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_75749424_75817500_75817665_75822781_75822852_75828539_75828614_75830415_75830546_75832841_75832948_75835900_75835957_75840584_75840683_75841213_75841379_75844896_75844978_75848350_75848532_75855138_75855284_75857096_75857255_75858901_75858994_75861022_75861096_75862595_75862724_75866525_75866622_75866931_75867106_75870646_75870686_75873206_75873301_75879819_75879951_75880042_75880121_75881688_75881819_75886003_75886095_75886843_75886995_75890056_75890266_75891227_75891307_75892529_75892691_75907604_75907709_75908495_75908628_75914062_75914282_75914812
transcript_172288.known	chr6	+	3122	28	FSM	ENSG00000196586.17	ENST00000627432.3	3122	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	50.8104684460171	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGGAAGCAAAGAGAAAACAA	75744512	True	NA	5	True	NA	NA	NA	75749235	75891238	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_75749424_75817500_75817665_75822781_75822852_75828539_75828614_75830415_75830546_75832841_75832948_75835900_75835957_75840584_75840683_75841213_75841379_75844896_75844978_75846967_75846977_75848350_75848532_75855138_75855284_75857096_75857255_75858901_75858994_75861022_75861096_75862595_75862724_75866525_75866622_75866931_75867106_75870646_75870686_75873206_75873301_75879819_75879951_75880042_75880121_75881688_75881819_75886003_75886095_75886843_75886995_75890056_75890266_75891227
transcript_172291.nic	chr6	+	3034	27	ISM	ENSG00000196586.17	ENST00000627432.3	3122	28	-64	1114	-29	0	5prime_fragment	FALSE	canonical	0	0	junction_10	51.6485763965183	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCAGTGCATTACAGAAAA	75749151	True	NA	NA	False	NA	NA	NA	75749171	75890124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_75749424_75817500_75817665_75822781_75822852_75828539_75828614_75830415_75830546_75832841_75832948_75835900_75835957_75840584_75840683_75841213_75841379_75844896_75844978_75846967_75846977_75848350_75848532_75855138_75855284_75857096_75857255_75858901_75858994_75861022_75861096_75862595_75862724_75866525_75866622_75866931_75867106_75870646_75870686_75873206_75873301_75879819_75879951_75880042_75880121_75881688_75881819_75886003_75886095_75886843_75886995_75890056
transcript_172292.nic	chr6	+	3201	27	ISM	ENSG00000196586.17	ENST00000627432.3	3122	28	-173	1056	-138	0	5prime_fragment	FALSE	canonical	0	0	junction_10	51.6485763965183	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTCAAGAAGAAATGGAAAA	75749024	False	NA	-54	True	AAAACA	-32	NA	75749062	75890182	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_75749424_75817500_75817665_75822781_75822852_75828539_75828614_75830415_75830546_75832841_75832948_75835900_75835957_75840584_75840683_75841213_75841379_75844896_75844978_75846967_75846977_75848350_75848532_75855138_75855284_75857096_75857255_75858901_75858994_75861022_75861096_75862595_75862724_75866525_75866622_75866931_75867106_75870646_75870686_75873206_75873301_75879819_75879951_75880042_75880121_75881688_75881819_75886003_75886095_75886843_75886995_75890056
transcript_172293.nic	chr6	+	3176	27	ISM	ENSG00000196586.17	ENST00000627432.3	3122	28	-65	973	-30	83	5prime_fragment	FALSE	canonical	0	0	junction_10	51.6485763965183	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGCATTTATATTATTT	75749152	False	NA	29	True	AAGAAA	-22	NA	75749170	75890265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_75749424_75817500_75817665_75822781_75822852_75828539_75828614_75830415_75830546_75832841_75832948_75835900_75835957_75840584_75840683_75841213_75841379_75844896_75844978_75846967_75846977_75848350_75848532_75855138_75855284_75857096_75857255_75858901_75858994_75861022_75861096_75862595_75862724_75866525_75866622_75866931_75867106_75870646_75870686_75873206_75873301_75879819_75879951_75880042_75880121_75881688_75881819_75886003_75886095_75886843_75886995_75890056
transcript_172295.known	chr6	+	3121	27	FSM	ENSG00000196586.17	ENST00000662603.1	3121	27	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	51.1791290902636	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGCGTATTCAAGAAGAAAT	75744522	True	NA	-60	True	AAAACA	-26	NA	75749245	75890176	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_75749424_75777452_75777571_75817500_75817665_75822781_75822852_75828539_75828614_75830415_75830546_75832841_75832948_75835900_75835957_75840584_75840683_75841213_75841379_75844896_75844978_75848350_75848532_75855138_75855284_75857096_75857255_75858901_75858994_75861022_75861096_75862595_75862724_75866525_75866622_75866931_75867106_75870646_75870686_75873206_75873301_75879819_75879951_75880042_75880121_75881688_75881819_75886003_75886095_75886843_75886995_75890056
transcript_17230.nic	chr1	+	3133	9	NIC	ENSG00000152061.24	novel	6282	8	NA	NA	-97	1365	combination_of_known_junctions	FALSE	canonical	3	167	junction_8	32.2335229225724	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATAGTTCTGTACAGAG	NA	False	NA	5	True	ATTAAA	-22	NA	174874360	174991958	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_174874507_174877391_174877606_174957456_174957550_174969276_174969388_174976077_174976183_174978806_174978891_174982833_174982906_174988640_174988839_174989848
transcript_172300.nic	chr6	+	3052	26	ISM	ENSG00000196586.17	ENST00000369975.6	5598	32	-32	26430	1	0	5prime_fragment	FALSE	canonical	3	141	junction_13	20.4237508797968	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTCAAGAAGAAATGGAAAA	75744479	True	NA	-54	True	AAAACA	-32	NA	75749202	75890182	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_75749424_75817500_75817665_75822781_75822852_75828539_75828614_75830415_75830546_75832841_75832948_75835900_75835957_75840584_75840683_75841213_75841379_75844896_75844978_75848350_75848532_75855138_75855284_75857096_75857255_75858901_75858994_75861022_75861096_75862595_75862724_75866525_75866622_75866931_75867106_75870646_75870686_75873206_75873301_75879819_75879951_75880042_75880121_75881688_75881819_75886003_75886095_75886843_75886995_75890056
transcript_172304.nic	chr6	+	2833	24	ISM	ENSG00000196586.17	ENST00000627432.3	3122	28	-173	9420	-138	-5089	5prime_fragment	FALSE	canonical	0	0	junction_10	54.1387980268849	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTGTTTTCCTTTACAC	75749024	False	NA	24	True	AAGAAA	-32	NA	75749062	75881818	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_75749424_75817500_75817665_75822781_75822852_75828539_75828614_75830415_75830546_75832841_75832948_75835900_75835957_75840584_75840683_75841213_75841379_75844896_75844978_75846967_75846977_75848350_75848532_75855138_75855284_75857096_75857255_75858901_75858994_75861022_75861096_75862595_75862724_75866525_75866622_75866931_75867106_75870646_75870686_75873206_75873301_75879819_75879951_75880042_75880121_75881688
transcript_172308.nic	chr6	+	2149	18	ISM	ENSG00000196586.17	ENST00000663400.1	3140	27	8	23122	4	-19859	5prime_fragment	FALSE	canonical	3	141	junction_13	18.3470955999858	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATACTAAACAAAAAGCAGG	75744485	True	NA	NA	False	NA	NA	NA	75749208	75867048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_75749424_75817500_75817665_75822781_75822852_75828539_75828614_75830415_75830546_75832841_75832948_75835900_75835957_75840584_75840683_75841213_75841379_75844896_75844978_75848350_75848532_75855138_75855284_75857096_75857255_75858901_75858994_75861022_75861096_75862595_75862724_75866525_75866622_75866931
transcript_172314.known	chr6	+	627	2	FSM	ENSG00000280511.1	ENST00000626131.1	627	2	0	0	0	0	multi-exon	FALSE	canonical	3	898	junction_1	0	173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGCTGACTCTCTTTTCGG	76557139	True	NA	-50	True	TATAAA	-21	NA	76561327	76562590	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_76561668_76562303
transcript_172317.nnic	chr6	-	2986	24	NNC	ENSG00000146247.14	novel	11926	40	NA	NA	-33	-42406	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_8	63.3766906278155	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAATGAAGAAAAAGATGG	-79071858	True	NA	NA	False	ATTAAA	-16	NA	79078287	78982951	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_78983118_78985351_78985429_78988208_78988350_78990867_78990986_78997413_78997598_78998253_78998392_79001898_79002125_79003729_79003859_79004372_79004437_79015081_79015217_79015629_79015784_79016543_79016643_79017345_79017387_79017482_79017584_79019088_79019160_79025518_79025620_79025942_79026165_79042842_79043004_79060477_79060577_79060667_79060819_79077447_79077508_79077699_79077730_79077854_79077914_79078028
transcript_172319.nic	chr6	-	2996	23	ISM	ENSG00000146247.14	ENST00000275034.5	11926	40	-42	48468	-42	-42341	5prime_fragment	FALSE	canonical	3	169	junction_14	30.9390563303338	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTGGTTTTTAACATTAC	-79071867	True	NA	NA	False	AAAAAG	-24	NA	79078296	78982886	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_78983118_78985351_78985429_78988208_78988350_78990867_78990986_78997413_78997598_78998253_78998392_79001898_79002125_79003729_79003859_79015081_79015217_79015629_79015784_79016543_79016643_79017345_79017387_79017482_79017584_79019088_79019160_79025518_79025620_79025942_79026165_79042842_79043004_79060477_79060577_79060667_79060819_79077447_79077508_79077699_79077730_79077854_79077914_79078028
transcript_172320.nic	chr6	-	2931	23	ISM	ENSG00000146247.14	ENST00000275034.5	11926	40	-42	48533	-42	-42406	5prime_fragment	FALSE	canonical	3	169	junction_14	30.9390563303338	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAATGAAGAAAAAGATGG	-79071867	True	NA	NA	False	ATTAAA	-16	NA	79078296	78982951	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_78983118_78985351_78985429_78988208_78988350_78990867_78990986_78997413_78997598_78998253_78998392_79001898_79002125_79003729_79003859_79015081_79015217_79015629_79015784_79016543_79016643_79017345_79017387_79017482_79017584_79019088_79019160_79025518_79025620_79025942_79026165_79042842_79043004_79060477_79060577_79060667_79060819_79077447_79077508_79077699_79077730_79077854_79077914_79078028
transcript_172323.nic	chr6	-	2856	23	ISM	ENSG00000146247.14	ENST00000275034.5	11926	40	-42	48608	-42	-42481	5prime_fragment	FALSE	canonical	3	169	junction_14	30.9390563303338	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGAAAGCAGTTCAGATGA	-79071867	True	NA	NA	False	AATAAA	-10	NA	79078296	78983026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_78983118_78985351_78985429_78988208_78988350_78990867_78990986_78997413_78997598_78998253_78998392_79001898_79002125_79003729_79003859_79015081_79015217_79015629_79015784_79016543_79016643_79017345_79017387_79017482_79017584_79019088_79019160_79025518_79025620_79025942_79026165_79042842_79043004_79060477_79060577_79060667_79060819_79077447_79077508_79077699_79077730_79077854_79077914_79078028
transcript_172328.nic	chr6	-	2530	20	ISM	ENSG00000146247.14	ENST00000275034.5	11926	40	-42	56466	-42	-50339	5prime_fragment	FALSE	canonical	3	169	junction_11	27.9402805959137	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCACTGTCTCAAAGGTA	-79071867	True	NA	72	True	AATAAA	-2	NA	79078296	78990884	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_78990986_78997413_78997598_78998253_78998392_79001898_79002125_79003729_79003859_79015081_79015217_79015629_79015784_79016543_79016643_79017345_79017387_79017482_79017584_79019088_79019160_79025518_79025620_79025942_79026165_79042842_79043004_79060477_79060577_79060667_79060819_79077447_79077508_79077699_79077730_79077854_79077914_79078028
transcript_17233.nic	chr1	+	1650	9	NIC	ENSG00000152061.24	novel	6282	8	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	62.1579389539261	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAACCTAAACATCTTAA	174874727	True	NA	NA	False	NA	NA	NA	174875501	174990409	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_174875714_174877391_174877606_174957456_174957550_174969276_174969388_174976077_174976183_174978806_174978891_174982833_174982906_174988640_174988839_174989848
transcript_172330.nic	chr6	-	2722	20	ISM	ENSG00000146247.14	ENST00000275034.5	11926	40	-290	56522	-290	-50395	5prime_fragment	FALSE	canonical	3	169	junction_11	27.9402805959137	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTACAGGTCAGAAGAGA	NA	False	NA	16	True	AATAAA	-1	NA	79078544	78990940	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_78990986_78997413_78997598_78998253_78998392_79001898_79002125_79003729_79003859_79015081_79015217_79015629_79015784_79016543_79016643_79017345_79017387_79017482_79017584_79019088_79019160_79025518_79025620_79025942_79026165_79042842_79043004_79060477_79060577_79060667_79060819_79077447_79077508_79077699_79077730_79077854_79077914_79078028
transcript_172332.known	chr6	+	5577	4	FSM	ENSG00000146243.14	ENST00000369940.7	5577	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	11.8977121983832	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGAATGTAAGTTGGTTC	78866561	True	NA	5	True	AATGAA	-18	NA	78867550	78903102	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_78867892_78885377_78885444_78897828_78897960_78898063
transcript_172340.known	chr6	-	872	6	FSM	ENSG00000118418.14	ENST00000344726.9	872	6	0	0	0	0	multi-exon	FALSE	canonical	3	1912	junction_1	1194.79052557342	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGACTCTTAGTATCTT	-79191886	True	NA	-6	True	AATAAA	-21	NA	79234689	79201244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_79201727_79202275_79202390_79203579_79203631_79208546_79208577_79214971_79215023_79234545
transcript_172343.known	chr6	-	831	6	FSM	ENSG00000118418.14	ENST00000275036.11	831	6	0	0	0	0	multi-exon	FALSE	canonical	3	2963	junction_1	779.148098887497	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGACTCTTAGTATCTT	-79191886	True	NA	-6	True	AATAAA	-21	NA	79234689	79201244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_79201727_79202316_79202390_79203579_79203631_79208546_79208577_79214971_79215023_79234545
transcript_172356.nic	chr6	-	1470	5	NIC	ENSG00000118418.14	novel	1010	7	NA	NA	-3	1	intron_retention	FALSE	canonical	3	4603	junction_3	161.742078631382	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATACCTGACTCTTAGTAT	-79234605	False	NA	-9	True	AATAAA	-18	NA	79234741	79201247	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_79202390_79203579_79203631_79208546_79208577_79214971_79215023_79234545
transcript_172358.nic	chr6	-	871	5	ISM	ENSG00000118418.14	ENST00000344726.9	872	6	-26	576	23	-572	5prime_fragment	FALSE	canonical	3	4603	junction_3	161.742078631382	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCAAAACTGTGTGTGTT	-79191912	True	NA	NA	False	AGTAAA	-25	NA	79234715	79201820	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_79202390_79203579_79203631_79208546_79208577_79214971_79215023_79234545
transcript_172361.known	chr6	+	2946	2	FSM	ENSG00000270362.2	ENST00000604516.2	2965	2	19	0	19	0	multi-exon	FALSE	canonical	2	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAAGCTTGCTTGTTGGAT	79233661	False	NA	NA	False	AATAAA	-16	NA	79233717	79236797	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_79233928_79234061
transcript_172365.known	chr6	-	4564	8	FSM	ENSG00000135338.14	ENST00000369846.9	4564	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	4.16986271980755	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGACTCTTTATTTAAGT	-79536482	True	NA	NA	False	AATAAA	-14	NA	79537430	79484990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_79487867_79489083_79489217_79491587_79491731_79492550_79492648_79493612_79493751_79513211_79513742_79518704_79519086_79537164
transcript_172368.known	chr6	+	4603	4	FSM	ENSG00000198478.8	ENST00000369838.6	4603	4	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	11.4697670227235	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTCTTCTGTCACCTCC	79628711	True	NA	13	True	AATAAA	-16	NA	79631328	79703655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_79631507_79673613_79673800_79696484_79696566_79699497
transcript_172373.known	chr6	-	3013	6	FSM	ENSG00000118402.6	ENST00000369816.5	3013	6	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_2	13.1209755734854	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATTTTTTTTTGTTAAT	-79946259	True	NA	-4	True	AATAAA	-23	NA	79947553	79914813	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_79916884_79919419_79919548_79921624_79921797_79924951_79925033_79926193_79926382_79947179
transcript_172382.known	chr6	+	2966	22	FSM	ENSG00000112742.10	ENST00000369798.7	2966	22	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_3	34.3235901900925	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTTGTAAGGTTGTTTT	79998907	True	NA	25	True	AATAAA	-30	NA	80004648	80042527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_80004714_80005841_80005983_80007808_80008032_80008385_80008493_80010813_80010958_80011433_80011549_80011728_80011802_80011885_80011981_80013278_80013367_80014462_80014587_80022323_80022473_80026377_80026515_80027884_80028012_80031466_80031560_80034984_80035143_80035265_80035418_80036474_80036600_80037966_80038048_80039695_80039873_80040195_80040281_80040605_80040704_80042118
transcript_172387.known	chr6	+	3725	22	FSM	ENSG00000112742.10	ENST00000509894.5	3725	22	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_11	73.3806588171255	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTTGTAAGGTTGTTTT	NA	False	NA	25	True	AATAAA	-30	NA	80003886	80042527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_80004714_80005841_80005983_80007808_80008032_80008385_80008493_80010813_80010958_80011433_80011549_80011728_80011802_80011885_80011981_80013278_80013367_80014462_80014587_80022323_80022473_80026380_80026515_80027884_80028012_80031466_80031560_80034984_80035143_80035265_80035418_80036474_80036600_80037966_80038048_80039695_80039873_80040195_80040281_80040605_80040704_80042118
transcript_17239.known	chr1	+	2899	21	FSM	ENSG00000152061.24	ENST00000251507.8	2899	21	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_17	27.4497723123526	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGTAGTGGTGTTTGTT	174158208	True	NA	14	True	AATAAA	-20	NA	174159516	174958182	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_174159658_174219124_174219296_174220971_174221165_174231144_174231356_174241482_174241658_174250474_174250633_174252479_174252591_174272413_174272481_174275832_174275936_174278612_174278780_174304985_174305128_174370978_174371073_174393994_174394146_174637374_174637489_174683521_174683597_174699524_174699651_174702112_174702257_174752312_174752355_174811831_174811961_174957456_174957550_174957890
transcript_172392.known	chr6	+	1514	11	FSM	ENSG00000083123.15	ENST00000356489.9	1514	11	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_10	48.027179804773	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAATCAAATTGTCTTTG	80100700	True	NA	-13	True	AATAAA	-1	NA	80106646	80346254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_80106890_80127546_80127625_80129160_80129230_80167677_80167812_80168874_80169031_80171281_80171391_80200933_80201032_80203101_80203213_80273134_80273222_80343663_80343813_80345974
transcript_172393.nnic	chr6	+	2742	11	Fusion	ENSG00000083123.15_ENSG00000272129.1	novel	1514	11	NA	NA	-11	0	multi-exon	FALSE	non_canonical	0	0	junction_10	116.211057993635	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTCTGTCTCTCTGTCA	80100689	True	NA	9	True	AATAAA	-27	NA	80106635	80356859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr6_+_80106890_80127546_80127625_80129160_80129230_80167677_80167812_80168874_80169031_80171281_80171391_80200933_80201032_80203101_80203213_80273134_80273222_80343663_80343813_80355362
transcript_172398.known	chr6	+	3668	10	FSM	ENSG00000083123.15	ENST00000320393.9	3668	10	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_3	24.9923445068809	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTGTATGTGTTCTT	80100724	True	NA	3	True	AATAAA	-17	NA	80106670	80346270	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_80106890_80127546_80127625_80129160_80129230_80167677_80167812_80168874_80169031_80171281_80171391_80200933_80201032_80203101_80203213_80273134_80273222_80343663
transcript_172402.known	chr6	+	2123	1	FSM	ENSG00000260645.2	ENST00000569267.1	2123	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACATTATTCTAAATCTCA	NA	False	NA	NA	False	AATAAA	-17	NA	80466957	80469080	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_80467000_80469100
transcript_172403.known	chr6	-	5664	3	FSM	ENSG00000112773.16	ENST00000369754.7	5664	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	11.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTTGCTGTCTACAA	-81752476	True	NA	0	True	AATAAA	-22	NA	81752708	81745729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_81750472_81751589_81752179_81752375
transcript_172404.known	chr6	-	5582	3	FSM	ENSG00000112773.16	ENST00000320172.11	5582	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTTGCTGTCTACAA	-81752449	True	NA	0	True	AATAAA	-22	NA	81752681	81745729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_81750472_81751589_81752179_81752430
transcript_172410.known	chr6	-	6040	29	FSM	ENSG00000005700.15	ENST00000306270.12	6040	29	0	0	0	0	multi-exon	TRUE	canonical	3	61	junction_25	16.8436689492957	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTTCATTTGAAGCTTT	-82246171	True	NA	-8	True	AGTAAA	-18	NA	82247744	82169986	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_82171557_82172379_82172513_82173366_82173439_82181878_82182029_82191072_82191217_82191786_82191880_82194478_82194643_82196297_82196447_82200140_82200254_82200586_82200709_82201421_82201483_82202527_82202646_82204856_82204959_82210813_82210911_82211366_82211405_82211489_82211573_82212706_82212794_82214226_82214830_82216075_82216251_82217959_82218138_82220589_82220714_82223439_82223621_82224067_82224186_82225476_82225648_82227191_82227303_82231717_82231843_82234158_82234256_82240165_82240844_82247561
transcript_172421.nic	chr6	-	2699	12	ISM	ENSG00000005700.15	ENST00000369751.2	4437	24	-20	22971	-20	-22971	5prime_fragment	FALSE	canonical	3	61	junction_8	10.3787768192819	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAGGGAAGATGATCCTG	-82246201	True	NA	NA	False	AAAAAG	-8	NA	82247774	82214301	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_82214830_82216075_82216251_82217959_82218138_82220589_82220714_82223439_82223621_82224067_82224186_82225476_82225648_82227191_82227303_82231717_82231843_82234158_82234256_82240165_82240844_82247561
transcript_172422.nic	chr6	-	2530	12	ISM	ENSG00000005700.15	ENST00000369751.2	4437	24	-13	23133	-13	-23133	5prime_fragment	FALSE	canonical	3	61	junction_8	10.3787768192819	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCAGAAGAATATCAGGGAA	-82246194	True	NA	NA	False	AATACA	-13	NA	82247767	82214463	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_82214830_82216075_82216251_82217959_82218138_82220589_82220714_82223439_82223621_82224067_82224186_82225476_82225648_82227191_82227303_82231717_82231843_82234158_82234256_82240165_82240844_82247561
transcript_172428.known	chr6	+	3392	3	FSM	ENSG00000146242.9	ENST00000535040.4	3392	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	111	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTCTCAATGTCTTA	82363189	False	NA	NA	False	AATAAA	-22	NA	82363205	82367417	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_82363540_82363645_82363909_82364622
transcript_172433.known	chr6	+	2881	2	FSM	ENSG00000146242.9	ENST00000543496.3	2881	2	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTCTCAATGTCTTA	82363441	True	NA	NA	False	AATAAA	-22	NA	82364243	82367417	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_82364330_82364622
transcript_172435.known	chr6	+	2890	2	FSM	ENSG00000146242.9	ENST00000369750.4	2890	2	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTCAATGTCTTAATG	82362082	True	NA	NA	False	AATAAA	-25	NA	82363816	82367420	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_82363909_82364622
transcript_172438.known	chr6	-	1352	11	FSM	ENSG00000118420.17	ENST00000430071.6	1352	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	43.9881802306029	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTATTAGAGCTGGGCAT	-83062911	True	NA	NA	False	NA	NA	NA	83065839	82893024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_82893043_82957311_82957451_83018972_83019137_83022452_83022562_83023968_83024039_83038415_83038486_83044427_83044660_83049708_83049773_83054147_83054239_83057825_83058023_83065641
transcript_172442.known	chr6	-	1925	10	FSM	ENSG00000118420.17	ENST00000369747.8	1925	10	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_5	11.4255507471869	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTTGTTCTATTCTTTG	-83062913	True	NA	0	True	AATAAA	-24	NA	83065841	82892389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_82893043_82957311_82957451_83018972_83019137_83022452_83022562_83023968_83024039_83038415_83038486_83044427_83044660_83054147_83054239_83057825_83058023_83065641
transcript_172443.known	chr6	-	1246	10	FSM	ENSG00000118420.17	ENST00000509102.5	1246	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	34.2960963117119	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTCAGGAGGCATCAATT	-83062823	True	NA	NA	False	NA	NA	NA	83065751	82892952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_82893043_82957311_82957451_83018972_83019137_83022478_83022562_83023968_83024039_83038415_83038486_83044427_83044660_83054147_83054239_83057825_83058023_83065641
transcript_17245.known	chr1	+	710	7	FSM	ENSG00000152061.24	ENST00000465412.5	710	7	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_5	32.8705372974374	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGGTAAGGAGTGAAATC	174870695	False	NA	NA	False	NA	NA	NA	174874470	174982900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_174874507_174877391_174877606_174957456_174957550_174969276_174969388_174976077_174976183_174978806_174978891_174982833
transcript_172452.known	chr6	-	6079	13	FSM	ENSG00000013375.16	ENST00000513973.6	6079	13	0	0	0	0	multi-exon	FALSE	canonical	3	381	junction_5	40.239560412885	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCTCCTTTGACTTCA	-83185144	True	NA	0	True	AATAAA	-21	NA	83193265	83164872	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_83169324_83170304_83170479_83171936_83172060_83174373_83174488_83175961_83176061_83178672_83178757_83179809_83179968_83181735_83181932_83182844_83182979_83187007_83187076_83188613_83188799_83190808_83191015_83193178
transcript_172459.known	chr6	-	1952	13	FSM	ENSG00000013375.16	ENST00000509219.2	1952	13	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	128.85036541146	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTCTGTTTTCCGTTTA	-83185147	True	NA	-1	True	ATTAAA	-22	NA	83193268	83169520	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_83169842_83170304_83170479_83171936_83172060_83174373_83174488_83175961_83176061_83178672_83178757_83179809_83179968_83181735_83181932_83182844_83182979_83187007_83187076_83188613_83188799_83190808_83191015_83193178
transcript_172460.known	chr6	-	1893	12	FSM	ENSG00000013375.16	ENST00000650642.1	1893	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	136.160636779741	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAAATCTTATTACCAAC	-83185136	True	NA	-28	True	NA	NA	NA	83193257	83168927	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_83169324_83170304_83170479_83174373_83174488_83175961_83176061_83178672_83178757_83179809_83179968_83181735_83181932_83182844_83182979_83187007_83187076_83188613_83188799_83190808_83191015_83193178
transcript_172475.known	chr6	-	561	5	FSM	ENSG00000013375.16	ENST00000505470.5	561	5	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	208.103790210558	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTACATGGTGTATTGTCG	-83185134	True	NA	NA	False	NA	NA	NA	83193255	83182949	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_83182979_83187007_83187076_83188613_83188795_83190808_83191015_83193178
transcript_172481.known	chr6	+	3769	3	FSM	ENSG00000013392.8	ENST00000369724.5	3769	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	5.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTTGCTTTTCATTCC	83191937	True	NA	19	True	AGTAAA	-20	NA	83193356	83198935	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_83193444_83194311_83194653_83195594
transcript_172484.nic	chr6	+	2259	2	NIC	ENSG00000013392.8	novel	3769	3	NA	NA	-20	-2398	intron_retention	FALSE	canonical	3	83	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGAAGCTGATTTGATT	83191917	True	NA	7	True	AATAAA	-15	NA	83193336	83196537	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_83194653_83195594
transcript_172486.known	chr6	-	3338	14	FSM	ENSG00000065833.9	ENST00000369705.4	3338	14	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_6	9.09385643454255	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTCTTAAAATGTTACA	-83430353	True	NA	-9	True	AATAAA	-18	NA	83431051	83210401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_83212095_83216497_83216597_83223759_83223934_83227334_83227478_83228825_83228932_83237716_83237831_83239538_83239637_83253628_83253739_83315309_83315414_83346172_83346335_83352063_83352140_83398366_83398517_83407767_83407902_83430876
transcript_17249.known	chr1	+	524	4	FSM	ENSG00000152061.24	ENST00000529474.2	524	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	4.49691252107735	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTGTCGTTAAAGGAAGA	174238692	True	NA	NA	False	NA	NA	NA	174238821	174244320	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_174238950_174241482_174241658_174242981_174243180_174244297
transcript_172490.known	chr6	+	2444	2	FSM	ENSG00000146250.7	ENST00000369700.4	2444	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGTCTGGTTATTTTCC	83512081	True	NA	10	True	AATAAA	-22	NA	83512533	83525704	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_83512695_83523421
transcript_172491.known	chr6	+	521	3	FSM	ENSG00000203877.9	ENST00000369687.2	521	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	4	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTGGTATTTGGCCTT	83853502	True	NA	NA	False	AATAAA	-17	NA	83853591	83857515	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_83853774_83854096_83854162_83857241
transcript_172492.known	chr6	-	1856	1	FSM	ENSG00000287705.1	ENST00000656981.1	1856	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGATTGTAAACTATAGT	-83854144	True	NA	NA	False	AATAAA	-33	NA	83854167	83852311	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_83852300_83854200
transcript_172496.known	chr6	+	9205	16	FSM	ENSG00000065615.14	ENST00000369681.10	9205	16	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_14	14.35208076281	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTCTCTCTGTATTTT	83857218	True	NA	3	True	AATAAA	-15	NA	83859688	83967423	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_83859858_83864174_83864329_83893521_83893623_83909008_83909091_83914415_83914449_83918004_83918066_83919396_83919455_83921081_83921176_83922437_83922471_83924469_83924593_83934594_83934736_83936223_83936377_83940055_83940207_83940514_83940602_83955297_83955463_83959823
transcript_172505.known	chr6	+	2137	4	FSM	ENSG00000135324.6	ENST00000257776.5	2137	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	2.94392028877595	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAATTTCCTCTGGTTCT	84033246	True	NA	4	True	AATAAA	-15	NA	84033771	84090881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_84033884_84055311_84055446_84062892_84062993_84089090
transcript_17251.known	chr1	+	648	4	FSM	ENSG00000152061.24	ENST00000478442.5	648	4	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_3	60.1793615416079	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGTAGTGGTGTTTGTT	174870682	True	NA	14	True	AATAAA	-20	NA	174874457	174958182	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_174874507_174877391_174877606_174957456_174957550_174957890
transcript_172514.nic	chr6	-	2087	15	ISM	ENSG00000135315.12	ENST00000403245.8	5155	27	-36	50574	-36	-52	5prime_fragment	FALSE	canonical	3	16	junction_10	4.57421789902439	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAGAAAGAACTAGAAAATA	-84226753	True	NA	-4	True	ATTAAA	-18	NA	84227679	84174823	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_84174955_84175213_84175348_84185186_84185449_84186331_84186624_84193608_84193691_84194883_84195076_84200788_84200906_84201736_84201768_84203980_84204097_84212956_84213025_84215281_84215466_84215775_84215923_84221056_84221172_84226336_84226453_84227579
transcript_172517.known	chr6	-	4020	29	FSM	ENSG00000135317.14	ENST00000683481.1	4020	29	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_17	57.6289481360306	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGATTGTTAGGTGTTA	-85593882	False	NA	NA	False	NA	NA	NA	85593897	85504994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547083_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572375_85574257_85574379_85593578
transcript_172518.known	chr6	-	3412	29	FSM	ENSG00000135317.14	ENST00000684581.1	3412	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	65.7476138311482	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCATCCTATATGAGTT	-85592176	True	NA	NA	False	TATAAA	-1	NA	85593857	85505527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517872_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572372_85574257_85574379_85593578
transcript_172519.known	chr6	-	3193	29	FSM	ENSG00000135317.14	ENST00000505648.5	3193	29	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_28	50.6366986986913	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTCTCATAGTCTTTCA	-85594122	True	NA	-11	True	AATAAA	-31	NA	85594156	85505797	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572375_85574257_85574379_85593833
transcript_172520.known	chr6	-	4167	28	FSM	ENSG00000135317.14	ENST00000683542.1	4167	28	0	0	0	0	multi-exon	TRUE	canonical	1	5	junction_24	58.3440201850886	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTATAGGTAAACTGGAAA	-85593882	False	NA	NA	False	TTTAAA	-32	NA	85593897	85504775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85572136_85572216_85572297_85572375_85574257_85574379_85593578
transcript_172522.known	chr6	-	3795	28	FSM	ENSG00000135317.14	ENST00000682454.1	3795	28	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_22	58.5305894723268	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGATTGTTAGGTGTTA	-85593770	False	NA	NA	False	NA	NA	NA	85593785	85504994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572375_85574257_85574379_85593578
transcript_172523.known	chr6	-	3693	28	FSM	ENSG00000135317.14	ENST00000683196.1	3693	28	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_22	65.6400585309811	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGATTGTTAGGTGTTA	-85593923	False	NA	NA	False	NA	NA	NA	85593938	85504994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572375_85574257_85574379_85593833
transcript_172525.known	chr6	-	3111	28	FSM	ENSG00000135317.14	ENST00000369627.6	3111	28	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_13	45.9132300253209	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTGAGTCTCATAGTCT	-85592169	True	NA	-15	True	AATAAA	-27	NA	85593850	85505801	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572375_85574257_85574379_85593578
transcript_172526.known	chr6	-	3686	28	FSM	ENSG00000135317.14	ENST00000682995.1	3686	28	0	0	0	0	multi-exon	TRUE	canonical	3	5	junction_16	68.1147865199707	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGATTGTTAGGTGTTA	-85592196	True	NA	NA	False	NA	NA	NA	85593877	85504994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85541984_85542044_85543181_85543307_85543604_85543761_85547115_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572375_85574257_85574379_85593833
transcript_172527.known	chr6	-	3257	28	FSM	ENSG00000135317.14	ENST00000683073.1	3257	28	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_11	58.7730050105473	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCATCCTATATGAGTT	-85593882	False	NA	NA	False	TATAAA	-1	NA	85593897	85505527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572375_85574257_85574379_85593578
transcript_172528.known	chr6	-	3375	28	FSM	ENSG00000135317.14	ENST00000681981.1	3375	28	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_10	58.654202753817	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCATCCTATATGAGTT	-85593882	False	NA	NA	False	TATAAA	-1	NA	85593897	85505527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572375_85574257_85574379_85593578
transcript_17253.known	chr1	+	772	4	FSM	ENSG00000152061.24	ENST00000486220.5	772	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	98.4287672493272	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGGTGTTTGTTGCAAC	174874771	False	NA	19	True	AATAAA	-25	NA	174875545	174958187	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_174875714_174877391_174877606_174957456_174957550_174957890
transcript_172531.known	chr6	-	3856	27	FSM	ENSG00000135317.14	ENST00000683458.1	3856	27	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_17	67.1845576966866	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGATTGTTAGGTGTTA	-85593882	False	NA	NA	False	NA	NA	NA	85593897	85504994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547115_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85572136_85572216_85572297_85572375_85574257_85574379_85593578
transcript_172532.known	chr6	-	3821	27	FSM	ENSG00000135317.14	ENST00000684647.1	3821	27	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_25	69.3494815533323	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTATAGGTAAACTGGAAA	-85593882	False	NA	NA	False	TTTAAA	-32	NA	85593897	85504775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85572136_85572216_85572297_85572372_85574257_85574379_85593833
transcript_172533.known	chr6	-	3553	27	FSM	ENSG00000135317.14	ENST00000683878.1	3553	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	67.1088491417942	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGATTGTTAGGTGTTA	-85592205	True	NA	NA	False	NA	NA	NA	85593886	85504994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85567533_85567578_85572136_85572216_85572297_85572375_85574257_85574379_85593833
transcript_172534.known	chr6	-	3500	26	FSM	ENSG00000135317.14	ENST00000683195.1	3500	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	68.380862819944	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGATTGTTAGGTGTTA	-85592196	True	NA	NA	False	NA	NA	NA	85593877	85504994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85572136_85572216_85572297_85572375_85574257_85574379_85593833
transcript_172535.known	chr6	-	3348	26	FSM	ENSG00000135317.14	ENST00000346348.7	3348	26	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_22	58.1766138581475	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGGATTTGTCCTTATTC	-85593898	False	NA	NA	False	AATAAA	-29	NA	85593913	85505495	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85572136_85572216_85572297_85572375_85574257_85574379_85593578
transcript_172536.known	chr6	-	3773	26	FSM	ENSG00000135317.14	ENST00000682991.1	3773	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	59.2611306000822	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGATTGTTAGGTGTTA	-85593882	False	NA	NA	False	NA	NA	NA	85593897	85504994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572375_85574257_85574379_85593578
transcript_172542.known	chr6	-	2584	15	FSM	ENSG00000135317.14	ENST00000682168.1	2584	15	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_4	21.9279897549656	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCAGACTGTTTCAAAAAA	-85593882	False	NA	NA	False	NA	NA	NA	85593897	85541027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572375_85574257_85574379_85593578
transcript_172546.known	chr6	-	6427	12	FSM	ENSG00000135316.19	ENST00000678878.1	6427	12	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	283.999185192639	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTAGGATCTCCAGGA	-85642963	False	NA	-27	True	AATAAA	-17	NA	85642978	85608334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85612921_85614980_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85642796
transcript_172547.known	chr6	-	6336	12	FSM	ENSG00000135316.19	ENST00000677771.1	6336	12	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_11	365.932252231394	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTAGGATCTCCAGGA	-85641637	True	NA	-27	True	AATAAA	-17	NA	85643840	85608334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85612921_85614980_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85643749
transcript_172551.known	chr6	-	1804	12	FSM	ENSG00000135316.19	ENST00000444272.2	1804	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_11	324.883857187699	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGGAAATCAAGCAACCT	-85642027	False	NA	NA	False	NA	NA	NA	85642042	85612831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85612924_85614980_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85641989
transcript_172556.known	chr6	-	2158	12	FSM	ENSG00000135316.19	ENST00000676542.1	2158	12	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	316.77734183101	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGTAGATTTTTCCCCT	-85642963	False	NA	-16	True	AATAAA	-26	NA	85642978	85612568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85612924_85615018_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85642796
transcript_17256.known	chr1	+	2835	6	FSM	ENSG00000116161.18	ENST00000613570.4	2835	6	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	1196.81400392876	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAGTATAAAAACAA	174999151	False	NA	NA	False	AATAAA	-24	NA	174999162	175011715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_174999690_175004613_175004834_175006744_175006842_175007097_175007198_175008608_175008707_175009922
transcript_172564.known	chr6	-	6770	11	FSM	ENSG00000135316.19	ENST00000616122.5	6770	11	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_10	290.868630140825	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAGTGTTACAGCTTCCT	-85642907	False	35266	-1	True	AATAAA	-21	NA	85642922	85607778	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85612924_85614980_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85642796
transcript_172575.known	chr6	-	2754	11	FSM	ENSG00000135316.19	ENST00000369622.8	2754	11	0	0	0	0	multi-exon	FALSE	canonical	3	688	junction_10	138.500685918879	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAAGTTGGTAAGTATTT	-85642871	False	NA	NA	False	AATAAA	-20	NA	85642886	85613975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85642796
transcript_172576.known	chr6	-	2552	11	FSM	ENSG00000135316.19	ENST00000676688.1	2552	11	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_10	294.129580287328	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGTGTTTACAATTCG	-85641664	True	NA	40	True	AATAAA	-28	NA	85643867	85614205	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85643749
transcript_172582.known	chr6	-	3310	10	FSM	ENSG00000135316.19	ENST00000678899.1	3310	10	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_9	286.441686048265	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATGACTTGAAAGACAAAC	-85642996	False	NA	NA	False	AATAAA	-17	NA	85643011	85613384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85642796
transcript_172584.known	chr6	-	2421	10	FSM	ENSG00000135316.19	ENST00000677514.1	2421	10	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_6	410.507003594336	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGTGTTTACAATTCG	-85642954	False	35266	40	True	AATAAA	-28	NA	85642969	85614205	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637268_85637357_85640220_85640329_85640445_85640565_85642796
transcript_172587.nic	chr6	-	1787	10	ISM	ENSG00000135316.19	ENST00000369622.8	2754	11	-434	4871	-309	-4119	5prime_fragment	FALSE	canonical	3	688	junction_9	135.538523520159	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTCAGAGGCAAGCAGCAAA	-85608054	True	NA	21	True	AAGAAA	-6	NA	85643320	85618846	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85642796
transcript_17259.known	chr1	+	2869	6	FSM	ENSG00000116161.18	ENST00000367679.7	2869	6	0	0	0	0	multi-exon	FALSE	canonical	3	2912	junction_4	112.51915392501	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGAAGCCGAGGGACGAGA	174950661	True	NA	NA	False	NA	NA	NA	174999946	175012027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_175000196_175004613_175004834_175006744_175006842_175007097_175007198_175008608_175008707_175009922
transcript_172598.nic	chr6	-	1046	8	ISM	ENSG00000135316.19	ENST00000678816.1	2317	9	-25	8430	2	-7908	5prime_fragment	FALSE	canonical	3	688	junction_7	150.536591253165	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGGCTTTTGCTTTCTTG	-85642961	False	NA	NA	False	AAGAAA	-6	NA	85642976	85622635	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85642796
transcript_172604.known	chr6	-	738	6	FSM	ENSG00000203875.13	ENST00000669824.1	738	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	2713.18636293197	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTCCTTTTTGTTATT	-85678738	False	NA	-12	True	AATAAA	-16	NA	85678748	85677081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85677192_85677423_85677493_85677794_85677876_85677953_85678033_85678135_85678189_85678402
transcript_172605.known	chr6	-	790	3	FSM	ENSG00000203875.13	ENST00000435947.6	790	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	21.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTCCTTTTTGTTATT	-85678738	False	NA	-12	True	AATAAA	-16	NA	85678748	85677081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85677186_85677419_85677493_85678135
transcript_172606.known	chr6	-	451	6	FSM	ENSG00000203875.13	ENST00000414002.6	451	6	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	2648.09614629076	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTCCTTTTTGTTATT	-85678738	False	NA	-12	True	AATAAA	-16	NA	85678748	85677081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85677192_85677423_85677493_85677790_85677876_85677953_85678033_85678135_85678189_85678693
transcript_172607.known	chr6	-	866	4	FSM	ENSG00000203875.13	ENST00000428833.6	866	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3484.71063679931	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTATGTTCCTTTTTGTT	-85678738	False	NA	-15	True	AATAAA	-13	NA	85678748	85677084	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85677186_85677419_85677493_85677953_85678033_85678135
transcript_172608.known	chr6	-	279	4	FSM	ENSG00000203875.13	ENST00000660949.1	279	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	2778.10754931402	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTATGTTCCTTTTTGT	-85678738	False	NA	-16	True	AATAAA	-12	NA	85678748	85677085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85677192_85677423_85677493_85678135_85678189_85678697
transcript_172609.known	chr6	-	1008	4	FSM	ENSG00000203875.13	ENST00000670327.1	1008	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	3227.74730526828	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTAATTTTGGATTATGT	-85586093	True	NA	13	True	AATAAA	-2	NA	85678736	85677095	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85677192_85677423_85677493_85677790_85678033_85678135
transcript_172610.known	chr6	-	1000	2	FSM	ENSG00000203875.13	ENST00000587692.6	1000	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTCCATTGTATTATT	-85678738	False	NA	1	True	ATTAAA	-25	NA	85678748	85665760	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85666148_85678135
transcript_172611.known	chr6	-	823	4	FSM	ENSG00000203875.13	ENST00000427501.6	823	4	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_3	3189.41649139079	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTCCTTTTTGTTATT	-85678738	False	NA	-12	True	AATAAA	-16	NA	85678748	85677081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85677192_85677423_85678033_85678135_85678189_85678697
transcript_172612.known	chr6	-	1187	4	FSM	ENSG00000203875.13	ENST00000661360.1	1187	4	0	0	0	0	multi-exon	FALSE	canonical	3	6514	junction_2	464.188419598	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCTTTTTGTTATTACT	-85678738	False	NA	-9	True	AATAAA	-19	NA	85678748	85677078	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85677493_85677794_85677876_85677953_85678033_85678135
transcript_172613.known	chr6	-	977	3	FSM	ENSG00000203875.13	ENST00000662245.1	977	3	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_2	2813.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCTTTTTGTTATTACT	-85678738	False	NA	-9	True	AATAAA	-19	NA	85678748	85677078	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_85677192_85677423_85677493_85677953
transcript_172614.known	chr6	+	12341	8	FSM	ENSG00000188994.13	ENST00000369577.8	12341	8	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_5	8.17412542909712	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCTGCCTTTAAACATTC	87150605	True	NA	25	True	ATTAAA	-33	NA	87155564	87265943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_87155760_87215902_87216058_87216298_87216378_87218595_87218732_87233324_87233528_87243474_87243612_87245502_87245645_87254649
transcript_17262.known	chr1	+	804	5	FSM	ENSG00000116161.18	ENST00000473925.1	804	5	0	0	0	0	multi-exon	FALSE	canonical	3	2912	junction_4	121.727153913989	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGATTTTTAATAGTTT	174950669	True	NA	NA	False	TTTAAA	-24	NA	174999954	175008754	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_175000196_175004613_175004834_175006744_175006842_175007097_175007198_175008608
transcript_172620.known	chr6	+	2405	3	FSM	ENSG00000111850.11	ENST00000229570.9	2405	3	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	34.5	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCAAAGATTCTGAACATT	87319131	True	NA	7	True	AATAAA	-15	NA	87322592	87342322	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_87322633_87337008_87337167_87340115
transcript_172624.known	chr6	-	2279	3	FSM	ENSG00000164411.12	ENST00000525899.6	2279	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	10	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTGGCTGTCATTGGTA	-87328990	True	NA	NA	False	AATAAA	-21	NA	87329278	87282979	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_87284940_87322865_87323044_87329137
transcript_172626.known	chr6	-	674	3	FSM	ENSG00000164411.12	ENST00000442973.2	674	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	11.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCATGAAAGTGGAAAGCA	-87328953	True	NA	NA	False	AATAAA	-28	NA	87329241	87322282	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_87322675_87322865_87323044_87329137
transcript_172629.known	chr6	+	1854	8	FSM	ENSG00000164414.19	ENST00000369552.9	1854	8	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_5	5.8970764115858	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGTTTAATCACTTTAT	87472149	True	NA	85	True	AATAAA	-17	NA	87472973	87512336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_87473020_87477361_87477540_87500507_87500668_87501157_87501311_87506381_87506449_87508419_87508597_87509040_87509176_87511398
transcript_172639.nnic	chr6	-	2151	21	FSM	ENSG00000146282.19	ENST00000691725.1	2339	21	13	175	0	0	multi-exon	FALSE	canonical	3	27	junction_1	129.276167563863	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTCATGGTCAGTAGGT	-87583463	True	NA	-5	True	AATAAA	-14	NA	87590015	87513937	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_87514309_87514427_87514500_87514956_87515021_87516805_87516881_87518168_87518265_87518629_87518740_87518823_87518892_87519582_87519708_87520179_87520257_87521463_87521525_87524556_87524653_87529541_87529649_87530783_87530943_87541917_87541995_87545615_87545700_87548590_87548647_87555407_87555506_87562701_87562786_87564129_87564233_87569516_87569591_87589921
transcript_172648.nnic	chr6	-	2486	20	NIC	ENSG00000146282.19	novel	2570	21	NA	NA	2	0	intron_retention	FALSE	canonical	3	234	junction_19	87.8085931470885	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTCATGGTCAGTAGGT	-87583458	True	NA	-5	True	AATAAA	-14	NA	87590010	87513937	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_87514500_87514956_87515021_87516805_87516881_87518168_87518265_87518629_87518740_87518823_87518892_87519582_87519708_87520179_87520257_87521463_87521525_87524556_87524653_87529541_87529649_87530783_87530943_87541917_87541995_87545615_87545700_87548590_87548647_87555407_87555506_87562701_87562786_87564129_87564233_87569516_87569591_87589700
transcript_172649.known	chr6	-	2242	20	FSM	ENSG00000146282.19	ENST00000369536.10	2242	20	0	0	0	0	multi-exon	TRUE	canonical	3	399	junction_19	60.3226780304434	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTCATGGTCAGTAGGT	-87583435	True	NA	-5	True	AATAAA	-14	NA	87589987	87513937	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_87514500_87514956_87515021_87516805_87516881_87518168_87518265_87518629_87518740_87518823_87518892_87519582_87519708_87520179_87520257_87521463_87521525_87524556_87524653_87529541_87529649_87530783_87530943_87541917_87541995_87545615_87545700_87548590_87548647_87555407_87555506_87562701_87562786_87564129_87564233_87569516_87569591_87589921
transcript_172653.nnic	chr6	-	2017	20	ISM	ENSG00000146282.19	ENST00000693431.1	2361	21	2	461	2	4	5prime_fragment	FALSE	canonical	3	234	junction_19	87.8085931470885	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATGGCTTTTAAAATG	-87583458	True	NA	-33	True	AATGAA	-41	NA	87590010	87514406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_87514500_87514956_87515021_87516805_87516881_87518168_87518265_87518629_87518740_87518823_87518892_87519582_87519708_87520179_87520257_87521463_87521525_87524556_87524653_87529541_87529649_87530783_87530943_87541917_87541995_87545615_87545700_87548590_87548647_87555407_87555506_87562701_87562786_87564129_87564233_87569516_87569591_87589700
transcript_172662.nnic	chr6	-	1961	19	FSM	ENSG00000146282.19	ENST00000693327.1	2388	19	-23	450	2	4	multi-exon	FALSE	canonical	3	35	junction_14	147.241854036979	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATGGCTTTTAAAATG	-87583458	True	NA	-33	True	AATGAA	-41	NA	87590010	87514406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_87514500_87514956_87515021_87516805_87516881_87518168_87518265_87518629_87518740_87518823_87518892_87519582_87519708_87520179_87520257_87521463_87521525_87524556_87524653_87529541_87529649_87530783_87530943_87541917_87541995_87545615_87545700_87555407_87555506_87562701_87562786_87564129_87564233_87569516_87569591_87589700
transcript_17267.known	chr1	-	910	3	FSM	ENSG00000120333.4	ENST00000367677.3	910	3	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	517	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCTCCCCTTAACTATT	-175014741	True	NA	-49	True	NA	NA	NA	175023415	175014244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_175014852_175018417_175018577_175023271
transcript_17268.known	chr1	-	2115	3	FSM	ENSG00000120333.4	ENST00000476371.1	2115	3	0	0	0	0	multi-exon	FALSE	canonical	3	991	junction_2	62.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGTTGGTATTATTAAGAG	-175014751	True	NA	0	True	ATTAAA	-14	NA	175023425	175012957	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_175014852_175018417_175018577_175023363
transcript_172698.nnic	chr6	+	2603	21	NIC	ENSG00000135336.16	novel	2498	20	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	3	98	junction_3	176.597812840363	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGCAGTTGCTTTAGC	87584049	True	NA	16	True	AATAAA	-23	NA	87590116	87667451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_87590193_87594352_87594408_87594526_87594614_87601783_87601882_87603383_87603529_87605916_87606022_87607672_87607825_87609095_87609230_87612088_87612249_87616313_87616428_87621353_87621488_87621949_87622014_87634844_87634962_87636406_87636487_87653115_87653250_87656905_87656983_87657920_87658019_87663002_87663145_87664742_87664860_87665753_87665834_87667017
transcript_17271.known	chr1	+	688	2	FSM	ENSG00000116161.18	ENST00000483307.1	688	2	0	0	0	0	multi-exon	FALSE	canonical	3	3136	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAACAAGGAAGGAACTTA	174950659	True	NA	NA	False	NA	NA	NA	174999944	175005050	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_175000196_175004613
transcript_172710.known	chr6	+	2501	20	FSM	ENSG00000135336.16	ENST00000257789.4	2501	20	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_14	128.498164941573	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGCAGTTGCTTTAGC	87584067	True	NA	16	True	AATAAA	-23	NA	87590134	87667451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_87590193_87594352_87594408_87601783_87601882_87603383_87603529_87605916_87606022_87607672_87607825_87609095_87609230_87612088_87612249_87616313_87616428_87621353_87621488_87621949_87622014_87634844_87634962_87636406_87636487_87653115_87653250_87656902_87656983_87657920_87658019_87663002_87663145_87664742_87664860_87665753_87665834_87667017
transcript_172711.known	chr6	+	2498	20	FSM	ENSG00000135336.16	ENST00000392844.8	2498	20	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_14	105.424192611618	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGCAGTTGCTTTAGC	87584067	True	NA	16	True	AATAAA	-23	NA	87590134	87667451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_87590193_87594352_87594408_87601783_87601882_87603383_87603529_87605916_87606022_87607672_87607825_87609095_87609230_87612088_87612249_87616313_87616428_87621353_87621488_87621949_87622014_87634844_87634962_87636406_87636487_87653115_87653250_87656905_87656983_87657920_87658019_87663002_87663145_87664742_87664860_87665753_87665834_87667017
transcript_172727.nnic	chr6	+	2404	19	NIC	ENSG00000135336.16	novel	2498	20	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_8	171.809613263858	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGCAGTTGCTTTAGC	87584047	True	NA	16	True	AATAAA	-23	NA	87590114	87667451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_87590193_87594352_87594408_87601783_87601882_87603383_87603529_87605916_87606022_87607672_87607825_87609095_87609230_87612088_87612249_87621353_87621488_87621949_87622014_87634844_87634962_87636406_87636487_87653115_87653250_87656905_87656983_87657920_87658019_87663002_87663145_87664742_87664860_87665753_87665834_87667017
transcript_172728.known	chr6	+	2470	19	FSM	ENSG00000135336.16	ENST00000546266.5	2470	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	175.200775478863	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGTTGCTTTAGCAA	87583999	True	NA	18	True	AATAAA	-25	NA	87590066	87667453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_87590193_87594352_87594408_87603383_87603529_87605916_87606022_87607672_87607825_87609095_87609230_87612088_87612249_87616313_87616428_87621353_87621488_87621949_87622014_87634844_87634962_87636406_87636487_87653115_87653250_87656905_87656983_87657920_87658019_87663002_87663145_87664742_87664860_87665753_87665834_87667017
transcript_172736.known	chr6	+	2035	15	FSM	ENSG00000135336.16	ENST00000681069.1	2035	15	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_14	147.382762124438	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTATAGAGCAGAAATTGA	87584068	True	NA	NA	False	TTTAAA	-11	NA	87590135	87657388	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_87590193_87594352_87594408_87601783_87601882_87603383_87603529_87605916_87606022_87607672_87607825_87609095_87609230_87612088_87612249_87616313_87616428_87621353_87621488_87621949_87622014_87634844_87634962_87636406_87636487_87653115_87653250_87656902
transcript_172739.nic	chr6	+	1101	10	ISM	ENSG00000135336.16	ENST00000681069.1	2035	15	-1	35955	0	11902	5prime_fragment	FALSE	canonical	3	524	junction_9	109.844446692292	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTATCAAATAATCAAT	87584067	True	NA	NA	False	AATAAA	-1	NA	87590134	87621433	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_87590193_87594352_87594408_87601783_87601882_87603383_87603529_87605916_87606022_87607672_87607825_87609095_87609230_87612088_87612249_87616313_87616428_87621353
transcript_172745.known	chr6	+	471	4	FSM	ENSG00000135336.16	ENST00000468486.2	471	4	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	388.868443907019	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTACCACCTTGGCCTTA	87584062	True	NA	3	True	AATAAA	-17	NA	87590129	87595437	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_87590193_87594352_87594408_87594526_87594614_87595171
transcript_17275.known	chr1	-	1271	1	FSM	ENSG00000287697.1	ENST00000670650.1	1271	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCTAATGCAGTGAACAGT	-174999552	True	NA	NA	False	AATAAA	-16	NA	174999623	174998352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_174998400_174999600
transcript_172750.known	chr6	-	1898	5	FSM	ENSG00000135334.9	ENST00000257787.6	1898	5	0	0	0	0	multi-exon	FALSE	canonical	3	533	junction_3	16.1012421881046	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTTCCAGGAATCAGTG	-87693706	True	NA	-12	True	AATAAA	-21	NA	87702233	87674859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_87675608_87675859_87675932_87677817_87677968_87681619_87681764_87701449
transcript_17276.known	chr1	-	4548	4	FSM	ENSG00000235750.10	ENST00000423313.6	4548	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	4.18993502999218	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGTCTGCCATATTTCT	-175191525	True	NA	0	True	AATAAA	-21	NA	175192776	175156985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_175161147_175166561_175166738_175177610_175177685_175192639
transcript_172763.known	chr6	-	4825	16	FSM	ENSG00000111880.16	ENST00000369485.9	4825	16	0	0	0	0	multi-exon	TRUE	canonical	3	154	junction_5	29.1575033224726	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGTCGTGAACTACCAAA	-88957525	True	NA	NA	False	AATAAA	-14	NA	88963618	88609896	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_88612883_88614271_88614396_88678352_88678420_88769773_88769875_88801563_88801633_88844356_88844522_88849754_88849827_88853628_88853765_88890494_88890597_88891805_88891916_88904714_88904956_88906364_88906441_88928984_88929074_88929163_88929268_88941070_88941181_88963345
transcript_172767.known	chr6	-	1725	15	FSM	ENSG00000111880.16	ENST00000369475.7	1725	15	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	56.960109564788	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGCCTGTGACTTGAGG	-88957316	False	NA	NA	False	NA	NA	NA	88963409	88612718	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_88612883_88614271_88614396_88678352_88678420_88769773_88769875_88844356_88844522_88849754_88849827_88853628_88853765_88890494_88890597_88891805_88891916_88904714_88904956_88906364_88906441_88928984_88929074_88929163_88929268_88941070_88941181_88963345
transcript_172769.known	chr6	-	2017	14	FSM	ENSG00000111880.16	ENST00000627296.1	2017	14	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_3	31.2434608542947	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGTGAAT	-88957468	True	NA	NA	False	NA	NA	NA	88963561	88677993	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_88678420_88769773_88769875_88801563_88801633_88844356_88844522_88849754_88849827_88853628_88853765_88890494_88890597_88891805_88891916_88904714_88904956_88906364_88906441_88928984_88929074_88929163_88929268_88941070_88941181_88963345
transcript_172770.nic	chr6	-	1429	11	ISM	ENSG00000111880.16	ENST00000538899.2	1374	12	-243	74670	-34	-74670	5prime_fragment	FALSE	canonical	3	199	junction_6	21.7816436478058	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGACTGGGCTCATTGAC	NA	False	NA	NA	False	NA	NA	NA	88963652	88844439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_88844522_88849754_88849827_88853628_88853765_88890494_88890597_88891805_88891916_88904714_88904956_88906364_88906441_88928984_88929074_88929163_88929268_88941070_88941181_88963345
transcript_172774.nnic	chr6	+	1741	3	NNC	ENSG00000146278.11	novel	1345	2	NA	NA	-135	-322	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	16	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCTTGACTCTTTGTGTG	89081631	True	NA	18	True	TTTAAA	-31	NA	89081700	89084838	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_89082166_89082545_89082736_89083752
transcript_172775.known	chr6	+	2092	2	FSM	ENSG00000146278.11	ENST00000336032.4	2092	2	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAGTGGGAATGTTAAG	89074694	True	NA	NA	False	AAAAAG	-26	NA	89080750	89085160	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_89081435_89083752
transcript_172777.known	chr6	-	3589	5	FSM	ENSG00000154548.9	ENST00000452027.3	3589	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	36.8264510915727	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATCTGTGATCAGTTCTT	-89117173	True	NA	-1	True	AATAAA	-19	NA	89118071	89095958	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_89098948_89105118_89105261_89105426_89105531_89107153_89107259_89117822
transcript_172783.known	chr6	+	4703	7	FSM	ENSG00000146281.6	ENST00000275072.5	4703	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	6.56802016507934	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATTGTCTTGCTTTTTTA	89145419	True	NA	6	True	AATAAA	-16	NA	89146054	89165565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_89146610_89149264_89149414_89153042_89153186_89154747_89154903_89158324_89158461_89161782_89161891_89162108
transcript_172786.known	chr6	-	4164	8	FSM	ENSG00000198833.7	ENST00000435041.3	4164	8	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_2	14.6747040438814	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTTTTTGACCAAAGGT	-89352657	False	2077	-5	True	AATAAA	-20	NA	89352722	89326624	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_89329958_89333085_89333206_89335301_89335432_89338204_89338311_89338458_89338544_89342323_89342456_89343682_89343757_89352538
transcript_172799.known	chr6	-	4923	7	FSM	ENSG00000025039.15	ENST00000369415.9	4923	7	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_3	19.2353840616713	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTCTTACATCTCCACAT	-89412253	False	NA	21	True	GATAAA	-39	NA	89412273	89364615	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_89368208_89372436_89372586_89377670_89377814_89379223_89379339_89380167_89380368_89387294_89387591_89411845
transcript_17280.known	chr1	-	2485	3	FSM	ENSG00000235750.10	ENST00000545251.6	2485	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	12	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTCACTTGGGCTGCTT	-175191503	True	NA	NA	False	ATTAAA	-17	NA	175192754	175158952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_175161147_175166561_175166738_175192639
transcript_172805.known	chr6	+	2968	16	FSM	ENSG00000135299.17	ENST00000447838.6	2968	16	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_15	13.9628077405656	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCGTAATTCTCCAACTGT	89432511	True	NA	6	True	AATAAA	-14	NA	89433212	89631497	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_89433376_89566833_89567097_89595915_89596015_89603028_89603128_89606006_89606106_89612271_89612371_89613791_89613891_89616558_89616658_89617953_89618032_89621921_89622027_89623409_89623545_89623871_89624058_89624538_89624692_89627582_89627697_89629111_89629224_89630432
transcript_172806.known	chr6	+	5368	16	FSM	ENSG00000135299.17	ENST00000339746.9	5368	16	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_7	11.8707858019406	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAGTGTGAATACTTTGT	89432450	True	NA	NA	False	ATTAAA	-35	NA	89433151	89633821	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_89433376_89566833_89567097_89595915_89596015_89603028_89603128_89606006_89606106_89612271_89612371_89613791_89613891_89616558_89616658_89617953_89618032_89621921_89622027_89623409_89623545_89623871_89624058_89624538_89624692_89627582_89627697_89629111_89629239_89630432
transcript_172830.known	chr6	-	677	3	FSM	ENSG00000083099.11	ENST00000520318.1	677	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	124.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCAGGAGTTCAAGACCAG	-89636109	True	NA	NA	False	NA	NA	NA	89638749	89636912	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_89637354_89637724_89637883_89638671
transcript_172831.known	chr6	-	565	3	FSM	ENSG00000083099.11	ENST00000521961.1	565	3	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_2	21	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTGGACACAATCATTAG	-89638436	False	2640	38	True	AAGAAA	-26	NA	89638483	89637026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_89637354_89637724_89637883_89638403
transcript_172839.nic	chr6	-	2652	17	ISM	ENSG00000112159.12	ENST00000629399.2	17400	102	-111	118168	-40	-12457	5prime_fragment	FALSE	canonical	2	16	junction_6	8.24621125123532	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTGAAAATACCTTATTG	-89800204	True	NA	NA	False	NA	NA	NA	89819834	89761679	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_89761749_89762318_89762531_89771560_89771622_89772572_89772722_89774620_89774734_89776599_89776696_89780211_89780294_89781398_89781593_89785011_89785127_89787853_89787958_89789779_89789912_89790158_89790402_89793761_89793955_89794099_89794208_89794576_89794802_89803327_89803555_89819505
transcript_172840.nic	chr6	-	2627	10	ISM	ENSG00000112159.12	ENST00000629399.2	17400	102	-111	137130	-40	-31419	5prime_fragment	FALSE	canonical	2	23	junction_4	6.43102050155013	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATGGCATCTCCTCATT	-89800204	True	NA	NA	False	NA	NA	NA	89819834	89780641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_89781593_89785011_89785127_89787853_89787958_89789779_89789912_89790158_89790402_89793761_89793955_89794099_89794208_89794576_89794802_89803327_89803555_89819505
transcript_172841.nic	chr6	-	2461	10	ISM	ENSG00000112159.12	ENST00000629399.2	17400	102	-111	137296	-40	-31585	5prime_fragment	FALSE	canonical	2	23	junction_4	6.43102050155013	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCAGGCACGGTGGCAG	-89800204	True	NA	NA	False	AATACA	-5	NA	89819834	89780807	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_89781593_89785011_89785127_89787853_89787958_89789779_89789912_89790158_89790402_89793761_89793955_89794099_89794208_89794576_89794802_89803327_89803555_89819505
transcript_172842.nic	chr6	-	1836	10	ISM	ENSG00000112159.12	ENST00000629399.2	17400	102	-111	137921	-40	-32210	5prime_fragment	FALSE	canonical	2	23	junction_4	6.43102050155013	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCAACCCTTGAGGGAAGA	-89800204	True	NA	NA	False	AAAACA	-4	NA	89819834	89781432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_89781593_89785011_89785127_89787853_89787958_89789779_89789912_89790158_89790402_89793761_89793955_89794099_89794208_89794576_89794802_89803327_89803555_89819505
transcript_172844.nic	chr6	-	2169	5	ISM	ENSG00000112159.12	ENST00000439638.1	3654	24	-116	43452	-40	-43452	5prime_fragment	FALSE	canonical	3	34	junction_2	5.62916512459885	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAATGTAATATACATAT	-89800204	True	NA	NA	False	AGTAAA	-13	NA	89819834	89792674	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_89793955_89794099_89794208_89794576_89794802_89803327_89803555_89819505
transcript_172850.known	chr6	+	1153	7	FSM	ENSG00000118412.13	ENST00000552401.5	1153	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	31.4081553457414	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAGAAGAAAGAAAAGTT	89825697	True	NA	NA	False	TATAAA	-24	NA	89829893	89862793	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_89829935_89846561_89846645_89853165_89853235_89854816_89854918_89855469_89855545_89857083_89857200_89862125
transcript_172854.known	chr6	+	1280	7	FSM	ENSG00000118412.13	ENST00000419040.6	1280	7	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	22.6544084500616	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAGAAGAAAGAAAAGTT	89825703	True	NA	NA	False	TATAAA	-24	NA	89829899	89862793	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_89830068_89846561_89846645_89853165_89853235_89854816_89854918_89855469_89855545_89857083_89857200_89862125
transcript_172864.known	chr6	-	618	4	FSM	ENSG00000112182.15	ENST00000470301.5	618	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.942809041582063	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTTTGACCAGGGTTT	-90296729	False	NA	NA	False	NA	NA	NA	90296742	90088960	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_90089110_90206568_90206682_90271848_90271942_90296479
transcript_172878.known	chr6	-	4932	17	FSM	ENSG00000135341.18	ENST00000369329.8	4932	17	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_5	102.922737253485	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGTACATAAAAGTGGTGA	-90581644	True	NA	-14	True	AATAAA	-21	NA	90587072	90513578	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_90516682_90518446_90518563_90519257_90519320_90523677_90523784_90536336_90536402_90544551_90544633_90547257_90547388_90548046_90548178_90550467_90550550_90552048_90552180_90553457_90553587_90556499_90556625_90560075_90560215_90561621_90561668_90568557_90568624_90571696_90571808_90586763
transcript_172893.known	chr6	-	4633	16	FSM	ENSG00000135341.18	ENST00000369325.7	4633	16	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_1	131.269019785917	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAAAGTGGTGAATGACT	-90586749	False	NA	-8	True	AATAAA	-27	NA	90586883	90513572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_90516682_90519257_90519320_90523677_90523784_90536336_90536402_90544551_90544633_90547257_90547388_90548046_90548178_90550467_90550550_90552048_90552180_90553457_90553587_90556499_90556625_90560075_90560215_90561621_90561668_90568557_90568624_90571696_90571808_90586763
transcript_172895.known	chr6	-	4830	16	FSM	ENSG00000135341.18	ENST00000369332.7	4830	16	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_5	32.9176750900384	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAAAGTGGTGAATGACT	-90581617	True	NA	-8	True	AATAAA	-27	NA	90587045	90513572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_90516682_90518446_90518563_90519257_90519320_90523677_90523784_90536336_90536402_90547257_90547388_90548046_90548178_90550467_90550550_90552048_90552180_90553457_90553587_90556499_90556625_90560075_90560215_90561621_90561668_90568557_90568624_90571696_90571808_90586763
transcript_17290.known	chr1	-	2826	20	FSM	ENSG00000143207.21	ENST00000367669.8	2826	20	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_16	58.7607949651019	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGCTTGGAAAGTTTTT	-176207265	False	NA	-4	True	AATAAA	-38	NA	176207286	175944830	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_175945171_175947194_175947240_175986942_175987104_175988287_175988413_175989361_175989480_176027571_176027689_176043185_176043268_176043709_176043819_176046180_176046325_176081151_176081288_176085775_176085891_176116623_176116682_176135009_176135087_176136487_176136548_176149005_176149075_176162868_176162989_176163814_176163892_176175909_176176008_176184632_176184693_176206571
transcript_172905.known	chr6	-	4558	15	FSM	ENSG00000135341.18	ENST00000369327.7	4558	15	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	98.192672946652	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAAAGTGGTGAATGACT	-90586755	False	NA	-8	True	AATAAA	-27	NA	90586889	90513572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_90516682_90519257_90519320_90523677_90523784_90536336_90536402_90547257_90547388_90548046_90548178_90550467_90550550_90552048_90552180_90553457_90553587_90556499_90556625_90560075_90560215_90561621_90561668_90568557_90568624_90571696_90571808_90586763
transcript_172921.known	chr6	-	6620	17	FSM	ENSG00000135333.15	ENST00000680224.1	6620	17	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_8	10.4490953555798	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGACAATGTAAAGAAAATC	-93417956	True	NA	NA	False	AATAAA	-10	NA	93419588	93240037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_93243541_93245297_93245454_93246791_93246986_93254646_93254797_93255827_93256038_93257461_93257524_93258098_93258285_93259353_93259468_93263859_93263916_93264593_93264703_93269476_93269661_93272297_93272423_93356716_93357053_93358255_93358412_93410500_93411171_93414702_93414768_93419244
transcript_172923.known	chr6	-	6621	17	FSM	ENSG00000135333.15	ENST00000369303.9	6621	17	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_10	8.35164654424503	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTCTCCAATCATTGGT	-93417927	True	NA	NA	False	AATAAA	-28	NA	93419559	93240019	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_93243541_93245297_93245454_93246791_93246986_93254646_93254797_93255827_93256038_93257461_93257524_93258098_93258285_93259353_93259480_93263859_93263916_93264593_93264703_93269476_93269661_93272297_93272423_93356716_93357053_93358255_93358412_93410500_93411171_93414702_93414768_93419244
transcript_172925.known	chr6	-	1885	3	FSM	ENSG00000135333.15	ENST00000369297.1	1885	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTCTCTTTTTAACTT	-93417915	True	NA	NA	False	AATAAA	-17	NA	93419547	93409653	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_93411171_93414702_93414768_93419244
transcript_172927.known	chr6	+	4578	5	FSM	ENSG00000172469.17	ENST00000358812.9	4578	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	9.01041064547005	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGATATTAAAGTCTAT	95575932	True	NA	-29	True	AATAAA	-23	NA	95577534	95609452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_95577639_95586401_95586984_95596736_95596847_95604826_95604904_95605747
transcript_172931.known	chr6	+	12793	3	FSM	ENSG00000172461.11	ENST00000302103.6	12793	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	4	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTAGCTAGTGCTGGTTAT	96014765	True	NA	13	True	AATAAA	-20	NA	96015973	96215612	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_96016213_96114038_96114128_96203147
transcript_172935.known	chr6	+	4226	19	FSM	ENSG00000014123.10	ENST00000369278.5	4226	19	0	0	0	0	multi-exon	TRUE	canonical	3	68	junction_11	15.9494765578415	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATAGTACTTTGAAGCT	96520616	True	NA	67	True	AATAAA	-19	NA	96521805	96555276	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_96521951_96523145_96523292_96524381_96524411_96525296_96525395_96526320_96526436_96528501_96528633_96534262_96534322_96536243_96536391_96537373_96537550_96538630_96538811_96540534_96540656_96542893_96543017_96548163_96548282_96549411_96549579_96549668_96549800_96551432_96551514_96551837_96551924_96552481_96552663_96553284
transcript_172936.nic	chr6	+	1403	12	ISM	ENSG00000014123.10	ENST00000369278.5	4226	19	6	12321	6	-12321	5prime_fragment	FALSE	canonical	3	68	junction_11	13.5127732654076	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTCAAGAAGAAAGGAAGAAA	96520622	True	NA	NA	False	ATTAAA	-4	NA	96521811	96542955	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_96521951_96523145_96523292_96524381_96524411_96525296_96525395_96526320_96526436_96528501_96528633_96534262_96534322_96536243_96536391_96537373_96537550_96538630_96538811_96540534_96540656_96542893
transcript_172937.nic	chr6	+	1369	11	ISM	ENSG00000014123.10	ENST00000369278.5	4226	19	-47	14646	-47	-14646	5prime_fragment	FALSE	canonical	3	75	junction_10	11.8663389467856	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGAGCGAAGAAGGAAAGC	96520569	True	NA	NA	False	AGTAAA	-13	NA	96521758	96540630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_96521951_96523145_96523292_96524381_96524411_96525296_96525395_96526320_96526436_96528501_96528633_96534262_96534322_96536243_96536391_96537373_96537550_96538630_96538811_96540534
transcript_17294.nic	chr1	-	2963	19	NIC	ENSG00000143207.21	novel	2826	20	NA	NA	-236	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_17	83.4657651412679	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAGCTTGGAAAGTTTT	NA	False	NA	-5	True	AATAAA	-37	NA	176207522	175944831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_175945171_175947194_175947240_175986942_175987104_175988287_175988413_175989361_175989480_176027571_176027689_176043185_176043268_176043709_176043819_176046180_176046325_176081151_176081288_176085775_176085891_176116623_176116682_176135009_176135087_176136487_176136548_176149005_176149075_176162868_176162989_176163814_176163892_176184632_176184693_176206571
transcript_172942.known	chr6	-	5967	2	FSM	ENSG00000112218.9	ENST00000229955.4	5967	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTGGAGTTTTTTTTAA	-96836229	True	NA	-1	True	AATAAA	-18	NA	96837477	96794124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_96799882_96837267
transcript_172946.known	chr6	-	2407	3	FSM	ENSG00000123545.6	ENST00000316149.8	2407	3	0	0	0	0	multi-exon	FALSE	canonical	3	990	junction_1	79.5	321	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATCAGTCCTATACTGCG	-96882407	True	NA	-3	True	AATAAA	-19	NA	96897891	96889314	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_96891392_96896743_96896848_96897665
transcript_172948.known	chr6	+	3698	11	FSM	ENSG00000186231.17	ENST00000369261.9	3698	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	1.92093727122985	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTCACTAACTTCATATA	96924713	True	NA	NA	False	AATAAA	-21	NA	96924727	97140753	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_96925027_96966995_96967084_96975996_96976178_97041491_97041600_97064627_97064727_97085125_97085342_97113782_97114510_97127403_97127463_97130756_97130950_97132652_97132748_97139120
transcript_172950.known	chr6	-	8574	25	FSM	ENSG00000146263.12	ENST00000683635.1	8574	25	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_12	16.5023146524628	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGCCCTTGATTATTG	-97281005	True	NA	-1	True	AATAAA	-18	NA	97283216	97142160	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_97146888_97149852_97150021_97151770_97151868_97162001_97162166_97165245_97165458_97168070_97168241_97173062_97173223_97178442_97178586_97179407_97179560_97181903_97182055_97186496_97186691_97228893_97229404_97231425_97231653_97233860_97233981_97246627_97246691_97254556_97254734_97263334_97263449_97267871_97268003_97269901_97269993_97272703_97272882_97272974_97273063_97278848_97278899_97281236_97281363_97282313_97282554_97283095
transcript_172953.nnic	chr6	-	2511	10	NNC	ENSG00000146263.12	novel	5907	7	NA	NA	-36	-1181	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	16.2123257484187	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAGGAAATTCAGTAAAG	-97281042	True	NA	NA	False	AAAAAG	-12	NA	97283253	97260843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_97262179_97263334_97263449_97267871_97268003_97269901_97269993_97272703_97272882_97272974_97273063_97278848_97278899_97281236_97281363_97282313_97282554_97283095
transcript_17296.nnic	chr1	-	2751	19	NIC	ENSG00000143207.21	novel	2826	20	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_14	87.4423443203973	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAGCTTGGAAAGTTTT	-176206011	True	NA	-5	True	AATAAA	-37	NA	176207281	175944831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_175945171_175947194_175947240_175986942_175987104_175988287_175988413_175989361_175989480_176027571_176027689_176043185_176043268_176043709_176043819_176046180_176046325_176081151_176081288_176085775_176085891_176116623_176116682_176135009_176135087_176136487_176136548_176162868_176162989_176163814_176163892_176175909_176176008_176184632_176184693_176206571
transcript_17297.known	chr1	-	2124	19	FSM	ENSG00000143207.21	ENST00000308769.12	2124	19	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_13	93.3279098953368	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGTTAACTCAAGTCAAAT	-176206957	False	NA	NA	False	ATTAAA	-44	NA	176206978	175945152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_175945171_175947194_175947240_175986942_175987104_175988287_175988413_175989361_175989480_176027571_176027689_176043185_176043268_176043709_176043819_176046180_176046325_176081151_176081288_176085775_176085891_176116623_176116682_176135009_176135087_176149005_176149075_176162868_176162989_176163826_176163892_176175909_176176008_176184632_176184693_176206571
transcript_172982.nnic	chr6	-	1905	2	Antisense	novelGene_ENSG00000271860.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGACACTCAATTGTTCA	-97781240	False	NA	-25	True	AATAAA	-34	NA	97781339	97773963	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr6_-_97775730_97781200
transcript_172984.nnic	chr6	-	2294	2	Antisense	novelGene_ENSG00000271860.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGACACTCAATTGTTCA	-97782410	False	NA	-25	True	AATAAA	-34	NA	97782509	97773963	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr6_-_97775730_97781981
transcript_172986.known	chr6	-	8058	10	FSM	ENSG00000112234.9	ENST00000369244.7	8058	10	0	0	0	0	multi-exon	TRUE	canonical	3	38	junction_8	11.8769410369447	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCACTTTCAAAATTGATC	-98946027	True	NA	1	True	AATAAA	-22	NA	98947946	98868534	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_98874442_98875414_98875728_98880552_98880625_98899267_98899482_98905425_98905671_98917373_98917720_98926476_98927061_98927704_98927823_98934761_98934880_98947805
transcript_172992.known	chr6	-	2810	9	FSM	ENSG00000112234.9	ENST00000229971.2	2810	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_8	16.8295684733745	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCTAGCGACACAGGAGG	-98946087	True	NA	NA	False	NA	NA	NA	98948006	98873724	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_98874442_98875414_98875728_98880552_98880625_98899267_98899482_98905425_98905671_98917373_98917720_98926476_98927061_98927704_98927823_98947805
transcript_1730.nic	chr1	-	3588	5	ISM	ENSG00000227372.12	ENST00000636630.1	2529	6	-364	-445	-14	0	intron_retention	FALSE	canonical	3	55	junction_3	65.2897388568832	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGCTGAAAGCACTC	-3741589	True	NA	-16	True	TTTAAA	-19	NA	3747387	3737148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_3738514_3740232_3740388_3742803_3742961_3743060_3743191_3745606
transcript_17300.known	chr1	-	2034	18	FSM	ENSG00000143207.21	ENST00000367667.5	2034	18	0	0	0	0	multi-exon	TRUE	canonical	3	3	junction_15	85.7383563170221	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGCTTGGAAAGTTTTT	-176206670	False	NA	-4	True	AATAAA	-38	NA	176206691	175944830	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_175945171_175947194_175947240_175986942_175987104_175988287_175988413_175989361_175989480_176027571_176027689_176043185_176043268_176043709_176043819_176046180_176046325_176081151_176081288_176085775_176085891_176116623_176116682_176135009_176135087_176136487_176136548_176149005_176149075_176175909_176176008_176184632_176184693_176206571
transcript_173009.nnic	chr6	-	2264	7	NNC	ENSG00000146267.12	novel	11528	6	NA	NA	72	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	30.2416195921375	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGAACACCTACTATGTG	-99349945	True	NA	-41	True	AATAAA	-14	NA	99349990	99280666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_99281454_99291703_99291821_99323443_99323668_99333350_99333548_99342897_99343034_99349106_99349415_99349495
transcript_173018.known	chr6	-	1325	7	FSM	ENSG00000132423.12	ENST00000254759.8	1325	7	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_3	32.1683937360191	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCGTGATCTAGGAGTGTA	-99391385	True	NA	-7	True	AATAAA	-17	NA	99394195	99369400	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_99369821_99371427_99371588_99375939_99376183_99377385_99377486_99380188_99380342_99383697_99383825_99394073
transcript_173029.known	chr6	-	2862	12	FSM	ENSG00000132424.17	ENST00000681611.1	2862	12	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_1	223.265990422498	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATCTAAAGGAAATAAATCA	-99412921	True	NA	-48	True	NA	NA	NA	99425315	99398988	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_99400312_99402539_99402711_99403828_99403883_99404602_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99416348_99416429_99425214
transcript_173030.known	chr6	-	5073	12	FSM	ENSG00000132424.17	ENST00000481229.2	5073	12	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_9	219.368854249814	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGGTGTGGAATCTCG	-99412898	True	NA	-22	True	TATAAA	-3	NA	99425292	99398068	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_99401631_99402539_99402711_99403828_99403883_99404602_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412735_99414571_99414691_99416348_99416429_99425214
transcript_173031.known	chr6	-	5025	12	FSM	ENSG00000132424.17	ENST00000679525.1	5025	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	226.06347386271	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGCCCCAAAATATAAATAAA	-99412921	True	NA	-40	True	AATAAA	-38	NA	99425315	99398086	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_99401631_99402539_99402711_99403828_99403883_99404602_99404703_99406030_99406169_99408080_99408272_99409172_99409287_99410740_99410965_99412550_99412740_99414571_99414691_99416348_99416429_99425214
transcript_173036.known	chr6	-	2422	11	FSM	ENSG00000132424.17	ENST00000478777.5	2422	11	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_5	76.6234950912578	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAGAAAAACAAGG	-99412914	True	NA	91	True	AAAAAG	-6	NA	99425308	99401460	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_99401631_99402539_99402711_99403828_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99416348_99416429_99425214
transcript_173038.known	chr6	-	3142	11	FSM	ENSG00000132424.17	ENST00000438806.5	3142	11	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_10	211.324489825481	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	-99412937	True	NA	-12	True	AATAAA	-25	NA	99425331	99399963	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_99401631_99402539_99402711_99403828_99403883_99404602_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99425214
transcript_173047.nic	chr6	-	1519	11	ISM	ENSG00000132424.17	ENST00000681611.1	2862	12	-14	3585	0	-1112	5prime_fragment	FALSE	canonical	3	572	junction_2	94.1439854690675	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAGCAGCTATTACATGA	-99412935	True	NA	-34	True	AAGAAA	-3	NA	99425329	99402573	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_99402711_99403828_99403883_99404602_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99416348_99416429_99425214
transcript_173057.nic	chr6	-	3562	10	NIC	ENSG00000132424.17	novel	2422	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	618	junction_4	80.7622635262072	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAGAAAAACAAGGA	-99412935	True	NA	92	True	AAAAAG	-7	NA	99425329	99401459	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_99401631_99402539_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99416348_99416429_99425214
transcript_17307.nnic	chr1	-	2766	17	NIC	ENSG00000143207.21	novel	2826	20	NA	NA	-236	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_15	81.2195135112246	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAGCTTGGAAAGTTTT	NA	False	NA	-5	True	AATAAA	-37	NA	176207522	175944831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_175945171_175947194_175947240_175986942_175987104_175988287_175988413_175989361_175989480_176027571_176027689_176043185_176043268_176043709_176043819_176046180_176046325_176081151_176081288_176085775_176085891_176116623_176116682_176135009_176135087_176136487_176136548_176149005_176149075_176184632_176184693_176206571
transcript_173078.nic	chr6	-	1018	7	ISM	ENSG00000132424.17	ENST00000478777.5	2422	11	-21	6692	0	0	5prime_fragment	FALSE	canonical	3	618	junction_1	96.0632025746013	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAAAAAAGGCCAC	-99412935	True	NA	5	True	AAGAAA	-43	NA	99425329	99408152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99416348_99416429_99425214
transcript_173083.nic	chr6	-	966	7	ISM	ENSG00000132424.17	ENST00000478777.5	2422	11	-21	6744	0	-52	5prime_fragment	FALSE	canonical	3	618	junction_1	96.0632025746013	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAGAAGAAATTGGAGAAAG	-99412935	True	NA	-47	True	NA	NA	NA	99425329	99408204	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99416348_99416429_99425214
transcript_173085.nic	chr6	-	924	6	ISM	ENSG00000132424.17	ENST00000438806.5	3142	11	16	8189	0	0	5prime_fragment	FALSE	canonical	3	100	junction_5	278.646729749337	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAAAAAAGGCCAC	-99412921	True	NA	5	True	AAGAAA	-43	NA	99425315	99408152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99425214
transcript_173088.nic	chr6	-	865	6	ISM	ENSG00000132424.17	ENST00000438806.5	3142	11	23	8241	0	-52	5prime_fragment	FALSE	canonical	3	100	junction_5	278.646729749337	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAGAAGAAATTGGAGAAAG	-99412914	True	NA	-47	True	NA	NA	NA	99425308	99408204	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99425214
transcript_173091.known	chr6	-	1027	5	FSM	ENSG00000132424.17	ENST00000498075.1	1027	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	338.893419823991	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGAGGTGGGAGGATTGC	-99412876	True	NA	NA	False	NA	NA	NA	99425270	99411735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_99412319_99412550_99412740_99414571_99414691_99416348_99416429_99425214
transcript_173100.known	chr6	+	2588	2	FSM	ENSG00000228506.3	ENST00000418945.3	2600	2	9	3	9	-3	multi-exon	FALSE	canonical	3	16	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTGATGGTATTTTATT	99424544	True	NA	NA	False	AATAAA	-19	NA	99424921	99432323	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_99425899_99430712
transcript_173101.known	chr6	-	5243	12	FSM	ENSG00000132424.17	ENST00000681615.1	5243	12	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_11	201.824447077198	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCATGATATTACAGTT	-99412935	True	NA	NA	False	AATACA	-2	NA	99425329	99397628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_99400312_99400543_99401631_99402539_99402711_99403828_99403883_99404602_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99425214
transcript_173105.known	chr6	-	5878	18	FSM	ENSG00000123552.18	ENST00000500704.7	5878	18	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	35.4342316847213	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGGTGTATTAACAAAAAT	-99510849	True	NA	-2	True	AATAAA	-14	NA	99515423	99432324	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_99435847_99437245_99437400_99439768_99439856_99443564_99443663_99445796_99446464_99464603_99464748_99465079_99465137_99466671_99466764_99468536_99468619_99476142_99476231_99482752_99482884_99488199_99488296_99488680_99488821_99503764_99503866_99507427_99507532_99508609_99508783_99510120_99510231_99515391
transcript_173120.known	chr6	-	2186	13	FSM	ENSG00000112237.13	ENST00000520371.5	2186	13	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	449.835425152602	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTGATGCACAATTTAAG	-99568324	False	389	-45	True	AATAAA	-16	NA	99568713	99542501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_99543610_99544178_99544274_99545111_99545231_99546394_99546475_99549507_99549576_99550217_99550310_99550992_99551029_99551839_99551896_99558496_99558549_99561366_99561437_99561596_99561682_99562841_99562949_99568495
transcript_173125.known	chr6	-	2153	12	FSM	ENSG00000112237.13	ENST00000520429.6	2153	12	0	0	0	0	multi-exon	FALSE	canonical	3	1180	junction_7	91.1844919394078	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGACTAGTGTCTTGAATTT	-99558775	True	NA	-20	True	AATAAA	-20	NA	99568660	99542386	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_99543610_99545111_99545231_99546394_99546475_99549507_99549576_99550217_99550310_99550992_99551029_99551839_99551896_99558496_99558549_99561366_99561437_99561596_99561682_99562841_99562949_99568495
transcript_173126.known	chr6	-	1035	12	FSM	ENSG00000112237.13	ENST00000523799.5	1035	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_11	389.0956456806	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATATTGGAAAGTGATT	NA	False	NA	NA	False	AATGAA	-22	NA	99568825	99543447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_99543610_99545111_99545231_99546394_99546475_99549507_99549576_99550217_99550310_99550992_99551029_99551839_99551896_99558496_99558549_99561366_99561437_99561596_99561682_99562841_99562949_99568717
transcript_173129.known	chr6	-	1426	12	FSM	ENSG00000112237.13	ENST00000518714.5	1426	12	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	349.077035709174	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTTAGTCTTCTGGAT	-99558777	True	NA	NA	False	AATAAA	-14	NA	99568662	99543779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_99544274_99545111_99545231_99546394_99546475_99549507_99549576_99550217_99550310_99550992_99551029_99551839_99551896_99558496_99558549_99561366_99561437_99561596_99561682_99562841_99562949_99568495
transcript_173130.known	chr6	-	958	11	FSM	ENSG00000112237.13	ENST00000523985.5	958	11	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_10	398.020715541289	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAAATGAATAGCTTGT	-99558775	True	NA	NA	False	AATAAA	-40	NA	99568660	99543474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_99543610_99545111_99545231_99546394_99546475_99549507_99549576_99550217_99550310_99550992_99551029_99551839_99551896_99558496_99558549_99561366_99561437_99561596_99561682_99568495
transcript_173144.known	chr6	-	1617	8	FSM	ENSG00000123552.18	ENST00000472914.6	1617	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	42.4898547314773	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTGAAAAGCTGAGAATCA	-99510802	True	NA	NA	False	ATTAAA	-16	NA	99515376	99482513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_99482884_99488199_99488296_99488680_99488821_99503764_99503866_99507427_99507532_99508609_99508783_99510120_99510231_99514853
transcript_173145.known	chr6	-	1444	8	FSM	ENSG00000123552.18	ENST00000329966.10	1444	8	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_3	16.4527771987291	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTAATGCATTCATGTAT	-99510915	True	NA	-5	True	AATAAA	-21	NA	99515489	99482261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_99482884_99488199_99488296_99488680_99488821_99503764_99503866_99507427_99507532_99508609_99508783_99510120_99510231_99515391
transcript_173151.known	chr6	-	1704	5	FSM	ENSG00000112237.13	ENST00000482541.2	1704	5	0	0	0	0	multi-exon	FALSE	canonical	3	1272	junction_1	34.6148450812654	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGGAAATAAATAGTATAA	-99558743	True	NA	NA	False	CATAAA	-13	NA	99568628	99557239	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_99558549_99561366_99561437_99561596_99561682_99562841_99562949_99568495
transcript_173153.known	chr6	+	1873	4	FSM	ENSG00000279170.3	ENST00000452647.3	1873	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_3	6.0184900284226	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAAATAAAAAT	99519774	True	NA	NA	False	NA	NA	NA	99521048	99533185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_99521148_99526063_99526110_99531362_99531537_99531631
transcript_173157.known	chr6	-	8111	42	FSM	ENSG00000112249.14	ENST00000369162.7	8111	42	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_25	65.6298183126763	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGGTTGCAGGGGAACCA	-100870383	True	NA	-15	True	AATAAA	-18	NA	100881329	100508193	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_100509534_100509931_100510108_100512708_100512919_100516179_100516328_100517990_100518143_100540162_100540388_100589633_100589769_100589947_100590060_100601809_100601936_100605567_100605701_100606739_100606861_100606950_100607089_100625191_100625335_100627589_100627711_100627841_100627988_100629014_100629182_100631127_100631214_100638600_100638822_100642580_100642750_100644030_100644130_100646614_100646770_100647225_100647452_100650537_100650715_100651559_100651647_100652724_100652890_100655698_100655819_100661805_100662031_100662344_100662537_100679617_100679753_100715461_100715534_100718074_100718252_100725538_100725704_100766564_100766706_100767144_100767346_100798712_100798839_100799430_100799573_100800299_100800505_100805759_100805881_100848147_100848708_100864063_100864215_100867907_100868039_100881060
transcript_173159.nic	chr6	-	3772	21	ISM	ENSG00000112249.14	ENST00000369162.7	8111	42	-46	139094	-3	0	5prime_fragment	FALSE	canonical	3	146	junction_4	87.4918710509725	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGATTAGAAGAAAAAAAGC	-100870429	True	NA	NA	False	NA	NA	NA	100881375	100647287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_100647452_100650537_100650715_100651559_100651647_100652724_100652890_100655698_100655819_100661805_100662031_100662344_100662537_100679617_100679753_100715461_100715534_100718074_100718252_100725538_100725704_100766564_100766706_100767144_100767346_100798712_100798839_100799430_100799573_100800299_100800505_100805759_100805881_100848147_100848708_100864063_100864215_100867907_100868039_100881060
transcript_173161.nic	chr6	-	1467	6	ISM	ENSG00000112249.14	ENST00000522650.5	2828	13	-86	85261	-78	47613	5prime_fragment	FALSE	canonical	3	270	junction_3	27.2205804493585	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTGCCAGACGAGAAAAA	-100881436	False	NA	NA	False	AAGAAA	-37	NA	100881450	100800390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_100800505_100805759_100805881_100848147_100848708_100864063_100864215_100867907_100868039_100881060
transcript_173162.nic	chr6	-	1267	5	ISM	ENSG00000112249.14	ENST00000522650.5	2828	13	0	90630	0	42244	5prime_fragment	FALSE	canonical	3	270	junction_2	30.1662062579967	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAAAGTATGCAGTGGT	-100870418	True	NA	NA	False	NA	NA	NA	100881364	100805759	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_100805881_100848147_100848708_100864063_100864215_100867907_100868039_100881060
transcript_173163.known	chr6	-	852	4	FSM	ENSG00000112249.14	ENST00000324723.10	852	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	140.292551477261	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACTTTGACGAACTGCCA	-100870402	True	NA	NA	False	NA	NA	NA	100881348	100848419	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_100848708_100864063_100864215_100867907_100868033_100881060
transcript_173164.known	chr6	-	3433	4	FSM	ENSG00000112249.14	ENST00000369143.2	3433	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	137.18114544888	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTATTTTTATATTTGTG	-100870365	True	NA	-5	True	AATAAA	-20	NA	100881311	100856302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_100859203_100864063_100864215_100867907_100868039_100881060
transcript_173166.nic	chr6	-	518	3	ISM	ENSG00000112249.14	ENST00000369143.2	3433	4	-70	7846	-9	-7846	5prime_fragment	FALSE	canonical	3	342	junction_1	1	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTGAATGAAAAACTGGA	-100870435	True	NA	NA	False	AATAAA	-2	NA	100881381	100864148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_100864215_100867907_100868039_100881060
transcript_173168.known	chr6	+	1517	1	FSM	ENSG00000260000.2	ENST00000565695.2	1517	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAACTTTATTTTTACTT	100881300	True	NA	NA	False	AATAAA	-16	NA	100881470	100882987	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_100881500_100883000
transcript_173172.known	chr6	-	4575	24	FSM	ENSG00000085382.12	ENST00000262903.9	4575	24	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_18	14.2461482871966	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTGGCTTATGTCTGT	NA	False	NA	-8	True	AATAAA	-16	NA	104859919	104728093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_104729765_104730302_104730417_104744159_104744231_104744511_104744611_104750340_104750473_104771192_104771390_104771924_104772075_104776740_104776829_104777012_104777111_104777205_104777318_104784085_104784174_104784416_104784486_104784984_104785320_104791503_104791655_104795578_104795686_104796654_104796757_104796928_104797026_104811310_104811394_104833041_104833174_104843222_104843299_104849141_104849247_104850906_104850997_104852316_104852372_104859566
transcript_17318.nnic	chr1	-	2706	16	NIC	ENSG00000143207.21	novel	2124	19	NA	NA	-236	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_14	104.632181155385	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAGCTTGGAAAGTTTT	NA	False	NA	-5	True	AATAAA	-37	NA	176207522	175944831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_175945171_175947194_175947240_175986942_175987104_175988287_175988413_175989361_175989480_176027571_176027689_176043185_176043268_176043709_176043819_176046180_176046325_176081151_176081288_176085775_176085891_176116623_176116682_176135009_176135087_176149005_176149075_176184632_176184693_176206571
transcript_173186.known	chr6	+	2635	5	FSM	ENSG00000187772.8	ENST00000637759.1	2635	5	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	102.150318159074	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGACGAAAATGCCTCAG	104940855	False	NA	96	True	NA	NA	NA	104940865	105080479	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_104941013_104950460_104950510_104958098_104958287_105026297_105026483_105078413
transcript_173191.nic	chr6	+	994	4	ISM	ENSG00000187772.8	ENST00000637759.1	2635	5	-439	54011	-439	-52134	5prime_fragment	FALSE	canonical	3	114	junction_1	77.5986826921408	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAGGGAGATAGGTAATC	NA	False	NA	NA	False	AAGAAA	-2	NA	104940426	105026468	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_104941013_104950460_104950510_104958098_104958287_105026297
transcript_173198.known	chr6	+	5446	4	FSM	ENSG00000187772.8	ENST00000345080.5	5446	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	122.453619337645	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGTTTTGGAGATTTT	104955862	True	NA	15	True	AATAAA	-21	NA	104957106	105083332	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_104957261_104958098_104958287_105026297_105026483_105078413
transcript_1732.known	chr1	-	2307	5	FSM	ENSG00000227372.12	ENST00000650039.1	2307	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	73.1893947235527	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTCTCACGCTATACT	-3741079	False	NA	25	True	NA	NA	NA	3746877	3737211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3737855_3740232_3740388_3742803_3742912_3743060_3743191_3745606
transcript_173200.known	chr6	-	5550	8	FSM	ENSG00000112276.14	ENST00000314641.10	5550	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	2.1189138534559	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTATTTTTTATTTCA	-105136936	True	NA	4	True	AATAAA	-17	NA	105137157	105096821	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_105101214_105115685_105115828_105116700_105116869_105124546_105124656_105125390_105125579_105129378_105129504_105133351_105133589_105136968
transcript_173201.known	chr6	-	1029	4	FSM	ENSG00000132429.10	ENST00000474760.1	1029	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	3.39934634239519	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGCGAGATGCCATTGC	-105179714	True	NA	-80	True	TATAAA	-8	NA	105179995	105158359	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_105158752_105159710_105159820_105161795_105162161_105179832
transcript_173202.known	chr6	-	1879	4	FSM	ENSG00000132429.10	ENST00000254765.4	1879	4	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_2	8.52447456836295	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATTTCCTGGAAAACAAAG	-105179733	True	NA	NA	False	AATAAA	-18	NA	105180014	105157899	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_105158752_105159710_105159820_105161424_105162161_105179832
transcript_173213.known	chr6	-	7250	15	FSM	ENSG00000085377.15	ENST00000652536.2	7250	15	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_7	33.0728941359932	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCCTTTCTGGATGAGTG	-105396897	True	NA	NA	False	AATAAA	-16	NA	105403082	105273217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_105278439_105281745_105281903_105282450_105282583_105285485_105285581_105288757_105288895_105323664_105323769_105328828_105329027_105333313_105333506_105352971_105353078_105368902_105369025_105373368_105373579_105376124_105376256_105377385_105377520_105397852_105397928_105402846
transcript_173221.nic	chr6	-	2853	11	NIC	ENSG00000085377.15	novel	961	2	NA	NA	-488	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	107.332939957871	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGCTGCTTATTTTG	-105403518	True	NA	0	True	AATAAA	-28	NA	105403570	105322254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_105323112_105323664_105323769_105328828_105329027_105333313_105333506_105352971_105353078_105368902_105369025_105373368_105373579_105376124_105376256_105377385_105377520_105397852_105397928_105402846
transcript_173227.known	chr6	-	3092	8	FSM	ENSG00000057663.16	ENST00000343245.7	3092	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_7	132.717438068051	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTCCGTCTTTATTT	-106319368	False	53	NA	False	AATAAA	-1	NA	106325417	106184475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_106186677_106201971_106202090_106248149_106248245_106279660_106279824_106293027_106293107_106308363_106308492_106316100_106316267_106325275
transcript_173228.known	chr6	-	3185	8	FSM	ENSG00000057663.16	ENST00000369076.8	3185	8	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_5	50.2008211982592	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTCCGTCTTTATTT	-106319711	True	NA	NA	False	AATAAA	-1	NA	106325760	106184475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_106186677_106201971_106202090_106248149_106248245_106279660_106279824_106293027_106293107_106308363_106308492_106316100_106316267_106325525
transcript_173236.known	chr6	-	3035	7	FSM	ENSG00000057663.16	ENST00000635758.2	3035	7	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_5	122.463259796561	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTCCGTCTTTATTT	-106319689	True	NA	NA	False	AATAAA	-1	NA	106325738	106184475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_106186677_106201971_106202090_106248149_106248245_106279660_106279824_106293027_106293107_106316100_106316267_106325525
transcript_17324.nnic	chr1	-	2385	15	NIC	ENSG00000143207.21	novel	2124	19	NA	NA	16	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_13	89.0454195042838	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAGCTTGGAAAGTTTT	-176206000	True	NA	-5	True	AATAAA	-37	NA	176207270	175944831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_175945171_175947194_175947240_175986942_175987104_175988287_175988413_175989361_175989480_176027571_176027689_176043185_176043268_176043709_176043819_176046180_176046325_176081151_176081288_176085775_176085891_176116623_176116682_176135009_176135087_176184632_176184693_176206571
transcript_173244.nic	chr6	+	2298	4	ISM	ENSG00000112297.18	ENST00000633556.3	10039	22	-45	52748	-45	6230	5prime_fragment	FALSE	canonical	3	23	junction_2	2.94392028877595	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGACAAACAGTAGCCCAAG	106359648	True	NA	NA	False	AAAACA	-3	NA	106360671	106519269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_106361082_106451693_106451833_106511429_106513040_106519130
transcript_173245.nic	chr6	+	2471	4	ISM	ENSG00000112297.18	ENST00000633556.3	10039	22	-113	52643	-113	6335	5prime_fragment	FALSE	canonical	3	23	junction_2	2.94392028877595	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAAAGAAATGGAGCAACC	106360591	False	NA	NA	False	AGTAAA	-40	NA	106360603	106519374	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_106361082_106451693_106451833_106511429_106513040_106519130
transcript_17325.nnic	chr1	-	2629	15	NIC	ENSG00000143207.21	novel	2124	19	NA	NA	-236	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_12	110.560007715821	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAGCTTGGAAAGTTTT	NA	False	NA	-5	True	AATAAA	-37	NA	176207522	175944831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_175945171_175947194_175947240_175986942_175987104_175988287_175988413_175989361_175989480_176027571_176027689_176043185_176043268_176043709_176043819_176046180_176046325_176081151_176081288_176085775_176085891_176116623_176116682_176149005_176149075_176184632_176184693_176206571
transcript_173250.known	chr6	-	2893	9	FSM	ENSG00000130347.13	ENST00000369063.8	2893	9	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_7	11.2998893799895	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAAAATCTGAT	-106627024	True	NA	NA	False	NA	NA	NA	106629498	106570770	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_106572104_106583327_106583421_106587678_106587863_106592163_106592301_106602873_106602923_106619201_106619327_106621424_106621494_106622817_106622970_106628747
transcript_173257.known	chr6	+	4106	11	FSM	ENSG00000130348.11	ENST00000369046.8	4106	11	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_10	22.7675207258059	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCAGAACAGAGTGTTTT	106627194	True	NA	10	True	ATTAAA	-24	NA	106629577	106668417	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_106629706_106640348_106640509_106640822_106640922_106642993_106643091_106649024_106649202_106652208_106652385_106652466_106652583_106654729_106654923_106655614_106655733_106662979_106663186_106665781
transcript_173263.known	chr6	+	2158	7	FSM	ENSG00000130348.11	ENST00000369044.1	2158	7	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_2	10.7030629053349	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	106627230	True	NA	NA	False	NA	NA	NA	106629613	106653823	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_106629706_106640348_106640509_106640822_106640922_106642993_106643091_106649024_106649202_106652208_106652385_106652466
transcript_173265.nic	chr6	+	556	5	ISM	ENSG00000130348.11	ENST00000369044.1	2158	7	-36	4727	0	-4727	5prime_fragment	FALSE	canonical	3	172	junction_2	12.5399362039845	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAAGCAGAATCCCCACA	106627194	True	NA	NA	False	AATATA	-8	NA	106629577	106649096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_106629706_106640348_106640509_106640822_106640922_106642993_106643091_106649024
transcript_173268.known	chr6	-	2513	3	FSM	ENSG00000272398.6	ENST00000619133.4	2513	3	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_2	1327.5	1827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCATTTTAAGTTTTTC	-106975404	False	NA	-11	True	AATAAA	-22	NA	106975465	106969830	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_106971835_106974577_106974755_106975133
transcript_173269.known	chr6	-	802	3	FSM	ENSG00000272398.6	ENST00000610952.1	802	3	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_2	1361.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGATGGATGCCAATATT	-106975094	True	NA	NA	False	NA	NA	NA	106975627	106971468	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_106971835_106974577_106974755_106975368
transcript_173278.known	chr6	-	566	2	FSM	ENSG00000272398.6	ENST00000619869.1	566	2	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGACACTTAATACTACCT	-106975398	False	533	-74	True	NA	NA	NA	106975459	106971359	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_106971835_106975368
transcript_173279.known	chr6	-	1026	2	FSM	ENSG00000272398.6	ENST00000615659.1	1026	2	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGAATCTACCCCCAGAT	-106975266	False	533	NA	False	NA	NA	NA	106975327	106971002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_106971835_106975133
transcript_173283.known	chr6	+	1146	5	FSM	ENSG00000130349.10	ENST00000625458.1	1146	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	95.5458005356593	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAATCTGCCGAGCCAT	107028543	False	NA	15	True	AATAAA	-15	NA	107028568	107051335	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_107028798_107030024_107030108_107039748_107040231_107044259_107044333_107051056
transcript_173287.known	chr6	+	1158	4	FSM	ENSG00000130349.10	ENST00000311381.8	1158	4	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	37.8623236946117	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTTTATTTAAAATGTT	107026298	True	NA	22	True	AATAAA	-18	NA	107028198	107051586	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_107028272_107039748_107040231_107044259_107044333_107051056
transcript_173288.known	chr6	+	1420	4	FSM	ENSG00000130349.10	ENST00000405204.6	1420	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	85.2655981168385	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAATCTGCCGAGCCATT	107026312	True	NA	16	True	AATAAA	-16	NA	107028212	107051336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_107028798_107039748_107040231_107044259_107044333_107051056
transcript_173293.nic	chr6	+	1111	3	NIC	ENSG00000130349.10	novel	766	2	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	54.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTATACTAAGATGTTGG	NA	False	NA	NA	False	AAAAAG	-26	NA	107028169	107040907	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_107028272_107039748_107040231_107040380
transcript_1733.known	chr1	-	3831	5	FSM	ENSG00000227372.12	ENST00000647831.1	3831	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	84.6256462309151	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATACACTTTATTATGTTAC	-3741538	True	NA	NA	False	NA	NA	NA	3747336	3736192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3737855_3740232_3740388_3742803_3742958_3743060_3743191_3745606
transcript_173302.known	chr6	-	6446	4	FSM	ENSG00000178409.14	ENST00000369042.6	6446	4	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_3	16.5126214353344	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGTCTCGTAACATGTTA	-107115505	False	NA	-48	True	TATAAA	-21	NA	107115515	107065181	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_107070951_107098550_107098754_107099248_107099297_107115089
transcript_173309.known	chr6	-	3536	8	FSM	ENSG00000164494.12	ENST00000369037.9	3536	8	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_4	14.2112344176524	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTCCAGGTTTGTTTTA	-107458565	True	NA	-5	True	ATTAAA	-17	NA	107459564	107152561	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_107154778_107193821_107193855_107210438_107210571_107212108_107212283_107245547_107245620_107274028_107274228_107334197_107334333_107458989
transcript_17331.known	chr1	-	3685	22	FSM	ENSG00000152092.16	ENST00000424564.2	3685	22	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	4.10740164816149	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTCTTGAAATTTTGTAC	-177164400	True	NA	-1	True	AATAAA	-20	NA	177164683	176868812	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_176869028_176876536_176876638_176882858_176882995_176884338_176884491_176888070_176888205_176894561_176894831_176934151_176934341_176936265_176936371_176943890_176944019_176945925_176946121_176949184_176949352_176957677_176957829_176958344_176958483_176965162_176965238_177014790_177014876_177023403_177023572_177024582_177024733_177029633_177029742_177030805_177030953_177032455_177032850_177061077_177061266_177164393
transcript_173317.known	chr6	-	1236	4	FSM	ENSG00000164494.12	ENST00000369031.4	1236	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	25.4950975679639	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTGTCTTATCTGT	-107458565	True	NA	-4	True	AATAAA	-15	NA	107459564	107264185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_107264513_107274028_107274228_107334197_107334333_107458989
transcript_173321.known	chr6	-	6430	21	FSM	ENSG00000025796.14	ENST00000369002.9	6430	21	0	0	0	0	multi-exon	TRUE	canonical	3	364	junction_6	45.3204975700841	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTCTGATTTGG	-107945397	True	NA	2	True	AATAAA	-19	NA	107958208	107867755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_107871848_107872807_107872913_107876563_107876663_107881148_107881251_107882987_107883147_107893481_107893656_107893837_107893898_107897648_107897732_107901369_107901518_107902843_107902999_107904628_107904722_107906447_107906581_107906682_107906778_107908926_107909036_107911345_107911397_107912715_107912775_107913365_107913428_107921796_107921910_107924817_107924933_107929414_107929515_107957885
transcript_173327.nic	chr6	-	2143	17	ISM	ENSG00000025796.14	ENST00000369002.9	6430	21	-123	15244	-123	-2040	5prime_fragment	FALSE	canonical	3	364	junction_2	36.7074583702005	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATGAAGCAGTAAGCCT	NA	False	NA	NA	False	AAAACA	-8	NA	107958331	107882999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_107883147_107893481_107893656_107893837_107893898_107897648_107897732_107901369_107901518_107902843_107902999_107904628_107904722_107906447_107906581_107906682_107906778_107908926_107909036_107911345_107911397_107912715_107912775_107913365_107913428_107921796_107921910_107924817_107924933_107929414_107929515_107957885
transcript_173329.nic	chr6	-	1927	16	ISM	ENSG00000025796.14	ENST00000369002.9	6430	21	-123	25795	-123	29	5prime_fragment	FALSE	canonical	3	364	junction_1	37.8027629795613	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACACCTGTGCTATTACC	NA	False	NA	NA	False	AAAAAG	-19	NA	107958331	107893550	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_107893656_107893837_107893898_107897648_107897732_107901369_107901518_107902843_107902999_107904628_107904722_107906447_107906581_107906682_107906778_107908926_107909036_107911345_107911397_107912715_107912775_107913365_107913428_107921796_107921910_107924817_107924933_107929414_107929515_107957885
transcript_173331.nic	chr6	-	1726	16	ISM	ENSG00000025796.14	ENST00000369002.9	6430	21	3	25870	3	-46	5prime_fragment	FALSE	canonical	3	364	junction_1	37.8027629795613	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGGATGGCAACAGAAGAG	-107945394	True	NA	NA	False	NA	NA	NA	107958205	107893625	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_107893656_107893837_107893898_107897648_107897732_107901369_107901518_107902843_107902999_107904628_107904722_107906447_107906581_107906682_107906778_107908926_107909036_107911345_107911397_107912715_107912775_107913365_107913428_107921796_107921910_107924817_107924933_107929414_107929515_107957885
transcript_173334.known	chr6	-	482	3	FSM	ENSG00000025796.14	ENST00000460009.1	482	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTGGTTATTGGTGCA	-107957920	False	NA	NA	False	AATAAA	-28	NA	107958042	107954583	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_107954767_107955964_107956107_107957885
transcript_173335.nic	chr6	-	546	2	ISM	ENSG00000025796.14	ENST00000484803.5	724	7	-400	18247	-123	-4597	5prime_fragment	FALSE	canonical	3	401	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAATGGATTTCAAGA	NA	False	NA	NA	False	ATTAAA	-31	NA	107958331	107929414	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_107929515_107957885
transcript_173337.known	chr6	-	4471	6	FSM	ENSG00000081087.15	ENST00000193322.8	4471	6	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_4	18.8297636735037	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACTGATCCATGCTTCT	-108070280	True	NA	50	True	ATTAAA	-20	NA	108074741	108041408	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_108044841_108049252_108049419_108051030_108051199_108054489_108054588_108064184_108064300_108074249
transcript_173344.known	chr6	-	1535	4	FSM	ENSG00000112335.15	ENST00000230085.13	1535	4	0	0	0	0	multi-exon	FALSE	canonical	3	879	junction_1	47.7516724547133	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCATTTCTCCTATTTTTC	-108254386	True	NA	NA	False	ATTAAA	-20	NA	108261040	108211221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_108212255_108214497_108214623_108222949_108223046_108260759
transcript_173345.known	chr6	-	890	4	FSM	ENSG00000112335.15	ENST00000349379.5	890	4	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	405.267264352249	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCAGTTGACAAGAAGTTA	-108261089	False	NA	NA	False	NA	NA	NA	108261244	108212004	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_108212255_108214497_108214623_108222949_108223046_108260825
transcript_173348.known	chr6	-	1072	3	FSM	ENSG00000112335.15	ENST00000426155.6	1072	3	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_2	435.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTGTGTTGCCTCCAGC	-108260809	False	NA	-4	True	AATAAA	-26	NA	108260964	108211512	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_108212255_108214497_108214623_108260759
transcript_17335.known	chr1	+	4097	8	FSM	ENSG00000198797.7	ENST00000361539.5	4097	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.49829835452879	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGAAAAGGCCTTTTT	177170882	True	NA	NA	False	AGTAAA	-21	NA	177170957	177282422	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_177171733_177229800_177230146_177255918_177256110_177257175_177257385_177273487_177273594_177276197_177276435_177278562_177278786_177280411
transcript_173351.known	chr6	+	5048	13	FSM	ENSG00000135537.17	ENST00000368977.9	5048	13	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	6.0063623674308	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACTTGCTGGTAGGAAAG	108294658	True	NA	NA	False	NA	NA	NA	108295053	108526001	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_108295219_108323824_108324049_108346987_108347040_108355653_108355756_108356689_108356821_108366232_108366333_108401995_108402055_108447213_108447297_108476864_108476936_108477191_108477293_108510211_108510353_108519696_108519811_108522296
transcript_173361.known	chr6	+	7308	4	FSM	ENSG00000118689.15	ENST00000343882.10	7308	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	32.4995726467629	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAAGAAGTCTCTTTGTT	108559274	False	NA	8	True	AATAAA	-23	NA	108559834	108684774	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_108560016_108561085_108561830_108663454_108664890_108679826
transcript_173364.nic	chr6	+	3382	3	ISM	ENSG00000118689.15	ENST00000343882.10	7308	4	-73	18936	-73	-14913	5prime_fragment	FALSE	canonical	3	17	junction_1	24	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATTTGAAAACACAGGTG	108559201	True	NA	NA	False	AAAAAG	-9	NA	108559761	108665838	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_108560016_108561085_108561830_108663454
transcript_173365.known	chr6	+	7296	3	FSM	ENSG00000118689.15	ENST00000406360.2	7296	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	15.5	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAAGAAGTCTCTTTGTT	108559958	True	NA	8	True	AATAAA	-23	NA	108560916	108684774	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_108561830_108663454_108664890_108679826
transcript_173368.nic	chr6	+	3396	2	ISM	ENSG00000118689.15	ENST00000406360.2	7296	3	-99	18936	-99	-14913	5prime_fragment	FALSE	canonical	3	65	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATTTGAAAACACAGGTG	108560257	False	NA	NA	False	AAAAAG	-9	NA	108560817	108665838	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_108561830_108663454
transcript_173378.known	chr6	-	2676	10	FSM	ENSG00000080546.14	ENST00000356644.7	2676	10	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_9	10.0492613818622	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTTGCTGTCTCAATC	-109005927	True	NA	-5	True	AATAAA	-18	NA	109009555	108986441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_108987631_108988542_108988688_108990644_108990836_108992786_108992900_108994461_108994610_108998512_108998756_109000490_109000674_109001287_109001489_109002277_109002344_109009358
transcript_173379.known	chr6	-	3509	10	FSM	ENSG00000080546.14	ENST00000436639.7	5664	10	27	2128	27	5	multi-exon	FALSE	canonical	3	16	junction_9	50.3641063643201	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGTCTCAATCTCTTA	-109094650	True	NA	0	True	AATAAA	-23	NA	109094819	108986436	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_108987631_108988542_108988688_108990644_108990836_108992786_108992900_108994461_108994610_108998512_108998756_109000490_109000674_109001287_109001489_109002277_109002344_109093794
transcript_173387.known	chr6	+	12903	11	FSM	ENSG00000183137.15	ENST00000517392.6	12903	11	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	18.450203250913	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTGTGTATATTTTGTT	109094399	True	NA	NA	False	CATAAA	-18	NA	109095506	109174418	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_109095576_109145218_109145382_109146757_109146938_109150117_109150240_109153832_109153950_109155229_109155308_109155790_109155878_109159024_109159103_109159268_109159463_109160571_109160717_109162748
transcript_1734.known	chr1	-	3719	5	FSM	ENSG00000227372.12	ENST00000648479.1	3719	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	81.3092091955149	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGGGAAAACCATCCGCC	-3740916	False	NA	-89	True	NA	NA	NA	3746714	3735685	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3737855_3740232_3740388_3742803_3742961_3743060_3743191_3745606
transcript_173400.known	chr6	+	908	7	FSM	ENSG00000183137.15	ENST00000519095.5	908	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	21.5309854241122	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGATATAAAATAAAAGACA	109094404	True	NA	NA	False	AAAAAG	-7	NA	109095511	109155974	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_109095576_109145218_109145382_109146757_109146938_109150117_109150240_109153832_109153950_109155229_109155308_109155790
transcript_173405.known	chr6	-	964	6	FSM	ENSG00000135535.17	ENST00000512821.5	964	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	301.376575068468	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGATATACATTATTTTAG	-109373260	True	NA	NA	False	NA	NA	NA	109382410	109367820	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_109368326_109370410_109370468_109376073_109376113_109377899_109377972_109379578_109379663_109382203
transcript_173406.known	chr6	-	778	6	FSM	ENSG00000135535.17	ENST00000506649.5	778	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	301.430854426019	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATCATTGTGTTCAACA	-109381890	False	NA	-46	True	AAGAAA	-8	NA	109381901	109368683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_109369018_109370410_109370468_109376073_109376113_109377899_109377972_109379578_109379663_109381709
transcript_173407.known	chr6	-	3020	6	FSM	ENSG00000135535.17	ENST00000310786.10	3020	6	0	0	0	0	multi-exon	FALSE	canonical	3	680	junction_3	47.964153281383	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGTTACTGCGTTTTG	-109373317	True	NA	0	True	AATAAA	-22	NA	109382467	109366513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_109369018_109370410_109370468_109376073_109376113_109377899_109377972_109379578_109379663_109382203
transcript_173409.known	chr6	-	2954	5	FSM	ENSG00000135535.17	ENST00000275080.11	2954	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	339.586881372058	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATAGTGTGTTACTGCGT	-109373294	True	NA	-4	True	AATAAA	-18	NA	109382444	109366517	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_109369018_109370410_109370468_109377899_109377972_109379578_109379663_109382203
transcript_173410.known	chr6	-	2936	5	FSM	ENSG00000135535.17	ENST00000324953.9	2936	5	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	291.649189952587	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATAGTGTGTTACTGCGT	-109373294	True	NA	-4	True	AATAAA	-18	NA	109382444	109366517	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_109369018_109376073_109376113_109377899_109377972_109379578_109379663_109382203
transcript_173412.known	chr6	-	590	4	FSM	ENSG00000135535.17	ENST00000512212.1	590	4	0	0	0	0	multi-exon	FALSE	canonical	3	680	junction_1	58.3913996711464	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATAGTCGGTGAATGTG	-109373261	True	NA	NA	False	NA	NA	NA	109382411	109375886	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_109376113_109377899_109377972_109379578_109379663_109382203
transcript_173413.known	chr6	-	2414	7	FSM	ENSG00000135535.17	ENST00000413644.6	2414	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	282.254465568454	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGTTACTGCGTTTTG	-109373307	True	NA	0	True	AATAAA	-22	NA	109382457	109366513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_109368326_109368921_109369018_109370410_109370468_109376073_109376113_109377899_109377972_109379578_109379663_109382203
transcript_173415.known	chr6	+	1684	10	FSM	ENSG00000135587.9	ENST00000258052.8	1684	10	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_6	9.79543859579297	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTCTGCCTTTTTCCTT	109440667	True	NA	5	True	AATAAA	-14	NA	109440723	109443919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_109441172_109441356_109441454_109441551_109441629_109441973_109442068_109442209_109442300_109442542_109442626_109442751_109442885_109442976_109443082_109443266_109443421_109443516
transcript_173416.nic	chr6	+	1827	9	NIC	ENSG00000135587.9	novel	1684	10	NA	NA	-17	0	intron_retention	FALSE	canonical	3	75	junction_5	9.01387818865997	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTCTGCCTTTTTCCTT	109440679	True	NA	5	True	AATAAA	-14	NA	109440706	109443919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_109441172_109441356_109441454_109441551_109441629_109441973_109442068_109442209_109442300_109442542_109442885_109442976_109443082_109443266_109443421_109443516
transcript_173417.nic	chr6	+	2035	9	NIC	ENSG00000135587.9	novel	1684	10	NA	NA	-6	0	intron_retention	FALSE	canonical	3	71	junction_5	10.1612007164508	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTCTGCCTTTTTCCTT	109440690	False	NA	5	True	AATAAA	-14	NA	109440717	109443919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_109441172_109441356_109441454_109441551_109442068_109442209_109442300_109442542_109442626_109442751_109442885_109442976_109443082_109443266_109443421_109443516
transcript_173418.known	chr6	-	3585	8	FSM	ENSG00000185250.16	ENST00000521072.7	3585	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	3.01018678652935	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTAGCCTCAGAGCTTG	-109440474	True	NA	NA	False	AATAAA	-21	NA	109440628	109390214	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_109392938_109400034_109400171_109419186_109419244_109426846_109426995_109427093_109427157_109431156_109431346_109436103_109436200_109440455
transcript_173434.nic	chr6	-	3491	25	NIC	ENSG00000135596.18	novel	3430	25	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_24	57.00341120397	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCGTTCACACCGCCTACA	-109453544	True	NA	-1	True	ATTAAA	-17	NA	109455725	109444061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_109444340_109444724_109444799_109444895_109444996_109445196_109445291_109445415_109445530_109445770_109445863_109446135_109446413_109446695_109446773_109447072_109447230_109447356_109447441_109447680_109447723_109447874_109447964_109448202_109448394_109448731_109448880_109449399_109449482_109449656_109449784_109449969_109450086_109450299_109450558_109451599_109451701_109452245_109452402_109452510_109452616_109453262_109453368_109453637_109453846_109453938_109454240_109455610
transcript_173435.known	chr6	-	3430	25	FSM	ENSG00000135596.18	ENST00000358807.8	3430	25	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_24	53.9912544358395	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCGTTCACACCGCCTACA	-109453591	True	NA	-1	True	ATTAAA	-17	NA	109455772	109444061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_109444340_109444724_109444799_109444895_109444996_109445196_109445291_109445415_109445530_109445770_109445863_109446135_109446413_109446695_109446773_109447072_109447230_109447356_109447441_109447680_109447723_109447874_109447964_109448202_109448394_109448731_109448880_109449399_109449482_109449656_109449784_109449969_109450086_109450299_109450558_109451599_109451701_109452245_109452402_109452510_109452616_109453262_109453368_109453637_109453846_109453938_109454240_109455718
transcript_17345.known	chr1	-	770	6	FSM	ENSG00000242193.11	ENST00000512906.2	770	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	6.5299310869258	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAAAATCTTGGAGTCAC	-178037541	True	NA	NA	False	NA	NA	NA	178037947	178007965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_178008150_178022439_178022669_178026154_178026256_178034704_178034802_178037693_178037802_178037896
transcript_173459.known	chr6	-	3142	24	FSM	ENSG00000135596.18	ENST00000358577.7	3142	24	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_17	65.6758955128727	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCGTTCACACCGCCTACA	-109453561	True	NA	-1	True	ATTAAA	-17	NA	109455742	109444061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_109444340_109444724_109444799_109444895_109444996_109445196_109445291_109445415_109445530_109445770_109445863_109446135_109446413_109446695_109446773_109447072_109447230_109447356_109447441_109447680_109447723_109447874_109447964_109448202_109448394_109448731_109448880_109449399_109449482_109449656_109449784_109449969_109450086_109451599_109451701_109452245_109452402_109452510_109452616_109453262_109453368_109453637_109453846_109453938_109454240_109455718
transcript_17346.known	chr1	-	2329	2	FSM	ENSG00000224687.2	ENST00000421505.1	2329	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATAGTAGAATGATTTAT	-178093931	True	NA	-10	True	AATAAA	-19	NA	178093984	178091507	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_178093413_178093560
transcript_173463.nnic	chr6	-	3552	24	NIC	ENSG00000135596.18	novel	3430	25	NA	NA	-206	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_9	66.3817794482953	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCGTTCACACCGCCTACA	-109455945	False	NA	-1	True	ATTAAA	-17	NA	109455978	109444061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_109444340_109444724_109444799_109444895_109444996_109445196_109445291_109445415_109445530_109445770_109445863_109446135_109446413_109446695_109446773_109447072_109447230_109447680_109447723_109447874_109447964_109448202_109448394_109448731_109448880_109449399_109449482_109449656_109449784_109449969_109450086_109450299_109450558_109451599_109451701_109452245_109452402_109452510_109452616_109453262_109453368_109453637_109453846_109453938_109454240_109455718
transcript_17347.known	chr1	+	9843	18	FSM	ENSG00000075391.17	ENST00000367649.8	9843	18	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_12	9.49922597465957	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAGACTAAAGTTGCTAC	178093653	True	NA	NA	False	AATAAA	-16	NA	178094103	178478850	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_178094695_178283563_178283692_178299991_178300119_178390099_178390207_178420510_178420621_178439421_178439576_178441548_178441648_178442674_178443230_178445517_178445663_178451570_178451716_178452415_178452653_178454446_178454649_178456720_178456900_178457682_178458545_178464277_178464413_178465919_178466123_178467333_178467422_178473074
transcript_17348.nic	chr1	+	1899	8	ISM	ENSG00000075391.17	ENST00000367649.8	9843	18	-344	35937	-344	-14994	5prime_fragment	FALSE	canonical	3	19	junction_1	5.96246764420263	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGACAAGAATAATTATGTAG	178093064	True	NA	NA	False	AAAAAG	-9	NA	178093759	178442913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_178094695_178283563_178283692_178299991_178300119_178390099_178390207_178420510_178420621_178439421_178439576_178441548_178441648_178442674
transcript_173487.known	chr6	-	5501	7	FSM	ENSG00000112365.5	ENST00000230122.4	5501	7	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_5	15.4020200695306	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCTCATTATAAATGCTT	-109479910	True	NA	NA	False	ATTAAA	-22	NA	109483219	109462593	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_109466575_109467652_109467735_109475398_109475483_109476174_109476259_109476762_109476931_109481074_109482055_109483097
transcript_17350.known	chr1	+	14453	16	FSM	ENSG00000075391.17	ENST00000462775.5	14453	16	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	12.5273035140581	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGTGTGTGTGGAAGGTG	178341334	True	NA	NA	False	AATAAA	-17	NA	178341470	178484147	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_178341609_178390099_178390207_178420510_178420621_178439421_178439576_178441548_178441648_178442674_178443230_178445517_178445663_178451570_178451716_178452415_178452653_178454446_178454649_178456699_178456900_178457682_178458545_178464277_178464413_178465919_178466123_178467333_178467422_178473074
transcript_173507.known	chr6	-	2566	12	FSM	ENSG00000155085.16	ENST00000285397.9	2566	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	11.5558292684967	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTACTATAAACATTCTTG	-109690978	True	NA	NA	False	AATAAA	-32	NA	109691217	109631692	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_109633104_109633183_109633324_109641517_109641617_109644613_109644689_109656755_109656885_109659227_109659414_109662550_109662664_109671918_109672016_109672114_109672168_109674197_109674262_109675628_109675757_109691146
transcript_173513.known	chr6	+	3042	23	FSM	ENSG00000112367.12	ENST00000674783.1	3042	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	54.454090148347	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAATAAAGATGACTAGATA	109688455	True	NA	-10	True	NA	NA	NA	109691285	109825405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743646_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109796764_109796852_109825087
transcript_173514.known	chr6	+	3025	23	FSM	ENSG00000112367.12	ENST00000230124.8	3025	23	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_7	25.3083463840334	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGTTGTTGCCTTTGC	109688465	True	NA	11	True	AATAAA	-14	NA	109691295	109825426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109796764_109796852_109825087
transcript_173515.known	chr6	+	2966	22	FSM	ENSG00000112367.12	ENST00000675726.1	2966	22	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_21	54.4501686101889	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAGATGACTAGATAAT	109688418	True	NA	-8	True	NA	NA	NA	109691248	109825407	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109825087
transcript_173516.known	chr6	+	2915	22	FSM	ENSG00000112367.12	ENST00000676442.1	2915	22	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	54.3957948221282	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACTAGATAATTTGCTGT	109688434	True	NA	-1	True	AATAAA	-2	NA	109691264	109825414	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109796764_109796852_109825087
transcript_173517.known	chr6	+	2865	22	FSM	ENSG00000112367.12	ENST00000674657.1	2865	22	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	53.5915517760841	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATAAAGATGACTAGATAA	109688448	True	NA	-9	True	NA	NA	NA	109691278	109825406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109796764_109796852_109825087
transcript_17352.known	chr1	+	7492	20	FSM	ENSG00000116191.19	ENST00000367635.8	7492	20	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_15	11.6702144717728	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATTGGGTGAGGATGTTT	178721528	True	NA	-74	True	AATAAA	-14	NA	178725243	178921840	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_178725420_178776681_178776822_178784417_178784523_178785556_178785608_178808044_178808129_178811314_178811405_178821611_178821705_178833423_178833551_178877497_178877636_178878901_178878993_178883465_178883534_178885075_178885212_178885968_178886121_178889641_178889697_178892229_178892308_178893918_178894025_178897663_178897757_178902105_178902212_178906775_178906868_178916329
transcript_173520.known	chr6	+	2781	21	FSM	ENSG00000112367.12	ENST00000674569.1	2781	21	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_6	50.1253428915953	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGACTAGATAATTTGCT	109688465	True	NA	-3	True	NA	NA	NA	109691295	109825412	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109796764_109796852_109825087
transcript_173522.known	chr6	+	2786	21	FSM	ENSG00000112367.12	ENST00000674641.1	2786	21	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	54.2091090131539	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATGACTAGATAATTTG	109688465	True	NA	-5	True	NA	NA	NA	109691295	109825410	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_109691502_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109796764_109796852_109825087
transcript_173523.known	chr6	+	2725	20	FSM	ENSG00000112367.12	ENST00000675714.1	2725	20	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_7	25.1486439719681	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTAATGGTGAATTTCTG	109688457	True	NA	NA	False	AATAAA	-20	NA	109691287	109791772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375
transcript_173524.known	chr6	+	2501	20	FSM	ENSG00000112367.12	ENST00000675831.1	2501	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	57.6660555371948	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTGTCTCATCTTCAAA	109688482	True	NA	-44	True	NA	NA	NA	109691312	109825312	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109796764_109796852_109825087
transcript_173525.known	chr6	+	2443	19	FSM	ENSG00000112367.12	ENST00000675426.1	2443	19	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	84.6696558235827	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTCTGAAGCCTTTCTCCT	109688455	True	NA	-1	True	ATTAAA	-9	NA	109691285	109825355	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109732636_109732688_109735149_109735299_109743109_109743273_109743674_109743773_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109796764_109796852_109825087
transcript_173526.known	chr6	+	2187	15	FSM	ENSG00000112367.12	ENST00000675681.1	2187	15	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_7	25.4157270931498	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTGAGTCATTTTTTTA	109688481	True	NA	NA	False	GATAAA	-11	NA	109691311	109767208	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728
transcript_173528.known	chr6	+	1387	9	FSM	ENSG00000112367.12	ENST00000676435.1	1387	9	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_7	26.9351072023113	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATGTAAGAATCATTCAA	109688465	True	NA	34	True	AATAAA	-20	NA	109691295	109743480	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109
transcript_173532.known	chr6	+	1158	7	FSM	ENSG00000112367.12	ENST00000368941.2	1158	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_6	88.5525581536499	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATGTAAGAATCATTCAA	109688464	True	NA	34	True	AATAAA	-20	NA	109691294	109743480	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109743109
transcript_173534.known	chr6	+	2963	23	FSM	ENSG00000112367.12	ENST00000675772.1	2963	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	54.3161087470512	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCCTCCTGAACCCCAT	109688465	True	NA	NA	False	NA	NA	NA	109691295	109878098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109796764_109796852_109877821
transcript_173537.known	chr6	-	2886	11	FSM	ENSG00000112290.13	ENST00000392589.6	2886	11	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_9	126.821764693605	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTGTTGCTCTTTGAA	-110175831	True	NA	-1	True	AATAAA	-19	NA	110179670	110099818	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_110100680_110101587_110102217_110103377_110103558_110105406_110105580_110107076_110107195_110108527_110108682_110113325_110113461_110127468_110127630_110160634_110160733_110178597_110178743_110179438
transcript_173538.known	chr6	-	3075	10	FSM	ENSG00000112290.13	ENST00000359451.6	3075	10	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_9	102.92392012226	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTGTTGCTCTTTGAA	NA	False	NA	-1	True	AATAAA	-19	NA	110180004	110099818	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_110100680_110101587_110102217_110103377_110103558_110105406_110105580_110107076_110107195_110108527_110108682_110113325_110113461_110127468_110127630_110160634_110160733_110179438
transcript_173539.known	chr6	-	3122	10	FSM	ENSG00000112290.13	ENST00000392588.5	3122	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_9	122.57524773797	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTGTTGCTCTTTGAA	NA	False	NA	-1	True	AATAAA	-19	NA	110180004	110099818	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_110100680_110101587_110102217_110103377_110103558_110105406_110105580_110107076_110107195_110108527_110108682_110113325_110113461_110127468_110127630_110178597_110178743_110179438
transcript_173541.known	chr6	-	2675	9	FSM	ENSG00000112290.13	ENST00000392587.6	2675	9	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_8	37.8877866204929	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTGTTGCTCTTTGAA	-110175863	True	NA	-1	True	AATAAA	-19	NA	110179702	110099818	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_110100680_110101587_110102217_110103377_110103558_110105406_110105580_110107076_110107195_110108527_110108682_110113325_110113461_110127468_110127630_110179438
transcript_173551.known	chr6	+	3859	15	FSM	ENSG00000168438.15	ENST00000307731.2	3859	15	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_6	13.7625638332872	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCATCTTGTTCATCTTT	110177250	True	NA	29	True	AATAAA	-29	NA	110180426	110232232	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_110180634_110193181_110193269_110201557_110201688_110207505_110207590_110209083_110209224_110210706_110210804_110212132_110212273_110213085_110213161_110215285_110215332_110217701_110217804_110219363_110219480_110219735_110219870_110226166_110226244_110228831_110228977_110229953
transcript_173552.known	chr6	+	1977	15	FSM	ENSG00000168438.15	ENST00000368930.5	1977	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	40.5226693925003	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCATATTTTAAGAATTGT	110177244	True	NA	NA	False	AAAACA	-29	NA	110180420	110254275	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_110180634_110193181_110193269_110201557_110201688_110207505_110207590_110209083_110209224_110210706_110210804_110212132_110212273_110213085_110213161_110215285_110215332_110217701_110217804_110219363_110219480_110219735_110219870_110226166_110226244_110228831_110228977_110253884
transcript_173553.known	chr6	+	3933	16	FSM	ENSG00000168438.15	ENST00000368932.5	3933	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	39.6751251485809	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATCAAAATGTTCATCTTG	110180109	True	NA	20	True	AATAAA	-20	NA	110180140	110232223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_110180181_110180383_110180634_110193181_110193269_110201557_110201688_110207505_110207590_110209083_110209224_110210706_110210804_110212132_110212273_110213085_110213161_110215285_110215332_110217701_110217804_110219363_110219480_110219735_110219870_110226166_110226244_110228831_110228977_110229953
transcript_173554.known	chr6	-	1959	8	FSM	ENSG00000004809.14	ENST00000368919.8	1959	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	0.534522483824849	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTTCTTATTGCTGCAA	NA	False	NA	NA	False	AATAAA	-31	NA	110476613	110424686	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_110425086_110431170_110431271_110435851_110435962_110438719_110438848_110442243_110442776_110446872_110446991_110456537_110457018_110476521
transcript_173556.known	chr6	-	6399	13	FSM	ENSG00000155111.15	ENST00000368911.8	6399	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	2.56444709223819	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTGTGGATTTTTTAA	-110814739	True	NA	-1	True	AATAAA	-16	NA	110815469	110609977	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_110614667_110621103_110621371_110622087_110622167_110622814_110622913_110623289_110623363_110626775_110626846_110627001_110627146_110632029_110632162_110638648_110638707_110667433_110667575_110670430_110670542_110746125_110746202_110815008
transcript_173560.known	chr6	+	6589	9	FSM	ENSG00000123505.19	ENST00000672937.2	6589	9	0	0	0	0	multi-exon	FALSE	canonical	3	562	junction_5	68.4525383020966	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTTATGGTGGTATTG	110856426	True	NA	1	True	AATAAA	-14	NA	110874784	110898879	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_110875216_110887504_110887592_110888856_110888984_110890253_110890357_110892160_110892204_110892298_110892444_110892734_110892828_110892909_110893066_110893475
transcript_173568.known	chr6	+	1605	8	FSM	ENSG00000123505.19	ENST00000368877.9	1605	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	218.033886151222	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTCGTCCTCATTAGGT	110856426	True	NA	NA	False	NA	NA	NA	110874784	110893982	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_110875216_110888856_110888984_110890253_110890357_110892160_110892204_110892298_110892444_110892734_110892828_110892909_110893066_110893475
transcript_173570.known	chr6	+	3121	6	FSM	ENSG00000123505.19	ENST00000451850.6	3121	6	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_1	258.13562326808	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTGTTGCCCTGTTTT	110874759	False	NA	30	True	AATAAA	-29	NA	110874769	110895713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_110875216_110892160_110892204_110892298_110892444_110892734_110892828_110892909_110893066_110893475
transcript_173572.known	chr6	+	3059	5	FSM	ENSG00000123505.19	ENST00000675380.1	3059	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	289.483483984838	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAACTTTTCTGTTGCCCT	110856425	True	NA	25	True	AATAAA	-24	NA	110874783	110895708	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_110875216_110892298_110892444_110892734_110892828_110892909_110893066_110893475
transcript_173574.known	chr6	+	788	6	FSM	ENSG00000155115.7	ENST00000329970.8	788	6	0	0	0	0	multi-exon	FALSE	canonical	3	1705	junction_1	163.149501991272	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTCAGTCTTTTAATATT	110935481	True	NA	14	True	CATAAA	-16	NA	110958705	110967872	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_110958827_110959171_110959253_110960413_110960478_110960571_110960617_110962391_110962506_110967509
transcript_173576.known	chr6	+	800	6	FSM	ENSG00000155115.7	ENST00000480191.1	800	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	826.656978437852	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGCATTTTATTGGC	110958895	False	NA	32	True	CATAAA	-34	NA	110958927	110967890	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_110959043_110959171_110959253_110960413_110960478_110960571_110960617_110962391_110962506_110967509
transcript_173584.known	chr6	+	3671	10	FSM	ENSG00000197498.13	ENST00000441448.7	3671	10	0	0	0	0	multi-exon	FALSE	canonical	3	884	junction_7	58.2713956890991	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCATTTATCTGATTAG	110970730	True	NA	17	True	AATAAA	-17	NA	110982037	111028263	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_110982130_110985005_110985139_110989027_110989066_110991746_110991787_110997182_110997265_110999710_110999788_111008037_111008138_111015753_111015857_111024182_111024328_111025402
transcript_173587.nic	chr6	+	831	9	ISM	ENSG00000197498.13	ENST00000441448.7	3671	10	-21	3936	2	0	5prime_fragment	FALSE	canonical	3	884	junction_7	61.2697672184251	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATAACTTAGAGCTTGG	110970709	True	NA	34	True	TATAAA	-31	NA	110982016	111024327	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_110982130_110985005_110985139_110989027_110989066_110991746_110991787_110997182_110997265_110999710_110999788_111008037_111008138_111015753_111015857_111024182
transcript_173589.known	chr6	+	3621	9	FSM	ENSG00000197498.13	ENST00000607388.1	3621	9	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	326.560269131136	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCATTTATCTGATTAG	110970742	True	NA	17	True	AATAAA	-17	NA	110982049	111028263	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_110982130_110985005_110985139_110991746_110991787_110997182_110997265_110999710_110999788_111008037_111008138_111015753_111015857_111024182_111024328_111025402
transcript_173591.nic	chr6	+	284	3	ISM	ENSG00000197498.13	ENST00000441448.7	3671	10	-21	39198	2	-35262	5prime_fragment	FALSE	canonical	3	988	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCATGATTTCTTTTA	110970709	True	NA	NA	False	TATAAA	-3	NA	110982016	110989065	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_110982130_110985005_110985139_110989027
transcript_173593.known	chr6	+	10757	6	FSM	ENSG00000112394.18	ENST00000368851.10	10757	6	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_4	16.6685332288117	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAAGGCTTTGTGGTTATG	111085924	True	NA	8	True	AATAAA	-19	NA	111087502	111231194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_111088096_111172694_111172840_111177211_111177666_111206591_111206736_111218813_111219043_111222002
transcript_173596.nic	chr6	+	1579	4	NIC	ENSG00000112394.18	novel	912	3	NA	NA	-74	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_3	37.7211994624891	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTTTGTGAACTTGGAT	NA	False	NA	21	True	GATAAA	-23	NA	111087428	111178714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_111088096_111172694_111172840_111177211_111177666_111178401
transcript_173597.nic	chr6	+	1313	3	ISM	ENSG00000112394.18	ENST00000368851.10	10757	6	-74	53482	-74	0	5prime_fragment	FALSE	canonical	3	104	junction_1	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTTCTTTGAAGAGAAA	NA	False	NA	-11	True	AATAAA	-3	NA	111087428	111177712	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_111088096_111172694_111172840_111177211
transcript_173599.known	chr6	+	1231	4	NNC	ENSG00000112394.18	novel	10757	6	NA	NA	0	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	49.5042085752986	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGAAAAACTTCTTTGAA	111085924	True	NA	-17	True	NA	NA	NA	111087502	111177706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_111088096_111172694_111172840_111177211_111177564_111177565
transcript_173600.known	chr6	+	14805	4	FSM	ENSG00000173214.7	ENST00000671876.2	14805	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	5.55777733351102	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGTTGGTTTAAGATTC	111257382	True	NA	5	True	AATAAA	-16	NA	111259338	111280005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_111259728_111262256_111262426_111263829_111263947_111265875
transcript_173611.known	chr6	+	609	4	FSM	ENSG00000231889.8	ENST00000525151.5	609	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	34.4222150491349	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCGTGTTACACTTGTC	111482462	True	NA	NA	False	ATTAAA	-16	NA	111483515	111503608	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_111483666_111484117_111484146_111484743_111484862_111503295
transcript_173612.known	chr6	+	1106	3	FSM	ENSG00000231889.8	ENST00000449449.7	2171	3	45	1020	4	135	multi-exon	FALSE	canonical	3	18	junction_1	11.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTCTCCAAGAAAAACTC	111482487	True	NA	NA	False	NA	NA	NA	111483540	111577160	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_111483666_111574620_111574803_111576361
transcript_173616.known	chr6	-	2785	10	FSM	ENSG00000056972.20	ENST00000340026.10	2785	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	35.5996254661946	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATGTTTTACTTATCTC	-111606264	False	NA	-7	True	AATAAA	-19	NA	111606278	111558939	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_111559552_111562964_111563040_111566443_111566561_111567623_111567693_111572894_111572984_111575642_111575822_111580196_111580390_111591257_111592095_111601195_111601307_111605775
transcript_173618.known	chr6	-	2264	9	FSM	ENSG00000056972.20	ENST00000359831.8	2264	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	28.8896066951421	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATGTTTTACTTATCTC	-111604393	True	NA	-7	True	AATAAA	-19	NA	111605871	111558939	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_111559552_111562964_111563040_111566443_111566558_111567623_111567693_111572894_111572984_111575642_111575822_111580196_111580390_111591257_111592095_111605775
transcript_17362.known	chr1	+	7512	19	FSM	ENSG00000116191.19	ENST00000367634.7	7441	19	-72	1	-18	1	multi-exon	FALSE	canonical	2	8	junction_14	22.6023734141045	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGGGTGAGGATGTTTT	178721431	True	NA	-73	True	AATAAA	-15	NA	178725146	178921841	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_178725420_178776681_178776822_178784417_178784523_178785556_178785608_178808044_178808129_178811314_178811405_178821611_178821705_178833423_178833551_178877497_178877636_178878901_178878993_178883465_178883534_178885075_178885212_178885968_178886121_178889641_178889697_178893918_178894025_178897663_178897757_178902105_178902212_178906775_178906868_178916329
transcript_173632.known	chr6	-	3234	14	FSM	ENSG00000010810.17	ENST00000368682.7	3234	14	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_5	54.8177183812014	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTTTATTTGT	-111871735	False	NA	2	True	ATTAAA	-23	NA	111873067	111660331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_111661948_111674498_111674631_111694374_111694529_111694627_111694705_111696276_111696457_111699514_111699671_111702884_111703035_111703998_111704103_111707921_111708021_111714346_111714444_111719804_111720063_111780565_111780636_111846588_111846630_111872967
transcript_173633.known	chr6	-	3628	14	FSM	ENSG00000010810.17	ENST00000354650.7	3628	14	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_5	44.9882298874091	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTTTATTTGT	-111872120	False	NA	2	True	ATTAAA	-23	NA	111873452	111660331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_111661948_111674498_111674631_111694374_111694529_111694627_111694705_111696276_111696457_111700103_111700269_111702884_111703035_111703998_111704103_111707921_111708021_111714346_111714444_111719804_111720063_111780565_111780636_111846588_111846630_111872967
transcript_173639.nic	chr6	-	2656	13	NIC	ENSG00000010810.17	novel	3234	14	NA	NA	-32	0	intron_retention	FALSE	canonical	3	71	junction_12	70.4211537031941	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATCAGGACAGGTGTTTG	NA	False	NA	-9	True	AATAAA	-26	NA	111873484	111661285	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_111661948_111674498_111674631_111694374_111694529_111694627_111694705_111696276_111696457_111699514_111699671_111702884_111703035_111703998_111704103_111707921_111708021_111714346_111714444_111719804_111720063_111780565_111780636_111872967
transcript_17364.known	chr1	+	1970	10	FSM	ENSG00000116191.19	ENST00000495034.5	1970	10	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_5	10.6144555520604	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	178721449	True	NA	NA	False	AAAAAG	-16	NA	178725164	178879788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_178725420_178776681_178776822_178784417_178784523_178785556_178785608_178808044_178808129_178811314_178811405_178821611_178821705_178833423_178833551_178877497_178877636_178878901
transcript_173640.nic	chr6	-	2665	13	NIC	ENSG00000010810.17	novel	3628	14	NA	NA	-32	0	intron_retention	FALSE	canonical	3	71	junction_12	63.1552320345142	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATCAGGACAGGTGTTTG	NA	False	NA	-9	True	AATAAA	-26	NA	111873484	111661285	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_111661948_111674498_111674631_111694374_111694529_111694627_111694705_111696276_111696457_111700103_111700269_111702884_111703035_111703998_111704103_111707921_111708021_111714346_111714444_111719804_111720063_111780565_111780636_111872967
transcript_173642.nic	chr6	-	2589	13	NIC	ENSG00000010810.17	novel	3234	14	NA	NA	-32	-67	intron_retention	FALSE	canonical	3	71	junction_12	70.4211537031941	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTATTTTCCAAAAGTGG	NA	False	NA	-29	True	ACTAAA	-10	NA	111873484	111661352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_111661948_111674498_111674631_111694374_111694529_111694627_111694705_111696276_111696457_111699514_111699671_111702884_111703035_111703998_111704103_111707921_111708021_111714346_111714444_111719804_111720063_111780565_111780636_111872967
transcript_173643.nic	chr6	-	2598	13	NIC	ENSG00000010810.17	novel	3628	14	NA	NA	-32	-67	intron_retention	FALSE	canonical	3	71	junction_12	63.1552320345142	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTATTTTCCAAAAGTGG	NA	False	NA	-29	True	ACTAAA	-10	NA	111873484	111661352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_111661948_111674498_111674631_111694374_111694529_111694627_111694705_111696276_111696457_111700103_111700269_111702884_111703035_111703998_111704103_111707921_111708021_111714346_111714444_111719804_111720063_111780565_111780636_111872967
transcript_173651.known	chr6	-	2225	12	FSM	ENSG00000074935.14	ENST00000368662.10	2225	12	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_5	19.807336482031	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCAGTTCTAGCCTTAAC	-112085613	True	NA	2	True	AATAAA	-28	NA	112087482	112070662	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_112071571_112071901_112072077_112072757_112072899_112074709_112074851_112075936_112076113_112076321_112076510_112079632_112079755_112081091_112081208_112084188_112084247_112086555_112086609_112087232_112087307_112087409
transcript_173653.nic	chr6	-	2100	11	NIC	ENSG00000074935.14	novel	2225	12	NA	NA	0	-114	combination_of_known_junctions	FALSE	canonical	3	32	junction_8	31.758620876858	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGCTACTTGTTATTGTT	-112085660	True	NA	-5	True	AATAAA	-17	NA	112087529	112070776	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_112071571_112071901_112072077_112072757_112072899_112074709_112074851_112075936_112076113_112076321_112076510_112079632_112079755_112081091_112081208_112086555_112086609_112087232_112087307_112087409
transcript_173661.nic	chr6	-	776	7	ISM	ENSG00000074935.14	ENST00000605457.5	1645	12	-20	4948	0	158	5prime_fragment	FALSE	canonical	3	106	junction_4	12.4286854583348	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTGTATTATGTATGTG	-112085660	True	NA	-8	True	AATAAA	-15	NA	112087529	112076276	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_112076510_112079632_112079755_112081091_112081208_112084188_112084247_112086555_112086609_112087232_112087307_112087409
transcript_173662.known	chr6	+	2551	4	FSM	ENSG00000203778.8	ENST00000368656.7	2551	4	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_1	15.121728296285	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACCAAAAGTGTAACATTC	112085538	True	NA	NA	False	AATAAA	-24	NA	112087590	112102790	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_112087721_112097040_112097202_112099269_112099409_112100669
transcript_173663.known	chr6	+	598	4	FSM	ENSG00000203778.8	ENST00000604268.1	598	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	125.661803619433	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGAGCTCTTTACTTTT	112085585	True	NA	27	True	AATAAA	-28	NA	112087637	112100895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_112087710_112097040_112097202_112099269_112099409_112100669
transcript_173664.known	chr6	-	619	2	FSM	ENSG00000112769.20	ENST00000368638.5	619	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGATGTTGAGAGTTGAA	-112254470	True	NA	NA	False	AATAAA	-23	NA	112254567	112253781	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_112254292_112254458
transcript_173665.known	chr6	-	645	2	FSM	ENSG00000112769.20	ENST00000453937.2	645	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGATGTTGAGAGTTG	-112254481	True	NA	NA	False	AATAAA	-21	NA	112254578	112253783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_112254292_112254441
transcript_173666.known	chr6	+	4296	2	FSM	ENSG00000277443.3	ENST00000612661.2	4296	2	0	0	0	0	multi-exon	FALSE	canonical	3	1047	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGCTAAAATAGGATTTT	113837229	True	NA	19	True	AATAAA	-24	NA	113857344	113863475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_113857848_113859682
transcript_173672.known	chr6	+	2016	10	FSM	ENSG00000228624.8	ENST00000519104.5	2016	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.45452467048606	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTTTGATATTCATATT	NA	False	NA	NA	False	AATAAA	-19	NA	113969700	114340738	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_113970279_113991892_113992019_113993342_113993488_113995599_113996061_114088936_114089020_114116117_114116181_114178652_114178721_114179024_114179158_114235629_114235772_114340521
transcript_173676.known	chr6	+	563	4	FSM	ENSG00000228624.8	ENST00000449620.6	563	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.16024689946929	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATGGTTTTATGAGCAT	113969929	False	NA	NA	False	AGTAAA	-4	NA	113970234	113995802	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_113970324_113991892_113992019_113993342_113993488_113995599
transcript_173689.known	chr6	-	9737	14	FSM	ENSG00000196591.12	ENST00000519065.6	9737	14	0	0	0	0	multi-exon	FALSE	canonical	3	2813	junction_10	184.432248909647	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTTCTTGCTGATCAC	-113920973	True	NA	NA	False	AATAAA	-14	NA	113971148	113933027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_113941089_113941707_113941766_113943350_113943507_113944279_113944411_113945361_113945471_113946007_113946149_113948978_113949088_113949167_113949261_113953276_113953419_113956012_113956152_113956618_113956694_113958648_113958767_113959905_113960019_113970856
transcript_173694.nic	chr6	-	1821	12	ISM	ENSG00000196591.12	ENST00000519065.6	9737	14	-221	10341	-212	2011	5prime_fragment	FALSE	canonical	3	2813	junction_8	175.143624651879	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGAGGACAAAAAAACAGGT	-113971351	False	NA	16	True	AAGAAA	-41	NA	113971369	113943368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_113943507_113944279_113944411_113945361_113945471_113946007_113946149_113948978_113949088_113949167_113949261_113953276_113953419_113956012_113956152_113956618_113956694_113958648_113958767_113959905_113960019_113970856
transcript_173696.known	chr6	-	733	3	FSM	ENSG00000196591.12	ENST00000521233.1	733	3	0	0	0	0	multi-exon	FALSE	canonical	3	3090	junction_2	73	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTAGTTTGCTCCCCTGA	-113920961	True	NA	NA	False	NA	NA	NA	113971136	113958426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_113958767_113959905_113960019_113970856
transcript_173697.known	chr6	-	690	2	FSM	ENSG00000196591.12	ENST00000520170.1	690	2	0	0	0	0	multi-exon	FALSE	canonical	3	3090	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTTTTACAATAA	-113920962	True	NA	NA	False	NA	NA	NA	113971137	113959609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_113960019_113970856
transcript_173698.known	chr6	-	2084	15	FSM	ENSG00000196591.12	ENST00000368632.6	2084	15	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_14	1102.96378092883	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCTTTTGTCTGTTTAT	-113920982	True	NA	30	True	ATTAAA	-14	NA	113971157	113940717	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_113941089_113941707_113941766_113943350_113943507_113944279_113944411_113945361_113945471_113946007_113946149_113948978_113949088_113949167_113949261_113953276_113953419_113956012_113956152_113956618_113956694_113958648_113958767_113959905_113960019_113962366_113962395_113970856
transcript_173703.known	chr6	-	3869	5	FSM	ENSG00000249853.9	ENST00000312719.10	3869	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	13.4233937586588	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCGGTATATATTGCTT	-114341681	True	NA	-9	True	AATAAA	-17	NA	114343023	114055595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_114058191_114062738_114062878_114168350_114168463_114228584_114228779_114342194
transcript_173713.nic	chr6	-	2230	3	ISM	ENSG00000249853.9	ENST00000312719.10	3869	5	-831	112491	-831	-610	5prime_fragment	FALSE	canonical	3	52	junction_1	3	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTTTTGCGTGTGTTGT	-114343834	False	NA	-5	True	AATGAA	-33	NA	114343854	114168086	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_114168463_114228584_114228779_114342194
transcript_173717.known	chr6	+	6919	12	FSM	ENSG00000178425.14	ENST00000319550.9	6919	12	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_6	38.043037829184	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATTTGTCTCTAGACAT	116094342	True	NA	4	True	ATTAAA	-15	NA	116100852	116249497	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_116101024_116106243_116106336_116108363_116108436_116110849_116110957_116115690_116115771_116117860_116117946_116221053_116221229_116223033_116223132_116236965_116237085_116238186_116238349_116238954_116239124_116243908
transcript_173725.nic	chr6	+	693	6	ISM	ENSG00000178425.14	ENST00000419791.3	667	7	-84	27550	-84	-147	5prime_fragment	FALSE	canonical	3	352	junction_2	27.0658456361518	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTATTGTGAAGAGGGG	116094256	True	NA	NA	False	TATAAA	-17	NA	116100766	116117945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_116101024_116106243_116106336_116108363_116108436_116110849_116110957_116115690_116115771_116117860
transcript_173727.nnic	chr6	-	2538	2	Genic_Genomic	ENSG00000187189.11	novel	4112	1	NA	NA	-59	0	multi-exon	FALSE	canonical	3	48	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTGTCTAGGTTAA	NA	False	NA	-3	True	AATAAA	-15	NA	116254134	116249963	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Genic_Genomic_chr6_-_116250419_116252051
transcript_173728.nnic	chr6	-	2331	2	Genic_Genomic	ENSG00000187189.11	novel	4112	1	NA	NA	-59	-207	multi-exon	FALSE	canonical	3	48	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGACTCTGTTGTCTTACT	NA	False	NA	NA	False	AAAAAG	-6	NA	116254134	116250170	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Genic_Genomic_chr6_-_116250419_116252051
transcript_173729.known	chr6	-	4112	1	FSM	ENSG00000187189.11	ENST00000420283.3	4112	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTGTCTAGGTTAA	-116251388	True	NA	-3	True	AATAAA	-15	NA	116254075	116249963	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_116250000_116254100
transcript_17373.known	chr1	+	5991	8	FSM	ENSG00000116199.12	ENST00000263733.5	5991	8	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_4	14.6133849743365	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGATCTTTTCCTCTTC	179024986	True	NA	13	True	AATAAA	-19	NA	179025893	179076567	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_179026099_179043714_179044225_179050278_179050366_179054528_179054639_179063926_179064099_179064304_179064497_179066799_179066860_179071912
transcript_173730.known	chr6	+	1127	3	FSM	ENSG00000188820.13	ENST00000368605.3	1127	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGAGTGCTTTTTTTC	NA	False	NA	7	True	AATAAA	-9	NA	116461374	116463771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_116461430_116461871_116462455_116463282
transcript_173734.known	chr6	+	1427	8	FSM	ENSG00000111832.13	ENST00000487832.6	1427	8	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	274.896789537381	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTAGCCTTCCTTTTAG	116561253	True	NA	NA	False	GATAAA	-35	NA	116571488	116593588	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_116571656_116574057_116574172_116580294_116580361_116584726_116584858_116588841_116588986_116590271_116590405_116590887_116590951_116592979
transcript_173735.known	chr6	+	5385	7	FSM	ENSG00000111832.13	ENST00000466444.7	5385	7	0	0	0	0	multi-exon	FALSE	canonical	3	602	junction_4	54.3251527583883	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTTGCAAAGCTACCTCAT	116561268	True	NA	NA	False	AATAAA	-19	NA	116571503	116597675	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_116571656_116580294_116580361_116584726_116584858_116588841_116588986_116590271_116590405_116590887_116590951_116592979
transcript_173737.known	chr6	+	857	7	FSM	ENSG00000111832.13	ENST00000368590.9	857	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	313.007676512183	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAGAATTTCTTAAATTG	116561173	True	NA	NA	False	NA	NA	NA	116571408	116590298	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_116571656_116572857_116572986_116574057_116574172_116580294_116580361_116584726_116584858_116588841_116588986_116590271
transcript_173740.nic	chr6	+	720	5	ISM	ENSG00000111832.13	ENST00000466444.7	5385	7	-137	7314	-42	0	5prime_fragment	FALSE	canonical	3	602	junction_4	51.4265252569139	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGGATGAAAGAAGAAGAACA	116561131	True	NA	NA	False	ATTAAA	-7	NA	116571366	116590361	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_116571656_116580294_116580361_116584726_116584858_116588841_116588986_116590271
transcript_173743.nic	chr6	+	694	5	ISM	ENSG00000111832.13	ENST00000487832.6	1427	8	-93	4624	-13	-1334	5prime_fragment	FALSE	canonical	3	68	junction_1	309.003640755251	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGCAGAAGAAGCTGAAAA	116561160	True	NA	NA	False	GATAAA	-38	NA	116571395	116588964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_116571656_116574057_116574172_116580294_116580361_116584726_116584858_116588841
transcript_173744.nic	chr6	+	609	4	ISM	ENSG00000111832.13	ENST00000466444.7	5385	7	-137	8711	-42	-1334	5prime_fragment	FALSE	canonical	3	634	junction_1	40.4227658628155	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGCAGAAGAAGCTGAAAA	116561131	True	NA	NA	False	GATAAA	-38	NA	116571366	116588964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_116571656_116580294_116580361_116584726_116584858_116588841
transcript_173746.known	chr6	+	2840	6	FSM	ENSG00000111834.13	ENST00000229554.10	2840	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.979795897113271	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTGTGGACTGTGATAT	116616416	True	NA	NA	False	NA	NA	NA	116616478	116632985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_116617310_116622767_116623003_116627628_116628370_116629566_116629703_116630434_116630553_116632206
transcript_173748.nic	chr6	-	1905	10	NIC	ENSG00000153975.10	novel	2167	10	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_9	40.879225911349	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTGTTTTTCTTATCTA	-116666734	True	NA	-1	True	AATAAA	-22	NA	116668799	116635617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_116635880_116645713_116645935_116647458_116647611_116651571_116651738_116652003_116652193_116656683_116656853_116658802_116658925_116660735_116660847_116666633_116666913_116668565
transcript_173750.known	chr6	-	2167	10	FSM	ENSG00000153975.10	ENST00000368576.8	2167	10	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_9	12.7888840621673	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTGTTTTTCTTATCTA	-116666701	True	NA	-1	True	AATAAA	-22	NA	116668766	116635617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_116635880_116645713_116645935_116647458_116647611_116651571_116651738_116652003_116652193_116656683_116656853_116658802_116658925_116660735_116660847_116666633_116667208_116668565
transcript_173760.known	chr6	+	2150	15	FSM	ENSG00000196911.11	ENST00000356348.6	2150	15	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_14	25.2978179263891	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAATGTTTTATGCTTTTT	116679715	True	NA	2	True	AATAAA	-17	NA	116681210	116741866	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_116681339_116689319_116689454_116692054_116692157_116692292_116692393_116698703_116698799_116702018_116702151_116705071_116705161_116716218_116716319_116722125_116722290_116724296_116724376_116725750_116725877_116726494_116726623_116729562_116729742_116732135_116732369_116741505
transcript_173761.known	chr6	+	11288	14	FSM	ENSG00000196911.11	ENST00000368564.7	11288	14	0	0	0	0	multi-exon	FALSE	canonical	1	18	junction_4	19.293436355158	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTTTTATGCTTTTTA	116679715	True	NA	3	True	AATAAA	-18	NA	116681210	116741867	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_116681339_116689319_116689454_116692054_116692157_116692292_116692393_116698703_116698799_116702018_116702151_116705071_116705161_116716218_116716319_116722125_116722290_116724296_116724376_116725750_116725877_116726494_116726623_116729562_116729742_116732135
transcript_173765.known	chr6	-	1032	4	FSM	ENSG00000183807.8	ENST00000368557.6	1032	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	2.82842712474619	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACTTGTGTGTGTGGATT	-116765336	True	NA	-3	True	TATAAA	-16	NA	116765719	116752196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_116752696_116761976_116762086_116765146_116765256_116765404
transcript_173768.known	chr6	+	3614	15	FSM	ENSG00000164465.19	ENST00000338728.10	3614	15	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_12	13.4361680640314	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCCCTGACTCTCACTAG	117481901	True	NA	16	True	AATAAA	-16	NA	117482673	117549797	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_117482894_117503766_117503980_117519815_117519951_117521524_117521577_117525361_117525435_117532259_117532394_117537184_117537226_117538619_117538836_117539254_117539380_117540667_117540816_117540917_117541026_117543123_117543212_117544527_117544578_117545477_117545598_117547906
transcript_173771.known	chr6	-	4590	8	FSM	ENSG00000047932.14	ENST00000052569.10	4590	8	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_6	10.3509833901353	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGGCTTGTTATTTAT	-117596689	True	NA	-4	True	AATAAA	-24	NA	117602528	117560268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_117563385_117566853_117567035_117569571_117569737_117570859_117570956_117573466_117573633_117575176_117575353_117578899_117579065_117602003
transcript_173777.nic	chr6	-	749	3	ISM	ENSG00000047932.14	ENST00000052569.10	4590	8	-25	15050	-11	-15047	5prime_fragment	FALSE	canonical	3	142	junction_1	3	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAGAAGCACAACTTGAA	-117596714	True	NA	NA	False	AAAAAG	-7	NA	117602553	117575318	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_117575353_117578899_117579065_117602003
transcript_173778.nic	chr6	-	716	2	ISM	ENSG00000047932.14	ENST00000535237.2	4460	8	-11	18627	-11	-18627	5prime_fragment	FALSE	canonical	3	148	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAGTTTAGAGAGTGAC	-117596714	True	NA	NA	False	NA	NA	NA	117602553	117578898	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_117579065_117602003
transcript_17378.known	chr1	+	2031	6	FSM	ENSG00000186283.14	ENST00000367627.8	2031	6	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_3	55.2028984746272	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGGCGTACTTTCTGTT	179079323	True	NA	19	True	ATTAAA	-20	NA	179082069	179095996	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_179082388_179082939_179083054_179085627_179085894_179087910_179088090_179094092_179094218_179094967
transcript_173786.known	chr6	+	4796	5	FSM	ENSG00000153989.8	ENST00000368494.4	4796	5	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_1	5.04975246918104	329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAGTCCACATTCAGTTA	117670823	True	NA	102	True	AATAAA	-14	NA	117675468	117710727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_117676086_117693041_117693168_117694030_117694181_117703604_117703705_117706924
transcript_173791.known	chr6	+	4481	7	FSM	ENSG00000196376.11	ENST00000621341.1	4481	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_6	5.43650214343336	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTTTTCTTTTGTGT	NA	False	NA	15	True	AATAAA	-27	NA	118154441	118317676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_118154621_118235508_118235637_118266994_118267155_118275458_118275616_118277493_118277547_118285183_118285339_118314027
transcript_173794.known	chr6	+	5109	8	FSM	ENSG00000196376.11	ENST00000360388.9	5109	8	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	5.87627537177232	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAATTCTTGGTTTTCTTT	117906608	True	NA	10	True	AATAAA	-22	NA	117907263	118317671	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_117907900_118154444_118154621_118235508_118235637_118266994_118267155_118275458_118275616_118277493_118277547_118285183_118285339_118314027
transcript_173795.known	chr6	-	7373	13	FSM	ENSG00000111860.14	ENST00000368491.8	7373	13	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_11	8.17856276425687	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTCCTCTAAGAGCCT	-118650942	True	NA	-20	True	AATAAA	-16	NA	118651591	118460771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_118465569_118469071_118469304_118470536_118470645_118479870_118479922_118480395_118480514_118481778_118481934_118483705_118483859_118491685_118491866_118511297_118511416_118523801_118523921_118565528_118566317_118632452_118632612_118651196
transcript_173797.nic	chr6	-	2138	8	ISM	ENSG00000111860.14	ENST00000368491.8	7373	13	-95	21031	-95	0	5prime_fragment	FALSE	canonical	3	15	junction_6	10.1116219252494	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTTAGTAACTACCGTTC	NA	False	NA	NA	False	GATAAA	-36	NA	118651686	118481802	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_118481934_118483705_118483859_118491685_118491866_118511297_118511416_118523801_118523921_118565528_118566317_118632452_118632612_118651196
transcript_173798.nic	chr6	-	2070	8	ISM	ENSG00000111860.14	ENST00000368491.8	7373	13	-95	21099	-95	-68	5prime_fragment	FALSE	canonical	3	15	junction_6	10.1116219252494	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTGAAGAGATCAAAAAGCA	NA	False	NA	NA	False	AAGAAA	-45	NA	118651686	118481870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_118481934_118483705_118483859_118491685_118491866_118511297_118511416_118523801_118523921_118565528_118566317_118632452_118632612_118651196
transcript_173808.nic	chr6	-	1445	6	NIC	ENSG00000111860.14	novel	1797	9	NA	NA	-88	-1982	combination_of_known_junctions	FALSE	canonical	3	21	junction_5	9.68710483064987	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGAGAAGAATTGAGACCT	-118573754	True	NA	NA	False	AAAAAG	-36	NA	118574156	118483784	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_118483859_118491685_118491866_118511297_118511416_118523801_118523921_118565528_118566317_118573990
transcript_173809.known	chr6	-	2079	6	FSM	ENSG00000111860.14	ENST00000419517.2	2079	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	11.4786758818254	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGTCTGTCATTTACC	NA	False	NA	NA	False	AATAAA	-37	NA	118651857	118491631	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_118491866_118511297_118511416_118523801_118523921_118565528_118566317_118632452_118632612_118651196
transcript_173811.nnic	chr6	+	1158	3	NNC	ENSG00000286339.1	novel	906	3	NA	NA	8677	5458	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	49	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTGATGACTCCGATAA	118572376	True	NA	3	True	AATAAA	-17	NA	118574336	118582298	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_118574700_118576250_118576476_118581728
transcript_173812.nic	chr6	+	953	2	ISM	ENSG00000286339.1	ENST00000659521.1	906	3	8677	0	8677	0	3prime_fragment	FALSE	canonical	3	117	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACGGTACCAAGATGCAAAT	118572376	True	NA	19	True	ATTAAA	-29	NA	118574336	118576840	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_118574700_118576250
transcript_173813.nic	chr6	+	2862	2	ISM	ENSG00000286339.1	ENST00000659521.1	906	3	8677	-1909	8677	1909	3prime_fragment	FALSE	canonical	3	117	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCTCTTTTGTTCGGTGT	118572376	True	NA	-59	True	AATAAA	-11	NA	118574336	118578749	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_118574700_118576250
transcript_173814.nic	chr6	+	2948	2	ISM	ENSG00000286339.1	ENST00000659521.1	906	3	8677	-1995	8677	1995	3prime_fragment	FALSE	canonical	3	117	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGCCTGAGTGCTAGT	118572376	True	NA	27	True	AGTAAA	-18	NA	118574336	118578835	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_118574700_118576250
transcript_173815.known	chr6	-	5219	14	FSM	ENSG00000111877.18	ENST00000619706.5	5219	14	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	14.2093393739395	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGAGTACAAATTTAGTG	-118934059	True	NA	-10	True	AATAAA	-21	NA	118935159	118813454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_118816295_118826146_118826293_118826781_118826865_118827926_118828131_118829047_118829251_118856370_118856546_118911649_118911770_118913294_118913421_118917560_118917762_118922004_118922087_118923810_118924128_118931419_118931739_118932606_118932741_118934890
transcript_173817.known	chr6	-	5101	13	FSM	ENSG00000111877.18	ENST00000316316.10	5101	13	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	15.4243224234396	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTGTGGCTGAGTCTTG	-118934062	True	NA	3	True	AATAAA	-34	NA	118935162	118813441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_118816295_118826146_118826293_118826781_118826865_118827926_118828131_118829047_118829251_118856370_118856546_118911649_118911770_118913294_118913421_118917560_118917762_118922004_118922087_118923810_118924128_118931419_118931739_118934890
transcript_173823.nic	chr6	-	2644	8	ISM	ENSG00000111877.18	ENST00000619706.5	5219	14	-23	97142	-20	0	5prime_fragment	FALSE	canonical	3	40	junction_6	9.37212540963242	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGGAATGTTTCCTAA	NA	False	NA	-1	True	AATAAA	-17	NA	118935182	118910596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_118911770_118913294_118913421_118917560_118917762_118922004_118922087_118923810_118924128_118931419_118931739_118932606_118932741_118934890
transcript_173826.known	chr6	-	2442	7	FSM	ENSG00000111877.18	ENST00000316068.7	2442	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	14.2409815516893	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGGAATGTTTCCTAA	-118934014	True	NA	-1	True	AATAAA	-17	NA	118935114	118910596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_118911770_118913294_118913421_118917560_118917762_118922004_118922087_118923810_118924128_118931419_118931739_118934890
transcript_173829.known	chr6	+	2434	4	FSM	ENSG00000111875.8	ENST00000229595.6	2434	4	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_2	61.584630117154	200	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTCAGTGGTTAATATAA	118889650	True	NA	-71	True	AATAAA	-20	NA	118894151	118909171	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_118894523_118900765_118900882_118905651_118905829_118907401
transcript_173832.known	chr6	-	4048	19	FSM	ENSG00000111879.20	ENST00000621231.4	4048	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	20.1452288870983	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTTTTTATTTTTTTCT	-119077761	True	NA	0	True	AATAAA	-18	NA	119078647	118959828	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_118960185_118961760_118961964_118964666_118964772_118966834_118966953_118974427_118974575_118975023_118975209_118975916_118976045_118979364_118979519_118980137_118980351_119002898_119003050_119003500_119003623_119006446_119006609_119009548_119009574_119011330_119011432_119016746_119016945_119019977_119020160_119022944_119023081_119023958_119024814_119078140
transcript_173835.nic	chr6	-	1472	2	ISM	ENSG00000111879.20	ENST00000621231.4	4048	19	-223	64243	-206	-12895	5prime_fragment	FALSE	canonical	3	44	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTATAGGAAAATTAAAGACA	NA	False	NA	4	True	NA	NA	NA	119078870	119024071	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_119024814_119078140
transcript_173837.nic	chr6	-	842	2	ISM	ENSG00000111879.20	ENST00000621231.4	4048	19	-223	64873	-206	-13525	5prime_fragment	FALSE	canonical	3	44	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTGCAGTATAAAAGCAAA	NA	False	NA	NA	False	AAGAAA	-34	NA	119078870	119024701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_119024814_119078140
transcript_173838.known	chr6	-	5018	13	FSM	ENSG00000111885.7	ENST00000368468.4	5018	13	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	8.09320702811932	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTGTTATATTTTTCT	-119348582	True	NA	NA	False	AATAAA	-18	NA	119349761	119177204	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_119179946_119180311_119180428_119188404_119188578_119189663_119189884_119193776_119193893_119201253_119201348_119204758_119204883_119248259_119248355_119290682_119290764_119301987_119302104_119306895_119306993_119348462_119349288_119349541
transcript_17384.nic	chr1	+	1794	5	NIC	ENSG00000186283.14	novel	2031	6	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	123.7770172528	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGGCGTACTTTCTGTT	179079294	True	NA	19	True	ATTAAA	-20	NA	179082040	179095996	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_179082388_179082939_179083054_179087910_179088090_179094092_179094218_179094967
transcript_173842.known	chr6	-	4431	33	FSM	ENSG00000146350.14	ENST00000275159.10	4431	33	0	0	0	0	multi-exon	TRUE	non_canonical	2	7	junction_13	3.24458683810435	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-121334107	False	NA	NA	False	NA	NA	NA	121334430	121080236	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_121080891_121090852_121091042_121106022_121106164_121112504_121112660_121113061_121113178_121115171_121115242_121126377_121126462_121131626_121131753_121160009_121160104_121160947_121161057_121170404_121170528_121205074_121205164_121223235_121223353_121239069_121239189_121241464_121241553_121242200_121242340_121255327_121255411_121256083_121256286_121279120_121279246_121281543_121281687_121283817_121283911_121292052_121292194_121294569_121294661_121299445_121299506_121303616_121303762_121304364_121304427_121304521_121304626_121304754_121304834_121307975_121308102_121310778_121310848_121317494_121317673_121321632_121321795_121334275
transcript_173844.known	chr6	+	3083	2	FSM	ENSG00000152661.9	ENST00000282561.4	3083	2	0	0	0	0	multi-exon	FALSE	canonical	3	1171	junction_1	0	1248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTATATTCCGTGTGAT	121407421	True	NA	20	True	AATAAA	-23	NA	121435645	121449727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_121435833_121446831
transcript_173845.known	chr6	+	2950	2	FSM	ENSG00000152661.9	ENST00000649003.1	2950	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATAAACATAGCTTCTAT	121407370	True	NA	8	True	AATAAA	-11	NA	121435594	121449715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_121435661_121446831
transcript_173846.known	chr6	+	2596	13	FSM	ENSG00000025156.13	ENST00000368455.9	2596	13	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_11	32.939654420369	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACAAGGGAGAAATATAAT	122397692	True	NA	NA	False	AATATA	-11	NA	122399651	122433119	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_122399831_122412372_122412482_122412636_122412765_122413524_122413650_122416220_122416297_122419167_122419230_122420134_122420223_122422149_122422299_122422717_122422958_122423580_122423687_122427902_122427957_122431429_122431515_122431924
transcript_173848.known	chr6	+	2643	12	FSM	ENSG00000025156.13	ENST00000452194.5	2643	12	0	0	0	0	multi-exon	TRUE	canonical	3	87	junction_10	13.6678424542929	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACAAGGGAGAAATATAAT	122397591	True	NA	NA	False	AATATA	-11	NA	122399550	122433119	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_122399831_122412372_122412482_122412636_122412765_122413524_122413650_122416220_122416297_122419167_122419230_122420134_122420223_122422149_122422299_122422717_122422958_122423580_122423687_122431429_122431515_122431924
transcript_173849.known	chr6	-	2435	1	FSM	ENSG00000279453.1	ENST00000624649.1	2435	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGTTTTTGTCCACTCA	-122439208	False	NA	-6	True	AATAAA	-19	NA	122439223	122436788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_122436800_122439200
transcript_173851.known	chr6	-	3125	10	FSM	ENSG00000111897.7	ENST00000339697.5	3125	10	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_2	24.6215804168259	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTAGTGTACTGATTAT	-122468991	True	NA	-4	True	AATAAA	-15	NA	122471807	122443350	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_122445180_122446773_122447005_122447120_122447266_122451663_122451755_122451887_122452058_122453769_122453908_122454150_122454231_122456480_122456651_122458519_122458682_122471698
transcript_173859.nic	chr6	+	1474	7	NIC	ENSG00000135549.15	novel	464	5	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	68.7719661877813	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGGTCTGTGTATGTG	122481227	True	NA	10	True	ATTAAA	-21	NA	122482032	122725890	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_122482267_122585492_122585554_122585920_122586008_122633282_122633368_122675077_122675145_122717786_122717964_122725127
transcript_17386.nnic	chr1	+	1690	4	NIC	ENSG00000186283.14	novel	2031	6	NA	NA	-39	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	150.754399235607	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGGCGTACTTTCTGTT	179079284	True	NA	19	True	ATTAAA	-20	NA	179082030	179095996	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_179082388_179087910_179088090_179094092_179094218_179094967
transcript_173860.nnic	chr6	+	1533	7	NNC	ENSG00000135549.15	novel	464	5	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	65.7512146064407	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGGTCTGTGTATGTG	122481227	True	NA	10	True	ATTAAA	-21	NA	122482032	122725890	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_122482267_122585920_122586008_122603503_122603624_122633282_122633368_122675077_122675145_122717786_122717964_122725127
transcript_173863.nnic	chr6	+	1413	6	NIC	ENSG00000135549.15	novel	464	5	NA	NA	-46	0	combination_of_known_splicesites	FALSE	canonical	3	142	junction_2	9.62496753241277	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGGTCTGTGTATGTG	122481227	True	NA	10	True	ATTAAA	-21	NA	122482032	122725890	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_122482267_122585920_122586008_122633282_122633368_122675077_122675145_122717786_122717964_122725127
transcript_173864.nnic	chr6	+	1895	6	NIC	ENSG00000135549.15	novel	464	5	NA	NA	-46	0	combination_of_known_splicesites	FALSE	canonical	3	142	junction_2	9.62496753241277	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAAGTCTCCTTCATTTT	122481227	True	NA	18	True	AATAAA	-31	NA	122482032	122726372	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_122482267_122585920_122586008_122633282_122633368_122675077_122675145_122717786_122717964_122725127
transcript_173868.known	chr6	+	785	4	FSM	ENSG00000164434.12	ENST00000368444.8	785	4	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_3	14.5143607047182	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTGTTGTTTCTAATA	122778386	True	NA	15	True	AATAAA	-17	NA	122779715	122784074	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_122779868_122780290_122780464_122781092_122781195_122783716
transcript_173869.known	chr6	+	1763	8	FSM	ENSG00000172594.13	ENST00000368440.5	1763	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	4.13052351280027	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGATGAAGTTTTCTTAAC	122788894	True	NA	7	True	AATAAA	-21	NA	122789257	122809720	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_122789459_122795676_122795891_122796823_122796969_122801309_122801407_122803663_122803834_122804908_122805090_122806232_122806358_122809090
transcript_173870.known	chr6	+	1755	7	FSM	ENSG00000172594.13	ENST00000539041.5	1755	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	4.19324854180304	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGATGAAGTTTTCTT	122787719	False	NA	4	True	AATAAA	-18	NA	122789048	122809717	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_122789459_122796823_122796969_122801309_122801407_122803663_122803834_122804908_122805090_122806232_122806358_122809090
transcript_173877.nnic	chr6	-	989	8	NNC	ENSG00000186439.14	novel	1179	8	NA	NA	49189	-112	at_least_one_novel_splicesite	FALSE	canonical	3	150	junction_1	58.9125952369357	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAGGACAAAGAGAAAGCAG	-123583230	True	NA	-44	True	AGTAAA	-37	NA	123587720	123503762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_123503902_123512302_123512363_123516140_123516207_123530505_123530566_123547339_123547373_123548453_123548613_123570922_123571133_123587458
transcript_173878.nnic	chr6	-	957	8	NNC	ENSG00000186439.14	novel	1179	8	NA	NA	49110	-223	at_least_one_novel_splicesite	FALSE	canonical	3	150	junction_1	58.9125952369357	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGTGAAGAAAAGACTAAAA	-123587783	True	NA	NA	False	AAGAAA	-18	NA	123587799	123503873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_123503902_123512302_123512363_123516140_123516207_123530505_123530566_123547339_123547373_123548453_123548613_123570922_123571133_123587458
transcript_17388.known	chr1	-	3240	13	FSM	ENSG00000143322.21	ENST00000511413.5	3240	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	3.85411035994906	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGTTAGCCTGGTGGGA	-179229378	False	NA	-117	True	NA	NA	NA	179229397	179107717	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_179108899_179109207_179109442_179110281_179110456_179112308_179112399_179114877_179115031_179117331_179117517_179118586_179118765_179120189_179120275_179121594_179121868_179126376_179126673_179131310_179131482_179133311_179133375_179229240
transcript_173880.nnic	chr6	-	825	7	NNC	ENSG00000186439.14	novel	1179	8	NA	NA	49189	-8677	at_least_one_novel_splicesite	FALSE	canonical	3	153	junction_1	54.8533398152646	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGAAACAAAGACACTGGC	-123583230	True	NA	NA	False	AAAAAG	-6	NA	123587720	123512327	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_123512363_123516140_123516207_123530505_123530566_123547339_123547373_123548453_123548613_123570922_123571133_123587458
transcript_173885.nnic	chr6	-	780	6	NNC	ENSG00000186439.14	novel	1179	8	NA	NA	49199	-12490	at_least_one_novel_splicesite	FALSE	canonical	3	173	junction_1	44.5394207416307	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGAAGTTACTTTTATTA	-123583220	True	NA	NA	False	AAAAAG	-43	NA	123587710	123516140	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_123516207_123530505_123530566_123547339_123547373_123548453_123548613_123570922_123571133_123587458
transcript_173891.nnic	chr6	-	810	5	NNC	ENSG00000186439.14	novel	1294	6	NA	NA	49110	-1785	at_least_one_novel_splicesite	FALSE	canonical	3	238	junction_1	23.2217570394662	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTTATGTTTATTCT	-123587783	True	NA	NA	False	AATACA	-16	NA	123587799	123530498	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_123530566_123547339_123547373_123548453_123548613_123570922_123571133_123587458
transcript_173892.nnic	chr6	-	669	4	NNC	ENSG00000186439.14	novel	1294	6	NA	NA	49183	-18627	at_least_one_novel_splicesite	FALSE	canonical	3	268	junction_1	14.8398861930347	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTAGTTGTTTTCACCTTT	-123583236	True	NA	NA	False	AATAGA	-23	NA	123587726	123547340	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_123547373_123548453_123548613_123570922_123571133_123587458
transcript_173893.nnic	chr6	-	1840	2	NNC	ENSG00000186439.14	novel	1294	6	NA	NA	49194	-40836	at_least_one_novel_splicesite	FALSE	canonical	3	303	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCCAGTCTTAAGTATTT	-123583225	True	NA	NA	False	ATTAAA	-18	NA	123587715	123569549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_123571133_123587458
transcript_173895.known	chr6	+	11433	6	FSM	ENSG00000146373.17	ENST00000521654.7	11433	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	3.24961536185438	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTCTTTTTTTCCAAT	124962412	False	NA	8	True	AATAAA	-19	NA	124962436	125092633	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_124963427_125045210_125045445_125057941_125058107_125076656_125076859_125081435_125081508_125082863
transcript_17390.known	chr1	-	12217	12	FSM	ENSG00000143322.21	ENST00000502732.6	12217	12	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_10	4.01855201914552	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGCTGGAGATTGGAGTG	-179227655	True	NA	-11	True	AATAAA	-24	NA	179229677	179099329	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_179109442_179110281_179110456_179112308_179112399_179114877_179115031_179117331_179117517_179118586_179118765_179120189_179120275_179121594_179121868_179126376_179126673_179131310_179131482_179133311_179133375_179229240
transcript_173903.known	chr6	+	1468	8	FSM	ENSG00000111907.21	ENST00000304877.17	1468	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	74.2301990363733	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAATTCTTAATTTCTT	NA	False	NA	7	True	ATTAAA	-18	NA	125153648	125263497	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_125153971_125220077_125220194_125229117_125229267_125248281_125248384_125252021_125252037_125253716_125253756_125257097_125257159_125262833
transcript_173905.known	chr6	+	1308	6	FSM	ENSG00000111907.21	ENST00000368402.9	1308	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	64.7722162659269	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAATTCTTAATTTCTT	125151251	True	NA	7	True	ATTAAA	-18	NA	125153732	125263497	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_125153971_125220077_125220194_125229117_125229267_125248281_125248384_125253716_125253756_125262833
transcript_173906.known	chr6	+	2147	5	FSM	ENSG00000111907.21	ENST00000368388.6	2147	5	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_4	40.4250850339242	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATGGAGCATGACAATCT	125151283	True	NA	NA	False	AGTAAA	-26	NA	125153764	125264407	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_125153971_125220077_125220194_125229117_125229267_125248281_125248384_125262833
transcript_173907.known	chr6	+	581	4	FSM	ENSG00000111907.21	ENST00000392483.6	581	4	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_3	18.5532267334343	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTTTATTTTAATGGA	125151367	True	NA	NA	False	NA	NA	NA	125153848	125248475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_125153971_125220077_125220194_125229117_125229267_125248281
transcript_17391.known	chr1	-	3177	12	FSM	ENSG00000143322.21	ENST00000507173.5	3177	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	3.64997452725177	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGTTAGCCTGGTGGGA	-179229378	False	NA	-117	True	NA	NA	NA	179229397	179107717	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_179108899_179109207_179109442_179110281_179110456_179112308_179112399_179114877_179115031_179117331_179117517_179118586_179118765_179120189_179120275_179121594_179121868_179126376_179126673_179131310_179131482_179229240
transcript_173917.nnic	chr6	-	809	5	NNC	ENSG00000111906.18	novel	1350	5	NA	NA	-71	0	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_4	338.922557526052	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAGAATATTTATTGGAG	NA	False	NA	-30	True	AATAAA	-21	NA	125302149	125275881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_125276244_125277101_125277241_125292840_125292910_125300537_125300660_125302032
transcript_173920.known	chr6	-	509	5	FSM	ENSG00000237742.8	ENST00000606334.6	528	5	15	4	15	-4	multi-exon	FALSE	canonical	2	5	junction_2	9.28372231381357	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTTATCACATATCTTC	-125745422	True	NA	-2	True	AATAAA	-21	NA	125745610	125578557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_125578726_125645633_125645701_125720423_125720508_125744901_125745066_125745584
transcript_173925.nnic	chr6	-	2398	4	Antisense	novelGene_ENSG00000224506.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_2	50.2792203599061	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCCCACATAGCCAAAGCA	-125702462	True	NA	19	True	AAAAAG	-5	NA	125707418	125687835	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr6_-_125689647_125694166_125694399_125705044_125705147_125707165
transcript_173929.nnic	chr6	-	2296	3	Antisense	novelGene_ENSG00000224506.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	101	junction_2	14.5	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCCCACATAGCCAAAGCA	-125702462	True	NA	19	True	AAAAAG	-5	NA	125707418	125687835	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr6_-_125689647_125694166_125694399_125707165
transcript_173932.nnic	chr6	-	780	3	Antisense	novelGene_ENSG00000224506.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_1	11	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-125702462	True	NA	NA	False	AATAAA	-22	NA	125707418	125701883	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr6_-_125702309_125705044_125705147_125707165
transcript_173937.nnic	chr6	-	422	2	Antisense	novelGene_ENSG00000224506.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	101	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAACTGAAAGAATTCAC	-125702462	True	NA	NA	False	NA	NA	NA	125707418	125694229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr6_-_125694399_125707165
transcript_17394.known	chr1	-	3486	11	FSM	ENSG00000143322.21	ENST00000367623.8	3486	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	3.8262252939418	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGTTAGCCTGGTGGGA	-179229378	False	NA	-117	True	NA	NA	NA	179229397	179107717	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_179109442_179110281_179110456_179112308_179112399_179114877_179115031_179117331_179117517_179118586_179118765_179120189_179120275_179121594_179121868_179126376_179126673_179131310_179131482_179229240
transcript_173948.known	chr6	+	2626	5	FSM	ENSG00000135547.9	ENST00000368364.4	2626	5	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_3	18.6212244495361	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTATGTGGATGAGTTG	125748264	True	NA	6	True	ATTAAA	-19	NA	125749631	125761269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_125749860_125751800_125751880_125752006_125752091_125754464_125754547_125759116
transcript_173953.nic	chr6	+	620	3	ISM	ENSG00000111912.20	ENST00000417494.5	765	6	-211	26017	-211	-54	5prime_fragment	FALSE	canonical	3	16	junction_1	2	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATCAGTTAAAGGAGATC	125790707	True	NA	NA	False	AATATA	-28	NA	125790728	125855186	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_125791068_125815290_125815405_125855019
transcript_173955.known	chr6	+	3325	5	FSM	ENSG00000111911.7	ENST00000229633.7	3325	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	3.56195171219375	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTGTCTGGACTTTT	125955207	True	NA	16	True	AATAAA	-21	NA	125956769	125980244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_125957179_125966886_125967005_125972258_125972329_125974846_125974974_125977643
transcript_173969.nic	chr6	+	2320	14	NIC	ENSG00000066651.20	novel	2093	15	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	17	junction_9	114.104125601531	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCATATCTAGTTGTC	125981460	True	NA	17	True	AATAAA	-22	NA	125986479	126039276	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_125986623_125993756_125993823_125995966_125996041_125998052_125998135_125998222_125998316_125998549_125998685_125999456_125999614_126008391_126008473_126008656_126008746_126010924_126011418_126012770_126012853_126012969_126013102_126021159_126021281_126038704
transcript_173973.known	chr6	+	1843	13	FSM	ENSG00000066651.20	ENST00000334379.11	1843	13	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_7	38.6465464893767	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCATATCTAGTTGTC	125981520	True	NA	17	True	AATAAA	-22	NA	125986539	126039276	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_125986623_125993756_125993823_125995966_125996041_125998052_125998135_125998222_125998316_125998549_125998685_125999456_125999614_126008391_126008473_126011252_126011418_126012770_126012853_126012969_126013102_126021159_126021281_126038704
transcript_173975.nic	chr6	+	2062	13	NIC	ENSG00000066651.20	novel	1843	13	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	91.102925614689	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCATATCTAGTTGTC	125981452	True	NA	17	True	AATAAA	-22	NA	125986471	126039276	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_125986774_125993756_125993823_125995966_125996041_125998052_125998135_125998222_125998316_125998549_125998685_125999456_125999614_126008391_126008473_126011252_126011418_126012770_126012853_126012969_126013102_126021159_126021281_126038704
transcript_17398.nic	chr1	-	1057	3	ISM	ENSG00000143322.21	ENST00000511413.5	3240	13	-292	23219	-5	212	5prime_fragment	FALSE	canonical	1	1	junction_1	2.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCCTGAAATACATTTTT	-179227667	True	NA	NA	False	AAAAAG	-16	NA	179229689	179130936	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_179131482_179133311_179133375_179229240
transcript_173984.known	chr6	+	657	7	FSM	ENSG00000066651.20	ENST00000446681.1	657	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	124.243041387972	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATGGATGCTGGTTTGTC	125981533	False	NA	NA	False	AATACA	-1	NA	125986552	125999525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_125986691_125993756_125993823_125995966_125996041_125998052_125998135_125998222_125998316_125998549_125998685_125999456
transcript_173985.known	chr6	+	809	3	FSM	ENSG00000203760.9	ENST00000368328.5	809	3	0	0	0	0	multi-exon	FALSE	canonical	3	1732	junction_2	67	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAATGCAGTCAAATCTAG	126317522	True	NA	91	True	AAGAAA	-2	NA	126340114	126348875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_126340400_126346204_126346319_126348465
transcript_173986.known	chr6	+	528	3	FSM	ENSG00000203760.9	ENST00000368325.5	528	3	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	809.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTTTGTATTTTTT	126317581	True	NA	21	True	ATTAAA	-17	NA	126340173	126348608	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_126340445_126346204_126346319_126348465
transcript_173993.known	chr6	+	2169	5	FSM	ENSG00000118518.17	ENST00000608991.5	2169	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	36.9552093756753	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGTCTCTTGTTTGAG	127264408	True	NA	29	True	AATAAA	-20	NA	127266882	127288362	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_127266926_127280230_127280341_127285207_127285349_127286049_127286178_127286615
transcript_173994.known	chr6	+	568	5	FSM	ENSG00000118518.17	ENST00000610162.5	568	5	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_3	38.7257988942772	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATAAACATGCTTCCTAC	127264408	True	NA	NA	False	NA	NA	NA	127266882	127286643	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_127267096_127280230_127280341_127280515_127280605_127286049_127286178_127286615
transcript_173996.known	chr6	+	843	5	FSM	ENSG00000118518.17	ENST00000480444.1	843	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	42.0059519592164	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAGAGGAAATGGTGAAT	127264413	True	NA	NA	False	NA	NA	NA	127266887	127286903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_127267096_127280230_127280341_127282286_127282396_127286049_127286178_127286615
transcript_173997.nic	chr6	+	2380	5	NIC	ENSG00000118518.17	novel	2169	5	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_2	38.5129848233034	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGTCTCTTGTTTGAG	127264367	True	NA	29	True	AATAAA	-20	NA	127266841	127288362	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_127267096_127280230_127280341_127285207_127285349_127286049_127286178_127286615
transcript_174000.known	chr6	+	2267	4	FSM	ENSG00000118518.17	ENST00000356799.6	2267	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	13.8884444373331	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGTGAGACTTAAAATTC	127264374	True	NA	NA	False	AATAAA	-23	NA	127266848	127288567	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_127266926_127280230_127280341_127286049_127286178_127286615
transcript_174001.known	chr6	+	884	4	FSM	ENSG00000118518.17	ENST00000476956.5	884	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	13.0724477007517	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCAAGGCAGCAAGTAGAG	127266679	False	NA	NA	False	NA	NA	NA	127266725	127286891	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_127267096_127280230_127280341_127286049_127286178_127286615
transcript_174003.known	chr6	+	2119	3	FSM	ENSG00000118518.17	ENST00000368314.6	2119	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	9	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAGCCTGTGAGACTTAA	127264389	True	NA	NA	False	AATAAA	-18	NA	127266863	127288562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_127266926_127280230_127280341_127286615
transcript_174004.known	chr6	+	2070	3	FSM	ENSG00000118518.17	ENST00000610153.1	2070	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	13.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGTCTCTTGTTTGAG	127264408	True	NA	29	True	AATAAA	-20	NA	127266882	127288362	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_127267096_127280230_127280341_127286615
transcript_174006.known	chr6	+	610	3	FSM	ENSG00000118518.17	ENST00000489534.5	610	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	22	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGCAGTACGATGAGCGC	127264408	True	NA	NA	False	AAGAAA	-6	NA	127266882	127286953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_127267045_127280230_127280341_127286615
transcript_174008.known	chr6	-	854	7	FSM	ENSG00000093144.19	ENST00000368292.10	854	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	278.446084946839	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCAGAGAGCTATATTTG	-127343339	False	3761	NA	False	NA	NA	NA	127343359	127289987	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_127290278_127314815_127314897_127315933_127315975_127316449_127316503_127327001_127327145_127330808_127331031_127343335
transcript_17401.known	chr1	+	6840	16	FSM	ENSG00000057252.13	ENST00000367619.8	6840	16	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_15	10.0642381176564	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTTTTCTGATTCATT	179293382	True	NA	7	True	ATTAAA	-19	NA	179293796	179358680	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_179293937_179302676_179302803_179323436_179323496_179335505_179335658_179337836_179337897_179339437_179339546_179341027_179341311_179342113_179342193_179342861_179342944_179343589_179343636_179344946_179345077_179347599_179347698_179348843_179348943_179350295_179350432_179351316_179351463_179353584
transcript_174012.known	chr6	-	1009	7	FSM	ENSG00000093144.19	ENST00000430841.6	1009	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	280.191601111335	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTTTTCGTGTGGATGT	-127343378	False	NA	-110	True	AATAAA	-4	NA	127343398	127289868	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_127290278_127314815_127314897_127316449_127316503_127327001_127327145_127330808_127331031_127331829_127331868_127343335
transcript_174016.known	chr6	-	2585	6	FSM	ENSG00000093144.19	ENST00000531967.5	2585	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	276.494918578986	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTGTGTAAAGTGAATT	-127342855	False	NA	-1	True	AATAAA	-22	NA	127342875	127288711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_127290278_127314815_127314897_127316449_127316503_127327001_127327145_127330808_127331031_127342355
transcript_174017.known	chr6	-	2443	6	FSM	ENSG00000093144.19	ENST00000474289.6	2443	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	276.957758512016	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTACAACATTTTGTGTAA	-127343326	False	NA	-9	True	AATAAA	-14	NA	127343346	127288719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_127290278_127314815_127314897_127316449_127316503_127327001_127327145_127330808_127331031_127342960
transcript_174018.known	chr6	-	2339	6	FSM	ENSG00000093144.19	ENST00000454859.8	2339	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	226.621799480986	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTGTGTAAAGTGAATT	-127343589	False	NA	-1	True	AATAAA	-22	NA	127343609	127288711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_127290278_127314815_127314897_127316449_127316503_127327001_127327145_127330808_127331031_127343335
transcript_174022.known	chr6	-	1515	5	FSM	ENSG00000093144.19	ENST00000454591.6	1515	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	269.517160863645	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTAGCCATGACATGGAA	-127339801	True	NA	NA	False	ACTAAA	-3	NA	127343562	127289266	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_127290278_127314815_127314897_127316449_127316503_127327001_127327145_127343335
transcript_174024.nic	chr6	-	2305	5	NIC	ENSG00000093144.19	novel	2339	6	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	253.109042706893	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTGTGTAAAGTGAATT	-127343604	False	NA	-1	True	AATAAA	-22	NA	127343624	127288711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_127290278_127314815_127314897_127326997_127327145_127330808_127331031_127343335
transcript_174027.nic	chr6	-	1236	5	NIC	ENSG00000093144.19	novel	1354	5	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	253.109042706893	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTGAAGGCTACTATTAA	-127343603	False	NA	-21	True	ATTAAA	-17	NA	127343623	127289779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_127290278_127314815_127314897_127326997_127327145_127330808_127331031_127343335
transcript_174029.known	chr6	-	1966	4	FSM	ENSG00000093144.19	ENST00000368295.8	1966	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	290.669342495329	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCCATAGATGTAAAAACTA	NA	False	NA	-51	True	NA	NA	NA	127331030	127288761	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_127290278_127314815_127314897_127326997_127327145_127330808
transcript_174030.nic	chr6	-	4260	6	ISM	ENSG00000255330.9	ENST00000481848.6	11464	12	-301	36172	-301	-20708	5prime_fragment	FALSE	canonical	2	11	junction_1	18.5752523536021	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAACAGAATTGATGGCA	-127519206	True	NA	NA	False	AATAAA	-2	NA	127519302	127474577	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_127476469_127482912_127482985_127512890_127513050_127514822_127515048_127515513_127516703_127518578
transcript_174036.nic	chr6	-	2264	4	ISM	ENSG00000255330.9	ENST00000481848.6	11464	12	-371	74588	-371	-59124	5prime_fragment	FALSE	canonical	3	12	junction_3	18.4028983224563	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAACAACAACAGAAGATG	NA	False	NA	NA	False	AAGAAA	-2	NA	127519372	127512993	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_127513050_127514822_127515048_127515513_127516703_127518578
transcript_174037.known	chr6	-	4651	30	FSM	ENSG00000152894.15	ENST00000368215.7	4651	30	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_17	29.0266186417584	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGAGTTCATACTTTCTA	-128520340	True	NA	NA	False	NA	NA	NA	128520358	127969895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_127970281_127973021_127973158_127973663_127973828_127976656_127976783_127976922_127977055_127981115_127981290_127982830_127982981_127983241_127983378_127985720_127985876_127990768_127990886_127991293_127991392_127992672_127992710_127995461_127995539_127996900_127996989_127998719_127998905_128005083_128005245_128009129_128009266_128064757_128064795_128067518_128067793_128078812_128078919_128082436_128082639_128083714_128083825_128089689_128089993_128184431_128184726_128218921_128219097_128240034_128240151_128242520_128242603_128322038_128322311_128397565_128397689_128520258
transcript_17404.known	chr1	+	3745	18	FSM	ENSG00000162782.16	ENST00000444136.6	3745	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	0.911290199107627	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTGATCTATATTTGG	179591806	True	NA	NA	False	GATAAA	-19	NA	179591831	179691272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_179592126_179592601_179592848_179593459_179593868_179595627_179595819_179618598_179618683_179621034_179621092_179630766_179630921_179634456_179634630_179635666_179635888_179639838_179640052_179640378_179640446_179650866_179651068_179652038_179652198_179654200_179654363_179662103_179662287_179663347_179663492_179669193_179669405_179690695
transcript_174041.nic	chr6	-	2604	14	ISM	ENSG00000152894.15	ENST00000524481.5	3157	19	-33	9146	-16	-4156	5prime_fragment	FALSE	canonical	3	115	junction_6	16.4698038200163	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTAAGGCCTAATATTGT	NA	False	NA	NA	False	NA	NA	NA	128520632	128009132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_128009269_128064757_128064795_128067518_128067793_128078812_128078919_128082436_128082639_128083714_128083825_128089689_128089993_128184431_128184726_128218921_128219097_128240034_128240151_128242520_128242603_128322038_128322311_128397565_128397689_128520258
transcript_174048.nic	chr6	-	2063	7	ISM	ENSG00000152894.15	ENST00000524534.5	2441	14	-101	120353	0	643	5prime_fragment	FALSE	canonical	3	124	junction_1	17.2787602435926	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTATATAACCACACATCC	NA	False	NA	NA	False	ATTAAA	-4	NA	128520616	128183788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_128184726_128218921_128219097_128240034_128240151_128242520_128242603_128322038_128322311_128397565_128397689_128520258
transcript_174051.known	chr6	-	1722	3	FSM	ENSG00000152894.15	ENST00000525459.1	1722	3	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_1	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTGAGTTGAGTTTTC	NA	False	NA	NA	False	AAAAAG	-22	NA	128520587	128321040	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_128322311_128397565_128397689_128520258
transcript_174054.known	chr6	-	526	2	FSM	ENSG00000152894.15	ENST00000368202.4	526	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAATCGTTTATTTCCCT	NA	False	NA	NA	False	AATAAA	-20	NA	128520570	128518927	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_128519142_128520258
transcript_174056.known	chr6	-	4414	15	FSM	ENSG00000146376.11	ENST00000368149.3	4414	15	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	6.26335308255368	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGAATTCTTAAAGGAG	-129709681	True	NA	4	True	AATAAA	-29	NA	129710177	129576131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_129578605_129580069_129580132_129583987_129584113_129599215_129599357_129600641_129600849_129605876_129605960_129607892_129608053_129611532_129611611_129616211_129616304_129618686_129618853_129629352_129629523_129634041_129634106_129638393_129638630_129641815_129642019_129710023
transcript_17406.known	chr1	+	3525	17	FSM	ENSG00000162782.16	ENST00000294848.12	3525	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	0.863767185067828	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTGATCTATATTTGG	179591864	False	NA	NA	False	GATAAA	-19	NA	179591889	179691272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_179592126_179592601_179592848_179593459_179593868_179595627_179595819_179618598_179618683_179621034_179621092_179630766_179630921_179634456_179634630_179635666_179635888_179639838_179640052_179640378_179640446_179650866_179651068_179652038_179652198_179662103_179662287_179663347_179663492_179669193_179669405_179690695
transcript_174061.nic	chr6	-	1506	11	ISM	ENSG00000146376.11	ENST00000368149.3	4414	15	-48	24665	-48	-22378	5prime_fragment	FALSE	canonical	3	23	junction_8	6.08604962188118	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAGTCATGAATGTAGCA	-129709729	True	NA	NA	False	AATAAA	-14	NA	129710225	129600796	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_129600849_129605876_129605960_129607892_129608053_129611532_129611611_129616211_129616304_129618686_129618853_129629352_129629523_129634041_129634106_129638393_129638630_129641815_129642019_129710023
transcript_174064.known	chr6	+	4206	23	FSM	ENSG00000198945.8	ENST00000361794.7	4206	23	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	13.7209497779825	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTTTTTACATATGTAT	130017435	True	NA	103	True	AATAAA	-13	NA	130018580	130141438	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_130018665_130022226_130022306_130042684_130042802_130049281_130049394_130049755_130049831_130051248_130051409_130052858_130052992_130055170_130055256_130057405_130057498_130060035_130060141_130066352_130066489_130068329_130068422_130070975_130071128_130078557_130078635_130083619_130083706_130086139_130086251_130092744_130092860_130094264_130094368_130104425_130104576_130120878_130120959_130133451_130133622_130133842_130133906_130139609
transcript_174066.nic	chr6	+	3321	23	NIC	ENSG00000198945.8	novel	762	7	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	16.107336247553	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTAGGTAGTGTATTTT	130019172	True	NA	NA	False	AATAAA	-16	NA	130019311	130140485	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_130019464_130022226_130022306_130042684_130042802_130049281_130049394_130049755_130049831_130051248_130051409_130052858_130052992_130055170_130055256_130057405_130057498_130060035_130060141_130066352_130066489_130068329_130068422_130070975_130071128_130078557_130078635_130083619_130083706_130086139_130086251_130092744_130092860_130094264_130094368_130104425_130104576_130120878_130120959_130133451_130133622_130133842_130133906_130139609
transcript_174067.known	chr6	+	3165	22	FSM	ENSG00000198945.8	ENST00000533560.5	3165	22	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	14.6233125467956	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATAAATTAGGTAGTGT	130017443	True	NA	NA	False	AATAAA	-11	NA	130018588	130140480	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_130018665_130022226_130022306_130042684_130042802_130049281_130049394_130051248_130051409_130052858_130052992_130055170_130055256_130057405_130057498_130060035_130060141_130066352_130066489_130068329_130068422_130070975_130071128_130078557_130078635_130083619_130083706_130086139_130086251_130092744_130092860_130094264_130094368_130104425_130104576_130120878_130120959_130133451_130133622_130133842_130133906_130139609
transcript_174077.known	chr6	-	2377	14	FSM	ENSG00000164483.17	ENST00000368134.6	2377	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	2.54660697803798	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGTCGATTTATTTTGA	-130365378	False	55	NA	False	AATAAA	-17	NA	130365425	130144314	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_130144805_130145339_130145423_130146009_130146182_130154824_130155026_130175840_130176009_130184102_130184188_130184437_130184624_130209494_130209609_130214336_130214527_130215194_130215295_130216570_130216617_130222693_130222814_130312977_130313094_130365119
transcript_174081.known	chr6	+	3233	3	FSM	ENSG00000164484.12	ENST00000296978.4	3233	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGTTTTCCTTTAAG	130364847	True	NA	28	True	AATAAA	-29	NA	130366016	130443067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_130366525_130385172_130385237_130440406
transcript_174087.known	chr6	+	2899	2	FSM	ENSG00000164484.12	ENST00000617887.4	2899	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAATTTTCATGTTTTCC	130366269	False	NA	22	True	AATAAA	-23	NA	130366280	130443061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_130366525_130440406
transcript_174095.known	chr6	-	4247	18	FSM	ENSG00000079819.19	ENST00000628542.2	4247	18	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_17	45.3022147078865	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCACTTCTCTTTTTCT	-131057556	True	NA	-3	True	AATAAA	-19	NA	131063322	130839346	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_130840599_130858130_130858244_130863637_130863719_130865535_130865635_130867458_130867582_130869562_130870127_130885095_130885269_130890293_130890467_130894343_130894442_130894966_130895120_130899490_130899579_130900961_130901181_130904464_130904541_130908820_130908864_130926604_130926710_130955104_130955318_130955993_130956500_131063154
transcript_174097.known	chr6	-	3914	18	FSM	ENSG00000079819.19	ENST00000530481.5	3914	18	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_5	98.8083321648043	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCACTTCTCTTTTTCT	-131057459	True	NA	-3	True	AATAAA	-19	NA	131063225	130839346	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_130840599_130858130_130858244_130863637_130863719_130865535_130865635_130867458_130867582_130869811_130870127_130885095_130885269_130890293_130890467_130894343_130894442_130894966_130895120_130899490_130899579_130900961_130901181_130904464_130904541_130908820_130908864_130926604_130926710_130955104_130955318_130955993_130956500_131063141
transcript_174099.nic	chr6	-	4145	17	NIC	ENSG00000079819.19	novel	4247	18	NA	NA	-1	0	intron_retention	FALSE	canonical	3	35	junction_3	82.5733575374043	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCACTTCTCTTTTTCT	-131057553	True	NA	-3	True	AATAAA	-19	NA	131063319	130839346	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_130840599_130858130_130858244_130863637_130863719_130867458_130867582_130869562_130870127_130885095_130885269_130890293_130890467_130894343_130894442_130894966_130895120_130899490_130899579_130900961_130901181_130904464_130904541_130908820_130908864_130926604_130926710_130955104_130955318_130955993_130956500_131063154
transcript_1741.known	chr1	-	6358	4	FSM	ENSG00000227372.12	ENST00000452079.5	6358	4	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_2	48.5615302705982	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGGAGTGGATGTTTGTG	-3741524	True	NA	-3	True	ATTAAA	-17	NA	3747322	3735983	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3740388_3742803_3742912_3743060_3743191_3745606
transcript_174101.known	chr6	-	2568	15	FSM	ENSG00000079819.19	ENST00000525271.5	2568	15	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	105.954456908502	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTAGATAGTGGCTTTCC	-131057485	True	NA	NA	False	NA	NA	NA	131063251	130840181	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_130840599_130858130_130858244_130863637_130863719_130885095_130885269_130890293_130890467_130894343_130894442_130894966_130895120_130899490_130899579_130900961_130901181_130904464_130904541_130908820_130908864_130926604_130926710_130955104_130955318_130955993_130956500_131063141
transcript_174107.known	chr6	-	4186	18	FSM	ENSG00000079819.19	ENST00000527411.5	4186	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	97.9484364028933	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAACTTGTCACTTCTCT	-131057492	True	NA	-9	True	AATAAA	-13	NA	131063258	130839352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_130840595_130858130_130858244_130863637_130863719_130865535_130865635_130867458_130867582_130869562_130870127_130885095_130885269_130890293_130890467_130894343_130894442_130894966_130895120_130899490_130899579_130900961_130901181_130904464_130904541_130908820_130908864_130926604_130926710_130955104_130955318_130955993_130956500_131063141
transcript_174108.known	chr6	+	2281	8	FSM	ENSG00000118507.18	ENST00000683794.1	2281	8	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	9.57462633149488	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTCCTCATTTCTT	131134861	True	NA	6	True	AATAAA	-17	NA	131135466	131283532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_131135783_131145284_131145417_131160058_131160199_131165080_131165218_131169112_131169274_131199460_131199574_131219660_131219809_131282398
transcript_17411.known	chr1	+	2909	5	FSM	ENSG00000143340.7	ENST00000341785.5	2781	5	-128	0	-128	0	multi-exon	FALSE	canonical	0	0	junction_1	0.82915619758885	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAATTGTCAGTGAAAAG	NA	False	NA	8	True	AATAAA	-22	NA	179743162	179816198	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_179743424_179807797_179807889_179812109_179812132_179813075_179813191_179813778
transcript_174111.known	chr6	+	1006	3	FSM	ENSG00000118507.18	ENST00000537868.5	1006	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	38.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATACATGTTTGGGATTTT	131199641	True	NA	NA	False	NA	NA	NA	131199990	131283184	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_131200063_131219660_131219809_131282398
transcript_174113.known	chr6	+	2461	2	FSM	ENSG00000118507.18	ENST00000342266.4	2461	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTCCTCATTTCTT	NA	False	NA	6	True	AATAAA	-17	NA	131250158	131283532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_131250617_131281529
transcript_174116.known	chr6	-	4446	30	FSM	ENSG00000112282.18	ENST00000368060.7	4446	30	0	0	0	0	multi-exon	FALSE	canonical	2	38	junction_1	34.5737764302202	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGATTGTTTCCCGACTC	-131626576	True	NA	-21	True	AATAAA	-3	NA	131628229	131586748	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_131586938_131587708_131587847_131589464_131589597_131590321_131590443_131591312_131591528_131592387_131592461_131593005_131593172_131594098_131594336_131595946_131596164_131596517_131596689_131598286_131598468_131598555_131598762_131600037_131600163_131602217_131602382_131603029_131603205_131604177_131604321_131605239_131605486_131606478_131606625_131607927_131608072_131610045_131610247_131615906_131616003_131618406_131618520_131619826_131619897_131620627_131620730_131621880_131621980_131623350_131623463_131624864_131624990_131627395_131627484_131627640_131627673_131628010
transcript_174117.known	chr6	-	5247	29	FSM	ENSG00000112282.18	ENST00000368068.8	5247	29	0	0	0	0	multi-exon	TRUE	canonical	2	84	junction_21	31.9542681828585	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATTGGAATGAGTGTCG	-131626589	False	NA	-4	True	AATAAA	-20	NA	131628242	131586731	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_131587847_131589464_131589597_131590321_131590443_131591312_131591528_131592387_131592461_131593005_131593172_131594098_131594336_131595946_131596164_131596517_131596689_131598286_131598468_131598555_131598762_131600037_131600163_131602217_131602382_131603029_131603205_131604177_131604321_131605239_131605486_131606478_131606625_131607927_131608072_131610045_131610247_131615906_131616003_131618406_131618520_131619826_131619897_131620627_131620730_131621880_131621980_131623350_131623463_131624864_131624990_131627395_131627484_131627640_131627673_131628010
transcript_174123.nic	chr6	-	1919	9	ISM	ENSG00000112282.18	ENST00000539158.1	1636	15	-182	15162	0	9500	5prime_fragment	FALSE	canonical	3	84	junction_1	9.97496867163	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGCCGTAACTGTTTC	-131626589	False	NA	NA	False	AAAAAG	-4	NA	131628242	131617460	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_131618520_131619826_131619897_131620627_131620730_131621880_131621980_131623350_131623463_131624864_131624990_131627395_131627484_131627640_131627673_131628010
transcript_174125.known	chr6	+	3418	26	FSM	ENSG00000154269.15	ENST00000414305.5	3418	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.4	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCTGTTAATTTCACCTGT	NA	False	NA	NA	False	ATTAAA	-23	NA	131628460	131747418	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_131628639_131637234_131637463_131641454_131641531_131650026_131650150_131652541_131652668_131652830_131652892_131658322_131658421_131671247_131671328_131674161_131674282_131675079_131675190_131676735_131676802_131677867_131677941_131683053_131683163_131685363_131685496_131685875_131685908_131693496_131693625_131718671_131718739_131720291_131720380_131722226_131722406_131724039_131724092_131726045_131726201_131733587_131733724_131737354_131737433_131738030_131738164_131740223_131740381_131746785
transcript_174126.known	chr6	+	7438	25	FSM	ENSG00000197594.14	ENST00000647893.1	7438	25	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_12	15.3893902846517	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCTGCTTTCCTTTGT	131805704	True	NA	14	True	AATAAA	-15	NA	131808019	131895155	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_131808276_131847775_131847849_131849989_131850107_131851141_131851268_131852174_131852236_131854925_131855024_131858667_131858748_131860386_131860507_131861594_131861705_131864505_131864572_131864865_131864939_131868017_131868127_131869357_131869490_131872069_131872102_131872922_131873051_131874267_131874338_131875775_131875864_131876991_131877162_131878541_131878594_131879879_131880035_131882344_131882475_131883693_131883775_131884930_131885064_131886561_131886725_131890340
transcript_174130.known	chr6	+	3107	25	FSM	ENSG00000197594.14	ENST00000513998.5	3107	25	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_10	31.4960039352437	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGGCATTGGGCAAACAG	131805718	True	NA	-12	True	AATAAA	-4	NA	131808033	131890864	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_131808276_131847775_131847849_131849989_131850107_131851141_131851268_131852174_131852236_131854925_131855024_131858667_131858748_131860386_131860507_131861594_131861705_131864505_131864572_131864891_131864939_131868017_131868127_131869357_131869490_131872069_131872102_131872922_131873051_131874267_131874338_131875775_131875864_131876991_131877162_131878541_131878594_131879879_131880035_131882344_131882475_131883693_131883775_131884930_131885064_131886561_131886725_131890340
transcript_174153.nnic	chr6	+	1776	4	Fusion	ENSG00000280058.1_ENSG00000236673.5	novel	601	3	NA	NA	-66	-1054	multi-exon	FALSE	canonical	3	76	junction_2	139.795882946848	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAGAGAAAACTATTTTAAA	131901719	False	NA	25	True	ATTAAA	-25	NA	131901896	131919511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr6_+_131902152_131903946_131904235_131910784_131910956_131918449
transcript_174155.nnic	chr6	+	2266	4	Fusion	ENSG00000280058.1_ENSG00000236673.5	novel	601	3	NA	NA	-66	-564	multi-exon	FALSE	canonical	3	76	junction_2	139.795882946848	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAATTGAAACAAAAGCAAA	131901719	False	NA	11	True	NA	NA	NA	131901896	131920001	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr6_+_131902152_131903946_131904235_131910784_131910956_131918449
transcript_17418.known	chr1	-	7905	6	FSM	ENSG00000169905.13	ENST00000367612.7	7905	6	0	0	0	0	multi-exon	TRUE	canonical	3	6	junction_4	21.4625254804741	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGACTGATTCTTGATTAA	-179871487	True	NA	-4	True	AATAAA	-23	NA	179877799	179839966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_179846829_179847534_179847637_179850844_179851364_179852631_179852812_179877238_179877374_179877692
transcript_17419.known	chr1	-	7067	3	FSM	ENSG00000169905.13	ENST00000482587.5	7067	3	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	7.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAACTGTCATACATTTG	-179871487	True	NA	-11	True	AATAAA	-37	NA	179877799	179859029	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_179865855_179877238_179877374_179877692
transcript_174190.nnic	chr6	+	1007	3	NNC	ENSG00000236673.5	novel	601	3	NA	NA	-107	-149	at_least_one_novel_splicesite	FALSE	canonical	3	114	junction_2	140	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	131901649	False	NA	10	True	ATTAAA	-21	NA	131901855	131907381	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_131902152_131903946_131904235_131906958
transcript_174194.nnic	chr6	+	2290	3	NNC	ENSG00000236673.5	novel	601	3	NA	NA	-114	-542	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	189	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAAAGTGGGTTCTAAAT	131901642	True	NA	33	True	NA	NA	NA	131901848	131920023	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_131902152_131903946_131904235_131918324
transcript_174196.nnic	chr6	+	1891	3	NIC	ENSG00000236673.5	novel	601	3	NA	NA	-352	-1054	combination_of_known_splicesites	FALSE	canonical	3	172	junction_2	111	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAGAGAAAACTATTTTAAA	131901597	False	NA	25	True	ATTAAA	-25	NA	131901610	131919511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_131902152_131903946_131904235_131918449
transcript_174197.nnic	chr6	+	1686	3	NIC	ENSG00000236673.5	novel	601	3	NA	NA	-66	-973	combination_of_known_splicesites	FALSE	canonical	3	172	junction_2	111	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGAAGCATCATGCTACC	131901719	False	NA	106	True	AAAAAG	-41	NA	131901896	131919592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_131902152_131903946_131904235_131918449
transcript_174198.nnic	chr6	+	2012	3	NIC	ENSG00000236673.5	novel	601	3	NA	NA	-108	-689	combination_of_known_splicesites	FALSE	canonical	3	172	junction_2	111	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAACTCAAAATGGATGAAA	131901648	False	NA	NA	False	ATTAAA	-33	NA	131901854	131919876	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_131902152_131903946_131904235_131918449
transcript_174199.nnic	chr6	+	2214	3	NIC	ENSG00000236673.5	novel	601	3	NA	NA	-185	-564	combination_of_known_splicesites	FALSE	canonical	3	172	junction_2	111	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAATTGAAACAAAAGCAAA	131901767	False	NA	11	True	NA	NA	NA	131901777	131920001	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_131902152_131903946_131904235_131918449
transcript_17420.known	chr1	-	888	2	FSM	ENSG00000169905.13	ENST00000495650.1	888	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTTAGACCGTATTAAC	-179871478	True	NA	NA	False	AATGAA	-11	NA	179877790	179865064	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_179865855_179877692
transcript_174200.nnic	chr6	+	2169	3	NIC	ENSG00000236673.5	novel	601	3	NA	NA	-66	-490	combination_of_known_splicesites	FALSE	canonical	3	172	junction_2	111	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAACAGAGTGAACAGAC	131901719	False	NA	85	True	AATAAA	-30	NA	131901896	131920075	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_131902152_131903946_131904235_131918449
transcript_174201.nnic	chr6	+	2656	3	NIC	ENSG00000236673.5	novel	601	3	NA	NA	-66	-3	combination_of_known_splicesites	FALSE	canonical	3	172	junction_2	111	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCTGCACTTGTATGTT	131901719	False	NA	116	True	AATAAA	-16	NA	131901896	131920562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_131902152_131903946_131904235_131918449
transcript_174208.nnic	chr6	+	1978	3	NNC	ENSG00000236673.5	novel	2305	2	NA	NA	-66	-564	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_1	37.5	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAATTGAAACAAAAGCAAA	131901719	False	NA	11	True	NA	NA	NA	131901896	131920001	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_131902152_131910784_131910956_131918449
transcript_174217.nnic	chr6	+	1950	3	NNC	ENSG00000236673.5	novel	601	3	NA	NA	-107	-564	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	73.5	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAATTGAAACAAAAGCAAA	131901649	False	NA	11	True	NA	NA	NA	131901855	131920001	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_131902152_131904132_131904235_131918449
transcript_174240.known	chr6	+	2305	2	FSM	ENSG00000236673.5	ENST00000454596.1	2305	2	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCACTTGTATGTTCAT	131901785	False	NA	119	True	AATAAA	-19	NA	131901962	131920565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_131902152_131918449
transcript_174256.known	chr6	-	2338	5	FSM	ENSG00000118523.6	ENST00000367976.4	2338	5	0	0	0	0	multi-exon	TRUE	canonical	3	370	junction_4	44.4915722356493	2159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTGGTTATTCATTTAT	-131942244	True	NA	NA	False	AATAAA	-21	NA	131951372	131948175	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_131949561_131949948_131950161_131950291_131950544_131950769_131950993_131951106
transcript_17426.known	chr1	+	3397	10	FSM	ENSG00000143337.19	ENST00000435319.8	3397	10	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_7	15.9915100932254	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTGTTATAAACTTAATGA	179882452	True	NA	13	True	AATAAA	-26	NA	179882695	179920077	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_179882978_179884691_179884770_179889312_179889370_179900125_179900168_179901301_179901389_179903965_179904023_179907822_179907865_179908604_179908674_179913997_179914055_179917451
transcript_174269.known	chr6	-	2989	12	FSM	ENSG00000079931.15	ENST00000367963.8	2989	12	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	3.27777388678544	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTGTGGTATTTTATA	-132401065	True	NA	-17	True	AATAAA	-16	NA	132401475	132296054	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_132297318_132297786_132297956_132315634_132315778_132320628_132320689_132322678_132322871_132323930_132324098_132328012_132328116_132328414_132328595_132372607_132372692_132372829_132372998_132374630_132374778_132401162
transcript_174270.known	chr6	-	15845	10	FSM	ENSG00000079950.14	ENST00000367941.7	15845	10	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_5	15.8962686824516	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTCATTTTTACATTTT	-132508613	True	NA	NA	False	TATAAA	-23	NA	132513116	132445866	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_132460851_132463992_132464076_132468402_132468476_132469950_132470048_132470573_132470627_132471462_132471601_132472281_132472376_132475592_132475663_132503445_132503589_132513006
transcript_174277.known	chr6	-	1090	10	FSM	ENSG00000079950.14	ENST00000367937.4	1090	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	64.4187688315896	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGATTTTGAATGTAGTT	NA	False	NA	NA	False	NA	NA	NA	132513198	132461713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_132461861_132463992_132464076_132468402_132468476_132469950_132470048_132470573_132470627_132471462_132471601_132472281_132472376_132475592_132475663_132503445_132503589_132513006
transcript_174281.nic	chr6	-	2555	15	NIC	ENSG00000146409.12	novel	2421	15	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_12	88.7069527680201	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTTGGTCTATTTTCA	-132794699	True	NA	-2	True	AATAAA	-21	NA	132798659	132769369	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_132770337_132770889_132770940_132771035_132771130_132772131_132772207_132772992_132773089_132774221_132774314_132776327_132776430_132779267_132779405_132783932_132784090_132787433_132787582_132789763_132789838_132790176_132790273_132790784_132790866_132796981_132797122_132798413
transcript_174287.known	chr6	-	2452	14	FSM	ENSG00000146409.12	ENST00000275227.9	2452	14	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_5	26.6642503836262	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTTGGTCTATTTTCA	-132794677	True	NA	-2	True	AATAAA	-21	NA	132798637	132769369	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_132770337_132770889_132770940_132771035_132771130_132772131_132772207_132772992_132773089_132774221_132774314_132776327_132776430_132779267_132779405_132783932_132784090_132787433_132787582_132789763_132789838_132790176_132790273_132796981_132797122_132798413
transcript_174306.known	chr6	+	503	6	FSM	ENSG00000112306.8	ENST00000230050.4	503	6	0	0	0	0	multi-exon	FALSE	canonical	3	6209	junction_1	1227.01106759475	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCATGTCTGGCTTTTT	132736038	True	NA	14	True	AATAAA	-14	NA	132814568	132817564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_132814614_132814731_132814783_132814971_132815089_132816460_132816564_132816959_132817062_132817479
transcript_174307.known	chr6	+	639	6	FSM	ENSG00000112306.8	ENST00000484616.2	639	6	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_3	3354.58281161756	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCATGTCTGGCTTTTT	132736038	True	NA	14	True	AATAAA	-14	NA	132814568	132817564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_132814614_132814731_132814783_132814971_132815225_132816460_132816564_132816959_132817062_132817479
transcript_174309.known	chr6	+	1280	2	FSM	ENSG00000118526.7	ENST00000367882.5	1280	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGATATTTGGAGTGAT	133889072	True	NA	NA	False	AATAAA	-22	NA	133889112	133892257	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_133889848_133891712
transcript_174311.known	chr6	+	4199	7	FSM	ENSG00000028839.10	ENST00000237264.9	4199	7	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_2	56.6237582645306	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTTTCTATGCATTTT	133949186	True	NA	10	True	AATAAA	-22	NA	133953223	133990432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_133953426_133980081_133980261_133982567_133982651_133982816_133982881_133984375_133984480_133984576_133984672_133986960
transcript_174313.known	chr6	+	808	6	FSM	ENSG00000028839.10	ENST00000367871.5	808	6	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_2	60.0779493658031	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGCTCATACCAAGATAGA	133949157	True	NA	NA	False	NA	NA	NA	133953194	133984723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_133953426_133980081_133980261_133982567_133982651_133982816_133982881_133984375_133984480_133984576
transcript_174314.known	chr6	-	5572	5	FSM	ENSG00000146411.6	ENST00000275230.6	5572	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	2.1650635094611	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTTGCATAGATTTTAAA	-134052426	True	NA	NA	False	AATACA	-38	NA	134052624	133987580	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_133991309_134001996_134002130_134006811_134006935_134028380_134029722_134052377
transcript_174316.known	chr6	-	2401	12	FSM	ENSG00000118515.12	ENST00000237305.11	2401	12	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_8	10.5525054797819	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATATTGTGTCATGTGTT	-134174818	False	NA	-4	True	AATAAA	-18	NA	134174896	134169251	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_134170436_134170825_134170916_134171022_134171179_134171636_134171733_134172192_134172317_134172661_134172775_134173022_134173155_134173273_134173358_134173461_134173567_134174004_134174081_134174510_134174587_134174731
transcript_174317.known	chr6	-	2686	12	FSM	ENSG00000118515.12	ENST00000413996.7	2686	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_11	17.7317010785907	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTGTGTCATGTGTTAT	NA	False	NA	-2	True	AATAAA	-20	NA	134175991	134169249	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_134170436_134170825_134170916_134171022_134171179_134171636_134171733_134172192_134172317_134172661_134172775_134173022_134173155_134173273_134173358_134173461_134173567_134174004_134174081_134174510_134174587_134175543
transcript_174329.known	chr6	-	573	5	FSM	ENSG00000118515.12	ENST00000532856.5	573	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	5.11737237261468	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCGTCATTTTCCTAGGAG	-134174303	True	NA	NA	False	ACTAAA	-5	NA	134174861	134173171	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_134173358_134173461_134173567_134174004_134174081_134174510_134174587_134174731
transcript_174331.known	chr6	-	7087	18	FSM	ENSG00000112339.15	ENST00000367837.10	7087	18	0	0	0	0	multi-exon	FALSE	canonical	3	676	junction_7	53.1567506381673	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATATGTAAAAAGAGAATAT	-135045548	True	NA	NA	False	NA	NA	NA	135054822	134960377	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_134965291_134966328_134966474_134969237_134969339_134978678_134978788_134979177_134979269_134982457_134982563_134985340_134985410_134986065_134986184_134986735_134986811_134987644_134987792_134993757_134993876_134996776_134996943_134997396_134997657_135002733_135002843_135039572_135039768_135042000_135042127_135050581_135050648_135054648
transcript_174338.known	chr6	-	2703	17	FSM	ENSG00000112339.15	ENST00000367826.6	2703	17	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_15	166.718700210864	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACAAACTGTGTTTTGTT	-135045545	True	NA	-23	True	AATAAA	-19	NA	135054819	134964632	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_134965291_134966328_134966474_134969237_134969339_134978678_134978788_134979177_134979269_134982457_134982563_134985340_134985410_134986065_134986184_134986735_134986811_134987644_134987792_134993757_134993876_134996776_134996943_134997396_134997657_135002733_135002843_135039572_135039768_135050581_135050648_135054648
transcript_174339.known	chr6	-	2636	17	FSM	ENSG00000112339.15	ENST00000415177.6	2636	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	192.582612143464	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAACTGTGTTTTGTTCT	-135045545	True	NA	-21	True	AATAAA	-21	NA	135054819	134964630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_134965291_134966328_134966474_134969237_134969339_134978678_134978788_134979177_134979269_134982457_134982563_134985340_134985410_134986065_134986184_134986735_134986811_134987644_134987792_134993757_134993876_134996776_134996943_134997396_134997657_135002733_135002843_135042000_135042127_135050581_135050648_135054648
transcript_17435.known	chr1	-	989	1	FSM	ENSG00000272906.1	ENST00000610272.1	989	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGATCCATTATTTTTA	-179882403	False	NA	NA	False	ATTAAA	-20	NA	179882595	179881606	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_179881600_179882600
transcript_174353.known	chr6	-	2793	5	FSM	ENSG00000112339.15	ENST00000367822.9	2793	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	338.35890707945	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTGCATGTTCTTTGA	-135045610	True	NA	0	True	AATAAA	-22	NA	135054884	135035856	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_135038027_135039572_135039768_135042000_135042127_135050581_135050648_135054648
transcript_174360.known	chr6	+	2277	16	FSM	ENSG00000118513.20	ENST00000528774.5	2277	16	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_8	6.01331855134916	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATTTCCAGAAAAGCATT	135181133	False	NA	NA	False	NA	NA	NA	135181513	135217980	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_135181537_135185902_135186021_135187833_135187906_135189790_135189884_135190126_135190348_135192323_135192559_135193837_135193919_135194355_135194452_135195747_135196003_135196960_135197324_135198907_135199051_135200084_135200200_135200289_135200416_135201638_135201750_135203216_135203325_135217863
transcript_174361.known	chr6	+	3302	15	FSM	ENSG00000118513.20	ENST00000367814.8	3302	15	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	3.71497246398453	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTCTCTCTTATTT	135180947	True	NA	12	True	AATAAA	-23	NA	135181327	135219173	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_135181537_135185902_135186021_135187833_135187906_135189790_135189884_135190126_135190348_135192323_135192559_135193837_135193919_135194355_135194461_135195747_135196003_135198907_135199051_135200084_135200200_135200289_135200416_135201638_135201750_135203216_135203325_135217863
transcript_174366.known	chr6	-	5549	28	FSM	ENSG00000135541.22	ENST00000457866.6	5549	28	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	18.50110292193	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCAGCTAATAATTTTGA	-135495817	True	NA	NA	False	AATAAA	-19	NA	135497765	135283985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_135285648_135290422_135290526_135300499_135300559_135318518_135318617_135323161_135323325_135358131_135358188_135394775_135394897_135404950_135404978_135411347_135411545_135427166_135427308_135428628_135428760_135429881_135430001_135431207_135431315_135433026_135433257_135438374_135438499_135442581_135442715_135447007_135447161_135448289_135448476_135453340_135453437_135455733_135455927_135457493_135457714_135463124_135463307_135465813_135466374_135467580_135467635_135490622_135490748_135492227_135492292_135497187_135497250_135497582
transcript_174374.nic	chr6	-	1207	5	ISM	ENSG00000135541.22	ENST00000681477.1	3540	20	-294	71525	-238	-2710	5prime_fragment	FALSE	canonical	3	35	junction_4	21.3248681121361	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGTTCCAGTCTTCTCTA	-135497986	False	NA	NA	False	AAAAAG	-13	NA	135498019	135465846	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_135466374_135467580_135467635_135490622_135490748_135492227_135492292_135497582
transcript_174378.known	chr6	-	5303	29	FSM	ENSG00000135541.22	ENST00000681340.1	5303	29	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_27	21.4816010500491	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGAAAGACCTATCCAAAT	-135495833	True	NA	NA	False	TATAAA	-2	NA	135497781	135284418	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_135285648_135290422_135290526_135300499_135300559_135318518_135318617_135323161_135323325_135358131_135358188_135394775_135394897_135404950_135404978_135411347_135411545_135427166_135427308_135428628_135428760_135429881_135430001_135431207_135431315_135433026_135433257_135438374_135438499_135442581_135442715_135447007_135447161_135448289_135448476_135453340_135453437_135455733_135455927_135457493_135457714_135463124_135463307_135465813_135466374_135467580_135467635_135490622_135490748_135492227_135492292_135495538_135495710_135497187_135497250_135497582
transcript_174380.known	chr6	-	5397	30	FSM	ENSG00000135541.22	ENST00000679589.1	5397	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_24	22.6178509572921	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGAAAGACCTATCCAAAT	-135495817	True	NA	NA	False	TATAAA	-2	NA	135497765	135284418	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_135285648_135290422_135290526_135300499_135300559_135318518_135318617_135323161_135323325_135358131_135358188_135394775_135394897_135404950_135404978_135411347_135411545_135427166_135427308_135428628_135428760_135429881_135430001_135431207_135431315_135433026_135433257_135438374_135438499_135442581_135442715_135447007_135447161_135448289_135448476_135453340_135453437_135455733_135455927_135457493_135457714_135463124_135463307_135465813_135466374_135467580_135467635_135467750_135467947_135490622_135490748_135492227_135492292_135495813_135495899_135497187_135497250_135497582
transcript_174383.nic	chr6	-	355	3	ISM	ENSG00000135541.22	ENST00000524469.5	1074	5	-38	27513	0	-172	5prime_fragment	FALSE	canonical	3	35	junction_2	29	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTCAGGTCTGAAGAAAA	-135495827	True	NA	NA	False	AAGAAA	-16	NA	135497775	135490649	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_135490748_135492227_135492292_135497582
transcript_174386.known	chr6	-	1789	8	FSM	ENSG00000146410.12	ENST00000420702.6	1789	8	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_7	20.6930926067771	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTGTGTTTTGTAGCA	-136249333	True	NA	-6	True	AATAAA	-14	NA	136250311	136231033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_136231389_136233324_136233500_136239465_136239821_136241443_136241677_136242860_136242974_136244764_136244870_136249036_136249154_136249975
transcript_174387.known	chr6	-	1524	8	FSM	ENSG00000146410.12	ENST00000451457.6	1524	8	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_7	26.1627558930317	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGTAGCAACCAAAATTC	-136249346	True	NA	4	True	AATAAA	-24	NA	136250324	136231023	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_136231389_136233324_136233500_136239465_136239821_136241443_136241677_136242860_136242974_136244764_136244870_136249036_136249154_136250263
transcript_174390.known	chr6	-	5640	14	FSM	ENSG00000029363.17	ENST00000527613.5	5640	14	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	258.214923553156	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATAACTGCTGTTGTTTG	-136274116	True	NA	-23	True	AATAAA	-10	NA	136289795	136258592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_136261116_136261264_136261478_136267028_136267176_136268161_136268340_136269140_136269304_136269436_136269613_136271994_136272080_136273081_136273188_136275531_136275702_136275842_136276509_136277864_136278777_136279762_136279877_136282583_136282688_136289712
transcript_174396.known	chr6	-	4373	13	FSM	ENSG00000029363.17	ENST00000527759.5	4373	13	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_10	193.004371712145	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGCACCTAGATTACAGCC	-136274116	True	NA	NA	False	NA	NA	NA	136289795	136259690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_136261116_136261264_136261478_136267028_136267176_136268161_136268340_136269436_136269613_136271994_136272080_136273081_136273188_136275531_136275702_136275842_136276509_136277864_136278771_136279762_136279877_136282583_136282688_136289712
transcript_174397.known	chr6	-	4186	13	FSM	ENSG00000029363.17	ENST00000530767.5	4186	13	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_9	194.528204181867	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTGCATGACTATGTG	-136274102	True	NA	0	True	AATAAA	-32	NA	136289781	136259350	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_136261116_136261264_136261478_136267028_136267176_136268161_136268340_136269436_136269613_136271994_136272080_136273081_136273188_136275531_136275702_136275842_136275990_136277864_136278777_136279762_136279877_136282583_136282688_136289712
transcript_1744.known	chr1	-	446	2	FSM	ENSG00000116213.16	ENST00000479331.1	446	2	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGGAAACTCCAACGTAG	-3646681	True	NA	NA	False	TTTAAA	-1	NA	3650061	3647245	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3647561_3649930
transcript_174405.known	chr6	-	5371	12	FSM	ENSG00000029363.17	ENST00000527536.5	5371	12	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_2	174.904885604332	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTGTTTGTTTACCT	-136274150	True	NA	-16	True	AATAAA	-17	NA	136289829	136258585	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_136261116_136261264_136261478_136268161_136268340_136269436_136269613_136271994_136272080_136273081_136273188_136275531_136275702_136275842_136276509_136277864_136278777_136279762_136279877_136282583_136282688_136289712
transcript_174410.known	chr6	-	7494	13	FSM	ENSG00000029363.17	ENST00000531224.6	7494	13	0	0	0	0	multi-exon	FALSE	canonical	3	597	junction_2	65.8876885313182	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCACTGCAACCTCCGCC	-136274167	True	NA	NA	False	NA	NA	NA	136289846	136256626	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_136261116_136261264_136261478_136267028_136267176_136268161_136268340_136269436_136269613_136271994_136272080_136273081_136273188_136275531_136275702_136275842_136276509_136277864_136278777_136279762_136279877_136282583_136282688_136289712
transcript_174412.known	chr6	-	7110	12	FSM	ENSG00000029363.17	ENST00000353331.8	7110	12	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_9	247.831420976317	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAATAGTGGATTATTTGC	-136274172	True	NA	-6	True	AATAAA	-22	NA	136289851	136256862	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_136261116_136261264_136261478_136268161_136268340_136269436_136269613_136271994_136272080_136273081_136273188_136275531_136275702_136275842_136276509_136277864_136278771_136279762_136279877_136282583_136282688_136289712
transcript_174420.known	chr6	-	2512	10	FSM	ENSG00000029363.17	ENST00000628517.2	2512	10	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	227.846331147298	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGACAAAAACTTTGGAATAG	-136274172	True	NA	NA	False	NA	NA	NA	136289851	136269263	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_136269304_136269436_136269613_136271994_136272080_136273081_136273188_136275531_136275702_136275842_136276509_136277864_136278777_136279762_136279877_136282583_136282688_136289712
transcript_174422.known	chr6	-	7719	15	FSM	ENSG00000029363.17	ENST00000640069.1	7719	15	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	326.335466559634	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCACTGCAACCTCCGCC	-136274168	True	NA	NA	False	NA	NA	NA	136289847	136256626	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_136261116_136261264_136261478_136267028_136267176_136268161_136268340_136269140_136269304_136269436_136269613_136270322_136270384_136271994_136272080_136273081_136273188_136275531_136275702_136275842_136276509_136277864_136278777_136279762_136279877_136282583_136282688_136289712
transcript_174425.known	chr6	-	2423	9	FSM	ENSG00000029363.17	ENST00000529826.5	2423	9	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_2	244.439377709484	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGATTACAAGGAATACA	-136274165	True	NA	0	True	AAGAAA	-16	NA	136289844	136269475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_136269613_136271994_136272077_136273081_136273188_136275531_136275702_136275842_136276509_136277864_136278777_136279762_136279877_136282583_136282688_136289712
transcript_174433.nic	chr6	-	2291	8	ISM	ENSG00000029363.17	ENST00000628517.2	2512	10	4	2732	0	-77	5prime_fragment	FALSE	canonical	3	616	junction_4	58.6629946284326	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGTTTTTGAATGTAAT	-136274168	True	NA	NA	False	AAGAAA	-8	NA	136289847	136271995	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_136272080_136273081_136273188_136275531_136275702_136275842_136276509_136277864_136278777_136279762_136279877_136282583_136282688_136289712
transcript_174438.nic	chr6	-	1700	5	ISM	ENSG00000029363.17	ENST00000529826.5	2423	9	-3	6598	0	-519	5prime_fragment	FALSE	canonical	3	616	junction_1	71.2894627557257	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCTGAAAGAATAACAGTAA	-136274168	True	NA	-9	True	NA	NA	NA	136289847	136276073	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_136276509_136277864_136278777_136279762_136279877_136282583_136282688_136289712
transcript_174439.nic	chr6	-	1622	5	ISM	ENSG00000029363.17	ENST00000529826.5	2423	9	-3	6676	0	-597	5prime_fragment	FALSE	canonical	3	616	junction_1	71.2894627557257	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATAAACTTAAAGAGACTG	-136274168	True	NA	-87	True	AATAGA	-30	NA	136289847	136276151	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_136276509_136277864_136278777_136279762_136279877_136282583_136282688_136289712
transcript_174445.nic	chr6	-	753	4	ISM	ENSG00000029363.17	ENST00000529826.5	2423	9	-3	8901	0	1106	5prime_fragment	FALSE	canonical	3	730	junction_2	28.6627904356075	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGAAGGGGAACCCCAAGA	-136274168	True	NA	NA	False	AAAACA	-11	NA	136289847	136278376	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_136278777_136279762_136279877_136282583_136282688_136289712
transcript_174449.known	chr6	-	3758	18	FSM	ENSG00000135525.19	ENST00000354570.8	3758	18	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_12	63.8090251884616	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTAGCTTTCTCATATGT	-136540034	True	NA	-29	True	AATAAA	-19	NA	136550422	136342733	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_136344239_136345855_136346080_136356691_136356795_136359819_136359878_136359980_136360032_136360696_136360799_136361004_136361180_136362449_136362703_136365734_136366019_136366326_136366440_136372500_136372626_136377754_136377869_136383670_136383782_136388392_136388511_136389353_136389518_136411619_136411698_136421700_136421800_136550341
transcript_174460.known	chr6	-	4497	17	FSM	ENSG00000135525.19	ENST00000618822.4	4497	17	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_12	138.617222504998	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTTTCCTTCCTACACC	NA	False	NA	NA	False	NA	NA	NA	136550819	136342280	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_136344239_136345855_136346080_136356691_136356795_136359819_136359878_136359980_136360032_136360696_136360799_136361004_136361180_136362449_136362703_136365734_136366019_136366326_136366440_136372500_136372626_136377754_136377869_136388392_136388511_136389353_136389518_136411619_136411698_136421700_136421800_136550341
transcript_174478.nic	chr6	-	904	8	ISM	ENSG00000135525.19	ENST00000354570.8	3758	18	-14	29767	-14	-28661	5prime_fragment	FALSE	canonical	3	414	junction_2	65.3724025901463	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAGCTGTTGGGAGCA	-136540048	True	NA	NA	False	NA	NA	NA	136550436	136372500	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_136372626_136377754_136377869_136383670_136383782_136388392_136388511_136389353_136389518_136411619_136411698_136421700_136421800_136550341
transcript_174486.known	chr6	+	1454	10	FSM	ENSG00000112357.14	ENST00000318471.5	1454	10	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_6	16.8852335225519	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTTCCCCCAAAAGACTG	136821179	True	NA	31	True	AATAAA	-27	NA	136822591	136913934	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_136822796_136825213_136825272_136826318_136826470_136845614_136845693_136846072_136846182_136866626_136866734_136869889_136870004_136872197_136872254_136898141_136898242_136913457
transcript_174488.known	chr6	+	1707	10	FSM	ENSG00000112357.14	ENST00000678557.1	1707	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	30.6984537351378	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTATTGATCATTTATCA	136821485	False	NA	6	True	AATAAA	-2	NA	136822897	136913909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_136823380_136825213_136825272_136826318_136826470_136845614_136845693_136846072_136846182_136866626_136866734_136869889_136870004_136872197_136872254_136898141_136898242_136913457
transcript_17449.known	chr1	+	2519	13	FSM	ENSG00000116260.17	ENST00000367600.5	2519	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	164.450853854072	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGGTGTGTTCTTTAAC	180146212	True	NA	35	True	AATAAA	-19	NA	180154896	180198034	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_180155173_180166490_180166592_180175320_180175367_180175930_180176034_180178793_180178885_180182173_180182320_180183915_180184051_180186052_180186183_180189551_180189675_180190432_180190581_180194212_180194393_180196261_180196600_180197332
transcript_174496.known	chr6	+	2343	2	FSM	ENSG00000182747.5	ENST00000331858.5	2343	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAGACACATGTTCTATT	136922266	False	NA	NA	False	AATAAA	-42	NA	136922300	136925660	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_136922868_136923884
transcript_174497.known	chr6	-	3486	7	FSM	ENSG00000016402.14	ENST00000316649.10	3486	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	2.92498812913071	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGCTTATTAATTCCAT	NA	False	NA	NA	False	AATAAA	-42	NA	137044965	136999970	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_137002356_137004620_137004761_137008598_137008744_137009316_137009493_137011273_137011453_137016967_137017104_137044640
transcript_1745.known	chr1	+	506	4	FSM	ENSG00000235169.11	ENST00000642557.4	506	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	10.9848380355227	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTGAGAGCACAGGCCTG	3772020	True	NA	26	True	AATAAA	-35	NA	3772748	3775956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_3772789_3773062_3773182_3775298_3775484_3775794
transcript_174500.nic	chr6	-	2221	8	NIC	ENSG00000027697.15	novel	2183	8	NA	NA	28	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_7	107.236530479999	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTGTATTCATTTATTC	-137215743	True	NA	-3	True	AATAAA	-15	NA	137219421	137197484	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_137198640_137200880_137201009_137203498_137203686_137204331_137204505_137206135_137206309_137206962_137207078_137215266_137215378_137219242
transcript_174504.known	chr6	-	2492	7	FSM	ENSG00000027697.15	ENST00000644894.1	2492	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	92.7674811318899	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAAAACTCGTTTTTGT	-137215566	False	NA	-15	True	AATAAA	-3	NA	137219244	137197496	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_137198640_137200880_137201009_137203498_137203686_137204331_137204505_137206135_137206309_137206962_137207078_137218671
transcript_174505.known	chr6	-	2074	7	FSM	ENSG00000027697.15	ENST00000367739.9	2074	7	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_4	25.0161059230959	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTGTATTCATTTATTC	-137215707	True	NA	-3	True	AATAAA	-15	NA	137219385	137197484	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_137198640_137200880_137201009_137203498_137203686_137204331_137204505_137206135_137206309_137206962_137207078_137219242
transcript_174508.known	chr6	-	2519	8	FSM	ENSG00000027697.15	ENST00000646898.1	2519	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	108.150688525647	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAAAACTCGTTTTTGT	-137215482	False	NA	-15	True	AATAAA	-3	NA	137219160	137197496	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_137198640_137200880_137201009_137203498_137203686_137204331_137204505_137206135_137206309_137206962_137207078_137215266_137215378_137218671
transcript_174509.known	chr6	-	2136	8	FSM	ENSG00000027697.15	ENST00000643119.1	2136	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	109.439387753389	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTGTATTCATTTATTC	-137215634	False	NA	-3	True	AATAAA	-15	NA	137219312	137197484	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_137198640_137200880_137201009_137203498_137203686_137204331_137204505_137206135_137206309_137206962_137207078_137209849_137209985_137219242
transcript_17451.nic	chr1	+	2889	13	NIC	ENSG00000116260.17	novel	2519	13	NA	NA	-69	0	combination_of_known_junctions	TRUE	canonical	3	61	junction_12	148.241614902459	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTTGTTAAGGCAAGC	180146115	True	NA	17	True	AATAAA	-1	NA	180154799	180198016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_180155173_180166490_180166592_180175320_180175367_180175930_180176034_180178793_180178885_180182173_180182320_180183915_180184051_180186052_180186183_180189551_180189675_180190432_180190581_180194212_180194393_180196261_180196891_180197332
transcript_174510.known	chr6	-	2196	1	FSM	ENSG00000177468.7	ENST00000367734.4	2196	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGCCTTTGCCTAAAAT	-137494207	True	NA	NA	False	AATAAA	-20	NA	137494394	137492198	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_137492200_137494400
transcript_174513.known	chr6	+	4665	9	FSM	ENSG00000118503.16	ENST00000612899.5	4665	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1.65359456941537	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTGATGTTTTCAATTG	137867045	True	NA	17	True	AATAAA	-14	NA	137867258	137883312	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_137867543_137871212_137871523_137874844_137875036_137875687_137875836_137875995_137876167_137877075_137877257_137878431_137879352_137880070_137880253_137881034
transcript_174514.known	chr6	-	4198	3	FSM	ENSG00000112378.12	ENST00000421351.4	4198	3	0	0	0	0	multi-exon	FALSE	canonical	3	719	junction_1	0	424	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTGTGAGCATGCGTG	-138097138	True	NA	NA	False	AATAAA	-15	NA	138107419	138088504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_138092269_138096353_138096495_138107126
transcript_174517.nic	chr6	+	1284	10	ISM	ENSG00000112379.9	ENST00000251691.5	14859	34	-43	88905	-43	-88905	5prime_fragment	FALSE	canonical	3	27	junction_8	6.72933507987854	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGAAAGAGGTGAGGAGG	138160057	True	NA	NA	False	NA	NA	NA	138161895	138255758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_138162172_138170661_138170714_138207041_138207124_138209909_138210042_138229783_138229853_138238508_138238632_138242951_138242995_138245512_138245592_138253879_138253985_138255435
transcript_174524.known	chr6	+	14859	34	FSM	ENSG00000112379.9	ENST00000251691.5	14859	34	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_18	7.09569897792371	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGTTTACAGAATTCT	138160100	True	NA	6	True	AATAAA	-13	NA	138161938	138344663	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_138162172_138170661_138170714_138207041_138207124_138209909_138210042_138229783_138229853_138238508_138238632_138242951_138242995_138245512_138245592_138253879_138253985_138255435_138255770_138261526_138261640_138262700_138263612_138278450_138278618_138279998_138280165_138285945_138286054_138286700_138286917_138287073_138287185_138289817_138289969_138291732_138292054_138293992_138294127_138296809_138296956_138298605_138298786_138307252_138307398_138308738_138308862_138311406_138311511_138313794_138313940_138317250_138317380_138319702_138319880_138321110_138321226_138323670_138323774_138324022_138324155_138328020_138328143_138333969_138335189_138336294
transcript_174526.known	chr6	+	844	4	FSM	ENSG00000051620.11	ENST00000367697.7	844	4	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	498.833528232505	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGAGAGTACTACTATTA	138404165	False	NA	34	True	AGTAAA	-20	NA	138404246	138413173	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_138404598_138405144_138405281_138405970_138406034_138412879
transcript_174527.known	chr6	+	10010	4	FSM	ENSG00000051620.11	ENST00000607197.6	10010	4	0	0	0	0	multi-exon	TRUE	canonical	3	951	junction_3	84.0092587489948	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTCTAGTCTTTTTTAG	138404141	True	NA	NA	False	ATTAAA	-18	NA	138404222	138422197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_138404598_138405144_138405281_138405970_138406152_138412879
transcript_174531.nic	chr6	+	519	2	ISM	ENSG00000051620.11	ENST00000367697.7	844	4	-40	7901	-16	-7882	5prime_fragment	FALSE	canonical	3	1069	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGAGAAAGGTAAAAGCAGTT	NA	False	NA	9	True	NA	NA	NA	138404206	138405272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_138404598_138405144
transcript_174535.known	chr6	+	917	3	FSM	ENSG00000225177.6	ENST00000432673.1	917	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGCAGTCACTTGAGTC	138692046	True	NA	37	True	AATAAA	-19	NA	138692547	138697288	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_138692618_138694392_138694548_138696596
transcript_174538.known	chr6	+	703	3	FSM	ENSG00000225177.6	ENST00000458733.5	703	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGCAGTCACTTGAGTC	138693888	False	NA	37	True	AATAAA	-19	NA	138694389	138697288	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_138694548_138696596_138696756_138696902
transcript_174539.known	chr6	+	421	3	FSM	ENSG00000225177.6	ENST00000428044.5	421	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	11.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTGGAAGATAGCACAGT	138693817	False	NA	NA	False	NA	NA	NA	138694318	138697027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_138694548_138696596_138696756_138696994
transcript_174543.known	chr6	+	1247	6	FSM	ENSG00000024862.18	ENST00000617445.5	1247	6	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_2	15.5306149266537	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTGTCTGTTTTGAA	138772394	True	NA	9	True	AATAAA	-19	NA	138773768	138793319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_138773903_138776078_138776279_138779821_138779986_138785226_138785382_138788365_138788389_138792748
transcript_17455.known	chr1	+	9276	12	FSM	ENSG00000116260.17	ENST00000367602.8	9276	12	0	0	0	0	multi-exon	FALSE	canonical	3	483	junction_6	44.8497952306519	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGATGCAATTTTTTTT	180146184	True	NA	NA	False	AATAAA	-43	NA	180154868	180204030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_180155173_180166490_180166592_180175320_180175367_180175930_180176034_180178793_180178885_180182173_180182320_180183915_180184051_180186052_180186183_180189551_180189675_180190432_180190581_180194212_180194393_180196261
transcript_174559.known	chr6	-	3161	20	FSM	ENSG00000135597.19	ENST00000258062.9	3161	20	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_8	68.8587216386303	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGGAGGGTAGATTGT	-138985648	True	NA	-15	True	AATAAA	-16	NA	138988261	138904869	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_138905133_138907494_138907601_138908667_138908817_138911275_138911372_138912764_138912951_138914696_138914762_138915857_138915977_138917554_138917625_138920214_138920317_138921036_138921125_138926400_138926482_138929976_138930099_138941334_138941490_138943512_138943577_138943852_138944016_138944497_138944623_138945218_138945373_138945500_138945698_138947789_138947914_138987529
transcript_174567.nic	chr6	-	3148	19	NIC	ENSG00000135597.19	novel	4533	20	NA	NA	-86	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_1	74.198287058861	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGGGTAGATTGTGTTT	-138988331	False	NA	-11	True	AATAAA	-20	NA	138988347	138904865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_138905133_138908667_138908817_138911275_138911372_138912764_138912951_138914696_138914762_138915857_138915977_138917554_138917628_138920214_138920317_138921036_138921125_138926400_138926482_138929976_138930099_138941334_138941490_138943512_138943577_138943852_138944016_138944497_138944623_138945218_138945373_138945500_138945698_138947789_138947914_138987529
transcript_174571.known	chr6	-	2468	19	FSM	ENSG00000135597.19	ENST00000529597.5	2468	19	0	0	0	0	multi-exon	TRUE	canonical	3	81	junction_8	84.8422646830175	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTAGATTGTGTTTGTTGG	-138987624	False	NA	-6	True	AATAAA	-25	NA	138987640	138904860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_138905133_138907494_138907601_138908667_138908817_138911275_138911372_138912764_138912951_138914696_138914762_138915857_138915977_138917554_138917625_138920214_138920317_138921036_138921125_138929976_138930099_138941334_138941490_138943512_138943577_138943852_138944016_138944497_138944623_138945218_138945373_138945500_138945698_138947789_138947914_138987529
transcript_174591.known	chr6	-	3665	17	FSM	ENSG00000135597.19	ENST00000626459.2	3665	17	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_13	87.5380051391965	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTTGTTCATCTTTTTA	-138985648	True	NA	NA	False	AATAAA	-16	NA	138988261	138904016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_138905133_138907494_138907601_138908667_138908817_138911275_138911372_138912764_138912951_138914696_138914762_138915857_138915977_138917554_138917628_138920214_138920317_138921036_138921125_138926400_138926482_138929976_138930099_138941334_138941490_138945218_138945373_138945500_138945698_138947789_138947914_138987529
transcript_1746.known	chr1	+	547	4	FSM	ENSG00000235169.11	ENST00000444870.7	547	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	24.4449494897321	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCCTTGTACACATGGAC	3772058	True	NA	52	True	GGGGCT	-34	NA	3772786	3775982	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_3772842_3773062_3773182_3775298_3775484_3775794
transcript_174603.known	chr6	+	782	3	FSM	ENSG00000146386.8	ENST00000367660.4	782	3	0	0	0	0	multi-exon	FALSE	canonical	3	1566	junction_2	22.5	693	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTATTTTGTCATTTAAG	139013370	True	NA	32	True	AATAAA	-23	NA	139028744	139043302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_139028876_139034154_139034222_139042718
transcript_174609.known	chr6	-	2382	2	FSM	ENSG00000164442.10	ENST00000367651.4	2382	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	716	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCAGTGATGAGAGTTTT	-139371508	True	NA	NA	False	ATTAAA	-17	NA	139374648	139371806	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_139373953_139374412
transcript_174610.known	chr6	-	784	1	FSM	ENSG00000218351.2	ENST00000401762.2	784	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCAGATTTTTATTAGAG	NA	False	NA	NA	False	NA	NA	NA	141636503	141635719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_141635700_141636500
transcript_174615.known	chr6	+	6991	8	FSM	ENSG00000009844.16	ENST00000367630.9	6991	8	0	0	0	0	multi-exon	FALSE	canonical	3	1128	junction_3	75.4869903644708	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTGTTCTATTATATCAT	142137800	True	NA	NA	False	AATAAA	-16	NA	142147262	142224685	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_142147400_142166227_142166323_142169549_142169678_142170345_142170422_142189425_142189535_142198438_142198616_142203984_142204066_142218497
transcript_174622.known	chr6	+	3272	7	FSM	ENSG00000009844.16	ENST00000620996.4	3272	7	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_6	412.423090473309	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAGTGGCTCTCCGAGTG	NA	False	NA	2	True	AATAAA	-16	NA	142147161	142220946	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_142147400_142166227_142166323_142169549_142169678_142170345_142170422_142189425_142189535_142198438_142198616_142218497
transcript_174626.nic	chr6	+	3027	4	ISM	ENSG00000009844.16	ENST00000620996.4	3272	7	78	47957	-17	-25792	5prime_fragment	FALSE	canonical	3	1128	junction_3	85.050311907456	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTTGATGATTAACTATG	142137777	True	NA	NA	False	AAAAAG	-10	NA	142147239	142172989	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_142147400_142166227_142166323_142169549_142169678_142170345
transcript_174633.nnic	chr6	+	1526	7	NNC	ENSG00000146416.19	novel	1202	7	NA	NA	-39	14	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_5	80.3604725941526	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGACGTCTGCATTGTGCA	143059936	False	NA	5	True	AATAAA	-18	NA	143060813	143340304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_143061067_143136834_143136991_143165081_143165184_143284109_143284226_143333281_143333446_143335050_143335120_143339638
transcript_174635.known	chr6	+	2136	6	FSM	ENSG00000146416.19	ENST00000357847.9	2136	6	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_5	23.3888862496699	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCGTCTCTCTGTCTCTC	143058864	True	NA	NA	False	ATTAAA	-19	NA	143060888	143341058	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_143061067_143136834_143136991_143165081_143165184_143284109_143284226_143333281_143333446_143339638
transcript_174642.nic	chr6	+	789	5	ISM	ENSG00000146416.19	ENST00000367601.8	727	6	320	-89	-37	0	3prime_fragment	FALSE	canonical	3	171	junction_3	20.3393092311416	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTATTGTCTGAGGGAA	143059938	False	NA	NA	False	NA	NA	NA	143060815	143333445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_143061067_143136834_143136991_143165081_143165184_143284109_143284226_143333281
transcript_174643.nic	chr6	+	2864	5	ISM	ENSG00000146416.19	ENST00000275235.8	1202	7	-55	-20	-7	20	intron_retention	FALSE	canonical	3	171	junction_3	20.3393092311416	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGAGATTTCACATGAAGG	143059968	False	NA	NA	False	NA	NA	NA	143060845	143335550	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_143061067_143136834_143136991_143165081_143165184_143284109_143284226_143333281
transcript_174648.known	chr6	+	3393	4	FSM	ENSG00000146416.19	ENST00000494282.6	3393	4	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_3	88.1400400877301	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATTCAGTGTCCTGGCA	143058876	True	NA	NA	False	AATAAA	-26	NA	143060900	143190597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_143061067_143136834_143136991_143165081_143165184_143187628
transcript_174653.known	chr6	+	444	4	FSM	ENSG00000146416.19	ENST00000447498.5	444	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	77.4180570381068	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCATGTAACTGGCATGT	143059975	False	NA	NA	False	NA	NA	NA	143060852	143333293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_143061067_143165081_143165184_143284109_143284226_143333281
transcript_174655.nnic	chr6	+	772	3	NNC	ENSG00000146416.19	novel	559	2	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	69	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCCATTGTCAATAATTTA	143060393	True	NA	22	True	AATAAA	-27	NA	143060478	143061606	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_143060738_143060946_143061067_143061213
transcript_174658.known	chr6	+	559	2	FSM	ENSG00000146416.19	ENST00000367596.5	559	2	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCCATTGTCAATAATTTA	143058876	True	NA	22	True	AATAAA	-27	NA	143060900	143061606	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_143061067_143061213
transcript_174659.known	chr6	+	1202	7	FSM	ENSG00000146416.19	ENST00000275235.8	1202	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	90.3050386191158	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	143058876	True	NA	NA	False	NA	NA	NA	143060900	143335530	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_143061067_143136834_143136991_143165081_143165184_143284109_143284226_143333281_143333446_143334077_143334096_143335050
transcript_174664.known	chr6	-	6244	6	FSM	ENSG00000189007.16	ENST00000237283.9	6244	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	34.7701020993612	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGTTTAAAATATTATTT	-143448287	True	NA	-13	True	AATAAA	-23	NA	143450695	143422831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_143428507_143428611_143428685_143432504_143432612_143433830_143433982_143438589_143438695_143450562
transcript_174670.known	chr6	+	2750	12	FSM	ENSG00000034693.15	ENST00000367591.5	2750	12	0	0	0	0	multi-exon	TRUE	canonical	3	228	junction_11	33.5352287937317	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGAATGGATTGGAATT	143449573	True	NA	NA	False	AATAAA	-20	NA	143450804	143490616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_143451116_143459084_143459217_143462915_143462998_143468121_143468166_143470960_143471086_143471382_143471450_143471556_143471612_143472159_143472329_143474785_143474857_143479075_143479199_143485151_143485249_143489142
transcript_174677.known	chr6	-	2385	7	FSM	ENSG00000001036.14	ENST00000002165.11	2385	7	0	0	0	0	multi-exon	FALSE	canonical	3	545	junction_3	61.3124964605277	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAATATTTTCTTTCTTC	-143506188	True	NA	NA	False	CATAAA	-18	NA	143511720	143494811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_143495848_143497388_143497498_143501931_143502123_143502354_143502566_143503912_143504253_143507236_143507425_143511410
transcript_174687.nic	chr6	-	1164	5	NIC	ENSG00000001036.14	novel	2385	7	NA	NA	-5	-675	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	282.643768726643	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTCCATGTGTGACTC	-143506193	True	NA	-16	True	ATTAAA	-16	NA	143511725	143495486	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_143495848_143497388_143497498_143501931_143502123_143507236_143507425_143511410
transcript_174693.known	chr6	+	2569	13	FSM	ENSG00000112419.15	ENST00000440869.7	9633	13	0	7064	0	-43	multi-exon	FALSE	canonical	0	0	junction_11	66.2547168132202	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAAAGAGAAAATTGAA	143665852	True	NA	NA	False	AAGAAA	-24	NA	143677964	143824121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_143678210_143712015_143712184_143748984_143749066_143753753_143753913_143760400_143760641_143765260_143765799_143772257_143772458_143774058_143774216_143777327_143777384_143783218_143783281_143788772_143788911_143807056_143807134_143823673
transcript_174705.known	chr6	+	4367	12	FSM	ENSG00000112419.15	ENST00000367582.7	4367	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	50.4850849425144	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTATTTTGCAGAATATG	143665870	True	NA	NA	False	ATTAAA	-15	NA	143677982	143826177	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_143678210_143712015_143712184_143748984_143749066_143753753_143753913_143765260_143765799_143772257_143772458_143774058_143774216_143777327_143777384_143783218_143783281_143788772_143788911_143807056_143807134_143823673
transcript_174729.nic	chr6	+	1855	9	ISM	ENSG00000112419.15	ENST00000440869.7	9633	13	-12	53803	-12	11717	5prime_fragment	FALSE	canonical	2	18	junction_5	66.8551372371638	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGAGTATTCTATACTATA	143665840	True	NA	14	True	AAGAAA	-11	NA	143677952	143777382	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_143678210_143712015_143712184_143748984_143749066_143753753_143753913_143760400_143760641_143765260_143765799_143772257_143772458_143774058_143774216_143777327
transcript_174734.nic	chr6	+	1787	8	ISM	ENSG00000112419.15	ENST00000367582.7	4367	12	-202	48795	-184	11717	5prime_fragment	FALSE	canonical	3	115	junction_4	29.0460577254084	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGAGTATTCTATACTATA	NA	False	NA	14	True	AAGAAA	-11	NA	143677780	143777382	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_143678210_143712015_143712184_143748984_143749066_143753753_143753913_143765260_143765799_143772257_143772458_143774058_143774216_143777327
transcript_17475.known	chr1	-	1293	8	FSM	ENSG00000230124.8	ENST00000367595.4	1293	8	0	0	0	0	multi-exon	FALSE	canonical	3	481	junction_4	48.9122496238448	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAAGTCTCAGCAATTC	-180500780	True	NA	-15	True	AATAAA	-22	NA	180502577	180288229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_180288518_180314691_180314723_180397515_180397606_180413365_180413472_180430179_180430263_180492268_180492366_180495460_180495526_180502044
transcript_174753.known	chr6	+	825	4	FSM	ENSG00000112419.15	ENST00000402863.3	825	4	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	7.03957069398096	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTAATTAAAAGTAATAATC	143665906	True	NA	NA	False	ATTAAA	-4	NA	143678018	143754138	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_143678210_143712015_143712184_143748984_143749066_143753753
transcript_174756.known	chr6	+	358	2	FSM	ENSG00000112419.15	ENST00000545919.1	358	2	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTAAGAGTTCTGATTTG	143666060	False	NA	NA	False	AATAAA	-14	NA	143678172	143712336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_143678210_143712015
transcript_174758.known	chr6	+	1853	11	FSM	ENSG00000135521.9	ENST00000367576.6	1853	11	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_6	27.2838780234775	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATTGGTGTATTCATTT	143839225	True	NA	12	True	ATTAAA	-24	NA	143843337	143863812	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_143843481_143844485_143844618_143846050_143846225_143850130_143850219_143857302_143857445_143857751_143858008_143860425_143860554_143862103_143862244_143862843_143862897_143863085_143863287_143863416
transcript_174762.nic	chr6	+	1347	10	ISM	ENSG00000135521.9	ENST00000367576.6	1853	11	-12	648	-12	-648	5prime_fragment	FALSE	canonical	3	409	junction_6	28.5968141193696	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAAAGAATACAGATGATT	143839213	True	NA	NA	False	AAGAAA	-20	NA	143843325	143863164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_143843481_143844485_143844618_143846050_143846225_143850130_143850219_143857302_143857445_143857751_143858008_143860425_143860554_143862103_143862244_143862843_143862897_143863085
transcript_174763.nic	chr6	+	1434	10	ISM	ENSG00000135521.9	ENST00000367576.6	1853	11	-12	561	-12	-561	5prime_fragment	FALSE	canonical	3	409	junction_6	28.5968141193696	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGCAAGAAAGCAAGCTATA	143839213	True	NA	NA	False	GATAAA	-2	NA	143843325	143863251	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_143843481_143844485_143844618_143846050_143846225_143850130_143850219_143857302_143857445_143857751_143858008_143860425_143860554_143862103_143862244_143862843_143862897_143863085
transcript_174766.nic	chr6	+	2158	10	NIC	ENSG00000135521.9	novel	1853	11	NA	NA	2	0	intron_retention	FALSE	canonical	3	409	junction_5	28.2257215678305	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATTGGTGTATTCATTT	143839227	True	NA	12	True	ATTAAA	-24	NA	143843339	143863812	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_143843481_143844485_143844618_143846050_143846225_143850130_143850219_143857302_143858008_143860425_143860554_143862103_143862244_143862843_143862897_143863085_143863287_143863416
transcript_174774.nic	chr6	+	1533	6	NIC	ENSG00000135521.9	novel	1853	11	NA	NA	-3	-3099	intron_retention	FALSE	canonical	3	409	junction_5	32.7377457990009	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATAGGGCGGAAAAAAGAAA	143839222	True	NA	NA	False	AATACA	-45	NA	143843334	143860713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_143843481_143844485_143844618_143846050_143846225_143850130_143850219_143857302_143858008_143860425
transcript_174777.known	chr6	-	3229	7	FSM	ENSG00000118495.21	ENST00000649307.1	3229	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.4142135623731	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCTTGATTAATTTTTC	-144008209	True	NA	2	True	AATAAA	-18	NA	144008259	143940299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_143942664_143947984_143948461_143960468_143960543_143964786_143964819_143966157_143966199_143968906_143968979_144008089
transcript_174784.known	chr6	-	690	1	FSM	ENSG00000169976.7	ENST00000367569.4	690	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTTGGTGTGAACTTTC	-144077215	True	NA	-7	True	CATAAA	-17	NA	144095573	144094883	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_144094900_144095600
transcript_174792.known	chr6	+	3220	25	FSM	ENSG00000152818.19	ENST00000367526.8	3220	25	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_1	23.3273429810503	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCGGCCAACCAATGTTT	144583174	False	NA	NA	False	NA	NA	NA	144583209	144851003	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_144583601_144678405_144678579_144700086_144700244_144730356_144730487_144748245_144748515_144751805_144751953_144754719_144754799_144757928_144757990_144771906_144771969_144774289_144774365_144781921_144782124_144789193_144789280_144793833_144793992_144797823_144797991_144803035_144803148_144820881_144821019_144827347_144827387_144827610_144827677_144828789_144828856_144835779_144835939_144836300_144836542_144839172_144839285_144840739_144840833_144846804_144846828_144850988
transcript_174798.nic	chr6	+	3179	18	ISM	ENSG00000152818.19	ENST00000367545.8	12918	75	-452	401589	-452	25087	5prime_fragment	FALSE	canonical	3	28	junction_2	8.93846708175548	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTATATGAAGATGCAAGA	144284871	False	NA	NA	False	GATAAA	-2	NA	144284882	144451445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_144285822_144291736_144291908_144403122_144403185_144421877_144421971_144423548_144423627_144423985_144424079_144426286_144426460_144428777_144428894_144429580_144429742_144435934_144436139_144437564_144437747_144438744_144438896_144440351_144440472_144444280_144444383_144447210_144447319_144447601_144447782_144448599_144448770_144451369
transcript_174801.nic	chr6	+	2985	17	ISM	ENSG00000152818.19	ENST00000367545.8	12918	75	-408	404339	-408	22337	5prime_fragment	FALSE	canonical	3	28	junction_2	9.13932950221186	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAGCAGGAACTGCCTCC	144283997	True	NA	NA	False	NA	NA	NA	144284926	144448695	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_144285822_144291736_144291908_144403122_144403185_144421877_144421971_144423548_144423627_144423985_144424079_144426286_144426460_144428777_144428894_144429580_144429742_144435934_144436139_144437564_144437747_144438744_144438896_144440351_144440472_144444280_144444383_144447210_144447319_144447601_144447782_144448599
transcript_174809.nic	chr6	+	2141	16	NIC	ENSG00000152818.19	novel	597	6	NA	NA	-23	22337	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	11.3443084114164	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAGCAGGAACTGCCTCC	144329343	True	NA	NA	False	NA	NA	NA	144330796	144448695	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_144331019_144403122_144403185_144421877_144421971_144423548_144423627_144423985_144424079_144426286_144426460_144428777_144428894_144429580_144429742_144435934_144436139_144437564_144437747_144438744_144438896_144440351_144440472_144444280_144444383_144447210_144447319_144447601_144447782_144448599
transcript_17481.known	chr1	+	5844	6	FSM	ENSG00000121454.6	ENST00000263726.4	5844	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	5.81721582889959	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGATGTGTCTTGCTTTT	180229972	True	NA	10	True	AATAAA	-18	NA	180230263	180278984	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_180230606_180248284_180248457_180266391_180266595_180271379_180271535_180271834_180272007_180274184
transcript_174810.nic	chr6	+	2777	15	ISM	ENSG00000152818.19	ENST00000367545.8	12918	75	-554	405794	-554	20882	5prime_fragment	FALSE	canonical	3	28	junction_2	9.20181880867881	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGGCTTTAAATAAAGT	NA	False	NA	NA	False	NA	NA	NA	144284780	144447240	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_144285822_144291736_144291908_144403122_144403185_144421877_144421971_144423548_144423627_144423985_144424079_144426286_144426460_144428777_144428894_144429580_144429742_144435934_144436139_144437564_144437747_144438744_144438896_144440351_144440472_144444280_144444383_144447210
transcript_174820.nic	chr6	+	1958	9	ISM	ENSG00000152818.19	ENST00000367545.8	12918	75	-554	423323	-554	3353	5prime_fragment	FALSE	canonical	3	28	junction_2	8.91277173498794	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGTGAAGAAGAGGCAAT	NA	False	NA	NA	False	TATAAA	-4	NA	144284780	144429711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_144285822_144291736_144291908_144403122_144403185_144421877_144421971_144423548_144423627_144423985_144424079_144426286_144426460_144428777_144428894_144429580
transcript_174821.nic	chr6	+	1032	8	NIC	ENSG00000152818.19	novel	597	6	NA	NA	-87	3353	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	12.8444381674223	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGTGAAGAAGAGGCAAT	NA	False	NA	NA	False	TATAAA	-4	NA	144330732	144429711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_144331019_144403122_144403185_144421877_144421971_144423548_144423627_144423985_144424079_144426286_144426460_144428777_144428894_144429580
transcript_174824.known	chr6	-	3045	5	FSM	ENSG00000112425.16	ENST00000638554.1	3045	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	7.29297607290741	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTCTGTACAGGATTTT	-145735232	False	210	-21	True	AATAAA	-14	NA	145735276	145625305	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_145627694_145635244_145635487_145671238_145671400_145686121_145686297_145735197
transcript_174825.known	chr6	-	3335	5	FSM	ENSG00000112425.16	ENST00000639049.1	3335	5	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_3	6.57647321898295	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGTACAGGATTTTTA	-145735260	True	NA	-19	True	AATAAA	-16	NA	145735470	145625303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_145627694_145635244_145635487_145686121_145686297_145720900_145721156_145735197
transcript_174827.known	chr6	-	3129	4	FSM	ENSG00000112425.16	ENST00000367519.9	3129	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	0.816496580927726	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTGTACAGGATTTTT	-145735310	True	NA	-20	True	AATAAA	-15	NA	145735520	145625304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_145627694_145635244_145635487_145686121_145686297_145735197
transcript_174828.known	chr6	-	1388	4	FSM	ENSG00000112425.16	ENST00000640351.1	1388	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	8.99382504215469	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAGCAAAAAATACCCTTG	-145735237	False	210	NA	False	NA	NA	NA	145735281	145626759	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_145627694_145635244_145635487_145686121_145686297_145735244
transcript_174831.known	chr6	-	2679	3	FSM	ENSG00000112425.16	ENST00000638262.1	2679	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATGATACAAAGATCTTT	-145735288	True	NA	45	True	AAGAAA	-16	NA	145735498	145625490	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_145627694_145686121_145686297_145735197
transcript_174833.known	chr6	-	2786	4	FSM	ENSG00000112425.16	ENST00000611340.5	2786	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	9.93310961716756	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTCAAAATCACCCAAAAC	-145735979	False	NA	-68	True	AATAAA	-36	NA	145736023	145625352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_145627694_145635244_145635487_145686121_145686297_145735995
transcript_174839.known	chr6	-	7596	30	FSM	ENSG00000146414.17	ENST00000275233.12	7596	30	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_29	15.316013240832	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGAATTCTTTGATTTC	-145963346	True	NA	NA	False	AATAAA	-21	NA	145964358	145884806	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_145886788_145888019_145888101_145893214_145893394_145894149_145894237_145894884_145894978_145910447_145910637_145913477_145913550_145918130_145918233_145919347_145919492_145921166_145921393_145922285_145922349_145922662_145922837_145923642_145923786_145924738_145924847_145926203_145926297_145927188_145927278_145933056_145933179_145934906_145935164_145935277_145935442_145940722_145940802_145941622_145941875_145943142_145943803_145945380_145945638_145946232_145946342_145947492_145947644_145948271_145948351_145950263_145950483_145952348_145952479_145954689_145955355_145963730
transcript_174843.nic	chr6	-	1474	9	ISM	ENSG00000146414.17	ENST00000519632.5	5245	24	70	28268	5	179	5prime_fragment	FALSE	canonical	2	17	junction_7	14.7457621030586	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACAGAGCTTAAGTTCAG	-145963341	True	NA	NA	False	GATAAA	-13	NA	145964353	145945380	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_145945638_145946232_145946342_145947492_145947644_145948271_145948351_145950263_145950483_145952348_145952479_145954689_145954854_145955186_145955355_145964156
transcript_174850.known	chr6	-	9051	3	FSM	ENSG00000118496.5	ENST00000237281.5	9051	3	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_1	1.5	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTATGCTTTTGTATT	-145810104	True	NA	NA	False	AATAAA	-16	NA	145814795	145793501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_145800310_145804371_145806422_145814602
transcript_174856.known	chr6	+	1065	3	FSM	ENSG00000118508.5	ENST00000367495.4	1065	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	3	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTATGGTCATTTTGAGT	146543548	True	NA	6	True	AATAAA	-13	NA	146543832	146554953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_146544122_146549463_146549742_146554455
transcript_174857.known	chr6	+	7460	20	FSM	ENSG00000111961.19	ENST00000367467.8	7460	20	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_10	5.04934103377324	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCCTTTTTTGTTGTTTC	148341171	True	NA	12	True	AATAAA	-15	NA	148342837	148552044	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_148343224_148390133_148390263_148440183_148440235_148440357_148440408_148468544_148468586_148471416_148471504_148474109_148474223_148487613_148487716_148514323_148514457_148519546_148519894_148525290_148525366_148527452_148527597_148531525_148531662_148532796_148532967_148533770_148533981_148534750_148534902_148540442_148540557_148543679_148544819_148546014_148546147_148548294
transcript_174859.known	chr6	+	4496	8	FSM	ENSG00000111962.8	ENST00000367463.5	4496	8	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_5	22.821400625961	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAAGCATTCCTTAACTT	148743754	True	NA	11	True	AATAAA	-17	NA	148747029	149076990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_148747678_148886985_148887030_148941278_148941435_148953871_148953952_148964409_148964564_149019138_149019237_149021323_149021482_149073832
transcript_174863.nic	chr6	+	2622	7	ISM	ENSG00000111962.8	ENST00000367463.5	4496	8	-145	54370	-145	17032	5prime_fragment	FALSE	canonical	3	185	junction_5	24.1160389229519	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGAAGCAGCAGATGAAA	148746748	True	NA	NA	False	AAAAAG	-12	NA	148746884	149022620	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_148747678_148886985_148887030_148941278_148941435_148953871_148953952_148964409_148964564_149019138_149019237_149021323
transcript_174873.known	chr6	+	4363	7	FSM	ENSG00000055208.19	ENST00000637181.2	4363	7	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	14.7535306508872	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGATTTTGTGACTTGTT	149315673	True	NA	13	True	ATTAAA	-16	NA	149317711	149411607	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_149318016_149369908_149370100_149378017_149379519_149397603_149397765_149397968_149398063_149399103_149399185_149409576
transcript_174878.known	chr6	-	2475	13	FSM	ENSG00000131013.4	ENST00000253329.3	2475	13	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_6	27.147232312378	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTAGTTTTTTTTTC	-149538772	True	NA	NA	False	NA	NA	NA	149546043	149504494	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_149505705_149512154_149512303_149517353_149517451_149521059_149521172_149525142_149525210_149526651_149526777_149533457_149533575_149534677_149534775_149535595_149535739_149540941_149541060_149541366_149541432_149541518_149541587_149545935
transcript_17488.known	chr1	+	8484	15	FSM	ENSG00000143324.14	ENST00000367590.9	8484	15	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_12	14.6419860368066	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTGTGTGACTGTTTTT	180624409	True	NA	57	True	NA	NA	NA	180632021	180890279	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_180632271_180682359_180682412_180787752_180787855_180803387_180803612_180806061_180806212_180806473_180806558_180811406_180811489_180824752_180824944_180825164_180825345_180834873_180835046_180836521_180836717_180863707_180863875_180873802_180873943_180880075_180880298_180884005
transcript_174885.nic	chr6	-	1265	12	ISM	ENSG00000131013.4	ENST00000253329.3	2475	13	-62	7722	-62	-6942	5prime_fragment	FALSE	canonical	3	315	junction_5	25.8731808559231	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATCACTGTTCTGAAGAG	-149538834	True	NA	NA	False	AGTAAA	-17	NA	149546105	149512216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_149512303_149517353_149517451_149521059_149521172_149525142_149525210_149526651_149526777_149533457_149533575_149534677_149534775_149535595_149535739_149540941_149541060_149541366_149541432_149541518_149541587_149545935
transcript_174889.known	chr6	+	1943	8	FSM	ENSG00000055211.14	ENST00000367419.10	1943	8	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_7	3.61403161162101	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATAGCTGTTTTGGTTACA	149564253	True	NA	29	True	AATAAA	-29	NA	149566374	149591748	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_149566535_149572284_149572345_149572506_149572604_149578821_149578974_149579833_149579991_149580592_149580724_149582439_149582604_149590726
transcript_174901.known	chr6	+	2026	8	FSM	ENSG00000055211.14	ENST00000650599.1	2026	8	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_5	68.6220051575057	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATAGCTGTTTTGGTTACA	149565992	False	NA	29	True	AATAAA	-29	NA	149566293	149591748	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_149566535_149572284_149572345_149572506_149572604_149578821_149578974_149579833_149579991_149580590_149580724_149582439_149582604_149590726
transcript_174903.nnic	chr6	-	2246	11	NNC	ENSG00000186625.14	novel	1898	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_10	49.4833305265521	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTTACTTTAGCATTA	-149645755	True	NA	0	True	AATAAA	-23	NA	149648714	149594872	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_149595235_149597062_149597190_149597506_149597642_149598223_149598351_149601593_149601753_149603267_149603374_149604660_149604783_149623102_149623284_149632758_149632917_149638385_149638561_149648120
transcript_174904.known	chr6	-	1898	11	FSM	ENSG00000186625.14	ENST00000367411.7	1898	11	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_4	17.4802745973855	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTTACTTTAGCATTA	-149645755	True	NA	0	True	AATAAA	-23	NA	149648714	149594872	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_149595235_149597062_149597190_149597506_149597642_149598223_149598351_149601593_149601753_149603267_149603374_149604660_149604783_149623102_149623284_149632758_149632917_149638385_149638561_149648468
transcript_17491.known	chr1	+	4126	14	FSM	ENSG00000143324.14	ENST00000367589.3	4126	14	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_10	44.2877893332199	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGTTAACAATTTAGTG	180624419	True	NA	NA	False	AATAAA	-19	NA	180632031	180886126	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_180632271_180682359_180682412_180787752_180787855_180803387_180803612_180806061_180806212_180806473_180806558_180811406_180811489_180824752_180824944_180825164_180825345_180834873_180835046_180863707_180863875_180873802_180873943_180880075_180880298_180884005
transcript_174912.nic	chr6	-	805	4	ISM	ENSG00000186625.14	ENST00000444282.5	1138	7	-35	21490	-35	-19766	5prime_fragment	FALSE	canonical	3	170	junction_3	9.46337971105226	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAACAGAATAAAGGAAGAGA	NA	False	NA	NA	False	AAGAAA	-1	NA	149648786	149623129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_149623284_149632758_149632917_149638385_149638561_149648468
transcript_174914.known	chr6	-	2567	4	FSM	ENSG00000131023.13	ENST00000392273.7	2567	4	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	10.2740233382816	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAGCATTTTATTTTAGT	-149713907	True	NA	-12	True	AATAAA	-18	NA	149718105	149682918	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_149684593_149695073_149695222_149701778_149702267_149717848
transcript_174916.known	chr6	+	1268	1	FSM	ENSG00000278899.1	ENST00000623174.1	1268	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGTTAAAGTAATAACTGGC	149717588	True	NA	NA	False	ATTAAA	-15	NA	149717620	149718888	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_149717600_149718900
transcript_174928.known	chr6	+	1938	8	FSM	ENSG00000120265.19	ENST00000367384.7	1938	8	0	0	0	0	multi-exon	FALSE	canonical	3	759	junction_7	375.391931240958	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGTTGTTTTTGAATATA	149749398	False	NA	NA	False	AATAAA	-19	NA	149749442	149811420	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_149749957_149771161_149771267_149773137_149773170_149789953_149790059_149793548_149793670_149796414_149796501_149802199_149802370_149810615
transcript_174930.known	chr6	+	1686	8	FSM	ENSG00000120265.19	ENST00000464889.7	1686	8	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_7	502.892165988142	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTTGTTTTTGAATAT	149734563	True	NA	NA	False	AATAAA	-18	NA	149749740	149811419	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_149749957_149771161_149771267_149773137_149773170_149789953_149790059_149793548_149793670_149796414_149796501_149802199_149802417_149810615
transcript_174932.known	chr6	-	3831	8	FSM	ENSG00000120253.14	ENST00000340413.7	3831	8	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_6	18.9208879284245	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTCTATCTGTCTTAT	-149735792	True	NA	-1	True	AATAAA	-26	NA	149746529	149724314	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_149727199_149731612_149731736_149736470_149736623_149738642_149738779_149742389_149742571_149743637_149743716_149745939_149746063_149746375
transcript_174937.known	chr6	+	1293	7	FSM	ENSG00000120265.19	ENST00000367378.6	1293	7	0	0	0	0	multi-exon	FALSE	canonical	3	1668	junction_4	88.3421379259826	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGTCTGCCCTTATTT	149749399	False	NA	22	True	ATTAAA	-15	NA	149749443	149802530	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_149749957_149771161_149771267_149773137_149773170_149789953_149790059_149793548_149793670_149796414_149796501_149802199
transcript_174938.known	chr6	+	1628	7	FSM	ENSG00000120265.19	ENST00000544496.5	1628	7	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	749.536449339783	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGTTGTTTTTGAATATA	149749650	False	NA	NA	False	AATAAA	-19	NA	149749694	149811420	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_149749957_149771161_149771267_149773137_149773170_149793548_149793670_149796414_149796501_149802199_149802417_149810615
transcript_174939.known	chr6	+	1628	7	FSM	ENSG00000120265.19	ENST00000367380.9	1628	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	762.333132925203	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGTTGTTTTTGAATATA	149749650	False	NA	NA	False	AATAAA	-19	NA	149749694	149811420	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_149749957_149773137_149773170_149789953_149790059_149793548_149793670_149796414_149796501_149802199_149802417_149810615
transcript_174940.known	chr6	-	3634	7	FSM	ENSG00000120256.11	ENST00000239367.7	3634	7	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	13.1233464566864	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACTGAGCTGTTACTGCA	-149863753	True	NA	34	True	AATATA	-18	NA	149864359	149818756	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_149820704_149826263_149826360_149836084_149836298_149837337_149837464_149842982_149843125_149853002_149853161_149863407
transcript_174945.known	chr6	-	904	5	FSM	ENSG00000203722.8	ENST00000367361.6	904	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.866025403784439	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTCCCTGGGCCCAGCT	-149922986	False	NA	NA	False	NA	NA	NA	149923010	149916912	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_149917075_149918173_149918285_149919042_149919325_149919552_149919817_149922925
transcript_174946.known	chr6	-	3158	4	FSM	ENSG00000120256.11	ENST00000367368.3	3158	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	56.3461523876199	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGAGTGGTGTGTGAAT	-149864003	False	606	-2	True	AATAAA	-15	NA	149864026	149840437	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_149842677_149842982_149843125_149853002_149853161_149863407
transcript_174947.known	chr6	-	3111	5	FSM	ENSG00000131019.11	ENST00000367339.7	3111	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	2.91547594742265	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAGATTTCCATTTCCAT	-150068747	True	NA	NA	False	ATTAAA	-19	NA	150069121	150061052	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_150063352_150064584_150064714_150065397_150065674_150065898_150066163_150068978
transcript_17495.nnic	chr1	+	2701	5	NNC	ENSG00000143324.14	novel	4126	14	NA	NA	-20	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	83.0462973286588	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGTTAACAATTTAGTG	180624389	True	NA	NA	False	AATAAA	-19	NA	180632001	180886126	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_180632271_180682359_180682412_180787752_180787790_180880075_180880298_180884005
transcript_174954.known	chr6	+	2219	4	FSM	ENSG00000198729.5	ENST00000361131.5	2219	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	2.94392028877595	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGATGGTTTTGCTGTGTC	150142948	True	NA	40	True	NA	NA	NA	150143043	150250392	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_150143499_150214743_150214828_150216823_150216857_150248745
transcript_17496.nnic	chr1	+	2917	5	NNC	ENSG00000143324.14	novel	4126	14	NA	NA	-20	216	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	83.0462973286588	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCCAGAGACATTTGAATT	180624389	True	NA	11	True	AATAAA	-19	NA	180632001	180886342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_180632271_180682359_180682412_180787752_180787790_180880075_180880298_180884005
transcript_174968.known	chr6	+	3475	28	FSM	ENSG00000120254.16	ENST00000611279.4	3475	28	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_20	75.7754968702016	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGCAAGTTTTCAGTGC	150861412	True	NA	18	True	AATAAA	-18	NA	150865678	151101885	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_150866050_150876089_150876175_150877633_150877685_150877772_150877827_150882761_150882887_150885633_150885735_150887841_150887982_150905649_150905762_150918576_150918669_150922204_150922303_150926121_150926296_150936803_150936941_150938698_150938746_150944485_150944594_150945466_150945542_150949030_150949134_150955994_150956072_150960274_150960416_150964968_150965038_150971946_150972059_151009818_151009959_151013778_151013821_151014879_151014981_151015515_151015694_151034492_151034601_151036964_151037118_151092466_151092588_151101525
transcript_174969.known	chr6	+	3451	28	FSM	ENSG00000120254.16	ENST00000367321.8	3451	28	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_20	76.7300864904993	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCAAGTTTTCAGTGCCA	150861435	True	NA	20	True	AATAAA	-20	NA	150865701	151101887	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_150866050_150876089_150876175_150877633_150877685_150877772_150877827_150882761_150882887_150885633_150885735_150887844_150887982_150905649_150905762_150918576_150918669_150922204_150922303_150926121_150926296_150936803_150936941_150938698_150938746_150944485_150944594_150945466_150945542_150949030_150949134_150955994_150956072_150960274_150960416_150964968_150965038_150971946_150972059_151009818_151009959_151013778_151013821_151014879_151014981_151015515_151015694_151034492_151034601_151036964_151037118_151092466_151092588_151101525
transcript_174997.nic	chr6	+	1100	8	NIC	ENSG00000120254.16	novel	1049	8	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	185	junction_7	103.937972083432	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCTGTCATGACTTTTT	150861401	True	NA	34	True	ATTAAA	-40	NA	150865667	150899021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_150866050_150876089_150876175_150877633_150877685_150877772_150877827_150882761_150882887_150885633_150885735_150887841_150887982_150898859
transcript_174998.known	chr6	+	1049	8	FSM	ENSG00000120254.16	ENST00000367307.8	1049	8	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_7	110.221113574265	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCTGTCATGACTTTTT	150861449	True	NA	34	True	ATTAAA	-40	NA	150865715	150899021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_150866050_150876089_150876175_150877633_150877685_150877772_150877827_150882761_150882887_150885633_150885735_150887844_150887982_150898859
transcript_175005.known	chr6	+	373	2	FSM	ENSG00000120254.16	ENST00000421497.1	373	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTGAGTTGCCAGTCTT	150905657	True	NA	NA	False	ATTAAA	-12	NA	150905669	150912948	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_150905762_150912667
transcript_175006.known	chr6	+	8466	5	FSM	ENSG00000131016.17	ENST00000402676.7	8466	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	164.229260486675	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACTGTGATTCAGTTTC	151239905	True	NA	39	True	AATAAA	-40	NA	151239966	151358559	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_151240060_151240383_151240725_151305746_151305904_151348710_151353753_151355726
transcript_175008.known	chr6	+	6597	4	FSM	ENSG00000131016.17	ENST00000253332.5	6597	4	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_1	83.3559969181715	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTGCTGGTTTTATTAG	151235467	True	NA	15	True	AATAAA	-16	NA	151240373	151356773	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_151240725_151305746_151305904_151348710_151353753_151355726
transcript_175009.nic	chr6	+	1139	3	ISM	ENSG00000131016.17	ENST00000253332.5	6597	4	-152	7584	-152	3	5prime_fragment	FALSE	canonical	3	267	junction_1	16.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGGAAGGAGAAGAGAAACA	151240189	False	NA	NA	False	NA	NA	NA	151240221	151349189	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_151240725_151305746_151305904_151348710
transcript_175010.nic	chr6	+	1324	3	ISM	ENSG00000131016.17	ENST00000253332.5	6597	4	-152	7399	-152	188	5prime_fragment	FALSE	canonical	3	267	junction_1	16.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAACAAGAGCCAGAAAAAG	151240189	False	NA	NA	False	AAGAAA	-3	NA	151240221	151349374	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_151240725_151305746_151305904_151348710
transcript_175013.nic	chr6	+	2076	3	ISM	ENSG00000131016.17	ENST00000253332.5	6597	4	-77	6572	-77	1015	5prime_fragment	FALSE	canonical	3	267	junction_1	16.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGGTGTCACTCCCTGG	151240275	False	NA	NA	False	NA	NA	NA	151240296	151350201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_151240725_151305746_151305904_151348710
transcript_175017.known	chr6	+	6287	3	FSM	ENSG00000131016.17	ENST00000354675.10	6287	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	223	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTGCTGGTTTTATTAG	151324938	False	NA	15	True	AATAAA	-16	NA	151325687	151356773	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_151325886_151348710_151353753_151355726
transcript_175020.nnic	chr6	-	3177	4	NNC	ENSG00000181472.5	novel	3103	3	NA	NA	-167	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	42.7577153531643	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATGTCATGTCATCTCT	-151391705	False	NA	-9	True	AATAAA	-19	NA	151391726	151364114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_151366893_151373464_151373650_151391419_151391507_151391599
transcript_175023.known	chr6	-	3103	3	FSM	ENSG00000181472.5	ENST00000325144.5	3103	3	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	8.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATGTCATGTCATCTCT	-151390468	True	NA	-9	True	AATAAA	-19	NA	151391559	151364114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_151366893_151373464_151373650_151391419
transcript_175026.known	chr6	-	1871	13	FSM	ENSG00000155906.20	ENST00000684765.1	1871	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	62.7581336030106	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGAGACTCAGTCTCAAA	-151448743	True	NA	-69	True	NA	NA	NA	151452146	151404905	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_151405268_151405719_151405837_151417278_151417400_151418532_151418580_151421244_151421322_151422540_151422606_151423524_151423632_151427481_151427583_151430137_151430178_151433154_151433231_151436445_151436555_151445307_151445826_151452015
transcript_175029.known	chr6	-	1948	12	FSM	ENSG00000155906.20	ENST00000444024.3	1948	12	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_8	19.3382248965297	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGTATCTACATCACT	-151448723	True	NA	-14	True	AATAAA	-16	NA	151452126	151404761	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_151405268_151405719_151405837_151417278_151417400_151421244_151421322_151422540_151422606_151423524_151423632_151427481_151427583_151430137_151430178_151433154_151433231_151436445_151436555_151445307_151445826_151452015
transcript_175034.nic	chr6	-	1383	11	NIC	ENSG00000155906.20	novel	1413	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_9	63.5758601986635	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGGGTGATCATTTAAT	-151448742	True	NA	-17	True	AATAAA	-27	NA	151452145	151404853	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_151405268_151405719_151405837_151417278_151417400_151421244_151421322_151422540_151422606_151423524_151423632_151427481_151427583_151430137_151430178_151433154_151433231_151436419_151436555_151452015
transcript_175035.known	chr6	-	1340	11	FSM	ENSG00000155906.20	ENST00000622845.5	1340	11	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_10	47.5936970616909	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAACAATAAAATAAATAAA	-151448755	True	NA	-47	True	NA	NA	NA	151452158	151404883	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_151405268_151405719_151405837_151417278_151417400_151421244_151421322_151422540_151422606_151423524_151423632_151427481_151427583_151430137_151430178_151433154_151433231_151436445_151436555_151452015
transcript_175037.known	chr6	-	1229	5	FSM	ENSG00000155906.20	ENST00000683740.1	1229	5	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	11.7765657133139	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACTCATGGGAAATAATTT	-151448743	True	NA	NA	False	NA	NA	NA	151452146	151429782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_151430178_151433154_151433231_151436445_151436555_151445307_151445826_151452015
transcript_175038.known	chr6	-	915	2	FSM	ENSG00000155906.20	ENST00000643564.1	915	2	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAATTCTTCATCAAGT	-151448671	True	NA	NA	False	AATAAA	-16	NA	151452074	151444969	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_151445826_151452015
transcript_175041.known	chr6	+	2397	5	FSM	ENSG00000146476.11	ENST00000367294.4	2397	5	0	0	0	0	multi-exon	FALSE	canonical	3	820	junction_4	36.503424496888	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTGGTTTTATTTTCT	151445292	True	NA	9	True	AATAAA	-18	NA	151452465	151470101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_151452587_151454547_151454654_151458327_151458573_151464452_151464619_151468342
transcript_175046.known	chr6	+	712	4	FSM	ENSG00000146476.11	ENST00000494826.1	712	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	401.63360859813	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTCTGGATTTGAGCTTG	151445312	True	NA	NA	False	AAAAAG	-32	NA	151452485	151468542	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_151452587_151458327_151458573_151464452_151464619_151468342
transcript_175057.known	chr6	-	3651	7	FSM	ENSG00000112031.16	ENST00000464135.5	3651	7	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_5	50.261538199922	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTGTATCCAGCATCAT	-152997229	True	NA	-107	True	AATAAA	-33	NA	153002685	152987361	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_152990096_152991184_152991322_152992856_152992975_152994512_152994677_152995135_152995295_152998549_152998630_153002426
transcript_175058.known	chr6	-	3700	7	FSM	ENSG00000112031.16	ENST00000367233.10	3700	7	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_2	32.8722273862501	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTGTATCCAGCATCAT	-152997253	True	NA	-107	True	AATAAA	-33	NA	153002709	152987361	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_152990096_152991184_152991322_152992856_152992975_152994512_152994677_152995135_152995320_152998549_152998630_153002426
transcript_175070.known	chr6	-	3514	6	FSM	ENSG00000112031.16	ENST00000485512.5	3514	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	74.4166648002986	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTGTATCCAGCATCAT	-152997229	True	NA	-107	True	AATAAA	-33	NA	153002685	152987361	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_152990096_152992856_152992975_152994512_152994677_152995135_152995295_152998549_152998630_153002426
transcript_175071.known	chr6	-	3539	6	FSM	ENSG00000112031.16	ENST00000367231.9	3539	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	65.2674497739876	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTGTATCCAGCATCAT	-152997229	True	NA	-107	True	AATAAA	-33	NA	153002685	152987361	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_152990096_152992856_152992975_152994512_152994677_152995135_152995320_152998549_152998630_153002426
transcript_175072.known	chr6	-	3431	6	FSM	ENSG00000112031.16	ENST00000367230.5	3431	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	77.6592557265391	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTGTATCCAGCATCAT	-152997229	True	NA	-107	True	AATAAA	-33	NA	153002685	152987361	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_152990096_152992856_152992975_152994512_152994677_152995243_152995320_152998549_152998630_153002426
transcript_17508.known	chr1	-	4810	8	FSM	ENSG00000135823.14	ENST00000258301.6	4810	8	0	0	0	0	multi-exon	FALSE	canonical	1	125	junction_6	100.147646105179	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAACTTGAAAAGGACTGA	-181012011	True	NA	-9	True	AATAAA	-16	NA	181022870	180972724	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_180976647_180984676_180984772_180988238_180988346_180989983_180990110_180993362_180993426_181002605_181002701_181005293_181005464_181022638
transcript_175086.known	chr6	-	2054	5	FSM	ENSG00000112029.10	ENST00000229758.8	2054	5	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_4	9.97496867163	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAAGCTTAATGTATACC	-152978202	True	NA	-17	True	AATAAA	-16	NA	152983041	152970534	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_152971415_152972271_152972455_152973045_152973137_152974906_152975622_152982856
transcript_175087.known	chr6	-	2221	5	FSM	ENSG00000112029.10	ENST00000367241.3	2221	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	125.874937934443	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAATGTATACCTTTTAT	-152982803	True	NA	-11	True	AATAAA	-22	NA	152983579	152970528	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_152971415_152972271_152972455_152973045_152973137_152974906_152975622_152983233
transcript_175090.known	chr6	+	2090	3	FSM	ENSG00000227627.4	ENST00000637995.1	2090	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	3.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGCGCGGTGGCTCACA	152983143	True	NA	NA	False	ATTAAA	-6	NA	152983330	152990541	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_152983488_152987955_152988023_152988675
transcript_175091.known	chr6	+	1478	3	FSM	ENSG00000227627.4	ENST00000654706.2	1512	3	33	1	7	-1	multi-exon	FALSE	canonical	3	8	junction_1	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGCGTCTTGTTTATTCT	152983489	True	NA	3	True	CATAAA	-14	NA	152983725	152990006	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_152983806_152987955_152988023_152988675
transcript_175092.nic	chr6	-	1213	2	ISM	ENSG00000112029.10	ENST00000229758.8	2054	5	-511	4570	27	-4570	5prime_fragment	FALSE	canonical	3	308	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATGCAAAACGAAATCCTA	-152982776	True	NA	-12	True	ATTAAA	-4	NA	152983552	152975104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_152975622_152982856
transcript_175095.known	chr6	-	447	2	FSM	ENSG00000112031.16	ENST00000482526.1	447	2	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCACATGGTCCTGTTTTC	-152997080	False	NA	NA	False	AATAAA	-20	NA	153002536	152998292	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_152998630_153002426
transcript_175096.known	chr6	-	7932	5	FSM	ENSG00000091844.8	ENST00000206262.2	7932	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	4.82182538049648	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTAGAAAGTTACTGTTT	-153129480	True	NA	-7	True	AATAAA	-16	NA	153131282	153004458	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_153011763_153024261_153024497_153026453_153026544_153043899_153044044_153131123
transcript_175097.known	chr6	-	447	1	FSM	ENSG00000218426.5	ENST00000492974.2	447	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCGCATGGAGGGAGTTTC	-153279188	False	NA	-51	True	NA	NA	NA	153282733	153282286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_153282300_153282700
transcript_175098.known	chr6	-	21078	13	FSM	ENSG00000153721.19	ENST00000607772.6	21078	13	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_12	4.29065522061867	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTTTGCAGCAAAATGC	-154510253	True	NA	NA	False	AATAAA	-15	NA	154510685	154387514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_154406653_154410342_154410433_154410933_154411143_154414298_154414424_154422505_154422653_154422914_154422984_154428127_154428188_154430471_154430592_154433465_154433508_154441291_154441380_154442087_154442291_154450094_154450259_154510062
transcript_175101.known	chr6	+	5127	20	FSM	ENSG00000213079.10	ENST00000367178.8	5127	20	0	0	0	0	multi-exon	TRUE	canonical	3	101	junction_7	21.227823690029	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTGTATAATATCTGTG	154729679	True	NA	NA	False	TATAAA	-19	NA	154733415	154834221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_154733931_154773988_154774073_154778000_154778046_154787860_154788023_154792822_154792977_154795008_154795140_154801970_154802148_154803543_154803624_154805368_154805487_154808069_154808202_154808685_154808799_154810014_154810209_154815715_154815817_154818478_154818593_154820176_154820334_154822275_154822410_154824233_154824379_154827171_154827241_154830921_154831141_154831938
transcript_175107.known	chr6	+	6094	27	FSM	ENSG00000146426.19	ENST00000682666.1	6094	27	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	7.9641393001943	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCATTGGCATTTGTA	154994280	True	NA	5	True	AGTAAA	-17	NA	154995314	155257723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_154995493_155090288_155090380_155127489_155127601_155129217_155130418_155137176_155137613_155144605_155144779_155148109_155148335_155164414_155164601_155165262_155165410_155176815_155176978_155179038_155179144_155179377_155179457_155182225_155182319_155183236_155183501_155211203_155211308_155240529_155240710_155244010_155244080_155244657_155244784_155245622_155245732_155247999_155248180_155249850_155249970_155250912_155251022_155251944_155252004_155252947_155253054_155253972_155254061_155254418_155254574_155256483
transcript_175111.known	chr6	+	3275	21	FSM	ENSG00000146426.19	ENST00000456877.6	3275	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.2756994895725	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAACTGTTCATT	155149084	True	NA	NA	False	TTTAAA	-33	NA	155149108	155257200	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_155149227_155164414_155164601_155165262_155165410_155176815_155176978_155179038_155179144_155179377_155179457_155182225_155182319_155183236_155183501_155211203_155211308_155240529_155240710_155244010_155244080_155244657_155244784_155245622_155245732_155247999_155248180_155249850_155249970_155250912_155251022_155251944_155252004_155252947_155253054_155253972_155254061_155254418_155254574_155256483
transcript_175112.known	chr6	-	2799	7	FSM	ENSG00000029639.11	ENST00000367166.5	2799	7	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_4	34.6217657935968	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGTGCTTTGTAATTTG	-155311144	True	NA	-8	True	AATAAA	-20	NA	155314484	155256133	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_155258083_155260272_155260401_155285157_155285278_155296952_155297105_155298476_155298586_155311187_155311340_155314295
transcript_175113.nic	chr6	-	1106	7	NIC	ENSG00000029639.11	novel	2799	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	185.921130231791	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTCTTTTAATATATACT	-155311144	True	NA	NA	False	AATAAA	-26	NA	155314484	155257652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_155257909_155260272_155260401_155285157_155285278_155296952_155297105_155298476_155298586_155311187_155311340_155314295
transcript_175122.nic	chr6	-	850	6	ISM	ENSG00000029639.11	ENST00000367166.5	2799	7	0	4139	0	550	5prime_fragment	FALSE	canonical	3	458	junction_3	36.5042463283383	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAATGCCTTTTCTTCT	-155311144	True	NA	NA	False	NA	NA	NA	155314484	155260272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_155260401_155285157_155285278_155296952_155297105_155298476_155298586_155311187_155311340_155314295
transcript_175124.nic	chr6	-	2234	5	NIC	ENSG00000029639.11	novel	2799	7	NA	NA	-9	13118	combination_of_known_junctions	FALSE	canonical	3	19	junction_4	215.74406133194	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTGACCATGTAGCTTGA	-155311162	True	NA	NA	False	AATAAA	-10	NA	155314502	155283842	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_155285278_155296952_155297105_155298476_155298586_155311187_155311340_155314116
transcript_175125.nic	chr6	-	2042	5	ISM	ENSG00000029639.11	ENST00000367166.5	2799	7	-5	27709	4	13118	5prime_fragment	FALSE	canonical	3	458	junction_2	40.8105378548237	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTGACCATGTAGCTTGA	-155311149	True	NA	NA	False	AATAAA	-10	NA	155314489	155283842	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_155285278_155296952_155297105_155298476_155298586_155311187_155311340_155314295
transcript_175126.nnic	chr6	-	709	4	NNC	ENSG00000029639.11	novel	2799	7	NA	NA	-51	9	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	252.948391749955	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGTACAAGCTTTCTTT	-155311204	True	NA	NA	False	AATAAA	-15	NA	155314544	155257663	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_-_155257909_155298522_155298586_155311187_155311340_155314295
transcript_17513.known	chr1	-	4809	6	FSM	ENSG00000135823.14	ENST00000542060.5	4809	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	156.715538476566	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACTGAATTACTAGAATGA	NA	False	NA	4	True	AATAAA	-29	NA	181023121	180972711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_180976647_180984676_180984772_180988238_180988346_180989983_180990110_180993362_180993426_181022638
transcript_175130.known	chr6	-	433	3	FSM	ENSG00000029639.11	ENST00000470239.1	433	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	281.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAATAAGATACAGTACAA	-155311144	True	NA	NA	False	AATAAA	-6	NA	155314484	155257672	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_155257909_155311331_155311340_155314295
transcript_175131.known	chr6	+	7962	19	FSM	ENSG00000049618.24	ENST00000350026.10	7962	19	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	18.6603825401091	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAACTTGATGTAAAT	156777762	False	NA	NA	False	TTTAAA	-12	NA	156777929	157209142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_156779472_156829226_156829422_156901375_156901526_156935465_156935577_157084661_157084906_157110471_157110562_157133027_157133208_157148623_157148952_157167039_157167186_157174007_157174118_157180968_157181179_157184230_157184436_157189641_157189781_157190037_157190211_157196164_157196316_157198810_157198908_157200704_157201489_157203865_157203997_157206166
transcript_175134.known	chr6	+	576	2	FSM	ENSG00000049618.24	ENST00000637910.1	576	2	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAACATTTTTGTCAGACT	156779389	False	NA	NA	False	NA	NA	NA	156779399	156829730	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_156779472_156829226
transcript_175135.known	chr6	-	4322	4	FSM	ENSG00000215712.11	ENST00000400788.9	4322	4	0	0	0	0	multi-exon	FALSE	canonical	3	431	junction_1	23.1132477644796	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGATAAAGCTCATTCTT	-157319127	True	NA	NA	False	ATTAAA	-15	NA	157323519	157289024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_157293000_157318781_157318920_157322704_157322806_157323411
transcript_175143.known	chr6	+	1934	8	FSM	ENSG00000175048.17	ENST00000341375.12	1934	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	20.0702846649123	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGATCTGCGTACGGTT	157592719	True	NA	15	True	AATAAA	-17	NA	157592772	157673938	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_157592830_157592987_157593147_157628348_157628487_157632833_157632883_157645736_157645840_157647258_157647369_157653524_157653628_157672723
transcript_175146.known	chr6	+	3978	19	FSM	ENSG00000130340.17	ENST00000681651.1	3978	19	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	114.168234647248	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTAAATTCTCAAAGCACT	157817416	True	NA	6	True	AATAAA	-19	NA	157823221	157944505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_157823447_157867546_157867634_157873101_157873177_157875050_157875177_157876168_157876479_157896826_157896999_157901897_157902046_157906127_157906213_157909664_157909791_157909907_157910026_157921530_157921662_157927110_157927215_157928598_157928703_157932194_157932273_157935963_157936041_157937433_157937524_157938632_157938748_157940882_157940975_157942790
transcript_175149.known	chr6	+	3828	19	FSM	ENSG00000130340.17	ENST00000680863.1	3828	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	115.232722118822	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAAAGCACTTTTTCAAAA	157817355	True	NA	15	True	AATAAA	-28	NA	157823160	157944514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_157823447_157867546_157867634_157873101_157873177_157875050_157875177_157888570_157888661_157896826_157896999_157901897_157902046_157906127_157906213_157909664_157909791_157909907_157910026_157921530_157921662_157927110_157927215_157928598_157928703_157932194_157932273_157935963_157936041_157937433_157937524_157938632_157938748_157940882_157940975_157942790
transcript_175152.known	chr6	+	3448	18	FSM	ENSG00000130340.17	ENST00000681534.1	3448	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_17	86.2918921883131	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGGTCGTAATGGGAGT	157817415	True	NA	-9	True	AATAAA	-7	NA	157823220	157942733	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_157823447_157867546_157867634_157873101_157873177_157875050_157875177_157896826_157896999_157901897_157902046_157906127_157906213_157909664_157909791_157909907_157910026_157921530_157921662_157927110_157927215_157928598_157928703_157932194_157932273_157935963_157936041_157937433_157937524_157938632_157938748_157940882_157940975_157941239
transcript_175153.known	chr6	+	4216	18	FSM	ENSG00000130340.17	ENST00000392185.8	4216	18	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_6	29.883858229803	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGTCAGTATTTGGA	157817440	True	NA	NA	False	AATATA	-5	NA	157823245	157945077	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_157823447_157867546_157867634_157873101_157873177_157875050_157875177_157896826_157896999_157901897_157902046_157906127_157906213_157909664_157909791_157909907_157910026_157921530_157921662_157927110_157927215_157928598_157928703_157932194_157932273_157935963_157936041_157937433_157937524_157938632_157938748_157940882_157940975_157942790
transcript_175159.nic	chr6	+	1835	15	ISM	ENSG00000130340.17	ENST00000681534.1	3448	18	-87	5209	-27	4852	5prime_fragment	FALSE	canonical	3	289	junction_6	28.4841524145534	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCTGATCGTAGACATTT	157817328	True	NA	NA	False	TATAAA	-44	NA	157823133	157937524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_157823447_157867546_157867634_157873101_157873177_157875050_157875177_157896826_157896999_157901897_157902046_157906127_157906213_157909664_157909791_157909907_157910026_157921530_157921662_157927110_157927215_157928598_157928703_157932194_157932273_157935963_157936041_157937433
transcript_175165.nic	chr6	+	1047	7	ISM	ENSG00000130340.17	ENST00000680015.1	1484	9	-140	4146	-79	-4146	5prime_fragment	FALSE	canonical	3	289	junction_6	24.4500624857188	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCATCATTGTAAGTTTG	157823050	False	NA	NA	False	NA	NA	NA	157823081	157906201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_157823447_157867546_157867634_157873101_157873177_157875050_157875177_157896826_157896999_157901897_157902046_157906127
transcript_17517.nic	chr1	-	611	4	ISM	ENSG00000135823.14	ENST00000258301.6	4810	8	-58	20645	-58	-5645	5prime_fragment	FALSE	canonical	1	125	junction_2	135.907648382602	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGACAGGTGAGAAAACATC	-181012069	True	NA	NA	False	AAGAAA	-4	NA	181022928	180993369	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_180993426_181002605_181002701_181005293_181005464_181022638
transcript_175170.known	chr6	+	3634	18	FSM	ENSG00000130340.17	ENST00000680078.1	3634	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	88.6078800185632	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTACAGTAAATTCTCAAAG	157817416	True	NA	2	True	AATAAA	-15	NA	157823221	157944501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_157823447_157867546_157867634_157873101_157873177_157875050_157875177_157896826_157896999_157901927_157902046_157906127_157906213_157909664_157909791_157909907_157910026_157921530_157921662_157927110_157927215_157928598_157928703_157932194_157932273_157935963_157936041_157937433_157937524_157938632_157938748_157940882_157940975_157942790
transcript_175171.known	chr6	+	3434	18	FSM	ENSG00000130340.17	ENST00000681183.1	3434	18	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_17	85.6194606472296	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCGTAATGGGAGTGATAT	157817415	True	NA	-4	True	AATAAA	-12	NA	157823220	157942738	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_157823447_157867546_157867634_157873101_157873177_157875050_157875177_157896826_157896999_157901897_157902046_157906127_157906213_157909664_157909791_157909907_157910026_157921530_157921662_157927110_157927215_157928598_157928703_157932194_157932273_157935963_157936041_157937433_157937524_157938632_157938748_157940882_157940975_157941258
transcript_175175.known	chr6	+	3959	27	FSM	ENSG00000078269.15	ENST00000640338.1	3959	27	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_26	14.2617645820594	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCTTCGGCTTCACTCTT	157981226	False	NA	NA	False	NA	NA	NA	157981953	158094094	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_157982089_158017203_158017291_158028755_158029027_158033454_158033681_158043315_158043400_158054966_158055029_158059256_158059354_158061991_158062165_158063790_158063873_158064600_158064751_158064825_158064992_158066443_158066636_158068646_158068729_158069532_158069674_158071601_158071795_158074579_158074739_158076625_158076783_158078163_158078282_158081108_158081328_158081431_158081511_158083428_158083598_158084000_158084175_158086854_158086990_158088659_158088773_158089838_158089948_158092925_158093105_158093887
transcript_175177.known	chr6	+	7402	27	FSM	ENSG00000078269.15	ENST00000355585.9	7402	27	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_23	10.5645382036141	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTTTATTTCTTTTCAG	157981135	True	NA	33	True	ATTAAA	-21	NA	157981862	158099176	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_157982089_158017203_158017291_158028755_158029027_158033454_158033681_158043315_158043400_158054966_158055029_158059256_158059354_158061991_158062165_158063790_158063873_158064600_158064751_158064825_158064992_158066443_158066636_158068646_158068729_158069532_158069674_158071601_158071795_158074579_158074739_158076625_158076783_158078163_158078282_158081108_158081328_158081431_158081511_158083428_158083598_158084000_158084175_158086854_158086990_158088659_158088773_158089838_158089948_158092925_158093105_158095617
transcript_175182.nic	chr6	+	2991	12	ISM	ENSG00000078269.15	ENST00000640338.1	3959	27	-370	26563	-279	3659	5prime_fragment	TRUE	canonical	3	38	junction_7	11.7887746017799	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCGTTGACTCGGGCCTT	157981542	False	NA	-1	True	AATAAA	-15	NA	157981583	158067531	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_157982089_158017203_158017291_158028755_158029027_158033454_158033681_158043315_158043400_158054966_158055029_158059256_158059354_158061991_158062165_158063790_158063873_158064600_158064751_158064825_158064992_158066443
transcript_175184.known	chr6	+	939	4	FSM	ENSG00000078269.15	ENST00000367113.5	939	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	28.4057897071863	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGATCTCATTAAAAATG	157981310	False	NA	NA	False	AATAAA	-36	NA	157982037	158030937	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_157982089_158017203_158017291_158028755_158029027_158030407
transcript_17519.known	chr1	-	3649	2	FSM	ENSG00000179930.6	ENST00000339948.3	3649	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTACTCCTTTTCATTGT	-182061677	True	NA	NA	False	AATAAA	-17	NA	182061712	182054569	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_182058074_182061567
transcript_175191.known	chr6	-	3936	17	FSM	ENSG00000122335.17	ENST00000647468.2	3936	17	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	8.26490131520032	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTGTTTCATTGTACAA	-158166688	True	NA	-18	True	AATAAA	-15	NA	158168262	158109518	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_158111503_158113448_158113593_158114788_158114972_158116184_158116283_158117726_158117822_158119028_158119171_158120424_158120576_158128107_158128271_158130372_158130487_158143055_158143185_158144298_158144421_158146781_158146914_158148864_158148955_158150452_158150590_158155314_158155352_158158272_158158365_158168139
transcript_175196.known	chr6	-	2607	15	FSM	ENSG00000122335.17	ENST00000607071.6	2607	15	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_13	29.5891078966982	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTCAGATTCTCTTTGGC	-158166590	True	NA	NA	False	AGTAAA	-45	NA	158168164	158110598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_158111503_158113448_158113593_158114788_158114972_158116184_158116283_158117726_158117822_158119028_158119171_158120424_158120576_158128107_158128271_158143055_158143185_158144298_158144421_158146781_158146914_158148864_158148955_158150452_158150590_158158272_158158365_158168139
transcript_175198.known	chr6	-	2022	15	FSM	ENSG00000122335.17	ENST00000642903.1	2022	15	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_7	6.50274667242345	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCAAGCATTGTAATAATT	-158166706	True	NA	NA	False	NA	NA	NA	158168280	158114592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_158114972_158116184_158116283_158117726_158117822_158119028_158119171_158120424_158120576_158128107_158128271_158130372_158130487_158143055_158143185_158144298_158144421_158146781_158146914_158148864_158148955_158150452_158150590_158155314_158155352_158158272_158158365_158168139
transcript_175199.known	chr6	-	1993	14	FSM	ENSG00000122335.17	ENST00000646562.1	1993	14	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_12	23.1864069544123	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATAATGTTTTGCTTTTA	-158166656	True	NA	NA	False	NA	NA	NA	158168230	158114534	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_158114972_158116184_158116283_158117726_158117822_158119028_158119171_158120424_158120576_158128107_158128271_158130372_158130487_158143055_158143185_158144298_158144421_158146781_158146914_158148864_158148955_158150452_158150590_158158272_158158365_158168139
transcript_175205.known	chr6	+	7483	3	FSM	ENSG00000272047.4	ENST00000607778.2	7483	3	0	0	0	0	multi-exon	FALSE	canonical	3	643	junction_1	122.5	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTCACAGCCTGTTTT	158161866	True	NA	NA	False	AATAAA	-17	NA	158168349	158199344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_158168396_158170469_158170539_158191976
transcript_175206.nnic	chr6	+	802	3	NNC	ENSG00000272047.4	novel	2718	3	NA	NA	-17	4	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	435	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTCCTGCCTTTTTAA	158161849	True	NA	11	True	ATTAAA	-14	NA	158168332	158192414	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_158168628_158170469_158170539_158191976
transcript_175209.known	chr6	+	680	2	FSM	ENSG00000130338.13	ENST00000620026.1	680	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAATTTATTATTCCCC	158228936	True	NA	NA	False	AATGAA	-40	NA	158232235	158312662	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_158232304_158312050
transcript_17521.known	chr1	-	4719	8	FSM	ENSG00000135821.19	ENST00000311223.9	4719	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	626.222885273939	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACTTTGGATTTTGTTCA	-182392194	False	NA	NA	False	ACTAAA	-20	NA	182392206	182381704	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_182384724_182385356_182385557_182385759_182385888_182386255_182386403_182387130_182387293_182388571_182388751_182390496_182390853_182391678
transcript_175212.known	chr6	+	5390	17	FSM	ENSG00000146433.10	ENST00000367090.4	5390	17	0	0	0	0	multi-exon	TRUE	canonical	2	12	junction_1	26.0359577075628	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTATGTGTCTTGATTT	158536360	False	NA	8	True	AATAAA	-13	NA	158536435	158635428	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_158536866_158573419_158573524_158580939_158580996_158583953_158584045_158585303_158585426_158589671_158589783_158605266_158605348_158607243_158607344_158608332_158608464_158608658_158608751_158623549_158623608_158625103_158625207_158625702_158625755_158628407_158628491_158629729_158629820_158631322_158631390_158631809
transcript_175215.known	chr6	+	5103	17	FSM	ENSG00000146433.10	ENST00000684151.1	5103	17	0	0	0	0	multi-exon	FALSE	canonical	2	66	junction_14	17.7724330073291	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTATGTGTCTTGATTTG	158555878	True	NA	9	True	AATAAA	-14	NA	158560090	158635429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_158560233_158573419_158573524_158580939_158580996_158583953_158584045_158585303_158585426_158589671_158589783_158605266_158605348_158607243_158607344_158608332_158608464_158608658_158608751_158623549_158623608_158625103_158625207_158625702_158625755_158628407_158628491_158629729_158629820_158631322_158631390_158631809
transcript_175225.known	chr6	-	730	5	FSM	ENSG00000146425.11	ENST00000367089.8	730	5	0	0	0	0	multi-exon	FALSE	canonical	3	1444	junction_4	124.878691136639	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTTGTGTTCTTCATAG	-158631952	True	NA	-3	True	AATAAA	-16	NA	158644743	158636473	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_158636898_158637127_158637206_158637770_158637895_158641318_158641361_158644681
transcript_175226.nnic	chr6	-	700	4	NIC	ENSG00000146425.11	novel	730	5	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	119	junction_3	757.466977644717	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTTGTGTTCTTCATAG	-158631964	True	NA	-3	True	AATAAA	-16	NA	158644755	158636473	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_158636898_158637127_158637206_158637770_158637895_158644681
transcript_175234.known	chr6	-	3052	14	FSM	ENSG00000092820.19	ENST00000367075.4	3052	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	911.585886465103	1512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGCAGCACGGGTGTGTG	-158799896	True	NA	-9	True	AATAAA	-16	NA	158819368	158765747	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_158767079_158767260_158767513_158769325_158769419_158769783_158769945_158770763_158770895_158771243_158771408_158776407_158776505_158783519_158783667_158784643_158784728_158785308_158785584_158787107_158787204_158789287_158789372_158818081_158818167_158819316
transcript_17524.known	chr1	-	4065	7	FSM	ENSG00000135821.19	ENST00000417584.6	4065	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_6	519.042949411061	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACTTTGGATTTTGTTCA	-182391392	False	NA	NA	False	ACTAAA	-20	NA	182391404	182381704	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_182384724_182385356_182385557_182385759_182385888_182386255_182386403_182387130_182387293_182388571_182388751_182391174
transcript_17526.known	chr1	-	7554	7	FSM	ENSG00000135821.19	ENST00000331872.11	7554	7	0	0	0	0	multi-exon	FALSE	canonical	3	1285	junction_2	108.651839479239	2861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCTCTGTGACTCTGTT	-182385778	True	NA	NA	False	AATAAA	-14	NA	182391790	182378097	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_182384724_182385356_182385557_182385759_182385888_182386255_182386403_182387130_182387293_182388571_182388751_182391678
transcript_175269.nic	chr6	-	1326	10	ISM	ENSG00000092820.19	ENST00000367075.4	3052	14	-216	5121	-216	-5121	5prime_fragment	FALSE	canonical	0	0	junction_6	1078.14305379409	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAGAAACCGTGGAGAGA	NA	False	NA	-41	True	AAGAAA	-2	NA	158819584	158770868	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_158770895_158771243_158771408_158776407_158776505_158783519_158783667_158784643_158784728_158785308_158785584_158787107_158787204_158789287_158789372_158818081_158818167_158819316
transcript_175280.nic	chr6	-	1025	7	ISM	ENSG00000092820.19	ENST00000367075.4	3052	14	-216	17786	-216	0	5prime_fragment	FALSE	canonical	0	0	junction_3	1317.19394505475	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAAGATGATAAGTGAGT	NA	False	NA	NA	False	NA	NA	NA	158819584	158783533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_158783667_158784643_158784728_158785308_158785584_158787107_158787204_158789287_158789372_158818081_158818167_158819316
transcript_175283.known	chr6	-	3068	13	FSM	ENSG00000092820.19	ENST00000337147.11	3068	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	943.400155907697	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACGGGTGTGTGCTTGTGT	-158798755	False	NA	-2	True	AATAAA	-23	NA	158818227	158765740	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_158767079_158767260_158767513_158769325_158769419_158769783_158769945_158770763_158770895_158771243_158771408_158776407_158776505_158783519_158783667_158784643_158784728_158785308_158785584_158787107_158787204_158789287_158789372_158818081
transcript_175284.known	chr6	+	715	4	FSM	ENSG00000203711.15	ENST00000663950.1	715	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.29983164553722	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTATTGCTTTGCAAGGA	158869843	False	NA	NA	False	AATAAA	-16	NA	158869866	158910347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_158869966_158873527_158873622_158895225_158895367_158909966
transcript_175285.known	chr6	+	944	4	FSM	ENSG00000203711.15	ENST00000367073.7	1034	4	88	2	48	0	multi-exon	FALSE	canonical	2	3	junction_2	2.05480466765633	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCTTTGCAAGGAAGCT	158869842	True	NA	NA	False	AATAAA	-20	NA	158869986	158910351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_158870311_158873527_158873622_158895225_158895367_158909966
transcript_175286.known	chr6	+	1020	4	FSM	ENSG00000203711.15	ENST00000658761.1	1020	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.29983164553722	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTATTGCTTTGCAAGGA	158869765	True	NA	NA	False	AATAAA	-16	NA	158869909	158910347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_158870311_158873529_158873622_158895220_158895367_158909966
transcript_175291.known	chr6	-	2352	12	FSM	ENSG00000120438.12	ENST00000321394.12	2352	12	0	0	0	0	multi-exon	FALSE	canonical	3	2281	junction_11	147.993131401929	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGCCTATCTTACCTCG	-159758509	True	NA	-32	True	AATAAA	-23	NA	159789602	159778497	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_159779262_159779626_159779791_159779894_159780088_159780442_159780567_159780934_159781111_159783940_159784068_159784665_159784848_159785385_159785497_159785899_159785998_159787742_159787872_159788057_159788144_159789404
transcript_175298.known	chr6	-	1878	11	FSM	ENSG00000120438.12	ENST00000392168.6	1878	11	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_10	757.19910855732	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTATTACACATTAAAGTAA	-159758610	True	NA	-62	True	NA	NA	NA	159789703	159778986	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_159779262_159779626_159779791_159779894_159780088_159780442_159780567_159780934_159781111_159783940_159784068_159784665_159784848_159785385_159785497_159785899_159785998_159787742_159787872_159789404
transcript_175311.known	chr6	+	1520	9	FSM	ENSG00000120437.9	ENST00000367048.5	1520	9	0	0	0	0	multi-exon	FALSE	canonical	3	1585	junction_5	71.5453309098504	269	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGTAATTTAATAAGATCA	159749925	True	NA	-26	True	NA	NA	NA	159762044	159779112	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_159762143_159762918_159763054_159767004_159767187_159768510_159768629_159775169_159775314_159776149_159776273_159777301_159777457_159778169_159778281_159778658
transcript_175326.known	chr6	+	3656	8	FSM	ENSG00000146457.16	ENST00000358372.8	3656	8	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_6	183.214717348419	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTTTTTTGTTTTGTTT	NA	False	NA	16	True	AATAAA	-23	NA	159725584	159756319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_159727334_159736257_159736296_159738989_159739046_159742087_159742147_159743664_159743793_159748190_159748370_159753459_159753615_159755027
transcript_175327.known	chr6	+	2105	8	FSM	ENSG00000146457.16	ENST00000621533.5	2105	8	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_6	161.111699115355	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTTTTTTGTTTTGTTT	159718128	True	NA	16	True	AATAAA	-23	NA	159727505	159756319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_159727704_159736257_159736296_159738989_159739046_159742087_159742147_159743664_159743793_159748190_159748370_159753459_159753615_159755027
transcript_175330.known	chr6	+	1623	7	FSM	ENSG00000146457.16	ENST00000614346.4	1623	7	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_6	181.217180936761	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATAGTTGGTTTTTTTTTT	159726976	False	NA	10	True	ATTAAA	-15	NA	159726997	159749416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_159727334_159736257_159736296_159738989_159739046_159742087_159742147_159743664_159743793_159748190_159748370_159748589
transcript_175331.known	chr6	+	1430	7	FSM	ENSG00000146457.16	ENST00000631126.2	1430	7	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_6	145.438895149208	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTTTTTTTTTTTTTTT	159718188	True	NA	15	True	ATTAAA	-20	NA	159727565	159749421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_159727704_159736257_159736296_159738989_159739046_159742087_159742147_159743664_159743793_159748190_159748370_159748589
transcript_175338.known	chr6	+	3280	8	FSM	ENSG00000146457.16	ENST00000650096.1	3280	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	194.223624532472	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTTTTGGTTTTTTTTTG	159726974	False	NA	NA	False	NA	NA	NA	159726995	159755713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_159727334_159736257_159736296_159738989_159739046_159742087_159742147_159743664_159743793_159748190_159750011_159753459_159753615_159755027
transcript_175339.known	chr6	+	1622	6	FSM	ENSG00000146457.16	ENST00000337387.4	1622	6	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_1	49.4246901861812	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATAGTTGGTTTTTTTTT	159718210	False	NA	9	True	ATTAAA	-14	NA	159727587	159749415	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_159727704_159736257_159736296_159738989_159739046_159742087_159742147_159743664_159743793_159748190
transcript_175342.known	chr6	-	990	6	FSM	ENSG00000112096.19	ENST00000367055.8	990	6	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	154.234107771271	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATTTTCACTGAGTTTC	-159693194	False	NA	55	True	TTTAAA	-16	NA	159693234	159679063	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_159679299_159682473_159682639_159684853_159685034_159688125_159688243_159692660_159692864_159693144
transcript_175346.known	chr6	-	815	5	FSM	ENSG00000112096.19	ENST00000367054.6	815	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	228.45937822729	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCTGCATTATGCTTGC	-159693188	False	NA	3	True	AATAAA	-21	NA	159693228	159679115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_159679299_159682473_159682639_159684853_159685034_159692660_159692864_159693144
transcript_175347.known	chr6	-	14167	5	FSM	ENSG00000112096.19	ENST00000538183.7	14167	5	0	0	0	0	multi-exon	FALSE	canonical	3	523	junction_2	25.0349755342401	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTATTTACTTCTTGA	-159684757	True	NA	NA	False	AATAAA	-14	NA	159693241	159669068	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_159682639_159684853_159685034_159688125_159688243_159692660_159692864_159693144
transcript_175354.known	chr6	-	1718	2	FSM	ENSG00000285427.1	ENST00000535372.1	1718	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGACATATTGAAACCAAA	-159762273	True	NA	-12	True	AATAAA	-26	NA	159762332	159760257	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_159761637_159761993
transcript_175355.nic	chr6	+	1133	5	NIC	ENSG00000112110.10	novel	1075	4	NA	NA	33	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	519.52935431985	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGGTTATATGACATT	159789594	False	NA	20	True	AATAAA	-20	NA	159789844	159798429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_159790061_159790667_159790788_159790939_159791127_159797286_159797519_159798051
transcript_175357.known	chr6	+	758	4	FSM	ENSG00000112110.10	ENST00000476826.5	758	4	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	473.261027341149	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTTGGGCTTCAGAAGC	159789730	False	NA	-96	True	TTTAAA	-21	NA	159789811	159798313	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_159789889_159790939_159791127_159797286_159797519_159798051
transcript_175360.nnic	chr6	+	1036	4	NIC	ENSG00000112110.10	novel	758	4	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	3	210	junction_1	411.173929134618	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGGTTATATGACATT	159789571	True	NA	20	True	AATAAA	-20	NA	159789821	159798429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_159790061_159790939_159791127_159797286_159797519_159798051
transcript_175363.nnic	chr6	+	824	4	NNC	ENSG00000112110.10	novel	970	4	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_3	436.654961675183	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTCTGGTTATATGAC	159782316	True	NA	17	True	AATAAA	-17	NA	159790460	159798426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_159790640_159790939_159791127_159797286_159797370_159798051
transcript_175364.known	chr6	+	970	4	FSM	ENSG00000112110.10	ENST00000367034.5	970	4	0	0	0	0	multi-exon	FALSE	canonical	3	804	junction_1	133.386656004265	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGGTTATATGACATT	159782322	True	NA	20	True	AATAAA	-20	NA	159790466	159798429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_159790640_159790939_159791127_159797286_159797519_159798051
transcript_175366.known	chr6	+	1075	4	FSM	ENSG00000112110.10	ENST00000480842.1	1075	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	476.084026197057	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATATGACATTGTCTGAG	159782372	False	NA	27	True	AATAAA	-27	NA	159790516	159798436	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_159790788_159790939_159791127_159797286_159797519_159798051
transcript_175370.known	chr6	+	3234	11	FSM	ENSG00000146477.6	ENST00000275300.3	3234	11	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_5	4.40454310910905	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACATTTGCCCTTTCTCT	160348193	True	NA	6	True	ATTAAA	-19	NA	160348377	160452577	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_160348849_160397978_160398083_160407040_160407196_160408752_160408922_160410728_160410847_160436779_160436878_160436996_160437212_160442760_160442870_160443629_160443743_160447718_160447819_160450995
transcript_175373.nnic	chr6	+	3253	9	NIC	ENSG00000146477.6	novel	3234	11	NA	NA	-332	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	5.45435605731786	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACATTTGCCCTTTCTCT	160348035	False	NA	6	True	ATTAAA	-19	NA	160348045	160452577	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_160348849_160397978_160398083_160407040_160407196_160408752_160408922_160410728_160410847_160442760_160442870_160443629_160443743_160447718_160447819_160450995
transcript_175383.known	chr6	+	5445	27	FSM	ENSG00000085511.20	ENST00000366920.6	5445	27	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_15	25.899698428712	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTATATTGTCTTTTAA	160988626	True	NA	27	True	AATAAA	-20	NA	160991813	161117382	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_160992084_161034258_161034450_161048615_161049980_161070607_161070851_161073465_161073613_161080880_161081039_161084500_161084618_161086378_161086479_161086583_161086668_161087687_161087955_161089321_161089472_161091378_161091541_161092009_161092144_161092977_161093057_161093772_161093840_161097079_161097177_161098277_161098428_161101891_161101993_161102698_161102780_161106513_161106706_161107898_161107970_161108742_161108860_161109754_161109915_161111835_161111959_161112667_161112775_161115122_161115303_161116849
transcript_175385.known	chr6	+	5500	27	FSM	ENSG00000085511.20	ENST00000392142.9	5500	27	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_15	29.0169303772937	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGTTATATTGTCTTTT	160988581	True	NA	25	True	AATAAA	-18	NA	160991768	161117380	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_160992084_161034258_161034450_161048615_161049980_161070607_161070851_161073465_161073613_161080880_161081039_161084500_161084618_161086378_161086479_161086583_161086668_161087687_161087955_161089321_161089472_161091378_161091541_161092009_161092144_161092977_161093057_161093772_161093852_161097079_161097177_161098277_161098428_161101891_161101993_161102698_161102780_161106513_161106706_161107898_161107970_161108742_161108860_161109754_161109915_161111835_161111959_161112667_161112775_161115122_161115303_161116849
transcript_175393.known	chr6	-	2025	1	FSM	ENSG00000272841.1	ENST00000608721.1	2025	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCATTGTACTACGTATTC	-160992207	False	135	-5	True	AATAAA	-19	NA	160992342	160990317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_160990300_160992300
transcript_17540.known	chr1	-	939	5	FSM	ENSG00000135821.19	ENST00000463851.6	939	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	651.794973515445	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTATCACTGAAGCTTTT	-182385747	True	NA	71	True	NA	NA	NA	182391759	182384195	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_182384724_182385356_182385557_182385759_182385843_182388703_182388751_182391678
transcript_175400.known	chr6	-	7923	9	FSM	ENSG00000026652.15	ENST00000320285.9	7923	9	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_6	11.5913491449443	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACGTCTCTACACTGCCT	-161270533	True	NA	4	True	AATAAA	-28	NA	161274061	161129966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_161136635_161139421_161139621_161146523_161146600_161149186_161149290_161153345_161153500_161154148_161154311_161166247_161166418_161232035_161232303_161273937
transcript_175404.known	chr6	-	7705	8	FSM	ENSG00000026652.15	ENST00000366911.9	7705	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	30.5934500126002	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTGGAAAAATGCACGTC	-161270497	True	NA	-8	True	AATAAA	-16	NA	161274025	161129978	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_161136635_161139421_161139621_161146523_161146600_161149186_161149290_161153345_161153500_161154148_161154311_161232035_161232303_161273937
transcript_175409.known	chr6	-	6072	4	FSM	ENSG00000026652.15	ENST00000624499.2	6072	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	32.5371582450998	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGGGTGTGGTGGCAG	-161270435	True	NA	NA	False	AATACA	-29	NA	161273963	161160104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_161165714_161166247_161166418_161232035_161232303_161273937
transcript_175410.known	chr6	-	942	3	FSM	ENSG00000026652.15	ENST00000366905.3	942	3	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCAGACATCACCTCTGC	-161270504	True	NA	NA	False	NA	NA	NA	161274032	161165837	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_161166418_161232035_161232303_161273937
transcript_175411.known	chr6	+	1278	2	FSM	ENSG00000286498.1	ENST00000660049.1	1278	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTATGTGTATATCTCTA	NA	False	NA	NA	False	ATTAAA	-7	NA	161353678	161355350	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_161353777_161354170
transcript_175412.known	chr6	-	896	1	FSM	ENSG00000270419.1	ENST00000604200.1	896	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTGGCCATCGTGAGA	-163413861	True	NA	-3	True	ATTAAA	-22	NA	163413960	163413064	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_163413100_163414000
transcript_175413.nnic	chr6	+	2412	9	NNC	ENSG00000112531.17	novel	9384	8	NA	NA	-161	293	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	169.103333793276	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTTTATTTCATTAAATGA	163414405	True	NA	NA	False	TATAAA	-24	NA	163414481	163571745	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_163414796_163415156_163415336_163455278_163455422_163478779_163478897_163534981_163535126_163561981_163562070_163563419_163563720_163566720_163566796_163570693
transcript_175422.known	chr6	+	9384	8	FSM	ENSG00000112531.17	ENST00000361752.8	9384	8	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_7	50.9757845672325	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACTCTAGATTTCTAGAT	163410232	True	NA	11	True	ATTAAA	-20	NA	163414717	163578592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_163415336_163455278_163455422_163478779_163478897_163534981_163535126_163561981_163562070_163563419_163563720_163566720_163566796_163570693
transcript_175426.known	chr6	-	659	9	FSM	ENSG00000198818.10	ENST00000478705.5	659	9	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_8	550.561517339343	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTCCCCATAAAACACTC	-166325791	True	NA	NA	False	NA	NA	NA	166342576	166320155	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_166320257_166322856_166322887_166324536_166324596_166326131_166326168_166328275_166328358_166329506_166329590_166330160_166330248_166331384_166331408_166342418
transcript_175433.known	chr6	-	1033	8	FSM	ENSG00000198818.10	ENST00000361731.4	1033	8	0	0	0	0	multi-exon	FALSE	canonical	3	1303	junction_4	59.9615523073081	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTCTGAATCAAATTTA	-166325760	True	NA	-13	True	AATAAA	-20	NA	166342545	166319727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_166320257_166322856_166322887_166324536_166324596_166326131_166326168_166328275_166328358_166329506_166329590_166330160_166330248_166342418
transcript_175436.known	chr6	-	2576	8	FSM	ENSG00000198818.10	ENST00000487841.5	2576	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_7	574.071601877007	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGCATTTTTAAGATTT	-166325762	True	NA	NA	False	ATTAAA	-20	NA	166342547	166319859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_166320257_166322856_166324596_166326131_166326168_166328275_166328358_166329506_166329590_166330160_166330248_166331384_166331408_166342418
transcript_175451.known	chr6	+	3871	2	FSM	ENSG00000286760.2	ENST00000659081.2	3910	2	39	0	20	0	multi-exon	FALSE	canonical	3	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAAATTATGTGGTGCTGA	166342566	True	NA	NA	False	AATAAA	-15	NA	166342664	166351466	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_166343148_166348078
transcript_175455.known	chr6	-	976	4	FSM	ENSG00000060762.19	ENST00000341756.10	976	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	93.5746879354787	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTATGATTAAATATCTT	-166380024	True	NA	-35	True	AATAAA	-21	NA	166383013	166364918	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_166365454_166365973_166366107_166366794_166366895_166382805
transcript_17546.known	chr1	-	3942	7	FSM	ENSG00000135821.19	ENST00000339526.8	3942	7	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_6	518.674807134061	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTGATGTGTTTGTGA	-182385780	True	NA	-37	True	TATAAA	-17	NA	182391792	182382893	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_182384724_182385356_182385557_182385759_182385888_182386255_182386403_182387130_182387293_182388571_182388751_182390496
transcript_175460.known	chr6	-	5832	21	FSM	ENSG00000071242.12	ENST00000265678.9	5832	21	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_10	12.5517927006464	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGACTTTCTGTGTTG	-166624732	True	NA	2	True	AATAAA	-43	NA	166627251	166409363	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_166412888_166413793_166413932_166418224_166418343_166419881_166419959_166423255_166423418_166430452_166430612_166432400_166432491_166448723_166448850_166451102_166451234_166459448_166459552_166469840_166469906_166488832_166488922_166490670_166490742_166498507_166498651_166500886_166500925_166504505_166504613_166508202_166508283_166510276_166510358_166531231_166531314_166538667_166538785_166626920
transcript_175465.nnic	chr6	-	3888	20	NIC	ENSG00000071242.12	novel	5832	21	NA	NA	-41	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_19	25.6684593634714	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAATAAAGAA	-166624773	True	NA	-108	True	NA	NA	NA	166627292	166411231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_-_166412888_166413793_166413932_166418224_166418343_166419881_166419959_166423255_166423418_166430452_166430612_166432400_166432491_166448723_166448850_166451102_166451234_166459448_166459552_166469840_166469906_166488832_166488922_166490670_166490742_166498507_166498651_166500886_166500925_166504505_166504613_166508202_166508283_166510276_166510358_166531231_166531314_166626920
transcript_17547.known	chr1	-	4238	7	FSM	ENSG00000135828.11	ENST00000367559.7	4238	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	1.4142135623731	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTCTGATTTTCTTTAA	-182589198	True	NA	NA	False	AATAAA	-17	NA	182589256	182573633	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_182575579_182576255_182576390_182581224_182581358_182582052_182582259_182584080_182584167_182585326_182586971_182589166
transcript_175473.nic	chr6	-	2182	16	ISM	ENSG00000071242.12	ENST00000265678.9	5832	21	-41	20761	-41	9764	5prime_fragment	FALSE	canonical	3	84	junction_5	13.1260555131134	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCTGGGCATGATGGCAC	-166624773	True	NA	NA	False	ACTAAA	-23	NA	166627292	166430124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_166430612_166432400_166432491_166448723_166448850_166451102_166451234_166459448_166459552_166469840_166469906_166488832_166488922_166490670_166490742_166498507_166498651_166500886_166500925_166504505_166504613_166508202_166508283_166510276_166510358_166531231_166531314_166538667_166538785_166626920
transcript_17548.known	chr1	-	2408	5	FSM	ENSG00000143333.7	ENST00000367558.6	2408	5	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_3	19.536824204563	198	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTGTCTTCAAGTGCTG	-182603063	True	NA	-1	True	AATAAA	-19	NA	182604389	182598622	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_182600514_182601965_182602133_182602419_182602485_182603228_182603340_182604215
transcript_175480.nic	chr6	-	1759	11	ISM	ENSG00000071242.12	ENST00000265678.9	5832	21	-41	59963	-41	6399	5prime_fragment	FALSE	canonical	3	95	junction_1	9.82038695775273	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACAGTGCCGAGTTGTTGG	-166624773	True	NA	NA	False	TTTAAA	-16	NA	166627292	166469326	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_166469906_166488832_166488922_166490670_166490742_166498507_166498651_166500886_166500925_166504505_166504613_166508202_166508283_166510276_166510358_166531231_166531314_166538667_166538785_166626920
transcript_175484.known	chr6	-	1220	9	FSM	ENSG00000026297.17	ENST00000028008.9	1220	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	123.617100354279	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACAAACTGCAGCTTTCT	-166953295	True	NA	-50	True	AAAAAG	-10	NA	166956584	166929544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_166929792_166931043_166931119_166934090_166934137_166938894_166939009_166943018_166943090_166946681_166946740_166948565_166948626_166952487_166952549_166956096
transcript_175489.known	chr6	-	2234	8	FSM	ENSG00000026297.17	ENST00000611959.2	2234	8	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_6	90.4377111156443	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATAACCATATTGTCAGC	-166953312	True	NA	NA	False	NA	NA	NA	166956601	166928487	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_166929792_166931043_166931119_166934090_166934137_166938894_166939009_166943018_166943090_166946681_166946740_166952487_166952549_166956096
transcript_175493.known	chr6	-	1961	7	FSM	ENSG00000026297.17	ENST00000620173.5	1961	7	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_5	138.297987452216	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATTTAATCCTTAGAATA	-166953111	False	NA	NA	False	AATAGA	-37	NA	166956400	166928501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_166929792_166931043_166931119_166934090_166934137_166938894_166939009_166943018_166943090_166952487_166952549_166956096
transcript_175498.known	chr6	-	2536	5	FSM	ENSG00000026297.17	ENST00000683770.1	2536	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	160.922924097221	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGACAAGATCTGATTTG	-166953184	False	NA	NA	False	NA	NA	NA	166956473	166927867	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_166929792_166931043_166931119_166934090_166934137_166938894_166939009_166956096
transcript_175503.known	chr6	-	1417	10	FSM	ENSG00000026297.17	ENST00000366855.10	1417	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	171.566709481965	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTTATTTTGCTGTTT	-166953322	True	NA	-9	True	AAAACA	-14	NA	166956611	166929503	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_166929792_166931043_166931119_166934090_166934137_166938894_166939009_166943018_166943090_166946681_166946740_166948569_166948626_166952487_166952549_166955494_166955628_166956096
transcript_175509.known	chr6	+	13956	13	FSM	ENSG00000213066.13	ENST00000366847.9	13956	13	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_7	77.717928362051	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTGTCTGCGATCTTT	166993348	True	NA	NA	False	AATAAA	-19	NA	166999396	167052718	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_166999515_167000059_167000114_167003192_167003248_167003722_167003812_167004263_167004402_167010812_167010894_167013507_167013568_167022408_167022636_167024781_167024895_167026546_167026616_167032602_167032643_167033874_167033972_167039903
transcript_175517.known	chr6	+	1484	12	FSM	ENSG00000213066.13	ENST00000349556.4	1484	12	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_6	56.5738017223725	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTGTGTGTGTGGCTGC	166993359	True	NA	5	True	AATAAA	-18	NA	166999407	167040317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_166999515_167000059_167000114_167003192_167003248_167003722_167003812_167004263_167004402_167010812_167010894_167022408_167022636_167024781_167024895_167026546_167026616_167032602_167032643_167033874_167033972_167039903
transcript_175545.nnic	chr6	+	743	5	NNC	ENSG00000280707.3	novel	629	4	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	3	144	junction_2	308.109558436605	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGTTTGTTCTTTTTGT	167214578	True	NA	27	True	AATAAA	-16	NA	167228208	167237511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_167228398_167231204_167231308_167231859_167231958_167232478_167232561_167237240
transcript_17555.known	chr1	+	2543	13	FSM	ENSG00000135838.14	ENST00000367553.6	2543	13	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	8.42450130406674	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCTTTTGTGAAGTCA	182789062	True	NA	NA	False	AATAAA	-19	NA	182789772	182830384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_182789806_182792231_182792287_182794355_182794440_182803697_182803772_182806144_182806233_182812155_182812214_182814782_182814859_182816713_182816807_182818540_182818690_182818812_182818860_182822114_182822200_182825780_182825821_182828723
transcript_175551.known	chr6	+	674	4	FSM	ENSG00000280707.3	ENST00000625787.3	980	4	25	281	7	-281	multi-exon	FALSE	canonical	3	94	junction_3	498.442240050607	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGAGCTATTTTGCCGA	167214676	True	NA	NA	False	NA	NA	NA	167228306	167233645	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_167228398_167231859_167231958_167232478_167232561_167233242
transcript_175553.nnic	chr6	+	570	4	FSM	ENSG00000280707.3	ENST00000685238.1	555	4	-26	11	-26	0	multi-exon	FALSE	canonical	3	109	junction_3	491.766882441942	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAACAGTACAGCATGTT	167214623	True	NA	2	True	ATTAAA	-7	NA	167228253	167233926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_167228398_167231859_167231958_167232478_167232561_167233680
transcript_175555.nnic	chr6	+	3395	4	NNC	ENSG00000280707.3	novel	629	4	NA	NA	11	1	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_3	516.294704817144	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGTTTGTTCTTTTTGTT	167214580	True	NA	28	True	AATAAA	-17	NA	167228210	167237512	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_167228398_167231859_167231958_167232478_167232561_167234484
transcript_175558.nic	chr6	+	638	4	FSM	ENSG00000280707.3	ENST00000691081.1	629	4	-15	6	11	0	multi-exon	FALSE	canonical	3	489	junction_3	328.232979587501	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGTTTGTTCTTTTTGT	167214580	True	NA	27	True	AATAAA	-16	NA	167228210	167237511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_167228398_167231859_167231958_167232478_167232561_167237240
transcript_175563.nnic	chr6	+	692	4	Fusion	ENSG00000228648.1_ENSG00000280707.3	novel	629	4	NA	NA	5	1531	multi-exon	FALSE	canonical	3	68	junction_3	544.252596584425	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCATATTAATTGAATTGG	167214600	True	NA	7	True	AATAAA	-17	NA	167228230	167247447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr6_+_167228398_167231859_167231958_167245786_167245834_167247067
transcript_175568.known	chr6	+	582	4	FSM	ENSG00000280707.3	ENST00000628362.2	582	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	357.98448135204	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGTTTGTTCTTTTTGT	167214669	True	NA	27	True	AATAAA	-16	NA	167228299	167237511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_167228398_167231826_167231958_167232478_167232561_167237240
transcript_17557.known	chr1	+	2144	13	FSM	ENSG00000135838.14	ENST00000488424.5	2144	13	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_12	12.0127247348616	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCTTTTGTGAAGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	182789292	182830384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_182789806_182792231_182792287_182794355_182794440_182803697_182803772_182806144_182806233_182812155_182812214_182814782_182814859_182816713_182816807_182818540_182818690_182818812_182818860_182822114_182822200_182825780_182825821_182829602
transcript_175571.nnic	chr6	+	3458	3	NNC	ENSG00000280707.3	novel	573	3	NA	NA	-134	1	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_2	637	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGTTTGTTCTTTTTGTT	167228036	False	NA	28	True	AATAAA	-17	NA	167228065	167237512	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr6_+_167228398_167231859_167231958_167234484
transcript_175573.known	chr6	+	403	3	FSM	ENSG00000280707.3	ENST00000626424.2	573	3	164	6	64	0	multi-exon	FALSE	canonical	3	226	junction_2	533.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGTTTGTTCTTTTTGT	167228296	False	NA	27	True	AATAAA	-16	NA	167228363	167237511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_167228398_167231859_167231958_167237240
transcript_175581.nic	chr6	+	2234	2	ISM	ENSG00000280707.3	ENST00000625787.3	980	4	-51	0	5	0	intron_retention	FALSE	canonical	3	1293	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAACAGTACAGCATGTT	167214600	True	NA	2	True	ATTAAA	-7	NA	167228230	167233926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_167228398_167231859
transcript_175586.known	chr6	-	1639	3	FSM	ENSG00000198221.11	ENST00000663809.2	1660	3	21	0	3	0	multi-exon	FALSE	canonical	1	1	junction_2	18.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAATAAATATGAGGACAGA	-167826351	True	NA	NA	False	AAAAAG	-16	NA	167826812	167823341	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_167824807_167825402_167825551_167826786
transcript_175587.known	chr6	-	4011	2	FSM	ENSG00000198221.11	ENST00000669546.3	4090	2	79	0	78	0	multi-exon	FALSE	canonical	3	38	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAAACCTCTTTTCTTTAT	-167826248	True	NA	NA	False	NA	NA	NA	167826709	167822102	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_167824807_167825402
transcript_175589.known	chr6	+	7806	34	FSM	ENSG00000130396.21	ENST00000683244.1	7806	34	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	63.5335677672953	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGTCAGGCAGTGGT	167821007	True	NA	29	True	ATTAAA	-17	NA	167826910	167972023	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_167827238_167864550_167864747_167870385_167870499_167872213_167872378_167875334_167875496_167880359_167880518_167889214_167889327_167890861_167891030_167893861_167893907_167896877_167896973_167898204_167898468_167902316_167902387_167907170_167907290_167911100_167911163_167911283_167911490_167913402_167913424_167914167_167914314_167914643_167914739_167915167_167915434_167917088_167917233_167918734_167918934_167922855_167922960_167925004_167925092_167943128_167943195_167943401_167943476_167943940_167944060_167946706_167946902_167947852_167947945_167948292_167948479_167951185_167952188_167962432_167962568_167965756_167966046_167969113_167969199_167969781
transcript_175599.known	chr6	-	2997	4	FSM	ENSG00000164488.12	ENST00000366795.4	2997	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	8.25967446224258	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTCCTCCCTGATTCCT	-168319664	True	NA	-4	True	AATAAA	-27	NA	168319777	168306903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_168309099_168310167_168310447_168311151_168311285_168319387
transcript_175600.known	chr6	+	3150	13	FSM	ENSG00000112562.20	ENST00000354536.9	3150	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	5.94593698811774	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTCTTTTTTTTTTCCAG	168440725	True	NA	9	True	AATAAA	-20	NA	168441150	168667994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_168441455_168509914_168510087_168526345_168526453_168527627_168527728_168543624_168543673_168547085_168547170_168549128_168549204_168598817_168599005_168608156_168608240_168650680_168650784_168652953_168653229_168664073_168664112_168666420
transcript_175601.known	chr6	+	3082	13	FSM	ENSG00000112562.20	ENST00000356284.7	3082	13	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_10	3.95811402901264	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTAGTCTTTTTTTTTTCC	168440758	True	NA	7	True	AATAAA	-18	NA	168441183	168667992	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_168441455_168509914_168510087_168526345_168526453_168527627_168527728_168543624_168543673_168547118_168547170_168549128_168549204_168598817_168599005_168608156_168608240_168650680_168650784_168652953_168653229_168664073_168664112_168666420
transcript_175602.known	chr6	-	5811	23	FSM	ENSG00000186340.17	ENST00000366787.7	5811	23	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_22	34.9877192150013	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTCTCCCTTTTTTAAAA	-169253628	False	NA	1	True	AATAAA	-27	NA	169254044	169215779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_169217830_169220197_169220338_169221429_169221528_169222196_169222469_169223247_169223476_169225144_169225380_169226179_169226299_169228121_169228282_169229571_169229680_169231979_169232199_169232663_169232817_169232889_169233018_169234733_169234908_169237169_169237347_169237624_169237796_169239598_169239696_169240451_169240593_169241761_169241959_169246196_169246282_169248416_169248974_169250732_169250807_169253723_169253897_169253989
transcript_175604.known	chr6	-	5635	22	FSM	ENSG00000186340.17	ENST00000676628.1	5635	22	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_12	53.6184978403685	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATGATCTCTCTCCCTT	-169253634	False	NA	-7	True	AATAAA	-19	NA	169254050	169215787	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_169217830_169220197_169220338_169221429_169221528_169222196_169222469_169223247_169223476_169225144_169225380_169226179_169226299_169228121_169228282_169229571_169229680_169231979_169232199_169232663_169232817_169232889_169233018_169237169_169237347_169237624_169237796_169239598_169239696_169240451_169240593_169241761_169241959_169246196_169246282_169248416_169248974_169250732_169250807_169253723_169253897_169253989
transcript_175605.nic	chr6	-	1439	6	ISM	ENSG00000186340.17	ENST00000677398.1	2927	15	-50	10615	-21	4574	5prime_fragment	FALSE	canonical	3	79	junction_5	43.2092582671816	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTCCTTGGTAAATCT	-169253655	False	NA	-14	True	AATAAA	-18	NA	169254071	169241490	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_-_169241959_169246196_169246282_169248416_169248974_169250732_169250807_169253723_169253897_169253989
transcript_175637.known	chr6	-	2176	14	FSM	ENSG00000184465.16	ENST00000647873.1	2176	14	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	54.8286194864771	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATATTTCCTATTGGTTTG	-169697052	True	NA	-7	True	AATAAA	-20	NA	169702054	169657761	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_169658047_169658275_169658359_169659085_169659208_169659450_169659519_169660662_169660767_169662303_169662425_169664165_169664287_169665485_169665557_169667135_169667188_169670568_169670694_169672254_169672397_169688816_169689013_169689126_169689309_169701550
transcript_175662.known	chr6	-	2991	6	FSM	ENSG00000184465.16	ENST00000650296.1	2991	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	44.3648509520769	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTGGGCCTTTCTGTTTT	-169697035	True	NA	NA	False	ATTAAA	-12	NA	169702037	169666917	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_169668777_169670568_169670694_169672254_169672397_169688816_169689013_169689126_169689309_169701550
transcript_175667.known	chr6	-	1589	12	FSM	ENSG00000130024.15	ENST00000366780.8	1589	12	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_9	40.0840027034137	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGAGCTTAAAATCTGCA	-169723916	False	NA	-11	True	AATAAA	-17	NA	169723931	169703904	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_169704089_169705132_169705322_169705615_169705725_169710235_169710392_169712385_169712540_169714732_169714843_169715707_169715858_169715954_169716089_169717822_169717901_169718787_169718919_169721004_169721112_169723844
transcript_175669.known	chr6	-	4395	9	FSM	ENSG00000130024.15	ENST00000612128.1	4395	9	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_6	12.9807549857472	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCTGTCATCTTTTGCA	-169723990	False	1106	0	True	AATAAA	-23	NA	169724005	169707027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_169710392_169712385_169712540_169714732_169714843_169715707_169715858_169715954_169716089_169717822_169717907_169718787_169718919_169721004_169721112_169723844
transcript_175671.known	chr6	+	2667	1	FSM	ENSG00000185127.6	ENST00000332290.3	2667	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTTAGTATTTCAGTAG	169698399	True	NA	14	True	AATAAA	-8	NA	169702189	169704856	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_169702200_169704900
transcript_175672.known	chr6	-	2078	1	FSM	ENSG00000184786.6	ENST00000628156.1	2078	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATGAGTTCCTGTTGTTG	NA	False	NA	-2	True	AATAAA	-19	NA	169751587	169749509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_169749500_169751600
transcript_175673.known	chr6	+	2003	18	FSM	ENSG00000130023.16	ENST00000366772.6	2003	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	29.5674702015179	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGAGTTGAGGGTCTGCT	169751331	True	NA	86	True	ATTAAA	-14	NA	169751621	169781584	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_169751664_169753863_169754033_169755282_169755423_169756337_169756440_169756718_169756809_169758967_169759066_169759837_169759975_169760641_169760757_169762428_169762532_169766637_169766668_169768102_169768172_169769539_169769714_169773318_169773403_169775269_169775347_169775939_169776066_169776333_169776412_169779181_169779296_169781329
transcript_175674.known	chr6	+	2160	18	FSM	ENSG00000130023.16	ENST00000366773.8	2160	18	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	16.2062826896212	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCCAGGGTCCAGGT	169751331	True	NA	102	True	ATTAAA	-30	NA	169751621	169781600	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_169751664_169753863_169754033_169755282_169755423_169756337_169756440_169756718_169756809_169758967_169759066_169759837_169759975_169760641_169760757_169762428_169762532_169766637_169766668_169768102_169768172_169769539_169769714_169773318_169773403_169775269_169775347_169775939_169776066_169776454_169776674_169779181_169779296_169781329
transcript_175686.known	chr6	+	1908	17	FSM	ENSG00000130023.16	ENST00000392095.8	1908	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	22.9455878111675	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCAGGATGCTTTTAAT	169751334	True	NA	22	True	AGTAAA	-20	NA	169751624	169781520	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_169751664_169755282_169755423_169756337_169756440_169756718_169756809_169758967_169759066_169759837_169759975_169760641_169760757_169762428_169762532_169766637_169766668_169768102_169768172_169769539_169769714_169773318_169773403_169775269_169775347_169775939_169776066_169776454_169776674_169779181_169779296_169781329
transcript_175687.known	chr6	+	2582	3	FSM	ENSG00000231690.4	ENST00000420557.3	2582	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-1	NA	169790056	169802873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_169790417_169795183_169795363_169800830
transcript_175688.known	chr6	+	5155	11	FSM	ENSG00000112584.14	ENST00000476287.4	5155	11	0	0	0	0	multi-exon	TRUE	canonical	3	131	junction_7	20.7451199080651	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTTTCACATTTCTCTG	170304521	True	NA	NA	False	AATAAA	-29	NA	170306757	170407067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_170306843_170317369_170319125_170323078_170323260_170330448_170330551_170348150_170348324_170358225_170358319_170388286_170388494_170391012_170391122_170395486_170395580_170404549_170404602_170404762
transcript_175699.known	chr6	-	3779	11	FSM	ENSG00000198719.9	ENST00000366756.4	3779	11	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	6.50845603810919	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAAGGCGTAGTTACTTG	NA	False	NA	-4	True	AATAAA	-16	NA	170291078	170282205	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_170282880_170282987_170283106_170283230_170284030_170284918_170285136_170285253_170285424_170285568_170285700_170286237_170286299_170288238_170288497_170288728_170288790_170289511_170289809_170290085
transcript_175705.known	chr6	-	891	6	FSM	ENSG00000008018.9	ENST00000262193.7	891	6	0	0	0	0	multi-exon	TRUE	canonical	3	4256	junction_4	414.830085697747	1630	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTTTGCTATAACTTGT	-170527144	True	NA	-15	True	ATTAAA	-17	NA	170553307	170535119	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_170535406_170537233_170537341_170543600_170543731_170546102_170546185_170549005_170549114_170553129
transcript_175715.known	chr6	+	1861	8	FSM	ENSG00000112592.15	ENST00000230354.10	1861	8	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	77.1730099800944	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTGTAAGAGTCATGTG	170550673	True	NA	24	True	AATAAA	-32	NA	170554378	170572870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_170554464_170556878_170557084_170561790_170562234_170564544_170564633_170566917_170567010_170569611_170569780_170571409_170571505_170572185
transcript_175718.nic	chr6	+	3585	7	NIC	ENSG00000112592.15	novel	1857	8	NA	NA	-31	0	intron_retention	FALSE	canonical	3	277	junction_5	33.1444649308984	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTGTTATACCTTGTA	170550565	True	NA	13	True	AATAAA	-21	NA	170554270	170572859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr6_+_170554464_170556881_170557084_170561790_170562234_170564544_170564633_170566917_170567010_170569611_170571505_170572185
transcript_175722.known	chr6	+	935	5	FSM	ENSG00000112592.15	ENST00000421512.5	935	5	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_1	36.3936807701557	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGGCACTGATTTTCAGT	170550596	True	NA	NA	False	NA	NA	NA	170554301	170566957	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_+_170554464_170556881_170557084_170561790_170562234_170564544_170564633_170566917
transcript_175725.nic	chr6	+	3043	3	ISM	ENSG00000112592.15	ENST00000421512.5	935	5	-31	2519	-31	2250	5prime_fragment	FALSE	canonical	3	295	junction_1	42.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAGCCTGGTTGAAATAA	170550565	True	NA	NA	False	AATAAA	-20	NA	170554270	170564438	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr6_+_170554464_170556881_170557084_170561790
transcript_175726.known	chr6	-	936	7	FSM	ENSG00000071994.11	ENST00000392090.6	936	7	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_6	212.247497040601	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCATCTTAAAGCCTTGAA	-170584568	False	NA	-47	True	NA	NA	NA	170584581	170577558	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_170577718_170578856_170578971_170580001_170580106_170583056_170583189_170583504_170583748_170584298_170584393_170584491
transcript_175732.known	chr6	-	900	6	FSM	ENSG00000071994.11	ENST00000545869.5	900	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	227.99421045281	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTGGAAGCAGGATGTA	-170565474	True	NA	-82	True	NA	NA	NA	170584605	170577593	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_170577718_170578856_170578971_170580001_170580106_170583056_170583189_170583504_170583624_170584298
transcript_175733.known	chr6	-	3355	6	FSM	ENSG00000071994.11	ENST00000541970.6	3355	6	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_1	82.1350108053807	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATTGGTGATAGTGTTT	-170565506	True	NA	NA	False	AAAAAG	-20	NA	170584637	170575294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_170577718_170578856_170578971_170580001_170580106_170583056_170583189_170583504_170583748_170584298
transcript_17574.known	chr1	+	4493	28	FSM	ENSG00000135829.17	ENST00000367549.4	4493	28	0	0	0	0	multi-exon	TRUE	canonical	3	773	junction_11	101.215832352418	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGGCTTCCTCCCATAT	182825464	True	NA	7	True	AATAAA	-21	NA	182839346	182887982	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_182839457_182842544_182842678_182843293_182843435_182852232_182852345_182853305_182853419_182854029_182854179_182856531_182856579_182858103_182858241_182858550_182858641_182858732_182858895_182859039_182859118_182859992_182860185_182866443_182866586_182866960_182867044_182872336_182872494_182874853_182874955_182876049_182876264_182876446_182876542_182876829_182876904_182878020_182878174_182879249_182879411_182880496_182880609_182881263_182881426_182881519_182881648_182883138_182883369_182883519_182883636_182884612_182884814_182887082
transcript_175741.known	chr6	-	710	6	FSM	ENSG00000071994.11	ENST00000544866.5	710	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	269.554150403959	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGTCTTTGACTATATA	-170584376	False	NA	-27	True	TTTAAA	-32	NA	170584389	170578506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_170578657_170578856_170578971_170580001_170580106_170583056_170583189_170583504_170583624_170584298
transcript_175742.known	chr6	-	1082	6	FSM	ENSG00000071994.11	ENST00000542896.5	1082	6	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	211.748341197753	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGGAGTCTTTACTGTT	-170565481	True	NA	-2	True	ATTAAA	-21	NA	170584612	170578481	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_170578657_170578856_170578971_170580001_170580106_170583056_170583189_170583504_170583748_170584298
transcript_175744.known	chr6	-	1118	5	FSM	ENSG00000071994.11	ENST00000167218.9	1118	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	280.792182939625	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACAGTGTCTACTTATTA	-170565514	True	NA	-1	True	AATAGA	-26	NA	170584645	170577435	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_170577718_170578856_170578971_170583056_170583189_170583504_170583748_170584298
transcript_175752.known	chr6	-	1114	5	FSM	ENSG00000071994.11	ENST00000537445.5	1114	5	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_4	289.060871617035	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGCTTTTATTTTGAGA	-170565484	True	NA	-17	True	AATAAA	-16	NA	170584615	170581744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_170582266_170583056_170583189_170583504_170583748_170584298_170584393_170584491
transcript_175756.known	chr6	-	1287	4	FSM	ENSG00000071994.11	ENST00000614056.4	1287	4	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	248.502626858461	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGTTGCTTTTATTTTG	-170565561	True	NA	-20	True	AATAAA	-13	NA	170584692	170581747	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_170582266_170583056_170583189_170583504_170583748_170584298
transcript_175757.known	chr6	-	1897	4	FSM	ENSG00000071994.11	ENST00000443345.2	1897	4	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	293.564681496637	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATGTAACAGTGTTAGT	-170565523	True	NA	-64	True	AATGAA	-1	NA	170584654	170581791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_170583189_170583504_170583748_170584298_170584393_170584491
transcript_175758.known	chr6	-	1164	4	FSM	ENSG00000071994.11	ENST00000544336.5	1164	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_3	292.22936197446	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTGCTTTTATTTTGA	-170565561	True	NA	-19	True	AATAAA	-14	NA	170584692	170581746	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_170582266_170583056_170583189_170583504_170583624_170584298
transcript_175761.known	chr6	-	2657	3	FSM	ENSG00000071994.11	ENST00000453163.6	2657	3	0	0	0	0	multi-exon	FALSE	canonical	3	668	junction_2	30.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCCTGGAGGTAGCTGT	-170565481	True	NA	NA	False	AATAAA	-21	NA	170584612	170581088	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_170583189_170583504_170583748_170584298
transcript_175762.known	chr6	-	582	3	FSM	ENSG00000071994.11	ENST00000544755.1	582	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	334.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTGGGTATCCAGATGGT	-170584408	False	NA	NA	False	NA	NA	NA	170584421	170582848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr6_-_170583189_170583504_170583624_170584298
transcript_17577.nic	chr1	+	4488	28	NIC	ENSG00000135829.17	novel	2531	9	NA	NA	-138	0	intron_retention	FALSE	canonical	3	68	junction_1	188.870391251138	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTTGCCGTGTAGTTTG	182825713	False	NA	12	True	AATAAA	-12	NA	182839595	182887747	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_182839936_182842544_182842678_182843293_182843435_182852232_182852345_182853305_182853419_182854029_182854179_182856531_182856579_182858103_182858241_182858550_182858641_182858732_182858895_182859039_182859118_182859992_182860185_182866443_182866586_182866960_182867044_182872336_182872494_182874853_182874955_182876049_182876264_182876446_182876542_182876829_182876904_182878020_182878174_182879249_182879411_182880496_182880609_182881263_182881426_182881519_182881648_182883138_182883369_182883519_182883636_182884612_182884814_182887082
transcript_175770.known	chr7	-	2091	3	FSM	ENSG00000242474.3	ENST00000665089.1	2091	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	12.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCTGAAGTTTTCTTTT	-148663	True	NA	-7	True	ATTAAA	-16	NA	149428	145935	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_147840_148531_148619_149328
transcript_175776.known	chr7	-	593	2	FSM	ENSG00000242474.3	ENST00000487884.2	593	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTCGTGAGTCCTTAAAG	-148673	True	NA	NA	False	NA	NA	NA	149438	148231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_148715_149328
transcript_175779.known	chr7	-	1201	3	FSM	ENSG00000242474.3	ENST00000659412.1	1201	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	17	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCATTTCAGGTATTA	-148701	False	NA	1	True	AATAAA	-17	NA	149466	144439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_145416_148531_148619_149328
transcript_175781.known	chr7	+	3176	10	FSM	ENSG00000177706.9	ENST00000313766.6	3176	10	0	0	0	0	multi-exon	TRUE	canonical	3	79	junction_5	10.9284993830549	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCCTGGTGTGTGGCTGCC	NA	False	NA	49	True	AATAAA	-43	NA	192570	260772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_193805_195553_195733_208897_208977_246414_246508_248314_248431_255848_256030_256653_256764_257004_257087_258645_258706_259730
transcript_175783.nic	chr7	-	1237	7	NIC	ENSG00000197461.13	novel	1308	7	NA	NA	-13	-26	combination_of_known_junctions	FALSE	canonical	2	2	junction_6	3.94405318873308	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAGAGAGAAAGAGAGA	-520216	False	NA	-7	True	NA	NA	NA	520309	498334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_498575_501115_501243_510808_510997_512350_512456_517393_517491_518938_519069_519959
transcript_175790.known	chr7	+	743	3	FSM	ENSG00000223855.3	ENST00000663680.2	754	3	0	11	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTCTCCATTTCTCGCA	522415	True	NA	11	True	AATAAA	-19	NA	522541	525233	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_522704_524079_524281_524853
transcript_175795.known	chr7	-	2007	11	FSM	ENSG00000188191.15	ENST00000360274.8	2007	11	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_10	143.477384977564	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGCCGCAGGTAGACCCCA	-712418	True	NA	NA	False	GGGGCT	-22	NA	712572	549749	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_550603_551388_551471_579255_579378_584507_584569_596145_596305_606192_606240_607390_607453_677228_677321_680555_680727_711328_711528_712413
transcript_175796.known	chr7	-	2553	11	FSM	ENSG00000188191.15	ENST00000406797.5	2553	11	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_10	150.460094377214	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTCCCGGCTCGGGAGG	NA	False	NA	-41	True	ATTAAA	-15	NA	713207	549197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_550603_551388_551471_579255_579378_584507_584569_596145_596305_606192_606240_607390_607453_677228_677321_680555_680727_711328_711528_713054
transcript_175797.known	chr7	-	2472	11	FSM	ENSG00000188191.15	ENST00000537384.6	2472	11	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_10	119.527779197976	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTCCCGGCTCGGGAGG	-723018	False	4263	-41	True	ATTAAA	-15	NA	727281	549197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_550603_551388_551471_579255_579378_584507_584569_596145_596305_606192_606240_607390_607453_677228_677321_680555_680727_711328_711528_727209
transcript_175798.nnic	chr7	-	2463	11	NNC	ENSG00000188191.15	novel	2553	11	NA	NA	52	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	151.917378861011	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTCCCGGCTCGGGAGG	-723335	True	NA	-41	True	ATTAAA	-15	NA	727598	549197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_550603_551388_551471_579255_579378_584507_584569_596145_596305_606192_606240_607390_607453_677228_677321_680555_680727_711328_711528_727535
transcript_175799.known	chr7	-	1917	11	FSM	ENSG00000188191.15	ENST00000403562.5	1917	11	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_10	51.2375838618489	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAGACCCCAGTAGGGGG	-723387	True	NA	NA	False	GGGGCT	-30	NA	727650	549741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_550603_551388_551471_579255_579378_584507_584569_596145_596305_606192_606240_607390_607453_677228_677321_680555_680727_711328_711528_727589
transcript_175832.known	chr7	-	2494	11	FSM	ENSG00000188191.15	ENST00000544935.5	2494	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	152.500524589262	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTCCCGGCTCGGGAGGC	-712921	False	NA	-40	True	ATTAAA	-16	NA	712940	549196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_550603_551388_551471_579255_579378_584507_584569_596145_596305_606192_606240_607390_607453_677228_677321_680555_680727_711328_711528_712847
transcript_175833.known	chr7	+	3412	13	FSM	ENSG00000164818.16	ENST00000297440.11	3412	13	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_1	44.2099630551003	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTGTATGCCTGACTT	722478	True	NA	14	True	ATTAAA	-15	NA	726698	786475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_727316_729662_729848_740818_740944_741346_741466_754588_754822_756781_756995_761752_761897_763805_763975_770470_770619_774047_774199_775005_775163_779952_780145_785516
transcript_175835.known	chr7	+	2350	13	FSM	ENSG00000164818.16	ENST00000440747.5	2350	13	0	0	0	0	multi-exon	FALSE	canonical	1	21	junction_1	111.714541975917	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAAGAAGCCAAAG	727182	False	NA	NA	False	NA	NA	NA	727254	786031	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_727316_729724_729848_740818_740944_741346_741466_754588_754822_756781_756995_761752_761897_763805_763975_770470_770619_774047_774199_775005_775163_779952_780145_785516
transcript_175837.nic	chr7	+	2868	12	ISM	ENSG00000164818.16	ENST00000297440.11	3412	13	347	5569	-173	922	5prime_fragment	FALSE	canonical	3	314	junction_1	46.1725115891077	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTGGGTACACATAGG	727035	False	NA	14	True	AATAAA	-15	NA	727045	780906	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_727316_729662_729848_740818_740944_741346_741466_754588_754822_756781_756995_761752_761897_763805_763975_770470_770619_774047_774199_775005_775163_779952
transcript_175843.nic	chr7	+	4429	23	NIC	ENSG00000164828.18	novel	4488	21	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	82	junction_8	154.4993781581	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATGGGATATAAACAGT	806849	True	NA	6	True	AATAAA	-19	NA	816583	874899	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_816674_832504_832602_838797_838987_841945_842131_843205_843233_843340_843521_848417_848616_849519_849604_849922_850034_851383_851483_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
transcript_175876.nic	chr7	+	4036	20	NIC	ENSG00000164828.18	novel	4062	20	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	106	junction_6	121.883055526093	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATGGGATATAAACAGT	806849	True	NA	6	True	AATAAA	-19	NA	816583	874899	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_816674_832504_832602_838797_838987_841945_842131_843205_843233_843340_843521_851383_851483_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
transcript_175882.nic	chr7	+	3943	19	NIC	ENSG00000164828.18	novel	3812	18	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	106	junction_5	129.630302908304	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATGGGATATAAACAGT	806845	True	NA	6	True	AATAAA	-19	NA	816579	874899	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_816674_838797_838987_841945_842131_843205_843233_843340_843521_851383_851483_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
transcript_175888.nic	chr7	+	3937	19	NIC	ENSG00000164828.18	novel	3868	18	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	150	junction_6	110.706443654679	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATGGGATATAAACAGT	806849	True	NA	6	True	AATAAA	-19	NA	816583	874899	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_816674_832504_832602_838797_838987_841945_842131_843205_843233_843340_843521_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
transcript_175890.nic	chr7	+	3934	19	NIC	ENSG00000164828.18	novel	3868	18	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	143	junction_8	123.807297497281	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATGGGATATAAACAGT	806849	True	NA	6	True	AATAAA	-19	NA	816583	874899	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_816674_832504_832602_838797_838987_841945_842131_843205_843233_843340_843521_851949_852044_852608_852668_852812_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
transcript_175896.known	chr7	+	3812	18	FSM	ENSG00000164828.18	ENST00000389574.7	3812	18	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_5	119.132707835105	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGGGATATAAACAGTCTA	806880	True	NA	9	True	AATAAA	-22	NA	816614	874902	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_816674_838797_838987_841945_842131_843205_843233_843340_843521_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
transcript_175905.known	chr7	+	3717	17	FSM	ENSG00000164828.18	ENST00000452783.6	3717	17	0	0	0	0	multi-exon	FALSE	canonical	2	61	junction_4	143.564445459173	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTTTTCTCAGTTTGT	806880	True	NA	27	True	AATAAA	-40	NA	816614	874920	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_816674_832504_832602_838797_838987_841945_842131_851949_852044_852608_852668_852812_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
transcript_175912.known	chr7	+	2090	9	FSM	ENSG00000239857.7	ENST00000265857.8	2090	9	0	0	0	0	multi-exon	FALSE	canonical	3	612	junction_1	37.1397277184419	192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCAACGCTGGTCCTTTC	870792	True	NA	8	True	AATAAA	-16	NA	876553	896436	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_876801_886055_886135_886568_886651_887369_887520_890927_891067_892277_892419_893739_893816_893898_893972_895333
transcript_175924.nic	chr7	+	2681	6	NIC	ENSG00000164828.18	novel	1309	7	NA	NA	0	1620	combination_of_known_junctions	FALSE	canonical	3	223	junction_1	96.873938703864	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAGACACAAAGAAGAAAAT	806908	True	NA	NA	False	AGTAAA	-28	NA	816642	845492	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_816674_832504_832602_838797_838987_841945_842131_843205_843233_843340
transcript_175925.nic	chr7	+	2798	6	NIC	ENSG00000164828.18	novel	1309	7	NA	NA	-31	1678	combination_of_known_junctions	FALSE	canonical	3	223	junction_1	96.873938703864	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACTTCCAGAAATTTCCC	806849	True	NA	NA	False	AATAAA	-36	NA	816583	845550	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_816674_832504_832602_838797_838987_841945_842131_843205_843233_843340
transcript_17594.nic	chr1	+	1952	16	ISM	ENSG00000135829.17	ENST00000367549.4	4493	28	-45	13068	-45	-1835	5prime_fragment	FALSE	canonical	3	773	junction_11	75.6918900690307	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGGATAAGGATGATG	NA	False	NA	NA	False	NA	NA	NA	182839301	182874914	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_182839457_182842544_182842678_182843293_182843435_182852232_182852345_182853305_182853419_182854029_182854179_182856531_182856579_182858103_182858241_182858550_182858641_182858732_182858895_182859039_182859118_182859992_182860185_182866443_182866586_182866960_182867044_182872336_182872494_182874853
transcript_175942.known	chr7	+	3868	18	FSM	ENSG00000164828.18	ENST00000425407.6	3868	18	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_5	100.465525426924	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTTTTCTCAGTTTGT	NA	False	NA	27	True	AATAAA	-40	NA	832504	874920	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_832602_838797_838987_841945_842131_843205_843233_843340_843521_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
transcript_175943.known	chr7	+	4010	19	FSM	ENSG00000164828.18	ENST00000401592.6	4010	19	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_5	115.202947600322	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCTGTTTCTGCCCCT	NA	False	NA	41	True	TATAAA	-20	NA	832475	874934	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_832602_838797_838987_841945_842131_843205_843233_843340_843521_851383_851483_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
transcript_175944.known	chr7	-	2118	11	FSM	ENSG00000105963.15	ENST00000611167.4	2118	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_10	8.17557337438788	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGTGTCCGAGGATGG	-945527	False	289	-2	True	AATAAA	-22	NA	945816	897900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_898950_899032_899262_899418_899491_900101_900165_900532_900617_904125_904273_905059_905173_919967_920051_926552_926645_935374_935506_945761
transcript_175945.known	chr7	-	2360	11	FSM	ENSG00000105963.15	ENST00000649206.1	2360	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	9.99049548320803	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTGTGTGTCCGAGGAT	-954408	True	NA	-4	True	AATAAA	-20	NA	954697	897902	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_898950_899032_899262_899418_899491_900101_900165_900532_900614_904125_904273_905059_905173_919967_920051_926552_926645_935374_935506_954395
transcript_175952.known	chr7	-	4839	3	FSM	ENSG00000240230.6	ENST00000344111.4	4839	3	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	10.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCAGAGCGTTTTCCAAG	-974228	True	NA	-4	True	ATTAAA	-17	NA	975549	964851	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_969457_973180_973293_975427
transcript_175958.known	chr7	-	714	2	FSM	ENSG00000240230.6	ENST00000466146.1	714	2	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTAACCAGAACTCACCAAC	-974228	True	NA	NA	False	AATAGA	-40	NA	975549	972700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_973293_975427
transcript_175965.known	chr7	-	2138	5	FSM	ENSG00000146540.15	ENST00000397098.8	2138	5	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_4	348.432561624197	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGTGGGTCCTGCTCTGTG	-1124952	True	NA	-28	True	AATAAA	-17	NA	1138247	997005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_997805_1000469_1000552_1009949_1010144_1127256_1127387_1137314
transcript_175966.known	chr7	-	1294	5	FSM	ENSG00000146540.15	ENST00000357429.10	1294	5	0	0	0	0	multi-exon	FALSE	canonical	3	536	junction_4	150.157209284137	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGTGCGTCCCCTGCCTGTG	-1124962	True	NA	-8	True	AATAAA	-37	NA	1138257	996985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_997805_1000469_1000552_1009949_1010144_1127256_1127387_1138188
transcript_175967.known	chr7	-	621	5	FSM	ENSG00000146540.15	ENST00000491163.1	621	5	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_4	339.416687126605	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTAGTGGGTTCAGCGC	-1124965	True	NA	NA	False	NA	NA	NA	1138260	997632	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_997805_1000469_1000552_1009949_1010144_1127256_1127387_1138217
transcript_175971.known	chr7	-	1147	4	FSM	ENSG00000146540.15	ENST00000412051.5	1147	4	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_3	384.299651603046	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCAGCAGCCGTGGGTC	-1027285	True	NA	-38	True	AATAAA	-7	NA	1028339	997015	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_997805_1000469_1000552_1009949_1010144_1028257
transcript_175978.known	chr7	-	2621	2	FSM	ENSG00000146540.15	ENST00000465681.1	2621	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGCACTGGCCACCAAAG	-1027298	True	NA	-22	True	AATAAA	-25	NA	1028352	1024501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_1027028_1028257
transcript_175979.known	chr7	+	534	2	FSM	ENSG00000164849.10	ENST00000481403.1	534	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGGTCGGGGCCAGAGCA	1044541	True	NA	NA	False	NA	NA	NA	1044604	1045816	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_1044659_1045336
transcript_175981.known	chr7	+	1883	2	FSM	ENSG00000164849.10	ENST00000444847.2	1883	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAGGATTTCTGACTGAA	1044482	True	NA	8	True	AATAAA	-14	NA	1044545	1059261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_1044659_1057491
transcript_175982.known	chr7	+	2778	2	FSM	ENSG00000164850.16	ENST00000297469.3	2778	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGAGGCTCTGTCTTGGGG	NA	False	NA	NA	False	AATAAA	-21	NA	1086875	1093815	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_1087245_1091406
transcript_175987.known	chr7	-	878	5	FSM	ENSG00000178381.12	ENST00000316495.8	878	5	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	17.4122801493658	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAGTTGTTCTCATTGCC	-1157951	True	NA	-4	True	AATAAA	-19	NA	1160196	1152906	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_1153225_1155452_1155585_1157655_1157751_1158157_1158258_1159963
transcript_175990.known	chr7	+	1939	4	FSM	ENSG00000229043.3	ENST00000662926.1	1939	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	26.5873821368124	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTCTACTACAAATAAAAAA	1159574	True	NA	-19	True	NA	NA	NA	1160431	1165607	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_1160624_1162961_1163218_1163451_1163496_1164160
transcript_175997.known	chr7	+	1714	3	FSM	ENSG00000229043.3	ENST00000423008.2	1714	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	12	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTAACATGGTGAAACCC	1159516	True	NA	-46	True	NA	NA	NA	1160373	1165580	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_1160624_1163451_1163496_1164160
transcript_176000.known	chr7	-	3096	17	FSM	ENSG00000164877.19	ENST00000297508.8	3096	17	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_10	5.88131309742986	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTACGTGCCTCCGTGTT	-1458685	True	NA	1	True	AATAAA	-24	NA	1459470	1434358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_1434673_1435100_1435148_1436741_1436857_1437534_1437609_1437889_1437981_1438096_1438221_1438288_1438354_1438839_1438996_1439924_1440086_1440590_1440685_1442191_1442485_1444651_1445429_1446712_1446829_1447574_1447766_1448619_1448762_1450239_1450289_1459183
transcript_17601.known	chr1	+	814	6	FSM	ENSG00000135829.17	ENST00000483416.1	814	6	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	302.299851141214	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAAGTACACCCAAGTGG	182838862	False	NA	33	True	AAGAAA	-14	NA	182839733	182854142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_182839936_182842544_182842678_182843293_182843435_182852232_182852345_182853305_182853419_182854029
transcript_176012.known	chr7	-	3026	1	FSM	ENSG00000273230.1	ENST00000609755.1	3026	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGTTACCGACATGCCTAG	-1467511	False	NA	-10	True	AATAAA	-16	NA	1467522	1464496	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_1464500_1467500
transcript_176013.known	chr7	-	6981	48	FSM	ENSG00000164880.16	ENST00000404767.8	6981	48	0	0	0	0	multi-exon	TRUE	canonical	1	135	junction_11	97.624672760285	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTCTCTGGTGTCCC	-1492398	True	NA	-1	True	AATGAA	-16	NA	1504389	1470276	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_1470693_1470845_1470956_1471132_1471225_1471570_1471642_1472272_1472387_1473071_1473185_1473565_1473694_1474167_1474361_1474704_1474839_1475947_1476072_1476228_1476456_1476569_1476658_1476793_1476919_1477549_1477674_1477752_1477937_1478365_1478507_1478725_1478886_1479429_1479685_1480316_1480442_1480834_1480934_1481341_1481489_1482545_1482708_1483741_1483854_1484002_1484171_1485097_1485203_1485289_1485470_1486624_1486775_1486921_1487102_1487319_1487450_1487759_1487958_1489343_1489405_1489590_1489683_1493009_1493107_1493753_1493912_1494815_1494894_1495432_1495554_1496155_1496265_1497137_1497315_1498411_1498554_1498706_1498853_1498974_1499162_1499254_1499361_1499472_1499633_1499883_1500022_1500169_1500367_1502900_1503192_1503902_1504002_1504322
transcript_176017.nic	chr7	-	3471	22	ISM	ENSG00000164880.16	ENST00000404767.8	6981	48	-24	15985	-24	-3984	5prime_fragment	FALSE	canonical	3	212	junction_21	27.4189798044117	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAAAAATAAAGAAGTAAAA	-1492422	True	NA	NA	False	AATAAA	-5	NA	1504413	1486261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_1486775_1486921_1487102_1487319_1487450_1487759_1487958_1489343_1489405_1489590_1489683_1493009_1493107_1493753_1493912_1494815_1494894_1495432_1495554_1496155_1496265_1497137_1497315_1498411_1498554_1498706_1498853_1498974_1499162_1499254_1499361_1499472_1499633_1499883_1500022_1500169_1500367_1502900_1503192_1503902_1504002_1504322
transcript_176024.known	chr7	-	6051	9	FSM	ENSG00000164855.16	ENST00000297477.10	6051	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.11102430216445	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTTTCTGTTTCTCTCT	-1556176	False	NA	-3	True	GATAAA	-26	NA	1556205	1542234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_1547182_1547741_1547940_1548518_1548689_1549853_1549946_1550122_1550199_1550304_1550396_1550816_1550983_1555265_1555485_1556113
transcript_176025.known	chr7	+	3380	3	FSM	ENSG00000198517.10	ENST00000343242.9	3380	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTCGTTGCGTAGCTGG	1529294	True	NA	24	True	AATAAA	-19	NA	1530701	1543043	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_1530899_1539148_1539229_1539940
transcript_176028.known	chr7	+	2666	5	FSM	ENSG00000230487.9	ENST00000437964.5	2666	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	7.82224392358101	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATCGCAGTCTGCGCCCGG	1569656	True	NA	NA	False	AATGAA	-14	NA	1570134	1586545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_1570280_1574714_1574864_1575786_1575889_1583161_1583270_1584383
transcript_176030.nnic	chr7	-	923	3	NNC	ENSG00000157778.9	novel	774	3	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	243.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCACTGTCCTCCTTAA	-1565566	True	NA	-2	True	ATTAAA	-21	NA	1570014	1567331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_1567851_1569123_1569361_1569847
transcript_176031.known	chr7	-	774	3	FSM	ENSG00000157778.9	ENST00000404674.7	774	3	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_2	184.5	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGAATGTGTATCCCAAAAT	-1565597	True	NA	-21	True	ATTAAA	-2	NA	1570045	1567350	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_1567851_1569123_1569361_1570008
transcript_176032.known	chr7	-	1007	3	FSM	ENSG00000157778.9	ENST00000252329.3	1007	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	246	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGGAGGGAGGAACTTTG	NA	False	NA	NA	False	NA	NA	NA	1571005	1567612	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_1567851_1569123_1569361_1570473
transcript_176033.known	chr7	-	1428	2	FSM	ENSG00000157778.9	ENST00000288607.3	1428	2	0	0	0	0	multi-exon	FALSE	canonical	3	498	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCACTGTCCTCCTTAA	-1565584	True	NA	-2	True	ATTAAA	-21	NA	1570032	1567331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_1567851_1569123
transcript_176034.known	chr7	+	588	4	FSM	ENSG00000230487.9	ENST00000651857.1	588	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	6.59966329107444	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGCAGTAGTTGTAGCC	1569663	True	NA	NA	False	AATAAA	-20	NA	1570141	1579485	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_1570280_1574714_1574864_1575786_1575889_1579286
transcript_176042.nnic	chr7	+	3870	3	FSM	ENSG00000225968.8	ENST00000691883.1	3272	3	-7	-591	-7	-46	multi-exon	FALSE	canonical	0	0	junction_1	5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTATGTCTACTTAAAAAA	1669830	True	NA	NA	False	AAAAAG	-30	NA	1670243	1747900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_1670355_1709090_1709253_1744303
transcript_176048.known	chr7	-	2695	19	FSM	ENSG00000002822.16	ENST00000265854.12	2695	19	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_18	22.9793922708109	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCCCACTCGCCCTGTGT	-2228532	False	4413	-7	True	AATAAA	-16	NA	2232945	1815794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_1816229_1898199_1898391_1936686_1936898_1957628_1957720_1980452_1980542_2002064_2002122_2014501_2014643_2069193_2069339_2149151_2149239_2213211_2213274_2215884_2216000_2216156_2216288_2217961_2218044_2219331_2219457_2222574_2222755_2225409_2225551_2229983_2230144_2230548_2230728_2232871
transcript_176049.known	chr7	-	2762	19	FSM	ENSG00000002822.16	ENST00000399654.6	2762	19	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_18	42.6992063418305	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCACTCGCCCTGTGTA	-2228561	False	NA	-6	True	AATAAA	-17	NA	2232974	1815793	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_1816229_1898199_1898391_1936686_1936898_1957628_1957720_1980452_1980542_2002064_2002122_2014501_2014643_2069193_2069339_2149151_2149239_2213211_2213274_2215884_2216000_2216156_2216288_2217961_2218044_2219331_2219457_2222574_2222755_2225409_2225551_2229983_2230144_2230548_2230765_2232871
transcript_176057.nic	chr7	-	2686	18	NIC	ENSG00000002822.16	novel	2695	19	NA	NA	-103	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_15	45.6123275997372	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCCCACTCGCCCTGTGT	-2228664	False	4413	-7	True	AATAAA	-16	NA	2233077	1815794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_1816229_1898199_1898391_1936686_1936898_1957628_1957720_1980452_1980542_2002064_2002122_2014501_2014643_2069193_2069339_2149151_2149239_2213211_2213274_2215884_2216000_2216156_2216288_2217961_2218044_2219331_2219457_2222574_2222755_2229983_2230144_2230548_2230728_2232871
transcript_176063.nnic	chr7	-	2650	18	NIC	ENSG00000002822.16	novel	2695	19	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_5	50.6707261774437	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCCCACTCGCCCTGTGT	-2228544	False	4413	-7	True	AATAAA	-16	NA	2232957	1815794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_1816229_1898199_1898391_1936686_1936898_1957628_1957720_1980452_1980542_2014501_2014643_2069193_2069339_2149151_2149239_2213211_2213274_2215884_2216000_2216156_2216288_2217961_2218044_2219331_2219457_2222574_2222755_2225409_2225551_2229983_2230144_2230548_2230728_2232871
transcript_176087.nnic	chr7	-	2516	4	NNC	ENSG00000122687.19	novel	2511	4	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_2	15.06283137026	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCAGTGATGTGGTGTG	-2237812	True	NA	-21	True	CATAAA	-14	NA	2242225	2234294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_2235565_2238014_2238938_2239417_2239677_2242161
transcript_176089.known	chr7	-	2511	4	FSM	ENSG00000122687.19	ENST00000486040.1	2511	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	70.6179077068196	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCAGTGATGTGGTGTG	-2237776	True	NA	-21	True	CATAAA	-14	NA	2242189	2234294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_2235565_2238014_2238938_2239417_2239708_2242161
transcript_17609.known	chr1	+	7929	28	FSM	ENSG00000135862.6	ENST00000258341.5	7929	28	0	0	0	0	multi-exon	FALSE	canonical	3	464	junction_2	77.236529450005	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGGTGTGGCCTGAGTG	183014843	True	NA	30	True	AATAAA	-24	NA	183023419	183145592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_183024135_183103327_183103633_183108275_183108407_183110487_183110655_183114530_183114720_183115519_183115638_183116576_183116676_183116766_183116904_183117319_183117443_183117533_183117724_183118033_183118147_183121722_183121945_183122062_183122252_183124630_183124877_183125396_183125551_183126119_183126263_183127225_183127405_183128593_183128751_183130343_183130550_183131298_183131379_183132399_183132538_183133405_183133551_183134659_183134810_183135041_183135157_183136385_183136586_183137668_183137828_183140403_183140504_183142533
transcript_176092.nnic	chr7	-	1693	3	NNC	ENSG00000122687.19	novel	1704	3	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_2	165	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCATGCTTTGAAGTTTT	-2237812	True	NA	-1	True	AATAAA	-29	NA	2242225	2234194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_2235565_2239417_2239677_2242161
transcript_176094.known	chr7	-	1819	3	FSM	ENSG00000122687.19	ENST00000467199.5	1819	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	178	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAATAAAATAATAGAGATT	-2237756	True	NA	-37	True	NA	NA	NA	2242169	2234230	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_2235565_2239417_2239708_2241974
transcript_176095.known	chr7	-	1704	3	FSM	ENSG00000122687.19	ENST00000242257.14	1704	3	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_2	105.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCATGCTTTGAAGTTTT	-2237792	True	NA	-1	True	AATAAA	-29	NA	2242205	2234194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_2235565_2239417_2239708_2242161
transcript_176099.nnic	chr7	-	1509	3	NNC	ENSG00000122687.19	novel	1704	3	NA	NA	-13	2	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	65	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGATGTGGTGTGTTTA	-2237805	True	NA	-17	True	CATAAA	-18	NA	2242218	2234290	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_2235565_2239529_2239708_2242161
transcript_176102.nnic	chr7	-	1595	3	NNC	ENSG00000122687.19	novel	1704	3	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_2	165	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAGTGATGTGGTGTGTT	-2237812	True	NA	-19	True	CATAAA	-16	NA	2242225	2234292	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_2235565_2239417_2239677_2242161
transcript_176107.nnic	chr7	-	1390	3	NNC	ENSG00000122687.19	novel	1704	3	NA	NA	-20	-203	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_2	165	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAAATTTCCATCTGGGG	-2237812	True	NA	NA	False	AAAAAG	-17	NA	2242225	2234497	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_2235565_2239417_2239677_2242161
transcript_176112.nnic	chr7	+	713	5	NIC	ENSG00000106268.16	novel	698	4	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	164	junction_1	441.356644336527	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	2234677	True	NA	15	True	AATAAA	-15	NA	2242221	2251145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_2242257_2242924_2242976_2244562_2244727_2249856_2250003_2250828
transcript_176114.known	chr7	+	712	5	FSM	ENSG00000106268.16	ENST00000397046.5	712	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	473.921604804001	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	2234714	True	NA	15	True	AATAAA	-15	NA	2242258	2251145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_2242293_2242924_2242976_2244562_2244727_2249856_2250003_2250828
transcript_176115.known	chr7	+	783	5	FSM	ENSG00000106268.16	ENST00000397048.5	783	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	514.536927732111	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	2234716	True	NA	15	True	AATAAA	-15	NA	2242260	2251145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_2242293_2242924_2243049_2244562_2244727_2249856_2250003_2250828
transcript_176117.known	chr7	+	658	4	FSM	ENSG00000106268.16	ENST00000356714.6	658	4	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_1	362.409528940212	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	2234681	True	NA	15	True	AATAAA	-15	NA	2242225	2251145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_2242257_2244562_2244727_2249856_2250003_2250828
transcript_176122.known	chr7	+	698	4	FSM	ENSG00000106268.16	ENST00000339737.6	698	4	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_1	391.033957036413	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	2235360	False	NA	15	True	AATAAA	-15	NA	2242904	2251145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_2242976_2244562_2244727_2249856_2250003_2250828
transcript_176123.known	chr7	+	771	4	FSM	ENSG00000106268.16	ENST00000343985.8	771	4	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	478.882263424135	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	2235360	False	NA	15	True	AATAAA	-15	NA	2242904	2251145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_2243049_2244562_2244727_2249856_2250003_2250828
transcript_176126.known	chr7	-	4704	11	FSM	ENSG00000106266.11	ENST00000222990.8	4704	11	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_10	16.5819178625393	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACGTGTATGAAAGTTG	-2311631	True	NA	NA	False	AATAAA	-20	NA	2314441	2251769	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_2255170_2256873_2257024_2257364_2257515_2257734_2257804_2263229_2263363_2264297_2264459_2269558_2269640_2271849_2271972_2275111_2275230_2278099_2278306_2314327
transcript_176128.nnic	chr7	-	1331	10	NIC	ENSG00000106266.11	novel	4704	11	NA	NA	22	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_6	50.542489153944	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCTCCCTGCGGCCGCAC	-2311609	True	NA	-42	True	NA	NA	NA	2314419	2255039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_2255170_2256873_2257024_2257364_2257515_2257734_2257804_2263229_2263363_2264297_2264459_2271849_2271972_2275111_2275230_2278099_2278306_2314327
transcript_17613.nic	chr1	+	4934	26	ISM	ENSG00000135862.6	ENST00000258341.5	7929	28	-218	7819	-218	-132	5prime_fragment	TRUE	canonical	3	464	junction_2	74.0276056616719	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGCTAAAGAGAAAACAAGA	183023187	False	NA	26	True	NA	NA	NA	183023201	183137773	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_183024135_183103327_183103633_183108275_183108407_183110487_183110655_183114530_183114720_183115519_183115638_183116576_183116676_183116766_183116904_183117319_183117443_183117533_183117724_183118033_183118147_183121722_183121945_183122062_183122252_183124630_183124877_183125396_183125551_183126119_183126263_183127225_183127405_183128593_183128751_183130343_183130550_183131298_183131379_183132399_183132538_183133405_183133551_183134659_183134810_183135041_183135157_183136385_183136586_183137668
transcript_176138.nic	chr7	+	3012	20	NIC	ENSG00000106263.19	novel	3096	19	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	738.010937618354	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGTCTTTCTCCTCTCTTT	2322380	True	NA	30	True	AATAAA	-20	NA	2354793	2380745	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_2355117_2355233_2355421_2360709_2360903_2362644_2362765_2363069_2363128_2363631_2363761_2364371_2364530_2366316_2366449_2366524_2366592_2366998_2367046_2369471_2369683_2371776_2371850_2372672_2372796_2374527_2374607_2375388_2375528_2376949_2377076_2378688_2378767_2379133_2379243_2379393_2379512_2380203
transcript_176139.nic	chr7	+	3088	20	NIC	ENSG00000106263.19	novel	2966	19	NA	NA	-184	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	764.927617744197	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGTCTTTCTCCTCTCTTT	2354629	False	NA	30	True	AATAAA	-20	NA	2354642	2380745	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_2355117_2355233_2355421_2360709_2360903_2362644_2362765_2363069_2363128_2363631_2363761_2364371_2364530_2366316_2366449_2366524_2366592_2366998_2367046_2369471_2369683_2371776_2371850_2372672_2372796_2374527_2374607_2375388_2375528_2376949_2377076_2378688_2378767_2379133_2379243_2379393_2379512_2380278
transcript_176144.nnic	chr7	+	2979	20	NNC	ENSG00000106263.19	novel	3096	19	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	763.690130195781	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGTCTTTCTCCTCTCTTT	2322380	True	NA	30	True	AATAAA	-20	NA	2354793	2380745	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_2355084_2355233_2355421_2360709_2360903_2362644_2362765_2363069_2363128_2363631_2363761_2364371_2364530_2366316_2366449_2366524_2366592_2366998_2367046_2369471_2369683_2371776_2371850_2372672_2372796_2374527_2374607_2375388_2375528_2376949_2377076_2378688_2378767_2379133_2379243_2379393_2379512_2380203
transcript_17615.nic	chr1	+	4233	23	ISM	ENSG00000135862.6	ENST00000258341.5	7929	28	-27	10873	-27	1181	5prime_fragment	FALSE	canonical	3	464	junction_2	71.4689437263163	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAGATTATGAGGACCT	183023308	False	NA	8	True	CATAAA	-41	NA	183023392	183134719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_183024135_183103327_183103633_183108275_183108407_183110487_183110655_183114530_183114720_183115519_183115638_183116576_183116676_183116766_183116904_183117319_183117443_183117533_183117724_183118033_183118147_183121722_183121945_183122062_183122252_183124630_183124877_183125396_183125551_183126119_183126263_183127225_183127405_183128593_183128751_183130343_183130550_183131298_183131379_183132399_183132538_183133405_183133551_183134659
transcript_176156.known	chr7	+	3096	19	FSM	ENSG00000106263.19	ENST00000360876.9	3096	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	621.017516800323	948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGTCTTTCTCCTCTCTTT	2322413	True	NA	30	True	AATAAA	-20	NA	2354826	2380745	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_2355421_2360709_2360903_2362644_2362765_2363069_2363128_2363631_2363761_2364371_2364530_2366316_2366449_2366524_2366592_2366998_2367046_2369471_2369683_2371776_2371850_2372672_2372796_2374527_2374607_2375388_2375528_2376949_2377076_2378688_2378767_2379133_2379243_2379393_2379512_2380203
transcript_17616.nic	chr1	+	4134	22	ISM	ENSG00000135862.6	ENST00000258341.5	7929	28	0	12054	0	0	5prime_fragment	FALSE	canonical	3	464	junction_2	66.3305814217397	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACACTGGAGGTATGGGG	183014843	True	NA	-3	True	NA	NA	NA	183023419	183133538	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_183024135_183103327_183103633_183108275_183108407_183110487_183110655_183114530_183114720_183115519_183115638_183116576_183116676_183116766_183116904_183117319_183117443_183117533_183117724_183118033_183118147_183121722_183121945_183122062_183122252_183124630_183124877_183125396_183125551_183126119_183126263_183127225_183127405_183128593_183128751_183130343_183130550_183131298_183131379_183132399_183132538_183133405
transcript_176182.known	chr7	+	2966	19	FSM	ENSG00000106263.19	ENST00000397011.2	2966	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	658.388035702013	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGTCTTTCTCCTCTCTTT	2322468	True	NA	30	True	AATAAA	-20	NA	2354881	2380745	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_2355421_2360709_2360903_2362644_2362765_2363069_2363128_2363631_2363761_2364371_2364530_2366316_2366449_2366524_2366592_2366998_2367046_2369471_2369683_2371776_2371850_2372672_2372796_2374527_2374607_2375388_2375528_2376949_2377076_2378688_2378767_2379133_2379243_2379393_2379512_2380278
transcript_176183.known	chr7	+	15979	2	FSM	ENSG00000136213.10	ENST00000258711.7	15979	2	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCGGGACTGAACAAAACC	2401699	True	NA	NA	False	AGTAAA	-17	NA	2403587	2448483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_2403646_2432562
transcript_176185.nnic	chr7	+	1609	2	NNC	ENSG00000136213.10	novel	15979	2	NA	NA	-38	686	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	0	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGAAGGGAATGCTGGAG	2401661	True	NA	28	True	AATATA	-22	NA	2403549	2434061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_2403660_2432562
transcript_176186.nnic	chr7	+	2164	2	NNC	ENSG00000136213.10	novel	15979	2	NA	NA	-38	1241	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	0	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTCGGGTGTGGTGGTGT	2401661	True	NA	NA	False	ACTAAA	-35	NA	2403549	2434616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_2403660_2432562
transcript_176187.known	chr7	+	921	2	FSM	ENSG00000136213.10	ENST00000432336.1	921	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCTTCGTGCGCCTGATC	2402210	False	NA	NA	False	NA	NA	NA	2404098	2433375	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_2404207_2432562
transcript_176188.known	chr7	+	15985	2	FSM	ENSG00000136213.10	ENST00000618655.2	15985	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCGGGACTGAACAAAACCC	2401722	True	NA	NA	False	AGTAAA	-18	NA	2403610	2448484	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_2403674_2432562
transcript_17619.nic	chr1	+	3338	17	ISM	ENSG00000135862.6	ENST00000258341.5	7929	28	12	18258	12	-1394	5prime_fragment	FALSE	canonical	3	464	junction_2	48.2645298718427	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTCTACAATCGGTCTT	183014855	True	NA	NA	False	AAGAAA	-2	NA	183023431	183127334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_183024135_183103327_183103633_183108275_183108407_183110487_183110655_183114530_183114720_183115519_183115638_183116576_183116676_183116766_183116904_183117319_183117443_183117533_183117724_183118033_183118147_183121722_183121945_183122062_183122252_183124630_183124877_183125396_183125551_183126119_183126263_183127225
transcript_176239.nnic	chr7	-	3121	14	NNC	ENSG00000106009.16	novel	2779	14	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_13	165.517906930921	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAATGGCATTGAAGT	-2550464	True	NA	-43	True	ATTAAA	-21	NA	2555491	2537880	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_2538765_2539178_2539352_2539543_2539643_2539785_2539889_2540978_2541053_2541297_2541485_2541717_2541837_2542119_2542212_2543203_2543324_2543589_2543963_2544908_2545057_2547323_2547479_2554304_2554448_2555040
transcript_176241.known	chr7	-	2779	14	FSM	ENSG00000106009.16	ENST00000340611.9	2779	14	0	0	0	0	multi-exon	TRUE	canonical	3	452	junction_13	75.0334836498949	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGTGTCATTCATTCGC	-2550497	True	NA	0	True	NA	NA	NA	2555524	2537809	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_2538765_2539178_2539352_2539543_2539643_2539785_2539889_2540978_2541053_2541297_2541485_2541717_2541837_2542119_2542212_2543203_2543324_2543589_2543963_2544908_2545057_2547323_2547479_2554304_2554448_2555486
transcript_17627.known	chr1	+	5398	23	FSM	ENSG00000058085.15	ENST00000264144.5	5398	23	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_22	8.57875523151897	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAAAACTCTAGCTGGG	183186217	False	NA	NA	False	CATAAA	-10	NA	183186263	183245127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_183186432_183207880_183208070_183215452_183215589_183218389_183218489_183220824_183220962_183222088_183222212_183223134_183223325_183225607_183225721_183226697_183226917_183227514_183227698_183228373_183228620_183230960_183231104_183232186_183232344_183232651_183232858_183234366_183234447_183235574_183235731_183236459_183236605_183237351_183237505_183238306_183238422_183239363_183239564_183240039_183240199_183240291_183240392_183243146
transcript_176315.known	chr7	-	5226	11	FSM	ENSG00000106009.16	ENST00000469750.5	5226	11	0	0	0	0	multi-exon	FALSE	canonical	3	452	junction_10	68.9702109609649	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAATGGCATTGAAGT	-2555672	False	NA	-43	True	ATTAAA	-21	NA	2555694	2537880	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_2538765_2539178_2539352_2539543_2539643_2539785_2541053_2541297_2541485_2541717_2541837_2542119_2543963_2544908_2545057_2547323_2547479_2554304_2554448_2555486
transcript_17632.known	chr1	+	4313	22	FSM	ENSG00000058085.15	ENST00000493293.5	4313	22	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_11	7.73131571146758	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAAATAAAAAAGAATCA	183186221	False	NA	NA	False	NA	NA	NA	183186237	183241261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_183186432_183207880_183208070_183215452_183215589_183218389_183218489_183220824_183220962_183222088_183222212_183223134_183223325_183225607_183225721_183226697_183226917_183227514_183227698_183228373_183228620_183230960_183231104_183232186_183232344_183232651_183232858_183234366_183234447_183235574_183235731_183236459_183236605_183237351_183237505_183238306_183238422_183239363_183239564_183240039_183240199_183240291
transcript_176328.known	chr7	+	6857	22	FSM	ENSG00000106012.18	ENST00000402050.7	6857	22	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_18	4.85620906056456	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGAGTGCCCCGTGAAGA	NA	False	NA	9	True	AATAAA	-19	NA	2558978	2614728	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_2559218_2567115_2567164_2568953_2569000_2571525_2571655_2572191_2572327_2573417_2573489_2578241_2578356_2578475_2578527_2582579_2582651_2583636_2583710_2584235_2584286_2586207_2586372_2587821_2587878_2589906_2590107_2593021_2593127_2594885_2594977_2598464_2598633_2601440_2601465_2604880_2604992_2605875_2605998_2607123_2607228_2610043
transcript_176331.known	chr7	+	2400	21	FSM	ENSG00000106012.18	ENST00000476665.5	2400	21	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_18	4.96462485994662	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTTCTACTTTGTTAAA	2558639	True	NA	NA	False	AGTAAA	-15	NA	2559078	2607555	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_2559218_2567115_2567164_2568953_2569000_2571525_2571655_2572191_2572327_2573417_2573489_2578241_2578356_2578475_2578527_2582579_2582651_2583636_2583710_2584235_2584286_2586207_2586372_2587821_2587878_2589906_2590107_2593021_2593127_2594885_2594977_2598464_2598633_2601440_2601465_2604880_2604992_2605875_2605998_2607123
transcript_176333.known	chr7	+	2170	21	FSM	ENSG00000106012.18	ENST00000438376.6	2170	21	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	5.16139516022558	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCCGTCACTGTCTCCAC	2558612	True	NA	NA	False	NA	NA	NA	2559051	2610162	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_2559218_2568953_2569000_2571525_2571655_2572191_2572327_2573417_2573489_2578241_2578356_2578475_2578527_2582579_2582651_2583636_2583710_2584235_2584286_2586207_2586372_2587821_2587878_2589906_2590107_2593021_2593127_2594885_2594977_2598464_2598633_2601440_2601465_2604880_2604992_2605875_2605998_2607123_2607228_2610043
transcript_176338.known	chr7	+	2289	20	FSM	ENSG00000106012.18	ENST00000611775.4	2289	20	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	5.28521693079292	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACTTTGTTAAAGTCCAAA	2558709	True	NA	NA	False	AGTAAA	-22	NA	2559148	2607562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_2559218_2568953_2569000_2571525_2571655_2572191_2572327_2573417_2573489_2578241_2578356_2578475_2578527_2582579_2582651_2583636_2583710_2584235_2584286_2586207_2586372_2587821_2587878_2589906_2590107_2593021_2593127_2594885_2594977_2598464_2598633_2601440_2601465_2604880_2604992_2605875_2605998_2607123
transcript_176339.known	chr7	+	2235	20	FSM	ENSG00000106012.18	ENST00000325997.13	2235	20	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	5.06249038164676	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCTGCGTCGTGTCTCTT	2558617	True	NA	NA	False	NA	NA	NA	2559056	2610278	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_2559218_2571525_2571655_2572191_2572327_2573417_2573489_2578241_2578356_2578475_2578527_2582579_2582651_2583636_2583710_2584235_2584286_2586207_2586372_2587821_2587878_2589906_2590107_2593021_2593127_2594885_2594977_2598464_2598633_2601440_2601465_2604880_2604992_2605875_2605998_2607123_2607228_2610043
transcript_176345.known	chr7	+	6775	20	FSM	ENSG00000106012.18	ENST00000623361.3	6775	20	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_1	5.06249038164676	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCCCCGTGAAGACTTCT	NA	False	NA	14	True	AATAAA	-24	NA	2558971	2614733	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_2559218_2571525_2571655_2572191_2572327_2573417_2573489_2578241_2578356_2578475_2578527_2582579_2582651_2583636_2583710_2584235_2584286_2586207_2586372_2587821_2587878_2589906_2590107_2593021_2593127_2594885_2594977_2598464_2598633_2601440_2601465_2604880_2604992_2605875_2605998_2607123_2607228_2610043
transcript_176349.nnic	chr7	-	896	3	FSM	ENSG00000289352.1	ENST00000690042.1	905	3	33	-24	33	24	multi-exon	FALSE	canonical	1	1	junction_2	0.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATCTTGACAGTTTCAC	-2622154	True	NA	NA	False	AATACA	-40	NA	2622203	2614558	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_2614977_2617649_2617802_2621877
transcript_176353.nic	chr7	+	4969	15	NIC	ENSG00000136295.15	novel	4805	14	NA	NA	-63	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_13	456.565556237937	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTTCCTGAGCTGCT	2622723	True	NA	18	True	AATAAA	-14	NA	2631922	2664802	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_2632279_2646852_2647023_2647141_2647254_2647417_2647639_2647958_2648055_2649566_2649640_2649912_2649989_2652186_2652243_2652917_2653011_2656091_2656185_2656397_2656535_2658285_2658460_2658939_2659016_2659939_2660041_2661667
transcript_176360.nnic	chr7	+	4783	15	NNC	ENSG00000136295.15	novel	4805	14	NA	NA	-62	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	355.15111040864	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTTCCTGAGCTGCT	2622724	True	NA	18	True	AATAAA	-14	NA	2631923	2664802	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_2632039_2632122_2632279_2646852_2647023_2647141_2647254_2647417_2647639_2647958_2648055_2649566_2649640_2649912_2649989_2652186_2652243_2652917_2653011_2656091_2656185_2656397_2656535_2658285_2658460_2658939_2659016_2661667
transcript_176365.known	chr7	+	4805	14	FSM	ENSG00000136295.15	ENST00000258796.12	4805	14	0	0	0	0	multi-exon	FALSE	canonical	3	1133	junction_5	102.710600502681	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTTCCTGAGCTGCT	2622786	True	NA	18	True	AATAAA	-14	NA	2631985	2664802	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_2632279_2646852_2647023_2647141_2647254_2647417_2647639_2647958_2648055_2649566_2649640_2649912_2649989_2652186_2652243_2652917_2653011_2656091_2656185_2656397_2656535_2658285_2658460_2658939_2659016_2661667
transcript_176372.known	chr7	+	4537	13	FSM	ENSG00000136295.15	ENST00000407643.5	4537	13	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_4	336.136907871381	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTCTCTTCCTGAGCTG	2622956	False	NA	16	True	AATAAA	-12	NA	2632155	2664800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_2632279_2646852_2647023_2647141_2647254_2647417_2647639_2649566_2649640_2649912_2649989_2652186_2652243_2652917_2653011_2656091_2656185_2656397_2656535_2658285_2658460_2658939_2659016_2661667
transcript_176383.known	chr7	-	4369	4	FSM	ENSG00000146535.14	ENST00000275364.8	4369	4	0	0	0	0	multi-exon	FALSE	canonical	3	688	junction_1	36.7453700787218	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTGCCAGTATTCAAAACC	-2835558	True	NA	NA	False	AATAAA	-28	NA	2844308	2728104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_2731751_2733450_2733502_2794927_2795144_2843852
transcript_176385.known	chr7	+	8615	7	FSM	ENSG00000174945.14	ENST00000683327.1	8615	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	1.29099444873581	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTTGAGATG	2688098	True	NA	NA	False	AATAAA	-16	NA	2688201	2719683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_2688297_2700233_2700756_2702721_2702890_2708587_2708717_2709074_2709245_2709639_2709817_2712329
transcript_176387.known	chr7	+	1862	6	FSM	ENSG00000174945.14	ENST00000407112.1	1862	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.01980390271856	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAAGTGGTTCATGCCTGT	2688098	True	NA	NA	False	ATTAAA	-12	NA	2688201	2713100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_2688297_2700233_2700756_2702721_2702890_2708587_2708717_2709639_2709817_2712329
transcript_176389.nic	chr7	-	4432	26	NIC	ENSG00000198286.10	novel	4287	25	NA	NA	-87	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_24	30.2297866350393	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCGACCCTTTGTTTGT	-3043943	False	NA	-13	True	ATTAAA	-18	NA	3043954	2906141	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_2906843_2910049_2910166_2912171_2912297_2913286_2913467_2915236_2915373_2917289_2917386_2918490_2918588_2919371_2919613_2922633_2922761_2923131_2923334_2924232_2924366_2926738_2926792_2928597_2928696_2929991_2930075_2932534_2932587_2934452_2934630_2937036_2937235_2937906_2938033_2938678_2938832_2939748_2939929_2944211_2944538_2945818_2945957_2947574_2947788_2958499_2958632_2980519_2980581_3043666
transcript_176392.known	chr7	-	4287	25	FSM	ENSG00000198286.10	ENST00000396946.9	4287	25	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_13	15.9756759550957	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCGACCCTTTGTTTGT	-3042254	True	NA	-13	True	ATTAAA	-18	NA	3043867	2906141	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_2906843_2910049_2910166_2912171_2912297_2913286_2913467_2915236_2915373_2917289_2917386_2918490_2918588_2919371_2919613_2922633_2922761_2923131_2923334_2924232_2924366_2926738_2926792_2928597_2928699_2929991_2930075_2932534_2932587_2934452_2934630_2937036_2937235_2937906_2938033_2938678_2938832_2939748_2939929_2944211_2944538_2945818_2945957_2947574_2947788_2958499_2958632_3043666
transcript_17640.known	chr1	-	5441	11	FSM	ENSG00000157064.11	ENST00000287713.7	5441	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_8	3.95474398665704	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTGTCTTGGTCAAGA	-183417362	True	NA	1	True	AATAAA	-19	NA	183418380	183248236	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_183252744_183261001_183261070_183261201_183261304_183278552_183278630_183283994_183284040_183284709_183284791_183286661_183286789_183290127_183290207_183292789_183292858_183293704_183293794_183418182
transcript_176408.known	chr7	+	5529	17	FSM	ENSG00000242802.9	ENST00000649063.2	5529	17	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_7	11.5101857065818	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGGGTCCACACTGCCT	4772305	True	NA	17	True	AATAAA	-17	NA	4775622	4794397	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_4775757_4781174_4781313_4781567_4781755_4783315_4783461_4783688_4783799_4784202_4784372_4784907_4785049_4785414_4785453_4785521_4785685_4786249_4786429_4787633_4787777_4788153_4788295_4788839_4788952_4789831_4789930_4790458_4790592_4790672_4790888_4791114
transcript_176425.nic	chr7	+	3424	16	NIC	ENSG00000242802.9	novel	5743	17	NA	NA	-5	0	intron_retention	TRUE	canonical	3	102	junction_7	10.6408019747887	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGCGTCTGTATGAAGA	4772292	True	NA	13	True	AGTAAA	-15	NA	4775609	4791750	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_4775757_4781174_4781313_4781567_4781755_4783315_4783461_4783688_4783799_4784202_4784372_4784907_4785049_4785414_4785453_4785521_4785685_4786249_4786429_4787633_4787777_4788153_4788295_4788839_4788952_4789831_4790592_4790672_4790888_4791114
transcript_176434.known	chr7	+	2667	16	FSM	ENSG00000242802.9	ENST00000647984.1	2667	16	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	31.7571339316941	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCAAGAAGAGCTGCAGTA	4772297	True	NA	-23	True	NA	NA	NA	4775614	4791714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_4775757_4781174_4781313_4783315_4783461_4783688_4783799_4784202_4784372_4784907_4785049_4785414_4785453_4785521_4785685_4786249_4786429_4787633_4787777_4788153_4788295_4788839_4788952_4789831_4789930_4790458_4790592_4790672_4790888_4791114
transcript_176449.known	chr7	-	5736	15	FSM	ENSG00000157927.17	ENST00000399583.4	5736	15	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_6	7.17315004950078	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACACTTCTTATGGGTGTT	-4883294	True	NA	NA	False	NA	NA	NA	4883716	4797054	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_4799484_4799629_4799770_4800170_4800311_4801652_4801996_4803545_4803755_4805565_4805717_4815277_4815451_4816227_4816466_4817238_4817352_4822393_4822555_4832140_4832179_4834606_4835240_4836357_4836606_4877604_4878204_4883595
transcript_176461.nic	chr7	+	2389	7	NIC	ENSG00000196204.12	novel	807	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	92.9798365238399	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTAGTCTGTGTCATCAA	4970001	True	NA	15	True	ATTAAA	-18	NA	4973987	4998167	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_4974162_4976300_4976437_4983670_4983774_4984909_4985076_4989033_4989178_4995474_4995583_4996609
transcript_176462.nic	chr7	+	2360	7	NIC	ENSG00000196204.12	novel	807	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	86.9418707464297	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTAGTCTGTGTCATCAA	4970001	True	NA	15	True	ATTAAA	-18	NA	4973987	4998167	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_4974162_4976300_4976437_4983670_4983774_4984909_4985076_4989062_4989178_4995474_4995583_4996609
transcript_176467.nic	chr7	+	2279	6	NIC	ENSG00000196204.12	novel	2201	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	96.8846737105514	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAACCTAGTCTGTGTCATC	4970001	True	NA	13	True	ATTAAA	-16	NA	4973987	4998165	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_4974162_4976300_4976437_4983670_4983774_4984909_4985076_4989033_4989178_4996609
transcript_176468.known	chr7	+	2201	6	FSM	ENSG00000196204.12	ENST00000404006.5	2201	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	81.2910819216967	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAACCTAGTCTGTGTCATC	4970050	True	NA	13	True	ATTAAA	-16	NA	4974036	4998165	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_4974162_4976300_4976437_4983670_4983774_4984909_4985076_4989062_4989178_4996609
transcript_176473.nic	chr7	+	2198	6	NIC	ENSG00000196204.12	novel	2201	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	81.2910819216967	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAACCTAGTCTGTGTCATC	4970001	True	NA	13	True	ATTAAA	-16	NA	4973987	4998165	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_4974162_4976300_4976437_4983670_4983774_4984961_4985076_4989062_4989178_4996609
transcript_176474.known	chr7	+	4125	6	FSM	ENSG00000146587.18	ENST00000353796.7	4125	6	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_1	23.5423023512995	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACGAAAAAGAATATAAATCT	5044132	True	NA	NA	False	AGTAAA	-10	NA	5045820	5067257	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_5045959_5046254_5046397_5048032_5048092_5057294_5057422_5057683_5057780_5063694
transcript_176475.nic	chr7	+	625	5	ISM	ENSG00000196204.12	ENST00000404006.5	2201	6	-49	9057	0	-260	5prime_fragment	FALSE	canonical	0	0	junction_3	89.9235786654424	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAGTGGAAAAAGGAAAAAG	4970001	True	NA	NA	False	ATTAAA	-26	NA	4973987	4989108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_4974162_4976300_4976437_4983670_4983774_4984909_4985076_4989062
transcript_176476.known	chr7	+	1360	5	FSM	ENSG00000196204.12	ENST00000403969.5	1360	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	103.025482284724	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAGTTCACAGTGAACAA	4970063	True	NA	NA	False	NA	NA	NA	4974049	4997452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_4974162_4976300_4976437_4983670_4983774_4984909_4985076_4996609
transcript_176480.known	chr7	+	6612	5	FSM	ENSG00000146587.18	ENST00000396912.2	6612	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	13.5185058345958	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATTGTTTTTTGCATTTC	5044171	True	NA	NA	False	AATAAA	-35	NA	5045859	5069487	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_5046397_5048032_5048092_5057294_5057422_5057683_5057780_5063694
transcript_176486.known	chr7	+	514	3	FSM	ENSG00000273313.1	ENST00000498308.1	514	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	4.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCTGTTTCCTTTTGGGA	5072104	True	NA	5	True	AATAAA	-18	NA	5072124	5073223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_5072201_5072361_5072498_5072921
transcript_176487.known	chr7	+	451	4	FSM	ENSG00000288620.1	ENST00000674911.1	451	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	87.2251238017019	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGCAAACTATGTTGGT	4976359	True	NA	NA	False	AAGAAA	-40	NA	4976369	4989177	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_4976437_4983670_4983774_4984909_4985076_4989062
transcript_17650.known	chr1	+	5970	24	FSM	ENSG00000116698.22	ENST00000367537.7	5970	24	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	82.3660280145186	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTATCGATTCTTTCT	183466131	True	NA	14	True	ATTAAA	-21	NA	183472477	183554193	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_183472650_183502252_183502392_183512836_183512869_183515873_183515992_183517687_183517821_183526595_183526768_183527955_183528028_183528891_183529043_183529397_183529534_183533163_183533327_183533675_183533833_183537144_183537216_183538379_183538441_183540983_183541104_183542075_183542365_183544352_183544498_183544929_183545313_183545965_183546338_183547102_183547253_183549207_183549289_183549763_183549924_183550750_183550922_183551044_183551191_183551817
transcript_176502.known	chr7	+	1663	13	FSM	ENSG00000157954.15	ENST00000404704.7	1663	13	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	98.0383640894386	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCTGAGGAAATACATCATT	5186263	True	NA	-27	True	ATTAAA	-38	NA	5190245	5231104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_5190494_5193117_5193172_5199575_5199659_5214534_5214705_5216562_5216660_5217089_5217188_5217921_5218015_5222601_5222673_5225822_5225931_5227179_5227345_5228103_5228212_5229607_5229706_5230834
transcript_176506.known	chr7	+	4445	13	FSM	ENSG00000157954.15	ENST00000288828.9	4445	13	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	87.7798698766155	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGATTTTTATTCAGTTCT	5186250	True	NA	8	True	AATAAA	-34	NA	5190232	5233840	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_5190494_5193117_5193172_5199575_5199659_5214534_5214705_5216562_5216660_5217089_5217188_5217921_5218015_5222601_5222673_5225822_5225931_5227179_5227345_5228103_5228212_5229607_5229739_5230834
transcript_176512.known	chr7	+	1700	13	FSM	ENSG00000157954.15	ENST00000466014.5	1700	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	119.666086349568	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGACCTGTGACCTCTGA	5186276	True	NA	NA	False	NA	NA	NA	5190258	5230947	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_5190494_5193117_5193346_5199575_5199659_5214534_5214705_5216562_5216660_5217089_5217188_5217921_5218015_5222601_5222673_5225822_5225931_5227179_5227345_5228103_5228212_5229607_5229739_5230834
transcript_176527.known	chr7	+	1948	12	FSM	ENSG00000157954.15	ENST00000382384.6	1948	12	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_11	80.6398994817687	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGACCATTTTCCCTCCG	5186290	True	NA	-15	True	NA	NA	NA	5190272	5231470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_5190494_5199575_5199659_5214534_5214705_5216562_5216660_5217089_5217188_5217921_5218015_5222601_5222673_5225822_5225931_5227179_5227345_5228103_5228212_5229607_5229706_5230834
transcript_176531.known	chr7	+	2112	12	FSM	ENSG00000157954.15	ENST00000401525.7	2112	12	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	63.6893286078005	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGCTCTGGGATTTCTTCC	5186213	True	NA	15	True	ATTAAA	-16	NA	5190195	5231524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_5190494_5199575_5199659_5214534_5214705_5216562_5216660_5217089_5217188_5217921_5218015_5222601_5222673_5225822_5225931_5227179_5227345_5228103_5228212_5229607_5229739_5230834
transcript_176548.nnic	chr7	+	2244	11	NIC	ENSG00000157954.15	novel	4445	13	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_1	112.477064328689	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTTCCTGTTGAAAAACT	5186197	True	NA	9	True	ATTAAA	-20	NA	5190179	5231723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_5190494_5214534_5214705_5216562_5216660_5217089_5217188_5217921_5218015_5222601_5222673_5225822_5225931_5227179_5227345_5228103_5228212_5229607_5229739_5230834
transcript_176558.known	chr7	+	2839	11	FSM	ENSG00000164638.11	ENST00000297195.8	2839	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	18.1537874836079	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCCGCCTGCAAGCAGAGT	5282325	True	NA	28	True	ATTAAA	-22	NA	5282968	5304060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_5283083_5287805_5287986_5290731_5290864_5291123_5291238_5291692_5291822_5294859_5294935_5296935_5297199_5298987_5299127_5299239_5299428_5300421_5300663_5302796
transcript_176561.known	chr7	+	2734	11	FSM	ENSG00000164638.11	ENST00000406453.3	2734	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	21.0940749974963	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCCGCCTGCAAGCAGAGT	5282385	True	NA	28	True	ATTAAA	-22	NA	5283028	5304060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_5283083_5287808_5287986_5290731_5290864_5291123_5291238_5291729_5291822_5294864_5294935_5296935_5297199_5298987_5299127_5299239_5299428_5300421_5300663_5302796
transcript_176566.known	chr7	-	2651	1	FSM	ENSG00000234432.4	ENST00000610122.1	2651	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTGTTTTTTCTACTCC	NA	False	NA	NA	False	ATTAAA	-16	NA	5428927	5426276	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_5426300_5428900
transcript_176569.known	chr7	-	8270	5	FSM	ENSG00000155034.20	ENST00000382368.8	8270	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	10.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCGGCTGTGTGGTCCTTCC	-5510961	True	NA	0	True	AATAAA	-23	NA	5513809	5475796	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_5481932_5491230_5491450_5500487_5502032_5505411_5505631_5513656
transcript_176575.nic	chr7	-	3152	5	NIC	ENSG00000155034.20	novel	2686	3	NA	NA	18	0	intron_retention	FALSE	canonical	2	7	junction_1	25.1445819213603	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTGTCCTCACGGCTCT	-5510943	True	NA	0	True	AATAAA	-20	NA	5513791	5489177	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_5490213_5491230_5491450_5500487_5502032_5505411_5505631_5513656
transcript_176576.nnic	chr7	-	3041	4	NNC	ENSG00000155034.20	novel	2526	7	NA	NA	0	-8896	intron_retention	FALSE	non_canonical	0	0	junction_1	30.092450142113	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAGAAAAAAAATTAC	-5510961	True	NA	NA	False	AGTAAA	-3	NA	5513809	5498073	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_5498537_5499825_5502032_5505411_5505631_5513656
transcript_176577.nic	chr7	-	3518	3	ISM	ENSG00000155034.20	ENST00000382368.8	8270	5	0	23089	0	-9708	5prime_fragment	FALSE	canonical	3	55	junction_1	7.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCCAAAATGGGTTTGGG	-5510961	True	NA	-10	True	AATAAA	-16	NA	5513809	5498885	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_5502032_5505411_5505631_5513656
transcript_176585.known	chr7	-	1845	7	FSM	ENSG00000075624.17	ENST00000425660.5	1845	7	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_4	13718.430522476	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAGGCCAAGTGTGA	-4934653	True	NA	-13	True	AATAAA	-13	NA	5530601	5527155	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_5527892_5528003_5528186_5528280_5528720_5529018_5529060_5529160_5529401_5529534_5529664_5530523
transcript_176600.known	chr7	-	1812	6	FSM	ENSG00000075624.17	ENST00000646664.1	1812	6	0	0	0	0	multi-exon	FALSE	canonical	3	26475	junction_5	1574.97801889423	44696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAAGTGTGACTTTGTGG	-4934653	True	NA	-5	True	AATAAA	-21	NA	5530601	5527147	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_5527892_5528003_5528186_5528280_5528720_5529160_5529401_5529534_5529664_5530523
transcript_176602.known	chr7	-	1495	6	FSM	ENSG00000075624.17	ENST00000493945.6	1495	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	12125.1253288368	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTTGATTGCACATTGT	-4934654	True	NA	-48	True	NA	NA	NA	5530602	5527535	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_5527892_5528003_5528186_5528280_5528720_5529160_5529401_5529534_5529734_5530523
transcript_176616.known	chr7	-	1300	5	FSM	ENSG00000075624.17	ENST00000432588.6	1300	5	0	0	0	0	multi-exon	FALSE	canonical	3	26475	junction_4	1595.48848319253	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGTATGACGAGTCCGGC	-5530562	False	NA	NA	False	NA	NA	NA	5530627	5527797	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_5528186_5528280_5528720_5529160_5529401_5529534_5529664_5530523
transcript_176624.known	chr7	-	1687	5	FSM	ENSG00000075624.17	ENST00000473257.3	1687	5	0	0	0	0	multi-exon	FALSE	canonical	1	247	junction_4	13034.1741395456	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAGTGTGACTTTGTGGT	-4934656	True	NA	-4	True	AATAAA	-22	NA	5530604	5527146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_5527892_5528003_5528186_5528280_5528720_5529160_5529401_5530523
transcript_176626.known	chr7	-	2271	5	FSM	ENSG00000075624.17	ENST00000477812.2	2271	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	12742.1444697311	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGCCAAGTGTGACTTT	-5530525	False	NA	-9	True	AATAAA	-17	NA	5530590	5527151	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_5527892_5528003_5528186_5528280_5529060_5529160_5529664_5530523
transcript_176628.known	chr7	-	2245	5	FSM	ENSG00000075624.17	ENST00000462494.5	2245	5	0	0	0	0	multi-exon	FALSE	canonical	3	26475	junction_4	1755.59681803653	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAGGCCAAGTGTGA	-4934653	True	NA	-13	True	AATAAA	-13	NA	5530601	5527155	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_5527892_5528003_5528186_5528280_5529401_5529534_5529664_5530523
transcript_176641.known	chr7	-	811	3	FSM	ENSG00000075624.17	ENST00000676319.1	811	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13237.5	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAGTGTGACTTTGTGGT	-4934656	True	NA	-4	True	AATAAA	-22	NA	5530604	5527146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_5527784_5529570_5529664_5530523
transcript_176645.known	chr7	-	2021	5	FSM	ENSG00000075624.17	ENST00000642480.2	2021	5	0	0	0	0	multi-exon	FALSE	canonical	3	29792	junction_3	386.355082793018	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAGTGTGACTTTGTGGT	-5529884	False	NA	-4	True	AATAAA	-22	NA	5529949	5527146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_5527892_5528003_5528186_5528280_5528720_5529160_5529401_5529534
transcript_176650.nnic	chr7	+	2672	6	NNC	ENSG00000075618.18	novel	2784	5	NA	NA	-68	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	532.222284388769	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCAGGCCGGCCTGTGTG	NA	False	NA	26	True	AATAAA	-16	NA	5592747	5606649	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_5593769_5603256_5603414_5603495_5603618_5603862_5604031_5605271_5605849_5606022
transcript_176658.known	chr7	+	2784	5	FSM	ENSG00000075618.18	ENST00000382361.8	2784	5	0	0	0	0	multi-exon	FALSE	canonical	1	391	junction_4	374.07778268697	6910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCGGCCTGTGTGTGTCTT	5546045	True	NA	32	True	AATAAA	-22	NA	5592815	5606655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_5593769_5603256_5603414_5603495_5603618_5603862_5604031_5605271
transcript_176675.known	chr7	-	5639	17	FSM	ENSG00000011275.19	ENST00000425013.6	5639	17	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_14	31.5693061968425	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCAGCTTCGTCTCTCCA	-5777659	True	NA	-6	True	AATAAA	-19	NA	5781696	5620046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_5623180_5624055_5624126_5641153_5641377_5652412_5652511_5711760_5711840_5712714_5712864_5715052_5715191_5716715_5716767_5721032_5721173_5725323_5725439_5729431_5729597_5730714_5730818_5739275_5739353_5740972_5741645_5752845_5752980_5761002_5761139_5781540
transcript_176676.known	chr7	-	5777	17	FSM	ENSG00000011275.19	ENST00000389902.8	5777	17	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_14	40.2103842309421	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCAGCTTCGTCTCTCCA	-5777626	True	NA	-6	True	AATAAA	-19	NA	5781663	5620046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_5623180_5624055_5624126_5641153_5641377_5652412_5652511_5711760_5711840_5712714_5712864_5715052_5715191_5716715_5716767_5721032_5721173_5725323_5725439_5729431_5729597_5730714_5730818_5739275_5739353_5740972_5741816_5752845_5752980_5761002_5761139_5781540
transcript_176691.nic	chr7	-	1662	8	ISM	ENSG00000011275.19	ENST00000389902.8	5777	17	-23	105334	10	4149	5prime_fragment	FALSE	canonical	3	74	junction_5	59.2173443979973	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAAGAGAAAACAAATG	-5777649	True	NA	10	True	ATTAAA	-38	NA	5781686	5725380	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_5725439_5729431_5729597_5730714_5730818_5739275_5739353_5740972_5741816_5752845_5752980_5761002_5761139_5781540
transcript_17670.known	chr1	+	2483	16	FSM	ENSG00000116698.22	ENST00000419169.5	2483	16	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	68.8010335839675	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAAAAATGAAGCCTT	183466155	True	NA	NA	False	NA	NA	NA	183472501	183546129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_183472650_183515873_183515992_183517687_183517821_183526595_183526768_183527955_183528028_183528891_183529043_183529397_183529534_183533163_183533327_183533675_183533833_183537144_183537216_183538379_183538441_183540983_183541104_183542075_183542365_183544352_183544498_183544929_183545313_183545965
transcript_176703.known	chr7	+	2379	15	FSM	ENSG00000122674.12	ENST00000325974.9	2379	15	0	0	0	0	multi-exon	FALSE	canonical	3	993	junction_8	254.686081284392	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGCAAACATGAGAAGGT	5898709	False	NA	NA	False	NA	NA	NA	5898732	5926550	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_5898920_5900283_5900382_5900472_5900567_5900854_5900933_5901656_5901705_5902660_5902745_5905093_5905270_5910034_5910117_5911860_5911923_5912842_5912955_5918866_5918901_5919848_5919967_5923386_5923546_5923834_5923963_5925631
transcript_176710.known	chr7	+	2062	3	FSM	ENSG00000122674.12	ENST00000478672.1	2062	3	0	0	0	0	multi-exon	FALSE	canonical	3	1617	junction_2	208.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGGA	5898757	False	NA	NA	False	NA	NA	NA	5898780	5902297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_5898920_5900283_5900382_5900472
transcript_176713.known	chr7	-	2765	15	FSM	ENSG00000122512.16	ENST00000642456.1	2765	15	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_14	30.9271692192863	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAGTGATCTTGAGAA	-6006483	True	NA	-34	True	AATACA	-12	NA	6009075	5973273	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_5973543_5977587_5977758_5978595_5978697_5982823_5982992_5986758_5987621_5989799_5989956_5991972_5992058_5995533_5995634_5997325_5997424_5999107_5999276_6002452_6002637_6003689_6003793_6003971_6004059_6005891_6006027_6008996
transcript_176714.known	chr7	-	2600	15	FSM	ENSG00000122512.16	ENST00000643595.1	2600	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	33.4503134422946	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTATGTTTTGAAAGACA	-6006449	True	NA	-121	True	NA	NA	NA	6009041	5973360	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_5973543_5977587_5977758_5978595_5978697_5982823_5982992_5986758_5987621_5989799_5989956_5991972_5992058_5995533_5995634_5997325_5997424_5999107_5999227_6002452_6002637_6003689_6003793_6003971_6004059_6005891_6006032_6008996
transcript_176718.known	chr7	-	2679	14	FSM	ENSG00000122512.16	ENST00000642292.1	2679	14	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_13	32.8388570529545	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAGATGGAGCATTGCT	-6006505	True	NA	-7	True	AATACA	-39	NA	6009097	5973246	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_5973543_5977587_5977758_5978595_5978697_5982823_5982992_5986758_5987621_5989799_5989956_5991972_5992058_5995533_5995634_5997325_5997424_5999107_5999276_6002452_6002637_6003689_6003793_6003971_6004059_6008996
transcript_176727.known	chr7	-	1719	12	FSM	ENSG00000122512.16	ENST00000406569.7	1719	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	27.6778994091401	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCATGCTGAGCGACAGC	-6006427	True	NA	NA	False	AGTAAA	-38	NA	6009019	5977673	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_5977715_5987086_5987621_5989799_5989956_5991972_5992058_5995533_5995634_5997325_5997424_5999107_5999276_6002452_6002637_6003689_6003793_6003971_6004059_6005891_6006032_6008996
transcript_176732.known	chr7	-	4411	15	FSM	ENSG00000086232.13	ENST00000199389.11	4411	15	0	0	0	0	multi-exon	FALSE	canonical	3	699	junction_8	40.0731474039305	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGATGCTGGGCATGGTG	-6049749	True	NA	-24	True	AATAAA	-25	NA	6059175	6022246	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_6024802_6026727_6026962_6028614_6028698_6028917_6029033_6037423_6037525_6038559_6038672_6040891_6041220_6042932_6042994_6044561_6044662_6046070_6046152_6046991_6047092_6048806_6048845_6049911_6050046_6054545_6054705_6058965
transcript_176743.nic	chr7	-	776	6	ISM	ENSG00000086232.13	ENST00000199389.11	4411	15	-54	23824	-54	0	5prime_fragment	FALSE	canonical	3	738	junction_5	9.50789145920377	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGATTTTTAAAAATTAC	-6049803	True	NA	NA	False	AATAAA	-44	NA	6059229	6046070	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_6046152_6046991_6047092_6048806_6048845_6049911_6050046_6054545_6054705_6058965
transcript_176747.known	chr7	-	791	5	FSM	ENSG00000086232.13	ENST00000463213.5	791	5	0	0	0	0	multi-exon	FALSE	canonical	3	738	junction_4	8.67107259801231	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTGTTGGCCAGGATGGT	-6049630	False	NA	NA	False	AATAGA	-12	NA	6059056	6046722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_6047092_6048806_6048845_6049911_6050046_6054545_6054705_6058965
transcript_176748.known	chr7	+	1198	4	FSM	ENSG00000106305.10	ENST00000223029.8	1198	4	0	0	0	0	multi-exon	FALSE	canonical	3	692	junction_1	9.7410927974683	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTTTCATTTTATTTAAA	5997443	True	NA	16	True	AATAAA	-17	NA	6009271	6023834	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_6009499_6015145_6015353_6017813_6018046_6023302
transcript_176749.nnic	chr7	+	1112	4	NIC	ENSG00000106305.10	novel	1198	4	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	3	108	junction_1	284.966664717121	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTTTCATTTTATTTAAA	5997409	True	NA	16	True	AATAAA	-17	NA	6009237	6023834	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_6009379_6015145_6015353_6017813_6018046_6023302
transcript_17675.known	chr1	+	5629	22	FSM	ENSG00000116698.22	ENST00000515829.6	5629	22	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_17	44.3368879962071	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCTGTGTATCGATTCTT	183466180	False	NA	11	True	ATTAAA	-18	NA	183472526	183554190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_183472650_183512836_183512869_183515873_183515992_183517687_183517821_183526595_183526768_183527955_183528028_183528891_183529043_183529397_183529534_183533163_183533327_183533675_183533833_183537144_183537216_183538379_183538441_183540983_183541104_183542075_183542365_183544352_183544498_183544929_183545313_183545965_183546338_183549207_183549289_183549763_183549924_183550750_183550922_183551044_183551191_183551817
transcript_176751.known	chr7	+	860	3	FSM	ENSG00000106305.10	ENST00000395236.2	860	3	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	287.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATCAGTAAGGGGACTT	5997487	True	NA	-71	True	TTTAAA	-36	NA	6009315	6023747	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_6009499_6017813_6018046_6023302
transcript_176753.known	chr7	-	573	5	FSM	ENSG00000086232.13	ENST00000446699.1	573	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	323.401453305331	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTAGTGATACATGAGGT	-6049738	True	NA	NA	False	NA	NA	NA	6059164	6047203	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_6047247_6048806_6048845_6049911_6050046_6054545_6054705_6058965
transcript_176755.known	chr7	+	5155	18	FSM	ENSG00000106346.12	ENST00000306177.10	5090	18	-65	0	-65	0	multi-exon	FALSE	canonical	3	78	junction_12	14.1090660195718	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGCGTCTTTTTACTG	6101481	True	NA	12	True	TATAAA	-16	NA	6104883	6161564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_6105033_6111124_6111375_6115322_6115524_6135840_6135952_6139091_6139195_6140127_6140196_6140913_6140985_6142931_6143015_6144084_6144197_6145515_6145657_6146147_6146249_6147738_6147893_6149582_6150303_6150411_6150507_6153755_6155196_6156753_6157056_6159449_6159494_6160554
transcript_17676.known	chr1	+	5788	22	FSM	ENSG00000116698.22	ENST00000347615.6	5788	22	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_14	50.0002721081031	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGATCTGTGTATCGAT	183466155	True	NA	7	True	ATTAAA	-14	NA	183472501	183554186	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_183472650_183512836_183512869_183515873_183515992_183517687_183517821_183526595_183526768_183527955_183528028_183528891_183529043_183529397_183529534_183533163_183533327_183533675_183533833_183537144_183537216_183538379_183538441_183540983_183541104_183542075_183542503_183544352_183544498_183544929_183545313_183545965_183546338_183549207_183549289_183549763_183549924_183550750_183550922_183551044_183551191_183551817
transcript_176769.known	chr7	+	4286	16	FSM	ENSG00000106346.12	ENST00000479544.6	4286	16	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_12	14.5321100402599	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTGACTTTGCCTTGCA	6101572	True	NA	NA	False	NA	NA	NA	6104974	6157331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_6105033_6111124_6111375_6115322_6115524_6135840_6135952_6139091_6139195_6140127_6140196_6140913_6140985_6142931_6143015_6144084_6144197_6145515_6145657_6146147_6146249_6147738_6147893_6149582_6150303_6150411_6150507_6153755_6155196_6156753
transcript_17677.known	chr1	-	7266	4	FSM	ENSG00000162704.16	ENST00000359856.11	7266	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	376.263501049759	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAATTGAGTTTATTAATC	-183630965	True	NA	NA	False	AATAAA	-20	NA	183635783	183620845	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_183627595_183630460_183630638_183633081_183633155_183635516
transcript_176773.nic	chr7	+	3791	15	ISM	ENSG00000106346.12	ENST00000479544.6	4286	16	-131	2184	-105	0	5prime_fragment	FALSE	canonical	3	78	junction_12	15.0388951504736	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAGAAAAAGAAATCCA	6104833	False	NA	NA	False	NA	NA	NA	6104843	6155147	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_6105033_6111124_6111375_6115322_6115524_6135840_6135952_6139091_6139195_6140127_6140196_6140913_6140985_6142931_6143015_6144084_6144197_6145515_6145657_6146147_6146249_6147738_6147893_6149582_6150303_6150411_6150507_6153755
transcript_176777.nic	chr7	+	1699	13	ISM	ENSG00000106346.12	ENST00000479544.6	4286	16	-68	7571	-42	-62	5prime_fragment	FALSE	canonical	3	78	junction_12	16.1578584252025	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACAATCAGTATTCACAAC	6101504	True	NA	NA	False	AAGAAA	-8	NA	6104906	6149760	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_6105033_6111124_6111375_6115322_6115524_6135840_6135952_6139091_6139195_6140127_6140196_6140913_6140985_6142931_6143015_6144084_6144197_6145515_6145657_6146147_6146249_6147738_6147893_6149582
transcript_176781.known	chr7	-	4482	13	FSM	ENSG00000008256.16	ENST00000350796.8	4482	13	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	9.60432483600776	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCTAAGACTTGGTTCT	-6271445	True	NA	NA	False	AATAAA	-21	NA	6272624	6161778	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_6165017_6165272_6165428_6165544_6165617_6165733_6165811_6170534_6170647_6170829_6170979_6171201_6171315_6173652_6173734_6177822_6177942_6187049_6187117_6187656_6187722_6190448_6190532_6272473
transcript_176792.known	chr7	-	4508	13	FSM	ENSG00000008256.16	ENST00000396741.3	4508	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	23.5989347688031	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAAGACTTGGTTCTTTA	-6271465	True	NA	NA	False	AATAAA	-24	NA	6272644	6161775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_6165017_6165272_6165428_6165544_6165617_6165733_6165811_6170531_6170647_6170829_6170979_6171201_6171315_6173652_6173734_6177822_6177942_6187049_6187117_6187656_6187722_6190448_6190532_6272473
transcript_176794.known	chr7	-	207	2	FSM	ENSG00000286075.2	ENST00000578372.1	207	2	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	0	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCCTCCCAGACTGACGA	-6346490	False	NA	NA	False	NA	NA	NA	6348758	6331214	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_6331236_6348572
transcript_176797.known	chr7	+	907	7	FSM	ENSG00000136238.18	ENST00000356142.4	907	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	1722.58952355652	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACAAAAAAAAAAAACAA	6335329	True	NA	-86	True	AAAACA	-8	NA	6374538	6402520	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_6374771_6387211_6387284_6391923_6392042_6398661_6398719_6400125_6400189_6401867_6402028_6402315
transcript_17680.known	chr1	-	622	4	FSM	ENSG00000162704.16	ENST00000367534.5	622	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	387.494516090228	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTACATCTCTTATTTCT	-183631735	False	NA	NA	False	CATAAA	-8	NA	183635682	183623265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_183623472_183630460_183630638_183633081_183633155_183635516
transcript_176801.known	chr7	+	2309	6	FSM	ENSG00000136238.18	ENST00000348035.9	2309	6	0	0	0	0	multi-exon	FALSE	canonical	3	3568	junction_1	63.1803767003648	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACTGGTAATACTGGTGTT	6335317	True	NA	14	True	AATAAA	-14	NA	6374526	6403967	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_6374771_6387211_6387284_6391923_6392042_6400125_6400189_6401867_6402028_6402315
transcript_176814.known	chr7	-	2839	15	FSM	ENSG00000164535.15	ENST00000297056.11	2839	15	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_12	13.0188246749992	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTGTGTGTACAGCTGC	-6445328	True	NA	-14	True	AATAAA	-16	NA	6447954	6409128	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_6410036_6410129_6410381_6412810_6412884_6412965_6413035_6416626_6416755_6416840_6416922_6421726_6421805_6424751_6424836_6425987_6426115_6430479_6430608_6432836_6432960_6434761_6435021_6436361_6436534_6445952_6446105_6447747
transcript_176833.known	chr7	-	2044	13	FSM	ENSG00000164535.15	ENST00000425398.6	2044	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	45.5033576294712	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCCACCCAGAAGACCGT	-6445308	True	NA	NA	False	NA	NA	NA	6447934	6409516	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_6410036_6410129_6410381_6412810_6412884_6412965_6413035_6416626_6416755_6416840_6416922_6421726_6421805_6424751_6424836_6425987_6426115_6432836_6432960_6436361_6436534_6445952_6446105_6447747
transcript_176859.known	chr7	-	2786	5	FSM	ENSG00000136240.10	ENST00000258739.9	2786	5	0	0	0	0	multi-exon	FALSE	canonical	3	963	junction_2	49.7543967906355	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTATTGAGGTGTTTG	-6473930	True	NA	-11	True	AATAAA	-18	NA	6484152	6461088	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_6463176_6466070_6466324_6469595_6469755_6474183_6474285_6483966
transcript_17686.known	chr1	+	4725	18	FSM	ENSG00000143344.16	ENST00000360851.4	4725	18	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	3.25820762920617	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATCTGGATTATTAACC	183805018	True	NA	8	True	AATAAA	-45	NA	183805119	183928532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_183805325_183806374_183806486_183847565_183847775_183865995_183866074_183880615_183880801_183883785_183883911_183884722_183884939_183888473_183888578_183892076_183892162_183897807_183897898_183900149_183900237_183902567_183902601_183904849_183904972_183907011_183907102_183912081_183912269_183916446_183916702_183922221_183922337_183926104
transcript_176867.known	chr7	-	655	4	FSM	ENSG00000136240.10	ENST00000490996.1	655	4	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	487.136074988863	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGGGATAGTTCCAAAAG	-6473835	False	NA	-22	True	AATAAA	-17	NA	6484057	6462871	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_6463176_6469595_6469755_6474183_6474285_6483966
transcript_176868.known	chr7	-	382	2	FSM	ENSG00000136240.10	ENST00000462052.1	382	2	0	0	0	0	multi-exon	FALSE	canonical	3	1015	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCTTAATATGCTGTTC	-6473921	True	NA	NA	False	ATTAAA	-14	NA	6484143	6474079	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_6474285_6483966
transcript_176871.known	chr7	+	1461	9	FSM	ENSG00000136247.15	ENST00000396707.6	1461	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	118.821294387833	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTTGTTTGTTTTGATT	6574095	True	NA	12	True	NA	NA	NA	6577433	6588978	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_6577499_6577589_6577721_6578565_6578721_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
transcript_176873.known	chr7	+	1348	8	FSM	ENSG00000136247.15	ENST00000405731.7	1348	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	97.3109889551461	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTAGTTCCCGTTTATTT	6574095	True	NA	25	True	AAGAAA	-31	NA	6577433	6588931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_6577499_6578500_6578721_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
transcript_176878.known	chr7	+	1706	8	FSM	ENSG00000136247.15	ENST00000335965.11	1706	8	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	54.3454558489353	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATGGGCTTGTACATCA	6574115	True	NA	NA	False	NA	NA	NA	6577453	6589374	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_6577499_6578565_6578721_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
transcript_176883.known	chr7	+	1942	8	FSM	ENSG00000136247.15	ENST00000396706.2	1942	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	109.404883672661	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATGGGCTTGTACATCA	6574166	False	NA	NA	False	NA	NA	NA	6577504	6589374	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_6577721_6578500_6578721_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
transcript_176884.known	chr7	+	1552	8	FSM	ENSG00000136247.15	ENST00000396713.6	1552	8	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	87.6665761361111	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTTGTTTGTTTTGATT	6574095	True	NA	12	True	NA	NA	NA	6577433	6588978	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_6577721_6578565_6578721_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
transcript_176886.known	chr7	+	1485	8	FSM	ENSG00000136247.15	ENST00000396709.5	1485	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	128.286191535861	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGCCTTTGAGCTGTAGT	6574129	True	NA	13	True	AAGAAA	-19	NA	6577467	6588919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_6577721_6578565_6578747_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
transcript_176895.known	chr7	+	1604	6	FSM	ENSG00000136247.15	ENST00000474097.5	1604	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	125.295490740888	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATGTACAGTTGAAAAA	6574129	True	NA	NA	False	ACTAAA	-36	NA	6577467	6584320	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_6577499_6578565_6578747_6580554_6580679_6581606_6581681_6582072_6582252_6583305
transcript_176905.nic	chr7	+	2299	7	NIC	ENSG00000146576.13	novel	2178	6	NA	NA	-63	-1	intron_retention	FALSE	canonical	3	25	junction_5	37.2308862221797	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGTAGACTTTATGGAAT	6588528	True	NA	9	True	AATAAA	-14	NA	6589957	6608723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_6590476_6591645_6591868_6594434_6594601_6599828_6600357_6602100_6602141_6607536_6607598_6607959
transcript_176909.known	chr7	+	2178	6	FSM	ENSG00000146576.13	ENST00000344417.10	2178	6	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_2	11.2356575241505	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGACTTTATGGAATGTA	6588591	True	NA	12	True	AATAAA	-17	NA	6590020	6608726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_6590476_6591645_6591868_6594434_6594601_6599828_6600357_6602100_6602141_6607959
transcript_17691.known	chr1	-	5179	12	FSM	ENSG00000198756.12	ENST00000361927.9	5179	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	2.94859540731397	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGATTGTCAATTGCTT	NA	False	NA	-12	True	ATTAAA	-18	NA	184037728	183935833	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_183939038_183940580_183940788_183944195_183944324_183945431_183945565_183951006_183951114_183954761_183954839_183963900_183964021_183969268_183969474_183973615_183973751_183975096_183975215_183978409_183978521_184037094
transcript_176910.nnic	chr7	+	2019	6	NNC	ENSG00000146576.13	novel	2178	6	NA	NA	-32	0	intron_retention	FALSE	canonical	1	1	junction_5	41.8664543519033	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTAGACTTTATGGAATG	6588559	True	NA	10	True	AATAAA	-15	NA	6589988	6608724	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_6590476_6591645_6591868_6594434_6594601_6599828_6600357_6602100_6602141_6608148
transcript_176916.known	chr7	-	2921	6	FSM	ENSG00000164631.19	ENST00000342651.9	2921	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	28.7847181678056	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAAGATTCCTGCTGTGA	-6704780	True	NA	22	True	AAAAAG	-3	NA	6706923	6690448	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_6692488_6692601_6692704_6697338_6697435_6697684_6697812_6705158_6705224_6706431
transcript_176918.known	chr7	-	5075	5	FSM	ENSG00000164631.19	ENST00000405858.6	5075	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	6.97764286847643	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGGCATTTTCTTCTT	-6704804	True	NA	0	True	AGTAAA	-19	NA	6706947	6688432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_6692704_6697338_6697435_6697684_6697812_6705158_6705224_6706431
transcript_176922.nic	chr7	+	2537	10	ISM	ENSG00000187953.10	ENST00000486256.5	3327	14	19581	2337	-72	133	internal_fragment	TRUE	canonical	2	9	junction_2	36.6999848622433	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATCTTGAGAACCTTTTC	6728944	True	NA	23	True	AATACA	-19	NA	6729708	6751525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_6730302_6730633_6730728_6731896_6731956_6733398_6733528_6735304_6735390_6737075_6737937_6741684_6741853_6746087_6746189_6747035_6747206_6751248
transcript_17693.known	chr1	+	1632	6	FSM	ENSG00000198860.14	ENST00000462677.3	1632	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	200.741226458344	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGCGTGGCTTTGTTCCAG	184048531	True	NA	NA	False	CATAAA	-6	NA	184051755	184073846	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184070615_184070733_184072156_184072299_184072826
transcript_176936.known	chr7	-	1814	15	FSM	ENSG00000146574.16	ENST00000316731.13	1814	15	0	0	0	0	multi-exon	FALSE	canonical	3	514	junction_3	351.54122033104	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTTTGGTGTTGAGTC	-6826263	False	NA	-2	True	AATAAA	-20	NA	6826275	6798936	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_6799280_6800947_6801076_6801364_6801524_6804937_6805056_6806003_6806038_6811951_6812064_6812975_6813038_6814763_6814846_6819765_6819942_6822280_6822365_6823312_6823361_6824088_6824167_6824454_6824549_6824639_6824738_6826077
transcript_17694.known	chr1	+	1834	5	FSM	ENSG00000198860.14	ENST00000533373.6	1834	5	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	168.674798058275	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTTGAAATCTGTATT	184048474	True	NA	17	True	AATAAA	-19	NA	184051698	184074212	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184072156_184072195_184072826
transcript_176941.known	chr7	-	631	4	FSM	ENSG00000146574.16	ENST00000496187.5	631	4	0	0	0	0	multi-exon	FALSE	canonical	3	1599	junction_2	175.518913194245	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTTACTGATTGACAAATT	-6826193	False	NA	NA	False	NA	NA	NA	6826205	6823855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_6824167_6824454_6824549_6824639_6824738_6826077
transcript_176943.known	chr7	-	748	3	FSM	ENSG00000146574.16	ENST00000464543.1	748	3	0	0	0	0	multi-exon	FALSE	canonical	3	1599	junction_1	214.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTTGAATGCCTTACTT	-6826204	False	NA	NA	False	TTTAAA	-12	NA	6826216	6824037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_6824549_6824639_6824738_6826077
transcript_176946.known	chr7	-	545	2	FSM	ENSG00000146574.16	ENST00000486840.1	545	2	0	0	0	0	multi-exon	FALSE	canonical	3	2028	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTAGGAAAGTTCTCTG	-6826260	False	NA	NA	False	NA	NA	NA	6826272	6824387	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_6824738_6826077
transcript_176959.nnic	chr7	+	2135	5	NNC	ENSG00000106392.11	novel	6275	4	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	233.158208090558	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGGCCTTGACTATATT	NA	False	NA	28	True	AATAAA	-18	NA	7182510	7244350	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_7182821_7234302_7234540_7237538_7237632_7238254_7238923_7243523
transcript_17696.known	chr1	+	1907	5	FSM	ENSG00000198860.14	ENST00000645668.2	1907	5	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_4	111.777401562212	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTTGAAATCTGTATT	184048505	True	NA	17	True	AATAAA	-19	NA	184051729	184074212	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184072156_184072299_184072826
transcript_176962.nnic	chr7	+	2239	5	NNC	ENSG00000106392.11	novel	6275	4	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_1	232.367166355318	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGGCCTTGACTATATT	NA	False	NA	28	True	AATAAA	-18	NA	7182511	7244350	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_7182821_7215041_7215240_7234302_7234540_7238254_7238923_7243523
transcript_176965.known	chr7	+	6275	4	FSM	ENSG00000106392.11	ENST00000436587.7	6275	4	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_1	66.5482281256734	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTTCATCTGATTATTT	7176000	True	NA	15	True	AATAAA	-15	NA	7182543	7248616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_7182821_7234302_7234540_7238254_7238923_7243523
transcript_17698.known	chr1	+	609	5	FSM	ENSG00000198860.14	ENST00000645963.2	609	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	222.248734529581	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGTCTGTGGTATTTTG	184048531	True	NA	8	True	AATAAA	-18	NA	184051755	184095845	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184093624_184093725_184095689
transcript_176981.known	chr7	+	4877	13	FSM	ENSG00000164654.16	ENST00000340080.9	4877	13	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	83.9740369929235	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGTTTATGTCTCTGG	7566592	True	NA	NA	False	NA	NA	NA	7566883	7608932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_7567073_7567606_7567689_7568025_7568124_7572435_7573770_7574097_7574197_7583117_7583373_7585635_7585806_7588497_7588564_7589404_7589564_7594979_7595133_7596256_7596462_7605941_7606072_7606995
transcript_176988.nic	chr7	+	3710	12	NIC	ENSG00000164654.16	novel	4877	13	NA	NA	1	0	intron_retention	FALSE	canonical	3	88	junction_1	62.3644314818117	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCAGTTTTGATGTTTGA	7566734	True	NA	16	True	AATAAA	-14	NA	7566875	7607223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_7567689_7568025_7568124_7572435_7573770_7574097_7574197_7583117_7583373_7585635_7585806_7588497_7588564_7589404_7589564_7594979_7595133_7596256_7596462_7605941_7606072_7606995
transcript_176989.nic	chr7	+	3968	12	NIC	ENSG00000164654.16	novel	4877	13	NA	NA	1	258	intron_retention	FALSE	canonical	3	88	junction_1	62.3644314818117	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTAATTCTGTGATTCAG	7566734	True	NA	6	True	AATAAA	-24	NA	7566875	7607481	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_7567689_7568025_7568124_7572435_7573770_7574097_7574197_7583117_7583373_7585635_7585806_7588497_7588564_7589404_7589564_7594979_7595133_7596256_7596462_7605941_7606072_7606995
transcript_17699.known	chr1	+	1844	4	FSM	ENSG00000198860.14	ENST00000423085.7	1844	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	191.731293452292	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTTGAAATCTGTATT	184048426	True	NA	17	True	AATAAA	-19	NA	184051650	184074212	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184072826
transcript_176990.known	chr7	+	3095	12	FSM	ENSG00000164654.16	ENST00000405785.5	3095	12	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	74.2348295435193	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCAGTTTTGATGTTTGA	7566733	True	NA	16	True	AATAAA	-14	NA	7566874	7607223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_7567073_7568025_7568124_7572435_7573770_7574097_7574197_7583117_7583373_7585635_7585806_7588497_7588564_7589404_7589564_7594979_7595133_7596256_7596462_7605941_7606072_7606995
transcript_176992.nic	chr7	+	3019	11	NIC	ENSG00000164654.16	novel	3095	12	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_1	63.3909299505852	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCAGTTTTGATGTTTGA	NA	False	NA	16	True	AATAAA	-14	NA	7566852	7607223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_7567073_7572435_7573770_7574097_7574197_7583117_7583373_7585635_7585806_7588497_7588564_7589404_7589564_7594979_7595133_7596256_7596462_7605941_7606072_7606995
transcript_176994.nic	chr7	+	3409	11	NIC	ENSG00000164654.16	novel	3095	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	77.1420119001313	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCAGTTTTGATGTTTGA	7566733	True	NA	16	True	AATAAA	-14	NA	7566874	7607223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_7567485_7572435_7573770_7574097_7574197_7583117_7583373_7585635_7585806_7588497_7588564_7589404_7589564_7594979_7595133_7596256_7596462_7605941_7606072_7606995
transcript_1770.known	chr1	-	4303	7	FSM	ENSG00000130764.10	ENST00000378251.3	4303	7	0	0	0	0	multi-exon	FALSE	canonical	3	536	junction_1	7.38052994182818	2321	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGCAGATCCTTTCCCA	-3788814	True	NA	71	True	AATAAA	-17	NA	3796498	3778558	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3781337_3781511_3781602_3782660_3782764_3783995_3784112_3785086_3785204_3786848_3787311_3795861
transcript_17700.known	chr1	+	2219	4	FSM	ENSG00000198860.14	ENST00000643231.1	2219	4	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_3	155.982905046248	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATTAAACCGACTTCTTT	184048461	True	NA	NA	False	NA	NA	NA	184051685	184097485	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184095689
transcript_177003.known	chr7	+	559	5	FSM	ENSG00000219545.12	ENST00000463725.5	559	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	47.3675785743793	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCGACCACTTACTCTCC	7637955	True	NA	NA	False	NA	NA	NA	7640751	7877443	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_7640822_7673308_7673454_7676101_7676209_7801669_7801744_7877280
transcript_177006.known	chr7	+	2157	4	FSM	ENSG00000219545.12	ENST00000636849.1	2157	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	60.4777277644883	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATAAAATTTTTGATTA	7637979	True	NA	-4	True	AATAAA	-8	NA	7640775	7879185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_7640822_7673321_7673454_7801669_7801744_7877280
transcript_177007.known	chr7	+	569	4	FSM	ENSG00000219545.12	ENST00000482067.3	569	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	44.5446093508768	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTATTACATTACATCT	7637997	True	NA	NA	False	AATAAA	-18	NA	7640793	7968020	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_7640822_7673308_7673454_7801669_7801744_7967698
transcript_17701.known	chr1	-	952	1	FSM	ENSG00000271387.1	ENST00000605589.1	952	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGTTGTTTTAATTTTT	-184386331	False	NA	NA	False	ATTAAA	-15	NA	184386704	184385752	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_184385800_184386700
transcript_177012.known	chr7	+	4741	8	FSM	ENSG00000106415.13	ENST00000223145.10	4741	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	24.2411355563477	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTCACACATGTTTTTGG	7967548	True	NA	14	True	AATAAA	-20	NA	7968795	8089080	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_7969808_8003907_8004060_8022482_8022570_8055432_8055550_8060095_8060249_8070920_8071132_8084896_8085018_8086192
transcript_17702.nnic	chr1	+	1359	6	NNC	ENSG00000116667.15	novel	2607	6	NA	NA	-216	388	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	94.2452120799778	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTTGTCTTCTCCCATT	184386801	False	NA	8	True	AATAAA	-19	NA	184386812	184620324	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_184386993_184477464_184477604_184507587_184507683_184590738_184590816_184598400_184598462_184619517
transcript_177021.known	chr7	-	2309	14	FSM	ENSG00000003147.19	ENST00000265577.11	2309	14	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_13	107.815972952381	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGAAGCCTCTTGTGAC	-8262178	False	NA	-24	True	NA	NA	NA	8262206	8113254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_8114045_8127872_8128143_8138839_8138882_8138984_8139048_8141764_8141818_8143874_8143973_8157115_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232753_8235909_8236006_8262093
transcript_177022.known	chr7	-	2440	14	FSM	ENSG00000003147.19	ENST00000406470.6	2440	14	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_5	38.7389992019876	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCAAGTTTATGGAGTC	NA	False	NA	44	True	ATTAAA	-22	NA	8262612	8113186	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_8114045_8127872_8128143_8138839_8138882_8138984_8139048_8141764_8141818_8143874_8143973_8157115_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232756_8235909_8236006_8262439
transcript_177023.nnic	chr7	-	1711	14	NIC	ENSG00000003147.19	novel	1956	15	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_13	98.6843032907277	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTACTCTTATTTGGTA	-8262159	False	NA	-6	True	AATAAA	-37	NA	8262187	8113771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_8114045_8127872_8128143_8138839_8138882_8138984_8139048_8141764_8141818_8143874_8143973_8157115_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232756_8235909_8235941_8262093
transcript_177024.nic	chr7	-	1791	14	NIC	ENSG00000003147.19	novel	2440	14	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_13	94.6902143116728	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTACTCTTATTTGGTA	NA	False	NA	-6	True	AATAAA	-37	NA	8262613	8113771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_8114045_8127872_8128143_8138839_8138882_8138984_8139048_8141764_8141818_8143874_8143973_8157115_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232756_8235909_8235941_8262439
transcript_17703.known	chr1	+	10293	6	FSM	ENSG00000116667.15	ENST00000235307.7	10293	6	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	27.6911538221144	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTGGCTTTGTTCTCTTT	184383014	True	NA	8	True	ATTAAA	-16	NA	184387028	184629019	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_184387369_184477385_184477604_184507587_184507683_184590738_184590816_184598400_184598462_184619517
transcript_177043.nic	chr7	-	1082	9	ISM	ENSG00000003147.19	ENST00000406470.6	2440	14	26	30734	26	-2156	5prime_fragment	FALSE	canonical	3	285	junction_8	38.8343839271334	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAACCAGCAGGAAAGTACA	-8262558	False	NA	NA	False	AAGAAA	-2	NA	8262586	8143920	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_8143973_8157115_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232756_8235909_8236006_8262439
transcript_177052.known	chr7	-	1615	8	FSM	ENSG00000003147.19	ENST00000407906.5	1615	8	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_7	39.6911546204194	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGGATACGTGCACAGTG	NA	False	NA	NA	False	ATTAAA	-21	NA	8262612	8156556	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232756_8235909_8236006_8262439
transcript_177059.known	chr7	-	539	4	FSM	ENSG00000003147.19	ENST00000446305.1	539	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	131.699995781659	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATCGAAAGCAATTGTAC	NA	False	NA	NA	False	NA	NA	NA	8262687	8228641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_8228674_8232589_8232753_8235909_8236006_8262439
transcript_177060.known	chr7	+	429	2	FSM	ENSG00000244239.1	ENST00000458624.1	429	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTGTATGTATAGGTATA	8262085	False	NA	8	True	AATAAA	-19	NA	8262232	8262821	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_8262420_8262579
transcript_177061.known	chr7	+	1953	1	FSM	ENSG00000122584.13	ENST00000602349.2	1953	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGTACTTGTGTAAGAT	NA	False	NA	NA	False	AATAAA	-20	NA	8751006	8752959	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_8751000_8753000
transcript_177062.known	chr7	+	855	6	FSM	ENSG00000234710.3	ENST00000657272.2	860	6	0	5	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.4	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATCTGTTCCATTTTTATT	9621743	False	NA	NA	False	AATAAA	-15	NA	9621763	9769513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_9622043_9716789_9716910_9740953_9741019_9743246_9743303_9760555_9760610_9769232
transcript_177065.known	chr7	-	2035	4	FSM	ENSG00000189043.10	ENST00000339600.6	2035	4	0	0	0	0	multi-exon	FALSE	canonical	3	11961	junction_2	636.085424032548	2532	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACGTTTTCTAGAATTGAG	-10862285	True	NA	NA	False	AATAAA	-23	NA	10940153	10931942	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_10933693_10938089_10938148_10938807_10938897_10940015
transcript_177067.known	chr7	+	313	1	FSM	ENSG00000271185.1	ENST00000604183.1	313	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAGTCCTGGCAGTGTAT	NA	False	NA	NA	False	AGTAAA	-15	NA	10940422	10940735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_10940400_10940700
transcript_17707.nic	chr1	+	714	3	ISM	ENSG00000116667.15	ENST00000648109.1	3072	7	-307	114296	-65	-84570	5prime_fragment	FALSE	canonical	3	178	junction_1	19.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGTAAGAATTGATTTTC	184386948	False	NA	NA	False	AAGAAA	-2	NA	184386963	184507678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_184387369_184477385_184477604_184507587
transcript_177070.known	chr7	+	3427	18	FSM	ENSG00000106443.17	ENST00000634607.2	3427	18	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_2	20.6555203040529	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAGCTTGTATTTGGAAT	10968771	True	NA	NA	False	AATAAA	-17	NA	10973871	11169618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_10974325_10974834_10974946_10982371_10983160_10990702_10990848_11013746_11013907_11022867_11022980_11028680_11028819_11035639_11035787_11036417_11036689_11036984_11037092_11038759_11038856_11040671_11040776_11042682_11042815_11051611_11051781_11061790_11061842_11061963_11062086_11111349_11111468_11169415
transcript_177071.known	chr7	+	2627	17	FSM	ENSG00000106443.17	ENST00000423760.6	2627	17	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	41.0144315302553	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTATTTGGAATTCGTA	10968788	True	NA	NA	False	AATAAA	-22	NA	10973888	11169623	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_10974325_10974834_10974946_10990702_10990848_11013746_11013907_11022867_11022980_11028680_11028819_11035639_11035787_11036417_11036689_11036984_11037092_11038759_11038856_11040671_11040776_11042682_11042815_11051611_11051781_11061790_11061842_11061963_11062086_11111349_11111468_11169415
transcript_177072.known	chr7	+	2479	16	FSM	ENSG00000106443.17	ENST00000521747.5	2479	16	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_15	54.1678871657369	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAAGTTGCCTTTTGCTTG	10968771	True	NA	NA	False	AGTAAA	-42	NA	10973871	11102646	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_10974325_10974834_10974946_10990702_10990848_11013746_11013907_11022867_11022980_11028680_11028819_11035639_11035787_11036417_11036689_11036984_11037092_11038759_11038856_11040671_11040776_11042682_11042815_11051611_11051781_11061790_11061842_11061963_11062086_11102485
transcript_177073.nic	chr7	+	2461	10	ISM	ENSG00000106443.17	ENST00000490957.5	4058	16	-112	26029	-77	210	5prime_fragment	FALSE	canonical	3	125	junction_2	17.3019659198415	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATAAATTAGAGAATGAACA	10973783	False	NA	NA	False	TATAAA	-2	NA	10973794	11037043	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_10974325_10974834_10974946_10982371_10983160_10990702_10990848_11013746_11013907_11022867_11022980_11028680_11028819_11035639_11035787_11036417_11036689_11036984
transcript_177080.nic	chr7	+	1290	3	ISM	ENSG00000106443.17	ENST00000490957.5	4058	16	-571	80511	0	-32658	5prime_fragment	FALSE	canonical	3	125	junction_2	8	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGGAAGAAGAAGAAAATG	10972995	True	NA	7	True	ATTAAA	-9	NA	10973335	10982561	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_10974325_10974834_10974946_10982371
transcript_177081.nic	chr7	+	1356	3	ISM	ENSG00000106443.17	ENST00000490957.5	4058	16	-571	80445	0	-32592	5prime_fragment	FALSE	canonical	3	125	junction_2	8	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAAGGAGAAAGAGAAGG	10972995	True	NA	-5	True	AAAAAG	-24	NA	10973335	10982627	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_10974325_10974834_10974946_10982371
transcript_177082.known	chr7	+	12351	8	FSM	ENSG00000106460.19	ENST00000396668.8	12351	8	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_4	16.7502665223998	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTGCTATTTATATCAG	12208700	True	NA	NA	False	AATAAA	-18	NA	12211293	12243367	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_12211426_12214808_12215028_12218457_12218522_12224225_12224386_12229678_12229820_12230388_12230439_12231061_12231116_12231836
transcript_17709.known	chr1	-	6837	20	FSM	ENSG00000116406.20	ENST00000318130.13	6837	20	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_7	9.22750315114724	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGATCCAGCGCTTGCTC	-184752497	True	NA	NA	False	AATAAA	-21	NA	184754858	184690236	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_184694473_184702810_184702997_184706642_184706809_184708152_184708345_184710393_184710548_184711722_184711878_184712432_184712599_184716887_184717013_184717539_184717624_184719161_184719246_184719442_184719569_184721288_184721387_184723750_184723857_184726254_184726390_184732836_184732991_184734530_184734644_184737024_184737065_184737610_184737712_184749546_184749593_184754488
transcript_177109.known	chr7	+	9682	16	FSM	ENSG00000006747.15	ENST00000297029.10	9682	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	3.88501394248892	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTT	12570675	True	NA	NA	False	AATAAA	-22	NA	12570719	12660182	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_12570986_12578063_12578219_12581059_12581222_12604513_12604664_12622800_12622894_12625009_12625143_12625761_12625851_12626583_12626800_12629100_12629223_12636044_12636136_12640346_12640518_12644137_12644316_12644583_12644706_12649466_12649545_12651840_12651902_12652587
transcript_17711.known	chr1	-	6678	21	FSM	ENSG00000116406.20	ENST00000367512.8	6678	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	21.6296093353532	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTGAATTTTTAGAATCA	-184752546	False	NA	-6	True	AATAAA	-27	NA	184754907	184690492	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_184694473_184701496_184701545_184702810_184702997_184706642_184706809_184708152_184708345_184710393_184710548_184711722_184711878_184712432_184712599_184716887_184717013_184717539_184717624_184719161_184719246_184719442_184719569_184721288_184721387_184723750_184723857_184726254_184726390_184732836_184732991_184734530_184734644_184737024_184737065_184737610_184737712_184749546_184749593_184754488
transcript_177111.known	chr7	+	2569	15	FSM	ENSG00000006747.15	ENST00000341757.9	2569	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	4.32128098921548	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAATTAA	NA	False	NA	NA	False	NA	NA	NA	12570576	12653104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_12570986_12578063_12578219_12581059_12581222_12604513_12604664_12622800_12622894_12625009_12625143_12625761_12625851_12626583_12626800_12629100_12629223_12636044_12636136_12640346_12640518_12644583_12644706_12649466_12649545_12651840_12651902_12652587
transcript_177112.known	chr7	+	1147	2	FSM	ENSG00000122644.13	ENST00000356797.7	1147	2	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTAGTGTTTTGTGCT	12685625	False	NA	13	True	AATAAA	-14	NA	12686907	12689176	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_12687044_12688165
transcript_177117.known	chr7	+	1144	2	FSM	ENSG00000122644.13	ENST00000396664.2	1144	2	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTAGTGTTTTGTGCT	12685625	False	NA	13	True	AATAAA	-14	NA	12686907	12689176	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_12687044_12688168
transcript_177119.known	chr7	+	840	2	FSM	ENSG00000122644.13	ENST00000404894.1	840	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGAAGAGTGTCTACAGCG	12686568	True	NA	NA	False	NA	NA	NA	12687634	12688914	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_12687729_12688168
transcript_177127.known	chr7	+	431	2	FSM	ENSG00000213875.3	ENST00000436455.1	431	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGACAAAGTAATCTTATATA	NA	False	NA	NA	False	AATACA	-27	NA	13871855	13872513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_13872197_13872423
transcript_177129.known	chr7	-	6459	14	FSM	ENSG00000006468.14	ENST00000430479.6	6459	14	0	0	0	0	multi-exon	FALSE	non_canonical	3	49	junction_13	47.6307294772245	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGACTGTCGTGATCAC	-13983925	True	NA	-1	True	AATAAA	-18	NA	13989666	13891228	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_13896088_13900737_13900840_13906429_13906600_13909631_13909701_13911238_13911308_13931501_13931750_13935707_13935897_13939116_13939247_13977426_13977481_13986637_13986686_13988085_13988174_13989007_13989140_13989267_13989465_13989562
transcript_177134.known	chr7	-	3391	13	FSM	ENSG00000006468.14	ENST00000405218.6	3391	13	0	0	0	0	multi-exon	FALSE	non_canonical	3	75	junction_12	33.4168744798193	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTTTTTGTTCTGTTTT	-13989937	False	NA	-10	True	TTTAAA	-6	NA	13989947	13894380	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_13896088_13900737_13900840_13906429_13906600_13909631_13909701_13911238_13911308_13931501_13931750_13935707_13935897_13939116_13939247_13977426_13977481_13986637_13986686_13988085_13988174_13989007_13989140_13989562
transcript_177139.known	chr7	-	4181	12	FSM	ENSG00000006468.14	ENST00000405358.8	4181	12	0	0	0	0	multi-exon	FALSE	non_canonical	3	18	junction_11	50.6832653686575	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTGTTTTGAATTTCT	-13988863	False	811	-7	True	AATAAA	-24	NA	13988873	13893267	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_13896088_13900737_13900840_13906429_13906600_13909631_13909701_13911238_13911308_13931501_13931750_13935707_13935897_13939116_13939247_13977426_13977481_13986637_13986686_13988085_13988174_13988679
transcript_17714.known	chr1	-	6884	14	FSM	ENSG00000135842.17	ENST00000367511.4	6884	14	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	3.64553711109932	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGACCAGATGTCATTT	-184973629	True	NA	-6	True	AATAAA	-16	NA	184974508	184791031	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_184796098_184798078_184798191_184803584_184803693_184805945_184806057_184808073_184808236_184818637_184818826_184823166_184823330_184823637_184823743_184831846_184831963_184884632_184884801_184890107_184890223_184894074_184894207_184899178_184899310_184974301
transcript_177143.nnic	chr7	-	3186	12	NNC	ENSG00000006468.14	novel	4181	12	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	55.7485499941145	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTCTAAACACAAAGTCAAAA	-13988889	False	NA	NA	False	AAAAAG	-17	NA	13988899	13894154	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_13896088_13900737_13900840_13906429_13906600_13909631_13909701_13911238_13911308_13931501_13931750_13935707_13935897_13939116_13939247_13977426_13977481_13986637_13986686_13988085_13988174_13988813
transcript_177149.known	chr7	-	3363	10	FSM	ENSG00000006468.14	ENST00000403527.5	3363	10	0	0	0	0	multi-exon	FALSE	non_canonical	3	14	junction_9	56.8131005584252	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTCTAAACACAAAGTCAAAA	-13986504	False	NA	NA	False	AAAAAG	-17	NA	13986514	13894154	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_13896088_13900737_13900840_13906429_13906600_13909631_13909701_13911238_13911308_13931501_13931750_13935707_13935897_13939116_13939247_13977426_13977481_13986115
transcript_177161.known	chr7	-	546	3	FSM	ENSG00000006468.14	ENST00000433547.1	546	3	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	56	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTGTAACGAGAAACCAAC	-13983925	True	NA	NA	False	TTTAAA	-39	NA	13989666	13988158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_13988174_13989007_13989140_13989267
transcript_177165.known	chr7	-	2489	10	FSM	ENSG00000106524.9	ENST00000306999.7	2489	10	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	10.2306728354819	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTCATCTTGTTTTATAA	-16644654	True	NA	NA	False	AATAAA	-20	NA	16645754	16599778	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_16600946_16602379_16602510_16604720_16604850_16609629_16609766_16610548_16610764_16615743_16615905_16624982_16625082_16627039_16627179_16636390_16636456_16645506
transcript_177167.known	chr7	-	1270	9	FSM	ENSG00000106524.9	ENST00000628652.1	1270	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	23.5978680181071	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCATGTGAGAAAGTGTAT	-16644717	True	NA	NA	False	NA	NA	NA	16645817	16603645	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_16603661_16604720_16604850_16609629_16609766_16610548_16610764_16615743_16615905_16624982_16625082_16627039_16627179_16636390_16636456_16645506
transcript_177168.known	chr7	+	1804	12	FSM	ENSG00000136261.16	ENST00000258761.8	1804	12	0	0	0	0	multi-exon	FALSE	canonical	3	476	junction_1	89.5677406508016	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGGCTTATATTGTCAGA	16638308	True	NA	17	True	AATAAA	-15	NA	16646180	16706517	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_16646289_16665436_16665502_16674411_16674589_16681300_16681405_16682779_16682846_16685904_16686041_16689796_16689907_16694833_16695005_16696914_16697062_16698047_16698187_16704546_16704670_16706059
transcript_177170.known	chr7	+	1405	11	FSM	ENSG00000136261.16	ENST00000415365.5	1405	11	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	189.658139820046	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAAGGTATGATTCTGTT	16638258	True	NA	13	True	AAGAAA	-25	NA	16646130	16704662	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_16646305_16665436_16665502_16674411_16674589_16681300_16681405_16682779_16682846_16685904_16686041_16689796_16689907_16694833_16695005_16696914_16697062_16698047_16698187_16704546
transcript_177172.known	chr7	+	1711	11	FSM	ENSG00000136261.16	ENST00000437745.5	1711	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	269.45131285633	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATATTGTCAGAGCTTTT	16638287	True	NA	23	True	AATAAA	-21	NA	16646159	16706523	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_16646305_16665436_16665502_16674411_16674589_16681300_16681405_16682779_16682846_16689796_16689907_16694833_16695005_16696914_16697062_16698047_16698187_16704546_16704670_16706059
transcript_177174.known	chr7	+	1689	11	FSM	ENSG00000136261.16	ENST00000405202.5	1689	11	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	218.861051811418	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAACCAGTTTTTTAAAATA	16638322	True	NA	-19	True	NA	NA	NA	16646194	16706481	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_16646289_16674411_16674589_16681300_16681405_16682779_16682846_16685904_16686041_16689796_16689907_16694833_16695005_16696914_16697062_16698047_16698187_16704546_16704670_16706059
transcript_177184.known	chr7	+	1873	6	FSM	ENSG00000106537.8	ENST00000262067.5	1873	6	0	0	0	0	multi-exon	FALSE	canonical	3	465	junction_2	21.301643129111	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTGAGGTGGAATTCTT	16751518	True	NA	28	True	ATTAAA	-30	NA	16753754	16784536	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_16754031_16776210_16776379_16777041_16777123_16777797_16777912_16779002_16779117_16783416
transcript_177187.known	chr7	-	6357	26	FSM	ENSG00000071189.21	ENST00000428135.7	6357	26	0	0	0	0	multi-exon	TRUE	canonical	3	93	junction_13	16.5987951369971	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTTGAGTTCATTTAA	-17937124	True	NA	-14	True	AATAAA	-14	NA	17940494	17790760	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_17794293_17796826_17796940_17798689_17798759_17799008_17799155_17801587_17801660_17803418_17803581_17814833_17814945_17816181_17816290_17821508_17821649_17826021_17826092_17830009_17830048_17834051_17834185_17834760_17834866_17839806_17840001_17845594_17845695_17850346_17850436_17850825_17850965_17868406_17868491_17873527_17873617_17875479_17875582_17875668_17875791_17890362_17890485_17891545_17891636_17893331_17893435_17897333_17897447_17940283
transcript_17719.known	chr1	+	3407	7	FSM	ENSG00000121481.11	ENST00000367510.8	3407	7	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_1	34.5253530032641	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTAGCAACCTCTATTCT	185043389	True	NA	NA	False	ATTAAA	-25	NA	185045557	185102603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_185045650_185087551_185087641_185091578_185091740_185093060_185093277_185098071_185098345_185099790_185099963_185100199
transcript_177194.nic	chr7	-	2133	19	ISM	ENSG00000071189.21	ENST00000428135.7	6357	26	-19	25459	-12	0	5prime_fragment	FALSE	canonical	3	93	junction_6	18.981147241863	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGAAAAGAGAAAAAAGGAT	-17937143	False	NA	NA	False	AAAAAG	-29	NA	17940513	17816219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_17816290_17821508_17821649_17826021_17826092_17830009_17830048_17834051_17834185_17834760_17834866_17839806_17840001_17845594_17845695_17850346_17850436_17850825_17850965_17868406_17868491_17873527_17873617_17875479_17875582_17875668_17875791_17890362_17890485_17891545_17891636_17893331_17893435_17897333_17897447_17940283
transcript_177196.known	chr7	-	4146	6	FSM	ENSG00000071189.21	ENST00000409604.1	4146	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	53.8568472898294	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGAATCATTACTTTTC	-17937114	True	NA	NA	False	AATAAA	-28	NA	17940484	17879426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_17882944_17890362_17890485_17891545_17891636_17893331_17893435_17897333_17897447_17940283
transcript_177197.known	chr7	+	2420	1	FSM	ENSG00000279048.1	ENST00000625121.1	2420	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCCTTGGTGTTGAAAG	NA	False	NA	NA	False	ATTAAA	-14	NA	17940502	17942922	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_17940500_17942900
transcript_177201.known	chr7	+	4239	12	FSM	ENSG00000048052.24	ENST00000405010.7	4239	12	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	20.6233439104716	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCTTTCATACACTTGGC	18494590	True	NA	7	True	AATAAA	-16	NA	18495745	18668843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_18495855_18496261_18496325_18585280_18585523_18590344_18590487_18591515_18591643_18593907_18594030_18629349_18629482_18634626_18634743_18644670_18644794_18647784_18647999_18648465_18648684_18666212
transcript_177203.known	chr7	+	4279	11	FSM	ENSG00000048052.24	ENST00000622668.4	4279	11	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	16.1418710191849	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATCCCCTTTCATACA	18494590	True	NA	1	True	AATAAA	-10	NA	18495745	18668837	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_18496024_18496261_18496325_18585280_18585523_18590335_18590487_18591515_18591643_18593907_18594030_18634626_18634743_18644670_18644794_18647784_18647999_18648465_18648684_18666212
transcript_177204.known	chr7	+	2359	11	FSM	ENSG00000048052.24	ENST00000428307.6	2359	11	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	20.8748652690263	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAATATATAGATGCAAA	18494600	True	NA	NA	False	AATACA	-7	NA	18495755	18667105	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_18495855_18496261_18496325_18585280_18585523_18590344_18590487_18591515_18591643_18593907_18594030_18634626_18634743_18644670_18644794_18647784_18647999_18648465_18648684_18666212
transcript_177206.known	chr7	-	3893	4	FSM	ENSG00000105849.6	ENST00000222567.6	3893	4	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	34.5350063944784	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGGCCTCTGATGTGA	-19708341	True	NA	-2	True	AATAAA	-21	NA	19709037	19695460	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_19698728_19700071_19700281_19704778_19704921_19708762
transcript_177222.nic	chr7	-	952	7	NIC	ENSG00000243004.7	novel	955	7	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	3	349	junction_2	184.517087435163	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTCTATTTATTTACT	-20121360	True	NA	-2	True	AATAAA	-14	NA	20125207	19918980	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_19919261_19919865_19919978_19960921_19960995_19968136_19968396_20028918_20028960_20045502_20045562_20125079
transcript_177224.nic	chr7	-	935	7	NIC	ENSG00000243004.7	novel	955	7	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	3	284	junction_3	206.772553519293	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTCTATTTATTTACT	-20121360	True	NA	-2	True	AATAAA	-14	NA	20125207	19918980	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_19919261_19919865_19919978_19960921_19960995_19968153_19968396_20028918_20028960_20045502_20045562_20125079
transcript_17724.known	chr1	+	1677	6	FSM	ENSG00000121481.11	ENST00000367509.8	1677	6	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	129.852839784119	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTTGAGAGTGCTTTTTT	185044999	False	NA	22	True	ATTAAA	-29	NA	185045525	185101057	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_185045650_185087551_185087641_185091578_185091740_185098071_185098345_185099790_185099963_185100199
transcript_177247.known	chr7	-	743	6	FSM	ENSG00000243004.7	ENST00000415499.5	743	6	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	246.862714884204	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACTCACAGTATCACAAAC	-20121315	True	NA	NA	False	TATAAA	-12	NA	20125162	19931070	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_19931299_19960921_19960995_19968136_19968396_20028918_20028960_20045502_20045562_20125079
transcript_177271.nnic	chr7	-	895	4	ISM	ENSG00000243004.7	ENST00000457921.6	955	7	-405	49156	-405	-24918	5prime_fragment	FALSE	canonical	3	319	junction_3	228.126183406367	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGTATTATGAAGGTGAA	-20123502	False	NA	14	True	AAAACA	-3	NA	20123521	19968136	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_19968396_20028918_20028960_20045502_20045562_20122985
transcript_177272.nic	chr7	-	487	4	ISM	ENSG00000243004.7	ENST00000415499.5	743	6	-45	37066	-45	-24918	5prime_fragment	FALSE	canonical	3	479	junction_3	160.51791177311	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGTATTATGAAGGTGAA	-20121360	True	NA	14	True	AAAACA	-3	NA	20125207	19968136	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_19968396_20028918_20028960_20045502_20045562_20125079
transcript_177282.known	chr7	-	566	4	ISM	ENSG00000243004.7	ENST00000457921.6	955	7	154879	0	121	0	3prime_fragment	FALSE	canonical	3	349	junction_2	57.5634915163731	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTCTATTTATTTACT	-19968172	True	NA	-2	True	AATAAA	-14	NA	19968237	19918980	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_19919261_19919865_19919978_19960921_19960995_19968136
transcript_177283.known	chr7	+	483	1	FSM	ENSG00000213860.4	ENST00000396599.2	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGGTGTTAAAAAAAAAAAA	20002695	False	NA	NA	False	NA	NA	NA	20002764	20003247	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_20002800_20003200
transcript_177295.known	chr7	-	304	4	FSM	ENSG00000183742.13	ENST00000471019.1	304	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAACTACTTGAAAAGAAA	-20215755	True	NA	NA	False	TTTAAA	-4	NA	20217357	20164368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_20164400_20170713_20170782_20198524_20198671_20217298
transcript_177300.known	chr7	-	2994	5	FSM	ENSG00000183742.13	ENST00000332878.8	2994	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	5.1720402163943	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAGAAAAGTGCCCTC	-20215802	True	NA	NA	False	AATACA	-33	NA	20217404	20140624	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_20141159_20154192_20154382_20158203_20160246_20161747_20161871_20217298
transcript_177305.known	chr7	+	740	5	FSM	ENSG00000233834.7	ENST00000430859.2	798	5	50	8	9	-5	multi-exon	FALSE	canonical	3	42	junction_1	16.4544826719043	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACAAATATATGTGTATG	20216931	False	NA	NA	False	ATTAAA	-23	NA	20217585	20221692	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_20217623_20217787_20217859_20218255_20218364_20219582_20219757_20221342
transcript_177307.known	chr7	+	667	4	FSM	ENSG00000233834.7	ENST00000439058.6	727	4	41	19	0	-16	multi-exon	FALSE	canonical	3	22	junction_1	25.31578339473	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCATTCCATTAACAAAT	20216922	True	NA	NA	False	ATTAAA	-12	NA	20217576	20221681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_20217623_20218255_20218364_20219582_20219757_20221342
transcript_177308.known	chr7	-	737	3	FSM	ENSG00000271133.6	ENST00000605357.6	840	3	100	3	96	2	multi-exon	FALSE	canonical	2	10	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGACTTGATTAATTTGT	-20331571	False	NA	NA	False	AATAAA	-20	NA	20331681	20328298	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_20328857_20329366_20329514_20331649
transcript_177313.known	chr7	-	3496	3	NNC	ENSG00000164651.18	novel	1714	3	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGGCCAGTTAATTTGTA	-20785010	True	NA	-8	True	AATAAA	-13	NA	20786886	20782282	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_20785329_20785454_20785796_20786777
transcript_17732.known	chr1	-	4361	15	FSM	ENSG00000121486.12	ENST00000367506.10	4361	15	0	0	0	0	multi-exon	TRUE	canonical	3	173	junction_13	14.2006395371936	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACGAGTTAAGGAAACCAG	-185155179	True	NA	-20	True	ATTAAA	-16	NA	185156953	185118100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_185120272_185120382_185120510_185123856_185123920_185124943_185125111_185128668_185128748_185137605_185137797_185139366_185139580_185139972_185140223_185143356_185143437_185143905_185144030_185145438_185145569_185147181_185147247_185150378_185150493_185151824_185151936_185156477
transcript_177320.known	chr7	-	3626	2	FSM	ENSG00000164651.18	ENST00000418710.3	3626	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGTTAATTTGTATTTT	-20785010	True	NA	-4	True	AATAAA	-17	NA	20786886	20782278	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_20785796_20786777
transcript_177323.known	chr7	+	5637	6	FSM	ENSG00000105866.15	ENST00000649633.1	5637	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	30.7115613409673	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTCACTTGTAAATTTT	21425724	False	NA	2	True	TATAAA	-14	NA	21428200	21514505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_21428259_21428681_21428793_21429288_21430844_21477078_21477308_21481923_21482124_21511021
transcript_177333.nic	chr7	+	1962	6	ISM	ENSG00000105877.19	ENST00000409508.8	14343	82	-37	336918	-37	3475	5prime_fragment	FALSE	canonical	3	13	junction_1	1.49666295470958	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCACCTTCCTCTGTGTC	21542408	True	NA	NA	False	TTTAAA	-5	NA	21543001	21564921	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_21543597_21545005_21545150_21558801_21558999_21559602_21559793_21561070_21561171_21564185
transcript_177345.known	chr7	-	2915	11	FSM	ENSG00000164649.20	ENST00000356195.9	2915	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_10	494.491698615861	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGCTTGTCAGTGGTA	-21934846	True	NA	-3	True	AATAAA	-25	NA	21945878	21900899	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_21902353_21902977_21903115_21904109_21904260_21905505_21905632_21906288_21906457_21906567_21906640_21908129_21908508_21911616_21911755_21916753_21916895_21940261_21940316_21945780
transcript_177355.nic	chr7	-	3177	10	NIC	ENSG00000164649.20	novel	2883	10	NA	NA	-295	0	combination_of_known_junctions	FALSE	canonical	3	543	junction_8	234.722268244571	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTGCTTGTCAGTGGT	NA	False	NA	-4	True	AATAAA	-24	NA	21946198	21900900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_21902353_21902977_21903115_21904109_21904260_21905505_21905632_21906288_21906457_21906567_21906640_21908129_21908508_21911616_21911752_21916753_21916895_21945780
transcript_177357.known	chr7	-	2883	10	FSM	ENSG00000164649.20	ENST00000406877.8	2883	10	0	0	0	0	multi-exon	FALSE	canonical	3	689	junction_8	192.731822892732	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCTTGTCAGTGGTAT	-21934867	True	NA	-2	True	AATAAA	-26	NA	21945899	21900898	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_21902353_21902977_21903115_21904109_21904260_21905505_21905632_21906288_21906457_21906567_21906640_21908129_21908508_21911616_21911755_21916753_21916895_21945780
transcript_177366.known	chr7	-	1830	9	FSM	ENSG00000164649.20	ENST00000373934.4	1830	9	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_7	382.070653642752	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAAGGGGACCATCAACA	-21934852	True	NA	NA	False	ATTAAA	-11	NA	21945884	21901798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_21902353_21902977_21903115_21904109_21904260_21905505_21905632_21906288_21906457_21906567_21906640_21908129_21908508_21916753_21916895_21945780
transcript_177382.known	chr7	-	569	5	FSM	ENSG00000164649.20	ENST00000447180.5	569	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	456.64209179619	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCACCAAGAAGCTGGCCAA	-21934846	True	NA	-74	True	NA	NA	NA	21945878	21908366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_21908508_21911616_21911752_21916753_21916895_21940261_21940316_21945780
transcript_177383.nic	chr7	-	660	4	NIC	ENSG00000164649.20	novel	569	5	NA	NA	-32	-78	combination_of_known_junctions	FALSE	canonical	3	543	junction_2	309.562056245055	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAATTCTTGAAAGAAAGAAA	-21945824	False	NA	14	True	NA	NA	NA	21945935	21908278	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_21908508_21911616_21911752_21916753_21916895_21945780
transcript_177384.nic	chr7	-	989	4	ISM	ENSG00000164649.20	ENST00000406877.8	2883	10	-362	7380	-358	-78	5prime_fragment	FALSE	canonical	3	689	junction_2	242.10511950161	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAATTCTTGAAAGAAAGAAA	NA	False	NA	14	True	NA	NA	NA	21946261	21908278	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_21908508_21911616_21911755_21916753_21916895_21945780
transcript_177387.known	chr7	-	1193	5	FSM	ENSG00000105889.16	ENST00000406890.6	1193	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	16.3859696081739	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTCGCATCTCTTAATT	-22499509	True	NA	-2	True	ATTAAA	-18	NA	22500177	22419443	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_22419837_22492564_22492730_22493323_22493780_22494771_22494887_22500113
transcript_177388.known	chr7	-	1261	5	FSM	ENSG00000105889.16	ENST00000678116.1	1261	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	10.256095748383	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTCGCATCTCTTAATT	-22499520	True	NA	-2	True	ATTAAA	-18	NA	22500188	22419443	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_22419837_22492564_22492730_22493323_22493837_22494771_22494887_22500113
transcript_177389.known	chr7	-	514	4	FSM	ENSG00000196683.12	ENST00000372879.8	514	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	3166.90830657002	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTTGAGTCTTTTTTGA	-22769746	True	NA	-3	True	AATAAA	-16	NA	22822791	22812972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_22813186_22817411_22817549_22817999_22818049_22822676
transcript_177393.known	chr7	-	434	3	FSM	ENSG00000196683.12	ENST00000358435.9	434	3	0	0	0	0	multi-exon	FALSE	canonical	3	6741	junction_2	142.5	1487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGCTTGAGTCTTTTTTG	-22769804	True	NA	-4	True	AATAAA	-15	NA	22822849	22812973	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_22813186_22817999_22818049_22822676
transcript_177396.known	chr7	-	731	2	FSM	ENSG00000196683.12	ENST00000463284.2	731	2	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCCTGGCGGCTCTGTTGC	-22769804	True	NA	NA	False	AATAAA	-1	NA	22822849	22812627	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_22813186_22822676
transcript_177399.known	chr7	+	1938	4	FSM	ENSG00000228649.10	ENST00000415611.8	1938	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	6.12825877028341	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGCATGGTTTATAACAA	NA	False	NA	NA	False	NA	NA	NA	22854125	22860274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_22854281_22856521_22856557_22856972_22857017_22858570
transcript_177400.known	chr7	+	1238	4	FSM	ENSG00000228649.10	ENST00000422542.4	1238	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	8.83176086632785	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTACAGATAAGCAGCTATT	NA	False	NA	NA	False	AATAAA	-24	NA	22854154	22861579	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_22854281_22856521_22856557_22856972_22857017_22860546
transcript_177403.known	chr7	+	619	3	FSM	ENSG00000228649.10	ENST00000671680.1	619	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	10	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTATAGTCTTTTTTTTTT	22854739	False	NA	NA	False	NA	NA	NA	22854762	22857354	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_22854965_22856521_22856557_22856972
transcript_177404.known	chr7	+	1743	3	FSM	ENSG00000228649.10	ENST00000667557.1	1743	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	7.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCCTTGGCATTTCAGTG	NA	False	NA	6	True	AATAAA	-20	NA	22854152	22858552	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_22854281_22856521_22856557_22856972
transcript_177408.known	chr7	-	3130	12	FSM	ENSG00000122591.13	ENST00000409923.5	3130	12	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	50.3041985990654	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAGAAATGTCTTTCTT	-22999301	True	NA	55	True	ACTAAA	-38	NA	23014084	22944508	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_22946164_22946951_22947248_22960255_22960416_22961234_22961323_22964414_22964532_22976209_22976306_22976692_22976809_22977340_22977422_22978268_22978449_22983943_22984046_22991060_22991140_23013924
transcript_177417.nic	chr7	-	2361	12	NIC	ENSG00000122591.13	novel	3130	12	NA	NA	-43	286	combination_of_known_junctions	FALSE	canonical	3	135	junction_1	70.3113500824243	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTTATGTCTCATGTGA	NA	False	NA	-4	True	AATAAA	-23	NA	23014173	22945285	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_22946164_22947032_22947248_22960255_22960416_22961234_22961323_22964414_22964532_22976209_22976306_22976692_22976809_22977340_22977422_22978268_22978449_22983943_22984046_22991060_22991140_23013924
transcript_177426.known	chr7	-	616	4	FSM	ENSG00000122591.13	ENST00000409763.1	616	4	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_1	30.4448499567478	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATGACTCATAGCCCAT	-22999291	True	NA	-1	True	AATAAA	-24	NA	23014074	22978163	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_22978449_22983943_22984046_22991060_22991140_23013924
transcript_177427.known	chr7	-	3995	3	FSM	ENSG00000122591.13	ENST00000467005.6	3995	3	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_1	14.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGTTTCCATGAAAAAAAAAA	-22999308	True	NA	NA	False	CATAAA	-7	NA	23014091	22980296	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_22984046_22991060_22991140_23013924
transcript_177428.known	chr7	-	3422	3	FSM	ENSG00000230658.2	ENST00000419813.2	3422	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	3	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAATTAATAAGCTGAAGTA	-23105692	False	NA	NA	False	NA	NA	NA	23105702	23100374	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_23103579_23104249_23104318_23105552
transcript_17743.nic	chr1	-	2126	12	ISM	ENSG00000121486.12	ENST00000367506.10	4361	15	-22	6739	-22	0	5prime_fragment	FALSE	canonical	3	173	junction_10	14.3992653623442	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTGTTTTTAGTAAATC	-185155201	True	NA	NA	False	AATAAA	-18	NA	185156975	185124839	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_185125111_185128668_185128748_185137605_185137797_185139366_185139580_185139972_185140223_185143356_185143437_185143905_185144030_185145438_185145569_185147181_185147247_185150378_185150493_185151824_185151936_185156477
transcript_177432.known	chr7	+	3165	12	FSM	ENSG00000122550.18	ENST00000521082.5	3165	12	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	230.072859462295	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACTCATTTCCTTCCTA	23093695	True	NA	7	True	AATAAA	-15	NA	23105757	23175302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_23106147_23117833_23117965_23123776_23123880_23124687_23124782_23125047_23125173_23140768_23140945_23143850_23144026_23152066_23152210_23165697_23165939_23167835_23168038_23172947_23173046_23174014
transcript_177440.known	chr7	+	5619	11	FSM	ENSG00000122550.18	ENST00000339077.10	5619	11	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_9	181.39749171364	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTCTATATTCCTTTTGC	23093722	True	NA	NA	False	AATAAA	-16	NA	23105784	23177914	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_23106147_23123776_23123880_23124687_23124782_23125047_23125173_23140768_23140945_23143850_23144026_23152066_23152210_23165697_23165939_23167835_23168038_23172947_23173046_23174014
transcript_177442.known	chr7	+	3231	11	FSM	ENSG00000122550.18	ENST00000409689.5	3231	11	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	222.444622322051	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTGATAATATTAAATATT	23106269	False	NA	-23	True	AATGAA	-31	NA	23106294	23175388	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_23106795_23123776_23123880_23124687_23124782_23125047_23125173_23140768_23140945_23143850_23144026_23152066_23152210_23165697_23165939_23167835_23168038_23172947_23173046_23174014
transcript_177456.known	chr7	+	1233	6	FSM	ENSG00000122550.18	ENST00000410047.1	1233	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	353.911288319545	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATATGCTAGCATCACT	23106265	True	NA	11	True	AATAAA	-14	NA	23106297	23126043	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_23106795_23117833_23117965_23123776_23123880_23124687_23124782_23125047_23125173_23125760
transcript_177457.known	chr7	+	969	5	FSM	ENSG00000122550.18	ENST00000322275.9	969	5	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_4	207.588986942949	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATATGCTAGCATCACTAC	23093722	True	NA	13	True	AATAAA	-16	NA	23105784	23126045	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_23106147_23123776_23123880_23124687_23124782_23125047_23125173_23125760
transcript_177459.known	chr7	+	588	5	FSM	ENSG00000122550.18	ENST00000479700.1	588	5	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	338.832831201464	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTCCAAGACCCCCAGTGA	23106464	True	NA	NA	False	AATGAA	-44	NA	23106655	23125887	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_23106795_23123776_23123880_23124687_23124782_23125047_23125173_23125760
transcript_17746.nic	chr1	-	1123	6	ISM	ENSG00000121486.12	ENST00000367506.10	4361	15	-117	25819	2	0	5prime_fragment	FALSE	canonical	3	173	junction_4	13.9283882771841	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAAACTAAATCGGTAAGA	-185157054	True	NA	NA	False	AAAACA	-22	NA	185157070	185143919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_185144030_185145438_185145569_185147181_185147247_185150378_185150493_185151824_185151936_185156477
transcript_177462.known	chr7	+	1329	8	FSM	ENSG00000136243.18	ENST00000413919.1	1329	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	72.8588235100273	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATTAAAGCCTCCACCTC	23178994	True	NA	NA	False	AAGAAA	-18	NA	23182063	23200705	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_23182207_23185069_23185299_23187051_23187147_23195838_23195916_23196679_23196767_23197172_23197248_23199457_23199543_23200167
transcript_177464.known	chr7	+	1571	7	FSM	ENSG00000136243.18	ENST00000258742.10	1571	7	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_3	15.9756759550957	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCACTTTACTGTCTCACA	23178978	True	NA	10	True	AATAAA	-18	NA	23182047	23201006	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_23182207_23185069_23185299_23187051_23187147_23195838_23195916_23196679_23196767_23199457_23199543_23200167
transcript_177466.known	chr7	+	2010	7	FSM	ENSG00000136243.18	ENST00000485250.5	2010	7	0	0	0	0	multi-exon	TRUE	canonical	2	16	junction_1	54.3588896951445	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAATGGAACTGAAAAAT	23181830	False	NA	-41	True	AAAAAG	-44	NA	23181840	23200955	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_23182490_23185069_23185299_23187051_23187147_23195838_23195916_23196679_23196767_23199457_23199543_23200167
transcript_177468.nnic	chr7	+	1566	6	NIC	ENSG00000136243.18	novel	1571	7	NA	NA	-48	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	63.480390673026	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCACTTTACTGTCTCACA	23178906	True	NA	10	True	AATAAA	-18	NA	23181975	23201006	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_23182207_23185069_23185299_23187051_23187147_23196679_23196767_23199457_23199543_23200167
transcript_177469.known	chr7	+	1285	6	FSM	ENSG00000136243.18	ENST00000437140.5	1285	6	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	58.2635391990566	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAATTATGCACGAATA	23178996	True	NA	-29	True	NA	NA	NA	23182065	23200967	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_23182207_23187051_23187147_23195838_23195916_23196679_23196767_23199457_23199543_23200167
transcript_17747.known	chr1	+	3838	19	FSM	ENSG00000116668.13	ENST00000367500.9	3838	19	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	8.82634244677003	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCACTAGTTGGTGTAGA	185156520	True	NA	3	True	AATAAA	-18	NA	185157166	185291781	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_185157315_185160832_185160926_185166571_185166653_185168339_185168399_185174371_185175114_185180390_185180451_185181945_185182058_185184242_185184345_185184742_185184932_185190548_185190643_185202653_185202800_185204699_185204864_185206624_185206764_185214506_185214656_185221848_185222037_185231576_185231709_185271322_185271390_185276603_185276669_185290673
transcript_177475.nnic	chr7	+	2136	4	NNC	ENSG00000136243.18	novel	680	4	NA	NA	-18	2597	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	86.6140866141299	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGATACTACTTTTGCCC	23181812	False	NA	NA	False	AATAAA	-26	NA	23181822	23190816	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_23182207_23185069_23185299_23187051_23187643_23189884
transcript_177477.known	chr7	+	2259	1	FSM	ENSG00000226816.3	ENST00000413042.3	2259	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATTTGTGACTCT	NA	False	NA	NA	False	NA	NA	NA	23205786	23208045	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_23205800_23208000
transcript_177478.known	chr7	+	808	2	FSM	ENSG00000136235.17	ENST00000468723.1	808	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTAACCCAGGTTAACTG	23273192	True	NA	NA	False	NA	NA	NA	23273292	23274550	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_23273615_23274064
transcript_177490.known	chr7	-	4274	15	FSM	ENSG00000136231.14	ENST00000258729.8	4274	15	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_12	11.9991496297335	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTTGTGTAGTATGTTT	-23448675	True	NA	-27	True	AATAAA	-22	NA	23470491	23310208	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_23312461_23312734_23312849_23313521_23313654_23317638_23317714_23319137_23319255_23342063_23342190_23343717_23343854_23345939_23346063_23347599_23347735_23351304_23351587_23361533_23361598_23361689_23361742_23418775_23418825_23468481_23468543_23469935
transcript_177519.nic	chr7	-	1816	13	ISM	ENSG00000136231.14	ENST00000258729.8	4274	15	-2	3407	-2	-1243	5prime_fragment	FALSE	canonical	3	115	junction_10	12.3048657945636	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGTTAGTCCTAAAGAAG	-23470265	False	NA	NA	False	ATTAAA	-9	NA	23470493	23313615	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_23313654_23317638_23317714_23319137_23319255_23342063_23342190_23343717_23343854_23345939_23346063_23347599_23347735_23351304_23351587_23361533_23361598_23361689_23361742_23418775_23418825_23468481_23468543_23469935
transcript_177546.nnic	chr7	-	3668	8	NIC	ENSG00000136231.14	novel	4274	15	NA	NA	-169	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	53.9436591950058	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGTGCAGCTTGTTGTGT	-23470432	False	NA	-36	True	AATAAA	-13	NA	23470660	23310217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_23312461_23312734_23312849_23313521_23313654_23317638_23317714_23319137_23319255_23342063_23342190_23343717_23343854_23469935
transcript_177551.nnic	chr7	-	2494	8	NIC	ENSG00000136231.14	novel	4274	15	NA	NA	-23	12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	53.9436591950058	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGACTCCACCTTAAGTAG	-23448567	True	NA	NA	False	ATTAAA	-10	NA	23470383	23311114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_23312461_23312734_23312849_23313521_23313654_23317638_23317714_23319137_23319255_23342063_23342190_23343717_23343854_23469935
transcript_177553.known	chr7	+	2905	4	FSM	ENSG00000156928.5	ENST00000466681.2	2905	4	0	0	0	0	multi-exon	FALSE	canonical	3	580	junction_3	57.659922534345	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAAGTATATAAAATTTT	23289222	True	NA	NA	False	TTTAAA	-35	NA	23299338	23311729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_23299609_23300838_23301018_23307867_23307950_23309355
transcript_177556.known	chr7	+	625	2	FSM	ENSG00000156928.5	ENST00000481564.1	625	2	0	0	0	0	multi-exon	FALSE	canonical	3	716	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCCAGCCCTATTGAGT	23289224	True	NA	NA	False	NA	NA	NA	23299340	23301195	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_23299609_23300838
transcript_177557.known	chr7	+	892	1	FSM	ENSG00000232818.2	ENST00000439199.1	892	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTTTTATGCAAGAAAAAT	23490326	True	NA	NA	False	NA	NA	NA	23490472	23491364	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_23490500_23491400
transcript_177559.known	chr7	-	2229	10	FSM	ENSG00000164548.12	ENST00000392502.8	2229	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	231.033427114875	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGGATTGTCTCTTTA	-23517814	False	NA	-8	True	AATAAA	-15	NA	23532041	23504783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_23505570_23505745_23505811_23506137_23506267_23507419_23507536_23512893_23513083_23516362_23516529_23521706_23521841_23522131_23522433_23531180_23531271_23531788
transcript_17756.known	chr1	-	3657	16	FSM	ENSG00000116679.16	ENST00000459929.5	3657	16	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_8	512.507543575919	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGTGTCTAATGTGTAG	-185296895	True	NA	-1	True	GATAAA	-15	NA	185317273	185297014	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_185298289_185299709_185299884_185299998_185300131_185300216_185300344_185300436_185300559_185300971_185301197_185301433_185301564_185305535_185305644_185306484_185306626_185307013_185307140_185307488_185307663_185308799_185308876_185309002_185309173_185309382_185309512_185311094_185311323_185316952
transcript_177562.known	chr7	-	2142	9	FSM	ENSG00000164548.12	ENST00000538367.6	2142	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	204.774533023518	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGGATTGTCTCTTTA	-23517814	False	NA	-8	True	AATAAA	-15	NA	23532041	23504783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_23505570_23505745_23505814_23506137_23506267_23507419_23507536_23512893_23513083_23516362_23516529_23521706_23521841_23522131_23522433_23531788
transcript_177563.nic	chr7	-	1920	9	NIC	ENSG00000164548.12	novel	2142	9	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	202.70976789489	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATTGTCTCTTTATTGT	-23517810	True	NA	-4	True	AATAAA	-19	NA	23532037	23504779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_23505570_23505745_23505814_23506137_23506267_23507419_23507536_23512893_23513083_23516362_23516529_23521706_23521841_23522353_23522433_23531788
transcript_177564.known	chr7	-	1931	9	FSM	ENSG00000164548.12	ENST00000621813.4	1931	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	217.685804256961	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGGATTGTCTCTTTA	-23517814	False	NA	-8	True	AATAAA	-15	NA	23532041	23504783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_23505570_23505745_23505814_23506137_23506267_23507419_23507536_23512893_23513083_23516362_23516529_23521706_23521841_23531180_23531271_23531788
transcript_177565.nic	chr7	-	1701	9	NIC	ENSG00000164548.12	novel	2142	9	NA	NA	4	-215	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	202.70976789489	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAAGTGTGATTTTTTTTG	-23517810	True	NA	-34	True	AATACA	-19	NA	23532037	23504998	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_23505570_23505745_23505814_23506137_23506267_23507419_23507536_23512893_23513083_23516362_23516529_23521706_23521841_23522353_23522433_23531788
transcript_177567.known	chr7	-	1785	8	FSM	ENSG00000164548.12	ENST00000297071.9	1785	8	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_7	84.8997007278204	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATTGTCTCTTTATTGT	-23517754	True	NA	-4	True	AATAAA	-19	NA	23531981	23504779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_23505570_23505745_23505814_23506137_23506267_23507419_23507536_23512893_23513083_23516362_23516529_23521706_23521841_23531788
transcript_177573.known	chr7	-	1653	5	FSM	ENSG00000164548.12	ENST00000494255.5	1653	5	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_4	169.638402197144	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACTCTTTCTCAAAAAAG	-23517754	True	NA	NA	False	NA	NA	NA	23531981	23507156	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_23507536_23512893_23513083_23516362_23516529_23521706_23522433_23531788
transcript_177574.known	chr7	+	847	5	FSM	ENSG00000169193.12	ENST00000448353.5	847	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	17.1318416990118	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGCAGCCAACACCACCA	23596959	False	NA	NA	False	NA	NA	NA	23597514	23643024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_23597606_23597966_23598052_23604085_23604280_23611170_23611554_23642930
transcript_177576.known	chr7	+	2470	4	FSM	ENSG00000169193.12	ENST00000307471.8	2470	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	6.0184900284226	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTATTACAGTCTTTTT	23596826	True	NA	56	True	AATAAA	-19	NA	23597381	23644708	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_23597606_23597966_23598052_23611170_23611554_23642930
transcript_177578.known	chr7	+	625	3	FSM	ENSG00000169193.12	ENST00000484553.5	625	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	23.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCCATGTTTTTCTACT	23596860	True	NA	NA	False	AATAAA	-22	NA	23597415	23602220	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_23597606_23597966_23598052_23601870
transcript_177579.known	chr7	+	2324	3	FSM	ENSG00000169193.12	ENST00000409765.5	2324	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	12.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGTATTACAGTCTTTT	23596886	True	NA	55	True	AATAAA	-18	NA	23597441	23644707	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_23597606_23611170_23611554_23642930
transcript_177596.known	chr7	+	1403	7	FSM	ENSG00000188732.11	ENST00000344962.9	1403	7	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_4	78.39589700148	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTAGTGATATTACTGA	23677933	True	NA	16	True	AATAAA	-25	NA	23680198	23702650	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_23680284_23684498_23684673_23689268_23689460_23691389_23691597_23698191_23698300_23700785_23700869_23702095
transcript_177600.nnic	chr7	+	1675	7	NNC	ENSG00000188732.11	novel	1403	7	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	125.424612151417	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTAGTGATATTACTGA	23677863	True	NA	16	True	AATAAA	-25	NA	23680128	23702650	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_23680284_23682452_23682763_23684498_23684673_23689268_23689460_23691389_23691597_23700785_23700869_23702095
transcript_177602.known	chr7	+	761	6	FSM	ENSG00000188732.11	ENST00000409653.5	761	6	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	95.7613700820952	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATTGGAGAAATTAAAACC	23677918	True	NA	NA	False	NA	NA	NA	23680183	23702167	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_23680284_23689268_23689460_23691389_23691597_23698191_23698300_23700785_23700869_23702095
transcript_177605.known	chr7	+	888	6	FSM	ENSG00000188732.11	ENST00000409192.7	888	6	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_4	68.6952691238633	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATTAAAACCATCATCC	23677864	True	NA	NA	False	NA	NA	NA	23680129	23702174	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_23680284_23684498_23684673_23689268_23689460_23691389_23691597_23700785_23700869_23702095
transcript_177609.known	chr7	+	1136	5	FSM	ENSG00000188732.11	ENST00000409994.3	1136	5	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	96.8952398211594	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTAGTGATATTACTGA	23677918	True	NA	16	True	AATAAA	-25	NA	23680183	23702650	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_23680284_23689268_23689460_23691389_23691597_23700785_23700869_23702095
transcript_177611.known	chr7	+	565	3	FSM	ENSG00000122585.8	ENST00000405982.1	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	3	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATGTGTGTTTAAATAA	24285031	True	NA	-19	True	NA	NA	NA	24285106	24291824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_24285429_24289498_24289580_24291662
transcript_177614.known	chr7	+	8346	12	FSM	ENSG00000105926.16	ENST00000222644.10	8346	12	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	35.8873351817362	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTATTGATTTTTCAGA	24573071	True	NA	NA	False	AATAAA	-18	NA	24573451	24694193	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_24573594_24623665_24623785_24641715_24641869_24649611_24649765_24650484_24650713_24663589_24663722_24665587_24665688_24666020_24666090_24668498_24668661_24679130_24679334_24680391_24680521_24687437
transcript_177617.known	chr7	+	1703	11	FSM	ENSG00000105926.16	ENST00000409761.5	1703	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	83.736730292029	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGAAAATTAAACTCTTAA	24572060	False	NA	-52	True	NA	NA	NA	24573414	24687632	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_24573594_24641715_24641869_24649611_24649765_24650484_24650713_24663589_24663722_24665587_24665688_24666020_24666090_24668498_24668661_24679130_24679334_24680391_24680521_24687437
transcript_177619.nic	chr7	+	1284	8	ISM	ENSG00000105926.16	ENST00000222644.10	8346	12	-217	28133	-33	0	5prime_fragment	FALSE	canonical	3	194	junction_1	34.4957850131501	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATGTATCTCACAACCA	24573222	False	NA	32	True	AAAAAG	-6	NA	24573234	24666060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_24573594_24623665_24623785_24641715_24641869_24649611_24649765_24650484_24650713_24663589_24663722_24665587_24665688_24666020
transcript_177620.known	chr7	+	1191	8	FSM	ENSG00000105926.16	ENST00000430180.5	1191	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	88.0315342386361	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATGTATCTCACAACCA	24573991	False	NA	32	True	AAAAAG	-6	NA	24574012	24666060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_24574279_24623665_24623785_24641715_24641869_24649611_24649765_24650484_24650713_24663589_24663722_24665587_24665688_24666020
transcript_177624.known	chr7	+	982	5	FSM	ENSG00000105926.16	ENST00000432190.5	982	5	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	93.2694349720207	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAGTAATAAAATTTTTGG	24573114	False	NA	NA	False	NA	NA	NA	24573267	24650712	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_24573594_24623662_24623785_24641715_24641869_24649611_24649765_24650484
transcript_177627.known	chr7	-	2250	10	FSM	ENSG00000105928.16	ENST00000645220.1	2250	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	8.55050355892044	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTTTGCTTTTTATTCT	-24756833	True	NA	-4	True	ATTAAA	-18	NA	24757464	24698354	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_24699260_24702759_24702834_24706183_24706377_24708126_24708255_24710223_24710389_24717253_24717375_24719046_24719219_24744561_24744755_24749563_24749794_24757395
transcript_177634.known	chr7	-	6749	23	FSM	ENSG00000070882.13	ENST00000313367.7	6749	23	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_12	19.9771046636844	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCACTTTTGTCTTTGTTT	-24978422	True	NA	-4	True	AATAAA	-16	NA	24980178	24796539	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_24800280_24804314_24804438_24806775_24806903_24809806_24809952_24815058_24815204_24816609_24816689_24820174_24820239_24830767_24830906_24834485_24834737_24840689_24840784_24842278_24842414_24849068_24849177_24852503_24852635_24861612_24861770_24863199_24863293_24863495_24863600_24865341_24865466_24866069_24866238_24870731_24870846_24871741_24871796_24871952_24872070_24892376_24892622_24979885
transcript_177639.nic	chr7	-	3311	22	NIC	ENSG00000070882.13	novel	6749	23	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_11	14.7744953986833	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTCATGTGTGGGTTAA	-24978477	True	NA	-6	True	AATAAA	-13	NA	24980233	24799924	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_24800280_24804314_24804438_24806775_24806903_24809806_24809952_24815058_24815204_24816609_24816689_24820174_24820239_24830767_24830906_24834485_24834737_24840689_24840784_24842278_24842414_24852503_24852635_24861612_24861770_24863199_24863293_24863495_24863600_24865341_24865466_24866069_24866238_24870731_24870846_24871741_24871796_24871952_24872070_24892376_24892622_24979885
transcript_17764.known	chr1	-	4113	15	FSM	ENSG00000116679.16	ENST00000367498.8	4113	15	0	0	0	0	multi-exon	TRUE	canonical	3	1506	junction_11	80.8084154033477	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGAGATCACTTCTCAT	-185296865	True	NA	-16	True	AATAAA	-28	NA	185317243	185296387	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_185298289_185299709_185299884_185299998_185300131_185300216_185300344_185300436_185300559_185300971_185301197_185301433_185301564_185305535_185305644_185307013_185307140_185307488_185307663_185308799_185308876_185309002_185309173_185309382_185309512_185311094_185311323_185316952
transcript_177647.known	chr7	-	974	3	FSM	ENSG00000172115.9	ENST00000409409.5	974	3	0	0	0	0	multi-exon	FALSE	canonical	2	62	junction_2	1520.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCAAGATTCACCTGTGT	-25039190	True	NA	NA	False	AATATA	-38	NA	25125249	25123306	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_25123850_25123950_25124128_25124995
transcript_177648.known	chr7	-	5432	3	FSM	ENSG00000172115.9	ENST00000305786.7	5432	3	0	0	0	0	multi-exon	FALSE	canonical	3	3103	junction_1	213	1534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACCAGATGCCTGTTTT	-25039201	True	NA	-9	True	AATAAA	-17	NA	25125260	25118655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_25123850_25123950_25124128_25125199
transcript_177654.known	chr7	-	2438	14	FSM	ENSG00000122566.22	ENST00000676746.1	2438	14	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	4115.03024642518	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGCACTGTATATTCA	-26200997	False	NA	-19	True	AATAAA	-9	NA	26201047	26189940	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_26190461_26190992_26191129_26191421_26191651_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
transcript_177655.known	chr7	-	2656	13	FSM	ENSG00000122566.22	ENST00000678935.1	2656	13	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	3828.05505718417	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGCACTGTATATTCA	-26201251	False	NA	-19	True	AATAAA	-9	NA	26201301	26189940	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_26190461_26190992_26191129_26191421_26191651_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_177656.known	chr7	-	3522	13	FSM	ENSG00000122566.22	ENST00000678431.1	3522	13	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_2	3355.02498334795	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTATGCACTGTATATT	-26201431	False	NA	-21	True	AATAAA	-7	NA	26201481	26189942	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_26190461_26190992_26191129_26191421_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_177657.known	chr7	-	2463	13	FSM	ENSG00000122566.22	ENST00000678697.1	2463	13	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	3377.0898673595	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTATGCACTGTATATT	-26201251	False	NA	-21	True	AATAAA	-7	NA	26201301	26189942	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_26190461_26190992_26191129_26192300_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_177658.known	chr7	-	1724	13	FSM	ENSG00000122566.22	ENST00000360787.8	1724	13	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_2	3874.65740689849	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGGTGTAATGTTTACA	-26115624	True	NA	-1	True	AATAAA	-18	NA	26200746	26190124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_26190461_26190992_26191129_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
transcript_177660.known	chr7	-	4044	13	FSM	ENSG00000122566.22	ENST00000679123.1	4044	13	0	0	0	0	multi-exon	FALSE	canonical	3	786	junction_1	3511.78146861865	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAAGACCAGGTTAATT	-26201180	True	NA	38	True	AAGAAA	-2	NA	26201397	26189665	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_26190461_26190992_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
transcript_177661.known	chr7	-	3706	13	FSM	ENSG00000122566.22	ENST00000679001.1	3706	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3637.31457717549	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGCACTGTATATTCA	-26201180	True	NA	-19	True	AATAAA	-9	NA	26201397	26189940	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_26190461_26191055_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
transcript_177667.known	chr7	-	2731	13	FSM	ENSG00000122566.22	ENST00000678675.1	2731	13	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	3912.71564812159	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGCACTGTATATTCA	-26200997	False	NA	-19	True	AATAAA	-9	NA	26201047	26189940	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_26190461_26190992_26191651_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
transcript_177678.known	chr7	-	3850	12	FSM	ENSG00000122566.22	ENST00000679021.1	3850	12	0	0	0	0	multi-exon	FALSE	canonical	3	786	junction_1	3556.63194284417	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAAGACCAGGTTAATT	-26200997	False	NA	38	True	AAGAAA	-2	NA	26201047	26189665	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_26190461_26190992_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
transcript_177679.known	chr7	-	2348	12	FSM	ENSG00000122566.22	ENST00000678779.1	2348	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3517.157746188	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATAAAATGCTGTTCATT	-26201251	False	NA	-35	True	NA	NA	NA	26201301	26189956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_26190461_26191055_26191129_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_177680.known	chr7	-	3754	12	FSM	ENSG00000122566.22	ENST00000678449.1	3754	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2828.37831642559	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGCACTGTATATTCA	-26201431	False	NA	-19	True	AATAAA	-9	NA	26201481	26189940	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_26190461_26191055_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_177683.known	chr7	-	3622	12	FSM	ENSG00000122566.22	ENST00000679243.1	3622	12	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	2824.46117438704	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAAATACTTGGTGTAAT	-26201431	False	NA	-8	True	AATAAA	-11	NA	26201481	26190131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_26190457_26190992_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_177697.known	chr7	-	3664	12	FSM	ENSG00000122566.22	ENST00000354667.8	3664	12	0	0	0	0	multi-exon	FALSE	canonical	3	1575	junction_11	3045.63814371953	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGCGTTTGAGTACTC	-26115624	True	NA	-5	True	AATAAA	-23	NA	26200746	26189926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
transcript_177699.known	chr7	-	4068	11	FSM	ENSG00000122566.22	ENST00000677906.1	4068	11	0	0	0	0	multi-exon	FALSE	canonical	3	786	junction_1	2677.71443772483	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAAGACCAGGTTAATT	-26201251	False	NA	38	True	AAGAAA	-2	NA	26201301	26189665	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_26190461_26190992_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_177700.known	chr7	-	3730	11	FSM	ENSG00000122566.22	ENST00000678962.1	3730	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2891.45912819116	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGCACTGTATATTCA	-26201251	False	NA	-19	True	AATAAA	-9	NA	26201301	26189940	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_26190461_26191055_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_177704.known	chr7	-	4106	11	FSM	ENSG00000122566.22	ENST00000356674.8	4106	11	0	0	0	0	multi-exon	FALSE	canonical	3	1575	junction_10	3105.30703151878	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTATGCACTGTATATTC	-26200997	False	NA	-20	True	AATAAA	-8	NA	26201047	26189941	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
transcript_177714.known	chr7	-	3628	11	FSM	ENSG00000122566.22	ENST00000618183.5	3628	11	0	0	0	0	multi-exon	FALSE	canonical	3	6061	junction_10	1239.49685356599	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGCGTTTGAGTACTC	-26115624	True	NA	-5	True	AATAAA	-23	NA	26200746	26189926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_177717.known	chr7	-	4333	10	FSM	ENSG00000122566.22	ENST00000677839.1	4333	10	0	0	0	0	multi-exon	FALSE	canonical	3	6061	junction_9	1238.36619765971	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTATATTCAGCGTTTGA	-26201251	False	NA	-11	True	AATAAA	-17	NA	26201301	26189932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_177747.known	chr7	+	2128	6	FSM	ENSG00000122565.19	ENST00000337620.8	2128	6	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_1	1504.55370126825	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTAGACTTTTTTCTTTA	26201065	True	NA	32	True	AATAAA	-24	NA	26201161	26213356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_26201562_26202970_26203023_26206367_26206511_26208392_26208556_26211661_26211757_26212081
transcript_177751.known	chr7	+	2061	6	FSM	ENSG00000122565.19	ENST00000396386.7	2061	6	0	0	0	0	multi-exon	FALSE	canonical	3	3707	junction_1	195.776811701488	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTGTAACTGTCTTCT	26168194	True	NA	9	True	ATTAAA	-19	NA	26201744	26213607	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_26201827_26202970_26203023_26206367_26206511_26208392_26208556_26211661_26211757_26212081
transcript_177766.known	chr7	+	3740	4	FSM	ENSG00000050344.9	ENST00000056233.4	3740	4	0	0	0	0	multi-exon	FALSE	canonical	3	745	junction_1	56.1209012361309	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCTAGTATGCTTCTAG	26144312	True	NA	22	True	AATAAA	-31	NA	26152197	26187137	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_26153069_26177942_26178123_26183700_26183785_26184532
transcript_177773.nic	chr7	-	751	4	ISM	ENSG00000122566.22	ENST00000495810.2	1580	7	349	1194	95	-1194	5prime_fragment	FALSE	canonical	3	6061	junction_3	1926.60916869221	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGATACCATTGAGATAATT	-26200710	True	NA	4	True	NA	NA	NA	26200952	26196905	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_26197018_26197314_26197462_26197621_26197733_26200571
transcript_17779.known	chr1	-	9636	51	FSM	ENSG00000047410.14	ENST00000367478.9	9636	51	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_37	98.2437702859576	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGAGTGTAATTCTTTAA	-186365834	True	NA	NA	False	AATAAA	-7	NA	186375253	186311651	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_186314027_186314628_186314725_186317481_186317601_186318446_186318604_186318732_186318829_186320311_186320419_186322317_186322413_186322517_186322587_186323685_186323871_186325763_186325855_186326103_186326236_186327459_186327661_186331497_186331582_186332194_186332344_186333121_186333395_186334324_186334534_186335067_186335130_186335337_186335544_186336495_186336695_186337012_186337157_186338032_186338244_186339641_186339773_186341027_186341160_186341251_186341390_186343325_186343474_186343905_186344091_186344374_186344579_186345579_186345697_186346134_186346288_186347291_186347459_186350222_186350389_186351329_186351471_186351975_186352111_186353687_186353851_186355409_186355559_186355634_186355769_186356285_186356450_186357396_186357624_186358542_186358651_186359798_186359997_186360272_186360365_186360764_186360906_186361621_186361710_186361788_186361870_186362287_186362381_186362836_186363002_186363341_186363446_186367885_186367983_186370969_186371044_186373358_186373464_186374877
transcript_177794.known	chr7	+	2258	1	FSM	ENSG00000050344.9	ENST00000606261.1	2258	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGAACCAAATTTACCTTA	NA	False	NA	35	True	AATAAA	-45	NA	26184059	26186317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_26184100_26186300
transcript_177796.nic	chr7	+	2759	8	NIC	ENSG00000086300.16	novel	2665	7	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	60.7416744946018	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTGCCGGATCACTTAT	NA	False	NA	4	True	ATTAAA	-15	NA	26291832	26374327	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_26292087_26346419_26346467_26357006_26357128_26360974_26361062_26364534_26364636_26365046_26365146_26371820_26372034_26372490
transcript_177797.known	chr7	+	823	7	FSM	ENSG00000086300.16	ENST00000416246.5	823	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	65.0215776150929	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCAGAAAGGTATTTCCT	26291228	True	NA	55	True	AAAAAG	-18	NA	26291920	26372022	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_26292087_26346419_26346467_26357006_26357128_26360974_26361062_26364534_26364636_26365046_26365146_26371820
transcript_177798.known	chr7	+	2665	7	FSM	ENSG00000086300.16	ENST00000338523.9	2665	7	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_6	15.8263142336497	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGTTTTTTATTTTTT	26291169	True	NA	60	True	AATATA	-19	NA	26291861	26374383	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_26292087_26346419_26346467_26360974_26361062_26364534_26364636_26365046_26365146_26371820_26372034_26372490
transcript_177801.nic	chr7	+	790	6	ISM	ENSG00000086300.16	ENST00000338523.9	2665	7	-29	2361	-29	0	5prime_fragment	FALSE	canonical	3	142	junction_2	15.7403938959608	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCAGAAAGGTATTTCCT	NA	False	NA	55	True	AAAAAG	-18	NA	26291832	26372022	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_26292087_26346419_26346467_26360974_26361062_26364534_26364636_26365046_26365146_26371820
transcript_177802.known	chr7	+	2613	7	FSM	ENSG00000086300.16	ENST00000446848.6	2613	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	56.9522216911295	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATCAACTTTGCCG	26291202	True	NA	-6	True	ATTAAA	-5	NA	26291894	26374317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_26292134_26346419_26346467_26360974_26361062_26364534_26364636_26365046_26365146_26371820_26372034_26372490
transcript_177803.known	chr7	+	2063	2	FSM	ENSG00000214870.10	ENST00000653790.1	2063	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACGCCTGTAAATCCCTGC	26398856	True	NA	NA	False	NA	NA	NA	26398929	26401216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_26399022_26399245
transcript_177805.known	chr7	-	3839	13	FSM	ENSG00000005020.13	ENST00000345317.7	3839	13	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_1	3.73794358200097	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTTATGATGCTAATAATT	-26864229	True	NA	-5	True	AATAAA	-18	NA	26864590	26667067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_26669657_26670090_26670193_26684735_26684849_26690284_26690363_26725427_26725566_26725922_26725987_26726881_26727007_26738794_26738879_26739886_26739965_26844029_26844138_26854136_26854163_26854784_26854891_26864362
transcript_177813.known	chr7	-	1878	8	FSM	ENSG00000106049.9	ENST00000265395.7	1878	8	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_5	22.8026135272576	215	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTCTTGGTGTTTTTGT	-27658118	True	NA	-6	True	AATAAA	-16	NA	27662883	27525441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_27526373_27531191_27531349_27538340_27538418_27542966_27543101_27629370_27629493_27632335_27632446_27649472_27649634_27662697
transcript_177823.known	chr7	+	2478	17	FSM	ENSG00000106052.14	ENST00000265393.10	2478	17	0	0	0	0	multi-exon	TRUE	canonical	3	936	junction_13	118.328577882733	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACACCTAAAATAGACCAC	27730081	True	NA	63	True	AGTAAA	-15	NA	27740094	27828881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_27740270_27748517_27748687_27758030_27758134_27765833_27766022_27769675_27769835_27785162_27785312_27785398_27785490_27787417_27787604_27792005_27792231_27793065_27793213_27794322_27794447_27796115_27796220_27799964_27800091_27816348_27816395_27816889_27817039_27827737_27827821_27828627
transcript_177827.known	chr7	+	3423	17	FSM	ENSG00000106052.14	ENST00000396319.7	3423	17	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_14	253.833329913548	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATTGTTGTCAAATTTA	27730148	True	NA	19	True	ATTAAA	-31	NA	27740161	27829767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_27740270_27748517_27748687_27758030_27758134_27765833_27766022_27769675_27769835_27785162_27785312_27785398_27785490_27787417_27787604_27792005_27792231_27793065_27793213_27794322_27794447_27796115_27796220_27799964_27800091_27816348_27816521_27816889_27817039_27827737_27827821_27828627
transcript_177847.known	chr7	-	3173	5	FSM	ENSG00000153814.13	ENST00000283928.10	3173	5	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_3	6.86931583201704	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATATGGCTCTTTATTTT	NA	False	NA	-21	True	AATAAA	-19	NA	28180795	27830576	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_27832977_27840697_27840868_27895219_27895417_27991908_27991982_28180462
transcript_177850.known	chr7	-	4973	1	FSM	ENSG00000255690.3	ENST00000539664.3	4973	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTGGAGTTTCCAAATA	-28958266	False	NA	NA	False	AATAAA	-18	NA	28958330	28953357	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_28953400_28958300
transcript_177853.known	chr7	-	1739	13	FSM	ENSG00000106066.15	ENST00000396276.7	1739	13	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_12	137.376813505369	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGCTTTTGTTTTTGGGG	-29142948	True	NA	38	True	AATAAA	-18	NA	29146497	28995630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_28995883_29030576_29030760_29064060_29064235_29066022_29066122_29071772_29071905_29072300_29072424_29086483_29086551_29092622_29092703_29095083_29095143_29096102_29096218_29112703_29112823_29120892_29121072_29146340
transcript_177854.known	chr7	-	2087	13	FSM	ENSG00000106066.15	ENST00000265394.10	2087	13	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_12	62.0785233035996	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGATGAGTCAATTCTT	-29142988	True	NA	NA	False	AATAAA	-17	NA	29146537	28995234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_28995883_29030576_29030760_29064060_29064235_29066022_29066122_29071772_29071905_29072300_29072424_29086483_29086551_29092622_29092703_29095083_29095143_29096102_29096218_29112703_29112823_29120892_29121072_29146428
transcript_177857.nic	chr7	-	1339	12	ISM	ENSG00000106066.15	ENST00000265394.10	2087	13	31	35411	-9	-35009	5prime_fragment	FALSE	canonical	3	368	junction_11	63.3695706103398	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGGAAGATCTTTAAATC	-29142957	True	NA	NA	False	AATACA	-18	NA	29146506	29030645	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_29030760_29064060_29064235_29066022_29066122_29071772_29071905_29072300_29072424_29086483_29086551_29092622_29092703_29095083_29095143_29096102_29096218_29112703_29112823_29120892_29121072_29146428
transcript_177868.known	chr7	+	570	2	FSM	ENSG00000106069.24	ENST00000470261.1	570	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAATCTTCTGCACTGTCC	29146140	True	NA	NA	False	NA	NA	NA	29146631	29147304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_29146746_29146848
transcript_177869.nnic	chr7	-	1268	5	NNC	ENSG00000223813.4	novel	1434	3	NA	NA	-8	4039	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	4.54835134966506	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTTTCGGGAGCAATTT	-29563395	True	NA	-2	True	AATAAA	-20	NA	29563699	29510184	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_29510644_29512811_29512984_29515056_29515318_29561858_29561923_29563387
transcript_177874.known	chr7	+	503	2	FSM	ENSG00000176532.4	ENST00000450427.1	503	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAGCAGAAAGAAAAGCAA	29565391	False	NA	NA	False	NA	NA	NA	29565449	29566383	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_29565754_29566184
transcript_177875.known	chr7	+	1652	2	FSM	ENSG00000176532.4	ENST00000319694.3	1652	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTAAGGTGACTTTTGTA	29563341	True	NA	6	True	ATTAAA	-16	NA	29563834	29567293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_29564378_29566184
transcript_177880.known	chr7	+	4184	9	FSM	ENSG00000122574.12	ENST00000242140.10	4225	9	46	-5	46	5	multi-exon	FALSE	canonical	1	1	junction_4	7.06664701255129	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTCGTTTCCTTGTTAAA	29806080	True	NA	28	True	AATAAA	-22	NA	29806553	29917066	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_29806679_29834667_29834815_29875829_29875963_29879008_29879141_29883849_29884594_29888067_29888218_29889305_29889408_29904285_29904363_29914492
transcript_177885.known	chr7	+	7514	14	FSM	ENSG00000106086.20	ENST00000440706.3	7514	14	0	0	0	0	multi-exon	TRUE	canonical	2	119	junction_13	42.5848265890716	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTGTGTGGTTTTCTG	30028494	False	NA	17	True	AATAAA	-29	NA	30028684	30084663	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_30028803_30045084_30045202_30046209_30046366_30047831_30047957_30049223_30049383_30050433_30050475_30052708_30052867_30054708_30054866_30055256_30055343_30060883_30060943_30061896_30062028_30062671_30062743_30074070_30074133_30078589
transcript_177888.known	chr7	+	2140	14	FSM	ENSG00000106086.20	ENST00000622102.4	2140	14	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_13	62.275015172964	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGAGTTTGTGGCCTGT	30025644	True	NA	19	True	AATAAA	-16	NA	30028360	30118345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_30028803_30045084_30045202_30046209_30046366_30047831_30047957_30049223_30049383_30050433_30050475_30052708_30052867_30054708_30054866_30055256_30055343_30060883_30060943_30061896_30062028_30062671_30062743_30074070_30074133_30117969
transcript_177889.known	chr7	+	1907	14	FSM	ENSG00000106086.20	ENST00000396257.6	1907	14	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_13	65.3042039477891	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAGTCAAGATTTTTATT	30025708	True	NA	NA	False	NA	NA	NA	30028424	30129472	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_30028803_30045084_30045202_30046209_30046366_30047831_30047957_30049223_30049383_30050433_30050475_30052708_30052867_30054708_30054866_30055256_30055343_30060883_30060943_30061896_30062028_30062671_30062743_30074070_30074133_30129265
transcript_17789.nic	chr1	-	2974	21	ISM	ENSG00000047410.14	ENST00000367478.9	9636	51	-76	38674	-4	1097	5prime_fragment	FALSE	canonical	3	232	junction_7	25.0499500997507	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACTATTAAAAAATGCTCA	-186374350	False	NA	NA	False	NA	NA	NA	186375329	186350325	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_186350389_186351329_186351471_186351975_186352111_186353687_186353851_186355409_186355559_186355634_186355769_186356285_186356450_186357396_186357624_186358542_186358651_186359798_186359997_186360272_186360365_186360764_186360906_186361621_186361710_186361788_186361870_186362287_186362381_186362836_186363002_186363341_186363446_186367885_186367983_186370969_186371044_186373358_186373464_186374877
transcript_177894.known	chr7	+	2293	13	FSM	ENSG00000106086.20	ENST00000258679.11	2293	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_12	70.3891958249907	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTATTGTTTCAGTTCAC	30025645	True	NA	NA	False	AATAAA	-19	NA	30028361	30090744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_30028803_30045084_30045202_30046209_30046366_30047831_30047957_30049223_30049383_30050433_30050475_30052708_30052867_30054708_30054866_30055256_30055343_30060883_30060943_30061896_30062028_30062671_30062743_30090152
transcript_177895.nnic	chr7	+	2092	13	NIC	ENSG00000106086.20	novel	2140	14	NA	NA	-29	-15	combination_of_known_splicesites	FALSE	canonical	2	18	junction_12	66.7251306147508	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAATTGCTTGCCTATTT	30028309	True	NA	4	True	AATAAA	-1	NA	30028331	30118330	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_30028803_30045084_30045202_30046209_30046366_30047831_30047957_30049223_30049383_30050433_30050475_30052708_30052867_30054708_30054866_30055256_30055343_30060883_30060943_30061896_30062028_30062671_30062743_30117969
transcript_177898.known	chr7	+	2840	13	FSM	ENSG00000106086.20	ENST00000396259.5	2840	13	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_12	66.7251306147508	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAAGTATTTCTGTTTCT	30025724	True	NA	NA	False	AATAAA	-17	NA	30028440	30130483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_30028803_30045084_30045202_30046209_30046366_30047831_30047957_30049223_30049383_30050433_30050475_30052708_30052867_30054708_30054866_30055256_30055343_30060883_30060943_30061896_30062028_30062671_30062743_30129265
transcript_177901.nic	chr7	+	1087	7	ISM	ENSG00000106086.20	ENST00000449726.6	7774	14	-20	31864	0	2000	5prime_fragment	FALSE	canonical	2	143	junction_3	34.3240278651689	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAATTCCTTATATTTGA	30025675	True	NA	NA	False	AATAAA	-28	NA	30028391	30052786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_30028803_30045084_30045202_30046209_30046366_30047831_30047957_30049223_30049383_30050433_30050475_30052708
transcript_177902.nic	chr7	+	780	4	ISM	ENSG00000106086.20	ENST00000449726.6	7774	14	-80	36783	-29	-1344	5prime_fragment	FALSE	canonical	2	143	junction_3	44.5820093261346	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCAGAACTAAGACTCTAC	30028309	True	NA	NA	False	AAAACA	-22	NA	30028331	30047867	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_30028803_30045084_30045202_30046209_30046366_30047831
transcript_177904.known	chr7	-	5254	8	FSM	ENSG00000136193.17	ENST00000242059.10	5254	8	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_6	39.3840328155501	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCAGTGGAGTGGCCTCT	-29980756	True	NA	-10	True	AATAAA	-16	NA	29989801	29920108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_29924116_29926451_29926633_29936555_29936722_29940681_29940877_29943976_29944180_29955178_29955361_29968908_29969069_29989641
transcript_177907.nic	chr7	-	920	5	ISM	ENSG00000136193.17	ENST00000242059.10	5254	8	-22	20575	-22	0	5prime_fragment	FALSE	canonical	3	399	junction_3	45.2272042027804	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGAGTTAGTCTCTCCCT	-29980778	True	NA	NA	False	AAAACA	-4	NA	29989823	29940683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_29940877_29943976_29944180_29955178_29955361_29968908_29969069_29989641
transcript_177908.known	chr7	-	703	5	FSM	ENSG00000106080.11	ENST00000412494.1	703	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	63.103090257134	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTATTTTTATACAATGT	-30023958	False	NA	NA	False	AATATA	-41	NA	30026419	30014670	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_30014894_30018995_30019124_30020212_30020305_30022664_30022817_30026311
transcript_177913.known	chr7	-	4978	4	FSM	ENSG00000106080.11	ENST00000222803.10	4978	4	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_2	8.16496580927726	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATTTTGTGAAAAATTCT	-30024241	True	NA	-4	True	AATAAA	-18	NA	30026702	30010586	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_30014894_30018995_30019124_30022664_30022817_30026311
transcript_177923.known	chr7	-	751	2	FSM	ENSG00000106080.11	ENST00000479939.1	751	2	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATACATAAAATTTTTCA	-30024175	True	NA	NA	False	NA	NA	NA	30026636	30022390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_30022817_30026311
transcript_177926.known	chr7	+	5761	3	FSM	ENSG00000180354.16	ENST00000324453.13	5761	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	3	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTGTTTGCCTCTTTT	30134767	True	NA	24	True	ATTAAA	-16	NA	30134985	30162762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_30135299_30146176_30146300_30157437
transcript_177930.known	chr7	-	4503	14	FSM	ENSG00000106100.11	ENST00000222823.9	4503	14	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	3.9732835600446	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTTGAGTCTGGAGTTTT	-30478322	True	NA	0	True	AATAAA	-19	NA	30478784	30424526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_30425711_30429373_30429458_30433095_30433180_30435997_30436082_30437572_30437657_30446140_30446225_30446966_30447051_30448297_30448382_30451215_30453041_30455136_30455312_30456720_30457043_30459151_30459241_30459900_30460042_30478605
transcript_17794.nic	chr1	-	2765	18	NIC	ENSG00000047410.14	novel	2478	18	NA	NA	-414	-1652	combination_of_known_junctions	FALSE	canonical	3	42	junction_17	61.0646036026501	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCAGAAAATGAAAAAATACA	NA	False	NA	NA	False	AAAAAG	-6	NA	186376107	186355522	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_186355559_186355634_186355769_186356285_186356450_186357396_186357624_186358542_186358651_186359798_186359997_186360272_186360365_186360764_186360906_186361621_186361710_186361788_186361870_186362287_186362381_186362836_186363002_186363341_186363446_186367885_186367983_186370969_186371044_186373358_186373464_186374877_186375187_186375558
transcript_177940.known	chr7	-	757	5	FSM	ENSG00000106100.11	ENST00000419799.5	757	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	5.44862367942584	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCCCACCCAGCCTGACA	-30478280	True	NA	NA	False	NA	NA	NA	30478742	30456742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_30457043_30459151_30459241_30459900_30460042_30463608_30463699_30478605
transcript_177944.known	chr7	+	2559	18	FSM	ENSG00000106105.15	ENST00000674616.1	2559	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	482.164181143575	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGATCTATTTGCTTGT	30568297	True	NA	19	True	ATTAAA	-22	NA	30594877	30634033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_30595144_30598795_30598898_30599423_30599546_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30609584_30609731_30612095_30612246_30615895_30616059_30617113_30617279_30621392_30621501_30622316_30622463_30626233_30626320_30628559_30628670_30631447_30631542_30632246_30632438_30633734
transcript_177945.known	chr7	+	2385	18	FSM	ENSG00000106105.15	ENST00000676210.1	2385	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	476.949751801953	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTGACCACTTGCGCTA	30568262	True	NA	NA	False	AAAAAG	-32	NA	30594842	30633874	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_30595144_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30606325_30606398_30609584_30609731_30612095_30612246_30615895_30616059_30617113_30617279_30621392_30621501_30622316_30622463_30626233_30626320_30628559_30628670_30631447_30631542_30632246_30632438_30633734
transcript_177946.known	chr7	+	2513	18	FSM	ENSG00000106105.15	ENST00000674737.1	2513	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	477.7026481706	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGATCTATTTGCTTGT	30568297	True	NA	19	True	ATTAAA	-22	NA	30594877	30634033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_30595144_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30608407_30608484_30609584_30609731_30612095_30612246_30615895_30616059_30617113_30617279_30621392_30621501_30622316_30622463_30626233_30626320_30628559_30628670_30631447_30631542_30632246_30632438_30633734
transcript_17795.nic	chr1	-	2483	17	ISM	ENSG00000047410.14	ENST00000613151.1	2478	18	-128	1652	-128	-1652	5prime_fragment	FALSE	canonical	3	232	junction_3	26.9350346899721	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCAGAAAATGAAAAAATACA	-186374474	False	NA	NA	False	AAAAAG	-6	NA	186375453	186355522	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_186355559_186355634_186355769_186356285_186356450_186357396_186357624_186358542_186358651_186359798_186359997_186360272_186360365_186360764_186360906_186361621_186361710_186361788_186361870_186362287_186362381_186362836_186363002_186363341_186363446_186367885_186367983_186370969_186371044_186373358_186373464_186374877
transcript_177952.known	chr7	+	2536	18	FSM	ENSG00000106105.15	ENST00000675529.1	2536	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	469.439244367415	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGGCTGCCTGATTT	30568251	True	NA	-38	True	AAGAAA	-37	NA	30594831	30633976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_30595144_30595823_30595934_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30609584_30609731_30612095_30612246_30615895_30616059_30617113_30617279_30621392_30621501_30622316_30622463_30626233_30626320_30628559_30628670_30631447_30631542_30632246_30632438_30633734
transcript_17796.nic	chr1	-	2365	17	NIC	ENSG00000047410.14	novel	2478	18	NA	NA	-50	-1764	combination_of_known_junctions	FALSE	canonical	3	42	junction_16	62.0841163261587	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGATCACACCTTTGTC	-186374764	True	NA	NA	False	NA	NA	NA	186375743	186355634	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_186355769_186356285_186356450_186357396_186357624_186358542_186358651_186359798_186359997_186360272_186360365_186360764_186360906_186361621_186361710_186361788_186361870_186362287_186362381_186362836_186363002_186363341_186363446_186367885_186367983_186370969_186371044_186373358_186373464_186374877_186375187_186375558
transcript_177962.known	chr7	+	2437	17	FSM	ENSG00000106105.15	ENST00000389266.8	2437	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	313.92345802759	1405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGATCTATTTGCTTGT	30568297	True	NA	19	True	ATTAAA	-22	NA	30594877	30634033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_30595144_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30609584_30609731_30612095_30612246_30615895_30616059_30617113_30617279_30621392_30621501_30622316_30622463_30626233_30626320_30628559_30628670_30631447_30631542_30632246_30632438_30633734
transcript_177971.known	chr7	+	2378	16	FSM	ENSG00000106105.15	ENST00000676403.1	2378	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	426.834425353282	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGATCTATTTGCTTGT	30568262	True	NA	19	True	ATTAAA	-22	NA	30594842	30634033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_30595144_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30609584_30609731_30612095_30612246_30615895_30616059_30617113_30617279_30621392_30621501_30622316_30622463_30626233_30626320_30628559_30628670_30632246_30632438_30633734
transcript_177974.known	chr7	+	2246	16	FSM	ENSG00000106105.15	ENST00000674807.1	2246	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	433.383566319208	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACTTGCGCTAATAAAAAA	30568251	True	NA	NA	False	AAAAAG	-40	NA	30594831	30633882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_30595144_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30609584_30609731_30612095_30612246_30615895_30616059_30617113_30617279_30621392_30621501_30622316_30622463_30628559_30628670_30631447_30631542_30632246_30632438_30633734
transcript_177975.known	chr7	+	3217	16	FSM	ENSG00000106105.15	ENST00000675587.1	3217	16	0	0	0	0	multi-exon	FALSE	canonical	3	1144	junction_2	97.7465202563356	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACAAACTTGTGATCTAT	30568325	True	NA	11	True	ATTAAA	-14	NA	30594905	30634025	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_30595144_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30609584_30609731_30612095_30612246_30615895_30616059_30617113_30617279_30621392_30622463_30626233_30626320_30628559_30628670_30631447_30631542_30632246_30632438_30633734
transcript_177983.known	chr7	+	2148	12	FSM	ENSG00000106105.15	ENST00000478124.6	2148	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	355.092910667915	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTAAAAATACAAAAAAATTG	30568278	True	NA	NA	False	NA	NA	NA	30594858	30622934	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_30595144_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30609584_30609731_30612095_30612246_30615895_30616059_30617113_30617279_30621392_30621501_30622316
transcript_177985.known	chr7	+	1252	7	FSM	ENSG00000106105.15	ENST00000454308.6	1252	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	464.759585401121	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGCTTCACTGTTAGATT	30568283	True	NA	NA	False	AATAAA	-29	NA	30594863	30605448	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_30595144_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30604989
transcript_177988.known	chr7	-	784	4	FSM	ENSG00000006625.18	ENST00000447901.1	784	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	165.305777273512	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGTATCTTACTTGGGTG	-30496385	True	NA	NA	False	NA	NA	NA	30504801	30496976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_30497236_30497740_30497897_30498802_30498939_30504568
transcript_177989.known	chr7	-	1158	4	FSM	ENSG00000006625.18	ENST00000275428.9	1158	4	0	0	0	0	multi-exon	FALSE	canonical	3	608	junction_3	167.476034769821	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTGTCTCTACTAAAGT	-30496413	True	NA	-5	True	AATAAA	-17	NA	30504829	30496620	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_30497236_30498802_30498939_30500535_30500682_30504568
transcript_177990.known	chr7	-	890	4	FSM	ENSG00000196295.13	ENST00000580440.7	891	4	0	1	0	-1	multi-exon	FALSE	canonical	3	14	junction_1	6.68331255192114	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAGTTCATGTGACTTAA	-30594090	True	NA	-3	True	AATAAA	-39	NA	30594774	30577499	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_30578092_30579230_30579315_30585329_30585480_30594710
transcript_177991.known	chr7	-	1012	3	FSM	ENSG00000006625.18	ENST00000440082.5	1012	3	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_2	288.5	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTGTCTCTACTAAAGT	-30496413	True	NA	-5	True	AATAAA	-17	NA	30504829	30496620	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_30497236_30498802_30498939_30504568
transcript_177992.known	chr7	-	1032	3	FSM	ENSG00000006625.18	ENST00000005374.10	1032	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	301	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGTTGTCTCTACTAAA	-30496425	True	NA	-7	True	AATAAA	-15	NA	30504841	30496622	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_30497236_30500535_30500682_30504568
transcript_177994.known	chr7	-	836	2	FSM	ENSG00000006625.18	ENST00000409144.5	836	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGGTTTAACCTGTTGT	-30496385	True	NA	15	True	AATAAA	-5	NA	30504801	30496632	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_30497236_30504568
transcript_177996.known	chr7	-	954	4	FSM	ENSG00000006625.18	ENST00000409436.2	954	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	277.64045494528	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGAGAAAGTTGATATTC	-30496400	True	NA	NA	False	ATTAAA	-16	NA	30504816	30497472	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_30497897_30498802_30498939_30500535_30500682_30504568
transcript_177997.known	chr7	-	2803	3	FSM	ENSG00000196295.13	ENST00000581794.6	2803	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	-30594093	True	NA	NA	False	NA	NA	NA	30594777	30566403	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_30568990_30585329_30585480_30594710
transcript_177998.known	chr7	+	2276	17	FSM	ENSG00000106105.15	ENST00000676140.1	2276	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	421.168909108923	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTGACCACTTGCGCTA	30568297	True	NA	NA	False	AAAAAG	-32	NA	30594877	30633874	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_30595144_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30609584_30609731_30612095_30612246_30615897_30616059_30617113_30617279_30621392_30621501_30622316_30622463_30626233_30626320_30628559_30628670_30631447_30631542_30632246_30632438_30633734
transcript_17800.nic	chr1	-	2728	16	ISM	ENSG00000047410.14	ENST00000613151.1	2478	18	-409	1764	-41	-1764	5prime_fragment	FALSE	canonical	3	232	junction_2	26.9102211064867	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGATCACACCTTTGTC	-186374755	True	NA	NA	False	NA	NA	NA	186375734	186355634	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_186355769_186356285_186356450_186357396_186357624_186358542_186358651_186359798_186359997_186360272_186360365_186360764_186360906_186361621_186361710_186361788_186361870_186362287_186362381_186362836_186363002_186363341_186363446_186367885_186367983_186370969_186371044_186373358_186373464_186374877
transcript_178000.known	chr7	+	2733	18	FSM	ENSG00000106125.14	ENST00000265299.6	2733	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	8.72097261329258	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAAGGGCCCAGGCTCAT	30771009	True	NA	NA	False	TATAAA	-16	NA	30771416	30892387	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_30771557_30778431_30778552_30781976_30782213_30785748_30785993_30791164_30791575_30828678_30828738_30836657_30836765_30839199_30839317_30840759_30840849_30850453_30850556_30852215_30852280_30853393_30853460_30859256_30859325_30872242_30872307_30875494_30875657_30882180_30882362_30882920_30882994_30891956
transcript_178010.known	chr7	+	6639	16	FSM	ENSG00000078549.15	ENST00000304166.9	6639	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	14.4169653148258	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTGGCTGTAACTTGGC	31051680	True	NA	10	True	AATAAA	-16	NA	31052307	31111474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_31052679_31063193_31063316_31064830_31064937_31077990_31078099_31080612_31080634_31081712_31081755_31084140_31084251_31084736_31084835_31085309_31085443_31086383_31086538_31086942_31087004_31087626_31087697_31092643_31092736_31103236_31103367_31104867_31104910_31106495
transcript_178011.known	chr7	+	1889	14	FSM	ENSG00000078549.15	ENST00000409363.5	1889	14	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	8.0589543715131	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTGGTCAGCCTCAGTG	31051899	False	NA	NA	False	NA	NA	NA	31052526	31107006	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_31052679_31063193_31063316_31064830_31064937_31077990_31078099_31084140_31084251_31084736_31084835_31085309_31085443_31086383_31086538_31086942_31087004_31087626_31087697_31092643_31092736_31103236_31103367_31104867_31104910_31106495
transcript_178015.known	chr7	+	538	2	FSM	ENSG00000180347.14	ENST00000471139.1	538	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGCAAACAGTACAAGTA	NA	False	NA	NA	False	AATAAA	-12	NA	31554471	31555343	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_31554524_31554857
transcript_178016.known	chr7	+	1768	5	FSM	ENSG00000106341.11	ENST00000342032.8	1768	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	8.12403840463596	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCTGTCCTCGTGCGTT	31686336	True	NA	15	True	AATAAA	-15	NA	31687214	31708455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_31687307_31692405_31692524_31695468_31695622_31696964_31697118_31707203
transcript_178017.known	chr7	+	569	4	FSM	ENSG00000106341.11	ENST00000409146.3	569	4	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_2	15.5205956357638	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAGGAGATGTATGCCAT	31686336	True	NA	NA	False	NA	NA	NA	31687214	31707409	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_31687307_31692405_31692524_31696964_31697118_31707203
transcript_178019.known	chr7	-	687	5	FSM	ENSG00000106355.10	ENST00000410044.5	687	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1071.72862703205	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATTTTGTTTATTCTA	-32485211	True	NA	-6	True	AATAAA	-16	NA	32490361	32487034	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_32487294_32487684_32487758_32488624_32488653_32489248_32489345_32490130
transcript_178020.known	chr7	-	2214	5	FSM	ENSG00000106355.10	ENST00000450169.7	2214	5	0	0	0	0	multi-exon	FALSE	canonical	3	2334	junction_4	68.1945745642569	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTATGTTTTCTGCGTTTG	-32485230	True	NA	-5	True	NA	NA	NA	32490380	32485337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_32487294_32487684_32487758_32488624_32488653_32489248_32489345_32490319
transcript_178022.known	chr7	-	1295	5	FSM	ENSG00000106355.10	ENST00000223084.7	1295	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	1060.04230458034	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATTTTGTTTATTCTA	-32490758	False	NA	-6	True	AATAAA	-16	NA	32490863	32487034	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_32487294_32487684_32487758_32488624_32488653_32489248_32489345_32490024
transcript_178028.known	chr7	-	740	5	FSM	ENSG00000106355.10	ENST00000409909.7	740	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	1055.71406521842	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGATTTTTCTTCTGATT	-32494824	True	NA	-5	True	ATTAAA	-18	NA	32495283	32486804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_32487294_32487684_32487758_32488624_32488653_32489248_32489345_32495229
transcript_178029.known	chr7	-	504	4	FSM	ENSG00000106355.10	ENST00000409987.5	504	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	1143.69586089232	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATTTTGTTTATTCTA	-32485230	True	NA	-6	True	AATAAA	-16	NA	32490380	32487034	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_32487294_32487684_32487758_32489233_32489345_32490319
transcript_178036.known	chr7	-	687	5	FSM	ENSG00000106355.10	ENST00000409952.3	687	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	1070.43014134506	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGAAAATAAAGGTGTTT	-32494790	True	NA	-34	True	AAAAAG	-23	NA	32495249	32487062	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_32487294_32487684_32487758_32488624_32488653_32489248_32489345_32494990
transcript_178040.known	chr7	+	6987	16	FSM	ENSG00000105778.20	ENST00000318709.9	6987	16	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_11	16.4673414166748	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTCCTAGAAGTACCCTG	32488239	True	NA	27	True	AATAAA	-36	NA	32495488	32588726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_32495803_32543140_32543262_32544693_32544780_32548846_32548919_32551333_32551424_32552228_32552296_32553726_32553768_32554557_32554597_32558558_32558629_32558928_32559465_32570019_32570155_32573198_32573419_32575954_32576073_32580218_32580273_32580801_32580891_32583791
transcript_178041.nnic	chr7	+	2110	16	NNC	ENSG00000105778.20	novel	6987	16	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_9	33.4741027595297	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGAATTTTGAGTTCTGA	32488263	True	NA	5	True	ATTAAA	-18	NA	32495512	32584167	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_32495803_32543140_32543262_32544693_32544780_32548846_32548919_32551333_32551424_32552228_32552296_32553726_32553768_32554557_32554597_32558558_32558629_32559222_32559465_32570019_32570155_32573198_32573419_32575954_32576073_32580218_32580273_32580801_32580891_32583791
transcript_178047.known	chr7	+	4336	15	FSM	ENSG00000105778.20	ENST00000409301.5	4336	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	36.2644060044714	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCTTTAATATCACTTG	32488276	True	NA	11	True	AATAAA	-21	NA	32495525	32586166	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_32495803_32543140_32543262_32544693_32544780_32548846_32548919_32551333_32551424_32552228_32552296_32553726_32553768_32554557_32554597_32558558_32558629_32558928_32559465_32570019_32570155_32573198_32573419_32575954_32576073_32580801_32580891_32583791
transcript_178054.nnic	chr7	+	2663	3	NNC	ENSG00000237004.4	novel	711	2	NA	NA	-543	1060	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	4	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCATAGTCTTTTAGGCT	32728001	False	NA	NA	False	AATAAA	-26	NA	32728025	32754804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_32729010_32751393_32751474_32753205
transcript_178055.known	chr7	+	711	2	FSM	ENSG00000237004.4	ENST00000650302.1	711	2	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATCGTCTGGGATGTGA	32728763	False	NA	NA	False	NA	NA	NA	32728837	32753744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_32729010_32753205
transcript_178060.known	chr7	-	3608	4	FSM	ENSG00000170852.12	ENST00000304056.9	3608	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	6.0184900284226	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTATTTTTCTTTTGTTA	-32891731	False	NA	-19	True	AATAAA	-15	NA	32891760	32868171	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_32870881_32874991_32875158_32879434_32879943_32891535
transcript_178068.known	chr7	+	3424	10	FSM	ENSG00000122642.11	ENST00000242209.9	3424	10	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_5	9.68899082515184	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTGGTTTTCTGATATT	32956156	True	NA	3	True	AATAAA	-44	NA	32957439	33006928	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_32957795_32974616_32974763_32975181_32975372_32976353_32976500_32980363_32980554_32988506_32988653_32996162_32996350_33000114_33000261_33002675_33002840_33005174
transcript_178072.known	chr7	-	1742	10	FSM	ENSG00000122643.23	ENST00000456458.5	1742	10	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_8	102.625653183588	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATGGTCAAAACTATCT	-33058989	True	NA	-19	True	AATAAA	-24	NA	33062796	33014129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_33014832_33015669_33015871_33017438_33017602_33019634_33019725_33021271_33021358_33022052_33022100_33024038_33024109_33026816_33026916_33035933_33035989_33062567
transcript_178074.known	chr7	-	1667	9	FSM	ENSG00000122643.23	ENST00000610140.7	1667	9	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_8	29.2123154679666	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATGGTCAAAACTATCT	-33058969	True	NA	-19	True	AATAAA	-24	NA	33062776	33014129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_33014832_33015669_33015871_33017438_33017602_33019634_33019725_33021271_33021358_33022052_33022100_33024038_33024109_33026816_33026916_33062567
transcript_178082.known	chr7	-	1135	6	FSM	ENSG00000164610.10	ENST00000297157.8	1135	6	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_5	28.5965032827442	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATGTATTTATTTATGA	-33106874	True	NA	0	True	AATAAA	-23	NA	33109404	33094796	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_33095433_33096492_33096555_33097270_33097363_33099306_33099437_33100530_33100562_33109220
transcript_178084.known	chr7	-	2088	5	FSM	ENSG00000164610.10	ENST00000492391.2	2088	5	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_4	29.2232783924049	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAGAATCTCTGAGGCGT	-33106872	True	NA	NA	False	NA	NA	NA	33109402	33094935	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_33095433_33096492_33096555_33097270_33097363_33099306_33100562_33109220
transcript_178085.known	chr7	+	3996	23	FSM	ENSG00000122507.21	ENST00000242067.11	3996	23	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_14	133.438575029056	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATGCCTCTCAGTACAA	33129186	True	NA	6	True	AATAAA	-20	NA	33129563	33606069	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_33130042_33146241_33146365_33152700_33152852_33155637_33155703_33177477_33177592_33257235_33257411_33264289_33264375_33273011_33273196_33273826_33273957_33336440_33336623_33340896_33340974_33344580_33344635_33349067_33349171_33351218_33351324_33352858_33352874_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33505462_33505646_33533953_33534177_33604864_33604976_33605194
transcript_178088.known	chr7	+	4004	22	FSM	ENSG00000122507.21	ENST00000355070.6	4004	22	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_14	134.187823151306	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAATGCCTCTCAGTACA	33129162	True	NA	5	True	AATAAA	-19	NA	33129539	33606068	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_33130042_33146241_33146365_33152700_33152852_33155637_33155703_33177477_33177592_33257235_33257411_33264289_33264375_33273011_33273196_33273826_33273957_33336440_33336623_33340896_33340974_33344580_33344635_33349067_33349171_33351218_33351324_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33505462_33505646_33533953_33534177_33604864_33604976_33605194
transcript_17809.nic	chr1	-	1115	6	ISM	ENSG00000047410.14	ENST00000613151.1	2478	18	-128	8972	-128	-8972	5prime_fragment	FALSE	canonical	3	258	junction_2	23.6186367091752	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGGTAAGTTAGTAAAA	-186374474	False	NA	14	True	AATAAA	-4	NA	186375453	186362842	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_186363002_186363341_186363446_186367885_186367983_186370969_186371044_186373358_186373464_186374877
transcript_178090.known	chr7	+	3914	22	FSM	ENSG00000122507.21	ENST00000396127.6	3914	22	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_13	135.954991218374	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAATGCCTCTCAGTACA	33129162	True	NA	5	True	AATAAA	-19	NA	33129539	33606068	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_33130042_33146241_33146365_33152700_33152852_33155637_33155703_33177477_33177592_33257235_33257411_33264289_33264375_33273011_33273196_33273826_33273957_33336440_33336623_33340896_33340974_33344580_33344635_33349067_33349171_33352858_33352874_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33505462_33505646_33533953_33534177_33604864_33604976_33605194
transcript_178091.known	chr7	+	3899	21	FSM	ENSG00000122507.21	ENST00000350941.7	3899	21	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_13	135.316028244994	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAATGCCTCTCAGTACA	33129162	True	NA	5	True	AATAAA	-19	NA	33129539	33606068	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_33130042_33146241_33146365_33152700_33152852_33155637_33155703_33177477_33177592_33257235_33257411_33264289_33264375_33273011_33273196_33273826_33273957_33336440_33336623_33340896_33340974_33344580_33344635_33349067_33349171_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33505462_33505646_33533953_33534177_33604864_33604976_33605194
transcript_178099.nnic	chr7	+	1730	10	NIC	ENSG00000122507.21	novel	549	5	NA	NA	-74	0	combination_of_known_splicesites	FALSE	canonical	3	258	junction_1	38.2034837788324	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTGGATTTTATTTATA	33348473	True	NA	NA	False	AATAAA	-20	NA	33351852	33605632	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_33352050_33352858_33352874_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33505462_33505646_33533953_33534177_33604864_33604976_33605194
transcript_178100.nnic	chr7	+	1799	10	NIC	ENSG00000122507.21	novel	549	5	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	258	junction_1	38.2034837788324	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATGAAACTTTCATGTGA	33348543	True	NA	-4	True	AATAAA	-7	NA	33351922	33605771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_33352050_33352858_33352874_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33505462_33505646_33533953_33534177_33604864_33604976_33605194
transcript_178104.nic	chr7	+	1694	9	NIC	ENSG00000122507.21	novel	549	5	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	3	96	junction_1	84.2614977317636	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTGGATTTTATTTATA	33348494	True	NA	NA	False	AATAAA	-20	NA	33351873	33605632	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_33352050_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33505462_33505646_33533953_33534177_33604864_33604976_33605194
transcript_178105.nic	chr7	+	1833	9	NIC	ENSG00000122507.21	novel	549	5	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	3	96	junction_1	84.2614977317636	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATGAAACTTTCATGTGA	33348494	True	NA	-4	True	AATAAA	-7	NA	33351873	33605771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_33352050_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33505462_33505646_33533953_33534177_33604864_33604976_33605194
transcript_178113.nnic	chr7	+	2292	7	NIC	ENSG00000122507.21	novel	549	5	NA	NA	6	1185	combination_of_known_splicesites	FALSE	canonical	3	27	junction_6	119.853614417292	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATTTGCCTGTTATTTTT	33348553	True	NA	2	True	CATAAA	-17	NA	33351932	33391833	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_33352050_33352858_33352874_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33390236
transcript_178115.nnic	chr7	+	2273	6	NIC	ENSG00000122507.21	novel	549	5	NA	NA	-1	-933	combination_of_known_splicesites	FALSE	canonical	3	258	junction_1	45.1353519981843	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATGGTTATTTGAAAATT	33348546	True	NA	NA	False	NA	NA	NA	33351925	33389715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_33352050_33352858_33352874_33357854_33357996_33367766_33367863_33383665_33383839_33387991
transcript_178117.nic	chr7	+	2267	6	NIC	ENSG00000122507.21	novel	549	5	NA	NA	16	1185	combination_of_known_junctions	FALSE	canonical	3	27	junction_5	149.555875845785	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATTTGCCTGTTATTTTT	33348563	True	NA	2	True	CATAAA	-17	NA	33351942	33391833	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_33352050_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33390236
transcript_178118.known	chr7	+	549	5	FSM	ENSG00000122507.21	ENST00000627264.1	549	5	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	116.362579895772	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTAGAAGAACTCTTA	33348547	True	NA	NA	False	GATAAA	-6	NA	33351926	33388007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_33352050_33357854_33357996_33367766_33367863_33383665_33383839_33387991
transcript_178119.known	chr7	-	2884	9	FSM	ENSG00000122557.11	ENST00000311350.8	2884	9	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_8	18.2067123611046	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTTATGGGATATTTGT	-35693943	True	NA	-5	True	AATAAA	-18	NA	35695135	35632658	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_35633852_35634311_35634430_35635134_35635459_35638349_35638473_35667433_35667589_35670214_35670329_35673200_35673279_35694183_35694628_35694800
transcript_178123.known	chr7	-	3057	8	FSM	ENSG00000122557.11	ENST00000396081.5	3057	8	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_5	8.46601850858803	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTTATGGGATATTTGT	-35693943	True	NA	-5	True	AATAAA	-18	NA	35695135	35632658	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_35633852_35634311_35634430_35635134_35635459_35638349_35638473_35667433_35667589_35670214_35670329_35673200_35673279_35694183
transcript_17813.nic	chr1	-	677	4	ISM	ENSG00000047410.14	ENST00000613151.1	2478	18	47	14015	-25	5507	5prime_fragment	FALSE	canonical	3	264	junction_2	22.6421435969889	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGAAGAAGTGCTTGTAG	-186365859	True	NA	NA	False	NA	NA	NA	186375278	186367885	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_186367983_186370969_186371044_186373358_186373464_186374877
transcript_178134.known	chr7	+	4200	1	FSM	ENSG00000271122.1	ENST00000605778.1	4200	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATTTGTAAATAATGGTT	35694752	True	NA	NA	False	AATAAA	-18	NA	35695213	35699413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_35695200_35699400
transcript_178140.known	chr7	+	1464	14	FSM	ENSG00000122545.21	ENST00000635175.1	1464	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	408.407514897623	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATCCATAATGATGGAT	35783521	True	NA	NA	False	NA	NA	NA	35801218	35904385	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_35801271_35831424_35831497_35832797_35832901_35863551_35863659_35872665_35872767_35873640_35873776_35879822_35879941_35882483_35882577_35883890_35883988_35885827_35885880_35890667_35890794_35898247_35898384_35903075_35903216_35904253
transcript_178143.known	chr7	+	4399	13	FSM	ENSG00000122545.21	ENST00000399034.7	4399	13	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_1	285.620219386202	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAGCTCCAATGAATTAT	NA	False	NA	NA	False	AATAAA	-15	NA	35800931	35907105	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_35801271_35832797_35832901_35863551_35863659_35872665_35872767_35873640_35873776_35879822_35879941_35882483_35882577_35883890_35883988_35885827_35885880_35890667_35890794_35898247_35898384_35903075_35903216_35904253
transcript_178148.known	chr7	+	1584	12	FSM	ENSG00000122545.21	ENST00000435235.6	1584	12	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	366.627155396842	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAAGTACCTTTCCTACA	35799720	True	NA	NA	False	NA	NA	NA	35801038	35904500	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_35801271_35863551_35863659_35872665_35872767_35873640_35873776_35879822_35879941_35882483_35882577_35883890_35883988_35885827_35885880_35890667_35890794_35898247_35898384_35903075_35903216_35904253
transcript_17815.nic	chr1	-	1036	3	ISM	ENSG00000047410.14	ENST00000613151.1	2478	18	-409	17099	-41	2423	5prime_fragment	FALSE	canonical	3	264	junction_1	23.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAGATATTTCTTAGAA	-186374755	True	NA	NA	False	AAAACA	-42	NA	186375734	186370969	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_186371044_186373358_186373464_186374877
transcript_17816.known	chr1	-	515	3	FSM	ENSG00000047410.14	ENST00000451586.1	515	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	134.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAAAGCTTGCGGCTTGA	-186374714	False	979	NA	False	AATGAA	-10	NA	186375693	186373392	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_186373464_186374877_186375187_186375558
transcript_178161.known	chr7	+	583	6	FSM	ENSG00000122545.21	ENST00000634600.1	583	6	0	0	0	0	multi-exon	TRUE	canonical	2	20	junction_1	532.245582414735	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAGGAATGCCAACAGTT	35783518	True	NA	NA	False	AAAAAG	-42	NA	35801215	35879910	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_35801271_35832803_35832901_35863551_35863659_35872665_35872767_35873640_35873776_35879822
transcript_178165.known	chr7	+	509	4	ISM	ENSG00000122545.21	ENST00000672279.1	3095	6	-254	12721	0	-9120	5prime_fragment	FALSE	canonical	0	0	junction_1	539.017212670946	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGTATCCAGGTCCTTC	NA	False	NA	NA	False	NA	NA	NA	35800931	35863613	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_35801271_35831491_35831497_35832797_35832901_35863551
transcript_17817.nic	chr1	-	928	2	ISM	ENSG00000047410.14	ENST00000451586.1	515	3	-41	0	-41	0	intron_retention	FALSE	canonical	3	311	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAAAGCTTGCGGCTTGA	-186374755	True	NA	NA	False	AATGAA	-10	NA	186375734	186373392	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_186373464_186374877
transcript_178170.known	chr7	+	4655	8	FSM	ENSG00000122547.11	ENST00000242108.9	4655	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	4.62027475108464	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTATGGGTTTTGACAAAT	36152091	True	NA	3	True	ATTAAA	-22	NA	36153253	36301538	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_36153675_36154132_36155203_36238984_36239037_36281114_36281226_36284685_36284821_36287638_36287778_36296992_36297188_36299006
transcript_178171.nnic	chr7	+	2827	7	NIC	ENSG00000122547.11	novel	2769	9	NA	NA	-120	0	intron_retention	FALSE	canonical	2	5	junction_4	14.279939308928	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGCTGCAGTGAGAGCATG	NA	False	NA	4	True	AATAAA	-14	NA	36153133	36299725	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_36153675_36154132_36155203_36238984_36239037_36281114_36281226_36287638_36287778_36296992_36297188_36299006
transcript_178175.nnic	chr7	+	2697	6	NIC	ENSG00000122547.11	novel	2769	9	NA	NA	-101	0	intron_retention	FALSE	canonical	0	0	junction_3	17.0575496481763	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGCTGCAGTGAGAGCATG	NA	False	NA	4	True	AATAAA	-14	NA	36153152	36299725	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_36153675_36154132_36155203_36238984_36239037_36287638_36287778_36296992_36297188_36299006
transcript_178180.nic	chr7	+	4887	25	NIC	ENSG00000011426.11	novel	4731	24	NA	NA	-61	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_4	120.206412462989	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGTTTAGGAAGCACT	36384644	True	NA	38	True	AATAAA	-23	NA	36389759	36453791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_36390045_36396265_36396420_36399078_36399394_36406180_36406567_36407733_36407957_36410513_36410705_36411058_36411167_36415757_36415885_36417079_36417191_36419243_36419480_36420168_36420315_36420596_36420745_36421856_36421993_36422632_36422810_36423816_36423944_36424544_36424594_36424685_36424743_36425701_36425741_36426014_36426037_36426915_36427029_36428306_36428361_36439203_36439291_36443754_36443863_36449664_36449838_36452476
transcript_178182.known	chr7	+	4731	24	FSM	ENSG00000011426.11	ENST00000265748.7	4731	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	89.0889405003264	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGTTTAGGAAGCACT	36384746	True	NA	38	True	AATAAA	-23	NA	36389861	36453791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_36390045_36396265_36396420_36399078_36399394_36406180_36406567_36407733_36407957_36410513_36410705_36411058_36411167_36415757_36415885_36417079_36417191_36419243_36419480_36420168_36420315_36420596_36420745_36421856_36421993_36422632_36422810_36423816_36423944_36424544_36424594_36424685_36424743_36425701_36425741_36426014_36426037_36426915_36427029_36439203_36439291_36443754_36443863_36449664_36449838_36452476
transcript_178190.known	chr7	+	4661	23	FSM	ENSG00000011426.11	ENST00000396068.6	4661	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	108.116519635909	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGTTTAGGAAGCACT	36384705	True	NA	38	True	AATAAA	-23	NA	36389820	36453791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_36390045_36396265_36396420_36399078_36399394_36406180_36406567_36407733_36407957_36410513_36410705_36411058_36411167_36415757_36415885_36419243_36419480_36420168_36420315_36420596_36420745_36421856_36421993_36422632_36422810_36423816_36423944_36424544_36424594_36424685_36424743_36425701_36425741_36426014_36426037_36426915_36427029_36439203_36439291_36443754_36443863_36449664_36449838_36452476
transcript_178198.nic	chr7	+	2425	12	ISM	ENSG00000011426.11	ENST00000265748.7	4731	24	-102	33052	-61	3591	5prime_fragment	FALSE	canonical	0	0	junction_4	112.796532975263	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGTATGTACTTTTGTG	36384644	True	NA	NA	False	NA	NA	NA	36389759	36420739	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_36390045_36396265_36396420_36399078_36399394_36406180_36406567_36407733_36407957_36410513_36410705_36411058_36411167_36415757_36415885_36417079_36417191_36419243_36419480_36420168_36420315_36420596
transcript_178201.nic	chr7	+	1623	7	ISM	ENSG00000011426.11	ENST00000396068.6	4661	23	-61	42664	-61	461	5prime_fragment	FALSE	canonical	0	0	junction_4	147.570792804297	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGCGGAAACTCAAAAAGCAA	36384644	True	NA	-17	True	AATATA	-16	NA	36389759	36411127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_36390045_36396265_36396420_36399078_36399394_36406180_36406567_36407733_36407957_36410513_36410705_36411058
transcript_178206.nic	chr7	+	1067	2	ISM	ENSG00000011426.11	ENST00000396068.6	4661	23	18	56665	18	705	5prime_fragment	FALSE	canonical	3	431	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACAGAGGGCAAAACCAAT	36384723	True	NA	NA	False	AATAAA	-13	NA	36389838	36397126	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_36390045_36396265
transcript_178207.nic	chr7	+	1649	2	ISM	ENSG00000011426.11	ENST00000396068.6	4661	23	-61	56162	-61	1208	5prime_fragment	FALSE	canonical	3	431	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCAAGTGTAGTGGCTCA	36384644	True	NA	NA	False	AATAAA	-23	NA	36389759	36397629	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_36390045_36396265
transcript_178210.known	chr7	-	5092	22	FSM	ENSG00000155849.16	ENST00000310758.9	5092	22	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_21	10.3321263284534	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTGATGTTTAAATTCC	-37446470	True	NA	NA	False	AATAAA	-20	NA	37448864	36852905	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_36855752_36861658_36861737_36870392_36870476_36878009_36878118_36887559_36887673_36894853_36895018_37013298_37013436_37096618_37096728_37133129_37133235_37211385_37211518_37213334_37213458_37216644_37216696_37222614_37222694_37224878_37225031_37233094_37233195_37244355_37244392_37259180_37259351_37271831_37271883_37314849_37314923_37315919_37315961_37342612_37342764_37448674
transcript_178211.known	chr7	-	2621	22	FSM	ENSG00000155849.16	ENST00000448602.5	2621	22	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_21	21.803180612178	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCCGGGCCCAGACATG	NA	False	NA	NA	False	NA	NA	NA	37449223	36855550	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_36855752_36861658_36861737_36870392_36870476_36878009_36878118_36887559_36887673_36894853_36895018_37013298_37013436_37096618_37096728_37133129_37133235_37211385_37211518_37213334_37213458_37216644_37216696_37222614_37222694_37224878_37225031_37233094_37233195_37244355_37244392_37259180_37259351_37271831_37271883_37314849_37314923_37315919_37315961_37342612_37342764_37448859
transcript_178220.known	chr7	+	2515	3	FSM	ENSG00000086289.12	ENST00000199448.9	2515	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	5.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATTTGTTATCCTCTCT	37920137	True	NA	NA	False	AATAAA	-24	NA	37920639	37951936	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_37921209_37948839_37949049_37950199
transcript_178221.known	chr7	+	638	2	FSM	ENSG00000086289.12	ENST00000423717.1	638	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCGGTTTTTTGACATCCAG	37920155	True	NA	NA	False	CATAAA	-21	NA	37920657	37950286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_37921209_37950199
transcript_178224.known	chr7	+	1365	10	FSM	ENSG00000010270.14	ENST00000396013.5	1365	10	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	133.492497592862	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGTGTAATAAAATCTG	38174579	True	NA	-24	True	NA	NA	NA	38178350	38230381	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_38178421_38179089_38179146_38207446_38207730_38214356_38214435_38215027_38215106_38217024_38217079_38217187_38217306_38219564_38219661_38228798_38228872_38229922
transcript_178230.known	chr7	+	1703	9	FSM	ENSG00000010270.14	ENST00000009041.12	1703	9	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_4	36.4243651283039	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGTGCTGTTTTTTCA	38174473	True	NA	7	True	ATTAAA	-14	NA	38178244	38230669	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_38178421_38207446_38207730_38214356_38214435_38215027_38215106_38217024_38217079_38217187_38217306_38219564_38219661_38228798_38228872_38229922
transcript_178233.known	chr7	+	1341	8	FSM	ENSG00000010270.14	ENST00000434197.5	1341	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_4	113.590025431598	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAGTGTAATAAAATC	38174491	True	NA	-26	True	NA	NA	NA	38178262	38230379	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_38178421_38207446_38207730_38214356_38214435_38215027_38215106_38217187_38217306_38219564_38219661_38228798_38228872_38229922
transcript_178245.known	chr7	-	3145	20	FSM	ENSG00000078053.17	ENST00000325590.9	3145	20	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_6	8.11789855863636	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTTGATGAGTCTTTT	-38630800	True	NA	-9	True	AATAAA	-30	NA	38631420	38383703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_38384926_38389803_38389906_38391747_38392018_38394004_38394215_38422420_38422478_38426953_38426987_38429841_38429866_38432188_38432213_38436271_38436389_38461282_38461412_38462974_38463114_38465466_38465550_38466172_38466249_38475330_38475417_38476861_38476970_38491049_38491146_38494432_38494528_38503649_38503705_38534930_38535012_38631282
transcript_178257.known	chr7	-	5854	29	FSM	ENSG00000006715.16	ENST00000310301.9	5854	29	0	0	0	0	multi-exon	TRUE	canonical	3	143	junction_15	17.0430128121258	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAATGGTCTATTTATGT	-38903776	True	NA	NA	False	AATAAA	-13	NA	38909191	38722973	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_38726327_38726908_38726989_38728541_38728587_38728691_38728792_38741984_38742122_38743401_38743543_38745558_38745614_38752175_38752314_38754701_38754753_38754894_38754937_38756837_38756983_38758353_38758482_38763454_38763548_38765579_38765662_38767536_38767599_38771197_38771255_38772521_38772638_38774114_38774245_38776678_38776777_38789800_38789868_38795464_38795612_38796744_38796865_38817816_38817883_38821202_38821266_38830253_38830329_38862544_38862623_38869145_38869254_38898090_38898130_38909153
transcript_178267.nic	chr7	-	1152	13	ISM	ENSG00000006715.16	ENST00000310301.9	5854	29	-13	49554	-13	71	5prime_fragment	FALSE	canonical	3	147	junction_5	16.5973558804474	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAAGTACCCTTGATTTT	-38903789	True	NA	NA	False	AAGAAA	-1	NA	38909204	38772527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_38772638_38774114_38774245_38776678_38776777_38789800_38789868_38795464_38795612_38796744_38796865_38817816_38817883_38821202_38821266_38830253_38830329_38862544_38862623_38869145_38869254_38898090_38898130_38909153
transcript_178270.known	chr7	+	871	3	FSM	ENSG00000241127.8	ENST00000223273.7	871	3	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_2	20	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTGTCACTGGTAATT	39562648	True	NA	NA	False	ATTAAA	-17	NA	39566403	39572881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_39566548_39570505_39570628_39572276
transcript_178272.known	chr7	+	660	2	FSM	ENSG00000241127.8	ENST00000474392.1	660	2	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTAATTTACTTTAGTCC	39562629	True	NA	NA	False	GATAAA	-4	NA	39566384	39571002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_39566548_39570505
transcript_178276.known	chr7	+	2787	5	FSM	ENSG00000006451.8	ENST00000005257.7	2787	5	0	0	0	0	multi-exon	FALSE	canonical	3	971	junction_3	31.2209865314983	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTGGTGTTACTTGAT	39614901	True	NA	16	True	AATAAA	-16	NA	39623571	39708120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_39623826_39686630_39686782_39690381_39690591_39696684_39696860_39706122
transcript_178279.nic	chr7	+	605	3	ISM	ENSG00000006451.8	ENST00000005257.7	2787	5	-11	17550	-4	0	5prime_fragment	FALSE	canonical	3	1005	junction_1	23	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCTACAGCTGACTTCAG	39614890	True	NA	NA	False	NA	NA	NA	39623560	39690570	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_39623826_39686630_39686782_39690381
transcript_17828.known	chr1	+	3820	14	FSM	ENSG00000157181.16	ENST00000287859.11	3820	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_11	41.5777591889173	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTGGAATTTTTAAATA	186374206	True	NA	NA	False	AATAAA	-20	NA	186375837	186421375	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_186375975_186379766_186379885_186383021_186383157_186385987_186386084_186388441_186388549_186389587_186389625_186390710_186390852_186391695_186391792_186393946_186394016_186398312_186398442_186398953_186399045_186406082_186406269_186417543_186417655_186419008
transcript_178280.known	chr7	+	705	3	FSM	ENSG00000006451.8	ENST00000468201.1	705	3	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	512	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTCAAATTTACTTTAAAA	39614894	True	NA	95	True	ACTAAA	-24	NA	39623564	39706391	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_39623826_39696684_39696860_39706122
transcript_178283.known	chr7	-	2234	1	FSM	ENSG00000259826.1	ENST00000569710.1	2234	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACGACTATATTTTTGT	-39949738	False	NA	NA	False	ATTAAA	-17	NA	39949755	39947521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_39947500_39949800
transcript_178286.known	chr7	+	5455	14	FSM	ENSG00000065883.17	ENST00000340829.10	5455	14	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_12	17.0783090220682	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGTCAACGTTATTTTTG	39950090	False	NA	41	True	AATAAA	-42	NA	39950120	40095555	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_39951853_39987598_39988259_39997493_39997665_39999360_39999501_40001860_40002032_40045835_40046026_40047820_40047878_40062825_40062928_40063022_40063101_40078004_40078122_40078719_40078852_40088125_40088332_40092964_40093238_40094129
transcript_178287.nic	chr7	+	3021	4	ISM	ENSG00000065883.17	ENST00000613626.4	3099	10	-660	69949	-421	11	5prime_fragment	FALSE	canonical	3	113	junction_3	15.5134350376268	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATTGACTGGGGAAAACG	39948515	False	NA	NA	False	AAGAAA	-3	NA	39949699	39999397	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_39951853_39987598_39988259_39997493_39997665_39999360
transcript_178290.nic	chr7	+	2683	3	ISM	ENSG00000065883.17	ENST00000613626.4	3099	10	-493	71816	-254	-453	5prime_fragment	FALSE	canonical	3	132	junction_2	9.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGTAGAAAAGAAACTCCG	39949831	False	NA	NA	False	AGTAAA	-14	NA	39949866	39997530	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_39951853_39987598_39988259_39997493
transcript_178294.nic	chr7	+	2565	2	ISM	ENSG00000065883.17	ENST00000613626.4	3099	10	-731	81407	-492	-10044	5prime_fragment	FALSE	canonical	3	151	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATTGAACATGCACCT	39949586	True	NA	NA	False	AAGAAA	-2	NA	39949628	39987939	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_39951853_39987598
transcript_178297.nic	chr7	+	2873	2	ISM	ENSG00000065883.17	ENST00000613626.4	3099	10	-731	81099	-492	-9736	5prime_fragment	FALSE	canonical	3	151	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCTGATAGGTAAGTGCA	39949586	True	NA	NA	False	GATAAA	-1	NA	39949628	39988247	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_39951853_39987598
transcript_178298.known	chr7	-	7627	2	FSM	ENSG00000168303.9	ENST00000306984.8	7627	2	0	0	0	0	multi-exon	FALSE	canonical	3	912	junction_1	0	547	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTATATTTACTTTCTCTTC	-40122638	True	NA	NA	False	ATTAAA	-18	NA	40134622	40126026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_40133260_40134228
transcript_178299.known	chr7	+	1563	15	FSM	ENSG00000175600.16	ENST00000628514.3	1563	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	21.6645341703053	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTAATGAATCTAGTGCC	40134384	True	NA	NA	False	NA	NA	NA	40135004	40860631	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_40135121_40180946_40180999_40181954_40182029_40188494_40188581_40189543_40189595_40194939_40195061_40237634_40237727_40274512_40274657_40316759_40316856_40449286_40449359_40459100_40459199_40496283_40496387_40684055_40684134_40749433_40749498_40860315
transcript_178300.known	chr7	+	1617	14	FSM	ENSG00000175600.16	ENST00000335693.9	1617	14	0	0	0	0	multi-exon	FALSE	canonical	2	34	junction_8	11.4555999070659	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTCCTTATTCTACTTA	40134384	True	NA	14	True	AATAAA	-25	NA	40135004	40860763	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_40135121_40180946_40180999_40181954_40182029_40188494_40188581_40189543_40189595_40194939_40195061_40237634_40237727_40274512_40274657_40316759_40316856_40449286_40449359_40459100_40459199_40496283_40496387_40749433_40749498_40860315
transcript_178301.nnic	chr7	+	1556	14	NNC	ENSG00000175600.16	novel	1617	14	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	22.4802345794158	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTCCTTATTCTACTTA	40134349	True	NA	14	True	AATAAA	-25	NA	40134969	40860763	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_40135121_40180946_40180999_40181954_40182029_40188494_40188581_40189543_40189595_40194939_40195061_40237634_40237727_40274512_40274657_40316759_40316856_40449286_40449359_40459100_40459199_40617397_40617405_40749433_40749498_40860315
transcript_178303.known	chr7	+	1341	13	FSM	ENSG00000175600.16	ENST00000401647.7	1341	13	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_7	15.8804124631572	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTAATGAATCTAGTGCC	40134384	True	NA	NA	False	NA	NA	NA	40135004	40860631	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_40135121_40180946_40180999_40181954_40182029_40188494_40188581_40189543_40189595_40194939_40195061_40237634_40237727_40316759_40316856_40449286_40449359_40459100_40459199_40496283_40496387_40749433_40749498_40860315
transcript_178305.known	chr7	-	8237	15	FSM	ENSG00000106571.15	ENST00000678429.1	8237	15	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_14	27.4300594834445	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATTGGGTTGTTTATT	-42227705	False	NA	-5	True	AATAAA	-19	NA	42227721	41960948	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_41966642_41967595_41967924_41972336_41972628_41977557_41977723_41978598_41978749_42023467_42023609_42025263_42025378_42026198_42026413_42040037_42040240_42045383_42045531_42048490_42048697_42076751_42076858_42148225_42148469_42223129_42223296_42227650
transcript_178307.known	chr7	-	8223	15	FSM	ENSG00000106571.15	ENST00000677605.1	8223	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_14	27.8424869872045	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATTGGGTTGTTTATT	-42237138	False	NA	-5	True	AATAAA	-19	NA	42237555	41960948	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_41966642_41967595_41967924_41972336_41972628_41977557_41977723_41978598_41978749_42023467_42023609_42025263_42025378_42026198_42026413_42040037_42040240_42045383_42045531_42048490_42048697_42076751_42076858_42148225_42148469_42223129_42223296_42237498
transcript_178308.known	chr7	-	1765	2	FSM	ENSG00000106571.15	ENST00000428534.2	1765	2	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATCAGCTTTTGGTTATC	-42237453	False	NA	-6	True	AATAAA	-26	NA	42237870	42221617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_42223296_42237783
transcript_178311.known	chr7	-	2430	9	FSM	ENSG00000256646.8	ENST00000442788.5	2430	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3958.81971046927	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTTTTTCATTGTATTG	-42890179	True	NA	-1	True	ATTAAA	-19	NA	42932174	42909272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_42910922_42917513_42917691_42917777_42917836_42921857_42921932_42923324_42923407_42924674_42924798_42926535_42926669_42927382_42927460_42932117
transcript_178313.known	chr7	-	1453	9	FSM	ENSG00000106588.12	ENST00000436986.5	1453	9	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_8	5187.09591046618	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTAATACTTAAGTGTCAAA	-42890159	True	NA	-27	True	AATAAA	-3	NA	42932154	42916881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_42917691_42917777_42917836_42921857_42921932_42923324_42923407_42924674_42924798_42926535_42926669_42927382_42927460_42931095_42931156_42932117
transcript_178316.known	chr7	-	1434	8	FSM	ENSG00000106588.12	ENST00000223321.9	1434	8	0	0	0	0	multi-exon	FALSE	canonical	3	11145	junction_7	556.825623970561	1893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGCTTAAGGCTCTTGT	-42890179	True	NA	-6	True	AATAAA	-24	NA	42932174	42916860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_42917691_42917777_42917836_42921857_42921932_42923324_42923407_42924674_42924798_42926535_42926669_42927382_42927460_42932117
transcript_178319.known	chr7	-	1289	7	FSM	ENSG00000106588.12	ENST00000457444.6	1289	7	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_5	4377.17160072829	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATGGCTTAAGGCTC	-42890171	True	NA	-10	True	AATAAA	-20	NA	42932166	42916864	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_42917691_42917777_42917836_42921857_42921932_42923324_42923407_42924674_42924798_42927382_42927460_42932117
transcript_178320.known	chr7	-	683	6	FSM	ENSG00000106588.12	ENST00000445517.1	683	6	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_5	4718.70369487214	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTCCAGCCTTTTAGGAG	-42890190	True	NA	-41	True	AATAAA	-12	NA	42932185	42917412	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_42917691_42917777_42917836_42921857_42921932_42923324_42923407_42924674_42924798_42932117
transcript_178324.known	chr7	-	1823	2	FSM	ENSG00000136197.14	ENST00000447342.5	1823	2	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGTTTTTCATTGTAT	-42911998	False	NA	-3	True	ATTAAA	-17	NA	42912090	42909274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_42910922_42911914
transcript_178326.known	chr7	-	1743	2	FSM	ENSG00000136197.14	ENST00000438029.1	1743	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTTGTGGAAGTAAGT	-42910796	True	NA	NA	False	ACTAAA	-13	NA	42911910	42909621	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_42910922_42911467
transcript_178330.known	chr7	-	578	2	FSM	ENSG00000136197.14	ENST00000432637.1	578	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTGTTCTTCATGTCTT	-42910830	True	NA	NA	False	NA	NA	NA	42911944	42910645	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_42911194_42911914
transcript_178332.known	chr7	-	2493	8	FSM	ENSG00000256646.8	ENST00000431882.4	2493	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5401.83547792898	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTGCATCTTGCATTAA	-42890187	True	NA	-40	True	NA	NA	NA	42932182	42909311	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_42910922_42912223_42912553_42921857_42921932_42923324_42923407_42924674_42924798_42926535_42926669_42927382_42927460_42932117
transcript_178335.known	chr7	+	859	3	FSM	ENSG00000106591.4	ENST00000223324.3	859	3	0	0	0	0	multi-exon	FALSE	canonical	3	1207	junction_1	5.5	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTTTTGGCTTTGGT	42919633	True	NA	21	True	AATAAA	-24	NA	42932375	42937857	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_42932517_42934954_42935137_42937321
transcript_178336.known	chr7	+	2734	3	FSM	ENSG00000106591.4	ENST00000432845.1	2734	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	569.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGAAGATTCTTTATGTT	42919633	True	NA	NA	False	AGTAAA	-17	NA	42932375	42937627	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_42932517_42934954_42937242_42937321
transcript_178353.known	chr7	-	3223	8	FSM	ENSG00000106603.20	ENST00000438444.5	3223	8	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	535.506931299108	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAATTTGTTGAATGAG	NA	False	NA	NA	False	AATAAA	-25	NA	43729717	43631151	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_43633409_43639448_43639682_43640572_43640650_43645250_43645400_43647534_43647635_43648599_43648653_43665657_43665723_43729428
transcript_178359.known	chr7	-	1520	7	FSM	ENSG00000106603.20	ENST00000446330.6	1520	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	426.800499843506	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTCCCCAGCTTTTAAT	-43714600	True	NA	NA	False	NA	NA	NA	43729513	43608818	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_43609642_43639448_43639682_43640572_43640650_43645250_43645400_43647534_43647635_43648599_43648653_43729428
transcript_178365.known	chr7	-	1085	7	FSM	ENSG00000106603.20	ENST00000310564.10	1085	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_5	552.461059462314	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTCTCATTTCTTTCC	-43714576	True	NA	-7	True	AATAAA	-17	NA	43729489	43639256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_43639682_43640572_43640650_43645250_43645400_43647534_43647635_43648599_43648653_43650492_43650713_43729428
transcript_178368.nic	chr7	-	981	7	ISM	ENSG00000106603.20	ENST00000438444.5	3223	8	177	8105	-17	0	5prime_fragment	FALSE	canonical	3	124	junction_5	499.458178651849	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTCTCATTTCTTTCC	-43714627	True	NA	-7	True	AATAAA	-17	NA	43729540	43639256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_43639682_43640572_43640650_43645250_43645400_43647534_43647635_43648599_43648653_43665657_43665723_43729428
transcript_178371.known	chr7	-	899	6	FSM	ENSG00000106603.20	ENST00000223336.11	899	6	0	0	0	0	multi-exon	FALSE	canonical	3	1063	junction_5	57.9330648248476	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTCTCATTTCTTTCC	-43714610	True	NA	-7	True	AATAAA	-17	NA	43729523	43639256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_43639682_43640572_43640650_43645250_43645400_43647534_43647635_43648599_43648653_43729428
transcript_178378.known	chr7	-	1737	7	FSM	ENSG00000106603.20	ENST00000415076.6	1737	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	435.677250572791	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTCTTGAATGTCATT	-43714600	True	NA	-3	True	AATAAA	-15	NA	43729513	43608455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_43609496_43639448_43639682_43640572_43640650_43645250_43645400_43647534_43647635_43648599_43648653_43729428
transcript_178379.known	chr7	+	3918	7	FSM	ENSG00000164543.7	ENST00000319357.6	3918	7	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_5	16.7007983841093	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAGAGAATGTGAGACAGA	43579657	True	NA	NA	False	ATTAAA	-16	NA	43583107	43627379	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_43583450_43595900_43596114_43608255_43608401_43619596_43619724_43623571_43623621_43623708_43623889_43624517
transcript_178381.nnic	chr7	+	1664	6	NNC	ENSG00000164543.7	novel	3918	7	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	57.8390871297257	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTGTAAATCTCTTGCA	43579614	True	NA	9	True	AGTAAA	-15	NA	43583064	43625184	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_43583450_43595900_43596114_43608255_43608401_43619596_43619724_43623761_43623889_43624517
transcript_178385.nic	chr7	+	448	2	ISM	ENSG00000164543.7	ENST00000319357.6	3918	7	-21	31394	13	-23738	5prime_fragment	FALSE	canonical	3	131	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAAGATTGTCGGATGGA	43579636	True	NA	NA	False	AAAAAG	-8	NA	43583086	43595985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_43583450_43595900
transcript_178386.known	chr7	+	1161	9	FSM	ENSG00000106605.11	ENST00000402924.5	1161	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	201.749225525155	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTATTGTTATGAGCTATG	43755990	True	NA	NA	False	ATTAAA	-20	NA	43758686	43807342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_43758735_43760016_43760111_43771137_43771171_43787903_43788026_43791248_43791369_43792714_43792813_43800464_43800573_43803675_43803848_43806976
transcript_178387.known	chr7	+	1074	8	FSM	ENSG00000106605.11	ENST00000265523.9	1074	8	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_1	47.0075981700223	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTATTGTTATGAGCTATG	43755983	True	NA	NA	False	ATTAAA	-20	NA	43758679	43807342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_43758735_43771137_43771171_43787903_43788026_43791248_43791369_43792714_43792813_43800464_43800573_43803675_43803848_43806976
transcript_178392.known	chr7	-	795	7	FSM	ENSG00000270617.1	ENST00000603700.1	795	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	617.168106938638	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCCTCTCTGTTTTTAC	-43906545	False	NA	-9	True	AATAAA	-15	NA	43906589	43866557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_43866983_43868962_43869075_43869307_43869377_43881658_43881698_43881906_43881958_43887414_43887486_43906561
transcript_178395.known	chr7	-	3571	6	FSM	ENSG00000106608.17	ENST00000453200.6	3571	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_5	16.8095211115606	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGCACAAGTGATGGTA	-43906234	True	NA	NA	False	AATAAA	-16	NA	43906596	43875912	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_43879261_43881658_43881698_43881906_43881958_43887414_43887486_43887789_43887817_43906561
transcript_178396.known	chr7	-	885	6	FSM	ENSG00000106608.17	ENST00000426198.5	885	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	33.7852038620459	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTGCCAGTTTGCACTC	-43926313	True	NA	NA	False	AAGAAA	-16	NA	43926411	43878843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_43879261_43881658_43881698_43881906_43881958_43887414_43887486_43887789_43887817_43926131
transcript_178400.known	chr7	-	3563	5	FSM	ENSG00000106608.17	ENST00000402306.7	3563	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	30.7408522978788	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGCACAAGTGATGGTA	-43906253	True	NA	NA	False	AATAAA	-16	NA	43906615	43875912	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_43879261_43881658_43881698_43881906_43881958_43887414_43887486_43906561
transcript_178403.known	chr7	-	667	4	FSM	ENSG00000062582.14	ENST00000317534.6	667	4	0	0	0	0	multi-exon	FALSE	canonical	3	1000	junction_3	172.762521655852	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCCTCTCTGTTTTTAC	-43861066	True	NA	-9	True	AATAAA	-15	NA	43869517	43866557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_43866983_43868962_43869075_43869307_43869377_43869456
transcript_178404.known	chr7	-	592	4	FSM	ENSG00000106608.17	ENST00000439702.5	592	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	43.4920171474669	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACATTTCTGCTGTGGGC	-43906231	True	NA	NA	False	NA	NA	NA	43906593	43878790	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_43879261_43881658_43881698_43881906_43881958_43906561
transcript_178406.known	chr7	-	743	3	FSM	ENSG00000062582.14	ENST00000418740.5	743	3	0	0	0	0	multi-exon	FALSE	canonical	3	1329	junction_2	33	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTCTTGCCTCTCTGTTT	-43861066	True	NA	-13	True	AATAAA	-11	NA	43869517	43866561	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_43866983_43868962_43869075_43869307
transcript_178407.known	chr7	-	1727	2	FSM	ENSG00000062582.14	ENST00000414932.1	1727	2	0	0	0	0	multi-exon	FALSE	canonical	3	1329	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-43861056	True	NA	NA	False	NA	NA	NA	43869507	43867547	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_43869075_43869307
transcript_17841.known	chr1	+	2879	18	FSM	ENSG00000116711.10	ENST00000367466.4	2879	18	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	3.59642267473712	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGAGATAACTGAGTTTT	186828849	True	NA	NA	False	AATAAA	-20	NA	186828948	186988981	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_186829036_186854285_186854388_186870434_186870517_186893010_186893160_186894097_186894212_186906964_186907003_186911247_186911390_186932762_186932900_186939007_186939231_186939979_186940095_186946636_186946775_186946868_186946962_186950656_186950729_186956101_186956345_186965408_186965594_186977592_186977789_186979314_186979473_186988376
transcript_178432.known	chr7	+	849	8	FSM	ENSG00000078967.13	ENST00000450743.5	849	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	18.1872348146738	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTGTTGTTATGATCTG	43925732	True	NA	NA	False	NA	NA	NA	43926437	43952907	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_43926557_43928013_43928112_43938430_43938495_43942825_43942858_43942953_43943032_43948631_43948738_43950598_43950693_43952649
transcript_178435.known	chr7	+	3982	7	FSM	ENSG00000078967.13	ENST00000222402.8	3982	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_6	8.73053390247253	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAAGTCAATGATTTCCT	43925730	True	NA	13	True	TATAAA	-20	NA	43926435	43956136	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_43926557_43938430_43938495_43942825_43942858_43942953_43943032_43948631_43948738_43950598_43950693_43952649
transcript_178438.known	chr7	+	783	5	FSM	ENSG00000078967.13	ENST00000446008.5	783	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	2.34520787991171	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGGTTGAAGTTGAAGA	43925810	False	NA	4	True	AATAAA	-17	NA	43926515	43949199	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_43926557_43938430_43938495_43942825_43942858_43942953_43943032_43948631
transcript_178439.known	chr7	+	789	5	FSM	ENSG00000078967.13	ENST00000454350.5	789	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	12.9301005409857	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGCCTCAGCCTGGCCCC	43925736	True	NA	NA	False	NA	NA	NA	43926441	43953059	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_43926557_43938430_43938495_43948631_43948738_43950598_43950693_43952649
transcript_17844.known	chr1	+	1157	2	FSM	ENSG00000230426.5	ENST00000662036.1	1157	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATACTGCTATATATATT	187641055	True	NA	NA	False	AATAAA	-15	NA	187641245	187686621	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_187641482_187685700
transcript_178442.nic	chr7	-	509	4	ISM	ENSG00000214783.9	ENST00000427076.5	6466	16	-34	72667	-8	-47222	5prime_fragment	FALSE	canonical	3	79	junction_1	219.715472575076	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCCAGTTTCTCATAATT	-44018730	True	NA	NA	False	ATTAAA	-18	NA	44019183	44013561	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_44013680_44014605_44014784_44016433_44016524_44019060
transcript_178443.known	chr7	-	324	3	FSM	ENSG00000272655.2	ENST00000418424.2	324	3	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	226	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCGGGGCCTGGAGGGGC	-44018660	True	NA	NA	False	NA	NA	NA	44019113	44014602	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44014784_44016433_44016524_44019060
transcript_178448.known	chr7	+	2068	13	FSM	ENSG00000136279.21	ENST00000468694.5	2068	13	0	0	0	0	multi-exon	FALSE	canonical	1	22	junction_8	132.494942251477	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCTGTTGTCTTCCCC	44041376	True	NA	-59	True	NA	NA	NA	44044710	44061637	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44044821_44050224_44050281_44051829_44051943_44052866_44052942_44056756_44056904_44057781_44057860_44058128_44058281_44058428_44058481_44058877_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
transcript_178450.known	chr7	+	2117	13	FSM	ENSG00000136279.21	ENST00000494774.5	2117	13	0	0	0	0	multi-exon	FALSE	canonical	1	98	junction_7	105.629955505055	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCAGTTTGGTCTACACA	44041382	True	NA	20	True	NA	NA	NA	44044716	44061716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44044821_44050224_44050281_44051829_44051943_44052866_44052942_44056756_44056904_44057781_44057860_44058128_44058281_44058428_44058481_44058901_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
transcript_178459.nnic	chr7	+	1924	12	NNC	ENSG00000136279.21	novel	1622	12	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	128.659008607512	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTTCAGGAAAAGTAACAC	NA	False	NA	65	True	NA	NA	NA	44044626	44061609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_44044821_44050224_44050265_44052910_44052942_44056756_44056904_44057781_44057860_44058128_44058281_44058431_44058481_44058901_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
transcript_17846.known	chr1	+	522	1	FSM	ENSG00000231767.4	ENST00000647225.1	522	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTATGACTTAATAAAAGA	NA	False	NA	NA	False	NA	NA	NA	192716131	192716653	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_192716100_192716700
transcript_178460.nnic	chr7	+	2031	12	NNC	ENSG00000136279.21	novel	2117	13	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	128.659008607512	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCAGTTTGGTCTACACA	NA	False	NA	20	True	NA	NA	NA	44044626	44061716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_44044821_44050224_44050265_44052910_44052942_44056756_44056904_44057781_44057860_44058128_44058281_44058431_44058481_44058901_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
transcript_178464.known	chr7	+	1241	12	FSM	ENSG00000136279.21	ENST00000456905.5	1241	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	142.698549512803	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGACATGGCTTCCTTA	44041338	True	NA	NA	False	NA	NA	NA	44044672	44060943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44044821_44050224_44050281_44051829_44051943_44052866_44052942_44057781_44057860_44058128_44058281_44058428_44058481_44058901_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
transcript_178466.known	chr7	+	1513	12	FSM	ENSG00000136279.21	ENST00000452943.5	1513	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	144.548885036479	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCCCTGCCTGTGGCCA	44041367	True	NA	NA	False	NA	NA	NA	44044701	44061172	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44044821_44050224_44050281_44051829_44051943_44056756_44056904_44057781_44057860_44058128_44058281_44058428_44058481_44058901_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
transcript_178468.known	chr7	+	1622	12	FSM	ENSG00000136279.21	ENST00000429716.5	1622	12	0	0	0	0	multi-exon	FALSE	canonical	1	30	junction_2	122.184997253014	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGACCCTTGGGAACAGT	44041373	True	NA	NA	False	NA	NA	NA	44044707	44061328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44044821_44050224_44050281_44052866_44052942_44056756_44056904_44057781_44057860_44058128_44058281_44058431_44058481_44058901_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
transcript_17847.known	chr1	+	1348	5	FSM	ENSG00000116741.8	ENST00000235382.7	1348	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_4	5.11737237261468	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTGGAGTCTAGATGTGA	192807953	True	NA	14	True	AATAAA	-25	NA	192809038	192812275	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_192809182_192810165_192810268_192810369_192810432_192810980_192811148_192811401
transcript_178477.known	chr7	+	1447	11	FSM	ENSG00000136279.21	ENST00000411855.5	1447	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	148.344902170584	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCATCTGGGAGGCTCTG	44041385	True	NA	NA	False	NA	NA	NA	44044719	44061237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44044821_44050224_44050281_44056756_44056904_44057781_44057860_44058128_44058281_44058428_44058481_44058901_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
transcript_178479.known	chr7	+	1415	11	FSM	ENSG00000136279.21	ENST00000440166.5	1415	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	131.707858535472	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCTTGCCCCTGACAGGA	44041341	True	NA	NA	False	NA	NA	NA	44044675	44061145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44044821_44052866_44052942_44056756_44056904_44057781_44057860_44058128_44058281_44058431_44058481_44058901_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
transcript_178480.known	chr7	-	837	3	FSM	ENSG00000164708.6	ENST00000297283.4	837	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	2.5	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGAGTCCAGCGCAGCC	-44065369	True	NA	-1	True	AATAAA	-17	NA	44065567	44062726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44062931_44064831_44065013_44065115
transcript_178481.known	chr7	+	615	2	FSM	ENSG00000136279.21	ENST00000439983.5	615	2	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATCACTGCAGATAGTCA	44041341	True	NA	NA	False	NA	NA	NA	44044675	44050694	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44044821_44050224
transcript_178484.known	chr7	+	1854	11	FSM	ENSG00000136279.21	ENST00000441840.7	1854	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	148.731603904483	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTTCAGGAAAAGTAACAC	44041351	True	NA	65	True	NA	NA	NA	44044685	44061609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44044821_44050224_44050265_44056739_44056904_44057781_44057860_44058128_44058281_44058428_44058481_44058901_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
transcript_178492.known	chr7	-	2561	11	FSM	ENSG00000122678.17	ENST00000430942.5	2561	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	20.7566856699233	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATGCAGTAAAGTTGA	-44081286	True	NA	NA	False	ATTAAA	-11	NA	44082514	44072261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44073378_44073624_44073709_44073782_44074026_44074130_44074221_44074397_44074531_44076508_44076630_44078755_44078812_44079570_44079742_44079860_44079960_44080732_44080917_44082250
transcript_178496.nic	chr7	-	2704	11	NIC	ENSG00000122678.17	novel	2806	11	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	15.7990506043876	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGACTCTTGGGGTGC	NA	False	NA	NA	False	ATTAAA	-23	NA	44082563	44072249	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_44073431_44073624_44073709_44073782_44074026_44074130_44074234_44074397_44074531_44076508_44076630_44078739_44078812_44079570_44079742_44079860_44079960_44080732_44080917_44082250
transcript_178499.nic	chr7	-	2533	10	NIC	ENSG00000122678.17	novel	2806	11	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_5	19.3645979643521	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTCTTGGGGTGCAGT	NA	False	NA	NA	False	ATTAAA	-26	NA	44082563	44072246	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_44073378_44073624_44073709_44073782_44074026_44074130_44074234_44074397_44074531_44078739_44078812_44079570_44079742_44079860_44079960_44080732_44080917_44082250
transcript_178500.nic	chr7	-	2517	10	NIC	ENSG00000122678.17	novel	2806	11	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_5	18.8882352828094	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTCTTGGGGTGCAGT	NA	False	NA	NA	False	ATTAAA	-26	NA	44082563	44072246	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_44073378_44073624_44073709_44073782_44074026_44074130_44074234_44074397_44074531_44078755_44078812_44079570_44079742_44079860_44079960_44080732_44080917_44082250
transcript_178504.known	chr7	-	2444	10	FSM	ENSG00000122678.17	ENST00000335195.10	2444	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	23.2379000772445	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTCTTGGGGTGCAGT	-44081236	True	NA	NA	False	ATTAAA	-26	NA	44082464	44072246	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44073378_44073624_44073709_44073782_44074026_44074397_44074523_44076508_44076630_44078739_44078812_44079570_44079742_44079860_44079960_44080732_44080917_44082250
transcript_17852.known	chr1	-	1346	12	FSM	ENSG00000116750.14	ENST00000367451.8	1346	12	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	169.214373302717	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAATGAAAGTGATATTAA	-193050727	True	NA	-21	True	CATAAA	-38	NA	193059349	193016161	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_193016396_193021096_193021196_193022925_193023037_193023843_193023947_193027874_193027956_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
transcript_178536.known	chr7	-	1649	6	FSM	ENSG00000122678.17	ENST00000492605.5	1649	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	22.0272558436134	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGGGAAGGAATGAATTCG	-44081250	True	NA	NA	False	NA	NA	NA	44082478	44075718	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44076630_44078755_44078812_44079570_44079742_44079860_44079960_44080732_44080917_44082250
transcript_178537.known	chr7	-	1149	5	FSM	ENSG00000122678.17	ENST00000492312.5	1149	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	12.4599357943771	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGACTACAGGCATGTGCCA	-44081256	True	NA	NA	False	NA	NA	NA	44082484	44078350	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44078812_44079570_44079742_44079860_44079960_44080732_44080917_44082250
transcript_178539.nnic	chr7	+	4092	22	NNC	ENSG00000106624.11	novel	4097	21	NA	NA	-50	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	51.881252867418	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGACTGCTCACATTCTGAG	44101707	True	NA	6	True	AATAAA	-15	NA	44104294	44114560	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_44104629_44104683_44104919_44106545_44106888_44107438_44107511_44107628_44107701_44107808_44107932_44108006_44108085_44108898_44108977_44109106_44109185_44109287_44109342_44110014_44110125_44110206_44110347_44110724_44110810_44110912_44111058_44111153_44111240_44111506_44111631_44111853_44112051_44112141_44112322_44112557_44112910_44112990_44113131_44113251_44113352_44113593
transcript_178546.known	chr7	+	4097	21	FSM	ENSG00000106624.11	ENST00000223357.8	4097	21	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	33.3695594816593	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGACTGCTCACATTCTGAG	44101757	True	NA	6	True	AATAAA	-15	NA	44104344	44114560	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44104919_44106545_44106888_44107438_44107511_44107628_44107701_44107808_44107932_44108006_44108085_44108898_44108977_44109106_44109185_44109287_44109342_44110014_44110125_44110206_44110347_44110724_44110810_44110912_44111058_44111153_44111240_44111506_44111631_44111853_44112051_44112141_44112322_44112557_44112910_44112990_44113131_44113251_44113352_44113593
transcript_17857.known	chr1	-	1355	12	FSM	ENSG00000116750.14	ENST00000367450.7	1355	12	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	174.000189987547	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACTGTTAGTTTTCTGGT	-193059182	False	NA	38	True	NA	NA	NA	193059296	193016102	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_193016396_193021096_193021196_193022925_193023040_193023843_193023947_193027874_193027956_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
transcript_17858.known	chr1	-	1534	12	FSM	ENSG00000116750.14	ENST00000367448.5	1534	12	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	158.620447234875	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTGAGACTTCTATTT	-193050739	True	NA	NA	False	AATAAA	-20	NA	193059361	193018404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_193018821_193020306_193020382_193021096_193021196_193022925_193023037_193023843_193023947_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
transcript_178580.nic	chr7	-	1570	11	NIC	ENSG00000106628.12	novel	1609	11	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_4	546.777367856425	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTGAGCCCTGGGCACT	-44106412	True	NA	-7	True	AATAAA	-22	NA	44123580	44114687	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_44114946_44115294_44115397_44115765_44115894_44116114_44116210_44116429_44116511_44116816_44117016_44117132_44117248_44117618_44117743_44117942_44118065_44121833_44122110_44123510
transcript_178586.known	chr7	-	1609	11	FSM	ENSG00000106628.12	ENST00000610533.6	1609	11	0	0	0	0	multi-exon	FALSE	canonical	3	959	junction_10	251.695629679977	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGGGCACTCTGGCTAT	-44106380	True	NA	1	True	AATAAA	-30	NA	44123548	44114679	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44114946_44115294_44115397_44115765_44115894_44116114_44116273_44116429_44116511_44116816_44117016_44117132_44117248_44117618_44117743_44117942_44118065_44121833_44122110_44123510
transcript_178587.nnic	chr7	-	1692	11	NIC	ENSG00000106628.12	novel	1659	11	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	42	junction_10	514.254761766967	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTGAGCCCTGGGCACT	-44106385	True	NA	-7	True	AATAAA	-22	NA	44123553	44114687	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_44114946_44115294_44115397_44115765_44115894_44116114_44116273_44116429_44116511_44116816_44117016_44117132_44117248_44117618_44117743_44117942_44118065_44121833_44122196_44123510
transcript_178588.known	chr7	-	1659	11	FSM	ENSG00000106628.12	ENST00000452185.5	1659	11	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_10	500.176968682086	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAAAAAAGTGGTTTTGAC	-44106362	True	NA	-33	True	GGGGCT	-11	NA	44123530	44114784	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44114946_44115294_44115397_44115765_44115894_44116114_44116273_44116429_44116511_44116816_44117016_44117132_44117248_44117618_44117743_44117942_44118065_44121833_44122283_44123510
transcript_178633.known	chr7	-	612	7	FSM	ENSG00000106631.8	ENST00000223364.7	612	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	2.91070819942883	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGTGGTGTCTTGTCTG	-44141087	False	245	2	True	AATAAA	-20	NA	44141332	44138863	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44139023_44139520_44139570_44139781_44139861_44140322_44140428_44140711_44140788_44140960_44141075_44141302
transcript_178634.known	chr7	-	646	6	FSM	ENSG00000106631.8	ENST00000457314.5	646	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	2.57681974534503	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAATTGCTGTGGTGTCTT	-44140829	False	NA	-3	True	AATAAA	-15	NA	44141074	44138868	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44139023_44139520_44139570_44139781_44139861_44140322_44140428_44140711_44140857_44140960
transcript_178635.nic	chr7	-	1473	3	ISM	ENSG00000106633.18	ENST00000672743.1	846	4	-202	503	3	0	5prime_fragment	FALSE	canonical	2	6	junction_2	26.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCCTGTCCACTGTTCT	-44145896	True	NA	-4	True	ATTAAA	-19	NA	44146141	44144274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_44145281_44145496_44145731_44145908
transcript_178636.known	chr7	-	1311	3	FSM	ENSG00000106633.18	ENST00000336642.9	1311	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	4	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCCTGTCCACTGTTCT	-44145899	True	NA	-4	True	ATTAAA	-19	NA	44146144	44144274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44145281_44145496_44145731_44146073
transcript_178637.known	chr7	-	1641	2	FSM	ENSG00000106633.18	ENST00000459642.1	1641	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTGTCCACTGTTCTTT	-44145884	True	NA	-2	True	ATTAAA	-21	NA	44146129	44144272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44145281_44145496
transcript_178638.known	chr7	-	2745	10	FSM	ENSG00000106633.18	ENST00000403799.8	2745	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	18.5419111511139	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCCTGTCCACTGTTCT	NA	False	NA	-4	True	ATTAAA	-19	NA	44189439	44144274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44145281_44145496_44145731_44146462_44146619_44147649_44147834_44149759_44149860_44149968_44150065_44150955_44151076_44152270_44152426_44153300_44153464_44188908
transcript_17864.known	chr1	-	5184	11	FSM	ENSG00000116750.14	ENST00000367454.6	5184	11	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_3	73.733642253723	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGTCTCATGTAGGTGTA	-193050738	True	NA	-7	True	AATAAA	-17	NA	193059360	193012253	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_193016396_193021096_193021196_193022925_193023037_193023843_193023947_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
transcript_178640.known	chr7	+	1085	8	FSM	ENSG00000106636.9	ENST00000677090.1	1085	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_6	178.822338010184	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGGAGGTCGGAGCCAGC	44189579	True	NA	71	True	NA	NA	NA	44201011	44212595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44201240_44204567_44204651_44206384_44206486_44207387_44207493_44208132_44208199_44211022_44211125_44211553_44211605_44212246
transcript_178642.known	chr7	+	2737	7	FSM	ENSG00000106636.9	ENST00000677436.1	2737	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	150.04628915401	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGTCTTGAAATTTCACA	44189550	True	NA	13	True	NA	NA	NA	44200982	44214276	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44201240_44204574_44204651_44206384_44206486_44207387_44207493_44208132_44208199_44211022_44211125_44212246
transcript_178646.known	chr7	+	1270	6	FSM	ENSG00000106636.9	ENST00000496112.5	1270	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	166.334121574619	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGGCTTCCCGCAGAGG	44189535	True	NA	NA	False	NA	NA	NA	44200967	44212889	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44201240_44204567_44204651_44206384_44206486_44207387_44207493_44208132_44208199_44212246
transcript_17865.known	chr1	-	5327	11	FSM	ENSG00000116750.14	ENST00000367455.8	5327	11	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_3	91.4625606464197	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCATGTAGGTGTATTTT	-193059382	False	NA	-3	True	AATAAA	-21	NA	193059496	193012249	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_193016396_193021096_193021196_193022925_193023040_193023843_193023947_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
transcript_178657.known	chr7	-	8036	6	FSM	ENSG00000015676.18	ENST00000355451.8	8036	6	0	0	0	0	multi-exon	TRUE	canonical	3	277	junction_2	14.4416065588286	474	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTGAGTTGCTTTTCT	-44487835	True	NA	-8	True	TATAAA	-7	NA	44490658	44379118	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44386122_44392296_44392486_44404439_44404584_44427570_44427704_44484967_44485285_44490408
transcript_178664.known	chr7	+	408	1	FSM	ENSG00000146677.7	ENST00000487895.1	408	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTCGTGTGCACGTTTT	44467712	False	NA	NA	False	AAGAAA	-9	NA	44467896	44468304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44467900_44468300
transcript_178680.known	chr7	-	1853	14	FSM	ENSG00000136271.11	ENST00000446987.5	1853	14	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_10	132.364656788978	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCCTCCAGCATATG	-44573842	False	11171	-20	True	AATAAA	-17	NA	44573895	44565803	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44566080_44566447_44566525_44568117_44568224_44568902_44568993_44569129_44569204_44569808_44569904_44570014_44570129_44570757_44570878_44571491_44571737_44572346_44572438_44572562_44572745_44572889_44573051_44573582_44573745_44573835
transcript_178688.known	chr7	-	2294	5	FSM	ENSG00000158604.15	ENST00000457408.7	2294	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	193.001295332441	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCTCCTTTTGTTATTT	-44571060	True	NA	NA	False	ATTAAA	-23	NA	44582231	44577893	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44579629_44581092_44581240_44581448_44581575_44581722_44581824_44582046
transcript_178693.known	chr7	-	2203	4	FSM	ENSG00000158604.15	ENST00000289577.9	2203	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	184.287818371156	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCTCCTTTTGTTATTT	-44582234	False	NA	NA	False	ATTAAA	-23	NA	44582287	44577893	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44579629_44581448_44581575_44581722_44581824_44582046
transcript_178694.known	chr7	-	1755	4	FSM	ENSG00000158604.15	ENST00000481238.1	1755	4	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_1	68.7168101704379	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATAGCCATTGCCTACCT	-44571060	True	NA	-8	True	AATAAA	-27	NA	44582231	44579896	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44581240_44581448_44581575_44581722_44581824_44582046
transcript_178695.known	chr7	+	1158	1	FSM	ENSG00000287574.1	ENST00000658337.1	1158	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTCAGTGTGTGTCTCTA	44582450	True	NA	NA	False	ATTAAA	-36	NA	44582518	44583676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44582500_44583700
transcript_178698.known	chr7	+	3474	24	FSM	ENSG00000105953.16	ENST00000447398.5	3474	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	120.914958632801	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGAGGGGTCAGCTCTGGC	44599204	True	NA	NA	False	NA	NA	NA	44606590	44708278	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44606654_44624316_44624566_44645326_44645519_44647443_44647535_44656317_44656363_44666735_44666852_44673786_44673942_44674410_44674558_44675177_44675269_44675969_44676150_44681719_44681849_44693824_44694005_44694423_44694577_44696024_44696128_44696428_44696558_44696913_44697065_44697369_44697498_44697603_44697783_44698191_44698264_44700140_44700270_44701542_44701616_44707224_44707389_44707581_44707737_44707878
transcript_178702.known	chr7	+	3479	23	FSM	ENSG00000105953.16	ENST00000449767.5	3479	23	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	100.002861529306	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATAGGAACTGGGCCTTGT	44599204	True	NA	NA	False	NA	NA	NA	44606590	44708328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44606654_44624316_44624566_44645326_44645519_44647443_44647535_44666735_44666852_44673786_44673942_44674410_44674558_44675177_44675269_44675969_44676150_44681719_44681849_44693824_44694005_44694423_44694577_44696024_44696128_44696428_44696558_44696913_44697065_44697369_44697498_44697603_44697783_44698191_44698264_44700140_44700270_44701542_44701616_44707224_44707389_44707581_44707737_44707878
transcript_178706.known	chr7	+	4193	23	FSM	ENSG00000105953.16	ENST00000222673.6	4193	23	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_4	36.4868367524282	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCATGTCTGCTGTGTCTTT	44599240	True	NA	10	True	CATAAA	-17	NA	44606626	44709066	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44606654_44624316_44624566_44645326_44645519_44647656_44647760_44666735_44666852_44673786_44673942_44674410_44674558_44675177_44675269_44675969_44676150_44681719_44681849_44693824_44694005_44694423_44694577_44696024_44696128_44696428_44696558_44696913_44697065_44697369_44697498_44697603_44697783_44698191_44698264_44700140_44700270_44701542_44701616_44707224_44707389_44707581_44707737_44707878
transcript_178717.known	chr7	+	1744	9	FSM	ENSG00000105953.16	ENST00000443864.6	1744	9	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_4	40.2336923485777	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTATGTGTGTGTGTGTG	44599201	True	NA	3	True	AATAAA	-24	NA	44606587	44676594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44606654_44624316_44624566_44645326_44645519_44647656_44647760_44666735_44666852_44673786_44673942_44674410_44674558_44675177_44675269_44675969
transcript_178723.known	chr7	+	818	6	FSM	ENSG00000196262.15	ENST00000355968.10	818	6	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_2	8349.59779630133	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCGTTTGAGTTAAGAGT	44515098	True	NA	3	True	AATAAA	-17	NA	44796680	44801631	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44796794_44798747_44798815_44799246_44799278_44799391_44799481_44799701_44799875_44801286
transcript_178724.known	chr7	+	907	6	FSM	ENSG00000196262.15	ENST00000489459.5	907	6	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_2	8361.43465201995	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTCGTTTGAGTTAAGAG	44515098	True	NA	2	True	AATAAA	-16	NA	44796680	44801630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44796794_44798747_44798905_44799246_44799278_44799391_44799481_44799701_44799875_44801286
transcript_178725.known	chr7	+	2237	5	FSM	ENSG00000196262.15	ENST00000468812.6	2237	5	0	0	0	0	multi-exon	FALSE	canonical	3	17102	junction_2	776.443816383388	3583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTAGTATTTCTTATTCC	44515098	True	NA	30	True	AATAAA	-21	NA	44796680	44803117	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44796794_44799246_44799278_44799391_44799481_44799701_44799875_44801286
transcript_178727.known	chr7	+	2782	5	FSM	ENSG00000196262.15	ENST00000678789.1	2782	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	7470.41409494815	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTTCATTATCCCTAGT	44515369	False	NA	18	True	AATAAA	-9	NA	44796951	44803105	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44797622_44799246_44799278_44799391_44799481_44799701_44799875_44801286
transcript_178731.known	chr7	+	446	2	FSM	ENSG00000196262.15	ENST00000620047.5	446	2	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCGTTTGAGTTAAGAGT	44515110	True	NA	3	True	AATAAA	-17	NA	44796692	44801631	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44796794_44801286
transcript_178732.known	chr7	+	2460	2	FSM	ENSG00000196262.15	ENST00000678643.1	2460	2	0	0	0	0	multi-exon	FALSE	canonical	3	19040	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTAAATAACAATTGTC	44515118	True	NA	-15	True	NA	NA	NA	44796700	44801613	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44796794_44799246
transcript_178738.known	chr7	-	3804	5	FSM	ENSG00000105968.19	ENST00000222690.10	3804	5	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	1203.63291227018	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTATGGACTAAATATTT	-44828451	True	NA	NA	False	ATTAAA	-18	NA	44848077	44826790	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44830164_44835528_44835659_44840898_44841013_44843276_44843355_44847968
transcript_178745.known	chr7	-	3026	5	FSM	ENSG00000105968.19	ENST00000308153.9	3026	5	0	0	0	0	multi-exon	FALSE	canonical	3	2506	junction_4	258.780191475314	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTTGTTCTGTTTTGC	-44828461	True	NA	-2	True	TATAAA	-18	NA	44848087	44831977	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44834563_44835528_44835659_44840898_44841013_44843276_44843355_44847968
transcript_178751.known	chr7	-	589	4	FSM	ENSG00000105968.19	ENST00000437072.5	589	4	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	1116.66835820767	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTATGTTTGACCTTTT	-44828456	True	NA	NA	False	TATAAA	-6	NA	44848082	44829896	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44830164_44835528_44835659_44843276_44843355_44847968
transcript_178753.known	chr7	-	687	4	FSM	ENSG00000105968.19	ENST00000350771.7	687	4	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_3	1390.98941604728	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTCAAAACTGTTCTG	-44828450	True	NA	-8	True	GATAAA	-20	NA	44848076	44834227	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44834563_44835528_44835659_44840898_44841013_44847968
transcript_178754.known	chr7	-	596	4	FSM	ENSG00000105968.19	ENST00000349299.7	596	4	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_2	1281.088686322	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTCAAAACTGTTCTG	-44828395	True	NA	-8	True	GATAAA	-20	NA	44848021	44834227	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44834563_44835528_44835659_44843276_44843355_44847968
transcript_178755.known	chr7	-	628	4	FSM	ENSG00000105968.19	ENST00000381124.9	628	4	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_1	1126.25761805291	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAAATTAATTTGTCTCA	-44828454	True	NA	-19	True	GATAAA	-9	NA	44848080	44834238	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44834563_44840898_44841013_44843276_44843355_44847968
transcript_178759.known	chr7	-	1041	4	FSM	ENSG00000105968.19	ENST00000446531.1	1041	4	0	0	0	0	multi-exon	FALSE	canonical	3	2506	junction_3	244.464494127243	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGTCCCAGCTACTCAGG	-44828457	True	NA	NA	False	AATACA	-30	NA	44848083	44834924	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44835659_44840898_44841013_44843276_44843355_44847968
transcript_17876.known	chr1	-	1507	11	FSM	ENSG00000116750.14	ENST00000367449.5	1507	11	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	133.04469173928	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTGAGACTTCTATTT	-193059295	False	NA	NA	False	AATAAA	-20	NA	193059409	193018404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_193018821_193021096_193021196_193022925_193023037_193023843_193023947_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
transcript_178763.known	chr7	-	439	3	FSM	ENSG00000105968.19	ENST00000521529.5	439	3	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_2	72	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTGTGTGTTGATTGGC	-44828414	True	NA	-5	True	GATAAA	-20	NA	44848040	44834309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44834563_44840898_44841013_44847968
transcript_178768.known	chr7	-	505	5	FSM	ENSG00000232956.10	ENST00000584327.5	505	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	202.791765118804	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTCTCTGCTTCCAGAAT	-44980648	False	NA	-117	True	NA	NA	NA	44986560	44983136	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44983323_44983821_44983958_44984356_44984427_44986020_44986098_44986524
transcript_178770.known	chr7	-	953	5	FSM	ENSG00000232956.10	ENST00000585030.6	956	5	0	3	0	-1	multi-exon	FALSE	canonical	3	34	junction_3	194.497268618354	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTAGTCTTGCCTGTTT	-44980757	True	NA	-6	True	AATAAA	-17	NA	44986669	44983025	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44983323_44983821_44984047_44984356_44984427_44985881_44986098_44986524
transcript_178771.known	chr7	-	982	5	FSM	ENSG00000232956.10	ENST00000578968.6	986	5	0	4	0	0	multi-exon	FALSE	canonical	3	342	junction_3	67.2806621548867	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTCTTGCCTGTTTTTT	NA	False	NA	-3	True	AATAAA	-20	NA	44986834	44983022	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44983323_44983821_44984047_44984356_44984427_44986020_44986098_44986524
transcript_178772.known	chr7	-	1346	4	FSM	ENSG00000232956.10	ENST00000668580.1	1346	4	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_2	69.4422221866655	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTCTTGCCTGTTTTTT	-44980787	True	NA	-3	True	AATAAA	-20	NA	44986699	44983022	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44984047_44984356_44984427_44986020_44986098_44986524
transcript_178773.known	chr7	-	2344	4	FSM	ENSG00000232956.10	ENST00000653305.1	2344	4	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_2	39.0412886854702	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCTGGTATCTCCTGAAT	-44980753	True	NA	-66	True	NA	NA	NA	44986665	44983085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44983323_44983821_44984047_44984356_44986098_44986524
transcript_178774.known	chr7	-	731	4	FSM	ENSG00000232956.10	ENST00000579383.6	732	4	0	1	0	-1	multi-exon	FALSE	canonical	3	39	junction_2	219.077358229665	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTAGTCTTGCCTGTTT	-44980744	True	NA	-6	True	AATAAA	-17	NA	44986656	44983025	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44983323_44983821_44984047_44986020_44986098_44986524
transcript_178776.known	chr7	-	1123	4	FSM	ENSG00000232956.10	ENST00000667823.2	1124	4	0	1	0	-1	multi-exon	FALSE	canonical	3	342	junction_2	76.4475128583149	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTAGTCTTGCCTGTTT	-44980756	True	NA	-6	True	AATAAA	-17	NA	44986668	44983025	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44983323_44983821_44984427_44986020_44986098_44986524
transcript_178777.known	chr7	-	2998	3	FSM	ENSG00000232956.10	ENST00000580528.2	2998	3	0	0	0	0	multi-exon	FALSE	canonical	3	495	junction_1	8.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTAAATATGTGATTTAG	NA	False	NA	-18	True	AATAAA	-5	NA	44986961	44983037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44983323_44983821_44986098_44986524
transcript_178778.known	chr7	-	1626	3	FSM	ENSG00000232956.10	ENST00000582727.3	1637	3	6	5	-5	-3	multi-exon	FALSE	canonical	3	342	junction_1	85	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATTTAGTCTTGCCTGT	-44980762	True	NA	-8	True	AATAAA	-15	NA	44986674	44983027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44984427_44986020_44986098_44986524
transcript_178779.known	chr7	-	3228	2	FSM	ENSG00000232956.10	ENST00000667119.1	3228	2	0	0	0	0	multi-exon	FALSE	canonical	3	512	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATTTAAATATGTGATTTA	-44980781	True	NA	-19	True	AATAAA	-4	NA	44986693	44983038	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_44986098_44986524
transcript_178784.known	chr7	+	1983	10	FSM	ENSG00000136280.17	ENST00000461377.5	1983	10	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	105.388288524032	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGGCTGGGCCCTTGGACG	NA	False	NA	-73	True	NA	NA	NA	44999474	45076352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_44999858_45038252_45038427_45063917_45064002_45064462_45064647_45068442_45068580_45069825_45069962_45072725_45072784_45073459_45073572_45074269_45074409_45075776
transcript_178786.known	chr7	+	1864	10	FSM	ENSG00000136280.17	ENST00000258781.11	1864	10	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_1	42.9834880729052	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGTTGCCAAGCATGT	44998343	True	NA	28	True	AAAAAG	-28	NA	45000200	45076453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_45000364_45038252_45038427_45063917_45064002_45064462_45064647_45068442_45068580_45069825_45069962_45072725_45072784_45073459_45073572_45074269_45074409_45075776
transcript_178791.nnic	chr7	+	1670	9	NIC	ENSG00000136280.17	novel	1983	10	NA	NA	240	0	combination_of_known_splicesites	FALSE	canonical	2	14	junction_1	131.203980027284	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGTTGCCAAGCATGT	NA	False	NA	28	True	AAAAAG	-28	NA	44999714	45076453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_44999858_45063917_45064002_45064462_45064647_45068442_45068580_45069825_45069962_45072725_45072784_45073459_45073572_45074269_45074409_45075776
transcript_178794.known	chr7	+	1719	9	FSM	ENSG00000136280.17	ENST00000488727.5	1719	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	132.037340835841	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCTTAAAAAGAAGTTTAC	44998391	True	NA	-11	True	NA	NA	NA	45000248	45076414	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_45000364_45038252_45038427_45063917_45064002_45064462_45064647_45068442_45068580_45069825_45069962_45073459_45073572_45074269_45074409_45075776
transcript_178797.known	chr7	+	1719	9	FSM	ENSG00000136280.17	ENST00000541586.5	1719	9	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	112.09008653757	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTCTGATCCAGTTGGG	44998330	True	NA	44	True	AAAAAG	-44	NA	45000187	45076469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_45000364_45063917_45064002_45064462_45064647_45068442_45068580_45069825_45069962_45072725_45072784_45073459_45073572_45074269_45074409_45075776
transcript_178801.known	chr7	+	1620	8	FSM	ENSG00000136280.17	ENST00000544363.5	1620	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	133.30569441425	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTCTGATCCAGTTGGG	44998330	True	NA	44	True	AAAAAG	-44	NA	45000187	45076469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_45000364_45038252_45038427_45063917_45064002_45064462_45064647_45072725_45072784_45073459_45073572_45074269_45074409_45075776
transcript_17881.nic	chr1	+	2986	10	NIC	ENSG00000116747.13	novel	8291	9	NA	NA	-824	0	intron_retention	FALSE	canonical	1	1	junction_3	32.8261413442938	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAGGAAA	193058612	True	NA	16	True	AATGAA	-44	NA	193058629	193084866	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_193059777_193069033_193069635_193070553_193070620_193075819_193076041_193076500_193076648_193076912_193077051_193081363_193081481_193082185_193082300_193082561_193082709_193084578
transcript_178811.nnic	chr7	+	1353	6	NIC	ENSG00000136280.17	novel	1864	10	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_2	156.412787201047	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGTTGCCAAGCATGT	44998313	True	NA	28	True	AAAAAG	-28	NA	45000170	45076453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_45000364_45038252_45038427_45072725_45072784_45073459_45073572_45074269_45074409_45075776
transcript_178815.nnic	chr7	-	988	5	Antisense	novelGene_ENSG00000136280.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	24.3246274380513	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCTGGCTCTGCATGAA	-44999381	True	NA	-5	True	AATAAA	-19	NA	45000008	44988767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr7_-_44989018_44992612_44992850_44995028_44995145_44999279_44999374_44999717
transcript_178819.nnic	chr7	-	901	4	Antisense	novelGene_ENSG00000136280.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	27.956315128349	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCTGGCTCTGCATGAA	-44999388	True	NA	-5	True	AATAAA	-19	NA	45000015	44988767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr7_-_44989018_44992612_44992850_44995028_44995145_44999717
transcript_178823.known	chr7	-	4836	8	FSM	ENSG00000136274.9	ENST00000490531.3	4836	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_7	3.80654645556407	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCCTCTGGTGTCTCCTC	-45088634	True	NA	-6	True	AATAAA	-15	NA	45088969	45080436	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_45080524_45080639_45080763_45080875_45081023_45081116_45081264_45081600_45081673_45081754_45081868_45082107_45086113_45088827
transcript_17883.nic	chr1	+	3220	10	NIC	ENSG00000116747.13	novel	1898	10	NA	NA	-775	0	intron_retention	FALSE	canonical	1	6	junction_1	30.8572979942537	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAGGAAA	193058661	False	NA	16	True	AATGAA	-44	NA	193058678	193084866	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_193059777_193059873_193060223_193069033_193069635_193075819_193076041_193076500_193076648_193076912_193077051_193081363_193081481_193082185_193082300_193082561_193082709_193084578
transcript_178844.known	chr7	-	2190	11	FSM	ENSG00000136270.14	ENST00000494076.5	2190	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_10	240.357150923371	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACTTGTCTGTCTGCTTT	-45098353	True	NA	-4	True	NA	NA	NA	45111706	45100100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_45100427_45101257_45101373_45101502_45101615_45101824_45102071_45102346_45102492_45103332_45103444_45104098_45104257_45104537_45104710_45105440_45105765_45108826_45109244_45111642
transcript_178847.known	chr7	-	2226	11	FSM	ENSG00000136270.14	ENST00000258770.8	2226	11	0	0	0	0	multi-exon	FALSE	canonical	3	558	junction_10	93.6515349580561	1922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTCTGTCTGCTTTG	-45098344	True	NA	-3	True	NA	NA	NA	45111697	45100099	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_45100427_45101257_45101373_45101502_45101615_45101824_45102071_45102346_45102492_45103332_45103444_45104098_45104257_45104537_45104710_45105440_45105765_45108826_45109288_45111642
transcript_178848.nic	chr7	-	2564	11	NIC	ENSG00000136270.14	novel	2226	11	NA	NA	-10	0	intron_retention	FALSE	canonical	3	139	junction_10	204.18481824073	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACTTGTCTGTCTGCTTT	NA	False	NA	-4	True	NA	NA	NA	45112057	45100100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_45100427_45101257_45101373_45101502_45101615_45101824_45102071_45102346_45102492_45103332_45103444_45104098_45104257_45104537_45104710_45105440_45105765_45108826_45109288_45111663
transcript_17889.known	chr1	+	8291	9	FSM	ENSG00000116747.13	ENST00000400968.7	8291	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	11.8189466535728	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATTCCAAGAAGTGAATAT	193052198	True	NA	NA	False	NA	NA	NA	193059611	193091219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_193059777_193069033_193069635_193075819_193076041_193076500_193076648_193076912_193077051_193081363_193081481_193082185_193082300_193082561_193082709_193084578
transcript_17890.known	chr1	+	3081	9	FSM	ENSG00000116747.13	ENST00000367446.7	3081	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	25.3448096264304	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTTTGCTCATAATTTT	193060013	False	NA	10	True	ATTAAA	-20	NA	193060033	193085985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_193060223_193069033_193069635_193075819_193076041_193076500_193076648_193076912_193077051_193081363_193081481_193082185_193082300_193082561_193082709_193084578
transcript_178922.known	chr7	-	1917	9	FSM	ENSG00000136270.14	ENST00000361278.7	1917	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_6	258.020832492262	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTCTGTCTGCTTTG	-45098365	True	NA	-3	True	NA	NA	NA	45111718	45100099	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_45100427_45101257_45101373_45101502_45101615_45101824_45102071_45102346_45102492_45103332_45103444_45105440_45105765_45108826_45109288_45111642
transcript_178923.known	chr7	-	2225	9	FSM	ENSG00000136270.14	ENST00000395655.8	2225	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_6	315.766502933734	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTCTGTCTGCTTTG	NA	False	NA	-3	True	NA	NA	NA	45112047	45100099	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_45100427_45101257_45101373_45101502_45101615_45101824_45102071_45102346_45102492_45103332_45103444_45105440_45105765_45108826_45109288_45111663
transcript_17896.known	chr1	+	7848	8	FSM	ENSG00000116747.13	ENST00000432079.5	7848	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	27.452370627347	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATTCCAAGAAGTGAATAT	193059290	True	NA	NA	False	NA	NA	NA	193059453	193091219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_193059777_193075819_193076041_193076500_193076648_193076912_193077051_193081363_193081481_193082185_193082300_193082561_193082709_193084578
transcript_178975.known	chr7	+	1323	3	FSM	ENSG00000122679.8	ENST00000242249.8	1323	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	3.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGTTTTGTTTCATGT	45157655	True	NA	4	True	AGTAAA	-19	NA	45157790	45184250	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_45157887_45177308_45177442_45183156
transcript_178976.known	chr7	+	12657	20	FSM	ENSG00000164742.16	ENST00000297323.12	12657	20	0	0	0	0	multi-exon	TRUE	canonical	2	21	junction_16	8.78584860637104	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGGCCATTTCAGTTG	45573872	True	NA	NA	False	AATAAA	-23	NA	45574367	45723116	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_45575183_45592758_45592909_45610378_45610498_45622631_45622744_45648669_45648798_45657726_45657886_45660041_45660184_45662058_45662215_45677868_45678064_45678165_45678264_45679708_45679794_45684978_45685069_45685961_45686216_45686546_45686674_45703375_45703493_45703599_45703747_45704517_45704617_45708349_45708465_45710527_45710653_45713692
transcript_17898.nic	chr1	-	749	7	ISM	ENSG00000116750.14	ENST00000367449.5	1507	11	19	9690	19	-5127	5prime_fragment	FALSE	canonical	3	433	junction_2	26.4622372447985	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATACAAAAGTAAATGCTC	-193050768	True	NA	NA	False	NA	NA	NA	193059390	193028094	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
transcript_178987.nic	chr7	-	887	6	ISM	ENSG00000214765.9	ENST00000686398.1	1600	10	0	20039	0	9340	5prime_fragment	FALSE	canonical	3	123	junction_1	20.0539272961682	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTGTTAAAAAGATAAAGGT	-45766796	True	NA	NA	False	AATATA	-38	NA	45769037	45748643	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_45748715_45751528_45751647_45756908_45756993_45758042_45758178_45759073_45759175_45768659
transcript_178988.nic	chr7	-	816	5	ISM	ENSG00000214765.9	ENST00000686398.1	1600	10	0	22924	0	6455	5prime_fragment	FALSE	canonical	3	152	junction_4	12.0701077045733	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCAGGATGTGTTAACT	-45766796	True	NA	NA	False	TTTAAA	-7	NA	45769037	45751528	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_45751647_45756908_45756993_45758042_45758178_45759073_45759175_45768659
transcript_178990.known	chr7	-	2613	5	FSM	ENSG00000146674.16	ENST00000613132.5	2613	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	1.11803398874989	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAGCTGTAGTGGAAAAC	-45921055	True	NA	NA	False	AATAAA	-20	NA	45921272	45912244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_45913835_45914804_45914946_45916547_45916668_45917212_45917440_45920737
transcript_178991.known	chr7	-	7585	31	FSM	ENSG00000136205.17	ENST00000311160.14	7585	31	0	0	0	0	multi-exon	TRUE	canonical	3	42	junction_15	12.1493026777489	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCCGTGAGACGGTATTT	-47580903	True	NA	-9	True	AATAAA	-17	NA	47582111	47275153	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_47278221_47280163_47280191_47280285_47280355_47283696_47283866_47291954_47292033_47292827_47292906_47293732_47293829_47297081_47297214_47302185_47302273_47302949_47303585_47304831_47305004_47344754_47344839_47344923_47345039_47346186_47346357_47368364_47369622_47396799_47396905_47400392_47400459_47400784_47400915_47411726_47411803_47413936_47413998_47415093_47415207_47424100_47424185_47428311_47428377_47435281_47435405_47437262_47437314_47439486_47439659_47442002_47442056_47481102_47481142_47506906_47506945_47529035_47529148_47582050
transcript_179004.known	chr7	-	1304	9	FSM	ENSG00000136273.13	ENST00000458191.5	1304	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	40.0731752547761	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCGCATTGACCTCCTTGG	-47976352	True	NA	NA	False	NA	NA	NA	47979553	47964319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_47964633_47965299_47965439_47967805_47967926_47969218_47969319_47975612_47975688_47976729_47976838_47978416_47978594_47978688_47978817_47979409
transcript_179005.nic	chr7	-	2343	9	NIC	ENSG00000136273.13	novel	1304	9	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	26.4761095140506	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTGGTGTCTGTTTCTG	-47976417	True	NA	-1	True	AAGAAA	-18	NA	47979618	47963287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_47964633_47965299_47965439_47967805_47967926_47969218_47969319_47975612_47975688_47976729_47976838_47978416_47978594_47978688_47978817_47979467
transcript_179007.nic	chr7	-	2335	9	NIC	ENSG00000136273.13	novel	1304	9	NA	NA	-58	-63	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	26.4761095140506	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGGCTTAAGATTTTAT	-47976472	True	NA	-64	True	AATACA	-21	NA	47979673	47963350	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_47964633_47965299_47965439_47967805_47967926_47969218_47969319_47975612_47975688_47976729_47976838_47978416_47978594_47978688_47978817_47979467
transcript_17901.known	chr1	-	682	4	FSM	ENSG00000023572.10	ENST00000367439.8	682	4	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_3	10.7082522694727	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCCCACTTGCCAATTC	-193103494	True	NA	-25	True	AATAAA	-17	NA	193105414	193096469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_193096760_193097583_193097761_193101140_193101205_193105263
transcript_179010.known	chr7	-	1125	8	FSM	ENSG00000136273.13	ENST00000432325.5	1125	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	36.8969884286244	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTCATGTCTGTTTTGCT	-47976352	True	NA	25	True	GATAAA	-15	NA	47979553	47965165	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_47965439_47967805_47967926_47969218_47969319_47975612_47975688_47976729_47976838_47978416_47978594_47978688_47978817_47979409
transcript_179011.known	chr7	-	3007	8	FSM	ENSG00000136273.13	ENST00000258774.10	3007	8	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_7	12.0576844834338	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTGGTGTCTGTTTCTG	-47976414	True	NA	-1	True	AAGAAA	-18	NA	47979615	47963287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_47965439_47967805_47967926_47969218_47969319_47975612_47975688_47976729_47976838_47978416_47978594_47978688_47978817_47979467
transcript_179015.known	chr7	-	548	3	FSM	ENSG00000136273.13	ENST00000468868.1	548	3	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	19	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTCCTCATTTTAAAATT	-47976352	True	NA	45	True	TTTAAA	-43	NA	47979553	47978259	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_47978594_47978688_47978817_47979467
transcript_179016.known	chr7	+	2102	9	FSM	ENSG00000164746.14	ENST00000348904.4	2102	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	2.48746859276655	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAAGTTTGTTTTTTCC	48035484	True	NA	NA	False	AATAAA	-18	NA	48035542	48061297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_48035631_48036207_48036364_48041333_48041520_48043480_48043590_48046459_48046617_48049879_48049978_48052699_48052924_48054594_48054607_48060225
transcript_179019.nic	chr7	+	1329	9	NIC	ENSG00000183696.14	novel	918	7	NA	NA	125	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_1	81.8458917722814	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTTGTGTGGACTTT	48089485	False	NA	9	True	ATTAAA	-15	NA	48089500	48108419	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_48089637_48090187_48090365_48094762_48094828_48099669_48099788_48101823_48101983_48103296_48103412_48106872_48107083_48107360_48107508_48108217
transcript_17902.nic	chr1	+	844	3	ISM	ENSG00000116747.13	ENST00000400968.7	8291	9	-10	15332	7	-3	5prime_fragment	FALSE	canonical	3	58	junction_2	1	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTCTCTGTGGAGACTGA	193052188	True	NA	NA	False	TATAAA	-7	NA	193059601	193075887	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_193059777_193069033_193069635_193075819
transcript_179024.nic	chr7	+	937	6	NIC	ENSG00000183696.14	novel	918	7	NA	NA	125	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_1	76.9285382676676	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTTGTGTGGACTTT	48089485	False	NA	9	True	ATTAAA	-15	NA	48089500	48108419	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_48089637_48090187_48090365_48094762_48094828_48106872_48107083_48107360_48107508_48108217
transcript_179027.known	chr7	+	955	6	FSM	ENSG00000183696.14	ENST00000395560.7	955	6	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_3	49.366385324429	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTTGTGTGGACTTT	48086272	True	NA	9	True	ATTAAA	-15	NA	48089264	48108419	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_48089419_48090187_48090365_48094762_48094828_48106872_48107083_48107360_48107508_48108217
transcript_179028.known	chr7	+	11322	4	FSM	ENSG00000188730.5	ENST00000340652.5	11322	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	7.11805216802087	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGCACTTCCAGGTAGA	49773445	True	NA	NA	False	AATAAA	-17	NA	49773637	49921950	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_49774114_49775332_49776132_49802710_49802841_49912033
transcript_17903.known	chr1	+	592	2	FSM	ENSG00000116747.13	ENST00000469214.2	592	2	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAACAAATGTCGTGTA	193052181	True	NA	NA	False	NA	NA	NA	193059594	193060283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_193059777_193059873
transcript_179030.nic	chr7	+	3152	3	NIC	ENSG00000188730.5	novel	11322	4	NA	NA	-19	-9408	intron_retention	FALSE	canonical	3	21	junction_1	1	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACCGTGTACCTGCATAT	49773426	True	NA	NA	False	ATTAAA	-22	NA	49773618	49912542	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_49776132_49802710_49802841_49912033
transcript_179031.known	chr7	-	3930	4	FSM	ENSG00000132436.12	ENST00000433017.6	3930	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	9.41629792788369	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGGCTTGCATTCTAA	-50449510	True	NA	-6	True	ATTAAA	-19	NA	50450350	50444132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_50447298_50448180_50448290_50449117_50449724_50450300
transcript_179032.known	chr7	-	3485	4	FSM	ENSG00000132436.12	ENST00000395556.6	3485	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	6.59966329107444	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGGCTTGCATTCTAA	-50449510	True	NA	-6	True	ATTAAA	-19	NA	50450350	50444132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_50447298_50448180_50448290_50449562_50449724_50450300
transcript_179034.known	chr7	-	3368	3	FSM	ENSG00000132436.12	ENST00000615084.4	3368	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	7	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTTGCATTCTAAATTG	-50449550	True	NA	-2	True	ATTAAA	-23	NA	50450390	50444128	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_50447298_50448180_50448290_50450300
transcript_17904.known	chr1	+	1791	8	FSM	ENSG00000116747.13	ENST00000367441.1	1791	8	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	11.141025490483	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAGGAAA	193068898	False	NA	16	True	AATGAA	-44	NA	193069015	193084866	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_193069635_193075819_193076041_193076500_193076648_193076912_193077051_193081363_193081481_193082185_193082300_193082561_193082709_193084578
transcript_17905.known	chr1	+	377	3	FSM	ENSG00000116747.13	ENST00000415442.2	377	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	29	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTCTGTGGAGACTGAAAA	193052205	True	NA	NA	False	TATAAA	-10	NA	193059618	193075890	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_193059777_193069033_193069182_193075819
transcript_179068.known	chr7	-	5468	19	FSM	ENSG00000106070.20	ENST00000401949.6	5468	19	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_18	189.68115709797	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTATTGCTGGTGATAT	-50781597	True	NA	-16	True	AATAAA	-21	NA	50782896	50590067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50732271_50732369_50755886_50756057_50780626_50780737_50782423
transcript_17908.known	chr1	+	5869	17	FSM	ENSG00000134371.14	ENST00000367435.5	5869	17	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_8	27.633482860472	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGTTCATGCTATGTCG	193115884	True	NA	27	True	AATAAA	-28	NA	193122030	193254815	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_193122332_193125111_193125218_193130173_193130244_193135390_193135454_193135536_193135590_193138084_193138174_193141849_193142067_193147866_193147966_193150303_193150383_193152379_193152445_193203794_193203853_193212064_193212101_193212389_193212478_193232992_193233155_193236255_193236357_193249729_193249872_193250675
transcript_179085.known	chr7	-	2299	18	FSM	ENSG00000106070.20	ENST00000407526.6	2299	18	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_16	186.727898179349	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGGGTCGCCTCCCTCTG	-50781146	False	NA	NA	False	NA	NA	NA	50782445	50592762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50705139_50705324_50755886_50756057_50782423
transcript_179088.known	chr7	-	2156	18	FSM	ENSG00000106070.20	ENST00000645075.2	2156	18	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_16	177.467731849345	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCAGATGTCCTCTCGGCT	-50784000	True	NA	NA	False	NA	NA	NA	50793432	50592951	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50710874_50710991_50732271_50732369_50793223
transcript_179090.known	chr7	-	5431	18	FSM	ENSG00000106070.20	ENST00000644769.1	5431	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	182.395782443803	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTATTGCTGGTGATA	-50792952	False	NA	-17	True	AATAAA	-20	NA	50792969	50590068	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50710874_50710991_50755886_50756057_50792441
transcript_179096.nic	chr7	-	2664	18	NIC	ENSG00000106070.20	novel	5468	19	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	3	104	junction_16	151.231713413121	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTGTATTGATCACT	-50793497	False	NA	-17	True	ATTAAA	-14	NA	50793514	50592579	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50732271_50732369_50755886_50756057_50793223
transcript_179110.known	chr7	-	5032	17	FSM	ENSG00000106070.20	ENST00000335866.7	5032	17	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_16	131.475030305188	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCTGGTGATATCTGTT	-50784030	True	NA	-11	True	AATAAA	-26	NA	50793462	50590062	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50755886_50756057_50793223
transcript_179119.nic	chr7	-	2460	17	NIC	ENSG00000106070.20	novel	2156	18	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_16	146.372811683044	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTGTATTGATCACT	-50784048	True	NA	-17	True	ATTAAA	-14	NA	50793480	50592579	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50732271_50732369_50793223
transcript_179137.known	chr7	-	2319	16	FSM	ENSG00000106070.20	ENST00000402497.6	2319	16	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_15	101.76172605105	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTGTATTGATCACT	-50784004	True	NA	-17	True	ATTAAA	-14	NA	50793436	50592579	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50793223
transcript_179146.nnic	chr7	-	2612	16	NIC	ENSG00000106070.20	novel	2319	16	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	2	43	junction_15	126.869942154248	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTGTATTGATCACT	-50781630	True	NA	-17	True	ATTAAA	-14	NA	50782929	50592579	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_50593099_50595436_50595531_50603997_50604086_50604310_50604378_50605289_50605407_50606336_50606415_50612740_50612840_50614769_50614881_50616209_50616348_50618070_50618140_50619169_50619286_50626821_50626979_50669721_50669864_50674435_50674659_50703820_50703909_50782423
transcript_17919.nic	chr1	+	1627	14	ISM	ENSG00000134371.14	ENST00000649895.1	2364	16	-207	4653	-207	-4653	5prime_fragment	FALSE	canonical	3	338	junction_8	25.4665344854424	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAACTCTAATACAAAGAA	NA	False	NA	NA	False	AAGAAA	-21	NA	193121775	193233040	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_193122332_193125111_193125218_193130173_193130244_193135390_193135454_193135536_193135590_193138084_193138174_193141849_193142067_193147866_193147966_193150303_193150383_193152379_193152445_193203794_193203853_193212064_193212101_193212389_193212478_193232992
transcript_17920.nic	chr1	+	1358	13	ISM	ENSG00000134371.14	ENST00000649895.1	2364	16	14	25216	0	-25216	5prime_fragment	FALSE	canonical	3	338	junction_8	24.9681741867967	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTAATTTATTAAACTA	193115850	True	NA	NA	False	NA	NA	NA	193121996	193212477	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_193122332_193125111_193125218_193130173_193130244_193135390_193135454_193135536_193135590_193138084_193138174_193141849_193142067_193147866_193147966_193150303_193150383_193152379_193152445_193203794_193203853_193212064_193212101_193212389
transcript_179214.known	chr7	-	5339	14	FSM	ENSG00000106078.19	ENST00000395542.6	5339	14	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	9.78103466169374	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTTGTGTGAATTTCAT	-51314237	True	NA	-2	True	AATAAA	-16	NA	51316818	51016212	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_51017569_51025108_51025232_51026545_51026666_51027711_51029592_51030811_51030910_51043382_51043693_51083057_51083229_51085165_51085305_51136157_51136332_51184101_51184200_51190849_51191079_51193378_51193590_51219740_51219945_51316592
transcript_179216.nic	chr7	-	5595	14	NIC	ENSG00000106078.19	novel	5339	14	NA	NA	-115	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	11.8346597584228	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTTGTGTGAATTTCAT	-51316918	False	NA	-2	True	AATAAA	-16	NA	51316933	51016212	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_51017569_51025108_51025373_51026545_51026666_51027711_51029592_51030811_51030910_51043382_51043693_51083057_51083229_51085165_51085305_51136157_51136332_51184101_51184200_51190849_51191079_51193378_51193590_51219740_51219945_51316592
transcript_179228.known	chr7	-	2332	8	FSM	ENSG00000106078.19	ENST00000395540.6	2332	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	17.767202069762	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGAGACTCTGCTTTCA	-51314237	True	NA	NA	False	NA	NA	NA	51316818	51064398	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_51065450_51085165_51085305_51136157_51136332_51184101_51184200_51190849_51191079_51193378_51193590_51219740_51219945_51316592
transcript_179233.nic	chr7	-	2458	6	ISM	ENSG00000106078.19	ENST00000648294.1	1401	8	-166	51899	-115	-51899	5prime_fragment	FALSE	canonical	3	40	junction_3	6.18384993349612	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATGTATACATATATCCT	-51316918	False	NA	NA	False	AATAAA	-15	NA	51316933	51134956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_51136332_51184101_51184200_51190849_51191079_51193378_51193590_51219740_51219945_51316592
transcript_179235.nic	chr7	-	1041	5	ISM	ENSG00000106078.19	ENST00000648294.1	1401	8	-166	101086	-115	6854	5prime_fragment	FALSE	canonical	3	40	junction_2	6.21992765231236	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGGGATTTTTCAAAGT	-51316918	False	NA	NA	False	GATAAA	-13	NA	51316933	51184143	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_51184200_51190849_51191079_51193378_51193590_51219740_51219945_51316592
transcript_179236.nic	chr7	-	2836	2	ISM	ENSG00000106078.19	ENST00000648294.1	1401	8	-45	134271	-3	-26331	5prime_fragment	FALSE	canonical	3	56	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGCATTGTGGATCAT	-51314231	True	NA	NA	False	AAAAAG	-12	NA	51316812	51217328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_51219945_51316592
transcript_179238.known	chr7	-	512	4	FSM	ENSG00000132432.14	ENST00000450622.1	512	4	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_3	2267.13784318466	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGAATATCTCTTTTTT	-54739443	True	NA	26	True	ATTAAA	-13	NA	54759182	54752256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_54752421_54755778_54755882_54757494_54757595_54759037
transcript_179239.known	chr7	-	425	4	FSM	ENSG00000132432.14	ENST00000352861.9	425	4	0	0	0	0	multi-exon	FALSE	canonical	3	3127	junction_3	868.454949896654	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATATCTCTTTTTTCTGT	-54739472	True	NA	30	True	ATTAAA	-17	NA	54759211	54752252	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_54752421_54755778_54755882_54757494_54757595_54759157
transcript_17924.nic	chr1	+	1110	9	ISM	ENSG00000134371.14	ENST00000647662.1	1092	11	-303	2805	0	0	5prime_fragment	FALSE	canonical	3	338	junction_8	26.6176633084123	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAAGTTGCTTAATTCTTA	193115850	True	NA	41	True	NA	NA	NA	193121996	193150381	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_193122332_193125111_193125218_193130173_193130244_193135390_193135454_193135536_193135590_193138084_193138174_193141849_193142067_193147866_193147966_193150303
transcript_179242.known	chr7	+	9905	28	FSM	ENSG00000146648.20	ENST00000275493.7	9905	28	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_12	2.87078850001127	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCATGTTGGTACTAGTTA	55018495	True	NA	7	True	NA	NA	NA	55019016	55211628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_55019366_55142285_55142438_55143304_55143489_55146605_55146741_55151293_55151363_55152545_55152665_55154010_55154153_55155829_55155947_55156532_55156660_55156758_55156833_55157662_55157754_55160138_55160339_55161498_55161632_55163732_55163824_55165279_55165438_55171174_55171214_55172982_55173125_55173920_55174044_55174721_55174821_55181292_55181479_55191718_55191875_55192765_55192842_55198716_55198864_55200315_55200414_55201187_55201356_55201734_55201783_55202516_55202626_55205255
transcript_179245.known	chr7	+	4459	9	FSM	ENSG00000132434.10	ENST00000254770.3	4459	9	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_5	11.7340317027013	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAATCGTCATTCGTTTTC	55365278	True	NA	9	True	AGTAAA	-25	NA	55365336	55433737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_55366230_55391792_55391911_55398422_55398631_55399956_55400105_55401173_55401321_55411906_55412090_55425253_55425431_55428374_55428448_55431225
transcript_179257.known	chr7	-	2939	5	FSM	ENSG00000154978.13	ENST00000285279.10	2939	5	0	0	0	0	multi-exon	FALSE	canonical	3	456	junction_1	38.1215162342738	791	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTTTGATTGTTTTGTT	-55568092	True	NA	-9	True	AATAAA	-15	NA	55572502	55470612	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_55473046_55492281_55492419_55497612_55497691_55521071_55521131_55572270
transcript_179270.known	chr7	+	1993	10	FSM	ENSG00000146729.10	ENST00000322090.8	1993	10	0	0	0	0	multi-exon	FALSE	canonical	3	680	junction_6	50.1907472659166	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCACGTTTGGATTTTCTT	55960833	True	NA	18	True	AATAAA	-19	NA	55964584	56000179	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_55964702_55978125_55978266_55978349_55978396_55981472_55981568_55982209_55982281_55983727_55983869_55984846_55984879_55994893_55994989_55997365_55997450_55999007
transcript_179283.known	chr7	+	1882	8	FSM	ENSG00000146729.10	ENST00000446778.5	1882	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	344.07509858952	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGTTTGGATTTTCTTTT	55960829	True	NA	20	True	AATAAA	-21	NA	55964580	56000181	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_55964702_55978125_55978266_55981472_55981568_55983727_55983869_55984846_55984879_55994893_55994989_55997365_55997450_55999007
transcript_179295.known	chr7	+	1786	3	FSM	ENSG00000239789.6	ENST00000285298.9	1786	3	0	0	0	0	multi-exon	FALSE	canonical	3	437	junction_1	182	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTTTTCTTACATCCT	55936988	True	NA	14	True	AATAAA	-15	NA	55951876	55956500	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_55951931_55953178_55953319_55954908
transcript_179298.known	chr7	+	718	3	FSM	ENSG00000239789.6	ENST00000443449.1	718	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	392	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGAAGCGGGAGTGGAAG	55937074	False	NA	-71	True	NA	NA	NA	55951962	55955172	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_55952277_55953178_55953319_55954908
transcript_179328.known	chr7	-	1974	8	FSM	ENSG00000146733.14	ENST00000275605.8	1974	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	96.8459749145149	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGATTTGTGGAATTTTCAG	-56049656	True	NA	-20	True	AATAAA	-21	NA	56051444	56011063	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_56011870_56015022_56015172_56017233_56017380_56019599_56019735_56021072_56021232_56031928_56032055_56033960_56034107_56051137
transcript_179335.nic	chr7	-	2449	7	ISM	ENSG00000146733.14	ENST00000275605.8	1974	8	17212	-656	-60	643	3prime_fragment	FALSE	canonical	3	259	junction_6	19.6504170156485	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAGCATTTTCCCCTAAA	-56031102	True	NA	3	True	AATAAA	-23	NA	56034232	56010407	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_56011870_56015022_56015172_56017233_56017380_56019599_56019735_56021072_56021232_56031928_56032055_56033960
transcript_179337.nic	chr7	-	2392	7	ISM	ENSG00000146733.14	ENST00000275605.8	1974	8	17212	-599	-60	586	3prime_fragment	FALSE	canonical	3	259	junction_6	19.6504170156485	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATATTCGAAAATCACATAA	-56031102	True	NA	-54	True	NA	NA	NA	56034232	56010464	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_56011870_56015022_56015172_56017233_56017380_56019599_56019735_56021072_56021232_56031928_56032055_56033960
transcript_179339.nic	chr7	-	1789	7	ISM	ENSG00000146733.14	ENST00000275605.8	1974	8	17212	4	-60	0	3prime_fragment	FALSE	canonical	3	259	junction_6	19.6504170156485	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACGGATTTGTGGAATTT	-56031102	True	NA	-24	True	AATAAA	-17	NA	56034232	56011067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_56011870_56015022_56015172_56017233_56017380_56019599_56019735_56021072_56021232_56031928_56032055_56033960
transcript_179340.nic	chr7	-	1719	7	ISM	ENSG00000146733.14	ENST00000275605.8	1974	8	17212	74	-60	-70	3prime_fragment	FALSE	canonical	3	259	junction_6	19.6504170156485	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGATTCGGCAGCCTTCA	-56031102	True	NA	-5	True	ATTAAA	-19	NA	56034232	56011137	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_56011870_56015022_56015172_56017233_56017380_56019599_56019735_56021072_56021232_56031928_56032055_56033960
transcript_179347.known	chr7	-	2178	8	FSM	ENSG00000146733.14	ENST00000395471.7	2178	8	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_7	73.9495139419111	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACGGATTTGTGGAATTT	NA	False	NA	-24	True	AATAAA	-17	NA	56051604	56011067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_56011870_56015022_56015172_56017233_56017380_56019599_56019735_56021072_56021232_56031928_56032055_56033960_56034155_56051137
transcript_17935.known	chr1	-	6132	27	FSM	ENSG00000066279.19	ENST00000294732.11	6132	27	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_10	62.826943679213	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATATTATTCCTGTCTAT	-197142128	True	NA	NA	False	AATAAA	-19	NA	197146694	197084127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_197084427_197086802_197086973_197088255_197088433_197089929_197090085_197090195_197090389_197090849_197091042_197091906_197092057_197093051_197093262_197094083_197094181_197095997_197096165_197117788_197117984_197121914_197122044_197122158_197122302_197122387_197122596_197124109_197124332_197124869_197124956_197125045_197125192_197128489_197128666_197129186_197129318_197129914_197130057_197132284_197132353_197133349_197133596_197135095_197135243_197139766_197139872_197142330_197143811_197143956_197144101_197146140
transcript_179350.known	chr7	+	2584	14	FSM	ENSG00000146731.11	ENST00000275603.9	2584	14	0	0	0	0	multi-exon	FALSE	canonical	3	2441	junction_3	270.128875663924	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTTCTTGCAATGGT	56017721	True	NA	28	True	AATAAA	-18	NA	56051764	56063989	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_56051986_56052421_56052486_56054368_56054504_56055623_56055798_56056310_56056415_56057992_56058104_56058361_56058522_56058619_56058703_56059543_56059641_56060268_56060417_56060806_56060941_56061746_56061850_56062682_56062756_56063012
transcript_179356.known	chr7	+	2529	13	FSM	ENSG00000146731.11	ENST00000335503.3	2529	13	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	819.191861260569	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTTCTTGCAATGGT	56017641	True	NA	28	True	AATAAA	-18	NA	56051684	56063989	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_56051986_56052421_56052486_56055623_56055798_56056310_56056415_56057992_56058104_56058361_56058522_56058619_56058703_56059543_56059641_56060268_56060417_56060806_56060941_56061746_56061850_56062682_56062756_56063012
transcript_179361.nic	chr7	+	920	7	ISM	ENSG00000146731.11	ENST00000275603.9	2584	14	-77	5594	3	-615	5prime_fragment	FALSE	canonical	3	2441	junction_3	167.598727123249	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGAGAGAAAAACTCGT	56017644	True	NA	-14	True	AATAGA	-34	NA	56051687	56058395	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_56051986_56052421_56052486_56054368_56054504_56055623_56055798_56056310_56056415_56057992_56058104_56058361
transcript_179362.nic	chr7	+	907	7	ISM	ENSG00000146731.11	ENST00000275603.9	2584	14	-3	5533	-3	-554	5prime_fragment	FALSE	canonical	3	2441	junction_3	167.598727123249	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATAGAACTGAAAAGGAAA	56017718	True	NA	47	True	AAGAAA	-27	NA	56051761	56058456	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_56051986_56052421_56052486_56054368_56054504_56055623_56055798_56056310_56056415_56057992_56058104_56058361
transcript_179365.known	chr7	+	1171	10	FSM	ENSG00000129103.19	ENST00000413756.5	1171	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	189.146621551759	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATCCCTCTGTGGCAGG	56056281	True	NA	NA	False	NA	NA	NA	56064288	56079736	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_56064379_56068481_56068639_56072996_56073112_56074173_56074219_56074585_56074737_56076833_56076890_56078101_56078187_56078363_56078509_56078921_56079040_56079527
transcript_179370.known	chr7	+	1990	9	FSM	ENSG00000129103.19	ENST00000434526.8	1990	9	0	0	0	0	multi-exon	FALSE	canonical	3	393	junction_5	35.5940655165998	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTTGTGTCTTTGATCC	56056278	True	NA	29	True	AATAAA	-24	NA	56064285	56080670	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_56064379_56068481_56068639_56072996_56073112_56074173_56074219_56074585_56074737_56076833_56076890_56078101_56078187_56078363_56078509_56079527
transcript_179371.known	chr7	+	1876	8	FSM	ENSG00000129103.19	ENST00000342190.11	1876	8	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_7	163.345383423329	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTTGTGTCTTTGATCC	56056247	True	NA	29	True	AATAAA	-24	NA	56064254	56080670	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_56064379_56068481_56068639_56072996_56073112_56074173_56074219_56074585_56074737_56076833_56076890_56078101_56078187_56079527
transcript_179373.known	chr7	+	1792	8	FSM	ENSG00000129103.19	ENST00000423763.5	1792	8	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	153.064745537732	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAATAAAATCTCCTGCAA	56056293	True	NA	-3	True	NA	NA	NA	56064300	56080638	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_56064379_56068481_56068639_56072996_56073112_56074173_56074219_56076833_56076890_56078101_56078187_56078363_56078509_56079527
transcript_179375.known	chr7	+	2006	8	FSM	ENSG00000129103.19	ENST00000651586.1	2006	8	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	148.268096944112	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATTTGTGTCTTTGATC	56056216	True	NA	28	True	AATAAA	-23	NA	56064223	56080669	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_56064379_56068481_56068639_56072996_56073112_56074585_56074737_56076833_56076890_56078101_56078187_56078363_56078509_56079527
transcript_179379.known	chr7	+	947	7	FSM	ENSG00000129103.19	ENST00000437307.6	947	7	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_4	179.403641731896	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGCCAGGTGTTTCTGTT	56056276	True	NA	NA	False	NA	NA	NA	56064283	56079832	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_56064379_56068481_56068639_56072996_56073112_56074173_56074219_56078101_56078187_56078363_56078509_56079527
transcript_179380.known	chr7	+	1771	7	FSM	ENSG00000129103.19	ENST00000438133.5	1771	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	165.689133285466	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATTTGTGTCTTTGATC	56056300	True	NA	28	True	AATAAA	-23	NA	56064307	56080669	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_56064379_56068481_56068639_56072996_56073112_56076833_56076890_56078101_56078187_56078363_56078509_56079527
transcript_179384.known	chr7	+	1287	6	FSM	ENSG00000129103.19	ENST00000395435.7	1287	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	186.685189557179	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGCATTGCATTGTGGG	56056246	True	NA	NA	False	NA	NA	NA	56064253	56080187	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_56064379_56068481_56068639_56072996_56073112_56078101_56078187_56078363_56078509_56079527
transcript_179388.known	chr7	+	1195	3	FSM	ENSG00000129103.19	ENST00000483327.5	1195	3	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_2	15.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTCTGATGGTGCCAC	56056293	True	NA	NA	False	NA	NA	NA	56064300	56073956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_56064379_56068481_56068639_56072996
transcript_179390.known	chr7	-	2993	4	FSM	ENSG00000173041.12	ENST00000309683.11	2993	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	1.69967317119759	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTATTGTGCATTCAATGA	-64561003	True	NA	-1	True	ATTAAA	-20	NA	64563071	64519877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_64522501_64543706_64543803_64544305_64544433_64562924
transcript_179391.nnic	chr7	+	656	3	FSM	ENSG00000286456.2	ENST00000686440.1	636	3	-30	10	-30	-10	multi-exon	FALSE	canonical	3	14	junction_2	32	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACCCAGCACCAAGGCTAT	64572317	True	NA	8	True	AATAAA	-19	NA	64574642	64614824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_64574849_64599658_64599783_64614498
transcript_179393.known	chr7	+	5174	5	FSM	ENSG00000196247.13	ENST00000344930.7	5174	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	24.2834820402676	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGATTATGCGTGAAC	64662318	True	NA	12	True	AATAAA	-19	NA	64666197	64711026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_64666286_64679176_64679337_64691247_64691375_64691864_64691961_64706323
transcript_179396.known	chr7	+	842	5	FSM	ENSG00000197008.10	ENST00000494380.5	842	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	24.8130510014387	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCATACTAGAGAGAATTT	64790097	True	NA	55	True	CATAAA	-4	NA	64794424	64831803	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_64794572_64814917_64815045_64815575_64815654_64830939_64831077_64831450
transcript_179398.known	chr7	+	2308	2	FSM	ENSG00000197008.10	ENST00000430838.2	2308	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCATAAGGTTTTGTTT	64790162	True	NA	15	True	AATAAA	-29	NA	64794489	64833676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_64794572_64831450
transcript_179399.known	chr7	+	2579	4	FSM	ENSG00000197008.10	ENST00000307355.12	2579	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	20.9920619917784	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATAAGGTTTTGTTTTAGT	64790100	True	NA	19	True	AATAAA	-33	NA	64794427	64833680	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_64794572_64814917_64815045_64815575_64815654_64831450
transcript_179401.known	chr7	+	3757	5	FSM	ENSG00000198039.12	ENST00000395375.3	3757	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	20.9821352583573	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGAGTCCTGAATATTT	64900531	True	NA	14	True	AATAAA	-31	NA	64903287	64930966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_64903420_64917029_64917119_64917580_64917708_64918196_64918293_64927653
transcript_179404.known	chr7	+	2000	4	FSM	ENSG00000198039.12	ENST00000476120.2	3698	4	-26	1724	-6	133	multi-exon	FALSE	canonical	3	46	junction_1	19.2006944318862	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGTCAAAAGATCTTTC	64900490	True	NA	NA	False	AATAAA	-17	NA	64903246	64929257	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_64903420_64917580_64917708_64918196_64918293_64927653
transcript_179405.known	chr7	+	752	3	FSM	ENSG00000286342.2	ENST00000653683.2	933	3	98	83	28	-36	multi-exon	FALSE	canonical	3	7	junction_2	0.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATATGTGGGTAAATC	64947812	False	NA	-78	True	NA	NA	NA	64947837	64950641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_64947858_64949115_64949410_64950203
transcript_179406.known	chr7	-	3206	2	FSM	ENSG00000213462.5	ENST00000394323.3	3206	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCTCTCCGGCCTCCTG	-65004002	True	NA	-3	True	AATAAA	-19	NA	65006687	64990355	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_64993415_65006540
transcript_179407.known	chr7	-	1729	2	FSM	ENSG00000213462.5	ENST00000528878.1	1729	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACCGTAAAATTTCCTT	-65004058	True	NA	NA	False	AATAAA	-34	NA	65006743	65003668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_65005195_65006540
transcript_179408.known	chr7	-	358	2	FSM	ENSG00000213462.5	ENST00000535538.1	358	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAGAGCACCAAGCTATG	-65003974	True	NA	-17	True	ATTAAA	-28	NA	65006659	65006083	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_65006323_65006540
transcript_179411.known	chr7	+	2238	11	FSM	ENSG00000234585.6	ENST00000426828.5	2238	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	14.3069912979634	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGGTCTTGCAATGGT	65037985	True	NA	NA	False	AATAAA	-18	NA	65038359	65074713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_65038566_65064998_65065134_65066252_65066427_65066944_65067051_65068455_65068611_65068708_65068791_65069660_65069758_65070345_65070485_65070908_65071043_65073440_65073515_65073777
transcript_179413.known	chr7	+	3165	4	FSM	ENSG00000146757.14	ENST00000328747.12	3165	4	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_3	10.6144555520604	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTAGTGTATTCGATGAAG	65369069	True	NA	8	True	ATTAAA	-21	NA	65373854	65401136	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_65374001_65387901_65388029_65388805_65388902_65398340
transcript_179416.known	chr7	+	2957	3	FSM	ENSG00000146757.14	ENST00000450302.2	2957	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	46	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGATTGTGTGTGAACTT	65369095	True	NA	18	True	AATAAA	-19	NA	65373880	65401081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_65374001_65388805_65388902_65398340
transcript_179419.known	chr7	+	2947	2	FSM	ENSG00000146757.14	ENST00000431504.1	2947	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCATGCTAAGACTAGTGT	65369053	True	NA	-3	True	ATTAAA	-10	NA	65373838	65401125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_65374001_65398340
transcript_17942.known	chr1	-	10863	28	FSM	ENSG00000066279.19	ENST00000367409.9	10863	28	0	0	0	0	multi-exon	FALSE	canonical	2	27	junction_24	60.4648658313239	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATTATTCCTGTCTATT	-197142103	True	NA	NA	False	AATAAA	-20	NA	197146669	197084126	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_197084427_197086802_197086973_197088255_197088433_197089929_197090085_197090195_197090389_197090849_197091042_197091906_197092057_197093051_197093262_197094083_197094181_197095997_197096165_197100430_197105186_197117788_197117984_197121914_197122044_197122158_197122302_197122387_197122596_197124109_197124332_197124869_197124956_197125045_197125192_197128489_197128666_197129186_197129318_197129914_197130057_197132284_197132353_197133349_197133596_197135095_197135243_197139766_197139872_197142330_197143811_197143956_197144101_197146140
transcript_179434.known	chr7	+	1317	11	FSM	ENSG00000228409.7	ENST00000688478.1	2258	11	73	868	0	18	multi-exon	FALSE	canonical	3	9	junction_2	29.6033781856058	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCCTCTGTATCTGAGT	65749948	True	NA	NA	False	NA	NA	NA	65751141	65763354	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_65751279_65752163_65752311_65755779_65755953_65756468_65756575_65757982_65758138_65758235_65758318_65759174_65759272_65759859_65759999_65760423_65760557_65762946_65763021_65763280
transcript_179436.known	chr7	+	5895	3	FSM	ENSG00000196715.7	ENST00000648179.1	5895	3	0	0	0	0	multi-exon	FALSE	canonical	3	492	junction_2	22	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTCTTTCATGGAGCT	65870444	True	NA	20	True	AATAAA	-20	NA	65873269	65959562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_65873566_65948670_65948781_65954073
transcript_17944.known	chr1	-	2434	4	FSM	ENSG00000066279.19	ENST00000679766.1	2434	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	7.40870359029762	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATCAGTAGGGTCACTAT	-197142088	True	NA	NA	False	AATAAA	-15	NA	197146654	197139575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_197139872_197142330_197143811_197143956_197144101_197146140
transcript_179445.known	chr7	+	1541	2	FSM	ENSG00000196715.7	ENST00000434382.2	1541	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGACATGCTGCCCAGT	65870543	True	NA	NA	False	NA	NA	NA	65873368	65955417	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_65873566_65954073
transcript_179450.known	chr7	-	2199	12	FSM	ENSG00000169919.17	ENST00000304895.9	2199	12	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_6	81.824444204782	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTGAAATCATTTCTGT	-65977891	True	NA	-7	True	AATAAA	-29	NA	65982213	65960683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_65961064_65964322_65964459_65967730_65967908_65970281_65970367_65974294_65974442_65974525_65974705_65974918_65975072_65976014_65976203_65979398_65979542_65979726_65979912_65980223_65980410_65981973
transcript_179455.known	chr7	-	1983	11	FSM	ENSG00000169919.17	ENST00000447929.5	1983	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_9	110.050897315742	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGCTACTGAAAAGCATCT	-65977874	True	NA	-21	True	AATAAA	-38	NA	65982196	65960697	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_65961064_65964322_65964459_65967730_65967908_65970281_65970367_65974294_65974442_65974525_65974705_65974918_65975072_65976014_65976203_65979398_65979542_65980223_65980410_65981973
transcript_179456.nic	chr7	-	2097	11	NIC	ENSG00000169919.17	novel	2199	12	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	3	154	junction_6	53.2413373235496	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTGAAATCATTTCTGT	NA	False	NA	-7	True	AATAAA	-29	NA	65982264	65960683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_65961064_65964322_65964459_65967730_65967908_65970281_65970367_65974294_65974442_65974525_65974705_65976014_65976203_65979398_65979542_65979726_65979912_65980223_65980410_65981973
transcript_179506.known	chr7	+	2140	17	FSM	ENSG00000126522.17	ENST00000304874.14	2140	17	0	0	0	0	multi-exon	FALSE	canonical	1	54	junction_14	41.3655578349912	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAACAACTAGCCAAACTG	66073646	True	NA	NA	False	ATTAAA	-24	NA	66075818	66093576	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66075857_66076038_66076094_66081802_66081998_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66086743_66086822_66087333_66087387_66087728_66087792_66088806_66088922_66089090_66089176_66089275_66089336_66089611_66089696_66092005_66092087_66092556_66092664_66092767
transcript_179510.known	chr7	+	1436	16	FSM	ENSG00000126522.17	ENST00000673518.1	1436	16	0	0	0	0	multi-exon	FALSE	canonical	1	24	junction_7	55.1505414499461	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTGCTGTGTGTTTCCTG	66073649	True	NA	7	True	AATAAA	-15	NA	66075821	66092953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66075857_66076038_66076094_66081802_66081998_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66087333_66087387_66087728_66087792_66088806_66088922_66089090_66089176_66089275_66089336_66089611_66089696_66092005_66092087_66092556_66092664_66092767
transcript_179515.known	chr7	+	1608	16	FSM	ENSG00000126522.17	ENST00000395332.8	1608	16	0	0	0	0	multi-exon	FALSE	canonical	1	54	junction_13	39.3511823908197	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAAAGTGGGCGCGAGAG	66073716	True	NA	-14	True	NA	NA	NA	66075888	66092932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66076094_66081802_66081998_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66086743_66086822_66087333_66087387_66087728_66087792_66088806_66088922_66089090_66089176_66089275_66089336_66089611_66089696_66092005_66092087_66092556_66092664_66092767
transcript_179528.known	chr7	+	1478	15	FSM	ENSG00000126522.17	ENST00000395331.4	1478	15	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_11	57.1586138990191	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACACCTGCCCCCTAATA	66073771	False	NA	-29	True	NA	NA	NA	66075943	66092917	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66076094_66081802_66081998_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66086743_66086822_66087333_66087387_66087728_66087792_66088806_66088922_66089090_66089176_66089611_66089696_66092005_66092087_66092556_66092664_66092767
transcript_17953.nic	chr1	-	1293	2	ISM	ENSG00000177888.8	ENST00000367405.5	8595	11	-27	45714	-27	-40954	5prime_fragment	FALSE	canonical	3	10	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCAGTGTCCTAAATGT	-197200491	True	NA	NA	False	NA	NA	NA	197201320	197199395	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_197200591_197201222
transcript_179530.known	chr7	+	1974	15	FSM	ENSG00000126522.17	ENST00000380839.9	1974	15	0	0	0	0	multi-exon	FALSE	canonical	1	24	junction_6	54.90738956253	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAATGGAAGCGGAG	66073674	True	NA	NA	False	AATAAA	-11	NA	66075846	66093334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66076094_66081802_66081998_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66087333_66087387_66087728_66087792_66088806_66088922_66089090_66089176_66089275_66089336_66089611_66089696_66092005_66092087_66092556_66092664_66092767
transcript_179532.known	chr7	+	1388	15	FSM	ENSG00000126522.17	ENST00000362000.10	1388	15	0	0	0	0	multi-exon	FALSE	canonical	1	19	junction_1	55.8715728529386	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTGTGTTTCCTGCC	66073764	True	NA	9	True	AATAAA	-17	NA	66075936	66092955	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66076094_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66086743_66086822_66087333_66087387_66087728_66087792_66088806_66088922_66089090_66089176_66089275_66089336_66089611_66089696_66092005_66092087_66092556_66092664_66092767
transcript_179536.known	chr7	+	2441	14	FSM	ENSG00000126522.17	ENST00000672676.1	2441	14	0	0	0	0	multi-exon	FALSE	canonical	1	54	junction_11	40.2846381516071	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGTGGGCGCGAGAGGA	66073739	True	NA	-12	True	NA	NA	NA	66075911	66092934	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66076094_66081802_66081998_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66086743_66087792_66088806_66088922_66089090_66089176_66089275_66089336_66089611_66089696_66092005_66092087_66092556_66092664_66092767
transcript_17954.known	chr1	-	8595	11	FSM	ENSG00000177888.8	ENST00000367405.5	8595	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	3.3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCATATCTAGGTTTTA	-197200464	True	NA	NA	False	AATAAA	-22	NA	197201293	197153681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_197160015_197172159_197172249_197175009_197175116_197176563_197176671_197178416_197178513_197180987_197181118_197188291_197188440_197190761_197190832_197191691_197191900_197199353_197200591_197201222
transcript_17955.known	chr1	-	8365	23	FSM	ENSG00000213047.13	ENST00000620048.6	8365	23	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	3.14655787270487	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCATGGTGATGACTCT	-197775470	False	NA	NA	False	AATAAA	-17	NA	197775480	197504747	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_197510973_197511727_197511945_197512870_197512954_197539963_197540072_197540958_197541016_197545921_197545991_197546732_197546774_197553021_197553113_197583151_197583254_197595207_197595334_197607072_197607175_197611930_197611977_197617658_197617760_197642710_197642822_197645689_197645744_197647054_197647115_197652234_197652316_197658299_197658370_197672036_197672157_197674119_197674170_197715030_197715075_197772867_197772933_197775138
transcript_179562.known	chr7	+	2774	6	FSM	ENSG00000241258.7	ENST00000395326.8	2774	6	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	6.82934843158555	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGATTTTTTTCTTAAA	66111577	True	NA	17	True	AATAAA	-24	NA	66114846	66154568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66114971_66127703_66127741_66130743_66130843_66134279_66134375_66145442_66145501_66152207
transcript_179570.known	chr7	+	1393	5	FSM	ENSG00000241258.7	ENST00000338592.5	1393	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	26.7616796931732	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACCAGGGGTGATGGCAC	66111580	True	NA	NA	False	AATACA	-4	NA	66114849	66153289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66114971_66127703_66127741_66134279_66134375_66145442_66145501_66152207
transcript_179576.known	chr7	+	492	3	FSM	ENSG00000241258.7	ENST00000398684.6	492	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	37	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTGCCTTGGGGAGA	66111571	True	NA	NA	False	AAAAAG	-3	NA	66114840	66152511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66114971_66145442_66145501_66152207
transcript_179579.nnic	chr7	+	3139	6	NNC	ENSG00000169902.15	novel	1981	6	NA	NA	-48	-3	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_5	32.8	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTCTGGTAGTTACATGT	NA	False	NA	15	True	AATAAA	-16	NA	66205268	66360440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_66205523_66240324_66241271_66286510_66286710_66352504_66352556_66356824_66356872_66358798
transcript_179580.nnic	chr7	+	2818	6	NNC	ENSG00000169902.15	novel	1981	6	NA	NA	-3	-7	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_5	33.9611542795589	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCATTCTGGTAGTTAC	66202233	True	NA	11	True	AATAAA	-12	NA	66205330	66360436	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_66205523_66240324_66241271_66286510_66286710_66352504_66352556_66356824_66356872_66359053
transcript_179581.known	chr7	+	1981	6	FSM	ENSG00000169902.15	ENST00000304842.6	1981	6	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_5	18.1703054459742	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGTAGTTACATGTTTT	66202236	True	NA	18	True	AATAAA	-19	NA	66205333	66360443	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66205523_66240324_66241271_66286510_66286710_66352504_66352556_66356824_66356872_66359894
transcript_179589.known	chr7	+	454	2	FSM	ENSG00000237310.3	ENST00000452565.1	454	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTTCTGGTTTTTGGGG	66493294	True	NA	12	True	ATTAAA	-23	NA	66493785	66495472	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66494022_66495254
transcript_179598.nic	chr7	-	2117	5	ISM	ENSG00000229180.8	ENST00000649635.1	2602	9	-41	22786	-7	175	5prime_fragment	FALSE	canonical	3	33	junction_4	13.9171656597168	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCTTTTTTTTGGAGAC	-66590257	True	NA	NA	False	ATTAAA	-40	NA	66592404	66553309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_66554838_66560578_66560676_66573384_66573551_66576754_66576933_66592256
transcript_1796.known	chr1	-	6559	23	FSM	ENSG00000116198.14	ENST00000674623.1	6559	23	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_22	25.025771840212	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGTCACTTTATTTCA	-3853969	True	NA	NA	False	AATAAA	-13	NA	3857211	3812085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3815518_3816279_3816371_3823173_3823242_3823423_3823563_3825757_3825867_3826369_3826437_3826707_3826745_3829265_3829374_3829790_3829998_3831045_3831223_3833861_3834036_3834924_3835093_3836494_3836693_3837291_3837520_3838963_3839120_3839607_3839777_3844906_3844984_3845288_3845352_3847474_3847614_3848607_3848782_3852294_3852422_3855873_3856002_3856888
transcript_179602.nic	chr7	-	1858	5	ISM	ENSG00000229180.8	ENST00000649635.1	2602	9	-41	23045	-7	-84	5prime_fragment	FALSE	canonical	3	33	junction_4	13.9171656597168	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATATCATGGATTTCATT	-66590257	True	NA	-3	True	TATAAA	-22	NA	66592404	66553568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_66554838_66560578_66560676_66573384_66573551_66576754_66576933_66592256
transcript_179606.nic	chr7	-	1670	5	ISM	ENSG00000229180.8	ENST00000649635.1	2602	9	-41	23233	-7	-272	5prime_fragment	FALSE	canonical	3	33	junction_4	13.9171656597168	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGGTAGTTGAGCAGCT	-66590257	True	NA	-2	True	AATAAA	-26	NA	66592404	66553756	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_66554838_66560578_66560676_66573384_66573551_66576754_66576933_66592256
transcript_179610.nic	chr7	-	2020	4	ISM	ENSG00000229180.8	ENST00000686397.1	1520	5	-61	8459	-7	175	5prime_fragment	FALSE	canonical	3	33	junction_3	22.905603390146	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCTTTTTTTTGGAGAC	-66590257	True	NA	NA	False	ATTAAA	-40	NA	66592404	66553309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_66554838_66573384_66573551_66576754_66576933_66592256
transcript_179612.nic	chr7	-	1687	4	ISM	ENSG00000229180.8	ENST00000686269.1	1853	7	-78	23262	-14	-84	5prime_fragment	FALSE	canonical	3	67	junction_1	17.4419672692682	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATATCATGGATTTCATT	-66590264	True	NA	-3	True	TATAAA	-22	NA	66592411	66553568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_66554838_66560578_66560676_66573384_66573551_66592256
transcript_179614.nic	chr7	-	1761	4	ISM	ENSG00000229180.8	ENST00000686397.1	1520	5	-61	8718	-7	-84	5prime_fragment	FALSE	canonical	3	33	junction_3	22.905603390146	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATATCATGGATTTCATT	-66590257	True	NA	-3	True	TATAAA	-22	NA	66592404	66553568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_66554838_66573384_66573551_66576754_66576933_66592256
transcript_179615.nic	chr7	-	1499	4	ISM	ENSG00000229180.8	ENST00000686269.1	1853	7	-78	23450	-14	-272	5prime_fragment	FALSE	canonical	3	67	junction_1	17.4419672692682	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGGTAGTTGAGCAGCT	-66590264	True	NA	-2	True	AATAAA	-26	NA	66592411	66553756	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_66554838_66560578_66560676_66573384_66573551_66592256
transcript_179619.nic	chr7	-	1849	3	ISM	ENSG00000229180.8	ENST00000690339.1	824	4	-14	7887	-14	175	5prime_fragment	FALSE	canonical	3	89	junction_1	7.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCTTTTTTTTGGAGAC	-66590264	True	NA	NA	False	ATTAAA	-40	NA	66592411	66553309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_66554838_66573384_66573551_66592256
transcript_17962.known	chr1	+	600	3	FSM	ENSG00000203724.11	ENST00000367393.8	600	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAACAAATGTTTGTGTGT	197902565	True	NA	NA	False	AATAAA	-9	NA	197902629	197907362	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_197902914_197905795_197905898_197907148
transcript_179620.nic	chr7	-	1674	3	ISM	ENSG00000229180.8	ENST00000690339.1	824	4	-14	8062	-14	0	5prime_fragment	FALSE	canonical	3	89	junction_1	7.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTTGAAAGATAGGCACAA	-66590264	True	NA	81	True	NA	NA	NA	66592411	66553484	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_66554838_66573384_66573551_66592256
transcript_179621.nic	chr7	-	1590	3	ISM	ENSG00000229180.8	ENST00000690339.1	824	4	-14	8146	-14	-84	5prime_fragment	FALSE	canonical	3	89	junction_1	7.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATATCATGGATTTCATT	-66590264	True	NA	-3	True	TATAAA	-22	NA	66592411	66553568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_66554838_66573384_66573551_66592256
transcript_179622.nic	chr7	-	1391	3	ISM	ENSG00000229180.8	ENST00000690339.1	824	4	-14	8345	-14	-283	5prime_fragment	FALSE	canonical	3	89	junction_1	7.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTAAAAAATTCTTGGTA	-66590264	True	NA	-13	True	AATAAA	-15	NA	66592411	66553767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_66554838_66573384_66573551_66592256
transcript_179624.known	chr7	-	563	3	FSM	ENSG00000229180.8	ENST00000639153.2	635	3	0	72	0	-72	multi-exon	FALSE	canonical	3	20	junction_1	8.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGTGTATTCTTCTAGT	-66590239	True	NA	-11	True	TATAAA	-15	NA	66592386	66584102	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_66584467_66588511_66588581_66592256
transcript_179627.nnic	chr7	-	496	2	NIC	ENSG00000229180.8	novel	635	3	NA	NA	-5	-86	combination_of_known_splicesites	FALSE	canonical	3	30	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGTACAGAGAAGTCCTG	-66590255	True	NA	-25	True	TATAAA	-1	NA	66592402	66584116	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_66584467_66592256
transcript_179628.known	chr7	+	1704	6	FSM	ENSG00000243335.10	ENST00000640234.1	1704	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	19.8454024902495	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAATAATAATAATAATAAT	66629136	False	NA	NA	False	NA	NA	NA	66629194	66649067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66629209_66633274_66633445_66638252_66638432_66638855_66638930_66643534_66643612_66647877
transcript_179629.known	chr7	+	4118	5	FSM	ENSG00000243335.10	ENST00000640385.1	4118	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	19.6134520164096	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCAAGAACTAGAACCTGG	66627974	True	NA	-10	True	NA	NA	NA	66628884	66643032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66629209_66633274_66633445_66638252_66638432_66638855_66639229_66639960
transcript_179632.known	chr7	+	4869	4	FSM	ENSG00000243335.10	ENST00000639828.2	4869	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	4.64279609239471	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGTGCTGTGCCTTTCT	66627970	True	NA	5	True	ATTAAA	-15	NA	66628880	66643047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66629209_66633274_66633445_66638252_66638432_66638855
transcript_179635.known	chr7	+	4795	4	FSM	ENSG00000243335.10	ENST00000275532.8	4795	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	23.8374122383748	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCAAGGGCATTAAAGTCA	66627974	True	NA	-25	True	NA	NA	NA	66628884	66643017	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66629209_66633274_66633445_66638252_66638392_66638855
transcript_179637.known	chr7	+	625	5	FSM	ENSG00000226824.8	ENST00000656515.2	929	5	46	258	-11	44	multi-exon	FALSE	canonical	1	1	junction_2	1.87082869338697	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCACAGCCCCCAGAGGC	66652607	True	NA	NA	False	NA	NA	NA	66654566	66669342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66654627_66666113_66666203_66667397_66667611_66668763_66668914_66669229
transcript_179638.known	chr7	+	1172	5	FSM	ENSG00000226824.8	ENST00000657342.1	1172	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.58113883008419	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCTTATTGAATGAGATGA	66652618	True	NA	NA	False	AATAAA	-2	NA	66654577	66670413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66654627_66666113_66666203_66667397_66667611_66668763_66668914_66669742
transcript_17964.known	chr1	+	4114	10	FSM	ENSG00000151414.15	ENST00000367385.9	4114	10	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	15.663120165961	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGGTATCTATGATTT	198155325	True	NA	NA	False	AATAAA	-17	NA	198156997	198322420	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_198157277_198232552_198232638_198253039_198253181_198262574_198262638_198264124_198264236_198277960_198278070_198278953_198279062_198292944_198293040_198297126_198297241_198319411
transcript_179652.known	chr7	+	3733	9	FSM	ENSG00000154710.18	ENST00000284957.9	3733	9	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_3	20.6514981296757	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTTGGTTCTTTCTTAG	66737428	True	NA	20	True	AATAAA	-29	NA	66740732	66811464	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66740793_66771882_66772079_66775226_66775394_66783674_66783842_66795510_66795593_66797373_66797507_66799322_66799415_66805139_66805397_66808885
transcript_179655.nic	chr7	+	2031	8	NIC	ENSG00000106609.16	novel	4229	7	NA	NA	-102	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	185.461476279236	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAGTTAGGACAGACTTG	66921093	False	NA	11	True	AATAAA	-21	NA	66921122	66956153	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_66921462_66922148_66922247_66941847_66942025_66944975_66945262_66948543_66948695_66950951_66951136_66953225_66953370_66955501
transcript_179656.known	chr7	+	4229	7	FSM	ENSG00000106609.16	ENST00000341567.8	4229	7	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_1	26.455413224686	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTCCGCGTCTTCTTCC	66916014	True	NA	13	True	AATAAA	-14	NA	66921224	66958551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66921462_66941847_66942025_66944975_66945262_66948543_66948695_66950951_66951136_66953225_66953370_66955501
transcript_179662.known	chr7	+	1610	6	FSM	ENSG00000106609.16	ENST00000433271.6	1610	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	165.971804834436	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAGTTAGGACAGACTTG	66916051	True	NA	11	True	AATAAA	-21	NA	66921261	66956153	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66921462_66941847_66942025_66944975_66945262_66948543_66948695_66953225_66953370_66955501
transcript_179665.nic	chr7	+	1372	4	ISM	ENSG00000106609.16	ENST00000433271.6	1610	6	-85	6986	-48	-2168	5prime_fragment	FALSE	canonical	3	374	junction_1	32.273139846559	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAAAAGAGGCTCTC	66915966	True	NA	NA	False	AAAAAG	-11	NA	66921176	66949167	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_66921462_66941847_66942025_66944975_66945262_66948543
transcript_179666.known	chr7	+	3330	16	FSM	ENSG00000198874.14	ENST00000359626.10	3330	16	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_9	13.5095028282564	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCAGCATGAGTTTTTTA	66994980	True	NA	8	True	AATAAA	-18	NA	66996832	67239514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66996983_66998064_66998196_66998816_66998955_67009582_67009685_67014366_67014562_67017852_67018144_67024899_67025023_67049948_67050067_67055834_67055888_67067284_67067404_67083429_67083540_67098540_67098719_67117482_67117619_67183125_67183237_67195169_67195338_67238307
transcript_179667.known	chr7	+	3255	15	FSM	ENSG00000198874.14	ENST00000361660.8	3255	15	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_8	32.2924297693463	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGCAGCATGAGTTTTT	66995000	True	NA	6	True	AATAAA	-16	NA	66996852	67239512	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_66996983_66998064_66998196_66998816_66998955_67009582_67009685_67014366_67014562_67017852_67018144_67024899_67025023_67049948_67050067_67067284_67067404_67083429_67083540_67098540_67098719_67117482_67117619_67183125_67183237_67195169_67195338_67238307
transcript_179669.nic	chr7	+	1180	7	ISM	ENSG00000198874.14	ENST00000359626.10	3330	16	-51	214493	-38	7140	5prime_fragment	FALSE	canonical	3	115	junction_2	11.3137084989848	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACCGTTACTTTGGGAAA	NA	False	NA	NA	False	AAGAAA	-6	NA	66996781	67025021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_66996983_66998064_66998196_66998816_66998955_67009582_67009685_67014366_67014562_67017852_67018144_67024899
transcript_179673.known	chr7	-	1613	5	FSM	ENSG00000126524.11	ENST00000246868.7	1613	5	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_4	27.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTTCCTAACTCCCTTTC	-66991219	True	NA	88	True	AATAAA	-42	NA	66995586	66987679	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_66988500_66991136_66991302_66993216_66993418_66994211_66994342_66995289
transcript_179674.nic	chr7	-	693	4	ISM	ENSG00000126524.11	ENST00000246868.7	1613	5	-31	3588	-31	-131	5prime_fragment	FALSE	canonical	3	253	junction_3	31.7525152109596	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGATAGAACGTGCTCAC	-66991250	True	NA	13	True	GATAAA	-18	NA	66995617	66991267	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_66991302_66993216_66993418_66994211_66994342_66995289
transcript_179676.known	chr7	-	1531	5	FSM	ENSG00000126524.11	ENST00000414306.5	1531	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	128.776938929297	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATTGTATGTAATCAAT	-66991209	True	NA	24	True	AATATA	-13	NA	66995576	66987743	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_66988500_66991136_66991302_66993216_66993418_66994219_66994342_66995289
transcript_179686.known	chr7	+	2143	5	FSM	ENSG00000106610.16	ENST00000416602.6	2143	5	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	13.4420050587701	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTCAAACTTATCTTTTTT	NA	False	NA	NA	False	ACTAAA	-16	NA	67302620	67321526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_67302886_67305986_67306084_67308934_67309140_67309563_67309716_67320102
transcript_179693.known	chr7	+	3909	11	FSM	ENSG00000185274.12	ENST00000333538.10	3909	11	0	0	0	0	multi-exon	TRUE	canonical	3	214	junction_6	21.0580151011438	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCAGCCTCCTTTGTGTCT	71130052	True	NA	18	True	AATAAA	-20	NA	71132143	71713599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_71133041_71335549_71335734_71388234_71388402_71415888_71416064_71420907_71421106_71571284_71571403_71665410_71665597_71669971_71670110_71677210_71677307_71710760_71710929_71712017
transcript_1797.known	chr1	-	5326	22	FSM	ENSG00000116198.14	ENST00000675375.1	5326	22	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_14	18.7061050822168	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATACACACATATAC	-3853983	True	NA	NA	False	AATATA	-4	NA	3857225	3813030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3815518_3816279_3816371_3823173_3823242_3823423_3823563_3825757_3825867_3826369_3826437_3826707_3826745_3829265_3829374_3829790_3829998_3831045_3831223_3833861_3834036_3834924_3835093_3836494_3836693_3837291_3837346_3838963_3839120_3839607_3839777_3844906_3844984_3845288_3845352_3847474_3847614_3848607_3848782_3852294_3852422_3856888
transcript_179709.nnic	chr7	+	2452	2	NNC	ENSG00000185274.12	novel	3909	11	NA	NA	-798	-275060	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCAGACATTGTGGTGC	71130877	True	NA	NA	False	AATAAA	-4	NA	71131345	71140871	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_71133041_71140114
transcript_179710.nnic	chr7	+	2969	2	NNC	ENSG00000185274.12	novel	3909	11	NA	NA	-798	-274543	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAAAGACAGACTG	71130877	True	NA	NA	False	AAAAAG	-5	NA	71131345	71141388	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_71133041_71140114
transcript_179711.known	chr7	+	3012	10	FSM	ENSG00000185274.12	ENST00000618959.1	3012	10	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_5	20.1335050274749	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCAGCCTCCTTTGTGTC	NA	False	NA	17	True	AATAAA	-19	NA	71335548	71713598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_71335734_71388234_71388402_71415888_71416064_71420907_71421106_71571284_71571403_71665410_71665597_71669971_71670110_71677210_71677307_71710760_71710929_71712017
transcript_179714.known	chr7	-	9243	6	FSM	ENSG00000183166.11	ENST00000329008.9	9243	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	13.2574507353412	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGATTCCATTCATTAT	-72336980	False	NA	NA	False	AATAAA	-19	NA	72336995	71779490	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_71787903_71810335_71810493_72023656_72023770_72106150_72106295_72278685_72278811_72336703
transcript_179720.known	chr7	-	3117	14	FSM	ENSG00000277149.5	ENST00000620995.5	3117	14	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_6	13.6862562254057	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCAGCATGAGTTTTTTT	-72827518	True	NA	-5	True	AATAAA	-18	NA	72828200	72574512	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_72575720_72616671_72616840_72628886_72628998_72694686_72694823_72713620_72713799_72728821_72728932_72744483_72744602_72777415_72777534_72802399_72802523_72807065_72807357_72810470_72810666_72815379_72815482_72826854_72826986_72828071
transcript_179729.known	chr7	+	737	5	FSM	ENSG00000225648.6	ENST00000453858.2	1621	5	189	695	149	63	multi-exon	FALSE	canonical	3	50	junction_1	52.9734603362854	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACACCCATCAGTCTCTTC	72829638	False	NA	NA	False	NA	NA	NA	72829655	72836701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_72829784_72830691_72830814_72831601_72831799_72833763_72833929_72836576
transcript_179733.nic	chr7	+	1520	4	FSM	ENSG00000225648.6	ENST00000685034.1	1489	4	-34	3	1	0	multi-exon	FALSE	canonical	3	81	junction_1	44.6542271235322	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGCTTGTGTTTCTAGA	72827775	True	NA	NA	False	AATAAA	-22	NA	72829425	72837376	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_72829784_72831601_72831799_72833763_72833929_72836576
transcript_179734.nic	chr7	+	2489	4	NIC	ENSG00000225648.6	novel	1621	5	NA	NA	-3	0	intron_retention	FALSE	canonical	3	74	junction_1	47.2605073560955	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGCTTGTGTTTCTAGA	72827836	True	NA	NA	False	AATAAA	-22	NA	72829486	72837376	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_72830814_72831601_72831799_72833763_72833929_72836576
transcript_179735.known	chr7	+	618	3	FSM	ENSG00000225648.6	ENST00000423945.5	618	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	36.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAAAGGTTCTTTGGAAG	72829389	False	NA	NA	False	AATAAA	-13	NA	72829424	72836638	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_72829784_72831601_72831799_72836576
transcript_179736.known	chr7	+	733	3	FSM	ENSG00000225648.6	ENST00000415772.5	733	3	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	54	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACATTGTAAACAGTCAGA	72827839	True	NA	NA	False	AATAAA	-17	NA	72829489	72834005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_72829784_72831601_72831799_72833763
transcript_179744.known	chr7	+	5842	13	FSM	ENSG00000196313.13	ENST00000434423.5	5842	13	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	53.6984248682709	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTACGTTCTGCATTTTAT	72922376	True	NA	NA	False	AATAAA	-19	NA	72925094	72948299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_72925766_72926261_72926478_72926801_72926964_72928384_72928466_72929939_72930112_72938589_72938682_72939335_72939410_72939846_72939969_72940413_72940517_72940816_72940994_72941836_72943523_72945585_72945709_72946136
transcript_179747.known	chr7	-	1647	12	FSM	ENSG00000106133.18	ENST00000485741.6	1647	12	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	186.270264857942	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	-72953849	True	NA	-6	True	AATAAA	-18	NA	72954720	72948297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_72948598_72948667_72948809_72948891_72948981_72949052_72949103_72949312_72949492_72949845_72949962_72950057_72950197_72952151_72952296_72953325_72953431_72953510_72953678_72954358_72954480_72954624
transcript_179752.nnic	chr7	-	2489	11	NNC	ENSG00000106133.18	novel	1647	12	NA	NA	-11	0	intron_retention	FALSE	canonical	3	64	junction_4	174.901943957178	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	NA	False	NA	-6	True	AATAAA	-18	NA	72954801	72948297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_72948598_72948667_72948809_72948891_72948981_72949102_72949233_72949312_72949492_72949845_72949962_72950057_72950197_72952151_72952296_72953325_72953431_72953510_72954480_72954624
transcript_179760.nnic	chr7	-	2509	10	NNC	ENSG00000106133.18	novel	1647	12	NA	NA	-21	0	intron_retention	FALSE	canonical	3	87	junction_1	170.167890952174	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	-72953870	True	NA	-6	True	AATAAA	-18	NA	72954741	72948297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_72948598_72948667_72948809_72948891_72948981_72949102_72949492_72949845_72949962_72950057_72950197_72952151_72952296_72953325_72953431_72953510_72954480_72954624
transcript_179766.nnic	chr7	-	2557	10	NNC	ENSG00000106133.18	novel	1647	12	NA	NA	-11	-2	intron_retention	FALSE	canonical	3	64	junction_3	173.315882312408	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGATAGATCACAGTTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	72954801	72948299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_72948809_72948891_72948981_72949102_72949233_72949312_72949492_72949845_72949962_72950057_72950197_72952151_72952296_72953325_72953431_72953510_72954480_72954624
transcript_179790.nnic	chr7	-	2637	9	NNC	ENSG00000106133.18	novel	1647	12	NA	NA	-11	-2	intron_retention	FALSE	canonical	3	109	junction_5	163.940538000825	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGATAGATCACAGTTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	72954801	72948299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_72948809_72948891_72948981_72949102_72949492_72949845_72949962_72950057_72950197_72952151_72952296_72953325_72953431_72953510_72954480_72954624
transcript_1798.known	chr1	-	6435	22	FSM	ENSG00000116198.14	ENST00000674985.1	6435	22	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_13	20.5377811244238	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGTCACTTTATTTCA	-3853969	True	NA	NA	False	AATAAA	-13	NA	3857211	3812085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3815518_3816279_3816371_3823173_3823242_3823423_3823563_3825757_3825867_3826369_3826437_3826707_3826745_3829265_3829374_3829790_3829998_3831045_3831223_3833861_3834036_3834924_3835093_3836494_3836693_3837287_3837520_3838963_3839120_3839607_3839777_3844906_3844984_3845288_3845352_3847474_3847614_3848607_3848782_3852294_3852422_3856888
transcript_17981.nic	chr1	+	5469	7	ISM	ENSG00000116833.14	ENST00000367362.8	4969	8	11246	0	-3869	0	3prime_fragment	FALSE	canonical	3	38	junction_3	12.7627931460511	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAAAGTTTTTATGTT	200038143	True	NA	11	True	AATAAA	-24	NA	200038955	200177415	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_200039796_200043773_200043893_200045442_200045585_200048171_200048819_200111201_200111322_200120807_200120956_200173962
transcript_179823.nic	chr7	-	2759	8	NIC	ENSG00000106133.18	novel	1789	11	NA	NA	-11	-2	intron_retention	FALSE	canonical	3	109	junction_4	162.98002882537	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGATAGATCACAGTTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	72954801	72948299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_72948809_72948891_72949492_72949845_72949962_72950057_72950197_72952151_72952296_72953325_72953431_72953510_72954480_72954624
transcript_179828.known	chr7	-	1180	7	FSM	ENSG00000106133.18	ENST00000444583.6	1180	7	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	201.64875953554	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCACAGTTTTTTATTCTT	-72953842	True	NA	-1	True	AATAAA	-23	NA	72954713	72948292	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_72948598_72948667_72948809_72948891_72949103_72949312_72949492_72949845_72949962_72950057_72950197_72954624
transcript_179847.nnic	chr7	-	1402	6	NNC	ENSG00000106133.18	novel	1647	12	NA	NA	6	-2	intron_retention	FALSE	canonical	3	154	junction_2	183.55119176949	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGATAGATCACAGTTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	72954784	72948299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_72948809_72948891_72948981_72949102_72949492_72949845_72949962_72950057_72950197_72954624
transcript_179849.nnic	chr7	-	1322	6	NNC	ENSG00000106133.18	novel	1385	10	NA	NA	6	-2	intron_retention	FALSE	canonical	3	47	junction_2	208.978467790344	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGATAGATCACAGTTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	72954784	72948299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_72948809_72948891_72949103_72949304_72949492_72949845_72949962_72950057_72950197_72954624
transcript_179850.nic	chr7	-	1314	6	NIC	ENSG00000106133.18	novel	1385	10	NA	NA	6	-2	intron_retention	FALSE	canonical	3	95	junction_2	196.828453227677	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGATAGATCACAGTTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	72954784	72948299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_72948809_72948891_72949103_72949312_72949492_72949845_72949962_72950057_72950197_72954624
transcript_179858.known	chr7	-	1776	5	FSM	ENSG00000106133.18	ENST00000602348.5	1776	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	236.915069170367	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTCTTTTAATTTAGA	-72953835	True	NA	NA	False	AATAAA	-25	NA	72954706	72947580	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_72948809_72948891_72949103_72949845_72949962_72950057_72950197_72954624
transcript_179866.known	chr7	-	708	1	FSM	ENSG00000272843.1	ENST00000608799.1	708	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAGTCTGCCAATACACT	-72925115	False	NA	NA	False	AATAAA	-16	NA	72925125	72924417	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_72924400_72925100
transcript_179879.nnic	chr7	-	2337	10	NNC	ENSG00000174353.17	novel	1067	8	NA	NA	-16	3529	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.1901411245857	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTTGAGATCAGTGTGG	-73001028	True	NA	NA	False	AAAACA	-4	NA	73005938	72993529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_72993930_72997402_72998365_72998675_72998791_72999054_72999163_72999470_72999551_72999760_72999860_73000357_73000482_73003020_73003138_73003644_73003731_73005692
transcript_179897.known	chr7	-	2137	8	FSM	ENSG00000174353.17	ENST00000428423.5	2137	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	17.7981883966903	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAAAATTAGGCCGGGCG	-73001008	True	NA	NA	False	NA	NA	NA	73005918	72997058	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_72998365_72998675_72998791_72999054_72999163_72999470_72999551_72999760_72999860_73003020_73003138_73003644_73003731_73005692
transcript_179899.known	chr7	-	1262	8	FSM	ENSG00000174353.17	ENST00000423834.6	1262	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_7	21.3570234110372	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGACAGATGGAGAAG	-73001012	True	NA	NA	False	NA	NA	NA	73005922	72998489	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_72998791_72999054_72999163_72999470_72999551_72999760_72999860_73000357_73000482_73003020_73003138_73003644_73003731_73005575
transcript_179900.nic	chr7	-	1161	8	NIC	ENSG00000174353.17	novel	1262	8	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_5	13.1226552813313	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGACAGATGGAGAAG	-73001028	True	NA	NA	False	NA	NA	NA	73005938	72998489	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_72998791_72999054_72999163_72999470_72999551_72999760_72999860_73000357_73000482_73003020_73003138_73003644_73003731_73005692
transcript_179901.known	chr7	+	1336	7	FSM	ENSG00000229018.5	ENST00000506558.2	1336	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	8.52447456836295	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCACAAATGGTTCCTCT	73005514	True	NA	NA	False	NA	NA	NA	73005540	73021103	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_73006175_73009443_73009584_73011468_73011556_73011731_73011835_73013091_73013278_73016328_73016418_73021006
transcript_179906.nic	chr7	-	1037	7	ISM	ENSG00000174353.17	ENST00000428423.5	2137	8	-20	1431	-16	0	5prime_fragment	FALSE	canonical	3	56	junction_4	8.83962040411741	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGACAGATGGAGAAG	-73001028	True	NA	NA	False	NA	NA	NA	73005938	72998489	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_72998791_72999054_72999163_72999470_72999551_72999760_72999860_73003020_73003138_73003644_73003731_73005692
transcript_179909.known	chr7	-	1716	6	FSM	ENSG00000174353.17	ENST00000448173.5	1716	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	15.3674981698388	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGATGGAGAAGGATGGG	-73001005	True	NA	NA	False	NA	NA	NA	73005915	72998483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_72999551_72999760_72999860_73000357_73000482_73003020_73003138_73003644_73003731_73005692
transcript_179913.nic	chr7	-	1615	5	NIC	ENSG00000174353.17	novel	1716	6	NA	NA	-16	0	intron_retention	FALSE	canonical	3	56	junction_2	9.73396116696589	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGATGGAGAAGGATGGG	-73001028	True	NA	NA	False	NA	NA	NA	73005938	72998483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_72999551_72999760_72999860_73003020_73003138_73003644_73003731_73005692
transcript_179917.known	chr7	+	3609	24	FSM	ENSG00000233369.7	ENST00000544802.5	3609	24	0	0	0	0	multi-exon	FALSE	canonical	3	646	junction_21	490.628241985364	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCACACACTAAGTCATTG	73152585	True	NA	NA	False	AATAAA	-14	NA	73154937	73207283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_73155344_73175414_73175526_73176856_73176923_73179086_73179271_73180538_73180598_73182076_73182149_73183114_73183299_73184660_73184720_73190065_73190138_73191370_73191555_73192496_73192556_73192950_73193026_73194625_73194728_73195635_73195702_73195878_73196063_73197963_73198020_73198692_73198774_73199695_73199780_73200448_73200633_73202111_73202141_73203422_73203465_73204562_73204605_73205382_73205459_73206151
transcript_179921.nic	chr7	+	4360	23	ISM	ENSG00000233369.7	ENST00000544802.5	3609	24	-48	-10	-48	10	intron_retention	FALSE	canonical	3	646	junction_21	501.333008213071	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTCATTGCTCTCTCGGC	73152537	True	NA	NA	False	AATAAA	-24	NA	73154889	73207293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_73155344_73175414_73175526_73176856_73176923_73179086_73179271_73180538_73180598_73182076_73182149_73183114_73183299_73184660_73184720_73190065_73190138_73191370_73191555_73192496_73192556_73192950_73193026_73194625_73194728_73195635_73195702_73195878_73196063_73197963_73198020_73198692_73198774_73199695_73199780_73200448_73200633_73202111_73202141_73203422_73203465_73204562_73204605_73205382
transcript_179925.known	chr7	+	1516	8	FSM	ENSG00000182487.12	ENST00000423083.1	1516	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.40796512546409	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGAGGCTCTGCAGGAATGC	NA	False	NA	NA	False	AATAAA	-17	NA	73220638	73235945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_73220718_73223877_73223957_73227408_73227465_73229566_73230261_73231810_73231891_73234613_73234719_73235188_73235335_73235668
transcript_179926.nnic	chr7	-	1606	11	NNC	ENSG00000130305.17	novel	2336	10	NA	NA	-51	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_3	167.233848248493	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCACAGTTTTTTATTCT	NA	False	NA	-7	True	AATAAA	-22	NA	73308877	73303224	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_73303530_73303599_73303741_73303825_73303915_73303986_73304037_73304229_73304409_73304746_73304863_73304958_73305098_73307393_73307503_73307582_73307758_73308430_73308554_73308697
transcript_17993.known	chr1	+	1768	2	FSM	ENSG00000230623.7	ENST00000634596.2	2379	2	168	443	-12	-443	multi-exon	FALSE	canonical	3	338	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACTTCGATTGGAATA	200406570	True	NA	27	True	AATAAA	-20	NA	200411799	200475513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_200411963_200473908
transcript_179932.known	chr7	-	1602	10	FSM	ENSG00000130305.17	ENST00000310326.8	1602	10	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	166.376413926707	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTACGATAGATCACAGT	-73304395	True	NA	-17	True	AATAAA	-12	NA	73308816	73303234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73303525_73303599_73303741_73303825_73304037_73304229_73304409_73304746_73304863_73304958_73305098_73307393_73307503_73307582_73307758_73308430_73308554_73308697
transcript_179937.known	chr7	-	1672	9	FSM	ENSG00000130305.17	ENST00000252594.10	1672	9	0	0	0	0	multi-exon	FALSE	canonical	3	461	junction_7	63.2351761284809	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATAGATCACAGTTTTTT	-73304385	True	NA	-12	True	AATAAA	-17	NA	73308806	73303229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73303741_73303825_73304037_73304229_73304409_73304746_73304863_73304958_73305098_73307393_73307503_73307582_73307758_73308430_73308554_73308697
transcript_179939.known	chr7	-	2286	9	FSM	ENSG00000130305.17	ENST00000471461.5	2286	9	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	185.172174948074	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCACAGTTTTTTATTCT	-73304395	True	NA	-7	True	AATAAA	-22	NA	73308816	73303224	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73303530_73303599_73303741_73303825_73304037_73304229_73304405_73304746_73304863_73304958_73305098_73307393_73307503_73307582_73308554_73308697
transcript_179961.known	chr7	+	2343	1	FSM	ENSG00000188763.5	ENST00000344575.5	2343	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	194	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGAGTCCTCTCTGGCT	73433423	True	NA	14	True	AATAAA	-14	NA	73433777	73436120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_73433800_73436100
transcript_179963.known	chr7	-	5428	19	FSM	ENSG00000009954.11	ENST00000404251.1	5428	19	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_4	5.50981167476331	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGACAGCTCCTCCCACC	-73517425	True	NA	NA	False	AGTAAA	-39	NA	73522278	73441564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73442554_73442724_73442829_73443983_73444130_73447263_73447380_73449541_73449690_73450846_73450995_73459535_73459719_73462921_73463100_73465438_73465538_73466295_73466402_73469516_73469651_73470344_73470484_73476867_73478570_73489193_73489392_73492799_73492922_73498496_73498699_73508326_73508472_73510735_73510853_73521826
transcript_179969.nic	chr7	-	2842	7	ISM	ENSG00000009954.11	ENST00000404251.1	5428	19	-27	35426	-12	-14527	5prime_fragment	FALSE	canonical	2	22	junction_4	5.33593686452737	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGAAGTTTGAGCCCCAA	-73522238	True	NA	16	True	AAAAAG	-4	NA	73522305	73476990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_73478570_73489193_73489392_73492799_73492922_73498496_73498699_73508326_73508472_73510735_73510853_73521826
transcript_179970.nic	chr7	-	3122	7	ISM	ENSG00000009954.11	ENST00000404251.1	5428	19	-376	35495	-361	-14596	5prime_fragment	FALSE	canonical	2	22	junction_4	5.33593686452737	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGGAAGCCAAAAATAAAGAA	NA	False	NA	34	True	AAGAAA	-40	NA	73522654	73477059	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_73478570_73489193_73489392_73492799_73492922_73498496_73498699_73508326_73508472_73510735_73510853_73521826
transcript_179971.nic	chr7	-	2048	7	ISM	ENSG00000009954.11	ENST00000404251.1	5428	19	-36	36229	-21	-15330	5prime_fragment	FALSE	canonical	2	22	junction_4	5.33593686452737	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGTTGAAGGAAAAAGCCA	-73522298	False	NA	33	True	AAAAAG	-21	NA	73522314	73477793	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_73478570_73489193_73489392_73492799_73492922_73498496_73498699_73508326_73508472_73510735_73510853_73521826
transcript_179972.nic	chr7	-	1043	5	ISM	ENSG00000009954.11	ENST00000404251.1	5428	19	-15	51245	0	-30346	5prime_fragment	FALSE	canonical	2	22	junction_2	5.24404424085076	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGATAAGGTTAGTTGAC	-73517440	True	NA	NA	False	NA	NA	NA	73522293	73492809	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_73492922_73498496_73498699_73508326_73508472_73510735_73510853_73521826
transcript_179973.known	chr7	-	6115	20	FSM	ENSG00000009954.11	ENST00000339594.9	6115	20	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_5	5.36429149736459	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTCTGGTGGCTGTTTGT	-73517440	True	NA	-9	True	AATAAA	-31	NA	73522293	73440405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73441694_73442180_73442554_73442724_73442829_73443983_73444130_73447263_73447380_73449541_73449690_73450846_73450995_73459535_73459719_73462921_73463100_73465438_73465538_73466295_73466402_73469516_73469651_73470344_73470484_73476867_73478570_73489193_73489392_73492799_73492922_73498496_73498699_73508326_73508472_73510735_73510853_73521826
transcript_179974.known	chr7	-	985	7	FSM	ENSG00000106635.8	ENST00000455335.2	985	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	137.154110401402	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCATCTTCCTGACCCTG	-73554861	True	NA	NA	False	GGGGCT	-4	NA	73557676	73537141	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73537391_73537933_73538014_73539881_73540053_73543547_73543645_73552166_73552243_73553547_73553670_73557486
transcript_179976.known	chr7	-	1638	6	FSM	ENSG00000106635.8	ENST00000482231.5	1638	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	114.688098772279	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATTTTTAAAATTAAACT	-73557133	False	NA	-42	True	NA	NA	NA	73557251	73536387	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73537391_73537933_73538014_73539881_73540053_73543547_73543645_73552166_73552243_73557040
transcript_179977.known	chr7	-	1663	6	FSM	ENSG00000106635.8	ENST00000223368.7	1663	6	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_5	48.9873453046805	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTGGTATCTGAGTGC	-73554875	True	NA	-10	True	ATTAAA	-15	NA	73557690	73536355	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73537391_73537933_73538014_73539881_73540053_73543547_73543645_73552166_73552243_73557486
transcript_179982.known	chr7	-	653	5	FSM	ENSG00000106635.8	ENST00000464288.5	653	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	154.206638962141	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTATTTATTGCATTCTGG	-73557123	False	NA	NA	False	NA	NA	NA	73557241	73537265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73537391_73537933_73538014_73539881_73540053_73552166_73552243_73557040
transcript_179983.known	chr7	-	887	5	FSM	ENSG00000106635.8	ENST00000454871.5	887	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	125.188607708529	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGAAGGCACCTTCTAGA	-73557491	False	NA	NA	False	NA	NA	NA	73557609	73536953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73537391_73537933_73538014_73539881_73540053_73552166_73552243_73557486
transcript_179984.known	chr7	-	1458	5	FSM	ENSG00000106635.8	ENST00000411832.5	1458	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	125.758449020334	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATTTGAAATATGTCCTG	-73554856	True	NA	-25	True	AATAGA	-17	NA	73557671	73536370	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73537391_73537933_73538014_73543547_73543645_73552166_73552243_73557486
transcript_179985.nnic	chr7	-	1462	4	NNC	ENSG00000106635.8	novel	1663	6	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	160.138134815609	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTGGTATCTGAGTGC	-73554879	True	NA	-10	True	ATTAAA	-15	NA	73557694	73536355	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_73537391_73537933_73538014_73539881_73540053_73557518
transcript_17999.known	chr1	+	319	2	FSM	ENSG00000230623.7	ENST00000635220.2	483	2	163	1	4	0	multi-exon	FALSE	canonical	3	307	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGCCCCATAATTGTA	200406600	True	NA	20	True	AATAAA	-22	NA	200411829	200415550	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_200411963_200415364
transcript_179990.known	chr7	-	1196	8	FSM	ENSG00000106638.18	ENST00000426966.5	1196	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	79.9479422461126	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGGCCGCTTTGAAGAGG	-73576252	True	NA	NA	False	AATACA	-29	NA	73578619	73570885	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73570973_73571188_73571342_73572843_73572971_73573319_73573472_73573937_73574123_73574382_73574514_73576540_73576702_73578419
transcript_179999.known	chr7	-	4344	7	FSM	ENSG00000106638.18	ENST00000305632.11	4344	7	0	0	0	0	multi-exon	TRUE	canonical	3	152	junction_5	17.7263144004111	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGGTGTATAGCCTATTT	-73576212	True	NA	NA	False	TTTAAA	-1	NA	73578579	73567536	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73570973_73571188_73571342_73572843_73572971_73573319_73573472_73573937_73574123_73574382_73574514_73578419
transcript_18.known	ERCC-00051	+	258	1	FSM	ERCC-00051A	DQ516740	258	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	258	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00051_+_0_300
transcript_180003.known	chr7	-	2358	7	FSM	ENSG00000106638.18	ENST00000459913.5	2358	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	64.4661840726507	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGTTTCTGCCATCAA	-73575902	False	NA	-7	True	AATAAA	-28	NA	73578269	73569659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73570973_73571188_73571342_73572843_73572971_73573319_73573472_73573937_73574123_73574382_73574514_73577972
transcript_180006.known	chr7	-	2209	7	FSM	ENSG00000106638.18	ENST00000450285.5	2209	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	64.0149722070288	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGTTTCTGCCATCAA	-73576223	True	NA	-7	True	AATAAA	-28	NA	73578590	73569659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73570973_73571188_73571342_73572843_73572971_73573319_73573472_73573960_73574123_73574382_73574514_73578419
transcript_180017.known	chr7	-	2165	8	NNC	ENSG00000106638.18	novel	1196	8	NA	NA	-6	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	63.1729081690135	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGACATGGTTTCTGCC	-73576193	True	NA	-12	True	AATAAA	-23	NA	73578560	73569664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_73570513_73570544_73570973_73571188_73571342_73572843_73572971_73573319_73573472_73573937_73574123_73574382_73574514_73578419
transcript_180018.known	chr7	-	3252	17	FSM	ENSG00000009950.16	ENST00000313375.8	3252	17	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_7	6.13360365119886	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTTTGTTGGTGTGCT	-73623420	True	NA	-11	True	AATAAA	-14	NA	73624522	73593201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73593984_73594273_73594404_73595636_73595761_73595841_73595970_73596152_73596273_73596363_73596480_73596638_73596790_73596864_73596933_73597181_73597714_73599525_73599696_73605687_73605769_73605909_73606112_73606973_73607019_73607330_73607421_73607589_73607673_73616070_73616178_73624199
transcript_180021.known	chr7	+	1618	4	FSM	ENSG00000176428.6	ENST00000324941.5	1618	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	6.34209919681348	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGCTGCCCGACTCCTCT	73667435	True	NA	26	True	AATAAA	-18	NA	73667830	73672110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_73668097_73669418_73669591_73670019_73670103_73671013
transcript_180025.known	chr7	+	1219	13	FSM	ENSG00000071462.12	ENST00000423497.5	1219	13	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_10	355.89725226063	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCTCTGGCATCTCCCA	73667844	True	NA	0	True	AATAAA	-12	NA	73683625	73698208	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_73683674_73683766_73683805_73686635_73686732_73686817_73686901_73686998_73687096_73690915_73691013_73692595_73692647_73693328_73693415_73693623_73693670_73693991_73694051_73697465_73697517_73697604_73697695_73697831
transcript_180028.known	chr7	+	1201	12	FSM	ENSG00000071462.12	ENST00000265758.7	1201	12	0	0	0	0	multi-exon	FALSE	canonical	3	904	junction_10	59.1651282149732	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGCATCTCCCAGCTC	73667815	True	NA	4	True	AATAAA	-16	NA	73683596	73698212	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_73683674_73683766_73683805_73686635_73686732_73686817_73686901_73686998_73687096_73690915_73691013_73692595_73692647_73693328_73693415_73693623_73693670_73693991_73694051_73697604_73697695_73697831
transcript_180034.nic	chr7	+	1349	12	NIC	ENSG00000071462.12	novel	1201	12	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_2	278.415647418159	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGCATCTCCCAGCTC	73667764	True	NA	4	True	AATAAA	-16	NA	73683545	73698212	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_73683674_73683766_73683902_73686635_73686732_73686817_73686901_73686998_73687096_73690915_73691013_73692595_73692647_73693328_73693415_73693623_73693670_73693991_73694051_73697604_73697695_73697831
transcript_180038.known	chr7	+	1260	12	FSM	ENSG00000071462.12	ENST00000430270.5	1260	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	283.48393339988	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCAACATAATGAAACTTC	73667844	True	NA	NA	False	NA	NA	NA	73683625	73698104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_73683674_73683766_73684001_73686635_73686732_73686817_73686901_73686998_73687096_73690915_73691013_73692595_73692647_73693328_73693415_73693623_73693670_73693991_73694051_73697604_73697695_73697831
transcript_180042.known	chr7	+	1815	11	FSM	ENSG00000071462.12	ENST00000463307.5	1815	11	0	0	0	0	multi-exon	FALSE	canonical	3	904	junction_9	60.2979269958761	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGAGAGCATCTTATTT	73667827	True	NA	-52	True	AATGAA	-38	NA	73683608	73698156	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_73683674_73683766_73683805_73686635_73686732_73686817_73686901_73686998_73687096_73690915_73691013_73692595_73693415_73693623_73693670_73693991_73694051_73697604_73697695_73697831
transcript_180056.nic	chr7	-	2252	10	NIC	ENSG00000106089.12	novel	2102	10	NA	NA	-56	0	combination_of_known_junctions	TRUE	canonical	3	29	junction_9	6.71831842570265	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCCTCTGTTGTAGATT	-73719125	False	NA	-5	True	AATAAA	-15	NA	73719728	73699209	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_73700485_73700729_73700932_73702844_73702983_73703754_73703829_73704147_73704257_73704349_73704424_73705149_73705225_73708588_73708689_73709044_73709123_73719601
transcript_180074.known	chr7	-	2536	1	FSM	ENSG00000176410.8	ENST00000395176.3	2536	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGGGAAACCA	-73682604	True	NA	NA	False	NA	NA	NA	73683453	73680917	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73680900_73683500
transcript_180079.known	chr7	-	1418	6	FSM	ENSG00000106077.19	ENST00000222800.8	1418	6	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_3	21.5276566304835	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGGGCTGAGGTCTGTG	-73735752	True	NA	-7	True	AATAAA	-16	NA	73738802	73736093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73736692_73736928_73737111_73737220_73737392_73737561_73737736_73738327_73738464_73738645
transcript_180082.known	chr7	-	1447	6	FSM	ENSG00000106077.19	ENST00000437775.7	1447	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	55.8762919313728	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGGGCTGAGGTCTGTG	-73735802	True	NA	-7	True	AATAAA	-16	NA	73738852	73736093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73736692_73736928_73737111_73737220_73737392_73737561_73737736_73738327_73738443_73738645
transcript_180085.known	chr7	-	1277	5	FSM	ENSG00000106077.19	ENST00000395147.9	1277	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	50.9362346468602	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGGGCTGAGGTCTGTG	-73735782	True	NA	-7	True	AATAAA	-16	NA	73738832	73736093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73736692_73736928_73737111_73737561_73737736_73738327_73738464_73738645
transcript_180097.known	chr7	-	890	4	FSM	ENSG00000106077.19	ENST00000458339.6	890	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	65.2703778311588	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCCTAGGCAACAGAGCA	-73735773	True	NA	NA	False	NA	NA	NA	73738823	73736289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73736692_73737561_73737736_73738327_73738464_73738645
transcript_180105.nic	chr7	-	2016	3	NIC	ENSG00000106077.19	novel	1277	5	NA	NA	-31	0	intron_retention	FALSE	canonical	3	144	junction_1	15	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGGGCTGAGGTCTGTG	-73735833	True	NA	-7	True	AATAAA	-16	NA	73738883	73736093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_73737736_73738327_73738464_73738645
transcript_180109.nic	chr7	-	1703	3	NIC	ENSG00000106077.19	novel	623	4	NA	NA	-31	-117	intron_retention	FALSE	canonical	3	144	junction_1	15	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCCTGGCGTGGTGGTGC	-73735833	True	NA	-10	True	AATACA	-5	NA	73738883	73736406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_73737736_73738327_73738464_73738645
transcript_18011.nic	chr1	-	2994	3	NIC	ENSG00000162702.8	novel	2933	3	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	53	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGACAAAAAAAA	-200404973	True	NA	63	True	TTTAAA	-4	NA	200410057	200406729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_200409453_200409560_200409720_200409945
transcript_180111.known	chr7	-	1463	6	FSM	ENSG00000106077.19	ENST00000357419.9	1463	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	60.8322283004659	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGGGCTGAGGTCTGTG	-73735802	True	NA	-7	True	AATAAA	-16	NA	73738852	73736093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73736692_73736928_73737111_73737220_73737392_73737561_73737736_73738332_73738464_73738645
transcript_180112.known	chr7	-	1274	1	FSM	ENSG00000165215.6	ENST00000395145.3	1274	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGCTGGAGCCTCCTTGTT	-73768382	True	NA	-8	True	AATAAA	-17	NA	73770270	73768996	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73769000_73770300
transcript_180114.known	chr7	+	1695	1	FSM	ENSG00000189143.10	ENST00000340958.4	1695	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	269	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGTCTCTGATTTCA	73827393	True	NA	24	True	AATAAA	-24	NA	73830995	73832690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_73831000_73832700
transcript_180115.known	chr7	+	4108	2	FSM	ENSG00000189143.10	ENST00000431918.1	4108	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAAATTTTATTGTCTCT	73828091	True	NA	17	True	AATAAA	-17	NA	73828173	73832683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_73828198_73828599
transcript_180117.known	chr7	-	922	6	FSM	ENSG00000165171.11	ENST00000297873.9	922	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	3.13687742827162	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGGCATCTGTTCCTGTG	-73842240	True	NA	-5	True	ATTAAA	-16	NA	73842516	73834589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73835003_73840030_73840121_73840413_73840550_73841069_73841199_73842017_73842145_73842489
transcript_180119.known	chr7	-	539	5	FSM	ENSG00000165171.11	ENST00000458679.5	539	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3.41869858279434	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGGATGTGGGAAGGCC	-73842240	True	NA	NA	False	AATACA	-38	NA	73842516	73834914	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_73835081_73840030_73840121_73841069_73841199_73842017_73842145_73842489
transcript_18012.known	chr1	-	2933	3	FSM	ENSG00000162702.8	ENST00000367352.3	2933	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	70.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGACAAAAAAAA	-200404908	True	NA	63	True	TTTAAA	-4	NA	200409992	200406729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_200409453_200409560_200409724_200409945
transcript_180121.known	chr7	+	2583	32	FSM	ENSG00000049540.19	ENST00000445912.5	2583	32	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_15	3.90549121142237	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTTTGTAACCCCATC	NA	False	NA	NA	False	NA	NA	NA	74027788	74068763	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_74028270_74035363_74035415_74036554_74036585_74037706_74037740_74041215_74041252_74042613_74042707_74042983_74043035_74043117_74043169_74043878_74043921_74045221_74045294_74046187_74046218_74046695_74046768_74047674_74047717_74048141_74048202_74048502_74048557_74051749_74051840_74051923_74051984_74053162_74053310_74054715_74054770_74056270_74056436_74056671_74056714_74057639_74057697_74059885_74060048_74060139_74060185_74060375_74060502_74061100_74061140_74063152_74063225_74063309_74063370_74063620_74063696_74065693_74065733_74066731_74066777_74068656
transcript_180127.nnic	chr7	+	3328	17	NNC	ENSG00000106683.15	novel	3355	16	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.165235738359	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCTGCGTGGCGATGTGT	74077888	True	NA	18	True	AATAAA	-24	NA	74083760	74122525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_74083885_74083954_74084046_74085747_74085845_74096621_74096761_74097079_74097190_74099031_74099239_74105874_74105981_74106076_74106244_74107009_74107194_74107870_74107958_74108904_74109037_74111647_74111708_74111932_74111999_74115801_74115959_74120582_74120639_74120891_74121050_74121138
transcript_180128.nnic	chr7	+	3327	17	NNC	ENSG00000106683.15	novel	3355	16	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.165235738359	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCTGCGTGGCGATGTGT	74077889	True	NA	18	True	AATAAA	-24	NA	74083761	74122525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_74083868_74083937_74084046_74085747_74085845_74096621_74096761_74097079_74097190_74099031_74099239_74105874_74105981_74106076_74106244_74107009_74107194_74107870_74107958_74108904_74109037_74111647_74111708_74111932_74111999_74115801_74115959_74120582_74120639_74120891_74121050_74121138
transcript_18013.known	chr1	-	4891	2	FSM	ENSG00000162702.8	ENST00000294740.3	4891	2	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	0	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGATATTACTTAATATCC	-200404972	True	NA	-20	True	AATAAA	-29	NA	200410056	200404939	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_200409720_200409945
transcript_180133.known	chr7	+	2170	15	FSM	ENSG00000106683.15	ENST00000538333.3	2170	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.9445787600907	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTTCTCTCTGCCGTG	74093045	False	NA	NA	False	NA	NA	NA	74093078	74121458	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_74093300_74096621_74096761_74097079_74097190_74099031_74099239_74105874_74105981_74106076_74106244_74107009_74107194_74107870_74107958_74108904_74109037_74111647_74111708_74111932_74111999_74115801_74115959_74120582_74120639_74120891_74121050_74121138
transcript_18014.known	chr1	-	4864	2	FSM	ENSG00000162702.8	ENST00000367353.2	4864	2	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_1	0	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTGAAGAAAGGAGATATT	-200404952	True	NA	-31	True	AATAAA	-18	NA	200410036	200404950	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_200409724_200409945
transcript_180141.known	chr7	+	2563	7	FSM	ENSG00000106682.16	ENST00000265753.13	2563	7	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_4	1552.64065385394	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATGCTTGCCTTTATTT	74107079	True	NA	NA	False	AATAAA	-19	NA	74174355	74197096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_74174443_74187610_74187799_74189672_74189738_74189821_74189919_74190246_74190307_74194740_74194879_74195168
transcript_180145.known	chr7	+	2503	6	FSM	ENSG00000106682.16	ENST00000353999.6	2503	6	0	0	0	0	multi-exon	FALSE	canonical	3	3199	junction_1	339.923167789429	3919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATGCTTGCCTTTATTT	74107079	True	NA	NA	False	AATAAA	-19	NA	74174355	74197096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_74174443_74187610_74187799_74189672_74189738_74189821_74189919_74194740_74194879_74195168
transcript_180151.known	chr7	+	2312	5	FSM	ENSG00000106682.16	ENST00000677570.1	2312	5	0	0	0	0	multi-exon	TRUE	canonical	3	92	junction_1	1570.72871225428	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTAATGCTTGCCTTTA	74107079	True	NA	NA	False	AATAAA	-16	NA	74174355	74197093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_74174443_74189672_74189738_74189821_74189919_74194740_74194879_74195168
transcript_180153.known	chr7	+	2776	5	FSM	ENSG00000106682.16	ENST00000495187.2	2776	5	0	0	0	0	multi-exon	FALSE	canonical	3	3199	junction_1	372.94537133473	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAACCTTACGTAATA	74107076	True	NA	NA	False	AGTAAA	-39	NA	74174352	74197076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_74174443_74187610_74187799_74189672_74189738_74189821_74189919_74194740
transcript_180155.known	chr7	-	1685	11	FSM	ENSG00000049541.11	ENST00000055077.8	1685	11	0	0	0	0	multi-exon	FALSE	canonical	3	1016	junction_5	112.176869273483	839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGTGACCATGTGAAGCC	-74243111	True	NA	-25	True	AATAAA	-23	NA	74254399	74231501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_74232217_74235531_74235646_74237361_74237443_74238922_74238989_74239937_74240096_74243145_74243247_74246661_74246764_74249011_74249119_74249738_74249781_74252428_74252499_74254270
transcript_18016.known	chr1	-	7291	30	FSM	ENSG00000118193.12	ENST00000367350.5	7291	30	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_20	15.5422786515913	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTCGTGGTCTATGCTT	-200617121	True	NA	-4	True	AATAAA	-18	NA	200620751	200551499	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_200553768_200554467_200554607_200555379_200555455_200559329_200559453_200560721_200560881_200565068_200565254_200565444_200565670_200569910_200570006_200575590_200575692_200580253_200580384_200581200_200581295_200586100_200586228_200589216_200589370_200590124_200590273_200592079_200592241_200593666_200593770_200598236_200598422_200600049_200600114_200600355_200600504_200601895_200602069_200603225_200603342_200603838_200603956_200605282_200605391_200605863_200605895_200606745_200606799_200608829_200608929_200614317_200614406_200615354_200615610_200617611_200618839_200620410
transcript_180167.known	chr7	-	1635	10	FSM	ENSG00000049541.11	ENST00000621097.4	1635	10	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_7	362.554142401986	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGGTGACCATGTGAAG	-74243170	True	NA	-27	True	AATAAA	-21	NA	74254458	74231503	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_74232217_74235531_74235646_74237361_74237443_74238922_74238989_74239937_74240096_74243145_74243247_74246661_74246764_74249738_74249781_74252428_74252499_74254270
transcript_180169.known	chr7	-	1576	10	FSM	ENSG00000049541.11	ENST00000352131.7	1576	10	0	0	0	0	multi-exon	TRUE	canonical	3	148	junction_6	335.630418433398	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGACCATGTGAAGCCTCG	-74243101	True	NA	-22	True	AATAAA	-26	NA	74254389	74231498	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_74232217_74235531_74235646_74237361_74237443_74238922_74238989_74239937_74240096_74243145_74243247_74249011_74249119_74249738_74249781_74252428_74252499_74254270
transcript_18018.nic	chr1	-	3458	18	ISM	ENSG00000118193.12	ENST00000367350.5	7291	30	-16	37845	-16	-37845	5prime_fragment	FALSE	canonical	3	74	junction_8	13.9616379998959	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCAGGAAATAAATAACCAG	-200617137	True	NA	-32	True	TTTAAA	-27	NA	200620767	200589344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_200589370_200590124_200590273_200592079_200592241_200593666_200593770_200598236_200598422_200600049_200600114_200600355_200600504_200601895_200602069_200603225_200603342_200603838_200603956_200605282_200605391_200605863_200605895_200606745_200606799_200608829_200608929_200614317_200614406_200615354_200615610_200617611_200618839_200620410
transcript_180189.known	chr7	-	1029	2	FSM	ENSG00000287815.2	ENST00000661689.2	1050	2	21	0	21	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGAGAGACCTTGTCTCA	-74289246	True	NA	NA	False	NA	NA	NA	74289286	74280746	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_74281551_74289061
transcript_180190.known	chr7	+	5623	17	FSM	ENSG00000106665.16	ENST00000223398.11	5623	17	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_8	48.9436857520968	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGGCAGTTGGCTTGTCT	74286236	True	NA	8	True	AATAAA	-20	NA	74289406	74405935	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_74289735_74317479_74317668_74338447_74339005_74353879_74354005_74356409_74356624_74357279_74357478_74360174_74360279_74364254_74364316_74372931_74373037_74375886_74376823_74380805_74380864_74386520_74386605_74389102_74389260_74397073_74397234_74400369_74400556_74401504_74401568_74403836
transcript_180196.known	chr7	+	5445	16	FSM	ENSG00000106665.16	ENST00000361545.9	5445	16	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_3	10.5556725139719	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGACCCCGGCAGTTGGCT	74286304	True	NA	3	True	AATAAA	-15	NA	74289474	74405930	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_74289735_74317479_74317668_74338447_74339005_74353879_74354005_74356409_74356624_74357279_74357478_74360174_74360279_74364254_74364316_74375886_74376823_74380805_74380864_74386520_74386605_74389102_74389260_74397073_74397234_74400369_74400556_74401504_74401568_74403836
transcript_1802.known	chr1	-	5295	21	FSM	ENSG00000116198.14	ENST00000674544.1	5295	21	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_19	20.4428471598259	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATACACACATATAC	-3853952	True	NA	NA	False	AATATA	-4	NA	3857194	3813030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3815518_3816279_3816371_3823173_3823242_3823423_3823563_3825757_3825867_3826369_3826437_3826707_3826745_3829265_3829374_3829790_3829998_3831045_3831223_3833861_3834036_3834924_3835093_3836494_3836693_3837291_3837520_3838963_3839120_3839607_3839777_3844906_3844984_3845288_3845352_3847474_3847614_3852294_3852422_3856888
transcript_18021.nic	chr1	-	2812	13	ISM	ENSG00000118193.12	ENST00000367350.5	7291	30	-16	48574	-16	-48574	5prime_fragment	FALSE	canonical	3	74	junction_3	14.9969904388255	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTCAAGAAACAAAAGAGTT	-200617137	True	NA	NA	False	AAAAAG	-5	NA	200620767	200600073	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_200600114_200600355_200600504_200601895_200602069_200603225_200603342_200603838_200603956_200605282_200605391_200605863_200605895_200606745_200606799_200608829_200608929_200614317_200614406_200615354_200615610_200617611_200618839_200620410
transcript_180217.known	chr7	+	3430	27	FSM	ENSG00000006704.11	ENST00000265755.7	3430	27	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_18	21.1436338985963	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAAAAAGAGTG	74453769	False	NA	NA	False	AGTAAA	-5	NA	74453789	74602590	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_74454177_74508074_74508204_74512829_74512972_74515440_74515597_74518138_74518323_74519408_74519720_74521207_74521298_74524070_74524155_74529733_74529918_74535112_74535139_74536166_74536276_74538135_74538174_74538679_74538761_74539878_74539969_74544754_74544803_74545743_74545810_74547102_74547287_74555173_74555224_74555392_74555495_74557638_74557723_74558860_74559045_74559626_74559656_74589850_74589929_74590824_74591018_74595013_74595052_74601043_74601181_74602364
transcript_180218.known	chr7	+	3284	27	FSM	ENSG00000006704.11	ENST00000424337.7	3284	27	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	19.2623202716734	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTTGCCTTTACTTTTA	74452519	True	NA	NA	False	AGTAAA	-20	NA	74453905	74602605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_74454177_74508074_74508204_74512829_74512972_74515440_74515597_74518138_74518323_74519408_74519720_74521207_74521298_74524070_74524155_74529733_74529918_74535112_74535139_74536166_74536276_74538135_74538174_74538679_74538761_74539878_74539969_74544754_74544803_74545743_74545810_74547102_74547287_74555173_74555224_74555437_74555495_74557638_74557723_74558860_74559045_74559626_74559656_74589850_74589929_74590824_74591018_74595013_74595052_74601043_74601181_74602364
transcript_180229.nic	chr7	+	3313	26	NIC	ENSG00000006704.11	novel	3284	27	NA	NA	30	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_18	25.9163577687915	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTTGCCTTTACTTTTA	74453799	False	NA	NA	False	AGTAAA	-20	NA	74453819	74602605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_74454177_74508074_74508204_74512829_74512972_74515440_74515597_74518138_74518323_74519408_74519720_74521207_74521298_74524070_74524155_74529733_74529918_74535112_74535139_74536166_74536276_74538135_74538174_74538679_74538761_74539878_74539969_74544754_74544803_74545743_74545810_74547102_74547287_74555173_74555224_74557638_74557723_74558860_74559045_74559626_74559656_74589850_74589929_74590824_74591018_74595013_74595052_74601043_74601181_74602364
transcript_180234.nnic	chr7	+	3214	26	NIC	ENSG00000006704.11	novel	3284	27	NA	NA	30	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	26.7128733010884	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTTGCCTTTACTTTTA	74453799	False	NA	NA	False	AGTAAA	-20	NA	74453819	74602605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_74454177_74508074_74508204_74512829_74512972_74518138_74518323_74519408_74519720_74521207_74521298_74524070_74524155_74529733_74529918_74535112_74535139_74536166_74536276_74538135_74538174_74538679_74538761_74539878_74539969_74544754_74544803_74545743_74545810_74547102_74547287_74555173_74555224_74555437_74555495_74557638_74557723_74558860_74559045_74559626_74559656_74589850_74589929_74590824_74591018_74595013_74595052_74601043_74601181_74602364
transcript_180242.known	chr7	+	4515	35	FSM	ENSG00000263001.8	ENST00000573035.6	4515	35	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_9	508.140218673852	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATTGCTCTCTCGGCTGT	74646479	True	NA	NA	False	AATAAA	-27	NA	74657717	74760692	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_74658069_74689123_74689228_74690972_74691112_74698960_74699096_74700246_74700431_74700605_74700635_74705163_74705219_74706389_74706434_74711031_74711110_74714856_74714917_74716893_74716951_74718878_74718942_74728785_74728897_74730228_74730295_74732478_74732663_74733922_74733982_74735460_74735533_74736499_74736684_74738044_74738104_74743448_74743521_74744757_74744942_74745882_74745942_74746336_74746412_74748014_74748117_74749024_74749091_74749267_74749452_74751360_74751417_74752089_74752171_74753093_74753178_74753845_74754030_74755508_74755538_74756819_74756862_74757958_74758001_74758779_74758856_74759547
transcript_180251.known	chr7	+	4412	34	FSM	ENSG00000263001.8	ENST00000621734.4	4412	34	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_9	487.6673002939	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATTGCTCTCTCGGCTGT	74646519	True	NA	NA	False	AATAAA	-27	NA	74657757	74760692	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_74658069_74689123_74689228_74690972_74691112_74698960_74699096_74700246_74700431_74700605_74700635_74705163_74705219_74706389_74706434_74711031_74711110_74714856_74714917_74716893_74716951_74728785_74728897_74730228_74730295_74732478_74732663_74733922_74733982_74735460_74735533_74736499_74736684_74738044_74738104_74743448_74743521_74744757_74744942_74745882_74745942_74746336_74746412_74748014_74748117_74749024_74749091_74749267_74749452_74751360_74751417_74752089_74752171_74753093_74753178_74753845_74754030_74755508_74755538_74756819_74756862_74757958_74758001_74758779_74758856_74759547
transcript_180255.known	chr7	+	4415	34	FSM	ENSG00000263001.8	ENST00000614986.4	4415	34	0	0	0	0	multi-exon	FALSE	canonical	3	679	junction_10	366.506148185107	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATTGCTCTCTCGGCTGT	74646519	True	NA	NA	False	AATAAA	-27	NA	74657757	74760692	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_74658069_74689123_74689228_74690972_74691112_74698960_74699096_74700246_74700431_74700605_74700635_74705163_74705219_74706389_74706434_74711031_74711110_74716893_74716951_74718878_74718942_74728785_74728897_74730228_74730295_74732478_74732663_74733922_74733982_74735460_74735533_74736499_74736684_74738044_74738104_74743448_74743521_74744757_74744942_74745882_74745942_74746336_74746412_74748014_74748117_74749024_74749091_74749267_74749452_74751360_74751417_74752089_74752171_74753093_74753178_74753845_74754030_74755508_74755538_74756819_74756862_74757958_74758001_74758779_74758856_74759547
transcript_180278.known	chr7	+	4352	33	FSM	ENSG00000263001.8	ENST00000620879.4	4352	33	0	0	0	0	multi-exon	FALSE	canonical	3	807	junction_10	322.900599062622	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATTGCTCTCTCGGCTGT	74646519	True	NA	NA	False	AATAAA	-27	NA	74657757	74760692	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_74658069_74689123_74689228_74690972_74691112_74698960_74699096_74700246_74700431_74700605_74700635_74705163_74705219_74706389_74706434_74711031_74711110_74716893_74716951_74728785_74728897_74730228_74730295_74732478_74732663_74733922_74733982_74735460_74735533_74736499_74736684_74738044_74738104_74743448_74743521_74744757_74744942_74745882_74745942_74746336_74746412_74748014_74748117_74749024_74749091_74749267_74749452_74751360_74751417_74752089_74752171_74753093_74753178_74753845_74754030_74755508_74755538_74756819_74756862_74757958_74758001_74758779_74758856_74759547
transcript_18029.nic	chr1	-	2277	8	NIC	ENSG00000118197.14	novel	945	4	NA	NA	-94	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	26.4829556276393	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTTGAAAAATTTGCACAT	-200668437	True	NA	-21	True	AATAAA	-6	NA	200670001	200640821	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_200641257_200648438_200648568_200649073_200649227_200650424_200650677_200659026_200659117_200663918_200664087_200665936_200666752_200669766
transcript_1803.known	chr1	-	6233	21	FSM	ENSG00000116198.14	ENST00000675677.1	6233	21	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_12	21.0354462752755	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGTCACTTTATTTCA	-3853969	True	NA	NA	False	AATAAA	-13	NA	3857211	3812085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3815518_3816279_3816371_3823173_3823242_3823423_3823563_3825757_3825867_3826369_3826437_3826707_3826745_3829265_3829374_3829790_3829998_3831045_3831223_3833861_3834036_3834924_3835093_3837291_3837520_3838963_3839120_3839607_3839777_3844906_3844984_3845288_3845352_3847474_3847614_3848607_3848782_3852294_3852422_3856888
transcript_18032.known	chr1	-	2229	8	FSM	ENSG00000118197.14	ENST00000331314.11	2229	8	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_4	10.5810766783664	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTTTCTTTTTTCTTTT	-200668343	True	NA	NA	False	AATAAA	-23	NA	200669907	200644036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_200644518_200648438_200648568_200649073_200649227_200650424_200650677_200659026_200659117_200663918_200664087_200665936_200666752_200669766
transcript_180322.known	chr7	+	979	10	FSM	ENSG00000263001.8	ENST00000443166.5	979	10	0	0	0	0	multi-exon	FALSE	canonical	3	1261	junction_9	84.0627337758923	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTTCCTAGCCAACAGGT	74658008	False	NA	NA	False	AATAAA	-18	NA	74658030	74717066	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_74658069_74689123_74689228_74690972_74691112_74698960_74699096_74700246_74700431_74700605_74700635_74705163_74705219_74706389_74706434_74711031_74711110_74716893
transcript_180328.known	chr7	+	4730	35	FSM	ENSG00000263001.8	ENST00000650807.1	4730	35	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_1	569.859599202091	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATTGCTCTCTCGGCTGT	74650211	True	NA	NA	False	AATAAA	-27	NA	74650230	74760692	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_74650797_74689123_74689228_74690972_74691112_74698960_74699096_74700246_74700431_74700605_74700635_74705163_74705219_74706389_74706434_74711031_74711110_74714856_74714917_74716893_74716951_74718878_74718942_74728785_74728897_74730228_74730295_74732478_74732663_74733922_74733982_74735460_74735533_74736499_74736684_74738044_74738104_74743448_74743521_74744757_74744942_74745882_74745942_74746336_74746412_74748014_74748117_74749024_74749091_74749267_74749452_74751360_74751417_74752089_74752171_74753093_74753178_74753845_74754030_74755508_74755538_74756819_74756862_74757958_74758001_74758779_74758856_74759547
transcript_180329.nic	chr7	+	644	3	ISM	ENSG00000263001.8	ENST00000443166.5	979	10	-361	25953	3	5	5prime_fragment	FALSE	canonical	3	1351	junction_1	97.5	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATTGTATTTTTATCTT	74657599	False	NA	NA	False	AAAAAG	-18	NA	74657669	74691113	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_74658069_74689123_74689228_74690972
transcript_180331.known	chr7	+	865	2	FSM	ENSG00000263001.8	ENST00000652150.1	865	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCATCTAATATTTATATA	74650211	True	NA	NA	False	ATTAAA	-23	NA	74650230	74651491	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_74650797_74651192
transcript_180332.known	chr7	+	538	2	FSM	ENSG00000263001.8	ENST00000613513.1	538	2	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTAAGCATTGTATTTTT	74657596	False	NA	NA	False	AAAAAG	-13	NA	74657666	74691108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_74658069_74690972
transcript_180333.known	chr7	-	3605	16	FSM	ENSG00000196275.16	ENST00000451013.7	3605	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	68.9867620151383	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTATTATTGGTAGTTG	-74851149	True	NA	NA	False	ATTAAA	-15	NA	74851605	74796150	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_74798266_74801984_74802014_74803297_74803482_74804776_74804861_74806933_74807012_74809107_74809174_74810895_74810953_74812738_74812817_74819553_74819598_74819968_74820024_74822426_74822456_74822623_74822808_74824932_74825053_74832804_74832944_74836279_74836384_74851366
transcript_180337.known	chr7	-	2130	8	FSM	ENSG00000277072.5	ENST00000426587.5	2130	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	12.8555554575619	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTGGAAGCCCCATTGT	NA	False	NA	-25	True	AGTAAA	-16	NA	74890610	74882162	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_74883464_74883727_74883836_74884143_74884224_74884433_74884525_74885022_74885147_74887682_74887800_74888311_74888398_74890387
transcript_180343.known	chr7	-	1047	5	FSM	ENSG00000277072.5	ENST00000611766.4	1047	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	13.8089644796415	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCTGGCCTCTGCTGTGG	-74888274	True	NA	NA	False	NA	NA	NA	74890566	74883766	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_74884224_74884433_74884525_74887682_74887800_74888311_74888398_74890270
transcript_180347.known	chr7	-	578	3	FSM	ENSG00000196275.16	ENST00000614386.1	578	3	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_2	38.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGGTCATTTTATTTTA	-74851073	True	NA	NA	False	AATAAA	-28	NA	74851529	74832632	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_74832944_74836279_74836384_74851366
transcript_180355.nnic	chr7	-	2585	11	NNC	ENSG00000274523.5	novel	2309	11	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_10	100.778023397961	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTGAAGAGATCTTCTTA	-75069538	True	NA	-26	True	AATAAA	-28	NA	75073844	75042182	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_75043110_75052710_75052797_75055900_75056075_75057528_75057617_75058587_75058770_75061206_75061292_75063291_75063344_75064581_75064649_75066663_75066793_75070639_75070770_75073179
transcript_180356.known	chr7	-	2309	11	FSM	ENSG00000274523.5	ENST00000610322.5	2309	11	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_2	14.2481577756565	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTGAAGAGATCTTCTTA	-75069496	True	NA	-26	True	AATAAA	-28	NA	75073802	75042182	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_75043110_75052710_75052797_75055900_75056075_75057528_75057617_75058587_75058770_75061206_75061292_75063291_75063344_75064581_75064649_75066663_75066793_75070639_75070770_75073413
transcript_180360.known	chr7	+	8100	9	FSM	ENSG00000274070.2	ENST00000616305.2	8100	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	7.70957197255464	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGATGCTGGCTGGTGGCCGT	NA	False	NA	22	True	ATTAAA	-15	NA	74964704	75031528	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_74965099_75007993_75008065_75017597_75017792_75017989_75018123_75018971_75019096_75020038_75020150_75021873_75021957_75024439_75024535_75024633
transcript_180363.known	chr7	-	1610	9	FSM	ENSG00000274523.5	ENST00000616051.1	1610	9	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_1	12.3970762682174	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGGATCCATGGGTGGGTG	-75069484	True	NA	NA	False	NA	NA	NA	75073790	75055574	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_75056075_75057528_75057617_75058587_75058770_75061206_75061292_75063291_75063344_75064581_75064649_75066663_75066793_75070639_75070770_75073413
transcript_180368.known	chr7	+	3551	16	FSM	ENSG00000174428.19	ENST00000472837.7	3551	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_15	79.621493468926	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGGTAGTTGACTTTTC	75090618	True	NA	NA	False	ATTAAA	-22	NA	75092589	75149817	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_75092766_75108959_75109064_75112396_75112536_75120890_75121011_75123135_75123320_75123487_75123517_75125915_75125971_75126341_75126386_75133134_75133213_75135000_75135058_75136784_75136851_75138949_75139028_75141102_75141187_75142481_75142666_75143949_75143979_75147693
transcript_180375.known	chr7	+	573	3	FSM	ENSG00000174428.19	ENST00000614064.4	573	3	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_1	25.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCAAGACAAATGGTCATT	75090628	True	NA	9	True	AATAAA	-20	NA	75092599	75112699	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_75092766_75108959_75109064_75112396
transcript_18038.nic	chr1	-	1480	5	ISM	ENSG00000118197.14	ENST00000331314.11	2229	8	-32	6406	-32	0	5prime_fragment	FALSE	canonical	3	59	junction_1	10.8943792847505	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTGAAATTTTAAATGT	-200668375	True	NA	NA	False	AAAAAG	-7	NA	200669939	200650442	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_200650677_200659026_200659117_200663918_200664087_200665936_200666752_200669766
transcript_180383.known	chr7	-	5867	15	FSM	ENSG00000272391.6	ENST00000615331.5	5867	15	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_14	52.7587888026096	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTACGTTCTGCATTTTAT	-75483807	True	NA	NA	False	AATAAA	-19	NA	75486299	75416785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_75418894_75419319_75419443_75421508_75423204_75424048_75424226_75424525_75424629_75425073_75425196_75425634_75425709_75426361_75426454_75437514_75437687_75439143_75439225_75440953_75441116_75441431_75441648_75474703_75474883_75475061_75475189_75485863
transcript_18039.known	chr1	+	4498	17	FSM	ENSG00000118200.15	ENST00000413307.6	4498	17	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_8	15.8556722894364	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAGAAAATCTTTCTAATT	200739762	False	NA	NA	False	NA	NA	NA	200739778	200858119	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_200739967_200760838_200761099_200807375_200807538_200815560_200815645_200832199_200832342_200832705_200832846_200841993_200842088_200844781_200844870_200847257_200847293_200847639_200847710_200848031_200850235_200852540_200852678_200853274_200853496_200854816_200854890_200856009_200856126_200857305_200857425_200857753
transcript_18041.nic	chr1	+	3045	11	ISM	ENSG00000118200.15	ENST00000358823.7	8017	17	0	11825	0	-4536	5prime_fragment	FALSE	canonical	3	48	junction_8	8.89325587172662	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTGGAAGCAGTTCTCAA	200737243	True	NA	NA	False	NA	NA	NA	200738892	200848879	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_200739967_200760838_200761099_200807375_200807538_200815560_200815645_200832199_200832342_200832705_200832846_200841993_200842088_200844781_200844870_200847209_200847293_200847639_200847710_200848031
transcript_18043.nic	chr1	+	3397	11	ISM	ENSG00000118200.15	ENST00000358823.7	8017	17	0	11473	0	-4184	5prime_fragment	FALSE	canonical	3	48	junction_8	8.89325587172662	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAATCACAAAAAACTGATG	200737243	True	NA	NA	False	AAGAAA	-2	NA	200738892	200849231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_200739967_200760838_200761099_200807375_200807538_200815560_200815645_200832199_200832342_200832705_200832846_200841993_200842088_200844781_200844870_200847209_200847293_200847639_200847710_200848031
transcript_180448.nic	chr7	+	2910	9	NIC	ENSG00000223705.10	novel	1535	11	NA	NA	-28	0	intron_retention	FALSE	canonical	3	21	junction_4	139.460063727936	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATAGATCACAGTTTTTT	NA	False	NA	16	True	AATAAA	-17	NA	75410293	75416786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_75410461_75410605_75411575_75411654_75411760_75412788_75412933_75414639_75414799_75414884_75415024_75415119_75415235_75415591_75416192_75416274
transcript_180449.nic	chr7	+	2541	9	NIC	ENSG00000223705.10	novel	1535	11	NA	NA	-28	0	intron_retention	FALSE	canonical	3	102	junction_7	111.018861010191	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATAGATCACAGTTTTTT	NA	False	NA	16	True	AATAAA	-17	NA	75410293	75416786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_75410461_75410605_75411575_75411654_75411760_75412788_75412933_75414884_75415024_75415119_75415235_75415591_75415771_75415980_75416192_75416274
transcript_180453.nnic	chr7	+	2629	9	NIC	ENSG00000223705.10	novel	1535	11	NA	NA	-28	0	intron_retention	FALSE	canonical	3	35	junction_7	124.500439256253	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATAGATCACAGTTTTTT	NA	False	NA	16	True	AATAAA	-17	NA	75410293	75416786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_75410461_75410605_75411575_75411654_75411760_75412788_75412933_75414884_75415024_75415119_75415235_75415591_75415981_75416102_75416192_75416274
transcript_180464.known	chr7	+	1836	8	FSM	ENSG00000223705.10	ENST00000457988.5	1836	8	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	134.155255778748	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	75409574	True	NA	17	True	AATAAA	-18	NA	75410361	75416787	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_75410461_75410605_75410727_75411654_75411760_75412788_75412933_75414884_75415024_75415119_75415235_75415591_75416192_75416274
transcript_180474.nic	chr7	+	2751	8	NIC	ENSG00000223705.10	novel	1535	11	NA	NA	-28	0	intron_retention	FALSE	canonical	3	108	junction_4	99.4648948429668	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATAGATCACAGTTTTTT	NA	False	NA	16	True	AATAAA	-17	NA	75410293	75416786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_75410461_75410605_75411575_75411654_75411760_75412788_75412933_75414884_75415024_75415119_75415235_75415591_75416192_75416274
transcript_180497.nic	chr7	+	4703	7	NIC	ENSG00000223705.10	novel	1535	11	NA	NA	-28	0	intron_retention	FALSE	canonical	3	206	junction_2	73.7601217159757	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATAGATCACAGTTTTTT	NA	False	NA	16	True	AATAAA	-17	NA	75410293	75416786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_75410461_75410605_75411575_75411654_75411760_75412788_75415024_75415119_75415235_75415591_75416192_75416274
transcript_18050.nic	chr1	+	4355	10	NIC	ENSG00000163362.11	novel	4298	10	NA	NA	-63	0	intron_retention	TRUE	canonical	3	25	junction_1	45.1786576948797	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGGGATGAGGGATTTT	NA	False	NA	-2	True	AATAAA	-23	NA	200890984	200915735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_200891403_200898306_200898456_200899472_200899598_200900103_200900221_200900936_200901160_200907833_200907888_200908729_200908941_200909223_200909398_200911452_200912138_200913536
transcript_180512.nic	chr7	+	4783	6	NIC	ENSG00000223705.10	novel	1836	8	NA	NA	-28	0	intron_retention	FALSE	canonical	3	222	junction_2	60.7835504063394	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATAGATCACAGTTTTTT	NA	False	NA	16	True	AATAAA	-17	NA	75410293	75416786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_75410461_75410605_75411760_75412788_75415024_75415119_75415235_75415591_75416192_75416274
transcript_180514.nic	chr7	+	1299	6	FSM	ENSG00000223705.10	ENST00000689022.1	1269	6	-36	6	-4	0	multi-exon	FALSE	canonical	3	102	junction_4	124.798397425608	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATAGATCACAGTTTTTT	75409530	True	NA	16	True	AATAAA	-17	NA	75410317	75416786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_75410461_75414884_75415024_75415119_75415235_75415591_75415771_75415980_75416192_75416274
transcript_180516.nic	chr7	+	1307	6	FSM	ENSG00000223705.10	ENST00000691741.1	1283	6	-32	8	-4	0	multi-exon	FALSE	canonical	3	85	junction_4	129.378514445019	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATAGATCACAGTTTTTT	75409530	True	NA	16	True	AATAAA	-17	NA	75410317	75416786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_75410461_75414884_75415024_75415119_75415235_75415591_75415779_75415980_75416192_75416274
transcript_18052.nnic	chr1	+	4503	10	NIC	ENSG00000163362.11	novel	4298	10	NA	NA	3	0	intron_retention	FALSE	canonical	3	13	junction_1	48.8648931010575	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGGGATGAGGGATTTT	200890648	False	NA	-2	True	AATAAA	-23	NA	200891050	200915735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_200891702_200898391_200898456_200899472_200899598_200900103_200900221_200900936_200901160_200907833_200907888_200908729_200908941_200909223_200909398_200911452_200912138_200913536
transcript_18053.known	chr1	+	4298	10	FSM	ENSG00000163362.11	ENST00000367342.8	4298	10	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	15.8285567843864	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGGGATGAGGGATTTT	200890938	False	NA	-2	True	AATAAA	-23	NA	200891340	200915735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_200891702_200898306_200898456_200899472_200899598_200900103_200900221_200900936_200901160_200907833_200907888_200908729_200908941_200909223_200909398_200911452_200912138_200913536
transcript_180531.nnic	chr7	-	2607	9	NNC	ENSG00000127957.19	novel	637	7	NA	NA	-3	17338	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	13.1713467420761	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTACATTTGTCTTACTTG	-75526730	True	NA	NA	False	NA	NA	NA	75528135	75490408	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_75491624_75510930_75511115_75512308_75512422_75512588_75512676_75514644_75514785_75515717_75515829_75516093_75516221_75525904_75525964_75527564
transcript_180536.known	chr7	-	1490	9	FSM	ENSG00000127957.19	ENST00000418756.5	1490	9	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_5	11.0333301863037	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACCCAGTTTCTCATA	-75526718	True	NA	NA	False	ATTAAA	-15	NA	75528123	75507752	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_75507868_75510930_75511115_75512308_75512422_75512588_75512676_75514644_75514780_75515717_75515829_75516093_75516221_75525904_75525964_75527564
transcript_180537.known	chr7	-	1005	9	FSM	ENSG00000127957.19	ENST00000430602.5	1005	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	12.6484929932384	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTTTCTCATAGTT	-75527821	False	34	NA	False	ATTAAA	-18	NA	75527836	75507749	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_75507868_75510930_75511115_75512308_75512422_75512588_75512676_75514644_75514785_75515717_75515829_75516093_75516221_75525904_75525964_75527770
transcript_180544.nnic	chr7	-	2485	8	NNC	ENSG00000127957.19	novel	637	7	NA	NA	-3	17338	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_1	16.4614577676685	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTACATTTGTCTTACTTG	-75526721	True	NA	NA	False	NA	NA	NA	75528126	75490408	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_75491624_75510930_75511115_75512588_75512676_75514644_75514785_75515717_75515829_75516093_75516221_75525904_75525964_75527564
transcript_180551.known	chr7	-	8009	31	FSM	ENSG00000127946.17	ENST00000336926.11	8009	31	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_30	25.7592486087791	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCGTGGTGGTGATTGA	-75738399	True	NA	-3	True	AATAAA	-17	NA	75738941	75533297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_75538225_75539322_75539432_75541918_75541981_75542850_75542975_75544694_75544801_75545087_75545189_75546938_75547033_75547754_75547814_75548890_75549002_75553452_75553590_75554112_75554221_75554439_75554527_75555415_75555552_75556025_75556170_75556709_75556812_75557653_75557771_75558166_75558256_75559731_75559916_75561328_75561402_75562072_75562171_75562934_75563076_75563187_75563264_75568198_75568257_75573760_75573902_75581236_75581299_75582074_75582152_75586752_75586834_75592055_75592113_75592371_75592515_75599183_75599248_75738800
transcript_180554.nnic	chr7	-	5624	31	NNC	ENSG00000127946.17	novel	8009	31	NA	NA	-27544	-1791	at_least_one_novel_splicesite	FALSE	canonical	2	42	junction_29	20.9645467926741	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCGAGCGTAGTGACGG	-75639348	False	NA	NA	False	ACTAAA	-12	NA	75639387	75535878	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_75538225_75539322_75539432_75541918_75541981_75542850_75542975_75544694_75544801_75545087_75545189_75546938_75547033_75547754_75547814_75548890_75549002_75553452_75553590_75554112_75554221_75554439_75554527_75555415_75555552_75556025_75556170_75556709_75556812_75557653_75557771_75558166_75558256_75559731_75559916_75561328_75561402_75562072_75562171_75562934_75563076_75563187_75563264_75568198_75568257_75573760_75573902_75581236_75581299_75582074_75582152_75586752_75586834_75592055_75592113_75592371_75592515_75599183_75599248_75639050
transcript_180556.nnic	chr7	-	3371	31	NNC	ENSG00000127946.17	novel	8009	31	NA	NA	-27590	-95	at_least_one_novel_splicesite	FALSE	canonical	2	42	junction_29	20.9645467926741	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAGAGCCAAACCAACAC	-75639394	False	NA	-51	True	NA	NA	NA	75639433	75538177	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_75538225_75539322_75539432_75541918_75541981_75542850_75542975_75544694_75544801_75545087_75545189_75546938_75547033_75547754_75547814_75548890_75549002_75553452_75553590_75554112_75554221_75554439_75554527_75555415_75555552_75556025_75556170_75556709_75556812_75557653_75557771_75558166_75558256_75559731_75559916_75561328_75561402_75562072_75562171_75562934_75563076_75563187_75563264_75568198_75568257_75573760_75573902_75581236_75581299_75582074_75582152_75586752_75586834_75592055_75592113_75592371_75592515_75599183_75599248_75639050
transcript_180565.known	chr7	-	503	2	FSM	ENSG00000127946.17	ENST00000479835.1	503	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGCCTGCCCTCAAAAAAA	-75738420	True	NA	NA	False	NA	NA	NA	75738962	75733459	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_75733801_75738800
transcript_180567.nnic	chr7	-	650	4	NNC	ENSG00000006606.9	novel	703	4	NA	NA	1645	0	at_least_one_novel_splicesite	FALSE	canonical	3	174	junction_3	40.4502437844597	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGACTTGTTCATAACATT	-75787296	True	NA	-17	True	AATAAA	-14	NA	75788251	75769537	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_75769790_75771888_75772004_75772103_75772255_75788119
transcript_180568.nnic	chr7	-	696	4	NNC	ENSG00000006606.9	novel	703	4	NA	NA	1419	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_3	103.776469180424	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGACTTGTTCATAACATT	NA	False	NA	-17	True	AATAAA	-14	NA	75788477	75769537	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_75769790_75771888_75772004_75772103_75772255_75788299
transcript_180570.known	chr7	-	475	3	FSM	ENSG00000006606.9	ENST00000005180.9	475	3	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_2	15.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGACTTGTTCATAACATT	-75772090	True	NA	-17	True	AATAAA	-14	NA	75772211	75769537	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_75769790_75771888_75772004_75772103
transcript_180574.known	chr7	+	1831	5	FSM	ENSG00000005486.17	ENST00000454791.1	1831	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	116.112822289358	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGTCTGCCTTTGTAT	75875641	True	NA	-31	True	NA	NA	NA	75879003	75888884	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_75879261_75881364_75881487_75881828_75882237_75883697_75883849_75887991
transcript_180577.known	chr7	+	1721	4	FSM	ENSG00000005486.17	ENST00000006777.11	1721	4	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_3	10.0332779621949	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCTGGCGTGTGCTTCCT	75875671	True	NA	11	True	TATAAA	-20	NA	75879033	75888926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_75879261_75881828_75882237_75883697_75883849_75887991
transcript_180608.known	chr7	+	2446	16	FSM	ENSG00000127948.16	ENST00000461988.6	2446	16	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_1	57.3175947390212	2234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTGGTATTGTGTGAG	75903994	True	NA	26	True	AATAAA	-16	NA	75915154	75986855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_75915180_75953988_75954181_75972412_75972462_75979450_75979580_75980338_75980489_75981047_75981173_75981516_75981607_75982223_75982323_75983519_75983637_75983737_75983857_75984776_75984959_75985057_75985208_75985578_75985850_75985922_75986069_75986158_75986242_75986336
transcript_180615.known	chr7	+	2532	15	FSM	ENSG00000127948.16	ENST00000394893.5	2532	15	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_1	58.9690337276736	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTGGTATTGTGTGAG	75904003	True	NA	26	True	AATAAA	-16	NA	75915163	75986855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_75915180_75953988_75954181_75972412_75972462_75979450_75979580_75980338_75980489_75981047_75981173_75981516_75981607_75982223_75982323_75983519_75983637_75983737_75983857_75984776_75984959_75985057_75985208_75985578_75985850_75985922_75986069_75986158
transcript_18065.known	chr1	+	2497	2	FSM	ENSG00000229191.1	ENST00000446333.1	2497	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	201023639	True	NA	NA	False	NA	NA	NA	201023948	201027790	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_201024077_201025421
transcript_180651.known	chr7	-	1398	12	FSM	ENSG00000189077.11	ENST00000493111.7	1398	12	0	0	0	0	multi-exon	TRUE	canonical	3	210	junction_10	28.0748703845172	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCCAGAGGTTATTTAAAA	-75992954	True	NA	-32	True	AATACA	-22	NA	75994595	75986830	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_75987286_75987359_75987429_75987537_75987603_75987717_75987811_75987922_75987985_75988082_75988149_75988251_75988342_75988420_75988517_75989164_75989225_75992143_75992261_75992438_75992558_75994489
transcript_180652.known	chr7	-	1161	12	FSM	ENSG00000189077.11	ENST00000439537.5	1161	12	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	68.3105451486987	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGCGTGTGTGTTCTC	-75992933	True	NA	-3	True	AATAAA	-17	NA	75994574	75986984	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_75987224_75987359_75987429_75987537_75987603_75987717_75987811_75987922_75987985_75988082_75988149_75988251_75988342_75988420_75988517_75989164_75989225_75992143_75992261_75992438_75992558_75994489
transcript_180656.known	chr7	-	1352	11	FSM	ENSG00000189077.11	ENST00000440632.5	1352	11	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_9	27.7454500774451	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCCTGAAGGAAGACCTG	-75993015	True	NA	-59	True	NA	NA	NA	75994656	75987040	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_75987286_75987359_75987429_75987537_75987603_75987717_75987811_75987922_75987985_75988082_75988342_75988420_75988517_75989164_75989225_75992143_75992261_75992438_75992558_75994489
transcript_18066.known	chr1	+	3496	2	FSM	ENSG00000229191.1	ENST00000458003.1	3496	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAACTTACAAGTTGTGTG	201023651	True	NA	8	True	AATAAA	-18	NA	201023960	201028792	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_201024086_201025421
transcript_180665.known	chr7	+	1028	4	FSM	ENSG00000127948.16	ENST00000493973.1	1028	4	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_3	20.2703943940144	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTGGTATTGTGTGAG	75985543	False	NA	26	True	AATAAA	-16	NA	75985569	75986855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_75985850_75985922_75986069_75986158_75986242_75986336
transcript_180673.known	chr7	-	1411	9	FSM	ENSG00000127952.17	ENST00000359697.8	1411	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	60.506068910482	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGCCTCCTGTACTGAT	-76045784	True	NA	-14	True	NA	NA	NA	76048000	75996341	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_75996600_76000889_76001003_76003757_76003856_76005258_76005405_76013741_76013888_76021850_76021993_76028641_76028704_76030420_76030528_76047661
transcript_180674.known	chr7	-	1147	9	FSM	ENSG00000127952.17	ENST00000431581.5	1147	9	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_8	49.1259541892063	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGGCCAGAGTGTGTATA	-76045737	True	NA	-81	True	NA	NA	NA	76047953	75996408	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_75996600_76000889_76001003_76003757_76003856_76005258_76005405_76013741_76013888_76021850_76021993_76028641_76028704_76030420_76030528_76047811
transcript_180679.nic	chr7	-	1124	8	NIC	ENSG00000127952.17	novel	1415	9	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_4	60.5683961505082	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGCCTCCTGTACTGAT	-76047990	True	NA	-14	True	NA	NA	NA	76048012	75996341	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_75996600_76000889_76001003_76003757_76003856_76005258_76005405_76021850_76021993_76028641_76028704_76030420_76030525_76047811
transcript_180681.nic	chr7	-	1133	8	NIC	ENSG00000127952.17	novel	1415	9	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	61.0496619522975	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTTTGCTGCCTGAAAGT	-76047990	True	NA	-38	True	NA	NA	NA	76048012	75996365	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_75996600_76003757_76003856_76005258_76005405_76013741_76013888_76021850_76021993_76028641_76028704_76030420_76030525_76047811
transcript_180682.known	chr7	-	953	7	FSM	ENSG00000127952.17	ENST00000340062.9	953	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	65.5413355575447	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGCCTCCTGTACTGAT	-76045767	True	NA	-14	True	NA	NA	NA	76047983	75996341	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_75996600_76000889_76001003_76003757_76003856_76005258_76005405_76028641_76028704_76030420_76030525_76047811
transcript_180685.known	chr7	-	636	5	FSM	ENSG00000127952.17	ENST00000460184.2	636	5	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_4	35.2987251894456	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGCCTCAGGTAGGGCCA	-76047982	False	NA	NA	False	NA	NA	NA	76048004	76013752	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_76013888_76021850_76021993_76028641_76028704_76030420_76030525_76047811
transcript_180690.known	chr7	+	2170	9	FSM	ENSG00000146701.12	ENST00000315758.10	2170	9	0	0	0	0	multi-exon	FALSE	canonical	3	2650	junction_8	101.343398280302	1520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTCCTCTCTTGCATA	76024862	True	NA	19	True	AATAAA	-23	NA	76048105	76067508	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_76048227_76054829_76054999_76057409_76057494_76057968_76058079_76060372_76060499_76063514_76063593_76064338_76064439_76064801_76064954_76066278
transcript_180698.known	chr7	+	2020	8	FSM	ENSG00000146701.12	ENST00000443006.5	2020	8	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	911.988207048709	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTTGTCCTCTCTTGCA	76024841	True	NA	17	True	AATAAA	-21	NA	76048084	76067506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_76048227_76057409_76057494_76057968_76058079_76060372_76060499_76063514_76063593_76064338_76064439_76064801_76064954_76066278
transcript_180701.known	chr7	+	648	2	FSM	ENSG00000146701.12	ENST00000461263.2	648	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGTGCTCGCATTGCCTT	76024807	True	NA	8	True	ATTAAA	-19	NA	76048050	76049047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_76048227_76048575
transcript_180707.known	chr7	+	2150	4	FSM	ENSG00000177679.16	ENST00000612155.1	2150	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	17.326921891156	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGGTGGTGAGACCAGGC	76281691	True	NA	23	True	AATAAA	-18	NA	76282613	76287288	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_76282873_76282963_76283102_76283523_76283603_76285614
transcript_180708.nnic	chr7	+	2211	4	NNC	ENSG00000177679.16	novel	2150	4	NA	NA	-43	0	at_least_one_novel_splicesite	TRUE	canonical	3	32	junction_3	13.1233464566864	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTAGGTGGTGAGACCAGG	76281648	True	NA	22	True	AATAAA	-17	NA	76282570	76287287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_76282873_76282963_76283102_76283523_76283622_76285614
transcript_18071.known	chr1	-	545	6	FSM	ENSG00000116857.17	ENST00000414605.2	545	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	503.553214665541	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCAGCTGCTGCATCCCT	-201147093	True	NA	NA	False	NA	NA	NA	201154464	201135800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_201135816_201143819_201143952_201146739_201146849_201151760_201151853_201153782_201153960_201154444
transcript_180710.nic	chr7	+	2113	3	ISM	ENSG00000177679.16	ENST00000611745.2	3617	15	80675	0	-43	0	3prime_fragment	FALSE	canonical	3	18	junction_2	22	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTAGGTGGTGAGACCAGG	76281648	True	NA	22	True	AATAAA	-17	NA	76282570	76287287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_76282873_76282963_76283102_76285614
transcript_180711.known	chr7	+	772	3	FSM	ENSG00000106211.10	ENST00000674638.1	772	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1775.5	1182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCACTGGCCCAGGCCCTG	76283919	True	NA	62	True	AATAAA	-17	NA	76302672	76304292	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_76303077_76303806_76303866_76303983
transcript_180712.known	chr7	+	687	2	FSM	ENSG00000106211.10	ENST00000674650.1	687	2	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCACTGGCCCAGGCCCTG	76283945	False	NA	62	True	AATAAA	-17	NA	76302698	76304292	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_76303077_76303983
transcript_180714.known	chr7	-	3705	2	FSM	ENSG00000170027.7	ENST00000307630.5	3705	2	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	0	410	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCAGTGCTCCTTAGCTTC	-76320395	True	NA	-20	True	AATAAA	-14	NA	76358991	76326798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_76330234_76358721
transcript_180719.known	chr7	-	2800	11	FSM	ENSG00000146700.9	ENST00000275560.4	2800	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_8	22.8481946770418	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGCAGTCACTGTTTGA	-76408144	True	NA	-12	True	AATAAA	-21	NA	76409697	76389336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_76390376_76391963_76392042_76393404_76393717_76393829_76393905_76395252_76395331_76397517_76397833_76398719_76398798_76400285_76400592_76401007_76401044_76404306_76404506_76409413
transcript_180721.nnic	chr7	-	2811	10	NIC	ENSG00000146700.9	novel	2800	11	NA	NA	-47	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	25.9477157109693	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGCAGTCACTGTTTGA	-76408191	True	NA	-12	True	AATAAA	-21	NA	76409744	76389336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_76390376_76391963_76392042_76393404_76393717_76393829_76393905_76395252_76395331_76397517_76397833_76398719_76398798_76400285_76400592_76404306_76404506_76409413
transcript_180722.nnic	chr7	-	2541	10	NIC	ENSG00000146700.9	novel	2800	11	NA	NA	-47	0	combination_of_known_splicesites	TRUE	canonical	2	5	junction_7	24.8392361863441	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGCAGTCACTGTTTGA	-76408191	True	NA	-12	True	AATAAA	-21	NA	76409744	76389336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_76390376_76391963_76392042_76393404_76393717_76393829_76393905_76395252_76395331_76397517_76397833_76398719_76398798_76401007_76401044_76404306_76404506_76409413
transcript_180725.known	chr7	+	1483	9	FSM	ENSG00000188372.15	ENST00000336517.8	1483	9	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_2	10.6763465192921	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTCGTGGTGTGGTGGT	76397309	True	NA	NA	False	AATAAA	-15	NA	76397517	76442071	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_76397798_76425051_76425277_76429514_76429634_76432926_76433031_76433469_76433648_76434037_76434156_76440249_76440342_76440474_76440612_76441841
transcript_180727.nnic	chr7	-	2505	9	NIC	ENSG00000146700.9	novel	2800	11	NA	NA	-47	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_7	21.3175397267133	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGCAGTCACTGTTTGA	-76408191	True	NA	-12	True	AATAAA	-21	NA	76409744	76389336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_76390376_76391963_76392042_76393404_76393717_76393829_76393905_76395252_76395331_76397517_76397833_76398719_76398798_76404306_76404506_76409413
transcript_18073.known	chr1	-	938	6	FSM	ENSG00000116857.17	ENST00000485839.6	938	6	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_5	473.699229469502	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGGGCTACTTCTCCCTT	-201147062	True	NA	NA	False	NA	NA	NA	201154433	201135598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_201135816_201143819_201143952_201146739_201146849_201151760_201151853_201153857_201153960_201154147
transcript_180732.nnic	chr7	-	2270	8	NIC	ENSG00000146700.9	novel	2800	11	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_7	25.4638599443467	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGCAGTCACTGTTTGA	-76408155	True	NA	-12	True	AATAAA	-21	NA	76409708	76389336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_76390376_76391963_76392042_76393404_76393717_76393829_76393905_76395252_76395331_76397517_76397833_76398719_76398798_76409413
transcript_180735.nnic	chr7	-	2618	8	NIC	ENSG00000146700.9	novel	2800	11	NA	NA	-47	0	intron_retention	FALSE	canonical	3	17	junction_6	22.289376988391	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGCAGTCACTGTTTGA	-76408191	True	NA	-12	True	AATAAA	-21	NA	76409744	76389336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_76390376_76391963_76392042_76393404_76393905_76395252_76395331_76397517_76397833_76398719_76398798_76404306_76404506_76409413
transcript_180746.known	chr7	+	2769	12	FSM	ENSG00000091073.20	ENST00000324432.9	2769	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	100.663090809093	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCAGGTCCTGAGTGTG	76457826	True	NA	24	True	AATAAA	-16	NA	76461700	76505991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_76461837_76463544_76463710_76470299_76470420_76480420_76480778_76482507_76483148_76492152_76492254_76497336_76497478_76500440_76500521_76502297_76502457_76503425_76503588_76504355_76504446_76505373
transcript_180752.nic	chr7	+	2674	11	NIC	ENSG00000091073.20	novel	2769	12	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	86.2424489448207	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCAGGTCCTGAGTGTG	NA	False	NA	24	True	AATAAA	-16	NA	76461654	76505991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_76461837_76463544_76463710_76470299_76470420_76480420_76480778_76482507_76483148_76492152_76492254_76500440_76500521_76502297_76502457_76503425_76503588_76504355_76504446_76505373
transcript_180754.nic	chr7	+	2619	11	NIC	ENSG00000091073.20	novel	2641	11	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	83.9610028525148	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCAGGTCCTGAGTGTG	NA	False	NA	24	True	AATAAA	-16	NA	76461654	76505991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_76461837_76463544_76463710_76477113_76477179_76480420_76480778_76482507_76483148_76492152_76492254_76500440_76500521_76502297_76502457_76503425_76503588_76504355_76504446_76505373
transcript_180755.known	chr7	+	2641	11	FSM	ENSG00000091073.20	ENST00000430490.7	2641	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_6	85.8976134709225	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCAGGTCCTGAGTGTG	76457834	True	NA	24	True	AATAAA	-16	NA	76461708	76505991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_76461837_76463544_76463710_76480420_76480778_76482507_76483148_76492152_76492254_76497336_76497478_76500440_76500521_76502297_76502457_76503425_76503588_76504355_76504446_76505373
transcript_18076.known	chr1	-	507	6	FSM	ENSG00000116857.17	ENST00000435310.5	507	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_5	480.431306223897	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCAGCTGCTGCATCCCT	-201147047	False	NA	NA	False	NA	NA	NA	201154418	201135800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_201135816_201143819_201143952_201146739_201146849_201151760_201151853_201153857_201153960_201154361
transcript_180769.nic	chr7	+	2554	10	NIC	ENSG00000091073.20	novel	2641	11	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	114	junction_2	48.3505716385833	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCAGGTCCTGAGTGTG	NA	False	NA	24	True	AATAAA	-16	NA	76461654	76505991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_76461837_76463544_76463710_76480420_76480778_76482507_76483148_76492152_76492254_76500440_76500521_76502297_76502457_76503425_76503588_76504355_76504446_76505373
transcript_18077.known	chr1	-	1544	6	FSM	ENSG00000116857.17	ENST00000367332.5	1544	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	485.806710534138	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCTGGTTTTTAAGAGA	-201147130	True	NA	-6	True	ATTAAA	-17	NA	201154501	201134772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_201135816_201143819_201143952_201146739_201146849_201151760_201151853_201153848_201153960_201154444
transcript_180773.known	chr7	+	2472	10	FSM	ENSG00000091073.20	ENST00000413936.6	2472	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	94.3454383019924	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGTCCTGAGTGTGTGC	76457841	True	NA	27	True	AATAAA	-19	NA	76461715	76505994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_76461837_76480420_76480778_76482507_76483148_76492152_76492254_76497336_76497478_76500440_76500521_76502297_76502457_76503425_76503588_76504355_76504446_76505373
transcript_18078.known	chr1	-	1564	6	FSM	ENSG00000116857.17	ENST00000367333.6	1564	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	501.034928922126	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGGTTTTTAAGAGAT	-201171550	True	NA	-5	True	ATTAAA	-18	NA	201171574	201134771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_201135816_201143819_201143952_201146739_201146849_201151760_201151853_201153857_201153960_201171489
transcript_180787.nic	chr7	+	2388	9	NIC	ENSG00000091073.20	novel	2641	11	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_1	59.1349093175934	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCAGGTCCTGAGTGTG	NA	False	NA	24	True	AATAAA	-16	NA	76461655	76505991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_76461837_76480420_76480778_76482507_76483148_76492152_76492254_76500440_76500521_76502297_76502457_76503425_76503588_76504355_76504446_76505373
transcript_180800.known	chr7	+	2250	6	FSM	ENSG00000243566.7	ENST00000334348.8	2250	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.16619037896906	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGCCTGAATGGTGCCC	NA	False	NA	NA	False	AATAAA	-17	NA	76510551	76516522	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_76510738_76510902_76511053_76511656_76511883_76513083_76513164_76513946_76514077_76515044
transcript_180802.known	chr7	+	1041	5	FSM	ENSG00000243566.7	ENST00000394849.1	1041	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	0.866025403784439	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCCAGTCCCCACCTCCA	NA	False	NA	NA	False	NA	NA	NA	76510614	76515456	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_76510738_76510902_76511053_76511656_76511883_76513946_76514077_76515044
transcript_180804.known	chr7	-	1587	8	FSM	ENSG00000146707.15	ENST00000424818.5	1587	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	32.4540491483335	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCACCCTGTGTCTGCTTC	NA	False	NA	NA	False	NA	NA	NA	76627261	76610027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_76610216_76611453_76611592_76611721_76611814_76618182_76618301_76618496_76618616_76625521_76625684_76625999_76626216_76626707
transcript_180807.known	chr7	-	1528	7	FSM	ENSG00000146707.15	ENST00000310842.9	1528	7	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	17.1431878274984	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTCGTGGTGTGGTGGT	NA	False	NA	NA	False	AATAAA	-15	NA	76627279	76609985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_76610216_76611453_76611592_76611721_76611814_76618182_76618301_76625521_76625684_76625999_76626216_76626707
transcript_180817.known	chr7	+	962	3	FSM	ENSG00000205485.13	ENST00000450661.1	962	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	3.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAACCCACCAGTTAAG	NA	False	NA	NA	False	TATAAA	-23	NA	76549360	76626278	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_76549862_76551419_76551523_76625920
transcript_180833.known	chr7	-	1194	8	FSM	ENSG00000214439.5	ENST00000643546.1	1194	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	6.0676458804558	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTATTATGTCCTCATG	-77122008	False	NA	NA	False	NA	NA	NA	77122026	77083786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_77084022_77094001_77094098_77098909_77098952_77109544_77109663_77109937_77110077_77113390_77113484_77119516_77119627_77121665
transcript_180837.known	chr7	+	2316	18	FSM	ENSG00000127947.16	ENST00000415482.6	2316	18	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	70.3301163052897	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGGGAGCTAGAAGACAC	77537896	True	NA	NA	False	NA	NA	NA	77538034	77639280	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_77538107_77571077_77571187_77581426_77581504_77583554_77583651_77585542_77585582_77592184_77592257_77597841_77597902_77600663_77600807_77607234_77607302_77610764_77610843_77610947_77611047_77618479_77618566_77626704_77627676_77632347_77632426_77635781_77635850_77637017_77637049_77638623_77638732_77639218
transcript_18084.known	chr1	-	1994	5	FSM	ENSG00000116857.17	ENST00000367330.6	1994	5	0	0	0	0	multi-exon	FALSE	canonical	3	1148	junction_4	75.1976562134752	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGGTTTTTAAGAGAT	-201147103	True	NA	-5	True	ATTAAA	-18	NA	201154474	201134771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_201135816_201143819_201143952_201146739_201146849_201151760_201151853_201153857
transcript_180840.known	chr7	-	902	2	FSM	ENSG00000214293.10	ENST00000447009.1	902	2	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTATCACATATACAGAAG	-77694706	True	NA	NA	False	ATTAAA	-37	NA	77696253	77684784	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_77685329_77695895
transcript_180841.known	chr7	-	2111	3	FSM	ENSG00000214293.10	ENST00000665948.1	2111	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	56.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAATATTGAATAAAAA	-77694708	True	NA	-35	True	NA	NA	NA	77696255	77657694	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_77659319_77685201_77685329_77695895
transcript_180842.known	chr7	+	6406	8	FSM	ENSG00000187257.16	ENST00000334955.13	6406	8	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	14.7841614091374	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTTTACTTTTGTAATT	77694391	True	NA	12	True	AATAAA	-21	NA	77696458	77783022	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_77697056_77736409_77736527_77749423_77750065_77765494_77765633_77768660_77768804_77773146_77773315_77778337_77778447_77778529
transcript_180845.nnic	chr7	+	1328	3	NNC	ENSG00000187257.16	novel	6406	8	NA	NA	-54	-35307	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	40.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAGTCTACTTAACTTTA	77694337	True	NA	NA	False	AATAGA	-40	NA	77696404	77738046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_77697056_77736409_77736527_77737486
transcript_180846.nic	chr7	+	793	3	ISM	ENSG00000187257.16	ENST00000334955.13	6406	8	-54	33574	-54	-23905	5prime_fragment	FALSE	canonical	3	83	junction_1	1.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAGAAGACTTACAAATTA	77694337	True	NA	-51	True	AAAACA	-39	NA	77696404	77749448	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_77697056_77736409_77736527_77749423
transcript_180847.nic	chr7	+	768	2	ISM	ENSG00000187257.16	ENST00000334955.13	6406	8	-54	46496	-54	-36827	5prime_fragment	FALSE	canonical	3	83	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTTTATTCAGTGATT	77694337	True	NA	NA	False	AGTAAA	-15	NA	77696404	77736526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_77697056_77736409
transcript_180848.known	chr7	-	877	2	FSM	ENSG00000135211.6	ENST00000257663.4	877	2	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_1	0	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTACATGACTCTTGA	-77795587	True	NA	-9	True	AATAAA	-18	NA	77798434	77793727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_77794424_77798253
transcript_180849.known	chr7	+	4793	18	FSM	ENSG00000006576.16	ENST00000307305.12	4793	18	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_13	18.7349016488581	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTGTTTTTTTTTTTAATT	77796527	True	NA	21	True	AATAAA	-16	NA	77798804	77957225	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_77798972_77840220_77840301_77893607_77893665_77900710_77900781_77901761_77901921_77908792_77908959_77910244_77910410_77920278_77920466_77922622_77922779_77929108_77929328_77937709_77937839_77940029_77940303_77940527_77940660_77942699_77942787_77949677_77949834_77951616_77951713_77953768_77953895_77954857
transcript_180852.known	chr7	+	1977	12	FSM	ENSG00000006576.16	ENST00000424760.5	1977	12	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_10	12.35695006367	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTTAATTTTGTTTT	77796535	True	NA	2	True	AATAAA	-15	NA	77798812	77940459	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_77798972_77840220_77840301_77893607_77893665_77900710_77900781_77901761_77901921_77908792_77908959_77910244_77910410_77920278_77920466_77922622_77922779_77929108_77929328_77937709_77937839_77940029
transcript_180860.known	chr7	+	1738	9	FSM	ENSG00000006576.16	ENST00000415251.6	1738	9	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_8	6.10327780786685	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTACTCTTTTTGAGCT	77796610	True	NA	NA	False	AATAAA	-33	NA	77798887	77923392	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_77798972_77840220_77840301_77893607_77893665_77900710_77900781_77901761_77901921_77908792_77908959_77910244_77910410_77920278_77920466_77922622
transcript_180863.known	chr7	-	2013	9	FSM	ENSG00000187391.22	ENST00000628781.1	2013	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	7.0178344238091	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTGTTTTTGAATTCA	-78770131	False	NA	-21	True	AATAAA	-37	NA	78771080	78255788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_78256582_78343777_78343961_78345921_78346044_78369155_78369214_78489760_78489841_78501576_78501788_78521429_78521646_78627119_78627240_78770850
transcript_180864.nic	chr7	-	1153	4	ISM	ENSG00000187391.22	ENST00000628781.1	2013	9	-276	245688	-33	244	5prime_fragment	FALSE	canonical	3	46	junction_2	4.24264068711928	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAAATTCTGGTAACAGC	NA	False	NA	NA	False	AAAAAG	-8	NA	78771356	78501476	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_78501788_78521429_78521646_78627119_78627240_78770850
transcript_180866.known	chr7	+	10083	8	FSM	ENSG00000127955.17	ENST00000649796.2	10083	8	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_5	34.2904758598343	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTCCATATTATTTTT	80129562	True	NA	NA	False	AATAAA	-18	NA	80134830	80226181	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_80135279_80188950_80188994_80189089_80189232_80199224_80199383_80203703_80203833_80210968_80211099_80212715_80212870_80217302
transcript_180870.known	chr7	+	3237	8	FSM	ENSG00000127955.17	ENST00000649922.1	3237	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	121.288322368055	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTTAATAAATCCTAATA	80129584	True	NA	-24	True	AATGAA	-25	NA	80134852	80219362	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_80135274_80188950_80188994_80189089_80189232_80199224_80199383_80203703_80203833_80210968_80211099_80212715_80212870_80217302
transcript_180871.known	chr7	+	1939	8	FSM	ENSG00000127955.17	ENST00000649214.1	1939	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	121.288322368055	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACAAACATTGCACAGACT	80129583	True	NA	0	True	AATAAA	-11	NA	80134851	80218032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_80135279_80188924_80188994_80189089_80189232_80199224_80199383_80203703_80203833_80210968_80211099_80212715_80212870_80217302
transcript_180872.known	chr7	-	4874	18	FSM	ENSG00000075223.14	ENST00000265361.8	4874	18	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_11	3.2165230857629	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATGTTTCTAGCTTTTAT	-80918723	True	NA	-3	True	AATAAA	-18	NA	80919051	80742537	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_80745308_80748897_80749029_80751268_80751337_80758330_80758489_80761615_80761658_80765154_80765244_80789305_80789529_80798091_80798237_80800756_80800827_80802664_80802780_80804105_80804249_80805638_80805759_80810610_80810702_80818298_80818419_80827424_80827488_80828584_80828746_80916678_80916820_80918827
transcript_180876.nic	chr7	-	1525	12	ISM	ENSG00000153956.16	ENST00000356253.9	3858	39	-126	82695	-64	17539	5prime_fragment	TRUE	canonical	3	46	junction_3	11.2573208503299	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTGTAATTTTATAATA	-82443830	False	NA	NA	False	AATAAA	-10	NA	82443841	82032796	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_82032902_82038076_82038236_82060427_82060528_82064303_82064355_82066454_82066525_82084768_82084901_82117043_82117174_82136634_82136677_82170549_82170610_82335134_82335252_82349567_82349650_82443364
transcript_180878.nic	chr7	-	1434	11	ISM	ENSG00000153956.16	ENST00000356253.9	3858	39	-230	88065	-168	12169	5prime_fragment	FALSE	canonical	3	46	junction_2	11.6378692207809	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTGAAAGACGCGGTGAA	-82443934	False	NA	19	True	AATAAA	-4	NA	82443945	82038166	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_82038236_82060427_82060528_82064303_82064355_82066454_82066525_82084768_82084901_82117043_82117174_82136634_82136677_82170549_82170610_82335134_82335252_82349567_82349650_82443364
transcript_18088.known	chr1	-	1156	16	FSM	ENSG00000118194.21	ENST00000422165.6	1156	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_13	12.2074658394862	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCATTTCTGTCACGTCC	-201377647	False	440	-5	True	AATAAA	-18	NA	201377680	201359013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_201359256_201359622_201359664_201361278_201361370_201361912_201362023_201363295_201363407_201364297_201364376_201365190_201365308_201365609_201365671_201366837_201366872_201367770_201367807_201368161_201368228_201369815_201369846_201372026_201372042_201372144_201372156_201373213_201373269_201377622
transcript_180880.nic	chr7	-	1233	9	ISM	ENSG00000153956.16	ENST00000423588.1	1429	11	-82	13853	-21	-13254	5prime_fragment	FALSE	canonical	3	50	junction_2	10.6821989777386	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGATGACTTTTATATTC	-82442160	True	NA	NA	False	AAAAAG	-14	NA	82443798	82064188	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_82064355_82066454_82066525_82084768_82084901_82117043_82117174_82136634_82136677_82170549_82170610_82335134_82335252_82349567_82349650_82443364
transcript_180888.nnic	chr7	+	806	2	Antisense	novelGene_ENSG00000170381.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	129	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	83460001	False	NA	24	True	AATAAA	-22	NA	83460013	83465347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr7_+_83460267_83464794
transcript_18089.known	chr1	-	1108	15	FSM	ENSG00000118194.21	ENST00000412633.3	1108	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	12.6686580962304	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTGGCATTTCTGTCAC	-201377633	False	440	-9	True	AATAAA	-14	NA	201377666	201359017	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_201359256_201359622_201359664_201361278_201361370_201361912_201362023_201363295_201363407_201364297_201364376_201365190_201365308_201365609_201365671_201366837_201366872_201367770_201367807_201368161_201368228_201372026_201372042_201372144_201372156_201373213_201373269_201377622
transcript_180890.nnic	chr7	+	668	2	Antisense	novelGene_ENSG00000170381.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	248	junction_1	0	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	83460001	False	NA	18	True	AATAAA	-16	NA	83460013	83465341	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr7_+_83460267_83464926
transcript_180894.nic	chr7	-	3042	18	NIC	ENSG00000075213.11	novel	2550	18	NA	NA	-74	476	combination_of_known_junctions	FALSE	canonical	3	18	junction_17	37.6217745976374	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAGCCATCCATCATCCA	-84195154	False	NA	NA	False	ATTAAA	-13	NA	84195235	83960824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_83961827_83963204_83963348_83977131_83977197_83981320_83981479_83985435_83985478_84001954_84002047_84005338_84005559_84007352_84007498_84011021_84011092_84011182_84011298_84014208_84014352_84046323_84046444_84060464_84060559_84110469_84110590_84129122_84129186_84134793_84134952_84194474_84194669_84195137
transcript_180895.known	chr7	-	2550	18	FSM	ENSG00000075213.11	ENST00000436949.5	2550	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_17	41.3420201460667	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACATGAACTTTTTTCAT	-84195364	False	NA	NA	False	AAAACA	-8	NA	84195445	83961300	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_83961827_83963204_83963348_83977131_83977197_83981320_83981479_83985435_83985478_84001954_84002047_84005338_84005559_84007352_84007498_84011021_84011092_84011182_84011298_84014208_84014352_84046323_84046444_84060464_84060559_84110469_84110590_84129122_84129186_84134793_84134952_84194474_84194669_84195363
transcript_180898.known	chr7	-	8113	17	FSM	ENSG00000075213.11	ENST00000265362.9	8113	17	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_15	14.9330537315714	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATTTGTGTAGCTCAGT	-84194708	False	NA	NA	False	AGTAAA	-20	NA	84194789	83955776	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_83961827_83963204_83963348_83977131_83977197_83981320_83981479_83985435_83985478_84001954_84002047_84005338_84005559_84007352_84007498_84011021_84011092_84011182_84011298_84014208_84014352_84046323_84046444_84060464_84060559_84110469_84110590_84129122_84129186_84134793_84134952_84194474
transcript_180901.nnic	chr7	-	3251	17	NNC	ENSG00000075213.11	novel	8113	17	NA	NA	44089	476	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_16	39.2212773090067	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAGCCATCCATCATCCA	-84150646	True	NA	NA	False	ATTAAA	-13	NA	84150700	83960824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_83961827_83963204_83963348_83977131_83977197_83981320_83981479_83985435_83985478_84001954_84002047_84005338_84005559_84007352_84007498_84011021_84011092_84011182_84011298_84014208_84014352_84046323_84046444_84060464_84060559_84110469_84110590_84129122_84129186_84134793_84134952_84150199
transcript_180912.nic	chr7	-	2408	16	ISM	ENSG00000075213.11	ENST00000436949.5	2550	18	292	1923	8	-1923	internal_fragment	FALSE	canonical	3	144	junction_14	15.1695601635498	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGAGCGAAAAGAAGAGG	-84195072	False	NA	NA	False	NA	NA	NA	84195153	83963223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_83963348_83977131_83977197_83981320_83981479_83985435_83985478_84001954_84002047_84005338_84005559_84007352_84007498_84011021_84011092_84011182_84011298_84014208_84014352_84046323_84046444_84060464_84060559_84110469_84110590_84129122_84129186_84134793_84134952_84194474
transcript_180914.nic	chr7	-	2246	15	ISM	ENSG00000075213.11	ENST00000436949.5	2550	18	292	15869	8	-15869	internal_fragment	FALSE	canonical	3	144	junction_13	15.7001559851864	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGACCCACTGACTCACT	-84195072	False	NA	NA	False	AAGAAA	-1	NA	84195153	83977169	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_83977197_83981320_83981479_83985435_83985478_84001954_84002047_84005338_84005559_84007352_84007498_84011021_84011092_84011182_84011298_84014208_84014352_84046323_84046444_84060464_84060559_84110469_84110590_84129122_84129186_84134793_84134952_84194474
transcript_180919.known	chr7	+	4268	6	FSM	ENSG00000198822.11	ENST00000361669.7	4268	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.8	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGATAATGGTTTGTTC	86643895	True	NA	NA	False	AATAAA	-21	NA	86643908	86864879	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_86644873_86765005_86765614_86786260_86787117_86838838_86839906_86850369_86850545_86864281
transcript_180923.nnic	chr7	-	3611	22	NNC	ENSG00000164659.15	novel	6796	22	NA	NA	19235	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_21	39.4951703468364	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTCATTTTTCCATAGG	NA	False	NA	-22	True	ACTAAA	-26	NA	87040280	86879938	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_86880531_86891723_86891890_86892921_86893101_86897505_86897633_86907669_86907772_86908446_86908544_86909811_86910002_86912071_86912246_86912940_86913205_86914722_86914861_86918441_86918545_86919219_86919311_86925527_86925657_86926735_86926917_86938125_86938215_86938807_86938961_86940009_86940116_86942017_86942105_86944898_86945047_86947726_86947923_86964903_86965025_87040102
transcript_180924.known	chr7	-	6796	22	FSM	ENSG00000164659.15	ENST00000450689.7	6796	22	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_21	43.2107633353915	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTTTCAGTTAAATTT	-87059489	True	NA	-14	True	AATAAA	-23	NA	87059654	86876905	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_86880531_86891723_86891890_86892921_86893101_86897505_86897633_86907669_86907772_86908446_86908544_86909811_86910002_86912071_86912246_86912940_86913205_86914722_86914861_86918441_86918545_86919219_86919311_86925527_86925657_86926735_86926917_86938125_86938215_86938807_86938961_86940009_86940116_86942017_86942105_86944898_86945047_86947726_86947923_86964903_86965025_87059324
transcript_180929.nnic	chr7	-	3481	22	NNC	ENSG00000164659.15	novel	6796	22	NA	NA	19288	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_21	39.4951703468364	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTTCCCATTATTTAT	-87038097	True	NA	-2	True	ATTAAA	-14	NA	87040227	86880015	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_86880531_86891723_86891890_86892921_86893101_86897505_86897633_86907669_86907772_86908446_86908544_86909811_86910002_86912071_86912246_86912940_86913205_86914722_86914861_86918441_86918545_86919219_86919311_86925527_86925657_86926735_86926917_86938125_86938215_86938807_86938961_86940009_86940116_86942017_86942105_86944898_86945047_86947726_86947923_86964903_86965025_87040102
transcript_180932.nnic	chr7	-	3519	22	NNC	ENSG00000164659.15	novel	6796	22	NA	NA	19245	0	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_20	38.7193518620441	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTTCCCATTATTTAT	NA	False	NA	-2	True	ATTAAA	-14	NA	87040270	86880015	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_86880531_86891723_86891890_86892921_86893101_86897505_86897633_86907669_86907772_86908446_86908544_86909811_86910002_86912071_86912246_86912940_86913205_86914722_86914861_86918441_86918545_86919219_86919311_86925527_86925657_86926735_86926917_86938125_86938215_86938807_86938961_86940009_86940116_86942017_86942105_86944898_86945047_86947726_86947923_87039755_87039872_87040102
transcript_180938.nnic	chr7	-	3729	21	NNC	ENSG00000164659.15	novel	6796	22	NA	NA	19266	0	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_20	31.9012538938519	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTTCCCATTATTTAT	-87038119	True	NA	-2	True	ATTAAA	-14	NA	87040249	86880015	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_86880531_86891723_86891890_86892921_86893101_86897505_86897633_86907669_86907772_86908446_86908544_86909811_86910002_86912071_86912246_86912940_86913205_86914722_86914861_86918441_86918545_86919219_86919311_86925527_86925657_86926735_86926917_86938125_86938215_86938807_86938961_86940009_86940116_86942017_86942105_86944898_86945047_86947726_86947923_87039755
transcript_18096.known	chr1	-	2627	10	FSM	ENSG00000159166.15	ENST00000391967.7	2627	10	0	0	0	0	multi-exon	TRUE	canonical	3	141	junction_3	19.0904280843685	512	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTGATTGACTGCCCTA	-201397398	True	NA	0	True	TTTAAA	-15	NA	201399324	201380832	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_201381894_201382251_201382327_201382652_201382740_201383073_201383212_201383316_201383390_201384791_201384836_201385700_201385806_201386334_201387179_201389159_201389304_201399268
transcript_180960.nic	chr7	+	3913	19	NIC	ENSG00000135164.19	novel	4038	20	NA	NA	-30	0	combination_of_known_junctions	TRUE	canonical	3	21	junction_2	63.2148013610034	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGCAAGATTTGTTTTT	NA	False	NA	11	True	AATAAA	-15	NA	87152378	87196323	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_87152556_87154389_87154529_87163494_87163618_87164933_87165051_87166482_87166606_87170994_87171090_87173534_87173650_87174592_87174670_87179544_87179703_87181308_87181342_87182227_87182338_87184396_87184626_87185828_87185981_87188091_87188302_87190944_87191028_87193197_87193354_87193724_87194103_87194683_87194829_87195030
transcript_180968.known	chr7	+	3954	18	FSM	ENSG00000135164.19	ENST00000447863.5	3954	18	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_9	56.8369853754964	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCAAGATTTGTTTTTAC	87148756	True	NA	13	True	AATAAA	-17	NA	87152411	87196325	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_87152556_87163494_87163618_87164933_87165051_87166482_87166606_87170994_87171090_87173534_87173650_87174592_87174670_87179544_87179703_87181308_87181342_87182016_87182338_87184396_87184626_87185828_87185981_87188091_87188302_87190944_87191028_87193197_87193354_87193724_87194103_87194683_87194829_87195030
transcript_180969.known	chr7	+	3915	18	FSM	ENSG00000135164.19	ENST00000579677.5	3915	18	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_9	51.4141875859291	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCAAGATTTGTTTTTAC	87148756	True	NA	13	True	AATAAA	-17	NA	87152411	87196325	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_87152556_87163494_87163618_87164933_87165051_87166482_87166606_87170994_87171090_87173534_87173650_87174592_87174670_87179544_87179703_87181308_87181342_87182055_87182338_87184396_87184626_87185828_87185981_87188091_87188302_87190944_87191028_87193197_87193354_87193724_87194103_87194683_87194829_87195030
transcript_180970.known	chr7	+	3702	18	FSM	ENSG00000135164.19	ENST00000331242.12	3702	18	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_9	38.2007989191625	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCAAGATTTGTTTTTAC	87148797	True	NA	13	True	AATAAA	-17	NA	87152452	87196325	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_87152556_87163494_87163618_87164933_87165051_87166482_87166606_87170994_87171090_87173534_87173650_87174592_87174670_87179544_87179703_87181308_87181342_87182227_87182338_87184396_87184626_87185828_87185981_87188091_87188302_87190944_87191028_87193197_87193354_87193724_87194103_87194683_87194829_87195030
transcript_180985.known	chr7	+	783	7	FSM	ENSG00000135164.19	ENST00000449088.7	783	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	75.5086455682762	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGAAGATAAGGATTCTC	87148797	True	NA	NA	False	NA	NA	NA	87152452	87173617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_87152556_87154389_87154529_87163494_87163618_87164933_87165051_87166482_87166606_87170994_87171090_87173534
transcript_180987.nic	chr7	-	1408	5	NIC	ENSG00000135185.12	novel	1273	5	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_4	208.556946659659	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTTTTTTTTCTTGACTT	-87215865	True	NA	-4	True	AATAAA	-18	NA	87220578	87196161	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_87196759_87197940_87198046_87199006_87199058_87219425_87219719_87220216
transcript_180988.known	chr7	-	1273	5	FSM	ENSG00000135185.12	ENST00000433078.5	1273	5	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_4	84.2778143997577	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTTTTTTTTCTTGACTT	-87215874	True	NA	-4	True	AATAAA	-18	NA	87220587	87196161	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_87196759_87197940_87198046_87199006_87199058_87219425_87219719_87220360
transcript_180989.nnic	chr7	-	1115	5	NNC	ENSG00000135185.12	novel	1273	5	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_4	205.996965997075	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTTTTTTTTCTTGACTT	NA	False	NA	-4	True	AATAAA	-18	NA	87220592	87196161	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_87196759_87197940_87198046_87199006_87199058_87219425_87219719_87220523
transcript_180990.known	chr7	-	1062	4	FSM	ENSG00000135185.12	ENST00000257637.8	1062	4	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_3	40.8357142163028	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTTTCTTGACTTTT	-87215019	False	4713	-2	True	AATAAA	-20	NA	87219732	87196159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_87196759_87197940_87198046_87199006_87199058_87219425
transcript_180992.known	chr7	-	601	3	FSM	ENSG00000135185.12	ENST00000423734.1	601	3	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_2	50	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATTAGTGGA	-87214917	False	NA	NA	False	NA	NA	NA	87219630	87197700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_87198046_87199006_87199058_87219425
transcript_180994.known	chr7	-	769	2	FSM	ENSG00000224046.3	ENST00000433446.1	769	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTGTGTTGATAACTT	-87151924	True	NA	-3	True	AATAAA	-15	NA	87152282	87151422	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_87151659_87151749
transcript_180995.known	chr7	-	338	2	FSM	ENSG00000224046.3	ENST00000446309.1	338	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTCAGAAGCAGCATTT	-87152385	False	NA	-20	True	NA	NA	NA	87152420	87151439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_87151659_87152301
transcript_180997.known	chr7	-	1057	4	FSM	ENSG00000182165.19	ENST00000359941.11	1144	4	87	0	14	0	multi-exon	FALSE	canonical	2	8	junction_1	36.0647565729573	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTAATGATCTTCAGGT	-87343561	True	NA	NA	False	NA	NA	NA	87345447	87325114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_87325445_87329934_87330095_87341522_87341685_87345042
transcript_180999.known	chr7	-	1422	4	FSM	ENSG00000182165.19	ENST00000416560.7	1447	4	25	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	35.0269737329517	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTCTCTGGTTC	-87343629	True	NA	NA	False	AATAAA	-15	NA	87345515	87324586	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_87325445_87341522_87341685_87345042_87345234_87345304
transcript_1810.nic	chr1	-	2274	15	ISM	ENSG00000116198.14	ENST00000675375.1	5326	22	3	16286	3	375	5prime_fragment	FALSE	canonical	3	14	junction_7	22.3420761646481	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTACAAGGGCAGCTGGC	-3853980	True	NA	-52	True	AATAAA	-2	NA	3857222	3829316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_3829374_3829790_3829998_3831045_3831223_3833861_3834036_3834924_3835093_3836494_3836693_3837291_3837346_3838963_3839120_3839607_3839777_3844906_3844984_3845288_3845352_3847474_3847614_3848607_3848782_3852294_3852422_3856888
transcript_181000.known	chr7	-	3150	3	FSM	ENSG00000182165.19	ENST00000661943.2	3168	3	18	0	6	0	multi-exon	FALSE	canonical	3	85	junction_2	8	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCAACCTCACCCTTTG	-87343642	True	NA	NA	False	ATTAAA	-15	NA	87345528	87322942	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_87325445_87341522_87341685_87345042
transcript_181001.known	chr7	-	526	3	FSM	ENSG00000182165.19	ENST00000432193.7	561	3	32	3	2	2	multi-exon	FALSE	canonical	1	6	junction_2	47.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTTCTGAGTCCTAATT	-87343616	True	NA	-3	True	AATAAA	-18	NA	87345502	87325349	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_87325445_87341522_87341685_87345233
transcript_181002.known	chr7	-	1241	3	FSM	ENSG00000182165.19	ENST00000421293.3	1265	3	24	0	6	0	multi-exon	FALSE	canonical	3	44	junction_2	28.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTATTTGTTTCTCTCTGG	-87343642	True	NA	NA	False	AATAAA	-12	NA	87345528	87324589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_87325445_87341522_87341685_87345304
transcript_181003.known	chr7	+	3205	18	FSM	ENSG00000005469.12	ENST00000331536.8	3205	18	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	9.28666864558394	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTCTGGTGCTTTTTGA	87345161	True	NA	5	True	AATAAA	-17	NA	87345663	87399794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_87345768_87346339_87346431_87349047_87349184_87359205_87359331_87361389_87361572_87361727_87361853_87369375_87369485_87375631_87375726_87375827_87375954_87377348_87377451_87381909_87381994_87382073_87382182_87382412_87382544_87391588_87391713_87392565_87392645_87392729_87392824_87392947_87393068_87398523
transcript_181006.known	chr7	+	1213	4	FSM	ENSG00000005469.12	ENST00000412227.6	1213	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	4.49691252107735	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGTTTTATCTGTATC	87345190	True	NA	NA	False	ATTAAA	-20	NA	87345692	87360116	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_87345768_87346339_87346431_87349047_87349184_87359205
transcript_181009.known	chr7	+	2342	12	FSM	ENSG00000006634.8	ENST00000431138.5	2342	12	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	96.5414311779367	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATATATGTTCGTAATT	87871277	False	NA	33	True	AATAAA	-24	NA	87876533	87908373	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_87876779_87878052_87878134_87884978_87885159_87886843_87886895_87887328_87887399_87887982_87888060_87896473_87896511_87897293_87897340_87900220_87900350_87900763_87900879_87904291_87904417_87907187
transcript_181013.known	chr7	+	3655	12	FSM	ENSG00000006634.8	ENST00000265728.6	3655	12	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_2	36.454432101388	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTTTCCATTGTAAATT	87871236	True	NA	NA	False	AATAAA	-28	NA	87876492	87909553	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_87876779_87878052_87878226_87884978_87885159_87886843_87886895_87887328_87887399_87887982_87888060_87896473_87896511_87897293_87897340_87900220_87900350_87900763_87900879_87904291_87904417_87907187
transcript_181016.known	chr7	-	4056	12	FSM	ENSG00000075303.13	ENST00000341119.10	4056	12	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_10	7.31126155013931	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTAATCTGTCAACATTT	-87874552	True	NA	-13	True	AATAAA	-18	NA	87876360	87833567	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_87836362_87836729_87836811_87841632_87841715_87843753_87843864_87846948_87847123_87847852_87847978_87849880_87849949_87854203_87854311_87856291_87856352_87858630_87858752_87860571_87860641_87876095
transcript_181024.nic	chr7	+	1934	11	ISM	ENSG00000006634.8	ENST00000265728.6	3655	12	-646	5138	-369	-2804	5prime_fragment	FALSE	canonical	3	273	junction_2	38.0973752376722	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAATTAGTTTTATCAACC	87875771	True	NA	NA	False	AAAAAG	-5	NA	87875846	87904415	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_87876779_87878052_87878226_87884978_87885159_87886843_87886895_87887328_87887399_87887982_87888060_87896473_87896511_87897293_87897340_87900220_87900350_87900763_87900879_87904291
transcript_181025.nnic	chr7	+	2476	11	NIC	ENSG00000006634.8	novel	3655	12	NA	NA	-120	0	combination_of_known_splicesites	FALSE	canonical	3	46	junction_10	100.400996010996	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATATATGTTCGTAATT	87876308	True	NA	33	True	AATAAA	-24	NA	87876366	87908373	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_87876779_87878052_87878226_87884978_87885159_87886843_87886895_87887328_87887399_87887982_87888060_87896473_87896511_87897293_87897340_87900220_87900350_87900763_87900879_87907187
transcript_181036.known	chr7	+	574	3	FSM	ENSG00000006634.8	ENST00000486925.1	574	3	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_2	62.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGAAGGGCTATATCCT	87876540	False	NA	NA	False	NA	NA	NA	87876582	87885183	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_87876779_87878052_87878226_87884978
transcript_181037.known	chr7	+	797	2	FSM	ENSG00000006634.8	ENST00000495067.1	797	2	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGTTTGTCTGGACTAGT	87871230	True	NA	NA	False	NA	NA	NA	87876486	87878557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_87876779_87878052
transcript_181042.known	chr7	+	9334	30	FSM	ENSG00000008277.15	ENST00000398204.8	9334	30	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_28	5.85090214290499	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACGACTCTTCTTTTTCT	87934125	False	NA	17	True	AATAAA	-19	NA	87934142	88202889	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_87934551_87935025_87935187_87978335_87978413_88075625_88075693_88108175_88108259_88114583_88114648_88116744_88116815_88125588_88125660_88128601_88128677_88130387_88130460_88131268_88131436_88132866_88132952_88134328_88134420_88135979_88136032_88143025_88143126_88145124_88145197_88145414_88145508_88148976_88149058_88150980_88151032_88151256_88151321_88153220_88153327_88155886_88156007_88163011_88163181_88165831_88165947_88168136_88168228_88171543_88171562_88181504_88181606_88181957_88182025_88193115_88193240_88196470
transcript_181050.known	chr7	-	1972	8	FSM	ENSG00000075142.14	ENST00000265729.7	1972	8	0	0	0	0	multi-exon	TRUE	canonical	3	2409	junction_3	183.184528354802	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTAGCCTCATTTCACTA	-88191010	True	NA	-5	True	AATAAA	-17	NA	88220038	88205114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_88206505_88208506_88208566_88209338_88209453_88209982_88210131_88210881_88210926_88217121_88217192_88218858_88218943_88219975
transcript_181052.known	chr7	-	1307	8	FSM	ENSG00000075142.14	ENST00000419179.5	1307	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	984.845227662184	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATACACATAGCAGAGT	-88191008	True	NA	NA	False	TTTAAA	-44	NA	88220036	88205657	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_88206505_88208506_88208566_88209338_88209433_88210082_88210131_88210881_88210926_88217121_88217192_88218858_88218943_88219975
transcript_18106.known	chr1	+	556	2	FSM	ENSG00000282221.1	ENST00000633182.1	556	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTTTGTATGCAGACAA	201399274	False	NA	NA	False	TATAAA	-15	NA	201399632	201401190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_201399791_201400792
transcript_181061.known	chr7	+	1219	5	FSM	ENSG00000164647.9	ENST00000297205.7	1219	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	3.16227766016838	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGATGTTTCTCTTTGTA	90153870	True	NA	6	True	AATAAA	-16	NA	90154468	90164827	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_90154544_90159757_90159873_90160804_90161318_90161913_90162079_90164476
transcript_181065.known	chr7	+	2456	6	FSM	ENSG00000157214.14	ENST00000394626.5	2456	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	15.2787434038274	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATGGAGGCCTTCTAAT	90210850	True	NA	72	True	ATTAAA	-15	NA	90211743	90237678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_90212046_90225049_90225575_90226970_90227499_90229871_90230037_90232336_90232485_90236890
transcript_181067.known	chr7	+	6873	5	FSM	ENSG00000157214.14	ENST00000287908.7	6873	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	12.1937483982572	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTATACACGTGGATTT	NA	False	NA	25	True	AATAAA	-36	NA	90211685	90237631	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_90212046_90225049_90225575_90226970_90227499_90229871_90230037_90232336
transcript_181071.known	chr7	+	3533	4	FSM	ENSG00000157224.16	ENST00000496677.6	3533	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	148.963828569966	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTGCTTCTGTTTTTTT	90397727	True	NA	32	True	ATTAAA	-17	NA	90403460	90415954	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_90403550_90405518_90405609_90412006_90412050_90412643
transcript_181072.known	chr7	+	3488	3	FSM	ENSG00000157224.16	ENST00000394605.2	3488	3	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	136	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTGCTTCTGTTTTTTT	90397733	True	NA	32	True	ATTAAA	-17	NA	90403466	90415954	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_90403550_90405518_90405613_90412643
transcript_181073.known	chr7	+	618	3	FSM	ENSG00000157224.16	ENST00000427904.1	618	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	123.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATAGTGCAGGTTGCCAC	90397833	False	NA	NA	False	NA	NA	NA	90403566	90413055	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_90403683_90405518_90405609_90412643
transcript_181074.known	chr7	+	7489	10	FSM	ENSG00000105793.16	ENST00000222511.11	7489	10	0	0	0	0	multi-exon	TRUE	canonical	3	79	junction_4	16.4976616375222	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCCTCTCGAAATATCTT	90344530	True	NA	2	True	AATAAA	-17	NA	90346715	90391453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_90346775_90352815_90353010_90354457_90354550_90355085_90355231_90372154_90372229_90374301_90374355_90377506_90377615_90378133_90378212_90382955_90383080_90384891
transcript_181080.known	chr7	+	5171	15	FSM	ENSG00000058091.17	ENST00000380050.8	5171	15	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_13	15.3888377251374	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTCTAGGTACATCTTC	90594973	True	NA	15	True	AATAAA	-20	NA	90596320	91210590	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_90596719_90604217_90604250_90726566_90726813_90747680_90747776_90790572_90790653_90863174_90863270_90899290_90899354_90917600_90917725_90955696_90955818_90984147_90984242_91045896_91045961_91079431_91079481_91112541_91112682_91118064_91118209_91207164
transcript_181089.nnic	chr7	+	1725	9	NNC	ENSG00000058091.17	novel	5171	15	NA	NA	-201	-6178	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_8	67.267655674923	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTTTCAGTGTCTTCTG	90595169	False	NA	NA	False	AATAAA	-17	NA	90596119	90949615	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_90596719_90604217_90604250_90726566_90726813_90747680_90747776_90790572_90790653_90863174_90863270_90899290_90899354_90917600_90917725_90949224
transcript_18109.known	chr1	-	661	3	FSM	ENSG00000174307.7	ENST00000485436.1	661	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCAGTCCCCCATGGGGT	-201468556	False	17	NA	False	NA	NA	NA	201468581	201465852	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_201466179_201467485_201467584_201468344
transcript_181099.known	chr7	-	554	3	FSM	ENSG00000127989.14	ENST00000442961.1	554	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	79	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAACGTTCTCCTGAAT	-91878832	True	NA	NA	False	NA	NA	NA	91880690	91874317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_91874765_91880054_91880114_91880642
transcript_181100.known	chr7	+	12357	49	FSM	ENSG00000127914.19	ENST00000680513.1	12357	49	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_19	20.4330610198005	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATTTGAACCTTCTTCA	91938027	True	NA	23	True	AATAAA	-25	NA	91940839	92110673	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_91941148_91973710_91973969_91980288_91980334_91992157_91992212_91992884_91993056_91994620_91994777_91995602_91995801_92000847_92003236_92012428_92012643_92014248_92014329_92016128_92016268_92017016_92017103_92022237_92022353_92022813_92023010_92029894_92029992_92031511_92031605_92038418_92038773_92040673_92040899_92042667_92042772_92045007_92045214_92052725_92052959_92061259_92061423_92062273_92062487_92065230_92065464_92066426_92066547_92070029_92070207_92070904_92071010_92076854_92077008_92077695_92077876_92079078_92080153_92082521_92082663_92083169_92083656_92084639_92084704_92084818_92084941_92085494_92085687_92086227_92086417_92089384_92089530_92093096_92093317_92095022_92095174_92096688_92097358_92097585_92097795_92098108_92098215_92099686_92099870_92100855_92101057_92102593_92102827_92105677_92105764_92107292_92107423_92108493_92108634_92110121
transcript_18111.known	chr1	-	2749	2	FSM	ENSG00000174307.7	ENST00000367311.5	2749	2	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTGATCAATTGGTGAT	-201467462	True	NA	NA	False	NA	NA	NA	201469188	201464277	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_201466179_201468340
transcript_181115.nic	chr7	+	1825	8	ISM	ENSG00000127914.19	ENST00000680074.1	10080	26	-570	69863	-532	4898	5prime_fragment	TRUE	canonical	3	26	junction_6	3.79580864445326	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCTTGAGCTAAAGGATAAA	91940277	True	NA	NA	False	ATTAAA	-30	NA	91940307	92000950	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_91941148_91973710_91973969_91980288_91980334_91992157_91992212_91992884_91993056_91994620_91994777_91995602_91995801_92000847
transcript_181118.known	chr7	+	1356	7	FSM	ENSG00000127914.19	ENST00000394564.5	1356	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_6	3.49602949390051	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTTTTGTCATTTATAA	91938113	True	NA	NA	False	AATACA	-15	NA	91940925	91996052	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_91941148_91973710_91973969_91980288_91980334_91992157_91992212_91992884_91993056_91994620_91994777_91995602
transcript_181122.nic	chr7	+	364	2	ISM	ENSG00000127914.19	ENST00000394564.5	1356	7	-66	22266	0	-22266	5prime_fragment	FALSE	canonical	3	34	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTCAAGCAGTAAACATGAT	91938047	True	NA	33	True	AAAAAG	-8	NA	91940859	91973786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_91941148_91973710
transcript_181123.known	chr7	-	3155	10	FSM	ENSG00000001630.18	ENST00000003100.13	3155	10	0	0	0	0	multi-exon	FALSE	canonical	3	689	junction_9	72.5260276821916	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTCTGTATTCATGAAT	-92119143	True	NA	NA	False	ATTAAA	-17	NA	92134477	92112152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_92113844_92117043_92117213_92118519_92118616_92123119_92123316_92123733_92123854_92126252_92126428_92127504_92127632_92128879_92129057_92131773_92131873_92134172
transcript_181124.known	chr7	-	1729	10	FSM	ENSG00000001630.18	ENST00000450723.5	1729	10	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_9	230.758866180668	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGATCTAGGTAATTGGC	-92134792	False	NA	63	True	NA	NA	NA	92134803	92113411	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_92113844_92117043_92117213_92118519_92118616_92123119_92123316_92123733_92123854_92126252_92126428_92127504_92127632_92128879_92129057_92131773_92131873_92134665
transcript_181132.nic	chr7	-	729	4	ISM	ENSG00000001630.18	ENST00000003100.13	3155	10	-59	15390	-33	-13849	5prime_fragment	FALSE	canonical	3	689	junction_3	84.5629285732755	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATACTTTGAGAGTTGGG	-92134525	False	NA	NA	False	AAAAAG	-8	NA	92134536	92127542	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_92127632_92128879_92129057_92131773_92131873_92134172
transcript_181135.known	chr7	+	6340	20	FSM	ENSG00000001629.10	ENST00000265742.8	6340	20	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_2	16.069792380327	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCATTTTGTCTCATTAC	92244817	True	NA	21	True	ATTAAA	-19	NA	92245973	92401383	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_92246520_92294888_92295167_92307358_92307657_92319329_92319513_92327782_92327901_92343023_92343233_92344977_92345067_92350949_92351095_92352475_92352643_92362184_92362274_92371476_92371608_92386508_92386644_92387797_92387885_92387974_92388042_92389970_92390117_92391165_92391345_92392240_92392293_92396364_92396477_92397722_92397860_92398211
transcript_18115.known	chr1	+	13091	30	FSM	ENSG00000134369.16	ENST00000367296.8	13091	30	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_17	30.1971327315705	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGTTCTCTAGCTCCCT	201647904	False	NA	16	True	AATAAA	-19	NA	201648248	201826969	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_201649426_201712816_201712920_201718389_201718756_201780420_201780560_201781011_201781310_201782175_201782870_201783405_201783853_201785309_201785352_201786428_201786578_201788467_201788639_201789739_201789793_201790553_201790578_201790688_201790767_201793791_201793876_201794465_201794578_201803592_201803715_201804488_201804498_201807952_201808150_201808417_201808611_201808702_201808872_201809163_201809262_201809441_201809538_201809945_201810106_201810522_201810759_201811602_201811758_201811902_201811975_201812464_201812662_201813139_201813259_201817087_201817286_201819836
transcript_181152.known	chr7	-	855	7	ISM	ENSG00000001631.17	ENST00000690529.1	3829	18	0	36159	0	665	5prime_fragment	FALSE	canonical	0	0	junction_5	37.2174540892964	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGATAAAAACTAATGTCATA	-92243240	True	NA	NA	False	NA	NA	NA	92245920	92235578	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_92235647_92236412_92236543_92237666_92237760_92240992_92241153_92242033_92242138_92245426_92245596_92245789
transcript_181156.known	chr7	-	665	3	ISM	ENSG00000001631.17	ENST00000452773.6	324	4	11	-21	-1	21	intron_retention	FALSE	canonical	0	0	junction_2	33	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGGCAACAGTGAAATAAC	-92243235	True	NA	NA	False	AAAAAG	-31	NA	92245915	92241080	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_92241153_92242033_92242138_92245426
transcript_181160.known	chr7	-	4369	24	FSM	ENSG00000127980.16	ENST00000248633.9	4369	24	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_11	21.2243395607981	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATTATCTGTTCTTTGT	-92525361	True	NA	-7	True	AATAAA	-20	NA	92528520	92487024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_92487542_92489292_92489424_92489713_92489912_92491271_92491503_92492952_92493130_92494292_92494397_92494486_92494630_92496712_92496778_92499703_92499839_92501506_92501674_92501889_92502080_92503040_92503196_92504731_92504903_92506247_92506345_92506993_92507127_92509328_92509412_92510943_92511048_92511579_92511704_92513847_92513968_92517275_92518043_92518140_92518256_92518994_92519079_92522101_92522246_92528306
transcript_181163.known	chr7	-	3681	23	FSM	ENSG00000127980.16	ENST00000428214.5	3681	23	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_12	36.397484246911	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATACTTCTTTTTGATTT	-92525276	True	NA	NA	False	NA	NA	NA	92528435	92487456	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_92487542_92489292_92489424_92489713_92489912_92491271_92491503_92492952_92493130_92494292_92494397_92494486_92494630_92496712_92496778_92499703_92499839_92501506_92501674_92501889_92502080_92503040_92503196_92506247_92506345_92506993_92507127_92509328_92509412_92510943_92511048_92511579_92511704_92513847_92513968_92517275_92518043_92518140_92518256_92518994_92519079_92522101_92522246_92528306
transcript_181165.known	chr7	-	3329	21	FSM	ENSG00000127980.16	ENST00000438045.5	3329	21	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_19	37.9552367928327	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTGTTCTTTGTATATC	-92525282	True	NA	-2	True	AATAAA	-25	NA	92528441	92487019	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_92487542_92489292_92489424_92489713_92489912_92491271_92491503_92492952_92493130_92494292_92494397_92494486_92494630_92496712_92496778_92499703_92499839_92501506_92501674_92501889_92502080_92503040_92503196_92504731_92504903_92506247_92506345_92506993_92507127_92509328_92509412_92510943_92511048_92511579_92511704_92513847_92513968_92522101_92522246_92528306
transcript_181168.known	chr7	+	1716	6	FSM	ENSG00000157259.8	ENST00000645746.1	1716	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	49.8822613761646	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCTCCAGCCTGGGCAA	92445451	True	NA	NA	False	NA	NA	NA	92447502	92457119	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_92447979_92448751_92448878_92449091_92449214_92450700_92450761_92454501_92454686_92456371
transcript_181170.known	chr7	+	4571	5	FSM	ENSG00000157259.8	ENST00000287957.5	4571	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_2	9.75961064797157	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAAACCATTCCAGTTCC	92445430	True	NA	NA	False	AATAAA	-29	NA	92447481	92460075	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_92447979_92448751_92448878_92450700_92450761_92454501_92454686_92456371
transcript_181183.known	chr7	+	4667	5	FSM	ENSG00000127993.16	ENST00000265732.10	4667	5	0	0	0	0	multi-exon	TRUE	canonical	3	104	junction_3	21.7600551469889	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATACATAAAAAATTATTTA	92527468	True	NA	NA	False	AATAAA	-26	NA	92528794	92540481	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_92528925_92529475_92529667_92532403_92532550_92534401_92534971_92536850
transcript_181187.nic	chr7	-	2363	11	NIC	ENSG00000234545.8	novel	2434	12	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	228.541134153132	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGTGTTCTTATCAGCT	-92587155	False	NA	-16	True	AATAAA	-20	NA	92590417	92560792	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_92562369_92566009_92566062_92569822_92569916_92575770_92575822_92577102_92577196_92577654_92577718_92578149_92578183_92578318_92578394_92579316_92579396_92581505_92581604_92590267
transcript_181189.nic	chr7	-	2019	11	NIC	ENSG00000234545.8	novel	1890	11	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	228.541134153132	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCCAGAATCTTAGTAAAT	-92587155	False	NA	-124	True	NA	NA	NA	92590417	92561136	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_92562369_92566009_92566062_92569822_92569916_92575770_92575822_92577102_92577196_92577654_92577718_92578149_92578183_92578318_92578394_92579316_92579396_92581505_92581604_92590267
transcript_181195.nic	chr7	-	747	10	ISM	ENSG00000234545.8	ENST00000445716.6	2367	11	-27	5292	-24	0	5prime_fragment	FALSE	canonical	3	204	junction_1	176.543353189962	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAGAAAAGCAGTGAAGA	-92587155	False	NA	-41	True	TTTAAA	-21	NA	92590417	92566049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_92566062_92569822_92569916_92575770_92575822_92577102_92577196_92577654_92577718_92578149_92578183_92578318_92578394_92579316_92579396_92581505_92581604_92590267
transcript_181199.nic	chr7	-	641	8	ISM	ENSG00000234545.8	ENST00000445716.6	2367	11	-27	15014	-24	2547	5prime_fragment	FALSE	canonical	3	305	junction_3	142.242965465747	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAACTATACTTTTACATT	-92587155	False	NA	NA	False	AAAAAG	-36	NA	92590417	92575771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_92575822_92577102_92577196_92577654_92577718_92578149_92578183_92578318_92578394_92579316_92579396_92581505_92581604_92590267
transcript_1812.nic	chr1	-	2453	15	ISM	ENSG00000116198.14	ENST00000461667.2	3328	20	6	6541	-2	375	5prime_fragment	FALSE	canonical	3	66	junction_8	11.0465157495059	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTACAAGGGCAGCTGGC	-3853985	True	NA	-52	True	AATAAA	-2	NA	3857227	3829316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_3829374_3829790_3829998_3831045_3831223_3833861_3834036_3834924_3835093_3836494_3836693_3837291_3837520_3838963_3839120_3839607_3839777_3844906_3844984_3845288_3845352_3847474_3847614_3848607_3848782_3852294_3852422_3856888
transcript_181203.nic	chr7	-	402	4	ISM	ENSG00000234545.8	ENST00000481407.5	2293	9	-27	17103	-24	0	5prime_fragment	FALSE	canonical	3	582	junction_1	46.0169051062276	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATACCACTTTTAGTTTA	-92587155	False	NA	0	True	AAAAAG	-5	NA	92590417	92578318	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_92578394_92579316_92579396_92581505_92581604_92590267
transcript_181204.known	chr7	-	410	3	FSM	ENSG00000234545.8	ENST00000480397.5	410	3	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_2	8.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAAATACCTTAA	-92587076	True	NA	NA	False	NA	NA	NA	92590338	92579154	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_92579396_92581505_92581604_92590267
transcript_181206.known	chr7	-	2367	11	FSM	ENSG00000234545.8	ENST00000445716.6	2367	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	232.249025832187	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAACTTACAAAGATAAAC	-92587128	True	NA	19	True	NA	NA	NA	92590390	92560757	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_92562369_92566013_92566062_92569822_92569916_92575770_92575822_92577102_92577196_92577654_92577718_92578149_92578183_92578318_92578394_92579316_92579396_92581505_92581604_92590267
transcript_181208.known	chr7	-	11663	8	FSM	ENSG00000105810.10	ENST00000424848.3	11663	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	10.9264703862703	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTTTTTTCTTTCTTT	-92834945	True	NA	2	True	ATTAAA	-19	NA	92836573	92604920	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_92615287_92618071_92618208_92623035_92623087_92671425_92671536_92725625_92725794_92774695_92774832_92833090_92833691_92836477
transcript_181209.known	chr7	-	11612	8	FSM	ENSG00000105810.10	ENST00000265734.8	11612	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	19.61361459678	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTTTTTTCTTTCTTT	-92833905	False	1628	2	True	ATTAAA	-19	NA	92833917	92604920	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_92615287_92618071_92618208_92623035_92623087_92671425_92671536_92725625_92725794_92774695_92774832_92833090_92833691_92833872
transcript_181217.nic	chr7	-	2558	7	ISM	ENSG00000105810.10	ENST00000265734.8	11612	8	-295	9531	-295	262	intron_retention	FALSE	canonical	3	60	junction_4	4.6785562825394	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAGTATATTTTAAGAGA	-92834200	False	NA	16	True	AGTAAA	-39	NA	92834212	92614451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_92615287_92618071_92618208_92623035_92623087_92671425_92671536_92725625_92725794_92774695_92774832_92833090
transcript_18122.nic	chr1	+	1688	3	ISM	ENSG00000134369.16	ENST00000367296.8	13091	30	381	107791	381	-79430	5prime_fragment	FALSE	canonical	3	42	junction_2	1	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTATTAACATCGTATCTG	201647340	True	NA	NA	False	ACTAAA	-39	NA	201648629	201719178	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_201649426_201712816_201712920_201718389
transcript_181225.known	chr7	+	5684	28	FSM	ENSG00000004766.17	ENST00000305866.10	5684	28	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	6.96099262902528	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGAATTGATGAATACAAG	93231380	True	NA	NA	False	AATAAA	-15	NA	93232365	93361123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_93232501_93239865_93239935_93252652_93252776_93253859_93253932_93256508_93256563_93257393_93257465_93258158_93258277_93258356_93258393_93259549_93259633_93271219_93271263_93272634_93272734_93276164_93276306_93291702_93291836_93294544_93294637_93296741_93296837_93297144_93297244_93303459_93303551_93305827_93306005_93308823_93308943_93311165_93311273_93323610_93323733_93334116_93334198_93341426_93341576_93348710_93348808_93349874_93350034_93353639_93353762_93355890_93356081_93358316
transcript_181227.known	chr7	-	3572	14	FSM	ENSG00000004948.16	ENST00000426151.7	3572	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4.15384615384615	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATCTCGTCTCCTGCTCA	-93574687	True	NA	57	True	AATATA	-20	NA	93574724	93424485	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_93426590_93434252_93434295_93435951_93436171_93438059_93438127_93438209_93438271_93443603_93443758_93460820_93460948_93468714_93468807_93472374_93472488_93477557_93477669_93479353_93479508_93486930_93487008_93574288_93574507_93574691
transcript_181228.known	chr7	-	2207	5	FSM	ENSG00000105825.14	ENST00000222543.11	2207	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	10.280442597476	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTTTAAGCATTCAAACC	-93890296	True	NA	NA	False	AATAAA	-13	NA	93890753	93885395	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_93886897_93887260_93887432_93889034_93889224_93890136_93890320_93890590
transcript_181233.known	chr7	-	1144	5	FSM	ENSG00000105825.14	ENST00000650573.1	1144	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	26.7861904719577	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACATATTTGAGAATAAAA	-93890290	True	NA	-55	True	AATATA	-13	NA	93890747	93886470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_93886897_93887260_93887432_93889016_93889224_93890136_93890320_93890590
transcript_181234.known	chr7	+	3019	2	FSM	ENSG00000127920.6	ENST00000248564.6	3019	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTAGTGAGACTTAGGT	93921641	True	NA	NA	False	ATTAAA	-16	NA	93921734	93928610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_93922234_93926090
transcript_181237.known	chr7	-	1481	4	FSM	ENSG00000105829.13	ENST00000222547.8	1481	4	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_2	11.6714276000077	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTCTTTAAGTCTCTTT	-94000060	True	NA	-7	True	AATAAA	-19	NA	94004355	93993244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_93994386_93996264_93996322_93999169_93999295_94004197
transcript_181240.known	chr7	+	5072	52	FSM	ENSG00000164692.19	ENST00000297268.11	5072	52	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	95.1748466862604	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATTGAGTAAAATTCCTT	94392613	True	NA	NA	False	AATAAA	-45	NA	94394894	94431227	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_94395102_94397747_94397759_94398381_94398397_94399048_94399085_94400195_94400289_94401566_94401621_94404555_94404601_94404692_94404747_94404838_94404893_94405198_94405253_94405672_94405727_94406249_94406304_94407846_94407892_94408182_94408237_94408335_94408381_94408769_94408824_94409321_94409421_94409563_94409609_94409722_94409822_94410241_94410296_94410419_94410528_94410888_94410943_94411055_94411155_94412067_94412122_94412583_94412683_94413082_94413137_94413689_94413744_94413893_94413948_94414221_94414276_94415225_94415271_94416404_94416504_94417723_94417832_94418498_94418553_94419497_94419552_94420232_94420287_94420390_94420445_94420540_94420649_94421008_94421063_94421898_94421953_94422956_94423119_94424335_94424444_94425116_94425225_94425609_94425664_94425749_94425858_94425997_94426052_94426422_94426531_94427007_94427062_94427187_94427296_94427626_94427886_94428292_94428478_94429187_94429431_94430246
transcript_181243.known	chr7	+	4523	52	NNC	ENSG00000164692.19	novel	5072	52	NA	NA	19	15	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	98.2266795956711	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACTTGTGGCTTTTGAAT	94392632	True	NA	21	True	AATAAA	-31	NA	94394913	94430703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_94395102_94398373_94398379_94398381_94398397_94399048_94399085_94400195_94400289_94401566_94401621_94404555_94404601_94404692_94404747_94404838_94404893_94405198_94405253_94405672_94405727_94406249_94406304_94407846_94407892_94408182_94408237_94408335_94408381_94408769_94408824_94409321_94409421_94409563_94409609_94409722_94409822_94410241_94410296_94410419_94410528_94410888_94410943_94411055_94411155_94412067_94412122_94412583_94412683_94413082_94413137_94413689_94413744_94413893_94413948_94414221_94414276_94415225_94415271_94416404_94416504_94417723_94417832_94418498_94418553_94419497_94419552_94420232_94420287_94420390_94420445_94420540_94420649_94421008_94421063_94421898_94421953_94422956_94423119_94424335_94424444_94425116_94425225_94425609_94425664_94425749_94425858_94425997_94426052_94426422_94426531_94427007_94427062_94427187_94427296_94427626_94427886_94428292_94428478_94429187_94429431_94430246
transcript_181254.known	chr7	-	1686	12	FSM	ENSG00000127990.19	ENST00000646559.1	1686	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_11	77.1183484614491	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTTGATCTTTAAAATAA	-94652823	True	NA	NA	False	AAAACA	-27	NA	94656173	94585263	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94629718_94629842_94644605_94644668_94655989
transcript_181255.known	chr7	-	1868	11	FSM	ENSG00000127990.19	ENST00000648936.2	1868	11	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_4	24.7919341722263	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGGATTGTGAAACTG	-94652783	True	NA	NA	False	AATAAA	-6	NA	94656133	94584979	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94629718_94629842_94655989
transcript_181256.known	chr7	-	1532	10	FSM	ENSG00000127990.19	ENST00000437425.7	1532	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_9	62.845489540265	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGAAGCCTAATGACTGG	-94652827	True	NA	NA	False	AATAAA	-26	NA	94656177	94585236	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94655989
transcript_181257.known	chr7	-	1566	11	FSM	ENSG00000127990.19	ENST00000646098.1	1566	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	65.0323765519914	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTGATGACTTTATATT	-94652819	True	NA	NA	False	NA	NA	NA	94656169	94585293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618933_94623324_94623398_94628201_94628360_94629718_94629842_94655989
transcript_181258.known	chr7	-	1692	9	FSM	ENSG00000127990.19	ENST00000643128.1	1692	9	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_2	9.61444226151471	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTTTGTAATCTAAATTT	-94652795	True	NA	NA	False	ATTAAA	-15	NA	94656145	94598382	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94629718_94629842_94655989
transcript_181260.known	chr7	+	3931	18	FSM	ENSG00000127995.17	ENST00000297273.9	3931	18	0	0	0	0	multi-exon	TRUE	canonical	3	122	junction_9	19.4466709331089	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGGATCCATTCATGATT	94509197	True	NA	39	True	ATTAAA	-24	NA	94509808	94557019	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_94510218_94517559_94517657_94518202_94518324_94527161_94527207_94528187_94528251_94533204_94533250_94533678_94533803_94535308_94535524_94537471_94537895_94538966_94539057_94544410_94544531_94545544_94545702_94547095_94547176_94549532_94549635_94551337_94551479_94552349_94552428_94554482_94554576_94555491
transcript_181268.known	chr7	+	6394	2	FSM	ENSG00000242265.6	ENST00000615790.5	6394	2	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_1	0	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTCCTGATCATTT	94656527	False	NA	25	True	AATAAA	-30	NA	94656545	94669692	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_94656581_94663333
transcript_181269.known	chr7	+	2587	2	FSM	ENSG00000242265.6	ENST00000488574.5	2587	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGATCTCTGCCCTCAAA	94647169	True	NA	NA	False	NA	NA	NA	94656369	94665698	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_94656592_94663333
transcript_181279.nic	chr7	+	2751	10	ISM	ENSG00000158528.12	ENST00000424654.5	4058	18	-133	38550	-52	-38550	5prime_fragment	FALSE	canonical	1	5	junction_2	2.66666666666667	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAGATTTGGAAAAAGCT	94907353	False	NA	NA	False	AAGAAA	-6	NA	94907541	95251805	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_94907703_94909897_94911509_95111258_95111392_95120711_95120833_95161866_95161972_95198348_95198485_95225960_95226117_95247472_95247527_95250025_95250256_95251761
transcript_181284.nic	chr7	+	2654	9	ISM	ENSG00000158528.12	ENST00000424654.5	4058	18	-248	40268	-167	-40268	5prime_fragment	FALSE	canonical	1	5	junction_2	2.72717802865893	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CATAGAAGAGAATAAGGAAA	94907238	False	NA	NA	False	NA	NA	NA	94907426	95250087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_94907703_94909897_94911509_95111258_95111392_95120711_95120833_95161866_95161972_95198348_95198485_95225960_95226117_95247472_95247527_95250025
transcript_181287.known	chr7	-	1726	9	FSM	ENSG00000105854.13	ENST00000433091.6	1726	9	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_5	90.6862723900371	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACTAACTAAAATCCCAGT	NA	False	NA	NA	False	ATTAAA	-19	NA	95435198	95404879	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_95405489_95406118_95406248_95406986_95407069_95409900_95410102_95411652_95411744_95412311_95412478_95416241_95416298_95424514_95424586_95434877
transcript_181290.known	chr7	-	1876	9	FSM	ENSG00000105854.13	ENST00000633192.1	1876	9	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_6	41.821047332653	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTGGAGTTATATTAAAGA	NA	False	NA	NA	False	ATTAAA	-2	NA	95435329	95404896	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_95405489_95406118_95406248_95406986_95407069_95409900_95410102_95411652_95411780_95412311_95412478_95416241_95416298_95424514_95424586_95434877
transcript_181292.known	chr7	-	1515	9	FSM	ENSG00000105854.13	ENST00000455123.5	1515	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	105.952819688765	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCAGTTTTGTCTGTGTTT	-95431736	True	NA	NA	False	ATTAAA	-32	NA	95434991	95404866	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_95405489_95406118_95406248_95406986_95407069_95409953_95410102_95411652_95411780_95412311_95412478_95416241_95416298_95424514_95424586_95434877
transcript_181299.known	chr7	-	579	3	FSM	ENSG00000105854.13	ENST00000493469.5	579	3	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_1	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCAAGCAATTCTTTTGC	-95431708	True	NA	NA	False	NA	NA	NA	95434963	95415875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_95416298_95424514_95424586_95434877
transcript_181300.nic	chr7	+	2537	13	NIC	ENSG00000158560.14	novel	774	7	NA	NA	-161	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_2	2.52762514801718	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGCACCAGTGTGAGTA	NA	False	NA	2	True	AATAAA	-14	NA	95837456	96098424	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_95837650_95869882_95869999_95977511_95977602_95984814_95984978_95987055_95987156_95995947_95996074_96028174_96028322_96032666_96032781_96035618_96035753_96039276_96039422_96076056_96076198_96080362_96080489_96097482
transcript_181303.known	chr7	-	3192	18	FSM	ENSG00000004864.14	ENST00000416240.6	3192	18	0	0	0	0	multi-exon	TRUE	canonical	2	13	junction_9	101.488915650922	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGAGTTGTTTGGTCTTGT	-96316320	True	NA	-4	True	AATAAA	-15	NA	96322147	96120220	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_96121378_96121654_96121746_96121838_96121998_96131742_96131882_96146555_96146697_96170044_96170126_96171471_96171525_96184276_96184436_96184926_96185015_96189293_96189379_96189580_96189675_96191108_96191248_96193036_96193184_96208837_96208978_96234801_96234918_96277195_96277339_96296897_96296952_96321941
transcript_181311.nic	chr7	-	674	5	ISM	ENSG00000004864.14	ENST00000416240.6	3192	18	-53	88655	-53	-15728	5prime_fragment	FALSE	canonical	3	394	junction_1	6.33936116655298	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACCTGACATATGCGGAA	NA	False	NA	21	True	AAGAAA	-7	NA	96322200	96208875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_96208978_96234801_96234918_96277195_96277339_96296897_96296952_96321941
transcript_181313.known	chr7	-	1314	3	FSM	ENSG00000127922.10	ENST00000248566.4	458	3	-45	-811	-11	811	multi-exon	FALSE	canonical	3	7023	junction_1	367	965	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGAGCATAAATATGTTT	-96654325	True	NA	NA	False	AATACA	-19	NA	96709891	96687950	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_96688967_96694797_96694892_96709687
transcript_181315.known	chr7	+	731	3	FSM	ENSG00000196636.8	ENST00000360382.4	731	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGCCATATTAGTCTTCT	97110893	True	NA	NA	False	TTTAAA	-13	NA	97117722	97181487	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_97117898_97136387_97136468_97181011
transcript_181317.known	chr7	+	952	2	FSM	ENSG00000196636.8	ENST00000432641.3	952	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTTTCCTCCAGTGTTTG	97110868	True	NA	16	True	AATAAA	-16	NA	97117697	97181763	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_97117898_97181011
transcript_181318.known	chr7	+	1061	7	FSM	ENSG00000006128.12	ENST00000319273.10	1061	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	2.7938424357067	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTTGTCACATGTCTTT	97732057	True	NA	NA	False	AATAAA	-18	NA	97732085	97740472	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_97732196_97732603_97732736_97733722_97733820_97734247_97734293_97734825_97734850_97736298_97736353_97739873
transcript_181326.known	chr7	-	1812	13	FSM	ENSG00000070669.17	ENST00000444334.5	1812	13	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_11	145.233337158595	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGGTAGATAGGGGAACAA	-97867125	True	NA	-81	True	NA	NA	NA	97872436	97852203	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854681_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97868907_97869106_97869777_97869814_97872350
transcript_181328.known	chr7	-	2385	13	FSM	ENSG00000070669.17	ENST00000394308.8	2385	13	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_7	62.3204086422204	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGGCTTTGTGGACCTC	-97867097	True	NA	NA	False	AATAAA	-18	NA	97872408	97851676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854681_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97868907_97869180_97869777_97869814_97872350
transcript_18133.known	chr1	+	11416	24	FSM	ENSG00000198700.10	ENST00000361565.9	11416	24	0	0	0	0	multi-exon	FALSE	canonical	2	592	junction_8	87.5818170009457	370	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTCGTAGTGCTGCCTC	201814733	True	NA	6	True	AATAAA	-17	NA	201829156	201884291	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_201829373_201847278_201847341_201847551_201847639_201848392_201848595_201852103_201852193_201853010_201853098_201854594_201854715_201854822_201854924_201855123_201855183_201855782_201855935_201857095_201857195_201858446_201858554_201858854_201858995_201863447_201863608_201866732_201866960_201868647_201868797_201869589_201869719_201870582_201870859_201871160_201871328_201872827_201872962_201874249_201874373_201874831_201874937_201875151_201875229_201875943
transcript_181333.known	chr7	-	1588	11	FSM	ENSG00000070669.17	ENST00000455086.5	1588	11	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_10	167.575684393649	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAAAGTCCTAAATC	-97867083	True	NA	-29	True	NA	NA	NA	97872394	97852151	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854681_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97872350
transcript_181339.nnic	chr7	-	715	4	Fusion	ENSG00000243554.1_ENSG00000183444.10	novel	447	6	NA	NA	-90	-507	multi-exon	FALSE	canonical	3	83	junction_1	24.2257897474755	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTCTAGTTTTGTTGTCT	-97969409	True	NA	-17	True	NA	NA	NA	97972344	97966596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr7_-_97966978_97969004_97969053_97969769_97969846_97972134
transcript_181344.known	chr7	+	8974	14	FSM	ENSG00000164715.6	ENST00000297293.6	8974	14	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_7	7.36535950989897	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCCGCGTTTCTTCTGTG	98104321	True	NA	NA	False	AATAAA	-26	NA	98106861	98209638	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_98107281_98137314_98137443_98141396_98141542_98151381_98151456_98154757_98154877_98159337_98159426_98171540_98171675_98185050_98185136_98186876_98186999_98190727_98190878_98191613_98194573_98203573_98203707_98203943_98204187_98205463
transcript_181352.known	chr7	-	6545	26	FSM	ENSG00000205356.10	ENST00000447648.7	6545	26	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_24	6.61948638490933	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTCAGCCGGAAACAAGAG	-98251699	True	NA	NA	False	NA	NA	NA	98252232	98214623	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_98217504_98217691_98217812_98217935_98218043_98221660_98221754_98222385_98222522_98222989_98223171_98223661_98223719_98224800_98224881_98225005_98225103_98228013_98228117_98229038_98229167_98230960_98231119_98231223_98231374_98231803_98231960_98232826_98232973_98233420_98233912_98236775_98236922_98238508_98238611_98240850_98240952_98241069_98241245_98243466_98243593_98244570_98244694_98244884_98245068_98245921_98246166_98251393_98251549_98252125
transcript_181365.known	chr7	+	3262	2	FSM	ENSG00000180535.4	ENST00000609256.2	3262	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGGGAACCACGCGTTTT	98211250	True	NA	20	True	AATAAA	-30	NA	98211438	98215457	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_98211499_98212255
transcript_181367.known	chr7	-	3645	14	FSM	ENSG00000006453.14	ENST00000005260.9	3645	14	0	0	0	0	multi-exon	TRUE	canonical	3	145	junction_9	19.8592681774626	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTGAGCTGTAAGCGC	-98395618	True	NA	-14	True	AATAAA	-17	NA	98401090	98291649	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_98293597_98294073_98294112_98304195_98304377_98306438_98306517_98307688_98307897_98310444_98310593_98312096_98312265_98315459_98315613_98317218_98317357_98320057_98320130_98320236_98320299_98355041_98355129_98362356_98362433_98400801
transcript_181379.nic	chr7	-	2926	11	ISM	ENSG00000006453.14	ENST00000005260.9	3645	14	-56	13398	-56	-852	5prime_fragment	FALSE	canonical	3	145	junction_6	20.2326468856648	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAAACAAAAAAATTAGC	NA	False	NA	NA	False	ACTAAA	-21	NA	98401146	98305047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_98306517_98307688_98307897_98310444_98310593_98312096_98312265_98315459_98315613_98317218_98317357_98320057_98320130_98320236_98320299_98355041_98355129_98362356_98362433_98400801
transcript_181387.known	chr7	+	790	3	FSM	ENSG00000164713.10	ENST00000297290.4	790	3	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	7	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGCTTTCAGAGACCCAG	98271723	True	NA	45	True	AATAAA	-38	NA	98281685	98291545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_98281938_98282350_98282454_98291110
transcript_181388.known	chr7	+	667	3	FSM	ENSG00000164713.10	ENST00000456357.6	667	3	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_1	85.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACCTGGTGCTGCTTAC	98252124	True	NA	24	True	AATAAA	-17	NA	98252378	98291524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_98252529_98282350_98282454_98291110
transcript_181392.known	chr7	+	2713	5	FSM	ENSG00000106236.4	ENST00000265634.4	2713	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	7.63216876123687	193	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTGTTTGTCTTCCTC	98617119	True	NA	8	True	ATTAAA	-16	NA	98617284	98629869	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_98617888_98619642_98619860_98624921_98625167_98627164_98627345_98628401
transcript_181394.known	chr7	-	2881	8	FSM	ENSG00000166448.15	ENST00000416379.6	2881	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4.74664220738176	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTGTGGCCAGAGTCTCTC	-98869844	False	NA	1	True	AATAAA	-33	NA	98869866	98846487	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_98848245_98848582_98848696_98851420_98851624_98855239_98855325_98856016_98856184_98860178_98860339_98863094_98863401_98869776
transcript_181395.known	chr7	-	2991	8	FSM	ENSG00000166448.15	ENST00000339375.9	2991	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	3.53409053624371	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGTGTGGCCAGAGTCTC	-98869905	True	NA	-1	True	AATAAA	-31	NA	98870014	98846489	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_98848209_98848582_98848696_98851420_98851624_98855239_98855325_98856016_98856184_98860178_98860339_98863094_98863401_98869776
transcript_181397.known	chr7	+	12675	73	FSM	ENSG00000196367.14	ENST00000456197.2	12675	73	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_31	43.0659821604529	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTCCCTTGTTTATG	98872309	True	NA	82	True	AATAAA	-16	NA	98878531	99013241	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_98878638_98881089_98881251_98881974_98882025_98890334_98890446_98892423_98892529_98893797_98893882_98895763_98895821_98897740_98897867_98899421_98899500_98899678_98899768_98900623_98900721_98903378_98903518_98906176_98906256_98908727_98908963_98910055_98910420_98910509_98910608_98911076_98911272_98912021_98912214_98915722_98915889_98917422_98917680_98921752_98921954_98925111_98925264_98927166_98927367_98929988_98930207_98930632_98930831_98931404_98931666_98933240_98933403_98935578_98935676_98937155_98937278_98937649_98937821_98942948_98943018_98945746_98945801_98945929_98945951_98948220_98948341_98948565_98948686_98949416_98949582_98949659_98949842_98950063_98950263_98950875_98951005_98953166_98953434_98955097_98955305_98956145_98956305_98956398_98956534_98957980_98958092_98959343_98959491_98961260_98961475_98962301_98962428_98964628_98964776_98965695_98965896_98967040_98967163_98967484_98967699_98970111_98970292_98971798_98971946_98976148_98976269_98976482_98976771_98976938_98977077_98978210_98978324_98978768_98978905_98981768_98981961_98983263_98983460_98984092_98984359_98984943_98985045_98988764_98988967_98990454_98990620_98992136_98992228_98993537_98993738_98994586_98994849_99004189_99004416_99005130_99005349_99008376_99008562_99011051_99011256_99011340_99011536_99012070
transcript_181403.known	chr7	-	5737	19	FSM	ENSG00000198742.10	ENST00000361125.1	5737	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	55.3636964886638	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTTTGGCGTCTGTTAT	-99142292	True	NA	-18	True	AATAAA	-12	NA	99144100	99027440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_99030684_99033036_99033122_99035514_99035717_99037066_99037188_99038387_99038526_99040377_99040557_99042117_99042233_99045697_99045802_99047683_99047883_99049562_99049710_99050914_99050993_99051356_99051442_99052204_99052447_99054789_99054866_99057204_99057271_99057417_99057552_99060598_99060708_99061798_99061838_99143725
transcript_181406.nnic	chr7	-	2844	18	NNC	ENSG00000198742.10	novel	5668	18	NA	NA	-52	-2866	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_2	30.1022479014396	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGCTGTGTTGCAACC	-99142352	True	NA	-1	True	AATAAA	-40	NA	99144160	99030306	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_99030684_99033036_99033113_99035514_99035717_99037066_99037188_99038387_99038526_99040377_99040557_99042117_99042233_99045697_99045802_99047683_99047883_99049562_99049710_99051356_99051442_99052204_99052447_99054789_99054866_99057204_99057271_99057417_99057552_99060598_99060708_99061798_99061838_99143725
transcript_181408.known	chr7	-	5668	18	FSM	ENSG00000198742.10	ENST00000361368.7	5668	18	0	0	0	0	multi-exon	TRUE	canonical	3	104	junction_2	20.8832642717464	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTTGGCGTCTGTTATT	-99142300	True	NA	-17	True	AATAAA	-13	NA	99144108	99027439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_99030684_99033036_99033122_99035514_99035717_99037066_99037188_99038387_99038526_99040377_99040557_99042117_99042233_99045697_99045802_99047683_99047883_99049562_99049710_99051356_99051442_99052204_99052447_99054789_99054866_99057204_99057271_99057417_99057552_99060598_99060708_99061798_99061838_99143725
transcript_181417.known	chr7	+	1582	10	FSM	ENSG00000241685.10	ENST00000262942.10	1582	10	0	0	0	0	multi-exon	TRUE	canonical	3	741	junction_7	93.1128347758783	1064	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTTGTTTCCTTGT	99315648	True	NA	8	True	AATAAA	-15	NA	99325897	99366262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99326005_99333324_99333418_99338180_99338286_99344292_99344516_99348851_99348960_99353908_99354122_99358339_99358416_99359544_99359739_99363542_99363634_99365890
transcript_181422.known	chr7	+	1511	10	FSM	ENSG00000130429.15	ENST00000646101.2	1511	10	0	0	0	0	multi-exon	FALSE	canonical	3	640	junction_1	54.9080038690981	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCCTATGTGGAAGGAGA	99365826	True	NA	NA	False	AAAAAG	-15	NA	99374729	99394816	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99374782_99385701_99385779_99386684_99386790_99388038_99388262_99389904_99390013_99390892_99391100_99391177_99391254_99392670_99392877_99394028_99394120_99394450
transcript_181437.known	chr7	-	2604	6	FSM	ENSG00000106244.13	ENST00000350498.8	2604	6	0	0	0	0	multi-exon	FALSE	canonical	3	557	junction_5	96.7752034355909	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCACGTATTCCTTGAATAG	-99361814	True	NA	NA	False	AATAAA	-20	NA	99408597	99394672	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_99396741_99397861_99398014_99400302_99400425_99403397_99403506_99404861_99404954_99408535
transcript_181438.known	chr7	-	767	6	FSM	ENSG00000106244.13	ENST00000426447.3	767	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	302.454624696003	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGGATGGGGGGGGGGA	-99361807	True	NA	NA	False	NA	NA	NA	99408590	99396522	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_99396741_99397861_99398014_99400302_99400425_99403397_99403526_99404861_99404954_99408535
transcript_181441.known	chr7	+	582	5	FSM	ENSG00000130429.15	ENST00000484600.6	582	5	0	0	0	0	multi-exon	FALSE	canonical	3	640	junction_1	74.5788173679363	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGAGGGCGGGGCTGACG	99365826	True	NA	NA	False	NA	NA	NA	99374729	99390029	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99374782_99385701_99385779_99386684_99386790_99388038_99388262_99389904
transcript_181449.known	chr7	+	1556	11	FSM	ENSG00000130429.15	ENST00000455009.6	1556	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	297.233981906511	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCATGAACTGCTTCAAAA	99365803	True	NA	NA	False	NA	NA	NA	99374706	99394732	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99374782_99377333_99377440_99385701_99385779_99386684_99386790_99388038_99388262_99389904_99390013_99390892_99391100_99391177_99391254_99392670_99392877_99394028_99394120_99394450
transcript_181450.known	chr7	-	120	3	FSM	ENSG00000106244.13	ENST00000626285.1	120	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	277.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAGGAAGAAGAGGAGCAA	-99408019	False	NA	NA	False	NA	NA	NA	99408548	99403510	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_99403526_99404861_99404954_99408535
transcript_181458.nnic	chr7	+	1666	9	NNC	ENSG00000160917.15	novel	1738	8	NA	NA	-57	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	294.856638894226	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCATGTCTCATTAATT	NA	False	NA	23	True	ATTAAA	-11	NA	99438864	99457370	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_99439186_99444788_99444840_99448120_99448274_99450275_99450372_99450701_99450796_99452367_99452441_99454040_99454137_99456431_99456767_99456923
transcript_181466.known	chr7	+	1823	8	FSM	ENSG00000160917.15	ENST00000292476.10	1823	8	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_6	201.100441956506	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATGTCTCATTAATTAAG	99434266	True	NA	26	True	ATTAAA	-14	NA	99438942	99457373	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99439186_99444788_99444840_99448120_99448274_99450275_99450372_99450701_99450796_99452367_99452441_99453965_99454137_99456431
transcript_181467.known	chr7	+	1738	8	FSM	ENSG00000160917.15	ENST00000436336.6	1738	8	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_6	151.023987822992	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATGAAATGGATTAAAGC	99438898	False	NA	-5	True	NA	NA	NA	99438921	99457342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99439186_99444788_99444840_99448120_99448274_99450275_99450372_99450701_99450796_99452367_99452441_99454040_99454137_99456431
transcript_181472.known	chr7	+	942	8	FSM	ENSG00000160917.15	ENST00000441580.5	942	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	301.811672594493	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCGAGCTGGCCCGCAGA	99439365	False	NA	NA	False	NA	NA	NA	99439375	99456589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99439597_99444788_99444840_99448120_99448274_99450275_99450372_99450701_99450796_99452367_99452441_99454040_99454137_99456431
transcript_181473.nic	chr7	-	3676	8	NIC	ENSG00000106246.18	novel	5464	8	NA	NA	-470	-2383	combination_of_known_junctions	FALSE	canonical	2	3	junction_7	52.1152568831815	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGTGTGAATGAGTCTCGT	-99439045	True	NA	-14	True	AAAAAG	-4	NA	99439268	99419121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_99420150_99423774_99423958_99424794_99425617_99429102_99429205_99429587_99429807_99433277_99433419_99434789_99435269_99438566
transcript_181485.known	chr7	+	1139	6	FSM	ENSG00000106245.11	ENST00000403633.6	1139	6	0	0	0	0	multi-exon	FALSE	canonical	3	480	junction_1	238.753764368229	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCACGTCTCTTCTTTCA	99407582	True	NA	17	True	AATAAA	-18	NA	99408640	99419616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99409005_99410033_99410170_99411063_99411187_99416137_99416261_99417428_99417596_99419390
transcript_181486.known	chr7	+	1052	6	FSM	ENSG00000106245.11	ENST00000222969.10	1052	6	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_1	287.896925999567	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCACGTCTCTTCTTTCA	99393070	True	NA	17	True	AATAAA	-18	NA	99408968	99419616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99409246_99410033_99410170_99411063_99411187_99416137_99416261_99417428_99417596_99419390
transcript_181501.known	chr7	-	443	4	FSM	ENSG00000241468.8	ENST00000292475.8	443	4	0	0	0	0	multi-exon	FALSE	canonical	3	2700	junction_3	2186.67179877447	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGCTGATTGCCTGCCT	-99437724	True	NA	-36	True	AATAAA	-13	NA	99466167	99458194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_99458356_99459146_99459264_99460085_99460194_99466110
transcript_181502.known	chr7	-	305	4	FSM	ENSG00000241468.8	ENST00000394186.3	305	4	0	0	0	0	multi-exon	FALSE	canonical	3	4480	junction_3	1359.73698437112	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCCACCCCACGACCTTG	-99437718	True	NA	-150	True	NA	NA	NA	99466161	99458308	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_99458356_99459146_99459264_99460085_99460194_99466128
transcript_181504.known	chr7	-	323	3	FSM	ENSG00000241468.8	ENST00000359832.8	323	3	0	0	0	0	multi-exon	FALSE	canonical	3	464	junction_1	1118	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGCTGATTGCCTGCCT	-99437721	True	NA	-36	True	AATAAA	-13	NA	99466164	99458194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_99458356_99460085_99460194_99466110
transcript_181505.known	chr7	-	306	3	FSM	ENSG00000241468.8	ENST00000488775.5	306	3	0	0	0	0	multi-exon	FALSE	canonical	3	464	junction_1	2008	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTGTGCTGATTGCCTGC	-99437724	True	NA	-38	True	AATAAA	-11	NA	99466167	99458196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_99458356_99460085_99460194_99466128
transcript_181510.known	chr7	-	597	2	FSM	ENSG00000241468.8	ENST00000485011.1	597	2	0	0	0	0	multi-exon	FALSE	canonical	3	4480	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCTTGAGCCGAGTTTAG	-99437743	True	NA	NA	False	NA	NA	NA	99466186	99459654	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_99460194_99466128
transcript_181513.known	chr7	+	4344	7	FSM	ENSG00000196652.12	ENST00000394170.6	4344	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_4	28.6860399652669	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTCTGAATCCCTGTC	99504779	False	NA	11	True	AATAAA	-16	NA	99504949	99533822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99505161_99506004_99506459_99512452_99512592_99519826_99519910_99520168_99520305_99525812_99526419_99531107
transcript_181518.nic	chr7	+	3747	6	ISM	ENSG00000196652.12	ENST00000451158.5	3111	7	573	0	-6	0	3prime_fragment	FALSE	canonical	3	42	junction_3	29.2068485119501	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTCTGTTTTGGTACCT	99504574	False	NA	9	True	AGTAAA	-15	NA	99505247	99532679	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_99506459_99512452_99512592_99519826_99519910_99520168_99520305_99525812_99526419_99531107
transcript_181519.nic	chr7	+	4525	6	ISM	ENSG00000196652.12	ENST00000394170.6	4344	7	298	365	-6	-365	3prime_fragment	FALSE	canonical	3	42	junction_3	29.2068485119501	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTTGTACACTGTGGT	99504574	False	NA	25	True	AATAAA	-25	NA	99505247	99533457	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_99506459_99512452_99512592_99519826_99519910_99520168_99520305_99525812_99526419_99531107
transcript_181520.nic	chr7	+	4890	6	ISM	ENSG00000196652.12	ENST00000394170.6	4344	7	298	0	-6	0	3prime_fragment	FALSE	canonical	3	42	junction_3	29.2068485119501	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTCTGAATCCCTGTC	99504574	False	NA	11	True	AATAAA	-16	NA	99505247	99533822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_99506459_99512452_99512592_99519826_99519910_99520168_99520305_99525812_99526419_99531107
transcript_181522.known	chr7	+	1616	5	FSM	ENSG00000198556.14	ENST00000331410.10	1616	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	14.3614066163451	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATCTTTGTGTAGCCAAT	99471515	True	NA	20	True	AATAAA	-26	NA	99472889	99487605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99473057_99476402_99476481_99479660_99479788_99484029_99484144_99486475
transcript_181528.known	chr7	+	5626	5	FSM	ENSG00000196652.12	ENST00000454175.1	5626	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	38.0944549770698	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTTTGGAGAGATGGTA	99503781	True	NA	NA	False	NA	NA	NA	99505253	99534700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99506459_99512452_99512592_99519826_99519910_99525812_99526419_99531107
transcript_181530.known	chr7	+	2994	4	FSM	ENSG00000198556.14	ENST00000483089.5	2994	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	15.1730755689881	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGCCAATCTCTGTTT	99471515	True	NA	6	True	AATAAA	-21	NA	99472889	99482326	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99473057_99476402_99476481_99478273_99478357_99479660
transcript_181536.nnic	chr7	+	3528	4	NIC	ENSG00000196652.12	novel	3111	7	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	69	junction_2	20.2155056000751	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTCTGTTTTGGTACCT	99504574	False	NA	9	True	AGTAAA	-15	NA	99505247	99532679	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_99506459_99512452_99512592_99525812_99526419_99531107
transcript_181537.nnic	chr7	+	4306	4	NIC	ENSG00000196652.12	novel	5626	5	NA	NA	-6	-365	combination_of_known_splicesites	FALSE	canonical	3	69	junction_2	20.2155056000751	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTTGTACACTGTGGT	99504574	False	NA	25	True	AATAAA	-25	NA	99505247	99533457	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_99506459_99512452_99512592_99525812_99526419_99531107
transcript_181539.known	chr7	+	1884	3	FSM	ENSG00000198556.14	ENST00000488485.5	1884	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	4.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTTTGCATGAATTTTT	99471517	True	NA	2	True	AATAGA	-12	NA	99472891	99481301	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99473057_99476402_99476481_99479660
transcript_181546.known	chr7	-	2163	3	FSM	ENSG00000160908.15	ENST00000337673.7	2163	3	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	11	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTGACTTGGCCTGTT	-99497587	True	NA	-8	True	AATAAA	-22	NA	99500281	99493239	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_99494632_99498715_99498843_99499637
transcript_181550.known	chr7	-	2017	2	FSM	ENSG00000160908.15	ENST00000426306.2	2017	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATGTGACTTGGCCTG	-99497570	True	NA	-10	True	AATAAA	-20	NA	99500264	99493241	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_99494632_99499637
transcript_181552.known	chr7	-	325	2	FSM	ENSG00000160908.15	ENST00000464401.1	325	2	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGCCTCTGTACTGCTAG	-99497010	False	53	NA	False	NA	NA	NA	99499704	99498584	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_99498843_99499637
transcript_181553.known	chr7	+	510	4	FSM	ENSG00000198556.14	ENST00000379724.3	510	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	11.6714276000077	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGATTGTGCCAATCTCT	99471537	True	NA	2	True	AATAAA	-17	NA	99472911	99482322	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99473057_99476402_99476481_99479660_99479788_99482162
transcript_181558.known	chr7	+	1601	5	FSM	ENSG00000197343.11	ENST00000320583.9	1601	5	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_3	33.618261406563	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTACTTTTTGGAGTA	99558388	False	NA	13	True	NA	NA	NA	99558405	99564705	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99558788_99560532_99560696_99561887_99561974_99562367_99562495_99563862
transcript_181561.known	chr7	+	655	5	FSM	ENSG00000197343.11	ENST00000412636.5	655	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	33.9659756226728	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGAGTAGGAAGACTCAA	99558577	False	NA	NA	False	NA	NA	NA	99558594	99572318	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99558788_99560532_99560696_99571259_99571380_99571687_99571793_99572244
transcript_181563.known	chr7	+	1979	4	FSM	ENSG00000197343.11	ENST00000467680.5	1979	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	35.5902608401044	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTACTTTTTGGAGTA	99558404	False	NA	13	True	NA	NA	NA	99558421	99564705	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99558788_99560532_99560696_99561887_99562495_99563862
transcript_181565.known	chr7	+	1815	4	FSM	ENSG00000197343.11	ENST00000493277.5	1815	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	32.5200792673627	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTCACACCAGAGAGAAAC	99554929	True	NA	NA	False	NA	NA	NA	99558717	99573721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99558788_99560532_99560696_99571687_99571793_99572244
transcript_181568.known	chr7	+	545	3	FSM	ENSG00000197343.11	ENST00000452314.5	545	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	35.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCCCTGCTCGGAAACTCC	99558549	False	NA	NA	False	NA	NA	NA	99558566	99564023	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99558788_99560532_99560696_99563862
transcript_181569.known	chr7	+	4518	3	FSM	ENSG00000197343.11	ENST00000252713.9	4518	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	30	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTTTCAAACAAAATCTG	99554853	True	NA	15	True	AATAAA	-23	NA	99558641	99576453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99558788_99560532_99560696_99572244
transcript_181572.known	chr7	+	1198	3	FSM	ENSG00000197343.11	ENST00000440391.5	1198	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	6.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTACTTTTTGGAGTA	99555037	False	NA	13	True	NA	NA	NA	99558825	99564705	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99559018_99560532_99560696_99563862
transcript_181573.known	chr7	-	2468	2	FSM	ENSG00000221909.3	ENST00000449309.2	2468	2	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTTTTCTACATAGTA	-99550199	True	NA	-14	True	AATAAA	-20	NA	99552114	99546299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_99548507_99551853
transcript_181577.known	chr7	+	2823	8	FSM	ENSG00000197037.11	ENST00000394150.5	2823	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	25.4606539185305	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTAGTATTAATGCCCT	99616509	True	NA	NA	False	ATTAAA	-17	NA	99616947	99630904	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99616990_99618524_99618652_99619047_99619133_99619560_99619998_99621372_99621575_99622548_99622641_99624056_99624181_99629190
transcript_181581.known	chr7	+	4352	8	FSM	ENSG00000197037.11	ENST00000394152.7	4352	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	12.9220583436516	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATCTCTGTCCACTCCT	99616507	True	NA	NA	False	TATAAA	-17	NA	99616945	99632408	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99617017_99618524_99618652_99619047_99619133_99619560_99619994_99621372_99621575_99622548_99622641_99624056_99624181_99629190
transcript_181585.nnic	chr7	+	3289	8	NNC	ENSG00000197037.11	novel	4352	8	NA	NA	-310	38531	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_7	20.2686044544417	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTGAAGTTTAGCTAGAT	99616573	True	NA	2	True	AATAAA	-14	NA	99616635	99670939	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_99617017_99618524_99618652_99619047_99619133_99619560_99619994_99621372_99621575_99622548_99622641_99624056_99624181_99669094
transcript_181595.known	chr7	+	558	4	FSM	ENSG00000197037.11	ENST00000493443.5	558	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	28.9942523039768	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCGTCAGGCACCAGCG	99616514	True	NA	NA	False	NA	NA	NA	99616952	99629468	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99617017_99622548_99622641_99624056_99624181_99629190
transcript_181597.known	chr7	+	4079	5	FSM	ENSG00000197037.11	ENST00000334715.7	4079	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	14.7394029729837	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCATCTCTGTCCACTCC	99619111	False	NA	NA	False	TATAAA	-16	NA	99619549	99632407	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_99619994_99621372_99621575_99622548_99622641_99624056_99624181_99629190
transcript_181598.known	chr7	-	3314	6	FSM	ENSG00000146833.16	ENST00000349062.7	3314	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	7.47261667690776	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGAATGATGTCTTTGG	-99918721	True	NA	-5	True	AATATA	-19	NA	99919530	99890402	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_99892747_99903217_99903316_99903575_99903599_99908581_99908813_99909564_99909661_99919008
transcript_1816.known	chr1	-	2174	12	FSM	ENSG00000116198.14	ENST00000494653.5	2174	12	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_5	12.265654527653	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGGGTTTTTCCAATGT	-3853956	True	NA	NA	False	CATAAA	-17	NA	3857198	3833670	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3834036_3834924_3835093_3836494_3836693_3837291_3837520_3838963_3839120_3839607_3839777_3844906_3844984_3845288_3845352_3847474_3847614_3848607_3848782_3852294_3852422_3856888
transcript_181601.known	chr7	-	1942	6	FSM	ENSG00000146833.16	ENST00000354241.5	1942	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	16.9186287860453	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATGAAACATACACA	-99918684	True	NA	NA	False	AAGAAA	-38	NA	99919493	99901165	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_99902175_99903217_99903316_99903575_99903599_99908581_99908813_99909564_99909661_99919008
transcript_181609.known	chr7	-	1119	2	FSM	ENSG00000176402.6	ENST00000312891.3	1119	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTGGTCATTGGAC	-99929523	False	97	0	True	AATAAA	-20	NA	99929620	99923265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_99923604_99928839
transcript_181615.nnic	chr7	+	4731	7	NNC	ENSG00000106261.17	novel	9403	6	NA	NA	-2	2470	intron_retention	FALSE	canonical	2	4	junction_5	23.6249632568791	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAAAAGTGAGGTGTGGAA	100012282	True	NA	NA	False	AAAAAG	-12	NA	100015569	100036741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_100015727_100023418_100023933_100024153_100024308_100029860_100029953_100030248_100030376_100030850_100031101_100033304
transcript_181617.known	chr7	+	9403	6	FSM	ENSG00000106261.17	ENST00000324306.11	9403	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	9.19565114605812	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTTGTGCTGGTTTGTTT	100012308	True	NA	34	True	AATAAA	-20	NA	100015595	100041689	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100015727_100023418_100023933_100024153_100024308_100029860_100029953_100030248_100030376_100033304
transcript_181620.nnic	chr7	+	5206	6	NNC	ENSG00000106261.17	novel	9403	6	NA	NA	-2	2470	intron_retention	FALSE	canonical	3	8	junction_5	19.7382876663605	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAAAAGTGAGGTGTGGAA	100012282	True	NA	NA	False	AAAAAG	-12	NA	100015569	100036741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_100015727_100023418_100023933_100024153_100024308_100029860_100029953_100030248_100031101_100033304
transcript_181622.known	chr7	+	1449	3	FSM	ENSG00000106261.17	ENST00000482979.5	1449	3	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	3.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTTTTTTGTTTTTAG	100012311	True	NA	NA	False	ATTAAA	-30	NA	100015598	100024960	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100015727_100023418_100023933_100024153
transcript_181632.known	chr7	-	1441	6	FSM	ENSG00000166526.18	ENST00000413658.6	1441	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	65.214722264225	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATATAACGTCTCTCTC	-100078310	True	NA	-4	True	ACTAAA	-19	NA	100081727	100064032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100064913_100075134_100075262_100075541_100075631_100077302_100077434_100079535_100079657_100081634
transcript_181636.nic	chr7	-	2906	6	NIC	ENSG00000166526.18	novel	2797	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	68.2219905895452	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGAGATTGAGTGTGGTT	-100081746	False	NA	-8	True	ATTAAA	-15	NA	100081764	100069978	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_100072213_100075134_100075262_100075541_100075631_100077228_100077434_100079535_100079657_100081634
transcript_181637.known	chr7	-	2797	6	FSM	ENSG00000166526.18	ENST00000299667.9	2797	6	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_4	20.0957706993288	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGAGTGTGGTTTTGTGC	-100078306	True	NA	-2	True	ATTAAA	-21	NA	100081723	100069972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100072213_100075134_100075262_100075541_100075631_100077302_100077434_100079535_100079657_100081634
transcript_181639.known	chr7	-	999	6	FSM	ENSG00000166526.18	ENST00000428683.5	999	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_5	67.6951992389416	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCTTATCTCACATCAGA	-100082530	False	NA	NA	False	AATATA	-32	NA	100082548	100071929	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100072213_100075134_100075262_100075541_100075631_100077302_100077434_100079535_100079657_100082300
transcript_181642.nic	chr7	-	2708	6	NIC	ENSG00000166526.18	novel	2797	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	68.2219905895452	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAAAACA	-100081746	False	NA	5	True	NA	NA	NA	100081764	100070176	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_100072213_100075134_100075262_100075541_100075631_100077228_100077434_100079535_100079657_100081634
transcript_181647.nic	chr7	+	2146	5	NIC	ENSG00000166529.16	novel	2009	4	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	37	junction_1	42.8682574873297	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGCCTCAGGACTATTAT	100048027	True	NA	4	True	AATAAA	-15	NA	100049766	100065037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_100049842_100051477_100051611_100056910_100057406_100057697_100057891_100063787
transcript_181649.known	chr7	+	1904	5	FSM	ENSG00000166529.16	ENST00000456748.6	1904	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	51.2853536596951	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCCTCAGGACTATTATT	100048034	True	NA	5	True	AATAAA	-16	NA	100049773	100065038	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100049842_100056910_100057406_100057697_100057891_100063787_100063980_100064082
transcript_181655.known	chr7	-	735	5	FSM	ENSG00000166526.18	ENST00000449785.5	735	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	65.479004268544	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCTTATCTCACATCAGA	-100078322	True	NA	NA	False	AATATA	-32	NA	100081739	100071929	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100072213_100075134_100075262_100075541_100075631_100077302_100077434_100081634
transcript_181657.known	chr7	-	574	5	FSM	ENSG00000166526.18	ENST00000441298.5	574	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	80.1155415634195	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAAAAGGCCGCTGGGGA	-100078321	True	NA	NA	False	TTTAAA	-24	NA	100081738	100072079	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100072213_100075134_100075262_100075541_100075631_100079535_100079657_100081634
transcript_181666.nic	chr7	-	2914	5	NIC	ENSG00000166526.18	novel	2797	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	141	junction_3	21.511624764299	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAAAACA	-100081746	False	NA	5	True	NA	NA	NA	100081764	100070176	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_100072213_100075134_100075631_100077302_100077434_100079535_100079657_100081634
transcript_181669.known	chr7	+	2009	4	FSM	ENSG00000166529.16	ENST00000292450.9	2009	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	30.3790863735052	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTCAGGACTATTATTAT	100048034	True	NA	7	True	AATAAA	-18	NA	100049773	100065040	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100049842_100056910_100057406_100057697_100057891_100063787
transcript_181672.known	chr7	-	2545	4	FSM	ENSG00000166526.18	ENST00000412947.6	2545	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	82.624989494032	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATAGTTTTTCAGAAGAG	-100078325	True	NA	-21	True	ATTAAA	-2	NA	100081742	100069991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100072213_100075134_100075262_100075541_100075631_100081634
transcript_181680.known	chr7	+	1107	10	FSM	ENSG00000168090.10	ENST00000418625.5	1107	10	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	805.352434161515	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGCTGGTGGCTCTGTC	100059278	True	NA	9	True	AATAAA	-21	NA	100088980	100091905	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100089067_100089292_100089416_100089614_100089747_100090398_100090488_100090591_100090655_100090901_100090950_100091037_100091153_100091237_100091331_100091419_100091521_100091648
transcript_181696.known	chr7	+	835	3	FSM	ENSG00000168090.10	ENST00000472107.5	835	3	0	0	0	0	multi-exon	FALSE	canonical	3	2244	junction_1	272	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGGATGCTGAGGCAGGAG	100059279	True	NA	NA	False	AATACA	-45	NA	100088981	100090238	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100089067_100089289_100089416_100089614
transcript_181722.known	chr7	+	3591	15	FSM	ENSG00000221838.10	ENST00000359593.9	3591	15	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	15.3855219513114	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGGTGTGGTGGTTCA	100100391	True	NA	NA	False	AAAAAG	-3	NA	100101642	100109039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100101773_100101879_100101969_100102674_100102782_100102863_100102961_100103408_100103520_100103611_100103693_100104091_100104155_100104873_100104941_100105044_100105099_100105239_100105347_100105444_100105540_100105958_100106004_100106240_100106292_100106402_100106515_100106657
transcript_181724.known	chr7	+	1836	15	FSM	ENSG00000221838.10	ENST00000429084.5	1836	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	30.8462282283972	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGTGTACGTGCACGT	100100305	True	NA	45	True	NA	NA	NA	100101556	100107177	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100101773_100101879_100101990_100102674_100102782_100102863_100102961_100103408_100103520_100103611_100103693_100104091_100104155_100104873_100104941_100105044_100105099_100105239_100105347_100105444_100105540_100105958_100106004_100106240_100106292_100106402_100106515_100106657
transcript_181739.known	chr7	-	2467	15	FSM	ENSG00000166508.18	ENST00000303887.10	2467	15	0	0	0	0	multi-exon	FALSE	canonical	3	1069	junction_12	354.740038476007	4784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCTGTTCGTTTTTATG	-100079116	True	NA	-1	True	ATTAAA	-23	NA	100101397	100092727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100093134_100093291_100093402_100094172_100094342_100095386_100095471_100095773_100096168_100097300_100097385_100097613_100097746_100097833_100097949_100098140_100098291_100098577_100098716_100099022_100099204_100099278_100099404_100099588_100099754_100100013_100100094_100101263
transcript_181754.known	chr7	-	2727	15	FSM	ENSG00000106290.16	ENST00000344095.8	2727	15	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_14	245.643428321523	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTCTGATCCACTGCAGT	-100105897	True	NA	-12	True	AATAAA	-13	NA	100119346	100107078	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100107624_100107925_100108124_100108366_100108541_100109947_100110074_100110199_100110275_100111138_100111322_100111727_100111830_100111921_100112000_100112107_100112254_100112797_100112918_100113348_100113406_100113615_100113770_100113867_100113955_100114053_100114269_100118879
transcript_181755.known	chr7	-	2424	15	FSM	ENSG00000106290.16	ENST00000453269.7	2424	15	0	0	0	0	multi-exon	FALSE	canonical	3	738	junction_14	110.253256696775	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGCAGTCCTTCCTGC	-100105909	True	NA	-3	True	AATAAA	-22	NA	100119358	100107069	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100107624_100107925_100108124_100108366_100108541_100109947_100110074_100110199_100110275_100111138_100111322_100111727_100111830_100111921_100112000_100112107_100112254_100112797_100112918_100113348_100113406_100113615_100113770_100113867_100113955_100114053_100114269_100119203
transcript_181757.known	chr7	-	2297	15	FSM	ENSG00000106290.16	ENST00000452041.5	2297	15	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_14	269.388044217532	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTGATCCACTGCAGTC	-100105915	True	NA	-11	True	AATAAA	-14	NA	100119364	100107077	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100107624_100107925_100108124_100108366_100108541_100109947_100110074_100110199_100110275_100111138_100111322_100111727_100111830_100111921_100112000_100112107_100112254_100112797_100112918_100113348_100113406_100113615_100113770_100113867_100113955_100114053_100114269_100119328
transcript_181758.known	chr7	-	2318	15	FSM	ENSG00000106290.16	ENST00000437822.6	2318	15	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_14	282.070813586856	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGGAAGGAAGTTGTAGAT	-100119601	False	240	-41	True	NA	NA	NA	100119841	100107167	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100107624_100107925_100108124_100108366_100108541_100109947_100110074_100110199_100110275_100111138_100111322_100111727_100111830_100111921_100112000_100112107_100112254_100112797_100112918_100113348_100113406_100113615_100113770_100113867_100113955_100114053_100114269_100119694
transcript_181764.known	chr7	-	2685	15	FSM	ENSG00000106290.16	ENST00000421980.5	2685	15	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_11	353.696031435272	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGCAGTCCTTCCTGC	-100105910	True	NA	-3	True	AATAAA	-22	NA	100119359	100107069	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100107624_100107925_100108124_100108366_100108541_100109947_100110074_100110199_100110275_100111138_100111322_100111727_100111830_100111921_100112000_100112107_100112254_100112797_100112918_100113348_100113406_100113679_100113770_100113867_100113955_100114053_100114269_100118879
transcript_181778.known	chr7	+	1681	14	FSM	ENSG00000221838.10	ENST00000445208.5	1681	14	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	31.099953385684	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGCAATCTACAACTTCC	100100305	True	NA	8	True	AAAAAG	-14	NA	100101556	100107140	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100101773_100101879_100101969_100102674_100102782_100103408_100103520_100103611_100103693_100104091_100104155_100104873_100104941_100105044_100105099_100105239_100105347_100105444_100105540_100105958_100106004_100106240_100106292_100106402_100106515_100106657
transcript_181780.known	chr7	+	1814	14	FSM	ENSG00000221838.10	ENST00000422582.5	1814	14	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	26.3542098856753	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACAACTTCCTTCCGCTT	100101957	True	NA	16	True	AAAAAG	-22	NA	100102060	100107148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100102394_100102674_100102782_100102863_100102961_100103408_100103520_100103611_100103693_100104091_100104155_100104873_100104941_100105044_100105099_100105239_100105347_100105444_100105540_100105958_100106004_100106240_100106292_100106402_100106515_100106657
transcript_181789.nic	chr7	-	3298	14	NIC	ENSG00000166508.18	novel	2467	15	NA	NA	-156	0	intron_retention	FALSE	canonical	3	1202	junction_12	313.594450349398	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCTAGCCTGGGCCTGA	-100102067	False	NA	-9	True	AATAAA	-18	NA	100102096	100092780	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_100093134_100093291_100093402_100094172_100094342_100095386_100095471_100095773_100096168_100097300_100097385_100097613_100097746_100097833_100097949_100098140_100098291_100098577_100098716_100099022_100099204_100099278_100099754_100100013_100100094_100101263
transcript_181791.known	chr7	-	2900	14	FSM	ENSG00000166508.18	ENST00000485286.5	2900	14	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_13	573.047660584855	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCTAGCCTGGGCCTGA	-100100728	False	22281	-9	True	AATAAA	-18	NA	100100757	100092780	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100093134_100093291_100093402_100094172_100094342_100095386_100095471_100095773_100096168_100097300_100097385_100097613_100097746_100097833_100097949_100098140_100098291_100098577_100098716_100099022_100099404_100099588_100099754_100100013_100100094_100100212
transcript_181792.known	chr7	-	3084	14	FSM	ENSG00000166508.18	ENST00000621318.4	3084	14	0	0	0	0	multi-exon	FALSE	canonical	3	1069	junction_11	362.496357867849	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTCCTGTTCGTTTTTAT	-100101911	False	NA	-2	True	ATTAAA	-22	NA	100101940	100092728	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100093134_100093291_100093402_100094172_100094342_100095386_100095471_100095773_100096168_100097300_100097385_100097613_100097746_100097833_100097949_100098140_100098291_100098577_100098716_100099022_100099404_100099588_100099754_100100013_100100094_100101263
transcript_1818.nic	chr1	-	2279	9	ISM	ENSG00000116198.14	ENST00000674879.1	7030	21	0	24383	0	1347	5prime_fragment	FALSE	canonical	3	66	junction_2	13.7289611770155	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGTGGCAGAGGGGAGGC	-3853969	True	NA	NA	False	NA	NA	NA	3857211	3836468	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_3837520_3838963_3839120_3839607_3839777_3844906_3844984_3845288_3845352_3847474_3847614_3848607_3848782_3852294_3852422_3856888
transcript_181889.known	chr7	+	1478	6	FSM	ENSG00000166997.8	ENST00000262932.5	1478	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	10.5451410611713	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCTGGGCCCAAAGTTTC	100118130	True	NA	23	True	ATTAAA	-23	NA	100119633	100125508	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100119863_100122258_100122386_100122480_100122578_100122783_100122907_100124513_100124632_100124724
transcript_181901.known	chr7	+	718	2	FSM	ENSG00000214309.5	ENST00000421390.1	718	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGCACTCGGATCACATCG	100126723	False	NA	NA	False	NA	NA	NA	100126784	100127736	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100127134_100127367
transcript_181902.known	chr7	+	1226	2	FSM	ENSG00000214309.5	ENST00000398075.4	1226	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGTGCCCTAGTGTAAA	100126955	True	NA	9	True	AATAAA	-21	NA	100126966	100128495	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100127065_100127367
transcript_181903.known	chr7	+	1572	16	FSM	ENSG00000221838.10	ENST00000421755.5	1572	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	30.7683820395765	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTGACAGGGACCTAAGT	100100412	True	NA	NA	False	AATAAA	-25	NA	100101663	100110319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100101773_100101879_100101969_100102674_100102782_100102863_100102961_100103408_100103520_100103611_100103693_100104091_100104155_100104873_100104941_100105044_100105099_100105239_100105347_100105444_100105540_100105958_100106004_100106240_100106292_100106402_100106515_100106657_100106913_100110190
transcript_181904.known	chr7	-	2555	11	FSM	ENSG00000146826.17	ENST00000316937.8	2555	11	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_10	11.1427106217473	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGATGACTAGTTTGTGT	-100157084	True	NA	-8	True	ATTAAA	-18	NA	100158723	100154422	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100155165_100155261_100155456_100155670_100155826_100156385_100156550_100156633_100156717_100156844_100156993_100157093_100157215_100157372_100157460_100157632_100157763_100157842_100157939_100158088
transcript_181910.nic	chr7	+	666	5	NIC	ENSG00000188186.11	novel	720	4	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_2	858.960818372992	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	100139506	True	NA	21	True	AATAAA	-21	NA	100148965	100154203	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_100149054_100149498_100149580_100152715_100152758_100153399_100153518_100153866
transcript_181913.nnic	chr7	+	604	4	NNC	ENSG00000188186.11	novel	594	4	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_1	919.914609563784	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	100139506	True	NA	21	True	AATAAA	-21	NA	100148965	100154203	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_100149034_100149498_100149580_100153399_100153518_100153866
transcript_181914.known	chr7	+	613	4	FSM	ENSG00000188186.11	ENST00000488241.5	613	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	815.924424604795	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	100139534	True	NA	21	True	AATAAA	-21	NA	100148993	100154203	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100149054_100149498_100149580_100153399_100153518_100153849
transcript_181916.known	chr7	+	519	3	FSM	ENSG00000188186.11	ENST00000474141.5	519	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	1045	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	100139452	True	NA	21	True	AATAAA	-21	NA	100148911	100154203	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100148976_100153399_100153518_100153866
transcript_181918.known	chr7	+	564	4	FSM	ENSG00000188186.11	ENST00000474831.5	564	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	834.523949459943	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	100139474	True	NA	21	True	AATAAA	-21	NA	100148933	100154203	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100148976_100149498_100149566_100153399_100153518_100153866
transcript_181921.nic	chr7	-	2392	4	NIC	ENSG00000197093.11	novel	2405	4	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	19.3620476419435	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGATTTATGGAGGGTG	-100164198	False	NA	-6	True	AATAAA	-15	NA	100168166	100159243	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_100160960_100166501_100166806_100166970_100167284_100168107
transcript_181922.known	chr7	-	2405	4	FSM	ENSG00000197093.11	ENST00000360039.9	2405	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	12.328828005938	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGATTTATGGAGGGTG	-100164649	False	3968	-6	True	AATAAA	-15	NA	100168617	100159243	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100160960_100166501_100166806_100166970_100167284_100168545
transcript_181923.nnic	chr7	-	2491	4	NNC	ENSG00000197093.11	novel	2405	4	NA	NA	-366	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	18.4932420089069	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGATTTATGGAGGGTG	-100165015	False	NA	-6	True	AATAAA	-15	NA	100168983	100159243	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_100160960_100166501_100166806_100166970_100167284_100168825
transcript_181926.known	chr7	-	1695	3	FSM	ENSG00000197093.11	ENST00000423751.2	1695	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	9	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTTCAAGCGATTCTCCT	-100164645	False	3968	NA	False	NA	NA	NA	100168613	100159645	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100160960_100166970_100167284_100168545
transcript_18193.known	chr1	+	1432	5	FSM	ENSG00000198892.7	ENST00000362011.7	1432	5	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_4	7.21110255092798	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGCACTGCTAACTGTAC	201887876	True	NA	NA	False	NA	NA	NA	201888897	201892587	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_201889068_201889444_201889617_201890453_201890588_201891400_201891569_201891799
transcript_181930.known	chr7	-	2546	10	FSM	ENSG00000213420.8	ENST00000292377.4	2546	10	0	0	0	0	multi-exon	TRUE	canonical	3	97	junction_7	16.4991582276861	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCATGTGTGGCTTCTGTG	-100173413	True	NA	-5	True	AATAAA	-16	NA	100177381	100169605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100170484_100171260_100171437_100171538_100171679_100171778_100171926_100172086_100172218_100173834_100173998_100174684_100174766_100175571_100175895_100176206_100176366_100177033
transcript_181934.known	chr7	+	4450	34	FSM	ENSG00000066923.18	ENST00000426455.5	4450	34	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_1	4.33513418820595	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGTTCCCAAGGTGTGGC	NA	False	NA	3	True	AATAAA	-14	NA	100177562	100214380	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100177906_100180492_100180673_100182089_100182193_100182722_100182840_100186199_100186297_100188452_100188530_100188811_100189017_100189444_100189597_100195308_100195383_100197155_100197280_100197777_100197877_100198086_100198167_100198474_100198583_100198842_100198958_100199261_100199368_100199540_100199645_100200235_100200329_100200452_100200543_100200768_100200970_100201089_100201161_100201263_100201352_100201785_100201867_100201948_100202042_100202171_100202341_100202453_100202591_100204020_100204123_100204626_100204776_100205004_100205134_100205226_100205385_100211010_100211186_100211437_100211540_100211794_100211877_100213734_100213807_100214006
transcript_181946.known	chr7	-	3526	8	FSM	ENSG00000239521.10	ENST00000328453.9	3526	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	23.080161991438	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGCTGATTTTTCTGGA	-100270954	True	NA	NA	False	ATTAAA	-27	NA	100272206	100200652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100202604_100211393_100211995_100213046_100213134_100222596_100222721_100223569_100223699_100223881_100224076_100233603_100233675_100271837
transcript_181949.nic	chr7	-	4087	7	ISM	ENSG00000239521.10	ENST00000328453.9	3526	8	-57	8286	-45	2645	5prime_fragment	FALSE	canonical	1	1	junction_1	21.4372469210847	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTGCCTAAGTGTATCT	-100271011	False	NA	-7	True	AATAAA	-14	NA	100272263	100208938	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_100211995_100213046_100213134_100222596_100222721_100223569_100223699_100223881_100224076_100233603_100233675_100271837
transcript_18195.known	chr1	-	3927	3	FSM	ENSG00000163431.13	ENST00000367288.5	3927	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	3.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGTTTTGTTTGTTGGT	-201946393	True	NA	NA	False	AATAAA	-13	NA	201946548	201896455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_201898399_201899236_201900752_201946079
transcript_181950.known	chr7	-	2840	6	FSM	ENSG00000239521.10	ENST00000543273.5	2840	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	22.6927301134086	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGCTGATTTTTCTGGA	-100270956	True	NA	NA	False	ATTAAA	-27	NA	100272208	100200652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100202604_100222596_100222721_100223569_100223699_100223881_100224076_100233603_100233675_100271837
transcript_181951.known	chr7	-	2007	6	FSM	ENSG00000239521.10	ENST00000414739.3	2007	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	15.6894869259642	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATAACCTGTCCTCCTTT	-100270962	True	NA	-5	True	AATAAA	-29	NA	100272214	100212021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100213134_100222596_100222721_100223569_100223699_100223881_100224076_100233603_100233675_100271837
transcript_181953.known	chr7	-	1030	5	FSM	ENSG00000239521.10	ENST00000454084.5	1030	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	28.2001773044071	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGTGGTCCATGAGGAAGC	-100270935	True	NA	NA	False	NA	NA	NA	100272187	100202312	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100202604_100222596_100222721_100223881_100224076_100233603_100233675_100271837
transcript_181954.known	chr7	-	2726	5	FSM	ENSG00000239521.10	ENST00000649671.1	2726	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	23.6696007570892	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGCTGATTTTTCTGGA	-100270966	True	NA	NA	False	ATTAAA	-27	NA	100272218	100200652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100202604_100223569_100223699_100223881_100224076_100233603_100233675_100271837
transcript_181955.known	chr7	-	664	5	FSM	ENSG00000239521.10	ENST00000647868.1	664	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	16.015617378047	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGGCTGCCTTGGGCATG	-100270731	False	1252	NA	False	NA	NA	NA	100271983	100222596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100222721_100223569_100223699_100223881_100224076_100233603_100233675_100271837
transcript_181957.nic	chr7	-	1086	4	FSM	ENSG00000239521.10	ENST00000689058.1	856	4	-239	9	-45	-9	multi-exon	FALSE	canonical	3	53	junction_1	4.24264068711928	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTGGGTGTGGTGGTGC	-100271011	False	NA	-9	True	AATACA	-4	NA	100272263	100223303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100223699_100223881_100224076_100233603_100233675_100271837
transcript_181993.known	chr7	+	3634	18	FSM	ENSG00000272752.6	ENST00000310771.8	3634	18	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_8	48.5129027177699	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCTGTGCATCTCCCAC	100331432	True	NA	15	True	AATAAA	-22	NA	100336113	100367831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100336338_100338178_100338265_100338772_100338890_100345864_100345969_100349798_100349888_100351251_100351411_100352162_100352479_100352563_100352668_100352760_100352915_100352996_100353124_100353209_100353271_100353372_100354013_100355142_100355241_100356749_100356884_100358219_100358367_100358689_100359080_100359336_100359538_100367348
transcript_18200.known	chr1	+	1650	6	FSM	ENSG00000134375.11	ENST00000367287.5	1650	6	0	0	0	0	multi-exon	FALSE	canonical	3	794	junction_1	100.041991183702	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAAGTGTATAATTCAG	201952190	True	NA	NA	False	CATAAA	-18	NA	201955502	201970664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_201955553_201957280_201957381_201957510_201957575_201963615_201963745_201965432_201965544_201969468
transcript_1821.known	chr1	-	2376	8	FSM	ENSG00000116198.14	ENST00000675520.1	2376	8	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	14.449066066846	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACATGCTCCATGCACAAA	-3853969	True	NA	NA	False	NA	NA	NA	3857211	3837815	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3839120_3839607_3839777_3844906_3844984_3845288_3845352_3847474_3847614_3848607_3848782_3852294_3852422_3856888
transcript_1822.known	chr1	+	2842	7	FSM	ENSG00000169598.17	ENST00000378206.5	2842	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	12.1792172709634	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTCAAGAAAGTTTGCAC	3856895	False	NA	NA	False	AATAAA	-18	NA	3857516	3885429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_3857718_3858717_3858845_3865761_3866001_3867973_3868054_3869604_3869776_3872471_3872573_3883506
transcript_182221.known	chr7	-	1244	7	FSM	ENSG00000078319.11	ENST00000675162.2	1822	7	0	578	0	0	multi-exon	FALSE	canonical	3	66	junction_1	111.979784882014	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATCTCCCCTGGGTCCGGT	-100336245	True	NA	-6	True	AATAAA	-18	NA	100336307	100320913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100321085_100325690_100325780_100328835_100329020_100330181_100330285_100330462_100330550_100332441_100332582_100335837
transcript_182225.known	chr7	-	788	6	FSM	ENSG00000078319.11	ENST00000675610.2	837	6	45	4	-1	0	multi-exon	FALSE	canonical	3	11	junction_1	129.117001204334	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCCCCTGGGTCCGGTG	-100332482	True	NA	-5	True	AATAAA	-19	NA	100335939	100320912	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100321085_100328835_100329020_100330181_100330285_100330462_100330550_100332441_100332582_100335837
transcript_182227.known	chr7	-	747	6	FSM	ENSG00000078319.11	ENST00000674972.2	779	6	29	3	0	0	multi-exon	FALSE	canonical	3	103	junction_1	103.9838448991	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCAGTTTCCAGTAGTT	-100332493	True	NA	NA	False	ATTAAA	-18	NA	100335950	100325659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100325780_100328835_100329020_100330181_100330285_100330462_100330550_100332441_100332582_100335837
transcript_182229.known	chr7	-	2236	5	FSM	ENSG00000078319.11	ENST00000676200.2	2335	5	99	0	-1	0	multi-exon	FALSE	canonical	0	0	junction_1	138.744369255116	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAAAAATACGCCAGACG	-100332423	True	NA	NA	False	ATTAAA	-3	NA	100335880	100319221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100321085_100330181_100330285_100330462_100330550_100332441_100332582_100335837
transcript_182230.known	chr7	-	537	5	FSM	ENSG00000078319.11	ENST00000675486.2	899	5	105	257	4	-149	multi-exon	FALSE	canonical	3	112	junction_1	93.9893611000735	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAGTAAATTAATCCTGG	-100332403	True	NA	NA	False	CATAAA	-25	NA	100335860	100328835	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100329020_100330181_100330285_100330462_100330550_100332441_100332582_100335837
transcript_182239.known	chr7	-	602	4	FSM	ENSG00000078319.11	ENST00000674524.2	772	4	67	103	26	-98	multi-exon	FALSE	canonical	0	0	junction_3	160.15825506875	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATATCTCAGCTTCCAGC	-100332381	True	NA	NA	False	NA	NA	NA	100335838	100330091	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100330285_100330462_100330550_100332441_100332582_100335656
transcript_182240.known	chr7	-	604	4	FSM	ENSG00000078319.11	ENST00000675836.2	757	4	63	90	0	2	multi-exon	FALSE	canonical	3	234	junction_3	50.622788017519	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTGTTAAAAAAATTGGT	-100332459	True	NA	NA	False	AATAAA	-21	NA	100335916	100329986	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100330285_100330462_100330550_100332441_100332582_100335837
transcript_182241.known	chr7	+	683	4	FSM	ENSG00000242294.6	ENST00000422479.5	683	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	45.7019328548221	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTTCCCAAGGTGTGGCT	100331443	True	NA	NA	False	AATAAA	-15	NA	100336124	100341328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100336221_100338178_100338265_100338772_100338890_100340944
transcript_182242.nnic	chr7	+	3487	5	NNC	ENSG00000146834.14	novel	2822	4	NA	NA	120	0	intron_retention	TRUE	non_canonical	0	0	junction_1	78.062074658569	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTCTCGGTACTGTCT	100423816	False	NA	15	True	AATAAA	-27	NA	100428936	100434118	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_100430832_100431060_100431690_100432918_100433138_100433262_100433390_100433501
transcript_182245.known	chr7	+	2822	4	FSM	ENSG00000146834.14	ENST00000310512.4	2822	4	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	7.40870359029762	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTCTCGGTACTGTCT	100429748	True	NA	15	True	AATAAA	-27	NA	100429830	100434118	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100431690_100432918_100433138_100433262_100433390_100433501
transcript_182246.known	chr7	-	2364	18	FSM	ENSG00000078487.18	ENST00000684423.1	2364	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	1.455213750218	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTTGGCTGGTCTCTAA	-100423673	False	155	-18	True	AATAAA	-16	NA	100428703	100400871	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100401337_100401888_100402042_100402515_100402577_100403693_100403786_100404177_100404245_100405012_100405094_100406693_100406799_100407227_100407304_100408538_100408660_100409427_100409545_100415974_100416098_100416304_100416457_100417065_100417184_100419110_100419190_100419629_100419884_100420621_100420679_100425029_100425137_100428567
transcript_182248.known	chr7	-	963	4	FSM	ENSG00000160813.7	ENST00000292330.3	963	4	0	0	0	0	multi-exon	FALSE	canonical	3	574	junction_3	177.623196683316	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGACTCTTCTTGGAGGCC	-100431467	True	NA	-32	True	AATAAA	-18	NA	100436497	100435281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100435534_100435630_100435768_100435847_100436065_100436140
transcript_182249.known	chr7	-	942	3	FSM	ENSG00000160813.7	ENST00000491407.1	942	3	0	0	0	0	multi-exon	FALSE	canonical	3	574	junction_2	217.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAAAGATCCCTGGAGGG	-100431443	True	NA	-40	True	NA	NA	NA	100436473	100435358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100435534_100435630_100436065_100436140
transcript_182250.nic	chr7	-	838	3	NIC	ENSG00000160813.7	novel	963	4	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	117	junction_1	228.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGACTCTTCTTGGAGGC	-100431480	True	NA	-33	True	AATAAA	-17	NA	100436510	100435282	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_100435534_100435847_100436065_100436140
transcript_182251.nic	chr7	-	1153	2	NIC	ENSG00000160813.7	novel	963	4	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	574	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGACTCTTCTTGGAGGCC	-100431480	True	NA	-32	True	AATAAA	-18	NA	100436510	100435281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_100436065_100436140
transcript_182252.known	chr7	-	758	2	FSM	ENSG00000160813.7	ENST00000470295.5	758	2	0	0	0	0	multi-exon	FALSE	canonical	3	1009	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGACTCTTCTTGGAGGCC	-100431106	False	NA	-32	True	AATAAA	-18	NA	100436136	100435281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100435534_100435630
transcript_182253.known	chr7	-	965	3	FSM	ENSG00000160813.7	ENST00000487452.1	965	3	0	0	0	0	multi-exon	FALSE	canonical	3	799	junction_2	105	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGACTCTTCTTGGAGGCC	-100431393	True	NA	-32	True	AATAAA	-18	NA	100436423	100435281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100435534_100435630_100435768_100435847
transcript_182260.known	chr7	-	1469	5	FSM	ENSG00000166925.9	ENST00000393991.5	1469	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	40.904614654095	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTCTGAAGAAACTTGAAT	-100476914	True	NA	-30	True	ATTAAA	-19	NA	100479232	100466537	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100467169_100467551_100467601_100474273_100474441_100477276_100477460_100478793
transcript_182261.nnic	chr7	-	2456	5	NNC	ENSG00000166925.9	novel	2318	5	NA	NA	-226	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	50.3655388137564	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGAGGTTGACATCTCGT	-100479104	True	NA	-11	True	ATTAAA	-38	NA	100479458	100466518	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_100467169_100467551_100467601_100474273_100474441_100477276_100478202_100478793
transcript_182262.known	chr7	-	2318	5	FSM	ENSG00000166925.9	ENST00000300181.7	2318	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_4	19.6389281784928	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGAGGTTGACATCTCGT	-100476896	True	NA	-11	True	ATTAAA	-38	NA	100479214	100466518	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100467169_100467551_100467601_100474273_100474441_100477276_100478308_100478793
transcript_182268.known	chr7	-	2060	3	FSM	ENSG00000166925.9	ENST00000493217.1	2060	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	18	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAGAAAAAAAAAAT	-100476851	True	NA	NA	False	AAAAAG	-6	NA	100479169	100473787	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100474441_100477276_100478308_100478793
transcript_182269.known	chr7	+	3584	7	FSM	ENSG00000166924.9	ENST00000300179.7	3584	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.06718737290547	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCTTCTTCTATTTCAC	100483494	True	NA	8	True	ATTAAA	-18	NA	100483926	100494802	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100484002_100485227_100485380_100486820_100487183_100488151_100489667_100490516_100490730_100490985_100491096_100493645
transcript_182270.nic	chr7	+	2626	13	NIC	ENSG00000106351.13	novel	4819	12	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_6	8.42944574426786	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTGGAAAAGAACTGCATT	NA	False	NA	-28	True	NA	NA	NA	100539169	100565961	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_100539568_100548821_100548916_100550395_100550512_100553346_100553501_100554092_100554259_100555609_100555736_100556593_100556627_100562258_100562380_100562593_100562683_100562862_100562947_100563833_100563963_100564217_100564304_100564931
transcript_182272.known	chr7	+	4819	12	FSM	ENSG00000106351.13	ENST00000300176.9	4819	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	5.34743315267372	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCAAGCCTCAGGGAGTA	100538551	True	NA	NA	False	AATAAA	-18	NA	100539202	100568220	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100539568_100548821_100548916_100550395_100550512_100553346_100553501_100554092_100554259_100555609_100555736_100562258_100562380_100562593_100562683_100562862_100562947_100563833_100563963_100564217_100564304_100564931
transcript_182277.known	chr7	+	1516	9	FSM	ENSG00000106333.13	ENST00000223061.6	1516	9	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	63.1402209372124	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTCAGATCTCCATGCTT	100601011	True	NA	8	True	AATAAA	-18	NA	100602362	100608175	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100602552_100603429_100603539_100603958_100604218_100605090_100605216_100605675_100605813_100606415_100606631_100607451_100607524_100607636_100607808_100607936
transcript_182279.nnic	chr7	+	1393	9	NNC	ENSG00000106333.13	novel	960	4	NA	NA	61	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	81.1948851529454	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGGGTCAGATCTCCAT	100603093	True	NA	4	True	AATAAA	-14	NA	100603223	100608171	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_100603294_100603429_100603539_100603958_100604218_100605090_100605216_100605675_100605813_100606415_100606631_100607451_100607524_100607636_100607808_100607936
transcript_182284.nic	chr7	+	2082	8	NIC	ENSG00000106333.13	novel	1516	9	NA	NA	-110	0	intron_retention	FALSE	canonical	3	99	junction_1	65.8461410085229	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGGGTCAGATCTCCAT	NA	False	NA	4	True	AATAAA	-14	NA	100602252	100608171	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_100602552_100603429_100603539_100603958_100604218_100605090_100605813_100606415_100606631_100607451_100607524_100607636_100607808_100607936
transcript_182287.nic	chr7	+	2602	7	NIC	ENSG00000106333.13	novel	1516	9	NA	NA	-27	0	intron_retention	FALSE	canonical	3	99	junction_1	70.5730511991338	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGGGTCAGATCTCCAT	100600984	True	NA	4	True	AATAAA	-14	NA	100602335	100608171	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_100602552_100603429_100603539_100603958_100604218_100605090_100606631_100607451_100607524_100607636_100607808_100607936
transcript_182290.nic	chr7	+	1141	7	NIC	ENSG00000106333.13	novel	960	4	NA	NA	-121	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	78.0590944235342	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGGGTCAGATCTCCAT	100603217	True	NA	4	True	AATAAA	-14	NA	100604316	100608171	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_100604503_100605090_100605216_100605675_100605813_100606415_100606631_100607451_100607524_100607636_100607808_100607936
transcript_1823.known	chr1	+	2833	7	FSM	ENSG00000169598.17	ENST00000378209.8	2833	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	4.10960933531265	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTCAAGAAAGTTTGCAC	3856854	True	NA	NA	False	AATAAA	-18	NA	3857475	3885429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_3857718_3858717_3858845_3865811_3866001_3867973_3868054_3869604_3869776_3872471_3872573_3883506
transcript_182300.known	chr7	-	1111	6	FSM	ENSG00000205307.12	ENST00000622764.3	1111	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	19.1373979422491	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTCCGTGTGGCTGGGA	-100573837	True	NA	-3	True	AATAAA	-20	NA	100573900	100572227	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100572572_100572653_100572752_100572859_100573014_100573105_100573213_100573296_100573401_100573596
transcript_182301.known	chr7	-	3177	18	FSM	ENSG00000077454.17	ENST00000310300.11	3177	18	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_11	27.7759199686312	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCTGAGAGCACGTGC	-100580988	True	NA	-5	True	AATAAA	-39	NA	100586129	100574010	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100575305_100575704_100575783_100575870_100576009_100576237_100576324_100576693_100576778_100576901_100577006_100577085_100577155_100577272_100577390_100577496_100577559_100577663_100577741_100577821_100577913_100578158_100578259_100578398_100578512_100578649_100578787_100581776_100581883_100582040_100582168_100582314_100582460_100585880
transcript_182302.known	chr7	+	1053	6	FSM	ENSG00000106330.12	ENST00000223054.8	1053	6	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	97.9109799767115	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTGTACTCATTTTCCA	100612090	False	NA	-39	True	AAAACA	-6	NA	100612101	100615326	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100612242_100612729_100612997_100613193_100613270_100613476_100613707_100614866_100615032_100615151
transcript_182305.known	chr7	+	1154	5	FSM	ENSG00000106330.12	ENST00000393950.7	1154	5	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_3	30.2438010177292	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAAATGTAGGGTACTTG	100611286	True	NA	12	True	AATAAA	-21	NA	100612539	100615377	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100612997_100613193_100613270_100613476_100613707_100614866_100615032_100615151
transcript_182306.known	chr7	+	1115	5	FSM	ENSG00000106330.12	ENST00000424091.2	1115	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	159.00687878202	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTACTTGCCCCTGT	100611302	True	NA	19	True	AATAAA	-28	NA	100612555	100615384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100612997_100613193_100613270_100613506_100613707_100614866_100615032_100615151
transcript_182308.known	chr7	-	3131	19	FSM	ENSG00000106327.13	ENST00000462107.1	3131	19	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_18	6.16866834380018	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCTGTTGACATCTGTT	-100642571	False	150	NA	False	AATAAA	-18	NA	100642721	100620419	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100621127_100626762_100626904_100627263_100627492_100627576_100627662_100627743_100627821_100627906_100627975_100628072_100628137_100628223_100628307_100629252_100629373_100630888_100631053_100631805_100631946_100632081_100632199_100633000_100633124_100633228_100633341_100633415_100633557_100640685_100640873_100640975_100641229_100641476_100641767_100642690
transcript_182311.known	chr7	-	2421	15	FSM	ENSG00000106327.13	ENST00000476304.5	2421	15	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_11	4.86134272204959	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCGTGGAGTTTCAATATC	-100633556	True	NA	NA	False	NA	NA	NA	100633650	100620462	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100621127_100626762_100626904_100627263_100627492_100627576_100627662_100627743_100627821_100627906_100627975_100628072_100628137_100628223_100628307_100629252_100629373_100630888_100631053_100631805_100631946_100632081_100632199_100633000_100633124_100633228_100633341_100633415
transcript_18232.known	chr1	+	2399	11	FSM	ENSG00000176393.11	ENST00000295640.9	2399	11	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_3	67.7704950550016	2510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACGGATTGAGTGACTAT	201978894	True	NA	12	True	AATAAA	-20	NA	201982647	202006143	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_201983114_201988903_201989045_201989382_201989532_201996146_201996264_201997318_201997555_201999901_202000016_202001375_202001489_202001658_202001768_202003236_202003462_202004353_202004497_202005557
transcript_182320.known	chr7	-	610	3	FSM	ENSG00000106327.13	ENST00000475011.1	610	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTCTCTACTAAAAAAAAAAA	-100633464	True	NA	NA	False	NA	NA	NA	100633558	100632768	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100633124_100633228_100633341_100633415
transcript_182325.known	chr7	-	1524	14	FSM	ENSG00000077080.10	ENST00000160382.10	1524	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	12.1392317197408	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGCCTCCGTGGGGTGG	NA	False	NA	NA	False	AGTAAA	-20	NA	100656448	100643096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100643327_100646248_100646336_100646550_100646647_100646750_100646832_100646970_100647086_100647222_100647285_100647443_100647534_100648555_100648663_100648728_100648824_100650037_100650136_100655018_100655120_100655420_100655587_100655802_100655880_100656329
transcript_182326.known	chr7	+	1664	10	FSM	ENSG00000172354.10	ENST00000303210.9	1664	10	0	0	0	0	multi-exon	FALSE	canonical	3	543	junction_1	112.494938157728	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTCTCTGCCCTTGCTG	100669388	True	NA	29	True	CATAAA	-22	NA	100673739	100679169	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100673924_100676176_100676323_100676534_100676574_100676692_100676800_100677351_100677416_100677497_100677661_100677751_100677819_100678097_100678300_100678397_100678615_100678694
transcript_182338.known	chr7	+	1524	9	FSM	ENSG00000172354.10	ENST00000393924.1	1524	9	0	0	0	0	multi-exon	FALSE	canonical	3	731	junction_1	72.3583746017004	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCCCTTGCTGTGTTC	100675690	True	NA	34	True	CATAAA	-27	NA	100676137	100679174	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100676323_100676534_100676574_100676692_100676800_100677351_100677416_100677497_100677661_100677751_100677819_100678097_100678300_100678397_100678615_100678694
transcript_182340.nic	chr7	-	5999	28	NIC	ENSG00000146830.11	novel	5867	28	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_26	30.7397590204687	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCGCCTCCACTGCTCGT	-100689617	True	NA	-8	True	AATAAA	-20	NA	100694273	100679506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_100681772_100681863_100681994_100682071_100682236_100682321_100682483_100682589_100682778_100683011_100683231_100683303_100683445_100683549_100683633_100683817_100683919_100684019_100684158_100684236_100684338_100684449_100684617_100684722_100684895_100685048_100685147_100685343_100685482_100685973_100686080_100686179_100686434_100686648_100686820_100687005_100687047_100687297_100687407_100687504_100687617_100687787_100687884_100687980_100688111_100688203_100688308_100688450_100688516_100688591_100688719_100689301_100689556_100694109
transcript_182343.nic	chr7	-	4179	28	NIC	ENSG00000146830.11	novel	5867	28	NA	NA	-23	-1820	combination_of_known_junctions	FALSE	canonical	3	16	junction_26	30.7397590204687	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTTAGGAGGCTGAAAGAA	-100689617	True	NA	36	True	AAAAAG	-21	NA	100694273	100681326	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_100681772_100681863_100681994_100682071_100682236_100682321_100682483_100682589_100682778_100683011_100683231_100683303_100683445_100683549_100683633_100683817_100683919_100684019_100684158_100684236_100684338_100684449_100684617_100684722_100684895_100685048_100685147_100685343_100685482_100685973_100686080_100686179_100686434_100686648_100686820_100687005_100687047_100687297_100687407_100687504_100687617_100687787_100687884_100687980_100688111_100688203_100688308_100688450_100688516_100688591_100688719_100689301_100689556_100694109
transcript_182344.nnic	chr7	-	5711	27	NIC	ENSG00000146830.11	novel	6559	27	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_26	30.6054535496903	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCGCCTCCACTGCTCGT	-100689583	True	NA	-8	True	AATAAA	-20	NA	100694239	100679506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_100681772_100681863_100681994_100682071_100682236_100682321_100682483_100682589_100682778_100683011_100683231_100683303_100683445_100683549_100683633_100683817_100683919_100684019_100684158_100684236_100684338_100684449_100684617_100684722_100684895_100685048_100685147_100685343_100685482_100685973_100686080_100686179_100686434_100686648_100686820_100687005_100687047_100687297_100687407_100687504_100687617_100687787_100687884_100687980_100688111_100688203_100688308_100688450_100688516_100688591_100688719_100694109
transcript_182345.known	chr7	-	6559	27	FSM	ENSG00000146830.11	ENST00000678049.1	6559	27	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_26	29.1223952539183	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCGCCTCCACTGCTCGT	-100689594	True	NA	-8	True	AATAAA	-20	NA	100694250	100679506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100681772_100681863_100681994_100682071_100682236_100682321_100682483_100682589_100682778_100683011_100683231_100683303_100683445_100683549_100683633_100683817_100683919_100684019_100684158_100684236_100684338_100684449_100684617_100684722_100684895_100685048_100685147_100685343_100685482_100685973_100686080_100686179_100686434_100686648_100686820_100687005_100687047_100687297_100687407_100687504_100687617_100687787_100687884_100687980_100688111_100688203_100688308_100688450_100688516_100688591_100689556_100694109
transcript_182348.nnic	chr7	-	3946	27	NIC	ENSG00000146830.11	novel	6559	27	NA	NA	-44	-1820	combination_of_known_splicesites	FALSE	canonical	3	8	junction_26	30.6054535496903	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTTAGGAGGCTGAAAGAA	-100694273	False	NA	36	True	AAAAAG	-21	NA	100694294	100681326	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_100681772_100681863_100681994_100682071_100682236_100682321_100682483_100682589_100682778_100683011_100683231_100683303_100683445_100683549_100683633_100683817_100683919_100684019_100684158_100684236_100684338_100684449_100684617_100684722_100684895_100685048_100685147_100685343_100685482_100685973_100686080_100686179_100686434_100686648_100686820_100687005_100687047_100687297_100687407_100687504_100687617_100687787_100687884_100687980_100688111_100688203_100688308_100688450_100688516_100688591_100688719_100694109
transcript_1824.known	chr1	+	3105	7	FSM	ENSG00000169598.17	ENST00000338895.7	3105	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	11.823939933692	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAGACATGTCAAGAA	3857241	True	NA	NA	False	AATAAA	-9	NA	3857266	3885420	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_3857718_3858717_3858867_3865761_3866001_3867973_3868054_3869604_3869776_3872471_3872573_3883506
transcript_182403.known	chr7	+	850	2	FSM	ENSG00000172336.5	ENST00000303151.5	850	2	0	0	0	0	multi-exon	FALSE	canonical	3	638	junction_1	0	504	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGCCATCCCACTGCCA	100692697	True	NA	17	True	AATAAA	-19	NA	100706120	100707486	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100706305_100706820
transcript_182408.known	chr7	-	4353	17	FSM	ENSG00000196411.10	ENST00000358173.8	4353	17	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_7	56.2399991109531	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGGGGTGATGGACTAGA	-100818422	True	NA	-7	True	AATAAA	-32	NA	100827523	100802564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100803591_100805165_100805322_100805500_100805695_100806419_100806570_100807364_100807581_100812746_100812995_100813094_100813209_100813651_100813717_100813918_100814022_100817191_100817358_100818519_100818645_100819556_100819890_100820140_100820297_100822270_100822668_100823643_100823932_100824202_100824274_100826978
transcript_182414.known	chr7	-	3789	16	FSM	ENSG00000196411.10	ENST00000360620.7	3789	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	117.809941101005	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGGGGTGATGGACTAGA	-100827081	False	NA	-7	True	AATAAA	-32	NA	100827115	100802564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100803591_100805500_100805695_100806419_100806570_100807364_100807581_100812746_100812995_100813094_100813209_100813651_100813717_100813918_100814022_100817191_100817358_100818519_100818645_100819556_100819890_100820140_100820297_100822270_100822668_100823643_100823932_100824202_100824274_100826978
transcript_182431.nnic	chr7	+	3443	14	NNC	ENSG00000146828.18	novel	4128	10	NA	NA	-326	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	25.3442569618197	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCTGGCTGAGCAGTGC	100852168	True	NA	13	True	AATAAA	-14	NA	100852386	100867009	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_100852639_100854155_100854379_100854619_100854755_100855705_100855838_100856867_100857177_100858834_100858943_100859049_100859162_100859884_100860043_100860149_100860233_100861137_100861263_100861391_100861585_100861736_100861912_100862680_100862828_100865718
transcript_182432.nic	chr7	+	3608	14	NIC	ENSG00000146828.18	novel	3315	14	NA	NA	-290	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	23.6004713622569	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCTGGCTGAGCAGTGC	100852204	True	NA	13	True	AATAAA	-14	NA	100852422	100867009	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_100852840_100854155_100854379_100854619_100854755_100855705_100855838_100856867_100857177_100858834_100858943_100859049_100859162_100859884_100860043_100860149_100860233_100861137_100861263_100861391_100861585_100861736_100861912_100862680_100862828_100865718
transcript_182433.known	chr7	+	3315	14	FSM	ENSG00000146828.18	ENST00000354161.8	3315	14	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	24.0083811795778	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTGGCTGAGCAGTGCT	100850419	True	NA	14	True	AATAAA	-15	NA	100852712	100867010	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100852836_100854155_100854379_100854619_100854755_100855705_100855838_100856867_100857177_100858834_100858943_100859049_100859162_100859884_100860043_100860149_100860233_100861137_100861263_100861391_100861585_100861736_100861912_100862680_100862828_100865718
transcript_182460.nic	chr7	+	3054	12	NIC	ENSG00000146828.18	novel	1912	12	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	24.0306278399081	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCTGGCTGAGCAGTGC	100850416	True	NA	13	True	AATAAA	-14	NA	100852709	100867009	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_100852840_100854155_100854379_100856867_100857177_100858834_100858943_100859049_100859162_100859884_100860043_100860149_100860233_100861137_100861263_100861391_100861585_100861736_100861912_100862680_100862828_100865718
transcript_182465.nic	chr7	+	3050	12	NIC	ENSG00000146828.18	novel	3315	14	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	24.5481480003672	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCTGGCTGAGCAGTGC	100850416	True	NA	13	True	AATAAA	-14	NA	100852709	100867009	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_100852836_100854155_100854379_100856867_100857177_100858834_100858943_100859049_100859162_100859884_100860043_100860149_100860233_100861137_100861263_100861391_100861585_100861736_100861912_100862680_100862828_100865718
transcript_182471.nnic	chr7	+	2924	11	NIC	ENSG00000146828.18	novel	4128	10	NA	NA	5	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	23.8472220604413	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCTGGCTGAGCAGTGC	100826728	True	NA	13	True	AATAAA	-14	NA	100826824	100867009	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_100827048_100856867_100857177_100858834_100858943_100859049_100859162_100859884_100860043_100860149_100860233_100861137_100861263_100861391_100861585_100861736_100861912_100862680_100862828_100865718
transcript_182475.nnic	chr7	+	2945	11	NNC	ENSG00000146828.18	novel	4128	10	NA	NA	-318	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	23.3042914502887	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCTGGCTGAGCAGTGC	100852176	True	NA	13	True	AATAAA	-14	NA	100852394	100867009	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_100852639_100856867_100857177_100858834_100858943_100859049_100859162_100859884_100860043_100860149_100860233_100861137_100861263_100861391_100861585_100861736_100861912_100862680_100862828_100865718
transcript_182476.nic	chr7	+	3139	11	NIC	ENSG00000146828.18	novel	3315	14	NA	NA	-315	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	21.4280190404993	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCTGGCTGAGCAGTGC	100852179	True	NA	13	True	AATAAA	-14	NA	100852397	100867009	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_100852836_100856867_100857177_100858834_100858943_100859049_100859162_100859884_100860043_100860149_100860233_100861137_100861263_100861391_100861585_100861736_100861912_100862680_100862828_100865718
transcript_182482.nic	chr7	+	3022	11	NIC	ENSG00000146828.18	novel	3315	14	NA	NA	-284	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_2	26.9557044055614	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCTGGCTGAGCAGTGC	100852210	True	NA	13	True	AATAAA	-14	NA	100852428	100867009	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_100852836_100854155_100854379_100858834_100858943_100859049_100859162_100859884_100860043_100860149_100860233_100861137_100861263_100861391_100861585_100861736_100861912_100862680_100862828_100865718
transcript_182489.nic	chr7	+	2834	10	NIC	ENSG00000146828.18	novel	4433	9	NA	NA	-315	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	22.944377185804	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCTGGCTGAGCAGTGC	100852179	True	NA	13	True	AATAAA	-14	NA	100852397	100867009	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_100852840_100858834_100858943_100859049_100859162_100859884_100860043_100860149_100860233_100861137_100861263_100861391_100861585_100861736_100861912_100862680_100862828_100865718
transcript_1825.known	chr1	+	2731	7	FSM	ENSG00000169598.17	ENST00000475969.5	2731	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	11.823939933692	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTCAAGAAAGTTTGCAC	3856978	False	NA	NA	False	AATAAA	-18	NA	3857599	3885429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_3857718_3858717_3858867_3865811_3866001_3867973_3868054_3869604_3869776_3872471_3872573_3883506
transcript_182512.known	chr7	+	1693	9	FSM	ENSG00000087077.14	ENST00000200457.9	1693	9	0	0	0	0	multi-exon	FALSE	canonical	3	666	junction_3	63.1050711115993	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCAAGTCTGTTGTCTCA	100859670	True	NA	15	True	AAGAAA	-27	NA	100867386	100873454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100867607_100867860_100867989_100868107_100868234_100868494_100868867_100870369_100870464_100870573_100870744_100871542_100871722_100872623_100872745_100873171
transcript_182523.nic	chr7	+	2752	8	NIC	ENSG00000087077.14	novel	1693	9	NA	NA	-261	0	intron_retention	FALSE	canonical	3	666	junction_3	64.3022201032288	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCAAGTCTGTTGTCTC	100867111	True	NA	14	True	AAGAAA	-26	NA	100867125	100873453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_100867607_100867860_100867989_100868107_100868234_100868494_100868867_100870369_100870464_100870573_100871722_100872623_100872745_100873171
transcript_182535.known	chr7	+	1303	8	FSM	ENSG00000087077.14	ENST00000619988.4	1303	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	268.012488286555	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTCCTAGAAGTACCTGC	100859781	False	NA	NA	False	NA	NA	NA	100867497	100873303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100867607_100868107_100868234_100868494_100868867_100870369_100870464_100870573_100870744_100871542_100871722_100872623_100872745_100873171
transcript_18256.known	chr1	+	2282	10	FSM	ENSG00000176393.11	ENST00000367286.7	2282	10	0	0	0	0	multi-exon	FALSE	canonical	2	47	junction_3	172.220860209668	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGATTGAGTGACTATTAAA	201978898	True	NA	16	True	AATAAA	-24	NA	201982651	202006147	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_201983114_201988903_201989045_201989382_201989532_201997318_201997555_201999901_202000016_202001375_202001489_202001658_202001768_202003236_202003462_202004353_202004497_202005557
transcript_182564.known	chr7	+	2955	20	FSM	ENSG00000087087.20	ENST00000618262.4	2955	20	0	0	0	0	multi-exon	TRUE	canonical	3	329	junction_17	184.710314484623	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTCTCGTGTGTTA	100858214	True	NA	19	True	AATAAA	-16	NA	100875125	100888664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100875329_100875572_100875713_100881284_100881414_100881658_100881806_100882052_100882242_100884069_100884240_100884367_100884553_100884739_100884839_100884922_100885041_100885212_100885371_100885700_100885763_100885862_100885942_100886246_100886436_100886794_100886969_100887046_100887201_100887319_100887514_100887702_100887860_100888053_100888144_100888256_100888384_100888473
transcript_182565.known	chr7	+	2893	20	FSM	ENSG00000087087.20	ENST00000618411.4	2893	20	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_17	190.937633942085	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTCTCGTGTGTTA	100858273	True	NA	19	True	AATAAA	-16	NA	100875184	100888664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100875329_100875572_100875713_100881284_100881414_100881658_100881806_100882052_100882242_100884069_100884240_100884367_100884553_100884739_100884839_100884922_100885041_100885215_100885371_100885700_100885763_100885862_100885942_100886246_100886436_100886794_100886969_100887046_100887201_100887319_100887514_100887702_100887860_100888053_100888144_100888256_100888384_100888473
transcript_182566.known	chr7	-	995	1	FSM	ENSG00000176125.7	ENST00000388761.4	995	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAGGAGTTACTCTGGAA	-100889307	True	NA	-18	True	AATAAA	-21	NA	100889715	100888720	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100888700_100889700
transcript_182568.known	chr7	-	2172	5	FSM	ENSG00000087085.16	ENST00000241069.11	2172	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	8.44097150806707	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGAGTGTGCGCGACTAGG	-100895705	True	NA	-4	True	AATAAA	-13	NA	100895888	100889993	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100890336_100891168_100891339_100892333_100892819_100893164_100894253_100895801
transcript_182570.known	chr7	-	2956	5	FSM	ENSG00000087085.16	ENST00000302913.8	2956	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	7.58287544405155	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGGAGTGTGCGCGACTAG	-100895737	True	NA	-5	True	AATAAA	-12	NA	100895920	100889994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_100891089_100891168_100891339_100892333_100892819_100893164_100894253_100895801
transcript_182573.nic	chr7	-	1967	5	NIC	ENSG00000087085.16	novel	2956	5	NA	NA	1	-508	intron_retention	FALSE	canonical	1	3	junction_3	11.0227038425243	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTGAGCCTGACATTGG	-100895736	True	NA	-7	True	TATAAA	-12	NA	100895919	100890718	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_100891089_100891168_100891339_100892333_100892555_100893164_100894253_100895801
transcript_182580.nic	chr7	-	652	2	ISM	ENSG00000087085.16	ENST00000412389.5	2218	4	2910	-3	2755	0	3prime_fragment	FALSE	canonical	3	30	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGAGTGTGCGCGACTAGG	-100891295	False	NA	-4	True	AATAAA	-13	NA	100891478	100889993	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_100890336_100891168
transcript_182585.known	chr7	+	1093	4	FSM	ENSG00000169894.18	ENST00000614399.1	1093	4	0	0	0	0	multi-exon	FALSE	canonical	3	366	junction_1	52.8162432927178	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCATCCTGCACCCCAGT	100965985	True	NA	NA	False	NA	NA	NA	100966237	100967746	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_100966560_100966651_100966744_100966898_100966952_100967120
transcript_182587.nnic	chr7	-	509	4	NNC	ENSG00000227053.2	novel	442	3	NA	NA	39	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18.006171781426	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACCCAGTGGTGGTATT	-101017038	True	NA	-6	True	AATAAA	-16	NA	101017569	101014324	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_101014440_101015197_101015268_101015439_101015609_101017414
transcript_182588.known	chr7	+	502	3	FSM	ENSG00000205277.10	ENST00000473098.5	502	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	14	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAAGTGAGAGGTTTCCT	101016790	False	NA	16	True	AATAAA	-22	NA	101016877	101018939	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_101016946_101017574_101017664_101018594
transcript_182589.known	chr7	-	372	3	FSM	ENSG00000227053.2	ENST00000448513.2	442	3	64	6	7	-5	multi-exon	FALSE	canonical	3	23	junction_2	10	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACCCAGTGGTGGTATT	-101017070	True	NA	-6	True	AATAAA	-16	NA	101017601	101014324	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_101014440_101015197_101015268_101017414
transcript_182591.known	chr7	+	675	2	FSM	ENSG00000205277.10	ENST00000474482.1	675	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAAGTGAGAGGTTTCCT	101017152	False	NA	16	True	AATAAA	-22	NA	101017333	101018939	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_101017664_101018594
transcript_182595.known	chr7	+	10910	3	FSM	ENSG00000169871.13	ENST00000306085.11	10910	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0.5	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTCTCAGAAGGGTTTA	101083940	True	NA	7	True	AATAAA	-21	NA	101085480	101097967	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_101085572_101087005_101087169_101087311
transcript_182599.known	chr7	+	3156	9	FSM	ENSG00000106366.9	ENST00000223095.5	3156	9	0	0	0	0	multi-exon	TRUE	canonical	2	11	junction_3	3.07205143186113	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATGTCAGGACAGTCAC	101126983	True	NA	10	True	AATAAA	-16	NA	101127103	101139247	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_101127245_101128392_101128665_101130420_101130655_101131874_101132070_101133694_101133894_101135493_101135595_101135714_101135802_101137000_101137085_101137404
transcript_182603.known	chr7	+	1226	5	FSM	ENSG00000106367.15	ENST00000337619.11	1226	5	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_1	40.3260151763102	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTGGCCTTGGGCTCT	101148317	True	NA	12	True	AATAAA	-19	NA	101154475	101161276	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_101154518_101156593_101156773_101157376_101157486_101159058_101159197_101160518
transcript_182605.known	chr7	+	573	5	FSM	ENSG00000106367.15	ENST00000429457.1	573	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	107.728826225853	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGCTGGAGGAGATGGGT	101148366	False	NA	NA	False	NA	NA	NA	101154524	101160537	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_101154653_101156593_101156773_101157376_101157486_101159058_101159197_101160518
transcript_182607.known	chr7	+	779	5	FSM	ENSG00000106367.15	ENST00000646560.1	779	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	117.22734322674	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCCTGCCTTTGCAGAA	101154911	True	NA	NA	False	NA	NA	NA	101154984	101160827	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_101155029_101156593_101156773_101157376_101157486_101159058_101159197_101160518
transcript_182608.known	chr7	-	2551	2	FSM	ENSG00000128564.8	ENST00000249330.3	2551	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTCTCGGTTATTCAC	-101165347	True	NA	-1	True	AATAAA	-20	NA	101165569	101162508	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_101164864_101165373
transcript_182609.known	chr7	-	2147	7	FSM	ENSG00000106384.12	ENST00000223114.9	2147	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.15470053837925	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGTTGGGCATTGGGAT	-101201000	True	NA	NA	False	AATAAA	-18	NA	101201036	101195006	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_101196101_101196186_101196390_101198190_101198366_101198625_101198831_101200233_101200305_101200407_101200516_101200745
transcript_18261.nic	chr1	+	2322	10	NIC	ENSG00000176393.11	novel	2399	11	NA	NA	-72	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_2	176.967668107922	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACGGATTGAGTGACTAT	NA	False	NA	12	True	AATAAA	-20	NA	201982575	202006143	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_201983114_201988903_201989045_201996146_201996264_201997318_201997555_201999901_202000016_202001375_202001489_202001658_202001768_202003236_202003462_202004353_202004497_202005557
transcript_182614.nnic	chr7	-	2677	20	NNC	ENSG00000106397.12	novel	2821	19	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	37.2876072035942	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGAGTCCATTGGTCTG	-101216106	True	NA	-11	True	AATAAA	-14	NA	101217608	101205983	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_101206437_101206778_101206905_101207577_101207725_101208852_101208958_101210092_101210162_101210330_101210445_101210531_101210674_101211590_101211717_101211845_101211951_101212252_101212375_101212529_101212656_101212841_101212944_101213106_101213205_101215088_101215153_101215907_101216021_101216162_101216327_101216409_101216547_101216694_101216787_101217165_101217225_101217395
transcript_182622.known	chr7	+	728	5	FSM	ENSG00000106400.12	ENST00000305105.3	728	5	0	0	0	0	multi-exon	FALSE	canonical	3	688	junction_1	165.808624624897	336	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTCCTGTTTGGTCGTGG	101206560	True	NA	15	True	AATAAA	-17	NA	101218164	101224190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_101218218_101222603_101222775_101223476_101223557_101223672_101223843_101223936
transcript_182624.known	chr7	-	2821	19	FSM	ENSG00000106397.12	ENST00000223127.8	2821	19	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_7	18.7077095086953	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGAGTCCATTGGTCTG	-101216079	True	NA	-11	True	AATAAA	-14	NA	101217581	101205983	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_101206437_101206778_101206905_101207577_101207725_101208852_101208958_101210092_101210162_101210330_101210445_101210531_101210674_101211590_101211717_101211845_101211951_101212252_101212375_101212529_101212656_101212841_101212944_101213106_101213205_101215088_101215153_101215907_101216021_101216162_101216327_101216409_101216547_101216694_101216787_101217165
transcript_182630.nnic	chr7	-	3836	9	Fusion	ENSG00000214253.9_ENSG00000106404.14	novel	2131	6	NA	NA	-19	0	multi-exon	FALSE	canonical	1	4	junction_3	274.450359810294	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGCTTGAAGGTGTCAGA	-101251241	True	NA	-30	True	AATAAA	-18	NA	101252335	101232093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr7_-_101232516_101232603_101232721_101232832_101232915_101234277_101234443_101237364_101237825_101237937_101239904_101240141_101240248_101240829_101240907_101251894
transcript_182641.known	chr7	-	870	5	FSM	ENSG00000214253.9	ENST00000223136.5	870	5	0	0	0	0	multi-exon	FALSE	canonical	3	486	junction_3	78.1040972036679	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTCCTTCCTCCCTTTCC	-101231864	True	NA	NA	False	NA	NA	NA	101245081	101239471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101244006_101244140_101244959
transcript_182642.known	chr7	-	1005	5	FSM	ENSG00000214253.9	ENST00000473527.5	1005	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	265.854283395999	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCGTGTCTGCGTTGAGG	-101251197	True	NA	-4	True	AATAAA	-21	NA	101252291	101239611	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101244006_101244140_101251894
transcript_182644.known	chr7	-	745	4	FSM	ENSG00000214253.9	ENST00000449367.5	745	4	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_3	248.476692401253	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCCTGAAGCCATGTCCT	-101231858	True	NA	NA	False	NA	NA	NA	101245075	101239457	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101244959
transcript_182645.known	chr7	-	915	4	FSM	ENSG00000214253.9	ENST00000474120.5	915	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	284.267870541541	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGAGGGGTGGGTTCTGAA	-101251222	True	NA	14	True	AATAAA	-39	NA	101252316	101239593	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101251894
transcript_182646.known	chr7	-	631	4	FSM	ENSG00000214253.9	ENST00000442303.1	631	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_3	304.521847419123	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTGCGTTGAGGGGAGG	-101231831	True	NA	1	True	AATAAA	-26	NA	101245048	101239606	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101244897
transcript_182648.known	chr7	+	867	2	FSM	ENSG00000232301.3	ENST00000429254.3	887	2	20	0	20	0	multi-exon	FALSE	canonical	3	765	junction_1	0	241	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGTCGATTTTGCAAGAT	101289348	True	NA	12	True	AATAAA	-17	NA	101299577	101301346	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_101299867_101300768
transcript_18265.known	chr1	+	2093	10	FSM	ENSG00000176393.11	ENST00000471105.5	2093	10	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	225.36094505383	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGATTGAGTGACTATTAAA	201982925	False	NA	16	True	AATAAA	-24	NA	201982954	202006147	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_201983114_201988903_201989045_201996146_201996410_201997318_201997555_201999901_202000016_202001375_202001489_202001658_202001768_202003236_202003462_202004353_202004497_202005557
transcript_182651.known	chr7	-	4881	5	FSM	ENSG00000128581.17	ENST00000315322.10	4881	5	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_3	18.6731759484026	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTAAGTTTTGAGAGTT	-101319978	True	NA	-6	True	ATTAAA	-26	NA	101321812	101310913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_101315283_101316339_101316543_101318123_101318214_101318955_101319033_101321670
transcript_182653.known	chr7	-	917	4	FSM	ENSG00000128581.17	ENST00000498704.6	917	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	75.4733212613717	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAACAAATACCGACTGGC	-101319930	True	NA	-25	True	NA	NA	NA	101321764	101314752	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_101315283_101316339_101316543_101318123_101318214_101321670
transcript_182654.nic	chr7	-	532	4	ISM	ENSG00000128581.17	ENST00000422177.5	1785	6	-29	2637	0	-506	5prime_fragment	FALSE	canonical	3	165	junction_2	14.9888847706114	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAATTTCTCTTCCTCTT	-101319989	True	NA	3	True	GATAAA	-26	NA	101321823	101316330	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_101316543_101318123_101318214_101318955_101319033_101321670
transcript_182657.known	chr7	+	1194	3	FSM	ENSG00000232445.2	ENST00000419422.2	1194	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	1.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTTGAGGTGGTCAA	101297684	True	NA	10	True	ATTAAA	-17	NA	101308295	101311343	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_101308549_101309613_101309695_101310483
transcript_182658.known	chr7	-	567	3	FSM	ENSG00000128581.17	ENST00000495166.1	567	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	101	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATCACATCCAGCTCCTG	-101319989	True	NA	NA	False	NA	NA	NA	101321823	101315071	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_101315283_101316339_101316543_101321670
transcript_182660.known	chr7	-	923	3	FSM	ENSG00000128581.17	ENST00000485695.1	923	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	68.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTACTCAGGAGGCTGAG	-101319951	True	NA	NA	False	AATACA	-38	NA	101321785	101315824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_101316543_101318123_101318214_101321670
transcript_182661.known	chr7	+	4596	2	FSM	ENSG00000232445.2	ENST00000663483.1	4596	2	0	0	0	0	multi-exon	FALSE	canonical	3	480	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTTGTATCATTGGGCT	101297658	True	NA	NA	False	ATTAAA	-2	NA	101308269	101314800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_101308549_101310483
transcript_182684.known	chr7	+	2978	13	FSM	ENSG00000160963.14	ENST00000313669.12	2978	13	0	0	0	0	multi-exon	TRUE	canonical	3	179	junction_2	48.7125212057662	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTCTGTTTGTGTGGT	101357067	True	NA	19	True	AATAAA	-15	NA	101362874	101559024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_101363191_101419976_101420100_101447683_101447788_101533081_101533144_101539892_101540050_101543997_101544097_101545337_101545491_101547155_101547240_101549170_101549224_101551107_101551144_101553325_101553377_101555786_101555872_101557369
transcript_182690.known	chr7	+	2970	13	FSM	ENSG00000160963.14	ENST00000613501.1	2970	13	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_2	48.7125212057662	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTCTGTTTGTGTGGT	101357069	True	NA	19	True	AATAAA	-15	NA	101362876	101559024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_101363191_101419976_101420100_101447689_101447788_101533081_101533144_101539892_101540050_101543997_101544097_101545337_101545491_101547155_101547240_101549170_101549224_101551107_101551144_101553325_101553377_101555786_101555872_101557369
transcript_1827.nnic	chr1	-	1153	7	NNC	ENSG00000116198.14	novel	1661	4	NA	NA	0	1291	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	32.86335345031	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTGATTTAGACTTTA	-3853969	True	NA	-8	True	AATAAA	-12	NA	3857211	3841817	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_3842068_3844906_3844984_3845288_3845352_3847474_3847614_3848607_3848782_3852294_3852422_3856888
transcript_182728.known	chr7	+	2929	23	FSM	ENSG00000257923.12	ENST00000622516.6	2929	23	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_18	30.189621116213	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGTGCCCTGTGCTCTG	101812596	True	NA	13	True	AATAAA	-16	NA	101816006	102283958	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_101816094_101916114_101916226_102028097_102028146_102070338_102070418_102097363_102097502_102104335_102104460_102111697_102111775_102115206_102115274_102158559_102158609_102170445_102170551_102178468_102178658_102189812_102189872_102193841_102193891_102195506_102195604_102273365_102273494_102274243_102274311_102275246_102275360_102277948_102278066_102280036_102280121_102280803_102280861_102281839_102281921_102282711_102282777_102283020
transcript_182729.known	chr7	+	3026	23	FSM	ENSG00000257923.12	ENST00000437600.9	3026	23	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_10	38.1300785805902	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGTGCCCTGTGCTCTG	101815620	False	NA	13	True	AATAAA	-16	NA	101815903	102283958	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_101816094_101916114_101916226_102028097_102028146_102070338_102070418_102097363_102097502_102104335_102104460_102111697_102111775_102115206_102115274_102158559_102158609_102170445_102170551_102178474_102178658_102189812_102189872_102193841_102193891_102195506_102195604_102273365_102273494_102274243_102274311_102275246_102275360_102277948_102278066_102280036_102280121_102280803_102280861_102281839_102281921_102282711_102282777_102283020
transcript_182734.known	chr7	+	2776	22	FSM	ENSG00000257923.12	ENST00000425244.6	2776	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	47.1972269449437	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGGTGCCCTGTGCTCT	101812610	True	NA	12	True	AATAAA	-15	NA	101816020	102283957	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_101816094_101916114_101916226_102028097_102028146_102070338_102070418_102104335_102104460_102111697_102111775_102115206_102115274_102158559_102158609_102170445_102170551_102178468_102178658_102189812_102189872_102193841_102193891_102195506_102195604_102273365_102273494_102274243_102274311_102275246_102275360_102277948_102278066_102280036_102280121_102280803_102280861_102281839_102281921_102282711_102282777_102283020
transcript_182736.known	chr7	+	2878	22	FSM	ENSG00000257923.12	ENST00000547394.6	2878	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	45.7232630074162	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGGTGCCCTGTGCTCT	101812598	True	NA	12	True	AATAAA	-15	NA	101816008	102283957	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_101816094_101916114_101916226_102070338_102070418_102097363_102097502_102104335_102104460_102111697_102111775_102115206_102115274_102158559_102158609_102170445_102170551_102178468_102178658_102189812_102189872_102193841_102193891_102195506_102195604_102273365_102273494_102274243_102274311_102275246_102275360_102277948_102278066_102280036_102280121_102280803_102280861_102281839_102281921_102282711_102282777_102283020
transcript_182738.nic	chr7	+	3136	8	ISM	ENSG00000257923.12	ENST00000645010.1	13651	22	-206	140814	-156	1749	5prime_fragment	FALSE	canonical	3	171	junction_7	20.8864764371395	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCAATATTGGGCCTATTT	101815726	False	NA	NA	False	NA	NA	NA	101815747	102117419	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_101816094_101916114_101916226_102028097_102028146_102070338_102070418_102097363_102097502_102104335_102104460_102111697_102111775_102115206
transcript_182739.known	chr7	+	559	2	FSM	ENSG00000257923.12	ENST00000607092.1	559	2	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGTGGGGTGGAAGGTC	101812597	True	NA	NA	False	NA	NA	NA	101816007	101916587	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_101816094_101916114
transcript_182742.nic	chr7	+	2289	9	FSM	ENSG00000160999.11	ENST00000444095.3	2236	9	-53	0	-53	0	multi-exon	FALSE	canonical	3	130	junction_5	17.1664644001029	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGGCTCTCCTGTCGTCCT	102286017	True	NA	11	True	ATTAAA	-21	NA	102286814	102321711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_102287095_102300521_102301280_102306720_102306823_102308814_102308907_102314335_102314428_102314511_102314683_102317186_102317396_102320330_102320503_102321298
transcript_182743.nnic	chr7	+	2265	9	NNC	ENSG00000160999.11	novel	2236	9	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	53.6534015697048	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGGCTCTCCTGTCGTCCT	102286017	True	NA	11	True	ATTAAA	-21	NA	102286814	102321711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_102287095_102300521_102301280_102306720_102306823_102308814_102308907_102314335_102314428_102314535_102314683_102317186_102317396_102320330_102320503_102321298
transcript_182745.nnic	chr7	+	1508	8	NIC	ENSG00000160999.11	novel	2236	9	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_1	56.340075271805	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGGCTCTCCTGTCGTCCT	102286040	True	NA	11	True	ATTAAA	-21	NA	102286837	102321711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_102287095_102306720_102306823_102308814_102308907_102314335_102314428_102314511_102314683_102317186_102317396_102320330_102320503_102321298
transcript_182748.known	chr7	+	3430	10	FSM	ENSG00000128563.13	ENST00000496391.5	3430	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	69.2964645562817	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTTTCTCTGTCTGGG	102362138	True	NA	17	True	AATAAA	-32	NA	102363896	102426676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_102364412_102365954_102366077_102375822_102375950_102376211_102376323_102395976_102396538_102397619_102397699_102399547_102399649_102404597_102404684_102407433_102407499_102425013
transcript_182750.known	chr7	+	1625	9	FSM	ENSG00000128563.13	ENST00000482549.5	1625	9	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	63.3806703577676	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTTGTTGGGACATGTGG	102362136	True	NA	17	True	AGTAAA	-17	NA	102363894	102425449	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_102364412_102365973_102366077_102375822_102375950_102376211_102376323_102397619_102397699_102399547_102399649_102404597_102404684_102407433_102407499_102425013
transcript_182756.nic	chr7	+	2868	8	NIC	ENSG00000128563.13	novel	1625	9	NA	NA	-82	0	combination_of_known_junctions	TRUE	canonical	2	7	junction_4	70.9607537405612	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGAAACCTGTTTTTC	102362031	True	NA	7	True	AATAAA	-22	NA	102363789	102426666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_102364412_102365973_102366077_102375822_102375950_102376211_102376323_102399547_102399649_102404597_102404684_102407433_102407499_102425013
transcript_182757.nic	chr7	+	2837	8	NIC	ENSG00000128563.13	novel	3430	10	NA	NA	-75	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	75.603152941487	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGAAACCTGTTTTTC	102362038	True	NA	7	True	AATAAA	-22	NA	102363796	102426666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_102364412_102375822_102375950_102376211_102376323_102397619_102397699_102399547_102399649_102404597_102404684_102407433_102407499_102425013
transcript_182767.known	chr7	+	602	5	FSM	ENSG00000239969.6	ENST00000492837.1	602	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	33.6191909480285	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTTGGTCTCATCATTA	102364265	False	NA	35	True	TATAAA	-38	NA	102364297	102380631	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_102364412_102365973_102366077_102375822_102375950_102376211_102376323_102380484
transcript_182770.known	chr7	+	2159	6	FSM	ENSG00000128563.13	ENST00000397912.3	2159	6	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	23.1948270094864	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGAAACCTGTTTTTC	102393832	True	NA	7	True	AATAAA	-22	NA	102396362	102426666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_102396538_102397619_102397699_102399547_102399649_102404597_102404684_102407433_102407499_102425013
transcript_182771.known	chr7	+	2257	8	FSM	ENSG00000128563.13	ENST00000482465.5	2257	8	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	61.4073052890057	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGAAACCTGTTTTTC	102366031	False	NA	7	True	AATAAA	-22	NA	102366041	102426666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_102366077_102375822_102375950_102376211_102376323_102397619_102397699_102399547_102399649_102404597_102404684_102407433_102407499_102425013
transcript_182772.known	chr7	+	10747	4	FSM	ENSG00000160991.17	ENST00000495936.7	10747	4	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	7.54247233265651	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCCCATTTTTTTTTTTT	102431858	True	NA	NA	False	AATAAA	-19	NA	102433574	102456825	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_102433662_102436224_102436334_102438943_102439182_102446512
transcript_182773.known	chr7	+	10811	4	FSM	ENSG00000160991.17	ENST00000356387.6	10811	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	54.2115198909686	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTTCCCATTTTTTTT	102431813	True	NA	NA	False	AATAAA	-15	NA	102433529	102456821	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_102433662_102436201_102436334_102438943_102439182_102446512
transcript_182774.known	chr7	+	758	3	FSM	ENSG00000160991.17	ENST00000488996.1	758	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	50	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGGGCCGAGGGCCGGG	102431832	True	NA	NA	False	NA	NA	NA	102433548	102447048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_102433662_102436224_102436334_102446512
transcript_182775.known	chr7	+	10637	3	FSM	ENSG00000160991.17	ENST00000611770.5	10637	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	50	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCCCATTTTTTTTTTTT	102431859	True	NA	NA	False	AATAAA	-19	NA	102433575	102456825	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_102433662_102438943_102439182_102446512
transcript_182776.known	chr7	-	1405	3	FSM	ENSG00000160993.4	ENST00000490528.1	1405	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	55	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGAACATTTTAAATGATT	-102463566	True	NA	NA	False	NA	NA	NA	102464863	102456833	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_102457982_102459603_102459711_102464713
transcript_182777.known	chr7	-	2092	3	FSM	ENSG00000160993.4	ENST00000292566.4	2092	3	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	26.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCTCACCTCCCACTACA	-102463566	True	NA	-20	True	AATAAA	-20	NA	102464863	102456237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_102457982_102459603_102459802_102464713
transcript_182784.known	chr7	+	2160	15	FSM	ENSG00000161036.13	ENST00000292616.10	2160	15	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_9	26.4074239716093	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGGAAAGGTGTTTCG	102461486	True	NA	19	True	ATTAAA	-19	NA	102464983	102473168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_102465161_102465816_102466052_102466153_102466271_102467338_102467480_102467718_102467824_102468061_102468188_102468262_102468378_102468553_102468655_102468854_102469063_102469573_102469647_102469741_102469883_102472217_102472310_102472453_102472610_102472691_102472805_102472908
transcript_182790.nic	chr7	+	2398	14	NIC	ENSG00000161036.13	novel	2160	15	NA	NA	-34	0	intron_retention	TRUE	canonical	3	126	junction_8	27.3913129234186	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGGAAAGGTGTTTCG	102461424	True	NA	19	True	ATTAAA	-19	NA	102464921	102473168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_102465161_102465816_102466052_102466153_102466271_102467338_102467480_102467718_102467824_102468061_102468188_102468262_102468655_102468854_102469063_102469573_102469647_102469741_102469883_102472217_102472310_102472453_102472610_102472691_102472805_102472908
transcript_182797.nic	chr7	+	2581	13	NIC	ENSG00000161036.13	novel	2160	15	NA	NA	-17	0	intron_retention	FALSE	canonical	3	126	junction_7	28.1908180481202	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGGAAAGGTGTTTCG	102461441	True	NA	19	True	ATTAAA	-19	NA	102464938	102473168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_102465161_102465816_102466052_102466153_102466271_102467338_102467480_102467718_102467824_102468061_102468188_102468262_102469063_102469573_102469647_102469741_102469883_102472217_102472310_102472453_102472610_102472691_102472805_102472908
transcript_182813.known	chr7	-	932	4	FSM	ENSG00000005075.16	ENST00000292614.10	937	4	15	-10	15	10	multi-exon	FALSE	canonical	3	2609	junction_3	82.8908251188809	336	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCCCATCGGCCCAAAGC	-102468978	True	NA	-1	True	AATAAA	-25	NA	102478907	102473117	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_102473685_102474360_102474536_102476180_102476271_102478807
transcript_182826.known	chr7	-	5604	21	FSM	ENSG00000105808.19	ENST00000262940.12	5604	21	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_10	16.3935200612925	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGCCTGGTCCTACCAGA	-102616711	True	NA	NA	False	AATAAA	-18	NA	102616756	102579645	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_102582893_102583003_102583069_102584217_102584339_102587634_102587771_102590158_102590297_102592284_102592455_102592993_102593139_102593706_102593845_102594049_102594243_102594446_102594560_102595304_102595370_102595633_102595785_102596011_102596130_102599859_102599955_102600256_102600389_102602323_102602406_102605857_102605988_102608760_102608823_102609340_102609455_102611085_102611143_102616624
transcript_182828.known	chr7	-	3244	20	FSM	ENSG00000105808.19	ENST00000461209.5	3244	20	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_10	15.8879385949778	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTCTGGGGTCTTGTGA	-102611546	False	NA	NA	False	AGTAAA	-16	NA	102611591	102582322	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_102582893_102583003_102583069_102584217_102584339_102587634_102587771_102590158_102590297_102592284_102592455_102592993_102593139_102593706_102593845_102594049_102594243_102594446_102594560_102595304_102595370_102595633_102595785_102596011_102596130_102599859_102599955_102600256_102600389_102602323_102602406_102605857_102605988_102608760_102608823_102609340_102609455_102611085
transcript_182830.known	chr7	-	2787	20	FSM	ENSG00000105808.19	ENST00000449970.6	2787	20	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	15.6615873575943	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGGCTCTGGGGTCTTGT	-102616711	True	NA	NA	False	AGTAAA	-14	NA	102616756	102582324	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_102582893_102583003_102583069_102584217_102584339_102587634_102587771_102592284_102592455_102592993_102593139_102593706_102593845_102594049_102594243_102594446_102594560_102595304_102595370_102595633_102595785_102596011_102596130_102599859_102599955_102600256_102600389_102602323_102602406_102605857_102605988_102608760_102608823_102609340_102609455_102611085_102611143_102616624
transcript_18284.known	chr1	+	3104	9	FSM	ENSG00000163435.16	ENST00000367284.10	3104	9	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	4.51213641194501	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAAGCTTGTGTGTGGATT	202010310	True	NA	NA	False	GATAAA	-19	NA	202010586	202017183	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_202010707_202011128_202011300_202011956_202012179_202012343_202012437_202012639_202012760_202012946_202013037_202013181_202013299_202013828_202014025_202015208
transcript_182854.nnic	chr7	-	2681	11	NNC	ENSG00000168255.20	novel	1532	8	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	234.441485236722	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCTGTCCGTGACATC	NA	False	NA	-20	True	AATAAA	-15	NA	102572669	102537919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_102538526_102539605_102539727_102540014_102540092_102541092_102541304_102541500_102541663_102543524_102544089_102544329_102544777_102545302_102545421_102566996_102567084_102569834_102569925_102572471
transcript_182879.nnic	chr7	-	2563	10	NNC	ENSG00000168255.20	novel	1532	8	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	226.374812104959	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCTGTCCGTGACATC	NA	False	NA	-20	True	AATAAA	-15	NA	102572669	102537919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_102538526_102539605_102539727_102540014_102540092_102541092_102541304_102541500_102541663_102543524_102544089_102544329_102544777_102566996_102567084_102569834_102569925_102572471
transcript_182887.nnic	chr7	-	2571	10	NNC	ENSG00000267645.5	novel	1598	9	NA	NA	-114	24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	218.594556764146	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTGTCCGTGACATCA	-102670561	True	NA	-1	True	AATAAA	-16	NA	102671755	102637024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_102637634_102638713_102638835_102639122_102639200_102640203_102640415_102640611_102640774_102642629_102643194_102643423_102643870_102666076_102666164_102668914_102669005_102671551
transcript_182894.known	chr7	-	1598	9	FSM	ENSG00000168255.20	ENST00000379340.9	1598	9	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_6	571.380113737781	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTGTCCGTGACATCA	-102572371	True	NA	-19	True	AATAAA	-16	NA	102572539	102537918	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_102538526_102539605_102539727_102540014_102540092_102541092_102541304_102541500_102541663_102566996_102567084_102568009_102568185_102569834_102569925_102572471
transcript_182900.nnic	chr7	-	1716	9	NNC	ENSG00000267645.5	novel	1598	9	NA	NA	-114	24	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	217.11485295806	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTGTCCGTGACATCA	-102670561	True	NA	-1	True	AATAAA	-16	NA	102671755	102637024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_102637634_102638713_102638835_102639122_102639200_102640203_102640415_102640611_102640774_102665661_102665817_102666076_102666164_102668914_102669005_102671551
transcript_182901.known	chr7	-	1598	9	FSM	ENSG00000267645.5	ENST00000476151.5	1598	9	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_6	249.234797680821	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATAAATGCCCCCAAAA	-102670447	True	NA	-25	True	NA	NA	NA	102671641	102637048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_102637634_102638713_102638835_102639122_102639200_102640203_102640415_102640611_102640774_102666076_102666164_102667089_102667265_102668914_102669005_102671551
transcript_182904.known	chr7	-	1532	8	FSM	ENSG00000168255.20	ENST00000486319.5	1532	8	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_2	147.812622697019	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCTGTCCGTGACATC	-102572481	True	NA	-20	True	AATAAA	-15	NA	102572649	102537919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_102538526_102539605_102539727_102540014_102540092_102541092_102541304_102541500_102541663_102566996_102567084_102569834_102569925_102572471
transcript_182912.nnic	chr7	-	1304	7	NIC	ENSG00000267645.5	novel	1598	9	NA	NA	-19	24	combination_of_known_splicesites	FALSE	canonical	1	8	junction_4	190.63898400438	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTGTCCGTGACATCA	-102670466	True	NA	-1	True	AATAAA	-16	NA	102671660	102637024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_102637634_102638713_102638835_102639122_102639200_102640203_102640415_102666076_102666164_102668914_102669005_102671551
transcript_182919.known	chr7	-	348	4	FSM	ENSG00000285437.2	ENST00000621093.4	348	4	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	809.478158376672	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCAGTTTCCTGAGGCCT	-102572353	False	NA	NA	False	NA	NA	NA	102572521	102567050	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_102567084_102568009_102568185_102569834_102569925_102572471
transcript_182925.known	chr7	-	348	4	FSM	ENSG00000228049.7	ENST00000333432.8	348	4	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	382.23669223256	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCAGTTTCCTGAGGCCT	-102670407	False	NA	NA	False	NA	NA	NA	102671601	102666130	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_102666164_102667089_102667265_102668914_102669005_102671551
transcript_182926.known	chr7	-	4630	3	FSM	ENSG00000285437.2	ENST00000511313.5	4630	3	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_1	125.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAGAAAATTAGCTTTA	-102572415	True	NA	NA	False	AATAAA	-34	NA	102572583	102562655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_102567084_102569834_102569925_102572471
transcript_182929.known	chr7	-	932	3	FSM	ENSG00000285437.2	ENST00000443430.2	932	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	1008.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGCATGTGCTGTAG	-102572415	True	NA	NA	False	AATACA	-14	NA	102572583	102567483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_102568185_102569834_102569925_102572442
transcript_182930.known	chr7	-	2096	3	ISM	ENSG00000168255.20	ENST00000489144.5	2553	8	-13	28370	3	-22720	5prime_fragment	FALSE	canonical	3	653	junction_2	691.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAAAAAAGGTCC	-102572412	True	NA	NA	False	NA	NA	NA	102572580	102566287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_102568185_102569834_102569925_102572471
transcript_182938.nnic	chr7	-	2075	3	NIC	ENSG00000228049.7	novel	348	4	NA	NA	-44	1067	combination_of_known_splicesites	FALSE	canonical	3	324	junction_1	117.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCATGCTTTTCTGCATT	-102670479	True	NA	NA	False	AAAAAG	-10	NA	102671673	102664300	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_102666164_102668914_102669005_102671551
transcript_182939.known	chr7	-	2065	3	FSM	ENSG00000228049.7	ENST00000358438.6	2065	3	0	0	0	0	multi-exon	FALSE	canonical	3	559	junction_2	244	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAAAAAAAGTCC	-102670435	True	NA	NA	False	NA	NA	NA	102671629	102665367	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_102667265_102668914_102669005_102671551
transcript_182946.known	chr7	+	2211	8	FSM	ENSG00000222011.9	ENST00000413034.3	2211	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12.0526057814254	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTACTGATTCTTAATA	102748509	True	NA	15	True	AATAAA	-19	NA	102748998	102809225	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_102749659_102751691_102751802_102757853_102757947_102761272_102761412_102772408_102772451_102777252_102777349_102787334_102787470_102808289
transcript_182949.known	chr7	+	2217	8	FSM	ENSG00000222011.9	ENST00000442873.5	2217	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	9.45666809339164	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTACTGATTCTTAATA	102748481	True	NA	15	True	AATAAA	-19	NA	102748970	102809225	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_102749637_102751691_102751802_102757853_102757947_102761272_102761412_102772408_102772451_102777252_102777349_102787334_102787470_102808289
transcript_182951.known	chr7	+	1958	8	FSM	ENSG00000222011.9	ENST00000420217.1	1958	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	3.99489470117416	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGCTACTGATTCTTAAT	102748520	True	NA	14	True	AATAAA	-18	NA	102749009	102809224	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_102749418_102751691_102751802_102757853_102757947_102761272_102761412_102772408_102772451_102777252_102777349_102787334_102787470_102808289
transcript_182965.known	chr7	+	2116	4	FSM	ENSG00000128606.13	ENST00000339431.9	2116	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	2.49443825784929	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCCTGATACATCCAA	102912930	True	NA	20	True	AATAAA	-32	NA	102912999	102945111	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_102913146_102933773_102934686_102939429_102939586_102944209
transcript_182966.known	chr7	+	2002	5	FSM	ENSG00000128606.13	ENST00000249377.4	2002	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	3.60555127546399	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCTTTCGATAGCTGTT	102912935	True	NA	12	True	AATAAA	-25	NA	102913004	102944949	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_102913146_102933773_102934686_102939429_102939586_102942289_102942343_102944209
transcript_18297.known	chr1	-	5296	2	FSM	ENSG00000234678.2	ENST00000419190.2	5296	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTTATTTTTTTTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	202010463	201995695	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_202000328_202009799
transcript_182972.known	chr7	+	2371	7	FSM	ENSG00000170632.14	ENST00000323716.8	2371	7	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_2	176.295916004881	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTACAAGGTTATACATATT	103068507	True	NA	22	True	AATAAA	-15	NA	103075139	103099759	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_103075412_103075776_103075882_103083681_103083831_103086629_103086765_103092476_103092654_103097276_103097349_103098298
transcript_18298.known	chr1	+	2044	9	FSM	ENSG00000163435.16	ENST00000367283.7	2044	9	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	10.9594422759555	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTAGCTACCTGTGTAC	202010310	True	NA	9	True	AATAAA	-27	NA	202010586	202016009	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_202010821_202011128_202011300_202011956_202012179_202012343_202012437_202012639_202012760_202012946_202013037_202013181_202013299_202013828_202014025_202015208
transcript_182982.known	chr7	+	2445	6	FSM	ENSG00000170632.14	ENST00000428183.6	2445	6	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_4	194.715176604188	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCACTTACAAGGTTA	103074047	True	NA	14	True	AATAAA	-7	NA	103074880	103099751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_103075412_103075776_103075882_103083681_103083831_103086629_103086765_103097276_103097349_103098298
transcript_182985.known	chr7	+	2524	6	FSM	ENSG00000170632.14	ENST00000441711.6	2524	6	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_4	47.9391280688333	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTACAAGGTTATACATAT	103074047	True	NA	21	True	AATAAA	-14	NA	103074880	103099758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_103075412_103083681_103083831_103086629_103086765_103092476_103092654_103097276_103097349_103098298
transcript_18299.known	chr1	+	899	3	FSM	ENSG00000163435.16	ENST00000495848.1	899	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGCAGCATCACCTGTCC	202010317	True	NA	NA	False	NA	NA	NA	202010593	202012571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_202010707_202011128_202011300_202011956
transcript_182991.known	chr7	+	2347	5	FSM	ENSG00000170632.14	ENST00000454559.5	2347	5	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_3	164.921951237548	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTACAAGGTTATACATAT	103074047	True	NA	21	True	AATAAA	-14	NA	103074880	103099758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_103075412_103083681_103083831_103086629_103086765_103097276_103097349_103098298
transcript_182995.known	chr7	+	2266	4	FSM	ENSG00000170632.14	ENST00000541300.5	2266	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	239.634443823643	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAATCACTTACAAGGT	103074047	True	NA	12	True	AATAAA	-5	NA	103074880	103099749	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_103075412_103083681_103083831_103086629_103086765_103098298
transcript_18300.known	chr1	-	1789	7	FSM	ENSG00000143862.8	ENST00000272217.7	1789	7	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_2	60.2035897785358	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGTGTATGGTGCTGGTT	-202138779	True	NA	-3	True	AATAAA	-20	NA	202144737	202133403	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_202134517_202135149_202135221_202135458_202135527_202135706_202135801_202137964_202138039_202138367_202138449_202144449
transcript_183002.known	chr7	-	4972	6	FSM	ENSG00000161048.12	ENST00000341533.8	4972	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	3.48711915483254	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATAACCTTGTAAGTGAT	-103149211	False	NA	-3	True	AATAAA	-22	NA	103149232	103099775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_103103123_103103423_103103555_103115059_103115175_103119576_103120224_103128482_103128793_103148810
transcript_183004.known	chr7	-	5140	5	FSM	ENSG00000161048.12	ENST00000465647.6	5140	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	1.78535710713571	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATAACCTTGTAAGTGAT	-103149078	False	NA	-3	True	AATAAA	-22	NA	103149099	103099775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_103103555_103115059_103115175_103119576_103120224_103128482_103128793_103148810
transcript_183006.known	chr7	-	1822	5	FSM	ENSG00000161048.12	ENST00000427257.5	1822	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	3.89711431702997	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTTTTTTCCATTCTT	NA	False	NA	NA	False	NA	NA	NA	103149560	103103086	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_103103555_103115059_103115175_103119576_103120224_103128482_103128793_103149278
transcript_183007.nic	chr7	-	2315	2	ISM	ENSG00000161048.12	ENST00000427257.5	1822	5	-14	23687	-14	16	5prime_fragment	FALSE	canonical	3	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCCAGGTGCAATAGAGT	NA	False	NA	NA	False	AATACA	-6	NA	103149574	103126773	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_103128793_103149278
transcript_183009.known	chr7	-	2169	2	FSM	ENSG00000161048.12	ENST00000479761.1	2169	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATACAAAAAATTAG	-103148955	False	NA	NA	False	NA	NA	NA	103148976	103126789	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_103128793_103148810
transcript_18301.known	chr1	-	1727	6	FSM	ENSG00000143862.8	ENST00000614750.1	1727	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	208.141682514579	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGTGTATGGTGCTGGTT	-202138785	True	NA	-3	True	AATAAA	-20	NA	202144743	202133403	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_202134517_202135149_202135221_202135706_202135801_202137964_202138039_202138367_202138449_202144449
transcript_183010.known	chr7	-	3006	3	FSM	ENSG00000170629.15	ENST00000446373.2	3040	3	34	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGAGTCTGGACTTTGG	-103280265	True	NA	NA	False	AATAAA	-12	NA	103280277	103273091	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_103275628_103277613_103277639_103279832
transcript_183013.known	chr7	-	2291	17	FSM	ENSG00000105821.15	ENST00000379263.8	2291	17	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_11	41.4366987102013	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGATTAGGAGCATTTTA	-103337919	True	NA	-25	True	TATAAA	-18	NA	103344767	103312288	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_103312644_103312946_103313102_103315763_103315872_103315987_103316089_103316829_103317015_103319608_103319679_103319755_103319845_103321931_103322082_103322510_103322633_103322702_103322795_103323597_103323664_103324481_103324563_103326542_103326685_103327655_103327755_103337735_103337812_103341763_103341955_103344558
transcript_183017.known	chr7	+	3910	13	FSM	ENSG00000105819.14	ENST00000249269.9	3910	13	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_1	45.2603579305334	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAAACAAGTCACTGCTGA	103289837	True	NA	NA	False	ATTAAA	-25	NA	103297434	103314686	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_103297559_103298567_103298709_103299442_103299530_103300177_103300308_103303841_103304041_103304410_103304491_103307595_103307709_103308951_103309096_103310314_103310476_103311642_103311729_103311807_103311897_103312055_103312132_103312206
transcript_18302.known	chr1	+	6529	2	FSM	ENSG00000170075.10	ENST00000367282.6	6529	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCCATGCTGAGTTCTCT	202122899	True	NA	NA	False	AATAAA	-23	NA	202122916	202133592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_202123594_202127740
transcript_183025.known	chr7	+	1714	12	FSM	ENSG00000105819.14	ENST00000428154.5	1714	12	0	0	0	0	multi-exon	TRUE	canonical	3	651	junction_1	45.7331461978839	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTTTTGTATTAATGGT	103289837	True	NA	25	True	ATTAAA	-45	NA	103297434	103312415	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_103297559_103298567_103298709_103299442_103299530_103300177_103300308_103303841_103304041_103304410_103304491_103307595_103307709_103308951_103309096_103310314_103310476_103311642_103311729_103311807_103311897_103312055
transcript_183040.nic	chr7	-	1154	10	ISM	ENSG00000105821.15	ENST00000249270.11	1846	15	-132	9563	0	563	5prime_fragment	FALSE	canonical	3	267	junction_4	34.1991264057078	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGGAGGAAGTCAGACA	-103337950	True	NA	NA	False	NA	NA	NA	103344798	103322036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_103322082_103322510_103322633_103322702_103322795_103323597_103323664_103324481_103324563_103326542_103326685_103327655_103327755_103337735_103337812_103341763_103341955_103344558
transcript_183046.known	chr7	+	2479	9	FSM	ENSG00000161057.13	ENST00000679250.1	2479	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	321.681495232474	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTACACATTTAGAACACA	103338982	True	NA	-11	True	ATTAAA	-4	NA	103347635	103369375	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_103347782_103361956_103362089_103362685_103362759_103363343_103363440_103364142_103364308_103366075_103366164_103367412_103367616_103367712_103367810_103367896
transcript_183048.nic	chr7	-	1184	9	ISM	ENSG00000105821.15	ENST00000249270.11	1846	15	-207	10037	-43	89	5prime_fragment	FALSE	canonical	3	267	junction_3	36.1902524859941	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGACAACATTTAATGAA	-103344854	False	NA	NA	False	AAGAAA	-3	NA	103344873	103322510	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_103322633_103322702_103322795_103323597_103323664_103324481_103324563_103326542_103326685_103327655_103327755_103337735_103337812_103341763_103341955_103344558
transcript_183049.nic	chr7	-	1095	9	ISM	ENSG00000105821.15	ENST00000249270.11	1846	15	-207	10126	-43	0	5prime_fragment	FALSE	canonical	3	267	junction_3	36.1902524859941	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGTTCAAGGAAGAAGAAAAA	-103344854	False	NA	NA	False	GATAAA	-3	NA	103344873	103322599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_103322633_103322702_103322795_103323597_103323664_103324481_103324563_103326542_103326685_103327655_103327755_103337735_103337812_103341763_103341955_103344558
transcript_183053.known	chr7	-	854	8	FSM	ENSG00000105821.15	ENST00000454277.5	854	8	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_7	119.369602666744	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAACAGAATAAGAACATTA	-103337930	True	NA	NA	False	AAAAAG	-7	NA	103344778	103322726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_103322795_103323597_103323664_103324481_103324563_103326542_103326685_103327655_103327755_103337735_103337812_103341763_103341866_103344558
transcript_183054.nic	chr7	-	1038	8	ISM	ENSG00000105821.15	ENST00000249270.11	1846	15	-207	10253	-43	0	5prime_fragment	FALSE	canonical	3	267	junction_2	33.7922826596094	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAACAGAATAAGAACATTA	-103344854	False	NA	NA	False	AAAAAG	-7	NA	103344873	103322726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_103322795_103323597_103323664_103324481_103324563_103326542_103326685_103327655_103327755_103337735_103337812_103341763_103341955_103344558
transcript_183056.known	chr7	-	942	8	FSM	ENSG00000105821.15	ENST00000379257.7	942	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	147.543144848674	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGTATGCAAATCATTAA	-103337950	True	NA	27	True	AAAAAG	-14	NA	103344798	103323597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_103323664_103324481_103324563_103326542_103326685_103327331_103327379_103327655_103327755_103337735_103337812_103341763_103341955_103344558
transcript_183059.nic	chr7	-	970	7	ISM	ENSG00000105821.15	ENST00000249270.11	1846	15	-207	11124	-43	0	5prime_fragment	FALSE	canonical	3	267	junction_1	36.2169389466679	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGTATGCAAATCATTAA	-103344854	False	NA	27	True	AAAAAG	-14	NA	103344873	103323597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_103323664_103324481_103324563_103326542_103326685_103327655_103327755_103337735_103337812_103341763_103341955_103344558
transcript_183066.known	chr7	+	1509	13	FSM	ENSG00000105819.14	ENST00000453466.1	1509	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	197.799140544139	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAGAGCTAGAGAAAAATA	103289859	True	NA	47	True	ATTAAA	-41	NA	103297456	103312312	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_103297559_103298567_103298709_103299442_103299534_103300186_103300308_103303841_103304041_103304410_103304491_103307595_103307709_103308951_103309096_103310314_103310476_103311642_103311729_103311807_103311897_103312055_103312132_103312206
transcript_183070.known	chr7	-	1924	14	FSM	ENSG00000164815.11	ENST00000297431.9	1924	14	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_4	18.1567794240403	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTGTATTTATCTTT	-104205186	True	NA	-1	True	AATAAA	-24	NA	104208013	104126340	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_104126894_104136780_104136894_104161071_104161183_104165234_104165283_104166771_104166885_104168472_104168526_104183942_104184034_104184122_104184172_104188250_104188382_104195142_104195255_104197724_104197800_104200757_104200959_104204141_104204235_104207832
transcript_183077.known	chr7	-	1409	9	FSM	ENSG00000164815.11	ENST00000447452.6	1409	9	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_7	13.3878442999611	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAGCAAATATTGAAAAAAA	-104205130	True	NA	NA	False	ATTAAA	-25	NA	104207957	104167993	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_104168526_104183942_104184034_104184122_104184172_104188250_104188382_104195142_104195255_104197724_104197800_104200757_104200959_104204141_104204235_104207832
transcript_183079.known	chr7	-	1214	7	FSM	ENSG00000164815.11	ENST00000485726.1	1214	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	84.1732670679289	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAATATATCTGAGGCTGG	-104205182	True	NA	NA	False	NA	NA	NA	104208009	104187542	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_104187968_104188250_104188382_104195142_104195255_104197724_104197800_104200757_104200959_104204141_104204235_104207832
transcript_183085.known	chr7	+	2523	15	FSM	ENSG00000005483.22	ENST00000476671.5	2523	15	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	24.022948212414	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTTCAGAATGTCTTTT	105010007	True	NA	NA	False	AATAAA	-16	NA	105014217	105091609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_105014536_105038125_105038200_105040838_105041024_105062163_105062279_105063350_105063581_105066726_105066808_105073618_105073678_105074642_105074816_105076042_105076082_105076962_105077194_105077302_105077434_105078845_105078964_105081687_105081798_105090008_105090274_105091215
transcript_183088.nic	chr7	+	3025	14	ISM	ENSG00000005483.22	ENST00000476671.5	2523	15	-1037	1477	-983	0	5prime_fragment	FALSE	canonical	3	22	junction_1	24.3500118464669	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAAAGATATTTCAAAAGA	105013150	False	NA	-2	True	AAAAAG	-9	NA	105013180	105090132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_105014536_105038125_105038200_105040838_105041024_105062163_105062279_105063350_105063581_105066726_105066808_105073618_105073678_105074642_105074816_105076042_105076082_105076962_105077194_105077302_105077434_105078845_105078964_105081687_105081798_105090008
transcript_183089.nic	chr7	+	2197	14	NIC	ENSG00000005483.22	novel	2523	15	NA	NA	-3	-309	combination_of_known_junctions	FALSE	canonical	3	55	junction_2	15.6371579917571	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAGGAAGATGGTAAGT	105009950	True	NA	13	True	AATGAA	-35	NA	105014160	105091300	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_105014536_105040838_105041024_105062163_105062279_105063350_105063581_105066726_105066808_105073618_105073678_105074642_105074816_105076042_105076082_105076962_105077194_105077302_105077434_105078845_105078964_105081687_105081798_105090008_105090274_105091215
transcript_183091.nic	chr7	+	1971	13	NIC	ENSG00000005483.22	novel	1745	14	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_2	15.8499912372917	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAAAGATATTTCAAAAGA	105009950	True	NA	-2	True	AAAAAG	-9	NA	105014160	105090132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_105014536_105040838_105041024_105062163_105062279_105063350_105063581_105066726_105066808_105073618_105073678_105074642_105074816_105076042_105076082_105076962_105077194_105077302_105077434_105078845_105078964_105081687_105081798_105090008
transcript_183092.nic	chr7	+	2047	13	NIC	ENSG00000005483.22	novel	1745	14	NA	NA	-3	76	combination_of_known_junctions	FALSE	canonical	3	55	junction_2	15.8499912372917	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGAGCCCAGAAACTAAA	105009950	True	NA	74	True	NA	NA	NA	105014160	105090208	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_105014536_105040838_105041024_105062163_105062279_105063350_105063581_105066726_105066808_105073618_105073678_105074642_105074816_105076042_105076082_105076962_105077194_105077302_105077434_105078845_105078964_105081687_105081798_105090008
transcript_183096.nic	chr7	+	1224	8	ISM	ENSG00000005483.22	ENST00000476671.5	2523	15	-27	16832	1	0	5prime_fragment	FALSE	canonical	3	22	junction_1	23.9395497204172	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCGGGGAGAAAGAACAACAC	105009980	True	NA	NA	False	GATAAA	-14	NA	105014190	105074777	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_105014536_105038125_105038200_105040838_105041024_105062163_105062279_105063350_105063581_105066726_105066808_105073618_105073678_105074642
transcript_183098.known	chr7	+	1133	7	FSM	ENSG00000005483.22	ENST00000495267.5	1133	7	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	12.4152683776425	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCGGGGAGAAAGAACAACAC	105009997	True	NA	NA	False	GATAAA	-14	NA	105014207	105074777	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_105014536_105040838_105041024_105062163_105062279_105063350_105063581_105066726_105066808_105073618_105073678_105074642
transcript_1831.nic	chr1	-	3496	2	ISM	ENSG00000116198.14	ENST00000676046.1	1661	4	-18	2690	-4	-2690	5prime_fragment	FALSE	canonical	3	106	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATGTCACTTTTGAGCAA	-3853987	True	NA	NA	False	NA	NA	NA	3857229	3849266	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_3852422_3856888
transcript_18310.known	chr1	+	3649	18	FSM	ENSG00000133067.18	ENST00000367278.8	3649	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.43674296202447	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAATCTATTGAACTTTG	202193746	False	NA	NA	False	AATAAA	-19	NA	202193798	202319761	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_202194202_202225422_202225495_202227935_202228008_202235921_202235994_202276305_202276522_202280780_202280853_202297507_202297577_202300848_202300921_202301163_202301236_202303278_202303348_202304558_202304631_202305683_202305750_202306867_202306940_202307329_202307402_202309050_202309177_202310196_202310358_202314801_202314883_202317951
transcript_183101.nic	chr7	+	650	3	ISM	ENSG00000005483.22	ENST00000476671.5	2523	15	-30	50543	-2	210	5prime_fragment	FALSE	canonical	3	22	junction_1	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTCTGGAGCTAGAAAGT	105009977	True	NA	NA	False	TTTAAA	-31	NA	105014187	105041066	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_105014536_105038125_105038200_105040838
transcript_183103.nnic	chr7	+	1565	2	ISM	ENSG00000005483.22	ENST00000495267.5	1133	7	-1009	33711	-965	210	5prime_fragment	FALSE	canonical	3	57	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTCTGGAGCTAGAAAGT	105013104	True	NA	NA	False	TTTAAA	-31	NA	105013198	105041066	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_105014536_105040838
transcript_183107.known	chr7	-	3679	16	FSM	ENSG00000135250.17	ENST00000393651.8	3679	16	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_14	35.0551311824991	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCCTTGGTCATTGCCC	-105384372	True	NA	-1	True	ATTAAA	-26	NA	105388921	105116373	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_105118023_105126247_105126341_105126992_105127063_105132790_105132899_105133003_105133105_105142007_105142491_105143083_105143331_105145282_105145309_105146492_105146659_105160506_105160614_105167376_105167465_105168007_105168096_105169156_105169266_105203627_105203786_105388647_105388703_105388790
transcript_18311.known	chr1	-	824	7	FSM	ENSG00000077152.11	ENST00000643045.1	824	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	485.39502813001	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGTAGTTTATTTAT	-202327484	True	NA	-14	True	AATATA	-14	NA	202341959	202331737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_202331961_202333009_202333094_202333236_202333336_202333449_202333556_202334988_202335059_202335641_202335819_202341894
transcript_183112.nic	chr7	-	1178	11	NIC	ENSG00000135250.17	novel	3679	16	NA	NA	-52	17104	combination_of_known_junctions	FALSE	canonical	2	9	junction_9	109.583757920597	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCACCTCAGCTGCACCTT	-105388962	False	NA	NA	False	AATAGA	-7	NA	105388973	105143196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_105143331_105145282_105145309_105146492_105146659_105160506_105160614_105167376_105167465_105168007_105168096_105169156_105169266_105203627_105203786_105268805_105268870_105388647_105388703_105388790
transcript_183116.nic	chr7	-	1114	10	ISM	ENSG00000135250.17	ENST00000393651.8	3679	16	-52	26823	-52	17104	5prime_fragment	FALSE	canonical	3	203	junction_8	37.016512831738	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCACCTCAGCTGCACCTT	-105388962	False	NA	NA	False	AATAGA	-7	NA	105388973	105143196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_105143331_105145282_105145309_105146492_105146659_105160506_105160614_105167376_105167465_105168007_105168096_105169156_105169266_105203627_105203786_105388647_105388703_105388790
transcript_183119.nic	chr7	-	1025	10	ISM	ENSG00000135250.17	ENST00000393651.8	3679	16	-52	26912	-52	17015	5prime_fragment	FALSE	canonical	3	203	junction_8	37.016512831738	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGAGGCAGGCTGAGTT	-105388962	False	NA	NA	False	AAAAAG	-19	NA	105388973	105143285	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_105143331_105145282_105145309_105146492_105146659_105160506_105160614_105167376_105167465_105168007_105168096_105169156_105169266_105203627_105203786_105388647_105388703_105388790
transcript_183122.nic	chr7	-	980	9	ISM	ENSG00000135250.17	ENST00000393651.8	3679	16	-52	28909	-52	15018	5prime_fragment	FALSE	canonical	3	203	junction_7	37.8318648760539	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTACTTACGCATATTA	-105388962	False	NA	NA	False	NA	NA	NA	105388973	105145282	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_105145309_105146492_105146659_105160506_105160614_105167376_105167465_105168007_105168096_105169156_105169266_105203627_105203786_105388647_105388703_105388790
transcript_183124.nic	chr7	-	1018	9	NIC	ENSG00000135250.17	novel	3679	16	NA	NA	-52	13808	combination_of_known_junctions	FALSE	canonical	2	9	junction_7	121.938252816743	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGGAGCTGAGCCAGCT	-105388962	False	NA	NA	False	NA	NA	NA	105388973	105146492	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_105146659_105160506_105160614_105167376_105167465_105168007_105168096_105169156_105169266_105203627_105203786_105268805_105268870_105388647_105388703_105388790
transcript_183125.nic	chr7	-	954	8	ISM	ENSG00000135250.17	ENST00000393651.8	3679	16	-52	30119	-52	13808	5prime_fragment	FALSE	canonical	3	203	junction_6	39.3134966698227	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGGAGCTGAGCCAGCT	-105388962	False	NA	NA	False	NA	NA	NA	105388973	105146492	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_105146659_105160506_105160614_105167376_105167465_105168007_105168096_105169156_105169266_105203627_105203786_105388647_105388703_105388790
transcript_183131.known	chr7	-	3480	16	FSM	ENSG00000091127.14	ENST00000356362.6	3480	16	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_15	77.5217818852654	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTGCAGATAAGAATCTT	-105515634	True	NA	-11	True	AATAAA	-20	NA	105522258	105456510	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_105457927_105459167_105459260_105462620_105462751_105465312_105465415_105468336_105468464_105470687_105470849_105472131_105472194_105481051_105481178_105482311_105482441_105491539_105491618_105495141_105495254_105502419_105502565_105505954_105506057_105506188_105506274_105508114_105508521_105522051
transcript_183132.known	chr7	-	3525	16	FSM	ENSG00000091127.14	ENST00000469408.6	3525	16	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_11	32.3639030746018	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAGAATCTTGACCTTGA	-105515647	True	NA	-3	True	AATAAA	-28	NA	105522271	105456502	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_105457927_105459167_105459260_105462620_105462751_105465312_105465415_105468336_105468464_105470687_105470849_105472131_105472194_105481051_105481178_105482311_105482441_105491539_105491618_105495141_105495254_105502419_105502565_105505954_105506057_105506188_105506274_105508114_105508545_105522051
transcript_18315.known	chr1	-	1065	6	FSM	ENSG00000077152.11	ENST00000487227.6	1065	6	0	0	0	0	multi-exon	FALSE	canonical	3	1013	junction_5	128.543533481852	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGTTTATCCTGAATG	-202327505	True	NA	-16	True	AATAAA	-18	NA	202341980	202331656	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_202331961_202333009_202333336_202333449_202333556_202334988_202335059_202335645_202335819_202341894
transcript_183165.nic	chr7	-	1601	10	ISM	ENSG00000091127.14	ENST00000469408.6	3525	16	-24	15541	-24	-1758	5prime_fragment	FALSE	canonical	3	347	junction_5	34.8906581292379	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACGTTGTTGTTTCAGTAT	-105522266	False	NA	-3	True	AATAAA	-16	NA	105522295	105472043	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_105472194_105481051_105481178_105482311_105482441_105491539_105491618_105495141_105495254_105502419_105502565_105505954_105506057_105506188_105506274_105508114_105508545_105522051
transcript_18317.known	chr1	+	15431	25	FSM	ENSG00000077157.22	ENST00000391959.5	15431	25	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_12	6.33059151176957	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTCCCCTTCTCAATAT	202347149	True	NA	8	True	AATAAA	-24	NA	202348698	202592706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_202349143_202416786_202416918_202422619_202422739_202425565_202425726_202427039_202427185_202428854_202428930_202430730_202430811_202431479_202431620_202434655_202434769_202437820_202438025_202440705_202440789_202442446_202442573_202445045_202445229_202448988_202449172_202488532_202488624_202493113_202493318_202495292_202495483_202495569_202495683_202496780_202496823_202558876_202558894_202562777_202562923_202564442_202564548_202567777_202567832_202569146_202569198_202580473
transcript_183170.nic	chr7	-	886	5	ISM	ENSG00000091127.14	ENST00000469408.6	3525	16	-24	46037	-24	-10954	5prime_fragment	FALSE	canonical	3	359	junction_4	28.3229147511339	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCATCATCCATCAGGCT	-105522266	False	NA	NA	False	NA	NA	NA	105522295	105502539	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_105502565_105505954_105506057_105506188_105506274_105508114_105508545_105522051
transcript_18318.known	chr1	+	15244	24	FSM	ENSG00000077157.22	ENST00000608999.6	15244	24	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_16	5.49239033634767	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACAGTGTCCCCTTCTCA	202347149	True	NA	4	True	AATAAA	-20	NA	202348698	202592702	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_202349143_202416786_202416918_202422619_202422739_202425565_202425726_202427039_202427185_202428854_202428930_202430730_202430811_202431479_202431620_202434655_202434769_202437820_202438025_202440705_202440789_202442446_202442573_202448988_202449172_202488532_202488624_202493113_202493318_202495292_202495483_202495569_202495683_202496780_202496823_202558876_202558894_202562777_202562923_202564442_202564548_202567777_202567832_202569146_202569198_202580473
transcript_183181.nic	chr7	+	2744	15	NIC	ENSG00000135249.8	novel	2627	15	NA	NA	-2	0	combination_of_known_junctions	TRUE	canonical	1	10	junction_3	53.4988079211078	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTGAATGCATATTTGTA	105528883	True	NA	14	True	AATAAA	-15	NA	105532178	105567676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_105532358_105532823_105532870_105536564_105536613_105542407_105542650_105546909_105547084_105547183_105547334_105548553_105548711_105550054_105550166_105550260_105550487_105551569_105551708_105555027_105555228_105563732_105563948_105565276_105565458_105565529_105565649_105567118
transcript_183182.known	chr7	+	2627	15	FSM	ENSG00000135249.8	ENST00000497979.5	2627	15	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	54.1854807723491	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTGAATGCATATTTGTA	105528916	True	NA	14	True	AATAAA	-15	NA	105532211	105567676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_105532358_105532823_105532870_105536564_105536613_105542491_105542650_105546909_105547084_105547183_105547334_105548553_105548711_105550054_105550166_105550260_105550487_105551569_105551708_105555027_105555228_105563732_105563948_105565276_105565458_105565529_105565649_105567118
transcript_183183.known	chr7	+	2860	15	FSM	ENSG00000135249.8	ENST00000257700.7	2860	15	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_5	26.3009466734254	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGAATGCATATTTGTAA	105528905	True	NA	15	True	AATAAA	-16	NA	105532200	105567677	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_105532358_105532823_105532870_105536564_105536750_105542407_105542650_105546909_105547084_105547183_105547334_105548553_105548711_105550054_105550166_105550260_105550487_105551569_105551708_105555027_105555228_105563732_105563948_105565276_105565458_105565529_105565649_105567118
transcript_183198.known	chr7	-	1550	4	FSM	ENSG00000185055.11	ENST00000486180.5	1550	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	2.82842712474619	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATGTCAAATGTTTAAGG	-105581197	True	NA	NA	False	NA	NA	NA	105581486	105566322	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_105567491_105569202_105569291_105569406_105569572_105581357
transcript_183199.known	chr7	-	5707	12	FSM	ENSG00000146776.15	ENST00000419735.8	5707	12	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	44.9127712882805	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTGCACCTGCTCATTT	-105875714	True	NA	-1	True	ATTAAA	-22	NA	105876599	105604771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_105607891_105610528_105610604_105613861_105614817_105620199_105620322_105624074_105624268_105638352_105638610_105639486_105639570_105642837_105643122_105665065_105665289_105788603_105788709_105875811_105875881_105876377
transcript_1832.known	chr1	-	1661	4	FSM	ENSG00000116198.14	ENST00000676046.1	1661	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	7.71722460186015	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGGAGTTTTGTTTTTT	-3853969	True	NA	NA	False	TTTAAA	-2	NA	3857211	3846576	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3847614_3848607_3848782_3852294_3852422_3856888
transcript_183211.known	chr7	-	1470	4	FSM	ENSG00000146776.15	ENST00000318724.8	1470	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	18.3726850393609	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTTTCCTCATATATAA	-105875697	True	NA	NA	False	AATAAA	-18	NA	105876582	105760372	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_105761464_105788603_105788709_105875811_105875881_105876377
transcript_183215.known	chr7	-	410	3	FSM	ENSG00000146776.15	ENST00000464874.1	410	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	28	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCTGCCGTATGTAACT	-105875689	True	NA	-1	True	AATAAA	-21	NA	105876574	105875090	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_105875235_105875811_105875881_105876377
transcript_183241.nnic	chr7	+	1242	5	NNC	ENSG00000128536.16	novel	993	4	NA	NA	-9	-2579	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	21	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGAATGCCTGATTCTG	105875302	True	NA	NA	False	AGTAAA	-15	NA	105876786	105921604	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_105877258_105911016_105911242_105912482_105912639_105919534_105919608_105921287
transcript_183259.nic	chr7	+	1327	2	ISM	ENSG00000128536.16	ENST00000470188.5	2199	15	-33	120592	-8	1275	5prime_fragment	FALSE	canonical	3	60	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTGTTGTTTTAACTCC	105875303	True	NA	NA	False	AATAAA	-17	NA	105876787	105911873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_105877258_105911016
transcript_183260.known	chr7	+	1603	4	FSM	ENSG00000128536.16	ENST00000474330.1	1603	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	11.7851130197758	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAAAATACCCCTTTAT	105875333	True	NA	NA	False	AATGAA	-22	NA	105876817	105890103	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_105877258_105878206_105878359_105879644_105880078_105889525
transcript_183262.known	chr7	-	835	6	FSM	ENSG00000008282.9	ENST00000634737.1	835	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	262.065945899119	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTAAGATGTAAATGTATT	-106112129	False	NA	45	True	CATAAA	-20	NA	106112142	106091639	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_106091940_106092948_106093138_106096292_106096303_106097689_106097898_106099157_106099283_106112139
transcript_183263.known	chr7	-	2130	5	FSM	ENSG00000008282.9	ENST00000455385.7	2130	5	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_2	22.4763764873255	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGCACTGATTGTTAATA	-106105171	True	NA	NA	False	AATAAA	-15	NA	106112312	106090504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_106091940_106092948_106093138_106097689_106097898_106099157_106099283_106112139
transcript_183266.known	chr7	-	2127	6	FSM	ENSG00000008282.9	ENST00000011473.6	2127	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	210.661434534183	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGCACTGATTGTTAATA	NA	False	NA	NA	False	AATAAA	-15	NA	106112576	106090504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_106091940_106092948_106093138_106097689_106097898_106099157_106099283_106112139_106112212_106112478
transcript_183268.known	chr7	-	2265	11	FSM	ENSG00000105835.13	ENST00000681936.1	2265	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	203.016255506794	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGAATGTCTAGGCACT	-106284507	False	5000	NA	False	ATTAAA	-16	NA	106284544	106250430	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_106251194_106253016_106253152_106254363_106254505_106261587_106261708_106263391_106263618_106268463_106268601_106269153_106269313_106272529_106272656_106274945_106275050_106277022_106277180_106284347
transcript_183269.known	chr7	-	2598	11	FSM	ENSG00000105835.13	ENST00000681878.1	2598	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	169.118567874731	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCATTTATTAATTTTAAA	-106284934	False	NA	-17	True	ATTAAA	-22	NA	106284971	106250038	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_106251194_106253016_106253152_106254363_106254505_106261587_106261708_106263391_106263618_106268463_106268601_106269153_106269313_106272529_106272659_106274945_106275041_106277022_106277180_106284827
transcript_18327.known	chr1	+	1808	10	FSM	ENSG00000077157.22	ENST00000480184.5	1808	10	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_8	4.80740170061865	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTCCTTTTGGTTTGTT	202347170	True	NA	NA	False	AATAAA	-16	NA	202348719	202438242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_202349143_202416786_202416918_202422619_202422739_202425565_202425726_202427039_202427185_202428854_202428930_202430730_202430811_202431479_202431620_202434655_202434769_202437820
transcript_183277.known	chr7	-	1495	8	FSM	ENSG00000105835.13	ENST00000354289.9	1495	8	0	0	0	0	multi-exon	FALSE	canonical	3	494	junction_3	44.3911188028802	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGTGTTTATGTTGGTA	-106285155	False	NA	NA	False	TATAAA	-17	NA	106285192	106261489	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_106261708_106263391_106263618_106268463_106268601_106269153_106269313_106272529_106272659_106274945_106275050_106277022_106277180_106284827
transcript_183280.known	chr7	-	1984	11	FSM	ENSG00000105835.13	ENST00000680786.1	1984	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	202.228979130094	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTATGTTTATATTTAA	-106284518	False	5000	NA	False	CATAAA	-27	NA	106284555	106250744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_106251194_106253016_106253152_106254363_106254505_106261587_106261708_106263391_106263618_106268463_106268601_106269153_106269313_106272529_106272659_106274945_106275069_106277022_106277180_106284347
transcript_183281.known	chr7	-	3715	4	FSM	ENSG00000105835.13	ENST00000393618.6	3715	4	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_3	194.295879752734	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCAGGACATACCTCCAA	-106284520	False	5000	NA	False	NA	NA	NA	106284557	106269414	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_106272659_106274945_106275050_106277022_106277180_106284347
transcript_183282.known	chr7	+	3689	11	FSM	ENSG00000005249.13	ENST00000265717.5	3689	11	0	0	0	0	multi-exon	TRUE	canonical	3	225	junction_5	21.679714020254	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGGATGTCATTATTTA	107041536	True	NA	11	True	ATTAAA	-16	NA	107044704	107161811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_107045215_107070280_107070317_107121951_107122005_107128211_107128296_107140846_107140954_107146307_107146462_107150921_107151024_107153176_107153252_107156983_107157050_107157185_107157325_107159448
transcript_183286.nic	chr7	+	987	7	ISM	ENSG00000005249.13	ENST00000265717.5	3689	11	12	10835	12	4514	5prime_fragment	FALSE	canonical	3	225	junction_5	27.3109664583458	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATGAAAGCTTTATTGAG	107041548	True	NA	NA	False	AAAAAG	-8	NA	107044716	107150976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_107045215_107070280_107070317_107121951_107122005_107128211_107128296_107140846_107140954_107146307_107146462_107150921
transcript_183287.known	chr7	-	4658	22	FSM	ENSG00000164597.15	ENST00000297135.9	4658	22	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_15	17.3386961876471	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATAGTAATCCTATATAT	-107561521	True	NA	-20	True	AATAAA	-30	NA	107563920	107201371	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_107203631_107210525_107210606_107211098_107211226_107230614_107230692_107236449_107236688_107248395_107248500_107256731_107256795_107258272_107258384_107281299_107281400_107283570_107283733_107298141_107298347_107324439_107324522_107362032_107362111_107362307_107362421_107372594_107372761_107412501_107412633_107527236_107527358_107548110_107548181_107548277_107548333_107554284_107554343_107557975_107558116_107563802
transcript_183299.known	chr7	-	576	6	FSM	ENSG00000164597.15	ENST00000605888.1	576	6	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_2	12.9553077925613	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTTTTTTTTTTTTTT	-107561535	True	NA	NA	False	AATGAA	-5	NA	107563934	107527236	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_107527358_107548110_107548181_107548277_107548333_107554284_107554343_107557975_107558116_107563802
transcript_1833.known	chr1	-	3152	21	FSM	ENSG00000116198.14	ENST00000428079.6	3152	21	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_14	10.9429200856079	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCATGTTCTGGTTCCTT	-3853991	True	NA	NA	False	AATAAA	-14	NA	3857233	3816148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3816371_3823173_3823242_3823423_3823563_3825757_3825867_3826369_3826437_3826707_3826745_3829265_3829374_3829790_3829998_3831045_3831223_3833861_3834036_3834924_3835093_3836494_3836693_3837291_3837520_3838963_3839120_3839607_3839777_3844906_3844984_3845288_3845352_3847474_3847614_3848607_3848782_3852294_3852422_3856888
transcript_18330.known	chr1	-	7635	9	FSM	ENSG00000143858.12	ENST00000367268.5	7635	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	9.61769203083567	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGGGTGGGGGGTGTCT	-202709352	True	NA	NA	False	ATTAAA	-19	NA	202710454	202590595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_202596964_202599217_202599352_202600356_202600475_202601889_202602058_202602377_202602546_202602998_202603119_202604454_202604622_202605594_202605790_202710257
transcript_183302.known	chr7	+	2704	11	FSM	ENSG00000105856.14	ENST00000468410.5	2704	11	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	32.9842386603056	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGTTGCTTATCTCTG	107165508	True	NA	14	True	AATAAA	-6	NA	107168960	107202508	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_107169028_107179878_107180063_107182372_107182602_107185800_107185943_107186360_107186473_107186568_107186682_107189291_107189449_107190172_107190318_107195833_107196152_107200159_107200302_107201413
transcript_183305.known	chr7	+	2834	11	FSM	ENSG00000105856.14	ENST00000222574.9	2834	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	48.7677147301368	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGACGTCTACTGATTG	107165550	True	NA	28	True	AATAAA	-20	NA	107169002	107202522	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_107169186_107179878_107180063_107182372_107182602_107185800_107185943_107186360_107186473_107186568_107186682_107189291_107189449_107190172_107190318_107195833_107196152_107200159_107200302_107201413
transcript_183316.known	chr7	+	2332	8	FSM	ENSG00000105856.14	ENST00000498408.1	2332	8	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_4	18.9014630683037	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTGCCTGTACCCTTA	107179906	True	NA	8	True	AATAAA	-22	NA	107179917	107197122	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_107180063_107182372_107182602_107185800_107185943_107186360_107186473_107186568_107186682_107189291_107189449_107190172_107190318_107195833
transcript_183317.known	chr7	+	6749	14	FSM	ENSG00000288558.2	ENST00000673780.1	6749	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	64.9323726484061	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCATGCTCAACTTTTTA	107562706	True	NA	8	True	ATTAAA	-20	NA	107563970	107623317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_107564210_107564587_107564677_107567049_107567187_107571144_107571267_107573703_107573822_107575187_107575311_107576365_107576593_107580758_107580865_107583881_107583983_107593954_107594106_107595866_107596003_107600396_107600506_107613331_107613433_107618327
transcript_183318.known	chr7	+	2266	8	FSM	ENSG00000105865.11	ENST00000265720.8	2266	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	14.549002350256	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTGGTGCCATCTTTT	107562706	True	NA	113	True	AATGAA	-16	NA	107563970	107578523	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_107564210_107564587_107564677_107567049_107567187_107571144_107571267_107573703_107573822_107575187_107575311_107576365_107576593_107577312
transcript_183328.known	chr7	+	2911	8	FSM	ENSG00000075790.12	ENST00000005259.9	2911	8	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_7	20.3098448029119	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATGTTGCATATTAAATT	107577114	True	NA	11	True	AATAAA	-20	NA	107580245	107620478	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_107580302_107580758_107580865_107583881_107583983_107593954_107594106_107595866_107596003_107600396_107600506_107613331_107613433_107618327
transcript_183343.nic	chr7	+	548	5	ISM	ENSG00000075790.12	ENST00000442065.5	812	8	-20	17433	0	79	5prime_fragment	FALSE	canonical	3	150	junction_1	18.389874931603	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTATTTAATTTTCTTTGT	107577114	True	NA	NA	False	ACTAAA	-3	NA	107580245	107596000	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_107580302_107580758_107580865_107583881_107583983_107593954_107594106_107595866
transcript_183347.known	chr7	+	3987	6	FSM	ENSG00000105879.12	ENST00000440859.8	3987	6	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_1	59.76286472384	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCCTAGATGAATTTTT	107740663	True	NA	NA	False	AATAAA	-19	NA	107744141	107761667	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_107744177_107748879_107749048_107753410_107753512_107753894_107753979_107755417_107755492_107758142
transcript_183349.known	chr7	-	772	2	FSM	ENSG00000241764.5	ENST00000663315.2	776	2	1	3	1	2	multi-exon	FALSE	canonical	2	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCTTTGTAGTTGTACGG	-107743590	False	120	55	True	AATAAA	-20	NA	107743606	107742753	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_107743404_107743484
transcript_18335.known	chr1	-	6520	28	FSM	ENSG00000117139.18	ENST00000367264.7	6520	28	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_23	256.27426045283	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTCAAATAATTAAATCTC	-202785438	True	NA	2	True	TTTAAA	-21	NA	202808481	202727434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_202729174_202729706_202730028_202730908_202731064_202731827_202731940_202733400_202733887_202735428_202735588_202736212_202736393_202740673_202740813_202741366_202741723_202742390_202742506_202742654_202742806_202745857_202745983_202746141_202746324_202748944_202749140_202750658_202750779_202752904_202753068_202755270_202755453_202756357_202756517_202758390_202758511_202760414_202760574_202762698_202762809_202764048_202764146_202766396_202766505_202766925_202767061_202773117_202773289_202774612_202774736_202777016_202777095_202808101
transcript_183351.known	chr7	-	553	2	FSM	ENSG00000241764.5	ENST00000609979.1	553	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAGAAAGGAGCACAATTA	-107743930	True	NA	NA	False	NA	NA	NA	107744050	107742968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_107743404_107743932
transcript_183354.known	chr7	+	587	4	FSM	ENSG00000105879.12	ENST00000493361.5	587	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	123.134073269749	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAAAATTAGAATAATTTC	107740666	True	NA	NA	False	AATAAA	-2	NA	107744144	107754183	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_107744177_107748879_107749048_107753413_107753512_107753894
transcript_183357.known	chr7	-	5650	34	FSM	ENSG00000091136.15	ENST00000222399.11	5650	34	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_33	58.4519769453132	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTGTACTTGTTACTT	-107997843	True	NA	-1	True	AATAAA	-21	NA	108003161	107923798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_107924088_107924229_107924390_107926182_107926360_107929063_107929206_107929411_107929620_107931355_107931501_107932173_107932378_107935414_107935657_107937092_107937278_107939988_107940359_107951225_107951323_107952008_107952224_107953529_107953755_107955466_107955631_107959248_107959481_107959690_107959835_107960444_107960650_107961205_107961330_107961548_107961677_107962904_107963064_107964551_107964688_107972991_107973072_107974985_107975099_107975233_107975414_107975688_107975878_107978046_107978168_107980608_107980812_107986021_107986086_107986174_107986364_107994886_107994961_107998356_107998493_108001557_108001734_108002848_108002972_108003110
transcript_183360.known	chr7	-	4865	29	FSM	ENSG00000091136.15	ENST00000678232.1	4865	29	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_28	33.4407029268958	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTTAAACTTATATATGT	-108003196	False	NA	NA	False	ATTAAA	-9	NA	108003213	107931216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_107931501_107932173_107932378_107935414_107935657_107937092_107937278_107939988_107940359_107951225_107951323_107952008_107952224_107953529_107953755_107955466_107955631_107959248_107959481_107959690_107959835_107960444_107960650_107961205_107961330_107961548_107961677_107962904_107963064_107964551_107964688_107972991_107973072_107974985_107975099_107975233_107975414_107975688_107975878_107978046_107978168_107980608_107980812_107986021_107986086_107986174_107986364_107994886_107994961_107998356_107998493_108001557_108001734_108002848_108002972_108003110
transcript_183362.known	chr7	-	4436	27	FSM	ENSG00000091136.15	ENST00000677652.1	4436	27	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_26	32.5839834325296	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAAAGAAAAACA	-108003196	False	NA	NA	False	NA	NA	NA	108003213	107935355	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_107935657_107937092_107937278_107939988_107940359_107951225_107951323_107952008_107952224_107953529_107953755_107955466_107955631_107959248_107959481_107959690_107959835_107960444_107960650_107961205_107961330_107961548_107961677_107962904_107963064_107964551_107964688_107972991_107973072_107974985_107975099_107975233_107975414_107975688_107975878_107978046_107978168_107980608_107980812_107986021_107986086_107986174_107986364_107994886_107994961_107998356_107998493_108001557_108001734_108002848_108002972_108003110
transcript_183364.known	chr7	-	3764	25	FSM	ENSG00000091136.15	ENST00000679244.1	3764	25	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	49.4531027843552	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAGGCAGGATGTGGTGA	-108003196	False	NA	NA	False	AATAAA	-16	NA	108003213	107942435	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_107942620_107951225_107951323_107952008_107952224_107953529_107953755_107955466_107955631_107959248_107959481_107959690_107959835_107960444_107960650_107961205_107961330_107961548_107961677_107962904_107963064_107964551_107964688_107972991_107973072_107974985_107975099_107975233_107975414_107975688_107975878_107978046_107978168_107980608_107980812_107986021_107986086_107986174_107986364_107994886_107994961_107998356_107998493_108001557_108001734_108002848_108002972_108003110
transcript_183370.known	chr7	+	3537	14	FSM	ENSG00000091140.15	ENST00000205402.10	3537	14	0	0	0	0	multi-exon	FALSE	canonical	3	1098	junction_10	106.790343733846	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACTGTTATCTACTAAGC	107877031	True	NA	23	True	AATAAA	-33	NA	107891182	107921198	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_107891290_107893199_107893279_107901737_107901818_107902324_107902394_107903477_107903548_107904957_107905059_107905360_107905505_107906266_107906369_107915505_107915697_107916793_107916965_107917272_107917463_107917923_107918062_107919009_107919100_107919193
transcript_183377.known	chr7	+	1993	13	FSM	ENSG00000091140.15	ENST00000440410.5	1993	13	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	358.453652280645	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTCTATAAACCGAACT	107877021	True	NA	-19	True	NA	NA	NA	107891172	107919713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_107891290_107893199_107893279_107901737_107901818_107903477_107903548_107904957_107905059_107905360_107905505_107906266_107906369_107915505_107915697_107916793_107916965_107917272_107917463_107917923_107918062_107919009_107919100_107919193
transcript_183381.known	chr7	-	5706	34	FSM	ENSG00000091136.15	ENST00000678704.1	5706	34	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_23	71.2221269566399	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTGTACTTGTTACTT	-108003196	False	NA	-1	True	AATAAA	-21	NA	108003213	107923798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_107924088_107924229_107924390_107926182_107926360_107929063_107929206_107929411_107929620_107931355_107931501_107932173_107932378_107935414_107935657_107937092_107937278_107939988_107940359_107951225_107951323_107952008_107952224_107953529_107953755_107955466_107955631_107959248_107959481_107959690_107959835_107960444_107960650_107961205_107961330_107961548_107961677_107962904_107963064_107964551_107964688_107972991_107973072_107974985_107975099_107975229_107975414_107975688_107975878_107978046_107978168_107980608_107980812_107986021_107986086_107986174_107986364_107994886_107994961_107998356_107998493_108001557_108001734_108002848_108002972_108003110
transcript_183388.known	chr7	-	4569	11	FSM	ENSG00000135241.17	ENST00000257694.13	4569	11	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_9	34.0052937055394	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGGCTTCTTTCTTTCT	-108524426	True	NA	NA	False	AATACA	-19	NA	108526135	108470416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_108472676_108479183_108479380_108487758_108487954_108491409_108491468_108496583_108496756_108497482_108497578_108502490_108502643_108514143_108514294_108514435_108515575_108521475_108521522_108526028
transcript_183398.known	chr7	-	3462	10	FSM	ENSG00000135241.17	ENST00000436062.5	3462	10	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_9	19.9654021735255	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCTATCATTAACAAAAATA	-108526286	True	NA	-51	True	TATAAA	-27	NA	108526318	108471660	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_108472676_108479183_108479380_108487758_108487954_108491409_108491468_108496583_108496756_108497482_108497578_108502490_108502643_108514143_108514294_108514435_108515575_108526028
transcript_1834.known	chr1	-	1779	5	FSM	ENSG00000198912.12	ENST00000680054.1	1779	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	147.887414947993	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATATATTTTGAAAATA	-3896637	True	NA	-43	True	AATACA	-14	NA	3900272	3889152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3890074_3890568_3891058_3891625_3891780_3892882_3892997_3900171
transcript_183400.known	chr7	-	4268	10	FSM	ENSG00000135241.17	ENST00000426128.6	4268	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	45.634890269141	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGCCATGGCTTCTTTC	-108524362	True	NA	NA	False	AATACA	-14	NA	108526071	108470421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_108472676_108479183_108479380_108487944_108487954_108491409_108491468_108496583_108496756_108497482_108497578_108502490_108502643_108514143_108514294_108514435_108515575_108526028
transcript_183404.known	chr7	-	3366	10	FSM	ENSG00000135241.17	ENST00000453144.5	3366	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	41.7239606088503	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTTGTTAAAAGGCTAAT	-108526283	True	NA	-17	True	AATAAA	-13	NA	108526315	108471626	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_108472676_108479183_108479380_108487758_108487954_108491409_108491468_108496583_108496756_108497482_108497578_108502490_108502643_108514143_108514294_108514435_108515448_108526028
transcript_18341.known	chr1	-	5362	27	FSM	ENSG00000117139.18	ENST00000650417.1	5362	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_24	205.053233094157	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACTTCTATGTTGGTTTC	-202785438	True	NA	-62	True	NA	NA	NA	202808481	202728480	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_202729174_202729706_202730028_202730908_202731064_202731827_202731940_202733400_202733887_202735428_202735588_202736212_202736393_202740673_202740813_202741366_202741723_202742390_202742506_202742654_202742806_202745857_202745983_202746141_202746324_202748944_202749140_202750658_202750779_202752904_202753068_202755270_202755453_202756357_202756517_202758390_202758511_202760414_202760574_202762698_202762809_202764048_202764146_202766925_202767061_202773117_202773285_202774612_202774736_202777016_202777095_202808101
transcript_183410.known	chr7	-	3384	3	FSM	ENSG00000177683.14	ENST00000415914.4	3384	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	9.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATCTGAAAATCCAAAATG	-108566895	True	NA	95	True	AATAAA	-18	NA	108569706	108562131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_108565106_108565829_108566023_108569489
transcript_183414.known	chr7	-	880	2	FSM	ENSG00000177683.14	ENST00000493722.1	880	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTGGCAGAAAGTCTCT	-108566834	True	NA	NA	False	TATAAA	-9	NA	108569645	108564381	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_108565106_108569489
transcript_183416.known	chr7	-	1051	2	FSM	ENSG00000177683.14	ENST00000484452.1	1051	2	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGCACTAGCATAATAAGC	-108566877	True	NA	NA	False	AATAAA	-38	NA	108569688	108565170	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_108566023_108569489
transcript_183418.known	chr7	+	2409	3	FSM	ENSG00000128590.5	ENST00000249356.4	2409	3	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	11	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGCTGAGGATTATCT	108567308	True	NA	4	True	AATAAA	-18	NA	108569873	108574850	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_108570104_108571716_108571944_108572898
transcript_183420.known	chr7	+	584	2	FSM	ENSG00000128590.5	ENST00000491582.1	584	2	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTGGGTGATTCTCTGA	108567301	True	NA	NA	False	NA	NA	NA	108569866	108572063	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_108570104_108571716
transcript_183429.known	chr7	-	1205	7	FSM	ENSG00000184903.10	ENST00000331762.7	1205	7	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_6	12.2667119564381	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGTCCTGTTTTGAGTA	-111560557	True	NA	-8	True	AATAAA	-12	NA	111562517	110663053	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_110663722_110886592_110886696_110963499_110963566_111487237_111487342_111521312_111521450_111561850_111561924_111562463
transcript_183430.known	chr7	-	2130	6	FSM	ENSG00000184903.10	ENST00000405709.7	2130	6	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	8.74070935336486	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCATGTTTATGAAAGCTT	-111560532	True	NA	NA	False	AATAAA	-15	NA	111562492	110662643	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_110663722_110886592_110886696_110963499_110963566_111487237_111487342_111521312_111521450_111561850
transcript_183432.known	chr7	+	1736	12	FSM	ENSG00000198839.10	ENST00000361946.8	1736	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	39.481557573502	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTCAGTCTCCTCCCCA	112204223	True	NA	76	True	TATAAA	-18	NA	112206694	112343094	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_112206808_112286876_112287075_112295868_112295958_112296228_112296312_112318181_112318274_112327716_112327828_112330083_112330217_112336103_112336172_112337729_112337827_112339842_112339886_112340871_112341047_112342560
transcript_183442.known	chr7	+	1075	7	FSM	ENSG00000198839.10	ENST00000450657.1	1075	7	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_4	12.8797860575744	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCATTTGGATATCCAC	112204229	True	NA	NA	False	NA	NA	NA	112206700	112330474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_112206808_112286872_112287075_112295868_112295958_112296228_112296312_112318181_112318274_112327716_112327828_112330083
transcript_183444.known	chr7	+	2218	2	FSM	ENSG00000198839.10	ENST00000421043.5	2218	2	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGTATGTGTAGCATCT	112204225	True	NA	NA	False	NA	NA	NA	112206696	112288979	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_112206808_112286872
transcript_183445.known	chr7	+	1834	13	FSM	ENSG00000006652.15	ENST00000005558.8	1834	13	0	0	0	0	multi-exon	TRUE	canonical	2	10	junction_1	64.072170679286	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTGAAGACTATTTTCTA	112422909	True	NA	NA	False	NA	NA	NA	112423143	112475527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_112423433_112450507_112450783_112455762_112455868_112456001_112456087_112456913_112457039_112458860_112459019_112461865_112461917_112462000_112462180_112462269_112462379_112467980_112468116_112472218_112472348_112472765_112472862_112475429
transcript_183447.known	chr7	+	3650	13	FSM	ENSG00000006652.15	ENST00000675578.1	3650	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	65.941209084726	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATTATAAATAAATAATGAA	NA	False	NA	-24	True	NA	NA	NA	112422886	112477156	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_112423433_112450577_112450783_112455762_112455868_112456001_112456087_112456913_112457039_112458860_112459019_112461865_112461917_112462000_112462180_112462269_112462379_112467980_112468116_112472218_112472348_112472765_112472862_112475429
transcript_183449.known	chr7	+	2439	13	FSM	ENSG00000006652.15	ENST00000675041.1	2439	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	83.370158530096	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCATTTTACTTTGAAAT	112445755	True	NA	-30	True	NA	NA	NA	112450459	112476149	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_112450783_112455762_112455868_112456001_112456087_112456913_112457039_112458860_112459019_112461865_112461917_112462000_112462180_112462269_112462379_112465614_112465839_112467980_112468116_112472218_112472348_112472765_112472862_112475429
transcript_18345.known	chr1	-	6149	27	FSM	ENSG00000117139.18	ENST00000649542.1	6149	27	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_26	203.870336011214	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTAGTTGTCTGCAGTT	-202807993	False	NA	-16	True	ATTAAA	-15	NA	202808049	202727404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_202729174_202729706_202730028_202730908_202731064_202731827_202731940_202733400_202733887_202735428_202735588_202736212_202736393_202740673_202740813_202741366_202741723_202742390_202742506_202742654_202742806_202745857_202745983_202746141_202746324_202748944_202749140_202750658_202750779_202752904_202753068_202755270_202755453_202756357_202756517_202758390_202758511_202760414_202760574_202762698_202762809_202764048_202764146_202766925_202767061_202773117_202773289_202774612_202774736_202777016_202777095_202807962
transcript_183450.known	chr7	+	2415	13	FSM	ENSG00000006652.15	ENST00000674887.1	2415	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	83.370158530096	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCATTTTACTTTGAAAT	112445755	True	NA	-30	True	NA	NA	NA	112450459	112476149	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_112450783_112455762_112455868_112456001_112456087_112456913_112457039_112458860_112459019_112461865_112461917_112462000_112462180_112462269_112462379_112465638_112465839_112467980_112468116_112472218_112472348_112472765_112472862_112475429
transcript_183454.known	chr7	+	2364	13	FSM	ENSG00000006652.15	ENST00000674915.1	2364	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_10	79.8924624451866	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATAAAGATTTTTTTCC	112445755	True	NA	-16	True	NA	NA	NA	112450459	112476163	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_112450783_112455762_112455868_112456001_112456087_112456913_112457039_112458860_112459019_112461865_112461917_112462000_112462180_112462269_112462379_112467980_112468116_112470898_112471034_112472218_112472348_112472765_112472862_112475429
transcript_183456.known	chr7	+	3232	12	FSM	ENSG00000006652.15	ENST00000621379.4	3232	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	68.8725016795768	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGGTTTTTGTTTGTTTTT	112422909	True	NA	20	True	AATAAA	-32	NA	112423143	112477200	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_112423433_112455762_112455868_112456001_112456087_112456913_112457039_112458860_112459019_112461865_112461917_112462000_112462180_112462269_112462379_112467980_112468116_112472218_112472348_112472765_112472862_112475429
transcript_183459.known	chr7	+	3269	12	FSM	ENSG00000006652.15	ENST00000403825.8	3269	12	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_4	36.2712462673276	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTTGTTTGTTTTTGAG	112445755	True	NA	23	True	AATAAA	-35	NA	112450459	112477203	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_112450783_112455762_112455868_112456001_112456087_112456913_112457039_112458860_112459019_112461865_112461917_112462000_112462180_112462269_112462379_112467980_112468116_112472218_112472348_112472765_112472862_112475429
transcript_183466.known	chr7	+	3397	12	FSM	ENSG00000006652.15	ENST00000535603.5	3397	12	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	67.4068687183526	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGGTTTTTGTTTGTTTTT	112452042	False	NA	20	True	AATAAA	-32	NA	112452057	112477200	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_112452512_112455762_112455868_112456001_112456087_112456913_112457039_112458860_112459019_112461865_112461917_112462000_112462180_112462269_112462379_112467980_112468116_112472218_112472348_112472765_112472862_112475429
transcript_183473.known	chr7	+	1938	4	FSM	ENSG00000006652.15	ENST00000429071.5	1938	4	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_1	8.83176086632785	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGTTAATAAATGTATT	112445753	True	NA	NA	False	NA	NA	NA	112450457	112458336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_112450783_112455762_112455868_112456001_112456087_112456913
transcript_183480.known	chr7	-	2659	6	FSM	ENSG00000146802.13	ENST00000454074.5	2659	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	57.6589975632598	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTCTCACTTTGTCTTT	-112788937	True	NA	NA	False	NA	NA	NA	112790393	112767084	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_112767745_112772780_112773056_112775175_112775319_112783697_112784954_112788453_112788545_112790159
transcript_183481.known	chr7	-	7276	5	FSM	ENSG00000146802.13	ENST00000312814.11	7276	5	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_3	14.3003496460751	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCGCATTAATTTTTAATAT	-112788937	True	NA	NA	False	ATTAAA	-29	NA	112790393	112762376	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_112767745_112772780_112773056_112775175_112775319_112783697_112784954_112790159
transcript_183483.known	chr7	-	1291	4	FSM	ENSG00000146802.13	ENST00000447395.5	1291	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	61.4401244211703	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGTATGCTGTATTTT	-112788967	True	NA	NA	False	NA	NA	NA	112790423	112767135	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_112767745_112772780_112773056_112775175_112775319_112790159
transcript_183484.known	chr7	-	3940	5	FSM	ENSG00000164603.12	ENST00000297145.9	3940	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	5.40254569624358	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGTCTGTTACTTGTA	-112938690	True	NA	-1	True	ATTAAA	-20	NA	112939875	112819146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_112822374_112832560_112832676_112895568_112895740_112915305_112915448_112939590
transcript_183486.known	chr7	-	962	3	FSM	ENSG00000214194.9	ENST00000441359.1	962	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	170.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATTTAATGTTAAAAAAA	-113116065	True	NA	NA	False	AAAACA	-45	NA	113118560	113116860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_113117608_113118067_113118162_113118439
transcript_183487.known	chr7	-	1011	3	FSM	ENSG00000214194.9	ENST00000397764.8	1011	3	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_2	37	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCGTGTCCATTTCTTA	-113116059	True	NA	0	True	ATTAAA	-27	NA	113118554	113116717	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_113117608_113118067_113118162_113118527
transcript_183491.known	chr7	+	4393	5	FSM	ENSG00000135272.13	ENST00000393486.6	5373	5	265	715	-202	-715	multi-exon	FALSE	canonical	3	48	junction_1	6.09815545882523	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATCTAAGGCATAGAGTG	114922333	False	NA	NA	False	AATAAA	-15	NA	114922358	115019202	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_114922637_114922926_114923128_114942274_114942398_114979505_114979782_115015687
transcript_183492.known	chr7	+	484	3	FSM	ENSG00000135272.13	ENST00000448022.1	484	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	14	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGAATTAGCTTCTTTG	114922532	False	NA	NA	False	AATAAA	-30	NA	114922560	114923665	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_114922637_114922926_114923128_114923458
transcript_183493.known	chr7	+	816	5	FSM	ENSG00000225535.7	ENST00000669990.1	816	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	0.707106781186548	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTGACTCTGCTTGTTT	115030600	True	NA	NA	False	AATAAA	-16	NA	115030647	115125935	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_115030769_115031786_115031826_115118732_115118826_115122177_115122248_115125442
transcript_183494.known	chr7	+	2953	3	FSM	ENSG00000105971.15	ENST00000222693.5	2953	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	3	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTGTGTATTGCTTTT	116499397	True	NA	8	True	AATAAA	-16	NA	116499737	116508541	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_116499932_116500259_116500448_116505970
transcript_183497.known	chr7	+	2736	7	FSM	ENSG00000135269.18	ENST00000358204.9	2736	7	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_2	19.9888858007533	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCATTGTATCTTTTTAT	116205315	True	NA	NA	False	AATAAA	-17	NA	116210538	116258783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_116210735_116234533_116234620_116249019_116249273_116250160_116250497_116251759_116251976_116252317_116252477_116257293
transcript_183499.nic	chr7	+	1533	6	ISM	ENSG00000135269.18	ENST00000358204.9	2736	7	-25	6045	8	0	5prime_fragment	FALSE	canonical	3	379	junction_2	21.8961183774659	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAATGGGAATGAGATT	116205290	True	NA	5	True	AATAAA	-18	NA	116210513	116252738	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_116210735_116234533_116234620_116249019_116249273_116250160_116250497_116251759_116251976_116252317
transcript_183501.nic	chr7	+	2669	6	NIC	ENSG00000135269.18	novel	2736	7	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	152.950187969809	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCATTGTATCTTTTTAT	116205296	True	NA	NA	False	AATAAA	-17	NA	116210519	116258783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_116210735_116249019_116249273_116250160_116250497_116251759_116251976_116252317_116252477_116257293
transcript_183507.known	chr7	+	873	3	FSM	ENSG00000135269.18	ENST00000461440.5	873	3	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATCTTAAGATGGTAAAG	116205282	True	NA	NA	False	NA	NA	NA	116210505	116249577	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_116210735_116234533_116234620_116249019
transcript_183510.known	chr7	+	2456	3	FSM	ENSG00000105974.13	ENST00000341049.7	2456	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	68.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCAGCTTTATTATTTTT	116524642	True	NA	16	True	AATAAA	-18	NA	116525035	116561179	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_116525093_116526524_116526690_116558945
transcript_183513.known	chr7	+	1653	3	FSM	ENSG00000105974.13	ENST00000451122.5	1653	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	76.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACAACCTCAACTGCCTA	116524615	True	NA	NA	False	AAAAAG	-8	NA	116525008	116559636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_116525806_116526524_116526690_116558945
transcript_183516.known	chr7	+	845	3	FSM	ENSG00000105974.13	ENST00000393468.1	845	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	75.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTTTTTATTTGCATGT	116526070	False	NA	87	True	TTTAAA	-21	NA	116526276	116559513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_116526389_116526524_116526690_116558945
transcript_183519.known	chr7	+	2628	2	FSM	ENSG00000105974.13	ENST00000393467.1	2628	2	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGTCAGCTTTATTATT	116525089	True	NA	13	True	AATAAA	-15	NA	116526292	116561176	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_116526690_116558945
transcript_183522.known	chr7	+	2652	3	FSM	ENSG00000105974.13	ENST00000405348.6	2652	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	83.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCAGCTTTATTATTTTT	116525324	True	NA	16	True	AATAAA	-18	NA	116525530	116561179	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_116525784_116526524_116526690_116558945
transcript_183523.known	chr7	+	6822	21	FSM	ENSG00000105976.16	ENST00000397752.8	6822	21	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	8.83685464404615	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTGTATACTGATAGTG	116672181	False	NA	5	True	ATTAAA	-15	NA	116672195	116798377	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_116672578_116699070_116700285_116731667_116731860_116739949_116740085_116740851_116741026_116755354_116755516_116757436_116757540_116757637_116757775_116758458_116758621_116759390_116759491_116763049_116763269_116769644_116769792_116771497_116771655_116771848_116771990_116774880_116775112_116777388_116777470_116778775_116778958_116781987_116782098_116783303_116783470_116795654_116795792_116795886
transcript_183526.nic	chr7	+	1481	2	ISM	ENSG00000105976.16	ENST00000318493.11	6876	21	-168	98376	-168	402	5prime_fragment	FALSE	canonical	3	20	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGATCCACAAAGAAGGAAG	116672006	False	NA	NA	False	NA	NA	NA	116672027	116700001	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_116672578_116699070
transcript_183529.known	chr7	+	1214	10	FSM	ENSG00000198898.15	ENST00000426421.5	1214	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	468.446710936958	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGATGTCTTTTGGTTTA	116847619	True	NA	NA	False	NA	NA	NA	116862599	116918188	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_116862651_116888126_116888191_116892993_116893046_116898771_116898836_116904176_116904384_116906262_116906343_116910212_116910312_116912068_116912141_116916059_116916123_116917726
transcript_183533.known	chr7	+	5068	10	FSM	ENSG00000198898.15	ENST00000361183.8	5068	10	0	0	0	0	multi-exon	FALSE	canonical	3	1365	junction_1	82.062306951622	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTCGTTCATTGCAAATG	116847606	True	NA	NA	False	ATTAAA	-18	NA	116862586	116922049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_116862651_116888126_116888191_116892993_116893046_116898771_116898836_116904176_116904384_116906262_116906343_116910232_116910312_116912068_116912141_116916059_116916123_116917726
transcript_183541.known	chr7	+	809	5	FSM	ENSG00000198898.15	ENST00000490693.5	809	5	0	0	0	0	multi-exon	FALSE	canonical	3	1365	junction_1	84.1468210926592	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGTTTCTGTATTTTA	116847619	True	NA	NA	False	AATAAA	-18	NA	116862599	116904754	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_116862651_116888126_116888191_116892993_116893046_116898771_116898836_116904176
transcript_183543.known	chr7	+	621	2	FSM	ENSG00000198898.15	ENST00000461878.5	621	2	0	0	0	0	multi-exon	FALSE	canonical	3	1365	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGTGTGGTGGCATGCT	116847622	True	NA	NA	False	NA	NA	NA	116862602	116888699	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_116862651_116888126
transcript_183544.known	chr7	+	517	6	FSM	ENSG00000198898.15	ENST00000417431.5	517	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	601.824692082337	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATCTTGAAAATTCAGGTA	116847622	True	NA	NA	False	NA	NA	NA	116862602	116910294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_116862651_116888126_116888191_116892993_116893046_116898771_116898836_116904176_116904384_116910212
transcript_183546.known	chr7	+	2899	16	FSM	ENSG00000004866.22	ENST00000265437.9	2899	16	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_6	25.5464718155408	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGGTAGTGGTCTCTGC	116952339	True	NA	NA	False	AATAAA	-19	NA	116953326	117223907	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_116953692_117099761_117099845_117119560_117119721_117129792_117129848_117130490_117130607_117131884_117131961_117134123_117134193_117136080_117136236_117138434_117138533_117170861_117170977_117189320_117189394_117190833_117190937_117209786_117209938_117219083_117219177_117221922_117222063_117222860
transcript_183547.known	chr7	+	2093	16	FSM	ENSG00000004866.22	ENST00000323984.8	2093	16	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_6	24.912290585617	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCCTGGGAACCTGGATC	116953477	False	NA	6	True	AATAAA	-19	NA	116953500	117230176	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_116953692_117099761_117099845_117119560_117119721_117129792_117129848_117130490_117130607_117131884_117131961_117134123_117134193_117136080_117136236_117138434_117138533_117170861_117170977_117189320_117189394_117190833_117190937_117209786_117209938_117219083_117219177_117221922_117222063_117229761
transcript_183549.known	chr7	+	2110	15	FSM	ENSG00000004866.22	ENST00000393451.7	2110	15	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_14	18.4679811168035	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTATCCTCCTGTGT	116952354	True	NA	3	True	AATAAA	-21	NA	116953341	117230103	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_116953692_117099761_117099845_117119560_117119721_117129792_117129848_117130490_117130607_117131884_117131961_117136080_117136236_117138434_117138533_117170861_117170977_117189320_117189394_117190833_117190937_117209786_117209938_117219083_117219177_117221922_117222063_117229761
transcript_183557.known	chr7	-	5904	23	FSM	ENSG00000077063.11	ENST00000160373.8	5904	23	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_9	14.6930016511488	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTGCTGTACTTTTTA	-117870868	True	NA	-3	True	AATAAA	-18	NA	117873441	117710650	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_117711783_117718017_117718120_117719503_117719637_117721066_117721131_117724546_117724733_117725051_117725258_117728088_117728268_117734912_117735101_117735268_117735422_117745830_117745931_117746012_117746100_117756554_117756635_117757874_117757971_117760434_117760711_117767058_117767177_117777510_117777766_117780440_117780592_117782861_117782962_117784250_117784455_117791127_117792782_117810764_117810990_117861208_117861317_117873334
transcript_183558.known	chr7	-	5517	23	FSM	ENSG00000077063.11	ENST00000441556.5	5517	23	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_19	17.6342547942566	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTATCTTTCTTACAAAA	-117870856	True	NA	-18	True	AATAAA	-2	NA	117873429	117710862	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_117711783_117718017_117718120_117719503_117719637_117721066_117721131_117724546_117724733_117725051_117725258_117728088_117728268_117734912_117735101_117735268_117735422_117745830_117745931_117746012_117746100_117756554_117756635_117757874_117757971_117760434_117760711_117767058_117767177_117777510_117777766_117780440_117780592_117782861_117782962_117784250_117784455_117791290_117792782_117810764_117810990_117861208_117861317_117873334
transcript_18356.known	chr1	-	6678	26	FSM	ENSG00000117139.18	ENST00000647757.1	6678	26	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_25	202.91903409981	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGACTTCTAGTTGTC	-202807996	False	NA	-23	True	ATTAAA	-8	NA	202808052	202727411	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_202730028_202730908_202731064_202731827_202731940_202733400_202733887_202735428_202735588_202736212_202736393_202740673_202740813_202741366_202741723_202742390_202742506_202742654_202742806_202745857_202745983_202746141_202746324_202748944_202749140_202750658_202750779_202752904_202753068_202755270_202755453_202756357_202756517_202758390_202758511_202760414_202760574_202762698_202762809_202764048_202764146_202766925_202767061_202773117_202773289_202774612_202774736_202777016_202777095_202807962
transcript_183563.nic	chr7	-	3872	13	NIC	ENSG00000077063.11	novel	530	4	NA	NA	-303	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	20.8606487594865	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTGACAAAAGTTGTTTC	-117873693	False	NA	-8	True	AATAAA	-17	NA	117873744	117755379	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_117755575_117756554_117756635_117757874_117757971_117760434_117760711_117767058_117767177_117777510_117777766_117780440_117780592_117782861_117782962_117784250_117784455_117791127_117792782_117810764_117810990_117861208_117861317_117873334
transcript_183566.nic	chr7	-	939	4	ISM	ENSG00000077063.11	ENST00000441556.5	5517	23	-315	81723	-303	0	5prime_fragment	FALSE	canonical	3	52	junction_3	12.3648246606609	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGACGAATGAATTAGAA	-117873693	False	NA	13	True	NA	NA	NA	117873744	117792585	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_117792782_117810764_117810990_117861208_117861317_117873334
transcript_183567.known	chr7	+	12384	4	FSM	ENSG00000128534.8	ENST00000249299.7	12384	4	0	0	0	0	multi-exon	FALSE	canonical	3	611	junction_1	64.3238334954903	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGAATGTCCATGTTTTT	118177815	True	NA	NA	False	AATAAA	-18	NA	118184163	118204035	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_118184255_118185653_118185695_118188277_118188406_118191911
transcript_183568.nic	chr7	+	599	4	NIC	ENSG00000128534.8	novel	1920	3	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	329.940398658101	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTTTTTTGCCTAAATA	118177762	True	NA	29	True	ATTAAA	-29	NA	118184110	118192164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_118184281_118185646_118185695_118188277_118188406_118191911
transcript_183569.known	chr7	+	1920	3	FSM	ENSG00000128534.8	ENST00000422760.1	1920	3	0	0	0	0	multi-exon	FALSE	canonical	3	701	junction_2	33.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTTTTTTGCCTAAATA	118177807	True	NA	29	True	ATTAAA	-29	NA	118184155	118192164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_118185695_118188277_118188406_118191911
transcript_18357.known	chr1	-	9485	26	FSM	ENSG00000117139.18	ENST00000648338.1	9485	26	0	0	0	0	multi-exon	FALSE	canonical	3	823	junction_20	66.5288629092667	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACCAAAACTTTTAGCTCC	-202785430	True	NA	NA	False	AATAAA	-22	NA	202808473	202724886	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_202730028_202730908_202731064_202731827_202731940_202733400_202733887_202735428_202735588_202736212_202736393_202740673_202740813_202741366_202741723_202742390_202742506_202742654_202742806_202745857_202745983_202746141_202746324_202748944_202749140_202750658_202750779_202752904_202753068_202755270_202755453_202756357_202756517_202758390_202758511_202760414_202760574_202762698_202762809_202764048_202764146_202766925_202767061_202773117_202773289_202774612_202774736_202777016_202777095_202808101
transcript_183571.known	chr7	+	5830	6	FSM	ENSG00000184408.10	ENST00000331113.9	5830	6	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_3	3.44093010681705	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGACTGTTGCCCTATTT	120272864	True	NA	10	True	AATAAA	-28	NA	120273174	120750337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_120275748_120732902_120733066_120741533_120741630_120742509_120742603_120745779_120746028_120747680
transcript_183574.nic	chr7	-	2849	9	NIC	ENSG00000106025.9	novel	2585	8	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_4	65.1046033318689	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGTCTCTGCCTACTT	-120858154	False	NA	-2	True	AATAAA	-18	NA	120858165	120787319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_120788898_120806548_120806693_120810462_120810571_120814004_120814248_120815728_120815804_120838776_120838913_120840026_120840110_120856697_120856834_120857819
transcript_183575.known	chr7	-	2585	8	FSM	ENSG00000106025.9	ENST00000222747.8	2585	8	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_3	20.735457160947	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGTCTCTGCCTACTT	-120856536	True	NA	-2	True	AATAAA	-18	NA	120858144	120787319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_120788898_120806548_120806693_120810462_120810571_120815728_120815804_120838776_120838913_120840026_120840110_120856697_120856834_120857819
transcript_183579.nnic	chr7	-	738	3	NNC	ENSG00000106025.9	novel	2585	8	NA	NA	-21	-16349	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_1	65.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTAATACTTTACATTG	-120858154	False	NA	-14	True	AATAAA	-19	NA	120858165	120855125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_120855382_120856697_120856834_120857819
transcript_183580.known	chr7	+	3749	12	FSM	ENSG00000071243.16	ENST00000315870.10	3749	12	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_5	29.1728958322562	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGCTGAGTGTTTGATAA	120949748	True	NA	12	True	AATAAA	-22	NA	120950776	120977216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_120950925_120951163_120951236_120953303_120953405_120955558_120955625_120964741_120964839_120966625_120966698_120967528_120967649_120967933_120968092_120969010_120969205_120970687_120970881_120973204_120973244_120974727
transcript_183583.known	chr7	+	1718	11	FSM	ENSG00000071243.16	ENST00000427726.5	1718	11	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	53.9926846896874	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAGTGCTTCTAAAAAGAA	120949756	True	NA	NA	False	TATAAA	-22	NA	120950784	120975290	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_120950925_120951163_120951236_120953303_120953405_120955558_120955625_120966625_120966698_120967528_120967649_120967933_120968092_120969010_120969205_120970687_120970881_120973204_120973244_120974727
transcript_183585.known	chr7	+	1222	5	FSM	ENSG00000071243.16	ENST00000339121.9	1222	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	78.8257572117135	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTGTATTCATCTC	NA	False	NA	9	True	CATAAA	-20	NA	120950762	120956980	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_120950925_120951163_120951236_120953303_120953405_120955558_120955625_120956159
transcript_183597.known	chr7	-	2455	10	FSM	ENSG00000196937.11	ENST00000359943.8	2455	10	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_7	196.126061753061	239	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATACTCTTGGTTTTGCT	-121390588	True	NA	-28	True	AATAAA	-28	NA	121396308	121348877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_121350551_121351142_121351270_121360042_121360128_121362896_121362948_121364129_121364189_121371299_121371424_121372109_121372140_121378909_121379015_121382956_121383011_121396161
transcript_183606.known	chr7	+	5633	31	FSM	ENSG00000106278.12	ENST00000651065.1	5633	31	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_23	166.487436963474	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATAACACCTTACCAAAC	121865176	True	NA	-70	True	AATAGA	-31	NA	121873088	122061957	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_121873558_121928155_121928222_121967950_121968131_121972540_121972693_121976172_121976269_121976784_121976852_121983664_121983823_121983966_121984118_121996381_121996567_121997879_121998007_122004613_122004661_122010333_122011310_122019123_122019269_122028551_122028644_122031473_122031560_122034094_122034116_122034281_122034379_122036599_122036683_122038754_122038890_122039453_122039589_122040815_122040980_122042607_122042744_122044421_122044569_122047673_122047791_122051427_122051522_122051865_122051940_122053909_122054039_122054940_122055088_122058799_122058943_122059752_122059889_122061079
transcript_183608.nic	chr7	+	5579	30	NIC	ENSG00000106278.12	novel	8103	30	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	95	junction_12	140.492144998157	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTGCTTGTGGAGC	121865192	True	NA	9	True	AATAAA	-19	NA	121873104	122062036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_121873558_121928155_121928222_121967950_121968131_121972540_121972693_121976172_121976269_121976784_121976852_121983664_121983823_121983966_121984118_121996381_121996567_121997879_121998007_122004613_122004661_122010333_122011310_122019123_122019269_122028551_122028644_122031473_122031560_122034094_122034116_122034281_122034379_122036599_122036683_122038754_122038890_122039453_122039589_122040815_122040980_122042607_122042744_122044421_122044569_122051427_122051522_122051865_122051940_122053909_122054039_122054940_122055088_122058799_122058943_122059752_122059889_122061079
transcript_183611.known	chr7	+	4627	29	FSM	ENSG00000106278.12	ENST00000449182.1	4627	29	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_15	152.470890497103	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTATATCATTAACAATGT	121873280	False	NA	-79	True	NA	NA	NA	121873360	122061361	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_121873558_121928155_121928222_121967950_121968131_121972540_121972693_121976172_121976269_121976784_121976852_121983664_121983823_121983966_121984118_121996381_121996567_121997879_121998007_122004613_122004661_122010333_122011310_122019123_122019269_122028551_122028644_122031473_122031560_122034281_122034379_122036599_122036683_122038754_122038890_122039453_122039589_122040815_122040980_122042607_122042744_122044421_122044569_122051427_122051522_122051865_122051940_122053909_122054039_122054940_122055088_122058799_122058943_122059752_122059889_122061079
transcript_183619.nic	chr7	+	1727	12	ISM	ENSG00000106278.12	ENST00000449182.1	4627	29	-218	50945	-9	-2896	5prime_fragment	FALSE	canonical	3	248	junction_3	22.5945213867038	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACCCCAGATTTCTACCA	121865230	True	NA	NA	False	NA	NA	NA	121873142	122010416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_121873558_121928155_121928222_121967950_121968131_121972540_121972693_121976172_121976269_121976784_121976852_121983664_121983823_121983966_121984118_121996381_121996567_121997879_121998007_122004613_122004661_122010333
transcript_183624.nic	chr7	+	2633	9	ISM	ENSG00000106278.12	ENST00000449182.1	4627	29	-265	63679	7	-15630	5prime_fragment	FALSE	canonical	3	248	junction_3	23.6507795854598	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTAGCTTTCCAGTTCTTC	121865183	True	NA	NA	False	AAAAAG	-17	NA	121873095	121997682	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_121873558_121928155_121928222_121967950_121968131_121972540_121972693_121976172_121976269_121976784_121976852_121983664_121983823_121983966_121984118_121996381
transcript_18363.nic	chr1	-	3573	22	ISM	ENSG00000117139.18	ENST00000648473.1	6703	27	-50	8060	-44	0	5prime_fragment	FALSE	canonical	3	823	junction_16	68.6568251318702	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAGCACCAAATTAG	-202808475	False	NA	NA	False	NA	NA	NA	202808531	202735504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_202735588_202736212_202736393_202740673_202740813_202741366_202741723_202742390_202742506_202742654_202742806_202745857_202745983_202746141_202746324_202748944_202749140_202750658_202750779_202752904_202753068_202755270_202755453_202756357_202756517_202758390_202758511_202760414_202760574_202762698_202762809_202764048_202764146_202766925_202767061_202773117_202773289_202774612_202774736_202777016_202777095_202808101
transcript_183630.nic	chr7	+	511	3	ISM	ENSG00000106278.12	ENST00000449182.1	4627	29	-229	93392	-20	946	5prime_fragment	FALSE	canonical	3	278	junction_1	28	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGGGGAAAGAAATATCCAA	121865219	True	NA	NA	False	ACTAAA	-44	NA	121873131	121967969	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_121873558_121928155_121928222_121967950
transcript_183634.nic	chr7	+	1790	2	ISM	ENSG00000106278.12	ENST00000471837.1	568	3	-29	37504	-20	-37504	5prime_fragment	FALSE	canonical	3	278	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCAAGCCAGGTGTGGTG	121865219	True	NA	NA	False	NA	NA	NA	121873131	121929519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_121873558_121928155
transcript_183644.known	chr7	-	5774	24	FSM	ENSG00000008311.16	ENST00000679511.1	5774	24	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_23	1377.73664149145	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTCAAGTTGTTATAAAA	-122099915	True	NA	7	True	NA	NA	NA	122144239	122073582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_122076608_122077837_122078015_122078861_122078951_122079596_122079713_122081499_122081596_122086011_122086180_122091702_122091844_122092842_122092952_122093047_122093159_122098449_122098577_122098744_122098867_122101370_122101439_122101620_122101681_122113117_122113230_122113597_122113721_122115073_122115223_122116632_122116761_122116878_122116958_122118306_122118454_122118562_122118631_122126374_122126460_122129360_122129538_122133516_122133735_122144160
transcript_183646.known	chr7	-	4963	24	FSM	ENSG00000008311.16	ENST00000681434.1	4963	24	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_12	1386.7141958131	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGGTAAATTAAAATTAAAA	-122099973	True	NA	NA	False	AATAAA	-35	NA	122144297	122074494	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_122076608_122077837_122078015_122078861_122078951_122079596_122079713_122081499_122081596_122082787_122082892_122086011_122086180_122091702_122091844_122092842_122092952_122093047_122093159_122098449_122098577_122098744_122098867_122101620_122101681_122113117_122113230_122113597_122113721_122115073_122115223_122116632_122116761_122116878_122116958_122118306_122118454_122118562_122118631_122126374_122126460_122129360_122129538_122133516_122133742_122144160
transcript_183663.known	chr7	-	5728	23	FSM	ENSG00000008311.16	ENST00000679847.1	5728	23	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_11	1392.71120406705	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTCAAGTTGTTATAAAA	-122099930	True	NA	7	True	NA	NA	NA	122144254	122073582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_122076608_122077837_122078015_122078861_122078951_122079596_122079713_122081499_122081596_122086011_122086180_122091702_122091844_122092842_122092952_122093047_122093159_122098449_122098577_122098744_122098867_122101620_122101681_122113117_122113230_122113597_122113721_122115073_122115223_122116632_122116761_122116878_122116958_122118306_122118454_122118562_122118631_122126374_122126460_122129360_122129538_122133516_122133742_122144160
transcript_183683.known	chr7	-	8554	22	FSM	ENSG00000008311.16	ENST00000681708.1	8554	22	0	0	0	0	multi-exon	FALSE	canonical	3	705	junction_21	1360.29019679667	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATTAAATTACAAATGCA	-122099984	True	NA	25	True	NA	NA	NA	122144308	122073564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_122076608_122077837_122078015_122078861_122078951_122079596_122079713_122081499_122081596_122086011_122086180_122091702_122091844_122092842_122092952_122093047_122093159_122098449_122098577_122098744_122101681_122113117_122113230_122113597_122113721_122115073_122115223_122116632_122116761_122116878_122116958_122118306_122118454_122118562_122118631_122126374_122126460_122129360_122129538_122133516_122133742_122144160
transcript_183685.known	chr7	-	4519	25	FSM	ENSG00000008311.16	ENST00000679864.1	4519	25	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	1372.26316958418	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGGCAACACAGTGAAACT	-122099976	True	NA	NA	False	NA	NA	NA	122144300	122064582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_122064651_122074973_122076608_122077837_122078015_122078861_122078951_122079596_122079713_122081499_122081596_122086011_122086180_122091702_122091844_122092842_122092952_122093047_122093159_122098449_122098577_122098744_122098867_122101370_122101439_122101620_122101681_122113117_122113230_122113597_122113721_122115073_122115223_122116632_122116761_122116878_122116958_122118306_122118454_122118562_122118631_122126374_122126460_122129360_122129538_122133516_122133742_122144160
transcript_183694.known	chr7	-	1816	13	FSM	ENSG00000008311.16	ENST00000473553.5	1816	13	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_10	1430.00958378684	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGGAGTGCAGTGGCGC	-122099931	True	NA	72	True	NA	NA	NA	122144255	122076148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_122076608_122077837_122078015_122078861_122078951_122079596_122079713_122081499_122081596_122086011_122086180_122091702_122091844_122092842_122092952_122093047_122093159_122098449_122098577_122101370_122101439_122101620_122101681_122144160
transcript_1837.known	chr1	-	1645	4	FSM	ENSG00000198912.12	ENST00000361605.4	1645	4	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_2	18.0616229121921	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAAAGCAGTCGTATGT	-3896637	True	NA	-23	True	AATAAA	-17	NA	3900272	3889132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_3890074_3890568_3891058_3892882_3892997_3900171
transcript_183711.nic	chr7	-	2612	6	NIC	ENSG00000128610.12	novel	1368	5	NA	NA	-59	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_4	19.5099974372115	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGGGCTCTGTTCATAC	-122310393	True	NA	-20	True	AATAAA	-31	NA	122310750	122301302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_122302356_122302798_122302932_122303176_122303312_122303636_122303859_122304008_122304512_122310184
transcript_183721.known	chr7	-	1368	5	FSM	ENSG00000128610.12	ENST00000427185.2	1368	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	21.7987958383026	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGCCCCCACGCTGAGGC	-122304485	False	NA	NA	False	NA	NA	NA	122304499	122301968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_122302356_122302798_122302932_122303176_122303312_122303636_122303859_122304008
transcript_183722.nnic	chr7	-	2392	5	NNC	ENSG00000128610.12	novel	2435	4	NA	NA	-33	0	intron_retention	FALSE	canonical	1	5	junction_4	22.2317340754157	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGGGCTCTGTTCATAC	-122304769	False	357	-20	True	AATAAA	-31	NA	122304783	122301302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_122302356_122302798_122302932_122303176_122303312_122303636_122304512_122304587
transcript_183726.nic	chr7	-	2818	5	NIC	ENSG00000128610.12	novel	2435	4	NA	NA	-115	0	intron_retention	FALSE	canonical	3	42	junction_4	6.21992765231236	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGGGCTCTGTTCATAC	-122310785	False	NA	-20	True	AATAAA	-31	NA	122310806	122301302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_122302356_122302798_122302932_122303176_122303312_122303636_122304512_122310184
transcript_183737.known	chr7	-	2435	4	FSM	ENSG00000128610.12	ENST00000442488.7	2435	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0.471404520791032	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGGGCTCTGTTCATAC	-122304736	False	357	-20	True	AATAAA	-31	NA	122304750	122301302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_122302356_122302798_122302932_122303176_122303312_122303636
transcript_183740.nnic	chr7	+	2171	3	NIC	ENSG00000230316.8	novel	3039	4	NA	NA	-97	-943	intron_retention	FALSE	canonical	3	19	junction_1	0.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAGGTATGCATGCTTTG	122304831	False	NA	9	True	AAAAAG	-15	NA	122304852	122307614	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_122306263_122306515_122306661_122306998
transcript_183746.nic	chr7	-	4318	29	NIC	ENSG00000081803.17	novel	6065	30	NA	NA	21	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_12	15.6744218394172	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCCTGAATGTAGAGTA	-122886725	False	NA	NA	False	AATAAA	-23	NA	122886738	122320036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_122320339_122325476_122325582_122345573_122345682_122360787_122360821_122360929_122361014_122379367_122379443_122386294_122386310_122387025_122387174_122388582_122388739_122393440_122393583_122407539_122407697_122416060_122416165_122436359_122436381_122438340_122438465_122441511_122441576_122451373_122451476_122471374_122471563_122474380_122474518_122490080_122490282_122491311_122491421_122513248_122513316_122554549_122554690_122581178_122581291_122615180_122615300_122621480_122621718_122629247_122629329_122663236_122663570_122736954_122737069_122885998
transcript_183747.known	chr7	-	4308	28	FSM	ENSG00000081803.17	ENST00000412584.6	4308	28	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_21	9.19070921107121	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTCGTATCCTTGTTAA	-122884709	True	NA	NA	False	NA	NA	NA	122886458	122319745	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_122320339_122325476_122325582_122345573_122345682_122360787_122360821_122360929_122361014_122379367_122379443_122386294_122386310_122387025_122387174_122388582_122388739_122393440_122393583_122407539_122407697_122416060_122416165_122438340_122438465_122441511_122441576_122451373_122451476_122471374_122471563_122474380_122474518_122490080_122490282_122491311_122491421_122513248_122513316_122554549_122554690_122581178_122581291_122615180_122615300_122621480_122621718_122629247_122629329_122663236_122663570_122736954_122737069_122885998
transcript_183757.known	chr7	-	778	6	FSM	ENSG00000128609.16	ENST00000466896.5	778	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	1173.67361732298	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCCTACAGATTTTCAA	-123542308	True	NA	NA	False	ATTAAA	-4	NA	123557801	123541857	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_123542221_123545610_123545677_123546657_123546818_123550469_123550587_123557403_123557449_123557774
transcript_183758.known	chr7	-	5268	6	FSM	ENSG00000128609.16	ENST00000676614.1	5268	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	1117.99635062016	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGGTATTATGATCCAAAT	-123542311	True	NA	NA	False	AATAGA	-33	NA	123557804	123537419	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_123542221_123545610_123545677_123550469_123550587_123551367_123551577_123557403_123557449_123557774
transcript_183759.known	chr7	-	5496	5	FSM	ENSG00000128609.16	ENST00000355749.7	5496	5	0	0	0	0	multi-exon	FALSE	canonical	3	1590	junction_4	435.947244514746	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACATTTGTGTGTATGTGC	-123542325	True	NA	NA	False	TATAAA	-18	NA	123557818	123536996	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_123542221_123545610_123545677_123550469_123550587_123557403_123557449_123557774
transcript_183762.known	chr7	-	1504	4	FSM	ENSG00000128609.16	ENST00000611607.4	1504	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	1159.00685454784	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCCTGTCATTCCTAAA	NA	False	NA	-35	True	AATAAA	-24	NA	123557904	123541029	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_123542221_123545610_123545677_123550469_123550587_123557774
transcript_183763.known	chr7	-	1432	4	FSM	ENSG00000128609.16	ENST00000618945.4	1432	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	1038.58921405701	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCCTGTCATTCCTAAA	NA	False	NA	-35	True	AATAAA	-24	NA	123557904	123541029	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_123542221_123545610_123545677_123557403_123557449_123557774
transcript_183765.known	chr7	-	4363	11	FSM	ENSG00000106299.8	ENST00000223023.5	4363	11	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_7	38.2721831099299	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATAATGTGTTTCATGT	-123740890	True	NA	-16	True	AATAAA	-22	NA	123749003	123681942	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_123684581_123689041_123689151_123692346_123692868_123694714_123694869_123695822_123695866_123696578_123696748_123704633_123704658_123706276_123706374_123706739_123706827_123709088_123709224_123748617
transcript_183766.nic	chr7	-	1357	6	ISM	ENSG00000106299.8	ENST00000223023.5	4363	11	-525	14702	-525	-14702	5prime_fragment	FALSE	canonical	3	159	junction_2	39.9969998874916	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGGGAAAAGCTAAAA	-123749498	False	NA	-8	True	AATAGA	-45	NA	123749528	123696644	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_123696748_123704633_123704658_123706276_123706374_123706739_123706827_123709088_123709224_123748617
transcript_183767.nic	chr7	-	1181	4	ISM	ENSG00000106299.8	ENST00000223023.5	4363	11	-525	24383	-525	-24383	5prime_fragment	FALSE	canonical	3	202	junction_1	25.3113940087595	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCGAAAAGCAGTTACAGA	-123749498	False	NA	NA	False	AATGAA	-16	NA	123749528	123706325	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_123706374_123706739_123706827_123709088_123709224_123748617
transcript_183768.known	chr7	+	2099	1	FSM	ENSG00000272686.1	ENST00000607957.1	2099	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAGTGAAGAACTTGATAG	123749030	False	NA	NA	False	AATATA	-25	NA	123749067	123751166	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_123749100_123751200
transcript_183769.known	chr7	-	5298	2	FSM	ENSG00000170775.3	ENST00000303921.3	5298	2	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAACAACAAAAAAAAAAAA	-124765782	False	NA	NA	False	NA	NA	NA	124765792	124743884	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_124747344_124763953
transcript_183774.known	chr7	-	2877	19	FSM	ENSG00000128513.16	ENST00000668382.1	2877	19	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_18	15.2990760634445	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCTAATAAAAGTGGTCAG	-124929726	True	NA	-46	True	NA	NA	NA	124929944	124823548	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_124824075_124825251_124825358_124827213_124827306_124829253_124829343_124835278_124835415_124840972_124841179_124842806_124842964_124846941_124846999_124851871_124851952_124852971_124853139_124858956_124859113_124863349_124863641_124870910_124871042_124892265_124892381_124897164_124897213_124898260_124898375_124915573_124915647_124928814_124928997_124929793
transcript_183775.known	chr7	-	3924	19	FSM	ENSG00000128513.16	ENST00000357628.8	3924	19	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_18	12.051970793194	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTTGGTTTATTGTGG	-124927988	True	NA	-2	True	AATAAA	-18	NA	124929825	124822385	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_124824075_124825251_124825358_124827213_124827306_124829253_124829343_124835278_124835415_124840972_124841179_124842806_124842964_124846941_124846999_124851871_124851952_124852971_124853139_124858956_124859113_124863349_124863641_124870910_124871042_124892265_124892381_124897164_124897213_124898260_124898375_124915573_124915647_124928814_124929000_124929793
transcript_183784.known	chr7	-	3950	18	FSM	ENSG00000128513.16	ENST00000393329.5	3950	18	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_12	17.1035923703858	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTTTGGTTTATTGTG	-124929765	False	NA	-3	True	AATAAA	-17	NA	124929983	124822386	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_124824075_124825251_124825358_124827213_124827306_124829253_124829343_124835278_124835415_124840972_124841179_124842806_124842964_124846941_124846999_124851871_124851952_124852971_124853139_124858956_124859113_124863349_124863641_124892265_124892381_124897164_124897213_124898260_124898375_124915573_124915647_124928814_124929000_124929793
transcript_183790.known	chr7	-	2602	19	FSM	ENSG00000128513.16	ENST00000430927.6	2602	19	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	20.3218698711937	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTTGGTTTATTGTGG	-124928000	True	NA	-2	True	AATAAA	-18	NA	124929837	124822385	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_124822552_124823796_124824075_124825251_124825358_124827213_124827306_124835278_124835415_124840972_124841179_124842806_124842964_124846941_124846999_124851871_124851952_124852971_124853139_124858956_124859113_124863349_124863641_124870910_124871042_124892265_124892381_124897164_124897213_124898260_124898375_124915573_124915647_124928814_124929000_124929793
transcript_183791.known	chr7	+	667	3	FSM	ENSG00000224897.9	ENST00000659682.1	667	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAATGGTTTCCATGAACT	124929801	True	NA	NA	False	AATAAA	-39	NA	124929882	124992289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_124930017_124940279_124940386_124991862
transcript_183794.known	chr7	-	1918	5	FSM	ENSG00000219445.2	ENST00000420224.1	1918	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.34477204006491	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTACCACCTTGTGAAGAA	-125262803	True	NA	NA	False	TTTAAA	-31	NA	125264291	125229578	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_125230842_125246343_125246531_125248300_125248442_125249979_125250058_125264042
transcript_183834.nnic	chr7	+	477	4	NNC	ENSG00000197462.3	novel	837	5	NA	NA	6121	145255	at_least_one_novel_splicesite	FALSE	canonical	3	144	junction_2	87.5709236371678	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTACTCTGTAAGGGCAT	125917505	True	NA	20	True	ATTAAA	-16	NA	125923991	126079087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_125924046_125924211_125924388_126078378_126078408_126078869
transcript_183838.nnic	chr7	+	1471	4	NNC	ENSG00000197462.3	novel	837	5	NA	NA	6121	146249	at_least_one_novel_splicesite	FALSE	canonical	3	144	junction_2	87.5709236371678	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATTTTTTGACTATTTC	125917505	True	NA	NA	False	AATAAA	-22	NA	125923991	126080081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_125924046_125924211_125924388_126078378_126078408_126078869
transcript_183840.nnic	chr7	+	2217	4	NNC	ENSG00000197462.3	novel	837	5	NA	NA	6121	146995	at_least_one_novel_splicesite	FALSE	canonical	3	144	junction_2	87.5709236371678	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTATAAGAACACATTTC	125917505	True	NA	NA	False	AAAACA	-10	NA	125923991	126080827	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_125924046_125924211_125924388_126078378_126078408_126078869
transcript_18385.nic	chr1	-	1132	7	ISM	ENSG00000117139.18	ENST00000367264.7	6520	28	-50	36624	-44	15	5prime_fragment	FALSE	canonical	3	51	junction_2	435.153995730247	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTGAAAATGGTAAGAAAAT	-202808475	False	NA	-5	True	NA	NA	NA	202808531	202764058	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_202764146_202766396_202766505_202766925_202767061_202773117_202773289_202774612_202774736_202777016_202777095_202808101
transcript_183852.nnic	chr7	+	609	3	NNC	ENSG00000197462.3	novel	837	5	NA	NA	6121	-4708	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_2	126	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTACCATTAACTGTCAA	125917505	True	NA	NA	False	AATAAA	-22	NA	125923991	125929124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_125924046_125924211_125924388_125928745
transcript_183869.nnic	chr7	+	1995	3	NNC	ENSG00000197462.3	novel	837	5	NA	NA	6121	108114	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_2	164.5	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTATTTTTGGAAATG	125917505	True	NA	9	True	AATAAA	-14	NA	125923991	126041946	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_125924046_125924211_125924388_126040181
transcript_18387.nic	chr1	-	1024	6	ISM	ENSG00000117139.18	ENST00000648473.1	6703	27	-50	36614	-44	15	5prime_fragment	FALSE	canonical	3	927	junction_4	38.239246854508	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTGAAAATGGTAAGAAAAT	-202808475	False	NA	-5	True	NA	NA	NA	202808531	202764058	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_202764146_202766925_202767061_202773117_202773289_202774612_202774736_202777016_202777095_202808101
transcript_183884.nnic	chr7	+	614	2	NNC	ENSG00000197462.3	novel	837	5	NA	NA	6121	-9061	at_least_one_novel_splicesite	FALSE	canonical	3	341	junction_1	0	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTAGAAAATATTTTGGAG	125917505	True	NA	NA	False	AATGAA	-15	NA	125923991	125924771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_125924046_125924211
transcript_183885.nnic	chr7	+	703	2	NNC	ENSG00000197462.3	novel	837	5	NA	NA	6121	-8972	at_least_one_novel_splicesite	FALSE	canonical	3	341	junction_1	0	350	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAATGCTTTACCAGGAG	125917505	True	NA	NA	False	ATTAAA	-26	NA	125923991	125924860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_125924046_125924211
transcript_183887.known	chr7	+	1032	6	FSM	ENSG00000004059.11	ENST00000000233.10	1032	6	0	0	0	0	multi-exon	FALSE	canonical	3	1344	junction_4	86.751599408887	2037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGTGTTGTCTGTAGCCT	127571120	True	NA	22	True	AATAAA	-17	NA	127588410	127591700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_127588566_127589082_127589164_127589484_127589595_127590065_127590138_127590962_127591089_127591212
transcript_183889.known	chr7	+	566	5	FSM	ENSG00000004059.11	ENST00000489673.1	566	5	0	0	0	0	multi-exon	FALSE	canonical	3	1344	junction_4	93.9078670825826	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATCCTGCCTCTTGAGGG	127571122	True	NA	NA	False	NA	NA	NA	127588412	127591112	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_127588566_127589082_127589164_127589484_127589595_127590065_127590138_127590962
transcript_183890.known	chr7	+	1509	5	FSM	ENSG00000004059.11	ENST00000463733.5	1509	5	0	0	0	0	multi-exon	FALSE	canonical	3	1344	junction_3	96.2366873910361	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGCTGTGGTTTGTAC	127571095	True	NA	3	True	NA	NA	NA	127588385	127591681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_127588566_127589082_127589164_127589484_127590138_127590962_127591089_127591212
transcript_183896.known	chr7	-	4128	2	FSM	ENSG00000179562.3	ENST00000321407.3	4128	2	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	0	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTGGTTCCTTAATAG	-127583805	True	NA	-15	True	ATTAAA	-15	NA	127585596	127580627	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_127583310_127584150
transcript_18390.known	chr1	-	3779	4	FSM	ENSG00000117139.18	ENST00000650368.1	3779	4	0	0	0	0	multi-exon	FALSE	canonical	3	927	junction_2	25.5907969568923	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACAGGGCATGATTTTCTT	-202785444	True	NA	NA	False	AATAAA	-25	NA	202808487	202770096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_202773289_202774612_202774736_202777016_202777095_202808101
transcript_183900.known	chr7	+	3448	24	FSM	ENSG00000197157.11	ENST00000354725.8	3448	24	0	0	0	0	multi-exon	FALSE	canonical	3	1220	junction_16	123.55397250183	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTATTGATCACAGTGT	127638562	True	NA	25	True	AATAAA	-20	NA	127652193	128092593	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_127652452_127686612_127686763_127694827_127694949_127698874_127698954_127701162_127701324_127702434_127702527_127703164_127703324_127704838_127704946_127707556_127707648_127721286_127721401_127807483_127807574_127844323_127844425_127887901_127888013_127904746_127904820_127929187_127929330_127990946_127991057_128074501_128074691_128081359_128081502_128084723_128084848_128085710_128085781_128086937_128087052_128089488_128089693_128091836_128091882_128091992
transcript_183911.known	chr7	+	793	2	FSM	ENSG00000197157.11	ENST00000463020.1	793	2	0	0	0	0	multi-exon	FALSE	canonical	3	1475	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGAAGGATATATAGTGAAA	127638562	True	NA	NA	False	NA	NA	NA	127652193	127687147	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_127652452_127686612
transcript_183912.known	chr7	-	561	3	FSM	ENSG00000128594.8	ENST00000476782.5	561	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCCACCTCCACCACCTGG	-128032095	False	NA	NA	False	NA	NA	NA	128032107	128030356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_128030741_128030912_128030997_128032014
transcript_183917.known	chr7	-	15507	19	FSM	ENSG00000106344.8	ENST00000223073.6	15507	19	0	0	0	0	multi-exon	TRUE	canonical	3	173	junction_12	25.9277248053169	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATAGCAGCATGATTTA	-128338111	True	NA	NA	False	AATAAA	-18	NA	128343908	128297684	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_128310932_128313174_128313275_128314763_128315021_128317658_128317734_128317956_128318107_128321265_128321425_128323526_128323592_128324558_128324695_128325817_128325892_128330818_128330929_128333289_128333363_128335542_128335680_128335846_128336043_128337130_128337203_128338249_128338343_128338725_128338802_128339226_128339322_128339632_128339792_128343675
transcript_183929.known	chr7	-	728	6	FSM	ENSG00000106344.8	ENST00000459726.1	728	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	90.5065743468396	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAGGCATGAACATGAAA	-128338111	True	NA	NA	False	NA	NA	NA	128343908	128338279	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_128338343_128338725_128338802_128339226_128339322_128339632_128339792_128341117_128341220_128343675
transcript_183933.known	chr7	-	2580	16	FSM	ENSG00000106348.18	ENST00000354269.9	2580	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_15	105.756954066072	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGTCTGTATGCCCTGT	-128409016	True	NA	-3	True	AATAAA	-26	NA	128409982	128392277	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_128393029_128394277_128394362_128394455_128394600_128394888_128395034_128395130_128395275_128396599_128396696_128396931_128397023_128398413_128398614_128400094_128400183_128400332_128400540_128400816_128400892_128401014_128401117_128403705_128403755_128405766_128405866_128409288_128409367_128409755
transcript_183934.nic	chr7	-	2705	16	NIC	ENSG00000106348.18	novel	2611	17	NA	NA	-26	0	intron_retention	FALSE	canonical	1	15	junction_15	103.880615237985	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGGTCTCAACGCCTCC	-128409046	True	NA	-26	True	AATAAA	-3	NA	128410012	128392300	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_128393029_128394277_128394362_128394455_128394600_128394888_128395034_128395130_128395275_128396599_128396696_128396931_128397023_128398413_128398614_128400094_128400183_128400332_128400540_128400816_128400892_128401014_128401117_128403705_128403755_128405766_128405866_128409288_128409485_128409755
transcript_183937.known	chr7	-	2479	15	FSM	ENSG00000106348.18	ENST00000348127.10	2479	15	0	0	0	0	multi-exon	FALSE	canonical	1	31	junction_14	86.4446266079492	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGGTCTCAACGCCTCC	-128409016	True	NA	-26	True	AATAAA	-3	NA	128409982	128392300	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_128393029_128394277_128394362_128394455_128394600_128394888_128395034_128395130_128395275_128396599_128396696_128396931_128397023_128398413_128398614_128400094_128400183_128400332_128400540_128400816_128400892_128401014_128401117_128403705_128403755_128405766_128405866_128409755
transcript_18394.known	chr1	+	748	2	FSM	ENSG00000228288.8	ENST00000417262.5	748	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTCTTTTTTCCGCGG	202809860	True	NA	23	True	NA	NA	NA	202810961	202811913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_202811371_202811574
transcript_183941.known	chr7	-	1765	14	FSM	ENSG00000106348.18	ENST00000480861.5	1765	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	79.1751111451829	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCACTCGGCATCCCCT	-128402931	True	NA	NA	False	NA	NA	NA	128405942	128392849	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_128393029_128394277_128394362_128394455_128394600_128394888_128395034_128395130_128395275_128396599_128396696_128396931_128397023_128398413_128398614_128400094_128400183_128400332_128400540_128400831_128400892_128401014_128401117_128403705_128403755_128405766
transcript_183944.known	chr7	-	2295	14	FSM	ENSG00000106348.18	ENST00000469328.5	2295	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	104.969141703927	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTCTGTATGCCCTGTC	-128404899	False	NA	-2	True	AATAAA	-27	NA	128405865	128392276	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_128393029_128394277_128394362_128394455_128394600_128394888_128395034_128395130_128395275_128396599_128396696_128396931_128397023_128398413_128398614_128400094_128400205_128400332_128400537_128400816_128400892_128401014_128401117_128403705_128403755_128405766
transcript_183946.known	chr7	-	2283	13	FSM	ENSG00000106348.18	ENST00000496200.5	2283	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_10	79.9181438862429	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGTCTGTATGCCCTGT	-128402937	True	NA	-3	True	AATAAA	-26	NA	128405948	128392277	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_128393029_128394277_128394362_128394455_128394600_128394888_128395034_128395130_128395275_128396599_128396696_128396931_128397023_128398413_128398614_128400094_128400183_128400332_128400540_128401014_128401117_128403705_128403755_128405766
transcript_18395.known	chr1	+	634	2	FSM	ENSG00000228288.8	ENST00000425295.2	705	2	69	2	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTCTTTTTTCCGCGG	202809860	True	NA	23	True	NA	NA	NA	202810961	202811913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_202811371_202811688
transcript_183958.known	chr7	+	5841	9	FSM	ENSG00000165055.16	ENST00000262432.13	5841	9	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_6	129.181981618955	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGCTCTGAATGGTATC	128471288	True	NA	6	True	AATAAA	-18	NA	128476747	128506602	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_128476876_128477081_128477174_128479157_128479514_128480646_128480697_128488100_128488162_128493803_128493944_128498035_128498143_128500902_128500969_128501761
transcript_18396.nnic	chr1	-	2488	4	NNC	ENSG00000214796.9	novel	1982	3	NA	NA	2	2176	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	77.8074546557076	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGCCTGACCTTAACT	-202861729	True	NA	1	True	AATAAA	-20	NA	202861753	202849651	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_202850200_202851867_202853281_202858881_202859103_202861447
transcript_183962.nic	chr7	+	1308	9	NIC	ENSG00000165055.16	novel	5841	9	NA	NA	7	98	combination_of_known_junctions	TRUE	canonical	3	13	junction_8	152.546714156681	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAATTTTAAGCACTGTTC	128471276	True	NA	11	True	AATAAA	-23	NA	128476735	128502930	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_128476876_128479157_128479514_128480646_128480697_128488100_128488162_128493803_128493944_128498035_128498143_128500902_128500969_128501761_128501833_128502613
transcript_183965.known	chr7	+	5743	8	FSM	ENSG00000165055.16	ENST00000480046.5	5743	8	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_5	142.106312603039	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGCTCTGAATGGTATC	128471294	True	NA	6	True	AATAAA	-18	NA	128476753	128506602	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_128476876_128479157_128479514_128480646_128480697_128488100_128488162_128493803_128493944_128498035_128498143_128500902_128500969_128501761
transcript_18398.known	chr1	-	1835	3	FSM	ENSG00000214796.9	ENST00000443294.6	1982	3	147	0	12	0	multi-exon	FALSE	canonical	3	60	junction_1	64.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGTTCAAGCGATTCTCC	-202858680	True	NA	NA	False	NA	NA	NA	202861608	202851827	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_202853281_202858881_202859103_202861447
transcript_183983.known	chr7	+	1364	2	FSM	ENSG00000135245.10	ENST00000257696.5	1364	2	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	0	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTCATGTTGACTTC	128449353	True	NA	14	True	AATAAA	-19	NA	128455877	128458418	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_128456024_128457200
transcript_183985.known	chr7	+	785	2	FSM	ENSG00000135245.10	ENST00000435296.2	785	2	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAGCCTGTTTAATGCA	128449324	True	NA	NA	False	AAAAAG	-5	NA	128455848	128457924	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_128455910_128457200
transcript_183993.known	chr7	+	2572	8	FSM	ENSG00000128595.17	ENST00000479257.5	2572	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	987.885001156614	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACTAAAGGAAAAATACA	128703700	True	NA	NA	False	NA	NA	NA	128739403	128769936	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_128739433_128747552_128748368_128748572_128748805_128754261_128754456_128758870_128759038_128759791_128759853_128767455_128767656_128769062
transcript_183995.known	chr7	+	4225	8	FSM	ENSG00000128595.17	ENST00000542996.6	4225	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	1075.86011153488	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGTATGTATGACCTTCA	128703588	True	NA	17	True	AATAAA	-18	NA	128739291	128771477	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_128739433_128747552_128748368_128748572_128748805_128754528_128754723_128758870_128759038_128759791_128759853_128767455_128767656_128769062
transcript_18400.known	chr1	-	631	3	FSM	ENSG00000214796.9	ENST00000430114.2	1112	3	0	481	0	-481	multi-exon	FALSE	canonical	3	92	junction_1	48.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGATGCCGTGCATCATC	-202858692	True	NA	NA	False	AAAAAG	-14	NA	202861620	202857927	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_202858165_202858881_202859103_202861447
transcript_184002.known	chr7	+	5266	7	FSM	ENSG00000128595.17	ENST00000249364.9	5266	7	0	0	0	0	multi-exon	FALSE	canonical	3	1763	junction_2	283.868171672854	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTTCTTTGGAGCAACT	128703655	True	NA	21	True	AATAAA	-14	NA	128739358	128773400	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_128739433_128748572_128748805_128754261_128754456_128758870_128759038_128759791_128759853_128767455_128767656_128769062
transcript_184004.known	chr7	+	2438	7	FSM	ENSG00000128595.17	ENST00000449187.6	2438	7	0	0	0	0	multi-exon	FALSE	canonical	3	442	junction_3	897.549147524648	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGGAAA	128703659	True	NA	27	True	NA	NA	NA	128739362	128770576	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_128739433_128748572_128748805_128754528_128754723_128758870_128759038_128759791_128759853_128767455_128767656_128769062
transcript_184011.known	chr7	+	3210	6	FSM	ENSG00000128595.17	ENST00000535011.6	3210	6	0	0	0	0	multi-exon	FALSE	canonical	2	91	junction_5	828.736484052681	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGTATGTATGACCTTCA	128703588	True	NA	17	True	AATAAA	-18	NA	128739291	128771477	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_128739433_128748572_128748805_128754261_128754456_128758870_128759038_128759791_128759853_128769062
transcript_184031.nic	chr7	+	343	3	ISM	ENSG00000128596.17	ENST00000378685.8	1689	10	-59	27712	-25	-107	5prime_fragment	FALSE	canonical	3	68	junction_1	6.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAACAAGTGCA	128791179	False	NA	39	True	NA	NA	NA	128791384	128794415	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_128791552_128792319_128792428_128794347
transcript_184032.known	chr7	+	711	3	FSM	ENSG00000128524.5	ENST00000492758.1	711	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	6	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGATGGGTTGGGTGCTGG	128844385	True	NA	36	True	ATTAAA	-20	NA	128862903	128865844	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_128863063_128865119_128865204_128865376
transcript_184034.known	chr7	+	678	2	FSM	ENSG00000128524.5	ENST00000249289.5	678	2	0	0	0	0	multi-exon	FALSE	canonical	3	1883	junction_1	0	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGGTTGGGTGCTGGAAA	128844337	True	NA	39	True	ATTAAA	-23	NA	128862855	128865847	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_128863063_128865376
transcript_184037.known	chr7	-	2774	21	FSM	ENSG00000135253.16	ENST00000612224.1	2774	21	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_10	1.82756668824971	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-128910542	True	NA	NA	False	NA	NA	NA	128910719	128889946	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_128890514_128890904_128891097_128891184_128891279_128891450_128891534_128891645_128891820_128892513_128892608_128892687_128892795_128892868_128893022_128893237_128893320_128893390_128893477_128893805_128893900_128893975_128894056_128894199_128894294_128902776_128902860_128903726_128903821_128904055_128904139_128906278_128906364_128907100_128907178_128907263_128907454_128908425_128908569_128910600
transcript_184044.nnic	chr7	-	3582	24	NNC	ENSG00000064419.14	novel	3585	24	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	8.93179363947396	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGACTAAACAGAAACCA	-129050585	True	NA	NA	False	AGTAAA	-17	NA	129055126	128955087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_128955386_128957223_128957316_128967279_128967393_128970147_128970316_128972425_128972583_128974867_128974963_128975818_128975936_128978982_128979124_128979970_128980032_128982247_128982325_128984167_128984260_128986728_128986921_128989960_128990101_128991998_128992091_128993806_128993915_128997388_128997536_129000428_129000568_129001058_129001235_129005015_129005160_129014978_129015136_129016982_129017057_129017956_129018158_129019870_129019996_129054650
transcript_184046.known	chr7	-	3585	24	FSM	ENSG00000064419.14	ENST00000482320.5	3585	24	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_22	8.53060763021267	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGACTAAACAGAAACCA	-129050552	True	NA	NA	False	AGTAAA	-17	NA	129055093	128955087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_128955386_128957223_128957316_128967279_128967393_128970147_128970316_128972425_128972583_128974867_128974963_128975818_128975936_128978982_128979124_128979970_128980032_128982247_128982325_128984167_128984260_128986728_128986921_128989960_128990101_128991998_128992091_128993806_128993915_128997388_128997536_129000428_129000568_129001058_129001235_129005015_129005160_129014978_129015136_129016982_129017057_129017956_129018158_129041556_129041718_129054650
transcript_184052.known	chr7	-	4345	23	FSM	ENSG00000064419.14	ENST00000265388.10	4345	23	0	0	0	0	multi-exon	TRUE	canonical	2	15	junction_17	6.42068583654194	1193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTTTCTTTGTTTTTA	-129050570	True	NA	-6	True	AATAAA	-15	NA	129055111	128954184	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_128955386_128957223_128957316_128967279_128967393_128970147_128970316_128972425_128972583_128974867_128974963_128975818_128975936_128978982_128979124_128979970_128980032_128982247_128982325_128984167_128984260_128986728_128986921_128989960_128990101_128991998_128992091_128993806_128993915_128997388_128997536_129000428_129000568_129001058_129001235_129005015_129005160_129014978_129015136_129016982_129017057_129017956_129018158_129054650
transcript_184065.known	chr7	-	3283	22	FSM	ENSG00000064419.14	ENST00000471234.5	3283	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	8.11761612851811	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGACTAAACAGAAACCA	-129055132	False	NA	NA	False	AGTAAA	-17	NA	129055144	128955087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_128955386_128957223_128957316_128967279_128967393_128970147_128970316_128972425_128972583_128974867_128974963_128975818_128975936_128978982_128979124_128979970_128980032_128982247_128982325_128984167_128984260_128989960_128990101_128991998_128992091_128993806_128993915_128997388_128997536_129000428_129000568_129001058_129001235_129005015_129005160_129014978_129015136_129016982_129017057_129017956_129018158_129054650
transcript_18408.known	chr1	-	3119	2	FSM	ENSG00000183155.5	ENST00000367262.4	3119	2	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGAAGTAGGGGATGGGG	-202887027	True	NA	NA	False	NA	NA	NA	202889149	202878281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_202881224_202888972
transcript_184096.known	chr7	+	2951	8	FSM	ENSG00000158457.6	ENST00000486685.3	2951	8	0	0	0	0	multi-exon	TRUE	canonical	3	373	junction_3	22.7470563244691	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGGCCTTTTATTCTGG	129142448	True	NA	NA	False	AATAAA	-25	NA	129144706	129169699	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_129145083_129161678_129161737_129162393_129162522_129162832_129162908_129164473_129164570_129166777_129166907_129167398_129167561_129167772
transcript_1841.known	chr1	-	4955	30	FSM	ENSG00000131697.18	ENST00000378156.9	4955	30	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	9.83562889292706	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTTGGCAGTTTTCTTG	-5991305	True	NA	-3	True	ACTAAA	-13	NA	5992425	5862810	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_5863406_5863889_5864034_5864337_5864518_5865101_5865274_5866372_5866459_5867029_5867116_5867739_5867897_5873251_5873336_5874470_5874658_5874873_5875101_5877092_5877299_5880113_5880240_5887285_5887467_5890867_5891029_5904616_5904805_5905291_5905484_5905631_5905784_5907114_5907223_5909151_5909214_5927648_5927788_5933146_5933330_5947103_5947231_5948069_5948252_5952699_5952837_5961793_5961950_5967298_5967364_5969086_5969260_5978269_5978414_5986154_5986328_5992243
transcript_184102.known	chr7	+	3977	12	FSM	ENSG00000128602.11	ENST00000249373.8	3977	12	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_2	13.8133963005255	236	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGTGTGTTTTTCCTT	129187085	True	NA	NA	False	AATAAA	-16	NA	129188632	129213545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_129189483_129203383_129203590_129205202_129205413_129205609_129205783_129206149_129206370_129206463_129206588_129208758_129208852_129209288_129209398_129210362_129210549_129210964_129211114_129211635_129211771_129212023
transcript_184119.known	chr7	+	5026	17	FSM	ENSG00000158467.17	ENST00000446544.6	5026	17	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	19.3289775984143	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTAAGGGTATTTCTTGT	129222036	True	NA	4	True	AATAAA	-17	NA	129225049	129430211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_129225440_129379640_129379750_129389055_129389200_129389633_129389735_129397221_129397325_129400289_129400385_129403378_129403486_129405096_129405214_129405835_129405900_129406377_129406467_129409475_129409547_129413593_129413689_129422839_129422939_129424873_129424943_129425062_129425142_129426442_129426564_129427038
transcript_184125.known	chr7	+	5116	21	FSM	ENSG00000128578.10	ENST00000249344.7	5116	21	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_20	6.96042383766966	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTGTTTAAATTCTTCA	129433617	True	NA	10	True	AATAAA	-25	NA	129434431	129488399	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_129434602_129440021_129440092_129444023_129444099_129451612_129451748_129453226_129453348_129454141_129454211_129454420_129454528_129455243_129455372_129456438_129456643_129458214_129458451_129458711_129458778_129459516_129459581_129460300_129460373_129462965_129463041_129464043_129464142_129464611_129464739_129467349_129467451_129470648_129470716_129480784_129480890_129482841_129483047_129485578
transcript_184129.known	chr7	+	2866	20	FSM	ENSG00000128578.10	ENST00000435494.2	2866	20	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_4	6.07478782274844	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCGAGTTGTCCCAAAAT	129433631	True	NA	6	True	AATAAA	-15	NA	129434445	129483631	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_129434602_129440021_129440092_129444023_129444099_129451612_129451748_129453226_129453348_129454141_129454211_129454420_129454528_129455243_129455372_129456438_129456643_129458214_129458451_129458711_129458778_129459516_129459581_129460300_129460373_129462965_129463041_129464043_129464142_129464611_129464739_129467349_129467451_129470648_129470716_129480784_129480890_129482841
transcript_184136.known	chr7	+	969	2	FSM	ENSG00000240204.3	ENST00000462322.3	969	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTCTCAGCAGTCTGA	129502504	True	NA	NA	False	AATAAA	-17	NA	129502530	129512918	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_129502828_129512246
transcript_184139.known	chr7	+	2424	11	FSM	ENSG00000106459.15	ENST00000223190.8	2424	11	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	13.4922199804183	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGAATTGCTCGTATAT	129610629	True	NA	15	True	ATTAAA	-24	NA	129611755	129756015	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_129611825_129657342_129657575_129671428_129671544_129677631_129677759_129690405_129690547_129709074_129709234_129710373_129710572_129711474_129711577_129717218_129717377_129727240_129727366_129755017
transcript_184143.known	chr7	+	3518	11	FSM	ENSG00000106459.15	ENST00000393232.6	3518	11	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	22.31793001154	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAAGTGGAATTGTTCAT	129610593	True	NA	14	True	AATAAA	-19	NA	129611719	129757076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_129611825_129657345_129657575_129671428_129671544_129677631_129677759_129690405_129690547_129709074_129709234_129710373_129710572_129711474_129711577_129717218_129717377_129727240_129727366_129755017
transcript_184146.nic	chr7	+	2624	10	ISM	ENSG00000106459.15	ENST00000223190.8	2424	11	-69	27521	-33	19397	5prime_fragment	FALSE	canonical	3	74	junction_1	12.2424075740794	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATCCTGGAATGAGGATA	129610560	True	NA	NA	False	NA	NA	NA	129611686	129728494	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_129611825_129657342_129657575_129671428_129671544_129677631_129677759_129690405_129690547_129709074_129709234_129710373_129710572_129711474_129711577_129717218_129717377_129727240
transcript_18415.known	chr1	-	3311	12	FSM	ENSG00000117153.16	ENST00000367261.8	3311	12	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_5	28.1782989004947	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCGAGAGTTTGTGGCTAA	-202925377	True	NA	-22	True	ATTAAA	-17	NA	202927234	202891119	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_202892660_202893238_202893426_202894183_202894283_202894590_202894750_202895521_202895718_202896853_202896961_202909009_202909125_202911053_202911204_202918170_202918389_202919754_202919909_202924967_202925208_202927088
transcript_184153.known	chr7	-	5162	7	FSM	ENSG00000186591.13	ENST00000355621.8	5162	7	0	0	0	0	multi-exon	FALSE	canonical	3	471	junction_3	36.4539283053128	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTGGACCTTGATCAATA	-129944247	True	NA	0	True	AATAAA	-21	NA	129952960	129830731	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_129835062_129839206_129839336_129857510_129857564_129858901_129858942_129879567_129879643_129880894_129880972_129952502
transcript_184156.nic	chr7	-	2696	7	NIC	ENSG00000186591.13	novel	5162	7	NA	NA	-29	1770	combination_of_known_junctions	FALSE	canonical	3	71	junction_2	174.093285976864	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAAGAATTTACTTACTT	NA	False	NA	NA	False	AATAAA	-3	NA	129952989	129833166	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_129835062_129839206_129839276_129857510_129857564_129858901_129858942_129879567_129879643_129880894_129880972_129952502
transcript_184158.nic	chr7	-	843	6	ISM	ENSG00000186591.13	ENST00000355621.8	5162	7	-29	8493	-29	0	5prime_fragment	FALSE	canonical	3	471	junction_2	27.2073519475895	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAGCAGAAAATTAAAGGT	NA	False	NA	NA	False	NA	NA	NA	129952989	129839224	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_129839336_129857510_129857564_129858901_129858942_129879567_129879643_129880894_129880972_129952502
transcript_184160.known	chr7	-	535	5	FSM	ENSG00000186591.13	ENST00000473814.6	535	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	222.208657572112	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAAAAGCACCTGCTTTT	-129943918	False	NA	NA	False	NA	NA	NA	129952631	129834936	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_129835062_129839206_129839336_129879567_129879643_129880894_129880972_129952502
transcript_184162.nic	chr7	-	4182	5	ISM	ENSG00000186591.13	ENST00000472396.5	758	6	-46	14857	-29	2912	5prime_fragment	FALSE	canonical	3	471	junction_1	27.4089401473315	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAACACTAAATAACTAATA	NA	False	NA	NA	False	NA	NA	NA	129952989	129854060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_129857564_129858901_129858942_129879567_129879643_129880894_129880972_129952502
transcript_184166.known	chr7	-	1741	10	FSM	ENSG00000091732.17	ENST00000481503.5	1741	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	369.761317742629	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACAGTGTGTATTAATAA	-130048242	True	NA	-40	True	NA	NA	NA	130051389	130018325	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_130018733_130022318_130022526_130023510_130023724_130024262_130024378_130026157_130026313_130028901_130029030_130039463_130039548_130040950_130041102_130049032_130049145_130051220
transcript_184168.known	chr7	-	1889	10	FSM	ENSG00000091732.17	ENST00000358303.9	1889	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	287.088879428232	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCATTGTTGGAGAACTG	-130048227	True	NA	-6	True	AATAAA	-14	NA	130051374	130018291	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_130018733_130022318_130022526_130023510_130023724_130024262_130024507_130026157_130026313_130028901_130029030_130039463_130039548_130040950_130041102_130049032_130049145_130051220
transcript_184173.nic	chr7	-	1637	8	NIC	ENSG00000091732.17	novel	1889	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_7	289.611492048452	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCATTGTTGGAGAACTG	-130048238	True	NA	-6	True	AATAAA	-14	NA	130051385	130018291	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_130018733_130022318_130022526_130023510_130023724_130024262_130024507_130026157_130026313_130028901_130029030_130039463_130039548_130051220
transcript_184175.known	chr7	+	6398	10	FSM	ENSG00000128607.14	ENST00000335420.10	6398	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	8.33999733546454	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTCAAGTTCACCTTG	130069996	True	NA	16	True	AATAAA	-16	NA	130070533	130135705	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_130070810_130096920_130097008_130116444_130116667_130120748_130120904_130122053_130122203_130124450_130124536_130125864_130125932_130127403_130127452_130129436_130129577_130130536
transcript_18418.nic	chr1	-	3167	11	NIC	ENSG00000117153.16	novel	3311	12	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	55.787901914304	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGTTTGTGGCTAACCAA	-202925416	True	NA	-18	True	ATTAAA	-21	NA	202927273	202891115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_202892660_202894183_202894283_202894590_202894750_202895521_202895718_202896853_202896961_202909009_202909125_202911053_202911204_202918170_202918389_202919754_202919909_202924967_202925208_202927088
transcript_184183.known	chr7	-	3455	15	FSM	ENSG00000146842.17	ENST00000397622.7	3455	15	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_14	30.8263735480262	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATGAAATGTCTTTTTT	-130202108	True	NA	-4	True	ATTAAA	-31	NA	130205406	130164712	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_130166506_130170399_130170474_130173631_130173730_130173824_130173940_130175511_130175610_130178401_130178528_130181622_130181720_130184183_130184256_130185191_130185368_130192621_130192824_130201849_130202092_130202531_130202664_130203787_130203847_130203973_130204111_130205372
transcript_184186.known	chr7	-	1961	14	FSM	ENSG00000146842.17	ENST00000473456.5	1961	14	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	65.4724297185803	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTCAGTCTTTTTTTT	-130202105	True	NA	NA	False	NA	NA	NA	130205403	130166077	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_130166506_130170399_130170474_130173631_130173730_130173824_130173940_130175511_130175610_130181622_130181720_130184183_130184256_130185191_130185368_130192621_130192824_130201849_130202092_130202531_130202664_130203787_130203847_130203973_130204111_130205372
transcript_184194.known	chr7	-	2541	11	FSM	ENSG00000106477.20	ENST00000676243.1	2541	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	27.371700714424	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGTAAGATTTGCCTTAAC	-130440041	True	NA	NA	False	NA	NA	NA	130441059	130397573	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_130399040_130400038_130400255_130400697_130400822_130401880_130401949_130402647_130402800_130404563_130404709_130411121_130411192_130412178_130412241_130416918_130416967_130427954_130428019_130440933
transcript_184195.known	chr7	-	1700	11	FSM	ENSG00000106477.20	ENST00000675803.1	1700	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	27.8201365920443	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTTTGTTTTGTTTTT	-130439830	False	NA	NA	False	AAAAAG	-14	NA	130440848	130398594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_130399040_130400038_130400255_130400706_130400822_130401880_130401949_130402647_130402800_130404563_130404709_130411121_130411192_130412178_130412241_130416918_130416967_130427954_130428019_130440533
transcript_184197.known	chr7	-	2465	11	FSM	ENSG00000106477.20	ENST00000674630.1	2465	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	28.2630500831032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTATTTTCTCGCCACCAA	-130440028	True	NA	NA	False	NA	NA	NA	130441046	130397551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_130399040_130400038_130400255_130400706_130400822_130401880_130401949_130402647_130402800_130404639_130404709_130411121_130411192_130412178_130412241_130416918_130416967_130427954_130428019_130440933
transcript_184199.known	chr7	-	2589	10	FSM	ENSG00000106477.20	ENST00000675596.1	2589	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	25.7413535765044	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTTTGTATGAGAAATAA	NA	False	NA	-74	True	NA	NA	NA	130441237	130397478	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_130399040_130400706_130400822_130401880_130401949_130402647_130402800_130404563_130404709_130411121_130411192_130412178_130412241_130416918_130416967_130427954_130428019_130440933
transcript_184201.known	chr7	-	3161	3	FSM	ENSG00000106477.20	ENST00000489512.5	3161	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	44	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGAAATGAAGTGTAGACA	-130440038	True	NA	NA	False	AATAAA	-39	NA	130441056	130419033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_130422008_130427954_130428019_130440933
transcript_184202.known	chr7	-	1012	10	FSM	ENSG00000106477.20	ENST00000343969.10	1012	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	29.8804201137273	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTGAGCATTTCCCAAGT	-130439998	True	NA	-6	True	AATAAA	-21	NA	130441016	130398843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_130399040_130400697_130400822_130401880_130401949_130402647_130402800_130404563_130404709_130411121_130411192_130412178_130412241_130416918_130416967_130427954_130428019_130440933
transcript_184203.known	chr7	-	3134	24	FSM	ENSG00000158623.14	ENST00000425248.5	3134	24	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_7	15.3210136530609	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTATACTTGAAGTTGC	-130660597	True	NA	-33	True	AATAAA	-20	NA	130668748	130506237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_130506807_130507273_130507373_130507684_130507824_130508561_130508660_130547673_130547846_130548402_130548543_130549313_130549377_130550523_130550650_130551240_130551345_130552354_130552431_130554480_130554725_130555036_130555133_130561032_130561222_130563268_130563337_130564259_130564394_130610952_130611111_130612151_130612239_130613543_130613637_130616989_130617066_130652868_130652949_130662966_130663039_130666848_130666930_130667481_130667535_130668631
transcript_184208.known	chr7	+	2443	12	FSM	ENSG00000106484.16	ENST00000341441.9	2443	12	0	0	0	0	multi-exon	TRUE	canonical	3	809	junction_1	163.03586787844	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGACTCTGGCTTCCCCTC	NA	False	NA	16	True	AATAAA	-18	NA	130486170	130506292	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_130486396_130495367_130495523_130497155_130497236_130497935_130498014_130498138_130498276_130498418_130498478_130499874_130499916_130500461_130500533_130500788_130500891_130502643_130502721_130503932_130503997_130504938
transcript_184211.nic	chr7	+	2408	12	NIC	ENSG00000106484.16	novel	2443	12	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	173	junction_1	335.282587115914	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGACTCTGGCTTCCCCTC	130477316	True	NA	16	True	AATAAA	-18	NA	130486329	130506292	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_130486520_130495367_130495523_130497155_130497236_130497935_130498014_130498138_130498276_130498418_130498478_130499874_130499916_130500461_130500533_130500788_130500891_130502643_130502721_130503932_130503997_130504938
transcript_184214.known	chr7	+	2646	12	FSM	ENSG00000106484.16	ENST00000223215.10	2646	12	0	0	0	0	multi-exon	FALSE	canonical	3	479	junction_1	250.542617743539	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGACCAAGTAGAATAAAAAG	130491051	True	NA	NA	False	NA	NA	NA	130492084	130506465	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_130492340_130495367_130495523_130497155_130497236_130497935_130498014_130498138_130498276_130498418_130498478_130499874_130499916_130500461_130500533_130500788_130500891_130502643_130502721_130503932_130503997_130504938
transcript_184216.known	chr7	+	2411	12	FSM	ENSG00000106484.16	ENST00000437945.6	2411	12	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_4	372.520607894094	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGGACTCTGGCTTCC	130491079	True	NA	12	True	AATAAA	-14	NA	130492112	130506288	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_130492340_130495367_130495523_130497155_130497236_130497935_130498014_130498168_130498276_130498418_130498478_130499874_130499916_130500461_130500533_130500788_130500891_130502643_130502721_130503932_130503997_130504938
transcript_184218.known	chr7	+	2337	11	FSM	ENSG00000106484.16	ENST00000416162.7	2337	11	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_8	359.358609191431	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGACTCTGGCTTCCCCTC	NA	False	NA	16	True	AATAAA	-18	NA	130486174	130506292	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_130486396_130495367_130495523_130497155_130497236_130497935_130498014_130498138_130498276_130498418_130498478_130499874_130499916_130500461_130500533_130502643_130502721_130503932_130503997_130504938
transcript_184221.known	chr7	+	2473	11	FSM	ENSG00000106484.16	ENST00000427521.6	2473	11	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	458.229429434645	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGACCAAGTAGAATAAAAAG	130477322	True	NA	NA	False	NA	NA	NA	130486335	130506465	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_130486520_130495367_130495523_130497155_130497236_130497935_130498014_130498138_130498276_130498418_130498478_130499874_130499916_130500461_130500533_130502643_130502721_130503932_130503997_130504938
transcript_184222.nic	chr7	+	2431	11	NIC	ENSG00000106484.16	novel	2646	12	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	3	210	junction_8	402.484049373388	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGACTCTGGCTTCCCCTC	130483011	False	NA	16	True	AATAAA	-18	NA	130492024	130506292	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_130492340_130495367_130495523_130497155_130497236_130497935_130498014_130498138_130498276_130498418_130498478_130499874_130499916_130500461_130500533_130502643_130502721_130503932_130503997_130504938
transcript_184235.known	chr7	-	900	2	FSM	ENSG00000231721.7	ENST00000429901.2	900	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAGCATTCTCCTTAG	-131107545	False	NA	NA	False	NA	NA	NA	131107928	131051864	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_131052556_131107719
transcript_184236.known	chr7	+	2448	18	FSM	ENSG00000128585.18	ENST00000458153.5	2448	18	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	86.8920102960404	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATATATATATATATAT	131322094	True	NA	13	True	AATAAA	-25	NA	131327896	131487962	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_131327998_131375423_131375494_131387119_131387263_131388883_131388973_131397266_131397377_131399237_131399434_131411305_131411384_131414644_131414711_131429032_131429146_131437784_131437998_131443480_131443703_131445773_131445904_131463216_131463365_131464293_131464409_131466275_131466416_131470841_131470945_131478622_131478678_131487606
transcript_184243.nic	chr7	+	4089	16	ISM	ENSG00000128585.18	ENST00000494785.5	2386	17	-10	5985	-3	708	5prime_fragment	FALSE	canonical	3	323	junction_11	24.3142390837596	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCATGCCCTCACCCTAAG	131322070	True	NA	NA	False	AAAAAG	-10	NA	131327872	131472975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_131327998_131375423_131375494_131387119_131387263_131388883_131388973_131397266_131397377_131399240_131399434_131411305_131411384_131414644_131414711_131429032_131429146_131437784_131437998_131443480_131443703_131445773_131445904_131463216_131463365_131464293_131464409_131466275_131466416_131470841
transcript_18425.nnic	chr1	-	3047	10	NIC	ENSG00000117153.16	novel	3311	12	NA	NA	-39	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_4	56.8956159217133	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCGAGAGTTTGTGGCTAA	-202925416	True	NA	-22	True	ATTAAA	-17	NA	202927273	202891119	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_202892660_202893238_202893426_202894183_202894283_202894590_202894750_202909009_202909125_202911053_202911204_202918170_202918389_202919754_202919909_202924967_202925208_202927088
transcript_184251.known	chr7	+	406	1	FSM	ENSG00000233287.1	ENST00000427253.1	406	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTAGATGCTTCGTTTTG	NA	False	NA	NA	False	NA	NA	NA	131242589	131242995	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_131242600_131243000
transcript_184254.known	chr7	-	2043	6	FSM	ENSG00000236753.7	ENST00000429067.5	2043	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.15363949069005	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-131327618	True	NA	NA	False	NA	NA	NA	131327776	131309743	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_131310774_131311129_131311224_131323364_131323869_131324302_131324426_131326805_131326936_131327614
transcript_184255.known	chr7	-	1349	4	FSM	ENSG00000236753.7	ENST00000416220.6	1349	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	4.78423336480244	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCAGCACTTTGGGAGGC	-131327566	True	NA	NA	False	TTTAAA	-41	NA	131327724	131322842	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_131323869_131324302_131324426_131326805_131326896_131327614
transcript_184258.known	chr7	-	1497	4	FSM	ENSG00000236753.7	ENST00000444245.6	1497	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	4.78423336480244	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCCGTCTCTACTAAAA	-131327588	True	NA	NA	False	NA	NA	NA	131327746	131322767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_131323869_131324251_131324426_131326805_131326896_131327614
transcript_184260.known	chr7	-	1510	4	FSM	ENSG00000236753.7	ENST00000454515.6	1510	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	4.02768199119819	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCCGTCTCTACTAAAAAT	-131327559	True	NA	NA	False	NA	NA	NA	131327717	131322765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_131323869_131324251_131324426_131326805_131326936_131327614
transcript_184265.known	chr7	-	1440	4	FSM	ENSG00000236753.7	ENST00000669897.1	1440	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.73488351136175	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCGAGACCATCCTGGCT	-131327569	True	NA	NA	False	NA	NA	NA	131327727	131322796	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_131323869_131324300_131324426_131326805_131326936_131327614
transcript_184268.known	chr7	-	5986	9	FSM	ENSG00000128567.17	ENST00000378555.8	5986	9	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_7	473.283064745613	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTCAAGCTCTAGTAGT	-131521617	True	NA	-14	True	ATTAAA	-16	NA	131556628	131500270	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_131504509_131505867_131506036_131506259_131506322_131506578_131506727_131508950_131509029_131509364_131509586_131510235_131510332_131510827_131511434_131556259
transcript_184273.known	chr7	-	2011	8	FSM	ENSG00000128567.17	ENST00000322985.9	2011	8	0	0	0	0	multi-exon	FALSE	canonical	3	1105	junction_6	152.328994117927	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCCTCTTGTAAAATAAC	-131521598	True	NA	-33	True	NA	NA	NA	131556609	131504130	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_131504509_131505867_131506036_131506259_131506322_131506578_131506727_131508950_131509029_131509364_131509586_131510827_131511434_131556259
transcript_184277.known	chr7	-	6170	7	FSM	ENSG00000128567.17	ENST00000446198.5	6170	7	0	0	0	0	multi-exon	FALSE	canonical	3	1105	junction_5	156.110804665575	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTAGTAGTTTCCTCGGA	-131521552	True	NA	-5	True	ATTAAA	-25	NA	131556563	131500261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_131504509_131505867_131506036_131506259_131506322_131506578_131506727_131508950_131509586_131510827_131511434_131556259
transcript_184283.known	chr7	-	1038	9	FSM	ENSG00000106554.13	ENST00000448878.6	1038	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	480.390726388426	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGATTAAAAGAGAAGGGCA	-133064494	True	NA	-46	True	ATTAAA	-34	NA	133082032	132785392	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_132785661_132796441_132796578_132838398_132838470_132885661_132885746_132886973_132886989_132975168_132975287_133024545_133024628_133070141_133070230_133081856
transcript_184286.known	chr7	-	1604	8	FSM	ENSG00000106554.13	ENST00000262570.10	1604	8	0	0	0	0	multi-exon	FALSE	canonical	3	992	junction_6	59.3859737442354	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGCATTGTAGCTCCTC	-133064552	True	NA	-12	True	AATAAA	-17	NA	133082090	132784869	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_132785661_132796441_132796578_132838398_132838470_132885661_132885746_132975168_132975287_133024545_133024628_133070141_133070230_133081856
transcript_184292.known	chr7	+	4182	18	FSM	ENSG00000131558.15	ENST00000253861.5	4182	18	0	0	0	0	multi-exon	TRUE	canonical	3	259	junction_10	24.8968807540277	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCATGTTATTTTTCTT	133248416	True	NA	15	True	ATTAAA	-22	NA	133253077	134065761	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_133253188_133274981_133275172_133288921_133289117_133305876_133306062_133317283_133317391_133356329_133356574_133374827_133375003_133475327_133475474_133480049_133480139_133630044_133630142_133817324_133817545_133895598_133895736_133917582_133917739_133937890_133938070_133997491_133997634_134004911_134005091_134007675_134007836_134064290
transcript_184299.known	chr7	+	2364	9	FSM	ENSG00000131558.15	ENST00000462055.5	2364	9	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_8	22.1045102863646	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATTGGTGAGGGCCTGC	133248433	True	NA	NA	False	AAAAAG	-22	NA	133253094	133481078	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_133253188_133274981_133275172_133288921_133289117_133305876_133306062_133317283_133317391_133356329_133356574_133374827_133375003_133475327_133475474_133480049
transcript_184301.nic	chr7	+	2630	8	NIC	ENSG00000131558.15	novel	492	4	NA	NA	-73	0	combination_of_known_junctions	TRUE	canonical	2	9	junction_1	105.631048311313	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCATGTTATTTTTCTT	NA	False	NA	15	True	ATTAAA	-22	NA	133894989	134065761	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_133895196_133895598_133895736_133917582_133917739_133937890_133938070_133997491_133997634_134004911_134005091_134007675_134007836_134064290
transcript_184302.known	chr7	+	568	2	FSM	ENSG00000131558.15	ENST00000481074.1	568	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTCAACTCGTTTATTT	133248437	True	NA	25	True	AATAAA	-37	NA	133253098	133254018	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_133253188_133253539
transcript_184303.known	chr7	+	3163	20	FSM	ENSG00000155530.3	ENST00000285928.2	3163	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	4.2945562397527	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTCACCCTTCTTTGA	NA	False	NA	NA	False	AATAAA	-18	NA	134127298	134264591	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_134127665_134137022_134137131_134139435_134139518_134143061_134143163_134148237_134148320_134158034_134158160_134163396_134163541_134174555_134174637_134176976_134177064_134178502_134178610_134183733_134183854_134191654_134191752_134196991_134197106_134199219_134199422_134201480_134201577_134221778_134221919_134247555_134247645_134248950_134249077_134258256_134258406_134263844
transcript_184304.nnic	chr7	+	2604	16	NNC	ENSG00000155530.3	novel	3462	16	NA	NA	0	-5908	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	3.94743235815666	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGAGGTTAGGCTTGGCT	134127122	True	NA	3	True	AATAAA	-18	NA	134127357	134204348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_134127665_134137022_134137131_134139435_134139518_134143061_134143163_134148237_134148320_134158034_134158160_134163396_134163541_134174555_134174637_134176976_134177064_134178502_134178610_134183733_134183854_134191654_134191752_134196991_134197106_134199219_134199422_134201480_134201577_134203597
transcript_184305.known	chr7	+	3462	16	FSM	ENSG00000155530.3	ENST00000645682.1	3462	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_15	4.39494659302654	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCAGTGTGTAACTGTT	NA	False	NA	NA	False	NA	NA	NA	134127298	134210256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_134127665_134137022_134137131_134139435_134139518_134143061_134143163_134148237_134148320_134158034_134158160_134163396_134163541_134174555_134174637_134176976_134177064_134178502_134178610_134183733_134183854_134191654_134191752_134196991_134197106_134199219_134199422_134201480_134201577_134208706
transcript_184318.known	chr7	-	6676	10	FSM	ENSG00000205060.11	ENST00000378509.9	6676	10	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_6	17.7458045815599	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTCTTTTTGCCATTATT	-134310369	True	NA	-2	True	AATAAA	-19	NA	134316930	134289331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_134295080_134296390_134296467_134299522_134299599_134300151_134300262_134301760_134301822_134302028_134302111_134304804_134304855_134306671_134306775_134309365_134309480_134316674
transcript_184322.known	chr7	-	1379	9	FSM	ENSG00000205060.11	ENST00000416907.5	1379	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	77.2560677228656	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGAATTCTGAGTCTC	-134310342	True	NA	47	True	NA	NA	NA	134316903	134294551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_134295080_134296390_134296467_134299522_134299599_134300151_134300262_134301760_134301822_134302028_134302111_134306671_134306775_134309365_134309480_134316674
transcript_184332.known	chr7	-	1361	10	FSM	ENSG00000085662.14	ENST00000285930.9	1361	10	0	0	0	0	multi-exon	FALSE	canonical	3	1131	junction_6	125.151562436299	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTTTTGTGAGCTTTG	-134448769	True	NA	-7	True	AATAAA	-15	NA	134459100	134442355	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_134442771_134445237_134445321_134447297_134447382_134447979_134448062_134448386_134448494_134448996_134449120_134449719_134449798_134450785_134450903_134451585_134451754_134458996
transcript_18434.nic	chr1	-	2213	9	NIC	ENSG00000159346.13	novel	2091	8	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_8	466.132743298516	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCACATGTATGGTCTT	-202956404	False	NA	-9	True	AATAAA	-31	NA	202958367	202940831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_202941702_202942024_202942219_202943757_202943946_202944982_202945170_202946438_202946611_202948303_202948421_202950929_202951165_202954240_202954308_202958184
transcript_184341.known	chr7	-	1930	9	FSM	ENSG00000085662.14	ENST00000465351.5	1930	9	0	0	0	0	multi-exon	FALSE	canonical	3	1131	junction_5	132.214787372669	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTGCCTCAAATAAAAAG	-134448771	True	NA	-38	True	NA	NA	NA	134459102	134442386	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_134442771_134445237_134445321_134447297_134448062_134448386_134448494_134448996_134449120_134449719_134449798_134450785_134450903_134451585_134451754_134458996
transcript_184352.known	chr7	-	577	5	FSM	ENSG00000085662.14	ENST00000489022.5	577	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	630.092602321278	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGTGGAGATGATCTTAA	-134448798	True	NA	NA	False	NA	NA	NA	134459129	134449054	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_134449136_134449719_134449798_134450785_134450903_134451585_134451754_134458996
transcript_184353.known	chr7	+	2051	4	FSM	ENSG00000172331.12	ENST00000393132.2	2051	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	103.266645147405	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGTCTCCGTGTGTTTG	134644362	True	NA	25	True	AATAAA	-37	NA	134646830	134679813	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_134646938_134658347_134658669_134661446_134662109_134678852
transcript_184354.known	chr7	+	1711	3	FSM	ENSG00000172331.12	ENST00000344924.8	1711	3	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_2	28.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCTCCGTGTGTTTGGTG	134644384	True	NA	28	True	AATAAA	-40	NA	134646852	134679816	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_134646938_134661446_134662109_134678852
transcript_184357.known	chr7	+	1870	4	FSM	ENSG00000172331.12	ENST00000418040.5	1870	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	102.779159149876	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAAAGTGTCTCCGTGT	134644342	True	NA	20	True	AATAAA	-32	NA	134646810	134679808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_134646938_134647134_134647260_134661446_134662109_134678852
transcript_184358.known	chr7	+	4114	14	FSM	ENSG00000122786.20	ENST00000361901.6	4114	14	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_3	124.61980049156	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTTCTCACTTATTT	134756594	True	NA	40	True	AATAAA	-21	NA	134779677	134970641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_134779750_134843883_134843972_134867692_134867805_134928753_134928901_134932987_134933391_134941091_134941238_134947507_134947770_134950373_134950515_134958068_134958113_134958208_134958291_134959973_134960112_134960532_134960629_134965305_134965387_134968339
transcript_184368.nic	chr7	+	962	5	ISM	ENSG00000122786.20	ENST00000482470.5	3941	11	-260	29147	-30	0	5prime_fragment	FALSE	canonical	3	467	junction_3	140.637832747807	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATACGAGATAGAGGAAA	NA	False	NA	2	True	AAAAAG	-16	NA	134779389	134933242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_134779750_134843883_134843972_134867692_134867805_134928753_134928901_134932987
transcript_184369.nic	chr7	+	1044	5	ISM	ENSG00000122786.20	ENST00000482470.5	3941	11	-260	29065	-30	82	5prime_fragment	FALSE	canonical	3	467	junction_3	140.637832747807	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGACAAGGAAAAGGAGGA	NA	False	NA	5	True	AAGAAA	-9	NA	134779389	134933324	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_134779750_134843883_134843972_134867692_134867805_134928753_134928901_134932987
transcript_184372.nic	chr7	+	702	3	ISM	ENSG00000122786.20	ENST00000424922.5	2124	12	-236	35617	-26	0	5prime_fragment	FALSE	canonical	3	295	junction_1	266	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATACGAGATAGAGGAAA	NA	False	NA	2	True	AAAAAG	-16	NA	134891373	134933242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_134891674_134928753_134928901_134932987
transcript_184373.nic	chr7	+	784	3	ISM	ENSG00000122786.20	ENST00000424922.5	2124	12	-236	35535	-26	82	5prime_fragment	FALSE	canonical	3	295	junction_1	266	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGACAAGGAAAAGGAGGA	NA	False	NA	5	True	AAGAAA	-9	NA	134891373	134933324	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_134891674_134928753_134928901_134932987
transcript_184377.nic	chr7	+	752	3	ISM	ENSG00000146856.14	ENST00000476700.5	2979	5	-52	22824	-12	1323	5prime_fragment	FALSE	canonical	3	26	junction_1	1.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTGTGGACATCTTGA	134985888	True	NA	4	True	AATAAA	-21	NA	134986495	134989687	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_134986702_134987888_134987997_134989249
transcript_184378.known	chr7	+	856	5	FSM	ENSG00000146856.14	ENST00000494702.2	856	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	8.95474734428616	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTTCTATTGAAATTCT	134985947	True	NA	-36	True	NA	NA	NA	134986554	134995550	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_134986702_134987874_134987997_134989249_134989311_134993492_134993679_134995210
transcript_184385.nic	chr7	-	1961	4	NIC	ENSG00000122783.17	novel	1738	4	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	102.878569196893	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTTGTGCTAATGTCT	-135166070	True	NA	-3	True	AATACA	-34	NA	135170757	135165784	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_135166872_135167731_135167808_135168744_135169061_135170275
transcript_184386.nic	chr7	-	1849	4	NIC	ENSG00000122783.17	novel	1738	4	NA	NA	27	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	95.5870749049728	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTTGTGCTAATGTCT	-135166081	True	NA	-3	True	AATACA	-34	NA	135170768	135165784	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_135166872_135167731_135167808_135168744_135169061_135170398
transcript_184387.known	chr7	-	1579	4	FSM	ENSG00000122783.17	ENST00000430372.1	1579	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	100.180947401301	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCCAATACACAAGTGCTA	-135170760	False	NA	-47	True	AATAAA	-17	NA	135170795	135165828	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_135166872_135167731_135167808_135168744_135169061_135170651
transcript_184389.nic	chr7	-	1808	4	NIC	ENSG00000122783.17	novel	1738	4	NA	NA	27	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_2	69.1728912861743	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTTGTGCTAATGTCT	-135166081	True	NA	-3	True	AATACA	-34	NA	135170768	135165784	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_135166872_135167731_135167808_135168785_135169061_135170398
transcript_184390.known	chr7	-	1494	4	FSM	ENSG00000122783.17	ENST00000393114.8	1494	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	67.4405087630737	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTTGTGCTAATGTCT	-135166020	True	NA	-3	True	AATACA	-34	NA	135170707	135165784	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_135166872_135167731_135167808_135168785_135169061_135170651
transcript_184395.nic	chr7	-	1625	4	NIC	ENSG00000122783.17	novel	1738	4	NA	NA	27	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_2	74.5177085590324	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTTGTGCTAATGTCT	-135166081	True	NA	-3	True	AATACA	-34	NA	135170768	135165784	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_135166872_135167731_135167808_135168968_135169061_135170398
transcript_184396.known	chr7	-	596	4	FSM	ENSG00000122783.17	ENST00000483029.2	596	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	74.6234994265658	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGCCAGAAGCCCCTGGA	-135165988	True	NA	NA	False	NA	NA	NA	135170675	135166467	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_135166872_135167731_135167808_135168968_135169061_135170651
transcript_184397.known	chr7	-	2576	3	FSM	ENSG00000122783.17	ENST00000459937.5	2576	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	90.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTGACAACAAAATTTTAT	-135166008	True	NA	NA	False	AATAAA	-18	NA	135170695	135092362	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_135094583_135168748_135169061_135170651
transcript_184406.nnic	chr7	-	1524	3	NIC	ENSG00000122783.17	novel	1579	4	NA	NA	21	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	90.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTAAGTTGTGCTAATGT	-135166087	True	NA	-5	True	AATACA	-32	NA	135170774	135165786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_135166872_135168744_135169061_135170651
transcript_184409.known	chr7	-	578	2	FSM	ENSG00000122783.17	ENST00000486115.1	578	2	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCACCCACTTCTGCCTCT	-135170476	False	4687	NA	False	GGGGCT	-37	NA	135170511	135168595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_135169061_135170398
transcript_184410.known	chr7	-	844	2	FSM	ENSG00000122783.17	ENST00000487774.1	844	2	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGGGGGGGGGTGGTGAGT	-135166051	True	NA	NA	False	NA	NA	NA	135170738	135168303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_135169061_135170651
transcript_184412.known	chr7	-	1738	4	FSM	ENSG00000122783.17	ENST00000424142.5	1738	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	95.5870749049728	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTTGTGCTAATGTCT	-135170626	False	NA	-3	True	AATACA	-34	NA	135170661	135165784	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_135166872_135167731_135167808_135168748_135169061_135170398
transcript_184413.known	chr7	-	1727	4	FSM	ENSG00000122783.17	ENST00000617987.1	1727	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	102.878569196893	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGTGCTAATGTCTTTC	-135170489	False	NA	0	True	AATACA	-37	NA	135170524	135165781	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_135166872_135167731_135167808_135168748_135169061_135170275
transcript_184418.known	chr7	-	4580	15	FSM	ENSG00000105875.15	ENST00000354475.5	4580	15	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_13	6.72074157715789	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTATCTCTCCTTCCATA	-135210791	True	NA	-5	True	AATAAA	-16	NA	135211526	135183838	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_135186316_135186971_135187170_135188432_135188546_135189343_135189453_135193230_135193400_135193577_135193673_135194933_135195085_135196143_135196338_135197992_135198152_135204267_135204434_135205927_135206059_135207119_135207203_135208790_135208999_135209575_135209756_135211379
transcript_18442.known	chr1	-	2091	8	FSM	ENSG00000159346.13	ENST00000340990.10	2091	8	0	0	0	0	multi-exon	FALSE	canonical	3	985	junction_3	60.9516369002205	2213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCACATGTATGGTCTT	-202947405	True	NA	-9	True	AATAAA	-31	NA	202958312	202940831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_202941702_202942024_202942219_202943757_202943946_202944982_202945170_202946438_202946611_202948303_202948421_202950929_202951165_202958184
transcript_184426.known	chr7	-	4445	14	FSM	ENSG00000105875.15	ENST00000684339.1	4445	14	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	11.3126624346768	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCCATCCCGGGTGAGCG	-135210820	True	NA	-56	True	AAGAAA	-34	NA	135211555	135183889	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_135186316_135186971_135187170_135189343_135189453_135193230_135193400_135193577_135193673_135194933_135195085_135196143_135196338_135197992_135198152_135204267_135204434_135205927_135206059_135207119_135207203_135208790_135208999_135209575_135209756_135211379
transcript_184428.known	chr7	-	3563	12	FSM	ENSG00000080802.20	ENST00000541284.6	3538	12	-25	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	36.0777397543849	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGGTTGTCCTTGTTTTT	-135505633	True	NA	1	True	AATAAA	-22	NA	135510127	135361794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_135363187_135363853_135364067_135393917_135394416_135395633_135395884_135398168_135398227_135410514_135410649_135413487_135413614_135414330_135414433_135415175_135415263_135422155_135422354_135438157_135438424_135509888
transcript_184430.known	chr7	-	3507	12	FSM	ENSG00000080802.20	ENST00000451834.5	3507	12	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	30.9173785680588	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGGTTGTCCTTGTTTTT	-135505586	True	NA	1	True	AATAAA	-22	NA	135510080	135361794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_135363187_135363853_135364067_135393917_135394416_135395633_135395884_135398168_135398227_135410523_135410649_135413487_135413614_135414330_135414433_135415175_135415263_135422155_135422354_135438157_135438424_135509888
transcript_184431.known	chr7	-	3297	11	FSM	ENSG00000080802.20	ENST00000423368.6	3297	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	32.8275798681535	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTTGGGTTGTCCTTGTT	-135505583	True	NA	-2	True	AATAAA	-19	NA	135510077	135361797	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_135363187_135393917_135394416_135395633_135395884_135398168_135398227_135410514_135410649_135413487_135413614_135414330_135414433_135415175_135415263_135422155_135422354_135438157_135438424_135509888
transcript_184432.known	chr7	-	2215	11	FSM	ENSG00000080802.20	ENST00000361528.8	2215	11	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	24.943135328182	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAGAGGAGCAACCATTA	-135505597	True	NA	NA	False	NA	NA	NA	135510091	135362884	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_135363187_135393917_135394416_135395633_135395884_135398168_135398227_135410523_135410649_135413487_135413614_135414330_135414433_135415175_135415263_135422155_135422354_135438157_135438424_135509888
transcript_184433.known	chr7	-	3783	11	FSM	ENSG00000080802.20	ENST00000315544.6	3783	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	32.6563929422709	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCCTGTGGAGCTGAGGC	-135505633	True	NA	NA	False	NA	NA	NA	135510127	135387069	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_135388895_135393917_135394416_135395633_135395884_135398168_135398227_135410514_135410649_135413487_135413614_135414330_135414433_135415175_135415263_135422155_135422354_135438157_135438424_135509888
transcript_184435.known	chr7	-	4642	11	FSM	ENSG00000080802.20	ENST00000428680.6	4642	11	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	24.6919015063644	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGCCTTGAAATGTTTT	-135505582	True	NA	NA	False	AAAAAG	-3	NA	135510076	135386150	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_135388895_135393917_135394416_135395633_135395884_135398168_135398227_135410523_135410649_135413487_135413614_135414330_135414433_135415175_135415263_135422155_135422354_135438157_135438424_135509888
transcript_184438.nic	chr7	-	588	3	ISM	ENSG00000080802.20	ENST00000315544.6	3783	11	-5	35206	-5	0	5prime_fragment	FALSE	canonical	3	78	junction_2	24.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAATGAGAGAAAACA	-135505638	True	NA	-29	True	GATAAA	-17	NA	135510132	135422275	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_135422354_135438157_135438424_135509888
transcript_184442.known	chr7	+	6264	43	FSM	ENSG00000155561.15	ENST00000285968.11	6264	43	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_1	85.8674194256521	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGTATGGTTAATCTTT	135546248	True	NA	NA	False	AATAAA	-21	NA	135557916	135648753	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_135557973_135571104_135571248_135573653_135573826_135576269_135576415_135576968_135577129_135577795_135578025_135578750_135578916_135584831_135585008_135587574_135587692_135587854_135587993_135591449_135591601_135592986_135593193_135594546_135594730_135597367_135597419_135597997_135598208_135600869_135600970_135601369_135601508_135602804_135602995_135604339_135604461_135606144_135606227_135606750_135606916_135607246_135607372_135614158_135614274_135615915_135616066_135616654_135616727_135617089_135617248_135617601_135617683_135618411_135618604_135619422_135619691_135619789_135619889_135622776_135622926_135625163_135625356_135626239_135626362_135627972_135628112_135630343_135630471_135635580_135635658_135637930_135638060_135638556_135638684_135643191_135643359_135644894_135645019_135645467_135645597_135646157_135646232_135648403
transcript_184448.known	chr7	-	2897	16	FSM	ENSG00000164707.16	ENST00000354042.8	2897	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	1.6	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAAAGTTGTATCTAGTCT	-135728101	True	NA	NA	False	AATAAA	-33	NA	135728186	135681236	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_135681701_135684123_135684262_135685521_135685684_135691200_135691326_135691547_135691646_135692322_135692425_135694136_135694239_135695367_135695488_135699363_135699549_135701679_135701761_135702844_135702882_135705595_135705651_135706127_135706301_135708113_135708251_135721394_135721524_135727397
transcript_184449.known	chr7	+	2461	3	FSM	ENSG00000243317.8	ENST00000507606.3	2461	3	0	0	0	0	multi-exon	FALSE	canonical	3	774	junction_1	85	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTGCTTTTTGGCTAGT	135654954	True	NA	9	True	AATAAA	-20	NA	135662513	135676416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_135662595_135672752_135672807_135674090
transcript_184455.known	chr7	-	3782	4	FSM	ENSG00000105887.11	ENST00000393085.4	3782	4	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_3	8.83176086632785	312	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAATGTGTCAGCAGCATT	-135971346	True	NA	-7	True	AATAAA	-17	NA	135977359	135926759	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_135930013_135950598_135950683_135951516_135951631_135977028
transcript_184456.known	chr7	-	1482	5	FSM	ENSG00000105894.12	ENST00000348225.7	1482	5	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	17.1026313764871	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTTTTGTGTTCAATAA	-137343620	True	NA	NA	False	AATAAA	-24	NA	137343733	137227340	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_137228076_137251229_137251392_137253463_137253638_137254858_137254975_137343438
transcript_184459.known	chr7	-	1599	6	FSM	ENSG00000105894.12	ENST00000393083.2	1599	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	97.6577697881741	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAGGTGATGCTGAAAAAA	-137343706	False	NA	NA	False	AATAAA	-1	NA	137343774	137227363	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_137228076_137236143_137236243_137251229_137251392_137253463_137253638_137254858_137254975_137343438
transcript_184461.known	chr7	+	862	1	FSM	ENSG00000230383.1	ENST00000456481.1	862	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCTAAATGTCTTAAGAAC	137721903	False	NA	NA	False	NA	NA	NA	137721984	137722846	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_137722000_137722800
transcript_184462.known	chr7	-	7441	12	FSM	ENSG00000182158.16	ENST00000330387.11	7441	12	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_5	10.0387678279823	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTGCCCAGTCTTTATA	-137997769	True	NA	-1	True	AATAAA	-21	NA	138002086	137874978	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_137880552_137882411_137882629_137884994_137885122_137885402_137885503_137901353_137901423_137903958_137904018_137905701_137905849_137908251_137908437_137912990_137913079_137915836_137916013_137928149_137928367_138001603
transcript_184463.known	chr7	-	2360	10	FSM	ENSG00000182158.16	ENST00000456390.5	2360	10	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_3	10.130018951148	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	-137997750	True	NA	NA	False	NA	NA	NA	138002067	137884266	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_137885122_137885402_137885503_137901353_137901423_137903958_137904018_137905701_137905849_137908251_137908437_137912990_137913079_137915836_137916013_137928149_137928367_138001603
transcript_184465.known	chr7	-	1105	4	FSM	ENSG00000182158.16	ENST00000452463.5	1105	4	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	7.25718035235908	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTATTTTCCCATATATG	-137997730	True	NA	2	True	AATAAA	-35	NA	138002047	137912810	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_137913079_137915836_137916013_137928149_137928367_138001603
transcript_184473.known	chr7	+	3799	19	FSM	ENSG00000122779.18	ENST00000415680.6	3799	19	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_9	144.863633194195	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTTGATTTTTGTTTT	138460312	False	NA	NA	False	ATTAAA	-17	NA	138460434	138585585	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_138460913_138504289_138504409_138515211_138515360_138519188_138519322_138525240_138525358_138529115_138529231_138538656_138538804_138551062_138551181_138554697_138554865_138567480_138567655_138570829_138571004_138573506_138573643_138576372_138576446_138577419_138577589_138579203_138579533_138580561_138580695_138581696_138581772_138583849_138584000_138584741
transcript_184476.known	chr7	+	8488	19	FSM	ENSG00000122779.18	ENST00000343526.9	8488	19	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_9	94.5673709813326	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTGGTATGGAATAAAGG	138442558	True	NA	8	True	AATAAA	-21	NA	138460258	138589996	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_138460913_138504289_138504409_138515211_138515360_138519188_138519322_138525240_138525358_138529115_138529231_138538656_138538804_138551062_138551181_138554697_138554967_138567480_138567655_138570829_138571004_138573506_138573643_138576372_138576446_138577419_138577589_138579203_138579533_138580561_138580695_138581696_138581772_138583849_138584000_138584741
transcript_184494.nic	chr7	+	2997	16	ISM	ENSG00000122779.18	ENST00000343526.9	8488	19	-27	9340	-27	-4929	5prime_fragment	FALSE	canonical	3	482	junction_9	75.0117027906683	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAGGCCTTGTTAAGTTA	138442531	True	NA	NA	False	AAAAAG	-5	NA	138460231	138580656	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_138460913_138504289_138504409_138515211_138515360_138519188_138519322_138525240_138525358_138529115_138529231_138538656_138538804_138551062_138551181_138554697_138554967_138567480_138567655_138570829_138571004_138573506_138573643_138576372_138576446_138577419_138577589_138579203_138579533_138580561
transcript_184501.nic	chr7	+	2480	14	ISM	ENSG00000122779.18	ENST00000343526.9	8488	19	-13	12487	-13	3867	5prime_fragment	FALSE	canonical	3	482	junction_9	80.282563118204	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGGACCACCGGAAAATT	138442545	True	NA	NA	False	AATAAA	-10	NA	138460245	138577509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_138460913_138504289_138504409_138515211_138515360_138519188_138519322_138525240_138525358_138529115_138529231_138538656_138538804_138551062_138551181_138554697_138554967_138567480_138567655_138570829_138571004_138573506_138573643_138576372_138576446_138577419
transcript_184502.nic	chr7	+	1150	5	ISM	ENSG00000122779.18	ENST00000415680.6	3799	19	-198	60271	-22	0	5prime_fragment	FALSE	canonical	3	620	junction_1	64.3311744024621	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAAATACATAAAATTC	138442536	True	NA	NA	False	NA	NA	NA	138460236	138525314	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_138460913_138504289_138504409_138515211_138515360_138519188_138519322_138525240
transcript_184511.known	chr7	-	1420	12	FSM	ENSG00000157703.16	ENST00000436657.5	1420	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	9.33047968968742	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGATATTCTCCCATG	-138664213	False	NA	-2	True	AATAAA	-18	NA	138664224	138594285	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_138594622_138596416_138596531_138621045_138621136_138625968_138626051_138627349_138627462_138628157_138628364_138630048_138630123_138644716_138644846_138649011_138649138_138656447_138656512_138663073_138663146_138664209
transcript_184514.known	chr7	-	3136	22	FSM	ENSG00000105929.16	ENST00000310018.7	3136	22	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	2.30743646468299	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTCCTTAAGATGTCTT	-138798161	True	NA	1	True	AATAAA	-16	NA	138798196	138706293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_138706718_138709623_138709796_138715763_138715882_138721896_138722026_138728760_138728863_138732876_138733094_138734135_138734255_138739539_138739634_138745122_138745281_138747424_138747565_138749166_138749318_138752624_138752838_138755688_138755783_138756457_138756541_138759751_138759879_138762339_138762435_138762899_138763026_138768779_138768875_138769172_138769252_138771130_138771265_138786157_138786261_138798033
transcript_184515.known	chr7	-	3090	21	FSM	ENSG00000105929.16	ENST00000393054.5	3090	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	2.44744765010408	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTTCCTTAAGATGTCT	-138774023	False	NA	0	True	AATAAA	-15	NA	138774037	138706294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_138706718_138709623_138709796_138715763_138715882_138721896_138722026_138728760_138728863_138732876_138733094_138734135_138734255_138739539_138739634_138745122_138745281_138747424_138747565_138749166_138749318_138752624_138752838_138755688_138755783_138756457_138756541_138759751_138759879_138762339_138762435_138762899_138763026_138768779_138768875_138769172_138769252_138771130_138771265_138773816
transcript_184517.known	chr7	+	1153	3	FSM	ENSG00000214128.11	ENST00000397602.7	1153	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGGCGGCAGAGCAAGA	NA	False	NA	NA	False	NA	NA	NA	138797951	138803748	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_138798187_138801329_138801399_138802899
transcript_184518.nnic	chr7	+	1096	2	Antisense	novelGene_ENSG00000146858.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	60	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTGTTGCTTCTACTTT	NA	False	NA	7	True	AATAAA	-15	NA	139035184	139036947	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr7_+_139035986_139036652
transcript_184520.known	chr7	-	1766	5	FSM	ENSG00000146858.8	ENST00000275766.2	1766	5	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	9.01387818865997	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTGTCTGCTTTCTGA	-139035341	True	NA	NA	False	AATATA	-18	NA	139036042	139025705	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_139026561_139026707_139026834_139028701_139028961_139034542_139034679_139035652
transcript_184522.known	chr7	-	7177	13	FSM	ENSG00000105939.14	ENST00000242351.10	7177	13	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_9	29.1617853058111	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTACTGCCTTTATTTGAT	-139107416	True	NA	-4	True	AATAAA	-19	NA	139109720	139043514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_139047854_139053450_139053582_139053964_139054096_139055204_139055296_139061035_139061139_139064878_139065000_139073855_139074031_139076285_139076410_139078551_139078654_139079469_139080244_139083779_139084033_139089623_139089760_139109023
transcript_184527.nic	chr7	-	2681	11	ISM	ENSG00000105939.14	ENST00000242351.10	7177	13	-34	10510	-34	6313	5prime_fragment	FALSE	canonical	3	215	junction_7	29.6649624978694	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTCAAGATTGAAAAGATAA	-139109689	False	NA	-7	True	TTTAAA	-15	NA	139109754	139054024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_139054096_139055204_139055296_139061035_139061139_139064878_139065000_139073855_139074031_139076285_139076410_139078551_139078654_139079469_139080244_139083779_139084033_139089623_139089760_139109023
transcript_184530.known	chr7	-	3182	9	FSM	ENSG00000105939.14	ENST00000471652.1	3182	9	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_5	32.6704664031599	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGGAGTTGGATATTTT	-139107415	True	NA	0	True	AGTAAA	-21	NA	139109719	139060337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_139061139_139064878_139065000_139073855_139074031_139076285_139076410_139078551_139078654_139079469_139080244_139083779_139084033_139089623_139089760_139109023
transcript_184532.known	chr7	+	4299	18	FSM	ENSG00000105948.13	ENST00000464848.5	4299	18	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_8	14.4586272901056	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGATATTCTGTTGAGTG	139132752	True	NA	9	True	ATTAAA	-20	NA	139133777	139191986	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_139133861_139134654_139134793_139137846_139137940_139139889_139140005_139142255_139142306_139147144_139147291_139148205_139148378_139160947_139161023_139165131_139165235_139166839_139166896_139168343_139168398_139169288_139169353_139178213_139178303_139178514_139178599_139179573_139179644_139181091_139181199_139187405_139187540_139189320
transcript_184559.known	chr7	+	2411	11	FSM	ENSG00000146963.18	ENST00000456182.5	2411	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	317.14482496172	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCACCATTATTAAACTG	139347419	True	NA	-28	True	AATAAA	-17	NA	139359911	139423151	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_139360323_139374400_139374472_139376061_139376157_139398598_139398698_139402136_139402248_139405643_139405788_139407173_139407351_139409562_139409655_139412550_139412581_139417537_139417730_139422162
transcript_184568.known	chr7	+	2661	10	FSM	ENSG00000146963.18	ENST00000354926.9	2661	10	0	0	0	0	multi-exon	FALSE	canonical	3	683	junction_1	63.8783566197851	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAATGAGACTTAAGTTTC	139347401	True	NA	29	True	AATAAA	-19	NA	139359893	139423454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_139360323_139376061_139376157_139398598_139398698_139402136_139402248_139405643_139405788_139407173_139407351_139409562_139409655_139412550_139412581_139417537_139417730_139422162
transcript_184578.nic	chr7	+	2913	9	ISM	ENSG00000146963.18	ENST00000354926.9	2661	10	-126	4307	-78	-3364	5prime_fragment	FALSE	canonical	3	683	junction_1	59.7201808436646	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCCTATGTGAGTTAGAA	NA	False	NA	NA	False	AAAACA	-31	NA	139359767	139419147	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_139360323_139376061_139376157_139398598_139398698_139402136_139402248_139405643_139405788_139407173_139407351_139409562_139409655_139412550_139412581_139417537
transcript_184589.nic	chr7	+	1233	7	ISM	ENSG00000146963.18	ENST00000354926.9	2661	10	-126	13840	-78	-3211	5prime_fragment	FALSE	canonical	3	683	junction_1	63.9843730921856	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGAGAGAGAGAGAGAA	NA	False	NA	13	True	AAGAAA	-21	NA	139359767	139409614	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_139360323_139376061_139376157_139398598_139398698_139402136_139402248_139405643_139405788_139407173_139407351_139409562
transcript_184594.known	chr7	+	460	2	FSM	ENSG00000164898.13	ENST00000481123.1	460	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGGTTTTTCTCTGTAA	139340431	True	NA	5	True	ATTAAA	-12	NA	139340449	139345790	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_139340620_139345500
transcript_184595.known	chr7	+	1014	2	FSM	ENSG00000164898.13	ENST00000297534.7	1014	2	0	0	0	0	multi-exon	FALSE	canonical	3	558	junction_1	0	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTTCCCTTGTCCCCA	139338731	True	NA	NA	False	AATAAA	-20	NA	139341336	139346328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_139341523_139345500
transcript_184598.nnic	chr7	-	2981	6	NNC	ENSG00000188883.5	novel	2158	5	NA	NA	-46	2079	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	12.2311078811365	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATTGTGTCTGAAATATC	-139482587	True	NA	-20	True	AATAAA	-30	NA	139483719	139450610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_139451254_139452555_139453708_139454110_139454215_139479626_139479773_139480145_139480248_139482885
transcript_184600.nnic	chr7	-	2209	6	NNC	ENSG00000188883.5	novel	2158	5	NA	NA	-46	2079	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	12.2311078811365	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATTGTGTCTGAAATATC	-139482587	True	NA	-20	True	AATAAA	-30	NA	139483719	139450610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_139451265_139453338_139453708_139454110_139454215_139479626_139479773_139480145_139480248_139482885
transcript_184602.nnic	chr7	-	3037	6	NNC	ENSG00000188883.5	novel	2158	5	NA	NA	-46	2079	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.2311078811365	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATTGTGTCTGAAATATC	-139482587	True	NA	-20	True	AATAAA	-30	NA	139483719	139450610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_139451282_139452527_139453708_139454110_139454215_139479626_139479773_139480145_139480248_139482885
transcript_184612.known	chr7	-	2158	5	FSM	ENSG00000188883.5	ENST00000340940.5	2158	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	4.65698400254929	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTCCAGCTAGACCTCCA	-139482541	True	NA	NA	False	NA	NA	NA	139483673	139452689	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_139453708_139454110_139454215_139479626_139479773_139480145_139480248_139482885
transcript_184624.nnic	chr7	-	1549	4	NIC	ENSG00000188883.5	novel	2158	5	NA	NA	-46	95	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	13.5728487143349	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCGGATTCCAATCTGGG	-139482587	True	NA	-7	True	ATTAAA	-43	NA	139483719	139453242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_139453708_139454110_139454215_139479626_139479773_139482885
transcript_184630.known	chr7	-	1148	2	FSM	ENSG00000188883.5	ENST00000393039.2	1148	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATGACATTGGGATGGT	-139482531	True	NA	-102	True	NA	NA	NA	139483663	139453337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_139453708_139482885
transcript_184633.known	chr7	-	3021	12	FSM	ENSG00000059378.13	ENST00000263549.8	3021	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	4.37876166501538	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGATGAAGACTGAAGCTC	-140062269	True	NA	-14	True	AATAAA	-17	NA	140062951	140023748	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_140024886_140026196_140026349_140027275_140027407_140028612_140028689_140034234_140034332_140037714_140037857_140041643_140041840_140046883_140047008_140054661_140054764_140056855_140057154_140057898_140058035_140062521
transcript_184634.known	chr7	-	2861	11	FSM	ENSG00000059378.13	ENST00000473341.5	2861	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	7.31368580129062	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGATGAAGACTGAAGCTC	-140062251	True	NA	-14	True	AATAAA	-17	NA	140062933	140023748	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_140024886_140026196_140026349_140027275_140027407_140028612_140028689_140034234_140034332_140041643_140041840_140046883_140047008_140054661_140054764_140056855_140057154_140057898_140058035_140062521
transcript_184635.nic	chr7	-	3096	11	NIC	ENSG00000059378.13	novel	3021	12	NA	NA	-206	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	3.44093010681705	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGATGAAGACTGAAGCTC	-140063144	True	NA	-14	True	AATAAA	-17	NA	140063157	140023748	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_140024886_140026196_140026349_140028612_140028689_140034234_140034332_140037714_140037857_140041643_140041840_140046883_140047008_140054661_140054764_140056855_140057154_140057898_140058035_140062521
transcript_184640.known	chr7	-	9220	20	FSM	ENSG00000006459.11	ENST00000397560.7	9220	20	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_13	4.49869171502276	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGACTTTGTTCCCTTTT	-140175434	True	NA	0	True	TATAAA	-42	NA	140176983	140084745	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_140091189_140091803_140092078_140094055_140094139_140096554_140096764_140096898_140097048_140097544_140097643_140098878_140099034_140099898_140100024_140101950_140102161_140111094_140111185_140113490_140113583_140119112_140119220_140120441_140120530_140124620_140124784_140126636_140126824_140127441_140127584_140129492_140129654_140133538_140133657_140139104_140139191_140176743
transcript_184641.nic	chr7	-	2060	14	ISM	ENSG00000006459.11	ENST00000397560.7	9220	20	-170	14207	-170	-8050	5prime_fragment	FALSE	canonical	3	25	junction_7	5.22057830798682	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGCAAAAATGAAGATAGAAG	-140177124	True	NA	NA	False	GATAAA	-15	NA	140177153	140098952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_140099034_140099898_140100024_140101950_140102161_140111094_140111185_140113490_140113583_140119112_140119220_140120441_140120530_140124620_140124784_140126636_140126824_140127441_140127584_140129492_140129654_140133538_140133657_140139104_140139191_140176743
transcript_184642.known	chr7	+	2457	1	FSM	ENSG00000260231.2	ENST00000566699.2	2457	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTCTCAGATATTTTTC	140177056	True	NA	NA	False	ATTAAA	-21	NA	140177183	140179640	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_140177200_140179600
transcript_184650.known	chr7	-	3330	15	FSM	ENSG00000157800.18	ENST00000326232.14	3330	15	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_7	59.0634387410551	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTCGTTACTTAAA	-140392400	True	NA	NA	False	AATAAA	-18	NA	140398530	140333751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_140335505_140337283_140337350_140343411_140343564_140345215_140345264_140345868_140345971_140348625_140348768_140351272_140351452_140352061_140352147_140355667_140355765_140358639_140358786_140364407_140364492_140369589_140369683_140380281_140380391_140382437_140382597_140398415
transcript_184652.nic	chr7	-	3850	15	NIC	ENSG00000157800.18	novel	3330	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_7	106.398581584837	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTCGTTACTTAAA	-140392402	True	NA	NA	False	AATAAA	-18	NA	140398532	140333751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_140335505_140337283_140337350_140343411_140343564_140345215_140345264_140345868_140345971_140348625_140348768_140351272_140351970_140352061_140352147_140355667_140355765_140358639_140358786_140364407_140364492_140369589_140369683_140380281_140380391_140382437_140382597_140398415
transcript_184659.nic	chr7	-	3247	14	NIC	ENSG00000157800.18	novel	3330	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_7	120.721842736141	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTCGTTACTTAAA	-140392402	True	NA	NA	False	AATAAA	-18	NA	140398532	140333751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_140335505_140337283_140337350_140343411_140343564_140345215_140345264_140345868_140345971_140348625_140348768_140351272_140351452_140355667_140355765_140358639_140358786_140364407_140364492_140369589_140369683_140380281_140380391_140382437_140382597_140398415
transcript_18466.known	chr1	-	1624	9	FSM	ENSG00000159348.13	ENST00000367249.9	1624	9	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_8	9.32402809948576	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTTGTTGTGTCTGGGGTC	-202965294	True	NA	-4	True	AATAAA	-31	NA	202967257	202961872	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_202962700_202963065_202963166_202963641_202963728_202964611_202964696_202965370_202965501_202965886_202965994_202966527_202966601_202966748_202966899_202967190
transcript_184660.known	chr7	-	2111	14	FSM	ENSG00000157800.18	ENST00000460560.5	2111	14	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_9	151.163260618931	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGATCTTGGATTGTC	-140392378	True	NA	NA	False	GGGGCT	-37	NA	140398508	140335320	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_140335505_140337283_140337350_140343411_140343564_140345215_140345264_140345868_140345971_140348625_140348768_140351272_140351970_140352061_140352147_140355667_140355765_140364407_140364492_140369589_140369683_140380281_140380391_140382437_140382597_140398415
transcript_184667.nic	chr7	-	3132	13	NIC	ENSG00000157800.18	novel	3330	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	128.538877603453	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTCGTTACTTAAA	-140392402	True	NA	NA	False	AATAAA	-18	NA	140398532	140333751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_140335505_140337283_140337350_140345868_140345971_140348625_140348768_140351272_140351452_140352061_140352147_140355667_140355765_140358639_140358786_140364407_140364492_140369589_140369683_140380281_140380391_140382437_140382597_140398415
transcript_18467.known	chr1	-	863	8	FSM	ENSG00000159348.13	ENST00000482572.5	863	8	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_6	35.2113154354375	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGCGATTCACCTACTGA	-202965280	True	NA	NA	False	NA	NA	NA	202967243	202962546	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_202962700_202963065_202963166_202963641_202963728_202964611_202964696_202965370_202965501_202965886_202965994_202966748_202966899_202967190
transcript_184672.known	chr7	-	2955	12	FSM	ENSG00000157800.18	ENST00000340308.7	2955	12	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	123.076674348128	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTCGTTACTTAAA	-140392327	True	NA	NA	False	AATAAA	-18	NA	140398457	140333751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_140335505_140337283_140337350_140348625_140348768_140351272_140351452_140352061_140352147_140355667_140355765_140358639_140358786_140364407_140364492_140369589_140369683_140380281_140380391_140382437_140382597_140398415
transcript_184687.known	chr7	+	2661	4	FSM	ENSG00000146955.11	ENST00000537763.6	2661	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	5.18544972870135	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTGTTGTACTGCCCCT	140404038	True	NA	16	True	ATTAAA	-29	NA	140404057	140427974	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_140404218_140407623_140407848_140411873_140412058_140425881
transcript_184693.known	chr7	-	3094	8	FSM	ENSG00000133606.11	ENST00000255977.7	3094	8	0	0	0	0	multi-exon	FALSE	canonical	3	634	junction_3	70.6454210137082	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTGTTTTTGAAATGTG	-140470754	True	NA	1	True	AATAAA	-34	NA	140479505	140453032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_140454730_140455094_140455234_140455789_140455901_140456651_140456867_140459006_140459234_140459706_140459937_140471882_140472012_140479159
transcript_184703.known	chr7	-	1390	6	FSM	ENSG00000133606.11	ENST00000495305.5	1390	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	290.446828180306	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAGGAGTGATGGGTGAA	-140470617	True	NA	NA	False	AGTAAA	-27	NA	140479368	140454142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_140454730_140455094_140455234_140455789_140455901_140456651_140456867_140471882_140472012_140479159
transcript_184707.known	chr7	-	1601	5	FSM	ENSG00000133606.11	ENST00000443720.6	1601	5	0	0	0	0	multi-exon	FALSE	canonical	3	711	junction_2	49.6506545777596	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAGGAGTCTGTGTGAA	-140470748	True	NA	-43	True	AATAAA	-16	NA	140479499	140456191	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_140456867_140459006_140459234_140459706_140459937_140471882_140472012_140479159
transcript_184712.known	chr7	-	3735	19	FSM	ENSG00000146966.13	ENST00000275884.10	3735	19	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_18	12.4969131991133	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGTTTTCTGTTTATTA	-140640732	False	NA	28	True	ATTAAA	-14	NA	140640776	140518419	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_140518739_140519631_140519719_140521854_140522101_140523306_140523425_140525750_140525793_140527317_140527496_140544617_140544767_140546798_140546940_140555635_140555714_140558142_140558213_140559707_140559818_140567085_140567274_140568762_140568814_140569644_140569739_140573807_140574009_140585588_140585711_140587652_140587781_140601402_140602543_140640503
transcript_184714.known	chr7	-	9578	19	FSM	ENSG00000157764.14	ENST00000496384.7	9578	19	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	12.3714376341556	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGACTATTTTTCTAACA	-140924773	False	NA	1	True	AATAAA	-26	NA	140924810	140719326	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_140726517_140734616_140734771_140739811_140739947_140749286_140749419_140753274_140753394_140754186_140754234_140776911_140777089_140777990_140778076_140781575_140781694_140783020_140783158_140787547_140787585_140794307_140794468_140800361_140800482_140801411_140801561_140807959_140808063_140808891_140808996_140834608_140834873_140850110_140850213_140924565
transcript_184716.known	chr7	-	6458	18	FSM	ENSG00000157764.14	ENST00000646891.1	6458	18	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_9	9.50213962428707	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGGTTGTGGTGGCTCA	-140923437	True	NA	NA	False	AATAAA	-18	NA	140924928	140730664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_140734771_140739811_140739947_140749286_140749419_140753274_140753394_140754186_140754234_140776911_140777089_140777990_140778076_140781575_140781694_140783020_140783158_140787547_140787585_140794307_140794468_140800361_140800482_140801411_140801561_140807959_140808063_140808891_140808996_140834608_140834873_140850110_140850213_140924565
transcript_184720.known	chr7	-	1180	3	FSM	ENSG00000157764.14	ENST00000469930.2	1180	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAAGTCAAAATTTTTCAT	-140924705	False	NA	-12	True	AATAAA	-15	NA	140924742	140833971	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_140834873_140850110_140850213_140924565
transcript_184725.known	chr7	+	2574	8	FSM	ENSG00000133597.11	ENST00000072869.9	2574	8	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	4.89064079103534	351	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTCTCATTTCTTGAC	140672503	True	NA	16	True	AATAAA	-16	NA	140672944	140695110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_140674264_140674610_140674758_140679154_140679284_140681041_140681138_140686989_140687242_140689596_140689726_140690759_140690814_140694662
transcript_184738.known	chr7	+	503	5	FSM	ENSG00000090266.13	ENST00000472695.5	503	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1856.13541733894	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGAGTTGTGGATCTTT	140695962	True	NA	23	True	ATTAAA	-33	NA	140696991	140706643	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_140697075_140700869_140700960_140702865_140703011_140704859_140704964_140706562
transcript_184739.known	chr7	+	726	4	FSM	ENSG00000090266.13	ENST00000464566.5	726	4	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_3	1761.85981281145	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGGATTTGAATTAGTGA	140671774	False	NA	NA	False	AATAAA	-25	NA	140696747	140706500	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_140696843_140702865_140703011_140704859_140704964_140706118
transcript_184740.known	chr7	+	465	4	FSM	ENSG00000090266.13	ENST00000247866.9	465	4	0	0	0	0	multi-exon	FALSE	canonical	3	3075	junction_3	466.612139671579	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGAGTTGTGGATCTTT	140671734	True	NA	23	True	ATTAAA	-33	NA	140696707	140706643	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_140696843_140702865_140703011_140704859_140704964_140706562
transcript_184742.known	chr7	+	420	4	FSM	ENSG00000090266.13	ENST00000460088.5	420	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	1753.45075652428	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTTGTGGATCTTTTTT	140695958	True	NA	26	True	ATTAAA	-36	NA	140696987	140706646	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_140697075_140702865_140703011_140704859_140704964_140706562
transcript_184744.known	chr7	+	499	4	FSM	ENSG00000090266.13	ENST00000471136.5	499	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	1765.2944985658	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGAGTTGTGGATCTTTT	140697205	False	NA	24	True	ATTAAA	-34	NA	140697223	140706644	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_140697392_140702865_140703011_140704859_140704964_140706562
transcript_184746.known	chr7	-	622	3	FSM	ENSG00000090263.16	ENST00000467334.1	622	3	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_2	487	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGATGATTTGTTTGG	-141006244	True	NA	-10	True	AATAAA	-12	NA	141014966	141006168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_141006536_141010418_141010618_141014910
transcript_184747.known	chr7	-	688	3	FSM	ENSG00000090263.16	ENST00000496958.5	688	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	574	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGATGATTTGTTTGGG	-141014417	False	NA	-9	True	AATAAA	-13	NA	141014429	141006167	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_141006536_141010418_141010661_141014351
transcript_184748.known	chr7	-	853	3	FSM	ENSG00000090263.16	ENST00000393008.7	853	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	546	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTAAACTTCTTTCATC	-141014667	False	NA	NA	False	NA	NA	NA	141014679	141006053	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_141006536_141010418_141010661_141014550
transcript_184749.known	chr7	-	4210	3	FSM	ENSG00000090263.16	ENST00000324787.10	4210	3	0	0	0	0	multi-exon	FALSE	canonical	3	589	junction_2	281.5	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCTTCACCCCGTCTC	-141006230	True	NA	NA	False	AATAAA	-17	NA	141014952	141002609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_141006536_141010418_141010661_141014910
transcript_184750.known	chr7	-	541	2	FSM	ENSG00000090263.16	ENST00000496641.1	541	2	0	0	0	0	multi-exon	FALSE	canonical	3	589	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAGAGGTGTTTAATCAT	-141006227	True	NA	NA	False	AATAGA	-10	NA	141014949	141010158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_141010661_141014910
transcript_184751.nic	chr7	+	3057	3	ISM	ENSG00000261115.7	ENST00000565468.6	10726	4	-1202	41661	-1202	-41661	5prime_fragment	FALSE	canonical	1	10	junction_2	7.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTAGCCAGGCATG	141072842	False	NA	NA	False	ACTAAA	-21	NA	141072861	141438719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_141074693_141212590_141212705_141437607
transcript_184755.known	chr7	+	2256	16	FSM	ENSG00000006530.18	ENST00000648068.1	2256	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	73.7637670766165	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAAAGTATGTATTTGCT	141549302	True	NA	-49	True	NA	NA	NA	141551433	141653831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_141551500_141555452_141555568_141593145_141593186_141596561_141596642_141601204_141601281_141611194_141611288_141614145_141614179_141615470_141615566_141621731_141621802_141633900_141633981_141636959_141637018_141641247_141641399_141641810_141641909_141649262_141649334_141651524_141651610_141652786
transcript_184760.known	chr7	+	1046	3	FSM	ENSG00000006530.18	ENST00000492693.5	1046	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	153	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGATCCCCGTCCCAAGCC	141555438	True	NA	NA	False	AATAAA	-19	NA	141555452	141594195	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_141555568_141593145_141593186_141593304
transcript_184764.known	chr7	-	7309	9	FSM	ENSG00000257093.7	ENST00000536163.6	7309	9	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	23.0647864720227	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGCGTGCTGCAATCCCTT	NA	False	NA	-12	True	ATTAAA	-20	NA	141702166	141656727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_141662852_141664171_141664241_141664903_141665055_141665186_141665319_141666286_141666426_141674066_141674221_141685477_141685637_141686558_141686659_141701885
transcript_184766.known	chr7	-	770	2	FSM	ENSG00000244701.1	ENST00000467537.1	770	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTATTGTATCTGCTGG	-141656796	False	NA	-11	True	AATAAA	-27	NA	141656810	141652380	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_141652884_141656543
transcript_184767.known	chr7	+	517	8	FSM	ENSG00000106028.11	ENST00000465167.1	517	8	0	0	0	0	multi-exon	FALSE	canonical	1	14	junction_2	1689.61244197645	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGACGAAAGAGAAGGAGT	141680536	True	NA	-1	True	NA	NA	NA	141738405	141750332	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_141738411_141739123_141739191_141741748_141741793_141742168_141742230_141743560_141743702_141743901_141743990_141745495_141745585_141750310
transcript_184772.known	chr7	+	677	7	FSM	ENSG00000106028.11	ENST00000265304.11	677	7	0	0	0	0	multi-exon	FALSE	canonical	3	1963	junction_1	723.73544890381	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTCGCTCTCCTTTTTGT	141680488	True	NA	43	True	NA	NA	NA	141738357	141750488	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_141738411_141739123_141739191_141742168_141742230_141743560_141743702_141743901_141743990_141745495_141745585_141750310
transcript_184777.known	chr7	+	636	7	FSM	ENSG00000106028.11	ENST00000498107.5	636	7	0	0	0	0	multi-exon	FALSE	canonical	3	1072	junction_1	1050.67038123286	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGATGATTCTTCTTTGG	141680488	True	NA	21	True	NA	NA	NA	141738357	141750354	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_141738504_141739123_141739191_141742168_141742230_141743560_141743702_141743901_141743990_141745495_141745585_141750310
transcript_184782.known	chr7	+	630	7	FSM	ENSG00000106028.11	ENST00000467681.5	630	7	0	0	0	0	multi-exon	FALSE	canonical	3	383	junction_1	1305.25931863706	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATATTTCTGAGTGACC	141680526	True	NA	-19	True	NA	NA	NA	141738395	141750314	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_141738576_141739123_141739191_141742168_141742230_141743560_141743702_141743901_141743990_141745495_141745585_141750310
transcript_184783.known	chr7	+	1434	6	FSM	ENSG00000106028.11	ENST00000489378.5	1434	6	0	0	0	0	multi-exon	FALSE	canonical	3	1963	junction_1	792.616275381726	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAGATGAGGTTTCACCA	141680495	True	NA	NA	False	NA	NA	NA	141738364	141746526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_141738411_141739123_141739191_141742168_141742230_141743560_141743702_141743901_141743990_141745495
transcript_184789.known	chr7	+	800	2	FSM	ENSG00000106028.11	ENST00000468267.1	800	2	0	0	0	0	multi-exon	FALSE	canonical	3	383	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGATTCTTCTTTGGCTCT	141680539	True	NA	NA	False	NA	NA	NA	141738408	141739756	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_141738576_141739123
transcript_184791.known	chr7	+	662	8	FSM	ENSG00000106028.11	ENST00000469123.5	662	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1692.95269169771	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATGAGTAATAATCTTT	141680521	True	NA	11	True	ATTAAA	-14	NA	141738390	141750456	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_141738411_141739123_141739191_141741748_141741799_141742168_141742230_141743560_141743702_141743901_141743990_141745495_141745585_141750310
transcript_184792.known	chr7	+	2620	2	FSM	ENSG00000106028.11	ENST00000496622.1	2620	2	0	0	0	0	multi-exon	FALSE	canonical	3	1963	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAGGATGTATATATTGA	141680488	True	NA	NA	False	AATATA	-27	NA	141738357	141741690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_141738411_141739123
transcript_184795.nnic	chr7	+	867	5	Fusion	ENSG00000211764.1_ENSG00000211772.11	novel	758	4	NA	NA	-59	0	multi-exon	FALSE	canonical	3	76	junction_1	20.3224014329016	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTGTCTGTGGAGTTC	NA	False	NA	18	True	AATAAA	-29	NA	142796305	142802748	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr7_+_142796415_142801040_142801428_142801943_142801962_142802104_142802212_142802502
transcript_184798.nnic	chr7	+	1038	5	Fusion	ENSG00000211767.1_ENSG00000211772.11_ENSG00000211768.1	novel	758	4	NA	NA	-79	0	multi-exon	FALSE	canonical	3	17	junction_1	45.8059766842712	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTGTCTGTGGAGTTC	142796744	False	NA	18	True	AATAAA	-29	NA	142796767	142802748	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr7_+_142797048_142801040_142801428_142801943_142801962_142802104_142802212_142802502
transcript_184799.known	chr7	+	758	4	FSM	ENSG00000211772.11	ENST00000466254.1	758	4	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	2.49443825784929	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTGTCTGTGGAGTTC	142801030	False	NA	18	True	AATAAA	-29	NA	142801040	142802748	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_142801428_142801943_142801962_142802104_142802212_142802502
transcript_184805.known	chr7	+	3999	20	FSM	ENSG00000106123.12	ENST00000652003.1	3999	20	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	14.9573724861605	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGGTGTGGTGAGGCCT	142855050	False	NA	11	True	ATTAAA	-21	NA	142855075	142871093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_142855386_142861051_142861187_142862016_142862134_142862755_142862834_142863126_142863328_142863630_142863696_142863965_142864750_142865474_142865631_142865959_142866317_142866480_142866606_142866905_142867069_142867607_142867723_142867996_142868050_142868240_142868361_142868491_142868740_142868973_142869148_142869816_142869967_142870213_142870408_142870529_142870686_142870795
transcript_184813.known	chr7	+	3861	19	FSM	ENSG00000106123.12	ENST00000614832.4	3861	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	23.4950086635176	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCAGGTTTGGTGTGGTG	142855117	False	NA	5	True	ATTAAA	-15	NA	142855142	142871087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_142855386_142861051_142861187_142862016_142862134_142862755_142862834_142863126_142863328_142863965_142864750_142865474_142865631_142865959_142866317_142866480_142866606_142866905_142867069_142867607_142867723_142867996_142868050_142868240_142868361_142868491_142868740_142868973_142869148_142869816_142869967_142870213_142870408_142870529_142870686_142870795
transcript_184815.nnic	chr7	+	4674	19	NIC	ENSG00000106123.12	novel	3999	20	NA	NA	-777	0	intron_retention	TRUE	canonical	3	30	junction_2	16.5242993538547	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGGTGTGGTGAGGCCT	142854258	False	NA	11	True	ATTAAA	-21	NA	142854283	142871093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_142855386_142861051_142861187_142862755_142862834_142863126_142863328_142863630_142863696_142863965_142864750_142865474_142865631_142865959_142866317_142866480_142866606_142866905_142867069_142867607_142867723_142867996_142868050_142868240_142868361_142868491_142868740_142868973_142869148_142869816_142869967_142870213_142870408_142870529_142870686_142870795
transcript_18482.known	chr1	+	3031	8	FSM	ENSG00000163444.12	ENST00000367242.4	3031	8	0	0	0	0	multi-exon	FALSE	canonical	3	1032	junction_3	189.042269325769	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGACTCAGCTCTGAGTT	202986615	True	NA	NA	False	AATAAA	-19	NA	203007373	203024848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_203007575_203007773_203007864_203008642_203008811_203014888_203015049_203015959_203016141_203018480_203018562_203020792_203020949_203022854
transcript_184825.known	chr7	+	584	4	FSM	ENSG00000106123.12	ENST00000497095.5	584	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	29.3295452099452	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAGAAAGAACTGGAATAA	142855078	False	NA	NA	False	AGTAAA	-3	NA	142855103	142862788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_142855386_142861051_142861187_142861999_142862134_142862755
transcript_184827.known	chr7	-	2906	15	FSM	ENSG00000165125.22	ENST00000359396.9	2906	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.64130361329658	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCTGCCCTTCTGCAT	NA	False	NA	-1	True	AATAAA	-18	NA	142885745	142871207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_142871990_142872371_142872479_142873447_142873717_142874075_142874143_142874490_142874657_142874903_142874981_142875077_142875165_142875467_142875681_142875757_142875905_142876407_142876584_142876738_142876838_142877141_142877280_142877650_142877774_142877928_142878027_142885388
transcript_184829.known	chr7	-	2494	19	FSM	ENSG00000197993.9	ENST00000355265.7	2494	19	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_13	3.2867109906109	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGTTCCTGCTATGTT	NA	False	NA	2	True	AATAAA	-32	NA	142962363	142941113	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_142941414_142942433_142942530_142942874_142943045_142943275_142943344_142943485_142943597_142943782_142943884_142944322_142944401_142944642_142944742_142946206_142946318_142952508_142952639_142953807_142953957_142954183_142954373_142954464_142954528_142957826_142957974_142958303_142958429_142960927_142961105_142961359_142961502_142961794_142961873_142962203
transcript_184831.known	chr7	+	1032	8	FSM	ENSG00000197448.14	ENST00000358406.10	1032	8	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_4	27.6028688245794	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGTCTGTATCTGCC	143260842	True	NA	22	True	AATAAA	-23	NA	143263440	143269115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_143263586_143264085_143264168_143264547_143264677_143264991_143265093_143265260_143265297_143267616_143267734_143268090_143268185_143268787
transcript_184832.known	chr7	+	1185	7	FSM	ENSG00000197448.14	ENST00000479303.1	1185	7	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_3	24.2653158964716	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGTCTGTATCTGCC	143260857	True	NA	22	True	AATAAA	-23	NA	143263455	143269115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_143263586_143264085_143264168_143264547_143264677_143264991_143265297_143267616_143267734_143268090_143268185_143268787
transcript_184833.known	chr7	+	850	7	FSM	ENSG00000197448.14	ENST00000443571.6	850	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	97.6638224841841	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCCCAATTCTGCTTTCC	143260842	True	NA	-31	True	NA	NA	NA	143263440	143269062	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_143263586_143264085_143264168_143264991_143265093_143265260_143265297_143267616_143267734_143268090_143268185_143268787
transcript_184834.nic	chr7	+	1474	6	NIC	ENSG00000197448.14	novel	1185	7	NA	NA	-5	0	intron_retention	FALSE	canonical	3	234	junction_3	21.8723569831877	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGTCTGTATCTGCC	143260883	True	NA	22	True	AATAAA	-23	NA	143263481	143269115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_143263586_143264085_143264168_143264547_143265297_143267616_143267734_143268090_143268185_143268787
transcript_184836.nic	chr7	+	1888	5	NIC	ENSG00000197448.14	novel	1185	7	NA	NA	-3	0	intron_retention	FALSE	canonical	3	234	junction_2	24.0416305603426	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGTCTGTATCTGCC	143260849	True	NA	22	True	AATAAA	-23	NA	143263447	143269115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_143263586_143264085_143265297_143267616_143267734_143268090_143268185_143268787
transcript_184842.known	chr7	+	4089	11	FSM	ENSG00000106144.20	ENST00000310447.10	4089	11	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_10	9.95238664843765	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGCTCAATATCTGTTT	143286045	True	NA	19	True	AATAAA	-20	NA	143288350	143307696	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_143288530_143291539_143291691_143292299_143292468_143292616_143292699_143294229_143294325_143294596_143294774_143299922_143300052_143300203_143300295_143303783_143303934_143304673_143304784_143304939
transcript_184848.nic	chr7	+	2784	7	ISM	ENSG00000188037.14	ENST00000432192.6	2560	23	25862	-2126	24191	1777	3prime_fragment	FALSE	canonical	3	10	junction_4	1.37436854187255	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGCACCCCCCCTCCAAA	143345553	True	NA	NA	False	AATAAA	-16	NA	143345668	143353860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_143345763_143346139_143346252_143346578_143346659_143346910_143346950_143350371_143350477_143350567_143350655_143351593
transcript_184853.known	chr7	-	4343	7	FSM	ENSG00000159784.18	ENST00000443739.7	4343	7	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	6.72474700061067	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGACTGTGAGTGTCT	-143361994	True	NA	-9	True	ACTAAA	-16	NA	143362713	143353399	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_143357023_143357279_143357424_143358826_143359025_143359325_143359420_143359731_143359768_143360039_143360150_143362575
transcript_184854.known	chr7	-	4295	7	FSM	ENSG00000159784.18	ENST00000409346.5	4295	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	46.973101049667	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTCTGACTGTGAGTGTC	-143362006	True	NA	-10	True	ACTAAA	-15	NA	143362725	143353400	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_143357023_143357279_143357424_143358826_143359025_143359325_143359420_143359731_143359768_143360039_143360150_143362634
transcript_184858.known	chr7	-	4286	6	FSM	ENSG00000159784.18	ENST00000409578.5	4286	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	51.1804650232879	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTCTGACTGTGAGTGTC	-143361974	True	NA	-10	True	ACTAAA	-15	NA	143362693	143353400	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_143357023_143357279_143357424_143358826_143359025_143359325_143359420_143360039_143360150_143362575
transcript_184864.nnic	chr7	+	740	3	Genic_Genomic	ENSG00000272619.1	novel	331	1	NA	NA	-2104	80	multi-exon	FALSE	canonical	0	0	junction_1	8.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTTCCATTATTCTAGCA	143361769	False	NA	83	True	ATTAAA	-19	NA	143361794	143364309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Genic_Genomic_chr7_+_143362058_143363189_143363258_143363900
transcript_184865.known	chr7	-	648	2	FSM	ENSG00000232533.2	ENST00000429630.2	1186	2	535	3	-241	0	multi-exon	FALSE	canonical	3	72	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGCTATATGACTCAGTAT	-143380485	False	NA	-11	True	AATAAA	-19	NA	143380495	143379691	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_143380110_143380265
transcript_184869.nnic	chr7	+	694	4	NNC	ENSG00000229153.6	novel	529	3	NA	NA	3022	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	24.7296493213219	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTGATTTCTTGAGT	143410330	True	NA	9	True	AATAAA	-23	NA	143410834	143415830	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_143410981_143414323_143414446_143415067_143415200_143415536
transcript_184870.known	chr7	+	484	3	FSM	ENSG00000229153.6	ENST00000421648.2	516	3	29	3	20	0	multi-exon	FALSE	canonical	3	16	junction_1	33.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTGATTTCTTGAGT	143407699	False	NA	9	True	AATAAA	-23	NA	143407832	143415830	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_143407891_143415067_143415200_143415536
transcript_184921.known	chr7	-	3310	18	FSM	ENSG00000146904.9	ENST00000275815.4	3310	18	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_12	63.0751186145162	1286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTGACTACTGAGAATTC	-143400254	True	NA	-6	True	NA	NA	NA	143408856	143391128	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_143391536_143391619_143391776_143393670_143393865_143394193_143394344_143394807_143395015_143395120_143395183_143395318_143395505_143396384_143396511_143397303_143397363_143397560_143397658_143397919_143398071_143398320_143398449_143398600_143398946_143399257_143399414_143399650_143400054_143401323_143401606_143407610_143407679_143408723
transcript_184926.nnic	chr7	-	3128	18	NNC	ENSG00000146904.9	novel	3310	18	NA	NA	-55	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_12	147.35520721517	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTGACTACTGAGAATTC	NA	False	NA	-6	True	NA	NA	NA	143408911	143391128	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_143391536_143391619_143391776_143393670_143393865_143394193_143394344_143394807_143395015_143395120_143395183_143395318_143395505_143396384_143396511_143397303_143397363_143397560_143397658_143397919_143398071_143398320_143398449_143398837_143398946_143399257_143399414_143399650_143400054_143401323_143401606_143407610_143407679_143408723
transcript_18497.nic	chr1	+	444	3	ISM	ENSG00000163444.12	ENST00000367242.4	3031	8	0	16053	0	-6777	5prime_fragment	FALSE	canonical	3	1478	junction_1	55.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGAGACACAAAGGTATG	202986615	True	NA	NA	False	AAAAAG	-5	NA	203007373	203008795	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_203007575_203007773_203007864_203008642
transcript_184995.known	chr7	+	2228	10	FSM	ENSG00000159840.16	ENST00000322764.10	2228	10	0	0	0	0	multi-exon	FALSE	canonical	3	591	junction_1	224.438448764802	1818	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCAGTAGTCAGCTCTTT	143367478	True	NA	17	True	AATAAA	-22	NA	143381344	143391111	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_143381410_143381556_143381780_143382247_143382448_143382592_143382686_143382800_143383323_143388218_143388340_143388488_143388659_143388766_143388946_143389856_143389978_143390577
transcript_18502.known	chr1	+	653	3	FSM	ENSG00000163485.17	ENST00000640524.1	653	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATCCTGAAGACTCAGCC	203127632	True	NA	NA	False	ACTAAA	-4	NA	203127707	203165089	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_203127929_203128784_203129183_203165055
transcript_185025.known	chr7	-	3343	9	FSM	ENSG00000198420.10	ENST00000355951.2	3343	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_8	36.5083466484036	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCCGGTCAGCTAATTCT	-143900204	True	NA	NA	False	NA	NA	NA	143902126	143853695	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_143854143_143857073_143857351_143858823_143859162_143860207_143860448_143861094_143861309_143862415_143862514_143862801_143863797_143875988_143876623_143902026
transcript_185028.known	chr7	-	5754	9	FSM	ENSG00000198420.10	ENST00000479870.6	5754	9	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_8	23.0162985729678	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTGACTTCACATTGATT	-143900254	True	NA	NA	False	AATAAA	-17	NA	143902176	143851374	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_143854143_143857099_143857351_143858823_143859162_143860207_143860448_143861094_143861309_143862415_143862514_143862801_143863797_143875988_143876623_143901960
transcript_18503.known	chr1	+	3407	3	FSM	ENSG00000163485.17	ENST00000367236.8	3407	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAGCACATTGCTGGGC	NA	False	NA	3	True	AATAAA	-16	NA	203127064	203167405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_203127929_203128784_203129183_203165260
transcript_185034.nic	chr7	-	4236	9	NIC	ENSG00000198420.10	novel	5754	9	NA	NA	7	762	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	29.8663690461362	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACATAGACAATCAATATGT	-143900269	False	NA	NA	False	TATAAA	-12	NA	143902191	143852933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_143854143_143857073_143857351_143858823_143859162_143860207_143860448_143861094_143861309_143862415_143862514_143862801_143863797_143875988_143876623_143901960
transcript_18504.known	chr1	+	2219	3	FSM	ENSG00000163485.17	ENST00000367235.1	2219	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	6	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGGCCTGCCCGTTGCCG	203128135	True	NA	NA	False	NA	NA	NA	203128305	203166749	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_203128433_203128784_203129183_203165055
transcript_18505.nic	chr1	+	2703	3	ISM	ENSG00000163485.17	ENST00000337894.9	2901	4	547	0	-33	0	3prime_fragment	FALSE	canonical	3	9	junction_2	2.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAGCACATTGCTGGGC	203128102	True	NA	3	True	AATAAA	-16	NA	203128272	203167405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_203128433_203128784_203129183_203165260
transcript_185053.nic	chr7	-	2905	8	ISM	ENSG00000198420.10	ENST00000355951.2	3343	9	-65	3434	7	-3302	5prime_fragment	FALSE	canonical	3	20	junction_7	32.9229155353371	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATGAAATTGTACCTCC	-143900269	False	NA	NA	False	NA	NA	NA	143902191	143857129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_143857351_143858823_143859162_143860207_143860448_143861094_143861309_143862415_143862514_143862801_143863797_143875988_143876623_143902026
transcript_185059.nnic	chr7	-	1782	4	NIC	ENSG00000244479.7	novel	568	4	NA	NA	-42	1196	combination_of_known_junctions	FALSE	canonical	3	190	junction_1	221.284633196453	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCTGTTAATTCAAGTCC	NA	False	NA	NA	False	AGTAAA	-15	NA	144355562	144299198	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_144300537_144343186_144343299_144350717_144350825_144355337
transcript_185062.nnic	chr7	-	1574	3	NIC	ENSG00000244479.7	novel	531	5	NA	NA	-77	1060	combination_of_known_junctions	FALSE	canonical	3	190	junction_1	257.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCAGCTGTGTGACACGC	NA	False	NA	NA	False	ACTAAA	-27	NA	144355597	144299334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_144300537_144343186_144343299_144355337
transcript_185088.known	chr7	+	819	6	FSM	ENSG00000244198.7	ENST00000464929.5	819	6	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_3	180.666543665395	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACCCAGTCTGTGATA	144195343	False	NA	NA	False	AATAAA	-15	NA	144195353	144243831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_144195702_144200170_144200278_144207692_144207805_144239042_144239096_144239274_144239389_144243746
transcript_18509.known	chr1	+	2729	2	FSM	ENSG00000159388.6	ENST00000290551.5	2729	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGTGGTGTAGAGAAGT	203304640	True	NA	15	True	AATAAA	-17	NA	203305518	203309602	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_203305749_203307103
transcript_185096.nic	chr7	+	599	5	NIC	ENSG00000244198.7	novel	531	5	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	171	junction_2	199.123077517399	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCAGTCTGTGATATTCT	144195463	False	NA	NA	False	AATAAA	-19	NA	144195473	144243835	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_144195702_144207692_144207805_144239039_144239096_144239274_144239389_144243746
transcript_185097.known	chr7	+	531	5	FSM	ENSG00000244198.7	ENST00000493248.5	531	5	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_4	224.487611016733	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATGCAACACATCTAAAA	144195508	False	NA	NA	False	AATAAA	-43	NA	144195518	144250505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_144195702_144207692_144207805_144239039_144239096_144239274_144239389_144250439
transcript_18510.known	chr1	+	5769	3	FSM	ENSG00000188783.6	ENST00000343110.3	5769	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCGCTTC	203475779	True	NA	NA	False	AATAAA	-22	NA	203475805	203491352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_203475939_203483168_203484158_203486705
transcript_185100.nic	chr7	+	610	5	NIC	ENSG00000244198.7	novel	819	6	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	196	junction_2	192.658214203288	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCAGTCTGTGATATTCT	144195449	False	NA	NA	False	AATAAA	-19	NA	144195459	144243835	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_144195702_144207692_144207805_144239042_144239096_144239274_144239389_144243746
transcript_185102.nnic	chr7	+	687	5	NIC	ENSG00000244198.7	novel	819	6	NA	NA	-56	0	combination_of_known_splicesites	FALSE	canonical	3	286	junction_3	182.558723428928	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCAGTCTGTGATATTCT	144195426	False	NA	NA	False	AATAAA	-19	NA	144195436	144243835	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_144195702_144200170_144200278_144207692_144207805_144239274_144239389_144243746
transcript_18511.known	chr1	+	1434	8	FSM	ENSG00000188770.10	ENST00000367222.7	1434	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.39970842444753	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGAGCCCACACAGAACG	203494108	True	NA	88	True	NA	NA	NA	203494152	203508949	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_203494218_203495964_203496237_203496976_203497116_203498680_203498840_203499648_203499852_203502913_203503010_203503549_203503746_203508645
transcript_185112.nnic	chr7	+	563	4	NIC	ENSG00000244198.7	novel	819	6	NA	NA	-39	0	combination_of_known_splicesites	FALSE	canonical	3	286	junction_2	195.080040553159	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCAGTCTGTGATATTCT	144195443	False	NA	NA	False	AATAAA	-19	NA	144195453	144243835	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_144195702_144207692_144207805_144239274_144239389_144243746
transcript_185114.nnic	chr7	+	1818	4	NIC	ENSG00000244198.7	novel	531	5	NA	NA	-45	1196	combination_of_known_splicesites	FALSE	canonical	3	148	junction_3	238.675511940375	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCTGTTAATTCAAGTCC	144195437	False	NA	NA	False	AGTAAA	-15	NA	144195447	144251777	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_144195702_144207692_144207805_144239274_144239389_144250439
transcript_185116.known	chr7	+	773	4	FSM	ENSG00000244198.7	ENST00000474656.5	773	4	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_1	165.572407792549	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGACAAAAATGCTGATACT	144195347	False	NA	NA	False	AAGAAA	-44	NA	144195357	144214223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_144195702_144200170_144200278_144207692_144207805_144214013
transcript_185121.nnic	chr7	+	2402	4	NIC	ENSG00000244198.7	novel	556	3	NA	NA	-86	-717	combination_of_known_splicesites	FALSE	canonical	3	278	junction_1	186.935520671939	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTTTGGGTATGTCTTT	NA	False	NA	NA	False	AATGAA	-15	NA	144195801	144215940	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_144196058_144200170_144200278_144207692_144207805_144214013
transcript_185123.nic	chr7	+	2438	3	NIC	ENSG00000244198.7	novel	3412	5	NA	NA	-18	-717	combination_of_known_junctions	FALSE	canonical	3	584	junction_2	62.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTTTGGGTATGTCTTT	144195292	False	NA	NA	False	AATGAA	-15	NA	144195302	144215940	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_144195702_144207692_144207805_144214013
transcript_185125.known	chr7	+	4894	3	FSM	ENSG00000244198.7	ENST00000663681.1	4894	3	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_2	260	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAATATACTGTGCTATAC	NA	False	NA	-22	True	ATTAAA	-42	NA	144195596	144255116	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_144195702_144207692_144207805_144250439
transcript_185131.nic	chr7	+	2293	3	NIC	ENSG00000244198.7	novel	556	3	NA	NA	-84	-717	combination_of_known_junctions	FALSE	canonical	3	172	junction_1	206	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTTTGGGTATGTCTTT	NA	False	NA	NA	False	AATGAA	-15	NA	144195803	144215940	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_144196058_144207692_144207805_144214013
transcript_185132.nic	chr7	+	3102	3	NIC	ENSG00000244198.7	novel	556	3	NA	NA	115	0	combination_of_known_junctions	FALSE	canonical	3	172	junction_1	206	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTATATATTTATGAGTA	NA	False	NA	NA	False	ATTAAA	-13	NA	144195711	144216657	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_144196058_144207692_144207805_144214013
transcript_185140.known	chr7	-	2609	2	FSM	ENSG00000213214.6	ENST00000378115.3	2609	2	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_1	0	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCATATTCAAACCATCT	NA	False	NA	NA	False	AATAAA	-22	NA	144195833	144186082	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_144188396_144195537
transcript_185143.nnic	chr7	-	935	2	NNC	ENSG00000204959.4	novel	4532	12	NA	NA	-7267	-13715	at_least_one_novel_splicesite	FALSE	canonical	3	678	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAGAACAGAAGCAAAAACA	NA	False	NA	NA	False	NA	NA	NA	144294233	144286159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_144286979_144294117
transcript_185144.known	chr7	-	2588	1	FSM	ENSG00000289604.1	ENST00000487179.2	2615	1	0	27	0	-27	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTAAATAAAGATGGTTTGA	-144269277	False	NA	NA	False	NA	NA	NA	144269288	144266700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_144266700_144269300
transcript_185163.known	chr7	-	819	6	FSM	ENSG00000244479.7	ENST00000486094.5	819	6	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_3	173.525790590333	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACCCAGTCTGTGATA	NA	False	NA	NA	False	AATAAA	-15	NA	144355685	144307147	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_144307233_144311590_144311705_144311883_144311937_144343186_144343299_144350717_144350825_144355337
transcript_18517.known	chr1	+	5015	20	FSM	ENSG00000058673.17	ENST00000332127.8	5015	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	138.617930831197	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGTTGTGAGCTAAGTA	203787344	True	NA	8	True	AATAAA	-18	NA	203795705	203854124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_203795795_203796292_203796497_203801574_203801629_203802651_203803017_203816925_203817125_203818569_203818690_203828298_203828423_203829450_203829655_203829779_203829897_203830122_203830204_203831660_203831772_203833790_203833854_203837965_203838065_203840305_203840375_203847183_203847688_203848330_203848408_203849710_203850027_203850514_203850682_203851056_203851125_203852140
transcript_185176.known	chr7	-	531	5	FSM	ENSG00000244479.7	ENST00000496968.5	531	5	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	221.876091546611	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATGCAACACATCTAAAA	NA	False	NA	NA	False	AATAAA	-43	NA	144355520	144300470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_144300537_144311590_144311705_144311883_144311940_144343186_144343299_144355337
transcript_185181.nic	chr7	-	610	5	NIC	ENSG00000244479.7	novel	819	6	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	3	200	junction_3	188.703967896809	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTCTGTGATATTC	NA	False	NA	NA	False	AATAAA	-18	NA	144355580	144307144	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_144307233_144311590_144311705_144311883_144311937_144343186_144343299_144355337
transcript_185184.nic	chr7	-	586	5	NIC	ENSG00000244479.7	novel	819	6	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	173	junction_3	195.843687669529	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTCTGTGATATTC	NA	False	NA	NA	False	AATAAA	-18	NA	144355553	144307144	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_144307233_144311590_144311705_144311883_144311940_144343186_144343299_144355337
transcript_185186.nic	chr7	-	793	5	NIC	ENSG00000244479.7	novel	819	6	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	284	junction_2	175.909600363368	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTCTGTGATATTC	NA	False	NA	NA	False	AATAAA	-18	NA	144355709	144307144	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_144307233_144311590_144311705_144343186_144343299_144350717_144350825_144355337
transcript_185192.nnic	chr7	-	2562	5	NNC	ENSG00000244479.7	novel	773	4	NA	NA	-49	1720	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_4	294.787529417375	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGGTATGTCTTTATC	-144355123	False	145	NA	False	AATGAA	-18	NA	144355268	144335047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_144336978_144343186_144343299_144350717_144350825_144351119_144351246_144354981
transcript_185195.nic	chr7	-	2611	5	NIC	ENSG00000244479.7	novel	602	4	NA	NA	87	1720	combination_of_known_junctions	FALSE	canonical	3	53	junction_3	287.392914839597	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGGTATGTCTTTATC	-144355169	False	NA	NA	False	AATGAA	-18	NA	144355314	144335047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_144336978_144343186_144343299_144350717_144350825_144354031_144354161_144354981
transcript_185202.nic	chr7	-	1807	4	NIC	ENSG00000244479.7	novel	531	5	NA	NA	-60	1196	combination_of_known_junctions	FALSE	canonical	3	151	junction_1	236.136965904677	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCTGTTAATTCAAGTCC	NA	False	NA	NA	False	AGTAAA	-15	NA	144355580	144299198	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_144300537_144311590_144311705_144343186_144343299_144355337
transcript_185211.nic	chr7	-	579	4	NIC	ENSG00000244479.7	novel	819	6	NA	NA	79	0	combination_of_known_junctions	FALSE	canonical	3	284	junction_2	191.991319248206	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTCTGTGATATTC	NA	False	NA	NA	False	AATAAA	-18	NA	144355602	144307144	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_144307233_144311590_144311705_144343186_144343299_144355337
transcript_185214.nnic	chr7	-	3166	4	NIC	ENSG00000244479.7	novel	773	4	NA	NA	-57	2442	combination_of_known_splicesites	FALSE	canonical	3	277	junction_3	177.571268947303	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTATGAGTAATATGGTA	-144355131	False	NA	NA	False	ATTAAA	-21	NA	144355276	144334325	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_144336978_144343186_144343299_144350717_144350825_144354981
transcript_185216.known	chr7	-	773	4	FSM	ENSG00000244479.7	ENST00000462305.5	773	4	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_3	159.223113899961	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGACAAAAATGCGGATACT	NA	False	NA	NA	False	AAGAAA	-44	NA	144355681	144336767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_144336978_144343186_144343299_144350717_144350825_144355337
transcript_185219.nnic	chr7	-	2501	4	NIC	ENSG00000244479.7	novel	773	4	NA	NA	68	1720	combination_of_known_splicesites	FALSE	canonical	3	277	junction_3	177.571268947303	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGGTATGTCTTTATC	-144355188	False	NA	NA	False	AATGAA	-18	NA	144355333	144335047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_144336978_144343186_144343299_144350717_144350825_144354981
transcript_185228.nic	chr7	-	2766	3	NIC	ENSG00000244479.7	novel	531	5	NA	NA	-55	2274	intron_retention	FALSE	canonical	3	190	junction_1	257.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCTGGCTTATGCATTTT	NA	False	NA	NA	False	AATAAA	-13	NA	144355575	144298120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_144300537_144343186_144343299_144355337
transcript_185230.nic	chr7	-	1680	3	NIC	ENSG00000244479.7	novel	531	5	NA	NA	-47	1196	combination_of_known_junctions	FALSE	canonical	3	190	junction_1	257.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCTGTTAATTCAAGTCC	NA	False	NA	NA	False	AGTAAA	-15	NA	144355567	144299198	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_144300537_144343186_144343299_144355337
transcript_185232.nic	chr7	-	3059	3	NIC	ENSG00000244479.7	novel	773	4	NA	NA	-57	2442	combination_of_known_junctions	FALSE	canonical	3	172	junction_2	173.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTATGAGTAATATGGTA	-144355131	False	NA	NA	False	ATTAAA	-21	NA	144355276	144334325	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_144336978_144343186_144343299_144354981
transcript_185233.nic	chr7	-	3181	3	NIC	ENSG00000244479.7	novel	773	4	NA	NA	-51	2442	combination_of_known_junctions	FALSE	canonical	3	519	junction_1	93	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTATGAGTAATATGGTA	NA	False	NA	NA	False	ATTAAA	-21	NA	144355754	144334325	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_144336978_144343186_144343299_144355337
transcript_185234.nic	chr7	-	2337	3	NIC	ENSG00000244479.7	novel	773	4	NA	NA	-57	1720	combination_of_known_junctions	FALSE	canonical	3	172	junction_2	173.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGGTATGTCTTTATC	-144355131	False	NA	NA	False	AATGAA	-18	NA	144355276	144335047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_144336978_144343186_144343299_144354981
transcript_185236.nic	chr7	-	2459	3	NIC	ENSG00000244479.7	novel	773	4	NA	NA	-51	1720	combination_of_known_junctions	FALSE	canonical	3	519	junction_1	93	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGGTATGTCTTTATC	NA	False	NA	NA	False	AATGAA	-18	NA	144355754	144335047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_144336978_144343186_144343299_144355337
transcript_185238.known	chr7	+	5482	15	FSM	ENSG00000050327.15	ENST00000056217.10	5482	15	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_13	176.289013629695	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTCTCAAACTCCTCA	144344241	True	NA	12	True	AATAAA	-20	NA	144355401	144380632	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_144355502_144362657_144365824_144366354_144366413_144366845_144366911_144367101_144367356_144371160_144371322_144371876_144372030_144372298_144372429_144372682_144372758_144373194_144373285_144374731_144374890_144375513_144375676_144377119_144377191_144378761_144378867_144379898
transcript_185239.known	chr7	-	2439	9	FSM	ENSG00000196511.15	ENST00000360057.7	2439	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	2.10653744329409	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTTCCTGAAGCTTAG	-144836040	False	NA	NA	False	AATAAA	-22	NA	144836053	144451940	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_144453664_144548490_144548603_144591422_144591570_144623165_144623262_144648806_144648880_144682908_144682979_144765879_144765952_144835559_144835619_144835966
transcript_185241.known	chr7	-	521	2	FSM	ENSG00000196511.15	ENST00000548460.2	521	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAAGTGTTTTAAATCTA	-144835654	True	NA	NA	False	AATAAA	-18	NA	144835999	144835130	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_144835619_144835966
transcript_185243.known	chr7	+	6076	4	FSM	ENSG00000174469.23	ENST00000463592.3	6076	4	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_2	18.1536650722535	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGATTCTTCGTGTTTTGTA	NA	False	NA	25	True	AATAAA	-31	NA	148339460	148420998	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_148339634_148383648_148383889_148409390_148409472_148415416
transcript_185251.known	chr7	+	3086	22	FSM	ENSG00000055130.18	ENST00000662716.1	3086	22	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	122.473505858158	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTTTAATGTGTGAAAA	NA	False	NA	4	True	NA	NA	NA	148698071	148800988	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_148698260_148729961_148730263_148753975_148754151_148756982_148757151_148759303_148759355_148759547_148759639_148760332_148760497_148766560_148766724_148767618_148767750_148783782_148783891_148783970_148784078_148786550_148786600_148786988_148787121_148788556_148788675_148789749_148789827_148790309_148790442_148792725_148792819_148797811_148797860_148797936_148798020_148798571_148798678_148799274_148799389_148800501
transcript_185253.known	chr7	+	2857	22	FSM	ENSG00000055130.18	ENST00000409469.5	2857	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	127.757920176404	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTCTGGAAGGGTCTGAC	NA	False	NA	NA	False	NA	NA	NA	148697913	148800582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_148698279_148729961_148730263_148753975_148754151_148756982_148757151_148759303_148759355_148759547_148759639_148760332_148760497_148766560_148766724_148767618_148767750_148783782_148783891_148783970_148784078_148786550_148786600_148786988_148787121_148788556_148788675_148789749_148789827_148790309_148790442_148792725_148792819_148797811_148797860_148797936_148798020_148798571_148798678_148799274_148799389_148800501
transcript_185256.known	chr7	+	2938	22	FSM	ENSG00000055130.18	ENST00000665936.1	2938	22	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	124.034941313594	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAGAAAATTAAAGG	148698485	False	NA	-12	True	NA	NA	NA	148698516	148801004	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_148698541_148729961_148730263_148753975_148754151_148756982_148757151_148759303_148759355_148759547_148759639_148760332_148760497_148766560_148766724_148767618_148767750_148783782_148783891_148783970_148784078_148786550_148786600_148786988_148787121_148788556_148788675_148789749_148789827_148790309_148790442_148792725_148792819_148797811_148797860_148797936_148798020_148798571_148798678_148799274_148799389_148800501
transcript_185258.known	chr7	+	3054	22	FSM	ENSG00000055130.18	ENST00000602748.5	3054	22	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	113.574633078481	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTACAAGTCGCATTG	148698484	True	NA	9	True	AATAAA	-14	NA	148698644	148801025	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_148698764_148729961_148730263_148753975_148754151_148756982_148757151_148759303_148759355_148759547_148759639_148760332_148760497_148766560_148766724_148767618_148767750_148783782_148783891_148783970_148784078_148786550_148786600_148786988_148787121_148788556_148788675_148789749_148789827_148790309_148790442_148792725_148792819_148797811_148797860_148797936_148798020_148798571_148798678_148799274_148799389_148800501
transcript_185260.known	chr7	+	3147	22	FSM	ENSG00000055130.18	ENST00000325222.9	3147	22	0	0	0	0	multi-exon	FALSE	canonical	3	455	junction_1	53.5740740087562	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCCTAGTGTCTTCCTGT	148692683	True	NA	24	True	AATAAA	-25	NA	148698902	148801110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_148699030_148729961_148730263_148753975_148754151_148756982_148757151_148759303_148759355_148759547_148759639_148760332_148760497_148766560_148766724_148767618_148767750_148783782_148783891_148783970_148784078_148786550_148786600_148786988_148787121_148788556_148788675_148789749_148789827_148790309_148790442_148792725_148792819_148797811_148797860_148797936_148798020_148798571_148798678_148799274_148799389_148800501
transcript_18527.known	chr1	+	3004	20	FSM	ENSG00000058673.17	ENST00000367212.7	3004	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	130.30564963527	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCGCCAAAAAACTGGACTTA	203787337	True	NA	NA	False	TTTAAA	-8	NA	203795698	203852430	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_203795776_203796292_203796497_203801574_203801629_203802956_203803017_203816925_203817125_203818569_203818690_203828298_203828423_203829450_203829655_203829779_203829897_203830122_203830204_203831660_203831772_203833790_203833854_203837965_203838065_203840305_203840375_203847183_203847688_203848330_203848408_203849710_203850027_203850514_203850682_203851056_203851125_203852140
transcript_185275.known	chr7	+	3080	21	FSM	ENSG00000055130.18	ENST00000662132.1	3080	21	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	125.588803242964	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATGATTGTGCAAATT	148692677	True	NA	2	True	AATAAA	-3	NA	148698896	148801088	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_148699030_148729961_148730263_148753975_148754151_148756982_148757151_148759547_148759639_148760332_148760497_148766560_148766724_148767618_148767750_148783782_148783891_148783970_148784078_148786550_148786600_148786988_148787121_148788556_148788675_148789749_148789827_148790309_148790442_148792725_148792819_148797811_148797860_148797936_148798020_148798571_148798678_148799274_148799389_148800501
transcript_185297.known	chr7	+	3056	22	FSM	ENSG00000055130.18	ENST00000662670.1	3056	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	128.306517208896	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGTACAAGTCGCATT	148692703	True	NA	8	True	AATAAA	-13	NA	148698922	148801024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_148699030_148729961_148730263_148753975_148754151_148756967_148757151_148759303_148759355_148759547_148759639_148760332_148760497_148766560_148766724_148767618_148767750_148783782_148783891_148783970_148784078_148786550_148786600_148786988_148787121_148788556_148788675_148789749_148789827_148790309_148790442_148792725_148792819_148797811_148797860_148797936_148798020_148798571_148798678_148799274_148799389_148800501
transcript_185301.known	chr7	-	2707	21	FSM	ENSG00000106462.12	ENST00000683744.1	2707	21	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_12	82.6671639769988	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTCAACTTTGAATAAA	-148877966	True	NA	-55	True	NA	NA	NA	148884314	148807419	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_148807707_148809070_148809156_148809309_148809391_148810332_148810415_148811624_148811721_148813958_148814138_148814913_148815040_148815505_148815547_148816683_148816779_148817221_148817392_148817876_148818118_148818977_148819060_148819595_148819688_148826468_148826633_148827163_148827267_148828739_148828881_148829727_148829849_148832633_148832751_148846469_148846599_148847181_148847306_148884163
transcript_185307.known	chr7	-	2591	20	FSM	ENSG00000106462.12	ENST00000460911.5	2591	20	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_17	54.9116136947327	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTTGAATCATCTCTC	-148877897	True	NA	-20	True	AATAAA	-16	NA	148884245	148807384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_148807707_148809070_148809156_148809309_148809391_148810332_148810415_148811624_148811721_148813958_148814138_148814913_148815040_148815505_148815547_148816683_148816779_148817221_148817392_148817876_148818118_148819595_148819688_148826468_148826633_148827163_148827267_148828739_148828881_148829727_148829849_148832633_148832751_148846469_148846599_148847181_148847306_148884163
transcript_185308.known	chr7	-	2466	20	FSM	ENSG00000106462.12	ENST00000483967.5	2466	20	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_17	71.9731020855897	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATAATTTATAGTAATGA	-148877939	True	NA	NA	False	AAAAAG	-40	NA	148884287	148807524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_148807707_148809070_148809156_148809309_148809391_148810332_148810415_148811624_148811721_148813958_148814138_148814913_148815040_148815505_148815547_148816683_148816779_148817221_148817392_148817876_148818118_148819595_148819688_148826468_148826633_148827163_148827267_148828739_148828881_148829727_148829849_148832633_148832751_148846496_148846599_148847181_148847306_148884163
transcript_185317.known	chr7	-	2477	19	FSM	ENSG00000106462.12	ENST00000350995.6	2477	19	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_16	76.496913517983	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTTGAATCATCTCTC	-148877900	True	NA	-20	True	AATAAA	-16	NA	148884248	148807384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_148807707_148809070_148809156_148809309_148809391_148810332_148810415_148811624_148811721_148813958_148814138_148814913_148815040_148815505_148815547_148816683_148816779_148817221_148817392_148817876_148818118_148819595_148819688_148826468_148826633_148827163_148827267_148828739_148828881_148829727_148829849_148846469_148846599_148847181_148847306_148884163
transcript_185322.known	chr7	-	3641	19	FSM	ENSG00000106462.12	ENST00000492143.5	3641	19	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_10	85.9249062040386	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTGAATCATCTCTCAT	-148877935	True	NA	-18	True	AATAAA	-18	NA	148884283	148807382	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_148807707_148809070_148809156_148809309_148809391_148810332_148810415_148811624_148811721_148813958_148814138_148814913_148815040_148815505_148815547_148816683_148818118_148818977_148819060_148819595_148819688_148826468_148826633_148827163_148827267_148828739_148828881_148829727_148829849_148832633_148832751_148846469_148846599_148847181_148847306_148884163
transcript_185325.nic	chr7	-	2428	18	NIC	ENSG00000106462.12	novel	2591	20	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_17	81.663246403439	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTTGAATCATCTCTC	-148877987	True	NA	-20	True	AATAAA	-16	NA	148884335	148807384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_148807707_148809070_148809156_148809309_148809391_148810332_148810415_148811624_148811721_148813958_148814138_148814913_148815040_148815505_148815547_148816683_148816779_148817221_148817392_148817876_148818118_148819595_148819688_148826468_148826633_148827163_148827267_148828739_148828881_148829727_148829849_148832633_148832751_148884163
transcript_185347.known	chr7	-	2921	10	FSM	ENSG00000155660.11	ENST00000286091.9	2921	10	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_3	1143.39631615747	699	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTTAAGAACTGCGTTAGAA	-149028648	False	NA	-23	True	AATAAA	-14	NA	149028662	149003067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_149004210_149005140_149005375_149005896_149006057_149008158_149008311_149011845_149012005_149012154_149012361_149014903_149015043_149018991_149019198_149020966_149021148_149028320
transcript_185389.known	chr7	-	3209	4	FSM	ENSG00000197362.15	ENST00000491431.2	3209	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	12.9700509722291	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAT	-149088519	True	NA	NA	False	NA	NA	NA	149090718	149069640	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_149072474_149074385_149074539_149080590_149080718_149090622
transcript_185391.nnic	chr7	-	2870	4	NNC	ENSG00000197362.15	novel	3209	4	NA	NA	-20	-327	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	12.9700509722291	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGAAGTTCTGACATTTT	-149088603	True	NA	-15	True	TATAAA	-19	NA	149090802	149069969	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_149072380_149074385_149074539_149080590_149080718_149090622
transcript_185392.known	chr7	-	3144	3	FSM	ENSG00000197362.15	ENST00000316286.13	3144	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	11.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	-149088583	True	NA	NA	False	NA	NA	NA	149090782	149069642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_149072474_149074385_149074539_149090622
transcript_185395.known	chr7	-	3198	4	FSM	ENSG00000204947.9	ENST00000378061.7	3198	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	5.8878405775519	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTACCCATGTGTTCTTT	-149126304	False	NA	-6	True	AATAAA	-28	NA	149126324	149102783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_149105567_149112136_149112296_149118221_149118349_149126195
transcript_185399.known	chr7	+	5460	6	FSM	ENSG00000197024.9	ENST00000475153.6	5460	6	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_1	22.6503863101714	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACCTCATTCCAAATGGAA	149140025	True	NA	NA	False	ATTAAA	-16	NA	149147452	149183042	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_149147767_149153944_149154341_149166157_149166285_149166816_149166931_149176467_149176582_149178647
transcript_18540.nic	chr1	+	4581	19	NIC	ENSG00000058673.17	novel	5015	20	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	121.966854432862	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGTTGTGAGCTAAGTA	203787269	True	NA	8	True	AATAAA	-18	NA	203795630	203854124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_203795795_203801574_203801629_203802956_203803017_203816925_203817125_203818569_203818690_203828298_203828423_203829450_203829655_203829779_203829897_203830122_203830204_203831660_203831772_203833790_203833854_203837965_203838065_203840305_203840375_203847183_203847688_203848330_203848408_203849710_203850027_203850514_203850682_203851056_203851125_203852140
transcript_185407.known	chr7	+	1815	9	FSM	ENSG00000170265.12	ENST00000479907.1	1815	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	7.14142842854285	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGGGCCGGACGGAGTGG	149192152	True	NA	NA	False	NA	NA	NA	149195549	149224663	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_149195755_149198332_149198753_149206695_149206823_149207350_149207471_149210584_149210705_149212357_149212472_149213700_149213815_149223811_149223991_149224247
transcript_185408.known	chr7	+	3651	8	FSM	ENSG00000170265.12	ENST00000610704.5	3651	8	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_2	3.71977616179758	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAATTCAATGGGGTATTT	149192148	True	NA	13	True	AGTAAA	-18	NA	149195545	149226238	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_149195755_149198332_149198753_149206695_149206823_149207350_149207471_149210584_149210705_149212357_149212472_149213700_149213815_149223811
transcript_185415.known	chr7	+	2807	5	FSM	ENSG00000170260.9	ENST00000335870.7	2807	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	15.1554445662277	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATACTGGATGTTTTTC	149238254	True	NA	6	True	AATAAA	-30	NA	149239650	149255606	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_149239803_149250158_149250549_149250680_149250808_149252705_149252796_149253558
transcript_185453.known	chr7	+	4424	6	FSM	ENSG00000204946.10	ENST00000434415.6	4424	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	5.05964425626941	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTGCGTGCGCTTGATCT	149261533	True	NA	NA	False	AATAAA	-15	NA	149262195	149284988	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_149262358_149266334_149266731_149266818_149266946_149267096_149267223_149278398_149278528_149281504
transcript_185465.known	chr7	-	3172	6	FSM	ENSG00000196453.8	ENST00000247930.5	3172	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	23.9031378693259	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCGTTTCCTGTTTGCCGT	-149461052	False	NA	-1	True	AATAGA	-17	NA	149461062	149431362	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_149432933_149436574_149436827_149450998_149451113_149454110_149454238_149455176_149456038_149460814
transcript_185467.known	chr7	-	3799	7	FSM	ENSG00000181220.18	ENST00000340622.8	3799	7	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	31.4081553457414	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTTGTTGGGTTCCATT	-149496276	True	NA	-2	True	AATAAA	-18	NA	149497809	149472792	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_149475481_149476921_149477048_149477563_149477756_149492858_149492973_149493988_149494071_149494203_149494504_149497512
transcript_185468.known	chr7	-	3949	7	FSM	ENSG00000181220.18	ENST00000644635.1	3949	7	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	28.7831933986176	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCCTAGGCTTGGTCACC	-149496284	True	NA	95	True	GGGGCT	-25	NA	149497817	149472695	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_149475481_149476921_149477048_149477563_149477756_149492858_149492973_149493988_149494116_149494203_149494504_149497512
transcript_185469.known	chr7	-	3797	7	FSM	ENSG00000181220.18	ENST00000685153.1	2425	7	-64	-1308	2	-2	multi-exon	FALSE	canonical	3	57	junction_1	36.8906040431255	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCAGTTTGTTGGGTTCC	-149496274	True	NA	-5	True	AATAAA	-15	NA	149497807	149472795	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_149475484_149476921_149477048_149477563_149477756_149492858_149492973_149493988_149494071_149494203_149494504_149497512
transcript_18547.known	chr1	+	5917	18	FSM	ENSG00000058673.17	ENST00000367210.3	5917	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	115.412933975009	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGTTGTGAGCTAAGTA	203787261	True	NA	8	True	AATAAA	-18	NA	203795622	203854124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_203795795_203801574_203803017_203816925_203817125_203818569_203818690_203828298_203828423_203829450_203829655_203829779_203829897_203830122_203830204_203831660_203831772_203833790_203833854_203837965_203838065_203840305_203840375_203847183_203847688_203848330_203848408_203849710_203850027_203850514_203850682_203851056_203851125_203852140
transcript_185470.nic	chr7	-	3868	7	FSM	ENSG00000181220.18	ENST00000458143.7	3846	7	-24	2	-16	-2	multi-exon	FALSE	canonical	3	57	junction_1	34.9702254305955	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCAGTTTGTTGGGTTCC	NA	False	NA	-5	True	AATAAA	-15	NA	149497833	149472795	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_149475484_149476921_149477048_149477563_149477756_149492858_149492973_149493988_149494116_149494203_149494504_149497512
transcript_185485.nic	chr7	-	3770	9	NIC	ENSG00000133624.14	novel	3564	9	NA	NA	-17	0	intron_retention	FALSE	canonical	3	15	junction_3	3.73329613076702	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGAGTGTTCTGCATCA	-149623856	True	NA	0	True	AATAAA	-20	NA	149624769	149547153	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_149549375_149550867_149550947_149551573_149551827_149552800_149553017_149558607_149558840_149619923_149620038_149621045_149621173_149621259_149621560_149624541
transcript_185487.known	chr7	-	1616	9	FSM	ENSG00000133624.14	ENST00000486492.5	1616	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	6.61437827766148	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACTGCCTCTTTCAGTC	-149623715	False	NA	NA	False	NA	NA	NA	149624628	149549082	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_149549375_149550867_149550947_149551654_149551827_149552800_149553014_149558607_149558840_149619923_149620038_149621045_149621173_149621259_149621560_149624541
transcript_185493.known	chr7	-	565	4	FSM	ENSG00000133624.14	ENST00000513792.2	1214	4	129	520	63	-175	multi-exon	FALSE	canonical	3	22	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGGCTGGGAGAAGGCC	-149623652	False	NA	NA	False	NA	NA	NA	149624565	149619923	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_149620038_149621045_149621173_149621259_149621560_149624541
transcript_185504.known	chr7	+	3763	17	FSM	ENSG00000133619.18	ENST00000496259.6	3827	17	60	4	-46	0	multi-exon	FALSE	canonical	3	14	junction_1	10.3333123319679	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGCCCTGACTCCTATA	149713707	True	NA	13	True	ATTAAA	-16	NA	149715010	149734571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_149715067_149719545_149719673_149720007_149720128_149720834_149720991_149721382_149721536_149722421_149722554_149722782_149722957_149723733_149723890_149724651_149724850_149725314_149725489_149725886_149726061_149728522_149728676_149729187_149729371_149730146_149730342_149730427_149730569_149731671_149731777_149733205
transcript_185507.nic	chr7	+	3750	17	NIC	ENSG00000133619.18	novel	3827	17	NA	NA	28	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	11.8822346383161	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGCCCTGACTCCTATA	149713675	True	NA	13	True	ATTAAA	-16	NA	149714978	149734571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_149715067_149719545_149719673_149720052_149720128_149720834_149720991_149721382_149721536_149722421_149722554_149722782_149722957_149723733_149723890_149724651_149724850_149725314_149725489_149725886_149726061_149728522_149728676_149729187_149729371_149730146_149730342_149730427_149730569_149731671_149731777_149733205
transcript_185508.known	chr7	+	4020	17	FSM	ENSG00000133619.18	ENST00000319551.12	4020	17	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	12.3989666908174	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCCTGACTCCTATAGAAG	149713753	True	NA	17	True	ATTAAA	-20	NA	149715056	149734575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_149715350_149719532_149719673_149720007_149720128_149720834_149720991_149721379_149721536_149722421_149722554_149722782_149722957_149723733_149723890_149724651_149724850_149725314_149725489_149725886_149726061_149728522_149728676_149729187_149729371_149730146_149730342_149730427_149730569_149731671_149731777_149733205
transcript_185509.nic	chr7	+	4066	17	NIC	ENSG00000133619.18	novel	4020	17	NA	NA	53	0	intron_retention	TRUE	canonical	2	2	junction_1	12.4898396206677	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGCCCTGACTCCTATA	149713700	True	NA	13	True	ATTAAA	-16	NA	149715003	149734571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_149715350_149719532_149719673_149720007_149720128_149720834_149720991_149721382_149721536_149722421_149722554_149722782_149722957_149723733_149723890_149724651_149724850_149725314_149725489_149725886_149726061_149728522_149728676_149729187_149729371_149730146_149730342_149730427_149730569_149731671_149731777_149733205
transcript_185518.nic	chr7	+	3612	16	NIC	ENSG00000133619.18	novel	3827	17	NA	NA	28	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_12	14.1443353404189	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGCCCTGACTCCTATA	149713675	True	NA	13	True	ATTAAA	-16	NA	149714978	149734571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_149715067_149719545_149719673_149720007_149720128_149720834_149720991_149721382_149721536_149722421_149722554_149722782_149722957_149723733_149723890_149724651_149724850_149725314_149725489_149725886_149726061_149728522_149728676_149730146_149730342_149730427_149730569_149731671_149731777_149733205
transcript_185525.known	chr7	-	913	5	FSM	ENSG00000181444.13	ENST00000484747.5	913	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	1.78535710713571	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACCATCCTGGCTCCTGC	NA	False	NA	NA	False	AATAAA	-24	NA	149773219	149764181	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_149764679_149769089_149769201_149770439_149770557_149770998_149771075_149773107
transcript_185526.known	chr7	+	594	4	FSM	ENSG00000106479.11	ENST00000460379.1	594	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5.8878405775519	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGAAGGTTATACAGGACC	149838107	True	NA	NA	False	NA	NA	NA	149838374	149848024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_149838462_149844624_149844737_149846150_149846256_149847734
transcript_185527.nic	chr7	+	1951	4	ISM	ENSG00000106479.11	ENST00000223210.5	6942	8	33	18239	33	1216	5prime_fragment	FALSE	canonical	2	8	junction_1	2.86744175568088	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACACAGACTTTGGAGGAA	149838140	True	NA	NA	False	ATTAAA	-16	NA	149838407	149849240	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_149838636_149844624_149844737_149846150_149846256_149847734
transcript_185530.known	chr7	+	1666	4	FSM	ENSG00000171130.19	ENST00000479613.5	1666	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	78.4063489492755	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATTACTGTTTGGTGA	149870941	True	NA	26	True	AATAAA	-12	NA	149873975	149880689	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_149874170_149875597_149875646_149878677_149878747_149879334
transcript_185531.known	chr7	+	1723	4	FSM	ENSG00000171130.19	ENST00000425642.3	1723	4	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	5.43650214343336	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGTTTGGTGACAAAGC	149870934	True	NA	32	True	AATAAA	-18	NA	149873968	149880695	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_149874170_149875597_149875646_149878677_149878791_149879334
transcript_185533.known	chr7	-	2973	4	FSM	ENSG00000204934.10	ENST00000461019.5	2973	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	0.816496580927726	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTGAAAGCACTTTGTAAA	-149873745	True	NA	-5	True	AGTAAA	-17	NA	149873845	149867772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_149869859_149870241_149870352_149871641_149871797_149873223
transcript_185540.known	chr7	+	513	3	FSM	ENSG00000171130.19	ENST00000464662.5	513	3	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	6	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTGGTATGGCACTTCTG	149870958	True	NA	NA	False	NA	NA	NA	149873992	149878965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_149874170_149875597_149875646_149878677
transcript_185541.known	chr7	+	893	3	FSM	ENSG00000171130.19	ENST00000606024.5	893	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	80	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGGATGTCTTCCCTC	149870952	True	NA	NA	False	NA	NA	NA	149873986	149879996	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_149874170_149875597_149875646_149879334
transcript_185542.known	chr7	+	1766	5	FSM	ENSG00000171130.19	ENST00000471877.5	1766	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	84.1100469622981	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTTTGGTGACAAAGCC	149870952	True	NA	33	True	AATAAA	-19	NA	149873986	149880696	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_149874170_149875597_149875646_149878677_149878791_149879165_149879226_149879334
transcript_185543.known	chr7	-	1157	8	FSM	ENSG00000106526.11	ENST00000683684.1	1157	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	33.6409614267233	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGTTTGTTTTTCTCA	-150323455	True	NA	NA	False	AATAAA	-16	NA	150323545	150247211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_150247570_150248947_150249055_150284752_150284846_150286366_150286541_150289449_150289594_150293311_150293420_150295251_150295348_150323468
transcript_185545.known	chr7	-	685	6	FSM	ENSG00000106538.10	ENST00000223271.8	685	6	0	0	0	0	multi-exon	FALSE	canonical	3	1941	junction_5	117.264828486635	799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTCTCAGCTCCTTGT	-150315856	True	NA	-15	True	AATAAA	-13	NA	150341629	150338328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_150338440_150338614_150338742_150338985_150339082_150340099_150340205_150340435_150340630_150341577
transcript_185549.known	chr7	-	583	5	FSM	ENSG00000106538.10	ENST00000467793.5	583	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	895.027792864557	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCCAGCTGCCTCTCAG	-150315889	True	NA	-23	True	AATAAA	-5	NA	150341662	150338336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_150338440_150338985_150339082_150340099_150340205_150340435_150340630_150341577
transcript_185550.known	chr7	+	667	3	FSM	ENSG00000188707.6	ENST00000463441.5	667	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	136.5	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGGATGGGTACAGGGGC	NA	False	NA	NA	False	NA	NA	NA	150323215	150328786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_150323561_150325840_150326011_150328634
transcript_185552.known	chr7	+	1815	3	FSM	ENSG00000127399.15	ENST00000359623.9	1815	3	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_2	13.5	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGCCTGGCATTTCATG	150320821	True	NA	21	True	ATTAAA	-21	NA	150323354	150338156	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_150323561_150325840_150326011_150336717
transcript_185555.known	chr7	+	1684	2	FSM	ENSG00000127399.15	ENST00000323078.7	1684	2	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCCGTTCTTGTCCA	150320729	True	NA	-32	True	NA	NA	NA	150323262	150338103	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_150323561_150336717
transcript_185556.known	chr7	-	1907	4	FSM	ENSG00000106538.10	ENST00000478771.2	1907	4	0	0	0	0	multi-exon	FALSE	canonical	3	1956	junction_1	43.7442059655397	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTGTGTTGCACGACTT	-150315887	True	NA	-3	True	AATAAA	-25	NA	150341660	150338316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_150338440_150338614_150338742_150338985_150339082_150340099
transcript_185557.known	chr7	-	1618	5	FSM	ENSG00000106538.10	ENST00000466675.5	1618	5	0	0	0	0	multi-exon	FALSE	canonical	3	1956	junction_1	115.371952830833	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGCCATGATAATAAAGCT	-150315870	True	NA	-44	True	NA	NA	NA	150341643	150338357	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_150338440_150338614_150338742_150338985_150339082_150340099_150340205_150340435
transcript_185559.known	chr7	+	1029	4	FSM	ENSG00000214022.12	ENST00000482680.1	1029	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	63.5102791330313	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGGACCAGCTAGTTGCC	150362061	True	NA	NA	False	NA	NA	NA	150368811	150371803	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_150368942_150369670_150369869_150370759_150370885_150371227
transcript_185561.known	chr7	+	899	4	FSM	ENSG00000214022.12	ENST00000467980.5	899	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	16.1314048434171	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTCTGCATCTGCGGGCC	150362089	True	NA	NA	False	NA	NA	NA	150368839	150371632	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_150369014_150369670_150369869_150370759_150370885_150371230
transcript_185576.known	chr7	+	3130	3	FSM	ENSG00000214022.12	ENST00000489432.7	3130	3	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_2	28	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGGCTGGGGAGTGTTA	150362071	True	NA	21	True	AATAAA	-16	NA	150368821	150374039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_150368942_150369670_150369869_150371227
transcript_185580.nnic	chr7	+	3269	3	NIC	ENSG00000214022.12	novel	3292	4	NA	NA	-180	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	11	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGGCTGGGGAGTGTTA	150368598	False	NA	21	True	AATAAA	-16	NA	150368609	150374039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_150368942_150370759_150370885_150371227
transcript_185581.nic	chr7	+	3373	3	NIC	ENSG00000214022.12	novel	3130	3	NA	NA	-119	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	40	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGGCTGGGGAGTGTTA	150368447	False	NA	21	True	AATAAA	-16	NA	150368670	150374039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_150369034_150369670_150369869_150371227
transcript_185583.known	chr7	+	480	3	FSM	ENSG00000214022.12	ENST00000522266.1	480	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	29	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCCAGGCAGGGCCCAT	150368885	True	NA	NA	False	NA	NA	NA	150368896	150371392	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_150369014_150369670_150369869_150371227
transcript_185585.known	chr7	+	1262	3	FSM	ENSG00000214022.12	ENST00000488943.1	1262	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	55	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCCCCCAGGAGTCCGCGG	150362071	True	NA	NA	False	NA	NA	NA	150368821	150372242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_150368942_150369741_150369869_150371227
transcript_185587.known	chr7	+	2261	3	FSM	ENSG00000196456.13	ENST00000329630.10	2261	3	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	7.5	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAATGGTTTGATGTCCCT	150377388	True	NA	7	True	AATAAA	-15	NA	150379329	150398630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_150379393_150388421_150388502_150396512
transcript_185588.known	chr7	+	582	3	FSM	ENSG00000284048.2	ENST00000483664.5	582	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	42	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCTTCCAGATGTGAATG	150377387	True	NA	NA	False	NA	NA	NA	150379328	150410597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_150379393_150388421_150388502_150410159
transcript_185590.known	chr7	+	1167	3	FSM	ENSG00000284691.1	ENST00000498682.3	1167	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	22.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGCACCCGGGCATGAG	150405112	False	NA	NA	False	NA	NA	NA	150405145	150410249	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_150405318_150407583_150408489_150410159
transcript_185597.nic	chr7	+	1966	3	NIC	ENSG00000284691.1	novel	859	2	NA	NA	-100	353	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	12.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAGCCCTTTTTAGTCAT	150405329	True	NA	3	True	AATAAA	-8	NA	150405636	150410952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_150405905_150407583_150408489_150410159
transcript_185598.nic	chr7	+	3484	3	NIC	ENSG00000284691.1	novel	859	2	NA	NA	-100	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	12.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTGTAAGGAGTGGTCA	150405329	True	NA	6	True	AATAAA	-17	NA	150405636	150412470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_150405905_150407583_150408489_150410159
transcript_185600.known	chr7	+	1064	2	FSM	ENSG00000214022.12	ENST00000473391.1	1064	2	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATCTTTGCAAACCCAGG	150362059	True	NA	NA	False	AATGAA	-24	NA	150368809	150370602	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_150368942_150369670
transcript_185601.known	chr7	+	1022	2	FSM	ENSG00000214022.12	ENST00000466559.1	1022	2	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	0	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGGCGAGAAGCCCTACCC	150362041	True	NA	NA	False	NA	NA	NA	150368791	150372099	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_150368942_150371227
transcript_185602.known	chr7	+	672	2	FSM	ENSG00000214022.12	ENST00000495535.1	672	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGTGCAGGAATCTGGG	150362075	True	NA	NA	False	NA	NA	NA	150368825	150370134	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_150369034_150369670
transcript_185603.known	chr7	+	910	2	FSM	ENSG00000214022.12	ENST00000469309.1	910	2	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGCACAGTCTGGGCAGG	150362094	True	NA	NA	False	NA	NA	NA	150368844	150370411	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_150369014_150369670
transcript_185604.known	chr7	+	621	2	FSM	ENSG00000214022.12	ENST00000518462.1	621	2	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGCTGCTGCCACCCCA	150369368	False	NA	NA	False	NA	NA	NA	150369379	150371557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_150369671_150371227
transcript_185605.known	chr7	+	2582	2	FSM	ENSG00000284691.1	ENST00000641330.1	2582	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTGTAAGGAGTGGTCA	150400679	False	NA	6	True	AATAAA	-17	NA	150400701	150412470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_150400973_150410159
transcript_185606.known	chr7	-	1115	7	FSM	ENSG00000106565.18	ENST00000326442.10	1115	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	1.10554159678513	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGCCCAGAAAGATATG	NA	False	NA	-11	True	AATAAA	-16	NA	150800364	150791300	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_150791624_150792055_150792176_150793087_150793316_150793543_150793601_150793960_150794072_150796365_150796575_150800297
transcript_185610.known	chr7	-	2441	5	FSM	ENSG00000055118.17	ENST00000461280.2	2441	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	15.6424902109607	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAATGCTGG	-150955747	True	NA	NA	False	AGTAAA	-9	NA	150955821	150949422	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_150950421_150950920_150951121_150951447_150951836_150952424_150952854_150955395
transcript_185613.nic	chr7	+	1941	10	ISM	ENSG00000164867.11	ENST00000297494.8	4366	27	17891	0	-29	0	3prime_fragment	TRUE	canonical	3	15	junction_3	6.74033372804582	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGATTACAGTTTTTTTT	151008750	True	NA	86	True	ACTAAA	-18	NA	151008907	151014588	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_151009063_151009188_151009268_151009397_151009586_151010114_151010288_151010596_151010808_151010898_151010987_151012350_151012473_151013230_151013380_151013723_151013919_151014007
transcript_185617.known	chr7	+	1143	7	FSM	ENSG00000164867.11	ENST00000475017.1	1143	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	7.97913946905722	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGAACTGAAAGTGTCTT	151008779	True	NA	8	True	AATAAA	-18	NA	151008936	151012065	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_151009063_151009188_151009268_151009397_151009586_151010114_151010288_151010596_151010808_151010898_151010987_151011787
transcript_185619.known	chr7	+	1111	6	FSM	ENSG00000164867.11	ENST00000477227.1	1111	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	6.41872261435249	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAAGGATTCAGCATTAT	151010423	True	NA	NA	False	NA	NA	NA	151010532	151014289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_151010808_151010898_151010987_151012350_151012473_151013230_151013380_151013723_151013919_151014007
transcript_185622.known	chr7	+	4656	16	FSM	ENSG00000197150.13	ENST00000358849.9	4656	16	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	10.0111049451208	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGGTATGCAGCCCTTT	151027181	True	NA	13	True	AATAAA	-20	NA	151028449	151047782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_151028611_151033604_151033918_151034272_151034429_151034504_151034600_151034723_151034830_151035580_151035743_151035881_151035968_151036072_151036171_151036543_151036650_151040267_151040302_151040497_151040635_151040827_151040923_151041098_151041233_151041960_151042109_151043970_151044222_151045208
transcript_185623.known	chr7	+	1596	10	FSM	ENSG00000197150.13	ENST00000477092.5	1596	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_9	22.7341044726384	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGCTGTAACAGATCATC	151027198	True	NA	18	True	CATAAA	-29	NA	151028466	151037570	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_151028611_151033604_151033918_151034272_151034429_151034504_151034600_151034723_151034830_151035580_151035743_151035881_151035968_151036072_151036171_151036543_151036650_151037240
transcript_185633.known	chr7	+	4119	23	FSM	ENSG00000164889.15	ENST00000413384.7	4119	23	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_2	49.1571312600624	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATCTGTGGCCTTTTGTC	151054577	True	NA	2	True	AGTAAA	-16	NA	151059588	151076523	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_151059763_151061924_151062039_151064201_151064368_151064525_151064768_151064847_151064967_151066516_151066762_151066850_151066994_151067873_151068055_151069946_151070083_151070180_151070347_151070456_151070572_151070726_151070912_151071071_151071298_151071389_151071606_151071688_151071838_151071941_151072137_151074038_151074294_151074398_151074489_151074674_151074842_151075254_151075509_151075605_151075776_151076012_151076187_151076286
transcript_185641.nnic	chr7	+	3932	22	NIC	ENSG00000164889.15	novel	4119	23	NA	NA	-29	0	combination_of_known_splicesites	FALSE	canonical	3	37	junction_13	87.6217390890967	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATCTGTGGCCTTTTGTC	151059494	False	NA	2	True	AGTAAA	-16	NA	151059559	151076523	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_151059763_151061924_151062039_151064201_151064368_151064525_151064768_151064847_151064967_151066516_151066762_151066850_151066994_151067873_151068055_151069946_151070083_151070180_151070347_151070456_151070572_151070726_151070912_151071071_151071298_151071688_151071838_151071941_151072137_151074038_151074294_151074398_151074489_151074674_151074842_151075254_151075509_151075605_151075776_151076012_151076187_151076286
transcript_185649.known	chr7	+	3947	22	FSM	ENSG00000164889.15	ENST00000392826.6	3947	22	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	90.2805905719142	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTATCTGTGGCCTTTTGT	151062536	False	NA	1	True	AGTAAA	-15	NA	151062546	151076522	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_151062664_151064201_151064368_151064525_151064768_151064847_151064967_151066516_151066762_151066850_151066994_151067873_151068055_151069946_151070083_151070180_151070347_151070456_151070572_151070726_151070912_151071071_151071298_151071389_151071606_151071688_151071838_151071941_151072137_151074038_151074294_151074398_151074489_151074674_151074842_151075254_151075509_151075605_151075776_151076012_151076187_151076286
transcript_185651.known	chr7	+	4387	22	FSM	ENSG00000164889.15	ENST00000461735.1	4387	22	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	87.3894507350472	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATCTGTGGCCTTTTGTC	151061197	True	NA	2	True	AGTAAA	-16	NA	151062633	151076523	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_151063190_151064201_151064368_151064525_151064768_151064847_151064967_151066516_151066762_151066850_151066994_151067873_151068055_151069946_151070083_151070180_151070347_151070456_151070572_151070726_151070912_151071071_151071298_151071389_151071606_151071688_151071838_151071941_151072137_151074038_151074294_151074398_151074489_151074674_151074842_151075254_151075509_151075605_151075776_151076012_151076187_151076286
transcript_185689.known	chr7	-	1122	12	FSM	ENSG00000164885.13	ENST00000485972.6	1122	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	52.1518761102435	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTTGATGTGGTGGTC	-151055184	True	NA	-8	True	CATAAA	-18	NA	151057897	151053814	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151054096_151054211_151054293_151054404_151054466_151055026_151055097_151055276_151055374_151055531_151055607_151055752_151055849_151056579_151056637_151056735_151056797_151056907_151056976_151057071_151057161_151057811
transcript_185693.known	chr7	-	783	11	FSM	ENSG00000164885.13	ENST00000297518.4	783	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	68.9116100522982	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCGGGACCCCCGGCCTC	-151055135	True	NA	NA	False	NA	NA	NA	151057848	151054008	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151054096_151054211_151054293_151054404_151054466_151055026_151055097_151055276_151055374_151055531_151055607_151056579_151056637_151056735_151056797_151056907_151056976_151057071_151057161_151057811
transcript_1857.nnic	chr1	-	2647	14	NNC	ENSG00000131697.18	novel	5548	33	NA	NA	8452	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	14.4639932450107	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCCCTTGGCAGTTTTCT	NA	False	NA	-5	True	ACTAAA	-11	NA	5896872	5862812	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_5863406_5863889_5864034_5864337_5864518_5865101_5865274_5866372_5866459_5867029_5867116_5867739_5867897_5873251_5873336_5874470_5874658_5874873_5875101_5877092_5877299_5880113_5880240_5887285_5887467_5896654
transcript_185704.known	chr7	+	4925	23	FSM	ENSG00000164889.15	ENST00000485713.5	4925	23	0	0	0	0	multi-exon	FALSE	canonical	1	14	junction_1	89.6926455243518	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGTGGCCTTTTGTCTTT	NA	False	NA	5	True	AGTAAA	-19	NA	151058211	151076526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_151059189_151061924_151062039_151064201_151064368_151064525_151064768_151064847_151064967_151066516_151066762_151066850_151066994_151067873_151068055_151069946_151070083_151070180_151070347_151070456_151070572_151070726_151070912_151071071_151071298_151071389_151071606_151071688_151071838_151071941_151072137_151074038_151074294_151074398_151074489_151074674_151074842_151075254_151075509_151075605_151075776_151076012_151076187_151076286
transcript_185713.nnic	chr7	-	2315	10	NIC	ENSG00000164896.21	novel	1794	10	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	2	15	junction_9	136.407070523814	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTTGTGAATCTCAGTTT	-151071406	False	9450	26	True	ATTAAA	-14	NA	151080856	151076625	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_151076833_151076912_151077028_151077100_151077237_151077309_151077402_151077620_151077781_151077878_151078093_151078561_151078702_151078841_151079022_151079499_151079923_151080208
transcript_185714.nic	chr7	-	2080	10	NIC	ENSG00000164896.21	novel	1794	10	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_9	133.46558256118	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTTGTGAATCTCAGTTT	-151071399	False	9450	26	True	ATTAAA	-14	NA	151080849	151076625	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_151076833_151076912_151077028_151077100_151077237_151077309_151077402_151077620_151077781_151077878_151078093_151078561_151078702_151078841_151079022_151079499_151079923_151080436
transcript_185715.known	chr7	-	1794	10	FSM	ENSG00000164896.21	ENST00000297532.11	1794	10	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_9	56.5921078125446	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGTGAATCTCAGTTTTG	-151071359	False	9450	28	True	ATTAAA	-16	NA	151080809	151076623	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151076833_151076912_151077028_151077100_151077237_151077309_151077402_151077620_151077781_151077878_151078093_151078561_151078702_151078841_151079022_151079499_151079923_151080684
transcript_185718.known	chr7	-	1764	10	FSM	ENSG00000164896.21	ENST00000482571.2	1764	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_7	130.256157883866	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTTGTGAATCTCAGTTT	-151071412	False	9450	26	True	ATTAAA	-14	NA	151080862	151076625	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151076833_151076912_151077028_151077100_151077237_151077309_151077402_151077620_151077781_151077878_151078093_151078561_151078702_151078922_151079022_151079499_151079923_151080684
transcript_185724.nic	chr7	-	2626	9	ISM	ENSG00000164896.21	ENST00000297532.11	1794	10	-72	2	-15	0	intron_retention	FALSE	canonical	3	353	junction_8	50.3846144671168	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTTGTGAATCTCAGTTT	-151071431	False	NA	26	True	ATTAAA	-14	NA	151080881	151076625	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_151076833_151076912_151077028_151077100_151077237_151077309_151077402_151077620_151077781_151077878_151078093_151078561_151078702_151078841_151079022_151079499
transcript_185728.known	chr7	-	1402	9	FSM	ENSG00000164896.21	ENST00000353841.6	1402	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_8	138.739357699969	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTTGTGAATCTCAGTTT	-151071392	False	9450	26	True	ATTAAA	-14	NA	151080842	151076625	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151076833_151076912_151077028_151077100_151077237_151077309_151077402_151077620_151077781_151077878_151078093_151078561_151078702_151078841_151079022_151080684
transcript_18573.known	chr1	+	1560	5	FSM	ENSG00000182004.13	ENST00000414487.7	1560	5	0	0	0	0	multi-exon	FALSE	canonical	3	3867	junction_1	431.785247547899	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGAGTTTGAAATTAAT	203838067	True	NA	4	True	AATAAA	-22	NA	203861598	203871152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_203861714_203862195_203862223_203863662_203863726_203865040_203865120_203869876
transcript_18574.known	chr1	+	532	5	FSM	ENSG00000182004.13	ENST00000475035.5	532	5	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	1954.97858044532	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACATTGCTTCTTACTAT	203838071	True	NA	26	True	AATAAA	-28	NA	203861602	203870084	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_203861744_203862181_203862223_203863662_203863726_203865040_203865120_203869876
transcript_185741.known	chr7	-	1826	9	FSM	ENSG00000164896.21	ENST00000482806.5	1826	9	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_8	59.8560773856757	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTAAAGTTCCTTTCCTTC	-151071340	False	9450	6	True	NA	NA	NA	151080790	151076645	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151076833_151076912_151077028_151077100_151077402_151077620_151077781_151077878_151078093_151078561_151078702_151078841_151079022_151079499_151079923_151080684
transcript_185753.known	chr7	-	1521	8	FSM	ENSG00000164896.21	ENST00000460980.5	1521	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_7	147.091253086966	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCGTTGTGAATCTCAG	-151071416	False	9450	23	True	ATTAAA	-11	NA	151080866	151076628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151076833_151076912_151077028_151077100_151077237_151077309_151077402_151077620_151078093_151078561_151078702_151078841_151079022_151080684
transcript_18579.known	chr1	+	478	4	FSM	ENSG00000182004.13	ENST00000470492.5	478	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	2239.64347361112	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATTTACATTGCTTC	203838077	True	NA	19	True	AATAAA	-21	NA	203861608	203870077	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_203861744_203863662_203863726_203865040_203865120_203869876
transcript_18580.nic	chr1	+	482	4	NIC	ENSG00000182004.13	novel	967	4	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	316	junction_1	2093.37351341481	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACATTGCTTCTTACTAT	203838292	False	NA	26	True	AATAAA	-28	NA	203861823	203870084	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_203861956_203863662_203863726_203865040_203865120_203869876
transcript_18581.known	chr1	+	967	4	FSM	ENSG00000182004.13	ENST00000483099.5	967	4	0	0	0	0	multi-exon	FALSE	canonical	3	4258	junction_1	357.044348319178	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTACATTGCTTCTTAC	203838071	True	NA	23	True	AATAAA	-25	NA	203861602	203870081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_203862223_203863662_203863726_203865040_203865120_203869876
transcript_18582.known	chr1	+	4076	14	FSM	ENSG00000143842.15	ENST00000367204.6	4076	14	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_6	48.9224721781685	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCCCTTGTGCAGGGGA	204064410	True	NA	18	True	AATAAA	-18	NA	204073114	204127743	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_204073712_204112914_204113135_204114320_204114433_204114518_204114606_204116506_204116680_204117121_204117191_204117592_204117708_204121899_204121986_204122236_204122400_204122853_204122964_204123111_204123209_204123660_204123805_204124640_204124858_204125857
transcript_185857.known	chr7	-	826	2	FSM	ENSG00000164896.21	ENST00000478477.1	826	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCGCCTTCCCCGAAGGC	-151070481	False	NA	NA	False	NA	NA	NA	151079931	151077698	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151078093_151079499
transcript_185864.nnic	chr7	-	1194	3	NNC	ENSG00000164897.14	novel	1295	3	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	228	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTGCAGTGTGTCTGAG	-151074078	True	NA	-8	True	ATTAAA	-18	NA	151083528	151081085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_-_151081901_151082174_151082459_151083433
transcript_185865.known	chr7	-	899	3	FSM	ENSG00000164897.14	ENST00000482202.5	899	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	234.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGCCTGCCCAGGCC	-151073950	False	NA	NA	False	NA	NA	NA	151083400	151081483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151081901_151082174_151082594_151083337
transcript_185866.known	chr7	-	1295	3	FSM	ENSG00000164897.14	ENST00000297533.9	1295	3	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_2	92.5	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGCAGTGTGTCTGAGT	-151074043	True	NA	-7	True	ATTAAA	-19	NA	151083493	151081084	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151081901_151082174_151082594_151083433
transcript_185871.nic	chr7	+	3049	18	NIC	ENSG00000133612.19	novel	2730	16	NA	NA	-10	0	combination_of_known_junctions	TRUE	canonical	3	3	junction_1	60.4696154648239	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTTTCCCCCTTTTAC	151085830	False	NA	15	True	AATAAA	-17	NA	151085856	151144434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_151086010_151116792_151116852_151117094_151117183_151117370_151117457_151117635_151117778_151118209_151118345_151118504_151118633_151119986_151120146_151123793_151123887_151128579_151128685_151134399_151134569_151138142_151138314_151139978_151140117_151141897_151142053_151142162_151142254_151142411_151142635_151143340_151143597_151143736
transcript_185873.nic	chr7	+	3094	18	NIC	ENSG00000133612.19	novel	2730	16	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	59.35332011772	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTTTCCCCCTTTTAC	151085836	False	NA	15	True	AATAAA	-17	NA	151085862	151144434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_151086061_151116792_151116852_151117094_151117183_151117370_151117457_151117635_151117778_151118209_151118345_151118504_151118633_151119986_151120146_151123793_151123887_151128579_151128685_151134399_151134569_151138142_151138314_151139978_151140117_151141897_151142053_151142162_151142254_151142411_151142635_151143340_151143597_151143736
transcript_185880.nic	chr7	+	2785	16	NIC	ENSG00000133612.19	novel	2730	16	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	63.7597574232107	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTTTCCCCCTTTTAC	151085836	False	NA	15	True	AATAAA	-17	NA	151085862	151144434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_151086061_151116792_151116852_151117094_151117183_151117370_151117457_151117635_151117778_151118209_151118345_151118504_151118633_151119986_151120146_151123793_151123887_151128579_151128685_151134399_151134569_151141897_151142053_151142162_151142254_151142411_151142635_151143340_151143597_151143736
transcript_185903.known	chr7	-	4527	15	FSM	ENSG00000033050.9	ENST00000287844.7	4527	15	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_14	40.4058492431631	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGCCTTGTTTTGGATT	-151222323	True	NA	-2	True	AATACA	-15	NA	151227205	151211483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151214192_151214878_151215083_151215603_151215733_151215966_151216030_151218080_151218192_151218560_151218651_151218753_151218874_151219063_151219160_151221577_151221681_151222520_151222617_151223677_151223850_151223931_151224115_151224775_151224989_151226304_151226501_151227162
transcript_185917.known	chr7	-	2018	14	FSM	ENSG00000082014.17	ENST00000392811.6	2018	14	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_13	7.61110991136248	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCCGTGTGGTCATTGGA	NA	False	NA	-2	True	ATTAAA	-17	NA	151277452	151238972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151239157_151239395_151239498_151239623_151239747_151240111_151240248_151240424_151240523_151241491_151241654_151241876_151241979_151242136_151242233_151242480_151242604_151242720_151242844_151243658_151243702_151245459_151245672_151275113_151275252_151277076
transcript_185918.known	chr7	-	1907	13	FSM	ENSG00000082014.17	ENST00000262188.13	1907	13	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_12	10.0785112436753	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGCAACAATTCTCTATC	-151248526	False	NA	NA	False	TTTAAA	-4	NA	151248694	151238779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151239157_151239395_151239498_151239623_151239747_151240111_151240248_151240424_151240523_151241491_151241654_151241876_151241979_151242136_151242233_151242480_151242604_151242720_151242844_151243658_151243702_151245459_151245672_151248484
transcript_18592.known	chr1	-	2475	8	FSM	ENSG00000143845.15	ENST00000367202.9	2475	8	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	20.4160800970855	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGTCTTGAGTGACA	-204151264	True	NA	-1	True	ATTAAA	-16	NA	204152044	204131061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_204132257_204134514_204134589_204137103_204137250_204140034_204140119_204141314_204141458_204146641_204146765_204149702_204149963_204151594
transcript_185929.known	chr7	+	2709	5	FSM	ENSG00000033100.17	ENST00000495645.5	2709	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	41.7035669937237	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTTTTTAGGTCTAGG	151230385	True	NA	18	True	ATTAAA	-14	NA	151232488	151238819	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_151232815_151234085_151234275_151235047_151235613_151236407_151236591_151237373
transcript_18593.known	chr1	-	2431	8	FSM	ENSG00000143845.15	ENST00000367201.7	2431	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	58.0193493410533	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGTCTTGAGTGACA	-204151855	False	NA	-1	True	ATTAAA	-16	NA	204151894	204131061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_204132257_204134514_204134695_204137103_204137250_204140034_204140119_204141314_204141458_204146641_204146765_204149702_204149963_204151594
transcript_185931.known	chr7	+	3978	4	FSM	ENSG00000033100.17	ENST00000035307.7	3989	4	16	-5	10	5	multi-exon	FALSE	canonical	3	75	junction_3	18.4028983224563	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGGTCTAGGGAAAATTG	151230395	True	NA	26	True	ATTAAA	-22	NA	151232498	151238827	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_151234275_151235047_151235613_151236407_151236591_151237373
transcript_185933.nnic	chr7	+	3832	3	FSM	ENSG00000033100.17	ENST00000692651.1	2795	3	-896	-141	-26	0	multi-exon	FALSE	canonical	3	13	junction_2	51	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTTTAGGTCTAGGGAA	151230353	True	NA	21	True	ATTAAA	-17	NA	151232456	151238822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_151234275_151235047_151235613_151237373
transcript_185934.nic	chr7	+	5593	2	FSM	ENSG00000033100.17_ENSG00000284191.1	ENST00000690444.1	1852	2	-896	-2845	-26	0	multi-exon	FALSE	canonical	3	115	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTTTAGGTCTAGGGAA	151230353	True	NA	21	True	ATTAAA	-17	NA	151232456	151238822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_151234275_151235047
transcript_185938.known	chr7	+	3107	15	FSM	ENSG00000013374.17	ENST00000413040.7	3107	15	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_12	126.441101074043	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCACCCTAATTTTGCAT	151336348	True	NA	16	True	AATAAA	-23	NA	151341771	151378449	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_151341847_151345347_151345467_151349072_151349241_151351423_151351483_151352811_151352883_151355767_151355951_151356127_151356223_151360140_151360248_151366938_151367126_151367860_151367969_151368734_151368888_151374096_151374202_151375847_151375944_151376633_151376812_151377046
transcript_185940.known	chr7	+	3109	15	FSM	ENSG00000013374.17	ENST00000568733.6	3109	15	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_12	137.027946650548	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCACCCTAATTTTGCAT	151336388	True	NA	16	True	AATAAA	-23	NA	151341811	151378449	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_151341847_151345347_151345467_151349072_151349241_151351423_151351483_151352811_151352883_151355767_151355951_151356127_151356223_151360140_151360248_151366938_151367126_151367860_151367969_151368734_151368888_151374096_151374244_151375847_151375944_151376633_151376812_151377046
transcript_185946.nic	chr7	+	948	9	ISM	ENSG00000013374.17	ENST00000568733.6	3109	15	7	11393	7	-1749	5prime_fragment	FALSE	canonical	3	200	junction_8	74.3369650644953	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACTTGGCCCAGAAATG	151336395	True	NA	NA	False	NA	NA	NA	151341818	151367056	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_151341847_151345347_151345467_151349072_151349241_151351423_151351483_151352811_151352883_151355767_151355951_151356127_151356223_151360140_151360248_151366938
transcript_185947.known	chr7	+	1703	9	FSM	ENSG00000013374.17	ENST00000468404.5	1703	9	0	0	0	0	multi-exon	TRUE	canonical	3	131	junction_8	95.4502488210481	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGACCAAAGAGGTTTCTT	151336380	True	NA	22	True	AATAAA	-28	NA	151341803	151361249	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_151341847_151345347_151345467_151349072_151349241_151351423_151351483_151352811_151352883_151355767_151355951_151356127_151356223_151360140_151360915_151361058
transcript_185948.known	chr7	+	3210	15	FSM	ENSG00000013374.17	ENST00000470229.6	3210	15	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_12	144.256450356259	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAAATATATTCAAAAATT	151336388	True	NA	-2	True	AATAAA	-5	NA	151341811	151378431	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_151341966_151345347_151345467_151349072_151349241_151351423_151351483_151352811_151352883_151355767_151355951_151356127_151356223_151360140_151360248_151366938_151367126_151367860_151367969_151368734_151368888_151374096_151374244_151375847_151375944_151376633_151376812_151377046
transcript_185949.nic	chr7	+	1819	9	NIC	ENSG00000013374.17	novel	1703	9	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_1	136.516253611063	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGACCAAAGAGGTTTCTT	151336383	True	NA	22	True	AATAAA	-28	NA	151341806	151361249	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_151341966_151345347_151345467_151349072_151349241_151351423_151351483_151352811_151352883_151355767_151355951_151356127_151356223_151360140_151360915_151361058
transcript_18595.nic	chr1	-	2526	7	NIC	ENSG00000143845.15	novel	2475	8	NA	NA	-174	0	intron_retention	FALSE	canonical	3	12	junction_5	63.0099198539405	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGTCTTGAGTGACA	NA	False	NA	-1	True	ATTAAA	-16	NA	204152218	204131061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_204132257_204134514_204134589_204137103_204137250_204140034_204140119_204141314_204141458_204149702_204149963_204151594
transcript_185960.known	chr7	-	2038	6	FSM	ENSG00000187260.16	ENST00000334493.11	2038	6	0	0	0	0	multi-exon	FALSE	canonical	2	28	junction_5	15.7733953225043	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTCCTGTGTCCTCTTTT	-151409161	True	NA	-4	True	AATATA	-18	NA	151410038	151381123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151381747_151381877_151381982_151385087_151385224_151395775_151396197_151400099_151400242_151409426
transcript_185961.known	chr7	-	1542	6	FSM	ENSG00000187260.16	ENST00000621812.2	1542	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	24.4997959175174	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGTGTCCTCTTTTTGT	-151410563	True	NA	-1	True	AATATA	-21	NA	151410705	151381120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151381747_151381877_151381982_151385087_151385224_151395775_151396197_151400099_151400242_151410592
transcript_185962.known	chr7	-	1691	6	FSM	ENSG00000187260.16	ENST00000469830.2	1691	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	24.7661058707258	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTGCTCCTGTGTCCTC	-151409489	False	NA	-8	True	AATATA	-14	NA	151409631	151381127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151381747_151381877_151381982_151385087_151385288_151395775_151396197_151400099_151400242_151409426
transcript_185968.known	chr7	-	1905	5	FSM	ENSG00000187260.16	ENST00000628331.1	1905	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	27.0832051279017	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGTGTCCTCTTTTTGT	-151409161	True	NA	-1	True	AATATA	-21	NA	151410038	151381120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151381747_151381877_151381982_151395775_151396197_151400099_151400242_151409426
transcript_185969.known	chr7	-	1428	5	FSM	ENSG00000187260.16	ENST00000477459.5	1428	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	31.7046920817724	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGTGTCCTCTTTTTGT	-151410585	True	NA	-1	True	AATATA	-21	NA	151410727	151381120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151381747_151381877_151381982_151395775_151396197_151400099_151400242_151410592
transcript_185987.known	chr7	-	1057	2	FSM	ENSG00000187260.16	ENST00000484630.1	1057	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAGGATATTAGCCCCAAT	-151409112	True	NA	NA	False	NA	NA	NA	151409989	151408559	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151409054_151409426
transcript_185989.known	chr7	+	704	4	FSM	ENSG00000243836.6	ENST00000480632.5	704	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	7.78888096369861	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCTTTGTGTAAGATGAT	151409186	True	NA	18	True	AATAAA	-33	NA	151409235	151413048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_151409383_151411669_151411793_151411966_151412071_151412718
transcript_18599.known	chr1	-	776	5	FSM	ENSG00000174567.8	ENST00000308302.4	776	5	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_3	8.38152730712011	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGGCTCAGAGTTGGCG	-204213553	True	NA	-3	True	ATTAAA	-20	NA	204213988	204198162	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_204198497_204199194_204199259_204201632_204201812_204202895_204202988_204213881
transcript_185991.known	chr7	-	1989	4	FSM	ENSG00000127377.10	ENST00000337323.3	1989	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGGGCAGCTTGTAATT	-151440079	True	NA	NA	False	AAAACA	-18	NA	151440141	151428831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151430181_151436179_151436326_151437995_151438245_151439896
transcript_185993.known	chr7	-	1153	9	FSM	ENSG00000106615.10	ENST00000478470.5	1153	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_8	994.605378718113	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGAGTTCACTTCCATT	-151519839	False	NA	NA	False	NA	NA	NA	151519851	151466952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151467212_151470570_151470653_151471393_151471442_151471548_151471606_151477332_151477416_151484736_151484805_151490942_151491015_151498088_151498181_151519459
transcript_185995.known	chr7	-	2046	8	FSM	ENSG00000106615.10	ENST00000262187.10	2046	8	0	0	0	0	multi-exon	FALSE	canonical	3	2151	junction_6	110.51105771619	892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGATTGTTAATGAAAAAT	-151519883	False	NA	-3	True	AATAAA	-19	NA	151519895	151466011	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151467212_151470570_151470653_151471393_151471442_151471548_151471606_151477332_151477416_151484736_151484805_151490942_151491015_151519459
transcript_185996.known	chr7	-	744	8	FSM	ENSG00000106615.10	ENST00000496004.5	744	8	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_7	798.113208685053	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACACTGGGAATATATTCT	NA	False	NA	NA	False	NA	NA	NA	151520120	151467100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151467212_151470570_151470653_151471393_151471442_151471548_151471606_151477332_151477416_151484736_151484805_151490942_151491015_151519897
transcript_185999.known	chr7	-	3279	16	FSM	ENSG00000106617.15	ENST00000287878.9	3279	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	67.862475312617	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATTTTGTTAAAGAAGTTA	-151877100	True	NA	-2	True	ATTAAA	-18	NA	151877115	151556126	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151557233_151560523_151560618_151564077_151564225_151565345_151565384_151565719_151565886_151568715_151568843_151570170_151570226_151572663_151572710_151574890_151574950_151576370_151576453_151595344_151595455_151632068_151632139_151675419_151675638_151781151_151781432_151786469_151786542_151876506
transcript_186002.known	chr7	-	1454	13	FSM	ENSG00000106617.15	ENST00000652397.1	1454	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	58.1269563589524	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTGAAGTTTTCATTAT	-151631615	True	NA	NA	False	ATTAAA	-9	NA	151632225	151556945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151557233_151560523_151560618_151564077_151564225_151565345_151565384_151565719_151565886_151566613_151566700_151568715_151568843_151570170_151570226_151572663_151572710_151574890_151574950_151576370_151576453_151595344_151595455_151632068
transcript_186003.known	chr7	-	2318	12	FSM	ENSG00000106617.15	ENST00000418337.6	2318	12	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_5	19.0826822100715	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTTAAAGAAGTTATTT	-151632342	False	65	1	True	ATTAAA	-21	NA	151632353	151556123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151557233_151560523_151560618_151564077_151564225_151565345_151565384_151565719_151565886_151568715_151568843_151570170_151570226_151572663_151572710_151574890_151574950_151576370_151576453_151595344_151595455_151632068
transcript_186006.known	chr7	-	2696	14	FSM	ENSG00000106617.15	ENST00000492843.6	2696	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	58.5431616429103	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAGATTGAAAAATTAAAATA	NA	False	NA	13	True	NA	NA	NA	151736314	151556160	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_151557233_151560523_151560618_151564077_151564225_151565345_151565384_151565719_151565886_151568715_151568843_151570170_151570226_151572663_151572710_151574890_151574950_151576370_151576453_151595344_151595452_151632068_151632139_151675419_151675638_151735899
transcript_186007.known	chr7	+	1064	2	FSM	ENSG00000239911.3	ENST00000467458.3	1076	2	6	6	6	0	multi-exon	FALSE	canonical	3	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGAGCCTTTTTTTAA	151877447	True	NA	12	True	ATTAAA	-23	NA	151877464	151879223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_151877867_151878561
transcript_186010.nnic	chr7	+	2804	13	NNC	ENSG00000178234.13	novel	2739	12	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	94.0837392964374	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGATATTTTGTCTTGT	152021864	True	NA	13	True	AATAAA	-16	NA	152025657	152122340	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_152025885_152027669_152027719_152094189_152094523_152100797_152100922_152103111_152103279_152105244_152105371_152108037_152108288_152110527_152110646_152113245_152113399_152117156_152117376_152118677_152118783_152120830_152120969_152121545
transcript_186011.nnic	chr7	+	2871	13	NIC	ENSG00000178234.13	novel	2739	12	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_1	90.1915785056085	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGATATTTTGTCTTGT	152021870	True	NA	13	True	AATAAA	-16	NA	152025663	152122340	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_152025885_152079286_152079409_152094189_152094523_152100797_152100922_152103111_152103279_152105244_152105371_152108037_152108288_152110527_152110646_152113245_152113399_152117156_152117376_152118677_152118783_152120830_152120969_152121545
transcript_186013.nic	chr7	+	2869	13	NIC	ENSG00000178234.13	novel	2739	12	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	91.6510213921385	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGATATTTTGTCTTGT	152021872	True	NA	13	True	AATAAA	-16	NA	152025665	152122340	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_152025885_152027596_152027719_152094189_152094523_152100797_152100922_152103111_152103279_152105244_152105371_152108037_152108288_152110527_152110646_152113245_152113399_152117156_152117376_152118677_152118783_152120830_152120969_152121545
transcript_186017.known	chr7	+	2739	12	FSM	ENSG00000178234.13	ENST00000430044.7	2739	12	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	27.1067677804664	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGATATTTTGTCTTGT	152021880	True	NA	13	True	AATAAA	-16	NA	152025673	152122340	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_152025885_152094189_152094523_152100797_152100922_152103111_152103279_152105244_152105371_152108037_152108288_152110527_152110646_152113245_152113399_152117156_152117376_152118677_152118783_152120830_152120969_152121545
transcript_186030.known	chr7	-	4526	26	FSM	ENSG00000055609.21	ENST00000684550.1	4526	26	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_13	4.74063286914311	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGTTGTTTTTGTTAAT	-152436130	False	NA	NA	False	AATAAA	-23	NA	152436146	152202859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_152203065_152205105_152205226_152207299_152207429_152220522_152220736_152222000_152222067_152222572_152222683_152224014_152224180_152224434_152224617_152229922_152230028_152230219_152230322_152235816_152235934_152238706_152238827_152247901_152248621_152249875_152249954_152250852_152250967_152251938_152252091_152252545_152252716_152263015_152263131_152265037_152265210_152273704_152273868_152309965_152310076_152311797_152311947_152315137_152315339_152330600_152330740_152358586_152358676_152435625
transcript_186036.known	chr7	-	971	5	FSM	ENSG00000055609.21	ENST00000682301.1	971	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	8.87059749960509	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTTGTTTCTCTAAAT	-152436628	False	NA	NA	False	AATAAA	-17	NA	152436644	152314780	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_152315339_152330600_152330740_152358586_152358676_152435625_152435788_152436621
transcript_186037.known	chr7	+	1764	1	FSM	ENSG00000261455.1	ENST00000564834.1	1764	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACGTATGTTTTTTTATT	152463766	False	NA	NA	False	AATAAA	-23	NA	152463785	152465549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_152463800_152465500
transcript_186038.known	chr7	-	4771	3	FSM	ENSG00000196584.3	ENST00000359321.2	4771	3	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	18.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAATGATGTCTTTTGTTT	-152668883	True	NA	-28	True	TATAAA	-1	NA	152676141	152644775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_152649364_152660700_152660783_152676040
transcript_186063.known	chr7	+	2213	12	FSM	ENSG00000133627.18	ENST00000256001.13	2213	12	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_2	45.6119094205859	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTGTAGTGTGGTGG	152754643	True	NA	20	True	AATAAA	-26	NA	152759751	152855378	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_152759927_152783186_152783243_152800530_152800656_152801620_152801732_152814549_152814646_152816480_152816589_152820298_152820443_152823341_152823516_152825029_152825123_152852125_152852252_152853493_152853578_152854457
transcript_186071.known	chr7	+	1692	11	FSM	ENSG00000133627.18	ENST00000397282.2	1692	11	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	59.3164395425079	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGTAAATAAAATGTTTAAA	152754679	True	NA	-17	True	NA	NA	NA	152759787	152854949	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_152759927_152800530_152800656_152801620_152801732_152814549_152814646_152816480_152816589_152820298_152820443_152823341_152823516_152825029_152825123_152852125_152852252_152853493_152853578_152854457
transcript_186082.known	chr7	+	1566	10	FSM	ENSG00000133627.18	ENST00000377776.7	1566	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_9	92.9776290629786	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCCTATTTTTGTAAATA	152754640	True	NA	-28	True	NA	NA	NA	152759748	152854938	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_152759927_152783186_152783243_152800530_152800656_152801620_152801732_152814549_152814646_152816480_152816589_152820298_152820443_152823341_152823516_152825029_152825123_152854457
transcript_18609.known	chr1	-	7658	33	FSM	ENSG00000133056.14	ENST00000684373.1	7658	33	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_18	6.11861912526021	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAACTATAATTTTATTTA	-204492931	True	NA	NA	False	AATAAA	-19	NA	204494805	204422632	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_204425041_204425612_204425742_204427647_204427755_204428138_204428221_204429920_204430039_204431668_204431794_204432199_204432402_204433315_204433426_204433792_204433950_204434438_204434609_204438934_204439072_204440191_204440322_204441470_204441564_204442525_204442634_204443416_204443598_204444067_204444163_204444330_204444425_204445955_204446145_204447435_204447579_204449184_204449297_204449849_204450018_204454668_204454792_204455855_204456052_204457036_204457071_204457727_204457875_204459877_204459942_204460323_204460404_204460549_204460662_204464011_204464133_204464449_204464605_204465218_204465320_204468869_204469887_204494355
transcript_186095.known	chr7	-	3990	22	FSM	ENSG00000157212.19	ENST00000457196.5	3990	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	53.9305423796251	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGTAATCCTTTATTATT	-155001393	True	NA	-6	True	AATAAA	-20	NA	155003084	154943686	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_154944165_154946364_154946426_154946511_154946588_154946678_154946814_154947902_154948004_154954254_154954424_154955528_154955632_154957223_154957295_154959889_154959934_154960892_154961078_154961526_154961649_154962320_154962459_154963670_154963767_154967815_154967911_154968402_154969127_154975695_154976332_154983218_154983333_154986016_154986180_154991005_154991070_154993725_154993770_154998649_154998785_155002848
transcript_186103.known	chr7	-	3711	21	FSM	ENSG00000157212.19	ENST00000397192.5	3711	21	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	42.0440245457068	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTGAGTAATCCTTTAT	-155001281	True	NA	-10	True	AATAAA	-16	NA	155002972	154943690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_154944163_154946362_154946426_154946511_154946588_154946678_154946814_154947902_154948004_154954254_154954424_154955528_154955632_154957223_154957295_154959889_154959934_154960892_154961078_154961526_154961649_154962320_154962459_154963670_154963767_154967815_154967911_154968402_154969127_154975695_154976332_154983218_154983333_154991005_154991070_154993725_154993770_154998649_154998785_155002848
transcript_18611.known	chr1	-	5259	2	FSM	ENSG00000158615.10	ENST00000367188.5	5259	2	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATATTTTGGTTCAACTT	-204408731	True	NA	-15	True	AATAAA	-26	NA	204411817	204403380	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_204406314_204409491
transcript_186111.known	chr7	-	3864	21	FSM	ENSG00000157212.19	ENST00000404141.6	3864	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	42.0440245457068	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGAGTAATCCTTTATT	-155003077	False	NA	-9	True	AATAAA	-17	NA	155003124	154943689	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_154944165_154946364_154946426_154946511_154946588_154946678_154946814_154947902_154948004_154954254_154954424_154955528_154955632_154957223_154957295_154959889_154959934_154960892_154961078_154961526_154961649_154962320_154962459_154963670_154963767_154967815_154967911_154968402_154969127_154975695_154976332_154983218_154983333_154991005_154991070_154993725_154993770_154998649_154998785_155002848
transcript_186120.nnic	chr7	+	1218	2	Genic_Genomic	ENSG00000273344.1	novel	2256	1	NA	NA	-3	-835	multi-exon	FALSE	canonical	3	78	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTGGTTGTTTTAGT	155001837	True	NA	24	True	AATATA	-22	NA	155003444	155004868	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Genic_Genomic_chr7_+_155004135_155004340
transcript_186121.known	chr7	+	2256	1	FSM	ENSG00000273344.1	ENST00000608317.1	2256	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGACCTGTGTGAGAGAACT	155001840	True	NA	26	True	AATAAA	-38	NA	155003447	155005703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_155003400_155005700
transcript_186127.nic	chr7	+	3003	7	NIC	ENSG00000186480.13	novel	2908	6	NA	NA	23	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_6	186.416797049574	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTGTATTTATGTTTG	155292134	True	NA	15	True	ATTAAA	-12	NA	155297851	155310233	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_155297960_155298258_155298698_155301565_155301691_155302250_155302418_155302746_155302847_155303824_155303896_155308240
transcript_186133.known	chr7	+	2908	6	FSM	ENSG00000186480.13	ENST00000340368.9	2908	6	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_1	39.1867324486235	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTATTTATGTTTGCT	155292160	True	NA	17	True	ATTAAA	-14	NA	155297877	155310235	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_155297960_155298258_155298698_155301565_155301691_155302250_155302418_155302746_155302847_155308240
transcript_186139.nic	chr7	+	1336	6	NIC	ENSG00000186480.13	novel	2908	6	NA	NA	0	-162	combination_of_known_junctions	FALSE	canonical	3	47	junction_1	165.606038537247	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTTGAACTAAGACTCAAT	155292160	True	NA	17	True	ATTAAA	-21	NA	155297877	155308595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_155298028_155298258_155298698_155301565_155301691_155302250_155302418_155302746_155302847_155308240
transcript_18614.known	chr1	+	10050	11	FSM	ENSG00000198625.14	ENST00000367182.8	10050	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	6.43739077577243	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGTTGTCATTATTTT	204513019	True	NA	11	True	ATTAAA	-18	NA	204516405	204558120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_204516510_204525483_204525597_204526359_204526435_204530683_204530818_204532190_204532247_204537429_204537498_204538208_204538309_204542783_204542945_204544534_204544685_204546796_204546878_204549112
transcript_186141.nic	chr7	+	2976	6	NIC	ENSG00000186480.13	novel	2908	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_1	165.606038537247	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTATTTATGTTTGCT	155292160	True	NA	17	True	ATTAAA	-14	NA	155297877	155310235	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_+_155298028_155298258_155298698_155301565_155301691_155302250_155302418_155302746_155302847_155308240
transcript_186146.known	chr7	+	1127	4	FSM	ENSG00000186480.13	ENST00000342407.5	1127	4	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	183.162951130043	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGCAGCAGTGATTATA	155292171	True	NA	NA	False	TTTAAA	-35	NA	155297888	155308757	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_155297960_155298258_155298698_155302746_155302847_155308240
transcript_18615.known	chr1	+	6102	11	FSM	ENSG00000198625.14	ENST00000463049.5	6102	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	9.56869897112455	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTGACTCGCTTTTGAA	204513019	True	NA	3	True	AATACA	-17	NA	204516405	204554201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_204516510_204525483_204525597_204526359_204526435_204530683_204530818_204532190_204532247_204537458_204537498_204538208_204538309_204542783_204542945_204544534_204544685_204546796_204546878_204549112
transcript_186150.known	chr7	+	1404	6	FSM	ENSG00000184863.11	ENST00000287912.7	1404	6	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_5	11.2142766151009	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTGAGTCTGTGGC	155644265	True	NA	NA	False	AATAAA	-24	NA	155644450	155701183	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_155644920_155665174_155665254_155672866_155672916_155678607_155678685_155680589_155680909_155700772
transcript_186155.known	chr7	-	1356	3	FSM	ENSG00000216895.9	ENST00000460022.6	1356	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	5.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCGTCTCAGTAATGAT	-155643897	True	NA	-2	True	AATAAA	-16	NA	155644377	155641915	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_155642971_155643467_155643605_155644213
transcript_186159.known	chr7	-	947	4	FSM	ENSG00000182648.14	ENST00000447933.7	957	4	10	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	0.942809041582063	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTTGTTCTATTATTTG	-156639923	True	NA	2	True	AATAAA	-36	NA	156640567	156472096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_156472712_156605187_156605381_156605657_156605765_156640535
transcript_186160.known	chr7	-	545	2	FSM	ENSG00000182648.14	ENST00000435354.1	545	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGACAATTATTGTGTT	-156639919	True	NA	-8	True	AGTAAA	-20	NA	156640563	156639431	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_156639949_156640535
transcript_186161.known	chr7	-	2292	1	FSM	ENSG00000182648.14	ENST00000333319.6	2292	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGAATTTTTTATTTT	NA	False	NA	2	True	AATAAA	-30	NA	156640654	156638362	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_156638400_156640700
transcript_186175.nic	chr7	-	4897	17	NIC	ENSG00000105983.23	novel	7950	17	NA	NA	-3	636	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	69.6459797834735	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTCATATTTGGTTTAT	-156887874	True	NA	-39	True	ATTAAA	-15	NA	156893219	156680883	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_156684164_156688029_156688192_156724111_156724179_156725434_156725526_156725763_156725838_156727929_156728008_156728643_156728721_156734176_156734258_156756392_156756466_156762133_156762199_156763107_156763177_156763668_156763796_156796388_156796493_156826604_156826745_156833752_156833793_156836808_156836886_156892927
transcript_186177.nic	chr7	-	4259	17	NIC	ENSG00000105983.23	novel	7950	17	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	69.6459797834735	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTTTTCAGATTATAACA	-156887874	True	NA	NA	False	AATAAA	-15	NA	156893219	156681521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_156684164_156688029_156688192_156724111_156724179_156725434_156725526_156725763_156725838_156727929_156728008_156728643_156728721_156734176_156734258_156756392_156756466_156762133_156762199_156763107_156763177_156763668_156763796_156796388_156796493_156826604_156826745_156833752_156833793_156836808_156836886_156892927
transcript_18618.known	chr1	+	10008	10	FSM	ENSG00000198625.14	ENST00000391947.6	10008	10	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_5	9.52190457139047	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGTTGTCATTATTT	204512992	True	NA	10	True	ATTAAA	-17	NA	204516378	204558119	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_204516510_204525483_204525597_204526359_204526435_204530683_204530818_204532190_204532247_204538208_204538309_204542783_204542945_204544534_204544685_204546796_204546878_204549112
transcript_186181.nic	chr7	-	3325	17	NIC	ENSG00000105983.23	novel	7950	17	NA	NA	-3	-245	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	69.6459797834735	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAATAAAATTCAGCTCTT	-156887874	True	NA	-30	True	CATAAA	-18	NA	156893219	156682455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_156684164_156688029_156688192_156724111_156724179_156725434_156725526_156725763_156725838_156727929_156728008_156728643_156728721_156734176_156734258_156756392_156756466_156762133_156762199_156763107_156763177_156763668_156763796_156796388_156796493_156826604_156826745_156833752_156833793_156836808_156836886_156892927
transcript_186183.nic	chr7	-	2842	17	NIC	ENSG00000105983.23	novel	7950	17	NA	NA	-3	52	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	69.6459797834735	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGTCAACCATCCACT	-156887874	True	NA	0	True	AATAAA	-16	NA	156893219	156682938	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_156684164_156688029_156688192_156724111_156724179_156725434_156725526_156725763_156725838_156727929_156728008_156728643_156728721_156734176_156734258_156756392_156756466_156762133_156762199_156763107_156763177_156763668_156763796_156796388_156796493_156826604_156826745_156833752_156833793_156836808_156836886_156892927
transcript_186185.nic	chr7	-	2605	17	NIC	ENSG00000105983.23	novel	7950	17	NA	NA	-3	-185	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	69.6459797834735	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTAGAAACTCCTCTTTC	-156887874	True	NA	-2	True	TATAAA	-16	NA	156893219	156683175	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_156684164_156688029_156688192_156724111_156724179_156725434_156725526_156725763_156725838_156727929_156728008_156728643_156728721_156734176_156734258_156756392_156756466_156762133_156762199_156763107_156763177_156763668_156763796_156796388_156796493_156826604_156826745_156833752_156833793_156836808_156836886_156892927
transcript_186199.nic	chr7	-	2680	16	NIC	ENSG00000105983.23	novel	7950	17	NA	NA	-3	52	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	91.0646656685969	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGTCAACCATCCACT	-156887874	True	NA	0	True	AATAAA	-16	NA	156893219	156682938	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_156684164_156724111_156724179_156725434_156725526_156725763_156725838_156727929_156728008_156728643_156728721_156734176_156734258_156756392_156756466_156762133_156762199_156763107_156763177_156763668_156763796_156796388_156796493_156826604_156826745_156833752_156833793_156836808_156836886_156892927
transcript_1862.known	chr1	+	4302	16	FSM	ENSG00000069424.16	ENST00000378097.6	4302	16	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	11.4833212385035	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGCTCCTCTCATTTC	NA	False	NA	21	True	AATAAA	-29	NA	5992261	6101193	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_5992789_6040516_6040646_6041830_6041873_6072754_6072799_6073732_6073771_6082194_6082275_6085203_6085249_6087466_6087512_6089007_6089052_6090388_6090476_6094399_6094486_6095322_6095444_6095529_6095625_6096635_6096757_6097268_6097358_6098484
transcript_186213.nic	chr7	-	2886	3	ISM	ENSG00000105983.23	ENST00000434453.1	2229	5	-3	9035	-3	2202	5prime_fragment	FALSE	canonical	0	0	junction_1	138	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGGGTAGGGTGCTTGAT	-156887874	True	NA	NA	False	ATTAAA	-30	NA	156893219	156831275	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_156833793_156836808_156836886_156892927
transcript_186216.known	chr7	+	6082	11	FSM	ENSG00000146909.8	ENST00000275820.4	6082	11	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_6	9.73858305915188	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGAGTAACAGTGAATGT	156946407	True	NA	10	True	AATAAA	-20	NA	156949711	156973176	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_156950725_156952473_156952599_156954102_156954299_156959850_156960175_156962150_156962262_156963007_156963176_156963904_156964027_156966269_156966403_156966960_156967093_156969086_156969197_156969528
transcript_186226.nic	chr7	+	2117	6	ISM	ENSG00000146909.8	ENST00000275820.4	6082	11	-3	9824	-3	0	5prime_fragment	FALSE	canonical	3	55	junction_3	7.97496081495075	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGTTGTATCTTTTTA	156946404	True	NA	10	True	NA	NA	NA	156949708	156963352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_+_156950725_156952473_156952599_156954102_156954299_156959850_156960175_156962150_156962262_156963007
transcript_186231.nnic	chr7	+	4924	24	NNC	ENSG00000009335.18	novel	5214	23	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	58.0177927209552	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGTAGTCTTGATATACA	NA	False	NA	8	True	AATAAA	-18	NA	157138905	157269116	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_157139171_157139226_157139339_157163809_157163864_157169047_157169123_157170303_157170451_157174918_157175035_157178689_157178848_157181517_157181672_157182107_157182329_157183877_157184030_157186833_157187022_157201720_157201808_157207397_157207556_157207702_157207936_157216866_157216972_157220688_157220777_157223253_157223352_157225406_157225540_157231079_157231328_157248367_157248581_157253953_157254143_157254243_157254311_157256913_157257045_157267584
transcript_186232.nnic	chr7	+	5178	24	NNC	ENSG00000009335.18	novel	5214	23	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	58.0177927209552	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGTTGGAGTCCTACC	NA	False	NA	23	True	ATTAAA	-16	NA	157138905	157269370	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr7_+_157139171_157139226_157139339_157163809_157163864_157169047_157169123_157170303_157170451_157174918_157175035_157178689_157178848_157181517_157181672_157182107_157182329_157183877_157184030_157186833_157187022_157201720_157201808_157207397_157207556_157207702_157207936_157216866_157216972_157220688_157220777_157223253_157223352_157225406_157225540_157231079_157231328_157248367_157248581_157253953_157254143_157254243_157254311_157256913_157257045_157267584
transcript_186233.known	chr7	+	5214	23	FSM	ENSG00000009335.18	ENST00000348165.10	5214	23	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_4	24.6083789398974	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGTTGGAGTCCTACC	157131868	True	NA	23	True	ATTAAA	-16	NA	157138925	157269370	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_157139339_157163809_157163864_157169047_157169123_157170303_157170451_157174918_157175035_157178689_157178848_157181517_157181672_157182107_157182329_157183877_157184030_157186833_157187022_157201720_157201808_157207397_157207556_157207702_157207936_157216866_157216972_157220688_157220777_157223253_157223352_157225406_157225540_157231079_157231328_157248367_157248581_157253953_157254143_157254243_157254311_157256913_157257045_157267584
transcript_18625.known	chr1	-	469	3	FSM	ENSG00000170382.12	ENST00000496057.1	469	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTGCCTGCCAGATCCG	-204685348	False	NA	NA	False	NA	NA	NA	204685366	204619899	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_204620219_204633143_204633247_204685319
transcript_186253.known	chr7	+	2489	10	FSM	ENSG00000105993.15	ENST00000262177.9	2489	10	0	0	0	0	multi-exon	FALSE	canonical	3	1378	junction_8	856.898671567026	1019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGCCTGCTGTCCTTTGT	157327664	True	NA	103	True	AATAAA	-21	NA	157337003	157417439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_157337145_157358546_157358638_157363160_157363271_157366501_157366562_157367372_157367484_157382245_157382378_157384866_157385009_157385540_157385612_157409794_157410002_157416015
transcript_186263.known	chr7	+	852	8	FSM	ENSG00000105993.15	ENST00000417758.5	852	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	1197.17642298665	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGGTAAGGAGCAGCTG	157327670	True	NA	NA	False	AAGAAA	-43	NA	157337009	157385605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_157337151_157358546_157358638_157363160_157363271_157366501_157366562_157367372_157367484_157382245_157382378_157384866_157385009_157385540
transcript_186266.known	chr7	+	1609	8	FSM	ENSG00000105993.15	ENST00000429029.6	1609	8	0	0	0	0	multi-exon	FALSE	canonical	3	3190	junction_7	202.265636614582	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTTGTGTCTGTGTAT	157327626	True	NA	29	True	AATAAA	-41	NA	157336965	157386324	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_157337145_157358546_157358638_157363160_157363271_157366501_157366562_157367372_157367484_157382245_157382378_157384866_157385009_157385540
transcript_18627.known	chr1	-	3468	2	FSM	ENSG00000170382.12	ENST00000367177.4	3468	2	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTGAGTATTGAGTGTG	-204685321	True	NA	NA	False	AATAAA	-42	NA	204685738	204617169	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_204620219_204685319
transcript_186270.known	chr7	+	1159	7	FSM	ENSG00000105993.15	ENST00000443280.5	1159	7	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	1382.9424749023	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGAGGCTTTCTGTGGCG	157327685	True	NA	NA	False	NA	NA	NA	157337024	157416475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_157337145_157358546_157358638_157363160_157363271_157366501_157366562_157367372_157367484_157409794_157410002_157416015
transcript_18628.nic	chr1	+	5393	26	NIC	ENSG00000163531.17	novel	10336	30	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_19	14.0971486478649	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATTAGCAATGCTTGCAT	204827553	True	NA	17	True	ATTAAA	-31	NA	204828621	205018371	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_204828783_204920631_204920741_204944225_204944407_204950556_204950575_204952010_204952117_204954187_204954385_204954828_204954952_204957655_204957827_204968248_204968361_204968797_204968983_204970615_204970748_204973275_204973420_204974178_204974291_204974656_204974824_204975270_204975419_204976670_204976796_204977680_204977726_204978967_204979070_204979361_204979560_204980369_204980441_204981797_204982021_204987417_204987541_204988632_204988807_205009556_205009689_205012796_205012867_205016307
transcript_186284.nic	chr7	-	1973	3	ISM	ENSG00000155093.19	ENST00000389416.8	4692	22	1018636	0	52434	0	3prime_fragment	FALSE	canonical	3	25	junction_1	1	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACATTCAGGTGGTCTTTA	-157568980	True	NA	-4	True	ATTAAA	-10	NA	157569075	157539060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr7_-_157540786_157548945_157549020_157568901
transcript_186297.known	chr7	-	3957	29	FSM	ENSG00000146918.20	ENST00000409423.5	3957	29	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_28	156.934325923493	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCATTTGTTTATTTGAAA	-158693610	True	NA	-4	True	AATAAA	-12	NA	158704804	158631313	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_158631718_158644288_158644389_158645518_158645620_158646459_158646564_158650831_158650973_158652292_158652481_158654594_158654695_158655117_158655259_158655338_158655456_158656259_158656434_158656551_158656706_158658337_158658409_158662193_158662368_158664183_158664297_158664527_158664751_158671513_158671667_158675476_158675657_158679959_158680086_158680720_158680817_158683299_158683387_158686171_158686242_158687347_158687443_158689818_158689954_158690567_158690723_158692841_158692957_158693308_158693498_158701821_158701939_158703649_158703703_158704723
transcript_1863.known	chr1	+	2134	16	FSM	ENSG00000069424.16	ENST00000428161.6	2134	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	11.1223498716174	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCAGGAATCTGGGGCCT	NA	False	NA	NA	False	NA	NA	NA	6026012	6099119	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_6026446_6040516_6040646_6041830_6041873_6072754_6072799_6073732_6073771_6082194_6082275_6085203_6085249_6087466_6087512_6089007_6089052_6090388_6090476_6094399_6094486_6095322_6095444_6095529_6095625_6096635_6096757_6097268_6097358_6098484
transcript_186305.known	chr7	-	4049	28	FSM	ENSG00000146918.20	ENST00000356309.8	4049	28	0	0	0	0	multi-exon	TRUE	canonical	3	550	junction_27	63.5442448711245	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTCTACCAAAAATACAAAAT	-158693610	True	NA	NA	False	NA	NA	NA	158704804	158631168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_158631718_158644288_158644389_158645518_158645620_158646459_158646564_158650831_158650973_158652292_158652481_158654594_158654695_158655117_158655259_158655338_158655456_158656259_158656434_158656551_158656706_158658337_158658409_158662193_158662368_158664183_158664297_158664527_158664751_158671513_158671667_158675476_158675657_158679959_158680086_158680720_158680817_158683299_158683387_158686171_158686242_158687347_158687443_158689818_158689954_158690567_158690723_158692841_158692957_158693308_158693498_158701821_158701939_158704723
transcript_186312.nic	chr7	-	3736	27	NIC	ENSG00000146918.20	novel	3957	29	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	2	29	junction_12	135.0794692681	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCATTTGTTTATTTGAAA	-158693616	True	NA	-4	True	AATAAA	-12	NA	158704810	158631313	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_158631718_158644288_158644389_158645518_158645620_158646459_158646564_158650831_158650973_158652292_158652481_158654594_158654695_158655117_158655259_158655338_158655456_158656259_158656434_158656551_158656706_158658337_158658409_158664183_158664297_158664527_158664751_158671513_158671667_158675476_158675657_158679959_158680086_158680720_158680817_158683299_158683387_158686171_158686242_158687347_158687443_158689818_158689954_158690567_158690723_158692841_158692957_158693308_158693498_158701821_158701939_158704723
transcript_186317.nic	chr7	-	3794	27	NIC	ENSG00000146918.20	novel	3957	29	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	124	junction_4	119.502896649798	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCATTTGTTTATTTGAAA	-158693641	True	NA	-4	True	AATAAA	-12	NA	158704835	158631313	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr7_-_158631718_158644288_158644389_158645518_158645620_158646459_158646564_158652292_158652481_158654594_158654695_158655117_158655259_158655338_158655456_158656259_158656434_158656551_158656706_158658337_158658409_158662193_158662368_158664183_158664297_158664527_158664751_158671513_158671667_158675476_158675657_158679959_158680086_158680720_158680817_158683299_158683387_158686171_158686242_158687347_158687443_158689818_158689954_158690567_158690723_158692841_158692957_158693308_158693498_158701821_158701939_158704723
transcript_186333.known	chr7	-	5902	23	FSM	ENSG00000117868.18	ENST00000275418.13	5902	23	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_10	36.8685401961936	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGATTTGTTTTTCTCT	-158826582	True	NA	-6	True	AATAAA	-18	NA	158829509	158730996	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_158734253_158734421_158734472_158735502_158735609_158737047_158737180_158739022_158739122_158741522_158741897_158743528_158743679_158748193_158748281_158749648_158749724_158752780_158752844_158759485_158759582_158760057_158760148_158761495_158761545_158763082_158763166_158764676_158764854_158767653_158767775_158773340_158773397_158788003_158788094_158788344_158788418_158793649_158793727_158797941_158798077_158799030_158799073_158829088
transcript_186337.known	chr7	-	5957	22	FSM	ENSG00000117868.18	ENST00000652148.1	5957	22	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_9	49.9014448188761	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGATTTGTTTTTCTC	-158829613	False	NA	-7	True	AATAAA	-17	NA	158829628	158730997	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_158734253_158734421_158734472_158735502_158735609_158737047_158737180_158739022_158739122_158741522_158741897_158743528_158743679_158748193_158748281_158749648_158749724_158759485_158759582_158760057_158760148_158761495_158761545_158763082_158763166_158764676_158764854_158767653_158767775_158773340_158773397_158788003_158788094_158788344_158788418_158793649_158793727_158797941_158798077_158799030_158799073_158829088
transcript_186343.known	chr7	+	3789	25	FSM	ENSG00000126870.16	ENST00000407559.8	3789	25	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_4	25.3950727941903	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTCTGCCAATAGTGTT	158856539	False	NA	6	True	ATTAAA	-20	NA	158856557	158946189	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_+_158856751_158869854_158869909_158871141_158871563_158876608_158876692_158879683_158879990_158884563_158884620_158887020_158887076_158891264_158891334_158901738_158901817_158902375_158902596_158905988_158906092_158911549_158911680_158912984_158913097_158914232_158914322_158918739_158918870_158922376_158922550_158923570_158923734_158926186_158926301_158926401_158926464_158926991_158927044_158930454_158930516_158934128_158934229_158934417_158934550_158941924_158942149_158945580
transcript_186366.known	chr7	-	1926	13	FSM	ENSG00000106018.14	ENST00000402066.5	1926	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_12	13.1938011539089	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGGCAGGTCAGCGCGGT	-159144020	True	NA	-69	True	GGGGCT	-40	NA	159144859	159030517	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_159030790_159031827_159031870_159031937_159032068_159034212_159034305_159034580_159034651_159035951_159036013_159036751_159036903_159043034_159043177_159058480_159058579_159103756_159103855_159109811_159109920_159142445_159142546_159144297
transcript_186367.known	chr7	-	3854	13	FSM	ENSG00000106018.14	ENST00000262178.7	3854	13	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	8.71261856287891	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGAGTAAGAACTTGCTC	-159144028	True	NA	1	True	AATAAA	-20	NA	159144867	159028174	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr7_-_159030790_159031827_159031870_159031937_159032068_159034212_159034305_159034580_159034651_159035951_159036013_159036751_159036903_159043034_159043177_159058480_159058579_159103756_159103855_159109811_159109920_159142445_159142546_159144720
transcript_18637.known	chr1	+	2462	16	FSM	ENSG00000163531.17	ENST00000403080.5	2462	16	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	11.1586538415508	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAAGACTGAGTTTGTG	204827626	True	NA	3	True	ATTAAA	-14	NA	204828694	204977139	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_204828783_204920631_204920741_204944225_204944407_204950556_204950575_204952010_204952117_204954187_204954385_204954828_204954952_204957655_204957827_204968248_204968361_204968797_204968983_204970615_204970748_204973275_204973420_204974178_204974291_204974656_204974824_204975270_204975419_204976670
transcript_18638.nnic	chr1	+	2613	16	NNC	ENSG00000163531.17	novel	2462	16	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	17.1160743162677	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAAGACTGAGTTTGTG	204827553	True	NA	3	True	ATTAAA	-14	NA	204828621	204977139	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_204828783_204920631_204920741_204944225_204944407_204951652_204951749_204952010_204952117_204954187_204954385_204954828_204954952_204957655_204957827_204968248_204968361_204968797_204968983_204970615_204970748_204973275_204973420_204974178_204974291_204974656_204974824_204975270_204975419_204976670
transcript_186385.known	chr8	-	370	3	FSM	ENSG00000223508.5	ENST00000606507.1	370	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGGCCTCTGACGGTTTT	-231996	True	NA	NA	False	AATAAA	-13	NA	232231	230007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_230171_230803_230908_232128
transcript_186386.known	chr8	-	736	3	FSM	ENSG00000223508.5	ENST00000606975.1	736	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTTCATAAGAGTGACA	-231976	True	NA	NA	False	CATAAA	-8	NA	232211	213185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_213711_219289_219418_232128
transcript_186387.known	chr8	+	10356	10	FSM	ENSG00000147364.17	ENST00000350302.8	10356	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	12.2877033786216	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTGTACTCGTTACTT	406109	True	NA	5	True	ATTAAA	-16	NA	406957	477967	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_407067_413072_413214_431340_431445_432885_432936_435614_435708_449989_450084_451268_451454_458368_458552_463006_463151_468714
transcript_186389.known	chr8	+	2360	9	FSM	ENSG00000147364.17	ENST00000352684.2	2360	9	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	21.821720830402	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAATAGGACTAAAAAAAG	NA	False	NA	NA	False	AATAAA	-20	NA	406807	469871	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_407067_413072_413214_431340_431445_435614_435708_449989_450084_451268_451454_458368_458552_463006_463151_468714
transcript_186390.nic	chr8	+	325	3	ISM	ENSG00000147364.17	ENST00000352684.2	2360	9	147	38459	0	-4288	5prime_fragment	FALSE	canonical	3	33	junction_2	14	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACCATTTTAGAAATGACA	406106	True	NA	NA	False	AAAAAG	-7	NA	406954	431412	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_407067_413072_413214_431340
transcript_186391.nnic	chr8	-	3947	3	NNC	ENSG00000180190.13	novel	2622	5	NA	NA	-36	19682	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	269.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATTTAGGATATGGTTC	-536437	True	NA	-8	True	AATAAA	-16	NA	544870	470120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_-_473743_494493_494598_544649
transcript_186395.known	chr8	-	630	1	FSM	ENSG00000272293.1	ENST00000607549.1	630	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACATCATTTTTGAGATA	-451331	False	NA	0	True	AATAAA	-28	NA	451343	450713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_450700_451300
transcript_18640.nnic	chr1	+	2413	15	NIC	ENSG00000163531.17	novel	2462	16	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	16.5375268984926	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAAGACTGAGTTTGTG	204827566	True	NA	3	True	ATTAAA	-14	NA	204828634	204977139	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_204828783_204944225_204944407_204950556_204950575_204952010_204952117_204954187_204954385_204954828_204954952_204957655_204957827_204968248_204968361_204968797_204968983_204970615_204970748_204973275_204973420_204974178_204974291_204974656_204974824_204975270_204975419_204976670
transcript_186403.nnic	chr8	-	995	3	NNC	ENSG00000180190.13	novel	2622	5	NA	NA	-68	33340	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	251	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGACGAATGTTTGATTC	-544566	False	NA	-16	True	AGTAAA	-14	NA	544902	456462	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_-_457101_494493_494598_544649
transcript_186404.known	chr8	-	3088	3	FSM	ENSG00000180190.13	ENST00000324079.11	3088	3	0	0	0	0	multi-exon	FALSE	canonical	3	492	junction_1	28	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTATTGGTTTGCATG	-536401	True	NA	-9	True	AATAAA	-19	NA	544834	489945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_492745_494493_494598_544649
transcript_18641.nic	chr1	+	2516	15	NIC	ENSG00000163531.17	novel	4957	24	NA	NA	-157	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	16.1586521967745	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAAGACTGAGTTTGTG	204929214	False	NA	3	True	ATTAAA	-14	NA	204929251	204977139	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_204929503_204944225_204944407_204950556_204950575_204952010_204952117_204954187_204954385_204954828_204954952_204957655_204957827_204968248_204968361_204968797_204968983_204970615_204970748_204973275_204973420_204974178_204974291_204974656_204974824_204975270_204975419_204976670
transcript_186411.nnic	chr8	-	1949	7	NNC	ENSG00000104714.14	novel	1798	6	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	147.368774017957	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAATATAGTTGAGTTT	-726123	True	NA	NA	False	ATTAAA	-18	NA	731192	664199	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_-_664677_668597_668793_672021_672205_673288_674048_692477_692613_715860_716008_731139
transcript_186412.known	chr8	-	1798	6	FSM	ENSG00000104714.14	ENST00000262109.8	1798	6	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_2	52.7658980782096	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAATATAGTTGAGTTT	-726155	True	NA	NA	False	ATTAAA	-18	NA	731224	664199	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_664677_668597_668793_673288_674048_692477_692613_715860_716008_731139
transcript_186414.nnic	chr8	-	645	5	NNC	ENSG00000104714.14	novel	1798	6	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	158.005340099631	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAACTGAAAAAGAAACAG	-726123	True	NA	NA	False	AATAAA	-5	NA	731192	673864	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_-_674048_690969_691097_692477_692613_715860_716008_731139
transcript_186419.nic	chr8	-	577	4	ISM	ENSG00000104714.14	ENST00000262109.8	1798	6	-27	9665	-27	0	5prime_fragment	FALSE	canonical	3	278	junction_1	35.5933826558939	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAACTGAAAAAGAAACAG	-726182	True	NA	NA	False	AATAAA	-5	NA	731251	673864	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_674048_692477_692613_715860_716008_731139
transcript_186421.nic	chr8	-	456	4	ISM	ENSG00000104714.14	ENST00000262109.8	1798	6	-27	9786	-27	-121	5prime_fragment	FALSE	canonical	3	278	junction_1	35.5933826558939	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATCCCAATAATGT	-726182	True	NA	NA	False	CATAAA	-13	NA	731251	673985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_674048_692477_692613_715860_716008_731139
transcript_18644.known	chr1	-	4367	14	FSM	ENSG00000117222.14	ENST00000264515.11	4367	14	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	15.1302041269468	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGTAGATGTTTATTTG	-205118165	True	NA	NA	False	AATAAA	-21	NA	205121978	205086141	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_205088816_205094872_205095065_205096681_205096912_205097325_205097396_205098988_205099107_205099740_205099813_205099910_205100065_205100151_205100272_205101599_205101710_205103856_205104020_205105027_205105169_205114788_205114962_205115857_205115884_205121854
transcript_186441.known	chr8	+	1305	4	FSM	ENSG00000182372.10	ENST00000520991.3	1305	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	41.9867704031745	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCTGTCAGTTTAGCCGC	1761491	True	NA	21	True	AAGAAA	-25	NA	1763831	1780772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_1763886_1770931_1771598_1772923_1772986_1780249
transcript_186447.known	chr8	+	1958	4	FSM	ENSG00000182372.10	ENST00000635970.1	1958	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	53.8578375602536	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGTTTACAGAACCCAAA	1761474	True	NA	-9	True	AATAAA	-6	NA	1763814	1782681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_1763886_1770931_1771598_1780249_1781145_1782355
transcript_18646.known	chr1	-	4290	14	FSM	ENSG00000117222.14	ENST00000367164.1	4290	14	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	16.0984397788609	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGTAGATGTTTATTTG	-205118202	True	NA	NA	False	AATAAA	-21	NA	205122015	205086141	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_205088816_205094986_205095065_205096681_205096912_205097325_205097396_205098988_205099107_205099740_205099813_205099910_205100065_205100151_205100272_205101599_205101710_205103856_205104020_205105027_205105169_205114788_205114962_205115857_205115884_205121854
transcript_186460.known	chr8	+	1807	3	FSM	ENSG00000182372.10	ENST00000635751.1	1807	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	58	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACACCTGTAATCCCAGC	1761436	True	NA	NA	False	ACTAAA	-28	NA	1763776	1781225	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_1763942_1770931_1771598_1780249
transcript_186465.known	chr8	+	7084	3	FSM	ENSG00000182372.10	ENST00000331222.6	7084	3	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	11.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTCTCTATTTCCTTTCT	1761448	True	NA	10	True	AATATA	-43	NA	1763788	1786570	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_1763886_1770931_1771598_1780249
transcript_186468.known	chr8	+	1769	3	FSM	ENSG00000182372.10	ENST00000519254.2	1769	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	58.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCTGAGATCGCACCACT	1761419	True	NA	NA	False	NA	NA	NA	1763759	1781300	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_1763812_1770931_1771598_1780249
transcript_186469.known	chr8	+	1897	3	FSM	ENSG00000182372.10	ENST00000637156.1	1897	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	55.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTCTCTCTCAAAAAAAAA	1761459	True	NA	NA	False	NA	NA	NA	1763799	1781354	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_1763926_1770931_1771598_1780249
transcript_186472.known	chr8	-	579	2	FSM	ENSG00000253982.3	ENST00000518481.2	621	2	42	0	36	0	multi-exon	FALSE	canonical	3	99	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACATGTGGGAAAACGTTG	-1763285	False	NA	-20	True	AATAAA	-27	NA	1763297	1762624	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_1762929_1763022
transcript_186474.known	chr8	+	5648	29	FSM	ENSG00000104728.16	ENST00000349830.8	5648	29	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_8	51.3241499427603	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGATGAGTTGCCTCTTT	NA	False	NA	30	True	AATAAA	-22	NA	1823925	1958641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_1824114_1843352_1843437_1857959_1858116_1859896_1860185_1864372_1864437_1866525_1866603_1869193_1869251_1876570_1876735_1880047_1880165_1882634_1882750_1885600_1885708_1893568_1893647_1894392_1894573_1896332_1896450_1898432_1898526_1903280_1903452_1905570_1905717_1909294_1909471_1922963_1923080_1923467_1923596_1923773_1923875_1925282_1925405_1926376_1926464_1928426_1928651_1929285_1929444_1933799_1933943_1945480_1945656_1952704_1952828_1956748
transcript_186480.known	chr8	+	5472	28	FSM	ENSG00000104728.16	ENST00000520359.5	5472	28	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_4	44.9339707614969	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGATGAGTTGCCTCTTT	1823960	True	NA	30	True	AATAAA	-22	NA	1823987	1958641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_1824114_1843352_1843437_1857959_1858116_1859896_1860185_1864369_1864437_1866525_1866603_1869193_1869251_1876570_1876735_1882634_1882750_1885600_1885708_1893568_1893647_1894392_1894573_1896332_1896450_1898432_1898526_1903280_1903452_1905570_1905717_1909294_1909471_1922963_1923080_1923467_1923596_1923773_1923875_1925282_1925405_1926376_1926464_1928426_1928651_1929285_1929444_1933799_1933943_1945480_1945656_1952704_1952828_1956748
transcript_186481.nic	chr8	+	5534	28	NIC	ENSG00000104728.16	novel	5648	29	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_4	46.1197522767478	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGATGAGTTGCCTCTTT	NA	False	NA	30	True	AATAAA	-22	NA	1823922	1958641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_1824114_1843352_1843437_1857959_1858116_1859896_1860185_1864372_1864437_1866525_1866603_1869193_1869251_1876570_1876735_1882634_1882750_1885600_1885708_1893568_1893647_1894392_1894573_1896332_1896450_1898432_1898526_1903280_1903452_1905570_1905717_1909294_1909471_1922963_1923080_1923467_1923596_1923773_1923875_1925282_1925405_1926376_1926464_1928426_1928651_1929285_1929444_1933799_1933943_1945480_1945656_1952704_1952828_1956748
transcript_186498.nic	chr8	+	1855	15	ISM	ENSG00000104728.16	ENST00000520359.5	5472	28	-65	55280	-3	-735	5prime_fragment	FALSE	canonical	3	55	junction_4	29.9060604055364	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAGTTAAATGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	1823922	1903361	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_1824114_1843352_1843437_1857959_1858116_1859896_1860185_1864369_1864437_1866525_1866603_1869193_1869251_1876570_1876735_1882634_1882750_1885600_1885708_1893568_1893647_1894392_1894573_1896332_1896450_1898432_1898526_1903280
transcript_1865.known	chr1	+	3878	15	FSM	ENSG00000069424.16	ENST00000666163.1	3878	15	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	7.02764221499934	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGACTTTTTGCTCCTCTC	5992206	True	NA	16	True	AATAAA	-24	NA	5992638	6101188	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_5992789_6040516_6040646_6072754_6072799_6073732_6073771_6082194_6082275_6085203_6085249_6087466_6087512_6089007_6089052_6090388_6090476_6094399_6094486_6095322_6095444_6095529_6095625_6096635_6096757_6097268_6097358_6098484
transcript_186513.known	chr8	+	8008	14	FSM	ENSG00000147316.15	ENST00000344683.10	8008	14	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_12	45.272612774785	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCAGTCTCACTCTGGAA	6404369	True	NA	NA	False	AATAAA	-27	NA	6406626	6648508	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_6406690_6409278_6409371_6414764_6414884_6431498_6431587_6436047_6436163_6438952_6439097_6442066_6442157_6444392_6445548_6455142_6455253_6477593_6477632_6480713_6480877_6499851_6499930_6621453_6621692_6642993
transcript_186516.known	chr8	+	3773	8	FSM	ENSG00000147316.15	ENST00000519480.6	3773	8	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	19.9407284987591	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTACTTGTTGCTGTTGT	6404334	True	NA	27	True	AATAAA	-31	NA	6406591	6447419	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_6406690_6409278_6409371_6414764_6414884_6431498_6431587_6436047_6436163_6438952_6439097_6442066_6442157_6444392
transcript_186521.known	chr8	-	2413	2	FSM	ENSG00000246089.4	ENST00000500118.3	2415	2	2	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGGGAGATTTTGGAG	-6405515	True	NA	NA	False	AATAAA	-25	NA	6406548	6403550	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_6405121_6405705
transcript_186522.known	chr8	-	1137	1	FSM	ENSG00000246089.4	ENST00000606853.1	1137	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGTTATGGTTTACTT	-6405509	True	NA	-3	True	AATAAA	-15	NA	6406542	6405405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_6405400_6406500
transcript_186524.known	chr8	+	5237	8	FSM	ENSG00000155189.12	ENST00000285518.11	5237	8	0	0	0	0	multi-exon	FALSE	canonical	3	825	junction_2	53.0575351935644	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGTGATAAAAAGTTATTT	6706906	True	NA	13	True	AATAAA	-22	NA	6708641	6761503	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_6708888_6724869_6724940_6730710_6730827_6732560_6732651_6741660_6741752_6747669_6747829_6755050_6755175_6757162
transcript_186530.known	chr8	-	4773	7	FSM	ENSG00000275591.5	ENST00000618742.3	4773	7	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_6	3.02305952453618	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGCTGAGCACCTATCA	-6834889	True	NA	NA	False	AATAAA	-20	NA	6835524	6808516	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_6812340_6815806_6815919_6821868_6822039_6823520_6823731_6825164_6825350_6832716_6832901_6835435
transcript_186540.known	chr8	-	4238	6	FSM	ENSG00000215374.6	ENST00000664195.1	4238	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	4.44522215417857	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTGTCTCCCTATACT	-7354919	True	NA	NA	False	NA	NA	NA	7355359	7298744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_7302172_7324296_7324365_7324821_7324890_7325136_7325199_7349082_7349147_7354810
transcript_186541.known	chr8	+	337	2	FSM	ENSG00000171711.3	ENST00000302247.3	337	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTATCCTAGTAATTGTG	NA	False	NA	NA	False	ATTAAA	-24	NA	7894676	7896716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_7894771_7896473
transcript_186543.nnic	chr8	+	2548	3	NNC	ENSG00000284606.1	novel	3196	4	NA	NA	-262	-112837	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGGCAGTTA	NA	False	NA	NA	False	NA	NA	NA	8059309	8067690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_8059675_8065119_8065188_8065575
transcript_186584.known	chr8	+	894	7	FSM	ENSG00000173295.9	ENST00000523992.2	894	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	11.2101144805335	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCCCCCACCCCAGCCT	8228372	True	NA	NA	False	NA	NA	NA	8228604	8237275	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_8228701_8230842_8230906_8232793_8232875_8234482_8234585_8235815_8235950_8236031_8236300_8237125
transcript_186586.known	chr8	-	4845	6	FSM	ENSG00000275342.5	ENST00000615670.5	4845	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	4.19523539268061	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAGCTCTTTATCCTTAA	-8385987	True	NA	-20	True	ATTAAA	-23	NA	8386439	8317735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_8319303_8327709_8328462_8339477_8339636_8376246_8378079_8381417_8381835_8386320
transcript_186588.nic	chr8	-	3443	3	ISM	ENSG00000275342.5	ENST00000615670.5	4845	6	-21	57457	-21	-57457	5prime_fragment	FALSE	canonical	2	11	junction_2	4	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTTTTGTGTTAGCATG	-8386008	True	NA	NA	False	AAGAAA	-5	NA	8386460	8375192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_8378079_8381417_8381835_8386320
transcript_186589.known	chr8	+	2160	1	FSM	ENSG00000253958.2	ENST00000519106.2	2160	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTCAGTATAGCCACAAAA	8701236	True	NA	5	True	AATAAA	-15	NA	8701936	8704096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_8701900_8704100
transcript_186594.known	chr8	+	4521	7	FSM	ENSG00000104626.15	ENST00000250263.8	4521	7	0	0	0	0	multi-exon	TRUE	canonical	3	125	junction_6	12.1209185570511	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCATTCTCATTTGTTTT	8999662	True	NA	8	True	AATAAA	-14	NA	9002896	9033338	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_9003172_9007969_9008149_9011541_9011753_9016321_9016406_9018296_9018407_9020349_9020465_9029791
transcript_18660.known	chr1	-	8010	13	FSM	ENSG00000133059.17	ENST00000367162.8	8010	13	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	4.91313432432789	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTTTCTATCTGTTTGGT	-205211623	False	NA	-9	True	AATAAA	-17	NA	205211702	205142504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_205147746_205148204_205148340_205150679_205150795_205157272_205157387_205159546_205159680_205160113_205160271_205161257_205161388_205162035_205162213_205162922_205163007_205163722_205163956_205169162_205169833_205187417_205187807_205211270
transcript_186600.known	chr8	-	5510	2	FSM	ENSG00000173281.5	ENST00000310455.4	5510	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAAGTGTCCTTCTATTC	-9148777	False	1881	NA	False	AATAAA	-17	NA	9150658	9136254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_9141669_9150562
transcript_186601.known	chr8	-	2334	2	FSM	ENSG00000173281.5	ENST00000519699.1	2334	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAAAAGAGAATTTT	-9149693	True	NA	NA	False	NA	NA	NA	9151574	9139562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_9141669_9151346
transcript_186608.nnic	chr8	-	1739	2	NNC	ENSG00000253252.2	novel	328	2	NA	NA	4	26879	intron_retention	FALSE	canonical	3	84	junction_1	0	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAGTTTATGGAAGAATA	-9182476	False	NA	NA	False	AATAAA	-43	NA	9182515	9153371	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_-_9155059_9182463
transcript_186611.known	chr8	-	328	2	FSM	ENSG00000253252.2	ENST00000521298.2	328	2	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTAGGAAGTCATCAAAAT	-9182480	False	NA	-4	True	AATAAA	-25	NA	9182519	9180250	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_9180523_9182463
transcript_186612.nnic	chr8	+	4530	28	NNC	ENSG00000173273.16	novel	9622	27	NA	NA	-24	-3875	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_27	37.4642033078572	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGGAATAAATTTGTCAT	9551586	True	NA	NA	False	AATAAA	-14	NA	9555887	9773054	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_9556613_9580158_9580384_9615581_9615678_9679950_9679988_9680724_9680801_9704662_9704758_9706186_9706254_9706810_9706998_9708370_9708493_9709954_9710047_9710141_9710221_9720373_9720546_9726640_9726721_9730889_9731036_9733278_9733445_9734864_9735085_9735376_9735487_9748023_9748213_9751608_9751847_9752543_9752627_9761515_9761637_9763146_9763245_9764715_9764791_9765691_9765798_9766238_9766426_9770105_9770263_9772368_9772424_9772528
transcript_186613.known	chr8	+	9622	27	FSM	ENSG00000173273.16	ENST00000310430.11	9622	27	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_8	20.1981676478675	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGTGTGGATAGCAGTT	9551610	True	NA	15	True	AATAAA	-16	NA	9555911	9782346	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_9556613_9580158_9580384_9615581_9615678_9679950_9679988_9680724_9680801_9704662_9704758_9706186_9706254_9706810_9706998_9708370_9708493_9709954_9710047_9710141_9710221_9720373_9720546_9726640_9726721_9730889_9731036_9733278_9733445_9734864_9735085_9735376_9735487_9748023_9748213_9751608_9751847_9752543_9752627_9761515_9761637_9763146_9763245_9764715_9764791_9765691_9765798_9766238_9766426_9770105_9770263_9776649
transcript_186621.known	chr8	+	1964	11	FSM	ENSG00000173273.16	ENST00000520408.5	1964	11	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_8	26.7740546051583	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGATCCTTTAATGTC	9551612	True	NA	NA	False	AATAAA	-15	NA	9555913	9710409	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_9556613_9580158_9580384_9615581_9615678_9679950_9679988_9680724_9680801_9704662_9704758_9706186_9706254_9706810_9706998_9708370_9708493_9709954_9710047_9710141
transcript_186624.nic	chr8	+	1701	10	ISM	ENSG00000173273.16	ENST00000520408.5	1964	11	-26	384	-24	-384	5prime_fragment	FALSE	canonical	3	112	junction_8	27.8208554864871	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTTAATGAAAAAAATAAAG	9551586	True	NA	NA	False	NA	NA	NA	9555887	9710025	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_9556613_9580158_9580384_9615581_9615678_9679950_9679988_9680724_9680801_9704662_9704758_9706186_9706254_9706810_9706998_9708370_9708493_9709954
transcript_186631.known	chr8	-	2913	3	FSM	ENSG00000253230.10	ENST00000653424.1	2913	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	76.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCATCTACAATTCTTTC	-9903356	False	NA	-20	True	AATAAA	-16	NA	9903398	9900063	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_9900199_9900544_9900613_9900688
transcript_186632.known	chr8	-	2903	3	FSM	ENSG00000253230.10	ENST00000665174.1	2903	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	72.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCATCTACAATTCTTTC	-9903356	False	NA	-20	True	AATAAA	-16	NA	9903398	9900063	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_9900199_9900554_9900613_9900688
transcript_186633.known	chr8	-	3001	3	FSM	ENSG00000253230.10	ENST00000519461.2	3001	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	66.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCATCTACAATTCTTTC	-9903356	False	NA	-20	True	AATAAA	-16	NA	9903398	9900063	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_9900287_9900544_9900613_9900688
transcript_186634.known	chr8	-	3252	2	FSM	ENSG00000253230.10	ENST00000654192.1	3252	2	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCCAAGTCCCATCTACAA	-9903356	False	NA	-27	True	AATAAA	-9	NA	9903398	9900070	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_9900613_9900688
transcript_186636.known	chr8	-	3064	2	FSM	ENSG00000253230.10	ENST00000669913.1	3064	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTCCCAAGTCCCAT	-9903356	False	NA	-33	True	AATAAA	-3	NA	9903398	9900076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_9900287_9900544
transcript_186638.known	chr8	-	3334	1	FSM	ENSG00000253230.10	ENST00000517675.1	3334	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCATCTACAATTCTTTC	-9903355	False	NA	-20	True	AATAAA	-16	NA	9903397	9900063	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_9900100_9903400
transcript_186644.known	chr8	+	1512	6	FSM	ENSG00000175806.15	ENST00000317173.9	1512	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	2.71293199325011	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTGACATCTCCTCTGT	10053865	True	NA	12	True	AATAAA	-24	NA	10054291	10428891	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_10054659_10207832_10207902_10245103_10245224_10301533_10301639_10319882_10319990_10428147
transcript_186648.known	chr8	-	1753	6	FSM	ENSG00000258724.1	ENST00000554914.1	1753	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	94.3724536080312	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGTCCCTTCTGGTCCA	-10833464	True	NA	NA	False	NA	NA	NA	10839847	10725398	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_10726667_10826151_10826245_10831664_10831744_10832891_10832985_10834665_10834776_10839737
transcript_186652.known	chr8	-	1546	7	FSM	ENSG00000254093.9	ENST00000314787.8	1546	7	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_2	27.697272228306	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGATTCAGATTGTTCT	-10833492	True	NA	-6	True	ATTAAA	-17	NA	10839875	10764960	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_10765917_10820192_10820270_10826151_10826245_10831664_10831744_10832891_10832985_10834665_10834776_10839737
transcript_186653.known	chr8	-	610	7	FSM	ENSG00000254093.9	ENST00000524114.5	610	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	82.2936814099357	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGAACAAGCCCCAGGTT	-10833388	False	NA	NA	False	NA	NA	NA	10839771	10765822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_10765917_10820192_10820270_10826151_10826245_10831664_10831744_10832891_10832985_10834665_10834776_10839707
transcript_186655.known	chr8	-	1272	6	FSM	ENSG00000254093.9	ENST00000519088.5	1272	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	77.7395652161755	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTTCAGCAAGAGAGTTT	-10833493	True	NA	-10	True	AATAAA	-19	NA	10839876	10765158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_10765917_10826151_10826245_10831664_10831744_10832891_10832985_10834665_10834776_10839737
transcript_186657.known	chr8	-	3215	2	FSM	ENSG00000171056.8	ENST00000304501.2	3215	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTCTATCTTTTGAAATA	-10730455	True	NA	NA	False	AATAAA	-17	NA	10730511	10723767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_10726667_10730195
transcript_186662.known	chr8	+	3503	11	FSM	ENSG00000104643.10	ENST00000530200.1	3503	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	47.1677856168805	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAACAGCCTCACTTTTT	11283739	True	NA	76	True	NA	NA	NA	11284826	11324527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_11285071_11295193_11295303_11297899_11297952_11300022_11300149_11304840_11305015_11306189_11306408_11309526_11309689_11314922_11315065_11316672_11316894_11319686_11319839_11322624
transcript_186665.known	chr8	+	7081	10	FSM	ENSG00000104643.10	ENST00000221086.8	7081	10	0	0	0	0	multi-exon	TRUE	canonical	3	84	junction_9	15.8939385915077	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGGGCTTATTTGAATT	11283728	True	NA	21	True	AATAAA	-33	NA	11284815	11328146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_11285071_11295193_11295303_11300022_11300149_11304840_11305015_11306189_11306408_11309526_11309689_11314922_11315065_11316672_11316894_11319686_11319839_11322624
transcript_186670.known	chr8	+	1960	10	FSM	ENSG00000104643.10	ENST00000526292.1	1960	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	36.9327049017267	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCATTTGTGTTTCATG	11284006	False	NA	-2	True	AATAGA	-11	NA	11285093	11323057	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_11285317_11295193_11295303_11300022_11300149_11304840_11305015_11306189_11306408_11309526_11309689_11314922_11315065_11316672_11316894_11319686_11319839_11322624
transcript_186675.known	chr8	+	1421	8	FSM	ENSG00000154316.16	ENST00000534302.5	1421	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.88441513689613	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTAAGACTCGATTATTC	11347530	True	NA	6	True	ATTAAA	-17	NA	11347644	11366088	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_11347706_11355068_11355179_11356104_11356292_11358135_11358179_11359213_11359285_11361634_11361808_11364719_11364990_11365582
transcript_186678.known	chr8	-	4067	3	FSM	ENSG00000154319.16	ENST00000284486.9	4067	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAGAAAAATGCTTGTCC	-11466723	True	NA	NA	False	AATAAA	-37	NA	11466753	11421475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_11424637_11444030_11444809_11466625
transcript_186679.known	chr8	-	1099	2	FSM	ENSG00000255020.1	ENST00000525867.1	1099	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGGCTTGCCCTTGAAT	-11347438	True	NA	NA	False	AATAAA	-15	NA	11347502	11345747	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_11346641_11347296
transcript_186680.known	chr8	+	3414	7	FSM	ENSG00000136574.19	ENST00000335135.8	3414	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGTCCCTTAGTGGTCTT	11704148	True	NA	8	True	AATAAA	-21	NA	11704203	11760002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_11704305_11707855_11708929_11748918_11749086_11750110_11750237_11755045_11755134_11756934_11757084_11758292
transcript_186681.known	chr8	+	2323	6	FSM	ENSG00000154328.16	ENST00000455213.6	2323	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	66.1350134195193	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGCTGTTTTTGTCTTTAT	11768232	True	NA	12	True	AATAAA	-12	NA	11769698	11787340	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_11769792_11770173_11770336_11771445_11771586_11779597_11779951_11783202_11783400_11785962
transcript_186685.known	chr8	+	2226	5	FSM	ENSG00000154328.16	ENST00000436750.7	2226	5	0	0	0	0	multi-exon	TRUE	canonical	3	98	junction_1	41.105808591974	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTCTTTATTTGGT	NA	False	NA	17	True	AATAAA	-17	NA	11769638	11787345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_11769792_11771445_11771586_11779597_11779951_11783202_11783400_11785962
transcript_186686.known	chr8	+	2699	5	FSM	ENSG00000154328.16	ENST00000284503.7	2699	5	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	40.7246853885945	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTCTTTATTTGGT	11768243	True	NA	17	True	AATAAA	-17	NA	11769709	11787345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_11770336_11771445_11771586_11779597_11779951_11783202_11783400_11785962
transcript_186687.known	chr8	+	2016	4	FSM	ENSG00000154328.16	ENST00000403422.7	2016	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	91.1604202613295	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTCTTTATTTGGT	11768242	True	NA	17	True	AATAAA	-17	NA	11769708	11787345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_11769792_11779597_11779951_11783202_11783400_11785962
transcript_186689.known	chr8	+	2462	9	FSM	ENSG00000079459.13	ENST00000615631.4	2462	9	0	0	0	0	multi-exon	FALSE	canonical	2	136	junction_1	1286.96881639572	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACAGTTCGCTTGAAAG	NA	False	NA	17	True	AATAAA	-25	NA	11795572	11839304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_11796012_11802758_11802932_11808793_11808892_11809666_11809851_11821749_11821879_11826023_11826216_11830243_11830421_11831517_11831671_11838387
transcript_186694.known	chr8	+	1773	9	FSM	ENSG00000079459.13	ENST00000525607.5	1773	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	1690.16707753997	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGGCTCATGGCAGAGCA	11757494	True	NA	NA	False	NA	NA	NA	11802740	11838839	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_11802932_11803321_11803519_11808793_11808892_11809666_11809851_11821749_11821879_11826023_11826216_11830243_11830421_11831517_11831671_11838387
transcript_186698.known	chr8	+	2035	8	FSM	ENSG00000079459.13	ENST00000220584.9	2035	8	0	0	0	0	multi-exon	FALSE	canonical	3	3358	junction_3	338.434812702505	910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCAAGTACAGTTCGCT	11757494	True	NA	11	True	AATAAA	-19	NA	11802740	11839298	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_11802932_11808793_11808892_11809666_11809851_11821749_11821879_11826023_11826216_11830243_11830421_11831517_11831671_11838387
transcript_1867.known	chr1	+	4001	15	FSM	ENSG00000069424.16	ENST00000352527.6	4001	15	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_1	6.1295537008357	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCGGTCTCTGTGACTTTT	NA	False	NA	6	True	AATAAA	-14	NA	6026162	6101178	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_6026446_6040516_6040646_6072754_6072799_6073732_6073771_6082194_6082275_6085203_6085249_6087466_6087512_6089007_6089052_6090388_6090476_6094399_6094486_6095322_6095444_6095529_6095625_6096635_6096757_6097268_6097358_6098484
transcript_186702.known	chr8	+	1596	8	FSM	ENSG00000079459.13	ENST00000525900.5	1596	8	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_1	1313.43512848359	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATCCTACTTAGTATGAT	11757519	True	NA	-42	True	NA	NA	NA	11802765	11838905	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_11802911_11808793_11808892_11809666_11809851_11821749_11821879_11826023_11826216_11830243_11830421_11831517_11831671_11838387
transcript_186711.known	chr8	+	1987	8	FSM	ENSG00000079459.13	ENST00000622850.2	1987	8	0	0	0	0	multi-exon	FALSE	canonical	1	29	junction_1	1393.42203929457	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACAGTTCGCTTGAAAG	11803072	False	NA	17	True	AATAAA	-25	NA	11803088	11839304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_11803226_11808793_11808892_11809666_11809851_11821749_11821879_11826023_11826216_11830243_11830421_11831517_11831671_11838387
transcript_186717.known	chr8	+	1393	7	FSM	ENSG00000079459.13	ENST00000443614.6	1393	7	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	1498.91976844067	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGGGTGCCTCATCCCA	11757492	True	NA	147	True	NA	NA	NA	11802738	11838783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_11802932_11808793_11808892_11809666_11809851_11826023_11826216_11830243_11830421_11831517_11831671_11838387
transcript_18673.known	chr1	-	7739	12	FSM	ENSG00000133059.17	ENST00000367161.7	7739	12	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_1	9.35613114928626	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTTTCTATCTGTTTGGT	-205211487	False	NA	-9	True	AATAAA	-17	NA	205211566	205142504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_205147746_205150679_205150795_205157272_205157387_205159546_205159680_205160113_205160271_205161257_205161388_205162035_205162213_205162922_205163007_205163722_205163956_205169162_205169833_205187417_205187807_205211270
transcript_186746.known	chr8	+	1558	5	FSM	ENSG00000079459.13	ENST00000446331.6	1558	5	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	1729.16907429551	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGCTTTTGACCTTTTA	11802620	False	NA	43	True	TTTAAA	-29	NA	11802642	11839210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_11802911_11826078_11826216_11830243_11830421_11831517_11831671_11838387
transcript_186751.known	chr8	+	642	2	FSM	ENSG00000079459.13	ENST00000527045.1	642	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTTTTGTCCCCAGTA	11757537	True	NA	-15	True	AATAAA	-3	NA	11802783	11803815	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_11802932_11803321
transcript_186752.known	chr8	+	1890	7	FSM	ENSG00000079459.13	ENST00000525954.5	1890	7	0	0	0	0	multi-exon	FALSE	canonical	3	3358	junction_2	363.479213833321	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGAATGTTCGTAATAGT	11808400	False	NA	20	True	ATTAAA	-21	NA	11808416	11838967	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_11808892_11809666_11809851_11821749_11821879_11826023_11826216_11830243_11830421_11831517_11831671_11838387
transcript_186753.known	chr8	+	2660	10	FSM	ENSG00000079459.13	ENST00000618539.4	2660	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1651.84059703856	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACAGTTCGCTTGAAAG	NA	False	NA	17	True	AATAAA	-25	NA	11795572	11839304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_11796012_11802257_11802456_11802758_11802932_11808793_11808892_11809666_11809851_11821749_11821879_11826023_11826216_11830243_11830421_11831517_11831671_11838387
transcript_186754.known	chr8	-	3155	11	FSM	ENSG00000164733.22	ENST00000678929.1	3155	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	184.690010558232	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGGGAGGCCAAGGTGG	-11862841	True	NA	NA	False	NA	NA	NA	11868114	11843211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_11845223_11845660_11845790_11847051_11847169_11847678_11847823_11848066_11848153_11849045_11849165_11850865_11850981_11852609_11852696_11853328_11853480_11857857_11857941_11868000
transcript_186755.known	chr8	-	3835	11	FSM	ENSG00000164733.22	ENST00000678242.1	3835	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_10	177.235323792973	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCATAACCTCAATAAAGT	-11862864	True	NA	-39	True	NA	NA	NA	11868137	11842559	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_11845223_11845660_11845790_11847051_11847169_11847678_11847823_11848066_11848153_11849045_11849165_11850865_11850981_11852609_11852696_11853328_11853480_11864375_11864464_11868000
transcript_186757.known	chr8	-	3733	10	FSM	ENSG00000164733.22	ENST00000353047.11	3733	10	0	0	0	0	multi-exon	TRUE	canonical	3	395	junction_3	32.438355593036	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTTGATTCATTCCATG	-11862814	True	NA	-3	True	AATAAA	-19	NA	11868087	11842523	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_11845223_11845660_11845790_11847051_11847169_11847678_11847823_11848066_11848153_11849045_11849165_11850865_11850981_11852609_11852696_11853328_11853480_11868000
transcript_186759.known	chr8	-	1957	10	FSM	ENSG00000164733.22	ENST00000453527.7	1957	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	144.855824448115	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGATGGGATCTCAGATC	-11862830	True	NA	-5	True	AATAAA	-24	NA	11868103	11844312	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_11845223_11845660_11845787_11847051_11847169_11847678_11847823_11848066_11848153_11849045_11849165_11850865_11850981_11852609_11852696_11853328_11853480_11868000
transcript_186761.known	chr8	+	3002	5	FSM	ENSG00000255052.5	ENST00000653408.1	3002	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	5.02493781056044	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGTGAGTGCACAGAAA	NA	False	NA	NA	False	NA	NA	NA	12115809	12148167	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_12116326_12121986_12122051_12145422_12145547_12145638_12145701_12145931
transcript_186774.known	chr8	-	2096	7	FSM	ENSG00000186523.15	ENST00000448228.7	2403	7	-38	345	7	105	multi-exon	FALSE	canonical	1	3	junction_2	18.6227161164948	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCACAACCCCCCTCACT	-12194107	True	NA	NA	False	NA	NA	NA	12194120	12182450	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_12183707_12185375_12185526_12186351_12186618_12186699_12186834_12189807_12189889_12191778_12191842_12193974
transcript_186777.known	chr8	-	2254	6	FSM	ENSG00000186523.15	ENST00000534187.6	2254	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	14.1223227551278	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACACCCCTTAATCTACA	-12194092	True	NA	NA	False	AATAAA	-17	NA	12194105	12182109	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_12183707_12185375_12185526_12186699_12186834_12189807_12189889_12191778_12191842_12193876
transcript_186779.known	chr8	+	1361	2	FSM	ENSG00000255495.1	ENST00000528514.1	1361	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAATAGCTATTGTCTTTC	12194120	False	NA	NA	False	GATAAA	-25	NA	12194466	12196280	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_12195438_12195890
transcript_186796.nic	chr8	-	2943	2	ISM	ENSG00000283674.3	ENST00000637678.1	1770	6	-119	62273	-45	-30851	5prime_fragment	FALSE	canonical	3	37	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAGTATGGTGGTGTGTG	-12664973	False	NA	NA	False	AAAACA	-34	NA	12665633	12657242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_12659830_12665277
transcript_186798.nic	chr8	-	3593	12	NIC	ENSG00000154359.13	novel	3618	12	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	137	junction_7	38.9831495702082	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTCTTAAATTGTAGGT	-12755518	False	NA	-9	True	AATAAA	-17	NA	12755534	12721905	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_12723255_12725726_12725880_12728900_12729064_12729173_12729333_12731735_12731858_12735285_12735401_12736700_12736765_12736899_12737141_12737994_12738145_12740873_12740997_12743163_12743283_12754699
transcript_186799.known	chr8	-	3618	12	FSM	ENSG00000154359.13	ENST00000398246.8	3618	12	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_7	44.9188432546837	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTCTTAAATTGTAGGT	-12754388	True	NA	-9	True	AATAAA	-17	NA	12755526	12721905	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_12723255_12725726_12725880_12728900_12729064_12729173_12729333_12731735_12731858_12735285_12735401_12736700_12736798_12736899_12737141_12737994_12738145_12740873_12740997_12743163_12743283_12754699
transcript_186805.known	chr8	-	4392	14	FSM	ENSG00000164741.15	ENST00000358919.6	4392	14	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_10	3.05956643097713	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATTTATGGGTATTTTT	NA	False	NA	NA	False	NA	NA	NA	13133474	13085188	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_13085932_13086289_13086464_13088486_13088705_13090251_13090471_13091317_13091433_13092611_13092826_13094758_13094958_13095085_13095246_13098398_13098576_13099346_13100771_13102789_13102854_13110741_13110824_13115585_13115658_13132943
transcript_186808.known	chr8	-	3758	14	FSM	ENSG00000164741.15	ENST00000512044.6	3758	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	4.12955862506755	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTGTATTCTTATTCA	-13276528	False	NA	NA	False	NA	NA	NA	13276546	13085576	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_13085932_13086289_13086464_13088486_13088705_13090251_13090471_13091317_13091433_13092611_13092826_13094758_13094958_13095085_13095246_13098398_13098576_13099346_13100771_13102789_13102854_13110741_13110824_13115585_13115658_13276261
transcript_186811.known	chr8	+	1420	1	FSM	ENSG00000164743.5	ENST00000297324.5	1420	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGGCTCTGACTTGTGCG	13566758	True	NA	NA	False	AATAAA	-22	NA	13566868	13568288	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_13566900_13568300
transcript_186814.nic	chr8	+	1556	11	NIC	ENSG00000104723.21	novel	3697	11	NA	NA	-7	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_10	109.528489444528	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTTAACTTACTGAAAACT	15535915	True	NA	4	True	AATAAA	-19	NA	15540215	15758277	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_15540569_15623079_15623250_15650696_15650815_15659506_15659648_15662155_15662297_15673746_15673837_15730665_15730730_15743537_15743613_15748374_15748466_15757790_15757856_15758029
transcript_186816.known	chr8	+	3697	11	FSM	ENSG00000104723.21	ENST00000503731.6	3697	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	109.528489444528	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGTAGCATTTTGTGCT	15535962	True	NA	94	True	NA	NA	NA	15540262	15766638	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_15540569_15623079_15623250_15650696_15650815_15659506_15659648_15662155_15662297_15673746_15673837_15730665_15730730_15743537_15743613_15748374_15748466_15757790_15757856_15764202
transcript_186821.known	chr8	+	3683	10	FSM	ENSG00000104723.21	ENST00000382020.8	3683	10	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_9	43.0188015169021	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGCTTACTGCAGTTT	15535922	True	NA	105	True	NA	NA	NA	15540222	15766649	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_15540569_15623079_15623250_15650696_15650815_15659506_15659648_15662155_15662297_15673746_15673837_15730665_15730730_15743537_15743613_15748374_15748466_15764202
transcript_186826.known	chr8	+	1546	9	FSM	ENSG00000104723.21	ENST00000506802.5	1546	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_8	104.749403339589	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTGAAAATTAAACTTACT	15535932	True	NA	-25	True	GATAAA	-25	NA	15540232	15764613	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_15540569_15623079_15623250_15650696_15650815_15659506_15659648_15662155_15662297_15673746_15673837_15730665_15730730_15743537_15743613_15764202
transcript_186829.known	chr8	+	1452	8	FSM	ENSG00000104723.21	ENST00000510836.5	1452	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	137.092252568428	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTCAGTTTCAGTTATAA	15535978	True	NA	-9	True	ATTAAA	-3	NA	15540278	15764629	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_15540569_15623079_15623250_15650696_15650815_15659506_15659648_15662155_15662297_15673746_15673837_15743537_15743613_15764202
transcript_186834.known	chr8	+	3990	15	FSM	ENSG00000155970.12	ENST00000318063.10	3990	15	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_8	7.74464923910274	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTACTTGGCTTTTATA	17025423	True	NA	NA	False	AATAAA	-25	NA	17027237	17122642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_17027661_17064083_17064238_17069687_17069720_17077782_17077862_17081692_17081741_17085235_17085319_17086963_17087036_17090545_17090585_17098457_17098554_17104390_17104492_17105412_17105585_17114092_17114202_17116442_17116601_17118706_17118776_17120287
transcript_186835.nic	chr8	+	787	5	NIC	ENSG00000155970.12	novel	3990	15	NA	NA	0	3351	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	10.1334840997556	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTATACTAGATGCTGC	17025423	True	NA	NA	False	GATAAA	-16	NA	17027237	17085318	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_17027661_17064083_17064238_17077782_17077862_17081692_17081741_17085235
transcript_186837.known	chr8	+	5924	13	FSM	ENSG00000104219.13	ENST00000262096.13	5924	13	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_7	22.1226065874305	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGTGAAAGCTGAATACT	17154783	True	NA	10	True	AATGAA	-16	NA	17156481	17224799	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_17156854_17184788_17184816_17186330_17186426_17195503_17195625_17197581_17197652_17198380_17198414_17205654_17205776_17207959_17208093_17209931_17210059_17210387_17210481_17215236_17215350_17217171_17217247_17220255
transcript_186849.known	chr8	-	6890	7	FSM	ENSG00000198791.12	ENST00000361272.9	6890	7	0	0	0	0	multi-exon	TRUE	canonical	3	1184	junction_1	100.045684009301	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTGTATACAGACTTT	-17238342	True	NA	-33	True	AATAAA	-18	NA	17246857	17224965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_17230849_17232426_17232538_17234715_17234861_17237211_17237374_17242991_17243186_17245035_17245248_17246674
transcript_186857.known	chr8	-	1885	6	FSM	ENSG00000198791.12	ENST00000523917.5	1885	6	0	0	0	0	multi-exon	FALSE	canonical	3	1190	junction_3	102.868070848053	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTTTTGTAGCAATGT	-17238363	True	NA	0	True	ATTAAA	-17	NA	17246878	17231569	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_17232538_17234715_17234861_17237211_17237374_17242991_17243186_17245035_17245248_17246674
transcript_186869.known	chr8	-	5110	14	FSM	ENSG00000003987.14	ENST00000180173.10	5110	14	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_8	3.8829013735766	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATGTGATTATGTAGAAC	-17412488	True	NA	-20	True	AATAAA	-19	NA	17413351	17296793	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_17300225_17302153_17302281_17304378_17304520_17305756_17305958_17309276_17309327_17311510_17311637_17313291_17313402_17331149_17331283_17341362_17341498_17348952_17349082_17361116_17361275_17371036_17371200_17373117_17373241_17413268
transcript_186880.known	chr8	+	4519	12	FSM	ENSG00000155975.10	ENST00000324849.9	4519	12	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_2	30.6963265360844	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTTTGTCATTTTTTAA	17242617	True	NA	5	True	AATAAA	-22	NA	17246957	17298024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_17247370_17265906_17265982_17268257_17268373_17268855_17268957_17274732_17274959_17276396_17276468_17280027_17280156_17280238_17280298_17280374_17280444_17284472_17284617_17286346_17286428_17294986
transcript_186887.known	chr8	+	1307	11	FSM	ENSG00000155975.10	ENST00000521829.5	1307	11	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	99.6295638854251	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTTTGCAAACTGGCATT	17242782	False	NA	NA	False	NA	NA	NA	17247122	17295052	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_17247370_17268257_17268373_17268855_17268957_17274732_17274959_17276396_17276468_17280027_17280156_17280238_17280298_17280374_17280444_17284472_17284617_17286346_17286428_17294986
transcript_186889.known	chr8	+	7615	13	FSM	ENSG00000003989.18	ENST00000494857.6	7615	13	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	9.13897331943437	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGAATGCAGATGTTACC	17495748	True	NA	63	True	AATAAA	-17	NA	17497087	17570566	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_17497238_17502256_17502303_17543317_17543716_17544450_17544607_17548677_17548844_17550300_17550435_17551763_17551987_17554559_17554700_17558294_17558398_17560327_17560534_17561943_17562111_17563602_17563712_17564949
transcript_186891.known	chr8	+	2274	12	FSM	ENSG00000003989.18	ENST00000522656.5	2274	12	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	8.45698889422381	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACTCATCTGGACAGCAT	17495751	True	NA	NA	False	NA	NA	NA	17497090	17565274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_17497238_17543317_17543716_17544450_17544607_17548677_17548844_17550300_17550435_17551763_17551987_17554559_17554700_17558294_17558398_17560327_17560534_17561943_17562111_17563602_17563712_17564949
transcript_186898.known	chr8	+	1508	6	FSM	ENSG00000104213.13	ENST00000251630.11	1508	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	7.63151361133557	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGACTTAAAATACATCCA	17576597	True	NA	NA	False	AATAAA	-28	NA	17577215	17643144	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_17577308_17589467_17589766_17621050_17621203_17628486_17628781_17634073_17634214_17642612
transcript_1869.known	chr1	+	3981	18	FSM	ENSG00000158286.13	ENST00000377939.5	3981	18	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	6.13515594001526	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTAGAATAATTACTCCGT	6206068	True	NA	NA	False	AATAAA	-18	NA	6206118	6221299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_6206303_6206535_6206727_6207378_6207512_6208880_6209026_6209114_6209197_6209267_6209344_6209413_6209540_6209923_6209971_6210222_6210296_6210369_6210439_6210869_6210939_6211020_6211119_6211866_6212054_6212230_6212417_6212681_6212734_6213065_6213184_6218288_6218370_6219235
transcript_18690.nnic	chr1	+	3840	6	NNC	ENSG00000133069.17	novel	3968	5	NA	NA	-29	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	29.0654433993359	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGTCTGGTGTTGGTTG	205227060	True	NA	7	True	AATAAA	-22	NA	205227916	205273342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_205227998_205228153_205228772_205241504_205242045_205268949_205269885_205271119_205271256_205271812
transcript_186902.known	chr8	+	6820	39	FSM	ENSG00000078674.19	ENST00000325083.13	8652	39	-148	1980	-128	-7	multi-exon	TRUE	canonical	3	107	junction_6	78.0897496651775	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTATCTTTTTTGGAAA	17921897	False	NA	NA	False	AATAAA	-16	NA	17922839	18027968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17947185_17947364_17950614_17950725_17952969_17953187_17955469_17955654_17956603_17956778_17957263_17957422_17957539_17957776_17960013_17960166_17960314_17960445_17962033_17962175_17963100_17963292_17964567_17964769_17965998_17966219_17966327_17966474_17966979_17967171_17969576_17969749_17972328_17972688_17980590_17980756_17985446_17985620_17985958_17986088_17989858_17989980_17991541_17991701_17993482_17993620_18006262_18006398_18009546_18009745_18010608_18010669_18011236_18011367_18011666_18011828_18013963_18014037_18014583_18014841_18025360_18025454_18025543_18025659_18027636
transcript_18691.known	chr1	-	3391	7	FSM	ENSG00000163545.11	ENST00000367157.6	3391	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	5.66911711723165	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGCCCTGCTGTTCTCTT	-205320043	True	NA	-6	True	ATTAAA	-20	NA	205321745	205302062	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_205304514_205305198_205305332_205306187_205306308_205308164_205308231_205308580_205308733_205311704_205311826_205321397
transcript_186914.nic	chr8	+	2680	16	NIC	ENSG00000078674.19	novel	2536	15	NA	NA	-7	284	combination_of_known_junctions	FALSE	canonical	3	61	junction_7	56.4440332443465	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATTGACATTCAGGAGAA	17914769	True	NA	NA	False	AAGAAA	-9	NA	17922980	17960387	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17940041_17940159_17947185_17947364_17950614_17950725_17952969_17953187_17955469_17955654_17956603_17956778_17957263_17957422_17957539_17957776_17960013_17960166_17960314
transcript_186916.known	chr8	+	2536	15	FSM	ENSG00000078674.19	ENST00000517730.5	2536	15	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_7	58.4142927016731	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAACACTAGAGGAAATGC	17914778	True	NA	NA	False	NA	NA	NA	17922989	17960103	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17940041_17940159_17947185_17947364_17950614_17950725_17952969_17953187_17955469_17955654_17956603_17956778_17957263_17957422_17957539_17957776_17960013
transcript_186917.nic	chr8	+	2816	15	ISM	ENSG00000078674.19	ENST00000519253.5	6443	39	-300	67416	-240	284	5prime_fragment	FALSE	canonical	3	107	junction_6	38.9945051074049	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATTGACATTCAGGAGAA	NA	False	NA	NA	False	AAGAAA	-9	NA	17922727	17960387	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17947185_17947364_17950614_17950725_17952969_17953187_17955469_17955654_17956603_17956778_17957263_17957422_17957539_17957776_17960013_17960166_17960314
transcript_186921.nic	chr8	+	2681	14	ISM	ENSG00000078674.19	ENST00000519253.5	6443	39	-300	67700	-240	0	5prime_fragment	FALSE	canonical	3	107	junction_6	40.2036237290464	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAACACTAGAGGAAATGC	NA	False	NA	NA	False	NA	NA	NA	17922727	17960103	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17947185_17947364_17950614_17950725_17952969_17953187_17955469_17955654_17956603_17956778_17957263_17957422_17957539_17957776_17960013
transcript_186932.nic	chr8	+	1776	9	ISM	ENSG00000078674.19	ENST00000519253.5	6443	39	-300	74680	-240	0	5prime_fragment	FALSE	canonical	3	107	junction_6	37.4797862187073	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGACAAATTGCTTGGA	NA	False	NA	NA	False	AAGAAA	-5	NA	17922727	17953123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17947185_17947364_17950614_17950725_17952969
transcript_186938.nic	chr8	+	703	4	ISM	ENSG00000078674.19	ENST00000518537.5	2171	11	-271	18766	-240	-132	5prime_fragment	FALSE	canonical	3	166	junction_2	19.6129209111409	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGGTGTAGAAAGTGATA	NA	False	NA	NA	False	AATAGA	-24	NA	17922727	17937189	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133
transcript_186939.nic	chr8	+	647	3	ISM	ENSG00000078674.19	ENST00000518537.5	2171	11	-271	20249	-240	-1615	5prime_fragment	FALSE	canonical	3	166	junction_2	17.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGATTCCTTACTCTTCA	NA	False	NA	NA	False	NA	NA	NA	17922727	17935706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_17923189_17924712_17924781_17935588
transcript_18694.known	chr1	-	3177	9	FSM	ENSG00000162873.15	ENST00000367156.7	3177	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	4.35889894354067	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTCTGGAGGAGTCAGGT	NA	False	NA	NA	False	AATAAA	-26	NA	205357038	205336091	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_205337593_205338494_205338597_205339193_205339410_205339643_205339809_205343228_205343794_205344133_205344459_205348375_205348591_205356532_205356570_205356987
transcript_186941.known	chr8	-	1960	14	FSM	ENSG00000104763.20	ENST00000635944.1	1960	14	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_13	292.232662435401	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCTAAGGAAGTTGCTAAC	-18076416	True	NA	NA	False	NA	NA	NA	18084067	18056834	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083916
transcript_186942.known	chr8	-	3151	14	FSM	ENSG00000104763.20	ENST00000637244.1	3151	14	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_4	281.402699507202	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTGTTCCTGACACTCA	-18084832	True	NA	-77	True	NA	NA	NA	18084980	18056492	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083980
transcript_186943.known	chr8	-	2512	14	FSM	ENSG00000104763.20	ENST00000381733.9	2512	14	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_13	291.475779744244	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGCCAGTCAGCAGTCAT	-18084850	False	NA	-39	True	AATAAA	-14	NA	18084998	18056454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18084675
transcript_186944.known	chr8	-	1975	13	FSM	ENSG00000104763.20	ENST00000636494.1	1975	13	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_11	254.355394412359	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATAAGTAGCATTCATGTA	-18076475	True	NA	NA	False	TTTAAA	-4	NA	18084126	18056723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18069791_18069879_18075540_18075588_18083980
transcript_186948.known	chr8	-	2158	12	FSM	ENSG00000104763.20	ENST00000636701.1	2158	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	208.29972841918	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTCACTGGAAAGAGTG	-18076491	True	NA	-54	True	NA	NA	NA	18084142	18056469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18075540_18075588_18083980
transcript_18695.known	chr1	-	2970	6	FSM	ENSG00000162873.15	ENST00000367155.8	2970	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	4.27083130081252	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGATAGTGTAATTCTTTC	-205356910	False	NA	NA	False	NA	NA	NA	205356922	205336060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_205337593_205338494_205338597_205339193_205339410_205339643_205339809_205343228_205343794_205356532
transcript_186950.known	chr8	-	918	5	FSM	ENSG00000104763.20	ENST00000518087.7	918	5	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_4	426.728470458675	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGGGTGTCTGGGTAC	-18076422	True	NA	-3	True	AATAAA	-24	NA	18084073	18066762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083916
transcript_186951.known	chr8	-	929	5	FSM	ENSG00000104763.20	ENST00000637561.1	929	5	0	0	0	0	multi-exon	FALSE	canonical	3	957	junction_4	29.5338788512447	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGGGTGTCTGGGTAC	-18076497	True	NA	-3	True	AATAAA	-24	NA	18084148	18066762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083980
transcript_186952.known	chr8	-	1056	5	FSM	ENSG00000104763.20	ENST00000636537.1	1056	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	424.135223130548	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGGGGTGTCTGGGTA	-18084823	True	NA	-4	True	AATAAA	-23	NA	18084971	18066763	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18084675
transcript_186955.known	chr8	+	451	4	FSM	ENSG00000245281.8	ENST00000505114.6	451	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	2.05480466765633	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACTTTGTAAAATAAATGC	18084833	True	NA	NA	False	AATAAA	-21	NA	18084867	18088211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_18084940_18086882_18086937_18087024_18087138_18087999
transcript_186956.known	chr8	-	1634	4	FSM	ENSG00000104763.20	ENST00000637202.1	1634	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	450.920786342297	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACACACACACAATGTGTA	-18076426	True	NA	NA	False	TATAAA	-37	NA	18084077	18065895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_18067299_18069791_18069879_18075540_18075588_18083980
transcript_186957.known	chr8	-	2328	14	FSM	ENSG00000104763.20	ENST00000636160.1	2328	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	282.766510407941	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAATAAACAGTCACTGGA	-18076469	True	NA	-61	True	NA	NA	NA	18084120	18056476	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18069791_18069879_18071299_18071412_18075540_18075588_18083980
transcript_186958.known	chr8	-	780	5	FSM	ENSG00000104763.20	ENST00000637805.1	780	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	429.321776177263	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGAACTGTCCTGTGTGA	-18084669	False	NA	-19	True	TATAAA	-13	NA	18084817	18066889	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18084671
transcript_186959.known	chr8	-	2245	13	FSM	ENSG00000104763.20	ENST00000520781.6	2245	13	0	0	0	0	multi-exon	FALSE	canonical	1	30	junction_8	321.486607635355	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAGTCAGCAGTCATGCA	-18076457	True	NA	-36	True	AATAAA	-17	NA	18084108	18056451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18067219_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083980
transcript_186962.known	chr8	+	2162	4	FSM	ENSG00000171428.15	ENST00000518029.5	2162	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	9.20144916122817	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGTCATCTGCCTGCTT	18209737	True	NA	NA	False	AATAAA	-31	NA	18210129	18223689	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_18210181_18212390_18212775_18219410_18219490_18222041
transcript_186964.known	chr8	+	1799	3	FSM	ENSG00000171428.15	ENST00000307719.9	1799	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	3.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGTCATCTGCCTGCTT	18209716	True	NA	NA	False	AATAAA	-31	NA	18210108	18223689	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_18210181_18219410_18219490_18222041
transcript_186967.known	chr8	-	11704	16	FSM	ENSG00000156011.18	ENST00000327040.13	11704	16	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_7	3.36386021641143	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGGGAATGTTTTTATT	-19011483	True	NA	-2	True	AATAAA	-19	NA	19013703	18527302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_18535959_18556208_18556353_18572527_18572673_18575127_18575286_18600363_18600435_18632612_18632807_18655641_18655686_18765448_18765539_18799294_18799354_18801269_18801383_18804521_18804603_18804703_18804899_18867673_18868070_18871625_18872734_18936033_18936143_19013562
transcript_186977.known	chr8	+	1984	10	FSM	ENSG00000104611.12	ENST00000519207.5	1984	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	12.6227308191743	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGGTGTACTTGAAAACG	19312856	True	NA	NA	False	AATAAA	-31	NA	19313975	19394953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_19314080_19319343_19319729_19332954_19333115_19334685_19334858_19357202_19357284_19361202_19361315_19364071_19364283_19373529_19373661_19393317_19393542_19394549
transcript_18698.nic	chr1	-	2861	5	ISM	ENSG00000162873.15	ENST00000367155.8	2970	6	12817	31	77	0	3prime_fragment	FALSE	canonical	1	4	junction_3	3.03108891324554	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTCTGGAGGAGTCAGGT	-205344092	False	NA	NA	False	AATAAA	-26	NA	205344105	205336091	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_205337593_205338494_205338597_205339193_205339410_205339643_205339809_205343228
transcript_18699.nic	chr1	-	2434	5	ISM	ENSG00000162873.15	ENST00000367155.8	2970	6	12817	458	77	-427	3prime_fragment	FALSE	canonical	1	4	junction_3	3.03108891324554	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTCTAGCACCCTGGTG	-205344092	False	NA	NA	False	ATTAAA	-14	NA	205344105	205336518	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_205337593_205338494_205338597_205339193_205339410_205339643_205339809_205343228
transcript_186998.nic	chr8	+	2721	17	NIC	ENSG00000104613.12	novel	2517	17	NA	NA	-242	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_7	71.2830789440944	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTTAAAAATTTAATTCT	NA	False	NA	18	True	AATAAA	-20	NA	19817148	19852067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_19817667_19818274_19818343_19819572_19819677_19820378_19820519_19822438_19822521_19823300_19823442_19823872_19823982_19824802_19824973_19826425_19826560_19830405_19830560_19832027_19832111_19833168_19833322_19837051_19837161_19842847_19842928_19844075_19844239_19845703_19845798_19851648
transcript_187001.known	chr8	+	2517	17	FSM	ENSG00000104613.12	ENST00000397977.8	2517	17	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_15	26.5717630907322	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTTAAAAATTTAATTCT	19813911	True	NA	18	True	AATAAA	-20	NA	19817415	19852067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_19817667_19818274_19818343_19819572_19819677_19820378_19820519_19822438_19822521_19823300_19823442_19823872_19824045_19824802_19824973_19826425_19826560_19830405_19830560_19832027_19832111_19833168_19833322_19837051_19837161_19842847_19842928_19844075_19844239_19845703_19845798_19851648
transcript_187023.nic	chr8	+	2270	15	ISM	ENSG00000104613.12	ENST00000397977.8	2517	17	-267	7830	-242	0	5prime_fragment	FALSE	canonical	3	229	junction_7	21.9694825443228	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATCCTTTTTTCTTGTTT	NA	False	NA	44	True	NA	NA	NA	19817148	19844237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_19817667_19818274_19818343_19819572_19819677_19820378_19820519_19822438_19822521_19823300_19823442_19823872_19824045_19824802_19824973_19826425_19826560_19830405_19830560_19832027_19832111_19833168_19833322_19837051_19837161_19842847_19842928_19844075
transcript_187034.nic	chr8	+	979	7	ISM	ENSG00000104613.12	ENST00000397977.8	2517	17	0	28002	0	-427	5prime_fragment	FALSE	canonical	3	269	junction_6	18.033918659632	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTGCCTATTGATTCTTT	19813911	True	NA	12	True	AATAAA	-14	NA	19817415	19824065	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_19817667_19818274_19818343_19819572_19819677_19820378_19820519_19822438_19822521_19823300_19823442_19823872
transcript_187039.known	chr8	+	3565	10	FSM	ENSG00000175445.17	ENST00000650287.1	3565	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	4.76095228569523	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTCATTATTTTGTATC	19938176	True	NA	11	True	AATAAA	-24	NA	19939252	19967259	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_19939529_19948179_19948341_19951768_19951949_19953309_19953422_19954119_19954354_19955840_19956084_19959259_19959381_19960900_19961084_19962114_19962220_19965309
transcript_187046.known	chr8	+	2856	14	FSM	ENSG00000147416.11	ENST00000276390.7	2856	14	0	0	0	0	multi-exon	FALSE	canonical	3	1022	junction_8	81.6657931765065	294	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAAGTGACTCTCTATCTT	20188307	True	NA	20	True	AATAAA	-23	NA	20197380	20221696	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_20197543_20204483_20204540_20209432_20209532_20210345_20210440_20210568_20210647_20211176_20211317_20211651_20211754_20212101_20212200_20212781_20212906_20214817_20214969_20216412_20216496_20217219_20217325_20218152_20218283_20220262
transcript_187053.known	chr8	-	5706	4	FSM	ENSG00000061337.15	ENST00000381569.5	5706	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0.942809041582063	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCACGTGTATCTGCCCT	-20303535	True	NA	-1	True	AATAAA	-25	NA	20303963	20246164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_20250364_20252781_20253586_20254836_20255316_20303739
transcript_187058.known	chr8	+	4870	28	FSM	ENSG00000130227.17	ENST00000252512.14	4870	28	0	0	0	0	multi-exon	FALSE	canonical	2	207	junction_16	40.9054917982813	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCTTCAGCAATCATGT	21916935	True	NA	24	True	AATAAA	-20	NA	21919661	22006585	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_21919789_21966856_21967004_21969482_21969577_21970143_21970311_21971875_21971942_21974669_21974775_21976355_21976522_21977769_21977844_21980083_21980204_21981730_21981878_21982639_21982813_21984645_21984840_21985585_21985692_21987140_21987277_21987783_21987858_21989002_21989084_21990343_21990408_21990810_21990920_21991867_21991975_21994362_21994452_21995491_21995600_21998754_21998838_21999090_21999306_21999535_21999675_22002111_22002273_22003218_22003318_22003902_22004031_22004994
transcript_187077.nnic	chr8	+	2061	6	NNC	ENSG00000130227.17	novel	4870	28	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	107.861021689951	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCTTCAGCAATCATGT	21916927	True	NA	24	True	AATAAA	-20	NA	21919653	22006585	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_21919721_21999659_21999675_22002111_22002273_22003218_22003318_22003902_22004031_22004994
transcript_187078.known	chr8	+	1320	5	FSM	ENSG00000158815.11	ENST00000359441.4	1320	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.22474487139159	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTATCTGAAGCGGGGC	22042763	False	NA	5	True	AATAAA	-17	NA	22042819	22048809	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22042964_22043144_22043182_22046113_22046292_22046526_22046634_22047955
transcript_187079.known	chr8	+	1706	5	FSM	ENSG00000158815.11	ENST00000518533.5	1706	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.22474487139159	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGGTTATCTGAAGCGG	22042341	True	NA	2	True	AATAAA	-14	NA	22042397	22048806	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22042964_22043144_22043182_22046146_22046292_22046526_22046634_22047955
transcript_187080.nic	chr8	+	2719	15	ISM	ENSG00000158856.19	ENST00000523266.5	2735	16	7230	-6	-62	0	3prime_fragment	FALSE	canonical	0	0	junction_11	5.99702307101496	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGTCTTTTCCTTATG	NA	False	NA	6	True	ATTAAA	-19	NA	22066435	22082524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_22066894_22067084_22067160_22067526_22067683_22069015_22069061_22069418_22069519_22069880_22069938_22070181_22070335_22072325_22072451_22073729_22073836_22080179_22080245_22080411_22080461_22080617_22080626_22080804_22080871_22081112_22081194_22081349
transcript_187081.nic	chr8	+	2588	14	ISM	ENSG00000158856.19	ENST00000415253.5	2394	15	7153	-6	3	0	3prime_fragment	FALSE	canonical	0	0	junction_11	5.93555129964936	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGTCTTTTCCTTATG	22066433	True	NA	6	True	ATTAAA	-19	NA	22066500	22082524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_22066894_22067084_22067160_22067526_22067683_22069015_22069061_22069418_22069519_22069880_22069938_22070181_22070335_22072325_22072451_22073729_22073836_22080179_22080245_22080411_22080461_22080617_22080626_22081112_22081194_22081349
transcript_187083.nic	chr8	+	2269	13	ISM	ENSG00000158856.19	ENST00000415253.5	2394	15	7663	-6	495	0	3prime_fragment	FALSE	canonical	0	0	junction_10	6.14862224856557	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGTCTTTTCCTTATG	22066936	True	NA	6	True	ATTAAA	-19	NA	22067010	22082524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_22067160_22067526_22067683_22069015_22069061_22069418_22069519_22069880_22069938_22070181_22070335_22072325_22072451_22073729_22073836_22080179_22080245_22080411_22080461_22080617_22080626_22081112_22081194_22081349
transcript_187089.known	chr8	+	2846	18	FSM	ENSG00000158863.22	ENST00000450006.7	2846	18	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_17	28.8815742077838	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTGGCTCTGTTCTTGGCC	22087825	True	NA	15	True	AATAAA	-20	NA	22089207	22104382	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22089299_22094439_22094519_22096336_22096510_22097515_22097621_22097716_22097840_22098067_22098311_22098422_22098620_22098947_22099057_22099283_22099361_22099703_22099894_22100593_22100740_22100843_22100973_22101439_22101531_22101707_22101852_22102174_22102316_22102527_22102629_22102792_22103186_22104068
transcript_187095.known	chr8	+	4316	17	FSM	ENSG00000158863.22	ENST00000289921.8	4316	17	0	0	0	0	multi-exon	TRUE	canonical	3	48	junction_1	18.2820779727032	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGTGTGGAGGGGTGGG	22087767	True	NA	NA	False	AATAAA	-14	NA	22089149	22104911	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22089299_22094439_22094519_22096336_22096510_22097515_22097621_22097716_22097840_22098067_22098311_22098422_22098620_22098947_22099057_22099283_22099361_22099703_22099894_22100593_22100740_22100843_22100973_22101439_22101531_22101707_22101852_22102174_22102316_22102527_22102629_22102792
transcript_18710.known	chr1	+	2986	16	FSM	ENSG00000117266.16	ENST00000429964.7	2986	16	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_3	21.9048447203403	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCGAGCAGTCTCGTACA	205502026	True	NA	16	True	AATATA	-20	NA	205504668	205532790	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_205504797_205523146_205523298_205523482_205523626_205524231_205524358_205525138_205525196_205526064_205526180_205526366_205526462_205526774_205526838_205527793_205527918_205528047_205528169_205528998_205529097_205529323_205529430_205529520_205529564_205530258_205530350_205530627_205530706_205531343
transcript_187115.known	chr8	-	1513	3	FSM	ENSG00000275074.2	ENST00000611621.2	1513	3	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_1	3	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCCTCCCTGCCTACAC	-22109016	True	NA	-14	True	AGTAAA	-14	NA	22109419	22106877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_22107896_22108132_22108347_22109138
transcript_187116.known	chr8	-	1754	2	FSM	ENSG00000275074.2	ENST00000613958.1	1754	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCCTGCCTACACGTCT	-22109016	True	NA	-10	True	AGTAAA	-18	NA	22109419	22106873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_22108347_22109138
transcript_187119.known	chr8	-	1666	8	FSM	ENSG00000168476.12	ENST00000306306.8	1666	8	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_6	14.5447935842405	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTCTCCTGATTCTTA	-22135994	True	NA	-19	True	AATAAA	-14	NA	22141907	22138019	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_22138553_22138638_22138794_22138925_22139062_22139415_22139530_22139962_22140084_22140171_22140249_22140624_22140698_22141450
transcript_18712.known	chr1	+	2143	16	FSM	ENSG00000117266.16	ENST00000506784.5	2143	16	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	32.7972898609355	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTAGTCCCCCTTTCTG	NA	False	NA	NA	False	NA	NA	NA	205504597	205531786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_205504797_205523146_205523298_205523482_205523716_205524231_205524358_205525138_205525196_205526064_205526180_205526366_205526462_205526774_205526838_205527793_205527918_205528047_205528169_205528998_205529097_205529323_205529430_205529520_205529564_205530258_205530350_205530627_205530706_205531343
transcript_187120.nic	chr8	-	2064	7	NIC	ENSG00000168476.12	novel	1666	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	360	junction_5	14.6021307425397	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTCTCCTGATTCTTA	-22136038	True	NA	-19	True	AATAAA	-14	NA	22141951	22138019	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_22138553_22138638_22138794_22138925_22139530_22139962_22140084_22140171_22140249_22140624_22140698_22141450
transcript_187126.known	chr8	+	3244	20	FSM	ENSG00000168487.20	ENST00000520982.5	3244	20	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	8.91821877051585	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGGCATAAGCCACTTCC	22164922	False	NA	NA	False	NA	NA	NA	22165323	22211892	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22165554_22173601_22173716_22176142_22176314_22176532_22176651_22176923_22177140_22177851_22177958_22179704_22179830_22180367_22180484_22192048_22192152_22194057_22194175_22194444_22194591_22194723_22194920_22195461_22195588_22196679_22196841_22197239_22197421_22201802_22201929_22206853_22206982_22207302_22207517_22209444_22209696_22211593
transcript_187128.known	chr8	+	3593	20	FSM	ENSG00000168487.20	ENST00000306385.10	3593	20	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_16	7.9143615733408	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCTGTGCCAGATGCTGT	22165353	True	NA	9	True	AATAAA	-20	NA	22165371	22212326	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22165554_22173601_22173716_22176142_22176314_22176532_22176651_22176960_22177140_22177851_22177958_22179704_22179830_22180367_22180484_22192048_22192152_22194057_22194175_22194444_22194591_22194723_22194920_22195461_22195588_22196679_22196841_22197239_22197421_22201802_22201929_22206853_22206982_22207302_22207517_22209444_22209696_22211593
transcript_187132.nnic	chr8	+	3173	17	NNC	ENSG00000168487.20	novel	2320	17	NA	NA	-69	0	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_15	10.8539667288047	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCTTGTCCATGTGTCT	22165056	False	NA	2	True	AGTAAA	-36	NA	22165070	22201482	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_22165554_22173601_22173716_22176142_22176314_22176532_22176651_22176960_22177140_22177851_22177958_22179704_22179830_22180367_22180484_22192048_22192152_22194057_22194175_22194444_22194591_22194723_22194920_22195461_22195588_22196679_22196841_22197239_22197421_22199021_22199388_22201117
transcript_187134.known	chr8	+	2506	16	FSM	ENSG00000168487.20	ENST00000306349.13	2506	16	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_15	10.4783374423405	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCTTGTCCATGTGTCT	22165353	True	NA	2	True	AGTAAA	-36	NA	22165371	22201482	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22165554_22173601_22173716_22176142_22176314_22176532_22176651_22176960_22177140_22177851_22177958_22179704_22179830_22180367_22180484_22192048_22192152_22194057_22194175_22194444_22194591_22194723_22194920_22195461_22195588_22196679_22196841_22197239_22197421_22201117
transcript_187136.known	chr8	-	3099	6	FSM	ENSG00000168490.14	ENST00000321613.7	3099	6	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_4	6.24819974072532	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGAGCTGCTGTAACAAA	-22231515	True	NA	0	True	AATAAA	-36	NA	22232101	22219703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_22221888_22224225_22224344_22226850_22227026_22228192_22228387_22228787_22228910_22231795
transcript_187137.known	chr8	-	2976	5	FSM	ENSG00000168490.14	ENST00000454243.7	2976	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	3	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAGCTGCTGTAACAAAA	-22231513	True	NA	1	True	AATAAA	-37	NA	22232099	22219702	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_22221888_22224225_22224344_22226850_22227026_22228192_22228387_22231795
transcript_187139.known	chr8	+	5336	9	FSM	ENSG00000168495.13	ENST00000306433.9	5336	9	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	71.9804661001858	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCCCTGCGTGGTCCGA	22243683	True	NA	10	True	ATTAAA	-22	NA	22245132	22254601	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22245184_22245444_22245615_22247220_22247265_22247856_22248009_22248153_22248279_22248480_22248650_22249043_22249310_22250074_22250228_22250395
transcript_187140.known	chr8	+	5494	8	FSM	ENSG00000168495.13	ENST00000397802.8	5494	8	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_4	14.030578849682	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGCCCTGCGTGGTCCG	22243785	False	NA	9	True	ATTAAA	-21	NA	22245234	22254600	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22245615_22247220_22247265_22247856_22248009_22248153_22248279_22248480_22248650_22249043_22249310_22250074_22250228_22250395
transcript_187145.nic	chr8	+	500	4	ISM	ENSG00000168495.13	ENST00000519237.5	683	6	210	399	-56	-399	internal_fragment	FALSE	canonical	3	286	junction_2	3.55902608401044	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAGAGAGAGACAGACGA	22240172	True	NA	NA	False	NA	NA	NA	22245375	22248218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_22245615_22247220_22247265_22247856_22248009_22248153
transcript_187146.nic	chr8	+	446	3	ISM	ENSG00000168495.13	ENST00000519237.5	683	6	184	624	-82	-624	internal_fragment	FALSE	canonical	3	286	junction_2	4	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGATGAAGAAAAAAGGTATA	22243900	False	NA	6	True	NA	NA	NA	22245349	22247993	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_22245615_22247220_22247265_22247856
transcript_187148.known	chr8	+	5114	23	FSM	ENSG00000197181.12	ENST00000356766.11	5114	23	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_22	9.45104830426693	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAGTTGTGTTTGAAAT	22274775	True	NA	NA	False	AATAAA	-17	NA	22275315	22357568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22275399_22279340_22279585_22281119_22281208_22281376_22281516_22283033_22283241_22284161_22284273_22287527_22287646_22288541_22288667_22289846_22289928_22290232_22290347_22304020_22304210_22304783_22304869_22305926_22306017_22307932_22308074_22309960_22310075_22311111_22311301_22314327_22314430_22315028_22315146_22316244_22316334_22318169_22318276_22352958_22353213_22354270_22354379_22355348
transcript_187152.nnic	chr8	+	2697	21	NNC	ENSG00000197181.12	novel	5114	23	NA	NA	0	-33506	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_20	7.29657453878188	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGTTTTGGTTTTTTTTT	22274775	True	NA	4	True	AATAAA	-12	NA	22275315	22322010	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_22275399_22279340_22279585_22281119_22281208_22281376_22281516_22283033_22283241_22284161_22284273_22287527_22287646_22288541_22288667_22289846_22289928_22290232_22290347_22304020_22304210_22304783_22304869_22305926_22306017_22307932_22308074_22309960_22310075_22311111_22311301_22314327_22314430_22315028_22315146_22316244_22316334_22318169_22318276_22321845
transcript_187153.known	chr8	+	3488	22	FSM	ENSG00000197181.12	ENST00000521356.5	3488	22	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_21	10.3347596119033	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGCC	22274796	True	NA	NA	False	NA	NA	NA	22275336	22356071	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22275399_22279340_22279585_22281119_22281208_22281376_22281516_22283033_22283241_22284161_22284273_22287527_22287646_22288541_22288667_22289846_22289928_22290232_22290347_22304020_22304210_22304783_22304869_22305926_22306017_22307932_22308074_22309960_22310075_22311111_22311301_22314327_22314430_22315028_22315146_22316244_22316334_22318169_22318276_22352958_22353213_22355348
transcript_187163.known	chr8	+	4663	9	FSM	ENSG00000104635.15	ENST00000359741.10	4663	9	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	654.223955824762	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGGTGGCGATGGTGTC	22351865	True	NA	20	True	AATAAA	-26	NA	22367277	22422736	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22367409_22404695_22404981_22408309_22408497_22409945_22410116_22414779_22414903_22415768_22415958_22416072_22416281_22417650_22417836_22419551
transcript_187166.known	chr8	+	4663	9	FSM	ENSG00000104635.15	ENST00000381237.6	4663	9	0	0	0	0	multi-exon	FALSE	canonical	3	1384	junction_5	118.754934108019	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGGTGGCGATGGTGTC	22351865	True	NA	20	True	AATAAA	-26	NA	22367277	22422736	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22367409_22404695_22404981_22408309_22408497_22412036_22412207_22414779_22414903_22415768_22415958_22416072_22416281_22417650_22417836_22419551
transcript_18717.known	chr1	+	3141	16	FSM	ENSG00000117266.16	ENST00000360066.6	3141	16	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	28.7754525015101	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGAGCAGTCTCGTACAGAA	NA	False	NA	19	True	AATATA	-23	NA	205504598	205532793	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_205504879_205523146_205523298_205523482_205523626_205524231_205524358_205525138_205525196_205526064_205526180_205526366_205526462_205526774_205526838_205527793_205527918_205528047_205528169_205528998_205529097_205529323_205529430_205529520_205529564_205530258_205530350_205530627_205530706_205531343
transcript_187173.known	chr8	+	2137	9	FSM	ENSG00000104635.15	ENST00000289952.9	2137	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	508.608011512796	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTCCAGCTGGCCAATAG	22367408	True	NA	NA	False	NA	NA	NA	22367536	22420140	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22367738_22404695_22404981_22408309_22408497_22412036_22412207_22414779_22414903_22415768_22415958_22416072_22416281_22417650_22417836_22419551
transcript_18718.nic	chr1	+	3244	16	NIC	ENSG00000117266.16	novel	3141	16	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_3	37.4494622420966	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCGAGCAGTCTCGTACA	NA	False	NA	16	True	AATATA	-20	NA	205504582	205532790	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_205504879_205523146_205523298_205523482_205523716_205524231_205524358_205525138_205525196_205526064_205526180_205526366_205526462_205526774_205526838_205527793_205527918_205528047_205528169_205528998_205529097_205529323_205529430_205529520_205529564_205530258_205530350_205530627_205530706_205531343
transcript_187196.nnic	chr8	+	2352	15	NNC	ENSG00000120910.15	novel	2194	14	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	12.0712172424443	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGTTTCTGACTTGAAC	22441023	False	NA	8	True	AATAAA	-21	NA	22441033	22541125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_22441459_22474953_22475152_22475499_22475625_22498000_22498113_22511085_22511232_22513292_22513433_22522490_22522569_22522654_22522750_22523642_22523757_22527391_22527518_22528505_22528578_22532224_22532307_22532920_22533019_22539468_22539499_22540614
transcript_187199.known	chr8	+	2194	14	FSM	ENSG00000120910.15	ENST00000240139.10	2194	14	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_12	8.70013262498381	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGTTTCTGACTTGAAC	22440702	True	NA	8	True	AATAAA	-21	NA	22441077	22541125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22441459_22474953_22475152_22475499_22475625_22498000_22498113_22511085_22511232_22513292_22513433_22522490_22522569_22522654_22522750_22527391_22527518_22528505_22528578_22532224_22532307_22532920_22533019_22539468_22539499_22540614
transcript_187203.known	chr8	+	2135	13	FSM	ENSG00000120910.15	ENST00000289963.12	2135	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_12	7.8328900583799	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAGTCAGTCTTCATTAT	22440748	True	NA	25	True	AATAAA	-38	NA	22441123	22541142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22441459_22474953_22475152_22475499_22475625_22498000_22498113_22511085_22511232_22513292_22513433_22522490_22522569_22522654_22522750_22527391_22527518_22528505_22528578_22532224_22532307_22532920_22533019_22540614
transcript_187207.known	chr8	+	3227	21	FSM	ENSG00000120896.14	ENST00000240123.12	3227	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	294.56018060831	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCAGACTGTTTTGATT	22551916	False	NA	NA	False	NA	NA	NA	22551926	22575788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22552023_22554451_22554609_22554862_22554981_22556714_22556909_22558128_22558193_22561334_22561374_22561864_22561932_22563986_22564078_22564282_22564370_22564467_22564522_22565267_22565355_22565825_22565873_22566344_22566485_22566660_22566714_22566821_22566869_22567060_22567176_22569147_22569274_22570909_22571222_22571717_22571822_22572339_22572447_22574666
transcript_187216.known	chr8	+	2028	10	FSM	ENSG00000120896.14	ENST00000523965.5	2028	10	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_1	52.2822350207547	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGTCTCTGCGGCCTTTT	22560481	True	NA	9	True	AATAAA	-16	NA	22565677	22575495	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22565873_22566344_22566485_22566660_22566714_22566821_22566869_22567060_22567176_22569147_22569274_22570909_22571222_22571717_22571822_22572339_22572447_22574666
transcript_187219.nnic	chr8	+	2135	10	NNC	ENSG00000120896.14	novel	3067	19	NA	NA	-109	0	intron_retention	FALSE	canonical	3	30	junction_1	185.452000378654	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGTCTCTGCGGCCTTTT	22560695	False	NA	9	True	AATAAA	-16	NA	22565891	22575495	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_22566194_22566344_22566485_22566660_22566714_22566821_22566869_22567060_22567176_22569147_22569274_22570909_22571222_22571717_22571822_22572339_22572447_22574666
transcript_187220.nic	chr8	+	2145	10	NIC	ENSG00000120896.14	novel	3067	19	NA	NA	-69	0	intron_retention	FALSE	canonical	3	18	junction_1	189.158369862105	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGTCTCTGCGGCCTTTT	22560735	False	NA	9	True	AATAAA	-16	NA	22565931	22575495	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_22566244_22566344_22566485_22566660_22566714_22566821_22566869_22567060_22567176_22569147_22569274_22570909_22571222_22571717_22571822_22572339_22572447_22574666
transcript_187226.nic	chr8	+	2143	9	NIC	ENSG00000120896.14	novel	2028	10	NA	NA	-7	0	intron_retention	FALSE	canonical	3	485	junction_1	55.1235827482213	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGTCTCTGCGGCCTTTT	22560474	True	NA	9	True	AATAAA	-16	NA	22565670	22575495	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_22565873_22566344_22566485_22566660_22566869_22567060_22567176_22569147_22569274_22570909_22571222_22571717_22571822_22572339_22572447_22574666
transcript_187227.nic	chr8	+	1904	9	NIC	ENSG00000120896.14	novel	2028	10	NA	NA	-16	0	intron_retention	FALSE	canonical	3	43	junction_1	191.853948356556	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGTCTCTGCGGCCTTTT	22560465	True	NA	9	True	AATAAA	-16	NA	22565661	22575495	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_22565873_22566660_22566714_22566821_22566869_22567060_22567176_22569147_22569274_22570909_22571222_22571717_22571822_22572339_22572447_22574666
transcript_187229.nic	chr8	+	2012	8	NIC	ENSG00000120896.14	novel	2028	10	NA	NA	-16	0	intron_retention	FALSE	canonical	3	43	junction_1	203.126782566747	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGTCTCTGCGGCCTTTT	22560465	True	NA	9	True	AATAAA	-16	NA	22565661	22575495	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_22565873_22566660_22566869_22567060_22567176_22569147_22569274_22570909_22571222_22571717_22571822_22572339_22572447_22574666
transcript_187233.known	chr8	+	1847	10	FSM	ENSG00000120913.24	ENST00000397760.8	1847	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	155.992481616864	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGATGTCCCTTCCTTCTT	22578743	True	NA	15	True	AATAAA	-1	NA	22579129	22594298	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22579528_22580602_22580698_22581378_22581531_22584820_22584891_22585016_22585163_22585320_22585400_22589297_22589375_22589595_22589742_22591550_22591669_22593732
transcript_187234.nic	chr8	+	1589	10	NIC	ENSG00000120913.24	novel	2236	10	NA	NA	-60	0	combination_of_known_junctions	TRUE	canonical	2	6	junction_1	157.469573780673	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGATGTCCCTTCCTTCTT	NA	False	NA	15	True	AATAAA	-1	NA	22579069	22594298	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_22579210_22580602_22580698_22581378_22581531_22584820_22584891_22585016_22585163_22585320_22585400_22589297_22589375_22589595_22589742_22591550_22591669_22593732
transcript_187235.known	chr8	+	1491	10	FSM	ENSG00000120913.24	ENST00000397761.6	1491	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	157.861714762175	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTCTATAAATATATGAATA	22578763	False	NA	-18	True	GGGGCT	-35	NA	22579149	22594265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22579225_22580602_22580698_22581378_22581531_22584820_22584891_22585016_22585163_22585320_22585400_22589297_22589375_22589595_22589742_22591550_22591669_22593732
transcript_187244.known	chr8	+	2056	7	FSM	ENSG00000241852.11	ENST00000289989.10	2056	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	33.9873342421686	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAAACCTCAGGTGAAT	22598441	True	NA	18	True	ATTAAA	-15	NA	22599598	22604142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22599761_22600881_22601358_22601711_22601853_22601971_22602081_22602199_22602313_22602536_22602644_22603194
transcript_187245.known	chr8	+	2021	7	FSM	ENSG00000241852.11	ENST00000409586.7	2021	7	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_5	34.5225369223578	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGTGCTTTGTAAACCT	22598443	True	NA	9	True	ATTAAA	-6	NA	22599600	22604133	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22599761_22600881_22601358_22601711_22601853_22601971_22602081_22602199_22602313_22602560_22602644_22603194
transcript_187249.known	chr8	+	1955	6	FSM	ENSG00000241852.11	ENST00000614574.4	1955	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_5	38.2382007944935	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCAGGTGAATAGGAAAGG	22598443	True	NA	26	True	ATTAAA	-23	NA	22599600	22604150	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22599761_22600881_22601358_22601711_22601853_22601971_22602081_22602199_22602313_22603194
transcript_187254.known	chr8	+	599	4	FSM	ENSG00000120913.24	ENST00000614502.4	599	4	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_3	73.9203775844132	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGACAATGGTGGGCAGT	22585522	True	NA	NA	False	NA	NA	NA	22589281	22593974	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22589375_22589595_22589742_22591550_22591669_22593732
transcript_187256.known	chr8	+	701	3	FSM	ENSG00000120913.24	ENST00000443561.3	701	3	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_2	169	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAGAAGTGGGAAGGAGAG	22585523	True	NA	-88	True	NA	NA	NA	22589282	22594195	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22589375_22589595_22589742_22593732
transcript_187261.known	chr8	+	4853	21	FSM	ENSG00000158941.17	ENST00000308511.9	3685	21	-125	-1043	-125	550	multi-exon	FALSE	canonical	3	780	junction_7	69.7530465284492	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGATGGGACAGGTCTC	22603474	False	NA	NA	False	NA	NA	NA	22604631	22621514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22604843_22605735_22605832_22606084_22606177_22606606_22606699_22606909_22607025_22607195_22607326_22607968_22608066_22613016_22613137_22614091_22614315_22614389_22614504_22614837_22615002_22615424_22615597_22615681_22615913_22616011_22616249_22617419_22617565_22617695_22617779_22618348_22618496_22618616_22618729_22618826_22619016_22619149_22619356_22619637
transcript_187268.known	chr8	+	3980	21	FSM	ENSG00000158941.17	ENST00000389279.7	3980	21	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	193.186406095253	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGAGTGTGTCCTCCACA	22604976	False	NA	62	True	AATAAA	-18	NA	22605037	22620471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_22605419_22605735_22605832_22606084_22606177_22606606_22606699_22606909_22607025_22607195_22607326_22607968_22608066_22613016_22613137_22614091_22614315_22614389_22614504_22614837_22615002_22615424_22615597_22615681_22615913_22616011_22616249_22617419_22617565_22617695_22617779_22618348_22618496_22618616_22618729_22618826_22619016_22619149_22619356_22619637
transcript_187307.known	chr8	-	1836	9	FSM	ENSG00000147439.14	ENST00000276416.11	1836	9	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_4	8.7740740252177	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCAACTTTATATACAAAG	-22666522	True	NA	NA	False	TTTAAA	-28	NA	22669121	22620417	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_22621569_22623914_22624050_22624221_22624364_22629963_22630005_22630441_22630579_22636524_22636587_22636921_22636963_22644754_22644804_22669043
transcript_187314.known	chr8	-	893	8	FSM	ENSG00000147439.14	ENST00000519335.5	893	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_7	54.0551494649073	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCAGGAGCCCTAGGCAG	-22666480	True	NA	NA	False	AATGAA	-19	NA	22669079	22621269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_22621569_22623914_22624050_22624221_22624364_22629963_22630005_22630441_22630579_22636524_22636587_22636921_22636963_22669043
transcript_187324.known	chr8	-	470	3	FSM	ENSG00000147439.14	ENST00000518366.1	470	3	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	2.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCTGGAAGAGCAGACCC	-22666492	True	NA	NA	False	NA	NA	NA	22669091	22636589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_22636963_22644754_22644804_22669043
transcript_187325.known	chr8	-	321	2	FSM	ENSG00000147439.14	ENST00000522268.1	321	2	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCTGTCCTGGGACACT	-22666549	True	NA	NA	False	NA	NA	NA	22669148	22644587	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_22644804_22669043
transcript_187326.known	chr8	-	2750	1	FSM	ENSG00000253200.1	ENST00000521025.1	2750	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACTGGGAAAGGGAAAAAA	-22616646	False	NA	NA	False	NA	NA	NA	22616657	22613907	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_22613900_22616700
transcript_187327.known	chr8	+	5482	10	FSM	ENSG00000008853.18	ENST00000251822.7	5482	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_6	8.40340906719513	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTTCCTTGTTTGTATT	22999190	True	NA	29	True	CATAAA	-23	NA	22999547	23020199	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_23000106_23004424_23004627_23005371_23005476_23005959_23006146_23006727_23007747_23007992_23008112_23010537_23010689_23014689_23014779_23015637_23015744_23017251
transcript_187331.known	chr8	-	1723	10	FSM	ENSG00000120889.13	ENST00000347739.3	1723	10	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_5	69.8030739710112	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCGACTTCACTTGATAC	-23061005	True	NA	2	True	NA	NA	NA	23069021	23022310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_23022985_23024187_23024261_23027132_23027289_23027721_23027754_23028330_23028442_23028528_23028603_23029609_23029722_23030758_23030873_23043137_23043244_23068750
transcript_187335.known	chr8	-	1464	9	FSM	ENSG00000120889.13	ENST00000523504.5	1464	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_8	146.859999233964	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTGATAATAAGGACACT	-23061015	True	NA	-58	True	NA	NA	NA	23069031	23022473	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_23022985_23024187_23024261_23027132_23027289_23027721_23027754_23028330_23028442_23028528_23028603_23029609_23029722_23030758_23030873_23068750
transcript_187336.known	chr8	-	3998	9	FSM	ENSG00000120889.13	ENST00000276431.9	3998	9	0	0	0	0	multi-exon	FALSE	canonical	3	380	junction_7	21.9512955198549	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGTGGTTTTTGTCTCC	-23061015	True	NA	NA	False	ATTAAA	-21	NA	23069031	23020132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_23022985_23024187_23024261_23027132_23027289_23027721_23027754_23028330_23028603_23029609_23029722_23030758_23030873_23043137_23043244_23068750
transcript_18734.known	chr1	+	1134	7	FSM	ENSG00000117266.16	ENST00000512922.5	1134	7	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_2	30.1464020333365	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGAGGCCTCGGGGGCAG	NA	False	NA	NA	False	NA	NA	NA	205504595	205526835	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_205504797_205523146_205523626_205524231_205524358_205525138_205525196_205526064_205526180_205526366_205526462_205526774
transcript_187345.known	chr8	-	1945	2	FSM	ENSG00000245025.3	ENST00000502083.2	1945	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTCTTCCTCTCTATTT	-23019325	False	16	NA	False	NA	NA	NA	23019335	23006380	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_23008118_23019127
transcript_187347.known	chr8	+	1395	5	FSM	ENSG00000173535.15	ENST00000356864.4	1395	5	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_4	11.9242400177118	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCCGTGTGTTGGTTTTT	23102650	True	NA	NA	False	NA	NA	NA	23102920	23117445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_23103182_23111719_23111826_23114656_23114771_23115507_23115617_23116640
transcript_187348.known	chr8	+	1242	4	FSM	ENSG00000284948.1	ENST00000397703.6	1242	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	1.24721912892465	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTCCTTGGAGATCGGT	23084201	True	NA	12	True	AATAAA	-27	NA	23084354	23103558	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_23084546_23090147_23090289_23100636_23100685_23102696
transcript_187349.known	chr8	+	894	4	FSM	ENSG00000173535.15	ENST00000517558.1	894	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	71.8377802181183	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCCTTCCTTACCTGAAA	23102650	True	NA	12	True	NA	NA	NA	23102920	23117050	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_23103182_23114656_23114771_23115507_23115617_23116640
transcript_187350.known	chr8	-	3535	9	FSM	ENSG00000173530.6	ENST00000312584.4	3535	9	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_3	16.1380760935125	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGGTGTTCGTTTATTT	-23161665	True	NA	NA	False	AATAAA	-22	NA	23164027	23135587	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_23138004_23138187_23138261_23144449_23144636_23145057_23145090_23145667_23145922_23146960_23147073_23148437_23148552_23154873_23154980_23163785
transcript_187353.known	chr8	-	2690	10	FSM	ENSG00000104689.10	ENST00000221132.8	2690	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	4.24264068711928	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAAAGAATTGCTTCC	-23223443	True	NA	99	True	NA	NA	NA	23225102	23190451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_23192014_23197131_23197205_23199265_23199449_23199885_23199918_23200504_23200601_23200686_23200761_23201807_23201920_23202647_23202762_23212115_23212213_23224755
transcript_18736.known	chr1	+	588	4	FSM	ENSG00000174514.13	ENST00000465651.1	588	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	1.69967317119759	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTCTCAATGGCTATTCA	205592009	True	NA	NA	False	NA	NA	NA	205592036	205600550	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_205592288_205597779_205597851_205599130_205599252_205600405
transcript_187360.known	chr8	+	1970	3	FSM	ENSG00000246582.3	ENST00000500853.1	1970	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	30	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTCCATTTGGTTCTT	23225013	True	NA	21	True	AATAAA	-34	NA	23225220	23230926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_23226124_23228065_23228154_23229947
transcript_187368.known	chr8	+	2639	10	FSM	ENSG00000147457.14	ENST00000517325.5	2639	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	96.0578529382742	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTTGTCCCGTCTCCTC	23243935	True	NA	4	True	ATTAAA	-11	NA	23246641	23261992	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_23246825_23249209_23249382_23255246_23255433_23256459_23256594_23258032_23258082_23258329_23258450_23258731_23258831_23259065_23259127_23260143_23260324_23260537
transcript_187374.known	chr8	+	1500	9	FSM	ENSG00000104679.12	ENST00000522012.6	1500	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	87.3118512860654	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGCGTCCCGACGTAGCT	NA	False	NA	NA	False	NA	NA	NA	23287907	23296121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_23288158_23288505_23288634_23289015_23289154_23289865_23290220_23290334_23290470_23291360_23291534_23293302_23293374_23294768_23294865_23295966
transcript_187378.known	chr8	+	1573	8	FSM	ENSG00000104679.12	ENST00000265806.12	1573	8	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_1	25.6316131337209	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTTGAAATGTGGTCTG	23286140	True	NA	21	True	AATAAA	-23	NA	23288107	23296279	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_23288158_23288505_23288634_23289015_23289154_23289865_23290470_23291360_23291534_23293302_23293374_23294768_23294865_23295966
transcript_187382.nic	chr8	+	2697	7	ISM	ENSG00000104679.12	ENST00000265806.12	1573	8	-25	3	-25	-3	intron_retention	FALSE	canonical	3	204	junction_1	27.2457947825593	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCACTTTGAAATGTGGT	23286115	True	NA	18	True	AATAAA	-20	NA	23288082	23296276	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_23288158_23288505_23288634_23289015_23289154_23289865_23290470_23291360_23291534_23293302_23293374_23294768
transcript_187393.nic	chr8	-	3632	15	NIC	ENSG00000134013.16	novel	3721	14	NA	NA	32	-283	combination_of_known_junctions	FALSE	canonical	2	5	junction_13	80.8425340159649	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTCTGTGTTTCCTTTGA	-23399222	True	NA	-4	True	AATAAA	-17	NA	23404194	23297179	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_23298123_23298835_23298948_23302026_23302164_23303281_23303398_23309667_23309912_23316948_23317115_23319884_23320053_23322129_23322282_23328381_23328566_23333400_23333624_23340991_23341204_23360089_23360266_23367996_23368435_23370642_23370763_23403953
transcript_187397.known	chr8	-	3721	14	FSM	ENSG00000134013.16	ENST00000389131.8	3721	14	0	0	0	0	multi-exon	TRUE	canonical	2	103	junction_11	38.4795342515085	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAAGGCATAGGAGTTGT	-23399148	True	NA	NA	False	NA	NA	NA	23404120	23296896	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_23298123_23298835_23298948_23302026_23302164_23303281_23303398_23309667_23309912_23316948_23317115_23319884_23320053_23322129_23322282_23328381_23328566_23333400_23333624_23340991_23341204_23360089_23360266_23367996_23368435_23403953
transcript_187411.known	chr8	-	5803	13	FSM	ENSG00000197217.13	ENST00000358689.9	5803	13	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_5	46.5983875495947	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCGTAGACTGTGTGGG	-23453996	True	NA	-10	True	AATAAA	-20	NA	23457647	23429161	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_23433155_23434316_23434479_23435391_23435478_23436933_23437259_23439748_23439916_23441568_23441724_23442006_23442067_23443849_23443954_23444455_23444607_23447679_23447886_23448741_23448940_23449892_23449998_23457556
transcript_187412.known	chr8	-	2063	13	FSM	ENSG00000197217.13	ENST00000417069.6	2063	13	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_5	36.4793510846281	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGCTCACAGCTCCACGA	-23454044	True	NA	NA	False	NA	NA	NA	23457695	23432925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_23433155_23434316_23434479_23435391_23435478_23436933_23437259_23439748_23439916_23441592_23441724_23442006_23442067_23443849_23443954_23444455_23444607_23447679_23447886_23448741_23448940_23449892_23449998_23457556
transcript_187428.known	chr8	-	2026	12	FSM	ENSG00000197217.13	ENST00000523958.5	2026	12	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_4	48.6660062599065	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTTTGGTTATTCTC	-23453988	True	NA	NA	False	AATACA	-20	NA	23457639	23434092	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_23434479_23435391_23435478_23436933_23437259_23439748_23439916_23441568_23441724_23442006_23442067_23443849_23443954_23444455_23444607_23447679_23447886_23448741_23448940_23449892_23449998_23457556
transcript_187437.known	chr8	+	4672	4	FSM	ENSG00000147454.14	ENST00000519973.6	4672	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	104.964544278321	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTGTGGGCTCTGTGGTG	23526343	True	NA	16	True	AATAAA	-16	NA	23528955	23575463	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_23529213_23566107_23566337_23568321_23568379_23571334
transcript_187447.known	chr8	+	1889	4	FSM	ENSG00000147454.14	ENST00000290075.10	1889	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	106.686456497533	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	23526343	True	NA	NA	False	AAGAAA	-23	NA	23528955	23572203	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_23529213_23566107_23566814_23568321_23568379_23571334
transcript_18745.nnic	chr1	-	3603	5	NNC	ENSG00000158715.6	novel	3391	5	NA	NA	8232	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	15.2540978100968	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCATGTGTTTCTTTTAG	-205671595	False	682	0	True	ATTAAA	-19	NA	205672277	205657850	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_205659672_205661860_205662127_205662832_205663619_205664484_205664887_205671949
transcript_187451.nic	chr8	+	2159	4	NIC	ENSG00000147454.14	novel	3404	3	NA	NA	-125	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	121.233475391723	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-16	NA	23528830	23572221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_23529213_23566107_23566941_23568321_23568379_23571334
transcript_187453.nic	chr8	+	2184	4	NIC	ENSG00000147454.14	novel	3404	3	NA	NA	-125	0	combination_of_known_junctions	TRUE	canonical	1	4	junction_2	119.724684171644	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-16	NA	23528830	23572221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_23529213_23566107_23566966_23568321_23568379_23571334
transcript_18746.known	chr1	-	3391	5	FSM	ENSG00000158715.6	ENST00000367145.4	3391	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	6.72216482987438	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCATGTGTTTCTTTTAG	-205679827	True	NA	0	True	ATTAAA	-19	NA	205680509	205657850	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_205659672_205661860_205662127_205662832_205663619_205664484_205664887_205680393
transcript_187460.known	chr8	+	3404	3	FSM	ENSG00000147454.14	ENST00000518881.5	3404	3	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	88.5	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	23526354	True	NA	NA	False	AGTAAA	-16	NA	23528966	23572221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_23529213_23566107_23568379_23571334
transcript_187462.known	chr8	+	3018	2	FSM	ENSG00000147454.14	ENST00000520654.1	3018	2	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAAATGCTAATTCTGGC	23529023	False	NA	NA	False	NA	NA	NA	23529052	23568965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_23529213_23566107
transcript_187464.known	chr8	+	479	2	FSM	ENSG00000147454.14	ENST00000519192.1	479	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTATTAGTGAGAGTGTAA	23526362	True	NA	NA	False	AATAAA	-16	NA	23528974	23531925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_23529213_23531684
transcript_187465.known	chr8	-	3278	2	FSM	ENSG00000167034.10	ENST00000380871.5	3278	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGTGTGTGTGATTTTC	-23682620	True	NA	-3	True	AATAAA	-21	NA	23682938	23678696	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_23681640_23682603
transcript_187467.known	chr8	-	1748	4	FSM	ENSG00000159167.12	ENST00000524323.1	1748	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	98.8612945270067	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGGGAATGGAATAACTAT	-23853917	False	NA	NA	False	NA	NA	NA	23854311	23843913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_23845041_23851319_23851532_23852241_23852385_23854045
transcript_187468.known	chr8	-	3868	4	FSM	ENSG00000159167.12	ENST00000290271.7	3868	4	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_3	10.2089285540757	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTTCCCCCCATGTCTT	-23854412	True	NA	-14	True	AATAAA	-14	NA	23854806	23841928	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_23845041_23851319_23851532_23852241_23852385_23854405
transcript_187470.known	chr8	+	3271	3	FSM	ENSG00000104722.14	ENST00000221166.10	3271	3	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	18.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAATTGCTGAGTCTTATG	24911334	True	NA	12	True	AATAAA	-19	NA	24913760	24919093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_24914874_24915604_24915730_24917060
transcript_187475.known	chr8	+	2519	3	FSM	ENSG00000104722.14	ENST00000433454.3	2519	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	76.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGAGTCTTATGTCATT	24912515	False	NA	17	True	AATAAA	-24	NA	24914941	24919098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_24915298_24915604_24915730_24917060
transcript_187478.known	chr8	-	3584	4	FSM	ENSG00000277586.4	ENST00000610854.2	3584	4	0	0	0	0	multi-exon	FALSE	canonical	3	476	junction_2	54.6158300210561	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGCTTAAAGTCTTTTTT	-24952531	True	NA	-3	True	AATAAA	-18	NA	24956612	24950954	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_24952953_24953475_24953796_24954180_24954306_24955471
transcript_187480.nic	chr8	-	1399	2	ISM	ENSG00000277586.4	ENST00000610854.2	3584	4	-243	3336	-134	934	5prime_fragment	FALSE	canonical	3	607	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGAAAATGAATTGAGGAC	NA	False	NA	-40	True	NA	NA	NA	24956855	24954290	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_24954306_24955471
transcript_187482.known	chr8	-	3367	12	FSM	ENSG00000104756.16	ENST00000221200.9	3367	12	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_11	10.816271794717	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTATTTTTATCATTC	-25457774	True	NA	-4	True	ATTAAA	-20	NA	25458433	25427846	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_25429974_25432503_25432638_25433329_25433436_25435362_25435513_25436234_25436331_25436417_25436486_25439278_25439408_25439605_25439665_25440576_25440674_25444291_25444336_25446128_25446251_25458198
transcript_187490.nnic	chr8	+	2282	15	NNC	ENSG00000184661.14	novel	922	7	NA	NA	-263	-1138	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	72.2009666959989	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATTCCAAAAGCAAAAAATA	NA	False	NA	NA	False	AATAAA	-3	NA	25458935	25506735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_25459149_25460239_25460301_25460383_25460555_25462053_25462209_25466174_25466326_25468216_25468414_25469895_25469981_25479912_25480125_25483398_25483487_25483965_25484211_25485758_25485838_25487245_25487335_25488551_25488690_25503372_25503545_25506509
transcript_187493.known	chr8	+	3486	15	FSM	ENSG00000184661.14	ENST00000330560.8	3486	15	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_13	24.2374520449789	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAGAAAACATTCTATTAA	25448857	True	NA	24	True	AATAAA	-20	NA	25459232	25507911	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_25459474_25460239_25460301_25460383_25460555_25462053_25462209_25466174_25466326_25468216_25468414_25469895_25469981_25479912_25480125_25483398_25483487_25483965_25484211_25485758_25485838_25487245_25487335_25488551_25488690_25503372_25503545_25506509
transcript_187497.nic	chr8	+	2223	14	ISM	ENSG00000184661.14	ENST00000330560.8	3486	15	-284	4512	-250	-4474	5prime_fragment	FALSE	canonical	3	222	junction_13	24.3261857595774	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAGGGAAAGAAAAGTGT	25458892	False	NA	NA	False	AAAAAG	-17	NA	25458948	25503399	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_25459474_25460239_25460301_25460383_25460555_25462053_25462209_25466174_25466326_25468216_25468414_25469895_25469981_25479912_25480125_25483398_25483487_25483965_25484211_25485758_25485838_25487245_25487335_25488551_25488690_25503372
transcript_187501.known	chr8	+	3565	14	FSM	ENSG00000184661.14	ENST00000380665.3	3565	14	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_12	25.0523711806916	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTTTATGTAGAAATAAAT	25448823	True	NA	-14	True	AATAAA	-23	NA	25459198	25507873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_25459474_25460239_25460555_25462053_25462209_25466174_25466326_25468216_25468414_25469895_25469981_25479912_25480125_25483398_25483487_25483965_25484211_25485758_25485838_25487245_25487335_25488551_25488690_25503372_25503545_25506509
transcript_187505.nic	chr8	+	2134	13	ISM	ENSG00000184661.14	ENST00000330560.8	3486	15	-284	19284	-250	2792	5prime_fragment	FALSE	canonical	3	231	junction_7	22.2727723664767	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATAGGAGGAAGTCTCAA	25458892	False	NA	NA	False	AATACA	-29	NA	25458948	25488627	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_25459474_25460239_25460301_25460383_25460555_25462053_25462209_25466174_25466326_25468216_25468414_25469895_25469981_25479912_25480125_25483398_25483487_25483965_25484211_25485758_25485838_25487245_25487335_25488551
transcript_187506.nic	chr8	+	2128	13	ISM	ENSG00000184661.14	ENST00000330560.8	3486	15	-216	19222	-182	2854	5prime_fragment	FALSE	canonical	3	231	junction_7	22.2727723664767	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCATGTGTTTAAAGAT	25458460	True	NA	NA	False	AAGAAA	-39	NA	25459016	25488689	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_25459474_25460239_25460301_25460383_25460555_25462053_25462209_25466174_25466326_25468216_25468414_25469895_25469981_25479912_25480125_25483398_25483487_25483965_25484211_25485758_25485838_25487245_25487335_25488551
transcript_187510.known	chr8	-	5166	16	FSM	ENSG00000221818.9	ENST00000520164.6	5166	16	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_15	3.97994974842648	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGACCTTTGCTTTTT	-26044624	True	NA	NA	False	AATAAA	-19	NA	26045413	25841724	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_25844641_25850593_25850762_25858318_25858505_25861048_25861227_25861308_25861375_25862708_25862798_25886754_25886882_25887841_25887973_25889751_25889870_25908473_25908556_26033084_26033154_26040027_26040102_26040615_26040672_26040938_26041003_26042094_26042252_26044728
transcript_187513.known	chr8	-	2505	6	FSM	ENSG00000221818.9	ENST00000517825.1	2505	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	4.4988887516808	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-26044389	False	NA	NA	False	NA	NA	NA	26045178	26031449	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_26033154_26040027_26040102_26040615_26040672_26040938_26041003_26042094_26042252_26044728
transcript_187515.known	chr8	+	3923	10	FSM	ENSG00000221914.11	ENST00000380737.8	3923	10	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_7	27.2600644003478	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTCTTGTCAAGTTGCT	26288365	True	NA	14	True	AATAAA	-19	NA	26291507	26372680	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_26291827_26293665_26293741_26338889_26338988_26354467_26354634_26360168_26360282_26360973_26361152_26362683_26362849_26363720_26363891_26366314_26366407_26370133
transcript_187525.known	chr8	+	3452	6	FSM	ENSG00000104765.16	ENST00000380629.7	3452	6	0	0	0	0	multi-exon	FALSE	canonical	3	948	junction_4	59.2128364461626	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGTCAGTATATCATTT	26377840	True	NA	12	True	ATTAAA	-16	NA	26383053	26413127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_26383231_26391242_26391427_26395229_26395303_26407999_26408104_26408226_26408377_26410363
transcript_187528.known	chr8	+	915	6	FSM	ENSG00000104765.16	ENST00000523515.5	915	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	403.133030152579	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTCTTTTCCGCAAATG	26378164	False	NA	NA	False	NA	NA	NA	26383377	26410666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_26383479_26391242_26391427_26395229_26395303_26407999_26408104_26408226_26408377_26410363
transcript_187529.known	chr8	+	739	6	FSM	ENSG00000104765.16	ENST00000520409.5	739	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	402.341645868284	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACCACCCTGTTTTTACA	26383276	True	NA	NA	False	NA	NA	NA	26383414	26410509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_26383497_26391242_26391427_26395229_26395303_26407999_26408104_26408226_26408377_26410363
transcript_18753.known	chr1	-	6399	7	FSM	ENSG00000069275.13	ENST00000367142.5	6399	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_6	24.2859126976022	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACACACTTGCATTCAATT	-205742774	True	NA	-1	True	AATAAA	-21	NA	205750182	205712821	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_205718480_205719526_205719677_205720500_205720654_205723925_205723982_205727699_205727806_205729571_205729622_205749956
transcript_187535.known	chr8	+	502	4	FSM	ENSG00000104765.16	ENST00000521254.1	502	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	443.881615849191	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTTACATATCCAATTC	26395302	True	NA	NA	False	NA	NA	NA	26395616	26410519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_26395709_26407999_26408104_26408226_26408377_26410363
transcript_187539.known	chr8	+	4798	14	FSM	ENSG00000092964.18	ENST00000521913.7	4798	14	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_1	231.474026301162	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGTGTCTGTATTGAGA	26513873	True	NA	18	True	AATAAA	-20	NA	26514030	26658175	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_26514680_26581968_26582058_26583798_26583984_26624142_26624308_26626616_26626679_26627214_26627296_26627871_26627941_26634779_26634901_26643438_26643596_26643949_26644092_26647629_26647801_26652256_26652437_26653231_26653398_26655614
transcript_18754.nic	chr1	-	785	6	ISM	ENSG00000069275.13	ENST00000367142.5	6399	7	-112	6773	-112	-1143	5prime_fragment	FALSE	canonical	3	50	junction_5	18.5967739137733	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGGTTAAGAAGTCCAAAC	NA	False	NA	20	True	AAAAAG	-12	NA	205750294	205719594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_205719677_205720500_205720654_205723925_205723982_205727699_205727806_205729571_205729622_205749956
transcript_187541.known	chr8	+	4603	14	FSM	ENSG00000092964.18	ENST00000311151.9	4603	14	0	0	0	0	multi-exon	FALSE	canonical	3	723	junction_5	58.2917575141018	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTCTGTATTGAGATGT	26577779	False	NA	21	True	AATAAA	-23	NA	26577842	26658178	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_26578294_26581968_26582058_26583798_26583984_26624142_26624308_26626616_26626679_26627214_26627296_26627871_26627941_26634779_26634901_26643438_26643596_26643949_26644092_26647629_26647801_26652256_26652437_26653231_26653398_26655614
transcript_187544.nnic	chr8	+	4357	14	NNC	ENSG00000092964.18	novel	728	5	NA	NA	273	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	228.38058653855	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGTGTCTGTATTGAGA	26578400	True	NA	18	True	AATAAA	-20	NA	26578677	26658175	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_26578886_26581968_26582058_26583798_26583984_26624142_26624308_26626616_26626679_26627214_26627296_26627871_26627941_26634779_26634901_26643438_26643596_26643949_26644092_26647629_26647801_26652256_26652437_26653231_26653398_26655614
transcript_187545.known	chr8	-	4730	3	FSM	ENSG00000240694.9	ENST00000522362.7	4730	3	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGAGTTTTTCTGTTTCC	-26513098	True	NA	-21	True	AATAAA	-16	NA	26513872	26504700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_26509244_26509547_26509678_26513815
transcript_187548.known	chr8	-	4183	6	FSM	ENSG00000104228.13	ENST00000305364.9	4183	6	0	0	0	0	multi-exon	TRUE	canonical	3	50	junction_3	9.3936148526539	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTCCAATTTTTATTTA	-27310077	True	NA	-8	True	ACTAAA	-15	NA	27311272	27284885	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_27288128_27289161_27289281_27290155_27290179_27294079_27294311_27298463_27298560_27310800
transcript_187551.known	chr8	-	423	3	FSM	ENSG00000104228.13	ENST00000519219.1	423	3	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	4.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCAGGACCAGCTGGGAG	-27309661	False	NA	NA	False	NA	NA	NA	27310856	27294039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_27294311_27298463_27298560_27310800
transcript_187555.known	chr8	+	4074	31	FSM	ENSG00000120899.18	ENST00000346049.10	4074	31	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	3.47067076450008	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCGGTTTGTTTTGTTTG	27325488	True	NA	14	True	ATTAAA	-15	NA	27325551	27459386	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_27325682_27397547_27397789_27419894_27420074_27420656_27420745_27422303_27422384_27430092_27430156_27430363_27430419_27430875_27431017_27431397_27431473_27432259_27432362_27433434_27433553_27434092_27434133_27434512_27434560_27435742_27435794_27436250_27436349_27437121_27437207_27437395_27437497_27437764_27437881_27439030_27439132_27439308_27439399_27440236_27440442_27442874_27442984_27444205_27444272_27445793_27445920_27450748_27450896_27451042_27451079_27451484_27451510_27453113_27453161_27454153_27454292_27454530_27454612_27458293
transcript_187561.known	chr8	+	2776	19	FSM	ENSG00000120915.14	ENST00000521400.6	2776	19	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_13	7.6955975870768	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCAGCAGCACACTTGCA	27489451	True	NA	NA	False	NA	NA	NA	27491142	27545564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_27491310_27500925_27501011_27503603_27503764_27504955_27505147_27506871_27506995_27511835_27511911_27515717_27515814_27516319_27516399_27518037_27518073_27520882_27520910_27522422_27522509_27525361_27525474_27536783_27536856_27538658_27538693_27540553_27540657_27541472_27541543_27543748_27543830_27544185_27544245_27544443
transcript_187563.nic	chr8	+	2728	17	ISM	ENSG00000120915.14	ENST00000521400.6	2776	19	-44	647	-26	-2	intron_retention	FALSE	canonical	3	75	junction_13	7.33889467154285	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTGGCTGTCTTTGTT	27489407	True	NA	6	True	AATAAA	-14	NA	27491098	27544917	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_27491310_27500925_27501011_27503603_27503764_27504955_27505147_27506871_27506995_27511835_27511911_27515717_27515814_27516319_27516399_27518037_27518073_27520882_27520910_27522422_27522509_27525361_27525474_27536783_27536856_27538658_27538693_27540553_27540657_27541472_27541543_27543748
transcript_187567.nic	chr8	+	1035	6	ISM	ENSG00000120915.14	ENST00000520623.5	1923	14	-26	27155	-26	0	5prime_fragment	FALSE	canonical	3	80	junction_3	5.70613704707484	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	27489407	True	NA	NA	False	NA	NA	NA	27491098	27512100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_27491310_27500925_27501011_27503603_27503764_27504955_27505147_27506871_27506995_27511835
transcript_187571.known	chr8	-	2749	9	FSM	ENSG00000120885.22	ENST00000316403.15	2749	9	0	0	0	0	multi-exon	TRUE	canonical	3	1088	junction_4	105.03087343729	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTCTTTTCCACTGTTA	-27614077	True	NA	NA	False	NA	NA	NA	27614700	27596916	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_27598251_27598459_27598636_27599779_27600010_27604290_27604396_27604923_27605336_27606353_27606525_27608937_27609087_27610474_27610601_27614654
transcript_187574.known	chr8	-	2807	8	FSM	ENSG00000120885.22	ENST00000522299.5	2807	8	0	0	0	0	multi-exon	FALSE	canonical	3	1088	junction_3	110.890458911265	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTTGGAGGGTCCTCTTT	-27614070	True	NA	-29	True	AATAAA	-18	NA	27614693	27597995	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_27598251_27598459_27600010_27604290_27604396_27604923_27605336_27606353_27606525_27608937_27609087_27610474_27610601_27614654
transcript_187577.known	chr8	-	303	3	FSM	ENSG00000120885.22	ENST00000519472.5	303	3	0	0	0	0	multi-exon	FALSE	canonical	3	1161	junction_2	123.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGAGGAGCCGCTACCGC	-27614058	True	NA	21	True	AAGAAA	-5	NA	27614681	27608936	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_27609087_27610474_27610601_27614654
transcript_187588.known	chr8	+	3787	6	FSM	ENSG00000168077.14	ENST00000301904.4	3787	6	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	12.6743836142039	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGTGTCTTTGAGTCCT	27633227	True	NA	17	True	AGTAAA	-16	NA	27633901	27673018	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_27634208_27649701_27649801_27651507_27651628_27656781_27656881_27658495_27659540_27670899
transcript_187589.known	chr8	+	1910	6	FSM	ENSG00000168077.14	ENST00000337221.8	1910	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	34.1818665376834	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATGTTTATTTTACTA	27633193	True	NA	14	True	AATAAA	-27	NA	27633867	27676776	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_27634208_27649701_27649801_27651507_27651628_27656781_27656881_27658495_27659540_27676568
transcript_18759.nic	chr1	-	550	4	ISM	ENSG00000069275.13	ENST00000367142.5	6399	7	-112	11104	-112	-5474	5prime_fragment	FALSE	canonical	3	50	junction_3	15.1510909031513	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGTAAACTATTTTAAATG	NA	False	NA	25	True	NA	NA	NA	205750294	205723925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_205723982_205727699_205727806_205729571_205729622_205749956
transcript_187591.nic	chr8	+	2162	5	ISM	ENSG00000168077.14	ENST00000301904.4	3787	6	-156	13141	-122	-13141	5prime_fragment	FALSE	canonical	3	86	junction_4	7.59522876548166	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAGAGAGAGAGAAAAGAA	27633727	True	NA	NA	False	NA	NA	NA	27633745	27659877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_27634208_27649701_27649801_27651507_27651628_27656781_27656881_27658495
transcript_187592.nnic	chr8	+	2778	5	NIC	ENSG00000168077.14	novel	3787	6	NA	NA	-4	-3	combination_of_known_splicesites	FALSE	canonical	2	7	junction_4	41.6112965431264	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGAGGTGTCTTTGAGT	27633189	True	NA	14	True	AGTAAA	-13	NA	27633863	27673015	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_27634208_27649701_27649801_27651507_27651628_27656781_27656881_27670899
transcript_187594.nnic	chr8	+	3722	5	NIC	ENSG00000168077.14	novel	3787	6	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	37.8252561128144	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGTGTCTTTGAGTCCT	27633172	True	NA	17	True	AGTAAA	-16	NA	27633846	27673018	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_27634208_27649701_27649801_27656781_27656881_27658495_27659540_27670899
transcript_18760.known	chr1	-	3308	6	FSM	ENSG00000117280.13	ENST00000367139.8	3308	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	23.9131762842162	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGGTGGTTATTGGCCT	-205774606	True	NA	-12	True	AATAAA	-19	NA	205775482	205767985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_205770454_205770732_205770855_205771471_205771654_205772495_205772568_205774832_205775087_205775272
transcript_187605.known	chr8	+	3754	11	FSM	ENSG00000171320.15	ENST00000305188.13	3754	11	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_4	17.8044938147649	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGAGGCTTCCCTTAATC	27770245	True	NA	NA	False	NA	NA	NA	27774553	27805316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_27774608_27775498_27775568_27776361_27777170_27780173_27780268_27783999_27784058_27787884_27788003_27788846_27788979_27791962_27792053_27792667_27792812_27799540_27799717_27803305
transcript_18761.known	chr1	-	1723	6	FSM	ENSG00000117280.13	ENST00000235932.8	1723	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	23.9131762842162	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAGAATAGTCATTTT	-205774573	True	NA	NA	False	NA	NA	NA	205775449	205769436	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_205770454_205770732_205770855_205771471_205771654_205772495_205772568_205774832_205775087_205775373
transcript_187611.known	chr8	-	3627	9	FSM	ENSG00000147419.19	ENST00000356537.9	3627	9	0	0	0	0	multi-exon	FALSE	canonical	3	382	junction_6	36.5684290064531	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTGTGTGAGAGAGATT	-27764868	True	NA	-5	True	AATAAA	-21	NA	27772640	27733315	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_27736246_27740471_27740518_27748076_27748280_27748494_27748599_27752511_27752588_27756718_27756771_27762418_27762459_27765203_27765252_27772512
transcript_187617.known	chr8	-	3586	8	FSM	ENSG00000147419.19	ENST00000520486.5	3586	8	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_5	127.942908186042	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGTGTGTGAGAGAGA	-27764881	False	NA	-7	True	AATAAA	-19	NA	27772653	27733317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_27736246_27740471_27740518_27748076_27748280_27748494_27748599_27752511_27752588_27762418_27762459_27765203_27765252_27772512
transcript_187618.known	chr8	-	977	8	FSM	ENSG00000147419.19	ENST00000519509.5	977	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	147.612841651423	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCTTGAAACACTTTTCA	-27764868	True	NA	33	True	AAAACA	-2	NA	27772640	27735861	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_27736246_27740471_27740518_27748076_27748280_27752511_27752588_27756718_27756771_27762418_27762459_27765203_27765252_27772512
transcript_187622.known	chr8	-	877	8	FSM	ENSG00000147419.19	ENST00000517979.1	877	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	195.603722680655	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGAGCTGTGGCATTGAGA	-27764841	True	NA	NA	False	AAAAAG	-43	NA	27772613	27748071	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_27748280_27748494_27748599_27752511_27752588_27756718_27756771_27762418_27762459_27764285_27764534_27765203_27765252_27772512
transcript_187623.known	chr8	-	1836	8	FSM	ENSG00000168078.10	ENST00000301905.9	1836	8	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_2	12.0678354753959	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTGTCTCAGCATTATT	-27836993	True	NA	-24	True	AATAAA	-44	NA	27837817	27809623	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_27810502_27810957_27811135_27820564_27820695_27822318_27822489_27823062_27823206_27828104_27828199_27833055_27833134_27837651
transcript_187627.known	chr8	-	1734	7	FSM	ENSG00000147419.19	ENST00000520202.5	1734	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	189.310517991532	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACATTGATATATGAATTC	-27764867	True	NA	-15	True	AATAAA	-23	NA	27772639	27735051	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_27736246_27740471_27740518_27748076_27748280_27752511_27752588_27762418_27762459_27765203_27765252_27772512
transcript_187629.nic	chr8	-	671	7	ISM	ENSG00000147419.19	ENST00000356537.9	3627	9	-15	14756	-2	0	5prime_fragment	FALSE	canonical	3	382	junction_4	41.0639744788543	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGAGCTGTGGCATTGAGA	NA	False	NA	NA	False	AAAAAG	-43	NA	27772655	27748071	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_27748280_27748494_27748599_27752511_27752588_27756718_27756771_27762418_27762459_27765203_27765252_27772512
transcript_187634.nic	chr8	+	500	3	ISM	ENSG00000171320.15	ENST00000305188.13	3754	11	-31	28609	-31	0	5prime_fragment	FALSE	canonical	3	229	junction_1	9.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAGAACAACAAAAAACC	27770214	True	NA	NA	False	NA	NA	NA	27774522	27776707	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_27774608_27775498_27775568_27776361
transcript_187635.nic	chr8	+	663	3	ISM	ENSG00000171320.15	ENST00000305188.13	3754	11	-31	28446	-31	0	5prime_fragment	FALSE	canonical	3	229	junction_1	9.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCAATGCTCCTCGGGTT	27770214	True	NA	NA	False	NA	NA	NA	27774522	27776870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_27774608_27775498_27775568_27776361
transcript_187640.known	chr8	+	3148	15	FSM	ENSG00000134014.17	ENST00000256398.13	3148	15	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	28.6624443180569	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGAGTCATGTGGTTTTCT	28090155	True	NA	7	True	AATAAA	-19	NA	28093138	28191153	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_28093234_28097218_28097319_28099827_28099967_28106712_28106784_28107912_28107977_28110369_28110439_28113018_28113174_28129501_28129664_28132277_28132405_28137697_28137892_28155941_28156033_28158567_28158634_28160228_28160457_28161996_28162079_28189648
transcript_187643.known	chr8	+	1914	14	FSM	ENSG00000134014.17	ENST00000524103.5	1914	14	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	50.2679212353708	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCTGCAGGTGGCCTATT	28090128	True	NA	-94	True	NA	NA	NA	28093111	28189992	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_28093234_28099827_28099967_28106712_28106784_28107912_28107977_28110369_28110439_28113018_28113174_28129501_28129664_28132277_28132405_28137697_28137892_28155941_28156033_28158567_28158634_28160228_28160457_28161996_28162079_28189648
transcript_187647.known	chr8	+	1924	13	FSM	ENSG00000134014.17	ENST00000519261.5	1924	13	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	69.2597265531869	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTAAGAGTAGTTTATT	28090156	True	NA	8	True	AATAAA	-22	NA	28093139	28190094	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_28093234_28099827_28099967_28106712_28106784_28110369_28110439_28113018_28113174_28129501_28129664_28132277_28132405_28137697_28137892_28155941_28156033_28158567_28158634_28160228_28160457_28161996_28162079_28189648
transcript_187649.known	chr8	+	1923	13	FSM	ENSG00000134014.17	ENST00000523687.5	1923	13	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_2	72.9257613375868	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTAAGAGTAGTTTATT	28090118	True	NA	8	True	AATAAA	-22	NA	28093101	28190094	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_28093234_28097218_28097319_28106712_28106784_28110369_28110439_28113018_28113174_28129501_28129664_28132277_28132405_28137697_28137892_28155941_28156033_28158567_28158634_28160228_28160457_28161996_28162079_28189648
transcript_187656.nnic	chr8	-	2474	11	NIC	ENSG00000186918.14	novel	4797	10	NA	NA	104	-9	combination_of_known_splicesites	FALSE	canonical	2	2	junction_9	29.4210808774933	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-28386273	False	NA	NA	False	NA	NA	NA	28386324	28348286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_28348831_28349124_28349229_28350063_28350157_28351494_28351808_28352572_28352674_28353172_28353409_28356669_28356780_28359591_28359825_28360884_28361183_28375261_28375383_28386003
transcript_187657.nnic	chr8	-	2238	10	FSM	ENSG00000186918.14	ENST00000523095.5	1790	10	-176	-272	-111	-9	multi-exon	FALSE	canonical	3	33	junction_9	15.3341384651742	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-28386198	False	NA	NA	False	NA	NA	NA	28386249	28348286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_28348831_28349124_28349229_28350063_28350157_28351494_28351808_28352572_28352674_28353172_28353409_28356669_28356780_28359591_28359825_28360884_28361143_28386003
transcript_187658.nnic	chr8	-	2042	10	NIC	ENSG00000186918.14	novel	4797	10	NA	NA	4	-9	combination_of_known_splicesites	FALSE	canonical	3	10	junction_9	22.1130652402824	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-28386391	True	NA	NA	False	NA	NA	NA	28386442	28348286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_28348831_28349124_28349229_28350063_28350157_28351494_28351808_28352572_28352674_28353172_28353409_28356669_28356780_28359591_28359825_28360884_28361143_28386392
transcript_187659.nnic	chr8	-	2378	10	NIC	ENSG00000186918.14	novel	4797	10	NA	NA	79	-9	combination_of_known_junctions	FALSE	canonical	3	18	junction_9	19.7190138235369	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-28386298	False	NA	NA	False	NA	NA	NA	28386349	28348286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_28348831_28349124_28349229_28350063_28350157_28351494_28351808_28352572_28352674_28353172_28353409_28356669_28356780_28359591_28359825_28360884_28361183_28386003
transcript_187661.known	chr8	-	1254	9	FSM	ENSG00000214050.8	ENST00000380254.7	1254	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	31.6810274454602	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGTGGACAGATTTACG	-28489191	True	NA	-25	True	AGTAAA	-16	NA	28490229	28428411	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_28428737_28429377_28429404_28447170_28447274_28452243_28452477_28456765_28456931_28463611_28463819_28473771_28473808_28483347_28483463_28490185
transcript_187662.known	chr8	-	1205	7	FSM	ENSG00000214050.8	ENST00000346498.6	1205	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	22.300971578237	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTACGGTATTTCAGTAA	-28489240	True	NA	-61	True	NA	NA	NA	28490278	28428447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_28428737_28447170_28447274_28452243_28452477_28456765_28456931_28463611_28463819_28483347_28483463_28490185
transcript_187664.known	chr8	-	2983	16	FSM	ENSG00000214050.8	ENST00000521548.5	2983	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	25.2802953569244	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-28489218	True	NA	NA	False	NA	NA	NA	28490256	28348286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_28348831_28349124_28349229_28350063_28350157_28351494_28351808_28352572_28352674_28353172_28353409_28356669_28356780_28359591_28359825_28360884_28361183_28447170_28447274_28452243_28452477_28456765_28456931_28463611_28463819_28473771_28473808_28483347_28483484_28490185
transcript_187669.nnic	chr8	-	2309	11	NIC	ENSG00000186918.14	novel	1790	10	NA	NA	-34	18	combination_of_known_splicesites	FALSE	canonical	2	7	junction_9	28.4051051749505	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTTCTGGCTGATGGGTG	-28386085	True	NA	NA	False	NA	NA	NA	28386172	28348259	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_28348831_28349124_28349229_28350063_28350157_28351494_28351808_28352572_28352674_28353172_28353409_28356669_28356780_28359591_28359825_28360884_28361143_28375261_28375383_28386003
transcript_18767.nnic	chr1	-	1725	6	NNC	ENSG00000117280.13	novel	1723	6	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_5	24.2932089275995	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAGAATAGTCATTTT	-205774603	True	NA	NA	False	NA	NA	NA	205775479	205769436	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_205770454_205770732_205770855_205771471_205771654_205772495_205772568_205774832_205775087_205775401
transcript_187670.nic	chr8	-	2254	11	NIC	ENSG00000186918.14	novel	4797	10	NA	NA	-6	18	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	31.1462678342045	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTTCTGGCTGATGGGTG	NA	False	NA	NA	False	NA	NA	NA	28386466	28348259	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_28348831_28349124_28349229_28350063_28350157_28351494_28351808_28352572_28352674_28353172_28353409_28356669_28356780_28359591_28359825_28360884_28361183_28375261_28375383_28386392
transcript_187672.known	chr8	-	1790	10	FSM	ENSG00000186918.14	ENST00000523095.5	1790	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_9	15.3341384651742	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGCGAACATTTTATTTT	-28386022	False	NA	NA	False	NA	NA	NA	28386073	28348558	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_28348831_28349124_28349229_28350063_28350157_28351494_28351808_28352572_28352674_28353172_28353409_28356669_28356780_28359591_28359825_28360884_28361143_28386003
transcript_187675.known	chr8	-	4797	10	FSM	ENSG00000186918.14	ENST00000344423.10	4797	10	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_9	23.6220236220354	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAATGTGTGCCTGTCCTT	NA	False	NA	-5	True	AATAAA	-17	NA	28386460	28345589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_28348831_28349124_28349229_28350063_28350157_28351494_28351808_28352572_28352674_28353172_28353409_28356669_28356780_28359591_28359825_28360884_28361183_28386392
transcript_187679.nic	chr8	-	2004	10	NIC	ENSG00000186918.14	novel	4797	10	NA	NA	-79	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_9	19.7190138235369	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACAAAAATATTTTTCCC	-28386166	False	NA	NA	False	TTTAAA	-6	NA	28386217	28348528	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_28348831_28349124_28349229_28350063_28350157_28351494_28351808_28352572_28352674_28353172_28353409_28356669_28356780_28359591_28359825_28360884_28361183_28386003
transcript_187686.known	chr8	+	13770	8	FSM	ENSG00000104290.11	ENST00000240093.8	13770	8	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_6	42.5186633690886	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGTCATTAGTACCTG	28489869	True	NA	12	True	AATAAA	-15	NA	28494211	28574258	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_28494344_28499932_28499979_28502669_28503203_28520637_28520835_28527146_28528165_28551602_28551752_28555737_28555972_28562797
transcript_187691.known	chr8	+	13740	7	FSM	ENSG00000104290.11	ENST00000537916.2	13740	7	0	0	0	0	multi-exon	TRUE	canonical	3	65	junction_5	48.0326856306088	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAGTACCTGATTAATTAT	28489862	True	NA	21	True	AATAAA	-24	NA	28494204	28574267	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_28494344_28502669_28503203_28520637_28520835_28527146_28528165_28551602_28551752_28555737_28555972_28562797
transcript_187700.nic	chr8	+	1639	5	ISM	ENSG00000104290.11	ENST00000240093.8	13770	8	-50	46431	-43	24708	5prime_fragment	FALSE	canonical	3	105	junction_1	31.5941054628866	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTAGTGGCGTGTGTTTTG	28494151	False	NA	6	True	AATAAA	-15	NA	28494161	28527827	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_28494344_28499932_28499979_28502669_28503203_28520637_28520835_28527146
transcript_18771.known	chr1	-	1157	5	FSM	ENSG00000117280.13	ENST00000414729.1	1157	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	8.40758586040012	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTCTCTTCCCTTTGGTT	-205774583	True	NA	NA	False	NA	NA	NA	205775459	205770299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_205770454_205770732_205770855_205771471_205771654_205772495_205772568_205774832
transcript_187710.nic	chr8	+	3762	7	NIC	ENSG00000012232.9	novel	1779	7	NA	NA	-4	119	combination_of_known_junctions	TRUE	canonical	3	87	junction_1	87.4688833560573	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAAGTTTCAGATTTGCC	28619356	True	NA	NA	False	TTTAAA	-3	NA	28622724	28751213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_28622811_28713456_28713551_28715584_28718208_28731222_28731351_28737518_28737664_28743085_28743215_28750656
transcript_187711.nic	chr8	+	6236	7	NIC	ENSG00000012232.9	novel	1779	7	NA	NA	-4	855	combination_of_known_junctions	FALSE	canonical	3	87	junction_1	87.4688833560573	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTTGGAGGTCTTTTGT	28619356	True	NA	22	True	AATAAA	-24	NA	28622724	28753687	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_28622811_28713456_28713551_28715584_28718208_28731222_28731351_28737518_28737664_28743085_28743215_28750656
transcript_187716.known	chr8	+	8221	7	FSM	ENSG00000012232.9	ENST00000220562.9	8221	7	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	69.9724151997692	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCAGGTGTGGTGGCAC	28696652	True	NA	NA	False	AATACA	-5	NA	28701500	28755599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_28701660_28713456_28713551_28715584_28718208_28731222_28731351_28737518_28737664_28743085_28743215_28750656
transcript_187725.nnic	chr8	+	3590	5	NIC	ENSG00000012232.9	novel	8221	7	NA	NA	2	855	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	134.895098131845	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTTGGAGGTCTTTTGT	28696654	True	NA	22	True	AATAAA	-24	NA	28701502	28753687	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_28701660_28731222_28731351_28737518_28737664_28743085_28743215_28750656
transcript_187733.nic	chr8	-	2689	18	NIC	ENSG00000104299.15	novel	2549	17	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_17	52.1883069007094	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTCCTCTGTTGAAC	-28887259	True	NA	-5	True	AATAAA	-18	NA	28889936	28767660	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_28768323_28769888_28770027_28770981_28771081_28775758_28775927_28777828_28777954_28780822_28780995_28787828_28787890_28793806_28793988_28796543_28796656_28812326_28812462_28813491_28813613_28835291_28835379_28837636_28837777_28846746_28846810_28850212_28850274_28859435_28859564_28862039_28862213_28889873
transcript_187738.known	chr8	-	2549	17	FSM	ENSG00000104299.15	ENST00000521022.6	2549	17	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_3	15.6599608875629	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTCCTCTGTTGAAC	-28887292	True	NA	-5	True	AATAAA	-18	NA	28889969	28767660	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_28768323_28769888_28770027_28770981_28771081_28775758_28775927_28777828_28777954_28780822_28780995_28787828_28787890_28793806_28793988_28796543_28796656_28812326_28812462_28813491_28813613_28835291_28835379_28837636_28837777_28846746_28846810_28850212_28850274_28859435_28859564_28889873
transcript_187739.known	chr8	-	2578	17	FSM	ENSG00000104299.15	ENST00000523303.5	2578	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	41.7746465424903	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTCCTCTGTTGAAC	-28887236	True	NA	-5	True	AATAAA	-18	NA	28889913	28767660	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_28768323_28769888_28770027_28770981_28771166_28775758_28775927_28777828_28777954_28780822_28780995_28787828_28787890_28793806_28793988_28796543_28796656_28812326_28812462_28813491_28813613_28835291_28835379_28837636_28837777_28846746_28846810_28850212_28850274_28859435_28859564_28889873
transcript_187748.known	chr8	-	2759	16	FSM	ENSG00000104299.15	ENST00000416984.6	2759	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_13	42.8620526288179	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTCCTCTGTTGAAC	-28890231	False	NA	-5	True	AATAAA	-18	NA	28890242	28767660	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_28768323_28769888_28770027_28770981_28771081_28775758_28775927_28777828_28777954_28780822_28780995_28787828_28787890_28793806_28793988_28796543_28796656_28812326_28812462_28813491_28813613_28835291_28835379_28837636_28837777_28850212_28850274_28859435_28859564_28889873
transcript_187749.nic	chr8	-	2468	16	NIC	ENSG00000104299.15	novel	2549	17	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_11	40.5739927649337	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTCCTCTGTTGAAC	-28887298	True	NA	-5	True	AATAAA	-18	NA	28889975	28767660	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_28768323_28769888_28770027_28770981_28771081_28775758_28775927_28777828_28777954_28780822_28780995_28787828_28787890_28793806_28793988_28796543_28796656_28812326_28812462_28813491_28813613_28837636_28837777_28846746_28846810_28850212_28850274_28859435_28859564_28889873
transcript_18775.known	chr1	-	1441	4	FSM	ENSG00000117280.13	ENST00000446390.6	1441	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	32.8362942827327	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTCATGCCTGTAATCC	-205774357	False	NA	NA	False	NA	NA	NA	205775233	205769717	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_205770454_205770732_205770855_205771471_205771654_205774832
transcript_187758.known	chr8	-	1154	10	FSM	ENSG00000104299.15	ENST00000520983.5	1154	10	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_7	15.5547618845147	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTTCTCACATTACTG	-28887244	True	NA	NA	False	AATAAA	-9	NA	28889921	28793728	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_28793988_28796543_28796656_28812326_28812462_28813491_28813613_28835291_28835379_28837636_28837777_28846746_28846810_28850212_28850274_28859435_28859564_28889873
transcript_187775.nnic	chr8	+	2494	11	NNC	ENSG00000147421.18	novel	2216	11	NA	NA	-22	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	3.87943294825416	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGCTTGAGAGCATTGGA	NA	False	NA	NA	False	ATTAAA	-18	NA	28890372	29051918	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_28890679_28963810_28963891_28970042_28970520_28980070_28980157_29009071_29009183_29018759_29018914_29045360_29045444_29047357_29047454_29048953_29049049_29049289_29049395_29051017
transcript_187778.nnic	chr8	+	2491	11	NNC	ENSG00000147421.18	novel	1765	10	NA	NA	-22	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	3.97994974842648	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGCTTGAGAGCATTGGA	NA	False	NA	NA	False	ATTAAA	-18	NA	28890372	29051918	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_28890679_28963810_28963891_28970042_28970520_28980070_28980157_29009071_29009183_29018759_29018914_29045360_29045444_29047357_29047454_29048956_29049049_29049289_29049395_29051017
transcript_187787.known	chr8	+	3711	10	FSM	ENSG00000147421.18	ENST00000287701.15	3711	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	3.28107179116298	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTGAAGTGAAGTGGAGC	28889965	True	NA	NA	False	AATATA	-22	NA	28890394	29053262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_28890679_28963810_28963891_28970042_28970520_28980070_28980157_29009071_29009183_29018759_29018914_29045360_29045444_29047357_29047454_29048953_29049049_29051017
transcript_187788.known	chr8	+	1765	10	FSM	ENSG00000147421.18	ENST00000558662.5	1765	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	3.29234053111757	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGCAATACCTGCATGAC	28889965	True	NA	NA	False	NA	NA	NA	28890394	29049591	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_28890679_28963810_28963891_28970042_28970520_28980070_28980157_29009071_29009183_29018759_29018914_29045360_29045444_29047357_29047454_29048956_29049049_29049289
transcript_187789.nic	chr8	+	2385	10	NIC	ENSG00000147421.18	novel	2216	11	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_8	3.43187671366233	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGCTTGAGAGCATTGG	NA	False	NA	NA	False	ATTAAA	-17	NA	28890372	29051917	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_28890679_28963810_28963891_28970042_28970520_28980070_28980157_29009071_29009183_29018759_29018914_29045360_29045444_29047357_29047454_29048956_29049049_29051017
transcript_18779.known	chr1	-	5017	11	FSM	ENSG00000133065.11	ENST00000367137.4	5017	11	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_2	10.6117859005919	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTGGTGTTTCCTGTA	-205810316	True	NA	-2	True	AATAAA	-16	NA	205813198	205789094	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_205791719_205794869_205795019_205795343_205795479_205796923_205797004_205797903_205798052_205798668_205798816_205798956_205799102_205799758_205799831_205800952_205801061_205810069_205811088_205812807
transcript_187797.known	chr8	-	2765	18	FSM	ENSG00000197892.13	ENST00000521515.1	2765	18	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	2.82352941176471	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTATCTTTGCCATTCA	-29261784	True	NA	NA	False	AATAAA	-35	NA	29263097	29145862	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_29146541_29147391_29147603_29148576_29148768_29150296_29150384_29155725_29155857_29160732_29160868_29165661_29165773_29167372_29167586_29176067_29176180_29177465_29177579_29180103_29180239_29181918_29182007_29186291_29186473_29188514_29188608_29190996_29191058_29196186_29196200_29245345_29245440_29262979
transcript_187799.known	chr8	-	5553	4	FSM	ENSG00000120875.9	ENST00000240100.7	5553	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	3.77123616632825	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGCTTGGTTAGACCT	-29350207	True	NA	-1	True	AATAAA	-15	NA	29350684	29333063	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_29337412_29338281_29338502_29340097_29340244_29349845
transcript_187805.known	chr8	-	1981	6	FSM	ENSG00000133872.14	ENST00000518174.5	1981	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	300.864487768164	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAGTCTCATTCTTTCTA	-30083091	False	NA	-19	True	AATAAA	-13	NA	30083124	30063097	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_30063914_30065987_30066140_30066776_30066919_30069641_30070060_30073876_30074052_30082846
transcript_187807.known	chr8	-	1741	6	FSM	ENSG00000133872.14	ENST00000521265.5	1741	6	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	238.422314391921	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAATCAATAAAAACA	-30082915	False	NA	-47	True	NA	NA	NA	30082948	30063125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_30063914_30066027_30066140_30066776_30066919_30069641_30070060_30073876_30074056_30082846
transcript_187808.known	chr8	-	1803	5	FSM	ENSG00000133872.14	ENST00000520303.5	1803	5	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_4	259.908036620648	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTTAAAAAGAATCAATAAA	-30083120	False	NA	-51	True	NA	NA	NA	30083153	30063129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_30063914_30065987_30066140_30066776_30066919_30069641_30070060_30082846
transcript_187811.known	chr8	+	1054	7	FSM	ENSG00000104671.8	ENST00000221114.8	1054	7	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_1	26.1241693116207	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTTGTGGATTTGTAGC	30153574	True	NA	7	True	ATTAAA	-19	NA	30156368	30183639	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_30156407_30164110_30164176_30175084_30175191_30177125_30177215_30179407_30179456_30180487_30180631_30183074
transcript_187815.known	chr8	+	820	6	FSM	ENSG00000104671.8	ENST00000522141.5	820	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	108.161730755383	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTGACAAGAAAAGACATAC	30153524	True	NA	-62	True	TATAAA	-38	NA	30156318	30183461	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_30156407_30164110_30164176_30177125_30177215_30179407_30179456_30180487_30180631_30183074
transcript_187816.known	chr8	+	3163	4	FSM	ENSG00000104660.19	ENST00000321250.13	3163	4	0	0	0	0	multi-exon	FALSE	canonical	3	631	junction_3	41.515726605174	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTAGTCGTGTCCCAA	30088580	True	NA	NA	False	NA	NA	NA	30095407	30108524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_30095529_30101897_30101974_30104299_30104487_30105745
transcript_187818.known	chr8	+	1389	4	FSM	ENSG00000104660.19	ENST00000523116.5	1389	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	319.806538742131	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCCATATCTTTTCCAGA	30088652	True	NA	NA	False	NA	NA	NA	30095479	30138348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_30095529_30101897_30101974_30104299_30104487_30137271
transcript_187821.known	chr8	-	396	1	FSM	ENSG00000241511.1	ENST00000492525.1	396	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGTAATGCAGCATATAT	NA	False	NA	NA	False	AAAACA	-35	NA	30117779	30117383	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_30117400_30117800
transcript_187822.known	chr8	-	403	1	FSM	ENSG00000271869.1	ENST00000607315.1	403	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCGCGTCATTATGCCCT	-30156029	True	NA	-2	True	AATAAA	-19	NA	30156232	30155829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_30155800_30156200
transcript_187823.known	chr8	+	1646	1	FSM	ENSG00000127589.4	ENST00000518096.1	1646	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTGGAAAAAAAAAAAAAAAA	NA	False	NA	83	True	AATAAA	-11	NA	30351872	30353518	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_30351900_30353500
transcript_18783.nnic	chr1	-	4882	10	NIC	ENSG00000133065.11	novel	5017	11	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	34.1438496531338	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTGGTGTTTCCTGTA	-205810330	True	NA	-2	True	AATAAA	-16	NA	205813212	205789094	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_205791719_205795343_205795479_205796923_205797004_205797903_205798052_205798668_205798816_205798956_205799102_205799758_205799831_205800952_205801061_205810069_205811088_205812807
transcript_187838.known	chr8	+	2974	10	FSM	ENSG00000157110.16	ENST00000287771.9	2974	10	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_6	666.08320764464	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCATTGCTTGACAAATTC	30374719	True	NA	25	True	AATAAA	-20	NA	30384526	30572256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_30385159_30474778_30474857_30477798_30477838_30479314_30479378_30504285_30504437_30544493_30544625_30549499_30549586_30558886_30558957_30566256_30566361_30570636
transcript_187855.known	chr8	+	2874	9	FSM	ENSG00000157110.16	ENST00000397323.9	2874	9	0	0	0	0	multi-exon	FALSE	canonical	3	753	junction_8	396.069122755107	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCATTGCTTGACAAATTC	30374733	True	NA	25	True	AATAAA	-20	NA	30384540	30572256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_30385159_30474778_30474857_30477798_30477838_30479314_30479378_30504285_30504437_30544493_30544625_30558886_30558957_30566256_30566361_30570636
transcript_187886.known	chr8	+	1341	7	FSM	ENSG00000157110.16	ENST00000339877.8	1341	7	0	0	0	0	multi-exon	FALSE	canonical	3	763	junction_6	339.027366971393	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAGACTGCAGCGTTTTG	30384297	False	NA	NA	False	AATAAA	-28	NA	30384510	30547522	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_30385159_30474778_30474857_30477798_30477838_30479314_30479378_30504285_30504437_30544493_30544625_30547291
transcript_187889.known	chr8	+	842	7	FSM	ENSG00000157110.16	ENST00000520161.5	842	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	642.914889822561	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTTCAATAAAAATTTTAA	30385184	False	NA	NA	False	NA	NA	NA	30385202	30547483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_30385391_30474778_30474857_30477798_30477838_30479314_30479378_30504285_30504437_30544493_30544625_30547291
transcript_18789.known	chr1	+	2343	4	FSM	ENSG00000286619.1	ENST00000669196.1	2343	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGACCCCGGATTTCCC	205813203	True	NA	NA	False	AATAAA	-44	NA	205813346	205896052	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_205813586_205836238_205836304_205891155_205891310_205894167
transcript_187894.known	chr8	+	1076	6	FSM	ENSG00000157110.16	ENST00000517860.5	1076	6	0	0	0	0	multi-exon	FALSE	canonical	3	1456	junction_1	123.886399576386	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCCTGTAGAAAAGGAGA	30385071	False	NA	NA	False	NA	NA	NA	30385084	30545164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_30385159_30474778_30474857_30477798_30477838_30479314_30479378_30504285_30504437_30544493
transcript_18791.known	chr1	+	6884	23	FSM	ENSG00000266028.8	ENST00000573034.8	6884	23	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_11	58.6714482774646	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCAGTTCATATCCCTT	206199393	True	NA	10	True	AATAAA	-20	NA	206203540	206464436	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_206203651_206205428_206206038_206303280_206303474_206342845_206343009_206384013_206384077_206392688_206392905_206393544_206393674_206401420_206401646_206405248_206405351_206406376_206406575_206415888_206415974_206419372_206419401_206421249_206421275_206430161_206430223_206436964_206437043_206437963_206438099_206439975_206440082_206446074_206446300_206450385_206450466_206453199_206453381_206454877_206455025_206458622_206458948_206461036
transcript_187910.known	chr8	-	1747	8	FSM	ENSG00000197265.9	ENST00000355904.9	1747	8	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_1	18.3647844017415	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTAATGTTTTCTTTTAA	-30655616	True	NA	1	True	AATAAA	-17	NA	30658236	30578317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_30579038_30580280_30580397_30607056_30607151_30612298_30612482_30614607_30614716_30635031_30635124_30653432_30653603_30657972
transcript_187913.nic	chr8	-	968	7	ISM	ENSG00000197265.9	ENST00000355904.9	1747	8	-3	2025	-3	-2025	5prime_fragment	FALSE	canonical	3	378	junction_1	13.4122663591538	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAGAATATCTGAAGCGA	-30655619	True	NA	NA	False	NA	NA	NA	30658239	30580342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_30580397_30607056_30607151_30612298_30612482_30614607_30614716_30635031_30635124_30653432_30653603_30657972
transcript_187916.known	chr8	-	3034	13	FSM	ENSG00000104687.14	ENST00000221130.11	3034	13	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_11	41.016934172228	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATTTGTTACTGTGAGC	-30724060	True	NA	32	True	AATAAA	-21	NA	30727846	30678065	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_30679670_30680903_30681038_30681929_30682062_30684087_30684200_30689160_30689320_30692968_30693056_30696379_30696480_30700080_30700136_30703092_30703241_30708071_30708142_30709813_30709903_30712061_30712089_30727529
transcript_187923.known	chr8	+	1451	8	FSM	ENSG00000104691.16	ENST00000265616.10	1451	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	4.67297920965604	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATCTATCTCATCATTT	30743170	True	NA	27	True	AATAAA	-38	NA	30744163	30767006	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_30744278_30751395_30751519_30753034_30753106_30754664_30754788_30756764_30756888_30760887_30760930_30763272_30763348_30766226
transcript_187924.known	chr8	+	1624	8	FSM	ENSG00000104691.16	ENST00000380154.9	1624	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	13.5269949300181	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATCTATCTCATCATTT	30743180	True	NA	27	True	AATAAA	-38	NA	30744173	30767006	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_30744461_30751395_30751519_30753034_30753106_30754664_30754788_30756764_30756888_30760887_30760930_30763272_30763348_30766226
transcript_187925.known	chr8	+	702	8	FSM	ENSG00000104691.16	ENST00000615729.4	702	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.914311361867	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAAGGGAGAGCTCCCT	30743196	True	NA	-75	True	NA	NA	NA	30744189	30766394	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_30744278_30751506_30751519_30753034_30753106_30754664_30754788_30756764_30756888_30760887_30760930_30763272_30763348_30766226
transcript_187926.known	chr8	+	1202	7	FSM	ENSG00000104691.16	ENST00000341403.9	1202	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	15.1986841535707	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAATTTTGCCTTGTATT	30743195	True	NA	-74	True	NA	NA	NA	30744188	30766905	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_30744278_30751395_30751519_30753034_30753106_30756764_30756888_30760887_30760930_30763272_30763348_30766226
transcript_187928.known	chr8	-	1946	7	FSM	ENSG00000104695.13	ENST00000221138.9	1946	7	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_4	25.0183266160362	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCATTTATTGTGTTGTG	-30806465	True	NA	NA	False	AATAAA	-21	NA	30812818	30785615	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_30786308_30791196_30791316_30793916_30794079_30794191_30794282_30797580_30797755_30799545_30799756_30812319
transcript_187941.known	chr8	-	2218	2	FSM	ENSG00000172733.12	ENST00000523392.2	2218	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTATACTTTATGCTTC	-31032688	True	NA	NA	False	AATATA	-13	NA	31033356	31030849	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_31032789_31033077
transcript_187946.known	chr8	+	7575	35	FSM	ENSG00000165392.11	ENST00000298139.7	7575	35	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_4	16.4021688159985	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCACTGCTTTGACCTTTT	31027312	True	NA	NA	False	ATTAAA	-27	NA	31033809	31176138	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_31033974_31058371_31058544_31059152_31059266_31064288_31064435_31064914_31065064_31067032_31067183_31068257_31068328_31076172_31076288_31080866_31081297_31083698_31083780_31085165_31085247_31087775_31087921_31088889_31088966_31090464_31090533_31090833_31090943_31091829_31091899_31096767_31096851_31100848_31100956_31111614_31111800_31116353_31116529_31120242_31120425_31124521_31124624_31124907_31125001_31132364_31132507_31141429_31141601_31141680_31141776_31142625_31142702_31143549_31143624_31147052_31147129_31147363_31147477_31150340_31150456_31154623_31154756_31157367_31157531_31167021_31167231_31172994
transcript_187957.nic	chr8	+	1404	8	ISM	ENSG00000165392.11	ENST00000298139.7	7575	35	-3	99529	-3	-8619	5prime_fragment	FALSE	canonical	3	86	junction_4	13.1800715367666	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTAAGATTCAAAGTTGT	31027309	True	NA	NA	False	AATAAA	-18	NA	31033806	31076609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_31033974_31058371_31058544_31059152_31059266_31064288_31064435_31064914_31065064_31067032_31067183_31068257_31068328_31076172
transcript_187961.known	chr8	+	1703	7	FSM	ENSG00000157168.20	ENST00000650919.1	1703	7	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_4	2.7938424357067	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGCATTGAGGCATTT	32548056	True	NA	36	True	AATAAA	-42	NA	32548234	32743253	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_32548827_32595827_32596006_32605561_32605684_32614513_32614565_32616834_32616886_32727948_32728079_32742674
transcript_187963.known	chr8	+	1477	4	FSM	ENSG00000247134.8	ENST00000666042.1	1477	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	16.3571255285137	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCCATCACCCAATCCA	32922334	True	NA	23	True	AGTAAA	-1	NA	32927920	33045445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_32928094_32996200_32996317_33041634_33041744_33044366
transcript_187965.nic	chr8	+	627	4	FSM	ENSG00000247134.8	ENST00000685531.1	883	4	15	241	0	0	multi-exon	FALSE	canonical	3	68	junction_2	116.312796659124	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTTCATACATATATAT	32922381	True	NA	22	True	AATAAA	-19	NA	32927967	33044614	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_32928094_32996200_32996317_33041634_33041772_33044366
transcript_187966.nic	chr8	+	852	4	FSM	ENSG00000247134.8	ENST00000685531.1	883	4	15	16	0	0	multi-exon	FALSE	canonical	3	68	junction_2	116.312796659124	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTAAGGACTTTCACTTC	32922381	True	NA	8	True	AATAAA	-34	NA	32927967	33044839	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_32928094_32996200_32996317_33041634_33041772_33044366
transcript_187969.known	chr8	+	657	4	FSM	ENSG00000247134.8	ENST00000670899.1	657	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	136.675609463511	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTTCATACATATATAT	32922390	True	NA	22	True	AATAAA	-19	NA	32927976	33044614	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_32928094_32996200_32996356_33041634_33041772_33044366
transcript_187970.known	chr8	+	1314	3	FSM	ENSG00000247134.8	ENST00000666659.1	1314	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	99	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCCATCACCCAATCCA	32922381	True	NA	23	True	AGTAAA	-1	NA	32927967	33045445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_32928094_33041634_33041744_33044366
transcript_187972.known	chr8	+	1397	3	FSM	ENSG00000247134.8	ENST00000659524.1	1397	3	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	38.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCCATCACCCAATCCA	32922326	True	NA	23	True	AGTAAA	-1	NA	32927912	33045445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_32928094_33041634_33041772_33044366
transcript_187976.known	chr8	+	1277	3	FSM	ENSG00000247134.8	ENST00000657565.1	1277	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	38	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTACCCCAGCCAAACACT	32922390	True	NA	-12	True	NA	NA	NA	32927976	33045410	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_32928094_32996200_32996317_33044366
transcript_187978.known	chr8	+	634	2	FSM	ENSG00000247134.8	ENST00000664284.1	634	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACTTCAGGGAGTCTGA	32922357	True	NA	19	True	AATAAA	-45	NA	32927943	33044850	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_32928094_33044366
transcript_18798.nic	chr1	+	3559	22	NIC	ENSG00000266028.8	novel	6884	23	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_21	65.8308834470532	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGGATGCTTGTTGTTT	206199352	True	NA	-21	True	NA	NA	NA	206203499	206456131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_206203651_206205428_206206038_206303280_206303474_206342845_206343009_206384013_206384077_206392688_206392905_206393544_206393674_206401420_206401646_206405248_206405351_206406376_206406575_206415888_206415974_206419372_206419401_206421249_206421275_206430161_206430223_206436964_206437043_206437963_206438099_206439975_206440082_206446074_206446300_206450385_206450466_206453199_206453381_206454877_206455025_206455772
transcript_187985.known	chr8	-	3549	5	FSM	ENSG00000172728.16	ENST00000327671.10	3549	5	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	19.0705925445435	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGAGTTGTGTTTTTT	-33471499	True	NA	NA	False	TATAAA	-2	NA	33473146	33370823	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_33372805_33388962_33389799_33453215_33453511_33461371_33461726_33473063
transcript_187997.known	chr8	-	1623	4	FSM	ENSG00000172728.16	ENST00000520767.5	1623	4	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	18.7794213613377	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTCTGTTGTTGCCAC	-33471487	True	NA	NA	False	NA	NA	NA	33473134	33388895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_33389799_33453215_33453511_33461371_33461726_33473063
transcript_187998.known	chr8	-	2187	3	FSM	ENSG00000172728.16	ENST00000416169.5	2187	3	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	11.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATCCAGTCTTGGGTA	-33471466	True	NA	NA	False	ATTAAA	-15	NA	33473113	33451727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_33453511_33461371_33461726_33473063
transcript_18800.nic	chr1	+	5069	21	NIC	ENSG00000266028.8	novel	6884	23	NA	NA	-41	0	intron_retention	FALSE	canonical	2	11	junction_20	66.7299595384262	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAGGTTTCCCAGATCTC	206199352	True	NA	7	True	AATAAA	-24	NA	206203499	206456159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_206203651_206205428_206206038_206303280_206303474_206342845_206343009_206384013_206384077_206392688_206392905_206393544_206393674_206401420_206401646_206405248_206405351_206406376_206406575_206415888_206415974_206419372_206419401_206421249_206421275_206430161_206430223_206436964_206437043_206437963_206438099_206439975_206440082_206446074_206446300_206450385_206450466_206453199_206453381_206454143
transcript_188003.known	chr8	+	3561	10	FSM	ENSG00000198042.11	ENST00000360128.11	3561	10	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_1	27.4307208152546	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCGTGACTGGGAGAAAAAA	33477070	True	NA	27	True	AATAAA	-18	NA	33485181	33501262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_33485222_33488377_33488428_33488519_33488630_33488733_33488799_33488987_33489140_33490284_33490340_33495541_33495617_33496624_33496742_33497231_33497298_33498431
transcript_188010.known	chr8	+	872	9	FSM	ENSG00000198042.11	ENST00000518389.1	872	9	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_5	106.510489506903	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCCAGGACTGAACATGC	33477088	True	NA	NA	False	NA	NA	NA	33485199	33498646	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_33485222_33488377_33488428_33488519_33488630_33488733_33488799_33488987_33489140_33495541_33495617_33496624_33496742_33497231_33497298_33498431
transcript_188013.known	chr8	-	2131	8	FSM	ENSG00000129696.13	ENST00000431156.7	2131	8	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_7	80.3416175478443	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAAACTGGAGGTGTGTA	-33510830	True	NA	-5	True	AATAAA	-35	NA	33513135	33498721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_33499278_33500327_33500491_33503428_33503573_33503747_33503936_33507228_33507322_33509745_33509933_33511966_33512713_33513081
transcript_188016.known	chr8	-	2242	7	FSM	ENSG00000129696.13	ENST00000360742.9	2242	7	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_4	42.3936578065897	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAAGTAATGTAGCATTT	-33510804	True	NA	-4	True	AATAAA	-19	NA	33513109	33498953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_33499278_33500327_33500491_33503428_33503573_33503747_33503936_33507228_33507322_33509745_33509933_33511966
transcript_188026.known	chr8	-	1588	6	FSM	ENSG00000129696.13	ENST00000520636.5	1588	6	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_4	109.806375042618	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGGAGTTATTTAAGAAAA	-33510407	False	NA	-50	True	NA	NA	NA	33512712	33499117	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_33499278_33500327_33500491_33503428_33503573_33503747_33503936_33509745_33509933_33511966
transcript_188031.known	chr8	-	1872	6	FSM	ENSG00000133874.2	ENST00000256257.2	1872	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	4.92341345003647	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGCTTGTGGTTGTGGC	-33564286	True	NA	-1	True	AATAAA	-26	NA	33567128	33547753	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_33548868_33549409_33549493_33551043_33551086_33551343_33551390_33558614_33558772_33566698
transcript_188033.known	chr8	-	1754	4	FSM	ENSG00000133878.9	ENST00000256261.9	1754	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	10.6144555520604	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTTTCTTGAAGTCATT	NA	False	NA	-1	True	AATAAA	-16	NA	33600023	33591329	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_33592213_33593532_33593748_33597294_33597592_33599664
transcript_188041.known	chr8	+	2262	1	FSM	ENSG00000279099.1	ENST00000623193.1	2262	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAACTAAA	NA	False	NA	NA	False	TATAAA	-24	NA	35254343	35256605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_35254300_35256600
transcript_188042.known	chr8	+	5387	12	FSM	ENSG00000147475.17	ENST00000519638.3	5387	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	11.6107673026106	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGCATACGAAGGGCTTT	37731475	True	NA	NA	False	AATAAA	-25	NA	37736633	37758422	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_37736679_37737907_37738030_37740364_37740447_37741771_37741819_37744354_37744417_37744570_37744697_37749558_37749633_37749793_37749853_37750394_37750487_37751625_37751716_37753449_37753530_37753914
transcript_188046.known	chr8	+	1466	7	FSM	ENSG00000147475.17	ENST00000648919.1	1466	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	8.20568908339411	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTTGTTTATCTCACTA	37731475	True	NA	NA	False	AGTAAA	-15	NA	37736633	37746550	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_37736679_37737907_37738030_37740364_37740447_37741771_37741819_37744354_37744417_37744570_37744697_37745568
transcript_188051.known	chr8	+	2507	8	FSM	ENSG00000147471.12	ENST00000328195.8	2507	8	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_7	73.976554476705	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTGACTGAATA	37754276	True	NA	17	True	ATTAAA	-18	NA	37762644	37779768	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_37762759_37765525_37765634_37765710_37765747_37766279_37766356_37772754_37772890_37775338_37775482_37775917_37776017_37777972
transcript_188057.known	chr8	+	559	5	FSM	ENSG00000147471.12	ENST00000523994.1	559	5	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_4	167.847400933109	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAGTAAGTATAGTAAAG	37754286	True	NA	NA	False	AATAAA	-28	NA	37762654	37766716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_37762759_37765525_37765634_37765710_37765747_37766279_37766356_37766481
transcript_188061.known	chr8	+	770	4	FSM	ENSG00000147471.12	ENST00000520073.5	770	4	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_1	28.7672653471886	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAGAATTATAGTAAAGTA	37754226	True	NA	NA	False	AATAAA	-36	NA	37762594	37766741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_37762759_37765525_37765634_37765710_37765747_37766279
transcript_188064.known	chr8	+	516	5	FSM	ENSG00000147471.12	ENST00000523358.5	516	5	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_4	62.88083968905	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAACCAGACCTGAATTG	37754231	True	NA	NA	False	NA	NA	NA	37762599	37772891	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_37762759_37765525_37765634_37765710_37765747_37766279_37766356_37772754
transcript_188066.known	chr8	-	1192	5	FSM	ENSG00000104221.13	ENST00000520601.5	1192	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	52.7967802048572	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGGCCAGTCCTGCCCTT	-37847595	True	NA	NA	False	NA	NA	NA	37849838	37844701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_37845214_37845685_37845775_37846853_37847176_37848595_37848656_37849629
transcript_188069.known	chr8	-	2560	4	FSM	ENSG00000104221.13	ENST00000220659.11	2560	4	0	0	0	0	multi-exon	TRUE	canonical	3	104	junction_3	6.34209919681348	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTAGGGAGATGGGTCTT	-37847618	True	NA	NA	False	NA	NA	NA	37849861	37843267	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_37845214_37846853_37847176_37848595_37848656_37849629
transcript_188072.known	chr8	-	8185	6	FSM	ENSG00000156675.16	ENST00000330843.9	8185	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	40.4623281584241	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCCCACCCCCACCACAC	-37893701	True	NA	NA	False	NA	NA	NA	37899497	37858617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_37863114_37870419_37870529_37871277_37873180_37874514_37875323_37877108_37877552_37899070
transcript_188073.known	chr8	-	6253	5	FSM	ENSG00000156675.16	ENST00000287263.8	6253	5	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	10.4731800328267	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCCCACCCCCACCACAC	-37893671	True	NA	NA	False	NA	NA	NA	37899467	37858617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_37863114_37870419_37870529_37874514_37875323_37877108_37877552_37899070
transcript_188075.known	chr8	-	2585	2	FSM	ENSG00000188778.6	ENST00000345060.5	2585	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTTGATGCAGTTTTCT	NA	False	NA	NA	False	AGTAAA	-20	NA	37966599	37962989	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_37964240_37965264
transcript_188077.known	chr8	+	827	3	FSM	ENSG00000187840.5	ENST00000338825.5	827	3	0	0	0	0	multi-exon	FALSE	canonical	3	2884	junction_1	59.5	1470	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGCCCCGTCTGAGCTT	38006138	True	NA	19	True	AATAAA	-26	NA	38030533	38060365	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_38030719_38057080_38057261_38059903
transcript_188081.known	chr8	+	2918	16	FSM	ENSG00000129691.16	ENST00000343823.11	2918	16	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_1	32.1890250447778	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGCTCACGCCTGTAATC	38097796	True	NA	NA	False	ATTAAA	-38	NA	38105528	38140080	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_38105739_38106377_38106445_38107020_38107167_38110378_38110468_38110738_38110834_38114191_38114288_38114904_38115001_38116649_38116726_38119269_38119364_38120931_38121150_38128290_38128459_38128757_38128952_38133453_38133547_38135667_38135767_38138815_38138876_38138963
transcript_188088.known	chr8	+	2678	16	FSM	ENSG00000129691.16	ENST00000428278.6	2678	16	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	85.5473877775093	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACACTTTGCTTCCCTT	38098060	False	NA	8	True	AATAAA	-18	NA	38105792	38139703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_38106140_38106377_38106445_38107020_38107167_38110378_38110468_38110738_38110834_38114191_38114288_38114904_38115001_38116649_38116726_38119269_38119364_38120931_38121150_38128290_38128459_38128757_38128952_38133453_38133547_38135667_38135767_38138815_38138876_38138963
transcript_188089.nic	chr8	+	2442	15	NIC	ENSG00000129691.16	novel	2918	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_13	101.356312288956	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACACTTTGCTTCCCTT	38097796	True	NA	8	True	AATAAA	-18	NA	38105528	38139703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_38105739_38106377_38106445_38107020_38107167_38110378_38110468_38110738_38110834_38114191_38114288_38114904_38115001_38116649_38116726_38119269_38119364_38120931_38121150_38128290_38128459_38128757_38128952_38133453_38133547_38138815_38138876_38138963
transcript_188092.known	chr8	+	2433	15	FSM	ENSG00000129691.16	ENST00000521652.5	2433	15	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_13	126.874777570932	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACACTTTGCTTCCCTT	38104969	False	NA	8	True	AATAAA	-18	NA	38105938	38139703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_38106140_38106377_38106445_38107020_38107167_38110378_38110468_38110738_38110834_38114191_38114288_38114904_38115001_38116649_38116726_38119269_38119364_38120931_38121150_38128290_38128459_38128757_38128952_38133453_38133547_38138815_38138876_38138963
transcript_188099.known	chr8	-	2565	7	FSM	ENSG00000147465.12	ENST00000276449.9	2565	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	5.39804491356722	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGAGCTGGGCGTGGTG	-38150857	False	NA	NA	False	ACTAAA	-6	NA	38150952	38142699	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38144387_38145221_38145316_38145962_38146148_38146288_38146448_38148199_38148328_38148640_38148755_38150754
transcript_188102.known	chr8	+	4197	5	FSM	ENSG00000156735.11	ENST00000287322.5	4197	5	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_2	34.1933838629639	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTTTTTTTTTTTTTAT	38167893	True	NA	NA	False	AATAAA	-30	NA	38176854	38213301	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_38177140_38192687_38192796_38207511_38207767_38209012_38209268_38210007
transcript_188109.known	chr8	+	1943	4	FSM	ENSG00000156735.11	ENST00000432471.6	1943	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	85.7956227839678	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCACATTTTTGTACAT	38176317	False	NA	NA	False	TTTAAA	-12	NA	38176587	38210888	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_38177140_38207511_38207767_38209012_38209268_38210007
transcript_188113.known	chr8	-	1568	4	FSM	ENSG00000175324.10	ENST00000522515.5	1568	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	277.860076697287	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAATATGAATCTCAAAA	-38175542	True	NA	-36	True	NA	NA	NA	38176716	38163358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38163841_38169801_38169918_38171964_38172034_38175815
transcript_188114.known	chr8	-	906	4	FSM	ENSG00000175324.10	ENST00000311351.9	906	4	0	0	0	0	multi-exon	FALSE	canonical	3	576	junction_1	29.3295452099452	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCATGTTATTTCCAAGT	-38170547	True	NA	-16	True	AATAAA	-16	NA	38176493	38163338	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38163841_38169801_38169918_38171964_38172034_38176274
transcript_188116.known	chr8	-	776	4	FSM	ENSG00000175324.10	ENST00000520286.5	776	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	264.670864786184	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTTCTTTATATTGTTC	-38175556	True	NA	-105	True	AAGAAA	-42	NA	38176730	38163427	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38163841_38169801_38169918_38171964_38172034_38176552
transcript_188118.known	chr8	-	975	3	FSM	ENSG00000175324.10	ENST00000520755.5	975	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	293.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTATTTCCAAGTTTGA	-38175500	False	NA	-12	True	AATAAA	-20	NA	38176674	38163334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38163841_38171964_38172034_38176274
transcript_188121.known	chr8	-	3995	10	FSM	ENSG00000147548.17	ENST00000316985.7	3995	10	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	31.177310521564	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTGTGTTGGGTTTTAT	-38377947	True	NA	-1	True	AATAAA	-41	NA	38382272	38316416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38318039_38318894_38318941_38321071_38321173_38326729_38326857_38329377_38329894_38331430_38331586_38337304_38337468_38338535_38338608_38347496_38348216_38381798
transcript_188124.known	chr8	-	577	3	FSM	ENSG00000147548.17	ENST00000534155.1	577	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACATCCGTCAGGAGGAT	-38377902	True	NA	NA	False	NA	NA	NA	38382227	38348095	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38348216_38363872_38363901_38381798
transcript_188125.nic	chr8	-	1138	2	ISM	ENSG00000147548.17	ENST00000316985.7	3995	10	-22	31157	-22	522	5prime_fragment	FALSE	canonical	3	272	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAACAAGCATGACTCATCA	-38377969	True	NA	24	True	AAGAAA	-13	NA	38382294	38347573	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_38348216_38381798
transcript_188126.known	chr8	+	4682	18	FSM	ENSG00000085788.14	ENST00000397166.7	4682	18	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	9.7466168382874	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCTGTCTTTATGTAT	38231018	True	NA	84	True	AAGAAA	-17	NA	38231584	38262836	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_38231860_38232986_38233215_38234393_38234585_38237537_38237628_38238088_38238210_38240274_38240365_38242249_38242386_38245741_38245951_38246232_38246301_38247712_38247836_38249707_38249804_38251911_38252029_38252131_38252288_38252721_38252825_38252956_38253128_38253555_38253719_38260039_38260148_38260599
transcript_188136.known	chr8	-	831	7	FSM	ENSG00000147535.17	ENST00000524616.5	831	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	251.201556966159	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCAACATGGTGAACCCT	-38263495	True	NA	NA	False	NA	NA	NA	38269196	38264350	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38264605_38266140_38266312_38267266_38267392_38267896_38267961_38268370_38268408_38268881_38268991_38269125
transcript_188138.known	chr8	-	875	7	FSM	ENSG00000147535.17	ENST00000531823.5	875	7	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_5	252.793503784325	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGGGAGGCTGAGGAGG	-38263473	True	NA	NA	False	NA	NA	NA	38269174	38264397	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38264605_38266140_38266312_38267266_38267392_38267896_38267961_38268370_38268462_38268822_38268991_38269125
transcript_188141.known	chr8	-	2134	7	FSM	ENSG00000147535.17	ENST00000424479.7	2134	7	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	177.161335761754	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTAAATGTGTGCTTTTTT	-38263523	True	NA	-10	True	AATAAA	-2	NA	38269224	38263129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38264605_38266140_38266312_38267266_38267392_38267896_38267961_38268370_38268462_38268881_38268991_38269125
transcript_188143.nic	chr8	-	922	7	NIC	ENSG00000147535.17	novel	2134	7	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	236.910496460865	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAATGGTAAATGTGT	-38263517	True	NA	-18	True	AGTAAA	-11	NA	38269218	38263137	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_38263407_38266140_38266312_38267266_38267392_38267896_38267961_38268370_38268462_38268881_38268991_38269125
transcript_18815.known	chr1	-	2364	4	FSM	ENSG00000196550.11	ENST00000367128.8	2364	4	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	86.9495383669299	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGGCTAATGTTTATTG	NA	False	NA	NA	False	AATAAA	-20	NA	206202839	206186178	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_206187374_206195751_206195877_206199806_206199885_206201873
transcript_188153.known	chr8	-	853	7	FSM	ENSG00000147535.17	ENST00000422581.6	853	7	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	222.755783064972	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAAGTCTGGAATTGAGG	-38263506	True	NA	-6	True	AATAAA	-18	NA	38269207	38264738	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38264950_38266140_38266312_38267266_38267392_38267896_38267961_38268370_38268462_38268881_38268991_38269125
transcript_188155.known	chr8	-	581	6	FSM	ENSG00000147535.17	ENST00000531109.5	581	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	258.153442742877	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCTCTGACTGATGCAGA	-38263474	True	NA	NA	False	NA	NA	NA	38269175	38264542	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38264605_38266140_38266312_38267266_38267392_38267896_38267961_38268881_38268991_38269125
transcript_188168.known	chr8	+	1668	5	FSM	ENSG00000085788.14	ENST00000519857.5	1668	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	13.9709520076479	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGTTATTTAGAAATAAAAA	38231104	False	NA	NA	False	NA	NA	NA	38231670	38239058	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_38231860_38232986_38233215_38234393_38234585_38237537_38237628_38238088
transcript_18817.known	chr1	-	1774	4	FSM	ENSG00000196550.11	ENST00000341209.9	1774	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	110.882320001382	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCTTCCTTTAATTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	206202446	206186255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_206187374_206195751_206195877_206199806_206199885_206201993
transcript_188179.known	chr8	-	794	5	FSM	ENSG00000147535.17	ENST00000419686.2	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	521	junction_3	97.3354380480203	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTATGTGTCAGGTACT	-38263542	True	NA	-6	True	AATAAA	-18	NA	38269243	38266979	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38267392_38267896_38267961_38268370_38268462_38268881_38268991_38269125
transcript_188181.known	chr8	+	600	4	FSM	ENSG00000085788.14	ENST00000528358.5	600	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	20.6074420214316	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAATCCAAAGGTAAAACAA	38231738	True	NA	NA	False	AAAAAG	-38	NA	38231751	38237616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_38231860_38232986_38233215_38234399_38234585_38237537
transcript_188189.known	chr8	-	1590	3	FSM	ENSG00000147535.17	ENST00000528814.1	1590	3	0	0	0	0	multi-exon	FALSE	canonical	3	584	junction_2	96	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATACCTTTAACGAAG	-38263529	True	NA	-27	True	NA	NA	NA	38269230	38267000	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38267392_38267896_38268991_38269125
transcript_188190.nic	chr8	-	2133	2	NIC	ENSG00000147535.17	novel	1590	3	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	584	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTCTATGTGTCAGGTA	-38263548	True	NA	-8	True	AATAAA	-16	NA	38269249	38266981	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_38268991_38269125
transcript_188191.known	chr8	-	2185	6	FSM	ENSG00000147535.17	ENST00000529359.5	2185	6	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	189.884596531683	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTAAATGTGTGCTTTTTT	-38263439	True	NA	-10	True	AATAAA	-2	NA	38269140	38263129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38264605_38266140_38266312_38267266_38267392_38267896_38267961_38268370_38268462_38268881
transcript_18820.known	chr1	+	3240	22	FSM	ENSG00000263528.8	ENST00000581977.7	3240	22	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_21	8.64990529878822	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGGCTCTCCCTGGGC	206469984	True	NA	20	True	AATAAA	-20	NA	206470475	206496889	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_206470699_206471155_206471246_206473195_206473315_206474330_206474472_206474864_206474995_206476180_206476363_206476677_206476839_206477748_206477860_206478159_206478340_206478942_206479134_206479869_206479935_206480021_206480114_206480446_206480534_206484996_206485073_206485193_206485307_206487913_206487991_206490818_206490859_206491647_206491750_206493022_206493120_206493265_206493379_206493919_206493992_206496111
transcript_188205.known	chr8	-	4157	19	FSM	ENSG00000077782.22	ENST00000335922.9	4157	19	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_17	295.447541875034	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATCTATGGGCTGTATG	-38458299	True	NA	-8	True	AATAAA	-16	NA	38468621	38412730	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38413805_38413917_38414024_38414151_38414290_38414558_38414630_38414778_38414902_38415869_38416061_38417305_38417417_38417869_38417992_38418227_38418374_38419538_38419736_38421796_38421942_38424508_38424700_38426121_38426246_38427920_38428094_38428345_38428436_38429681_38429949_38440305_38440374_38457355_38457535_38467980
transcript_188207.known	chr8	-	5002	19	FSM	ENSG00000077782.22	ENST00000674380.1	5002	19	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_9	311.173788329303	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACTAGGAAATGAATTTT	-38468122	False	237	14	True	TTTAAA	-21	NA	38468132	38411430	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38413805_38413917_38414024_38414151_38414290_38414558_38414630_38414778_38414902_38415869_38416061_38417305_38417417_38417869_38417992_38418227_38418374_38419532_38419736_38421796_38421942_38424508_38424700_38426121_38426246_38427920_38428094_38428345_38428436_38429681_38429949_38443396_38443493_38457355_38457535_38467980
transcript_188227.known	chr8	-	4442	18	FSM	ENSG00000077782.22	ENST00000341462.9	4442	18	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	239.219202802826	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTGAGAGAAAATGAAATGG	-38458279	True	NA	-5	True	AATAAA	-16	NA	38468601	38411142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38412596_38413917_38414024_38414151_38414290_38414558_38414630_38414778_38414902_38415869_38416061_38417305_38417417_38417869_38417992_38418227_38418374_38419538_38419736_38421796_38421942_38424508_38424700_38426121_38426246_38427920_38428094_38428351_38428436_38429681_38429949_38457355_38457535_38467980
transcript_188235.known	chr8	-	3680	18	FSM	ENSG00000077782.22	ENST00000397113.6	3680	18	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_9	272.095024618506	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTATGGGCTGTATGAAA	-38467890	False	NA	-5	True	AATAAA	-19	NA	38467900	38412727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38413805_38413917_38414024_38414151_38414290_38414558_38414630_38414778_38414902_38415869_38416061_38417305_38417417_38417869_38417992_38418227_38418374_38419532_38419736_38421796_38421942_38424508_38424700_38426121_38426246_38427920_38428094_38428351_38428436_38429681_38429949_38457355_38457535_38467671
transcript_188236.known	chr8	-	4094	18	FSM	ENSG00000077782.22	ENST00000683815.1	4094	18	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_9	192.559558035958	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTATCTATGGGCTGTAT	-38458311	True	NA	-9	True	AATAAA	-15	NA	38468633	38412731	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38413805_38413917_38414024_38414151_38414290_38414558_38414630_38414778_38414902_38415869_38416061_38417305_38417417_38417869_38417992_38418227_38418374_38419538_38419736_38421796_38421942_38424508_38424700_38426121_38426246_38427920_38428094_38428351_38428436_38429681_38429949_38457355_38457535_38467980
transcript_188238.known	chr8	-	4711	18	FSM	ENSG00000077782.22	ENST00000674474.1	4711	18	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_9	280.356656192216	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGCTATATATTAAAAACAAA	-38468142	False	NA	76	True	NA	NA	NA	38468152	38412879	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38413805_38413917_38414024_38414151_38414290_38414558_38414630_38414778_38414902_38415869_38416061_38417305_38417417_38417869_38417992_38418227_38418374_38419532_38419736_38421796_38423176_38424508_38424700_38426121_38426246_38427920_38428094_38428345_38428436_38429681_38429949_38457355_38457535_38467980
transcript_18824.known	chr1	+	2493	21	FSM	ENSG00000263528.8	ENST00000578328.6	2493	21	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_19	9.9674470151589	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGATGTCGCCAGCATTAC	206470003	True	NA	NA	False	NA	NA	NA	206470494	206496274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_206470699_206471155_206471246_206473195_206473315_206474330_206474472_206474864_206474995_206476180_206476363_206476677_206476839_206477748_206477860_206478159_206478340_206478942_206479134_206479869_206479935_206480021_206480114_206480446_206480534_206484996_206485073_206485193_206485307_206487913_206487991_206490818_206490859_206491647_206491750_206493022_206493120_206493919_206493992_206496111
transcript_18826.known	chr1	+	2487	21	FSM	ENSG00000263528.8	ENST00000584998.5	2487	21	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	8.7	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGATGTCGCCAGCATTAC	206470003	True	NA	NA	False	NA	NA	NA	206470494	206496274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_206470699_206471155_206471246_206474330_206474472_206474864_206474995_206476180_206476363_206476677_206476839_206477748_206477860_206478159_206478340_206478942_206479134_206479869_206479935_206480021_206480114_206480446_206480534_206484996_206485073_206485193_206485307_206487913_206487991_206490818_206490859_206491647_206491750_206493022_206493120_206493265_206493379_206493919_206493992_206496111
transcript_188260.known	chr8	-	3827	17	FSM	ENSG00000077782.22	ENST00000684654.1	3827	17	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_15	258.338554214716	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTATCTATGGGCTGTAT	-38458311	True	NA	-9	True	AATAAA	-15	NA	38468633	38412731	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38413805_38413917_38414024_38414151_38414290_38414558_38414630_38414778_38414902_38415869_38416061_38417305_38417417_38417869_38417992_38418227_38418374_38419538_38419736_38421796_38421942_38424508_38424700_38426121_38426246_38427920_38428094_38428351_38428436_38457355_38457535_38467980
transcript_188287.known	chr8	-	2427	7	FSM	ENSG00000077782.22	ENST00000683795.1	2427	7	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_3	168.935885274069	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGGTTAAACACAAATAGAA	-38458279	True	NA	NA	False	NA	NA	NA	38468601	38423726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38424700_38426121_38426246_38427920_38428094_38428345_38428436_38429681_38429949_38457355_38457535_38467980
transcript_188288.known	chr8	-	1898	6	FSM	ENSG00000077782.22	ENST00000496296.5	1898	6	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_4	255.804143828829	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCCTTTTTCCTCTCAC	-38458313	True	NA	NA	False	TATAAA	-36	NA	38468635	38424016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38424700_38426121_38426246_38427920_38428094_38428351_38428436_38457355_38457535_38467980
transcript_188289.known	chr8	-	2714	6	FSM	ENSG00000077782.22	ENST00000683276.1	2714	6	0	0	0	0	multi-exon	FALSE	canonical	3	601	junction_5	41.7784633513489	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGATTCTTTTTTTTTTTT	-38458279	True	NA	NA	False	AATAGA	-17	NA	38468601	38423691	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38424700_38426121_38426246_38427920_38428436_38429681_38429949_38457355_38457535_38467980
transcript_188297.nic	chr8	-	1543	5	ISM	ENSG00000077782.22	ENST00000683815.1	4094	18	-329	15331	-128	-51	5prime_fragment	FALSE	canonical	3	406	junction_1	107.588045339619	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGGAAAAGAAATTGCATG	NA	False	NA	4	True	NA	NA	NA	38468962	38428062	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_38428094_38428351_38428436_38429681_38429949_38457355_38457535_38467980
transcript_188300.known	chr8	+	2240	3	FSM	ENSG00000165046.13	ENST00000519476.6	2240	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATACTTTAGGGTCCAC	38386292	False	NA	17	True	ATTAAA	-30	NA	38386302	38394434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_38386569_38387949_38388031_38392541
transcript_188310.known	chr8	-	1318	1	FSM	ENSG00000239218.2	ENST00000488192.1	1318	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGCA	-38435619	False	NA	NA	False	AATAAA	-19	NA	38435664	38434346	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38434300_38435700
transcript_188317.nic	chr8	+	2876	13	NIC	ENSG00000147526.20	novel	7770	13	NA	NA	-79	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	19.2055764471329	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACATGCCTACTGCTGCCT	38785314	True	NA	NA	False	NA	NA	NA	38787156	38848142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_38787744_38788703_38788820_38819521_38820636_38825307_38825369_38827167_38827289_38831124_38831178_38836161_38836288_38838469_38838547_38840223_38840268_38842286_38842448_38843288_38843396_38846698_38846820_38847954
transcript_188320.nic	chr8	+	5527	13	NIC	ENSG00000147526.20	novel	7770	13	NA	NA	-79	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	19.2055764471329	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAACCAGGAGTGAAAA	38785314	True	NA	NA	False	NA	NA	NA	38787156	38850793	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_38787744_38788703_38788820_38819521_38820636_38825307_38825369_38827167_38827289_38831124_38831178_38836161_38836288_38838469_38838547_38840223_38840268_38842286_38842448_38843288_38843396_38846698_38846820_38847954
transcript_188321.known	chr8	+	7770	13	FSM	ENSG00000147526.20	ENST00000317827.9	7770	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	20.3203510468364	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGGGGGTGTGTGTGGT	38785393	True	NA	6	True	AATAAA	-19	NA	38787235	38853028	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_38787744_38788703_38788820_38819521_38820636_38825307_38825369_38827167_38827376_38831124_38831178_38836161_38836288_38838469_38838547_38840223_38840268_38842286_38842448_38843288_38843396_38846698_38846820_38847954
transcript_188327.known	chr8	+	6513	11	FSM	ENSG00000147526.20	ENST00000276520.12	6513	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	21.4011681924142	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGGGGGTGTGTGTGGT	38785420	True	NA	6	True	AATAAA	-19	NA	38787262	38853028	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_38787744_38825307_38825369_38827167_38827376_38831124_38831178_38836161_38836288_38838469_38838547_38840223_38840268_38842286_38842448_38843288_38843396_38846698_38846820_38847954
transcript_188333.known	chr8	+	1724	7	FSM	ENSG00000147526.20	ENST00000522904.5	1724	7	0	0	0	0	multi-exon	TRUE	canonical	3	5	junction_1	15.6356075104942	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCTCCTGTTTAGTCTG	38757057	True	NA	NA	False	NA	NA	NA	38757280	38836291	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_38757410_38788703_38788820_38819521_38820636_38825307_38825369_38827167_38827289_38831124_38831178_38836161
transcript_188340.known	chr8	+	4264	23	FSM	ENSG00000168615.13	ENST00000676669.1	4264	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	49.2506659769546	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGTCCATCGTTTCATT	38992454	True	NA	NA	False	ATTAAA	-20	NA	38996913	39105261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_38997161_39007885_39007984_39011657_39011717_39013964_39014044_39016117_39016195_39017218_39017415_39018852_39018919_39021642_39021715_39023155_39023326_39025802_39025885_39026676_39026811_39041945_39042118_39054480_39054574_39055576_39055773_39071297_39071404_39077227_39077412_39082640_39082722_39082967_39083074_39090046_39090189_39091258_39091347_39091671_39091765_39101862_39101931_39103606
transcript_188341.known	chr8	+	4112	22	FSM	ENSG00000168615.13	ENST00000487273.7	4112	22	0	0	0	0	multi-exon	FALSE	canonical	1	56	junction_18	27.4217087975692	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGTCCATCGTTTCATT	38992513	True	NA	NA	False	ATTAAA	-20	NA	38996972	39105261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_38997161_39007885_39007984_39011657_39011717_39013964_39014044_39016117_39016195_39017218_39017415_39018852_39018919_39021642_39021715_39023155_39023326_39025802_39025885_39026676_39026811_39041945_39042118_39054480_39054574_39055576_39055773_39071297_39071404_39077227_39077412_39082640_39082722_39082967_39083074_39090046_39090189_39091258_39091347_39101862_39101931_39103606
transcript_188344.known	chr8	+	4183	21	FSM	ENSG00000168615.13	ENST00000677908.1	4183	21	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	41.3612137152671	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTTAAGTTTTTAAAAAGA	38992454	True	NA	NA	False	ATTAAA	-21	NA	38996913	39105445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_38997161_39007885_39007984_39011657_39011717_39013964_39014044_39016117_39016195_39017218_39017415_39018852_39018919_39021642_39021715_39023155_39023326_39025802_39025885_39026676_39026811_39054480_39054574_39055576_39055773_39071297_39071404_39077227_39077412_39082640_39082722_39082967_39083074_39090046_39090189_39091258_39091347_39101862_39101931_39103606
transcript_188346.known	chr8	+	3894	22	FSM	ENSG00000168615.13	ENST00000677359.1	3894	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	40.7923228738224	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATTTACAATAAATAAAAT	38992454	True	NA	-24	True	AATACA	-1	NA	38996913	39104968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_38997161_39007885_39007984_39011657_39011717_39013964_39014044_39016117_39016195_39017218_39017415_39018852_39018919_39021642_39021715_39023155_39023326_39025802_39025885_39026676_39026811_39041945_39042118_39054480_39054574_39055576_39055773_39071297_39071404_39077227_39077412_39082640_39082722_39082967_39083074_39090046_39090189_39091242_39091347_39101862_39101931_39103606
transcript_188347.known	chr8	+	2387	4	FSM	ENSG00000168615.13	ENST00000481513.5	2387	4	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	13.9124245031395	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGACTGGCCTAAAGTAAT	38992526	True	NA	NA	False	AATAAA	-18	NA	38996985	39016019	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_38997161_39007885_39007984_39011657_39011717_39013964
transcript_188348.known	chr8	-	3239	4	FSM	ENSG00000169490.17	ENST00000456397.7	3239	4	0	0	0	0	multi-exon	FALSE	canonical	3	454	junction_3	77.6831169989121	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGGCACTGTGTTCTT	-38986744	True	NA	0	True	AATAAA	-21	NA	38996509	38988807	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38991546_38993544_38993661_38995317_38995406_38996212
transcript_188349.known	chr8	-	469	4	FSM	ENSG00000169490.17	ENST00000522434.5	469	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	271.825107171668	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCCAAGTGATGGCAGCA	-38986744	True	NA	NA	False	NA	NA	NA	38996509	38991371	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38991546_38993544_38993661_38995317_38995406_38996418
transcript_188350.known	chr8	-	1631	4	FSM	ENSG00000169490.17	ENST00000397070.6	1631	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	264.30453815417	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTGTATGAGTATTTTC	-38986744	True	NA	-8	True	AATAAA	-15	NA	38996509	38990804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38991546_38993544_38993661_38995317_38995795_38996212
transcript_188356.known	chr8	-	3295	4	FSM	ENSG00000169490.17	ENST00000456845.6	3295	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	284.51869690565	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGGCACTGTGTTCTT	-38986718	True	NA	0	True	AATAAA	-21	NA	38996483	38988807	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_38991546_38993544_38993661_38995317_38995694_38996418
transcript_188367.nnic	chr8	+	1636	11	NIC	ENSG00000131203.13	novel	1709	12	NA	NA	29	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	65.173921164834	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGCATAAGATATATT	39901444	True	NA	12	True	AATAAA	-17	NA	39902303	39928426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_39902449_39913888_39914010_39917874_39917971_39918087_39918208_39918814_39918934_39920099_39920115_39922551_39922652_39923468_39923591_39924720_39924773_39925222_39925372_39927829
transcript_188368.nnic	chr8	+	2000	11	NIC	ENSG00000131203.13	novel	1709	12	NA	NA	29	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	65.173921164834	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTTGCTTCATTTATA	39901444	True	NA	NA	False	AATAAA	-21	NA	39902303	39928790	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_39902449_39913888_39914010_39917874_39917971_39918087_39918208_39918814_39918934_39920099_39920115_39922551_39922652_39923468_39923591_39924720_39924773_39925222_39925372_39927829
transcript_188375.nnic	chr8	+	403	4	NNC	ENSG00000131203.13	novel	612	5	NA	NA	29	-2208	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_3	94.9818696149721	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTATCATGGGTTTTGT	39901444	True	NA	NA	False	AATAAA	-26	NA	39902303	39915721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_39902449_39913888_39914010_39914193_39914246_39915636
transcript_188381.known	chr8	-	2471	7	FSM	ENSG00000165061.15	ENST00000297737.11	2471	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	9.62635271879577	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTTCAGTTTGGGTTT	-40895719	True	NA	NA	False	AGTAAA	-20	NA	40897826	40530589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_40532239_40581164_40581262_40674703_40674932_40697244_40697402_40767640_40767731_40825574_40825681_40897682
transcript_188383.known	chr8	-	2250	6	FSM	ENSG00000165061.15	ENST00000315769.11	2250	6	0	0	0	0	multi-exon	TRUE	canonical	1	6	junction_2	15.5897402159241	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTTCAGTTTGGGTTT	-40895726	True	NA	NA	False	AGTAAA	-20	NA	40897833	40530589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_40532239_40581164_40581262_40697244_40697402_40767640_40767731_40825574_40825681_40897682
transcript_18839.known	chr1	+	678	5	FSM	ENSG00000263528.8	ENST00000579827.6	678	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	9.28372231381357	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAATGTTCACAGCAGCA	206470150	False	NA	3	True	ATTAAA	-17	NA	206470641	206475135	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_206470699_206471155_206471246_206473195_206473315_206474330_206474472_206474864
transcript_188391.known	chr8	-	564	5	FSM	ENSG00000165061.15	ENST00000523188.5	564	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	22.0737400546441	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGACCCCATTAAAGAC	-40895717	True	NA	NA	False	NA	NA	NA	40897824	40697269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_40697402_40767640_40767731_40786688_40786783_40825574_40825681_40897682
transcript_188392.known	chr8	-	515	5	FSM	ENSG00000165061.15	ENST00000523542.5	515	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	24.2525771826418	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGAGAAGACCCCATTAA	-40895703	True	NA	NA	False	NA	NA	NA	40897810	40697273	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_40697402_40767640_40767731_40808508_40808572_40825574_40825681_40897682
transcript_188393.nic	chr8	-	2016	4	ISM	ENSG00000165061.15	ENST00000315769.11	2250	6	-36	165179	-36	1227	5prime_fragment	FALSE	canonical	3	38	junction_2	4.96655480858378	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCCACATGGCAAAACCAG	-40895762	True	NA	NA	False	NA	NA	NA	40897869	40695768	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_40697402_40767640_40767731_40825574_40825681_40897682
transcript_188399.known	chr8	-	4464	3	FSM	ENSG00000104332.12	ENST00000220772.8	4464	3	0	0	0	0	multi-exon	FALSE	canonical	3	548	junction_1	22.5	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATACTGTGAGCTGTGACT	-41295946	True	NA	-17	True	ACTAAA	-18	NA	41309473	41261961	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_41265490_41303460_41303539_41308615
transcript_188410.nic	chr8	-	997	2	ISM	ENSG00000104332.12	ENST00000220772.8	4464	3	-61	41499	-61	-41497	5prime_fragment	FALSE	canonical	3	593	junction_1	0	1307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAAAGCGTTTCTAGCT	-41309490	False	NA	NA	False	NA	NA	NA	41309534	41303460	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_41303539_41308615
transcript_188432.known	chr8	+	6298	13	FSM	ENSG00000158669.11	ENST00000396987.7	6298	13	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_2	27.7648858972784	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTCTTTGATTTATTAAA	41573831	True	NA	NA	False	AATAAA	-17	NA	41578199	41625001	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_41578279_41598291_41599305_41609415_41609486_41609654_41609956_41610735_41610811_41611902_41611993_41612179_41612274_41612844_41612961_41614385_41614442_41614962_41615049_41618683_41618813_41618897_41618978_41620892
transcript_188437.nic	chr8	+	3446	13	NIC	ENSG00000158669.11	novel	6298	13	NA	NA	52	520	intron_retention	FALSE	canonical	3	17	junction_1	98.7362859675543	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGGACTTCTCCCTTTA	41573898	True	NA	9	True	AATAAA	-18	NA	41578266	41621914	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_41578581_41598291_41599305_41609415_41609486_41609654_41609956_41610735_41610811_41611902_41611993_41612179_41612274_41612844_41612961_41614385_41614442_41614962_41615049_41618683_41618813_41618897_41618978_41620892
transcript_188441.nic	chr8	+	4181	12	NIC	ENSG00000158669.11	novel	6298	13	NA	NA	-178	520	intron_retention	FALSE	canonical	3	319	junction_2	27.380997210921	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGGACTTCTCCCTTTA	NA	False	NA	9	True	AATAAA	-18	NA	41578009	41621914	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_41578279_41598291_41599305_41609415_41609486_41609654_41610811_41611902_41611993_41612179_41612274_41612844_41612961_41614385_41614442_41614962_41615049_41618683_41618813_41618897_41618978_41620892
transcript_188460.known	chr8	+	3770	8	FSM	ENSG00000147536.12	ENST00000276533.4	3770	8	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_7	14.8804761828569	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGTGGAACAGGAAATGA	41523286	True	NA	12	True	AATAAA	-21	NA	41529260	41545030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_41529397_41530183_41530299_41536359_41536447_41537179_41537294_41539677_41539776_41539915_41540005_41541808_41541900_41541990
transcript_188467.known	chr8	+	1903	6	FSM	ENSG00000147533.18	ENST00000405786.2	1903	6	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_4	265.097416056815	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGTTGTCTCTGTGTC	41481317	True	NA	NA	False	AATAAA	-10	NA	41490561	41510974	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_41490618_41490832_41490966_41497508_41497662_41505910_41506013_41507053_41507122_41509583
transcript_18847.known	chr1	-	2011	15	FSM	ENSG00000143486.16	ENST00000271764.7	2011	15	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_6	19.8889775647575	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGACTTCCCTCTTGTTTC	-206610250	True	NA	-6	True	AATAAA	-19	NA	206612465	206591641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_206591846_206593618_206593794_206595717_206595839_206597099_206597196_206599002_206599093_206599462_206599613_206599732_206599837_206600262_206600309_206602335_206602454_206602950_206603205_206605399_206605508_206608235_206608327_206609375_206609460_206611183_206611375_206612286
transcript_188470.known	chr8	+	835	6	FSM	ENSG00000147536.12	ENST00000520354.5	835	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	60.570619940694	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTTGGTGGTGTGCACC	41523243	True	NA	NA	False	AATACA	-13	NA	41529217	41542239	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_41529397_41530183_41530299_41536359_41536447_41537179_41537294_41541808_41541900_41541990
transcript_188473.known	chr8	+	494	4	FSM	ENSG00000147536.12	ENST00000520631.5	494	4	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_3	0.942809041582063	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGATACCTGGAGGGATT	41523252	True	NA	NA	False	NA	NA	NA	41529226	41537301	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_41529397_41530183_41530299_41536359_41536447_41537179
transcript_188477.known	chr8	+	2099	5	FSM	ENSG00000147533.18	ENST00000357743.9	2099	5	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_3	67.9535687068751	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCTGTGTCATATTT	41481337	True	NA	NA	False	AATAAA	-16	NA	41490581	41510980	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_41490966_41497508_41497662_41505910_41506013_41507058_41507122_41509583
transcript_188478.known	chr8	+	2022	3	FSM	ENSG00000147536.12	ENST00000520710.5	2022	3	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_2	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATTGCAAAACATTCCTA	41523246	True	NA	NA	False	NA	NA	NA	41529220	41538036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_41530299_41536359_41536447_41537179
transcript_188490.known	chr8	-	1770	1	FSM	ENSG00000260588.1	ENST00000563810.1	1770	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCGACCGGGAACTCCAT	NA	False	NA	-7	True	ATTAAA	-15	NA	41829934	41828164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_41828200_41829900
transcript_188491.known	chr8	-	8006	18	FSM	ENSG00000083168.11	ENST00000396930.4	8006	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_17	5.8416237018528	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAGGTAAAAAAAAAAAAAA	-42050810	True	NA	NA	False	NA	NA	NA	42051990	41930760	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_41934868_41937255_41937569_41940841_41941445_41942792_41943001_41943747_41943980_41946590_41946685_41947750_41947913_41949221_41949364_41955295_41955412_41974703_41974823_41977007_41977328_41978641_41978778_41980845_41980928_41981838_41981955_41987454_41987564_42048377_42049303_42049575_42049708_42051900
transcript_188494.known	chr8	-	9153	17	FSM	ENSG00000083168.11	ENST00000265713.8	9153	17	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	5.04820512657717	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCTTGCATGTGGAA	-42050807	True	NA	1	True	AATAAA	-21	NA	42051987	41929478	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_41934868_41937255_41937569_41940841_41941445_41942792_41943001_41943747_41943980_41946590_41946685_41947750_41947913_41949221_41949364_41955295_41955412_41974703_41974823_41977007_41977328_41978641_41978778_41980845_41980928_41981838_41981955_41987454_41987564_42048377_42049303_42051900
transcript_1885.nnic	chr1	-	3295	6	NNC	ENSG00000116237.16	novel	4795	5	NA	NA	-88	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	158.135890929289	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGTGTGATTGTCTGGG	-6236046	False	NA	-4	True	AATAAA	-22	NA	6236060	6221192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_6222161_6223756_6225263_6231901_6232120_6233473_6233644_6234885_6234975_6235716
transcript_188503.known	chr8	-	3326	9	FSM	ENSG00000083168.11	ENST00000648030.1	3326	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	6.02079728939615	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TACTAAAAATACAAAAATTA	-42050807	True	NA	NA	False	NA	NA	NA	42051987	41973403	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_41974823_41977007_41977328_41978641_41978778_41980845_41980928_41981838_41981955_41987454_41987564_42048377_42049303_42049575_42049708_42051900
transcript_188505.known	chr8	-	3100	8	FSM	ENSG00000083168.11	ENST00000470574.2	3100	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	4.92391083988974	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAATCCCAGCACATTGG	-42050807	True	NA	NA	False	NA	NA	NA	42051987	41973497	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_41974823_41977007_41977328_41978641_41978778_41980845_41980928_41981838_41981955_41987454_41987564_42048377_42049303_42051900
transcript_188512.known	chr8	+	3669	10	FSM	ENSG00000070718.12	ENST00000518421.5	3669	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	35.3022225019934	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTATGTCCTAAGTGGTT	NA	False	NA	23	True	AATAAA	-17	NA	42152945	42171182	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_42153106_42154477_42154537_42154615_42154961_42157940_42158113_42162280_42162419_42165070_42165157_42165426_42165561_42167163_42167372_42167665_42167811_42168960
transcript_188515.known	chr8	+	3494	9	FSM	ENSG00000070718.12	ENST00000396926.8	3494	9	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	18.2581317499902	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTATGTCCTAAGTGGTTT	42152646	True	NA	24	True	AATAAA	-18	NA	42153062	42171183	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_42153106_42154615_42154961_42157940_42158113_42162280_42162419_42165070_42165157_42165426_42165561_42167163_42167372_42167665_42167811_42168960
transcript_188525.known	chr8	+	1212	8	FSM	ENSG00000070718.12	ENST00000530375.5	1212	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	38.1570332137271	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCAGCCTGTCTCCTAGGT	42152668	True	NA	-3	True	AGTAAA	-7	NA	42153084	42169131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_42153106_42154615_42154961_42157940_42158113_42162280_42162419_42165070_42165157_42165426_42165561_42167665_42167811_42168960
transcript_188528.known	chr8	+	966	8	FSM	ENSG00000070718.12	ENST00000521280.5	966	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	37.5668112317568	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGCATAAAATACATGACC	42152657	True	NA	NA	False	NA	NA	NA	42153073	42169011	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_42153106_42157940_42158113_42162280_42162419_42165070_42165157_42165426_42165561_42167163_42167372_42167665_42167811_42168960
transcript_188533.known	chr8	+	1094	5	FSM	ENSG00000070718.12	ENST00000517922.5	1094	5	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	18.9538914210249	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAAGAGAATCTGAATAG	42154591	False	NA	NA	False	AATAAA	-21	NA	42154615	42165779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_42154961_42157940_42158113_42162280_42162419_42165070_42165157_42165426
transcript_188534.known	chr8	-	3062	14	FSM	ENSG00000104368.19	ENST00000220809.9	3062	14	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	3.30858664117024	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGCAACGAGGAGCCATGG	-42207292	True	NA	NA	False	GGGGCT	-39	NA	42207565	42174717	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_42176152_42178896_42179064_42179925_42180067_42180241_42180379_42180489_42180686_42181936_42182023_42182718_42182891_42185080_42185173_42187397_42187573_42187905_42188017_42188933_42189072_42191371_42191415_42193113_42193212_42207493
transcript_188535.known	chr8	-	2516	13	FSM	ENSG00000104368.19	ENST00000352041.7	2516	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	5.77530662966623	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCAGAGTGGAATGGTT	-42207657	False	NA	-8	True	AATAAA	-28	NA	42207676	42175236	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_42176152_42178896_42179064_42179925_42180067_42180241_42180379_42180489_42180686_42181936_42182023_42182718_42182891_42185080_42185173_42187397_42187573_42187905_42188017_42191371_42191415_42193113_42193212_42207493
transcript_188537.nic	chr8	-	2324	12	ISM	ENSG00000104368.19	ENST00000679300.1	2690	15	123	3787	-21	999	5prime_fragment	FALSE	canonical	3	13	junction_2	3.54195631614148	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGTTCTCCCCTTTCAG	-42207313	True	NA	NA	False	TATAAA	-21	NA	42207586	42179083	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_42180067_42180241_42180379_42180489_42180686_42181936_42182023_42182718_42182891_42185080_42185173_42187397_42187573_42187905_42188017_42188933_42189072_42191371_42191415_42193113_42193212_42207493
transcript_188538.known	chr8	-	2693	14	FSM	ENSG00000104368.19	ENST00000679151.1	2693	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	6.04519467827338	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTGGAATGGTTTTGT	-42207671	False	NA	-4	True	AATAAA	-32	NA	42207690	42175232	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_42176152_42178896_42179064_42179925_42180067_42180241_42180379_42180489_42180686_42181936_42182023_42182718_42182891_42185080_42185173_42187397_42187573_42187905_42188017_42188933_42189072_42191371_42191415_42193113_42193233_42207493
transcript_188541.known	chr8	+	3938	22	FSM	ENSG00000104365.16	ENST00000520810.6	3938	22	0	0	0	0	multi-exon	TRUE	canonical	3	77	junction_5	21.2645575052878	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAGTGGGAAATAACACC	NA	False	NA	16	True	AATAAA	-26	NA	42271301	42332460	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_42271470_42272082_42272206_42288633_42288729_42290155_42290274_42293442_42293513_42305186_42305276_42306342_42306433_42308900_42309026_42314321_42314430_42316209_42316340_42316709_42316905_42317656_42317772_42318551_42318676_42319269_42319422_42319584_42319647_42320734_42320845_42321895_42321946_42322053_42322154_42322346_42322495_42325969_42326098_42329123_42329215_42330913
transcript_188550.known	chr8	+	2406	21	FSM	ENSG00000104365.16	ENST00000520835.7	2406	21	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	29.8703866730915	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCAGGCCGCGTGACGTG	42269920	True	NA	NA	False	GGGGCT	-5	NA	42271317	42331067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_42271470_42288633_42288729_42290155_42290274_42293442_42293513_42305186_42305276_42306342_42306433_42308900_42309026_42314321_42314430_42316209_42316340_42316709_42316905_42317656_42317772_42318551_42318676_42319269_42319422_42319584_42319647_42320734_42320845_42321895_42321946_42322053_42322154_42322346_42322495_42325969_42326098_42329123_42329215_42330913
transcript_188552.nic	chr8	+	2491	21	ISM	ENSG00000104365.16	ENST00000520810.6	3938	22	0	3146	0	0	5prime_fragment	TRUE	canonical	3	77	junction_5	21.442656085476	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTTGTTTGTTTGCTTGT	NA	False	NA	31	True	AATAGA	-42	NA	42271301	42329314	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_42271470_42272082_42272206_42288633_42288729_42290155_42290274_42293442_42293513_42305186_42305276_42306342_42306433_42308900_42309026_42314321_42314430_42316209_42316340_42316709_42316905_42317656_42317772_42318551_42318676_42319269_42319422_42319584_42319647_42320734_42320845_42321895_42321946_42322053_42322154_42322346_42322495_42325969_42326098_42329123
transcript_18857.nnic	chr1	-	1947	14	NIC	ENSG00000143486.16	novel	2011	15	NA	NA	-86	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_5	50.435851811276	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGACTTCCCTCTTGTTTC	NA	False	NA	-6	True	AATAAA	-19	NA	206612551	206591641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_206591846_206593618_206593794_206595717_206595839_206597099_206597196_206599002_206599093_206599732_206599837_206600262_206600309_206602335_206602454_206602950_206603205_206605399_206605508_206608235_206608327_206609375_206609460_206611183_206611375_206612286
transcript_188574.known	chr8	+	1290	14	FSM	ENSG00000070501.12	ENST00000265421.9	1290	14	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	27.6771325942384	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGATGATGATCTTAT	42336898	True	NA	16	True	AATAAA	-17	NA	42338493	42371808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_42338686_42339011_42339070_42344952_42345020_42349015_42349091_42350006_42350066_42352518_42352569_42355515_42355568_42357168_42357224_42357319_42357393_42361294_42361366_42362611_42362699_42369270_42369336_42369848_42369989_42371562
transcript_188578.nic	chr8	+	1242	13	NIC	ENSG00000070501.12	novel	1290	14	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_1	27.1971965467031	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGATGATGATCTTAT	42336888	True	NA	16	True	AATAAA	-17	NA	42338483	42371808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_42338686_42344952_42345020_42349015_42349091_42350006_42350066_42352518_42352569_42355515_42355568_42357168_42357224_42357319_42357393_42361294_42361366_42362611_42362699_42369270_42369336_42369848_42369989_42371562
transcript_188586.known	chr8	+	725	9	FSM	ENSG00000070501.12	ENST00000520008.5	725	9	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	30.7113578338699	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGTGCCTCAGAGTTTAT	NA	False	NA	NA	False	NA	NA	NA	42338458	42361361	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_42338686_42344952_42345020_42349015_42349091_42350006_42350066_42352518_42352569_42355515_42355568_42357168_42357224_42357319_42357393_42361294
transcript_188589.known	chr8	+	1418	10	FSM	ENSG00000078668.14	ENST00000022615.9	1418	10	0	0	0	0	multi-exon	TRUE	canonical	3	1118	junction_5	81.955272354295	480	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATTTGTTTTAAGAAGC	42379441	True	NA	62	True	NA	NA	NA	42391879	42405937	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_42391929_42393844_42393885_42394209_42394279_42395083_42395134_42398711_42398865_42399650_42399704_42401787_42402016_42403310_42403462_42404866_42404925_42405370
transcript_188597.known	chr8	-	3752	11	FSM	ENSG00000168575.10	ENST00000520262.6	3752	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_10	33.9228536535475	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCCTCTGAAGCCTTTT	-42501056	True	NA	-11	True	AATAAA	-16	NA	42501231	42416474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_42417968_42428757_42428843_42430063_42430250_42436988_42437578_42439449_42439654_42444645_42444763_42459895_42459993_42463004_42463091_42465776_42465918_42472101_42472655_42501030
transcript_188600.known	chr8	-	2284	11	FSM	ENSG00000168575.10	ENST00000520179.5	2284	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_10	35.3385059106918	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTTCTTCCAGCTGCA	-42541489	False	1444	NA	False	NA	NA	NA	42541512	42417802	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_42417968_42428757_42428843_42430063_42430250_42436988_42437578_42439449_42439654_42444645_42444763_42459895_42459993_42463004_42463091_42465776_42465918_42472101_42472655_42541451
transcript_188601.nnic	chr8	-	3798	11	NIC	ENSG00000168575.10	novel	3752	11	NA	NA	-73	0	combination_of_known_splicesites	FALSE	canonical	3	66	junction_10	18.4997297277555	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCCTCTGAAGCCTTTT	-42541761	False	NA	-11	True	AATAAA	-16	NA	42541784	42416474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_42417968_42428757_42428843_42430063_42430250_42436988_42437578_42439449_42439654_42444645_42444763_42459895_42459993_42463004_42463091_42465776_42465918_42472101_42472655_42541537
transcript_188612.known	chr8	+	2958	4	FSM	ENSG00000176209.12	ENST00000438528.7	2958	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	290.050953378119	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGTGGTATAGAGCCAAGT	42540948	True	NA	NA	False	AATAAA	-36	NA	42541154	42555193	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_42541200_42546468_42546607_42548655_42548781_42552543
transcript_188613.known	chr8	+	878	4	FSM	ENSG00000176209.12	ENST00000498447.5	878	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	264.480623108764	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGATGGTGACTTGACCTT	42535615	False	NA	-75	True	NA	NA	NA	42541657	42552829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_42541706_42546468_42546607_42548374_42548781_42552543
transcript_188614.known	chr8	+	793	4	FSM	ENSG00000176209.12	ENST00000414154.6	793	4	0	0	0	0	multi-exon	FALSE	canonical	3	385	junction_1	117.941605136704	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGTTTCATTGTATTC	42535570	True	NA	14	True	AATAAA	-27	NA	42541612	42552980	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_42541706_42546468_42546607_42548655_42548781_42552543
transcript_188615.known	chr8	+	3704	4	FSM	ENSG00000176209.12	ENST00000417410.7	3704	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	256.190467339352	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTGGTATAGAGCCAAGTAA	42535542	True	NA	NA	False	AATAAA	-38	NA	42541584	42555195	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_42542374_42546468_42546607_42548655_42548781_42552543
transcript_188616.known	chr8	+	691	4	FSM	ENSG00000176209.12	ENST00000416469.6	691	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	268.415515365429	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCTCAGAAAAAGAGCAAC	42541770	False	NA	-76	True	NA	NA	NA	42541792	42552608	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_42542156_42546468_42546607_42548655_42548781_42552543
transcript_188619.nic	chr8	+	692	3	NIC	ENSG00000176209.12	novel	793	4	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	321	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGTTTCATTGTATTC	42535533	True	NA	14	True	AATAAA	-27	NA	42541575	42552980	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_42541706_42548655_42548781_42552543
transcript_18862.known	chr1	-	1633	13	FSM	ENSG00000143486.16	ENST00000367114.7	1633	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	60.2385881308651	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGACTTCCCTCTTGTTTC	-206610244	True	NA	-6	True	AATAAA	-19	NA	206612459	206591641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_206591846_206593618_206593794_206595717_206595839_206597099_206597196_206599002_206599093_206599462_206599613_206599732_206599837_206600262_206600309_206605399_206605508_206608235_206608327_206609375_206609460_206611183_206611375_206612286
transcript_188621.known	chr8	-	2161	3	FSM	ENSG00000131931.8	ENST00000254250.7	2161	3	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	14.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAAGTGTCTTTTGTAGA	-42841029	True	NA	-6	True	ATTAAA	-18	NA	42843325	42836673	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_42838337_42839185_42839382_42843023
transcript_188626.known	chr8	-	1943	2	FSM	ENSG00000131931.8	ENST00000345117.2	1943	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCAAAGTGTCTTTTGTA	-42841009	True	NA	-8	True	ATTAAA	-16	NA	42843305	42836675	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_42838337_42843023
transcript_188629.known	chr8	+	14348	22	FSM	ENSG00000168172.9	ENST00000307602.9	14348	22	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_16	12.5418121559125	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCCTAGATTTCTTTTT	42894415	True	NA	96	True	AATAAA	-15	NA	42896977	43030535	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_42897189_42906172_42906259_42925556_42925630_42930121_42930173_42943312_42943446_42950387_42950456_42957093_42957157_42959230_42959315_42964310_42964475_42966472_42966614_42968012_42968215_42973288_42973400_42974106_42974195_42982626_42982697_42986654_42986796_42997549_42997638_43002106_43002142_43007846_43007930_43010304_43010406_43013050_43013156_43013328_43013401_43018357
transcript_188631.nic	chr8	+	2136	19	ISM	ENSG00000168172.9	ENST00000307602.9	14348	22	-200	20187	-168	0	5prime_fragment	FALSE	canonical	3	22	junction_16	12.3893871349735	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAATGAAGCAAATGGA	42896762	False	NA	NA	False	AAGAAA	-4	NA	42896777	43010348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_42897189_42906172_42906259_42925556_42925630_42930121_42930173_42943312_42943446_42950387_42950456_42957093_42957157_42959230_42959315_42964310_42964475_42966472_42966614_42968012_42968215_42973288_42973400_42974106_42974195_42982626_42982697_42986654_42986796_42997549_42997638_43002106_43002142_43007846_43007930_43010304
transcript_188634.known	chr8	-	4116	7	FSM	ENSG00000120925.16	ENST00000534961.5	4116	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	24.2950612265127	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTGTTATTTTTCTGTT	-42896460	False	NA	0	True	AATAAA	-23	NA	42896723	42853296	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_42856429_42861744_42861856_42865415_42865490_42870003_42870113_42873930_42874007_42887727_42887872_42896253
transcript_188635.known	chr8	-	3764	7	FSM	ENSG00000120925.16	ENST00000527424.6	3764	7	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_6	9.16515138991168	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGGTGTTATTTTTC	-42896118	True	NA	-4	True	AATAAA	-19	NA	42896605	42853300	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_42856429_42861744_42861856_42865415_42865490_42870003_42870113_42873930_42874007_42887727_42887872_42896483
transcript_188637.known	chr8	-	1338	7	FSM	ENSG00000120925.16	ENST00000526349.5	1338	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	30.4795013082563	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGGAAAATTCAGTATTTC	-42896443	False	NA	-5	True	AATAAA	-15	NA	42896706	42855706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_42856429_42861744_42861856_42865415_42865490_42870003_42870113_42873930_42874007_42887848_42887872_42896483
transcript_188645.known	chr8	-	2023	6	FSM	ENSG00000120925.16	ENST00000240159.8	2023	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	30.6555052152138	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	-42896168	True	NA	NA	False	NA	NA	NA	42896655	42855247	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_42856429_42861744_42861856_42870003_42870113_42873930_42874007_42887727_42887872_42896253
transcript_188647.known	chr8	-	1265	6	FSM	ENSG00000120925.16	ENST00000319073.5	1265	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	22.8508205541945	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGGGGAAAATTCAGTATT	-42896101	True	NA	-7	True	AATAAA	-13	NA	42896588	42855708	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_42856429_42861744_42861856_42870003_42870113_42873930_42874007_42887727_42887872_42896483
transcript_188649.known	chr8	-	1169	6	FSM	ENSG00000120925.16	ENST00000528318.5	1169	6	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_5	9.01997782702374	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCATTATATGTGTTGGG	-42896460	False	NA	NA	False	AAAAAG	-11	NA	42896723	42861329	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_42861856_42865415_42865490_42870003_42870113_42873930_42874007_42887727_42887872_42896483
transcript_188656.known	chr8	+	1667	9	FSM	ENSG00000168522.13	ENST00000302279.8	1667	9	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_5	45.6124982872019	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGCCATAGAAGTTTGAT	43053572	True	NA	24	True	AATAAA	-21	NA	43056322	43085785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_43056547_43059091_43059178_43064100_43064216_43069554_43069660_43072180_43072308_43077215_43077365_43083117_43083181_43084709_43084882_43085159
transcript_188657.nic	chr8	+	4775	9	NIC	ENSG00000168522.13	novel	1667	9	NA	NA	-16	0	intron_retention	FALSE	canonical	3	55	junction_6	171.094957187522	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGCCATAGAAGTTTGAT	43056277	False	NA	24	True	AATAAA	-21	NA	43056291	43085785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_43056547_43059091_43059178_43064100_43064216_43069554_43069660_43072180_43072308_43077215_43080442_43083117_43083181_43084709_43084882_43085159
transcript_188667.known	chr8	+	982	8	FSM	ENSG00000168522.13	ENST00000533383.5	982	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	189.740961979909	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAAAGGAATATTGGAGA	43053579	True	NA	NA	False	AAGAAA	-10	NA	43056329	43085193	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_43056547_43064100_43064216_43069554_43069660_43072180_43072308_43077215_43077365_43083117_43083181_43084709_43084882_43085159
transcript_188668.known	chr8	+	4676	8	FSM	ENSG00000168522.13	ENST00000526755.5	4676	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	233.588684377878	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCATAGAAGTTTGATTTT	43053557	True	NA	27	True	AATAAA	-24	NA	43056307	43085788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_43056547_43064100_43064216_43069554_43069660_43072180_43072308_43077215_43080442_43083117_43083181_43084709_43084882_43085159
transcript_188669.nic	chr8	+	1472	7	NIC	ENSG00000168522.13	novel	1667	9	NA	NA	-6	0	intron_retention	FALSE	canonical	3	41	junction_1	188.215671209623	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGCCATAGAAGTTTGAT	43053566	True	NA	24	True	AATAAA	-21	NA	43056316	43085785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_43056547_43069554_43069660_43072180_43072308_43077215_43077365_43083117_43083181_43084709_43084882_43085159
transcript_188672.known	chr8	+	750	5	FSM	ENSG00000168522.13	ENST00000524546.5	750	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	245.456080592843	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGTAGCCTGTTGATTA	43053604	True	NA	NA	False	AATAAA	-35	NA	43056354	43070353	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_43056547_43059091_43059178_43064100_43064216_43069554_43069660_43070101
transcript_188676.known	chr8	+	5227	18	FSM	ENSG00000165102.15	ENST00000379644.9	5227	18	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_9	7.948798085463	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCCTTTCACAAACAGATC	43140157	True	NA	NA	False	AGTAAA	-18	NA	43140463	43202855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_43140615_43146947_43147064_43158574_43158712_43158922_43159045_43161437_43161508_43169172_43169243_43170584_43170695_43172309_43172387_43173712_43173744_43178073_43178235_43182144_43182261_43191473_43191596_43192303_43192431_43193756_43193844_43196947_43197026_43197671_43197743_43197839_43197953_43199387
transcript_188689.known	chr8	+	3625	20	FSM	ENSG00000164808.17	ENST00000297423.9	3625	20	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_5	12.1452429044361	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGCGGCTTTTTAATTAA	47256493	True	NA	NA	False	NA	NA	NA	47260937	47736306	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_47260992_47279861_47280018_47284027_47284095_47291032_47291138_47293866_47294031_47396375_47396627_47407860_47407962_47440322_47440543_47595810_47596007_47598945_47599197_47673800_47673942_47700402_47700491_47701720_47701865_47701955_47702016_47712661_47712873_47713488_47713642_47727199_47727294_47728932_47729048_47729411_47729466_47735306
transcript_188690.nnic	chr8	+	3314	20	NIC	ENSG00000164808.17	novel	3625	20	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_18	33.6052528541385	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCACTTTGCAGTTCACTA	47256464	True	NA	7	True	AATAAA	-11	NA	47260908	47735911	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_47260992_47279861_47280018_47284027_47284095_47291032_47291138_47293866_47294031_47396375_47396627_47407860_47407962_47440322_47440543_47595810_47596007_47598945_47599197_47673800_47673942_47700402_47700491_47701720_47701865_47701955_47702016_47712661_47712873_47713488_47713642_47727199_47727294_47728932_47729103_47729411_47729466_47735306
transcript_188701.known	chr8	+	2745	19	FSM	ENSG00000164808.17	ENST00000522117.5	2745	19	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	35.0785714195933	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGGGTAGTTATTTGTT	47256511	True	NA	NA	False	NA	NA	NA	47260955	47735511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_47260992_47279861_47280018_47291032_47291138_47293866_47294031_47396375_47396627_47407860_47407962_47440322_47440543_47595810_47596007_47598945_47599197_47673800_47673942_47700402_47700491_47701720_47701865_47701955_47702016_47712661_47712873_47713488_47713642_47727199_47727294_47728932_47729048_47729411_47729466_47735306
transcript_188705.nic	chr8	+	3098	18	NIC	ENSG00000164808.17	novel	3625	20	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_17	35.0436208648849	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCAGTTCACTACTTTT	47256461	True	NA	12	True	AATAAA	-16	NA	47260905	47735916	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_47260992_47279861_47280018_47284027_47284095_47291032_47291138_47293866_47294031_47396375_47396627_47407860_47407962_47440322_47440543_47595810_47596007_47598945_47599197_47673800_47673942_47700402_47700491_47701720_47701865_47701955_47702016_47712661_47712873_47713488_47713642_47727199_47727294_47735306
transcript_188709.nnic	chr8	+	3000	17	NIC	ENSG00000164808.17	novel	3625	20	NA	NA	-9	-1	combination_of_known_splicesites	FALSE	canonical	2	13	junction_16	34.4800100601783	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCACTTTGCAGTTCACT	47256459	True	NA	6	True	AATAAA	-10	NA	47260903	47735910	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_47260992_47279861_47280018_47284027_47284095_47291032_47291138_47293866_47294031_47396375_47396627_47407860_47407962_47440322_47440543_47595810_47596007_47598945_47599197_47673800_47673942_47700402_47700491_47701720_47701865_47701955_47702016_47712661_47712873_47713488_47713642_47735306
transcript_188718.known	chr8	+	2761	15	FSM	ENSG00000164808.17	ENST00000524141.5	2761	15	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_5	12.6347835399757	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTTCTTCAAGGCTTC	47256510	True	NA	NA	False	NA	NA	NA	47260954	47713441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_47260992_47279861_47280018_47284027_47284095_47291032_47291138_47293866_47294031_47396375_47396627_47407860_47407962_47440322_47440543_47595810_47596007_47598945_47599197_47673800_47673942_47700402_47700491_47701720_47701865_47701955_47702016_47712661
transcript_188729.known	chr8	-	1252	1	FSM	ENSG00000221869.5	ENST00000408965.4	1252	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGCTTCCTATATTCGCA	-47737842	True	NA	-1	True	AATAAA	-18	NA	47738164	47736912	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_47736900_47738200
transcript_188730.known	chr8	-	12784	85	FSM	ENSG00000253729.8	ENST00000338368.7	12784	85	0	0	0	0	multi-exon	TRUE	canonical	3	38	junction_6	206.55691621727	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATAGTTGATGTAACATT	-47930258	True	NA	NA	False	AGTAAA	-5	NA	47960178	47773734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_47774378_47776843_47776984_47777685_47777875_47778458_47778661_47778727_47778800_47779003_47779094_47782377_47782599_47783741_47783810_47785112_47785318_47788905_47789050_47789150_47789239_47794289_47794502_47798236_47798398_47799209_47799391_47800792_47800987_47803305_47803481_47807136_47807327_47817449_47817562_47819401_47819511_47820718_47820944_47821603_47821793_47823857_47823997_47826655_47826862_47828167_47828348_47830604_47830737_47831813_47831927_47834195_47834397_47836337_47836528_47837211_47837420_47839147_47839247_47840015_47840190_47849153_47849304_47849378_47849504_47852672_47852785_47854082_47854215_47855221_47855374_47857155_47857300_47858515_47858636_47858848_47858987_47859610_47859760_47860898_47860972_47862061_47862128_47862372_47862542_47863398_47863578_47864555_47864764_47877723_47877852_47879490_47879659_47881415_47881521_47881911_47882098_47885943_47886148_47887546_47887706_47888517_47888651_47889013_47889223_47890256_47890481_47893138_47893388_47897160_47897295_47898469_47898570_47900372_47900468_47902568_47902796_47904868_47904977_47912409_47912563_47913900_47914065_47915327_47915419_47918276_47918384_47927193_47927354_47927770_47927891_47929091_47929179_47929852_47930013_47930671_47930788_47933019_47933173_47933964_47934091_47935008_47935059_47935731_47935901_47936352_47936518_47939550_47939698_47943208_47943367_47943852_47943884_47943973_47944030_47953619_47953720_47953806_47953920_47954337_47954447_47955873_47955949_47957170_47957264_47957354_47957432_47959972
transcript_188752.known	chr8	-	589	3	FSM	ENSG00000253729.8	ENST00000546304.1	589	3	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTCCTACGGTGTGCAC	NA	False	NA	NA	False	NA	NA	NA	47864792	47862368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_47862542_47863398_47863578_47864555
transcript_188755.known	chr8	+	3157	18	FSM	ENSG00000104738.18	ENST00000649838.1	3157	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	498.527096992717	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCGTCTCTAGTAAAGATAA	47932113	True	NA	116	True	NA	NA	NA	47960897	47977089	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_47961015_47961130_47961215_47961515_47961681_47962052_47962217_47962304_47962407_47962763_47962860_47962944_47963041_47964573_47964713_47966186_47966408_47967364_47967486_47969278_47969402_47969797_47970058_47970510_47970877_47971340_47971469_47972856_47973065_47974733_47974963_47975714_47975849_47976685
transcript_18877.known	chr1	+	3799	6	FSM	ENSG00000266094.8	ENST00000579436.7	3799	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2.92574776766556	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTAGGCGGGAGGGCGCT	206507415	True	NA	NA	False	AATGAA	-38	NA	206507530	206589448	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_206508060_206538171_206538294_206583268_206583380_206584386_206584685_206585179_206585296_206586825
transcript_188777.known	chr8	+	4062	17	FSM	ENSG00000104738.18	ENST00000649973.1	4062	17	0	0	0	0	multi-exon	FALSE	canonical	3	1210	junction_1	130.354549570585	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATGAGTTGGGCCTTTT	47932156	True	NA	8	True	AATAAA	-21	NA	47960940	47978160	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_47961015_47961130_47961215_47961515_47961681_47962052_47962217_47962304_47962407_47962763_47962860_47962944_47963041_47964573_47964713_47966186_47966408_47967364_47967486_47969797_47970058_47970510_47970877_47971340_47971469_47972856_47973065_47974733_47974963_47975714_47975849_47976685
transcript_18878.known	chr1	+	3496	5	FSM	ENSG00000266094.8	ENST00000577571.5	3496	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	3.26917420765551	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGACTCATGTTAGAA	206557098	True	NA	10	True	AATAAA	-11	NA	206557164	206589267	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_206557694_206583268_206583380_206584386_206584685_206585179_206585296_206586825
transcript_188794.known	chr8	+	3226	17	FSM	ENSG00000104738.18	ENST00000648519.1	3226	17	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	386.225277323675	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGATGGCATGCGCCTG	47932167	True	NA	NA	False	AGTAAA	-20	NA	47960951	47977123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_47961015_47961130_47961427_47961515_47961681_47962052_47962217_47962304_47962407_47962763_47962860_47962944_47963041_47964573_47964713_47966186_47966408_47967364_47967486_47969797_47970058_47970510_47970877_47971340_47971469_47972856_47973065_47974733_47974963_47975714_47975849_47976685
transcript_18881.known	chr1	+	2218	4	FSM	ENSG00000143479.18	ENST00000367108.7	2218	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	4.49691252107735	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGTTATTATCGTCAGA	206634881	True	NA	14	True	ATTAAA	-23	NA	206635578	206649197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_206635781_206636874_206636969_206637649_206637762_206647387
transcript_188813.known	chr8	+	2957	16	FSM	ENSG00000104738.18	ENST00000649919.1	2957	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	397.608662995273	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGTAAAGATAACAAAAAAT	47932114	True	NA	124	True	NA	NA	NA	47960898	47977097	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_47961015_47961515_47961681_47962052_47962217_47962304_47962407_47962763_47962860_47962944_47963041_47964573_47964713_47966186_47966408_47967364_47967486_47969797_47970058_47970510_47970877_47971340_47971469_47972856_47973065_47974733_47974963_47975714_47975849_47976685
transcript_18883.known	chr1	+	8128	3	FSM	ENSG00000143479.18	ENST00000367109.8	8128	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTAGCATCCTGATTGT	206634838	True	NA	17	True	AATAAA	-19	NA	206635535	206655158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_206635781_206637649_206637762_206647387
transcript_188849.known	chr8	+	4183	16	FSM	ENSG00000104738.18	ENST00000262105.6	4183	16	0	0	0	0	multi-exon	FALSE	canonical	3	1266	junction_10	107.297385284493	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATGAGTTGGGCCTTTT	47932151	True	NA	8	True	AATAAA	-21	NA	47960935	47978160	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_47961215_47961515_47961681_47962052_47962217_47962304_47962407_47962763_47962860_47962944_47963041_47964573_47964713_47966186_47966408_47967364_47967486_47969797_47970058_47970510_47970877_47971340_47971469_47972856_47973065_47974733_47974963_47975714_47975849_47976685
transcript_188851.known	chr8	+	1322	5	FSM	ENSG00000169139.12	ENST00000521346.5	1322	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	2028.80291058545	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTCAACAAAAAGGAAATAGG	47985068	True	NA	-64	True	NA	NA	NA	48008418	48061480	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_48008471_48034865_48035062_48043032_48043182_48049852_48049979_48060681
transcript_188852.known	chr8	+	4342	4	FSM	ENSG00000169139.12	ENST00000523111.7	4342	4	0	0	0	0	multi-exon	FALSE	canonical	3	3322	junction_1	381.393060590602	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTGAGTTACATGATTGA	47985080	True	NA	28	True	AATAAA	-19	NA	48008430	48064708	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_48008471_48043032_48043182_48049852_48049979_48060681
transcript_188856.known	chr8	+	918	3	FSM	ENSG00000169139.12	ENST00000523432.5	918	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	2086	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACATGGTAAATATTTGTT	47985064	True	NA	48	True	NA	NA	NA	48008414	48061417	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_48008471_48049852_48049979_48060681
transcript_18886.known	chr1	+	3091	10	FSM	ENSG00000162889.11	ENST00000367103.4	3091	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	2.86744175568088	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGTTTTTCTTTCTCTTT	206682888	True	NA	21	True	ACTAAA	-15	NA	206684904	206734281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_206685509_206728709_206728850_206729034_206729100_206729395_206729476_206729971_206730099_206730687_206730764_206731137_206731263_206731639_206731726_206731838_206731920_206732574
transcript_188860.known	chr8	-	1204	6	FSM	ENSG00000168300.14	ENST00000519559.1	1204	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	50.2179250865664	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAAATGTTGTTTTAGCT	-51895433	False	NA	7	True	AATAAA	-39	NA	51898970	51820146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_51820719_51831443_51831568_51833517_51833690_51839446_51839639_51845660_51845764_51898929
transcript_188861.known	chr8	-	4044	6	FSM	ENSG00000168300.14	ENST00000522514.6	4044	6	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_4	16.4389780704276	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTTTCTCCCATGGCCT	-51895499	True	NA	-13	True	AATAAA	-18	NA	51899036	51817582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_51820719_51831443_51831568_51833517_51833690_51845660_51845764_51860844_51861247_51898929
transcript_18887.known	chr1	-	5501	4	FSM	ENSG00000182795.13	ENST00000359470.6	5501	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	1.69967317119759	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGGTCTTATTTTTTT	-207032601	True	NA	-1	True	AATAAA	-13	NA	207032756	207018521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_207023481_207024886_207025065_207027493_207027680_207032578
transcript_188870.known	chr8	+	4085	3	FSM	ENSG00000228801.7	ENST00000518942.2	4085	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCCTTGCTACAACCTGG	51899113	True	NA	-1	True	ATTAAA	-4	NA	51899324	51949874	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_51899847_51913056_51913181_51946435
transcript_188871.known	chr8	-	1140	5	FSM	ENSG00000196711.9	ENST00000358543.9	1140	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	1.92028643696715	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTATGCTTTTGAAGTGTG	-52565209	True	NA	NA	False	ATTAAA	-16	NA	52565430	52534036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_52534601_52538430_52538508_52539830_52539912_52542391_52542446_52565066
transcript_188878.nic	chr8	-	4486	16	ISM	ENSG00000023287.13	ENST00000025008.10	6636	24	-21	23293	10	12134	5prime_fragment	FALSE	canonical	3	196	junction_4	27.093582676018	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATGAAGAAATGCAAAATG	-52711011	True	NA	19	True	AAAAAG	-41	NA	52714456	52645750	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_52645868_52656007_52657909_52657997_52658125_52658872_52658977_52660595_52660658_52660925_52661008_52661094_52661282_52661534_52661720_52668020_52668192_52673844_52674275_52676368_52676572_52683548_52683720_52683886_52684014_52685398_52685521_52686852_52686968_52714074
transcript_188890.nic	chr8	-	3671	15	ISM	ENSG00000023287.13	ENST00000025008.10	6636	24	-21	34248	10	1179	5prime_fragment	FALSE	canonical	3	196	junction_3	27.8809422146295	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGTTACAGGAATTAAAACT	-52711011	True	NA	NA	False	AATACA	-38	NA	52714456	52656705	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_52657909_52657997_52658125_52658872_52658977_52660595_52660658_52660925_52661008_52661094_52661282_52661534_52661720_52668020_52668192_52673844_52674275_52676368_52676572_52683548_52683720_52683886_52684014_52685398_52685521_52686852_52686968_52714074
transcript_188895.nic	chr8	-	3289	15	ISM	ENSG00000023287.13	ENST00000025008.10	6636	24	-80	34689	-49	738	5prime_fragment	FALSE	canonical	3	196	junction_3	27.8809422146295	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAGGGAGAGTTAGTATG	NA	False	NA	NA	False	AATAAA	-35	NA	52714515	52657146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_52657909_52657997_52658125_52658872_52658977_52660595_52660658_52660925_52661008_52661094_52661282_52661534_52661720_52668020_52668192_52673844_52674275_52676368_52676572_52683548_52683720_52683886_52684014_52685398_52685521_52686852_52686968_52714074
transcript_188902.nic	chr8	-	3193	15	ISM	ENSG00000023287.13	ENST00000025008.10	6636	24	-80	34785	-49	642	5prime_fragment	FALSE	canonical	3	196	junction_3	27.8809422146295	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCAAAAAGAACTACTGTC	NA	False	NA	NA	False	AGTAAA	-32	NA	52714515	52657242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_52657909_52657997_52658125_52658872_52658977_52660595_52660658_52660925_52661008_52661094_52661282_52661534_52661720_52668020_52668192_52673844_52674275_52676368_52676572_52683548_52683720_52683886_52684014_52685398_52685521_52686852_52686968_52714074
transcript_188908.nic	chr8	-	3167	14	NIC	ENSG00000023287.13	novel	6636	24	NA	NA	-49	738	combination_of_known_junctions	FALSE	canonical	3	24	junction_12	69.0600459080966	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAGGGAGAGTTAGTATG	NA	False	NA	NA	False	AATAAA	-35	NA	52714515	52657146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_52657909_52657997_52658125_52658872_52658977_52660595_52660658_52660925_52661008_52661094_52661282_52661534_52661720_52668020_52668192_52673844_52674275_52676368_52676572_52683548_52683720_52683886_52684014_52686852_52686968_52714074
transcript_18891.known	chr1	-	3142	3	FSM	ENSG00000182795.13	ENST00000461135.2	3142	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTATTGCTGTGGCTTTT	-207032601	True	NA	-1	True	ATTAAA	-16	NA	207032756	207020694	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_207023481_207024886_207025065_207032578
transcript_188912.nic	chr8	-	3012	14	NIC	ENSG00000023287.13	novel	6636	24	NA	NA	10	642	combination_of_known_junctions	FALSE	canonical	3	24	junction_12	69.0600459080966	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCAAAAAGAACTACTGTC	-52711011	True	NA	NA	False	AGTAAA	-32	NA	52714456	52657242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_52657909_52657997_52658125_52658872_52658977_52660595_52660658_52660925_52661008_52661094_52661282_52661534_52661720_52668020_52668192_52673844_52674275_52676368_52676572_52683548_52683720_52683886_52684014_52686852_52686968_52714074
transcript_188919.known	chr8	-	6636	24	FSM	ENSG00000023287.13	ENST00000025008.10	6636	24	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_2	51.2274663450043	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTCTATTTAATCTTT	-52710990	True	NA	-9	True	AATAAA	-17	NA	52714435	52622457	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_52623860_52624716_52624788_52628031_52628169_52630469_52630529_52634920_52634969_52636014_52636070_52642350_52642592_52642703_52642813_52645701_52645868_52656007_52657909_52657997_52658125_52658872_52658977_52660595_52660658_52660925_52661008_52661094_52661282_52661534_52661720_52668020_52668192_52673844_52674275_52676368_52676572_52683548_52683720_52683886_52684014_52685398_52685521_52686852_52686968_52714074
transcript_188920.known	chr8	-	4954	4	FSM	ENSG00000082556.14	ENST00000265572.8	4954	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	5.35412613473634	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGTCAATTATTGTGGT	-53251525	True	NA	-8	True	AATAAA	-27	NA	53251637	53225723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_53229830_53234758_53235112_53250780_53251086_53251447
transcript_188925.known	chr8	-	1892	14	FSM	ENSG00000047249.18	ENST00000396774.6	1892	14	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_13	71.481615131271	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCTGTATTTATTGTTC	-53839481	False	NA	-62	True	AAGAAA	-27	NA	53843042	53715730	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_53716025_53743576_53743691_53756554_53756657_53769617_53769744_53771988_53772168_53795646_53795840_53801798_53801897_53811163_53811218_53814661_53814767_53817416_53817531_53829443_53829534_53832983_53833087_53841577_53841726_53842870
transcript_188927.known	chr8	-	2120	14	FSM	ENSG00000047249.18	ENST00000359530.7	2120	14	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_7	45.3247323317716	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGTCTCTATGCAGCTC	-53839684	True	NA	2	True	AATAAA	-27	NA	53843245	53715542	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_53716025_53743576_53743691_53756554_53756657_53769617_53769744_53771988_53772168_53795646_53795840_53801798_53801897_53811163_53811218_53814661_53814767_53817416_53817531_53829443_53829534_53832983_53833087_53841577_53841726_53843033
transcript_188932.known	chr8	-	2365	13	FSM	ENSG00000047249.18	ENST00000355221.7	2365	13	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_7	64.7179242731272	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCGCTCTATCAATCTATG	NA	False	NA	-12	True	AATAAA	-13	NA	53843558	53715556	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_53716025_53743576_53743691_53756554_53756657_53769617_53769744_53771988_53772168_53795646_53795840_53801798_53801897_53814661_53814767_53817416_53817531_53829443_53829534_53832983_53833087_53841577_53841726_53843033
transcript_188939.known	chr8	+	1664	5	FSM	ENSG00000147509.14	ENST00000276500.4	1664	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.866025403784439	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAATAAAGCACAAGAATT	53880860	True	NA	NA	False	AAGAAA	-23	NA	53880893	53959274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_53881085_53939575_53939725_53946664_53946749_53954075_53954311_53958269
transcript_188940.known	chr8	+	1559	4	FSM	ENSG00000147509.14	ENST00000522225.5	1559	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAATCTTTATTTTTCC	53880838	True	NA	NA	False	AATAAA	-14	NA	53880871	53959296	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_53881085_53946664_53946749_53954075_53954311_53958269
transcript_188946.known	chr8	-	2777	10	FSM	ENSG00000187735.15	ENST00000521604.7	2777	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	520.453031526084	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCACATTTTGTCATTTTA	-54001146	True	NA	-2	True	AATAAA	-23	NA	54022448	53966555	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_53968113_53970391_53970464_53979024_53979172_53984362_53984518_53986968_53987026_53988113_53988260_53993667_53993756_53999944_54000051_54010429_54010493_54022062
transcript_188947.known	chr8	-	2718	9	FSM	ENSG00000187735.15	ENST00000396401.7	2718	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	624.994799978368	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGTCATTTTATTTA	-54001146	True	NA	2	True	AATAAA	-27	NA	54022448	53966551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_53968113_53970391_53970464_53979024_53979172_53984362_53984518_53986968_53987026_53988113_53988260_53993667_53993756_53999944_54000051_54022062
transcript_188956.nic	chr8	-	913	6	ISM	ENSG00000187735.15	ENST00000640382.1	1234	10	-55	16677	-55	6411	5prime_fragment	FALSE	canonical	3	739	junction_1	326.458205594529	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGTGTGTATATTCATA	-54022496	False	NA	NA	False	NA	NA	NA	54022511	53986964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_53987026_53988113_53988260_53993667_53993756_53999944_54000051_54010429_54010493_54022062
transcript_188958.known	chr8	-	569	5	FSM	ENSG00000187735.15	ENST00000518310.5	569	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	764.325969400491	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAGACATATATTTATATT	-54001012	True	NA	NA	False	AAGAAA	-13	NA	54022314	53993656	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_53993756_53999944_54000051_54002891_54002941_54010429_54010493_54022062
transcript_188961.known	chr8	-	635	4	FSM	ENSG00000187735.15	ENST00000520534.5	635	4	0	0	0	0	multi-exon	FALSE	canonical	3	1532	junction_1	48.7715764217917	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGGATTCAAATGGTTGC	-54022133	False	NA	NA	False	NA	NA	NA	54022148	53993375	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_53993756_53999944_54000051_54010429_54010493_54022062
transcript_188963.known	chr8	-	586	3	FSM	ENSG00000187735.15	ENST00000518784.5	586	3	0	0	0	0	multi-exon	FALSE	canonical	3	1552	junction_2	46	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAGGATGATTAAAAGAAT	-54022144	False	NA	NA	False	NA	NA	NA	54022159	53999624	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_54000051_54010429_54010493_54022062
transcript_18897.known	chr1	+	7073	15	FSM	ENSG00000123836.15	ENST00000367080.8	7073	15	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_14	11.8358242084731	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAAGGCTTCTGGGTTTT	207051514	True	NA	8	True	AATAAA	-23	NA	207053274	207077817	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_207053367_207054700_207054803_207061952_207062079_207062619_207062717_207063142_207063210_207063346_207063422_207063772_207063830_207065035_207065161_207067498_207067707_207068162_207068310_207069423_207069529_207070279_207070410_207071187_207071251_207071508_207071574_207072203
transcript_188985.known	chr8	-	2526	9	FSM	ENSG00000120992.18	ENST00000618741.1	2526	9	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_8	493.19048994785	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGAGTATTTTAATATT	-54101486	False	NA	-2	True	AATAAA	-23	NA	54101554	54046367	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_54048119_54051011_54051189_54052654_54052757_54055059_54055134_54062253_54062325_54063327_54063376_54065747_54065814_54100907_54100940_54101349
transcript_188986.known	chr8	-	2515	9	FSM	ENSG00000120992.18	ENST00000316963.8	2515	9	0	0	0	0	multi-exon	TRUE	canonical	3	1411	junction_6	92.2936041933568	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAGTATTTTAATATTT	-54086198	True	NA	-1	True	AATAAA	-24	NA	54101947	54046366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_54048119_54051011_54051189_54052654_54052757_54055059_54055134_54062253_54062325_54063327_54063376_54065747_54065814_54100907_54100940_54101754
transcript_188988.nnic	chr8	-	2528	9	NNC	ENSG00000120992.18	novel	2515	9	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	3	128	junction_6	487.435893220842	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGAGTATTTTAATATT	-54086252	True	NA	-2	True	AATAAA	-23	NA	54102001	54046367	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_-_54048119_54051011_54051189_54052654_54052757_54055059_54055134_54062253_54062325_54063327_54063376_54065787_54065814_54100907_54100940_54101754
transcript_18899.known	chr1	+	3494	15	FSM	ENSG00000123836.15	ENST00000367079.3	3494	15	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_14	10.1219603650999	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGCAATTAATTTTTAAG	207051550	True	NA	NA	False	AATAAA	-16	NA	207053310	207081024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_207053367_207054700_207054803_207061952_207062079_207062619_207062717_207063142_207063210_207063346_207063422_207063772_207063830_207065035_207065161_207067498_207067707_207068162_207068310_207069423_207069529_207070279_207070410_207071187_207071251_207071508_207071574_207078953
transcript_189.known	SIRV5	+	533	6	FSM	SIRV5A	SIRV507	533	6	0	0	0	0	multi-exon	FALSE	canonical	3	4288	junction_1	3154.16350876108	1564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGTAAGTGGTCAAGCCAC	NA	False	NA	NA	False	NA	NA	NA	1027	3598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV5_+_1150_1925_2034_2119_2157_2270_2316_3298_3405_3483
transcript_189004.nic	chr8	-	2493	8	NIC	ENSG00000120992.18	novel	2515	9	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	146	junction_6	509.086496800386	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGAGTATTTTAATATT	-54086243	True	NA	-2	True	AATAAA	-23	NA	54101992	54046367	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_54048119_54051011_54051189_54052654_54052757_54055059_54055134_54062253_54062325_54063327_54063376_54100907_54100940_54101754
transcript_189005.known	chr8	-	1308	8	FSM	ENSG00000120992.18	ENST00000343231.10	1308	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	549.952205715577	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAAGTTTGTTTTTTCTT	-54086079	True	NA	37	True	AAGAAA	-4	NA	54101828	54047406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_54048119_54051011_54051189_54052654_54052757_54055059_54055134_54062253_54062325_54065747_54065814_54100907_54100940_54101754
transcript_189012.known	chr8	-	2482	8	FSM	ENSG00000120992.18	ENST00000618914.4	2482	8	0	0	0	0	multi-exon	FALSE	canonical	2	49	junction_2	532.612927567708	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGAGTATTTTAATATT	-54101949	False	NA	-2	True	AATAAA	-23	NA	54102017	54046367	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_54048119_54051011_54051189_54055059_54055134_54062253_54062325_54063327_54063376_54065747_54065814_54100907_54100940_54101754
transcript_189039.known	chr8	+	1729	5	FSM	ENSG00000137547.9	ENST00000260102.9	1729	5	0	0	0	0	multi-exon	FALSE	canonical	3	822	junction_3	66.7921215413914	329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTAGTGTTCAGCTCGATT	54123348	True	NA	NA	False	NA	NA	NA	54135240	54148514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_54135392_54136510_54136666_54137267_54137434_54142662_54142787_54147381
transcript_18904.known	chr1	+	339	2	FSM	ENSG00000123836.15	ENST00000468857.1	339	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAAGTAGACTTAGTGA	207051522	True	NA	NA	False	NA	NA	NA	207053282	207054955	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_207053367_207054700
transcript_189042.nic	chr8	-	2632	8	NIC	ENSG00000167904.16	novel	2573	8	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_7	47.2029919494474	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGTTGCAGTTAATTTT	-55770828	True	NA	-14	True	AATAAA	-1	NA	55773395	55738757	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_55740219_55743480_55743621_55745060_55745122_55750963_55751158_55756243_55756412_55762634_55763029_55763935_55763981_55773226
transcript_189043.known	chr8	-	2573	8	FSM	ENSG00000167904.16	ENST00000434581.7	2573	8	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_3	23.1384475516842	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGTTGCAGTTAATTTT	-55770811	True	NA	-14	True	AATAAA	-1	NA	55773378	55738757	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_55740219_55743480_55743621_55745060_55745122_55750963_55751158_55756243_55756412_55762634_55763029_55763935_55763981_55773268
transcript_18905.known	chr1	-	6396	2	FSM	ENSG00000180667.11	ENST00000315927.9	6396	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGAGTATATTTTGGGA	-207051181	False	NA	-2	True	AATAAA	-15	NA	207051208	207043848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_207049724_207050687
transcript_189052.known	chr8	-	826	3	FSM	ENSG00000167904.16	ENST00000522576.5	826	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	78.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGTTGAAATAAGAAAATTT	-55770811	True	NA	-87	True	ATTAAA	-29	NA	55773378	55762399	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_55763029_55763935_55763981_55773226
transcript_189053.known	chr8	-	2400	3	FSM	ENSG00000167904.16	ENST00000521229.5	2400	3	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_2	24.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTCCATTTGAGTAGC	-55770800	True	NA	NA	False	ATTAAA	-18	NA	55773367	55760772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_55763029_55763935_55763981_55773268
transcript_189056.known	chr8	-	2401	6	FSM	ENSG00000167904.16	ENST00000334667.6	2401	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	61.0245852095694	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGTTGCAGTTAATTTT	-55770840	False	NA	-14	True	AATAAA	-1	NA	55773407	55738757	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_55740219_55750963_55751158_55756243_55756412_55762634_55763029_55763935_55763981_55773268
transcript_189057.known	chr8	+	4477	13	FSM	ENSG00000137574.11	ENST00000260129.6	4477	13	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	18.3626659284539	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGAAGTGTTCTAGTCT	55768491	True	NA	NA	False	GATAAA	-38	NA	55773445	55826445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_55773720_55782747_55782813_55785718_55785892_55786237_55787061_55790181_55790300_55792697_55792785_55795977_55796153_55798913_55799221_55802456_55802607_55804892_55805037_55810880_55811098_55813039_55813119_55824580
transcript_18906.known	chr1	+	2590	10	FSM	ENSG00000196352.17	ENST00000367064.9	2590	10	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	10.4680584118346	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACAGTTATCACAACTAGC	207320037	True	NA	NA	False	AATAAA	-19	NA	207321677	207360966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_207321866_207322381_207322568_207324558_207324751_207325621_207325722_207326751_207326838_207331107_207331297_207336692_207336819_207337328_207337410_207339396_207339418_207359545
transcript_189060.nic	chr8	+	2025	8	ISM	ENSG00000137574.11	ENST00000260129.6	4477	13	-3	27225	-3	222	5prime_fragment	FALSE	canonical	3	170	junction_1	15.2583199117928	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAACACTAAATATGCTTCA	55768488	True	NA	NA	False	NA	NA	NA	55773442	55799220	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_55773720_55782747_55782813_55785718_55785892_55786237_55787061_55790181_55790300_55792697_55792785_55795977_55796153_55798913
transcript_189063.nic	chr8	+	1144	4	ISM	ENSG00000137574.11	ENST00000260129.6	4477	13	-587	40163	-587	-12716	5prime_fragment	FALSE	canonical	3	170	junction_1	6.23609564462324	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATCAAAAGAAATACTTAGA	55772847	False	NA	NA	False	AATAAA	-22	NA	55772858	55786282	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_55773720_55782747_55782813_55785718_55785892_55786237
transcript_189064.nic	chr8	+	701	4	ISM	ENSG00000137574.11	ENST00000260129.6	4477	13	-3	40022	-3	-12575	5prime_fragment	FALSE	canonical	3	170	junction_1	6.23609564462324	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATACTGAGACAGAAAATCC	55768488	True	NA	NA	False	NA	NA	NA	55773442	55786423	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_55773720_55782747_55782813_55785718_55785892_55786237
transcript_189065.nic	chr8	+	908	3	ISM	ENSG00000137574.11	ENST00000260129.6	4477	13	-396	40554	-396	-13107	5prime_fragment	FALSE	canonical	3	170	junction_1	7.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATATTAATTTACTTTT	55773038	False	NA	NA	False	NA	NA	NA	55773049	55785891	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_55773720_55782747_55782813_55785718
transcript_189067.known	chr8	+	3159	11	FSM	ENSG00000137574.11	ENST00000523948.5	3159	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	78.2173893709065	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATATGTGTTGCTTAATT	55768515	True	NA	17	True	ATTAAA	-19	NA	55773469	55825448	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_55773720_55785718_55785892_55786237_55787061_55790181_55790300_55792697_55792785_55795977_55796153_55798913_55799221_55802456_55802607_55804892_55805037_55813054_55813119_55824580
transcript_189069.known	chr8	+	5808	13	FSM	ENSG00000254087.8	ENST00000520220.6	5808	13	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	26.4116714520094	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGTAGAATCTCCCTG	55875457	True	NA	NA	False	AATAAA	-14	NA	55879834	56014168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_55880104_55941854_55941929_55946447_55946494_55947617_55947724_55950458_55950558_55950680_55950785_55951965_55952116_55953831_55953985_55966714_55966898_55969716_55969794_55998345_55998500_55999417_55999550_56009907
transcript_189074.known	chr8	+	5872	13	FSM	ENSG00000254087.8	ENST00000519728.6	5872	13	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	18.8569173868194	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTAGAATCTCCCTGA	55875457	True	NA	NA	False	AATAAA	-15	NA	55879834	56014169	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_55880104_55941854_55941992_55946447_55946494_55947617_55947724_55950458_55950558_55950680_55950785_55951965_55952116_55953831_55953985_55966714_55966898_55969716_55969794_55998345_55998500_55999417_55999550_56009907
transcript_189082.known	chr8	-	650	4	FSM	ENSG00000008988.11	ENST00000521262.5	650	4	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_3	4338.02545968657	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTGGTTTTTATTCA	-55869825	True	NA	-5	True	AATAAA	-19	NA	56074510	56073053	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_56073273_56073694_56073769_56074059_56074160_56074253
transcript_189083.known	chr8	-	519	4	FSM	ENSG00000008988.11	ENST00000009589.8	519	4	0	0	0	0	multi-exon	FALSE	canonical	3	9148	junction_3	183.571965906199	3219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTGGTTTTTATTCA	-55869821	True	NA	-5	True	AATAAA	-19	NA	56074506	56073053	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_56073273_56073694_56073769_56074059_56074160_56074380
transcript_189085.known	chr8	-	737	3	FSM	ENSG00000008988.11	ENST00000521289.5	737	3	0	0	0	0	multi-exon	FALSE	canonical	3	9148	junction_2	206	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGTTGAGGTGGAAGTCA	-55869821	True	NA	-78	True	NA	NA	NA	56074506	56073126	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_56073273_56073694_56074160_56074380
transcript_189086.known	chr8	-	424	3	FSM	ENSG00000008988.11	ENST00000519606.5	424	3	0	0	0	0	multi-exon	FALSE	canonical	1	124	junction_1	4512	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGATGACCAGTTGTTA	-55869821	True	NA	-26	True	NA	NA	NA	56074506	56073074	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_56073273_56074059_56074160_56074380
transcript_189087.known	chr8	-	671	3	FSM	ENSG00000008988.11	ENST00000518875.5	671	3	0	0	0	0	multi-exon	FALSE	canonical	3	9148	junction_2	25	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAAACGATAAACACTTG	-55869813	True	NA	-111	True	AATGAA	-42	NA	56074498	56073315	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_56073769_56074059_56074160_56074380
transcript_189088.known	chr8	-	824	2	FSM	ENSG00000008988.11	ENST00000519369.1	824	2	0	0	0	0	multi-exon	FALSE	canonical	3	9148	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTGGTGTCCTAGCACAG	-55869821	True	NA	NA	False	NA	NA	NA	56074506	56073461	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_56074160_56074380
transcript_189089.known	chr8	-	752	3	FSM	ENSG00000008988.11	ENST00000524349.5	752	3	0	0	0	0	multi-exon	FALSE	canonical	3	9198	junction_2	181	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTCAGAATACTGGCAG	-55869821	True	NA	7	True	AATAAA	-31	NA	56074506	56073041	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_56073273_56073694_56073769_56074059
transcript_189090.known	chr8	-	7311	5	FSM	ENSG00000181690.8	ENST00000316981.8	7311	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	6.12372435695795	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAATGTAGATCTTCCTGA	-56209714	True	NA	-3	True	AATAAA	-18	NA	56211273	56160908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_56167504_56168027_56168387_56171090_56171190_56179408_56179514_56211120
transcript_189094.known	chr8	-	1899	4	FSM	ENSG00000181690.8	ENST00000429357.2	1899	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	9.39266853573691	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTGGGACATGGATTCA	-56209741	True	NA	NA	False	NA	NA	NA	56211300	56166242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_56167504_56168027_56168387_56171090_56171190_56211120
transcript_189096.known	chr8	-	1684	3	FSM	ENSG00000181690.8	ENST00000423799.6	1684	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	7	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAGCTTTTAAACTGAGC	-56209741	True	NA	NA	False	TATAAA	-6	NA	56211300	56166098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_56167504_56171090_56171190_56211120
transcript_189102.known	chr8	+	1670	5	FSM	ENSG00000170791.18	ENST00000518801.5	1670	5	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_2	239.10078941735	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTGATTTGTATTGAC	56201008	True	NA	17	True	AATAAA	-20	NA	56211797	56218619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_56211838_56212761_56212890_56214597_56214668_56216388_56216532_56217330
transcript_189103.known	chr8	+	1805	5	FSM	ENSG00000170791.18	ENST00000523975.5	1805	5	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_2	239.675170804153	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTCCTGATGCCACTCT	56201008	True	NA	NA	False	NA	NA	NA	56211797	56218798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_56211838_56212761_56212890_56214597_56214668_56216432_56216532_56217330
transcript_189106.nic	chr8	+	548	5	NIC	ENSG00000170791.18	novel	567	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	196	junction_2	238.3792933541	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCAGATGAATATTTCT	56200996	True	NA	9	True	ATTAAA	-17	NA	56211785	56217465	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_56211838_56212761_56212910_56214597_56214668_56216388_56216532_56217330
transcript_18911.known	chr1	+	1843	10	NNC	ENSG00000196352.17	novel	2590	10	NA	NA	-15	54	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	29.129765015814	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAAAGGCAGTCCTGGA	207320092	True	NA	61	True	NA	NA	NA	207321732	207359767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_207321866_207322381_207322568_207324558_207324751_207325621_207325722_207326751_207326838_207331107_207331297_207336692_207336944_207336946_207337410_207339396_207339418_207359545
transcript_189110.known	chr8	+	1550	5	FSM	ENSG00000170791.18	ENST00000396723.9	1550	5	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_2	238.494627822096	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTGAGTCTAAAACCAAG	56201009	True	NA	-78	True	AATGAA	-6	NA	56211798	56218524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_56211838_56212761_56212910_56214597_56214668_56216432_56216532_56217330
transcript_189113.known	chr8	+	573	4	FSM	ENSG00000170791.18	ENST00000521831.5	573	4	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_2	236.322284650056	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTTCTTCAAGTGGAGA	56200896	True	NA	51	True	NA	NA	NA	56211685	56217538	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_56211838_56214597_56214668_56216388_56216532_56217330
transcript_189115.known	chr8	+	557	4	FSM	ENSG00000170791.18	ENST00000523061.5	557	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	261.10576826685	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAGAGTATGATGTGAA	56201018	True	NA	NA	False	NA	NA	NA	56211807	56217713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_56211838_56214597_56214668_56216432_56216507_56217330
transcript_189116.known	chr8	+	1697	4	FSM	ENSG00000170791.18	ENST00000355315.8	1697	4	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_1	150.019998666844	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACTCTTGTTGAGTCTT	56200999	True	NA	NA	False	NA	NA	NA	56211788	56218809	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_56211838_56214597_56214668_56216432_56216532_56217330
transcript_189121.known	chr8	+	552	6	FSM	ENSG00000170791.18	ENST00000521982.5	552	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	227.025461127161	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATTAAAAGTGTTTATATA	56200999	True	NA	-15	True	NA	NA	NA	56211788	56217441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_56211838_56212761_56212910_56214597_56214668_56216432_56216532_56216679_56216755_56217330
transcript_189122.known	chr8	-	1251	4	FSM	ENSG00000181195.11	ENST00000451791.7	1251	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	3.85861230093008	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATATCCTTGTAAGTCTCT	-56446567	True	NA	NA	False	AATAAA	-19	NA	56446641	56440956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_56441938_56445815_56445957_56446425_56446482_56446568
transcript_189123.known	chr8	-	7224	5	FSM	ENSG00000104331.9	ENST00000262644.9	7224	5	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	14.1244468918255	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTGCTGCATCTGCT	-56991914	True	NA	-5	True	AATAAA	-19	NA	56993867	56957930	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_56964065_56966190_56966353_56978049_56978146_56980034_56980198_56993198
transcript_18913.known	chr1	+	2220	11	FSM	ENSG00000196352.17	ENST00000314754.12	2220	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	33.4089808285138	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATGTAGTATGTGAAATT	207320060	True	NA	4	True	AATAAA	-18	NA	207321700	207360501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_207321866_207322381_207322568_207324558_207324751_207325621_207325722_207326751_207326838_207331107_207331297_207336692_207336819_207337328_207337410_207339396_207339418_207340390_207340509_207359545
transcript_189130.known	chr8	+	3438	5	FSM	ENSG00000169122.12	ENST00000361488.7	3438	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	13.7931142241337	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTGGTTTCTCTTTGT	57993818	True	NA	11	True	AATAAA	-22	NA	57994553	58148788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_57994807_58031605_58031704_58043183_58043300_58075534_58075624_58145906
transcript_189131.known	chr8	+	578	4	FSM	ENSG00000169122.12	ENST00000519262.6	3349	4	-14	2785	-14	-38	multi-exon	FALSE	canonical	3	22	junction_2	4.64279609239471	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGTGGCCTTTTTGTGC	57993773	True	NA	NA	False	ATTAAA	-10	NA	57994508	58145999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_57994807_58031605_58031704_58075534_58075624_58145906
transcript_189135.known	chr8	+	1225	9	FSM	ENSG00000215114.10	ENST00000523409.5	1225	9	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_6	80.4129964620148	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTTCCAATCTGAATATA	58407246	True	NA	28	True	GATAAA	-21	NA	58411380	58447684	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_58411470_58416849_58416954_58430518_58430670_58433159_58433244_58434394_58434505_58434857_58434949_58439632_58439771_58445906_58446069_58447388
transcript_189137.known	chr8	+	4971	8	FSM	ENSG00000215114.10	ENST00000399598.7	4971	8	0	0	0	0	multi-exon	TRUE	canonical	3	174	junction_5	29.2372421156752	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAAAGGTTTTTCAAATT	58407226	True	NA	13	True	AATAAA	-22	NA	58411360	58451501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_58411470_58416849_58416954_58430518_58430670_58433159_58433244_58434394_58434505_58439632_58439771_58445906_58446069_58447388
transcript_18914.known	chr1	+	4139	20	FSM	ENSG00000117322.18	ENST00000367057.8	4139	20	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_10	6.72161107188314	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACACTTGCCTTATTTTGT	207453769	True	NA	NA	False	AATAAA	-23	NA	207454327	207489892	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_207454477_207466525_207466913_207468526_207468716_207468799_207468900_207469149_207469233_207469694_207470103_207470739_207470917_207470996_207471088_207471422_207471500_207472771_207473180_207473544_207473722_207473800_207473886_207474240_207474324_207474823_207475217_207476233_207476420_207477884_207478071_207479256_207479281_207479977_207480054_207485463_207485573_207489141
transcript_189142.known	chr8	+	717	7	FSM	ENSG00000215114.10	ENST00000522978.1	717	7	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	91.1604202613295	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAGGTTAGTTTGAAGT	58407224	True	NA	NA	False	NA	NA	NA	58411358	58434941	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_58411470_58413298_58413372_58416849_58416954_58430518_58430670_58433159_58433244_58434394_58434505_58434857
transcript_189143.nic	chr8	+	819	6	ISM	ENSG00000215114.10	ENST00000523409.5	1225	9	-32	12578	-10	0	5prime_fragment	FALSE	canonical	3	62	junction_5	71.8721086374958	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAAAGTGGAGTTATTTC	58407214	True	NA	NA	False	AATAAA	-27	NA	58411348	58435106	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_58411470_58416849_58416954_58430518_58430670_58433159_58433244_58434394_58434505_58434857
transcript_189145.nic	chr8	+	1605	3	ISM	ENSG00000215114.10	ENST00000522978.1	717	7	-4	16675	-4	-16675	5prime_fragment	FALSE	canonical	3	61	junction_1	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATAGTAATTCTGTGATG	58407220	True	NA	NA	False	NA	NA	NA	58411354	58418266	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_58411470_58413298_58413372_58416849
transcript_18915.known	chr1	+	4063	19	FSM	ENSG00000117322.18	ENST00000367058.7	4063	19	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_10	4.59468291736341	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGCCTTATTTTGTTTT	207453671	True	NA	NA	False	AATAAA	-26	NA	207454229	207489895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_207454477_207466525_207466913_207468526_207468716_207468799_207468900_207469149_207469233_207469694_207470103_207470739_207470917_207470996_207471088_207471422_207471500_207472771_207473180_207473800_207473886_207474240_207474324_207474823_207475217_207476233_207476420_207477884_207478071_207479256_207479281_207479977_207480054_207485463_207485573_207489141
transcript_189150.known	chr8	+	2073	9	FSM	ENSG00000137575.12	ENST00000260130.9	2073	9	0	0	0	0	multi-exon	FALSE	canonical	3	667	junction_4	92.6437228040842	929	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACTGCATCATTTGCTT	58543483	True	NA	26	True	AATAAA	-19	NA	58553260	58582858	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_58553304_58565018_58565085_58570886_58570966_58572204_58572315_58575899_58576062_58578032_58578209_58579622_58579795_58580516_58580609_58581685
transcript_189156.known	chr8	-	3371	31	FSM	ENSG00000035681.9	ENST00000427130.6	3371	31	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_30	24.3852414382142	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATTAAGAAATTTTCCAAG	-58659485	False	144	NA	False	GATAAA	-34	NA	58659534	58583769	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_58584201_58585651_58585762_58585897_58586001_58586457_58586609_58587617_58587702_58589451_58589576_58590006_58590075_58590866_58590935_58594231_58594291_58595559_58595660_58597386_58597551_58597859_58597903_58599231_58599364_58599749_58599871_58599969_58600022_58601284_58601349_58601444_58601536_58602057_58602138_58603209_58603387_58605926_58606036_58607768_58607841_58609603_58609734_58623219_58623273_58623376_58623425_58623708_58623781_58631495_58631547_58635188_58635226_58635304_58635373_58635467_58635547_58642983_58643074_58659194
transcript_189157.known	chr8	-	3574	31	FSM	ENSG00000035681.9	ENST00000038176.8	3574	31	0	0	0	0	multi-exon	TRUE	canonical	3	76	junction_24	18.7980199902957	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCTGTTTTCACTTTAT	-58659804	False	NA	NA	False	ATTAAA	-17	NA	58659853	58583507	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_58584201_58585651_58585762_58585897_58586001_58586457_58586609_58587617_58587702_58589451_58589576_58590006_58590075_58590866_58590935_58594231_58594291_58595559_58595660_58597386_58597551_58597859_58597903_58599231_58599364_58599749_58599871_58599969_58600022_58601284_58601349_58601444_58601536_58602057_58602138_58603209_58603387_58605926_58606036_58607768_58607841_58609603_58609734_58623219_58623273_58623376_58623425_58623708_58623781_58631495_58631547_58635188_58635226_58635304_58635373_58635467_58635547_58642983_58643074_58659572
transcript_18916.known	chr1	+	3877	18	FSM	ENSG00000117322.18	ENST00000367059.3	3877	18	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_13	6.32947736681507	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGCCTTATTTTGTTTT	207453671	True	NA	NA	False	AATAAA	-26	NA	207454229	207489895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_207454477_207466525_207466913_207468526_207468716_207468799_207468900_207469149_207469233_207469694_207470103_207470739_207470917_207470996_207471088_207471422_207471500_207472771_207473180_207473800_207473886_207474240_207474324_207474823_207475217_207477884_207478071_207479256_207479281_207479977_207480054_207485463_207485573_207489141
transcript_189167.known	chr8	-	582	6	FSM	ENSG00000035681.9	ENST00000522645.5	582	6	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_5	4.12795348811006	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAACAAAATTACCCAAGGG	-58659649	False	NA	NA	False	AATATA	-39	NA	58659698	58631364	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_58631547_58635188_58635226_58635304_58635373_58635467_58635547_58642983_58643074_58659572
transcript_189171.known	chr8	-	4076	9	FSM	ENSG00000198846.6	ENST00000361421.2	4076	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	5.8309518948453	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATTTGGTGATCCATCA	-59119081	False	NA	1	True	AATAAA	-44	NA	59119147	58805411	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_58807784_58808117_58808270_58815337_58815725_58826821_58826903_58838080_58838312_58851523_58851806_58939301_58939545_58959942_58960009_59118885
transcript_189177.nic	chr8	-	1072	5	ISM	ENSG00000198846.6	ENST00000361421.2	4076	9	-157	32838	-157	-32838	5prime_fragment	FALSE	canonical	3	41	junction_1	4.55521678957215	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAAGAAGGATCCCA	-59119238	False	66	NA	False	NA	NA	NA	59119304	58838249	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_58838312_58851523_58851806_58939301_58939545_58959942_58960009_59118885
transcript_189180.known	chr8	-	5735	9	FSM	ENSG00000178538.10	ENST00000317995.5	5735	9	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_1	9.73315853153538	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTGACTATTCATTTC	-60280774	True	NA	1	True	ATTAAA	-22	NA	60281400	60185411	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_60189986_60208749_60208920_60222648_60222762_60224536_60224586_60226872_60226936_60232283_60232380_60265924_60266050_60279688_60279881_60281047
transcript_189189.known	chr8	-	1825	8	FSM	ENSG00000178538.10	ENST00000524872.5	1825	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_4	7.586238884201	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGATTATTTATTTACC	-60280759	True	NA	NA	False	AATAAA	-43	NA	60281385	60208070	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_60208920_60222648_60222762_60224536_60224586_60226872_60226936_60232283_60232380_60265924_60266050_60279688_60279881_60281047
transcript_189200.known	chr8	+	3735	8	FSM	ENSG00000104388.15	ENST00000262646.12	3735	8	0	0	0	0	multi-exon	FALSE	canonical	3	896	junction_5	99.4769997003717	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGGATGTACTAGGTATTA	60501195	True	NA	20	True	AATAAA	-34	NA	60516986	60623644	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_60517254_60558851_60558924_60572045_60572114_60584207_60584291_60584722_60584816_60591857_60591970_60618579_60618649_60620673
transcript_189205.known	chr8	+	680	7	FSM	ENSG00000104388.15	ENST00000529579.5	680	7	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_5	394.553228348217	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATTCTTGTATAACTTTG	60516165	True	NA	-35	True	NA	NA	NA	60517180	60620895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_60517254_60558851_60558924_60572045_60572114_60584207_60584291_60584722_60584816_60618579_60618649_60620673
transcript_189208.known	chr8	+	1058	7	FSM	ENSG00000104388.15	ENST00000531289.5	1058	7	0	0	0	0	multi-exon	FALSE	canonical	1	34	junction_1	371.352333445685	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAATTGATGTGATTATT	60501144	True	NA	58	True	NA	NA	NA	60516935	60620988	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_60517254_60572045_60572114_60584207_60584291_60584722_60584816_60591857_60591970_60618579_60618649_60620673
transcript_18921.known	chr1	+	663	4	FSM	ENSG00000197721.17	ENST00000531844.5	663	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	5.8878405775519	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTCTGTGCAATCTGTA	207643643	True	NA	6	True	AATAAA	-14	NA	207645112	207684036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_207645331_207677388_207677569_207678197_207678298_207683871
transcript_189210.known	chr8	+	594	6	FSM	ENSG00000104388.15	ENST00000429861.5	594	6	0	0	0	0	multi-exon	FALSE	canonical	3	896	junction_5	104.851514056784	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCACCTTCTGTCAGAC	60517223	False	NA	NA	False	CATAAA	-35	NA	60517235	60592117	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_60517254_60558851_60558924_60572045_60572114_60584207_60584291_60584722_60584816_60591857
transcript_189211.nic	chr8	+	654	5	ISM	ENSG00000104388.15	ENST00000429861.5	594	6	-329	7311	-29	0	5prime_fragment	FALSE	canonical	3	963	junction_4	91.8068624885961	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAAGGTAAAAAGGCT	60516751	True	NA	-7	True	NA	NA	NA	60516906	60584806	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_60517254_60558851_60558924_60572045_60572114_60584207_60584291_60584722
transcript_189212.known	chr8	+	11606	38	FSM	ENSG00000171316.12	ENST00000423902.7	11606	38	0	0	0	0	multi-exon	TRUE	canonical	3	88	junction_15	28.7396311533614	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTTTGTAGTATTGGAAA	60675895	True	NA	23	True	AATAAA	-30	NA	60678739	60868028	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_60679083_60741258_60743098_60780999_60781431_60794985_60795128_60800387_60800526_60801527_60801594_60808216_60808273_60816386_60816502_60820006_60820091_60821789_60821928_60822023_60822146_60822502_60822747_60823839_60824017_60828662_60828807_60830321_60830578_60836072_60836284_60836816_60837013_60837667_60837836_60838075_60838256_60841643_60841755_60841846_60842053_60844863_60845064_60845249_60845410_60848514_60848605_60849050_60849155_60850492_60850623_60851031_60851105_60851261_60851320_60852018_60852248_60852497_60852707_60852828_60853501_60854362_60854524_60855974_60856203_60856444_60856889_60860903_60861126_60862195_60862337_60862547_60862653_60865015
transcript_18922.known	chr1	+	3371	14	FSM	ENSG00000117335.20	ENST00000358170.6	3371	14	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_6	325.560381696203	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATGTGTTTATTTCTA	207738350	True	NA	23	True	AATAAA	-24	NA	207752056	207795513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207767606_207767652_207767778_207767824_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207790252_207790346_207793518
transcript_189220.nic	chr8	+	2315	3	NIC	ENSG00000171316.12	novel	434	3	NA	NA	-123	0	intron_retention	FALSE	canonical	0	0	junction_1	67	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAGAAGAAAAAGAAAAACA	60677759	True	NA	NA	False	AATAGA	-19	NA	60679440	60781124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_60679792_60741258_60743098_60780999
transcript_189226.known	chr8	-	5301	25	FSM	ENSG00000198363.18	ENST00000379454.9	5301	25	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_22	182.864628133005	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCATTTCTAGTCTTCT	-61707307	True	NA	-7	True	AATAAA	-19	NA	61714592	61500555	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_61503510_61517527_61517662_61518031_61518124_61525976_61526113_61548070_61548209_61553030_61553121_61555923_61556023_61562743_61562881_61567167_61567319_61576771_61576859_61583943_61584030_61618977_61619020_61633682_61633728_61637946_61638004_61638321_61638364_61642887_61642921_61643385_61643434_61643944_61644002_61644599_61644633_61646749_61646879_61651049_61651125_61653567_61653661_61680967_61681037_61684038_61684189_61714268
transcript_189240.known	chr8	-	2874	15	FSM	ENSG00000198363.18	ENST00000519234.5	2874	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	223.564821901472	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGTCATTATTTTTGA	-61707240	True	NA	-12	True	AATAAA	-17	NA	61714525	61624536	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_61626281_61633682_61633728_61637946_61638004_61638321_61638361_61642887_61642921_61643385_61643434_61643944_61644002_61644599_61644633_61646749_61646879_61651049_61651125_61653567_61653661_61680967_61681037_61682438_61682484_61684038_61684189_61714268
transcript_189244.nic	chr8	-	1254	14	ISM	ENSG00000198363.18	ENST00000379454.9	5301	25	-64	118429	-16	4725	5prime_fragment	FALSE	canonical	0	0	junction_11	175.416157757394	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAAGGTGAGATTGTCAA	-61714645	False	NA	-7	True	AATAGA	-25	NA	61714656	61618984	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_61619020_61633682_61633728_61637946_61638004_61638321_61638364_61642887_61642921_61643385_61643434_61643944_61644002_61644599_61644633_61646749_61646879_61651049_61651125_61653567_61653661_61680967_61681037_61684038_61684189_61714268
transcript_189245.known	chr8	-	3730	14	FSM	ENSG00000198363.18	ENST00000356457.9	3730	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	153.053612450094	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAATATACTAATTTCTT	-61707311	True	NA	NA	False	AATAAA	-20	NA	61714596	61623709	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_61626281_61633682_61633728_61637946_61638004_61638321_61638364_61642887_61642921_61643385_61643434_61643944_61644002_61644599_61644633_61646749_61646879_61651049_61651125_61653567_61653661_61680967_61681037_61684038_61684189_61714268
transcript_18925.known	chr1	+	3278	13	FSM	ENSG00000117335.20	ENST00000322875.8	3278	13	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_6	278.463180789769	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATGTGTTTATTTCTA	207738350	True	NA	23	True	AATAAA	-24	NA	207752056	207795513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207767606_207767652_207767778_207767824_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207793518
transcript_189253.known	chr8	-	2744	13	FSM	ENSG00000198363.18	ENST00000518068.5	2744	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	193.752562707066	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATATTGTCATTATTTTT	-61707283	True	NA	-14	True	AATAAA	-15	NA	61714568	61624538	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_61626281_61633682_61633728_61637946_61638004_61638321_61638364_61642887_61642921_61643385_61643434_61643944_61644002_61644599_61644633_61651049_61651125_61653567_61653661_61680967_61681037_61684038_61684189_61714268
transcript_18926.known	chr1	+	3320	13	FSM	ENSG00000117335.20	ENST00000367042.6	3320	13	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_11	272.761138890585	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTCATGATGATGTGT	207738347	True	NA	14	True	AATAAA	-15	NA	207752053	207795504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207767778_207767824_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207790252_207790346_207793518
transcript_189269.known	chr8	-	6337	4	FSM	ENSG00000198363.18	ENST00000517856.5	6337	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	256.549323825957	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATGACTGAATTGAGCTT	-61707302	True	NA	-10	True	AATAAA	-20	NA	61714587	61656127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_61661927_61680967_61681037_61684038_61684189_61714268
transcript_189274.known	chr8	-	1449	9	FSM	ENSG00000137563.13	ENST00000677482.1	1449	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	169.461463170834	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTATGTGTGTGCATGTG	-63033663	True	NA	90	True	NA	NA	NA	63038867	63014880	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_63015454_63017492_63017631_63023906_63023940_63024079_63024187_63026157_63026297_63027180_63027266_63030166_63030218_63035655_63035771_63038659
transcript_189275.known	chr8	-	1248	9	FSM	ENSG00000137563.13	ENST00000260118.7	1248	9	0	0	0	0	multi-exon	FALSE	canonical	3	446	junction_1	39.6703210851639	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTTCTAATTGATTTG	-63033602	True	NA	-15	True	AATAAA	-17	NA	63038806	63015078	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_63015454_63017492_63017631_63023906_63023998_63024079_63024187_63026157_63026297_63027180_63027266_63030166_63030218_63035655_63035771_63038659
transcript_189276.known	chr8	-	3813	8	FSM	ENSG00000137563.13	ENST00000677327.1	3813	8	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_2	35.5119985471999	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATAGAGTGTTTTTCAT	NA	False	NA	-22	True	ATTAAA	-10	NA	63039407	63015153	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_63017631_63023906_63023998_63024079_63024187_63026157_63026297_63027180_63027266_63030166_63030218_63035655_63035771_63038659
transcript_189277.known	chr8	-	961	8	FSM	ENSG00000137563.13	ENST00000518113.2	961	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	173.195890039373	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAAGAGTTGAGTGGAA	-63033597	True	NA	-5	True	AATAAA	-17	NA	63038801	63023508	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_63023740_63023906_63023998_63024079_63024187_63026157_63026297_63027180_63027266_63030166_63030218_63035655_63035771_63038659
transcript_189281.known	chr8	+	2370	6	FSM	ENSG00000185728.17	ENST00000621413.4	2370	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	212.739841120557	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTTGTAATTATGCAT	63152625	True	NA	NA	False	NA	NA	NA	63168660	63209955	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_63168902_63169386_63169412_63172652_63172799_63175330_63175417_63186146_63187746_63209682
transcript_189282.known	chr8	+	5095	5	FSM	ENSG00000185728.17	ENST00000539294.6	5095	5	0	0	0	0	multi-exon	FALSE	canonical	3	396	junction_2	38.3169348982927	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTGTTCTTTCCATTT	63152585	True	NA	12	True	AATAAA	-14	NA	63168620	63212786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_63168902_63169386_63169412_63175330_63175417_63186146_63187746_63209682
transcript_189283.known	chr8	+	2387	5	FSM	ENSG00000185728.17	ENST00000621957.4	2387	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	180.626686843334	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTGTCGATTTTTAGCT	63152616	True	NA	NA	False	NA	NA	NA	63168651	63210115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_63168902_63169386_63169412_63175336_63175417_63186146_63187746_63209682
transcript_189291.known	chr8	-	3000	7	FSM	ENSG00000104442.10	ENST00000276569.8	3000	7	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_4	14.8772757362809	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTTGTGGTATAAGCAT	-65630638	True	NA	-14	True	AATAAA	-32	NA	65634177	65602457	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_65604586_65605262_65605338_65605421_65605539_65613243_65613434_65622262_65622355_65627215_65627434_65633997
transcript_189295.known	chr8	-	887	6	FSM	ENSG00000104442.10	ENST00000528721.5	887	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	75.1009986618021	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTGTGTGAACCAACAAGG	-65630632	True	NA	NA	False	NA	NA	NA	65634171	65604374	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_65604586_65605262_65605338_65605421_65605539_65622262_65622355_65627215_65627434_65633997
transcript_189299.known	chr8	-	507	3	FSM	ENSG00000104442.10	ENST00000523384.1	507	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	103	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTCACGTCGAAGGAAAG	-65630651	True	NA	NA	False	NA	NA	NA	65634190	65613337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_65613434_65627215_65627434_65633997
transcript_18930.known	chr1	+	3233	12	FSM	ENSG00000117335.20	ENST00000354848.5	3233	12	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_6	171.944926797041	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATGTGTTTATTTCTA	207738350	True	NA	23	True	AATAAA	-24	NA	207752056	207795513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207767778_207767824_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207793518
transcript_189306.known	chr8	+	2651	8	FSM	ENSG00000066855.16	ENST00000262146.9	2651	8	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	17.7798326476824	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATAGTGCTTCCATTTTTT	65640536	True	NA	15	True	AATAAA	-29	NA	65644733	65710562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_65644785_65669872_65670019_65682352_65682452_65693643_65693760_65704693_65704930_65707009_65707257_65707842_65708012_65708975
transcript_189316.nic	chr8	-	3716	14	NIC	ENSG00000205268.11	novel	6961	13	NA	NA	-2	694	intron_retention	FALSE	canonical	3	43	junction_12	117.166245113867	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTATCTTTGACATTT	-65838357	True	NA	-20	True	AATAAA	-15	NA	65842066	65717684	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_65719496_65723540_65723622_65724254_65724352_65724776_65724922_65726874_65726967_65727169_65727302_65734793_65734895_65739501_65739598_65745406_65745471_65747651_65747804_65779719_65779804_65780843_65780948_65782782_65782844_65841370
transcript_18932.known	chr1	+	3281	12	FSM	ENSG00000117335.20	ENST00000367041.5	3281	12	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_10	307.388950585653	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATGTGTTTATTTCTA	207738350	True	NA	23	True	AATAAA	-24	NA	207752056	207795513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207790252_207790346_207793518
transcript_189321.known	chr8	-	6961	13	FSM	ENSG00000205268.11	ENST00000401827.8	6961	13	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_11	33.2615894589139	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAATTAATGTGTTCCC	-65838355	True	NA	NA	False	AATAAA	-20	NA	65842064	65714333	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_65719496_65723540_65723622_65724254_65724352_65724776_65724922_65726874_65726967_65727169_65727302_65734793_65734895_65739501_65739598_65745406_65745471_65747651_65747804_65779719_65779804_65782782_65782844_65841370
transcript_189324.known	chr8	-	2986	12	FSM	ENSG00000205268.11	ENST00000396642.7	2986	12	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_10	33.1497977506514	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGACAAAAGAGAATTGAAT	-65841065	False	3709	NA	False	AATGAA	-40	NA	65841508	65721797	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_65723622_65724254_65724352_65724776_65724922_65726874_65726967_65727169_65727302_65734793_65734895_65739501_65739598_65745406_65745471_65747651_65747804_65779719_65779804_65782782_65782844_65841370
transcript_189329.nic	chr8	-	3167	7	ISM	ENSG00000205268.11	ENST00000396642.7	2986	12	-538	11063	18	-5951	5prime_fragment	FALSE	canonical	3	302	junction_5	38.2597119115599	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTCACTCAAAGTTTTA	-65838337	True	NA	NA	False	AAAAAG	-18	NA	65842046	65732860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_65734895_65739501_65739598_65745406_65745471_65747651_65747804_65779719_65779804_65782782_65782844_65841370
transcript_189331.known	chr8	+	2229	14	FSM	ENSG00000147576.17	ENST00000424777.6	2229	14	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	8.44754086971837	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTAAGTATTCATTATTGG	66432374	True	NA	9	True	AATAAA	-14	NA	66432497	66468809	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_66432576_66440161_66440200_66442797_66442845_66444366_66444421_66444593_66444749_66445217_66445415_66447263_66447342_66448864_66448971_66451952_66452106_66453709_66454158_66456816_66456896_66457069_66457167_66460307_66460466_66468268
transcript_189332.known	chr8	+	1972	14	FSM	ENSG00000147576.17	ENST00000396623.8	1972	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	9.7337332062358	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTCCATAATATACTGGG	66432380	True	NA	107	True	AATAAA	-23	NA	66432503	66468907	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_66432576_66440161_66440200_66442797_66442845_66444366_66444421_66444593_66444749_66445217_66445415_66447263_66447342_66448864_66448971_66451952_66452106_66454058_66454158_66456816_66456896_66457069_66457167_66460307_66460466_66468268
transcript_189336.known	chr8	+	1720	1	FSM	ENSG00000179041.4	ENST00000320270.4	1720	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	194	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGACTACTGGGTAGA	66422198	True	NA	33	True	AATAAA	-27	NA	66429013	66430733	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_66429000_66430700
transcript_189339.known	chr8	-	9956	3	FSM	ENSG00000175073.8	ENST00000310421.5	9956	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	11	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCTTTAATTGATTTT	-66663078	True	NA	NA	False	ATTAAA	-22	NA	66667231	66628486	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_66635373_66651457_66651545_66664248
transcript_189344.known	chr8	+	2949	19	FSM	ENSG00000288602.1	ENST00000519289.1	2949	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	19.2736146641522	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAACAAAAGGAAATTATTT	66666052	True	NA	NA	False	AAAAAG	-6	NA	66667615	66860472	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_66667702_66679720_66680025_66690704_66690761_66793615_66793833_66798541_66798626_66804374_66804448_66813852_66813929_66822371_66822460_66828653_66828704_66831253_66831312_66835762_66835847_66835942_66836075_66840002_66840116_66840210_66840248_66841023_66841111_66843451_66843548_66847192_66847349_66850830_66850921_66859410
transcript_189345.known	chr8	+	598	4	FSM	ENSG00000288596.2	ENST00000521889.5	598	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	11.3137084989848	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGAGTTGTTTGTGTTTTT	66666088	False	NA	3	True	AATAAA	-15	NA	66667651	66678295	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_66667702_66676744_66676903_66677641_66677955_66678218
transcript_189346.nic	chr8	+	940	3	ISM	ENSG00000288596.2	ENST00000521889.5	598	4	-78	0	-41	0	intron_retention	FALSE	canonical	3	35	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGAGTTGTTTGTGTTTTT	66666010	True	NA	3	True	AATAAA	-15	NA	66667573	66678295	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_66667702_66676744_66676903_66677641
transcript_189348.known	chr8	+	575	3	FSM	ENSG00000288596.2	ENST00000521113.1	575	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	4.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAATGTTAATCGTTTTGA	66666051	True	NA	18	True	AATAAA	-19	NA	66667614	66685564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_66667702_66679720_66680025_66685380
transcript_189349.known	chr8	+	4190	17	FSM	ENSG00000104205.16	ENST00000396596.2	4190	17	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_8	8.07363572066513	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAATGTCTGTCATTATT	66774281	True	NA	4	True	AATAAA	-16	NA	66775180	66862020	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_66775320_66793615_66793833_66798541_66798626_66804374_66804448_66813852_66813929_66822371_66822460_66828653_66828704_66831253_66831312_66835762_66835847_66835942_66836075_66840002_66840116_66840210_66840248_66841023_66841111_66843451_66843548_66847192_66847349_66850830_66850921_66859410
transcript_189355.known	chr8	-	638	4	FSM	ENSG00000245910.9	ENST00000520944.6	639	4	1	0	1	0	multi-exon	FALSE	canonical	3	651	junction_3	86.5036929205273	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGGGGAGACATTGCTT	-66908793	True	NA	96	True	NA	NA	NA	66925596	66921817	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_66922115_66922323_66922393_66922613_66922726_66925436
transcript_189357.known	chr8	-	302	3	FSM	ENSG00000245910.9	ENST00000521399.6	366	3	4	60	0	-1	multi-exon	FALSE	canonical	3	174	junction_2	330.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTGGCTAACTTTTAAT	-66908738	True	NA	-73	True	AATAAA	-17	NA	66925541	66921986	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_66922115_66922323_66922393_66925436
transcript_189358.known	chr8	-	648	3	FSM	ENSG00000245910.9	ENST00000686474.1	1806	3	35	1123	0	134	multi-exon	FALSE	canonical	3	71	junction_1	290	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTCACCTTTTTTATTCA	-66908738	True	NA	NA	False	GATAAA	-1	NA	66925541	66921683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_66922115_66922613_66922726_66925436
transcript_189363.known	chr8	-	560	2	FSM	ENSG00000245910.9	ENST00000521127.1	560	2	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTAAGGGTGGGGGCAG	-66908738	True	NA	NA	False	NA	NA	NA	66925541	66922270	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_66922726_66925436
transcript_189368.known	chr8	+	3844	26	FSM	ENSG00000104218.16	ENST00000677009.1	3844	26	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_25	13.8525954246849	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAATTAATTATTATTTC	67062085	True	NA	NA	False	NA	NA	NA	67064361	67196047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_67064497_67074242_67074352_67076481_67076582_67086006_67086111_67093542_67093642_67095292_67095733_67103036_67103136_67105904_67105976_67111971_67112066_67113804_67113863_67115913_67116123_67118247_67118370_67118742_67118822_67131950_67132081_67137455_67137604_67149782_67149936_67154023_67154137_67158446_67158597_67158990_67159138_67161810_67161916_67163731_67163799_67164390_67164509_67172415_67172556_67175295_67175437_67177679_67177727_67195381
transcript_189376.known	chr8	+	4348	29	FSM	ENSG00000104218.16	ENST00000675869.1	4348	29	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_16	16.4347814350032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTACTAAAATCTTTTTAA	67062069	True	NA	NA	False	AATAAA	-11	NA	67064345	67196252	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_67064539_67074242_67074352_67076481_67076582_67086006_67086111_67091802_67091884_67093542_67093642_67095292_67095733_67103036_67103136_67105904_67105976_67111971_67112066_67113804_67113863_67115913_67116123_67118247_67118370_67118742_67118822_67131950_67132081_67137455_67137604_67154023_67154137_67158446_67158597_67158990_67159138_67161810_67161916_67163731_67163799_67164390_67164509_67172415_67172556_67175295_67175437_67177679_67177727_67179862_67179927_67190649_67190760_67193463_67193603_67195381
transcript_189377.known	chr8	+	4476	30	FSM	ENSG00000104218.16	ENST00000262210.11	4476	30	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	13.3495937314321	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTTAACTACTATGGAG	67062063	True	NA	NA	False	AATAAA	-22	NA	67064339	67196263	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_67064497_67074242_67074352_67076481_67076582_67086006_67086111_67091802_67091884_67093542_67093642_67095292_67095733_67103036_67103136_67105904_67105976_67111971_67112066_67113804_67113863_67115913_67116123_67118247_67118370_67118742_67118822_67131950_67132081_67137455_67137604_67149782_67149936_67154023_67154137_67158446_67158597_67158990_67159138_67161810_67161916_67163731_67163799_67164390_67164509_67172415_67172556_67175295_67175437_67177679_67177727_67179862_67179927_67190649_67190760_67193463_67193603_67195381
transcript_189381.known	chr8	+	4302	18	FSM	ENSG00000104218.16	ENST00000678156.1	4302	18	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_7	17.8985994310084	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTATAATTGTTCCTATG	67062059	True	NA	NA	False	TATAAA	-3	NA	67064335	67166342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_67064539_67074242_67074352_67076481_67076582_67086006_67086111_67091802_67091884_67093542_67093642_67095292_67095733_67118247_67118370_67118742_67118822_67131950_67132081_67137455_67137604_67149782_67149936_67154023_67154137_67158446_67158597_67158990_67159138_67161810_67161916_67163731_67163799_67164390
transcript_189382.known	chr8	+	4399	24	FSM	ENSG00000104218.16	ENST00000677619.1	4399	24	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_6	14.1105545770742	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTGTGGAGCACTTACC	67062085	True	NA	NA	False	ATTAAA	-15	NA	67064361	67196778	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_67064539_67074242_67074352_67076481_67076582_67086006_67086111_67093542_67093642_67095292_67095733_67118247_67118370_67118742_67118822_67131950_67132081_67137455_67137604_67149782_67149936_67154023_67154137_67158446_67158597_67158990_67159138_67161810_67161916_67163731_67163799_67164390_67164509_67172415_67172556_67175295_67175437_67177679_67177727_67179862_67179927_67190649_67190760_67193463_67193603_67195381
transcript_189386.known	chr8	+	2765	7	FSM	ENSG00000104218.16	ENST00000678927.1	2765	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	17.2143351115671	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTTGGAAATGGCAATTA	67062091	True	NA	NA	False	AATGAA	-7	NA	67064367	67097393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_67064539_67074242_67074352_67076481_67076582_67086006_67086111_67091802_67091884_67093542_67093642_67095292
transcript_189387.nic	chr8	+	744	6	ISM	ENSG00000104218.16	ENST00000678553.1	1934	15	-11	42119	-5	1881	5prime_fragment	FALSE	canonical	3	35	junction_1	7.68374908491942	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAGGAATAGAAGAATTAT	67062080	True	NA	NA	False	NA	NA	NA	67064356	67095484	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_67064497_67074242_67074352_67076481_67076582_67086006_67086111_67093542_67093642_67095292
transcript_189390.known	chr8	+	682	4	FSM	ENSG00000104218.16	ENST00000677071.1	682	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	15.8605030044938	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCAGTGGATTCTAATTT	67062114	True	NA	NA	False	NA	NA	NA	67064390	67086331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_67064539_67074242_67074352_67076481_67076582_67086006
transcript_189391.known	chr8	+	2329	14	FSM	ENSG00000104218.16	ENST00000678723.1	2329	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	21.713573863849	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTAAAATCTTTTTAACT	NA	False	NA	NA	False	AATAAA	-13	NA	67154023	67196254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_67154137_67158446_67158597_67158990_67159138_67161810_67161916_67163731_67163799_67164390_67164509_67172415_67172556_67175295_67175437_67177679_67177727_67179862_67179927_67190649_67190760_67192688_67192804_67193463_67193603_67195381
transcript_189395.nic	chr8	-	1247	9	NIC	ENSG00000121022.14	novel	1451	10	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_8	219.789636641494	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCCTTTGATTTTTTTGT	-67055466	True	NA	NA	False	AATAAA	-17	NA	67062165	67043078	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_67043318_67045811_67045961_67051229_67051342_67056518_67056605_67057379_67057446_67058082_67058212_67059210_67059446_67061853_67062025_67062105
transcript_189396.known	chr8	-	1296	8	FSM	ENSG00000121022.14	ENST00000357849.9	1296	8	0	0	0	0	multi-exon	FALSE	canonical	3	645	junction_7	43.1367072248692	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCCTTTGATTTTTTTGT	-67055434	True	NA	NA	False	AATAAA	-17	NA	67062133	67043078	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_67043318_67045811_67045961_67051229_67051342_67056518_67056605_67057379_67057446_67058082_67058212_67059210_67059446_67061853
transcript_1894.known	chr1	-	2612	6	FSM	ENSG00000116237.16	ENST00000489498.5	2612	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	178.367037313513	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATGGCTTAATGAATTT	-6226720	True	NA	20	True	NA	NA	NA	6235972	6223490	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6225263_6231901_6232120_6233473_6233644_6234404_6234512_6234885_6234975_6235716
transcript_18940.known	chr1	+	1258	11	FSM	ENSG00000117335.20	ENST00000480003.5	1258	11	0	0	0	0	multi-exon	FALSE	canonical	2	41	junction_7	257.275027937031	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTTGTTATTCTGTAGTT	207738416	True	NA	NA	False	ATTAAA	-8	NA	207752122	207793646	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207767778_207767824_207783291_207783331_207785070_207785107_207785618_207785683_207793518
transcript_189400.known	chr8	-	7320	39	FSM	ENSG00000066777.9	ENST00000262215.8	7320	39	0	0	0	0	multi-exon	TRUE	canonical	3	153	junction_34	56.6389217016315	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTATAACCCACCCCCAT	-67340066	True	NA	-14	True	AATAAA	-33	NA	67343781	67197657	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_67199099_67200395_67200514_67201466_67201606_67203082_67203252_67204679_67204820_67211482_67211616_67216589_67216663_67217781_67217921_67218002_67218139_67219430_67219561_67224902_67225034_67226022_67226184_67227136_67227310_67227446_67227599_67227962_67228133_67228223_67228265_67232854_67232946_67238342_67238494_67238734_67238894_67240161_67240291_67251298_67251451_67253450_67253623_67257731_67257817_67258084_67258291_67259814_67259927_67266005_67266208_67266875_67266985_67267090_67267231_67267342_67267443_67271701_67271937_67275975_67276110_67277281_67277458_67287954_67288066_67291846_67292124_67296430_67296611_67299208_67299356_67301223_67301381_67302435_67302467_67343163
transcript_189403.nic	chr8	-	3322	18	ISM	ENSG00000066777.9	ENST00000262215.8	7320	39	-186	55849	-186	45807	5prime_fragment	FALSE	canonical	3	153	junction_13	27.6191348343235	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATATCAATGAAAGAAACAA	-67343955	False	NA	NA	False	AATGAA	-15	NA	67343967	67253506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_67253623_67257731_67257817_67258084_67258291_67259814_67259927_67266005_67266208_67266875_67266985_67267090_67267231_67267342_67267443_67271701_67271937_67275975_67276110_67277281_67277458_67287954_67288066_67291846_67292124_67296430_67296611_67299208_67299356_67301223_67301381_67302435_67302467_67343163
transcript_189406.nic	chr8	-	2618	15	NIC	ENSG00000066777.9	novel	7320	39	NA	NA	-196	33286	combination_of_known_junctions	TRUE	canonical	3	54	junction_14	39.2605113963387	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAGAACAAGGGATAGAT	-67343965	False	NA	NA	False	AAAAAG	-4	NA	67343977	67266027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_67266208_67266875_67266985_67267090_67267231_67267342_67267443_67271701_67271937_67275975_67276110_67277281_67277458_67287954_67288066_67291846_67292124_67296430_67296611_67299208_67299356_67301223_67301381_67302435_67302467_67343163_67343337_67343509
transcript_189407.nic	chr8	-	2898	14	ISM	ENSG00000066777.9	ENST00000262215.8	7320	39	-303	68370	-303	33286	5prime_fragment	FALSE	canonical	3	153	junction_9	20.8712593643896	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAGAACAAGGGATAGAT	-67344045	True	NA	NA	False	AAAAAG	-4	NA	67344084	67266027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_67266208_67266875_67266985_67267090_67267231_67267342_67267443_67271701_67271937_67275975_67276110_67277281_67277458_67287954_67288066_67291846_67292124_67296430_67296611_67299208_67299356_67301223_67301381_67302435_67302467_67343163
transcript_18941.known	chr1	+	3188	11	FSM	ENSG00000117335.20	ENST00000357714.5	3188	11	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_6	222.804420961524	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATGTGTTTATTTCTA	207738350	True	NA	23	True	AATAAA	-24	NA	207752056	207795513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207793518
transcript_189413.known	chr8	-	2011	11	FSM	ENSG00000165078.13	ENST00000297770.10	2011	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.66332495807108	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTGGGCTGAGGCGGGC	NA	False	NA	NA	False	AATAAA	-39	NA	67746360	67422037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_67422692_67428046_67428132_67434037_67434241_67483767_67483859_67484678_67484790_67506786_67506889_67509516_67509619_67511540_67511656_67517922_67518048_67624175_67624252_67746013
transcript_189414.known	chr8	+	550	2	FSM	ENSG00000255130.1	ENST00000526382.1	550	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTGGCAGTCTTTTTTTT	67732518	False	NA	NA	False	ATTAAA	-18	NA	67732586	67735665	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_67732666_67735194
transcript_189417.nnic	chr8	+	3145	19	NNC	ENSG00000046889.19	novel	3612	24	NA	NA	-125	-20618	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_18	14.7309198626562	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTCCTTATTCTAATGTA	67951813	True	NA	0	True	AATAAA	-13	NA	67951920	68085389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_67952536_68017845_68017918_68019548_68019672_68022035_68022141_68027221_68027324_68030496_68030659_68038158_68038293_68044486_68044591_68053096_68053247_68055829_68055975_68060678_68060780_68069032_68069137_68069834_68069885_68072494_68072571_68077396_68077470_68080442_68080586_68080745_68080839_68083239_68083389_68084745
transcript_189423.known	chr8	+	5710	23	FSM	ENSG00000137573.14	ENST00000260128.8	5710	23	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	22.8424354985219	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTGTTTCAGAGAAATGA	69464973	True	NA	NA	False	AATAAA	-16	NA	69466623	69660912	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_69466951_69495764_69495927_69501873_69501969_69563538_69563612_69563915_69564148_69575969_69576210_69586356_69586509_69588971_69589142_69600602_69600754_69601653_69601830_69603191_69603321_69603599_69603657_69604802_69604933_69621034_69621252_69623941_69624198_69627209_69627307_69627771_69627867_69628170_69628237_69629503_69629680_69638501_69638645_69638734_69638859_69640807_69640842_69658504
transcript_189425.known	chr8	+	5551	22	FSM	ENSG00000137573.14	ENST00000458141.6	5551	22	0	0	0	0	multi-exon	FALSE	canonical	2	37	junction_11	16.6977940618098	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTTTCAGAGAAATGAACT	69464973	True	NA	NA	False	AATAAA	-19	NA	69466623	69660915	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_69466951_69501873_69501969_69563538_69563612_69563915_69564148_69575969_69576210_69586356_69586509_69588971_69589142_69600602_69600754_69601653_69601830_69603191_69603321_69603599_69603657_69604802_69604933_69621034_69621252_69623941_69624198_69627209_69627307_69627771_69627867_69628170_69628237_69629503_69629680_69638501_69638645_69638734_69638859_69640807_69640842_69658504
transcript_18943.nic	chr1	+	3832	11	NIC	ENSG00000117335.20	novel	3371	14	NA	NA	-20	0	intron_retention	FALSE	canonical	3	384	junction_10	148.428467619928	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCATGATGATGTGTTT	207738327	True	NA	16	True	AATAAA	-17	NA	207752033	207795506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767824_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207793518
transcript_189453.nic	chr8	-	1882	4	ISM	ENSG00000137571.11	ENST00000260126.9	8991	10	-112	88487	-112	5832	5prime_fragment	FALSE	canonical	2	5	junction_3	3.74165738677394	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTTGATGCTGTTAG	-69835048	True	NA	NA	False	AAAAAG	-37	NA	69835090	69755532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_69755642_69761742_69761876_69831766_69833170_69834853
transcript_189454.known	chr8	-	3725	8	FSM	ENSG00000137571.11	ENST00000524945.5	3725	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.17844827439767	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAGGAAGCTGAACTTT	-69832967	True	NA	NA	False	AATAAA	-16	NA	69833390	69672342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_69673327_69679377_69679620_69682183_69682344_69705030_69705230_69738039_69738205_69755423_69755642_69761742_69761876_69831766
transcript_189456.known	chr8	+	1256	2	FSM	ENSG00000246528.4	ENST00000528800.3	1298	2	39	3	-24	-3	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTCTTTCCTGATCTTC	69834047	True	NA	NA	False	AATAAA	-21	NA	69834128	69837829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_69834194_69836638
transcript_189474.known	chr8	-	8430	23	FSM	ENSG00000140396.13	ENST00000452400.7	8430	23	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_22	11.1281045440723	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGCTTTAGAGATTTTAA	-70402960	True	NA	-20	True	AATAAA	-22	NA	70403808	70109781	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_70113644_70121301_70121392_70123883_70124083_70124687_70124866_70126812_70127048_70128432_70128511_70128701_70128981_70131836_70132003_70138202_70138333_70141183_70141400_70144641_70144849_70148272_70148484_70155970_70157241_70159504_70159653_70162710_70162855_70163464_70163567_70166565_70166755_70170201_70170380_70174755_70174860_70213902_70214076_70216659_70216765_70296743_70296801_70403699
transcript_189482.known	chr8	-	3056	11	FSM	ENSG00000067167.8	ENST00000262213.7	3056	11	0	0	0	0	multi-exon	FALSE	canonical	3	716	junction_6	40.2055966253456	266	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAAGGTGTCTCTTTATT	-70599412	True	NA	NA	False	AATAAA	-26	NA	70608416	70573217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_70575006_70583163_70583325_70583649_70583794_70586894_70587000_70587105_70587177_70594505_70594591_70596262_70596322_70597894_70598012_70598133_70598256_70600018_70600083_70608076
transcript_189491.known	chr8	-	1526	7	FSM	ENSG00000147592.9	ENST00000276590.5	1526	7	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_5	31.5669482563998	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATATGATAAATAATTATT	-70666531	True	NA	99	True	ATTAAA	-17	NA	70669185	70637265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_70637904_70638547_70638630_70640901_70641051_70644064_70644244_70657755_70657883_70661733_70661898_70668998
transcript_189495.nic	chr8	-	927	6	ISM	ENSG00000147592.9	ENST00000276590.5	1526	7	-42	1285	-42	0	5prime_fragment	FALSE	canonical	3	212	junction_4	33.1867443416796	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGAGTATGCTTCCAAA	-70666573	True	NA	NA	False	AAAAAG	-10	NA	70669227	70638550	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_70638630_70640901_70641051_70644064_70644244_70657755_70657883_70661733_70661898_70668998
transcript_189497.nnic	chr8	+	788	4	NIC	ENSG00000254277.2	novel	473	3	NA	NA	-193	1	combination_of_known_splicesites	FALSE	canonical	3	109	junction_2	46.54985380094	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGGAAACAACAAAAATGTT	71675093	False	NA	NA	False	AGTAAA	-16	NA	71675106	71702436	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_71675536_71695940_71696034_71697626_71697671_71702214
transcript_18950.nnic	chr1	+	2336	4	NNC	ENSG00000117335.20	novel	3081	10	NA	NA	-20	0	intron_retention	FALSE	canonical	2	8	junction_2	265.678167881535	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCATGATGATGTGTTT	207738327	True	NA	16	True	AATAAA	-17	NA	207752033	207795506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_207752310_207757013_207757059_207785655_207785683_207793518
transcript_189501.known	chr8	+	473	3	FSM	ENSG00000254277.2	ENST00000521131.1	473	3	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	54	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTGGAAACAACAAAAATGT	71663462	False	NA	NA	False	AGTAAA	-15	NA	71675376	71702435	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_71675536_71695940_71696034_71702214
transcript_189503.nnic	chr8	+	519	3	FSM	ENSG00000254277.2	ENST00000693596.1	452	3	-66	-1	-17	1	multi-exon	FALSE	canonical	3	67	junction_1	73.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGGAAACAACAAAAATGTT	71663368	True	NA	NA	False	AGTAAA	-16	NA	71675282	71702436	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_71675536_71697626_71697671_71702214
transcript_18951.nic	chr1	+	654	4	ISM	ENSG00000117335.20	ENST00000480003.5	1258	11	-89	33922	-20	0	5prime_fragment	FALSE	canonical	3	656	junction_1	46.5068692656138	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTAAATTCTTTTTTTT	207738327	True	NA	NA	False	NA	NA	NA	207752033	207759724	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638
transcript_189513.known	chr8	+	808	2	FSM	ENSG00000254277.2	ENST00000519840.1	808	2	0	0	0	0	multi-exon	FALSE	canonical	3	731	junction_1	0	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTTTTGTGTTTTCAGT	71663385	True	NA	NA	False	NA	NA	NA	71675299	71702786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_71675536_71702214
transcript_189517.known	chr8	-	1956	2	FSM	ENSG00000178860.9	ENST00000325509.5	1956	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCCTTGGAGGTGTCAGG	-71844136	True	NA	-17	True	AATAAA	-43	NA	71844412	71841559	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_71842748_71843644
transcript_18952.nic	chr1	+	2660	4	ISM	ENSG00000117335.20	ENST00000480003.5	1258	11	-89	31916	-20	2006	intron_retention	FALSE	canonical	3	656	junction_1	46.5068692656138	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACACACTGGCTTAAAGAAA	207738327	True	NA	NA	False	NA	NA	NA	207752033	207761730	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638
transcript_189520.known	chr8	+	2764	11	FSM	ENSG00000147601.15	ENST00000679115.1	2764	11	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_9	2054.7239230612	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACATACCTTACTAAACA	72959185	True	NA	NA	False	AATAAA	-7	NA	73008859	73047479	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026939_73027053_73030335_73030396_73032041_73032134_73039115_73039220_73039544_73039620_73045960
transcript_189523.known	chr8	+	3329	10	FSM	ENSG00000147601.15	ENST00000276603.10	3329	10	0	0	0	0	multi-exon	FALSE	canonical	3	1645	junction_7	1424.6238836537	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTCCAGTCTGAGTATT	72959189	True	NA	10	True	AATATA	-15	NA	73008863	73048123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026939_73027053_73030335_73030396_73032041_73032134_73039115_73039220_73045960
transcript_189527.known	chr8	+	3429	10	FSM	ENSG00000147601.15	ENST00000676483.1	3429	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	2100.41630794152	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTCTCCAGTCTGAGTAT	72959189	True	NA	9	True	AATATA	-14	NA	73008863	73048122	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026939_73027053_73030794_73030956_73032041_73032134_73039115_73039220_73045960
transcript_189529.known	chr8	+	2715	10	FSM	ENSG00000147601.15	ENST00000678860.1	2715	10	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_8	2013.86725812138	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACATACCTTACTAAACA	72959189	True	NA	NA	False	AATAAA	-7	NA	73008863	73047479	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026939_73027053_73032041_73032134_73038705_73038796_73039115_73039220_73045960
transcript_189533.known	chr8	+	2933	10	FSM	ENSG00000147601.15	ENST00000678997.1	2933	10	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	2048.54521701935	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATCCTATATATAAACAGAA	72959189	True	NA	-14	True	NA	NA	NA	73008863	73047711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_73009206_73012855_73012932_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026939_73027053_73032041_73032134_73039115_73039220_73045960
transcript_189539.known	chr8	+	3268	9	FSM	ENSG00000147601.15	ENST00000276602.10	3268	9	0	0	0	0	multi-exon	FALSE	canonical	3	3332	junction_6	606.236082314473	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTCTCCAGTCTGAGTAT	72959189	True	NA	9	True	AATATA	-14	NA	73008863	73048122	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026939_73027053_73032041_73032134_73039115_73039220_73045960
transcript_189547.nic	chr8	+	1145	8	ISM	ENSG00000147601.15	ENST00000677031.1	1934	10	-104	10666	-96	3635	5prime_fragment	FALSE	canonical	3	1645	junction_7	1542.84104488956	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAGTAGGAACTCCTCAA	73008739	False	NA	-17	True	AAGAAA	-5	NA	73008759	73032112	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026939_73027053_73030335_73030396_73032041
transcript_189556.nic	chr8	+	1085	7	ISM	ENSG00000147601.15	ENST00000678860.1	2715	10	-104	15367	-96	3635	5prime_fragment	FALSE	canonical	3	3332	junction_6	675.431323098227	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAGTAGGAACTCCTCAA	73008739	False	NA	-17	True	AAGAAA	-5	NA	73008759	73032112	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026939_73027053_73032041
transcript_189561.known	chr8	+	2331	6	FSM	ENSG00000147601.15	ENST00000522018.2	2331	6	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_5	2020.9140902077	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATCACTCCCAGCTTAAAA	72959189	True	NA	NA	False	AATAAA	-8	NA	73008863	73028477	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026943
transcript_189570.known	chr8	+	4052	4	FSM	ENSG00000147601.15	ENST00000678358.1	4052	4	0	0	0	0	multi-exon	FALSE	canonical	3	4819	junction_1	270.241044666095	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTGAGATTGCGCCACT	72959181	True	NA	NA	False	NA	NA	NA	73008855	73025699	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215
transcript_18958.nic	chr1	+	981	5	NIC	ENSG00000230937.13	novel	1007	5	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	81	junction_3	28.7402157263998	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	209418098	True	NA	20	True	ACTAAA	-21	NA	209428816	209432549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_209429089_209429180_209429409_209430424_209430477_209431742_209431826_209432203
transcript_189580.known	chr8	+	3598	1	FSM	ENSG00000147601.15	ENST00000518695.2	3598	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATACAAAAAAAATT	72959233	True	NA	NA	False	NA	NA	NA	73008907	73012505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_73008900_73012500
transcript_189581.known	chr8	-	3698	5	FSM	ENSG00000164764.11	ENST00000297354.7	3698	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	1.29903810567666	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATTCTAGTGAAGGTTC	-73093140	True	NA	NA	False	AATAAA	-20	NA	73093172	73064542	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_73067459_73069804_73069982_73071779_73071871_73081018_73081214_73092853
transcript_189585.nnic	chr8	-	1058	7	NNC	ENSG00000147604.14	novel	1233	7	NA	NA	0	-357	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	13454.8536151664	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTGTTGTATTTGTGAT	-73216371	True	NA	-25	True	AATAAA	-24	NA	73293633	73290640	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_-_73290706_73291042_73291253_73291551_73291662_73291772_73291911_73292238_73292406_73292688_73292798_73293374
transcript_189587.known	chr8	-	1233	7	FSM	ENSG00000147604.14	ENST00000352983.7	1233	7	0	0	0	0	multi-exon	FALSE	canonical	3	22642	junction_1	5489.87466968863	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGTTCTTGTTTTGC	-73216371	True	NA	0	True	TATAAA	-38	NA	73293633	73290241	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_73290706_73291042_73291253_73291551_73291662_73291772_73291911_73292238_73292406_73292688_73292798_73293598
transcript_189588.nic	chr8	-	1421	7	NIC	ENSG00000147604.14	novel	1233	7	NA	NA	-49	-357	combination_of_known_junctions	FALSE	canonical	3	48	junction_6	13438.3558693846	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTGTTGTATTTGTGAT	-73294470	False	NA	-25	True	AATAAA	-24	NA	73294487	73290640	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_73290706_73291042_73291253_73291551_73291662_73291772_73291911_73292238_73292406_73292688_73292798_73293865
transcript_18959.known	chr1	+	798	5	FSM	ENSG00000230937.13	ENST00000657184.2	809	5	1	10	0	-10	multi-exon	FALSE	canonical	3	28	junction_4	50.4894791020862	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAAGGCAGATTGCAGAT	209418101	True	NA	10	True	AATAAA	-21	NA	209428819	209432838	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_209429089_209429180_209429409_209430424_209430477_209431742_209431826_209432672
transcript_189590.known	chr8	+	3959	6	FSM	ENSG00000121039.10	ENST00000240285.10	3959	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	7.80768851837725	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTGTAGAAGTCTTTC	73294407	True	NA	4	True	AATAAA	-14	NA	73294601	73325281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_73295579_73297193_73297430_73319095_73319195_73320931_73321078_73322678_73322811_73322912
transcript_189596.nic	chr8	-	506	5	ISM	ENSG00000147604.14	ENST00000352983.7	1233	7	-1	1364	-1	177	5prime_fragment	FALSE	canonical	3	28563	junction_4	3917.25477854071	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATAAGAAGCGAATTGCT	-73216372	True	NA	NA	False	AGTAAA	-33	NA	73293634	73291605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_73291662_73291772_73291911_73292238_73292406_73292688_73292798_73293598
transcript_18960.known	chr1	+	1007	5	FSM	ENSG00000230937.13	ENST00000429156.6	1007	5	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	35.688758734369	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTGCCTCTATGTTTTA	209418098	True	NA	22	True	ACTAAA	-23	NA	209428816	209432551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_209429089_209429180_209429409_209430424_209430501_209431742_209431826_209432203
transcript_189602.known	chr8	-	2970	15	FSM	ENSG00000040341.18	ENST00000524300.6	2970	15	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_12	137.123826804648	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTGTTGTTGTTCTTTTG	-73742413	True	NA	-4	True	AGTAAA	-24	NA	73746840	73420368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_73421466_73422613_73422703_73552011_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73709031_73709163_73738283_73738350_73739755_73739869_73746782
transcript_189604.nic	chr8	-	2960	14	NIC	ENSG00000040341.18	novel	2970	15	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	3	126	junction_1	113.636657557447	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTGTTGTTGTTCTTTTG	-73746932	False	398	-4	True	AGTAAA	-24	NA	73746961	73420368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_73421466_73422613_73422703_73552011_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73738283_73738350_73739755_73739869_73746782
transcript_18961.nic	chr1	+	825	5	NIC	ENSG00000230937.13	novel	1007	5	NA	NA	0	-10	combination_of_known_junctions	FALSE	canonical	3	28	junction_4	53.0023584380922	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAAGGCAGATTGCAGAT	209418098	True	NA	10	True	AATAAA	-21	NA	209428816	209432838	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_209429089_209429180_209429409_209430424_209430501_209431742_209431826_209432672
transcript_189610.nic	chr8	-	2683	13	NIC	ENSG00000040341.18	novel	4061	12	NA	NA	3	534	combination_of_known_junctions	FALSE	canonical	3	78	junction_1	105.375090615488	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTATTGTTTCTTAATAAA	-73742473	True	NA	-3	True	AATAAA	-17	NA	73746900	73526834	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_73527805_73552011_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73738283_73738350_73739755_73739869_73746782
transcript_189616.nic	chr8	-	1876	13	ISM	ENSG00000040341.18	ENST00000524300.6	2970	15	-60	131611	3	-84	5prime_fragment	FALSE	canonical	3	121	junction_10	115.964673739702	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTCATTAGCCTCAGATT	-73742473	True	NA	NA	False	ATTAAA	-21	NA	73746900	73551979	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73709031_73709163_73738283_73738350_73739755_73739869_73746782
transcript_189621.known	chr8	-	4061	12	FSM	ENSG00000040341.18	ENST00000355780.9	4061	12	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_2	45.3677352857587	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTGTTTTAACTTTTAA	-73742413	True	NA	-19	True	AGTAAA	-23	NA	73746840	73549603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73738283_73738350_73739755_73739869_73746782
transcript_18963.known	chr1	+	1072	4	FSM	ENSG00000230937.13	ENST00000451937.6	1072	4	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	25.4209012865835	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	209418099	True	NA	20	True	ACTAAA	-21	NA	209428817	209432549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_209429409_209430424_209430477_209431742_209431826_209432203
transcript_189633.known	chr8	-	1695	10	FSM	ENSG00000040341.18	ENST00000517542.5	1695	10	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_9	125.355888435415	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGATCTATCTAGTAAT	-73742452	True	NA	NA	False	AAAAAG	-29	NA	73746879	73551829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73746782
transcript_189637.known	chr8	-	1041	7	FSM	ENSG00000040341.18	ENST00000522962.5	1041	7	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_4	176.419953520003	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGAATTACAGTTAACCA	-73742391	True	NA	NA	False	AGTAAA	-8	NA	73746818	73653497	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_73653897_73673106_73673243_73688653_73688814_73709031_73709163_73738283_73738350_73739755_73739869_73746782
transcript_18964.known	chr1	+	849	4	FSM	ENSG00000230937.13	ENST00000458250.6	849	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	46.9964537669244	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTATATTGTAATAAAGT	209418104	True	NA	1	True	ATTAAA	-14	NA	209428822	209432800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_209429409_209430424_209430477_209431742_209431826_209432672
transcript_189640.known	chr8	-	2173	6	FSM	ENSG00000040341.18	ENST00000524104.5	2173	6	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	138.278559437101	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCTAGTAAGTAATGCAT	-73742413	True	NA	-3	True	ATTAAA	-29	NA	73746840	73652256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_73653897_73673106_73673243_73688653_73688814_73738283_73738350_73739755_73739869_73746782
transcript_189644.known	chr8	-	8426	6	FSM	ENSG00000104343.21	ENST00000517608.5	8426	6	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_5	31.5467906450086	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTTTTGGCTTTTTTTA	-73872790	True	NA	-3	True	AATAAA	-17	NA	73878910	73786219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_73794116_73805650_73805727_73810473_73810630_73825146_73825250_73830380_73830473_73878807
transcript_189648.known	chr8	-	3903	5	FSM	ENSG00000104343.21	ENST00000422906.6	3903	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	97.7941076957094	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTATGGTTACTGCTGC	-73872755	True	NA	-12	True	AATAAA	-24	NA	73878875	73790604	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_73794116_73805650_73805727_73810473_73810630_73830380_73830473_73878807
transcript_189649.known	chr8	-	850	5	FSM	ENSG00000104343.21	ENST00000523278.5	850	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	116.558997936667	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAGTTTGAACTACTTTG	NA	False	NA	NA	False	AATAAA	-21	NA	73830474	73780096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_73780518_73805650_73805727_73810473_73810630_73825146_73825250_73830380
transcript_18965.known	chr1	+	1094	4	FSM	ENSG00000230937.13	ENST00000670788.1	1094	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	33.1360830515618	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	209418101	True	NA	20	True	ACTAAA	-21	NA	209428819	209432549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_209429409_209430424_209430501_209431742_209431826_209432203
transcript_189653.known	chr8	-	719	6	FSM	ENSG00000154582.18	ENST00000523815.5	719	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	1781.98496065483	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTGAACTATATAAAGTTC	-73971894	False	26019	45	True	NA	NA	NA	73971908	73946533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73964486_73964626_73970578_73970635_73971869
transcript_189655.known	chr8	-	634	5	FSM	ENSG00000154582.18	ENST00000519082.5	634	5	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_4	1756.52049518359	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGAATTCCCAATTGCAC	-73946233	True	NA	-121	True	NA	NA	NA	73972252	73946699	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73964486_73964626_73972076
transcript_189657.known	chr8	-	816	5	FSM	ENSG00000154582.18	ENST00000522337.5	816	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	1847.14365643282	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAAATTTGTTTGCTAC	-73946213	True	NA	-82	True	NA	NA	NA	73972232	73946472	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73969559_73969674_73972076
transcript_189664.known	chr8	-	1976	5	FSM	ENSG00000154582.18	ENST00000622804.2	1992	5	44	-28	0	-19	multi-exon	FALSE	canonical	3	18	junction_4	1850.40738757712	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-73971894	False	26019	NA	False	NA	NA	NA	73971908	73945137	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73970578_73970635_73971869
transcript_18967.known	chr1	+	704	4	FSM	ENSG00000230937.13	ENST00000366437.7	704	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	69.8872107200038	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	209418292	False	NA	20	True	ACTAAA	-21	NA	209429010	209432549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_209429089_209429180_209429409_209430424_209430477_209432203
transcript_189672.known	chr8	-	2015	4	FSM	ENSG00000154582.18	ENST00000520242.6	2015	4	0	0	0	0	multi-exon	FALSE	canonical	3	2357	junction_3	664.922551881044	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGACTGGCCTAATATG	-73946172	True	NA	NA	False	NA	NA	NA	73972191	73945118	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73972076
transcript_189673.known	chr8	-	1943	4	FSM	ENSG00000154582.18	ENST00000518127.5	1943	4	0	0	0	0	multi-exon	FALSE	canonical	3	755	junction_3	1408.27767148386	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGACTGGCCTAATATG	-73946268	True	NA	NA	False	NA	NA	NA	73972287	73945118	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73972244
transcript_189675.known	chr8	-	814	4	ISM	ENSG00000154582.18	ENST00000622804.2	1992	5	1315	1098	1271	137	3prime_fragment	FALSE	canonical	3	45	junction_3	1740.99058648294	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTTTAGAAACCTAATCT	-73970623	False	NA	NA	False	NA	NA	NA	73970637	73946263	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_73946821_73955910_73956055_73959764_73959819_73970578
transcript_189677.known	chr8	-	683	4	FSM	ENSG00000154582.18	ENST00000284811.12	683	4	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	1721.28756716851	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTAGGTGGTTTTGCCTT	-73946087	True	NA	-10	True	AATAAA	-13	NA	73972106	73946400	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73972041
transcript_18968.known	chr1	+	916	4	FSM	ENSG00000230937.13	ENST00000667171.1	916	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	68.0049017841116	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	209418104	True	NA	20	True	ACTAAA	-21	NA	209428822	209432549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_209429089_209429180_209429409_209430424_209430501_209432203
transcript_189684.known	chr8	-	1451	3	FSM	ENSG00000154582.18	ENST00000520210.1	1451	3	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_2	1899.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCATTCAGCTTTTCTATT	-73946151	True	NA	2	True	AATAAA	-37	NA	73972170	73945607	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_73946821_73955910_73956055_73972076
transcript_189688.known	chr8	+	928	4	FSM	ENSG00000175606.11	ENST00000416961.6	928	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	132.467186712618	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGTGAAGAGAAACGGCAT	73970272	True	NA	NA	False	AAGAAA	-1	NA	73976194	73981586	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_73976492_73978755_73978862_73979078_73979172_73981154
transcript_18969.known	chr1	+	908	4	FSM	ENSG00000230937.13	ENST00000431096.6	926	4	18	0	1	0	multi-exon	FALSE	canonical	3	42	junction_2	45.536310297998	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	209418119	True	NA	20	True	ACTAAA	-21	NA	209428837	209432549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_209429089_209429180_209429409_209431742_209431826_209432203
transcript_189691.known	chr8	+	2032	3	FSM	ENSG00000175606.11	ENST00000312184.6	2032	3	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_2	11	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTGTAAAATTGCTGTC	73970272	True	NA	10	True	ATTAAA	-14	NA	73976194	73982783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_73976492_73978755_73978862_73981154
transcript_189695.known	chr8	+	2471	7	FSM	ENSG00000104381.14	ENST00000434412.3	2471	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	58.2248992175074	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTAGCAGCTTTTATAA	74346824	True	NA	16	True	AATAAA	-31	NA	74350402	74365834	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_74350579_74351273_74351322_74351453_74351467_74360136_74360311_74361883_74361979_74362938_74363054_74363984
transcript_189697.known	chr8	+	3504	7	FSM	ENSG00000104381.14	ENST00000675661.1	3504	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	74.1881991214835	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAATAAAAGTAATTGGAAA	74346865	True	NA	NA	False	NA	NA	NA	74350443	74366833	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_74350579_74351273_74351322_74360136_74360311_74361883_74361979_74362263_74362352_74362938_74363054_74363984
transcript_189698.known	chr8	+	3500	6	FSM	ENSG00000104381.14	ENST00000675625.1	3500	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	52.1359760626	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAAGTACTCACTTTG	74346816	True	NA	NA	False	AATAAA	-28	NA	74350394	74366868	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_74350579_74351273_74351322_74360136_74360311_74361883_74361979_74362938_74363054_74363984
transcript_189700.known	chr8	+	3616	6	FSM	ENSG00000104381.14	ENST00000675165.1	3616	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	54.9312297331855	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATATGAACCCTAA	74346824	True	NA	NA	False	AATAAA	-10	NA	74350402	74366850	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_74350579_74351273_74351467_74360136_74360311_74361883_74361979_74362938_74363054_74363987
transcript_189706.known	chr8	+	945	6	FSM	ENSG00000104381.14	ENST00000676207.1	945	6	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_5	52.6513057767801	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTATCTTATTTTGTAT	74346834	True	NA	NA	False	AATAAA	-25	NA	74350412	74488879	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_74350579_74351273_74351467_74360136_74360311_74361883_74361979_74362938_74363054_74488677
transcript_189707.known	chr8	+	3606	5	FSM	ENSG00000104381.14	ENST00000675821.1	3606	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	67.4291294619766	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATGAACCCTAAAACAAAG	74320569	True	NA	NA	False	AATAAA	-17	NA	74320612	74366857	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_74320962_74360136_74360311_74361883_74361979_74362938_74363054_74363984
transcript_189708.known	chr8	+	3407	5	FSM	ENSG00000104381.14	ENST00000675220.1	3407	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	68.2582412606712	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTAATTGGAAAATAAATAT	74320983	True	NA	NA	False	AATAAA	-1	NA	74321079	74366841	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_74321246_74360136_74360311_74361883_74361979_74362938_74363054_74363984
transcript_189709.known	chr8	+	4137	5	FSM	ENSG00000104381.14	ENST00000674944.1	4137	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	48.882512210401	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCCAAAATTTGTATAAAT	74346824	True	NA	NA	False	NA	NA	NA	74350402	74366582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_74350579_74351273_74351322_74360136_74360311_74361883_74361979_74362938
transcript_189710.known	chr8	+	2378	5	FSM	ENSG00000104381.14	ENST00000675928.1	2378	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	65.9786897414612	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTCCCGATTTACAAAAAA	74346816	True	NA	-43	True	NA	NA	NA	74350394	74365775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_74350579_74351273_74351467_74361883_74361979_74362938_74363054_74363984
transcript_189713.known	chr8	-	4590	6	FSM	ENSG00000104369.5	ENST00000342232.5	4590	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	29.9799933288852	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGAGGTGTGTTTTCTTT	-74320174	True	NA	NA	False	AATAAA	-22	NA	74321540	74234699	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_74237036_74237207_74237304_74244528_74245176_74259384_74259504_74314860_74315621_74320908
transcript_189714.nnic	chr8	-	3111	6	NNC	ENSG00000104369.5	novel	4590	6	NA	NA	-73	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.1660503101647	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTTGGAGGTGTGTTTT	-74320247	False	NA	NA	False	AATAAA	-18	NA	74321613	74234703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_-_74235488_74237207_74237304_74244528_74245176_74259384_74259504_74314860_74315621_74320908
transcript_189715.nnic	chr8	-	4233	6	NNC	ENSG00000104369.5	novel	4590	6	NA	NA	-73	-4	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	37.7221420388609	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTTGGAGGTGTGTTTT	-74320247	False	NA	NA	False	AATAAA	-18	NA	74321613	74234703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_-_74236610_74237207_74237304_74244528_74245176_74259384_74259504_74314860_74315621_74320908
transcript_189717.nnic	chr8	-	4376	6	NNC	ENSG00000104369.5	novel	4590	6	NA	NA	-73	-7	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	36.2248533468391	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGAAGTTGGAGGTGTGT	-74320247	False	NA	NA	False	AATAAA	-15	NA	74321613	74234706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_-_74236756_74237207_74237304_74244528_74245176_74259384_74259504_74314860_74315621_74320908
transcript_189719.nic	chr8	-	4828	5	NIC	ENSG00000104369.5	novel	4590	6	NA	NA	-73	-7	intron_retention	FALSE	canonical	3	94	junction_1	14.5688022843335	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGAAGTTGGAGGTGTGT	-74320247	False	NA	NA	False	AATAAA	-15	NA	74321613	74234706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_74237304_74244528_74245176_74259384_74259504_74314860_74315621_74320908
transcript_189720.nic	chr8	-	1304	2	ISM	ENSG00000104369.5	ENST00000342232.5	4590	6	-73	80322	-73	-77789	5prime_fragment	FALSE	canonical	3	103	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAGGGAAAATACAAAAA	-74320247	False	NA	-71	True	NA	NA	NA	74321613	74315021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_74315621_74320908
transcript_189721.known	chr8	-	590	2	FSM	ENSG00000253596.1	ENST00000521872.1	590	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTTTTATTTCTTTATG	-74350005	False	NA	NA	False	AATATA	-2	NA	74350050	74347756	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_74348206_74349909
transcript_189724.known	chr8	+	4297	15	FSM	ENSG00000121005.9	ENST00000262207.9	4297	15	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_14	26.309868560551	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACCATTGTAATTATTT	74983020	True	NA	64	True	ATTAAA	-27	NA	74984504	75034558	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_74984921_74985925_74986246_75012432_75012552_75012889_75013023_75013986_75014103_75014811_75014913_75016564_75016706_75016880_75016942_75017046_75017114_75017319_75017451_75019869_75019914_75020006_75020080_75025545_75025622_75029386_75029518_75032190
transcript_189731.nic	chr8	+	1603	7	ISM	ENSG00000121005.9	ENST00000262207.9	4297	15	-369	17965	-369	4043	5prime_fragment	FALSE	canonical	3	177	junction_5	8.31497978884428	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGGAAACAAATGAAAT	NA	False	NA	NA	False	NA	NA	NA	74984135	75016593	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_74984921_74985925_74986246_75012432_75012552_75012889_75013023_75013986_75014103_75014811_75014913_75016564
transcript_189733.known	chr8	-	1704	2	FSM	ENSG00000249395.4	ENST00000669950.1	1704	2	0	0	0	0	multi-exon	TRUE	canonical	2	19	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATAGCTAATGGAAGTG	-75324366	True	NA	-10	True	AATAAA	-20	NA	75324692	75223126	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_75224359_75324220
transcript_189739.known	chr8	-	1627	3	FSM	ENSG00000164751.15	ENST00000522527.5	1627	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	90	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGGATTCTAAAGATAAAG	-77000255	False	NA	-51	True	AAAACA	-3	NA	77000267	76982956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_76984196_76986186_76986297_76999989
transcript_189743.known	chr8	-	1470	3	FSM	ENSG00000164751.15	ENST00000520103.5	1470	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAGACTCTGGGATGAGT	NA	False	NA	-28	True	GATAAA	-5	NA	77000947	76982933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_76984196_76999989_77000133_77000882
transcript_189745.known	chr8	+	3962	4	FSM	ENSG00000171033.13	ENST00000396418.7	3962	4	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_2	36.9173250505625	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGTCTATTAAGAGTATT	78513256	True	NA	9	True	ATTAAA	-25	NA	78516339	78605267	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_78516469_78572810_78572940_78598357_78598536_78601741
transcript_189746.known	chr8	+	1736	3	FSM	ENSG00000171033.13	ENST00000352966.9	1736	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	96.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAGTGGTAATAAATAAGG	78513271	True	NA	-23	True	NA	NA	NA	78516354	78603185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_78516469_78598357_78598536_78601741
transcript_189750.known	chr8	+	3310	9	FSM	ENSG00000104427.12	ENST00000263849.9	3310	9	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_7	25.8647322622911	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAGTTCGTATTCACTGA	78662936	True	NA	14	True	AATAAA	-18	NA	78666088	78719765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_78666165_78675786_78675864_78678562_78678680_78686466_78686609_78689221_78689374_78697406_78697507_78698413_78698514_78715220_78715329_78717327
transcript_189756.nic	chr8	+	874	8	ISM	ENSG00000104427.12	ENST00000263849.9	3310	9	-27	4462	-27	-2199	5prime_fragment	FALSE	canonical	3	61	junction_7	27.6302112085408	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATATACTGAGAGCTACATA	78662909	True	NA	NA	False	AAGAAA	-36	NA	78666061	78715303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_78666165_78675786_78675864_78678562_78678680_78686466_78686609_78689221_78689374_78697406_78697507_78698413_78698514_78715220
transcript_189758.known	chr8	+	981	3	FSM	ENSG00000104427.12	ENST00000521873.1	981	3	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_2	3	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCTCCCATGTGCTTTA	78662936	True	NA	NA	False	NA	NA	NA	78666088	78679390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_78666165_78675786_78675864_78678562
transcript_189759.known	chr8	+	1903	5	FSM	ENSG00000104435.14	ENST00000220876.12	1903	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	1.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGGTTTGGTCTGTTCTC	79610856	True	NA	NA	False	AATAAA	-23	NA	79611116	79666158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_79611215_79636801_79636898_79641377_79641551_79654870_79655063_79664814
transcript_189762.known	chr8	-	2296	5	FSM	ENSG00000164683.18	ENST00000337919.9	2296	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	7.53325958665968	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTCTGTGGTGTATGTCT	-79767415	True	NA	NA	False	AATAAA	-15	NA	79767857	79764012	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_79765772_79766650_79766733_79766996_79767093_79767218_79767295_79767574
transcript_189763.known	chr8	+	571	3	FSM	ENSG00000272138.3	ENST00000607754.3	618	3	0	47	0	-43	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTTTGTGGATGTATTAT	79783595	True	NA	NA	False	ATTAAA	-14	NA	79783638	79802799	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_79783767_79800560_79800691_79802486
transcript_189765.known	chr8	-	487	4	FSM	ENSG00000147586.10	ENST00000518271.1	487	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	276.529684964683	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGTTGCGGCTATTAGATC	-80023676	False	NA	NA	False	NA	NA	NA	80030232	79919124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_79919149_80002998_80003181_80028694_80028797_80030053
transcript_18977.nic	chr1	+	846	3	FSM	ENSG00000230937.13	ENST00000692388.1	843	3	-3	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	62.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	209418098	True	NA	20	True	ACTAAA	-21	NA	209428816	209432549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_209429089_209429180_209429409_209432203
transcript_189770.known	chr8	-	403	3	FSM	ENSG00000147586.10	ENST00000519120.1	403	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	266.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAATGAACTTTGCT	-80023408	False	6556	NA	False	AGTAAA	-29	NA	80029964	79918987	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_79919149_80002998_80003181_80029904
transcript_189771.known	chr8	-	838	3	FSM	ENSG00000147586.10	ENST00000276585.9	838	3	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_2	191	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCATGGTACTAGTTTAA	-80023703	True	NA	-4	True	AATAAA	-21	NA	80030259	79918716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_79919149_80002998_80003181_80030035
transcript_189779.known	chr8	-	437	2	FSM	ENSG00000147586.10	ENST00000521605.1	437	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGATTGACTCCTTTGCTG	-80023733	True	NA	NA	False	AATAAA	-14	NA	80030289	79918965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_79919149_80030035
transcript_18978.nic	chr1	+	1019	3	NIC	ENSG00000230937.13	novel	1072	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	42	junction_1	32.5	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	209418100	True	NA	20	True	ACTAAA	-21	NA	209428818	209432549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_209429409_209431742_209431826_209432203
transcript_189782.nic	chr8	-	2397	7	NIC	ENSG00000076554.16	novel	2702	9	NA	NA	-117	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	471.83003648913	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATAGGTCTCAATATTTA	-80171675	False	NA	-44	True	AATAAA	-15	NA	80171690	80036590	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_80038236_80042619_80042669_80051526_80051629_80052605_80052676_80053281_80053431_80064477_80064594_80171424
transcript_189786.known	chr8	-	4041	6	FSM	ENSG00000076554.16	ENST00000379096.9	4041	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	389.694752338288	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACGTGATCTTTCACTTT	-80162376	True	NA	1	True	AATACA	-23	NA	80171558	80034744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_80038236_80042619_80042669_80051526_80051629_80053281_80053431_80064477_80064594_80171424
transcript_18979.known	chr1	+	523	2	FSM	ENSG00000230937.13	ENST00000444286.1	523	2	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAGGCAAAGAATCTTGC	209429063	False	NA	NA	False	NA	NA	NA	209429082	209430621	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_209429409_209430424
transcript_189790.known	chr8	-	10744	9	FSM	ENSG00000076641.4	ENST00000220597.4	10744	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.39194109070751	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTGTTAAAATTTATTTG	-81112032	True	NA	NA	False	AATAAA	-18	NA	81112068	80967809	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_80976907_80980434_80980495_80984775_80985378_80987369_80987467_80991478_80991531_80993102_80993308_81029995_81030090_81070111_81070171_81111590
transcript_189791.known	chr8	+	676	4	FSM	ENSG00000164687.11	ENST00000297258.11	676	4	0	0	0	0	multi-exon	FALSE	canonical	3	1969	junction_2	232.626070956995	414	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATCTTGTATGCATTCTT	81274885	True	NA	NA	False	AATAAA	-19	NA	81280535	81284775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_81280675_81283365_81283539_81283872_81283975_81284513
transcript_189792.known	chr8	-	1180	10	FSM	ENSG00000133731.10	ENST00000449740.6	1180	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_9	63.7926811855365	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTAAATTCTCTTTGTCC	-81683929	True	NA	NA	False	NA	NA	NA	81686283	81659261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_81659467_81660515_81660668_81670938_81671048_81673840_81673950_81676233_81676280_81679125_81679231_81680649_81680784_81681497_81681585_81685762_81685964_81686251
transcript_189794.known	chr8	-	3369	9	FSM	ENSG00000133731.10	ENST00000256108.10	3369	9	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_2	15.352117117844	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAATTGTGTTCATTCTAT	-81683971	True	NA	NA	False	CATAAA	-44	NA	81686325	81656913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_81659467_81660515_81660668_81670938_81671048_81673840_81673950_81676233_81676280_81679125_81679231_81680649_81680784_81681497_81681585_81686251
transcript_189797.known	chr8	-	1106	8	FSM	ENSG00000133731.10	ENST00000311489.8	1106	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	65.212681876695	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTGAAATTTTGACTTAG	-81683947	True	NA	NA	False	NA	NA	NA	81686301	81659043	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_81659467_81660515_81660668_81673840_81673950_81676233_81676280_81679125_81679231_81680649_81680784_81681497_81681585_81686251
transcript_189801.known	chr8	-	2184	8	FSM	ENSG00000104231.11	ENST00000220669.10	2184	8	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_5	52.9146405418526	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTAATAATATCTGAGCCT	-81717138	True	NA	NA	False	AGTAAA	-23	NA	81721300	81701336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_81702866_81702968_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81717248_81717289_81718181_81718225_81721226
transcript_189810.known	chr8	-	1705	7	FSM	ENSG00000104231.11	ENST00000522520.5	1705	7	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_5	95.9073627112237	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCTATAGGTTTACTTAA	-81717127	True	NA	-53	True	NA	NA	NA	81721289	81701764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_81702866_81702968_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81718181_81718225_81721226
transcript_189811.known	chr8	-	772	7	FSM	ENSG00000104231.11	ENST00000521287.5	772	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	150.368436404276	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGTCAGAAATCACAGGGA	-81717133	True	NA	NA	False	NA	NA	NA	81721295	81702681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_81702866_81702968_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81718181_81718225_81721248
transcript_189820.known	chr8	-	698	7	FSM	ENSG00000104231.11	ENST00000519523.5	698	7	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_4	51.6346675101999	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGCATGTTTATTTATT	-81717126	True	NA	-3	True	AATAAA	-18	NA	81721288	81702913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81717248_81717289_81718181_81718225_81721226
transcript_189821.known	chr8	-	633	6	FSM	ENSG00000104231.11	ENST00000517588.5	633	6	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_4	99.7484836977485	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGCATGTTTATTTATT	-81717101	True	NA	-3	True	AATAAA	-18	NA	81721263	81702913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81718181_81718225_81721226
transcript_189822.known	chr8	-	664	6	FSM	ENSG00000104231.11	ENST00000520604.5	664	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	150.840312914022	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAATAACAAATTTACAGC	-81732003	True	NA	-82	True	NA	NA	NA	81732345	81702992	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81718181_81718225_81732198
transcript_189823.known	chr8	+	1852	5	FSM	ENSG00000164695.5	ENST00000297265.5	1852	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	6.34428877022476	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCCGTTATTATTTTT	81731523	True	NA	NA	False	AATAAA	-2	NA	81732447	81759515	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_81732817_81753063_81753242_81755369_81755485_81758141_81758296_81758479
transcript_189826.known	chr8	-	1778	8	FSM	ENSG00000104231.11	ENST00000523096.5	1778	8	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_2	117.569085204906	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTATTTCCTTTCTA	-81717138	True	NA	-10	True	AATAAA	-14	NA	81721300	81701721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_81702866_81702968_81703104_81713917_81714040_81714803_81714896_81714986_81715115_81717248_81717289_81718181_81718225_81721226
transcript_189828.known	chr8	-	3109	8	FSM	ENSG00000104497.15	ENST00000345957.9	3109	8	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_7	7.74069553379661	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAGCTGTGTTGTTCATA	-81841533	True	NA	-2	True	AATAAA	-18	NA	81842185	81799582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_81801594_81802379_81802500_81803091_81803229_81815324_81815395_81823791_81823941_81829429_81829517_81839611_81840083_81842121
transcript_189835.known	chr8	+	2385	15	FSM	ENSG00000133739.16	ENST00000517875.5	2385	15	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_5	16.1908263267462	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGATCACAGAAATAGAA	85105609	True	NA	17	True	AAAAAG	-25	NA	85107237	85138074	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_85107400_85110114_85110181_85112931_85113100_85115099_85115276_85115374_85115585_85123412_85123607_85124791_85124940_85126688_85126838_85129174_85129380_85129918_85130059_85131759_85131962_85134846_85135033_85135788_85135964_85137463_85137628_85138034
transcript_189845.nic	chr8	+	1380	9	ISM	ENSG00000133739.16	ENST00000517875.5	2385	15	-22	8815	1	-2671	5prime_fragment	FALSE	canonical	3	41	junction_5	15.2970585407784	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGACTGTTGAACTAATGAA	85105587	True	NA	NA	False	ATTAAA	-4	NA	85107215	85129259	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_85107400_85110114_85110181_85112931_85113100_85115099_85115276_85115374_85115585_85123412_85123607_85124791_85124940_85126688_85126838_85129174
transcript_189846.nic	chr8	+	1576	9	ISM	ENSG00000133739.16	ENST00000517875.5	2385	15	-133	8730	-110	-2586	5prime_fragment	FALSE	canonical	3	41	junction_5	15.2970585407784	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAGAGACAAAAAAGGCAG	NA	False	NA	NA	False	AAAACA	-11	NA	85107104	85129344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_85107400_85110114_85110181_85112931_85113100_85115099_85115276_85115374_85115585_85123412_85123607_85124791_85124940_85126688_85126838_85129174
transcript_18985.known	chr1	+	971	2	FSM	ENSG00000230937.13	ENST00000419143.1	971	2	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACTTTGCGTCCTTCCTA	209429485	False	NA	NA	False	NA	NA	NA	209429511	209431286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_209429621_209430424
transcript_189853.known	chr8	+	1964	8	FSM	ENSG00000133740.11	ENST00000416274.7	1964	8	0	0	0	0	multi-exon	FALSE	canonical	2	212	junction_6	80.7950291459436	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTCTTTGTGGAGA	85175737	True	NA	12	True	AATAAA	-19	NA	85177153	85214518	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_85177655_85202146_85202257_85203093_85203256_85206176_85206221_85207424_85207490_85209141_85209410_85212156_85212205_85213752
transcript_189854.known	chr8	+	1890	8	FSM	ENSG00000133740.11	ENST00000418930.6	1890	8	0	0	0	0	multi-exon	FALSE	canonical	2	194	junction_6	85.1816785896295	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTCTTTGTGGAGA	85175808	False	NA	12	True	AATAAA	-19	NA	85177224	85214518	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_85177655_85202146_85202257_85203093_85203256_85206176_85206221_85207424_85207490_85209141_85209410_85212159_85212205_85213752
transcript_189857.known	chr8	-	483	5	FSM	ENSG00000176731.12	ENST00000615697.4	483	5	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_4	554.178220430937	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGATGCATCTAATTCT	-85201934	True	NA	-69	True	AATATA	-1	NA	85220353	85214555	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_85214632_85214920_85215038_85217385_85217503_85219235_85219361_85220305
transcript_189858.known	chr8	-	475	5	FSM	ENSG00000176731.12	ENST00000612809.4	475	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	615.085563153615	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATTTTTAAAAATCTTG	-85201956	True	NA	-15	True	AATAAA	-18	NA	85220375	85214501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_85214632_85214920_85215038_85217385_85217503_85219322_85219364_85220305
transcript_189859.known	chr8	-	887	4	FSM	ENSG00000176731.12	ENST00000619594.5	887	4	0	0	0	0	multi-exon	FALSE	canonical	3	650	junction_3	407.259404093045	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATCAGAGCCCTTTGTTT	-85201955	True	NA	NA	False	ATTAAA	-17	NA	85220374	85214047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_85214632_85214920_85215038_85217385_85217503_85220305
transcript_189861.known	chr8	-	491	4	FSM	ENSG00000176731.12	ENST00000545322.5	491	4	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	331.078037125187	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATTTTTAAAAATCTTG	-85202002	True	NA	-15	True	AATAAA	-18	NA	85220421	85214501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_85214632_85217385_85217503_85219235_85219364_85220305
transcript_189862.known	chr8	-	734	3	FSM	ENSG00000176731.12	ENST00000614462.4	734	3	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	272.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGGATATTAAATCACTTA	-85201948	True	NA	NA	False	AATATA	-25	NA	85220367	85214076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_85214632_85217385_85217503_85220305
transcript_189865.known	chr8	+	1721	7	FSM	ENSG00000164879.7	ENST00000285381.3	1721	7	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_3	4.88762609953839	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGAGTGTTGTGTTTTTT	85438708	True	NA	6	True	AATAAA	-16	NA	85438858	85449040	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_85438944_85439711_85439910_85442072_85442192_85444033_85444127_85445155_85445219_85446141_85446298_85448033
transcript_189866.known	chr8	+	1562	7	FSM	ENSG00000104267.10	ENST00000285379.10	1562	7	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	10.1816828995342	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGGTTATTTATTTATT	85463069	True	NA	17	True	AATAAA	-44	NA	85464006	85481493	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_85464116_85465271_85465470_85473692_85473812_85474323_85474417_85475797_85475861_85477119_85477276_85480669
transcript_189868.nic	chr8	+	1008	2	ISM	ENSG00000104267.10	ENST00000518231.1	587	3	-8	7810	0	-7810	5prime_fragment	FALSE	canonical	3	85	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTTTTTTTTTTTTAT	85463065	True	NA	NA	False	AAAAAG	-22	NA	85464002	85466166	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_85464116_85465271
transcript_18987.known	chr1	+	3348	2	FSM	ENSG00000230937.13	ENST00000433108.1	3348	2	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCTCTCTGCCTCTAT	209418101	True	NA	16	True	ACTAAA	-17	NA	209428819	209432545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_209431826_209432203
transcript_189870.known	chr8	+	4877	25	FSM	ENSG00000123124.14	ENST00000517970.6	4877	25	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	21.3062572316731	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACCATAAAAGAGTTAAGT	86342501	True	NA	NA	False	AAAAAG	-9	NA	86342546	86468503	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_86342931_86368938_86369032_86374029_86374121_86380725_86380865_86381504_86381630_86398341_86398480_86398571_86398639_86402018_86402204_86411537_86411875_86425222_86425319_86427642_86427818_86430696_86430752_86431405_86431491_86431614_86431744_86435451_86435528_86435632_86435705_86438584_86438674_86442618_86442779_86448147_86448282_86448372_86448514_86452558_86452680_86457920_86458026_86461223_86461321_86461773_86461847_86466793
transcript_18989.known	chr1	+	2456	13	FSM	ENSG00000008118.10	ENST00000361322.3	2456	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.64991582276861	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCTTCATTTGGTTCTT	209583672	True	NA	6	True	AATAAA	-20	NA	209583713	209613939	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_209583773_209594954_209595076_209599982_209600112_209603213_209603289_209605535_209605675_209606319_209606444_209607857_209607934_209608979_209609093_209609850_209609930_209611464_209611553_209611791_209612217_209612784_209612913_209613039
transcript_189892.known	chr8	-	2970	10	FSM	ENSG00000176623.12	ENST00000406452.8	2970	10	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_1	30.4959013639538	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGACTGTGACCTGTTAT	-86504937	True	NA	-10	True	AATAAA	-19	NA	86508686	86472348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_86474359_86474819_86474954_86477293_86477325_86478922_86479011_86480276_86480333_86484871_86484962_86486483_86486644_86488551_86488640_86506994_86507113_86508491
transcript_189895.nic	chr8	-	1175	10	NIC	ENSG00000176623.12	novel	2970	10	NA	NA	-88	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_1	63.5032807551442	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTTGACTGTGACCTG	-86505025	True	NA	-14	True	AATAAA	-15	NA	86508774	86472352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_86472480_86474819_86474954_86477293_86477325_86478922_86479011_86480276_86480333_86484871_86484962_86486483_86486644_86488551_86488640_86506994_86507113_86508491
transcript_189899.nic	chr8	-	1122	10	NIC	ENSG00000176623.12	novel	2970	10	NA	NA	-88	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_2	70.5911546237283	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTAATATATGAACTATAAC	-86505025	True	NA	-36	True	AATAAA	-26	NA	86508774	86474245	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_86474359_86474819_86474915_86477293_86477325_86478922_86479011_86480276_86480333_86484871_86484962_86486483_86486644_86488551_86488640_86506994_86507113_86508491
transcript_1899.known	chr1	+	1138	5	FSM	ENSG00000225077.3	ENST00000441724.1	1138	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	18.2671152621316	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGACTGTTGCCACTCG	6235973	True	NA	NA	False	NA	NA	NA	6236239	6238940	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_6236337_6236965_6237151_6237244_6237346_6237813_6237849_6238220
transcript_189903.known	chr8	-	1164	9	FSM	ENSG00000176623.12	ENST00000519966.5	1164	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	96.8336201946411	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGGGAGATCAAGCAAAG	-86504932	True	NA	72	True	NA	NA	NA	86508681	86474020	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_86474359_86474819_86474915_86477293_86477325_86478922_86479011_86480276_86480333_86486483_86486644_86488551_86488640_86506994_86507113_86508491
transcript_189904.known	chr8	-	1106	9	FSM	ENSG00000176623.12	ENST00000430676.6	1106	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	77.4216337660218	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTCCATGGCTCAGGCA	-86504926	True	NA	-19	True	AATAAA	-26	NA	86508675	86474111	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_86474359_86474819_86474954_86477293_86477325_86478922_86479011_86480276_86480333_86486483_86486644_86488551_86488640_86506994_86507113_86508491
transcript_189906.nic	chr8	-	1085	9	NIC	ENSG00000176623.12	novel	2970	10	NA	NA	-88	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_5	93.5170439010986	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTTGACTGTGACCTG	-86505025	True	NA	-14	True	AATAAA	-15	NA	86508774	86472352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_86472480_86474819_86474954_86477293_86477325_86478922_86479011_86480276_86480333_86486483_86486644_86488551_86488640_86506994_86507113_86508491
transcript_189917.nic	chr8	-	624	4	ISM	ENSG00000176623.12	ENST00000430676.6	1106	9	-99	12397	-88	52	5prime_fragment	FALSE	canonical	3	247	junction_1	13.6381816969859	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCAAGTTTTGCATCTC	-86505025	True	NA	NA	False	AAAAAG	-16	NA	86508774	86486508	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_86486644_86488551_86488640_86506994_86507113_86508491
transcript_189920.known	chr8	-	950	10	FSM	ENSG00000176623.12	ENST00000523911.5	950	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_9	101.721842950928	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTTGACTGTGACCTG	-86514240	True	NA	-14	True	AATAAA	-15	NA	86514338	86472352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_86472480_86474819_86474915_86477293_86477325_86478922_86479011_86480276_86480333_86484871_86484962_86486483_86486644_86488551_86488640_86506994_86507113_86514241
transcript_189923.known	chr8	+	4857	17	FSM	ENSG00000085719.13	ENST00000517490.6	4857	17	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_2	28.1790452952189	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGACTTCATATTTTACT	86509981	True	NA	15	True	AATAAA	-20	NA	86514434	86561498	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_86514542_86515461_86515500_86528535_86528678_86528944_86529125_86531154_86531230_86532508_86532581_86537562_86537647_86540244_86540335_86544739_86544839_86546594_86546682_86547710_86547771_86548300_86548435_86551045_86551101_86551182_86551235_86554850_86554985_86556101_86556339_86558287
transcript_18993.known	chr1	+	876	2	FSM	ENSG00000123689.6	ENST00000367029.5	876	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATGTAATTCCTGAGAG	209675334	True	NA	10	True	AATAAA	-19	NA	209675411	209676390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_209675550_209675652
transcript_189934.known	chr8	-	11551	10	FSM	ENSG00000156103.16	ENST00000286614.11	11551	10	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_3	5.76280110217331	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTCATAGACATTGTGGT	-88327422	False	NA	-12	True	AATAAA	-17	NA	88327483	88032010	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_88041796_88046668_88046785_88056127_88056279_88074604_88074744_88116506_88116719_88118699_88118862_88167668_88167974_88186475_88186599_88197157_88197307_88327074
transcript_18994.known	chr1	-	4684	2	FSM	ENSG00000162757.4	ENST00000294811.2	4684	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTTGAATTTTGTCCC	-209783908	True	NA	NA	False	ATTAAA	-16	NA	209784559	209779207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_209783710_209784377
transcript_189945.known	chr8	-	1512	8	FSM	ENSG00000156103.16	ENST00000544227.5	1512	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	10.6866309767229	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGTAAAGAGGCCTAAATA	-88327145	False	NA	NA	False	ACTAAA	-3	NA	88327206	88069232	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_88069523_88074604_88074744_88116506_88116719_88118699_88118862_88167668_88167974_88186475_88186599_88197157_88197307_88327074
transcript_189951.known	chr8	-	605	3	FSM	ENSG00000156103.16	ENST00000520568.1	605	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTAAATTGTTCATTAGAC	-88327195	False	3644	NA	False	TTTAAA	-17	NA	88327256	88186324	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_88186599_88197157_88197307_88327074
transcript_189953.known	chr8	+	594	2	FSM	ENSG00000253553.8	ENST00000520849.5	594	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAACGTTCCAGCAAA	88327334	True	NA	NA	False	AGTAAA	-12	NA	88327843	88329467	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_88327899_88328928
transcript_189959.known	chr8	+	2516	11	FSM	ENSG00000104312.8	ENST00000220751.5	2516	11	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	35.3723055510946	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCTGTCCCTTTCTTCC	89756109	True	NA	10	True	AATAAA	-20	NA	89757815	89791064	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_89758234_89762828_89762983_89765340_89765497_89769771_89769930_89771740_89771791_89772666_89772829_89780074_89780161_89784049_89784140_89786592_89786687_89789320_89789483_89790078
transcript_189965.known	chr8	+	1916	10	FSM	ENSG00000104312.8	ENST00000522965.1	1916	10	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	49.3783578323765	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCAATTTTTATGTCTCT	89756099	True	NA	19	True	AGTAAA	-21	NA	89757805	89790608	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_89758234_89765340_89765497_89769771_89769930_89771740_89771791_89772666_89772829_89780074_89780161_89784049_89784140_89786592_89786687_89789320_89789483_89790078
transcript_189972.known	chr8	+	4209	6	FSM	ENSG00000164823.11	ENST00000297438.6	4209	6	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_1	41.2485151247896	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATGCAAGTTCCACTAAA	NA	False	NA	NA	False	AATAAA	-14	NA	89901858	89927868	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_89902126_89909566_89909722_89914076_89914214_89914554_89914747_89921079_89921172_89924502
transcript_189975.known	chr8	+	4230	6	FSM	ENSG00000164823.11	ENST00000451899.7	4230	6	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_5	10.507140429251	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAGTGTTTGGAACACTG	89901682	True	NA	NA	False	AATAAA	-34	NA	89902569	89927888	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_89902838_89909566_89909722_89914076_89914214_89914554_89914747_89921079_89921172_89924502
transcript_189979.known	chr8	+	801	5	FSM	ENSG00000164823.11	ENST00000520659.1	801	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	8.22724133595217	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTAGTTTTCATTTAGA	89901873	False	NA	NA	False	AATAAA	-28	NA	89902760	89921319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_89902838_89909566_89909722_89914076_89914214_89914554_89914747_89921079
transcript_189980.known	chr8	-	4907	19	FSM	ENSG00000104320.14	ENST00000396252.6	4907	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	71.7438000074304	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATACTGTATTTAAGTC	NA	False	NA	-11	True	AATAAA	-14	NA	90003228	89933335	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_89935613_89937025_89937076_89943252_89943367_89946139_89946296_89947823_89947893_89953243_89953692_89955282_89955556_89958724_89958855_89964409_89964508_89970363_89970558_89971172_89971291_89978219_89978324_89980733_89980894_89981374_89981524_89981952_89982003_89982721_89982856_89984524_89984734_89984916_89984974_90003111
transcript_189982.known	chr8	-	4622	16	FSM	ENSG00000104320.14	ENST00000265433.8	4622	16	0	0	0	0	multi-exon	TRUE	canonical	3	111	junction_14	29.9053321146729	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTGTATTTAAGTCAAAAG	-89981999	True	NA	-6	True	AATAAA	-19	NA	89984667	89933330	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_89935613_89937025_89937076_89943252_89943367_89946139_89946296_89947823_89947893_89953243_89953692_89955282_89955556_89958724_89958855_89964409_89964508_89970363_89970558_89971172_89971291_89978219_89978324_89980733_89980894_89981374_89981524_89982721_89982856_89984524
transcript_189985.known	chr8	+	1766	12	FSM	ENSG00000104325.7	ENST00000522161.5	1766	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	174.084856291645	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATTCATTGAATATGTA	89996893	True	NA	NA	False	AATAAA	-13	NA	90001476	90051999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_90001562_90005447_90005846_90006035_90006278_90017123_90017327_90018908_90018967_90019085_90019173_90020908_90021057_90036840_90036941_90042727_90042801_90044848_90044996_90051676_90051740_90051837
transcript_189988.nic	chr8	+	1399	11	NIC	ENSG00000104325.7	novel	1766	12	NA	NA	-75	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	154.792796990041	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATTCATTGAATATGTA	NA	False	NA	NA	False	AATAAA	-13	NA	90001329	90051999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_90001562_90015540_90015667_90017123_90017327_90018908_90018967_90019085_90019173_90020908_90021057_90036840_90036941_90042727_90042801_90044848_90044996_90051676_90051740_90051837
transcript_189990.nic	chr8	-	1772	11	ISM	ENSG00000104320.14	ENST00000265433.8	4622	16	-15	20107	-15	-10079	5prime_fragment	FALSE	canonical	3	111	junction_9	31.7756195848326	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAATGGATGATGTGGCC	-89982014	True	NA	NA	False	AATAAA	-5	NA	89984682	89953437	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_89953692_89955282_89955556_89958724_89958855_89964409_89964508_89970363_89970558_89971172_89971291_89978219_89978324_89980733_89980894_89981374_89981524_89982721_89982856_89984524
transcript_189995.known	chr8	+	2760	10	FSM	ENSG00000104325.7	ENST00000220764.7	2760	10	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_1	33.4490583749803	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTCTCAACCTTTTTT	89996893	True	NA	NA	False	AATAAA	-16	NA	90001476	90053633	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_90001562_90017123_90017327_90018908_90018967_90019085_90019173_90020908_90021057_90036840_90036941_90042727_90042801_90044848_90044996_90051676_90051740_90051837
transcript_189998.nic	chr8	-	1517	10	ISM	ENSG00000104320.14	ENST00000265433.8	4622	16	-15	21953	-15	-11925	5prime_fragment	FALSE	canonical	3	111	junction_8	33.3133273297306	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGTTTTTGATAACTTC	-89982014	True	NA	NA	False	NA	NA	NA	89984682	89955283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_89955556_89958724_89958855_89964409_89964508_89970363_89970558_89971172_89971291_89978219_89978324_89980733_89980894_89981374_89981524_89982721_89982856_89984524
transcript_189999.known	chr8	+	897	9	FSM	ENSG00000104325.7	ENST00000517597.5	897	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	124.022112443709	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAGTCTAATAAATTCTT	89996892	True	NA	NA	False	AATAGA	-34	NA	90001475	90051972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_90001562_90018908_90018967_90019085_90019173_90020908_90021057_90036840_90036941_90042727_90042801_90044848_90044996_90051676_90051740_90051837
transcript_19.known	ERCC-00053	+	1007	1	FSM	ERCC-00053A	DQ516785	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00053_+_0_1000
transcript_19000.known	chr1	-	4478	9	FSM	ENSG00000117595.12	ENST00000367021.8	4478	9	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	9.7178958627884	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAAGACTACTTTCTACT	-209804074	True	NA	-2	True	AATAAA	-26	NA	209806142	209785616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_209788645_209789666_209789786_209790494_209790888_209792268_209792428_209795289_209795419_209796347_209796553_209801239_209801417_209801971_209802044_209805946
transcript_190006.known	chr8	-	2533	11	FSM	ENSG00000104327.7	ENST00000265431.7	2533	11	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_10	41.947586342959	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGTATTTGTTTTTTC	-90082869	False	NA	-1	True	AATAAA	-22	NA	90082879	90058607	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_90060287_90060628_90060701_90063099_90063154_90063280_90063321_90063405_90063462_90065897_90065976_90068997_90069055_90069153_90069238_90078372_90078448_90082025_90082103_90082618
transcript_190007.nnic	chr8	-	2359	11	NNC	ENSG00000104327.7	novel	2533	11	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_10	114.205122477059	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGTATTTGTTTTTTC	-90082885	False	NA	-1	True	AATAAA	-22	NA	90082895	90058607	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_-_90060287_90060628_90060701_90063099_90063154_90063280_90063321_90063405_90063462_90065897_90065976_90068997_90069055_90069153_90069238_90078372_90078448_90082025_90082103_90082808
transcript_190011.known	chr8	-	4992	3	FSM	ENSG00000180694.14	ENST00000458549.7	4992	3	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_2	6.5	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTCTCGCTTTTCTTT	-90645271	True	NA	-6	True	AATAAA	-14	NA	90646083	90621999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_90625863_90631551_90631708_90645110
transcript_190014.known	chr8	-	1174	2	FSM	ENSG00000180694.14	ENST00000422900.1	1174	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATTTACACCTATTCACAA	-90645452	False	NA	NA	False	NA	NA	NA	90645512	90625090	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_90625863_90645110
transcript_190015.known	chr8	+	5049	13	FSM	ENSG00000123119.12	ENST00000417640.7	5049	13	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_1	5.76085931090146	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGTCTACAAATGAAAAA	90791608	True	NA	NA	False	AATAAA	-16	NA	90791774	90959393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_90791986_90801690_90801716_90824716_90824826_90872127_90872154_90881032_90881131_90917491_90917629_90925534_90925657_90928222_90928300_90934303_90934358_90940785_90940899_90949806_90949885_90951112_90951205_90955486
transcript_190018.known	chr8	-	1041	6	FSM	ENSG00000253250.3	ENST00000517562.3	1041	6	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_2	23.5762592452662	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTATTTCTTTTCAGATA	-90983499	True	NA	-5	True	AATAAA	-20	NA	90985238	90958470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_90959031_90960741_90960849_90971065_90971142_90978578_90978653_90980362_90980462_90985113
transcript_190022.nnic	chr8	-	2431	5	Fusion	ENSG00000289502.1_ENSG00000253250.3	novel	1041	6	NA	NA	-30	-8	multi-exon	FALSE	canonical	3	30	junction_3	117.41486277299	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTACACAGTGTCTGT	-90983529	True	NA	-9	True	ATTAAA	-15	NA	90985268	90957036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr8_-_90959031_90960741_90960849_90971065_90971142_90980362_90980462_90985113
transcript_190027.known	chr8	-	841	8	FSM	ENSG00000155099.8	ENST00000518869.1	841	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_7	131.318432111585	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATTTTGCAAGGCGATTT	-91037241	True	NA	NA	False	NA	NA	NA	91040872	90995810	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_90995821_90996653_90996745_91008742_91008796_91018389_91018514_91020156_91020264_91021255_91021405_91024288_91024367_91040643
transcript_190029.known	chr8	-	2759	7	FSM	ENSG00000155099.8	ENST00000285419.8	2759	7	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_6	32.1804806262016	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTTATATACACTTGAATA	-91037228	True	NA	-5	True	AATAAA	-26	NA	91040859	90993801	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_90995821_90996653_90996745_91008742_91008796_91018389_91018514_91020156_91020264_91021255_91021405_91040643
transcript_190035.known	chr8	+	1631	8	FSM	ENSG00000155100.11	ENST00000522894.5	1631	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	91.5797856672374	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCTTGCTTTAATAATT	91063526	True	NA	NA	False	AATATA	-24	NA	91070324	91085417	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_91070467_91071137_91071290_91073830_91073912_91076591_91076732_91078355_91078669_91080668_91080731_91084007_91084115_91084783
transcript_190036.known	chr8	+	3148	7	FSM	ENSG00000155100.11	ENST00000404789.8	3148	7	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_1	12.2701082128706	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTATTTGCTTGAATTGT	91063545	True	NA	NA	False	AATAAA	-21	NA	91070343	91087093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_91070467_91071137_91071290_91073830_91073912_91078355_91078669_91080668_91080731_91084007_91084115_91084783
transcript_190038.nic	chr8	+	399	3	ISM	ENSG00000155100.11	ENST00000524027.5	1330	5	-68	5303	-31	-5303	5prime_fragment	FALSE	canonical	3	203	junction_1	5.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACGGGTATGAAAGTCAT	91063495	True	NA	5	True	NA	NA	NA	91070293	91073904	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_91070467_91071137_91071290_91073830
transcript_190039.known	chr8	-	4892	3	FSM	ENSG00000253738.3	ENST00000522817.3	4935	3	43	0	40	0	multi-exon	FALSE	canonical	3	39	junction_1	111.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCAAATGTGACCACTGT	-91066771	True	NA	NA	False	AATAAA	-41	NA	91070149	91059317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_91063747_91069578_91069823_91069930
transcript_190040.known	chr8	-	2171	2	FSM	ENSG00000253738.3	ENST00000524003.1	2171	2	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTGGACTATGACTTCA	NA	False	NA	NA	False	ATTAAA	-19	NA	91070189	91067910	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_91069823_91069930
transcript_190043.nnic	chr8	+	640	3	NNC	ENSG00000147606.9	novel	5094	18	NA	NA	-12064	-99105	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_2	1	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTATTTTTTCCTGCTG	91197128	True	NA	19	True	AATAAA	-16	NA	91197429	91219254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_91197525_91200612_91200793_91218889
transcript_190047.known	chr8	-	7687	14	FSM	ENSG00000079102.16	ENST00000613302.4	7687	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_11	11.2307692307692	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGGTCAGTCTATTCTC	-92095240	True	NA	0	True	AATAAA	-25	NA	92095654	91954966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_91960518_91970657_91970849_91975904_91975974_91986123_91986326_91986886_91986973_91991638_91991890_92005115_92005298_92011001_92011092_92014578_92014821_92017225_92017364_92075964_92076138_92081233_92081294_92095027_92095172_92095346
transcript_190054.known	chr8	-	7627	13	FSM	ENSG00000079102.16	ENST00000617740.4	7627	13	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_11	9.19352126953179	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGGTCAGTCTATTCTC	-92095240	True	NA	0	True	AATAAA	-25	NA	92095654	91954966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_91960518_91970657_91970849_91975904_91975974_91986123_91986326_91986886_91986973_91991638_91991890_92005115_92005298_92011001_92011092_92014578_92014821_92017225_92017364_92075964_92076138_92095027_92095172_92095346
transcript_190059.known	chr8	-	7454	12	FSM	ENSG00000079102.16	ENST00000436581.6	7454	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_10	10.0658985713938	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGGTCAGTCTATTCTC	-92095240	True	NA	0	True	AATAAA	-25	NA	92095654	91954966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_91960518_91970657_91970849_91975904_91975974_91986123_91986326_91986886_91986973_91991638_91991890_92005115_92005298_92011001_92011092_92014578_92014821_92017225_92017364_92095027_92095172_92095346
transcript_19006.known	chr1	-	4256	7	FSM	ENSG00000117595.12	ENST00000542854.5	4256	7	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_6	39.53655130242	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAATTAGAAGACTACTT	-209804107	True	NA	-8	True	AATAAA	-20	NA	209806175	209785622	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_209788645_209789666_209789786_209790494_209790888_209792268_209792428_209795289_209795419_209796347_209796553_209805946
transcript_190065.nic	chr8	-	2557	12	ISM	ENSG00000079102.16	ENST00000617740.4	7627	13	419	4826	0	0	3prime_fragment	FALSE	canonical	3	8	junction_11	8.12505562600157	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAACCCTCAAGGGCATG	-92094620	True	NA	NA	False	ATTAAA	-45	NA	92095235	91959792	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_91960518_91970657_91970849_91975904_91975974_91986123_91986326_91986886_91986973_91991638_91991890_92005115_92005298_92011001_92011092_92014578_92014821_92017225_92017364_92075964_92076138_92095027
transcript_190066.known	chr8	-	7483	12	FSM	ENSG00000079102.16	ENST00000614812.4	7483	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	9.62434928572076	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGGTCAGTCTATTCTC	-92095240	True	NA	0	True	AATAAA	-25	NA	92095654	91954966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_91960518_91970657_91970849_91975904_91975974_91986123_91986326_91986886_91986973_91991638_91991890_92005115_92005298_92011001_92011092_92014578_92014821_92017225_92017364_92075964_92076138_92095346
transcript_190067.known	chr8	-	7537	12	FSM	ENSG00000079102.16	ENST00000523629.5	7537	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_11	8.74241111285186	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCATGTCCTTGGTCAGT	-92103215	False	NA	-8	True	AATAAA	-17	NA	92103226	91954974	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_91960518_91970657_91970849_91975904_91975974_91986123_91986326_91986886_91986973_91991638_91991890_92005115_92005298_92011001_92011092_92014578_92014821_92017225_92017364_92075964_92076138_92102856
transcript_190070.known	chr8	-	2370	11	FSM	ENSG00000079102.16	ENST00000360348.6	2370	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_10	9.00055553840984	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCAAGGGCATGAGCATT	-92095204	False	NA	NA	False	AAAAAG	-8	NA	92095215	91959786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_91960518_91970657_91970849_91975904_91975974_91986123_91986326_91986886_91986973_91991638_91991890_92005115_92005298_92011001_92011092_92014578_92014821_92017225_92017364_92095027
transcript_190071.known	chr8	-	7372	11	FSM	ENSG00000079102.16	ENST00000615601.4	7372	11	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_10	7.26636084983398	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGGTCAGTCTATTCTC	-92103215	False	NA	0	True	AATAAA	-25	NA	92103226	91954966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_91960518_91970657_91970849_91975904_91975974_91986123_91986326_91986886_91986973_91991638_91991890_92005115_92005298_92011001_92011092_92014578_92014821_92017225_92017364_92102856
transcript_190077.known	chr8	-	2450	10	FSM	ENSG00000079102.16	ENST00000422361.6	2450	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	4.79454422453143	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAACCCTCAAGGGCATG	-92017616	False	NA	NA	False	ATTAAA	-45	NA	92017637	91959792	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_91960518_91970657_91970849_91975904_91975974_91986123_91986326_91986886_91986973_91991638_91991890_92005115_92005298_92011001_92011092_92014578_92014821_92017225
transcript_190079.known	chr8	-	1596	6	FSM	ENSG00000205133.12	ENST00000378861.9	1596	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	47.3387790294596	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGTCTCTTGAGATTT	-92964257	True	NA	NA	False	TATAAA	-5	NA	92966098	92885713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_92886736_92891988_92892075_92916928_92917008_92921502_92921661_92954405_92954565_92966006
transcript_190081.known	chr8	-	3563	5	FSM	ENSG00000205133.12	ENST00000518748.5	3563	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	30.8706980808663	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGATGCCTTTTAGTCCTC	-92964303	True	NA	-4	True	AATAAA	-18	NA	92966144	92883634	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_92886736_92891988_92892075_92916928_92917008_92954405_92954565_92966006
transcript_190082.known	chr8	-	3667	5	FSM	ENSG00000205133.12	ENST00000521988.6	3667	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	20.1912728672563	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTCGGCATTTACCATT	-92964303	True	NA	-2	True	AATAAA	-22	NA	92966144	92883533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_92886736_92891988_92892075_92916928_92917011_92954405_92954565_92966006
transcript_190086.known	chr8	-	1753	4	FSM	ENSG00000205133.12	ENST00000517540.5	1753	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	49.9688792038494	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTGTTTTCCTGCTAGCC	-92964288	True	NA	-16	True	AATAAA	-11	NA	92966129	92885350	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_92886736_92891988_92892075_92954405_92954565_92966006
transcript_190089.known	chr8	+	1943	10	FSM	ENSG00000188343.14	ENST00000518116.5	1943	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	133.882203613641	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTTGTCAATCATGGCT	93697221	True	NA	11	True	AATAAA	-19	NA	93700613	93729250	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_93700674_93701223_93701459_93703619_93703689_93704908_93705011_93708010_93708017_93709770_93709876_93718674_93718789_93724509_93724596_93726393_93726514_93728204
transcript_190090.known	chr8	+	1014	9	NNC	ENSG00000188343.14	novel	4198	9	NA	NA	-1	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	119.268604418766	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAAGTCCAACTGGAAAC	93697200	True	NA	NA	False	ACTAAA	-41	NA	93700592	93728389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_93700674_93701223_93701459_93703619_93703689_93704908_93705006_93709759_93709768_93709770_93709876_93718674_93718789_93726393_93726514_93728204
transcript_190091.known	chr8	+	4198	9	FSM	ENSG00000188343.14	ENST00000518322.6	4198	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	111.400179533069	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTCCATAGCAAGCAGGAT	93697157	True	NA	NA	False	NA	NA	NA	93700549	93731527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_93700674_93701223_93701459_93703619_93703689_93704908_93705011_93708010_93708017_93709770_93709876_93718674_93718789_93726393_93726514_93728204
transcript_190095.known	chr8	+	914	8	FSM	ENSG00000188343.14	ENST00000423990.6	914	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	132.402755998198	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAAGTCCAACTGGAAAC	93697189	True	NA	NA	False	ACTAAA	-41	NA	93700581	93728389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_93700674_93701223_93701459_93703619_93703689_93704908_93705011_93708010_93708017_93709770_93709876_93726393_93726514_93728204
transcript_190096.known	chr8	+	582	7	FSM	ENSG00000188343.14	ENST00000522803.5	582	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	118.678838327086	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTCGTCATCTGGAGGAA	93697178	True	NA	NA	False	NA	NA	NA	93700570	93709813	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_93700674_93701223_93701459_93702519_93702544_93703619_93703689_93704908_93705011_93708010_93708017_93709770
transcript_190098.known	chr8	+	1072	4	FSM	ENSG00000188343.14	ENST00000522324.5	1072	4	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_3	15.6276108929747	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGACTTTCTTAAACTA	93697157	True	NA	NA	False	NA	NA	NA	93700549	93705552	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_93700674_93701223_93701459_93703619_93703689_93704908
transcript_190099.known	chr8	-	8530	4	FSM	ENSG00000183808.12	ENST00000520560.6	8530	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	36.5361312797194	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACATTCTTGGTATATT	-93735664	True	NA	-4	True	AATAAA	-19	NA	93741009	93728154	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_93736439_93737306_93737356_93740628_93740697_93740880
transcript_1901.known	chr1	-	524	5	FSM	ENSG00000116251.11	ENST00000471204.5	524	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3253.49284423679	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGGAAGACGAGGATTAA	-6209193	False	NA	NA	False	NA	NA	NA	6209244	6186691	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6186817_6192929_6193055_6197651_6197757_6208680_6208740_6209134
transcript_19010.known	chr1	+	8481	12	FSM	ENSG00000117597.18	ENST00000491415.7	8481	12	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_4	7.05117070169648	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTTGGAGTACTGATT	209826223	True	NA	5	True	ATTAAA	-19	NA	209827971	209857565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_209828171_209830107_209830148_209830802_209831044_209833184_209833359_209835074_209835164_209836800_209837212_209838908_209839129_209840852_209841056_209842264_209842448_209842582_209842696_209843450_209843697_209851203
transcript_190101.known	chr8	-	8470	3	FSM	ENSG00000183808.12	ENST00000399300.7	8470	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	35	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACATTCTTGGTATATT	-93735672	True	NA	-4	True	AATAAA	-19	NA	93741017	93728154	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_93736439_93737306_93737356_93740880
transcript_190102.known	chr8	-	8423	3	FSM	ENSG00000183808.12	ENST00000519109.6	8423	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	39	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACATTCTTGGTATATT	-93735373	False	NA	-4	True	AATAAA	-19	NA	93740718	93728154	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_93736439_93737306_93737356_93740628
transcript_190106.known	chr8	+	3556	29	FSM	ENSG00000164953.17	ENST00000520680.2	3556	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	20.3715487874634	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTTGAAAGATATTTTC	93754076	True	NA	-11	True	NA	NA	NA	93754909	93816892	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_93755138_93755777_93755867_93758482_93758577_93763841_93763942_93765405_93765476_93765571_93765647_93772588_93772652_93780592_93780748_93780873_93780983_93781657_93781745_93782394_93782461_93785221_93785379_93786222_93786347_93787843_93787950_93791262_93791320_93791881_93792005_93793197_93793297_93795408_93795508_93795900_93795988_93797133_93797234_93797330_93797471_93799617_93799759_93803603_93803685_93804761_93804879_93808839_93808957_93809056_93809162_93809784_93809888_93815304_93815448_93816371
transcript_190108.known	chr8	+	4678	28	FSM	ENSG00000164953.17	ENST00000453321.8	4678	28	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_12	10.6909445932666	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCGACTCCTTTGTTC	93754060	True	NA	83	True	CATAAA	-21	NA	93754893	93818121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_93755138_93755777_93755867_93758482_93758577_93763841_93763942_93765405_93765476_93765571_93765647_93772588_93772652_93780592_93780748_93780873_93780983_93781657_93781745_93782394_93782461_93785221_93785379_93786222_93786347_93787843_93787950_93791262_93791320_93793197_93793297_93795408_93795508_93795900_93795988_93797133_93797234_93797330_93797471_93799617_93799759_93803603_93803685_93804761_93804879_93808839_93808957_93809056_93809162_93809784_93809888_93815304_93815448_93816371
transcript_190116.known	chr8	+	2535	19	FSM	ENSG00000164953.17	ENST00000453906.6	2535	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	19.7384909426065	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTCATGTTTTGTGTGC	93754060	True	NA	-43	True	NA	NA	NA	93754893	93816860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_93755138_93755777_93755867_93758482_93758577_93786222_93786347_93787843_93787950_93791262_93791320_93793197_93793297_93795408_93795508_93795900_93795988_93797133_93797234_93797330_93797471_93799617_93799759_93803603_93803685_93804761_93804879_93808839_93808957_93809056_93809162_93809784_93809888_93815304_93815448_93816371
transcript_190120.known	chr8	+	1319	3	FSM	ENSG00000164953.17	ENST00000475305.1	1319	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	6	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTAAAATATCATTGTT	93754072	True	NA	NA	False	NA	NA	NA	93754905	93759480	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_93755138_93755777_93755867_93758482
transcript_190121.known	chr8	+	2554	3	FSM	ENSG00000164951.16	ENST00000520728.5	2554	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	2	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTTTATTTGTATTAA	93915141	True	NA	NA	False	AAGAAA	-9	NA	93916933	93924388	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_93917080_93917910_93917946_93922015
transcript_190124.known	chr8	+	4210	2	FSM	ENSG00000164951.16	ENST00000297598.5	4210	2	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGTGTTGGTTTTTAA	93915130	True	NA	11	True	ATTAAA	-22	NA	93916922	93926068	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_93917080_93922015
transcript_190128.known	chr8	-	2187	5	FSM	ENSG00000164949.8	ENST00000297596.3	2187	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	3.35410196624968	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATTCTTGATTGATTTTC	-94261547	True	NA	NA	False	AATAAA	-23	NA	94262319	94249252	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_94250588_94252018_94252224_94253035_94253113_94260172_94260513_94262089
transcript_190129.known	chr8	-	2103	5	FSM	ENSG00000164949.8	ENST00000396194.6	2103	5	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_4	4.49305018890286	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATTCTTGATTGATTTTC	-94261578	True	NA	NA	False	AATAAA	-23	NA	94262350	94249252	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_94250588_94252018_94252224_94253035_94253113_94260172_94260513_94262204
transcript_190137.known	chr8	-	3074	15	FSM	ENSG00000197275.14	ENST00000336148.10	3074	15	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_10	21.3875798403787	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGTTAATAATTCCTTG	-94472004	True	NA	-1	True	AATAAA	-21	NA	94475115	94371959	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_94372388_94378179_94378381_94378567_94378635_94380144_94380407_94386983_94387160_94391608_94391900_94393742_94393883_94399413_94399622_94400237_94400464_94404076_94404240_94407438_94407721_94411120_94411316_94458267_94458437_94467404_94467556_94475000
transcript_190149.known	chr8	-	1879	4	FSM	ENSG00000197275.14	ENST00000297592.5	1879	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	66.0454389038335	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTCAATTCTTAAAGCATA	-94471951	True	NA	NA	False	AATAAA	-1	NA	94475062	94431159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_94432657_94458267_94458437_94467404_94467556_94475000
transcript_190150.known	chr8	-	5391	2	FSM	ENSG00000265817.4	ENST00000481490.3	5391	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTTGTGTACTTTTTTT	-94436229	True	NA	-4	True	AATACA	-16	NA	94436944	94427715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_94432657_94436494
transcript_190152.known	chr8	-	6478	24	FSM	ENSG00000164944.12	ENST00000297591.10	6478	24	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_21	25.6801615928111	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTGTATGAGTCTCATTC	-94551835	True	NA	NA	False	AATACA	-21	NA	94553469	94487688	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_94488861_94489938_94490083_94491577_94491910_94492651_94492819_94494859_94494957_94495730_94495892_94496327_94496481_94499373_94499507_94506499_94506718_94509687_94509941_94510416_94510653_94511184_94511730_94511995_94512090_94514868_94514952_94517787_94517943_94518984_94519477_94526222_94527364_94529069_94529343_94530962_94531086_94534838_94535008_94537102_94537152_94538259_94538347_94543826_94543943_94553384
transcript_190156.known	chr8	-	3924	13	FSM	ENSG00000164944.12	ENST00000421249.2	3924	13	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_10	16.7587042060735	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCTTCCTGAACAGTTT	-94551895	True	NA	2	True	ATTAAA	-37	NA	94553529	94510732	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_94511730_94511995_94512090_94514868_94514952_94517787_94517943_94518984_94519477_94526222_94527364_94529069_94529343_94530962_94531086_94534838_94535008_94537102_94537152_94538259_94538347_94543826_94543943_94553384
transcript_190162.known	chr8	-	2183	1	FSM	ENSG00000261437.1	ENST00000562760.1	2183	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGACATTTTGCTGCCAC	-94639136	False	331	-5	True	ATTAAA	-20	NA	94639467	94637284	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_94637300_94639500
transcript_190167.known	chr8	+	3768	16	FSM	ENSG00000104413.18	ENST00000433389.8	3768	16	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_14	99.684702938816	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	94635827	True	NA	20	True	AATAAA	-21	NA	94641173	94707466	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674507_94678202_94678372_94692676_94692828_94696851_94696962_94705924
transcript_190175.known	chr8	+	3746	15	FSM	ENSG00000104413.18	ENST00000423620.6	3746	15	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_12	185.06711413618	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	94641025	False	NA	20	True	AATAAA	-21	NA	94641073	94707466	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674495_94678202_94678372_94692676_94692828_94705924
transcript_190179.nic	chr8	+	2709	15	NIC	ENSG00000104413.18	novel	3768	16	NA	NA	-17	-74	combination_of_known_junctions	FALSE	canonical	3	121	junction_13	129.697233775357	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTGGCCATGATGATAT	94641008	True	NA	23	True	AATAAA	-43	NA	94641056	94706441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674507_94678202_94678372_94696851_94696962_94705924
transcript_190180.nic	chr8	+	3803	15	NIC	ENSG00000104413.18	novel	3768	16	NA	NA	-86	0	combination_of_known_junctions	FALSE	canonical	3	121	junction_13	129.697233775357	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	94640977	False	NA	20	True	AATAAA	-21	NA	94640987	94707466	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674507_94678202_94678372_94696851_94696962_94705924
transcript_190185.known	chr8	+	3465	14	FSM	ENSG00000104413.18	ENST00000454170.7	3465	14	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_12	179.613523297883	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	94635857	True	NA	20	True	AATAAA	-21	NA	94641203	94707466	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674495_94678202_94678372_94705924
transcript_190191.nic	chr8	+	2475	12	ISM	ENSG00000104413.18	ENST00000646773.1	3274	14	-173	32221	-48	6672	5prime_fragment	FALSE	canonical	3	482	junction_10	47.6946208655036	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACATAGATTAATTAGCCA	94640993	False	NA	NA	False	AAAACA	-21	NA	94641025	94675037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307
transcript_190197.nic	chr8	+	1611	10	ISM	ENSG00000104413.18	ENST00000646773.1	3274	14	-143	38893	-18	0	5prime_fragment	FALSE	canonical	3	494	junction_4	39.8723271096108	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGCATGAAAATAGTCT	94641007	True	NA	12	True	AATAAA	-22	NA	94641055	94668365	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948
transcript_190198.nic	chr8	+	3126	10	ISM	ENSG00000104413.18	ENST00000646773.1	3274	14	-127	37362	-2	1531	5prime_fragment	FALSE	canonical	3	494	junction_4	39.8723271096108	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATACCTTTTTGAAAATG	94641023	False	NA	NA	False	NA	NA	NA	94641071	94669896	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948
transcript_190208.known	chr8	+	1813	1	FSM	ENSG00000104413.18	ENST00000523347.1	1813	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	NA	False	NA	20	True	AATAAA	-21	NA	94705653	94707466	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_94705700_94707500
transcript_190209.known	chr8	+	6197	19	FSM	ENSG00000156162.16	ENST00000414645.6	6197	19	0	0	0	0	multi-exon	TRUE	canonical	3	53	junction_7	21.8586932165627	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCTGAGTTTAGCATAAA	94717721	True	NA	10	True	AATAAA	-19	NA	94719899	94793836	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_94720015_94726330_94726442_94734629_94734755_94738368_94738460_94739412_94739535_94739644_94739791_94756035_94756160_94761699_94761835_94765182_94765315_94765710_94765810_94766611_94766686_94768394_94768554_94770451_94770572_94777665_94777787_94780358_94780416_94781083_94781167_94783669_94783803_94787893_94788053_94789745
transcript_19021.known	chr1	+	2966	8	FSM	ENSG00000143469.20	ENST00000472886.5	2966	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	3.45229884959845	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTGTCGCAAGATCTTT	209935965	True	NA	NA	False	TATAAA	-17	NA	209938250	210162326	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_209938278_209952708_209952757_210013632_210013798_210021038_210021255_210094321_210094594_210100011_210100462_210155720_210155911_210160728
transcript_190219.nic	chr8	+	1325	7	NIC	ENSG00000156162.16	novel	1124	6	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_6	36.7786169759912	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCGTGTTCTTAATGGT	94717706	True	NA	NA	False	ATTAAA	-21	NA	94719884	94745084	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_94720015_94726330_94726442_94734629_94734755_94738368_94738460_94739412_94739535_94739644_94739791_94744484
transcript_190225.known	chr8	+	1196	10	FSM	ENSG00000156170.13	ENST00000517976.5	1196	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	81.9145896650896	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCATTGATGTTAATTCT	95023396	True	NA	-2	True	ATTAAA	-9	NA	95025020	95057946	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_95025206_95031994_95032099_95035453_95035577_95036301_95036495_95041569_95041627_95045544_95045648_95046993_95047128_95048456_95048559_95052173_95052231_95057808
transcript_190228.known	chr8	+	946	9	FSM	ENSG00000156170.13	ENST00000454358.6	946	9	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	52.0923158920776	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATTTCATGGCATTGA	95023443	True	NA	-12	True	AAAACA	-6	NA	95025067	95057936	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_95025206_95031994_95032099_95035453_95035577_95041569_95041627_95045544_95045648_95046993_95047128_95048456_95048559_95052173_95052231_95057808
transcript_190231.known	chr8	+	1795	9	FSM	ENSG00000156170.13	ENST00000396124.9	1795	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	68.056502260989	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTACATTCTGCGCTAT	95023364	True	NA	11	True	ATTAAA	-17	NA	95024988	95058710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_95025206_95031994_95032095_95035453_95035577_95041569_95041627_95045544_95045648_95046993_95047128_95048456_95048559_95052173_95052231_95057808
transcript_190235.known	chr8	+	4645	27	FSM	ENSG00000164941.14	ENST00000523731.6	4645	27	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_4	35.528157846981	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATACATGGGAAGAAATCAT	94815467	True	NA	NA	False	NA	NA	NA	94823286	94881746	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_94823562_94824892_94825068_94827262_94827404_94827721_94827794_94828974_94829027_94831991_94832175_94836523_94836632_94838462_94838619_94841490_94841592_94842346_94842489_94849461_94849533_94849915_94850092_94851552_94851687_94853804_94853916_94856776_94856979_94859510_94859633_94865505_94865691_94866157_94866192_94867139_94867197_94867275_94867338_94871883_94872003_94873373_94873478_94874551_94874603_94876073_94876148_94876220_94876286_94876445_94876490_94880117
transcript_190261.known	chr8	-	2674	12	FSM	ENSG00000175305.18	ENST00000308108.9	2674	12	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_11	7.73742648398299	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGCCATTGCTTGGAGA	-94894900	True	NA	NA	False	AATAAA	-32	NA	94895201	94880223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_94881746_94882131_94882290_94882780_94882893_94885066_94885202_94885462_94885559_94887926_94888074_94890414_94890551_94892817_94892970_94893890_94893945_94894022_94894120_94894207_94894248_94895176
transcript_190262.known	chr8	-	3330	12	FSM	ENSG00000175305.18	ENST00000520509.5	3330	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_11	18.5142339702223	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCAGCACTATGGTAGCA	-94896645	True	NA	NA	False	NA	NA	NA	94896678	94879769	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_94881746_94882131_94882290_94882780_94882893_94885066_94885202_94885462_94885559_94887926_94888074_94890414_94890551_94892817_94892970_94893890_94893945_94894022_94894120_94894207_94894248_94896451
transcript_190264.known	chr8	-	5631	5	FSM	ENSG00000164938.14	ENST00000448464.6	5631	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	15.2212844398888	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGTCAGATTCTTTTAT	-94948213	True	NA	-1	True	AATAAA	-17	NA	94949366	94925971	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_94930729_94932069_94932108_94939859_94940221_94940829_94941092_94949153
transcript_190265.known	chr8	-	5605	4	FSM	ENSG00000164938.14	ENST00000342697.5	5605	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	22.7596133534821	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGTCAGATTCTTTTAT	-94948225	True	NA	-1	True	AATAAA	-17	NA	94949378	94925971	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_94930729_94939859_94940221_94940829_94941092_94949153
transcript_190266.known	chr8	+	2901	2	FSM	ENSG00000175895.4	ENST00000315367.4	2901	2	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	0	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTTCTCTGTATATT	95133726	True	NA	15	True	AATAAA	-18	NA	95133784	95156685	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_95134031_95154030
transcript_190273.known	chr8	-	595	5	FSM	ENSG00000156467.10	ENST00000518406.5	595	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2880.65248685085	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGCTGGAGTTTTTGAA	-96196472	True	NA	-48	True	AATAAA	-10	NA	96235539	96230941	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_96231133_96231378_96231516_96231773_96231941_96233155_96233228_96235511
transcript_190274.known	chr8	-	695	4	FSM	ENSG00000156467.10	ENST00000523920.1	695	4	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	2715.50560055888	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCGGGAAAGAAAAGAAAGAG	-96196479	True	NA	NA	False	NA	NA	NA	96235546	96231094	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_96231516_96231773_96231941_96233155_96233228_96235511
transcript_190275.known	chr8	-	8459	4	FSM	ENSG00000156467.10	ENST00000287022.10	8459	4	0	0	0	0	multi-exon	FALSE	canonical	3	4838	junction_3	704.557702076668	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTTCTGTGTCTGGC	-96196478	True	NA	NA	False	AATAAA	-16	NA	96235545	96222946	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_96231133_96231773_96231941_96233155_96233228_96235511
transcript_190276.known	chr8	-	750	3	FSM	ENSG00000156467.10	ENST00000519322.1	750	3	0	0	0	0	multi-exon	FALSE	canonical	3	4838	junction_2	859	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGATTTGACATTTTAAAAA	-96196478	True	NA	NA	False	NA	NA	NA	96235545	96231296	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_96231941_96233155_96233228_96235511
transcript_190278.known	chr8	-	515	4	FSM	ENSG00000156467.10	ENST00000517523.1	515	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	3063.24414088506	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGGAGTTTTTGAATTC	-96194152	False	39067	-45	True	AATAAA	-13	NA	96233219	96230938	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_96231133_96231531_96231622_96231773_96231941_96233155
transcript_190284.known	chr8	-	1463	8	FSM	ENSG00000156469.9	ENST00000287025.4	1463	8	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_6	40.5276423681216	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGGAAACCATTTGATAC	-96258295	True	NA	14	True	AATAAA	-36	NA	96261610	96239401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_96239686_96243918_96244081_96245859_96245932_96246306_96246455_96250905_96251096_96256961_96257115_96258356_96258701_96261500
transcript_190289.known	chr8	+	4990	13	FSM	ENSG00000156471.13	ENST00000517309.6	4990	13	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_5	24.4364254523629	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	96255002	True	NA	NA	False	NA	NA	NA	96261901	96336995	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_96262220_96273298_96273391_96284108_96284154_96287021_96287147_96295097_96295257_96299693_96299846_96304039_96304182_96306443_96306557_96309556_96309623_96320245_96320346_96330212_96330282_96331025_96331096_96333456
transcript_19029.nnic	chr1	+	2491	5	NNC	ENSG00000082497.12	novel	5222	4	NA	NA	-204	950	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	16.4012194668567	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAGGGTGGATCAATATG	NA	False	NA	NA	False	NA	NA	NA	210232591	210243115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_210233012_210237263_210237469_210237943_210238136_210239492_210239609_210241557
transcript_19030.known	chr1	+	5222	4	FSM	ENSG00000082497.12	ENST00000367012.4	5222	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	4.10960933531265	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGCCTCTCTGTTGCTTTC	210232725	False	NA	30	True	AATAAA	-30	NA	210232795	210246255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_210233012_210237943_210238136_210239492_210239609_210241557
transcript_190305.known	chr8	+	2366	11	FSM	ENSG00000156471.13	ENST00000337004.8	2366	11	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_2	90.4933146702009	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGTCTGTAAAATGCTC	96255013	True	NA	25	True	AATAAA	-27	NA	96261912	96334552	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_96262220_96273298_96273391_96295097_96295257_96299693_96299846_96304039_96304182_96306443_96306557_96309556_96309623_96320245_96320346_96330212_96330282_96331025_96331096_96333456
transcript_190309.known	chr8	+	3307	5	FSM	ENSG00000169439.12	ENST00000302190.9	3307	5	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_2	34.0807863759039	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTTCTTCAACTGTA	96488150	True	NA	27	True	AATAAA	-40	NA	96493812	96611790	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_96494332_96593479_96593592_96602394_96602529_96608334_96608471_96609384
transcript_190312.known	chr8	+	677	5	FSM	ENSG00000169439.12	ENST00000522911.5	677	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	178.665189670512	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGAGCCATTCTGGCACT	96493992	False	NA	NA	False	AATAAA	-44	NA	96494007	96609643	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_96494044_96593479_96593592_96602394_96602529_96608334_96608471_96609384
transcript_190316.known	chr8	+	1932	8	FSM	ENSG00000104324.16	ENST00000220763.10	1932	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	2.6954231805876	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATGTGTTCATTTATG	96645133	True	NA	7	True	AATAAA	-19	NA	96645241	97143501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_96645403_96784863_96785331_96834972_96835181_96879797_96880006_96965934_96966047_97029402_97029495_97066008_97066211_97143019
transcript_190317.nnic	chr8	-	3190	2	Genic_Genomic	ENSG00000180543.5	novel	4441	1	NA	NA	-28	-3	multi-exon	FALSE	canonical	1	2	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATTTCTGATTTTCAAA	-97277096	True	NA	-39	True	AATAAA	-15	NA	97277956	97273490	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Genic_Genomic_chr8_-_97274364_97275639
transcript_190319.known	chr8	-	4441	1	FSM	ENSG00000180543.5	ENST00000322128.5	4441	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTCTGATTTTCAAAAAA	-97277068	True	NA	-36	True	AATAAA	-18	NA	97277928	97273487	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_97273500_97277900
transcript_19032.known	chr1	-	726	2	FSM	ENSG00000203706.8	ENST00000437764.5	726	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTGAAGGTGTTTTT	-210234012	False	NA	2	True	AATAAA	-35	NA	210234044	210231455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_210231772_210233634
transcript_190324.known	chr8	+	7662	12	FSM	ENSG00000147649.10	ENST00000336273.8	7662	12	0	0	0	0	multi-exon	TRUE	canonical	3	315	junction_6	25.8680695992838	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTGCTCAAGAAATATAAC	97641428	True	NA	6	True	AATAAA	-23	NA	97644183	97730260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_97644888_97661071_97661174_97686667_97686753_97687428_97687606_97689037_97689104_97690951_97691189_97699753_97699853_97706625_97706751_97713661_97713770_97719048_97719190_97722878_97723036_97724599
transcript_190328.known	chr8	+	2184	11	FSM	ENSG00000147649.10	ENST00000519934.5	2184	11	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_6	102.586792522235	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAGTTCTTAAAATAC	97644278	False	NA	NA	False	ACTAAA	-25	NA	97644545	97725243	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_97644888_97661071_97661174_97686667_97686753_97687428_97687606_97689037_97689104_97690951_97691189_97706625_97706751_97713661_97713770_97719048_97719190_97722878_97723036_97724599
transcript_190330.nic	chr8	+	1903	9	ISM	ENSG00000147649.10	ENST00000336273.8	7662	12	-234	16525	-234	-5352	5prime_fragment	FALSE	canonical	3	315	junction_6	28.3361518205984	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGCAAGGTGAAGATA	NA	False	NA	NA	False	AAAAAG	-15	NA	97643949	97713735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_97644888_97661071_97661174_97686667_97686753_97687428_97687606_97689037_97689104_97690951_97691189_97699753_97699853_97706625_97706751_97713661
transcript_190335.nic	chr8	+	1033	2	ISM	ENSG00000147649.10	ENST00000522313.1	672	5	-843	29998	-234	-29998	5prime_fragment	FALSE	canonical	3	360	junction_1	0	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAGGTAAGTTTGGGAG	NA	False	NA	NA	False	AAGAAA	-3	NA	97643949	97661166	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_97644888_97661071
transcript_190337.known	chr8	+	2442	7	FSM	ENSG00000104341.17	ENST00000521545.7	2442	7	0	0	0	0	multi-exon	TRUE	canonical	3	4039	junction_4	213.878794855612	2140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATACTTGACCAGGTC	97753459	True	NA	NA	False	AAAAAG	-44	NA	97775787	97853013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_97776109_97805352_97805465_97815327_97815402_97816057_97816181_97819139_97819239_97825057_97825154_97851396
transcript_19034.known	chr1	-	413	2	FSM	ENSG00000203706.8	ENST00000480052.1	413	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTGAAGGTGTTTTT	-210234015	False	NA	2	True	AATAAA	-35	NA	210234047	210231455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_210231772_210233950
transcript_190350.known	chr8	+	4133	19	FSM	ENSG00000132561.14	ENST00000254898.7	4133	19	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_16	13.5615879109589	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGACTTTAAAAAGAATGA	97868099	True	NA	NA	False	AATAAA	-20	NA	97869063	98036724	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_97869288_97888074_97888243_97930952_97931523_97941776_97941900_97961407_97961531_97978885_97979009_97994479_97994603_98003660_98003784_98007104_98007228_98007478_98007602_98016539_98016663_98017993_98018117_98021204_98021328_98027415_98027830_98030461_98030615_98032245_98032318_98033041_98033177_98033560_98033660_98035656
transcript_190351.known	chr8	+	3554	19	FSM	ENSG00000132561.14	ENST00000521689.5	3554	19	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_6	11.8359412879939	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGACACAACTTGCTTCTG	NA	False	NA	NA	False	AATATA	-3	NA	97868839	98035978	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_97869288_97888074_97888243_97930952_97931523_97941776_97941900_97961407_97961531_97978885_97979009_97994479_97994603_98003660_98003784_98007104_98007228_98007478_98007602_98016539_98016663_98017993_98018117_98021204_98021328_98027415_98027830_98030461_98030615_98032245_98032318_98033098_98033177_98033560_98033660_98035656
transcript_190355.known	chr8	+	3449	18	FSM	ENSG00000132561.14	ENST00000524308.5	3449	18	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	18.6207831203159	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATGGTATTCAGTGCAAA	97868146	True	NA	3	True	ATTAAA	-15	NA	97869110	98036210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_97869288_97888074_97888243_97930952_97931523_97941776_97941900_97961407_97961531_97978885_97979009_98003660_98003784_98007104_98007228_98007478_98007602_98016539_98016663_98017993_98018117_98021204_98021328_98027415_98027830_98030461_98030615_98032245_98032318_98033041_98033177_98033560_98033660_98035656
transcript_190360.known	chr8	+	2031	8	FSM	ENSG00000132561.14	ENST00000523490.1	2031	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_6	12.162169516453	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	97868148	True	NA	NA	False	NA	NA	NA	97869112	98004286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_97869288_97888074_97888243_97930952_97931523_97941776_97941900_97961407_97961531_97978885_97979009_97994479_97994603_98003660
transcript_190362.known	chr8	-	440	5	FSM	ENSG00000156482.11	ENST00000396070.6	440	5	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_2	2517.76716556555	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTATCTATTTCAGTAT	-97980495	True	NA	-18	True	AATAAA	-19	NA	98045544	98041720	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_98041851_98042644_98042719_98044942_98045089_98045346_98045400_98045507
transcript_190363.known	chr8	-	614	5	FSM	ENSG00000156482.11	ENST00000518850.5	614	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	2638.42750279404	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTATCTATTTCAGTAT	-97980496	True	NA	-18	True	AATAAA	-19	NA	98045545	98041720	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_98041851_98042644_98042776_98044826_98045089_98045346_98045400_98045507
transcript_190364.known	chr8	-	498	5	FSM	ENSG00000156482.11	ENST00000287038.8	498	5	0	0	0	0	multi-exon	FALSE	canonical	3	4116	junction_4	1136.98779676829	1974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTATCTATTTCAGTAT	-97980496	True	NA	-18	True	AATAAA	-19	NA	98045545	98041720	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_98041851_98042644_98042776_98044942_98045089_98045346_98045400_98045507
transcript_190367.known	chr8	-	274	4	FSM	ENSG00000156482.11	ENST00000523172.5	274	4	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_2	2579.92364228091	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTTCACCTACAAAATTT	-97980497	True	NA	-97	True	AGTAAA	-1	NA	98045546	98041799	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_98041851_98042644_98042776_98045346_98045400_98045507
transcript_190368.known	chr8	-	575	4	FSM	ENSG00000156482.11	ENST00000521291.5	575	4	0	0	0	0	multi-exon	FALSE	canonical	3	6222	junction_1	334.068189978566	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTATCTATTTCAGTAT	-97980465	True	NA	-18	True	AATAAA	-19	NA	98045514	98041720	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_98041851_98042644_98042776_98044942_98045089_98045346
transcript_190369.known	chr8	+	1503	3	FSM	ENSG00000177459.11	ENST00000318528.8	1503	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	3	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGAGGGTGACTTTCT	98064357	True	NA	7	True	AATAAA	-19	NA	98064567	98093609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_98064728_98089075_98090030_98093220
transcript_190371.known	chr8	-	884	6	FSM	ENSG00000132541.11	ENST00000522791.5	884	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	248.887926585441	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGTTATATAGATAATA	-98113625	True	NA	-64	True	ATTAAA	-38	NA	98117159	98102396	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_98102905_98104488_98104545_98105937_98106007_98106271_98106327_98108645_98108714_98117031
transcript_190372.known	chr8	-	848	6	FSM	ENSG00000132541.11	ENST00000520507.5	848	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	254.843481376315	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGTGTTTAAATTTGAG	-98113576	True	NA	-106	True	AGTAAA	-2	NA	98117110	98102438	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_98102905_98104488_98104545_98105937_98106007_98106271_98106327_98108645_98108769_98117031
transcript_190373.known	chr8	-	761	5	FSM	ENSG00000132541.11	ENST00000521560.1	761	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	262.328991916639	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCTGCTTTTACTTGAG	-98113637	True	NA	NA	False	TTTAAA	-39	NA	98117171	98102463	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_98102905_98104488_98104545_98105937_98106007_98106271_98106327_98117031
transcript_190376.known	chr8	+	4739	16	FSM	ENSG00000104356.11	ENST00000401707.7	4739	16	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	6.23395718803251	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCAGTTGTGAATATTTA	98115973	True	NA	10	True	AATAAA	-17	NA	98117292	98159835	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_98117391_98123335_98123480_98127594_98127763_98128364_98128541_98129977_98130227_98133948_98134037_98134471_98134660_98136481_98136739_98136860_98136955_98140077_98140190_98140768_98140889_98146567_98146684_98148814_98149007_98150484_98150640_98156049_98156413_98157616
transcript_190382.nic	chr8	+	1243	8	ISM	ENSG00000104356.11	ENST00000401707.7	4739	16	-32	23254	-32	6541	5prime_fragment	FALSE	canonical	3	57	junction_3	6.68534797531291	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAACTGAATTGCCTGAC	98115941	True	NA	NA	False	AAGAAA	-4	NA	98117260	98136581	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_98117391_98123335_98123480_98127594_98127763_98128364_98128541_98129977_98130227_98133948_98134037_98134471_98134660_98136481
transcript_190384.nic	chr8	+	681	5	ISM	ENSG00000104356.11	ENST00000401707.7	4739	16	-32	29795	-32	0	5prime_fragment	FALSE	canonical	3	57	junction_3	7.92148975887743	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCACATGAACCGGACGCT	98115941	True	NA	NA	False	AATAAA	-19	NA	98117260	98130040	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_98117391_98123335_98123480_98127594_98127763_98128364_98128541_98129977
transcript_190385.known	chr8	+	585	5	FSM	ENSG00000104356.11	ENST00000522319.5	585	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	27.3267268438794	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCACATGAACCGGACGCT	98115977	True	NA	NA	False	AATAAA	-19	NA	98117296	98130040	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_98117331_98123335_98123480_98127594_98127763_98128364_98128541_98129977
transcript_190387.known	chr8	-	4402	11	FSM	ENSG00000104361.10	ENST00000430223.7	4402	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	3.71618083521241	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGAATGTATTCTTCCCC	-98294212	False	NA	1	True	AATAAA	-20	NA	98294235	98189825	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_98193091_98194727_98194823_98195941_98196006_98203107_98203197_98205110_98205247_98212404_98212502_98222478_98222601_98236154_98236215_98252462_98252635_98254018_98254088_98294002
transcript_190390.known	chr8	-	2833	11	FSM	ENSG00000104375.17	ENST00000419617.7	2833	11	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	19.1373979422491	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCGTTTCTGTATCTTT	-98823778	True	NA	-2	True	AATAAA	-21	NA	98825688	98454632	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_98456001_98526741_98526918_98547968_98548162_98579663_98579790_98596031_98596170_98706466_98706635_98707146_98707312_98749275_98749391_98767242_98767372_98774738_98774820_98825514
transcript_190393.known	chr8	-	2485	9	FSM	ENSG00000104375.17	ENST00000617590.1	2485	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	45.4745808117018	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGTTTCTGTATCTTTGT	-98823761	True	NA	0	True	AATAAA	-23	NA	98825671	98454630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_98456001_98526741_98526918_98547968_98548162_98579663_98579790_98596031_98596170_98749275_98749391_98767242_98767372_98774738_98774820_98825514
transcript_190394.nic	chr8	-	1346	9	ISM	ENSG00000104375.17	ENST00000419617.7	2833	11	-54	93333	-54	0	5prime_fragment	FALSE	canonical	3	113	junction_2	14.6282047770736	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGCTTTTTTACATTAAA	-98823832	False	NA	NA	False	GATAAA	-42	NA	98825742	98547965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_98548162_98579663_98579790_98596031_98596170_98706466_98706635_98707146_98707312_98749275_98749391_98767242_98767372_98774738_98774820_98825514
transcript_190403.nic	chr8	+	4636	29	ISM	ENSG00000132549.20	ENST00000357162.7	14011	62	-24	366192	-16	48	5prime_fragment	FALSE	canonical	2	7	junction_23	5.12646196171375	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTGGTCAGCCCATGAG	99013190	False	NA	NA	False	AAAAAG	-12	NA	99013249	99511388	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_99013348_99013759_99013936_99038422_99038567_99096311_99096433_99102952_99103121_99111097_99111280_99115699_99115875_99121176_99121446_99134631_99134728_99135014_99135138_99135595_99135734_99136664_99136753_99142973_99143166_99147840_99148011_99156548_99156744_99170038_99170164_99192875_99193058_99274197_99274333_99275080_99275255_99384207_99384318_99391556_99391705_99431536_99431665_99442400_99442636_99467413_99467635_99481598_99481803_99501686_99501859_99502835_99502951_99507136_99507204_99511103
transcript_190414.known	chr8	-	380	2	FSM	ENSG00000253948.3	ENST00000521696.1	380	2	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTGTTTTAATTTCTAA	-99013033	False	NA	-5	True	AATAAA	-19	NA	99013044	98996762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_98996967_99012868
transcript_190415.known	chr8	-	694	4	FSM	ENSG00000164919.11	ENST00000522940.5	694	4	0	0	0	0	multi-exon	FALSE	canonical	3	359	junction_3	2077.52967621537	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTGGACAGTAAGTCTT	-99858344	True	NA	-16	True	AATAAA	-12	NA	99893623	99878150	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_99878266_99887489_99887619_99891907_99892053_99893318
transcript_190416.known	chr8	-	571	4	FSM	ENSG00000164919.11	ENST00000520271.5	571	4	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_3	2027.37800016562	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGACAGTAAGTCTTTC	-99858343	True	NA	-14	True	AATAAA	-14	NA	99893622	99878148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_99878266_99887489_99887619_99891907_99892053_99893442
transcript_190417.known	chr8	-	429	4	FSM	ENSG00000164919.11	ENST00000517682.6	429	4	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_3	2114.56635953779	1024	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGACAGTAAGTCTTTC	-99858402	True	NA	-14	True	AATAAA	-14	NA	99893681	99878148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_99878266_99887489_99887619_99891907_99892048_99893638
transcript_190418.known	chr8	-	724	4	FSM	ENSG00000164919.11	ENST00000518171.5	724	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	2096.09006379868	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCATTTGTATGTTATCT	-99858418	True	NA	NA	False	NA	NA	NA	99893697	99885991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_99886383_99887489_99887619_99891907_99892053_99893638
transcript_190426.known	chr8	+	947	4	FSM	ENSG00000147669.11	ENST00000353107.8	947	4	0	0	0	0	multi-exon	FALSE	canonical	3	2053	junction_3	222.549370302911	236	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGTGTCACTGTGTCA	100134703	True	NA	15	True	AATAAA	-16	NA	100150635	100154003	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_100150710_100151346_100151417_100151823_100151917_100153293
transcript_190428.known	chr8	-	4186	10	FSM	ENSG00000034677.13	ENST00000341084.7	4186	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_9	12.4225998749988	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCCTTCTGGTGTGTA	-100309425	True	NA	-11	True	AATAAA	-17	NA	100309953	100257066	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_100259247_100259853_100259998_100261541_100261756_100264033_100264196_100264670_100264786_100268784_100268948_100269868_100270014_100274952_100275162_100287500_100288268_100309866
transcript_190429.known	chr8	-	2779	6	FSM	ENSG00000186106.11	ENST00000519597.5	2779	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	52.1167919196875	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGATTTCTCTTTTTTTT	-100557604	True	NA	-5	True	AATAAA	-21	NA	100559784	100520771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_100522772_100527844_100528004_100529522_100529861_100532355_100532461_100533208_100533312_100559710
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transcript_190602.known	chr8	-	1399	5	FSM	ENSG00000164924.18	ENST00000521309.5	1399	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	1930.72050993923	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAAATAACTTGAGATGAT	-100902511	True	NA	54	True	NA	NA	NA	100952019	100919828	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100951928
transcript_190605.known	chr8	-	883	4	FSM	ENSG00000164924.18	ENST00000518736.5	883	4	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_3	1930.1140438384	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATGCAATTACTGAGAGA	-100951585	False	NA	NA	False	NA	NA	NA	100951595	100923984	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_100924299_100924915_100925040_100948595_100948901_100951455
transcript_190606.known	chr8	-	3007	6	FSM	ENSG00000164924.18	ENST00000457309.2	3007	6	0	0	0	0	multi-exon	FALSE	canonical	3	629	junction_5	1522.61677384692	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTTGGGGTCTTTATTT	-100952983	False	7530	-36	True	AATAAA	-11	NA	100952993	100918578	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100948595_100948901_100952849
transcript_190607.known	chr8	-	2247	5	FSM	ENSG00000164924.18	ENST00000480304.5	2247	5	0	0	0	0	multi-exon	FALSE	canonical	3	3521	junction_4	417.158468090964	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGCCTGGGCAAAAGAGC	-100902461	True	NA	NA	False	NA	NA	NA	100951969	100922437	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_100924051_100924134_100924299_100924915_100925040_100948595_100948901_100951928
transcript_190608.known	chr8	-	732	6	FSM	ENSG00000120963.12	ENST00000521272.5	732	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	773.337028726803	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATCAGCAAAAATAAAGGG	-101191749	True	NA	NA	False	NA	NA	NA	101205682	101199159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_101199240_101199989_101200098_101201606_101201744_101202332_101202448_101204649_101204694_101205434
transcript_190609.known	chr8	-	959	5	FSM	ENSG00000120963.12	ENST00000519882.5	959	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	776.360418877727	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATCACAGGATAAATGGTT	-101205719	False	NA	NA	False	AATAAA	-19	NA	101205732	101198938	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_101199240_101199989_101200098_101201606_101201744_101202332_101202448_101205434
transcript_190613.known	chr8	-	2672	4	FSM	ENSG00000120963.12	ENST00000311212.9	2672	4	0	0	0	0	multi-exon	TRUE	canonical	3	1612	junction_2	39.5979797464467	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAACTAGTCTAATTTCTT	-101191740	True	NA	NA	False	ATTAAA	-18	NA	101205673	101197051	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_101199240_101199989_101200098_101201606_101201744_101205434
transcript_190618.known	chr8	+	5232	16	FSM	ENSG00000083307.12	ENST00000646743.1	5232	16	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_8	5.60793089195016	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACAGTGTCTGGTGCTTTC	101489509	True	NA	27	True	AATAAA	-23	NA	101492438	101669726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_101492790_101543240_101543437_101552714_101552783_101558418_101558813_101570338_101570395_101573667_101573825_101577407_101577520_101599056_101599152_101619538_101619698_101631636_101631725_101632225_101632366_101636896_101636929_101644130_101644226_101649413_101649500_101664453_101664519_101666588
transcript_190628.known	chr8	+	1178	2	FSM	ENSG00000083307.12	ENST00000472106.2	1178	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCACAACACATGGGAATTA	101489512	True	NA	NA	False	NA	NA	NA	101492441	101544070	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_101492790_101543240
transcript_190629.known	chr8	-	3655	7	FSM	ENSG00000104490.18	ENST00000311028.4	3655	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	3.86221007541882	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCATGAGATTTTCATG	-102124207	True	NA	0	True	ATTAAA	-22	NA	102124334	101686542	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_101689407_101692790_101692897_101719251_101719649_101887140_101887228_101915808_101915859_102020236_102020290_102124236
transcript_190633.known	chr8	-	583	3	FSM	ENSG00000104490.18	ENST00000522448.5	583	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAAATGGTAACATATTCC	-101790956	True	NA	NA	False	ATTAAA	-1	NA	101790969	101688642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_101688721_101719251_101719649_101790861
transcript_190634.known	chr8	-	1613	9	FSM	ENSG00000048392.13	ENST00000522368.5	1613	9	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_8	187.933332594301	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATTAGGATGCAAAAATAAA	-102238747	False	NA	NA	False	TTTAAA	-44	NA	102238775	102207744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_102208286_102212775_102212890_102214053_102214159_102218813_102218948_102224045_102224141_102224884_102225019_102225917_102226035_102232148_102232305_102238558
transcript_190635.known	chr8	-	900	8	FSM	ENSG00000048392.13	ENST00000395912.6	900	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	199.365319482213	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCTCTCGTTTTAAAAC	-102238846	False	NA	-43	True	NA	NA	NA	102238874	102208132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_102208286_102212775_102212890_102214053_102214159_102218813_102218948_102224045_102224141_102224884_102225019_102225917_102226035_102238826
transcript_190638.known	chr8	-	4774	9	FSM	ENSG00000048392.13	ENST00000251810.8	4774	9	0	0	0	0	multi-exon	FALSE	canonical	3	574	junction_1	34.6112337254828	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGTGTCTGCAGATAAA	-102235118	True	NA	-4	True	AATAAA	-18	NA	102238961	102204501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_102208286_102212775_102212890_102214053_102214159_102218813_102218948_102224045_102224141_102224884_102225019_102225917_102226035_102232148_102232305_102238826
transcript_190643.nic	chr8	-	4921	33	ISM	ENSG00000104517.13	ENST00000220959.8	9418	59	-117	40219	-47	4905	5prime_fragment	TRUE	canonical	3	93	junction_25	34.704106385268	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGCATCCTTTTTGATT	-102398559	True	NA	NA	False	AAAAAG	-6	NA	102412806	102293954	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_102294116_102294981_102295112_102295203_102295331_102295413_102295533_102295635_102295783_102296892_102296985_102297457_102297607_102298391_102298490_102298847_102298972_102299451_102299548_102299999_102300152_102304042_102304170_102305084_102305296_102311298_102311497_102311734_102311890_102312133_102312246_102312341_102312486_102313803_102313917_102314743_102314854_102323310_102323496_102326545_102326664_102327741_102327897_102329089_102329201_102329282_102329400_102342472_102342685_102345395_102345546_102346235_102346396_102346902_102347093_102360070_102360191_102360588_102360666_102361124_102361207_102361581_102361627_102412172
transcript_190645.nic	chr8	-	3456	21	ISM	ENSG00000104517.13	ENST00000521922.5	9008	59	-137	50902	-137	-6233	5prime_fragment	FALSE	canonical	3	69	junction_13	27.9879884950669	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAGAAGAAGAGGGTGAG	NA	False	NA	NA	False	AATAAA	-5	NA	102412896	102305099	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_102305296_102311298_102311497_102311734_102311890_102312133_102312246_102312341_102312486_102313803_102313917_102314743_102314854_102323310_102323496_102326545_102326664_102327741_102327897_102329089_102329201_102329282_102329400_102342472_102342667_102345395_102345546_102346235_102346396_102346902_102347093_102360070_102360191_102360588_102360666_102361124_102361207_102361581_102361627_102412172
transcript_190646.nic	chr8	-	3324	21	ISM	ENSG00000104517.13	ENST00000220959.8	9418	59	-57	51364	13	-6233	5prime_fragment	FALSE	canonical	3	93	junction_13	23.3479656501375	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAGAAGAAGAGGGTGAG	-102398499	True	NA	NA	False	AATAAA	-5	NA	102412746	102305099	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_102305296_102311298_102311497_102311734_102311890_102312133_102312246_102312341_102312486_102313803_102313917_102314743_102314854_102323310_102323496_102326545_102326664_102327741_102327897_102329089_102329201_102329282_102329400_102342472_102342685_102345395_102345546_102346235_102346396_102346902_102347093_102360070_102360191_102360588_102360666_102361124_102361207_102361581_102361627_102412172
transcript_190649.nic	chr8	-	3089	20	ISM	ENSG00000104517.13	ENST00000521922.5	9008	59	7	57128	7	-12459	5prime_fragment	FALSE	canonical	3	69	junction_12	28.4560213725421	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTGTTATCATCATGGC	-102398505	True	NA	NA	False	AATAAA	-32	NA	102412752	102311325	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_102311497_102311734_102311890_102312133_102312246_102312341_102312486_102313803_102313917_102314743_102314854_102323310_102323496_102326545_102326664_102327741_102327897_102329089_102329201_102329282_102329400_102342472_102342667_102345395_102345546_102346235_102346396_102346902_102347093_102360070_102360191_102360588_102360666_102361124_102361207_102361581_102361627_102412172
transcript_190650.nic	chr8	-	3083	20	ISM	ENSG00000104517.13	ENST00000220959.8	9418	59	-39	57590	-28	-12459	5prime_fragment	FALSE	canonical	3	93	junction_12	23.6876020963455	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTGTTATCATCATGGC	-102398481	True	NA	NA	False	AATAAA	-32	NA	102412728	102311325	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_102311497_102311734_102311890_102312133_102312246_102312341_102312486_102313803_102313917_102314743_102314854_102323310_102323496_102326545_102326664_102327741_102327897_102329089_102329201_102329282_102329400_102342472_102342685_102345395_102345546_102346235_102346396_102346902_102347093_102360070_102360191_102360588_102360666_102361124_102361207_102361581_102361627_102412172
transcript_190658.nic	chr8	-	2188	13	ISM	ENSG00000104517.13	ENST00000521922.5	9008	59	-137	72403	-137	19295	5prime_fragment	FALSE	canonical	3	69	junction_5	32.2579662856927	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAAATCCAGTGCTGGTA	NA	False	NA	NA	False	AATAAA	-3	NA	102412896	102326600	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_102326664_102327741_102327897_102329089_102329201_102329282_102329400_102342472_102342667_102345395_102345546_102346235_102346396_102346902_102347093_102360070_102360191_102360588_102360666_102361124_102361207_102361581_102361627_102412172
transcript_190659.nic	chr8	-	2206	13	ISM	ENSG00000104517.13	ENST00000220959.8	9418	59	-207	72865	-137	19295	5prime_fragment	FALSE	canonical	3	93	junction_5	25.966190624648	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAAATCCAGTGCTGGTA	NA	False	NA	NA	False	AATAAA	-3	NA	102412896	102326600	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_102326664_102327741_102327897_102329089_102329201_102329282_102329400_102342472_102342685_102345395_102345546_102346235_102346396_102346902_102347093_102360070_102360191_102360588_102360666_102361124_102361207_102361581_102361627_102412172
transcript_190671.nic	chr8	-	2257	5	ISM	ENSG00000104517.13	ENST00000521922.5	9008	59	-36	104563	-36	891	5prime_fragment	FALSE	canonical	3	165	junction_1	9.13783344124853	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTGTGGGGGGGATACCA	-102398548	True	NA	NA	False	AAAAAG	-10	NA	102412795	102358760	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_102360191_102360588_102360666_102361124_102361207_102361581_102361627_102412172
transcript_190674.known	chr8	+	2376	3	FSM	ENSG00000246263.4	ENST00000520820.3	2384	3	8	0	8	0	multi-exon	FALSE	canonical	1	5	junction_2	16	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCGCAATAAAAGTGGTTTT	102238877	True	NA	NA	False	NA	NA	NA	102239393	102253750	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_102239701_102244004_102244122_102251798
transcript_190675.known	chr8	-	3659	4	FSM	ENSG00000155090.15	ENST00000395884.3	3659	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	80.2662236975595	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGGAATGGTCATTGCA	-102650617	False	NA	-7	True	AATAAA	-14	NA	102654375	102648785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_102650392_102651148_102652062_102652163_102652398_102653469
transcript_190676.known	chr8	-	2915	4	FSM	ENSG00000155090.15	ENST00000285407.11	2915	4	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_3	15.5777619273972	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAATGGTCATTGCATT	-102651967	True	NA	-5	True	AATAAA	-16	NA	102655725	102648783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_102650392_102651148_102652062_102652163_102652398_102655565
transcript_190683.known	chr8	+	2130	5	FSM	ENSG00000283959.2	ENST00000640504.1	2130	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	2.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTTATGTAAAATTGCAT	102656430	False	NA	NA	False	NA	NA	NA	102656463	102687118	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_102656787_102666202_102666340_102670139_102670271_102683579_102683755_102685754
transcript_190688.known	chr8	+	756	4	FSM	ENSG00000253320.7	ENST00000517996.5	756	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	12.328828005938	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTTAAAAGTATATGAAATC	102929944	True	NA	NA	False	NA	NA	NA	102930181	102977738	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_102930519_102937623_102937758_102941920_102942054_102977586
transcript_190691.known	chr8	+	504	2	FSM	ENSG00000253320.7	ENST00000524007.1	504	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGCGACCTTCCTGTG	102863881	True	NA	NA	False	AATAAA	-18	NA	102864336	102865319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_102864624_102865102
transcript_190698.known	chr8	-	3937	13	FSM	ENSG00000155096.15	ENST00000684721.1	3937	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	613.303141240574	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGTAATCTCAGTTCAAAA	-102864159	False	NA	-20	True	AAAAAG	-33	NA	102864192	102826480	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_102828590_102829455_102829487_102829820_102829937_102833055_102833219_102834188_102834264_102834665_102834748_102836255_102836391_102838743_102838917_102839649_102839824_102843550_102843748_102849986_102850145_102858012_102858151_102863806
transcript_190701.known	chr8	-	2857	13	FSM	ENSG00000155096.15	ENST00000347770.8	2857	13	0	0	0	0	multi-exon	FALSE	canonical	1	457	junction_10	442.215280340545	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAAGTTCAGATTCATTA	-102864160	False	NA	-4	True	AGTAAA	-17	NA	102864193	102827822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_102828679_102829271_102829487_102829820_102829937_102833055_102833219_102834188_102834264_102834665_102834748_102836255_102836391_102838743_102838917_102839649_102839824_102843550_102843748_102849998_102850145_102858012_102858151_102863806
transcript_190724.known	chr8	-	3802	12	FSM	ENSG00000155096.15	ENST00000682969.1	3802	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	607.739980828578	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGATTTCTATATAGTAA	-102864159	False	NA	21	True	TATAAA	-4	NA	102864192	102826439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_102828590_102829455_102829487_102829820_102829937_102833055_102833219_102834188_102834264_102834665_102834748_102836255_102836391_102838743_102838917_102839649_102839824_102843550_102843730_102858012_102858151_102863806
transcript_190725.known	chr8	-	4196	12	FSM	ENSG00000155096.15	ENST00000337198.10	4196	12	0	0	0	0	multi-exon	FALSE	canonical	1	642	junction_2	295.241797529185	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTATGTGTATTAACAAT	-102832217	True	NA	-11	True	AATAGA	-20	NA	102864163	102826307	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_102828679_102829271_102829487_102829820_102829937_102833055_102833219_102834188_102834264_102834665_102834748_102836255_102836391_102838743_102838917_102839649_102839824_102843550_102843748_102858012_102858151_102863806
transcript_190747.known	chr8	-	4153	11	FSM	ENSG00000155096.15	ENST00000684459.1	4153	11	0	0	0	0	multi-exon	FALSE	canonical	1	25	junction_3	605.67946143154	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTCCTCATGTTTTACT	-102864159	False	NA	-18	True	GATAAA	-5	NA	102864192	102826367	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_102828679_102829271_102829487_102829820_102829937_102834188_102834264_102834665_102834748_102836255_102836542_102838743_102838917_102839649_102839824_102843550_102843748_102858012_102858151_102863806
transcript_19075.known	chr1	+	778	7	FSM	ENSG00000153363.14	ENST00000653498.1	778	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	51.1490197581754	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTTGAAGGCCCAC	211382396	True	NA	10	True	AATAAA	-17	NA	211382829	211432537	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_211382926_211384441_211384535_211391615_211391698_211391826_211391977_211396766_211396832_211426210_211426284_211432318
transcript_19076.known	chr1	+	3508	6	FSM	ENSG00000153363.14	ENST00000423222.6	3536	6	28	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	46.3577393754268	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTGTTTCTTTTTTCCA	211382369	True	NA	NA	False	AATAAA	-19	NA	211382802	211435333	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_211382926_211391615_211391698_211391826_211391977_211396766_211396832_211426210_211426284_211432318
transcript_190767.known	chr8	-	4229	13	FSM	ENSG00000155096.15	ENST00000682014.1	4229	13	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	671.224559832417	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATAAATGTTTTTATTCCT	-102864159	False	NA	23	True	AGTAAA	-41	NA	102864192	102826378	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_102828679_102829271_102829487_102829820_102829934_102830125_102830222_102833055_102833219_102834188_102834264_102834665_102834748_102836255_102836391_102838743_102838917_102839649_102839824_102843550_102843730_102858012_102858151_102863806
transcript_190769.known	chr8	+	5635	13	FSM	ENSG00000155097.12	ENST00000518738.2	5635	13	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_3	27.2930343168769	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCAGAGAGATGTGGTTT	103014918	True	NA	14	True	AATAAA	-16	NA	103021082	103073051	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_103021226_103040797_103040969_103042339_103042408_103048869_103048956_103051049_103051145_103052730_103052823_103053883_103053983_103055867_103055937_103062954_103063048_103063134_103063229_103064713_103064812_103066320_103066448_103068651
transcript_19077.known	chr1	+	1671	5	FSM	ENSG00000153363.14	ENST00000664255.1	1671	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	13.0072095393286	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTACTCTGTCCCTT	NA	False	NA	NA	False	TTTAAA	-6	NA	211382735	211399219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_211382926_211391615_211391698_211391826_211391977_211396766_211396832_211398035
transcript_190773.known	chr8	+	5612	13	FSM	ENSG00000155097.12	ENST00000395862.7	5612	13	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_1	96.6181990563315	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCAGAGAGATGTGGTTT	103014898	True	NA	14	True	AATAAA	-16	NA	103021062	103073051	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_103021183_103040797_103040969_103042339_103042408_103048869_103048956_103051049_103051145_103052730_103052823_103053883_103053983_103055867_103055937_103062954_103063048_103063134_103063229_103064713_103064812_103066320_103066448_103068651
transcript_190779.known	chr8	+	2817	3	FSM	ENSG00000164929.17	ENST00000309982.10	2817	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	3.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGGCAGTTACAGAGAAT	103140535	True	NA	NA	False	AATAAA	-20	NA	103140724	103230305	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_103141058_103212918_103213086_103227988
transcript_190782.known	chr8	+	2774	8	FSM	ENSG00000164930.12	ENST00000523739.5	2774	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	22.7138364735449	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGCTTTTACACTGAATT	103297430	True	NA	NA	False	NA	NA	NA	103298864	103331994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_103298996_103299955_103300085_103300199_103300285_103318589_103318787_103324480_103325499_103328267_103328417_103329654_103330066_103331340
transcript_190784.known	chr8	+	3728	7	FSM	ENSG00000164930.12	ENST00000358755.5	3728	7	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_4	11.3834675443528	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGAGTATTCTGTGGTT	103297463	True	NA	16	True	AATAAA	-19	NA	103298897	103332866	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_103298996_103299955_103300285_103318589_103318787_103324480_103325499_103328267_103328417_103329654_103330066_103331340
transcript_190787.known	chr8	+	3646	6	FSM	ENSG00000164930.12	ENST00000522484.5	3646	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	25.1507455157894	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGAGTATTCTGTGGTT	103298819	False	NA	16	True	AATAAA	-19	NA	103298830	103332866	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_103298996_103299955_103300285_103318589_103318787_103324480_103325499_103329654_103330066_103331340
transcript_190789.known	chr8	+	1240	4	FSM	ENSG00000164932.13	ENST00000330295.10	1240	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	2.05480466765633	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTTAATATCTTTAAATTAA	103371144	True	NA	NA	False	AATAAA	-16	NA	103371537	103382989	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_103371807_103375737_103375960_103378026_103378244_103382457
transcript_190792.known	chr8	+	1970	11	FSM	ENSG00000164934.14	ENST00000612750.5	1970	11	0	0	0	0	multi-exon	FALSE	canonical	2	1353	junction_2	226.809699968939	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGCCTATTTTTGGTAA	103405890	True	NA	12	True	ATTAAA	-21	NA	103415385	103443453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_103415517_103420263_103420464_103420974_103421083_103426055_103426146_103427096_103427253_103430611_103430690_103432658_103432742_103435625_103435791_103440135_103440272_103441454_103441619_103442794
transcript_190795.known	chr8	+	5300	10	FSM	ENSG00000164934.14	ENST00000518554.2	5300	10	0	0	0	0	multi-exon	FALSE	canonical	2	1353	junction_2	239.064276702024	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTTGGCCTATTTTTGG	103405916	True	NA	9	True	ATTAAA	-18	NA	103415411	103443450	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_103415517_103420263_103420464_103420974_103421083_103426055_103426146_103427096_103430690_103432658_103432742_103435625_103435791_103440135_103440272_103441454_103441619_103442794
transcript_190804.known	chr8	-	2891	7	FSM	ENSG00000164933.12	ENST00000297578.9	2891	7	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_5	23.5065002830186	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCTTGTGTGATAGATAA	-103412004	True	NA	-1	True	AATAAA	-28	NA	103415107	103398637	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_103400547_103401515_103401662_103401940_103402055_103403163_103403325_103404775_103404862_103407633_103407785_103414783
transcript_19081.known	chr1	+	469	3	FSM	ENSG00000153363.14	ENST00000610948.1	469	3	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	18	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTGTTTTTGAAGGCC	211398078	False	NA	7	True	AATAAA	-14	NA	211399257	211432534	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_211399438_211426210_211426284_211432318
transcript_190814.known	chr8	-	1347	6	FSM	ENSG00000164933.12	ENST00000523866.1	1347	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_4	53.0056600751278	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATTGCTTTAAAATTAACC	-103411966	True	NA	NA	False	NA	NA	NA	103415069	103400057	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_103400547_103401515_103401662_103401940_103402055_103403163_103403325_103407633_103407785_103414783
transcript_190817.known	chr8	+	837	5	FSM	ENSG00000164934.14	ENST00000519682.5	837	5	0	0	0	0	multi-exon	FALSE	canonical	2	1353	junction_2	312.161316469546	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGTTTAGTCCCAGATAC	103405916	True	NA	NA	False	NA	NA	NA	103415411	103427430	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_103415517_103420263_103420464_103420974_103421083_103426055_103426146_103427096
transcript_19082.known	chr1	+	681	6	FSM	ENSG00000153363.14	ENST00000657539.1	681	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	15.4790180567115	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTTTTTGAAGGCCC	211382396	True	NA	8	True	AATAAA	-15	NA	211382829	211432535	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_211382926_211391615_211391698_211391826_211391977_211396766_211396832_211426210_211426284_211432320
transcript_190826.known	chr8	+	1062	6	FSM	ENSG00000176406.23	ENST00000523362.5	1062	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	4.12795348811006	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCAACCTTGGCCCCTCT	104223278	True	NA	NA	False	NA	NA	NA	104223363	104251736	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_104223794_104244915_104245058_104248700_104248814_104249486_104249589_104251023_104251164_104251601
transcript_190828.known	chr8	-	2122	10	FSM	ENSG00000147647.13	ENST00000351513.7	2122	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	1.31468439624436	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTATTATCTGATTTAT	-104466916	True	NA	NA	False	AATAAA	-20	NA	104467055	104379430	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_104379844_104381183_104381315_104392783_104392992_104424246_104424390_104427979_104428122_104429544_104429702_104444247_104444438_104447323_104447504_104451245_104451405_104466656
transcript_19083.known	chr1	-	5893	2	FSM	ENSG00000170385.10	ENST00000367001.5	5893	2	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	0	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATTTGTGCATATGGCC	-211577743	True	NA	-4	True	AATAAA	-17	NA	211579161	211571567	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_211576290_211577990
transcript_190830.known	chr8	-	4378	7	FSM	ENSG00000147650.12	ENST00000276654.10	4378	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_6	17.2884033065199	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGCTGTTCTTTATTTG	-104588994	True	NA	-3	True	ATTAAA	-36	NA	104589258	104489235	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_104491540_104495076_104495210_104496971_104498077_104499316_104499520_104508938_104509075_104531906_104531964_104588818
transcript_190832.known	chr8	-	4092	6	FSM	ENSG00000147650.12	ENST00000424843.6	4092	6	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_5	25.7138095194003	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTCTTTATTTGTTGAA	-104588760	False	NA	2	True	ATTAAA	-41	NA	104589024	104489230	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_104491540_104495076_104495210_104496971_104498077_104499316_104499520_104508938_104509075_104588818
transcript_190840.nic	chr8	+	3658	15	NIC	ENSG00000164830.19	novel	4406	14	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_9	20.7187187374714	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGGAAAAAAAAAATTGT	106656100	True	NA	NA	False	AATATA	-15	NA	106657849	106751861	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_106658186_106679209_106679293_106683198_106683307_106684245_106684360_106692727_106692878_106702905_106703091_106706381_106707146_106710621_106710791_106713822_106713986_106737519_106737601_106739457_106739584_106740342_106740496_106742221_106742318_106745788_106745863_106750805
transcript_190843.known	chr8	+	4406	14	FSM	ENSG00000164830.19	ENST00000312046.10	4406	14	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_9	22.0808090924566	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTTGGATTTATTGAAT	106656104	True	NA	NA	False	AATAAA	-21	NA	106657853	106752694	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_106658186_106679209_106679293_106683198_106683307_106684245_106684360_106692727_106692878_106702905_106703091_106706381_106707146_106710621_106710791_106713822_106713986_106739457_106739584_106740342_106740496_106742221_106742318_106745788_106745863_106750805
transcript_190846.known	chr8	+	1944	7	FSM	ENSG00000164830.19	ENST00000297447.10	1944	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	41.0301379746915	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATGAAAAGATAGAATA	NA	False	NA	NA	False	NA	NA	NA	106726106	106752016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_106726310_106737519_106737601_106739457_106739584_106740342_106740496_106742221_106742318_106745788_106745863_106750805
transcript_190849.known	chr8	+	2621	6	FSM	ENSG00000164830.19	ENST00000449762.6	2621	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	39.8878427594173	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACAGAAATACAAATGAGT	NA	False	NA	NA	False	AATAAA	-6	NA	106726011	106752679	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_106726310_106739457_106739584_106740342_106740496_106742221_106742318_106745788_106745863_106750805
transcript_190855.nnic	chr8	+	1110	2	NNC	ENSG00000164830.19	novel	1148	2	NA	NA	-69	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	0	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGGCTTTTATGGCTAT	NA	False	NA	15	True	AATAAA	-17	NA	106270074	106272774	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_106270368_106271957
transcript_190857.known	chr8	+	1148	2	FSM	ENSG00000164830.19	ENST00000658832.1	1148	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGGCTTTTATGGCTAT	106270266	True	NA	15	True	AATAAA	-17	NA	106270289	106272774	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_106270368_106271704
transcript_190858.known	chr8	+	1174	2	FSM	ENSG00000164830.19	ENST00000661818.1	1174	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTGTATTGTTTTGTTT	106270267	True	NA	NA	False	AATAAA	-17	NA	106270290	106272902	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_106270368_106271805
transcript_19086.known	chr1	-	2134	8	FSM	ENSG00000117650.13	ENST00000366999.9	2134	8	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	11.8321595661992	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGTGTCTTGCATTTGT	-211673074	True	NA	0	True	AATAAA	-23	NA	211675621	211662771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_211663653_211667105_211667232_211669112_211669333_211670280_211670408_211671201_211671285_211673482_211673724_211674295_211674514_211675383
transcript_190860.known	chr8	-	4230	9	FSM	ENSG00000154188.10	ENST00000517746.6	4230	9	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_5	5.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATTTTATTTTTAATAC	-107497624	True	NA	NA	False	AATAAA	-23	NA	107497918	107249481	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_107252016_107264220_107264352_107284681_107284849_107293935_107294038_107303239_107303368_107321895_107322129_107336149_107336272_107346941_107347098_107497261
transcript_190861.known	chr8	-	4353	9	FSM	ENSG00000154188.10	ENST00000297450.7	4353	9	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_8	4.789311015167	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTGCAACTTCATTTT	-107497761	False	NA	NA	False	AATAAA	-12	NA	107498055	107249492	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_107252016_107264220_107264352_107284681_107284849_107293935_107294038_107303239_107303368_107321898_107322129_107336149_107336272_107346941_107347098_107497261
transcript_190866.known	chr8	-	2105	14	FSM	ENSG00000104408.11	ENST00000677674.1	2105	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1425.26093946411	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCATGGTATTGATGTG	-108209455	True	NA	NA	False	NA	NA	NA	108248719	108201215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108219749_108219831_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
transcript_190867.known	chr8	-	1732	14	FSM	ENSG00000104408.11	ENST00000518100.6	1732	14	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_13	1363.4735314651	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCAGTTTTCTTGCAT	-108209452	True	NA	-25	True	AATAAA	-18	NA	108248716	108201739	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108242111_108242347_108248612
transcript_190868.known	chr8	-	1663	14	FSM	ENSG00000104408.11	ENST00000518345.2	1663	14	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_13	1381.88250384679	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGATTCATTTTATCTT	-108209466	True	NA	-44	True	TATAAA	-19	NA	108248730	108201758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108243292_108243464_108248612
transcript_190871.known	chr8	-	1501	13	FSM	ENSG00000104408.11	ENST00000676698.1	1501	13	0	0	0	0	multi-exon	FALSE	canonical	2	45	junction_1	1087.26798291252	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCTGTCAGTTTTCTTG	-108209466	True	NA	-28	True	AATAAA	-15	NA	108248730	108201742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_108201924_108202989_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
transcript_190872.known	chr8	-	1275	13	FSM	ENSG00000104408.11	ENST00000677272.1	1275	13	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_11	1089.90140672856	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAGAAAAGATGAAAAAAA	-108209455	True	NA	NA	False	NA	NA	NA	108248719	108201877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241885_108241914_108248612
transcript_190876.known	chr8	-	1485	13	FSM	ENSG00000104408.11	ENST00000522445.6	1485	13	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_11	1089.63097728849	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTGAAGAATTGGAATAAA	-108209454	True	NA	-62	True	TATAAA	-40	NA	108248718	108201776	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240099_108241798_108241914_108248612
transcript_190877.known	chr8	-	2107	13	FSM	ENSG00000104408.11	ENST00000676892.1	2107	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1091.12224019839	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCATGGTATTGATGTG	-108209511	True	NA	NA	False	NA	NA	NA	108248775	108201215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_108201924_108202982_108203145_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
transcript_190878.known	chr8	-	1394	12	FSM	ENSG00000104408.11	ENST00000519030.6	1394	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_11	1126.36626311235	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTGCTGTCAGTTTTCT	-108209469	True	NA	-30	True	AATAAA	-13	NA	108248733	108201744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108248612
transcript_19088.nic	chr1	-	2144	8	NIC	ENSG00000117650.13	novel	2134	8	NA	NA	-33	-8	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	38.4144955633646	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTAGTTATGTGTCTT	NA	False	NA	-8	True	AATAAA	-15	NA	211675663	211662779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_211663629_211667105_211667232_211669112_211669333_211670280_211670408_211671201_211671285_211673482_211673724_211674295_211674514_211675383
transcript_190884.known	chr8	-	2307	12	FSM	ENSG00000104408.11	ENST00000523674.2	2307	12	0	0	0	0	multi-exon	FALSE	canonical	3	3591	junction_5	231.211469874773	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCATGGTATTGATGTG	-108209455	True	NA	NA	False	NA	NA	NA	108248719	108201215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_108201924_108202982_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
transcript_190885.known	chr8	-	2485	12	FSM	ENSG00000104408.11	ENST00000678901.1	2485	12	0	0	0	0	multi-exon	FALSE	canonical	3	3591	junction_5	237.96499499501	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTTACATTTTGGAAACA	-108209454	True	NA	-98	True	AATAAA	-17	NA	108248718	108201812	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
transcript_190886.known	chr8	-	2467	11	FSM	ENSG00000104408.11	ENST00000678773.1	2467	11	0	0	0	0	multi-exon	FALSE	canonical	2	95	junction_10	1124.30204571547	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTATTTACAAAAACAGGC	-108209466	True	NA	NA	False	NA	NA	NA	108248730	108200550	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108248612
transcript_190888.known	chr8	-	1158	10	FSM	ENSG00000104408.11	ENST00000521297.2	1158	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	1255.16619331446	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCTGTCAGTTTTCTTG	-108209455	True	NA	-28	True	AATAAA	-15	NA	108248719	108201742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
transcript_190890.known	chr8	-	1121	9	FSM	ENSG00000104408.11	ENST00000519627.2	1121	9	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_8	1223.03213750702	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTGCTGTCAGTTTTCT	-108209462	True	NA	-30	True	AATAAA	-13	NA	108248726	108201744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108248612
transcript_190893.known	chr8	-	2509	7	FSM	ENSG00000104408.11	ENST00000677746.1	2509	7	0	0	0	0	multi-exon	FALSE	canonical	3	3689	junction_1	212.178122235907	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTACGCCTGTAATTTCA	-108209441	True	NA	NA	False	NA	NA	NA	108248705	108226482	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
transcript_190895.known	chr8	-	4050	6	FSM	ENSG00000104408.11	ENST00000677447.1	4050	6	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	1571.52290470104	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTAGACATGTATTCTTC	-108209466	True	NA	1	True	ATTAAA	-19	NA	108248730	108230121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_108233673_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
transcript_190900.known	chr8	-	527	4	FSM	ENSG00000104408.11	ENST00000522352.6	527	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	1857.18520586636	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCTGTCAGTTTTCTTG	-108209456	True	NA	-28	True	AATAAA	-15	NA	108248720	108201742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108248612
transcript_190902.known	chr8	-	1609	14	FSM	ENSG00000104408.11	ENST00000676642.1	1609	14	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_13	1607.08969567378	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATATTACGTATAAATTT	-108209452	True	NA	-79	True	AATAAA	-36	NA	108248716	108201793	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235098_108236160_108236204_108239957_108240076_108241798_108241914_108243292_108243464_108248612
transcript_190905.known	chr8	+	3527	11	FSM	ENSG00000104412.8	ENST00000220853.8	3527	11	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_6	36.2403090494549	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTTTCCTGTTACTT	108437445	True	NA	17	True	AATAAA	-21	NA	108443623	108489196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_108443699_108449822_108449937_108450427_108450493_108453061_108453148_108455872_108455931_108469825_108469912_108470061_108470122_108475881_108475964_108476781_108476893_108479005_108479111_108486511
transcript_190909.known	chr8	-	6283	2	FSM	ENSG00000164841.5	ENST00000297459.4	6283	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGGTTTGTCATTCTTCT	-108786785	True	NA	0	True	ATTAAA	-19	NA	108787594	108778973	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_108785138_108787475
transcript_190913.known	chr8	-	3811	10	FSM	ENSG00000120526.12	ENST00000678094.1	3811	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	168.719652049352	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATATAGTACCTTGTATT	-109324238	True	NA	-109	True	NA	NA	NA	109334121	109241020	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_109243302_109245321_109245442_109271004_109271131_109275351_109275497_109280967_109281173_109289750_109289934_109293343_109293525_109296383_109296570_109322308_109322464_109333892
transcript_190916.known	chr8	-	3919	10	FSM	ENSG00000120526.12	ENST00000239690.9	3919	10	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_6	42.1841934003663	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAGAGTCATTAACAAT	-109324204	True	NA	-7	True	AATAAA	-23	NA	109334087	109240918	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_109243302_109245321_109245482_109271004_109271131_109275351_109275497_109280967_109281173_109289750_109289934_109293343_109293525_109296383_109296570_109322308_109322464_109333892
transcript_19092.known	chr1	-	1318	8	FSM	ENSG00000117650.13	ENST00000540251.5	1318	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	47.7279706636839	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGCCTCGTAGGCTCAA	-211673083	True	NA	NA	False	NA	NA	NA	211675630	211658656	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_211658713_211667105_211667232_211669112_211669333_211670280_211670408_211671201_211671285_211673482_211673724_211674295_211674514_211675383
transcript_190922.nic	chr8	-	748	4	ISM	ENSG00000120526.12	ENST00000677737.1	2384	10	-15	42090	-2	-17934	5prime_fragment	FALSE	canonical	3	492	junction_3	14.522013940528	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAGGTAAAACAAAAGTCT	-109324240	True	NA	NA	False	AAGAAA	-3	NA	109334123	109293348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_109293525_109296383_109296570_109322308_109322464_109333892
transcript_190923.known	chr8	+	567	5	FSM	ENSG00000120533.13	ENST00000522766.5	567	5	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_3	1442.82890531067	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTAAATGTGTTATTTT	109310458	True	NA	-19	True	NA	NA	NA	109334323	109343624	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_109334403_109336127_109336205_109339319_109339391_109340443_109340564_109343404
transcript_190924.known	chr8	+	562	5	FSM	ENSG00000120533.13	ENST00000521662.5	562	5	0	0	0	0	multi-exon	FALSE	canonical	3	736	junction_1	1171.19455578482	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGAAGTTTGCTTGGATT	109310458	True	NA	21	True	AATAAA	-15	NA	109334323	109343664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_109334403_109336127_109336205_109339319_109339391_109340488_109340564_109343404
transcript_190926.known	chr8	+	2966	5	FSM	ENSG00000120533.13	ENST00000517311.5	2966	5	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_3	1269.94830111308	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTGACTCACATGATTGA	109310460	True	NA	12	True	AATAAA	-15	NA	109334325	109345953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_109334475_109336127_109336205_109339319_109339391_109340443_109340564_109343404
transcript_190927.known	chr8	+	1540	5	FSM	ENSG00000120533.13	ENST00000523335.1	1540	5	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_3	1285.7204935366	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAATGGTACCTCCTAGC	109310485	True	NA	NA	False	NA	NA	NA	109334350	109344599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_109334475_109336127_109336205_109339319_109339391_109340490_109340564_109343404
transcript_190931.known	chr8	+	1467	7	FSM	ENSG00000147654.15	ENST00000395785.6	1467	7	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	39.1648935768871	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTTTGTACATCATTA	109539253	True	NA	NA	False	ATTAAA	-22	NA	109539710	109565160	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_109539920_109550809_109550908_109553864_109553944_109554728_109554888_109556934_109557043_109560837_109560930_109564438
transcript_190936.known	chr8	+	2383	7	FSM	ENSG00000147654.15	ENST00000337573.10	2383	7	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	51.9575146955023	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGGCTCAAAGTTTTAATA	109539177	False	NA	NA	False	AATAAA	-19	NA	109540172	109565996	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_109540462_109550809_109550908_109553864_109553944_109554728_109554888_109556934_109557043_109560837_109560930_109564438
transcript_190965.known	chr8	+	730	3	FSM	ENSG00000254339.6	ENST00000519248.1	730	3	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_2	902	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGAAAAAAAAGTCTTCTT	114265275	False	NA	NA	False	NA	NA	NA	114282135	114287996	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_114282295_114284218_114284515_114287721
transcript_190968.known	chr8	+	866	3	FSM	ENSG00000254339.6	ENST00000521523.5	866	3	0	0	0	0	multi-exon	FALSE	canonical	3	895	junction_2	592	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGTTTATCATGGAAGTAT	114265206	True	NA	NA	False	NA	NA	NA	114282066	114295807	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_114282295_114284218_114284515_114295465
transcript_19097.known	chr1	-	7773	8	FSM	ENSG00000123684.13	ENST00000366997.9	7773	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_7	9.4846815272559	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGGTAACCTTGTTCTTA	-211829720	True	NA	0	True	AATAAA	-17	NA	211830763	211743456	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_211750051_211750960_211751068_211778917_211779045_211783228_211783503_211787631_211787728_211793071_211793191_211829058_211829324_211830572
transcript_190970.nnic	chr8	+	756	3	NIC	ENSG00000254339.6	novel	730	3	NA	NA	-60	-152	combination_of_known_splicesites	FALSE	canonical	3	175	junction_2	952	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCATCATATTCTTCATC	114281211	False	NA	9	True	ATTAAA	-20	NA	114281976	114287844	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_114282295_114284218_114284534_114287721
transcript_190972.known	chr8	+	697	3	FSM	ENSG00000254339.6	ENST00000507929.3	1734	3	0	1037	0	-183	multi-exon	FALSE	canonical	3	876	junction_2	601.5	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTAGCAAGTTTGAATAGC	114265211	True	NA	NA	False	NA	NA	NA	114282071	114295624	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_114282295_114284218_114284534_114295465
transcript_190974.nnic	chr8	+	1037	3	FSM	ENSG00000254339.6	ENST00000692282.1	925	3	-112	0	-72	0	multi-exon	FALSE	canonical	3	333	junction_2	873	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGTGCTAGGTGTGCTA	114281199	False	NA	NA	False	AATAAA	-14	NA	114281964	114304805	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_114282295_114284218_114284534_114304413
transcript_190975.nnic	chr8	+	2135	3	FSM	ENSG00000254339.6	ENST00000692282.1	925	3	-69	-1141	-29	1141	multi-exon	FALSE	canonical	3	333	junction_2	873	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAATGTAGCAGTTTACAT	114281681	False	NA	11	True	AATAAA	-21	NA	114282007	114305946	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_114282295_114284218_114284534_114304413
transcript_190979.known	chr8	+	836	3	FSM	ENSG00000254339.6	ENST00000523682.1	836	3	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_1	238	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCATGGAAGTATTTCAAA	114265208	True	NA	NA	False	NA	NA	NA	114282068	114295813	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_114282295_114284252_114284515_114295465
transcript_190983.known	chr8	+	877	3	FSM	ENSG00000254339.6	ENST00000520543.1	877	3	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_1	228.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAATGAATATTGATTAT	114265212	True	NA	NA	False	NA	NA	NA	114282072	114295839	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_114282295_114284252_114284534_114295465
transcript_190985.nnic	chr8	+	1003	3	NIC	ENSG00000254339.6	novel	925	3	NA	NA	-72	0	combination_of_known_junctions	FALSE	canonical	3	333	junction_2	43	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGTGCTAGGTGTGCTA	114281199	False	NA	NA	False	AATAAA	-14	NA	114281964	114304805	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_114282295_114284252_114284534_114304413
transcript_19100.known	chr1	-	3380	20	FSM	ENSG00000143493.13	ENST00000366992.7	3380	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	35.8036349692082	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAACTGGGATCCTGG	-212032906	True	NA	-22	True	AATAAA	-18	NA	212035520	211941355	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_211942112_211944783_211944970_211946606_211946646_211952568_211952702_211966429_211966499_211967877_211967982_211968512_211968708_211975165_211975373_211976581_211976720_211978271_211978512_211981092_211981191_211982675_211982811_211987885_211988004_212006638_212006762_212007249_212007450_212011374_212011422_212016885_212017024_212020121_212020269_212021082_212021213_212035343
transcript_191007.known	chr8	-	5480	6	FSM	ENSG00000104447.13	ENST00000220888.9	5480	6	0	0	0	0	multi-exon	TRUE	canonical	1	5	junction_1	1.54919333848297	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTATTTTTCTAGTAA	-115668637	False	NA	NA	False	ATTAAA	-28	NA	115668702	115412548	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_115415085_115418329_115418453_115587000_115587605_115603872_115605003_115619131_115620061_115668544
transcript_191010.known	chr8	-	1265	9	NNC	ENSG00000147677.12	novel	3961	8	NA	NA	0	16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	751.92432298736	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAGATGTATTTTCTCT	-116738331	True	NA	-11	True	AATAAA	-33	NA	116755823	116644816	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_-_116645104_116646470_116646604_116648805_116648927_116655855_116656006_116657214_116657315_116658812_116658981_116726015_116726161_116737712_116737716_116755665
transcript_191013.known	chr8	-	3961	8	FSM	ENSG00000147677.12	ENST00000521861.6	3961	8	0	0	0	0	multi-exon	FALSE	canonical	3	1636	junction_5	79.1758569674532	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTATGTAATACACTGT	-116738331	True	NA	-2	True	AATAAA	-16	NA	116755823	116642129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_116645104_116646470_116646604_116648805_116648927_116655855_116656006_116657214_116657315_116658812_116658981_116726015_116726173_116755665
transcript_19102.known	chr1	-	4430	20	FSM	ENSG00000143493.13	ENST00000366994.8	4430	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	35.8036349692082	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTTGCCTTTTTCTCT	-212032943	True	NA	-5	True	AATAAA	-17	NA	212035557	211940402	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_211942112_211944783_211944970_211946606_211946706_211952568_211952702_211966429_211966499_211967877_211967982_211968512_211968708_211975165_211975373_211976581_211976720_211978271_211978512_211981092_211981191_211982675_211982811_211987885_211988004_212006638_212006762_212007249_212007450_212011374_212011422_212016885_212017024_212020121_212020269_212021082_212021213_212035343
transcript_191023.known	chr8	-	3660	14	FSM	ENSG00000164754.16	ENST00000297338.7	3660	14	0	0	0	0	multi-exon	FALSE	canonical	3	872	junction_13	77.9100528260695	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTGAGTATTCATTAT	-116864589	True	NA	-1	True	AATAAA	-20	NA	116874776	116845933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_116847692_116848945_116849030_116850617_116850768_116851947_116852097_116852548_116852709_116854244_116854469_116856165_116856289_116856645_116856772_116857266_116857474_116858351_116858459_116861840_116861941_116863129_116863260_116866585_116866762_116874610
transcript_191034.nic	chr8	-	1867	12	ISM	ENSG00000164754.16	ENST00000297338.7	3660	14	-94	4729	-94	-538	5prime_fragment	FALSE	canonical	3	872	junction_11	83.2347074778642	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGGAGAAAGAGAAGGA	-116874841	False	NA	-10	True	NA	NA	NA	116874870	116850662	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_116850768_116851947_116852097_116852548_116852709_116854244_116854469_116856165_116856289_116856645_116856772_116857266_116857474_116858351_116858459_116861840_116861941_116863129_116863260_116866585_116866762_116874610
transcript_191039.known	chr8	+	3672	3	FSM	ENSG00000147679.12	ENST00000309822.7	3672	3	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_2	12.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCATCTCCTTGTACTTC	116764241	True	NA	NA	False	ATTAAA	-17	NA	116766523	116774684	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_116766792_116770191_116770367_116771455
transcript_191046.known	chr8	+	563	3	FSM	ENSG00000147679.12	ENST00000517814.1	563	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	124	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACTAAATGCTGAAAAGAT	116764225	True	NA	NA	False	NA	NA	NA	116766507	116779586	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_116766792_116770191_116770367_116779482
transcript_191047.known	chr8	+	2291	2	FSM	ENSG00000205002.4	ENST00000378279.4	2291	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATCTGAGAATTATCTGG	NA	False	NA	NA	False	AATAAA	-45	NA	116938206	116944487	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_116938568_116942557
transcript_191049.known	chr8	+	985	4	FSM	ENSG00000164758.7	ENST00000297347.7	985	4	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_2	2.49443825784929	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGATTAATGGATTTAC	117518532	True	NA	14	True	AATAAA	-21	NA	117520712	117540262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_117521054_117528650_117528810_117530722_117530828_117539882
transcript_191050.known	chr8	-	8243	11	FSM	ENSG00000182197.13	ENST00000378204.7	8243	11	0	0	0	0	multi-exon	TRUE	canonical	3	116	junction_10	12.0995867698033	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTGGTTTTCATTCCA	-118108493	True	NA	1	True	AATAAA	-16	NA	118111826	117794489	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_117799898_117804721_117804894_117807216_117807378_117812871_117812962_117818434_117818531_117819675_117819795_117822464_117822598_117830229_117830350_117835443_117835552_117837107_117837202_118110084
transcript_191052.known	chr8	-	782	5	FSM	ENSG00000177570.15	ENST00000524796.6	782	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	11.3880419739304	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAAAATCTTGCTTTGCT	-118620465	True	NA	NA	False	AAAAAG	-28	NA	118621949	118197546	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_118197733_118379559_118379701_118439831_118439962_118580714_118580894_118621803
transcript_191055.known	chr8	-	2087	5	FSM	ENSG00000164761.9	ENST00000297350.9	2087	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1.92028643696715	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTTTTTCTGTTGCTTTT	-118951838	False	47	-2	True	ATTAAA	-20	NA	118951885	118923556	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_118924763_118926493_118926719_118928737_118928930_118932930_118933301_118951791
transcript_191058.known	chr8	+	2826	4	FSM	ENSG00000147676.14	ENST00000614891.5	2826	4	0	0	0	0	multi-exon	FALSE	canonical	3	1174	junction_2	160.441751285492	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTGGTCATCTTTTAC	119198062	True	NA	30	True	AATAAA	-16	NA	119208362	119245673	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_119208605_119221586_119221758_119240164_119240321_119243416
transcript_191060.known	chr8	+	892	4	FSM	ENSG00000147676.14	ENST00000531508.1	892	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	661.109673201051	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTTAATTTTATTATGAT	119208827	False	NA	-37	True	NA	NA	NA	119208867	119243648	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_119209201_119221586_119221758_119240164_119240321_119243416
transcript_191061.nnic	chr8	+	800	3	NIC	ENSG00000147676.14	novel	2826	4	NA	NA	-25	145	combination_of_known_splicesites	FALSE	canonical	3	124	junction_1	721.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTATCCCTTTTGTTTGG	119198037	True	NA	5	True	CATAAA	-26	NA	119208337	119243793	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_119208605_119240164_119240321_119243416
transcript_191062.nnic	chr8	+	2680	3	NIC	ENSG00000147676.14	novel	2826	4	NA	NA	-25	0	intron_retention	FALSE	canonical	3	124	junction_1	721.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTGGTCATCTTTTAC	119198037	True	NA	30	True	AATAAA	-16	NA	119208337	119245673	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_119208605_119240164_119240321_119243416
transcript_191063.known	chr8	+	2463	5	FSM	ENSG00000136999.5	ENST00000259526.4	2463	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.06155281280883	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGACATCAATCAATAGCA	119416412	True	NA	NA	False	AATAAA	-21	NA	119416445	119424434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_119416617_119416743_119416970_119418057_119418310_119419130_119419346_119422835
transcript_191064.known	chr8	-	3271	26	FSM	ENSG00000136960.13	ENST00000427067.6	3271	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	8.13328961736885	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTTTTATTTGGCTTT	-119673393	True	NA	-1	True	AATAAA	-17	NA	119673453	119557085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_119557692_119562856_119563014_119564822_119564956_119568174_119568253_119569234_119569371_119570704_119570842_119572175_119572251_119580115_119580168_119582417_119582603_119583716_119583805_119583961_119584050_119586185_119586314_119587043_119587076_119590504_119590631_119593751_119593861_119600677_119600751_119601396_119601463_119607921_119607978_119616264_119616385_119617163_119617244_119617465_119617564_119619243_119619305_119621393_119621520_119626564_119626721_119638424_119638528_119673251
transcript_191066.known	chr8	-	3086	25	FSM	ENSG00000136960.13	ENST00000075322.11	3086	25	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_7	5.58208941367139	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTTTTATTTGGCTTT	-119638750	True	NA	-1	True	AATAAA	-17	NA	119638839	119557085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_119557692_119562856_119563014_119564822_119564956_119568174_119568253_119569234_119569371_119570704_119570842_119580115_119580168_119582417_119582603_119583716_119583805_119583961_119584050_119586185_119586314_119587043_119587076_119590504_119590631_119593751_119593861_119600677_119600751_119601396_119601463_119607921_119607978_119616264_119616385_119617163_119617244_119617465_119617564_119619243_119619305_119621393_119621520_119626564_119626721_119638424_119638528_119638747
transcript_191067.nic	chr8	-	3196	25	NIC	ENSG00000136960.13	novel	3271	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_7	5.51513070259143	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTTTTATTTGGCTTT	-119673393	True	NA	-1	True	AATAAA	-17	NA	119673453	119557085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_119557692_119562856_119563014_119564822_119564956_119568174_119568253_119569234_119569371_119570704_119570842_119580115_119580168_119582417_119582603_119583716_119583805_119583961_119584050_119586185_119586314_119587043_119587076_119590504_119590631_119593751_119593861_119600677_119600751_119601396_119601463_119607921_119607978_119616264_119616385_119617163_119617244_119617465_119617564_119619243_119619305_119621393_119621520_119626564_119626721_119638424_119638528_119673251
transcript_191069.nic	chr8	-	3452	25	NIC	ENSG00000136960.13	novel	3271	26	NA	NA	-268	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_7	5.40816640728527	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTTTTATTTGGCTTT	NA	False	NA	-1	True	AATAAA	-17	NA	119673721	119557085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_119557692_119562856_119563014_119564822_119564956_119568174_119568253_119569234_119569371_119570704_119570842_119580115_119580168_119582429_119582603_119583716_119583805_119583961_119584050_119586185_119586314_119587043_119587076_119590504_119590631_119593751_119593861_119600677_119600751_119601396_119601463_119607921_119607978_119616264_119616385_119617163_119617244_119617465_119617564_119619243_119619305_119621393_119621520_119626564_119626721_119638424_119638528_119673251
transcript_191078.known	chr8	-	5027	26	FSM	ENSG00000064313.13	ENST00000378164.7	5027	26	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_25	33.4137696167314	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCTGTCTTTGTAGCTT	-119828126	True	NA	-2	True	AATAAA	-17	NA	119832841	119730773	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_119732187_119742533_119742657_119744287_119744394_119746704_119746935_119756005_119756116_119758072_119758143_119760598_119760739_119762414_119762609_119778018_119778130_119781052_119781194_119783380_119783634_119785200_119785267_119788337_119788448_119788789_119788905_119789591_119789747_119791323_119791460_119793365_119793452_119795531_119795632_119796989_119797104_119797661_119797847_119801793_119802026_119803877_119804020_119806282_119806402_119819345_119819507_119831676_119831732_119832481
transcript_191091.nic	chr8	-	2078	14	ISM	ENSG00000064313.13	ENST00000690144.1	5377	26	-10	57302	-2	6372	5prime_fragment	FALSE	canonical	0	0	junction_13	35.0117478170842	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCCAAAAGTAGAAGGTAG	-119828150	True	NA	-17	True	AAGAAA	-28	NA	119832865	119788353	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_119788448_119788789_119788905_119789591_119789747_119791323_119791460_119793365_119793452_119795531_119795632_119796989_119797104_119797661_119797847_119801793_119802026_119803877_119804020_119806282_119806402_119819345_119819507_119831676_119831732_119832481
transcript_19110.nic	chr1	-	2810	17	ISM	ENSG00000143493.13	ENST00000366993.7	3422	20	-120	10946	-99	133	5prime_fragment	FALSE	canonical	3	131	junction_4	12.6910401464971	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAACTGAAGTTGCAATAA	-212033042	True	NA	-3	True	AATAAA	-21	NA	212035656	211952293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_211952702_211966429_211966499_211967877_211967982_211968512_211968708_211975165_211975373_211976581_211976720_211978271_211978512_211981092_211981191_211982675_211982811_211987885_211988004_212006638_212006762_212007249_212007450_212011374_212011422_212016885_212017024_212020121_212020269_212021082_212021213_212035343
transcript_191100.known	chr8	-	2198	9	FSM	ENSG00000136982.6	ENST00000313655.5	2198	9	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_7	21.8113359288238	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGGATTATATGATATATA	-119849940	True	NA	-34	True	AATAAA	-15	NA	119855894	119833975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_119835002_119838258_119838408_119841793_119841949_119842775_119842829_119843608_119843748_119846989_119847081_119850381_119850517_119853046_119853216_119855613
transcript_191108.nnic	chr8	-	1372	8	NIC	ENSG00000136982.6	novel	2198	9	NA	NA	9	-682	combination_of_known_splicesites	FALSE	canonical	2	10	junction_6	78.7087112363669	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATGTCTGAGGTCTCTA	-119849931	True	NA	-7	True	NA	NA	NA	119855885	119834657	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_119835002_119838258_119838408_119841793_119841949_119842775_119842829_119843608_119843748_119846989_119847081_119853046_119853216_119855613
transcript_191110.known	chr8	+	2569	9	FSM	ENSG00000155792.10	ENST00000286234.6	2569	9	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_8	6.40312423743285	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTTCTTTTCATTAGGT	119873687	False	NA	13	True	AATAAA	-20	NA	119873721	120050918	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_119873969_119928399_119928579_119929814_119929939_119965231_119965411_120001524_120001711_120002976_120003112_120006804_120006876_120009028_120009134_120049575
transcript_191113.known	chr8	+	8009	48	FSM	ENSG00000187955.13	ENST00000297848.8	8009	48	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_47	6.7565838990283	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTACTCTTCAGAATTCTC	120124159	True	NA	NA	False	AATAAA	-18	NA	120125101	120373573	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_120125341_120147805_120147931_120158129_120158247_120162425_120162570_120168160_120168248_120196790_120196947_120197810_120197931_120199401_120199567_120203708_120203871_120206942_120207095_120208231_120208362_120209755_120209902_120212447_120212578_120216350_120216491_120225087_120225215_120226626_120226767_120227219_120227353_120228709_120228770_120231466_120231619_120243878_120244009_120247612_120247736_120250616_120250767_120255239_120255357_120262867_120263015_120266826_120266884_120270034_120270175_120278110_120278235_120278434_120278579_120279934_120280100_120280710_120280750_120280920_120281060_120283635_120283779_120285860_120285971_120289607_120289767_120297510_120297589_120300731_120300819_120310008_120310063_120313931_120314028_120315532_120315587_120315943_120315998_120332140_120332195_120332663_120332736_120341324_120341361_120342379_120342447_120345374_120345564_120367170_120367249_120369329_120369486_120371151
transcript_191116.known	chr8	+	6163	48	FSM	ENSG00000187955.13	ENST00000309791.8	6163	48	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	6.55498731956209	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGGTTATGATTCTAGT	120124165	True	NA	6	True	AATAAA	-15	NA	120125107	120370917	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_120125341_120147805_120147931_120158129_120158247_120162425_120162570_120168160_120168248_120196790_120196947_120197810_120197931_120199401_120199567_120203708_120203871_120206942_120207095_120208231_120208362_120209755_120209902_120212447_120212578_120216350_120216491_120225087_120225215_120226626_120226767_120227219_120227353_120228709_120228770_120231466_120231619_120243878_120244009_120247612_120247736_120250616_120250767_120255239_120255357_120262867_120263015_120266826_120266884_120270034_120270175_120278110_120278235_120278434_120278579_120279934_120280100_120280710_120280750_120280920_120281060_120283635_120283779_120285860_120285971_120289607_120289767_120297510_120297589_120300731_120300819_120310008_120310063_120313931_120314028_120315532_120315587_120315943_120315998_120332140_120332195_120332663_120332736_120341324_120341361_120342379_120342447_120345374_120345564_120367170_120367249_120369329_120369486_120370335
transcript_191118.known	chr8	-	4941	7	FSM	ENSG00000172164.15	ENST00000517992.2	4941	7	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	8.18026079453868	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCAGTGCAGAAGTTTAT	-120811969	False	166	-10	True	AATAAA	-14	NA	120812046	120535755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_120538970_120541809_120542001_120548761_120548959_120575085_120575226_120632443_120632652_120693691_120693909_120811272
transcript_191122.known	chr8	+	3067	22	FSM	ENSG00000172167.8	ENST00000305949.6	3067	22	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_17	14.3789024082897	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGGATTTCATGTCTT	120442817	True	NA	NA	False	AATAAA	-19	NA	120445418	120523636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_120445589_120446432_120446514_120451002_120451077_120451170_120451323_120453846_120453906_120455434_120455580_120456552_120456671_120459214_120459350_120461160_120461256_120463691_120463762_120470819_120470938_120488158_120488333_120490462_120490571_120497392_120497555_120502491_120502610_120506705_120506862_120509933_120510030_120515924_120516192_120517850_120518101_120518703_120518818_120522653_120522720_120523297
transcript_191129.known	chr8	-	1260	7	FSM	ENSG00000172172.8	ENST00000306185.8	1260	7	0	0	0	0	multi-exon	FALSE	canonical	3	1656	junction_4	74.6445279679332	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTTAGATTGGGGTGCT	-120436662	True	NA	NA	False	NA	NA	NA	120445150	120395436	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_120396126_120413990_120414113_120419851_120419939_120425305_120425367_120432029_120432124_120443184_120443309_120445067
transcript_191131.known	chr8	-	1418	6	FSM	ENSG00000172172.8	ENST00000518696.5	1418	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	698.497931278254	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTTAGATTGGGGTGCT	-120444839	True	NA	NA	False	NA	NA	NA	120445402	120395436	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_120396126_120413990_120414113_120419851_120419939_120425305_120425367_120443184_120443309_120445067
transcript_191132.nic	chr8	-	507	6	ISM	ENSG00000172172.8	ENST00000306185.8	1260	7	0	18618	0	-64	5prime_fragment	FALSE	canonical	3	1656	junction_3	81.2467845517593	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTAAACGTCTAGATGAG	-120436662	True	NA	5	True	NA	NA	NA	120445150	120414054	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_120414113_120419851_120419939_120425305_120425367_120432029_120432124_120443184_120443309_120445067
transcript_191134.known	chr8	+	1981	4	FSM	ENSG00000172167.8	ENST00000522308.1	1981	4	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	6.48074069840786	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	120442820	True	NA	NA	False	NA	NA	NA	120445421	120452829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_120445589_120446432_120446514_120451002_120451077_120451170
transcript_191135.known	chr8	+	924	5	FSM	ENSG00000248690.8	ENST00000522197.2	924	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.6393596310755	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATATGTTTATATGTC	121639876	False	NA	NA	False	NA	NA	NA	121639901	121644455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_121640169_121641189_121641364_121642583_121642732_121643372_121643518_121644265
transcript_191136.known	chr8	-	4240	4	FSM	ENSG00000170961.7	ENST00000303924.5	4240	4	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	17.0163320241336	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGCCTTTTTTTCTAAG	-121641059	True	NA	0	True	AATAAA	-16	NA	121641440	121612115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_121615039_121617104_121617207_121628713_121629341_121640852
transcript_191138.nnic	chr8	+	4712	5	NNC	ENSG00000178764.8	novel	4361	4	NA	NA	-196	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	66.9603427410583	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTCCTCTACTTCGCCT	NA	False	NA	28	True	AATAAA	-24	NA	122781458	122974510	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_122781947_122863476_122863540_122873439_122873595_122951291_122954029_122973241
transcript_191139.known	chr8	+	4361	4	FSM	ENSG00000178764.8	ENST00000314393.6	4361	4	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_2	9.53356643071673	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTCCTCTACTTCGCCT	122780988	True	NA	28	True	AATAAA	-24	NA	122781654	122974510	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_122781947_122863476_122863540_122951291_122954029_122973241
transcript_191143.known	chr8	+	3478	22	FSM	ENSG00000156787.17	ENST00000287380.6	3478	22	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_11	35.6403679507437	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTAAGCTTTCAGGT	123070313	True	NA	14	True	AATAAA	-22	NA	123072706	123152153	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_123072847_123077110_123077258_123082701_123082818_123084161_123084341_123093590_123093743_123097281_123097442_123100806_123101008_123105287_123105465_123109316_123109397_123109473_123109621_123120054_123120189_123126055_123126190_123126507_123126688_123128280_123128514_123129065_123129219_123130197_123130334_123134113_123134207_123140760_123140902_123142261_123142457_123144716_123144856_123150035_123150129_123151805
transcript_191146.nic	chr8	+	3508	22	NIC	ENSG00000156787.17	novel	3478	22	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_14	42.3315388767461	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTAAGCTTTCAGGT	123070279	True	NA	14	True	AATAAA	-22	NA	123072672	123152153	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_123072847_123077110_123077258_123082701_123082818_123084161_123084341_123093590_123093743_123097281_123097442_123100806_123101008_123105287_123105465_123109316_123109397_123109473_123109621_123120054_123120189_123126055_123126190_123126507_123126688_123128280_123128514_123129069_123129219_123130197_123130334_123134113_123134207_123140760_123140902_123142261_123142457_123144716_123144856_123150035_123150129_123151805
transcript_19115.known	chr1	+	4409	15	FSM	ENSG00000143476.18	ENST00000366991.5	4409	15	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_10	15.0829339970439	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAGCATTTAAGATGGC	212029167	True	NA	8	True	AATAAA	-22	NA	212035747	212105013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_212035943_212042992_212043119_212044659_212044759_212047150_212047213_212047296_212047418_212062883_212062950_212064916_212065030_212066811_212066886_212068223_212068328_212068598_212068704_212072100_212072214_212078172_212078263_212080614_212080751_212100251_212101085_212102841
transcript_191153.known	chr8	+	3167	21	FSM	ENSG00000156787.17	ENST00000522420.5	3167	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	41.5721962373892	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAGAGACCTATTTTGCA	123070319	True	NA	NA	False	NA	NA	NA	123072712	123151964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_123072847_123077110_123077258_123084161_123084341_123093590_123093743_123097281_123097442_123100806_123101008_123105287_123105465_123109316_123109397_123109473_123109621_123120054_123120189_123126055_123126190_123126507_123126688_123128280_123128514_123129065_123129219_123130197_123130334_123134113_123134207_123140760_123140902_123142261_123142457_123144716_123144856_123150035_123150129_123151805
transcript_191163.nic	chr8	+	2290	8	NIC	ENSG00000156787.17	novel	2985	20	NA	NA	-66	-851	combination_of_known_junctions	FALSE	canonical	3	86	junction_7	34.7885742444151	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAATATCTGCTCTTACT	123070222	True	NA	1	True	AATAAA	-13	NA	123072615	123103350	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_123072847_123077110_123077258_123082701_123082818_123084161_123084341_123093590_123093743_123097281_123097442_123100806_123101008_123102246
transcript_191164.nic	chr8	+	3087	8	NIC	ENSG00000156787.17	novel	2985	20	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_7	34.7885742444151	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTCATGGTGTAAACAAG	123070276	True	NA	2	True	AATAAA	-33	NA	123072669	123104201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_123072847_123077110_123077258_123082701_123082818_123084161_123084341_123093590_123093743_123097281_123097442_123100806_123101008_123102246
transcript_191166.known	chr8	-	1994	8	FSM	ENSG00000136986.10	ENST00000405944.7	1994	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	127.78425695887	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCTTTTCACACAGTTAT	-123042106	False	NA	-5	True	AATAAA	-15	NA	123042122	123014148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_123015586_123019194_123019246_123021446_123021500_123022683_123022780_123023712_123023740_123024985_123025051_123030604_123030717_123041969
transcript_191167.known	chr8	-	3213	8	FSM	ENSG00000136986.10	ENST00000259512.9	3213	8	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_6	27.7892946646579	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAGTGAGGAGTCATAT	-123036742	True	NA	NA	False	AATGAA	-17	NA	123042302	123013169	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_123015586_123019194_123019306_123021446_123021500_123022683_123022780_123023712_123023740_123024985_123025051_123030604_123030717_123041969
transcript_191179.known	chr8	-	918	4	FSM	ENSG00000136986.10	ENST00000419562.6	918	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	171.930864658508	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATGGGTTTTAGCGGGT	-123036742	True	NA	36	True	NA	NA	NA	123042302	123015164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_123015586_123019194_123019306_123021446_123021500_123041969
transcript_191180.known	chr8	-	1310	6	FSM	ENSG00000189376.12	ENST00000276704.6	1310	6	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_3	12.2081939696255	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTACTGCATTCAGTTTA	-123237429	True	NA	-10	True	TATAAA	-43	NA	123241377	123219966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_123220298_123226499_123226633_123231299_123231758_123237797_123237942_123239048_123239145_123241229
transcript_191183.known	chr8	-	569	6	FSM	ENSG00000189376.12	ENST00000519791.5	569	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	57.2174798466343	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATTTGAAGACAAGTGG	-123237338	True	NA	NA	False	NA	NA	NA	123241286	123220194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_123220298_123226499_123226633_123231721_123231758_123237797_123237942_123239048_123239145_123241229
transcript_191186.nic	chr8	-	1234	6	NIC	ENSG00000189376.12	novel	948	5	NA	NA	-30	166	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	56.4645021230153	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATTTGTGTAGCAGTTC	-123237459	True	NA	NA	False	AATAAA	-16	NA	123241407	123226193	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_123226419_123226499_123226633_123231299_123231758_123237797_123237942_123239048_123239145_123241229
transcript_191189.known	chr8	-	948	5	FSM	ENSG00000189376.12	ENST00000521310.5	948	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_2	13.2853302555864	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTATCCCTCGGGTTTA	-123237396	True	NA	NA	False	NA	NA	NA	123241344	123226497	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_123226633_123231299_123231758_123237797_123237942_123239048_123239145_123241229
transcript_191192.known	chr8	-	5200	4	FSM	ENSG00000165156.15	ENST00000297857.3	5200	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	11.5181016954473	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTTTTTTTTCATTTTA	-123274451	False	NA	NA	False	AATAAA	-25	NA	123274487	123248450	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_123250321_123253321_123256172_123267272_123267387_123274121
transcript_191193.known	chr8	-	4899	4	FSM	ENSG00000165156.15	ENST00000395571.8	4899	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	7.25718035235908	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGACCTTTTTTTTTTCA	-123274017	True	NA	NA	False	AATAAA	-20	NA	123274286	123248455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_123250321_123253321_123256172_123267272_123267387_123274216
transcript_191194.known	chr8	-	1114	3	FSM	ENSG00000165156.15	ENST00000522595.5	1114	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	14	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATAACCAGACAATCTTT	-123274448	False	NA	NA	False	NA	NA	NA	123274484	123255534	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_123256172_123267272_123267387_123274121
transcript_191200.known	chr8	-	5547	28	FSM	ENSG00000156802.13	ENST00000287394.10	5547	28	0	0	0	0	multi-exon	TRUE	canonical	3	129	junction_21	25.8934187739369	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTCTATTTCTTAAGT	-123390113	True	NA	0	True	AATAAA	-26	NA	123396447	123319849	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_123321176_123322937_123323067_123325892_123326027_123328189_123328580_123333877_123334022_123334199_123334323_123336372_123336533_123337624_123337822_123339310_123339447_123344883_123345070_123346085_123346273_123346617_123346751_123347091_123347407_123348182_123348274_123349284_123349445_123356388_123356478_123357561_123357737_123359220_123359337_123359576_123359686_123361538_123361647_123369057_123369176_123369820_123370025_123370902_123370991_123371235_123371339_123371669_123371836_123372636_123372687_123380528_123380678_123396186
transcript_191205.nic	chr8	-	3231	20	ISM	ENSG00000156802.13	ENST00000287394.10	5547	28	-291	19465	-291	5198	5prime_fragment	FALSE	canonical	3	129	junction_13	18.3677424094208	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGTTAGTTTCTATATCA	NA	False	NA	NA	False	AAAAAG	-4	NA	123396738	123339314	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_123339447_123344883_123345070_123346085_123346273_123346617_123346751_123347091_123347407_123348182_123348274_123349284_123349445_123356388_123356478_123357561_123357737_123359220_123359337_123359576_123359686_123361538_123361647_123369057_123369176_123369820_123370025_123370902_123370991_123371235_123371339_123371669_123371836_123372636_123372687_123380528_123380678_123396186
transcript_191207.known	chr8	-	3133	19	FSM	ENSG00000156802.13	ENST00000521496.5	3133	19	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_12	18.8499598846873	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGGACGTGGTGGCTG	-123390067	True	NA	NA	False	AATACA	-8	NA	123396401	123344512	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_123345070_123346085_123346273_123346617_123346751_123347091_123347407_123348182_123348274_123349284_123349445_123356388_123356478_123357561_123357737_123359220_123359337_123359576_123359686_123361538_123361647_123369057_123369176_123369820_123370025_123370902_123370991_123371235_123371339_123371669_123371836_123372636_123372687_123380528_123380678_123396186
transcript_191212.nic	chr8	-	737	5	ISM	ENSG00000156802.13	ENST00000521496.5	3133	19	-54	26723	-8	1426	5prime_fragment	FALSE	canonical	3	150	junction_4	10.4253297309965	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATATATTCTTCCATTA	-123390121	True	NA	NA	False	AATGAA	-10	NA	123396455	123371235	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_123371339_123371669_123371836_123372636_123372687_123380528_123380678_123396186
transcript_191213.nic	chr8	-	485	3	ISM	ENSG00000156802.13	ENST00000521496.5	3133	19	-96	28149	-50	0	5prime_fragment	FALSE	canonical	3	150	junction_2	5.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAGAGCACAG	-123390163	True	NA	NA	False	AATATA	-27	NA	123396497	123372661	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_123372687_123380528_123380678_123396186
transcript_191218.known	chr8	+	909	7	FSM	ENSG00000156795.8	ENST00000517609.5	909	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	32.1126489443369	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGTACTTGCTAAGATATT	123415276	True	NA	52	True	CATAAA	-40	NA	123416791	123441623	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_123416857_123427923_123428024_123429982_123430034_123435441_123435543_123436452_123436602_123437209_123437335_123441305
transcript_191220.known	chr8	+	764	7	FSM	ENSG00000156795.8	ENST00000524254.5	764	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	28.8121309328014	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAGAAGAGCCACCATCAG	123415239	True	NA	NA	False	NA	NA	NA	123416754	123448091	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_123416857_123427923_123428024_123429982_123430034_123436452_123436602_123437209_123437335_123441305_123441498_123448046
transcript_191221.known	chr8	+	949	7	FSM	ENSG00000156795.8	ENST00000519199.5	949	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	32.2076595444831	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATGTCAAATTGAAACTT	123415285	True	NA	25	True	TATAAA	-26	NA	123416800	123441596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_123416933_123427923_123428024_123429982_123430034_123435441_123435543_123436452_123436602_123437209_123437335_123441305
transcript_191222.known	chr8	+	869	7	FSM	ENSG00000156795.8	ENST00000523356.1	869	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	36.0296945433748	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTTAATTTGATTGAGT	123415297	True	NA	-47	True	NA	NA	NA	123416812	123441524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_123416933_123427923_123428024_123429982_123430034_123436452_123436602_123437209_123437335_123438133_123438239_123441305
transcript_191223.known	chr8	+	1491	6	FSM	ENSG00000156795.8	ENST00000523984.5	1491	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	15.7480157480236	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGAACAACTTCTTATA	123415210	True	NA	NA	False	NA	NA	NA	123416725	123442240	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_123416857_123427923_123428024_123429982_123430034_123436452_123436602_123437209_123437335_123441305
transcript_191224.known	chr8	+	1519	6	FSM	ENSG00000156795.8	ENST00000287387.7	1519	6	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	12.6491106406735	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGAACAACTTCTTATA	123415258	True	NA	NA	False	NA	NA	NA	123416773	123442240	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_123416933_123427923_123428024_123429982_123430034_123436452_123436602_123437209_123437335_123441305
transcript_191227.known	chr8	-	6744	9	FSM	ENSG00000156804.7	ENST00000517956.5	6744	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	2.3418742493994	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTGCATTTTTAGT	-123541134	True	NA	NA	False	AATAAA	-17	NA	123541206	123497888	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_123503463_123504603_123504748_123506391_123506575_123513197_123513383_123514239_123514334_123531897_123531991_123533190_123533241_123534701_123534815_123540898
transcript_191228.known	chr8	-	1227	7	FSM	ENSG00000156804.7	ENST00000443022.2	1227	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.49443825784929	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTGCCAGCAAGACTATA	-123541134	True	NA	-16	True	AATAAA	-14	NA	123541206	123503126	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_123503463_123504603_123504748_123506391_123506575_123531897_123531991_123533190_123533241_123534701_123534815_123540898
transcript_19123.known	chr1	+	4471	14	FSM	ENSG00000143476.18	ENST00000542077.5	4471	14	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	97.3838862531946	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCAGACTTTGAGCATTTA	212035538	False	NA	1	True	AATAAA	-15	NA	212035552	212105006	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_212035943_212044659_212044759_212047150_212047213_212047296_212047418_212062883_212062950_212064916_212065030_212066811_212066886_212068223_212068328_212068598_212068704_212072100_212072214_212078172_212078263_212080614_212080751_212100251_212101085_212102841
transcript_191230.known	chr8	+	5529	24	FSM	ENSG00000176853.16	ENST00000334705.12	5529	24	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_21	9.88286787854244	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTAATTTTCTGAAAG	123765093	True	NA	20	True	AATAAA	-30	NA	123768438	123815452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_123768775_123774079_123774165_123775146_123775299_123777264_123777323_123778024_123778093_123778658_123778773_123779984_123780076_123780479_123780543_123784469_123784577_123785080_123785120_123785628_123785742_123786494_123786611_123787260_123787374_123787663_123787751_123789612_123789746_123798089_123798239_123799519_123799655_123799771_123799886_123805266_123805340_123806079_123806230_123808271_123808377_123808892_123809017_123810281_123810352_123812518
transcript_191234.known	chr8	+	2207	1	FSM	ENSG00000183665.5	ENST00000328599.4	2207	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGTTAAGAATCACCAGT	124450405	True	NA	NA	False	TATAAA	-22	NA	124450819	124453026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_124450800_124453000
transcript_191235.known	chr8	-	1767	1	FSM	ENSG00000245149.5	ENST00000530778.1	1767	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATGCTTCAGTCTTTA	-124474483	True	NA	NA	False	AATAAA	-30	NA	124474576	124472809	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_124472800_124474600
transcript_191236.known	chr8	-	4994	14	FSM	ENSG00000170873.19	ENST00000518547.6	4994	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	5.04066305397104	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGTATTTCAAGTCTTG	-124728101	True	NA	NA	False	AATAAA	-20	NA	124728473	124550783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_124553693_124555741_124555905_124556231_124556406_124557680_124557876_124562781_124562993_124565661_124565760_124567070_124567179_124568378_124568537_124585086_124585162_124589619_124589712_124591150_124591236_124699525_124699600_124704129_124704192_124727883
transcript_191242.nic	chr8	-	965	5	ISM	ENSG00000170873.19	ENST00000325064.9	2777	15	-307	36852	-107	0	5prime_fragment	FALSE	canonical	2	10	junction_4	1.4790199457749	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGGAAGAAAGTGGCCAAC	-124728566	False	NA	NA	False	GATAAA	-24	NA	124728580	124589664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_124589712_124591150_124591236_124699525_124699600_124704129_124704192_124727883
transcript_191243.known	chr8	-	707	3	FSM	ENSG00000170873.19	ENST00000472084.2	707	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATTGGGTTGTATCTAT	-124728004	False	NA	NA	False	CATAAA	-26	NA	124728018	124699089	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_124699600_124704129_124704192_124727883
transcript_191245.known	chr8	-	990	13	FSM	ENSG00000147687.19	ENST00000522810.5	990	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	145.998929790598	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAATACTATTAAAGTATT	-124534287	True	NA	-52	True	AATACA	-7	NA	124539070	124488629	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_124488697_124493832_124493960_124495471_124495543_124503839_124503952_124504274_124504348_124508473_124508515_124508602_124508689_124515745_124515789_124515886_124516031_124518817_124518882_124522150_124522201_124522936_124523003_124539024
transcript_191251.known	chr8	-	1029	12	FSM	ENSG00000147687.19	ENST00000276692.11	1029	12	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_11	48.2791469793932	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATACTATATATCGGTAC	-124534302	True	NA	80	True	AATAAA	-25	NA	124539085	124488497	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_124488697_124493832_124493960_124495471_124495543_124504270_124504348_124508473_124508515_124508602_124508689_124515745_124515789_124515886_124516031_124518817_124518882_124522150_124522201_124522936_124523003_124539024
transcript_191258.known	chr8	-	915	10	FSM	ENSG00000147687.19	ENST00000630259.1	915	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_8	130.809540181399	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAATACTATATATCGG	-124534305	True	NA	77	True	AATAAA	-22	NA	124539088	124488500	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_124488697_124493832_124493960_124495471_124495543_124504270_124504348_124508473_124508515_124508602_124508689_124515745_124515789_124515886_124516031_124522936_124523003_124539024
transcript_191259.known	chr8	-	726	9	FSM	ENSG00000147687.19	ENST00000605953.5	726	9	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_8	55.8993235647803	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGTGTGTTTGCATTG	-124534299	True	NA	-23	True	ATTAAA	-1	NA	124539082	124504173	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_124504348_124508473_124508515_124508602_124508689_124515745_124515789_124515886_124516031_124518817_124518882_124522150_124522201_124522936_124523003_124539024
transcript_191260.known	chr8	+	2743	5	FSM	ENSG00000147684.10	ENST00000676713.1	2743	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	1276.69345870495	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTCAAGCAGCAGCAGTC	124524526	True	NA	NA	False	AATAAA	-10	NA	124539177	124580637	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_124539288_124543088_124543280_124546999_124547114_124567646_124568915_124579577
transcript_191261.known	chr8	+	1423	4	FSM	ENSG00000147684.10	ENST00000677950.1	1423	4	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_1	1261.20497937488	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAAATACAGGACTTTTT	124524526	True	NA	NA	False	NA	NA	NA	124539177	124550768	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_124539288_124543088_124543280_124546999_124547114_124549760
transcript_191262.known	chr8	+	636	4	FSM	ENSG00000147684.10	ENST00000517367.1	636	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	1384.67428982013	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGTATGACTGACGTTC	124524492	True	NA	16	True	AATAAA	-17	NA	124539143	124549978	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_124539288_124543119_124543280_124546999_124547114_124549760
transcript_191263.known	chr8	-	690	7	FSM	ENSG00000147687.19	ENST00000520938.3	690	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	156.248111099694	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGTTAAAACCAAAGTCT	-124534305	True	NA	NA	False	NA	NA	NA	124539088	124508602	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_124508689_124515745_124515789_124515886_124516031_124518741_124518882_124522150_124522201_124522936_124523003_124538927
transcript_191266.known	chr8	+	3199	2	FSM	ENSG00000170881.5	ENST00000303545.4	3199	2	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	0	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTATTGTTATATAGTGT	124473383	True	NA	NA	False	NA	NA	NA	124474879	124488618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_124475291_124485830
transcript_191268.known	chr8	-	1134	13	FSM	ENSG00000147687.19	ENST00000523214.5	1134	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	147.799108214119	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGTCTAAAGAAATACTAT	-124534305	True	NA	70	True	AATAAA	-15	NA	124539088	124488507	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_124488697_124493832_124493960_124495471_124495543_124503839_124503952_124504270_124504348_124508473_124508515_124508602_124508689_124515745_124515789_124515886_124516031_124518817_124518882_124522150_124522201_124522936_124523003_124539024
transcript_191269.known	chr8	-	889	10	FSM	ENSG00000147687.19	ENST00000519548.5	889	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	130.458545518358	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAGTTGTCTAAAGAAAT	-124534293	True	NA	65	True	AATAAA	-10	NA	124539076	124488512	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_124488697_124493832_124493960_124495471_124495543_124504270_124504348_124508473_124508515_124508602_124508689_124515745_124515789_124515886_124516031_124518817_124518882_124539024
transcript_191270.known	chr8	+	3278	3	FSM	ENSG00000180938.6	ENST00000319286.6	3278	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	2.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATTGGAGAATTTGGGGG	124973102	True	NA	9	True	AATAAA	-20	NA	124973294	124979389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_124973417_124975605_124975720_124976347
transcript_191273.known	chr8	+	2962	11	FSM	ENSG00000104549.12	ENST00000265896.10	2962	11	0	0	0	0	multi-exon	FALSE	canonical	3	913	junction_1	46.8453839775063	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCGTGTCTTTTTGTTTC	124981932	True	NA	12	True	AATAAA	-13	NA	124998504	125022283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_124999695_125003175_125003429_125005524_125005706_125007390_125007488_125008970_125009085_125009171_125009344_125011536_125011633_125018058_125018202_125018630_125018728_125020783_125020872_125021752
transcript_191289.known	chr8	+	1879	11	FSM	ENSG00000104549.12	ENST00000523430.5	1879	11	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_1	300.330634468081	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTCGTGTCTTTTTGTT	124981924	True	NA	10	True	AATAAA	-11	NA	124998496	125022281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_124998606_125003175_125003429_125005524_125005706_125007390_125007488_125008970_125009085_125009171_125009344_125011536_125011633_125018058_125018202_125018630_125018728_125020783_125020872_125021752
transcript_191292.known	chr8	+	1188	8	FSM	ENSG00000156831.8	ENST00000287437.8	1188	8	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	31.16185527997	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCCTCCCTGCATGCCTC	125089906	True	NA	5	True	AATAAA	-17	NA	125091859	125367120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_125091959_125102050_125102147_125102316_125102488_125151170_125151278_125182102_125182257_125357218_125357320_125357711_125357819_125366767
transcript_191294.known	chr8	+	1037	7	FSM	ENSG00000156831.8	ENST00000522563.5	1037	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	39.2031744746377	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAGTGTTCTATAATG	125089916	True	NA	-40	True	AAAACA	-42	NA	125091869	125367075	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_125091959_125102316_125102488_125151170_125151278_125182102_125182257_125357218_125357320_125357711_125357819_125366767
transcript_191298.known	chr8	+	1183	5	FSM	ENSG00000156831.8	ENST00000520866.5	1183	5	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	33.9521722427299	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTTTTAGTGGACATAA	125089890	True	NA	NA	False	AATAAA	-12	NA	125091843	125182796	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_125091959_125102050_125102147_125102316_125102488_125151170_125151278_125182102
transcript_191305.known	chr8	+	592	4	FSM	ENSG00000156831.8	ENST00000523824.5	592	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	62.4944441975089	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTCCTTATCCTTAATG	125089916	True	NA	NA	False	NA	NA	NA	125091869	125151369	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_125091959_125102013_125102147_125102316_125102488_125151170
transcript_191314.known	chr8	-	4139	29	FSM	ENSG00000164961.16	ENST00000318410.12	4139	29	0	0	0	0	multi-exon	FALSE	canonical	2	179	junction_22	41.5632509138856	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGTCTCGCTTATGATTCA	-125087666	True	NA	-1	True	AGTAAA	-22	NA	125091792	125024259	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_125024674_125028619_125028708_125032240_125032395_125037236_125037334_125038829_125038960_125039794_125039899_125043824_125043905_125043991_125044095_125044535_125044699_125047206_125047332_125049005_125049186_125050563_125050666_125055590_125055672_125056676_125056818_125057555_125057667_125059221_125059298_125059375_125059543_125061081_125061195_125063521_125063652_125067591_125067720_125073152_125073325_125074997_125075112_125076347_125076501_125078737_125078931_125081660_125081762_125082382_125082468_125083112_125083259_125083712_125084023_125091614
transcript_191316.nic	chr8	-	3817	28	NIC	ENSG00000164961.16	novel	4139	29	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	2	34	junction_27	65.859579599066	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAAAGTCGTCTCGCTTA	-125087661	True	NA	-8	True	AGTAAA	-15	NA	125091787	125024266	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_125024674_125028619_125028708_125032240_125032395_125037236_125037334_125038829_125038960_125039794_125039899_125043824_125043905_125043991_125044095_125044535_125044699_125047206_125047332_125049005_125049186_125050563_125050666_125055590_125055672_125056676_125056818_125057555_125057667_125059221_125059298_125059375_125059543_125061081_125061195_125063521_125063652_125067591_125067720_125073152_125073325_125074997_125075112_125076347_125076501_125078737_125078931_125081660_125081762_125082382_125082468_125083112_125083259_125091614
transcript_191318.nic	chr8	-	4185	27	ISM	ENSG00000164961.16	ENST00000318410.12	4139	29	5	7428	3	-7421	5prime_fragment	FALSE	canonical	2	179	junction_20	39.4190992364791	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGATGCTGGGTCCTGTGC	-125087661	True	NA	-4	True	GATAAA	-20	NA	125091787	125031687	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_125032395_125037236_125037334_125038829_125038960_125039794_125039899_125043824_125043905_125043991_125044095_125044535_125044699_125047206_125047332_125049005_125049186_125050563_125050666_125055590_125055672_125056676_125056818_125057555_125057667_125059221_125059298_125059375_125059543_125061081_125061195_125063521_125063652_125067591_125067720_125073152_125073325_125074997_125075112_125076347_125076501_125078737_125078931_125081660_125081762_125082382_125082468_125083112_125083259_125083712_125084023_125091614
transcript_191325.known	chr8	+	3596	3	FSM	ENSG00000173334.4	ENST00000311922.4	3596	3	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	19	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGGTGAATTTCTTT	125429161	True	NA	15	True	AATAAA	-15	NA	125430357	125438403	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_125431263_125433316_125433610_125436005
transcript_191326.nic	chr8	+	3811	3	NIC	ENSG00000173334.4	novel	3596	3	NA	NA	-56	0	combination_of_known_junctions	FALSE	canonical	2	20	junction_2	61	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGGTGAATTTCTTT	125430243	True	NA	15	True	AATAAA	-15	NA	125430301	125438403	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_125431263_125433316_125433769_125436005
transcript_191328.known	chr8	+	498	3	FSM	ENSG00000253438.5	ENST00000517773.5	498	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGTTATGAAATTGGG	126557775	True	NA	NA	False	NA	NA	NA	126557885	126617741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_126557932_126589191_126589291_126617388
transcript_19133.known	chr1	+	3662	13	FSM	ENSG00000143476.18	ENST00000475419.5	3662	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	139.379652388718	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGATTGATAAA	212029265	False	NA	NA	False	NA	NA	NA	212035845	212104594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_212035943_212044659_212044759_212047150_212047213_212047296_212047418_212062883_212062950_212064916_212065030_212066811_212066886_212068598_212068704_212072100_212072214_212078172_212078263_212080614_212080751_212100251_212101085_212102841
transcript_191330.nnic	chr8	-	2424	2	FSM	ENSG00000168672.4	ENST00000517458.1	844	2	-1306	-274	6	-98	multi-exon	FALSE	canonical	3	67	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTTCCTCTTCACTATG	-126557691	False	232	-4	True	AATAAA	-21	NA	126557725	126552540	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_126553504_126556264
transcript_191334.nic	chr8	-	2694	3	NIC	ENSG00000168672.4	novel	5488	2	NA	NA	-61	-94	intron_retention	FALSE	canonical	3	67	junction_1	43	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTCTTCACTATGTCTT	NA	False	NA	0	True	AATAAA	-25	NA	126558539	126552536	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_126553504_126556264_126557486_126558033
transcript_191335.nnic	chr8	-	5336	3	NNC	ENSG00000168672.4	novel	5488	2	NA	NA	0	-98	intron_retention	TRUE	non_canonical	0	0	junction_1	76.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTTCCTCTTCACTATG	-126552092	True	NA	-4	True	AATAAA	-21	NA	126558478	126552540	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_-_126557180_126557233_126557486_126558033
transcript_191336.nic	chr8	-	2355	3	NIC	ENSG00000168672.4	novel	5488	2	NA	NA	-61	25	intron_retention	FALSE	canonical	3	67	junction_1	43	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATCGAATGGATTTGTTT	NA	False	NA	-12	True	AATAAA	-18	NA	126558539	126552875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_126553504_126556264_126557486_126558033
transcript_191337.known	chr8	-	5488	2	FSM	ENSG00000168672.4	ENST00000304916.4	5488	2	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGATTTTTTTCCACTTGA	-126552092	True	NA	-6	True	AATAAA	-18	NA	126558478	126552442	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_126557486_126558033
transcript_191344.known	chr8	+	3721	3	FSM	ENSG00000136997.21	ENST00000621592.8	3721	3	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_1	114	412	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGACTCCTAGAATAATC	127732692	True	NA	NA	False	AATAAA	-17	NA	127736230	127742951	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_127736624_127738247_127739020_127740395
transcript_191358.known	chr8	+	1581	8	FSM	ENSG00000249859.13	ENST00000657289.1	1581	8	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_6	44.7113189339828	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	127792572	True	NA	38	True	ATTAAA	-18	NA	127794532	128101256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_127794735_127890588_127890999_127939507_127939677_127989161_127989292_128009589_128009719_128010317_128010445_128096517_128096655_128100979
transcript_191363.known	chr8	+	1410	7	FSM	ENSG00000249859.13	ENST00000665737.1	1410	7	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_5	24.7571538482651	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCGTGGTCTTTCTTTA	127792598	True	NA	36	True	ATTAAA	-16	NA	127794558	128101254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_127794735_127890588_127890999_127939507_127939677_127989161_127989292_128070159_128070273_128096517_128096655_128100979
transcript_191369.known	chr8	+	1275	6	FSM	ENSG00000249859.13	ENST00000653522.1	1275	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	32.6398529408452	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	127792566	True	NA	38	True	ATTAAA	-18	NA	127794526	128101256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_127794735_127890588_127890999_127989161_127989292_128070159_128070273_128096517_128096655_128100979
transcript_191370.known	chr8	+	1353	6	FSM	ENSG00000249859.13	ENST00000657211.1	1353	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	46.9254728266003	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	127792577	True	NA	38	True	ATTAAA	-18	NA	127794537	128101256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_127794735_127890588_127890999_127989161_127989292_128070159_128070362_128096517_128096655_128100979
transcript_191371.nic	chr8	+	1550	6	NIC	ENSG00000249859.13	novel	1410	7	NA	NA	-519	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	41.6797312851223	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATGCCGTGGTCTTTCTT	127793774	True	NA	34	True	ATTAAA	-14	NA	127794006	128101252	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_127794735_127939507_127939677_127989161_127989292_128070159_128070273_128096517_128096655_128100979
transcript_191375.known	chr8	+	1152	5	FSM	ENSG00000249859.13	ENST00000662766.1	1152	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	43.8826560271823	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	127792576	True	NA	38	True	ATTAAA	-18	NA	127794536	128101256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_127794735_127890588_127890999_127989161_127989292_128096517_128096655_128100979
transcript_191379.nic	chr8	+	1986	4	ISM	ENSG00000249859.13	ENST00000665721.1	1162	5	-168	4935	1	0	5prime_fragment	FALSE	canonical	3	83	junction_2	15.084944665313	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTGACCGAGGGTGAAAC	127792571	True	NA	-22	True	NA	NA	NA	127794531	127990365	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_127794735_127890588_127890999_127939507_127939677_127989161
transcript_191381.nic	chr8	+	3770	4	ISM	ENSG00000249859.13	ENST00000665721.1	1162	5	-219	3202	-45	1733	5prime_fragment	FALSE	canonical	3	83	junction_2	15.084944665313	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGCCAGGCACAGTGG	127794454	False	NA	NA	False	AAAAAG	-9	NA	127794480	127992098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_127794735_127890588_127890999_127939507_127939677_127989161
transcript_191384.known	chr8	+	897	4	FSM	ENSG00000249859.13	ENST00000667204.1	897	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	2.94392028877595	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACGTTATATTTCTATCT	127792639	True	NA	NA	False	AATAAA	-22	NA	127794599	127932701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_127794735_127795893_127796009_127890588_127890999_127932464
transcript_191386.known	chr8	+	1990	4	FSM	ENSG00000249859.13	ENST00000656693.1	1990	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	29.227080289044	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTGACCGAGGGTGAAAC	127795455	True	NA	-22	True	NA	NA	NA	127795801	127990365	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_127796009_127890588_127890999_127939507_127939677_127989161
transcript_191387.known	chr8	+	861	3	FSM	ENSG00000249859.13	ENST00000664214.1	861	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	48	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATTTCTATCTTATAAT	127792566	True	NA	NA	False	AATAAA	-28	NA	127794526	127932707	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_127794735_127890588_127890999_127932464
transcript_191389.nic	chr8	+	3589	3	ISM	ENSG00000249859.13	ENST00000667539.1	1041	5	-62	4572	-33	1733	5prime_fragment	FALSE	canonical	3	49	junction_2	33	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGCCAGGCACAGTGG	127792532	True	NA	NA	False	AAAAAG	-9	NA	127794492	127992098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_127794735_127890588_127890999_127989161
transcript_1914.known	chr1	-	4795	5	FSM	ENSG00000116237.16	ENST00000343813.10	4795	5	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_3	38.2034029897861	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGTGTGATTGTCTGGG	-6226712	True	NA	-4	True	AATAAA	-22	NA	6235964	6221192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6225263_6231901_6232120_6233473_6233644_6234885_6234975_6235716
transcript_191403.nic	chr8	-	2072	14	NIC	ENSG00000153310.20	novel	2196	15	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_10	351.913114613091	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAT	-129926750	True	NA	-5	True	AATAAA	-22	NA	129939813	129841469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129880375_129880459_129903311_129903351_129904498_129904586_129939607
transcript_191409.nic	chr8	-	2171	14	NIC	ENSG00000153310.20	novel	2024	15	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_12	328.83583429602	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAT	-130016664	True	NA	-5	True	AATAAA	-22	NA	130016704	129841469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129903311_129903351_129904498_129904586_129970942_129970996_130016369
transcript_191410.known	chr8	-	1902	14	FSM	ENSG00000153310.20	ENST00000519110.5	1902	14	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_13	344.202207667693	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAT	-130016658	False	NA	-5	True	AATAAA	-22	NA	130016672	129841469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129903311_129903351_129904498_129904586_129970942_129970996_130016606
transcript_191419.known	chr8	-	2021	13	FSM	ENSG00000153310.20	ENST00000519540.5	2021	13	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_12	234.86107004402	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAATCAGCTTTCATT	NA	False	NA	-32	True	NA	NA	NA	129939872	129841496	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129903311_129903351_129904498_129904586_129939607
transcript_191422.known	chr8	-	1817	13	FSM	ENSG00000153310.20	ENST00000517654.5	1817	13	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_11	325.834910482117	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTTTCTAAGTGTGG	-130015281	True	NA	-19	True	AATAAA	-8	NA	130016451	129841483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129903311_129903351_129970942_129970996_130016369
transcript_191430.known	chr8	-	3798	12	FSM	ENSG00000153310.20	ENST00000519824.6	3798	12	0	0	0	0	multi-exon	FALSE	canonical	3	397	junction_11	220.800609353573	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCACTCATTTGTTGACA	-129939814	False	NA	-5	True	AATAAA	-18	NA	129939832	129839592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129903311_129903351_129939607
transcript_191434.nic	chr8	-	2048	12	NIC	ENSG00000153310.20	novel	2196	15	NA	NA	-83	0	combination_of_known_junctions	FALSE	canonical	3	371	junction_9	256.259263085952	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAT	NA	False	NA	-5	True	AATAAA	-22	NA	129939955	129841469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129903311_129903351_129904498_129904586_129939607
transcript_191440.nic	chr8	-	1901	11	NIC	ENSG00000153310.20	novel	2196	15	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	371	junction_9	242.940239565207	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAT	NA	False	NA	-5	True	AATAAA	-22	NA	129939895	129841469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129903311_129903351_129939607
transcript_191445.known	chr8	-	1647	10	FSM	ENSG00000153310.20	ENST00000522250.5	1647	10	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_9	307.081281715846	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTTTCTAAGTGTGG	-129926631	True	NA	-19	True	AATAAA	-8	NA	129939694	129841483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129939607
transcript_191449.known	chr8	-	507	2	FSM	ENSG00000153310.20	ENST00000518285.1	507	2	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCTCACACCTGTAATCC	-130016542	False	NA	NA	False	TTTAAA	-23	NA	130016556	129970675	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_129970996_130016369
transcript_191458.nic	chr8	-	2801	7	ISM	ENSG00000155897.10	ENST00000286355.10	4421	18	-7	123164	-7	307	5prime_fragment	FALSE	canonical	3	16	junction_6	7.16472842006823	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACTCATGTTGGAAAAAAT	-131040434	True	NA	NA	False	NA	NA	NA	131040916	130903464	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_130904043_130909707_130909867_130937072_130937201_130943350_130943463_130951867_130951999_130990392_130990543_131039373
transcript_191460.known	chr8	+	884	5	FSM	ENSG00000253507.6	ENST00000524275.5	884	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	1242.22391298831	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCTTCATTGTGCTGGA	131306906	True	NA	NA	False	NA	NA	NA	131308544	131317632	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_131308672_131310552_131310713_131312555_131312730_131315759_131315884_131317333
transcript_191461.nnic	chr8	+	801	4	NNC	ENSG00000253507.6	novel	1158	5	NA	NA	-58	-1695	at_least_one_novel_splicesite	FALSE	canonical	3	565	junction_1	1082.06726018097	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	16	True	AATAAA	-22	NA	131308486	131315811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_131308672_131310552_131310713_131312555_131312749_131315548
transcript_191463.nnic	chr8	+	1089	4	NIC	ENSG00000253507.6	novel	1158	5	NA	NA	-58	-3	combination_of_known_splicesites	FALSE	canonical	3	565	junction_1	1090.04617639193	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATTTATTTGCCTGTTT	NA	False	NA	24	True	AATAAA	-17	NA	131308486	131317884	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_131308672_131310552_131310713_131312555_131312749_131317333
transcript_191468.known	chr8	+	731	4	FSM	ENSG00000253507.6	ENST00000519005.1	731	4	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_2	1374.85861899405	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGGAACTGAGGACAACAA	131302356	True	NA	NA	False	NA	NA	NA	131310471	131317506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_131310713_131312555_131312749_131315759_131315884_131317333
transcript_191474.nnic	chr8	+	722	3	NNC	ENSG00000253507.6	novel	731	4	NA	NA	-25	-1695	at_least_one_novel_splicesite	FALSE	canonical	3	1149	junction_2	973.5	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	131302331	True	NA	16	True	AATAAA	-22	NA	131310446	131315811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_131310713_131312555_131312749_131315548
transcript_191477.nnic	chr8	+	1010	3	NIC	ENSG00000253507.6	novel	731	4	NA	NA	-25	-3	combination_of_known_splicesites	FALSE	canonical	3	1094	junction_2	1001	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATTTATTTGCCTGTTT	131302331	True	NA	24	True	AATAAA	-17	NA	131310446	131317884	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_131310713_131312555_131312749_131317333
transcript_19148.known	chr1	-	483	1	FSM	ENSG00000220749.4	ENST00000401418.2	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1429	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGGTGTTAAAAAAAAAAAA	-212051489	False	NA	NA	False	NA	NA	NA	212052006	212051523	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_212051500_212052000
transcript_191480.nnic	chr8	+	846	2	NIC	ENSG00000253507.6	novel	731	4	NA	NA	-54	-3	combination_of_known_splicesites	FALSE	canonical	3	80	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATTTATTTGCCTGTTT	131310394	True	NA	24	True	AATAAA	-17	NA	131310417	131317884	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_131310713_131317333
transcript_191485.known	chr8	+	5433	23	FSM	ENSG00000132294.15	ENST00000254624.10	5433	23	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_4	29.9367446073542	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTGCTTCTTTTGAGCC	131899038	True	NA	71	True	ATTAAA	-29	NA	131904092	132013642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_131904323_131940498_131940576_131944744_131944873_131946482_131946634_131949968_131950091_131953817_131953968_131955767_131955906_131959584_131959664_131968294_131968431_131970475_131970644_131976026_131976142_131977040_131977093_131978846_131979020_131979345_131979422_131984138_131984301_131984928_131985061_131986193_131986262_131987574_131987703_131996405_131996498_132001758_132001808_132002602_132002707_132003235_132003286_132010789
transcript_191493.nic	chr8	+	1813	14	ISM	ENSG00000132294.15	ENST00000254624.10	5433	23	-50	34253	-50	-21567	5prime_fragment	TRUE	canonical	3	135	junction_4	25.1537285341875	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGCAGACAAGACACAAGT	NA	False	NA	-18	True	GATAAA	-12	NA	131904042	131979389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_131904323_131940498_131940576_131944744_131944873_131946482_131946634_131949968_131950091_131953817_131953968_131955767_131955906_131959584_131959664_131968294_131968431_131970475_131970644_131976026_131976142_131977040_131977093_131978846_131979020_131979345
transcript_19150.known	chr1	+	3245	13	FSM	ENSG00000066027.12	ENST00000261461.7	3245	13	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_4	19.3482342002227	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCCTTATGTCATCTTT	212283511	True	NA	9	True	AATAAA	-14	NA	212285409	212361853	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_212286292_212329134_212329332_212333496_212333599_212342187_212342281_212345802_212345934_212347346_212347407_212348388_212348498_212349188_212349243_212356625_212356677_212356949_212357070_212357156_212357285_212358685_212358788_212360637
transcript_191517.nnic	chr8	-	2636	18	NIC	ENSG00000258417.3	novel	2413	18	NA	NA	-45	22	combination_of_known_splicesites	FALSE	canonical	2	6	junction_13	47.9731758958726	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTGATTGTTTTGCTTT	-132085686	False	NA	-3	True	AATAAA	-15	NA	132085700	132024215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_132024777_132029072_132029180_132031880_132032053_132033038_132033165_132034780_132034835_132036370_132036419_132037437_132037489_132038789_132038832_132038994_132039124_132041043_132041157_132041524_132041700_132044432_132044490_132045817_132045884_132076054_132076130_132076474_132076544_132077725_132077972_132079717_132079967_132085404
transcript_191529.nnic	chr8	-	4071	8	NIC	ENSG00000132297.13	novel	4188	17	NA	NA	-4596	340	combination_of_known_splicesites	FALSE	canonical	3	57	junction_7	32.7974613253489	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGAACAGACTTTATCCT	-132085686	False	NA	-23	True	ATTAAA	-21	NA	132085700	132061139	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_132064039_132065885_132065969_132071339_132071494_132076054_132076130_132076474_132076544_132077725_132077972_132079717_132079967_132085404
transcript_191533.nnic	chr8	-	3725	8	NIC	ENSG00000132297.13	novel	4188	17	NA	NA	-4596	-6	combination_of_known_splicesites	FALSE	canonical	3	57	junction_7	32.7974613253489	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAAGGTGCAGGCACATT	-132085686	False	NA	-17	True	ATTAAA	-17	NA	132085700	132061485	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_132064039_132065885_132065969_132071339_132071494_132076054_132076130_132076474_132076544_132077725_132077972_132079717_132079967_132085404
transcript_191538.nnic	chr8	-	3917	7	NIC	ENSG00000132297.13	novel	4188	17	NA	NA	-4596	340	combination_of_known_splicesites	FALSE	canonical	3	43	junction_2	41.1447309978919	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGAACAGACTTTATCCT	-132085686	False	NA	-23	True	ATTAAA	-21	NA	132085700	132061139	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_132064039_132065885_132065969_132076054_132076130_132076474_132076544_132077725_132077972_132079717_132079967_132085404
transcript_191539.nnic	chr8	-	3571	7	NIC	ENSG00000132297.13	novel	4188	17	NA	NA	-4596	-6	combination_of_known_splicesites	FALSE	canonical	3	43	junction_2	41.1447309978919	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAAGGTGCAGGCACATT	-132085686	False	NA	-17	True	ATTAAA	-17	NA	132085700	132061485	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_132064039_132065885_132065969_132076054_132076130_132076474_132076544_132077725_132077972_132079717_132079967_132085404
transcript_191556.nic	chr8	+	2018	13	NIC	ENSG00000129292.21	novel	6233	21	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_1	27.0056578434141	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTACACTGAGATGATT	132769520	True	NA	NA	False	AAAAAG	-23	NA	132775330	132825371	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_132775646_132777791_132777912_132794409_132794582_132794732_132794818_132798771_132798861_132803818_132804033_132804614_132804741_132811045_132811129_132814636_132814890_132816887_132817077_132817338_132817546_132824003_132824061_132825263
transcript_191557.nic	chr8	+	2014	13	ISM	ENSG00000129292.21	ENST00000220847.8	3297	20	-27	20552	-27	0	5prime_fragment	FALSE	canonical	3	109	junction_10	21.8751190472951	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTACACTGAGATGATT	132769520	True	NA	NA	False	AAAAAG	-23	NA	132775330	132825371	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_132775646_132777795_132777912_132794409_132794582_132794732_132794818_132798771_132798861_132803818_132804033_132804614_132804741_132811045_132811129_132814636_132814890_132816887_132817077_132817338_132817546_132824003_132824061_132825263
transcript_191559.nic	chr8	+	1907	12	NIC	ENSG00000129292.21	novel	2226	14	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_1	27.482225660829	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGGTATGAACAGAAAGTAA	132769520	True	NA	NA	False	AAAAAG	-31	NA	132775330	132824057	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_132775646_132777791_132777912_132794409_132794582_132794732_132794818_132798771_132798861_132803818_132804033_132804614_132804741_132811045_132811129_132814636_132814890_132816887_132817077_132817338_132817546_132824003
transcript_19156.nnic	chr1	+	3094	12	NIC	ENSG00000066027.12	novel	3245	13	NA	NA	-46	0	combination_of_known_splicesites	TRUE	canonical	3	26	junction_1	51.8116423305779	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCCTTATGTCATCTTT	212283465	True	NA	9	True	AATAAA	-14	NA	212285363	212361853	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_212286292_212333496_212333599_212342187_212342281_212345802_212345934_212347346_212347407_212348388_212348498_212349188_212349243_212356625_212356677_212356949_212357070_212357156_212357285_212358685_212358788_212360637
transcript_191562.nic	chr8	+	1903	12	ISM	ENSG00000129292.21	ENST00000220847.8	3297	20	-27	21866	-27	0	5prime_fragment	FALSE	canonical	3	109	junction_10	21.5337520961593	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGGTATGAACAGAAAGTAA	132769520	True	NA	NA	False	AAAAAG	-31	NA	132775330	132824057	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_132775646_132777795_132777912_132794409_132794582_132794732_132794818_132798771_132798861_132803818_132804033_132804614_132804741_132811045_132811129_132814636_132814890_132816887_132817077_132817338_132817546_132824003
transcript_191564.known	chr8	+	3237	11	FSM	ENSG00000129292.21	ENST00000361997.9	3237	11	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_6	40.6698905825919	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATAACTAAGAGTCTTAC	132769564	True	NA	NA	False	AATATA	-20	NA	132775374	132818970	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_132775646_132777791_132777912_132794409_132794582_132794732_132794818_132798771_132798861_132803818_132804033_132804611_132804741_132811045_132811129_132814636_132814890_132816887_132817077_132817338
transcript_191565.nic	chr8	+	1849	11	ISM	ENSG00000129292.21	ENST00000220847.8	3297	20	-27	28378	-27	-1425	5prime_fragment	FALSE	canonical	3	109	junction_10	21.7395952124229	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTAAAAGAAAAAAAATAAAG	132769520	True	NA	NA	False	NA	NA	NA	132775330	132817545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_132775646_132777795_132777912_132794409_132794582_132794732_132794818_132798771_132798861_132803818_132804033_132804614_132804741_132811045_132811129_132814636_132814890_132816887_132817077_132817338
transcript_191570.known	chr8	+	2311	8	FSM	ENSG00000129292.21	ENST00000337920.8	2311	8	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_6	19.3601737216021	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAATGTCAATCTTTGAT	132769597	True	NA	NA	False	AATAAA	-19	NA	132775407	132812316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_132775646_132777795_132777912_132794409_132794582_132794732_132794818_132798771_132798861_132803818_132804033_132804614_132804741_132811045
transcript_191578.known	chr8	-	822	2	FSM	ENSG00000155926.14	ENST00000517549.1	822	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATGCACACATTGTGTG	-133040251	False	NA	NA	False	NA	NA	NA	133040341	133038259	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_133038738_133039997
transcript_191580.known	chr8	-	3025	16	FSM	ENSG00000104419.17	ENST00000323851.13	3025	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	1.74610678049451	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCTTGTGTCTTTTTTCT	-133297220	True	NA	-4	True	AATAAA	-15	NA	133297252	133237174	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_133239120_133242022_133242075_133244354_133244391_133246615_133246664_133247874_133247927_133248714_133248772_133250439_133250544_133254538_133254596_133256776_133256864_133258365_133258427_133259167_133259231_133262046_133262168_133264546_133264653_133280231_133280268_133284248_133284330_133297133
transcript_191583.known	chr8	-	6715	10	FSM	ENSG00000008513.16	ENST00000522652.6	6715	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	2.69887951144247	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTGTGTTTGTTGCTTTT	-133571563	True	NA	-1	True	AATAAA	-21	NA	133571887	133454847	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_133459938_133461874_133461995_133463413_133463460_133464777_133464958_133465893_133466091_133475718_133476075_133476277_133476601_133499134_133499190_133545773_133545927_133571692
transcript_191585.known	chr8	-	6951	9	FSM	ENSG00000008513.16	ENST00000521180.5	6951	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	2.59506743650334	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTGGGTGTGTTTGTTG	-133571601	True	NA	-6	True	AATAAA	-16	NA	133571925	133454852	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_133459938_133461874_133461995_133463413_133463460_133464777_133464958_133465893_133466091_133475718_133476601_133499134_133499190_133545773_133545927_133571692
transcript_191591.known	chr8	-	4594	16	FSM	ENSG00000066827.16	ENST00000377838.8	4594	16	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_14	4.61109772421082	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGGTTCTTCAGGCGG	-134712696	True	NA	-3	True	AATAAA	-18	NA	134713031	134477787	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_134478722_134509618_134509750_134512474_134512602_134520882_134521002_134532833_134532973_134565332_134565422_134583831_134584006_134588245_134588396_134590267_134590356_134600435_134600669_134601476_134602934_134608728_134608880_134610469_134610656_134637460_134637713_134657560_134657738_134712844
transcript_191592.nic	chr8	-	4624	16	NIC	ENSG00000066827.16	novel	4421	16	NA	NA	-126	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	5.40370243444252	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGCTTTGGTTCTTCAG	NA	False	NA	-7	True	AATAAA	-14	NA	134713175	134477791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_134478702_134509708_134509750_134512474_134512602_134520882_134521002_134532833_134532973_134565332_134565422_134583831_134584006_134588245_134588396_134590267_134590356_134600435_134600669_134601476_134602934_134608728_134608880_134610469_134610656_134637460_134637713_134657560_134657738_134712844
transcript_191597.known	chr8	-	6899	23	FSM	ENSG00000167632.18	ENST00000438773.4	6899	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	13.8710859269701	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCGGACCTGTAGATGGTT	-140456421	True	NA	NA	False	AATAGA	-15	NA	140457744	139727724	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_139731229_139731978_139732203_139885878_139885970_139910146_139910301_139988725_139988837_140023936_140024080_140221458_140221584_140252776_140252930_140275657_140275822_140283888_140284022_140287607_140287735_140290992_140291079_140300468_140300615_140311247_140311375_140360049_140360194_140370963_140371181_140397619_140397746_140405576_140405699_140426614_140426642_140435111_140435241_140439051_140439198_140450789_140451384_140457638
transcript_191598.known	chr8	-	7092	23	FSM	ENSG00000167632.18	ENST00000648948.2	7092	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	15.5637850460188	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCGGACCTGTAGATGGTT	-140458568	False	NA	NA	False	AATAGA	-15	NA	140458579	139727724	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_139731229_139731978_139732203_139885878_139885970_139910146_139910301_139988725_139988837_140023936_140024080_140221458_140221584_140252776_140252930_140275657_140275822_140283888_140284022_140287607_140287735_140290992_140291079_140300468_140300615_140311247_140311375_140360049_140360194_140370963_140371181_140397619_140397746_140405576_140405699_140426614_140426642_140435111_140435241_140439051_140439198_140450789_140451384_140458280
transcript_191606.nic	chr8	-	2779	16	ISM	ENSG00000167632.18	ENST00000438773.4	6899	23	-26	524846	-26	0	5prime_fragment	FALSE	canonical	3	11	junction_11	12.6936554580975	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATTCTCACTCTTTATT	-140457759	False	NA	NA	False	AATAAA	-21	NA	140457770	140252570	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_140252930_140275657_140275822_140283888_140284022_140287607_140287735_140290992_140291079_140300468_140300615_140311247_140311375_140360049_140360194_140370963_140371181_140397619_140397746_140405576_140405699_140426614_140426642_140435111_140435241_140439051_140439198_140450789_140451384_140457638
transcript_191609.known	chr8	+	2481	3	FSM	ENSG00000104472.10	ENST00000220913.10	2481	3	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_2	7.5	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCAGTTTGGTGGCCTGTC	140507515	True	NA	8	True	ATTAAA	-23	NA	140511321	140517154	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_140511647_140514368_140514496_140515125
transcript_191610.known	chr8	+	811	3	FSM	ENSG00000104472.10	ENST00000519618.1	811	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	120	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATTAAAGATCTGTACATA	140511832	True	NA	NA	False	AATATA	-6	NA	140511981	140515765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_140512026_140514368_140514496_140515125
transcript_191611.known	chr8	+	1678	2	FSM	ENSG00000104472.10	ENST00000519533.1	1678	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATGAAAAAGTTTATAA	140507504	True	NA	NA	False	NA	NA	NA	140511310	140516467	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_140511647_140515125
transcript_191612.known	chr8	-	14595	19	FSM	ENSG00000123908.12	ENST00000220592.10	14595	19	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_10	13.3575012448501	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCCTCTTCCAAAAATCT	-140627562	True	NA	-22	True	AATAAA	-17	NA	140635633	140520155	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_140532153_140532415_140532616_140535467_140535570_140539319_140539455_140541163_140541359_140544212_140544304_140547467_140547628_140549113_140549299_140551302_140551437_140555895_140556019_140556166_140556287_140557088_140557237_140558484_140558573_140559394_140559530_140560373_140560511_140562452_140562635_140572811_140572933_140585118_140585312_140635484
transcript_191621.known	chr8	-	4388	33	FSM	ENSG00000169398.19	ENST00000519993.5	4388	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	200.557036775078	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTCTTGTTGTAATATC	-141001345	False	NA	-23	True	ATTAAA	-15	NA	141001379	140658404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_140659679_140664916_140664998_140668268_140668425_140669726_140669736_140674297_140674405_140675459_140675500_140686631_140686695_140700890_140701023_140702569_140702708_140706118_140706206_140717597_140717710_140735250_140735456_140739017_140739108_140743229_140743331_140744651_140744768_140746759_140746861_140752231_140752317_140761164_140761263_140762367_140762389_140764233_140764291_140769574_140769593_140789473_140789527_140793353_140793385_140800458_140800577_140803542_140803651_140818276_140818355_140818879_140819021_140830471_140830527_140846259_140846323_140846598_140846679_140864311_140864400_140890542_140890770_141001124
transcript_191630.nic	chr8	-	4570	33	NIC	ENSG00000169398.19	novel	4414	33	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	135.708888226785	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGTTGTAATATCCTT	-140993297	True	NA	-20	True	ATTAAA	-18	NA	141001341	140658401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_140659679_140664916_140664998_140668268_140668425_140669726_140669736_140674297_140674405_140675459_140675500_140686631_140686695_140700890_140701023_140702569_140702708_140706118_140706206_140717597_140717710_140735250_140735456_140739017_140739108_140743229_140743331_140744651_140744768_140746759_140746861_140752231_140752317_140761164_140761263_140764233_140764291_140789473_140789527_140793353_140793385_140800458_140800577_140803542_140803651_140818276_140818355_140818879_140819021_140830471_140830527_140846259_140846323_140846598_140846679_140864311_140864400_140879470_140879638_140890542_140890770_140925660_140925750_141001124
transcript_19164.known	chr1	-	2469	8	FSM	ENSG00000065600.13	ENST00000261455.9	2469	8	0	0	0	0	multi-exon	TRUE	canonical	3	101	junction_2	14.9734458837187	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCCCTGCCACTTTTCTG	-212412946	True	NA	NA	False	ATTAAA	-20	NA	212414886	212363927	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_212365377_212375192_212375301_212377561_212377707_212379894_212380038_212385273_212385426_212386890_212387101_212410424_212410522_212414721
transcript_191642.known	chr8	-	4955	32	FSM	ENSG00000169398.19	ENST00000522684.5	4955	32	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_31	86.1849039512993	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCATCTTTGGATCTGTG	-140993189	True	NA	NA	False	AATACA	-21	NA	141001233	140657899	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_140659679_140664916_140664998_140668268_140668425_140674297_140674405_140675459_140675500_140686631_140686695_140700890_140701023_140702569_140702708_140706118_140706206_140717597_140717710_140735250_140735456_140739017_140739108_140743229_140743331_140744651_140744768_140746759_140746861_140752231_140752317_140761164_140761263_140764233_140764291_140789473_140789527_140793353_140793385_140800458_140800577_140803542_140803651_140818276_140818355_140818879_140819021_140830471_140830527_140846259_140846323_140846598_140846679_140864311_140864400_140879470_140879638_140890542_140890770_140925660_140925750_141001124
transcript_191644.nic	chr8	-	4505	32	NIC	ENSG00000169398.19	novel	4405	32	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_30	117.340615215655	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGTTGTAATATCCTT	-140993272	True	NA	-20	True	ATTAAA	-18	NA	141001316	140658401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_140659679_140664916_140664998_140668268_140668425_140674297_140674405_140675459_140675500_140686631_140686695_140700890_140701023_140702569_140702708_140706118_140706206_140717597_140717710_140735250_140735456_140739017_140739108_140743229_140743331_140744651_140744768_140746759_140746861_140752231_140752317_140761164_140761263_140764233_140764291_140789473_140789527_140793353_140793385_140800458_140800577_140803542_140803651_140818276_140818355_140818879_140819021_140830471_140830527_140846259_140846323_140846598_140846679_140864311_140864400_140879470_140879638_140890542_140890770_140948665_140948724_141001124
transcript_191650.nic	chr8	-	4464	31	NIC	ENSG00000169398.19	novel	4405	32	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	250	junction_30	63.6715181397634	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGTTGTAATATCCTT	-140993289	True	NA	-20	True	ATTAAA	-18	NA	141001333	140658401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_140659679_140664916_140664998_140668268_140668425_140674297_140674405_140675459_140675500_140686631_140686695_140700890_140701023_140702569_140702708_140706118_140706206_140717597_140717710_140735250_140735456_140739017_140739108_140743229_140743331_140744651_140744768_140746759_140746861_140752231_140752317_140761164_140761263_140764233_140764291_140789473_140789527_140793353_140793385_140800458_140800577_140803542_140803651_140818276_140818355_140818879_140819021_140830471_140830527_140846259_140846323_140846598_140846679_140864311_140864400_140879470_140879638_140890542_140890770_141001124
transcript_191653.nic	chr8	-	4312	31	NIC	ENSG00000169398.19	novel	4955	32	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	90	junction_28	110.390740352421	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGTTGTAATATCCTT	-140993215	True	NA	-20	True	ATTAAA	-18	NA	141001259	140658401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_140659679_140664916_140664998_140668268_140668425_140674297_140674405_140675459_140675500_140686631_140686695_140700890_140701023_140702569_140702708_140706118_140706206_140717597_140717710_140735250_140735456_140739017_140739108_140743229_140743331_140744651_140744768_140746759_140746861_140752231_140752317_140761164_140761263_140764233_140764291_140789473_140789527_140793353_140793385_140800458_140800577_140803542_140803651_140818276_140818355_140818879_140819021_140830471_140830527_140846259_140846323_140846598_140846679_140864311_140864400_140890542_140890770_140925660_140925750_141001124
transcript_191685.known	chr8	-	488	5	FSM	ENSG00000169398.19	ENST00000523067.5	488	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	172.777855930672	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATACGGTAAGATGATAA	-141001133	False	NA	NA	False	NA	NA	NA	141001167	140846606	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_140846679_140864311_140864400_140890542_140890770_140948665_140948724_141001124
transcript_191688.nic	chr8	-	2249	4	ISM	ENSG00000169398.19	ENST00000395218.3	4415	31	23	219489	-5	1291	5prime_fragment	FALSE	canonical	3	187	junction_3	118.502695703047	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTAGTAGATTGTTGTT	-140993246	True	NA	0	True	AATAAA	-19	NA	141001290	140877870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_140879638_140890542_140890770_140925660_140925750_141001124
transcript_191689.known	chr8	-	602	4	FSM	ENSG00000169398.19	ENST00000520045.5	602	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	185.735175870258	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAGTGGAAGTAAGATAC	-140993241	True	NA	NA	False	NA	NA	NA	141001285	140879481	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_140879638_140890542_140890770_140948665_140948724_141001124
transcript_191695.known	chr8	-	475	4	FSM	ENSG00000169398.19	ENST00000524040.5	475	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	75.7671872690723	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCAGTATTATCAGGCAT	-140993222	True	NA	NA	False	ATTAAA	-42	NA	141001266	140890583	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_140890770_140925660_140925750_140948665_140948724_141001124
transcript_191696.known	chr8	-	863	3	FSM	ENSG00000169398.19	ENST00000519881.5	863	3	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_2	98	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGTGTGTATGTATA	-140993240	True	NA	-1	True	AATAAA	-17	NA	141001284	140879161	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_140879638_140890542_140890770_141001124
transcript_191699.known	chr8	-	4661	31	FSM	ENSG00000169398.19	ENST00000517887.5	4661	31	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_30	96.6831939894416	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGTTGTAATATCCTT	-140921200	True	NA	-20	True	ATTAAA	-18	NA	140921219	140658401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_140659679_140664916_140664998_140668268_140668425_140674297_140674405_140675459_140675500_140686631_140686695_140700890_140701023_140702569_140702708_140706118_140706206_140717597_140717710_140735250_140735456_140739017_140739108_140743229_140743331_140744651_140744768_140746759_140746861_140752231_140752317_140761164_140761263_140764233_140764291_140789473_140789527_140793353_140793385_140800458_140800577_140803542_140803651_140818276_140818355_140818879_140819021_140830471_140830527_140846259_140846323_140846598_140846679_140864311_140864400_140879470_140879638_140890542_140890770_140920813
transcript_19171.nnic	chr1	-	1712	6	NIC	ENSG00000065600.13	novel	2119	9	NA	NA	-31	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	55.9199427753641	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACGAGTGTGACAATATG	NA	False	NA	-14	True	AATAAA	-14	NA	212414932	212364477	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_212365377_212379894_212380038_212385273_212385426_212386890_212387101_212410424_212410522_212414721
transcript_191713.known	chr8	-	1564	2	FSM	ENSG00000204882.4	ENST00000377741.4	1564	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACAAAGATTATTTAGGTG	-141367244	False	NA	NA	False	AAAAAG	-14	NA	141367286	141356469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_141357948_141367200
transcript_191725.nnic	chr8	+	1903	6	NNC	ENSG00000184489.13	novel	2849	6	NA	NA	-34	0	intron_retention	FALSE	canonical	3	28	junction_2	79.9089481847934	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTGTGTGGAGTGGGC	141390530	True	NA	18	True	AATAAA	-13	NA	141391960	141431520	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_141392085_141421387_141422274_141425047_141425141_141426938_141427070_141427749_141427825_141430926
transcript_191727.known	chr8	+	2849	6	FSM	ENSG00000184489.13	ENST00000521578.6	2849	6	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	41.4805978741869	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTGTATTTTTTCAAT	141390590	True	NA	8	True	AGTAAA	-21	NA	141392020	141432454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_141392085_141421387_141422346_141425047_141425141_141426938_141427070_141427749_141427825_141430926
transcript_19173.known	chr1	+	875	4	FSM	ENSG00000117691.10	ENST00000473900.1	875	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	266.653749687159	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGAGAATTCTTCCCCA	212428156	True	NA	3	True	AATAAA	-15	NA	212432972	212446372	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_212433121_212442545_212442626_212444338_212444443_212445829
transcript_191736.nnic	chr8	+	2347	6	NNC	ENSG00000184489.13	novel	1899	5	NA	NA	-386	0	intron_retention	FALSE	canonical	3	24	junction_1	80.2854905945028	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTGTGTGGAGTGGGC	141417434	False	NA	18	True	AATAAA	-13	NA	141417522	141431520	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_141418019_141421387_141422346_141425047_141425141_141426938_141427070_141427749_141427825_141430926
transcript_191740.known	chr8	+	1866	5	FSM	ENSG00000184489.13	ENST00000520105.5	1866	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	89.9235786654424	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTGTGTGGAGTGGGC	141390564	True	NA	18	True	AATAAA	-13	NA	141391994	141431520	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_141392085_141421387_141422346_141425047_141425141_141426938_141427070_141430926
transcript_191747.known	chr8	+	1899	5	FSM	ENSG00000184489.13	ENST00000681443.1	1899	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	111.43383687193	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTGTGTGGAGTGGGC	141417820	False	NA	18	True	AATAAA	-13	NA	141417908	141431520	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_141418032_141421387_141422346_141425047_141425141_141426938_141427070_141430926
transcript_19176.known	chr1	+	845	3	FSM	ENSG00000117691.10	ENST00000479589.5	845	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	272	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGAGAATTCTTCCCCA	212428106	True	NA	3	True	AATAAA	-15	NA	212432922	212446372	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_212433121_212444338_212444443_212445829
transcript_191770.known	chr8	-	2110	11	FSM	ENSG00000171045.16	ENST00000519651.5	2110	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	19.2522725931252	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACTTGGTACTGTATGG	-142402122	True	NA	9	True	TATAAA	-37	NA	142403168	142270474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_142271692_142274780_142274864_142284412_142284486_142300485_142300648_142314383_142314441_142315002_142315090_142318543_142318635_142330900_142330971_142331753_142331832_142354636_142354764_142403103
transcript_19178.known	chr1	+	2031	5	FSM	ENSG00000162772.17	ENST00000613954.4	2031	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	4.81534007106456	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGTGTTGTGCTGGTT	212607797	True	NA	11	True	AATAAA	-21	NA	212608627	212620772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_212608931_212615017_212615023_212615061_212615262_212618126_212618235_212619357
transcript_191790.known	chr8	-	2950	3	FSM	ENSG00000198576.4	ENST00000356613.4	2950	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	6.5	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGTGTTCATGTTGTTT	-142614098	True	NA	-10	True	AATAAA	-14	NA	142614479	142611048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_142611858_142612107_142612253_142612483
transcript_191791.known	chr8	-	407	2	FSM	ENSG00000198576.4	ENST00000581404.1	407	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCGGCCAAATGAGCTCCT	-142612321	False	NA	NA	False	NA	NA	NA	142612702	142612064	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_142612253_142612483
transcript_191793.known	chr8	-	2823	4	FSM	ENSG00000234616.9	ENST00000615982.4	2823	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	3.39934634239519	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTCAGCCTCAGGTGTTA	-142667917	True	NA	NA	False	AATAAA	-18	NA	142669970	142657462	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_142658081_142658821_142658945_142664477_142666521_142669931
transcript_191797.known	chr8	-	2687	3	FSM	ENSG00000234616.9	ENST00000571961.7	2687	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	4	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAGAAAGCCTTCAGCC	-142667941	True	NA	NA	False	AATAAA	-20	NA	142669994	142658363	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_142658945_142664477_142666521_142669931
transcript_1918.known	chr1	-	508	4	FSM	ENSG00000116251.11	ENST00000465387.5	508	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3071.06597490549	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTTACTTCCAGATTAACCA	-6199502	False	NA	NA	False	NA	NA	NA	6199553	6186722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6186817_6192929_6193055_6197651_6197757_6199369
transcript_19180.known	chr1	+	1940	4	FSM	ENSG00000162772.17	ENST00000341491.9	1940	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	3.2659863237109	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGTTGTGCTGGTTTCT	212607930	True	NA	14	True	AATAAA	-24	NA	212608760	212620775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_212608931_212615017_212615262_212618126_212618235_212619357
transcript_191800.known	chr8	-	9097	2	FSM	ENSG00000234616.9	ENST00000612905.2	9097	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCCTCAGGTGTTACTT	-142667914	True	NA	NA	False	AATAAA	-21	NA	142669967	142657459	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_142666521_142669931
transcript_191803.known	chr8	+	2671	3	FSM	ENSG00000160886.13	ENST00000292430.10	2671	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCTGATTTCTTTGAGGC	NA	False	NA	NA	False	NA	NA	NA	142700110	142705127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_142700631_142701599_142701714_142703090
transcript_191804.nic	chr8	+	2133	3	NIC	ENSG00000130193.8	novel	2279	2	NA	NA	-13	0	intron_retention	FALSE	canonical	0	0	junction_2	22	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCGTGCTGGGGAGGGCCT	142726675	True	NA	14	True	ATTAAA	-14	NA	142727209	142736925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_142727860_142735325_142736496_142736612
transcript_191805.known	chr8	+	2239	2	FSM	ENSG00000130193.8	ENST00000336138.4	2239	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGCTGGGGAGGGCCTTG	142726688	True	NA	16	True	ATTAAA	-16	NA	142727222	142736927	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_142727860_142735325
transcript_191806.known	chr8	-	639	4	FSM	ENSG00000180155.20	ENST00000613110.4	639	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	3.55902608401044	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCCAGTACGACCTCTG	-142777289	False	NA	NA	False	NA	NA	NA	142777328	142775265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_142775364_142775592_142775695_142775905_142776122_142777105
transcript_191807.known	chr8	-	4537	4	FSM	ENSG00000180155.20	ENST00000621401.4	4537	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	6.54896090146283	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTTCTCTCCAGCCCCA	-142777771	False	NA	0	True	AATAAA	-20	NA	142777810	142771196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_142775364_142775592_142775695_142775905_142776122_142777758
transcript_19181.nnic	chr1	+	2378	4	NNC	ENSG00000162772.17	novel	1940	4	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_1	3.68178700572909	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGTTGTGCTGGTTTCT	212607833	True	NA	14	True	AATAAA	-24	NA	212608663	212620775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_212609272_212615017_212615262_212618126_212618235_212619357
transcript_191813.known	chr8	+	868	5	FSM	ENSG00000160932.11	ENST00000522024.1	868	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	563.292552764547	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCCTTGGTCCCAGGTC	143003178	True	NA	NA	False	NA	NA	NA	143018556	143021892	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143018587_143018832_143019120_143020887_143020992_143021313_143021434_143021565
transcript_191814.known	chr8	+	740	5	FSM	ENSG00000160932.11	ENST00000521003.5	740	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	560.567290786753	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCAGGTCAGGCCCACCC	143003150	True	NA	NA	False	NA	NA	NA	143018528	143021902	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143018587_143020261_143020378_143020882_143020992_143021313_143021434_143021565
transcript_191815.known	chr8	+	635	5	FSM	ENSG00000160932.11	ENST00000519611.5	635	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	509.556915368637	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCCCCGATCCCCCAGC	143003165	True	NA	NA	False	NA	NA	NA	143018543	143021800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143018587_143020261_143020378_143020887_143020992_143021313_143021434_143021548
transcript_191816.known	chr8	+	971	4	FSM	ENSG00000160932.11	ENST00000519546.5	971	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	490.072103538517	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGCACTTCAAGGGCAG	143003173	True	NA	NA	False	NA	NA	NA	143018551	143022255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143018587_143020882_143020992_143021313_143021434_143021548
transcript_191817.known	chr8	+	1079	4	FSM	ENSG00000160932.11	ENST00000521182.5	1079	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	450.271276257127	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTGCTCTGAGTGTGG	143003167	True	NA	31	True	AATAAA	-16	NA	143018545	143022409	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143018587_143020882_143020992_143021348_143021434_143021565
transcript_191818.known	chr8	+	857	4	FSM	ENSG00000160932.11	ENST00000522971.5	857	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	531.216423775554	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTTTGGGGAGGGAGGT	143003163	True	NA	NA	False	NA	NA	NA	143018541	143022182	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143018587_143020916_143020992_143021313_143021434_143021565
transcript_191819.known	chr8	-	1781	3	FSM	ENSG00000247317.4	ENST00000502167.2	1781	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATCCAAAGGTTAGCAACT	NA	False	NA	NA	False	GATAAA	-12	NA	143018397	143007752	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143009208_143012484_143012573_143018159
transcript_19182.known	chr1	+	1626	3	FSM	ENSG00000162772.17	ENST00000465155.5	1626	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	2	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCCCGGTGTGTCCCAGG	212607839	True	NA	NA	False	NA	NA	NA	212608669	212619247	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_212608931_212615017_212615262_212618126
transcript_191820.known	chr8	+	1300	4	FSM	ENSG00000261667.2	ENST00000562505.2	1300	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0.942809041582063	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCTCATTCCTTCCTTC	143080605	True	NA	3	True	AATAAA	-15	NA	143080629	143083486	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143080660_143081035_143081127_143081210_143081328_143082424
transcript_191821.known	chr8	-	942	4	FSM	ENSG00000176956.13	ENST00000342752.9	942	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	0.942809041582063	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCGGGTCTGAGCCTGGG	-143160305	False	NA	NA	False	AATAAA	-19	NA	143160321	143157915	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143158486_143158802_143158923_143159581_143159710_143160197
transcript_191822.known	chr8	+	1082	4	FSM	ENSG00000250571.7	ENST00000521682.5	1082	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	19.1891172861657	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTCCCATCCACTGGGT	143266510	True	NA	NA	False	NA	NA	NA	143267436	143275751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143267485_143269359_143269521_143274703_143274803_143274977
transcript_191823.known	chr8	+	1335	4	FSM	ENSG00000250571.7	ENST00000340042.2	1335	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	14.613540144522	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGAGCCGGCACCTGCCT	143266518	True	NA	18	True	AATAAA	-20	NA	143267444	143276931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143267485_143269359_143269521_143274703_143274803_143275896
transcript_191825.known	chr8	+	4786	3	FSM	ENSG00000181638.20	ENST00000330701.7	4786	3	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	9.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGTCTTCATTGAGCTC	143245930	True	NA	10	True	AGTAAA	-19	NA	143246938	143262705	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143247143_143249689_143251341_143259774
transcript_191826.nic	chr8	+	2546	3	NIC	ENSG00000181638.20	novel	3284	3	NA	NA	4	-2851	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	7	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCGCACATTCCTCAGTT	143245926	True	NA	NA	False	NA	NA	NA	143246934	143259854	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_143247750_143249689_143251341_143259774
transcript_191828.nic	chr8	+	2450	3	ISM	ENSG00000250571.7	ENST00000340042.2	1335	4	-24	3	-12	-3	intron_retention	FALSE	canonical	3	50	junction_1	12	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGGGAGCCGGCACCTG	143266494	True	NA	15	True	AATAAA	-17	NA	143267420	143276928	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_143267485_143269359_143269521_143274703
transcript_19183.known	chr1	-	836	3	FSM	ENSG00000123685.9	ENST00000243440.2	836	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	2	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTCGTCTTCTGTCTTCT	-212699590	False	NA	-1	True	AATACA	-16	NA	212699840	212686416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_212686980_212696960_212697066_212699672
transcript_191831.known	chr8	+	1297	3	FSM	ENSG00000250571.7	ENST00000523522.5	1297	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	17.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGAGCCGGCACCTGCCT	143268431	False	NA	18	True	AATAAA	-20	NA	143269357	143276931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143269521_143274703_143274803_143275896
transcript_191832.known	chr8	-	379	2	FSM	ENSG00000253716.7	ENST00000518073.2	1048	2	2	667	1	0	multi-exon	FALSE	canonical	3	45	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAAGGTTGGAGAATCAA	-143280734	True	NA	-14	True	ATTAAA	-16	NA	143281690	143280827	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143280998_143281481
transcript_191833.known	chr8	+	576	4	FSM	ENSG00000185730.8	ENST00000523891.1	576	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	47.8493004709113	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGACAGAGTGGCCTCGAG	143289627	False	NA	NA	False	NA	NA	NA	143289675	143295964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143289819_143290744_143290859_143292971_143293066_143295739
transcript_191835.known	chr8	+	605	4	FSM	ENSG00000185730.8	ENST00000520333.1	605	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	37.2767428238514	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCCTGCCGCAGAGGCAG	143289019	True	NA	NA	False	NA	NA	NA	143291421	143295812	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143291768_143292971_143293066_143295378_143295471_143295739
transcript_191844.known	chr8	+	4658	3	FSM	ENSG00000185730.8	ENST00000330143.8	4658	3	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	9	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAAAAATCAGAAAC	143289014	True	NA	NA	False	NA	NA	NA	143291416	143299952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143291768_143292971_143293066_143295739
transcript_19185.known	chr1	-	790	7	FSM	ENSG00000117697.15	ENST00000626725.1	790	7	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_2	191.856717370021	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTGAGAACTTTATAACAC	-212785387	True	NA	NA	False	NA	NA	NA	212791776	212738561	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_212738687_212739533_212739602_212766188_212766274_212782371_212782427_212784362_212784494_212787558_212787638_212791529
transcript_191850.known	chr8	+	545	3	FSM	ENSG00000185730.8	ENST00000518432.5	545	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	39.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAACGCAGGCCCCGGCGC	143289014	True	NA	NA	False	NA	NA	NA	143291416	143295996	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143291611_143292971_143293066_143295739
transcript_191860.known	chr8	-	1982	15	FSM	ENSG00000184428.13	ENST00000523676.5	1982	15	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_13	106.135766923352	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGAATTTTGTACAATAAA	-143327982	True	NA	-4	True	ATTAAA	-9	NA	143334795	143309376	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143309544_143310067_143310218_143315726_143315822_143315998_143316127_143317722_143317838_143318017_143318087_143321200_143321387_143323998_143324143_143324484_143324630_143325345_143325534_143326221_143326345_143329349_143329472_143331223_143331340_143334107_143334286_143334739
transcript_191861.known	chr8	-	1942	14	FSM	ENSG00000184428.13	ENST00000329245.9	1942	14	0	0	0	0	multi-exon	TRUE	canonical	3	267	junction_13	26.3512909084997	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCCAGGCCGGCCGGGCA	-143328067	True	NA	-3	True	AATAAA	-34	NA	143334880	143309323	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143309544_143310067_143310218_143315726_143315822_143315998_143316127_143317722_143317838_143318017_143318087_143321200_143321387_143323998_143324143_143324484_143324630_143325345_143325534_143326221_143326345_143329349_143329472_143331223_143331340_143334739
transcript_191863.known	chr8	-	1918	1	FSM	ENSG00000254389.3	ENST00000518049.1	1918	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGAGATGGAGTCTTG	-143368346	True	NA	-7	True	NA	NA	NA	143368548	143366630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143366600_143368500
transcript_191867.known	chr8	+	3695	15	FSM	ENSG00000158106.14	ENST00000289013.11	3695	15	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_10	29.5507173848484	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGTAGGCACTAACTGGG	143366467	True	NA	9	True	AATAAA	-17	NA	143368875	143384221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143369048_143375552_143375669_143376524_143376654_143377379_143377456_143378268_143378347_143378695_143378821_143378911_143379079_143379314_143379509_143379828_143379986_143380061_143380176_143380588_143380784_143381267_143381345_143381571_143381719_143381806_143381969_143382435
transcript_191869.nic	chr8	+	2356	15	NIC	ENSG00000158106.14	novel	3695	15	NA	NA	-106	0	combination_of_known_junctions	TRUE	canonical	3	26	junction_10	29.823716764224	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGCCCATTAAAGACTGG	NA	False	NA	-7	True	NA	NA	NA	143368769	143382779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_143369048_143375552_143375669_143376524_143376654_143377379_143377456_143378268_143378347_143378695_143378821_143378911_143379079_143379314_143379509_143379828_143379986_143380064_143380176_143380588_143380784_143381267_143381345_143381571_143381719_143381806_143381969_143382435
transcript_19187.known	chr1	-	13115	6	FSM	ENSG00000117697.15	ENST00000366977.8	13115	6	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_2	24.5519856630783	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTAGTCTGTTCTTTTCA	-212785388	True	NA	0	True	AATAAA	-23	NA	212791777	212726152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_212738687_212739533_212739602_212782371_212782427_212784362_212784494_212787558_212787638_212791529
transcript_191904.nic	chr8	+	2705	14	NIC	ENSG00000158106.14	novel	3695	15	NA	NA	-106	0	intron_retention	FALSE	canonical	3	26	junction_9	29.5280430344408	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGCCCATTAAAGACTGG	NA	False	NA	-7	True	NA	NA	NA	143368769	143382779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_143369048_143375552_143375669_143376524_143376654_143377379_143377456_143378268_143378821_143378911_143379079_143379314_143379509_143379828_143379986_143380064_143380176_143380588_143380784_143381267_143381345_143381571_143381719_143381806_143381969_143382435
transcript_19192.known	chr1	-	1344	5	FSM	ENSG00000117697.15	ENST00000366978.5	1344	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	190.255748927595	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTAGTCTGTTCTTTTCA	-212791537	False	NA	0	True	AATAAA	-23	NA	212791581	212726152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_212727180_212782371_212782427_212784362_212784494_212787558_212787638_212791529
transcript_19193.known	chr1	-	722	5	FSM	ENSG00000117697.15	ENST00000366976.3	722	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	176.877605987869	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAGCAAACTAAAGACTG	-212785393	True	NA	NA	False	NA	NA	NA	212791782	212738482	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_212738687_212782371_212782427_212784362_212784494_212787558_212787638_212791529
transcript_191937.nic	chr8	+	3061	13	NIC	ENSG00000158106.14	novel	3695	15	NA	NA	-49	0	intron_retention	FALSE	canonical	3	27	junction_8	27.9288530615443	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGCCCATTAAAGACTGG	143366418	True	NA	-7	True	NA	NA	NA	143368826	143382779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_143369048_143375552_143375669_143376524_143376654_143377379_143377456_143378268_143378821_143378911_143379079_143379314_143379509_143379828_143379986_143380064_143380784_143381267_143381345_143381571_143381719_143381806_143381969_143382435
transcript_19196.known	chr1	-	685	3	FSM	ENSG00000117697.15	ENST00000487995.1	685	3	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_1	21	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGAAAGTTATAGTGAGT	-212785393	True	NA	NA	False	AATGAA	-3	NA	212791782	212784140	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_212784494_212787558_212787638_212791529
transcript_191978.nnic	chr8	+	2437	12	NIC	ENSG00000158106.14	novel	3656	14	NA	NA	-106	0	intron_retention	FALSE	canonical	2	4	junction_7	30.2458247921159	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGCCCATTAAAGACTGG	NA	False	NA	-7	True	NA	NA	NA	143368769	143382779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_143369048_143375552_143375669_143376524_143376654_143377379_143377456_143378268_143378821_143378911_143379079_143379314_143379509_143380588_143380784_143381267_143381345_143381571_143381719_143381806_143381969_143382435
transcript_19198.known	chr1	+	1381	10	FSM	ENSG00000203705.11	ENST00000532324.5	1381	10	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_8	109.276520921428	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCAACCTCCACTTCCCA	212789564	True	NA	NA	False	NA	NA	NA	212791827	212815597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212797111_212797197_212802700_212802764_212804319_212804430_212804595_212804652_212807735_212807849_212812226_212812329_212815012
transcript_191981.nnic	chr8	+	2345	12	NNC	ENSG00000158106.14	novel	3656	14	NA	NA	-49	0	intron_retention	FALSE	canonical	2	7	junction_7	29.6196271760734	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGCCCATTAAAGACTGG	143366418	True	NA	-7	True	NA	NA	NA	143368826	143382779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_143369048_143375552_143375669_143376524_143376654_143377379_143377456_143378268_143378821_143378911_143379079_143379314_143379509_143380623_143380784_143381267_143381345_143381571_143381719_143381806_143381969_143382435
transcript_191987.nic	chr8	+	3383	12	NIC	ENSG00000158106.14	novel	3695	15	NA	NA	-51	0	intron_retention	FALSE	canonical	3	27	junction_7	25.7957649160343	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGCCCATTAAAGACTGG	143366416	True	NA	-7	True	NA	NA	NA	143368824	143382779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_143369048_143375552_143375669_143376524_143376654_143377379_143377456_143378268_143378821_143378911_143379079_143379314_143379986_143380064_143380784_143381267_143381345_143381571_143381719_143381806_143381969_143382435
transcript_192.known	SIRV5	+	552	2	FSM	SIRV5A	SIRV506	552	2	0	0	0	0	multi-exon	FALSE	canonical	3	13272	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTACGGCCAGTTTAGC	NA	False	NA	NA	False	AATGAA	-17	NA	1008	2398	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV5_+_1150_1987
transcript_1920.known	chr1	-	2061	4	FSM	ENSG00000116251.11	ENST00000234875.9	2061	4	0	0	0	0	multi-exon	FALSE	canonical	3	4433	junction_3	985.051718890378	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGCTTTGTTTTTTTTAA	-6124124	True	NA	-1	True	ATTAAA	-30	NA	6199595	6185019	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6186817_6192929_6193055_6197651_6197757_6199561
transcript_192005.nic	chr8	+	3466	11	NIC	ENSG00000158106.14	novel	3656	14	NA	NA	-55	0	intron_retention	FALSE	canonical	3	49	junction_5	21.5844851687503	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGCCCATTAAAGACTGG	143366412	True	NA	-7	True	NA	NA	NA	143368820	143382779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_143369048_143375552_143375669_143376524_143376654_143377379_143377456_143378268_143378821_143378911_143379079_143379314_143380784_143381267_143381345_143381571_143381719_143381806_143381969_143382435
transcript_19202.known	chr1	+	2527	10	FSM	ENSG00000203705.11	ENST00000366974.9	2527	10	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_8	77.166646668264	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTATTTCTTTTCCCTA	212789630	True	NA	15	True	ATTAAA	-26	NA	212791893	212816830	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212797111_212797197_212802700_212802764_212804319_212804430_212804595_212804652_212807735_212807849_212812247_212812329_212815012
transcript_192038.known	chr8	-	2669	1	FSM	ENSG00000182759.4	ENST00000333480.3	2669	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACCGCAGCCTGGCTGGT	-143430515	True	NA	-3	True	AATAAA	-16	NA	143430732	143428063	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143428100_143430700
transcript_192046.known	chr8	-	3270	12	FSM	ENSG00000014164.7	ENST00000262577.6	3270	12	0	0	0	0	multi-exon	TRUE	canonical	3	229	junction_2	28.0975279051408	749	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTGGCTTGTCCTGACT	-143538677	True	NA	-5	True	AATAAA	-15	NA	143541447	143437658	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143438088_143440040_143440364_143440935_143441121_143465716_143465849_143468208_143468279_143468381_143468541_143468616_143468660_143475397_143475586_143507745_143507900_143536256_143536454_143538002_143539321_143541375
transcript_192054.known	chr8	+	1723	11	FSM	ENSG00000104518.11	ENST00000262580.9	1723	11	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_3	11.8932754109202	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGTAGCAGAGTTTTTG	143558276	False	NA	19	True	AATAAA	-19	NA	143558345	143563062	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143558452_143559331_143559553_143559776_143559970_143560602_143560772_143561001_143561105_143561369_143561424_143561741_143561829_143561958_143562132_143562208_143562351_143562447_143562522_143562661
transcript_19206.known	chr1	+	2321	10	FSM	ENSG00000203705.11	ENST00000366973.8	2321	10	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_8	83.003049177964	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAGTGATTTTATGAAAT	212789620	True	NA	14	True	AATAAA	-10	NA	212791883	212816617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212797111_212797197_212802700_212802764_212804319_212804430_212804595_212804652_212807735_212807849_212812250_212812329_212815012
transcript_192066.known	chr8	-	1682	13	FSM	ENSG00000147813.16	ENST00000449291.7	1682	13	0	0	0	0	multi-exon	TRUE	canonical	3	283	junction_8	34.4273591138727	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTCCTGTGTTGTTTGT	-143578307	False	NA	-2	True	GGGGCT	-38	NA	143578330	143574784	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143574901_143574985_143575094_143575190_143575346_143575422_143575526_143575621_143575703_143576077_143576163_143576431_143576573_143576645_143576843_143577061_143577178_143577268_143577400_143577656_143577740_143577815_143577944_143578092
transcript_192069.known	chr8	-	1654	13	FSM	ENSG00000147813.16	ENST00000426292.7	1654	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	96.0047380196531	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTTGTCCTGTGTTGTTT	-143578320	False	NA	-4	True	GGGGCT	-36	NA	143578343	143574786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143574901_143574985_143575094_143575229_143575346_143575422_143575526_143575621_143575703_143576077_143576163_143576431_143576573_143576645_143576843_143577061_143577178_143577268_143577400_143577656_143577740_143577815_143577944_143578092
transcript_192077.known	chr8	-	1877	11	FSM	ENSG00000147813.16	ENST00000435154.7	1877	11	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_6	35.258474158704	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTCCTGTGTTGTTTGT	-143578320	False	NA	-2	True	GGGGCT	-38	NA	143578343	143574784	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143575346_143575422_143575526_143575621_143575703_143576077_143576163_143576431_143576573_143576645_143576843_143577061_143577178_143577268_143577400_143577656_143577740_143577815_143577944_143578092
transcript_192097.known	chr8	-	2207	10	FSM	ENSG00000104529.19	ENST00000442189.6	2207	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	1803.933384114	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	-143578606	True	NA	-34	True	ATTAAA	-14	NA	143597415	143579727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586853_143588990_143590082_143590607_143590739_143597347
transcript_192099.known	chr8	-	2350	10	FSM	ENSG00000104529.19	ENST00000618139.4	2090	10	-260	0	4	0	multi-exon	FALSE	canonical	3	20	junction_9	1800.376071825	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	NA	False	NA	-34	True	ATTAAA	-14	NA	143597675	143579727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586853_143588990_143590082_143592646_143592661_143597347
transcript_192110.known	chr8	-	1132	9	FSM	ENSG00000104529.19	ENST00000419152.7	1132	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1675.8930781452	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGGCCCTCTGGCTCCG	-143578585	True	NA	-42	True	ATTAAA	-6	NA	143597394	143579735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586850_143593892_143594072_143597347
transcript_192114.known	chr8	-	1093	9	FSM	ENSG00000104529.19	ENST00000531218.6	1093	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	1674.84118650098	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGGCCCTCTGGCTCCG	-143578571	True	NA	-42	True	ATTAAA	-6	NA	143597380	143579735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586853_143592646_143592798_143597347
transcript_192124.known	chr8	-	861	8	FSM	ENSG00000104529.19	ENST00000529007.5	861	8	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	1332.6258565214	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTGGCTCCGTCCTGGT	-143578578	True	NA	-35	True	ATTAAA	-13	NA	143597387	143579728	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143579831_143580011_143580207_143580505_143580633_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586853_143597347
transcript_192129.known	chr8	-	1458	8	FSM	ENSG00000104529.19	ENST00000317198.10	1458	8	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_7	1348.88646441335	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACCTGGCCTGTCTCCCTC	-143578579	True	NA	-3	True	ATTAAA	-45	NA	143597388	143579696	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586853_143596878
transcript_192130.known	chr8	-	1311	8	FSM	ENSG00000104529.19	ENST00000529272.5	1311	8	0	0	0	0	multi-exon	FALSE	canonical	3	646	junction_7	1167.88975926494	1769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	NA	False	NA	-34	True	ATTAAA	-14	NA	143597744	143579727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586850_143597347
transcript_192140.known	chr8	-	899	8	FSM	ENSG00000104529.19	ENST00000529516.6	899	8	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_4	1557.08931755925	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGGCCCTCTGGCTCCG	-143578588	True	NA	-42	True	ATTAAA	-6	NA	143597397	143579735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581285_143581329_143586218_143586291_143586728_143586850_143597347
transcript_192144.known	chr8	-	831	7	FSM	ENSG00000104529.19	ENST00000533833.5	831	7	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	1699.79849295929	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	-143578619	True	NA	-34	True	ATTAAA	-14	NA	143597428	143579727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143579831_143580011_143580207_143580505_143580633_143581053_143581155_143581228_143581329_143586728_143586853_143597347
transcript_192154.known	chr8	-	886	7	FSM	ENSG00000104529.19	ENST00000534377.6	886	7	0	0	0	0	multi-exon	FALSE	canonical	3	646	junction_6	1616.21316663366	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGGCCCTCTGGCTCCG	-143578590	True	NA	-42	True	ATTAAA	-6	NA	143597399	143579735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586728_143586850_143597347
transcript_192156.known	chr8	-	840	7	FSM	ENSG00000104529.19	ENST00000531621.5	840	7	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_4	1664.47376568892	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTGGCTCCGTCCTGGT	-143578591	True	NA	-35	True	ATTAAA	-13	NA	143597400	143579728	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581285_143581329_143586728_143586853_143597347
transcript_19217.known	chr1	+	794	9	FSM	ENSG00000203705.11	ENST00000526997.5	794	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	127.454832685936	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAGAATCTGAACTGAAG	212789642	True	NA	-88	True	AATAGA	-10	NA	212791905	212815225	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212797111_212797197_212802700_212802764_212804319_212804430_212804595_212804652_212812250_212812329_212815012
transcript_192171.known	chr8	-	2678	6	FSM	ENSG00000104524.14	ENST00000220966.10	2678	6	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_3	5.38144961882948	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAAGGTC	-143599158	False	NA	NA	False	NA	NA	NA	143609614	143603912	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143605883_143606061_143606155_143606466_143606680_143606952_143607133_143608061_143608127_143609457
transcript_192172.known	chr8	-	1000	6	FSM	ENSG00000104524.14	ENST00000433751.5	1000	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	60.6695969988264	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCGTGGTGGTGGCTCTG	-143599113	False	10456	NA	False	NA	NA	NA	143609569	143605485	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143605883_143606061_143606155_143606466_143606620_143606952_143607133_143608061_143608127_143609457
transcript_192187.known	chr8	-	996	2	FSM	ENSG00000104529.19	ENST00000526710.1	996	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCCCTACTGTTACTTC	-143578633	True	NA	NA	False	NA	NA	NA	143597442	143589180	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143590082_143597347
transcript_192188.known	chr8	-	533	3	FSM	ENSG00000104529.19	ENST00000530109.5	533	3	0	0	0	0	multi-exon	FALSE	canonical	3	4144	junction_1	100.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	-143580717	False	NA	-34	True	ATTAAA	-14	NA	143580740	143579727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143579831_143580011_143580207_143580505
transcript_192189.known	chr8	-	419	4	FSM	ENSG00000104529.19	ENST00000532400.1	419	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1750.17161063327	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGTCCTGGTCATTTCC	-143578587	True	NA	-28	True	ATTAAA	-20	NA	143597396	143579721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143579831_143580011_143580174_143586753_143586853_143597347
transcript_19219.known	chr1	+	1073	9	FSM	ENSG00000203705.11	ENST00000526641.5	1073	9	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_4	120.81798034647	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTTTTATATAGAACCACC	212789606	True	NA	102	True	NA	NA	NA	212791869	212815415	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212797111_212797197_212804319_212804430_212804595_212804652_212807735_212807849_212812247_212812329_212815012
transcript_192192.known	chr8	-	1324	11	FSM	ENSG00000104522.16	ENST00000529064.5	1324	11	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_10	200.976142862779	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCTTGGCAGCTCTGTG	-143607026	True	NA	-11	True	AATAAA	-17	NA	143617482	143612617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143612966_143613195_143613296_143613523_143613604_143613750_143613818_143614163_143614229_143614319_143614454_143614623_143614698_143614786_143614916_143616105_143616221_143616566_143616724_143617427
transcript_192196.known	chr8	-	1345	11	FSM	ENSG00000104522.16	ENST00000425753.7	1345	11	0	0	0	0	multi-exon	FALSE	canonical	3	486	junction_10	91.1757094844893	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCTTGGCAGCTCTGTG	NA	False	NA	-11	True	AATAAA	-17	NA	143617549	143612617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143612966_143613195_143613296_143613523_143613604_143613750_143613818_143614163_143614229_143614319_143614454_143614623_143614698_143614786_143614916_143616105_143616221_143616566_143616724_143617473
transcript_192197.known	chr8	-	2220	9	FSM	ENSG00000104522.16	ENST00000531473.5	2220	9	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_3	51.9974458507339	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCTTGGCAGCTCTGTG	-143607048	True	NA	-11	True	AATAAA	-17	NA	143617504	143612617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143612966_143613195_143613296_143613523_143613604_143613750_143613818_143614163_143614229_143614319_143614698_143614786_143614916_143616105_143616221_143616566
transcript_192200.known	chr8	+	3960	2	FSM	ENSG00000183309.12	ENST00000526926.6	3960	2	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGTTTCAGTAGTTC	143634345	True	NA	NA	False	NA	NA	NA	143636018	143653730	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143636146_143649897
transcript_192201.known	chr8	+	2733	2	FSM	ENSG00000183309.12	ENST00000458270.2	2733	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGTGTAATTGGCATCT	143634488	False	NA	13	True	AATAAA	-16	NA	143636161	143652376	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143636416_143649897
transcript_192208.known	chr8	+	577	6	FSM	ENSG00000181135.16	ENST00000528456.5	577	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	5.01996015920445	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGAAGGGCTTCAGGCTG	143683286	True	NA	NA	False	AAGAAA	-41	NA	143684461	143693772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143684543_143690056_143690124_143691072_143691200_143691599_143691714_143692244_143692331_143693670
transcript_192210.known	chr8	+	2185	6	FSM	ENSG00000181135.16	ENST00000358656.9	2185	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.57820925690384	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGCTTTTGCCTGTTTT	143683303	True	NA	10	True	NA	NA	NA	143684478	143695385	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143684543_143689203_143689302_143690056_143690124_143691072_143691200_143691599_143691714_143693670
transcript_192211.known	chr8	+	556	6	FSM	ENSG00000181135.16	ENST00000531985.5	556	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.70744091837593	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAAGAAAACCCACGTGCG	143683303	True	NA	NA	False	NA	NA	NA	143684478	143693723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143684543_143689203_143689302_143690056_143690124_143691072_143691233_143691599_143691714_143693670
transcript_192212.known	chr8	+	567	5	FSM	ENSG00000181135.16	ENST00000534303.5	567	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	2.58602010819715	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCAAGCCCACGGCTTTCC	143683277	True	NA	NA	False	NA	NA	NA	143684452	143693839	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143684543_143690056_143690124_143691072_143691200_143691599_143691714_143693670
transcript_192213.known	chr8	+	2114	5	FSM	ENSG00000181135.16	ENST00000533031.5	2114	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	3.64005494464026	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGCCGTGTTTCAGGTT	143683280	True	NA	-19	True	NA	NA	NA	143684455	143695356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143684543_143690056_143690124_143691072_143691233_143691599_143691714_143693670
transcript_192215.known	chr8	+	1871	14	FSM	ENSG00000181085.15	ENST00000338033.9	1871	14	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_8	6.7893058964973	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAGCAGCCATCGTTCCT	143716096	True	NA	8	True	AATAAA	-18	NA	143716348	143722458	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143716444_143717693_143717793_143718046_143718077_143718211_143718303_143718774_143718906_143718992_143719157_143719342_143719483_143720229_143720288_143720702_143720841_143720999_143721106_143721230_143721412_143721548_143721674_143721751_143721881_143722074
transcript_192228.known	chr8	-	5143	36	FSM	ENSG00000180900.20	ENST00000320476.7	5143	36	0	0	0	0	multi-exon	TRUE	canonical	3	236	junction_33	80.86651131996	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGCCTGTCCATCCCCC	-143815306	False	NA	-1	True	AATAAA	-21	NA	143815379	143790919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143791309_143791388_143791441_143791875_143791914_143791990_143792134_143792219_143792406_143792484_143792636_143792707_143792868_143792975_143793084_143793899_143793963_143795037_143795113_143795276_143795334_143795419_143795531_143803382_143803572_143803646_143803941_143804045_143804157_143804567_143804826_143804933_143805015_143805111_143805436_143806406_143806485_143806923_143807014_143807551_143807615_143808608_143809026_143809550_143809719_143810478_143810605_143810685_143810817_143810905_143811073_143811145_143811346_143812265_143812385_143812816_143812962_143813029_143813105_143813310_143813375_143813469_143813527_143813636_143813727_143813817_143813897_143814000_143814119_143815213
transcript_192244.known	chr8	-	1842	12	FSM	ENSG00000179950.14	ENST00000453551.6	1842	12	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_11	621.597767952851	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCCGTGTGTCTGCCGTCG	-143828971	False	20809	-28	True	GATAAA	-25	NA	143829026	143816376	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143820665_143820717_143821596_143821687_143821817_143821914_143824312_143824400_143828983
transcript_192246.known	chr8	-	1868	12	FSM	ENSG00000179950.14	ENST00000526683.6	1868	12	0	0	0	0	multi-exon	FALSE	canonical	3	783	junction_7	456.237650121545	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGGCGTGTGTCCTTAG	-143808506	True	NA	5	True	NA	NA	NA	143829315	143816343	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143820665_143820717_143821596_143821687_143821817_143821914_143824312_143824400_143829279
transcript_192256.known	chr8	-	1736	11	FSM	ENSG00000179950.14	ENST00000456095.6	1736	11	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_10	613.889371141088	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCCGTGTGTCTGCCGTCG	-143829248	False	NA	-28	True	GATAAA	-25	NA	143829303	143816376	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143820665_143820717_143821596_143821687_143821817_143821914_143829279
transcript_192257.known	chr8	-	1804	11	FSM	ENSG00000179950.14	ENST00000313352.11	1804	11	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_10	588.825959006564	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCCGTGTGTCTGCCGTCG	-143828984	False	20809	-28	True	GATAAA	-25	NA	143829039	143816376	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143821596_143821687_143821817_143821914_143824312_143824400_143828983
transcript_192259.known	chr8	-	1821	11	FSM	ENSG00000179950.14	ENST00000349157.10	1821	11	0	0	0	0	multi-exon	FALSE	canonical	3	1020	junction_7	364.01565900384	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCCGTGTGTCTGCCGTCG	-143808543	True	NA	-28	True	GATAAA	-25	NA	143829352	143816376	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143821596_143821687_143821817_143821914_143824312_143824400_143829279
transcript_192269.known	chr8	-	1559	10	FSM	ENSG00000179950.14	ENST00000527197.5	1559	10	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_9	576.261514707805	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGGTCCCTCTCCCCGGA	-143808511	True	NA	NA	False	NA	NA	NA	143829320	143816519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143821596_143821687_143821817_143821914_143829279
transcript_19227.known	chr1	+	498	6	FSM	ENSG00000203705.11	ENST00000488246.6	498	6	0	0	0	0	multi-exon	FALSE	canonical	3	381	junction_5	21.918029108476	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAACTCTACATTTATTTT	212789660	True	NA	5	True	ATTAAA	-24	NA	212791923	212804498	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212797111_212797197_212802700_212802764_212804319
transcript_19228.known	chr1	+	2206	9	FSM	ENSG00000203705.11	ENST00000525574.5	2206	9	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_3	133.718687923566	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTATGAAATGATCTTCAA	212789662	True	NA	23	True	AATAAA	-19	NA	212791925	212816626	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212802700_212802764_212804319_212804430_212804595_212804652_212807735_212807849_212812247_212812329_212815012
transcript_192283.nnic	chr8	+	2674	3	NNC	ENSG00000287222.1	novel	2674	2	NA	NA	-441	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	0.5	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATACTTTTGTCTCTGTG	143828962	True	NA	NA	False	NA	NA	NA	143829076	143832861	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_143829405_143829845_143830039_143830708
transcript_192285.known	chr8	-	3724	18	FSM	ENSG00000185189.18	ENST00000442628.7	3724	18	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_14	12.7164988326408	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAACTCTCTTAACTGTTT	-143839488	True	NA	NA	False	AATAAA	-37	NA	143840973	143833582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143835731_143835819_143835876_143835966_143836031_143836126_143836181_143837038_143837175_143837248_143837300_143837406_143837510_143837622_143837756_143838679_143838776_143838882_143838939_143839016_143839101_143839171_143839196_143839313_143839409_143839508_143839550_143839735_143839826_143839928_143840031_143840106_143840230_143840705
transcript_192288.known	chr8	-	3877	17	FSM	ENSG00000185189.18	ENST00000533093.5	3877	17	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	10.7265368945434	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCTCCAAATTCAACTCT	-143839466	True	NA	NA	False	AATAAA	-26	NA	143840951	143833593	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143835731_143835819_143835876_143835966_143836031_143836126_143836181_143837038_143837175_143837248_143837300_143837406_143837510_143837622_143837756_143838679_143838776_143838882_143838939_143839016_143839101_143839171_143839196_143839313_143839409_143839508_143839826_143839928_143840031_143840106_143840230_143840705
transcript_19230.known	chr1	-	2565	2	FSM	ENSG00000198468.10	ENST00000356684.8	2565	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTATTTTCTTTTTTTTAT	-212856500	True	NA	NA	False	CATAAA	-16	NA	212858125	212852104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_212854310_212857765
transcript_19231.known	chr1	-	929	2	FSM	ENSG00000198468.10	ENST00000426161.7	942	2	13	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGCGGTCTTCCTGGAA	-212856500	True	NA	-26	True	AATAAA	-40	NA	212858125	212856603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_212857173_212857765
transcript_192316.known	chr8	+	1968	7	FSM	ENSG00000178719.17	ENST00000313269.5	1968	7	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	112.285969243218	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCCTGGTCACTCTTCT	143985464	True	NA	18	True	AATAAA	-18	NA	143990057	143993415	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143990312_143991199_143991603_143991691_143991805_143991877_143992079_143992244_143992374_143992464_143992609_143992691
transcript_192317.known	chr8	+	1858	7	FSM	ENSG00000178719.17	ENST00000395068.9	1858	7	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_2	46.639575469766	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCCTGGTCACTCTTCT	143985462	True	NA	18	True	AATAAA	-18	NA	143990055	143993415	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_143990200_143991199_143991603_143991691_143991805_143991877_143992079_143992244_143992374_143992464_143992609_143992691
transcript_19232.known	chr1	-	633	2	FSM	ENSG00000198468.10	ENST00000424044.2	633	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGCGGTCTTCCTGGAA	-212856458	True	NA	-26	True	AATAAA	-40	NA	212858083	212856603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_212856919_212857765
transcript_192324.nic	chr8	+	1658	6	NIC	ENSG00000178719.17	novel	1858	7	NA	NA	-1	0	combination_of_known_junctions	TRUE	canonical	3	27	junction_3	148.517473719425	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCCTGGTCACTCTTCT	143985461	True	NA	18	True	AATAAA	-18	NA	143990054	143993415	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_143990200_143991199_143991603_143991691_143991805_143992244_143992374_143992464_143992609_143992691
transcript_192330.known	chr8	-	3505	11	FSM	ENSG00000178685.14	ENST00000313028.12	3505	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	3.63868107973205	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACTGCGACCTCTGTT	-143986434	True	NA	-5	True	AATAAA	-36	NA	143986460	143977157	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_143977831_143977906_143978082_143982931_143983066_143983166_143983812_143984007_143984105_143984209_143984432_143984543_143985329_143985411_143985649_143985720_143985976_143986054_143986234_143986357
transcript_192332.known	chr8	-	4020	27	FSM	ENSG00000178814.17	ENST00000618853.5	4020	27	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_26	14.5564093530801	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCGTGCTCCGAGTCGTGT	-144059290	True	NA	-3	True	NA	NA	NA	144060692	144051265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144051473_144051728_144051827_144051915_144052077_144052168_144052327_144052448_144052599_144052765_144052901_144052982_144053130_144053208_144053394_144054560_144054736_144054811_144054914_144055028_144055190_144055787_144055940_144056146_144056260_144056384_144056524_144056617_144056756_144056947_144057119_144057207_144057321_144057447_144057714_144057855_144057924_144058009_144058149_144058238_144058405_144058495_144058692_144058772_144058897_144058979_144059080_144059598_144059791_144059861_144060086_144060652
transcript_192338.nnic	chr8	-	4625	26	NNC	ENSG00000178814.17	novel	4020	27	NA	NA	-92	0	intron_retention	FALSE	canonical	2	7	junction_23	18.9021057028046	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCGTGCTCCGAGTCGTGT	NA	False	NA	-3	True	NA	NA	NA	144060784	144051265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_-_144051473_144051728_144051827_144051915_144052077_144052168_144052599_144052765_144052901_144052982_144053130_144053208_144053394_144054560_144054736_144054811_144054914_144055028_144055190_144055787_144055940_144056146_144056260_144056384_144056524_144056617_144056756_144056947_144057119_144057207_144057321_144057447_144057714_144057855_144057924_144058009_144058149_144058238_144058405_144058495_144058692_144058772_144058897_144058979_144059080_144059207_144059791_144059861_144060086_144060652
transcript_192361.known	chr8	+	842	3	FSM	ENSG00000178896.9	ENST00000316052.6	842	3	0	0	0	0	multi-exon	FALSE	canonical	2	362	junction_1	45	801	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTCACTGTACGTTATCA	144069646	True	NA	19	True	AATAAA	-20	NA	144078671	144080648	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144078900_144079942_144080150_144080241
transcript_192362.known	chr8	-	1264	1	FSM	ENSG00000255224.1	ENST00000524499.1	1264	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGCTGCAATCTGGGG	-144079151	False	NA	-11	True	AATAAA	-14	NA	144079265	144078001	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144078000_144079300
transcript_192370.known	chr8	+	2054	12	FSM	ENSG00000197858.11	ENST00000355091.9	2054	12	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_1	36.8447715433634	2483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGCTCCTGGCCCGCTG	144079294	True	NA	16	True	AATAAA	-23	NA	144082633	144086216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144082805_144083123_144083304_144083388_144083501_144083713_144083862_144083938_144084041_144084133_144084331_144084412_144084610_144084721_144084876_144085042_144085139_144085288_144085480_144085572_144085744_144085881
transcript_192399.known	chr8	+	1840	11	FSM	ENSG00000197858.11	ENST00000361036.10	1840	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	180.880623616793	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGCTCCTGGCCCGCTG	144079328	True	NA	16	True	AATAAA	-23	NA	144082667	144086216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144082805_144083388_144083501_144083713_144083862_144083938_144084041_144084133_144084331_144084412_144084610_144084721_144084876_144085042_144085139_144085288_144085480_144085572_144085744_144085881
transcript_19247.nic	chr1	+	3626	11	NIC	ENSG00000162769.13	novel	5919	10	NA	NA	-55	1494	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	156.805133844527	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGGCGCAGTGCTGTGG	NA	False	NA	NA	False	ACTAAA	-31	NA	212858219	212896888	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_212859191_212863724_212863870_212864392_212864520_212872677_212872819_212883370_212883439_212885292_212885397_212887890_212888002_212888488_212888595_212889145_212889258_212894985_212895054_212895215
transcript_192497.known	chr8	+	1191	7	FSM	ENSG00000179091.5	ENST00000318911.5	1191	7	0	0	0	0	multi-exon	FALSE	canonical	3	4240	junction_3	145.057938616111	5239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATTTGAGTTATTATATG	144069250	True	NA	14	True	AATAAA	-18	NA	144095075	144097525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144095229_144095832_144096030_144096123_144096251_144096336_144096495_144096583_144096745_144097033_144097135_144097231
transcript_19251.known	chr1	+	5919	10	FSM	ENSG00000162769.13	ENST00000366971.9	5919	10	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_2	81.047463612532	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTGACTTTTTGAAA	212852361	True	NA	9	True	AATAAA	-19	NA	212858274	212899363	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_212859191_212863724_212863870_212872677_212872819_212883370_212883439_212885292_212885397_212887890_212888002_212888488_212888595_212889145_212889258_212894985_212895054_212895215
transcript_192511.known	chr8	+	1832	6	FSM	ENSG00000179091.5	ENST00000533444.1	1832	6	0	0	0	0	multi-exon	FALSE	canonical	3	4240	junction_2	137.428672408635	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATTTGAGTTATTATATG	144069213	True	NA	14	True	AATAAA	-18	NA	144095038	144097525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144096030_144096123_144096251_144096336_144096495_144096583_144096745_144097033_144097135_144097231
transcript_192517.known	chr8	-	1348	9	FSM	ENSG00000179526.17	ENST00000398712.7	1348	9	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_3	83.5434018938659	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCATCCCTTTCATGGT	-144099810	True	NA	-6	True	ATTAAA	-16	NA	144103773	144098636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144098789_144098865_144098995_144099080_144099206_144099276_144099431_144099509_144099619_144099702_144099845_144099928_144100070_144103050_144103226_144103552
transcript_192519.nic	chr8	-	2008	9	NIC	ENSG00000179526.17	novel	1348	9	NA	NA	-636	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_8	182.597533868889	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCATCCCTTTCATGGT	-144104637	True	NA	-6	True	ATTAAA	-16	NA	144104905	144098636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_144098789_144098865_144098995_144099080_144099206_144099276_144099431_144099509_144099619_144099702_144099845_144099928_144100070_144103050_144103226_144104024
transcript_192523.known	chr8	+	1715	8	FSM	ENSG00000179632.10	ENST00000322428.10	1715	8	0	0	0	0	multi-exon	FALSE	canonical	3	754	junction_6	62.9032298576998	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGACCTGATGCGGTGT	144084624	True	NA	22	True	AATAAA	-16	NA	144104460	144107611	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144104859_144105639_144105767_144105868_144105998_144106075_144106242_144106342_144106465_144106554_144106675_144106834_144106964_144107087
transcript_192526.known	chr8	+	1098	8	FSM	ENSG00000179632.10	ENST00000532522.5	1098	8	0	0	0	0	multi-exon	FALSE	canonical	1	24	junction_1	298.016709571248	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGTCCTGGCACTGCCC	144104947	True	NA	NA	False	NA	NA	NA	144104974	144107217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144105150_144105639_144105767_144105868_144105998_144106075_144106242_144106342_144106465_144106554_144106675_144106834_144106964_144107087
transcript_192533.nic	chr8	-	2566	8	NIC	ENSG00000179526.17	novel	1348	9	NA	NA	-651	0	intron_retention	FALSE	canonical	3	509	junction_2	35.3351302328353	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCATCCCTTTCATGGT	NA	False	NA	-6	True	ATTAAA	-16	NA	144104920	144098636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_144098789_144098865_144098995_144099080_144099431_144099509_144099619_144099702_144099845_144099928_144100070_144103050_144103226_144103552
transcript_192537.known	chr8	-	1687	8	FSM	ENSG00000179526.17	ENST00000359551.6	1687	8	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	168.834177795364	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCATCCCTTTCATGGT	-144103643	True	NA	-6	True	ATTAAA	-16	NA	144104237	144098636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144098789_144098865_144098995_144099276_144099431_144099509_144099619_144099702_144099845_144099928_144100070_144103050_144103226_144103552
transcript_192542.nic	chr8	+	2452	7	ISM	ENSG00000179632.10	ENST00000322428.10	1715	8	-616	3	-616	-3	intron_retention	FALSE	canonical	3	754	junction_6	65.2984600805325	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGTGGACCTGATGCGG	144103831	False	NA	19	True	AATAAA	-13	NA	144103844	144107608	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_144104859_144105639_144105767_144105868_144105998_144106075_144106242_144106342_144106465_144106554_144106675_144106834
transcript_192545.known	chr8	+	1754	7	FSM	ENSG00000179632.10	ENST00000534585.5	1754	7	0	0	0	0	multi-exon	FALSE	canonical	3	754	junction_5	67.9249994888153	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGACCTGATGCGGTGT	144084675	True	NA	22	True	AATAAA	-16	NA	144104511	144107611	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144104859_144105639_144105767_144105868_144105998_144106075_144106242_144106342_144106675_144106834_144106964_144107087
transcript_192568.known	chr8	-	613	2	FSM	ENSG00000179526.17	ENST00000531375.1	613	2	0	0	0	0	multi-exon	FALSE	canonical	3	517	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCAGCCTGCACTTCCTT	-144099793	True	NA	NA	False	NA	NA	NA	144103756	144102816	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144103226_144103552
transcript_192569.known	chr8	-	656	2	FSM	ENSG00000179526.17	ENST00000534435.1	656	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAAGGGTTGGTGCAGATA	-144103828	False	NA	NA	False	NA	NA	NA	144104096	144102641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144103226_144104024
transcript_192587.known	chr8	+	2534	6	FSM	ENSG00000235173.7	ENST00000347708.5	2534	6	0	0	0	0	multi-exon	TRUE	canonical	3	259	junction_3	22.2764449587451	973	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACCCTCAGTTTACTGGA	144136068	True	NA	14	True	AATAAA	-27	NA	144137773	144140851	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144138429_144138506_144138608_144138714_144138814_144139008_144139101_144139188_144139312_144139387
transcript_192611.known	chr8	+	5349	44	FSM	ENSG00000179832.18	ENST00000326134.10	5349	44	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_24	15.3525365520821	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAGTGACTGACAGGGTGC	144145310	True	NA	2	True	AATAAA	-15	NA	144148015	144261926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144148077_144160969_144161090_144163770_144163849_144168294_144168441_144179454_144179587_144180177_144180341_144180424_144180524_144190783_144190936_144191714_144191856_144192308_144192402_144199121_144199201_144200427_144200542_144220599_144220674_144223107_144223231_144238755_144238864_144239034_144239180_144239322_144239364_144239613_144239756_144240100_144240154_144240569_144240678_144240991_144241112_144241394_144241518_144242368_144242516_144242601_144242629_144243493_144243617_144243862_144243943_144244221_144244337_144244443_144244540_144245155_144245261_144247300_144247437_144247566_144247680_144248876_144249030_144250211_144250367_144254812_144254979_144255508_144255706_144258776_144258915_144259239_144259355_144259910_144260058_144260185_144260375_144260676_144260833_144260906_144261042_144261113_144261217_144261283_144261350_144261654
transcript_192616.nic	chr8	+	5202	42	NIC	ENSG00000179832.18	novel	5349	44	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	12.377177669696	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAGTGACTGACAGGGTGC	144145310	True	NA	2	True	AATAAA	-15	NA	144148015	144261926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_144148077_144163770_144163849_144168294_144168441_144179454_144179587_144180177_144180341_144180424_144180524_144190783_144190936_144191714_144191856_144192308_144192402_144199121_144199201_144200427_144200542_144220599_144220674_144223107_144223231_144238755_144238864_144239034_144239180_144239322_144239364_144239613_144239756_144240100_144240154_144240569_144240678_144240991_144241112_144241394_144241518_144242368_144242516_144243493_144243617_144243862_144243943_144244221_144244337_144244443_144244540_144245155_144245261_144247300_144247437_144247566_144247680_144248876_144249030_144250211_144250367_144254812_144254979_144255508_144255706_144258776_144258915_144259239_144259355_144259910_144260058_144260185_144260375_144260676_144260833_144260906_144261042_144261113_144261217_144261283_144261350_144261654
transcript_19262.known	chr1	+	1108	9	FSM	ENSG00000162769.13	ENST00000419102.1	1108	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	143.409324574799	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCATCCTTGGAGAGAGAT	212858904	False	NA	-60	True	NA	NA	NA	212858915	212895334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_212859191_212863724_212863870_212883370_212883439_212885292_212885397_212887890_212888002_212888488_212888595_212889145_212889258_212894985_212895054_212895215
transcript_192628.known	chr8	+	3905	31	FSM	ENSG00000179832.18	ENST00000532255.5	3905	31	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	12.1671689394041	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCATCCACTGCTGCCTGT	144145310	True	NA	NA	False	NA	NA	NA	144148015	144250753	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144148077_144163770_144163849_144168294_144168441_144179454_144179587_144180177_144180341_144180424_144180524_144190783_144190936_144191714_144191856_144192308_144192402_144199121_144199201_144200427_144200542_144220599_144220674_144223107_144223231_144238755_144238864_144239034_144239180_144239322_144239364_144239613_144239756_144240100_144240154_144240569_144240678_144240991_144241112_144241394_144241518_144242368_144242516_144243493_144243617_144243862_144243943_144244221_144244337_144244443_144244540_144245155_144245261_144247300_144247437_144247566_144247680_144248876_144249030_144250211
transcript_192633.nic	chr8	+	1837	13	NIC	ENSG00000179832.18	novel	1712	12	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_12	21.8040516112641	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGGGACATTTTTGTA	144145325	True	NA	6	True	AATAAA	-17	NA	144148030	144213467	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_144148077_144160969_144161090_144163770_144163849_144168294_144168441_144179454_144179587_144180177_144180341_144180424_144180524_144190783_144190936_144191714_144191856_144192308_144192402_144199121_144199201_144200427_144200542_144212993
transcript_192634.known	chr8	+	1712	12	FSM	ENSG00000179832.18	ENST00000423230.6	1712	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_11	19.5904345017394	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGGGACATTTTTGTA	144145330	True	NA	6	True	AATAAA	-17	NA	144148035	144213467	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144148077_144163770_144163849_144168294_144168441_144179454_144179587_144180177_144180341_144180424_144180524_144190783_144190936_144191714_144191856_144192308_144192402_144199121_144199201_144200427_144200542_144212993
transcript_192656.known	chr8	-	2428	16	FSM	ENSG00000261236.8	ENST00000569669.6	2428	16	0	0	0	0	multi-exon	FALSE	canonical	3	695	junction_11	105.517054966905	3829	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCCGAGCCTTCCCCTCAC	-144280863	True	NA	-5	True	NA	NA	NA	144291438	144262044	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144262318_144262395_144262504_144262587_144262673_144262852_144263142_144263220_144263402_144263477_144263611_144263691_144263762_144263830_144263912_144263980_144264143_144264224_144264438_144264514_144264617_144264713_144264832_144264916_144265072_144276223_144276305_144289094_144289305_144291271
transcript_192750.known	chr8	-	3653	17	FSM	ENSG00000185000.12	ENST00000528718.6	3653	17	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_10	10.8570253753042	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGGGTCAGTCCAGGT	-144325247	True	NA	-4	True	AATACA	-18	NA	144326852	144314583	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144316710_144316852_144316916_144317021_144317110_144317186_144317253_144317332_144317446_144317543_144317589_144317670_144317713_144317783_144317823_144317913_144318018_144318094_144318170_144318260_144318363_144318460_144318567_144318698_144318752_144318834_144318921_144319027_144319069_144321320_144321409_144326436
transcript_192772.nic	chr8	+	2320	14	NIC	ENSG00000185122.11	novel	2134	13	NA	NA	-93	0	combination_of_known_junctions	FALSE	canonical	3	147	junction_9	244.772252555925	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTATGGCCTCCATGTGT	NA	False	NA	31	True	TATAAA	-13	NA	144291497	144314716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_144291875_144308905_144309015_144309454_144309592_144309771_144309897_144311173_144311250_144311320_144311383_144311504_144311602_144311699_144311837_144311962_144312245_144312627_144312712_144313510_144313617_144313845_144313912_144313984_144314055_144314124
transcript_192791.known	chr8	+	2105	13	FSM	ENSG00000185122.11	ENST00000400780.8	2105	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	344.142039070433	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGATGGACGGACAAGACA	144279563	True	NA	-17	True	NA	NA	NA	144291590	144314668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144291875_144308905_144309015_144309454_144309592_144309771_144309897_144311173_144311250_144311320_144311383_144311504_144311602_144311699_144311837_144311962_144312245_144312627_144312712_144313510_144313617_144313984_144314055_144314132
transcript_192792.known	chr8	+	2134	13	FSM	ENSG00000185122.11	ENST00000528838.6	2134	13	0	0	0	0	multi-exon	FALSE	canonical	3	552	junction_9	85.0406765416801	1362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCCTCCATGTGTTTCC	144279576	True	NA	35	True	TATAAA	-17	NA	144291603	144314720	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144291875_144308905_144309015_144309454_144309592_144309771_144309897_144311173_144311250_144311320_144311383_144311504_144311602_144311699_144311837_144311962_144312245_144313510_144313617_144313845_144313912_144313984_144314055_144314124
transcript_1928.known	chr1	-	786	4	FSM	ENSG00000116251.11	ENST00000497965.5	786	4	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_3	2976.84053243629	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGTTTATCCTTGTATC	-6199956	True	NA	NA	False	AATAAA	-16	NA	6200842	6186614	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6186817_6192929_6193055_6197651_6197757_6200488
transcript_192870.known	chr8	-	1727	9	FSM	ENSG00000182325.11	ENST00000455319.6	1727	9	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_6	115.838249296163	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTGTGTGTGGTCCTC	-144354447	True	NA	-6	True	AATAAA	-13	NA	144358472	144355430	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144355679_144355967_144356215_144356299_144356532_144356599_144356714_144356807_144356916_144356989_144357122_144357456_144357503_144357627_144357787_144358031
transcript_19288.known	chr1	+	4224	9	FSM	ENSG00000143494.16	ENST00000366968.8	4224	9	0	0	0	0	multi-exon	FALSE	canonical	3	747	junction_2	285.968966847803	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTGTTTTTCTTCTAAAT	212922138	True	NA	17	True	AATAAA	-19	NA	212950593	212991585	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_212950741_212951338_212951393_212951588_212951819_212961165_212961255_212965721_212965779_212966270_212966346_212972579_212972962_212973954_212974071_212988511
transcript_192883.known	chr8	+	1780	6	FSM	ENSG00000185803.12	ENST00000676358.1	1780	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	208.643811314882	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCATTAATTCTTTGAGC	144356252	True	NA	32	True	AATAAA	-19	NA	144358627	144361276	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144359066_144359183_144359424_144359622_144359748_144360114_144360494_144360589_144360714_144360802
transcript_192885.nic	chr8	-	2493	6	ISM	ENSG00000182325.11	ENST00000331890.6	1745	9	-61	0	-61	0	intron_retention	FALSE	canonical	3	340	junction_5	26.8372874933366	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTGTGTGTGGTCCTC	-144354508	True	NA	-6	True	AATAAA	-13	NA	144358533	144355430	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_-_144355679_144355967_144356215_144356299_144356532_144356599_144356714_144356807_144356916_144356989
transcript_192890.known	chr8	+	2158	5	FSM	ENSG00000185803.12	ENST00000643944.2	2158	5	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_1	55.2827956963104	1326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGGCATTAATTCTTT	144356237	True	NA	28	True	AATAAA	-15	NA	144358612	144361272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144359066_144359183_144359424_144359622_144360494_144360589_144360714_144360802
transcript_192891.known	chr8	+	1673	5	FSM	ENSG00000185803.12	ENST00000675597.1	1673	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	224.401843798129	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGGCATTAATTCTTT	144356230	True	NA	28	True	AATAAA	-15	NA	144358605	144361272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144359066_144359183_144359424_144360114_144360494_144360589_144360714_144360802
transcript_192892.known	chr8	+	1757	5	FSM	ENSG00000185803.12	ENST00000530047.5	1757	5	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	201.695779579048	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGTTGGCATTAATTCT	144356181	True	NA	26	True	AATAAA	-13	NA	144358556	144361270	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144358611_144359183_144359424_144359622_144360494_144360589_144360714_144360802
transcript_192893.known	chr8	+	1879	5	FSM	ENSG00000185803.12	ENST00000675280.1	1879	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	236.504756823198	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGGCATTAATTCTTT	144356347	False	NA	28	True	AATAAA	-15	NA	144358722	144361272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144358901_144359187_144359424_144359622_144360494_144360589_144360714_144360802
transcript_192894.known	chr8	-	2007	5	FSM	ENSG00000182325.11	ENST00000524492.5	2007	5	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_3	16.0058583025091	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTGTGTGTGGTCCTC	-144353948	False	NA	-6	True	AATAAA	-13	NA	144357973	144355430	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144355679_144355967_144356215_144356299_144356532_144356599_144356714_144356807
transcript_192907.known	chr8	-	490	4	FSM	ENSG00000182325.11	ENST00000524909.1	490	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	190.533170048915	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAGTGGTGCCATACAC	-144352829	False	NA	NA	False	NA	NA	NA	144356854	144356135	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144356215_144356299_144356550_144356599_144356714_144356807
transcript_192915.known	chr8	-	604	3	FSM	ENSG00000182325.11	ENST00000527000.1	604	3	0	0	0	0	multi-exon	FALSE	canonical	3	401	junction_2	7	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAGTGAGAAGGACCTGG	-144352845	False	NA	NA	False	NA	NA	NA	144356870	144356087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144356215_144356299_144356714_144356807
transcript_192917.known	chr8	+	1910	5	FSM	ENSG00000185803.12	ENST00000329994.7	1910	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	239.946869118978	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTGAGCACATCTCTCT	144356217	True	NA	42	True	AATAAA	-29	NA	144358592	144361286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144358784_144359183_144359424_144359622_144360494_144360589_144360714_144360802
transcript_192929.known	chr8	-	4480	38	FSM	ENSG00000071894.17	ENST00000616140.2	4480	38	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_37	76.8452097879134	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAGTGTGTGGTCATTAC	-144403783	True	NA	-4	True	AAAACA	-25	NA	144409335	144393230	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144393366_144393451_144393591_144393666_144393797_144393882_144394039_144394112_144394161_144394233_144394301_144394378_144394556_144394643_144394797_144394881_144395024_144395097_144395183_144395264_144395356_144395434_144395552_144396347_144396501_144396597_144396742_144396839_144396930_144397206_144397414_144397486_144397662_144397742_144397880_144397953_144398133_144398301_144398444_144398524_144398639_144398778_144398869_144398957_144399039_144399127_144399203_144399275_144399374_144399451_144399504_144399587_144399711_144399780_144399869_144399991_144400086_144400165_144400277_144400353_144400494_144400670_144400818_144400923_144401076_144401210_144401292_144401429_144401564_144401645_144401674_144409014_144409173_144409288
transcript_192939.known	chr8	-	4462	37	FSM	ENSG00000071894.17	ENST00000620219.4	4462	37	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_27	67.9097076643813	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCGTGGATGCCGTCACCA	-144403736	True	NA	-91	True	NA	NA	NA	144409288	144393317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144393366_144393451_144393591_144393666_144393797_144393882_144394039_144394112_144394161_144394233_144394301_144394378_144394556_144394643_144394797_144394881_144395024_144395097_144395183_144395264_144395356_144395434_144395552_144396347_144396501_144396597_144396742_144396839_144396930_144397206_144397414_144397486_144397662_144397742_144397880_144397953_144398133_144398301_144398444_144398524_144398639_144398778_144398869_144398957_144399039_144399127_144399203_144399275_144399374_144399451_144399504_144399587_144399711_144399780_144399869_144399991_144400086_144400165_144400277_144400353_144400494_144400670_144400818_144400923_144401076_144401210_144401292_144401429_144401564_144401645_144401674_144409014
transcript_19298.nnic	chr1	+	3714	9	NNC	ENSG00000143494.16	novel	4224	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	273	junction_2	409.747483213747	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAACAAAACAAAACAA	212922085	True	NA	73	True	TTTAAA	-4	NA	212950540	212990910	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_212950741_212951181_212951348_212951588_212951819_212961165_212961255_212965721_212965779_212966270_212966346_212972579_212972962_212973954_212974071_212988511
transcript_19299.nnic	chr1	+	4389	9	NNC	ENSG00000143494.16	novel	4224	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	273	junction_2	409.747483213747	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTGTTTTTCTTCTAAAT	212922085	True	NA	17	True	AATAAA	-19	NA	212950540	212991585	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_212950741_212951181_212951348_212951588_212951819_212961165_212961255_212965721_212965779_212966270_212966346_212972579_212972962_212973954_212974071_212988511
transcript_192994.known	chr8	+	1960	15	FSM	ENSG00000173137.12	ENST00000308860.11	1960	15	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	10.8984177844347	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTCCTTGTGTTTTGT	144373066	True	NA	NA	False	NA	NA	NA	144374046	144393242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144374108_144379386_144379491_144383080_144383231_144390670_144390747_144390855_144391057_144391133_144391275_144391360_144391475_144391579_144391712_144391782_144391867_144391940_144392023_144392091_144392171_144392253_144392346_144392444_144392698_144392775_144392893_144392968
transcript_1930.known	chr1	-	1227	4	FSM	ENSG00000116237.16	ENST00000474756.1	1227	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	163.528454880353	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCCCCCACTGCATGAAC	-6226720	True	NA	-56	True	AAAACA	-25	NA	6235972	6224598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6225263_6231901_6232120_6234885_6234975_6235716
transcript_193013.known	chr8	+	2027	14	FSM	ENSG00000173137.12	ENST00000529654.5	2027	14	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_4	13.8739038161792	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTCCTTGTGTTTTGT	144373065	True	NA	NA	False	NA	NA	NA	144374045	144393242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144374108_144379386_144379491_144383080_144383231_144390670_144390747_144390860_144391057_144391133_144391275_144391360_144391475_144391579_144391867_144391940_144392023_144392091_144392171_144392253_144392346_144392444_144392698_144392775_144392893_144392968
transcript_193027.nic	chr8	+	2143	13	NIC	ENSG00000173137.12	novel	1960	15	NA	NA	-33	0	intron_retention	TRUE	canonical	3	33	junction_4	10.1087833095779	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTCCTTGTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	144374008	144393242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_144374108_144379386_144379491_144383080_144383231_144390670_144390747_144390855_144391057_144391133_144391275_144391360_144391475_144391579_144392023_144392091_144392171_144392253_144392346_144392444_144392698_144392775_144392893_144392968
transcript_193050.known	chr8	-	2123	12	FSM	ENSG00000147804.10	ENST00000301305.8	2123	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_11	29.6815049405718	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGGCTGTGCTCTCCTTG	-144416832	False	NA	-5	True	AGTAAA	-19	NA	144416844	144412413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144412667_144412758_144412947_144413236_144413390_144413512_144413568_144413749_144413882_144413957_144414096_144414261_144414435_144414724_144414897_144414973_144415111_144415226_144415420_144415809_144416092_144416597
transcript_193052.known	chr8	-	668	4	FSM	ENSG00000147804.10	ENST00000532718.5	668	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	3.09120616516523	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGGCTGTGCTCTCCTTG	-144412872	True	NA	-5	True	AGTAAA	-19	NA	144413586	144412413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144412667_144412758_144412947_144413236_144413390_144413512
transcript_193053.known	chr8	-	2778	3	FSM	ENSG00000147804.10	ENST00000529462.5	2778	3	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCACATGTTTCTGTGAG	-144412871	True	NA	NA	False	ATTAAA	-13	NA	144413585	144410394	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144412947_144413236_144413390_144413512
transcript_193054.known	chr8	-	795	3	FSM	ENSG00000147804.10	ENST00000531013.1	795	3	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATGGCTGTGCTCTCCTT	-144412877	True	NA	-6	True	AGTAAA	-18	NA	144413591	144412414	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144412667_144412758_144412947_144413236
transcript_193055.known	chr8	-	650	10	FSM	ENSG00000160948.14	ENST00000533806.5	650	10	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	107.337474040213	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGCTGTTCGACCTGGAG	-144424480	True	NA	NA	False	NA	NA	NA	144428548	144423863	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144423923_144424040_144424133_144424214_144424269_144424717_144424820_144424945_144425001_144425682_144425773_144426025_144426064_144426179_144426209_144426908_144426980_144428488
transcript_193058.known	chr8	-	948	10	FSM	ENSG00000160948.14	ENST00000292510.6	948	10	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_9	55.0434172065814	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTGGGTGGCTCCCCCA	-144424480	True	NA	-22	True	AATAAA	-18	NA	144428548	144423616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144423923_144424040_144424133_144424214_144424269_144424717_144424820_144424945_144425052_144425682_144425773_144426025_144426064_144426179_144426209_144426908_144426980_144428488
transcript_193064.nic	chr8	-	1556	9	NIC	ENSG00000160948.14	novel	948	10	NA	NA	18	0	intron_retention	FALSE	canonical	3	199	junction_8	55.7757787933078	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTGGGTGGCTCCCCCA	-144424457	True	NA	-22	True	AATAAA	-18	NA	144428525	144423616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_144423923_144424040_144424133_144424214_144424269_144424717_144424820_144424945_144425773_144426025_144426064_144426179_144426209_144426908_144426980_144428488
transcript_193070.known	chr8	-	573	9	FSM	ENSG00000160948.14	ENST00000531032.5	573	9	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_8	57.9459608169543	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCATGCACCGCATGAGC	-144424475	True	NA	NA	False	NA	NA	NA	144428543	144424104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144424133_144424214_144424269_144424717_144424820_144424945_144425052_144425682_144425773_144426025_144426064_144426179_144426209_144426908_144426980_144428488
transcript_193094.known	chr8	-	892	9	FSM	ENSG00000160948.14	ENST00000526054.5	892	9	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_5	35.3022662162077	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTGGGTGGCTCCCCCA	-144422915	False	NA	-22	True	AATAAA	-18	NA	144426983	144423616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144423923_144424040_144424133_144424214_144424269_144424717_144424820_144424945_144425052_144425682_144425773_144426025_144426064_144426179_144426209_144426908
transcript_193095.known	chr8	-	1010	8	FSM	ENSG00000160948.14	ENST00000529182.5	1010	8	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_4	37.7132034476749	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTGGGTGGCTCCCCCA	-144422915	False	NA	-22	True	AATAAA	-18	NA	144426983	144423616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144424133_144424214_144424269_144424717_144424820_144424945_144425052_144425682_144425773_144426025_144426064_144426179_144426209_144426908
transcript_19310.nic	chr1	+	3608	8	NIC	ENSG00000143494.16	novel	4224	9	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	308	junction_4	452.020994636131	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAACAAAACAAAACAA	212922128	True	NA	73	True	TTTAAA	-4	NA	212950583	212990910	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_212950741_212951338_212951393_212951588_212951819_212961165_212961361_212966270_212966346_212972579_212972962_212973954_212974071_212988511
transcript_193101.nnic	chr8	-	4482	27	NNC	ENSG00000160949.18	novel	4531	26	NA	NA	-56	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	78.083412007732	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCCCTCCCCGTGGCTG	-144436331	True	NA	-8	True	AATAAA	-15	NA	144444496	144428774	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_-_144429337_144430403_144430538_144431077_144431152_144432284_144432461_144433587_144433760_144433977_144434280_144434810_144434890_144435016_144435171_144435473_144435551_144435657_144436024_144436128_144436419_144436557_144436682_144436756_144436921_144437026_144437100_144438470_144438561_144438652_144438736_144440020_144440211_144440350_144440477_144440717_144440871_144440965_144441112_144442036_144442152_144442240_144442413_144442676_144442807_144443137_144443322_144443881_144444025_144444179_144444276_144444389
transcript_193110.known	chr8	-	4531	26	FSM	ENSG00000160949.18	ENST00000409379.8	4531	26	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_18	61.0777340771578	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCCCTCCCCGTGGCTG	-144436275	True	NA	-8	True	AATAAA	-15	NA	144444440	144428774	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144429337_144430403_144430538_144431077_144431152_144432284_144432461_144433587_144433760_144433977_144434280_144434810_144434890_144435016_144435171_144435473_144435551_144435657_144436419_144436557_144436682_144436756_144436921_144437026_144437100_144438470_144438561_144438652_144438736_144440020_144440211_144440350_144440477_144440717_144440871_144440965_144441112_144442036_144442152_144442240_144442413_144442676_144442807_144443137_144443322_144443881_144444025_144444179_144444276_144444389
transcript_193117.nic	chr8	-	4682	25	NIC	ENSG00000160949.18	novel	4531	26	NA	NA	-56	0	intron_retention	FALSE	canonical	3	187	junction_15	59.2142414364052	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCCCTCCCCGTGGCTG	-144436331	True	NA	-8	True	AATAAA	-15	NA	144444496	144428774	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_144429337_144430403_144430538_144431077_144431152_144432284_144432461_144433587_144433760_144433977_144434280_144434810_144434890_144435016_144435171_144435473_144435551_144435657_144436419_144436557_144436682_144436756_144436921_144437026_144437100_144438470_144438561_144438652_144438736_144440020_144440211_144440350_144440477_144440717_144441112_144442036_144442152_144442240_144442413_144442676_144442807_144443137_144443322_144443881_144444025_144444179_144444276_144444389
transcript_193139.nnic	chr8	-	1340	4	NNC	ENSG00000187954.13	novel	2229	4	NA	NA	-11	-349	at_least_one_novel_splicesite	TRUE	canonical	3	42	junction_3	81.249957264946	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTGTTTTGTTCGAGGG	-144462663	False	NA	-1	True	ATTAAA	-19	NA	144462882	144449930	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_-_144450771_144452358_144452571_144453221_144453461_144462833
transcript_19314.known	chr1	+	4473	8	FSM	ENSG00000143494.16	ENST00000517399.3	4473	8	0	0	0	0	multi-exon	FALSE	canonical	3	1072	junction_5	230.681510276991	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTGTTTTTCTTCTAAAT	212922085	True	NA	17	True	AATAAA	-19	NA	212950540	212991585	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_212950741_212951338_212951819_212961165_212961255_212965721_212965779_212966270_212966346_212972579_212972962_212973954_212974071_212988511
transcript_193143.known	chr8	-	853	3	FSM	ENSG00000187954.13	ENST00000533764.5	853	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	60.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTGGGTGTGGCAGGCC	-144464272	True	NA	NA	False	NA	NA	NA	144465434	144464274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144464613_144464808_144465097_144465207
transcript_193144.known	chr8	-	1216	3	FSM	ENSG00000187954.13	ENST00000306145.10	1216	3	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	33	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAAAACTGCCCATTTTT	-144464330	True	NA	-8	True	AATAAA	-21	NA	144465492	144463824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144464613_144464808_144465097_144465352
transcript_193145.known	chr8	-	581	3	FSM	ENSG00000187954.13	ENST00000530637.1	581	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	51	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTTGGCTGCCACCACCA	-144465624	False	NA	NA	False	GGGGCT	-21	NA	144465667	144464577	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144464613_144464808_144465097_144465409
transcript_193146.known	chr8	-	1162	3	FSM	ENSG00000187954.13	ENST00000424149.6	1162	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	47	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCCATTTTTGAGAGGGA	-144465605	False	NA	0	True	AATAAA	-29	NA	144465648	144463816	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144464613_144464808_144465097_144465570
transcript_193147.known	chr8	-	1477	2	FSM	ENSG00000187954.13	ENST00000403000.6	1477	2	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCCATTTTTGAGAGGGA	-144464327	True	NA	0	True	AATAAA	-29	NA	144465489	144463816	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144464613_144464808
transcript_193157.nnic	chr8	+	3265	18	NNC	ENSG00000167702.13	novel	3272	18	NA	NA	-14	1	intron_retention	TRUE	canonical	2	13	junction_1	11.1934855003729	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGGCTGCTGCCTGGTGT	144465998	False	NA	9	True	AATAAA	-16	NA	144466028	144474116	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_144466103_144466460_144466519_144466759_144466839_144466958_144467111_144467202_144467342_144467484_144467631_144467713_144467780_144467858_144467988_144468328_144468651_144468724_144468835_144469270_144469380_144469489_144469648_144471941_144472047_144472137_144472260_144472360_144472485_144472576_144472707_144472794_144473052_144473131
transcript_193162.known	chr8	+	3272	18	FSM	ENSG00000167702.13	ENST00000645548.2	3272	18	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_8	10.4434545981987	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGGGAGGGAGGAGTGGCC	144466326	True	NA	95	True	NA	NA	NA	144466336	144474202	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144466519_144466759_144466839_144466958_144467111_144467202_144467342_144467484_144467631_144467713_144467780_144467858_144467988_144468328_144468407_144468535_144468651_144468724_144468835_144469270_144469380_144469489_144469648_144471941_144472047_144472137_144472260_144472360_144472485_144472576_144472707_144472794_144473052_144473131
transcript_193169.known	chr8	+	3247	17	FSM	ENSG00000167702.13	ENST00000301332.3	3247	17	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_8	10.1949742520518	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAAGGCTGCTGCCTGGTG	144466344	False	NA	8	True	AATAAA	-15	NA	144466354	144474115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144466519_144466759_144466839_144466958_144467111_144467202_144467342_144467484_144467631_144467713_144467780_144467858_144467988_144468328_144468407_144468535_144468651_144468724_144468835_144469270_144469380_144469489_144469648_144471941_144472047_144472137_144472260_144472360_144472485_144472576_144472707_144472794
transcript_193186.known	chr8	-	492	3	FSM	ENSG00000160973.8	ENST00000525197.1	492	3	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_2	417.5	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGCCCAGTCCCCCGCCA	-144463736	True	NA	NA	False	NA	NA	NA	144475823	144474872	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144475057_144475156_144475224_144475582
transcript_193188.known	chr8	-	2017	3	FSM	ENSG00000160973.8	ENST00000377317.5	2017	3	0	0	0	0	multi-exon	FALSE	canonical	3	778	junction_2	119	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCAGGGCCGCGACCCAG	-144463762	True	NA	NA	False	NA	NA	NA	144475849	144473411	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144475057_144475156_144475262_144475582
transcript_193206.nic	chr8	+	2723	13	NIC	ENSG00000160972.10	novel	2864	12	NA	NA	23	0	intron_retention	FALSE	canonical	1	8	junction_3	27.6559969385786	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCGTTGTGTGTTGTGT	144477044	True	NA	18	True	GATAAA	-18	NA	144478005	144502120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_144478128_144490033_144490213_144496460_144497294_144497409_144497454_144498769_144498841_144498915_144499062_144500095_144500200_144500266_144500392_144500486_144500613_144500685_144500762_144500841_144500972_144501128_144501295_144501519
transcript_193211.nic	chr8	+	2980	13	NIC	ENSG00000160972.10	novel	2864	12	NA	NA	-7	0	intron_retention	TRUE	canonical	0	0	junction_2	38.0171744814834	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCGTTGTGTGTTGTGT	144477905	False	NA	18	True	GATAAA	-18	NA	144477961	144502120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_144478128_144478585_144478683_144490033_144490213_144496460_144497454_144498769_144498841_144498915_144499062_144500095_144500200_144500266_144500392_144500486_144500613_144500685_144500762_144500841_144500972_144501128_144501295_144501519
transcript_193228.known	chr8	+	2864	12	FSM	ENSG00000160972.10	ENST00000435887.2	2864	12	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	12.7855807212721	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCGTTGTGTGTTGTGTG	144477020	True	NA	19	True	GATAAA	-19	NA	144477981	144502121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144478128_144490033_144490213_144496460_144497454_144498769_144498841_144498915_144499062_144500095_144500200_144500266_144500392_144500486_144500613_144500685_144500762_144500841_144500972_144501128_144501295_144501519
transcript_19326.known	chr1	+	1206	7	FSM	ENSG00000143494.16	ENST00000366967.6	1206	7	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_1	391.438657036096	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATCTCTTGAACTTTTG	212922211	False	NA	NA	False	AGTAAA	-10	NA	212950666	212988924	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_212950741_212961165_212961255_212965721_212965779_212966270_212966346_212972579_212972962_212973954_212974071_212988511
transcript_193272.known	chr8	+	807	2	FSM	ENSG00000160972.10	ENST00000528430.2	807	2	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCGTTGTGTGTTGTGT	144500488	True	NA	18	True	GATAAA	-18	NA	144501088	144502120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144501295_144501519
transcript_193273.known	chr8	+	1552	5	FSM	ENSG00000167700.9	ENST00000301327.5	1552	5	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_1	60.2261363529158	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTGTGCCTGGAATAT	144509018	False	NA	32	True	AATAAA	-24	NA	144509069	144511213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144510016_144510359_144510508_144510597_144510723_144510793_144510904_144510990
transcript_193284.known	chr8	+	1433	3	FSM	ENSG00000167700.9	ENST00000528047.5	1433	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	277	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAATAAAGCCACATGTGC	144507736	True	NA	0	True	NA	NA	NA	144509079	144511181	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144510016_144510597_144510904_144510990
transcript_193287.nnic	chr8	-	3774	22	NNC	ENSG00000160957.15	novel	3819	21	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_17	93.8044233566298	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATGGGCCCTCTTGGC	-144517879	False	NA	-21	True	AATAAA	-15	NA	144517890	144511293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_-_144511556_144511680_144511790_144511910_144512068_144512143_144512325_144512391_144512562_144512641_144512772_144512846_144513139_144513217_144513481_144513570_144513713_144513927_144514108_144514188_144514363_144514441_144514526_144514935_144515073_144515149_144515243_144515325_144515458_144515763_144515891_144515987_144516070_144516165_144516765_144517049_144517191_144517413_144517509_144517601_144517636_144517700
transcript_1933.known	chr1	+	551	3	FSM	ENSG00000158286.13	ENST00000484435.1	551	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	1	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAATGCTTGCACATGCA	6206078	False	NA	NA	False	NA	NA	NA	6206128	6207564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_6206303_6206535_6206727_6207378
transcript_193302.nic	chr8	-	3519	21	NIC	ENSG00000160957.15	novel	3819	21	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_17	97.0474110937536	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATGGGCCCTCTTGGC	-144517879	False	NA	-21	True	AATAAA	-15	NA	144517890	144511293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_144511556_144511680_144511790_144511910_144512068_144512143_144512325_144512391_144512562_144512641_144512772_144512846_144513139_144513217_144513481_144513570_144513713_144513927_144514108_144514188_144514363_144514441_144514526_144514935_144515073_144515149_144515243_144515325_144515458_144515763_144515891_144515987_144516414_144517049_144517191_144517413_144517509_144517601_144517636_144517700
transcript_193304.known	chr8	-	3819	21	FSM	ENSG00000160957.15	ENST00000617875.6	3819	21	0	0	0	0	multi-exon	TRUE	canonical	3	137	junction_20	71.0939343404204	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCCCTCTTGGCCAATGA	-144512940	True	NA	-15	True	AATAAA	-21	NA	144517833	144511287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144511556_144511680_144511790_144511910_144512068_144512143_144512325_144512391_144512562_144512641_144512772_144512846_144513139_144513217_144513481_144513570_144513713_144513927_144514108_144514188_144514363_144514441_144514526_144514935_144515073_144515149_144515243_144515325_144515458_144515763_144515891_144515987_144516765_144517049_144517191_144517413_144517509_144517601_144517636_144517700
transcript_193310.nnic	chr8	-	3868	20	NNC	ENSG00000160957.15	novel	3896	20	NA	NA	-39	0	intron_retention	FALSE	canonical	3	23	junction_4	89.4699999241455	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATGGGCCCTCTTGGC	-144512991	True	NA	-21	True	AATAAA	-15	NA	144517884	144511293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_-_144511556_144511680_144511790_144511910_144512068_144512143_144512264_144512391_144512562_144512641_144512772_144512846_144513139_144513217_144513481_144513570_144513713_144513927_144514108_144514188_144514363_144514441_144514526_144514935_144515073_144515149_144515243_144515325_144515458_144515763_144515891_144515987_144516765_144517049_144517191_144517413_144517509_144517601
transcript_193319.known	chr8	-	3896	20	FSM	ENSG00000160957.15	ENST00000621189.4	3896	20	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_15	58.0834722678708	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCCCTCTTGGCCAATGA	-144512952	True	NA	-15	True	AATAAA	-21	NA	144517845	144511287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144511556_144511680_144511790_144511910_144512068_144512143_144512325_144512391_144512562_144512641_144512772_144512846_144513139_144513217_144513481_144513570_144513713_144513927_144514108_144514188_144514363_144514441_144514526_144514935_144515073_144515149_144515243_144515325_144515458_144515763_144515891_144515987_144516765_144517049_144517191_144517413_144517509_144517601
transcript_19332.nnic	chr1	+	790	7	NNC	ENSG00000143494.16	novel	4224	9	NA	NA	-10	-1753	at_least_one_novel_splicesite	FALSE	canonical	3	124	junction_6	508.668741804417	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTACATTTTGTTCATC	212922128	True	NA	8	True	AATAAA	-15	NA	212950583	212971165	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_212950741_212951338_212951393_212951588_212951819_212961165_212961255_212965721_212965779_212966270_212966346_212971037
transcript_193326.nic	chr8	-	3731	20	NIC	ENSG00000160957.15	novel	3896	20	NA	NA	-39	0	intron_retention	FALSE	canonical	3	16	junction_7	91.5863578368976	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATGGGCCCTCTTGGC	-144512991	True	NA	-21	True	AATAAA	-15	NA	144517884	144511293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_144511556_144511680_144511790_144511910_144512068_144512143_144512325_144512391_144512562_144512641_144512772_144512846_144513139_144513415_144513481_144513570_144513713_144513927_144514108_144514188_144514363_144514441_144514526_144514935_144515073_144515149_144515243_144515325_144515458_144515763_144515891_144515987_144516765_144517049_144517191_144517413_144517509_144517601
transcript_193384.nnic	chr8	-	1784	5	NNC	ENSG00000213563.7	novel	1637	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_4	65.9142435289976	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTATTCCATTAAAACTTT	-144526215	True	NA	-39	True	NA	NA	NA	144529111	144526251	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_-_144526640_144526959_144527788_144528023_144528073_144528267_144528436_144528760
transcript_193389.nic	chr8	+	2144	4	NIC	ENSG00000160959.8	novel	2243	5	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_1	75.19012937584	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGGCTGTTTTTTTTTC	144516577	True	NA	12	True	NA	NA	NA	144517950	144522024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_+_144518042_144519700_144520055_144520237_144520823_144520910
transcript_193390.known	chr8	+	5337	4	FSM	ENSG00000160959.8	ENST00000292524.6	5337	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	74.7187318474349	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAACATTTTCTTAAAGC	144516618	True	NA	35	True	AATAAA	-23	NA	144517991	144525172	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144518042_144519614_144520055_144520237_144520823_144520910
transcript_193391.nnic	chr8	+	1997	4	NNC	ENSG00000160959.8	novel	2243	5	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	98.7600909049579	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGGCTGTTTTTTTTTC	144516591	True	NA	12	True	NA	NA	NA	144517964	144522024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_144518042_144519833_144520055_144520237_144520823_144520910
transcript_193394.nnic	chr8	-	2134	4	NNC	ENSG00000213563.7	novel	2455	3	NA	NA	0	-3	intron_retention	FALSE	canonical	3	38	junction_3	75.7070376884181	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTATTTCTAGTGACTT	-144526215	True	NA	-9	True	ATTAAA	-16	NA	144529111	144526221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_-_144527788_144528023_144528073_144528267_144528436_144528760
transcript_193395.nic	chr8	-	2164	4	NIC	ENSG00000213563.7	novel	1637	4	NA	NA	6	-3	intron_retention	FALSE	canonical	3	6	junction_3	85.2499592701108	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTATTTCTAGTGACTT	-144526209	True	NA	-9	True	ATTAAA	-16	NA	144529105	144526221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr8_-_144527788_144528023_144528073_144528267_144528472_144528760
transcript_193397.known	chr8	-	1637	4	FSM	ENSG00000213563.7	ENST00000534680.5	1637	4	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	39.3474550920669	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTATTCCATTAAAACTTT	NA	False	NA	-39	True	NA	NA	NA	144529132	144526251	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144526640_144526959_144527788_144528023_144528073_144528760
transcript_1934.known	chr1	-	9850	42	FSM	ENSG00000116254.18	ENST00000262450.8	9850	42	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.27063573440303	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAGGCTTTTTCTTTTTA	-6180191	False	130	-2	True	AATAAA	-21	NA	6180321	6101786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6105428_6106233_6106288_6106394_6106510_6106615_6106780_6109794_6109991_6110393_6110527_6111774_6111884_6112139_6112278_6112908_6112999_6121104_6121238_6121493_6121574_6123947_6124108_6124516_6124662_6125099_6125234_6125523_6125613_6125765_6125859_6126571_6126747_6128045_6128219_6128498_6128610_6128837_6129070_6130203_6130329_6131630_6131749_6134127_6134260_6134717_6134860_6135229_6135404_6136516_6136639_6136727_6136866_6142127_6142329_6142413_6142606_6143822_6143932_6144023_6144156_6146211_6146424_6146664_6146872_6148853_6149076_6149245_6149413_6151031_6151156_6152411_6152537_6154659_6154899_6155598_6155718_6159335_6159516_6168149_6168278_6179944
transcript_193400.known	chr8	+	978	3	FSM	ENSG00000160959.8	ENST00000527730.1	978	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	80	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGCTCAGGTGAGCGGG	144516618	True	NA	NA	False	NA	NA	NA	144517991	144520811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144518042_144519700_144520055_144520237
transcript_193402.known	chr8	-	2455	3	FSM	ENSG00000213563.7	ENST00000524821.6	2455	3	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_2	9	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACCCATGGCTCCTGAAC	-144526215	True	NA	NA	False	NA	NA	NA	144529111	144525732	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144527788_144528023_144528073_144528760
transcript_193405.known	chr8	-	2186	2	FSM	ENSG00000213563.7	ENST00000313465.5	2186	2	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTTCTAGTGACTTTAA	-144526196	True	NA	-6	True	ATTAAA	-19	NA	144529092	144526218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144528073_144528760
transcript_193407.nnic	chr8	-	4887	12	FSM	ENSG00000147799.12	ENST00000377307.7	4830	12	-57	0	-57	0	multi-exon	FALSE	canonical	3	38	junction_5	8.06891802018889	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCGTCCTCCCGTTCCTTGT	NA	False	NA	0	True	AATAAA	-17	NA	144685903	144529178	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144530617_144530701_144530872_144532304_144532397_144533125_144533326_144534128_144534203_144537720_144537814_144545248_144545811_144547126_144548490_144555559_144555644_144580845_144581278_144605534_144605696_144685685
transcript_193411.known	chr8	+	693	2	FSM	ENSG00000255085.8	ENST00000528794.3	693	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTGGTGGTGTATG	144700522	True	NA	NA	False	ACTAAA	-14	NA	144700658	144707532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144700729_144706909
transcript_193412.known	chr8	-	2953	5	FSM	ENSG00000198169.9	ENST00000292562.12	2953	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	15.8804124631572	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTCTTTGGGCTTTGACA	-144755197	True	NA	-5	True	AATAAA	-20	NA	144755531	144720908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144723383_144753682_144753797_144754191_144754322_144754695_144754804_144755404
transcript_193414.known	chr8	-	618	4	FSM	ENSG00000198169.9	ENST00000525191.2	618	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	17.1464281994822	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTTTGGTGATTTAC	-144755107	True	NA	1	True	AATATA	-22	NA	144755441	144753453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144753797_144754191_144754322_144754695_144754804_144755404
transcript_193417.known	chr8	-	2342	2	FSM	ENSG00000198169.9	ENST00000530353.1	2342	2	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAATGGATGGGATGCTAA	-144756295	False	NA	NA	False	NA	NA	NA	144756417	144753680	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144753797_144754191
transcript_193420.known	chr8	-	1901	6	FSM	ENSG00000196378.13	ENST00000343459.8	1901	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	34.3546212320846	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGCATGTTCATTTTAG	-144787283	False	2180	-1	True	ATTAAA	-25	NA	144787304	144773113	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144774606_144777457_144777578_144778037_144778165_144778438_144778526_144780231_144780281_144787278
transcript_193422.known	chr8	-	965	6	FSM	ENSG00000161016.18	ENST00000394920.6	965	6	0	0	0	0	multi-exon	FALSE	canonical	3	1447	junction_5	12049.3929042089	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTGTGCCCACCCCCA	-144615242	True	NA	-19	True	AATAAA	-17	NA	144792389	144789768	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144789963_144790354_144790471_144791276_144791496_144791772_144791915_144791991_144792141_144792244
transcript_193428.known	chr8	-	1070	5	FSM	ENSG00000161016.18	ENST00000528957.6	1070	5	0	0	0	0	multi-exon	FALSE	canonical	3	17173	junction_2	9176.78943040539	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTGTGCCCACCCCCA	-144615243	True	NA	-19	True	AATAAA	-17	NA	144792390	144789768	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144789963_144790354_144790471_144791276_144791496_144791772_144791915_144791991
transcript_193429.known	chr8	-	556	4	FSM	ENSG00000161016.18	ENST00000529163.5	556	4	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_3	15978.8128539708	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTGCCCACCCCCATG	-144615243	True	NA	-17	True	AATAAA	-19	NA	144792390	144789766	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144789963_144790354_144790471_144791276_144791496_144792365
transcript_193430.known	chr8	-	717	4	FSM	ENSG00000161016.18	ENST00000526668.5	717	4	0	0	0	0	multi-exon	FALSE	canonical	3	17173	junction_2	10267.8600280465	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGTGCCCACCCCCAT	-144791914	False	NA	-18	True	AATAAA	-18	NA	144791959	144789767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144789963_144790354_144790471_144791276_144791496_144791772
transcript_193431.known	chr8	-	540	5	FSM	ENSG00000161016.18	ENST00000528296.5	540	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	13943.9055594191	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTGTGCCCACCCCCA	-144792080	False	NA	-19	True	AATAAA	-17	NA	144792125	144789768	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144789963_144790354_144790471_144791276_144791308_144791849_144791915_144791991
transcript_193434.known	chr8	+	3238	5	FSM	ENSG00000197363.11	ENST00000359971.4	3238	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.24037034920393	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTGGTTTTGTCTCTCTA	144798387	True	NA	10	True	AATAAA	-22	NA	144798912	144810084	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144798938_144802869_144802948_144803640_144803768_144804124_144804239_144807190
transcript_193435.known	chr8	+	456	5	FSM	ENSG00000197363.11	ENST00000528012.5	456	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.77263412660235	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCGGTCCTGAGGACGG	144798391	True	NA	NA	False	NA	NA	NA	144798916	144807327	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144798938_144802869_144802948_144803640_144803768_144804145_144804239_144807190
transcript_193441.nnic	chr8	+	2289	5	NNC	ENSG00000147789.16	novel	2794	5	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	35.1736762366404	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTATTTTATATGGAATCG	144824883	True	NA	20	True	AATAAA	-17	NA	144827560	144843220	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_144827610_144829042_144829091_144829395_144829605_144837390_144837508_144841354
transcript_193443.known	chr8	+	546	5	FSM	ENSG00000147789.16	ENST00000529767.5	546	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	35.5457451743524	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCTGAAAGTGACAGGCTT	144824899	True	NA	NA	False	NA	NA	NA	144827576	144841524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144827610_144829042_144829091_144829426_144829605_144837390_144837508_144841354
transcript_193445.known	chr8	+	2738	5	FSM	ENSG00000147789.16	ENST00000527218.6	2738	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	33.176610737084	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTGAGTAGGTTAAAATAA	144824901	True	NA	89	True	NA	NA	NA	144827578	144843772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144827610_144829042_144829091_144829477_144829605_144837393_144837508_144841354
transcript_193448.nnic	chr8	+	2421	5	NNC	ENSG00000147789.16	novel	2760	5	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	35.9191801131373	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTATTTTATATGGAATCG	144824805	True	NA	20	True	AATAAA	-17	NA	144827482	144843220	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_+_144827610_144829042_144829227_144829477_144829605_144837390_144837508_144841354
transcript_193452.known	chr8	+	2125	4	FSM	ENSG00000147789.16	ENST00000544249.2	2125	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	36.8510515453766	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTATATGGAATCGTT	144824840	True	NA	22	True	AATAAA	-19	NA	144827517	144843222	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144827610_144829042_144829091_144837390_144837508_144841354
transcript_193454.known	chr8	+	855	4	FSM	ENSG00000147789.16	ENST00000532382.5	855	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	20.8859335970941	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTTTCTGATTCTGAGG	144824877	True	NA	NA	False	NA	NA	NA	144827554	144841475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144827610_144829042_144829605_144837390_144837508_144841354
transcript_193459.nic	chr8	+	2198	3	ISM	ENSG00000147789.16	ENST00000532382.5	855	4	-9	2513	-9	114	5prime_fragment	FALSE	canonical	3	45	junction_1	14.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGGCTGTGATCTTACT	144824868	True	NA	NA	False	NA	NA	NA	144827545	144838962	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_144827610_144829042_144829605_144837390
transcript_193460.known	chr8	+	569	3	FSM	ENSG00000147789.16	ENST00000532393.1	569	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	43.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAGAATGCCAAAAAAAGTT	144824905	True	NA	NA	False	AATACA	-19	NA	144827582	144841782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144827610_144837393_144837508_144841354
transcript_193467.known	chr8	-	1305	2	FSM	ENSG00000170619.10	ENST00000402718.4	1305	2	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGATGGCGTGTGATGCAG	-144850459	True	NA	-4	True	AATAAA	-30	NA	144853067	144850165	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144851396_144852992
transcript_193468.known	chr8	-	848	2	FSM	ENSG00000170619.10	ENST00000533270.1	848	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGCCGAGCGTCCTGAT	-144850395	True	NA	NA	False	NA	NA	NA	144853003	144850825	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144851396_144852725
transcript_193469.known	chr8	-	1430	2	FSM	ENSG00000170619.10	ENST00000305103.4	1430	2	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTCATCAGAGGATGGCG	-144850440	True	NA	-14	True	AATAAA	-20	NA	144853048	144850175	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144851396_144852838
transcript_193470.known	chr8	-	849	2	FSM	ENSG00000170619.10	ENST00000529143.1	849	2	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCCGAGCGTCCTGATG	-144852636	False	2608	NA	False	NA	NA	NA	144852657	144850824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144851396_144852379
transcript_193474.known	chr8	+	1906	5	FSM	ENSG00000147789.16	ENST00000325217.10	1906	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	28.6792607994	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGAATTGCTTTTTATC	144824882	True	NA	8	True	AATAAA	-18	NA	144827559	144847509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_144827610_144829042_144829091_144829444_144829605_144837390_144837508_144845978
transcript_193476.known	chr8	-	592	7	FSM	ENSG00000196150.14	ENST00000525694.5	592	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	31.8468557666565	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAAACACCCTTGGGGAG	-144899300	True	NA	NA	False	NA	NA	NA	144901423	144882759	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144882837_144886839_144886903_144889580_144889695_144889932_144890060_144890307_144890404_144895142_144895233_144901398
transcript_193477.known	chr8	-	6337	6	FSM	ENSG00000196150.14	ENST00000417550.7	6337	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	16.4365446490435	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTATTTGCAGTGAAGAA	-144899330	True	NA	NA	False	AATAAA	-17	NA	144901453	144876954	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144882837_144886839_144886903_144889580_144889695_144889932_144890060_144890307_144890404_144901398
transcript_193479.known	chr8	-	6364	6	FSM	ENSG00000196150.14	ENST00000292579.11	6364	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	17.0950285170865	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTGCAGTGAAGAAAGAT	-144899338	True	NA	NA	False	AATAAA	-21	NA	144901461	144876950	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144882837_144886839_144886903_144889580_144889695_144889932_144890075_144890307_144890404_144901398
transcript_193480.known	chr8	-	672	6	FSM	ENSG00000196150.14	ENST00000533622.5	672	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	24.8467301671669	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGCATGCCACTCACTCC	-144899303	True	NA	NA	False	NA	NA	NA	144901426	144882654	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144882837_144886839_144886903_144889580_144889695_144889932_144890060_144890307_144890404_144901336
transcript_193488.known	chr8	-	593	5	FSM	ENSG00000196150.14	ENST00000533221.5	593	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	27.9049726751344	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACATGTGTGTTGAGTGT	-144899300	True	NA	NA	False	NA	NA	NA	144901423	144882605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144882837_144889580_144889695_144889932_144890060_144890307_144890404_144901398
transcript_193496.nnic	chr8	-	1631	5	NNC	ENSG00000196150.14	novel	6337	6	NA	NA	4	3093	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	25.5770893574699	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTGTTTCCTTTTATT	-144899352	True	NA	-2	True	ATTAAA	-18	NA	144901475	144886593	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr8_-_144887811_144889580_144889695_144889932_144890060_144890307_144890404_144901398
transcript_193501.known	chr8	-	575	3	FSM	ENSG00000170631.15	ENST00000527811.5	575	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	25.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGCCACAGTCCCTCTC	-144949550	False	1045	NA	False	NA	NA	NA	144950595	144932414	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144932591_144946010_144946216_144950401
transcript_193502.known	chr8	-	696	3	FSM	ENSG00000170631.15	ENST00000532351.5	696	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	4	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTTATTCAGCGTCAA	-144949774	True	NA	NA	False	NA	NA	NA	144950819	144932122	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144932591_144946010_144946216_144950796
transcript_193503.known	chr8	-	568	3	FSM	ENSG00000170631.15	ENST00000527512.5	568	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	19	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCCTCTCCCAGGAGGGG	-144949830	True	NA	NA	False	NA	NA	NA	144950875	144932404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144932591_144945912_144946216_144950796
transcript_193504.known	chr8	-	876	5	FSM	ENSG00000196922.11	ENST00000690545.1	2085	5	9	1200	0	-385	multi-exon	FALSE	canonical	3	14	junction_2	5.43139024560011	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGAAAGAGCCTATCAGA	-145001757	True	NA	NA	False	NA	NA	NA	145002895	144978138	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144978554_144994478_144994593_144996506_144996608_144999602_144999770_145002816
transcript_193508.known	chr8	-	1112	3	FSM	ENSG00000196922.11	ENST00000534037.7	1136	3	20	4	6	-4	multi-exon	FALSE	canonical	3	14	junction_1	3.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGTTGGGTGTAGGT	-145001737	True	NA	NA	False	ATTAAA	-14	NA	145002875	144995721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_-_144996608_144999602_144999770_145002816
transcript_193509.known	chr8	+	2588	5	FSM	ENSG00000182307.14	ENST00000331434.7	2588	5	0	0	0	0	multi-exon	FALSE	canonical	1	182	junction_2	190.129561089274	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTCTTGTGTCTTT	145042794	True	NA	18	True	NA	NA	NA	145052466	145056030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_145052498_145052585_145052898_145053061_145053147_145053296_145053444_145054017
transcript_193514.nic	chr8	+	330	2	ISM	ENSG00000182307.14	ENST00000331434.7	2588	5	-76	3222	-74	-629	5prime_fragment	FALSE	canonical	3	271	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCGGAACAGGGCCTCTGTG	145042718	True	NA	NA	False	AAGAAA	-2	NA	145052390	145052808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr8_+_145052498_145052585
transcript_193515.known	chr8	+	2676	4	FSM	ENSG00000182307.14	ENST00000530455.5	2676	4	0	0	0	0	multi-exon	FALSE	canonical	1	182	junction_1	197.924227925739	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTCTTGTGTCTTT	145042794	True	NA	18	True	NA	NA	NA	145052466	145056030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr8_+_145052898_145053061_145053147_145053296_145053444_145054017
transcript_193524.known	chr9	-	1771	16	FSM	ENSG00000172785.18	ENST00000314367.14	1771	16	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_15	533.237591406391	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGTTATGACTGTTATT	NA	False	NA	NA	False	ATTAAA	-44	NA	179047	121059	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_121574_121960_122091_123216_123283_123385_123455_134978_135031_146101_146159_152033_152079_154708_154796_156480_156528_162431_162470_163977_164038_172080_172173_173269_173367_175697_175785_177722_177821_178815
transcript_193527.known	chr9	-	1792	15	FSM	ENSG00000172785.18	ENST00000377400.8	1792	15	0	0	0	0	multi-exon	FALSE	canonical	3	515	junction_8	468.051829722011	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTTGATGTTGACGACC	NA	False	NA	NA	False	AATAAA	-17	NA	179147	121040	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_121574_121960_122091_123216_123283_123385_123455_134978_135031_146101_146159_152033_152079_154708_154796_156480_156528_162431_162470_163977_164038_172080_172173_173269_173367_175697_175785_178815
transcript_193531.known	chr9	-	1241	14	FSM	ENSG00000172785.18	ENST00000382447.8	1241	14	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_5	567.388401038597	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCAAGCATTTATTTAT	-173519	True	NA	-6	True	AATAAA	-20	NA	179021	121408	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_121574_121960_122091_123216_123283_123385_123455_134978_135031_152033_152079_154708_154796_156480_156528_162431_162470_163977_164038_172080_172173_173269_173367_175697_175785_178815
transcript_193534.known	chr9	-	1807	4	FSM	ENSG00000172785.18	ENST00000382389.5	1807	4	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_3	703.347393224398	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGGAAAAGTACTCGG	-173521	True	NA	NA	False	ATTAAA	-39	NA	179023	171952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_173367_175697_175785_177722_177821_178815
transcript_193535.known	chr9	-	1731	3	FSM	ENSG00000172785.18	ENST00000382393.2	1731	3	0	0	0	0	multi-exon	FALSE	canonical	3	1761	junction_1	2	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGGAAAAGTACTCGG	NA	False	NA	NA	False	ATTAAA	-39	NA	179045	171952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_173367_175697_175785_178815
transcript_193537.known	chr9	+	5348	14	FSM	ENSG00000107104.21	ENST00000674102.1	5348	14	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_3	59.5405485621095	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCCCTGTTTCAT	502498	True	NA	14	True	AATAAA	-16	NA	504694	746103	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_504755_539515_539634_540507_540668_676889_677010_710803_713465_730050_730249_731157_731267_732377_732618_734747_734836_738284_738505_740791_740935_742204_742406_744490_744590_745172
transcript_193541.known	chr9	+	5070	12	FSM	ENSG00000107104.21	ENST00000382297.7	5070	12	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	23.5810541686007	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCCCTGTTTCAT	502498	True	NA	14	True	AATAAA	-16	NA	504694	746103	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_504755_676889_677010_710803_713465_730050_730249_731157_731267_732377_732618_734747_734836_738284_738505_740791_740935_742204_742406_744490_744590_745172
transcript_193545.known	chr9	+	5249	11	FSM	ENSG00000107104.21	ENST00000382293.7	5249	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	46.7552136130293	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCCCTGTTTCAT	706795	False	NA	14	True	AATAAA	-16	NA	706888	746103	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_707248_710803_713465_730050_730249_731157_731267_732377_732618_734747_734836_738284_738505_740791_740935_742204_742406_744490_744590_745172
transcript_193558.known	chr9	+	2215	5	FSM	ENSG00000137090.12	ENST00000382276.8	2215	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGTGTGTATATTTG	NA	False	NA	NA	False	AATAAA	-20	NA	841696	969090	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_842193_846959_847144_893911_894196_916762_916908_967984
transcript_193563.nic	chr9	-	1114	4	FSM	ENSG00000236404.12	ENST00000691704.1	806	4	-308	0	-308	0	multi-exon	FALSE	canonical	3	57	junction_3	15.7480157480236	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGATTTCCTTATCTTC	-2621697	False	NA	0	True	AATAAA	-25	NA	2621729	2535651	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_2536016_2536358_2536454_2539398_2539553_2621228
transcript_193565.known	chr9	-	887	4	FSM	ENSG00000236404.12	ENST00000453601.5	887	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	32.124756808418	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGATTTCCTTATCTTC	-2622341	False	NA	0	True	AATAAA	-25	NA	2622373	2535651	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_2536016_2536358_2536454_2539398_2539553_2622099
transcript_193566.known	chr9	+	9213	19	FSM	ENSG00000147852.17	ENST00000382100.8	9213	19	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_16	46.2856135823147	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGAGCCTTTCCTTTCTC	2620746	True	NA	NA	False	AATAAA	-19	NA	2621786	2660056	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_2622272_2635452_2635573_2639858_2639982_2641376_2641500_2643159_2643532_2643627_2643751_2643836_2643960_2644733_2644854_2644956_2645083_2645573_2645746_2646333_2646553_2647473_2647593_2648207_2648348_2648668_2648811_2650369_2650517_2651414_2651499_2651873_2651955_2652779_2652950_2653832
transcript_193568.known	chr9	+	5723	18	FSM	ENSG00000147852.17	ENST00000681306.1	5723	18	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_6	21.126902772561	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAGTTCTTGATGAATA	2622023	False	NA	NA	False	TTTAAA	-18	NA	2622052	2656916	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_2622272_2635452_2635573_2639858_2639982_2641376_2641500_2643159_2643532_2643627_2643751_2643836_2643960_2644733_2644854_2644956_2645083_2645573_2645746_2646333_2646553_2647473_2647593_2648207_2648348_2648668_2648811_2650369_2650517_2651873_2651955_2652779_2652950_2653832
transcript_193570.known	chr9	+	3239	18	FSM	ENSG00000147852.17	ENST00000681806.1	3239	18	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_10	42.6959962629497	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGCCTGTTCCTCTAG	2622011	False	NA	15	True	ATTAAA	-19	NA	2622040	2654485	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_2622272_2635452_2635573_2639858_2639982_2641376_2641500_2643159_2643532_2643627_2643751_2643836_2643960_2644733_2644854_2644956_2645083_2645573_2645746_2646398_2646553_2647473_2647593_2648207_2648348_2648668_2648811_2650369_2650517_2651873_2651955_2652779_2652950_2653832
transcript_193582.known	chr9	-	2187	18	FSM	ENSG00000080608.10	ENST00000397885.3	2187	18	0	0	0	0	multi-exon	FALSE	canonical	3	790	junction_9	49.1366993693461	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCAGCTGTCTCCTCTGTT	-2821136	True	NA	-4	True	TATAAA	-30	NA	2844095	2804151	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_2804464_2807813_2807905_2810343_2810432_2811360_2811584_2812219_2812363_2820017_2820099_2823780_2823835_2824716_2824816_2827072_2827152_2828674_2828779_2829773_2829949_2830961_2831029_2831250_2831345_2833356_2833433_2834030_2834167_2837179_2837402_2838425_2838518_2844044
transcript_193589.nic	chr9	-	1796	16	ISM	ENSG00000080608.10	ENST00000397885.3	2187	18	-35	6215	-35	-6200	5prime_fragment	FALSE	canonical	3	790	junction_7	52.1291558428572	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGAAAGAAAATGGGAGAG	-2844076	False	NA	NA	False	GATAAA	-3	NA	2844130	2810366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_2810432_2811360_2811584_2812219_2812363_2820017_2820099_2823780_2823835_2824716_2824816_2827072_2827152_2828674_2828779_2829773_2829949_2830961_2831029_2831250_2831345_2833356_2833433_2834030_2834167_2837179_2837402_2838425_2838518_2844044
transcript_193599.nic	chr9	-	724	5	ISM	ENSG00000080608.10	ENST00000397885.3	2187	18	-200	29258	-200	-4935	5prime_fragment	FALSE	canonical	3	795	junction_4	47.3728561520202	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTAAAGTTAATGAGTGAT	NA	False	NA	NA	False	AAGAAA	-4	NA	2844295	2833409	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_2833433_2834030_2834167_2837179_2837402_2838425_2838518_2844044
transcript_1936.known	chr1	-	2279	3	FSM	ENSG00000116251.11	ENST00000480661.1	2279	3	0	0	0	0	multi-exon	FALSE	canonical	3	6384	junction_2	127	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATTGGAAATCATAGTC	-6124092	True	NA	NA	False	NA	NA	NA	6199563	6186574	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6186817_6192929_6193055_6197651
transcript_193601.nic	chr9	-	530	4	ISM	ENSG00000080608.10	ENST00000397885.3	2187	18	-30	29880	-30	-5557	5prime_fragment	FALSE	canonical	3	795	junction_3	51.2336694849089	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAATTCTACCTAAAGATG	-2821166	True	NA	-1	True	NA	NA	NA	2844125	2834031	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_2834167_2837179_2837402_2838425_2838518_2844044
transcript_193602.nic	chr9	-	615	4	ISM	ENSG00000080608.10	ENST00000397885.3	2187	18	-200	29965	-200	-5642	5prime_fragment	FALSE	canonical	3	795	junction_3	51.2336694849089	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACTGAAGCAAAGCAGACA	NA	False	NA	-86	True	AAAAAG	-10	NA	2844295	2834116	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_2834167_2837179_2837402_2838425_2838518_2844044
transcript_193605.known	chr9	-	9258	17	FSM	ENSG00000080298.16	ENST00000617270.5	9258	17	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_16	4.11504480534538	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGAAATGGCTTGGGTT	-3525975	False	NA	NA	False	AATAAA	-22	NA	3526001	3218296	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_3225281_3228846_3228890_3248031_3248186_3256990_3257200_3262934_3263085_3266207_3266306_3270370_3270526_3271002_3271119_3275499_3275613_3277339_3277462_3288130_3288251_3293076_3293259_3301545_3301621_3330258_3330518_3346666_3346765_3395471_3395597_3525746
transcript_193613.known	chr9	+	3698	12	FSM	ENSG00000106688.12	ENST00000262352.8	3698	12	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_7	7.18929415264274	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGCCTTTTTCTTCTTG	4489701	True	NA	4	True	AATAAA	-19	NA	4490467	4587469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_4490771_4544566_4544708_4561448_4561542_4564343_4564459_4566046_4566090_4567668_4567768_4572203_4572389_4573906_4574015_4576000_4576124_4576568_4576764_4583037_4583173_4585311
transcript_193618.known	chr9	+	2965	1	FSM	ENSG00000205808.7	ENST00000381883.5	2965	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGTGAGATGAAAACTTG	4661133	True	NA	14	True	AATAAA	-20	NA	4662293	4665258	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_4662300_4665300
transcript_193620.known	chr9	-	463	2	FSM	ENSG00000273061.2	ENST00000607997.1	463	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTCCATGTGTTTAGA	-4679318	True	NA	NA	False	AATAAA	-16	NA	4679502	4678818	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_4679166_4679386
transcript_193621.known	chr9	+	3500	7	FSM	ENSG00000106993.12	ENST00000381854.4	3500	7	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_2	18.3484785926972	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGTCCATTTATTCTCT	4675693	True	NA	5	True	AATAAA	-18	NA	4679568	4708399	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_4679900_4684876_4685159_4688512_4688607_4697095_4697212_4697756_4697880_4701863_4702029_4706010
transcript_193627.known	chr9	+	784	2	FSM	ENSG00000106993.12	ENST00000479095.1	784	2	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCCTCCACATATATTT	4675839	True	NA	NA	False	AATATA	-14	NA	4679714	4685475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_4679900_4684876
transcript_193635.nnic	chr9	-	3019	6	NNC	ENSG00000147853.17	novel	4219	5	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	99.160475997244	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGTGGCACTATGTAAATA	-4739015	True	NA	95	True	AATAAA	-22	NA	4741228	4712044	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_4713097_4718418_4718538_4719134_4719308_4722505_4722626_4726082_4727346_4740936
transcript_193636.nnic	chr9	-	3689	6	NNC	ENSG00000147853.17	novel	4219	5	NA	NA	-92	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_5	93.2853686276685	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGTGGCACTATGTAAATA	-4741299	False	NA	95	True	AATAAA	-22	NA	4741319	4712044	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_4713097_4718418_4718538_4719134_4719308_4722505_4722626_4726082_4727925_4740936
transcript_193637.known	chr9	-	4219	5	FSM	ENSG00000147853.17	ENST00000381809.8	4219	5	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_4	32.8176781628439	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCCAGCACTGTGTCAT	-4738989	True	NA	-2	True	AATAAA	-21	NA	4741202	4709555	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_4713097_4718418_4718538_4719134_4719308_4722505_4722626_4740936
transcript_193640.known	chr9	-	705	4	FSM	ENSG00000147853.17	ENST00000447596.4	705	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	110.460651616562	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAATGTGTGTAACTATT	-4739014	True	NA	NA	False	ACTAAA	-41	NA	4741227	4712974	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_4713097_4718418_4718538_4719134_4719308_4740936
transcript_193645.known	chr9	+	2061	9	FSM	ENSG00000120158.12	ENST00000381750.9	2061	9	0	0	0	0	multi-exon	TRUE	canonical	3	96	junction_1	16.4083629591742	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAAGTGTAATAAGTGTAA	4790234	True	NA	75	True	ATTAAA	-17	NA	4792943	4861066	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_4793228_4823547_4823620_4826857_4827034_4833153_4833229_4834140_4834266_4841231_4841358_4844524_4844682_4849446_4849551_4860124
transcript_193647.known	chr9	+	1644	8	FSM	ENSG00000120158.12	ENST00000442869.5	1644	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	41.9411638428143	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTTATATGTGAGGGAT	4790270	True	NA	NA	False	NA	NA	NA	4792979	4860861	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_4793228_4823547_4823620_4833153_4833229_4834140_4834266_4841231_4841358_4844524_4844682_4849446_4849551_4860124
transcript_193648.known	chr9	+	804	3	FSM	ENSG00000120158.12	ENST00000381732.3	804	3	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	8	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGAGTGGAGTTTTTGTA	4790266	True	NA	NA	False	NA	NA	NA	4792975	4827337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_4793228_4823547_4823620_4826857
transcript_193649.known	chr9	+	7023	25	FSM	ENSG00000096968.14	ENST00000381652.4	7023	25	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	4.59600520984136	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTCAGTTGTGTTTAT	4985216	True	NA	NA	False	AATAAA	-21	NA	4985271	5129948	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_4985631_4985939_4986023_5021962_5022214_5029782_5029907_5044402_5044521_5050685_5050832_5054562_5054885_5055668_5055789_5064882_5065041_5066677_5066790_5069021_5069209_5069924_5070053_5072491_5072627_5073697_5073786_5077452_5077581_5078305_5078445_5080228_5080381_5080532_5080684_5081724_5081862_5089673_5089864_5090445_5090571_5090738_5090912_5123003_5123122_5126332_5126447_5126683
transcript_193655.nic	chr9	-	727	2	ISM	ENSG00000107014.9	ENST00000416837.1	733	3	179	0	179	0	3prime_fragment	FALSE	canonical	3	59	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCTGAAAAGCCTTTTT	NA	False	NA	-12	True	ATTAAA	-11	NA	5304253	5299875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_5300445_5304095
transcript_193656.known	chr9	-	764	2	FSM	ENSG00000107018.8	ENST00000487557.2	764	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACCATACATAATAACAATA	-5339379	True	NA	NA	False	AATAAA	-15	NA	5339396	5334968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_5335598_5339261
transcript_193663.nic	chr9	-	1102	6	NIC	ENSG00000107020.10	novel	981	6	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_5	160.232830593484	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATGCCCAGCTGCTCTC	-5435051	True	NA	-2	True	AATAAA	-20	NA	5437889	5357970	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_5358361_5361077_5361188_5361757_5361889_5431896_5431984_5436568_5436695_5437631
transcript_193664.known	chr9	-	981	6	FSM	ENSG00000107020.10	ENST00000223864.7	981	6	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_3	41.5384159543909	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATGCCCAGCTGCTCTC	-5435087	True	NA	-2	True	AATAAA	-20	NA	5437925	5357970	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_5358361_5361077_5361188_5361757_5361889_5431896_5431984_5436568_5436695_5437788
transcript_193670.nnic	chr9	-	944	5	NIC	ENSG00000107020.10	novel	981	6	NA	NA	-50	0	combination_of_known_splicesites	FALSE	canonical	3	98	junction_3	144.710918731103	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATGCCCAGCTGCTCTC	-5435137	True	NA	-2	True	AATAAA	-20	NA	5437975	5357970	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_5358361_5361077_5361188_5361757_5361889_5436568_5436695_5437788
transcript_193676.known	chr9	+	6786	26	FSM	ENSG00000107036.12	ENST00000414202.7	6786	26	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_3	10.178722906141	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTTTATTCATCATCT	5627910	True	NA	76	True	AATAAA	-14	NA	5629106	5776557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_5629454_5656582_5656691_5689958_5690039_5713895_5714004_5720181_5720325_5720613_5720751_5732387_5732480_5738449_5738539_5742868_5743014_5743688_5743738_5745930_5746084_5747301_5747506_5753199_5753239_5753535_5753647_5754840_5754931_5756211_5756373_5757312_5757452_5762540_5762661_5763139_5763869_5765413_5765573_5765661_5765799_5768969_5769257_5770086_5770279_5772563_5772742_5772891_5773081_5773957
transcript_193683.known	chr9	-	5377	15	FSM	ENSG00000099219.15	ENST00000339450.10	5377	15	0	0	0	0	multi-exon	TRUE	canonical	3	137	junction_5	41.5105101026185	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGGTATCTTTTTAAC	-5830493	True	NA	-28	True	AATAAA	-13	NA	5833117	5784571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_5787309_5787429_5787594_5797816_5797933_5798805_5799009_5801175_5801329_5805026_5805218_5805610_5805786_5810010_5810232_5811110_5811324_5812124_5812218_5812888_5813036_5823895_5824002_5825091_5825220_5830726_5831029_5832689
transcript_19369.known	chr1	+	3572	6	FSM	ENSG00000143494.16	ENST00000366965.6	3572	6	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_3	560.49813559012	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAACAAAACAAAACAA	212922179	True	NA	73	True	TTTAAA	-4	NA	212950634	212990910	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_212950741_212951338_212951819_212961165_212961255_212972579_212972962_212973954_212974071_212988511
transcript_193694.nnic	chr9	-	5014	13	FSM	ENSG00000099219.15	ENST00000691251.1	5000	13	-3	-11	-3	0	multi-exon	FALSE	canonical	3	59	junction_5	59.7645844589884	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGGTATCTTTTTAAC	-5830496	True	NA	-28	True	AATAAA	-13	NA	5833120	5784571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_5787309_5787429_5787594_5797816_5797933_5798805_5799009_5801175_5801329_5810010_5810232_5811110_5811324_5812124_5812218_5812888_5813036_5823895_5824002_5825091_5825220_5830726_5831029_5832689
transcript_193697.known	chr9	-	1000	2	FSM	ENSG00000137040.10	ENST00000485372.1	1000	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGTGGAATATACAGAACAA	-6013417	True	NA	NA	False	NA	NA	NA	6015612	6013497	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_6014357_6015471
transcript_193698.known	chr9	-	4600	1	FSM	ENSG00000137040.10	ENST00000259569.6	4600	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTATTGTGTCTGGAACT	-6013429	True	NA	-5	True	AATAAA	-31	NA	6015624	6011024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_6011000_6015600
transcript_193704.known	chr9	+	3576	16	FSM	ENSG00000147854.17	ENST00000276893.10	3576	16	0	0	0	0	multi-exon	TRUE	canonical	3	48	junction_4	10.7732178211629	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCATTTTGCTTTACTT	6411124	True	NA	15	True	AATAAA	-20	NA	6413198	6507054	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_6413644_6420911_6421143_6433913_6434174_6460572_6460792_6475390_6475501_6477621_6477809_6481642_6481767_6481991_6482100_6486820_6486926_6493825_6493933_6497197_6497361_6498017_6498159_6499834_6499932_6500551_6500710_6504592_6504692_6506032
transcript_193709.known	chr9	+	802	3	FSM	ENSG00000147854.17	ENST00000381373.3	802	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	25	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGAATGGCAGTTTTGCTTT	6413389	False	NA	NA	False	AATAAA	-15	NA	6413417	6422979	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_6413644_6420911_6421143_6422634
transcript_193710.known	chr9	+	2859	4	FSM	ENSG00000147854.17	ENST00000492853.1	2859	4	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	2.62466929133727	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCATTTTGCTTTACTT	NA	False	NA	15	True	AATAAA	-20	NA	6498351	6507054	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_6499932_6500551_6500710_6504592_6504692_6506032
transcript_193722.nnic	chr9	-	3736	26	NNC	ENSG00000178445.10	novel	3843	25	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	319.387604017438	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAATGCCTTTCTCTTGGT	-6630016	True	NA	-3	True	AATAAA	-15	NA	6645709	6532468	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_6533161_6534707_6534789_6536063_6536237_6540050_6540147_6550802_6550915_6553367_6553510_6554668_6554782_6556152_6556303_6558558_6558685_6565353_6565430_6587140_6587284_6588400_6588443_6588617_6588703_6589194_6589293_6592142_6592224_6592850_6592991_6595013_6595120_6602108_6602206_6604587_6604785_6605130_6605279_6606591_6606670_6610191_6610357_6620183_6620320_6644613_6644693_6645244_6645466_6645550
transcript_193726.known	chr9	-	3843	25	FSM	ENSG00000178445.10	ENST00000321612.8	3843	25	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	245.695833721969	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGCCTTTCTCTTGGTGT	NA	False	NA	-1	True	AATAAA	-17	NA	6645729	6532466	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_6533161_6534707_6534789_6536063_6536237_6540050_6540147_6550802_6550915_6553367_6553510_6554668_6554782_6556152_6556303_6558558_6558685_6565353_6565430_6587140_6587284_6588400_6588443_6588617_6588703_6589194_6589293_6592142_6592224_6592850_6592991_6595013_6595120_6602108_6602206_6604587_6604785_6605130_6605279_6606591_6606670_6610191_6610357_6620183_6620320_6644613_6644693_6645244
transcript_193744.known	chr9	-	1796	10	FSM	ENSG00000178445.10	ENST00000638661.1	1796	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	380.146463002529	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATTAGTATTCTAATAAA	NA	False	NA	-37	True	NA	NA	NA	6565498	6532502	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_6533161_6534707_6534789_6536063_6536237_6540050_6540147_6550802_6550915_6553367_6553510_6554668_6554782_6556152_6556303_6558558_6558685_6565353
transcript_193747.known	chr9	+	526	3	FSM	ENSG00000236924.2	ENST00000413145.2	906	3	135	245	81	-245	multi-exon	FALSE	canonical	3	66	junction_2	14.5	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTCTGTTTTGAAAC	6643659	True	NA	16	True	AATAAA	-16	NA	6645955	6670635	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_6646086_6669543_6669729_6670424
transcript_193751.known	chr9	+	511	3	FSM	ENSG00000229611.2	ENST00000664463.1	511	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTCATGGGTAATTTTTG	6704206	True	NA	NA	False	AATAAA	-16	NA	6704269	6707777	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_6704344_6704452_6704654_6707541
transcript_193754.nic	chr9	+	4711	23	NIC	ENSG00000107077.19	novel	4338	22	NA	NA	43	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_19	25.3106321369806	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTCTCTGACTTGCTT	6757362	True	NA	6	True	AATAAA	-18	NA	6757698	7175648	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_6758204_6792971_6793133_6805598_6805775_6814630_6814746_6849506_6849701_6880011_6880062_6887959_6888064_6893094_6893233_6980924_6981119_6984165_6984405_6986343_6986667_6990415_6990525_7011697_7011880_7013787_7014002_7015852_7015930_7046861_7046918_7049091_7049201_7103684_7103871_7105401_7105501_7128065_7128237_7165237_7165358_7169797_7169891_7174552
transcript_193756.known	chr9	+	4338	22	FSM	ENSG00000107077.19	ENST00000381309.8	4338	22	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_12	11.8300512838569	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTCTCTGACTTGCTT	6757926	True	NA	6	True	AATAAA	-18	NA	6757972	7175648	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_6758204_6792971_6793133_6805598_6805775_6814630_6814746_6849506_6849701_6880011_6880062_6887959_6888064_6893094_6893233_6980924_6981119_6984165_6984405_6986343_6986667_6990415_6990525_7011697_7011880_7013787_7014002_7015852_7015930_7046861_7046918_7049091_7049201_7103684_7103871_7128065_7128237_7165237_7165358_7169797_7169891_7174552
transcript_193758.known	chr9	+	4601	21	FSM	ENSG00000107077.19	ENST00000381306.7	4601	21	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_12	12.0536301585871	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGCAAAAAAAAACTCA	6757319	True	NA	NA	False	CATAAA	-43	NA	6757655	7170932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_6758204_6792971_6793133_6805598_6805775_6814630_6814746_6849506_6849701_6880011_6880062_6887959_6888064_6893094_6893233_6980924_6981119_6984165_6984405_6986343_6986667_6990415_6990525_7011697_7011880_7013787_7014002_7015852_7015930_7046861_7046918_7049091_7049201_7103684_7103871_7128065_7128237_7165237_7165358_7169797
transcript_193765.known	chr9	+	3332	18	FSM	ENSG00000107077.19	ENST00000543771.5	3332	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_17	24.6462866648666	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGATTAGTGCTTGTAA	6757896	True	NA	NA	False	ATTAAA	-18	NA	6758142	7077263	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_6758204_6792971_6793133_6805598_6805775_6814630_6814746_6849506_6849701_6880011_6880062_6887959_6888064_6893094_6893233_6980924_6981119_6984165_6984405_6986343_6986667_6990415_6990525_7011697_7011880_7013787_7014002_7015852_7015930_7046861_7046918_7049091_7049201_7076433
transcript_193771.known	chr9	+	1439	8	FSM	ENSG00000107077.19	ENST00000489243.5	1439	8	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	8.88015443881146	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTGTAGCAAGAGATGG	6757463	False	NA	NA	False	AAAACA	-27	NA	6758102	6893632	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_6758204_6792971_6793133_6805598_6805775_6814630_6814746_6849506_6849701_6880011_6880062_6887959_6888064_6893094
transcript_193773.known	chr9	+	1406	4	FSM	ENSG00000107077.19	ENST00000401787.7	1406	4	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	11.8977121983832	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTTATATTGTCCTTTT	6757317	True	NA	NA	False	ATTAAA	-18	NA	6757653	6815149	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_6758204_6792971_6793133_6805598_6805775_6814630
transcript_193774.known	chr9	+	1214	2	FSM	ENSG00000225489.8	ENST00000666851.1	1214	2	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAAGTTCAGGTGCAGTG	6716044	True	NA	NA	False	AAAACA	-15	NA	6716156	6718626	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_6716617_6717872
transcript_193778.known	chr9	-	2456	2	FSM	ENSG00000137038.8	ENST00000358227.5	2456	2	0	0	0	0	multi-exon	FALSE	canonical	3	1018	junction_1	0	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCCAAAGTGTGTTTGG	-7788888	True	NA	NA	False	AATAAA	-20	NA	7799778	7796499	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_7798638_7799460
transcript_193781.known	chr9	+	2683	2	FSM	ENSG00000153714.6	ENST00000319264.4	2683	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGCACTGATCTTTTC	12774970	True	NA	NA	False	ATTAAA	-16	NA	12775019	12823060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_12776028_12821385
transcript_193796.nnic	chr9	+	2685	3	Antisense	novelGene_ENSG00000285637.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	28	junction_1	11.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCAGTCTATTGATTGT	12947422	True	NA	2	True	AATAAA	-19	NA	12948721	12960744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr9_+_12948974_12950768_12950871_12958413
transcript_193801.known	chr9	-	6441	46	FSM	ENSG00000107186.17	ENST00000447879.6	6441	46	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_45	24.7043156123893	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGTAGGGGGGAAATAAC	-13276921	False	NA	NA	False	NA	NA	NA	13279564	13106859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_13107112_13108935_13109060_13109951_13110065_13110635_13110741_13112023_13112147_13113010_13113055_13113930_13114022_13115247_13115335_13119501_13119650_13121738_13121933_13122086_13122171_13123152_13123299_13125215_13125391_13126515_13126591_13126679_13126773_13133823_13133905_13136091_13136183_13136711_13136804_13137956_13138154_13139986_13140150_13147547_13147659_13150510_13150689_13158017_13158111_13162690_13162796_13168365_13168565_13175751_13175876_13176135_13176418_13183417_13183586_13186269_13186387_13188783_13188994_13190113_13190300_13192130_13192296_13193166_13193314_13196120_13196231_13205035_13205108_13205915_13206100_13216773_13216863_13217179_13217295_13219558_13219769_13221371_13221501_13222232_13222447_13223570_13223711_13224373_13224584_13247634_13247802_13250299_13250373_13279399
transcript_193807.known	chr9	-	7821	47	FSM	ENSG00000107186.17	ENST00000319217.12	7821	47	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_20	32.8292037103718	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCAGCAAGCATTTTTTT	-13277049	True	NA	-12	True	AATAAA	-25	NA	13279692	13105706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_13107112_13108935_13109060_13109951_13110065_13110635_13110741_13112023_13112147_13113010_13113055_13113930_13114022_13115247_13115335_13119501_13119650_13121738_13121933_13122086_13122171_13123152_13123299_13125215_13125391_13126515_13126591_13126679_13126773_13133823_13133905_13136091_13136183_13136711_13136804_13137956_13138154_13139986_13140150_13143465_13143565_13147547_13147659_13150510_13150689_13158017_13158111_13162690_13162796_13168365_13168565_13175751_13175876_13176135_13176418_13183417_13183586_13186269_13186387_13188783_13188994_13190113_13190300_13192130_13192296_13193166_13193314_13196120_13196231_13205035_13205108_13205915_13206100_13216773_13216863_13217179_13217295_13219558_13219769_13221371_13221501_13222232_13222447_13223570_13223711_13224373_13224584_13247634_13247802_13250299_13250373_13279399
transcript_193813.nnic	chr9	-	1626	11	NNC	ENSG00000107186.17	novel	7603	46	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_10	20.712556578076	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTAATCCTATGTTAAT	-13277019	True	NA	-4	True	NA	NA	NA	13279662	13205919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_13206100_13216773_13216863_13217179_13217295_13219558_13219769_13221371_13221501_13222232_13222447_13223570_13223711_13224373_13224584_13247634_13247802_13250299_13250373_13279563
transcript_193817.known	chr9	-	2869	12	FSM	ENSG00000147862.18	ENST00000397575.7	2869	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6.94250294255883	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAGGAAAAAAACAGT	-14313985	False	NA	NA	False	AAAAAG	-27	NA	14314069	14087571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_14088327_14102421_14102511_14112998_14113082_14116207_14116347_14120439_14120625_14125631_14125767_14146688_14146808_14150144_14150266_14155824_14155894_14179726_14179781_14306988_14307521_14313481
transcript_193820.known	chr9	-	3129	10	FSM	ENSG00000147862.18	ENST00000397579.6	3129	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	6.5734219812218	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAATGAAAAAAA	-14314498	False	NA	NA	False	NA	NA	NA	14314582	14087602	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_14088327_14102421_14102511_14120439_14120625_14125631_14125767_14146688_14146808_14150144_14150266_14155824_14155894_14179726_14179781_14306988_14307521_14313481
transcript_193822.known	chr9	-	8198	9	FSM	ENSG00000147862.18	ENST00000380959.7	8198	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	6.10327780786685	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCCTCATGTTTTATT	-14313901	False	NA	-1	True	AATAAA	-18	NA	14313985	14081847	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_14088327_14120439_14120625_14125631_14125767_14146688_14146808_14150144_14150266_14155824_14155894_14179726_14179781_14306988_14307521_14313481
transcript_193830.known	chr9	-	9121	10	FSM	ENSG00000175893.12	ENST00000380916.9	9121	10	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	13.5646599662505	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGTTTTTATCCTCTTA	-14693319	False	NA	0	True	AATAAA	-18	NA	14693432	14611070	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_14619099_14619638_14619683_14639895_14640013_14658748_14658888_14662214_14662327_14672829_14672929_14674186_14674386_14680032_14680163_14690336_14690386_14693228
transcript_193832.known	chr9	-	1231	2	FSM	ENSG00000147869.5	ENST00000380911.4	1231	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATAAGCGAGACCATAAA	-14722391	True	NA	NA	False	NA	NA	NA	14722733	14719723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_14720387_14722165
transcript_193834.known	chr9	-	10483	20	FSM	ENSG00000155158.20	ENST00000512701.6	10483	20	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	6.03360854986168	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGTCTTATTCTGGTTG	NA	False	NA	-10	True	AATAAA	-16	NA	15307360	15163621	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_15172110_15175018_15175136_15177696_15177815_15182306_15182416_15185279_15185407_15186943_15187036_15187970_15188133_15189573_15189634_15189724_15189793_15190553_15190663_15191189_15191256_15192589_15192696_15199860_15199926_15203822_15203891_15210087_15210165_15211265_15211398_15214138_15214250_15225916_15226013_15267913_15267949_15307083
transcript_193839.known	chr9	-	3364	16	FSM	ENSG00000164985.15	ENST00000380738.8	3364	16	0	0	0	0	multi-exon	FALSE	canonical	3	1204	junction_15	303.350329194188	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGCTAGTAAATTACTTT	-15477291	True	NA	-38	True	ATTAAA	-17	NA	15510995	15464065	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_15465581_15466747_15466860_15468629_15468844_15468956_15469059_15469265_15469337_15469937_15469994_15472631_15472751_15474008_15474238_15478476_15478553_15479590_15479688_15486005_15486069_15486826_15486932_15489985_15490125_15506560_15506638_15510116_15510327_15510816
transcript_193845.known	chr9	-	1889	11	FSM	ENSG00000164985.15	ENST00000380716.8	1889	11	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_1	648.598828244393	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATTTTTAGATATTTTT	-15477290	True	NA	-4	True	AATAAA	-20	NA	15510994	15470635	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_15471232_15472631_15472751_15474008_15474238_15478476_15478553_15479590_15479688_15486005_15486069_15486826_15486932_15489985_15490125_15506560_15506638_15510116_15510327_15510816
transcript_193848.known	chr9	+	2524	10	FSM	ENSG00000164975.16	ENST00000490969.5	2524	10	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_9	74.8242384970717	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTTTCTCTTTTTTCGA	15415733	True	NA	9	True	TATAAA	-16	NA	15422868	15462460	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_15423194_15423908_15423987_15433551_15433637_15444601_15444707_15447094_15447245_15451319_15451403_15453040_15453206_15457959_15458068_15459718_15460314_15461630
transcript_193855.nic	chr9	-	1304	10	ISM	ENSG00000164985.15	ENST00000380716.8	1889	11	-10	1995	-9	-550	5prime_fragment	FALSE	canonical	3	1204	junction_9	356.916112148375	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTATTTTTTTTTTTCTA	-15477300	True	NA	0	True	NA	NA	NA	15511004	15472630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_15472751_15474008_15474238_15478476_15478553_15479590_15479688_15486005_15486069_15486826_15486932_15489985_15490125_15506560_15506638_15510116_15510327_15510816
transcript_193859.known	chr9	+	5680	9	FSM	ENSG00000164975.16	ENST00000380821.8	3000	9	-172	-2508	-30	1674	multi-exon	TRUE	canonical	3	322	junction_4	16.5184555876147	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAAGTTAAAACTGTATA	NA	False	NA	NA	False	AATAAA	-4	NA	15422703	15464134	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_15423194_15423908_15423987_15433551_15433637_15444601_15444707_15447094_15447245_15451319_15451403_15453040_15453206_15457959_15458068_15459718
transcript_193863.nic	chr9	-	1183	9	ISM	ENSG00000164985.15	ENST00000380716.8	1889	11	-21	3385	-20	-1940	5prime_fragment	FALSE	canonical	3	1204	junction_8	374.30784038676	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGTGAAAAGGTATAAAG	-15477311	True	NA	-7	True	NA	NA	NA	15511015	15474020	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_15474238_15478476_15478553_15479590_15479688_15486005_15486069_15486826_15486932_15489985_15490125_15506560_15506638_15510116_15510327_15510816
transcript_193866.nic	chr9	-	1129	9	ISM	ENSG00000164985.15	ENST00000380716.8	1889	11	-25	3443	-24	-1998	5prime_fragment	FALSE	canonical	3	1204	junction_8	374.30784038676	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGCTAAAACAGGGGTTA	-15477315	True	NA	-65	True	GATAAA	-39	NA	15511019	15474078	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_15474238_15478476_15478553_15479590_15479688_15486005_15486069_15486826_15486932_15489985_15490125_15506560_15506638_15510116_15510327_15510816
transcript_193869.nic	chr9	-	1244	9	ISM	ENSG00000164985.15	ENST00000380716.8	1889	11	-208	3511	-207	-2066	5prime_fragment	FALSE	canonical	3	1204	junction_8	374.30784038676	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGATAAGCCAAGAAAAGA	-15511187	False	NA	-1	True	AAAAAG	-34	NA	15511202	15474146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_15474238_15478476_15478553_15479590_15479688_15486005_15486069_15486826_15486932_15489985_15490125_15506560_15506638_15510116_15510327_15510816
transcript_193871.nic	chr9	-	996	9	ISM	ENSG00000164985.15	ENST00000380716.8	1889	11	-21	3572	-20	-2127	5prime_fragment	FALSE	canonical	3	1204	junction_8	374.30784038676	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGGCAAGAGGAAAAACAAC	-15477311	True	NA	-62	True	AAGAAA	-3	NA	15511015	15474207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_15474238_15478476_15478553_15479590_15479688_15486005_15486069_15486826_15486932_15489985_15490125_15506560_15506638_15510116_15510327_15510816
transcript_193878.nic	chr9	-	908	6	ISM	ENSG00000164985.15	ENST00000380716.8	1889	11	-135	15369	-134	-102	5prime_fragment	FALSE	canonical	3	1204	junction_5	412.513078580546	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTCACTGACTTACCAA	-15511114	False	NA	0	True	NA	NA	NA	15511129	15486004	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_15486069_15486826_15486932_15489985_15490125_15506560_15506638_15510116_15510327_15510816
transcript_193879.nic	chr9	-	664	5	ISM	ENSG00000164985.15	ENST00000380716.8	1889	11	-10	16246	-9	-979	5prime_fragment	FALSE	canonical	3	1204	junction_4	421.123200500756	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAACTAGTGTTTCAAAGG	-15477300	True	NA	NA	False	ACTAAA	-39	NA	15511004	15486881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_15486932_15489985_15490125_15506560_15506638_15510116_15510327_15510816
transcript_193882.known	chr9	-	736	4	FSM	ENSG00000164985.15	ENST00000488797.1	736	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	860.158641698663	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCCCCATGTTGTTCTTG	-15477287	True	NA	NA	False	NA	NA	NA	15510991	15491951	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_15492226_15506560_15506638_15510116_15510327_15510816
transcript_193883.known	chr9	-	2065	3	FSM	ENSG00000164985.15	ENST00000484265.1	2065	3	0	0	0	0	multi-exon	FALSE	canonical	3	616	junction_2	757	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTAGGCCTTATTCTAG	-15477285	True	NA	NA	False	NA	NA	NA	15510989	15504958	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_15506638_15510116_15510330_15510816
transcript_193894.known	chr9	-	12808	7	FSM	ENSG00000173068.18	ENST00000380672.9	12808	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	12.7888840621673	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTCTTACCTTTCTGAT	-16870642	False	926	-1	True	ATTAAA	-18	NA	16870670	16409502	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_16419650_16435554_16437525_16552529_16552766_16582982_16583086_16727796_16727998_16738359_16738486_16870645
transcript_1939.nnic	chr1	+	1761	4	NNC	ENSG00000173673.8	novel	710	4	NA	NA	-2326	990	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	87.4541149530554	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGACACCAGAGGTCTAAT	6241806	False	NA	23	True	AATAAA	-31	NA	6241852	6246568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_6241977_6244350_6244447_6244547_6244630_6245109
transcript_193904.nic	chr9	+	492	2	NIC	ENSG00000234779.1	novel	428	3	NA	NA	11	0	intron_retention	FALSE	canonical	3	32	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGATTGTACTGTGAAAC	16726420	True	NA	4	True	AATAAA	-17	NA	16726824	16727524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_16727107_16727314
transcript_193905.known	chr9	+	428	3	FSM	ENSG00000234779.1	ENST00000450445.1	428	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	16	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGATTGTACTGTGAAAC	16726409	True	NA	4	True	AATAAA	-17	NA	16726813	16727524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_16726956_16727030_16727107_16727314
transcript_193912.known	chr9	+	4871	7	FSM	ENSG00000044459.15	ENST00000380641.4	4871	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	39.2799779361785	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTATTCATTATAGTGTA	17132850	True	NA	23	True	AATAAA	-35	NA	17135039	17302051	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_17135426_17143287_17143377_17226202_17226288_17235657_17235793_17236408_17236589_17273732_17273867_17298189
transcript_193917.nic	chr9	+	781	5	ISM	ENSG00000044459.15	ENST00000380641.4	4871	7	-59	65616	-1	-65616	5prime_fragment	FALSE	canonical	3	69	junction_4	22.6315598225133	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGCAAAACAGACTAGT	17132791	True	NA	NA	False	NA	NA	NA	17134980	17236435	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_17135426_17143287_17143377_17226202_17226288_17235657_17235793_17236408
transcript_193919.nic	chr9	+	910	5	ISM	ENSG00000044459.15	ENST00000380641.4	4871	7	-59	65487	-1	-65487	5prime_fragment	FALSE	canonical	3	69	junction_4	22.6315598225133	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAGCACTGATGCAAAAAT	17132791	True	NA	NA	False	AAGAAA	-3	NA	17134980	17236564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_17135426_17143287_17143377_17226202_17226288_17235657_17235793_17236408
transcript_193925.known	chr9	+	2272	3	FSM	ENSG00000044459.15	ENST00000484374.1	2272	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	53	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTCATGCTGATTCTG	17132792	True	NA	0	True	AATAAA	-8	NA	17134981	17168556	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_17135426_17143287_17143377_17166817
transcript_193929.known	chr9	+	2617	9	FSM	ENSG00000107295.10	ENST00000380607.5	2617	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	4.70206071845101	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAGGCTCTGCTCCTTCA	17578463	True	NA	16	True	AATAAA	-18	NA	17579065	17797124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_17579288_17747065_17747135_17761436_17761510_17786380_17786525_17787379_17787514_17789391_17789551_17791230_17791335_17793366_17793498_17795543
transcript_193932.known	chr9	+	1864	13	FSM	ENSG00000178031.18	ENST00000327883.11	1864	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	2.47767812455308	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTGTCAAAGCTGATGA	18473905	True	NA	NA	False	ATTAAA	-20	NA	18474099	18684957	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_18474296_18504828_18504957_18533246_18533293_18574029_18574267_18622242_18622370_18635942_18636018_18639253_18639412_18657638_18657751_18661934_18662074_18675856_18675908_18680311_18680517_18681811_18681960_18684715
transcript_193933.known	chr9	+	824	4	FSM	ENSG00000178031.18	ENST00000431052.6	824	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1.4142135623731	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAATTATGTACTAGACT	18473949	True	NA	NA	False	AATAAA	-18	NA	18474143	18574527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_18474296_18504828_18504957_18533246_18533293_18574029
transcript_193934.known	chr9	+	1599	1	FSM	ENSG00000155876.6	ENST00000380527.3	1599	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	264	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTCCTTATTTGAAATAA	19044253	True	NA	10	True	AATAAA	-19	NA	19049426	19051025	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_19049400_19051000
transcript_193935.known	chr9	-	6323	17	FSM	ENSG00000147874.11	ENST00000380502.8	6323	17	0	0	0	0	multi-exon	TRUE	canonical	3	92	junction_2	76.3611638449153	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTCTGGAATTTCCTATA	-19094240	True	NA	-4	True	AATAAA	-15	NA	19102904	19053140	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_19056405_19057960_19059002_19060087_19060224_19063007_19063194_19063513_19063581_19070218_19070301_19076601_19076705_19078175_19078303_19080478_19080673_19082872_19083044_19086733_19086783_19087090_19087157_19089411_19089560_19093170_19093304_19094316_19094396_19096673_19096770_19102523
transcript_193946.nic	chr9	-	2349	15	ISM	ENSG00000147874.11	ENST00000380502.8	6323	17	-410	7026	-410	-1403	5prime_fragment	FALSE	canonical	3	248	junction_10	35.4800892712219	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAGGAACTAATTGACTC	NA	False	NA	NA	False	AATAAA	-2	NA	19103314	19060166	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_19060224_19063007_19063194_19063513_19063581_19070218_19070301_19076601_19076705_19078175_19078303_19080478_19080673_19082872_19083044_19086733_19086783_19087090_19087157_19089411_19089560_19093170_19093304_19094316_19094396_19096673_19096770_19102523
transcript_193948.nic	chr9	-	1851	14	ISM	ENSG00000147874.11	ENST00000380502.8	6323	17	-57	9955	-57	-4332	5prime_fragment	FALSE	canonical	3	248	junction_9	25.3255723604545	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATACAGAGAGTAGTGCAT	-19094297	True	NA	NA	False	NA	NA	NA	19102961	19063095	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_19063194_19063513_19063581_19070218_19070301_19076601_19076705_19078175_19078303_19080478_19080673_19082872_19083044_19086733_19086783_19087090_19087157_19089411_19089560_19093170_19093304_19094316_19094396_19096673_19096770_19102523
transcript_19395.nnic	chr1	+	590	4	NNC	ENSG00000143494.16	novel	4224	9	NA	NA	0	475	at_least_one_novel_splicesite	FALSE	canonical	3	373	junction_3	555.950237581266	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTTCTCAGTGTGAAT	212922138	True	NA	-10	True	AATGAA	-16	NA	212950593	212952287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_212950741_212951338_212951393_212951588_212951819_212952128
transcript_193951.nic	chr9	-	1780	14	ISM	ENSG00000147874.11	ENST00000380502.8	6323	17	-52	10021	-52	-4398	5prime_fragment	FALSE	canonical	3	248	junction_9	25.3255723604545	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGCAATTTCTAAGAAAA	-19094292	True	NA	NA	False	AAGAAA	-5	NA	19102956	19063161	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_19063194_19063513_19063581_19070218_19070301_19076601_19076705_19078175_19078303_19080478_19080673_19082872_19083044_19086733_19086783_19087090_19087157_19089411_19089560_19093170_19093304_19094316_19094396_19096673_19096770_19102523
transcript_193955.nic	chr9	-	1738	13	ISM	ENSG00000147874.11	ENST00000380502.8	6323	17	-41	10372	-41	-4749	5prime_fragment	FALSE	canonical	3	248	junction_8	25.5933747937495	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTTTAAAATAAGTCTC	-19094281	True	NA	NA	False	NA	NA	NA	19102945	19063512	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_19063581_19070218_19070301_19076601_19076705_19078175_19078303_19080478_19080673_19082872_19083044_19086733_19086783_19087090_19087157_19089411_19089560_19093170_19093304_19094316_19094396_19096673_19096770_19102523
transcript_193961.nic	chr9	-	1310	6	ISM	ENSG00000147874.11	ENST00000380502.8	6323	17	-410	33953	-410	-28330	5prime_fragment	FALSE	canonical	3	248	junction_1	17.5225568910476	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTAAGTGACTTTTAGAG	NA	False	NA	NA	False	AATAAA	-1	NA	19103314	19087093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_19087157_19089411_19089560_19093170_19093304_19094316_19094396_19096673_19096770_19102523
transcript_193967.known	chr9	-	1897	8	FSM	ENSG00000147872.10	ENST00000276914.7	1897	8	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_4	30.358403335176	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTTTGTTCCATATG	-19125191	True	NA	-17	True	AATAAA	-25	NA	19127492	19115760	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_19116650_19118320_19118456_19119649_19119832_19120879_19121166_19123564_19123648_19126113_19126310_19126396_19126449_19127418
transcript_193973.nic	chr9	-	742	5	ISM	ENSG00000147872.10	ENST00000276914.7	1897	8	-51	5119	-51	220	5prime_fragment	FALSE	canonical	3	238	junction_1	31.8463106183432	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTGGAATTTTATCTTG	-19125242	True	NA	0	True	NA	NA	NA	19127543	19120879	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_19121166_19123564_19123648_19126113_19126310_19126396_19126449_19127418
transcript_193974.known	chr9	-	801	3	FSM	ENSG00000147872.10	ENST00000472715.1	801	3	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCTTTGGCAGATGTTTA	-19125189	True	NA	NA	False	NA	NA	NA	19127490	19125632	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_19126310_19126396_19126449_19127418
transcript_193975.known	chr9	+	6831	32	FSM	ENSG00000137145.21	ENST00000602925.5	6831	32	0	0	0	0	multi-exon	FALSE	canonical	1	17	junction_17	11.9875065036403	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	19230386	False	NA	NA	False	NA	NA	NA	19230434	19372858	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_19230834_19276157_19276480_19286768_19287022_19288595_19288666_19290703_19290877_19296007_19296247_19298055_19298123_19299228_19299288_19300186_19300332_19305351_19305528_19316416_19316518_19316620_19316840_19324361_19324508_19325938_19325975_19326063_19326195_19328029_19328163_19331977_19332185_19334976_19335106_19336269_19336415_19340991_19341115_19342632_19342780_19345920_19347087_19350701_19350880_19352072_19352183_19352489_19352666_19356971_19357155_19357964_19358161_19360243_19360490_19361845_19361964_19369836_19369988_19371755_19371821_19372036
transcript_193990.known	chr9	-	1369	6	FSM	ENSG00000137154.13	ENST00000380394.9	1369	6	0	0	0	0	multi-exon	FALSE	canonical	3	23091	junction_5	2518.69100923476	10340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACAAAGTATGTACTTTT	-19113371	True	NA	NA	False	ACTAAA	-24	NA	19380236	19375714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_19376389_19376493_19376652_19378367_19378515_19378707_19378919_19379486_19379619_19380189
transcript_194001.nic	chr9	-	733	5	ISM	ENSG00000137154.13	ENST00000380394.9	1369	6	-83	824	-83	-254	5prime_fragment	FALSE	canonical	3	23091	junction_4	2657.51655686282	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGGCTGCAGAATATGC	NA	False	NA	25	True	AATAAA	-1	NA	19380319	19376538	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_19376652_19378367_19378515_19378707_19378919_19379486_19379619_19380189
transcript_194009.known	chr9	-	892	2	FSM	ENSG00000137154.13	ENST00000380381.3	892	2	0	0	0	0	multi-exon	FALSE	canonical	3	23091	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAGTTCGTGGTTGCATT	-19113371	True	NA	20	True	AAGAAA	-6	NA	19380236	19378773	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_19379619_19380189
transcript_194010.known	chr9	-	1355	5	FSM	ENSG00000137154.13	ENST00000380384.5	1355	5	0	0	0	0	multi-exon	FALSE	canonical	3	24266	junction_1	2325.39893082886	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCAGACTCTGATCTCT	-19113341	True	NA	-37	True	AATAAA	-2	NA	19380206	19376269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_19376389_19376493_19376652_19378367_19378515_19378707_19378919_19379486
transcript_194011.known	chr9	-	863	6	FSM	ENSG00000137154.13	ENST00000315377.4	863	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	10857.96950447	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGTAACAAATAAATAAGAT	-19113333	True	NA	27	True	NA	NA	NA	19380198	19376284	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_19376389_19376493_19376652_19378367_19378515_19378707_19378919_19379486_19379619_19380087
transcript_194012.known	chr9	+	2773	6	FSM	ENSG00000177076.6	ENST00000340967.3	2773	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	2.57681974534503	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGGCATTTACTTAATA	19408286	True	NA	14	True	ATTAAA	-17	NA	19409008	19452505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_19409193_19423861_19423977_19424699_19424842_19434946_19435085_19446280_19446419_19450449
transcript_194014.known	chr9	+	1965	1	FSM	ENSG00000260912.1	ENST00000563205.1	1965	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGTTCCTTGTTGGTTT	19453106	False	NA	10	True	ATTAAA	-15	NA	19453208	19455173	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_19453200_19455200
transcript_194021.known	chr9	-	6724	11	FSM	ENSG00000171843.17	ENST00000380338.9	6724	11	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	7.68700201639105	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGGAATTGGATGTGATG	-20621841	True	NA	NA	False	AATAAA	-23	NA	20622499	20341668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_20346575_20353524_20353597_20354807_20354880_20360741_20360842_20363475_20363606_20365668_20365745_20413720_20414426_20448122_20448267_20456703_20456787_20620653_20620835_20622244
transcript_194025.nic	chr9	-	1011	5	ISM	ENSG00000171843.17	ENST00000380338.9	6724	11	-48	72457	-48	-51421	5prime_fragment	FALSE	canonical	3	19	junction_1	6.41774882649672	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCACTGAAAGAAGAGAAAAT	-20621889	True	NA	NA	False	AATAAA	-1	NA	20622547	20414125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_20414426_20448122_20448267_20456703_20456787_20620653_20620835_20622244
transcript_194030.nic	chr9	+	5827	44	FSM	ENSG00000188352.13	ENST00000338382.11	5794	44	-35	2	-35	0	multi-exon	TRUE	canonical	1	41	junction_35	35.9365614957287	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGTGCGTGTGACTTT	20682504	True	NA	12	True	AGTAAA	-12	NA	20684223	20995948	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_20684294_20715321_20715411_20717793_20717869_20720379_20720535_20740235_20740341_20758089_20758192_20764868_20765074_20770031_20770239_20778680_20778769_20781726_20781930_20789350_20789609_20819795_20819901_20820323_20820426_20820940_20821072_20822988_20823116_20862577_20862713_20865925_20865977_20866928_20867013_20874680_20874808_20881870_20882057_20885108_20885231_20907149_20907243_20912865_20912955_20916892_20916938_20923659_20923769_20926300_20926418_20929357_20929597_20933013_20933104_20944626_20944775_20946700_20946821_20948270_20948394_20948850_20948929_20949603_20949676_20950995_20951099_20952984_20953066_20976419_20976549_20978338_20978455_20981425_20981687_20982356_20982447_20986287_20986466_20988331_20988430_20990122_20990375_20993252_20993329_20995555
transcript_194039.nnic	chr9	+	778	2	NNC	ENSG00000188352.13	novel	6096	46	NA	NA	30	-96203	intron_retention	FALSE	canonical	3	27	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCAAGTTGTAAAAGTTT	20656397	True	NA	18	True	AATAAA	-26	NA	20658338	20673909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_20658827_20673619
transcript_194040.known	chr9	+	5765	43	ISM	ENSG00000188352.13	ENST00000338382.11	5794	44	31062	-5	-10965	0	3prime_fragment	FALSE	canonical	1	41	junction_34	33.4480678459965	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTGTGACTTTTGTTTTA	NA	False	NA	19	True	AGTAAA	-19	NA	20715320	20995955	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_20715411_20717793_20717869_20720379_20720535_20740235_20740341_20758089_20758192_20764868_20765074_20770031_20770239_20778680_20778769_20781726_20781930_20789350_20789609_20819795_20819901_20820323_20820426_20820940_20821072_20822988_20823116_20862577_20862713_20865925_20865977_20866928_20867013_20874680_20874808_20881870_20882057_20885108_20885231_20907149_20907243_20912865_20912955_20916892_20916938_20923659_20923769_20926300_20926418_20929357_20929597_20933013_20933104_20944626_20944775_20946700_20946821_20948270_20948394_20948850_20948929_20949603_20949676_20950995_20951099_20952984_20953066_20976419_20976549_20978338_20978455_20981425_20981687_20982356_20982447_20986287_20986466_20988331_20988430_20990122_20990375_20993252_20993329_20995555
transcript_194043.known	chr9	-	8277	7	FSM	ENSG00000188921.14	ENST00000495827.3	8277	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	4.30761599444003	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACATGTCAGAAATGTGT	-21031364	True	NA	NA	False	AATAAA	-26	NA	21031640	20999508	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_21007120_21008020_21008147_21011588_21011696_21015897_21016011_21026595_21026724_21029294_21029399_21031552
transcript_194044.known	chr9	-	2702	4	FSM	ENSG00000171889.6	ENST00000304425.4	2702	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.44948974278318	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCAGGGCAGTGAGCCCC	-21559506	True	NA	NA	False	NA	NA	NA	21559831	21453846	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_21455945_21476898_21477036_21477168_21477293_21559488
transcript_194045.known	chr9	-	2557	4	FSM	ENSG00000171889.6	ENST00000654736.1	2557	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.44948974278318	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTTTCCTTTACTGATT	NA	False	NA	NA	False	ATTAAA	-10	NA	21559900	21453801	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_21455945_21476898_21477036_21477168_21477293_21559747
transcript_194047.known	chr9	+	6032	8	FSM	ENSG00000099810.21	ENST00000644715.2	6032	8	0	0	0	0	multi-exon	TRUE	canonical	3	294	junction_1	15.8655061600406	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTCTTATTTTTATTTT	21795427	True	NA	6	True	ATTAAA	-17	NA	21802635	21867081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_21802782_21815432_21815520_21816713_21816773_21818034_21818203_21837907_21838011_21854630_21854871_21859302_21859426_21861975
transcript_194056.known	chr9	+	1434	8	FSM	ENSG00000099810.21	ENST00000460874.6	1434	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	101.436015823387	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTAATCTCTACTTTCCT	21795433	True	NA	10	True	AATAAA	-7	NA	21802641	21862320	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_21802951_21815432_21815520_21816713_21816773_21818034_21818203_21837907_21838011_21854630_21854871_21859302_21859426_21861975
transcript_19406.nnic	chr1	+	755	4	NNC	ENSG00000143494.16	novel	581	3	NA	NA	0	475	at_least_one_novel_splicesite	FALSE	canonical	3	273	junction_2	96.2923788376953	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTTCTCAGTGTGAAT	212922085	True	NA	-10	True	AATGAA	-16	NA	212950540	212952287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_212950741_212951181_212951348_212951588_212951819_212952128
transcript_194069.known	chr9	+	2241	8	FSM	ENSG00000099810.21	ENST00000419385.5	2241	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	111.037592457579	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTTTTATTGTTATTT	21795448	True	NA	5	True	AATAAA	-21	NA	21802656	21863286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_21802782_21815432_21815545_21816713_21816773_21818034_21818203_21837907_21838011_21854630_21854871_21859302_21859426_21861975
transcript_194070.known	chr9	+	1309	8	FSM	ENSG00000099810.21	ENST00000580718.1	1309	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	110.940138298608	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGACTCTTTGGTTATTTA	21795453	True	NA	57	True	AAGAAA	-1	NA	21802661	21862367	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_21802782_21815432_21815520_21816713_21816773_21818034_21818203_21837907_21838011_21854630_21854871_21859285_21859426_21861975
transcript_194071.known	chr9	-	978	3	FSM	ENSG00000147889.18	ENST00000304494.10	978	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTGTCAACATTTATTG	-21974839	True	NA	NA	False	AATAAA	-29	NA	21974857	21967751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_21968243_21970901_21971209_21974677
transcript_194073.known	chr9	+	5586	2	FSM	ENSG00000176399.4	ENST00000325870.3	5586	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGTTTATGCTACATT	22446583	True	NA	10	True	AATAAA	-14	NA	22446823	22455740	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_22447733_22451063
transcript_194078.known	chr9	-	3789	7	FSM	ENSG00000107105.15	ENST00000544538.5	3789	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	54.3128795856829	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACAGTGTGGTGAGTA	-23819935	True	NA	-10	True	AATAAA	-14	NA	23821848	23690106	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_23692885_23693447_23693487_23701378_23701605_23704917_23705072_23731021_23731126_23762005_23762250_23821604
transcript_194081.known	chr9	-	2370	7	FSM	ENSG00000107105.15	ENST00000380117.5	2370	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	54.3128795856829	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACACCTAGTGAGCTTTTA	-23825824	True	NA	NA	False	NA	NA	NA	23826337	23691810	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_23692885_23693447_23693487_23701378_23701605_23704917_23705072_23731021_23731126_23762005_23762247_23825805
transcript_194089.known	chr9	-	3763	6	FSM	ENSG00000107105.15	ENST00000223951.10	3763	6	0	0	0	0	multi-exon	FALSE	canonical	1	18	junction_5	42.1122310024059	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAGTGTGGTGAGTAGGT	-23820967	False	NA	-7	True	AATAAA	-17	NA	23821480	23690103	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_23692885_23701378_23701605_23704917_23705072_23731021_23731126_23762005_23762250_23821226
transcript_194090.nic	chr9	-	3756	6	NIC	ENSG00000107105.15	novel	3789	7	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	48.7376651061579	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAGTGTGGTGAGTAGGT	-23821338	False	NA	-7	True	AATAAA	-17	NA	23821851	23690103	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_23692885_23701378_23701605_23704917_23705072_23731021_23731126_23762005_23762250_23821604
transcript_194096.nic	chr9	-	2282	6	NIC	ENSG00000107105.15	novel	3789	7	NA	NA	-3	233	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	48.7376651061579	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTACAAAAGAATATATAAG	-23821338	False	NA	NA	False	AATAAA	-6	NA	23821851	23691577	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_23692885_23701378_23701605_23704917_23705072_23731021_23731126_23762005_23762250_23821604
transcript_1941.nnic	chr1	+	2223	4	NNC	ENSG00000173673.8	novel	710	4	NA	NA	-1981	990	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	87.9242097869902	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGACACCAGAGGTCTAAT	6242046	False	NA	23	True	AATAAA	-31	NA	6242197	6246568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_6242784_6244350_6244447_6244547_6244630_6245109
transcript_194102.nic	chr9	-	2522	5	ISM	ENSG00000107105.15	ENST00000544538.5	3789	7	-3	9725	-3	1583	5prime_fragment	FALSE	canonical	0	0	junction_4	54.1548705104167	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	-23821338	False	NA	NA	False	ATTAAA	-19	NA	23821851	23699831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_23701605_23704917_23705072_23731021_23731126_23762005_23762250_23821604
transcript_194104.known	chr9	-	1476	1	FSM	ENSG00000198680.6	ENST00000358022.6	1476	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAAAGGTTGCGGCGAGT	-25678431	False	NA	-11	True	AATAAA	-20	NA	25678444	25676968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_25677000_25678400
transcript_194108.known	chr9	-	1236	6	FSM	ENSG00000120159.13	ENST00000483493.6	1236	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	178.888121461432	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCACAGCAACTGGAGCT	-26887898	True	NA	NA	False	NA	NA	NA	26892787	26842393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_26842648_26861065_26861140_26884809_26884903_26886103_26886189_26887312_26887514_26892258
transcript_194109.known	chr9	-	2789	6	FSM	ENSG00000120159.13	ENST00000333916.8	2789	6	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_5	31.2512399753994	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGTGTGTCTGTTCTAC	-26887913	True	NA	-2	True	ATTAAA	-18	NA	26892802	26840684	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_26842648_26861065_26861140_26884809_26884886_26886103_26886189_26887312_26887514_26892412
transcript_194120.nic	chr9	-	681	3	ISM	ENSG00000120159.13	ENST00000650615.1	2952	8	-33	45411	-22	-16196	5prime_fragment	FALSE	canonical	3	336	junction_2	29	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAAGATTCTTGAGGGT	-26887936	True	NA	NA	False	ATTAAA	-44	NA	26892825	26886121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_26886189_26887312_26887514_26892412
transcript_194122.nic	chr9	-	614	2	ISM	ENSG00000120159.13	ENST00000495958.5	520	4	-221	26224	-22	-17387	5prime_fragment	FALSE	canonical	3	336	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTTCATTACACATCAGA	-26887936	True	NA	NA	False	AAAAAG	-31	NA	26892825	26887312	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_26887514_26892412
transcript_194126.known	chr9	+	5325	20	FSM	ENSG00000096872.17	ENST00000380062.10	5325	20	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_3	14.2712154362444	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGCTATTTGTAATTTA	26954224	True	NA	NA	False	ATTAAA	-27	NA	26956411	27066134	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_26956517_26961948_26962088_26978127_26978264_26980570_26980620_26984256_26984356_26984498_26984560_26988668_26988729_26990133_26990196_27009019_27009159_27011905_27011969_27016906_27017051_27018646_27018688_27029024_27029105_27044741_27044796_27047273_27047372_27048147_27048275_27055608_27055773_27056333_27056460_27060590_27060652_27062617
transcript_194129.known	chr9	+	1462	14	FSM	ENSG00000096872.17	ENST00000429045.6	1462	14	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_13	41.5384615384615	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCGTGTGATTTACCAAA	26954291	True	NA	NA	False	AATAAA	-21	NA	26956478	27036800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_26956517_26961948_26962088_26978127_26978264_26980570_26980620_26984256_26984356_26984498_26984560_26988668_26988729_26990133_26990196_27009019_27009159_27011905_27011969_27016906_27017051_27018646_27018688_27029024_27029105_27036449
transcript_194131.nic	chr9	+	1102	12	ISM	ENSG00000096872.17	ENST00000429045.6	1462	14	-71	18113	-4	-18113	5prime_fragment	FALSE	canonical	3	130	junction_3	15.7789482099274	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTATCTTTATACTAGG	26954220	True	NA	NA	False	ATTAAA	-36	NA	26956407	27018687	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_26956517_26961948_26962088_26978127_26978264_26980570_26980620_26984256_26984356_26984498_26984560_26988668_26988729_26990133_26990196_27009019_27009159_27011905_27011969_27016906_27017051_27018646
transcript_194137.known	chr9	+	2432	21	FSM	ENSG00000096872.17	ENST00000648373.1	2432	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	46.4433795066638	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTAAAATAGTAAATAGT	26954162	True	NA	-33	True	NA	NA	NA	26956349	27062884	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_26956517_26961948_26962088_26978127_26978264_26980570_26980620_26984256_26984356_26984498_26984560_26988668_26988729_26990133_26990196_26992382_26992678_27009019_27009159_27011905_27011969_27016906_27017051_27018646_27018688_27029024_27029105_27044741_27044796_27047273_27047372_27048147_27048275_27055608_27055773_27056333_27056460_27060590_27060652_27062617
transcript_194139.known	chr9	+	652	7	FSM	ENSG00000096872.17	ENST00000517866.1	652	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	58.5047481453903	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGATGTCATATTTACT	26976496	False	NA	-19	True	NA	NA	NA	26976566	26990164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_26976783_26978127_26978264_26980570_26980620_26984256_26984356_26984498_26984560_26988668_26988729_26990133
transcript_194140.known	chr9	-	4724	14	FSM	ENSG00000137055.15	ENST00000397292.8	4724	14	0	0	0	0	multi-exon	TRUE	canonical	3	276	junction_4	40.6137820196646	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGATATACCCATTTCTT	-26941386	True	NA	-5	True	AATAAA	-16	NA	26947242	26903371	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_26906077_26907833_26907999_26910337_26910440_26913878_26913948_26917096_26917166_26919309_26919530_26920226_26920385_26923177_26923348_26925824_26925961_26926392_26926561_26928099_26928221_26928307_26928409_26935012_26935207_26946896
transcript_194142.nic	chr9	-	2930	13	NIC	ENSG00000137055.15	novel	4724	14	NA	NA	-248	538	combination_of_known_junctions	FALSE	canonical	3	184	junction_4	60.3880966931582	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTGTGAGATTTTCCTG	-26947476	False	NA	-11	True	AATAAA	-14	NA	26947490	26905344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_26906077_26907833_26907999_26910337_26910440_26913878_26913948_26919309_26919530_26920226_26920385_26923177_26923348_26925824_26925961_26926392_26926561_26928099_26928221_26928307_26928409_26935012_26935207_26946896
transcript_194144.known	chr9	-	2041	13	FSM	ENSG00000137055.15	ENST00000520884.5	2041	13	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_3	40.4793328612131	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAAGAAGTTTTATCTT	-26941377	True	NA	2	True	AATAAA	-23	NA	26947233	26907802	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_26907999_26910337_26910440_26913878_26913948_26917096_26917166_26919309_26919530_26920226_26920385_26923177_26923348_26925824_26925961_26926392_26926561_26928099_26928221_26928307_26928409_26935012_26935207_26946896
transcript_194148.nic	chr9	-	1967	12	NIC	ENSG00000137055.15	novel	2041	13	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	184	junction_3	61.9678669063703	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAAGAAGTTTTATCTT	-26941372	True	NA	2	True	AATAAA	-23	NA	26947228	26907802	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_26907999_26910337_26910440_26913878_26913948_26919309_26919530_26920226_26920385_26923177_26923348_26925824_26925961_26926392_26926561_26928099_26928221_26928307_26928409_26935012_26935207_26946896
transcript_194152.nic	chr9	-	2701	9	ISM	ENSG00000137055.15	ENST00000520884.5	2041	13	-66	10477	-57	913	5prime_fragment	FALSE	canonical	3	351	junction_7	24.5506491767529	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCAGGTGTGATGGATG	-26947285	False	NA	NA	False	AATACA	-6	NA	26947299	26918279	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_26919530_26920226_26920385_26923177_26923348_26925824_26925961_26926392_26926561_26928099_26928221_26928307_26928409_26935012_26935207_26946896
transcript_194154.known	chr9	+	4683	23	FSM	ENSG00000120156.22	ENST00000380036.10	4683	23	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	3.40666580410032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGGAGTGTGTCTCATAG	27109024	True	NA	14	True	AATAAA	-23	NA	27109224	27230174	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_27109643_27157830_27158143_27168494_27168606_27169476_27169630_27172615_27172748_27173221_27173363_27180239_27180369_27183458_27183611_27185484_27185630_27190528_27190691_27192488_27192624_27197314_27197600_27202819_27203120_27204910_27205066_27206581_27206793_27209120_27209232_27212706_27212898_27213483_27213598_27217687_27217759_27218776_27218818_27220048_27220146_27228205_27228306_27229157
transcript_194157.known	chr9	-	6487	4	FSM	ENSG00000120162.10	ENST00000262244.6	6487	4	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_3	9.62635271879577	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTCTGTCTTTTTTTAA	-27525397	True	NA	-2	True	AATAAA	-17	NA	27529814	27325208	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_27330617_27359033_27359237_27455132_27455749_27529554
transcript_194162.known	chr9	-	2678	12	FSM	ENSG00000147894.17	ENST00000644136.1	2678	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	75.4733820956679	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTTTTGTTTTCTTAAT	-27571763	True	NA	NA	False	NA	NA	NA	27573457	27547107	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_27548423_27548556_27548667_27550649_27550708_27554592_27554626_27556560_27556797_27558490_27558608_27560226_27560300_27561584_27561650_27562380_27562477_27565530_27565591_27566676_27567165_27573430
transcript_194164.known	chr9	-	3231	11	FSM	ENSG00000147894.17	ENST00000380003.8	3231	11	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_10	25.7699437329615	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTTTCAGTTGTTCATT	-27571787	True	NA	-2	True	AATAAA	-17	NA	27573481	27546545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_27548423_27548556_27548667_27550649_27550708_27556560_27556797_27558490_27558608_27560226_27560300_27561584_27561650_27562380_27562477_27565530_27565591_27566676_27567165_27573430
transcript_194169.known	chr9	+	1614	1	FSM	ENSG00000285103.2	ENST00000649931.1	1614	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCTGGATTAAATGACTC	27529052	False	NA	NA	False	AATAAA	-22	NA	27529084	27530698	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_27529100_27530700
transcript_194172.known	chr9	-	348	1	FSM	ENSG00000233278.1	ENST00000440331.1	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTGAGTTCTTAAAGAC	NA	False	NA	NA	False	NA	NA	NA	30832225	30831877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_30831900_30832200
transcript_194176.known	chr9	+	3601	22	FSM	ENSG00000122729.19	ENST00000379923.5	3601	22	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	179.231858097036	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTGACTTTGAGTTTTG	32379496	True	NA	11	True	AATGAA	-24	NA	32384619	32450836	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_32384736_32386370_32386439_32405484_32405604_32407260_32407430_32408513_32408652_32418127_32418198_32418327_32418512_32419037_32419178_32420855_32421028_32423318_32423420_32424548_32424666_32425837_32425998_32427300_32427437_32429418_32429504_32430417_32430575_32431718_32431844_32433727_32433833_32434558_32434702_32436249_32436398_32440464_32440588_32448895_32449082_32449997
transcript_194178.known	chr9	+	7443	21	FSM	ENSG00000122729.19	ENST00000309951.8	7443	21	0	0	0	0	multi-exon	FALSE	canonical	3	542	junction_5	45.4502750266706	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAAGTTCTCCTTATTTA	32379519	True	NA	NA	False	ATTAAA	-16	NA	32384642	32454769	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_32384736_32405484_32405604_32407260_32407430_32408513_32408652_32418127_32418198_32418327_32418512_32419037_32419178_32420855_32421028_32423318_32423420_32424548_32424666_32425837_32425998_32427300_32427437_32429418_32429504_32430417_32430575_32431718_32431844_32433727_32433833_32434558_32434702_32436249_32436398_32440464_32440588_32448895_32449082_32449997
transcript_194190.known	chr9	-	4628	18	FSM	ENSG00000107201.11	ENST00000379883.3	4628	18	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_9	28.535899808043	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGCAGTTCTT	-32525534	True	NA	NA	False	TATAAA	-4	NA	32526196	32455301	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_32457419_32459370_32459515_32466289_32466442_32467761_32467933_32472974_32473066_32476982_32477132_32480218_32480355_32481339_32481498_32485174_32485280_32487470_32487634_32487944_32488204_32488733_32488888_32489343_32489452_32491300_32491421_32492390_32492539_32493760_32493943_32500804_32500940_32526060
transcript_1942.known	chr1	-	1472	10	FSM	ENSG00000097021.20	ENST00000377860.8	1472	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	344.571481949449	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCACGTGTCCTGGGTGGT	-6387334	True	NA	-7	True	AATAAA	-17	NA	6393361	6264272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6264696_6281101_6281287_6282723_6282797_6294863_6294981_6318491_6318579_6327298_6327414_6333476_6333569_6339432_6339590_6349748_6349867_6393256
transcript_194204.known	chr9	-	1361	4	FSM	ENSG00000165264.11	ENST00000379847.8	1361	4	0	0	0	0	multi-exon	FALSE	canonical	3	2698	junction_1	181.715895470558	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGAATTTTATTTTTA	-32560374	True	NA	NA	False	AATAAA	-14	NA	32573159	32553000	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_32553945_32558909_32558955_32570959_32571053_32572880
transcript_194205.known	chr9	-	4131	3	FSM	ENSG00000197579.8	ENST00000360538.7	4131	3	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_2	24.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTTACATTGGTAGTT	-32550338	True	NA	-8	True	AATAAA	-21	NA	32552586	32540543	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_32544327_32550773_32550969_32552433
transcript_194216.known	chr9	-	666	3	FSM	ENSG00000165264.11	ENST00000350021.2	666	3	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	1483.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGGAAAACGGTATGGAAAA	-32560374	True	NA	22	True	NA	NA	NA	32573159	32553650	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_32553945_32570959_32571053_32572880
transcript_194218.known	chr9	-	761	3	FSM	ENSG00000165264.11	ENST00000366466.5	761	3	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_2	1302.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACAGCAATTCCATGCA	-32560399	True	NA	-11	True	AATAAA	-8	NA	32573184	32553532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_32553945_32558909_32558955_32572880
transcript_194219.nic	chr9	+	388	2	FSM	ENSG00000235453.12	ENST00000692500.1	360	2	-28	0	-28	0	multi-exon	FALSE	canonical	3	497	junction_1	0	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGTTTATTTTTGCATT	32550838	True	NA	9	True	AATAAA	-18	NA	32552298	32553007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_32552480_32552800
transcript_194222.known	chr9	-	2057	9	FSM	ENSG00000137074.20	ENST00000479656.6	2057	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	127.371933230991	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGTTGTATTCAGTTG	-32997728	True	NA	-15	True	AATAAA	-8	NA	33001613	32972621	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987843_32988078_32988125_32989758_32989896_32997242_32997349_33001566
transcript_194224.known	chr9	-	1914	9	FSM	ENSG00000137074.20	ENST00000465003.6	1914	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	133.762324198558	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTTGTATTCAGTTGTT	-32997698	True	NA	-13	True	AATAAA	-10	NA	33001583	32972619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988082_32988125_32989758_32989896_32997242_32997349_33001566
transcript_194230.known	chr9	-	2101	8	FSM	ENSG00000137074.20	ENST00000673487.1	2101	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	123.716100283624	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAATAAATTTGGATAAAAC	-33024080	True	NA	-30	True	AAAAAG	-32	NA	33025130	32972636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988082_32988125_32989758_32989896_33024803
transcript_194231.known	chr9	-	1814	8	FSM	ENSG00000137074.20	ENST00000485479.6	1814	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	143.319679780011	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTCTTTTTCCCTGAGA	-33024015	True	NA	-47	True	AAAAAG	-15	NA	33025065	32972653	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988091_32988125_32989758_32989896_33024999
transcript_194232.nic	chr9	-	1873	8	NIC	ENSG00000137074.20	novel	1977	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	94	junction_5	93.0413557379245	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGTATTCAGTTGTTTT	-32997756	True	NA	-11	True	AATAAA	-12	NA	33001641	32972617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988082_32988130_32989758_32989896_33001566
transcript_194236.nic	chr9	-	1983	8	NIC	ENSG00000137074.20	novel	2057	9	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	170	junction_6	71.0914903487049	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGTATTCAGTTGTTTT	-32997756	True	NA	-11	True	AATAAA	-12	NA	33001641	32972617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987843_32988078_32988125_32989758_32989896_33001566
transcript_194239.nic	chr9	-	1988	8	NIC	ENSG00000137074.20	novel	2057	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	172	junction_6	70.695957220671	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGTATTCAGTTGTTTT	-32997756	True	NA	-11	True	AATAAA	-12	NA	33001641	32972617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987843_32988078_32988130_32989758_32989896_33001566
transcript_194248.known	chr9	-	2022	8	FSM	ENSG00000137074.20	ENST00000483148.6	2022	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_7	121.435461989369	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTTTCCCTGAGAATAAA	-32997702	True	NA	-42	True	AAAAAG	-20	NA	33001587	32972648	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988082_32988130_32989758_32989896_33001332
transcript_194249.nic	chr9	-	1110	8	ISM	ENSG00000137074.20	ENST00000672846.1	1897	11	-33	86775	0	0	5prime_fragment	FALSE	canonical	3	94	junction_5	93.289761452352	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTCTATTATTGAGTGG	-32997756	True	NA	-7	True	ATTAAA	-21	NA	33001641	32973375	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988082_32988125_32989758_32989896_33001566
transcript_194254.nic	chr9	-	1225	8	NIC	ENSG00000137074.20	novel	2057	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	170	junction_6	71.0914903487049	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTCTATTATTGAGTGG	-32997756	True	NA	-7	True	ATTAAA	-21	NA	33001641	32973375	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987843_32988078_32988125_32989758_32989896_33001566
transcript_194256.nic	chr9	-	1256	8	NIC	ENSG00000137074.20	novel	1345	8	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_7	106.443623096732	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTCTATTATTGAGTGG	-32997731	True	NA	-7	True	ATTAAA	-21	NA	33001616	32973375	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987843_32988078_32988130_32989758_32989896_33001515
transcript_194257.nic	chr9	-	1230	8	NIC	ENSG00000137074.20	novel	2057	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	172	junction_6	70.695957220671	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTCTATTATTGAGTGG	-32997756	True	NA	-7	True	ATTAAA	-21	NA	33001641	32973375	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987843_32988078_32988130_32989758_32989896_33001566
transcript_194264.known	chr9	-	1068	7	FSM	ENSG00000137074.20	ENST00000476858.6	1068	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	112.724837054169	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTCTATTATTGAGTGG	-32997756	True	NA	-7	True	ATTAAA	-21	NA	33001641	32973375	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32989758_32989896_33001566
transcript_194265.known	chr9	-	1962	7	FSM	ENSG00000137074.20	ENST00000472896.6	1962	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	142.285413478996	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTTGTATTCAGTTGTT	-32997728	True	NA	-13	True	AATAAA	-10	NA	33001613	32972619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32989758_32989896_33001515
transcript_194271.known	chr9	-	1742	7	FSM	ENSG00000137074.20	ENST00000309615.8	1742	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	138.950130942324	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTCTGATGCATGGAAAGG	-32997710	True	NA	44	True	NA	NA	NA	33001595	32972706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32989758_32989896_33001515
transcript_194274.known	chr9	-	2032	7	FSM	ENSG00000137074.20	ENST00000672286.1	2032	7	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_5	72.3642407086078	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTAAGTAGGTGGAAACT	-32997702	True	NA	-5	True	AATAAA	-22	NA	33001587	32972755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32988130_32989758_32989896_33001566
transcript_194280.known	chr9	-	1977	8	FSM	ENSG00000137074.20	ENST00000379817.7	1977	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	118.262074932528	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTCAGTTGTTTTTT	-32997743	True	NA	-9	True	AATAAA	-14	NA	33001628	32972615	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988130_32989758_32989896_33001566
transcript_194281.known	chr9	-	1740	8	FSM	ENSG00000137074.20	ENST00000397172.8	1740	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	136.487272337768	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTCAGTTGTTTTTT	-32997722	True	NA	-9	True	AATAAA	-14	NA	33001607	32972615	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987759_32987847_32988082_32988130_32989758_32989896_33001566
transcript_194282.known	chr9	-	2023	8	FSM	ENSG00000137074.20	ENST00000379825.7	2023	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	133.751063318299	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTTTTTGGGATAATAT	-32997743	True	NA	1	True	AATAAA	-24	NA	33001628	32972605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_32973689_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988130_32989758_32989896_33001566
transcript_194285.known	chr9	+	2319	9	FSM	ENSG00000086061.16	ENST00000330899.5	2319	9	0	0	0	0	multi-exon	FALSE	canonical	3	1963	junction_5	122.308779325116	756	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTCACTACAGGCTTT	32987745	True	NA	14	True	AATATA	-22	NA	33025272	33039907	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_33025384_33026474_33026617_33026812_33026991_33029884_33029990_33030439_33030668_33034215_33034331_33036573_33036690_33037014_33037116_33038684
transcript_19429.known	chr1	-	4690	9	FSM	ENSG00000174606.14	ENST00000366962.8	4690	9	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_8	74.5334446741864	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGCCTGAAGGTTTT	-213015424	False	NA	NA	False	AATAAA	-15	NA	213015867	212992181	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_212995193_212997154_212997319_213000325_213000384_213000785_213000913_213005032_213005455_213007128_213007199_213008209_213008467_213013092_213013419_213015612
transcript_194300.known	chr9	-	7136	12	FSM	ENSG00000122692.9	ENST00000397149.4	7136	12	0	0	0	0	multi-exon	TRUE	canonical	3	498	junction_6	41.720042946659	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTCCTTTTAATGGCTGT	-33058076	True	NA	85	True	AGTAAA	-30	NA	33076674	33041764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_33047392_33048105_33048259_33053122_33053291_33056112_33056240_33056836_33056965_33057597_33057715_33060464_33060585_33062048_33062178_33068823_33068935_33071739_33071893_33073595_33073807_33076582
transcript_194312.nic	chr9	-	3151	9	ISM	ENSG00000122692.9	ENST00000397149.4	7136	12	-17	12402	-17	-12402	5prime_fragment	FALSE	canonical	3	498	junction_3	32.9089653438087	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTTTTTGTTTTGTTTGT	-33058093	True	NA	NA	False	AAAAAG	-10	NA	33076691	33054166	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_33056240_33056836_33056965_33057597_33057715_33060464_33060585_33062048_33062178_33068823_33068935_33071739_33071893_33073595_33073807_33076582
transcript_194314.nic	chr9	-	508	4	ISM	ENSG00000122692.9	ENST00000397149.4	7136	12	-23	27141	-23	-27141	5prime_fragment	FALSE	canonical	3	543	junction_2	23.7907545067406	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGAGCAGCAATTGCCC	-33058099	True	NA	NA	False	AAGAAA	-2	NA	33076697	33068905	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_33068935_33071739_33071893_33073595_33073807_33076582
transcript_194315.known	chr9	-	4176	6	FSM	ENSG00000086062.13	ENST00000379731.5	4176	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	7.66811580507233	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCAGGTGGTTTCTGTTTG	-33165841	True	NA	-5	True	AATAAA	-18	NA	33167336	33110641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_33113587_33113773_33113879_33115990_33116114_33120418_33120607_33135188_33135425_33166757
transcript_194316.known	chr9	-	1396	8	FSM	ENSG00000107262.26	ENST00000379707.7	1396	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	207.086888990676	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAAGCTCCTATCTGTTT	-33258298	True	NA	-33	True	AATGAA	-23	NA	33264720	33255048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_33255309_33255864_33255928_33256800_33256909_33258919_33259034_33261086_33261170_33262104_33262247_33262701_33262831_33264223
transcript_194320.known	chr9	-	1128	7	FSM	ENSG00000107262.26	ENST00000379704.7	1128	7	0	0	0	0	multi-exon	TRUE	canonical	3	445	junction_6	25.4389246802786	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTGTCTCTGTGGTTGT	-33258149	False	NA	-10	True	AGTAAA	-18	NA	33264571	33255025	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_33255309_33255864_33255928_33256800_33256909_33258919_33259034_33261086_33261170_33262701_33262831_33264223
transcript_194330.known	chr9	+	1901	8	FSM	ENSG00000086065.14	ENST00000223500.9	1901	8	0	0	0	0	multi-exon	FALSE	canonical	3	766	junction_1	55.8120022202817	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTAGAAGTCTCTGTA	33252155	True	NA	NA	False	AATAAA	-16	NA	33265048	33282070	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_33265148_33266009_33266115_33267852_33267900_33270622_33270717_33271151_33271224_33276455_33276565_33278112_33278226_33280808
transcript_194334.known	chr9	+	4599	24	FSM	ENSG00000086102.19	ENST00000379540.8	4599	24	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_17	73.3353640092332	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGGCTGCCTTTTGGTGTT	33286877	True	NA	4	True	ATTAAA	-19	NA	33290515	33371157	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_33290598_33294419_33295428_33301262_33301422_33303190_33303269_33307193_33307300_33311105_33311178_33313653_33313794_33318730_33318831_33318909_33319128_33328580_33328679_33332471_33332503_33338509_33338590_33342745_33342855_33344068_33344189_33347037_33347118_33351559_33351791_33352645_33352720_33354085_33354188_33354850_33354893_33364009_33364109_33364707_33364775_33366628_33366775_33367514_33367620_33369905
transcript_194337.known	chr9	+	3609	21	FSM	ENSG00000086102.19	ENST00000379521.8	3609	21	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_17	70.4687696784895	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGAAAGAAAGCTC	33286873	True	NA	NA	False	AAAAAG	-4	NA	33290511	33365283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_33290598_33294419_33295428_33301262_33301422_33303190_33303269_33307193_33307300_33311105_33311178_33313653_33313794_33318730_33318831_33318909_33319128_33328580_33328679_33332471_33332503_33338509_33338590_33342745_33342855_33344068_33344189_33347037_33347118_33351559_33351791_33352645_33352720_33354085_33354188_33354850_33354893_33364009_33364109_33364707
transcript_194342.known	chr9	+	3513	16	FSM	ENSG00000086102.19	ENST00000318524.6	3513	16	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_15	22.4267697183522	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGCATATTTATTGTAC	33286906	True	NA	15	True	AATAAA	-15	NA	33290544	33348723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_33290598_33294419_33295428_33301262_33301422_33303190_33303269_33307193_33307300_33311105_33311178_33313653_33313794_33318730_33318831_33318909_33319128_33328580_33328679_33332471_33332503_33338509_33338590_33342745_33342855_33344068_33344189_33347037_33347118_33347662
transcript_19435.nic	chr1	-	2191	9	NIC	ENSG00000174606.14	novel	4690	9	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	112	junction_8	67.5248796740875	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTTCATTTCATAAT	-213015085	False	NA	9	True	AATATA	-26	NA	213015528	212994728	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_212995193_212997154_212997319_213000325_213000384_213000785_213000913_213005032_213005455_213007128_213007199_213008209_213008467_213013092_213013419_213015225
transcript_194350.known	chr9	-	1825	6	FSM	ENSG00000165272.16	ENST00000297991.6	1825	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	2.33238075793812	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCAGTTGTGCAAATATC	-33447118	True	NA	-13	True	AATAAA	-19	NA	33447593	33441159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_33442212_33442300_33442519_33442851_33442971_33443320_33443459_33443765_33443893_33447422
transcript_194351.known	chr9	-	4834	26	FSM	ENSG00000165271.17	ENST00000297990.9	4834	26	0	0	0	0	multi-exon	TRUE	canonical	3	121	junction_19	19.2210717703254	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTCGTGTCCTTCCTAG	-33468904	True	NA	-1	True	NA	NA	NA	33473924	33461352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_33462814_33463032_33463135_33463246_33463442_33463830_33463921_33464036_33464162_33464878_33464977_33465206_33465360_33465733_33465898_33466070_33466226_33466307_33466426_33466568_33466710_33466911_33466988_33467113_33467263_33467393_33467517_33467690_33467869_33468029_33468146_33468320_33468423_33468507_33468567_33468751_33468873_33468957_33469122_33469206_33469342_33469498_33469668_33470011_33470192_33472003_33472121_33472205_33472413_33473788
transcript_194353.nic	chr9	+	2267	11	ISM	ENSG00000230453.10	ENST00000684830.1	4160	19	-753	24950	-753	114	5prime_fragment	FALSE	canonical	3	11	junction_6	4.55631429995781	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATTCAGGAAATTAAAAG	NA	False	NA	NA	False	AATAAA	-29	NA	33523497	33548063	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_33524696_33528726_33528842_33528999_33529174_33533438_33533546_33534369_33534508_33536877_33536946_33539448_33539503_33540077_33540213_33541146_33541228_33543184_33543256_33547937
transcript_194354.nic	chr9	+	2070	9	ISM	ENSG00000230453.10	ENST00000684830.1	4160	19	-753	31786	-753	1669	5prime_fragment	FALSE	canonical	3	11	junction_6	3.89711431702997	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACACTTGAGTATCTC	NA	False	NA	NA	False	AAAAAG	-45	NA	33523497	33541227	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_33524696_33528726_33528842_33528999_33529174_33533438_33533546_33534369_33534508_33536877_33536946_33539448_33539503_33540077_33540213_33541146
transcript_194355.nic	chr9	+	1989	8	ISM	ENSG00000230453.10	ENST00000684830.1	4160	19	-753	32801	-753	654	5prime_fragment	FALSE	canonical	3	11	junction_6	3.95381500088516	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTTTTGTATTTTTAGT	NA	False	NA	NA	False	NA	NA	NA	33523497	33540212	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_33524696_33528726_33528842_33528999_33529174_33533438_33533546_33534369_33534508_33536877_33536946_33539448_33539503_33540077
transcript_194360.known	chr9	+	873	4	FSM	ENSG00000281128.2	ENST00000627688.1	873	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	7.07106781186548	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAACTTCCTCATTCTTC	33677123	False	NA	NA	False	AATAAA	-16	NA	33677267	33688011	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_33677510_33678089_33678288_33680893_33681074_33687758
transcript_194362.known	chr9	+	4477	5	FSM	ENSG00000107341.5	ENST00000263228.4	4477	5	0	0	0	0	multi-exon	FALSE	canonical	3	480	junction_4	31.2999600638723	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATGACCCTCTTCTTTT	33816739	True	NA	35	True	AATAAA	-36	NA	33817159	33920399	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_33817935_33886880_33886968_33900173_33900272_33911963_33912099_33917017
transcript_194366.nnic	chr9	+	1928	4	NIC	ENSG00000107341.5	novel	4477	5	NA	NA	0	-2414	combination_of_known_splicesites	FALSE	canonical	3	20	junction_3	231.932461433639	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAACTGAGCACTTGGTTG	33816739	True	NA	14	True	AATAAA	-16	NA	33817159	33917985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_33817935_33886880_33886968_33900173_33900272_33917017
transcript_194371.known	chr9	+	804	5	FSM	ENSG00000010438.17	ENST00000361005.10	804	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	2.12132034355964	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGTCTGTGCCGGCTC	33750601	True	NA	16	True	AATAAA	-16	NA	33750678	33799231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_33750728_33796642_33796803_33797828_33798083_33798485_33798623_33799027
transcript_194372.known	chr9	-	4362	30	FSM	ENSG00000137073.24	ENST00000684158.1	4362	30	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_29	70.7153864018261	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCTGAGAGCATGCATGG	-34043827	True	NA	-22	True	NA	NA	NA	34048879	33921707	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_33922600_33922686_33922879_33922965_33923034_33923185_33923294_33923378_33923479_33923794_33924001_33924205_33924285_33926616_33926665_33926988_33927081_33927796_33927993_33932561_33932629_33933489_33933629_33935838_33935879_33941648_33941863_33943419_33943590_33944364_33944640_33948373_33948588_33953284_33953475_33956078_33956147_33960825_33960879_33963725_33963792_33971650_33971755_33973182_33973238_33986759_33986838_33988972_33989127_33996222_33996334_33998786_33998865_34017049_34017190_34032798_34032909_34048824
transcript_194374.known	chr9	-	4275	29	FSM	ENSG00000137073.24	ENST00000379238.7	4275	29	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_21	38.6693861933627	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTCTCTGTGTGGTGTG	-34043835	True	NA	-7	True	AATAAA	-15	NA	34048887	33921692	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_33922600_33922686_33922879_33922965_33923034_33923185_33923294_33923378_33923479_33923794_33924001_33924205_33924285_33926616_33926665_33926988_33927081_33927796_33927993_33932561_33932629_33933489_33933629_33935838_33935879_33941648_33941863_33943419_33943590_33944364_33944640_33948373_33948588_33953284_33953475_33956078_33956147_33960825_33960879_33963725_33963792_33971650_33971755_33973182_33973238_33986759_33986838_33988972_33989127_33996222_33996334_33998786_33998865_34017049_34017190_34048824
transcript_194375.known	chr9	-	4437	29	FSM	ENSG00000137073.24	ENST00000682239.1	4437	29	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_28	57.9550648417921	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCTGAGAGCATGCATGG	-34049340	True	NA	-22	True	NA	NA	NA	34049388	33921707	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_33922600_33922686_33922879_33922965_33923034_33923185_33923294_33923378_33923479_33923794_33924001_33924205_33924285_33926616_33926665_33926988_33927081_33927796_33927993_33932561_33932629_33933489_33933629_33935838_33935879_33941648_33941863_33943419_33943590_33944364_33944640_33948373_33948588_33953284_33953475_33956078_33956147_33960825_33960879_33963725_33963792_33971650_33971755_33973182_33973238_33986759_33986838_33988972_33989127_33996222_33996334_33998786_33998865_34017049_34017190_34049148
transcript_194381.known	chr9	-	4079	27	FSM	ENSG00000137073.24	ENST00000379239.9	4079	27	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_12	68.6172063400803	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCCAATCCCCACCTAATA	-34043816	True	NA	-43	True	NA	NA	NA	34048868	33921728	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_33922600_33922686_33922879_33922965_33923034_33923185_33923294_33923378_33923479_33923794_33924001_33924205_33924285_33926616_33926665_33926988_33927081_33927796_33927993_33932561_33932629_33933489_33933647_33935838_33935879_33941648_33941863_33943419_33943590_33944364_33944640_33948373_33948588_33953284_33953475_33956078_33956147_33960825_33960879_33963725_33963792_33986759_33986838_33988972_33989127_33996222_33996334_33998786_33998865_34017049_34017190_34048824
transcript_194399.nic	chr9	-	502	5	ISM	ENSG00000137073.24	ENST00000683084.1	4165	25	-47	67183	15	5417	5prime_fragment	FALSE	canonical	3	197	junction_4	24.4169510791171	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAATAGAGAGAAGAAAAG	-34043882	True	NA	-41	True	AAAAAG	-31	NA	34048934	33989063	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_33989127_33996222_33996334_33998786_33998865_34017049_34017190_34048824
transcript_1944.known	chr1	-	1614	9	FSM	ENSG00000097021.20	ENST00000377855.6	1614	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_8	256.698236018481	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCACGTGTCCTGGGTGGT	-6385801	False	6027	-7	True	AATAAA	-17	NA	6385813	6264272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6264696_6281101_6281287_6294863_6294981_6318491_6318579_6327298_6327414_6333476_6333569_6339432_6339590_6349748_6349867_6385493
transcript_194402.known	chr9	-	3592	9	FSM	ENSG00000198876.13	ENST00000361264.9	3592	9	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_7	23.576670142325	177	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGTGTGAGTGAGTATT	-34123481	True	NA	-3	True	AATAAA	-16	NA	34126698	34086386	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34088509_34089411_34089591_34093285_34093449_34096715_34096782_34098323_34098518_34106433_34106495_34107358_34107566_34125022_34125278_34126353
transcript_194405.known	chr9	-	6295	13	FSM	ENSG00000186638.17	ENST00000402558.7	6295	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	3.83966867783609	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTATGACTAGGTGTTAT	-34328449	True	NA	NA	False	AATACA	-21	NA	34329268	34252379	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34254521_34255071_34255166_34255734_34257982_34259595_34259706_34263100_34263173_34269256_34269363_34271808_34271931_34286616_34286705_34290173_34290390_34297016_34297115_34306251_34306442_34310723_34311372_34329105
transcript_194414.nnic	chr9	+	2856	8	NNC	ENSG00000165006.14	novel	2705	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	130.526875800053	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTCTTGGTGTGATAAC	34173591	True	NA	6	True	AATAAA	-11	NA	34179004	34252520	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_34179241_34216673_34216790_34220907_34220949_34234215_34234341_34241184_34242109_34249778_34249962_34250657_34250760_34251391
transcript_194422.known	chr9	+	2705	7	FSM	ENSG00000165006.14	ENST00000297661.9	2705	7	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_4	37.9286611065212	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGTGTGATAACTTC	34173629	True	NA	9	True	AATAAA	-14	NA	34179042	34252523	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_34179241_34220907_34220949_34234215_34234341_34241184_34242109_34249778_34249962_34250657_34250760_34251391
transcript_194430.known	chr9	+	1753	6	FSM	ENSG00000165006.14	ENST00000626262.2	1753	6	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_2	108.8154400809	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGGTGGGGAAGATTCGG	34173631	True	NA	-78	True	NA	NA	NA	34179044	34251698	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_34179241_34220907_34220949_34241184_34242109_34249778_34249962_34250657_34250760_34251391
transcript_194432.known	chr9	+	2029	6	FSM	ENSG00000165006.14	ENST00000625521.2	2029	6	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	101.749889434829	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCCTGGCCTAGTTGCTG	34173591	True	NA	74	True	NA	NA	NA	34179004	34251850	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_34179241_34234215_34234341_34241184_34242109_34249778_34249962_34250657_34250760_34251391
transcript_194438.known	chr9	+	960	4	FSM	ENSG00000164978.18	ENST00000346365.8	960	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	13.0979218029257	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTTGTGTTTATTTCT	34327649	True	NA	35	True	AATAAA	-28	NA	34329505	34343711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_34329600_34338712_34338848_34339023_34339167_34343123
transcript_194439.known	chr9	+	825	3	FSM	ENSG00000164978.18	ENST00000618590.1	825	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	41.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTTGTGTTTATTTCT	34327649	True	NA	35	True	AATAAA	-28	NA	34329505	34343711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_34329600_34339023_34339167_34343123
transcript_194440.known	chr9	-	6447	2	FSM	ENSG00000164976.9	ENST00000297625.8	6447	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTGTTTTATTGATTAA	-34375836	True	NA	NA	False	AATAAA	-21	NA	34376898	34366665	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34373007_34376792
transcript_194443.known	chr9	-	648	4	FSM	ENSG00000164972.14	ENST00000379124.5	648	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	11.5758369027902	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTCCTGTGTCCTTA	-34381377	True	NA	2	True	AATAAA	-20	NA	34381531	34379018	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34379182_34379645_34379733_34380896_34381132_34381368
transcript_194444.known	chr9	-	712	4	FSM	ENSG00000164972.14	ENST00000379133.7	712	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	11.2644968324772	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTCCTGTGTCCTTA	-34381446	True	NA	2	True	AATAAA	-20	NA	34381600	34379018	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34379182_34379645_34379733_34380901_34381132_34381368
transcript_194446.known	chr9	-	3624	6	FSM	ENSG00000164970.15	ENST00000379089.5	3624	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	25.5702952661873	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCAGCTCCCTCCCTGGG	-34456711	True	NA	NA	False	ATTAAA	-17	NA	34458552	34398183	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34401120_34401665_34401721_34402386_34402468_34402704_34402808_34405864_34405965_34458203
transcript_194447.known	chr9	-	3591	6	FSM	ENSG00000164970.15	ENST00000379080.5	3591	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	32.8426551910773	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCAGCTCCCTCCCTGGG	-34456711	True	NA	NA	False	ATTAAA	-17	NA	34458552	34398183	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34401120_34401665_34401721_34402386_34402468_34402704_34402808_34405864_34405965_34458236
transcript_194448.known	chr9	-	3573	6	FSM	ENSG00000164970.15	ENST00000379087.5	3573	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	20.7325830518052	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCAGCTCCCTCCCTGGG	-34456711	True	NA	NA	False	ATTAAA	-17	NA	34458552	34398183	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34401120_34401665_34401721_34402386_34402468_34402704_34402808_34405915_34405965_34458203
transcript_194449.nic	chr9	-	3579	6	NIC	ENSG00000164970.15	novel	3591	6	NA	NA	-21	0	intron_retention	FALSE	canonical	1	4	junction_5	31.1871768520333	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCAGCTCCCTCCCTGGG	-34456750	True	NA	NA	False	ATTAAA	-17	NA	34458591	34398183	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_34401120_34401665_34401721_34402386_34402468_34402704_34402808_34405915_34405965_34458236
transcript_194450.known	chr9	-	798	6	FSM	ENSG00000164970.15	ENST00000422409.5	798	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	22.2117086240568	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCATGTGCTGCCAGGCCA	-34456711	True	NA	NA	False	NA	NA	NA	34458552	34401012	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34401123_34401665_34401721_34402386_34402468_34402704_34402808_34405864_34405965_34458203
transcript_194452.known	chr9	-	3588	6	FSM	ENSG00000164970.15	ENST00000297620.8	3588	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_4	14.1901374200534	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCAGCCTCAGCTCCCTC	-34456729	True	NA	NA	False	ATTAAA	-11	NA	34458570	34398189	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34401123_34401665_34401721_34402386_34402468_34402704_34402808_34405915_34405965_34458203
transcript_194453.known	chr9	-	3543	6	FSM	ENSG00000164970.15	ENST00000379081.5	3543	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	30.0772339153719	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCAGCTCCCTCCCTGGG	-34456711	True	NA	NA	False	ATTAAA	-17	NA	34458552	34398183	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34401123_34401665_34401721_34402386_34402468_34402704_34402808_34405915_34405965_34458236
transcript_194454.known	chr9	-	1028	2	FSM	ENSG00000168913.7	ENST00000399775.3	1028	2	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_1	0	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGAGGTTTTCTTCTCTT	-34521325	True	NA	-5	True	AATAAA	-17	NA	34522990	34521042	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34521857_34522776
transcript_194456.known	chr9	-	2038	10	FSM	ENSG00000122756.15	ENST00000378980.8	2038	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_9	15.4568295664704	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTTGGAACAGACCCACT	-34588788	True	NA	-2	True	ATTAAA	-17	NA	34589724	34551432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34552072_34552160_34552330_34552673_34552855_34556254_34556419_34557525_34557693_34557866_34557985_34564598_34564833_34568896_34568982_34581094_34581206_34589554
transcript_194457.nnic	chr9	-	2081	10	NNC	ENSG00000122756.15	novel	1926	10	NA	NA	-303	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	23.769468953281	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCTTGGAACAGACCCAC	-34590421	False	NA	-3	True	ATTAAA	-16	NA	34590443	34551433	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_34552072_34552160_34552330_34552673_34552855_34556254_34556419_34557525_34557693_34557866_34557985_34564598_34564833_34568896_34568982_34581094_34581206_34590229
transcript_194458.known	chr9	-	1910	9	FSM	ENSG00000122756.15	ENST00000351266.8	1910	9	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_8	20.5635448062828	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTGGAACAGACCCACTT	-34588770	True	NA	-1	True	ATTAAA	-18	NA	34589706	34551431	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34552072_34552160_34552330_34552673_34552855_34556254_34556419_34557525_34557693_34557866_34557985_34564598_34564833_34568896_34568982_34589554
transcript_194459.known	chr9	-	1092	2	FSM	ENSG00000164967.10	ENST00000297613.4	1092	2	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGCCTGCTATGTGGAG	-34608414	False	3690	-1	True	AATAAA	-26	NA	34612104	34610485	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34611333_34611859
transcript_194460.known	chr9	-	872	2	FSM	ENSG00000164967.10	ENST00000378959.9	872	2	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	0	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCTCTACTCAGCCTGC	-34608407	False	3690	-10	True	AATAAA	-17	NA	34612097	34610494	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34611333_34612063
transcript_194462.known	chr9	-	828	7	FSM	ENSG00000137100.16	ENST00000259632.12	828	7	0	0	0	0	multi-exon	TRUE	canonical	3	251	junction_6	12.495554765151	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTGTGCTGGCTTCTTGG	-34616805	True	NA	1	True	AATAAA	-18	NA	34620495	34613545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34613872_34614041_34614102_34614709_34614769_34616029_34616114_34617884_34617972_34618675_34618761_34620368
transcript_194464.known	chr9	-	1672	4	FSM	ENSG00000147955.18	ENST00000277010.9	1672	4	0	0	0	0	multi-exon	TRUE	canonical	3	1026	junction_2	163.399986400108	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGTGTGTCTGAGCA	-34628369	True	NA	-16	True	AATAAA	-20	NA	34637787	34634721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34635859_34636996_34637090_34637219_34637421_34637546
transcript_194465.known	chr9	-	1612	4	FSM	ENSG00000147955.18	ENST00000679597.1	1612	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	518.696657230623	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGTGTGTCTGAGCA	-34628369	True	NA	-16	True	AATAAA	-20	NA	34637787	34634721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34635859_34636996_34637090_34637219_34637421_34637606
transcript_194466.known	chr9	-	1582	4	FSM	ENSG00000147955.18	ENST00000353468.4	1582	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	593.95529199502	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGTGTGTCTGAGCA	-34628326	True	NA	-16	True	AATAAA	-20	NA	34637744	34634721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34635859_34636996_34637090_34637266_34637421_34637546
transcript_194467.known	chr9	-	630	4	FSM	ENSG00000147955.18	ENST00000680277.1	630	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	606.021451765529	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGGCGTCATCCCATCC	-34628366	True	NA	NA	False	NA	NA	NA	34637784	34635783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34635859_34636996_34637113_34637219_34637421_34637546
transcript_194469.known	chr9	-	864	4	FSM	ENSG00000147955.18	ENST00000680244.1	864	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	581.764175208095	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCTTTCCATAGCTCCAC	-34628375	True	NA	NA	False	NA	NA	NA	34637793	34635317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34635641_34636996_34637090_34637219_34637421_34637546
transcript_194472.known	chr9	-	1842	3	FSM	ENSG00000147955.18	ENST00000497006.2	1842	3	0	0	0	0	multi-exon	FALSE	canonical	3	1162	junction_1	129	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGATCTGTTCCATCT	NA	False	NA	-33	True	AATAAA	-3	NA	34637844	34634738	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34635859_34636996_34637421_34637546
transcript_194474.known	chr9	-	840	3	FSM	ENSG00000147955.18	ENST00000477726.1	840	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	684	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCCAAACACAGAGACCCAT	-34628391	True	NA	NA	False	NA	NA	NA	34637809	34635482	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34635859_34637219_34637421_34637546
transcript_194475.known	chr9	-	1457	3	FSM	ENSG00000147955.18	ENST00000680730.1	1457	3	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	703	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACACACACACACATATCA	-34628391	True	NA	-113	True	NA	NA	NA	34637809	34634818	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34635859_34637266_34637421_34637546
transcript_194476.known	chr9	-	2878	2	FSM	ENSG00000147955.18	ENST00000681409.1	2878	2	0	0	0	0	multi-exon	FALSE	canonical	3	1420	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACACACATATCACAGTTT	-34628398	True	NA	-107	True	NA	NA	NA	34637816	34634812	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34637421_34637546
transcript_194481.known	chr9	+	1722	13	FSM	ENSG00000137070.19	ENST00000441545.7	1722	13	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_1	6.75102872819313	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTATCCAATGCTGCTTT	34651960	True	NA	29	True	AATAAA	-37	NA	34652184	34661902	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_34652234_34655217_34655318_34655604_34655666_34656738_34656909_34657034_34657150_34657302_34657336_34657420_34657588_34658519_34658684_34659758_34659901_34660273_34660394_34660503_34660601_34660853_34660937_34661481
transcript_194482.nnic	chr9	+	1546	12	NNC	ENSG00000213930.12	novel	1756	11	NA	NA	18	-6	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_10	102.919610769725	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTATCACATACTCTAAT	34643578	True	NA	8	True	AATAAA	-16	NA	34646606	34650577	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_34646787_34647088_34647259_34647491_34647568_34647656_34647706_34647831_34647962_34648114_34648172_34648333_34648457_34648761_34648895_34648997_34649082_34649409_34649565_34649961_34650142_34650368
transcript_194486.known	chr9	+	1756	11	FSM	ENSG00000213930.12	ENST00000378842.8	1756	11	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_5	23.5034040087814	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGGTAGGGAGTGTGTAGG	34643646	True	NA	NA	False	GGGGCT	-7	NA	34646674	34651035	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_34646787_34647088_34647259_34647491_34647568_34647656_34647706_34647831_34647962_34648114_34648172_34648333_34648457_34648761_34648895_34648997_34649082_34649409_34649565_34650368
transcript_1945.known	chr1	-	1804	9	FSM	ENSG00000097021.20	ENST00000545482.5	1804	9	0	0	0	0	multi-exon	FALSE	canonical	3	749	junction_8	43.8463225367875	900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCACGTGTCCTGGGTGGT	-6393511	True	NA	-7	True	AATAAA	-17	NA	6393766	6264272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6264696_6281101_6281287_6294863_6294981_6318491_6318579_6327298_6327414_6333476_6333569_6339432_6339590_6349748_6349867_6393256
transcript_194510.known	chr9	+	1164	9	FSM	ENSG00000213930.12	ENST00000554550.5	1164	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	96.1193919040274	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGAATTTGGGCAGATA	34643607	True	NA	-40	True	NA	NA	NA	34646635	34650529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_34646787_34647088_34647259_34647831_34647962_34648114_34648172_34648333_34648457_34648761_34648895_34648997_34649082_34649409_34649565_34650368
transcript_194521.known	chr9	+	1712	8	FSM	ENSG00000213930.12	ENST00000554638.5	1712	8	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_2	22.2948699141707	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCATTAATAAAACTGTGC	34643652	True	NA	-20	True	NA	NA	NA	34646680	34650549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_34646787_34647088_34647962_34648114_34648172_34648333_34648457_34648761_34648895_34648997_34649082_34649409_34649565_34650368
transcript_19455.known	chr1	-	851	3	FSM	ENSG00000174606.14	ENST00000481918.1	851	3	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_2	22.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTGCAAAATATTATTG	-213013207	True	NA	NA	False	ATTAAA	-16	NA	213015493	213008209	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_213008467_213013092_213013419_213015225
transcript_194551.known	chr9	-	338	4	FSM	ENSG00000187186.15	ENST00000544078.2	338	4	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_3	30.092450142113	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGCCCACCGTACTGACC	-34664410	True	NA	-17	True	ATTAAA	-10	NA	34666028	34665031	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34665191_34665313_34665374_34665612_34665681_34665977
transcript_194552.known	chr9	+	1410	3	FSM	ENSG00000230074.4	ENST00000654838.1	1410	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTTTTTTTTGAGGCAG	34665151	True	NA	NA	False	AAAAAG	-26	NA	34665606	34681981	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_34665768_34678095_34678269_34680905
transcript_194553.known	chr9	-	1521	3	FSM	ENSG00000187186.15	ENST00000421828.7	1521	3	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_1	7.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTCTATGACAAGCCCGAG	-34664427	True	NA	NA	False	NA	NA	NA	34666045	34664162	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_34665191_34665313_34665374_34665612
transcript_194562.known	chr9	+	2589	5	FSM	ENSG00000137094.16	ENST00000453597.8	2589	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	94.93945439068	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCTGAGCAGGAGCAACAA	NA	False	NA	18	True	AATAAA	-18	NA	34989640	34998431	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_34989832_34990667_34990813_34993199_34993445_34996264_34996867_34997025
transcript_194565.known	chr9	+	2391	4	FSM	ENSG00000137094.16	ENST00000312316.9	2391	4	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	22.3059533657621	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCTGAGCAGGAGCAACAA	34987242	True	NA	18	True	AATAAA	-18	NA	34989693	34998431	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_34989832_34993199_34993445_34996264_34996867_34997025
transcript_194567.known	chr9	+	852	4	FSM	ENSG00000137094.16	ENST00000469798.5	852	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	82.5523402992846	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCCCTGCAATGATGTC	34987297	True	NA	NA	False	NA	NA	NA	34989748	34997077	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_34989832_34993199_34993445_34996394_34996867_34997025
transcript_194569.known	chr9	+	2818	4	FSM	ENSG00000137094.16	ENST00000454002.6	2818	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	84.3682404699778	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGAGCAGGAGCAACAAAC	34987798	False	NA	20	True	AATAAA	-20	NA	34990249	34998433	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_34990813_34993199_34993445_34996264_34996867_34997025
transcript_194572.known	chr9	+	3068	4	FSM	ENSG00000137094.16	ENST00000545841.5	3068	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	89.5408038581046	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCCTAGGTTCAAGCGAC	34989771	True	NA	NA	False	NA	NA	NA	34990265	34998900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_34990612_34993199_34993445_34996264_34996867_34997025
transcript_194573.nic	chr9	+	2387	4	NIC	ENSG00000137094.16	novel	5228	3	NA	NA	-63	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	87.6596955403236	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCATCTGAGCAGGAGCAA	34991211	False	NA	15	True	AATAAA	-15	NA	34991279	34998428	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_34991417_34993199_34993445_34996264_34996867_34997025
transcript_194579.known	chr9	-	3382	17	FSM	ENSG00000165280.18	ENST00000417448.2	3382	17	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_16	692.294055003905	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATAAACGTTGGGTCAAA	-35069327	False	NA	-40	True	NA	NA	NA	35072205	35056587	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35057223_35057375_35057531_35059063_35059220_35059492_35059802_35060312_35060526_35060800_35060924_35061014_35061180_35061576_35061690_35062002_35062139_35062216_35062351_35062977_35063081_35064153_35064286_35065250_35065382_35066674_35066818_35067890_35068064_35068250_35068363_35071756
transcript_194580.known	chr9	-	3849	17	FSM	ENSG00000165280.18	ENST00000448530.6	3849	17	0	0	0	0	multi-exon	FALSE	canonical	2	37	junction_16	688.882519011769	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTATTGAATTTTTTT	-35031221	True	NA	-11	True	ATTAAA	-28	NA	35072668	35056063	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35057223_35057375_35057531_35059063_35059220_35059492_35059802_35060312_35060526_35060800_35060924_35061014_35061180_35061576_35061690_35062002_35062139_35062216_35062351_35062977_35063081_35064153_35064286_35065250_35065382_35066674_35066818_35067890_35068064_35068250_35068363_35072276
transcript_194581.known	chr9	-	3159	17	FSM	ENSG00000165280.18	ENST00000679862.1	3159	17	0	0	0	0	multi-exon	FALSE	canonical	1	25	junction_2	684.583860823493	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCACAAGCAGTTTCTAA	-35031164	True	NA	27	True	NA	NA	NA	35072611	35056633	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35057223_35057375_35057528_35059063_35059220_35059492_35059802_35060312_35060526_35060800_35060924_35061014_35061180_35061576_35061690_35062002_35062139_35062216_35062351_35062977_35063081_35064153_35064286_35065250_35065382_35066674_35066818_35067890_35068064_35068250_35068363_35072336
transcript_194597.known	chr9	-	2942	16	FSM	ENSG00000165280.18	ENST00000493886.5	2942	16	0	0	0	0	multi-exon	FALSE	canonical	2	2023	junction_3	246.819682269376	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCTATGCCATTTCTGT	-35031102	True	NA	9	True	NA	NA	NA	35072549	35056869	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35057223_35057375_35057531_35059063_35059220_35059492_35059802_35060312_35060526_35060800_35060924_35061014_35061180_35061576_35061690_35062002_35062351_35062977_35063081_35064153_35064286_35065250_35065382_35066674_35066818_35067890_35068064_35068250_35068363_35072336
transcript_194598.known	chr9	-	2895	16	FSM	ENSG00000165280.18	ENST00000679647.1	2895	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	694.589266321391	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTCAAAATGGAGCCTGAG	-35031198	True	NA	-28	True	AATAAA	-5	NA	35072645	35056575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35057096_35059140_35059220_35059492_35059802_35060312_35060526_35060800_35060924_35061014_35061180_35061576_35061690_35062002_35062139_35062216_35062351_35062977_35063081_35064153_35064286_35065250_35065382_35066674_35066818_35067890_35068064_35068250_35068363_35072336
transcript_19460.known	chr1	+	5505	15	FSM	ENSG00000136643.12	ENST00000366960.8	5505	15	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_8	12.987631478779	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTCTCATTTGATTTTT	213048770	True	NA	5	True	CATAAA	-15	NA	213051240	213274774	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_213051510_213071005_213071042_213077695_213077817_213104453_213104570_213117316_213117411_213129526_213129890_213167857_213167974_213176399_213176493_213230496_213230545_213232122_213232256_213240701_213242298_213242568_213242659_213261557_213261641_213262720_213262817_213272523
transcript_194612.nic	chr9	-	2497	15	NIC	ENSG00000221829.10	novel	2556	14	NA	NA	-136	0	combination_of_known_junctions	FALSE	canonical	3	66	junction_14	65.1555438773953	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCGTCTGCCTACTACATA	NA	False	NA	-40	True	AGTAAA	-13	NA	35080078	35073838	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_35074217_35074370_35074495_35074926_35075083_35075278_35075326_35075464_35075755_35075961_35076029_35076431_35076584_35076723_35076871_35076970_35077102_35077263_35077400_35078140_35078344_35078604_35078737_35079150_35079242_35079440_35079536_35079730
transcript_194627.known	chr9	-	2556	14	FSM	ENSG00000221829.10	ENST00000378643.8	2556	14	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_5	42.1925706464003	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCGTCTGCCTACTACATA	-35077064	True	NA	-40	True	AGTAAA	-13	NA	35079942	35073838	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35074217_35074370_35074495_35074926_35075083_35075278_35075326_35075464_35075755_35075961_35076029_35076431_35076584_35076723_35076871_35076970_35077102_35077263_35077400_35078140_35078344_35078604_35078737_35079150_35079242_35079440
transcript_19465.known	chr1	+	4082	14	FSM	ENSG00000136643.12	ENST00000543354.5	4082	14	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	27.7686980558322	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTCTTCTTCATTTAAT	213048762	True	NA	8	True	AATAAA	-15	NA	213051232	213273464	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_213051510_213071005_213071042_213104453_213104570_213117316_213117411_213129526_213129890_213167857_213167974_213176399_213176493_213230496_213230545_213232122_213232256_213240701_213242298_213242568_213242659_213261557_213261641_213262720_213262817_213272523
transcript_194650.known	chr9	-	2108	13	FSM	ENSG00000221829.10	ENST00000425676.5	2108	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_10	80.5403625519528	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGCCTACTACATATACT	-35076815	False	2878	-36	True	AGTAAA	-17	NA	35079693	35073834	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35074217_35074370_35074495_35074926_35075083_35075278_35075326_35075464_35075755_35075961_35076029_35076431_35076584_35076723_35076871_35076970_35077102_35077263_35077400_35078604_35078737_35079150_35079242_35079440
transcript_194711.known	chr9	-	2588	13	FSM	ENSG00000165282.14	ENST00000298004.9	2588	13	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_12	45.6145535986049	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCTGAGATGTGGGG	-35096210	False	NA	NA	False	AATAAA	-16	NA	35096220	35088687	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35089222_35089379_35089451_35090065_35090281_35090465_35090673_35091239_35091292_35092542_35092768_35093029_35093210_35093420_35093581_35093900_35094025_35094215_35094360_35095054_35095567_35095878_35095977_35096154
transcript_194716.nic	chr9	-	2836	12	NIC	ENSG00000165282.14	novel	2464	12	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_11	42.046019652222	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTCTGAGATGTGGG	-35096557	False	25619	NA	False	AATAAA	-15	NA	35096567	35088688	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_35089222_35089379_35089451_35090065_35090281_35090465_35090673_35091239_35091292_35092542_35092768_35093029_35093210_35093420_35093581_35093900_35094025_35094215_35094360_35095054_35095567_35096154
transcript_194718.known	chr9	-	2464	12	FSM	ENSG00000165282.14	ENST00000361778.6	2464	12	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_11	33.1876707167482	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTCTGAGATGTGGG	-35096591	False	25619	NA	False	AATAAA	-15	NA	35096601	35088688	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35089222_35089379_35089451_35090065_35090281_35090465_35090673_35091239_35091292_35092542_35092768_35093029_35093210_35093420_35093581_35093900_35094025_35094215_35094360_35095054_35095567_35096560
transcript_194727.known	chr9	-	4112	11	FSM	ENSG00000165282.14	ENST00000378617.4	4112	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_10	39.9399549323732	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCTGAGATGTGGGG	-35096581	False	25619	NA	False	AATAAA	-16	NA	35096591	35088687	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35089222_35089379_35089451_35090065_35090281_35090465_35090673_35091239_35092768_35093029_35093210_35093420_35093581_35093900_35094025_35094215_35094360_35095054_35095567_35096154
transcript_194729.nic	chr9	-	3733	11	NIC	ENSG00000165282.14	novel	2464	12	NA	NA	-18	0	intron_retention	FALSE	canonical	3	51	junction_10	28.5159604432325	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTCTGAGATGTGGG	-35096609	False	NA	NA	False	AATAAA	-15	NA	35096619	35088688	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_35089222_35089379_35089451_35090065_35090281_35090465_35090673_35091239_35092768_35093029_35093210_35093420_35093581_35093900_35094025_35094215_35094360_35095054_35095567_35096560
transcript_194737.nnic	chr9	-	1223	10	NNC	ENSG00000165283.16	novel	1365	10	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	24	junction_9	621.840636962379	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACTGTCCTCTTTGATT	-35077562	True	NA	-5	True	AATAAA	-18	NA	35103181	35099895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_35100173_35100597_35100727_35100931_35101012_35101134_35101280_35101425_35101561_35101709_35101812_35101903_35101963_35102094_35102195_35102685_35102791_35103090
transcript_19474.known	chr1	+	8468	5	FSM	ENSG00000117707.16	ENST00000366958.9	8468	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.82915619758885	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGCTTTAGCTCAA	213987781	True	NA	NA	False	NA	NA	NA	213987972	214041510	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_213988484_213996468_213998261_214005164_214005273_214011520_214011716_214035648
transcript_194742.known	chr9	-	1365	10	FSM	ENSG00000165283.16	ENST00000356493.10	1365	10	0	0	0	0	multi-exon	FALSE	canonical	3	1498	junction_9	210.517058925792	5140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCATTTTTGTCTTCAAG	-35077512	True	NA	NA	False	NA	NA	NA	35103131	35099777	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35100173_35100597_35100727_35100931_35101012_35101134_35101280_35101425_35101561_35101709_35101812_35101903_35101963_35102094_35102195_35102685_35102824_35103049
transcript_194749.known	chr9	-	1293	9	FSM	ENSG00000165283.16	ENST00000619795.4	1293	9	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_8	648.143104858024	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTTTTGTCTTCAAGAG	-35103108	False	NA	NA	False	NA	NA	NA	35103195	35099775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35100173_35100597_35100727_35100931_35101012_35101134_35101280_35101425_35101561_35101709_35101812_35101903_35101963_35102094_35102195_35103049
transcript_19475.known	chr1	+	1745	12	FSM	ENSG00000143499.14	ENST00000366957.10	1745	12	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	10.2287877665711	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGGTTTGTATTTTCTT	214281078	True	NA	8	True	ATTAAA	-13	NA	214281158	214337131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_214281428_214305186_214305251_214314761_214314873_214318078_214318140_214318858_214318984_214324640_214324709_214327621_214327725_214330167_214330279_214330949_214331071_214332017_214332193_214334199_214334309_214336703
transcript_194751.known	chr9	-	1296	9	FSM	ENSG00000165283.16	ENST00000452248.6	1296	9	0	0	0	0	multi-exon	TRUE	canonical	3	117	junction_4	630.949965825342	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTTTTGTCTTCAAGAG	-35103108	False	NA	NA	False	NA	NA	NA	35103195	35099775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35100173_35100597_35100727_35100931_35101012_35101134_35101280_35101709_35101812_35101903_35101963_35102094_35102195_35102685_35102824_35103049
transcript_194782.nnic	chr9	-	3069	10	NNC	ENSG00000005238.20	novel	2566	10	NA	NA	-55	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	8.20568908339411	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGCTCTACTTTTGTTGT	-35115468	True	NA	-9	True	AATAAA	-21	NA	35115917	35104120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_35105375_35105681_35105858_35105940_35106010_35106251_35106411_35106537_35106644_35106832_35106892_35107380_35107569_35107682_35108350_35108593_35108738_35115670
transcript_194785.known	chr9	-	2566	10	FSM	ENSG00000005238.20	ENST00000378566.5	2566	10	0	0	0	0	multi-exon	TRUE	canonical	3	3	junction_7	7.94114150453584	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTGTTGTTGTTGTTGT	-35115401	True	NA	0	True	AATAAA	-30	NA	35115850	35104111	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35105375_35105681_35105858_35105940_35106010_35106251_35106411_35106537_35106644_35106832_35106892_35107380_35107569_35108127_35108350_35108593_35108738_35115670
transcript_194788.known	chr9	-	3070	9	FSM	ENSG00000005238.20	ENST00000378557.1	3070	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	8.82379595185655	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTGTTTGGAAACTTGA	-35110974	False	NA	-30	True	ATTAAA	-14	NA	35111423	35104141	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35105375_35105681_35105858_35105940_35106010_35106251_35106411_35106537_35106644_35106832_35106892_35107380_35108350_35108593_35108738_35111268
transcript_19479.known	chr1	+	1618	11	FSM	ENSG00000143499.14	ENST00000460580.5	1618	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	18.2945347030199	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGGTTTGTATTTTCTT	214281204	False	NA	8	True	ATTAAA	-13	NA	214281221	214337131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_214281428_214314761_214314873_214318078_214318140_214318858_214318984_214324640_214324709_214327621_214327725_214330167_214330279_214330949_214331071_214332017_214332193_214334199_214334309_214336703
transcript_194790.nic	chr9	-	3183	9	NIC	ENSG00000005238.20	novel	3256	9	NA	NA	-55	0	intron_retention	FALSE	canonical	3	17	junction_2	4.62162038683404	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGCTCTACTTTTGTTGT	-35115468	True	NA	-9	True	AATAAA	-21	NA	35115917	35104120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_35105375_35105681_35105858_35105940_35106010_35106251_35106411_35106537_35106644_35106832_35106892_35107380_35108350_35108593_35108738_35115670
transcript_194791.known	chr9	-	2998	9	FSM	ENSG00000005238.20	ENST00000322813.10	2998	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	7.07879756738388	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTACTTTTGTTGTTGTT	-35115413	True	NA	-5	True	AATAAA	-25	NA	35115862	35104116	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35105375_35105681_35105858_35105940_35106010_35106251_35106411_35106537_35106644_35106832_35106892_35107380_35108350_35108593_35108738_35115804
transcript_194797.known	chr9	+	6303	39	FSM	ENSG00000198722.15	ENST00000378495.7	6303	39	0	0	0	0	multi-exon	TRUE	canonical	3	143	junction_23	27.5541396058429	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGGTTTGGTAATTCTG	35158673	False	NA	15	True	AATAAA	-17	NA	35162061	35405338	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_35162306_35228014_35228045_35231119_35231220_35236468_35236587_35237702_35237827_35243290_35243365_35258992_35259051_35295695_35295931_35310466_35310782_35313898_35313990_35366946_35366994_35370317_35370397_35375126_35375202_35376027_35376248_35377467_35377696_35378294_35378437_35380469_35380640_35381099_35381216_35381555_35381720_35382356_35382508_35384245_35384315_35385723_35385814_35386164_35386294_35389845_35389974_35390628_35390715_35396475_35396603_35396840_35396938_35397166_35397311_35397634_35397713_35398210_35398289_35398553_35398643_35398881_35399035_35399160_35399285_35399391_35399449_35399648_35399730_35400295_35400444_35403166_35403260_35403439_35403600_35403747
transcript_19480.known	chr1	+	4732	10	FSM	ENSG00000143499.14	ENST00000471645.5	4732	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	11.0699236617306	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGAGGTTTGTATTTTCT	214280747	True	NA	7	True	ATTAAA	-12	NA	214281124	214337130	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_214281428_214305186_214305251_214314761_214314873_214318078_214318140_214318858_214318984_214324640_214324709_214327621_214327725_214330167_214330279_214330949_214334309_214336703
transcript_194802.known	chr9	+	5218	12	FSM	ENSG00000198853.12	ENST00000361226.8	5218	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	5.9153812672718	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTTCTCTTTGTGTTCC	35489416	True	NA	19	True	AATAAA	-21	NA	35490110	35561895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_35490173_35546429_35548536_35555059_35555702_35555951_35556138_35556307_35556449_35557913_35557991_35558196_35558372_35558461_35558568_35559225_35559273_35560028_35560852_35560959_35561098_35561180
transcript_194803.known	chr9	+	5636	12	FSM	ENSG00000198853.12	ENST00000455600.1	5636	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	9.18586769386846	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTCTTTGTGTTCCCCC	35538618	True	NA	22	True	AATAAA	-24	NA	35538631	35561898	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_35539109_35546429_35548536_35555059_35555702_35555951_35556138_35556307_35556449_35557913_35557991_35558196_35558372_35558461_35558568_35559225_35559273_35560028_35560852_35560959_35561098_35561180
transcript_194805.nnic	chr9	+	3534	11	NIC	ENSG00000198853.12	novel	5218	12	NA	NA	-422	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	9.83310734203588	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTTCTCTTTGTGTTCC	35489671	False	NA	19	True	AATAAA	-21	NA	35489688	35561895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_35490173_35555059_35555702_35555951_35556138_35556307_35556449_35557913_35557991_35558196_35558372_35558461_35558568_35559225_35559273_35560028_35560852_35560959_35561098_35561180
transcript_194806.known	chr9	+	2530	10	FSM	ENSG00000107140.16	ENST00000336395.6	2530	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	6.49786289653931	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCTCAGCCCGTGCGCCC	35604835	True	NA	34	True	AATAAA	-30	NA	35605261	35610033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_35605839_35605983_35606106_35606236_35606286_35606836_35606984_35607326_35607410_35607581_35607673_35607927_35608012_35608159_35608250_35608394_35608510_35608861
transcript_194807.known	chr9	+	2226	9	FSM	ENSG00000107140.16	ENST00000498522.5	2226	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	16.0929914869797	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCGTGCGCCCTCCTCCCC	35605476	False	NA	42	True	AATAAA	-38	NA	35605490	35610041	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_35605839_35605983_35606106_35606236_35606286_35606836_35606984_35607581_35607673_35607927_35608012_35608159_35608250_35608394_35608510_35608861
transcript_194813.known	chr9	-	1222	5	FSM	ENSG00000137078.10	ENST00000259608.8	1222	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	7.34846922834953	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGATTTTTACCTAGAAG	-35648164	False	2767	-11	True	AATAAA	-16	NA	35650931	35649294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35650082_35650183_35650246_35650356_35650416_35650501_35650638_35650753
transcript_194817.nic	chr9	-	3290	10	NIC	ENSG00000137135.18	novel	4498	12	NA	NA	-64	0	intron_retention	FALSE	canonical	3	67	junction_1	63.1488541287788	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGACTACTGTCTTTATTTT	NA	False	NA	0	True	NA	NA	NA	35665259	35658874	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_35659174_35660093_35662003_35662178_35662268_35662511_35662742_35662945_35663075_35663321_35663393_35664007_35664127_35664371_35664493_35664755_35664851_35665031
transcript_194824.known	chr9	-	3678	9	FSM	ENSG00000137135.18	ENST00000378387.4	3678	9	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_3	23.7562491778479	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTCACATCTACCTGGG	-35662381	True	NA	0	True	ATTAAA	-18	NA	35665195	35659342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35662003_35662178_35662268_35662511_35662742_35662945_35663075_35663321_35663393_35664007_35664127_35664371_35664493_35664755_35664851_35665031
transcript_194827.nnic	chr9	-	1728	9	NNC	ENSG00000137135.18	novel	3678	9	NA	NA	-64	85	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_2	83.9507854340863	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTTCTGTCTCAGTTTT	NA	False	NA	-4	True	AGTAAA	-25	NA	35665259	35661433	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_35662003_35662178_35662345_35662511_35662742_35662945_35663075_35663321_35663393_35664007_35664127_35664371_35664493_35664755_35664851_35665031
transcript_19483.known	chr1	-	13360	19	FSM	ENSG00000152104.12	ENST00000366956.10	13360	19	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_8	9.53939201416946	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACATCTTCTCTTTTCTG	-214550721	True	NA	-4	True	AATAAA	-19	NA	214551602	214348699	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_214358051_214364511_214364676_214369456_214369692_214372710_214372840_214376218_214376438_214377958_214378103_214383310_214384789_214386843_214386923_214390987_214391046_214393694_214393778_214394898_214394987_214397912_214398002_214401684_214401773_214402882_214402954_214411683_214411752_214414628_214414727_214451804_214451975_214464629_214464958_214551182
transcript_194835.known	chr9	-	2862	8	FSM	ENSG00000137135.18	ENST00000475323.5	2862	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	107.40805275173	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGGACTACTGTCTTTATT	-35662378	True	NA	-2	True	NA	NA	NA	35665192	35658876	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35659174_35660093_35662003_35662178_35662268_35663321_35663393_35664007_35664127_35664371_35664493_35664755_35664851_35665031
transcript_194855.known	chr9	+	1173	6	FSM	ENSG00000159884.12	ENST00000378409.7	1173	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_5	43.4649283906002	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAACATAAAAATAGCCACA	35656557	True	NA	NA	False	AATAAA	-16	NA	35658289	35661499	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_35658486_35658575_35658728_35660400_35660462_35660556_35660648_35660745_35660859_35660939
transcript_194863.known	chr9	+	1264	5	FSM	ENSG00000159884.12	ENST00000426546.7	1264	5	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_4	17.6405073623181	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCCACATTTACAAAGCTG	35656559	True	NA	NA	False	AATAAA	-28	NA	35658291	35661511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_35658486_35658575_35658728_35660400_35660462_35660556_35660648_35660745
transcript_194866.known	chr9	+	899	5	FSM	ENSG00000159884.12	ENST00000378407.7	899	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	77.6768144300473	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGAGTGCTCCTGTGTGTT	35656571	True	NA	14	True	ACTAAA	-19	NA	35658303	35661186	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_35658486_35658575_35658728_35660400_35660462_35660556_35660648_35660773
transcript_194867.known	chr9	+	1324	3	FSM	ENSG00000159884.12	ENST00000421582.2	1324	3	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_2	7	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTCATAGCAAAACTGAGA	35656584	True	NA	NA	False	NA	NA	NA	35658316	35661403	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_35658486_35658575_35658728_35660400
transcript_194868.known	chr9	-	1182	9	FSM	ENSG00000198467.16	ENST00000378292.9	1182	9	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_3	172.649029826408	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGTGTTGGCAATGGA	-35690037	False	NA	0	True	AATAAA	-38	NA	35690056	35681992	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35682164_35684245_35684316_35684487_35684551_35685063_35685140_35685268_35685340_35685433_35685552_35685646_35685781_35689145_35689272_35689703
transcript_194869.known	chr9	-	1018	9	FSM	ENSG00000198467.16	ENST00000329305.6	1018	9	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_4	112.665364575809	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAAGGCCCTTTAATCCT	-35676452	True	NA	-21	True	AATAAA	-17	NA	35689913	35682013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35682164_35684245_35684316_35684487_35684551_35684731_35684808_35685268_35685340_35685433_35685552_35685646_35685781_35689145_35689272_35689703
transcript_194870.known	chr9	-	1190	9	FSM	ENSG00000198467.16	ENST00000645482.3	1190	9	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	199.280228259103	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCATGCTGTTTTCCTGC	-35676464	True	NA	-13	True	AATAAA	-13	NA	35689925	35682931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35683242_35684245_35684316_35684487_35684551_35684731_35684808_35685268_35685340_35685433_35685552_35685646_35685781_35689145_35689272_35689703
transcript_194871.known	chr9	-	1185	9	FSM	ENSG00000198467.16	ENST00000647435.1	1185	9	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	223.560953656939	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTCTCCATGCTGTTTT	-35676464	True	NA	-18	True	AATAAA	-8	NA	35689925	35682936	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35683242_35684245_35684316_35684487_35684551_35685063_35685140_35685268_35685340_35685433_35685552_35685646_35685781_35689145_35689272_35689703
transcript_194872.known	chr9	-	8623	57	FSM	ENSG00000137076.21	ENST00000314888.10	8623	57	0	0	0	0	multi-exon	TRUE	canonical	3	231	junction_48	46.8515859890984	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCCTGTAAGTGTCTGAG	-35728601	True	NA	NA	False	NA	NA	NA	35732195	35696947	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35697917_35698043_35698173_35698322_35698506_35698616_35698680_35698807_35698934_35699031_35699157_35699355_35699462_35699973_35700082_35700190_35700377_35703559_35703677_35703774_35703901_35703990_35704175_35704331_35704499_35704668_35704816_35705550_35705671_35705749_35705852_35705961_35706112_35706195_35706367_35706449_35706552_35706767_35706901_35707071_35707254_35707347_35707489_35707730_35707893_35708340_35708485_35710560_35710684_35710796_35710887_35710988_35711083_35711254_35711395_35711594_35711793_35712004_35712125_35712834_35713044_35713195_35713299_35713952_35714082_35714238_35714374_35714573_35714688_35714759_35714877_35715058_35715188_35716389_35716557_35717145_35717441_35717618_35717787_35718811_35718911_35719073_35719283_35719518_35719628_35719739_35719854_35720038_35720220_35720432_35720510_35720811_35720914_35721647_35721804_35722118_35722224_35722860_35722922_35723951_35724080_35724191_35724335_35724571_35724725_35724829_35724960_35725223_35725322_35725564_35725728_35732074
transcript_194874.nic	chr9	-	1386	9	ISM	ENSG00000137076.21	ENST00000314888.10	8623	57	-283	25170	-283	986	5prime_fragment	FALSE	canonical	3	254	junction_3	16.7238602003246	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTATGGGCCCTTTTCA	-35732468	False	NA	NA	False	NA	NA	NA	35732478	35722117	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_35722224_35722860_35722922_35723951_35724080_35724191_35724335_35724571_35724725_35724829_35724960_35725223_35725322_35725564_35725728_35732074
transcript_194875.nic	chr9	-	969	5	ISM	ENSG00000137076.21	ENST00000378192.2	1693	7	-439	1512	-348	-1512	5prime_fragment	FALSE	canonical	3	269	junction_2	13.5922772190682	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGATGGAGAAACTAAAGC	-35732533	False	NA	-1	True	AAGAAA	-28	NA	35732543	35724615	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_35724725_35724829_35724960_35725223_35725322_35725564_35725728_35732074
transcript_194876.nic	chr9	-	794	5	ISM	ENSG00000137076.21	ENST00000378192.2	1693	7	-318	1566	-227	-1566	5prime_fragment	FALSE	canonical	3	269	junction_2	13.5922772190682	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGGAAATAACAGGGACCT	-35732412	False	NA	5	True	NA	NA	NA	35732422	35724669	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_35724725_35724829_35724960_35725223_35725322_35725564_35725728_35732074
transcript_194877.nnic	chr9	-	822	2	NNC	ENSG00000137076.21	novel	8623	57	NA	NA	-355	-5950	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_1	0	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTTTTTATTATCTCT	-35732540	False	NA	-12	True	AATAAA	-12	NA	35732550	35729053	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_35729400_35732074
transcript_194884.known	chr9	-	3611	17	FSM	ENSG00000070610.14	ENST00000378103.7	3611	17	0	0	0	0	multi-exon	TRUE	canonical	3	244	junction_14	79.6193090587955	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGTGGTGTGTTTGAG	-35744769	True	NA	-4	True	AATAAA	-16	NA	35749228	35736865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35737448_35737747_35737940_35738036_35738153_35738231_35738375_35738525_35738633_35738751_35738904_35739001_35739110_35739314_35739420_35739627_35739801_35739997_35740124_35740208_35740363_35740525_35740629_35740824_35741065_35741671_35741891_35744296_35744413_35744614_35744707_35748345
transcript_194890.nnic	chr9	-	3995	17	NNC	ENSG00000070610.14	novel	3611	17	NA	NA	-450	0	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_5	124.727061393067	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGTGGTGTGTTTGAG	-35749624	False	NA	-4	True	AATAAA	-16	NA	35749678	35736865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_35737448_35737747_35737940_35738036_35738153_35738231_35738375_35738525_35738633_35738817_35738904_35739001_35739110_35739314_35739420_35739627_35739801_35739997_35740124_35740208_35740363_35740525_35740629_35740824_35741065_35741671_35741891_35744296_35744413_35744614_35744707_35748345
transcript_194896.nnic	chr9	-	3421	16	NIC	ENSG00000070610.14	novel	3611	17	NA	NA	-29	0	combination_of_known_splicesites	FALSE	canonical	3	115	junction_13	98.1097797820833	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGTGGTGTGTTTGAG	-35749203	False	NA	-4	True	AATAAA	-16	NA	35749257	35736865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_35737448_35737747_35737940_35738036_35738153_35738231_35738375_35738525_35738633_35738751_35738904_35739001_35739110_35739314_35739420_35739627_35739801_35739997_35740124_35740208_35740363_35740525_35740629_35740824_35741065_35744296_35744413_35744614_35744707_35748345
transcript_194901.nnic	chr9	-	3353	16	NNC	ENSG00000070610.14	novel	3611	17	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_5	139.695319256667	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGTGGTGTGTTTGAG	-35744796	True	NA	-4	True	AATAAA	-16	NA	35749255	35736865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_35737448_35737747_35737940_35738036_35738153_35738231_35738375_35738525_35738633_35738817_35738904_35739001_35739110_35739314_35739420_35739627_35739801_35739997_35740124_35740208_35740363_35740525_35740629_35740824_35741065_35744296_35744413_35744614_35744707_35748345
transcript_19493.nic	chr1	-	3535	14	ISM	ENSG00000152104.12	ENST00000366956.10	13360	19	-273	29259	-273	-5713	5prime_fragment	FALSE	canonical	3	32	junction_3	6.23124404648573	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGGCAGGCTTGTCAA	-214551845	False	NA	NA	False	NA	NA	NA	214551875	214377958	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_214378103_214383310_214384789_214386843_214386923_214390987_214391046_214393694_214393778_214394898_214394987_214397912_214398002_214401684_214401773_214402882_214402954_214411683_214411752_214414628_214414727_214451804_214451975_214464629_214464958_214551182
transcript_194940.known	chr9	+	1496	9	FSM	ENSG00000107175.12	ENST00000353704.3	1496	9	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_5	28.577744837548	173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCCTAGGTCACCCTCA	35729792	True	NA	4	True	AATAAA	-14	NA	35732665	35736999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_35732902_35732995_35733144_35733214_35733283_35733395_35733486_35735108_35735216_35735305_35735375_35736047_35736133_35736226_35736312_35736391
transcript_194944.known	chr9	-	836	3	FSM	ENSG00000070610.14	ENST00000489025.1	836	3	0	0	0	0	multi-exon	FALSE	canonical	3	465	junction_1	13.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGCCAGGAGGTGGAG	-35748919	False	NA	NA	False	NA	NA	NA	35748973	35744296	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35744413_35744614_35744707_35748345
transcript_194946.known	chr9	-	3757	17	FSM	ENSG00000070610.14	ENST00000378094.4	3757	17	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	132.439077975498	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAAGTGTGGTGTGTTTGA	-35744759	True	NA	-5	True	AATAAA	-15	NA	35749218	35736866	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35737605_35737747_35737940_35738036_35738153_35738231_35738375_35738525_35738633_35738751_35738904_35739001_35739110_35739314_35739420_35739627_35739801_35739997_35740124_35740208_35740363_35740525_35740629_35740824_35741065_35741671_35741891_35744296_35744413_35744614_35744707_35748345
transcript_194947.known	chr9	+	7028	9	FSM	ENSG00000107185.10	ENST00000378078.5	7028	9	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	6.30352084156148	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAAGAAAATGTCT	35747625	True	NA	NA	False	AATGAA	-9	NA	35749286	35758585	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_35749409_35749736_35749872_35750242_35750380_35750657_35750742_35750839_35750990_35751265_35751413_35751626_35751755_35751955_35752146_35752650
transcript_194954.known	chr9	-	515	3	FSM	ENSG00000215183.5	ENST00000414286.1	515	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCGACTCTCACTGTCC	-35756559	False	NA	-3	True	AATAAA	-17	NA	35756613	35752991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35753281_35753659_35753769_35756496
transcript_194955.known	chr9	+	4248	22	FSM	ENSG00000159899.16	ENST00000342694.7	4248	22	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	10.0443461155462	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTGGGATAGGGGCAAT	35791249	True	NA	18	True	AATAAA	-17	NA	35791590	35809731	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_35793076_35793897_35794104_35799617_35799732_35800021_35800158_35800388_35800484_35800708_35800842_35801069_35801155_35801642_35801764_35801925_35802001_35802205_35802284_35802502_35802608_35802731_35802804_35805510_35805671_35805829_35805986_35806064_35806234_35806391_35806539_35807022_35807147_35807329_35807399_35808508_35808684_35808754_35808854_35809155_35809248_35809379
transcript_194958.known	chr9	+	3441	14	FSM	ENSG00000137103.20	ENST00000650015.1	3441	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	13.8196327201815	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTCCTGAGTGCCAGAAA	35828757	True	NA	22	True	AAGAAA	-36	NA	35829231	35854847	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_35829320_35829876_35829956_35834460_35834651_35835010_35835219_35841133_35841268_35841525_35841795_35842391_35842718_35845974_35846069_35846257_35846382_35846468_35846612_35846816_35846996_35852826_35852974_35853140_35853258_35853504
transcript_194959.known	chr9	+	3731	13	FSM	ENSG00000137103.20	ENST00000377988.6	3731	13	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_3	11.3733973229931	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTCCTGAGTGCCAGAA	35829023	False	NA	21	True	AAGAAA	-35	NA	35829497	35854846	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_35829956_35834460_35834651_35835010_35835219_35841133_35841268_35841525_35841795_35842391_35842718_35845974_35846069_35846257_35846382_35846468_35846612_35846816_35846996_35852826_35852974_35853140_35853258_35853504
transcript_194966.known	chr9	-	569	5	FSM	ENSG00000137133.11	ENST00000472085.5	569	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	190.354110804049	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGCTCTCCTGTCTTTAA	-35812960	True	NA	0	True	AATAAA	-16	NA	35814992	35812959	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35813146_35813265_35813339_35813444_35813520_35813643_35813785_35814898
transcript_194968.known	chr9	-	649	5	FSM	ENSG00000137133.11	ENST00000259667.6	649	5	0	0	0	0	multi-exon	FALSE	canonical	3	430	junction_4	10.7092249953019	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGCTCTCCTGTCTTTAA	-35813010	True	NA	0	True	AATAAA	-16	NA	35815042	35812959	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35813146_35813265_35813339_35813444_35813550_35813643_35813785_35814898
transcript_194969.known	chr9	-	853	5	FSM	ENSG00000137133.11	ENST00000474848.6	853	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	177.27291812344	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGCTCTCCTGTCTTTAA	-35815342	False	NA	0	True	AATAAA	-16	NA	35815354	35812959	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35813146_35813265_35813339_35813444_35813550_35813643_35813785_35815006
transcript_194972.known	chr9	-	734	4	FSM	ENSG00000137133.11	ENST00000461169.1	734	4	0	0	0	0	multi-exon	FALSE	canonical	3	430	junction_3	12.0369800568452	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTCTCCCTTAATTATGC	-35812989	True	NA	-14	True	AATAAA	-2	NA	35815021	35812973	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35813339_35813444_35813550_35813643_35813785_35814898
transcript_194973.known	chr9	-	2167	3	FSM	ENSG00000137133.11	ENST00000474908.5	2167	3	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_1	5.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGCTCTCCTGTCTTTAA	-35815340	False	NA	0	True	AATAAA	-16	NA	35815352	35812959	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_35813146_35813265_35813339_35813444
transcript_194975.known	chr9	+	4412	21	FSM	ENSG00000122707.12	ENST00000377966.4	4412	21	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_16	58.2756166848537	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGCTTCTAAGCAATGT	36033520	True	NA	8	True	AATAAA	-20	NA	36036912	36124455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_36037099_36052264_36052324_36058826_36058902_36060118_36060156_36063794_36063881_36065576_36065625_36080604_36080639_36083364_36083563_36087693_36087962_36091163_36091344_36100330_36100544_36102093_36102231_36105142_36105284_36107975_36108165_36109956_36110080_36112304_36112477_36116984_36117178_36118756_36118968_36120662_36120737_36121532_36121689_36122823
transcript_194977.nic	chr9	+	2119	15	ISM	ENSG00000122707.12	ENST00000377966.4	4412	21	-15	14246	-15	-14246	5prime_fragment	TRUE	canonical	3	51	junction_13	58.2941170413675	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTTTTCCTCCCTGGAT	36033505	True	NA	16	True	AATAAA	-24	NA	36036897	36110209	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_36037099_36052264_36052324_36058826_36058902_36060118_36060156_36063794_36063881_36065576_36065625_36080604_36080639_36083364_36083563_36087693_36087962_36091163_36091344_36100330_36100544_36102093_36102231_36105142_36105284_36107975_36108165_36109956
transcript_194984.known	chr9	+	1717	9	FSM	ENSG00000122707.12	ENST00000479053.1	1717	9	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_8	52.1989882564787	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTCGCTACTGTACTATT	36033547	True	NA	18	True	ATTAAA	-27	NA	36036939	36086195	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_36037099_36052264_36052324_36058826_36058902_36060118_36060156_36063794_36063881_36065576_36065625_36080604_36080639_36083364_36083563_36085174
transcript_194986.nnic	chr9	+	1038	9	NNC	ENSG00000122707.12	novel	1717	9	NA	NA	-15	-616	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_8	51.5944219368722	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAATAATAATTAGCTGG	36033505	True	NA	NA	False	NA	NA	NA	36036897	36085565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_36037099_36052264_36052324_36058826_36058902_36060118_36060156_36063794_36063881_36065576_36065625_36080604_36080639_36083364_36083563_36085265
transcript_194988.nnic	chr9	+	1655	9	NNC	ENSG00000122707.12	novel	1717	9	NA	NA	-15	1	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_8	51.5944219368722	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATCTTGTCAGAGTTCG	36033505	True	NA	5	True	ATTAAA	-14	NA	36036897	36086182	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_36037099_36052264_36052324_36058826_36058902_36060118_36060156_36063794_36063881_36065576_36065625_36080604_36080639_36083364_36083563_36085265
transcript_194989.nic	chr9	+	1018	9	NIC	ENSG00000122707.12	novel	1128	11	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_8	48.5938203375697	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATATCTTGTCAGAGTTC	36033505	True	NA	4	True	ATTAAA	-13	NA	36036897	36086181	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_36037099_36052264_36052324_36058826_36058902_36060118_36060156_36063794_36063881_36065576_36065625_36080604_36080639_36083364_36083563_36085901
transcript_194993.nic	chr9	+	2455	2	ISM	ENSG00000122707.12	ENST00000475774.5	1128	11	-26	31663	-15	-31663	5prime_fragment	FALSE	canonical	3	219	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAATTAGTGGAGATTTTA	36033505	True	NA	NA	False	TTTAAA	-17	NA	36036897	36054518	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_36037099_36052264
transcript_194996.known	chr9	+	1895	5	FSM	ENSG00000122694.16	ENST00000377960.9	1895	5	0	0	0	0	multi-exon	TRUE	canonical	3	49	junction_4	2.58602010819715	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCTCCTCCAATGTGATT	36136077	True	NA	4	True	AATAAA	-19	NA	36136732	36163906	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_36136792_36147785_36147895_36148546_36148651_36150871_36150950_36162361
transcript_195.known	SIRV5	+	2473	1	FSM	SIRV5A	SIRV504	2473	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1769	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCATGTAAAACATTTGTT	NA	False	NA	NA	False	NA	NA	NA	11133	13606	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV5_+_11100_13600
transcript_195002.known	chr9	+	1078	5	FSM	ENSG00000122705.17	ENST00000345519.10	1078	5	0	0	0	0	multi-exon	FALSE	canonical	3	1458	junction_1	75.8102070964062	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGAAGCTTCTTTATT	36152098	True	NA	37	True	AATAAA	-19	NA	36190920	36212059	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_36191274_36197550_36197589_36198978_36199097_36204067_36204180_36211602
transcript_195005.known	chr9	+	989	3	FSM	ENSG00000122705.17	ENST00000540080.5	989	3	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	778.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGAAGCTTCTTTATTGA	36152033	True	NA	39	True	AATAAA	-21	NA	36190855	36212061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_36191274_36204067_36204180_36211602
transcript_195006.known	chr9	-	5263	12	FSM	ENSG00000159921.20	ENST00000642385.2	5263	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	4.17390555754509	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTGTATTTTGTTTTG	-36257710	True	NA	0	True	AATAAA	-19	NA	36258448	36214440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_36217601_36218182_36218300_36219837_36220021_36222776_36222999_36223372_36223503_36227247_36227459_36229020_36229109_36233919_36234133_36236831_36236985_36246030_36246483_36249191_36249398_36258320
transcript_195009.known	chr9	-	5254	12	FSM	ENSG00000137075.18	ENST00000357058.7	5254	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_11	49.633200032383	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATCTGTTGTGTTTCA	-36400694	False	NA	-9	True	AATAAA	-17	NA	36400923	36336403	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_36339815_36342324_36342425_36344831_36344954_36351114_36351200_36352741_36352849_36353169_36353332_36356302_36356474_36357774_36357943_36369718_36369933_36375933_36376128_36390466_36390617_36400553
transcript_19501.known	chr1	-	5552	2	FSM	ENSG00000152104.12	ENST00000491277.1	5552	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATATAGTGTCTTTTTTT	-214550721	True	NA	NA	False	AATAAA	-19	NA	214551602	214528275	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_214533408_214551182
transcript_195011.known	chr9	-	5104	11	FSM	ENSG00000137075.18	ENST00000350199.8	5104	11	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_10	37.7201537642677	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATCTGTTGTGTTTCA	-36400694	False	NA	-9	True	AATAAA	-17	NA	36400923	36336403	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_36339815_36342324_36342425_36344831_36344954_36351114_36351200_36352741_36352849_36353169_36353332_36356302_36356474_36357774_36357943_36369718_36369933_36375933_36376128_36400553
transcript_195014.known	chr9	-	5061	12	FSM	ENSG00000137075.18	ENST00000259605.11	5061	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	51.7414104341871	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTTGTGTTTCATGTC	-36400040	False	NA	-5	True	AATAAA	-21	NA	36400269	36336399	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_36339815_36342324_36342425_36344831_36344954_36351114_36351200_36352741_36352849_36353169_36353332_36356302_36356474_36357774_36357943_36369718_36369933_36375933_36376128_36390466_36390617_36400096
transcript_195015.nnic	chr9	+	2595	19	NNC	ENSG00000165304.8	novel	2452	18	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	113.502556125021	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCTTCTCTTTTTTGTA	NA	False	NA	10	True	AATAAA	-17	NA	36572834	36677682	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_36573008_36580072_36580156_36581643_36581740_36583626_36583713_36589535_36589653_36594627_36594772_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_195024.known	chr9	+	2452	18	FSM	ENSG00000165304.8	ENST00000298048.7	2452	18	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_2	74.8205234320343	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCTTCTCTTTTTTGTA	36568320	True	NA	10	True	AATAAA	-17	NA	36572894	36677682	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_36573008_36581643_36581740_36583626_36583713_36589535_36589653_36594627_36594772_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_195032.nic	chr9	+	2681	18	NIC	ENSG00000165304.8	novel	2452	18	NA	NA	-5	0	combination_of_known_junctions	TRUE	canonical	3	39	junction_1	96.5688523934874	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCTTCTCTTTTTTGTA	36568282	True	NA	10	True	AATAAA	-17	NA	36572856	36677682	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_36573199_36581643_36581740_36583626_36583713_36589535_36589653_36594627_36594772_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_195038.known	chr9	+	2363	17	FSM	ENSG00000165304.8	ENST00000541717.4	2363	17	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_12	99.9229195117417	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTCTCTTTTTTGTAT	36568287	True	NA	11	True	AATAAA	-18	NA	36572861	36677683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_36573008_36581643_36581740_36583626_36583713_36589535_36589653_36594627_36594772_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_19504.nic	chr1	+	2029	12	ISM	ENSG00000117724.14	ENST00000366955.8	10290	20	-40	24412	-40	-14260	5prime_fragment	FALSE	canonical	3	126	junction_11	36.1644544904944	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATATGAAGAATTGAAAGA	214591351	True	NA	16	True	AAAAAG	-4	NA	214603154	214640159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_214603322_214613713_214613917_214614831_214615029_214618572_214618695_214619128_214619221_214620654_214620947_214622078_214622282_214629045_214629172_214630533_214630663_214632479_214632603_214637865_214638002_214639920
transcript_195040.known	chr9	+	2342	17	FSM	ENSG00000165304.8	ENST00000536860.5	2342	17	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	98.925792895483	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTCTCTTTTTTGTAT	36568287	True	NA	11	True	AATAAA	-18	NA	36572861	36677683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_36573008_36581643_36581740_36583626_36583713_36589535_36589653_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_195042.known	chr9	+	2400	17	FSM	ENSG00000165304.8	ENST00000543751.5	2400	17	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_2	87.6815972710352	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTCTCTTTTTTGTAT	36568287	True	NA	11	True	AATAAA	-18	NA	36572861	36677683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_36573008_36581643_36581740_36589535_36589653_36594627_36594772_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_195055.known	chr9	+	2236	16	FSM	ENSG00000165304.8	ENST00000545008.5	2236	16	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	104.854481173778	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGGCTTCTCTTTTTTGT	36568322	True	NA	9	True	AATAAA	-16	NA	36572896	36677681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_36573008_36581643_36581740_36583626_36583713_36589535_36589653_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_195058.nic	chr9	+	2292	16	NIC	ENSG00000165304.8	novel	2452	18	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_11	111.516097492694	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCTTCTCTTTTTTGTA	36568271	True	NA	10	True	AATAAA	-17	NA	36572845	36677682	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_36573008_36581643_36581740_36589535_36589653_36594627_36594772_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_19506.nic	chr1	+	3632	12	ISM	ENSG00000117724.14	ENST00000366955.8	10290	20	-40	22809	-40	-12657	5prime_fragment	FALSE	canonical	3	126	junction_11	36.1644544904944	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCAAAAGGAAGTTAATGAC	214591351	True	NA	31	True	AAGAAA	-31	NA	214603154	214641762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_214603322_214613713_214613917_214614831_214615029_214618572_214618695_214619128_214619221_214620654_214620947_214622078_214622282_214629045_214629172_214630533_214630663_214632479_214632603_214637865_214638002_214639920
transcript_195061.known	chr9	+	2283	16	FSM	ENSG00000165304.8	ENST00000536329.5	2283	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	105.475979361285	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTCTCTTTTTTGTAT	36568287	True	NA	11	True	AATAAA	-18	NA	36572861	36677683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_36573008_36581643_36581740_36594627_36594772_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_195063.known	chr9	+	1966	16	FSM	ENSG00000165304.8	ENST00000626154.2	1966	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	124.611502946825	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTCATTGGAACTACCA	36568355	True	NA	NA	False	CATAAA	-25	NA	36572929	36677417	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_36573008_36589535_36589653_36594627_36594772_36597221_36597291_36599393_36599487_36607578_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_195085.nic	chr9	-	2498	5	NIC	ENSG00000196092.14	novel	1399	7	NA	NA	-1059	852	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	0.866025403784439	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGAGCTGTGGTCTAGGGC	-37027503	True	NA	NA	False	AAAAAG	-1	NA	37027634	37001809	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_37002777_37006472_37006538_37014996_37015195_37020635_37020802_37026532
transcript_195086.known	chr9	+	4429	3	FSM	ENSG00000281649.3	ENST00000658888.2	4447	3	18	0	3	0	multi-exon	FALSE	canonical	2	11	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTCCAAATTCAGATCAG	37074708	True	NA	-45	True	NA	NA	NA	37079876	37090342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_37080537_37084198_37084293_37086667
transcript_195089.known	chr9	+	4520	2	FSM	ENSG00000281649.3	ENST00000625445.1	4520	2	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTGTACCCTCTTTCT	NA	False	NA	6	True	AATATA	-19	NA	37079856	37090507	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_37080537_37086667
transcript_195093.known	chr9	+	579	2	FSM	ENSG00000281649.3	ENST00000627197.1	579	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCCGTGCCAGCAGTCT	37074768	True	NA	NA	False	NA	NA	NA	37079936	37087152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_37080031_37086667
transcript_195098.known	chr9	+	311	2	FSM	ENSG00000281649.3	ENST00000625218.1	311	2	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAATCAGTGTTTGATCC	37074766	True	NA	NA	False	NA	NA	NA	37079934	37086874	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_37080039_37086667
transcript_195100.known	chr9	+	636	2	FSM	ENSG00000281649.3	ENST00000631093.1	636	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTCAGAAGCAATTCAAGAC	37074739	True	NA	NA	False	NA	NA	NA	37079907	37087176	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_37080035_37086667
transcript_195105.known	chr9	+	2584	9	FSM	ENSG00000147905.18	ENST00000336755.10	2584	9	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	35.8780486509509	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGTGTTTATTATGTAA	37115043	True	NA	7	True	AATAAA	-16	NA	37120573	37358149	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_37120624_37126311_37126943_37302187_37302232_37304187_37304314_37305543_37305715_37327798_37327835_37349356_37349453_37354709_37354825_37356834
transcript_195107.nnic	chr9	+	2724	9	NIC	ENSG00000147905.18	novel	2793	9	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_1	46.7103775942777	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGTGTTTATTATGTAA	37115056	True	NA	7	True	AATAAA	-16	NA	37120586	37358149	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_37120777_37126311_37126943_37302187_37302232_37304187_37304314_37305543_37305715_37327798_37327835_37349356_37349453_37354709_37354825_37356834
transcript_195108.nic	chr9	+	3613	9	NIC	ENSG00000147905.18	novel	2793	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	51.2224011053758	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGTGTTTATTATGTAA	37115063	True	NA	7	True	AATAAA	-16	NA	37120593	37358149	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_37121673_37126311_37126943_37302187_37302232_37304187_37304314_37305543_37305715_37327798_37327835_37349356_37349453_37354709_37354825_37356834
transcript_195109.known	chr9	+	2793	9	FSM	ENSG00000147905.18	ENST00000461038.5	2793	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	54.1335154964094	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGTGTTTATTATGTAA	37115105	False	NA	7	True	AATAAA	-16	NA	37120635	37358149	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_37120895_37126311_37126943_37302187_37302232_37304187_37304314_37305543_37305715_37327798_37327835_37349356_37349453_37354709_37354825_37356834
transcript_19511.nic	chr1	+	1389	8	ISM	ENSG00000117724.14	ENST00000366955.8	10290	20	-40	35413	-40	13968	5prime_fragment	FALSE	canonical	3	177	junction_2	24.8103006916112	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTTTCAAGAGGTAAGGT	214591351	True	NA	38	True	AAAAAG	-5	NA	214603154	214629158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_214603322_214613713_214613917_214614831_214615029_214618572_214618695_214619128_214619221_214620654_214620947_214622078_214622282_214629045
transcript_195111.nic	chr9	+	1343	8	ISM	ENSG00000147905.18	ENST00000336755.10	2584	9	-96	3347	-96	0	5prime_fragment	FALSE	canonical	3	67	junction_1	37.9580864445326	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGACTAAAACAAAAAATAAA	37114947	True	NA	NA	False	NA	NA	NA	37120477	37354802	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_37120624_37126311_37126943_37302187_37302232_37304187_37304314_37305543_37305715_37327798_37327835_37349356_37349453_37354709
transcript_19513.known	chr1	+	10290	20	FSM	ENSG00000117724.14	ENST00000366955.8	10290	20	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_11	106.127660543376	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGATTCCTAAGTGTAAA	214591391	True	NA	27	True	AATAAA	-24	NA	214603194	214664571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_214603322_214613713_214613917_214614831_214615029_214618572_214618695_214619128_214619221_214620654_214620947_214622078_214622282_214629045_214629172_214630533_214630663_214632479_214632603_214637865_214638002_214639920_214643325_214644556_214647401_214648674_214648828_214651709_214651887_214652827_214652990_214655240_214655404_214656932_214657410_214658849_214659029_214663590
transcript_195130.known	chr9	+	1704	9	FSM	ENSG00000137106.18	ENST00000607784.1	1704	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	177.020081841016	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTCAGCAACCAAAAACCAT	37415004	True	NA	-10	True	NA	NA	NA	37422745	37434879	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_37422834_37424844_37424976_37425921_37425995_37426537_37426655_37428483_37428573_37429731_37429837_37430510_37430647_37432007_37432139_37434045
transcript_195132.known	chr9	+	1250	9	FSM	ENSG00000137106.18	ENST00000318158.11	1250	9	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_1	58.6662967554626	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGTCTTGGCCTGTAAAT	37414954	True	NA	14	True	ATTAAA	-14	NA	37422695	37436990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_37422834_37424844_37424976_37425921_37425995_37426537_37426655_37428483_37428573_37429731_37429837_37430510_37430647_37432007_37432139_37436660
transcript_195137.known	chr9	+	1080	9	FSM	ENSG00000137106.18	ENST00000460882.5	1080	9	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	139.061081453439	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTGGATCCACAGGCAG	37414954	True	NA	NA	False	NA	NA	NA	37422695	37436848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_37422806_37424844_37424976_37425921_37425995_37426537_37426655_37428483_37428573_37429731_37429837_37430510_37430647_37432007_37432139_37436660
transcript_19515.nic	chr1	+	1186	7	ISM	ENSG00000117724.14	ENST00000366955.8	10290	20	-40	42380	-40	7001	5prime_fragment	FALSE	canonical	3	177	junction_2	20.8626460450251	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGGAATTAATTGAAAAAGA	214591351	True	NA	5	True	NA	NA	NA	214603154	214622191	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_214603322_214613713_214613917_214614831_214615029_214618572_214618695_214619128_214619221_214620654_214620947_214622078
transcript_195151.known	chr9	+	602	6	FSM	ENSG00000137106.18	ENST00000491488.5	602	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	217.543191113857	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACCCGCAACACCATGTC	37414983	True	NA	NA	False	NA	NA	NA	37422724	37436692	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_37422834_37428483_37428573_37429731_37429837_37430510_37430647_37432007_37432139_37436660
transcript_195153.known	chr9	+	1136	5	FSM	ENSG00000137106.18	ENST00000493368.5	1136	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	168.701474504522	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACGAACAGCCCTGCCTC	37414924	True	NA	NA	False	NA	NA	NA	37422665	37429158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_37422806_37424844_37424976_37425921_37425995_37426537_37426655_37428483
transcript_195156.known	chr9	-	4690	2	FSM	ENSG00000168795.5	ENST00000307750.5	4690	2	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTTCTTTTTCTTTAC	-37465147	True	NA	0	True	AATAAA	-27	NA	37465450	37438101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_37442556_37465214
transcript_195161.known	chr9	+	1855	12	FSM	ENSG00000137054.16	ENST00000377798.9	1855	12	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_3	9.82827763762879	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTCCTTTGGTATTAT	37482438	True	NA	14	True	TATAAA	-23	NA	37485947	37503697	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_37486124_37486702_37486807_37487862_37487940_37489314_37489401_37492656_37492716_37493558_37493704_37495168_37495277_37495889_37495987_37498090_37498225_37500839_37500922_37501712_37501845_37503042
transcript_195169.known	chr9	-	4702	11	FSM	ENSG00000147912.13	ENST00000432825.7	4702	11	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	7.60591874792257	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGGAAGCCTTTCCTTA	-37575257	True	NA	1	True	AATAAA	-23	NA	37576380	37510891	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_37512722_37515903_37516086_37518124_37518439_37521568_37521839_37522824_37522978_37525101_37525173_37529123_37529261_37531908_37532059_37537109_37537944_37541183_37541775_37576210
transcript_195183.known	chr9	-	789	2	FSM	ENSG00000175768.13	ENST00000401811.3	789	2	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTATTAGTCTATGTTT	-37583582	True	NA	54	True	NA	NA	NA	37592604	37588457	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_37588933_37592290
transcript_195184.known	chr9	-	706	2	FSM	ENSG00000175768.13	ENST00000321301.7	706	2	0	0	0	0	multi-exon	FALSE	canonical	3	4980	junction_1	0	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGTTTCTATTTTTCTT	-37583575	True	NA	99	True	AATAAA	-18	NA	37592597	37588412	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_37588933_37592411
transcript_195187.known	chr9	+	2293	9	FSM	ENSG00000165275.10	ENST00000297994.4	2293	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	8.89873586527884	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGATTAAGTCTGTCTT	37751973	True	NA	8	True	ATTAAA	-17	NA	37753804	37778972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_37753853_37761902_37762118_37762576_37762686_37763628_37763754_37768075_37768229_37769940_37770020_37770671_37770740_37776281_37776406_37777600
transcript_195190.known	chr9	+	1443	9	FSM	ENSG00000165275.10	ENST00000488673.6	1443	9	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	15.7950743904548	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGCAGCTGCAGGAG	37751985	True	NA	-5	True	AATAAA	-5	NA	37753816	37778022	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_37753853_37761902_37762118_37762576_37762686_37763628_37763866_37768075_37768229_37769940_37770020_37770671_37770740_37776281_37776406_37777600
transcript_195193.known	chr9	+	7906	7	FSM	ENSG00000122741.16	ENST00000377724.8	7906	7	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	14.9155027478869	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAATGAACCTTCACCATA	37799020	True	NA	8	True	AATAAA	-16	NA	37800796	37867664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_37801406_37819287_37819402_37842088_37842287_37854779_37854983_37857240_37857352_37860047_37860194_37861139
transcript_1952.known	chr1	-	507	3	FSM	ENSG00000069812.11	ENST00000377836.8	507	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTCAGATGTCCAGGCCC	-6419714	False	NA	47	True	NA	NA	NA	6419903	6412999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6413283_6419606_6419703_6419775
transcript_19520.nic	chr1	+	689	4	ISM	ENSG00000117724.14	ENST00000366955.8	10290	20	-40	45877	-40	3504	5prime_fragment	FALSE	canonical	3	177	junction_2	27.8248490062789	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGCATTTTCTTCCTTG	214591351	True	NA	7	True	NA	NA	NA	214603154	214618694	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_214603322_214613713_214613917_214614831_214615029_214618572
transcript_195207.known	chr9	-	1813	4	FSM	ENSG00000107371.14	ENST00000327304.10	1813	4	0	0	0	0	multi-exon	FALSE	canonical	3	536	junction_2	88.2660120821649	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCTTCGTGTGTTTCTAA	-37770704	True	NA	NA	False	GATAAA	-7	NA	37785064	37779713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_37780881_37781985_37782138_37783913_37784064_37784720
transcript_195210.known	chr9	-	773	3	FSM	ENSG00000107371.14	ENST00000490516.5	773	3	0	0	0	0	multi-exon	FALSE	canonical	1	14	junction_2	84.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAATGTATGTATTATTA	-37770353	False	NA	NA	False	TTTAAA	-17	NA	37784713	37780587	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_37780881_37783913_37784064_37784383
transcript_195211.known	chr9	-	768	3	FSM	ENSG00000107371.14	ENST00000396521.3	768	3	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_1	279	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACTCAGAAGATAAGGT	-37770704	True	NA	NA	False	NA	NA	NA	37785064	37780606	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_37780881_37783913_37784064_37784720
transcript_195212.known	chr9	-	2253	3	FSM	ENSG00000107371.14	ENST00000465860.6	2253	3	0	0	0	0	multi-exon	FALSE	canonical	3	536	junction_1	102.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATGATACATTTCACAAC	-37770385	False	NA	NA	False	AATATA	-19	NA	37784745	37780059	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_37782138_37783913_37784064_37784720
transcript_195217.known	chr9	-	1871	4	FSM	ENSG00000122696.14	ENST00000496760.5	1871	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	4.54606056566195	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTGAGTAGCAAACTGAG	-37904090	True	NA	-1	True	AATAAA	-18	NA	37904353	37879399	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_37880749_37881517_37881632_37899828_37899951_37904067
transcript_195219.known	chr9	-	1171	3	FSM	ENSG00000122696.14	ENST00000242275.7	1171	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	2.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGTTTGGCCTCTTTTTT	-37902520	True	NA	-3	True	AATAGA	-15	NA	37904127	37887603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_37888593_37899828_37899951_37904067
transcript_19522.known	chr1	+	689	3	FSM	ENSG00000117724.14	ENST00000464322.5	689	3	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_2	30	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAACAAACAAACAGTG	214591391	True	NA	NA	False	NA	NA	NA	214603194	214615190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_214603322_214613713_214613917_214614831
transcript_195220.known	chr9	-	6035	6	FSM	ENSG00000107338.10	ENST00000377707.4	6035	6	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_5	8.53229160308062	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTGTCTTTTTTTTTTC	-38067651	True	NA	-5	True	AATATA	-19	NA	38069227	37915897	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_37920005_37948634_37948755_37955882_37956055_37974621_37974838_38016010_38016132_38067928
transcript_195222.known	chr9	+	584	3	FSM	ENSG00000137124.8	ENST00000635162.1	584	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	5.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAAGAGTCTTACGCCTT	38385659	True	NA	NA	False	NA	NA	NA	38392711	38396138	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_38392808_38394476_38394566_38395739
transcript_195225.known	chr9	+	3028	2	FSM	ENSG00000137124.8	ENST00000377698.4	3028	2	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_1	0	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTTGTCTCCATATTG	38385649	True	NA	22	True	AATAAA	-22	NA	38392701	38398661	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_38392808_38395739
transcript_195227.known	chr9	-	3566	5	FSM	ENSG00000137142.5	ENST00000377694.2	3566	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	6.79613860953409	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTGTGGTGTCTTTGTT	-38422694	True	NA	-5	True	AATAAA	-15	NA	38424454	38406527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_38409218_38411390_38411550_38413236_38413354_38414093_38414204_38423964
transcript_195239.known	chr9	+	1993	2	FSM	ENSG00000204860.5	ENST00000665533.1	1993	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTAAAATATTATTAACT	38620503	True	NA	-18	True	CATAAA	-22	NA	38620734	38623536	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_38621023_38621831
transcript_19524.nic	chr1	+	364	2	ISM	ENSG00000117724.14	ENST00000464322.5	689	3	-40	1280	-40	17	5prime_fragment	FALSE	canonical	3	237	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGGTACCCCTGAAGCT	214591351	True	NA	0	True	NA	NA	NA	214603154	214613910	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_214603322_214613713
transcript_195243.known	chr9	+	4259	4	FSM	ENSG00000204849.10	ENST00000377647.6	4259	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGTGATGGCTTTTATTT	NA	False	NA	NA	False	AATATA	-30	NA	39355668	39361962	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_39355920_39357131_39357190_39357757_39357819_39358073
transcript_195244.nnic	chr9	-	830	3	NNC	ENSG00000278175.5	novel	902	3	NA	NA	0	-13	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_2	38.5	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATGTCTTATCATCTGT	-39809652	True	NA	NA	False	AATAAA	-15	NA	39810094	39803495	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_39803860_39809485_39809588_39809730
transcript_195245.known	chr9	-	826	3	FSM	ENSG00000278175.5	ENST00000667968.2	902	3	61	15	0	-13	multi-exon	FALSE	canonical	3	105	junction_1	2	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATGTCTTATCATCTGT	-39809945	False	442	NA	False	AATAAA	-15	NA	39810062	39803495	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_39803860_39809485_39809616_39809730
transcript_195247.known	chr9	-	1397	2	FSM	ENSG00000278175.5	ENST00000670314.1	1397	2	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCCTTGGATTTTCAAAT	-39809955	False	NA	NA	False	AATAAA	-21	NA	39810072	39808560	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_39809616_39809730
transcript_195251.known	chr9	-	1888	3	FSM	ENSG00000283886.3	ENST00000622735.2	1888	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTATTGTTTTGTTATTT	NA	False	NA	NA	False	ATTAAA	-22	NA	39874562	39816598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_39817730_39818820_39818925_39873909
transcript_195253.nnic	chr9	+	1545	7	NNC	ENSG00000276291.6	novel	2139	9	NA	NA	1	-1068	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_4	11.0817668065862	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTAACTGCTTACTGTTT	40990853	True	NA	NA	False	AATAAA	-32	NA	40992245	41014136	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_40992776_40993252_40993435_40994632_40994700_41007439_41007610_41008880_41009007_41011616_41011731_41013780
transcript_195255.nnic	chr9	+	1419	6	NNC	ENSG00000276291.6	novel	2139	9	NA	NA	1	-1068	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_4	15.6	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTAACTGCTTACTGTTT	40990853	True	NA	NA	False	AATAAA	-32	NA	40992245	41014136	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_40992776_40993252_40993435_40994632_40994700_41007439_41007610_41011616_41011731_41013780
transcript_195256.known	chr9	+	576	4	ISM	ENSG00000276291.6	ENST00000610803.5	1068	7	1	25475	0	-4360	5prime_fragment	FALSE	canonical	3	28	junction_1	13.4246870437348	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTCAAACCAAAGGCAAAGAA	40990868	True	NA	NA	False	NA	NA	NA	40992260	41007547	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_40992480_40993252_40993435_40994632_40994700_41007439
transcript_195261.nic	chr9	+	712	2	ISM	ENSG00000276291.6	ENST00000690347.1	2139	9	1	42497	1	267	5prime_fragment	FALSE	canonical	3	33	junction_1	0	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATCCTGAATGAATGTG	40990853	True	NA	NA	False	AATAAA	-7	NA	40992245	40993434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_40992776_40993252
transcript_195269.known	chr9	-	721	7	FSM	ENSG00000215126.11	ENST00000617933.1	721	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	588.511894527205	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGCAGAAGAGAATGAAATC	NA	False	NA	NA	False	AGTAAA	-38	NA	41189436	41171919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_41171935_41172711_41172750_41174292_41174353_41182374_41182467_41183563_41183661_41185992_41186080_41189104
transcript_195271.nic	chr9	-	602	3	ISM	ENSG00000215126.11	ENST00000617933.1	721	7	64	11494	-8	-11494	5prime_fragment	FALSE	canonical	3	1131	junction_1	231.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTAAAGTGTTTCTTG	NA	False	NA	NA	False	AATAAA	-15	NA	41189372	41183413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_41183661_41185992_41186080_41189104
transcript_195272.known	chr9	+	4214	4	FSM	ENSG00000185775.10	ENST00000332857.7	4214	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGTGATGGCTTCTATTT	NA	False	NA	NA	False	AATATA	-20	NA	42183658	42189887	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_42183877_42185068_42185127_42185694_42185756_42186010
transcript_195273.known	chr9	+	2318	3	FSM	ENSG00000231527.7	ENST00000668789.1	2318	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTTTTGTTTTCTTCTTC	61856514	False	NA	NA	False	AATAAA	-2	NA	61856533	61974086	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_61856815_61917467_61917608_61972189
transcript_195274.known	chr9	+	559	3	FSM	ENSG00000231527.7	ENST00000657353.1	559	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGTTTTTGTAAGTTT	61856551	False	NA	NA	False	AAGAAA	-18	NA	61856570	61975965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_61856815_61917467_61917608_61975790
transcript_195276.known	chr9	+	1890	3	FSM	ENSG00000227449.8	ENST00000377614.7	1890	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTATTTTGTTATTTA	NA	False	NA	NA	False	ATTAAA	-24	NA	62376160	62435199	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_62376814_62432875_62432980_62434066
transcript_195277.known	chr9	-	2541	2	FSM	ENSG00000204802.3	ENST00000377518.3	2541	2	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCGGGCAAGGCACGAT	NA	False	NA	NA	False	NA	NA	NA	62376783	62374127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_62376383_62376497
transcript_195278.known	chr9	+	1567	3	FSM	ENSG00000170161.7	ENST00000476224.2	1567	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	9.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTGCTCTGTTTACTTA	NA	False	NA	NA	False	NA	NA	NA	62897371	62899777	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_62897735_62897849_62897980_62898703
transcript_195279.known	chr9	+	667	3	FSM	ENSG00000170161.7	ENST00000671425.1	667	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	17.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCCTTGGATTTTCAAAT	NA	False	NA	NA	False	AATAAA	-21	NA	62897370	62898904	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_62897735_62897877_62897980_62898703
transcript_19528.known	chr1	+	4019	18	FSM	ENSG00000136636.13	ENST00000259154.9	4019	18	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_2	36.2925445364104	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTTTTCAGTTATTTAAG	215561106	True	NA	18	True	AATAAA	-15	NA	215567303	215621807	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_215567769_215573785_215573840_215574072_215574119_215575900_215575975_215577669_215577729_215578000_215578082_215578999_215579138_215579908_215580000_215586494_215586686_215595355_215595472_215601866_215601955_215602084_215602202_215604131_215604303_215608016_215608173_215611824_215611922_215618885_215619071_215619152_215619292_215620056
transcript_195280.known	chr9	-	1610	5	FSM	ENSG00000234665.9	ENST00000445604.7	1610	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	18.280795934532	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGCACATGTAGGATCAAT	NA	False	NA	NA	False	NA	NA	NA	62898095	62865596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_62865734_62866966_62867111_62867696_62868234_62869189_62869305_62897418
transcript_195281.known	chr9	-	1713	3	FSM	ENSG00000234665.9	ENST00000654882.1	1713	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	13.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTTAACTGCTTTGTT	NA	False	NA	NA	False	GATAAA	-20	NA	62898095	62867202	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_62868234_62869189_62869305_62897528
transcript_195284.known	chr9	+	2541	2	FSM	ENSG00000170161.7	ENST00000305709.5	2541	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCGGGCCAGGCACGAT	NA	False	NA	NA	False	NA	NA	NA	62897448	62900104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_62897735_62897849
transcript_195285.known	chr9	-	1969	3	FSM	ENSG00000234665.9	ENST00000662817.1	1969	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	19	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTCTGTAAGTTCATCAA	NA	False	NA	NA	False	AATAAA	-16	NA	62898087	62856998	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_62858184_62869189_62869305_62897418
transcript_195300.known	chr9	+	1411	16	FSM	ENSG00000147996.17	ENST00000497250.5	1411	16	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_7	559.151007232294	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATATTTCAAGCATTTAT	65669543	True	NA	0	True	AATAAA	-16	NA	65675895	65733670	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65693385_65693474_65698514_65698562_65700250_65700338_65702969_65703015_65708901_65708959_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
transcript_195305.known	chr9	+	1662	15	FSM	ENSG00000147996.17	ENST00000382405.8	1662	15	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_4	550.338597073267	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGTTGATGTTGACGAC	65669575	True	NA	NA	False	AATAAA	-16	NA	65675927	65734041	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65698514_65698562_65700250_65700338_65702969_65703015_65708901_65708959_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
transcript_195309.known	chr9	+	1242	14	FSM	ENSG00000147996.17	ENST00000430059.6	1242	14	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_9	591.079275612985	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCAAGCATTTATTTAT	65669571	True	NA	4	True	AATAAA	-20	NA	65675923	65733674	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65698514_65698562_65700250_65700338_65702969_65703015_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
transcript_195310.nic	chr9	+	1274	14	NIC	ENSG00000147996.17	novel	1436	16	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	94	junction_7	584.826975879171	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTCAAGCATTTATTT	65669507	True	NA	2	True	AATAAA	-18	NA	65675859	65733672	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65698514_65698562_65702969_65703015_65708901_65708959_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
transcript_195312.known	chr9	+	1143	13	FSM	ENSG00000147996.17	ENST00000377395.8	1143	13	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_8	629.798623018148	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAAGCATTTATTTATTA	65669585	True	NA	6	True	AATAAA	-22	NA	65675937	65733676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65698514_65698562_65702969_65703015_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
transcript_195317.known	chr9	+	1347	3	FSM	ENSG00000147996.17	ENST00000377384.5	1347	3	0	0	0	0	multi-exon	FALSE	canonical	3	1131	junction_2	174.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATCTATTGTTTTCTCCC	65669522	True	NA	NA	False	AATAAA	-42	NA	65675874	65682577	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_65676131_65679165_65679253_65681573
transcript_195328.known	chr9	+	1685	15	FSM	ENSG00000196873.16	ENST00000360171.11	1685	15	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_12	408.430301550325	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACCTGGCTGAAGGAGTG	NA	False	NA	NA	False	AATAAA	-39	NA	68241982	68300035	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_68242186_68245212_68245300_68247612_68247710_68248805_68248898_68256920_68256981_68258531_68258570_68264467_68264515_68266219_68266307_68268933_68268979_68274881_68274939_68285988_68286041_68297579_68297649_68297751_68297818_68298963_68299094_68299480
transcript_195342.known	chr9	+	1736	3	FSM	ENSG00000196873.16	ENST00000478048.5	1736	3	0	0	0	0	multi-exon	FALSE	canonical	3	1155	junction_2	233.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAAGTACTCGTTTGTCA	NA	False	NA	NA	False	ATTAAA	-45	NA	68241955	68249031	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_68242186_68245212_68245300_68247612
transcript_195344.known	chr9	+	3115	16	FSM	ENSG00000107242.20	ENST00000265382.8	3115	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.33599893418581	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGTGGTACATCGATTC	68704739	True	NA	3	True	AATAAA	-16	NA	68705239	69009176	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_68705763_68742500_68742658_68818460_68818546_68822614_68822684_68863836_68863968_68876676_68876795_68888980_68889134_68894338_68894639_68917547_68917760_68919478_68919563_68919680_68919730_68923301_68923387_68934889_68935046_68940645_68940791_68991139_68991258_69008446
transcript_195345.nic	chr9	+	2988	15	NIC	ENSG00000107242.20	novel	3115	16	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	2.80760628671908	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGTGGTACATCGATTC	68704709	True	NA	3	True	AATAAA	-16	NA	68705209	69009176	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_68705763_68818460_68818546_68822614_68822684_68863836_68863968_68876676_68876795_68888980_68889134_68894338_68894639_68917547_68917760_68919478_68919563_68919680_68919730_68923301_68923387_68934889_68935046_68940645_68940791_68991139_68991258_69008446
transcript_19535.known	chr1	-	5195	7	FSM	ENSG00000196482.18	ENST00000408911.8	5195	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.59861050777091	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTCTTTTGTATTGTGTT	-216723263	True	NA	-6	True	ATTAAA	-18	NA	216723429	216503250	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_216507184_216519151_216519422_216564218_216564381_216567987_216568099_216650972_216651090_216677075_216677492_216723243
transcript_195352.known	chr9	+	4322	24	FSM	ENSG00000285130.2	ENST00000643352.1	4322	24	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_5	125.872516297912	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCAGTAAATGATTTTTT	69031593	True	NA	NA	False	NA	NA	NA	69035749	69248929	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_69035948_69046384_69046483_69053139_69053261_69064937_69065036_69099900_69100062_69151650_69151772_69212547_69212602_69216338_69216464_69218256_69218360_69220886_69221497_69225303_69225408_69226021_69226176_69227764_69227874_69227980_69228115_69229183_69229251_69230081_69230233_69234438_69234548_69236027_69236239_69236948_69237137_69237877_69237974_69238709_69238790_69239936_69240148_69246689_69246791_69248011
transcript_195353.nnic	chr9	+	1413	8	ISM	ENSG00000119139.21	ENST00000648087.1	5085	19	8	22829	8	466	5prime_fragment	FALSE	canonical	0	0	junction_1	117.571515361884	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGATAGAAAAGTCAAGAGG	69121289	False	NA	6	True	NA	NA	NA	69121477	69226069	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_69121726_69151650_69151772_69212547_69212602_69216338_69216464_69218256_69218360_69220886_69221497_69225303_69225408_69226021
transcript_195355.known	chr9	+	4806	25	FSM	ENSG00000285130.2	ENST00000642889.1	4806	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	119.621596665857	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTGCAATCCGTAATTT	69031593	True	NA	-3	True	AATAAA	-7	NA	69035749	69255187	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_69035948_69099900_69100062_69151650_69151772_69212547_69212602_69216338_69216464_69218256_69218360_69220886_69221497_69225303_69225408_69226021_69226176_69227764_69227874_69227980_69228115_69229183_69229251_69230081_69230233_69234438_69234548_69236027_69236239_69236948_69237137_69237877_69237974_69238709_69238790_69239936_69240148_69246689_69246791_69248011_69248225_69249374_69249486_69251034_69251365_69252814_69252901_69254208
transcript_195357.known	chr9	+	922	5	FSM	ENSG00000165060.15	ENST00000396366.6	922	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_4	189.432705729502	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCTTATGCCTATACCT	69031605	True	NA	NA	False	NA	NA	NA	69035761	69073022	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_69035948_69046384_69046483_69053139_69053261_69064937_69065044_69072611
transcript_19536.known	chr1	-	5859	10	FSM	ENSG00000092978.11	ENST00000366935.8	5859	10	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	19.8270298106174	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGTAAAGTTGTCAAAAT	-217628827	True	NA	NA	False	ATTAAA	-22	NA	217631090	217426991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_217431366_217449248_217449338_217491679_217491751_217498355_217498396_217514821_217514890_217610320_217610401_217610888_217611072_217614140_217614203_217619782_217620500_217630915
transcript_195360.nic	chr9	+	1059	4	ISM	ENSG00000165060.15	ENST00000396366.6	922	5	-36	7467	-25	-7467	5prime_fragment	FALSE	canonical	3	479	junction_1	13.29995822884	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATCGTCTTATGTTAGCA	69031569	True	NA	NA	False	NA	NA	NA	69035725	69065555	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_69035948_69046384_69046483_69053139_69053261_69064937
transcript_195361.known	chr9	+	2632	4	FSM	ENSG00000165060.15	ENST00000644653.1	2632	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	210.492016211753	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGGCCAGTGCCAGTGAG	69031594	True	NA	-38	True	AATAAA	-36	NA	69035750	69074850	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_69035948_69046384_69046483_69064937_69065036_69072611
transcript_195365.nic	chr9	+	5182	24	NIC	ENSG00000119139.21	novel	5085	19	NA	NA	-259	0	intron_retention	FALSE	canonical	0	0	junction_1	96.3922751024837	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTCTTTGTGGTGGAT	69120911	True	NA	11	True	AATAAA	-21	NA	69121004	69255201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_69121726_69151650_69151772_69212547_69212602_69216338_69216464_69218256_69218360_69220886_69221497_69225303_69225408_69226021_69226176_69227764_69227874_69227980_69228115_69229183_69229251_69230081_69230233_69234438_69234548_69236027_69236239_69236948_69237137_69237877_69237974_69238709_69238790_69239936_69240148_69246689_69246791_69248011_69248225_69249374_69249486_69251034_69251365_69252814_69252901_69254208
transcript_195374.known	chr9	+	4503	23	FSM	ENSG00000119139.21	ENST00000377245.9	4503	23	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	94.0891633566641	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGGTGGATTTGTATG	69174011	True	NA	18	True	AATAAA	-28	NA	69174276	69255208	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_69174433_69212547_69212602_69216338_69216464_69218256_69218360_69220886_69221497_69225303_69225408_69226021_69226176_69227764_69227874_69227980_69228115_69229183_69229251_69230081_69230233_69234438_69234548_69236027_69236239_69236948_69237137_69237877_69237974_69238709_69238790_69239936_69240148_69246689_69246791_69248011_69248225_69249374_69249486_69251034_69251365_69252814_69252901_69254208
transcript_195376.nic	chr9	+	4586	22	NIC	ENSG00000119139.21	novel	5085	19	NA	NA	-104	0	intron_retention	FALSE	canonical	0	0	junction_1	119.664970711648	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTCTTTGTGGTGGAT	69121068	True	NA	11	True	AATAAA	-21	NA	69121159	69255201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_69121726_69151650_69151772_69212547_69212602_69216338_69216464_69218256_69218360_69220886_69221497_69225303_69225408_69226021_69226176_69227764_69227874_69227980_69228115_69229183_69229251_69230081_69230233_69234438_69234548_69236027_69236239_69236948_69237137_69237877_69237974_69238709_69238790_69239936_69240148_69246689_69246791_69248011_69248225_69252814_69252901_69254208
transcript_195379.known	chr9	+	4055	21	FSM	ENSG00000119139.21	ENST00000348208.9	4055	21	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	119.438048795181	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTCTTTGTGGTGGAT	69174011	True	NA	11	True	AATAAA	-21	NA	69174276	69255201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_69174433_69212547_69212602_69216338_69216464_69218256_69218360_69220886_69221497_69225303_69225408_69226021_69226176_69227764_69227874_69227980_69228115_69229183_69229251_69230081_69230233_69234438_69234548_69236027_69236239_69236948_69237137_69237877_69237974_69238709_69238790_69239936_69240148_69246689_69246791_69248011_69248225_69252814_69252901_69254208
transcript_19538.known	chr1	-	3218	6	FSM	ENSG00000092978.11	ENST00000366934.3	3218	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	12.9089116504839	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCCAATTTGTGCTGCT	-217628819	True	NA	-7	True	AATAAA	-27	NA	217631082	217608183	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_217610193_217610320_217610401_217610888_217611072_217614140_217614203_217619782_217620500_217630915
transcript_195387.known	chr9	+	2216	11	FSM	ENSG00000135063.20	ENST00000455972.6	2216	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	26.4764045897475	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGATCACGGACAATAAATC	NA	False	NA	-25	True	NA	NA	NA	69324566	69392558	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_69324631_69336212_69336270_69371498_69371610_69375735_69375865_69377369_69377478_69377610_69377745_69383629_69383760_69383946_69384026_69385794_69385948_69388157_69388451_69391600
transcript_19539.known	chr1	+	5798	11	FSM	ENSG00000162814.11	ENST00000366933.5	5798	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	1.79164728671689	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACCGTCTCTGAGCTTAT	217631251	True	NA	NA	False	ATTAAA	-15	NA	217631343	217871696	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_217631447_217648881_217648972_217651096_217651179_217669032_217669084_217683257_217683362_217741974_217742099_217774333_217774538_217782173_217782323_217801717_217801851_217862773_217862857_217867021
transcript_195393.known	chr9	-	10099	8	FSM	ENSG00000188647.13	ENST00000340434.5	10099	8	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_1	16.8559321599131	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGTTAAGTGTGATTTT	-69752823	True	NA	-4	True	AGTAAA	-18	NA	69760011	69709524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_69718569_69718649_69718685_69723325_69723631_69732138_69732353_69734149_69734255_69741791_69741859_69750780_69750951_69759852
transcript_1954.known	chr1	-	4262	4	FSM	ENSG00000069812.11	ENST00000377834.8	4262	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	2.05480466765633	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGTGTGCCTGTACTTGT	-6419730	True	NA	NA	False	AATAAA	-17	NA	6419919	6415231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6419154_6419240_6419341_6419606_6419703_6419775
transcript_19540.known	chr1	+	7765	5	FSM	ENSG00000067533.6	ENST00000366932.4	7765	5	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_1	19.8179211826064	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTTTTCTTGATTTTT	218279949	True	NA	11	True	AATAAA	-21	NA	218285292	218337983	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_218285456_218302293_218302560_218305027_218305126_218307430_218307633_218330947
transcript_195401.nic	chr9	-	993	5	ISM	ENSG00000188647.13	ENST00000340434.5	10099	8	-71	22407	-71	0	5prime_fragment	FALSE	canonical	3	48	junction_3	7.01338006955277	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTAGTGCATTGGTAAAGC	-69752894	True	NA	22	True	AATAAA	-42	NA	69760082	69731931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_69732353_69734149_69734255_69741791_69741859_69750780_69750951_69759852
transcript_195402.known	chr9	-	1689	2	FSM	ENSG00000188647.13	ENST00000472967.2	1689	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAAGTGTTGTGGGTACC	-69752771	True	NA	NA	False	ATTAAA	-17	NA	69759959	69757122	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_69758705_69759852
transcript_195403.known	chr9	+	844	6	FSM	ENSG00000204711.9	ENST00000377197.8	844	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	55.3642483919	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAGTAGATTCCTTTAAG	69818862	True	NA	4	True	AATAAA	-17	NA	69820816	69906227	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_69821032_69844516_69844626_69856554_69856674_69857908_69857978_69886837_69886896_69905953
transcript_195404.known	chr9	+	748	5	FSM	ENSG00000204711.9	ENST00000527647.5	748	5	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_4	56.5392562738492	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTTAATAAATGCAATGG	69818872	True	NA	-24	True	AATGAA	-28	NA	69820826	69906199	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_69821032_69844516_69844626_69856554_69856674_69857908_69857978_69905953
transcript_195405.known	chr9	+	697	5	FSM	ENSG00000204711.9	ENST00000529446.5	697	5	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	13.6633634219397	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTTAATAAATGCAATGG	69818872	True	NA	-24	True	AATGAA	-28	NA	69820826	69906199	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_69821032_69856554_69856674_69857908_69857978_69886837_69886896_69905953
transcript_195406.known	chr9	+	550	4	FSM	ENSG00000204711.9	ENST00000480564.1	550	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	54.7905101272109	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAAAACAGTAAATCCTC	69819005	False	NA	-19	True	NA	NA	NA	69820959	69858158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_69821032_69844516_69844626_69856554_69856674_69857908
transcript_195408.known	chr9	+	502	3	FSM	ENSG00000204711.9	ENST00000495399.1	502	3	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	17	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTGCAGATCCTGTATT	69818965	True	NA	2	True	AATAAA	-15	NA	69820919	69858179	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_69821032_69856554_69856674_69857908
transcript_195409.known	chr9	+	3351	14	FSM	ENSG00000165072.10	ENST00000377182.5	3351	14	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	8.13204633009385	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCACTAGCAATTAACTCAT	NA	False	NA	10	True	AATAAA	-18	NA	70043847	70226972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_70044232_70044583_70044698_70108210_70108483_70109719_70109805_70112994_70113133_70126158_70126416_70131518_70131613_70140144_70140289_70143553_70143820_70168701_70168796_70170478_70170632_70218336_70218597_70225749_70225835_70225967
transcript_195412.known	chr9	-	1153	2	FSM	ENSG00000268364.3	ENST00000670800.2	1308	2	141	14	129	-11	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCATCACAGGCACTATTT	-70258570	False	NA	NA	False	ATTAAA	-8	NA	70258681	70229003	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_70229390_70257914
transcript_195413.known	chr9	+	5949	25	FSM	ENSG00000198887.9	ENST00000361138.7	5949	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	39.5660488578557	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTGTATGTTATTTTA	70254508	True	NA	28	True	AATAAA	-18	NA	70258977	70354873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_70259264_70264303_70264446_70267922_70267976_70277309_70277473_70278490_70278626_70280758_70280900_70282421_70282584_70286199_70286272_70297965_70298222_70300045_70300201_70305246_70305361_70314741_70314837_70315445_70315579_70318513_70318688_70318793_70318964_70323482_70323607_70324020_70324144_70344143_70344270_70346604_70346650_70347065_70347162_70347612_70347718_70347918_70348039_70350113_70350294_70350375_70350472_70352190
transcript_195418.nic	chr9	+	2845	21	ISM	ENSG00000198887.9	ENST00000361138.7	5949	25	-58	7239	-58	2960	5prime_fragment	FALSE	canonical	0	0	junction_11	41.8674993282379	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAGAAGAAATAGAACAG	70254450	True	NA	NA	False	AATATA	-7	NA	70258919	70347634	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_70259264_70264303_70264446_70267922_70267976_70277309_70277473_70278490_70278626_70280758_70280900_70282421_70282584_70286199_70286272_70297965_70298222_70300045_70300201_70305246_70305361_70314741_70314837_70315445_70315579_70318513_70318688_70318793_70318964_70323482_70323607_70324020_70324144_70344143_70344270_70346604_70346650_70347065_70347162_70347612
transcript_19543.known	chr1	+	492	2	FSM	ENSG00000067533.6	ENST00000491428.1	492	2	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTATGTGAAGGTGGAT	218279998	True	NA	NA	False	NA	NA	NA	218285341	218302671	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_218285456_218302293
transcript_195430.nic	chr9	+	1623	10	ISM	ENSG00000198887.9	ENST00000361138.7	5949	25	-58	54673	-58	13416	5prime_fragment	FALSE	canonical	3	132	junction_3	11.0151410945722	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAAACTTTGTTCATCT	70254450	True	NA	NA	False	TTTAAA	-31	NA	70258919	70300200	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_70259264_70264303_70264446_70267922_70267976_70277309_70277473_70278490_70278626_70280758_70280900_70282421_70282584_70286199_70286272_70297965_70298222_70300045
transcript_195432.nic	chr9	+	1432	9	ISM	ENSG00000198887.9	ENST00000361138.7	5949	25	-58	56688	-58	11401	5prime_fragment	FALSE	canonical	3	132	junction_3	10.8332532048319	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGAGAGGGAAACTCTA	70254450	True	NA	NA	False	NA	NA	NA	70258919	70298185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_70259264_70264303_70264446_70267922_70267976_70277309_70277473_70278490_70278626_70280758_70280900_70282421_70282584_70286199_70286272_70297965
transcript_195435.nic	chr9	+	1198	8	ISM	ENSG00000198887.9	ENST00000361138.7	5949	25	-58	68616	-58	-527	5prime_fragment	FALSE	canonical	3	132	junction_3	10.7152380529138	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAGATAAACATGTAAGG	70254450	True	NA	16	True	NA	NA	NA	70258919	70286257	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_70259264_70264303_70264446_70267922_70267976_70277309_70277473_70278490_70278626_70280758_70280900_70282421_70282584_70286199
transcript_195436.nic	chr9	+	1087	7	ISM	ENSG00000198887.9	ENST00000361138.7	5949	25	-58	72343	-58	-4254	5prime_fragment	FALSE	canonical	3	132	junction_3	10.6209959775699	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGAAGAAATGGAAAACGAG	70254450	True	NA	NA	False	NA	NA	NA	70258919	70282530	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_70259264_70264303_70264446_70267922_70267976_70277309_70277473_70278490_70278626_70280758_70280900_70282421
transcript_19544.known	chr1	+	5868	7	FSM	ENSG00000092969.12	ENST00000366930.9	5868	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	3.18416219575713	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTTGTCTTGCTTTGTC	218345211	True	NA	NA	False	AATAAA	-33	NA	218345335	218444619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_218347048_218405168_218405333_218434081_218434215_218434337_218434449_218435969_218436148_218437342_218437497_218441203
transcript_195441.nic	chr9	+	809	5	ISM	ENSG00000198887.9	ENST00000361138.7	5949	25	-58	76276	-58	-8187	5prime_fragment	FALSE	canonical	3	132	junction_3	12.328828005938	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTAAGGGAGAAAGAAAAAC	70254450	True	NA	NA	False	NA	NA	NA	70258919	70278597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_70259264_70264303_70264446_70267922_70267976_70277309_70277473_70278490
transcript_195443.nic	chr9	+	637	4	ISM	ENSG00000198887.9	ENST00000361138.7	5949	25	-58	77466	-58	-9377	5prime_fragment	FALSE	canonical	3	132	junction_3	13.1993265821489	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGGAAGAGAAAGTTGCA	70254450	True	NA	NA	False	NA	NA	NA	70258919	70277407	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_70259264_70264303_70264446_70267922_70267976_70277309
transcript_195444.known	chr9	-	5201	2	FSM	ENSG00000119138.5	ENST00000377126.4	5201	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGAATTGTTCTAGCCAT	-70414645	False	NA	-11	True	AATAAA	-17	NA	70414657	70384603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_70388006_70412858
transcript_195448.known	chr9	+	333	1	FSM	ENSG00000229814.1	ENST00000437667.1	333	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTAACGAAAAGTCAATAAA	NA	False	NA	NA	False	NA	NA	NA	71589600	71589933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_71589600_71589900
transcript_195449.known	chr9	-	6152	24	FSM	ENSG00000135048.14	ENST00000377044.9	6152	24	0	0	0	0	multi-exon	TRUE	canonical	3	69	junction_22	20.2386517479468	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGTGTGTATGTGAATT	-71765795	True	NA	-11	True	AATAAA	-22	NA	71768513	71683365	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_71685394_71685742_71685847_71690091_71690247_71694508_71694608_71697984_71698205_71700641_71700825_71704594_71704804_71709258_71709475_71712082_71712261_71714933_71715090_71716516_71716553_71717947_71718080_71722426_71722516_71725580_71725710_71729844_71729915_71730047_71730254_71730704_71730915_71732350_71732521_71734805_71734995_71740062_71740233_71745017_71745580_71746200_71746342_71750042_71750386_71768356
transcript_19545.known	chr1	+	1857	5	FSM	ENSG00000143353.12	ENST00000366928.10	1857	5	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_2	35.4118624192515	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGAGTCTCTGCATCGA	219172502	True	NA	6	True	AATAAA	-18	NA	219173877	219212858	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_219173982_219179146_219179247_219193081_219193252_219210531_219210648_219211491
transcript_195451.known	chr9	-	5217	23	FSM	ENSG00000135048.14	ENST00000377066.9	5217	23	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_18	30.1630897533902	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGGCTCCACAGCCTGG	-71768222	False	NA	NA	False	NA	NA	NA	71768386	71683984	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_71685394_71685742_71685847_71690091_71690247_71694508_71694608_71697984_71698205_71700641_71700825_71704594_71704804_71709258_71709475_71712082_71712261_71714933_71715090_71716516_71716553_71717947_71718080_71722426_71722516_71725580_71725710_71729844_71729915_71730047_71730254_71730704_71730915_71732350_71732521_71740062_71740233_71745017_71745580_71746200_71746342_71750042_71750386_71768356
transcript_195455.nnic	chr9	-	3374	5	NNC	ENSG00000107362.14	novel	3065	4	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_4	123.045723208895	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCTTATTTGCCTTTT	-71906904	True	NA	-45	True	AGTAAA	-20	NA	71911235	71865151	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_71867007_71870082_71870263_71874613_71875084_71906383_71906651_71910633
transcript_195462.known	chr9	-	3065	4	FSM	ENSG00000107362.14	ENST00000333421.7	3065	4	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_3	24.8506650928211	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCTTATTTGCCTTTT	-71906862	True	NA	-45	True	AGTAAA	-20	NA	71911193	71865151	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_71867007_71870082_71870263_71874613_71875084_71910633
transcript_195467.known	chr9	+	1185	4	FSM	ENSG00000155621.15	ENST00000334731.7	1185	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	10.1980390271856	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGTCGCTTATGTTTAA	71911554	False	NA	9	True	AATAAA	-16	NA	71911638	71973457	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_71911837_71947005_71947113_71971504_71971619_71972691
transcript_195470.known	chr9	+	1107	4	FSM	ENSG00000155621.15	ENST00000377031.7	1107	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	38.7327022323801	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAAGTGCTGGGCTTACA	71910426	False	NA	NA	False	NA	NA	NA	71911544	71983250	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_71911837_71947005_71947113_71971504_71971619_71982656
transcript_195471.known	chr9	+	902	3	FSM	ENSG00000155621.15	ENST00000479413.1	902	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	40.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATAAAAAGTCAATTTA	71910391	False	NA	-24	True	NA	NA	NA	71911509	71973152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_71911837_71971504_71971619_71972691
transcript_19548.known	chr1	+	1819	5	FSM	ENSG00000143353.12	ENST00000366927.3	1819	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	129.263297188336	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGCATCGACCTATGT	219172499	True	NA	13	True	AATAAA	-25	NA	219173874	219212865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_219173982_219179146_219179247_219193129_219193252_219210531_219210648_219211491
transcript_195484.known	chr9	-	1073	7	FSM	ENSG00000107372.13	ENST00000343431.6	1073	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	256.153220206622	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCTTATAATTGATATT	-72364603	False	NA	29	True	NA	NA	NA	72364626	72355832	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_72356102_72356930_72357057_72359417_72359522_72360109_72360222_72360627_72360788_72363469_72363607_72364461
transcript_195485.known	chr9	-	5841	7	FSM	ENSG00000107372.13	ENST00000376962.10	5841	7	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_5	187.961579998561	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGTAAGACTCCATTTT	-72344574	True	NA	14	True	AATAAA	-32	NA	72365208	72351412	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_72356102_72356930_72357057_72359417_72359522_72360109_72360222_72360627_72360788_72363469_72363607_72364695
transcript_195488.known	chr9	-	5310	6	FSM	ENSG00000107372.13	ENST00000237937.7	5310	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	263.673737789716	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTGTGCCATAAATGTA	-72364569	False	NA	2	True	AATAAA	-20	NA	72364592	72351424	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_72356102_72356930_72357057_72359417_72359522_72360109_72360222_72360627_72360788_72364461
transcript_195489.known	chr9	-	2686	6	FSM	ENSG00000107372.13	ENST00000376960.8	2686	6	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_5	141.609886660501	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCACTTGTTCATTGGGTT	-72344601	True	NA	-4	True	AATAAA	-20	NA	72365235	72354457	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_72356102_72356930_72357057_72359417_72359522_72360109_72360222_72360627_72360788_72364695
transcript_195495.known	chr9	+	588	2	FSM	ENSG00000225434.4	ENST00000451152.1	588	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	72305504	False	NA	NA	False	AATAAA	-17	NA	72305516	72315464	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_72305626_72314985
transcript_195496.known	chr9	-	631	2	FSM	ENSG00000107372.13	ENST00000487330.1	631	2	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCAGTTTTCTTTTTTGGG	-72364953	False	NA	NA	False	AATGAA	-27	NA	72364976	72360437	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_72360788_72364695
transcript_195497.known	chr9	-	2096	13	FSM	ENSG00000165092.13	ENST00000297785.8	2096	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2.8124228384477	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTTACTTTTGAATTT	-72952968	True	NA	-2	True	AATAAA	-16	NA	72953053	72900670	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_72901281_72905957_72906033_72909601_72909760_72911957_72912123_72916919_72917105_72918719_72918823_72924018_72924133_72925483_72925613_72927115_72927178_72928891_72929022_72930878_72931020_72940147_72940253_72952934
transcript_195498.known	chr9	+	1401	13	FSM	ENSG00000135046.14	ENST00000257497.11	1401	13	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_12	4.66071048470319	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTGTCATTGACTCTT	73151549	True	NA	8	True	AATAAA	-18	NA	73151864	73170393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_73151925_73158521_73158602_73158694_73158804_73159328_73159424_73160262_73160377_73160802_73160894_73162781_73162862_73163475_73163533_73165115_73165210_73166096_73166193_73167496_73167556_73169031_73169155_73170050
transcript_195499.known	chr9	+	9581	10	FSM	ENSG00000198963.11	ENST00000376896.8	9581	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	3.89998417217428	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGCCTAATGGTTTTCT	74496587	True	NA	NA	False	ATTAAA	-18	NA	74497334	74693177	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_74497984_74630281_74630368_74634630_74634773_74642413_74642816_74660616_74660739_74662473_74662607_74665487_74665596_74667790_74667902_74671788_74671902_74685462
transcript_19550.known	chr1	+	2169	5	FSM	ENSG00000143353.12	ENST00000483635.5	2169	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	134.46560898609	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGCATCGACCTATGT	219172520	True	NA	13	True	AATAAA	-25	NA	219173895	219212865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_219174305_219179146_219179247_219193081_219193252_219210531_219210648_219211491
transcript_195501.known	chr9	-	2351	2	FSM	ENSG00000135045.7	ENST00000376854.6	2351	2	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGACTGTTTATTGTCAA	-74951376	True	NA	-18	True	AATAAA	-15	NA	74952912	74946582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_74948207_74952185
transcript_195514.known	chr9	-	4259	8	FSM	ENSG00000156017.13	ENST00000376834.8	4259	8	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_7	24.6626214737847	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTTGATTTTCAGTTTT	-75021811	True	NA	NA	False	AATAAA	-26	NA	75028293	74980789	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_74983869_74984906_74985011_74996446_74996561_74998597_74998777_74999729_74999871_75016267_75016432_75017252_75017449_75028011
transcript_195520.known	chr9	-	1012	2	FSM	ENSG00000156017.13	ENST00000376830.3	1012	2	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGCAGTACATAGAAACTG	-75021941	True	NA	NA	False	TATAAA	-11	NA	75028423	75016848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_75017449_75028011
transcript_195525.known	chr9	-	453	2	FSM	ENSG00000106733.21	ENST00000490321.1	453	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGTGTCCGTAAAATTT	-75087011	True	NA	NA	False	AATATA	-38	NA	75088135	75087543	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_75087869_75088007
transcript_195527.known	chr9	+	1348	10	FSM	ENSG00000134996.12	ENST00000346234.7	1348	10	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_1	34.5139084506987	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTGATTTTATTTTTT	75086817	True	NA	88	True	AGTAAA	-18	NA	75088513	75147265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_75088727_75117503_75117551_75127568_75127620_75130577_75130642_75131769_75131824_75133293_75133402_75134345_75134396_75137537_75137617_75140833_75140933_75146682
transcript_19553.known	chr1	+	1703	4	FSM	ENSG00000143353.12	ENST00000460522.5	1703	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	161.099003376461	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGCATCGACCTATGT	219172493	True	NA	13	True	AATAAA	-25	NA	219173868	219212865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_219173982_219179146_219179247_219210531_219210648_219211491
transcript_195531.known	chr9	+	5756	21	FSM	ENSG00000099139.14	ENST00000376752.8	5756	21	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_10	8.84872872225158	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATCTGTTCATACCCAC	75888854	True	NA	12	True	ATTAAA	-21	NA	75890704	76195889	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_75891374_75932378_75932484_75986131_75986246_76023737_76023882_76026960_76027038_76067954_76068044_76071725_76071899_76095889_76096103_76107250_76107352_76134108_76134213_76157044_76157163_76158982_76159172_76169703_76169841_76174985_76175130_76179595_76179699_76181397_76181592_76184672_76184758_76188577_76188676_76189093_76189224_76189630_76189747_76193236
transcript_195537.nnic	chr9	+	3266	20	NIC	ENSG00000099139.14	novel	5756	21	NA	NA	-1	-1519	combination_of_known_splicesites	FALSE	canonical	3	7	junction_9	12.5909434100737	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGCCACCTCTCTCTTTC	75890629	False	NA	24	True	ATTAAA	-32	NA	75890642	76193441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_75891374_75932378_75932484_75986131_75986246_76023737_76023882_76026960_76027038_76067954_76068044_76071725_76071899_76095889_76096103_76107250_76107352_76157044_76157163_76158982_76159172_76169703_76169841_76174985_76175130_76179595_76179699_76181397_76181592_76184672_76184758_76188577_76188676_76189093_76189224_76189630_76189747_76193236
transcript_195547.known	chr9	+	2845	14	FSM	ENSG00000099139.14	ENST00000376767.7	2845	14	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_10	7.43810754069758	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTGTCTATATCTTCA	75888819	True	NA	NA	False	GATAAA	-15	NA	75890669	76175562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_75891374_75932378_75932484_75986131_75986246_76023737_76023882_76026960_76027038_76067954_76068044_76071725_76071899_76095889_76096103_76107250_76107352_76134108_76134213_76157044_76157163_76158982_76159172_76169703_76169841_76174985
transcript_195548.nnic	chr9	+	2522	14	NNC	ENSG00000099139.14	novel	5756	21	NA	NA	-1	219	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	17.2743268136245	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTGAACGTTTTAAAAGT	75890629	False	NA	NA	False	AATAAA	-26	NA	75890642	76175781	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_75891374_75932378_75932484_75986131_75986246_76023737_76023882_76026960_76027038_76067954_76068044_76071725_76071899_76095889_76096103_76107250_76107352_76157044_76157163_76158982_76159172_76169703_76169841_76174985_76175130_76175594
transcript_19555.known	chr1	+	1701	4	FSM	ENSG00000143353.12	ENST00000469590.5	1701	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	164.121905911429	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGCATCGACCTATGT	219174114	False	NA	13	True	AATAAA	-25	NA	219174193	219212865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_219174305_219179146_219179247_219210531_219210648_219211491
transcript_195553.known	chr9	-	962	4	FSM	ENSG00000135002.12	ENST00000483155.5	962	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	80.0791275343748	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGTAATCCCAGCACTTTG	-76393811	False	NA	NA	False	AGTAAA	-30	NA	76393957	76386980	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_76387530_76388553_76388657_76392417_76392570_76393799
transcript_195554.known	chr9	-	2596	4	FSM	ENSG00000135002.12	ENST00000376736.6	2596	4	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_3	7.25718035235908	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTCTTTCCCTGTGTCA	-76394280	False	NA	-15	True	AATAAA	-17	NA	76394426	76385525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_76387530_76388553_76388657_76392417_76392570_76394089
transcript_195558.known	chr9	+	5566	4	FSM	ENSG00000187210.14	ENST00000376730.5	5566	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	34.0978982734518	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTTGTCTGCAGAAATTT	76457071	True	NA	12	True	ATTAAA	-21	NA	76459181	76507416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_76459306_76460059_76460178_76500915_76501062_76502238
transcript_19556.known	chr1	-	4862	32	FSM	ENSG00000136628.18	ENST00000366923.8	4862	32	0	0	0	0	multi-exon	FALSE	canonical	3	596	junction_18	124.085256515411	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTTTGTATTCATTT	-220038987	True	NA	-5	True	AATAAA	-14	NA	220046505	219968599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_219968957_219969057_219969123_219972068_219972148_219973237_219973399_219978545_219978720_219979417_219979616_219980084_219980241_219980755_219980858_219981377_219981458_219982771_219982845_219983188_219983399_219984205_219984258_219987141_219987405_219988589_219988824_219996982_219997343_220001137_220001256_220005247_220005361_220006105_220006314_220007201_220007339_220010945_220011057_220018448_220018509_220018994_220019080_220019987_220020222_220022346_220022519_220024263_220024457_220025131_220025259_220030385_220030481_220032386_220032527_220033501_220033659_220034913_220035014_220040184_220040270_220046342
transcript_195561.known	chr9	+	461	3	FSM	ENSG00000187210.14	ENST00000480311.5	461	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	22.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTTTTAAGGATTCATCAA	76457111	True	NA	NA	False	NA	NA	NA	76459221	76502469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_76459306_76500915_76501062_76502238
transcript_195568.known	chr9	-	1264	6	FSM	ENSG00000106772.19	ENST00000492157.5	1264	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	4.58693797647189	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAAGCAAGTTGTCT	-76906030	False	NA	NA	False	AAAAAG	-7	NA	76906087	76823247	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_76823727_76826579_76826733_76846514_76846679_76850462_76850666_76854103_76854209_76905927
transcript_195569.known	chr9	+	11145	71	FSM	ENSG00000197969.14	ENST00000376636.7	11145	71	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_29	18.6981173340188	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGAATCAAACCACAAGTT	77177386	False	NA	NA	False	NA	NA	NA	77177444	77417483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_77177805_77199944_77199989_77201364_77201408_77205312_77205409_77205977_77206080_77209422_77209533_77210615_77210676_77212968_77213029_77213233_77213315_77214328_77214387_77219953_77220082_77220276_77220384_77221184_77221357_77225925_77225989_77226465_77226599_77227390_77227486_77228121_77228265_77238001_77238192_77238271_77238387_77247258_77247396_77250096_77250230_77252234_77252353_77260085_77260225_77273279_77273365_77275497_77275653_77276064_77276222_77280158_77280239_77281866_77281927_77282120_77282275_77283546_77283651_77293340_77293509_77295541_77295847_77302914_77303063_77307944_77308099_77313991_77314120_77314494_77314665_77315252_77315471_77316173_77316407_77317605_77317699_77318234_77318592_77319571_77319674_77321168_77321328_77321490_77321747_77323066_77323228_77332009_77332114_77337254_77337538_77339515_77339912_77340177_77340283_77340403_77340551_77344152_77344282_77345008_77345143_77351316_77351447_77353408_77353642_77356713_77356868_77357691_77357839_77358356_77358439_77359332_77359403_77360535_77360642_77365459_77365574_77366726_77366873_77368054_77368137_77369298_77369413_77370256_77370333_77370414_77370579_77370889_77370936_77371025_77371150_77381975_77382088_77403235_77403322_77405863_77405988_77407532_77407608_77415955
transcript_19557.known	chr1	-	2968	21	FSM	ENSG00000136628.18	ENST00000609181.5	2968	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	224.955434475364	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAGAAGAAGAAAGAAAAA	-220038933	True	NA	NA	False	NA	NA	NA	220046451	219987295	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_219987405_219988589_219988824_219996982_219997343_220001137_220001256_220005247_220005361_220006105_220006314_220007201_220007339_220010945_220011057_220018125_220018147_220018448_220018509_220018994_220019080_220019987_220020222_220022346_220022519_220024263_220024457_220025131_220025259_220030385_220030481_220032386_220032527_220033501_220033659_220034913_220035014_220040184_220040270_220046342
transcript_195573.nic	chr9	+	1194	8	NIC	ENSG00000197969.14	novel	10086	69	NA	NA	26	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_7	10.6195814514547	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAAAATGCCCTCCAA	77177412	False	NA	NA	False	TTTAAA	-23	NA	77177470	77211617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_77177805_77199944_77199989_77201364_77201408_77205312_77205409_77205977_77206080_77209422_77209533_77210615_77210676_77211212
transcript_195576.known	chr9	-	2497	7	FSM	ENSG00000156049.7	ENST00000341700.7	2497	7	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_4	7.82446306287034	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGGGTTATGTTGTGTT	-77647621	True	NA	-8	True	AATATA	-15	NA	77648322	77423078	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_77424170_77425561_77425716_77428906_77429037_77431320_77431450_77434367_77434523_77529068_77529254_77647669
transcript_195579.known	chr9	-	6882	7	FSM	ENSG00000156052.11	ENST00000286548.9	6882	7	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_1	15.0526852532475	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAAAAAACCTTTTCCCT	-78030302	True	NA	60	True	AATAAA	-30	NA	78031811	77716096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_77721514_77728513_77728668_77794462_77794593_77797519_77797649_77815615_77815771_77922160_77922346_78031099
transcript_195584.known	chr9	+	3159	17	FSM	ENSG00000148019.14	ENST00000647199.1	3159	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	77.3185122965387	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGTAACTAAGCAAAATGA	78231296	True	NA	-18	True	NA	NA	NA	78236079	78271648	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_78236604_78240022_78240196_78240291_78240365_78241695_78241800_78243461_78243637_78246668_78246783_78248290_78248356_78248761_78248874_78250245_78250264_78251904_78252044_78253231_78253278_78254835_78254965_78262906_78262985_78264149_78264317_78265371_78265544_78266441_78266704_78270840
transcript_195589.known	chr9	+	11233	17	FSM	ENSG00000148019.14	ENST00000643273.2	11233	17	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_15	51.5060296834264	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGGCTGCAGGAGTGAGT	78231291	True	NA	NA	False	AATAAA	-20	NA	78236074	78279690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_78236604_78240022_78240196_78240291_78240365_78241695_78241800_78243461_78243637_78246668_78246783_78248290_78248356_78248761_78248874_78251907_78252044_78253231_78253278_78254835_78254965_78262906_78262985_78264149_78264317_78265371_78265544_78265858_78265907_78266441_78266704_78270840
transcript_19559.known	chr1	-	2400	9	FSM	ENSG00000162813.18	ENST00000322067.12	2400	9	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	8.96869555732605	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTGGTTTAAATTAACAG	-220088245	True	NA	NA	False	ATTAAA	-21	NA	220089788	220057481	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_220058993_220059685_220059792_220062756_220062955_220067301_220067394_220069383_220069433_220072849_220072958_220073966_220074072_220079726_220079855_220089685
transcript_195596.known	chr9	+	2788	17	FSM	ENSG00000148019.14	ENST00000642654.1	2788	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	84.3848836803725	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGAAAAAATAACACTTCCA	78231317	True	NA	NA	False	ATTAAA	-24	NA	78236100	78271245	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_78236660_78240022_78240196_78240291_78240365_78241695_78241800_78243461_78243637_78246668_78246783_78248290_78248356_78248761_78248874_78250245_78250264_78251907_78252044_78253231_78253278_78254835_78254965_78262906_78262985_78264149_78264317_78265371_78265544_78266441_78266704_78270840
transcript_195599.known	chr9	+	2678	16	FSM	ENSG00000148019.14	ENST00000643347.1	2678	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	77.8412629793622	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTACCTTTAAATTTT	78231288	True	NA	-38	True	ACTAAA	-14	NA	78236071	78267025	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_78236604_78240022_78240196_78240291_78240365_78241695_78241800_78243461_78243637_78246668_78246783_78248290_78248356_78248761_78248874_78250245_78250264_78251907_78252044_78253231_78253278_78254835_78254965_78262906_78262985_78264149_78264317_78265371_78265544_78266441
transcript_195601.known	chr9	+	2626	16	FSM	ENSG00000148019.14	ENST00000376597.9	2626	16	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_8	59.5456874079802	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGTGTCTTAAAATATAG	78231423	True	NA	12	True	AATAAA	-25	NA	78236206	78267075	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_78236604_78240022_78240196_78240291_78240365_78241695_78241800_78243461_78243637_78246668_78246783_78248290_78248356_78248761_78248874_78251904_78252044_78253231_78253278_78254835_78254965_78262906_78262985_78264149_78264317_78265371_78265544_78265858_78265907_78266441
transcript_195604.known	chr9	+	11198	16	FSM	ENSG00000148019.14	ENST00000424347.6	11198	16	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_14	47.9258686816305	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGGCTGCAGGAGTGAGT	78231278	True	NA	NA	False	AATAAA	-20	NA	78236061	78279690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_78236604_78240022_78240196_78240291_78240365_78241695_78241800_78243461_78243637_78246668_78246783_78248290_78248356_78248761_78248874_78251907_78252044_78253231_78253278_78254835_78254965_78262906_78262985_78264149_78264317_78265371_78265544_78266441_78266704_78270840
transcript_195615.known	chr9	+	2003	16	FSM	ENSG00000148019.14	ENST00000647130.1	2003	16	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	64.0345739945747	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCAGGAGTCTTTTGAAGG	78231588	False	NA	NA	False	NA	NA	NA	78236371	78266564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_78236660_78240022_78240196_78240291_78240365_78241695_78241800_78243461_78243637_78246668_78246783_78248290_78248356_78248761_78248874_78251907_78252044_78253231_78253278_78254835_78254965_78262906_78262985_78264149_78264317_78265371_78265544_78265858_78265907_78266441
transcript_195616.known	chr9	+	2371	15	FSM	ENSG00000148019.14	ENST00000642669.1	2371	15	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_8	56.8202051587788	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGAAAGTGATACTCTT	78231486	False	NA	NA	False	AATAAA	-23	NA	78236269	78266931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_78236604_78240022_78240196_78240291_78240365_78241695_78241800_78243461_78243637_78246668_78246783_78248290_78248356_78248761_78248874_78251904_78252044_78253231_78253278_78254835_78254965_78262906_78262985_78264149_78264317_78265371_78265544_78266441
transcript_195631.nic	chr9	+	3255	8	ISM	ENSG00000148019.14	ENST00000645398.1	2684	16	-19	16240	-16	301	5prime_fragment	FALSE	canonical	3	183	junction_2	19.2258329614408	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATATTTGCATTACTTTC	78231262	True	NA	NA	False	AAGAAA	-8	NA	78236045	78250754	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_78236604_78240022_78240196_78240291_78240365_78241695_78241800_78243461_78243637_78246668_78246783_78248290_78248356_78248761
transcript_195632.known	chr9	+	2975	8	FSM	ENSG00000148019.14	ENST00000536374.1	2975	8	0	0	0	0	multi-exon	TRUE	canonical	2	16	junction_1	71.497109974417	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGCCGGGCACGGTGGCT	78231297	True	NA	NA	False	ATTAAA	-10	NA	78236080	78250453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_78236660_78240022_78240196_78240291_78240365_78241695_78241800_78243461_78243637_78246668_78246783_78248290_78248356_78248761
transcript_195635.known	chr9	+	3093	17	FSM	ENSG00000148019.14	ENST00000643847.1	3093	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	84.1171058703282	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATTAACGTGTGGTTTTG	78231321	True	NA	10	True	AATGAA	-8	NA	78236104	78271676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_78236604_78240022_78240196_78240291_78240365_78241695_78241800_78243461_78243637_78248290_78248356_78248761_78248874_78250245_78250264_78251907_78252044_78253231_78253278_78254835_78254965_78262906_78262985_78264149_78264317_78265371_78265544_78265858_78265907_78266441_78266704_78270840
transcript_195643.known	chr9	+	2206	9	FSM	ENSG00000135069.14	ENST00000376588.4	2206	9	0	0	0	0	multi-exon	FALSE	canonical	3	1090	junction_7	128.864209053561	1380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTGTCAATGAATTTCT	78266249	True	NA	72	True	ATTAAA	-17	NA	78297124	78330093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_78297271_78300601_78300663_78301953_78302024_78304734_78304941_78306313_78306487_78308413_78308584_78317675_78317805_78328050_78328189_78328980
transcript_195650.known	chr9	+	1411	8	FSM	ENSG00000135069.14	ENST00000347159.6	1411	8	0	0	0	0	multi-exon	TRUE	canonical	3	174	junction_7	449.466259431503	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGGCCCTCTAGGTGCTG	78266267	True	NA	NA	False	NA	NA	NA	78297142	78329454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_78297271_78300601_78300663_78301953_78302024_78304734_78304941_78306313_78306487_78308413_78308584_78317675_78317805_78328980
transcript_195664.known	chr9	+	2793	21	FSM	ENSG00000106829.20	ENST00000376537.8	2793	21	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	66.1344085934092	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCAGCTGTCTACTTGGA	79572586	False	NA	NA	False	ATTAAA	-17	NA	79572614	79725343	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_79572836_79573688_79573787_79574872_79574937_79576132_79576178_79612655_79612719_79627373_79627449_79652592_79652795_79654058_79654076_79704782_79704903_79705888_79705943_79706746_79706900_79707122_79707219_79708117_79708251_79708592_79708787_79709622_79709700_79718721_79718972_79720045_79720294_79721740_79721889_79722450_79722602_79722958_79723036_79725036
transcript_195666.known	chr9	+	4886	20	FSM	ENSG00000106829.20	ENST00000376552.8	4886	20	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_6	43.5407282191102	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGTGGGTTTTTTTCAC	79567249	True	NA	NA	False	AGTAAA	-22	NA	79571964	79726882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_79572836_79573688_79573787_79574872_79574937_79576132_79576178_79612655_79612719_79627373_79627449_79652592_79652795_79654058_79654076_79704782_79704903_79705888_79705943_79706746_79706900_79708117_79708251_79708592_79708787_79709622_79709700_79718721_79718972_79720045_79720294_79721740_79721889_79722450_79722602_79722958_79723036_79725036
transcript_195678.known	chr9	+	2382	19	FSM	ENSG00000106829.20	ENST00000265284.10	2382	19	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	52.0792368759398	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGGATTTCAGATACTCA	79572662	False	NA	NA	False	NA	NA	NA	79572744	79725233	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_79572836_79573688_79573787_79574872_79574937_79576132_79576178_79612655_79612719_79652592_79652795_79654058_79654076_79704782_79704903_79705888_79705943_79706746_79706900_79708117_79708251_79708592_79708787_79709622_79709700_79718721_79718972_79720045_79720294_79721740_79721889_79722450_79722602_79722958_79723036_79725036
transcript_195685.known	chr9	+	4871	18	FSM	ENSG00000106829.20	ENST00000376544.7	4871	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	59.4773662280502	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGTGGGTTTTTTTCAC	NA	False	NA	NA	False	AGTAAA	-22	NA	79571772	79726882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_79572836_79573688_79573787_79574872_79574937_79576132_79576178_79612655_79612719_79627373_79627449_79652592_79652795_79654058_79654076_79704782_79704903_79708117_79708251_79708592_79708787_79709622_79709700_79718721_79718972_79720045_79720294_79721740_79721889_79722450_79722602_79722958_79723036_79725036
transcript_195700.nic	chr9	-	4264	20	NIC	ENSG00000196781.16	novel	4135	20	NA	NA	-99	0	combination_of_known_junctions	FALSE	canonical	3	157	junction_14	156.04530913858	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTTCCTTTTCTTTCT	-81689634	False	NA	79	True	AGTAAA	-18	NA	81689646	81583682	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_81584306_81584447_81584525_81585504_81585656_81587680_81587829_81590804_81591053_81593024_81593275_81610219_81610297_81611768_81611960_81613376_81613522_81615981_81616135_81616645_81616700_81620440_81620558_81633347_81633365_81634096_81634302_81652183_81652289_81653973_81654037_81685675_81685721_81685832_81685897_81687333_81687435_81688216
transcript_195701.known	chr9	-	4135	20	FSM	ENSG00000196781.16	ENST00000376499.8	4135	20	0	0	0	0	multi-exon	TRUE	canonical	3	370	junction_8	122.393489226291	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTTCCTTTTCTTTCT	-81676730	True	NA	79	True	AGTAAA	-18	NA	81689547	81583682	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_81584306_81584447_81584525_81585504_81585656_81587680_81587829_81590804_81591053_81593024_81593275_81610219_81610297_81611768_81611960_81613376_81613522_81615981_81616135_81616645_81616700_81620440_81620558_81633347_81633365_81634096_81634302_81652213_81652289_81653973_81654037_81685675_81685721_81685832_81685897_81687333_81687435_81688216
transcript_19571.known	chr1	-	2357	8	FSM	ENSG00000162813.18	ENST00000414869.6	2357	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	20.6328448284352	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTGGTTTAAATTAACAG	-220088310	True	NA	NA	False	ATTAAA	-21	NA	220089853	220057481	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_220058993_220059685_220059792_220062756_220062955_220067301_220067394_220069383_220069433_220073966_220074072_220079726_220079855_220089685
transcript_195725.nnic	chr9	-	3994	18	NIC	ENSG00000196781.16	novel	4135	20	NA	NA	-81	0	combination_of_known_splicesites	FALSE	canonical	3	39	junction_12	184.630651595694	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTTCCTTTTCTTTCT	-81689616	False	NA	79	True	AGTAAA	-18	NA	81689628	81583682	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_81584306_81584447_81584525_81585504_81585656_81587680_81587829_81590804_81591053_81593024_81593275_81610219_81610297_81611768_81611960_81613376_81613522_81615981_81616135_81616645_81616700_81620440_81620558_81652213_81652289_81653973_81654037_81685675_81685721_81685832_81685897_81687333_81687435_81688216
transcript_195745.nic	chr9	-	2850	7	ISM	ENSG00000196781.16	ENST00000376499.8	4135	20	-338	49786	-338	0	5prime_fragment	FALSE	canonical	3	427	junction_1	150.909925304983	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGGCTTGTGTTCTAAT	NA	False	NA	-2	True	AATAAA	-18	NA	81689885	81633468	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_81634302_81652213_81652289_81653973_81654037_81685675_81685721_81685832_81685897_81687333_81687435_81688216
transcript_195746.nic	chr9	-	2621	7	ISM	ENSG00000196781.16	ENST00000418319.5	936	9	-1180	13017	-81	-2	5prime_fragment	FALSE	canonical	3	157	junction_1	239.695234736854	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGGGCTTGTGTTCTA	-81689616	False	NA	-4	True	AATAAA	-16	NA	81689628	81633470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_81634302_81652183_81652289_81653973_81654037_81685675_81685721_81685832_81685897_81687333_81687435_81688216
transcript_195758.known	chr9	-	5585	17	FSM	ENSG00000165105.10	ENST00000376447.4	5585	17	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_11	4.64858849544676	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGAGTGTTTCCTTCAG	-83062872	True	NA	-5	True	AATAAA	-17	NA	83063142	82979589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_82982783_82990390_82990468_82992905_82993026_82997011_82997127_82998364_82998447_83000168_83000317_83000432_83000571_83000895_83001131_83004497_83004587_83005415_83005501_83007436_83007506_83009640_83009757_83012433_83012512_83015804_83015901_83022335_83022427_83025774_83025922_83062436
transcript_19576.known	chr1	+	3530	23	FSM	ENSG00000067704.10	ENST00000366922.3	3530	23	0	0	0	0	multi-exon	FALSE	canonical	3	536	junction_8	48.5148865285289	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTGATTTTGGTGCAGA	220085146	True	NA	14	True	AATAAA	-18	NA	220094131	220148041	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_220094484_220096103_220096227_220100489_220100650_220102128_220102278_220102362_220102413_220102494_220102605_220102686_220102778_220103446_220103563_220105890_220106061_220107060_220107152_220110785_220110938_220114313_220114475_220125236_220125340_220126749_220126844_220134401_220134511_220136808_220136912_220137917_220138044_220139007_220139140_220140182_220140290_220141802_220141949_220142943_220143135_220145508_220145654_220147492
transcript_195763.known	chr9	-	1765	2	FSM	ENSG00000165105.10	ENST00000340717.4	1765	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAGAACAGAAAAAC	-83062907	True	NA	NA	False	GATAAA	-16	NA	83063177	83054659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_83055684_83062436
transcript_195764.known	chr9	+	936	5	FSM	ENSG00000148057.16	ENST00000376419.5	936	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	3.96074487943871	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCATTCCCTGGAAATT	83622972	True	NA	2	True	AATAAA	-16	NA	83623142	83644123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_83623222_83628180_83628212_83628872_83628960_83641547_83641592_83643428
transcript_195767.known	chr9	-	3868	11	FSM	ENSG00000135018.14	ENST00000376395.9	3868	11	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_4	294.90996931267	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGATTTGTCTTGCCTCTT	-83687490	True	NA	-6	True	AATAAA	-16	NA	83707958	83659967	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_83661940_83663874_83664044_83665029_83665146_83666349_83666434_83669184_83669328_83677726_83677962_83678440_83678600_83679774_83680038_83682950_83683067_83686003_83686156_83707499
transcript_19577.nic	chr1	+	442	2	ISM	ENSG00000067704.10	ENST00000366922.3	3530	23	-45	51893	-45	-38698	5prime_fragment	FALSE	canonical	3	578	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGACAGAATTTTGCCT	NA	False	NA	NA	False	AAGAAA	-2	NA	220094086	220096148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_220094484_220096103
transcript_195770.known	chr9	-	2299	10	FSM	ENSG00000135018.14	ENST00000257468.11	2299	10	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_3	330.727406309109	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATCATTTGCACTCTAT	-83687466	True	NA	-22	True	AATAAA	-15	NA	83707934	83661428	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_83661940_83663874_83664044_83665029_83665146_83669184_83669328_83677726_83677962_83678440_83678600_83679774_83680038_83682950_83683067_83686003_83686156_83707499
transcript_19578.known	chr1	-	7256	35	FSM	ENSG00000118873.17	ENST00000358951.7	7256	35	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	32.4873811009113	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTTTCCTAAACATTCA	-220264973	True	NA	-38	True	AATAAA	-14	NA	220272453	220148292	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_220151407_220151605_220151765_220153184_220153407_220153967_220154058_220157269_220157489_220157801_220157877_220159385_220159422_220162197_220162269_220164732_220164800_220167292_220167400_220167501_220167676_220170891_220171121_220171888_220172050_220172636_220172743_220182256_220182355_220182717_220182932_220184035_220184164_220185650_220185742_220189702_220189768_220190063_220190147_220190376_220190521_220191067_220191285_220193239_220193380_220195077_220195168_220195297_220195378_220196249_220196399_220202275_220202375_220205906_220206007_220210387_220210490_220210800_220210877_220210954_220211003_220212886_220212969_220213855_220213980_220232798_220232864_220272222
transcript_195791.known	chr9	-	1511	12	FSM	ENSG00000165113.13	ENST00000376365.7	1511	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	10.0995049383621	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATATGTTTGATTTGTTA	-83816890	False	NA	-4	True	AATAAA	-18	NA	83817632	83739424	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_83739745_83741951_83742030_83742529_83742601_83748308_83748373_83753257_83753360_83780381_83780405_83784714_83784839_83788600_83788679_83799184_83799329_83806301_83806561_83816995_83817128_83817516
transcript_195808.nnic	chr9	-	553	3	NNC	ENSG00000165115.15	novel	7257	18	NA	NA	-71	-20838	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_2	7.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGTCTGTGTTACTTAA	-83920778	True	NA	NA	False	AATAAA	-15	NA	83921536	83919533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_83919814_83920105_83920213_83921370
transcript_195809.known	chr9	-	2468	4	FSM	ENSG00000165118.15	ENST00000376344.8	2468	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	5.43650214343336	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAATGGATTATTTCAT	-83955483	True	NA	-5	True	AATAAA	-23	NA	83956742	83938310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_83939744_83944793_83944990_83955380_83955641_83956163
transcript_195810.known	chr9	-	620	3	FSM	ENSG00000165118.15	ENST00000376340.2	620	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	23.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTTGGCGTGGTGGCTC	-83956302	False	NA	NA	False	AATAAA	-18	NA	83956327	83953647	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_83953844_83955380_83955641_83956163
transcript_195811.known	chr9	-	2067	5	FSM	ENSG00000165118.15	ENST00000314700.5	2067	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	22.8623598956888	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTGGAATGGATTATTT	-83956961	True	NA	-8	True	AATAAA	-20	NA	83956986	83938313	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_83939744_83944793_83944990_83955380_83955641_83956163_83956255_83956896
transcript_195820.known	chr9	-	2928	17	FSM	ENSG00000165119.21	ENST00000376281.8	2928	17	0	0	0	0	multi-exon	TRUE	canonical	3	5662	junction_16	1090.54421620584	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTGTGAAGTGTTT	-83963568	True	NA	-4	True	AATATA	-14	NA	83980604	83968082	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_83969441_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83973901_83973974_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83980502
transcript_195826.nic	chr9	-	2796	17	NIC	ENSG00000165119.21	novel	2652	16	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	5662	junction_16	1138.91447769356	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACACCCATGATGCTAG	-83980631	False	NA	-25	True	AATAAA	-1	NA	83980646	83968196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_83969381_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83973901_83973974_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83980502
transcript_195829.nic	chr9	-	2721	17	NIC	ENSG00000165119.21	novel	2928	17	NA	NA	-23	-68	combination_of_known_junctions	FALSE	canonical	3	5662	junction_16	1138.91447769356	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGTGGATGTTTTGTG	-83980624	False	NA	-41	True	AAAAAG	-10	NA	83980639	83968264	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_83969381_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83973901_83973974_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83980502
transcript_195847.nic	chr9	-	2148	17	NIC	ENSG00000165119.21	novel	2038	17	NA	NA	-94	0	combination_of_known_junctions	FALSE	canonical	3	5662	junction_16	1138.91447769356	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTGGTCATTTTTTT	-83980695	False	NA	-18	True	AATAAA	-14	NA	83980710	83968908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_83969381_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83973901_83973974_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83980502
transcript_195904.nic	chr9	-	2064	16	NIC	ENSG00000165119.21	novel	2928	17	NA	NA	-24	-2	combination_of_known_junctions	FALSE	canonical	3	1279	junction_9	2104.79633852462	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTGGTGGTCATTTTT	-83980625	False	NA	-20	True	AATAAA	-12	NA	83980640	83968910	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_83969441_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83980502
transcript_195933.known	chr9	-	2889	17	FSM	ENSG00000165119.21	ENST00000376263.8	2889	17	0	0	0	0	multi-exon	FALSE	canonical	3	3164	junction_16	1552.19392614937	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTGTGAAGTGTTT	-83943539	True	NA	-4	True	AATATA	-14	NA	83980215	83968082	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_83969441_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83973901_83973974_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83980152
transcript_195934.known	chr9	-	2652	16	FSM	ENSG00000165119.21	ENST00000351839.7	2652	16	0	0	0	0	multi-exon	FALSE	canonical	3	6067	junction_1	927.935907748422	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACACCCATGATGCTAG	-83978437	False	4887	-25	True	AATAAA	-1	NA	83978452	83968196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_83969381_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83973901_83973974_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372
transcript_195935.known	chr9	-	2038	17	FSM	ENSG00000165119.21	ENST00000360384.9	2038	17	0	0	0	0	multi-exon	FALSE	canonical	3	3164	junction_16	1584.04012240063	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTGGTCATTTTTTT	-83943574	True	NA	-18	True	AATAAA	-14	NA	83980250	83968908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_83969381_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83973901_83973974_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83980152
transcript_19594.nic	chr1	-	2351	20	ISM	ENSG00000118873.17	ENST00000687394.1	4052	33	-60	29639	-2	-1194	5prime_fragment	FALSE	canonical	2	91	junction_8	18.3642733969009	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTGAAGAGGAATATGTG	NA	False	NA	NA	False	CATAAA	-6	NA	220272503	220182744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_220182932_220184035_220184164_220185650_220185742_220189702_220189768_220190063_220190147_220190376_220190521_220191067_220191285_220193239_220193380_220195077_220195168_220195297_220195378_220196249_220196399_220202275_220202375_220205906_220206007_220210387_220210490_220210800_220210877_220210954_220211003_220212886_220212969_220213855_220213980_220232798_220232864_220272222
transcript_195940.known	chr9	+	3300	3	FSM	ENSG00000178966.17	ENST00000445877.6	3300	3	0	0	0	0	multi-exon	TRUE	canonical	3	171	junction_1	46.5	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGGTGTTTTATTTTA	83977581	True	NA	110	True	ATTAAA	-21	NA	83980804	84004074	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_83980892_83999708_83999798_84000950
transcript_195941.known	chr9	+	3420	3	FSM	ENSG00000178966.17	ENST00000325875.7	3420	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	111.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGGTGTTTTATTTTA	83977574	True	NA	110	True	ATTAAA	-21	NA	83980797	84004074	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_83981005_83999708_83999798_84000950
transcript_195946.known	chr9	-	4208	26	FSM	ENSG00000135049.16	ENST00000376083.7	4208	26	0	0	0	0	multi-exon	TRUE	canonical	3	51	junction_16	41.8721864726455	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTTGTCATCTTCTTT	-85737913	False	NA	-3	True	AATAAA	-20	NA	85741818	85546538	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_85547287_85575314_85575476_85578919_85579097_85585462_85585595_85586830_85586961_85588297_85588479_85589527_85589682_85592559_85592705_85596361_85596450_85618982_85619132_85619214_85619302_85621201_85621286_85632661_85633375_85642826_85642944_85646320_85646419_85655142_85655201_85657434_85657644_85660935_85660974_85669484_85669579_85672549_85672682_85677435_85677583_85678334_85678399_85681267_85681336_85692688_85692814_85712501_85712567_85741774
transcript_195947.known	chr9	-	4464	26	FSM	ENSG00000135049.16	ENST00000357081.8	4464	26	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_16	29.9242777690624	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTTGTCATCTTCTTT	-85738049	True	NA	-3	True	AATAAA	-20	NA	85741954	85546538	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_85547287_85575314_85575476_85578919_85579097_85585462_85585595_85586830_85586961_85588297_85588479_85589527_85589682_85592559_85592705_85596361_85596450_85618982_85619132_85619214_85619302_85621201_85621286_85632661_85633375_85642826_85642944_85646320_85646419_85655142_85655321_85657434_85657644_85660935_85660974_85669484_85669579_85672549_85672682_85677435_85677583_85678334_85678399_85681267_85681336_85692688_85692814_85712501_85712567_85741774
transcript_195952.known	chr9	-	4473	25	FSM	ENSG00000135049.16	ENST00000337006.8	4473	25	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_24	51.1863256207706	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATTTTGTCATCTTCTT	NA	False	NA	-4	True	AATAAA	-19	NA	85742029	85546539	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_85547287_85575314_85575476_85578919_85579097_85585462_85585595_85586830_85586961_85588297_85588479_85589527_85589682_85592559_85592705_85596361_85596450_85618982_85619132_85619214_85619302_85621201_85621286_85632661_85633375_85642826_85642944_85646320_85646419_85655142_85655321_85657434_85657644_85660935_85660974_85669484_85669579_85672549_85672682_85677435_85677583_85678334_85678399_85681267_85681336_85692688_85692814_85741774
transcript_195957.nic	chr9	-	3976	25	ISM	ENSG00000135049.16	ENST00000357081.8	4464	26	-50	28566	25	-21232	5prime_fragment	FALSE	canonical	3	140	junction_15	28.9121934580473	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTAGTGGTTGTACTG	-85738099	True	NA	NA	False	AATAAA	-14	NA	85742004	85575104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_85575476_85578919_85579097_85585462_85585595_85586830_85586961_85588297_85588479_85589527_85589682_85592559_85592705_85596361_85596450_85618982_85619132_85619214_85619302_85621201_85621286_85632661_85633375_85642826_85642944_85646320_85646419_85655142_85655321_85657434_85657644_85660935_85660974_85669484_85669579_85672549_85672682_85677435_85677583_85678334_85678399_85681267_85681336_85692688_85692814_85712501_85712567_85741774
transcript_19597.known	chr1	-	1906	2	FSM	ENSG00000118873.17	ENST00000462353.1	1906	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGAAGTCTGGTCTTAC	-220264881	True	NA	-8	True	AGTAAA	-15	NA	220272361	220265984	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_220267752_220272222
transcript_195974.nic	chr9	-	420	3	ISM	ENSG00000135049.16	ENST00000376081.8	914	9	-116	37473	25	-35235	5prime_fragment	FALSE	canonical	3	227	junction_2	14.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACATTGATCTCTTCTT	-85738099	True	NA	0	True	NA	NA	NA	85742004	85692688	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_85692814_85712501_85712567_85741774
transcript_195979.nic	chr9	+	3366	23	NIC	ENSG00000135040.16	novel	5813	23	NA	NA	-116	-3164	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	48.5842754209818	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCACTGCTGGAGATGAAAA	NA	False	NA	74	True	AATAAA	-20	NA	85941029	86022298	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_85941875_85942154_85942284_85956359_85956394_85958471_85958587_85959792_85959868_85962012_85962181_85974966_85975034_85975113_85975158_85976684_85976736_85977362_85977447_85978266_85978382_85996398_85996578_86003584_86003645_86007357_86007465_86009864_86009932_86013045_86013145_86013718_86013898_86016538_86016676_86017497_86017566_86018254_86018396_86018698_86018822_86020888_86020970_86021900
transcript_195982.known	chr9	+	5813	23	FSM	ENSG00000135040.16	ENST00000361671.10	5813	23	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	32.4030658686173	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGATCATAAAATGCAAG	85937574	True	NA	NA	False	NA	NA	NA	85941145	86025462	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_85941274_85942154_85942284_85956359_85956394_85958471_85958587_85959792_85959868_85962012_85962181_85974966_85975034_85975113_85975158_85976684_85976736_85977362_85977447_85978266_85978382_85996398_85996578_86003584_86003645_86007357_86007465_86009864_86009932_86013045_86013145_86013718_86013898_86016538_86016676_86017497_86017566_86018254_86018396_86018698_86018822_86020888_86020970_86021900
transcript_195996.nic	chr9	+	2554	18	NIC	ENSG00000135040.16	novel	5813	23	NA	NA	-116	-8788	combination_of_known_junctions	TRUE	canonical	3	64	junction_1	49.814812766227	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCTGTGGATTATTTTTA	NA	False	NA	NA	False	AGTAAA	-22	NA	85941029	86016674	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_85941875_85942154_85942284_85956359_85956394_85958471_85958587_85959792_85959868_85962012_85962181_85974966_85975034_85975113_85975158_85976684_85976736_85977362_85977447_85978266_85978382_85996398_85996578_86003584_86003645_86007357_86007465_86009864_86009932_86013045_86013145_86013718_86013898_86016538
transcript_195998.nic	chr9	+	1915	18	ISM	ENSG00000135040.16	ENST00000361671.10	5813	23	-78	8788	-78	-8788	5prime_fragment	FALSE	canonical	3	177	junction_1	30.0570392010978	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCTGTGGATTATTTTTA	NA	False	NA	NA	False	AGTAAA	-22	NA	85941067	86016674	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_85941274_85942154_85942284_85956359_85956394_85958471_85958587_85959792_85959868_85962012_85962181_85974966_85975034_85975113_85975158_85976684_85976736_85977362_85977447_85978266_85978382_85996398_85996578_86003584_86003645_86007357_86007465_86009864_86009932_86013045_86013145_86013718_86013898_86016538
transcript_196.known	SIRV5	+	546	2	FSM	SIRV5A	SIRV511	546	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTACGGCCAGTTTAGC	NA	False	NA	NA	False	AATGAA	-17	NA	1008	2398	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV5_+_1144_1987
transcript_1960.known	chr1	-	1770	9	FSM	ENSG00000215788.11	ENST00000647810.1	1770	9	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	34.6013005535919	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGGGGACGGGGCGCAG	-6465443	False	NA	NA	False	NA	NA	NA	6465470	6460785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6461763_6461993_6462175_6462628_6462664_6462862_6462971_6463071_6463128_6464374_6464454_6464551_6464720_6465087_6465223_6465439
transcript_196000.nnic	chr9	+	1931	18	NNC	ENSG00000135040.16	novel	5813	23	NA	NA	2	-8788	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	60.044101439251	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCTGTGGATTATTTTTA	85937612	True	NA	NA	False	AGTAAA	-22	NA	85941183	86016674	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_85941406_85942154_85942284_85956359_85956394_85958471_85958587_85959792_85959868_85962012_85962181_85974966_85975034_85975113_85975158_85976684_85976736_85977362_85977447_85978266_85978382_85996398_85996578_86003584_86003645_86007357_86007465_86009864_86009932_86013045_86013145_86013718_86013898_86016538
transcript_196007.known	chr9	-	3046	10	FSM	ENSG00000135052.16	ENST00000388712.7	3046	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	363.547643217349	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACTTGTCACAGCTCTG	-86091481	True	NA	NA	False	AATAAA	-18	NA	86099558	86026145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_86027894_86033281_86033396_86035367_86035626_86036347_86036508_86040738_86040869_86046469_86046573_86052536_86052592_86077411_86077592_86079191_86079342_86099410
transcript_196008.known	chr9	-	3022	10	FSM	ENSG00000135052.16	ENST00000388711.7	3022	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	472.028430824005	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAACTTGTCACAGCTCT	-86099797	True	NA	NA	False	AATAAA	-17	NA	86100149	86026146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_86027894_86033281_86033396_86035367_86035626_86036347_86036508_86040738_86040869_86046469_86046573_86052536_86052592_86077411_86077592_86079191_86079342_86100024
transcript_196020.known	chr9	-	813	4	FSM	ENSG00000135070.15	ENST00000311534.6	813	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	192.236544103583	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGAGACAGGACATCGTG	-86278716	False	3392	81	True	NA	NA	NA	86282108	86265678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_86266192_86272006_86272113_86274188_86274243_86281968
transcript_196021.known	chr9	-	1967	4	FSM	ENSG00000135070.15	ENST00000375991.9	1967	4	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_1	32.2214559295855	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTTTTATTATTGAGGG	-86279146	True	NA	NA	False	ATTAAA	-30	NA	86282538	86264545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_86266192_86272006_86272113_86274188_86274243_86282377
transcript_19603.known	chr1	+	5321	18	FSM	ENSG00000116141.17	ENST00000611084.4	5321	18	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_15	16.8436736658175	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTGGGGCACAGCATT	220526534	True	NA	NA	False	ATTAAA	-14	NA	220528182	220664456	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_220528874_220579353_220579558_220581064_220581119_220598330_220598380_220599797_220599864_220604066_220604138_220615938_220615996_220618309_220618547_220618635_220618756_220631034_220631135_220632200_220632314_220635375_220635530_220635832_220636027_220650619_220650721_220651985_220652151_220653097_220653353_220657789_220657835_220661811
transcript_196031.nic	chr9	-	2466	13	ISM	ENSG00000083223.18	ENST00000375963.8	5603	27	-46	35768	-2	127	5prime_fragment	FALSE	canonical	3	48	junction_1	11.6341809624342	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGAGAAAGAGAAAGTTGGAA	-86353146	True	NA	NA	False	GATAAA	-30	NA	86354456	86323500	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_86323961_86325333_86325515_86328339_86328493_86337418_86337539_86338822_86338950_86340035_86340106_86341001_86341054_86343074_86343164_86344976_86345155_86345668_86345786_86346298_86346481_86352679_86353231_86354270
transcript_196034.known	chr9	-	4939	20	FSM	ENSG00000083223.18	ENST00000375960.6	4939	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	23.3431584643427	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATCTACATTATTTTCT	-86353144	True	NA	-24	True	AATAAA	-21	NA	86354454	86287732	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_86288745_86301275_86301602_86303085_86303202_86304855_86304948_86305191_86305240_86308428_86308607_86309211_86309290_86309462_86309577_86309927_86310018_86310705_86310810_86317218_86317277_86322872_86323961_86325333_86325515_86328339_86328493_86343074_86343164_86344976_86345155_86345668_86345786_86346298_86346481_86352679_86353231_86354270
transcript_196035.known	chr9	-	3145	1	FSM	ENSG00000180447.7	ENST00000298743.9	3145	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTGTAGTTACTTTCCA	-86947324	False	182	NA	False	ATTAAA	-35	NA	86947506	86944361	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_86944400_86947500
transcript_196036.known	chr9	-	2245	2	FSM	ENSG00000269994.3	ENST00000669870.1	2245	2	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAATTACTTTTTATCCA	NA	False	NA	NA	False	AATAGA	-5	NA	87042419	87008514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_87010211_87041870
transcript_196040.known	chr9	+	5759	26	FSM	ENSG00000196730.13	ENST00000472284.5	5759	26	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	93.7635664850692	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGTTTTTTTGATCTTTA	87497649	False	NA	15	True	AATAAA	-15	NA	87497680	87708630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_87497773_87498969_87499140_87604953_87605176_87637942_87638082_87639353_87639484_87639649_87639699_87639788_87639816_87640297_87640451_87640801_87640848_87641968_87642059_87643375_87643469_87645894_87646015_87646460_87646560_87647304_87647404_87648780_87648880_87649920_87650119_87651526_87651725_87658028_87658128_87668596_87668675_87681403_87681627_87686550_87686740_87697006_87697205_87698655_87698795_87700116_87700238_87703028_87703218_87706131
transcript_196043.known	chr9	+	5912	26	FSM	ENSG00000196730.13	ENST00000408954.8	5912	26	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_2	34.3452121845243	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTTTGATCTTTAATTC	87493961	True	NA	19	True	AATAAA	-19	NA	87497866	87708634	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_87498108_87498969_87499140_87604953_87605176_87637942_87638082_87639353_87639484_87639649_87639699_87639788_87639816_87640297_87640451_87640801_87640848_87641968_87642059_87643375_87643469_87645894_87646015_87646460_87646560_87647304_87647404_87648780_87648880_87649920_87650119_87651526_87651725_87658028_87658128_87668596_87668675_87681403_87681627_87686550_87686740_87697006_87697205_87698655_87698795_87700116_87700238_87703028_87703218_87706131
transcript_196044.nnic	chr9	+	4204	26	NNC	ENSG00000196730.13	novel	5912	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_25	95.7679361790782	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTTTTTTTGATCTTTAA	87493961	True	NA	16	True	AATAAA	-16	NA	87497866	87708631	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_87498108_87498969_87499140_87604953_87605176_87637942_87638082_87639353_87639484_87639649_87639699_87639788_87639816_87640297_87640451_87640801_87640848_87641968_87642059_87643375_87643469_87645894_87646015_87646460_87646560_87647304_87647404_87648780_87648880_87649920_87650119_87651526_87651725_87658028_87658128_87668596_87668675_87681403_87681627_87686550_87686740_87697006_87697205_87698655_87698795_87700116_87700238_87703028_87703218_87707836
transcript_196056.nnic	chr9	+	3400	20	NNC	ENSG00000196730.13	novel	5912	26	NA	NA	0	5591	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_19	112.395448493724	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTTTGCTTTTACTAAAC	87493961	True	NA	NA	False	NA	NA	NA	87497866	87674539	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_87498108_87498969_87499140_87604953_87605176_87637942_87638082_87639353_87639484_87639649_87639699_87639788_87639816_87640297_87640451_87640801_87640848_87641968_87642059_87643375_87643469_87645894_87646015_87646460_87646560_87647304_87647404_87648780_87648880_87649920_87650119_87651526_87651725_87658028_87658128_87668596_87668675_87673489
transcript_196059.known	chr9	+	2499	16	FSM	ENSG00000196730.13	ENST00000469067.5	2499	16	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_2	35.9767826367074	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGACAATAAACCACTC	87497562	True	NA	NA	False	AATAGA	-34	NA	87497735	87650511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_87498108_87498969_87499140_87604953_87605176_87637942_87638082_87639353_87639484_87639649_87639699_87639788_87639816_87640297_87640451_87640801_87640848_87641968_87642059_87643375_87643469_87645894_87646015_87646460_87646560_87647304_87647404_87648780_87648880_87649920
transcript_19606.known	chr1	+	5087	18	FSM	ENSG00000116141.17	ENST00000677041.1	5087	18	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	25.8842245312618	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTATGTGATACCAGGATT	220528350	True	NA	NA	False	AATAAA	-19	NA	220528376	220664373	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_220528874_220576645_220576737_220579353_220579558_220581064_220581119_220598330_220598380_220599797_220599864_220604066_220604138_220615938_220615996_220618309_220618547_220618635_220618756_220631034_220631135_220632200_220632314_220635375_220635530_220635832_220636027_220650619_220650721_220651985_220652151_220653100_220653353_220661811
transcript_196061.known	chr9	+	579	2	FSM	ENSG00000196730.13	ENST00000470267.1	579	2	0	0	0	0	multi-exon	FALSE	canonical	3	481	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATGCACAGTATATTGAT	87494006	True	NA	NA	False	NA	NA	NA	87497911	87499352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_87498108_87498969
transcript_196064.known	chr9	+	1813	8	FSM	ENSG00000135047.16	ENST00000676531.1	1813	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	65.8870400064863	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGGGCTTCTTTCTAT	NA	False	NA	33	True	AATAAA	-18	NA	87725734	87731393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_87726250_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380_87730499_87731007
transcript_196066.known	chr9	+	2129	8	FSM	ENSG00000135047.16	ENST00000679149.1	2129	8	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	45.4263251915468	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGCTGTGCCAGTGGCT	NA	False	NA	7	True	AATAAA	-24	NA	87725550	87731466	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_87726309_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380_87730499_87731007
transcript_196067.known	chr9	+	1654	8	FSM	ENSG00000135047.16	ENST00000343150.10	1654	8	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	46.7756259570459	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTGCCAGTGGCTCAC	87723395	True	NA	10	True	AATAAA	-27	NA	87726118	87731469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_87726399_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380_87730499_87731007
transcript_196070.nnic	chr9	-	2320	9	NNC	ENSG00000156345.18	novel	2149	8	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	12.2365998136737	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTGCTTTTTCCTTATT	NA	False	NA	NA	False	AATAAA	-17	NA	87974795	87966610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_87967660_87968094_87968174_87969193_87969350_87969795_87969920_87970567_87970631_87970775_87970898_87971146_87971336_87973921_87974036_87974371
transcript_196071.known	chr9	-	2149	8	FSM	ENSG00000156345.18	ENST00000325303.9	2149	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	9.89743318610787	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACTAGAGAAACTTATTC	-87974262	True	NA	NA	False	AATAAA	-29	NA	87974533	87966440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_87967660_87969193_87969350_87969795_87969920_87970567_87970631_87970775_87970898_87971146_87971336_87973921_87974036_87974371
transcript_196074.known	chr9	-	2301	7	FSM	ENSG00000156345.18	ENST00000375883.7	2301	7	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_3	10.6562449087639	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAGACTAGAGAAACT	-87974732	False	NA	NA	False	AATAAA	-24	NA	87974753	87966445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_87967660_87969193_87969350_87969795_87969920_87970775_87970898_87971146_87971336_87973921_87974036_87974371
transcript_196078.known	chr9	-	2021	7	FSM	ENSG00000156345.18	ENST00000486228.7	2021	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	10.4043260233424	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGGGTAGCACCAGGCAT	-87974672	True	NA	NA	False	NA	NA	NA	87974701	87966881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_87967660_87969193_87969350_87969795_87969920_87970567_87970898_87971146_87971336_87973921_87974036_87974371
transcript_19608.known	chr1	+	5273	17	FSM	ENSG00000116141.17	ENST00000402574.5	5273	17	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_16	17.1444916445487	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTGGGGCACAGCATT	220526534	True	NA	NA	False	ATTAAA	-14	NA	220528182	220664456	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_220528874_220579353_220579558_220581064_220581119_220598330_220598380_220599797_220599864_220604066_220604138_220615938_220615996_220618309_220618547_220618635_220618756_220631034_220631135_220632200_220632314_220635375_220635530_220635832_220636027_220650619_220650721_220651985_220652151_220653100_220653353_220661811
transcript_196081.known	chr9	-	1907	6	FSM	ENSG00000156345.18	ENST00000375871.8	1907	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	10.2878569196893	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGATAAAAACAGACTAGAGA	-87974466	False	NA	NA	False	AATAAA	-20	NA	87974487	87966449	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_87967660_87969193_87969350_87970775_87970898_87971146_87971336_87973921_87974036_87974371
transcript_196083.known	chr9	-	3540	5	FSM	ENSG00000156345.18	ENST00000459720.5	3540	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	6.9462219947249	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACTAGAGAAACTTATTC	-87974664	False	NA	NA	False	AATAAA	-29	NA	87974685	87966440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_87967660_87969193_87970898_87971146_87971336_87973921_87974036_87974371
transcript_196084.known	chr9	-	1860	7	FSM	ENSG00000156345.18	ENST00000605159.5	1860	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13.8041861605658	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTGCTTTTTCCTTATT	-87974234	True	NA	NA	False	AATAAA	-17	NA	87974505	87966610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_87967632_87969193_87969350_87969795_87969920_87970775_87970898_87971146_87971336_87973921_87974036_87974371
transcript_19609.known	chr1	+	4971	17	FSM	ENSG00000116141.17	ENST00000677505.1	4971	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	20.276891866112	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTATGTTCACCGGCTA	220526717	False	NA	NA	False	AATAAA	-4	NA	220528365	220664358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_220528874_220579353_220579558_220581064_220581119_220598330_220598380_220604066_220604138_220615938_220615996_220618309_220618547_220618635_220618756_220631034_220631135_220632200_220632314_220635375_220635530_220635832_220636027_220650619_220650721_220651985_220652151_220653100_220653353_220657789_220657835_220661811
transcript_196090.nic	chr9	+	4689	7	NIC	ENSG00000106723.17	novel	4459	6	NA	NA	-114	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	303.783731551832	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTGACTGTAAAGTTTGT	88374963	True	NA	18	True	AATAAA	-15	NA	88388315	88478694	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_88388539_88418849_88418952_88426381_88426592_88448940_88448990_88462495_88462750_88468371_88468606_88475077
transcript_196093.nnic	chr9	+	4479	6	NNC	ENSG00000106723.17	novel	4459	6	NA	NA	-124	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	293.831516349081	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTGACTGTAAAGTTTGT	88388206	False	NA	18	True	AATAAA	-15	NA	88388305	88478694	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_88388539_88426381_88426592_88448940_88448990_88462495_88462632_88468371_88468606_88475077
transcript_196095.known	chr9	+	4459	6	FSM	ENSG00000106723.17	ENST00000375859.4	4459	6	0	0	0	0	multi-exon	FALSE	canonical	3	542	junction_4	95.975830290756	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTGACTGTAAAGTTTGT	88375091	True	NA	18	True	AATAAA	-15	NA	88388443	88478694	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_88388539_88426381_88426592_88448940_88448990_88462495_88462750_88468371_88468606_88475077
transcript_19610.known	chr1	+	5169	16	FSM	ENSG00000116141.17	ENST00000366918.8	5169	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	24.9206741481847	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGGCACAGCATTTTATT	220526577	False	NA	NA	False	ATTAAA	-19	NA	220528225	220664461	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_220528874_220579353_220579558_220581064_220581119_220598330_220598380_220604066_220604138_220615938_220615996_220618309_220618547_220618635_220618756_220631034_220631135_220632200_220632314_220635375_220635530_220635832_220636027_220650619_220650721_220651985_220652151_220653100_220653353_220661811
transcript_196100.known	chr9	+	706	5	FSM	ENSG00000106723.17	ENST00000485565.6	706	5	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_3	289.248163347669	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTCCGTCTATTTCATC	88375099	True	NA	NA	False	NA	NA	NA	88388451	88475203	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_88388539_88426381_88426592_88448940_88448990_88468371_88468606_88475077
transcript_196101.known	chr9	+	814	5	FSM	ENSG00000106723.17	ENST00000485804.5	814	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	265.796327100282	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTCTACGATTTGGTG	88375077	True	NA	NA	False	NA	NA	NA	88388429	88475245	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_88388539_88448940_88448990_88462495_88462750_88468371_88468606_88475077
transcript_196112.known	chr9	+	1234	2	FSM	ENSG00000130045.17	ENST00000375854.8	1154	2	-73	-7	0	7	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTATTGCCTTCTTTCTCA	88535008	False	NA	NA	False	AATAAA	-30	NA	88535104	88544980	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_88535737_88544378
transcript_196113.known	chr9	+	994	3	FSM	ENSG00000130045.17	ENST00000649870.2	989	3	0	-5	0	5	multi-exon	FALSE	canonical	1	1	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTATTGCCTTCTTTCT	88533936	True	NA	NA	False	AATAAA	-28	NA	88534032	88544978	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_88534089_88535398_88535737_88544378
transcript_196114.known	chr9	+	4330	2	FSM	ENSG00000213694.6	ENST00000358157.3	4330	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACCTTTCCCCTTTCTTCT	88990848	True	NA	NA	False	ATTAAA	-20	NA	88991467	89005155	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_88991696_89001053
transcript_196119.known	chr9	+	616	3	FSM	ENSG00000123975.5	ENST00000314355.7	616	3	0	0	0	0	multi-exon	FALSE	canonical	3	5422	junction_1	153.5	1334	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGTTTCAAGTTTTTGA	89279518	True	NA	26	True	AATAAA	-19	NA	89311194	89316703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_89311352_89315169_89315298_89316372
transcript_196121.known	chr9	+	3481	17	FSM	ENSG00000187742.15	ENST00000375807.8	3481	17	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_6	64.5822815774575	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGGCTTCTCAGTGGTC	89308888	True	NA	36	True	AATAAA	-36	NA	89318499	89359663	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_89318613_89319651_89319798_89325426_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334521_89334731_89338457_89338581_89339863_89339954_89341346_89341480_89346881_89347049_89348078_89348215_89349775_89349930_89350631_89350853_89357410_89357566_89357998_89358192_89358720
transcript_196122.nic	chr9	+	3386	17	NIC	ENSG00000187742.15	novel	3481	17	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	126	junction_6	65.5186042281122	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTCAGACTCTGGTG	89318429	False	NA	15	True	AATAAA	-15	NA	89318459	89359642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_89318613_89319651_89319798_89325426_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334635_89334731_89338457_89338581_89339863_89339954_89341346_89341480_89346881_89347049_89348078_89348215_89349775_89349930_89350631_89350853_89357410_89357566_89357998_89358192_89358720
transcript_196123.known	chr9	+	3320	17	FSM	ENSG00000187742.15	ENST00000339901.8	3320	17	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	87.3012027408558	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTCAGACTCTGGTG	89308907	True	NA	15	True	AATAAA	-15	NA	89318518	89359642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_89318613_89319651_89319798_89325547_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334521_89334731_89338457_89338581_89339863_89339954_89341346_89341480_89346881_89347049_89348078_89348215_89349775_89349930_89350631_89350853_89357410_89357566_89357998_89358192_89358720
transcript_196124.nic	chr9	+	3265	17	NIC	ENSG00000187742.15	novel	3320	17	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_2	87.9532679537833	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTCAGACTCTGGTG	89318429	False	NA	15	True	AATAAA	-15	NA	89318459	89359642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_89318613_89319651_89319798_89325547_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334635_89334731_89338457_89338581_89339863_89339954_89341346_89341480_89346881_89347049_89348078_89348215_89349775_89349930_89350631_89350853_89357410_89357566_89357998_89358192_89358720
transcript_196125.known	chr9	+	3584	17	FSM	ENSG00000187742.15	ENST00000534113.6	3584	17	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	100.438083383496	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAGGCTTCTCAGTGGT	89318773	True	NA	35	True	AATAAA	-35	NA	89318850	89359662	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_89319068_89319651_89319798_89325426_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334521_89334731_89338457_89338581_89339863_89339954_89341346_89341480_89346881_89347049_89348078_89348215_89349775_89349930_89350631_89350853_89357410_89357566_89357998_89358192_89358720
transcript_196132.nic	chr9	+	1259	8	ISM	ENSG00000187742.15	ENST00000375807.8	3481	17	-40	21153	-40	0	5prime_fragment	FALSE	canonical	3	131	junction_6	64.8181128628568	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAGAAAAAGAAAGAAAAAT	89318429	False	NA	NA	False	AAGAAA	-4	NA	89318459	89338510	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_89318613_89319651_89319798_89325426_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334521_89334731_89338457
transcript_196133.nic	chr9	+	1145	8	NIC	ENSG00000187742.15	novel	3481	17	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	126	junction_6	66.4889126862824	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAGAAAAAGAAAGAAAAAT	89318429	False	NA	NA	False	AAGAAA	-4	NA	89318459	89338510	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_89318613_89319651_89319798_89325426_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334635_89334731_89338457
transcript_196134.nic	chr9	+	1138	8	ISM	ENSG00000187742.15	ENST00000339901.8	3320	17	-59	21132	-40	0	5prime_fragment	FALSE	canonical	3	78	junction_2	96.9159113745056	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAGAAAAAGAAAGAAAAAT	89318429	False	NA	NA	False	AAGAAA	-4	NA	89318459	89338510	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_89318613_89319651_89319798_89325547_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334521_89334731_89338457
transcript_196135.nic	chr9	+	1024	8	NIC	ENSG00000187742.15	novel	3320	17	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_2	97.8401445090461	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAGAAAAAGAAAGAAAAAT	89318429	False	NA	NA	False	AAGAAA	-4	NA	89318459	89338510	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_89318613_89319651_89319798_89325547_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334635_89334731_89338457
transcript_196148.nic	chr9	+	882	2	ISM	ENSG00000187742.15	ENST00000339901.8	3320	17	-59	39262	-40	-10065	5prime_fragment	FALSE	canonical	3	320	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGTTTCAAGGTTCATTT	89318429	False	NA	NA	False	NA	NA	NA	89318459	89320380	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_89318613_89319651
transcript_19615.known	chr1	+	2672	13	FSM	ENSG00000116141.17	ENST00000678922.1	2672	13	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	8.99845665779539	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATGTTCTTTGGCATAA	220528628	True	NA	NA	False	TTTAAA	-15	NA	220528662	220637068	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_220528874_220579353_220579558_220581064_220581119_220598330_220598380_220599797_220599864_220604066_220604138_220615938_220615996_220618309_220618547_220618635_220618756_220631034_220631135_220632200_220632314_220635375_220635530_220635832
transcript_196152.known	chr9	-	4562	16	FSM	ENSG00000187764.12	ENST00000422704.7	4562	16	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_14	32.7859048305145	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGGGAAGACATTCCTTA	-89496139	True	NA	0	True	AATAAA	-21	NA	89498113	89377234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_89379630_89381054_89381099_89381173_89381347_89386366_89386483_89387385_89387609_89388635_89388793_89388871_89389048_89391263_89391416_89392422_89392537_89393561_89393656_89396736_89396836_89399275_89399339_89402870_89403017_89405350_89405700_89455887_89455954_89497918
transcript_196153.known	chr9	+	1066	4	FSM	ENSG00000130222.11	ENST00000252506.11	1066	4	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_2	9.53356643071673	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGCTCTTTATTGAGGG	89604164	True	NA	NA	False	AATAAA	-15	NA	89605011	89606555	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_89605175_89605431_89605534_89605666_89605881_89605968
transcript_196157.nnic	chr9	+	968	3	NIC	ENSG00000130222.11	novel	1066	4	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	49.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGCTCTTTATTGAGGG	89604160	True	NA	NA	False	AATAAA	-15	NA	89605007	89606555	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_89605175_89605666_89605881_89605968
transcript_196164.nnic	chr9	+	1895	3	Antisense	novelGene_ENSG00000231107.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_2	10	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTTGCATATGGATTTCT	90412920	True	NA	19	True	AATAAA	-30	NA	90413039	90429457	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr9_+_90413293_90427768_90428028_90428074
transcript_196166.nnic	chr9	+	3124	3	Antisense	novelGene_ENSG00000231107.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	69	junction_1	20	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTGCATATGGATTTC	90412920	True	NA	18	True	AATAAA	-29	NA	90413039	90429456	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr9_+_90415122_90427768_90427834_90428479
transcript_196170.known	chr9	-	4105	2	FSM	ENSG00000165023.7	ENST00000375765.5	4105	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGAAGGTGGTGCTATTT	-90642811	True	NA	NA	False	AATAAA	-21	NA	90642824	90609831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_90613864_90642751
transcript_196171.known	chr9	+	4973	14	FSM	ENSG00000165025.15	ENST00000375754.9	4973	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	9.90069031123857	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGATGATTTTCATGG	90801710	False	NA	14	True	AATAAA	-14	NA	90801818	90898549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_90801894_90843857_90844316_90845433_90845595_90862205_90862345_90864588_90864668_90865047_90865098_90867130_90867200_90874203_90874292_90874671_90874850_90877570_90877781_90878763_90878954_90887748_90887890_90888514_90888628_90895527
transcript_196174.known	chr9	+	4936	13	FSM	ENSG00000165025.15	ENST00000375751.8	4936	13	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_8	6.37867541108654	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGATGATTTTCATGG	90801678	True	NA	14	True	AATAAA	-14	NA	90801786	90898549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_90801894_90843857_90844316_90845433_90845595_90862205_90862345_90864588_90864668_90865047_90865098_90874203_90874292_90874671_90874850_90877570_90877781_90878763_90878954_90887748_90887890_90888514_90888628_90895527
transcript_196177.nic	chr9	+	2580	13	NIC	ENSG00000165025.15	novel	4908	13	NA	NA	-40	-2402	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	7.55489171920345	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTTTGACCAGTGCAGT	90801778	False	NA	NA	False	AATAAA	-27	NA	90801886	90896147	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_90802040_90843857_90844316_90845433_90845595_90862205_90862345_90864588_90864668_90865047_90865098_90874203_90874292_90874671_90874850_90877570_90877781_90878763_90878954_90887748_90887890_90888514_90888628_90895527
transcript_196178.nic	chr9	+	2648	13	NIC	ENSG00000165025.15	novel	4908	13	NA	NA	-40	-2334	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	7.55489171920345	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGGATACTGCTTTTGC	90801778	False	NA	NA	False	AAGAAA	-18	NA	90801886	90896215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_90802040_90843857_90844316_90845433_90845595_90862205_90862345_90864588_90864668_90865047_90865098_90874203_90874292_90874671_90874850_90877570_90877781_90878763_90878954_90887748_90887890_90888514_90888628_90895527
transcript_196182.known	chr9	-	1434	3	FSM	ENSG00000230537.2	ENST00000665623.1	1434	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTTTCCAATTATCAGAAA	-91118076	True	NA	NA	False	AATGAA	-3	NA	91118087	91104326	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_91105383_91106464_91106672_91117916
transcript_196188.known	chr9	-	1574	10	FSM	ENSG00000148090.12	ENST00000375731.9	1574	10	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_9	28.9473766908843	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGAATTTTTCTCTTAC	-91355293	True	NA	93	True	AATAAA	-17	NA	91361918	91213822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_91214426_91216058_91216107_91217276_91217328_91220804_91220993_91296020_91296078_91297983_91298077_91325317_91325405_91355882_91355971_91356087_91356156_91361627
transcript_19619.known	chr1	+	1220	3	FSM	ENSG00000116141.17	ENST00000485104.2	1220	3	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	2.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCAGAATTGACCTCTGA	220526572	True	NA	NA	False	NA	NA	NA	220528220	220581427	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_220528874_220579353_220579558_220581064
transcript_196192.known	chr9	-	1490	9	FSM	ENSG00000148090.12	ENST00000303617.5	1490	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	92.5262631634932	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTTACCCCATTCT	-91355288	True	NA	NA	False	AATAAA	-25	NA	91361913	91213814	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_91214426_91216058_91216107_91217276_91217328_91220804_91220993_91296020_91296078_91297983_91298077_91355882_91355971_91356087_91356156_91361627
transcript_19620.known	chr1	+	2891	2	FSM	ENSG00000162817.7	ENST00000294889.6	2891	2	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	0	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTGGTGTGAAGGGTT	220688446	True	NA	17	True	AATAAA	-18	NA	220690362	220699153	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_220690712_220696611
transcript_196203.known	chr9	-	2055	2	FSM	ENSG00000165030.4	ENST00000297689.4	2055	2	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGCTCCATTGCATTTG	-91422770	True	NA	0	True	AATAAA	-22	NA	91423832	91409044	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_91410907_91423639
transcript_196207.known	chr9	-	4158	9	FSM	ENSG00000169071.15	ENST00000375708.4	4158	9	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	13.3644818455487	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATTGGCTCTCTTGCAG	-91948750	True	NA	-8	True	AATAAA	-14	NA	91950228	91722600	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_91725108_91726540_91726744_91730909_91731156_91733121_91733437_91737390_91737519_91756070_91756102_91757271_91757560_91775740_91775819_91949866
transcript_196209.nnic	chr9	-	4178	9	NNC	ENSG00000169071.15	novel	4158	9	NA	NA	-55	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	28.589497634621	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGATTGGCTCTCTTGCA	-91948805	True	NA	-9	True	AATAAA	-13	NA	91950283	91722601	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_91725108_91726540_91726744_91730943_91731156_91733121_91733437_91737390_91737519_91756070_91756102_91757271_91757560_91775740_91775819_91949866
transcript_196213.nic	chr9	-	1474	7	ISM	ENSG00000169071.15	ENST00000375708.4	4158	9	-43	8326	-43	-8325	5prime_fragment	FALSE	canonical	3	62	junction_1	11.9675487140108	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGTACCCTCGTGTAGTA	-91948793	True	NA	-6	True	AATAAA	-21	NA	91950271	91730926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_91731156_91733121_91733437_91737390_91737519_91756070_91756102_91757271_91757560_91775740_91775819_91949866
transcript_19622.known	chr1	+	2146	8	FSM	ENSG00000117791.16	ENST00000366913.8	2146	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_4	1.9059520091609	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGTATTTATGAGTCT	220747759	True	NA	13	True	AATAAA	-23	NA	220748321	220784815	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_220748804_220754946_220755121_220761657_220761821_220762909_220763051_220780017_220780080_220780167_220780240_220781777_220781933_220783918
transcript_196223.known	chr9	-	2783	15	FSM	ENSG00000090054.16	ENST00000262554.7	2783	15	0	0	0	0	multi-exon	FALSE	canonical	3	688	junction_4	56.4137864898506	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTAGTCTATTTGCATAT	-92105036	True	NA	-11	True	AATAAA	-14	NA	92115413	92031146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_92032559_92034809_92034884_92038247_92038366_92045998_92046054_92047171_92047269_92047612_92047709_92049959_92050068_92055404_92055495_92059178_92059309_92067965_92068099_92080015_92080089_92080869_92080964_92108739_92108835_92112454_92112563_92115313
transcript_196230.known	chr9	-	946	6	FSM	ENSG00000090054.16	ENST00000337841.4	946	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	298.956451678167	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTGCTGGAAATAGCAT	-92105006	True	NA	NA	False	AATAAA	-27	NA	92115383	92079060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_92079567_92080015_92080089_92080869_92080964_92108739_92108835_92112454_92112563_92115313
transcript_196248.known	chr9	-	4535	35	FSM	ENSG00000196305.19	ENST00000683565.1	4535	35	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_33	454.412598514369	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTAGACATCTAATAAAACT	-92275067	True	NA	-35	True	CATAAA	-33	NA	92293693	92210237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92290835_92290923_92293610
transcript_196249.known	chr9	-	4443	34	FSM	ENSG00000196305.19	ENST00000683679.1	4443	34	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	416.581132818549	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATATAAATGTGTTGAAAG	-92275063	True	NA	-22	True	AATAAA	-8	NA	92293689	92210348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_92210890_92222519_92222673_92223345_92223430_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293440
transcript_196250.known	chr9	-	4300	34	FSM	ENSG00000196305.19	ENST00000683469.1	4300	34	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	379.685155442696	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATATAAATGTGTTGAAAG	-92275090	True	NA	-22	True	AATAAA	-8	NA	92293716	92210348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_92210890_92222519_92222673_92223345_92223430_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293610
transcript_196252.known	chr9	-	4370	34	FSM	ENSG00000196305.19	ENST00000684557.1	4370	34	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_12	362.996712666651	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGGACTAGACATCTAATA	-92275069	True	NA	-40	True	CATAAA	-28	NA	92293695	92210242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250760_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293610
transcript_196253.known	chr9	-	4656	34	FSM	ENSG00000196305.19	ENST00000375643.7	4656	34	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_33	329.625992248549	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAGGTGATAATTTGAGT	-92275074	True	NA	-4	True	AATAAA	-15	NA	92293700	92210206	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293440
transcript_196254.known	chr9	-	4597	34	FSM	ENSG00000196305.19	ENST00000683817.1	4597	34	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	390.691680204117	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGGACTAGACATCTAATA	NA	False	NA	-40	True	CATAAA	-28	NA	92293854	92210242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253447_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293610
transcript_196261.known	chr9	-	4186	33	FSM	ENSG00000196305.19	ENST00000627121.3	4186	33	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_31	395.773302328413	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGTGTTGAAAGTAAT	-92275069	True	NA	-18	True	AATAAA	-12	NA	92293695	92210344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92289300_92289427_92293610
transcript_196262.known	chr9	-	4406	33	FSM	ENSG00000196305.19	ENST00000683537.1	4406	33	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_29	394.683515171887	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTAGACATCTAATAAAACT	-92275108	True	NA	-35	True	CATAAA	-33	NA	92293734	92210237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92287790_92287911_92288125_92288283_92289300_92289427_92293610
transcript_19627.known	chr1	+	1516	9	FSM	ENSG00000286231.1	ENST00000651706.1	1516	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	67.4235678379601	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGGAGCAGCGGCGG	220784838	False	NA	NA	False	NA	NA	NA	220786989	220884503	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_220787220_220791490_220791665_220796642_220796806_220797873_220798015_220805051_220805114_220805202_220805275_220881193_220881374_220882163_220882349_220884194
transcript_196273.known	chr9	-	4587	35	FSM	ENSG00000196305.19	ENST00000447699.7	4587	35	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_5	424.019663153119	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCCCAGGTGATAATTT	-92275130	True	NA	-8	True	AATAAA	-11	NA	92293756	92210210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240642_92240692_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293610
transcript_19628.known	chr1	+	7287	7	FSM	ENSG00000186205.13	ENST00000366910.10	7287	7	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_4	11.5385826204473	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTGCCCAGCCAACATT	220784761	True	NA	13	True	AATAAA	-19	NA	220786912	220819659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_220787220_220791490_220791665_220796642_220796806_220797873_220798015_220805051_220805114_220805202_220805275_220813291
transcript_196291.nic	chr9	-	2615	20	ISM	ENSG00000196305.19	ENST00000683469.1	4300	34	-27	45993	-9	-15579	5prime_fragment	FALSE	canonical	3	1048	junction_19	116.239007760767	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGCTGGCCATGGAGGCG	-92275117	True	NA	NA	False	AATATA	-19	NA	92293743	92256341	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293610
transcript_196310.known	chr9	-	1149	4	FSM	ENSG00000196305.19	ENST00000490438.2	1149	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	206.953027413361	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCATTGCCATGAAAAAAGC	-92275082	True	NA	NA	False	AAAAAG	-8	NA	92293708	92280258	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_92280894_92287790_92287911_92289300_92289427_92293440
transcript_196312.known	chr9	-	4075	17	FSM	ENSG00000198000.12	ENST00000442668.7	4075	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	59.7821239481335	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTGTTTTGGTGAATG	-92321609	True	NA	-1	True	GATAAA	-24	NA	92325350	92297357	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_92297887_92298256_92298337_92298883_92298955_92299889_92300017_92301550_92301823_92305752_92305831_92306885_92307025_92310170_92310262_92310552_92310676_92311145_92311260_92314266_92316139_92318617_92318687_92319220_92319357_92321667_92321747_92323440_92323504_92324022_92324210_92325305
transcript_196315.known	chr9	-	4598	17	FSM	ENSG00000198000.12	ENST00000544867.5	4598	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	68.791322808549	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAACAAGATAGTCCTTG	-92321597	True	NA	NA	False	ATTAAA	-18	NA	92325338	92297616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_92297887_92298256_92298337_92298883_92298955_92299889_92300811_92301550_92301823_92305752_92305831_92306885_92307025_92310170_92310262_92310552_92310676_92311145_92311260_92314266_92316139_92318617_92318687_92319220_92319357_92321667_92321747_92323440_92323504_92324022_92324210_92325305
transcript_196323.known	chr9	-	3136	13	FSM	ENSG00000198000.12	ENST00000432670.6	3136	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	59.477061404657	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACGAAAAAAGAAAAGGG	-92321617	True	NA	NA	False	AGTAAA	-3	NA	92325358	92301816	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_92301823_92305752_92305831_92306885_92307025_92310170_92310262_92310552_92310676_92311145_92311260_92314266_92316139_92318617_92318687_92319220_92319357_92321667_92321747_92323440_92323504_92324022_92324210_92325179
transcript_196324.nic	chr9	-	3281	12	ISM	ENSG00000198000.12	ENST00000544867.5	4598	17	-297	8136	1	1197	5prime_fragment	FALSE	canonical	0	0	junction_6	55.1847385778063	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTAGAGCTACTTCTTT	-92325590	True	NA	NA	False	AAAAAG	-22	NA	92325635	92305752	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_92305831_92306885_92307025_92310170_92310262_92310552_92310676_92311145_92311260_92314266_92316139_92318617_92318687_92319220_92319357_92321667_92321747_92323440_92323504_92324022_92324210_92325305
transcript_19633.known	chr1	+	2237	4	FSM	ENSG00000136630.13	ENST00000366903.8	2237	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.69967317119759	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCGCTTGGCTTTGCTGGG	NA	False	NA	NA	False	AATAAA	-22	NA	220879442	220885059	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_220880450_220881193_220881374_220882163_220882349_220884194
transcript_196332.known	chr9	-	1044	8	FSM	ENSG00000198000.12	ENST00000445919.6	1044	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	58.4842556870249	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAAGGATGAGAGTTCCA	-92321571	True	NA	NA	False	AATAAA	-4	NA	92325312	92315956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_92316139_92318617_92318687_92319220_92319357_92319942_92320138_92321667_92321747_92323440_92323504_92324022_92324210_92325179
transcript_196334.known	chr9	-	1098	7	FSM	ENSG00000198000.12	ENST00000421075.6	1098	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	56.3079331296518	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGATTCCATTACTCCTT	-92325549	True	NA	NA	False	AATAGA	-43	NA	92325594	92315851	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_92316139_92318617_92318687_92319220_92319357_92321667_92321747_92323440_92323504_92324022_92324210_92325317
transcript_196337.known	chr9	-	769	5	FSM	ENSG00000198000.12	ENST00000543985.5	769	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	56.773673476357	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCCATAAAGGGGAACTG	-92321609	True	NA	NA	False	TATAAA	-44	NA	92325350	92319987	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_92320383_92321667_92321747_92323440_92323504_92324022_92324210_92325305
transcript_196341.known	chr9	+	3088	3	FSM	ENSG00000188312.14	ENST00000375576.1	3088	3	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	15	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCAATGCTCGCATGAGTG	NA	False	NA	NA	False	ATTAAA	-21	NA	92610543	92615164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_92611394_92612522_92612615_92613018
transcript_196349.known	chr9	-	4268	13	FSM	ENSG00000127080.10	ENST00000287996.8	4268	13	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_4	10.1280002413551	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTTCATCCTCCACGTT	-92667679	True	NA	NA	False	AATAAA	-21	NA	92670131	92613182	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_92616058_92619485_92619566_92634385_92634489_92635157_92635309_92638000_92638281_92640709_92640783_92642751_92642811_92648058_92648149_92649452_92649575_92652572_92652640_92656455_92656552_92658633_92658682_92669907
transcript_19635.known	chr1	-	2589	4	FSM	ENSG00000143507.18	ENST00000366899.4	2589	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2.86744175568088	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGGATGTGTCTTTTTTT	-221741903	True	NA	NA	False	TATAAA	-10	NA	221742089	221701423	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_221702678_221706094_221706467_221738933_221739788_221741980
transcript_196352.nic	chr9	-	2964	13	NIC	ENSG00000127080.10	novel	4268	13	NA	NA	-131	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_4	22.7205242506026	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTCTAGAATTTATTGTT	-92670242	True	NA	-9	True	NA	NA	NA	92670262	92614555	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_92616058_92619485_92619566_92634385_92634489_92635157_92635247_92638000_92638281_92640709_92640783_92642751_92642811_92648058_92648149_92649452_92649575_92652572_92652640_92656455_92656552_92658633_92658682_92669907
transcript_196361.known	chr9	-	6448	7	FSM	ENSG00000185963.14	ENST00000356884.11	6448	7	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_5	12.7235564559949	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTCTCTGTGGTTGT	-92762629	True	NA	-5	True	AATAAA	-24	NA	92764833	92711362	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_92715464_92717796_92717949_92718538_92719583_92720299_92720756_92722655_92722809_92729023_92729237_92764504
transcript_196368.known	chr9	-	4636	8	FSM	ENSG00000185963.14	ENST00000375512.3	4636	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	60.0707066374149	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTCTCTGTGGTTGT	-92762608	True	NA	-5	True	AATAAA	-24	NA	92764812	92711362	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_92713462_92715252_92715464_92717796_92717949_92718538_92719583_92720299_92720756_92722655_92722809_92729023_92729237_92764504
transcript_196369.known	chr9	-	2920	2	FSM	ENSG00000288062.1	ENST00000655112.1	2920	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATGTTACAAAATAAAAATA	-92809158	False	NA	-50	True	NA	NA	NA	92809171	92805430	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_92808088_92808908
transcript_196376.known	chr9	-	4784	5	FSM	ENSG00000127081.14	ENST00000375495.8	4784	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	9.51314879522022	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGATGGTCTGGATAATAT	-92876225	True	NA	NA	False	ATTAAA	-14	NA	92878038	92844181	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_92848552_92855810_92855904_92856191_92856319_92875014_92875060_92877889
transcript_196378.known	chr9	-	2836	4	FSM	ENSG00000127081.14	ENST00000332591.6	2836	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	11.0453610171873	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCAGTCTTTCTTGTTTC	-92876209	True	NA	-31	True	AGTAAA	-16	NA	92878022	92846068	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_92848552_92855810_92855904_92856191_92856319_92877889
transcript_196380.known	chr9	+	3246	18	FSM	ENSG00000127084.19	ENST00000375482.8	3246	18	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	4.90533217397397	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGCGCAGCCTCGGTGAT	92947448	True	NA	5	True	AATAAA	-16	NA	92947522	93036233	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_92947730_92975237_92975406_92976207_92976710_93002924_93003015_93004000_93004138_93006023_93006181_93010245_93010385_93011213_93011273_93013851_93013999_93015736_93015830_93018135_93018216_93019830_93019862_93020316_93020425_93022326_93022390_93029873_93029997_93032768_93032874_93034540_93034682_93035337
transcript_196381.known	chr9	+	3057	18	FSM	ENSG00000127084.19	ENST00000468206.6	3057	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.00864304880188	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCACCAGCAGTGGGCGCA	NA	False	NA	-6	True	AATAAA	-5	NA	92964324	93036222	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_92964354_92975237_92975406_92976207_92976710_93002924_93003015_93004000_93004138_93006023_93006181_93010245_93010385_93011213_93011273_93013851_93013999_93015736_93015830_93018135_93018216_93019830_93019862_93020316_93020425_93022326_93022390_93029873_93029997_93032768_93032874_93034540_93034682_93035337
transcript_196383.nic	chr9	+	2564	14	ISM	ENSG00000127084.19	ENST00000337352.10	3303	18	29233	0	-11936	0	3prime_fragment	FALSE	canonical	2	5	junction_4	4.07619732292055	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGGCGCAGCCTCGGTGA	NA	False	NA	4	True	AATAAA	-15	NA	93003714	93036232	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_93004138_93006023_93006181_93010245_93010385_93011213_93011273_93013851_93013999_93015736_93015830_93018135_93018216_93019830_93019862_93020316_93020425_93022326_93022390_93029873_93029997_93032768_93032874_93034540_93034682_93035337
transcript_196385.nnic	chr9	-	2844	3	Antisense	novelGene_ENSG00000127084.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCCTTTGATTAAAGGAAG	-93014345	True	NA	NA	False	AATAAA	-17	NA	93014359	93008033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr9_-_93010438_93013190_93013538_93014266
transcript_196389.known	chr9	+	1196	5	FSM	ENSG00000157303.11	ENST00000375472.8	1196	5	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_4	5.54526825320471	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACTACCTCAGCATCTT	93057890	True	NA	30	True	AATAAA	-39	NA	93058700	93085133	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_93058831_93075783_93075973_93077845_93077994_93079470_93079603_93084536
transcript_19639.known	chr1	-	1910	11	FSM	ENSG00000143498.18	ENST00000352967.9	1910	11	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	12.6728055299527	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTATATTCTACTTTT	-222588752	True	NA	-3	True	AATAAA	-24	NA	222589933	222558311	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_222558773_222561363_222561519_222563172_222563297_222564058_222564126_222569509_222569669_222570534_222570666_222577444_222577644_222579758_222579873_222584127_222584298_222588442_222588566_222589726
transcript_196391.known	chr9	+	1076	4	FSM	ENSG00000157303.11	ENST00000617293.4	1076	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	35.6931365951495	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAACTACCTCAGCATCT	93057877	True	NA	29	True	AATAAA	-38	NA	93058687	93085132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_93058831_93075783_93075973_93077845_93077994_93084536
transcript_196394.known	chr9	+	857	6	FSM	ENSG00000165233.18	ENST00000375464.7	857	6	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_2	50.4166639118457	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTCGTTCCTCAGTC	93095039	True	NA	25	True	ATTAAA	-17	NA	93096216	93113283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_93096353_93107673_93107817_93110567_93110722_93111878_93111939_93112217_93112290_93112991
transcript_196396.known	chr9	+	759	6	FSM	ENSG00000165233.18	ENST00000490488.5	759	6	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_2	66.6651333156996	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTCTCTCAGCCTGCCTC	93095137	False	NA	14	True	ATTAAA	-6	NA	93096314	93113272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_93096353_93107673_93107828_93110567_93110722_93111878_93111939_93112217_93112290_93112991
transcript_196398.known	chr9	+	660	5	FSM	ENSG00000165233.18	ENST00000468781.5	660	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	110.298175415553	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTTATAATTTGTGTAA	93095100	True	NA	27	True	NA	NA	NA	93096277	93113207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_93096353_93107673_93107817_93110567_93110722_93112217_93112290_93112991
transcript_1964.known	chr1	+	1339	8	FSM	ENSG00000187017.18	ENST00000461727.6	1339	8	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	25.9890086657527	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCGACTTACATATATTTG	6446335	True	NA	22	True	NA	NA	NA	6448042	6460399	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_6448118_6448640_6448803_6448892_6449092_6451602_6451749_6451832_6452097_6457183_6457264_6457360_6457373_6459998
transcript_196403.known	chr9	+	2291	4	FSM	ENSG00000165233.18	ENST00000466409.1	2291	4	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_2	62.744632351213	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGCCTCGTTCCTCAGT	93095040	True	NA	24	True	ATTAAA	-16	NA	93096217	93113282	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_93096353_93107673_93107817_93110567_93112290_93112991
transcript_196404.nic	chr9	+	2302	4	NIC	ENSG00000165233.18	novel	2291	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	109	junction_2	82.0609529557146	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGCCTCGTTCCTCAGT	93095040	True	NA	24	True	ATTAAA	-16	NA	93096217	93113282	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_93096353_93107673_93107828_93110567_93112290_93112991
transcript_196410.known	chr9	-	1237	4	FSM	ENSG00000131669.10	ENST00000375446.5	1237	4	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_3	16.6799946709291	379	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCATCTCCCTGTTCCC	-93130030	True	NA	-17	True	AATAAA	-25	NA	93134251	93121495	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_93122231_93124898_93125063_93126409_93126639_93134142
transcript_196414.known	chr9	+	2258	3	FSM	ENSG00000165238.17	ENST00000467401.1	2258	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	6.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGGACTTTGGTTTTTC	93306626	False	NA	12	True	AATAAA	-15	NA	93306636	93320564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_93308585_93317519_93317632_93320366
transcript_196426.known	chr9	-	1154	5	FSM	ENSG00000204352.4	ENST00000648864.1	1154	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	36.9966214673719	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAATTGCAAATGAAACCT	-93346357	False	NA	-28	True	AATAAA	-17	NA	93346414	93318198	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_93318550_93319100_93319175_93335373_93335661_93335875_93335977_93346073
transcript_196434.known	chr9	-	467	3	FSM	ENSG00000204352.4	ENST00000649569.1	467	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	22	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGGTGCGTGGGTCGC	-93346095	False	NA	NA	False	NA	NA	NA	93346152	93335373	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_93335661_93335875_93335977_93346073
transcript_19644.known	chr1	-	1966	12	FSM	ENSG00000143498.18	ENST00000350027.8	1966	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	20.3595775175767	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-222588752	True	NA	NA	False	NA	NA	NA	222589933	222557901	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_222558269_222558622_222558773_222561363_222561519_222563172_222563297_222564058_222564126_222569509_222569669_222570534_222570666_222577444_222577644_222579758_222579873_222584127_222584298_222588442_222588566_222589726
transcript_196442.known	chr9	+	5160	18	FSM	ENSG00000048828.17	ENST00000277165.11	5160	18	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_5	19.4527197198302	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGCGTGGCTTTTAAAT	93450925	True	NA	22	True	AATAAA	-24	NA	93451684	93566112	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_93452390_93471140_93471388_93476255_93476339_93497470_93497600_93498789_93498887_93515666_93515768_93515982_93516270_93527154_93527243_93529352_93529581_93532154_93532330_93543221_93543472_93550576_93550692_93556381_93556592_93557826_93558011_93558580_93558719_93561108_93561251_93562207_93562305_93564228
transcript_196446.known	chr9	+	1701	10	FSM	ENSG00000048828.17	ENST00000446420.2	1701	10	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_5	15.9660132859432	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGATCTGAAAGCAGACT	93452366	False	NA	9	True	AATAAA	-24	NA	93452383	93532589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_93452390_93471140_93471388_93476255_93476339_93497470_93497600_93498789_93498887_93515666_93515768_93515982_93516270_93527154_93527243_93529352_93529581_93532154
transcript_196457.known	chr9	-	830	4	FSM	ENSG00000188938.17	ENST00000428152.1	830	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	142.835569799683	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTACCAAGGTAGACAGAC	-93450680	False	NA	NA	False	AAGAAA	-26	NA	93451114	93447267	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_93447698_93448368_93448490_93450478_93450588_93450944
transcript_196458.known	chr9	-	1491	4	FSM	ENSG00000188938.17	ENST00000476484.5	1491	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	150.406116896887	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGCGCTTCATAGGTTC	-93447829	True	NA	NA	False	NA	NA	NA	93451562	93446923	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_93447698_93448368_93448490_93450478_93450600_93451087
transcript_19646.known	chr1	+	8126	28	FSM	ENSG00000154305.18	ENST00000344922.10	8126	28	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_6	42.7865791811485	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTTCAATTTAAGCTTC	222613604	True	NA	16	True	ATTAAA	-16	NA	222618096	222668007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_222618244_222621158_222621293_222624767_222624855_222627574_222630390_222632164_222632327_222633103_222633250_222645553_222645686_222648828_222648851_222650291_222650381_222650633_222650712_222650792_222650904_222651976_222652049_222652227_222652333_222653007_222653131_222653227_222653340_222654242_222654299_222654388_222654480_222654654_222654794_222658721_222658824_222659452_222659514_222659621_222659658_222659733_222659802_222659905_222660007_222660176_222660315_222662055_222662125_222662252_222662333_222663997_222664149_222665308
transcript_196469.known	chr9	-	1846	3	FSM	ENSG00000188938.17	ENST00000520403.1	1846	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTTTTGAAGTAAACTATA	-93447779	True	NA	NA	False	NA	NA	NA	93451512	93446532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_93447698_93450474_93450588_93450944
transcript_196470.known	chr9	-	1735	3	FSM	ENSG00000188938.17	ENST00000523407.1	1735	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	166.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAAACTATATTTTACAA	-93447791	True	NA	NA	False	NA	NA	NA	93451524	93446524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_93447698_93450474_93450600_93451087
transcript_196471.known	chr9	-	5922	3	FSM	ENSG00000188938.17	ENST00000375412.11	5922	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	20.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTGTAATTTAAAACATTA	-93453147	True	NA	-19	True	AATAAA	-16	NA	93453581	93443331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_93447698_93450478_93450600_93452146
transcript_196472.known	chr9	-	426	3	FSM	ENSG00000188938.17	ENST00000428378.1	426	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCATTCTTGAGTCCAAT	-93450549	False	NA	NA	False	AAGAAA	-22	NA	93450983	93447634	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_93447698_93450478_93450600_93450741
transcript_196477.known	chr9	-	1432	3	FSM	ENSG00000188938.17	ENST00000483149.6	1432	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGAGTTTTTATCTTTTA	-93452823	False	NA	NA	False	NA	NA	NA	93453257	93446904	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_93447698_93450478_93450600_93452739
transcript_196478.known	chr9	+	5392	22	FSM	ENSG00000197724.11	ENST00000359246.9	5392	22	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_16	6.96443833776595	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTCTGTGTCATTTCTG	93576297	True	NA	17	True	AGTAAA	-24	NA	93576583	93679587	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_93576872_93629969_93630056_93636410_93636526_93645628_93645790_93649070_93649213_93653178_93653366_93654412_93654576_93655933_93656022_93656488_93656596_93658144_93658237_93659510_93659601_93660191_93660561_93662906_93663027_93663516_93663636_93665685_93665865_93665989_93666061_93667079_93667241_93673584_93673863_93674926_93675023_93675679_93675790_93676593_93676964_93677587
transcript_196484.known	chr9	+	4332	11	FSM	ENSG00000158079.16	ENST00000650567.1	4332	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13.1700417615131	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGCAACCCATAATCCTAG	94030577	False	NA	-6	True	AATAAA	-8	NA	94031026	94109842	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_94031128_94057117_94057180_94064733_94064822_94085250_94085423_94087830_94087912_94088144_94088264_94095316_94095455_94097320_94098580_94101565_94101752_94104274_94104386_94107827
transcript_196485.known	chr9	+	4517	10	FSM	ENSG00000158079.16	ENST00000375360.7	4517	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	5.9087714668037	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTAGTCCTGTACTTCTTT	94030344	True	NA	8	True	AATAAA	-22	NA	94030793	94109856	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_94031128_94064733_94064822_94085250_94085423_94087830_94087912_94088144_94088264_94095316_94095455_94097320_94098580_94101565_94101752_94104274_94104386_94107827
transcript_196498.known	chr9	+	2374	5	FSM	ENSG00000175787.17	ENST00000395395.7	2374	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	6.04152298679729	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATACAGTCACACTACACA	94258793	True	NA	NA	False	NA	NA	NA	94259297	94301829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_94259346_94278757_94278846_94292340_94292468_94292973_94293070_94299814
transcript_19650.known	chr1	+	2735	23	FSM	ENSG00000154305.18	ENST00000340535.11	2735	23	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	49.0998518790582	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGTCCTTACAACTTTGAA	222644036	True	NA	11	True	AATAAA	-19	NA	222644302	222665823	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_222644587_222645553_222645686_222648828_222648851_222650291_222650381_222650633_222650712_222650792_222650904_222651976_222652049_222652227_222652333_222653007_222653131_222653227_222653340_222654242_222654299_222654388_222654480_222654654_222654794_222658721_222658824_222659452_222659514_222659621_222659658_222659733_222659802_222659905_222660007_222660176_222660315_222662055_222662125_222662252_222662333_222663997_222664149_222665308
transcript_196500.known	chr9	+	396	3	FSM	ENSG00000175787.17	ENST00000492115.2	396	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	5.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGCG	94258816	True	NA	NA	False	NA	NA	NA	94259320	94292623	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_94259346_94278757_94278846_94292340
transcript_196501.known	chr9	+	509	2	FSM	ENSG00000269929.4	ENST00000660581.1	509	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCCGGTTTCGGGTATTT	94165863	True	NA	NA	False	AATAAA	-17	NA	94166289	94200902	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_94166382_94200485
transcript_196502.known	chr9	+	1696	3	FSM	ENSG00000175787.17	ENST00000481550.6	1696	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATATACTTAGGTGTGTA	NA	False	NA	NA	False	AAGAAA	-9	NA	94278757	94294454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_94278846_94292340_94292468_94292973
transcript_196503.known	chr9	-	2559	7	FSM	ENSG00000130950.15	ENST00000253262.9	2559	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.10554159678513	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTCAGGGCTGCTGCCT	NA	False	NA	NA	False	AATAAA	-19	NA	94328644	94318197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_94319251_94319612_94319730_94320207_94320594_94321092_94321233_94322200_94322330_94325237_94325935_94328607
transcript_196504.known	chr9	+	3402	12	FSM	ENSG00000148110.17	ENST00000375344.8	3402	12	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_6	43.5398554001327	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTATTTTTAACAAAATTC	94367800	True	NA	NA	False	NA	NA	NA	94374568	94461042	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_94374928_94415157_94415254_94429188_94429252_94438400_94438529_94440984_94441100_94444963_94445183_94446822_94446937_94451455_94451528_94453957_94454071_94456239_94456338_94458321_94458465_94459160
transcript_196508.known	chr9	-	1487	8	FSM	ENSG00000165140.12	ENST00000415431.5	1487	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	10.0244598816279	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAAGTCTCCCTTGCT	NA	False	NA	NA	False	AATAAA	-14	NA	94640249	94603140	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_94603573_94605456_94605577_94606814_94606953_94609920_94610062_94617767_94617861_94620328_94620492_94639140_94639335_94640043
transcript_196511.known	chr9	-	1473	7	FSM	ENSG00000165140.12	ENST00000375326.9	1473	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	5.05525029603437	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCCCTTGCTTTGTGTCA	-94639251	False	267	NA	False	AATAAA	-22	NA	94639518	94603132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_94603573_94605456_94605577_94606814_94606953_94609920_94610062_94617767_94617861_94620328_94620492_94639140
transcript_196516.known	chr9	+	1164	3	FSM	ENSG00000231806.4	ENST00000452148.3	1193	3	15	14	-14	-14	multi-exon	FALSE	canonical	3	14	junction_1	13.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAATGTGTG	94553773	True	NA	NA	False	NA	NA	NA	94555068	94568127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_94555311_94558968_94559153_94567389
transcript_196521.known	chr9	+	3974	3	FSM	ENSG00000231806.4	ENST00000644721.1	3974	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	11	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTGTAAATCAAAAACTTAA	94553787	True	NA	NA	False	AATAAA	-3	NA	94555082	94570916	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_94555346_94558968_94559153_94567389
transcript_196525.known	chr9	+	3130	17	FSM	ENSG00000148120.18	ENST00000375315.8	3130	17	0	0	0	0	multi-exon	TRUE	canonical	2	12	junction_9	12.6682427747498	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTGTTTGCTTCTAAATT	94725180	True	NA	14	True	AATAAA	-23	NA	94726698	95087159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_94726752_94759648_94760581_94773001_94773169_94792764_94792919_94800756_94801003_94923985_94924176_94928424_94928532_94955176_94955280_94955907_94956016_94967757_94967802_94979366_94979428_95005157_95005221_95005541_95005617_95060693_95060811_95080693_95080781_95082574_95082720_95086681
transcript_196527.known	chr9	+	2820	15	FSM	ENSG00000148120.18	ENST00000297979.9	2820	15	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	13.0899556445204	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTGTTTGCTTCTAAATT	94725193	True	NA	14	True	AATAAA	-23	NA	94726711	95087159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_94726752_94759648_94760581_94773001_94773169_94792764_94792919_94800756_94801003_94955176_94955280_94955907_94956016_94967757_94967802_94979366_94979428_95005157_95005221_95005541_95005617_95060693_95060811_95080693_95080781_95082574_95082720_95086681
transcript_196535.known	chr9	+	1966	8	FSM	ENSG00000148120.18	ENST00000277198.6	1966	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	9.102589898328	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTGTGTCTTACTCTC	94725182	True	NA	NA	False	NA	NA	NA	94726700	94931833	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_94726752_94759648_94760581_94773001_94773169_94792764_94792919_94800756_94801003_94923985_94924176_94928424_94928532_94931714
transcript_196538.nic	chr9	+	1059	7	NIC	ENSG00000148120.18	novel	919	6	NA	NA	276	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	12.5222025041746	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTGTTTGCTTCTAAATT	95004004	True	NA	14	True	AATAAA	-23	NA	95004192	95087159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_95004287_95005157_95005221_95005541_95005617_95060693_95060811_95080693_95080781_95082574_95082720_95086681
transcript_196540.nic	chr9	+	1077	7	NIC	ENSG00000148120.18	novel	895	8	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	16.0251538387485	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTGTTTGCTTCTAAATT	95004848	True	NA	14	True	AATAAA	-23	NA	95004953	95087159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_95005066_95005157_95005221_95005541_95005617_95060693_95060811_95080693_95080781_95082574_95082720_95086681
transcript_196542.nic	chr9	+	910	6	NIC	ENSG00000148120.18	novel	919	6	NA	NA	276	-4	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	13.9370011121475	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATACGTGTTTGCTTCTA	95004004	True	NA	10	True	AATAAA	-19	NA	95004192	95087155	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_95004287_95005157_95005221_95005541_95005617_95060693_95060811_95080693_95080781_95086681
transcript_196543.known	chr9	+	478	6	FSM	ENSG00000148120.18	ENST00000471978.5	478	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	17.4539393834171	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCTCGAACTGACCCTGG	95004874	True	NA	NA	False	NA	NA	NA	95004979	95086731	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_95005066_95005157_95005221_95005541_95005617_95060693_95060811_95080693_95080781_95086681
transcript_196548.known	chr9	-	4533	15	FSM	ENSG00000158169.13	ENST00000375305.6	4533	15	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_14	10.7485167462724	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTGTATCCATTAAATAT	-95316838	False	416	-1	True	AATAAA	-18	NA	95317254	95099054	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_95101851_95107065_95107270_95111462_95111638_95114628_95114711_95117314_95117391_95125085_95125186_95126528_95126582_95135345_95135503_95149922_95150088_95171078_95171144_95172036_95172148_95240648_95240744_95247431_95247517_95249126_95249370_95317128
transcript_196549.known	chr9	-	4592	15	FSM	ENSG00000158169.13	ENST00000289081.8	4592	15	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_14	6.37637540184909	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGTATCCATTAAATATT	-95317293	True	NA	0	True	AATAAA	-19	NA	95317709	95099053	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_95101851_95107065_95107270_95111462_95111638_95114628_95114711_95117314_95117391_95125085_95125186_95126528_95126582_95135345_95135503_95149922_95150088_95171078_95171144_95172036_95172148_95240648_95240744_95247431_95247517_95249126_95249370_95317525
transcript_196560.known	chr9	-	2387	14	FSM	ENSG00000158169.13	ENST00000490972.7	2387	14	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	11.1599452820444	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCCACGTATGTATTTGA	-95317255	False	NA	NA	False	AATAAA	-18	NA	95317671	95110511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_95111346_95111462_95111638_95114628_95114711_95117314_95117391_95125085_95125186_95126528_95126582_95135345_95135503_95149922_95150088_95171078_95171144_95172036_95172148_95240648_95240744_95247431_95247517_95249126_95249370_95317525
transcript_196566.nnic	chr9	-	2751	2	NNC	ENSG00000158169.13	novel	652	7	NA	NA	-34	5800	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAAATTGTGTGTATGTG	-95426216	True	NA	NA	False	AAAAAG	-11	NA	95426830	95409033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_95411678_95426723
transcript_196568.known	chr9	-	1404	2	FSM	ENSG00000158169.13	ENST00000433644.2	1404	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGTCTATGGTATTCTT	-95426182	True	NA	-8	True	AATAAA	-18	NA	95426796	95414833	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_95416165_95426723
transcript_196570.known	chr9	-	8662	24	FSM	ENSG00000185920.18	ENST00000331920.11	8662	24	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_23	8.31401667943574	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCATCAGTGAAGGTGTC	-95508727	True	NA	-9	True	AATAAA	-18	NA	95509266	95442979	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_95446392_95446910_95447452_95449068_95449324_95449840_95449941_95453477_95453621_95456275_95456414_95458012_95458294_95459599_95459784_95461855_95461999_95467115_95467426_95468750_95469154_95469812_95469932_95476033_95476160_95476758_95476858_95477546_95477703_95478054_95478187_95478999_95479148_95479968_95480091_95480389_95480589_95481948_95482041_95482133_95482204_95485684_95485875_95506406_95506600_95508160
transcript_196577.known	chr9	+	1402	1	FSM	ENSG00000271155.1	ENST00000604104.1	1402	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGGCTGCCAAAAAAGGAAA	95505977	True	NA	NA	False	NA	NA	NA	95506234	95507636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_95506200_95507600
transcript_196578.known	chr9	-	962	2	FSM	ENSG00000175611.13	ENST00000670189.2	1384	2	422	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGAAGTTAAAGAGTAATT	-95874795	True	NA	NA	False	AATAAA	-13	NA	95875587	95870087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_95870442_95874979
transcript_196579.known	chr9	+	10245	19	FSM	ENSG00000182150.19	ENST00000653738.2	10245	19	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	9.11331274212635	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACACATAGCATTGTTTT	95872693	True	NA	18	True	ATTAAA	-15	NA	95875690	96018447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_95876085_95880868_95881294_95897848_95897972_95907077_95907272_95915667_95915830_95916226_95916435_95921174_95921316_95922304_95922419_95923259_95923380_95928078_95928151_95928718_95928865_95941453_95941550_95955913_95956014_95966561_95966715_95970575_95970657_95971932_95973089_95978060_95978216_96004519_96004702_96012224
transcript_196588.nic	chr9	+	3048	16	ISM	ENSG00000182150.19	ENST00000683350.1	4826	18	-71	8320	-43	0	5prime_fragment	FALSE	canonical	3	33	junction_3	9.57635978160108	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCCAAGTCTGACGAGAA	NA	False	NA	NA	False	TATAAA	-28	NA	95875612	95972373	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_95876085_95880868_95881294_95897848_95897972_95907077_95907272_95915667_95915830_95916226_95916435_95921174_95921316_95922304_95922419_95923259_95923380_95928078_95928151_95928718_95928865_95941453_95941550_95955913_95956014_95966561_95966715_95970575_95970657_95971932
transcript_196589.nic	chr9	+	3284	16	ISM	ENSG00000182150.19	ENST00000683350.1	4826	18	-71	8084	-43	236	5prime_fragment	FALSE	canonical	3	33	junction_3	9.57635978160108	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAATAATTTCAAAAAAGT	NA	False	NA	NA	False	AAGAAA	-37	NA	95875612	95972609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_95876085_95880868_95881294_95897848_95897972_95907077_95907272_95915667_95915830_95916226_95916435_95921174_95921316_95922304_95922419_95923259_95923380_95928078_95928151_95928718_95928865_95941453_95941550_95955913_95956014_95966561_95966715_95970575_95970657_95971932
transcript_196593.known	chr9	+	4564	14	FSM	ENSG00000182150.19	ENST00000288985.12	4564	14	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	10.2697349343253	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAGTCTGCATTCTATA	95872703	True	NA	NA	False	AATAAA	-18	NA	95875700	95968840	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_95876085_95880868_95881294_95897848_95897972_95907077_95907272_95915667_95915830_95916226_95916435_95921174_95921316_95922304_95922419_95923259_95923380_95928078_95928151_95928718_95928865_95941453_95941550_95955913_95956014_95966561
transcript_196596.known	chr9	+	2186	2	FSM	ENSG00000182150.19	ENST00000665077.3	2186	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCCAAATAATGCTACTGT	95872710	True	NA	NA	False	AAAAAG	-16	NA	95875707	95882677	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_95876085_95880868
transcript_196597.known	chr9	-	1623	12	FSM	ENSG00000130958.13	ENST00000253270.13	1623	12	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_6	11.1384970127248	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGCCTCATCATGTGAT	-96382381	True	NA	-10	True	AATAAA	-13	NA	96383711	96320709	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_96321342_96321997_96322081_96324090_96324170_96336716_96336785_96343903_96343997_96345298_96345402_96351102_96351172_96352037_96352110_96360153_96360222_96364463_96364551_96368271_96368306_96383476
transcript_1966.known	chr1	+	1338	8	NNC	ENSG00000187017.18	novel	1339	8	NA	NA	0	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	53.0767638156553	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCCGACTTACATATATTT	6446335	True	NA	21	True	NA	NA	NA	6448042	6460398	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_6448118_6448640_6448803_6448892_6449092_6451602_6451749_6451832_6452097_6457183_6457265_6457265_6457275_6459996
transcript_196605.known	chr9	-	886	6	FSM	ENSG00000130958.13	ENST00000375257.2	886	6	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	11.8995798245148	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCTGCTGATTTATTT	-96382348	True	NA	NA	False	NA	NA	NA	96383678	96350748	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_96351172_96352037_96352110_96360153_96360222_96364463_96364551_96368271_96368306_96383476
transcript_196606.known	chr9	-	3687	5	FSM	ENSG00000165244.7	ENST00000375256.5	3687	5	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_4	4.65698400254929	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAGTACACGGTCATTC	-96417243	True	NA	-8	True	AATAAA	-20	NA	96418370	96385940	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_96388460_96392397_96392537_96394822_96394943_96398163_96398315_96417612
transcript_196607.known	chr9	-	654	1	FSM	ENSG00000286835.1	ENST00000658405.1	654	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGTGTAATGAATGAAT	-96417285	False	1127	NA	False	AATAAA	-14	NA	96417377	96416723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_96416700_96417400
transcript_196608.known	chr9	-	2965	14	FSM	ENSG00000081377.17	ENST00000375242.7	2965	14	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_13	90.2880335043512	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATGG	NA	False	NA	NA	False	NA	NA	NA	96567254	96502611	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_96503790_96509672_96509790_96522505_96522604_96523260_96523421_96523586_96523726_96533926_96534158_96534454_96534543_96539077_96539141_96541825_96541893_96551795_96551873_96562692_96562786_96564776_96564853_96565392_96565484_96566767
transcript_196609.known	chr9	-	1734	14	FSM	ENSG00000081377.17	ENST00000463569.5	1734	14	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	83.3430211331317	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGAGAAGGGTCCAGCT	-96615706	False	NA	NA	False	AATGAA	-26	NA	96619400	96503564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_96503790_96515648_96515793_96522505_96522604_96523260_96523421_96523586_96523726_96533926_96534158_96534454_96534543_96539077_96539141_96541825_96541893_96551795_96551873_96562692_96562786_96564776_96564853_96565392_96565484_96619218
transcript_196610.known	chr9	-	2547	13	FSM	ENSG00000081377.17	ENST00000375240.7	2547	13	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	49.9263346230112	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAGAATATATAGTA	-96615684	False	NA	NA	False	NA	NA	NA	96619378	96502585	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_96503790_96522505_96522604_96523260_96523421_96523586_96523726_96533926_96534158_96534454_96534543_96539077_96539141_96541825_96541893_96551795_96551873_96562692_96562786_96564776_96564853_96565392_96565484_96619218
transcript_196612.known	chr9	+	2651	8	FSM	ENSG00000130956.14	ENST00000375249.5	2651	8	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_6	22.5352331848126	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTGTGTAGAGAAAACAGT	96448649	True	NA	4	True	AATAAA	-20	NA	96450168	96491336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_96450629_96458378_96458542_96465336_96465499_96465709_96465779_96471010_96471095_96484461_96484634_96488088_96488275_96489981
transcript_196615.known	chr9	-	2899	6	FSM	ENSG00000158122.12	ENST00000375234.8	2899	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	6.34350061086148	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTTTGTGCTTTTTTTAT	-96653829	True	NA	3	True	AATAAA	-21	NA	96655317	96639576	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_96641887_96645892_96646025_96651389_96651496_96651658_96651713_96654704_96654774_96655089
transcript_196623.known	chr9	-	6507	6	FSM	ENSG00000081386.13	ENST00000223428.9	6507	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	11.1247471881387	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATGTCTACACATTTAAT	-96777389	True	NA	3	True	AATAAA	-20	NA	96778087	96754552	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_96760478_96763117_96763214_96763505_96763633_96774787_96774847_96775999_96776246_96778033
transcript_196625.known	chr9	+	841	4	FSM	ENSG00000224848.3	ENST00000666834.2	897	4	54	2	17	0	multi-exon	FALSE	canonical	2	10	junction_1	3.85861230093008	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCAGTCTGTGGTTCTTT	96686721	True	NA	2	True	AATAAA	-14	NA	96687076	96773977	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_96687108_96687197_96687325_96720965_96721131_96773459
transcript_196627.known	chr9	+	774	3	FSM	ENSG00000224848.3	ENST00000656729.1	774	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCAGTCTGTGGTTCTTT	96686699	True	NA	2	True	AATAAA	-14	NA	96687054	96773977	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_96687146_96720965_96721131_96773459
transcript_196628.known	chr9	+	1299	3	FSM	ENSG00000224848.3	ENST00000661289.2	1301	3	2	0	2	0	multi-exon	FALSE	canonical	2	17	junction_2	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGAAAAACTGTATTAATAA	96686694	True	NA	NA	False	AATAAA	-2	NA	96687049	96774318	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_96687325_96720965_96721131_96773459
transcript_196629.known	chr9	+	766	2	FSM	ENSG00000224848.3	ENST00000653137.2	785	2	17	2	17	0	multi-exon	TRUE	canonical	1	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCAGTCTGTGGTTCTTT	96686721	True	NA	2	True	AATAAA	-14	NA	96687076	96773977	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_96687325_96773459
transcript_196630.known	chr9	-	4442	6	FSM	ENSG00000196597.13	ENST00000481138.6	4442	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	7.54718490564528	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGATACCACATTCCCT	NA	False	NA	NA	False	NA	NA	NA	96854514	96816268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_96819779_96827079_96827182_96844889_96845017_96851946_96852006_96852852_96853070_96854087
transcript_196633.known	chr9	-	932	5	FSM	ENSG00000196597.13	ENST00000478850.5	932	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	5.71729831301464	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACAATTCAGACTCTGGG	-96853465	True	NA	NA	False	AGTAAA	-43	NA	96854360	96819407	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_96819779_96827079_96827182_96844889_96845017_96851946_96852006_96854087
transcript_196634.known	chr9	-	628	4	FSM	ENSG00000196597.13	ENST00000466833.5	628	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	7.34846922834953	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACAATTCAGACTCTGGG	-96853288	False	NA	NA	False	AGTAAA	-43	NA	96854183	96819407	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_96819779_96827079_96827182_96851946_96852006_96854087
transcript_196642.nic	chr9	-	1898	6	ISM	ENSG00000196312.15	ENST00000645073.1	1246	8	-129	29979	-58	559	5prime_fragment	FALSE	canonical	3	47	junction_2	105.165393547497	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTAAGTATTGGGGCGGG	NA	False	NA	NA	False	AAAAAG	-16	NA	97013766	96932962	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_96933916_96942602_96942753_96949554_96949683_96958834_96958898_96972852_96972949_97013258
transcript_196651.nnic	chr9	-	976	5	NNC	ENSG00000196312.15	novel	1802	5	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	98.7835386084139	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGTCTATTCTAATGA	-97008146	True	NA	-1	True	AATAAA	-16	NA	97013705	96942912	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_96943155_96949554_96949683_96958834_96958898_96972852_96972949_97013258
transcript_196656.known	chr9	-	395	4	FSM	ENSG00000196312.15	ENST00000650909.1	395	4	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_3	52.6898683071254	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGACTTGGCCCTTCA	-97007807	False	NA	-105	True	NA	NA	NA	97013366	96949554	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_96949683_96958834_96958898_96972852_96972949_97013258
transcript_196657.known	chr9	-	1246	8	FSM	ENSG00000196312.15	ENST00000645073.1	1246	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	115.769122808797	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAGAAAAATTAGCC	-97008078	True	NA	NA	False	NA	NA	NA	97013637	96902983	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_96903109_96918642_96918827_96933794_96933916_96942602_96942753_96949554_96949683_96958834_96958898_96972852_96972949_97013258
transcript_196658.known	chr9	+	2675	7	FSM	ENSG00000188152.13	ENST00000372322.4	2675	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.74535599249993	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTCAGGGCTGCTGCCT	NA	False	NA	NA	False	AATAAA	-19	NA	96928842	96939416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_96929041_96931721_96932419_96935327_96935457_96936424_96936565_96937063_96937405_96937884_96938002_96938363
transcript_196659.known	chr9	-	4497	9	FSM	ENSG00000136943.12	ENST00000681927.1	4497	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	366.579779004516	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTCTTGTTCTGCAGTG	-97033143	True	NA	0	True	AGTAAA	-19	NA	97039142	97029676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_97033049_97034725_97034844_97035527_97035694_97036522_97036748_97037251_97037399_97037492_97037616_97037917_97038054_97038410_97038549_97039070
transcript_19666.nic	chr1	+	851	4	ISM	ENSG00000154305.18	ENST00000470521.1	4071	7	-28	18104	-26	-18104	5prime_fragment	FALSE	canonical	3	127	junction_1	3.29983164553722	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTAGACTTGAAAACC	222613578	True	NA	NA	False	TATAAA	-17	NA	222618070	222628031	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_222618244_222621158_222621293_222624767_222624855_222627574
transcript_196661.known	chr9	-	4481	8	FSM	ENSG00000136943.12	ENST00000680385.1	4481	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	304.589586700745	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTCTTGTTCTGCAGTG	-97033143	True	NA	0	True	AGTAAA	-19	NA	97039142	97029676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_97033049_97034725_97034844_97035527_97035694_97036400_97036748_97037251_97037399_97037492_97037616_97037917_97038054_97039070
transcript_196662.known	chr9	-	1512	8	FSM	ENSG00000136943.12	ENST00000681737.1	1512	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_7	290.418768719396	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGCCTTTTTTTAATGC	-97033141	True	NA	NA	False	AATAAA	-19	NA	97039140	97032654	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_97033049_97034725_97034844_97035527_97035694_97036522_97036748_97037251_97037399_97037492_97037616_97037917_97038054_97038937
transcript_196663.known	chr9	-	1372	8	FSM	ENSG00000136943.12	ENST00000680221.1	1372	8	0	0	0	0	multi-exon	TRUE	canonical	1	29	junction_4	297.075747916251	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGCCTTTTTTTAATGC	-97033140	True	NA	NA	False	AATAAA	-19	NA	97039139	97032654	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_97033049_97034725_97034844_97035527_97035694_97036522_97036742_97037251_97037399_97037492_97037616_97037917_97038054_97039070
transcript_196666.known	chr9	-	1715	7	FSM	ENSG00000136943.12	ENST00000680159.1	1715	7	0	0	0	0	multi-exon	FALSE	canonical	3	815	junction_1	49.8029450267083	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGCCTTTTTTTAATGC	-97033175	True	NA	NA	False	AATAAA	-19	NA	97039174	97032654	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_97033049_97034725_97034844_97035527_97035694_97036522_97036748_97037251_97037399_97037492_97038054_97039070
transcript_19667.nic	chr1	+	1276	4	ISM	ENSG00000154305.18	ENST00000470521.1	4071	7	-28	17679	-26	-17679	5prime_fragment	FALSE	canonical	3	127	junction_1	3.29983164553722	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGATGATGATGATGCATT	222613578	True	NA	NA	False	AAGAAA	-3	NA	222618070	222628456	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_222618244_222621158_222621293_222624767_222624855_222627574
transcript_196674.known	chr9	-	2478	6	FSM	ENSG00000136943.12	ENST00000680435.1	2478	6	0	0	0	0	multi-exon	FALSE	canonical	3	815	junction_1	54.5475938974397	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTTGAAATAAATTTTAAT	-97033140	True	NA	NA	False	AAAAAG	-12	NA	97039139	97032685	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_97033049_97034725_97034844_97035527_97036748_97037251_97037399_97037492_97038054_97039070
transcript_196675.nic	chr9	-	1154	5	ISM	ENSG00000136943.12	ENST00000259470.6	4359	8	-2	6397	-2	180	5prime_fragment	FALSE	canonical	3	825	junction_2	50.2145397270552	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTAGCCTTTGCACAGTT	-97033145	True	NA	NA	False	NA	NA	NA	97039144	97036073	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_97036748_97037251_97037399_97037492_97037616_97037917_97038054_97039070
transcript_19668.nic	chr1	+	1398	4	ISM	ENSG00000154305.18	ENST00000470521.1	4071	7	-28	17557	-26	-17557	5prime_fragment	FALSE	canonical	3	127	junction_1	3.29983164553722	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATGACAAAGAAGTAAACG	222613578	True	NA	NA	False	AAAACA	-3	NA	222618070	222628578	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_222618244_222621158_222621293_222624767_222624855_222627574
transcript_19670.nic	chr1	+	2363	4	ISM	ENSG00000154305.18	ENST00000470521.1	4071	7	-28	16592	-26	-16592	5prime_fragment	FALSE	canonical	3	127	junction_1	3.29983164553722	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGAAGAAAGCAAGCAAGAA	222613578	True	NA	NA	False	NA	NA	NA	222618070	222629543	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_222618244_222621158_222621293_222624767_222624855_222627574
transcript_19676.known	chr1	+	4104	13	FSM	ENSG00000162819.12	ENST00000340934.10	4104	13	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	17.6721689544763	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTGAGATCTTTTGTT	222712214	True	NA	17	True	AATAAA	-18	NA	222712563	222735187	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_222712943_222715683_222715801_222718924_222719032_222719262_222719360_222722418_222722515_222724091_222724165_222725449_222725556_222727167_222727258_222728742_222728829_222729619_222729702_222730026_222730178_222731356_222731517_222732627
transcript_196787.nnic	chr9	+	761	2	Genic_Genomic	ENSG00000289356.1	novel	96	1	NA	NA	-86	5049	multi-exon	FALSE	canonical	3	906	junction_1	0	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	31	True	AATAAA	-22	NA	97214747	97219978	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Genic_Genomic_chr9_+_97215114_97219583
transcript_196789.known	chr9	-	578	2	FSM	ENSG00000203279.5	ENST00000366109.2	578	2	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGCTACTTCGAGCTCCG	-97236947	True	NA	NA	False	AATAAA	-28	NA	97238678	97237763	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_97238086_97238422
transcript_19679.known	chr1	-	2975	10	FSM	ENSG00000186063.13	ENST00000340020.11	2975	10	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_5	22.4669853807485	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGTGTGATTAACTTAAC	-222706844	True	NA	-7	True	ATTAAA	-16	NA	222712491	222668012	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_222669990_222670132_222670251_222673312_222673436_222676095_222676219_222686929_222687037_222687594_222687659_222693788_222693844_222694209_222694264_222703147_222703218_222712207
transcript_196790.known	chr9	+	3688	17	FSM	ENSG00000196116.8	ENST00000355295.5	3688	17	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_8	4.06538359198735	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGACTACCTTTTAATTTC	97411791	True	NA	NA	False	AATAAA	-20	NA	97412095	97496125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_97412239_97428459_97428673_97430932_97431075_97432024_97432239_97439244_97439319_97441657_97441876_97460177_97460765_97464841_97465029_97470557_97470670_97472292_97472496_97473491_97473627_97475382_97475470_97478438_97478574_97480827_97480939_97482848_97483352_97487171_97487333_97495662
transcript_196792.known	chr9	+	3311	10	FSM	ENSG00000136842.14	ENST00000259365.9	3311	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	2.72618758808562	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATATGGGTTTGAACTGCA	97501606	True	NA	NA	False	AATAAA	-21	NA	97501665	97601743	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_97501804_97524140_97524309_97546184_97546342_97553280_97553401_97562731_97562822_97564037_97564169_97565847_97565956_97568893_97569038_97591290_97591436_97599633
transcript_196798.known	chr9	-	4116	10	FSM	ENSG00000136925.15	ENST00000341170.5	4116	10	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_8	9.42547113797711	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGAAGAGTGTGCCGTTT	-97631227	True	NA	-4	True	AATAAA	-25	NA	97633368	97600079	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_97602768_97604726_97604866_97605482_97605642_97606142_97606262_97610345_97610452_97611573_97611700_97617756_97617878_97625680_97625998_97627397_97627613_97633242
transcript_1968.nic	chr1	+	2280	8	NIC	ENSG00000187017.18	novel	1339	8	NA	NA	195	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	43.842016935579	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCGACTTACATATATTTG	6447480	False	NA	22	True	NA	NA	NA	6447545	6460399	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_6448562_6448640_6448803_6448892_6449092_6451602_6451749_6451832_6452097_6457183_6457264_6457360_6457373_6459998
transcript_196810.known	chr9	+	4983	23	FSM	ENSG00000136937.13	ENST00000375147.8	4983	23	0	0	0	0	multi-exon	TRUE	canonical	3	359	junction_4	44.5683614571504	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACTGTTTTCCTAATTTA	97633075	True	NA	5	True	AGTAAA	-1	NA	97633820	97673748	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_97633916_97640793_97640883_97641561_97641663_97643203_97643361_97645116_97645225_97645610_97645733_97647491_97647562_97648007_97648224_97650502_97650601_97651309_97651374_97653797_97653909_97654879_97654945_97655701_97655765_97656010_97656086_97658639_97658744_97660945_97661069_97662041_97662145_97662953_97663048_97664339_97664444_97666762_97666878_97668845_97668975_97669592_97669707_97671085
transcript_196819.known	chr9	-	1400	6	FSM	ENSG00000136936.11	ENST00000375128.5	1400	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	7.44580418759451	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTTTCTGTACTCTTG	-97696303	True	NA	1	True	AATAAA	-22	NA	97697340	97674908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_97675588_97684922_97685041_97687095_97687262_97689533_97689640_97693648_97693760_97697120
transcript_196820.nic	chr9	-	751	5	ISM	ENSG00000136936.11	ENST00000375128.5	1400	6	-68	10052	-68	0	5prime_fragment	FALSE	canonical	3	46	junction_1	8.28779222712539	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATGAAACAGAAGAAAT	-97696371	True	NA	NA	False	NA	NA	NA	97697408	97684960	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_97685041_97687095_97687262_97689533_97689640_97693648_97693760_97697120
transcript_196822.known	chr9	-	1577	5	FSM	ENSG00000136932.15	ENST00000375119.8	1577	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	9.12071817347735	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTCTCGATAATTTCTG	-97921979	True	NA	42	True	ATTAAA	-15	NA	97922500	97904488	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_97904993_97909959_97910617_97913400_97913559_97916163_97916339_97922417
transcript_196824.known	chr9	+	1483	7	FSM	ENSG00000136938.9	ENST00000339399.5	1483	7	0	0	0	0	multi-exon	FALSE	canonical	3	840	junction_1	54.0986752764489	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGTTGTATGCTTACAT	97970670	True	NA	12	True	AATAAA	-19	NA	97983340	98015943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_97983610_97994630_97994781_97998555_97998679_98004963_98005154_98011270_98011390_98012420_98012473_98015363
transcript_196833.known	chr9	-	1479	7	FSM	ENSG00000106785.15	ENST00000342043.3	1479	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	32.6568862909834	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATGGTCTTCACTGGGA	-98115650	True	NA	-2	True	AATAAA	-21	NA	98119198	98084354	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_98084467_98087441_98088006_98091908_98092002_98094866_98095030_98099930_98100165_98109888_98109985_98118981
transcript_196836.known	chr9	+	1179	6	FSM	ENSG00000095380.11	ENST00000210444.6	1179	6	0	0	0	0	multi-exon	FALSE	canonical	3	692	junction_3	93.4931013497788	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCAGTTCCCTTGCTGAT	98045754	True	NA	20	True	AATAAA	-16	NA	98056731	98083077	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_98056941_98060781_98060998_98076917_98077018_98078192_98078348_98080815_98081083_98082845
transcript_196838.known	chr9	-	4480	6	FSM	ENSG00000106785.15	ENST00000341469.7	4480	6	0	0	0	0	multi-exon	FALSE	canonical	1	34	junction_4	20.5075595817737	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGTCTTCACTGGGAGT	-98115674	True	NA	0	True	AATAAA	-23	NA	98119222	98084352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_98088006_98091908_98092002_98094866_98095030_98099930_98100165_98109888_98109985_98118981
transcript_196842.nnic	chr9	+	956	4	NIC	ENSG00000095380.11	novel	1179	6	NA	NA	-32	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_2	428.621822434027	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCAGTTCCCTTGCTGAT	98045722	True	NA	20	True	AATAAA	-16	NA	98056699	98083077	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_98056941_98060781_98060998_98080815_98081083_98082845
transcript_196850.known	chr9	-	5456	12	FSM	ENSG00000106789.13	ENST00000375077.5	5456	12	0	0	0	0	multi-exon	TRUE	canonical	3	326	junction_1	35.4922876036308	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCTTTCCTTTTCTTGAT	-98189409	True	NA	-4	True	AATAAA	-22	NA	98192637	98120974	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_98124906_98126548_98126824_98128169_98128261_98128606_98128720_98129793_98129891_98130954_98131060_98132184_98132302_98133037_98133218_98134805_98134956_98137571_98137689_98157459_98157661_98192558
transcript_196859.nnic	chr9	-	2512	12	NNC	ENSG00000106789.13	novel	5456	12	NA	NA	-182	-3032	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	105.351438622521	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCCTGGCCAACATGGTG	-98192798	False	NA	NA	False	AAAAAG	-8	NA	98192819	98124006	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_98124906_98126642_98126824_98128169_98128261_98128606_98128720_98129793_98129891_98130954_98131060_98132184_98132302_98133037_98133218_98134805_98134956_98137571_98137689_98157459_98157661_98192558
transcript_196893.known	chr9	-	3198	13	FSM	ENSG00000095383.20	ENST00000375066.6	3198	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	13.0221499334361	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGCTTTGGAACTTAAACA	-98253972	True	NA	-16	True	TATAAA	-27	NA	98255633	98199028	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_98199589_98200252_98200342_98201478_98201665_98203287_98203409_98208667_98209145_98210655_98210844_98213107_98213219_98220832_98221229_98228951_98229149_98233415_98233550_98243993_98244130_98251784_98251927_98255172
transcript_196896.known	chr9	-	3174	13	FSM	ENSG00000095383.20	ENST00000375064.5	3174	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	13.0072095393286	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGCTTTGGAACTTAAACA	-98253919	True	NA	-16	True	TATAAA	-27	NA	98255580	98199028	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_98199585_98200252_98200375_98201478_98201665_98203287_98203409_98208667_98209145_98210655_98210844_98213107_98213219_98220832_98221229_98228951_98229149_98233415_98233550_98243993_98244130_98251784_98251927_98255172
transcript_196900.known	chr9	-	3046	12	FSM	ENSG00000095383.20	ENST00000342112.9	3046	12	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_11	12.0364460310281	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGCTTTGGAACTTAAACA	-98253929	True	NA	-16	True	TATAAA	-27	NA	98255590	98199028	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_98199589_98200252_98200375_98201478_98201665_98203287_98203409_98208667_98209145_98210655_98210844_98213107_98213219_98220832_98221229_98228951_98229149_98233415_98233550_98243993_98244130_98255172
transcript_196917.nnic	chr9	-	2492	3	NNC	ENSG00000095383.20	novel	3265	13	NA	NA	-81	-39142	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTCAGAGTCTGGCTTA	-98254069	True	NA	NA	False	AATAAA	-21	NA	98255730	98247816	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_98249609_98251784_98251927_98255172
transcript_196920.nic	chr9	-	3057	16	NIC	ENSG00000165138.18	novel	7190	15	NA	NA	140	0	combination_of_known_junctions	FALSE	canonical	3	122	junction_1	127.490897278546	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACTGGCTTGCAGAAGGA	-98796389	False	3981	-7	True	AATAAA	-19	NA	98796399	98732012	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_98732554_98736526_98736624_98745558_98745676_98751028_98751097_98756419_98756604_98768080_98768251_98770895_98771047_98773876_98774081_98777404_98777455_98778225_98778425_98780188_98780338_98782466_98782574_98783952_98784158_98784831_98784877_98790103_98790607_98796132
transcript_196926.known	chr9	-	1938	2	FSM	ENSG00000285706.1	ENST00000647710.1	1938	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATCATGGTGAATTGACT	-98807512	True	NA	NA	False	AATAAA	-7	NA	98807564	98798465	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_98799610_98806770
transcript_196927.known	chr9	+	6492	9	FSM	ENSG00000106799.13	ENST00000374994.9	6492	9	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_7	27.4533695563951	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAAGACAATTTGTTGCC	99097973	True	NA	118	True	ATTAAA	-17	NA	99105112	99154192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_99105303_99128854_99129101_99132508_99132740_99137858_99138090_99142535_99142704_99144731_99144889_99146484_99146610_99147653_99147785_99149179
transcript_196929.known	chr9	+	5720	8	FSM	ENSG00000106799.13	ENST00000374990.6	5720	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	124.098709888211	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCAGTGGCATATTTTAA	99097971	True	NA	-12	True	AATAAA	-16	NA	99105110	99153649	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_99105303_99128854_99129101_99137858_99138090_99142535_99142704_99144731_99144889_99146484_99146610_99147653_99147785_99149179
transcript_196930.known	chr9	+	5933	9	FSM	ENSG00000106799.13	ENST00000552516.5	5933	9	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	121.715279956955	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATATTTTAAAATAAAGTG	99098010	True	NA	-3	True	AATAAA	-25	NA	99105149	99153658	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_99105303_99128854_99129101_99132496_99132740_99137858_99138090_99142535_99142704_99144731_99144889_99146484_99146610_99147653_99147785_99149179
transcript_196931.known	chr9	-	2966	3	FSM	ENSG00000119523.10	ENST00000238477.5	2966	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	0.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTTTGGCATTGTGAA	-99217182	True	NA	0	True	ATTAAA	-17	NA	99221942	99216425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_99218837_99220978_99221138_99221546
transcript_196932.known	chr9	-	2808	2	FSM	ENSG00000119523.10	ENST00000476832.2	2808	2	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	0	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTTGGCATTGTGAAA	-99217182	True	NA	1	True	ATTAAA	-18	NA	99221942	99216424	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_99218837_99221546
transcript_196935.known	chr9	+	587	4	FSM	ENSG00000106803.10	ENST00000498603.5	587	4	0	0	0	0	multi-exon	FALSE	canonical	2	27	junction_1	1534.41114293254	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTCTGATCGTTGATGC	99222031	False	NA	21	True	AATAAA	-19	NA	99222063	99230615	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_99222172_99222545_99222644_99227898_99228001_99230336
transcript_196936.known	chr9	+	564	4	FSM	ENSG00000106803.10	ENST00000223641.5	564	4	0	0	0	0	multi-exon	FALSE	canonical	3	3157	junction_2	98.6204846875131	1101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTCTGATCGTTGATGC	99181611	True	NA	21	True	AATAAA	-19	NA	99222281	99230615	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_99222367_99222545_99222644_99227898_99228001_99230336
transcript_196937.known	chr9	+	687	2	FSM	ENSG00000106803.10	ENST00000481573.1	687	2	0	0	0	0	multi-exon	FALSE	canonical	3	3235	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAAGCTCTTTCCTTTTCCC	99181644	True	NA	NA	False	TTTAAA	-21	NA	99222314	99223180	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_99222367_99222545
transcript_196938.known	chr9	-	1652	3	FSM	ENSG00000255145.3	ENST00000529965.3	1652	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	7	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTGCCCAGGTTGGAGT	-99906299	True	NA	NA	False	NA	NA	NA	99906601	99885217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_99886696_99894879_99895006_99906553
transcript_19694.known	chr1	+	3670	12	FSM	ENSG00000162819.12	ENST00000537020.5	3670	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	31.9149178828816	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTTTGTTTTTCGACAA	222712003	False	NA	26	True	AATAAA	-27	NA	222713320	222735196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_222713417_222715683_222715801_222718924_222719032_222719262_222719360_222722418_222722515_222724091_222724165_222725449_222725556_222727167_222727258_222728742_222728829_222729619_222729702_222730026_222730178_222732627
transcript_196941.known	chr9	+	6885	8	FSM	ENSG00000136874.11	ENST00000259400.11	6885	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	10.842094834863	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTAACTGAAGGCCTGTG	99905529	True	NA	5	True	AATAAA	-18	NA	99906653	99974534	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_99906707_99915177_99915363_99928777_99928844_99951059_99951286_99959916_99960033_99960104_99960156_99967652_99967740_99968433
transcript_196945.known	chr9	-	4808	12	FSM	ENSG00000023318.9	ENST00000262455.7	4808	12	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_3	36.643468744824	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAGTAAAAAAAAAAAA	-100090501	True	NA	NA	False	AATAAA	-21	NA	100099000	99979184	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_99982714_99984966_99985070_100006505_100006648_100007577_100007690_100016321_100016439_100018255_100018314_100020615_100020732_100022041_100022227_100052416_100052533_100057819_100057860_100060099_100060173_100098783
transcript_196949.known	chr9	+	2968	18	FSM	ENSG00000119509.13	ENST00000262456.6	2968	18	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	12.7691778558444	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATTCACCTAAAAATGTG	100098072	True	NA	NA	False	NA	NA	NA	100099274	100300788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_100099417_100104497_100104628_100126382_100126550_100226061_100226236_100229659_100229828_100240059_100240241_100242569_100242680_100246615_100246788_100252282_100252439_100252906_100253137_100264821_100264929_100272863_100273077_100284319_100284604_100292325_100292437_100292946_100293044_100296916_100297147_100297935_100298011_100300567
transcript_196952.known	chr9	+	4897	17	FSM	ENSG00000119509.13	ENST00000262457.7	4897	17	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_3	12.9252659547106	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACTATGGCCTCTTCAAT	100098040	True	NA	NA	False	AATAAA	-16	NA	100099242	100302175	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_100099417_100104497_100104628_100126382_100126550_100226061_100226236_100229659_100229828_100240059_100240241_100242569_100242680_100246615_100246788_100252282_100252439_100252906_100253137_100264821_100264929_100272863_100273077_100284319_100284604_100292325_100293044_100296916_100297147_100297935_100298011_100300567
transcript_196955.known	chr9	+	1654	4	FSM	ENSG00000119509.13	ENST00000374921.3	1654	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	14.2361043360417	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATAAGTGTTTTATAAAA	100098085	True	NA	NA	False	ATTAAA	-33	NA	100099287	100130903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_100099417_100104497_100104628_100126382_100126550_100129675
transcript_196961.nnic	chr9	-	2822	16	NNC	ENSG00000136891.14	novel	3077	15	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_13	161.561326505517	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTACGAACCTTCTTTC	-100339247	True	NA	-16	True	ATTAAA	-16	NA	100352977	100302085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_100302305_100303631_100303843_100308499_100308682_100310298_100310380_100320264_100320399_100321682_100321772_100326301_100326480_100327786_100327963_100329139_100329276_100329930_100330170_100340256_100340370_100346071_100346316_100346693_100346879_100347166_100347407_100349183_100349373_100352771
transcript_196966.known	chr9	-	3077	15	FSM	ENSG00000136891.14	ENST00000374902.9	3077	15	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_12	52.3988335280666	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACGAACCTTCTTTCTT	-100339212	True	NA	-14	True	ATTAAA	-18	NA	100352942	100302083	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_100302305_100303631_100303843_100308499_100308682_100310298_100310380_100320264_100320399_100321682_100321772_100326301_100326480_100327786_100327963_100329139_100329276_100329930_100330170_100340256_100340370_100346071_100346316_100346693_100347407_100349183_100349373_100352771
transcript_19698.known	chr1	+	782	2	FSM	ENSG00000162819.12	ENST00000496267.1	782	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAATGTAGGCATTTCATA	222712209	True	NA	97	True	AATAAA	-17	NA	222712558	222713985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_222712943_222713587
transcript_196983.nnic	chr9	-	2735	13	NIC	ENSG00000136891.14	novel	3077	15	NA	NA	-35	0	combination_of_known_splicesites	FALSE	canonical	3	34	junction_8	185.209097298762	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTACGAACCTTCTTTC	-100339247	True	NA	-16	True	ATTAAA	-16	NA	100352977	100302085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_100302305_100303631_100303843_100308499_100308682_100310298_100310380_100320264_100320399_100321682_100321772_100326301_100326480_100327786_100327963_100340256_100340370_100346071_100346316_100346693_100347407_100349183_100349373_100352771
transcript_196986.nic	chr9	-	1973	8	ISM	ENSG00000136891.14	ENST00000374902.9	3077	15	-35	25746	-35	1356	5prime_fragment	FALSE	canonical	3	577	junction_5	66.3103402531596	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTACTAAAAAGTTTACA	-100339247	True	NA	NA	False	AATAAA	-1	NA	100352977	100327829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_100327963_100329139_100329276_100329930_100330170_100340256_100340370_100346071_100346316_100346693_100347407_100349183_100349373_100352771
transcript_196989.nic	chr9	-	1431	5	ISM	ENSG00000136891.14	ENST00000374902.9	3077	15	-35	38207	-35	-11105	5prime_fragment	FALSE	canonical	3	577	junction_2	84.1171058703282	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAACCAAGCACAAAAGGAAA	-100339247	True	NA	NA	False	AAGAAA	-1	NA	100352977	100340290	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_100340370_100346071_100346316_100346693_100347407_100349183_100349373_100352771
transcript_19699.nic	chr1	-	461	2	ISM	ENSG00000186063.13	ENST00000355727.3	1072	8	-171	33542	-108	-29775	5prime_fragment	FALSE	canonical	3	397	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTACCATAAAATAATCTCT	-222712579	False	NA	NA	False	NA	NA	NA	222712599	222703148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_222703218_222712207
transcript_197.known	SIRV5	+	526	3	FSM	SIRV5A	SIRV503	526	3	0	0	0	0	multi-exon	FALSE	canonical	3	1710	junction_2	5951.5	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTCGCTTGCCCAATTG	NA	False	NA	NA	False	NA	NA	NA	8201	11142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV5_+_8586_10858_10992_11133
transcript_19700.known	chr1	+	709	8	FSM	ENSG00000162819.12	ENST00000426638.1	709	8	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	24.6808196205648	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGCCAATTTCTATCAAAA	222712051	False	NA	NA	False	ACTAAA	-38	NA	222713368	222727232	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_222713417_222715683_222715801_222718924_222719032_222719262_222719360_222722418_222722515_222724091_222724165_222725449_222725556_222727167
transcript_197002.known	chr9	+	1880	3	FSM	ENSG00000066697.15	ENST00000395067.7	1880	3	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	30	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATAGTCACACTGTGTA	NA	False	NA	NA	False	ATTAAA	-21	NA	100427142	100451734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_100427394_100441905_100442357_100450556
transcript_197004.known	chr9	+	710	3	FSM	ENSG00000066697.15	ENST00000374886.7	710	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	119.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTACAGGAGCAAAACCTC	100427138	False	NA	NA	False	AATAAA	-1	NA	100427436	100450681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_100427571_100441905_100442357_100450556
transcript_197009.known	chr9	+	2575	10	FSM	ENSG00000241697.5	ENST00000374879.5	2575	10	0	0	0	0	multi-exon	FALSE	canonical	3	686	junction_9	38.2499899136596	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTCTGTTTTGGTGTGT	100468916	True	NA	23	True	AATATA	-15	NA	100473148	100577636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_100473741_100498764_100498875_100509004_100509135_100513306_100513334_100516674_100516772_100547743_100547893_100550094_100550161_100561396_100561521_100572517_100572677_100576515
transcript_197012.known	chr9	+	2477	8	FSM	ENSG00000148123.15	ENST00000374874.8	2477	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.10365156891435	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGCTCATGTCTTTTGT	NA	False	NA	17	True	AAAAAG	-16	NA	101028726	101325135	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_101029103_101185449_101185558_101269879_101270069_101286103_101286237_101309210_101309462_101312797_101312975_101317364_101317497_101324024
transcript_197013.known	chr9	-	3336	2	FSM	ENSG00000136897.8	ENST00000374865.5	3336	2	0	0	0	0	multi-exon	FALSE	canonical	3	1170	junction_1	0	385	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACGTGTCATTTTTCTGA	-101388607	True	NA	-10	True	AATAAA	-16	NA	101398618	101387632	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_101390851_101398500
transcript_197015.known	chr9	+	3115	4	FSM	ENSG00000136870.11	ENST00000259395.4	3115	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	7.40870359029762	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGAGTTGTTACTTTAG	101398353	False	NA	22	True	ATTAAA	-23	NA	101399027	101410660	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_101399190_101399394_101399531_101399925_101400011_101407928
transcript_197016.known	chr9	+	3134	3	FSM	ENSG00000136870.11	ENST00000374861.7	3134	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGAGTTGTTACTTTAG	101398198	True	NA	22	True	ATTAAA	-23	NA	101398872	101410660	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_101399190_101399925_101400011_101407928
transcript_197020.known	chr9	-	4225	2	FSM	ENSG00000165152.9	ENST00000374848.8	4225	2	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	0	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGAGAAGACTTTTATC	-101484301	True	NA	-17	True	AATAAA	-21	NA	101487173	101473169	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_101477170_101486948
transcript_197022.known	chr9	+	3938	20	FSM	ENSG00000155827.12	ENST00000389120.8	3938	20	0	0	0	0	multi-exon	FALSE	canonical	1	48	junction_4	41.3653407183161	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTATGGTTTTTCT	101529298	True	NA	28	True	ATTAAA	-18	NA	101533852	101563344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_101533915_101535397_101535553_101540202_101540371_101540489_101540638_101540792_101540976_101544766_101544886_101546819_101546967_101547136_101547215_101547398_101547519_101550605_101550786_101551683_101551820_101552140_101552263_101552382_101552754_101553987_101554106_101554693_101554844_101557383_101557597_101560800_101560927_101561089_101561231_101561909_101562012_101562245
transcript_197024.nic	chr9	+	2166	15	ISM	ENSG00000155827.12	ENST00000389120.8	3938	20	5	8587	5	-6695	5prime_fragment	FALSE	canonical	1	48	junction_4	41.5081132959299	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGATGAGGATGCCTTG	101529303	True	NA	NA	False	GATAAA	-23	NA	101533857	101554757	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_101533915_101535397_101535553_101540202_101540371_101540489_101540638_101540792_101540976_101544766_101544886_101546819_101546967_101547136_101547215_101547398_101547519_101550605_101550786_101551683_101551820_101552140_101552263_101552382_101552754_101553987_101554106_101554693
transcript_197025.nic	chr9	+	1924	13	ISM	ENSG00000155827.12	ENST00000389120.8	3938	20	-92	10748	-92	-8856	5prime_fragment	FALSE	canonical	1	48	junction_4	41.2872727228245	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAACGGGAGAAGGAGAAG	NA	False	NA	7	True	NA	NA	NA	101533760	101552596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_101533915_101535397_101535553_101540202_101540371_101540489_101540638_101540792_101540976_101544766_101544886_101546819_101546967_101547136_101547215_101547398_101547519_101550605_101550786_101551683_101551820_101552140_101552263_101552382
transcript_197026.nic	chr9	+	1950	13	ISM	ENSG00000155827.12	ENST00000389120.8	3938	20	0	10630	0	-8738	5prime_fragment	FALSE	canonical	1	48	junction_4	41.2872727228245	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGCAGAAATTATCAAAC	101529298	True	NA	NA	False	GATAAA	-33	NA	101533852	101552714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_101533915_101535397_101535553_101540202_101540371_101540489_101540638_101540792_101540976_101544766_101544886_101546819_101546967_101547136_101547215_101547398_101547519_101550605_101550786_101551683_101551820_101552140_101552263_101552382
transcript_197032.known	chr9	+	596	5	FSM	ENSG00000155827.12	ENST00000374819.6	596	5	0	0	0	0	multi-exon	FALSE	canonical	1	48	junction_4	62.2389548434098	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCGAGCCGTGTCCCAGAT	101529333	True	NA	NA	False	NA	NA	NA	101533887	101540890	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_101533915_101535397_101535553_101540202_101540371_101540489_101540638_101540792
transcript_197033.known	chr9	+	5928	25	FSM	ENSG00000136824.19	ENST00000374793.8	5928	25	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	44.3886716028613	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTATGAGCAGTATGTAC	104090575	True	NA	9	True	AATAAA	-14	NA	104094308	104141419	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_104094478_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959_104102194_104102423_104102574_104111580_104111815_104113315_104113476_104113963_104114082_104114690_104114830_104116199_104116320_104118170_104118376_104120026_104120163_104123107_104123233_104124911_104125106_104126640_104126785_104127285_104127481_104129644_104129846_104132008_104132126_104134414_104134576_104138017_104138166_104139138
transcript_197036.nic	chr9	+	2571	18	ISM	ENSG00000136824.19	ENST00000374793.8	5928	25	-48	16472	1	-14704	5prime_fragment	FALSE	canonical	3	97	junction_1	37.2460257743851	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCCAAAGAAAAGCAGAAGAA	104094233	True	NA	NA	False	ACTAAA	-5	NA	104094260	104124947	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_104094478_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959_104102194_104102423_104102574_104111580_104111815_104113315_104113476_104113963_104114082_104114690_104114830_104116199_104116320_104118170_104118376_104120026_104120163_104123107_104123233_104124911
transcript_197037.nic	chr9	+	2623	18	ISM	ENSG00000136824.19	ENST00000374793.8	5928	25	-48	16420	1	-14652	5prime_fragment	FALSE	canonical	3	97	junction_1	37.2460257743851	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAGAAGCTGAAAGAGAGC	104094233	True	NA	-80	True	AATAAA	-9	NA	104094260	104124999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_104094478_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959_104102194_104102423_104102574_104111580_104111815_104113315_104113476_104113963_104114082_104114690_104114830_104116199_104116320_104118170_104118376_104120026_104120163_104123107_104123233_104124911
transcript_197056.nic	chr9	+	1678	11	ISM	ENSG00000136824.19	ENST00000374793.8	5928	25	-48	27958	1	11268	5prime_fragment	FALSE	canonical	3	97	junction_1	43.71098260163	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAAATTATGAAGGTTTGC	104094233	True	NA	1	True	AAAAAG	-34	NA	104094260	104113461	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_104094478_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959_104102194_104102423_104102574_104111580_104111815_104113315
transcript_197059.nic	chr9	+	1298	9	ISM	ENSG00000136824.19	ENST00000374793.8	5928	25	-48	38846	1	380	5prime_fragment	FALSE	canonical	3	97	junction_1	48.8697247792537	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGAGCTTAATGTGCC	104094233	True	NA	NA	False	NA	NA	NA	104094260	104102573	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_104094478_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959_104102194_104102423
transcript_197061.nic	chr9	+	1148	8	ISM	ENSG00000136824.19	ENST00000374793.8	5928	25	-48	39226	1	0	5prime_fragment	FALSE	canonical	3	97	junction_1	52.0713795806158	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTGAACATATGTATAAGA	104094233	True	NA	NA	False	AATAGA	-26	NA	104094260	104102193	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_104094478_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959
transcript_197063.nnic	chr9	+	1087	8	NIC	ENSG00000136824.19	novel	5928	25	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	52	junction_1	67.6711737381733	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTGAACATATGTATAAGA	104090559	True	NA	NA	False	AATAGA	-26	NA	104094292	104102193	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_104094449_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959
transcript_197067.nic	chr9	+	905	7	ISM	ENSG00000136824.19	ENST00000374793.8	5928	25	-48	40995	1	-1769	5prime_fragment	FALSE	canonical	3	97	junction_1	54.3284762655215	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAGAGGTATATTCTGT	104094233	True	NA	NA	False	NA	NA	NA	104094260	104100424	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_104094478_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388
transcript_197079.known	chr9	+	4266	25	FSM	ENSG00000136824.19	ENST00000374787.7	4266	25	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_1	53.3648344469985	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGATCATCAGTGTTTAA	104093810	True	NA	9	True	ATTAAA	-16	NA	104094563	104139651	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_104094839_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959_104102194_104102423_104102574_104111580_104111815_104113315_104113476_104113963_104114082_104114690_104114830_104116199_104116320_104118170_104118376_104120026_104120163_104123107_104123233_104124911_104125106_104126640_104126785_104127285_104127481_104129644_104129846_104132008_104132126_104134414_104134576_104138017_104138166_104139138
transcript_197081.known	chr9	+	1636	6	FSM	ENSG00000136783.10	ENST00000374767.5	1636	6	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_5	14.7512711316686	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGTTCTTTTTGTTGA	104746608	True	NA	5	True	AATAAA	-14	NA	104747682	104760120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_104747853_104750955_104751167_104752905_104753065_104754550_104754701_104759084_104759172_104759261
transcript_197084.nic	chr9	+	1743	5	ISM	ENSG00000136783.10	ENST00000374767.5	1636	6	-15	-2	-15	2	intron_retention	FALSE	canonical	3	99	junction_3	11.5839328382031	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTCTTTTTGTTGAGT	104746593	True	NA	7	True	AATAAA	-16	NA	104747667	104760122	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_104747853_104750955_104751167_104752905_104753065_104754550_104754701_104759084
transcript_197091.known	chr9	+	10433	17	FSM	ENSG00000070214.16	ENST00000470972.5	10433	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_16	90.7833745448471	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTATTGTCTACTGTGTTG	105238637	True	NA	7	True	AATAAA	-21	NA	105244621	105397346	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_105244905_105299219_105299310_105309723_105309867_105335562_105335700_105348357_105348452_105356211_105356382_105358343_105358434_105361190_105361331_105362820_105363008_105364554_105364721_105365482_105365640_105366345_105366430_105374597_105374736_105383122_105383360_105385421_105385503_105389032_105389109_105389186
transcript_197100.known	chr9	+	10482	16	FSM	ENSG00000070214.16	ENST00000374720.8	10482	16	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_2	24.3261176516106	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTATTGTCTACTGTGTTG	105238666	True	NA	7	True	AATAAA	-21	NA	105244650	105397346	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_105244905_105299219_105299310_105309723_105309867_105335562_105335700_105348357_105348452_105356211_105356382_105358343_105358434_105361190_105361331_105362820_105363008_105364554_105364721_105365482_105365640_105366345_105366430_105374597_105374736_105383122_105383360_105385421_105385503_105389032
transcript_197103.known	chr9	+	9640	16	FSM	ENSG00000070214.16	ENST00000374723.5	9640	16	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_15	90.5300441228705	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTATTGTCTACTGTGTTG	105238637	True	NA	7	True	AATAAA	-21	NA	105244621	105397346	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_105244905_105299219_105299310_105309723_105309867_105335562_105335700_105348357_105348452_105356211_105356382_105358343_105358434_105361190_105361331_105362820_105363008_105364554_105364721_105365482_105365640_105366345_105366430_105374597_105374736_105383122_105383360_105385421_105385503_105389903
transcript_197104.known	chr9	+	3088	16	FSM	ENSG00000070214.16	ENST00000374724.1	3088	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	93.6581490789183	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTATGGCTGCTTCTGCC	105238637	True	NA	NA	False	AATAAA	-36	NA	105244621	105439171	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_105244905_105299219_105299310_105309723_105309867_105335562_105335700_105348357_105348452_105356211_105356382_105358343_105358434_105361190_105361331_105362820_105363008_105364554_105364721_105365482_105365640_105366345_105366430_105374597_105374736_105383122_105383360_105385421_105385503_105438280
transcript_197124.known	chr9	+	1836	4	FSM	ENSG00000106701.13	ENST00000469022.5	1836	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGCACTATATCACTT	105447449	True	NA	NA	False	AAAACA	-6	NA	105448044	105473320	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_105448236_105464235_105464332_105468192_105468325_105471903
transcript_197126.known	chr9	+	7455	11	FSM	ENSG00000106692.15	ENST00000357998.10	7455	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	10.677546534668	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATCTTGTATTTATTTTT	105556704	True	NA	4	True	AATAAA	-19	NA	105558130	105641118	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_105558166_105573654_105573747_105574944_105575138_105596597_105596658_105601144_105601349_105604214_105604493_105607818_105607952_105615277_105615408_105617958_105618093_105619933_105620062_105635050
transcript_197128.known	chr9	+	3545	6	FSM	ENSG00000095209.12	ENST00000374692.8	3545	6	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_5	31.230754073509	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCTTGGTAATATTCATT	105691325	True	NA	NA	False	AATAAA	-34	NA	105694540	105776629	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_105694773_105705596_105705754_105721536_105721722_105722533_105722622_105748072_105748191_105773864
transcript_197137.known	chr9	+	10345	13	FSM	ENSG00000148143.13	ENST00000277225.10	10345	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	7.40635987963498	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGTGCATCTGTTGTAA	106862014	True	NA	9	True	AATAAA	-19	NA	106863165	107013634	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_106863356_106923353_106923604_106924132_106929760_106930524_106930690_106932445_106932550_106935502_106935622_106938915_106939108_106972004_106972273_106974136_106974274_106984185_106984410_107003293_107003427_107009544_107009669_107010822
transcript_19714.known	chr1	+	4691	8	FSM	ENSG00000154309.9	ENST00000675039.1	4691	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.1215259448868	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAAATGCAGCATTCAAT	222813390	True	NA	-9	True	AATAAA	-8	NA	222815069	223005969	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_222815172_222942806_222943333_222983079_222983110_222990624_222990749_222991519_222991648_222992012_222992111_222994884_222994983_223002384
transcript_197144.known	chr9	+	4114	10	FSM	ENSG00000119318.13	ENST00000358015.8	4114	10	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	12.0287720913105	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAACATTGCACTTCTCAT	107249376	True	NA	12	True	TATAAA	-15	NA	107283278	107332189	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_107283696_107300140_107300223_107302034_107302115_107306378_107306648_107311681_107311738_107318751_107318880_107321982_107322119_107323889_107324018_107324833_107325005_107329542
transcript_197155.nic	chr9	+	826	3	ISM	ENSG00000119318.13	ENST00000358015.8	4114	10	-285	30113	-143	-4377	5prime_fragment	FALSE	canonical	3	103	junction_2	8.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGATGAGAAAAACTTTGTG	NA	False	NA	NA	False	TATAAA	-2	NA	107282993	107302076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_107283696_107300140_107300223_107302034
transcript_197157.known	chr9	-	2936	5	FSM	ENSG00000136826.15	ENST00000374672.5	2936	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	2.9474565306379	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTTTTTTATTGTTTTG	-107488872	True	NA	NA	False	AATAAA	-21	NA	107489769	107484851	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_107485927_107487027_107487193_107487294_107488268_107488929_107489051_107489167
transcript_197162.known	chr9	-	5951	37	FSM	ENSG00000070061.16	ENST00000674948.1	5951	37	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_36	35.9621285710124	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAAATGTGTTTATTGATA	-108934306	False	NA	NA	False	AATAGA	-1	NA	108934328	108867537	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_108869183_108874894_108874971_108877994_108878150_108878622_108878751_108879445_108879558_108880051_108880166_108881704_108881766_108882124_108882188_108889331_108889394_108891202_108891405_108892985_108893084_108893942_108894067_108896495_108896645_108896952_108897039_108897147_108897286_108898501_108898582_108898670_108898750_108899821_108899896_108900259_108900376_108901424_108901531_108901627_108901682_108902838_108902943_108903562_108903670_108906302_108906486_108908304_108908405_108911009_108911181_108912263_108912495_108916203_108916298_108917546_108917671_108918810_108918902_108919252_108919350_108922841_108922928_108926522_108926604_108927371_108927454_108929768_108929922_108930996_108931057_108933863
transcript_197163.known	chr9	-	5913	37	FSM	ENSG00000070061.16	ENST00000374647.10	5913	37	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_36	32.0522817507911	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTGAATTTTCCTGGAC	-108931023	True	NA	NA	False	AGTAAA	-16	NA	108934124	108867516	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_108869183_108874894_108874971_108877994_108878150_108878622_108878751_108879445_108879558_108880051_108880166_108881704_108881766_108882124_108882188_108889331_108889394_108891202_108891405_108892985_108893084_108893942_108894067_108896495_108896645_108896952_108897039_108897147_108897286_108898501_108898582_108898670_108898750_108899821_108899896_108900259_108900376_108901424_108901531_108901627_108901682_108902838_108902943_108903562_108903670_108906302_108906486_108908304_108908405_108911009_108911181_108912263_108912495_108916203_108916298_108917546_108917671_108918810_108918902_108919252_108919350_108922841_108922928_108926522_108926604_108927371_108927454_108929768_108929922_108930996_108931202_108933863
transcript_197165.known	chr9	-	5606	37	FSM	ENSG00000070061.16	ENST00000676416.1	5606	37	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	46.3731759815659	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTAAATGTGTTTATTGA	-108933921	False	NA	NA	False	NA	NA	NA	108933943	108867539	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_108869183_108874894_108874971_108877994_108878150_108878622_108878751_108879445_108879558_108880051_108880166_108881662_108881766_108882124_108882188_108889331_108889394_108891202_108891405_108892985_108893084_108893942_108894067_108896495_108896645_108896952_108897039_108897147_108897286_108898501_108898582_108898670_108898750_108899821_108899896_108900259_108900376_108901424_108901531_108901627_108901682_108902838_108902943_108903562_108903670_108906302_108906486_108908304_108908405_108911009_108911181_108912263_108912495_108916203_108916298_108917546_108917671_108918810_108918902_108919252_108919350_108922841_108922928_108926522_108926604_108927371_108927454_108929768_108929922_108930996_108931057_108933863
transcript_19717.known	chr1	+	543	3	FSM	ENSG00000154309.9	ENST00000450784.5	543	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	43.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGTTTTTTTTGGTAT	222813342	True	NA	4	True	AATAAA	-17	NA	222815021	222837384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_222815079_222835118_222835216_222836995
transcript_197172.known	chr9	-	5790	36	FSM	ENSG00000070061.16	ENST00000675979.1	5790	36	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_29	43.3654240149915	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAAATGTGTTTATTGATA	-108931012	True	NA	NA	False	AATAGA	-1	NA	108934113	108867537	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_108869183_108874894_108874971_108877994_108878150_108878622_108878751_108879445_108879558_108880051_108880166_108881704_108881766_108882124_108882188_108889331_108889394_108891202_108891405_108892985_108893084_108893942_108894067_108896495_108896645_108896952_108897039_108897147_108897286_108898501_108898582_108898670_108898750_108899821_108899896_108900259_108900376_108901424_108901531_108901627_108901682_108902838_108902943_108903562_108903670_108906302_108906486_108908304_108908405_108911009_108911181_108912263_108912495_108916203_108916298_108917546_108917671_108919252_108919350_108922841_108922928_108926522_108926604_108927371_108927454_108929768_108929922_108930996_108931202_108933863
transcript_197175.known	chr9	-	5695	35	FSM	ENSG00000070061.16	ENST00000675215.1	5695	35	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_29	44.5571150905252	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAAATGTGTTTATTGATA	-108931014	True	NA	NA	False	AATAGA	-1	NA	108934115	108867537	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_108869183_108874894_108874971_108877994_108878150_108878622_108878751_108879445_108879558_108880051_108880166_108881704_108881766_108882124_108882188_108889331_108889394_108891202_108891405_108892985_108893084_108893942_108894067_108896495_108896645_108896952_108897039_108897147_108897286_108898501_108898582_108898670_108898750_108899821_108899896_108900259_108900376_108901424_108901531_108901627_108901682_108902838_108902943_108903562_108903670_108906302_108906486_108908304_108908405_108911009_108911181_108912263_108912495_108916203_108916298_108917546_108917671_108922841_108922928_108926522_108926604_108927371_108927454_108929768_108929922_108930996_108931202_108933863
transcript_197177.known	chr9	-	5073	31	FSM	ENSG00000070061.16	ENST00000495759.6	5073	31	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_25	46.7970084513957	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAAATGTGTTTATTGATA	-108931012	True	NA	NA	False	AATAGA	-1	NA	108934113	108867537	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_108869183_108874894_108874971_108877994_108878150_108878622_108878751_108879445_108879558_108880051_108880166_108881704_108881766_108882124_108882188_108889331_108889394_108891202_108891405_108892985_108893084_108893942_108894067_108896495_108896645_108896952_108897039_108897147_108897286_108898501_108898582_108898670_108898750_108899821_108899896_108900259_108900376_108901424_108901531_108901627_108901682_108902838_108902943_108903562_108903670_108906302_108906486_108908304_108908405_108922841_108922928_108926522_108926604_108927371_108927454_108929768_108929922_108930996_108931202_108933863
transcript_19718.known	chr1	+	445	3	FSM	ENSG00000154309.9	ENST00000420335.5	445	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	40.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGAGCTGTCTCTCCAC	222813449	True	NA	-80	True	NA	NA	NA	222815128	222837300	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_222815172_222835118_222835216_222836995
transcript_197185.known	chr9	-	2522	19	FSM	ENSG00000119326.15	ENST00000374595.8	2522	19	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_1	148.401659253311	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAGTGTGATTTTTAAAA	-109005391	True	NA	0	True	AATAAA	-26	NA	109013522	108942568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_108942872_108942960_108943045_108943702_108943817_108943961_108944019_108948185_108948235_108952208_108952364_108952443_108952495_108955789_108955828_108965377_108965529_108970401_108970495_108972674_108972834_108976961_108977049_108979280_108979482_108983144_108983316_108984346_108984437_108990725_108990846_108992631_108992820_108999066_108999257_109013301
transcript_197186.known	chr9	-	2454	19	FSM	ENSG00000119326.15	ENST00000325551.9	2454	19	0	0	0	0	multi-exon	FALSE	canonical	3	509	junction_11	66.3156499787099	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTAATTGTAGTGTGAT	-109005368	True	NA	-8	True	AATAAA	-18	NA	109013499	108942576	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_108942835_108942960_108943045_108943702_108943817_108943961_108944019_108948185_108948235_108952208_108952364_108952443_108952495_108955789_108955828_108965377_108965529_108970401_108970495_108972674_108972834_108976961_108977049_108979280_108979482_108983144_108983316_108984346_108984437_108990725_108990846_108992631_108992820_108999066_108999257_109013301
transcript_19719.known	chr1	-	2982	10	FSM	ENSG00000143502.16	ENST00000681404.1	2982	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	6.05122169075116	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGATTAAAAATTAAAAGAAA	-223363939	True	NA	-31	True	NA	NA	NA	223364141	223220851	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_223222221_223223248_223223632_223227593_223227739_223229196_223229389_223235051_223235101_223264629_223264819_223268501_223268676_223292438_223292652_223363277_223363461_223364056
transcript_197197.known	chr9	+	1901	6	FSM	ENSG00000119328.12	ENST00000322940.11	1901	6	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_3	10.0677703589226	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATCATTCGATGTATTAA	108934366	False	NA	NA	False	AATAAA	-19	NA	108934399	108940954	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_108934566_108935637_108935690_108936307_108936438_108939195_108939273_108939384_108939455_108939548
transcript_197199.nic	chr9	-	823	4	ISM	ENSG00000119326.15	ENST00000374595.8	2522	19	-103	48156	-103	1171	5prime_fragment	FALSE	canonical	3	519	junction_2	70.7405274381116	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATTCATCACATTTTA	-109013613	False	NA	0	True	AATGAA	-41	NA	109013625	108990724	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_108990846_108992631_108992820_108999066_108999257_109013301
transcript_19720.known	chr1	-	2989	9	FSM	ENSG00000143502.16	ENST00000366878.9	2989	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	5.26782687642637	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAGTTTGAAGCGTGACT	-223363974	True	NA	-10	True	ATTAAA	-14	NA	223364176	223220830	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_223222221_223223248_223223632_223227593_223227739_223229196_223229389_223264629_223264819_223268501_223268676_223292438_223292652_223363277_223363461_223364056
transcript_197200.nic	chr9	-	432	2	ISM	ENSG00000119326.15	ENST00000374593.4	761	4	-60	7200	-50	-7200	5prime_fragment	FALSE	canonical	3	676	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCTTGTATTGAAGCTA	-109005441	True	NA	NA	False	AATAAA	-1	NA	109013572	108999095	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_108999257_109013301
transcript_197203.known	chr9	-	7999	18	FSM	ENSG00000106771.13	ENST00000374586.8	7999	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	94.2269585797153	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCTGTGTGTTGAAAAAC	-109115796	True	NA	2	True	AATAAA	-37	NA	109119947	109015134	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_109020506_109033306_109033502_109036205_109036381_109038016_109038118_109050282_109050429_109050569_109050693_109057190_109057323_109060353_109060453_109064476_109064568_109073355_109073439_109080838_109080944_109085996_109086021_109087172_109087343_109090921_109091156_109093474_109093592_109106507_109106610_109108452_109108571_109119334
transcript_197210.nnic	chr9	-	3997	17	NIC	ENSG00000106771.13	novel	7999	18	NA	NA	-23	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	111.785351651055	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-109115819	True	NA	NA	False	NA	NA	NA	109119970	109018925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_109020506_109033306_109033502_109036205_109036381_109038016_109038118_109050282_109050429_109050569_109050693_109057190_109057323_109060353_109060453_109064476_109064568_109073355_109073439_109080838_109080944_109085996_109086021_109087172_109087343_109093474_109093592_109106507_109106610_109108452_109108571_109119334
transcript_197222.known	chr9	-	4006	16	FSM	ENSG00000095203.15	ENST00000374557.4	4006	16	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_10	22.8142255816166	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTTGAGTGGTTTCAGT	-109320694	False	270	-2	True	AATAAA	-17	NA	109320964	109239730	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_109241810_109243617_109243683_109247755_109247790_109251480_109251512_109253440_109253551_109255510_109255681_109255773_109255844_109256135_109256225_109256392_109256481_109258176_109258298_109263049_109263103_109264979_109265025_109267472_109267552_109268390_109268434_109279816_109279922_109320140
transcript_197225.known	chr9	-	6704	26	FSM	ENSG00000070159.14	ENST00000374541.4	6704	26	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_13	6.986386762841	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTATTGTCTGTTGAC	-109497890	True	NA	NA	False	TATAAA	-19	NA	109498307	109375699	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_109379634_109381651_109381788_109382301_109382448_109383422_109383552_109389232_109389380_109391137_109391200_109391470_109391562_109404447_109404609_109406461_109406619_109408320_109408378_109409998_109410077_109410228_109410416_109420423_109420601_109422717_109422853_109426949_109427123_109428620_109428685_109433072_109433162_109436882_109436971_109438113_109438235_109445239_109445293_109448810_109448856_109454495_109454575_109457172_109457216_109457291_109457400_109463296_109463452_109498218
transcript_197227.nic	chr9	-	4037	25	NIC	ENSG00000070159.14	novel	6704	26	NA	NA	-14	-2552	combination_of_known_junctions	FALSE	canonical	1	4	junction_16	6.24666577730339	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGTAAACATTTAATGTG	-109497910	True	NA	-23	True	AATAAA	-1	NA	109498327	109378251	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_109379634_109381651_109381788_109382301_109382448_109383422_109383552_109389232_109389380_109391137_109391200_109391470_109391562_109404447_109404609_109406461_109406619_109408320_109408378_109409998_109410077_109410228_109410416_109420423_109420601_109426949_109427123_109428620_109428685_109433072_109433162_109436882_109436971_109438113_109438235_109445239_109445293_109448810_109448856_109454495_109454575_109457172_109457216_109457291_109457400_109463296_109463452_109498218
transcript_197233.known	chr9	+	4718	10	FSM	ENSG00000157654.19	ENST00000302798.7	4718	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	26.4033293822793	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAATTTCTTTTTTATGA	109780441	False	NA	NA	False	NA	NA	NA	109780455	110169909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_109780534_109867490_109867572_109880550_109880682_109923734_109923850_109925060_109925083_109931926_109932029_110015953_110016040_110136126_110138540_110156318_110156498_110168398
transcript_197237.known	chr9	+	6866	4	FSM	ENSG00000157654.19	ENST00000374525.5	6866	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	3.85861230093008	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGCTGCTTGTTTGACC	110044499	True	NA	14	True	ATTAAA	-28	NA	110048695	110172512	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_110048856_110136126_110138540_110156318_110156498_110168398
transcript_197241.known	chr9	+	3101	4	FSM	ENSG00000157654.19	ENST00000259318.7	3101	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	32.4174164437712	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCGGAACTGAGACCAGCCT	110125250	True	NA	NA	False	AAAACA	-31	NA	110125500	110168811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_110125597_110136126_110138540_110156318_110156498_110168398
transcript_197245.nic	chr9	+	2882	3	NIC	ENSG00000157654.19	novel	6866	4	NA	NA	42	18	combination_of_known_junctions	FALSE	canonical	3	38	junction_2	15.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAACGAAAAGGAAGTCCC	110044443	True	NA	NA	False	AATATA	-13	NA	110048639	110168651	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_110048856_110136126_110138540_110168398
transcript_197246.nic	chr9	+	3657	3	NIC	ENSG00000157654.19	novel	6866	4	NA	NA	42	-483	combination_of_known_junctions	FALSE	canonical	3	38	junction_2	15.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCGAACTCTGCCTTGGAGA	110044443	True	NA	-50	True	NA	NA	NA	110048639	110169426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_110048856_110136126_110138540_110168398
transcript_197247.nic	chr9	+	3809	3	NIC	ENSG00000157654.19	novel	6866	4	NA	NA	42	-331	combination_of_known_junctions	FALSE	canonical	3	38	junction_2	15.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAGAGAGAAAAAGGGAGG	110044443	True	NA	102	True	AAGAAA	-12	NA	110048639	110169578	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_110048856_110136126_110138540_110168398
transcript_197251.known	chr9	+	4400	5	FSM	ENSG00000157654.19	ENST00000434623.6	4400	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	36.8874978820738	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAATTTCTTTTTTATGA	110048583	False	NA	NA	False	NA	NA	NA	110048597	110169909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_110048856_110136126_110138540_110156318_110156498_110162093_110162133_110168398
transcript_197255.known	chr9	-	737	5	FSM	ENSG00000136810.13	ENST00000374517.6	737	5	0	0	0	0	multi-exon	FALSE	canonical	3	7766	junction_4	217.071992666028	2207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTTGACAGAGAAAATAG	-110208292	True	NA	NA	False	AATAAA	-22	NA	110256507	110243809	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_110244220_110244777_110244844_110250819_110250880_110251357_110251463_110256411
transcript_197256.known	chr9	-	635	4	FSM	ENSG00000136810.13	ENST00000374515.9	635	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	3803.90965542909	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTTTTGACAGAGAAAATA	-110208251	True	NA	NA	False	AATAAA	-21	NA	110256466	110243810	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_110244220_110244777_110244844_110251357_110251463_110256411
transcript_197269.known	chr9	-	7078	49	FSM	ENSG00000136813.15	ENST00000338205.9	7078	49	0	0	0	0	multi-exon	TRUE	canonical	3	257	junction_48	92.5094003294019	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGAACATGTGTGTTTGT	-111474142	True	NA	-5	True	AATAAA	-21	NA	111484357	111360691	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_111362170_111363587_111363660_111366238_111366328_111366521_111366628_111369034_111369174_111370434_111370628_111370721_111370766_111371620_111371830_111372428_111372621_111373169_111373237_111373314_111373407_111373971_111374039_111375112_111375203_111376475_111376542_111378579_111378731_111383210_111383333_111384521_111384570_111385336_111385443_111386376_111386457_111389555_111389724_111389983_111390102_111391755_111391825_111392767_111392883_111393679_111393735_111394159_111394306_111397029_111397154_111408570_111408673_111410040_111410214_111410979_111411143_111412013_111412149_111413894_111413987_111414428_111414652_111416271_111416353_111417882_111418007_111420016_111420121_111421920_111422044_111422133_111422201_111423198_111423249_111425417_111425497_111425742_111425829_111428041_111428162_111430546_111430629_111433232_111433373_111436939_111437109_111440371_111440522_111442305_111442425_111444377_111444495_111451424_111451556_111484115
transcript_19727.known	chr1	+	3366	21	FSM	ENSG00000162909.18	ENST00000295006.6	3366	21	0	0	0	0	multi-exon	FALSE	canonical	2	87	junction_10	23.2969418593943	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGAAACTTTGATAATCT	223710453	True	NA	NA	False	ATTAAA	-32	NA	223712538	223776018	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_223712878_223717761_223717832_223744099_223744219_223745305_223745440_223746996_223747166_223749038_223749123_223750889_223750976_223751996_223752072_223752795_223752957_223755479_223755650_223757368_223757381_223759269_223759482_223761580_223761618_223762185_223762252_223764149_223764208_223766366_223766432_223769840_223769910_223770446_223770526_223771808_223771926_223772180_223772240_223774833
transcript_197285.nic	chr9	-	1356	11	NIC	ENSG00000106853.20	novel	1941	11	NA	NA	-34	-1	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	143.088643854081	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAATTAGTGATGGAGG	-111599389	False	NA	-43	True	AATAAA	-15	NA	111599441	111562973	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_111563232_111564156_111564263_111570090_111570210_111574733_111574843_111578795_111578952_111583471_111583590_111585997_111586166_111592925_111592983_111594221_111594268_111597316_111597433_111599338
transcript_197286.known	chr9	-	1941	11	FSM	ENSG00000106853.20	ENST00000466771.6	1941	11	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	159.076836780218	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTAGCCGGGCGTGGTGGCT	NA	False	NA	NA	False	AATAAA	-24	NA	111599893	111562576	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_111563232_111564156_111564263_111570090_111570210_111574733_111574843_111578795_111578952_111583471_111583590_111585997_111586166_111592925_111592983_111594221_111594268_111597316_111597433_111599602
transcript_197289.known	chr9	-	1223	10	FSM	ENSG00000106853.20	ENST00000309195.9	1223	10	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	45.9720795566769	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTGATGGAGGATGGAAG	-111596475	True	NA	-36	True	AATAAA	-22	NA	111599407	111562966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_111563232_111570090_111570210_111574733_111574843_111578795_111578952_111583471_111583590_111585997_111586166_111592925_111592983_111594221_111594268_111597316_111597433_111599338
transcript_197290.known	chr9	-	1599	10	FSM	ENSG00000106853.20	ENST00000407693.7	1599	10	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_9	103.618960083997	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTGGCTCATGCCTGTA	-111598882	True	NA	NA	False	AATAAA	-34	NA	111599647	111562566	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_111563232_111570090_111570210_111574733_111574843_111578795_111578952_111583471_111583590_111585997_111586166_111592925_111592983_111594221_111594268_111597316_111597433_111599602
transcript_197300.known	chr9	+	1239	6	FSM	ENSG00000173258.13	ENST00000355824.7	1239	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	21.7494827524702	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAGAAT	111514287	True	NA	NA	False	NA	NA	NA	111525188	111539761	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_111525263_111527267_111527808_111530874_111530964_111533738_111533866_111534260_111534354_111539445
transcript_197302.known	chr9	+	2433	6	FSM	ENSG00000173258.13	ENST00000358151.8	2433	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	20.6106768447812	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAAAAAAGGAAT	111514257	True	NA	NA	False	NA	NA	NA	111525158	111577844	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_111525263_111527267_111527808_111530874_111530964_111533738_111533866_111534260_111534354_111576364
transcript_197303.known	chr9	-	847	4	FSM	ENSG00000106853.20	ENST00000374308.1	847	4	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_3	51.227162933567	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACAGTATACAGAGATAAG	-111596475	True	NA	NA	False	NA	NA	NA	111599407	111592366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_111592983_111594221_111594268_111597316_111597433_111599338
transcript_197304.known	chr9	-	1061	4	FSM	ENSG00000106853.20	ENST00000374313.5	1061	4	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_3	167.572869721404	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAACACAGTCTTTCCAT	-111599764	False	NA	NA	False	AATATA	-37	NA	111599816	111592297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_111592983_111594221_111594268_111597316_111597433_111599602
transcript_197307.known	chr9	+	800	2	FSM	ENSG00000173258.13	ENST00000374374.3	800	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTTGTAGTTTTCTTG	111514314	True	NA	NA	False	AAAAAG	-9	NA	111525215	111528020	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_111525263_111527267
transcript_197308.known	chr9	+	2498	5	FSM	ENSG00000059769.20	ENST00000447096.1	2498	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	36.4623093070091	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTGATATGACGTTTT	111629331	True	NA	NA	False	AATAAA	-21	NA	111631359	111654351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_111631744_111642856_111643095_111647106_111647260_111649452_111649924_111653099
transcript_197310.nic	chr9	+	965	4	ISM	ENSG00000059769.20	ENST00000447096.1	2498	5	-53	4762	-27	-4756	5prime_fragment	FALSE	canonical	3	41	junction_2	24.8327740429189	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCCAAAGAAGAAATTCGTG	111629278	True	NA	NA	False	AAAAAG	-26	NA	111631306	111649589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_111631744_111642856_111643095_111647106_111647260_111649452
transcript_197312.known	chr9	+	2280	4	FSM	ENSG00000059769.20	ENST00000313525.4	2280	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	28.1780056072107	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAAGTTTGTTGATATGA	111629305	True	NA	NA	False	AATAAA	-15	NA	111631333	111654345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_111631744_111647106_111647260_111649452_111649924_111653099
transcript_197314.nic	chr9	+	720	3	ISM	ENSG00000059769.20	ENST00000313525.4	2280	4	-20	4756	-20	-4756	5prime_fragment	FALSE	canonical	3	60	junction_1	18	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCCAAAGAAGAAATTCGTG	111629285	True	NA	NA	False	AAAAAG	-26	NA	111631313	111649589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_111631744_111647106_111647260_111649452
transcript_197316.known	chr9	+	1201	3	FSM	ENSG00000242616.4	ENST00000374293.5	1201	3	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_2	110.5	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTTTCTATGACAGCAA	111654709	True	NA	15	True	AATAAA	-17	NA	111661604	111670226	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_111661716_111666814_111666947_111669268
transcript_197318.nic	chr9	+	1096	3	NIC	ENSG00000242616.4	novel	1201	3	NA	NA	-34	-136	combination_of_known_splicesites	FALSE	canonical	3	178	junction_2	192	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCTTAACTTCACAAGT	111654675	True	NA	NA	False	ATTAAA	-30	NA	111661570	111670090	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_111661716_111666814_111666947_111669271
transcript_197319.nic	chr9	+	1446	3	NIC	ENSG00000242616.4	novel	1201	3	NA	NA	-245	3	combination_of_known_splicesites	FALSE	canonical	3	178	junction_2	192	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCTATGACAGCAATAT	NA	False	NA	18	True	AATAAA	-20	NA	111661359	111670229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_111661716_111666814_111666947_111669271
transcript_197324.nnic	chr9	+	2194	10	NNC	ENSG00000148154.10	novel	3959	9	NA	NA	-54	-1766	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	74.9607304600956	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATATAAGAGCTGGAGTCT	111894547	True	NA	33	True	NA	NA	NA	111896759	111933603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_111896903_111896955_111897314_111914604_111914747_111922848_111922952_111924776_111924879_111926383_111926497_111929499_111929679_111931270_111931358_111932169_111932360_111932826
transcript_197326.known	chr9	+	3959	9	FSM	ENSG00000148154.10	ENST00000374279.4	3959	9	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_4	28.1044369272896	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTAGCAATAGTGTATTTT	111894601	True	NA	9	True	AATAAA	-20	NA	111896813	111935369	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_111897314_111914604_111914747_111922848_111922952_111924776_111924879_111926383_111926497_111929499_111929679_111931270_111931358_111932169_111932360_111932826
transcript_197332.known	chr9	-	2754	18	FSM	ENSG00000106868.17	ENST00000374264.6	2754	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6.04424287833624	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGAATCCATTCTTTACA	-112175257	False	NA	1	True	TATAAA	-19	NA	112175267	112041078	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_112041493_112041866_112041961_112042100_112042166_112052398_112052439_112058427_112058687_112062936_112063034_112078537_112078725_112080073_112080166_112098469_112098663_112102175_112102286_112111653_112111841_112112770_112112869_112124256_112124437_112142319_112142500_112143470_112143624_112149243_112149400_112157499_112157614_112175132
transcript_197333.known	chr9	-	3015	17	FSM	ENSG00000106868.17	ENST00000374270.8	3015	17	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	4.08837911035657	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTTCTTCCCTTGGTTA	-112174900	True	NA	-1	True	AGTAAA	-17	NA	112175297	112040782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_112041493_112041866_112041961_112052398_112052439_112058427_112058687_112062936_112063034_112078537_112078725_112080073_112080166_112098469_112098663_112102175_112102286_112111653_112111841_112112770_112112869_112124256_112124437_112142319_112142500_112143470_112143624_112149243_112149400_112157499_112157614_112175132
transcript_197337.known	chr9	-	2973	16	FSM	ENSG00000106868.17	ENST00000374263.7	2973	16	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	5.22642856600524	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTGTTCTTCCCTTGGT	-112174900	True	NA	-3	True	AGTAAA	-15	NA	112175297	112040784	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_112041493_112041866_112041961_112058427_112058687_112062936_112063034_112078537_112078725_112080073_112080166_112098469_112098663_112102175_112102286_112111653_112111841_112112770_112112869_112124256_112124437_112142319_112142500_112143470_112143624_112149243_112149400_112157499_112157614_112175132
transcript_197339.known	chr9	-	3413	15	FSM	ENSG00000119314.16	ENST00000374255.6	3413	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_14	98.803143798615	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCTATTATTTCTTCAA	-112319796	True	NA	NA	False	AAGAAA	-1	NA	112333625	112222244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_112223984_112224132_112224211_112227410_112227628_112228379_112228473_112231379_112231414_112232098_112232239_112234819_112234898_112250928_112251104_112252677_112252789_112262434_112262600_112268048_112268196_112275843_112276014_112297840_112297917_112330440_112330475_112333469
transcript_19734.nic	chr1	+	2113	17	ISM	ENSG00000162909.18	ENST00000295006.6	3366	21	-203	6125	-203	-2817	5prime_fragment	FALSE	canonical	2	87	junction_10	24.2895939653177	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATTCAAAAATACCAAGTAA	NA	False	NA	NA	False	GGGGCT	-28	NA	223712335	223769893	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_223712878_223717761_223717832_223744099_223744219_223745305_223745440_223746996_223747166_223749038_223749123_223750889_223750976_223751996_223752072_223752795_223752957_223755479_223755650_223757368_223757381_223759269_223759482_223761580_223761618_223762185_223762252_223764149_223764208_223766366_223766432_223769840
transcript_197341.known	chr9	-	7192	14	FSM	ENSG00000119314.16	ENST00000374257.6	7192	14	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_12	46.9637906597848	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTGTGTTCTTGTCTG	-112319790	True	NA	-3	True	AATAAA	-28	NA	112333619	112218434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_112223984_112224132_112224211_112227410_112227628_112228379_112228473_112231379_112231414_112232098_112232239_112234819_112234898_112250928_112251104_112252677_112252789_112262434_112262600_112268048_112268196_112275843_112276014_112297831_112297917_112333469
transcript_197349.known	chr9	-	2755	13	FSM	ENSG00000119314.16	ENST00000343327.6	2755	13	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_11	64.2527020616427	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGGTTTTCAATAAGTAA	-112319749	True	NA	NA	False	TTTAAA	-21	NA	112333578	112222660	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_112223984_112224132_112224211_112227410_112227628_112228379_112228473_112231379_112231414_112232098_112232239_112234819_112234898_112250928_112251104_112252677_112252789_112262434_112262600_112268048_112268196_112297831_112297917_112333469
transcript_197362.known	chr9	+	11795	4	FSM	ENSG00000165185.15	ENST00000337530.11	11795	4	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_3	17.5562587763516	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTTTTCTTAGCTTA	112485581	True	NA	14	True	AATAAA	-16	NA	112486826	112669397	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_112487119_112574056_112575252_112645649_112645823_112659262
transcript_197366.known	chr9	+	2643	3	FSM	ENSG00000165185.15	ENST00000374244.3	2643	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	47	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAACTGTCAAAAAGG	112485769	False	NA	NA	False	NA	NA	NA	112487014	112619214	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_112487119_112574056_112575252_112617870
transcript_197372.nic	chr9	+	3284	2	ISM	ENSG00000165185.15	ENST00000374244.3	2643	3	-181	42159	7	-42159	5prime_fragment	FALSE	canonical	3	118	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTATCTTATTGGGGTTT	112485588	True	NA	NA	False	AATAAA	-21	NA	112486833	112577055	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_112487119_112574056
transcript_197373.known	chr9	+	3174	11	FSM	ENSG00000119471.15	ENST00000398805.8	3174	11	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_8	11.1986606342009	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAATTTGTTGAGATTTTA	112378968	True	NA	12	True	AATAAA	-18	NA	112380107	112472405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_112380181_112403994_112404159_112405623_112405723_112408906_112409022_112416840_112416945_112418859_112418959_112438430_112438626_112441698_112441771_112454012_112454163_112459448_112459578_112470431
transcript_197383.known	chr9	+	2983	9	FSM	ENSG00000119471.15	ENST00000398803.1	2983	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_3	34.0330721504833	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAATTTGTTGAGATTTTA	112378940	True	NA	12	True	AATAAA	-18	NA	112380079	112472405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_112380181_112403994_112404159_112405623_112405723_112418859_112418959_112438430_112438626_112441698_112441771_112454012_112454163_112459448_112459578_112470431
transcript_197389.known	chr9	-	964	6	FSM	ENSG00000148153.14	ENST00000497712.6	964	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	91.7941174585823	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTATCAGTATACCTTTTG	-112716931	True	NA	30	True	NA	NA	NA	112718089	112687096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_112687634_112689526_112689618_112694130_112694234_112701831_112701881_112716460_112716542_112717986
transcript_197390.known	chr9	-	4114	5	FSM	ENSG00000148153.14	ENST00000374242.9	4114	5	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_3	13.8021737418423	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTTTTCCTGAACAAT	-112716959	True	NA	0	True	AATAAA	-31	NA	112718117	112683925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_112687634_112689526_112689618_112694130_112694234_112716460_112716542_112717986
transcript_197399.known	chr9	-	874	4	FSM	ENSG00000148153.14	ENST00000374236.5	874	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	84.581321815162	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTGCTGTTTATAGGAT	-112716991	True	NA	10	True	AATGAA	-27	NA	112718149	112687116	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_112687634_112689526_112689618_112694130_112694234_112717986
transcript_19740.nnic	chr1	+	2397	10	NIC	ENSG00000162909.18	novel	3366	21	NA	NA	-203	828	combination_of_known_splicesites	FALSE	canonical	2	3	junction_9	49.8734200220053	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGACCCACCTGTAGTAC	NA	False	NA	NA	False	ATTAAA	-17	NA	223712335	223758325	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_223712878_223717761_223717832_223744099_223744219_223745305_223745440_223746996_223747166_223749038_223749123_223750889_223750976_223751996_223752072_223752795_223752957_223757368
transcript_197407.known	chr9	-	1664	1	FSM	ENSG00000226609.2	ENST00000671283.1	1664	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTTTACTATTCTGAGT	-112750535	True	NA	NA	False	AATAAA	-18	NA	112750565	112748901	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_112748900_112750600
transcript_197409.nnic	chr9	-	1174	4	NIC	ENSG00000228623.7	novel	2414	5	NA	NA	-7	-1163	combination_of_known_splicesites	FALSE	canonical	2	12	junction_3	82.5321486183145	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAAGCCATAGTTCAGTA	-113008643	True	NA	-27	True	AATAAA	-5	NA	113012237	112998282	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_112999139_112999664_112999815_113001993_113002074_113012149
transcript_197412.known	chr9	-	6277	4	FSM	ENSG00000136866.14	ENST00000374227.8	6277	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	2.62466929133727	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCACATTAGGATTTTAA	-113055546	True	NA	NA	False	AATAAA	-19	NA	113056724	113038376	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_113044269_113049361_113049497_113049790_113049873_113056556
transcript_197413.known	chr9	-	2451	4	FSM	ENSG00000136866.14	ENST00000555206.5	2451	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	6.59966329107444	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATCTTTTTAAAAGGGTT	-113055581	True	NA	NA	False	NA	NA	NA	113056759	113042240	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_113044269_113049361_113049497_113049790_113049876_113056556
transcript_197423.known	chr9	-	8807	28	FSM	ENSG00000119321.10	ENST00000446284.6	8807	28	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_18	10.4739535851418	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTGCTTATTAGAGCTG	-113220166	True	NA	1	True	AATAAA	-18	NA	113221318	113161005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_113166156_113168459_113168557_113169223_113169943_113170521_113170630_113171580_113171707_113173452_113173606_113174427_113174584_113176536_113176674_113178629_113178802_113182765_113182869_113183750_113183846_113184291_113184400_113184694_113184805_113186248_113186364_113187792_113187900_113188388_113188492_113190470_113190579_113193491_113193550_113194026_113194170_113196931_113197079_113198854_113198924_113199813_113199964_113202530_113202630_113202960_113203036_113206508_113206579_113207211_113207297_113211476_113211593_113221190
transcript_197424.nnic	chr9	-	4258	28	NNC	ENSG00000119321.10	novel	8807	28	NA	NA	0	873	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	14.0692974350356	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCCAAGCCCTTGGAGAA	-113220157	True	NA	-18	True	AATAAA	-28	NA	113221309	113165521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_113166156_113168459_113168557_113169223_113169943_113170521_113170630_113171580_113171707_113173452_113173606_113174427_113174584_113176536_113176674_113178629_113178802_113182789_113182869_113183750_113183846_113184291_113184400_113184694_113184805_113186248_113186364_113187792_113187900_113188388_113188492_113190470_113190579_113193491_113193550_113194026_113194170_113196931_113197079_113198854_113198924_113199813_113199964_113202530_113202630_113202960_113203036_113206508_113206579_113207211_113207297_113211476_113211593_113221190
transcript_197438.nic	chr9	-	2071	20	ISM	ENSG00000119321.10	ENST00000446284.6	8807	28	-2	17716	-2	5570	5prime_fragment	FALSE	canonical	3	35	junction_10	8.8821149935701	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAACAGAGCTGCAGATGC	-113220168	True	NA	NA	False	NA	NA	NA	113221320	113178721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_113178802_113182765_113182869_113183750_113183846_113184291_113184400_113184694_113184805_113186248_113186364_113187792_113187900_113188388_113188492_113190470_113190579_113193491_113193550_113194026_113194170_113196931_113197079_113198854_113198924_113199813_113199964_113202530_113202630_113202960_113203036_113206508_113206579_113207211_113207297_113211476_113211593_113221190
transcript_19744.known	chr1	-	4741	19	FSM	ENSG00000143514.17	ENST00000391878.6	4741	19	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_17	67.0909876010478	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGATAGAAGCCTACTTT	-223842881	True	NA	-27	True	AATAAA	-16	NA	223845930	223779898	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_223780895_223784114_223784315_223789007_223789175_223792388_223792523_223793302_223793441_223795814_223796591_223798214_223798678_223799898_223800048_223800699_223800811_223802115_223802345_223802730_223802896_223803270_223803453_223804173_223804349_223806845_223806948_223810430_223810514_223814239_223814354_223818205_223818338_223821219_223821368_223845653
transcript_197440.known	chr9	-	2815	14	FSM	ENSG00000119321.10	ENST00000414250.2	2815	14	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	8.11091747267353	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAGAAAAATGTGAACAAA	-113220166	True	NA	NA	False	NA	NA	NA	113221318	113186435	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_113187900_113188388_113188492_113190470_113190579_113193491_113193550_113194026_113194170_113196931_113197079_113198854_113198924_113199813_113199964_113202530_113202630_113202960_113203036_113206508_113206579_113207211_113207297_113211476_113211593_113221190
transcript_197441.known	chr9	+	1723	4	FSM	ENSG00000136867.11	ENST00000259392.8	1723	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	4.08248290463863	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGACTGTTCTGTTCTCCT	113150805	True	NA	18	True	ATTAAA	-44	NA	113151006	113164140	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_113151081_113157726_113157794_113161508_113161699_113162748
transcript_197443.known	chr9	-	575	3	FSM	ENSG00000119321.10	ENST00000462889.1	575	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAGTAAGGGAATAGTAT	-113220127	True	NA	NA	False	AAGAAA	-43	NA	113221279	113206926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_113207297_113211476_113211593_113221190
transcript_197445.known	chr9	+	4762	5	FSM	ENSG00000136868.11	ENST00000374212.5	4762	5	0	0	0	0	multi-exon	FALSE	canonical	3	563	junction_4	32.962099447699	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGTCTTTCTGCCCAGA	113212813	True	NA	11	True	AATAAA	-22	NA	113221543	113264492	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_113221679_113256113_113256278_113257112_113257186_113258693_113258863_113260271
transcript_197456.nnic	chr9	-	855	4	NNC	ENSG00000176386.9	novel	871	4	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_2	490.151677204788	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTATAACAGTACTGTT	-113261629	False	NA	-50	True	AATAAA	-33	NA	113275584	113266991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_113267440_113272426_113272521_113273328_113273439_113275381
transcript_197457.nnic	chr9	-	843	4	NNC	ENSG00000176386.9	novel	871	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_3	565.945227031733	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTATAACAGTACTGTT	-113261617	True	NA	-50	True	AATAAA	-33	NA	113275572	113266991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_113267440_113272426_113272549_113273328_113273411_113275381
transcript_197459.known	chr9	-	871	4	FSM	ENSG00000176386.9	ENST00000374206.4	871	4	0	0	0	0	multi-exon	FALSE	canonical	3	784	junction_3	225.04271199535	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTATAACAGTACTGTT	-113261617	True	NA	-50	True	AATAAA	-33	NA	113275572	113266991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_113267440_113272426_113272549_113273328_113273439_113275381
transcript_197460.known	chr9	+	475	2	FSM	ENSG00000136868.11	ENST00000496650.1	475	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTTTTCTAGTTTCTG	113212856	True	NA	NA	False	AATAAA	-16	NA	113221586	113227660	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_113221679_113227277
transcript_197470.known	chr9	+	2897	14	FSM	ENSG00000136875.13	ENST00000374198.5	2897	14	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_1	28.3129175779387	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTGGTCCATAGAGGTC	113268493	True	NA	28	True	TATAAA	-38	NA	113275657	113292905	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_113275771_113276547_113276726_113278944_113279132_113282645_113282734_113283131_113283212_113283388_113283483_113284294_113284390_113286231_113286291_113286704_113286829_113288174_113288265_113290465_113290589_113290699_113290808_113290897_113291017_113291466
transcript_19748.known	chr1	-	4632	18	FSM	ENSG00000143514.17	ENST00000343537.12	4632	18	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_9	20.0702917018298	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAGCCTACTTTACATTT	-223842898	True	NA	-21	True	AATAAA	-22	NA	223845947	223779892	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_223780895_223784114_223784315_223789007_223789175_223792388_223792523_223793302_223793441_223795814_223796591_223798214_223798678_223799898_223800048_223800699_223800811_223802115_223802345_223802730_223802896_223803270_223803453_223804173_223804349_223806845_223806948_223810430_223810514_223814239_223814354_223821219_223821368_223845653
transcript_197482.known	chr9	+	4020	14	FSM	ENSG00000136875.13	ENST00000374199.9	4020	14	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	72.3189025679943	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTATTAGTTCCCTTC	113268477	True	NA	5	True	TTTAAA	-1	NA	113275641	113294009	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_113275771_113276544_113276726_113278944_113279132_113282645_113282734_113283131_113283212_113283388_113283483_113284294_113284390_113286231_113286291_113286704_113286829_113288174_113288265_113290465_113290589_113290699_113290808_113290897_113291017_113291466
transcript_197484.known	chr9	-	849	2	FSM	ENSG00000165188.14	ENST00000416588.2	849	2	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAACGAAAAGCTTGAA	NA	False	NA	NA	False	TTTAAA	-8	NA	113298865	113297442	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_113298222_113298795
transcript_197487.known	chr9	+	2328	6	FSM	ENSG00000119411.11	ENST00000374183.5	2328	6	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_3	11.1175536877498	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGATTTATTCCATGTT	113348693	True	NA	4	True	ATTAAA	-14	NA	113349540	113371222	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_113349781_113354239_113354339_113360506_113360738_113362368_113362395_113368258_113368384_113369615
transcript_197490.nic	chr9	+	1106	5	ISM	ENSG00000119411.11	ENST00000374183.5	2328	6	-21	2475	-21	-2475	5prime_fragment	FALSE	canonical	3	97	junction_3	12.1114615137893	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAACTGCCTGATTTGCCT	113348672	True	NA	NA	False	GATAAA	-36	NA	113349519	113368747	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_113349781_113354239_113354339_113360506_113360738_113362368_113362395_113368258
transcript_197493.known	chr9	+	2213	5	FSM	ENSG00000119411.11	ENST00000462085.1	2213	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	42.1485468314152	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATGTTCTTTGTTGATA	113348694	True	NA	15	True	ATTAAA	-25	NA	113349541	113371233	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_113349781_113354239_113354339_113360506_113360738_113362368_113362395_113369615
transcript_197499.known	chr9	-	1481	3	FSM	ENSG00000119431.10	ENST00000374180.4	1481	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	22	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTCCTAGCCTCTGCCC	-113376206	True	NA	-9	True	AATAAA	-37	NA	113376986	113373421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_113374530_113375452_113375568_113376728
transcript_197503.known	chr9	-	3129	12	FSM	ENSG00000148218.16	ENST00000409155.8	3129	12	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_5	8.45112345213971	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTACTGAATGTCTTGT	-113401269	False	4920	-5	True	AATAAA	-43	NA	113401284	113386311	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_113388362_113388976_113389107_113389437_113389525_113389598_113389687_113389772_113389829_113390404_113390494_113390592_113390677_113390797_113390934_113391526_113391624_113392118_113392170_113393446_113393635_113401211
transcript_197504.known	chr9	-	3247	12	FSM	ENSG00000148218.16	ENST00000482847.5	3247	12	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_10	23.9900116956417	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACAGTTTCTACTGAAT	-113401228	False	NA	-12	True	AATAAA	-36	NA	113401243	113386318	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_113388362_113388976_113389107_113389437_113389525_113389598_113389687_113389772_113389829_113390404_113390494_113390592_113390677_113390797_113390934_113391526_113391624_113392118_113392336_113393446_113393635_113401211
transcript_197511.nic	chr9	-	3264	11	NIC	ENSG00000148218.16	novel	3129	12	NA	NA	-15	0	intron_retention	FALSE	canonical	3	73	junction_5	8.71837140755084	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACAGTTTCTACTGAAT	-113401290	False	4920	-12	True	AATAAA	-36	NA	113401305	113386318	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_113388362_113388976_113389107_113389437_113389525_113389598_113389687_113389772_113389829_113390404_113390494_113390592_113390934_113391526_113391624_113392118_113392170_113393446_113393635_113401211
transcript_197521.known	chr9	-	547	2	FSM	ENSG00000148218.16	ENST00000494848.1	547	2	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGTAAAGTGCTATGTAC	-113401269	False	4920	NA	False	NA	NA	NA	113401284	113393160	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_113393635_113401211
transcript_197522.known	chr9	+	1994	14	FSM	ENSG00000157653.12	ENST00000374165.6	1994	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.85963543006786	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTATTTTCTGTTTCTAG	113410648	True	NA	NA	False	ATTAAA	-23	NA	113410746	113429690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_113411002_113413444_113413645_113413758_113413895_113419107_113419166_113421102_113421204_113422548_113422586_113423325_113423499_113424165_113424317_113425018_113425077_113425343_113425421_113425642_113425731_113428146_113428224_113428899_113428964_113429171
transcript_197524.known	chr9	-	2194	5	FSM	ENSG00000148229.13	ENST00000374171.5	2194	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	161.318590063266	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGCCTCCTGTTTCATGC	-113410660	False	NA	-4	True	AATAAA	-16	NA	113410675	113407234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_113408984_113409609_113409729_113410054_113410141_113410227_113410409_113410616
transcript_197526.known	chr9	-	455	3	FSM	ENSG00000148229.13	ENST00000475080.1	455	3	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAAAAGAAGAAGGACAAAG	-113405430	True	NA	-13	True	NA	NA	NA	113410350	113408943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_113408984_113409609_113409729_113410054
transcript_197529.nic	chr9	+	4140	23	NIC	ENSG00000138835.22	novel	4211	23	NA	NA	-29	0	intron_retention	FALSE	canonical	2	4	junction_19	13.6591476326155	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTGACCCTTTTTGTG	113463195	True	NA	9	True	AATAAA	-18	NA	113463699	113597729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_113463882_113479490_113479542_113483058_113483118_113484137_113484233_113485624_113485694_113495785_113495847_113497313_113497405_113498024_113498081_113505441_113505524_113506387_113506494_113507286_113507639_113508540_113508581_113514457_113514655_113517540_113517625_113522929_113523042_113529220_113529265_113536795_113536919_113583449_113584428_113591332_113591398_113594429_113594532_113594918_113594981_113595598_113595766_113596767
transcript_197534.known	chr9	+	2542	18	FSM	ENSG00000138835.22	ENST00000317613.10	2542	18	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_17	6.46470320612266	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTACTTAGAGTGCTGT	113463227	True	NA	NA	False	AAGAAA	-24	NA	113463731	113542089	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_113463882_113479490_113479542_113483058_113483118_113484137_113484233_113485624_113485694_113495785_113495847_113497313_113497405_113498024_113498081_113505441_113505524_113506387_113506494_113507286_113507639_113508540_113508581_113514457_113514655_113517540_113517625_113522929_113523042_113529220_113529265_113536795_113536919_113541319
transcript_197537.known	chr9	+	3689	16	FSM	ENSG00000138835.22	ENST00000343817.9	3689	16	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_12	15.911700796025	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTTTGTGTGTTCCTGG	113501280	True	NA	18	True	AATAAA	-27	NA	113501426	113597738	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_113501631_113505441_113505524_113506387_113506494_113507286_113507639_113508540_113508581_113514457_113514655_113517540_113517625_113522929_113523042_113529220_113529265_113536795_113536919_113583449_113584428_113591332_113591398_113594429_113594532_113594918_113594981_113595598_113595766_113596767
transcript_197543.known	chr9	+	1503	5	FSM	ENSG00000138835.22	ENST00000620489.1	1503	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	10.8397416943394	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTGACCCTTTTTGTG	113593213	True	NA	9	True	AATAAA	-18	NA	113594128	113597729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_113594339_113594429_113594532_113594918_113594981_113595598_113595766_113596767
transcript_197545.known	chr9	+	1725	3	FSM	ENSG00000138835.22	ENST00000488620.5	1725	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCTCCTGAATGCTAATA	113564981	False	NA	NA	False	NA	NA	NA	113565075	113591794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_113565361_113583449_113584428_113591332
transcript_19755.nic	chr1	-	2415	13	ISM	ENSG00000143514.17	ENST00000343537.12	4632	18	-61	16559	-54	-278	5prime_fragment	FALSE	canonical	3	186	junction_4	19.8471590466299	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAAGAATTCCTCGGCCAC	-223845982	False	NA	NA	False	NA	NA	NA	223846008	223796451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_223796591_223798214_223798678_223799898_223800048_223800699_223800811_223802115_223802345_223802730_223802896_223803270_223803453_223804173_223804349_223806845_223806948_223810430_223810514_223814239_223814354_223821219_223821368_223845653
transcript_197553.known	chr9	+	3018	15	FSM	ENSG00000157657.15	ENST00000374126.10	9363	15	-27	6372	0	0	multi-exon	FALSE	canonical	1	2	junction_11	6.77932029583124	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACACAACACTGTCACAAA	113876229	False	NA	77	True	AAAAAG	-29	NA	113876281	114050221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_113876414_113969116_113969161_113988320_113988581_113998258_113998355_114001995_114002074_114002623_114002663_114007349_114007440_114008343_114008380_114008476_114008555_114016694_114016785_114028732_114028973_114032644_114032729_114036299_114036378_114047892_114047995_114048650
transcript_197557.nic	chr9	+	2969	15	NIC	ENSG00000157657.15	novel	9289	14	NA	NA	-54	-64	combination_of_known_junctions	FALSE	canonical	2	5	junction_8	5.34140545595426	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCTTTAAGACTTGACTT	113876212	False	NA	13	True	AATAAA	-21	NA	113876227	114050157	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_113876414_113969116_113969161_113988320_113988581_114001995_114002074_114002623_114002663_114007349_114007440_114008343_114008380_114008476_114008555_114016112_114016173_114016694_114016785_114028732_114028973_114032647_114032729_114036299_114036378_114047892_114047995_114048650
transcript_197567.known	chr9	+	9109	14	FSM	ENSG00000157657.15	ENST00000288466.11	9109	14	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	5.71823616616794	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGCAGCGTATGGTGTT	113876229	False	NA	9	True	AATAAA	-13	NA	113876281	114056591	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_113876414_113969116_113969161_113988320_113988581_114001995_114002074_114002623_114002663_114007349_114007440_114008343_114008380_114008476_114008555_114016112_114016173_114016694_114016785_114032647_114032729_114036299_114036378_114047892_114047995_114048650
transcript_197571.known	chr9	+	9289	14	FSM	ENSG00000157657.15	ENST00000615615.4	9289	14	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	5.15901004218684	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGCAGCGTATGGTGTT	113876229	False	NA	9	True	AATAAA	-13	NA	113876281	114056591	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_113876414_113969116_113969161_113988320_113988581_114001995_114002074_114002623_114002663_114007349_114007440_114008343_114008380_114008476_114008555_114016694_114016785_114028732_114028973_114032647_114032729_114036299_114036378_114047892_114047995_114048650
transcript_197579.nic	chr9	+	2669	13	NIC	ENSG00000157657.15	novel	9289	14	NA	NA	-54	-64	combination_of_known_junctions	TRUE	canonical	2	7	junction_8	5.58022301426107	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCTTTAAGACTTGACTT	113876212	False	NA	13	True	AATAAA	-21	NA	113876227	114050157	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_113876414_113969116_113969161_113988320_113988581_114001995_114002074_114002623_114002663_114007349_114007440_114008343_114008380_114008476_114008555_114016694_114016785_114032647_114032729_114036299_114036378_114047892_114047995_114048650
transcript_197580.nic	chr9	+	2733	13	NIC	ENSG00000157657.15	novel	9289	14	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_8	5.58022301426107	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACACAACACTGTCACAAA	113876212	False	NA	77	True	AAAAAG	-29	NA	113876227	114050221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_113876414_113969116_113969161_113988320_113988581_114001995_114002074_114002623_114002663_114007349_114007440_114008343_114008380_114008476_114008555_114016694_114016785_114032647_114032729_114036299_114036378_114047892_114047995_114048650
transcript_197591.known	chr9	-	1262	10	FSM	ENSG00000106927.12	ENST00000265132.8	1262	10	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_8	2.29868454061969	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTCCTCATTGTTCA	-114078194	False	NA	2	True	AATAAA	-24	NA	114078300	114060126	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_114060271_114060924_114061099_114061423_114061592_114062676_114062759_114069698_114069746_114072924_114073027_114074035_114074153_114074959_114075037_114076597_114076741_114078092
transcript_197612.known	chr9	-	7454	22	FSM	ENSG00000106948.17	ENST00000374088.8	7454	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	2.28868854108532	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAGGTTTAATTGA	-114387828	True	NA	NA	False	TATAAA	-28	NA	114387982	114334155	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_114337307_114341532_114341726_114342008_114342126_114343707_114343804_114345862_114346010_114346668_114346785_114347723_114347901_114350858_114351022_114355924_114356137_114356862_114356970_114357920_114358168_114359593_114359795_114359895_114360063_114361703_114361912_114362405_114362534_114364559_114364620_114367542_114367698_114368438_114368596_114374092_114374168_114376465_114377533_114381059_114381447_114387859
transcript_197615.known	chr9	-	2138	8	FSM	ENSG00000106948.17	ENST00000374079.8	2138	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1.76126114370542	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCGTGTCTCTGCTGTATG	-114348987	False	NA	-1	True	AAAAAG	-30	NA	114348999	114336127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_114337307_114341532_114341726_114342008_114342126_114343707_114343804_114345862_114346010_114346668_114346785_114347723_114347901_114348886
transcript_197620.known	chr9	-	4070	12	FSM	ENSG00000095397.16	ENST00000362057.4	4070	12	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_8	6.62576987574131	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTCAGCGTGCTGTGTGG	-114503990	True	NA	-6	True	AATAAA	-19	NA	114505473	114402079	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_114402937_114403216_114403340_114403895_114404078_114406354_114406893_114407946_114408019_114423313_114423524_114424333_114424547_114424987_114425025_114426210_114426414_114466266_114466393_114478552_114478772_114504183
transcript_197636.nic	chr9	-	3163	8	ISM	ENSG00000095397.16	ENST00000362057.4	4070	12	-55	5129	-55	-568	5prime_fragment	FALSE	canonical	3	57	junction_4	7.64252335719729	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATCCTCTTCATCGTGTC	-114504045	True	NA	-12	True	AATAAA	-16	NA	114505528	114407208	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_114408019_114423313_114423524_114424333_114424547_114424987_114425025_114426210_114426414_114466266_114466393_114478552_114478772_114504183
transcript_197646.known	chr9	-	1718	2	FSM	ENSG00000095397.16	ENST00000374057.3	1718	2	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTATTGATTGGCTT	-114503967	True	NA	NA	False	AATAAA	-18	NA	114505450	114478320	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_114478772_114504183
transcript_197647.known	chr9	+	1563	3	FSM	ENSG00000136888.8	ENST00000374050.4	1563	3	0	0	0	0	multi-exon	FALSE	canonical	3	2581	junction_2	20.5	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACTCAGGATTTTATTT	114561391	True	NA	19	True	AATACA	-32	NA	114587768	114598879	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_114587921_114592551_114592653_114597569
transcript_197649.known	chr9	+	1385	3	FSM	ENSG00000136888.8	ENST00000678234.1	1385	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	1287.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAGCACACATATCACATA	114561384	True	NA	-50	True	NA	NA	NA	114587761	114598496	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_114588119_114592551_114592653_114597569
transcript_197650.known	chr9	+	1136	3	FSM	ENSG00000136888.8	ENST00000677115.1	1136	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1311	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTTTTTTCCCTGTCT	114587622	True	NA	29	True	AGTAAA	-26	NA	114587705	114598384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_114587921_114592551_114592658_114597569
transcript_197651.known	chr9	+	978	2	FSM	ENSG00000136888.8	ENST00000677452.1	978	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCATTCTTTTTTTTTTCC	114561374	True	NA	23	True	AGTAAA	-20	NA	114587751	114598378	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_114587921_114597569
transcript_197653.known	chr9	+	4490	9	FSM	ENSG00000157693.15	ENST00000288502.9	4490	9	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_6	6.75347132962005	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGTCTCGCATATTGT	114611024	True	NA	5	True	AATAAA	-16	NA	114611290	114646422	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_114611565_114617117_114617302_114624349_114624460_114626898_114627007_114628100_114628251_114633767_114633879_114636989_114637071_114638543_114638727_114643133
transcript_197666.known	chr9	-	1757	9	FSM	ENSG00000148219.18	ENST00000341734.8	1757	9	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	26.4338797757726	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTGGGTGGTATTT	-116686220	True	NA	-5	True	ATTAAA	-18	NA	116687234	116425227	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_116425627_116425875_116426089_116440608_116440793_116442452_116442554_116487358_116487501_116618323_116618473_116620309_116620444_116651527_116651794_116687065
transcript_197668.nic	chr9	-	2664	8	NIC	ENSG00000148219.18	novel	1757	9	NA	NA	-24	634	intron_retention	FALSE	canonical	3	41	junction_7	14.5195153683108	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGAATTTGCTCCAGGAA	-116686244	True	NA	NA	False	NA	NA	NA	116687258	116424593	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_116426089_116440608_116440793_116442452_116442554_116487358_116487501_116618323_116618473_116620309_116620444_116651527_116651794_116687065
transcript_197669.nic	chr9	-	2264	8	NIC	ENSG00000148219.18	novel	1757	9	NA	NA	-258	0	intron_retention	FALSE	canonical	3	41	junction_7	14.5195153683108	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTGGGTGGTATTT	NA	False	NA	-5	True	ATTAAA	-18	NA	116687492	116425227	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_116426089_116440608_116440793_116442452_116442554_116487358_116487501_116618323_116618473_116620309_116620444_116651527_116651794_116687065
transcript_197672.known	chr9	-	2356	8	FSM	ENSG00000148219.18	ENST00000288520.9	2356	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	27.8347895663697	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTGGGTGGTATTT	-116686201	True	NA	-5	True	ATTAAA	-18	NA	116687215	116425227	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_116426089_116440608_116440793_116442452_116442554_116487358_116487501_116618323_116618473_116620309_116620444_116651527_116651794_116686696
transcript_197673.known	chr9	+	3715	2	FSM	ENSG00000119401.11	ENST00000450136.2	3715	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTTGTTCTTTTCAT	116686114	True	NA	3	True	ATTAAA	-15	NA	116687304	116701299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_116687382_116697661
transcript_197676.known	chr9	+	3688	2	FSM	ENSG00000119401.11	ENST00000373983.2	3688	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTTGTTCTTTTCATC	116686139	True	NA	4	True	ATTAAA	-16	NA	116687329	116701300	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_116687382_116697664
transcript_197678.known	chr9	-	3171	8	FSM	ENSG00000078725.13	ENST00000265922.8	3171	8	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_5	8.87095696929144	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTCTTTATGCTTAATT	-119368034	True	NA	-20	True	GATAAA	-27	NA	119369435	119166628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_119168225_119208718_119208942_119213918_119214156_119238654_119238761_119242046_119242217_119248959_119249151_119313137_119313406_119369055
transcript_197683.known	chr9	-	1641	6	FSM	ENSG00000078725.13	ENST00000373964.2	1641	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	10.1862652625975	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTAGTTGTATTGATTC	-119368024	True	NA	NA	False	AATAAA	-34	NA	119369425	119213619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_119214156_119238654_119238761_119242046_119242217_119248959_119249151_119313137_119313406_119369055
transcript_197684.known	chr9	-	6232	38	FSM	ENSG00000136861.19	ENST00000349780.9	6232	38	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_31	28.9636178926546	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGACGATTCTGTTGTTT	-120577407	True	NA	-7	True	ATTAAA	-18	NA	120580167	120388874	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_120389293_120389740_120389788_120394511_120394639_120400741_120400886_120402805_120403072_120404035_120404114_120407011_120407249_120408346_120408469_120409126_120409317_120411357_120411475_120415039_120415160_120419787_120419961_120422692_120422742_120437294_120437528_120439398_120439973_120443619_120443743_120447894_120448127_120453455_120453874_120458449_120458623_120460571_120460668_120467859_120467998_120470110_120470221_120471747_120471879_120477349_120477451_120487293_120487438_120491306_120491478_120518426_120518646_120524985_120525079_120527805_120527926_120528743_120528798_120529977_120530141_120536371_120536527_120539040_120539165_120545713_120545791_120550791_120550903_120568320_120568389_120571973_120572042_120579919
transcript_197689.known	chr9	-	5985	37	FSM	ENSG00000136861.19	ENST00000360190.8	5985	37	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	30.0941295903781	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGACGATTCTGTTGTT	-120577398	True	NA	-8	True	ATTAAA	-17	NA	120580158	120388875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_120389293_120389740_120389788_120394511_120394639_120400741_120400886_120402805_120403072_120404035_120404114_120408346_120408469_120409126_120409317_120411357_120411475_120415039_120415160_120419787_120419961_120422692_120422742_120437294_120437528_120439398_120439973_120443619_120443743_120447894_120448127_120453455_120453874_120458449_120458623_120460571_120460668_120467859_120467998_120470110_120470221_120471747_120471879_120477349_120477451_120487293_120487438_120491306_120491478_120518426_120518646_120524985_120525079_120527805_120527926_120528743_120528798_120529977_120530141_120536371_120536527_120539040_120539165_120545713_120545791_120550791_120550903_120568320_120568389_120571973_120572042_120579919
transcript_197697.known	chr9	-	970	11	FSM	ENSG00000136861.19	ENST00000472883.2	970	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	14.7583874457882	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGAAGGAAAGAGAAATTG	-120577301	True	NA	-14	True	NA	NA	NA	120580061	120527905	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_120527926_120528743_120528774_120528892_120528905_120529977_120530141_120536371_120536527_120539040_120539165_120545713_120545791_120550791_120550903_120568320_120568389_120571973_120572042_120579919
transcript_197698.nnic	chr9	-	1292	11	NIC	ENSG00000136861.19	novel	2090	13	NA	NA	-2	80	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	14.3836712976903	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAATCAAAGGAAAAAAAG	-120577412	True	NA	66	True	GATAAA	-26	NA	120580172	120527825	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_120527926_120528743_120528798_120529303_120529423_120529977_120530141_120536371_120536527_120539040_120539165_120545713_120545791_120550791_120550903_120568320_120568389_120571973_120572042_120579919
transcript_197700.known	chr9	-	5551	35	FSM	ENSG00000136861.19	ENST00000360822.8	5173	35	-11	-367	0	6	multi-exon	FALSE	canonical	1	1	junction_17	33.6190880242873	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGATTCTGTTGTTTTGTGTG	-120577410	True	NA	-1	True	ATTAAA	-24	NA	120580170	120388868	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_120389293_120389740_120389788_120394511_120394639_120400741_120400886_120402805_120403072_120404035_120404114_120407011_120407249_120408346_120408469_120409126_120409317_120411357_120411475_120415039_120415160_120419787_120419961_120422692_120422742_120437294_120437528_120439398_120439973_120443619_120443743_120447894_120448127_120467859_120467998_120470110_120470218_120471747_120471879_120477349_120477451_120487293_120487438_120491306_120491478_120518426_120518646_120524985_120525079_120527805_120527926_120528743_120528798_120529977_120530141_120536371_120536527_120539040_120539165_120545713_120545791_120550791_120550903_120568320_120568389_120571973_120572042_120579919
transcript_197705.known	chr9	-	6300	6	FSM	ENSG00000106780.9	ENST00000373930.4	6300	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	1.46969384566991	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGCCATGTATTTTG	-120714326	True	NA	NA	False	CATAAA	-18	NA	120714470	120600810	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_120605642_120607740_120608011_120612395_120612540_120622615_120622756_120659373_120659576_120713757
transcript_197706.nic	chr9	-	1870	8	ISM	ENSG00000119402.18	ENST00000684405.1	8325	9	-54	11114	-20	-1742	5prime_fragment	FALSE	canonical	3	39	junction_6	64.4043350043065	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTTTTTTTCTTTTGAA	-120785879	True	NA	-18	True	ATTAAA	-12	NA	120793436	120764173	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_120764848_120771347_120771518_120772753_120772841_120776092_120776227_120778350_120778546_120787768_120788187_120793148_120793258_120793353
transcript_197708.known	chr9	-	9142	8	FSM	ENSG00000119402.18	ENST00000608872.6	9142	8	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_7	43.3843760083357	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGCGTTGAAGTGTTCT	-120785859	True	NA	2	True	NA	NA	NA	120793416	120756973	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_120764848_120771347_120771518_120772753_120772841_120776092_120776227_120778350_120778546_120787768_120788279_120793148_120793258_120793353
transcript_197715.known	chr9	-	3381	10	FSM	ENSG00000095261.14	ENST00000210313.8	3381	10	0	0	0	0	multi-exon	FALSE	canonical	3	408	junction_4	67.1284010104682	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGTTGACTGCCTATTA	-120835406	True	NA	19	True	AATAAA	-35	NA	120842922	120816052	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_120818164_120820838_120820980_120821354_120821465_120824493_120824686_120826764_120826908_120829098_120829209_120831330_120831460_120831831_120831946_120833311_120833457_120842736
transcript_197725.nic	chr9	-	1371	5	ISM	ENSG00000095261.14	ENST00000210313.8	3381	10	-32	12391	-3	-1849	5prime_fragment	FALSE	canonical	3	436	junction_1	76.5996083540902	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATGAGCTTTTCAAAAT	-120835438	True	NA	NA	False	NA	NA	NA	120842954	120828443	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_120829209_120831330_120831460_120831831_120831946_120833311_120833457_120842736
transcript_197727.known	chr9	+	1970	4	FSM	ENSG00000226752.10	ENST00000640066.1	1970	4	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	14.7044966667418	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGACTGCCTGTATTGCT	120842180	True	NA	NA	False	AGTAAA	-29	NA	120843099	120852603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_120843440_120844992_120845197_120847293_120847354_120851237
transcript_197728.known	chr9	+	707	3	FSM	ENSG00000226752.10	ENST00000640391.2	2751	3	0	2044	0	-8	multi-exon	FALSE	canonical	2	2	junction_1	17	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATCTCTGGATTTCATGT	NA	False	NA	NA	False	NA	NA	NA	120842995	120851440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_120843440_120847293_120847354_120851237
transcript_197730.known	chr9	-	567	3	FSM	ENSG00000095261.14	ENST00000471789.1	567	3	0	0	0	0	multi-exon	FALSE	canonical	3	565	junction_1	22	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTAGTAAACCCCTTTC	-120835366	True	NA	NA	False	AATAAA	-14	NA	120842882	120831669	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_120831946_120833311_120833457_120842736
transcript_197731.known	chr9	+	884	2	FSM	ENSG00000226752.10	ENST00000458394.2	2154	2	1225	45	-413	-45	multi-exon	FALSE	canonical	3	12	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGGAAATTTTGTT	120844279	False	NA	NA	False	AAAAAG	-23	NA	120844299	120845276	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_120844900_120844992
transcript_197734.known	chr9	-	4149	15	FSM	ENSG00000119403.15	ENST00000373896.8	4149	15	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_3	36.5438651709511	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCTTCCCTATAGTGAA	-120875961	True	NA	37	True	TTTAAA	-20	NA	120877188	120855650	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_120858287_120860089_120860186_120861088_120861175_120861917_120862006_120862587_120862750_120864048_120864117_120865709_120865831_120866027_120866097_120866869_120866966_120869181_120869331_120869844_120869946_120870442_120870539_120873978_120874061_120874555_120874757_120877090
transcript_197739.known	chr9	-	3525	10	FSM	ENSG00000119403.15	ENST00000419155.5	3525	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	7.00440778332199	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTCTTCCCTATAGTGA	-120868900	False	NA	36	True	TTTAAA	-19	NA	120868911	120855651	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_120858287_120860089_120860186_120861088_120861175_120861917_120862006_120862587_120862750_120864048_120864117_120865709_120865831_120866027_120866097_120866869_120866966_120868807
transcript_197742.known	chr9	-	1092	9	FSM	ENSG00000119403.15	ENST00000487555.5	1092	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	9.25253343684853	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAGGGGTCCTGAAAACC	-120868833	False	1227	NA	False	NA	NA	NA	120868844	120857929	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_120858287_120860089_120860186_120861088_120861175_120862587_120862750_120864048_120864117_120865709_120865831_120866027_120866097_120866869_120866966_120868807
transcript_197744.known	chr9	-	836	5	FSM	ENSG00000119403.15	ENST00000312189.10	836	5	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_2	11.2333209693305	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATGTAAATACATGTTGG	-120875961	True	NA	-34	True	AATAAA	-27	NA	120877188	120869586	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_120869946_120870442_120870539_120873978_120874061_120874555_120874757_120877090
transcript_197745.known	chr9	-	4303	9	FSM	ENSG00000056558.11	ENST00000540010.1	4303	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	2.6809513236909	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGATGTGACATTGCAT	-120929007	True	NA	-2	True	NA	NA	NA	120929173	120902392	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_120905239_120909229_120909379_120911335_120911514_120913327_120913739_120914234_120914301_120923704_120923793_120925935_120926302_120926549_120926689_120929113
transcript_197746.known	chr9	-	4351	8	FSM	ENSG00000056558.11	ENST00000373887.8	4351	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	2.43276948084663	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGATGTGACATTGCAT	-120926630	False	NA	-2	True	NA	NA	NA	120926796	120902392	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_120905239_120909229_120909379_120911335_120911514_120913327_120913739_120914234_120914301_120923704_120923793_120925935_120926302_120926549
transcript_197756.known	chr9	+	3372	18	ISM	ENSG00000119397.19	ENST00000373850.6	5911	33	8	19496	8	199	intron_retention	FALSE	canonical	3	14	junction_1	9.27846783676723	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAATAGACACCTTGAAAAA	121121421	True	NA	NA	False	NA	NA	NA	121121800	121158114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_121121952_121123930_121124085_121125715_121125937_121135805_121135983_121138544_121138680_121140640_121140787_121141380_121141589_121142090_121142271_121143902_121144083_121144842_121144960_121145243_121145386_121146107_121146257_121148671_121148862_121150169_121150484_121152484_121152694_121154720_121154914_121157469_121157601_121157739
transcript_197760.known	chr9	+	2027	11	ISM	ENSG00000119397.19	ENST00000373847.6	5449	32	-209	42934	93	4847	5prime_fragment	FALSE	canonical	3	5	junction_1	3.0347981810987	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTACATATTACATGTCTC	121074729	False	NA	NA	False	AGTAAA	-23	NA	121074752	121118571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_121075068_121088295_121088544_121090274_121090406_121094887_121095019_121096421_121096564_121098385_121098573_121107801_121107996_121112458_121112579_121113501_121113725_121115090_121115201_121118345
transcript_197767.known	chr9	+	2702	19	FSM	ENSG00000148180.21	ENST00000449733.7	2702	19	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	96.7282849590083	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTAGTGTGGCTCGTTTC	121266756	True	NA	16	True	AATAAA	-18	NA	121268167	121332843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_121268220_121281469_121281563_121282438_121282551_121301962_121302168_121302910_121303066_121310683_121310846_121312338_121312489_121313933_121314024_121317085_121317219_121318405_121318495_121318664_121318881_121321267_121321402_121324553_121324645_121326511_121326683_121327307_121327483_121328890_121329016_121329237_121329316_121331387_121331449_121332433
transcript_197773.known	chr9	+	2664	19	FSM	ENSG00000148180.21	ENST00000373808.8	2664	19	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	96.43946799757	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAGTATCCAAAAATAGCC	NA	False	NA	23	True	NA	NA	NA	121268059	121332738	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_121268220_121281469_121281563_121300055_121300127_121301962_121302168_121302910_121303066_121310683_121310846_121312338_121312489_121313933_121314024_121317085_121317219_121318405_121318495_121318664_121318881_121321267_121321402_121324553_121324645_121326511_121326683_121327307_121327483_121328890_121329016_121329237_121329316_121331387_121331449_121332433
transcript_197780.known	chr9	+	2595	18	FSM	ENSG00000148180.21	ENST00000432226.7	2595	18	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	42.3457510236598	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTAGTGTGGCTCGTTT	121266750	True	NA	15	True	AATAAA	-17	NA	121268161	121332842	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_121268220_121281469_121281563_121301962_121302168_121302910_121303066_121310683_121310846_121312338_121312489_121313933_121314024_121317085_121317219_121318405_121318495_121318664_121318881_121321267_121321402_121324553_121324645_121326511_121326683_121327307_121327483_121328890_121329016_121329237_121329316_121331387_121331449_121332433
transcript_197789.nic	chr9	+	2558	17	NIC	ENSG00000148180.21	novel	2595	18	NA	NA	46	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	72.5187206433622	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTAGTGTGGCTCGTTT	121266694	True	NA	15	True	AATAAA	-17	NA	121268105	121332842	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_121268220_121301962_121302168_121302910_121303066_121310683_121310846_121312338_121312489_121313933_121314024_121317085_121317219_121318405_121318495_121318664_121318881_121321267_121321402_121324553_121324645_121326511_121326683_121327307_121327483_121328890_121329016_121329237_121329316_121331387_121331449_121332433
transcript_19779.known	chr1	-	2046	1	FSM	ENSG00000272645.4	ENST00000608760.3	2046	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTATTTGGAGTGAGTTT	NA	False	NA	-5	True	NA	NA	NA	223953439	223951393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_223951400_223953400
transcript_197790.known	chr9	+	2657	17	FSM	ENSG00000148180.21	ENST00000373818.8	2657	17	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	74.2901564391272	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTAGTGTGGCTCGTTT	121299751	True	NA	15	True	AATAAA	-17	NA	121299792	121332842	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_121300006_121301962_121302168_121302910_121303066_121310683_121310846_121312338_121312489_121313933_121314024_121317085_121317219_121318405_121318495_121318664_121318881_121321267_121321402_121324553_121324645_121326511_121326683_121327307_121327483_121328890_121329016_121329237_121329316_121331387_121331449_121332433
transcript_197795.known	chr9	-	4149	8	FSM	ENSG00000119396.11	ENST00000373840.9	4149	8	0	0	0	0	multi-exon	FALSE	canonical	3	396	junction_5	38.386859996725	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGCACTGTGCTGCTCT	-121198395	True	NA	NA	False	AATAAA	-19	NA	121201869	121178132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_121181574_121182929_121182961_121183310_121183399_121186952_121187020_121190553_121190732_121192170_121192225_121193360_121193420_121201638
transcript_197798.known	chr9	-	3145	7	FSM	ENSG00000148175.13	ENST00000286713.7	3145	7	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_5	11.8836956466506	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCTGGTTGGCTTCTTC	-121366642	True	NA	75	True	NA	NA	NA	121370250	121338986	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_121341409_121348014_121348150_121349119_121349324_121353219_121353303_121354600_121354674_121356052_121356157_121370126
transcript_197803.known	chr9	+	6784	16	FSM	ENSG00000136848.18	ENST00000408936.7	6784	16	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	20.0780698496865	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGACTCGTGTCTCCATT	121650655	True	NA	10	True	ATTAAA	-21	NA	121651593	121785530	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_121651900_121678677_121678782_121699324_121699459_121757012_121757167_121758897_121758997_121759884_121760440_121763504_121763650_121763734_121763880_121766493_121766731_121768431_121768634_121770545_121770725_121772606_121773496_121774259_121774413_121776197_121776392_121781463_121781552_121782330
transcript_197807.nnic	chr9	+	973	6	NNC	ENSG00000136848.18	novel	5514	17	NA	NA	1244	2945	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	17.0575496481763	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAAGAAGGAGCGCA	121598838	True	NA	NA	False	NA	NA	NA	121599511	121760111	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_121599767_121678677_121678782_121699324_121699459_121757012_121757167_121758897_121758997_121759884
transcript_197809.known	chr9	-	1038	3	FSM	ENSG00000175764.17	ENST00000487468.5	1038	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGTTTTACATTCATTC	-122092683	False	NA	NA	False	ATTAAA	-19	NA	122092766	121988909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_121989771_122039271_122039369_122092686
transcript_197810.known	chr9	-	804	4	FSM	ENSG00000119421.7	ENST00000373768.4	804	4	0	0	0	0	multi-exon	FALSE	canonical	3	1511	junction_2	52.6181210864343	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTGTATTTTATTATGTT	-122141685	True	NA	-12	True	ATTAAA	-15	NA	122159779	122144057	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_122144379_122148111_122148278_122152244_122152409_122159626
transcript_197813.nnic	chr9	-	642	3	NIC	ENSG00000119421.7	novel	804	4	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	100	junction_2	766.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTGTATTTTATTATGTT	-122141687	True	NA	-12	True	ATTAAA	-15	NA	122159781	122144057	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_122144379_122148111_122148278_122159626
transcript_197814.known	chr9	-	666	2	FSM	ENSG00000106852.16	ENST00000464484.3	666	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCGATGCCAACGGCCT	-122213898	False	NA	NA	False	NA	NA	NA	122213922	122204431	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_122204781_122213605
transcript_197819.known	chr9	+	1186	9	FSM	ENSG00000148187.18	ENST00000470366.5	1186	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	64.2470816457837	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGGACTTCTCTCCCTCC	122261743	True	NA	NA	False	NA	NA	NA	122264925	122322678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_122264939_122270863_122271076_122280442_122280599_122285168_122285288_122285779_122285947_122286038_122286167_122291748_122291841_122313226_122313387_122322539
transcript_19783.known	chr1	+	5427	5	FSM	ENSG00000143756.12	ENST00000366862.10	5427	5	0	0	0	0	multi-exon	TRUE	canonical	3	139	junction_4	16.8077363139716	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTGTTTTCTTTGTATT	224109320	True	NA	5	True	AATAAA	-17	NA	224114110	224162047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_224114397_224130471_224130582_224134073_224134213_224153141_224153338_224157351
transcript_197830.known	chr9	+	9594	7	FSM	ENSG00000148187.18	ENST00000344641.8	9594	7	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	15.2388392675499	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATAAGTTGGTGATTCTTT	122261699	True	NA	NA	False	ATTAAA	-21	NA	122264881	122331337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_122264939_122270863_122271076_122280442_122280599_122285168_122285288_122291748_122291841_122313226_122313387_122322539
transcript_197832.known	chr9	-	889	7	FSM	ENSG00000119446.14	ENST00000483428.1	889	7	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_5	168.482442210853	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATGTTTTTGGATGTTCT	-122261814	True	NA	-119	True	NA	NA	NA	122264794	122241757	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_122242044_122245255_122245342_122247517_122247605_122251846_122251974_122254273_122254368_122261379_122261509_122264714
transcript_197835.known	chr9	-	4977	6	FSM	ENSG00000119446.14	ENST00000417201.4	4977	6	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_3	22.6503863101714	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTTTCTTAGTCAATGT	-122261860	True	NA	NA	False	AATAAA	-32	NA	122264840	122237621	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_122242044_122245255_122245342_122247517_122247605_122251846_122251974_122261379_122261509_122264714
transcript_197840.nic	chr9	+	1695	2	ISM	ENSG00000148187.18	ENST00000441707.5	858	5	-11	18194	-6	-18194	5prime_fragment	FALSE	canonical	3	15	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGCCGGCGCAGTGGCT	122261693	True	NA	NA	False	AAAAAG	-9	NA	122264875	122267093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_122264939_122265461
transcript_197841.known	chr9	+	5020	11	FSM	ENSG00000095303.17	ENST00000362012.7	5020	11	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	1.0770329614269	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGGTATTTGTGGGGG	122370962	True	NA	2	True	AATAAA	-15	NA	122371023	122395703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_122371092_122371185_122371273_122377898_122378016_122378432_122378574_122378774_122378919_122381370_122381553_122381663_122381748_122383508_122383756_122386445_122386733_122390197_122390346_122392188
transcript_197842.known	chr9	+	2541	11	FSM	ENSG00000095303.17	ENST00000647067.1	2541	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	1.48660687473185	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCAGCTGTTTCTCATGA	122370963	True	NA	NA	False	NA	NA	NA	122371024	122393254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_122371092_122371185_122371273_122377927_122378016_122378432_122378574_122378774_122378919_122381370_122381553_122381663_122381748_122383508_122383756_122386445_122386733_122390197_122390346_122392188
transcript_197843.known	chr9	-	3017	4	FSM	ENSG00000136940.14	ENST00000259467.9	3017	4	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_1	26.5120517668642	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTTTCACCATGTTGGCC	-122824413	True	NA	NA	False	NA	NA	NA	122828588	122818096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_122820637_122823015_122823198_122826615_122826793_122828470
transcript_197851.known	chr9	-	3623	18	FSM	ENSG00000056586.16	ENST00000423239.6	3623	18	0	0	0	0	multi-exon	TRUE	canonical	3	56	junction_2	21.6834732084282	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAATCTTGCTCTATCG	-122902706	True	NA	50	True	NA	NA	NA	122905341	122853744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_122854087_122854184_122854267_122854530_122854616_122855183_122855398_122855731_122855879_122857922_122858094_122858668_122859103_122859916_122860132_122865348_122865658_122877470_122877584_122879754_122879874_122879992_122880126_122880593_122880795_122883203_122883380_122890311_122890546_122892908_122893027_122897278_122897577_122905109
transcript_197857.known	chr9	-	3081	10	FSM	ENSG00000056586.16	ENST00000335387.9	3081	10	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	39.4799527186478	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACAGTATTATAATTGTTT	-122904229	False	NA	NA	False	AATAAA	-40	NA	122905215	122873785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_122875369_122877470_122877584_122879754_122879874_122879992_122880126_122880593_122880795_122883203_122883380_122890311_122890546_122892908_122893027_122897278_122897577_122905109
transcript_197863.nic	chr9	-	1184	4	ISM	ENSG00000056586.16	ENST00000335387.9	3081	10	-287	16385	-143	0	5prime_fragment	FALSE	canonical	3	110	junction_2	13.9124245031395	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTGTTATTGCTGTTT	-122904516	False	986	-11	True	ATTAAA	-18	NA	122905502	122890170	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_122890546_122892908_122893027_122897278_122897577_122905109
transcript_197864.known	chr9	-	4099	2	FSM	ENSG00000186130.5	ENST00000373659.4	4099	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAATGTGTTTTGTCTTC	-122912337	True	NA	-4	True	AATAAA	-18	NA	122913323	122908055	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_122912082_122913250
transcript_197865.known	chr9	-	4455	2	FSM	ENSG00000171448.9	ENST00000373656.4	4455	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGTCATTGGTTAT	-122930890	True	NA	NA	False	AATAAA	-16	NA	122931512	122915565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_122919945_122931436
transcript_197867.known	chr9	+	4986	26	FSM	ENSG00000011454.18	ENST00000373647.9	4986	26	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	18.9937252796812	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCATTGCTTTGTAAAAAC	122934516	True	NA	13	True	ATTAAA	-19	NA	122941019	123104866	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_122941094_122957010_122957210_122984484_122984720_122986214_122986420_122989296_122989472_122990055_122990214_122996040_122996152_122996538_122996606_122997258_122997362_122998596_122998767_123010353_123010529_123015542_123015637_123020308_123020460_123065347_123065462_123070349_123070425_123073551_123073678_123074284_123074429_123076244_123076287_123076633_123076763_123089757_123089851_123090274_123090386_123097740_123097846_123098714_123098799_123099477_123099550_123101565_123101764_123103090
transcript_197869.nic	chr9	+	2939	23	ISM	ENSG00000011454.18	ENST00000373647.9	4986	26	-27	6096	-27	1017	5prime_fragment	FALSE	canonical	3	164	junction_1	19.4490752717352	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTCTATCATTGGTGACT	122940727	False	NA	NA	False	ATTAAA	-6	NA	122940992	123098770	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_122941094_122957010_122957210_122984484_122984720_122986214_122986420_122989296_122989472_122990055_122990214_122996040_122996152_122996538_122996606_122997258_122997362_122998596_122998767_123010353_123010529_123015542_123015637_123020308_123020460_123065347_123065462_123070349_123070425_123073551_123073678_123074284_123074429_123076244_123076287_123076633_123076763_123089757_123089851_123090274_123090386_123097740_123097846_123098714
transcript_19787.known	chr1	+	628	3	FSM	ENSG00000143756.12	ENST00000483773.1	628	3	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	8.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCATTTGTATGATCTTT	224109380	True	NA	NA	False	TATAAA	-4	NA	224114170	224134365	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_224114397_224130471_224130582_224134073
transcript_197871.nic	chr9	+	2547	19	ISM	ENSG00000011454.18	ENST00000373647.9	4986	26	-27	28131	-27	-264	5prime_fragment	FALSE	canonical	3	164	junction_1	18.5246749025972	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATGGAATTAGCCTGCAA	122940727	False	NA	NA	False	AAGAAA	-12	NA	122940992	123076735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_122941094_122957010_122957210_122984484_122984720_122986214_122986420_122989296_122989472_122990055_122990214_122996040_122996152_122996538_122996606_122997258_122997362_122998596_122998767_123010353_123010529_123015542_123015637_123020308_123020460_123065347_123065462_123070349_123070425_123073551_123073678_123074284_123074429_123076244_123076287_123076633
transcript_197881.known	chr9	+	2186	5	FSM	ENSG00000011454.18	ENST00000317419.7	2186	5	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	26.7114207783862	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	122934516	True	NA	NA	False	NA	NA	NA	122941019	122990769	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_122941094_122957010_122957210_122984484_122984720_122986214_122986420_122989296
transcript_197883.known	chr9	-	6451	19	FSM	ENSG00000165209.19	ENST00000348403.10	6451	19	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_18	182.612970277525	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAACAAAATATTATGGT	-123257308	True	NA	NA	False	AATAGA	-20	NA	123268586	123121616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_123125674_123128213_123128259_123132844_123132969_123136040_123136182_123136380_123136516_123139528_123139688_123146854_123147055_123147777_123147871_123158011_123158124_123158331_123158430_123159095_123159208_123160366_123160463_123160976_123161069_123169901_123170047_123173676_123173843_123179006_123179228_123184131_123184299_123236829_123236967_123268435
transcript_19789.known	chr1	+	2032	3	FSM	ENSG00000143753.13	ENST00000323699.9	2032	3	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_2	7	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTTTCAGGTGTGTTG	224181336	True	NA	19	True	AATAAA	-28	NA	224183239	224193441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_224183419_224189576_224190320_224192331
transcript_197890.nic	chr9	-	3239	18	NIC	ENSG00000165209.19	novel	6451	19	NA	NA	-21	326	combination_of_known_junctions	FALSE	canonical	3	539	junction_15	57.109013705078	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACCCTCTCTTGTTCTTGT	-123257329	True	NA	-8	True	AATAAA	-13	NA	123268607	123124712	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_123125674_123128213_123128259_123132844_123132969_123136040_123136182_123136380_123136516_123139528_123139688_123146854_123147055_123147777_123147871_123158011_123158124_123158331_123158430_123159095_123159208_123160366_123160463_123160976_123161069_123169901_123170047_123173676_123173843_123179006_123179228_123184131_123184299_123268435
transcript_197892.nic	chr9	-	2732	18	NIC	ENSG00000165209.19	novel	6451	19	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	539	junction_15	57.109013705078	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGAGTACTGCCTGGTTC	-123257329	True	NA	-7	True	AATAAA	-15	NA	123268607	123125219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_123125674_123128213_123128259_123132844_123132969_123136040_123136182_123136380_123136516_123139528_123139688_123146854_123147055_123147777_123147871_123158011_123158124_123158331_123158430_123159095_123159208_123160366_123160463_123160976_123161069_123169901_123170047_123173676_123173843_123179006_123179228_123184131_123184299_123268435
transcript_197893.nic	chr9	-	2545	18	NIC	ENSG00000165209.19	novel	6451	19	NA	NA	-21	-187	combination_of_known_junctions	FALSE	canonical	3	539	junction_15	57.109013705078	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTTCTGTGAAAACGGTA	-123257329	True	NA	24	True	AAAAAG	-4	NA	123268607	123125406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_123125674_123128213_123128259_123132844_123132969_123136040_123136182_123136380_123136516_123139528_123139688_123146854_123147055_123147777_123147871_123158011_123158124_123158331_123158430_123159095_123159208_123160366_123160463_123160976_123161069_123169901_123170047_123173676_123173843_123179006_123179228_123184131_123184299_123268435
transcript_197899.nnic	chr9	-	2386	17	NIC	ENSG00000165209.19	novel	6451	19	NA	NA	-21	-187	combination_of_known_splicesites	FALSE	canonical	3	91	junction_5	138.151849765937	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTTCTGTGAAAACGGTA	-123257329	True	NA	24	True	AAAAAG	-4	NA	123268607	123125406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_123125674_123128213_123128259_123132844_123132969_123136040_123136182_123136380_123136516_123146854_123147055_123147777_123147871_123158011_123158124_123158331_123158430_123159095_123159208_123160366_123160463_123160976_123161069_123169901_123170047_123173676_123173843_123179006_123179228_123184131_123184299_123268435
transcript_197906.nic	chr9	-	2093	15	NIC	ENSG00000165209.19	novel	6451	19	NA	NA	-21	-250	combination_of_known_junctions	FALSE	canonical	3	539	junction_12	51.3940856598921	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATTATCCCTCAGGTAT	-123257329	True	NA	NA	False	AAGAAA	-3	NA	123268607	123136056	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_123136182_123136380_123136516_123139528_123139688_123146854_123147055_123147777_123147871_123158011_123158124_123158331_123158430_123159095_123159208_123160366_123160463_123160976_123161069_123169901_123170047_123173676_123173843_123179006_123179228_123184131_123184299_123268435
transcript_197910.nic	chr9	-	1743	13	NIC	ENSG00000165209.19	novel	6451	19	NA	NA	-21	-3812	combination_of_known_junctions	FALSE	canonical	3	539	junction_10	51.1193456530891	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAGATAATGAAAGTAAAAA	-123257329	True	NA	NA	False	NA	NA	NA	123268607	123139618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_123139688_123146854_123147055_123147777_123147871_123158011_123158124_123158331_123158430_123159095_123159208_123160366_123160463_123160976_123161069_123169901_123170047_123173676_123173843_123179006_123179228_123184131_123184299_123268435
transcript_197913.nic	chr9	-	291	2	ISM	ENSG00000165209.19	ENST00000407982.6	2751	19	-43	58960	-21	-5173	5prime_fragment	FALSE	canonical	3	539	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGGGAAAGGATCGGAAAA	-123257329	True	NA	-39	True	AAGAAA	-1	NA	123268607	123184179	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_123184299_123268435
transcript_197914.known	chr9	-	5010	22	FSM	ENSG00000119522.17	ENST00000373624.6	5010	22	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	14.0359111824309	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCATCCCCGTGTCCTTG	-123930070	False	NA	-6	True	AATAAA	-19	NA	123930107	123379653	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_123382626_123383654_123383914_123403401_123403491_123440359_123440492_123450692_123450750_123452275_123452348_123454738_123454780_123457347_123457436_123457792_123457898_123557569_123557696_123583168_123583271_123609435_123609482_123630375_123630477_123652012_123652124_123667025_123667080_123671290_123671372_123676719_123676790_123757702_123757823_123769513_123769564_123792586_123792631_123878950_123879022_123929888
transcript_197919.known	chr9	-	3612	21	FSM	ENSG00000119522.17	ENST00000373620.7	3612	21	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	18.8586187193018	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGGCTACTTCCATTAC	-123928875	True	NA	NA	False	ACTAAA	-13	NA	123930126	123400098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_123401913_123403401_123403491_123440359_123440492_123450692_123450750_123452275_123452348_123454738_123454780_123457347_123457436_123457792_123457898_123557569_123557696_123583168_123583271_123609435_123609482_123630375_123630477_123652012_123652124_123667025_123667080_123671290_123671372_123676719_123676790_123757702_123757823_123769513_123769564_123792586_123792631_123878950_123879022_123929888
transcript_197928.known	chr9	+	3619	11	FSM	ENSG00000119408.17	ENST00000373600.7	3619	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	117.365412281472	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACAGAACCTATCTGTCC	124254791	True	NA	NA	False	NA	NA	NA	124257962	124353307	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_124258086_124292848_124293014_124301935_124302055_124312508_124312650_124313922_124313986_124321458_124321570_124326329_124326439_124327337_124327446_124339570_124339666_124347708_124347823_124350836
transcript_197930.nnic	chr9	+	1401	10	NNC	ENSG00000119408.17	novel	3468	10	NA	NA	-41	1893	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_9	92.6102946041457	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTCACCTGAATCTGGTT	124254736	True	NA	89	True	CATAAA	-18	NA	124257907	124349690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_124258086_124301935_124302055_124312508_124312650_124313922_124313986_124321458_124321570_124326329_124326439_124327337_124327446_124339570_124339666_124347708_124347823_124349327
transcript_197931.known	chr9	+	3468	10	FSM	ENSG00000119408.17	ENST00000320246.10	3468	10	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_1	21.4049723079983	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACAGAACCTATCTGTCC	124254777	True	NA	NA	False	NA	NA	NA	124257948	124353307	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_124258086_124301935_124302055_124312508_124312650_124313922_124313986_124321458_124321570_124326329_124326439_124327337_124327446_124339570_124339666_124347708_124347823_124350836
transcript_197938.known	chr9	+	2573	10	FSM	ENSG00000119408.17	ENST00000545174.5	2573	10	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	92.252070136363	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGCTTTGGAGATTTT	124255079	False	NA	28	True	AATAAA	-41	NA	124258250	124352438	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_124258362_124301935_124302055_124312508_124312650_124313922_124313986_124321458_124321570_124326329_124326439_124327337_124327446_124339570_124339666_124347708_124347823_124350836
transcript_197945.known	chr9	-	984	8	FSM	ENSG00000136930.13	ENST00000259457.8	984	8	0	0	0	0	multi-exon	FALSE	canonical	3	1889	junction_2	94.3616577269581	1059	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGGCACTGTGTGGTG	-124392443	True	NA	-4	True	AATAAA	-27	NA	124415442	124353464	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_124353710_124356763_124356916_124384597_124384657_124405316_124405433_124412351_124412493_124413907_124414006_124414841_124414936_124415363
transcript_197957.known	chr9	-	1846	10	FSM	ENSG00000148200.17	ENST00000344523.8	1846	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	16.9756543174681	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGCCAATGCATTTTCTT	-124751172	True	NA	NA	False	NA	NA	NA	124771287	124522466	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_124522794_124524720_124524874_124526778_124526901_124535877_124536133_124538091_124538317_124540032_124540188_124543801_124543858_124554327_124554571_124733307_124733350_124771019
transcript_197961.nic	chr9	-	2788	9	ISM	ENSG00000148200.17	ENST00000487099.7	7065	10	-40	6244	-40	-1052	5prime_fragment	FALSE	canonical	3	35	junction_4	11.9262053898128	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGTTTGAGTTGCACCT	-124751236	True	NA	NA	False	NA	NA	NA	124771351	124523518	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_124524874_124526778_124526901_124535877_124536133_124538091_124538320_124540032_124540188_124543801_124543858_124554327_124554571_124733307_124733350_124771019
transcript_197965.nic	chr9	-	673	4	ISM	ENSG00000148200.17	ENST00000344523.8	1846	10	-64	21335	-40	-5710	5prime_fragment	FALSE	canonical	3	49	junction_1	11.1455023315337	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTCTAGACCTCAGTC	-124751236	True	NA	NA	False	NA	NA	NA	124771351	124543801	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_124543858_124554327_124554571_124733307_124733350_124771019
transcript_197966.nnic	chr9	-	1301	3	NNC	ENSG00000148200.17	novel	7065	10	NA	NA	-40	-192454	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	38	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTACTTACTGGCAGGGCA	-124751236	True	NA	NA	False	AAAAAG	-10	NA	124771351	124730545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_124731129_124732963_124733350_124771019
transcript_197969.nic	chr9	-	984	2	ISM	ENSG00000148200.17	ENST00000344523.8	1846	10	-64	210231	-40	-194606	5prime_fragment	FALSE	canonical	3	76	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTACTTGCATTTATGCA	-124751236	True	NA	NA	False	NA	NA	NA	124771351	124732697	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_124733350_124771019
transcript_19797.known	chr1	-	3003	24	FSM	ENSG00000143748.18	ENST00000482491.5	3003	24	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_15	68.9591259994001	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACAGAAAAGTTACAGAGA	-224326003	True	NA	-2	True	AATAAA	-26	NA	224330189	224227336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_224227671_224231225_224231297_224233200_224233290_224236505_224236583_224250211_224250319_224268033_224268134_224275338_224275459_224281122_224281186_224286025_224286131_224287774_224287994_224289483_224289734_224294266_224294412_224296500_224296619_224300561_224300664_224301690_224301772_224303722_224303858_224304735_224304813_224305033_224305167_224307990_224308264_224311799_224311858_224317693_224317794_224317877_224317931_224326390_224326465_224330070
transcript_197972.known	chr9	+	6567	8	FSM	ENSG00000185585.20	ENST00000373580.8	6567	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	2.65729646253404	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGGACTAAATGCTGTGG	124776659	True	NA	NA	False	AATAAA	-27	NA	124777132	124814882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_124777361_124786974_124787239_124795023_124795132_124799284_124799492_124801413_124801664_124804093_124804343_124807780_124807967_124809807
transcript_197973.known	chr9	-	493	5	FSM	ENSG00000136942.15	ENST00000373570.8	493	5	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	13803.3373930908	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTCCTGGCACTTCC	-124656704	True	NA	-14	True	AATAAA	-20	NA	124861915	124857879	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_124858068_124858457_124858538_124860182_124860265_124861418_124861556_124861909
transcript_197976.known	chr9	-	452	4	FSM	ENSG00000136942.15	ENST00000348462.6	452	4	0	0	0	0	multi-exon	FALSE	canonical	3	23069	junction_3	3348.45300930976	5181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTGTTTCCTGGCACT	-124656746	True	NA	-17	True	AATAAA	-17	NA	124861957	124857882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_124858068_124860182_124860265_124861418_124861556_124861909
transcript_197981.known	chr9	-	785	3	FSM	ENSG00000136942.15	ENST00000487431.1	785	3	0	0	0	0	multi-exon	FALSE	canonical	3	28114	junction_1	1539	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTGTTTCCTGGCACT	-124656725	True	NA	-17	True	AATAAA	-17	NA	124861936	124857882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_124858068_124860182_124860265_124861418
transcript_197982.known	chr9	+	1325	4	FSM	ENSG00000136950.13	ENST00000259477.6	1325	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	589.792242140306	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATTTAATAATTGATCTA	124856115	True	NA	NA	False	AATAAA	-7	NA	124869204	124877717	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_124869440_124873691_124873765_124874974_124875152_124876877
transcript_197988.known	chr9	-	1808	18	FSM	ENSG00000173611.18	ENST00000477186.5	1808	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	13.7842997796488	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAGTTTTCATTTTCCA	-125141659	True	NA	NA	False	ATTAAA	-19	NA	125143487	124952787	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_124952954_124971369_124971471_124971670_124971763_124976113_124976187_124994933_124995016_124999890_124999991_125001964_125002044_125003113_125003216_125003468_125003571_125018798_125018952_125019106_125019206_125020672_125020770_125026811_125026911_125028391_125028479_125029643_125029740_125055875_125056008_125142632_125142678_125143384
transcript_197989.known	chr9	-	12111	18	FSM	ENSG00000173611.18	ENST00000336505.11	12111	18	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	12.2352941176471	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGGTACTTTTTCGGT	-125141700	True	NA	0	True	AATAAA	-16	NA	125143528	124942607	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_124952954_124971369_124971471_124971670_124971845_124976113_124976187_124994933_124995016_124999890_124999991_125001964_125002044_125003113_125003216_125003468_125003571_125018798_125018952_125019106_125019206_125020672_125020770_125026811_125026911_125028391_125028479_125029643_125029740_125055875_125056008_125142632_125142678_125143384
transcript_197992.nnic	chr9	-	734	4	NNC	ENSG00000173611.18	novel	546	2	NA	NA	-22	-52294	at_least_one_novel_splicesite	FALSE	canonical	2	28	junction_1	15.2534149181967	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCTTGTACTTTTGGTAT	-125141722	True	NA	-9	True	AATAAA	-26	NA	125143550	125052204	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_125052596_125055875_125056008_125142632_125142678_125143384
transcript_197993.known	chr9	-	546	2	FSM	ENSG00000173611.18	ENST00000468569.1	546	2	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCAGGAGGATCATTTGA	-125141678	True	NA	NA	False	NA	NA	NA	125143506	125142253	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_125142678_125143384
transcript_197994.known	chr9	-	4877	23	FSM	ENSG00000136935.14	ENST00000373555.9	4877	23	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_22	8.63492811035937	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCAAGGGCTAGAGAATGT	-124940021	True	NA	75	True	ATTAAA	-41	NA	124941083	124878274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_124880611_124881170_124881258_124881783_124881955_124882509_124882570_124888252_124888397_124889142_124889304_124889433_124889537_124890388_124890479_124898548_124898645_124899328_124899479_124900451_124900548_124908376_124908473_124911900_124912027_124921128_124921241_124921722_124921893_124923094_124923224_124926708_124926742_124928187_124928286_124929215_124929291_124931315_124931407_124938576_124938867_124940105_124940156_124940970
transcript_198.known	SIRV5	+	885	4	FSM	SIRV5A	SIRV509	885	4	0	0	0	0	multi-exon	FALSE	canonical	3	1119	junction_3	5326.59080046098	892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATAGTAACCTTGGTAAC	NA	False	NA	NA	False	AGTAAA	-10	NA	8315	11866	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV5_+_8382_8454_8586_10858_10992_11311
transcript_19800.nic	chr1	-	2992	24	NIC	ENSG00000143748.18	novel	3003	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_19	73.448437477348	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAACTTTTACTTTGA	-224326003	True	NA	-34	True	AATAAA	-19	NA	224330189	224227368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_224227671_224231225_224231297_224233200_224233290_224236505_224236583_224250211_224250319_224268033_224268134_224275338_224275459_224281122_224281186_224286025_224286131_224287774_224287994_224289483_224289734_224294266_224294412_224296500_224296619_224300561_224300664_224303722_224303858_224304735_224304813_224305033_224305167_224307990_224308264_224311799_224311858_224313049_224313152_224317693_224317794_224317877_224317931_224326390_224326465_224330070
transcript_198002.known	chr9	-	547	1	FSM	ENSG00000177736.4	ENST00000411625.2	547	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCAGCCCGGTTTTAAGG	NA	False	NA	NA	False	NA	NA	NA	124968840	124968293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_124968300_124968800
transcript_198005.known	chr9	-	4103	7	FSM	ENSG00000119414.12	ENST00000373547.9	4103	7	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_2	12.6809130410848	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGCTTGACTGGTGA	-125185295	True	NA	-1	True	ATTAAA	-18	NA	125189803	125146572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_125149922_125153532_125153743_125153905_125153986_125158240_125158383_125160840_125160907_125171084_125171181_125189643
transcript_198008.known	chr9	-	4172	6	FSM	ENSG00000119414.12	ENST00000415905.5	4172	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	154.519125029881	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTTGCTTGACTGGTG	NA	False	NA	-2	True	ATTAAA	-17	NA	125189939	125146573	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_125149922_125153532_125153743_125153905_125153986_125158240_125158383_125171084_125171181_125189643
transcript_198010.known	chr9	+	1466	9	FSM	ENSG00000136933.17	ENST00000394125.8	1466	9	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	79.9730423330262	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTCTTGGGAATGACTT	125197137	True	NA	138	True	ACTAAA	-20	NA	125200541	125234158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_125200578_125200779_125200907_125203007_125203067_125207563_125207722_125213369_125213523_125220538_125220701_125227909_125228060_125232595_125232746_125233687
transcript_198014.nnic	chr9	+	1154	8	NIC	ENSG00000136933.17	novel	1466	9	NA	NA	-11	-161	combination_of_known_splicesites	FALSE	canonical	3	13	junction_5	112.411779468458	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCTGTCAGTTACTTTCA	125197126	True	NA	12	True	AATAAA	-14	NA	125200530	125233997	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_125200578_125200779_125200907_125203007_125203067_125207563_125207722_125213369_125213523_125227909_125228060_125232595_125232746_125233687
transcript_198015.known	chr9	+	1313	8	FSM	ENSG00000136933.17	ENST00000259460.12	1313	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	109.263022854328	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTCTTGGGAATGACTT	125197137	True	NA	138	True	ACTAAA	-20	NA	125200541	125234158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_125200578_125200779_125200907_125203007_125203067_125207563_125207722_125220538_125220701_125227909_125228060_125232595_125232746_125233687
transcript_198017.known	chr9	+	1671	8	FSM	ENSG00000136933.17	ENST00000373538.8	1671	8	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_4	55.3552534239764	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTTGGGAATGACTTTCA	125197137	True	NA	NA	False	ACTAAA	-23	NA	125200541	125234161	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_125200907_125203007_125203067_125207563_125207722_125213369_125213523_125220538_125220701_125227909_125228060_125232595_125232746_125233687
transcript_198023.nic	chr9	+	1325	7	NIC	ENSG00000136933.17	novel	1671	8	NA	NA	26	-161	intron_retention	FALSE	canonical	3	26	junction_3	98.9518682098636	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCTGTCAGTTACTTTCA	125197166	True	NA	12	True	AATAAA	-14	NA	125200570	125233997	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_125200907_125203007_125203067_125207563_125207722_125220538_125220701_125227909_125228060_125232595_125232746_125233687
transcript_198025.nnic	chr9	+	1163	6	NIC	ENSG00000136933.17	novel	1671	8	NA	NA	26	-161	intron_retention	FALSE	canonical	3	30	junction_3	105.659074385497	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCTGTCAGTTACTTTCA	125197166	True	NA	12	True	AATAAA	-14	NA	125200570	125233997	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_125200907_125203007_125203067_125207563_125207722_125227909_125228060_125232595_125232746_125233687
transcript_198027.nic	chr9	+	1350	5	ISM	ENSG00000136933.17	ENST00000373538.8	1671	8	29	12979	26	524	5prime_fragment	FALSE	canonical	3	158	junction_4	61.9798354305656	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAATAAATAAA	125197166	True	NA	NA	False	AATAAA	-17	NA	125200570	125221182	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_125200907_125203007_125203067_125207563_125207722_125213369_125213523_125220538
transcript_198043.known	chr9	-	3921	8	FSM	ENSG00000044574.9	ENST00000324460.7	3921	8	0	0	0	0	multi-exon	FALSE	canonical	3	5278	junction_5	421.681618943845	5638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTGTCTGATGTCTATA	-125160052	True	NA	-27	True	ATTAAA	-15	NA	125241343	125234852	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_125237155_125238140_125238309_125238589_125238828_125238940_125239332_125239420_125239534_125240171_125240310_125240675_125240908_125241004
transcript_198046.known	chr9	-	4281	7	FSM	ENSG00000044574.9	ENST00000679475.1	4281	7	0	0	0	0	multi-exon	FALSE	canonical	3	5278	junction_5	439.937495560449	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAACTATGTGTCTGAT	-125160053	True	NA	-34	True	ATTAAA	-8	NA	125241344	125234859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_125237155_125238140_125238309_125238589_125238828_125238940_125239332_125239420_125239534_125240171_125240908_125241004
transcript_198050.known	chr9	-	4577	7	FSM	ENSG00000044574.9	ENST00000681675.1	4577	7	0	0	0	0	multi-exon	FALSE	canonical	3	5668	junction_5	351.297594640214	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAACTATGTGTCTGAT	-125160077	True	NA	-34	True	ATTAAA	-8	NA	125241368	125234859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_125237155_125238140_125238309_125238589_125238828_125238940_125239332_125239420_125240310_125240675_125240908_125241004
transcript_198052.known	chr9	-	4052	7	FSM	ENSG00000044574.9	ENST00000679355.1	4052	7	0	0	0	0	multi-exon	FALSE	canonical	3	5278	junction_4	455.395707050473	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAACTATGTGTCTGAT	-125160077	True	NA	-34	True	ATTAAA	-8	NA	125241368	125234859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_125237155_125238140_125238309_125238589_125239332_125239420_125239534_125240171_125240310_125240675_125240908_125241004
transcript_198057.known	chr9	-	3518	6	FSM	ENSG00000044574.9	ENST00000681540.1	3518	6	0	0	0	0	multi-exon	FALSE	canonical	3	5278	junction_3	238.599748532977	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTGGACTCAGGAACTT	-125160091	True	NA	NA	False	AAAAAG	-42	NA	125241382	125236561	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_125238828_125238940_125239332_125239420_125239534_125240171_125240310_125240675_125240908_125241004
transcript_198063.known	chr9	+	9176	28	FSM	ENSG00000165219.23	ENST00000297933.11	9176	28	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	39.8091124254079	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTTTCTGTCATCTA	125258681	True	NA	22	True	ATTAAA	-27	NA	125261825	125367207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_125261960_125268935_125268985_125295457_125295575_125298889_125299107_125301982_125302827_125305062_125305150_125307412_125307548_125307690_125307881_125312451_125312613_125321432_125321563_125323797_125323924_125326415_125326590_125330077_125330219_125331925_125332061_125332509_125332630_125337017_125337096_125337220_125337592_125341176_125341265_125342218_125342300_125346818_125346942_125349389_125349520_125350294_125350405_125350712_125350873_125354653_125354842_125355643_125355858_125359419_125359493_125360527_125360726_125362605
transcript_19807.known	chr1	-	2897	23	FSM	ENSG00000143748.18	ENST00000281701.11	2897	23	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_9	36.7676701770446	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTGACTATACAGAAAAGT	-224325986	True	NA	-10	True	AATAAA	-43	NA	224330172	224227344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_224227671_224231225_224231297_224233200_224233290_224236505_224236583_224250211_224250319_224268033_224268134_224275338_224275459_224281122_224281186_224286025_224286131_224287774_224287994_224289483_224289734_224294266_224294412_224296500_224296619_224300561_224300664_224303722_224303858_224304735_224304813_224305033_224305167_224307990_224308264_224311799_224311858_224317693_224317794_224317877_224317931_224326390_224326465_224330070
transcript_198077.known	chr9	+	8923	25	FSM	ENSG00000165219.23	ENST00000470056.5	8923	25	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_16	33.5993293170497	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTTTCTGTCATCTA	125258687	True	NA	22	True	ATTAAA	-27	NA	125261831	125367207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_125261960_125298889_125299107_125301982_125302827_125305062_125305150_125307412_125307548_125307690_125307881_125312451_125312613_125321432_125321563_125323797_125323924_125326415_125326590_125330077_125330219_125331925_125332061_125332509_125332630_125337017_125337096_125337220_125337592_125341176_125341265_125346818_125346942_125349389_125349520_125350294_125350405_125350712_125350873_125354653_125354842_125355643_125355858_125359419_125359493_125360527_125360726_125362605
transcript_198099.nic	chr9	+	3255	18	NIC	ENSG00000165219.23	novel	9176	28	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_2	32.6282404693322	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAAAGATGATCTGGGGC	125258643	True	NA	NA	False	AAGAAA	-15	NA	125261787	125342255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_125261960_125268935_125268985_125298889_125299107_125301982_125302827_125305062_125305150_125307412_125307548_125307690_125307881_125312451_125312613_125321432_125321563_125323797_125323924_125326415_125326590_125330077_125330219_125331925_125332061_125332509_125332630_125337017_125337096_125337220_125337592_125341176_125341265_125342218
transcript_198109.nic	chr9	+	3218	17	NIC	ENSG00000165219.23	novel	9176	28	NA	NA	-6	0	combination_of_known_junctions	TRUE	canonical	3	38	junction_2	33.4233614968632	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAATTTTATAAAATATTAG	125258643	True	NA	NA	False	NA	NA	NA	125261787	125341264	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_125261960_125268935_125268985_125298889_125299107_125301982_125302827_125305062_125305150_125307412_125307548_125307690_125307881_125312451_125312613_125321432_125321563_125323797_125323924_125326415_125326590_125330077_125330219_125331925_125332061_125332509_125332630_125337017_125337096_125337220_125337592_125341176
transcript_19811.known	chr1	-	2832	22	FSM	ENSG00000143748.18	ENST00000391875.6	2832	22	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_21	30.9661507832515	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAAAGTTACAGAGATCT	-224325984	True	NA	1	True	AATAAA	-29	NA	224330170	224227333	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_224227671_224231225_224231297_224233200_224233290_224236505_224236583_224250211_224250319_224268033_224268134_224275338_224275459_224281122_224281186_224286025_224286131_224287774_224287994_224289483_224289734_224294266_224294412_224296500_224296619_224300561_224300664_224303722_224303858_224304735_224304813_224305033_224305167_224307990_224308264_224311799_224311858_224317693_224317794_224317877_224317931_224330070
transcript_198112.nic	chr9	+	3137	17	NIC	ENSG00000165219.23	novel	5309	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_8	30.3685049640248	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAAAGATGATCTGGGGC	125258649	True	NA	NA	False	AAGAAA	-15	NA	125261793	125342255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_125261960_125298889_125299107_125301982_125302827_125305062_125305150_125307412_125307548_125307690_125307881_125312451_125312613_125321432_125321500_125323797_125323924_125326415_125326590_125330077_125330219_125331925_125332061_125332509_125332630_125337017_125337096_125337220_125337592_125341176_125341265_125342218
transcript_198114.nic	chr9	+	3200	17	NIC	ENSG00000165219.23	novel	5207	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_1	18.3250810025495	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAAAGATGATCTGGGGC	125258649	True	NA	NA	False	AAGAAA	-15	NA	125261793	125342255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_125261960_125298889_125299107_125301982_125302827_125305062_125305150_125307412_125307548_125307690_125307881_125312451_125312613_125321432_125321563_125323797_125323924_125326415_125326590_125330077_125330219_125331925_125332061_125332509_125332630_125337017_125337096_125337220_125337592_125341176_125341265_125342218
transcript_198118.known	chr9	+	3163	17	FSM	ENSG00000165219.23	ENST00000467750.5	3163	17	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	39.2356661725018	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAATTTTATAAAATATTAG	125258766	False	NA	NA	False	NA	NA	NA	125261910	125341264	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_125261960_125295457_125295575_125298889_125299107_125301982_125302827_125305062_125305150_125307412_125307548_125307690_125307881_125312451_125312613_125321432_125321563_125323797_125323924_125326415_125326590_125330077_125330219_125331925_125332061_125332509_125332630_125337017_125337096_125337220_125337592_125341176
transcript_198119.nnic	chr9	+	3305	17	NIC	ENSG00000165219.23	novel	3163	17	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	43.9415449773901	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAATTTTATAAAATATTAG	125258657	True	NA	NA	False	NA	NA	NA	125261801	125341264	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_125261960_125263550_125263701_125298889_125299107_125301982_125302827_125305062_125305150_125307412_125307548_125307690_125307881_125312451_125312613_125321432_125321563_125323797_125323924_125326415_125326590_125330077_125330219_125331925_125332061_125332509_125332630_125337017_125337096_125337220_125337592_125341176
transcript_198121.nic	chr9	+	3100	16	ISM	ENSG00000165219.23	ENST00000394083.6	4747	25	-49	21841	0	0	5prime_fragment	FALSE	canonical	3	31	junction_8	31.1886019066083	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAATTTTATAAAATATTAG	125258649	True	NA	NA	False	NA	NA	NA	125261793	125341264	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_125261960_125298889_125299107_125301982_125302827_125305062_125305150_125307412_125307548_125307690_125307881_125312451_125312613_125321432_125321500_125323797_125323924_125326415_125326590_125330077_125330219_125331925_125332061_125332509_125332630_125337017_125337096_125337220_125337592_125341176
transcript_198122.known	chr9	+	3720	16	FSM	ENSG00000165219.23	ENST00000497580.5	3720	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	37.6738046333995	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGGGAGAGCTGCTTTC	125258649	True	NA	NA	False	NA	NA	NA	125261793	125341864	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_125261960_125298889_125299107_125301982_125302827_125305062_125305150_125307412_125307548_125307690_125307881_125312451_125312613_125321432_125321563_125323797_125323924_125326415_125326590_125330077_125330219_125331925_125332018_125332509_125332630_125337017_125337096_125337220_125337592_125341176
transcript_198123.nic	chr9	+	3163	16	ISM	ENSG00000165219.23	ENST00000470056.5	8923	25	-38	25943	0	0	5prime_fragment	FALSE	canonical	3	79	junction_1	18.835427612171	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAATTTTATAAAATATTAG	125258649	True	NA	NA	False	NA	NA	NA	125261793	125341264	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_125261960_125298889_125299107_125301982_125302827_125305062_125305150_125307412_125307548_125307690_125307881_125312451_125312613_125321432_125321563_125323797_125323924_125326415_125326590_125330077_125330219_125331925_125332061_125332509_125332630_125337017_125337096_125337220_125337592_125341176
transcript_19813.known	chr1	-	2566	22	FSM	ENSG00000143748.18	ENST00000469075.5	2566	22	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_17	62.240408744847	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAACTTTTACTTTGA	-224325952	True	NA	-34	True	AATAAA	-19	NA	224330138	224227368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_224227671_224231225_224231297_224233200_224233290_224236505_224236583_224250211_224250319_224268033_224268134_224275338_224275459_224281122_224281186_224286025_224286131_224287774_224287994_224289483_224289734_224294266_224294412_224296500_224296619_224300561_224300664_224303722_224303858_224304735_224304813_224305033_224305167_224311799_224311858_224317693_224317794_224317877_224317931_224326390_224326465_224330070
transcript_198138.known	chr9	-	3369	12	FSM	ENSG00000119487.17	ENST00000265960.8	3369	12	0	0	0	0	multi-exon	FALSE	canonical	3	413	junction_4	172.37610234936	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGCATATTGTGTTGAG	-125690175	True	NA	NA	False	AATAAA	-18	NA	125707208	125437393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_125439013_125444500_125444599_125467971_125468110_125484442_125484584_125506309_125506418_125543058_125543169_125559632_125559810_125585554_125585728_125657650_125657800_125669817_125669908_125672315_125672644_125706970
transcript_198144.known	chr9	-	3045	11	FSM	ENSG00000119487.17	ENST00000373503.7	3045	11	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_10	273.449465166784	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGCATATTGTGTTGAG	-125690179	True	NA	NA	False	AATAAA	-18	NA	125707212	125437393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_125439013_125444500_125444599_125467971_125468110_125484442_125484584_125506309_125506418_125543058_125543169_125559632_125559810_125585554_125585728_125657650_125657800_125669817_125669908_125706970
transcript_198145.known	chr9	-	3256	11	FSM	ENSG00000119487.17	ENST00000350766.7	3256	11	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_4	143.058589396093	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGCATATTGTGTTGAG	-125690170	True	NA	NA	False	AATAAA	-18	NA	125707203	125437393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_125439013_125444500_125444599_125467971_125468110_125484442_125484584_125543058_125543169_125559632_125559810_125585554_125585728_125657650_125657800_125669817_125669908_125672315_125672644_125706970
transcript_198146.known	chr9	-	3252	11	FSM	ENSG00000119487.17	ENST00000373511.6	3252	11	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	267.553658169721	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCATATTGTGTTGAGT	-125690198	True	NA	NA	False	AATAAA	-19	NA	125707231	125437392	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_125439013_125444500_125444599_125467971_125468110_125506309_125506418_125543058_125543169_125559632_125559810_125585554_125585728_125657650_125657800_125669817_125669908_125672315_125672644_125706970
transcript_198156.known	chr9	-	2977	10	FSM	ENSG00000119487.17	ENST00000394063.5	2977	10	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_9	254.416737938387	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGCATATTGTGTTGAG	-125690201	True	NA	NA	False	AATAAA	-18	NA	125707234	125437393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_125439013_125444500_125444599_125467971_125468110_125484442_125484584_125506309_125506418_125543058_125543169_125559632_125559810_125585554_125585728_125657650_125657800_125706970
transcript_19817.known	chr1	-	2431	21	FSM	ENSG00000143748.18	ENST00000340871.8	2431	21	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_18	78.4815105614055	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTTGTGTGAAAATGCC	-224325953	True	NA	-119	True	AATGAA	-45	NA	224330139	224227453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_224227671_224231225_224231297_224233200_224233290_224236505_224236583_224250211_224250319_224268033_224268134_224275338_224275459_224281122_224281186_224286025_224286131_224287774_224287994_224289483_224289734_224294266_224294412_224296500_224296619_224300561_224300664_224301690_224301772_224303722_224303858_224304735_224304813_224305033_224305167_224317693_224317794_224317877_224317931_224330070
transcript_198179.known	chr9	-	1586	8	FSM	ENSG00000119487.17	ENST00000394060.7	1586	8	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	291.225909926031	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCTGTATTTCTTTACAG	-125690198	True	NA	2	True	AATAAA	-22	NA	125707231	125521467	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_125521766_125543058_125543169_125559632_125559810_125585554_125585728_125657650_125657800_125669817_125669908_125672315_125672644_125706970
transcript_198198.known	chr9	+	2840	9	FSM	ENSG00000167081.18	ENST00000373489.10	2840	9	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_6	34.8532638356869	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGATGCAGTTTCTTACT	125746969	True	NA	NA	False	AATAAA	-22	NA	125747372	125967377	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_125747654_125748549_125748624_125915685_125915928_125929654_125929846_125935471_125935608_125960683_125960850_125962101_125962215_125963011_125963102_125965830
transcript_1982.nic	chr1	+	2024	7	NIC	ENSG00000187017.18	novel	1339	8	NA	NA	97	0	intron_retention	FALSE	canonical	3	112	junction_1	14.135259302735	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCGACTTACATATATTTG	6447382	False	NA	22	True	NA	NA	NA	6447447	6460399	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_6448118_6448640_6449092_6451602_6451749_6451832_6452097_6457183_6457264_6457360_6457373_6459998
transcript_198200.known	chr9	+	4838	10	FSM	ENSG00000196814.15	ENST00000361171.8	4838	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	4.44999653211129	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGTTTGCTGTCGTGGT	126326531	True	NA	10	True	AATAAA	-20	NA	126326828	126507040	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_126327011_126340507_126340631_126381063_126381172_126386561_126386659_126392065_126392196_126395574_126395698_126421853_126421949_126481368_126481425_126483972_126484033_126503176
transcript_198206.known	chr9	+	5940	3	FSM	ENSG00000169155.10	ENST00000373464.5	5940	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	2.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTTTTCACTATGAG	126803354	True	NA	13	True	AATAAA	-24	NA	126805039	126838210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_126805133_126808792_126808916_126832486
transcript_198208.known	chr9	+	710	2	FSM	ENSG00000169155.10	ENST00000450858.1	710	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAACTCGTCCACAGAGC	126803347	True	NA	78	True	NA	NA	NA	126805032	126833096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_126805133_126832486
transcript_198219.nnic	chr9	+	2426	19	NIC	ENSG00000136828.19	novel	6330	19	NA	NA	-6	0	combination_of_known_splicesites	TRUE	canonical	2	22	junction_3	24.1098309952037	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTCAACAGCAGAGGATGA	126913072	True	NA	14	True	AATAAA	-20	NA	126914767	127217344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_126915013_126962224_126962347_126965843_126965952_127034430_127034515_127050042_127050133_127052846_127052940_127069229_127069357_127166068_127166207_127168678_127168773_127174714_127174783_127195090_127195218_127196473_127196632_127199014_127199067_127210694_127210779_127212130_127212237_127212626_127212720_127212943_127213050_127214750_127214843_127216905
transcript_198224.known	chr9	+	2362	18	FSM	ENSG00000136828.19	ENST00000424082.6	2362	18	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_17	15.3512507521042	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAACATCGCAGTGACT	126913078	True	NA	115	True	AAGAAA	-28	NA	126914773	127217445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_126915013_126962224_126962347_126965843_126965952_126977694_126977746_127034430_127034515_127050042_127050133_127052846_127052940_127069229_127069357_127166068_127166207_127168678_127168773_127174714_127174783_127195090_127195218_127210694_127210779_127212130_127212237_127212626_127212720_127212943_127213050_127214750_127214843_127216905
transcript_198233.nic	chr9	+	2177	17	NIC	ENSG00000136828.19	novel	2362	18	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	2	28	junction_5	19.4846694544711	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTCAACAGCAGAGGATGA	126913072	True	NA	14	True	AATAAA	-20	NA	126914767	127217344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_126915013_126962224_126962347_126965843_126965952_126977694_126977746_127034430_127034515_127052846_127052940_127069229_127069357_127166068_127166207_127168678_127168773_127174714_127174783_127195090_127195218_127210694_127210779_127212130_127212237_127212626_127212720_127212943_127213050_127214750_127214843_127216905
transcript_198254.known	chr9	-	3443	5	FSM	ENSG00000136859.10	ENST00000373425.8	3443	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	2.1650635094611	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGATGTATCTACACTCT	-127121657	True	NA	-15	True	AATAAA	-15	NA	127122635	127087347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127089139_127091669_127091941_127093732_127093927_127107914_127108781_127122314
transcript_19828.known	chr1	+	4096	5	FSM	ENSG00000143771.12	ENST00000465271.6	4096	5	0	0	0	0	multi-exon	FALSE	canonical	3	3659	junction_3	55.5714630003566	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTGTGGTGTTCTATT	224338464	True	NA	NA	False	AATAAA	-24	NA	224356878	224379452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_224356994_224360494_224360564_224365878_224365992_224371282_224371424_224375794
transcript_19829.known	chr1	+	808	5	FSM	ENSG00000143771.12	ENST00000366856.3	808	5	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_4	1577.84734686217	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTGTGGTGTTCTATT	224338478	True	NA	NA	False	AATAAA	-24	NA	224356892	224379452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_224356994_224360494_224360564_224365878_224365992_224371282_224371424_224379068
transcript_198293.known	chr9	+	2145	10	FSM	ENSG00000136856.18	ENST00000373371.8	2145	10	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	52.1914803132077	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTTTGTTCTGTTGACT	127394577	True	NA	NA	False	AATAAA	-34	NA	127397168	127407898	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_127397287_127397375_127397539_127397904_127398112_127399906_127400007_127402556_127402754_127403659_127403804_127403958_127404068_127404817_127404992_127405419_127405566_127407111
transcript_1983.nic	chr1	+	1989	7	NIC	ENSG00000187017.18	novel	1339	8	NA	NA	-15	0	intron_retention	FALSE	canonical	3	112	junction_1	14.135259302735	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGCTGTGGCCGCGACTTG	6446320	True	NA	22	True	ATTAAA	-30	NA	6448027	6460944	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_6448118_6448640_6449092_6451602_6451749_6451832_6452097_6457183_6457264_6457360_6457373_6459998
transcript_198305.known	chr9	+	1937	9	FSM	ENSG00000136856.18	ENST00000373360.7	1937	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	77.6650460310171	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTTTGTTCTGTTGACT	127394639	True	NA	NA	False	AATAAA	-34	NA	127397230	127407898	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_127397287_127397375_127397539_127397904_127398112_127399906_127400007_127402556_127402754_127403659_127403804_127403958_127404068_127404817_127404992_127407111
transcript_19832.known	chr1	+	912	5	FSM	ENSG00000143771.12	ENST00000366860.9	912	5	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	1830.06589703759	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTAGATTTCTAGTTC	224338472	True	NA	41	True	TATAAA	-24	NA	224356886	224375998	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_224356994_224364108_224364456_224365878_224365992_224371282_224371424_224375794
transcript_198321.nic	chr9	+	1750	9	NIC	ENSG00000136856.18	novel	2145	10	NA	NA	-14	13	combination_of_known_junctions	TRUE	canonical	3	50	junction_2	72.4084551347424	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGTCAGTGTCTCTGGGC	NA	False	NA	26	True	AATAAA	-16	NA	127397123	127407665	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_127397287_127397375_127397539_127399906_127400007_127402556_127402754_127403659_127403804_127403958_127404068_127404817_127404992_127405419_127405566_127407111
transcript_198322.nic	chr9	+	1983	9	NIC	ENSG00000136856.18	novel	2145	10	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_2	72.4084551347424	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTTTGTTCTGTTGACT	NA	False	NA	NA	False	AATAAA	-34	NA	127397123	127407898	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_127397287_127397375_127397539_127399906_127400007_127402556_127402754_127403659_127403804_127403958_127404068_127404817_127404992_127405419_127405566_127407111
transcript_198328.nic	chr9	+	2323	9	NIC	ENSG00000136856.18	novel	2145	10	NA	NA	-14	13	intron_retention	FALSE	canonical	3	162	junction_2	44.7826347483039	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGTCAGTGTCTCTGGGC	NA	False	NA	26	True	AATAAA	-16	NA	127397123	127407665	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_127397287_127397375_127398112_127399906_127400007_127402556_127402754_127403659_127403804_127403958_127404068_127404817_127404992_127405419_127405566_127407111
transcript_198332.known	chr9	+	1763	8	FSM	ENSG00000136856.18	ENST00000610552.4	1763	8	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	78.3341872872833	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAACAGCAAAAAA	127394546	True	NA	NA	False	NA	NA	NA	127397137	127407855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_127397287_127399906_127400007_127402556_127402754_127403659_127403804_127403958_127404068_127404817_127404992_127405419_127405566_127407111
transcript_19835.known	chr1	+	3963	4	FSM	ENSG00000143771.12	ENST00000366857.9	3963	4	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_3	1617.18541505502	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTGTGGTGTTCTATT	224338456	True	NA	NA	False	AATAAA	-24	NA	224356870	224379452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_224356994_224360494_224360564_224365878_224365992_224375794
transcript_198352.known	chr9	+	992	7	FSM	ENSG00000136856.18	ENST00000451404.5	992	7	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	79.831941532753	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTCATGGTGAGGGCAG	127394563	True	NA	NA	False	NA	NA	NA	127397154	127405555	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_127397287_127399906_127400007_127402556_127402754_127403659_127403804_127403958_127404068_127404817_127404992_127405419
transcript_198357.known	chr9	+	914	7	FSM	ENSG00000136856.18	ENST00000373352.5	914	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	110.67921615592	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCCAAGCCCAGAGCCC	127394634	True	NA	NA	False	NA	NA	NA	127397225	127407291	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_127397287_127399906_127400007_127403659_127403804_127403958_127404068_127404817_127404992_127405419_127405566_127407111
transcript_19838.known	chr1	+	1525	4	FSM	ENSG00000143771.12	ENST00000468318.5	1525	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	1741.56066663081	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTAGTTTGTGGTTTAAT	224338473	True	NA	11	True	AATAAA	-19	NA	224356887	224376884	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_224357069_224365878_224365992_224371282_224371424_224375794
transcript_198382.nnic	chr9	+	3200	6	NIC	ENSG00000196152.10	novel	2194	6	NA	NA	10	916	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	14.7186955943793	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCTTACTGTCTGTTT	127423609	True	NA	1	True	NA	NA	NA	127424391	127446288	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_127424911_127428551_127428661_127428831_127428921_127435089_127435217_127435907_127436004_127444028
transcript_198385.known	chr9	+	2194	6	FSM	ENSG00000196152.10	ENST00000543471.5	2194	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	13.7171425595858	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGACGCTCAGCTCTCC	127423591	True	NA	10	True	AATAAA	-23	NA	127424373	127445371	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_127424804_127428551_127428661_127428831_127428921_127435089_127435217_127435907_127436004_127444028
transcript_198388.known	chr9	+	2192	5	FSM	ENSG00000196152.10	ENST00000612342.4	2192	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	12.3768937944866	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGACGCTCAGCTCTCC	127423591	True	NA	10	True	AATAAA	-23	NA	127424373	127445371	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_127424911_127428831_127428921_127435089_127435217_127435907_127436004_127444028
transcript_198392.known	chr9	+	2078	5	FSM	ENSG00000196152.10	ENST00000342483.5	2078	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	11.5190060335083	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGACGCTCAGCTCTCCA	127423599	True	NA	11	True	AATAAA	-24	NA	127424381	127445372	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_127424804_127428831_127428921_127435089_127435217_127435907_127436004_127444028
transcript_198396.known	chr9	-	864	7	FSM	ENSG00000197958.13	ENST00000497825.5	864	7	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_6	3616.3224260136	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGGTGTGGCGTCTTC	-127372243	True	NA	-5	True	AATAAA	-23	NA	127451405	127447673	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127447727_127447876_127447990_127448336_127448424_127449280_127449363_127449609_127449709_127450730_127450805_127451049
transcript_198397.known	chr9	-	634	7	FSM	ENSG00000197958.13	ENST00000361436.10	634	7	0	0	0	0	multi-exon	FALSE	canonical	3	3600	junction_1	2119.74490734669	1944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGGTGTGGCGTCTTC	-127372244	True	NA	-5	True	AATAAA	-23	NA	127451406	127447673	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127447727_127447876_127447990_127448336_127448424_127449280_127449363_127449609_127449709_127450730_127450805_127451280
transcript_198400.known	chr9	-	499	6	FSM	ENSG00000197958.13	ENST00000536368.1	499	6	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_4	3708.79912640197	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTTTCTGGTGTGGCGTC	-127372211	True	NA	-8	True	AATAAA	-20	NA	127451373	127447676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127447727_127447876_127447990_127448336_127448424_127449280_127449363_127450730_127450805_127451280
transcript_198409.nic	chr9	-	1079	4	ISM	ENSG00000197958.13	ENST00000361436.10	634	7	-700	1609	-700	-173	5prime_fragment	FALSE	canonical	3	7776	junction_3	546.016483267676	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTAAGTTGTCTTTTCCCT	NA	False	NA	NA	False	AAGAAA	-9	NA	127452106	127449282	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_127449363_127449609_127449709_127450730_127450805_127451280
transcript_19841.known	chr1	+	2539	6	FSM	ENSG00000143786.8	ENST00000272133.4	2539	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	6.35609943282828	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTCACTTAACTGGCTC	224616137	True	NA	16	True	ATTAAA	-18	NA	224616316	224740554	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_224617256_224680957_224681027_224684795_224684844_224730461_224730575_224734562_224734707_224739328
transcript_198411.known	chr9	-	2275	4	FSM	ENSG00000197958.13	ENST00000497322.1	2275	4	0	0	0	0	multi-exon	FALSE	canonical	3	9090	junction_3	303.930182041132	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGATTTTCTGGTGTGGC	-127372243	True	NA	-11	True	AATAAA	-17	NA	127451405	127447679	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127447990_127448336_127448424_127449280_127449363_127449609
transcript_198415.known	chr9	+	3120	26	FSM	ENSG00000148356.15	ENST00000300417.11	3120	26	0	0	0	0	multi-exon	TRUE	canonical	3	117	junction_1	23.245679168396	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGCCTGAGTCATCAC	127449880	True	NA	19	True	AATAAA	-16	NA	127451509	127503499	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_127451670_127451928_127452085_127454495_127454600_127454997_127455055_127455575_127455621_127457315_127457394_127459002_127459072_127461172_127461258_127462251_127462374_127467739_127467831_127473800_127473932_127478933_127478964_127479382_127479506_127479838_127479979_127481182_127481228_127482949_127483021_127485735_127485836_127487675_127487764_127489443_127489519_127491214_127491296_127492801_127492898_127495319_127495419_127495963_127496096_127497252_127497335_127501009_127501144_127502773
transcript_198416.known	chr9	+	3376	25	FSM	ENSG00000148356.15	ENST00000323301.8	3376	25	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	21.0771977238173	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGCCTGAGTCATCAC	127449883	True	NA	19	True	AATAAA	-16	NA	127451512	127503499	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_127452085_127454495_127454600_127454997_127455055_127455575_127455621_127457315_127457394_127459002_127459072_127461172_127461258_127462251_127462374_127467739_127467831_127473800_127473932_127478933_127478964_127479382_127479506_127479838_127479979_127481182_127481228_127482949_127483021_127485735_127485836_127487675_127487764_127489443_127489519_127491214_127491296_127492801_127492898_127495319_127495419_127495963_127496096_127497252_127497335_127501009_127501144_127502773
transcript_198418.known	chr9	+	3026	25	FSM	ENSG00000148356.15	ENST00000675572.1	3026	25	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_21	39.5123046938827	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGCCTGAGTCATCAC	127449875	True	NA	19	True	AATAAA	-16	NA	127451504	127503499	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_127451670_127451928_127452085_127454495_127454600_127454997_127455055_127455575_127455621_127457315_127457394_127459002_127459072_127461172_127461258_127462251_127462374_127467739_127467831_127473800_127473932_127478933_127478964_127479382_127479506_127479838_127479979_127481182_127481228_127482949_127483021_127485735_127485836_127487675_127487764_127489443_127489519_127491214_127491296_127492801_127492898_127495963_127496096_127497252_127497335_127501009_127501144_127502773
transcript_198420.known	chr9	+	3261	24	FSM	ENSG00000148356.15	ENST00000675141.1	3261	24	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_20	39.0826761693662	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTCAGTGCGCTTCTG	127449885	True	NA	5	True	AATAAA	-2	NA	127451514	127503485	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_127452085_127454495_127454600_127454997_127455055_127455575_127455621_127457315_127457394_127459002_127459072_127461172_127461258_127462251_127462374_127467739_127467831_127473800_127473932_127478933_127478964_127479382_127479506_127479838_127479979_127481182_127481228_127482949_127483021_127485735_127485836_127487675_127487764_127489443_127489519_127491214_127491296_127492801_127492898_127495963_127496096_127497252_127497335_127501009_127501144_127502773
transcript_19843.nnic	chr1	+	2641	5	NIC	ENSG00000143786.8	novel	2539	6	NA	NA	-215	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	13.4350288425444	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTCACTTAACTGGCTC	NA	False	NA	16	True	ATTAAA	-18	NA	224616101	224740554	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_224617256_224680957_224681027_224684795_224684844_224734562_224734707_224739328
transcript_198433.known	chr9	-	3942	14	FSM	ENSG00000136830.12	ENST00000373312.4	3942	14	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_9	12.6724786832068	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTTGCCTTGAGTGGTG	-127566412	True	NA	-6	True	AATAAA	-14	NA	127569073	127505342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127507432_127507866_127507979_127508092_127508201_127508421_127508539_127508975_127509132_127510145_127510334_127516856_127517020_127517111_127517217_127517825_127517942_127523678_127523847_127525057_127525164_127527193_127527323_127531647_127531779_127568819
transcript_198434.known	chr9	-	828	6	FSM	ENSG00000136830.12	ENST00000468379.1	828	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	49.3274771298918	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGTCACCACCACCTGC	-127566292	False	NA	NA	False	GGGGCT	-17	NA	127568953	127507171	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127507432_127507866_127507935_127525057_127525164_127527193_127527323_127531647_127531779_127568819
transcript_198436.known	chr9	+	3825	20	FSM	ENSG00000136854.24	ENST00000637060.2	3825	20	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	41.8359148019142	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGGCAACGGAAGGAGAAAG	127609309	True	NA	43	True	GGGGCT	-18	NA	127612264	127692735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_127612441_127651602_127651653_127653714_127653797_127654941_127654965_127658374_127658452_127660029_127660109_127661101_127661206_127663204_127663354_127665246_127665332_127666165_127666297_127668079_127668188_127669897_127669959_127672050_127672117_127673180_127673262_127675803_127675943_127676643_127676754_127678430_127678533_127680156_127680243_127682405_127682561_127690774
transcript_19844.nnic	chr1	+	2694	5	NIC	ENSG00000143786.8	novel	2539	6	NA	NA	-203	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_2	8.8140512819021	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTCACTTAACTGGCTC	224616072	True	NA	16	True	ATTAAA	-18	NA	224616113	224740554	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_224617256_224680957_224681027_224730461_224730575_224734562_224734707_224739328
transcript_198440.known	chr9	+	3754	19	FSM	ENSG00000136854.24	ENST00000373299.5	3754	19	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_8	17.4674300087652	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGGTGTCCAGGGGGCTC	127609321	True	NA	7	True	AATAAA	-20	NA	127612276	127692699	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_127612441_127651602_127651653_127653714_127653797_127658374_127658452_127660029_127660109_127661101_127661206_127663204_127663354_127665246_127665332_127666165_127666297_127668079_127668188_127669897_127669959_127672050_127672117_127673180_127673262_127675803_127675943_127676643_127676754_127678430_127678533_127680156_127680243_127682405_127682561_127690774
transcript_198443.known	chr9	+	2918	19	FSM	ENSG00000136854.24	ENST00000636962.2	2918	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	34.6750791074961	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATTCTGATTGTGGTTA	127609266	True	NA	10	True	AATAAA	-25	NA	127612221	127696027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_127612441_127651602_127651653_127653714_127653797_127658374_127658452_127660029_127660109_127661101_127661206_127663204_127663354_127665246_127665332_127666165_127666297_127668079_127668188_127669897_127669959_127672050_127672117_127673180_127673262_127675803_127675943_127676643_127676754_127678430_127678533_127680156_127680243_127682405_127682561_127694993
transcript_198449.known	chr9	-	645	5	FSM	ENSG00000187024.15	ENST00000456267.5	645	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	54.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTAAAGTGGGGGTGACT	-127714027	True	NA	-47	True	NA	NA	NA	127715604	127713971	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127714190_127714378_127714425_127714602_127714703_127714974_127715195_127715543
transcript_198451.known	chr9	-	962	5	FSM	ENSG00000187024.15	ENST00000543175.5	962	5	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_3	7.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGGGTGCAGTGGCTCAC	-127714086	True	NA	NA	False	ATTAAA	-15	NA	127715663	127713806	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127714283_127714378_127714425_127714602_127714703_127714974_127715195_127715543
transcript_198456.known	chr9	-	1500	5	FSM	ENSG00000160404.18	ENST00000373284.10	1500	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	5.80409338312195	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGTTGCTAAGACTTTT	-127734240	True	NA	-8	True	AATAAA	-19	NA	127735294	127731523	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127732279_127732563_127732692_127733384_127733561_127734298_127734565_127735119
transcript_198459.known	chr9	-	569	4	FSM	ENSG00000187024.15	ENST00000414832.2	569	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	63.4052223576436	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCCACCAACCCAGCCAC	-127714054	True	NA	NA	False	NA	NA	NA	127715631	127714067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127714283_127714378_127714425_127714974_127715195_127715543
transcript_198462.known	chr9	-	1370	4	FSM	ENSG00000160404.18	ENST00000336067.10	1370	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	23.6267268622258	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGTTGCTAAGACTTTT	-127734238	True	NA	-8	True	AATAAA	-19	NA	127735292	127731523	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127732279_127733384_127733561_127734298_127734565_127735119
transcript_198463.known	chr9	-	933	4	FSM	ENSG00000160404.18	ENST00000496460.5	933	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	12.7104506432917	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAAACCCCTGGTCACCCC	-127734259	True	NA	NA	False	NA	NA	NA	127735313	127731843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127732279_127732563_127732692_127733384_127733561_127735119
transcript_198465.known	chr9	-	831	3	FSM	ENSG00000160404.18	ENST00000463256.5	831	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	16	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTGTGAATTATAACTCA	-127734221	True	NA	NA	False	NA	NA	NA	127735275	127731779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127732279_127733384_127733561_127735119
transcript_198466.known	chr9	-	855	3	FSM	ENSG00000160404.18	ENST00000493439.1	855	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	9	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGGGCCTGGAGCCAAG	-127734221	True	NA	NA	False	NA	NA	NA	127735275	127732168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127732692_127733384_127733561_127735119
transcript_198467.known	chr9	-	2477	3	FSM	ENSG00000160404.18	ENST00000373281.8	2477	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACTGTTGCTAAGACTTT	-127734240	True	NA	-9	True	AATAAA	-18	NA	127735294	127731524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127733561_127734298_127734565_127735119
transcript_198468.known	chr9	-	2211	2	FSM	ENSG00000160404.18	ENST00000463577.2	2211	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACTGTTGCTAAGACTTT	-127734240	True	NA	-9	True	AATAAA	-18	NA	127735294	127731524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127733561_127735119
transcript_198469.known	chr9	-	2750	11	FSM	ENSG00000095370.20	ENST00000373277.8	2750	11	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_3	5.93632883186233	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTCTCTCGGGCTCCTG	NA	False	NA	0	True	AATAAA	-17	NA	127771438	127738316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127738922_127739681_127739889_127740257_127740370_127741787_127741960_127742848_127742965_127744563_127745100_127747146_127747272_127749210_127749666_127751171_127751301_127761610_127761651_127771185
transcript_198470.known	chr9	-	2682	10	FSM	ENSG00000095370.20	ENST00000420366.5	2682	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	5.30780929444275	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTGTCTCTCGGGCTCCT	-127755154	True	NA	-1	True	AATAAA	-16	NA	127755304	127738317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127738922_127739681_127739889_127740257_127740370_127741787_127741960_127742848_127742965_127744563_127745100_127747146_127747272_127749210_127749666_127751171_127751301_127755078
transcript_198471.known	chr9	-	2478	10	FSM	ENSG00000095370.20	ENST00000629203.2	2478	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	6.66851826138829	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTGTTTTCGAGCCATG	-127755124	True	NA	NA	False	NA	NA	NA	127755274	127738485	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127738922_127739681_127739889_127740257_127740370_127741787_127741960_127742848_127742965_127744563_127745100_127747146_127747272_127749210_127749666_127751171_127751301_127755084
transcript_19848.known	chr1	-	7367	14	FSM	ENSG00000162923.17	ENST00000414423.9	7367	14	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_11	24.6701314267959	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTCTTGGTGTGTTACAT	-224432920	True	NA	NA	False	AATAAA	-18	NA	224434797	224385145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_224389861_224393827_224394014_224398096_224398227_224398514_224398594_224398888_224399035_224400949_224401070_224404429_224404571_224411426_224411566_224418259_224418417_224419517_224419616_224424517_224424655_224431476_224431582_224431681_224431782_224433683
transcript_198483.known	chr9	+	2483	7	FSM	ENSG00000136807.14	ENST00000373264.5	2483	7	0	0	0	0	multi-exon	FALSE	canonical	3	879	junction_5	61.170299619632	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTTTGGAG	127777373	True	NA	NA	False	AGTAAA	-16	NA	127786033	127790792	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_127786241_127786700_127786783_127787517_127787609_127787946_127788114_127788213_127788386_127788543_127788693_127789177
transcript_198489.known	chr9	+	2206	15	FSM	ENSG00000136877.15	ENST00000460181.5	2206	15	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	136.442127224815	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGGCAAAGCCTTCGAC	127797442	True	NA	6	True	ATTAAA	-17	NA	127802917	127814058	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_127803063_127804284_127804414_127804498_127804553_127804635_127804701_127806991_127807088_127807208_127807287_127807420_127807483_127807585_127807689_127808233_127808312_127808557_127808706_127808799_127808890_127809683_127809835_127810030_127810107_127810944_127811012_127813194
transcript_19849.known	chr1	-	6502	14	FSM	ENSG00000162923.17	ENST00000651911.2	6502	14	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_11	24.5402700081113	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATGAATACCTAAATAATT	-224432118	False	NA	NA	False	AATAAA	-3	NA	224433995	224385160	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_224389861_224393827_224394014_224398096_224398227_224398514_224398594_224398888_224399035_224400949_224401070_224404429_224404571_224411426_224411566_224418259_224418417_224419517_224419616_224424517_224424655_224431524_224431582_224431681_224431782_224433683
transcript_198496.known	chr9	+	2278	15	FSM	ENSG00000136877.15	ENST00000373225.7	2278	15	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	130.346085636725	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGCAAAGCCTTCGACT	127803195	False	NA	7	True	ATTAAA	-18	NA	127803207	127814059	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_127803405_127804284_127804414_127804498_127804553_127804635_127804701_127806972_127807088_127807208_127807287_127807420_127807483_127807585_127807689_127808233_127808312_127808557_127808706_127808799_127808890_127809683_127809835_127810030_127810107_127810944_127811012_127813194
transcript_198502.known	chr9	+	2160	14	FSM	ENSG00000136877.15	ENST00000630236.2	2160	14	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_9	141.376286688645	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGACCCCCTGCTCCCT	127797382	True	NA	29	True	ATTAAA	-40	NA	127802857	127814081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_127803063_127804284_127804414_127804498_127804553_127804635_127804701_127806972_127807088_127807208_127807287_127807420_127807483_127807585_127807689_127808233_127808312_127808799_127808890_127809683_127809835_127810030_127810107_127810944_127811012_127813194
transcript_198505.known	chr9	+	2230	14	FSM	ENSG00000136877.15	ENST00000393706.6	2230	14	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_5	141.398593098296	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGACCCCCTGCTCCCT	127797382	True	NA	29	True	ATTAAA	-40	NA	127802857	127814081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_127803063_127804284_127804414_127804498_127804553_127804635_127804701_127806972_127807088_127807420_127807483_127807585_127807689_127808233_127808312_127808557_127808706_127808799_127808890_127809683_127809835_127810030_127810107_127810944_127811012_127813194
transcript_19851.nnic	chr1	-	894	4	NNC	ENSG00000233384.3	novel	3958	4	NA	NA	-330	-513	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	10.2740233382816	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCATAGAAGTAAGGCATTC	-224616539	False	NA	-7	True	AATAAA	-19	NA	224616550	224611400	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_224611593_224615203_224615428_224615611_224615737_224616197
transcript_198513.known	chr9	+	1383	13	FSM	ENSG00000136877.15	ENST00000373228.5	1383	13	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_12	200.094075096913	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGCCGAGACCCCATCTT	127797435	True	NA	NA	False	NA	NA	NA	127802910	127813424	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_127803063_127804284_127804414_127804498_127804553_127804635_127804701_127806972_127807088_127807208_127807287_127807420_127807483_127807585_127807689_127808233_127808312_127808799_127808890_127809683_127809835_127810030_127810107_127813194
transcript_198526.known	chr9	+	898	8	FSM	ENSG00000136877.15	ENST00000475765.5	898	8	0	0	0	0	multi-exon	FALSE	canonical	3	515	junction_1	27.1706624497671	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCCAGCATTTCAGGAGG	127797456	False	NA	NA	False	NA	NA	NA	127802931	127807849	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_127803063_127804284_127804414_127804498_127804553_127804635_127804701_127806972_127807088_127807208_127807287_127807420_127807483_127807585
transcript_198528.known	chr9	-	2946	15	FSM	ENSG00000106991.14	ENST00000373203.9	2946	15	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_12	6.12622332639759	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGGGTTGGGCTGGGAG	-127854481	True	NA	-3	True	AATAAA	-17	NA	127854658	127815015	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127815807_127815942_127816054_127817148_127817204_127818119_127818378_127818715_127818833_127819621_127819661_127819899_127820038_127824303_127824447_127824799_127824975_127825230_127825358_127825694_127825861_127826509_127826673_127829686_127829828_127843093_127843246_127854288
transcript_198531.known	chr9	-	3059	14	FSM	ENSG00000106991.14	ENST00000344849.4	3059	14	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_11	6.35535463561072	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGATGGGTTGGGCTGGGA	-127854459	True	NA	-4	True	AATAAA	-16	NA	127854636	127815016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127816054_127817148_127817204_127818119_127818378_127818715_127818833_127819621_127819661_127819899_127820038_127824303_127824447_127824799_127824975_127825230_127825358_127825694_127825861_127826509_127826673_127829686_127829828_127843093_127843246_127854288
transcript_198532.nnic	chr9	-	2086	11	NNC	ENSG00000106991.14	novel	2946	15	NA	NA	-1177	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_10	7.1281133548787	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGGGTTGGGCTGGGAG	-127825565	False	17	-3	True	AATAAA	-17	NA	127825582	127815015	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_127815807_127815942_127816054_127817148_127817204_127818119_127818378_127818715_127818833_127819621_127819661_127819899_127820038_127824303_127824447_127824799_127824975_127825230_127825358_127825450
transcript_198536.known	chr9	-	1947	13	FSM	ENSG00000257524.6	ENST00000646171.1	1947	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	131.708933089429	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCACTAAAGGAATTTCTAA	-127896626	True	NA	-43	True	NA	NA	NA	127899591	127867863	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127868077_127868320_127868513_127871822_127871940_127872689_127872854_127873025_127873062_127874610_127874650_127885185_127885344_127886635_127886789_127887483_127887592_127890636_127891044_127894511_127894692_127896241_127896333_127899502
transcript_19855.nic	chr1	+	1203	8	NIC	ENSG00000185842.16	novel	1984	11	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	137	junction_6	56.0010932837886	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGCCTGTCTTTACTTTA	224925396	True	NA	3	True	AATAAA	-16	NA	224929628	224969829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_224929836_224952669_224952780_224954958_224955099_224960152_224960303_224964478_224964610_224967430_224967584_224968758_224968875_224969633
transcript_198550.known	chr9	-	2192	7	FSM	ENSG00000106992.19	ENST00000644144.2	2192	7	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_3	17.1310309737103	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTGAATCTATTGAAAGAAG	-127875280	True	NA	NA	False	AATAAA	-19	NA	127877675	127866485	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127868077_127868320_127868513_127871822_127871940_127872689_127872854_127873025_127873062_127874610_127874650_127877622
transcript_19856.known	chr1	+	1103	7	FSM	ENSG00000185842.16	ENST00000366850.7	1103	7	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_6	57.2463002200919	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTGTCAGAAACTTTAT	224925428	True	NA	10	True	AATAAA	-23	NA	224929660	224967923	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_224929836_224952669_224952780_224954958_224955099_224960152_224960303_224964478_224964610_224967430_224967584_224967679
transcript_198567.known	chr9	-	2357	7	FSM	ENSG00000160408.16	ENST00000291839.10	2357	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	126.399828586382	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGCTTCGTGTCCTGTGT	-127896609	True	NA	-15	True	AATAAA	-12	NA	127899574	127885325	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127886789_127887483_127887592_127890655_127891044_127894511_127894692_127896241_127896333_127897955_127898011_127899502
transcript_198576.known	chr9	-	2406	6	FSM	ENSG00000160408.16	ENST00000373144.7	2406	6	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_5	85.5789693791646	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCGTGTCCTGTGTCACC	-127896690	True	NA	-11	True	AATAAA	-16	NA	127899655	127885321	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127886789_127887483_127887592_127890636_127891044_127894511_127894692_127896241_127896333_127899502
transcript_198597.nnic	chr9	-	1586	7	NNC	ENSG00000136840.19	novel	1706	6	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45.7581201051306	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTCTAGCGTGGTCA	-127915105	True	NA	-10	True	NA	NA	NA	127917070	127907885	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_127908169_127908317_127908582_127909950_127910059_127912267_127912681_127914655_127914842_127916407_127916495_127916825
transcript_1986.known	chr1	+	813	7	FSM	ENSG00000187017.18	ENST00000475228.6	813	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	55.9665078417441	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAAGCTGCGGACGCTGG	6448369	False	NA	NA	False	NA	NA	NA	6448466	6460052	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_6448562_6448640_6448803_6451602_6451749_6451832_6452097_6457183_6457264_6457360_6457373_6459998
transcript_198600.nnic	chr9	-	2056	7	NNC	ENSG00000136840.19	novel	1706	6	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	54.8746045290736	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTCTAGCGTGGTCA	-127915105	True	NA	-10	True	NA	NA	NA	127917070	127907885	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_127908169_127908317_127908582_127909950_127910529_127912267_127912681_127914655_127914842_127916407_127916495_127916825
transcript_198605.nnic	chr9	-	1470	6	NNC	ENSG00000136840.19	novel	1706	6	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	56.9301326188513	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTCTAGCGTGGTCA	-127915076	True	NA	-10	True	NA	NA	NA	127917041	127907885	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_127908169_127908317_127908582_127909950_127910059_127912267_127912681_127914655_127914842_127916825
transcript_19861.nic	chr1	+	2801	6	ISM	ENSG00000185842.16	ENST00000366850.7	1103	7	-32	-1570	-25	0	intron_retention	FALSE	canonical	3	219	junction_3	25.255494451703	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAATCATAAGGGAGAGA	224925396	True	NA	NA	False	AATAAA	-22	NA	224929628	224969493	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_224929836_224952669_224952780_224954958_224955099_224960152_224960303_224964478_224964610_224967430
transcript_198613.known	chr9	-	1706	6	FSM	ENSG00000136840.19	ENST00000335791.10	1706	6	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_5	10.2254584249314	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTCTAGCGTGGTCA	-127915076	True	NA	-10	True	NA	NA	NA	127917041	127907885	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127908582_127909950_127910059_127912267_127912681_127914655_127914842_127916407_127916495_127916825
transcript_198615.nic	chr9	-	2205	6	NIC	ENSG00000136840.19	novel	1706	6	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_2	44.1225565895722	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTCTAGCGTGGTCA	-127915105	True	NA	-10	True	NA	NA	NA	127917070	127907885	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_127908582_127909950_127910529_127912267_127912681_127914655_127914842_127916407_127916495_127916825
transcript_198617.known	chr9	-	1013	5	FSM	ENSG00000136840.19	ENST00000361444.3	1013	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	46.5778917513449	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGCCAAGAAGAGGCCCA	-127915031	True	NA	NA	False	NA	NA	NA	127916996	127908446	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127908582_127909950_127910059_127912267_127912681_127914655_127914842_127916825
transcript_198623.nnic	chr9	-	2273	11	NNC	ENSG00000167103.12	novel	2176	10	NA	NA	-38	-2	intron_retention	FALSE	canonical	2	6	junction_2	24.6162547923115	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGTGACAGGCCCTCTG	-127924477	False	NA	-8	True	ATTAAA	-17	NA	127930823	127920882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_127922115_127923977_127924031_127925106_127925261_127925866_127925980_127927152_127927209_127927296_127927332_127927647_127927773_127928064_127928220_127928432_127928484_127929687_127929886_127930722
transcript_198627.known	chr9	-	2176	10	FSM	ENSG00000167103.12	ENST00000388747.9	2176	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_9	27.177514307799	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGACAGGCCCTCTGCT	-127924431	False	6346	-6	True	ATTAAA	-19	NA	127930777	127920880	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127922115_127925106_127925261_127925866_127925980_127927152_127927209_127927296_127927332_127927647_127927773_127928064_127928220_127928432_127928484_127929687_127929886_127930722
transcript_19864.nic	chr1	+	392	3	ISM	ENSG00000185842.16	ENST00000366850.7	1103	7	-32	12890	-25	-6296	5prime_fragment	FALSE	canonical	3	241	junction_1	4	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAACATTGGAATATAAAA	224925396	True	NA	67	True	NA	NA	NA	224929628	224955033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_224929836_224952669_224952780_224954958
transcript_198642.known	chr9	-	1104	5	FSM	ENSG00000167103.12	ENST00000300432.3	1104	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	17.5926120857592	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGCTTTTGGATTCCGG	-127926725	True	NA	-5	True	AATAAA	-20	NA	127927491	127921528	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127922115_127925106_127925261_127925866_127925980_127927152_127927209_127927296
transcript_198659.known	chr9	-	4617	11	FSM	ENSG00000167106.12	ENST00000373095.6	4617	11	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_9	9.33220231242337	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGTTTTGTTTTTAC	-127978850	True	NA	-9	True	ATTAAA	-19	NA	127980989	127940581	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127943238_127944614_127944685_127944776_127944899_127945366_127945563_127945648_127945754_127948070_127948226_127948367_127948415_127950422_127950540_127953574_127953605_127953804_127953926_127979991
transcript_198664.nnic	chr9	-	860	5	NNC	ENSG00000136908.18	novel	912	4	NA	NA	-34	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	573.73948792113	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTCTGTGCCGTGTTT	-127931542	True	NA	-8	True	AATAAA	-14	NA	127937888	127935100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_127935146_127935229_127935781_127936552_127936656_127937433_127937524_127937817
transcript_198666.known	chr9	-	912	4	FSM	ENSG00000136908.18	ENST00000314392.13	912	4	0	0	0	0	multi-exon	FALSE	canonical	3	622	junction_3	357.125561485966	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGTGCCGTGTTTAC	-127931508	True	NA	-6	True	AATAAA	-16	NA	127937854	127935098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127935781_127936552_127936656_127937433_127937524_127937817
transcript_198668.nnic	chr9	-	846	3	NIC	ENSG00000136908.18	novel	912	4	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	3	112	junction_2	671	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGTGCCGTGTTTAC	-127931532	True	NA	-6	True	AATAAA	-16	NA	127937878	127935098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_127935781_127936552_127936656_127937817
transcript_198669.known	chr9	-	1662	3	FSM	ENSG00000136908.18	ENST00000495270.1	1662	3	0	0	0	0	multi-exon	FALSE	canonical	3	622	junction_2	416	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGTGCCGTGTTTAC	-127931480	True	NA	-6	True	AATAAA	-16	NA	127937826	127935098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_127935781_127936552_127937524_127937817
transcript_198672.known	chr9	+	3437	11	FSM	ENSG00000148339.13	ENST00000373069.10	3437	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	29.0592498182592	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGAGCCAGTATTTTTC	128067474	True	NA	12	True	AATAAA	-17	NA	128068231	128109245	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128068581_128101095_128101223_128101308_128101397_128102079_128102116_128102369_128102482_128103680_128103840_128105728_128105882_128106149_128106258_128106352_128106521_128107028_128107180_128107259
transcript_198675.known	chr9	+	3431	10	FSM	ENSG00000148339.13	ENST00000373068.6	3431	10	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	9.03081145609604	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATGGAGCCAGTATTTTT	128067443	True	NA	11	True	AATAAA	-16	NA	128068200	128109244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128068581_128101095_128101223_128101308_128101397_128102369_128102482_128103680_128103840_128105728_128105882_128106149_128106258_128106352_128106521_128107028_128107180_128107259
transcript_198676.known	chr9	+	3678	10	FSM	ENSG00000148339.13	ENST00000432073.6	3678	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	24.2441287279576	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGAGCCAGTATTTTTC	128091450	False	NA	12	True	AATAAA	-17	NA	128091463	128109245	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128092090_128101095_128101223_128101308_128101397_128102369_128102482_128103680_128103840_128105728_128105882_128106149_128106258_128106352_128106521_128107028_128107180_128107259
transcript_198677.known	chr9	+	3474	10	FSM	ENSG00000148339.13	ENST00000373064.9	3474	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	20.8599089755717	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGAGCCAGTATTTTTC	128098290	False	NA	12	True	AATAAA	-17	NA	128098303	128109245	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128098726_128101095_128101223_128101308_128101397_128102369_128102482_128103680_128103840_128105728_128105882_128106149_128106258_128106352_128106521_128107028_128107180_128107259
transcript_198680.nic	chr9	-	1874	3	NIC	ENSG00000171169.9	novel	3398	2	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	2	18	junction_1	3.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCTGTGTCTTTATTGC	-128067296	False	NA	-2	True	ATTAAA	-24	NA	128067343	128061232	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_128061827_128063373_128063901_128066590
transcript_198681.known	chr9	-	3398	2	FSM	ENSG00000171169.9	ENST00000373078.5	3398	2	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCTGTGTCTTTATTGC	-128066887	True	NA	-2	True	ATTAAA	-24	NA	128067320	128061232	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128063901_128066590
transcript_198688.known	chr9	-	1664	8	FSM	ENSG00000148334.16	ENST00000677651.1	1664	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	574.239230528141	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATGGCAGGCATCTCAT	-128117637	True	NA	-27	True	AATAAA	-19	NA	128127725	128120715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128121274_128122361_128122480_128122933_128123135_128123701_128123852_128124491_128124551_128124778_128124872_128125243_128125442_128127438
transcript_19869.known	chr1	-	3748	14	FSM	ENSG00000143815.15	ENST00000272163.9	3748	14	0	0	0	0	multi-exon	FALSE	canonical	3	574	junction_2	65.9230320437869	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGAGCCTTTTTTTTTT	-225416920	True	NA	-6	True	AATAAA	-21	NA	225428038	225401501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_225403464_225404403_225404527_225404625_225404707_225406663_225406833_225410290_225410417_225411336_225411441_225412453_225412646_225415277_225415333_225417983_225418181_225419262_225419453_225419714_225419799_225422076_225422278_225423910_225424090_225427953
transcript_198691.known	chr9	-	1614	8	FSM	ENSG00000148334.16	ENST00000277462.9	1614	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	578.149475764296	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCCGTGTGGCTGAGTGC	-128128423	False	NA	-5	True	AATAAA	-41	NA	128128462	128120693	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128121274_128122361_128122480_128122933_128123135_128123701_128123852_128124491_128124551_128124778_128124872_128125243_128125442_128128247
transcript_198696.known	chr9	-	1831	8	FSM	ENSG00000148334.16	ENST00000679345.1	1831	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	581.866174388887	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATGGCAGGCATCTCAT	-128117641	True	NA	-27	True	AATAAA	-19	NA	128127729	128120715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128121274_128122361_128122647_128122933_128123135_128123701_128123848_128124491_128124551_128124778_128124872_128125243_128125442_128127438
transcript_198702.known	chr9	-	1598	7	FSM	ENSG00000148334.16	ENST00000338961.11	1598	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	451.684870481868	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGTGTGGCTGAGTGCT	-128117641	True	NA	-4	True	AATAAA	-42	NA	128127729	128120692	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128121274_128122361_128122480_128122933_128123135_128123701_128123852_128124491_128124551_128125243_128125442_128127438
transcript_198706.known	chr9	-	1667	7	FSM	ENSG00000148334.16	ENST00000676562.1	1667	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	565.475537342981	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATGGCAGGCATCTCAT	-128117636	True	NA	-27	True	AATAAA	-19	NA	128127724	128120715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128121274_128122361_128122480_128122933_128123135_128123701_128123852_128124491_128124551_128125243_128125539_128127438
transcript_198707.known	chr9	-	1554	7	FSM	ENSG00000148334.16	ENST00000678174.1	1554	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	569.278685901925	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATGGCAGGCATCTCAT	-128117644	True	NA	-27	True	AATAAA	-19	NA	128127732	128120715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128121274_128122361_128122480_128122933_128123135_128123725_128123852_128124491_128124551_128125243_128125442_128127438
transcript_198710.known	chr9	-	1748	7	FSM	ENSG00000148334.16	ENST00000678916.1	1748	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	451.684870481868	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATGGCAGGCATCTCAT	-128117647	True	NA	-27	True	AATAAA	-19	NA	128127735	128120715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128121274_128122361_128122647_128122933_128123135_128123701_128123852_128124491_128124551_128125243_128125442_128127438
transcript_198712.known	chr9	-	2103	7	FSM	ENSG00000148334.16	ENST00000496594.5	2103	7	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_4	531.283796310618	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGCCTGTCATGGCAGGC	-128117629	True	NA	-34	True	AATAAA	-12	NA	128127717	128120722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128121274_128122361_128123135_128123701_128123852_128124491_128124551_128124778_128124872_128125243_128125442_128127438
transcript_198718.nic	chr9	-	2796	6	NIC	ENSG00000148334.16	novel	2103	7	NA	NA	-12	0	intron_retention	FALSE	canonical	3	1124	junction_4	64.6733329897261	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCCGTGTGGCTGAGTGC	-128128435	True	NA	-5	True	AATAAA	-41	NA	128128474	128120693	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_128121274_128122361_128123135_128123701_128123852_128124491_128124551_128125243_128125442_128127438
transcript_198724.known	chr9	-	930	6	FSM	ENSG00000148334.16	ENST00000474124.6	930	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	562.368349038244	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGAGGCTGCTGACAAG	-128117644	True	NA	NA	False	NA	NA	NA	128127732	128122447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128122480_128122933_128123135_128123701_128123848_128124491_128124551_128125243_128125442_128127438
transcript_198730.known	chr9	-	3080	5	FSM	ENSG00000148334.16	ENST00000483625.6	3080	5	0	0	0	0	multi-exon	FALSE	canonical	3	1124	junction_3	37.676252467569	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACTGGGACATGTTTGCA	-128117647	True	NA	-70	True	NA	NA	NA	128127735	128120758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128123135_128123701_128123852_128124491_128124551_128125243_128125442_128127438
transcript_198740.known	chr9	-	2907	18	FSM	ENSG00000148337.22	ENST00000357558.9	2907	18	0	0	0	0	multi-exon	TRUE	canonical	1	25	junction_10	108.733953594817	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCCCACCAGTACTTCTG	-128188743	True	NA	-13	True	AATAAA	-21	NA	128191589	128166065	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128166407_128166758_128166881_128167094_128167165_128169051_128169202_128169405_128169520_128170019_128170108_128176350_128176476_128177565_128177764_128178368_128178491_128178708_128178905_128178988_128179416_128180414_128180524_128180720_128180815_128185546_128185777_128187862_128187935_128190328_128190445_128190687_128190863_128191431
transcript_198741.nic	chr9	-	2840	18	NIC	ENSG00000148337.22	novel	2858	18	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	162	junction_10	86.5244330154813	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGTTCCCACCAGTAC	-128191597	False	NA	-18	True	AATAAA	-16	NA	128191611	128166070	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_128166407_128166758_128166881_128167094_128167165_128169051_128169202_128169405_128169520_128170019_128170108_128176350_128176476_128177565_128177764_128178368_128178491_128178708_128178905_128179072_128179416_128180414_128180524_128180720_128180815_128185546_128185777_128187862_128187935_128190328_128190445_128190687_128190863_128191431
transcript_198752.known	chr9	-	2731	17	FSM	ENSG00000148337.22	ENST00000372954.5	2731	17	0	0	0	0	multi-exon	TRUE	canonical	3	133	junction_14	95.6386223957142	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCCACCAGTACTTCTGT	-128188722	True	NA	-12	True	AATAAA	-22	NA	128191568	128166064	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128166407_128166758_128166881_128167094_128167165_128169051_128169202_128169405_128169520_128170019_128170108_128176350_128176476_128177565_128177764_128178368_128178491_128178708_128178905_128179072_128179416_128180414_128180524_128180720_128180815_128185546_128185777_128190328_128190445_128190687_128190863_128191431
transcript_198758.known	chr9	-	2975	17	FSM	ENSG00000148337.22	ENST00000372938.10	2975	17	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_13	71.9364954317348	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCCACCAGTACTTCTGT	-128188726	True	NA	-12	True	AATAAA	-22	NA	128191572	128166064	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128166407_128166758_128166881_128167094_128167165_128169051_128169202_128169405_128169520_128170019_128170108_128176350_128176476_128177565_128177764_128178368_128178491_128178708_128179416_128180414_128180524_128180720_128180815_128185546_128185777_128187862_128187935_128190328_128190445_128190687_128190863_128191431
transcript_198759.nic	chr9	-	2915	17	NIC	ENSG00000148337.22	novel	2858	18	NA	NA	-41	0	intron_retention	FALSE	canonical	3	9	junction_16	115.003736352346	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGTTCCCACCAGTAC	-128191363	True	NA	-18	True	AATAAA	-16	NA	128191818	128166070	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_128166407_128166758_128166881_128167094_128167165_128169051_128169202_128169405_128169520_128170019_128170108_128176350_128176476_128177565_128177764_128178368_128178491_128178708_128179416_128180414_128180524_128180720_128180815_128185546_128185777_128187862_128187935_128190328_128190445_128190687_128190863_128191731
transcript_198768.nic	chr9	-	2467	16	NIC	ENSG00000148337.22	novel	2731	17	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_13	114.993023943001	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGTTCCCACCAGTAC	-128188709	True	NA	-18	True	AATAAA	-16	NA	128191555	128166070	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_128166407_128166758_128166881_128167094_128167165_128169051_128169202_128169405_128169520_128170019_128170108_128176350_128176476_128177565_128177764_128178368_128178491_128178708_128178905_128179072_128179416_128180414_128180524_128180720_128180800_128190328_128190445_128190687_128190863_128191431
transcript_19877.nnic	chr1	-	3724	13	NIC	ENSG00000143815.15	novel	3748	14	NA	NA	-55	0	intron_retention	FALSE	canonical	3	93	junction_4	182.543659161309	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGAGCCTTTTTTTTT	-225417023	True	NA	-7	True	AATAAA	-20	NA	225428141	225401502	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_225403464_225404403_225404527_225404625_225404707_225406663_225406833_225411336_225411441_225412453_225412646_225415277_225415333_225417983_225418181_225419262_225419453_225419714_225419799_225422076_225422278_225423910_225424090_225427953
transcript_198775.known	chr9	-	2855	16	FSM	ENSG00000148337.22	ENST00000629610.2	2855	16	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_14	116.909005451058	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTTCCCACCAGTACTT	-128188726	True	NA	-16	True	AATAAA	-18	NA	128191572	128166068	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128166407_128166758_128166881_128167094_128167165_128169051_128169202_128169405_128169520_128170019_128170108_128176350_128176476_128177565_128177764_128178368_128178491_128178708_128179416_128180414_128180524_128180720_128180815_128185546_128185777_128187862_128187935_128190687_128190863_128191431
transcript_198777.nic	chr9	-	2936	16	NIC	ENSG00000148337.22	novel	2975	17	NA	NA	-22	0	intron_retention	FALSE	canonical	3	133	junction_13	82.0123567925387	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGTTCCCACCAGTAC	-128191597	False	NA	-18	True	AATAAA	-16	NA	128191611	128166070	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_128166407_128166758_128166881_128167094_128167165_128169051_128169202_128169405_128169520_128170019_128170108_128176350_128176476_128177565_128177764_128178368_128178491_128178708_128179416_128180414_128180524_128180720_128180815_128185546_128185777_128190328_128190445_128190687_128190863_128191431
transcript_198790.nic	chr9	-	2691	15	NIC	ENSG00000148337.22	novel	2975	17	NA	NA	-22	0	intron_retention	FALSE	canonical	3	35	junction_12	104.809861858783	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGTTCCCACCAGTAC	-128191597	False	NA	-18	True	AATAAA	-16	NA	128191611	128166070	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_128166407_128166758_128166881_128167094_128167165_128169051_128169202_128169405_128169520_128170019_128170108_128176350_128176476_128177565_128177764_128178368_128178491_128178708_128179416_128180414_128180524_128180720_128180800_128190328_128190445_128190687_128190863_128191431
transcript_198792.nic	chr9	-	2820	15	NIC	ENSG00000148337.22	novel	2855	16	NA	NA	-22	0	intron_retention	FALSE	canonical	3	19	junction_13	110.10996358928	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGTTCCCACCAGTAC	-128191597	False	NA	-18	True	AATAAA	-16	NA	128191611	128166070	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_128166407_128166758_128166881_128167094_128167165_128169051_128169202_128169405_128169520_128170019_128170108_128176350_128176476_128177565_128177764_128178368_128178491_128178708_128179416_128180414_128180524_128180720_128180815_128185546_128185777_128190687_128190863_128191431
transcript_198810.known	chr9	+	1570	3	FSM	ENSG00000171159.5	ENST00000492588.1	1570	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	7	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTGAGTGTCCACATTAA	128152193	True	NA	-20	True	NA	NA	NA	128160313	128163890	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128160487_128162003_128162953_128163442
transcript_198812.known	chr9	+	704	2	FSM	ENSG00000171159.5	ENST00000372994.2	704	2	0	0	0	0	multi-exon	FALSE	canonical	3	929	junction_1	0	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCTGTGCCTCTCTCCTCT	128152144	True	NA	14	True	ATTAAA	-14	NA	128160264	128163924	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128160487_128163442
transcript_198814.known	chr9	+	3835	21	FSM	ENSG00000106976.21	ENST00000628346.2	3835	21	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	134.999481480486	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCCTCTGCTGGTTGTG	128198207	True	NA	23	True	AATAAA	-24	NA	128203396	128255244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128203632_128218230_128218305_128218581_128218732_128219048_128219253_128219987_128220087_128220180_128220342_128222196_128222340_128222460_128222597_128222792_128222861_128224250_128224390_128234020_128234108_128239444_128239516_128239727_128239780_128242231_128242346_128246393_128246504_128247374_128247487_128247923_128247936_128248582_128248754_128250114_128250357_128250724_128250941_128254005
transcript_198815.known	chr9	-	933	9	FSM	ENSG00000167112.10	ENST00000460320.1	933	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	221.72674624411	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTACCCCTCAGGTAGCT	-128318764	True	NA	NA	False	NA	NA	NA	128322413	128309692	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128309876_128310886_128311024_128311528_128311602_128313807_128313890_128315566_128315629_128315821_128315897_128317151_128317227_128321598_128321731_128322299
transcript_198817.known	chr9	-	5426	8	FSM	ENSG00000167112.10	ENST00000372890.6	5426	8	0	0	0	0	multi-exon	FALSE	canonical	3	454	junction_1	38.9389894316633	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTTGCTCATTGTCTTT	-128318798	True	NA	-26	True	ATTAAA	-7	NA	128322447	128305158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128309876_128310886_128311024_128311528_128311602_128313807_128313890_128315566_128315629_128317151_128317227_128321598_128321731_128322299
transcript_19882.nnic	chr1	-	2839	13	NIC	ENSG00000143815.15	novel	3748	14	NA	NA	-55	702	combination_of_known_splicesites	FALSE	canonical	3	93	junction_4	182.543659161309	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAATAAGTATATATTTTT	-225417023	True	NA	NA	False	TATAAA	-22	NA	225428141	225402387	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_225403464_225404403_225404527_225404625_225404707_225406663_225406833_225411336_225411441_225412453_225412646_225415277_225415333_225417983_225418181_225419262_225419453_225419714_225419799_225422076_225422278_225423910_225424090_225427953
transcript_198825.known	chr9	+	466	5	FSM	ENSG00000175854.14	ENST00000495313.5	466	5	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	78.4932321923362	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCACAGCTCCCAGGGAC	NA	False	NA	NA	False	NA	NA	NA	128275378	128288733	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128275497_128276706_128276756_128284509_128284632_128285938_128286034_128288651
transcript_198826.known	chr9	+	763	5	FSM	ENSG00000175854.14	ENST00000418976.2	763	5	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	17.4266319178434	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTCTTCTCCAATAGCC	128273272	True	NA	17	True	AATAAA	-17	NA	128276243	128288989	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128276403_128276706_128276756_128284509_128284632_128285938_128286034_128288651
transcript_198827.known	chr9	+	906	5	FSM	ENSG00000175854.14	ENST00000608796.6	906	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	68.1189217471915	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCTTCTCCAATAGCCC	128276206	False	NA	18	True	AATAAA	-18	NA	128276221	128288990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128276403_128276586_128276756_128284509_128284632_128285938_128286034_128288651
transcript_198830.known	chr9	+	1245	7	FSM	ENSG00000167113.11	ENST00000300452.8	1245	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	55.8271140814808	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCTGCTTGTCCTCCTTT	128321392	True	NA	12	True	AATAAA	-18	NA	128322838	128334072	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128322929_128323015_128323148_128325142_128325240_128325778_128325882_128332152_128332283_128332849_128332944_128333473
transcript_198836.nnic	chr9	+	1481	6	NIC	ENSG00000167113.11	novel	1245	7	NA	NA	-71	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	68.7121532190631	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCTGCTTGTCCTCCTTT	128321768	True	NA	12	True	AATAAA	-18	NA	128322472	128334072	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_128322929_128323015_128323148_128325142_128325240_128325778_128325882_128332849_128332944_128333473
transcript_198838.nnic	chr9	+	1514	6	NIC	ENSG00000167113.11	novel	1245	7	NA	NA	-71	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	63.8704939702207	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCTGCTTGTCCTCCTTT	128321768	True	NA	12	True	AATAAA	-18	NA	128322472	128334072	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_128322929_128323015_128323148_128325778_128325882_128332152_128332283_128332849_128332944_128333473
transcript_198840.nnic	chr9	+	1384	5	NIC	ENSG00000167113.11	novel	1245	7	NA	NA	-71	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	68.9252312292095	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCTGCTTGTCCTCCTTT	128321768	True	NA	12	True	AATAAA	-18	NA	128322472	128334072	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_128322929_128323015_128323148_128325778_128325882_128332849_128332944_128333473
transcript_198841.known	chr9	+	781	3	FSM	ENSG00000167113.11	ENST00000608951.5	781	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	37.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTAGGGTTCTACAGTG	128322475	False	NA	8	True	AATAAA	-25	NA	128322581	128323584	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128322929_128323015_128323148_128323282
transcript_198842.known	chr9	+	956	2	FSM	ENSG00000167113.11	ENST00000609948.1	956	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGGGTTCTACAGTGTT	128322520	False	NA	10	True	AATAAA	-27	NA	128322543	128323586	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128322929_128323015
transcript_198844.nnic	chr9	+	2847	14	NNC	ENSG00000167114.13	novel	3229	13	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	49.1697939700102	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTAGCCTGTGTGCAAAC	NA	False	NA	15	True	AATAAA	-15	NA	128340485	128361217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_128340584_128340753_128340839_128343126_128343294_128345154_128345550_128348544_128348704_128350311_128350382_128350483_128350576_128352637_128352748_128353024_128353235_128353414_128353542_128355052_128355191_128355397_128355563_128355649_128355797_128360333
transcript_198845.nnic	chr9	+	2866	14	NNC	ENSG00000167114.13	novel	3229	13	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	49.1697939700102	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTAGCCTGTGTGCAAAC	NA	False	NA	15	True	AATAAA	-15	NA	128340500	128361217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_128340618_128340753_128340839_128343126_128343294_128345154_128345550_128348544_128348704_128350311_128350382_128350483_128350576_128352637_128352748_128353024_128353235_128353414_128353542_128355052_128355191_128355397_128355563_128355649_128355797_128360333
transcript_198848.known	chr9	+	3229	13	FSM	ENSG00000167114.13	ENST00000300456.5	3229	13	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_6	13.6554832291729	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTCACTCTAAGTGTG	128340019	True	NA	7	True	NA	NA	NA	128340526	128361470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128340839_128343126_128343294_128345154_128345550_128348544_128348704_128350311_128350382_128350483_128350576_128352637_128352748_128353024_128353235_128353414_128353542_128355052_128355191_128355397_128355563_128355649_128355797_128360333
transcript_198853.nnic	chr9	+	2627	12	NIC	ENSG00000167114.13	novel	3229	13	NA	NA	20	0	combination_of_known_splicesites	FALSE	canonical	1	6	junction_7	53.432122693537	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTAGCCTGTGTGCAAAC	128339894	True	NA	15	True	AATAAA	-15	NA	128340665	128361217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_128340839_128343126_128343294_128345154_128345550_128348544_128348704_128350311_128350382_128350483_128350576_128352637_128352748_128353414_128353542_128355052_128355191_128355397_128355563_128355649_128355797_128360333
transcript_198858.nnic	chr9	+	2700	11	NIC	ENSG00000167114.13	novel	3229	13	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_4	56.3259265347673	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTAGCCTGTGTGCAAAC	128340133	False	NA	15	True	AATAAA	-15	NA	128340640	128361217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_128340839_128343126_128343294_128345154_128345550_128348544_128348704_128352637_128352748_128353024_128353235_128353414_128353542_128355052_128355191_128355397_128355563_128355649_128355797_128360333
transcript_198863.known	chr9	+	2595	5	FSM	ENSG00000167118.11	ENST00000372853.9	2595	5	0	0	0	0	multi-exon	FALSE	canonical	3	558	junction_1	34.237223894469	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTTTCTTTAATGAAAAG	128363568	True	NA	14	True	AATAAA	-26	NA	128371373	128392016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128371416_128378035_128378107_128387815_128387898_128389260_128389310_128389665
transcript_198864.known	chr9	+	723	5	FSM	ENSG00000167118.11	ENST00000470840.5	723	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	238.022582962205	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTCCAGCCCCAGAGCCAG	128363555	True	NA	NA	False	NA	NA	NA	128371360	128390090	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128371416_128377994_128378107_128387815_128387898_128389260_128389310_128389665
transcript_198865.known	chr9	+	803	4	FSM	ENSG00000167118.11	ENST00000483206.2	803	4	0	0	0	0	multi-exon	FALSE	canonical	3	558	junction_1	37.6150088247881	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGAAAAGAGGCCAGGTG	128363569	True	NA	NA	False	NA	NA	NA	128371374	128389869	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128371416_128378035_128378107_128387815_128387898_128389260
transcript_198870.known	chr9	+	3045	3	FSM	ENSG00000167118.11	ENST00000372850.5	3045	3	0	0	0	0	multi-exon	FALSE	canonical	3	558	junction_1	45.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGCTTGGAGCTTCATC	128363555	True	NA	18	True	AATAAA	-19	NA	128371360	128390734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128371416_128378035_128378107_128387815
transcript_198872.known	chr9	+	753	3	FSM	ENSG00000167118.11	ENST00000372847.1	753	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	295	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCAGTGCAGTCTCCTT	128363565	True	NA	NA	False	NA	NA	NA	128371370	128388411	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128371416_128377994_128378107_128387815
transcript_198875.known	chr9	+	2308	13	FSM	ENSG00000167123.20	ENST00000372838.9	2308	13	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_1	9.07798007390533	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATATGTATGTATATA	128420151	True	NA	NA	False	AATAAA	-19	NA	128420856	128437347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128421075_128422867_128422979_128423145_128423264_128424137_128424273_128424409_128424615_128428301_128428422_128428756_128428834_128428929_128429037_128431170_128431304_128434101_128434230_128434409_128434614_128435652_128435906_128436848
transcript_198885.nic	chr9	+	3703	22	NIC	ENSG00000136811.17	novel	3653	23	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	28.0497614187048	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGGCTCCATTTGATGA	128454212	True	NA	26	True	AAAAAG	-17	NA	128456109	128500960	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_128456256_128457197_128457438_128459566_128459658_128460512_128460667_128460941_128461068_128469182_128469354_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509_128494669_128496040_128496142_128498412_128498576_128499000_128499127_128500066
transcript_198887.nic	chr9	+	3666	22	NIC	ENSG00000136811.17	novel	3653	23	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	33.0468642702335	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGGCTCCATTTGATGA	128454212	True	NA	26	True	AAAAAG	-17	NA	128456109	128500960	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_128456256_128457197_128457438_128459566_128459658_128460549_128460667_128460941_128461068_128469182_128469354_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509_128494669_128496040_128496142_128498412_128498576_128499000_128499127_128500066
transcript_198896.known	chr9	+	3030	21	FSM	ENSG00000136811.17	ENST00000604420.5	3030	21	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	33.5125349682772	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCGACAGGCCTTAAATTTA	128454254	True	NA	NA	False	NA	NA	NA	128456151	128500483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128456256_128457197_128457438_128459566_128459658_128460941_128461068_128469182_128469354_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509_128494669_128496040_128496142_128498412_128498576_128499000_128499127_128500066
transcript_198898.nic	chr9	+	3402	21	NIC	ENSG00000136811.17	novel	3387	21	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_4	21.9342198402405	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGGCTCCATTTGATGA	128454216	True	NA	26	True	AAAAAG	-17	NA	128456113	128500960	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_128456256_128459566_128459658_128460512_128460667_128460941_128461011_128469182_128469354_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509_128494669_128496040_128496142_128498412_128498576_128499000_128499127_128500066
transcript_198901.known	chr9	+	3899	21	FSM	ENSG00000136811.17	ENST00000444119.7	3791	21	-76	-32	0	0	multi-exon	FALSE	canonical	3	70	junction_4	16.6826256926181	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTCGTACTGTGCTA	NA	False	NA	35	True	NA	NA	NA	128456005	128501292	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128456256_128459566_128459658_128460512_128460667_128460941_128461068_128469182_128469354_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509_128494669_128496040_128496142_128498412_128498576_128499000_128499127_128500066
transcript_198904.nic	chr9	+	3422	21	FSM	ENSG00000136811.17	ENST00000351030.8	3862	21	108	332	13	0	multi-exon	FALSE	canonical	3	12	junction_2	25.3306138891263	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGGCTCCATTTGATGA	128454216	True	NA	26	True	AAAAAG	-17	NA	128456113	128500960	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128456256_128459566_128459658_128460549_128460667_128460941_128461068_128469182_128469354_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509_128494669_128496040_128496142_128498412_128498576_128499000_128499127_128500066
transcript_198908.nic	chr9	+	3231	20	NIC	ENSG00000136811.17	novel	3387	21	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_4	26.9128067836684	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGGCTCCATTTGATGA	128454216	True	NA	26	True	AAAAAG	-17	NA	128456113	128500960	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_128456256_128459566_128459658_128460512_128460667_128460941_128461011_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509_128494669_128496040_128496142_128498412_128498576_128499000_128499127_128500066
transcript_198917.nic	chr9	+	3248	20	NIC	ENSG00000136811.17	novel	3387	21	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_2	29.1219615180585	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGGCTCCATTTGATGA	128454216	True	NA	26	True	AAAAAG	-17	NA	128456113	128500960	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_128456256_128459566_128459658_128460941_128461011_128469182_128469354_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509_128494669_128496040_128496142_128498412_128498576_128499000_128499127_128500066
transcript_198918.nic	chr9	+	3305	20	NIC	ENSG00000136811.17	novel	3862	21	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_2	25.433635329897	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGGCTCCATTTGATGA	128454216	True	NA	26	True	AAAAAG	-17	NA	128456113	128500960	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_128456256_128459566_128459658_128460941_128461068_128469182_128469354_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509_128494669_128496040_128496142_128498412_128498576_128499000_128499127_128500066
transcript_198933.nic	chr9	+	2286	17	NIC	ENSG00000136811.17	novel	3791	21	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_4	23.0295326700305	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCATGTGTTTGCACAAAG	128454216	True	NA	8	True	AATAAA	-17	NA	128456113	128494836	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_128456256_128459566_128459658_128460512_128460667_128460941_128461011_128469182_128469354_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509
transcript_198934.nic	chr9	+	2343	17	ISM	ENSG00000136811.17	ENST00000372807.10	2780	21	-44	5489	13	0	5prime_fragment	FALSE	canonical	3	70	junction_4	16.87407404867	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCATGTGTTTGCACAAAG	128454216	True	NA	8	True	AATAAA	-17	NA	128456113	128494836	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_128456256_128459566_128459658_128460512_128460667_128460941_128461068_128469182_128469354_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509
transcript_198940.known	chr9	+	2249	16	FSM	ENSG00000136811.17	ENST00000372814.7	2249	16	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	27.1825107171668	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGTTTGCACAAAGTGA	NA	False	NA	11	True	AATAAA	-20	NA	128456056	128494839	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128456256_128459566_128459658_128460941_128461068_128469182_128469354_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509
transcript_198954.known	chr9	+	3600	17	FSM	ENSG00000119392.16	ENST00000683288.1	3600	17	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	42.9105173588014	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTATCTAGCAAGAGAT	128502636	True	NA	NA	False	NA	NA	NA	128504736	128542479	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128504905_128507215_128507341_128508875_128509098_128515528_128515640_128522667_128522817_128523279_128523341_128523591_128523847_128525191_128525424_128527178_128527292_128527455_128527526_128533512_128533656_128533760_128533952_128536354_128536485_128537985_128538091_128539615_128539699_128540274_128540339_128541101
transcript_198956.known	chr9	+	3373	17	FSM	ENSG00000119392.16	ENST00000683748.1	3373	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	50.2670602258576	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTTGGTTTTTTGAAAAA	NA	False	NA	-3	True	NA	NA	NA	128504654	128542268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128504905_128508875_128509098_128515528_128515640_128522667_128522817_128523279_128523341_128523591_128523847_128525191_128525424_128527178_128527292_128527455_128527526_128532664_128532692_128533512_128533656_128533760_128533952_128536354_128536485_128537985_128538091_128539615_128539699_128540274_128540339_128541101
transcript_198958.known	chr9	+	3302	16	FSM	ENSG00000119392.16	ENST00000309971.9	3302	16	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	16.8715407977128	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTGCTGATATATTGGT	128502618	True	NA	17	True	AATAAA	-19	NA	128504718	128542288	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128504905_128508875_128509098_128515528_128515640_128522667_128522817_128523279_128523341_128523591_128523847_128525191_128525424_128527178_128527292_128527455_128527526_128533512_128533656_128533760_128533952_128536354_128536485_128537985_128538091_128539615_128539699_128540274_128540339_128541101
transcript_198961.known	chr9	+	3217	15	FSM	ENSG00000119392.16	ENST00000684314.1	3217	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	39.4280538268303	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCATTGCTGATATATTG	128502596	True	NA	15	True	AATAAA	-17	NA	128504696	128542286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128504905_128508875_128509098_128515528_128515640_128522667_128522817_128523279_128523341_128523591_128523847_128525191_128525424_128527178_128527292_128527455_128527526_128533512_128533656_128533760_128533952_128536354_128536485_128539615_128539699_128540274_128540339_128541101
transcript_198965.known	chr9	+	3060	13	FSM	ENSG00000119392.16	ENST00000684139.1	3060	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	43.0338206788826	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGAAAGACACAATAGGCC	128502625	True	NA	NA	False	ATTAAA	-4	NA	128504725	128542518	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128504905_128508875_128509098_128515528_128515640_128525191_128525424_128527178_128527292_128527455_128527526_128533512_128533656_128533760_128533952_128536354_128536485_128537985_128538091_128539615_128539699_128540274_128540339_128541101
transcript_198967.known	chr9	-	822	4	FSM	ENSG00000228395.2	ENST00000434999.2	822	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCCATCCTAATAATTTGC	-128552369	True	NA	NA	False	AGTAAA	-19	NA	128552410	128528656	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128529001_128536826_128536956_128543378_128543685_128552367
transcript_198968.known	chr9	+	7875	57	FSM	ENSG00000197694.18	ENST00000372739.7	7875	57	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	152.705163724287	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGCTTTTCTTCATTTG	128543262	True	NA	17	True	AATAAA	-18	NA	128552586	128633662	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128552697_128566737_128566978_128568771_128568898_128574674_128574816_128575198_128575346_128576822_128576957_128577128_128577274_128577351_128577507_128578109_128578246_128579636_128579739_128580921_128581060_128581781_128581893_128582478_128582557_128582693_128582850_128583076_128583282_128583787_128583970_128584281_128584526_128584720_128584844_128585747_128585966_128587605_128587699_128588808_128588944_128591476_128591626_128592982_128593043_128594174_128594374_128598399_128598505_128598962_128598987_128600079_128600116_128603542_128603591_128604325_128604418_128605033_128605179_128605295_128605478_128607603_128607704_128607851_128608050_128608129_128608277_128608873_128608978_128609121_128609285_128609650_128609666_128611713_128611846_128612108_128612247_128613380_128613486_128615631_128615841_128617639_128617761_128617986_128618109_128618870_128619004_128621157_128621257_128624327_128624488_128625102_128625180_128625768_128625979_128626390_128626688_128627385_128627499_128627924_128627943_128630320_128630376_128632126_128632324_128632430_128632485_128632571_128632719_128632807_128632956_128633208
transcript_198969.known	chr9	+	7812	56	FSM	ENSG00000197694.18	ENST00000630804.2	7812	56	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	140.097680209203	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTTTGCTTTTCTTCAT	128543262	True	NA	14	True	AATAAA	-15	NA	128552586	128633659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128552697_128566737_128566978_128568771_128568898_128574674_128574816_128575198_128575346_128576822_128576957_128577128_128577274_128577351_128577507_128578109_128578246_128579636_128579739_128580921_128581060_128581781_128581893_128582478_128582557_128582693_128582850_128583076_128583282_128583787_128583970_128584281_128584526_128584720_128584844_128585747_128585966_128587605_128587699_128588808_128588944_128591476_128591626_128594174_128594374_128598399_128598505_128598962_128598987_128600079_128600116_128603542_128603591_128604325_128604418_128605033_128605179_128605295_128605478_128607603_128607704_128607851_128608050_128608129_128608277_128608873_128608978_128609121_128609285_128609650_128609666_128611713_128611846_128612108_128612247_128613380_128613486_128615631_128615841_128617639_128617761_128617986_128618109_128618870_128619004_128621157_128621257_128624327_128624488_128625102_128625180_128625768_128625979_128626390_128626688_128627385_128627499_128627924_128627943_128630320_128630376_128632126_128632324_128632430_128632485_128632571_128632719_128632807_128632956_128633208
transcript_198970.known	chr9	+	7794	55	FSM	ENSG00000197694.18	ENST00000358161.9	7794	55	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	141.2026775919	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGCTTTTCTTCATTTG	128543268	True	NA	17	True	AATAAA	-18	NA	128552592	128633662	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128552697_128566737_128566978_128568771_128568898_128574674_128574816_128575198_128575346_128576822_128576957_128577128_128577274_128577351_128577507_128578109_128578246_128579636_128579739_128580921_128581060_128581781_128581893_128582478_128582557_128582693_128582850_128583076_128583282_128583787_128583970_128584281_128584526_128584720_128584844_128585747_128585966_128587605_128587699_128588808_128588944_128591476_128591626_128594174_128594374_128598399_128598505_128598962_128598987_128600079_128600116_128603542_128603591_128604325_128604418_128605033_128605179_128605295_128605478_128607603_128607704_128607851_128608050_128608129_128608277_128608873_128608978_128609121_128609285_128611713_128611846_128612108_128612247_128613380_128613486_128615631_128615841_128617639_128617761_128617986_128618109_128618870_128619004_128621157_128621257_128624327_128624488_128625102_128625180_128625768_128625979_128626390_128626688_128627385_128627499_128627924_128627943_128630320_128630376_128632126_128632324_128632430_128632485_128632571_128632719_128632807_128632956_128633208
transcript_198973.nnic	chr9	-	1636	9	NNC	ENSG00000119333.12	novel	1823	9	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_4	178.741258527515	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATCATTTATTTGTCTTT	NA	False	NA	-10	True	AAGAAA	-19	NA	128656744	128633652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_128633983_128634225_128634384_128634688_128634922_128635091_128635176_128635657_128635768_128636280_128636439_128636917_128637028_128640690_128640940_128656540
transcript_198976.known	chr9	-	1823	9	FSM	ENSG00000119333.12	ENST00000372715.7	1823	9	0	0	0	0	multi-exon	FALSE	canonical	3	479	junction_5	43.8463225367875	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATCATTTATTTGTCTTT	NA	False	NA	-10	True	AAGAAA	-19	NA	128656847	128633652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128633983_128634225_128634384_128634688_128634922_128635091_128635260_128635657_128635768_128636280_128636439_128636917_128637028_128640690_128640940_128656540
transcript_198989.nic	chr9	-	2233	8	NIC	ENSG00000119333.12	novel	1823	9	NA	NA	-45	0	intron_retention	FALSE	canonical	3	532	junction_5	33.5553152819858	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATCATTTATTTGTCTTT	NA	False	NA	-10	True	AAGAAA	-19	NA	128656744	128633652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_128633983_128634225_128634384_128634688_128634922_128635091_128635260_128635657_128636439_128636917_128637028_128640690_128640940_128656540
transcript_198991.nnic	chr9	-	1610	8	NIC	ENSG00000119333.12	novel	1823	9	NA	NA	-45	0	combination_of_known_splicesites	FALSE	canonical	3	41	junction_4	190.232725354809	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATCATTTATTTGTCTTT	NA	False	NA	-10	True	AAGAAA	-19	NA	128656744	128633652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_128633983_128634225_128634384_128634688_128634922_128635091_128635260_128636280_128636439_128636917_128637028_128640690_128640940_128656540
transcript_198993.nic	chr9	-	2118	8	NIC	ENSG00000119333.12	novel	1823	9	NA	NA	-45	0	intron_retention	FALSE	canonical	3	479	junction_4	45.5864283419922	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATCATTTATTTGTCTTT	NA	False	NA	-10	True	AAGAAA	-19	NA	128656744	128633652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_128633983_128634225_128634384_128634688_128634922_128635091_128635768_128636280_128636439_128636917_128637028_128640690_128640940_128656540
transcript_199002.nic	chr9	-	2631	7	NIC	ENSG00000119333.12	novel	1823	9	NA	NA	-45	0	intron_retention	FALSE	canonical	3	532	junction_4	32.0052079095471	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATCATTTATTTGTCTTT	NA	False	NA	-10	True	AAGAAA	-19	NA	128656744	128633652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_128633983_128634225_128634384_128634688_128634922_128635091_128636439_128636917_128637028_128640690_128640940_128656540
transcript_199014.known	chr9	+	2927	8	FSM	ENSG00000119335.18	ENST00000322030.13	2927	8	0	0	0	0	multi-exon	FALSE	canonical	3	4659	junction_1	683.221032749898	1199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTCATTCTCCTTGTT	128642211	True	NA	19	True	AATAAA	-24	NA	128689221	128696396	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128689656_128691169_128691228_128691857_128692001_128692661_128692766_128692867_128692982_128693637_128693809_128693895_128694043_128694640
transcript_199028.known	chr9	+	2850	8	FSM	ENSG00000119335.18	ENST00000372692.8	2850	8	0	0	0	0	multi-exon	FALSE	canonical	3	1766	junction_1	1641.96654120874	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCATTCTCCTTGTTTTAT	128683632	True	NA	23	True	AATAAA	-28	NA	128683654	128696400	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128684008_128691169_128691228_128691857_128692001_128692661_128692766_128692867_128692982_128693637_128693809_128693895_128694043_128694640
transcript_199035.nnic	chr9	+	3366	22	NNC	ENSG00000160447.7	novel	3393	22	NA	NA	-19	-2	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_21	34.8906942352497	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCACTGGCAGCAGCCTG	128702453	False	NA	23	True	ATTAAA	-11	NA	128702483	128720914	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_128702940_128705302_128705544_128705733_128705880_128706712_128706825_128706895_128707024_128707221_128707406_128713051_128713199_128713277_128713388_128713498_128713643_128714045_128714122_128714196_128714366_128714561_128714665_128714797_128714866_128715171_128715236_128715368_128715461_128716746_128716924_128718324_128718388_128718548_128718626_128719685_128719829_128719909_128720018_128720202_128720240_128720393
transcript_199037.known	chr9	+	3393	22	FSM	ENSG00000160447.7	ENST00000291906.5	3393	22	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	18.3129757102738	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACTGGCAGCAGCCTGGG	128701880	True	NA	25	True	ATTAAA	-13	NA	128702502	128720916	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128702940_128705302_128705544_128705733_128705880_128706712_128706825_128706895_128707024_128707221_128707406_128713051_128713199_128713277_128713388_128713498_128713643_128714045_128714122_128714196_128714366_128714561_128714665_128714797_128714866_128715171_128715236_128715368_128715461_128716746_128716924_128718324_128718388_128718548_128718626_128719685_128719829_128719909_128720018_128720202_128720284_128720393
transcript_199052.nnic	chr9	+	3076	22	NNC	ENSG00000160447.7	novel	752	8	NA	NA	847	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	36.5061421229142	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACTGGCAGCAGCCTGGG	128702950	False	NA	25	True	ATTAAA	-13	NA	128703349	128720916	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_128703470_128705302_128705544_128705733_128705880_128706712_128706825_128706895_128707024_128707221_128707406_128713051_128713199_128713277_128713388_128713498_128713643_128714045_128714122_128714196_128714366_128714561_128714665_128714797_128714866_128715171_128715236_128715368_128715461_128716746_128716924_128718324_128718388_128718548_128718626_128719685_128719829_128719909_128720018_128720202_128720284_128720393
transcript_19906.nnic	chr1	-	4478	15	NNC	ENSG00000154380.18	novel	13168	15	NA	NA	-192	0	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_9	105.747581629124	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	-225652580	True	NA	3	True	NA	NA	NA	225653334	225495479	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_225497813_225498346_225498405_225500991_225501071_225504990_225505054_225507950_225508018_225511810_225511860_225512656_225512715_225512870_225513017_225514595_225514664_225517195_225517307_225519197_225519566_225530553_225530639_225554905_225555084_225567248_225567415_225652685
transcript_199073.known	chr9	-	1187	5	FSM	ENSG00000160446.19	ENST00000372667.9	1187	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	192.042963942968	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATATCACTCCTTGCTGC	-128717795	True	NA	-12	True	TATAAA	-25	NA	128724123	128720869	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128721503_128721650_128721818_128722008_128722087_128722437_128722575_128723951
transcript_199074.known	chr9	-	1146	5	FSM	ENSG00000160446.19	ENST00000372663.9	1146	5	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_1	55.8949908310217	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACCATATCACTCCTTGC	-128717799	True	NA	-15	True	TATAAA	-22	NA	128724127	128720872	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128721503_128721650_128721818_128722008_128722087_128722437_128722575_128723993
transcript_199078.known	chr9	-	644	5	FSM	ENSG00000160446.19	ENST00000452105.5	644	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	215.075568115023	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTCGTCTCGCACCTCTA	-128717793	True	NA	NA	False	NA	NA	NA	128724121	128721396	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128721531_128721650_128721818_128722008_128722087_128722437_128722575_128723993
transcript_199079.nic	chr9	-	1147	5	NIC	ENSG00000160446.19	novel	1146	5	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	204.449718757449	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGACAAACCATATCAC	-128717829	True	NA	-22	True	TATAAA	-15	NA	128724157	128720879	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_128721481_128721650_128721818_128722008_128722087_128722437_128722575_128723993
transcript_199082.known	chr9	-	4293	16	FSM	ENSG00000160445.11	ENST00000291900.7	4293	16	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_15	18.7434136580175	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGCGTCTTTTTTTGTGG	-128770674	True	NA	-1	True	AATACA	-21	NA	128771927	128729785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128731395_128733425_128733529_128735333_128735432_128739930_128740120_128740771_128740888_128741534_128741655_128741799_128741842_128742529_128742746_128750615_128750790_128751121_128751269_128751412_128751528_128752672_128752850_128753163_128753601_128753808_128753960_128755407_128755660_128771580
transcript_19909.known	chr1	-	13168	15	FSM	ENSG00000154380.18	ENST00000366844.7	13168	15	0	0	0	0	multi-exon	TRUE	canonical	3	338	junction_9	56.72346093468	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAATGAGATTTGTATTT	-225640912	True	NA	-8	True	AATAAA	-17	NA	225653142	225486834	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_225497813_225498346_225498405_225500991_225501071_225504990_225505054_225507950_225508018_225511810_225511860_225512656_225512715_225512870_225513017_225514595_225514901_225517195_225517307_225519197_225519566_225530553_225530639_225554905_225555084_225567248_225567415_225652685
transcript_199093.nnic	chr9	+	744	3	NNC	ENSG00000223478.2	novel	559	2	NA	NA	-8	-8	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	5.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGAGGGCCCTGATGCTC	128723652	True	NA	5	True	AATAAA	-17	NA	128724426	128733191	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_128724636_128730063_128730249_128732841
transcript_199094.known	chr9	+	544	2	FSM	ENSG00000223478.2	ENST00000443631.2	559	2	10	5	10	-5	multi-exon	FALSE	canonical	3	53	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGGCCCTGATGCTCCGT	128723670	True	NA	8	True	AATAAA	-20	NA	128724444	128733194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128724636_128732841
transcript_199098.known	chr9	+	3855	12	FSM	ENSG00000107021.16	ENST00000372648.10	3855	12	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_9	22.3935498387407	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGTGCTGTGATGAGCT	128783678	True	NA	28	True	AATAAA	-22	NA	128787252	128810430	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128787377_128788333_128788408_128790734_128790776_128791379_128791442_128791593_128791694_128792491_128792575_128797054_128797215_128803249_128803461_128803955_128804120_128805858_128806020_128806253_128806312_128807813
transcript_199102.nic	chr9	+	3815	11	NIC	ENSG00000107021.16	novel	3855	12	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_2	66.1408345880213	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGCATTGGTGCTGTGA	128783671	True	NA	22	True	AATAAA	-16	NA	128787245	128810424	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_128787377_128788333_128788408_128791379_128791442_128791593_128791694_128792491_128792575_128797054_128797215_128803249_128803461_128803955_128804120_128805858_128806020_128806253_128806312_128807813
transcript_199105.known	chr9	+	3378	10	FSM	ENSG00000107021.16	ENST00000223865.8	3378	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	71.3675930190541	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGCATTGGTGCTGTGA	128783774	True	NA	22	True	AATAAA	-16	NA	128787348	128810424	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128787377_128788333_128788408_128790734_128790776_128791379_128791442_128791593_128791694_128792491_128792575_128797054_128797215_128805858_128806020_128806253_128806312_128807813
transcript_199117.known	chr9	-	1971	13	FSM	ENSG00000171097.14	ENST00000302586.8	1971	13	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_12	17.5760253375633	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGTTGTTGTTGTTGTT	-128879669	True	NA	-5	True	AATGAA	-15	NA	128881950	128832941	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128833644_128833739_128833827_128835322_128835403_128835480_128835668_128835778_128835869_128835996_128836074_128836801_128836923_128837684_128837814_128838050_128838138_128838217_128838368_128842653_128842802_128845352_128845412_128881896
transcript_199122.known	chr9	-	2089	13	FSM	ENSG00000171097.14	ENST00000462722.5	2089	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_6	50.7074260395413	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGTTGTTGTTGTTGTT	-128879755	True	NA	-5	True	AATGAA	-15	NA	128882036	128832941	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128833644_128833739_128833827_128835322_128835403_128835480_128835668_128835778_128835869_128835996_128836106_128836801_128836923_128837684_128837814_128838050_128838138_128838217_128838368_128842653_128842802_128845352_128845412_128881896
transcript_19913.known	chr1	-	3308	15	FSM	ENSG00000154380.18	ENST00000635051.1	3308	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	189.542857681209	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGTCACACTAATATGTA	-225652619	False	NA	NA	False	NA	NA	NA	225652699	225496884	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_225497813_225498346_225498405_225500991_225501071_225507950_225508018_225511810_225511860_225512656_225512715_225512870_225513017_225514595_225514901_225517195_225517991_225519197_225519566_225530553_225530639_225531045_225531058_225554905_225555084_225567248_225567415_225652685
transcript_199151.known	chr9	+	4334	4	FSM	ENSG00000136802.12	ENST00000372600.9	4334	4	0	0	0	0	multi-exon	FALSE	canonical	3	733	junction_3	21.7408984788271	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCCTTTGGAGGTCTTTG	128876362	True	NA	15	True	AATAAA	-15	NA	128882132	128918039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128882251_128886014_128886122_128907156_128909322_128916095
transcript_199156.known	chr9	+	4619	4	FSM	ENSG00000136802.12	ENST00000259324.5	4619	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	358.684943772232	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGTGGCCTTTGGAGGT	128876731	False	NA	10	True	AATAAA	-10	NA	128882501	128918034	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128882910_128886014_128886122_128907156_128909322_128916095
transcript_199159.known	chr9	+	1145	3	FSM	ENSG00000167136.7	ENST00000372642.5	1145	3	0	0	0	0	multi-exon	TRUE	canonical	3	183	junction_1	24.5	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAAGTCTGGTGGCGTCCG	128817161	True	NA	26	True	ATTAAA	-17	NA	128818499	128822676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128819186_128820738_128820849_128822327
transcript_199162.known	chr9	+	4161	3	FSM	ENSG00000136802.12	ENST00000372599.7	4161	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	351	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGGCCTTTGGAGGTCT	128876425	True	NA	12	True	AATAAA	-12	NA	128882195	128918036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128882251_128907156_128909322_128916095
transcript_199167.known	chr9	+	717	2	FSM	ENSG00000136802.12	ENST00000492784.1	717	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCTTCATCCAGATAACT	128912729	False	NA	NA	False	NA	NA	NA	128912743	128916739	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128912817_128916095
transcript_199168.known	chr9	-	4259	12	FSM	ENSG00000198917.13	ENST00000361256.10	4259	12	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_2	66.4205235632272	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCACTTGAATTATCCTGAA	-128822289	True	NA	-14	True	AATAAA	-17	NA	128829794	128819650	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128822834_128823746_128823895_128824071_128824175_128824770_128824870_128824976_128825050_128826021_128826153_128826383_128826434_128826539_128826630_128827031_128827192_128828734_128828861_128829109_128829156_128829744
transcript_199173.known	chr9	+	5689	44	FSM	ENSG00000095319.14	ENST00000372577.2	5689	44	0	0	0	0	multi-exon	FALSE	canonical	3	475	junction_1	80.0905247699327	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGATGTTTAACTTC	128934284	True	NA	32	True	ATTAAA	-17	NA	128947698	129007096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128947752_128949188_128949244_128952772_128952847_128956349_128956435_128956951_128957033_128958009_128958055_128958801_128958895_128959014_128959135_128968505_128968718_128969399_128969515_128970757_128970959_128973159_128973250_128979261_128979328_128980605_128980726_128981263_128981391_128982548_128982702_128982901_128983029_128983292_128983381_128983473_128983551_128984899_128985015_128986557_128986679_128986808_128986876_128987588_128987718_128988046_128988187_128990119_128990227_128993196_128993404_128993524_128993695_128994372_128994443_128994855_128994924_128995318_128995515_128998150_128998229_128998537_128998624_128999171_128999318_128999623_128999806_129001528_129001730_129001883_129001977_129002816_129002976_129003316_129003455_129005146_129005222_129005302_129005531_129005644_129005777_129006049_129006124_129006238_129006369_129006501
transcript_199176.nic	chr9	+	5699	44	NIC	ENSG00000095319.14	novel	5689	44	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_24	120.034599302642	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGATGTTTAACTTC	128934241	True	NA	32	True	ATTAAA	-17	NA	128947655	129007096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_128947752_128949188_128949244_128952772_128952847_128956349_128956435_128956951_128957033_128958009_128958055_128958801_128958895_128959014_128959135_128968505_128968718_128969399_128969515_128970757_128970959_128973159_128973250_128979261_128979328_128980605_128980726_128981263_128981391_128982548_128982702_128982901_128983029_128983292_128983381_128983473_128983551_128984899_128985015_128986557_128986679_128986808_128986876_128987588_128987718_128988046_128988187_128990152_128990227_128993196_128993404_128993524_128993695_128994372_128994443_128994855_128994924_128995318_128995515_128998150_128998229_128998537_128998624_128999171_128999318_128999623_128999806_129001528_129001730_129001883_129001977_129002816_129002976_129003316_129003455_129005146_129005222_129005302_129005531_129005644_129005777_129006049_129006124_129006238_129006369_129006501
transcript_199188.nnic	chr9	+	5340	41	NNC	ENSG00000095319.14	novel	5689	44	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	129.943824401162	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGATGTTTAACTTC	128934241	True	NA	32	True	ATTAAA	-17	NA	128947655	129007096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_128947752_128949188_128949244_128952772_128952847_128956349_128956435_128956951_128957033_128958009_128958055_128958801_128958895_128959014_128959135_128968505_128968718_128969399_128969515_128980640_128980726_128981263_128981391_128982548_128982702_128982901_128983029_128983292_128983381_128983473_128983551_128984899_128985015_128986557_128986679_128986808_128986876_128987588_128987718_128988046_128988187_128990119_128990227_128993196_128993404_128993524_128993695_128994372_128994443_128994855_128994924_128995318_128995515_128998150_128998229_128998537_128998624_128999171_128999318_128999623_128999806_129001528_129001730_129001883_129001977_129002816_129002976_129003316_129003455_129005146_129005222_129005302_129005531_129005644_129005777_129006049_129006124_129006238_129006369_129006501
transcript_199197.known	chr9	+	2047	13	FSM	ENSG00000175287.19	ENST00000372592.8	2047	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	28.4848887814028	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCCTACTGAGCCTTCT	128920967	False	NA	11	True	AATAAA	-18	NA	128920981	128942038	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_128921669_128921929_128922048_128922282_128922357_128927037_128927197_128933781_128933858_128934010_128934059_128936447_128936504_128936582_128936646_128937756_128937779_128940368_128940498_128940598_128940716_128941444_128941572_128941667
transcript_199198.known	chr9	-	1985	13	FSM	ENSG00000148341.18	ENST00000372554.8	1985	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	263.36645361338	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCACCTGGGCTCCTGTCA	-129025338	True	NA	-11	True	AATAAA	-16	NA	129028279	129008038	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_129008792_129009105_129009347_129009452_129009468_129009770_129009872_129010119_129010210_129010669_129010694_129012235_129012299_129013007_129013020_129014410_129014504_129014770_129014905_129021090_129021220_129022281_129022424_129028091
transcript_199199.known	chr9	-	1365	12	FSM	ENSG00000148341.18	ENST00000372559.5	1365	12	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	163.764495289288	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGCTCCTGTCAGGGCC	-129025273	True	NA	-6	True	AATAAA	-21	NA	129028214	129008033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_129008151_129008683_129008792_129009105_129009347_129009770_129009872_129010119_129010210_129010669_129010694_129012235_129012299_129014410_129014504_129014770_129014905_129021090_129021220_129022281_129022424_129028091
transcript_199207.known	chr9	-	3013	11	FSM	ENSG00000148341.18	ENST00000372564.8	3013	11	0	0	0	0	multi-exon	FALSE	canonical	3	407	junction_5	66.1589752036713	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGAGTGTGGAAAACAGG	-129025390	True	NA	3	True	TATAAA	-29	NA	129028331	129007035	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_129008792_129009105_129009347_129009770_129009872_129010119_129010210_129010669_129010694_129012235_129012299_129014410_129014504_129014770_129014905_129021090_129021220_129022281_129022424_129028091
transcript_199208.nnic	chr9	-	2092	11	NNC	ENSG00000148341.18	novel	1985	13	NA	NA	-10	0	intron_retention	FALSE	canonical	3	16	junction_5	170.701611005872	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCACCTGGGCTCCTGTCA	-129025400	True	NA	-11	True	AATAAA	-16	NA	129028341	129008038	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_129008792_129009105_129009347_129009770_129009872_129010119_129010210_129010669_129010766_129012235_129012299_129014410_129014504_129014770_129014905_129021090_129021220_129022281_129022424_129028091
transcript_199212.known	chr9	-	1415	10	FSM	ENSG00000148341.18	ENST00000416629.5	1415	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	182.907248977166	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGCACCCCACCCTCCAGG	-129025269	True	NA	NA	False	NA	NA	NA	129028210	129008449	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_129008792_129009105_129009347_129009770_129009872_129010119_129010210_129010669_129010694_129014410_129014504_129014770_129014905_129021090_129021220_129022281_129022424_129028091
transcript_199214.nic	chr9	-	3562	10	NIC	ENSG00000148341.18	novel	1985	13	NA	NA	-10	0	intron_retention	FALSE	canonical	3	493	junction_5	49.1867190746987	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCACCTGGGCTCCTGTCA	-129025400	True	NA	-11	True	AATAAA	-16	NA	129028341	129008038	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_129008792_129009105_129009347_129009770_129009872_129010119_129010210_129010669_129012299_129014410_129014504_129014770_129014905_129021090_129021220_129022281_129022424_129028091
transcript_199220.known	chr9	-	2074	1	FSM	ENSG00000175283.8	ENST00000372586.4	2074	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	429	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTAGTTTTGCTGATATA	-128945839	True	NA	-5	True	AATAAA	-17	NA	128947603	128945529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_128945500_128947600
transcript_199229.nnic	chr9	+	3753	17	NNC	ENSG00000148343.19	novel	4345	17	NA	NA	-11	0	at_least_one_novel_splicesite	TRUE	canonical	3	19	junction_13	27.8623149388201	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTTCCACTTTGCCAT	129034172	True	NA	6	True	AATAAA	-12	NA	129036609	129072071	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_129036682_129040451_129040691_129042303_129042515_129048426_129048540_129049380_129049499_129049826_129049964_129059153_129059272_129060549_129060651_129061230_129061347_129063243_129063317_129063544_129063632_129067772_129067872_129068197_129068333_129068837_129068976_129069075_129069130_129069848_129069966_129070246
transcript_19923.known	chr1	-	2758	14	FSM	ENSG00000154380.18	ENST00000366843.7	13092	14	78	10256	78	-200	multi-exon	FALSE	canonical	3	80	junction_3	107.390400990275	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTAGATGCCTTCCTAAA	-225652965	False	NA	-5	True	ATTAAA	-26	NA	225653045	225497084	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_225497813_225498346_225498405_225500991_225501071_225507950_225508018_225511810_225511860_225512656_225512715_225512870_225513017_225514595_225514901_225517195_225517307_225519197_225519566_225530553_225530639_225554905_225555084_225567248_225567415_225652685
transcript_199235.known	chr9	+	3610	16	FSM	ENSG00000148343.19	ENST00000684074.1	3610	16	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_13	25.9714373024589	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCATGTTGTTGGTTA	129034188	True	NA	17	True	AATAAA	-23	NA	129036625	129072082	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129036682_129040451_129040691_129042303_129042515_129048426_129048540_129049380_129049499_129049826_129049964_129059153_129059272_129060549_129060651_129061230_129061347_129063243_129063317_129063544_129063632_129067772_129067872_129068197_129068333_129069075_129069130_129069848_129069966_129070246
transcript_199237.nic	chr9	+	4258	16	NIC	ENSG00000148343.19	novel	4345	17	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_1	19.2935222289762	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTTCCACTTTGCCAT	129034172	True	NA	6	True	AATAAA	-12	NA	129036609	129072071	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_129036682_129040451_129040691_129042303_129042515_129048426_129048540_129049380_129049499_129049826_129049964_129059153_129059272_129060549_129060651_129061230_129061347_129063243_129063317_129063544_129063632_129067772_129067872_129068197_129068976_129069075_129069130_129069848_129069966_129070246
transcript_199240.known	chr9	+	3637	16	FSM	ENSG00000148343.19	ENST00000358369.8	3637	16	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	34.404392484423	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCATGTTGTTGGTTA	129036920	True	NA	17	True	AATAAA	-23	NA	129036933	129072082	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129037017_129040451_129040691_129042303_129042515_129048426_129048540_129049380_129049499_129049826_129049964_129059153_129059272_129060549_129060651_129061230_129061347_129063243_129063317_129063544_129063632_129067772_129067872_129068197_129068333_129069075_129069130_129069848_129069966_129070246
transcript_199253.known	chr9	+	2532	2	FSM	ENSG00000148343.19	ENST00000483458.1	2532	2	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTTCCACTTTGCCAT	129069207	False	NA	6	True	AATAAA	-12	NA	129069258	129072071	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129069966_129070246
transcript_199254.known	chr9	-	411	1	FSM	ENSG00000287234.1	ENST00000670830.1	411	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACGTCTATGCTACTTAA	-129080614	True	NA	-3	True	AATAAA	-15	NA	129080765	129080354	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_129080400_129080800
transcript_199263.known	chr9	+	2169	8	FSM	ENSG00000167130.18	ENST00000372546.9	2169	8	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_6	14.4603610195709	2386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGAGCACTTGCTGATTG	129076255	True	NA	17	True	AATAAA	-17	NA	129081110	129090438	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129081208_129084667_129084769_129085022_129085108_129085206_129085307_129085517_129085617_129086138_129086268_129086708_129086799_129088970
transcript_199273.known	chr9	+	2037	7	FSM	ENSG00000167130.18	ENST00000406974.7	2037	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	107.047367500975	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTTGAGCACTTGCTGA	129076255	True	NA	14	True	AATAAA	-14	NA	129081110	129090435	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129081208_129084667_129084769_129085022_129085108_129085206_129085307_129085517_129085617_129086708_129086799_129088970
transcript_19928.nic	chr1	-	2340	14	ISM	ENSG00000154380.18	ENST00000366844.7	13168	15	-192	11554	-192	-755	5prime_fragment	FALSE	canonical	3	338	junction_8	55.1118282174295	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAGAAAAGAATTAACAAAG	-225652580	True	NA	0	True	NA	NA	NA	225653334	225498388	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_225498405_225500991_225501071_225504990_225505054_225507950_225508018_225511810_225511860_225512656_225512715_225512870_225513017_225514595_225514901_225517195_225517307_225519197_225519566_225530553_225530639_225554905_225555084_225567248_225567415_225652685
transcript_199285.known	chr9	+	1932	6	FSM	ENSG00000167130.18	ENST00000327812.12	1932	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	148.134263423423	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGAGCACTTGCTGATTG	129076278	True	NA	17	True	AATAAA	-17	NA	129081133	129090438	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129081208_129084667_129084769_129085206_129085307_129085517_129085617_129086708_129086799_129088970
transcript_199294.known	chr9	-	2253	15	FSM	ENSG00000095321.18	ENST00000458362.5	2253	15	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_14	20.9505004567374	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCTAGGACTCAGGCCTG	-129110105	True	NA	NA	False	NA	NA	NA	129110782	129095396	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_129095613_129095997_129096136_129097249_129097313_129098012_129098149_129098248_129098372_129098530_129098651_129099865_129099967_129100510_129100690_129101882_129102058_129102399_129102566_129103012_129103067_129104187_129104307_129107813_129108078_129109178_129109278_129110482
transcript_199296.known	chr9	-	2768	14	FSM	ENSG00000095321.18	ENST00000318080.7	2768	14	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_12	5.82384407099929	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGTTTCAGCTGAGAGG	-129110116	True	NA	-1	True	AATAAA	-20	NA	129110793	129094793	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_129095613_129095997_129096136_129097249_129097313_129098012_129098149_129098248_129098372_129098530_129098651_129099865_129099967_129100510_129100690_129101882_129102058_129102399_129102566_129103012_129103067_129104187_129104307_129107813_129108078_129110482
transcript_199297.known	chr9	-	2524	14	FSM	ENSG00000095321.18	ENST00000455396.2	2524	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	18.9904990259455	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGGTGAAGAGGTGTT	-129110004	True	NA	-13	True	AATAAA	-8	NA	129110681	129094805	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_129095613_129095997_129096136_129097249_129097313_129098012_129098149_129098248_129098372_129098530_129098651_129099865_129099967_129100510_129100690_129101882_129102058_129102399_129102566_129103012_129103067_129104187_129104307_129107933_129108078_129110482
transcript_199298.known	chr9	-	2623	14	FSM	ENSG00000095321.18	ENST00000681627.1	2623	14	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	18.4281749811557	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTGTGTTGGTGAAGAG	-129110060	True	NA	-18	True	AATAAA	-3	NA	129110737	129094810	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_129095613_129096069_129096136_129097249_129097313_129098012_129098149_129098248_129098372_129098530_129098651_129099865_129099967_129100510_129100690_129101882_129102058_129102399_129102566_129103012_129103067_129104187_129104307_129107813_129108078_129110482
transcript_199311.known	chr9	+	2664	11	FSM	ENSG00000119383.21	ENST00000358994.9	2664	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	219.623063451906	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTGTGAGGTATGTCT	129110659	True	NA	23	True	ATTAAA	-20	NA	129110949	129148944	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129111033_129111471_129111632_129120512_129120611_129123051_129123139_129128984_129129111_129131521_129131640_129134794_129134895_129136470_129136596_129137591_129137693_129142444_129142553_129147386
transcript_199312.known	chr9	+	2746	11	FSM	ENSG00000119383.21	ENST00000337738.6	2746	11	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	273.366804861161	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGAGGTATGTCTT	129100405	True	NA	24	True	ATTAAA	-21	NA	129111412	129148945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129111632_129120512_129120611_129123051_129123139_129127963_129128069_129128984_129129111_129131521_129131640_129134794_129134895_129136470_129136596_129137591_129137693_129142444_129142553_129147386
transcript_199326.known	chr9	+	2640	10	FSM	ENSG00000119383.21	ENST00000393370.7	2640	10	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_6	71.0192114505767	3410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGAGGTATGTCTTT	129100407	True	NA	25	True	ATTAAA	-22	NA	129111414	129148946	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129111632_129120512_129120611_129123051_129123139_129128984_129129111_129131521_129131640_129134794_129134895_129136470_129136596_129137591_129137693_129142444_129142553_129147386
transcript_199337.known	chr9	+	2526	10	FSM	ENSG00000119383.21	ENST00000452489.6	2526	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	228.912889788039	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGAGGTATGTCTT	129110788	False	NA	24	True	ATTAAA	-21	NA	129111687	129148945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129111792_129120512_129120611_129123051_129123139_129128984_129129111_129131521_129131640_129134794_129134895_129136470_129136596_129137591_129137693_129142444_129142553_129147386
transcript_199346.known	chr9	+	2515	9	FSM	ENSG00000119383.21	ENST00000355007.7	2515	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	245.65868089689	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGAGGTATGTCTTT	129100406	True	NA	25	True	ATTAAA	-22	NA	129111413	129148946	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129111632_129120512_129120611_129123051_129123139_129131521_129131640_129134794_129134895_129136470_129136596_129137591_129137693_129142444_129142553_129147386
transcript_199347.known	chr9	+	2653	9	FSM	ENSG00000119383.21	ENST00000357197.8	2653	9	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	222.589553607082	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGAGGTATGTCTT	129111023	False	NA	24	True	ATTAAA	-21	NA	129111313	129148945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129111632_129120512_129120611_129128984_129129111_129131521_129131640_129134794_129134895_129136470_129136596_129137591_129137693_129142444_129142553_129147386
transcript_199377.known	chr9	+	988	3	FSM	ENSG00000119383.21	ENST00000423100.5	988	3	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	338.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGTCGGGTGGTGGAGA	129138938	True	NA	NA	False	NA	NA	NA	129139381	129147998	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129139650_129142444_129142553_129147386
transcript_199378.known	chr9	+	532	3	FSM	ENSG00000119383.21	ENST00000436883.5	532	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	48	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCCTCCCCCTTTGGTCCC	129139564	False	NA	NA	False	NA	NA	NA	129140007	129143654	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129140152_129142444_129142553_129143374
transcript_19938.nic	chr1	-	2325	13	ISM	ENSG00000154380.18	ENST00000366844.7	13168	15	-192	14156	-192	-3357	5prime_fragment	FALSE	canonical	3	338	junction_7	42.7258703831765	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGCTCAGTGGCAGCTT	-225652580	True	NA	NA	False	NA	NA	NA	225653334	225500990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_225501071_225504990_225505054_225507950_225508018_225511810_225511860_225512656_225512715_225512870_225513017_225514595_225514901_225517195_225517307_225519197_225519566_225530553_225530639_225554905_225555084_225567248_225567415_225652685
transcript_199380.known	chr9	+	1153	3	FSM	ENSG00000119383.21	ENST00000414510.5	1153	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	334	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGCAGAAACTCAGGGAG	129139564	False	NA	NA	False	NA	NA	NA	129140007	129148287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129140152_129142444_129142553_129147386
transcript_199382.known	chr9	+	857	3	FSM	ENSG00000119383.21	ENST00000432651.5	857	3	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	327.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGGTGGAGAGGCCTTAG	129140530	False	NA	NA	False	NA	NA	NA	129141953	129148006	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129142083_129142444_129142553_129147386
transcript_199384.known	chr9	+	618	3	FSM	ENSG00000119383.21	ENST00000435132.5	618	3	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	342.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGTCTGGTTTTGAGAG	129141348	True	NA	NA	False	NA	NA	NA	129141993	129147772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129142118_129142444_129142553_129147386
transcript_199385.known	chr9	+	870	3	FSM	ENSG00000119383.21	ENST00000434095.2	870	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	340	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTGGGGTCGGGTGGTGG	129141379	True	NA	NA	False	NA	NA	NA	129142024	129147995	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129142178_129142444_129142553_129147386
transcript_199388.known	chr9	+	530	2	FSM	ENSG00000119383.21	ENST00000435305.1	530	2	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGAGGCATCTCCAAAGT	129138694	True	NA	NA	False	NA	NA	NA	129140117	129142940	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129140152_129142444
transcript_199391.known	chr9	-	973	2	FSM	ENSG00000095321.18	ENST00000393384.3	973	2	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTGGATGCAGTGACTC	-129110034	True	NA	-2	True	AATACA	-16	NA	129110711	129107333	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_129108078_129110482
transcript_199394.known	chr9	+	1112	4	FSM	ENSG00000233901.7	ENST00000654735.1	1112	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	8.28653526310404	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCCCTTGTTGCCGTGTG	NA	False	NA	24	True	ATTAAA	-29	NA	129333772	129347477	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129334199_129338791_129338918_129341735_129342044_129347225
transcript_199395.known	chr9	+	902	4	FSM	ENSG00000233901.7	ENST00000654190.1	902	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	11.4406682011537	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCCCTTGTTGCCGTGTG	129333649	True	NA	24	True	ATTAAA	-29	NA	129333886	129347477	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129334199_129338791_129338918_129341831_129342044_129347225
transcript_199396.known	chr9	+	2226	4	FSM	ENSG00000233901.7	ENST00000665063.2	2229	4	3	0	3	0	multi-exon	FALSE	canonical	2	10	junction_1	8.28653526310404	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCAGTTTGTGTATTGAG	129336437	True	NA	NA	False	AAGAAA	-44	NA	129336878	129348907	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129336989_129338791_129338918_129341735_129342044_129347225
transcript_199397.known	chr9	+	640	4	FSM	ENSG00000233901.7	ENST00000444125.3	643	4	0	3	0	-1	multi-exon	FALSE	canonical	2	3	junction_2	11.4406682011537	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTCTTTCAGCATTTC	129336481	True	NA	8	True	ATTAAA	-13	NA	129336922	129347461	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129336989_129338791_129338918_129341831_129342044_129347225
transcript_199399.known	chr9	+	1997	3	FSM	ENSG00000204054.14	ENST00000663000.1	1997	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCTCTGAATCTCAGTTT	129488663	True	NA	NA	False	CATAAA	-23	NA	129488702	129504545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129489300_129493418_129493596_129503322
transcript_199403.known	chr9	-	4603	6	FSM	ENSG00000148331.12	ENST00000277458.5	4603	6	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_2	15.5357651887508	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACTTTGAATGCAGTAAG	-129639506	True	NA	NA	False	AATAAA	-16	NA	129642151	129634604	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_129638458_129638572_129638660_129639201_129639311_129639401_129639509_129640540_129640723_129641886
transcript_199412.nic	chr9	-	2878	5	NIC	ENSG00000148331.12	novel	2180	5	NA	NA	-2	0	intron_retention	FALSE	canonical	3	162	junction_3	14.8218588577816	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGTCCTTATATAAAATT	-129639526	True	NA	15	True	ATTAAA	-20	NA	129642171	129636891	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_129638458_129638572_129639311_129639401_129639509_129640540_129640723_129641886
transcript_199414.known	chr9	+	576	4	FSM	ENSG00000148335.15	ENST00000481189.1	576	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	268.260238491573	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCCGCCCCAACGGCAT	129618191	True	NA	NA	False	NA	NA	NA	129626174	129635257	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129626296_129632649_129632802_129634053_129634307_129635207
transcript_199416.known	chr9	+	741	4	FSM	ENSG00000148335.15	ENST00000372481.7	741	4	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_3	228.153944130322	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAGGAGAAACTGAGGAAC	129618221	True	NA	NA	False	GGGGCT	-1	NA	129626204	129635473	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129626296_129632649_129632866_129634053_129634222_129635207
transcript_199417.known	chr9	+	1530	4	FSM	ENSG00000148335.15	ENST00000372483.9	1530	4	0	0	0	0	multi-exon	FALSE	canonical	3	576	junction_3	65.5303152916436	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTTGGGAGGCCGAGGC	129618179	True	NA	NA	False	AATAAA	-38	NA	129626162	129636135	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129626296_129632649_129632866_129634053_129634307_129635207
transcript_199420.known	chr9	+	1562	4	FSM	ENSG00000148335.15	ENST00000611055.4	1562	4	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_1	256.916761271471	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCACTTTGGGAGGCCG	129618169	True	NA	NA	False	AATAAA	-34	NA	129626152	129636131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129626322_129632649_129632866_129634053_129634307_129635207
transcript_199428.known	chr9	+	1072	3	FSM	ENSG00000148335.15	ENST00000482347.1	1072	3	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	247.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGATGGTGCTGTGGGGTG	129618216	True	NA	NA	False	NA	NA	NA	129626199	129635930	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129626296_129634053_129634307_129635207
transcript_199429.known	chr9	+	1346	3	FSM	ENSG00000148335.15	ENST00000617943.4	1346	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	284	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCACTTTGGGAGGCCG	129618169	True	NA	NA	False	AATAAA	-34	NA	129626152	129636131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129626322_129634053_129634307_129635207
transcript_19943.nic	chr1	-	2245	12	ISM	ENSG00000154380.18	ENST00000366844.7	13168	15	-192	18156	-192	-7357	5prime_fragment	FALSE	canonical	3	338	junction_6	44.2642328980136	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCATCCTGCTGTGACGT	-225652580	True	NA	NA	False	NA	NA	NA	225653334	225504990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_225505054_225507950_225508018_225511810_225511860_225512656_225512715_225512870_225513017_225514595_225514901_225517195_225517307_225519197_225519566_225530553_225530639_225554905_225555084_225567248_225567415_225652685
transcript_199430.known	chr9	+	1123	2	FSM	ENSG00000148335.15	ENST00000459968.6	1123	2	0	0	0	0	multi-exon	FALSE	canonical	3	716	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGGGCATGGTGGCGC	129618216	True	NA	NA	False	AATACA	-13	NA	129626199	129633676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129626296_129632649
transcript_199431.known	chr9	+	1305	4	FSM	ENSG00000167157.11	ENST00000372469.6	1305	4	0	0	0	0	multi-exon	TRUE	canonical	3	86	junction_1	11.1455023315337	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGCAGGAAGGTGGGTAA	129665005	True	NA	12	True	AATAAA	-23	NA	129665646	129722674	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129666127_129719230_129719419_129720595_129720775_129722216
transcript_199434.known	chr9	-	1751	3	FSM	ENSG00000148344.11	ENST00000340607.5	1751	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	3.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCCCAGCACCTCGTC	-129752781	True	NA	-20	True	ATTAAA	-16	NA	129753042	129738348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_129739861_129748654_129748738_129752886
transcript_199436.known	chr9	+	2738	5	FSM	ENSG00000136816.16	ENST00000259339.7	2738	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	28.4033448734476	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGCCGTTACTGATTTG	129801091	True	NA	15	True	AATAAA	-17	NA	129803183	129811281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129803412_129804072_129804339_129807187_129807364_129808904_129809033_129809341
transcript_199446.known	chr9	-	2285	6	FSM	ENSG00000136827.12	ENST00000651202.1	2285	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	164.211327258506	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATAAAATTTTGCATGTG	-129820624	True	NA	-23	True	TATAAA	-20	NA	129824244	129812964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_129814223_129818177_129818298_129818519_129818648_129818744_129818921_129822580_129822847_129823907
transcript_199448.known	chr9	-	2080	5	FSM	ENSG00000136827.12	ENST00000351698.5	2080	5	0	0	0	0	multi-exon	FALSE	canonical	1	175	junction_3	83.6551701928817	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGAGTACGTTTTTGAA	-129820516	True	NA	0	True	AATAAA	-16	NA	129824136	129812941	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_129814223_129818519_129818648_129818744_129818921_129822580_129822847_129823907
transcript_199455.known	chr9	+	4293	26	FSM	ENSG00000136878.14	ENST00000372429.8	4293	26	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	19.204332844439	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACGGCCACACAGTCGTC	129833957	True	NA	9	True	AATAAA	-16	NA	129835457	129881828	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129835500_129849812_129849925_129852539_129852637_129856306_129856361_129858049_129858113_129858466_129858599_129860936_129861034_129861542_129861613_129863185_129863300_129865302_129865382_129868004_129868450_129868861_129869003_129869309_129869426_129869671_129869845_129870452_129870548_129873481_129873516_129873698_129873745_129874575_129874757_129874828_129874956_129875309_129875480_129875559_129875642_129876129_129876239_129878337_129878441_129879572_129879645_129880112_129880290_129880466
transcript_199457.known	chr9	+	4470	25	FSM	ENSG00000136878.14	ENST00000315480.9	4470	25	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	19.2987747883987	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACGGCCACACAGTCGTC	129833957	True	NA	9	True	AATAAA	-16	NA	129835457	129881828	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_129835500_129849812_129849925_129852539_129852637_129856306_129856361_129858049_129858113_129858466_129858599_129860936_129861034_129861542_129861613_129863185_129863300_129865302_129865382_129868004_129868450_129868861_129869003_129869309_129869426_129869671_129869845_129870452_129870548_129873481_129873516_129873698_129873745_129874575_129874757_129874828_129874956_129875309_129875480_129875559_129875642_129876129_129876239_129878337_129878441_129879572_129879645_129880112
transcript_199467.known	chr9	-	1795	9	FSM	ENSG00000136819.15	ENST00000372447.7	1795	9	0	0	0	0	multi-exon	FALSE	canonical	3	483	junction_1	77.3384404743204	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTATTGTTTGTATTATGT	-129825601	True	NA	81	True	ATTAAA	-18	NA	129835275	129827289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_129828253_129829204_129829304_129829404_129829542_129830870_129831069_129831895_129831974_129833446_129833518_129833657_129833710_129834706_129834767_129835138
transcript_19948.nic	chr1	-	1946	10	ISM	ENSG00000154380.18	ENST00000366844.7	13168	15	-23	24976	-23	7233	5prime_fragment	FALSE	canonical	3	338	junction_4	38.1575680566778	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTTCAAGATAAATATT	-225640935	True	NA	NA	False	NA	NA	NA	225653165	225511810	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_225511860_225512656_225512715_225512870_225513017_225514595_225514901_225517195_225517307_225519197_225519566_225530553_225530639_225554905_225555084_225567248_225567415_225652685
transcript_199482.known	chr9	-	783	6	FSM	ENSG00000136819.15	ENST00000461349.5	783	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	209.424544884309	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGAAAAGTTAGCCAGGC	-129825580	True	NA	NA	False	NA	NA	NA	129835254	129827967	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_129828253_129829204_129829304_129829404_129829542_129830870_129830962_129834711_129834767_129835138
transcript_199484.nic	chr9	-	649	6	ISM	ENSG00000136819.15	ENST00000372447.7	1795	9	-53	3581	-47	64	5prime_fragment	FALSE	canonical	3	556	junction_1	56.3041739127749	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTTTGAGACCCCTAGG	-129825654	True	NA	NA	False	NA	NA	NA	129835328	129830870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_129831069_129831895_129831974_129833446_129833518_129833657_129833710_129834706_129834767_129835138
transcript_199486.known	chr9	-	5420	17	FSM	ENSG00000187239.17	ENST00000446176.7	5420	17	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_6	23.9092522624611	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCGTGTCACGGGACTGT	-130038918	True	NA	-15	True	AATAAA	-13	NA	130043189	129887186	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_129890547_129895837_129895997_129899964_129900102_129900425_129900548_129902868_129903002_129908889_129909000_129915965_129915981_129923843_129924027_129924959_129925158_129927194_129927342_129929566_129929696_129957359_129957465_129958490_129958554_129978464_129978613_129979317_129979375_129994842_129994959_130042951
transcript_199489.known	chr9	-	5410	16	FSM	ENSG00000187239.17	ENST00000420781.5	5410	16	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_7	17.3276913894751	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCGTGTCACGGGACTGT	-130038923	True	NA	-15	True	AATAAA	-13	NA	130043194	129887186	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_129890547_129895837_129895997_129899964_129900102_129900425_129900548_129902868_129903002_129908889_129909000_129923843_129924027_129924959_129925158_129927194_129927342_129929566_129929696_129957359_129957465_129958490_129958554_129978464_129978613_129979317_129979375_129994842_129994959_130042951
transcript_19949.nic	chr1	-	1895	9	ISM	ENSG00000154380.18	ENST00000366844.7	13168	15	-33	25834	-33	6375	5prime_fragment	FALSE	canonical	3	338	junction_3	36.9560549842648	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGACAAAGGTGTAAGTTA	-225653095	False	NA	NA	False	AATAGA	-14	NA	225653175	225512668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_225512715_225512870_225513017_225514595_225514901_225517195_225517307_225519197_225519566_225530553_225530639_225554905_225555084_225567248_225567415_225652685
transcript_199490.known	chr9	-	1977	16	FSM	ENSG00000187239.17	ENST00000355681.3	1977	16	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	27.3037237997555	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACTTAAAAA	-130038896	True	NA	NA	False	NA	NA	NA	130043167	129895811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_129895997_129899964_129900102_129900425_129900548_129902868_129903002_129908889_129909000_129915965_129915981_129923843_129923940_129924959_129925158_129927194_129927342_129929566_129929696_129957359_129957465_129958490_129958554_129978464_129978613_129979317_129979375_129994842_129994959_130042951
transcript_199493.nic	chr9	-	2139	16	ISM	ENSG00000187239.17	ENST00000446176.7	5420	17	-53	8625	-48	0	5prime_fragment	FALSE	canonical	2	14	junction_5	23.974060055726	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACTTAAAAA	-130043232	False	NA	NA	False	NA	NA	NA	130043242	129895811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_129895997_129899964_129900102_129900425_129900548_129902868_129903002_129908889_129909000_129915965_129915981_129923843_129924027_129924959_129925158_129927194_129927342_129929566_129929696_129957359_129957465_129958490_129958554_129978464_129978613_129979317_129979375_129994842_129994959_130042951
transcript_199496.nic	chr9	-	2094	15	NIC	ENSG00000187239.17	novel	1977	16	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_6	16.7638155025663	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACTTAAAAA	-130043232	False	NA	NA	False	NA	NA	NA	130043242	129895811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_129895997_129899964_129900102_129900425_129900548_129902868_129903002_129908889_129909000_129923843_129923997_129924959_129925158_129927194_129927342_129929566_129929696_129957359_129957465_129958490_129958554_129978464_129978613_129979317_129979375_129994842_129994959_130042951
transcript_199497.nic	chr9	-	2124	15	ISM	ENSG00000187239.17	ENST00000420781.5	5410	16	-48	8625	-48	0	5prime_fragment	FALSE	canonical	3	31	junction_6	16.2468207250979	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACTTAAAAA	-130043232	False	NA	NA	False	NA	NA	NA	130043242	129895811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_129895997_129899964_129900102_129900425_129900548_129902868_129903002_129908889_129909000_129923843_129924027_129924959_129925158_129927194_129927342_129929566_129929696_129957359_129957465_129958490_129958554_129978464_129978613_129979317_129979375_129994842_129994959_130042951
transcript_199505.nic	chr9	-	437	3	ISM	ENSG00000187239.17	ENST00000355681.3	1977	16	-75	83533	-48	-998	5prime_fragment	FALSE	canonical	3	80	junction_2	3	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTCGAAGGAGGAAGAAG	-130043232	False	NA	NA	False	NA	NA	NA	130043242	129979344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_129979375_129994842_129994959_130042951
transcript_199507.known	chr9	+	6991	19	FSM	ENSG00000148358.20	ENST00000372410.7	6991	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	20.631690833925	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTGAGATGCAGGGAG	NA	False	NA	21	True	AATAAA	-21	NA	130053705	130140169	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_130054074_130075635_130075750_130076411_130076463_130077298_130077379_130079629_130079770_130083564_130083603_130086419_130086477_130090875_130090984_130092247_130092382_130099456_130099533_130100628_130100703_130101105_130101224_130104419_130104551_130107495_130107540_130110369_130110427_130124914_130124965_130127482_130127567_130128639_130128762_130135024
transcript_199509.known	chr9	+	6729	18	FSM	ENSG00000148358.20	ENST00000347136.11	6729	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	19.116470552034	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGTGTGTTTGAGATGCA	130050358	True	NA	16	True	AATAAA	-16	NA	130053905	130140164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_130054074_130075635_130075750_130076411_130076463_130077298_130077379_130079629_130079770_130083564_130083603_130086419_130086477_130090875_130090984_130092247_130092382_130099456_130099533_130100628_130100703_130101105_130101224_130104419_130104551_130107495_130107540_130124914_130124965_130127482_130127567_130128639_130128762_130135024
transcript_199513.known	chr9	+	2833	17	FSM	ENSG00000148358.20	ENST00000493417.5	2833	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	25.6804278585852	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGGTGCTTCTTTGAC	130050373	True	NA	20	True	TTTAAA	-5	NA	130053920	130130024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_130054074_130075635_130075750_130076411_130076463_130077298_130077375_130079629_130079770_130083564_130083603_130086419_130086477_130090875_130090984_130092247_130092382_130099456_130099533_130100628_130100703_130101105_130101224_130104419_130104551_130107495_130107540_130124914_130124965_130127482_130127567_130128639
transcript_199521.nic	chr9	+	3102	3	ISM	ENSG00000148357.18	ENST00000683500.2	15789	98	-232	146545	-232	-51028	intron_retention	FALSE	canonical	2	5	junction_2	1	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTAGGTCTCCTTGTGTGC	130265503	True	NA	NA	False	NA	NA	NA	130265527	130287578	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_130266138_130284602_130284674_130285157
transcript_199526.known	chr9	+	1548	16	FSM	ENSG00000130707.18	ENST00000372393.7	1548	16	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	143.462639348678	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGTCTTTTATTTCTAG	130437869	False	NA	11	True	ATTAAA	-6	NA	130444987	130501255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_130444996_130450271_130450334_130452223_130452334_130454304_130454374_130458400_130458590_130464110_130464168_130466724_130466800_130470833_130470905_130471484_130471516_130476870_130476962_130479715_130479801_130480384_130480450_130489332_130489465_130494866_130495024_130499504_130499571_130500975
transcript_199527.known	chr9	+	1532	15	FSM	ENSG00000130707.18	ENST00000352480.10	1532	15	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_1	43.0960010456011	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGTGTGTGTGTGTGT	130437842	True	NA	30	True	ATTAAA	-25	NA	130444960	130501274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_130444996_130452223_130452334_130454304_130454374_130458400_130458590_130464110_130464168_130466724_130466800_130470833_130470905_130471484_130471516_130476870_130476962_130479715_130479801_130480384_130480450_130489332_130489465_130494866_130495024_130499504_130499571_130500975
transcript_19953.nic	chr1	-	956	5	ISM	ENSG00000154380.18	ENST00000366844.7	13168	15	-11	32672	-11	-89	5prime_fragment	FALSE	canonical	3	355	junction_1	40.5154291597658	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGGAAAGAGAAAGGTTG	-225640923	True	NA	-1	True	NA	NA	NA	225653153	225519506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_225519566_225530553_225530639_225554905_225555084_225567248_225567415_225652685
transcript_199534.nic	chr9	+	4026	20	NIC	ENSG00000107164.16	novel	5090	21	NA	NA	-18	0	combination_of_known_junctions	TRUE	canonical	3	27	junction_2	178.473350509552	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGGCCTGTTTGCTTTC	130570819	True	NA	34	True	AATAAA	-31	NA	130579558	130638352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_130579765_130580658_130581514_130595482_130595589_130609953_130609988_130612455_130612506_130612955_130613028_130614287_130614346_130616354_130616518_130617796_130617896_130620353_130620459_130622707_130622811_130623610_130623712_130626363_130626506_130630627_130630789_130631556_130631631_130631941_130632023_130632201_130632279_130634666_130634739_130635998_130636127_130637013
transcript_199541.known	chr9	+	3153	19	FSM	ENSG00000107164.16	ENST00000319725.10	3153	19	0	0	0	0	multi-exon	FALSE	canonical	3	493	junction_17	52.8382110144721	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGGCCTGTTTGCTTTC	130570837	True	NA	34	True	AATAAA	-31	NA	130579576	130638352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_130579765_130595482_130595589_130609953_130609988_130612455_130612506_130612955_130613028_130614287_130614346_130616354_130616518_130617796_130617896_130620353_130620459_130622707_130622811_130623610_130623712_130626363_130626506_130630627_130630789_130631556_130631631_130631941_130632023_130632201_130632279_130634666_130634739_130635998_130636127_130637013
transcript_199544.nnic	chr9	+	3093	18	NIC	ENSG00000107164.16	novel	3153	19	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	89	junction_16	129.872815080315	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGGCCTGTTTGCTTTC	130570825	True	NA	34	True	AATAAA	-31	NA	130579564	130638352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_130579765_130595482_130595589_130609953_130609988_130612455_130612506_130612955_130613028_130614287_130614346_130616354_130616518_130617796_130617896_130620353_130620459_130622707_130622811_130623610_130623712_130626363_130626506_130630627_130630789_130631556_130631631_130631941_130632023_130632201_130632279_130635998_130636127_130637013
transcript_199560.known	chr9	+	2012	9	FSM	ENSG00000130713.17	ENST00000372358.10	2012	9	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_7	7.18396652275051	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTATCTAAAAATGGTGC	130687522	True	NA	5	True	NA	NA	NA	130693779	130704892	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_130693914_130695491_130695594_130697581_130697628_130698161_130698252_130699328_130699395_130700866_130700936_130702133_130702311_130703052_130703182_130703693
transcript_19957.known	chr1	+	856	5	FSM	ENSG00000143742.14	ENST00000651465.1	856	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	3115.81709788941	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTTCTCTGGCAAATTT	225760905	True	NA	NA	False	AAAACA	-5	NA	225777845	225789627	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_225778013_225783299_225783369_225786861_225786986_225789033_225789142_225789239
transcript_199572.known	chr9	+	1956	8	FSM	ENSG00000130713.17	ENST00000546165.6	1928	8	-20	-8	4	2	multi-exon	FALSE	canonical	3	10	junction_5	71.8836929082142	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATCTAAAAATGGTGCCC	130687502	True	NA	7	True	NA	NA	NA	130693759	130704894	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_130693914_130695491_130695594_130697581_130697628_130698161_130698252_130699328_130699395_130702142_130702311_130703052_130703182_130703693
transcript_199575.known	chr9	+	1885	8	FSM	ENSG00000130713.17	ENST00000372351.7	1885	8	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	70.345503025555	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGAATTCCTGTGCATT	130687528	True	NA	11	True	GATAAA	-27	NA	130693785	130704861	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_130693914_130695491_130695594_130697581_130697628_130699328_130699395_130700866_130700936_130702133_130702311_130703052_130703182_130703693
transcript_199582.known	chr9	+	4754	11	FSM	ENSG00000097007.19	ENST00000372348.7	4754	11	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	72.6022726917002	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGTCAGGGGTCAGGTG	130712971	False	NA	NA	False	NA	NA	NA	130713015	130885683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_130714456_130854063_130854238_130854800_130855097_130862762_130863036_130872128_130872214_130872859_130873038_130874867_130875053_130878414_130878568_130880067_130880158_130880499_130880665_130883968
transcript_199583.known	chr9	+	5578	11	FSM	ENSG00000097007.19	ENST00000318560.6	5578	11	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	31.816505150629	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGCAGATTGCTTCGG	130832688	True	NA	27	True	AATAAA	-19	NA	130835253	130887675	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_130835526_130854063_130854238_130854800_130855097_130862762_130863036_130872128_130872214_130872859_130873038_130874867_130875053_130878414_130878568_130880067_130880158_130880499_130880665_130883968
transcript_199585.known	chr9	-	3119	8	FSM	ENSG00000130720.13	ENST00000448616.5	3119	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	5.20988072251728	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGCAGCGCTTCCTTCT	-130939053	False	NA	2	True	NA	NA	NA	130939068	130902437	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_130904324_130905233_130905414_130911791_130911889_130923743_130923881_130924236_130924397_130929566_130930047_130938535_130938649_130939002
transcript_199588.known	chr9	-	3650	7	FSM	ENSG00000130720.13	ENST00000372338.9	3650	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	2.85287379477061	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTGCAGCGCTTCCTT	-130938674	True	NA	0	True	NA	NA	NA	130939247	130902439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_130904324_130905233_130905414_130911791_130911889_130923743_130923881_130924236_130924397_130929566_130930047_130938535
transcript_199589.known	chr9	-	449	3	FSM	ENSG00000130720.13	ENST00000486250.5	449	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	19	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACGCTGGGTATTGTGAT	-130939124	False	NA	-4	True	AATAAA	-16	NA	130939139	130938016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_130938216_130938535_130938649_130939002
transcript_19959.known	chr1	+	1596	4	FSM	ENSG00000143742.14	ENST00000366839.8	1596	4	0	0	0	0	multi-exon	FALSE	canonical	3	755	junction_3	3141.73402226647	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTTGTGTTGAAGTTT	225760896	True	NA	14	True	AATAAA	-18	NA	225777836	225790466	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_225778013_225783299_225783369_225786861_225786986_225789239
transcript_199591.known	chr9	-	385	3	FSM	ENSG00000130720.13	ENST00000463475.1	385	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	27	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACGCTGGGTATTGTGAT	-130938713	True	NA	-4	True	AATAAA	-16	NA	130939286	130938016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_130938216_130938535_130938649_130939213
transcript_199593.known	chr9	+	7455	28	FSM	ENSG00000050555.19	ENST00000361069.9	7455	28	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_3	25.142283721393	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTCCCTAGATGTCTGG	131005836	True	NA	NA	False	ATTAAA	-16	NA	131009173	131094473	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131009588_131026284_131026590_131032044_131032176_131036165_131036333_131038863_131039053_131039130_131039249_131041636_131041736_131045523_131045661_131049019_131049131_131052490_131052684_131052849_131052966_131056928_131057148_131061034_131061224_131066959_131067206_131068077_131068232_131068907_131069051_131069671_131069851_131071483_131071626_131072629_131072836_131073244_131073322_131075830_131075966_131077186_131077335_131079148_131079299_131082058_131082162_131085523_131085724_131087475_131087623_131087717_131087818_131091536
transcript_199603.nic	chr9	+	3404	9	ISM	ENSG00000050555.19	ENST00000361069.9	7455	28	-73	43683	-73	-31371	5prime_fragment	FALSE	canonical	3	107	junction_3	15.4191439451093	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTATTTAATGGTGCAAGC	131005763	True	NA	NA	False	AAAAAG	-15	NA	131009100	131050790	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_131009588_131026284_131026590_131032044_131032176_131036165_131036333_131038863_131039053_131039130_131039249_131041636_131041736_131045523_131045661_131049019
transcript_199607.known	chr9	+	3515	7	FSM	ENSG00000126878.13	ENST00000372309.7	3515	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	571.699415971559	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTGGTGTATTTTGGGG	131079075	True	NA	34	True	AATAAA	-22	NA	131096475	131123152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131096661_131096801_131096864_131106187_131106266_131111596_131111664_131114576_131114619_131117755_131117919_131120234
transcript_19961.known	chr1	+	540	4	FSM	ENSG00000143742.14	ENST00000366838.1	540	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	3495.9573796029	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATGTTTTCAGTTAGAAA	225760994	False	NA	NA	False	NA	NA	NA	225777934	225789524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_225778013_225783299_225783369_225789033_225789142_225789239
transcript_19962.known	chr1	+	548	3	FSM	ENSG00000143742.14	ENST00000650651.1	548	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	3713.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTAGTCCCAGCTACT	225760889	True	NA	NA	False	AATAGA	-26	NA	225777829	225788266	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_225778013_225783299_225783369_225787970
transcript_199620.known	chr9	+	3340	6	FSM	ENSG00000126878.13	ENST00000372302.5	3340	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	470.161419089232	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACGTCTTGATTGGTGTAT	131079141	True	NA	27	True	AATAAA	-15	NA	131096541	131123145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131096661_131096801_131096864_131111596_131111664_131114576_131114595_131117755_131117919_131120234
transcript_199623.known	chr9	+	3284	6	FSM	ENSG00000126878.13	ENST00000372300.5	3284	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	473.676514089521	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACGTCTTGATTGGTGTAT	131079150	True	NA	27	True	AATAAA	-15	NA	131096550	131123145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131096661_131096801_131096864_131111596_131111664_131114576_131114619_131117755_131117848_131120234
transcript_199625.known	chr9	+	3374	6	FSM	ENSG00000126878.13	ENST00000247291.8	3374	6	0	0	0	0	multi-exon	FALSE	canonical	3	1125	junction_2	56.9792944849267	2821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACGTCTTGATTGGTGTA	131079130	True	NA	26	True	AATAAA	-14	NA	131096530	131123144	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131096661_131096801_131096864_131111596_131111664_131114576_131114619_131117755_131117919_131120234
transcript_199628.known	chr9	+	3398	6	FSM	ENSG00000126878.13	ENST00000372314.3	3398	6	0	0	0	0	multi-exon	TRUE	canonical	3	146	junction_1	427.368412496759	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACGTCTTGATTGGTGTAT	131079129	True	NA	27	True	AATAAA	-15	NA	131096529	131123145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131096661_131096779_131096864_131111596_131111664_131114576_131114619_131117755_131117919_131120234
transcript_19963.known	chr1	+	1420	3	FSM	ENSG00000143742.14	ENST00000651761.1	1420	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	3673	934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGTGTTGAAGTTTTT	225760931	True	NA	16	True	AATAAA	-20	NA	225777871	225790468	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_225778013_225783299_225783369_225789258
transcript_199641.known	chr9	+	7538	36	FSM	ENSG00000126883.18	ENST00000411637.6	7538	36	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_12	42.9101006138867	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATCATGTTGCAGACAGT	131117718	True	NA	10	True	AATAAA	-19	NA	131125585	131234663	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131125750_131127523_131127720_131128331_131128484_131129278_131129478_131130765_131130837_131132595_131132660_131133105_131133210_131134897_131135005_131135939_131136007_131139280_131139408_131140548_131140711_131144279_131144755_131146161_131146305_131147486_131147585_131150323_131150411_131150615_131150766_131151735_131151895_131159382_131159487_131162990_131163174_131163869_131163956_131164060_131164145_131174054_131174319_131175459_131175622_131178310_131178411_131187288_131187365_131189052_131189132_131192207_131192293_131195232_131195295_131197215_131199016_131201646_131201718_131215211_131215369_131222777_131222931_131228159_131228332_131230629_131230770_131232283_131232309_131233453
transcript_199642.known	chr9	+	6537	36	FSM	ENSG00000126883.18	ENST00000652454.1	6537	36	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_12	39.6896120681779	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATTAAACAGTCTGTTTC	131117728	True	NA	0	True	NA	NA	NA	131125595	131233678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131125750_131127523_131127720_131128331_131128484_131129278_131129478_131130765_131130837_131132595_131132660_131133105_131133210_131134897_131135005_131135939_131136007_131139280_131139408_131140548_131140711_131144279_131144755_131146164_131146305_131147489_131147585_131150323_131150411_131150615_131150766_131151735_131151895_131159382_131159487_131162990_131163174_131163869_131163956_131164060_131164145_131174054_131174319_131175459_131175622_131178310_131178411_131187288_131187365_131189052_131189132_131192207_131192293_131195232_131195295_131197215_131199016_131201646_131201718_131215211_131215369_131222777_131222931_131228159_131228332_131230629_131230770_131232283_131232309_131233453
transcript_199651.known	chr9	+	2065	2	FSM	ENSG00000160539.6	ENST00000372264.4	2065	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTCCCGTGTGGCTTTTT	131289483	True	NA	8	True	AATACA	-18	NA	131289722	131309261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131290449_131307922
transcript_199652.known	chr9	+	972	2	FSM	ENSG00000160539.6	ENST00000372261.1	972	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCAGTCTGGAGGCTCTA	131289572	False	NA	7	True	AATAAA	-22	NA	131289811	131291445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131290449_131291110
transcript_199656.nic	chr9	+	2761	16	ISM	ENSG00000288701.1	ENST00000684596.1	11253	32	12	25535	12	3845	5prime_fragment	FALSE	canonical	3	140	junction_15	23.3822344716857	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCAGGATGCAGGTGCTC	131382784	True	NA	NA	False	AAGAAA	-2	NA	131394064	131474636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_131394264_131430089_131430260_131432616_131432795_131436619_131436723_131438988_131439062_131444184_131444329_131446400_131446643_131447084_131447207_131447661_131447805_131455075_131455167_131459163_131459357_131464762_131465079_131467562_131467754_131470787_131470984_131473507_131473725_131474453
transcript_199657.nic	chr9	+	2526	15	ISM	ENSG00000288701.1	ENST00000684596.1	11253	32	-58	26569	-58	2811	5prime_fragment	FALSE	canonical	3	147	junction_1	19.5181757260629	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACCCCCATCGACTCACC	131393724	False	NA	NA	False	AAGAAA	-6	NA	131393994	131473602	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_131394264_131430089_131430260_131432616_131432795_131436619_131436723_131438988_131439062_131444184_131444329_131446400_131446643_131447084_131447207_131447661_131447805_131455075_131455167_131459163_131459357_131464762_131465079_131467562_131467754_131470787_131470984_131473507
transcript_199668.nic	chr9	+	2904	21	NIC	ENSG00000130714.19	novel	3057	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_20	34.5949418268047	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTAGTTGGTGTTTGTT	131501400	True	NA	14	True	ATTAAA	-17	NA	131502894	131523799	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_131503074_131504188_131504341_131506113_131506221_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131509997_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931_131523171_131523346
transcript_199672.known	chr9	+	3164	20	FSM	ENSG00000130714.19	ENST00000679111.1	3164	20	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_14	35.0073201684157	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGCGTTTGTAGTTGGTG	131501449	True	NA	8	True	ATTAAA	-11	NA	131502943	131523793	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131503074_131504188_131504341_131506113_131506221_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131509997_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518697_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
transcript_199673.known	chr9	+	3057	20	FSM	ENSG00000130714.19	ENST00000402686.8	3057	20	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	26.076915848432	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTAGTTGGTGTTTGTT	131501423	True	NA	14	True	ATTAAA	-17	NA	131502917	131523799	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131503074_131504188_131504341_131506113_131506221_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131509997_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
transcript_199676.known	chr9	+	3252	20	FSM	ENSG00000130714.19	ENST00000372228.9	3252	20	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_8	36.9109882369949	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTAGTTGGTGTTTGTT	131502770	False	NA	14	True	ATTAAA	-17	NA	131502788	131523799	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131503074_131504188_131504341_131506113_131506221_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131510063_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
transcript_199683.known	chr9	+	2703	20	FSM	ENSG00000130714.19	ENST00000679023.1	2703	20	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_19	36.1850430526236	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTAGTTGGTGTTTGTT	131501449	True	NA	14	True	ATTAAA	-17	NA	131502943	131523799	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131503074_131506113_131506221_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131509997_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931_131523171_131523346
transcript_199687.known	chr9	+	3309	20	FSM	ENSG00000130714.19	ENST00000676640.1	3309	20	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	36.3833087054293	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTAGTTGGTGTTTGTT	131501411	True	NA	14	True	ATTAAA	-17	NA	131502905	131523799	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131503314_131504188_131504341_131506113_131506221_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131509997_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
transcript_199692.known	chr9	+	2583	19	FSM	ENSG00000130714.19	ENST00000683712.1	2583	19	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_9	36.4312730263573	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAGAGTGTGGCAAAGAA	131501472	True	NA	NA	False	AAAACA	-5	NA	131502966	131523106	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131503074_131504188_131504341_131506113_131506221_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131510416_131511336_131511473_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
transcript_199700.known	chr9	+	2573	19	FSM	ENSG00000130714.19	ENST00000678303.1	2573	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	43.089055068157	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCTGGTCCTTGCTAACT	131501453	True	NA	105	True	AAAAAG	-40	NA	131502947	131523435	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131503074_131504188_131504341_131506402_131506454_131507350_131507515_131508910_131509023_131509742_131509809_131509902_131509997_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
transcript_199706.known	chr9	+	2935	19	FSM	ENSG00000130714.19	ENST00000341012.13	2935	19	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	27.5444085876688	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTGTTTGTTATTTATT	131501400	True	NA	21	True	ATTAAA	-24	NA	131502894	131523806	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131503074_131506113_131506221_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131509997_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
transcript_199722.known	chr9	+	3423	18	FSM	ENSG00000130714.19	ENST00000677295.2	3423	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	43.4785075967123	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCAACTGGCGTTTGTAG	131501515	True	NA	2	True	ATTAAA	-5	NA	131503009	131523787	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131503074_131504188_131504650_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131510416_131511336_131511473_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
transcript_199733.known	chr9	+	2461	18	FSM	ENSG00000130714.19	ENST00000677216.1	2461	18	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	32.4499081630809	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTTGCTAACTGCTGCAG	131501403	True	NA	NA	False	NA	NA	NA	131502897	131523442	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131503074_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131509997_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
transcript_199746.known	chr9	+	2213	17	FSM	ENSG00000130714.19	ENST00000677029.1	2213	17	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	42.6071718581508	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCAGCGTAGGAGTCAT	131501425	True	NA	33	True	NA	NA	NA	131502919	131523363	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131503074_131506402_131506454_131508910_131509023_131509742_131509809_131509902_131509997_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
transcript_199767.known	chr9	-	788	7	FSM	ENSG00000130717.13	ENST00000494584.5	788	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	130.172214990587	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAATGGGCGGAGCTACAA	-131527097	True	NA	NA	False	NA	NA	NA	131531264	131525147	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_131525222_131525928_131525978_131528943_131529039_131529127_131529271_131529487_131529557_131530485_131530646_131531066
transcript_199768.known	chr9	-	2162	7	FSM	ENSG00000130717.13	ENST00000372215.5	2162	7	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_3	43.3503171845374	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCAGTTGGTTCCTTTTTT	-131527096	True	NA	-4	True	AATAAA	-21	NA	131531263	131523800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_131525222_131525928_131525978_131528943_131529039_131529127_131529271_131529487_131529585_131530485_131530646_131531066
transcript_199769.known	chr9	-	2051	7	FSM	ENSG00000130717.13	ENST00000372210.7	2051	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	137.064968374693	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCAGTTGGTTCCTTTTTT	-131527012	True	NA	-4	True	AATAAA	-21	NA	131531179	131523800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_131525222_131525928_131525978_131528943_131529039_131529127_131529271_131529487_131529585_131530485_131530646_131531093
transcript_199770.nic	chr9	-	2200	7	NIC	ENSG00000130717.13	novel	2237	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	139.545691441907	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCAGTTGGTTCCTTTTTT	-131527092	True	NA	-4	True	AATAAA	-21	NA	131531259	131523800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_131525222_131525928_131525978_131528943_131529039_131529127_131529271_131529487_131529585_131530485_131530688_131531066
transcript_199778.known	chr9	-	2063	6	FSM	ENSG00000130717.13	ENST00000372208.7	2063	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	159.73978840602	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCAGTTGGTTCCTTTTTT	-131527092	True	NA	-4	True	AATAAA	-21	NA	131531259	131523800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_131525222_131525928_131525978_131529127_131529271_131529487_131529585_131530485_131530646_131531066
transcript_199782.known	chr9	+	607	3	FSM	ENSG00000130714.19	ENST00000483472.2	607	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	40	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTGGCACTTTGGGAGG	131501489	True	NA	NA	False	NA	NA	NA	131502983	131506812	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_131503074_131506113_131506221_131506402
transcript_199784.known	chr9	-	2114	7	FSM	ENSG00000130717.13	ENST00000372211.7	2114	7	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_6	140.255322735202	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCAGTTGGTTCCTTTTTT	-131527033	True	NA	-4	True	AATAAA	-21	NA	131531200	131523800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_131525222_131525928_131525978_131528943_131529039_131529127_131529271_131529487_131529585_131530485_131530688_131531093
transcript_199789.known	chr9	-	1385	8	FSM	ENSG00000160563.14	ENST00000292035.10	1385	8	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_2	23.460779255287	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAAGGCTTTGTCTCCTGT	-132079305	True	NA	-7	True	AATAAA	-15	NA	132079867	131860111	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_131860673_131863062_131863141_131884057_131884100_131893884_131893993_131939380_131939475_132014336_132014468_132077441_132077587_132079641
transcript_199790.known	chr9	-	1281	7	FSM	ENSG00000160563.14	ENST00000357028.6	1281	7	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_3	140.488137102983	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTTGTCTCCTGTTTGTT	-132079304	True	NA	-2	True	AATAAA	-20	NA	132079866	131860106	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_131860673_131863062_131863141_131884057_131884100_131939380_131939475_132014336_132014468_132077441_132077587_132079641
transcript_199798.known	chr9	-	2042	4	FSM	ENSG00000160563.14	ENST00000651555.1	2042	4	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_3	19.3448241713959	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTCTGCCTCCAGAGGTTG	-132079294	True	NA	NA	False	TATAAA	-28	NA	132079856	131937923	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_131939475_132014336_132014468_132077441_132077587_132079641
transcript_199799.known	chr9	-	762	3	FSM	ENSG00000160563.14	ENST00000474263.1	762	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	182	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTGAATTTTTAATTT	-132079304	True	NA	NA	False	AATAAA	-15	NA	132079866	132073350	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_132073743_132077441_132077587_132079641
transcript_19980.nnic	chr1	-	4286	25	NNC	ENSG00000196187.12	novel	4109	25	NA	NA	79	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	54.5998066744644	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTTGCTTACCACACG	-225876966	True	NA	-12	True	AGTAAA	-17	NA	225882301	225845535	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_225846933_225847033_225847214_225848491_225848555_225848896_225849013_225849911_225850080_225852663_225852770_225853628_225853792_225855877_225855941_225856651_225856739_225856910_225857018_225859195_225859350_225860859_225860998_225862217_225862352_225862454_225862579_225862770_225862852_225865896_225865968_225866573_225866683_225867111_225867164_225867887_225868031_225871075_225871114_225871986_225872054_225874287_225874368_225877394_225877595_225879219_225879411_225882047
transcript_199806.nic	chr9	-	3951	10	ISM	ENSG00000107290.14	ENST00000224140.6	11101	26	-14	66489	-14	-45075	5prime_fragment	FALSE	canonical	3	43	junction_1	9.53097613955882	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAGAATAGAAGTTCAAA	-132350404	True	NA	NA	False	AAGAAA	-22	NA	132355000	132327844	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_132330500_132331051_132331140_132331276_132331449_132334607_132334728_132336295_132336516_132342689_132342800_132346260_132346472_132349251_132349436_132353648_132353756_132354916
transcript_19981.known	chr1	-	4109	25	FSM	ENSG00000196187.12	ENST00000366835.8	4109	25	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_17	41.2838875955257	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTTGCTTACCACACG	-225877045	True	NA	-12	True	AGTAAA	-17	NA	225882380	225845535	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_225846933_225847033_225847214_225848491_225848555_225848896_225849013_225849911_225850080_225852663_225852770_225853628_225853792_225855877_225855941_225856651_225856739_225856910_225857018_225859195_225859350_225860859_225860998_225862217_225862352_225862454_225862579_225862770_225862852_225865896_225865968_225866573_225866683_225867111_225867164_225867887_225868031_225871075_225871114_225871986_225872054_225874287_225874368_225877394_225877595_225879219_225879411_225882303
transcript_199811.nic	chr9	-	2793	10	ISM	ENSG00000107290.14	ENST00000224140.6	11101	26	-14	67647	-14	-46233	5prime_fragment	FALSE	canonical	3	43	junction_1	9.53097613955882	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAACAATTAAAGAATGA	-132350404	True	NA	NA	False	AAAACA	-15	NA	132355000	132329002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_132330500_132331051_132331140_132331276_132331449_132334607_132334728_132336295_132336516_132342689_132342800_132346260_132346472_132349251_132349436_132353648_132353756_132354916
transcript_199815.known	chr9	-	3143	11	FSM	ENSG00000125482.13	ENST00000334270.3	3143	11	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_10	20.9047841414352	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGGAACATATGAATTGA	-132403715	True	NA	4	True	ATTAAA	-42	NA	132406840	132375547	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_132376169_132379058_132379145_132386555_132386622_132388138_132388229_132390596_132390832_132392075_132392207_132396432_132396512_132398140_132398327_132400034_132400259_132401454_132402829_132406789
transcript_199817.known	chr9	-	1780	10	FSM	ENSG00000125482.13	ENST00000612514.4	1780	10	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_9	40.7370368686716	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGGAACATATGAATTGA	-132403726	True	NA	4	True	ATTAAA	-42	NA	132406851	132375547	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_132376169_132379058_132379145_132386555_132386622_132388138_132388229_132390596_132390832_132392075_132392207_132396432_132396512_132398140_132398327_132400034_132400259_132406789
transcript_199825.known	chr9	+	1725	6	FSM	ENSG00000188523.9	ENST00000393216.3	1725	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	3.9496835316263	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTGTCTCCATTTGAA	132409950	True	NA	18	True	ATTAAA	-20	NA	132410210	132573319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_132410467_132498694_132498795_132499371_132499601_132537600_132537707_132542945_132543048_132572387
transcript_199832.known	chr9	-	2814	20	FSM	ENSG00000125485.18	ENST00000372159.8	4159	20	-44	1389	-44	-1389	multi-exon	FALSE	canonical	3	57	junction_5	16.9948664238511	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTATCACTAATTATT	-132668990	True	NA	-30	True	AAAAAG	-5	NA	132670027	132594385	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_132595113_132612086_132612256_132618329_132618442_132625663_132625746_132630263_132630404_132632040_132632092_132642003_132642064_132645894_132646072_132646822_132647059_132648188_132648296_132648431_132648552_132650233_132650299_132651074_132651117_132652447_132652493_132658670_132658736_132659709_132659781_132661207_132661252_132662260_132662337_132662438_132662696_132669859
transcript_199844.known	chr9	-	1333	7	FSM	ENSG00000125485.18	ENST00000480876.3	1333	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	32.9616780856531	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCATGCTTGAGTCTGTG	-132670122	True	NA	-5	True	AATAAA	-24	NA	132670401	132658080	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_132658359_132658670_132658736_132659709_132659781_132661207_132661252_132662260_132662337_132662438_132662696_132669859
transcript_199848.known	chr9	+	8612	5	FSM	ENSG00000125484.12	ENST00000372146.5	8612	5	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_4	10.988630487918	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGCGTGTCTGTTTTATG	132667107	True	NA	15	True	AATAAA	-18	NA	132670463	132694953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_132670956_132677976_132679804_132683562_132683694_132687238_132687328_132688880
transcript_199854.nic	chr9	+	2596	2	ISM	ENSG00000125484.12	ENST00000483873.6	1417	3	-341	0	-341	0	intron_retention	FALSE	canonical	3	269	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTGAAAGCAGTGGAGTCA	132669157	True	NA	45	True	GATAAA	-39	NA	132669693	132679310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_132670956_132677976
transcript_199857.known	chr9	-	3953	23	FSM	ENSG00000165699.15	ENST00000643583.1	3953	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	30.5340887945325	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTCCTCAGTAGCTTTA	-132941027	True	NA	-120	True	NA	NA	NA	132944615	132895977	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_132896755_132897183_132897346_132897422_132897611_132900714_132900838_132901588_132901700_132902604_132902788_132903650_132903803_132904410_132904455_132905580_132906140_132906730_132906836_132907300_132907371_132910570_132910693_132911001_132911114_132911452_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944542
transcript_199859.known	chr9	-	8582	23	FSM	ENSG00000165699.15	ENST00000646625.1	8582	23	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_22	27.0133499288808	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTCTGCTGTGTGGACA	-132941045	True	NA	-6	True	AATAAA	-16	NA	132944633	132891352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_132896755_132897183_132897346_132897422_132897611_132900714_132900838_132901588_132901700_132902604_132902788_132903650_132903818_132904410_132904455_132905580_132906140_132906730_132906836_132907300_132907371_132910570_132910693_132911001_132911114_132911452_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944571
transcript_199862.known	chr9	-	4739	22	FSM	ENSG00000165699.15	ENST00000642811.1	4739	22	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_19	29.6350439119702	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTAGTAATGGCAGAGC	-132941031	True	NA	NA	False	GGGGCT	-34	NA	132944619	132895077	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_132896755_132897183_132897346_132897422_132897611_132900714_132900838_132901588_132901700_132902604_132902788_132903650_132903818_132904410_132904455_132905580_132906140_132906730_132906836_132907300_132907371_132910570_132910693_132911001_132911114_132911452_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132928766_132928953_132935032_132935096_132944571
transcript_199864.known	chr9	-	4039	23	FSM	ENSG00000165699.15	ENST00000642617.1	4039	23	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_12	28.0381970866133	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATGAGGCCAAATTTAAT	-132941035	True	NA	-54	True	NA	NA	NA	132944623	132895911	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_132896755_132897183_132897346_132897422_132897611_132900714_132900838_132901588_132901700_132902604_132902788_132903650_132903818_132904410_132904455_132905580_132906140_132906730_132906836_132907300_132907371_132910570_132910690_132911001_132911114_132911452_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944542
transcript_199865.known	chr9	-	8715	23	FSM	ENSG00000165699.15	ENST00000644097.1	8715	23	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_12	28.094623173121	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTCTGCTGTGTGGACA	-132944756	False	NA	-6	True	AATAAA	-16	NA	132944769	132891352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_132896755_132897183_132897346_132897422_132897611_132900714_132900838_132901588_132901700_132902604_132902788_132903650_132903818_132904410_132904455_132905580_132906140_132906730_132906836_132907300_132907371_132910570_132910690_132911001_132911114_132911452_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944571
transcript_199868.known	chr9	-	3693	22	FSM	ENSG00000165699.15	ENST00000646391.1	3693	22	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_19	29.5869524470169	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCTTTCCTGTTTCCAG	-132941045	True	NA	NA	False	NA	NA	NA	132944633	132896166	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_132896755_132897183_132897346_132897422_132897611_132900714_132900838_132901588_132901700_132902604_132902788_132903650_132903818_132904410_132904455_132905580_132906140_132906730_132906836_132907300_132907371_132910570_132910693_132911001_132911114_132911452_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132928766_132928953_132935032_132935096_132944542
transcript_199883.known	chr9	-	1787	12	FSM	ENSG00000165699.15	ENST00000647462.1	1787	12	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	28.1439628451307	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACGATCATGGCTCACTG	-132941028	True	NA	NA	False	NA	NA	NA	132944616	132910260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_132910690_132911001_132911114_132911452_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944542
transcript_199884.known	chr9	-	2232	12	FSM	ENSG00000165699.15	ENST00000645150.1	2232	12	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_11	24.7600050734985	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGTGTTCTGTATTAAG	-132941045	True	NA	-6	True	AATAAA	-19	NA	132944633	132909806	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_132910693_132911001_132911114_132911452_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944571
transcript_199888.known	chr9	-	1717	10	FSM	ENSG00000165699.15	ENST00000403810.6	1717	10	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_9	22.4422441165685	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTCTTAGGTTGGATT	-132941045	True	NA	NA	False	AGTAAA	-20	NA	132944633	132910998	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944542
transcript_199891.known	chr9	-	2549	14	FSM	ENSG00000165699.15	ENST00000642646.1	2549	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	43.4978065147845	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGTGTTCTGTATTAAG	-132941039	True	NA	-6	True	AATAAA	-19	NA	132944627	132909806	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_132910693_132911001_132911114_132911452_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132931208_132931428_132934465_132934541_132935032_132935096_132944542
transcript_199895.known	chr9	+	2110	12	FSM	ENSG00000148308.18	ENST00000372108.9	2110	12	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_9	159.604832255602	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTTGGTTTCTTGGTGT	133022048	True	NA	25	True	ATTAAA	-14	NA	133031003	133058501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_133031165_133042086_133042307_133043727_133043927_133050782_133050979_133052059_133052165_133053827_133053943_133054407_133054489_133054711_133054810_133054943_133054965_133056011_133056095_133056765_133056909_133057813
transcript_1999.nic	chr1	+	2055	6	NIC	ENSG00000187017.18	novel	1339	8	NA	NA	3	0	intron_retention	FALSE	canonical	3	112	junction_1	14.661514246489	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGCTGTGGCCGCGACTTG	6446338	True	NA	22	True	ATTAAA	-30	NA	6448045	6460944	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_6448118_6448640_6449092_6451602_6452097_6457183_6457264_6457360_6457373_6459998
transcript_199907.known	chr9	+	2098	11	FSM	ENSG00000148308.18	ENST00000372097.10	2098	11	0	0	0	0	multi-exon	FALSE	canonical	3	430	junction_8	51.0141156935999	1778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGGTTTCTTGGTGTGA	133022041	True	NA	27	True	ATTAAA	-16	NA	133030996	133058503	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_133031165_133042086_133042307_133043727_133043927_133050782_133050979_133052059_133052165_133053827_133053943_133054407_133054489_133054711_133054810_133056011_133056095_133056765_133056909_133057813
transcript_199913.nic	chr9	+	2165	11	NIC	ENSG00000148308.18	novel	1999	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_1	145.055196390891	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTTGGTTTCTTGGTGT	NA	False	NA	25	True	ATTAAA	-14	NA	133030673	133058501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_133030911_133042086_133042307_133043727_133043927_133050782_133050979_133052059_133052165_133053827_133053943_133054407_133054489_133054711_133054810_133056011_133056095_133056765_133056909_133057813
transcript_199935.known	chr9	+	1999	9	FSM	ENSG00000148308.18	ENST00000372099.10	1999	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	173.762724354218	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTTGGTTTCTTGGTGT	NA	False	NA	25	True	ATTAAA	-14	NA	133030674	133058501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_133031165_133050782_133050979_133052059_133052165_133053827_133053943_133054407_133054489_133054711_133054810_133056011_133056095_133056765_133056909_133057813
transcript_199977.known	chr9	-	3598	18	FSM	ENSG00000160271.16	ENST00000372047.7	3598	18	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_17	32.8546131545683	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTCATTACAGTTTTG	-133121011	False	NA	NA	False	ATTAAA	-18	NA	133121176	133097719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133098763_133100267_133100383_133101519_133101763_133101937_133102140_133102475_133102572_133102778_133102901_133103229_133103263_133103746_133103834_133104262_133104332_133105931_133106017_133106644_133106749_133107084_133107301_133107987_133108407_133108672_133108867_133109625_133109686_133110295_133110490_133112041_133112153_133120971
transcript_199978.nic	chr9	-	3675	18	NIC	ENSG00000160271.16	novel	3801	18	NA	NA	88	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_15	17.267887270765	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCTGGTCATTACAGTTT	-133147762	True	NA	NA	False	ATTAAA	-16	NA	133149246	133097721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_133098763_133100267_133100383_133101519_133101763_133101937_133102140_133102475_133102572_133102778_133102901_133103229_133103263_133103746_133103834_133104262_133104332_133105931_133106017_133106644_133106749_133107084_133107301_133107987_133108407_133108672_133108867_133109625_133109686_133110295_133110490_133112041_133112153_133148962
transcript_199979.known	chr9	-	3801	18	FSM	ENSG00000160271.16	ENST00000393160.7	3801	18	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_15	21.5604084161842	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTCATTACAGTTTTG	-133149281	False	NA	NA	False	ATTAAA	-18	NA	133149334	133097719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133098763_133100267_133100383_133101519_133101763_133101937_133102140_133102475_133102572_133102778_133102901_133103229_133103263_133103746_133103834_133104262_133104332_133105931_133106017_133106644_133106749_133107084_133107301_133107987_133108407_133108672_133108867_133109625_133109722_133110295_133110490_133112041_133112153_133148962
transcript_199988.nic	chr9	-	3583	18	NIC	ENSG00000160271.16	novel	3801	18	NA	NA	88	-92	combination_of_known_junctions	FALSE	canonical	3	89	junction_15	17.267887270765	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTTTACTGATTGGGG	-133147762	True	NA	NA	False	TATAAA	-21	NA	133149246	133097813	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_133098763_133100267_133100383_133101519_133101763_133101937_133102140_133102475_133102572_133102778_133102901_133103229_133103263_133103746_133103834_133104262_133104332_133105931_133106017_133106644_133106749_133107084_133107301_133107987_133108407_133108672_133108867_133109625_133109686_133110295_133110490_133112041_133112153_133148962
transcript_199989.known	chr9	-	3696	18	FSM	ENSG00000160271.16	ENST00000372050.8	3696	18	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_17	35.0184331094275	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCTGGTCATTACAGTTT	-133121075	True	NA	NA	False	ATTAAA	-16	NA	133121240	133097721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133098763_133100267_133100383_133101519_133101763_133101937_133102140_133102475_133102572_133102778_133102901_133103229_133103263_133103746_133103834_133104262_133104332_133105931_133106017_133106644_133106749_133107084_133107301_133107987_133108407_133108672_133108867_133109625_133109722_133110295_133110490_133112041_133112153_133120971
transcript_199997.nic	chr9	-	3850	17	NIC	ENSG00000160271.16	novel	3801	18	NA	NA	88	0	intron_retention	FALSE	canonical	3	89	junction_14	17.2005632175228	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCTGGTCATTACAGTTT	-133147762	True	NA	NA	False	ATTAAA	-16	NA	133149246	133097721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_133098763_133100267_133100383_133101519_133102140_133102475_133102572_133102778_133102901_133103229_133103263_133103746_133103834_133104262_133104332_133105931_133106017_133106644_133106749_133107084_133107301_133107987_133108407_133108672_133108867_133109625_133109686_133110295_133110490_133112041_133112153_133148962
transcript_2.known	ERCC-00003	+	1007	1	FSM	ERCC-00003A	DQ516784	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	431	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AAAAAG	-30	NA	0	1007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00003_+_0_1000
transcript_20.known	ERCC-00054	+	256	1	FSM	ERCC-00054A	DQ516731	256	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00054_+_0_300
transcript_200.known	SIRV6	+	1528	10	FSM	SIRV6A	SIRV612	1528	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	9209.96583551524	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGACCGGGAGTATACT	NA	False	NA	NA	False	NA	NA	NA	1087	11825	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11031_11109_11205
transcript_200008.known	chr9	-	1935	7	FSM	ENSG00000148288.13	ENST00000372043.7	1935	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4.59770474137791	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAGCTAGGGTGATTTTT	-133162766	True	NA	-21	True	AATAAA	-17	NA	133163919	133152952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133154243_133155177_133155313_133155900_133155937_133156014_133156066_133161466_133161533_133162341_133162533_133163753
transcript_200009.known	chr9	-	847	7	FSM	ENSG00000148288.13	ENST00000372038.7	847	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	3.76017139089283	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGATGGAGACCATCAGCCA	-133162744	False	NA	NA	False	NA	NA	NA	133163897	133154074	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133154262_133155177_133155313_133155900_133155937_133156014_133156103_133161466_133161533_133162341_133162533_133163753
transcript_20001.nnic	chr1	-	4515	24	NIC	ENSG00000196187.12	novel	4109	25	NA	NA	-515	0	combination_of_known_splicesites	FALSE	canonical	2	31	junction_16	48.6763937072974	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTTGCTTACCACACG	-225881163	False	1732	-12	True	AGTAAA	-17	NA	225882895	225845535	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_225846933_225847033_225847214_225848491_225848555_225848896_225849013_225849911_225850080_225852663_225852770_225853628_225853792_225855877_225855941_225856651_225856739_225856910_225857018_225859195_225859350_225860859_225860998_225862217_225862352_225862454_225862579_225862770_225862852_225865896_225865968_225867111_225867164_225867887_225868031_225871075_225871114_225871986_225872054_225874287_225874368_225877394_225877595_225879219_225879411_225882303
transcript_200012.known	chr9	-	1449	6	FSM	ENSG00000148288.13	ENST00000540636.6	1449	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5.2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATCTCACAGTAACGCGGC	-133162761	True	NA	NA	False	NA	NA	NA	133163914	133153401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133154262_133155177_133155313_133155900_133155937_133161466_133161533_133162341_133162533_133163753
transcript_200023.known	chr9	-	4235	5	FSM	ENSG00000148296.7	ENST00000372022.6	4235	5	0	0	0	0	multi-exon	TRUE	canonical	3	557	junction_3	51.8700298823897	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACACTGGATTTAATTCAG	-133316829	True	NA	NA	False	AATAAA	-18	NA	133336188	133328775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133332349_133332547_133332761_133333717_133333807_133334391_133334602_133336038
transcript_200037.nic	chr9	-	319	2	ISM	ENSG00000148296.7	ENST00000372022.6	4235	5	-101	5758	-101	-2728	5prime_fragment	FALSE	canonical	3	588	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCCGGAAGCGAGAAGAGAA	-133316930	False	NA	NA	False	AAAAAG	-25	NA	133336289	133334533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_133334602_133336038
transcript_200039.known	chr9	-	4367	5	FSM	ENSG00000148297.16	ENST00000610672.4	4367	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	149.668801024128	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAAAGA	-133347688	False	NA	NA	False	NA	NA	NA	133347703	133338322	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133341695_133344124_133344334_133345171_133345253_133346539_133346701_133347159
transcript_200040.known	chr9	-	4044	5	FSM	ENSG00000148297.16	ENST00000343730.10	4044	5	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	85.0951673128386	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAGAAAAAGAAATTA	-133338507	True	NA	NA	False	NA	NA	NA	133348131	133338311	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133341695_133344124_133344334_133345171_133345253_133346539_133346701_133347921
transcript_200046.known	chr9	-	3867	4	FSM	ENSG00000148297.16	ENST00000610888.4	3867	4	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_2	12.1928941054479	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGCTCTTTCTTCCTCA	-133338493	True	NA	-9	True	ATTAAA	-20	NA	133348117	133340904	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133344334_133345171_133345253_133346539_133346701_133347921
transcript_200047.known	chr9	-	561	4	FSM	ENSG00000148297.16	ENST00000457204.2	561	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	158.80386225362	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGACCGGAAGCTCATCAC	-133338507	True	NA	NA	False	NA	NA	NA	133348131	133344204	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133344334_133345171_133345253_133346539_133346701_133347941
transcript_200052.known	chr9	+	887	8	FSM	ENSG00000148303.17	ENST00000323345.11	887	8	0	0	0	0	multi-exon	FALSE	canonical	3	2872	junction_1	1042.24878537336	4888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGTCTGTTGAGTATC	133241136	True	NA	20	True	CATAAA	-31	NA	133348217	133351426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_133348247_133348921_133349043_133349550_133349701_133349911_133350053_133350239_133350320_133350596_133350728_133351001_133351072_133351261
transcript_200057.known	chr9	+	941	8	FSM	ENSG00000148303.17	ENST00000468019.5	941	8	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	1941.44053396924	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTGAGTTTTCTGTACA	133241170	True	NA	15	True	ACTAAA	-16	NA	133348251	133351372	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_133348389_133348921_133349043_133349550_133349701_133349911_133350053_133350239_133350320_133350596_133350728_133351001_133351072_133351261
transcript_200062.known	chr9	+	1164	7	FSM	ENSG00000148303.17	ENST00000463740.5	1164	7	0	0	0	0	multi-exon	FALSE	canonical	3	2872	junction_1	1101.84219479117	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGTCTGTTGAGTATC	133241136	True	NA	20	True	CATAAA	-31	NA	133348217	133351426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_133348247_133348921_133349043_133349550_133349701_133349911_133350053_133350239_133350728_133351001_133351072_133351261
transcript_200073.known	chr9	+	947	6	FSM	ENSG00000148303.17	ENST00000496554.5	947	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	2306.46812247644	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACCACTGTCGCCTTCAC	133241136	True	NA	NA	False	NA	NA	NA	133348217	133350695	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_133348574_133348921_133349043_133349550_133349701_133349911_133350053_133350239_133350320_133350596
transcript_200078.known	chr9	-	1092	9	FSM	ENSG00000148290.10	ENST00000371974.8	1092	9	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_8	50.4002728167219	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTTCCCAAAACTTGAT	-133356453	False	NA	45	True	CATAAA	-25	NA	133356487	133351757	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133351983_133352060_133352143_133352445_133352609_133352693_133352767_133353748_133353941_133354658_133354742_133354823_133354958_133356268_133356321_133356399
transcript_200079.nnic	chr9	-	1031	9	NNC	ENSG00000148290.10	novel	1092	9	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_8	130.150633882436	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATGACTGGTTCATCAT	-133356498	False	NA	-2	True	TATAAA	-25	NA	133356532	133351804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_133351983_133352060_133352143_133352445_133352609_133352693_133352767_133353748_133353941_133354658_133354742_133354823_133354958_133356268_133356321_133356458
transcript_200080.known	chr9	-	991	8	FSM	ENSG00000148290.10	ENST00000615505.4	991	8	0	0	0	0	multi-exon	FALSE	canonical	2	28	junction_7	137.467621419647	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATGACTGGTTCATCAT	-133356451	False	NA	-2	True	TATAAA	-25	NA	133356485	133351804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133351983_133352060_133352143_133352445_133352609_133352693_133352767_133353748_133353941_133354658_133354742_133354823_133354958_133356399
transcript_200087.known	chr9	+	833	6	FSM	ENSG00000148291.10	ENST00000371964.5	833	6	0	0	0	0	multi-exon	TRUE	canonical	3	506	junction_5	31.4044582822248	167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCGAGAAAGCCTTCAGA	133350446	True	NA	14	True	AATAAA	-16	NA	133356549	133361158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_133356671_133356913_133357069_133357710_133357815_133359949_133360130_133360264_133360435_133361055
transcript_200100.known	chr9	-	3200	7	FSM	ENSG00000148248.14	ENST00000618229.4	3200	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	689.000100790188	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCGTTGCCCAGCCTGAA	-133376152	False	NA	-1	True	AATAAA	-32	NA	133376166	133361449	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133363760_133364839_133365027_133365984_133366029_133366598_133366676_133367258_133367446_133375238_133375389_133375921
transcript_200104.known	chr9	-	2930	6	FSM	ENSG00000148248.14	ENST00000371989.8	2930	6	0	0	0	0	multi-exon	FALSE	canonical	3	1400	junction_2	41.6797312851223	1730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGTGATCCTATAGCG	-133359154	True	NA	-15	True	AATAAA	-18	NA	133376060	133361463	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133363760_133364839_133365027_133365984_133366029_133366598_133366676_133367258_133367446_133375921
transcript_200105.known	chr9	-	3148	6	FSM	ENSG00000148248.14	ENST00000613129.4	3148	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	591.145531996986	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCGTTGCCCAGCCTGAA	-133376152	False	NA	-1	True	AATAAA	-32	NA	133376166	133361449	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133363760_133364839_133365027_133365984_133366029_133366598_133366676_133367258_133367544_133375921
transcript_200107.known	chr9	-	2863	5	FSM	ENSG00000148248.14	ENST00000545297.5	2863	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	642.721946101111	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCGTTGCCCAGCCTGAA	-133376152	False	NA	-1	True	AATAAA	-32	NA	133376166	133361449	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133363760_133365984_133366029_133366598_133366676_133367258_133367446_133375921
transcript_200114.known	chr9	-	2326	8	FSM	ENSG00000148300.12	ENST00000371942.8	2326	8	0	0	0	0	multi-exon	TRUE	canonical	3	239	junction_6	19.2491717288017	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCCTGTGGAGGCTCAG	-133410878	True	NA	-37	True	AATAAA	-20	NA	133418010	133406061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133407073_133407806_133407882_133408767_133408843_133410984_133411074_133412298_133412493_133412777_133412922_133414664_133415012_133417619
transcript_200116.nic	chr9	-	516	2	ISM	ENSG00000148300.12	ENST00000371942.8	2326	8	-26	8851	-26	-2550	5prime_fragment	FALSE	canonical	3	272	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACCTCGCCTCAAGTGAA	-133410904	True	NA	NA	False	AAAAAG	-31	NA	133418036	133414912	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_133415012_133417619
transcript_200117.known	chr9	+	2880	6	FSM	ENSG00000160325.15	ENST00000540581.5	2880	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_5	46.1761843378164	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGCCTGTGTGTGAGT	133458853	True	NA	35	True	AATAAA	-43	NA	133459964	133470787	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_133460188_133463482_133463556_133465321_133465448_133467920_133468029_133468339_133468465_133468562
transcript_200121.known	chr9	+	2803	5	FSM	ENSG00000160325.15	ENST00000316948.9	2803	5	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_3	13.683932183404	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCCTGTCCCGAGGCTGC	133458866	True	NA	96	True	NA	NA	NA	133459977	133470848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_133460188_133463482_133463556_133465321_133465448_133467920_133468029_133468562
transcript_200122.known	chr9	+	2754	5	FSM	ENSG00000160325.15	ENST00000542192.5	2754	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	45.1961004955074	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGCCTGTGTGTGAGT	133458853	True	NA	35	True	AATAAA	-43	NA	133459964	133470787	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_133460188_133463482_133463556_133467920_133468029_133468339_133468465_133468562
transcript_200123.nnic	chr9	+	2811	5	NNC	ENSG00000160325.15	novel	2803	5	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.5955225955871	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTTGGTGCCTGTG	133458866	True	NA	28	True	AATAAA	-36	NA	133459977	133470780	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_133460188_133463406_133463556_133465321_133465448_133467920_133468029_133468562
transcript_200126.known	chr9	+	2688	4	FSM	ENSG00000160325.15	ENST00000291722.11	2688	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	37.3838943337309	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCCTGTCCCGAGGCTGC	133458855	True	NA	96	True	NA	NA	NA	133459966	133470848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_133460188_133463482_133463556_133467920_133468029_133468562
transcript_200128.nnic	chr9	+	2535	3	NIC	ENSG00000160325.15	novel	2688	4	NA	NA	1	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	52	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTTGGTGCCTGTG	133458867	True	NA	28	True	AATAAA	-36	NA	133459978	133470780	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_133460188_133467920_133468029_133468562
transcript_200132.known	chr9	-	2491	10	FSM	ENSG00000160326.14	ENST00000371899.9	2491	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	41.5365375376581	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCTAGCGAGGAAAGAGTG	-133477247	True	NA	-15	True	AATAAA	-16	NA	133479099	133471093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133472177_133473104_133473251_133473414_133473601_133473979_133474089_133474960_133475114_133475399_133475612_133476236_133476337_133477034_133477242_133478253_133478417_133478967
transcript_200154.known	chr9	-	2301	9	FSM	ENSG00000160326.14	ENST00000371897.8	2301	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	50.3878705642539	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCTAGCGAGGAAAGAGT	-133477244	True	NA	-16	True	AATAAA	-15	NA	133479096	133471094	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133472177_133473104_133473251_133473979_133474089_133474960_133475114_133475399_133475612_133476236_133476337_133477034_133477242_133478253_133478417_133478967
transcript_200208.known	chr9	-	2778	3	FSM	ENSG00000196990.9	ENST00000673969.1	2778	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCGTGCAGCGTCTTCCG	-133609232	True	NA	-5	True	AATAAA	-13	NA	133609389	133577080	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133579430_133580130_133580247_133609076
transcript_200214.known	chr9	-	3215	21	FSM	ENSG00000123453.19	ENST00000439388.6	3215	21	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_20	11.2795168336237	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCGAAGCAAATAGGCTTC	-133737627	True	NA	-13	True	AGTAAA	-25	NA	133738352	133663559	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133664015_133666734_133666871_133670583_133670753_133671534_133671698_133685192_133685287_133690379_133690528_133694257_133694372_133696222_133696362_133702915_133703030_133704947_133705032_133708286_133708429_133712618_133712710_133713037_133713125_133717325_133717456_133718937_133719043_133729764_133729866_133730063_133730188_133731304_133731485_133732422_133732602_133733842_133734204_133738253
transcript_200221.known	chr9	-	4851	30	FSM	ENSG00000160293.17	ENST00000371850.8	4851	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	71.4980022670615	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGGTCAGCCTTTCGTA	-133992290	False	1467	-2	True	AATAAA	-19	NA	133992324	133761893	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133764110_133768441_133768597_133769416_133769504_133770377_133770502_133771958_133772047_133774934_133775052_133776027_133776081_133777388_133777464_133778761_133778890_133779917_133779940_133780693_133780711_133783502_133783592_133784316_133784419_133785775_133785886_133787245_133787261_133788353_133788487_133789257_133789344_133791782_133791870_133795667_133795737_133796428_133796525_133797709_133797810_133806080_133806182_133807257_133807327_133809039_133809139_133810190_133810206_133812113_133812217_133834271_133834341_133861373_133861433_133939102_133939220_133992074
transcript_200222.known	chr9	-	5101	28	FSM	ENSG00000160293.17	ENST00000371851.1	5101	28	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	43.3765533120035	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGGTCAGCCTTTCGTA	-133992570	False	NA	-2	True	AATAAA	-19	NA	133992604	133761893	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133764110_133768441_133768597_133769416_133769504_133770377_133770502_133771958_133772047_133774934_133775052_133776027_133776081_133777388_133777464_133778761_133778890_133779917_133779940_133780693_133780711_133783502_133783592_133784316_133784419_133785775_133785886_133788353_133788487_133789257_133789344_133791782_133791870_133795667_133795737_133796428_133796525_133797709_133797810_133806080_133806182_133807257_133807327_133809039_133809139_133812113_133812217_133834271_133834341_133861373_133861433_133939102_133939220_133992074
transcript_200229.known	chr9	-	4691	27	FSM	ENSG00000160293.17	ENST00000406606.7	4691	27	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_24	22.819201921438	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGGTCAGCCTTTCGTA	-133992247	False	NA	-2	True	AATAAA	-19	NA	133992281	133761893	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_133764110_133768441_133768597_133770377_133770502_133771958_133772047_133774934_133775052_133776027_133776081_133777388_133777464_133778761_133778890_133779917_133779940_133780693_133780711_133783502_133783592_133784316_133784419_133785775_133785886_133788353_133788487_133789257_133789344_133791782_133791870_133795667_133795737_133796428_133796525_133797709_133797810_133806080_133806182_133807257_133807327_133809039_133809139_133812113_133812217_133834271_133834341_133861373_133861433_133939102_133939220_133992074
transcript_200249.known	chr9	-	5661	12	FSM	ENSG00000169925.17	ENST00000303407.12	5661	12	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_2	28.745966299855	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTTTTTTTTTTTTGCA	-134060606	True	NA	1	True	AATAAA	-26	NA	134068026	134030304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_134033706_134034700_134034830_134036031_134036325_134040033_134040270_134041759_134041952_134045292_134045422_134048082_134048455_134050373_134050589_134051561_134051710_134052305_134052444_134053264_134053591_134067944
transcript_200259.nic	chr9	-	2171	10	ISM	ENSG00000169925.17	ENST00000303407.12	5661	12	-57	5744	-57	-21	5prime_fragment	FALSE	canonical	3	192	junction_5	23.0335236096552	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAGGAAACCGTTCTGTA	-134060663	True	NA	NA	False	NA	NA	NA	134068083	134036048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_134036325_134040033_134040270_134041759_134041952_134045292_134045422_134048082_134048455_134050373_134050589_134051561_134051710_134052305_134052444_134053264_134053591_134067944
transcript_200265.nic	chr9	-	1725	9	ISM	ENSG00000169925.17	ENST00000303407.12	5661	12	-64	9906	-64	-4183	5prime_fragment	FALSE	canonical	3	192	junction_4	24.0048823158957	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGGAGAAGAAGG	-134060670	True	NA	-43	True	AGTAAA	-10	NA	134068090	134040210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_134040270_134041759_134041952_134045292_134045422_134048082_134048455_134050373_134050589_134051561_134051710_134052305_134052444_134053264_134053591_134067944
transcript_200273.nic	chr9	-	2680	6	ISM	ENSG00000169925.17	ENST00000303407.12	5661	12	-151	16530	-151	1167	5prime_fragment	FALSE	canonical	3	192	junction_1	25.3408760700967	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTCACTTTAAAGTCATG	-134068094	False	NA	-11	True	AATAAA	-16	NA	134068177	134046834	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_134048455_134050373_134050589_134051561_134051710_134052305_134052444_134053264_134053591_134067944
transcript_200276.known	chr9	+	5682	3	FSM	ENSG00000235106.10	ENST00000603928.3	5682	3	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	12.5	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAACTCACCAAGTGTCA	134024444	True	NA	NA	False	ATTAAA	-17	NA	134025480	134031587	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_134025537_134025844_134026091_134026207
transcript_200278.known	chr9	+	2300	2	FSM	ENSG00000235106.10	ENST00000432807.1	2300	2	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCTTCCTCACACTTATT	134024458	True	NA	NA	False	AATAAA	-19	NA	134025494	134028102	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_134025537_134025844
transcript_200296.known	chr9	+	3157	14	FSM	ENSG00000196363.10	ENST00000358625.4	3157	14	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_1	27.1105560348863	641	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTCTGGTGAGAATTTC	134126613	True	NA	22	True	AATAAA	-19	NA	134136081	134159968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_134136201_134139819_134139959_134140702_134140812_134141509_134141584_134141948_134142039_134142332_134142423_134142635_134142720_134148287_134148344_134151982_134152030_134154465_134154542_134155339_134155374_134155692_134155768_134156505_134156594_134157892
transcript_200318.known	chr9	+	5537	10	FSM	ENSG00000186350.12	ENST00000481739.2	5537	10	0	0	0	0	multi-exon	TRUE	canonical	3	57	junction_6	6.18440891114478	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCCGTGTGGGGACTTTT	134325411	True	NA	28	True	AATACA	-18	NA	134326454	134440585	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_134326660_134401631_134401883_134408148_134408300_134408939_134409120_134417157_134417328_134421675_134421806_134429107_134429241_134431904_134431997_134434101_134434208_134436466
transcript_200323.known	chr9	+	2591	6	FSM	ENSG00000130558.20	ENST00000252854.8	2591	6	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	39.9068916354055	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGCTTCACTTGTCA	135075488	False	NA	9	True	AATAAA	-13	NA	135075519	135121178	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_135075803_135090194_135090345_135095863_135096020_135098285_135098506_135106748_135106856_135119503
transcript_200325.known	chr9	+	1014	4	FSM	ENSG00000130558.20	ENST00000277415.15	1014	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	61.9480068731477	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGTTCTGAGGACTGT	135075411	False	NA	18	True	AATAAA	-17	NA	135075421	135098107	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_135075803_135090194_135090345_135095863_135096020_135097780
transcript_200327.known	chr9	+	568	2	FSM	ENSG00000130558.20	ENST00000371801.4	568	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTTGGTATTCTCCATT	135075652	False	NA	11	True	AATAGA	-9	NA	135075665	135076487	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_135075803_135076056
transcript_200331.known	chr9	+	4951	4	FSM	ENSG00000196422.11	ENST00000356818.7	4951	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	20.9496751499609	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTACTGTTCTTTTTAAAT	135479244	True	NA	16	True	AATAAA	-16	NA	135479781	135488892	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_135480023_135482682_135482816_135483949_135484083_135484448
transcript_200332.nic	chr9	+	4859	4	NIC	ENSG00000196422.11	novel	936	5	NA	NA	-87	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	40.3016404408335	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTACTGTTCTTTTTAAAT	135479528	False	NA	16	True	AATAAA	-16	NA	135479575	135488892	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_135479725_135482682_135482816_135483949_135484083_135484448
transcript_200335.known	chr9	+	4640	3	FSM	ENSG00000196422.11	ENST00000604351.5	4640	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	56	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACTGTTCTTTTTAAATC	135478934	True	NA	17	True	AATAAA	-17	NA	135479662	135488893	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_135479725_135483949_135484083_135484448
transcript_200337.known	chr9	-	643	2	FSM	ENSG00000225361.4	ENST00000455039.3	643	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACCGTAATCTGAAACAAA	-135480669	True	NA	NA	False	CATAAA	-20	NA	135480777	135468171	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_135468710_135480672
transcript_200338.known	chr9	+	881	5	FSM	ENSG00000122140.11	ENST00000485333.5	881	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	267.709730865353	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCACCTCTACTGCAGGC	135487391	True	NA	NA	False	NA	NA	NA	135500706	135503976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_135500754_135500997_135501124_135501843_135501974_135503135_135503279_135503541
transcript_200339.known	chr9	+	1458	4	FSM	ENSG00000122140.11	ENST00000241600.10	1458	4	0	0	0	0	multi-exon	FALSE	canonical	3	563	junction_1	47.6864760702655	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGAGTTTGGGGCTCT	135487366	True	NA	14	True	AATAAA	-22	NA	135500681	135504671	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_135500754_135500997_135501124_135501843_135501974_135503541
transcript_200341.known	chr9	+	551	4	FSM	ENSG00000122140.11	ENST00000462948.5	551	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	294.13262314813	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAACAGACAGCCACGCAC	135487399	True	NA	NA	False	NA	NA	NA	135500714	135503594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_135500754_135500997_135501327_135501843_135501974_135503541
transcript_200344.known	chr9	-	1278	3	FSM	ENSG00000160345.13	ENST00000371789.7	1278	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	63.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCGTCTCGTCTGACGT	-135500421	True	NA	-1	True	ATTAAA	-19	NA	135500518	135495180	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_135495570_135498584_135498664_135499708
transcript_200345.known	chr9	-	675	3	FSM	ENSG00000160345.13	ENST00000429260.7	675	3	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	8	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCGTCTCGTCTGACGT	-135498319	True	NA	-1	True	ATTAAA	-19	NA	135499869	135495180	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_135495616_135498584_135498664_135499708
transcript_200351.nnic	chr9	-	1855	10	NNC	ENSG00000130560.9	novel	838	6	NA	NA	-25	8298	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	180.591620329774	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTCCAGCTGTAACT	-135957960	True	NA	-16	True	AATAAA	-16	NA	135961398	135924670	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_135925188_135938221_135938361_135939672_135939760_135945027_135945251_135945888_135945998_135946268_135946372_135947797_135947906_135953679_135953754_135955294_135955416_135961024
transcript_200354.known	chr9	-	1860	10	FSM	ENSG00000130560.9	ENST00000371756.4	1860	10	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_2	35.9468056926644	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGTCTTCGTCTTTTC	-135957935	True	NA	-5	True	AATAAA	-14	NA	135961373	135932968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_135933516_135938221_135938361_135939672_135939760_135945027_135945251_135945888_135945998_135946268_135946372_135947797_135947906_135953679_135953754_135955294_135955416_135961024
transcript_200357.nic	chr9	-	2523	9	NIC	ENSG00000130560.9	novel	1860	10	NA	NA	-25	0	intron_retention	FALSE	canonical	3	532	junction_2	37.9849888113713	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGTCTTCGTCTTTTC	-135957960	True	NA	-5	True	AATAAA	-14	NA	135961398	135932968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_135933516_135938221_135938361_135939672_135939760_135945027_135945998_135946268_135946372_135947797_135947906_135953679_135953754_135955294_135955416_135961024
transcript_200360.nic	chr9	-	568	3	ISM	ENSG00000130560.9	ENST00000478485.1	773	4	-186	6165	-25	-5804	5prime_fragment	FALSE	canonical	3	577	junction_1	40.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAATTTCAAAGTTTGCA	-135957960	True	NA	NA	False	AAGAAA	-2	NA	135961398	135953680	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_135953754_135955294_135955416_135961024
transcript_200363.known	chr9	-	6903	6	FSM	ENSG00000148411.8	ENST00000277554.4	6903	6	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_5	12.7843654515975	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCCTGGACTTGGCTTGG	-136094428	True	NA	-1	True	AATAAA	-17	NA	136095289	136006536	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136012025_136013198_136013297_136013863_136013970_136016264_136016430_136049635_136050581_136095188
transcript_200366.known	chr9	-	1274	1	FSM	ENSG00000260193.1	ENST00000566567.1	1274	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCCTGCTCCCATAGT	-136109061	False	50	3	True	NA	NA	NA	136109081	136107807	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136107800_136109100
transcript_200370.known	chr9	-	1981	3	FSM	ENSG00000238227.8	ENST00000557985.2	1981	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	98	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGGAGTGATTGCTTAA	-136118494	False	NA	-18	True	ATTAAA	-18	NA	136118534	136114588	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136114951_136115455_136117025_136118484
transcript_200372.known	chr9	-	648	2	FSM	ENSG00000238227.8	ENST00000447934.1	648	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACTTCGACGTGTACATC	-136118234	False	NA	NA	False	NA	NA	NA	136118274	136116785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136117025_136117865
transcript_200373.known	chr9	-	2827	2	FSM	ENSG00000238227.8	ENST00000418388.6	2827	2	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	0	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGGAGTGATTGCTTAA	-136116068	True	NA	-18	True	ATTAAA	-18	NA	136118875	136114588	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136117025_136118484
transcript_200374.known	chr9	-	4501	12	FSM	ENSG00000165661.17	ENST00000358701.10	4501	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	9.23700785154948	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGATTCTTTTGAAATGT	-136241173	True	NA	NA	False	AATAAA	-22	NA	136245812	136206332	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136209276_136211263_136211453_136215153_136215305_136216599_136216723_136218678_136218809_136219029_136219165_136221795_136221942_136223762_136223854_136224006_136224113_136224860_136224910_136226773_136226875_136245475
transcript_200384.known	chr9	+	3566	14	FSM	ENSG00000160360.13	ENST00000440944.6	3566	14	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_10	6.75347817466091	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCCGTATGGGCTTAG	136326725	True	NA	15	True	AATAAA	-15	NA	136327538	136359601	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136327764_136334446_136334669_136335965_136336102_136336920_136337073_136337440_136337565_136337845_136337962_136338554_136338711_136339706_136339816_136340869_136340994_136348696_136348768_136349586_136349764_136355689_136355847_136356341_136356551_136358013
transcript_200387.known	chr9	+	2270	9	FSM	ENSG00000160360.13	ENST00000616132.4	2270	9	0	0	0	0	multi-exon	TRUE	canonical	3	42	junction_3	5.40688218847054	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGGGCCTCACTATGTTG	136326662	True	NA	NA	False	ATTAAA	-13	NA	136327475	136341836	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136327764_136334446_136334669_136335965_136336102_136336920_136337073_136337440_136337565_136337845_136337962_136338554_136338711_136339706_136339816_136340869
transcript_20039.known	chr1	+	1789	9	FSM	ENSG00000143819.13	ENST00000614058.4	1789	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	98.0617630628779	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCGGCTGGAACTCAGT	225810400	False	NA	26	True	GATAAA	-13	NA	225810411	225845559	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_225810616_225828724_225828913_225831778_225831960_225838653_225838882_225839216_225839347_225839828_225840038_225842365_225842475_225844497_225844624_225845145
transcript_200390.known	chr9	-	3096	3	FSM	ENSG00000213221.5	ENST00000371738.4	3096	3	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_2	28.5	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGCGGGGGGGCGCTACG	-136362073	True	NA	NA	False	AATAAA	-18	NA	136363744	136359482	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136362181_136362988_136363129_136363486
transcript_200404.nnic	chr9	-	4657	24	NNC	ENSG00000165684.6	novel	4693	24	NA	NA	-48	0	at_least_one_novel_splicesite	TRUE	canonical	3	6	junction_7	26.4348541188964	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGACACAGGCTGTTGTG	-136400212	False	NA	-9	True	AATAAA	-21	NA	136400224	136375576	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_136375801_136376348_136376482_136377542_136379300_136379836_136379865_136380739_136380851_136381321_136381393_136381823_136381990_136382252_136382337_136383185_136383669_136383952_136384033_136384719_136384815_136387484_136387580_136387741_136387849_136388443_136388592_136391941_136392107_136392521_136392595_136392672_136392778_136394248_136394331_136394799_136394879_136395297_136395424_136395602_136395771_136396976_136397024_136398298_136398438_136400133
transcript_200408.nic	chr9	-	4741	24	FSM	ENSG00000165684.6	ENST00000684778.1	4693	24	-54	6	-48	0	multi-exon	FALSE	canonical	3	52	junction_11	21.3017744674742	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGACACAGGCTGTTGTG	-136400212	False	NA	-9	True	AATAAA	-21	NA	136400224	136375576	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136375801_136376348_136376482_136377542_136379300_136379836_136379865_136380739_136380851_136381321_136381393_136381823_136382074_136382252_136382337_136383185_136383669_136383952_136384033_136384719_136384815_136387484_136387580_136387741_136387849_136388443_136388592_136391941_136392107_136392521_136392595_136392672_136392778_136394248_136394331_136394799_136394879_136395297_136395424_136395602_136395771_136396976_136397024_136398298_136398438_136400133
transcript_200413.nnic	chr9	-	4713	24	NIC	ENSG00000165684.6	novel	4693	24	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_11	24.2566616266609	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGACACAGGCTGTTGTG	-136400212	False	NA	-9	True	AATAAA	-21	NA	136400224	136375576	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_136375801_136376348_136376482_136377542_136379300_136379836_136379865_136380739_136380851_136381321_136381393_136381823_136382074_136382252_136382337_136383185_136383669_136383952_136384033_136384719_136384815_136387512_136387580_136387741_136387849_136388443_136388592_136391941_136392107_136392521_136392595_136392672_136392778_136394248_136394331_136394799_136394879_136395297_136395424_136395602_136395771_136396976_136397024_136398298_136398438_136400133
transcript_200449.known	chr9	-	1398	14	ISM	ENSG00000165684.6	ENST00000684778.1	4693	24	2	9215	2	-8	5prime_fragment	FALSE	canonical	3	52	junction_1	14.636422106205	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGGTCGGTGGAATTTA	-136394139	True	NA	NA	False	NA	NA	NA	136400168	136384785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_136384815_136387484_136387580_136387741_136387849_136388443_136388592_136391941_136392107_136392521_136392595_136392672_136392778_136394248_136394331_136394799_136394879_136395297_136395424_136395602_136395771_136396976_136397024_136398298_136398438_136400133
transcript_200451.known	chr9	-	2391	10	FSM	ENSG00000165689.17	ENST00000357365.8	2391	10	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_8	169.428742441866	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTTCTCTGCTGACT	-136403970	True	NA	-5	True	AATAAA	-18	NA	136410614	136401921	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136402888_136404054_136404195_136404630_136404694_136405090_136405203_136405904_136405979_136407144_136407562_136407825_136407939_136408998_136409068_136410089_136410240_136410327
transcript_200456.known	chr9	-	2314	9	FSM	ENSG00000165689.17	ENST00000298537.11	2314	9	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_8	142.100976421698	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTCTCTTCTCTGCTG	-136403965	True	NA	-8	True	AATAAA	-15	NA	136410609	136401924	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136402888_136404054_136404195_136404630_136404694_136405090_136405203_136405904_136405979_136407144_136407562_136407825_136407939_136410089_136410240_136410327
transcript_200458.nic	chr9	-	2323	8	ISM	ENSG00000165689.17	ENST00000298537.11	2314	9	79	0	63	0	intron_retention	FALSE	canonical	3	174	junction_7	110.593021147497	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTCTCTTCTCTGCTG	-136403886	True	NA	-8	True	AATAAA	-15	NA	136410530	136401924	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_-_136402888_136404054_136404195_136404630_136404694_136405090_136405203_136405904_136405979_136407144_136407562_136407825_136407939_136410089
transcript_200459.known	chr9	-	2129	8	FSM	ENSG00000165689.17	ENST00000371725.7	2129	8	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_7	121.251804110289	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTAATAAATTCTGTAG	-136403956	True	NA	-34	True	TTTAAA	-36	NA	136410600	136401950	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136402888_136404054_136404195_136404630_136404694_136405090_136405203_136405904_136405979_136407144_136407562_136407825_136407939_136410327
transcript_20046.known	chr1	+	1635	9	FSM	ENSG00000143819.13	ENST00000272167.10	1635	9	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_4	20.4935203174076	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGCTGGAACTCAGTGACA	225796016	True	NA	30	True	GATAAA	-17	NA	225810123	225845563	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_225810170_225828724_225828913_225831778_225831960_225838653_225838882_225839216_225839347_225839828_225840038_225842365_225842475_225844497_225844624_225845145
transcript_200478.known	chr9	+	2086	13	FSM	ENSG00000165688.12	ENST00000371717.8	2086	13	0	0	0	0	multi-exon	FALSE	canonical	3	762	junction_6	108.476155854127	2020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACGGTGTTTTCCTTCTCG	136403264	True	NA	26	True	AATAAA	-19	NA	136410657	136423761	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136410740_136411996_136412200_136412489_136412570_136412809_136412893_136414552_136414648_136416290_136416392_136416950_136417215_136418016_136418110_136418554_136418674_136418827_136418919_136419043_136419107_136421831_136421977_136423094
transcript_200498.nic	chr9	+	2679	12	NIC	ENSG00000165688.12	novel	2086	13	NA	NA	-18	0	intron_retention	FALSE	canonical	3	985	junction_6	68.2879174482682	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACGGTGTTTTCCTTCTC	136403229	True	NA	25	True	AATAAA	-18	NA	136410622	136423760	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_136410740_136411996_136412200_136412489_136412570_136412809_136412893_136414552_136414648_136416290_136417215_136418016_136418110_136418554_136418674_136418827_136418919_136419043_136419107_136421831_136421977_136423094
transcript_200505.known	chr9	+	1987	12	FSM	ENSG00000165688.12	ENST00000399219.7	1987	12	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	317.498122594827	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACGGTGTTTTCCTTCTC	136403267	True	NA	25	True	AATAAA	-18	NA	136410660	136423760	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136410740_136411996_136412200_136412489_136412570_136412809_136412893_136416290_136416392_136416950_136417215_136418016_136418110_136418554_136418674_136418827_136418919_136419043_136419107_136421831_136421977_136423094
transcript_200528.known	chr9	+	505	4	FSM	ENSG00000165688.12	ENST00000614402.4	505	4	0	0	0	0	multi-exon	FALSE	canonical	3	1031	junction_2	56.938563381947	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGCCCCTCCCAGCGGG	136403280	True	NA	NA	False	NA	NA	NA	136410673	136412965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136410740_136411996_136412200_136412489_136412570_136412809
transcript_200529.known	chr9	+	590	2	FSM	ENSG00000165688.12	ENST00000620412.4	590	2	0	0	0	0	multi-exon	FALSE	canonical	3	1136	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCGAGATATGAAGCGAAA	136403264	True	NA	NA	False	NA	NA	NA	136410657	136412504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136410740_136411996
transcript_200530.nnic	chr9	-	3411	10	NNC	ENSG00000148384.14	novel	3417	10	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	34.8704834678837	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTCTGGCCAAAGACT	-136439867	False	NA	-4	True	AATAAA	-22	NA	136439886	136428618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_136429761_136430276_136430414_136431001_136431118_136431823_136431986_136432478_136432587_136432955_136433076_136433154_136433280_136434036_136434135_136434739_136434864_136438607
transcript_200534.known	chr9	-	3315	10	FSM	ENSG00000148384.14	ENST00000676019.1	3315	10	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_7	33.3858845015467	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTCTGGCCAAAGACT	-136438269	True	NA	-4	True	AATAAA	-22	NA	136439845	136428618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136429808_136430276_136430414_136431001_136431118_136431823_136431986_136432478_136432587_136432955_136433076_136433154_136433178_136434036_136434135_136434739_136434864_136438607
transcript_200535.known	chr9	-	3417	10	FSM	ENSG00000148384.14	ENST00000371712.4	3417	10	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_7	18.0684569292031	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTCTGGCCAAAGACT	-136438269	True	NA	-4	True	AATAAA	-22	NA	136439845	136428618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136429808_136430276_136430414_136431001_136431118_136431823_136431986_136432478_136432587_136432955_136433076_136433154_136433280_136434036_136434135_136434739_136434864_136438607
transcript_200547.nic	chr9	-	3951	9	NIC	ENSG00000148384.14	novel	3417	10	NA	NA	-41	0	intron_retention	FALSE	canonical	3	69	junction_6	15.9216833280907	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTCTGGCCAAAGACT	-136439867	False	NA	-4	True	AATAAA	-22	NA	136439886	136428618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_136429808_136430276_136430414_136431001_136431118_136431823_136432587_136432955_136433076_136433154_136433280_136434036_136434135_136434739_136434864_136438607
transcript_20055.known	chr1	-	1680	7	FSM	ENSG00000143811.20	ENST00000343818.11	1680	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	428.279276744613	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTTGTTAGGCTTAAT	-225908514	True	NA	-3	True	AATAAA	-18	NA	225924250	225919877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_225920621_225921207_225921372_225921551_225921645_225921857_225922080_225922203_225922384_225923700_225923772_225924043
transcript_200557.nic	chr9	-	4708	8	NIC	ENSG00000148384.14	novel	3417	10	NA	NA	-41	0	intron_retention	FALSE	canonical	3	94	junction_2	8.83869045614744	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTCTGGCCAAAGACT	-136439867	False	NA	-4	True	AATAAA	-22	NA	136439886	136428618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_136429808_136430276_136430414_136431001_136431118_136431823_136432587_136432955_136433076_136433154_136434135_136434739_136434864_136438607
transcript_200564.known	chr9	-	4311	1	FSM	ENSG00000148384.14	ENST00000635815.1	4311	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGGGCGTGGTGGCACTG	-136438247	True	NA	NA	False	AATAAA	-17	NA	136439823	136435512	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136435500_136439800
transcript_200571.nnic	chr9	+	2376	4	NNC	ENSG00000237886.1	novel	738	3	NA	NA	-94	-151	intron_retention	FALSE	canonical	2	15	junction_1	5.90668171555645	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCGAGGTTGGGCATTTT	136546092	False	NA	4	True	TATAAA	-15	NA	136546117	136549742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_136547558_136547841_136548102_136548743_136548809_136549131
transcript_200577.nnic	chr9	+	2312	3	NNC	ENSG00000237886.1	novel	738	3	NA	NA	-94	-150	intron_retention	FALSE	canonical	2	14	junction_2	0.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGAGGTTGGGCATTTTT	136546092	False	NA	5	True	TATAAA	-16	NA	136546117	136549743	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_136547558_136547841_136548102_136549131
transcript_200578.known	chr9	+	738	3	FSM	ENSG00000237886.1	ENST00000429224.1	738	3	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAGGCAGCTGTGGGAAC	136545504	True	NA	NA	False	NA	NA	NA	136546211	136549449	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136546372_136547841_136548102_136549131
transcript_200579.nnic	chr9	+	2612	3	NNC	ENSG00000237886.1	novel	738	3	NA	NA	-46	-151	intron_retention	FALSE	canonical	2	27	junction_1	0.5	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCGAGGTTGGGCATTTT	136545458	True	NA	4	True	TATAAA	-15	NA	136546165	136549742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_136548102_136548743_136548809_136549131
transcript_200585.known	chr9	+	1282	9	FSM	ENSG00000172889.16	ENST00000371698.3	1282	9	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_1	131.034108155091	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTGTCAGTGGATGG	136660243	True	NA	NA	False	AATAAA	-13	NA	136665791	136672678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136665818_136668240_136668363_136668556_136668674_136669605_136669722_136669913_136670010_136670168_136670331_136670949_136671015_136671925_136672089_136672263
transcript_200592.nnic	chr9	+	1195	8	NIC	ENSG00000172889.16	novel	1282	9	NA	NA	-71	0	combination_of_known_splicesites	FALSE	canonical	3	134	junction_5	228.599284016948	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTGTCAGTGGATGG	NA	False	NA	NA	False	AATAAA	-13	NA	136665716	136672678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_136665818_136668240_136668363_136668556_136668674_136669605_136669722_136669913_136670010_136670949_136671015_136671925_136672089_136672263
transcript_200607.known	chr9	-	1357	7	FSM	ENSG00000169692.13	ENST00000538402.1	1357	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	154.514742194897	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGCTGGGGAGCTGTGG	-136683120	True	NA	-12	True	TATAAA	-12	NA	136687396	136673149	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136673279_136673399_136673928_136674734_136674808_136676584_136676681_136676960_136677137_136677422_136677557_136687175
transcript_200609.known	chr9	-	1546	6	FSM	ENSG00000169692.13	ENST00000371696.7	1546	6	0	0	0	0	multi-exon	FALSE	canonical	2	356	junction_5	32.2738284063109	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGAGCTGTGGTCACTCA	-136683181	True	NA	-5	True	TATAAA	-19	NA	136687457	136673142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136673928_136674734_136674808_136676584_136676681_136676960_136677137_136677422_136677557_136687175
transcript_200616.known	chr9	-	1391	5	FSM	ENSG00000169692.13	ENST00000371694.7	1391	5	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_2	169.997610277321	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGAGCTGTGGTCACTCA	-136683122	True	NA	-5	True	TATAAA	-19	NA	136687398	136673142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136673928_136674734_136674808_136676960_136677137_136677422_136677557_136687175
transcript_20062.nic	chr1	-	3083	6	NIC	ENSG00000143811.20	novel	1680	7	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_5	461.150127398876	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTTGTTAGGCTTAAT	NA	False	NA	-3	True	AATAAA	-18	NA	225924336	225919877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_225920621_225921207_225921372_225921551_225921645_225921857_225922080_225922203_225923772_225924043
transcript_200634.known	chr9	+	2358	5	FSM	ENSG00000165716.11	ENST00000371692.9	2358	5	0	0	0	0	multi-exon	FALSE	canonical	3	431	junction_4	56.7951362354207	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGGGTCTTAGGTTCCAG	136710808	True	NA	35	True	AATAAA	-40	NA	136712571	136724742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136712729_136717576_136717712_136721920_136722029_136722124_136722302_136722961
transcript_200637.nnic	chr9	+	1638	5	NNC	ENSG00000165716.11	novel	2358	5	NA	NA	-17	0	intron_retention	FALSE	canonical	3	39	junction_2	203.209251757886	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCCTGAGCCCCCATCGA	136710791	True	NA	37	True	AATAAA	-28	NA	136712554	136724050	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_136712729_136717576_136717712_136721965_136722029_136722124_136722302_136722961
transcript_20064.known	chr1	-	1549	6	FSM	ENSG00000143811.20	ENST00000612039.4	1549	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	553.060358369681	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTTGTTAGGCTTAATC	NA	False	NA	-2	True	AATAAA	-19	NA	225924340	225919876	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_225920621_225921207_225921372_225921551_225921645_225922203_225922384_225923700_225923772_225924043
transcript_200640.known	chr9	-	789	5	FSM	ENSG00000233016.8	ENST00000416970.5	789	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	121.783362985262	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTCTTTAAGGATAATAT	-136720034	True	NA	-18	True	ATTAAA	-14	NA	136728184	136724657	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136724940_136725054_136725111_136726310_136726417_136727045_136727087_136727880
transcript_200643.known	chr9	-	1123	4	FSM	ENSG00000233016.8	ENST00000653276.1	1123	4	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_2	5.8878405775519	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGGGCTGTTTCCTAG	-136720028	True	NA	-99	True	GGGGCT	-14	NA	136728178	136724432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136725111_136726310_136726417_136727045_136727087_136727880
transcript_200646.known	chr9	-	1254	3	FSM	ENSG00000233016.8	ENST00000668354.1	1254	3	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_2	5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTCTTTAAGGATAATAT	-136719755	False	NA	-18	True	ATTAAA	-14	NA	136727905	136724657	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136725111_136726310_136727087_136727880
transcript_200648.known	chr9	-	2157	2	FSM	ENSG00000233016.8	ENST00000447221.1	2157	2	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-136720034	True	NA	NA	False	NA	NA	NA	136728184	136725233	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136727087_136727880
transcript_200650.known	chr9	-	1995	6	FSM	ENSG00000187922.14	ENST00000497771.6	1995	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.49857113690718	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTGGAGCCCGGGCAA	-136742779	True	NA	-2	True	AATAAA	-21	NA	136742940	136738169	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136739554_136739949_136740049_136740835_136740944_136741251_136741362_136741880_136742021_136742786
transcript_200653.known	chr9	-	1780	4	FSM	ENSG00000187922.14	ENST00000341040.11	1780	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2.82842712474619	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGAGCCCGGGCAACAT	-136742779	True	NA	1	True	AATAAA	-24	NA	136742940	136738166	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136739554_136739949_136740049_136741880_136742021_136742786
transcript_200661.known	chr9	+	3078	15	FSM	ENSG00000196642.19	ENST00000371663.10	3078	15	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	140.203278077488	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCACTCTGCGTGTGTCTG	136800273	True	NA	4	True	CATAAA	-10	NA	136807966	136841177	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136808327_136823524_136823660_136825778_136825827_136828493_136828547_136829392_136829485_136831720_136831862_136832261_136832371_136835741_136835846_136837345_136837663_136837861_136838016_136838908_136839122_136839221_136839487_136839693_136839866_136840153_136840213_136840321
transcript_20067.known	chr1	-	3149	5	FSM	ENSG00000143811.20	ENST00000478402.5	3149	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	496.996164472121	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTTGTTAGGCTTAAT	-225908542	True	NA	-3	True	AATAAA	-18	NA	225924278	225919877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_225920621_225921207_225921372_225921551_225921645_225921857_225923772_225924043
transcript_200671.known	chr9	+	2746	14	FSM	ENSG00000196642.19	ENST00000484471.6	2746	14	0	0	0	0	multi-exon	FALSE	canonical	2	38	junction_10	137.381643520273	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCGTGTGTCTGTTCTT	136800267	True	NA	9	True	CATAAA	-15	NA	136807960	136841182	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136808327_136823524_136823660_136825778_136825827_136828493_136828547_136829392_136829485_136831720_136831862_136832264_136832371_136835741_136835846_136837345_136837663_136837861_136837981_136839313_136839487_136839693_136839866_136840153_136840213_136840321
transcript_200673.nic	chr9	+	2311	14	ISM	ENSG00000196642.19	ENST00000311502.12	3104	15	-100	1002	-95	0	5prime_fragment	FALSE	canonical	3	412	junction_9	61.9054442167136	1094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAGAAGAAGAAAAAAGG	136807743	False	NA	13	True	NA	NA	NA	136807847	136840185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_136808327_136823524_136823660_136825778_136825827_136828493_136828547_136829392_136829485_136831720_136831862_136832264_136832371_136835741_136835846_136837345_136837663_136837861_136838016_136838908_136839122_136839221_136839487_136839693_136839866_136840153
transcript_200685.nic	chr9	+	2281	13	ISM	ENSG00000196642.19	ENST00000311502.12	3104	15	-100	1320	-95	-318	5prime_fragment	TRUE	canonical	3	412	junction_9	63.9146023134689	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGGGGGCACCAGAGTGC	136807743	False	NA	NA	False	GGGGCT	-38	NA	136807847	136839867	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_136808327_136823524_136823660_136825778_136825827_136828493_136828547_136829392_136829485_136831720_136831862_136832264_136832371_136835741_136835846_136837345_136837663_136837861_136838016_136838908_136839122_136839221_136839487_136839693
transcript_200702.known	chr9	+	1580	8	FSM	ENSG00000196642.19	ENST00000371671.9	1580	8	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_7	172.926786442667	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAGTCGTCAGATATTT	136800249	True	NA	11	True	AATAAA	-15	NA	136807942	136834340	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136808327_136823524_136823660_136825778_136825827_136828493_136828547_136829392_136829485_136831720_136831862_136832264_136832371_136833719
transcript_200711.known	chr9	+	735	6	FSM	ENSG00000272896.1	ENST00000456614.2	735	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	156.975666904142	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGCCTGACCACCGGCT	136787602	True	NA	NA	False	NA	NA	NA	136791378	136800595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136791425_136791946_136792031_136792250_136792359_136799101_136799224_136800001_136800170_136800388
transcript_200714.known	chr9	+	839	5	FSM	ENSG00000244187.8	ENST00000290079.9	839	5	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_1	44.1616349335031	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAAACCTTTATTACCCT	136787567	True	NA	12	True	AAAACA	-30	NA	136791343	136793317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136791425_136791710_136791778_136791946_136792031_136792250_136792359_136792818
transcript_200715.known	chr9	+	839	5	FSM	ENSG00000244187.8	ENST00000465017.5	839	5	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	138.378782694458	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAAGTTTCCACCTGACC	136787591	True	NA	27	True	AATAAA	-19	NA	136791367	136793256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136791425_136791625_136791778_136791946_136792031_136792250_136792359_136792818
transcript_200716.known	chr9	+	491	4	FSM	ENSG00000244187.8	ENST00000479737.1	491	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	182.970550150078	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGGCCGACCCTCCCCA	136787602	True	NA	NA	False	NA	NA	NA	136791378	136792902	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136791425_136791777_136792031_136792250_136792359_136792818
transcript_200718.known	chr9	+	683	4	FSM	ENSG00000244187.8	ENST00000483187.5	683	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	169.305115759159	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAAGTTTCCACCTGACC	136787595	True	NA	27	True	AATAAA	-19	NA	136791371	136793256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136791425_136791946_136792031_136792250_136792359_136792818
transcript_200726.known	chr9	+	985	5	FSM	ENSG00000054148.18	ENST00000371661.5	985	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1567.12555336195	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCGGCTTCTGAACTCT	136848703	False	NA	4	True	ATTAAA	-13	NA	136848723	136851022	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136848781_136849110_136849591_136850012_136850138_136850505_136850561_136850754
transcript_200727.known	chr9	+	577	3	FSM	ENSG00000054148.18	ENST00000247665.12	577	3	0	0	0	0	multi-exon	FALSE	canonical	3	3446	junction_2	188.5	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGGCTTCTGAACTCTGT	136819367	True	NA	6	True	ATTAAA	-15	NA	136849408	136851024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136849591_136850012_136850138_136850754
transcript_200728.known	chr9	+	618	4	FSM	ENSG00000054148.18	ENST00000497413.1	618	4	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_2	1647.42472429614	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTTCTGAACTCTGTCCT	136819384	True	NA	9	True	ATTAAA	-18	NA	136849425	136851027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136849591_136850012_136850138_136850505_136850561_136850754
transcript_200729.known	chr9	+	627	2	FSM	ENSG00000054148.18	ENST00000463215.1	627	2	0	0	0	0	multi-exon	FALSE	canonical	3	3446	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCGGCTTCTGAACTCT	136849628	False	NA	4	True	ATTAAA	-13	NA	136849778	136851022	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136850138_136850754
transcript_200730.known	chr9	-	662	5	FSM	ENSG00000107223.13	ENST00000224073.6	662	5	0	0	0	0	multi-exon	FALSE	canonical	3	1823	junction_1	149.47136013297	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTTCTGCTGGCTGTTT	-136847792	True	NA	-15	True	NA	NA	NA	136866308	136862118	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136862346_136862905_136863000_136863287_136863449_136863819_136863872_136866180
transcript_200733.known	chr9	-	790	5	FSM	ENSG00000107223.13	ENST00000371649.5	790	5	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_1	810.257790767852	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTTCTGCTGGCTGTTT	-136847769	True	NA	-15	True	NA	NA	NA	136866285	136862118	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136862497_136862905_136863000_136863287_136863449_136863819_136863872_136866180
transcript_200735.known	chr9	-	809	4	FSM	ENSG00000107223.13	ENST00000371648.4	809	4	0	0	0	0	multi-exon	FALSE	canonical	3	2096	junction_3	45.4606056566195	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGGAGTGCTCGTGTGC	-136847750	True	NA	NA	False	NA	NA	NA	136866266	136862489	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136863000_136863287_136863449_136863819_136863872_136866180
transcript_200739.nnic	chr9	+	2661	14	NNC	ENSG00000127191.18	novel	2266	11	NA	NA	-40	0	at_least_one_novel_splicesite	TRUE	canonical	2	11	junction_1	129.663971719712	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTCAGTGGCATCCATT	136882739	True	NA	12	True	ATTAAA	-14	NA	136886475	136926607	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_136886542_136889468_136889563_136889669_136889737_136890348_136890543_136898712_136898929_136899593_136899673_136900421_136900521_136908069_136908232_136909919_136909995_136916540_136916616_136920233_136920516_136921037_136921216_136923851_136924001_136925682
transcript_200751.known	chr9	+	2266	11	FSM	ENSG00000127191.18	ENST00000247668.7	2266	11	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	70.7814241167836	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTCAGTGGCATCCATT	136882779	True	NA	12	True	ATTAAA	-14	NA	136886515	136926607	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136886542_136898712_136898929_136899593_136899673_136900421_136900521_136908069_136908232_136909919_136909995_136916540_136916616_136920233_136920516_136921037_136921216_136923851_136924001_136925682
transcript_200752.nnic	chr9	+	2272	11	NNC	ENSG00000127191.18	novel	2266	11	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	96.4888076410938	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTCAGTGGCATCCATT	136882794	True	NA	12	True	ATTAAA	-14	NA	136886530	136926607	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_136886563_136898712_136898929_136899593_136899673_136900421_136900521_136908069_136908232_136909919_136909995_136916540_136916616_136920233_136920516_136921037_136921216_136923851_136924001_136925682
transcript_200764.known	chr9	-	2362	9	FSM	ENSG00000159069.14	ENST00000325285.8	2362	9	0	0	0	0	multi-exon	FALSE	canonical	3	512	junction_8	51.3771289096617	1124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTGTCCAGTCTCTGT	-136944541	False	197	-2	True	AATAAA	-16	NA	136944738	136940434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136941172_136941250_136941464_136941536_136941685_136942045_136942467_136942546_136942696_136942768_136942944_136943348_136943507_136943890_136944107_136944593
transcript_200769.nic	chr9	-	2270	9	NIC	ENSG00000159069.14	novel	2362	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	211.694355144392	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTGTCCAGTCTCTGT	-136944503	False	NA	-2	True	AATAAA	-16	NA	136944700	136940434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_136941172_136941250_136941464_136941536_136941685_136942099_136942467_136942546_136942696_136942768_136942944_136943348_136943507_136943890_136944107_136944593
transcript_20077.known	chr1	-	1626	4	FSM	ENSG00000243709.1	ENST00000272134.5	1626	4	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_3	37.6061460697879	315	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTGTAATTTTCTATT	-225887414	True	NA	-9	True	AATAAA	-38	NA	225889146	225886281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_225887091_225887398_225887639_225887785_225888033_225888816
transcript_20078.nic	chr1	-	1407	5	NIC	ENSG00000143768.13	novel	2019	4	NA	NA	-1	187	intron_retention	FALSE	canonical	3	15	junction_1	113.113880668997	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTCCTCTTTAGTTTAT	-225939462	True	NA	0	True	ATTAAA	-14	NA	225941221	225936410	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_225936578_225937382_225937805_225939360_225939601_225939755_225940003_225940890
transcript_200783.known	chr9	-	2392	8	FSM	ENSG00000159069.14	ENST00000483559.5	2392	8	0	0	0	0	multi-exon	FALSE	canonical	3	512	junction_7	54.9099448262	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTGTCCAGTCTCTGT	-136939789	True	NA	-2	True	AATAAA	-16	NA	136944688	136940434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136941172_136941250_136941464_136941536_136941685_136942045_136942696_136942768_136942944_136943348_136943507_136943890_136944107_136944593
transcript_200786.known	chr9	-	2339	8	FSM	ENSG00000159069.14	ENST00000459905.5	2339	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	222.375119735889	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTGTCCAGTCTCTGT	-136944499	False	NA	-2	True	AATAAA	-16	NA	136944696	136940434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_136941172_136941250_136941464_136941536_136941685_136942099_136942467_136942546_136942944_136943348_136943507_136943890_136944107_136944593
transcript_20079.known	chr1	-	2019	4	FSM	ENSG00000143768.13	ENST00000366820.10	2019	4	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_3	65.5031805843553	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGTCTGTTTTTAATT	-225939461	True	NA	-5	True	AATAAA	-14	NA	225941220	225936602	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_225937805_225939360_225939601_225939755_225940003_225940890
transcript_20081.nnic	chr1	-	2231	4	NNC	ENSG00000143768.13	novel	2019	4	NA	NA	-59	-3	intron_retention	FALSE	canonical	2	27	junction_1	124.111061374704	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCTGTGTCTGTTTTTA	-225939520	True	NA	-8	True	AATAAA	-11	NA	225941279	225936605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_225937961_225939360_225939601_225939755_225940003_225940890
transcript_200815.known	chr9	+	881	7	FSM	ENSG00000176919.13	ENST00000371634.7	881	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.25830573921179	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACTCTTCTGTCCACT	136945230	False	NA	NA	False	ATTAAA	-15	NA	136945242	136946975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136945459_136945633_136945771_136945928_136946000_136946084_136946193_136946464_136946567_136946650_136946690_136946767
transcript_200819.known	chr9	+	754	6	FSM	ENSG00000107317.13	ENST00000492068.2	754	6	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_3	4.58693797647189	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCACTCAGGCTTCATCC	NA	False	NA	-40	True	NA	NA	NA	136978811	136981692	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136979133_136979222_136979300_136979945_136980063_136980182_136980285_136980832_136980856_136981578
transcript_200820.known	chr9	+	808	7	FSM	ENSG00000148362.11	ENST00000371620.4	808	7	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_2	71.7139378983534	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGGTGGGGCTCTGAC	136988525	True	NA	23	True	AATAAA	-18	NA	136992421	136993976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_136992563_136992639_136992701_136992924_136992975_136993052_136993244_136993342_136993412_136993579_136993665_136993765
transcript_200822.known	chr9	-	1622	10	FSM	ENSG00000107331.18	ENST00000494046.5	1622	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	8.32369813347913	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGGGGTCGCTTTTCCTT	-137027679	True	NA	NA	False	NA	NA	NA	137028184	137020182	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_137020496_137020693_137021062_137021391_137021611_137021890_137022002_137022350_137022479_137022701_137022866_137022940_137023053_137023837_137023841_137024142_137024237_137028074
transcript_200824.known	chr9	-	1475	9	FSM	ENSG00000107281.10	ENST00000371601.5	1475	9	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_8	35.6841614025046	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGCCTGTGTTGCCAGC	-137042484	True	NA	-11	True	ATTAAA	-20	NA	137046177	137039462	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_137039865_137039970_137040068_137040356_137040437_137040513_137040599_137040670_137040738_137040813_137040985_137041061_137041188_137042926_137043074_137045877
transcript_200839.nnic	chr9	-	3733	8	NNC	ENSG00000186193.9	novel	3814	6	NA	NA	-44	-172	intron_retention	FALSE	canonical	1	1	junction_1	104.696451414437	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAGATCCAGGTTTAAAA	-137066706	True	NA	NA	False	AAAAAG	-13	NA	137070601	137062298	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_137063495_137063537_137064788_137064862_137064980_137065077_137065186_137065521_137065669_137066261_137066375_137069703_137069794_137069889
transcript_200845.nnic	chr9	-	3812	7	NNC	ENSG00000186193.9	novel	3814	6	NA	NA	-41	0	intron_retention	TRUE	canonical	1	1	junction_1	81.4902857196284	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGAGTGGTATTTATAGT	-137066703	True	NA	NA	False	AATAAA	-22	NA	137070598	137062126	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_137063495_137063537_137064788_137064862_137064980_137065077_137065186_137065521_137065669_137066261_137066375_137069889
transcript_20085.known	chr1	-	3987	7	FSM	ENSG00000143751.10	ENST00000272091.8	3987	7	0	0	0	0	multi-exon	TRUE	canonical	3	100	junction_1	15.6808446484521	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCATTTCTAATATTCT	-225994934	True	NA	-6	True	AATAAA	-23	NA	225999343	225982701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_225985524_225987895_225988389_225991242_225991364_225992397_225992568_225992890_225993003_225995265_225995384_225999192
transcript_200854.nnic	chr9	-	3640	7	NNC	ENSG00000186193.9	novel	3814	6	NA	NA	-41	-172	intron_retention	FALSE	canonical	1	1	junction_1	81.4902857196284	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAGATCCAGGTTTAAAA	-137066703	True	NA	NA	False	AAAAAG	-13	NA	137070598	137062298	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_137063495_137063537_137064788_137064862_137064980_137065077_137065186_137065521_137065669_137066261_137066375_137069889
transcript_200861.known	chr9	-	3814	6	FSM	ENSG00000186193.9	ENST00000409687.5	3814	6	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_5	29.4726992316618	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGAGTGGTATTTATAGT	-137066662	True	NA	NA	False	AATAAA	-22	NA	137070557	137062126	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_137064788_137064862_137064980_137065077_137065186_137065521_137065669_137066261_137066375_137069889
transcript_200875.known	chr9	+	3349	9	FSM	ENSG00000197355.11	ENST00000409858.8	3349	9	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	14.396180048888	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTACTCTGGCAAGTGCA	137076502	True	NA	28	True	AATAAA	-20	NA	137077516	137084538	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137077822_137078049_137078255_137078501_137078678_137078975_137079149_137079255_137079450_137080001_137080143_137080688_137080875_137081997_137082065_137082636
transcript_200877.nnic	chr9	+	3319	9	NNC	ENSG00000197355.11	novel	3349	9	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	24.7130405858931	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTACTCTGGCAAGTGCA	137076564	False	NA	28	True	AATAAA	-20	NA	137077578	137084538	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_137077822_137078049_137078287_137078501_137078678_137078975_137079149_137079255_137079450_137080001_137080143_137080688_137080875_137081997_137082065_137082636
transcript_20088.known	chr1	+	799	5	FSM	ENSG00000163041.13	ENST00000366816.5	799	5	0	0	0	0	multi-exon	TRUE	canonical	2	82	junction_1	2222.70842667229	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATTTCTCTTCTTCCTG	226061753	True	NA	NA	False	NA	NA	NA	226061850	226071523	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_226062095_226062734_226062812_226064328_226064480_226065655_226065810_226071350
transcript_200885.known	chr9	+	2891	14	FSM	ENSG00000177239.16	ENST00000684138.1	2891	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	107.030438627988	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCTTTTCGGTGGAGATA	137086815	False	NA	-30	True	NA	NA	NA	137086893	137109145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137087219_137088074_137088184_137088267_137088399_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107249_137107448_137107530_137107663_137108387
transcript_200886.known	chr9	+	2816	14	FSM	ENSG00000177239.16	ENST00000371587.9	2816	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	123.441335514525	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGAATGGGTCTTTTCGG	137086857	False	NA	-38	True	GGGGCT	-44	NA	137086935	137109137	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137087219_137088074_137088184_137088267_137088399_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107274_137107448_137107530_137107663_137108387
transcript_200893.known	chr9	+	2692	13	FSM	ENSG00000177239.16	ENST00000683355.1	2692	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	84.4137873809723	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATGTCCCCAATCCAAG	137082179	True	NA	NA	False	NA	NA	NA	137086962	137108970	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137087219_137088074_137088184_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107249_137107448_137107530_137107663_137108211
transcript_200894.known	chr9	+	2700	13	FSM	ENSG00000177239.16	ENST00000684759.1	2700	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	85.6470064988977	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCGATGTCGCCTGTGTCT	137082201	True	NA	8	True	GATAAA	-17	NA	137086984	137109183	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137087219_137088074_137088184_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107249_137107448_137107537_137107663_137108387
transcript_200895.known	chr9	+	2690	13	FSM	ENSG00000177239.16	ENST00000682117.1	2690	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	84.4137873809723	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGATGTCGCCTGTGTCTTT	137082181	True	NA	10	True	GATAAA	-19	NA	137086964	137109185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137087219_137088074_137088184_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107249_137107448_137107530_137107663_137108426
transcript_200896.known	chr9	+	2698	13	FSM	ENSG00000177239.16	ENST00000682881.1	2698	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	84.1470274116812	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGCCTGTGTCTTTAGGG	137086846	False	NA	14	True	GATAAA	-23	NA	137086856	137109189	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137087219_137088074_137088184_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107249_137107448_137107530_137107663_137108530
transcript_200899.known	chr9	+	2755	13	FSM	ENSG00000177239.16	ENST00000683135.1	2755	13	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_10	82.8413393179999	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTAACCGCGATGTCGC	137086825	False	NA	0	True	GATAAA	-9	NA	137086903	137109175	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137087219_137088074_137088184_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107274_137107448_137107530_137107663_137108387
transcript_200901.known	chr9	+	2852	13	FSM	ENSG00000177239.16	ENST00000684272.1	2852	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	86.837451917681	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCGATGTCGCCTGTGTCT	137082201	True	NA	8	True	GATAAA	-17	NA	137086984	137109183	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137087364_137088074_137088184_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107249_137107448_137107530_137107663_137108387
transcript_200903.known	chr9	+	3432	12	FSM	ENSG00000177239.16	ENST00000535144.6	3432	12	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_9	23.0289074537286	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCGATGTCGCCTGTGTCT	137082201	True	NA	8	True	GATAAA	-17	NA	137086984	137109183	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137087219_137088074_137088184_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107249_137107448_137107530
transcript_200905.known	chr9	+	2792	12	FSM	ENSG00000177239.16	ENST00000684229.1	2792	12	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_9	25.874777916562	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGATAAAAGTTGATTTG	137082173	True	NA	-18	True	NA	NA	NA	137086956	137109157	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137087219_137088074_137088184_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107249_137107663_137108387
transcript_200908.known	chr9	+	2526	12	FSM	ENSG00000177239.16	ENST00000684366.1	2526	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	89.5407013043937	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGATAAAAGTTGATTTGCT	137086872	False	NA	-16	True	NA	NA	NA	137086950	137109159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137087219_137088074_137088184_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106688_137106810_137107249_137107448_137107530_137107663_137108387
transcript_200917.known	chr9	-	1601	13	FSM	ENSG00000176978.14	ENST00000371579.7	1601	13	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_5	29.1836855109152	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTATGTCCCGTCCTTCC	-137113733	True	NA	-6	True	AATAAA	-17	NA	137114733	137110545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_137110784_137110879_137110951_137111689_137111755_137111872_137112030_137112111_137112231_137112744_137112806_137112952_137113120_137113205_137113288_137113360_137113497_137113864_137114029_137114242_137114383_137114462_137114577_137114646
transcript_20092.known	chr1	+	559	4	FSM	ENSG00000163041.13	ENST00000667897.1	559	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	2401.73664020202	1110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTGGTAGTTCTGAACG	225971739	False	NA	NA	False	NA	NA	NA	226062757	226071542	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_226062812_226064328_226064480_226065655_226065818_226071350
transcript_200925.nic	chr9	-	2137	12	NIC	ENSG00000176978.14	novel	1601	13	NA	NA	-22	0	intron_retention	FALSE	canonical	3	129	junction_11	25.5569369211842	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTATGTCCCGTCCTTCC	-137113755	True	NA	-6	True	AATAAA	-17	NA	137114755	137110545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_137110784_137110879_137110951_137111689_137111755_137111872_137112030_137112111_137112806_137112952_137113120_137113205_137113288_137113360_137113497_137113864_137114029_137114242_137114383_137114462_137114577_137114646
transcript_200932.nic	chr9	-	1990	11	NIC	ENSG00000176978.14	novel	1601	13	NA	NA	-11	0	intron_retention	FALSE	canonical	3	13	junction_7	53.7606733588782	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTATGTCCCGTCCTTCC	-137113744	True	NA	-6	True	AATAAA	-17	NA	137114744	137110545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_137110784_137110879_137110951_137111689_137111755_137111872_137112030_137112111_137112806_137112952_137113120_137113205_137113288_137113864_137114029_137114242_137114383_137114462_137114577_137114646
transcript_200947.known	chr9	-	1209	2	FSM	ENSG00000184709.7	ENST00000371542.3	1209	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGTGACATTCCTTTAGG	NA	False	NA	0	True	NA	NA	NA	137170051	137168757	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_137169186_137169270
transcript_200964.known	chr9	-	2655	13	FSM	ENSG00000176248.9	ENST00000323927.3	2655	13	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_11	12.6301557129488	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTGTCCTGGTGGCTT	-137184227	True	NA	-1	True	ATTAAA	-16	NA	137188560	137174783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_137175155_137175236_137175473_137175707_137175838_137180180_137180385_137180451_137180528_137180787_137180930_137181680_137181863_137183124_137183243_137183671_137183792_137184912_137185088_137186223_137186357_137187480_137188104_137188415
transcript_200973.nic	chr9	-	3810	12	NIC	ENSG00000176248.9	novel	2655	13	NA	NA	-31	0	intron_retention	FALSE	canonical	3	69	junction_10	10.8665838527156	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTGTCCTGGTGGCTT	-137184258	True	NA	-1	True	ATTAAA	-16	NA	137188591	137174783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_137175155_137175236_137175473_137175707_137175838_137180180_137180385_137180451_137180528_137180787_137180930_137181680_137181863_137183124_137183243_137183671_137183792_137184912_137185088_137186223_137188104_137188415
transcript_200977.nic	chr9	-	2766	12	NIC	ENSG00000176248.9	novel	2655	13	NA	NA	-31	-2	intron_retention	FALSE	canonical	3	60	junction_10	12.7907507905175	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTTCTGTCCTGGTGGC	-137184258	True	NA	-3	True	ATTAAA	-14	NA	137188591	137174785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_137175473_137175707_137175838_137180180_137180385_137180451_137180528_137180787_137180930_137181680_137181863_137183124_137183243_137183671_137183792_137184912_137185088_137186223_137186357_137187480_137188104_137188415
transcript_20098.known	chr1	+	607	4	FSM	ENSG00000163041.13	ENST00000666609.1	607	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	2557.96677069895	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAATTTCTCTTCTTCC	226062674	True	NA	NA	False	NA	NA	NA	226063465	226071521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_226063597_226064328_226064480_226065655_226065810_226071350
transcript_200988.known	chr9	+	723	3	FSM	ENSG00000176101.12	ENST00000464553.2	723	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	380	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCCAGCCTGCTGCTTGC	137177370	True	NA	13	True	AATAAA	-20	NA	137188705	137190370	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137188779_137189065_137189152_137189806
transcript_200989.known	chr9	+	863	3	FSM	ENSG00000176101.12	ENST00000322310.10	863	3	0	0	0	0	multi-exon	FALSE	canonical	3	814	junction_1	104	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCGTGCCAGCCTGCTGC	137177340	True	NA	9	True	AATAAA	-16	NA	137188675	137190366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137188779_137189065_137189266_137189806
transcript_200991.known	chr9	+	1170	2	FSM	ENSG00000176101.12	ENST00000459860.1	1170	2	0	0	0	0	multi-exon	FALSE	canonical	3	1022	junction_1	0	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCCAGCCTGCTGCTTGC	137177324	True	NA	13	True	AATAAA	-20	NA	137188659	137190370	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137189266_137189806
transcript_200992.known	chr9	+	570	2	FSM	ENSG00000176101.12	ENST00000463511.1	570	2	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCAGGGCCTGCCTCCGTG	137177363	True	NA	NA	False	NA	NA	NA	137188698	137189923	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137189152_137189806
transcript_200995.nnic	chr9	-	2300	5	NNC	ENSG00000176058.13	novel	2659	4	NA	NA	-57	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	67.5925291729789	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGTGTCCCCACTGCG	-137196341	False	4457	-13	True	AATAAA	-16	NA	137200798	137191618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_137192175_137192258_137192366_137192450_137192692_137198986_137200201_137200616
transcript_200997.nic	chr9	-	2470	4	Fusion	ENSG00000187713.7_ENSG00000176058.13	novel	2659	4	NA	NA	-21	0	multi-exon	FALSE	canonical	2	8	junction_3	73.0722625594388	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGTGTCCCCACTGCG	-137201212	True	NA	-13	True	AATAAA	-16	NA	137205669	137191618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr9_-_137192175_137192258_137192366_137192450_137192692_137204103
transcript_200998.known	chr9	-	1567	1	FSM	ENSG00000187713.7	ENST00000343666.6	1567	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	481	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATAGTGGTTGCCTGTAA	-137201191	True	NA	NA	False	AATAAA	-23	NA	137205648	137204081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_137204100_137205600
transcript_200999.known	chr9	-	2659	4	FSM	ENSG00000176058.13	ENST00000409012.6	2659	4	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_3	12.7540843131393	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGTGTCCCCACTGCG	-137196284	False	4457	-13	True	AATAAA	-16	NA	137200741	137191618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_137192175_137192258_137192366_137192450_137192692_137198986
transcript_201001.known	chr9	+	2497	14	FSM	ENSG00000188566.15	ENST00000371521.8	2497	14	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_12	33.6996830705165	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTAGCGCAGGCTTCCTT	137200384	True	NA	31	True	AGTAAA	-21	NA	137205694	137217009	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137205913_137206231_137206310_137212501_137212600_137213779_137213879_137213966_137214069_137214203_137214414_137214569_137214692_137214797_137215019_137215094_137215203_137215406_137215522_137215658_137215806_137215898_137216018_137216066_137216189_137216271
transcript_201003.known	chr9	+	4817	14	FSM	ENSG00000188566.15	ENST00000684003.1	4817	14	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_9	14.6767940649063	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATTGTTACTACTTGTC	137200389	True	NA	6	True	AATAAA	-15	NA	137205699	137219361	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137205913_137206231_137206310_137212501_137212600_137213779_137213879_137213966_137214069_137214203_137214414_137214569_137214692_137214797_137215019_137215094_137215203_137215406_137215522_137215658_137215806_137215898_137216018_137216093_137216189_137216271
transcript_201006.known	chr9	+	1829	14	FSM	ENSG00000188566.15	ENST00000458322.2	1829	14	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	34.6140170670033	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCATCCTCCTGGGAGCC	137200439	True	NA	NA	False	NA	NA	NA	137205749	137216444	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137205913_137206231_137206310_137212501_137212600_137213779_137213879_137213966_137214069_137214203_137214414_137214569_137214692_137214797_137215019_137215094_137215203_137215427_137215522_137215658_137215806_137215898_137216018_137216093_137216189_137216271
transcript_201010.nic	chr9	+	2569	13	ISM	ENSG00000188566.15	ENST00000684003.1	4817	14	-24	2355	-9	-3	intron_retention	FALSE	canonical	3	102	junction_9	14.0146252972465	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTCTAGCGCAGGCTTC	137200365	True	NA	28	True	AGTAAA	-18	NA	137205675	137217006	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_137205913_137206231_137206310_137212501_137212600_137213779_137213879_137213966_137214069_137214203_137214414_137214569_137214692_137214797_137215019_137215094_137215203_137215406_137215522_137215658_137215806_137215898_137216018_137216093
transcript_201011.nic	chr9	+	4922	13	ISM	ENSG00000188566.15	ENST00000684003.1	4817	14	-24	2	-9	-2	intron_retention	FALSE	canonical	3	102	junction_9	14.0146252972465	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCCATTGTTACTACTTG	137200365	True	NA	4	True	AATAAA	-13	NA	137205675	137219359	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_137205913_137206231_137206310_137212501_137212600_137213779_137213879_137213966_137214069_137214203_137214414_137214569_137214692_137214797_137215019_137215094_137215203_137215406_137215522_137215658_137215806_137215898_137216018_137216093
transcript_20102.known	chr1	-	3584	8	FSM	ENSG00000182827.9	ENST00000366812.6	3584	8	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_5	31.9195417081314	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTGATGTTTCATTAAT	-226179315	True	NA	0	True	ATTAAA	-15	NA	226186741	226144678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_226146822_226152334_226152620_226154646_226154834_226159183_226159359_226161530_226161690_226164788_226164930_226165858_226166001_226186389
transcript_201036.known	chr9	+	1910	1	FSM	ENSG00000284976.1	ENST00000645271.1	1910	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATTGTTACTACTTGTC	137217397	False	NA	6	True	AATAAA	-15	NA	137217451	137219361	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137217500_137219400
transcript_201037.known	chr9	-	1077	1	NIC	ENSG00000212864.4	novel	1135	2	NA	NA	258	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGACTGAAGCTTGCTC	-137221298	False	NA	-10	True	ATTAAA	-26	NA	137221323	137220246	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_137220200_137221300
transcript_201038.known	chr9	+	762	2	FSM	ENSG00000197191.6	ENST00000650725.2	762	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCTTTGCTGCAGGCTC	137224947	True	NA	12	True	AATAAA	-25	NA	137225173	137226315	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137225234_137225613
transcript_201039.known	chr9	+	1563	4	FSM	ENSG00000188229.6	ENST00000340384.5	1563	4	0	0	0	0	multi-exon	FALSE	canonical	3	1069	junction_1	88.3037686373325	2535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTTTCGCTTTGCCCAT	137223252	True	NA	21	True	ATTAAA	-15	NA	137241286	137243707	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137241418_137241720_137241830_137241910_137242022_137242495
transcript_201041.known	chr9	+	2035	3	FSM	ENSG00000188229.6	ENST00000604929.1	2035	3	0	0	0	0	multi-exon	FALSE	canonical	3	1069	junction_1	64	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTTTCGCTTTGCCCA	137223253	True	NA	20	True	ATTAAA	-14	NA	137241287	137243706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137241418_137241720_137241830_137241910
transcript_201058.known	chr9	+	2540	13	FSM	ENSG00000188986.9	ENST00000343053.6	2540	13	0	0	0	0	multi-exon	FALSE	canonical	3	739	junction_8	60.8725900732195	1124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGAGGCTGAGATGTCTC	137251217	True	NA	15	True	AATAAA	-16	NA	137255326	137273542	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137255612_137255906_137256071_137256328_137256429_137256823_137257055_137263036_137263223_137264244_137264358_137265876_137265980_137266330_137266427_137266943_137267087_137267239_137267347_137272080_137272223_137272506_137272616_137272781
transcript_20106.nic	chr1	-	717	4	ISM	ENSG00000182827.9	ENST00000366812.6	3584	8	-21	16950	-21	-6987	5prime_fragment	FALSE	canonical	3	290	junction_1	42.9495828462474	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGAAACGTAGGAGAGA	-226179336	True	NA	-19	True	AAGAAA	-21	NA	226186762	226161628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_226161690_226164788_226164930_226165858_226166001_226186389
transcript_20107.nic	chr1	-	655	3	ISM	ENSG00000182827.9	ENST00000366812.6	3584	8	-21	20111	-21	-10148	5prime_fragment	FALSE	canonical	3	315	junction_2	38	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAAGTTTGAGGGCATGG	-226179336	True	NA	-1	True	AATAGA	-24	NA	226186762	226164789	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_226164930_226165858_226166001_226186389
transcript_20109.known	chr1	+	1965	2	FSM	ENSG00000185155.12	ENST00000366810.6	1965	2	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAATTTCTATTTAAATGA	226222622	True	NA	16	True	ATTAAA	-22	NA	226223663	226227060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_226224075_226225506
transcript_201092.known	chr9	+	4171	2	FSM	ENSG00000198113.3	ENST00000357503.3	4171	2	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACCTACTGTTTGGTTTGT	137276845	True	NA	14	True	AATAAA	-20	NA	137277725	137282641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137277908_137278652
transcript_201093.known	chr9	-	2641	1	FSM	ENSG00000198435.4	ENST00000356628.4	2641	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGGCTTTGGCACAAG	-137298976	True	NA	0	True	AATAAA	-43	NA	137302271	137299630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_137299600_137302300
transcript_201096.known	chr9	-	2781	22	FSM	ENSG00000187609.16	ENST00000340951.9	2781	22	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	34.5708382476164	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGCTCACATGTTTCAT	-137421612	True	NA	-1	True	AATAAA	-37	NA	137423162	137306895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_137307264_137307607_137307647_137309606_137309701_137323724_137323857_137324089_137324144_137348070_137348239_137349109_137349283_137349368_137349532_137351037_137351148_137351317_137351529_137352065_137352202_137352619_137352787_137354338_137354378_137354699_137354774_137356267_137356369_137366492_137366633_137367935_137367990_137372904_137373073_137373425_137373600_137383312_137383378_137395302_137395405_137423113
transcript_201105.nnic	chr9	-	2299	8	NNC	ENSG00000187609.16	novel	1432	11	NA	NA	-62	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	28.8910691659381	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGTGACGTCTGTC	-137421723	True	NA	-5	True	AATAAA	-14	NA	137423273	137366144	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_-_137366362_137366492_137366609_137366692_137367990_137372904_137373073_137373425_137373600_137383312_137383378_137395302_137395405_137423113
transcript_201108.known	chr9	-	962	8	FSM	ENSG00000187609.16	ENST00000479452.5	962	8	0	0	0	0	multi-exon	FALSE	canonical	2	64	junction_1	12.4638252063927	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGTGACGTCTGTC	-137421605	True	NA	-5	True	AATAAA	-14	NA	137423155	137366144	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_137366362_137366492_137366633_137367935_137367990_137372904_137373073_137373425_137373600_137383312_137383378_137395302_137395405_137423113
transcript_201112.nic	chr9	-	2514	6	NIC	ENSG00000187609.16	novel	1432	11	NA	NA	-62	0	intron_retention	FALSE	canonical	2	65	junction_4	12.9089116504839	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGTGACGTCTGTC	-137421723	True	NA	-5	True	AATAAA	-14	NA	137423273	137366144	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_137367990_137372904_137373073_137373425_137373600_137383312_137383378_137395302_137395405_137423113
transcript_201114.known	chr9	-	1585	3	FSM	ENSG00000187609.16	ENST00000465160.2	1585	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	40.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGCGCAGTTGAGGTCAG	-137421612	True	NA	-2	True	AATAAA	-21	NA	137423162	137391801	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_137393236_137395302_137395405_137423113
transcript_201118.known	chr9	+	1614	14	FSM	ENSG00000188747.9	ENST00000683555.1	1614	14	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_3	5.70891548162445	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCACCCTCCAAGTGGGT	137423131	True	NA	7	True	AATAAA	-17	NA	137423392	137434406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137423707_137426247_137426331_137428032_137428142_137428881_137429017_137429275_137429384_137430783_137430844_137431074_137431101_137431235_137431342_137433028_137433075_137433204_137433264_137433452_137433608_137433749_137433865_137433964_137434080_137434223
transcript_20112.known	chr1	-	2998	15	FSM	ENSG00000183814.16	ENST00000681046.1	2998	15	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_4	21.2559715499107	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTCTATATTTTCATT	-226307503	True	NA	0	True	AATAAA	-18	NA	226309164	226231156	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_226232607_226233095_226233194_226233343_226233524_226238970_226239097_226250838_226250920_226265532_226265635_226266212_226266333_226267956_226268091_226277774_226277933_226286332_226286459_226287663_226287798_226295841_226295947_226297718_226297814_226301172_226301206_226309108
transcript_201125.known	chr9	-	2130	10	FSM	ENSG00000188833.10	ENST00000371506.7	2130	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2.05480466765633	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTAGGGCTGATCTCCCT	-137441337	False	NA	1	True	ATTAAA	-19	NA	137441357	137434363	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_137435106_137435203_137435339_137435718_137435830_137436012_137436277_137436520_137436752_137436868_137437029_137437158_137437310_137437966_137438085_137438159_137438306_137441285
transcript_201135.known	chr9	-	2981	15	FSM	ENSG00000165802.23	ENST00000265663.12	2981	15	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_10	71.2512441710204	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCGCGGCCGCCGCGTGGG	-137452317	True	NA	-31	True	ATTAAA	-11	NA	137459334	137448231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_137449492_137449598_137449675_137449922_137450026_137450175_137450256_137452364_137452436_137452552_137452587_137452735_137452820_137453055_137453181_137453730_137453821_137454390_137454444_137455238_137455308_137456410_137456487_137457406_137457902_137458487_137458550_137459031
transcript_201137.known	chr9	-	3556	15	FSM	ENSG00000165802.23	ENST00000371473.7	3556	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	230.301809522608	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCCTGTAGACTCTGTG	-137452317	True	NA	-12	True	TATAAA	-17	NA	137459334	137447572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_137449492_137449598_137449675_137449922_137450026_137450175_137450256_137452364_137452436_137452552_137452587_137452735_137452820_137453055_137453181_137454390_137454444_137455238_137455308_137455628_137455635_137456410_137456487_137457406_137457902_137458487_137458550_137459031
transcript_201142.known	chr9	-	3571	14	FSM	ENSG00000165802.23	ENST00000371474.7	3571	14	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_10	128.908664514773	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCCTGTAGACTCTGTG	-137452317	True	NA	-12	True	TATAAA	-17	NA	137459334	137447572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_137449492_137449598_137449675_137449922_137450026_137450175_137450256_137452364_137452436_137452552_137452587_137452735_137452820_137453055_137453181_137453730_137453821_137454390_137454444_137456410_137456487_137457406_137457902_137458487_137458550_137459031
transcript_20115.known	chr1	-	2909	14	FSM	ENSG00000183814.16	ENST00000460719.5	2909	14	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_11	33.0606399992463	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTTCATTTAATTCAA	-226307511	True	NA	8	True	AATAAA	-26	NA	226309172	226231148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_226232607_226233095_226233194_226233343_226233524_226238970_226239097_226250838_226250920_226265532_226265635_226266212_226266333_226267956_226268091_226277774_226277933_226286332_226286459_226287663_226287798_226297718_226297814_226301172_226301206_226309108
transcript_201155.known	chr9	-	3649	16	FSM	ENSG00000165802.23	ENST00000371475.9	3649	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_11	192.705947552799	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTAGACTCTGTGTTA	-137452317	True	NA	-9	True	TATAAA	-20	NA	137459334	137447569	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_137449492_137449598_137449675_137449922_137450026_137450175_137450256_137452364_137452436_137452552_137452587_137452735_137452820_137453055_137453181_137453730_137453821_137454390_137454444_137455238_137455308_137455628_137455635_137456410_137456487_137457406_137457902_137458487_137458550_137459031
transcript_201156.known	chr9	+	582	2	FSM	ENSG00000182154.8	ENST00000371443.6	582	2	0	0	0	0	multi-exon	FALSE	canonical	3	2190	junction_1	0	1466	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGGTGTTTGTTTTTTGGC	137525080	True	NA	18	True	ATTAAA	-16	NA	137551878	137552555	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137551979_137552073
transcript_201161.nic	chr9	-	2134	11	NIC	ENSG00000148399.13	novel	1414	9	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_7	80.3766757212564	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGAGTTTATAACATGTTT	-137575471	False	NA	-9	True	ATTAAA	-18	NA	137578936	137554903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_137555649_137564433_137564607_137564892_137564959_137565084_137565155_137574207_137574381_137574751_137574847_137575708_137575893_137576079_137576168_137576308_137576403_137577469_137577604_137578624
transcript_201169.nic	chr9	-	1947	10	NIC	ENSG00000148399.13	novel	2302	9	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_8	51.9572473823966	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGAGTTTATAACATGTTT	-137575471	False	NA	-9	True	ATTAAA	-18	NA	137578936	137554903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_137555649_137564433_137564607_137564892_137564959_137565084_137565155_137574207_137574381_137574751_137574844_137576079_137576168_137576308_137576403_137577469_137577604_137578624
transcript_201176.nic	chr9	-	2321	10	NIC	ENSG00000148399.13	novel	1414	9	NA	NA	-11	0	intron_retention	FALSE	canonical	3	33	junction_6	68.2952920308585	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGAGTTTATAACATGTTT	-137575471	False	NA	-9	True	ATTAAA	-18	NA	137578936	137554903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_137555649_137564433_137564607_137564892_137564959_137565084_137565155_137574207_137574381_137574751_137574847_137575708_137576168_137576308_137576403_137577469_137577604_137578624
transcript_201189.nic	chr9	-	1808	9	NIC	ENSG00000148399.13	novel	2302	9	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_8	66.1962045739784	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGAGTTTATAACATGTTT	-137575466	True	NA	-9	True	ATTAAA	-18	NA	137578931	137554903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_137555649_137564433_137564607_137564892_137564959_137565084_137565155_137574207_137574381_137574751_137574844_137576079_137576168_137576308_137576403_137578624
transcript_201191.known	chr9	-	2302	9	FSM	ENSG00000148399.13	ENST00000277540.7	2302	9	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_7	41.6863286941894	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAGGACAACCAGTTACAG	-137575460	True	NA	NA	False	AATAAA	-19	NA	137578925	137554443	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_137555649_137564433_137564607_137564892_137564959_137565084_137565155_137574207_137574381_137574751_137574844_137576079_137576168_137577469_137577604_137578624
transcript_20121.known	chr1	-	3567	15	FSM	ENSG00000183814.16	ENST00000328205.9	3567	15	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_4	21.2559715499107	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTCTATATTTTCATT	-226309626	True	NA	0	True	AATAAA	-18	NA	226309733	226231156	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_226232607_226233095_226233194_226233343_226233524_226238970_226239097_226250838_226250920_226265532_226265635_226266212_226266333_226267956_226268091_226277774_226277933_226286332_226286459_226287663_226287798_226295841_226295947_226297718_226297814_226301172_226301206_226309108
transcript_201219.nic	chr9	-	1714	8	NIC	ENSG00000148399.13	novel	2302	9	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_7	65.9792793695297	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGAGTTTATAACATGTTT	-137575466	True	NA	-9	True	ATTAAA	-18	NA	137578931	137554903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_137555649_137564433_137564607_137564892_137564959_137565084_137565155_137574207_137574381_137574751_137574844_137576079_137576168_137578624
transcript_201232.nic	chr9	-	1787	8	NIC	ENSG00000148399.13	novel	2302	9	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_2	61.02659172819	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGAGTTTATAACATGTTT	-137575471	False	NA	-9	True	ATTAAA	-18	NA	137578936	137554903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_-_137555649_137564433_137564607_137565084_137565155_137574207_137574381_137574751_137574844_137576079_137576168_137577469_137577604_137578624
transcript_201280.known	chr9	-	1395	6	FSM	ENSG00000165724.6	ENST00000298585.3	1395	6	0	0	0	0	multi-exon	FALSE	canonical	3	583	junction_5	47.4510273861378	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCCTCTCGGACATTCT	-137585267	True	NA	-21	True	AGTAAA	-13	NA	137590512	137582080	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_137582687_137582982_137583164_137586966_137587108_137587716_137587824_137588658_137588719_137590212
transcript_201287.nnic	chr9	+	1520	8	NNC	ENSG00000197070.14	novel	1556	8	NA	NA	-68	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_4	96.4468765694359	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCCTCACCGGCCTCG	NA	False	NA	12	True	AATAAA	-17	NA	137605616	137615360	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_137605836_137612895_137613007_137613459_137613511_137613614_137613665_137614031_137614215_137614298_137614476_137614558_137615001_137615073
transcript_20129.known	chr1	-	3978	23	FSM	ENSG00000143799.14	ENST00000366794.10	3978	23	0	0	0	0	multi-exon	FALSE	canonical	3	2138	junction_17	237.872804402647	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTATTGCGTGTCTGG	-226350354	True	NA	-7	True	ATTAAA	-20	NA	226408093	226360690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_226361542_226361968_226362084_226363098_226363161_226363942_226364071_226365001_226365155_226365953_226366053_226367479_226367609_226368198_226368322_226370433_226370518_226374225_226374355_226377107_226377304_226379141_226379275_226379572_226379642_226379921_226380165_226381067_226381209_226383035_226383184_226385503_226385681_226386325_226386443_226388655_226388756_226390409_226390625_226392198_226392315_226402213_226402380_226407809
transcript_201292.known	chr9	+	1556	8	FSM	ENSG00000197070.14	ENST00000371421.9	1556	8	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_4	36.8776244309943	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCCTCACCGGCCTCG	137601030	True	NA	12	True	AATAAA	-17	NA	137605685	137615360	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137605836_137612895_137613007_137613459_137613511_137613614_137613770_137614031_137614215_137614298_137614476_137614558_137615001_137615073
transcript_201298.nic	chr9	+	1697	7	ISM	ENSG00000197070.14	ENST00000371421.9	1556	8	-69	1	-68	0	intron_retention	FALSE	canonical	3	226	junction_4	39.8315899200064	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGCCTCACCGGCCTC	NA	False	NA	11	True	AATAAA	-16	NA	137605616	137615359	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_137605836_137612895_137613007_137613459_137613511_137613614_137613770_137614031_137614215_137614298_137614476_137614558
transcript_201300.known	chr9	+	829	7	FSM	ENSG00000197070.14	ENST00000419386.1	829	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	107.970675031078	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTCCGCACCACCCCAG	137601047	True	NA	NA	False	GGGGCT	-27	NA	137605702	137614685	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137605836_137612895_137613007_137613459_137613511_137613614_137613770_137614139_137614215_137614298_137614476_137614558
transcript_201302.nic	chr9	+	2078	7	NIC	ENSG00000197070.14	novel	1556	8	NA	NA	-68	0	intron_retention	FALSE	canonical	3	226	junction_3	37.1528374869717	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCCTCACCGGCCTCG	NA	False	NA	12	True	AATAAA	-17	NA	137605616	137615360	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_137605836_137612895_137613511_137613614_137613770_137614031_137614215_137614298_137614476_137614558_137615001_137615073
transcript_201306.nic	chr9	+	2150	6	NIC	ENSG00000197070.14	novel	1556	8	NA	NA	-68	0	intron_retention	FALSE	canonical	3	226	junction_3	40.5926101649056	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGCCTCACCGGCCTC	NA	False	NA	11	True	AATAAA	-16	NA	137605616	137615359	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_137605836_137612895_137613511_137613614_137613770_137614031_137614215_137614298_137614476_137614558
transcript_201309.nic	chr9	+	2412	5	NIC	ENSG00000197070.14	novel	829	7	NA	NA	-68	0	intron_retention	FALSE	canonical	3	263	junction_3	34.7589916424513	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGCCTCACCGGCCTC	NA	False	NA	11	True	AATAAA	-16	NA	137605616	137615359	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_137605836_137612895_137613511_137613614_137614215_137614298_137614476_137614558
transcript_201318.known	chr9	-	1409	3	FSM	ENSG00000203993.7	ENST00000371417.4	1480	3	65	6	18	0	multi-exon	FALSE	canonical	2	116	junction_2	46.5	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCTCCAGGTCCCAG	-137617133	True	NA	0	True	AATAAA	-18	NA	137618813	137615331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_137616200_137617933_137618192_137618530
transcript_201320.known	chr9	-	2210	2	FSM	ENSG00000203993.7	ENST00000623970.1	2210	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAGCTCTACAAATAAAGT	-137617151	True	NA	-35	True	NA	NA	NA	137618831	137615366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_137616133_137617387
transcript_201321.known	chr9	-	1825	2	FSM	ENSG00000203993.7	ENST00000496793.3	1841	2	0	16	0	-16	multi-exon	FALSE	canonical	3	209	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTATTTACAGGAGTTG	-137618887	False	NA	-16	True	AATAAA	-2	NA	137618906	137615347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_-_137616200_137617933
transcript_201322.known	chr9	+	5095	27	FSM	ENSG00000181090.21	ENST00000460843.6	5095	27	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_4	94.5415049269164	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGTTTTTATTATGACAC	137604826	True	NA	15	True	AATAAA	-20	NA	137619004	137836127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137619050_137710966_137711031_137716625_137717183_137728348_137728530_137743370_137743529_137743901_137744091_137752330_137752409_137754170_137754292_137757879_137758012_137762674_137762821_137775108_137775253_137776617_137776845_137777881_137778056_137779634_137779718_137782290_137782398_137790847_137790971_137798812_137798915_137800879_137800985_137811460_137811616_137813005_137813174_137813385_137813531_137814430_137814509_137815946_137816063_137817438_137817526_137818059_137818139_137834348_137834525_137834772
transcript_201325.nic	chr9	+	4697	27	NIC	ENSG00000181090.21	novel	5095	27	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	254	junction_4	89.2987887299657	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTGCTGATTCTGGTGTGG	137604817	True	NA	7	True	AATAAA	-18	NA	137618995	137835741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_137619050_137710966_137711031_137716625_137717183_137728348_137728530_137743391_137743529_137743901_137744091_137752330_137752409_137754170_137754292_137757879_137758012_137762674_137762821_137775108_137775253_137776617_137776845_137777881_137778056_137779634_137779718_137782290_137782398_137790847_137790971_137798812_137798915_137800879_137800985_137811460_137811616_137813005_137813174_137813385_137813531_137814430_137814509_137815946_137816063_137817438_137817526_137818059_137818139_137834348_137834525_137834772
transcript_201326.nic	chr9	+	5143	27	NIC	ENSG00000181090.21	novel	5095	27	NA	NA	-56	0	combination_of_known_junctions	FALSE	canonical	3	254	junction_4	89.2987887299657	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGTTTTTATTATGACAC	137604757	True	NA	15	True	AATAAA	-20	NA	137618935	137836127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_137619050_137710966_137711031_137716625_137717183_137728348_137728530_137743391_137743529_137743901_137744091_137752330_137752409_137754170_137754292_137757879_137758012_137762674_137762821_137775108_137775253_137776617_137776845_137777881_137778056_137779634_137779718_137782290_137782398_137790847_137790971_137798812_137798915_137800879_137800985_137811460_137811616_137813005_137813174_137813385_137813531_137814430_137814509_137815946_137816063_137817438_137817526_137818059_137818139_137834348_137834525_137834772
transcript_201333.nic	chr9	+	5020	26	NIC	ENSG00000181090.21	novel	5095	27	NA	NA	-56	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_10	131.83563099557	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGTTTTTATTATGACAC	137604757	True	NA	15	True	AATAAA	-20	NA	137618935	137836127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_137619050_137710966_137711031_137716625_137717183_137728348_137728530_137743370_137743529_137743901_137744091_137752330_137752409_137754170_137754292_137757879_137758012_137762674_137762821_137776617_137776845_137777881_137778056_137779634_137779718_137782290_137782398_137790847_137790971_137798812_137798915_137800879_137800985_137811460_137811616_137813005_137813174_137813385_137813531_137814430_137814509_137815946_137816063_137817438_137817526_137818059_137818139_137834348_137834525_137834772
transcript_201335.nic	chr9	+	4700	26	NIC	ENSG00000181090.21	novel	5095	27	NA	NA	-56	0	combination_of_known_junctions	TRUE	canonical	3	113	junction_6	117.958677510389	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTGCTGATTCTGGTGTGG	137604757	True	NA	7	True	AATAAA	-18	NA	137618935	137835741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_137619050_137710966_137711031_137716625_137717183_137728348_137728530_137743370_137743529_137743901_137744091_137754170_137754292_137757879_137758012_137762674_137762821_137775108_137775253_137776617_137776845_137777881_137778056_137779634_137779718_137782290_137782398_137790847_137790971_137798812_137798915_137800879_137800985_137811460_137811616_137813005_137813174_137813385_137813531_137814430_137814509_137815946_137816063_137817438_137817526_137818059_137818139_137834348_137834525_137834772
transcript_201338.nic	chr9	+	4613	26	NIC	ENSG00000181090.21	novel	5095	27	NA	NA	-56	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_10	128.186514111275	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTGCTGATTCTGGTGTGG	137604757	True	NA	7	True	AATAAA	-18	NA	137618935	137835741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_137619050_137710966_137711031_137716625_137717183_137728348_137728530_137743391_137743529_137743901_137744091_137752330_137752409_137754170_137754292_137757879_137758012_137762674_137762821_137776617_137776845_137777881_137778056_137779634_137779718_137782290_137782398_137790847_137790971_137798812_137798915_137800879_137800985_137811460_137811616_137813005_137813174_137813385_137813531_137814430_137814509_137815946_137816063_137817438_137817526_137818059_137818139_137834348_137834525_137834772
transcript_201340.nic	chr9	+	5065	26	NIC	ENSG00000181090.21	novel	5095	27	NA	NA	-56	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_6	113.710467416153	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGTTTTTATTATGACAC	137604757	True	NA	15	True	AATAAA	-20	NA	137618935	137836127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_137619050_137710966_137711031_137716625_137717183_137728348_137728530_137743391_137743529_137743901_137744091_137754170_137754292_137757879_137758012_137762674_137762821_137775108_137775253_137776617_137776845_137777881_137778056_137779634_137779718_137782290_137782398_137790847_137790971_137798812_137798915_137800879_137800985_137811460_137811616_137813005_137813174_137813385_137813531_137814430_137814509_137815946_137816063_137817438_137817526_137818059_137818139_137834348_137834525_137834772
transcript_201362.known	chr9	+	2707	16	FSM	ENSG00000181090.21	ENST00000462484.5	2707	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_15	146.98335506671	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCAGCCTTTTGAAGCCA	137604813	True	NA	NA	False	AATAAA	-17	NA	137618991	137784393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137619050_137710966_137711031_137716625_137717183_137728348_137728530_137743370_137743529_137743901_137744091_137752330_137752409_137754170_137754292_137757879_137758012_137762674_137762821_137775108_137775253_137776617_137776845_137777881_137778056_137779634_137779718_137782290_137782398_137784105
transcript_201364.known	chr9	+	2679	16	FSM	ENSG00000181090.21	ENST00000371394.6	2679	16	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_15	176.190502960101	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATTGCATATATGGTCACT	137604814	True	NA	NA	False	AATAAA	-21	NA	137618992	137792256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr9_+_137619050_137716625_137717183_137728348_137728530_137743370_137743529_137743901_137744091_137752330_137752409_137754170_137754292_137757879_137758012_137762674_137762821_137775108_137775253_137776617_137776845_137777881_137778056_137779634_137779718_137782290_137782398_137790847_137790971_137792054
transcript_201371.nic	chr9	+	963	5	ISM	ENSG00000181090.21	ENST00000629335.2	3600	10	-77	21340	-56	-2185	5prime_fragment	FALSE	canonical	3	208	junction_4	108.021988502342	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAAGAATGGGAACCTATAG	137604757	True	NA	NA	False	AAGAAA	-4	NA	137618935	137743417	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr9_+_137619050_137710966_137711031_137716625_137717183_137728348_137728530_137743370
transcript_201372.nic	chr9	+	942	5	NIC	ENSG00000181090.21	novel	3600	10	NA	NA	-56	-2185	combination_of_known_junctions	FALSE	canonical	3	254	junction_4	90.4986187739901	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAAGAATGGGAACCTATAG	137604757	True	NA	NA	False	AAGAAA	-4	NA	137618935	137743417	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_137619050_137710966_137711031_137716625_137717183_137728348_137728530_137743391
transcript_201384.nnic	chr9	+	2827	6	NNC	ENSG00000159247.13	novel	1735	5	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	31.6012657974329	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTTCACCTCCATCTT	138150007	False	NA	25	True	AATAAA	-15	NA	138150063	138177433	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_138150309_138157351_138157470_138174045_138174873_138175362_138175472_138175600_138175902_138176206
transcript_201395.nnic	chr9	+	2628	5	NNC	ENSG00000159247.13	novel	1735	5	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	26.9490259564237	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTTCACCTCCATCTT	138149992	False	NA	25	True	AATAAA	-15	NA	138150048	138177433	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr9_+_138150309_138174141_138174873_138175362_138175472_138175600_138175902_138176206
transcript_201398.nic	chr9	+	2389	5	NIC	ENSG00000159247.13	novel	1735	5	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	33.7860918130523	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTTCACCTCCATCTT	138150003	False	NA	25	True	AATAAA	-15	NA	138150059	138177433	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_138150309_138174369_138174873_138175362_138175472_138175600_138175902_138176206
transcript_201405.nnic	chr9	+	1696	4	NIC	ENSG00000159247.13	novel	1735	5	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	21.2759645296439	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTTCACCTCCATCTT	138150003	False	NA	25	True	AATAAA	-15	NA	138150059	138177433	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr9_+_138150309_138175362_138175472_138175600_138175712_138176206
transcript_201416.known	chrM	+	954	1	FSM	ENSG00000211459.2	ENST00000389680.2	954	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1863	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAGTGTAGCTTAACACAA	-105703	True	NA	NA	False	NA	NA	NA	647	1601	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrM_+_600_1600
transcript_201417.known	chrM	+	1559	1	FSM	ENSG00000210082.2	ENST00000387347.2	1559	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2705	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAGATGGCAGAGCCCGG	-5784	False	NA	NA	False	NA	NA	NA	1670	3229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrM_+_1700_3200
transcript_201418.known	chrM	+	956	1	FSM	ENSG00000198888.2	ENST00000361390.2	956	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	776	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATATGTCTGATAAAAG	3041	False	NA	NA	False	NA	NA	NA	3306	4262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrM_+_3300_4300
transcript_201419.known	chrM	+	1042	1	FSM	ENSG00000198763.3	ENST00000361453.3	1042	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	690	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATTTAGGTTAAATACA	4024	False	NA	NA	False	NA	NA	NA	4469	5511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrM_+_4500_5500
transcript_201420.known	chrM	+	1542	1	FSM	ENSG00000198804.2	ENST00000361624.2	1542	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	764	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAAAGGAAGGAATCGAA	-93	True	NA	NA	False	CATAAA	-8	NA	5903	7445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrM_+_5900_7400
transcript_201421.known	chrM	+	684	1	FSM	ENSG00000198712.1	ENST00000361739.1	684	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7072	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCCCTCTACCCCCTCTA	1651	True	NA	NA	False	NA	NA	NA	7585	8269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrM_+_7600_8300
transcript_201422.known	chrM	+	784	1	FSM	ENSG00000198938.2	ENST00000362079.2	784	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8471	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTTTTAGTATAAATAGT	4564	True	NA	NA	False	NA	NA	NA	9206	9990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrM_+_9200_10000
transcript_201423.known	chrM	+	207	1	FSM	ENSG00000228253.1	ENST00000361851.1	207	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTACCCGCCGCAGTACTG	867	True	NA	NA	False	AATGAA	-42	NA	8365	8572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrM_+_8400_8600
transcript_201424.known	chrM	+	681	1	FSM	ENSG00000198899.2	ENST00000361899.2	681	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	608	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCCACCAATCACATGCC	8201	False	NA	NA	False	NA	NA	NA	8526	9207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrM_+_8500_9200
transcript_201425.known	chrM	+	346	1	FSM	ENSG00000198840.2	ENST00000361227.2	346	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	478	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGTATATAGTTTAAACAAA	8743	False	NA	NA	False	AAAAAG	-19	NA	10058	10404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrM_+_10100_10400
transcript_201426.known	chrM	+	297	1	FSM	ENSG00000212907.2	ENST00000361335.1	297	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAATCGTCCCAACAATT	-1540	True	NA	NA	False	NA	NA	NA	10469	10766	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrM_+_10500_10800
transcript_201427.known	chrM	+	1378	1	FSM	ENSG00000198886.2	ENST00000361381.2	1378	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	951	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAATATAGTTTAACCAAA	-421	False	NA	NA	False	NA	NA	NA	10759	12137	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrM_+_10800_12100
transcript_201428.known	chrM	+	1812	1	FSM	ENSG00000198786.2	ENST00000361567.2	1812	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATTCCCCCGAGCAATCT	10068	True	NA	NA	False	NA	NA	NA	12336	14148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrM_+_12300_14100
transcript_201429.known	chrM	-	525	1	FSM	ENSG00000198695.2	ENST00000361681.2	525	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGATTAGGAGTAGGG	NA	False	NA	NA	False	NA	NA	NA	14673	14148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrM_-_14100_14700
transcript_201430.known	chrM	+	1141	1	FSM	ENSG00000198727.2	ENST00000361789.2	1141	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1745	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCTTGTAGTATAAACTAA	14461	False	NA	NA	False	AAAACA	-19	NA	14746	15887	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrM_+_14700_15900
transcript_201437.nnic	chrX	+	2137	8	NNC	ENSG00000182378.15	novel	5318	7	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_7	55.1476681839083	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGTATGAATTTTATTA	276707	True	NA	13	True	AATAAA	-21	NA	281361	303356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_281685_284166_284315_288732_288870_290647_290777_291498_291655_293034_293219_299096_299393_302592
transcript_201439.nnic	chrX	+	1967	8	NNC	ENSG00000182378.15	novel	5318	7	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	73.7635494298491	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGTATGAATTTTATTA	276707	True	NA	13	True	AATAAA	-21	NA	281361	303356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_281685_284166_284315_288732_288870_290647_290777_291498_291655_293034_293219_299096_299459_302828
transcript_201441.nnic	chrX	+	2017	8	NNC	ENSG00000182378.15	novel	5318	7	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	73.7635494298491	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGTATGAATTTTATTA	276707	True	NA	13	True	AATAAA	-21	NA	281361	303356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_281685_284166_284315_288732_288870_290647_290777_291498_291655_293034_293219_299096_299490_302809
transcript_201455.nnic	chrX	+	1865	8	NNC	ENSG00000182378.15	novel	587	5	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	81.7941667497488	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGTATGAATTTTATTA	282827	True	NA	13	True	AATAAA	-21	NA	283469	303356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_283521_284166_284315_288732_288870_290647_290777_291498_291655_293034_293219_299096_299393_302592
transcript_201460.known	chrX	+	5318	7	FSM	ENSG00000182378.15	ENST00000381657.8	5318	7	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	17.4706102418382	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGTATGAATTTTATTA	276726	True	NA	13	True	AATAAA	-21	NA	281380	303356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_281685_284166_284315_288732_288870_290647_290777_291498_291655_293034_293219_299096
transcript_201477.nnic	chrX	-	2369	11	NNC	ENSG00000178605.13	novel	1907	10	NA	NA	-122	1170	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	103.655245887509	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGACTTTAATGATGTT	NA	False	NA	-13	True	AATAAA	-12	NA	318941	303358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_303478_304528_305198_307359_307513_307731_307881_311418_311628_312765_312925_314149_314218_314889_315021_315228_315300_316913_317052_318438
transcript_201487.known	chrX	-	1907	10	FSM	ENSG00000178605.13	ENST00000326153.9	1907	10	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_8	33.1588023432618	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCATTTCCAGTTCCTCC	NA	False	NA	-5	True	ATTAAA	-22	NA	318819	304749	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_305198_307359_307513_307731_307881_311418_311628_312765_312925_314149_314218_314889_315021_315228_315300_316913_317052_318438
transcript_20149.known	chr1	-	4764	22	FSM	ENSG00000143799.14	ENST00000676709.1	4764	22	0	0	0	0	multi-exon	FALSE	canonical	3	2138	junction_16	235.376901403442	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACTTACCCAAGGGCTAA	-226350415	True	NA	48	True	ATTAAA	-14	NA	226408154	226360747	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_226361542_226361968_226362084_226363098_226364071_226365001_226365155_226365953_226366053_226367479_226367609_226368198_226368322_226370433_226370518_226374225_226374355_226377107_226377304_226379141_226379275_226379572_226379642_226379921_226380165_226381067_226381209_226383035_226383184_226385503_226385681_226386325_226386443_226388655_226388756_226390409_226390625_226392198_226392315_226402213_226402380_226407809
transcript_201505.nic	chrX	-	1797	13	NIC	ENSG00000167393.18	novel	2378	13	NA	NA	252	0	combination_of_known_junctions	FALSE	canonical	3	83	junction_12	107.957649875619	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGTTGATTGCCGCTGTG	NA	False	NA	-14	True	GATAAA	-20	NA	373792	334234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_334518_338603_338711_338777_338897_340764_340941_341306_341397_341882_341932_345515_345673_346173_346261_346700_346776_347233_347337_347589_347694_361404_361591_373531
transcript_201506.known	chrX	-	2378	13	FSM	ENSG00000167393.18	ENST00000390665.9	2378	13	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_12	45.1819623547077	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTCACGGGCTCGGC	NA	False	NA	1	True	NA	NA	NA	386907	333932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_334518_338603_338711_338777_338897_340764_340941_341306_341397_341882_341932_345515_345673_346173_346261_346700_346776_347233_347337_347589_347694_361404_361591_386367
transcript_201517.nic	chrX	-	2207	12	NIC	ENSG00000167393.18	novel	2378	13	NA	NA	-16	0	intron_retention	FALSE	canonical	3	331	junction_11	46.7652834433535	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGTTGATTGCCGCTGTG	NA	False	NA	-14	True	GATAAA	-20	NA	386971	334234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_334518_338603_338897_340764_340941_341306_341397_341882_341932_345515_345673_346173_346261_346700_346776_347233_347337_347589_347694_361404_361591_386367
transcript_201564.known	chrX	-	1451	4	FSM	ENSG00000169100.14	ENST00000381401.11	1451	4	0	0	0	0	multi-exon	FALSE	canonical	3	4968	junction_3	246.725668619128	2447	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGCCTGGCCACGCACC	NA	False	NA	-27	True	AATAAA	-18	NA	1392113	1386151	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_1386760_1387278_1387420_1389240_1389728_1391898
transcript_201586.known	chrX	-	2065	13	FSM	ENSG00000169093.16	ENST00000381317.9	2065	13	0	0	0	0	multi-exon	TRUE	canonical	1	187	junction_11	84.1966530741507	1648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCCTCCTCCATAGGG	NA	False	NA	-2	True	AATAAA	-16	NA	1452909	1403138	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_1403490_1412731_1412855_1417972_1418117_1418981_1419115_1421657_1421843_1425524_1425688_1427733_1428122_1432268_1432378_1435021_1435084_1435693_1435759_1439096_1439145_1442185_1442318_1452747
transcript_201591.known	chrX	-	2035	12	FSM	ENSG00000169093.16	ENST00000381333.9	2035	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	137.164436515549	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTGCCTCCTCCATAG	NA	False	NA	-4	True	AATAAA	-14	NA	1452929	1403140	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_1403490_1412731_1412855_1417972_1418117_1418981_1419115_1421657_1421843_1425524_1425688_1427733_1428122_1432268_1432378_1435021_1435084_1435693_1435759_1442185_1442318_1452747
transcript_201599.known	chrX	-	407	2	FSM	ENSG00000182162.11	ENST00000460672.6	407	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTCTCTCTGTGGGTGC	NA	False	NA	NA	False	NA	NA	NA	1494353	1466436	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_1466583_1494092
transcript_201603.known	chrX	+	3232	6	FSM	ENSG00000197976.12	ENST00000474361.6	3232	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_4	202.763902112777	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTCCAATGAACTAAAATT	1587864	True	NA	3	True	AATAAA	-5	NA	1591622	1602502	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_1591770_1593443_1594225_1595383_1595533_1599191_1599433_1600137_1600208_1600658
transcript_201605.known	chrX	+	3199	5	FSM	ENSG00000197976.12	ENST00000313871.9	3199	5	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_4	48.2979036812158	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCACGCTTACGATTTT	1587845	True	NA	21	True	AATAAA	-23	NA	1591603	1602520	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_1591770_1593443_1594225_1595383_1595533_1599191_1599433_1600658
transcript_201607.known	chrX	+	2187	4	FSM	ENSG00000197976.12	ENST00000381261.8	2187	4	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_2	21.4009345590327	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGGCCGCTTGTGACCTAA	1587866	True	NA	NA	False	NA	NA	NA	1591624	1600303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_1591770_1593443_1594225_1595383_1595533_1599191
transcript_201612.nic	chrX	-	1664	8	NIC	ENSG00000169084.15	novel	2579	7	NA	NA	-38	-1254	combination_of_known_junctions	FALSE	canonical	3	27	junction_4	99.3979838008471	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCATTTTCCTTGCCGC	NA	False	NA	-12	True	CATAAA	-23	NA	2500688	2220759	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_2221230_2243022_2243231_2266739_2266948_2291501_2291604_2392353_2392475_2408744_2408814_2425196_2425305_2500310
transcript_201618.nic	chrX	-	2797	7	NIC	ENSG00000169084.15	novel	2579	7	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	3	106	junction_6	59.2689257162263	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTCATCCTCCGGGAATG	NA	False	NA	NA	False	AATAAA	-30	NA	2500688	2219505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_2221230_2243022_2243231_2266739_2266948_2291501_2291604_2408744_2408814_2425196_2425305_2500310
transcript_201619.known	chrX	-	2579	7	FSM	ENSG00000169084.15	ENST00000334651.11	2579	7	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_6	58.6451191489965	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTCATCCTCCGGGAATG	NA	False	NA	NA	False	AATAAA	-30	NA	2500976	2219505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_2221230_2243022_2243231_2266739_2266948_2291501_2291604_2408744_2408814_2425196_2425305_2500816
transcript_201623.nic	chrX	-	1543	7	NIC	ENSG00000169084.15	novel	2579	7	NA	NA	-38	-1254	combination_of_known_junctions	FALSE	canonical	3	106	junction_6	59.2689257162263	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCATTTTCCTTGCCGC	NA	False	NA	-12	True	CATAAA	-23	NA	2500688	2220759	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_2221230_2243022_2243231_2266739_2266948_2291501_2291604_2408744_2408814_2425196_2425305_2500310
transcript_201626.nic	chrX	-	1461	7	NIC	ENSG00000169084.15	novel	2579	7	NA	NA	-38	-1336	combination_of_known_junctions	FALSE	canonical	3	106	junction_6	59.2689257162263	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTCTTCAACCATAAACT	NA	False	NA	0	True	AATAAA	-25	NA	2500688	2220841	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_2221230_2243022_2243231_2266739_2266948_2291501_2291604_2408744_2408814_2425196_2425305_2500310
transcript_201630.nnic	chrX	-	1256	6	NIC	ENSG00000169084.15	novel	2579	7	NA	NA	-39	-1254	combination_of_known_splicesites	FALSE	canonical	2	14	junction_5	96.6891927776833	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCATTTTCCTTGCCGC	NA	False	NA	-12	True	CATAAA	-23	NA	2501015	2220759	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_2221230_2243022_2243231_2266739_2266948_2291501_2291604_2408744_2408814_2500816
transcript_201636.known	chrX	-	490	4	FSM	ENSG00000169084.15	ENST00000430536.7	490	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	98.5641359161074	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAAGGAAGCTCTGCTG	NA	False	NA	NA	False	NA	NA	NA	2500960	2337830	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_2338000_2408744_2408814_2425196_2425305_2500816
transcript_201643.nic	chrX	-	980	3	ISM	ENSG00000169084.15	ENST00000430536.7	490	4	-20	70275	-4	-70275	5prime_fragment	FALSE	canonical	3	108	junction_2	66.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATAAATCAAACAGGAATAT	NA	False	NA	NA	False	AAAAAG	-16	NA	2500980	2408105	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_2408814_2425196_2425305_2500816
transcript_201644.nic	chrX	-	540	3	ISM	ENSG00000169084.15	ENST00000478825.7	679	5	-99	117258	-38	-70929	5prime_fragment	FALSE	canonical	3	106	junction_2	67.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGAACGACAAAGGTACC	NA	False	NA	NA	False	AATAAA	-9	NA	2500688	2408759	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_2408814_2425196_2425305_2500310
transcript_201645.nic	chrX	-	393	3	ISM	ENSG00000169084.15	ENST00000430536.7	490	4	-87	70929	-71	-70929	5prime_fragment	FALSE	canonical	3	108	junction_2	66.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGAACGACAAAGGTACC	NA	False	NA	NA	False	AATAAA	-9	NA	2501047	2408759	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_2408814_2425196_2425305_2500816
transcript_201647.known	chrX	-	4507	2	FSM	ENSG00000214717.12	ENST00000381222.8	4507	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGCGTGTCCGTCTGGAC	NA	False	NA	-3	True	AATAAA	-35	NA	2500967	2486413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_2490770_2500816
transcript_201648.known	chrX	-	947	2	FSM	ENSG00000214717.12	ENST00000461691.6	947	2	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGACATCGTGAAGGCGT	NA	False	NA	NA	False	NA	NA	NA	2500895	2489904	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_2490773_2500816
transcript_201649.known	chrX	-	2832	2	FSM	ENSG00000214717.12	ENST00000381218.8	2832	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACAAGAGAGGTGGCTTT	NA	False	NA	NA	False	AAAAAG	-10	NA	2500555	2488185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_2490773_2500310
transcript_201663.nnic	chrX	-	1352	2	FSM	ENSG00000289007.1	ENST00000686824.1	1371	2	14	5	-2	0	multi-exon	FALSE	canonical	2	16	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCTCAGGTGCACCTCT	NA	False	NA	-2	True	AATAAA	-17	NA	2609193	2566028	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_2567293_2609105
transcript_201665.known	chrX	+	984	10	FSM	ENSG00000223773.8	ENST00000430562.7	1030	10	46	0	2	0	multi-exon	FALSE	canonical	3	47	junction_7	25.1783759858326	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGAGTATTGGTGTCAAC	2607854	True	NA	15	True	AATAAA	-16	NA	2609393	2638329	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_2609482_2610995_2611039_2612149_2612219_2615815_2615970_2618739_2618785_2619428_2619498_2622689_2622735_2623384_2623454_2626596_2626643_2637973
transcript_201669.nic	chrX	+	1118	9	FSM	ENSG00000223773.8_ENSG00000277120.5	ENST00000685470.1	952	9	-166	0	24	0	multi-exon	FALSE	canonical	3	63	junction_6	17.9787200601155	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGAGTATTGGTGTCAAC	NA	False	NA	15	True	AATAAA	-16	NA	2609214	2638329	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_2609482_2610995_2611039_2612149_2612219_2615815_2615970_2618739_2618785_2619428_2619498_2623384_2623454_2626596_2626643_2637973
transcript_201670.known	chrX	+	2788	9	FSM	ENSG00000223773.8	ENST00000435581.7	2788	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	37.2558720203943	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAGGAGGCTGAGGCA	2607852	True	NA	NA	False	ATTAAA	-10	NA	2609391	2657229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_2609482_2610995_2611039_2612149_2612219_2615815_2615970_2618739_2618785_2619428_2619498_2623384_2623454_2626596_2626643_2655026
transcript_201677.known	chrX	+	602	4	FSM	ENSG00000223773.8	ENST00000431582.6	602	4	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_3	1.4142135623731	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAGAAGCCAACTTGTTT	2607808	True	NA	NA	False	NA	NA	NA	2609347	2616171	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_2609482_2610995_2611039_2612149_2612219_2615815
transcript_201678.known	chrX	+	573	11	FSM	ENSG00000002586.20	ENST00000623253.4	573	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	300.929493403355	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATTGTCGGCAGAAACAG	2691302	False	NA	NA	False	NA	NA	NA	2691360	2740804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_2691428_2714421_2714455_2717604_2717653_2719660_2719706_2720355_2720425_2722626_2722675_2723313_2723365_2726259_2726374_2733356_2733375_2738202_2738257_2740778
transcript_201680.known	chrX	+	1129	10	FSM	ENSG00000002586.20	ENST00000381192.10	1129	10	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_8	58.2404551603432	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTTTTTTTTTTTTACTT	2683405	True	NA	11	True	AATAAA	-18	NA	2691294	2741309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_2691428_2714421_2714455_2717604_2717653_2719660_2719706_2720355_2720425_2722626_2722675_2723313_2723365_2726259_2726374_2738199_2738257_2740778
transcript_201683.known	chrX	+	892	9	FSM	ENSG00000002586.20	ENST00000381187.8	892	9	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	229.837986416519	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACCCCACCGAGGCACCC	2683386	True	NA	NA	False	NA	NA	NA	2691275	2741101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_2691428_2714421_2714455_2719660_2719706_2720355_2720425_2722626_2722675_2723313_2723365_2726259_2726374_2738199_2738257_2740778
transcript_201684.known	chrX	+	3393	12	FSM	ENSG00000056998.20	ENST00000381163.7	3393	12	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	95.615794538817	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGGCCTCCTTCCAG	2828788	False	NA	29	True	ATTAAA	-14	NA	2828821	2882818	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_2828976_2830060_2830196_2842997_2843091_2843212_2843355_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2875809_2875915_2877199_2877308_2881051
transcript_201687.known	chrX	+	3192	11	FSM	ENSG00000056998.20	ENST00000398806.8	3192	11	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_9	45.7475682413831	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGGCCTCCTTCCAG	2826403	True	NA	29	True	ATTAAA	-14	NA	2828929	2882818	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_2828976_2830060_2830196_2843212_2843355_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2875809_2875915_2877199_2877308_2881051
transcript_201692.nnic	chrX	+	3266	11	NNC	ENSG00000056998.20	novel	3192	11	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	76.1551705401544	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGGCCTCCTTCCAG	2826440	True	NA	29	True	ATTAAA	-14	NA	2828966	2882818	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_2829087_2830060_2830196_2843212_2843355_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2875809_2875915_2877199_2877308_2881051
transcript_201694.nnic	chrX	+	3235	11	NNC	ENSG00000056998.20	novel	1293	9	NA	NA	-92	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	76.6514840038991	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGGCCTCCTTCCAG	2829167	False	NA	29	True	ATTAAA	-14	NA	2829179	2882818	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_2829269_2830060_2830196_2843212_2843355_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2875809_2875915_2877199_2877308_2881051
transcript_201699.nic	chrX	+	3091	10	NIC	ENSG00000056998.20	novel	3192	11	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	3	8	junction_9	81.8532260652196	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCATGTGGCCTCCTTCC	2826394	True	NA	27	True	ATTAAA	-12	NA	2828920	2882816	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_2828976_2830060_2830196_2843212_2843355_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2875809_2875915_2881051
transcript_201703.nic	chrX	+	3244	10	NIC	ENSG00000056998.20	novel	3192	11	NA	NA	-86	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_2	71.0838489408594	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGGCCTCCTTCCAG	NA	False	NA	29	True	ATTAAA	-14	NA	2828735	2882818	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_2828976_2830060_2830196_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2875809_2875915_2877199_2877308_2881051
transcript_201709.nic	chrX	+	2461	9	NIC	ENSG00000056998.20	novel	3192	11	NA	NA	4	-529	combination_of_known_junctions	FALSE	canonical	3	64	junction_8	70.249110314651	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGGAAGGTTTATTTCT	2826391	True	NA	30	True	AATAAA	-24	NA	2828917	2882288	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_2828976_2830060_2830196_2843212_2843355_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2881051
transcript_201710.nic	chrX	+	3172	9	NIC	ENSG00000056998.20	novel	3192	11	NA	NA	-86	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_8	70.249110314651	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATGTGGCCTCCTTCCA	NA	False	NA	28	True	ATTAAA	-13	NA	2828735	2882817	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_2828976_2830060_2830196_2843212_2843355_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2881051
transcript_201715.known	chrX	+	2852	8	FSM	ENSG00000056998.20	ENST00000381161.5	2852	8	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	91.8488109973812	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATGTGGCCTCCTTCCA	2826387	True	NA	28	True	ATTAAA	-13	NA	2828913	2882817	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_2828976_2830060_2830196_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2881051
transcript_201720.known	chrX	-	5145	10	FSM	ENSG00000006756.16	ENST00000381154.6	5145	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	5.24933858267454	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCATTTGTTTGTT	NA	False	NA	-1	True	AATAAA	-19	NA	2929339	2903971	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_2907633_2908720_2908843_2909816_2909980_2910658_2910794_2915555_2915693_2917803_2918228_2920600_2920724_2921902_2922025_2925615_2925766_2929231
transcript_201724.nic	chrX	-	1500	6	NIC	ENSG00000006756.16	novel	2160	7	NA	NA	-16	270	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	6.8	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACGAAGAATAGGGAGAAAA	NA	False	NA	NA	False	AATAAA	-2	NA	2929365	2914226	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_2914774_2917803_2918228_2920600_2920724_2921902_2922025_2925615_2925766_2929231
transcript_201729.known	chrX	-	2219	11	FSM	ENSG00000157399.17	ENST00000381134.9	2219	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	11.5191145493046	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGGCAACAGAGCAAGACC	NA	False	NA	NA	False	NA	NA	NA	2964341	2934520	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_2935191_2936741_2936864_2938094_2938258_2943064_2943200_2945997_2946135_2949303_2949728_2953142_2953266_2955415_2955538_2958273_2958436_2960377_2960421_2964223
transcript_201730.known	chrX	-	2678	11	FSM	ENSG00000157399.17	ENST00000684364.1	2678	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	11.7851601601336	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAACAAACAAACATTAAT	NA	False	NA	NA	False	AATAAA	-4	NA	2964288	2934044	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_2935191_2936741_2936864_2938094_2938258_2943064_2943200_2945997_2946135_2949303_2949728_2953142_2953266_2955415_2955538_2958273_2958424_2960377_2960469_2964223
transcript_201735.known	chrX	-	1317	9	FSM	ENSG00000157399.17	ENST00000684738.1	1317	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	14.5639752471638	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCTGCAGTGAAAAGCTG	NA	False	NA	-21	True	NA	NA	NA	2964263	2934831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_2935191_2936741_2936864_2938094_2938258_2943064_2943200_2953142_2953266_2955415_2955538_2958273_2958436_2960377_2960469_2964223
transcript_201737.known	chrX	-	1338	6	FSM	ENSG00000157399.17	ENST00000682745.1	1338	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	17.9666357451806	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCGACCTCCCAGACTCAA	NA	False	NA	NA	False	NA	NA	NA	2964288	2951737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_2952561_2953142_2953266_2955415_2955538_2958273_2958436_2960377_2960421_2964223
transcript_201741.known	chrX	-	6102	9	FSM	ENSG00000183943.6	ENST00000262848.6	6102	9	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	14.3695641896336	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGCTGTGGCTTTTCTCCT	NA	False	NA	29	True	NA	NA	NA	3713649	3604339	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_3608946_3612176_3612326_3615814_3615893_3621258_3621317_3626418_3626515_3641851_3641972_3655148_3655413_3674597_3674767_3713087
transcript_201743.nic	chrX	-	2988	9	NIC	ENSG00000183943.6	novel	669	7	NA	NA	-27	1081	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	35.7698808356975	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCTCTGAGGAAGCATGT	NA	False	NA	-12	True	AATAAA	-22	NA	3713676	3609869	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_3611335_3612176_3612326_3615814_3615893_3621258_3621317_3626418_3626515_3641851_3641972_3655148_3655413_3674597_3674767_3713087
transcript_201744.nnic	chrX	-	2470	8	NIC	ENSG00000183943.6	novel	6102	9	NA	NA	-27	746	combination_of_known_splicesites	FALSE	canonical	2	10	junction_5	49.8904923255904	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGCAATGGCTTTGTGCT	NA	False	NA	NA	False	NA	NA	NA	3713676	3607878	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_3608946_3612176_3612326_3615814_3615893_3621258_3621317_3626418_3626515_3655148_3655413_3674597_3674767_3713087
transcript_201746.nnic	chrX	-	2868	8	NIC	ENSG00000183943.6	novel	669	7	NA	NA	-27	1081	combination_of_known_splicesites	FALSE	canonical	2	10	junction_5	57.0105611411838	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCTCTGAGGAAGCATGT	NA	False	NA	-12	True	AATAAA	-22	NA	3713676	3609869	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_3611335_3612176_3612326_3615814_3615893_3621258_3621317_3626418_3626515_3655148_3655413_3674597_3674767_3713087
transcript_201762.nic	chrX	-	2309	7	NIC	ENSG00000285756.2	novel	3629	13	NA	NA	-115	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_4	56.6333235236405	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTGTGTGCTGGTTGGTC	NA	False	NA	-4	True	ATTAAA	-25	NA	3843972	3817527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_3817779_3818441_3818501_3822373_3822581_3825087_3825232_3826600_3826730_3828505_3829393_3843340
transcript_2018.known	chr1	-	1706	9	FSM	ENSG00000215788.11	ENST00000480393.5	1706	9	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_8	33.1464553157649	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCTTCTTGGCGTTTCTGC	-6466165	False	773	NA	False	ATTAAA	-31	NA	6466175	6461150	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6461763_6461993_6462175_6462628_6462667_6462862_6463128_6464374_6464454_6464551_6464720_6465087_6465223_6465439_6465561_6466068
transcript_201820.nnic	chrX	-	2581	6	NNC	ENSG00000285756.2	novel	2670	11	NA	NA	-67	17	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_4	52.9475211884371	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGGCATAGTGGTGCACAT	NA	False	NA	NA	False	TATAAA	-22	NA	3882384	3854331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_3854928_3860789_3860997_3863501_3863646_3865013_3865143_3866921_3867807_3881764
transcript_201821.nnic	chrX	-	2553	6	NNC	ENSG00000285756.2	novel	2670	11	NA	NA	-67	17	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	51.3949413853153	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGGCATAGTGGTGCACAT	NA	False	NA	NA	False	TATAAA	-22	NA	3882384	3854331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_3854928_3860789_3860997_3863501_3863646_3865013_3865143_3866949_3867807_3881764
transcript_201829.known	chrX	-	1470	5	FSM	ENSG00000285756.2	ENST00000662024.1	1470	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	65.4083328024801	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTGTGTGCTGGTTGGTC	NA	False	NA	-4	True	ATTAAA	-25	NA	3843566	3817527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_3817779_3818441_3818501_3818656_3818704_3828505_3829393_3843340
transcript_20185.nic	chr1	-	995	5	ISM	ENSG00000143799.14	ENST00000676709.1	4764	22	-95	27950	-95	0	5prime_fragment	FALSE	canonical	3	2242	junction_4	19.6659604392971	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAGACAAGGATAG	NA	False	NA	25	True	AAGAAA	-7	NA	226408249	226388697	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_226388756_226390409_226390625_226392198_226392315_226402213_226402380_226407809
transcript_201865.nnic	chrX	-	2452	5	NIC	ENSG00000285756.2	novel	1574	3	NA	NA	-67	17	combination_of_known_splicesites	FALSE	canonical	3	19	junction_3	56.139892233598	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGGCATAGTGGTGCACAT	NA	False	NA	NA	False	TATAAA	-22	NA	3882384	3854331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_3854928_3860789_3860997_3863501_3863646_3866921_3867807_3881764
transcript_201880.known	chrX	-	1271	4	FSM	ENSG00000285756.2	ENST00000475317.5	1271	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	31.6333157709821	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTGTGTGCTGGTTGGTC	NA	False	NA	-4	True	ATTAAA	-25	NA	3843415	3817527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_3817779_3818441_3818501_3828505_3829388_3843336
transcript_201881.known	chrX	-	856	4	FSM	ENSG00000285756.2	ENST00000425492.5	856	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	72.0385699160912	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTGTGTGCTGGTTGGTC	NA	False	NA	-4	True	ATTAAA	-25	NA	3843857	3817527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_3817779_3818441_3818501_3829363_3829393_3843340
transcript_2019.known	chr1	-	1441	9	FSM	ENSG00000215788.11	ENST00000351959.9	1441	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	40.2769707773561	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTGAGATCGCGGTATT	-6466165	False	773	NA	False	NA	NA	NA	6466175	6461203	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6461763_6461993_6462175_6462628_6462664_6463071_6463128_6464374_6464454_6464551_6464720_6465087_6465223_6465439_6465561_6466068
transcript_20191.known	chr1	-	6269	8	FSM	ENSG00000143772.11	ENST00000429204.6	6269	8	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	4.19912527334259	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCTGTCTGTGGTGTGATC	-226739075	True	NA	-2	True	AATAAA	-14	NA	226739282	226631689	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_226634887_226637678_226637751_226639556_226639659_226641920_226642126_226647166_226647381_226648671_226648772_226735526_226737664_226739040
transcript_201916.nic	chrX	-	3428	3	NIC	ENSG00000285756.2	novel	1972	2	NA	NA	-67	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	72	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGCCTCCACTTACAAACT	NA	False	NA	NA	False	ATTAAA	-19	NA	3882384	3853004	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_3854928_3866921_3867807_3881764
transcript_201918.nic	chrX	-	3392	3	NIC	ENSG00000285756.2	novel	2670	11	NA	NA	-67	-3	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	68	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGAAAGTAGCCTCCACT	NA	False	NA	NA	False	ATTAAA	-11	NA	3882384	3853012	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_3854928_3866949_3867807_3881764
transcript_20192.known	chr1	-	3146	3	FSM	ENSG00000143772.11	ENST00000366784.1	3146	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAGATTGTACTTTA	-226739116	True	NA	NA	False	AATAAA	-16	NA	226739323	226707189	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_226707916_226735526_226737664_226739040
transcript_201923.nic	chrX	-	2224	3	NIC	ENSG00000285756.2	novel	1365	2	NA	NA	-67	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	68	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGGAGAAGAAGGAAGGAG	NA	False	NA	NA	False	NA	NA	NA	3882384	3854180	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_3854928_3866949_3867807_3881764
transcript_201925.nic	chrX	-	2073	3	NIC	ENSG00000285756.2	novel	2670	11	NA	NA	-67	17	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	68	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGGCATAGTGGTGCACAT	NA	False	NA	NA	False	TATAAA	-22	NA	3882384	3854331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_3854928_3866949_3867807_3881764
transcript_201926.nic	chrX	-	2084	3	NIC	ENSG00000285756.2	novel	793	2	NA	NA	-67	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	72	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAACAAAAAAATAG	NA	False	NA	NA	False	TATAAA	-5	NA	3882384	3854348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_3854928_3866921_3867807_3881764
transcript_201927.known	chrX	-	2155	3	FSM	ENSG00000285756.2	ENST00000438107.1	2155	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	67.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTCAATTTTGATGC	NA	False	NA	NA	False	AATAGA	-15	NA	3882317	3864397	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_3865143_3866949_3867807_3881764
transcript_201933.nic	chrX	-	3015	2	ISM	ENSG00000285756.2	ENST00000438107.1	2155	3	-67	1014	-67	-1014	5prime_fragment	FALSE	canonical	3	174	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGCTCATTCATTCAT	NA	False	NA	NA	False	AGTAAA	-19	NA	3882384	3865411	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_3867807_3881764
transcript_201941.known	chrX	-	5865	6	FSM	ENSG00000146938.16	ENST00000381093.6	5865	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	38.4884398228871	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATTATGCGTCCATTC	NA	False	NA	NA	False	AATAAA	-30	NA	6227203	5890031	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_5893667_5903076_5903867_5909053_5909240_6029279_6029433_6150994_6151772_6226879
transcript_201942.known	chrX	-	5858	6	FSM	ENSG00000146938.16	ENST00000381095.8	5858	6	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_5	11.8220133649053	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTTGTGCAAATAATTAT	NA	False	NA	95	True	AATAAA	-20	NA	6228867	5890041	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_5893667_5903076_5903867_5909053_5909240_6029279_6029433_6150994_6151772_6228540
transcript_201947.known	chrX	-	5454	6	FSM	ENSG00000146938.16	ENST00000275857.10	5454	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	45.8589140734928	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAGAAAAAAGAAAA	NA	False	NA	NA	False	AATATA	-13	NA	6227847	5890277	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_5893667_5903076_5903867_5909053_5909240_6029279_6029433_6150994_6151772_6227688
transcript_201955.nnic	chrX	-	3682	6	NNC	ENSG00000146938.16	novel	5865	6	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_5	43.5228675525867	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAAAATGTATATA	NA	False	NA	NA	False	NA	NA	NA	6227178	5892203	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_5893667_5903076_5903867_5909053_5909240_6029279_6029433_6150994_6151772_6226865
transcript_201962.nnic	chrX	-	2053	4	NNC	ENSG00000146938.16	novel	894	2	NA	NA	-3	-43114	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	51.0968579160098	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATTTCTTTCCTTAAT	NA	False	NA	NA	False	AATAAA	-23	NA	6228870	5935318	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_5936112_6029279_6029433_6150994_6151772_6228540
transcript_201965.known	chrX	-	1334	5	FSM	ENSG00000130021.15	ENST00000424830.6	1334	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	58.0834528932294	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATATCTATCGTCTGCAT	NA	False	NA	NA	False	NA	NA	NA	7148158	7049762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_7050473_7077219_7077450_7105619_7105839_7116965_7117035_7148052
transcript_201967.known	chrX	-	2103	4	FSM	ENSG00000130021.15	ENST00000381077.10	2103	4	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	16.739839372653	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTTGTATGAGAGTCAT	NA	False	NA	-3	True	AATAAA	-18	NA	7148153	7048919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_7050473_7077219_7077450_7105619_7105839_7148052
transcript_201968.known	chrX	-	1376	4	FSM	ENSG00000130021.15	ENST00000412827.6	1376	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	54.3507129668048	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTACCTGGTATCTAC	NA	False	NA	NA	False	NA	NA	NA	7148153	7049517	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_7050473_7077219_7077450_7105748_7105839_7148052
transcript_201969.known	chrX	+	6622	11	FSM	ENSG00000101846.9	ENST00000674429.1	6622	11	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_8	2.20227155455452	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTACTTTGTTGAGTAT	7147575	True	NA	NA	False	AATAAA	-19	NA	7147711	7354641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_7148084_7190879_7191009_7253195_7253337_7257241_7257364_7257465_7257589_7259348_7259773_7275950_7276088_7305045_7305184_7325338_7325499_7333985_7334108_7349887
transcript_201972.known	chrX	-	3342	7	FSM	ENSG00000006757.12	ENST00000381042.9	3342	7	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_6	17.1634301156072	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCTTCTTTTCAATAAG	NA	False	NA	-5	True	ATTAAA	-17	NA	7927413	7898246	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_7900818_7901988_7902142_7912027_7912094_7921712_7921849_7922003_7922099_7925939_7926133_7927285
transcript_201973.known	chrX	-	2752	7	FSM	ENSG00000006757.12	ENST00000444736.5	2752	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_6	51.0547092179882	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGGGGTACGTGTACAGG	NA	False	NA	NA	False	NA	NA	NA	7927739	7898762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_7900818_7901988_7902142_7912027_7912094_7921712_7921849_7922003_7922099_7925939_7926133_7927685
transcript_201977.known	chrX	-	6265	14	FSM	ENSG00000011201.12	ENST00000262648.8	6265	14	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_2	39.7127258157379	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGGAGTCGACTCATTTA	NA	False	NA	-2	True	AATAAA	-17	NA	8732137	8528873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_8533054_8534318_8534461_8535590_8535812_8536770_8536943_8539663_8539759_8553951_8554099_8568231_8568377_8570498_8570705_8585266_8585397_8587793_8587979_8597033_8597257_8623607_8623671_8699697_8699746_8731829
transcript_201983.nic	chrX	-	1794	9	NIC	ENSG00000011201.12	novel	704	3	NA	NA	-79	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	63.4606177089382	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGGATTTTCGCCCATA	NA	False	NA	-2	True	AATAAA	-15	NA	8732216	8565805	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_8566213_8568231_8568377_8570498_8570705_8585266_8585397_8587793_8587979_8597033_8597257_8623607_8623671_8699697_8699746_8731829
transcript_201992.known	chrX	-	1645	9	FSM	ENSG00000101850.13	ENST00000467482.6	1645	9	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_7	25.3068666570953	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTGCTTAATGATGGGG	NA	False	NA	57	True	AATAAA	-15	NA	9765847	9725345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_9725841_9739484_9739720_9741337_9741456_9743564_9743674_9746043_9746154_9748573_9748667_9759331_9759427_9760716_9760827_9765567
transcript_201993.nic	chrX	-	1370	9	NIC	ENSG00000101850.13	novel	1645	9	NA	NA	-19	-70	combination_of_known_junctions	FALSE	canonical	3	29	junction_8	41.5645206275737	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTCTCAGCCTGACTTG	NA	False	NA	-13	True	AATAAA	-12	NA	9786316	9725415	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_9725841_9739484_9739720_9741337_9741456_9743564_9743674_9746043_9746154_9748573_9748667_9759331_9759427_9760716_9760827_9786241
transcript_201999.known	chrX	+	7474	10	FSM	ENSG00000146950.13	ENST00000380913.8	7474	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	9.3465514865836	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGATGTCTTTGATTTAC	9784675	True	NA	11	True	AATAAA	-20	NA	9786428	9949443	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_9786711_9873651_9873804_9890976_9891109_9894357_9896699_9898189_9898291_9932174_9932871_9937133_9937686_9939194_9939367_9944640_9944914_9946670
transcript_202.known	SIRV6	+	1088	9	FSM	SIRV6A	SIRV605	1088	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	9760.22235834691	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAGCAATCAACTCAC	NA	False	NA	NA	False	NA	NA	NA	1130	11331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11031
transcript_2020.known	chr1	-	1632	10	FSM	ENSG00000215788.11	ENST00000377782.7	1632	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	42.3083916026124	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCTTCTTGGCGTTTCTGC	-6466165	False	773	NA	False	ATTAAA	-31	NA	6466175	6461150	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6461763_6461993_6462175_6462628_6462667_6462862_6462971_6463064_6463148_6464374_6464454_6464551_6464720_6465087_6465223_6465439_6465561_6466068
transcript_202002.known	chrX	+	4615	6	FSM	ENSG00000146950.13	ENST00000418909.6	4615	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	16.8475517509222	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGAGATGTCTTTGATTT	NA	False	NA	9	True	AATAAA	-18	NA	9912433	9949441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_9912588_9932174_9932871_9937133_9937686_9939194_9939367_9944643_9944914_9946670
transcript_202003.nnic	chrX	+	3940	24	NNC	ENSG00000047644.20	novel	6949	24	NA	NA	-176	-2840	intron_retention	FALSE	non_canonical	0	0	junction_1	25.7317850858642	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACGTATATCTATACATATA	10015063	False	NA	NA	False	AATATA	-27	NA	10015077	10141634	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_10015319_10015665_10015859_10063444_10063555_10067286_10067491_10078798_10078876_10079724_10079805_10090770_10090901_10094131_10094282_10098505_10098580_10109777_10110021_10116417_10116508_10117123_10117690_10122618_10122740_10124264_10124340_10125023_10125111_10126113_10126307_10127987_10128162_10128556_10128709_10129955_10130122_10134431_10134597_10136632_10136726_10138708_10138937_10139412_10139541_10141434
transcript_202008.known	chrX	+	6759	13	FSM	ENSG00000073464.13	ENST00000380833.9	6759	13	0	0	0	0	multi-exon	TRUE	canonical	3	6	junction_1	6.86122357082823	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAGAGATACTGATTTCA	10156891	True	NA	NA	False	AATAAA	-32	NA	10156974	10237660	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_10157101_10158288_10158552_10185021_10185177_10187514_10187615_10194910_10195099_10197938_10198062_10206357_10206565_10206695_10206777_10208044_10208591_10212466_10212654_10213680_10214080_10220660_10220878_10233493
transcript_202013.known	chrX	+	3581	13	FSM	ENSG00000073464.13	ENST00000421085.7	3581	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	10.9797793946671	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAATTTGGGCACTGGGC	10158235	True	NA	NA	False	ATTAAA	-9	NA	10158477	10234773	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_10158552_10185021_10185177_10187514_10187615_10194910_10195099_10195702_10195727_10197938_10198062_10206357_10206565_10206695_10206777_10208044_10208591_10212466_10212654_10213680_10214080_10220660_10220878_10233493
transcript_202016.nic	chrX	-	3791	11	NIC	ENSG00000101871.17	novel	2369	10	NA	NA	-16	-2	combination_of_known_junctions	FALSE	canonical	1	4	junction_7	63.7278589001702	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAACTCGTTATTCAGGA	NA	False	NA	NA	False	AATAGA	-30	NA	10620607	10448107	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_10449717_10454869_10455078_10459645_10459808_10469696_10469841_10474622_10474751_10482479_10482629_10495583_10495692_10501406_10501560_10523091_10523188_10566887_10567604_10620289
transcript_202023.known	chrX	-	6168	10	FSM	ENSG00000101871.17	ENST00000317552.9	6168	10	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_2	16.7913852103973	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTGTCTCTGCCTGTCT	NA	False	NA	-1	True	AATAAA	-22	NA	10620585	10445555	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_10449717_10454869_10455078_10459645_10459808_10469696_10469841_10474622_10474751_10482479_10482629_10495583_10495692_10523091_10523188_10566887_10567604_10620289
transcript_202024.nic	chrX	-	3524	10	FSM	ENSG00000101871.17	ENST00000690004.1	3473	10	-22	-29	-16	-2	multi-exon	FALSE	canonical	3	16	junction_8	48.3982960622416	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAACTCGTTATTCAGGA	NA	False	NA	NA	False	AATAGA	-30	NA	10620607	10448107	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_10449717_10454869_10455078_10459645_10459808_10469696_10469841_10474622_10474751_10482479_10482629_10495583_10495692_10523091_10523188_10567001_10567604_10620289
transcript_20203.known	chr1	+	1947	13	FSM	ENSG00000143801.18	ENST00000422240.6	1947	13	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_10	29.3838343689557	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACAGCAGGTTTATCCAG	226869384	True	NA	95	True	NA	NA	NA	226870619	226895803	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_226870650_226871261_226871405_226875364_226875551_226881887_226882049_226883704_226883920_226885537_226885680_226888090_226888159_226888828_226889050_226890034_226890134_226891277_226891362_226891745_226891845_226894006_226894126_226895423
transcript_202032.nic	chrX	-	2091	7	ISM	ENSG00000101871.17	ENST00000380782.6	3352	10	-188	21159	-16	-1	5prime_fragment	FALSE	canonical	3	138	junction_5	13.8403596613511	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAATACAAAAAAAATA	NA	False	NA	NA	False	TATAAA	-32	NA	10620607	10469264	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_10469841_10474622_10474751_10482479_10482629_10495583_10495692_10523091_10523188_10566887_10567604_10620289
transcript_202036.known	chrX	-	1071	4	FSM	ENSG00000234129.9	ENST00000433747.6	1071	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTGAAAAAAATTAAAATTT	NA	False	NA	NA	False	TTTAAA	-20	NA	11111114	10969890	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_10970539_11055935_11056037_11106900_11106991_11110882
transcript_202037.known	chrX	-	3883	13	FSM	ENSG00000047648.23	ENST00000380736.5	3883	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.11803398874989	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGTTTCCTGGCTTTAA	NA	False	NA	NA	False	AATAAA	-14	NA	11427773	11137542	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_11139531_11142232_11142314_11143979_11144249_11156528_11156627_11169504_11169685_11178099_11178249_11179301_11179453_11182062_11182119_11186235_11186432_11188727_11188985_11196924_11196997_11254547_11254708_11427547
transcript_202039.known	chrX	+	2312	7	FSM	ENSG00000004961.15	ENST00000380762.5	2312	7	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_4	22.341416447685	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTGGAATAATTTTACA	11105707	True	NA	31	True	AATAAA	-27	NA	11111331	11123086	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_11111519_11112018_11112161_11114834_11114987_11117266_11117416_11118500_11118621_11120906_11120994_11121611
transcript_202041.known	chrX	+	1000	7	FSM	ENSG00000004961.15	ENST00000380763.7	1000	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	129.344071719151	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATTGCACTCATGATGT	11105717	True	NA	29	True	ATTAAA	-15	NA	11111341	11121879	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_11111424_11112018_11112161_11114834_11114987_11117266_11117416_11118500_11118621_11120906_11120994_11121611
transcript_202043.known	chrX	+	2277	7	FSM	ENSG00000004961.15	ENST00000321143.8	2277	7	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	112.466291246163	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAAAATTTTTTGGAATA	11105676	True	NA	23	True	AATAAA	-19	NA	11111300	11123078	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_11111461_11112018_11112161_11114834_11114987_11117266_11117416_11118500_11118621_11120906_11120994_11121611
transcript_20205.known	chr1	+	2193	12	FSM	ENSG00000143801.18	ENST00000678320.1	2193	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	37.661388254939	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGTTAGAATCTTGGAG	226869325	True	NA	8	True	AATAAA	-8	NA	226870560	226896086	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_226870650_226871261_226871405_226875364_226875551_226881887_226882049_226883704_226883920_226885537_226885680_226888090_226888159_226888828_226889050_226891277_226891362_226891742_226891845_226894006_226894126_226895423
transcript_202050.known	chrX	+	2286	13	FSM	ENSG00000005302.19	ENST00000312196.10	2286	13	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	18.1680045378927	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGCCTTGTCCTCTTTA	11757876	True	NA	26	True	AATAAA	-40	NA	11758236	11775772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_11758366_11759792_11759876_11760402_11760499_11760836_11760938_11761499_11761583_11762129_11762253_11762836_11762998_11763779_11763939_11765466_11765730_11768572_11768683_11772155_11772256_11772620_11772706_11774979
transcript_202051.known	chrX	+	2329	13	FSM	ENSG00000005302.19	ENST00000398527.7	2329	13	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	21.1830645144234	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAAGCCTGTCTTGTTT	11758531	False	NA	-20	True	NA	NA	NA	11758555	11775726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_11758774_11759792_11759876_11760402_11760499_11760836_11760938_11761499_11761583_11762129_11762253_11762836_11762998_11763779_11763939_11765466_11765730_11768572_11768683_11772155_11772256_11772620_11772706_11774979
transcript_202052.known	chrX	+	2230	13	FSM	ENSG00000005302.19	ENST00000649602.1	2230	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	20.3401627875055	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTTGTTTGAAAGAACCA	11759314	True	NA	-10	True	AATAAA	-4	NA	11759603	11775736	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_11759713_11759792_11759876_11760402_11760499_11760836_11760938_11761499_11761583_11762129_11762253_11762836_11762998_11763779_11763939_11765466_11765730_11768572_11768683_11772155_11772256_11772620_11772706_11774979
transcript_202055.known	chrX	+	1646	12	FSM	ENSG00000005302.19	ENST00000468149.5	1646	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	25.8188220151101	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTGTTAGGAATGATTC	11757892	False	NA	NA	False	GGGGCT	-31	NA	11758252	11775231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_11758366_11759792_11759876_11760402_11760499_11760836_11760938_11762129_11762253_11762836_11762998_11763779_11763939_11765466_11765730_11768572_11768683_11772155_11772256_11772620_11772706_11774979
transcript_202056.known	chrX	+	3480	9	FSM	ENSG00000005302.19	ENST00000337339.7	3480	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	20.7469877331626	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTGTACTTTTTATTT	11757842	True	NA	6	True	AATAAA	-19	NA	11758202	11767977	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_11758366_11759792_11759876_11760402_11760499_11760836_11760938_11761499_11761583_11762129_11762253_11762836_11762998_11763779_11763939_11765466
transcript_202062.known	chrX	+	2296	12	FSM	ENSG00000005302.19	ENST00000649785.1	2296	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	24.340219411331	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGAGAGAGAGTTTTCAC	11759343	True	NA	7	True	AATAAA	-21	NA	11759632	11775753	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_11759876_11760402_11760499_11760836_11760938_11761499_11761583_11762129_11762253_11762836_11762998_11763779_11763939_11765466_11765730_11768574_11768683_11772155_11772256_11772620_11772706_11774979
transcript_202066.known	chrX	+	2469	7	FSM	ENSG00000101911.13	ENST00000380668.10	2469	7	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_2	16.0692943909253	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTGTATGTATCATTGT	12786150	True	NA	9	True	AATAAA	-20	NA	12791411	12824222	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_12791620_12799206_12799391_12809233_12809333_12810021_12810147_12819506_12819681_12820643_12820804_12822703
transcript_20207.known	chr1	+	2144	12	FSM	ENSG00000143801.18	ENST00000677414.1	2144	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	35.4011252564306	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTAGAATCTTGGAGTT	226869332	True	NA	10	True	AATAAA	-10	NA	226870567	226896088	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_226870650_226875364_226875551_226881887_226882049_226883704_226883920_226885537_226885680_226888090_226888159_226888828_226889050_226890034_226890134_226891277_226891362_226891742_226891845_226894006_226894126_226895423
transcript_202071.known	chrX	+	763	4	FSM	ENSG00000101911.13	ENST00000489404.5	763	4	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_2	14.8996644257513	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATATATTGGTTTATTTG	12786226	True	NA	NA	False	AATACA	-20	NA	12791487	12810369	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_12791620_12799206_12799391_12809233_12809333_12810021
transcript_202074.known	chrX	+	767	3	FSM	ENSG00000205542.11	ENST00000380635.5	767	3	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	19303.5	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTGTGTCTGTTTGGTT	12975209	False	NA	27	True	AATAAA	-16	NA	12975243	12977227	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_12975444_12976245_12976362_12976776
transcript_202075.known	chrX	+	622	3	FSM	ENSG00000205542.11	ENST00000451311.7	622	3	0	0	0	0	multi-exon	FALSE	canonical	3	37669	junction_1	535	25899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTAGCTGGTGTGTCTGTTT	12746358	True	NA	23	True	AATAAA	-12	NA	12975109	12977223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_12975169_12976245_12976362_12976776
transcript_202076.known	chrX	+	1702	2	FSM	ENSG00000205542.11	ENST00000380636.1	1702	2	0	0	0	0	multi-exon	FALSE	canonical	3	38739	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGGTGTGTCTGTTTGGT	12746358	True	NA	26	True	AATAAA	-15	NA	12975109	12977226	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_12976362_12976776
transcript_202077.known	chrX	+	2385	12	FSM	ENSG00000198759.12	ENST00000380602.3	2385	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.56808125305919	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGTCATGGTTTAATT	13569569	True	NA	NA	False	TTTAAA	-31	NA	13569621	13633575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_13569936_13589555_13589669_13594835_13594929_13599974_13600095_13603316_13603437_13606378_13606514_13608323_13608447_13617729_13618054_13619162_13619244_13623820_13623926_13627010_13627277_13632984
transcript_202078.known	chrX	+	2403	12	FSM	ENSG00000198759.12	ENST00000361306.6	2403	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.44273251682626	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGTCATGGTTTAATT	13569548	True	NA	NA	False	TTTAAA	-31	NA	13569600	13633575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_13569936_13589555_13589669_13594835_13594929_13599974_13600095_13603316_13603437_13606378_13606514_13608323_13608447_13617729_13618054_13619162_13619244_13623823_13623926_13627010_13627277_13632984
transcript_202085.known	chrX	+	2034	3	FSM	ENSG00000123595.8	ENST00000464506.2	2034	3	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	2.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTGTGTGGTTGGTGAC	13685435	True	NA	NA	False	GATAAA	-32	NA	13689127	13710504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_13689289_13703813_13703903_13708720
transcript_202087.known	chrX	+	393	3	FSM	ENSG00000123595.8	ENST00000243325.6	393	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	56	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACAGATATGTAACTAATA	13685468	True	NA	NA	False	TTTAAA	-45	NA	13689160	13708817	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_13689289_13703734_13703903_13708720
transcript_202089.known	chrX	+	737	2	FSM	ENSG00000123595.8	ENST00000618931.2	737	2	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGATTGTTGATGCATTC	13685493	True	NA	NA	False	NA	NA	NA	13689185	13709354	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_13689289_13708720
transcript_202092.known	chrX	-	2842	6	FSM	ENSG00000196459.15	ENST00000380579.6	2842	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	45.980865585589	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCGTGGTAGTTTAATATC	NA	False	NA	-12	True	AATAAA	-14	NA	13734620	13712244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_13714506_13716003_13716090_13716533_13716679_13719870_13719983_13734043_13734186_13734524
transcript_202094.known	chrX	-	2716	5	FSM	ENSG00000196459.15	ENST00000359680.9	2716	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	45.8114341622264	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGTGGTAGTTTAATATCC	NA	False	NA	-11	True	AATAAA	-15	NA	13734635	13712243	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_13714506_13716003_13716090_13716533_13716679_13719870_13719983_13734524
transcript_202097.known	chrX	-	561	4	FSM	ENSG00000196459.15	ENST00000519885.5	561	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	52.8667087011182	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTGAATATGTATTTAGG	NA	False	NA	NA	False	NA	NA	NA	13734575	13715836	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_13716090_13716533_13716679_13719870_13719983_13734524
transcript_202106.nic	chrX	-	3087	7	NIC	ENSG00000046653.15	novel	3118	8	NA	NA	-207	0	combination_of_known_junctions	FALSE	canonical	3	518	junction_1	103.932135977708	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCCTTTTTACCATACAT	NA	False	NA	-6	True	AATAAA	-17	NA	13938845	13770938	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_13773031_13776237_13776304_13777351_13777426_13779817_13779990_13783364_13783522_13785621_13785809_13938506
transcript_202108.nic	chrX	-	3128	7	NIC	ENSG00000046653.15	novel	3957	7	NA	NA	-338	-90	combination_of_known_junctions	FALSE	canonical	3	518	junction_1	103.932135977708	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTGTATGCTTATTTT	NA	False	NA	0	True	AATAAA	-21	NA	13938976	13771028	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_13773031_13776237_13776304_13777351_13777426_13779817_13779990_13783364_13783522_13785621_13785809_13938506
transcript_20211.known	chr1	+	2465	13	FSM	ENSG00000143801.18	ENST00000366782.6	2465	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	45.496336848879	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGAGTTTGGTCCGTTG	226870032	False	NA	20	True	AATAAA	-20	NA	226871267	226896098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_226871405_226875364_226875551_226880468_226880725_226881887_226882049_226883704_226883920_226885537_226885680_226888090_226888159_226888828_226889050_226890034_226890134_226891277_226891362_226891742_226891845_226894006_226894126_226895423
transcript_202110.nic	chrX	-	2606	7	NIC	ENSG00000046653.15	novel	3957	7	NA	NA	-243	0	combination_of_known_junctions	FALSE	canonical	3	518	junction_1	103.932135977708	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCATTTGGATTCTCTT	NA	False	NA	-6	True	ATTAAA	-19	NA	13938881	13771455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_13773031_13776237_13776304_13777351_13777426_13779817_13779990_13783364_13783522_13785621_13785809_13938506
transcript_202111.known	chrX	-	3957	7	FSM	ENSG00000046653.15	ENST00000454189.6	3957	7	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_1	170.581765991822	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCATTTGGATTCTCTT	NA	False	NA	-6	True	ATTAAA	-19	NA	13938638	13771455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_13774625_13776237_13776304_13777351_13777426_13779817_13779990_13783364_13783522_13785621_13785809_13938506
transcript_202113.known	chrX	-	1033	7	FSM	ENSG00000046653.15	ENST00000398361.7	1033	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_6	306.035083319253	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGATTCAGTTATTTAC	NA	False	NA	NA	False	NA	NA	NA	13938415	13774336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_13774625_13776237_13776304_13777351_13777426_13779817_13779990_13783364_13783522_13785621_13785809_13938326
transcript_202120.known	chrX	+	3612	23	FSM	ENSG00000046651.16	ENST00000340096.11	3612	23	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_10	25.7369480682494	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTTTTGTCTTAAATTT	13732866	True	NA	7	True	AATAAA	-21	NA	13734747	13769357	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_13735084_13735247_13735347_13736477_13736679_13738845_13738915_13739001_13739033_13744414_13744520_13746318_13746456_13746779_13746954_13749426_13749534_13751248_13751369_13753367_13753442_13755150_13755243_13756577_13756768_13757659_13757791_13758336_13758449_13760114_13760721_13761084_13761212_13762343_13762445_13763744_13763856_13767126_13767285_13768053_13768225_13768717_13768786_13769065
transcript_202142.nic	chrX	+	1114	8	ISM	ENSG00000046651.16	ENST00000340096.11	3612	23	-80	22522	-75	-7118	5prime_fragment	FALSE	canonical	3	79	junction_5	8.70139561876632	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATGAAAAGGAGTTAACCA	NA	False	NA	NA	False	ATTAAA	-18	NA	13734667	13746835	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_13735084_13735247_13735347_13736477_13736679_13738845_13738915_13739001_13739033_13744414_13744520_13746318_13746456_13746779
transcript_202153.known	chrX	-	3147	5	FSM	ENSG00000046647.14	ENST00000680255.1	3147	5	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_4	22.0737400546441	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCTGTCTTTAAAAATCA	NA	False	NA	-19	True	AATAAA	-15	NA	14029892	14006725	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_14009170_14020077_14020535_14021463_14021512_14026139_14026222_14029776
transcript_202155.known	chrX	-	1682	5	FSM	ENSG00000046647.14	ENST00000380523.8	1682	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	46.4831958884068	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCCGGGCGCAATGGTTC	NA	False	NA	NA	False	AATAAA	-20	NA	14029892	14008278	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_14009170_14020077_14020535_14021463_14021512_14026051_14026222_14029776
transcript_202159.known	chrX	-	1119	4	FSM	ENSG00000046647.14	ENST00000398355.7	1119	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	33.0286071291069	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGGTTTTTTATGTTG	NA	False	NA	-14	True	CATAAA	-17	NA	14029893	14008672	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_14009170_14020077_14020535_14021463_14021512_14029776
transcript_202170.known	chrX	-	2712	10	FSM	ENSG00000181544.15	ENST00000452869.1	2712	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	19.8463231660143	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAGAAAATGTTGCA	NA	False	NA	NA	False	NA	NA	NA	14873052	14843692	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_14843982_14844502_14844741_14844855_14845287_14850504_14850675_14853038_14853168_14857861_14857955_14859181_14859335_14864559_14865581_14868922_14869044_14872985
transcript_202171.known	chrX	-	2894	9	FSM	ENSG00000181544.15	ENST00000324138.7	2894	9	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_8	11.146748404804	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAGGGCCATTTTATCTC	NA	False	NA	-2	True	AATAAA	-15	NA	14873069	14843406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_14843982_14844502_14844741_14844855_14845287_14850504_14850675_14853038_14853168_14857861_14857955_14859181_14859335_14864559_14865581_14872985
transcript_202173.nic	chrX	-	577	3	ISM	ENSG00000181544.15	ENST00000452869.1	2712	10	-17	21516	0	134	5prime_fragment	FALSE	canonical	3	66	junction_2	12.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAATGTTTTTGAATATT	NA	False	NA	-18	True	AATAAA	-3	NA	14873069	14865208	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_14865581_14868922_14869044_14872985
transcript_202175.known	chrX	+	4183	15	FSM	ENSG00000130150.12	ENST00000380492.8	4183	15	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_9	9.23861682376353	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTGGTCTCTAATTGATA	14872289	True	NA	NA	False	AATAAA	-18	NA	14873420	14922327	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_14873538_14873688_14873759_14892722_14892879_14895307_14895395_14897083_14897239_14900574_14900636_14902965_14903005_14908859_14908985_14911236_14911414_14912248_14912362_14914502_14914600_14915667_14915765_14916196_14916327_14918679_14918783_14919671
transcript_202177.nic	chrX	+	970	10	ISM	ENSG00000130150.12	ENST00000482354.5	1870	15	28	9463	-8	-3295	5prime_fragment	FALSE	canonical	3	50	junction_9	10.3434836646551	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGATTCAAAAGTGAAAGC	14872351	True	NA	NA	False	AAGAAA	-9	NA	14873482	14912293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_14873538_14873688_14873759_14892722_14892879_14895307_14895395_14897083_14897239_14900574_14900636_14902965_14903005_14908859_14908985_14911236_14911414_14912248
transcript_202179.known	chrX	-	1947	8	FSM	ENSG00000102048.16	ENST00000546332.1	1947	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.27775312999988	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTTTTAAGCTTCCCT	NA	False	NA	NA	False	AATAAA	-24	NA	15270467	15243988	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_15244631_15248682_15248936_15250429_15250565_15252253_15252405_15254736_15254845_15258865_15258946_15269780_15270010_15270118
transcript_202182.known	chrX	-	2113	7	FSM	ENSG00000165195.16	ENST00000637296.1	2113	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	14.8033404638578	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCATGGGTTTTTTAACC	NA	False	NA	NA	False	NA	NA	NA	15335523	15320358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_15321773_15324664_15324872_15325019_15325153_15325913_15326047_15331215_15331300_15331873_15331993_15335500
transcript_202183.known	chrX	-	3590	6	FSM	ENSG00000165195.16	ENST00000333590.6	3590	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	9.26498785752038	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGAGTTTGTCTTATT	NA	False	NA	-5	True	AATAAA	-23	NA	15335523	15319455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_15321773_15324664_15324872_15325019_15325153_15325913_15326047_15331215_15331993_15335500
transcript_202184.known	chrX	-	3246	6	FSM	ENSG00000165195.16	ENST00000635598.1	3246	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	14.4968962195361	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTGAGTTTGTCTTAT	NA	False	NA	-6	True	AATAAA	-22	NA	15335554	15319456	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_15321773_15324664_15324872_15325019_15325153_15325913_15326047_15331589_15331993_15335500
transcript_202185.known	chrX	-	2963	6	FSM	ENSG00000165195.16	ENST00000638131.1	2963	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	15.2656477098091	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGCTACATGTCCAAAAATA	NA	False	NA	-49	True	NA	NA	NA	15335544	15319499	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_15321773_15324664_15324872_15325019_15325153_15325913_15326047_15331819_15331993_15335500
transcript_202186.known	chrX	-	854	6	FSM	ENSG00000165195.16	ENST00000634640.1	854	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	12.214745187682	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACTATTCTCACAGTAAA	NA	False	NA	NA	False	AATAGA	-30	NA	15335554	15321564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_15321773_15324664_15324872_15325019_15325153_15325913_15326047_15331873_15331993_15335500
transcript_202187.known	chrX	-	1539	10	FSM	ENSG00000087842.11	ENST00000380421.3	1539	10	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_9	54.3073102870809	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTTTTTCATTTGAGA	NA	False	NA	0	True	AATAAA	-24	NA	15493564	15384798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_15385117_15390184_15390252_15397448_15397532_15407505_15407551_15425905_15425991_15455847_15456055_15459656_15459741_15479728_15479822_15491161_15491310_15493155
transcript_202188.known	chrX	-	1274	10	FSM	ENSG00000087842.11	ENST00000380420.10	1274	10	0	0	0	0	multi-exon	TRUE	canonical	3	160	junction_7	17.0453280953035	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTTTTTCATTTGAGA	NA	False	NA	0	True	AATAAA	-24	NA	15493333	15384798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_15385117_15390184_15390252_15397448_15397532_15407505_15407551_15425905_15425991_15455847_15456055_15459656_15459741_15479728_15479822_15491161_15491310_15493189
transcript_20220.known	chr1	+	2866	15	FSM	ENSG00000163050.18	ENST00000366777.4	2866	15	0	0	0	0	multi-exon	TRUE	canonical	3	212	junction_7	25.431781498827	419	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCGCGTGTACCCTCTT	226936860	True	NA	22	True	AATAAA	-19	NA	226940293	226987544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_226940400_226961376_226961563_226964999_226965411_226965670_226965738_226977448_226977524_226982026_226982150_226982677_226982764_226982893_226983035_226983551_226983634_226983760_226983855_226984093_226984236_226984547_226984656_226984875_226984942_226985253_226985341_226986452
transcript_202207.known	chrX	+	1264	4	FSM	ENSG00000186312.10	ENST00000380334.6	1264	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	39.1946708395698	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTGTCTTTATTATCATA	15674885	False	NA	NA	False	AATAAA	-21	NA	15675545	15703724	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_15675573_15688660_15688859_15692962_15693059_15702781
transcript_202209.known	chrX	-	1352	6	FSM	ENSG00000147003.7	ENST00000380342.4	1352	6	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_5	4.84148737476408	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGATTGTGGTCTGGAA	NA	False	NA	-2	True	AATAAA	-27	NA	15664805	15627317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_15628128_15639561_15639757_15644915_15645030_15659015_15659102_15664336_15664396_15664717
transcript_202211.known	chrX	+	1479	11	FSM	ENSG00000169249.14	ENST00000307771.8	1479	11	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	24.174573419194	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGTATATCTTATTTAT	15788186	True	NA	18	True	AATAAA	-18	NA	15790483	15823260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_15790537_15790933_15791014_15799871_15799954_15803687_15803797_15804110_15804198_15808232_15808272_15809199_15809319_15815676_15815891_15818586_15818643_15820206_15820317_15822730
transcript_202218.known	chrX	-	1946	6	FSM	ENSG00000182287.15	ENST00000479184.2	1946	6	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	551.338153949099	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTTTAATGCTACATAAAT	NA	False	NA	NA	False	AATATA	-11	NA	15854789	15830231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_15831569_15833443_15833525_15845378_15845517_15845902_15846012_15852345_15852525_15854687
transcript_202222.known	chrX	-	2365	6	FSM	ENSG00000182287.15	ENST00000673591.1	2365	6	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	564.576159610021	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGACAAAATATGACCTAGAA	NA	False	NA	NA	False	NA	NA	NA	15854827	15831289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_15833008_15833443_15833525_15845378_15845517_15845902_15846012_15852345_15852525_15854687
transcript_202223.known	chrX	-	2237	5	FSM	ENSG00000182287.15	ENST00000329235.6	2237	5	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_1	470.899405393551	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTTGACTTTTCTACTC	NA	False	NA	1	True	AATAAA	-21	NA	15854931	15825805	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_15827373_15845378_15845517_15845902_15846012_15852345_15852525_15854687
transcript_202227.known	chrX	-	1925	5	FSM	ENSG00000182287.15	ENST00000450644.2	1925	5	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_1	419.100823191747	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATACAGCTGCTTGCTTT	NA	False	NA	-93	True	NA	NA	NA	15854755	15830137	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_15831569_15845378_15845517_15845902_15846012_15852345_15852525_15854687
transcript_202228.known	chrX	-	3492	5	FSM	ENSG00000182287.15	ENST00000380291.5	3492	5	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_1	479.83818887204	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCGTCTCATGTGAATGAC	NA	False	NA	-14	True	AATAAA	-14	NA	15854804	15830058	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_15833008_15845378_15845517_15845902_15846012_15852345_15852525_15854687
transcript_202235.known	chrX	+	2417	3	FSM	ENSG00000126010.6	ENST00000380289.3	2417	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACAGTATTTATTCTTG	16123245	True	NA	NA	False	TATAAA	-7	NA	16123564	16153518	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_16124367_16150304_16150657_16152255
transcript_202236.known	chrX	+	1434	2	FSM	ENSG00000182798.10	ENST00000400004.6	1434	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGCCCAAGACGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	16167480	16171464	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_16167784_16170333
transcript_202242.known	chrX	-	3953	19	FSM	ENSG00000047230.15	ENST00000359276.9	3953	19	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_18	24.2207568364078	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTCACCTTTTGGTTA	NA	False	NA	NA	False	AATAAA	-26	NA	16712669	16587998	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_16589776_16590751_16590863_16609540_16609686_16617149_16617247_16620276_16620333_16639146_16639244_16667513_16667558_16667661_16667725_16670579_16670675_16678361_16678451_16683093_16683227_16689449_16689602_16691539_16691621_16693140_16693225_16693370_16693488_16698235_16698337_16698922_16699094_16702736_16702942_16712334
transcript_202244.nnic	chrX	-	3789	19	NNC	ENSG00000047230.15	novel	4319	19	NA	NA	-63	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_18	41.0423223297881	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTTGTTTCACCTTTTG	NA	False	NA	NA	False	AATAAA	-22	NA	16712732	16588002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_16589776_16590751_16590863_16609540_16609686_16617149_16617247_16620276_16620333_16639146_16639244_16667513_16667558_16667661_16667725_16670579_16670675_16678361_16678451_16683093_16683227_16689449_16689602_16691539_16691621_16693140_16693225_16693370_16693488_16698235_16698337_16698922_16699094_16702736_16702942_16712557
transcript_202245.known	chrX	-	3526	19	FSM	ENSG00000047230.15	ENST00000380241.7	3526	19	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_18	38.1164962181811	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAATGCTGAATAATTAAT	NA	False	NA	NA	False	NA	NA	NA	16712936	16588305	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_16589776_16590751_16590863_16609540_16609686_16617149_16617247_16620276_16620333_16639146_16639244_16667513_16667558_16667661_16667725_16670579_16670675_16678361_16678451_16683093_16683227_16689449_16689602_16691539_16691621_16693140_16693225_16693370_16693488_16698235_16698337_16698922_16699094_16702736_16702942_16712721
transcript_202249.nnic	chrX	-	2344	19	NNC	ENSG00000047230.15	novel	3953	19	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_18	37.4955141349857	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGGAGAAAGTGTGTTCA	NA	False	NA	-7	True	ATTAAA	-19	NA	16712688	16589548	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_16589776_16590751_16590863_16609540_16609686_16617149_16617247_16620276_16620333_16639146_16639244_16667513_16667558_16667661_16667725_16670579_16670675_16678361_16678451_16683093_16683227_16689449_16689602_16691539_16691621_16693140_16693225_16693370_16693488_16698235_16698337_16698922_16699094_16702736_16702942_16712412
transcript_202250.nnic	chrX	-	2354	19	NNC	ENSG00000047230.15	novel	3526	19	NA	NA	93	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_18	41.0423223297881	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGGAGAAAGTGTGTTCA	NA	False	NA	-7	True	ATTAAA	-19	NA	16712843	16589548	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_16589776_16590751_16590863_16609540_16609686_16617149_16617247_16620276_16620333_16639146_16639244_16667513_16667558_16667661_16667725_16670579_16670675_16678361_16678451_16683093_16683227_16689449_16689602_16691539_16691621_16693140_16693225_16693370_16693488_16698235_16698337_16698922_16699094_16702736_16702942_16712557
transcript_202257.nnic	chrX	-	2417	18	NNC	ENSG00000047230.15	novel	3953	19	NA	NA	-30	7911	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	48.4587364150996	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	3	True	ATTAAA	-22	NA	16712699	16580087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_16580410_16609540_16609686_16617149_16617247_16620276_16620333_16639146_16639244_16667513_16667558_16667661_16667725_16670579_16670675_16678361_16678451_16683093_16683227_16689449_16689602_16691539_16691621_16693140_16693225_16693370_16693488_16698235_16698337_16698922_16699094_16702736_16702942_16712334
transcript_202273.known	chrX	+	6153	9	FSM	ENSG00000169895.6	ENST00000380155.4	6153	9	0	0	0	0	multi-exon	FALSE	canonical	3	587	junction_1	32.7175411667809	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTATAATGGTTGTTCC	16707692	True	NA	13	True	AATAAA	-27	NA	16719611	16765340	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_16719900_16735226_16735346_16736165_16736233_16741715_16741790_16743700_16743841_16754944_16755094_16756662_16756722_16757161_16757310_16760231
transcript_202281.known	chrX	+	604	3	FSM	ENSG00000169895.6	ENST00000495743.1	604	3	0	0	0	0	multi-exon	FALSE	canonical	3	587	junction_1	33	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGGAGTCTTGCTCTGT	16707851	False	NA	NA	False	NA	NA	NA	16719770	16736521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_16719900_16735226_16735346_16736165
transcript_202283.nic	chrX	+	450	2	ISM	ENSG00000169895.6	ENST00000495743.1	604	3	-241	1215	-82	-1215	5prime_fragment	FALSE	canonical	3	587	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCGTAGAAGAAGGAAAAAT	NA	False	NA	NA	False	AATAAA	-5	NA	16719529	16735306	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_16719900_16735226
transcript_202291.known	chrX	-	1904	12	FSM	ENSG00000102054.18	ENST00000404022.5	1904	12	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_9	248.445514255579	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGATTGGCTTTGCAGA	NA	False	NA	88	True	NA	NA	NA	16870361	16844689	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_16845104_16845827_16845939_16849243_16849302_16852045_16852123_16852550_16852629_16852748_16852876_16853681_16853843_16857593_16857710_16858675_16858823_16862954_16863101_16869075_16869221_16870037
transcript_202292.known	chrX	-	2036	12	FSM	ENSG00000102054.18	ENST00000380084.8	2036	12	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_11	238.146770495677	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTGTGTTTTTTTAAA	NA	False	NA	NA	False	AATAAA	-11	NA	16869886	16844653	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_16845104_16845827_16845939_16849243_16849302_16852045_16852123_16852550_16852629_16852748_16852876_16853681_16853843_16857593_16857710_16858675_16858850_16862954_16863101_16869075_16869221_16869493
transcript_202293.known	chrX	-	2281	12	FSM	ENSG00000102054.18	ENST00000380087.7	2281	12	0	0	0	0	multi-exon	FALSE	canonical	3	740	junction_8	69.7395390419604	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAGATATCTGCATCAT	NA	False	NA	-4	True	AATAAA	-20	NA	16870362	16844340	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_16845104_16845827_16845939_16849243_16849302_16852045_16852123_16852550_16852629_16852748_16852876_16853681_16853843_16857593_16857710_16858675_16858850_16862954_16863101_16869075_16869221_16870037
transcript_202300.known	chrX	+	4362	10	FSM	ENSG00000086712.13	ENST00000380122.10	4362	10	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_8	14.7932250092006	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTCTGTGTATTCTTTC	16776619	True	NA	104	True	AGTAAA	-19	NA	16786465	16844519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_16786590_16818573_16818878_16820163_16820256_16828093_16828265_16829575_16829771_16832622_16832743_16834282_16834358_16837592_16837686_16839820_16839917_16841427
transcript_202317.nic	chrX	+	1178	8	ISM	ENSG00000086712.13	ENST00000380122.10	4362	10	-4	6834	-4	-6832	5prime_fragment	FALSE	canonical	3	178	junction_2	11.8062591493682	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTACATATTTTTAGTA	16776615	True	NA	NA	False	AAAAAG	-41	NA	16786461	16837685	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_16786590_16818573_16818878_16820163_16820256_16828093_16828265_16829575_16829771_16832622_16832743_16834282_16834358_16837592
transcript_202334.known	chrX	+	7978	18	FSM	ENSG00000169891.18	ENST00000357277.8	7978	18	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	3.5625891599357	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGGTTTTATGGAGTCT	16946513	True	NA	7	True	AATAAA	-15	NA	16946657	17153272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_16947135_17006220_17006345_17022122_17022272_17025058_17025186_17029525_17029624_17047346_17047483_17052381_17052446_17054807_17054951_17062437_17062533_17068401_17068472_17069939_17069994_17074113_17074160_17077270_17077408_17103717_17103780_17133823_17133908_17135260_17135407_17138855_17138962_17147412
transcript_202335.known	chrX	+	9044	9	FSM	ENSG00000188158.17	ENST00000676302.1	9044	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.99608992783391	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACCGGTTTCTCTCTTCAC	17374912	True	NA	6	True	AATAAA	-17	NA	17375199	17735994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_17376323_17687741_17687895_17692334_17692469_17719343_17719407_17721440_17721634_17724298_17724431_17725346_17728329_17728648_17728776_17731857
transcript_202337.known	chrX	+	8213	9	FSM	ENSG00000188158.17	ENST00000398097.7	8213	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.99608992783391	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTGACTGCAATTAAACAAC	NA	False	NA	-10	True	AATAAA	-1	NA	17635292	17735978	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_17635601_17687741_17687895_17692334_17692469_17719343_17719407_17721440_17721634_17724298_17724431_17725346_17728329_17728648_17728776_17731857
transcript_202338.known	chrX	+	2887	8	FSM	ENSG00000047634.15	ENST00000380041.8	2887	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.95394908975717	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAAGCCTCAGATGTGAT	17737216	True	NA	10	True	AATAAA	-20	NA	17737492	17754985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_17737681_17744070_17744220_17745455_17745540_17746017_17746099_17749399_17749505_17749893_17750294_17751814_17751967_17753257
transcript_202339.known	chrX	+	2679	6	FSM	ENSG00000047634.15	ENST00000380045.7	2679	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	5.0438080851674	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAAGCCTCAGATGTGAT	17737191	True	NA	10	True	AATAAA	-20	NA	17737467	17754985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_17737681_17746017_17746099_17749399_17749505_17749893_17750294_17751814_17751967_17753257
transcript_202341.known	chrX	-	2317	3	FSM	ENSG00000131831.18	ENST00000331511.5	2317	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGTTGCAGTATTTCAT	NA	False	NA	-2	True	AATAAA	-41	NA	17861236	17800050	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_17802035_17837536_17837731_17861097
transcript_202342.known	chrX	-	2187	2	FSM	ENSG00000131831.18	ENST00000451717.6	2187	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTGCAGTATTTCATCA	NA	False	NA	0	True	AATAAA	-43	NA	17861298	17800048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_17802035_17861097
transcript_202343.known	chrX	-	2421	3	FSM	ENSG00000131831.18	ENST00000545871.1	2421	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGTTGCAGTATTTCAT	NA	False	NA	-2	True	AATAAA	-41	NA	17861337	17800050	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_17802035_17837536_17837734_17861097
transcript_202349.known	chrX	-	4162	15	FSM	ENSG00000102098.19	ENST00000251900.9	4162	15	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	17.9433632776658	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAAGCCTCAGATGTGAT	NA	False	NA	-3	True	AATAAA	-19	NA	18354688	18239312	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_18241380_18242438_18242591_18246576_18246829_18247768_18247883_18256847_18257031_18258043_18258248_18260170_18260292_18265584_18265803_18304971_18305216_18320331_18320421_18323858_18324094_18324906_18324978_18330586_18330656_18334049_18334096_18354591
transcript_202352.nic	chrX	-	4019	14	NIC	ENSG00000102098.19	novel	4162	15	NA	NA	-10	0	intron_retention	FALSE	canonical	3	38	junction_1	28.2015149200709	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAAAGCCTCAGATGTGA	NA	False	NA	-4	True	AATAAA	-18	NA	18354698	18239313	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_18241380_18246576_18246829_18247768_18247883_18256847_18257031_18258043_18258248_18260170_18260292_18265584_18265803_18304971_18305216_18320331_18320421_18323858_18324094_18324906_18324978_18330586_18330656_18334049_18334096_18354591
transcript_202357.known	chrX	-	5077	33	FSM	ENSG00000044446.12	ENST00000379942.5	5077	33	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_4	19.1245914989053	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTGGCCAGGAGGTGCG	NA	False	NA	0	True	AATAAA	-21	NA	18984114	18892297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_18893656_18894203_18894405_18895137_18895192_18897162_18897334_18899172_18899227_18900669_18900700_18901484_18901604_18905757_18905860_18906494_18906625_18906735_18906815_18907017_18907098_18907899_18908057_18908800_18908935_18910871_18910961_18918680_18918855_18920031_18920202_18924055_18924135_18924380_18924526_18925667_18925778_18926452_18926588_18929227_18929307_18931640_18931749_18936054_18936151_18938626_18938750_18939994_18940049_18941528_18941676_18943709_18943809_18945077_18945159_18948743_18948827_18951103_18951273_18952493_18952542_18954253_18954413_18983854
transcript_202365.nic	chrX	-	5088	31	NIC	ENSG00000044446.12	novel	5077	33	NA	NA	-541	228	intron_retention	FALSE	canonical	3	52	junction_22	13.0268526087036	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAAGGCTCCTCTTATAGC	NA	False	NA	NA	False	NA	NA	NA	18984655	18892743	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_18893656_18894203_18894405_18895137_18895192_18897162_18897334_18901484_18901604_18905757_18905860_18906494_18906625_18906735_18906815_18907017_18907098_18907899_18908057_18908800_18908935_18910871_18910961_18918680_18918855_18920031_18920202_18924055_18924135_18924380_18924526_18925667_18925778_18926452_18926588_18929227_18929307_18931640_18931749_18936054_18936151_18938626_18938750_18939994_18940049_18941528_18941676_18943709_18943809_18945077_18945159_18948743_18948827_18951103_18951273_18952493_18952542_18954253_18954413_18983854
transcript_202367.nic	chrX	-	4897	31	NIC	ENSG00000044446.12	novel	5077	33	NA	NA	-578	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_22	13.0268526087036	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGGGGTTTTCTTGTGCC	NA	False	NA	-7	True	AATAGA	-21	NA	18984692	18892971	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_18893656_18894203_18894405_18895137_18895192_18897162_18897334_18901484_18901604_18905757_18905860_18906494_18906625_18906735_18906815_18907017_18907098_18907899_18908057_18908800_18908935_18910871_18910961_18918680_18918855_18920031_18920202_18924055_18924135_18924380_18924526_18925667_18925778_18926452_18926588_18929227_18929307_18931640_18931749_18936054_18936151_18938626_18938750_18939994_18940049_18941528_18941676_18943709_18943809_18945077_18945159_18948743_18948827_18951103_18951273_18952493_18952542_18954253_18954413_18983854
transcript_202379.nic	chrX	-	4103	16	NIC	ENSG00000044446.12	novel	5077	33	NA	NA	-874	1116	intron_retention	FALSE	canonical	3	52	junction_7	6.65799435933141	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAATCTCACTGTGTAGC	NA	False	NA	NA	False	NA	NA	NA	18984988	18923047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_18924526_18925667_18925778_18926452_18926588_18929227_18929307_18931640_18931749_18936054_18936151_18938626_18938750_18939994_18940049_18941528_18941676_18943709_18943809_18945077_18945159_18948743_18948827_18951103_18951273_18952493_18952542_18954253_18954413_18983854
transcript_202385.known	chrX	-	4661	29	FSM	ENSG00000173698.18	ENST00000357991.7	4661	29	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_24	6.72908702907742	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTAAGTTTGGTAATTTT	NA	False	NA	-5	True	AATAAA	-14	NA	19122461	18989313	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_18991049_18994895_18995049_18996050_18996153_18998995_18999280_18999860_18999961_19002845_19003115_19004757_19004880_19006001_19006106_19006219_19006266_19007234_19007358_19007979_19008124_19009625_19009783_19010612_19010779_19013685_19014075_19019598_19019666_19021103_19021199_19023415_19023454_19023908_19023949_19027218_19027275_19028182_19028239_19030983_19031038_19033612_19033655_19035941_19035978_19037466_19037491_19037597_19037637_19040188_19040225_19068716_19068836_19082701_19082747_19122441
transcript_202387.known	chrX	-	4779	27	FSM	ENSG00000173698.18	ENST00000379876.5	4779	27	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_23	8.05427226850123	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGGTAATTTTCACAA	NA	False	NA	0	True	AATAAA	-19	NA	19122637	18989308	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_18991049_18994895_18995049_18996050_18996153_18998995_18999280_18999860_18999961_19002845_19003115_19004757_19004880_19006001_19006106_19006219_19006266_19007234_19007358_19007979_19008124_19009625_19009783_19010612_19010779_19013685_19014075_19019598_19019666_19021103_19021199_19023415_19023454_19023908_19023949_19027218_19027275_19028182_19028239_19030983_19031038_19033612_19033655_19035941_19035978_19040188_19040225_19068716_19068836_19082701_19082747_19122441
transcript_202390.known	chrX	-	4698	28	FSM	ENSG00000173698.18	ENST00000379873.6	4698	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	9.6899818162601	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGGTAATTTTCACAA	NA	False	NA	0	True	AATAAA	-19	NA	19122637	18989308	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_18991049_18996050_18996153_18998995_18999280_18999860_18999961_19002845_19003115_19004757_19004880_19006001_19006106_19006219_19006266_19007234_19007358_19007979_19008124_19009625_19009783_19010612_19010779_19013685_19014075_19019598_19019666_19021103_19021199_19023415_19023454_19023908_19023949_19027218_19027275_19028182_19028239_19030983_19031038_19033612_19033655_19035941_19035978_19037466_19037491_19037588_19037637_19040188_19040225_19068716_19068836_19082701_19082747_19122441
transcript_202391.known	chrX	+	2723	3	FSM	ENSG00000286724.1	ENST00000655807.1	2723	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTCACTTAATGCAAACA	18984249	False	NA	NA	False	AATAAA	-6	NA	18984290	19057115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_18984654_19050805_19050982_19054931
transcript_202395.known	chrX	+	3484	12	FSM	ENSG00000131828.14	ENST00000379806.9	3484	12	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	503.779730168777	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACCCTGTATCACTGA	19332115	True	NA	36	True	AATAAA	-38	NA	19343892	19361705	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_19344095_19346509_19346624_19349311_19349372_19349936_19350111_19351280_19351408_19353081_19353174_19354490_19354584_19355348_19355505_19355685_19355758_19357651_19357720_19358915_19359025_19359488
transcript_202396.known	chrX	+	3391	11	FSM	ENSG00000131828.14	ENST00000545074.5	3391	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	401.569782229689	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACCCTGTATCACTGA	19332115	True	NA	36	True	AATAAA	-38	NA	19343892	19361705	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_19344095_19349311_19349372_19349936_19350111_19351259_19351408_19353081_19353174_19354490_19354584_19355348_19355505_19355685_19355758_19357651_19357720_19358915_19359025_19359488
transcript_202397.known	chrX	+	3349	11	FSM	ENSG00000131828.14	ENST00000422285.7	3349	11	0	0	0	0	multi-exon	FALSE	canonical	3	1161	junction_1	81.2561382296747	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTGAACCACGCTAATAC	19332149	True	NA	49	True	AAAAAG	-19	NA	19343926	19361718	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_19344095_19349311_19349372_19349936_19350111_19351280_19351408_19353081_19353174_19354490_19354584_19355348_19355505_19355685_19355758_19357651_19357720_19358915_19359025_19359488
transcript_202399.known	chrX	+	3277	10	FSM	ENSG00000131828.14	ENST00000540249.5	3277	10	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_5	388.732921104731	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACCCTGTATCACTGA	19332115	True	NA	36	True	AATAAA	-38	NA	19343892	19361705	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_19344095_19349311_19349372_19349936_19350111_19351280_19351408_19353081_19353174_19355348_19355505_19355685_19355758_19357651_19357720_19358915_19359025_19359488
transcript_20240.nic	chr1	-	2959	11	ISM	ENSG00000143776.20	ENST00000366764.8	5158	36	-1446	134899	-163	-17152	5prime_fragment	FALSE	canonical	3	22	junction_9	7.11617874986288	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTGAAAAACTAAGAAAACAA	-227318635	False	NA	NA	False	AATAAA	-18	NA	227318655	227129135	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_227129232_227139575_227139743_227142944_227143025_227145488_227145738_227147358_227147560_227160542_227160637_227193785_227193935_227199556_227199653_227213135_227213220_227254063_227254156_227317004
transcript_202408.known	chrX	-	4728	18	FSM	ENSG00000147010.18	ENST00000397821.8	4728	18	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_4	44.8435187788669	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTTGTTCAAAGTTGTC	NA	False	NA	NA	False	ATTAAA	-18	NA	19887600	19533976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_19536459_19537716_19537781_19541924_19542194_19545921_19546051_19549973_19550084_19569102_19569189_19588642_19588803_19592066_19592148_19594948_19595001_19607937_19608046_19631863_19631959_19645399_19645476_19683822_19684029_19695611_19695742_19706880_19706985_19746317_19746442_19836124_19836283_19887306
transcript_202411.known	chrX	-	4062	17	FSM	ENSG00000184368.16	ENST00000379643.10	4062	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	4.16411380127873	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGAGTCAACTGCATAAAG	NA	False	NA	NA	False	ATTAAA	-24	NA	20116907	20006712	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_20008399_20010776_20011053_20012348_20012536_20013053_20013133_20013568_20013626_20015222_20015328_20016093_20016326_20024950_20025084_20025680_20025953_20042501_20042630_20044363_20044525_20050823_20050947_20052877_20052989_20056679_20056792_20063413_20063578_20064727_20064806_20116749
transcript_202414.known	chrX	-	4414	7	FSM	ENSG00000173674.11	ENST00000379607.10	4414	7	0	0	0	0	multi-exon	FALSE	canonical	3	834	junction_4	119.757741573005	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGTATACAATTGATTCT	NA	False	NA	-6	True	AATAAA	-18	NA	20141838	20124524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_20128312_20130515_20130608_20132181_20132264_20133956_20134008_20135737_20135842_20138538_20138623_20141624
transcript_202423.known	chrX	-	2682	22	FSM	ENSG00000177189.14	ENST00000646610.1	2682	22	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_21	18.0341072677111	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCATATACAGTACATTTC	NA	False	NA	NA	False	NA	NA	NA	20267100	20154931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_20155521_20156108_20156250_20161643_20161762_20162963_20163041_20164898_20165061_20167588_20167748_20169401_20169492_20172745_20172872_20175163_20175289_20176249_20176353_20176433_20176499_20176995_20177085_20186295_20186367_20187827_20187971_20188496_20188535_20193486_20193594_20194188_20194269_20195064_20195146_20204021_20204104_20209287_20209405_20234757_20234815_20267038
transcript_202425.known	chrX	+	5753	22	FSM	ENSG00000149970.16	ENST00000379510.5	5753	22	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_11	6.84456518431655	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTATAAAGCACCTACTT	21373542	True	NA	4	True	AATAAA	-17	NA	21374417	21654689	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_21374962_21426496_21426661_21432611_21432815_21440693_21440782_21470765_21470808_21490458_21490579_21497786_21497847_21501519_21501589_21516484_21516632_21526866_21527001_21531855_21532068_21561470_21561561_21563237_21563453_21590571_21590621_21591021_21591195_21594973_21595048_21595323_21595396_21601281_21601350_21606778_21606880_21609070_21609618_21648830_21649028_21652305
transcript_202426.known	chrX	+	5669	21	FSM	ENSG00000149970.16	ENST00000425654.7	5669	21	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_11	6.64379409674924	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCACCTACTTTATTCA	21373542	True	NA	10	True	AATAAA	-23	NA	21374417	21654695	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_21374962_21426496_21426661_21432611_21432815_21440693_21440782_21470765_21470808_21490458_21490579_21497786_21497847_21501519_21501589_21516484_21516632_21526866_21527001_21531855_21532068_21563237_21563453_21590571_21590621_21591021_21591195_21594973_21595048_21595323_21595396_21601281_21601350_21606778_21606880_21609070_21609618_21648830_21649028_21652305
transcript_202427.known	chrX	+	5040	20	FSM	ENSG00000149970.16	ENST00000645245.1	5040	20	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_10	6.63700696819318	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGTATATGTAAAAAAAAAAA	21373592	True	NA	NA	False	ATTAAA	-13	NA	21374467	21654263	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_21374962_21426496_21426661_21432611_21432815_21440693_21440782_21470765_21470808_21490458_21490579_21497786_21497847_21501519_21501589_21526866_21527001_21531855_21532068_21563237_21563453_21590571_21590621_21591021_21591195_21594973_21595048_21595323_21595396_21601281_21601350_21606778_21606880_21609070_21609618_21648830_21649028_21652305
transcript_202428.known	chrX	+	2168	15	FSM	ENSG00000149970.16	ENST00000647423.1	2168	15	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_11	7.65719616186137	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGTAGCTTAACTAAAAGG	21374811	False	NA	NA	False	AATAAA	-19	NA	21374832	21591467	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_21374962_21426496_21426661_21432611_21432815_21440693_21440782_21470765_21470808_21490458_21490579_21497786_21497847_21501519_21501589_21516484_21516632_21526866_21527001_21531855_21532068_21561470_21561561_21563237_21563453_21590571_21590621_21591021
transcript_20243.known	chr1	+	533	5	FSM	ENSG00000181450.18	ENST00000465266.1	533	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	13.3486890742125	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGACCTTTTGCCAGAG	227558698	True	NA	NA	False	NA	NA	NA	227563550	227654353	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_227563725_227582513_227582607_227646543_227646671_227650955_227651077_227654335
transcript_202437.known	chrX	+	3808	6	FSM	ENSG00000149970.16	ENST00000644832.1	3808	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	2.72763633939717	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAATAATTAGCAGAAAAT	21373546	True	NA	NA	False	TTTAAA	-2	NA	21374421	21493229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_21374962_21426496_21426661_21432611_21432815_21440693_21440782_21470765_21470808_21490458
transcript_202438.known	chrX	+	4446	11	FSM	ENSG00000012174.12	ENST00000379484.10	4446	11	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_8	11.6687617166519	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCGTCTATGTGTTGTCT	21837602	True	NA	24	True	AATAAA	-32	NA	21839616	21885423	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_21839810_21843169_21843319_21845170_21845385_21851508_21851613_21853375_21853504_21868466_21868586_21869497_21869679_21878041_21878137_21878496_21878693_21880896_21880973_21882432
transcript_20244.known	chr1	+	8543	4	FSM	ENSG00000181450.18	ENST00000343776.10	8543	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	0.942809041582063	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACTTGTTTTCTTTAACA	227558703	True	NA	18	True	AATAAA	-18	NA	227563555	227662461	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_227563725_227646543_227646671_227650955_227651077_227654335
transcript_202440.known	chrX	+	1703	11	FSM	ENSG00000102172.16	ENST00000404933.7	1703	11	0	0	0	0	multi-exon	FALSE	canonical	2	1181	junction_6	111.42190089924	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGTGTTCTGTCGTTT	21915644	True	NA	16	True	ATTAAA	-16	NA	21940708	21994837	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_21940874_21967195_21967317_21971896_21971991_21972506_21972572_21977060_21977237_21977959_21978115_21978876_21978967_21984303_21984419_21985143_21985224_21992596_21992713_21994311
transcript_202445.known	chrX	+	1174	9	FSM	ENSG00000102172.16	ENST00000379404.5	1174	9	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_2	481.16484636245	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTATTTTTAATTTAAAAA	21915650	True	NA	NA	False	NA	NA	NA	21940714	21994473	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_21940874_21967195_21967317_21977060_21977237_21977959_21978115_21978876_21978967_21984303_21984419_21985143_21985224_21992596_21992713_21994311
transcript_202447.nic	chrX	+	406	3	ISM	ENSG00000102172.16	ENST00000404933.7	1703	11	-26	22847	-26	-5999	5prime_fragment	FALSE	canonical	3	1314	junction_2	39.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGTTTTTCACTTTCATT	21915618	True	NA	NA	False	NA	NA	NA	21940682	21971990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_21940874_21967195_21967317_21971896
transcript_20245.known	chr1	+	2768	6	FSM	ENSG00000143740.15	ENST00000680854.1	2768	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	151.993420910249	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGCCCAGGGAGCTCT	227728306	True	NA	NA	False	NA	NA	NA	227728634	227781821	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_227728787_227731584_227731748_227747691_227748234_227758994_227759486_227766958_227767084_227780526
transcript_202457.known	chrX	+	956	7	FSM	ENSG00000123131.13	ENST00000379341.9	956	7	0	0	0	0	multi-exon	FALSE	canonical	3	2658	junction_6	355.934294810464	1754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTGTTGCAGTAGTAAT	23641513	True	NA	18	True	AATAAA	-20	NA	23667492	23686397	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_23667812_23671528_23671647_23674989_23675107_23679164_23679288_23682395_23682527_23683670_23683706_23686284
transcript_20246.known	chr1	+	2622	6	FSM	ENSG00000143740.15	ENST00000681149.1	2622	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	154.152392131942	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGCCCAGGGAGCTCT	227732476	True	NA	NA	False	NA	NA	NA	227735427	227781821	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_227735500_227739205_227739303_227747691_227748234_227758994_227759486_227766958_227767084_227780526
transcript_202461.known	chrX	+	852	3	FSM	ENSG00000123131.13	ENST00000379331.3	852	3	0	0	0	0	multi-exon	FALSE	canonical	3	2913	junction_2	29.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGTTACACAGTTATATA	23641571	True	NA	NA	False	TTTAAA	-12	NA	23667550	23675462	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_23667812_23671528_23671647_23674989
transcript_202464.known	chrX	-	1675	15	FSM	ENSG00000123130.17	ENST00000336430.11	1675	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	66.17744390374	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGAACCTACCATGTTGC	NA	False	NA	-25	True	AATAAA	-21	NA	23743276	23703670	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_23703983_23704693_23704845_23704992_23705081_23705508_23705595_23705767_23705859_23706627_23706740_23707876_23707945_23713134_23713209_23721880_23721985_23722669_23722754_23730526_23730565_23730815_23730987_23733171_23733218_23735918_23736017_23743124
transcript_202466.nnic	chrX	-	2760	15	NNC	ENSG00000123130.17	novel	1675	15	NA	NA	-14	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	87.2436478010442	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAATTGTGAACCTACCA	NA	False	NA	-31	True	AATAAA	-15	NA	23743304	23703676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_23703983_23704693_23704845_23704992_23705081_23705508_23705595_23705767_23705859_23706627_23707215_23707288_23707945_23713134_23713209_23721880_23721985_23722669_23722754_23730526_23730565_23730815_23730987_23733171_23733218_23735918_23736017_23743124
transcript_202467.nic	chrX	-	1592	14	NIC	ENSG00000123130.17	novel	1675	15	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_13	62.3027538403775	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAATTGTGAACCTACCA	NA	False	NA	-31	True	AATAAA	-15	NA	23743297	23703676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_23703983_23704693_23704845_23704992_23705081_23705508_23705595_23705767_23705859_23706627_23706740_23707876_23707945_23713134_23713209_23721880_23721985_23722669_23722754_23730526_23730565_23730815_23730987_23733171_23733218_23743124
transcript_20247.nnic	chr1	-	2473	6	NNC	ENSG00000081692.13	novel	2484	6	NA	NA	48	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	46.918653007093	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTTCCAGGGACCTGTA	-227733496	True	NA	-1	True	AATGAA	-15	NA	227735363	227731190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_227732677_227732880_227732956_227733413_227733682_227733906_227734033_227734650_227734817_227735011
transcript_202470.nic	chrX	-	2834	14	NIC	ENSG00000123130.17	novel	1675	15	NA	NA	-14	0	intron_retention	FALSE	canonical	0	0	junction_12	68.4751931067443	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAATTGTGAACCTACCA	NA	False	NA	-31	True	AATAAA	-15	NA	23743304	23703676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_23703983_23704693_23704845_23704992_23705081_23705508_23705595_23705767_23705859_23706627_23707945_23713134_23713209_23721880_23721985_23722669_23722754_23730526_23730565_23730815_23730987_23733171_23733218_23735918_23736017_23743124
transcript_202474.nic	chrX	-	906	9	ISM	ENSG00000123130.17	ENST00000336430.11	1675	15	-28	4163	-14	-3	5prime_fragment	FALSE	canonical	0	0	junction_7	85.2023327145449	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTACGCTGCAGAAGAGA	NA	False	NA	-5	True	AATAAA	-20	NA	23743304	23707833	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_23707945_23713134_23713209_23721880_23721985_23722669_23722754_23730526_23730565_23730815_23730987_23733171_23733218_23735918_23736017_23743124
transcript_202475.nic	chrX	-	835	8	NIC	ENSG00000123130.17	novel	1675	15	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	111.25187455426	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACGCTGCAGAAGAGATTA	NA	False	NA	-2	True	AATAAA	-23	NA	23743304	23707830	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_23707945_23721880_23721985_23722669_23722754_23730526_23730565_23730815_23730987_23733171_23733218_23735918_23736017_23743124
transcript_202477.known	chrX	+	1135	7	FSM	ENSG00000130066.17	ENST00000489394.5	1135	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	286.757010957593	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGGTGTAAGCATTTT	23779090	True	NA	24	True	AATAAA	-17	NA	23783196	23786210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_23783418_23783657_23783710_23783799_23783884_23784293_23784404_23785327_23785430_23785519_23785561_23785685
transcript_202479.known	chrX	+	1049	6	FSM	ENSG00000130066.17	ENST00000379270.5	1049	6	0	0	0	0	multi-exon	FALSE	canonical	3	604	junction_5	28.032837887021	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGGTGTAAGCATTTT	23779066	True	NA	24	True	AATAAA	-17	NA	23783172	23786210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_23783418_23783657_23783710_23783799_23783884_23785327_23785430_23785519_23785561_23785685
transcript_202482.nic	chrX	+	2538	5	NIC	ENSG00000130066.17	novel	1135	7	NA	NA	-45	0	intron_retention	FALSE	canonical	3	604	junction_4	28.2179021190449	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGGTGTAAGCATTTT	23779021	True	NA	24	True	AATAAA	-17	NA	23783127	23786210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_23783418_23783657_23783710_23783799_23785430_23785519_23785561_23785685
transcript_202483.known	chrX	+	868	5	FSM	ENSG00000130066.17	ENST00000379254.5	868	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	273.20722446524	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCATTCTCGTGAGTCAT	23779066	True	NA	24	True	GATAAA	-37	NA	23783172	23786113	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_23783418_23783657_23783710_23785327_23785430_23785519_23785561_23785685
transcript_202489.known	chrX	+	801	2	FSM	ENSG00000130066.17	ENST00000379251.7	801	2	0	0	0	0	multi-exon	FALSE	canonical	3	632	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGTTTGACCCTAACG	23779066	True	NA	NA	False	CATAAA	-4	NA	23783172	23784213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_23783418_23783657
transcript_20249.known	chr1	-	2484	6	FSM	ENSG00000081692.13	ENST00000620518.5	2484	6	0	0	0	0	multi-exon	TRUE	canonical	3	104	junction_1	11.3736537664903	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTTCCAGGGACCTGTA	-227733435	True	NA	-1	True	AATGAA	-15	NA	227735302	227731190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_227732677_227732880_227733028_227733413_227733682_227733906_227734033_227734650_227734817_227735011
transcript_202493.known	chrX	-	1122	9	FSM	ENSG00000184831.14	ENST00000379226.9	1122	9	0	0	0	0	multi-exon	TRUE	canonical	3	156	junction_1	59.0566465353393	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGATATCACTGAGTGATG	NA	False	NA	-4	True	ATTAAA	-21	NA	23907938	23833352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_23833613_23840312_23840378_23856301_23856383_23858641_23858734_23868592_23868689_23874402_23874458_23878914_23879035_23880844_23880953_23907693
transcript_202494.nic	chrX	-	1033	9	NIC	ENSG00000184831.14	novel	1122	9	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	145	junction_1	62.408808472843	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATCCGATATCACTG	NA	False	NA	-11	True	ATTAAA	-14	NA	23907958	23833359	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_23833511_23840312_23840378_23856301_23856383_23858641_23858734_23868592_23868689_23874402_23874458_23878914_23879035_23880844_23880953_23907693
transcript_202498.known	chrX	-	916	8	FSM	ENSG00000184831.14	ENST00000490078.2	916	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	112.332233184625	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTTAAAAAAAAAAATCCGAT	NA	False	NA	-18	True	ATTAAA	-7	NA	23907903	23833366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_23833511_23840312_23840378_23856301_23856383_23858641_23858734_23868592_23868689_23878914_23879035_23880844_23880953_23907693
transcript_202504.nic	chrX	-	2369	3	FSM	ENSG00000174010.10	ENST00000685367.1	6488	3	-6	4125	-6	-1442	multi-exon	FALSE	canonical	3	29	junction_1	4	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCACCAGTTTTACTATCA	NA	False	NA	NA	False	ATTAAA	-16	NA	24025323	23987840	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_23989031_24005988_24006701_24024856
transcript_20251.known	chr1	-	2502	6	FSM	ENSG00000081692.13	ENST00000438896.3	2502	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	45.4092501589709	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGCTTCATATGTGTCTG	-227733544	False	NA	-12	True	NA	NA	NA	227735411	227731233	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_227732677_227732928_227733028_227733413_227733682_227733906_227734033_227734650_227734817_227735011
transcript_202513.known	chrX	+	3457	12	FSM	ENSG00000130741.11	ENST00000253039.9	3457	12	0	0	0	0	multi-exon	FALSE	canonical	3	1309	junction_6	115.565229693233	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATATCTAACATGTCCC	24038251	True	NA	25	True	AATAAA	-21	NA	24054955	24078810	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_24055038_24055614_24055679_24057420_24057549_24057632_24057755_24060087_24060183_24062415_24062575_24064200_24064336_24065997_24066093_24067963_24068109_24071557_24071728_24073090_24073264_24076721
transcript_202525.nic	chrX	+	621	6	ISM	ENSG00000130741.11	ENST00000253039.9	3457	12	-34	16299	-24	-115	5prime_fragment	FALSE	canonical	3	1434	junction_3	87.8075167625187	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGATTTGGTAAAAGAAAGT	24054886	False	NA	NA	False	AATAAA	-2	NA	24054921	24062511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_24055038_24055614_24055679_24057420_24057549_24057632_24057755_24060087_24060183_24062415
transcript_202533.known	chrX	+	7612	10	FSM	ENSG00000005889.16	ENST00000304543.10	7612	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	9.82564043085962	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGCATCTGTACCGACTT	24148862	True	NA	NA	False	NA	NA	NA	24149728	24216255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_24149795_24151690_24151801_24152719_24152831_24172714_24172801_24179182_24179771_24207325_24207476_24207711_24207856_24208217_24208371_24208899_24209041_24210192
transcript_202535.nic	chrX	+	1981	9	ISM	ENSG00000005889.16	ENST00000304543.10	7612	10	-465	7248	91	6	5prime_fragment	FALSE	canonical	3	16	junction_1	10.1850073637676	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAAGACCTGATTCCAGG	NA	False	NA	NA	False	AAGAAA	-2	NA	24149263	24209007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_24149795_24151690_24151801_24152719_24152831_24172714_24172801_24179182_24179771_24207325_24207476_24207711_24207856_24208217_24208371_24208899
transcript_202541.nic	chrX	+	1589	7	NIC	ENSG00000005889.16	novel	7513	9	NA	NA	-194	6	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	7.55902698029904	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAAGACCTGATTCCAGG	NA	False	NA	NA	False	AAGAAA	-2	NA	24149434	24209007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_24149795_24172714_24172801_24179182_24179771_24207325_24207476_24207711_24207856_24208217_24208371_24208899
transcript_202543.known	chrX	-	348	1	FSM	ENSG00000225071.1	ENST00000419089.1	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTGAGTTCTTAAAGAC	NA	False	NA	NA	False	NA	NA	NA	24429920	24429572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_24429600_24429900
transcript_202548.known	chrX	+	12720	12	FSM	ENSG00000067992.17	ENST00000568479.2	12720	12	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_11	26.0314495108583	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCGTCACTGTGGTGTT	24460115	True	NA	21	True	AATAAA	-18	NA	24465285	24550466	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_24465562_24494741_24494884_24498828_24498901_24503326_24503512_24505208_24505299_24518932_24519011_24526197_24526275_24527573_24527676_24528075_24528187_24531656_24531771_24533928_24534069_24539133
transcript_202552.known	chrX	+	1741	11	FSM	ENSG00000067992.17	ENST00000379162.9	1741	11	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_3	17.9599554565149	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTATGATTCCACTTATGT	24460115	True	NA	NA	False	AATAAA	-20	NA	24465285	24534422	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_24465562_24494741_24494884_24498828_24498901_24503326_24503512_24505208_24505299_24518932_24519011_24526197_24526275_24527573_24527676_24528075_24528187_24531656_24531771_24533928
transcript_202561.nic	chrX	+	1819	3	FSM	ENSG00000067992.17	ENST00000493226.2	1787	3	15	-47	-11	47	multi-exon	FALSE	canonical	3	211	junction_1	2	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAACAATGCAACAATAAGAA	24460088	True	NA	NA	False	AATAAA	-4	NA	24465258	24500202	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_24465562_24494741_24494884_24498828
transcript_202562.known	chrX	-	5558	8	FSM	ENSG00000102230.14	ENST00000379144.7	5558	8	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_3	10.6330251805305	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCGTGTGTCATTGTCAT	NA	False	NA	-5	True	AATAAA	-17	NA	24647347	24558086	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_24562506_24575129_24575319_24579315_24579459_24587240_24587320_24590022_24590175_24607744_24607862_24618984_24619085_24646988
transcript_202565.known	chrX	+	5440	37	FSM	ENSG00000101868.13	ENST00000379059.7	5440	37	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	33.6337389396678	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTGTGGTGAATCCTTA	24689510	True	NA	17	True	AATAAA	-17	NA	24693946	24996986	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_24693987_24699424_24699550_24703250_24703348_24704388_24704470_24714553_24714670_24715140_24715204_24716361_24716455_24716883_24716972_24717289_24717492_24717579_24717759_24723154_24723268_24724334_24724452_24725980_24726056_24726932_24727072_24727781_24727937_24732369_24732455_24733754_24733817_24735398_24735489_24737624_24737742_24739374_24739551_24741374_24741505_24742001_24742122_24743229_24743330_24745417_24745543_24748310_24748461_24748869_24748993_24809897_24809931_24810707_24810801_24812657_24812864_24814978_24815112_24821451_24821584_24826426_24826602_24841651_24841831_24843545_24843678_24888005_24888123_24930452_24930550_24995804
transcript_202568.nic	chrX	+	3148	28	ISM	ENSG00000101868.13	ENST00000379068.8	5487	37	-33	186205	12	0	5prime_fragment	TRUE	canonical	3	122	junction_19	15.1891593715474	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAAGTTGGGAAACAAGG	24689448	True	NA	NA	False	GATAAA	-28	NA	24693884	24810781	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_24694005_24699424_24699550_24703250_24703348_24704388_24704470_24714553_24714670_24715140_24715204_24716361_24716455_24716883_24716972_24717289_24717492_24717579_24717759_24723154_24723268_24724334_24724452_24725980_24726056_24726932_24727072_24727781_24727937_24732369_24732455_24733754_24733817_24735398_24735489_24737624_24737742_24739374_24739551_24741374_24741505_24742001_24742122_24743229_24743330_24745417_24745543_24748310_24748461_24748869_24748993_24809897_24809931_24810707
transcript_202572.known	chrX	+	2399	15	FSM	ENSG00000101868.13	ENST00000677890.1	2399	15	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_7	14.0946146902037	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATATCCCGTTTTCTCTA	24689504	True	NA	NA	False	ATTAAA	-23	NA	24693940	24728628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_24694005_24699424_24699550_24703250_24703348_24704388_24704470_24714553_24714670_24715140_24715204_24716361_24716455_24716883_24716972_24717289_24717492_24717579_24717759_24723154_24723268_24724334_24724452_24725980_24726056_24726932_24727072_24727781
transcript_202573.known	chrX	+	1803	12	FSM	ENSG00000101868.13	ENST00000678847.1	1803	12	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_7	14.8507728602068	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTCTGATAGAATGAAAATC	24689436	True	NA	NA	False	TTTAAA	-19	NA	24693872	24724848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_24694005_24699424_24699550_24703250_24703348_24704388_24704470_24714553_24714670_24715140_24715204_24716361_24716455_24716883_24716972_24717289_24717492_24717579_24717759_24723154_24723268_24724334
transcript_202574.known	chrX	-	678	1	FSM	ENSG00000232472.1	ENST00000447718.1	678	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCATCCTGGATCATGGC	NA	False	NA	NA	False	NA	NA	NA	24789069	24788391	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_24788400_24789100
transcript_202575.known	chrX	+	4515	21	FSM	ENSG00000198814.14	ENST00000427190.6	4515	21	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_8	14.4446356824947	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGTGAATTTGTAAATCA	30652750	True	NA	NA	False	AATAAA	-16	NA	30653422	30731462	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_30653616_30665510_30665585_30668011_30668119_30677374_30677453_30691122_30691200_30694399_30694538_30696041_30696152_30696616_30696684_30697731_30697750_30700413_30700450_30700837_30700906_30707555_30707599_30708053_30708135_30718537_30718617_30719418_30719516_30720010_30720096_30720620_30720742_30720851_30720996_30724100_30724182_30727465_30727553_30728731
transcript_202579.known	chrX	+	3638	20	FSM	ENSG00000198814.14	ENST00000378946.7	3638	20	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_19	18.8547443642589	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCATTTCTCATTTACAG	30652686	True	NA	NA	False	AATAAA	-18	NA	30653358	30730608	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_30653616_30665510_30665585_30668011_30668119_30677374_30677453_30691122_30691200_30694399_30694538_30696041_30696152_30696616_30696684_30697731_30697750_30700413_30700450_30700837_30700906_30707555_30707599_30708053_30708135_30718537_30718617_30719418_30719516_30720010_30720096_30720620_30720742_30720851_30720996_30724100_30724182_30728731
transcript_202581.known	chrX	+	3707	20	FSM	ENSG00000198814.14	ENST00000378943.7	3707	20	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_8	18.0568508188954	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCATTTCTCATTTACAG	30652686	True	NA	NA	False	AATAAA	-18	NA	30653358	30730608	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_30653616_30665510_30665585_30668011_30668119_30677374_30677453_30691122_30691200_30694399_30694538_30696041_30696152_30696616_30696684_30700413_30700450_30700837_30700906_30707555_30707599_30708053_30708135_30718537_30718617_30719418_30719516_30720010_30720096_30720620_30720742_30720851_30720996_30724100_30724182_30727465_30727553_30728731
transcript_202591.known	chrX	-	4645	17	FSM	ENSG00000198947.18	ENST00000378723.7	4645	17	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	8.47030659126339	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACTGGACTGCAGTACTT	NA	False	NA	NA	False	AATAAA	-27	NA	31266952	31119218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_31121931_31134101_31134195_31146290_31146415_31147274_31147519_31169442_31169602_31172347_31172414_31173538_31173605_31177931_31177971_31178668_31178806_31180369_31180482_31182737_31182905_31203960_31204119_31206581_31206668_31209497_31209700_31223046_31223122_31260954_31261017_31266809
transcript_202594.known	chrX	-	2224	16	FSM	ENSG00000198947.18	ENST00000361471.8	2224	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	9.62958404547615	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTTAAAAATTTATAACAG	NA	False	NA	NA	False	NA	NA	NA	31266907	31121555	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_31121931_31134101_31134195_31146290_31146415_31147274_31147519_31169442_31169602_31172347_31172414_31173538_31173605_31178668_31178806_31180369_31180482_31182737_31182905_31203960_31204119_31206581_31206668_31209497_31209700_31223046_31223122_31260954_31261017_31266809
transcript_202596.known	chrX	-	1400	9	FSM	ENSG00000198947.18	ENST00000681654.1	1400	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	5.96735913114001	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCCACTAATTGCCTTA	NA	False	NA	NA	False	NA	NA	NA	31266963	31178421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_31178806_31180369_31180482_31182737_31182905_31203960_31204119_31206581_31206668_31209497_31209700_31223046_31223122_31260954_31261017_31266809
transcript_202598.known	chrX	-	2689	3	FSM	ENSG00000198947.18	ENST00000681870.1	2689	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	16	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTTCCCGGAGTACCGG	NA	False	NA	NA	False	AATAAA	-16	NA	31266952	31237711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_31240196_31260954_31261017_31266809
transcript_2026.known	chr1	-	3731	22	FSM	ENSG00000171680.23	ENST00000400915.8	3731	22	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_21	25.9843839376034	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGAAGAGTCCTTTGCTT	-6496933	True	NA	-12	True	TATAAA	-18	NA	6497424	6467121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6467573_6467824_6468587_6469041_6469242_6469334_6469451_6469543_6469677_6470235_6470356_6470505_6470644_6470734_6470885_6470989_6471101_6471487_6471638_6471757_6471809_6472526_6472623_6472985_6473175_6473250_6473455_6474012_6474165_6474450_6474588_6475046_6475139_6475461_6475523_6475930_6476037_6477528_6477659_6496492_6496570_6497319
transcript_20260.known	chr1	+	1541	5	FSM	ENSG00000143740.15	ENST00000680695.1	1541	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	162.712937408185	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAAATGCTGGCTTCAGA	227728378	True	NA	-3	True	NA	NA	NA	227728706	227781208	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_227728787_227731584_227731748_227758994_227759486_227766958_227767084_227780526
transcript_202600.known	chrX	+	4400	4	FSM	ENSG00000130962.18	ENST00000378628.9	4400	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	12.1197726417986	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATTTTTTTTCTGCCATG	37348394	True	NA	5	True	AATAAA	-18	NA	37349363	37457291	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_37349396_37406208_37406260_37425839_37426001_37453135
transcript_202603.known	chrX	-	719	5	FSM	ENSG00000165169.11	ENST00000432389.2	719	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	37.0944739819828	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGAATTTGTCAGTGTAT	NA	False	NA	-5	True	ACTAAA	-24	NA	37847408	37840542	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_37840652_37841027_37841106_37841781_37841906_37846316_37846359_37847042
transcript_202605.known	chrX	-	2151	5	FSM	ENSG00000165169.11	ENST00000378578.9	2151	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_4	15.2212844398888	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGCTTCTGGATAATCA	NA	False	NA	0	True	AATAAA	-21	NA	37847571	37838835	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_37840652_37841027_37841106_37841781_37841906_37846316_37846359_37847480
transcript_202608.nic	chrX	-	2038	11	NIC	ENSG00000101955.15	novel	1846	10	NA	NA	-61	5	combination_of_known_junctions	FALSE	canonical	3	6	junction_2	16.7454471424325	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCAAATTTAGTAGAACTC	NA	False	NA	-7	True	AATAAA	-14	NA	38220985	38149345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_38149895_38153947_38154033_38154461_38154584_38156895_38157030_38160016_38160197_38160932_38161055_38164768_38164896_38171880_38172058_38174159_38174352_38178284_38178345_38220695
transcript_202609.known	chrX	-	1846	10	FSM	ENSG00000101955.15	ENST00000378533.4	1846	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	5.61743318211757	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTAGAACTCACTTTGT	NA	False	NA	0	True	AATAAA	-21	NA	38220871	38149338	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_38149895_38154461_38154584_38156895_38157030_38160016_38160197_38160932_38161055_38164768_38164896_38171880_38172058_38174159_38174352_38178284_38178345_38220695
transcript_20261.known	chr1	+	2552	5	FSM	ENSG00000143740.15	ENST00000680992.1	2552	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	135.238677899483	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGCCCAGGGAGCTCT	227728359	True	NA	NA	False	NA	NA	NA	227728687	227781821	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_227728787_227747691_227748234_227758994_227759486_227766958_227767084_227780526
transcript_202610.known	chrX	-	1725	9	FSM	ENSG00000101955.15	ENST00000432886.6	1725	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	16.7182534973005	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGAACTCACTTTGTTTG	NA	False	NA	3	True	AATAAA	-24	NA	38220924	38149335	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_38149895_38154461_38154584_38156895_38157030_38160016_38160197_38160932_38161055_38164768_38164896_38174159_38174352_38178284_38178345_38220695
transcript_202611.known	chrX	-	3053	19	FSM	ENSG00000156313.15	ENST00000642395.2	3053	19	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_6	7.7028133388609	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTGATAAGTATTAATAAA	NA	False	NA	2	True	AATAAA	-27	NA	38327509	38269162	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_38269833_38273385_38273478_38275088_38275147_38276586_38276773_38287093_38287246_38287860_38288042_38290958_38291025_38291392_38291485_38297283_38297453_38298955_38299142_38301246_38301372_38304634_38304791_38310614_38310774_38317315_38317466_38318828_38318988_38321026_38321090_38322852_38322946_38323398_38323525_38327339
transcript_202619.known	chrX	+	1742	8	FSM	ENSG00000156298.13	ENST00000378482.7	1742	8	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_3	11.0804111026659	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTCTGGTTCTGTTC	38560364	True	NA	NA	False	AATAAA	-18	NA	38561541	38688918	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_38561628_38666120_38666310_38671375_38671451_38674220_38674317_38675704_38675861_38681203_38681288_38687598_38687675_38687938
transcript_20262.known	chr1	+	1397	5	FSM	ENSG00000143740.15	ENST00000478768.3	1397	5	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_4	121.004906925298	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTGTCTCCCTAGTACT	227732483	True	NA	8	True	AATGAA	-20	NA	227735434	227770744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_227735500_227747691_227748234_227758994_227759486_227766958_227767084_227770570
transcript_202623.known	chrX	+	3781	3	FSM	ENSG00000165175.17	ENST00000614558.3	3758	3	-27	4	-8	-4	multi-exon	FALSE	canonical	3	18	junction_1	197	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTAAATTTTGTGTTCT	38798181	True	NA	21	True	AATAAA	-25	NA	38801431	38806528	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_38801488_38802534_38804414_38804682
transcript_202626.known	chrX	+	1889	3	FSM	ENSG00000165175.17	ENST00000378474.3	1889	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	205.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTCAACTAAATTGGACA	38798203	True	NA	-74	True	AATAAA	-9	NA	38801453	38806433	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_38801488_38804309_38804414_38804682
transcript_202627.known	chrX	+	1812	2	FSM	ENSG00000165175.17	ENST00000457894.5	1812	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGACAAGCGTCTGGTCCT	38798189	True	NA	-61	True	AATAAA	-22	NA	38801439	38806446	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_38801488_38804682
transcript_202629.known	chrX	+	2691	2	FSM	ENSG00000223486.1	ENST00000447651.1	2691	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCGAGAAAACACTCCGCAT	40009258	False	NA	22	True	AATAAA	-33	NA	40009275	40012182	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_40009802_40010017
transcript_20263.known	chr1	+	2403	5	FSM	ENSG00000143740.15	ENST00000426344.6	2403	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	122.240541556392	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCAGCTGGTCTTAGTCA	227732484	True	NA	NA	False	AATAAA	-20	NA	227735435	227776969	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_227735500_227747691_227748234_227758994_227759486_227766958_227767084_227775788
transcript_202634.known	chrX	+	2242	9	FSM	ENSG00000182220.15	ENST00000636580.2	2242	9	0	0	0	0	multi-exon	FALSE	canonical	3	977	junction_3	25.6259146178239	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAATGCATACTTTATGT	40570494	True	NA	NA	False	NA	NA	NA	40580969	40606848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_40581103_40588985_40589117_40591233_40591366_40597248_40597345_40597526_40597665_40598680_40598735_40599591_40599742_40600761_40600882_40605560
transcript_202638.known	chrX	+	1904	8	FSM	ENSG00000182220.15	ENST00000636287.1	1904	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	447.726775283903	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTCATTGCAGTACTA	40570522	True	NA	25	True	AATAAA	-19	NA	40580997	40606637	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_40581103_40588985_40589117_40591233_40591366_40597526_40597665_40598680_40598735_40599591_40599742_40600761_40600882_40605563
transcript_202639.known	chrX	+	1877	8	FSM	ENSG00000182220.15	ENST00000636251.1	1877	8	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_7	442.313629610004	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTTAATGATGATTCCAAA	40570494	True	NA	5	True	NA	NA	NA	40580969	40606617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_40581103_40591233_40591366_40597248_40597345_40597526_40597665_40598680_40598735_40599591_40599742_40600761_40600882_40605563
transcript_202641.known	chrX	+	1093	7	FSM	ENSG00000182220.15	ENST00000423649.2	1093	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	368.257910830017	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTATAGATTCCATAATAT	40570506	True	NA	94	True	NA	NA	NA	40580981	40605945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_40581103_40588985_40589117_40591233_40591366_40598680_40598735_40599591_40599742_40600761_40600882_40605560
transcript_202644.known	chrX	+	3593	2	FSM	ENSG00000182220.15	ENST00000637954.1	3593	2	0	0	0	0	multi-exon	FALSE	canonical	3	995	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAGACCCTATCTCTAGG	40570519	True	NA	NA	False	NA	NA	NA	40580994	40592470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_40581103_40588985
transcript_202645.known	chrX	+	1995	9	FSM	ENSG00000182220.15	ENST00000635774.1	1995	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	332.320980943124	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAGAATATTAAGTGGAAG	40570461	True	NA	-73	True	NA	NA	NA	40580936	40606539	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_40581103_40588985_40589117_40591233_40591366_40597248_40597345_40597526_40597665_40598651_40598735_40599591_40599742_40600761_40600882_40605560
transcript_202646.known	chrX	-	4244	7	FSM	ENSG00000185753.13	ENST00000327877.10	4244	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_6	6.54896090146283	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCTGTGTCGCATTTCC	NA	False	NA	0	True	AATAAA	-20	NA	40647561	40626920	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_40630163_40630613_40630774_40636532_40636713_40637006_40637157_40639008_40639129_40647006_40647142_40647304
transcript_20265.known	chr1	+	1923	5	FSM	ENSG00000143740.15	ENST00000617596.5	1923	5	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_1	49.443781206538	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGGTTTTTGAAGATGGG	227732483	True	NA	15	True	AATAAA	-18	NA	227735434	227781226	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_227735500_227747691_227748234_227758994_227759486_227766958_227767084_227780526
transcript_202650.known	chrX	-	2380	7	FSM	ENSG00000185753.13	ENST00000378421.1	2380	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	18.6406068093885	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCAAAACTTGCTACCAGG	NA	False	NA	0	True	AATAAA	-18	NA	40647521	40629936	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_40630163_40630613_40630774_40636532_40636713_40637006_40637157_40639008_40640321_40647006_40647142_40647304
transcript_202659.known	chrX	-	7996	31	FSM	ENSG00000180182.11	ENST00000324817.6	7996	31	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_30	73.2540783847562	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGACTTGTCACTTGGAGT	NA	False	NA	NA	False	ATTAAA	-16	NA	40735542	40648304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_40651880_40654363_40654557_40654934_40655061_40659226_40659335_40659427_40659608_40662924_40663161_40664306_40664490_40666719_40666852_40671860_40671973_40675220_40675362_40679863_40680134_40680757_40680911_40681851_40681944_40682602_40682750_40682835_40682997_40688453_40688531_40692182_40692318_40692707_40692903_40697023_40697184_40701164_40701244_40703443_40703570_40709347_40709460_40709978_40710130_40711168_40711302_40712185_40712294_40712913_40713043_40713777_40713908_40714536_40714711_40726745_40726852_40729318_40729346_40735197
transcript_202660.nic	chrX	-	4884	31	NIC	ENSG00000180182.11	novel	7996	31	NA	NA	-61	-1727	combination_of_known_junctions	FALSE	canonical	2	27	junction_30	81.7526078415171	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGACACTCACTTGTGTG	NA	False	NA	81	True	AATAAA	-24	NA	40735919	40651269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_40651880_40654363_40654557_40654934_40655061_40659226_40659335_40659427_40659608_40662924_40663161_40664306_40664490_40666719_40666852_40671860_40671973_40675220_40675362_40679863_40680134_40680757_40680911_40681851_40681944_40682602_40682750_40682835_40682997_40688453_40688531_40692182_40692318_40692707_40692903_40697023_40697184_40701164_40701244_40703443_40703570_40709347_40709460_40709978_40710130_40711168_40711302_40712185_40712294_40712913_40713043_40713777_40713908_40714536_40714711_40726745_40726852_40729318_40729346_40735721
transcript_202661.nnic	chrX	-	4765	31	NNC	ENSG00000180182.11	novel	7996	31	NA	NA	-78	-1727	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_30	82.6454004904219	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGACACTCACTTGTGTG	NA	False	NA	81	True	AATAAA	-24	NA	40735936	40651269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_40651880_40654363_40654557_40654934_40655061_40659226_40659335_40659427_40659608_40662924_40663161_40664306_40664490_40666719_40666852_40671860_40671973_40675220_40675362_40679863_40680134_40680757_40680911_40681851_40681944_40682602_40682750_40682835_40682997_40688453_40688531_40692182_40692318_40692707_40692903_40697023_40697184_40701164_40701244_40703443_40703570_40709347_40709460_40709978_40710130_40711168_40711302_40712185_40712294_40712913_40713043_40713777_40713908_40714536_40714711_40726745_40726852_40729318_40729346_40735857
transcript_202670.nnic	chrX	-	5276	30	NIC	ENSG00000180182.11	novel	7996	31	NA	NA	-61	-1727	combination_of_known_splicesites	FALSE	canonical	3	38	junction_7	88.4792645855137	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGACACTCACTTGTGTG	NA	False	NA	81	True	AATAAA	-24	NA	40735919	40651269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_40651880_40654363_40654557_40654934_40655061_40659226_40659335_40659427_40659608_40662924_40663161_40664306_40664490_40671860_40671973_40675220_40675362_40679863_40680134_40680757_40680911_40681851_40681944_40682602_40682750_40682835_40682997_40688453_40688531_40692182_40692318_40692707_40692903_40697023_40697184_40701164_40701244_40703443_40703570_40709347_40709460_40709978_40710130_40711168_40711302_40712185_40712294_40712913_40713043_40713777_40713908_40714536_40714711_40726745_40726852_40729318_40729346_40735197
transcript_202680.nic	chrX	-	2394	15	ISM	ENSG00000180182.11	ENST00000324817.6	7996	31	-377	43971	-61	-17055	5prime_fragment	FALSE	canonical	3	113	junction_14	65.0678217598486	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGCAGGAGAAATGTGTGC	NA	False	NA	NA	False	AAGAAA	-7	NA	40735919	40692275	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_40692318_40692707_40692903_40697023_40697184_40701164_40701244_40703443_40703570_40709347_40709460_40709978_40710130_40711168_40711302_40712185_40712294_40712913_40713043_40713777_40713908_40714536_40714711_40726745_40726852_40729318_40729346_40735197
transcript_202681.nic	chrX	-	1059	5	ISM	ENSG00000180182.11	ENST00000324817.6	7996	31	-377	65573	-61	0	5prime_fragment	FALSE	canonical	3	113	junction_4	69.656299069072	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATTGAAAAACAAGCCAC	NA	False	NA	NA	False	NA	NA	NA	40735919	40713877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_40713908_40714536_40714711_40726745_40726852_40729318_40729346_40735197
transcript_202683.known	chrX	+	900	2	FSM	ENSG00000234636.2	ENST00000456333.2	900	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAATATGGGTCATTTA	40735385	False	NA	8	True	GATAAA	-21	NA	40735399	40738701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_40735791_40738192
transcript_202688.nic	chrX	+	2189	8	ISM	ENSG00000124486.14	ENST00000324545.9	12591	45	-478	95496	-478	-27159	5prime_fragment	FALSE	canonical	3	850	junction_4	108.063095703673	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGCAAAGAATGAAGCCAA	41084773	False	NA	NA	False	NA	NA	NA	41084966	41141083	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_41086110_41123470_41123725_41128999_41129146_41131456_41131537_41134724_41134838_41136803_41137023_41140655_41140772_41140965
transcript_202691.known	chrX	+	6203	18	FSM	ENSG00000215301.11	ENST00000646223.1	6203	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	224.082952386327	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTTTGCTTCATGTCCT	41321341	True	NA	NA	False	AATACA	-19	NA	41334163	41351668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_41334298_41337407_41337466_41339035_41339084_41340635_41340815_41341483_41341617_41342494_41342654_41342736_41342837_41343215_41343352_41343736_41343823_41344029_41344129_41344238_41344400_41345179_41345325_41345403_41345549_41346228_41346411_41346504_41346623_41346858_41347013_41347314_41347452_41347639
transcript_202692.known	chrX	+	5594	17	FSM	ENSG00000215301.11	ENST00000645080.1	5594	17	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	183.169277923455	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTGTGTTTTTTTTTTT	41321339	True	NA	9	True	NA	NA	NA	41334161	41349891	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_41334298_41337407_41337466_41337690_41339084_41341483_41341617_41342494_41342654_41342736_41342837_41343215_41343352_41343736_41343823_41344029_41344129_41344238_41344400_41345179_41345325_41345403_41345549_41346228_41346411_41346504_41346623_41346858_41347013_41347314_41347452_41347639
transcript_202693.known	chrX	+	4554	17	FSM	ENSG00000215301.11	ENST00000646319.1	4554	17	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_15	107.601986505826	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGTTGTTGTCAATTG	41321352	False	NA	22	True	AATAAA	-19	NA	41334174	41350209	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_41334298_41337407_41337466_41339035_41339084_41341483_41341617_41342494_41342654_41342736_41342837_41343215_41343352_41343736_41343823_41344029_41344129_41344238_41344400_41345179_41345325_41345403_41345549_41346228_41346411_41346504_41346623_41346858_41347013_41347314_41347452_41347639
transcript_202697.known	chrX	+	4409	17	FSM	ENSG00000215301.11	ENST00000644109.1	4409	17	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	216.578760212076	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTAGTTGTGTGTTTTTT	41321339	True	NA	4	True	NA	NA	NA	41334161	41349886	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_41334298_41337407_41337466_41339038_41339084_41341483_41341617_41342494_41342654_41342736_41342837_41343215_41343352_41343736_41343823_41344029_41344129_41344238_41344565_41345179_41345325_41345403_41345549_41346228_41346411_41346504_41346623_41346858_41347013_41347311_41347452_41347639
transcript_202699.known	chrX	+	4435	16	FSM	ENSG00000215301.11	ENST00000646122.1	4435	16	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_15	62.3658025951189	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTAGTTGTGTGTTTTTT	41321339	True	NA	4	True	NA	NA	NA	41334161	41349886	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_41334298_41337407_41337466_41339035_41339084_41341483_41341617_41342494_41342654_41342736_41342837_41343215_41343352_41343736_41343823_41344029_41344129_41344238_41344400_41345179_41345325_41345403_41345549_41346228_41346411_41346504_41346623_41346858_41347013_41347311
transcript_202704.known	chrX	+	4122	16	FSM	ENSG00000215301.11	ENST00000441189.4	4122	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	171.851486270365	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCAGATGTTTGTTGTGT	41321339	True	NA	-22	True	AATGAA	-33	NA	41334161	41349860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_41334298_41337407_41337466_41339035_41339084_41341483_41341617_41342494_41342654_41342736_41342837_41343215_41343352_41343736_41343823_41344238_41344400_41345179_41345325_41345403_41345549_41346228_41346411_41346504_41346623_41346858_41347013_41347311_41347452_41347639
transcript_202706.known	chrX	+	4467	16	FSM	ENSG00000215301.11	ENST00000643963.1	4467	16	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	190.454007279681	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATAAAGTGCTCTTGCC	41321341	True	NA	-1	True	NA	NA	NA	41334163	41350247	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_41334298_41337407_41337466_41339035_41339084_41341483_41341617_41342494_41342654_41342736_41342837_41343736_41343823_41344029_41344129_41344238_41344400_41345179_41345325_41345403_41345549_41346228_41346411_41346504_41346623_41346858_41347013_41347314_41347452_41347639
transcript_202709.known	chrX	+	4649	16	FSM	ENSG00000215301.11	ENST00000646940.1	4649	16	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_14	62.8389122191727	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCCTTTGTTGTTGTCA	41321339	True	NA	18	True	AATAAA	-15	NA	41334161	41350205	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_41334298_41337407_41337466_41339035_41339084_41341483_41341617_41342494_41342837_41343215_41343352_41343736_41343823_41344029_41344129_41344238_41344400_41345179_41345325_41345403_41345549_41346228_41346411_41346504_41346623_41346858_41347013_41347311_41347452_41347639
transcript_202710.known	chrX	+	4786	16	FSM	ENSG00000215301.11	ENST00000457138.7	4786	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	170.921294427842	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTGGTTTATTTTCAGA	41333584	True	NA	-24	True	AATAAA	-34	NA	41333912	41350224	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_41334298_41337407_41337466_41341483_41341617_41342494_41342654_41342736_41342837_41343215_41343352_41343736_41343823_41344029_41344129_41344238_41344400_41345179_41345325_41345403_41345549_41346228_41346411_41346504_41346623_41346858_41347013_41347311_41347452_41347639
transcript_202721.nic	chrX	+	744	7	ISM	ENSG00000215301.11	ENST00000441189.4	4122	16	-1	6536	-1	-85	5prime_fragment	FALSE	canonical	3	591	junction_6	26.4868940337586	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTTGATGGCTTGTGCC	41321338	True	NA	NA	False	NA	NA	NA	41334160	41343324	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_41334298_41337407_41337466_41339035_41339084_41341483_41341617_41342494_41342654_41342736_41342837_41343215
transcript_202722.known	chrX	+	1434	3	FSM	ENSG00000215301.11	ENST00000643821.1	1434	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	330	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAATTTGTGGATTTCAA	41333968	False	NA	NA	False	ATTAAA	-22	NA	41334011	41338780	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_41334298_41337407_41337466_41337690
transcript_202723.known	chrX	-	8361	25	FSM	ENSG00000147044.23	ENST00000644347.1	8361	25	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_8	48.5257663514962	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGTTGTCTCCTCAGATT	NA	False	NA	-3	True	AATAAA	-19	NA	41923169	41514933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_41520597_41523950_41524035_41531006_41531210_41534705_41534787_41534892_41534974_41542690_41542807_41553718_41553916_41555599_41555636_41559778_41559848_41561558_41561645_41569667_41569747_41578339_41578529_41586906_41586988_41589514_41589593_41609903_41610026_41626603_41626704_41636577_41636662_41660438_41660562_41665276_41665453_41671427_41671531_41739383_41739457_41745523_41745602_41787177_41787284_41853114_41853228_41922929
transcript_202724.known	chrX	-	6048	26	FSM	ENSG00000147044.23	ENST00000644219.1	6048	26	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_8	42.4944984674487	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAATGGTTGACCTACT	NA	False	NA	NA	False	TTTAAA	-19	NA	41923161	41517307	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_41520597_41523950_41524035_41531006_41531210_41534705_41534787_41534892_41534974_41542690_41542807_41553718_41553916_41555599_41555636_41557031_41557101_41559778_41559848_41561558_41561645_41569667_41569747_41578339_41578529_41586906_41586988_41589514_41589593_41609903_41610026_41626603_41626704_41636577_41636662_41660438_41660562_41665276_41665453_41671427_41671531_41739383_41739457_41745523_41745602_41787177_41787284_41853114_41853228_41922929
transcript_202734.known	chrX	+	3931	15	FSM	ENSG00000189221.11	ENST00000338702.4	3931	15	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_13	5.71473212541989	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGACTCGACTCCTGTAT	43655912	True	NA	19	True	AATAAA	-19	NA	43656298	43746817	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_43656415_43683512_43683608_43693290_43693429_43711871_43711977_43712704_43712797_43728172_43728315_43731240_43731391_43731693_43731854_43732698_43732796_43736226_43736281_43740680_43740739_43741949_43742048_43743793_43743906_43744108_43744172_43744366
transcript_202736.known	chrX	-	2570	15	FSM	ENSG00000069535.14	ENST00000378069.5	2570	15	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	2.81848852242127	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTGTCCTTTCTTTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	43882450	43766609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_43767619_43768653_43768717_43769306_43769419_43775174_43775273_43778681_43778740_43780341_43780396_43781447_43781545_43793418_43793579_43795738_43795889_43797124_43797267_43802171_43802264_43803299_43803405_43838867_43839006_43843669_43843765_43882253
transcript_202739.known	chrX	-	1054	5	FSM	ENSG00000069509.6	ENST00000378045.5	1054	5	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_4	31.855140872393	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAATTTTTATGTTGTTT	NA	False	NA	-4	True	ATTAAA	-33	NA	44542859	44523638	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_44524276_44527236_44527366_44538466_44538543_44541944_44542102_44542804
transcript_202745.known	chrX	+	5761	29	FSM	ENSG00000147050.17	ENST00000377967.9	5761	29	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	67.861456629801	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTAGTATAATAGTAGAAAA	44872515	True	NA	7	True	AATAAA	-16	NA	44873187	45112602	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_44873713_44873923_44873988_44961283_44961393_44974665_44974716_45010960_45011020_45020609_45020731_45034930_45034986_45037654_45037690_45051708_45051803_45053828_45053956_45059005_45059105_45059246_45059467_45060021_45060157_45061323_45061420_45062646_45062749_45063421_45063818_45069578_45070358_45076696_45076827_45078399_45078506_45079145_45079352_45082575_45082641_45082714_45082790_45083459_45083609_45085864_45085980_45089742_45089931_45090722_45090865_45107409_45107537_45110078_45110250_45111381
transcript_20275.known	chr1	+	1446	4	FSM	ENSG00000143740.15	ENST00000366760.5	1446	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	150.906151851628	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGGTTTTTGAAGATGGG	227728328	True	NA	15	True	AATAAA	-18	NA	227728656	227781226	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_227728787_227758994_227759486_227766958_227767084_227780526
transcript_202759.nnic	chrX	+	4797	27	NNC	ENSG00000147050.17	novel	7459	24	NA	NA	-66949	-75	intron_retention	FALSE	canonical	3	93	junction_13	50.9068211330252	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTTCTATTGTTTGAGT	44948858	True	NA	36	True	ATTAAA	-18	NA	44951116	45112250	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_44951196_44961283_44961393_44974665_44974716_45010960_45011020_45020609_45020731_45034930_45034986_45037654_45037690_45051708_45051803_45053828_45053956_45059005_45059105_45059246_45059467_45060021_45060157_45061323_45061420_45063421_45063818_45069578_45070358_45076696_45076827_45078399_45078506_45079145_45079352_45082575_45082641_45082714_45082790_45083459_45083609_45085864_45085980_45089742_45089931_45090722_45090865_45107409_45107537_45110078_45110250_45111381
transcript_20276.known	chr1	+	1363	4	FSM	ENSG00000143740.15	ENST00000681929.1	1363	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	144.319860803086	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAAATGCTGGCTTCAGA	227732483	True	NA	-3	True	NA	NA	NA	227735434	227781208	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_227735500_227758994_227759486_227766958_227767084_227780526
transcript_202769.known	chrX	+	5599	28	FSM	ENSG00000147050.17	ENST00000675577.1	5599	28	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	66.3026688433249	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTATTGTTAAGTTGCA	44872515	True	NA	20	True	AATATA	-36	NA	44873187	45112542	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_44873713_44873923_44873988_44961283_44961393_44974665_44974716_45010960_45011020_45020609_45020731_45034930_45034986_45037654_45037690_45051708_45051803_45053828_45053956_45059005_45059105_45059246_45059467_45060021_45060157_45061323_45061420_45063421_45063818_45069578_45070358_45076696_45076827_45078399_45078506_45079145_45079352_45082575_45082641_45082714_45082790_45083459_45083609_45085864_45085980_45089742_45089931_45090722_45090865_45107409_45107537_45110078_45110250_45111381
transcript_20277.known	chr1	+	2375	3	FSM	ENSG00000143740.15	ENST00000480897.5	2375	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	2	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	227728210	True	NA	NA	False	NA	NA	NA	227728538	227734352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_227728787_227731584_227731748_227732388
transcript_202773.known	chrX	-	1458	3	FSM	ENSG00000231566.3	ENST00000456532.2	1458	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	4.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAACACTTACCAGTAGAA	NA	False	NA	NA	False	AAAAAG	-13	NA	45851541	45847041	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_45848214_45849374_45849473_45851353
transcript_202776.known	chrX	-	689	2	FSM	ENSG00000231566.3	ENST00000666464.2	692	2	3	0	3	0	multi-exon	FALSE	canonical	2	13	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTTGGCTGGGTGTGG	NA	False	NA	NA	False	NA	NA	NA	45851532	45848962	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_45849473_45851353
transcript_202782.known	chrX	+	1354	6	FSM	ENSG00000147121.16	ENST00000298190.10	1354	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	19.4586741583285	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGACAGAGTCTTGCTC	46446538	True	NA	NA	False	NA	NA	NA	46447291	46473669	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_46447347_46448199_46448311_46450430_46450476_46462747_46462875_46463197_46463294_46472749
transcript_202784.known	chrX	+	2334	6	FSM	ENSG00000147121.16	ENST00000344302.9	2334	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	24.0283166285115	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTATTTATTTATTTT	46446543	True	NA	16	True	AATAAA	-16	NA	46447296	46474639	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_46447347_46448199_46448311_46450430_46450476_46462747_46462875_46463197_46463309_46472749
transcript_202788.known	chrX	+	2078	2	FSM	ENSG00000230844.3	ENST00000421685.2	2078	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTTTTGTGAAAATACTT	46544793	True	NA	NA	False	AATATA	-20	NA	46545492	46548408	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_46545628_46546465
transcript_202790.nnic	chrX	+	869	3	Fusion	ENSG00000230844.3_ENSG00000147119.4	novel	2078	2	NA	NA	0	-96	multi-exon	FALSE	canonical	3	22	junction_1	1.5	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGGATTTGTTTTGTTT	46544793	True	NA	21	True	ATTAAA	-21	NA	46545492	46598400	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chrX_+_46545628_46563258_46563352_46597759
transcript_202791.nnic	chrX	+	2428	2	NNC	ENSG00000147119.4	novel	2396	2	NA	NA	-297	27238	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACATGGAGGGCAAAAGAG	NA	False	NA	NA	False	AATAGA	-41	NA	46573467	46625734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_46575424_46625262
transcript_202792.known	chrX	+	2396	2	FSM	ENSG00000147119.4	ENST00000276055.4	2396	2	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTGGGTTTAAGAATTT	46572238	True	NA	117	True	AAGAAA	-4	NA	46573764	46598496	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_46575424_46597759
transcript_202798.known	chrX	-	3838	17	FSM	ENSG00000065923.10	ENST00000328306.4	3838	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_10	10.5131985499181	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGAGTTTCTCTTAATGT	NA	False	NA	NA	False	AATACA	-20	NA	46759055	46605317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_46607204_46613288_46613395_46620976_46621060_46631585_46631650_46635588_46635649_46643235_46643390_46648685_46648798_46651109_46651224_46651315_46651405_46653608_46653724_46662027_46662158_46662537_46662644_46669606_46669720_46672550_46672628_46679677_46679756_46682335_46682536_46758704
transcript_202801.known	chrX	+	3700	5	FSM	ENSG00000102218.6	ENST00000218340.4	3700	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	15.945218719102	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGCAATGGTTTGTATA	46835427	True	NA	99	True	AATAAA	-18	NA	46837042	46882358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_46837203_46853475_46854142_46859987_46860103_46877504_46877591_46879685
transcript_202802.known	chrX	+	4713	11	FSM	ENSG00000102221.14	ENST00000611250.4	4713	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	19.5386795869117	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTGTCAGTGTGTTTTT	46912175	True	NA	15	True	ATTAAA	-16	NA	46912275	47061242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_46912341_46984883_46984941_46985712_46985793_46998119_46998278_47024723_47024915_47027891_47028104_47033620_47033789_47038948_47039066_47054157_47054629_47056081_47056200_47058166
transcript_202803.known	chrX	+	4947	11	FSM	ENSG00000102221.14	ENST00000614628.5	4947	11	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	11.7477657450257	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTGTCAGTGTGTTTTT	46912369	True	NA	15	True	ATTAAA	-16	NA	46912420	47061242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_46912720_46984883_46984941_46985712_46985793_46998119_46998278_47024723_47024915_47027891_47028104_47033620_47033789_47038948_47039066_47054157_47054629_47056081_47056200_47058166
transcript_202804.known	chrX	+	1611	7	FSM	ENSG00000130988.13	ENST00000352078.8	1611	7	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_4	8.5374989832438	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGTTCCTTTTTATTT	47078252	True	NA	26	True	AATAAA	-20	NA	47078379	47093313	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_47078710_47081129_47081308_47084417_47084601_47089775_47089992_47091677_47091810_47092060_47092216_47092896
transcript_202807.known	chrX	-	586	3	FSM	ENSG00000147123.12	ENST00000377811.4	586	3	0	0	0	0	multi-exon	FALSE	canonical	3	1468	junction_1	246	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGCTAGTGTTGATTGTGT	NA	False	NA	-6	True	ATTAAA	-17	NA	47144702	47142215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_47142441_47142613_47142745_47144472
transcript_202808.known	chrX	-	948	3	FSM	ENSG00000147123.12	ENST00000687244.1	1525	3	428	149	-328	-4	multi-exon	FALSE	canonical	3	708	junction_1	626	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTCGCTAGTGTTGATT	NA	False	NA	-10	True	ATTAAA	-13	NA	47145038	47142219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_47142441_47142583_47142745_47144472
transcript_20281.known	chr1	+	2202	2	FSM	ENSG00000143740.15	ENST00000480265.1	2202	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	227728220	True	NA	NA	False	NA	NA	NA	227728548	227734352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_227728787_227732388
transcript_20282.known	chr1	+	1972	5	FSM	ENSG00000143761.16	ENST00000540651.5	1972	5	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_1	1114.55675046181	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGGCTCTCCAGTGCTTCC	228053141	True	NA	16	True	AATAAA	-17	NA	228082659	228099211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_228082851_228097077_228097263_228097341_228097453_228097590_228097716_228097851
transcript_202824.nic	chrX	+	3852	24	NIC	ENSG00000182872.16	novel	3397	24	NA	NA	-427	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	75.3935860444054	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGCCTCTCCTCTTTCT	47144748	True	NA	28	True	AATAAA	-17	NA	47144793	47186813	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_47145517_47147356_47147499_47169314_47169499_47171027_47171259_47173127_47173198_47175018_47175093_47176499_47176587_47179102_47179164_47179318_47179496_47179879_47180038_47180211_47180310_47180418_47180507_47181214_47181402_47181506_47181647_47181748_47181867_47181950_47182043_47182161_47182327_47185054_47185205_47185301_47185368_47185441_47185631_47185715_47185791_47186064_47186172_47186257_47186388_47186473
transcript_202829.known	chrX	+	3201	24	FSM	ENSG00000182872.16	ENST00000329236.8	3201	24	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	80.7281137856418	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTGGCCTCTCCTCTTTC	47145428	False	NA	27	True	AATAAA	-16	NA	47145446	47186812	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_47145517_47147356_47147499_47169314_47169499_47171027_47171259_47173127_47173198_47175018_47175093_47176499_47176587_47179102_47179164_47179318_47179496_47179879_47180041_47180211_47180310_47180418_47180507_47181214_47181402_47181506_47181647_47181748_47181867_47181950_47182043_47182161_47182327_47185054_47185205_47185301_47185368_47185441_47185631_47185715_47185791_47186064_47186172_47186257_47186388_47186473
transcript_20283.known	chr1	+	578	6	FSM	ENSG00000143761.16	ENST00000473949.5	578	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	1379.53200760258	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGCTGCACTCACTACGC	228053272	True	NA	NA	False	NA	NA	NA	228082790	228097894	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_228082851_228096450_228096505_228097077_228097263_228097341_228097453_228097590_228097716_228097851
transcript_202841.nic	chrX	+	3846	24	NIC	ENSG00000182872.16	novel	3397	24	NA	NA	-452	0	combination_of_known_junctions	FALSE	canonical	3	185	junction_10	52.5689753035119	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGCCTCTCCTCTTTCT	NA	False	NA	28	True	AATAAA	-17	NA	47144768	47186813	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_47145486_47147356_47147499_47169314_47169499_47171027_47171259_47173127_47173198_47175018_47175093_47176499_47176587_47179102_47179164_47179318_47179496_47179879_47180038_47180211_47180310_47180418_47180507_47181214_47181402_47181506_47181647_47181748_47181867_47181950_47182043_47182161_47182327_47185054_47185205_47185301_47185368_47185441_47185631_47185715_47185791_47186064_47186172_47186257_47186388_47186473
transcript_202846.known	chrX	+	3397	24	FSM	ENSG00000182872.16	ENST00000377604.8	3397	24	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_10	60.392071238127	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGCCTCTCCTCTTTCT	47136000	True	NA	28	True	AATAAA	-17	NA	47145220	47186813	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_47145486_47147356_47147499_47169314_47169499_47171027_47171259_47173127_47173198_47175018_47175093_47176499_47176587_47179102_47179164_47179318_47179496_47179879_47180041_47180211_47180310_47180418_47180507_47181214_47181402_47181506_47181647_47181748_47181867_47181950_47182043_47182161_47182327_47185054_47185205_47185301_47185368_47185441_47185631_47185715_47185791_47186064_47186172_47186257_47186388_47186473
transcript_202881.known	chrX	+	3105	23	FSM	ENSG00000182872.16	ENST00000628161.2	3105	23	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	80.3714645508565	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGCCTCTCCTCTTTCT	47136058	True	NA	28	True	AATAAA	-17	NA	47145278	47186813	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_47145486_47147356_47147499_47169314_47169499_47173127_47173198_47175018_47175093_47176499_47176587_47179102_47179164_47179318_47179496_47179879_47180038_47180211_47180310_47180418_47180507_47181214_47181402_47181506_47181647_47181748_47181867_47181950_47182043_47182161_47182327_47185054_47185205_47185301_47185368_47185441_47185631_47185715_47185791_47186064_47186172_47186257_47186388_47186473
transcript_202882.known	chrX	+	3108	23	FSM	ENSG00000182872.16	ENST00000345781.10	3108	23	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	85.6794429378994	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGCCTCTCCTCTTTCT	47136058	True	NA	28	True	AATAAA	-17	NA	47145278	47186813	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_47145486_47147356_47147499_47169314_47169499_47173127_47173198_47175018_47175093_47176499_47176587_47179102_47179164_47179318_47179496_47179879_47180041_47180211_47180310_47180418_47180507_47181214_47181402_47181506_47181647_47181748_47181867_47181950_47182043_47182161_47182327_47185054_47185205_47185301_47185368_47185441_47185631_47185715_47185791_47186064_47186172_47186257_47186388_47186473
transcript_20291.known	chr1	+	1840	5	FSM	ENSG00000143761.16	ENST00000272102.10	1840	5	0	0	0	0	multi-exon	FALSE	canonical	3	1992	junction_1	381.618919866403	2189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCTCTCCAGTGCTTCCA	228053189	True	NA	17	True	AATAAA	-18	NA	228082707	228099212	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_228082766_228097077_228097263_228097341_228097453_228097590_228097716_228097851
transcript_202913.nic	chrX	+	2440	18	NIC	ENSG00000182872.16	novel	3201	24	NA	NA	-19	-1705	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	73.367020678118	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCAAAAATAGCTTCCAGC	47135981	True	NA	NA	False	AAAAAG	-5	NA	47145201	47185107	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_47145517_47147356_47147499_47169314_47169499_47171027_47171259_47173127_47173198_47175018_47175093_47176499_47176587_47179102_47179164_47179318_47179496_47179879_47180038_47180211_47180310_47180418_47180507_47181214_47181402_47181506_47181647_47181748_47181867_47181950_47182043_47182161_47182327_47185054
transcript_202921.nic	chrX	+	2842	18	NIC	ENSG00000182872.16	novel	3397	24	NA	NA	-452	-1705	combination_of_known_junctions	TRUE	canonical	3	185	junction_10	44.3896711699286	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCAAAAATAGCTTCCAGC	NA	False	NA	NA	False	AAAAAG	-5	NA	47144768	47185107	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_47145486_47147356_47147499_47169314_47169499_47171027_47171259_47173127_47173198_47175018_47175093_47176499_47176587_47179102_47179164_47179318_47179496_47179879_47180038_47180211_47180310_47180418_47180507_47181214_47181402_47181506_47181647_47181748_47181867_47181950_47182043_47182161_47182327_47185054
transcript_202923.nic	chrX	+	2845	18	ISM	ENSG00000182872.16	ENST00000377604.8	3397	24	-452	1706	-452	-1705	5prime_fragment	FALSE	canonical	3	120	junction_10	54.8182905853417	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCAAAAATAGCTTCCAGC	NA	False	NA	NA	False	AAAAAG	-5	NA	47144768	47185107	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_47145486_47147356_47147499_47169314_47169499_47171027_47171259_47173127_47173198_47175018_47175093_47176499_47176587_47179102_47179164_47179318_47179496_47179879_47180041_47180211_47180310_47180418_47180507_47181214_47181402_47181506_47181647_47181748_47181867_47181950_47182043_47182161_47182327_47185054
transcript_20293.known	chr1	+	820	5	FSM	ENSG00000143761.16	ENST00000470558.5	820	5	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_1	1114.55675046181	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTTTTGTTTCCAATGA	228053270	True	NA	NA	False	NA	NA	NA	228082788	228098188	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_228082851_228097077_228097263_228097341_228097453_228097590_228097716_228097851
transcript_20296.known	chr1	+	597	5	FSM	ENSG00000143761.16	ENST00000482962.5	597	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1226.8303417751	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTGCACTCACTACGCCA	228083181	False	NA	NA	False	NA	NA	NA	228083221	228097896	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_228083353_228097077_228097263_228097341_228097453_228097590_228097716_228097851
transcript_202963.nic	chrX	+	3665	27	NIC	ENSG00000130985.17	novel	3572	26	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_1	354.888016757216	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCGCCTGCCCTGCTGGTT	47193755	False	NA	14	True	AATAAA	-17	NA	47193782	47215128	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_47194025_47198308_47198356_47198802_47198920_47199047_47199107_47199208_47199378_47199479_47199615_47200893_47201001_47201275_47201367_47201477_47201611_47202155_47202254_47202357_47202505_47202637_47202815_47202942_47203048_47203133_47203215_47203540_47203697_47205947_47206114_47206247_47206445_47209622_47209688_47209927_47210124_47210841_47210917_47211035_47211226_47212423_47212513_47212770_47212864_47212989_47213182_47214326_47214429_47214536_47214638_47214793
transcript_202967.nic	chrX	+	3788	27	NIC	ENSG00000130985.17	novel	3572	26	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	358.304306883633	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCGCCTGCCCTGCTGGTT	47180081	True	NA	14	True	AATAAA	-17	NA	47193801	47215128	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_47194025_47198166_47198356_47198802_47198920_47199047_47199107_47199208_47199378_47199479_47199615_47200893_47201001_47201275_47201367_47201477_47201611_47202155_47202254_47202357_47202505_47202637_47202815_47202942_47203048_47203133_47203215_47203540_47203697_47205947_47206114_47206247_47206445_47209622_47209688_47209927_47210124_47210841_47210917_47211035_47211226_47212423_47212513_47212770_47212864_47212989_47213182_47214326_47214429_47214536_47214638_47214793
transcript_20298.known	chr1	+	2006	5	FSM	ENSG00000143761.16	ENST00000541182.1	2006	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1226.39991438356	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGGCTCTCCAGTGCTTCC	228083109	False	NA	16	True	AATAAA	-17	NA	228083149	228099211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_228083375_228097077_228097263_228097341_228097453_228097590_228097716_228097851
transcript_202984.known	chrX	+	3466	26	FSM	ENSG00000130985.17	ENST00000377351.8	3466	26	0	0	0	0	multi-exon	TRUE	canonical	3	275	junction_1	269.732774426839	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCGCCTGCCCTGCTGGTT	47187734	True	NA	14	True	AATAAA	-17	NA	47190860	47215128	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_47190951_47198802_47198920_47199047_47199107_47199208_47199378_47199479_47199615_47200893_47201001_47201275_47201367_47201477_47201611_47202155_47202254_47202357_47202505_47202637_47202815_47202942_47203048_47203133_47203215_47203540_47203697_47205947_47206114_47206247_47206445_47209622_47209688_47209927_47210124_47210841_47210917_47211035_47211226_47212423_47212513_47212770_47212864_47212989_47213182_47214326_47214429_47214536_47214638_47214793
transcript_20299.known	chr1	+	678	5	FSM	ENSG00000143761.16	ENST00000469235.5	678	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1227.26077098553	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCGGCGACGGGCTCTAT	228083109	False	NA	NA	False	NA	NA	NA	228083149	228097948	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_228083310_228097077_228097263_228097341_228097453_228097590_228097716_228097851
transcript_202993.known	chrX	+	3572	26	FSM	ENSG00000130985.17	ENST00000335972.11	3572	26	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_1	238.456959638422	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCGCCTGCCCTGCTGGTT	47180108	True	NA	14	True	AATAAA	-17	NA	47193828	47215128	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_47194025_47198802_47198920_47199047_47199107_47199208_47199378_47199479_47199615_47200893_47201001_47201275_47201367_47201477_47201611_47202155_47202254_47202357_47202505_47202637_47202815_47202942_47203048_47203133_47203215_47203540_47203697_47205947_47206114_47206247_47206445_47209622_47209688_47209927_47210124_47210841_47210917_47211035_47211226_47212423_47212513_47212770_47212864_47212989_47213182_47214326_47214429_47214536_47214638_47214793
transcript_203.known	SIRV6	+	1435	9	FSM	SIRV6A	SIRV601	1435	9	0	0	0	0	multi-exon	TRUE	canonical	3	2387	junction_3	9022.52467352542	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGACCGGGAGTATACTT	NA	False	NA	NA	False	NA	NA	NA	1000	11826	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV6_+_1187_1468_1535_1640_1736_2470_2621_2740_2829_3106_3165_10724_10819_11031_11109_11205
transcript_2030.known	chr1	-	3695	21	FSM	ENSG00000171680.23	ENST00000535355.6	3695	21	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_20	25.6633980602725	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGAAGAGTCCTTTGCTT	-6485273	True	NA	-12	True	TATAAA	-18	NA	6485469	6467121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6467573_6467824_6468587_6469041_6469242_6469334_6469451_6469543_6469677_6470235_6470356_6470505_6470644_6470734_6470885_6470989_6471101_6471487_6471638_6471757_6471809_6472526_6472623_6472985_6473175_6473250_6473455_6474012_6474165_6474450_6474588_6475046_6475139_6475461_6475523_6475930_6476037_6477528_6477659_6485323
transcript_203028.nic	chrX	+	2231	17	NIC	ENSG00000102225.17	novel	3151	16	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	277.99932553875	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGTCTGTCTGTCTCTG	47211377	True	NA	26	True	NA	NA	NA	47218675	47228990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_47219106_47222260_47222343_47223551_47223760_47224384_47224519_47224617_47224744_47224833_47224891_47224987_47225103_47225771_47225867_47225964_47226028_47226278_47226403_47226582_47226704_47226811_47226910_47226993_47227100_47227180_47227224_47227378_47227470_47228566_47228645_47228730
transcript_203029.nic	chrX	+	3238	17	NIC	ENSG00000102225.17	novel	3151	16	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	277.99932553875	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCTTGCAAATCCCTGT	47211377	True	NA	15	True	ATTAAA	-17	NA	47218675	47229997	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_47219106_47222260_47222343_47223551_47223760_47224384_47224519_47224617_47224744_47224833_47224891_47224987_47225103_47225771_47225867_47225964_47226028_47226278_47226403_47226582_47226704_47226811_47226910_47226993_47227100_47227180_47227224_47227378_47227470_47228566_47228645_47228730
transcript_203042.known	chrX	+	3158	16	FSM	ENSG00000102225.17	ENST00000457458.6	3158	16	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	204.708855586551	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCTTGCAAATCCCTGT	47217376	True	NA	15	True	ATTAAA	-17	NA	47218232	47229997	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_47218665_47223551_47223760_47224384_47224519_47224617_47224744_47224833_47224891_47224987_47225103_47225771_47225867_47225964_47226028_47226278_47226403_47226582_47226704_47226811_47226910_47226993_47227100_47227180_47227224_47227378_47227470_47228566_47228645_47228730
transcript_20305.known	chr1	+	712	4	FSM	ENSG00000143761.16	ENST00000470670.5	712	4	0	0	0	0	multi-exon	FALSE	canonical	3	1992	junction_1	394.334319525394	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCACTCCTCTTGCCCT	228053211	True	NA	NA	False	NA	NA	NA	228082729	228098027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_228082766_228097077_228097453_228097590_228097716_228097851
transcript_203058.known	chrX	+	3151	16	FSM	ENSG00000102225.17	ENST00000357227.9	3151	16	0	0	0	0	multi-exon	FALSE	canonical	3	669	junction_1	66.2696176405313	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCTTGCAAATCCCTGT	47211382	True	NA	15	True	ATTAAA	-17	NA	47218680	47229997	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_47219106_47223551_47223760_47224384_47224519_47224617_47224744_47224833_47224891_47224987_47225103_47225771_47225867_47225964_47226028_47226278_47226403_47226582_47226704_47226811_47226910_47226993_47227100_47227180_47227224_47227378_47227470_47228566_47228645_47228730
transcript_203067.known	chrX	+	3196	21	FSM	ENSG00000102226.10	ENST00000377107.7	3196	21	0	0	0	0	multi-exon	FALSE	canonical	3	484	junction_4	54.7231897827603	2121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGCAGTGTGGTTTTTTC	47230777	True	NA	19	True	TATAAA	-19	NA	47233008	47248328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_47233220_47239069_47239180_47239350_47239482_47239789_47239908_47240304_47240451_47240586_47240649_47240773_47240877_47241276_47241451_47241540_47241700_47242081_47242307_47242438_47242523_47242625_47242721_47243395_47243603_47244497_47244551_47244681_47244925_47245015_47245087_47245369_47245483_47247071_47247222_47247303_47247420_47247610_47247700_47247792
transcript_20307.known	chr1	-	1290	8	FSM	ENSG00000143793.13	ENST00000272139.5	1290	8	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_4	31.5413560719437	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATATCAAATTGGAAGGT	-228097944	True	NA	-8	True	AATAAA	-17	NA	228103325	228100730	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_228101255_228101338_228101474_228102079_228102166_228102309_228102383_228102477_228102561_228102642_228102689_228102898_228103050_228103133
transcript_203076.nic	chrX	+	2745	21	NIC	ENSG00000102226.10	novel	804	7	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	129.312644393346	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGCCCT	47231166	False	NA	-12	True	NA	NA	NA	47233397	47247952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_47233534_47239069_47239180_47239350_47239482_47239789_47239908_47240304_47240451_47240586_47240649_47240773_47240877_47241276_47241451_47241540_47241700_47242081_47242307_47242438_47242523_47242625_47242721_47243395_47243603_47244497_47244551_47244681_47244925_47245015_47245087_47245369_47245483_47247071_47247222_47247303_47247420_47247610_47247700_47247792
transcript_203128.known	chrX	+	3338	21	FSM	ENSG00000102226.10	ENST00000218348.7	3338	21	0	0	0	0	multi-exon	TRUE	canonical	3	484	junction_4	54.7231897827603	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAGCAGTGTGGTTTTTT	47232851	False	NA	18	True	TATAAA	-18	NA	47232865	47248327	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_47233220_47239069_47239180_47239350_47239482_47239789_47239908_47240304_47240451_47240586_47240649_47240773_47240877_47241276_47241451_47241540_47241700_47242081_47242307_47242438_47242523_47242625_47242721_47243395_47243603_47244497_47244551_47244681_47244925_47245015_47245087_47245369_47245483_47247071_47247222_47247303_47247420_47247610_47247700_47247792
transcript_20313.known	chr1	-	1429	7	FSM	ENSG00000143793.13	ENST00000485896.5	1429	7	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_3	30.592301137523	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATATCAAATTGGAAGGT	-228097939	True	NA	-8	True	AATAAA	-17	NA	228103320	228100730	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_228101255_228101338_228101474_228102079_228102383_228102477_228102561_228102642_228102689_228102898_228103050_228103133
transcript_203131.known	chrX	-	4297	5	FSM	ENSG00000147124.13	ENST00000313116.11	4297	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	14.4913767461894	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTTTAGCATCTGTCTT	NA	False	NA	NA	False	TATAAA	-35	NA	47482585	47445878	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_47449475_47455920_47456017_47456271_47456399_47467409_47467761_47482458
transcript_203134.known	chrX	-	4531	5	FSM	ENSG00000147124.13	ENST00000377065.8	4531	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	20.6155281280883	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTTTAGCATCTGTCTT	NA	False	NA	NA	False	TATAAA	-35	NA	47482946	47445878	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_47449475_47455920_47456017_47456271_47456399_47467409_47467761_47482585
transcript_203139.known	chrX	+	2378	16	FSM	ENSG00000078061.14	ENST00000377045.9	2378	16	0	0	0	0	multi-exon	FALSE	non_canonical	2	193	junction_12	41.4549822766282	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTTGTTTATTTTGTT	47556737	True	NA	28	True	NA	NA	NA	47561204	47571908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_47561252_47562908_47563064_47563225_47563330_47564796_47564900_47564984_47565140_47565251_47565351_47566638_47566781_47566883_47566912_47566985_47567132_47567229_47567433_47568717_47568895_47568986_47569034_47569538_47569658_47569892_47570025_47570877_47571013_47571322
transcript_20314.nic	chr1	-	808	7	ISM	ENSG00000143793.13	ENST00000272139.5	1290	8	-116	682	0	0	5prime_fragment	FALSE	canonical	3	311	junction_3	27.6932603112502	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAGAAGAAGAAGAAAGA	-228103431	False	NA	33	True	AAAAAG	-19	NA	228103441	228101412	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_228101474_228102079_228102166_228102309_228102383_228102477_228102561_228102642_228102689_228102898_228103050_228103133
transcript_203140.known	chrX	-	3172	13	FSM	ENSG00000008056.14	ENST00000340666.5	3172	13	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	6.43503863408933	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTCTGTGCTTCTTGGTG	NA	False	NA	-1	True	AATAAA	-18	NA	47619857	47571900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_47572962_47574001_47574591_47574687_47574776_47575127_47575275_47576130_47576234_47576331_47576407_47576497_47576641_47577438_47577502_47604977_47605068_47605222_47605380_47606944_47607037_47607140_47607199_47619351
transcript_203141.known	chrX	-	3210	13	FSM	ENSG00000008056.14	ENST00000295987.13	3210	13	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	10.1447851956888	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTCTGTGCTTCTTGGTG	NA	False	NA	-1	True	AATAAA	-18	NA	47619857	47571900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_47573000_47574001_47574591_47574687_47574776_47575127_47575275_47576130_47576234_47576331_47576407_47576497_47576641_47577438_47577502_47604977_47605068_47605222_47605380_47606944_47607037_47607140_47607199_47619351
transcript_203143.known	chrX	-	2489	9	FSM	ENSG00000126759.14	ENST00000396992.8	2489	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	2.91547594742265	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAGTGCTTTTAGCATTT	NA	False	NA	NA	False	AGTAAA	-16	NA	47629930	47623281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_47624441_47626057_47626170_47626327_47626520_47626772_47626947_47627140_47627333_47627470_47627642_47628101_47628278_47629523_47629675_47629768
transcript_203144.known	chrX	+	1271	6	FSM	ENSG00000078061.14	ENST00000377039.2	1271	6	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	30.6659420204239	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGAGTGTATGTGCATTA	47556754	True	NA	NA	False	AATAAA	-20	NA	47561221	47565975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_47561252_47562908_47563064_47563225_47563330_47564796_47564900_47564984_47565140_47565251
transcript_203146.known	chrX	+	769	6	FSM	ENSG00000102265.12	ENST00000218388.9	769	6	0	0	0	0	multi-exon	FALSE	canonical	3	413	junction_4	26.2800304413827	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACTGTTTCTGTGTAGTG	47578770	True	NA	12	True	AATAAA	-17	NA	47582435	47586789	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_47582475_47583407_47583537_47584935_47585016_47585204_47585332_47585542_47585668_47586520
transcript_203148.known	chrX	+	626	5	FSM	ENSG00000102265.12	ENST00000377017.5	626	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	195.11198707409	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACTGTTTCTGTGTAGTG	47578784	False	NA	12	True	AATAAA	-17	NA	47582449	47586789	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_47582475_47584935_47585016_47585204_47585332_47585542_47585668_47586520
transcript_203152.known	chrX	-	2876	7	FSM	ENSG00000126767.18	ENST00000376983.8	2876	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	59.3784940492394	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGAGGCTGCTGGCACT	NA	False	NA	-5	True	AATATA	-16	NA	47650563	47635520	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_47636928_47637012_47637115_47637750_47638183_47638894_47639339_47641231_47641476_47649920_47650027_47650422
transcript_203155.known	chrX	-	736	6	FSM	ENSG00000126767.18	ENST00000343894.8	736	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	72.2274186164783	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCCCTTCTGGGGTCACT	NA	False	NA	NA	False	NA	NA	NA	47650591	47636810	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_47636928_47637012_47637053_47639278_47639339_47641231_47641476_47649920_47650027_47650422
transcript_203156.known	chrX	-	2695	6	FSM	ENSG00000126767.18	ENST00000247161.7	2695	6	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_5	21.4326853193901	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGAGGCTGCTGGCACT	NA	False	NA	-5	True	AATATA	-16	NA	47650488	47635520	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_47636928_47637012_47637115_47637750_47638183_47638894_47639339_47641231_47641476_47650422
transcript_203161.known	chrX	-	574	7	FSM	ENSG00000126756.12	ENST00000333119.7	574	7	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_6	77.8388648997973	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCACATGGCCCTTCTTT	NA	False	NA	-6	True	ATTAAA	-17	NA	47659161	47651797	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_47651896_47652080_47652145_47657182_47657291_47657571_47657640_47657781_47657864_47658829_47658937_47659114
transcript_203167.known	chrX	-	773	6	FSM	ENSG00000126756.12	ENST00000335890.3	773	6	0	0	0	0	multi-exon	FALSE	canonical	3	537	junction_5	37.4838631947135	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACATGGCCCTTCTTTTT	NA	False	NA	-4	True	ATTAAA	-19	NA	47659180	47651795	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_47651896_47652080_47652145_47657182_47657291_47657571_47657640_47657781_47657864_47658829
transcript_203171.known	chrX	-	3586	7	FSM	ENSG00000147118.12	ENST00000396965.5	3586	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_6	14.8483070490283	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTTTTACTGTTATAG	NA	False	NA	-10	True	AATAAA	-15	NA	48003978	47974851	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_47977798_47982948_47983039_47983284_47983412_47988523_47988618_48002594_48002654_48003507_48003703_48003903
transcript_203174.known	chrX	-	3499	6	FSM	ENSG00000147118.12	ENST00000376943.8	3499	6	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_5	14.3721953785773	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTACTGTTATAGT	NA	False	NA	-9	True	AATAAA	-16	NA	48003989	47974850	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_47977798_47982948_47983039_47983284_47983412_48002594_48002654_48003507_48003703_48003908
transcript_203178.known	chrX	-	2791	5	FSM	ENSG00000221994.12	ENST00000442455.8	2791	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.53834841531101	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTGTTGTTTGGTCAT	NA	False	NA	1	True	AATAAA	-24	NA	48071658	48058213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_48060200_48060449_48060546_48060818_48060946_48066871_48067062_48071266
transcript_203181.nic	chrX	-	1929	16	NIC	ENSG00000017483.16	novel	1990	17	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_15	57.7066913123792	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGACTCAGCCTTCTGA	NA	False	NA	-12	True	AATAAA	-16	NA	48468424	48458543	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_48459035_48459535_48459640_48459731_48459877_48460648_48460765_48460985_48461087_48461717_48461798_48462006_48462145_48462232_48462292_48462897_48462981_48466014_48466094_48466229_48466323_48466798_48466873_48466961_48467078_48467709_48467786_48467871_48467926_48468304
transcript_203184.nic	chrX	-	2012	16	NIC	ENSG00000017483.16	novel	1990	17	NA	NA	-70	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_15	56.5773413616755	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGACTCAGCCTTCTGA	NA	False	NA	-12	True	AATAAA	-16	NA	48469087	48458543	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_48459035_48459535_48459640_48459731_48459877_48460648_48460765_48460985_48461087_48461717_48461798_48462006_48462145_48462232_48462292_48462897_48462981_48466014_48466094_48466229_48466323_48466798_48466873_48466961_48467078_48467709_48467786_48467871_48467926_48468884
transcript_203187.known	chrX	-	1990	17	FSM	ENSG00000017483.16	ENST00000620913.5	1990	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	62.2926247139258	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGACTCAGCCTTCTGA	NA	False	NA	-12	True	AATAAA	-16	NA	48470260	48458543	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_48459035_48459535_48459640_48459731_48459877_48460648_48460765_48460985_48461087_48461717_48461798_48462006_48462145_48462232_48462292_48462897_48462981_48466014_48466094_48466229_48466323_48466798_48466873_48466961_48467078_48467709_48467786_48467871_48467926_48469334_48469437_48470181
transcript_203190.known	chrX	+	1986	14	FSM	ENSG00000068438.15	ENST00000019019.6	1986	14	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	104.786568089956	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAATTTTGTTTCAATTT	48473687	True	NA	16	True	ATTAAA	-20	NA	48476160	48486299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48476397_48476562_48476669_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482408_48482507_48482596_48482795_48482985_48483028_48485735
transcript_203193.known	chrX	+	1899	13	FSM	ENSG00000068438.15	ENST00000348411.3	1899	13	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_9	41.1713054066651	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTTCCATTGTAATTGT	48473725	True	NA	14	True	AATATA	-26	NA	48476198	48486350	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48476397_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482402_48482507_48482596_48482795_48482985_48483028_48485735
transcript_203195.nic	chrX	+	1900	13	NIC	ENSG00000068438.15	novel	1986	14	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	104	junction_9	54.0509019351204	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAATTTTGTTTCAATTT	48476111	False	NA	16	True	ATTAAA	-20	NA	48476140	48486299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_48476397_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482408_48482507_48482596_48482795_48482985_48483028_48485735
transcript_2032.known	chr1	-	3668	21	FSM	ENSG00000171680.23	ENST00000400913.6	3668	21	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_20	25.4468072653526	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGAAGAGTCCTTTGCTT	-6485782	True	NA	-12	True	TATAAA	-18	NA	6485954	6467121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6467573_6467824_6468587_6469041_6469242_6469334_6469451_6469543_6469677_6470235_6470356_6470505_6470644_6470734_6470885_6470989_6471101_6471487_6471638_6471757_6471809_6472526_6472623_6472985_6473175_6473250_6473455_6474012_6474165_6474450_6474588_6475046_6475139_6475461_6475523_6475930_6476037_6477528_6477659_6485835
transcript_203200.nic	chrX	+	2242	12	NIC	ENSG00000068438.15	novel	1899	13	NA	NA	-25	0	intron_retention	FALSE	canonical	3	159	junction_9	40.8575432812009	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAATTTTGTTTCAATTT	NA	False	NA	16	True	ATTAAA	-20	NA	48475995	48486299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_48476397_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482402_48482507_48482596_48483028_48485735
transcript_203201.nic	chrX	+	2078	12	NIC	ENSG00000068438.15	novel	1986	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	104	junction_9	55.171408333671	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAATTTTGTTTCAATTT	48473680	True	NA	16	True	ATTAAA	-20	NA	48476153	48486299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_48476397_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482408_48482507_48482596_48483028_48485735
transcript_203207.nic	chrX	+	1418	11	ISM	ENSG00000068438.15	ENST00000348411.3	1899	13	-16	3396	-16	0	5prime_fragment	FALSE	canonical	3	159	junction_9	41.1107042021905	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGAGTCACTTTTCTTT	48473709	True	NA	31	True	TATAAA	-45	NA	48476182	48482954	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_48476397_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482402_48482507_48482596
transcript_203209.nic	chrX	+	1425	11	NIC	ENSG00000068438.15	novel	1986	14	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	104	junction_9	56.9160785718763	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGAGTCACTTTTCTTT	48473696	True	NA	31	True	TATAAA	-45	NA	48476169	48482954	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_48476397_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482408_48482507_48482596
transcript_20322.nic	chr1	-	867	6	ISM	ENSG00000143793.13	ENST00000485896.5	1429	7	-36	682	-31	0	5prime_fragment	FALSE	canonical	3	311	junction_2	27.4182421026586	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAGAAGAAGAAGAAAGA	-228097975	True	NA	33	True	AAAAAG	-19	NA	228103356	228101412	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_228101474_228102079_228102383_228102477_228102561_228102642_228102689_228102898_228103050_228103133
transcript_203233.known	chrX	+	1867	15	FSM	ENSG00000102312.24	ENST00000326194.11	1867	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	48.3908934762376	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCTTCTTCTTCACTGCT	48507826	True	NA	16	True	AATAAA	-17	NA	48508991	48520808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48509104_48509783_48509957_48511294_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48512834_48512853_48514126_48514142_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
transcript_203241.known	chrX	+	1848	14	FSM	ENSG00000102312.24	ENST00000355961.8	1848	14	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	40.8987782112326	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTTCACTGCTCAGAGG	48507836	True	NA	22	True	AATAAA	-23	NA	48509001	48520814	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48509104_48509783_48509957_48511294_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48512834_48512853_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
transcript_203242.known	chrX	+	1877	14	FSM	ENSG00000102312.24	ENST00000359882.8	1877	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	46.0615744308991	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGGCTTCTTCTTCACTG	48507796	True	NA	14	True	AATAAA	-15	NA	48508961	48520806	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48509104_48509783_48509957_48511294_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48514126_48514142_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
transcript_203246.nic	chrX	+	2232	13	NIC	ENSG00000102312.24	novel	2079	14	NA	NA	-5	0	intron_retention	FALSE	canonical	3	63	junction_2	25.7115408587921	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCTTCTTCTTCACTGCT	48507788	True	NA	16	True	AATAAA	-17	NA	48508953	48520808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_48509104_48509423_48509957_48511294_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
transcript_203254.known	chrX	+	3785	6	FSM	ENSG00000068354.16	ENST00000376771.9	3785	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	7.8587530817554	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGATGCATTCTGTGATTT	48538537	True	NA	13	True	AGTAAA	-15	NA	48539713	48562609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48539921_48541332_48541443_48544868_48545024_48558896_48559025_48559157_48559347_48559613
transcript_203258.known	chrX	+	796	5	FSM	ENSG00000147155.11	ENST00000498425.1	796	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	343.124157558164	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGCAAGAAGAACTGAGG	48514403	True	NA	NA	False	NA	NA	NA	48521804	48528439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48521908_48523753_48524073_48526988_48527026_48527154_48527286_48528233
transcript_203259.known	chrX	+	1125	5	FSM	ENSG00000147155.11	ENST00000495186.6	1125	5	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_1	242.846659437597	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGAGAGATCCTTAATTA	48514406	True	NA	15	True	AATAAA	-16	NA	48521807	48528716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48521908_48523698_48524073_48526988_48527026_48527154_48527286_48528233
transcript_203260.known	chrX	+	904	5	FSM	ENSG00000147155.11	ENST00000276096.10	904	5	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	349.160690084093	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTAACACTGAGAGATCCT	48514397	True	NA	9	True	AATAAA	-10	NA	48521798	48528710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48521908_48523922_48524073_48526988_48527026_48527154_48527286_48528233
transcript_203264.known	chrX	+	884	5	FSM	ENSG00000068354.16	ENST00000481090.6	884	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	19.8415599185145	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGTCCTACTGCCAGGG	48538560	True	NA	NA	False	NA	NA	NA	48539736	48559886	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48539921_48541332_48541443_48558896_48559025_48559157_48559347_48559613
transcript_203270.known	chrX	+	1375	8	FSM	ENSG00000102317.18	ENST00000466764.5	1375	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	265.222509587397	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGAGGCAGGAGAATCGC	48564398	True	NA	NA	False	NA	NA	NA	48574490	48577977	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48574574_48575167_48575284_48575560_48575668_48575814_48576084_48576313_48576420_48576507_48576605_48577025_48577110_48577464
transcript_203275.known	chrX	+	4298	7	FSM	ENSG00000102317.18	ENST00000376759.8	4298	7	0	0	0	0	multi-exon	TRUE	canonical	3	502	junction_1	48.1332063710237	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTATATTCGTTTTTTTAA	48564391	True	NA	12	True	AATAAA	-22	NA	48574483	48581162	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48574574_48575167_48575284_48575560_48575668_48576313_48576420_48576507_48576605_48577025_48577110_48577464
transcript_203282.known	chrX	+	724	6	FSM	ENSG00000102317.18	ENST00000489344.5	724	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	218.084020505859	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTAGCAATAATTGGTTCT	48564431	True	NA	NA	False	NA	NA	NA	48574523	48577735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48574574_48575167_48575284_48576313_48576420_48576507_48576605_48577025_48577110_48577464
transcript_203288.known	chrX	+	947	3	FSM	ENSG00000102317.18	ENST00000485213.1	947	3	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_1	29.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGCTCGGGGAACCAGA	48564443	True	NA	NA	False	NA	NA	NA	48574535	48576353	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48574574_48575167_48575284_48575560
transcript_203290.known	chrX	+	951	2	FSM	ENSG00000102317.18	ENST00000491240.5	951	2	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTCAGTCAAGATGTAAG	48564431	True	NA	NA	False	NA	NA	NA	48574523	48576068	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48574574_48575167
transcript_203291.known	chrX	-	549	2	FSM	ENSG00000204620.3	ENST00000376775.3	549	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGGTTTCACTGTGTTGGC	NA	False	NA	NA	False	NA	NA	NA	48574860	48568013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_48568181_48574478
transcript_203294.known	chrX	+	5457	10	FSM	ENSG00000101940.18	ENST00000376729.10	5457	10	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	25.0338043058719	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGCCTCGGTTAACTTG	48596158	True	NA	23	True	AATAAA	-38	NA	48597491	48608869	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48597615_48597957_48598038_48598716_48598958_48599352_48599463_48599586_48599718_48600318_48600627_48601783_48601965_48602064_48602207_48604271_48604391_48604847
transcript_203298.nic	chrX	+	1751	10	NIC	ENSG00000101940.18	novel	5457	10	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_2	44.1095717615537	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGACTCATTTGTGC	48596154	True	NA	25	True	NA	NA	NA	48597487	48605193	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_48597615_48597957_48598038_48598750_48598958_48599352_48599463_48599586_48599718_48600318_48600627_48601783_48601965_48602064_48602207_48604271_48604391_48604847
transcript_2033.known	chr1	-	3699	21	FSM	ENSG00000171680.23	ENST00000340850.10	3699	21	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_20	25.9986057318465	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGAAGAGTCCTTTGCTT	-6490103	False	491	-12	True	TATAAA	-18	NA	6490594	6467121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6467573_6467824_6468587_6469041_6469242_6469334_6469451_6469543_6469677_6470235_6470356_6470505_6470644_6470734_6470885_6470989_6471101_6471487_6471638_6471757_6471809_6472526_6472623_6472985_6473175_6473250_6473455_6474012_6474165_6474450_6474588_6475046_6475139_6475461_6475523_6475930_6476037_6477528_6477659_6490444
transcript_203300.nnic	chrX	+	1822	10	NNC	ENSG00000101940.18	novel	5457	10	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	47.9909970980926	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGACTCATTTGTGC	48596157	True	NA	25	True	NA	NA	NA	48597490	48605193	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_48597655_48597957_48598038_48598716_48598958_48599352_48599463_48599586_48599718_48600318_48600627_48601783_48601965_48602064_48602207_48604271_48604391_48604847
transcript_203310.known	chrX	+	2124	9	FSM	ENSG00000101940.18	ENST00000218056.9	2124	9	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	16.4620776331543	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGACTCATTTGTGC	48596158	True	NA	25	True	NA	NA	NA	48597491	48605193	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48598038_48598716_48598958_48599352_48599463_48599586_48599718_48600318_48600627_48601783_48601965_48602064_48602207_48604271_48604391_48604847
transcript_203314.known	chrX	+	1829	12	FSM	ENSG00000015285.11	ENST00000376701.5	1829	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	1.23983469972599	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTCTGTTTACATTCC	48683785	True	NA	NA	False	AATAAA	-28	NA	48683798	48691427	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48683986_48684282_48684424_48685546_48685634_48685733_48685837_48685945_48685988_48686080_48686135_48686780_48686956_48688053_48688097_48688299_48688454_48688659_48689067_48689319_48689435_48691106
transcript_203318.known	chrX	+	2736	6	FSM	ENSG00000101945.17	ENST00000376687.4	2736	6	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_5	15.357083056362	262	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGATGTGAGGTGCTTGT	48695986	True	NA	NA	False	AATAAA	-22	NA	48696733	48709016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48696804_48698901_48699048_48700090_48700754_48706264_48706412_48706497_48706628_48707436
transcript_203329.known	chrX	+	4118	29	FSM	ENSG00000094631.21	ENST00000334136.11	4118	29	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	28.4906671077547	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAGAAAGCTTTTTGAC	48800506	True	NA	28	True	AATAAA	-19	NA	48802066	48824976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48802143_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630_48805672_48806367_48806465_48806608_48806707_48808032_48808138_48808257_48808327_48814439_48814567_48814674_48814741_48814833_48814894_48814961_48815052_48815383_48815491_48815574_48815643_48815883_48816053_48816140_48816270_48816464_48816634_48817325_48817460_48818040_48818110_48818219_48818413_48820105_48820256_48822619_48822795_48822911_48823589_48823671_48823786_48823921_48824069_48824165_48824295_48824543
transcript_203332.known	chrX	+	4147	29	FSM	ENSG00000094631.21	ENST00000644068.1	4147	29	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	33.6717346491937	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAGAAAGCTTTTTGAC	48800607	True	NA	28	True	AATAAA	-19	NA	48802167	48824976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48802273_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630_48805672_48806367_48806465_48806608_48806707_48808032_48808138_48808257_48808327_48814439_48814567_48814674_48814741_48814833_48814894_48814961_48815052_48815383_48815491_48815574_48815643_48815883_48816053_48816140_48816270_48816464_48816634_48817325_48817460_48818040_48818110_48818219_48818413_48820105_48820256_48822619_48822795_48822911_48823589_48823671_48823786_48823921_48824069_48824165_48824295_48824543
transcript_203333.known	chrX	+	4099	29	FSM	ENSG00000094631.21	ENST00000643374.1	4099	29	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	33.912627832868	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGTACAAGCTGTTAAAAAA	48800598	True	NA	8	True	NA	NA	NA	48802158	48824956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48802236_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630_48805672_48806367_48806465_48806608_48806707_48808032_48808138_48808257_48808327_48814439_48814567_48814674_48814741_48814833_48814894_48814961_48815052_48815383_48815491_48815574_48815643_48815883_48816053_48816140_48816270_48816464_48816634_48817325_48817460_48818040_48818110_48818219_48818413_48820105_48820256_48822619_48822795_48822911_48823589_48823671_48823786_48823921_48824069_48824165_48824295_48824543
transcript_203336.nnic	chrX	+	4663	28	NNC	ENSG00000094631.21	novel	4118	29	NA	NA	-8	0	intron_retention	TRUE	canonical	0	0	junction_22	39.1967006814001	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAGAAAGCTTTTTGAC	48800465	True	NA	28	True	AATAAA	-19	NA	48802025	48824976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_48802143_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630_48805672_48806367_48806465_48806608_48806707_48808032_48808138_48808257_48808327_48814439_48814567_48814674_48814894_48814961_48815491_48815574_48815643_48815883_48816053_48816140_48816270_48816464_48816634_48817325_48817460_48818040_48818110_48818219_48818413_48820105_48820256_48822184_48822264_48822619_48822795_48822911_48823589_48823671_48823786_48823921_48824069_48824165_48824295_48824543
transcript_203371.known	chrX	-	1025	3	FSM	ENSG00000102109.9	ENST00000218230.6	1025	3	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	27.5	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGCTTGTCTGTGTG	NA	False	NA	-8	True	AATAAA	-15	NA	48835610	48831095	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_48831456_48831868_48832342_48835418
transcript_203376.nic	chrX	+	831	7	NIC	ENSG00000102103.18	novel	938	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_5	129.778550701656	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGAGTGCTTCCTTTGA	48889766	True	NA	25	True	AATAAA	-26	NA	48897925	48903143	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_48898015_48898491_48898577_48901189_48901302_48901929_48902043_48902232_48902385_48902731_48902796_48902927
transcript_203377.known	chrX	+	938	7	FSM	ENSG00000102103.18	ENST00000376563.6	938	7	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_1	54.8171201967658	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGAGTGCTTCCTTTGA	48889792	True	NA	25	True	AATAAA	-26	NA	48897951	48903143	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48898015_48898491_48898577_48901189_48901302_48901929_48902043_48902232_48902518_48902731_48902796_48902927
transcript_203380.known	chrX	+	784	7	FSM	ENSG00000102103.18	ENST00000470062.5	784	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	142.442581024386	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCCCTGGGTTAAAATAAA	48889836	True	NA	-20	True	NA	NA	NA	48897995	48903098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48898083_48898491_48898577_48901189_48901302_48901929_48902043_48902232_48902385_48902731_48902796_48902927
transcript_203381.known	chrX	+	917	7	FSM	ENSG00000102103.18	ENST00000443648.6	917	7	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	91.9111890178049	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGAGTGCTTCCTTTGA	48889881	False	NA	25	True	AATAAA	-26	NA	48898040	48903143	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48898083_48898491_48898577_48901189_48901302_48901929_48902043_48902232_48902518_48902731_48902796_48902927
transcript_203382.known	chrX	-	939	7	FSM	ENSG00000126768.12	ENST00000495490.6	939	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	446.540653866538	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTATGTGTGGACTCCTT	NA	False	NA	-6	True	TTTAAA	-14	NA	48897790	48893452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_48893818_48893899_48894011_48894096_48894226_48895037_48895102_48895351_48895455_48896758_48896859_48897723
transcript_203383.known	chrX	-	964	7	FSM	ENSG00000126768.12	ENST00000465150.6	964	7	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_5	427.19342483496	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGACTCCTTGAACTG	NA	False	NA	0	True	TTTAAA	-20	NA	48897762	48893446	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_48893818_48893899_48894011_48894096_48894226_48895037_48895102_48895351_48895502_48896758_48896859_48897723
transcript_203386.known	chrX	+	664	6	FSM	ENSG00000102103.18	ENST00000247140.8	664	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	137.350063705846	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGAGTGCTTCCTTTG	48889780	True	NA	24	True	AATAAA	-25	NA	48897939	48903142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48898015_48898491_48898577_48901189_48901302_48901929_48902043_48902731_48902796_48902927
transcript_203388.known	chrX	+	760	6	FSM	ENSG00000102103.18	ENST00000376566.8	760	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	151.58548743201	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGAGTGCTTCCTTTG	48889752	True	NA	24	True	AATAAA	-25	NA	48897911	48903142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48898083_48898491_48898577_48901189_48901302_48901929_48902043_48902731_48902796_48902927
transcript_203389.known	chrX	-	950	7	FSM	ENSG00000126768.12	ENST00000376582.7	950	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	372.717348968655	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGACTCCTTGAACTG	NA	False	NA	0	True	TTTAAA	-20	NA	48898143	48893446	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_48893818_48893899_48894011_48894096_48894226_48895037_48895102_48896758_48896859_48897723_48897822_48898066
transcript_20339.known	chr1	-	864	6	FSM	ENSG00000162910.19	ENST00000430433.5	864	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	278.022732883482	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTGTCTGTCTCCCCA	-228105245	True	NA	0	True	NA	NA	NA	228109312	228106679	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_228106919_228107667_228107870_228107976_228108085_228108234_228108319_228108954_228109022_228109148
transcript_203393.nnic	chrX	-	737	5	NIC	ENSG00000126768.12	novel	950	7	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	42	junction_4	430.419853166649	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGGACTCCTTGAAC	NA	False	NA	-2	True	TTTAAA	-18	NA	48897787	48893448	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_48893818_48893899_48894011_48894096_48894226_48895037_48895102_48897723
transcript_203398.known	chrX	+	965	7	FSM	ENSG00000102103.18	ENST00000396763.6	962	7	-4	1	-4	0	multi-exon	FALSE	canonical	2	4	junction_1	139.845152460379	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGAGTGCTTCCTTTG	48898147	True	NA	24	True	AATAAA	-25	NA	48898255	48903142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_48898347_48898491_48898577_48901189_48901302_48901929_48902043_48902232_48902518_48902731_48902796_48902927
transcript_203399.known	chrX	-	865	5	FSM	ENSG00000102100.16	ENST00000376529.8	865	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	79.913625246262	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGACTTGGGTTGGGCAGCC	NA	False	NA	-9	True	AATAAA	-18	NA	48911646	48903183	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_48903466_48904745_48904893_48906391_48906544_48909813_48909997_48911545
transcript_203400.known	chrX	-	1456	5	FSM	ENSG00000102100.16	ENST00000247138.11	1456	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	68.3643730315725	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACTTGGGTTGGGCAGCCT	NA	False	NA	-8	True	AATAAA	-19	NA	48911646	48903182	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_48903466_48904745_48905483_48906391_48906544_48909813_48909997_48911545
transcript_203401.known	chrX	-	1563	5	FSM	ENSG00000102100.16	ENST00000452555.7	1563	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	82.5242388635	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTTTTTTGTCTGCTCCC	NA	False	NA	NA	False	NA	NA	NA	48911646	48904439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_48905483_48906391_48906544_48909813_48909997_48910233_48910318_48911545
transcript_203402.known	chrX	-	1739	4	FSM	ENSG00000102100.16	ENST00000445167.7	1739	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	72.9566081082904	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCACGTGTAGCTTTCTGA	NA	False	NA	-1	True	AATAAA	-18	NA	48911669	48903612	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_48904893_48906391_48906544_48909813_48909997_48911545
transcript_203403.known	chrX	-	486	4	FSM	ENSG00000102100.16	ENST00000634665.1	486	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	64.6580750306307	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTCCTCTTCACT	NA	False	NA	NA	False	NA	NA	NA	48911646	48905397	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_48905483_48906391_48906509_48909813_48909997_48911545
transcript_203404.known	chrX	-	3047	4	FSM	ENSG00000102100.16	ENST00000376521.6	3047	4	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	29.6348143611905	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGACTTGGGTTGGGCAGCC	NA	False	NA	-9	True	AATAAA	-18	NA	48911958	48903183	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_48905483_48906391_48906544_48909813_48909997_48911545
transcript_203405.known	chrX	-	903	3	FSM	ENSG00000102100.16	ENST00000376512.2	903	3	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_2	22	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGGTGTTGTGAGAATT	NA	False	NA	NA	False	TTTAAA	-27	NA	48911677	48905955	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_48906544_48909813_48909997_48911545
transcript_203409.known	chrX	-	2075	6	FSM	ENSG00000102096.9	ENST00000376509.4	2075	6	0	0	0	0	multi-exon	TRUE	canonical	3	1261	junction_3	92.5289143997702	2022	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCTGGCCATTTGTAGGT	NA	False	NA	-15	True	AATAAA	-17	NA	48919024	48913181	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_48914295_48914394_48914572_48915019_48915393_48917780_48917832_48918535_48918646_48918773
transcript_203428.known	chrX	-	2077	10	FSM	ENSG00000068308.15	ENST00000455452.5	2077	10	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_6	115.079789818592	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGACTCTGTTCTGTGTGGG	NA	False	NA	-1	True	AATAAA	-22	NA	48957189	48922205	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_48922911_48923136_48923296_48923632_48923747_48923850_48924053_48925846_48926051_48934463_48934613_48934695_48934868_48934953_48935019_48944189_48944284_48956976
transcript_203429.nic	chrX	-	2869	10	NIC	ENSG00000068308.15	novel	2888	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	34	junction_8	114.979654668356	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGCGACTCTGTTCTGT	NA	False	NA	-6	True	AATAAA	-17	NA	48957607	48922210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_48923296_48923632_48923747_48923850_48924053_48925846_48926051_48934463_48934613_48934710_48934868_48934953_48935019_48936190_48936359_48944189_48944284_48956976
transcript_20343.known	chr1	-	1423	6	FSM	ENSG00000162910.19	ENST00000366731.9	1423	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	284.646166318818	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-228105232	True	NA	1	True	NA	NA	NA	228109299	228106678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_228106919_228107667_228107870_228107976_228108138_228108234_228108319_228108436_228109022_228109148
transcript_203436.nic	chrX	-	2450	10	NIC	ENSG00000068308.15	novel	2682	10	NA	NA	-10	303	intron_retention	FALSE	canonical	3	34	junction_8	114.979654668356	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAAATCAACTAATCAAAA	NA	False	NA	29	True	ATTAAA	-15	NA	48957617	48922639	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_48923296_48923632_48923747_48923850_48924053_48925846_48926051_48934463_48934613_48934710_48934868_48934953_48935019_48936190_48936359_48944189_48944284_48956976
transcript_203438.known	chrX	-	2740	9	FSM	ENSG00000068308.15	ENST00000156084.8	2740	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	100.57211343111	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGCGACTCTGTTCTGT	NA	False	NA	-6	True	AATAAA	-17	NA	48957631	48922210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_48923296_48923632_48923747_48923850_48924053_48925846_48926051_48934463_48934613_48934695_48934868_48934953_48935019_48944189_48944284_48956976
transcript_203456.nnic	chrX	-	3108	27	NNC	ENSG00000068400.13	novel	3031	26	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_14	81.2215266449267	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGTCTCGTCTCGTTCT	NA	False	NA	-5	True	NA	NA	NA	49002266	48973722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_48974286_48975154_48975310_48976017_48976112_48976240_48976364_48978304_48978436_48981214_48981315_48981415_48981473_48981595_48981692_48981794_48981873_48982978_48983093_48983227_48983441_48983774_48983871_48985267_48985403_48986164_48986240_48987784_48987878_48988120_48988199_48989610_48989711_48989834_48989883_48989971_48990004_48990684_48990733_48990925_48991111_48993427_48993579_48997249_48997358_48998153_48998181_48999237_48999300_48999437_48999505_49002187
transcript_203461.known	chrX	-	3031	26	FSM	ENSG00000068400.13	ENST00000376423.8	3031	26	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_16	31.7730955369476	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGTCTCGTCTCGTTCT	NA	False	NA	-5	True	NA	NA	NA	49002264	48973722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_48974286_48975154_48975310_48976017_48976112_48976240_48976364_48978304_48978436_48981214_48981315_48981415_48981473_48981595_48981692_48981794_48981873_48982978_48983093_48983227_48983441_48983774_48983871_48985267_48985403_48987784_48987878_48988120_48988199_48989610_48989711_48989834_48989883_48989971_48990004_48990684_48990733_48990925_48991111_48993427_48993579_48997249_48997358_48998153_48998181_48999237_48999300_48999437_48999505_49002187
transcript_203466.known	chrX	-	2908	25	FSM	ENSG00000068400.13	ENST00000593475.5	2908	25	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_13	67.666038071793	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGTCTCGTCTCGTTCT	NA	False	NA	-5	True	NA	NA	NA	49002234	48973722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_48974286_48975154_48975310_48976017_48976112_48976240_48976364_48978304_48978436_48981214_48981315_48981415_48981473_48981595_48981692_48981794_48981873_48982978_48983093_48983227_48983441_48983774_48983871_48985267_48985403_48988120_48988199_48989610_48989711_48989834_48989883_48989971_48990004_48990684_48990733_48990925_48991111_48993427_48993579_48997249_48997358_48998153_48998181_48999237_48999300_48999437_48999505_49002187
transcript_203471.nic	chrX	-	3741	25	NIC	ENSG00000068400.13	novel	3031	26	NA	NA	-2	0	intron_retention	FALSE	canonical	3	238	junction_15	31.0760715377961	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGTCTCGTCTCGTTCT	NA	False	NA	-5	True	NA	NA	NA	49002266	48973722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_48974286_48975154_48976112_48976240_48976364_48978304_48978436_48981214_48981315_48981415_48981473_48981595_48981692_48981794_48981873_48982978_48983093_48983227_48983441_48983774_48983871_48985267_48985403_48987784_48987878_48988120_48988199_48989610_48989711_48989834_48989883_48989971_48990004_48990684_48990733_48990925_48991111_48993427_48993579_48997249_48997358_48998153_48998181_48999237_48999300_48999437_48999505_49002187
transcript_203472.known	chrX	-	2881	24	FSM	ENSG00000068400.13	ENST00000622599.4	2881	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	68.6914693278001	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGTCTCGTCTCGTTCT	NA	False	NA	-5	True	NA	NA	NA	49002249	48973722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_48974286_48975154_48975310_48976017_48976112_48976240_48976364_48978304_48978436_48981214_48981315_48981415_48981473_48981595_48981692_48981794_48981873_48982978_48983093_48983227_48983441_48983774_48983871_48985267_48985403_48987784_48987878_48988120_48988199_48989610_48989711_48989834_48989883_48989971_48990004_48990684_48990733_48990925_48991111_48993427_48993579_48999237_48999300_48999437_48999505_49002187
transcript_203476.nic	chrX	-	3870	24	NIC	ENSG00000068400.13	novel	3031	26	NA	NA	-2	0	intron_retention	FALSE	canonical	3	238	junction_14	31.2449920372883	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGTCTCGTCTCGTTCT	NA	False	NA	-5	True	NA	NA	NA	49002266	48973722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_48974286_48975154_48976364_48978304_48978436_48981214_48981315_48981415_48981473_48981595_48981692_48981794_48981873_48982978_48983093_48983227_48983441_48983774_48983871_48985267_48985403_48987784_48987878_48988120_48988199_48989610_48989711_48989834_48989883_48989971_48990004_48990684_48990733_48990925_48991111_48993427_48993579_48997249_48997358_48998153_48998181_48999237_48999300_48999437_48999505_49002187
transcript_20348.nic	chr1	-	829	6	NIC	ENSG00000162910.19	novel	665	6	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_4	270.480609286507	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGAGTCTGTGTCTGT	NA	False	NA	-7	True	NA	NA	NA	228109354	228106686	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_228106919_228107667_228107870_228108234_228108319_228108436_228108475_228108954_228109022_228109148
transcript_203482.nic	chrX	-	2711	22	ISM	ENSG00000068400.13	ENST00000376423.8	3031	26	-2	3969	-2	142	5prime_fragment	FALSE	canonical	3	238	junction_12	28.1345971280123	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCTTAAATGTCAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-22	NA	49002266	48977691	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_48978436_48981214_48981315_48981415_48981473_48981595_48981692_48981794_48981873_48982978_48983093_48983227_48983441_48983774_48983871_48985267_48985403_48987784_48987878_48988120_48988199_48989610_48989711_48989834_48989883_48989971_48990004_48990684_48990733_48990925_48991111_48993427_48993579_48997249_48997358_48998153_48998181_48999237_48999300_48999437_48999505_49002187
transcript_20349.known	chr1	-	665	6	FSM	ENSG00000162910.19	ENST00000391867.8	665	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	308.30180018936	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGAGTCTGTGTCTGT	-228105232	True	NA	-7	True	NA	NA	NA	228109299	228106686	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_228106919_228107667_228107870_228108234_228108322_228108436_228108475_228108954_228109022_228109260
transcript_203508.known	chrX	-	3279	10	FSM	ENSG00000068323.17	ENST00000493583.5	3279	10	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_8	44.9265518566515	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTCCTGTCCTTGTTTT	NA	False	NA	-3	True	AATAAA	-38	NA	49043410	49028725	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_49030602_49031396_49031545_49033464_49033541_49033725_49033783_49034133_49034252_49038009_49038115_49038196_49038443_49039106_49039346_49040454_49040569_49043110
transcript_203510.known	chrX	-	3291	10	FSM	ENSG00000068323.17	ENST00000315869.8	3291	10	0	0	0	0	multi-exon	TRUE	canonical	3	143	junction_8	26.3016687261052	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTCCTGTCCTTGTTTT	NA	False	NA	-3	True	AATAAA	-38	NA	49043357	49028725	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_49030602_49031396_49031545_49033464_49033541_49033725_49033783_49034133_49034252_49038009_49038115_49038196_49038443_49039106_49039411_49040454_49040569_49043110
transcript_203523.known	chrX	+	2752	10	FSM	ENSG00000147144.13	ENST00000597275.5	2752	10	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	10.3899286467209	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTGTGTCTTGTCTGT	49052744	True	NA	NA	False	NA	NA	NA	49053571	49068464	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_49053878_49061958_49062118_49062234_49062326_49062467_49062602_49063860_49064002_49064369_49064665_49065035_49065099_49065453_49065629_49065746_49065846_49067175
transcript_203524.known	chrX	+	3857	10	FSM	ENSG00000147144.13	ENST00000606812.5	3857	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	13.3036707085296	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTTGCTGCTCTGTCTG	49058689	True	NA	8	True	AATAAA	-17	NA	49058982	49069857	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_49059060_49061958_49062059_49062234_49062326_49062467_49062602_49063860_49064002_49064369_49064665_49065035_49065099_49065453_49065629_49065746_49065846_49067175
transcript_203525.known	chrX	+	2415	10	FSM	ENSG00000147144.13	ENST00000496529.6	2415	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	12.4998765426002	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGCCGGGAGGAAGGGAC	49058672	True	NA	NA	False	NA	NA	NA	49058965	49068339	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_49059060_49061958_49062118_49062234_49062326_49062467_49062602_49063860_49064002_49064369_49064665_49065035_49065099_49065453_49065629_49065746_49065846_49067175
transcript_203528.nic	chrX	+	3955	10	NIC	ENSG00000147144.13	novel	3857	10	NA	NA	-3	0	intron_retention	FALSE	canonical	2	6	junction_1	12.0922380981447	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTTGCTGCTCTGTCTG	49058686	True	NA	8	True	AATAAA	-17	NA	49058979	49069857	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_49059096_49061958_49062118_49062234_49062326_49062467_49062602_49063860_49064002_49064369_49064665_49065035_49065099_49065453_49065629_49065746_49065846_49067175
transcript_203537.known	chrX	-	1381	11	FSM	ENSG00000196998.19	ENST00000376368.7	1381	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	42.5517332196939	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGCTGGTGCCCACTTTC	NA	False	NA	-66	True	NA	NA	NA	49079929	49074703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_49074913_49075135_49075282_49075363_49075466_49075544_49075754_49075865_49075946_49076429_49076525_49076644_49076754_49077642_49077748_49077836_49077912_49078040_49078113_49079750
transcript_203539.known	chrX	-	1444	11	FSM	ENSG00000196998.19	ENST00000322995.13	1444	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	44.3225676151552	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTCTTGATGACTGTGT	NA	False	NA	-2	True	AATAAA	-18	NA	49079898	49074639	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_49074913_49075135_49075282_49075363_49075466_49075544_49075754_49075865_49075979_49076429_49076525_49076644_49076751_49077642_49077748_49077836_49077912_49078040_49078113_49079750
transcript_203540.nic	chrX	-	1310	11	NIC	ENSG00000196998.19	novel	1598	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_4	40.6182225115772	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTCTTGATGACTGTGT	NA	False	NA	-2	True	AATAAA	-18	NA	49079887	49074639	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_49074913_49075135_49075282_49075363_49075466_49075544_49075664_49075865_49075946_49076429_49076525_49076644_49076751_49077642_49077748_49077836_49077912_49078040_49078113_49079750
transcript_203546.known	chrX	-	1146	10	FSM	ENSG00000196998.19	ENST00000396681.9	1146	10	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	47.5895517114709	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGCTAGGGACCTGCAG	NA	False	NA	NA	False	NA	NA	NA	49079902	49074791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_49074913_49075135_49075282_49075363_49075454_49075544_49075754_49075865_49075946_49076429_49076525_49076644_49076751_49077836_49077912_49078040_49078113_49079750
transcript_203557.nic	chrX	-	2436	9	NIC	ENSG00000196998.19	novel	1381	11	NA	NA	-13	0	intron_retention	FALSE	canonical	3	124	junction_5	7.95200446428446	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTCTTGATGACTGTGT	NA	False	NA	-2	True	AATAAA	-18	NA	49079942	49074639	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_49074913_49075135_49075282_49075363_49075466_49075544_49075754_49075865_49075946_49076429_49076525_49076644_49077912_49078040_49078113_49079750
transcript_203558.known	chrX	-	2610	9	FSM	ENSG00000196998.19	ENST00000465806.6	2610	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	43.7733866064759	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTCAGGGGCGGGGCAT	NA	False	NA	-7	True	AATAAA	-25	NA	49080097	49074432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_49074913_49075135_49075282_49075363_49075466_49075544_49075754_49075865_49075946_49076429_49076525_49076644_49077912_49078040_49078113_49079938
transcript_203568.known	chrX	-	1260	3	FSM	ENSG00000243279.4	ENST00000553851.3	1260	3	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	13	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGCCTCCTGGGTAAAG	NA	False	NA	-4	True	AATAAA	-24	NA	49074002	49071160	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_49072009_49072432_49072651_49073808
transcript_203569.known	chrX	-	1658	11	FSM	ENSG00000068394.11	ENST00000156109.7	1658	11	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_8	6.64906008395172	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTAATAGAAAGATGAAATC	NA	False	NA	-22	True	AATAAA	-15	NA	49123735	49113406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_49113756_49113852_49113939_49115725_49115796_49115890_49116015_49116220_49116324_49117029_49117163_49117596_49117811_49119704_49119815_49122397_49122523_49122621_49122777_49123546
transcript_203577.known	chrX	-	2795	9	FSM	ENSG00000012211.13	ENST00000599218.6	2795	9	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	6.59545297913646	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGGGTGGGAGTTGGTCT	NA	False	NA	-11	True	AATAAA	-18	NA	49186373	49174801	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_49176266_49176902_49177203_49177992_49178180_49178271_49178476_49179250_49179389_49179692_49179807_49183733_49183918_49184624_49184711_49186255
transcript_20358.known	chr1	-	722	5	FSM	ENSG00000162910.19	ENST00000336300.9	722	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	317.917442113515	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-228105239	True	NA	1	True	NA	NA	NA	228109306	228106678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228108436_228108475_228109148
transcript_20359.known	chr1	-	603	5	FSM	ENSG00000162910.19	ENST00000366747.7	603	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	321.706679290313	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-228105232	True	NA	1	True	NA	NA	NA	228109299	228106678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228108436_228108475_228109260
transcript_203593.known	chrX	+	1103	5	FSM	ENSG00000102007.11	ENST00000376327.6	1103	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	9.63068014212911	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGAGGCCCGGTGCGGTGG	49170484	True	NA	NA	False	ATTAAA	-19	NA	49171897	49175235	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_49172097_49173128_49173282_49173387_49173484_49174334_49174426_49174671
transcript_203594.known	chrX	-	547	3	FSM	ENSG00000012211.13	ENST00000611313.1	547	3	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGATGGAAGAGTGGTC	NA	False	NA	NA	False	GGGGCT	-42	NA	49186392	49183593	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_49183918_49184624_49184711_49186255
transcript_203595.known	chrX	-	2421	7	FSM	ENSG00000102003.12	ENST00000263233.9	2421	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	4.7169905660283	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTACCCGGCTCTGATTTC	NA	False	NA	-11	True	AATAAA	-16	NA	49200193	49187814	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_49189283_49191432_49191764_49193271_49193464_49194165_49194362_49197714_49197840_49198967_49199034_49200150
transcript_203596.known	chrX	-	1850	6	FSM	ENSG00000102003.12	ENST00000479808.5	1850	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	4.06939798987516	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTCTCAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	49200199	49190541	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_49191764_49193271_49193464_49194165_49194362_49197714_49197840_49198967_49199034_49200150
transcript_20360.known	chr1	-	726	5	FSM	ENSG00000162910.19	ENST00000366744.5	726	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	349.664839524937	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-228105213	True	NA	1	True	NA	NA	NA	228109280	228106678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228108440_228108509_228109148
transcript_203602.nnic	chrX	+	1545	5	NIC	ENSG00000049769.14	novel	2903	6	NA	NA	-57	-3	intron_retention	FALSE	canonical	3	30	junction_4	10.8282039138539	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAAGTAGTCTTGCGCAT	49269721	False	NA	6	True	AATAAA	-15	NA	49269735	49301458	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_49270874_49281405_49281462_49281980_49282064_49299275_49299436_49301350
transcript_203603.known	chrX	+	3477	4	FSM	ENSG00000049769.14	ENST00000055335.11	3477	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	11.5181016954473	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAACACCACATATTTATT	49269283	True	NA	NA	False	AATAAA	-17	NA	49269792	49288090	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_49270874_49281405_49281462_49281980_49282064_49285833
transcript_203605.known	chrX	+	2310	17	FSM	ENSG00000101997.13	ENST00000376227.4	2310	17	0	0	0	0	multi-exon	TRUE	canonical	3	33	junction_5	9.11643433585741	357	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTAAGCTGAGGCATGGAT	49234753	True	NA	17	True	AATAAA	-18	NA	49235469	49250520	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_49235687_49237085_49237264_49242015_49242149_49242885_49242993_49243117_49243185_49243283_49243463_49246730_49246926_49247495_49247559_49247648_49247769_49248190_49248311_49248406_49248524_49248632_49248735_49248816_49248925_49249166_49249263_49249508_49249569_49249650_49249726_49250147
transcript_203606.known	chrX	+	487	5	FSM	ENSG00000101951.17	ENST00000376141.5	487	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	4.26468052730799	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTGTCTTTTGTAAAATT	49829154	True	NA	11	True	AATAAA	-26	NA	49829259	49833973	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_49829297_49830398_49830507_49830996_49831085_49832524_49832651_49833845
transcript_203607.known	chrX	+	3075	1	FSM	ENSG00000273820.2	ENST00000621775.2	3075	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAAACTTCTTTGGACCA	49879425	False	NA	35	True	AGTAAA	-18	NA	49879483	49882558	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_49879500_49882600
transcript_203609.known	chrX	+	9863	15	FSM	ENSG00000171365.17	ENST00000376091.8	9863	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	6.42380775883346	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGTGTCTGGTGTGTTT	49921801	True	NA	6	True	AATAAA	-16	NA	49922595	50099230	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_49922793_49923406_49923483_49925170_49925315_50042315_50042463_50069878_50070031_50072488_50072589_50075794_50075983_50080593_50080717_50081640_50081848_50085979_50086061_50086327_50086871_50088697_50088885_50090115_50090515_50090669_50090887_50092128
transcript_203612.known	chrX	+	10108	15	FSM	ENSG00000171365.17	ENST00000376088.7	10108	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	6.72946612189364	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTGGTGTGTTTCTAAA	49921820	True	NA	11	True	AATAAA	-21	NA	49922614	50099235	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_49922793_49923406_49923742_49925170_49925315_50042315_50042463_50069878_50070031_50072488_50072589_50075794_50075983_50080593_50080717_50081640_50081848_50085979_50086061_50086327_50086871_50088697_50088885_50090115_50090515_50090669_50090887_50092128
transcript_203618.known	chrX	+	1925	2	FSM	ENSG00000122824.11	ENST00000356450.3	1925	2	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	0	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGGAGTTATTCTTATT	51330426	True	NA	NA	False	AATAAA	-15	NA	51332821	51337525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_51333460_51336238
transcript_203619.known	chrX	-	2381	2	FSM	ENSG00000196368.5	ENST00000375992.4	2381	2	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_1	0	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCAGAGTTTACTTGTA	NA	False	NA	-13	True	AATAAA	-15	NA	51496592	51490010	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_51491750_51495950
transcript_203622.known	chrX	-	1893	1	FSM	ENSG00000224109.4	ENST00000417339.4	1893	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCTGGATACTCTTTCCA	NA	False	NA	4	True	AATAAA	-31	NA	51618912	51617019	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_51617000_51618900
transcript_203623.known	chrX	-	1620	1	FSM	ENSG00000283093.1	ENST00000634648.1	1620	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGTGTGTTGGTGTGTCT	NA	False	NA	NA	False	AGTAAA	-15	NA	51682831	51681211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_51681200_51682800
transcript_203624.known	chrX	+	1620	1	FSM	ENSG00000223591.5	ENST00000602548.2	1620	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGTGTGTTGGTGTGTCT	NA	False	NA	NA	False	AGTAAA	-15	NA	51710511	51712131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_51710500_51712100
transcript_203626.known	chrX	+	2791	1	FSM	ENSG00000189369.9	ENST00000340438.6	2791	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGGCTCAGGCCGTCTT	51742223	True	NA	20	True	AATAAA	-36	NA	51743441	51746232	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_51743400_51746200
transcript_20363.nic	chr1	-	1309	5	NIC	ENSG00000162910.19	novel	1423	6	NA	NA	-42	0	intron_retention	FALSE	canonical	3	135	junction_3	248.295187226817	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGAGTCTGTGTCTGT	NA	False	NA	-7	True	NA	NA	NA	228109354	228106686	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_228106919_228107667_228107870_228108234_228108319_228108436_228109022_228109148
transcript_203631.known	chrX	+	2875	14	FSM	ENSG00000179222.18	ENST00000375695.2	2875	14	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	345.82228565325	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGATGTGCTCTCTGCTTC	51885008	True	NA	13	True	AATAAA	-21	NA	51893638	51902354	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_51893756_51894268_51894350_51894626_51894795_51895052_51895761_51896408_51897078_51897207_51897272_51897546_51897627_51897794_51897887_51898113_51898194_51898284_51898328_51898580_51898644_51900181_51900297_51901552_51901939_51902145
transcript_203634.known	chrX	+	2701	13	FSM	ENSG00000179222.18	ENST00000375772.7	2701	13	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	237.329397790403	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGATGTGCTCTCTGCTTC	51801229	True	NA	13	True	AATAAA	-21	NA	51803006	51902354	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_51803118_51894268_51894350_51895052_51895761_51896408_51897078_51897207_51897272_51897546_51897627_51897794_51897887_51898113_51898194_51898284_51898328_51898580_51898644_51900181_51900297_51901552_51901939_51902145
transcript_203639.known	chrX	+	2723	13	FSM	ENSG00000179222.18	ENST00000326587.12	2723	13	0	0	0	0	multi-exon	FALSE	canonical	3	672	junction_1	121.828060761423	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGATGTGCTCTCTGCTTC	51884992	True	NA	13	True	AATAAA	-21	NA	51893622	51902354	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_51893756_51894268_51894350_51895052_51895761_51896408_51897078_51897207_51897272_51897546_51897627_51897794_51897887_51898113_51898194_51898284_51898328_51898580_51898644_51900181_51900297_51901552_51901939_51902145
transcript_20365.known	chr1	-	738	5	FSM	ENSG00000162910.19	ENST00000336520.8	738	5	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_3	211.354412066557	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGTCTGTGTCTGTCT	-228105232	True	NA	-5	True	NA	NA	NA	228109299	228106684	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228108954_228109022_228109148
transcript_203650.known	chrX	+	2906	12	FSM	ENSG00000179222.18	ENST00000485420.5	2906	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	289.003245713708	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGATGTGCTCTCTGCT	51885027	True	NA	11	True	AATAAA	-19	NA	51893657	51902352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_51893756_51894275_51894350_51895052_51895761_51896408_51897078_51897207_51897272_51897546_51897627_51897794_51898194_51898284_51898328_51898580_51898644_51900181_51900297_51901552_51901939_51902145
transcript_20366.known	chr1	-	632	5	FSM	ENSG00000162910.19	ENST00000295008.8	632	5	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_4	257.405322400295	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-228105232	True	NA	1	True	NA	NA	NA	228109299	228106678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228108954_228109022_228109260
transcript_203670.nic	chrX	-	2462	14	NIC	ENSG00000187243.17	novel	2513	13	NA	NA	-27	0	intron_retention	FALSE	canonical	3	16	junction_2	329.812157404177	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	52069246	52061826	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_52062039_52062233_52062252_52062365_52062665_52062986_52063102_52064046_52064110_52064500_52064544_52064628_52064709_52065329_52065422_52065809_52065890_52066082_52066147_52066249_52066454_52066864_52067699_52067962_52068204_52069129
transcript_203683.known	chrX	-	2618	14	FSM	ENSG00000187243.17	ENST00000485287.5	2618	14	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_3	457.203979958553	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	52069219	52061826	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_52062039_52062233_52062665_52062986_52063102_52063702_52063751_52064046_52064110_52064500_52064544_52064628_52064709_52065329_52065422_52065809_52065890_52066082_52066147_52066249_52066454_52066864_52067699_52067962_52068225_52069129
transcript_20369.known	chr1	-	661	4	FSM	ENSG00000162910.19	ENST00000348259.9	661	4	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_3	286.329646852481	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-228105216	True	NA	1	True	NA	NA	NA	228109283	228106678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228109148
transcript_20370.known	chr1	-	565	4	FSM	ENSG00000162910.19	ENST00000366746.7	565	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	314.774345982783	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-228105232	True	NA	1	True	NA	NA	NA	228109299	228106678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228109260
transcript_203706.nnic	chrX	-	3102	13	NNC	ENSG00000187243.17	novel	2513	13	NA	NA	4	0	intron_retention	FALSE	canonical	3	77	junction_3	403.014086809216	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	52069215	52061826	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_52062039_52062233_52062665_52062986_52063102_52063522_52063669_52064046_52064110_52064500_52064544_52064628_52064709_52065329_52065422_52065809_52065890_52066082_52066147_52066249_52067699_52067962_52068204_52069129
transcript_203714.known	chrX	-	2482	13	FSM	ENSG00000187243.17	ENST00000497164.5	2482	13	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_12	258.090531058817	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	52069182	52061826	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_52062039_52062233_52062665_52062986_52063102_52064046_52064110_52064500_52064544_52064628_52064709_52065329_52065422_52065809_52065890_52066082_52066147_52066249_52066454_52066864_52067699_52067962_52068174_52069129
transcript_203715.known	chrX	-	2578	13	FSM	ENSG00000187243.17	ENST00000335504.10	2513	13	-65	0	-29	0	multi-exon	FALSE	canonical	3	671	junction_12	171.506478659619	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	52069248	52061826	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_52062039_52062233_52062665_52062986_52063102_52064046_52064110_52064500_52064544_52064628_52064709_52065329_52065422_52065809_52065890_52066082_52066147_52066249_52066454_52066864_52067699_52067962_52068204_52069129
transcript_203716.nic	chrX	-	2602	13	NIC	ENSG00000187243.17	novel	2618	14	NA	NA	-32	0	intron_retention	FALSE	canonical	3	168	junction_12	289.33375335991	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	52069251	52061826	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_52062039_52062233_52062665_52062986_52063102_52064046_52064110_52064500_52064544_52064628_52064709_52065329_52065422_52065809_52065890_52066082_52066147_52066249_52066454_52066864_52067699_52067962_52068225_52069129
transcript_203739.nic	chrX	-	2996	12	NIC	ENSG00000187243.17	novel	2482	13	NA	NA	-66	0	intron_retention	FALSE	canonical	3	293	junction_11	256.152104864368	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	52069285	52061826	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_52062039_52062233_52062665_52062986_52063102_52064046_52064110_52064500_52064544_52064628_52064709_52065329_52065422_52065809_52065890_52066082_52066147_52066249_52067699_52067962_52068174_52069129
transcript_203740.nic	chrX	-	3150	12	NIC	ENSG00000187243.17	novel	2513	13	NA	NA	-190	0	intron_retention	FALSE	canonical	3	671	junction_11	152.550492927955	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	52069409	52061826	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_52062039_52062233_52062665_52062986_52063102_52064046_52064110_52064500_52064544_52064628_52064709_52065329_52065422_52065809_52065890_52066082_52066147_52066249_52067699_52067962_52068204_52069129
transcript_203741.nic	chrX	-	3013	12	NIC	ENSG00000187243.17	novel	2618	14	NA	NA	-32	0	intron_retention	FALSE	canonical	3	168	junction_11	291.225424600745	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	52069251	52061826	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_52062039_52062233_52062665_52062986_52063102_52064046_52064110_52064500_52064544_52064628_52064709_52065329_52065422_52065809_52065890_52066082_52066147_52066249_52067699_52067962_52068225_52069129
transcript_203742.known	chrX	-	2995	12	FSM	ENSG00000187243.17	ENST00000470594.5	2995	12	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_11	410.572851167369	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	52069182	52061826	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_52062039_52062221_52062665_52062986_52063102_52064046_52064110_52064500_52064544_52064628_52064709_52065329_52065422_52065809_52065890_52066082_52066147_52066249_52067699_52067962_52068264_52069129
transcript_20377.known	chr1	-	630	4	FSM	ENSG00000162910.19	ENST00000366742.5	630	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_3	307.419727553208	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-228109045	False	NA	1	True	NA	NA	NA	228109055	228106678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_228106919_228107667_228107870_228108234_228108322_228108954
transcript_20378.known	chr1	-	660	5	FSM	ENSG00000162910.19	ENST00000366736.5	660	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	321.706679290313	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-228109006	False	NA	1	True	NA	NA	NA	228109016	228106678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228108436_228108509_228108954
transcript_20379.known	chr1	-	1212	3	FSM	ENSG00000162910.19	ENST00000366735.5	1212	3	0	0	0	0	multi-exon	FALSE	canonical	3	611	junction_2	84.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-228108994	False	NA	1	True	NA	NA	NA	228109004	228106678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_228106919_228107667_228107870_228108234
transcript_203794.known	chrX	+	2618	14	FSM	ENSG00000154545.17	ENST00000599522.7	2618	14	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_11	461.048213987758	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	52184875	52192268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_52184966_52185870_52186133_52186396_52187231_52187641_52187846_52187948_52188013_52188205_52188286_52188673_52188766_52189386_52189467_52189551_52189595_52189985_52190049_52190344_52190393_52190993_52191109_52191430_52191862_52192056
transcript_203812.known	chrX	+	2537	13	FSM	ENSG00000154545.17	ENST00000471932.6	2537	13	0	0	0	0	multi-exon	FALSE	canonical	3	659	junction_1	177.320390348469	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	52184887	52192268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_52184966_52185891_52186133_52186396_52187231_52187641_52187846_52187948_52188013_52188205_52188286_52188673_52188766_52189386_52189467_52189551_52189595_52189985_52190049_52190993_52191109_52191430_52191862_52192056
transcript_203817.nic	chrX	+	2662	13	NIC	ENSG00000154545.17	novel	2537	13	NA	NA	-53	0	intron_retention	TRUE	canonical	3	29	junction_1	327.734680547136	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	52184822	52192268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_52184966_52185831_52186133_52186396_52187231_52187641_52187846_52187948_52188013_52188205_52188286_52188673_52188766_52189386_52189467_52189551_52189595_52189985_52190049_52190993_52191109_52191430_52191862_52192056
transcript_203821.nic	chrX	+	2606	13	NIC	ENSG00000154545.17	novel	2618	14	NA	NA	-36	0	intron_retention	FALSE	canonical	3	166	junction_1	292.798091220251	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	52184839	52192268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_52184966_52185870_52186133_52186396_52187231_52187641_52187846_52187948_52188013_52188205_52188286_52188673_52188766_52189386_52189467_52189551_52189595_52189985_52190049_52190993_52191109_52191430_52191862_52192056
transcript_203830.known	chrX	+	2483	13	FSM	ENSG00000154545.17	ENST00000498483.5	2483	13	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_1	263.602749838127	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	52184911	52192268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_52184966_52185921_52186133_52186396_52187231_52187641_52187846_52187948_52188013_52188205_52188286_52188673_52188766_52189386_52189467_52189551_52189595_52189985_52190049_52190993_52191109_52191430_52191862_52192056
transcript_203846.nic	chrX	+	2989	12	NIC	ENSG00000154545.17	novel	2537	13	NA	NA	-29	0	intron_retention	FALSE	canonical	3	659	junction_1	158.208357230333	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	52184846	52192268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_52184966_52185891_52186133_52186396_52187846_52187948_52188013_52188205_52188286_52188673_52188766_52189386_52189467_52189551_52189595_52189985_52190049_52190993_52191109_52191430_52191862_52192056
transcript_203848.known	chrX	+	2996	12	FSM	ENSG00000154545.17	ENST00000477634.5	2996	12	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	414.642412903591	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	52184911	52192268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_52184966_52185831_52186133_52186396_52187846_52187948_52188013_52188205_52188286_52188673_52188766_52189386_52189467_52189551_52189595_52189985_52190049_52190993_52191109_52191430_52191874_52192056
transcript_203850.nic	chrX	+	3017	12	NIC	ENSG00000154545.17	novel	2618	14	NA	NA	-36	0	intron_retention	FALSE	canonical	3	166	junction_1	294.240498698565	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	52184839	52192268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_52184966_52185870_52186133_52186396_52187846_52187948_52188013_52188205_52188286_52188673_52188766_52189386_52189467_52189551_52189595_52189985_52190049_52190993_52191109_52191430_52191862_52192056
transcript_203855.nic	chrX	+	2966	12	NIC	ENSG00000154545.17	novel	2483	13	NA	NA	-36	0	intron_retention	FALSE	canonical	3	283	junction_1	261.409908947361	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	52184839	52192268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_52184966_52185921_52186133_52186396_52187846_52187948_52188013_52188205_52188286_52188673_52188766_52189386_52189467_52189551_52189595_52189985_52190049_52190993_52191109_52191430_52191862_52192056
transcript_203879.known	chrX	+	627	5	FSM	ENSG00000155622.7	ENST00000286049.3	627	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCTTGCACATCTTCTG	NA	False	NA	NA	False	AATAAA	-21	NA	52369020	52375680	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_52369215_52370006_52370096_52370566_52370673_52372543_52372670_52375568
transcript_203880.nnic	chrX	+	2894	4	NNC	ENSG00000179304.18	novel	2942	4	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_1	55.5117605157282	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTAGAATTCAGGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	52896937	52908560	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_52898213_52899467_52899542_52900567_52900661_52907108
transcript_203881.known	chrX	+	2942	4	FSM	ENSG00000179304.18	ENST00000593751.7	2942	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	20.8326666559997	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGGGTGTAGAATTCAG	NA	False	NA	NA	False	AATAAA	-16	NA	52897399	52908556	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_52898727_52899467_52899542_52900567_52900661_52907108
transcript_203885.known	chrX	+	3746	3	FSM	ENSG00000179304.18	ENST00000416841.8	3757	3	11	0	11	0	multi-exon	FALSE	canonical	3	121	junction_1	4.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTAGAATTCAGGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	52897340	52908560	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_52899542_52900567_52900661_52907108
transcript_203886.known	chrX	-	2942	4	FSM	ENSG00000268350.8	ENST00000596733.7	2942	4	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_3	22.1058061754523	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGGGTGTAGAATTCAG	NA	False	NA	NA	False	AATAAA	-16	NA	52958414	52947257	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_52948706_52955153_52955247_52956272_52956347_52957087
transcript_203887.known	chrX	-	1677	4	FSM	ENSG00000268350.8	ENST00000612846.5	1677	4	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_3	55.934485486743	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTAGAATTCAGGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	52957659	52947253	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_52948706_52955153_52955247_52956272_52956347_52957601
transcript_203888.known	chrX	-	1733	4	FSM	ENSG00000268350.8	ENST00000619518.5	1733	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	53.1099488482776	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTAGAATTCAGGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	52958518	52947253	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_52948706_52955153_52955247_52956272_52956347_52958404
transcript_203889.known	chrX	-	2188	4	FSM	ENSG00000268350.8	ENST00000619586.5	2188	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	54.9929288383718	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTAGAATTCAGGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	52957247	52947253	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_52948706_52955153_52955247_52956272_52956756_52957087
transcript_203892.known	chrX	-	3791	3	FSM	ENSG00000268350.8	ENST00000622447.5	3791	3	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	3.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTAGAATTCAGGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	52958518	52947253	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_52948706_52955153_52955247_52956272
transcript_203893.known	chrX	-	1694	5	FSM	ENSG00000268350.8	ENST00000622197.5	1694	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	53.9814783050631	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTAGAATTCAGGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	52958446	52947253	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_52948706_52955153_52955244_52956272_52956347_52957087_52957124_52958404
transcript_203894.nnic	chrX	+	2327	8	NNC	ENSG00000184205.14	novel	2815	7	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	50.6710076908696	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCCGCTTCGAGTCTTT	53081114	True	NA	16	True	AATAAA	-17	NA	53082357	53088540	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_53082562_53083058_53083306_53084544_53084623_53084754_53084867_53084953_53085100_53085226_53085322_53085630_53086311_53087775
transcript_203895.known	chrX	+	2815	7	FSM	ENSG00000184205.14	ENST00000375442.8	2815	7	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	22.7791327510265	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCCGCTTCGAGTCTTT	53081123	True	NA	16	True	AATAAA	-17	NA	53082366	53088540	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_53083306_53084544_53084623_53084754_53084867_53084953_53085100_53085226_53085322_53085630_53086311_53087775
transcript_20390.known	chr1	+	845	9	FSM	ENSG00000143774.17	ENST00000366723.5	845	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	581.446848387709	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAACATCCTGGGGTGAC	228125289	True	NA	NA	False	NA	NA	NA	228140301	228148833	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_228140364_228145510_228145625_228146025_228146068_228146841_228146939_228147405_228147545_228147614_228147700_228148233_228148285_228148370_228148457_228148664
transcript_203902.nic	chrX	+	1388	5	ISM	ENSG00000184205.14	ENST00000375442.8	2815	7	-45	3246	-45	-545	5prime_fragment	FALSE	canonical	3	102	junction_1	12.6959639255946	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAAGAAGCAAGAAATGA	53081078	True	NA	NA	False	GATAAA	-1	NA	53082321	53085294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_53083306_53084544_53084623_53084754_53084867_53084953_53085100_53085226
transcript_203904.known	chrX	+	2607	4	FSM	ENSG00000184205.14	ENST00000553557.5	2607	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	61.2118361829548	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAAGAAAAAGCATTCTG	53081123	True	NA	NA	False	NA	NA	NA	53082366	53086413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_53083306_53084531_53084867_53084953_53085100_53085226
transcript_203913.known	chrX	+	1063	3	FSM	ENSG00000232593.7	ENST00000366185.2	1063	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCAACAAATGCTGCACAT	53093034	True	NA	NA	False	NA	NA	NA	53094156	53142707	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_53094285_53094399_53094475_53141847
transcript_20392.known	chr1	+	1065	9	FSM	ENSG00000143774.17	ENST00000492871.5	1065	9	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_4	535.069840651667	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCATAAATGAGTGGAATG	228125277	True	NA	NA	False	AATAAA	-20	NA	228140289	228148946	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_228140364_228141123_228141289_228145510_228145625_228146025_228146068_228146860_228146939_228147405_228147545_228147614_228147700_228148370_228148457_228148664
transcript_203945.known	chrX	-	5677	26	FSM	ENSG00000126012.13	ENST00000404049.7	5677	26	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_22	40.1573704318398	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAACAAGAAACTTGGTT	NA	False	NA	19	True	AAGAAA	-8	NA	53225176	53192256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_53193333_53193436_53193637_53193772_53193852_53194138_53194739_53194930_53195069_53195230_53195411_53195915_53196055_53196685_53197045_53197770_53197877_53198489_53198638_53198763_53198889_53198976_53199159_53201549_53201745_53201853_53201974_53210413_53210577_53210675_53210858_53211496_53211656_53211786_53211907_53214688_53214848_53215794_53215977_53216073_53216198_53217142_53217275_53217795_53217967_53218275_53218399_53220838_53220917_53224739
transcript_203949.known	chrX	-	5245	26	FSM	ENSG00000126012.13	ENST00000375379.7	5245	26	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_10	31.0848130121447	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGGCCTCAAGGATCCTC	NA	False	NA	NA	False	NA	NA	NA	53225422	53192928	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_53193333_53193436_53193637_53193781_53193852_53194138_53194739_53194930_53195069_53195230_53195411_53195915_53196055_53196685_53197045_53197770_53197877_53198489_53198638_53198763_53198889_53198976_53199159_53201549_53201745_53201853_53201974_53210413_53210577_53210675_53210858_53211496_53211656_53211786_53211907_53214688_53214848_53215794_53215977_53216073_53216198_53217142_53217278_53217795_53217967_53218275_53218399_53220838_53220917_53224739
transcript_203987.nnic	chrX	-	1701	3	NIC	ENSG00000124313.18	novel	475	3	NA	NA	-2	-1	intron_retention	FALSE	canonical	2	19	junction_1	7.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTCTGTCTGATGTATAT	NA	False	NA	-8	True	AATAAA	-12	NA	53321352	53266329	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_53267065_53291894_53291925_53320416
transcript_203988.known	chrX	-	835	2	FSM	ENSG00000124313.18	ENST00000485377.5	835	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTGTCTGATGTATATT	NA	False	NA	-7	True	AATAAA	-13	NA	53281594	53266328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_53267065_53281495
transcript_203989.known	chrX	-	922	3	FSM	ENSG00000124313.18	ENST00000639161.2	922	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTCTGATGTATATTC	NA	False	NA	-6	True	AATAAA	-14	NA	53281584	53266327	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_53267065_53279563_53279660_53281495
transcript_203990.known	chrX	-	9710	25	FSM	ENSG00000072501.19	ENST00000322213.9	9710	25	0	0	0	0	multi-exon	TRUE	canonical	3	299	junction_24	56.1262063715932	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGTGTCTTTGTTCC	NA	False	NA	-4	True	AATAAA	-14	NA	53422654	53374148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_53380187_53380619_53380731_53381017_53381088_53382231_53382384_53382505_53382661_53383096_53383254_53394777_53394889_53396226_53396381_53396471_53396618_53399588_53399731_53403565_53403673_53403776_53403894_53405011_53405150_53405244_53405392_53405492_53405673_53405770_53405957_53409061_53409270_53409420_53409504_53411760_53411902_53411994_53412254_53412899_53413139_53413231_53413436_53414757_53414871_53414980_53415170_53422491
transcript_203994.nic	chrX	-	2642	16	ISM	ENSG00000072501.19	ENST00000322213.9	9710	25	-56	25470	18	5180	5prime_fragment	FALSE	canonical	3	299	junction_15	56.3964537892233	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATGAAAATGAGATAGAAAA	NA	False	NA	NA	False	GATAAA	-31	NA	53422710	53399618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_53399731_53403565_53403673_53403776_53403894_53405011_53405150_53405244_53405392_53405492_53405673_53405770_53405957_53409061_53409270_53409420_53409504_53411760_53411902_53411994_53412254_53412899_53413139_53413231_53413436_53414757_53414871_53414980_53415170_53422491
transcript_203995.nic	chrX	-	2317	14	NIC	ENSG00000072501.19	novel	9930	26	NA	NA	-18	5180	combination_of_known_junctions	FALSE	canonical	3	69	junction_13	102.196990425702	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATGAAAATGAGATAGAAAA	NA	False	NA	NA	False	GATAAA	-31	NA	53422687	53399618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_53399731_53403565_53403673_53403776_53403894_53405011_53405150_53405244_53405392_53405492_53405673_53405770_53405957_53409061_53409270_53409420_53409504_53411760_53411902_53411994_53412254_53412899_53413139_53413231_53413436_53422491
transcript_204000.nic	chrX	-	850	5	ISM	ENSG00000072501.19	ENST00000322213.9	9710	25	-56	38865	18	-1019	5prime_fragment	FALSE	canonical	3	299	junction_4	29.3513202428783	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGATCGAGAAGGACAAGA	NA	False	NA	NA	False	AATGAA	-45	NA	53422710	53413013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_53413139_53413231_53413436_53414757_53414871_53414980_53415170_53422491
transcript_204001.nic	chrX	-	682	4	ISM	ENSG00000072501.19	ENST00000322213.9	9710	25	-56	39126	18	-1280	5prime_fragment	FALSE	canonical	3	299	junction_3	12.9185482500507	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCGGCTGAACGCAAGG	NA	False	NA	-34	True	AAGAAA	-3	NA	53422710	53413274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_53413436_53414757_53414871_53414980_53415170_53422491
transcript_204002.nic	chrX	-	625	4	ISM	ENSG00000072501.19	ENST00000322213.9	9710	25	-56	39183	18	-1337	5prime_fragment	FALSE	canonical	3	299	junction_3	12.9185482500507	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAAATGGTGAAGGCTG	NA	False	NA	4	True	NA	NA	NA	53422710	53413331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_53413436_53414757_53414871_53414980_53415170_53422491
transcript_204006.known	chrX	-	916	6	FSM	ENSG00000072506.14	ENST00000375304.9	916	6	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	277.55821011096	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGCAGTGTTGTGTGCT	NA	False	NA	-3	True	AATAAA	-20	NA	53434356	53431257	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_53431595_53431824_53431907_53431987_53432117_53432246_53432412_53433721_53433887_53434318
transcript_204009.known	chrX	-	954	6	FSM	ENSG00000072506.14	ENST00000168216.11	954	6	0	0	0	0	multi-exon	FALSE	canonical	3	644	junction_5	73.6977611600244	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTAGGCAGTGTTGTGT	NA	False	NA	-6	True	AATAAA	-17	NA	53434370	53431260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_53431595_53431797_53431907_53431987_53432117_53432246_53432412_53433721_53433887_53434318
transcript_20401.known	chr1	+	656	8	FSM	ENSG00000143774.17	ENST00000453943.5	656	8	0	0	0	0	multi-exon	FALSE	canonical	3	809	junction_1	198.594654345715	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGGCTTGCTGTCTGT	228125285	True	NA	NA	False	AAGAAA	-16	NA	228140297	228148691	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_228140364_228145510_228145625_228146025_228146068_228146841_228146939_228147405_228147545_228147614_228147700_228148370_228148457_228148664
transcript_204013.known	chrX	-	823	5	FSM	ENSG00000072506.14	ENST00000375298.4	823	5	0	0	0	0	multi-exon	FALSE	canonical	2	34	junction_1	325.657795853255	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTGTAGGCAGTGTTGT	NA	False	NA	-8	True	AATAAA	-15	NA	53434350	53431262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_53431595_53431987_53432117_53432246_53432412_53433721_53433887_53434318
transcript_204017.known	chrX	-	14796	83	FSM	ENSG00000086758.16	ENST00000342160.7	14796	83	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_67	197.101869816266	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTGCTTGCCTTGTGTGG	NA	False	NA	2	True	AATAAA	-27	NA	53684169	53532095	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_53533412_53534006_53534198_53534515_53534698_53535383_53535502_53536146_53536253_53536379_53536668_53537555_53537697_53538336_53538455_53538834_53539081_53539656_53539813_53542442_53542540_53543840_53543969_53544559_53544763_53545028_53545162_53546435_53546593_53546703_53546826_53547672_53548274_53548958_53549506_53550665_53550769_53550900_53551190_53551265_53551481_53552310_53552442_53552637_53552894_53554632_53554921_53557381_53557428_53558654_53558810_53558970_53559061_53559353_53559533_53560187_53560417_53561755_53561925_53562110_53562245_53562830_53562930_53563745_53563822_53564573_53564723_53565066_53565240_53568691_53568875_53569615_53569828_53573749_53573965_53575154_53575222_53575642_53575789_53576899_53577068_53580830_53581027_53583557_53583917_53584185_53584346_53585011_53585189_53586489_53586572_53586781_53586910_53588381_53588535_53589546_53589817_53590403_53590500_53590999_53591123_53592397_53592629_53593363_53593602_53594498_53594622_53595186_53595404_53600117_53600310_53602563_53602659_53603367_53603502_53604588_53604835_53607522_53607700_53608851_53608910_53614533_53614746_53615743_53615836_53616969_53617148_53617339_53617447_53624594_53624676_53625156_53625259_53627409_53627516_53627738_53627880_53628492_53628621_53628751_53628903_53629515_53629617_53630934_53631035_53631413_53631483_53631566_53631615_53632486_53632565_53634235_53634299_53645310_53645464_53647367_53647575_53648211_53648311_53654062_53654132_53680048_53680187_53683873
transcript_20402.known	chr1	+	850	8	FSM	ENSG00000143774.17	ENST00000366722.5	850	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	673.65600135623	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGAGGAGATGCTGCCCC	228125304	True	NA	NA	False	NA	NA	NA	228140316	228148808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_228140364_228145491_228145625_228146025_228146068_228146841_228146939_228147405_228147545_228147620_228147700_228148370_228148540_228148664
transcript_204020.known	chrX	-	598	2	FSM	ENSG00000086758.16	ENST00000474971.1	598	2	0	0	0	0	multi-exon	FALSE	canonical	3	746	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTCCAGTACATAATTC	NA	False	NA	NA	False	ATTAAA	-15	NA	53536651	53535926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_53536253_53536379
transcript_204022.nic	chrX	-	4769	23	NIC	ENSG00000172943.21	novel	6357	22	NA	NA	73	-2	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	18.2745363193147	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCTTTGCTTGGCATTC	NA	False	NA	-6	True	GATAAA	-17	NA	54043989	53936681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_53938060_53939161_53939247_53940179_53940517_53944133_53944244_53962843_53962940_53984913_53985228_53985815_53985950_53987077_53987164_53987765_53987945_53992735_53992840_53993600_53993904_53995692_53995783_53999869_53999962_54002154_54002262_54002594_54002683_54011121_54011285_54014376_54014564_54016594_54016737_54017660_54017822_54022258_54022368_54022757_54022844_54042630_54042821_54043761
transcript_204025.known	chrX	-	6357	22	FSM	ENSG00000172943.21	ENST00000338154.11	6357	22	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_10	13.6273700844844	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTTGCTTGGCATTCTT	NA	False	NA	-4	True	GATAAA	-19	NA	54044473	53936679	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_53939247_53940179_53940517_53944133_53944244_53962843_53962940_53984913_53985228_53985815_53985950_53987077_53987164_53987765_53987945_53992735_53992840_53993600_53993904_53995692_53995783_53999869_53999962_54002154_54002262_54002594_54002683_54011121_54011285_54014376_54014564_54016594_54016737_54017660_54017822_54022258_54022368_54022757_54022844_54042630_54042821_54043761
transcript_204027.known	chrX	-	4651	22	NIC	ENSG00000172943.21	novel	6357	22	NA	NA	-58	-2	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	20.9674188459434	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCTTTGCTTGGCATTC	NA	False	NA	-6	True	GATAAA	-17	NA	54044174	53936681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_53938060_53939161_53939247_53940179_53940517_53944133_53944244_53962843_53962940_53984913_53985228_53985815_53985950_53987077_53987164_53987765_53987945_53992735_53992840_53995692_53995783_53999869_53999962_54002154_54002262_54002594_54002683_54011121_54011285_54014376_54014564_54016594_54016737_54017660_54017822_54022258_54022368_54022757_54022844_54042630_54042821_54043761
transcript_204041.known	chrX	-	1140	2	FSM	ENSG00000184083.12	ENST00000477084.1	1140	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGTTGTGCTTGTTCTTT	NA	False	NA	0	True	AATAGA	-17	NA	54183281	54173788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_54174147_54182499
transcript_20405.known	chr1	+	689	8	FSM	ENSG00000143774.17	ENST00000366721.5	689	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	575.445843122832	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCACCCCCTTGGCAGG	228125319	True	NA	NA	False	NA	NA	NA	228140331	228148752	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_228140364_228145510_228145650_228146025_228146068_228146860_228146939_228147405_228147545_228147614_228147700_228148370_228148457_228148664
transcript_204051.nnic	chrX	-	829	2	NNC	ENSG00000196632.11	novel	715	2	NA	NA	-52	-122	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAAGGAAATGGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	54358057	54333299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_54333793_54357721
transcript_204052.nnic	chrX	-	1146	2	NNC	ENSG00000196632.11	novel	715	2	NA	NA	191	-122	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	0	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAAGGAAATGGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	54358451	54333299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_54333793_54357798
transcript_204053.known	chrX	-	715	2	FSM	ENSG00000196632.11	ENST00000458404.1	715	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTGAAACATGGGTTGAG	NA	False	NA	-94	True	TATAAA	-8	NA	54358642	54333177	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_54333793_54358542
transcript_204057.known	chrX	-	4343	18	FSM	ENSG00000102302.8	ENST00000375135.4	4343	18	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_15	21.3892900794722	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCATAGCACTGCTGTGC	NA	False	NA	2	True	AATACA	-23	NA	54496234	54445453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_54446415_54447310_54447455_54448805_54448968_54449142_54449269_54449658_54449761_54450270_54450302_54455447_54455528_54455691_54455785_54456219_54456367_54456508_54456568_54465450_54465590_54465695_54465853_54467783_54467933_54468786_54468877_54470015_54470458_54470582_54470761_54471313_54471488_54495125
transcript_204061.known	chrX	+	4076	5	FSM	ENSG00000158526.8	ENST00000375151.5	4076	5	0	0	0	0	multi-exon	FALSE	canonical	3	1249	junction_1	30.7652401258303	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCAAAATGTGTGTTTGT	54426539	True	NA	NA	False	AATAAA	-25	NA	54440403	54448032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_54440503_54440689_54440781_54443399_54443492_54444007_54444185_54444415
transcript_204068.known	chrX	+	2638	17	FSM	ENSG00000130119.17	ENST00000674498.1	2638	17	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_16	14.4826134986058	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAAAATTGTGAGAAAAAT	54522072	True	NA	-33	True	NA	NA	NA	54530182	54621521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_54530303_54532519_54532586_54539039_54539102_54540134_54540243_54541272_54541390_54542954_54543039_54543206_54543343_54544222_54544327_54548228_54548374_54550962_54551051_54551567_54551743_54551831_54551975_54552291_54552429_54554564_54554693_54558435_54558656_54560519_54560648_54620844
transcript_204070.nnic	chrX	+	2560	17	NNC	ENSG00000130119.17	novel	2357	16	NA	NA	1	1738	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	15.0893174133226	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGACAGGATGGCCAGACC	54522073	True	NA	NA	False	NA	NA	NA	54530183	54562809	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_54530303_54532519_54532586_54539039_54539102_54540134_54540243_54541272_54541390_54542954_54543039_54543206_54543343_54544222_54544327_54548228_54548374_54550962_54551051_54551567_54551743_54551831_54551975_54552291_54552429_54554564_54554693_54558435_54558656_54560519_54560745_54562306
transcript_204071.nnic	chrX	+	2338	17	NNC	ENSG00000130119.17	novel	2357	16	NA	NA	1	-2015	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	15.0893174133226	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTATGCAACATTTTGTG	54522073	True	NA	4	True	AGTAAA	-14	NA	54530183	54565274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_54530303_54532519_54532586_54539039_54539102_54540134_54540243_54541272_54541390_54542954_54543039_54543206_54543343_54544222_54544327_54548228_54548374_54550962_54551051_54551567_54551743_54551831_54551975_54552291_54552429_54554564_54554693_54558435_54558656_54560519_54560745_54564993
transcript_204072.nnic	chrX	+	2392	17	NNC	ENSG00000130119.17	novel	2357	16	NA	NA	1	1558	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	15.0893174133226	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATCTCAGAATGTTGGCC	54522073	True	NA	NA	False	AATACA	-44	NA	54530183	54562629	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_54530303_54532519_54532586_54539039_54539102_54540134_54540243_54541272_54541390_54542954_54543039_54543206_54543343_54544222_54544327_54548228_54548374_54550962_54551051_54551567_54551743_54551831_54551975_54552291_54552429_54554564_54554693_54558435_54558656_54560519_54560765_54562314
transcript_204075.nnic	chrX	+	2364	17	NNC	ENSG00000130119.17	novel	2357	16	NA	NA	1	-2013	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	15.0893174133226	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGCAACATTTTGTGTT	54522073	True	NA	6	True	AGTAAA	-16	NA	54530183	54565276	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_54530303_54532519_54532586_54539039_54539102_54540134_54540243_54541272_54541390_54542954_54543039_54543206_54543343_54544222_54544327_54548228_54548374_54550962_54551051_54551567_54551743_54551831_54551975_54552291_54552429_54554564_54554693_54558435_54558656_54560519_54560765_54564989
transcript_204080.nic	chrX	+	2737	17	NIC	ENSG00000130119.17	novel	2638	17	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_16	16.593955978006	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAAAATTGTGAGAAAAAT	54522090	True	NA	-33	True	NA	NA	NA	54530200	54621521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_54530420_54532519_54532586_54539039_54539102_54540134_54540243_54541272_54541390_54542954_54543039_54543206_54543343_54544222_54544327_54548228_54548374_54550962_54551051_54551567_54551743_54551831_54551975_54552291_54552429_54554564_54554693_54558435_54558656_54560519_54560648_54620844
transcript_204088.known	chrX	+	2357	16	FSM	ENSG00000130119.17	ENST00000336470.8	2357	16	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	8.38941131559433	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	54522100	True	NA	NA	False	NA	NA	NA	54530210	54561071	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_54530303_54532519_54532586_54539039_54539102_54540134_54540243_54541272_54541390_54542954_54543039_54543206_54543343_54544222_54544327_54548228_54548374_54550962_54551051_54551567_54551743_54551831_54551975_54552291_54552429_54554564_54554693_54558435_54558656_54560519
transcript_204091.known	chrX	+	8684	16	FSM	ENSG00000130119.17	ENST00000360845.3	8684	16	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	12.397132284883	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATATGTCTGCATTTTTT	54522108	True	NA	NA	False	AATAAA	-26	NA	54530218	54567289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_54530420_54532519_54532586_54539039_54539102_54540134_54540243_54541272_54541390_54542954_54543039_54543206_54543343_54544222_54544327_54548228_54548374_54550962_54551051_54551567_54551743_54551831_54551975_54552291_54552429_54554564_54554693_54558435_54558656_54560519
transcript_204099.known	chrX	+	2575	9	FSM	ENSG00000130119.17	ENST00000674300.1	2575	9	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	9.96242942258564	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGTGGAGAGAATCAGAGAG	54522092	True	NA	NA	False	AATAGA	-14	NA	54530202	54550026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_54530303_54532519_54532586_54539039_54539102_54540134_54540243_54541272_54541390_54542954_54543039_54543206_54543343_54544222_54544327_54548228
transcript_204109.known	chrX	+	2224	16	FSM	ENSG00000130119.17	ENST00000674178.1	2224	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	15.428112867965	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCAGGAGAATCGCCTGA	54522098	True	NA	NA	False	NA	NA	NA	54530208	54560940	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_54530303_54532519_54532586_54539039_54539102_54540134_54540239_54541272_54541390_54542954_54543039_54543206_54543343_54544222_54544327_54548228_54548374_54550962_54551051_54551567_54551743_54551831_54551975_54552291_54552429_54554564_54554693_54558435_54558656_54560519
transcript_20412.known	chr1	+	842	7	FSM	ENSG00000143774.17	ENST00000366728.6	842	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	503.510813080403	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGGAATGTGGCCCCAA	228125277	True	NA	NA	False	AATAAA	-29	NA	228140289	228148955	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_228140364_228145510_228145625_228146025_228146068_228146841_228146939_228147405_228147545_228147614_228147700_228148664
transcript_204141.known	chrX	+	2051	13	FSM	ENSG00000102316.17	ENST00000375068.6	2051	13	0	0	0	0	multi-exon	FALSE	canonical	3	757	junction_1	213.158196339401	2194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTATTGCTTTTTTTGGCG	54800603	True	NA	25	True	ATTAAA	-19	NA	54807744	54816015	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_54807803_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247_54815691_54815880
transcript_204154.known	chrX	+	2048	13	FSM	ENSG00000102316.17	ENST00000375058.5	2048	13	0	0	0	0	multi-exon	FALSE	canonical	3	570	junction_1	258.923559612142	1324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGAGTTTATTGCTTT	54803409	True	NA	17	True	ATTAAA	-11	NA	54808370	54816007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_54808434_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247_54815691_54815880
transcript_204161.nic	chrX	+	2228	13	NIC	ENSG00000102316.17	novel	2026	12	NA	NA	-74	0	intron_retention	FALSE	canonical	3	130	junction_1	372.76112212336	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTTATTGCTTTTTTTG	54804024	False	NA	22	True	ATTAAA	-16	NA	54808985	54816012	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_54809224_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247_54815691_54815880
transcript_204166.known	chrX	+	2066	12	FSM	ENSG00000102316.17	ENST00000375053.6	2066	12	0	0	0	0	multi-exon	TRUE	canonical	3	757	junction_1	221.898867590658	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTGGTTTCAGTGGGG	NA	False	NA	29	True	NA	NA	NA	54807598	54815694	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_54807803_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247
transcript_204176.known	chrX	+	1958	12	FSM	ENSG00000102316.17	ENST00000218439.8	1958	12	0	0	0	0	multi-exon	FALSE	canonical	3	570	junction_1	270.114484451952	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTGGTTTCAGTGGGG	54801196	False	NA	29	True	NA	NA	NA	54808337	54815694	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_54808434_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247
transcript_204187.known	chrX	+	2026	12	FSM	ENSG00000102316.17	ENST00000396224.1	2026	12	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	389.332783783906	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTGGTTTCAGTGGGG	54806994	True	NA	29	True	NA	NA	NA	54809059	54815694	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_54809224_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247
transcript_20420.known	chr1	+	7828	3	FSM	ENSG00000181873.13	ENST00000366711.4	7828	3	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_2	1	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTACGGGCTCTATGGTG	228164941	True	NA	7	True	AATAAA	-18	NA	228165803	228182257	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_228166158_228174691_228175030_228175121
transcript_20422.known	chr1	+	20499	81	FSM	ENSG00000154358.23	ENST00000284548.16	20499	81	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	13.9040855057066	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTGATTCTCCTTGCC	NA	False	NA	16	True	AATAAA	-16	NA	228208062	228361250	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_228208186_228211765_228212772_228213440_228213711_228214173_228214435_228214789_228215099_228215562_228215830_228216420_228216703_228217012_228217289_228224458_228224735_228243182_228243459_228244295_228244572_228245412_228245689_228246527_228246804_228249964_228250241_228256650_228256927_228264115_228264392_228268529_228268806_228273769_228274049_228274177_228274445_228274571_228274842_228275759_228276027_228276449_228276717_228276929_228277043_228277159_228277314_228277753_228277859_228278688_228278956_228279174_228279445_228279820_228280088_228280178_228280446_228280529_228280797_228281932_228282206_228283017_228283285_228283502_228283770_228286077_228286351_228286772_228287040_228287693_228287961_228288060_228288325_228288624_228288889_228291897_228292162_228292522_228292787_228293352_228293617_228294151_228294416_228294779_228295044_228306371_228306639_228306900_228307168_228307258_228307532_228308110_228308384_228309098_228309296_228309483_228309560_228315846_228316120_228316708_228316985_228317463_228317752_228317891_228318174_228318883_228319255_228321343_228322215_228323327_228323607_228332859_228332939_228333198_228333324_228333582_228333781_228334511_228334545_228334814_228334914_228335079_228335299_228335790_228335852_228336199_228336271_228337003_228337127_228337243_228337384_228337943_228338145_228338289_228338373_228338852_228339027_228339944_228340102_228340505_228340623_228340723_228340889_228341094_228341254_228341436_228341615_228342118_228342233_228349889_228350058_228350840_228350944_228351320_228351451_228352950_228353063_228356150_228356194_228359596
transcript_20423.known	chr1	+	2487	1	FSM	ENSG00000154358.23	ENST00000663720.1	2487	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-22	NA	228267634	228270121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_228267600_228270100
transcript_204231.known	chrX	+	2597	14	FSM	ENSG00000067445.22	ENST00000445561.5	2597	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	83.5108326601863	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTTTTTTCTGTCTTT	54916853	True	NA	NA	False	ATTAAA	-14	NA	54920815	54931431	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_54920879_54922217_54922292_54922577_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602_54928711_54930740_54931032_54931203
transcript_204237.nic	chrX	+	2569	14	NIC	ENSG00000067445.22	novel	2597	14	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_12	103.745136051951	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGAGTTTTTTCTGTCT	54916833	True	NA	NA	False	ATTAAA	-12	NA	54920795	54931429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_54920879_54922217_54922292_54922623_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602_54928711_54930740_54931032_54931203
transcript_204239.known	chrX	+	1403	14	NNC	ENSG00000067445.22	novel	1404	13	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_11	126.513231059586	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGAGTTTTTTCTGTCT	54916853	True	NA	NA	False	ATTAAA	-12	NA	54920815	54931429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_54920879_54922217_54922292_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602_54928669_54928669_54928711_54930740_54931032_54931203
transcript_20424.known	chr1	-	830	2	FSM	ENSG00000162913.10	ENST00000658152.1	830	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCGCCGCCCGAATGCGCA	-228213474	True	NA	NA	False	NA	NA	NA	228213652	228212308	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_228212908_228213421
transcript_204241.known	chrX	+	2306	13	FSM	ENSG00000067445.22	ENST00000375022.8	2306	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	86.8144573213471	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTTTTTTCTGTCTTT	54916853	True	NA	NA	False	ATTAAA	-14	NA	54920815	54931431	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_54920879_54922217_54922292_54922577_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602_54928711_54931203
transcript_204242.known	chrX	+	4634	13	FSM	ENSG00000067445.22	ENST00000173898.12	4634	13	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	67.8995888549162	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTTTTTTCTGTCTTT	54916861	True	NA	NA	False	ATTAAA	-14	NA	54920823	54931431	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_54920879_54922202_54922292_54922577_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602_54931032_54931203
transcript_204249.nic	chrX	+	4599	13	NIC	ENSG00000067445.22	novel	2597	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	39	junction_2	76.3449772778508	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGAGTTTTTTCTGTCT	54916833	True	NA	NA	False	ATTAAA	-12	NA	54920795	54931429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_54920879_54922217_54922292_54922623_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602_54931032_54931203
transcript_20425.known	chr1	-	2710	6	FSM	ENSG00000154370.16	ENST00000284551.11	2710	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	42.0618592076004	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATCCTGCTGGTGCCTGC	-228405013	True	NA	-4	True	AATAAA	-20	NA	228406835	228393675	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_228395253_228396946_228397048_228397142_228397166_228400963_228401195_228402065_228402162_228406153
transcript_204254.nic	chrX	+	4815	12	ISM	ENSG00000067445.22	ENST00000375022.8	2306	13	-20	4	0	-2	intron_retention	FALSE	canonical	3	231	junction_1	32.7454494977534	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTGGAGTTTTTTCTGT	54916833	True	NA	NA	False	ATTAAA	-10	NA	54920795	54931427	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_54920879_54922217_54922292_54922577_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602
transcript_204258.known	chrX	+	1115	12	FSM	ENSG00000067445.22	ENST00000399736.5	1115	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	116.444148283293	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTTTTTTCTGTCTTT	54916853	True	NA	NA	False	ATTAAA	-14	NA	54920815	54931431	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_54920879_54922217_54922292_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602_54928711_54931203
transcript_204261.nic	chrX	+	4931	12	NIC	ENSG00000067445.22	novel	2597	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	231	junction_1	28.622363099882	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGAGTTTTTTCTGTCT	54916833	True	NA	NA	False	ATTAAA	-12	NA	54920795	54931429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_54920879_54922217_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602_54931032_54931203
transcript_204274.known	chrX	+	3239	6	FSM	ENSG00000169188.5	ENST00000374987.4	3239	6	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_4	9.26066952223218	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTTTGTGCTTTATTTT	54997884	True	NA	3	True	AATAAA	-14	NA	55000362	55009057	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_55000580_55001545_55001630_55002250_55002432_55002961_55003109_55003798_55003869_55006517
transcript_204278.known	chrX	+	728	5	FSM	ENSG00000169188.5	ENST00000471758.1	728	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	73.3974624901979	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTGCCTGAGGTGAT	54997914	True	NA	NA	False	NA	NA	NA	55000392	55006757	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_55000580_55001545_55001630_55002961_55003109_55003798_55003869_55006517
transcript_20428.known	chr1	-	682	5	FSM	ENSG00000154370.16	ENST00000602582.5	682	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	43.4913784559653	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGAGATCCCCTTCTCGGG	-228406177	False	NA	NA	False	NA	NA	NA	228406187	228394824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_228395253_228396946_228397048_228397142_228397166_228402065_228402162_228406153
transcript_204280.known	chrX	-	1179	4	FSM	ENSG00000182518.14	ENST00000358460.8	1179	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	88.4646822183859	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGATCTGTGTCTCTCT	NA	False	NA	-4	True	AATAAA	-22	NA	55161310	55143101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_55143876_55146180_55146312_55159128_55159229_55161136
transcript_204281.known	chrX	-	1170	3	FSM	ENSG00000182518.14	ENST00000477847.6	1170	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	93	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTAGAGTGTGCACTTCA	NA	False	NA	NA	False	NA	NA	NA	55161119	55145386	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_55146312_55159128_55159229_55160974
transcript_204282.known	chrX	-	1109	3	FSM	ENSG00000182518.14	ENST00000472571.2	1109	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	87.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACTGCACAATTCTGTC	NA	False	NA	NA	False	NA	NA	NA	55161182	55145355	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_55146312_55159121_55159229_55161136
transcript_204285.known	chrX	-	1067	4	FSM	ENSG00000182518.14	ENST00000332132.8	1067	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	98.346326825154	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGATCTGTGTCTCTCT	NA	False	NA	-4	True	AATAAA	-22	NA	55161195	55143101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_55143876_55146180_55146312_55159125_55159229_55161136
transcript_204286.known	chrX	+	1440	1	FSM	ENSG00000187601.5	ENST00000342972.3	1440	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTGCGCATTTTCTGAC	55451181	True	NA	16	True	AATAAA	-17	NA	55452126	55453566	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_55452100_55453600
transcript_204287.known	chrX	-	4643	3	FSM	ENSG00000247746.5	ENST00000500968.4	4643	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGTTCAGTTATTTGCT	NA	False	NA	0	True	AATAAA	-18	NA	55489848	55484615	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_55488989_55489168_55489366_55489775
transcript_20429.known	chr1	-	2511	5	FSM	ENSG00000154370.16	ENST00000366699.3	2511	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	46.7566840141599	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGCAA	-228404978	True	NA	NA	False	NA	NA	NA	228406800	228395533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_228397048_228397142_228397166_228400963_228401195_228402065_228402162_228406153
transcript_204291.known	chrX	+	1573	11	FSM	ENSG00000083750.13	ENST00000262850.7	1573	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	19.6471371960395	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAATATTGTTTCACACA	55716999	False	NA	NA	False	NA	NA	NA	55717884	55758348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_55718420_55719313_55719348_55722185_55722286_55727306_55727391_55729293_55729361_55731363_55731587_55751100_55751197_55753391_55753515_55755840_55755933_55757215_55757332_55758245
transcript_204293.known	chrX	+	2051	10	FSM	ENSG00000083750.13	ENST00000374941.9	2051	10	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_6	11.8883696667513	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTCTATTTTTCTT	55716863	True	NA	NA	False	AATAAA	-17	NA	55717748	55758774	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_55718420_55719313_55719348_55722185_55722286_55729293_55729361_55731363_55731587_55751100_55751197_55753391_55753515_55755840_55755933_55757215_55757332_55758245
transcript_204296.nic	chrX	+	2100	2	ISM	ENSG00000083750.13	ENST00000262850.7	1573	11	-175	37645	-39	-11005	5prime_fragment	FALSE	canonical	3	57	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCGGACATGATGGTGCA	55716824	True	NA	NA	False	AATATA	-19	NA	55717709	55720703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_55718420_55719313
transcript_204300.known	chrX	+	9096	6	FSM	ENSG00000102349.18	ENST00000468660.6	9096	6	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_1	3.31058907144937	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGCCATTTTCTTGACT	56231914	True	NA	9	True	AATAAA	-21	NA	56232355	56291531	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_56233342_56250230_56250305_56265179_56265745_56269377_56269490_56270181_56270322_56284312
transcript_204303.known	chrX	+	713	2	FSM	ENSG00000230105.1	ENST00000446028.1	713	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCTCATGGACAGGAAGAA	56618178	True	NA	NA	False	AAGAAA	-15	NA	56618390	56624458	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_56618514_56623868
transcript_204308.known	chrX	-	1717	6	FSM	ENSG00000204271.13	ENST00000475785.7	1717	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	23.2602665504934	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTACACTTGTATAAGAGAT	NA	False	NA	-59	True	NA	NA	NA	56995527	56976438	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_56977197_56978291_56978418_56978579_56978661_56984265_56984479_56994722_56994950_56995215
transcript_204309.known	chrX	-	2998	6	FSM	ENSG00000204271.13	ENST00000639956.1	2998	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	20.9284495364563	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATAAATCTTTTCAAATA	NA	False	NA	-24	True	NA	NA	NA	56995533	56975141	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_56977197_56978291_56978422_56978579_56978661_56984265_56984479_56994722_56994950_56995241
transcript_204310.known	chrX	-	3121	6	FSM	ENSG00000204271.13	ENST00000638819.1	3121	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	22.6892044814268	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATAAATCTTTTCAAATA	NA	False	NA	-24	True	NA	NA	NA	56995553	56975141	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_56977197_56978291_56978499_56978579_56978661_56984265_56984479_56994722_56994950_56995215
transcript_204311.known	chrX	-	2938	5	FSM	ENSG00000204271.13	ENST00000640131.1	2938	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	5.62916512459885	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGAGTTTGACTCTTTT	NA	False	NA	-2	True	AATAAA	-15	NA	56995555	56975119	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_56977197_56978579_56978661_56984265_56984479_56994722_56994950_56995215
transcript_204312.known	chrX	-	1620	5	FSM	ENSG00000204271.13	ENST00000478405.1	1620	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	7.36121593216773	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTCTCTAACAGTGTGA	NA	False	NA	-2	True	AATAAA	-20	NA	56995525	56976381	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_56977197_56978579_56978661_56984265_56984479_56994722_56994950_56995241
transcript_204313.known	chrX	-	2543	5	FSM	ENSG00000204271.13	ENST00000640187.1	2543	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	14.5494845269515	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCCAGACATCGCATTTT	NA	False	NA	NA	False	NA	NA	NA	56995507	56975401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_56977197_56978579_56978661_56984265_56984479_56994722_56994950_56995280
transcript_204319.known	chrX	-	4299	4	FSM	ENSG00000204271.13	ENST00000639888.1	4299	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	2.05480466765633	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATAAATCTTTTCAAATA	NA	False	NA	-24	True	NA	NA	NA	56995555	56975141	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_56978661_56984265_56984479_56994722_56994950_56995215
transcript_204320.known	chrX	-	3719	4	FSM	ENSG00000204271.13	ENST00000639482.1	3719	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	7.40870359029762	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTGTAAACCCAAAATAAAAT	NA	False	NA	NA	False	CATAAA	-12	NA	56995530	56975670	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_56978661_56984265_56984479_56994722_56994950_56995241
transcript_204321.known	chrX	-	1954	4	FSM	ENSG00000204271.13	ENST00000640728.1	1954	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	23.5843639350783	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTTTGAAAGTATATAGAGA	NA	False	NA	NA	False	CATAAA	-21	NA	56995539	56981513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_56982704_56984265_56984479_56994722_56994950_56995215
transcript_204323.known	chrX	-	4445	2	FSM	ENSG00000204271.13	ENST00000374919.6	4445	2	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTCCTGTGTATATTT	NA	False	NA	1	True	ATTAAA	-20	NA	56995541	56990830	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_56994950_56995215
transcript_204324.known	chrX	-	4461	2	FSM	ENSG00000204271.13	ENST00000638386.1	4461	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTTCTGAATTTTGC	NA	False	NA	-63	True	NA	NA	NA	56995647	56990894	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_56994950_56995241
transcript_204325.known	chrX	+	896	4	FSM	ENSG00000204272.13	ENST00000637096.1	896	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	503.985008595384	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCGCTGTGTTAGATCTAT	56723827	True	NA	17	True	AATAAA	-11	NA	56729240	56817569	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_56729590_56732062_56732200_56811019_56811180_56817319
transcript_204326.known	chrX	+	2344	3	FSM	ENSG00000204272.13	ENST00000374922.9	2344	3	0	0	0	0	multi-exon	FALSE	canonical	3	904	junction_2	88	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAAAGATAAACTGG	56723829	True	NA	NA	False	AATAAA	-1	NA	56729242	56819179	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_56729590_56732062_56732200_56817319
transcript_204337.known	chrX	-	725	3	FSM	ENSG00000186787.10	ENST00000374910.3	725	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	10	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTGTGTAAGCCCTT	NA	False	NA	-2	True	AATACA	-18	NA	57121315	57119681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_57120102_57120404_57120632_57121237
transcript_204339.known	chrX	-	401	2	FSM	ENSG00000186787.10	ENST00000460948.1	401	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGGCTGGGAGTTGTGA	NA	False	NA	NA	False	NA	NA	NA	57120590	57118550	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_57118766_57120404
transcript_204340.known	chrX	-	1258	2	FSM	ENSG00000186787.10	ENST00000333933.3	1258	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCTGTGTGTAAGCCCT	NA	False	NA	-3	True	AATACA	-17	NA	57121546	57119682	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_57120632_57121237
transcript_204341.known	chrX	-	1152	2	FSM	ENSG00000186787.10	ENST00000275988.5	1152	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTGTGTAAGCCCTT	NA	False	NA	-2	True	AATACA	-18	NA	57121491	57119681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_57120635_57121292
transcript_204342.nnic	chrX	-	1422	2	NNC	ENSG00000186787.10	novel	1261	2	NA	NA	-7	-2	intron_retention	FALSE	canonical	3	25	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATGCTGTGTGTAAGCC	NA	False	NA	-5	True	AATACA	-15	NA	57121555	57119684	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_57120632_57121080
transcript_204343.known	chrX	-	1319	2	FSM	ENSG00000147059.9	ENST00000374906.4	1091	2	-228	0	-102	0	multi-exon	FALSE	canonical	3	20	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTCTGTAAGCCCTT	NA	False	NA	NA	False	AATACA	-18	NA	57137625	57135649	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_57136603_57137259
transcript_204344.known	chrX	+	1980	11	FSM	ENSG00000165591.7	ENST00000374900.5	1980	11	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_7	6.3718129288296	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCGTGTCTGTTTTGGGT	57286601	True	NA	4	True	AATAAA	-16	NA	57286705	57489193	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_57287018_57292497_57292581_57310592_57310730_57331597_57331808_57341270_57341391_57378650_57378787_57380911_57381030_57431917_57432038_57446927_57447040_57448523_57448719_57488756
transcript_20435.known	chr1	-	1731	6	FSM	ENSG00000162931.12	ENST00000456946.6	1731	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.24961536185438	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCGCCAGAGGCGCTACC	-228416289	False	NA	NA	False	NA	NA	NA	228416757	228408699	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_228409276_228409388_228409412_228410945_228411177_228413796_228413893_228414643_228415078_228416386
transcript_204353.known	chrX	+	5467	1	FSM	ENSG00000198455.5	ENST00000374888.3	5467	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGCTGTGACTTCATT	NA	False	NA	10	True	AATAAA	-20	NA	57592010	57597477	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_57592000_57597500
transcript_204354.known	chrX	-	5029	1	FSM	ENSG00000198205.7	ENST00000358697.6	5029	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGATTCTGGGGGATCC	NA	False	NA	NA	False	AATAAA	-17	NA	57910458	57905429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_57905400_57910500
transcript_204357.known	chrX	-	980	4	FSM	ENSG00000235437.9	ENST00000665831.1	980	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	18.6607133363712	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTCTGTTCCGTTCTT	NA	False	NA	-5	True	AATAAA	-17	NA	63561071	63426557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_63426997_63432363_63432492_63516909_63517083_63560831
transcript_204358.known	chrX	-	2919	4	FSM	ENSG00000235437.9	ENST00000671033.1	2919	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	24.8506650928211	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATTGAGCTGCTTCTGT	NA	False	NA	-14	True	AATAAA	-8	NA	63561071	63426566	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_63428982_63432363_63432492_63509943_63510080_63560831
transcript_204359.known	chrX	-	2973	4	FSM	ENSG00000235437.9	ENST00000609401.6	2973	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	16.739839372653	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCTTCTGTTCCGTTCT	NA	False	NA	-6	True	AATAAA	-16	NA	63561080	63426558	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_63428982_63432363_63432492_63516909_63517083_63560831
transcript_20436.known	chr1	-	895	1	FSM	ENSG00000181218.6	ENST00000366695.3	895	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	206	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTGCACTTTAATTCT	-228443675	True	NA	-14	True	ATTAAA	-19	NA	228457873	228456978	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_228457000_228457900
transcript_204360.known	chrX	-	816	3	FSM	ENSG00000235437.9	ENST00000669422.1	816	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	8.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTCTGTTCCGTTCTT	NA	False	NA	-5	True	AATAAA	-17	NA	63561080	63426557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_63426997_63432363_63432492_63560831
transcript_204361.known	chrX	-	2814	3	FSM	ENSG00000235437.9	ENST00000609143.7	2816	3	0	2	0	0	multi-exon	FALSE	canonical	3	64	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTGCTTCTGTTCCGTTC	NA	False	NA	-7	True	AATAAA	-15	NA	63561095	63426559	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_63428982_63432363_63432492_63560831
transcript_204362.known	chrX	-	4105	1	FSM	ENSG00000186767.7	ENST00000374884.3	4105	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAATTATCTTTGTATT	NA	False	NA	-9	True	AATAAA	-20	NA	63351332	63347227	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_63347200_63351300
transcript_204366.known	chrX	-	2112	11	FSM	ENSG00000131089.17	ENST00000636102.1	2112	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	64.2731670294844	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTACAGGGAGGCAGATAA	NA	False	NA	-70	True	NA	NA	NA	63754740	63638026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_63638210_63643979_63644049_63655493_63655738_63665885_63666018_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63722761_63722898_63724531_63724712_63754307
transcript_204367.known	chrX	-	5117	11	FSM	ENSG00000131089.17	ENST00000671907.1	5117	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_10	51.8185295044157	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAGTAAAAAGACACCT	NA	False	NA	-17	True	NA	NA	NA	63755078	63634983	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_63638210_63643979_63644049_63655493_63655738_63665885_63666018_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63724531_63724712_63754303_63754677_63754920
transcript_204368.known	chrX	-	1920	10	FSM	ENSG00000131089.17	ENST00000636392.1	1920	10	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_9	44.0440295977772	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTACAGGGAGGCAGATAA	NA	False	NA	-70	True	NA	NA	NA	63754684	63638026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_63638210_63643979_63644049_63655493_63655738_63665885_63666018_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63724531_63724712_63754307
transcript_204369.known	chrX	-	4702	10	FSM	ENSG00000131089.17	ENST00000671741.2	4702	10	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_9	13.3979913733181	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGGCATAGCTCTCGT	NA	False	NA	0	True	AATAAA	-16	NA	63785214	63634966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_63638210_63643979_63644049_63655493_63655738_63665885_63666018_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63724531_63724712_63785115
transcript_20437.nnic	chr1	+	788	4	NNC	ENSG00000168159.15	novel	3118	4	NA	NA	25	-1224	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	427.092495836675	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCAGCTCGTTTGCTTCGT	228476315	True	NA	10	True	AATAAA	-10	NA	228487406	228494964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_228487879_228488959_228489057_228493052_228493235_228494927
transcript_204371.known	chrX	-	1888	10	FSM	ENSG00000131089.17	ENST00000624210.3	1888	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	42.1973611017397	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAACAAAAGTGTTTTCT	NA	False	NA	NA	False	NA	NA	NA	63755078	63637839	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_63638210_63643979_63644049_63655493_63655738_63665885_63666018_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63724531_63724712_63754920
transcript_204374.known	chrX	-	2143	9	FSM	ENSG00000131089.17	ENST00000623517.3	2143	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_8	39.7775062063976	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTCATTGCTTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	63785558	63637689	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_63638210_63643979_63644049_63655493_63655738_63665885_63666018_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63785115
transcript_204377.known	chrX	-	4886	9	FSM	ENSG00000131089.17	ENST00000672513.1	4886	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	55.4887375960203	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTATGGAGTTCAATAA	NA	False	NA	-36	True	NA	NA	NA	63754765	63635002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_63638210_63643979_63644049_63655493_63655738_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63724531_63724712_63754314
transcript_20438.nic	chr1	+	1966	4	NIC	ENSG00000168159.15	novel	3118	4	NA	NA	-66	-1222	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	428.513710399096	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCTCGTTTGCTTCGTCT	NA	False	NA	12	True	AATAAA	-12	NA	228487315	228494966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_228487879_228488959_228489057_228493052_228493275_228493882
transcript_204382.known	chrX	-	2217	10	FSM	ENSG00000131089.17	ENST00000374878.5	2217	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	42.9728596519555	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGGCATAGCTCTCGT	NA	False	NA	0	True	AATAAA	-16	NA	63785546	63634966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_63635409_63643995_63644049_63655493_63655738_63665885_63666018_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63724531_63724712_63785115
transcript_204390.nic	chrX	-	1608	11	ISM	ENSG00000102043.16	ENST00000374852.4	2660	14	-32	63341	-32	0	5prime_fragment	FALSE	canonical	3	30	junction_3	10.0319489631876	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGCACTCAATGTTTGC	NA	False	NA	-22	True	AATAAA	-16	NA	64395484	64331421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_64331758_64336078_64336129_64337267_64337394_64343610_64343721_64345044_64345178_64348659_64348795_64349941_64350071_64354776_64354935_64356175_64356339_64359404_64359528_64395339
transcript_204397.known	chrX	-	2724	5	FSM	ENSG00000126970.16	ENST00000374839.8	2724	5	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	20.3270140453535	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGGAAAATATTAGCACTT	NA	False	NA	NA	False	AATAAA	-35	NA	64976450	64915806	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_64917897_64919041_64919205_64920080_64920254_64921816_64921989_64976324
transcript_204398.known	chrX	-	606	5	FSM	ENSG00000126970.16	ENST00000488831.5	606	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	61.912741015077	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCCAAGAGTCGGTCCCG	NA	False	NA	-42	True	NA	NA	NA	65034669	64917839	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_64917897_64919041_64919205_64920080_64920254_64921816_64921989_65034628
transcript_204399.known	chrX	-	2363	5	FSM	ENSG00000126970.16	ENST00000337990.2	2363	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	61.912741015077	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTCTGGGTAGCTCTTG	NA	False	NA	-12	True	AATACA	-19	NA	65034713	64916381	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_64917897_64919041_64919205_64920080_64920254_64921816_64922244_65034628
transcript_204403.known	chrX	-	841	5	FSM	ENSG00000126970.16	ENST00000476032.1	841	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	61.912741015077	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATATGCCCTCTTTGCAA	NA	False	NA	-60	True	NA	NA	NA	64976363	64917857	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_64917897_64919041_64919205_64920080_64920254_64921816_64922244_64976324
transcript_204407.known	chrX	-	2470	14	FSM	ENSG00000001497.18	ENST00000374811.8	2470	14	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_5	223.859687669115	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGTGTTTGTGAGATG	NA	False	NA	-5	True	AATAAA	-13	NA	65534787	65512581	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_65512902_65514822_65514974_65517986_65518466_65523559_65523708_65524055_65524263_65524563_65524615_65524964_65525051_65528259_65528370_65529211_65529259_65529593_65529879_65531356_65531439_65532560_65532631_65533609_65533736_65534479
transcript_20441.known	chr1	+	3965	3	FSM	ENSG00000116574.6	ENST00000366691.4	3965	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATGGCTCTTGCCTTTT	228735119	True	NA	NA	False	AATAAA	-15	NA	228735478	228746664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_228736005_228737672_228737732_228743284
transcript_204414.known	chrX	-	2386	13	FSM	ENSG00000001497.18	ENST00000374807.9	2386	13	0	0	0	0	multi-exon	FALSE	canonical	3	554	junction_5	75.867574687009	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGTGTTTGTGAGATG	NA	False	NA	-5	True	AATAAA	-13	NA	65534754	65512581	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_65512902_65514822_65514974_65517986_65518466_65523559_65523708_65524055_65524263_65524964_65525051_65528259_65528370_65529211_65529259_65529593_65529879_65531356_65531439_65532560_65532631_65533609_65533736_65534479
transcript_204419.known	chrX	-	2261	12	FSM	ENSG00000001497.18	ENST00000374804.9	2261	12	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_11	223.539225023187	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGGTGTTTGTGAGAT	NA	False	NA	-6	True	AATAAA	-12	NA	65534756	65512582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_65512902_65514822_65514974_65517986_65518466_65523559_65523708_65524055_65524263_65524964_65525051_65528259_65528370_65529211_65529259_65529593_65529879_65531356_65531439_65532560_65532631_65534479
transcript_204429.known	chrX	-	2301	11	FSM	ENSG00000001497.18	ENST00000676986.1	2301	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	248.988835091054	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCCCCAGAGAAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	65534798	65520466	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_65521288_65523559_65523708_65524055_65524263_65524964_65525051_65528259_65528370_65529211_65529259_65529593_65529879_65531356_65531439_65532560_65532631_65533609_65533736_65534479
transcript_204434.known	chrX	+	3960	13	FSM	ENSG00000147065.17	ENST00000360270.7	3960	13	0	0	0	0	multi-exon	FALSE	canonical	3	966	junction_9	63.3052569345987	754	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGACTCAATCGTTCTTT	65656063	True	NA	16	True	AATAAA	-17	NA	65667653	65741931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_65667854_65716817_65716902_65727813_65727910_65729437_65729713_65731106_65731191_65731837_65731985_65733183_65733281_65735266_65735431_65736794_65736926_65737177_65737339_65738524_65738618_65738969_65739195_65739728
transcript_20444.known	chr1	+	2987	8	FSM	ENSG00000168118.12	ENST00000366690.5	2987	8	0	0	0	0	multi-exon	FALSE	canonical	3	464	junction_5	45.6530840319978	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTGTAATTTGTACTGT	229267413	True	NA	NA	False	TTTAAA	-30	NA	229271110	229305894	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_229271371_229286485_229286567_229288728_229288844_229295847_229295911_229297481_229297637_229298976_229299073_229302861_229302990_229303805
transcript_204449.known	chrX	+	4310	21	FSM	ENSG00000089472.18	ENST00000441993.7	4310	21	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_20	34.7250269978297	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAAGACTGAATTTGGTG	66162514	True	NA	14	True	ATTAAA	-16	NA	66164358	66267383	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_66164471_66170557_66170738_66172354_66172600_66173588_66173802_66188358_66188542_66189683_66189939_66192129_66192299_66193501_66193639_66195097_66195230_66197682_66197895_66198877_66199029_66200539_66200753_66203363_66203578_66207194_66207335_66208114_66208247_66255034_66255142_66256104_66256331_66258839_66258980_66260099_66260263_66263643_66263689_66266442
transcript_204451.nic	chrX	+	4373	21	NIC	ENSG00000089472.18	novel	4431	21	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_9	42.5892885594488	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGAATTTGGTGATTTTT	NA	False	NA	20	True	ATTAAA	-22	NA	66164175	66267389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_66164471_66170557_66170738_66172354_66172600_66173588_66173802_66188358_66188542_66189683_66189939_66192129_66192299_66193501_66193639_66195097_66195230_66197811_66197895_66198877_66199029_66200539_66200753_66203363_66203578_66207194_66207335_66208114_66208247_66255034_66255142_66256104_66256331_66258839_66258980_66260099_66260263_66263643_66263689_66266439
transcript_204452.nnic	chrX	+	4483	21	NNC	ENSG00000089472.18	novel	4431	21	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	41.146081222882	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGAATTTGGTGATTTTT	66162375	True	NA	20	True	ATTAAA	-22	NA	66164219	66267389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_66164471_66170532_66170738_66172354_66172600_66173588_66173802_66188358_66188542_66189683_66189939_66192129_66192299_66193501_66193639_66195097_66195230_66197682_66197895_66198877_66199029_66200539_66200753_66203363_66203578_66207194_66207335_66208114_66208247_66255034_66255142_66256104_66256331_66258839_66258980_66260099_66260263_66263643_66263689_66266439
transcript_204455.known	chrX	+	4067	20	FSM	ENSG00000089472.18	ENST00000425114.2	4067	20	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_11	43.8269070769718	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAGAACACTGAAAGACTG	66162538	True	NA	5	True	ATTAAA	-7	NA	66164382	66267374	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_66164471_66170557_66170738_66172354_66172600_66173588_66173802_66188358_66188542_66189683_66189939_66192129_66192299_66193501_66193639_66195097_66195230_66197682_66197895_66198877_66199029_66203363_66203578_66207194_66207335_66208114_66208247_66255034_66255142_66256104_66256331_66258839_66258980_66260099_66260263_66263643_66263689_66266439
transcript_204473.known	chrX	-	3464	7	FSM	ENSG00000131080.15	ENST00000451436.6	3464	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	23.7954243967663	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACCTTGTTTATTCCTC	NA	False	NA	-40	True	AATAAA	-14	NA	66639298	66595641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_66598094_66599473_66599861_66602632_66602798_66604420_66604507_66605047_66605227_66615933_66616031_66639200
transcript_204474.known	chrX	+	10667	8	FSM	ENSG00000169083.18	ENST00000374690.9	10667	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	2.60298102261266	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAATGTCATCAGAGTTC	67543128	True	NA	12	True	CATAAA	-17	NA	67544020	67730619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_67546763_67643255_67643408_67686009_67686127_67711401_67711690_67717477_67717623_67721832_67721964_67722826_67722985_67723685
transcript_204476.known	chrX	-	3296	9	FSM	ENSG00000079482.14	ENST00000679914.1	3296	9	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	2.29128784747792	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAGGAAAGAAAGAAAG	NA	False	NA	NA	False	AAGAAA	-44	NA	68433522	68208047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_68210283_68212107_68212213_68213861_68213973_68234486_68234589_68274737_68274810_68283055_68283118_68299000_68299097_68432866_68433025_68433167
transcript_204477.known	chrX	+	734	7	FSM	ENSG00000181704.12	ENST00000374643.7	734	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	122.088424239702	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGATTCTCACCTTTACT	68496196	True	NA	-61	True	NA	NA	NA	68499048	68531970	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_68499158_68511848_68511978_68513326_68513406_68518769_68518813_68521371_68521498_68522759_68522918_68531880
transcript_204480.known	chrX	+	6134	6	FSM	ENSG00000181704.12	ENST00000374622.3	6134	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	130.466240844136	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACACTGGAAAAAGAAT	68498587	False	NA	2	True	ATTAAA	-10	NA	68498781	68537266	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_68499124_68513326_68513406_68518769_68518813_68521371_68521498_68522759_68522918_68531880
transcript_204484.known	chrX	+	3303	5	FSM	ENSG00000090776.6	ENST00000204961.5	3303	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	7.22841614740048	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGGGTGTAAAATGGTG	68828445	True	NA	81	True	ACTAAA	-23	NA	68829020	68842160	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_68829905_68838616_68838895_68839663_68839757_68839959_68840089_68840241
transcript_204486.nnic	chrX	-	2360	3	NNC	ENSG00000181191.12	novel	2362	2	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_1	116.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGTATAATGGAATTTTT	NA	False	NA	-32	True	ATTAAA	-19	NA	69165522	69160860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_69161944_69162014_69163141_69165371
transcript_204488.known	chrX	-	887	2	FSM	ENSG00000181191.12	ENST00000477231.1	887	2	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	0	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAAGAGGGAGAGGCGAG	NA	False	NA	NA	False	NA	NA	NA	69165449	69162325	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_69163135_69165371
transcript_204489.known	chrX	-	574	2	FSM	ENSG00000181191.12	ENST00000590146.1	574	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTAAAGATGATAAGCTGT	NA	False	NA	NA	False	GGGGCT	-42	NA	69165451	69162804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_69163299_69165371
transcript_204490.known	chrX	-	2755	2	FSM	ENSG00000181191.12	ENST00000361478.1	2755	2	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGGTATAATGGAATTTT	NA	False	NA	-33	True	ATTAAA	-18	NA	69165521	69160861	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_69163467_69165371
transcript_204492.known	chrX	+	4643	7	FSM	ENSG00000158813.18	ENST00000616899.1	4643	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	2.68741924943285	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCGGCGTGAGTACTTCC	NA	False	NA	26	True	AATAAA	-23	NA	69957023	70039469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_69957133_70023217_70023242_70027856_70028037_70029503_70029539_70030468_70030521_70033397_70033529_70035357
transcript_204493.known	chrX	+	1682	7	FSM	ENSG00000089289.16	ENST00000356413.5	1682	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	118.053660115503	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTATCAGCTGCTTTT	70133022	True	NA	27	True	AATAAA	-33	NA	70133446	70166324	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_70133541_70133722_70134136_70134522_70134817_70146632_70146829_70148760_70148841_70150209_70150323_70165832
transcript_204494.known	chrX	+	1862	6	FSM	ENSG00000089289.16	ENST00000342206.10	1862	6	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_5	11.1103555298649	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTATCAGCTGCTTTT	70133024	True	NA	27	True	AATAAA	-33	NA	70133448	70166324	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_70134136_70134522_70134817_70146632_70146829_70148760_70148841_70150209_70150323_70165832
transcript_204499.known	chrX	+	4388	31	FSM	ENSG00000090889.12	ENST00000374403.4	4388	31	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	24.3276020647786	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCCTGAGGAAGCTATTAA	70285100	True	NA	24	True	AATAAA	-21	NA	70290103	70420886	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_70290151_70290437_70290579_70290690_70290806_70296997_70297189_70299112_70299203_70301899_70302067_70302303_70302399_70329404_70329522_70330156_70330333_70333627_70333690_70341798_70341932_70343702_70343762_70343876_70343983_70352599_70352657_70353621_70353808_70374150_70374255_70375203_70375349_70376099_70376211_70386617_70386702_70387183_70387298_70395670_70395827_70395948_70396050_70402565_70402696_70403863_70404035_70404714_70404823_70405827_70405906_70406258_70406355_70406892_70407076_70417887_70418005_70419660_70419784_70420061
transcript_204506.nic	chrX	+	2497	21	ISM	ENSG00000090889.12	ENST00000374403.4	4388	31	-75	25094	-75	-25094	5prime_fragment	FALSE	canonical	3	163	junction_1	19.1953119276557	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATCTGGGGAGAATCCAC	70285025	True	NA	NA	False	AAGAAA	-5	NA	70290028	70395792	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_70290151_70290437_70290579_70290690_70290806_70296997_70297189_70299112_70299203_70301899_70302067_70302303_70302399_70329404_70329522_70330156_70330333_70333627_70333690_70341798_70341932_70343702_70343762_70343876_70343983_70352599_70352657_70353621_70353808_70374150_70374255_70375203_70375349_70376099_70376211_70386617_70386702_70387183_70387298_70395670
transcript_204508.nic	chrX	+	2147	18	ISM	ENSG00000090889.12	ENST00000374403.4	4388	31	-75	44706	-75	-44706	5prime_fragment	FALSE	canonical	3	163	junction_1	18.2233357373979	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAAAGAAGTAATACAGTT	70285025	True	NA	NA	False	AATGAA	-41	NA	70290028	70376180	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_70290151_70290437_70290579_70290690_70290806_70296997_70297189_70299112_70299203_70301899_70302067_70302303_70302399_70329404_70329522_70330156_70330333_70333627_70333690_70341798_70341932_70343702_70343762_70343876_70343983_70352599_70352657_70353621_70353808_70374150_70374255_70375203_70375349_70376099
transcript_204509.nic	chrX	+	2005	16	NIC	ENSG00000090889.12	novel	4388	31	NA	NA	-34	-46692	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	51.7094446563359	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAGGAAGAATTGGTTC	70285066	True	NA	NA	False	CATAAA	-34	NA	70290069	70374194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_70290336_70290437_70290579_70290690_70290806_70296997_70297189_70299112_70299203_70301899_70302067_70302303_70302399_70329404_70329522_70330156_70330333_70333627_70333690_70341798_70341932_70343702_70343762_70343876_70343983_70352599_70352657_70353621_70353808_70374150
transcript_204510.nic	chrX	+	1861	16	ISM	ENSG00000090889.12	ENST00000374403.4	4388	31	-75	46692	-75	-46692	5prime_fragment	FALSE	canonical	3	163	junction_1	18.8639574026472	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAGGAAGAATTGGTTC	70285025	True	NA	NA	False	CATAAA	-34	NA	70290028	70374194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_70290151_70290437_70290579_70290690_70290806_70296997_70297189_70299112_70299203_70301899_70302067_70302303_70302399_70329404_70329522_70330156_70330333_70333627_70333690_70341798_70341932_70343702_70343762_70343876_70343983_70352599_70352657_70353621_70353808_70374150
transcript_204513.nic	chrX	+	1149	9	ISM	ENSG00000090889.12	ENST00000374403.4	4388	31	-75	90619	-75	33079	5prime_fragment	FALSE	canonical	3	163	junction_1	18.9897176124344	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAGAACAAACCTATTGTT	70285025	True	NA	NA	False	ATTAAA	-33	NA	70290028	70330267	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_70290151_70290437_70290579_70290690_70290806_70296997_70297189_70299112_70299203_70301899_70302067_70302303_70302399_70329404_70329522_70330156
transcript_204514.nic	chrX	+	819	6	ISM	ENSG00000090889.12	ENST00000374403.4	4388	31	-75	118827	-75	4871	5prime_fragment	FALSE	canonical	3	163	junction_1	17.7426040929735	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGACAAGTAAGTTACAATT	70285025	True	NA	NA	False	AAGAAA	-6	NA	70290028	70302059	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_70290151_70290437_70290579_70290690_70290806_70296997_70297189_70299112_70299203_70301899
transcript_204518.known	chrX	-	784	8	FSM	ENSG00000120509.11	ENST00000374454.1	784	8	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_7	159.68489379438	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAAGGAGGATGATGATA	NA	False	NA	NA	False	NA	NA	NA	70289945	70286891	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_70287117_70287275_70287337_70287731_70287831_70288116_70288174_70288429_70288514_70289254_70289355_70289521_70289594_70289859
transcript_204520.known	chrX	-	991	7	FSM	ENSG00000120509.11	ENST00000239666.9	991	7	0	0	0	0	multi-exon	TRUE	canonical	3	329	junction_6	33.543090031911	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGTGTGACTTTTGAAT	NA	False	NA	NA	False	AGTAAA	-18	NA	70289927	70286594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_70287117_70287275_70287337_70287731_70287831_70288116_70288174_70288429_70288514_70289254_70289355_70289859
transcript_204522.nic	chrX	-	1284	7	NIC	ENSG00000120509.11	novel	991	7	NA	NA	-36	0	intron_retention	FALSE	canonical	3	56	junction_6	132.964489829261	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGTGTGACTTTTGAAT	NA	False	NA	NA	False	AGTAAA	-18	NA	70289981	70286594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_70287117_70287275_70287337_70287731_70287831_70288116_70288174_70288429_70288514_70289254_70289594_70289859
transcript_204523.known	chrX	+	2438	17	FSM	ENSG00000130055.14	ENST00000453994.6	2438	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	18.0319811376898	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGTGTGCACGTGTTC	70423019	False	NA	41	True	AGTAAA	-26	NA	70423030	70433390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_70423383_70424975_70425090_70425353_70425458_70425762_70425857_70426051_70426112_70426370_70426470_70426647_70426742_70426865_70427012_70427136_70427220_70427312_70427464_70429492_70429715_70429914_70430064_70430973_70431127_70432306_70432455_70432578_70432662_70432911_70432941_70433033
transcript_204524.known	chrX	+	1993	16	FSM	ENSG00000130055.14	ENST00000374382.4	1993	16	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	11.2122948389505	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTCTCAGACTTGTGTG	70423052	True	NA	32	True	AGTAAA	-17	NA	70423313	70433381	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_70423383_70424975_70425090_70425353_70425458_70425762_70425857_70426051_70426112_70426370_70426470_70426647_70426742_70426865_70427012_70427136_70427220_70427312_70427464_70429492_70429715_70429914_70430064_70432306_70432455_70432578_70432662_70432911_70432941_70433033
transcript_204527.known	chrX	+	2171	15	FSM	ENSG00000130055.14	ENST00000536730.5	2171	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	14.5525087254426	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGTGTGCACGTGTTC	70423019	False	NA	41	True	AGTAAA	-26	NA	70423030	70433390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_70423383_70425353_70425458_70425762_70425857_70426051_70426112_70426370_70426470_70426647_70426742_70426865_70427012_70427136_70427220_70427312_70427464_70429492_70429715_70429914_70430064_70432306_70432455_70432578_70432662_70432911_70432941_70433033
transcript_204530.known	chrX	+	2067	14	FSM	ENSG00000130055.14	ENST00000538649.5	2067	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	12.6892770274468	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGTGTGCACGTGTTC	70423019	False	NA	41	True	AGTAAA	-26	NA	70423030	70433390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_70423383_70425762_70425857_70426051_70426112_70426370_70426470_70426647_70426742_70426865_70427012_70427136_70427220_70427312_70427464_70429492_70429715_70429914_70430064_70432306_70432455_70432578_70432662_70432911_70432941_70433033
transcript_204535.known	chrX	+	5074	14	FSM	ENSG00000082458.12	ENST00000374355.7	5074	14	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	44.6251978597705	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGACCAGCTTTGTCTTA	70451801	True	NA	9	True	AATAAA	-21	NA	70452304	70505487	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_70452756_70453636_70453794_70454213_70454317_70479149_70479265_70492106_70492284_70492520_70492597_70493375_70493476_70497179_70497222_70498519_70498571_70499175_70499278_70499876_70500050_70500470_70500581_70500897_70500990_70502162
transcript_20454.known	chr1	+	708	6	FSM	ENSG00000168118.12	ENST00000473894.1	708	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	196.438692726255	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAGATCTTTATGGGGAA	229267496	False	NA	-84	True	NA	NA	NA	229271193	229303894	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_229271371_229295847_229295911_229297481_229297637_229298976_229299073_229302861_229302990_229303805
transcript_204541.known	chrX	+	4529	12	FSM	ENSG00000082458.12	ENST00000542398.1	4529	12	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	19.2534208616555	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATGACCAGCTTTGTCT	70451026	True	NA	7	True	AATAAA	-19	NA	70455095	70505485	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_70455264_70479149_70479265_70492106_70492284_70492520_70492597_70493375_70493476_70497179_70497222_70498519_70498571_70499175_70499278_70499876_70500050_70500470_70500581_70500897_70500990_70502162
transcript_204551.known	chrX	-	2235	12	FSM	ENSG00000165349.12	ENST00000298085.4	2235	12	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_11	78.9273125170053	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAAACTGTGTCCTGT	NA	False	NA	-32	True	ATTAAA	-10	NA	70931125	70925587	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_70925944_70926069_70926179_70926526_70926694_70926874_70927042_70927281_70927385_70927483_70927624_70927797_70928021_70928144_70928258_70928455_70928634_70928843_70929003_70929627_70929999_70930976
transcript_204553.known	chrX	-	2239	12	FSM	ENSG00000165349.12	ENST00000374299.8	2239	12	0	0	0	0	multi-exon	TRUE	canonical	3	194	junction_11	83.7516004534385	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTCCTGTTTTTTGCTT	NA	False	NA	-23	True	AATAAA	-1	NA	70931096	70925578	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_70925944_70926069_70926179_70926526_70926694_70926874_70927042_70927281_70927385_70927483_70927624_70927797_70928021_70928144_70928258_70928455_70928634_70928843_70929003_70929627_70930023_70930976
transcript_20457.known	chr1	+	2799	6	FSM	ENSG00000168118.12	ENST00000618010.4	2799	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	239.286940721804	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGATTTGTAATTTGTAC	229267364	True	NA	NA	False	TTTAAA	-27	NA	229271061	229305891	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_229271371_229295847_229295911_229297519_229297637_229298976_229299073_229302861_229302990_229303805
transcript_204574.known	chrX	+	330	1	FSM	ENSG00000230629.2	ENST00000429775.2	330	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTAATGGTGAAAACCCT	NA	False	NA	-34	True	NA	NA	NA	70962963	70963293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_70963000_70963300
transcript_204576.known	chrX	-	720	4	FSM	ENSG00000147164.12	ENST00000276105.3	720	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	9.56846672960488	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCATGTGGGCACTCTGC	NA	False	NA	83	True	NA	NA	NA	71068403	71060869	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_71061119_71061842_71061968_71062853_71062950_71068153
transcript_204577.known	chrX	-	946	3	FSM	ENSG00000147164.12	ENST00000465030.1	946	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTTCTTAACAGTTTCT	NA	False	NA	NA	False	NA	NA	NA	71068388	71060515	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_71061119_71062853_71062950_71068141
transcript_204578.known	chrX	+	3644	3	FSM	ENSG00000184481.17	ENST00000374259.8	3644	3	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	2	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGGTTTCTGCTGCCTT	71095804	True	NA	13	True	AATAAA	-30	NA	71095850	71103532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_71096982_71100683_71101741_71102076
transcript_204579.nic	chrX	+	2774	3	NIC	ENSG00000184481.17	novel	306	2	NA	NA	-115	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_1	37.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGGTTTCTGCTGCCTT	71099177	False	NA	13	True	AATAAA	-30	NA	71099192	71103532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_71099454_71100683_71101741_71102076
transcript_204582.known	chrX	+	6827	45	FSM	ENSG00000184634.17	ENST00000692304.1	8628	45	152	1649	-8	4	multi-exon	FALSE	canonical	0	0	junction_39	24.8252986798841	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGCGAGTTCTGCATGTC	71115856	True	NA	28	True	AATACA	-22	NA	71118694	71142454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_71118854_71119372_71119478_71119685_71119878_71120013_71120171_71120970_71121153_71121326_71121438_71121561_71121817_71122199_71122347_71122507_71122608_71122737_71122875_71123094_71123227_71123593_71123721_71124158_71124389_71124763_71124845_71124975_71125147_71125350_71125496_71125662_71125714_71126035_71126155_71126340_71126485_71126968_71127133_71127335_71127468_71127892_71128121_71128295_71128441_71128597_71128719_71129113_71129216_71129315_71129430_71129679_71129856_71130034_71130215_71131549_71131622_71132072_71132207_71132376_71132539_71132844_71132957_71133122_71133213_71134356_71134467_71134712_71134849_71135091_71135254_71136280_71136656_71136878_71137030_71137186_71137384_71137560_71137636_71137725_71137944_71140634_71140858_71141229_71141371_71141882_71141965_71142174
transcript_204583.known	chrX	+	6977	45	FSM	ENSG00000184634.17	ENST00000374102.6	6901	45	-73	-3	0	3	multi-exon	TRUE	canonical	2	61	junction_16	20.8107866976529	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGCGAGTTCTGCATGT	71118536	False	NA	27	True	AATACA	-21	NA	71118555	71142453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_71118854_71119372_71119478_71119685_71119878_71120013_71120171_71120970_71121153_71121326_71121438_71121561_71121817_71122199_71122347_71122507_71122608_71122737_71122875_71123094_71123227_71123593_71123721_71124158_71124389_71124763_71124845_71124975_71125147_71125350_71125496_71125662_71125714_71126035_71126155_71126340_71126485_71126968_71127133_71127335_71127468_71127892_71128121_71128295_71128441_71128597_71128719_71129113_71129216_71129315_71129430_71129679_71129856_71130034_71130215_71131549_71131622_71132072_71132207_71132376_71132539_71132844_71132957_71133122_71133213_71134356_71134467_71134712_71134849_71135091_71135254_71136280_71136656_71136878_71137030_71137186_71137393_71137557_71137636_71137725_71137944_71140634_71140858_71141229_71141371_71141882_71141965_71142174
transcript_204589.known	chrX	+	3975	8	FSM	ENSG00000196338.15	ENST00000358741.4	3975	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	25.8622725771952	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTCCCTTGCACAGGC	71143483	True	NA	16	True	AATAAA	-22	NA	71144840	71171201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_71144965_71147549_71148207_71148845_71148906_71153476_71153537_71155213_71155364_71164142_71164329_71167010_71167801_71169253
transcript_204593.known	chrX	+	3913	7	FSM	ENSG00000196338.15	ENST00000374051.7	3913	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	22.0283907719107	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTCCCTTGCACAGGC	71143485	True	NA	16	True	AATAAA	-22	NA	71144842	71171201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_71144965_71147549_71148207_71153476_71153537_71155213_71155364_71164142_71164329_71167010_71167801_71169253
transcript_204597.known	chrX	+	3863	6	FSM	ENSG00000196338.15	ENST00000536169.6	3812	6	-12	-39	-10	0	multi-exon	FALSE	canonical	3	7	junction_2	36.0133308651116	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGCCTCCCTTGCACAG	71143473	True	NA	14	True	AATAAA	-20	NA	71144830	71171199	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_71144965_71147549_71148207_71155213_71155364_71164142_71164329_71167010_71167801_71169253
transcript_204606.known	chrX	-	5536	25	FSM	ENSG00000147130.14	ENST00000314425.9	5536	25	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_11	43.8482230730809	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTTTTCTGGGTGAT	NA	False	NA	-7	True	AATAAA	-15	NA	71254140	71239623	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_71241109_71241226_71241345_71242169_71242425_71242969_71243085_71243828_71243981_71244301_71244471_71244789_71244894_71245338_71245486_71245667_71245843_71245985_71246099_71246352_71246513_71246594_71246693_71247344_71247511_71247733_71247907_71248161_71248313_71248437_71248525_71248685_71248802_71249018_71249170_71249460_71249680_71250025_71250204_71250431_71250727_71251177_71251245_71251557_71251602_71252588_71253275_71254028
transcript_20462.known	chr1	+	531	3	FSM	ENSG00000168118.12	ENST00000481981.1	531	3	0	0	0	0	multi-exon	FALSE	canonical	3	484	junction_2	9.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTTAAAATAATTGATGAT	229267377	True	NA	NA	False	AATAAA	-16	NA	229271074	229288882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_229271371_229286485_229286567_229288728
transcript_204623.known	chrX	+	1710	12	FSM	ENSG00000147140.17	ENST00000450092.6	1710	12	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	730.018736315652	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTGCAGTGTCTAGTTT	71242352	False	NA	NA	False	NA	NA	NA	71283760	71300076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_71283989_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71297939_71298468_71298509_71298706_71298817_71299941
transcript_204625.known	chrX	+	1520	12	FSM	ENSG00000147140.17	ENST00000454976.2	1520	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	731.958405538195	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTGCAGTGTCTAGTTT	71284173	False	NA	NA	False	NA	NA	NA	71284193	71300076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_71284232_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71297939_71298468_71298509_71298706_71298817_71299941
transcript_204633.known	chrX	+	2606	11	FSM	ENSG00000147140.17	ENST00000373841.5	2606	11	0	0	0	0	multi-exon	FALSE	canonical	3	469	junction_1	626.602776885005	1752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTGGTGTTTTTGAA	71242224	True	NA	31	True	ATTAAA	-21	NA	71283632	71301168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_71283722_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71297939_71298468_71298509_71298706_71298817_71299941
transcript_204648.known	chrX	-	1867	7	FSM	ENSG00000147130.14	ENST00000373982.5	1867	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	51.4317238892711	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCAGCCTCTCCTTCCC	NA	False	NA	0	True	AATAAA	-18	NA	71254140	71249200	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_71249680_71250025_71250204_71250431_71250727_71251177_71251251_71251557_71251602_71252588_71253275_71254028
transcript_204649.known	chrX	+	2812	13	FSM	ENSG00000147140.17	ENST00000420903.6	2812	13	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_3	883.528563331272	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTAATTTTCTGTGGTG	71242181	True	NA	23	True	ATTAAA	-13	NA	71283589	71301160	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_71283722_71284396_71284454_71284983_71285098_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71297939_71298468_71298509_71298706_71298817_71299941
transcript_204650.known	chrX	+	2868	13	FSM	ENSG00000147140.17	ENST00000677446.1	2868	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	702.45863856094	7120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTGGTGTTTTTGAA	71254469	True	NA	31	True	ATTAAA	-21	NA	71254813	71301168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_71255001_71283614_71283722_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71297939_71298468_71298509_71298706_71298817_71299941
transcript_204651.known	chrX	+	3596	10	FSM	ENSG00000147140.17	ENST00000678323.1	3596	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	787.133163628589	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTTAATTTTCTGTGG	71242201	True	NA	21	True	ATTAAA	-11	NA	71283609	71301158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_71283722_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297360_71298509_71298706_71298817_71299941
transcript_204652.known	chrX	+	3206	11	FSM	ENSG00000147140.17	ENST00000473525.2	3206	11	0	0	0	0	multi-exon	FALSE	canonical	3	2009	junction_2	234.072723742003	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTTAATTTTCTGTGG	71242201	True	NA	21	True	ATTAAA	-11	NA	71283609	71301158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_71283722_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71298509_71298706_71298817_71299941
transcript_204653.known	chrX	+	2214	3	FSM	ENSG00000147140.17	ENST00000679062.1	2214	3	0	0	0	0	multi-exon	FALSE	canonical	3	469	junction_1	963	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCTGGCCAACATGCTGA	71242235	True	NA	NA	False	NA	NA	NA	71283643	71295018	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_71283722_71290628_71291973_71294226
transcript_204654.known	chrX	-	5253	24	FSM	ENSG00000147130.14	ENST00000373984.7	5253	24	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	56.5015013936386	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGTCTTTTCTGGGTG	NA	False	NA	-9	True	AATAAA	-13	NA	71254129	71239625	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_71241109_71241226_71241345_71242969_71243085_71243828_71243981_71244322_71244471_71244789_71244894_71245338_71245486_71245667_71245843_71245985_71246099_71246352_71246513_71246594_71246693_71247344_71247511_71247733_71247907_71248161_71248313_71248437_71248525_71248685_71248802_71249018_71249170_71249460_71249680_71250025_71250204_71250431_71250727_71251177_71251251_71251557_71251602_71252588_71253275_71254028
transcript_204655.known	chrX	+	2483	12	FSM	ENSG00000147140.17	ENST00000677879.1	2483	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	731.472521416066	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTAATTTTCTGTGGTG	71242216	True	NA	23	True	ATTAAA	-13	NA	71283624	71301160	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_71283722_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294349_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71297939_71298468_71298509_71298706_71298817_71299941
transcript_204658.known	chrX	+	7599	38	FSM	ENSG00000147133.17	ENST00000423759.6	7599	38	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	13.9794799005801	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTAGTGTGGAGAATGGT	71364584	True	NA	28	True	AATAAA	-18	NA	71366356	71466005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_71366495_71367498_71367614_71368053_71368171_71375166_71375287_71376949_71377192_71377602_71377822_71378234_71378454_71378823_71379032_71381742_71381920_71382535_71382664_71382760_71382869_71382990_71383165_71383961_71384136_71384944_71385050_71387260_71387462_71388236_71388379_71388737_71388869_71389584_71389666_71392568_71392719_71392874_71392995_71393300_71393477_71394066_71394246_71397252_71397467_71398571_71398738_71401527_71401740_71406637_71406747_71407573_71407673_71407973_71408152_71421308_71421377_71423116_71423240_71423973_71424067_71424153_71424239_71454169_71454238_71454740_71454858_71458240_71458367_71459551_71459709_71460625_71460804_71463823
transcript_204659.known	chrX	+	6221	40	FSM	ENSG00000147133.17	ENST00000683202.1	6221	40	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_39	17.8992725528838	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATATGTCAGAAATGATAA	71366171	False	NA	NA	False	NA	NA	NA	71366221	71464924	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_71366495_71367498_71367614_71368053_71368171_71375166_71375287_71376949_71377192_71377602_71377822_71378234_71378454_71378823_71379032_71381742_71381920_71382535_71382664_71382760_71382869_71382990_71383165_71383961_71384136_71384944_71385050_71387260_71387462_71388236_71388379_71388737_71388869_71389584_71389666_71392568_71392719_71392874_71392995_71393300_71393477_71394066_71394246_71397252_71397467_71398571_71398738_71401527_71401740_71406637_71406747_71407573_71407673_71407973_71408152_71421308_71421377_71423116_71423240_71423973_71424067_71424153_71424239_71454169_71454238_71454740_71454858_71458240_71458358_71459149_71459252_71459551_71459709_71460625_71460804_71463823_71463889_71464413
transcript_20466.known	chr1	-	5089	3	FSM	ENSG00000154429.11	ENST00000366687.5	5089	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGACTCTTTTGTGAGAA	-229340986	True	NA	NA	False	AATAAA	-19	NA	229342517	229321010	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_229325412_229326737_229327007_229342098
transcript_204664.known	chrX	+	5435	22	FSM	ENSG00000147162.14	ENST00000373719.8	5435	22	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_4	57.5932645973826	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGCTGATGTATTTTGTA	71528734	True	NA	6	True	AATAAA	-19	NA	71533103	71575892	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_71533337_71536177_71536359_71537828_71538073_71544566_71544636_71547906_71548024_71554512_71554593_71555189_71555386_71555953_71556095_71556679_71556781_71556951_71557106_71557194_71557297_71557492_71557673_71559266_71559426_71559587_71559678_71561774_71561901_71562846_71563018_71563129_71563247_71563328_71563500_71564600_71564754_71567499_71567753_71567992_71568117_71573619
transcript_204668.known	chrX	+	3310	22	FSM	ENSG00000147162.14	ENST00000373701.7	3310	22	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	76.4750933918819	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCTATACCTGAGCCTCA	71528753	True	NA	5	True	AATAAA	-18	NA	71533122	71573816	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_71533337_71536207_71536359_71537828_71538073_71544566_71544636_71547906_71548024_71554512_71554593_71555189_71555386_71555953_71556095_71556679_71556781_71556951_71557106_71557194_71557297_71557492_71557673_71559266_71559426_71559587_71559678_71561774_71561901_71562846_71563018_71563129_71563247_71563328_71563500_71564600_71564754_71567499_71567753_71567992_71568117_71573619
transcript_204677.known	chrX	+	1239	4	FSM	ENSG00000102309.15	ENST00000373669.8	1239	4	0	0	0	0	multi-exon	FALSE	canonical	3	1093	junction_1	127.146459731375	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATGTGATTCTTAACAGA	72171876	True	NA	NA	False	AATAAA	-15	NA	72181756	72198340	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_72181829_72186460_72186535_72196784_72196905_72197367
transcript_204680.nnic	chrX	+	461	3	NIC	ENSG00000102309.15	novel	1323	4	NA	NA	-10	191	combination_of_known_splicesites	FALSE	canonical	3	398	junction_1	494.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTTTATACATTTTGTT	72171785	True	NA	NA	False	AATAAA	-19	NA	72181665	72197545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_72181829_72196784_72196905_72197367
transcript_204682.known	chrX	-	4218	2	FSM	ENSG00000186871.7	ENST00000334463.4	4218	2	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTTCCATCCACTTTGT	NA	False	NA	-13	True	ATTAAA	-15	NA	72239027	72204664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_72208699_72238843
transcript_204684.known	chrX	-	1474	7	FSM	ENSG00000198034.11	ENST00000316084.10	1474	7	0	0	0	0	multi-exon	FALSE	canonical	3	9294	junction_6	1390.4663985712	993	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCGGGTCATGTCAGGC	NA	False	NA	NA	False	CATAAA	-21	NA	72277248	72272041	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_72272773_72273231_72273390_72273800_72273973_72275052_72275151_72275543_72275725_72276156_72276235_72277192
transcript_204689.known	chrX	-	1752	12	FSM	ENSG00000285547.1	ENST00000648922.1	1752	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	69.4550214167413	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTTGGACCGAGCCAATG	NA	False	NA	NA	False	NA	NA	NA	72572843	72301810	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_72302245_72302809_72302935_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_204691.known	chrX	-	1231	3	FSM	ENSG00000125931.11	ENST00000246139.9	1231	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	1.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACGGGCCAACTAGAGGT	NA	False	NA	-10	True	AATAAA	-43	NA	72306987	72301649	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_72302245_72302809_72302935_72306476
transcript_204692.known	chrX	-	886	3	FSM	ENSG00000125931.11	ENST00000373619.7	886	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	8.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGGCCAACTAGAGGTGTT	NA	False	NA	-7	True	AATAAA	-22	NA	72307187	72301646	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_72302245_72302809_72302935_72307024
transcript_204696.known	chrX	-	1716	12	FSM	ENSG00000147099.21	ENST00000648731.1	1716	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	70.9011650582102	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGGTGTTGTTTTAGTG	NA	False	NA	-33	True	NA	NA	NA	72572681	72329577	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_72330077_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72494195_72494382_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_204697.known	chrX	-	1807	12	FSM	ENSG00000147099.21	ENST00000647886.1	1807	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	71.1602777114237	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATATCTTTGGTTTTTTT	NA	False	NA	-12	True	NA	NA	NA	72572859	72329556	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_72330077_72330690_72330769_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_204699.known	chrX	-	1754	11	FSM	ENSG00000147099.21	ENST00000373573.9	1754	11	0	0	0	0	multi-exon	FALSE	canonical	1	50	junction_5	51.2722146976313	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTTGTCCCGTTGTCTT	NA	False	NA	-1	True	AATAAA	-16	NA	72572843	72329515	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_72330077_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_204700.known	chrX	-	1941	11	FSM	ENSG00000147099.21	ENST00000649543.1	1941	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	74.3464861308186	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCGAGACCCTGTCCCAA	NA	False	NA	NA	False	NA	NA	NA	72572816	72351143	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72494195_72494382_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_204701.known	chrX	-	1710	10	FSM	ENSG00000147099.21	ENST00000373583.6	1710	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	62.5264388523411	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTTGTCCCGTTGTCTT	NA	False	NA	-1	True	AATAAA	-16	NA	72572877	72329515	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_72330077_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_204702.known	chrX	-	1516	10	FSM	ENSG00000147099.21	ENST00000647654.1	1516	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	66.8028239219767	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATATATCTTTGGTTTTT	NA	False	NA	-14	True	NA	NA	NA	72572843	72329558	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_72330077_72330690_72330769_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72572056_72572110_72572650
transcript_204703.known	chrX	-	1625	10	FSM	ENSG00000147099.21	ENST00000373568.7	1625	10	0	0	0	0	multi-exon	FALSE	canonical	1	50	junction_4	53.6987481749394	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGAGATTCCATCTCTACA	NA	False	NA	NA	False	NA	NA	NA	72572842	72351299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_204704.known	chrX	-	1695	9	FSM	ENSG00000147099.21	ENST00000373589.9	1695	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	56.2088738545792	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATATATCTTTGGTTTT	NA	False	NA	-15	True	NA	NA	NA	72573101	72329559	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_72330077_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72572056_72572110_72572650
transcript_204706.known	chrX	-	2373	8	FSM	ENSG00000147099.21	ENST00000439122.7	2373	8	0	0	0	0	multi-exon	FALSE	canonical	1	26	junction_1	71.5829759718021	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGTCATCATTATTAT	NA	False	NA	-15	True	AATAAA	-18	NA	72573083	72473415	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_72474730_72488932_72489042_72490928_72491007_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_204707.known	chrX	-	747	5	FSM	ENSG00000147099.21	ENST00000373556.8	747	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	69.4712170614565	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTCTCTAAATTCCTTT	NA	False	NA	-1	True	AATAAA	-21	NA	72572856	72567581	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_72567797_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_204708.known	chrX	-	836	4	FSM	ENSG00000147099.21	ENST00000373554.6	836	4	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_2	13.9283882771841	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTCTCTAAATTCCTTT	NA	False	NA	-1	True	AATAAA	-21	NA	72572853	72567581	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_72568031_72568753_72568885_72572056_72572110_72572650
transcript_204709.known	chrX	-	1274	10	FSM	ENSG00000147099.21	ENST00000415409.6	1274	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	68.6819472390177	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATGGAAAAGAATGTAAAG	NA	False	NA	NA	False	AATAAA	-10	NA	72572843	72385108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_72385296_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_20471.known	chr1	-	1491	7	FSM	ENSG00000143632.15	ENST00000366684.7	1491	7	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	4.05859855396197	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCGTGTTTATTTGCTT	-229433966	True	NA	0	True	ATTAAA	-24	NA	229434094	229431244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_229431643_229431720_229431903_229431993_229432186_229432269_229432432_229432555_229432881_229432986_229433128_229434003
transcript_204710.known	chrX	-	747	5	FSM	ENSG00000147099.21	ENST00000650636.1	747	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	87.8674427760362	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTCGTATAATGACTT	NA	False	NA	-2	True	TATAAA	-17	NA	72572816	72562219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_72562475_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_204712.nnic	chrX	-	4349	32	NNC	ENSG00000067177.15	novel	4476	33	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_31	7.72093927095703	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTTTTTCTTTTTTGTG	NA	False	NA	-6	True	NA	NA	NA	72714330	72580626	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_72581176_72582397_72582599_72584248_72584303_72593103_72593275_72602157_72602274_72603118_72603221_72605270_72605401_72605540_72605620_72609623_72609704_72611027_72611185_72618709_72618850_72619213_72619306_72620724_72620902_72623108_72623276_72626970_72627050_72635154_72635300_72636276_72636387_72644361_72644497_72650389_72650469_72652543_72652652_72653434_72653531_72656119_72656243_72657587_72657642_72666150_72666298_72667374_72667474_72676069_72676151_72684497_72684581_72695707_72695877_72705197_72705246_72712778_72712938_72713802_72713942_72714050
transcript_204713.known	chrX	-	6121	31	FSM	ENSG00000067177.15	ENST00000339490.7	6121	31	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_22	6.70290152761391	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTGTTTTTGTGATTGG	NA	False	NA	-2	True	ATTAAA	-30	NA	72714181	72578814	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_72581176_72582397_72582599_72584248_72584303_72593103_72593275_72602157_72602274_72603118_72603221_72605270_72605401_72605540_72605620_72609623_72609704_72611027_72611185_72618709_72618850_72619213_72619306_72620724_72620902_72623108_72623276_72626970_72627050_72635154_72635300_72636276_72636387_72644361_72644497_72650389_72650469_72652543_72652652_72653434_72653531_72656119_72656243_72657587_72657642_72666150_72666298_72667374_72667474_72676069_72676151_72684497_72684581_72695707_72695877_72705197_72705246_72712778_72712938_72713802
transcript_204717.known	chrX	-	5944	30	FSM	ENSG00000067177.15	ENST00000541944.5	5944	30	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_12	9.18575643505669	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTGTTTTTGTGATTGG	NA	False	NA	-2	True	ATTAAA	-30	NA	72714181	72578814	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_72581176_72582397_72582599_72584248_72584303_72593103_72593275_72602157_72602274_72603118_72603221_72605270_72605401_72605540_72605620_72609623_72609704_72611027_72611185_72618709_72618850_72619213_72619306_72623108_72623276_72626970_72627050_72635154_72635300_72636276_72636387_72644361_72644497_72650389_72650469_72652543_72652652_72653434_72653531_72656119_72656243_72657587_72657642_72666150_72666298_72667374_72667474_72676069_72676151_72684497_72684581_72695707_72695877_72705197_72705246_72712778_72712938_72713802
transcript_204723.known	chrX	+	3168	1	FSM	ENSG00000184388.6	ENST00000373521.4	3168	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTTTGTTTCTATTTGT	NA	False	NA	NA	False	ATTAAA	-16	NA	73002938	73006106	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_73002900_73006100
transcript_204724.known	chrX	-	2044	1	FSM	ENSG00000204118.2	ENST00000373518.1	2044	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTAGCCTTCTCATTGAG	NA	False	NA	-9	True	AATAAA	-17	NA	73128080	73126036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_73126000_73128100
transcript_204725.known	chrX	-	2553	1	FSM	ENSG00000186462.9	ENST00000373517.4	2553	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATGTATTTCTTGTTAT	NA	False	NA	-8	True	AATAAA	-36	NA	73214851	73212298	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_73212300_73214900
transcript_204726.known	chrX	+	1642	3	FSM	ENSG00000131264.4	ENST00000373514.3	1642	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	3.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATACTTGTCTGGCATCAA	73446763	True	NA	NA	False	AATAAA	-22	NA	73447052	73455171	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_73447756_73453516_73453663_73454378
transcript_204728.known	chrX	-	1950	6	FSM	ENSG00000230590.12	ENST00000654870.2	3111	6	0	1161	0	-3	multi-exon	FALSE	canonical	1	4	junction_1	14.1081536708387	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCATCCCTGTCAACCACT	NA	False	NA	NA	False	AATAAA	-34	NA	74292607	74202656	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_74203954_74274341_74274411_74280393_74280495_74280930_74281086_74281701_74281849_74292426
transcript_204729.known	chrX	-	1996	6	FSM	ENSG00000230590.12	ENST00000652331.2	1996	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	13.6176356244394	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAACCACTGATTTATGTT	NA	False	NA	NA	False	AATAAA	-44	NA	74293568	74202646	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_74203954_74274341_74274411_74280393_74280495_74280930_74281086_74281701_74281849_74293351
transcript_204730.known	chrX	-	2519	4	FSM	ENSG00000230590.12	ENST00000668224.1	2519	4	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_3	18.006171781426	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGGAGGCTGAGGCAGGA	NA	False	NA	NA	False	AATACA	-42	NA	74292373	74278482	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_74280495_74280930_74281086_74281701_74281849_74292168
transcript_204731.known	chrX	-	2778	4	FSM	ENSG00000230590.12	ENST00000429124.6	2778	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	11.4406682011537	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTTAAAGGTTCCCAATG	NA	False	NA	NA	False	ATTAAA	-19	NA	74292620	74278212	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_74280495_74280930_74281086_74281701_74281849_74292426
transcript_204732.known	chrX	-	2838	4	FSM	ENSG00000230590.12	ENST00000662864.1	2838	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	7.58653778449403	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCATCATCTCAAAATCAC	NA	False	NA	NA	False	NA	NA	NA	74293574	74278181	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_74280495_74280930_74281086_74281701_74281849_74293351
transcript_204740.nnic	chrX	+	542	3	ISM	ENSG00000225470.8	ENST00000415215.1	475	4	-27	95	1	-95	intron_retention	FALSE	canonical	3	231	junction_2	172.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTTGCATTGTTTGTTT	73937038	True	NA	17	True	CATAAA	-17	NA	73944339	73947335	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_73944466_73944583_73944663_73946998
transcript_204742.known	chrX	-	2697	4	FSM	ENSG00000230590.12	ENST00000660224.1	2697	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	19.3620476419435	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGCTCCTGACCTAGTCT	NA	False	NA	NA	False	ATTAAA	-26	NA	74292351	74278125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_74280495_74280930_74281086_74281701_74281849_74292325
transcript_204744.known	chrX	+	1818	6	FSM	ENSG00000225470.8	ENST00000663027.1	1818	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	203.692906111136	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGAATAATTTATACATTA	73937037	True	NA	62	True	AAAAAG	-40	NA	73944338	73999990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_73944466_73944583_73944663_73946998_73947375_73994839_73994962_73998767_73998845_73998953
transcript_204745.known	chrX	+	1292	6	FSM	ENSG00000225470.8	ENST00000660546.1	1292	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	201.630751622861	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATGTTGTTCTGGGCAA	NA	False	NA	1	True	AATATA	-13	NA	73944235	74004677	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_73944466_73944583_73944663_73946998_73947375_73994839_73994962_73998767_73998845_74004269
transcript_204746.known	chrX	+	864	6	FSM	ENSG00000225470.8	ENST00000667294.1	864	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	214.926406009127	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAACTGTAAAACTACTA	73937040	True	NA	-43	True	ATTAAA	-17	NA	73944341	74004633	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_73944466_73944583_73944663_73984443_73984542_73994839_73994962_73998767_73998845_74004269
transcript_204747.known	chrX	+	5352	6	FSM	ENSG00000225470.8	ENST00000660856.1	5352	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_4	191.101439031735	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCACTGCAGCCTGGGCG	73937020	True	NA	NA	False	NA	NA	NA	73944321	74007656	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_73944466_73944583_73944663_73994839_73994962_73998767_73998845_73998953_74000497_74004269
transcript_204750.known	chrX	+	962	5	FSM	ENSG00000225470.8	ENST00000667573.1	962	5	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	217.850149185168	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTATATGTGAAATTGAA	73937016	True	NA	16	True	AATAAA	-28	NA	73944317	74004551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_73944466_73944583_73944663_73946998_73947375_73998767_73998845_74004269
transcript_204754.known	chrX	+	3950	5	FSM	ENSG00000225470.8	ENST00000655090.1	3950	5	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_4	199.857918281963	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCGACAAAGACTGTCAAAA	NA	False	NA	NA	False	NA	NA	NA	73944196	74007672	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_73944466_73944583_73944663_73994839_73994962_73998767_73998845_74004269
transcript_204755.known	chrX	+	5113	5	FSM	ENSG00000225470.8	ENST00000657179.1	5113	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	224.87037932996	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATACAGAAAATTAGCCA	73937015	True	NA	NA	False	NA	NA	NA	73944316	74007534	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_73944466_73944583_73944663_73998767_73998845_73998953_74000497_74004269
transcript_204757.known	chrX	+	3758	4	FSM	ENSG00000225470.8	ENST00000660836.1	3758	4	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_3	193.634248577627	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGTCAAAAAAAAAAAAAAAA	73937022	True	NA	NA	False	NA	NA	NA	73944323	74007684	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_73944466_73944583_73944663_73994839_73994962_74004269
transcript_204760.known	chrX	+	3571	4	FSM	ENSG00000225470.8	ENST00000660840.1	3571	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	247.728794361002	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACTAAAAATACAGAAAATT	73937009	True	NA	NA	False	NA	NA	NA	73944310	74007529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_73944466_73944583_73944663_73998767_73998845_74004269
transcript_204765.nic	chrX	+	909	3	ISM	ENSG00000225470.8	ENST00000415215.1	475	4	-25	-274	0	0	intron_retention	FALSE	canonical	3	231	junction_2	172.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATCTTTGAATAACATTT	73937040	True	NA	19	True	AATAAA	-16	NA	73944341	73947704	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_73944466_73944583_73944663_73946998
transcript_204766.known	chrX	+	882	3	FSM	ENSG00000225470.8	ENST00000666493.1	882	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	109	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATCTTTGAATAACATTT	73937016	True	NA	19	True	AATAAA	-16	NA	73944317	73947704	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_73944415_73944583_73944663_73946998
transcript_204767.known	chrX	+	483	2	FSM	ENSG00000225470.8	ENST00000453317.1	483	2	0	0	0	0	multi-exon	FALSE	canonical	3	576	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTTCTTGAAGCATCT	73937044	True	NA	NA	False	NA	NA	NA	73944345	73944946	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_73944466_73944583
transcript_20477.known	chr1	-	5208	26	FSM	ENSG00000069248.12	ENST00000261396.6	5208	26	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_19	40.4009108808205	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTGAATAATTTTTTCT	-229502774	True	NA	-1	True	AGTAAA	-19	NA	229508341	229440258	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_229442041_229444913_229445003_229449125_229449191_229450524_229450606_229452524_229452644_229458160_229458297_229460610_229460770_229463542_229463677_229464623_229464876_229465419_229465520_229466633_229466757_229470579_229470805_229475637_229475733_229477596_229477761_229484053_229484146_229486370_229486529_229487465_229487614_229489954_229490103_229495494_229495566_229495891_229496048_229498135_229498307_229499683_229499819_229500755_229500864_229501998_229502103_229506039_229506159_229508067
transcript_204770.known	chrX	+	1364	1	FSM	ENSG00000225470.8	ENST00000667645.1	1364	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTAACGTGACAGTTGAAG	73937031	True	NA	NA	False	AATACA	-44	NA	73944332	73945696	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_73944300_73945700
transcript_204771.known	chrX	+	853	4	FSM	ENSG00000225470.8	ENST00000660087.1	853	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	236.6812202098	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCTGTATATCTATATGT	73937039	True	NA	7	True	AATAAA	-19	NA	73944340	74004542	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_73944466_73944583_73944663_73946998_73947375_74004269
transcript_204772.known	chrX	+	606	4	FSM	ENSG00000225470.8	ENST00000654374.1	606	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	42.4604391038163	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTATATGTGAAATTGAA	73937039	True	NA	16	True	AATAAA	-28	NA	73944340	74004551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_73944466_73994839_73994962_73998767_73998845_74004269
transcript_204776.known	chrX	+	4128	6	FSM	ENSG00000147100.11	ENST00000587091.6	4128	6	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_2	37.9104207309811	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGGGTATGTATGTTGC	74417251	True	NA	36	True	AATAAA	-16	NA	74421492	74533916	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_74422068_74520989_74521135_74524358_74524810_74525749_74525894_74529212_74529442_74531332
transcript_204779.nnic	chrX	+	3920	6	NNC	ENSG00000147100.11	novel	4128	6	NA	NA	-74	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_2	154.856578807618	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGGGTATGTATGTTGC	74417177	True	NA	36	True	AATAAA	-16	NA	74421418	74533916	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_74422068_74520989_74521135_74524640_74524810_74525749_74525894_74529212_74529442_74531332
transcript_204780.nic	chrX	+	2708	5	NIC	ENSG00000147100.11	novel	4128	6	NA	NA	-50	67	combination_of_known_junctions	FALSE	canonical	3	108	junction_4	125.480078100071	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATTCCTAGCCTGGATCC	74417201	True	NA	NA	False	AAGAAA	-8	NA	74421442	74532675	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_74422068_74520989_74521135_74524358_74524810_74525749_74525894_74531332
transcript_204781.nic	chrX	+	3950	5	NIC	ENSG00000147100.11	novel	4128	6	NA	NA	-54	-3	combination_of_known_junctions	FALSE	canonical	3	108	junction_4	125.480078100071	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTGGGTATGTATGT	74417197	True	NA	33	True	AATAAA	-13	NA	74421438	74533913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_74422068_74520989_74521135_74524358_74524810_74525749_74525894_74531332
transcript_204789.known	chrX	-	3478	5	FSM	ENSG00000131263.13	ENST00000349225.2	3478	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	37.9143772202578	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTTTTGAGATTTGTCA	NA	False	NA	NA	False	NA	NA	NA	74614617	74590117	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_74593062_74594305_74594390_74595808_74596001_74612581_74612644_74614421
transcript_204791.known	chrX	-	10565	4	FSM	ENSG00000131263.13	ENST00000332687.11	10565	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_3	25.4863798048204	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTATGTACCGAGCAAATG	NA	False	NA	NA	False	TATAAA	-15	NA	74614624	74582975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_74593062_74594305_74594390_74595808_74596001_74614421
transcript_204793.known	chrX	-	2361	17	FSM	ENSG00000131269.19	ENST00000645829.3	2361	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	79.4862163758598	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATACATTCCCATTTTCTA	NA	False	NA	-21	True	ATTAAA	-5	NA	75156282	75053292	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_75053586_75060222_75060331_75062327_75062432_75065069_75065242_75069006_75069137_75069290_75069455_75070364_75070523_75071508_75071684_75073688_75073777_75073867_75073957_75075361_75075631_75076521_75076655_75098941_75099062_75112885_75112973_75114620_75114633_75114753_75114835_75156104
transcript_204794.known	chrX	-	4592	16	FSM	ENSG00000131269.19	ENST00000373394.8	4592	16	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_15	36.9407934703929	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGTTAAAGTCTCAATAG	NA	False	NA	-7	True	AATAAA	-20	NA	75156283	75051047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_75053586_75060222_75060331_75062327_75062432_75065069_75065242_75069006_75069137_75069290_75069455_75070364_75070523_75071508_75071684_75073688_75073777_75073867_75073957_75075361_75075631_75076521_75076655_75098941_75099062_75112885_75112973_75114753_75114832_75156104
transcript_204795.known	chrX	-	4595	16	FSM	ENSG00000131269.19	ENST00000253577.9	4595	16	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_15	41.7846330073097	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGTTAAAGTCTCAATAG	NA	False	NA	-7	True	AATAAA	-20	NA	75156283	75051047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_75053586_75060222_75060331_75062327_75062432_75065069_75065242_75069006_75069137_75069290_75069455_75070364_75070523_75071508_75071684_75073688_75073777_75073867_75073957_75075361_75075631_75076521_75076655_75098941_75099062_75112885_75112973_75114753_75114835_75156104
transcript_204801.known	chrX	-	2377	14	FSM	ENSG00000131269.19	ENST00000669573.1	2377	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	67.9285214300196	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTATAGCCAGATGAATCA	NA	False	NA	NA	False	NA	NA	NA	75156279	75053081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_75053586_75060222_75060331_75062327_75062432_75065069_75065242_75069006_75069137_75069290_75069455_75070364_75070523_75071508_75071684_75075361_75075631_75076521_75076655_75098941_75099062_75112885_75112973_75114753_75114832_75156104
transcript_204807.known	chrX	+	1135	8	FSM	ENSG00000094841.14	ENST00000462237.5	1135	8	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	44.4393647890825	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAAAATAATTATCTTATG	75273076	True	NA	NA	False	NA	NA	NA	75274115	75303519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_75274641_75293471_75293515_75294562_75294621_75296341_75296412_75297490_75297554_75299734_75299897_75300866_75300966_75303404
transcript_204812.known	chrX	+	2474	7	FSM	ENSG00000094841.14	ENST00000373383.9	2474	7	0	0	0	0	multi-exon	TRUE	canonical	3	93	junction_1	21.7670750344541	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCATGGCAAATGTTGCT	75273045	True	NA	NA	False	AATAAA	-32	NA	75274084	75304885	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_75274641_75293471_75293515_75296341_75296412_75297490_75297554_75299734_75299897_75300866_75300966_75303404
transcript_204814.known	chrX	+	2234	7	FSM	ENSG00000094841.14	ENST00000373379.5	2234	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	48.8651773306468	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTAGCTGATTACTTGA	75273050	True	NA	6	True	ATTAAA	-15	NA	75274089	75304600	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_75274641_75293471_75293515_75296341_75296412_75297490_75297554_75299734_75299897_75300866_75301016_75303404
transcript_204816.known	chrX	+	1636	7	FSM	ENSG00000094841.14	ENST00000530743.1	1636	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	44.6081706516742	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTGATATTAAAACATTT	75274717	False	NA	-22	True	NA	NA	NA	75274727	75304572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_75274759_75293471_75293515_75296341_75296412_75297490_75297554_75299734_75299897_75300866_75300966_75303404
transcript_204819.known	chrX	-	5578	12	FSM	ENSG00000102383.14	ENST00000373367.8	5578	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	11.3494456849386	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGGTTTTTTTTCCTAA	NA	False	NA	NA	False	ATTAAA	-16	NA	75523037	75368426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_75372946_75379119_75379199_75417086_75417191_75421863_75421991_75424651_75424785_75429077_75429199_75429947_75429981_75431450_75431521_75450801_75450923_75478890_75478986_75505820_75505848_75522888
transcript_204825.known	chrX	-	2268	1	FSM	ENSG00000186675.7	ENST00000373359.4	2268	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTATGCTTGTGCATTCAT	NA	False	NA	NA	False	AATAAA	-17	NA	75785254	75782986	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_75783000_75785300
transcript_204826.known	chrX	+	1185	6	FSM	ENSG00000102390.11	ENST00000373358.8	1185	6	0	0	0	0	multi-exon	FALSE	canonical	3	605	junction_1	26.1640975384209	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGTTTCCTGTAGTGAA	76162890	True	NA	137	True	NA	NA	NA	76173061	76178314	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_76173169_76173584_76173651_76174889_76174950_76175472_76175614_76176880_76176993_76177615
transcript_204832.known	chrX	+	977	5	FSM	ENSG00000102390.11	ENST00000373357.3	977	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	258.396013901144	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATCTATATCTGTGACTG	76162868	True	NA	19	True	AATAAA	-16	NA	76173039	76178196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_76173169_76173584_76173651_76174889_76174950_76175472_76175614_76177615
transcript_204837.known	chrX	+	3633	1	FSM	ENSG00000198934.5	ENST00000361470.4	3633	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAATGCTAATACACTGAC	76427309	True	NA	NA	False	AATAAA	-17	NA	76427709	76431342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_76427700_76431300
transcript_204838.known	chrX	+	1666	3	FSM	ENSG00000196468.8	ENST00000439435.3	1666	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	3	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGTCTAATTCTATTG	77447157	True	NA	26	True	AATAAA	-20	NA	77447388	77457278	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_77447949_77454156_77454261_77456276
transcript_20484.nic	chr1	-	3096	21	ISM	ENSG00000069248.12	ENST00000261396.6	5208	26	-30	17908	-30	-9395	5prime_fragment	FALSE	canonical	3	270	junction_14	24.85734297949	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAGGTGAAAGAATTTGA	-229502804	True	NA	NA	False	AAGAAA	-4	NA	229508371	229458166	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_229458297_229460610_229460770_229463542_229463677_229464623_229464876_229465419_229465520_229466633_229466757_229470579_229470805_229475637_229475733_229477596_229477761_229484053_229484146_229486370_229486529_229487465_229487614_229489954_229490103_229495494_229495566_229495891_229496048_229498135_229498307_229499683_229499819_229500755_229500864_229501998_229502103_229506039_229506159_229508067
transcript_204842.known	chrX	-	3071	10	FSM	ENSG00000085224.23	ENST00000624032.3	3071	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	22.3463201599583	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGCAAAAAGGGAACTGAAG	NA	False	NA	98	True	GATAAA	-6	NA	77786208	77682304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_77683452_77683538_77684594_77684938_77685007_77688817_77688928_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
transcript_204854.nic	chrX	-	3431	9	ISM	ENSG00000085224.23	ENST00000373344.11	11165	35	-71	177231	-54	194	5prime_fragment	FALSE	canonical	3	31	junction_3	17.1755640373177	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGAGATAAAACTTCTAAA	NA	False	NA	NA	False	AGTAAA	-5	NA	77786287	77682110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_77684594_77684938_77685007_77688817_77688928_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
transcript_204856.nic	chrX	-	3246	9	ISM	ENSG00000085224.23	ENST00000373344.11	11165	35	-71	177416	-54	9	5prime_fragment	FALSE	canonical	3	31	junction_3	17.1755640373177	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGGAACTGAAGAAAAAAAGA	NA	False	NA	NA	False	GATAAA	-15	NA	77786287	77682295	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_77684594_77684938_77685007_77688817_77688928_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
transcript_20486.nic	chr1	-	2356	17	ISM	ENSG00000069248.12	ENST00000261396.6	5208	26	-30	25226	-30	-16713	5prime_fragment	FALSE	canonical	3	270	junction_10	26.2675536546516	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAACTCTTTGTATAGAA	-229502804	True	NA	NA	False	NA	NA	NA	229508371	229465484	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_229465520_229466633_229466757_229470579_229470805_229475637_229475733_229477596_229477761_229484053_229484146_229486370_229486529_229487465_229487614_229489954_229490103_229495494_229495566_229495891_229496048_229498135_229498307_229499683_229499819_229500755_229500864_229501998_229502103_229506039_229506159_229508067
transcript_204861.nic	chrX	-	2793	9	ISM	ENSG00000085224.23	ENST00000373344.11	11165	35	-4	177802	0	-377	5prime_fragment	FALSE	canonical	3	31	junction_3	17.1755640373177	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATGGATAATCAAGGGCA	NA	False	NA	2	True	AATACA	-43	NA	77786220	77682681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_77684594_77684938_77685007_77688817_77688928_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
transcript_204864.nic	chrX	-	2804	9	ISM	ENSG00000085224.23	ENST00000373344.11	11165	35	-71	177858	-54	-433	5prime_fragment	FALSE	canonical	3	31	junction_3	17.1755640373177	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATTCCAAATACAAAAGAT	NA	False	NA	-54	True	AGTAAA	-29	NA	77786287	77682737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_77684594_77684938_77685007_77688817_77688928_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
transcript_204869.nic	chrX	-	2640	9	ISM	ENSG00000085224.23	ENST00000373344.11	11165	35	-4	177955	0	-530	5prime_fragment	FALSE	canonical	3	31	junction_3	17.1755640373177	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGACAAACCCAGTCTGAGTC	NA	False	NA	NA	False	AAAAAG	-40	NA	77786220	77682834	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_77684594_77684938_77685007_77688817_77688928_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
transcript_204870.nic	chrX	-	2621	9	ISM	ENSG00000085224.23	ENST00000373344.11	11165	35	-71	178041	-54	586	5prime_fragment	FALSE	canonical	3	31	junction_3	17.1755640373177	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAACGAAAAAGTTCTACA	NA	False	NA	NA	False	GATAAA	-8	NA	77786287	77682920	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_77684594_77684938_77685007_77688817_77688928_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
transcript_204874.nic	chrX	-	1506	9	ISM	ENSG00000085224.23	ENST00000624032.3	3071	10	-16	1668	1	-466	5prime_fragment	FALSE	canonical	3	31	junction_3	17.1755640373177	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACCAAAGAGCATAAAGTCA	NA	False	NA	NA	False	NA	NA	NA	77786224	77683972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_77684594_77684938_77685007_77688817_77688928_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
transcript_204876.nic	chrX	-	1183	9	ISM	ENSG00000085224.23	ENST00000624032.3	3071	10	-79	2054	-54	119	5prime_fragment	FALSE	canonical	3	31	junction_3	17.1755640373177	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTGACAGTGAAAAGAGTAA	NA	False	NA	NA	False	GATAAA	-2	NA	77786287	77684358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_77684594_77684938_77685007_77688817_77688928_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
transcript_204886.nic	chrX	-	2676	8	NIC	ENSG00000085224.23	novel	4272	14	NA	NA	0	-377	intron_retention	FALSE	canonical	3	8	junction_3	24.5805630861592	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATGGATAATCAAGGGCA	NA	False	NA	2	True	AATACA	-43	NA	77786220	77682681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_77684594_77684938_77685007_77688817_77688925_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
transcript_204889.nic	chrX	-	2690	8	ISM	ENSG00000085224.23	ENST00000395603.7	10218	34	-71	177025	-54	-433	5prime_fragment	FALSE	canonical	2	2	junction_3	26.4057816798225	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATTCCAAATACAAAAGAT	NA	False	NA	-54	True	AGTAAA	-29	NA	77786287	77682737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_77684594_77684938_77685007_77688817_77688928_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
transcript_20489.known	chr1	-	779	6	FSM	ENSG00000069248.12	ENST00000366678.4	779	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	122.243363828062	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTTTGAATGGCTGAAGC	-229502759	True	NA	NA	False	AAGAAA	-42	NA	229508326	229499166	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_229499221_229499683_229499819_229500755_229500864_229501998_229502103_229506039_229506159_229508067
transcript_2049.known	chr1	-	2664	9	FSM	ENSG00000171680.23	ENST00000487949.4	2664	9	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	17.6050418914583	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGAAGAGTCCTTTGCTT	-6470810	True	NA	-12	True	TATAAA	-18	NA	6471583	6467121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6467573_6467824_6468587_6469041_6469242_6469334_6469451_6469543_6469677_6470235_6470356_6470505_6470644_6470734_6470885_6470989
transcript_204900.known	chrX	-	1860	8	FSM	ENSG00000085224.23	ENST00000623321.3	1860	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_7	25.6093095317675	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAATTATATGTTAAACT	NA	False	NA	NA	False	ATTAAA	-25	NA	77786225	77683506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_77684594_77684938_77685007_77688817_77688928_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77785981
transcript_204901.nic	chrX	-	1386	8	ISM	ENSG00000085224.23	ENST00000395603.7	10218	34	-2	178260	-2	-466	5prime_fragment	FALSE	canonical	2	2	junction_3	26.4057816798225	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACCAAAGAGCATAAAGTCA	NA	False	NA	NA	False	NA	NA	NA	77786218	77683972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_77684594_77684938_77685007_77688817_77688928_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
transcript_204910.known	chrX	-	11165	35	FSM	ENSG00000085224.23	ENST00000373344.11	11165	35	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_29	69.6999997517785	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACTGTGTCAAAGCTCAA	NA	False	NA	NA	False	AATAAA	-18	NA	77786216	77504879	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_77508630_77520787_77520917_77521402_77521499_77522262_77522389_77523251_77523402_77557450_77557646_77558668_77558847_77574249_77574359_77589833_77589941_77593695_77593850_77599410_77599581_77599731_77599821_77600433_77600565_77616612_77616731_77618805_77618982_77620394_77620533_77633206_77633385_77633565_77633713_77634593_77634704_77635914_77636057_77652113_77652354_77654097_77654201_77656559_77656654_77663381_77663559_77664644_77664779_77676225_77676299_77681519_77684594_77684938_77685007_77688817_77688928_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
transcript_204912.nnic	chrX	-	3325	11	NNC	ENSG00000102158.22	novel	4047	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	54.2907911159895	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGTTTTTGATTACCA	NA	False	NA	-16	True	AATAAA	-16	NA	77895448	77826363	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_77828025_77828601_77829236_77830804_77830896_77841245_77841321_77853900_77853965_77855500_77855591_77856732_77856874_77857356_77857498_77870807_77870926_77875427_77875598_77895308
transcript_204913.nnic	chrX	-	3441	11	NNC	ENSG00000102158.22	novel	4047	10	NA	NA	-56	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	54.2907911159895	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGTTTTTGATTACCA	NA	False	NA	-16	True	AATAAA	-16	NA	77895504	77826363	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_77828034_77828550_77829236_77830804_77830896_77841245_77841321_77853900_77853965_77855500_77855591_77856732_77856874_77857356_77857498_77870807_77870926_77875427_77875598_77895308
transcript_204914.nnic	chrX	-	3369	11	NNC	ENSG00000102158.22	novel	3407	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	54.2907911159895	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGTTTTTGATTACCA	NA	False	NA	-16	True	AATAAA	-16	NA	77895435	77826363	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_77828039_77828558_77829236_77830804_77830896_77841245_77841321_77853900_77853965_77855500_77855591_77856732_77856874_77857356_77857498_77870807_77870926_77875427_77875598_77895308
transcript_204915.nnic	chrX	-	2313	11	NNC	ENSG00000102158.22	novel	3407	11	NA	NA	-56	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	54.2907911159895	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTCCCTTAGAATGGGAA	NA	False	NA	NA	False	AAAAAG	-13	NA	77895504	77827431	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_77828025_77828601_77829236_77830804_77830896_77841245_77841321_77853900_77853965_77855500_77855591_77856732_77856874_77857356_77857498_77870807_77870926_77875427_77875598_77895308
transcript_204916.nnic	chrX	-	2373	11	NNC	ENSG00000102158.22	novel	3407	11	NA	NA	-56	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	54.2907911159895	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTCCCTTAGAATGGGAA	NA	False	NA	NA	False	AAAAAG	-13	NA	77895504	77827431	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_77828034_77828550_77829236_77830804_77830896_77841245_77841321_77853900_77853965_77855500_77855591_77856732_77856874_77857356_77857498_77870807_77870926_77875427_77875598_77895308
transcript_204917.nnic	chrX	-	2370	11	NNC	ENSG00000102158.22	novel	3407	11	NA	NA	-56	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	54.2907911159895	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTCCCTTAGAATGGGAA	NA	False	NA	NA	False	AAAAAG	-13	NA	77895504	77827431	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_77828039_77828558_77829236_77830804_77830896_77841245_77841321_77853900_77853965_77855500_77855591_77856732_77856874_77857356_77857498_77870807_77870926_77875427_77875598_77895308
transcript_204922.known	chrX	-	4047	10	FSM	ENSG00000102158.22	ENST00000358075.11	4047	10	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_7	12.5619452767397	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGTTTTTGATTACCA	NA	False	NA	-16	True	AATAAA	-16	NA	77895593	77826363	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_77829236_77830804_77830896_77841245_77841321_77853900_77853965_77855500_77855591_77856732_77856874_77857356_77857498_77870807_77870926_77875427_77875598_77895308
transcript_20493.known	chr1	-	3869	13	FSM	ENSG00000135776.5	ENST00000344517.5	3869	13	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_12	20.2168796361412	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCTGTCACTTTTTT	-229558121	True	NA	0	True	ATTAAA	-18	NA	229558707	229516581	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_229518411_229518840_229518876_229521591_229521636_229525935_229526117_229527228_229527309_229530198_229530409_229531635_229531732_229539455_229539592_229540605_229540753_229542236_229542372_229547498_229547702_229549233_229549435_229558135
transcript_204933.known	chrX	+	605	4	FSM	ENSG00000131174.7	ENST00000373335.4	605	4	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	2828.84550459881	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTAGGTTTTGTTTCTTTG	77874842	True	NA	25	True	AATAAA	-19	NA	77899439	77905385	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_77899594_77901743_77901868_77902642_77902768_77905183
transcript_204934.known	chrX	+	8492	23	FSM	ENSG00000165240.22	ENST00000341514.11	8492	23	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_13	3.7041968603417	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTCTGTCTCTTTTGT	77910200	True	NA	2	True	NA	NA	NA	77910692	78050395	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_77910836_77971620_77971762_77988241_77988732_77989232_77989959_77998477_77998685_78003072_78003237_78009101_78009264_78011175_78011253_78011448_78011675_78012878_78013113_78014661_78014754_78015753_78015882_78020243_78020399_78020944_78021080_78029249_78029445_78031399_78031583_78033604_78033822_78038835_78038983_78040590_78040734_78042584_78042789_78043316_78043435_78045469_78045573_78046293
transcript_204935.known	chrX	+	8289	22	FSM	ENSG00000165240.22	ENST00000686543.1	4716	22	-83	-3490	-34	-6	multi-exon	TRUE	canonical	0	0	junction_9	4.03105855906063	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATATTTTTGTCTGTCTC	77910163	True	NA	-4	True	NA	NA	NA	77910655	78050389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_77910836_77971620_77971762_77988241_77988732_77989232_77989959_77998477_77998685_78003072_78003237_78009101_78009264_78011175_78011253_78011448_78011675_78014661_78014754_78015753_78015882_78020243_78020399_78020944_78021080_78029249_78029445_78031399_78031583_78033604_78033822_78038835_78038983_78040590_78040734_78042584_78042789_78043316_78043435_78045469_78045573_78046293
transcript_20494.known	chr1	-	3112	5	FSM	ENSG00000135801.10	ENST00000258281.6	3112	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	20.5836707124847	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTGTTGGCAT	-229624107	True	NA	31	True	ATTAAA	-15	NA	229626047	229593120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_229595095_229602194_229602920_229610105_229610211_229614340_229614486_229625884
transcript_204940.known	chrX	+	4812	11	FSM	ENSG00000102144.15	ENST00000373316.5	4812	11	0	0	0	0	multi-exon	FALSE	canonical	3	6118	junction_7	297.033331462986	1916	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGCTGTTCTGTAGTTG	78054768	True	NA	4	True	ATTAAA	-16	NA	78104247	78129295	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_78104406_78109866_78109918_78113743_78113900_78114015_78114161_78117311_78117416_78118050_78118171_78122834_78122950_78123194_78123375_78124873_78125052_78125326_78125426_78125789
transcript_204962.known	chrX	-	2657	7	FSM	ENSG00000187325.5	ENST00000341864.6	2657	7	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	39.8138027433815	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTTTTCATTTTTTAG	NA	False	NA	-30	True	AATAAA	-13	NA	78139650	78129747	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_78131774_78133337_78133449_78136914_78136991_78137748_78137884_78137961_78138099_78138842_78138925_78139560
transcript_204966.known	chrX	+	553	5	FSM	ENSG00000147145.14	ENST00000614823.5	4454	5	14	3887	3	-179	multi-exon	TRUE	canonical	2	7	junction_1	1.29903810567666	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAACCCCTGCAGCCAGC	78746919	True	NA	NA	False	NA	NA	NA	78747733	78754827	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_78748035_78750173_78750224_78750729_78750793_78751209_78751312_78754790
transcript_204971.known	chrX	+	2611	2	FSM	ENSG00000147145.14	ENST00000435339.3	2611	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACATAAACTAAACCAAACC	78746913	True	NA	NA	False	AATAAA	-13	NA	78747727	78757094	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_78748035_78754790
transcript_204973.known	chrX	-	1616	6	FSM	ENSG00000078596.11	ENST00000373298.7	1616	6	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_5	21.7678662252413	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGTTTCTTTTATTTCA	NA	False	NA	-4	True	AATAAA	-16	NA	79367334	79360383	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_79361178_79361328_79361480_79362580_79362692_79362941_79363140_79363422_79363555_79367104
transcript_204975.known	chrX	-	1698	5	FSM	ENSG00000078596.11	ENST00000434584.2	1698	5	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_4	130.352167224024	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACCACTGTTTCTTTTAT	NA	False	NA	-8	True	AATAAA	-12	NA	79367552	79360387	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_79361178_79361328_79361480_79362580_79362692_79362941_79363140_79367104
transcript_204977.known	chrX	-	12921	41	FSM	ENSG00000165288.11	ENST00000373275.5	12921	41	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_31	14.9346702340561	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGGTAGTTCTGAATTA	NA	False	NA	-19	True	AATGAA	-1	NA	80809877	80669502	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_80677364_80681340_80681500_80681996_80682095_80682464_80682629_80684009_80684163_80685461_80685537_80686862_80687004_80688068_80688126_80689767_80689847_80689966_80690093_80691052_80691174_80691822_80691979_80692088_80692151_80692939_80693052_80695907_80695991_80696738_80696864_80699956_80700065_80703479_80703594_80704677_80704847_80707426_80707504_80709427_80709578_80716156_80716251_80717572_80717760_80719488_80719657_80722561_80722788_80723747_80723877_80724932_80725068_80728751_80728906_80729915_80730021_80733455_80733497_80734117_80734219_80735126_80735198_80735987_80736089_80744031_80744254_80745568_80745730_80791853_80791953_80793621_80793773_80808538_80808599_80809012_80809043_80809245_80809305_80809440
transcript_204978.known	chrX	-	578	6	FSM	ENSG00000198157.11	ENST00000430960.5	578	6	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_4	20.3115730557729	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGATGAAAAAGGGGAAGA	NA	False	NA	-76	True	NA	NA	NA	81121683	81115053	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_81115231_81116203_81116342_81118431_81118486_81118729_81118760_81119787_81119818_81121534
transcript_20498.known	chr1	+	5601	10	FSM	ENSG00000135763.10	ENST00000258243.7	5601	10	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	21.2602916254693	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTTTCCTGTGTAATAT	229623614	True	NA	35	True	CATAAA	-19	NA	229626246	229660200	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_229626357_229627620_229627760_229632268_229632446_229634916_229638248_229643532_229643694_229645858_229645970_229647509_229647753_229651234_229651323_229654248_229654389_229659099
transcript_204984.known	chrX	-	572	5	FSM	ENSG00000198157.11	ENST00000373250.7	572	5	0	0	0	0	multi-exon	TRUE	canonical	3	44	junction_4	146.823874080478	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAAAGAAGATGGAAAAAA	NA	False	NA	-7	True	GATAAA	-31	NA	81121638	81114984	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_81115231_81116203_81116342_81118431_81118486_81118729_81118760_81121534
transcript_204987.nic	chrX	-	473	5	ISM	ENSG00000198157.11	ENST00000430960.5	578	6	-72	1150	-67	0	5prime_fragment	FALSE	canonical	3	338	junction_3	22.6867251933813	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTTCTAATGTTAACAG	NA	False	NA	NA	False	AATGAA	-34	NA	81121755	81116203	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_81116342_81118431_81118486_81118729_81118760_81119787_81119818_81121534
transcript_204988.known	chrX	-	547	6	FSM	ENSG00000198157.11	ENST00000491275.1	547	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	149.368001928124	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAGAAAGAAGATGAAGAAGA	NA	False	NA	59	True	AGTAAA	-17	NA	81121688	81115110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_81115231_81116203_81116342_81118431_81118486_81118729_81118781_81119787_81119818_81121534
transcript_204989.known	chrX	+	928	5	FSM	ENSG00000131171.13	ENST00000481106.5	928	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	190.58200334764	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGTCTCTCATTCCTA	81198233	True	NA	6	True	ATTAAA	-16	NA	81202127	81297597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_81202246_81202436_81202577_81276983_81277170_81278330_81278412_81297194
transcript_204992.known	chrX	+	1764	4	FSM	ENSG00000131171.13	ENST00000373212.6	1764	4	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_1	7.1336448530109	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGTGTTCTTGGAGTTT	81198207	True	NA	12	True	AATAAA	-23	NA	81202101	81298547	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_81202246_81276983_81277170_81278330_81278412_81297194
transcript_204997.known	chrX	+	3838	1	FSM	ENSG00000196767.9	ENST00000644024.2	3838	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTTCTCCTGGTCTTA	83508042	True	NA	NA	False	AATAAA	-20	NA	83508289	83512127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_83508300_83512100
transcript_204999.known	chrX	-	8465	22	FSM	ENSG00000072133.11	ENST00000262752.5	8465	22	0	0	0	0	multi-exon	TRUE	canonical	3	51	junction_10	9.17207632583725	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTACCGTTGACCTCGCT	NA	False	NA	-11	True	AATAAA	-21	NA	84188199	84058349	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_84064403_84064970_84065112_84096193_84096312_84097771_84097849_84102036_84102199_84104498_84104658_84105786_84105877_84106364_84106488_84106909_84107041_84107622_84107726_84116228_84116288_84117059_84117149_84117383_84117455_84119884_84120028_84134781_84134820_84135103_84135211_84145477_84145558_84146977_84147059_84148041_84148124_84156074_84156192_84164327_84164388_84187818
transcript_205004.known	chrX	-	6305	11	FSM	ENSG00000165259.14	ENST00000373177.3	6305	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	11.3859562619922	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACATCTATTTCTTTATT	NA	False	NA	NA	False	AATAAA	-15	NA	84502453	84317877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_84322015_84326177_84326301_84333758_84333843_84336800_84336881_84344249_84344458_84361465_84361613_84440531_84440586_84468471_84469576_84475250_84475398_84488023_84488133_84502341
transcript_205006.known	chrX	-	6200	10	FSM	ENSG00000165259.14	ENST00000297977.9	6200	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	5.76280110217331	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTATTTCTTTATTTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	84502453	84317873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_84322015_84326177_84326301_84333758_84333843_84336800_84336881_84344249_84344458_84361465_84361613_84440531_84440586_84468471_84469576_84475250_84475398_84502341
transcript_205007.known	chrX	-	6158	10	FSM	ENSG00000165259.14	ENST00000506585.6	6158	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	12.1513094351043	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACATCTATTTCTTTATT	NA	False	NA	NA	False	AATAAA	-15	NA	84502453	84317877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_84322015_84326177_84326301_84333758_84333843_84336800_84336881_84344249_84344458_84361465_84361613_84440531_84440586_84468471_84469576_84488023_84488133_84502341
transcript_205015.known	chrX	-	475	3	FSM	ENSG00000165259.14	ENST00000465509.3	475	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	6.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATACTTCTCTTTGGTGAC	NA	False	NA	NA	False	AATAAA	-17	NA	84502453	84500024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_84500305_84501428_84501512_84502341
transcript_205018.known	chrX	+	6480	9	FSM	ENSG00000155008.16	ENST00000373173.7	6480	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	7.46240577829965	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTTTTTTGTATATTA	85001549	True	NA	13	True	AATAAA	-18	NA	85003876	85093315	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_85003928_85046445_85046551_85051388_85051509_85054343_85054399_85055826_85055926_85067126_85067219_85073997_85074112_85074273_85074392_85087589
transcript_205024.known	chrX	+	4559	11	FSM	ENSG00000147180.17	ENST00000674551.1	4559	11	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	48.5408075746583	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATGGTTTTATAAGTTT	85242355	True	NA	19	True	AATAAA	-15	NA	85243990	85273357	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_85244192_85245902_85246023_85246929_85247189_85247546_85247652_85255258_85255802_85264274_85264431_85265117_85265256_85267277_85267416_85268293_85268342_85270002_85270147_85270650
transcript_205025.known	chrX	+	2887	10	FSM	ENSG00000147180.17	ENST00000276123.7	2887	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	41.6558504479648	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATACTAAACCATGACTTTA	85242448	True	NA	NA	False	NA	NA	NA	85244083	85271921	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_85244192_85245902_85246023_85246929_85247184_85247546_85247652_85255258_85255802_85264274_85264431_85265117_85265256_85268293_85268342_85270002_85270147_85270650
transcript_205029.known	chrX	+	4124	9	FSM	ENSG00000147180.17	ENST00000373165.7	4124	9	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	25.228641957109	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGTTTTATAAGTTTATT	85242396	True	NA	22	True	AATAAA	-18	NA	85244031	85273360	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_85244192_85245902_85246023_85247546_85247652_85255258_85255802_85264274_85264431_85265117_85265256_85268293_85268342_85270002_85270147_85270650
transcript_205043.known	chrX	-	5438	15	FSM	ENSG00000188419.14	ENST00000357749.7	5438	15	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_3	7.45325569185462	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGGTGTCATATTTTGT	NA	False	NA	0	True	AATAAA	-20	NA	86047558	85861179	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_85864822_85873051_85873213_85878964_85879064_85894187_85894285_85900645_85900710_85901083_85901189_85911260_85911339_85956152_85956379_85957854_85957976_85958860_85958978_85963664_85964053_85978766_85978892_85981736_85981810_86027490_86027558_86047483
transcript_205049.known	chrX	+	5765	11	FSM	ENSG00000102271.14	ENST00000373119.9	5765	11	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_6	11.9753914341035	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTCTTGACAATGCTTG	87516214	True	NA	NA	False	AATAAA	-15	NA	87517801	87670050	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_87518316_87613876_87614045_87614433_87614571_87617931_87618129_87622210_87622424_87625609_87625797_87632209_87632435_87633748_87633912_87635562_87635776_87664763_87664936_87666474
transcript_205051.nnic	chrX	+	2324	6	NNC	ENSG00000102271.14	novel	3703	12	NA	NA	109274	-1663	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.2912858453553	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATAGTGTGGCTTTAGAAT	NA	False	NA	8	True	AATAAA	-16	NA	87627087	87667933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_87627180_87632209_87632435_87633748_87633912_87635562_87635776_87664763_87664936_87666474
transcript_205052.known	chrX	+	3206	2	FSM	ENSG00000174740.8	ENST00000312600.4	3206	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAGTGACTGCATAGTAT	91434672	True	NA	NA	False	AATAAA	-19	NA	91434838	91438584	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_91434895_91435434
transcript_205057.nic	chrX	+	4240	7	NIC	ENSG00000102290.23	novel	9022	11	NA	NA	0	-582	combination_of_known_junctions	FALSE	canonical	3	68	junction_2	3.5939764421413	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAACACTCTGGTTCAGT	91774802	True	NA	NA	False	AAAACA	-4	NA	91779374	91883425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_91779685_91809465_91809635_91810472_91810579_91811236_91811296_91835460_91836045_91876780_91879274_91882906
transcript_205058.nic	chrX	+	4470	7	NIC	ENSG00000102290.23	novel	9022	11	NA	NA	0	-352	combination_of_known_junctions	FALSE	canonical	3	68	junction_2	3.5939764421413	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCCTGGCGTGGTGGCGG	91774802	True	NA	NA	False	AATACA	-6	NA	91779374	91883655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_91779685_91809465_91809635_91810472_91810579_91811236_91811296_91835460_91836045_91876780_91879274_91882906
transcript_205059.nic	chrX	+	5035	7	NIC	ENSG00000102290.23	novel	9022	11	NA	NA	0	213	combination_of_known_junctions	FALSE	canonical	3	68	junction_2	3.5939764421413	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATTTTTGTTGTAATAAT	91774802	True	NA	NA	False	AAAAAG	-8	NA	91779374	91884220	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_91779685_91809465_91809635_91810472_91810579_91811236_91811296_91835460_91836045_91876780_91879274_91882906
transcript_205062.nic	chrX	+	3477	6	ISM	ENSG00000102290.23	ENST00000682573.1	9022	11	-174	744375	-60	-1143	5prime_fragment	FALSE	canonical	3	68	junction_2	3.74165738677394	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGAAGCATTCCCCTA	NA	False	NA	NA	False	AAAAAG	-6	NA	91779200	91878855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_91779685_91809465_91809635_91810472_91810579_91811236_91811296_91835460_91836045_91876780
transcript_205063.known	chrX	+	4767	6	FSM	ENSG00000102290.23	ENST00000298274.12	4767	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	20.9723627662693	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGAAACCCCGTCTCTTCT	NA	False	NA	NA	False	NA	NA	NA	91779260	91884007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_91779685_91810472_91810579_91811236_91811296_91835460_91836045_91876780_91879274_91882906
transcript_205065.nnic	chrX	+	3244	5	NIC	ENSG00000102290.23	novel	9022	11	NA	NA	0	-1143	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	28.613807855649	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGAAGCATTCCCCTA	91774802	True	NA	NA	False	AAAAAG	-6	NA	91779374	91878855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_91779685_91809465_91809635_91810472_91810579_91835460_91836045_91876780
transcript_205070.known	chrX	-	2649	1	FSM	ENSG00000186310.10	ENST00000373079.4	2649	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGCCTTTTCTCCTGACT	NA	False	NA	NA	False	AATAAA	-31	NA	93673578	93670929	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_93670900_93673600
transcript_205072.known	chrX	+	3376	28	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	175	-70	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_24	139.35289405295	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGATTGGGTGATGGTACA	96684999	False	NA	-55	True	CATAAA	-22	NA	96685016	97469765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_96685191_96735757_96735791_96738585_96738763_96758153_96758259_96763099_96763121_96881578_96881719_96912327_96912403_96912482_96912553_96916437_96916575_96918508_96918618_96930732_96930844_96937232_96937352_96939265_96939383_96942017_96942137_96945526_96945592_96948934_96949040_96957827_96958149_96965092_96965208_97072940_97073043_97075166_97075262_97099693_97099796_97114725_97114966_97141664_97141795_97247714_97247842_97348117_97348281_97383908_97384045_97429649_97429746_97469693
transcript_20508.known	chr1	+	4423	16	FSM	ENSG00000143641.10	ENST00000366672.5	4423	16	0	0	0	0	multi-exon	FALSE	canonical	3	471	junction_8	29.2980090336073	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCGCTCTTTGCTGGCCAG	230063895	True	NA	30	True	AATAAA	-19	NA	230067237	230282122	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_230067407_230178217_230178312_230203136_230203291_230236013_230236113_230236352_230236421_230236659_230236726_230243305_230243428_230246062_230246151_230249183_230249272_230250456_230250561_230255217_230255345_230262572_230262666_230262921_230263006_230265240_230265368_230274444_230274565_230279302
transcript_205082.nic	chrX	+	959	7	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	-48	-557422	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	6.3879226322456	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACTGAAATTAAAATCACCA	96683042	True	NA	NA	False	AATAAA	-1	NA	96684793	96912413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_96685191_96735757_96735791_96738585_96738763_96758153_96758259_96763099_96763121_96881578_96881719_96912327
transcript_205084.nnic	chrX	+	734	6	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625765	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	234.222629137323	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCATTTTGTCTGGTGC	97302625	True	NA	15	True	AGTAAA	-20	NA	97310606	97469835	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_97310659_97326577_97326723_97348117_97348281_97383908_97384045_97429649_97429746_97469693
transcript_205085.nnic	chrX	+	787	6	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625748	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	226.29273077145	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCATTTTGTCTGGTGC	97302608	True	NA	15	True	AGTAAA	-20	NA	97310589	97469835	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_97310659_97346805_97346950_97348080_97348281_97383908_97384045_97429649_97429746_97469693
transcript_205091.nnic	chrX	+	676	5	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625715	0	at_least_one_novel_splicesite	FALSE	canonical	3	243	junction_1	117.086506481319	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCATTTTGTCTGGTGC	97302575	True	NA	15	True	AGTAAA	-20	NA	97310556	97469835	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_97310659_97348080_97348281_97383908_97384045_97429649_97429746_97469693
transcript_205092.nnic	chrX	+	983	5	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625715	-5296	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_4	169.968379412172	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAGAAAGAATTATCCAG	97302575	True	NA	NA	False	AAGAAA	-3	NA	97310556	97599701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_97310659_97348080_97348281_97383908_97384045_97429649_97429746_97599252
transcript_205097.nnic	chrX	+	454	4	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625737	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	228.702621080059	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCATTTTGTCTGGTGC	97302597	True	NA	15	True	AGTAAA	-20	NA	97310578	97469835	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_97310659_97383908_97384045_97429649_97429746_97469693
transcript_205107.known	chrX	+	822	2	FSM	ENSG00000281566.3	ENST00000650384.1	822	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAATGATGCT	98572067	True	NA	9	True	NA	NA	NA	98573809	98645226	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_98573933_98644527
transcript_205108.nic	chrX	+	1257	5	ISM	ENSG00000000005.6	ENST00000373031.5	1205	7	8644	0	-44	0	3prime_fragment	FALSE	canonical	3	18	junction_3	5.40832691319598	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTGATTGCTGCTGAAC	NA	False	NA	6	True	AATAAA	-19	NA	100593579	100599885	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_100594036_100594260_100594363_100597503_100597658_100599015_100599183_100599507
transcript_205110.known	chrX	-	3768	8	FSM	ENSG00000000003.15	ENST00000373020.9	3768	8	0	0	0	0	multi-exon	FALSE	canonical	3	996	junction_7	68.3493427405211	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATACCATTTCTGGTTTT	NA	False	NA	-33	True	AATAAA	-17	NA	100636806	100627107	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_100629987_100630758_100630867_100632484_100632569_100633404_100633540_100633930_100634030_100635177_100635253_100635557_100635747_100636607
transcript_205112.nic	chrX	-	2193	8	NIC	ENSG00000000003.15	novel	3768	8	NA	NA	-42	-1916	combination_of_known_junctions	FALSE	canonical	3	45	junction_7	379.144471952638	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCGTGTTTAAATTAACTT	NA	False	NA	-24	True	AATAAA	-20	NA	100636731	100629024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_100629987_100630758_100630867_100632484_100632569_100633404_100633540_100633930_100634030_100635177_100635253_100635557_100635747_100636190
transcript_205117.nic	chrX	-	1086	8	NIC	ENSG00000000003.15	novel	3768	8	NA	NA	-87	2371	combination_of_known_junctions	FALSE	canonical	3	104	junction_7	358.716931207176	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGTTCCTCTTGACTG	NA	False	NA	-14	True	AGTAAA	-16	NA	100636893	100629691	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_100629987_100630758_100630867_100632484_100632569_100633404_100633540_100633930_100634030_100635177_100635253_100635557_100635747_100636792
transcript_205119.known	chrX	-	3796	7	FSM	ENSG00000000003.15	ENST00000612152.4	3796	7	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	499.987472065273	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATACCATTTCTGGTTT	NA	False	NA	-34	True	AATAAA	-16	NA	100637104	100627108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_100629987_100630758_100630867_100633404_100633540_100633930_100634030_100635177_100635253_100635557_100635747_100636792
transcript_205129.known	chrX	+	2074	15	FSM	ENSG00000101811.14	ENST00000415585.6	2074	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	115.907972820101	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGATACACATGACCTT	100815504	True	NA	27	True	AATAAA	-27	NA	100820358	100840932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_100820475_100821526_100821606_100822250_100822421_100823291_100823429_100823885_100824006_100824119_100824258_100826633_100826758_100828039_100828103_100830807_100830868_100831514_100831657_100832733_100832910_100833179_100833473_100837338_100837450_100838238_100838365_100840713
transcript_205136.known	chrX	+	2570	14	FSM	ENSG00000101811.14	ENST00000372972.7	2570	14	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_7	28.094304419729	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATACATTTCATCCTAT	100815536	True	NA	NA	False	AATAAA	-18	NA	100820390	100841520	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_100820475_100821526_100821606_100822250_100822421_100823291_100823429_100823885_100824006_100824119_100824258_100826633_100826758_100828039_100828103_100831514_100831657_100832733_100832910_100833179_100833473_100837338_100837450_100838238_100838365_100840713
transcript_205141.nic	chrX	+	1972	14	NIC	ENSG00000101811.14	novel	2074	15	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_6	82.7630109187152	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGATACACATGACCTT	100815495	True	NA	27	True	AATAAA	-27	NA	100820349	100840932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_100820475_100821526_100821606_100822250_100822421_100823291_100823429_100823885_100824006_100824119_100824258_100826684_100826758_100828039_100828103_100831514_100831657_100832733_100832910_100833179_100833473_100837338_100837450_100838238_100838365_100840713
transcript_205144.nic	chrX	+	2812	13	NIC	ENSG00000101811.14	novel	2074	15	NA	NA	-9	0	intron_retention	FALSE	canonical	3	262	junction_7	28.9668153045669	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGATACACATGACCTT	100815495	True	NA	27	True	AATAAA	-27	NA	100820349	100840932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_100820475_100821526_100821606_100822250_100822421_100823291_100823429_100823885_100824006_100824119_100824258_100826633_100826758_100828039_100828103_100831514_100831657_100832733_100832910_100833179_100833473_100837338_100838365_100840713
transcript_205153.known	chrX	-	2856	3	FSM	ENSG00000182489.9	ENST00000372956.3	2856	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTGTCCTGAGTATTT	NA	False	NA	NA	False	AAGAAA	-19	NA	100928917	100913444	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_100915084_100922792_100923062_100927969
transcript_205163.known	chrX	-	3547	14	FSM	ENSG00000188917.15	ENST00000372936.4	3547	14	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_13	36.9868039797852	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATTTAACATTCTCTAG	NA	False	NA	-11	True	AATAAA	-19	NA	101052111	101009349	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_101010708_101018970_101019071_101019283_101019404_101020486_101020589_101021100_101021316_101021967_101022063_101023469_101023617_101035612_101035684_101036973_101037074_101037916_101038052_101041316_101041372_101042041_101042313_101051250_101051734_101051816
transcript_205164.known	chrX	-	2921	14	FSM	ENSG00000188917.15	ENST00000372935.5	2921	14	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_12	39.3915258360514	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGTAGTTATCCCTAG	NA	False	NA	NA	False	NA	NA	NA	101052070	101009541	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_101010708_101018970_101019071_101019283_101019404_101020486_101020589_101021100_101021316_101021967_101022063_101023469_101023617_101035612_101035684_101036973_101037074_101037916_101038052_101041316_101041372_101042041_101042313_101051643_101051734_101051816
transcript_205176.known	chrX	-	3106	13	FSM	ENSG00000188917.15	ENST00000545398.5	3106	13	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_12	30.727634142576	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAACATTCTCTAGTCCA	NA	False	NA	-7	True	AATAAA	-23	NA	101052116	101009345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_101010708_101018970_101019071_101019283_101019404_101020486_101020589_101021100_101021316_101021967_101022063_101023469_101023617_101035612_101035684_101036973_101037074_101037916_101038052_101041316_101041372_101042041_101042313_101051783
transcript_205185.nnic	chrX	-	2835	12	NIC	ENSG00000188917.15	novel	3106	13	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_11	32.9582756509545	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATTTAACATTCTCTAG	NA	False	NA	-11	True	AATAAA	-19	NA	101052120	101009349	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_101010708_101018970_101019071_101019283_101019404_101020486_101020589_101021100_101021316_101021967_101022063_101023469_101023617_101035612_101035684_101036973_101037074_101037916_101038052_101041316_101041372_101051783
transcript_205197.known	chrX	+	2039	2	FSM	ENSG00000126950.8	ENST00000372930.5	2039	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTCTGGACAAATACTGAA	101078479	True	NA	22	True	AATAAA	-23	NA	101078878	101096367	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_101079123_101094572
transcript_205199.known	chrX	+	3377	23	FSM	ENSG00000102384.14	ENST00000684367.1	3377	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	11.7681633835313	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCAAGGTGGGTGGATC	101095784	True	NA	NA	False	NA	NA	NA	101098187	101163795	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_101098235_101098443_101098540_101099808_101099931_101101057_101101297_101102273_101102412_101109472_101109592_101109890_101109999_101120401_101120451_101120737_101120785_101126708_101126799_101127137_101127267_101127497_101127666_101128715_101128837_101129981_101130074_101132189_101132308_101132391_101132457_101140665_101140761_101145063_101145200_101146152_101146278_101147762_101147812_101147942_101148162_101161527_101161570_101162832
transcript_205204.known	chrX	+	5584	22	FSM	ENSG00000102384.14	ENST00000682095.1	5584	22	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	7.74069553379661	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTTTTTTGTGCCTATT	101095800	True	NA	10	True	AATAAA	-20	NA	101098203	101166126	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_101098249_101098443_101098540_101101057_101101297_101102273_101102412_101109472_101109592_101109890_101109999_101120401_101120451_101120737_101120785_101126708_101126799_101127137_101127267_101127497_101127666_101128715_101128837_101129981_101130074_101132189_101132308_101132391_101132457_101140665_101140761_101145063_101145200_101146152_101146278_101147762_101147812_101147942_101148162_101161527_101161570_101162832
transcript_205209.known	chrX	-	1210	2	FSM	ENSG00000126953.8	ENST00000372902.4	1210	2	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTGATTGAGAAGGCAT	NA	False	NA	-18	True	AATAAA	-18	NA	101348742	101345660	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_101346661_101348532
transcript_205212.known	chrX	-	2951	2	FSM	ENSG00000126953.8	ENST00000644112.2	2951	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTGATTGAGAAGGCAT	NA	False	NA	-18	True	AATAAA	-18	NA	101348742	101345660	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_101348402_101348532
transcript_205217.known	chrX	-	2767	19	FSM	ENSG00000010671.17	ENST00000621635.4	2767	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.04379412378089	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTATCTCTATTAATCA	NA	False	NA	NA	False	AATAAA	-23	NA	101390796	101349446	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_101349957_101353193_101353352_101353869_101353989_101354629_101354695_101356051_101356269_101356783_101356956_101357508_101357584_101358309_101358438_101358616_101358697_101359292_101359348_101360087_101360151_101360567_101360756_101362172_101362241_101362560_101362690_101369997_101370080_101371632_101371702_101374535_101374635_101375143_101375315_101390477
transcript_205219.known	chrX	-	1208	8	FSM	ENSG00000102393.14	ENST00000486121.6	1208	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	116.283783767759	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTGTGAAAAGGAAGCTAG	NA	False	NA	NA	False	NA	NA	NA	101407833	101397935	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_101398100_101398369_101398568_101398784_101398947_101400665_101400758_101401232_101401348_101401631_101401810_101403810_101403986_101407709
transcript_205220.known	chrX	-	1318	7	FSM	ENSG00000102393.14	ENST00000218516.4	1318	7	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_4	26.4033878297632	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTATTGCCAACTACTA	NA	False	NA	-19	True	ATTAAA	-20	NA	101407925	101397802	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_101398100_101398369_101398568_101398784_101398947_101400665_101400758_101401631_101401810_101403810_101403986_101407709
transcript_205221.known	chrX	-	1254	7	FSM	ENSG00000102393.14	ENST00000676156.1	1254	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	96.518852505036	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTATTTTATTGCCAA	NA	False	NA	-25	True	ATTAAA	-14	NA	101407903	101397808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_101398100_101398369_101398568_101398784_101398947_101400665_101400758_101401667_101401810_101403810_101403986_101407709
transcript_205223.known	chrX	+	433	6	FSM	ENSG00000241343.10	ENST00000372849.8	433	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	3755.70726228762	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTTCACTTCATTTGTT	101305422	True	NA	16	True	AATAAA	-10	NA	101391015	101395786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_101391047_101391458_101391565_101391754_101391823_101392049_101392096_101395334_101395458_101395727
transcript_205225.known	chrX	-	1431	6	FSM	ENSG00000102393.14	ENST00000466414.2	1431	6	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_3	28.1950350239187	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTATTGCCAACTACT	NA	False	NA	-20	True	ATTAAA	-19	NA	101407822	101397803	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_101398100_101398369_101398947_101400665_101400758_101401631_101401810_101403810_101403986_101407709
transcript_205226.known	chrX	+	761	5	FSM	ENSG00000241343.10	ENST00000553110.8	761	5	0	0	0	0	multi-exon	FALSE	canonical	3	5778	junction_4	1234.79580801848	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACACAGTACACTGTAACAT	101305417	True	NA	6	True	AATAAA	-22	NA	101391010	101396155	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_101391047_101391458_101391565_101391754_101391823_101395334_101395458_101395727
transcript_205227.known	chrX	+	399	5	FSM	ENSG00000241343.10	ENST00000471855.1	399	5	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	3501.47561750757	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCATTTGTTTGCTGTTCA	101391184	False	NA	25	True	AATAAA	-19	NA	101391201	101395795	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_101391236_101391458_101391565_101391754_101391823_101395334_101395458_101395727
transcript_205228.known	chrX	+	691	4	FSM	ENSG00000241343.10	ENST00000392994.7	691	4	0	0	0	0	multi-exon	FALSE	canonical	3	7278	junction_1	732.126127567284	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTCATTTGTTTGCTGTT	101305395	True	NA	23	True	AATAAA	-17	NA	101390988	101395793	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_101391047_101391458_101391565_101391754_101391823_101395334
transcript_205229.known	chrX	+	2240	3	FSM	ENSG00000241343.10	ENST00000465340.5	2240	3	0	0	0	0	multi-exon	FALSE	canonical	3	7278	junction_1	891.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACATAAGGAAATAAAA	101305417	True	NA	-5	True	AAAAAG	-9	NA	101391010	101393852	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_101391047_101391458_101391565_101391754
transcript_205231.known	chrX	+	2296	2	FSM	ENSG00000126945.9	ENST00000316594.6	2296	2	0	0	0	0	multi-exon	FALSE	canonical	3	837	junction_1	0	740	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAACTGATTGATTTTT	101396930	True	NA	26	True	AATAAA	-26	NA	101408221	101414133	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_101408320_101411935
transcript_205242.known	chrX	+	346	2	FSM	ENSG00000196440.12	ENST00000453574.1	346	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTTGGTGGTTCTCAAAT	101417068	True	NA	16	True	TTTAAA	-35	NA	101418298	101419183	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_101418371_101418909
transcript_205245.known	chrX	+	3788	13	FSM	ENSG00000196440.12	ENST00000354842.5	3788	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	7.3875834268649	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTAGATTTTTTTACTG	101483782	True	NA	11	True	ATTAAA	-16	NA	101485474	101533459	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_101485531_101486022_101486093_101487192_101487273_101487607_101487692_101488043_101488100_101488443_101489316_101498144_101499367_101504936_101505356_101509363_101509428_101509589_101509679_101511024_101511056_101531643_101532013_101533083
transcript_205246.known	chrX	+	2125	4	FSM	ENSG00000126947.13	ENST00000372829.8	2125	4	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	19.6129209111409	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTTGTCCTTGTCCTTGT	101546941	True	NA	NA	False	AATAAA	-30	NA	101550546	101554700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_101550661_101550970_101551025_101551568_101551634_101552808
transcript_205247.nnic	chrX	+	2084	3	NIC	ENSG00000126947.13	novel	2125	4	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	87	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTTGTCCTTGTCCTTGT	101546928	True	NA	NA	False	AATAAA	-30	NA	101550533	101554700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_101550661_101551568_101551634_101552808
transcript_205248.known	chrX	-	542	5	FSM	ENSG00000198960.11	ENST00000462302.5	542	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	53.260562332743	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTCTGCAGGCAATGTT	NA	False	NA	NA	False	GGGGCT	-31	NA	101617913	101615512	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_101615761_101616671_101616767_101617282_101617371_101617502_101617585_101617884
transcript_205250.known	chrX	-	846	4	FSM	ENSG00000198960.11	ENST00000497931.5	846	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	19.6015872373189	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGGTCCTTGTCCTTGA	NA	False	NA	NA	False	AATAAA	-28	NA	101617910	101615117	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_101615761_101616671_101616767_101617502_101617585_101617884
transcript_205252.known	chrX	-	1928	4	FSM	ENSG00000198960.11	ENST00000539247.5	1928	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	57.8638248150105	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAAGAGTCATGGTCCTT	NA	False	NA	NA	False	AATAAA	-20	NA	101618001	101615125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_101616767_101617282_101617371_101617502_101617585_101617884
transcript_205254.known	chrX	-	1840	3	FSM	ENSG00000198960.11	ENST00000361910.9	1840	3	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_2	1.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGAGTCATGGTCCTTG	NA	False	NA	NA	False	AATAAA	-21	NA	101618000	101615124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_101616767_101617502_101617585_101617884
transcript_205257.known	chrX	+	3730	5	FSM	ENSG00000102401.20	ENST00000341189.8	3730	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	46.8401537145215	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTGTAAAGTTCTATC	101622785	False	NA	27	True	AATAAA	-37	NA	101622796	101627843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_101623277_101623785_101623894_101624157_101624219_101624479_101624551_101624833
transcript_205260.known	chrX	+	3348	5	FSM	ENSG00000102401.20	ENST00000471229.7	3348	5	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	28.6476438821764	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTGTAAAGTTCTATC	101620922	True	NA	27	True	AATAAA	-37	NA	101623150	101627843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_101623277_101623813_101623894_101624157_101624219_101624479_101624551_101624833
transcript_205263.known	chrX	+	3318	5	FSM	ENSG00000102401.20	ENST00000537169.1	3318	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	67.4240313241503	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTACTGTGTAAAGTTCTA	101621132	False	NA	25	True	AATAAA	-35	NA	101623360	101627841	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_101623431_101623785_101623894_101624157_101624219_101624479_101624551_101624833
transcript_205265.known	chrX	+	506	5	FSM	ENSG00000102401.20	ENST00000467808.5	506	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	66.1338604649691	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTGCTATTGTCGGGGA	101621027	False	NA	NA	False	NA	NA	NA	101623255	101624952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_101623431_101623813_101623894_101624157_101624219_101624479_101624551_101624833
transcript_205268.known	chrX	-	758	6	FSM	ENSG00000184867.14	ENST00000458024.5	758	6	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_4	87.8831041782207	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCTGAGGCAGTGGCCC	NA	False	NA	NA	False	NA	NA	NA	101659831	101657310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_101657716_101658072_101658143_101658460_101658526_101659075_101659137_101659418_101659502_101659757
transcript_205269.nnic	chrX	-	2869	6	NNC	ENSG00000184867.14	novel	2819	6	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	104.661358676448	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGTTCTAATGCTTGAATT	NA	False	NA	0	True	AATAAA	-25	NA	101659867	101655280	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_101657716_101658072_101658143_101658460_101658526_101659075_101659149_101659418_101659535_101659757
transcript_205270.known	chrX	-	612	6	FSM	ENSG00000184867.14	ENST00000479333.5	612	6	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_3	84.4952069646557	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACAAATACACCAGGGGGA	NA	False	NA	NA	False	GGGGCT	-18	NA	101659836	101657517	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_101657716_101658072_101658143_101658460_101658570_101659075_101659149_101659418_101659502_101659757
transcript_205272.nic	chrX	-	2861	6	NIC	ENSG00000184867.14	novel	2819	6	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_2	107.138415146016	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGTTCTAATGCTTGAATT	NA	False	NA	0	True	AATAAA	-25	NA	101659879	101655280	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_101657716_101658072_101658143_101658491_101658570_101659075_101659149_101659418_101659502_101659757
transcript_205275.known	chrX	-	914	5	FSM	ENSG00000184867.14	ENST00000413506.5	914	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	103.82286597855	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGCGGAGACTTCCAGG	NA	False	NA	NA	False	GGGGCT	-23	NA	101659834	101657086	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_101657716_101658072_101658143_101658460_101658526_101659075_101659149_101659757
transcript_205282.known	chrX	+	1110	3	FSM	ENSG00000184905.9	ENST00000372780.6	1110	3	0	0	0	0	multi-exon	TRUE	canonical	3	121	junction_1	7.5	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACAGAATCTGTCTGTTT	102123719	True	NA	11	True	AATAAA	-17	NA	102125678	102127712	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_102125807_102126372_102126446_102126803
transcript_205286.known	chrX	-	1106	3	NIC	ENSG00000204071.11	novel	1104	4	NA	NA	0	0	intron_retention	TRUE	canonical	3	12	junction_1	5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGTATACGGTTATCAGCCA	NA	False	NA	-5	True	AATAAA	-26	NA	102142505	102140475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_102141356_102141713_102141787_102142352
transcript_205287.known	chrX	-	777	3	FSM	ENSG00000184515.11	ENST00000333643.4	777	3	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	13	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTACAGATAGACTATTTC	NA	False	NA	-9	True	AATAAA	-15	NA	102155977	102153711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_102154303_102154743_102154811_102155858
transcript_205288.known	chrX	-	634	3	FSM	ENSG00000158164.7	ENST00000289373.5	634	3	0	0	0	0	multi-exon	TRUE	canonical	3	866	junction_1	5	295	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGACTCCTGTGGTTG	NA	False	NA	-7	True	AATAAA	-20	NA	102516739	102513681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_102514125_102515063_102515181_102516665
transcript_20529.known	chr1	+	593	2	FSM	ENSG00000143641.10	ENST00000488903.1	593	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATGTAGTTTCTGCGTT	230063916	True	NA	NA	False	ATTAAA	-18	NA	230067258	230092033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_230067407_230091588
transcript_205298.known	chrX	+	668	4	FSM	ENSG00000271147.8	ENST00000475738.5	668	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	28.7672653471886	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCTGGTAAGCAAATAGAG	102597732	True	NA	NA	False	AATAGA	-14	NA	102599525	102639527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_102599848_102601463_102601510_102605481_102605654_102639399
transcript_205303.known	chrX	+	2899	6	FSM	ENSG00000125962.16	ENST00000246174.6	2899	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	43.5366512262944	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCCTAGTTCTTCAGC	102599135	True	NA	17	True	AATAAA	-25	NA	102599167	102604159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_102599267_102599347_102599573_102599711_102599848_102600919_102601033_102601463_102601510_102601879
transcript_205306.known	chrX	+	5971	5	FSM	ENSG00000198932.13	ENST00000361600.9	5971	5	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_3	4.06201920231798	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATGTGAAGTGTATATTA	102651192	True	NA	NA	False	AATAAA	-20	NA	102651365	102659083	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_102651596_102652174_102652266_102652830_102652899_102653220_102653299_102653579
transcript_205308.known	chrX	+	2636	3	FSM	ENSG00000125962.16	ENST00000479502.2	2636	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	22	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCCTAGTTCTTCAGC	102597744	True	NA	17	True	AATAAA	-25	NA	102599537	102604159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_102599848_102601463_102601510_102601879
transcript_205309.known	chrX	+	2777	4	FSM	ENSG00000125962.16	ENST00000473968.7	2772	4	-5	0	-5	0	multi-exon	FALSE	canonical	3	30	junction_1	43.3922676163494	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCCTAGTTCTTCAGC	102597716	True	NA	17	True	AATAAA	-25	NA	102599509	102604159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_102599848_102600919_102601033_102601463_102601510_102601879
transcript_205315.known	chrX	+	3534	5	FSM	ENSG00000158301.20	ENST00000483720.7	3536	5	0	2	0	0	multi-exon	FALSE	canonical	0	0	junction_1	34.8523672079817	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAAGTGACCCTTCTTCAG	102710967	True	NA	11	True	AATAAA	-19	NA	102712447	102717731	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_102712553_102713129_102713218_102713781_102713850_102714188_102714267_102714536
transcript_205316.known	chrX	+	3576	5	FSM	ENSG00000158301.20	ENST00000486814.2	3576	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	34.8523672079817	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAAGTGACCCTTCTTCAG	102710964	True	NA	11	True	AATAAA	-19	NA	102712444	102717731	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_102712553_102713090_102713218_102713781_102713850_102714188_102714267_102714536
transcript_205317.known	chrX	+	3451	4	FSM	ENSG00000158301.20	ENST00000332262.10	3451	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	38.6637929966641	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGACCCTTCTTCAGTT	102710964	True	NA	13	True	AATAAA	-21	NA	102712444	102717733	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_102712553_102713781_102713850_102714188_102714267_102714536
transcript_205318.known	chrX	+	4031	3	FSM	ENSG00000198908.12	ENST00000447531.5	4031	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	36.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTTTGAATCACTTAAT	102744828	True	NA	8	True	AATAAA	-15	NA	102745978	102752438	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_102746175_102747816_102747912_102748698
transcript_205322.known	chrX	+	3974	3	FSM	ENSG00000198908.12	ENST00000361229.8	3974	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	11	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGAATCACTTAATATT	102719810	True	NA	11	True	AATAAA	-18	NA	102720725	102752441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_102720822_102720956_102721092_102748698
transcript_205323.known	chrX	+	3666	5	FSM	ENSG00000158301.20	ENST00000543253.6	3666	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	40.0562105047395	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGTGACCCTTCTTCAGT	102710964	True	NA	12	True	AATAAA	-20	NA	102712444	102717732	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_102712553_102713129_102713218_102713781_102713850_102714188_102714267_102714408
transcript_205345.known	chrX	+	2101	8	FSM	ENSG00000223546.8	ENST00000440496.5	2101	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	6.64861501612577	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAATAAGTCTTTTTGTG	102768136	True	NA	NA	False	AATAAA	-16	NA	102769178	102885406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_102769342_102770351_102770421_102816991_102817083_102826968_102827145_102839800_102839864_102845856_102846021_102865041_102865153_102884142
transcript_205355.known	chrX	-	795	3	FSM	ENSG00000133169.6	ENST00000372728.4	795	3	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_2	27.5	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTATATTCTTTTTTTGT	NA	False	NA	-5	True	AATAAA	-18	NA	103064171	103062650	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_103063280_103063641_103063732_103064095
transcript_205357.known	chrX	+	1312	3	FSM	ENSG00000102409.10	ENST00000372695.6	1312	3	0	0	0	0	multi-exon	FALSE	canonical	3	1058	junction_1	16	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGACTGATGATTATAGGA	103196660	True	NA	66	True	ATTAAA	-25	NA	103215107	103217246	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103215239_103215681_103215765_103216148
transcript_205359.known	chrX	+	1066	2	FSM	ENSG00000102409.10	ENST00000372691.3	1066	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATTGGTGTGTGTGTACG	103196676	True	NA	-81	True	NA	NA	NA	103215123	103217099	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103215239_103216148
transcript_205360.known	chrX	-	1174	3	FSM	ENSG00000180964.17	ENST00000372685.8	1174	3	0	0	0	0	multi-exon	FALSE	canonical	3	790	junction_2	5.5	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACGTTTAAGACTCAGTC	NA	False	NA	-9	True	AATAAA	-20	NA	103255155	103252994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_103254018_103254604_103254678_103255077
transcript_205361.known	chrX	-	1131	2	FSM	ENSG00000180964.17	ENST00000360000.8	1131	2	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACGTTTAAGACTCAGTC	NA	False	NA	-9	True	AATAAA	-20	NA	103255185	103252994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_103254018_103255077
transcript_205364.known	chrX	-	1046	3	FSM	ENSG00000204065.3	ENST00000372680.2	1046	3	0	0	0	0	multi-exon	TRUE	canonical	3	38	junction_2	8	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACAGTATCAGCCCATTT	NA	False	NA	-17	True	AATAAA	-21	NA	103276750	103273690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_103274591_103275274_103275343_103276672
transcript_205368.known	chrX	-	736	3	FSM	ENSG00000133134.12	ENST00000449185.1	736	3	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_2	200.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTGAGTCATAGTTTGC	NA	False	NA	NA	False	NA	NA	NA	103310935	103309671	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_103309982_103310357_103310434_103310585
transcript_205369.known	chrX	-	843	3	FSM	ENSG00000133134.12	ENST00000372677.8	843	3	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_2	31	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGCATTCTTTTTTAC	NA	False	NA	-1	True	AATAAA	-17	NA	103310990	103309345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_103309982_103310357_103310434_103310859
transcript_205370.known	chrX	-	668	3	FSM	ENSG00000133134.12	ENST00000372674.5	668	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	169.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTACCTATTTCTTGTGGG	NA	False	NA	NA	False	NA	NA	NA	103311007	103309501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_103309982_103310357_103310434_103310895
transcript_205371.known	chrX	+	1134	3	FSM	ENSG00000182916.8	ENST00000332431.5	1134	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	15.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACGTTTAAGACTCAGTC	103329705	True	NA	NA	False	AATAAA	-20	NA	103330238	103332326	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103330305_103330922_103331041_103331376
transcript_205373.known	chrX	+	1028	3	FSM	ENSG00000185222.10	ENST00000372661.6	1028	3	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_2	4.5	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAACAAGCAGCACGTATTA	103350917	True	NA	103	True	AATAAA	-18	NA	103356505	103358462	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103356607_103357082_103357162_103357614
transcript_205376.known	chrX	+	699	2	FSM	ENSG00000185222.10	ENST00000372656.5	699	2	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTACACATTTGTAAAAAA	103350900	True	NA	-5	True	AATAAA	-5	NA	103356488	103358195	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103356607_103357614
transcript_205379.known	chrX	+	1938	1	FSM	ENSG00000185222.10	ENST00000646896.1	1938	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAGCAACAAGCAGCA	103350929	True	NA	96	True	AATAAA	-11	NA	103356517	103358455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103356500_103358500
transcript_20538.known	chr1	+	2843	18	FSM	ENSG00000135775.14	ENST00000366668.7	2843	18	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_14	39.1794734761522	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGTGTGCTCGTTTTCT	230639865	True	NA	8	True	AATAAA	-15	NA	230642566	230693982	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_230642679_230659463_230659626_230660757_230660824_230663140_230663222_230664483_230664588_230668675_230668785_230669355_230669536_230671515_230671641_230674997_230675125_230678912_230679053_230683573_230683636_230685084_230685237_230686934_230687133_230688070_230688144_230688422_230688563_230690013_230690154_230691383_230691565_230693291
transcript_205380.known	chrX	+	805	2	FSM	ENSG00000166681.14	ENST00000372635.1	805	2	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTAAAAAGCAATCTATAC	103376287	False	NA	31	True	AATAAA	-4	NA	103376406	103378060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103376614_103377462
transcript_205381.known	chrX	+	913	3	FSM	ENSG00000166681.14	ENST00000372645.3	913	3	0	0	0	0	multi-exon	FALSE	canonical	3	790	junction_2	1981.5	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTTATTGTCTCATTAA	103376239	False	NA	48	True	AATAAA	-21	NA	103376394	103378077	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103376614_103377027_103377107_103377462
transcript_205382.known	chrX	+	810	3	FSM	ENSG00000166681.14	ENST00000361298.9	810	3	0	0	0	0	multi-exon	FALSE	canonical	3	3784	junction_2	484.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGAACATTTCTGTGTG	103333378	True	NA	135	True	ATTAAA	-17	NA	103376537	103378164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103376614_103377027_103377107_103377509
transcript_205383.known	chrX	+	753	2	FSM	ENSG00000166681.14	ENST00000372634.1	753	2	0	0	0	0	multi-exon	FALSE	canonical	3	3784	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTATACATTTATTGTCT	103376836	False	NA	42	True	AATAAA	-15	NA	103376915	103378071	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103377107_103377509
transcript_205391.known	chrX	+	681	4	FSM	ENSG00000133142.19	ENST00000490644.5	681	4	0	0	0	0	multi-exon	TRUE	canonical	2	19	junction_2	394.594306429612	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGGAGGGAGAGTCAGAGA	103575467	True	NA	89	True	GATAAA	-45	NA	103585522	103586905	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103585625_103585858_103586108_103586218_103586292_103586648
transcript_205392.known	chrX	+	1008	3	FSM	ENSG00000133142.19	ENST00000494801.5	1008	3	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_2	395.5	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGTACATTTTTGTAAAA	103575507	True	NA	23	True	ATTAAA	-31	NA	103585562	103587526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103585625_103586218_103586292_103586653
transcript_205396.known	chrX	+	1571	3	FSM	ENSG00000133142.19	ENST00000472745.1	1571	3	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	403	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTCATAAAAATAATAAAATA	103575477	True	NA	-23	True	AAAACA	-11	NA	103585532	103587694	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103585625_103585858_103586292_103586648
transcript_205398.known	chrX	+	338	3	FSM	ENSG00000133142.19	ENST00000425011.1	338	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	77.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAGGATAAAGGAAAGCC	103575559	True	NA	33	True	AAAACA	-27	NA	103585614	103586849	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103585684_103586218_103586292_103586653
transcript_205403.known	chrX	+	959	2	FSM	ENSG00000133142.19	ENST00000415568.2	959	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTTGCAGAACCAAATATA	103575459	True	NA	-1	True	ATTAAA	-7	NA	103585514	103587502	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103585625_103586653
transcript_205404.known	chrX	+	1056	3	FSM	ENSG00000196507.11	ENST00000372627.10	1056	3	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	21.5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACAGTATCAGCCCGTTT	103605450	True	NA	21	True	AATAAA	-32	NA	103607962	103609927	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103608059_103608603_103608674_103609037
transcript_205406.known	chrX	+	1164	3	FSM	ENSG00000172465.14	ENST00000372624.3	1164	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	4	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAATCCTATGTTTTTTTC	103628971	True	NA	NA	False	AATAAA	-24	NA	103628998	103630953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103629026_103629493_103629562_103629884
transcript_205407.nnic	chrX	+	1193	2	NNC	ENSG00000172465.14	novel	766	2	NA	NA	685	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAATCCTATGTTTTTTTC	103629491	True	NA	NA	False	AATAAA	-24	NA	103629683	103630953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_103629808_103629884
transcript_205415.nic	chrX	-	2072	5	NIC	ENSG00000123562.18	novel	869	5	NA	NA	-91	0	combination_of_known_junctions	FALSE	canonical	3	282	junction_2	714.165378256325	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAATTTGTAGTGTGCCT	NA	False	NA	-6	True	AATAAA	-23	NA	103686909	103675499	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_103677052_103678498_103678601_103684680_103684730_103685170_103685261_103686630
transcript_205416.known	chrX	-	849	5	FSM	ENSG00000123562.18	ENST00000418819.5	849	5	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_4	691.737847742915	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGTTAATGAAGTTGTGGC	NA	False	NA	NA	False	AAGAAA	-31	NA	103688041	103676496	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_103677052_103678498_103678601_103684680_103684730_103685170_103685261_103687988
transcript_205417.known	chrX	-	562	5	FSM	ENSG00000123562.18	ENST00000422355.5	562	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	789.69519436299	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGGATCCGTGAGGAAG	NA	False	NA	NA	False	NA	NA	NA	103686705	103676825	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_103677052_103678498_103678621_103684680_103684730_103685170_103685261_103686630
transcript_205420.known	chrX	-	869	5	FSM	ENSG00000123562.18	ENST00000442614.5	869	5	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_2	737.224991098376	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAGGAGTATGCAAATTG	NA	False	NA	NA	False	AAGAAA	-16	NA	103686709	103676553	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_103677052_103678498_103678652_103684680_103684730_103685170_103685261_103686630
transcript_205421.known	chrX	-	899	5	FSM	ENSG00000123562.18	ENST00000434230.5	899	5	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_2	705.391557930771	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAATGAAGTTGTGGCAG	NA	False	NA	NA	False	AAGAAA	-33	NA	103688038	103676494	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_103677052_103678498_103678652_103684680_103684730_103685170_103685261_103687988
transcript_205424.known	chrX	-	451	4	FSM	ENSG00000123562.18	ENST00000498064.1	451	4	0	0	0	0	multi-exon	FALSE	canonical	3	905	junction_2	446.164643252789	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAGAGAACTTCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	103686816	103676978	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_103677052_103678498_103678601_103685170_103685261_103686630
transcript_205425.known	chrX	-	1824	4	FSM	ENSG00000123562.18	ENST00000360458.5	1824	4	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_3	699.718673626924	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTAGTGTGCCTTTCA	NA	False	NA	-2	True	AATAAA	-27	NA	103688064	103675495	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_103677052_103678498_103678601_103685170_103685261_103687988
transcript_205426.nnic	chrX	-	1856	4	NIC	ENSG00000123562.18	novel	562	5	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	3	61	junction_2	840.922641441464	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAATTTGTAGTGTGCCT	NA	False	NA	-6	True	AATAAA	-23	NA	103686722	103675499	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_103677052_103678498_103678621_103685170_103685261_103686630
transcript_205428.known	chrX	-	370	4	FSM	ENSG00000123562.18	ENST00000467755.5	370	4	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_2	651.022955731124	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAGAGAACTTCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	103686684	103676978	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_103677052_103678498_103678652_103685170_103685261_103686630
transcript_205429.known	chrX	-	1965	4	FSM	ENSG00000123562.18	ENST00000433176.6	1965	4	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_3	752.713461787123	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAATTTGTAGTGTGCCT	NA	False	NA	-6	True	AATAAA	-23	NA	103688158	103675499	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_103677052_103678498_103678652_103685170_103685261_103687988
transcript_205432.known	chrX	-	1830	3	FSM	ENSG00000123562.18	ENST00000451301.5	1830	3	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	827.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAATTTGTAGTGTGCCT	NA	False	NA	-6	True	AATAAA	-23	NA	103686818	103675499	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_103677052_103685170_103685261_103686630
transcript_205433.known	chrX	-	582	3	FSM	ENSG00000123562.18	ENST00000492116.5	582	3	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	70	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGGCGTTTAAGAATAGA	NA	False	NA	NA	False	AAGAAA	-32	NA	103688122	103676693	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_103677052_103685170_103685261_103687988
transcript_205443.nnic	chrX	-	2374	3	NNC	ENSG00000288597.1	novel	4080	2	NA	NA	1570	-4355	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	139	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATGACTGGGAGGAAGTG	NA	False	NA	-3	True	AATAAA	-21	NA	103767045	103753752	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_103755672_103764961_103765155_103766783
transcript_205446.nic	chrX	-	799	3	NIC	ENSG00000288597.1	novel	2186	12	NA	NA	1570	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_1	120.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTTGGTGATTTCACA	NA	False	NA	-3	True	ATTAAA	-22	NA	103767045	103761191	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_103761536_103764961_103765155_103766783
transcript_205447.nic	chrX	-	802	3	ISM	ENSG00000288597.1	ENST00000674274.1	2186	12	65188	0	1570	0	3prime_fragment	FALSE	canonical	3	65	junction_1	124.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTTGGTGATTTCACA	NA	False	NA	-3	True	ATTAAA	-22	NA	103767045	103761191	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_103761539_103764961_103765155_103766783
transcript_205448.known	chrX	-	4080	2	FSM	ENSG00000288597.1	ENST00000674403.1	4080	2	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATCTCTCTTATTTA	NA	False	NA	NA	False	AATAAA	-8	NA	103768615	103762906	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_103765155_103766783
transcript_205455.nnic	chrX	+	3604	10	NNC	ENSG00000123560.14	novel	2896	7	NA	NA	-31127	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	44.0978149566463	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGTGTCCTTTGAGTGAA	103740667	True	NA	6	True	AATAAA	-23	NA	103742590	103792619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_103743108_103746874_103746923_103774216_103774363_103776852_103777000_103785581_103785769_103786464_103786622_103787797_103787967_103788436_103788511_103789332_103789399_103790526
transcript_205457.nnic	chrX	+	3610	10	NNC	ENSG00000123560.14	novel	2896	7	NA	NA	-31127	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	41.7957998953111	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGTGTCCTTTGAGTGAA	103740667	True	NA	6	True	AATAAA	-23	NA	103742590	103792619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_103743108_103746874_103746923_103774216_103774369_103776852_103777000_103785581_103785769_103786464_103786622_103787797_103787967_103788436_103788511_103789332_103789399_103790526
transcript_205459.nnic	chrX	+	3458	9	NNC	ENSG00000123560.14	novel	2896	7	NA	NA	-31127	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	36.5684290064531	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGTGTCCTTTGAGTGAA	103740667	True	NA	6	True	AATAAA	-23	NA	103742590	103792619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_103743108_103746874_103746923_103776852_103777000_103785581_103785769_103786464_103786622_103787797_103787967_103788436_103788511_103789332_103789399_103790526
transcript_205462.nnic	chrX	+	3396	8	NNC	ENSG00000123560.14	novel	2896	7	NA	NA	-31113	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_1	34.9647052360648	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGTGTCCTTTGAGTGAA	103740681	True	NA	6	True	AATAAA	-23	NA	103742604	103792619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_103743108_103776852_103777000_103785581_103785769_103786464_103786622_103787797_103787967_103788436_103788511_103789332_103789399_103790526
transcript_205463.known	chrX	+	2896	7	FSM	ENSG00000123560.14	ENST00000619236.1	2896	7	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_6	8.5374989832438	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGTGTCCTTTGAGTGAA	103776531	True	NA	6	True	AATAAA	-23	NA	103776849	103792619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103777000_103785581_103785769_103786464_103786622_103787797_103787967_103788436_103788511_103789332_103789399_103790526
transcript_205464.known	chrX	+	1666	4	FSM	ENSG00000158427.15	ENST00000419165.5	1666	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	75.455652906562	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTGTGGTTCATTCTG	103918851	True	NA	NA	False	AATAAA	-25	NA	103918895	103965987	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103919293_103962020_103962724_103964505_103964623_103965538
transcript_205465.known	chrX	+	663	4	FSM	ENSG00000158427.15	ENST00000569577.1	663	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	66.9593574906118	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATAATCGTTGTTGTCT	103962492	True	NA	NA	False	AATAAA	-6	NA	103962674	103965968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103962724_103964227_103964295_103964505_103964623_103965538
transcript_205466.known	chrX	-	894	5	FSM	ENSG00000231728.5	ENST00000674424.1	894	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.6583123951777	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCAAAGGTTGCTAAAATG	NA	False	NA	NA	False	AATAAA	-28	NA	103919539	103913348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_103913688_103918086_103918226_103918408_103918461_103918831_103919081_103919424
transcript_205467.known	chrX	+	652	3	FSM	ENSG00000158427.15	ENST00000540220.6	652	3	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	18	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTGTTGTCTGACTCTGT	103962444	True	NA	NA	False	AATAAA	-14	NA	103962626	103965976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103962724_103964505_103964623_103965538
transcript_205468.known	chrX	+	2186	3	FSM	ENSG00000158427.15	ENST00000436583.5	2186	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	70	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTGACTCTGTGGTTC	103962486	True	NA	NA	False	AATAAA	-19	NA	103962668	103965981	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103964295_103964505_103964623_103965538
transcript_205469.known	chrX	+	2002	2	FSM	ENSG00000158427.15	ENST00000455723.1	2002	2	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGTCAAAAGAAAAAGA	103919043	True	NA	NA	False	CATAAA	-33	NA	103919186	103932911	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_103919293_103931015
transcript_205473.known	chrX	+	312	3	FSM	ENSG00000166707.12	ENST00000603049.1	312	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGAGAAATAACGGGGGAA	104112653	False	NA	NA	False	AATAAA	-33	NA	104112888	104113580	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_104113002_104113194_104113247_104113433
transcript_205477.known	chrX	-	731	2	FSM	ENSG00000269743.3	ENST00000467290.1	731	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGATAGTGGGATGCTT	NA	False	NA	NA	False	NA	NA	NA	104156988	104130603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_104131224_104156877
transcript_205478.nic	chrX	+	3071	6	NIC	ENSG00000123575.9	novel	7624	6	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_5	53.8345613895014	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTAGTCTTTCTTACT	104163249	True	NA	27	True	AATAAA	-24	NA	104166420	104191446	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_104166983_104175622_104175843_104186065_104186216_104186459_104186622_104188039_104188178_104189607
transcript_205479.known	chrX	+	7624	6	FSM	ENSG00000123575.9	ENST00000493442.2	7624	6	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_4	9.26498785752038	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCGTGTGTGTGTTTCTT	104163281	True	NA	16	True	AATAAA	-24	NA	104166452	104195902	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_104166983_104175622_104175843_104186065_104186216_104186459_104186622_104188039_104188307_104189607
transcript_205485.known	chrX	+	4173	4	FSM	ENSG00000157502.13	ENST00000357175.6	4173	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.88561808316413	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGATTTTTACTTCATC	106168210	True	NA	6	True	AATAAA	-17	NA	106168304	106208956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_106168426_106171011_106171140_106203984_106204171_106205218
transcript_205487.known	chrX	+	3957	3	FSM	ENSG00000157502.13	ENST00000372552.1	3957	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGGATTTTTACTTCAT	106201721	False	NA	5	True	AATAAA	-16	NA	106201735	106208955	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_106201770_106203984_106204171_106205218
transcript_205488.known	chrX	+	3852	14	FSM	ENSG00000147231.14	ENST00000372548.9	3852	14	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_8	7.30080647243364	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTTTTTGGTCTCCTGTC	106611750	True	NA	6	True	ATTAAA	-16	NA	106611977	106679439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_106612724_106622650_106622794_106625089_106625283_106632624_106632734_106632931_106633024_106633129_106633253_106636542_106636648_106637759_106637925_106639526_106639688_106640551_106640722_106648312_106648387_106662014_106662306_106669162_106669331_106678127
transcript_205489.known	chrX	+	2880	13	FSM	ENSG00000147231.14	ENST00000421550.1	2880	13	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_8	8.17516564562048	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAACTTTTTGGTCTCCTG	106612429	False	NA	4	True	ATTAAA	-14	NA	106612656	106679437	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_106612724_106622650_106622794_106625089_106625283_106632624_106632734_106632931_106633024_106633129_106633253_106636542_106636648_106637759_106637795_106640551_106640722_106648312_106648387_106662014_106662306_106669162_106669331_106678127
transcript_205491.known	chrX	+	2803	7	FSM	ENSG00000133135.14	ENST00000255499.3	2803	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	3.05505046330389	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCTGTATTAGGATGTTT	106726608	True	NA	NA	False	AATAAA	-38	NA	106726700	106797016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_106727398_106772912_106773161_106785064_106785137_106787917_106788001_106790185_106790283_106791065_106791235_106795579
transcript_205493.known	chrX	-	3798	17	FSM	ENSG00000133131.15	ENST00000355610.9	3798	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_13	6.23717434019605	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTAGGCTTGGATTTGA	NA	False	NA	-2	True	AATAAA	-16	NA	107000212	106940737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_106941633_106941937_106942222_106942514_106943206_106954912_106955089_106956479_106956535_106956935_106957005_106958335_106958465_106962011_106962111_106976583_106976685_106978079_106978200_106980890_106981020_106981344_106981478_106985095_106985244_106985982_106986201_106993229_106993363_106999676_106999750_106999867
transcript_205495.nic	chrX	-	789	4	ISM	ENSG00000133131.15	ENST00000255495.7	2940	17	-156	44561	-22	-44521	5prime_fragment	FALSE	canonical	2	9	junction_3	0.942809041582063	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATATCCTTTCTGGAAATG	NA	False	NA	NA	False	NA	NA	NA	107000234	106985984	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_106986201_106993229_106993363_106999676_106999750_106999867
transcript_205497.known	chrX	+	5729	21	FSM	ENSG00000133138.20	ENST00000357242.10	5729	21	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_11	4.96588360717405	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTTTACTTAAAAAGATTA	106801265	True	NA	9	True	AATAAA	-23	NA	106802672	106876150	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_106802984_106818662_106818774_106820876_106820996_106821976_106822203_106823225_106823467_106826029_106826238_106827169_106827338_106839307_106839458_106840047_106840199_106840669_106840885_106848185_106848304_106850024_106850311_106853520_106853651_106854197_106854297_106865558_106865628_106865792_106866034_106866796_106866863_106868392_106868477_106869484_106869542_106870715_106870814_106873569
transcript_205500.known	chrX	+	2589	12	FSM	ENSG00000133138.20	ENST00000310452.6	2589	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_11	6.00688310424792	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGAATTGTGTTTCTGA	106801281	True	NA	NA	False	AATAAA	-26	NA	106802688	106849831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_106802984_106818662_106818774_106820876_106820996_106821976_106822203_106823225_106823467_106826029_106826238_106827169_106827338_106839307_106839458_106840047_106840199_106840669_106840885_106848185_106848304_106849244
transcript_205507.known	chrX	+	4098	7	FSM	ENSG00000133138.20	ENST00000481617.6	4098	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	4.85340659285368	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAATTTATAAGAAAAA	106801297	True	NA	NA	False	AATGAA	-4	NA	106802704	106830083	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_106802984_106818662_106818774_106820876_106820996_106821976_106822203_106823225_106823467_106826029_106826238_106827169
transcript_205513.known	chrX	-	1662	7	FSM	ENSG00000089682.17	ENST00000372479.7	1662	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	15.8157797433098	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTTTACTAGAGCCCA	NA	False	NA	-12	True	AATAAA	-21	NA	107118804	107067137	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_107067694_107069254_107069403_107088435_107088840_107115351_107115557_107115861_107116055_107116649_107116767_107118765
transcript_205516.known	chrX	+	2070	7	FSM	ENSG00000147224.13	ENST00000372435.10	2070	7	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_5	13.0384048104053	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGGTCTGTATCATACA	107622447	True	NA	16	True	AATAAA	-19	NA	107628509	107651026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_107628751_107639294_107639479_107640901_107641001_107642365_107642491_107645176_107645351_107647605_107647766_107649939
transcript_205519.known	chrX	+	1434	6	FSM	ENSG00000147224.13	ENST00000372418.4	1434	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	165.70141821964	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCAACCCCAAACCTAGTC	107622427	True	NA	NA	False	NA	NA	NA	107628489	107650469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_107628751_107639294_107639479_107642365_107642491_107645176_107645351_107647605_107647766_107649939
transcript_205520.known	chrX	+	996	6	FSM	ENSG00000147224.13	ENST00000674826.1	996	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	167.733836777199	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATCCCACATCAGGTATA	107622453	True	NA	79	True	NA	NA	NA	107628515	107650142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_107628751_107640901_107641001_107642365_107642491_107645176_107645351_107647605_107647766_107649939
transcript_205522.known	chrX	-	956	4	FSM	ENSG00000157514.18	ENST00000506081.5	956	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	50.6118124112895	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTCCACTCCAGCGACA	NA	False	NA	NA	False	NA	NA	NA	107777067	107714369	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_107714750_107715898_107715951_107775099_107775526_107776969
transcript_205524.known	chrX	-	2199	4	FSM	ENSG00000157514.18	ENST00000372384.6	2199	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	51.8609251320834	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGGTGTCTGACTGAG	NA	False	NA	NA	False	AATAAA	-24	NA	107775988	107713223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_107714750_107715898_107715951_107775099_107775512_107775779
transcript_205526.known	chrX	-	1812	3	FSM	ENSG00000157514.18	ENST00000372390.8	1812	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	53.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGTCTGACTGAGTAT	NA	False	NA	NA	False	AATAAA	-27	NA	107716545	107713220	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_107714750_107715898_107715951_107716314
transcript_205527.known	chrX	-	2027	3	FSM	ENSG00000157514.18	ENST00000372397.6	2027	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	27	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGTCTGACTGAGTAT	NA	False	NA	NA	False	AATAAA	-27	NA	107717135	107713220	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_107714750_107715898_107715951_107716689
transcript_205528.known	chrX	-	2269	3	FSM	ENSG00000157514.18	ENST00000372383.9	2269	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	47	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGTCTGACTGAGTAT	NA	False	NA	NA	False	AATAAA	-27	NA	107775787	107713220	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_107714750_107715898_107715951_107775099
transcript_20553.known	chr1	-	3726	4	FSM	ENSG00000119280.17	ENST00000366663.10	3726	4	0	0	0	0	multi-exon	FALSE	canonical	3	456	junction_2	4.18993502999218	442	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTCTGTGATGGGCCT	-230862924	True	NA	-12	True	AATAAA	-19	NA	230868521	230837118	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_230839909_230843353_230843897_230855667_230855719_230868179
transcript_205530.known	chrX	+	2251	10	FSM	ENSG00000080561.14	ENST00000443968.2	2251	10	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_8	3.82970843102535	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGATATTGCAGATTTAAT	107826403	False	NA	12	True	AATAAA	-25	NA	107826413	107927193	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_107826431_107840669_107841386_107854608_107854705_107903957_107904066_107905477_107905627_107916001_107916130_107917505_107917650_107924342_107924505_107926093_107926302_107926670
transcript_205533.known	chrX	+	7333	10	FSM	ENSG00000080561.14	ENST00000262843.11	7333	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	6.34404552160898	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGTTGTCTCTCGCTG	107825754	True	NA	6	True	AATAAA	-19	NA	107825865	107931637	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_107826431_107840669_107841386_107854608_107854705_107903957_107904066_107905477_107905627_107916001_107916130_107917505_107917740_107924342_107924505_107926093_107926302_107926670
transcript_205537.known	chrX	-	779	6	FSM	ENSG00000101843.19	ENST00000372295.5	779	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	236.793074223044	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATTGTTCTACTGTTGT	NA	False	NA	NA	False	NA	NA	NA	108091542	108084774	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_108085128_108087685_108087853_108087952_108087973_108088095_108088100_108088751_108088851_108091406
transcript_205538.known	chrX	-	878	6	FSM	ENSG00000101843.19	ENST00000372296.5	878	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	272.717729530003	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGTAATGTTCCTCCAT	NA	False	NA	NA	False	NA	NA	NA	108091542	108084596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_108085128_108087764_108087853_108087952_108087973_108088095_108088100_108088751_108088851_108091406
transcript_205539.known	chrX	-	1470	5	FSM	ENSG00000101843.19	ENST00000217958.8	1470	5	0	0	0	0	multi-exon	FALSE	canonical	3	585	junction_2	10.688779163216	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCAATTTTTCTTTCAA	NA	False	NA	-18	True	AATAAA	-13	NA	108091542	108084206	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_108085128_108087685_108087853_108087952_108088100_108088751_108088851_108091406
transcript_205540.known	chrX	-	768	5	FSM	ENSG00000101843.19	ENST00000361815.9	768	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	227.476372399421	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGAGTTACTTGTTCGAA	NA	False	NA	NA	False	TATAAA	-19	NA	108091542	108084829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_108085128_108087764_108087853_108087952_108088100_108088751_108088851_108091406
transcript_205541.known	chrX	-	713	4	FSM	ENSG00000101843.19	ENST00000340200.5	713	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	280.43577200889	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTTGTTCCTGCTGAG	NA	False	NA	NA	False	TATAAA	-6	NA	108091520	108084842	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_108085128_108087685_108087853_108087952_108088100_108091406
transcript_205543.known	chrX	+	2205	13	FSM	ENSG00000101844.18	ENST00000372232.8	2205	13	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_9	5.50946155868853	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTTGACAGCCATATTT	108091397	True	NA	13	True	AATAAA	-22	NA	108091777	108154671	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_108091837_108126076_108126188_108128780_108128853_108131259_108131359_108134056_108134159_108134338_108134412_108137090_108137171_108137803_108137992_108138112_108138192_108150151_108150298_108151801_108151859_108152978_108153088_108153641
transcript_205545.known	chrX	-	6685	45	FSM	ENSG00000197565.17	ENST00000334504.12	6685	45	0	0	0	0	multi-exon	TRUE	canonical	2	15	junction_42	8.68633866130276	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGACTCTTTTGATGTT	NA	False	NA	-21	True	AATAAA	-17	NA	108438422	108155613	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_108157261_108159461_108159749_108160462_108160655_108161618_108161736_108162891_108163039_108164599_108164699_108164876_108165039_108165369_108165487_108169494_108169621_108169944_108170017_108170608_108170717_108170809_108170918_108171386_108171462_108172468_108172533_108174439_108174622_108175089_108175216_108175653_108175798_108176840_108177012_108178683_108178846_108179216_108179439_108180514_108180623_108180896_108180969_108187095_108187280_108187847_108188028_108188516_108188678_108190391_108190497_108191392_108191534_108192472_108192581_108193627_108193698_108194533_108194588_108195081_108195127_108196510_108196580_108202927_108202982_108204319_108204413_108205438_108205481_108205659_108205696_108206517_108206581_108209968_108210005_108211671_108211741_108214111_108214229_108219697_108219743_108221239_108221375_108310747_108310829_108437941_108437994_108438185
transcript_205555.nic	chrX	-	2625	6	ISM	ENSG00000197565.17	ENST00000621266.4	6627	44	-45	56599	-45	1585	5prime_fragment	FALSE	canonical	2	15	junction_3	6.15142259969188	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAGTATAAAACAGA	NA	False	NA	NA	False	AATAAA	-16	NA	108438475	108212206	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_108214229_108219697_108219743_108221239_108221375_108310747_108310829_108437941_108437994_108438185
transcript_205556.known	chrX	-	1889	4	FSM	ENSG00000197565.17	ENST00000461897.5	1889	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	13.0213499897497	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTGTGTATGTATGTA	NA	False	NA	-19	True	AATAAA	-19	NA	108438430	108267641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_108269153_108310747_108310829_108437941_108437994_108438185
transcript_205557.known	chrX	+	6531	53	FSM	ENSG00000188153.14	ENST00000328300.11	6531	53	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_42	25.2060957570507	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTTGTGTATCTCTTC	108436895	True	NA	23	True	ATTAAA	-19	NA	108439837	108697545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_108440207_108539745_108539806_108559063_108559154_108563881_108563927_108568628_108568674_108568758_108568822_108571412_108571467_108571810_108571838_108573573_108573655_108575909_108575973_108577951_108577988_108578077_108578120_108578290_108578384_108580532_108580587_108580681_108580739_108580982_108581028_108582883_108582938_108584483_108584526_108586614_108586748_108591057_108591232_108591560_108591645_108595508_108595602_108596997_108597069_108597376_108597569_108598701_108598871_108601392_108601486_108601884_108601990_108602963_108603062_108606741_108606893_108614910_108615025_108620258_108620427_108621802_108621893_108622675_108622826_108624235_108624335_108625704_108625795_108626209_108626350_108655330_108655458_108665506_108665588_108666495_108666595_108667132_108667184_108668318_108668505_108670227_108670237_108674744_108674754_108677499_108677634_108680678_108680752_108680884_108680957_108681759_108681889_108686030_108686130_108687481_108687695_108692747_108692926_108694806_108694922_108695266_108695440_108696296
transcript_205559.known	chrX	+	6427	51	FSM	ENSG00000188153.14	ENST00000361603.7	6427	51	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_41	23.2232728098345	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTTGTGTATCTCTTC	108436981	False	NA	23	True	ATTAAA	-19	NA	108439923	108697545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_108440207_108539745_108539806_108559063_108559154_108563881_108563927_108568628_108568674_108568758_108568822_108571412_108571467_108571810_108571838_108573573_108573655_108575909_108575973_108577951_108577988_108578077_108578120_108578290_108578384_108580532_108580587_108580681_108580739_108580982_108581028_108582883_108582938_108584483_108584526_108586614_108586748_108591057_108591232_108591560_108591645_108595508_108595602_108596997_108597069_108597376_108597569_108598701_108598871_108601392_108601486_108601884_108601990_108602963_108603062_108606741_108606893_108614910_108615025_108620258_108620427_108621802_108621893_108622675_108622826_108624235_108624335_108625704_108625795_108626209_108626350_108655330_108655458_108665506_108665588_108666495_108666595_108667132_108667184_108668318_108668505_108677499_108677634_108680678_108680752_108680884_108680957_108681759_108681889_108686030_108686130_108687481_108687695_108692747_108692926_108694806_108694922_108695266_108695440_108696296
transcript_205572.nic	chrX	+	2771	24	ISM	ENSG00000188153.14	ENST00000328300.11	6531	53	-50	99323	-50	-28333	5prime_fragment	TRUE	canonical	3	45	junction_1	6.72972695974666	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCATAACCAGCAGTTTAA	108436845	True	NA	NA	False	AATAAA	-26	NA	108439787	108598222	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_108440207_108539745_108539806_108559063_108559154_108563881_108563927_108568628_108568674_108568758_108568822_108571412_108571467_108571810_108571838_108573573_108573655_108575909_108575973_108577951_108577988_108578077_108578120_108578290_108578384_108580532_108580587_108580681_108580739_108580982_108581028_108582883_108582938_108584483_108584526_108586614_108586748_108591057_108591232_108591560_108591645_108595508_108595602_108596997_108597069_108597376
transcript_20558.nic	chr1	-	3336	23	NIC	ENSG00000143643.13	novel	3276	23	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_6	7.34621958212252	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTATGTGTTTATTTTG	-230978243	True	NA	-1	True	AATAAA	-41	NA	230978924	230906242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_230907020_230908711_230908792_230908941_230909021_230911469_230911550_230912622_230912759_230916192_230916300_230920509_230920595_230921420_230921505_230923840_230923934_230924840_230924974_230925516_230925648_230928936_230929094_230931297_230931473_230931735_230931878_230933778_230933862_230939385_230939497_230940439_230940557_230943805_230943899_230945388_230945455_230954332_230954404_230958223_230958300_230961208_230961304_230978559
transcript_205582.known	chrX	+	1561	3	FSM	ENSG00000237863.3	ENST00000664433.1	1561	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATTCCACTATTCTTTTT	108736435	False	NA	NA	False	TTTAAA	-26	NA	108736484	108739223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_108736592_108737264_108737924_108738428
transcript_205585.known	chrX	+	2602	4	FSM	ENSG00000101888.12	ENST00000372106.6	2602	4	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	11.4406682011537	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTTTTAAGGTCTTTTG	109535660	True	NA	27	True	AATAAA	-28	NA	109536843	109544698	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_109537022_109538044_109538132_109541474_109541620_109542506
transcript_205586.known	chrX	+	1085	4	FSM	ENSG00000101888.12	ENST00000372103.1	1085	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	54.2361093327642	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGATGTTCAGTGGTCGTT	109535934	False	NA	NA	False	NA	NA	NA	109537117	109543206	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_109537271_109538044_109538132_109541474_109541620_109542506
transcript_205587.known	chrX	+	2692	5	FSM	ENSG00000101888.12	ENST00000218004.5	2692	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	47.097637945018	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGATTTTCTCAAGATTGT	109535694	True	NA	13	True	AATAAA	-14	NA	109535780	109544684	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_109535978_109536936_109537022_109538044_109538132_109541474_109541620_109542506
transcript_205588.known	chrX	-	5032	16	FSM	ENSG00000068366.21	ENST00000348502.10	5032	16	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_14	53.2596991688421	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCAATTTGTACTTCATT	NA	False	NA	-5	True	AATAAA	-16	NA	109733403	109641336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_109644187_109659353_109659512_109661530_109661646_109663210_109663403_109665419_109665495_109668100_109668274_109669033_109669174_109674401_109674474_109677987_109678112_109678264_109678416_109680997_109681137_109681265_109681376_109682718_109682897_109683135_109683373_109696143_109696197_109733138
transcript_20559.known	chr1	-	3276	23	FSM	ENSG00000143643.13	ENST00000366661.9	3276	23	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_15	6.80847794303737	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTATGTGTTTATTTTG	-230978180	True	NA	-1	True	AATAAA	-41	NA	230978861	230906242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_230907020_230908711_230908792_230908941_230909021_230911469_230911550_230912622_230912759_230916192_230916303_230920509_230920595_230921420_230921505_230923840_230923934_230924840_230924974_230925516_230925648_230928936_230929094_230931297_230931473_230931735_230931878_230933778_230933862_230939385_230939497_230940439_230940557_230943805_230943899_230945388_230945455_230954332_230954404_230958223_230958300_230961208_230961304_230978559
transcript_205590.known	chrX	-	4976	16	FSM	ENSG00000068366.21	ENST00000671846.1	4976	16	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_14	61.1368592222037	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTGTTTAGATTTTGTG	NA	False	NA	-18	True	NA	NA	NA	109733269	109641438	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_109644187_109659353_109659512_109661530_109661646_109663210_109663403_109665419_109665495_109668100_109668274_109669033_109669174_109674401_109674474_109677987_109678112_109678264_109678416_109680997_109681137_109681265_109681376_109682718_109682897_109683135_109683553_109696143_109696197_109733138
transcript_205591.known	chrX	-	5182	16	FSM	ENSG00000068366.21	ENST00000469796.7	5182	16	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_14	60.9139283470264	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAATTTGTACTTCATTAT	NA	False	NA	-3	True	AATAAA	-18	NA	109733257	109641334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_109644187_109659353_109659512_109661530_109661646_109663210_109663403_109665419_109665495_109668100_109668274_109669033_109669174_109674401_109674474_109677987_109678112_109678264_109678416_109680997_109681137_109681265_109681376_109682718_109682897_109683135_109683667_109696143_109696197_109733138
transcript_205592.known	chrX	-	4602	15	FSM	ENSG00000068366.21	ENST00000672282.1	4602	15	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_14	56.4009426032102	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTGGATTTGGAGAGAA	NA	False	NA	-113	True	GATAAA	-11	NA	109733220	109641533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_109644187_109659353_109659512_109661530_109661646_109663210_109663403_109665419_109665495_109668100_109668274_109669033_109669174_109674401_109674474_109677987_109678112_109678264_109678416_109680997_109681137_109681265_109681376_109682718_109682897_109683135_109683376_109733138
transcript_205594.known	chrX	-	4971	15	FSM	ENSG00000068366.21	ENST00000502391.6	4971	15	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_14	59.2831755050215	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATGAGAACAGATAAAGAT	NA	False	NA	NA	False	NA	NA	NA	109733325	109641560	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_109644187_109659353_109659512_109661530_109661646_109663210_109663403_109665419_109665495_109668100_109668274_109669033_109669174_109674401_109674474_109677987_109678112_109678264_109678416_109680997_109681137_109681265_109681376_109682718_109682897_109683135_109683667_109733138
transcript_205596.known	chrX	-	1473	1	FSM	ENSG00000176076.7	ENST00000372101.3	1473	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCAAGACTCTTCTCTCAGA	NA	False	NA	-3	True	AATAAA	-18	NA	109625172	109623699	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_109623700_109625200
transcript_205604.known	chrX	+	5570	7	FSM	ENSG00000157600.12	ENST00000372068.7	5570	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.15320827791344	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGAGTCCTGGCCTTGC	110002532	True	NA	13	True	ATTAAA	-14	NA	110003113	110177788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_110003179_110003500_110004165_110067346_110067397_110109079_110109147_110144797_110144877_110171419_110171521_110173244
transcript_205605.known	chrX	+	5567	7	FSM	ENSG00000157600.12	ENST00000372073.5	5567	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	4.54606056566195	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGAGTCCTGGCCTTGC	110002513	True	NA	13	True	ATTAAA	-14	NA	110003094	110177788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_110003157_110003500_110004165_110067346_110067397_110109079_110109147_110144797_110144877_110171419_110171521_110173244
transcript_205608.known	chrX	+	4975	6	FSM	ENSG00000157600.12	ENST00000372072.7	4975	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	4.4	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACCCAGGAGTCCTGGCC	110002221	False	NA	9	True	ATTAAA	-10	NA	110002634	110177784	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_110002773_110067346_110067397_110109079_110109147_110144797_110144877_110171419_110171521_110173244
transcript_205611.known	chrX	-	5350	6	FSM	ENSG00000101935.12	ENST00000262844.10	5350	6	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_4	12.0731106182293	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATCATTTTATGTTTCTT	NA	False	NA	-6	True	AATAAA	-14	NA	110318085	110194185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_110198635_110200953_110201051_110202445_110202537_110216517_110216633_110264488_110264600_110317598
transcript_205612.known	chrX	-	3052	5	FSM	ENSG00000101935.12	ENST00000372059.6	3052	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	42.292877650971	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGGTAAATAAAACAAGCAA	NA	False	NA	NA	False	AAAAAG	-7	NA	110318084	110196371	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_110198635_110200953_110201051_110202445_110202537_110216517_110216633_110317598
transcript_205615.known	chrX	-	1658	12	FSM	ENSG00000101938.15	ENST00000444321.2	1658	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	8.3557274858735	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACATCTCCTCCAAAGAG	NA	False	NA	NA	False	NA	NA	NA	110795819	110676056	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_110676362_110679335_110679426_110681481_110681650_110688593_110688804_110694162_110694332_110700653_110700722_110719834_110719929_110721384_110721528_110759660_110759755_110762694_110762808_110792087_110792216_110795743
transcript_205620.known	chrX	+	9126	18	FSM	ENSG00000077264.16	ENST00000372007.10	9126	18	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_7	6.52543599147925	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTATTGCTTCTGTCTTCTG	111095422	True	NA	18	True	AATAAA	-19	NA	111096190	111227361	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_111096416_111097389_111097457_111097574_111097685_111103158_111103307_111123076_111123279_111142095_111142197_111147736_111147891_111152409_111152448_111162914_111163047_111163561_111163728_111173017_111173082_111192126_111192176_111192505_111192619_111194300_111194419_111195841_111195942_111196443_111196641_111216420_111216559_111220357
transcript_205627.nnic	chrX	+	1439	6	NNC	ENSG00000077264.16	novel	9126	18	NA	NA	-53	26098	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	6.9108610172684	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTTGAATTCAAAGTCCT	111095369	True	NA	NA	False	AAGAAA	-7	NA	111096137	111124884	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_111096416_111097389_111097457_111097574_111097685_111103158_111103307_111123076_111123279_111124250
transcript_205635.known	chrX	-	3532	13	FSM	ENSG00000077274.9	ENST00000324068.2	3532	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_12	5.79451368873082	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTCTTGACTTGAATTGA	NA	False	NA	-2	True	AATAAA	-21	NA	111270483	111245098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_111246760_111247367_111247505_111247870_111247993_111248568_111248772_111248934_111249058_111250916_111251104_111251208_111251287_111251548_111251743_111252306_111252500_111253007_111253217_111254271_111254404_111263771_111263952_111270370
transcript_205636.known	chrX	-	2476	7	FSM	ENSG00000077279.20	ENST00000488120.2	2476	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	0.816496580927726	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTAGTTTAGAAATTAT	NA	False	NA	NA	False	AAAAAG	-9	NA	111412429	111300607	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_111301744_111312641_111312737_111330918_111331042_111333050_111333154_111400989_111401331_111410034_111410421_111412137
transcript_205642.known	chrX	+	4113	27	FSM	ENSG00000101901.12	ENST00000394780.8	4113	27	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_23	13.5327785275071	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTGGGATTTTTTCTTTT	111678586	True	NA	14	True	AATAAA	-25	NA	111681169	111760649	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_111681300_111682131_111682295_111684964_111685104_111708026_111708394_111708964_111709049_111711674_111711726_111712483_111712531_111713224_111713298_111717845_111717928_111718111_111718275_111720094_111720171_111721602_111721712_111722792_111722858_111723797_111723899_111724933_111725062_111726808_111727056_111727331_111727446_111727613_111727771_111728184_111728306_111730394_111730428_111730524_111730581_111735050_111735123_111736713_111736880_111744667_111744905_111752789_111752831_111757587_111757763_111759733
transcript_20565.known	chr1	-	3112	21	FSM	ENSG00000143643.13	ENST00000366662.8	3112	21	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_17	9.54410813015025	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTATGTGTTTATTTTG	-230978178	True	NA	-1	True	AATAAA	-41	NA	230978859	230906242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_230907020_230908711_230908792_230908941_230909021_230911469_230911550_230912622_230912759_230916192_230916300_230920509_230920595_230921420_230921505_230923840_230923934_230924840_230924974_230925516_230925648_230928936_230929094_230931297_230931473_230931735_230931878_230933778_230933862_230939385_230939497_230940439_230940557_230954332_230954404_230958223_230958300_230961208_230961304_230978559
transcript_205652.known	chrX	+	3236	26	FSM	ENSG00000101901.12	ENST00000495283.5	3236	26	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_23	15.3160830501796	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTGCACTGCCATTTT	111678614	True	NA	NA	False	NA	NA	NA	111681197	111760016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_111681425_111682235_111682295_111684964_111685104_111708026_111708394_111708964_111709049_111711674_111711726_111712483_111712531_111713224_111713298_111717845_111717928_111718111_111718275_111720094_111720171_111721602_111721712_111722792_111722858_111723797_111723899_111724933_111725062_111726808_111727056_111727331_111727446_111727613_111727771_111728184_111728306_111730394_111730428_111730524_111730581_111735050_111735123_111736713_111736880_111752789_111752831_111757587_111757763_111759733
transcript_205657.known	chrX	+	693	5	FSM	ENSG00000101901.12	ENST00000473389.5	693	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	34.1833292702744	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATAGGAAATTTTATGTT	111678605	True	NA	10	True	AATAAA	-19	NA	111681188	111688128	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_111681300_111682131_111682295_111684964_111685104_111686136_111686175_111687886
transcript_205658.known	chrX	+	1098	5	FSM	ENSG00000101901.12	ENST00000492038.5	1098	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	36.1005540123694	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAAAGGACTTATACCAA	111678610	True	NA	NA	False	NA	NA	NA	111681193	111688642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_111681300_111682235_111682295_111684964_111685104_111686136_111686175_111687886
transcript_205660.known	chrX	+	2770	4	FSM	ENSG00000101901.12	ENST00000371979.7	2770	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	25.3902868567227	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTTTGAAATGTTTGCT	111681107	False	NA	NA	False	ATTAAA	-16	NA	111681117	111690172	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_111681300_111682131_111682295_111684964_111685104_111687886
transcript_205662.known	chrX	+	785	4	FSM	ENSG00000101901.12	ENST00000489033.5	785	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	20.2703943940144	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTAGTGAGCATTCACA	111678632	True	NA	101	True	NA	NA	NA	111681215	111688219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_111681425_111682131_111682236_111684964_111685104_111687886
transcript_205663.known	chrX	+	916	4	FSM	ENSG00000101901.12	ENST00000468657.5	916	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	31.0590834807897	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAAGTGGAATTGGAATC	111678595	True	NA	NA	False	NA	NA	NA	111681178	111688254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_111681425_111682131_111682295_111684964_111685104_111687886
transcript_205664.known	chrX	+	679	4	FSM	ENSG00000101901.12	ENST00000482374.5	679	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	33.8854278742681	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATTTTATGTTGTGCAC	111678608	True	NA	16	True	AATAAA	-25	NA	111681191	111688134	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_111681425_111682235_111682295_111684964_111685104_111687886
transcript_205665.known	chrX	+	458	4	FSM	ENSG00000101901.12	ENST00000623189.1	458	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	38.4794317352357	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAAATTTTATGTTGTGC	111681796	False	NA	14	True	AATAAA	-23	NA	111681812	111688132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_111681827_111682235_111682295_111684964_111685104_111687886
transcript_205666.known	chrX	+	620	4	FSM	ENSG00000101901.12	ENST00000482742.5	620	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	36.3715395452116	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCTATGTAATGTGATTA	111681162	True	NA	24	True	AATAAA	-39	NA	111681662	111688040	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_111681827_111682131_111682295_111684964_111685104_111687886
transcript_205667.known	chrX	+	582	3	FSM	ENSG00000101901.12	ENST00000622986.3	582	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	30.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTTGTATTTCTATGT	111678611	True	NA	NA	False	NA	NA	NA	111681194	111685278	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_111681300_111682131_111682295_111684964
transcript_205670.known	chrX	+	585	4	FSM	ENSG00000101901.12	ENST00000623255.1	585	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	22.2910046630673	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAATTAATAAACTTCCTA	111678650	True	NA	-21	True	ATTAAA	-36	NA	111681233	111688097	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_111681300_111682131_111682301_111684964_111685104_111687886
transcript_205673.known	chrX	-	347561	2	FSM	ENSG00000241743.4	ENST00000674361.1	347561	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTTTTGTTGGTTTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	113991976	113616299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_113963600_113991715
transcript_205676.known	chrX	+	811	3	FSM	ENSG00000288595.1	ENST00000674257.1	811	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	14.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTGCCTCGGTCTCTTT	114034423	True	NA	18	True	AATAAA	-18	NA	114040387	114050858	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_114040637_114042335_114042534_114050494
transcript_205677.known	chrX	+	503	3	FSM	ENSG00000288595.1	ENST00000674440.1	503	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	17.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCCAGGAACTATTGCAGAA	114034495	False	NA	NA	False	NA	NA	NA	114040459	114055778	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_114040637_114042335_114042534_114055650
transcript_205684.nnic	chrX	-	1444	2	FSM	ENSG00000289287.1	ENST00000691947.1	1444	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTACACCCATCTCTC	NA	False	NA	-13	True	ATTAAA	-18	NA	114606896	114594405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_114595599_114606645
transcript_205686.nnic	chrX	-	1068	2	FSM	ENSG00000289287.1	ENST00000691947.1	1444	2	0	376	0	-376	multi-exon	FALSE	canonical	3	55	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGTTAAGAGAGAATGGAAA	NA	False	NA	NA	False	TATAAA	-3	NA	114606896	114594781	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_114595599_114606645
transcript_205689.nnic	chrX	-	638	2	FSM	ENSG00000289287.1	ENST00000691947.1	1444	2	0	806	0	-4	multi-exon	FALSE	canonical	3	55	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAAGAACTCATGGGTT	NA	False	NA	-26	True	AATAAA	-14	NA	114606896	114595211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_114595599_114606645
transcript_205691.known	chrX	+	4743	6	FSM	ENSG00000147246.10	ENST00000276198.6	4743	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.1540659228538	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAATATGTCACATGTCTT	114583680	True	NA	2	True	ATTAAA	-15	NA	114584085	114910061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_114584660_114613814_114613882_114726857_114726972_114731293_114731608_114848002_114848204_114906588
transcript_205692.known	chrX	-	4953	21	FSM	ENSG00000130224.15	ENST00000317135.13	4953	21	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_13	4.23408785926792	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTCTGGTATTTCTTT	NA	False	NA	NA	False	GATAAA	-15	NA	115234096	115110615	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_115113336_115122526_115122605_115122759_115122898_115123079_115123193_115123944_115124003_115126842_115126894_115130154_115130200_115149826_115149944_115150021_115150071_115156601_115156668_115163675_115163784_115165404_115165464_115165557_115165656_115165840_115165953_115166254_115166343_115170298_115170433_115179426_115179564_115179645_115179752_115184410_115184538_115188225_115188371_115233692
transcript_205693.known	chrX	+	3459	1	FSM	ENSG00000175718.10	ENST00000424776.5	3459	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGAGTCTTAGTCTTCT	NA	False	NA	NA	False	NA	NA	NA	115189409	115192868	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_115189400_115192900
transcript_205695.known	chrX	+	3288	16	FSM	ENSG00000102024.19	ENST00000355899.8	3288	16	0	0	0	0	multi-exon	TRUE	canonical	3	933	junction_8	73.7697920711603	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTATCCAGTTCCTGC	115552978	True	NA	20	True	AGTAAA	-25	NA	115561173	115650861	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_115561261_115610242_115610324_115622245_115622410_115629197_115629328_115629834_115629968_115633999_115634082_115634880_115635047_115636835_115636979_115640407_115640504_115643312_115643509_115645020_115645100_115646071_115646187_115646401_115646536_115647549_115647674_115647892_115648018_115649428
transcript_2057.nnic	chr1	-	4244	13	NNC	ENSG00000162408.11	novel	6627	12	NA	NA	-46	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.1574783206527	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTAGTTGTGTAATTTT	-6546940	True	NA	-13	True	ATTAAA	-16	NA	6554559	6521349	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_6522619_6525044_6526004_6526695_6526830_6528993_6529172_6531967_6532080_6532462_6532761_6533279_6533442_6541829_6541928_6544825_6544923_6545044_6545181_6549570_6549699_6550395_6550616_6554106
transcript_20570.known	chr1	+	1428	6	FSM	ENSG00000173409.14	ENST00000310256.7	1428	6	0	0	0	0	multi-exon	TRUE	canonical	3	146	junction_3	12.0896650077659	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTCTCCCCTTTCCACTC	230976778	True	NA	NA	False	AATAAA	-18	NA	230979093	231000733	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_230979280_230988319_230988440_230990109_230990264_230995759_230995985_230997120_230997268_231000137
transcript_205701.nic	chrX	+	305	3	ISM	ENSG00000102024.19	ENST00000355899.8	3288	16	-6	28485	-6	-7540	5prime_fragment	FALSE	canonical	3	1004	junction_2	29.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGGGAAAATAAGTTTTGA	115552972	True	NA	NA	False	AATAAA	-1	NA	115561167	115622376	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_115561261_115610242_115610324_115622245
transcript_205703.known	chrX	+	280	2	FSM	ENSG00000229335.2	ENST00000415394.1	280	2	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTATGTGTTCTTATTA	115839462	True	NA	NA	False	NA	NA	NA	115841009	115843050	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_115841079_115842839
transcript_205704.known	chrX	+	444	3	FSM	ENSG00000229335.2	ENST00000451869.1	444	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	6.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTTATGTGTTCTTAT	115839416	True	NA	NA	False	NA	NA	NA	115840963	115843048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_115841079_115842643_115842764_115842839
transcript_205705.known	chrX	-	3396	8	FSM	ENSG00000003096.14	ENST00000540167.5	3396	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	22.2242742816709	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGGTCTGAGACATCCC	NA	False	NA	-20	True	AATAAA	-14	NA	118116865	117897813	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_117899396_117901832_117901947_117909300_117910097_117919520_117919718_117920237_117920371_117945433_117945576_118028423_118028498_118116507
transcript_205706.known	chrX	-	3322	7	FSM	ENSG00000003096.14	ENST00000545703.5	3322	7	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	8.47381587925744	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGGTCTGAGACATCCC	NA	False	NA	-20	True	AATAAA	-14	NA	118116865	117897813	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_117899396_117901832_117901947_117909300_117910097_117919520_117919718_117920237_117920371_117945433_117945576_118116507
transcript_205708.known	chrX	+	4114	20	FSM	ENSG00000131725.14	ENST00000254029.8	4114	20	0	0	0	0	multi-exon	FALSE	canonical	2	74	junction_4	23.606187272881	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGACTTTATTTTTAATTG	118344321	True	NA	30	True	ATTAAA	-40	NA	118346105	118449961	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_118346581_118378418_118378453_118387339_118387415_118392631_118393272_118394054_118394186_118395248_118395345_118396969_118397107_118398386_118398471_118404337_118404445_118406874_118407027_118409488_118409628_118410894_118410960_118432780_118432895_118436701_118436825_118441367_118441560_118442243_118442346_118442564_118442681_118443559_118443688_118444359_118444495_118448892
transcript_205712.known	chrX	+	1041	3	FSM	ENSG00000131725.14	ENST00000493448.1	1041	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	52	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAAGGAAAAGCGAAT	118344414	True	NA	NA	False	NA	NA	NA	118346198	118393215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_118346581_118387339_118387415_118392631
transcript_205713.known	chrX	+	3996	11	FSM	ENSG00000131724.11	ENST00000371666.8	3996	11	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_4	11.6034477634882	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAATGTTTTCCTTTGGT	118726530	True	NA	9	True	AATAAA	-21	NA	118727605	118794533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_118727727_118741016_118741157_118746953_118747093_118749657_118749779_118758054_118758243_118761137_118761290_118766529_118766578_118766843_118766977_118773878_118773976_118776426_118776512_118791761
transcript_205718.known	chrX	+	2197	4	FSM	ENSG00000174460.4	ENST00000310164.3	2197	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	3.29983164553722	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTTAATGTGTCTGTG	118823713	True	NA	8	True	AATAAA	-15	NA	118823823	118826968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_118824006_118824338_118824391_118824588_118824714_118825130
transcript_205719.known	chrX	+	1879	3	FSM	ENSG00000101856.10	ENST00000217971.8	1879	3	0	0	0	0	multi-exon	FALSE	canonical	3	1227	junction_1	25	669	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTGGTGACTTATTTAA	119214749	True	NA	16	True	AATAAA	-18	NA	119236284	119244466	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_119236692_119240308_119240465_119243150
transcript_205721.known	chrX	+	2507	5	FSM	ENSG00000077713.19	ENST00000217909.8	2507	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	7.92148975887743	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGTTGGTCATTTATT	119398301	True	NA	NA	False	ATTAAA	-21	NA	119399335	119454478	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_119399679_119406459_119406702_119410189_119410363_119452008_119452144_119452864
transcript_205725.known	chrX	+	896	4	FSM	ENSG00000077713.19	ENST00000493093.5	896	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	17.2046505340853	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAGATGGTTTGGCCAT	119398374	True	NA	NA	False	NA	NA	NA	119399408	119453182	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_119399679_119410189_119410363_119452008_119452144_119452864
transcript_205729.known	chrX	+	1307	4	FSM	ENSG00000005022.6	ENST00000317881.9	1307	4	0	0	0	0	multi-exon	FALSE	canonical	3	7057	junction_3	401.07300526906	2989	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTACATTTTTAATAAATG	119430985	True	NA	-32	True	AATAAA	-19	NA	119468443	119471396	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_119468627_119469660_119470148_119470372_119470514_119470900
transcript_20573.known	chr1	-	1503	2	FSM	ENSG00000182118.8	ENST00000366654.5	1503	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCATGTGTTATTTTAT	-231040102	True	NA	-2	True	GATAAA	-14	NA	231040254	231018957	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_231020127_231039920
transcript_205734.known	chrX	-	1874	2	FSM	ENSG00000224281.5	ENST00000446986.1	1874	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGTACTATTTTTGCA	NA	False	NA	-8	True	AATAAA	-13	NA	119468262	119466033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_119467751_119468105
transcript_205736.nnic	chrX	-	1227	8	NNC	ENSG00000018610.15	novel	2301	7	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27.3935788692406	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTTAACCTTCTTGTA	NA	False	NA	-9	True	ATTAAA	-17	NA	119565412	119538148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_119538460_119539536_119539790_119541327_119541421_119542504_119542595_119544352_119544492_119545462_119545505_119560267_119560386_119565231
transcript_205737.nnic	chrX	-	1286	8	NNC	ENSG00000018610.15	novel	2301	7	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27.3935788692406	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTTGTGTTAACCTTCTT	NA	False	NA	-12	True	ATTAAA	-14	NA	119565412	119538151	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_119538495_119539509_119539790_119541327_119541421_119542504_119542595_119544352_119544492_119545462_119545505_119560267_119560386_119565231
transcript_205739.known	chrX	-	2301	7	FSM	ENSG00000018610.15	ENST00000644802.2	2301	7	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_3	5.66911711723165	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTTAACCTTCTTGTA	NA	False	NA	-9	True	ATTAAA	-17	NA	119565409	119538148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_119539790_119541327_119541421_119542504_119542595_119544352_119544492_119545462_119545505_119560267_119560386_119565231
transcript_205745.known	chrX	-	3817	3	FSM	ENSG00000186416.18	ENST00000304449.8	3817	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	11.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGCGTGCTCATTTCCG	NA	False	NA	2	True	AATAAA	-23	NA	119606443	119588336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_119591310_119592382_119592514_119605730
transcript_205747.known	chrX	+	1381	5	FSM	ENSG00000077721.16	ENST00000625938.2	1381	5	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_3	138.409717866919	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAAGGGAGCATAGCATA	119569123	True	NA	NA	False	AATAAA	-40	NA	119574545	119584101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_119574756_119574900_119574982_119575374_119575401_119582587_119582677_119583126
transcript_205749.known	chrX	-	1617	11	FSM	ENSG00000125354.24	ENST00000489216.5	1617	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	87.7704392150341	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCACTAAGTCTAAAGGAGAA	NA	False	NA	NA	False	NA	NA	NA	119693370	119616715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_119616743_119625334_119625380_119629317_119629509_119633359_119633493_119637026_119637196_119640691_119640789_119649936_119650099_119652853_119653041_119663481_119663678_119675553_119675669_119693075
transcript_20575.known	chr1	-	1432	7	FSM	ENSG00000143633.13	ENST00000366651.7	1432	7	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_5	28.4648906549806	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCTGTGACTGTTAAGT	-231239816	True	NA	-3	True	AATAAA	-17	NA	231241178	231223762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_231224415_231225470_231225524_231226738_231226826_231226972_231227069_231229149_231229207_231238856_231239189_231241023
transcript_205752.known	chrX	-	4495	11	FSM	ENSG00000125354.24	ENST00000394610.7	4495	11	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	46.6801885171857	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTGTGGTGTTCTTAA	NA	False	NA	-4	True	ATTAAA	-16	NA	119693168	119616944	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_119620052_119625334_119625380_119629317_119629509_119633359_119633493_119637026_119637196_119640691_119640789_119649936_119650099_119652853_119653041_119663481_119663678_119675553_119675669_119693075
transcript_205755.known	chrX	-	1576	10	FSM	ENSG00000125354.24	ENST00000354228.8	1576	10	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_1	84.1917271089045	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGTCTAAAGGAGAAGACT	NA	False	NA	NA	False	NA	NA	NA	119693370	119616711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_119616743_119629317_119629509_119633359_119633493_119637026_119637196_119640691_119640789_119649936_119650099_119652853_119653041_119663481_119663678_119675553_119675669_119693075
transcript_205757.known	chrX	-	2693	10	FSM	ENSG00000125354.24	ENST00000343984.5	2693	10	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	79.6596153705731	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACGAGGTCTTTTGATGTT	NA	False	NA	NA	False	NA	NA	NA	119693370	119617638	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_119618787_119629317_119629509_119633359_119633493_119637026_119637196_119640691_119640789_119649936_119650099_119652853_119653041_119663481_119663678_119675553_119675669_119693075
transcript_205758.known	chrX	-	4652	10	FSM	ENSG00000125354.24	ENST00000354416.7	4652	10	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	81.7720408615724	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTGTGGTGTTCTTAA	NA	False	NA	-4	True	ATTAAA	-16	NA	119693370	119616944	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_119620052_119629317_119629509_119633359_119633493_119637026_119637196_119640691_119640789_119649936_119650099_119652853_119653041_119663481_119663678_119675553_119675669_119693075
transcript_20576.known	chr1	-	1430	7	FSM	ENSG00000143633.13	ENST00000366649.7	1430	7	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_5	31.0559530882925	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCCTGTGACTGTTAA	-231239813	True	NA	-5	True	AATAAA	-15	NA	231241175	231223764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_231224415_231225470_231225524_231226738_231226826_231226972_231227069_231229149_231229210_231238856_231239189_231241023
transcript_205767.known	chrX	+	1615	1	FSM	ENSG00000187808.5	ENST00000343905.5	1615	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCTGTCCTTTCAGTGT	119758552	True	NA	8	True	ATTAAA	-27	NA	119758587	119760202	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_119758600_119760200
transcript_205768.known	chrX	-	390	3	FSM	ENSG00000198918.8	ENST00000361575.4	390	3	0	0	0	0	multi-exon	FALSE	canonical	3	9679	junction_2	667	2139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGTTGTATTGTGGTTT	NA	False	NA	-9	True	AATAAA	-23	NA	119791630	119786503	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_119786733_119789907_119790012_119791573
transcript_205769.known	chrX	-	2343	11	FSM	ENSG00000125351.13	ENST00000276201.7	2343	11	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	84.8693702109306	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAGTGTGTTTATTAACT	NA	False	NA	-2	True	AATAAA	-24	NA	119852963	119834021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_119835028_119837756_119838052_119838366_119838528_119840645_119840685_119841075_119841259_119841734_119841779_119843190_119843302_119845197_119845297_119851494_119851602_119851766_119851874_119852772
transcript_20577.nic	chr1	-	718	5	ISM	ENSG00000143633.13	ENST00000366651.7	1432	7	-19	3004	-10	-381	5prime_fragment	FALSE	canonical	3	94	junction_3	34.3256463886698	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGCAGCAAAGGAAGAAGAAA	-231241185	False	NA	NA	False	ATTAAA	-9	NA	231241197	231226766	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_231226826_231226972_231227069_231229149_231229207_231238856_231239189_231241023
transcript_205770.known	chrX	-	2335	10	FSM	ENSG00000125351.13	ENST00000345865.6	2335	10	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_5	30.0185128064518	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCTAAGTGTGTTTATT	NA	False	NA	-6	True	AATAAA	-20	NA	119852998	119834025	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_119835028_119837756_119838052_119838366_119838528_119841075_119841259_119841734_119841779_119843190_119843302_119845197_119845297_119851494_119851602_119851766_119851874_119852772
transcript_205773.nic	chrX	-	1289	9	ISM	ENSG00000125351.13	ENST00000345865.6	2335	10	-3	3778	-3	462	5prime_fragment	FALSE	canonical	3	206	junction_4	31.6027589776589	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTGAAAAGAAAGAAGAAGTG	NA	False	NA	NA	False	NA	NA	NA	119853001	119837803	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_119838052_119838366_119838528_119841075_119841259_119841734_119841779_119843190_119843302_119845197_119845297_119851494_119851602_119851766_119851874_119852772
transcript_205776.nic	chrX	-	931	8	ISM	ENSG00000125351.13	ENST00000345865.6	2335	10	-33	4481	-33	-241	5prime_fragment	FALSE	canonical	3	206	junction_3	29.749978562846	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAGATGAAAAAGAATTGGA	NA	False	NA	-119	True	AATAAA	-44	NA	119853031	119838506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_119838528_119841075_119841259_119841734_119841779_119843190_119843302_119845197_119845297_119851494_119851602_119851766_119851874_119852772
transcript_205778.nic	chrX	-	909	7	ISM	ENSG00000125351.13	ENST00000345865.6	2335	10	-32	7050	-32	-2810	5prime_fragment	FALSE	canonical	3	206	junction_2	31.0559530882925	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATAAGAATGTTGAAACTG	NA	False	NA	1	True	ATTAAA	-20	NA	119853030	119841075	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_119841259_119841734_119841779_119843190_119843302_119845197_119845297_119851494_119851602_119851766_119851874_119852772
transcript_205779.nic	chrX	-	887	7	ISM	ENSG00000125351.13	ENST00000345865.6	2335	10	-87	7127	-87	-2887	5prime_fragment	FALSE	canonical	3	206	junction_2	31.0559530882925	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAGATATAGAAAAGCTA	NA	False	NA	15	True	NA	NA	NA	119853085	119841152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_119841259_119841734_119841779_119843190_119843302_119845197_119845297_119851494_119851602_119851766_119851874_119852772
transcript_205780.nic	chrX	-	772	7	ISM	ENSG00000125351.13	ENST00000345865.6	2335	10	-23	7178	-23	-2938	5prime_fragment	FALSE	canonical	3	206	junction_2	31.0559530882925	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAAAGAGAAGAAGAGAGG	NA	False	NA	-36	True	AATAGA	-9	NA	119853021	119841203	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_119841259_119841734_119841779_119843190_119843302_119845197_119845297_119851494_119851602_119851766_119851874_119852772
transcript_205783.nic	chrX	-	727	6	ISM	ENSG00000125351.13	ENST00000345865.6	2335	10	-33	7709	-33	-3469	5prime_fragment	FALSE	canonical	3	206	junction_1	28.8402496521788	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATCTTTTGTCTTTATA	NA	False	NA	NA	False	AAAAAG	-37	NA	119853031	119841734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_119841779_119843190_119843302_119845197_119845297_119851494_119851602_119851766_119851874_119852772
transcript_205785.nic	chrX	-	669	5	ISM	ENSG00000125351.13	ENST00000345865.6	2335	10	-33	9179	-33	-4939	5prime_fragment	FALSE	canonical	3	247	junction_1	16.8300326797068	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAGAATTAATAGGTAAGT	NA	False	NA	NA	False	AATAGA	-10	NA	119853031	119843204	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_119843302_119845197_119845297_119851494_119851602_119851766_119851874_119852772
transcript_20579.known	chr1	-	2657	2	FSM	ENSG00000143633.13	ENST00000471936.1	2657	2	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTTTCTTCAAATGTCT	-231239825	True	NA	NA	False	CATAAA	-17	NA	231241187	231236695	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_231239189_231241023
transcript_205790.known	chrX	+	2006	2	FSM	ENSG00000286366.1	ENST00000654639.1	2006	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATCATTGCCTACAAAAG	119791867	True	NA	NA	False	AATAAA	-14	NA	119791970	119810949	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_119792018_119808990
transcript_205791.known	chrX	-	1259	1	FSM	ENSG00000125352.6	ENST00000371442.4	1259	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGGTCCTGGATTAAAAGC	NA	False	NA	52	True	NA	NA	NA	119871733	119870474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_119870500_119871700
transcript_205794.known	chrX	+	421	3	FSM	ENSG00000125356.7	ENST00000371437.5	421	3	0	0	0	0	multi-exon	FALSE	canonical	3	3633	junction_2	17.5	515	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTCTTTTTTTTAAAT	119860616	True	NA	6	True	AATAAA	-17	NA	119871831	119876662	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_119872014_119873303_119873394_119876513
transcript_205795.known	chrX	-	1394	9	FSM	ENSG00000101882.10	ENST00000652253.1	1394	9	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_6	59.0591599584688	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTATTGATATAACTTTA	NA	False	NA	-20	True	AATAAA	-5	NA	119943604	119925069	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_119925395_119930015_119930166_119931935_119932012_119932106_119932217_119934493_119934558_119936296_119936429_119936611_119936683_119938729_119938811_119943219
transcript_205796.nic	chrX	-	913	5	ISM	ENSG00000101882.10	ENST00000371410.5	5942	9	-38	13830	-38	-4377	5prime_fragment	FALSE	canonical	3	130	junction_3	13.7727085208393	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGATCGTCAGTTTTTTA	NA	False	NA	-9	True	AAAAAG	-16	NA	119943789	119934501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_119934558_119936296_119936432_119936611_119936683_119938729_119938811_119943219
transcript_205798.nic	chrX	-	784	4	ISM	ENSG00000101882.10	ENST00000371410.5	5942	9	-38	15698	-38	-6245	5prime_fragment	FALSE	canonical	3	130	junction_2	12.7540843131393	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCATCGAAAAGAAAACATAA	NA	False	NA	NA	False	AAGAAA	-27	NA	119943789	119936369	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_119936432_119936611_119936683_119938729_119938811_119943219
transcript_205799.known	chrX	+	412	3	FSM	ENSG00000186471.13	ENST00000371422.5	412	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAAAGTTTGAAGTCTGG	119896133	True	NA	3	True	AATAAA	-15	NA	119896192	119903652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_119896268_119903213_119903393_119903494
transcript_20580.known	chr1	+	2685	17	FSM	ENSG00000116906.13	ENST00000644483.1	2685	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	141.673425083888	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTAGCTTGCTTTAATT	231235902	True	NA	48	True	ATTAAA	-28	NA	231241215	231277933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_231241457_231250960_231251144_231258221_231258310_231260506_231260684_231262722_231262853_231265292_231265421_231265711_231265788_231266013_231266166_231266276_231266408_231267679_231267904_231270757_231271001_231272311_231272392_231273921_231274063_231275220_231275321_231275404_231275499_231276134_231276197_231277498
transcript_205800.nic	chrX	-	721	3	ISM	ENSG00000101882.10	ENST00000652253.1	1394	9	-185	11543	-38	-6488	5prime_fragment	FALSE	canonical	3	130	junction_1	1	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTATTTTTAAAAAAAGGGT	NA	False	NA	-1	True	AAGAAA	-28	NA	119943789	119936612	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_119936683_119938729_119938811_119943219
transcript_205801.nnic	chrX	+	1549	3	FSM	ENSG00000258545.7	ENST00000687648.1	1536	3	-14	1	-14	0	multi-exon	FALSE	canonical	3	52	junction_2	2	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTCTCTCTGATTCCTT	120139809	True	NA	17	True	AATAAA	-17	NA	120140695	120146854	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_120140850_120143722_120143901_120145637
transcript_205803.known	chrX	-	2384	3	FSM	ENSG00000233382.8	ENST00000452254.3	2424	3	40	0	10	0	multi-exon	FALSE	canonical	3	10	junction_1	6	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGGTGCACTGACTT	NA	False	NA	NA	False	AATAAA	-14	NA	120245233	120236457	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_120238243_120240226_120240356_120244763
transcript_205806.known	chrX	+	5253	3	FSM	ENSG00000177485.7	ENST00000557385.2	5253	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	6	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGAGTGCGTGTTTTAC	120248491	True	NA	9	True	AATAAA	-16	NA	120250811	120258398	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_120250978_120252668_120252771_120253413
transcript_205808.known	chrX	+	5211	2	FSM	ENSG00000177485.7	ENST00000326624.2	5211	2	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGAGTGCGTGTTTTAC	120250620	False	NA	9	True	AATAAA	-16	NA	120250751	120258398	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_120250978_120253413
transcript_205810.known	chrX	-	6535	9	FSM	ENSG00000005893.16	ENST00000200639.9	6535	9	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_1	81.2757651455832	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGGATAACCTCATTTTT	NA	False	NA	-6	True	AATAAA	-20	NA	120469296	120426147	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_120431463_120441729_120441895_120442598_120442663_120446304_120446428_120447840_120448026_120448969_120449129_120455356_120455571_120456650_120456770_120469105
transcript_205812.known	chrX	-	4030	9	FSM	ENSG00000005893.16	ENST00000371335.4	4030	9	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_1	102.232272301852	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTACCTTTTTTCCCG	NA	False	NA	0	True	AATAAA	-24	NA	120469306	120436493	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_120439294_120441729_120441895_120442598_120442663_120446304_120446428_120447840_120448026_120448969_120449129_120455356_120455571_120456650_120456770_120469105
transcript_205816.known	chrX	-	4906	21	FSM	ENSG00000158290.19	ENST00000336592.11	4906	21	0	0	0	0	multi-exon	FALSE	non_canonical	3	52	junction_20	30.010164944565	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTAGAGAAGATCTTTA	NA	False	NA	-10	True	AATAAA	-18	NA	120561453	120524611	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_120526857_120530101_120530255_120532421_120532595_120534480_120534587_120535829_120535944_120536926_120537035_120538123_120538210_120538659_120538771_120539267_120539373_120540369_120540563_120541601_120541721_120542965_120543034_120543726_120543810_120544113_120544204_120544480_120544644_120545443_120545518_120546546_120546617_120547135_120547240_120557923_120558040_120560082_120560626_120561371
transcript_205818.known	chrX	-	4418	20	FSM	ENSG00000158290.19	ENST00000371323.3	4418	20	0	0	0	0	multi-exon	FALSE	non_canonical	3	23	junction_19	35.8554345722605	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTAGAGAAGATCTTTA	NA	False	NA	-10	True	AATAAA	-18	NA	120559915	120524611	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_120526857_120530101_120530255_120532421_120532595_120534480_120534587_120535829_120535944_120536926_120537035_120538123_120538210_120538659_120538771_120539267_120539373_120540369_120540563_120541601_120541721_120542965_120543034_120543726_120543810_120544113_120544204_120544480_120544644_120545443_120545518_120546546_120546617_120547135_120547240_120557923_120558040_120559778
transcript_205819.known	chrX	-	5097	20	FSM	ENSG00000158290.19	ENST00000674137.11	5097	20	0	0	0	0	multi-exon	FALSE	non_canonical	3	12	junction_6	36.5324581518266	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTTCCCTGTGTACGTG	NA	False	NA	-71	True	NA	NA	NA	120560953	120524672	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_120526857_120530101_120530255_120532421_120532595_120534480_120534587_120535829_120535944_120536926_120537035_120538117_120538210_120538659_120538771_120539267_120539373_120540369_120540563_120541601_120541721_120542965_120543034_120543726_120543810_120544113_120544204_120544480_120544644_120545443_120545518_120546546_120546617_120547135_120547240_120557923_120558040_120560082
transcript_205827.known	chrX	+	9577	6	FSM	ENSG00000232119.8	ENST00000371317.10	9577	6	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_3	19.4010309004444	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCACCTGTGTCTTTACTT	120600828	True	NA	NA	False	AATAAA	-19	NA	120604100	120621159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_120604248_120605406_120605560_120606078_120606177_120608224_120608359_120611010_120611079_120612182
transcript_20583.known	chr1	+	2641	16	FSM	ENSG00000116906.13	ENST00000366647.9	2641	16	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_8	40.1760569936319	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATTTGAAAGAGATATTT	231235898	True	NA	88	True	ATTAAA	-18	NA	231241211	231277973	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_231241457_231250960_231251144_231260506_231260684_231262722_231262853_231265292_231265421_231265711_231265788_231266013_231266166_231266276_231266408_231267679_231267904_231270757_231271001_231272311_231272392_231273921_231274063_231275220_231275321_231275404_231275499_231276134_231276197_231277498
transcript_205830.known	chrX	-	1636	2	FSM	ENSG00000171155.8	ENST00000304661.6	1636	2	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCCTGAGAAAAAAAACTGA	NA	False	NA	-19	True	ATTAAA	-18	NA	120630054	120625673	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_120627172_120629916
transcript_205841.known	chrX	+	644	3	FSM	ENSG00000125675.20	ENST00000479118.1	644	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	8	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATAGTAATTTTAGAACC	123183886	False	NA	59	True	AATAAA	-27	NA	123184559	123253702	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_123184645_123185831_123185991_123253302
transcript_205848.nic	chrX	-	4062	31	ISM	ENSG00000125676.20	ENST00000355725.8	4930	39	-38	11185	-38	92	5prime_fragment	FALSE	canonical	2	214	junction_10	25.2622027719059	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTCAAGAAGGAAGAAAAAGC	NA	False	NA	-3	True	AAGAAA	-3	NA	123733094	123621382	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_123621588_123622757_123622861_123623104_123623284_123623786_123623972_123624059_123624192_123624540_123624670_123625911_123626070_123626520_123626663_123627692_123627969_123631687_123631853_123632860_123633041_123633952_123634071_123636078_123636176_123638042_123638124_123638933_123639028_123640537_123640623_123644574_123644677_123644778_123644910_123645333_123645376_123665641_123665838_123667105_123667279_123668158_123668315_123671668_123671762_123686547_123686715_123696020_123696155_123696720_123696843_123697680_123697752_123703453_123703506_123706857_123706950_123712849_123712909_123732951
transcript_205850.nic	chrX	-	3922	31	ISM	ENSG00000125676.20	ENST00000355725.8	4930	39	-38	11325	-38	0	5prime_fragment	FALSE	canonical	2	214	junction_10	25.2622027719059	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTCCAGCTACTACTCCA	NA	False	NA	NA	False	AAAAAG	-31	NA	123733094	123621522	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_123621588_123622757_123622861_123623104_123623284_123623786_123623972_123624059_123624192_123624540_123624670_123625911_123626070_123626520_123626663_123627692_123627969_123631687_123631853_123632860_123633041_123633952_123634071_123636078_123636176_123638042_123638124_123638933_123639028_123640537_123640623_123644574_123644677_123644778_123644910_123645333_123645376_123665641_123665838_123667105_123667279_123668158_123668315_123671668_123671762_123686547_123686715_123696020_123696155_123696720_123696843_123697680_123697752_123703453_123703506_123706857_123706950_123712849_123712909_123732951
transcript_205855.nic	chrX	-	3857	30	ISM	ENSG00000125676.20	ENST00000355725.8	4930	39	-38	12560	-38	755	5prime_fragment	FALSE	canonical	2	214	junction_9	24.9469830230042	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGAACACTGTGCCATGT	NA	False	NA	NA	False	NA	NA	NA	123733094	123622757	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_123622861_123623104_123623284_123623786_123623972_123624059_123624192_123624540_123624670_123625911_123626070_123626520_123626663_123627692_123627969_123631687_123631853_123632860_123633041_123633952_123634071_123636078_123636176_123638042_123638124_123638933_123639028_123640537_123640623_123644574_123644677_123644778_123644910_123645333_123645376_123665641_123665838_123667105_123667279_123668158_123668315_123671668_123671762_123686547_123686715_123696020_123696155_123696720_123696843_123697680_123697752_123703453_123703506_123706857_123706950_123712849_123712909_123732951
transcript_205863.nic	chrX	-	2829	23	ISM	ENSG00000125676.20	ENST00000355725.8	4930	39	-38	17495	-38	-4180	5prime_fragment	FALSE	canonical	2	214	junction_2	24.8566551608442	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTTTTTGTTCTAGTAG	NA	False	NA	-1	True	AATAAA	-43	NA	123733094	123627692	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_123627969_123631687_123631853_123632860_123633041_123633952_123634071_123636078_123636176_123638042_123638124_123638933_123639028_123640537_123640623_123644574_123644677_123644778_123644910_123645333_123645376_123665641_123665838_123667105_123667279_123668158_123668315_123671668_123671762_123686547_123686715_123696020_123696155_123696720_123696843_123697680_123697752_123703453_123703506_123706857_123706950_123712849_123712909_123732951
transcript_205874.nic	chrX	-	1912	17	ISM	ENSG00000125676.20	ENST00000355725.8	4930	39	-38	28736	-38	-15421	5prime_fragment	FALSE	canonical	3	238	junction_10	23.5344660816854	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCCTTTCAAGTGAAGTA	NA	False	NA	NA	False	NA	NA	NA	123733094	123638933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_123639028_123640537_123640623_123644574_123644677_123644778_123644910_123645333_123645376_123665641_123665838_123667105_123667279_123668158_123668315_123671668_123671762_123686547_123686715_123696020_123696155_123696720_123696843_123697680_123697752_123703453_123703506_123706857_123706950_123712849_123712909_123732951
transcript_205879.known	chrX	-	876	10	FSM	ENSG00000125676.20	ENST00000433883.1	876	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	91.8706820602864	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGCTGATAATTGCATTATG	NA	False	NA	-108	True	NA	NA	NA	123733037	123668307	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_123668315_123671668_123671762_123686547_123686715_123696020_123696155_123696720_123696836_123697680_123697752_123703453_123703506_123706857_123706950_123712849_123712909_123732951
transcript_205883.known	chrX	+	8558	7	FSM	ENSG00000101966.13	ENST00000371199.8	8558	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	0.763762615825973	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATACTACCTTGTATTT	123859997	False	NA	NA	False	AATAAA	-34	NA	123860052	123913972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_123860294_123885630_123886540_123888618_123888719_123891237_123891317_123892730_123892774_123900492_123900694_123906987
transcript_205886.known	chrX	+	598	6	FSM	ENSG00000101966.13	ENST00000481776.5	598	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.56070170039655	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGGAGAAGCTTTGCAAA	123859745	False	NA	NA	False	NA	NA	NA	123859763	123907020	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_123859906_123888618_123888719_123891237_123891317_123892730_123892774_123900492_123900694_123906987
transcript_205894.known	chrX	+	4281	34	FSM	ENSG00000101972.20	ENST00000371144.7	4281	34	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	67.6676369537838	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACAATCTGAAGAGGCAT	123958377	True	NA	NA	False	TTTAAA	-17	NA	123961738	124100902	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_123961857_124021366_124021432_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163_124045369_124047353_124047506_124049004_124049079_124050185_124050310_124051120_124051220_124051314_124051395_124056127_124056236_124057865_124057978_124061223_124061342_124061770_124061875_124062901_124062995_124063115_124063206_124063847_124064052_124065875_124065947_124066174_124066263_124066355_124066437_124068563_124068657_124071148_124071324_124076331_124076472_124077956_124078059_124081379_124081529_124083420_124083550_124086546_124086771_124090574_124090765_124094017_124094145_124095371_124095450_124100573
transcript_205898.known	chrX	+	5991	33	FSM	ENSG00000101972.20	ENST00000371157.7	5991	33	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	50.8247217773988	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATCCCTAATTGGATTA	123958356	True	NA	NA	False	AATAAA	-22	NA	123961717	124102656	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_123961857_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163_124045369_124047353_124047506_124049004_124049079_124050185_124050310_124051120_124051220_124051314_124051395_124056127_124056236_124057865_124057978_124061223_124061342_124061770_124061875_124062901_124062995_124063115_124063206_124063847_124064052_124065875_124065947_124066174_124066263_124066355_124066437_124068563_124068657_124071148_124071324_124076331_124076472_124077956_124078059_124081379_124081529_124083420_124083550_124086546_124086771_124090574_124090765_124094017_124094145_124095371_124095450_124100573
transcript_205924.known	chrX	+	6179	35	FSM	ENSG00000101972.20	ENST00000371145.8	6179	35	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	74.5517922197944	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATCCCTAATTGGATTA	123958344	True	NA	NA	False	AATAAA	-22	NA	123961705	124102656	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_123961857_124021366_124021432_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163_124045369_124047353_124047506_124049004_124049079_124050185_124050310_124051120_124051220_124051314_124051395_124056127_124056236_124057865_124057978_124061223_124061342_124061770_124061875_124062901_124062995_124063115_124063206_124063847_124064052_124065875_124065947_124066174_124066263_124066355_124066437_124068563_124068657_124071148_124071324_124076331_124076472_124077956_124078059_124081379_124081529_124083420_124083550_124086546_124086771_124090574_124090765_124090853_124090965_124094017_124094145_124095371_124095450_124100573
transcript_205926.known	chrX	+	2089	17	FSM	ENSG00000101972.20	ENST00000455404.5	2089	17	0	0	0	0	multi-exon	FALSE	canonical	2	32	junction_1	60.1297750182886	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGCAAAGGAGAAGAAGAC	NA	False	NA	-29	True	AATAAA	-32	NA	123960518	124062907	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_123960867_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163_124045369_124047353_124047506_124049004_124049079_124050185_124050310_124051120_124051220_124051314_124051395_124056127_124056236_124057865_124057978_124061223_124061342_124061770_124061875_124062901
transcript_205927.known	chrX	+	5218	35	FSM	ENSG00000101972.20	ENST00000218089.13	5218	35	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	75.4725195754896	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGCTGATTTTATAATT	NA	False	NA	100	True	AATAAA	-19	NA	123960518	124101498	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_123960867_124021366_124021432_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163_124045369_124047353_124047506_124049004_124049079_124050185_124050310_124051120_124051220_124051314_124051395_124056127_124056236_124057865_124057978_124061223_124061342_124061770_124061875_124062901_124062995_124063115_124063206_124063847_124064052_124065875_124065947_124066174_124066263_124066355_124066437_124068563_124068657_124071148_124071324_124076331_124076472_124077956_124078059_124081379_124081529_124083420_124083550_124086546_124086771_124090574_124090765_124090853_124090965_124094017_124094145_124095371_124095450_124100573
transcript_205936.known	chrX	+	742	7	FSM	ENSG00000101972.20	ENST00000435103.5	742	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	101.391567696727	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACTTACTACCTTAAGTG	123961117	True	NA	NA	False	NA	NA	NA	123961317	124042645	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_123961436_124021366_124021432_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568
transcript_205940.nic	chrX	+	372	3	ISM	ENSG00000101972.20	ENST00000458176.5	845	8	-37	19293	-4	0	5prime_fragment	FALSE	canonical	3	106	junction_1	72.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTATGTATCAAATATTT	123958340	True	NA	NA	False	NA	NA	NA	123961701	124025915	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_123961857_124022530_124022672_124025839
transcript_205942.known	chrX	-	2791	1	FSM	ENSG00000198354.7	ENST00000360028.4	2791	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTGGCAGACTTAAGTT	NA	False	NA	2	True	AATAAA	-26	NA	126166289	126163498	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_126163500_126166300
transcript_205943.known	chrX	-	3345	2	FSM	ENSG00000198889.5	ENST00000371126.3	3345	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGAATCCTGTTGTGTTT	NA	False	NA	NA	False	AATAAA	-26	NA	126552814	126549382	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_126551108_126551194
transcript_205944.known	chrX	-	3989	25	FSM	ENSG00000102038.16	ENST00000371121.5	3989	25	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_13	67.3621921448193	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTATTTCCTGTTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	129523490	129446505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_129447234_129448332_129448444_129465519_129465733_129465843_129465963_129468772_129468906_129471203_129471327_129480700_129480815_129481074_129481186_129487017_129487138_129488936_129489086_129490059_129490193_129491940_129492094_129493039_129493076_129496749_129496872_129497844_129498072_129499731_129499842_129504733_129504803_129506079_129506212_129507940_129508097_129511803_129511984_129515686_129515788_129515893_129515995_129516330_129516498_129518360_129518448_129523196
transcript_205948.known	chrX	-	3948	24	FSM	ENSG00000102038.16	ENST00000371123.5	3948	24	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_12	95.2852646714909	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTATTTCCTGTTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	129523485	129446505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_129447234_129448332_129448444_129465519_129465733_129465843_129465963_129468772_129468906_129471203_129471327_129480700_129480815_129481074_129481186_129487017_129487138_129488936_129489086_129490059_129490193_129491940_129492094_129496749_129496872_129497844_129498072_129499731_129499842_129504733_129504803_129506079_129506212_129507940_129508097_129511803_129511984_129515686_129515788_129515893_129515995_129516330_129516498_129518360_129518448_129523196
transcript_20595.nic	chr1	+	2291	15	NIC	ENSG00000116906.13	novel	2641	16	NA	NA	-4	-136	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	108.67365957634	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAGCTCAGCTCATTTCA	231235889	True	NA	24	True	AATAAA	-24	NA	231241202	231277797	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_231241457_231260506_231260684_231262722_231262853_231265292_231265421_231265711_231265788_231266013_231266166_231266276_231266408_231267679_231267904_231270757_231271001_231272311_231272392_231273921_231274063_231275220_231275321_231275404_231275499_231276134_231276197_231277498
transcript_205959.nic	chrX	-	1555	10	ISM	ENSG00000102038.16	ENST00000371122.8	4099	25	-193	53272	-193	8278	5prime_fragment	FALSE	canonical	3	469	junction_5	30.7105161543914	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATAAAGATTTACTTGG	NA	False	NA	NA	False	TATAAA	-34	NA	129523693	129499776	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_129499842_129504733_129504803_129506079_129506212_129507940_129508097_129511803_129511984_129515686_129515788_129515893_129515995_129516330_129516498_129518360_129518448_129523196
transcript_205961.nic	chrX	-	415	2	ISM	ENSG00000102038.16	ENST00000478420.1	561	6	-309	10337	-55	-10337	5prime_fragment	FALSE	canonical	3	477	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATGGACCCAGAATATG	NA	False	NA	-25	True	NA	NA	NA	129523555	129518391	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_129518448_129523196
transcript_205962.known	chrX	+	5173	24	FSM	ENSG00000122126.18	ENST00000371113.9	5173	24	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	19.3824311927425	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGTGTGATTTTGGTGA	129538746	True	NA	16	True	AATAAA	-19	NA	129540258	129592556	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_129540479_129540743_129540824_129544957_129545038_129548562_129548602_129557324_129557436_129557860_129557951_129558632_129558754_129558839_129559002_129560549_129560652_129561178_129561294_129562383_129562501_129562598_129562787_129565771_129565884_129567253_129567364_129569263_129569400_129575139_129575251_129575896_129576063_129576316_129576553_129584343_129584368_129587001_129587119_129588178_129588264_129588885_129589014_129589844_129589957_129590145
transcript_205963.known	chrX	+	5138	23	FSM	ENSG00000122126.18	ENST00000357121.5	5138	23	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	17.9706487049309	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGATTTTGGTGAGGAAG	129538762	True	NA	21	True	AATAAA	-24	NA	129540274	129592561	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_129540479_129540743_129540824_129544957_129545038_129548562_129548602_129557324_129557436_129557860_129557951_129558632_129558754_129558839_129559002_129560549_129560652_129561178_129561294_129562383_129562501_129562598_129562787_129565771_129565884_129567253_129567364_129569263_129569400_129575139_129575251_129575896_129576063_129576316_129576553_129587001_129587119_129588178_129588264_129588885_129589014_129589844_129589957_129590145
transcript_205969.known	chrX	-	3224	3	FSM	ENSG00000171388.12	ENST00000429967.3	3224	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	2	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCCCATCTGTCTCAT	NA	False	NA	NA	False	AATAAA	-21	NA	129654956	129645258	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_129647918_129648620_129648793_129654563
transcript_205974.known	chrX	-	4571	11	FSM	ENSG00000188706.13	ENST00000357166.11	4571	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	49.944869606397	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGCCTCATTTCTTTAC	NA	False	NA	-18	True	AATACA	-21	NA	129843886	129803287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_129806487_129810904_129811002_129811405_129811510_129812717_129812821_129813676_129813726_129814657_129814796_129823678_129823838_129828980_129829142_129841778_129842081_129843258_129843327_129843695
transcript_205977.nnic	chrX	-	2481	11	NNC	ENSG00000188706.13	novel	4571	11	NA	NA	182	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	65.1835101847085	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAACCAGTTCTTCCATT	NA	False	NA	NA	False	NA	NA	NA	129843704	129805328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_129806487_129810904_129811002_129811405_129811510_129812717_129812821_129813676_129813726_129814657_129814796_129823678_129823838_129828980_129829142_129841778_129842081_129843258_129843327_129843562
transcript_205981.known	chrX	-	2473	10	FSM	ENSG00000188706.13	ENST00000371064.7	2473	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	52.2170210175822	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAACCAGTTCTTCCATT	NA	False	NA	NA	False	NA	NA	NA	129843460	129805328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_129806487_129810904_129811002_129811405_129811510_129812717_129812821_129813676_129813726_129814657_129814796_129823678_129823838_129828980_129829142_129841778_129842081_129843258
transcript_205985.nnic	chrX	-	2543	9	NNC	ENSG00000188706.13	novel	2473	10	NA	NA	-157	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	52.4843726741589	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAACCAGTTCTTCCATT	NA	False	NA	NA	False	NA	NA	NA	129843617	129805328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_129806487_129810904_129811002_129811405_129811510_129813660_129813726_129814657_129814796_129823678_129823838_129828980_129829142_129841778_129842081_129843258
transcript_205992.known	chrX	+	2507	15	FSM	ENSG00000156697.13	ENST00000394422.8	2507	15	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_4	23.0780618505001	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTGGAGTATATGTTG	129902523	True	NA	6	True	AATAAA	-17	NA	129906163	129929752	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_129906237_129907366_129907443_129908059_129908131_129908669_129908735_129911007_129911151_129911765_129911922_129919174_129919295_129919394_129919490_129920456_129920581_129920674_129920753_129921193_129921588_129924794_129925196_129925918_129926113_129926239_129926340_129929335
transcript_205997.nic	chrX	+	862	8	ISM	ENSG00000156697.13	ENST00000394422.8	2507	15	-63	10263	-20	-3574	5prime_fragment	FALSE	canonical	3	131	junction_4	14.8296448826983	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGAGGCCCCTGTGAAC	129902460	True	NA	NA	False	AGTAAA	-3	NA	129906100	129919489	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_129906237_129907366_129907443_129908059_129908131_129908669_129908735_129911007_129911151_129911765_129911922_129919174_129919295_129919394
transcript_205999.known	chrX	+	7465	14	FSM	ENSG00000085185.16	ENST00000540052.6	7465	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	6.41650977036084	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTCAGGGCTTCTGTC	129982407	True	NA	8	True	AAAACA	-17	NA	129982634	130058071	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_129982763_130005187_130005318_130012577_130012669_130012949_130016214_130020984_130021151_130022896_130022978_130024989_130025380_130028634_130028862_130034454_130034677_130037366_130037534_130039136_130039283_130050716_130050795_130051859_130052017_130055853
transcript_206.nic	SIRV6	+	895	8	ISM	SIRV6A	SIRV605	1088	9	-137	543	-7	0	5prime_fragment	FALSE	canonical	0	0	junction_4	10126.6471796958	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTGAAAAAGTAATAGTGC	NA	False	NA	NA	False	NA	NA	NA	993	10788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724
transcript_206001.known	chrX	-	4145	9	FSM	ENSG00000102034.18	ENST00000335997.11	4145	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	2.27760839478607	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGCATAAAGGTGCTGCA	NA	False	NA	35	True	ATTAAA	-7	NA	130110716	130064873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_130067526_130069299_130069678_130071039_130071233_130071335_130071420_130072225_130072418_130074048_130074142_130074580_130074753_130081255_130081540_130110619
transcript_206005.known	chrX	-	2107	16	FSM	ENSG00000156709.15	ENST00000675240.1	2107	16	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	134.185675672016	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAGTGAAATAAATTCTGA	NA	False	NA	NA	False	NA	NA	NA	130165825	130129396	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_130129629_130129969_130130103_130131674_130131800_130133312_130133456_130136044_130136186_130136642_130136732_130137077_130137186_130138592_130138702_130139794_130139872_130140532_130140618_130145478_130145570_130147492_130147624_130147751_130147877_130149468_130149569_130156460_130156604_130165550
transcript_206007.known	chrX	-	2086	16	FSM	ENSG00000156709.15	ENST00000676328.1	2086	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	136.290702381181	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTCTGTTCTCTTGTCA	NA	False	NA	NA	False	AATAAA	-18	NA	130165712	130129365	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_130129629_130129969_130130167_130131674_130131800_130133312_130133456_130136044_130136186_130136642_130136732_130137077_130137186_130138592_130138702_130139794_130139869_130140532_130140618_130145478_130145570_130147492_130147624_130147751_130147877_130149468_130149569_130156460_130156604_130165550
transcript_206010.known	chrX	-	2154	16	FSM	ENSG00000156709.15	ENST00000675092.1	2154	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	134.894955016446	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTCTCTTGTCAAGGG	NA	False	NA	NA	False	AATAAA	-22	NA	130165746	130129361	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_130129629_130129969_130130194_130131674_130131800_130133312_130133456_130136044_130136186_130136642_130136732_130137077_130137186_130138592_130138702_130139794_130139872_130140532_130140618_130145478_130145570_130147492_130147624_130147751_130147877_130149468_130149569_130156460_130156604_130165550
transcript_206018.known	chrX	+	945	2	FSM	ENSG00000134594.5	ENST00000257017.5	945	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACATGGCTTTTTGTCTTG	130171902	False	NA	5	True	AATAAA	-15	NA	130171961	130184870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_130172321_130184284
transcript_206019.known	chrX	-	4638	19	FSM	ENSG00000056277.16	ENST00000370978.9	4638	19	0	0	0	0	multi-exon	TRUE	canonical	3	51	junction_8	10.5293534440922	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATATAACTATAGGAGCAT	NA	False	NA	-6	True	AATAAA	-20	NA	130268899	130202706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_130204993_130205116_130205154_130205296_130205416_130209652_130209716_130215192_130215334_130215790_130216102_130220348_130220481_130226758_130226906_130227681_130227783_130228976_130229135_130230509_130230728_130236213_130236321_130236468_130236640_130239581_130239694_130243562_130243700_130243799_130243866_130246858_130247006_130260418_130260466_130268761
transcript_206027.nic	chrX	+	1425	11	NIC	ENSG00000102078.16	novel	1615	11	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_4	22.7246562130211	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTTGGCTTTGTCTTCA	130338379	True	NA	27	True	ATTAAA	-17	NA	130339905	130373357	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_130339977_130345181_130345276_130346543_130346692_130349250_130349346_130349823_130349868_130350645_130350732_130358639_130358736_130364627_130364753_130365540_130365677_130371563_130371645_130372908
transcript_206029.known	chrX	+	1403	10	FSM	ENSG00000102078.16	ENST00000543953.5	1403	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	23.7580395749406	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTTTGTCTTCATTTA	130338361	True	NA	31	True	ATTAAA	-21	NA	130339887	130373361	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_130339977_130345181_130345276_130346543_130346692_130349250_130349346_130350645_130350732_130358639_130358736_130364627_130364753_130365540_130365677_130371563_130371645_130372908
transcript_206039.known	chrX	+	1823	6	FSM	ENSG00000134597.17	ENST00000305536.11	1823	6	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_5	21.9872690436989	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGGCCTTTTGTGTCTGG	130399194	True	NA	5	True	CATAAA	-16	NA	130401986	130413656	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_130402038_130402254_130402371_130403801_130403854_130409256_130409387_130411347_130411526_130412360
transcript_206040.nic	chrX	+	602	5	ISM	ENSG00000134597.17	ENST00000305536.11	1823	6	-76	2132	-76	0	5prime_fragment	FALSE	canonical	3	128	junction_3	18.7683243791235	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAAAGCATTAAGACTTAA	NA	False	NA	1	True	AAAAAG	-10	NA	130401910	130411524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_130402038_130402254_130402371_130403801_130403854_130409256_130409387_130411347
transcript_206042.known	chrX	+	729	4	FSM	ENSG00000134597.17	ENST00000469953.1	729	4	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_2	18.6726180988812	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAAAGCATTAAGACTTAA	130399208	True	NA	1	True	AAAAAG	-10	NA	130402000	130411524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_130402371_130403801_130403854_130409256_130409387_130411347
transcript_206043.known	chrX	-	5126	15	FSM	ENSG00000165675.19	ENST00000394363.6	5126	15	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	6.59506618307835	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATAAATGTGTGAGAAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	130903209	130622324	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_130625446_130627957_130628044_130631467_130631577_130634983_130635092_130637228_130637411_130656580_130656696_130665642_130665750_130667529_130667743_130669964_130670199_130679541_130679749_130688862_130689019_130703119_130703255_130783546_130783691_130901683_130901732_130903048
transcript_206049.known	chrX	-	1515	10	FSM	ENSG00000165675.19	ENST00000432489.5	1515	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_8	6.54896090146283	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGATAATTCTGTTTTC	NA	False	NA	NA	False	AATAGA	-36	NA	130903204	130656580	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_130656696_130665642_130665750_130667529_130667743_130669964_130670199_130679541_130679749_130688862_130689019_130703119_130703255_130783546_130783691_130901683_130901732_130903048
transcript_206054.known	chrX	-	4476	20	FSM	ENSG00000147255.19	ENST00000370903.8	4476	20	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_10	36.1753194818261	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGGCTGTGGTCTTCTAT	NA	False	NA	-2	True	AATAAA	-29	NA	131289306	131273505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_131273932_131274082_131274207_131274598_131274878_131274998_131275287_131275477_131275766_131275960_131276249_131276938_131277227_131277855_131278135_131278460_131278752_131279142_131279191_131279270_131279342_131281217_131281339_131281665_131281945_131282443_131282738_131282979_131283265_131285178_131285467_131285766_131286049_131286436_131286464_131286604_131286742_131289213
transcript_20606.nic	chr1	+	694	3	ISM	ENSG00000116906.13	ENST00000416000.1	1924	13	-26	14518	-17	-5341	5prime_fragment	FALSE	canonical	3	379	junction_2	16	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTCTTTTTCAACCCCT	231235876	True	NA	NA	False	AATAAA	-41	NA	231241189	231260750	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_231241457_231250960_231251144_231260506
transcript_206060.known	chrX	-	1820	5	FSM	ENSG00000147255.19	ENST00000370901.4	1820	5	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	12.3161479367536	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTAGTATAGCTTTTT	NA	False	NA	-7	True	AATAAA	-14	NA	131289286	131284165	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_131285467_131285766_131286049_131286436_131286464_131286604_131286742_131289213
transcript_206063.known	chrX	-	4443	21	FSM	ENSG00000147255.19	ENST00000651556.1	4443	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	36.0179122104544	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTCTGAATAAAAAGAGTA	NA	False	NA	-43	True	ATTAAA	-8	NA	131289463	131273546	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_131273932_131274082_131274207_131274598_131274878_131274998_131275287_131275477_131275766_131275960_131276249_131276938_131277227_131277855_131278135_131278460_131278752_131279142_131279176_131279270_131279342_131281217_131281339_131281665_131281945_131282443_131282738_131282979_131283265_131285178_131285467_131285766_131286049_131286436_131286464_131286604_131286742_131289213_131289276_131289409
transcript_20607.known	chr1	+	3223	5	FSM	ENSG00000010072.16	ENST00000295050.12	3223	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	7.17635004720366	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAATGTATATTATGTTC	231337393	True	NA	NA	False	AATAAA	-17	NA	231338292	231355023	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_231338605_231339768_231339869_231347796_231347926_231351303_231351572_231352609
transcript_206073.known	chrX	-	1805	4	FSM	ENSG00000213468.7	ENST00000650184.1	1805	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	60.1793615416079	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACAAATATATGGGAACTT	NA	False	NA	NA	False	AATAAA	-28	NA	131830604	131795049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_131796332_131804971_131805038_131825221_131825366_131830291
transcript_206075.known	chrX	-	1240	3	FSM	ENSG00000213468.7	ENST00000668308.1	1240	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	91	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGCGCTGTCTTGGCCTT	NA	False	NA	-12	True	NA	NA	NA	131830673	131793752	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_131794467_131825221_131825366_131830291
transcript_206076.nnic	chrX	-	1726	3	NIC	ENSG00000213468.7	novel	1805	4	NA	NA	-9	-280	combination_of_known_splicesites	FALSE	canonical	3	44	junction_1	87	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAAGGGAATGCTGATAA	NA	False	NA	NA	False	AAAAAG	-27	NA	131830871	131795329	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_131796332_131825221_131825366_131830291
transcript_206077.known	chrX	-	2173	2	FSM	ENSG00000213468.7	ENST00000657242.1	2173	2	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTTGTTTGTTTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	131830862	131823763	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_131825366_131830291
transcript_206080.known	chrX	+	3251	12	FSM	ENSG00000134602.16	ENST00000394334.7	3251	12	0	0	0	0	multi-exon	TRUE	canonical	3	382	junction_1	37.6100039443526	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAATGTTTGTTTTCCTTG	132016425	True	NA	31	True	AATAAA	-19	NA	132023301	132075943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_132023408_132023507_132023660_132054630_132054862_132063432_132063490_132068214_132068324_132068411_132068570_132069477_132069664_132071068_132071218_132072267_132072362_132072812_132072876_132072956_132073094_132074134
transcript_206081.nic	chrX	+	1501	11	ISM	ENSG00000134602.16	ENST00000394334.7	3251	12	-90	2881	-90	-1208	5prime_fragment	FALSE	canonical	3	382	junction_1	39.0788945595957	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGTGAAGAAACTAATTGAA	132016335	True	NA	NA	False	GATAAA	-2	NA	132023211	132073062	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_132023408_132023507_132023660_132054630_132054862_132063432_132063490_132068214_132068324_132068411_132068570_132069477_132069664_132071068_132071218_132072267_132072362_132072812_132072876_132072956
transcript_206082.known	chrX	+	3179	11	FSM	ENSG00000134602.16	ENST00000354719.10	3179	11	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_9	139.187643129697	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAATGTTTGTTTTCCTTG	132016425	True	NA	31	True	AATAAA	-19	NA	132023301	132075943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_132023408_132023507_132023660_132054630_132054862_132063432_132063490_132068214_132068324_132068411_132068570_132069477_132069664_132071068_132071218_132072267_132072362_132072965_132073094_132074134
transcript_206084.known	chrX	+	3017	11	FSM	ENSG00000134602.16	ENST00000394335.6	3017	11	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	138.344352974742	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAATGTTTGTTTTCCTTG	132016428	True	NA	31	True	AATAAA	-19	NA	132023304	132075943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_132023408_132023507_132023660_132063432_132063490_132068214_132068324_132068411_132068570_132069477_132069664_132071068_132071218_132072267_132072362_132072812_132072876_132072956_132073094_132074134
transcript_206087.nic	chrX	+	727	5	ISM	ENSG00000134602.16	ENST00000354719.10	3179	11	-90	7638	-90	-5965	5prime_fragment	TRUE	canonical	3	382	junction_1	48.4896896257338	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCACCGAGACATAAAAGGT	132016335	True	NA	NA	False	AAGAAA	-2	NA	132023211	132068305	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_132023408_132023507_132023660_132054630_132054862_132063432_132063490_132068214
transcript_206088.known	chrX	+	3771	3	FSM	ENSG00000232160.7	ENST00000441399.3	3771	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAGCAAATAATGTATGAA	132218075	True	NA	NA	False	CATAAA	-27	NA	132218208	132432862	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_132218838_132239619_132239712_132429812
transcript_206093.known	chrX	-	3896	4	FSM	ENSG00000123728.10	ENST00000342983.6	3896	4	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_3	18.0554700852678	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGGTTTCTTTAATTATT	NA	False	NA	-13	True	AATAAA	-21	NA	132218124	132203024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_132205588_132214133_132214447_132216995_132217807_132217915
transcript_206100.known	chrX	-	1818	3	ISM	ENSG00000171004.19	ENST00000370836.6	4441	4	2793	2207	27	-253	3prime_fragment	FALSE	canonical	3	18	junction_2	11	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGCTCAAAAAGGCCTGTA	NA	False	NA	NA	False	NA	NA	NA	132958602	132628222	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_132629094_132956807_132957327_132958174
transcript_206112.known	chrX	-	4959	9	FSM	ENSG00000076716.9	ENST00000370828.4	4959	9	0	0	0	0	multi-exon	FALSE	canonical	3	537	junction_4	96.480244091731	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAATTTCTGCTTCCCCT	NA	False	NA	-3	True	AATAAA	-21	NA	133415489	133300102	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_133303070_133303165_133303342_133304724_133304862_133305771_133305919_133306023_133306155_133311257_133311424_133324144_133324537_133339182_133339342_133414805
transcript_206113.known	chrX	-	2267	8	FSM	ENSG00000147257.16	ENST00000370818.8	2267	8	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_6	35.3466795484674	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTGGCCCTTTTTTTGC	NA	False	NA	-28	True	AATAAA	-16	NA	133985594	133535744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_133536294_133596439_133596600_133661729_133661851_133692368_133692495_133699894_133700029_133753481_133754177_133953049_133953212_133985274
transcript_206114.nnic	chrX	+	1660	3	NNC	ENSG00000203952.9	novel	1790	3	NA	NA	159	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	1.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATGCCTGTGGGTCTTAT	134236733	True	NA	11	True	AATAAA	-27	NA	134237205	134246207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_134237344_134238749_134238841_134244776
transcript_206115.known	chrX	+	1299	2	FSM	ENSG00000203952.9	ENST00000370809.4	1299	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTTAAAAAAATCCTTCCA	NA	False	NA	NA	False	NA	NA	NA	134237046	134245778	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_134237344_134244776
transcript_206119.known	chrX	+	4434	11	FSM	ENSG00000156531.18	ENST00000625464.2	4434	11	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_5	91.1276028434854	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTTGTCTTTTTTGTG	134366638	True	NA	15	True	AATAAA	-18	NA	134373311	134428791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_134373468_134377571_134377756_134378004_134378107_134393500_134393635_134393908_134393953_134413487_134413658_134413822_134413967_134415015_134415121_134417168_134417303_134425200_134425331_134425660
transcript_20612.known	chr1	+	3559	4	FSM	ENSG00000010072.16	ENST00000391858.8	3559	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	5.71547606649408	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTTTTTGACAATTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	231337103	231353132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_231338605_231339768_231339869_231347796_231347926_231351303
transcript_206120.known	chrX	+	4759	10	FSM	ENSG00000156531.18	ENST00000332070.7	4759	10	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_5	61.2553852507861	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTGTCTTTTTTG	134366638	True	NA	13	True	AATAAA	-16	NA	134373311	134428789	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_134373468_134377571_134377756_134378004_134378107_134393500_134393635_134393908_134393953_134413490_134413658_134413822_134413967_134415015_134415121_134417168_134417303_134425200
transcript_206124.known	chrX	+	1150	8	FSM	ENSG00000156531.18	ENST00000370800.4	1150	8	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_5	101.921137981024	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTTCTCTATGTAACTT	134366699	True	NA	NA	False	AATAAA	-21	NA	134373372	134415292	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_134373468_134377571_134377756_134378004_134378107_134393500_134393635_134393908_134393953_134413487_134413658_134413822_134413967_134415015
transcript_206126.nic	chrX	+	706	6	ISM	ENSG00000156531.18	ENST00000691812.1	3892	11	-35	15212	2	-1736	5prime_fragment	FALSE	canonical	3	173	junction_5	78.0820081708968	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCGCAAAGGAAGGCCAAGA	134366618	True	NA	26	True	AGTAAA	-8	NA	134373291	134413556	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_134373468_134377571_134377756_134378004_134378107_134393500_134393635_134393908_134393953_134413490
transcript_206127.nic	chrX	+	620	5	FSM	ENSG00000156531.18	ENST00000685047.1	3790	5	6	3164	4	-3164	multi-exon	FALSE	canonical	3	280	junction_4	50.8004675175337	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCACATAACTCCGAAGGT	134366620	True	NA	NA	False	AAGAAA	-2	NA	134373293	134393934	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_134373468_134377571_134377756_134378004_134378107_134393500_134393635_134393908
transcript_20613.known	chr1	+	603	2	FSM	ENSG00000010072.16	ENST00000492437.1	603	2	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAAAAAGGCTTCTAGGG	231337395	True	NA	NA	False	AGTAAA	-12	NA	231338294	231340061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_231338605_231339768
transcript_206130.known	chrX	+	1395	9	FSM	ENSG00000165704.15	ENST00000298556.8	1395	9	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_5	35.0158446278253	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTTTATGAATTCAATTT	134454409	True	NA	30	True	AATAAA	-16	NA	134460164	134500668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_134460339_134473358_134473466_134475180_134475365_134486464_134486531_134490187_134490206_134493507_134493591_134498389_134498437_134498607_134498685_134500029
transcript_206137.known	chrX	-	1078	11	FSM	ENSG00000156504.17	ENST00000493333.5	1078	11	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_10	43.9796543870004	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGCAGAGAACTTTGATCC	NA	False	NA	NA	False	CATAAA	-14	NA	134797187	134772078	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_134772284_134781820_134781918_134785885_134785948_134787471_134787534_134788729_134788832_134789084_134789140_134789222_134789267_134789579_134789637_134793814_134793894_134796107_134796356_134797120
transcript_206138.known	chrX	-	1059	11	FSM	ENSG00000156504.17	ENST00000611027.2	1059	11	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_10	45.5487650765638	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACATAAAATGTTTAGTGG	NA	False	NA	NA	False	NA	NA	NA	134797187	134772100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_134772284_134781820_134781918_134785885_134785951_134787471_134787534_134788729_134788832_134789084_134789140_134789222_134789267_134789579_134789637_134793814_134793894_134796107_134796356_134797120
transcript_20614.known	chr1	-	5100	1	FSM	ENSG00000116903.7	ENST00000366645.1	5100	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGTGATATTAAGATAT	-231336425	True	NA	-40	True	AATAAA	-25	NA	231337852	231332752	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_231332800_231337900
transcript_206146.nic	chrX	-	1508	10	NIC	ENSG00000156504.17	novel	1059	11	NA	NA	3	-63	combination_of_known_junctions	FALSE	canonical	3	38	junction_9	40.8849635797023	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCTTCAAGTACATTATT	NA	False	NA	-11	True	ATTAAA	-17	NA	134797229	134771636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_134772284_134781820_134781918_134785885_134785951_134787471_134787534_134788729_134788832_134789084_134789140_134789222_134789267_134793814_134793894_134796107_134796356_134797120
transcript_206149.known	chrX	+	2157	4	FSM	ENSG00000156500.16	ENST00000645288.1	2157	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0.816496580927726	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACATTGTTGCACCTCTT	134796205	True	NA	NA	False	NA	NA	NA	134796394	134810975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_134796448_134804100_134804247_134807539_134807709_134809186
transcript_20615.known	chr1	-	4335	5	FSM	ENSG00000135766.9	ENST00000366641.4	4335	5	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_3	9.06573218223437	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATGGTGGTTATTTCCA	-231421047	True	NA	-5	True	ATTAAA	-24	NA	231422287	231363755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_231366476_231367568_231367637_231370561_231370699_231373979_231374100_231420997
transcript_206152.known	chrX	+	2331	4	FSM	ENSG00000156500.16	ENST00000647516.1	2331	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.09120616516523	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATCTTGAACTAATAAAAAT	134796219	True	NA	NA	False	AATACA	-41	NA	134796408	134811150	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_134796461_134804100_134804247_134807539_134807709_134809186
transcript_206157.known	chrX	-	2348	6	FSM	ENSG00000101928.13	ENST00000370783.8	2348	6	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	33.956442687655	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTCACATTGATTTAAACA	NA	False	NA	-11	True	AATAAA	-18	NA	134915257	134887631	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_134889193_134891478_134891641_134896816_134897035_134899089_134899166_134899279_134899535_134915181
transcript_206158.known	chrX	+	1483	1	FSM	ENSG00000184785.6	ENST00000330288.6	1483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTGCATTTAGAATGAA	134990885	True	NA	NA	False	ATTAAA	-21	NA	134990990	134992473	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_134991000_134992500
transcript_206159.known	chrX	-	2030	1	FSM	ENSG00000212747.5	ENST00000391440.3	2030	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGAAGTTTTAGTCTT	NA	False	NA	-14	True	ATTAAA	-20	NA	135022542	135020512	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_135020500_135022500
transcript_206160.known	chrX	+	616	2	FSM	ENSG00000134590.14	ENST00000464369.1	616	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTCTCAATGAATATGGCA	135027988	False	NA	NA	False	AATAAA	-24	NA	135032381	135033546	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_135032576_135033124
transcript_206161.known	chrX	+	1192	1	FSM	ENSG00000134590.14	ENST00000257013.9	1192	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTCTCAATGAATATGGCA	135027961	True	NA	NA	False	AATAAA	-24	NA	135032354	135033546	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_135032400_135033500
transcript_206162.known	chrX	-	536	2	FSM	ENSG00000203950.7	ENST00000522309.1	536	2	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTCTGATGGGTGCC	NA	False	NA	NA	False	NA	NA	NA	135052141	135051057	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_135051369_135051916
transcript_206163.known	chrX	-	1204	1	FSM	ENSG00000203950.7	ENST00000370775.3	1204	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGTCTCAATGAATATGG	NA	False	NA	NA	False	AATAAA	-24	NA	135052135	135050931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_135050900_135052100
transcript_206165.known	chrX	-	2817	2	FSM	ENSG00000196972.9	ENST00000433425.4	2817	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGGCCTTCCGTGTCTG	NA	False	NA	NA	False	AATACA	-13	NA	135098712	135094984	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_135097122_135098032
transcript_206166.known	chrX	-	1728	5	FSM	ENSG00000169551.13	ENST00000344129.2	1728	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGACCTCTCTGTTGATT	NA	False	NA	NA	False	AATAAA	-17	NA	135171398	135156539	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_135157504_135158198_135158312_135160410_135160556_135169593_135169779_135171077
transcript_206176.known	chrX	+	4034	5	FSM	ENSG00000173275.13	ENST00000339249.5	4034	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	6.81909084849293	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTAATATTCTTTGTTA	135344020	True	NA	NA	False	AATATA	-28	NA	135344795	135363413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_135344836_135347018_135347473_135349109_135349315_135359891_135360006_135360192
transcript_206181.known	chrX	+	5230	2	FSM	ENSG00000178947.9	ENST00000417443.3	5230	2	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCCTCAAGCAGGGTGC	135421649	True	NA	8	True	ATTAAA	-19	NA	135421943	135428075	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_135422731_135423632
transcript_206187.known	chrX	+	3904	18	FSM	ENSG00000165359.16	ENST00000639893.2	3904	18	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_15	10.2963022891934	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATGCTGGATAAATTTCT	135519991	True	NA	17	True	AATAAA	-27	NA	135520659	135582510	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_135521104_135521240_135521319_135545422_135545573_135546379_135546470_135546701_135546886_135547136_135547266_135549641_135549806_135551993_135552147_135556167_135556301_135569336_135569432_135570435_135570547_135572814_135573034_135573938_135574063_135575083_135575227_135577192_135577428_135579787_135580163_135581049_135581144_135581527
transcript_206193.known	chrX	+	4755	17	FSM	ENSG00000198689.13	ENST00000370701.6	4755	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	35.2995551494633	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACAGTATTTGAGTCACA	NA	False	NA	17	True	ATTAAA	-26	NA	135985134	136047130	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_135985478_135985602_135985828_135994785_135994986_135998107_135998186_135998481_135998559_135998855_135998969_136002107_136002214_136010441_136010584_136012948_136013055_136013348_136013438_136016644_136016759_136022585_136022698_136024329_136024484_136030131_136030163_136033413_136033494_136040075_136040182_136044451
transcript_206197.known	chrX	+	4631	16	FSM	ENSG00000198689.13	ENST00000370698.7	4631	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	36.5954459826174	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATGGGTTGGCAAATTTT	135983873	True	NA	NA	False	AATAAA	-26	NA	135985426	136047269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_135985828_135994785_135994890_135998107_135998186_135998481_135998559_135998855_135998969_136002107_136002214_136010441_136010584_136012948_136013055_136013348_136013438_136016644_136016759_136022585_136022698_136024329_136024484_136030131_136030163_136033413_136033494_136040075_136040182_136044451
transcript_206198.known	chrX	+	4711	16	FSM	ENSG00000198689.13	ENST00000370695.8	4711	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	29.3572629665793	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTTAACTTATGGGTTGG	135983881	True	NA	NA	False	AATAAA	-18	NA	135985434	136047261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_135985828_135994785_135994986_135998107_135998186_135998481_135998559_135998855_135998969_136002107_136002214_136010441_136010584_136012948_136013055_136013348_136013438_136016644_136016759_136022585_136022698_136024329_136024484_136030131_136030163_136033413_136033494_136040075_136040182_136044451
transcript_206202.known	chrX	+	2568	8	FSM	ENSG00000022267.19	ENST00000394155.8	2568	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	59.0465053658417	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTCCTGTCTTTTCAT	136145960	True	NA	10	True	AATAAA	-16	NA	136147532	136211354	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_136147629_136169906_136169981_136206406_136206589_136207015_136207191_136207791_136207962_136208454_136208642_136209242_136209443_136209870
transcript_206203.known	chrX	+	2441	7	FSM	ENSG00000022267.19	ENST00000651929.2	2441	7	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_6	16.9156403629567	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTCTTTTCATTCTGC	136145892	True	NA	15	True	AATAAA	-21	NA	136147464	136211359	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_136147629_136169906_136169981_136206406_136206589_136207015_136207191_136207791_136207962_136208454_136208642_136209870
transcript_206204.known	chrX	-	4385	19	FSM	ENSG00000129680.16	ENST00000316077.14	4385	19	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_9	16.1563540991703	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGGTTTTTTCATTATAA	NA	False	NA	NA	False	AATAAA	-15	NA	136251400	136216813	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_136218494_136219397_136219496_136219592_136219672_136220764_136220964_136222392_136222487_136224826_136224881_136225908_136226014_136227283_136227432_136228622_136228759_136230384_136230594_136230838_136230967_136231543_136232221_136236243_136236340_136240381_136240487_136241159_136241278_136244631_136244796_136246064_136246149_136246242_136246342_136251288
transcript_206209.nic	chrX	-	2194	13	ISM	ENSG00000129680.16	ENST00000316077.14	4385	19	-14	9096	-14	-3517	5prime_fragment	FALSE	canonical	3	88	junction_3	10.6572223815068	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTACTCGCTCTCTGTTTGG	NA	False	NA	5	True	NA	NA	NA	136251414	136225909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_136226014_136227283_136227432_136228622_136228759_136230384_136230594_136230838_136230967_136231543_136232221_136236243_136236340_136240381_136240487_136241159_136241278_136244631_136244796_136246064_136246149_136246242_136246342_136251288
transcript_206211.nic	chrX	-	2206	12	ISM	ENSG00000129680.16	ENST00000316077.14	4385	19	-188	10528	-188	3043	5prime_fragment	FALSE	canonical	3	88	junction_2	7.56896665327224	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAGACTAAAAAGAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	136251588	136227341	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_136227432_136228622_136228759_136230384_136230594_136230838_136230967_136231543_136232221_136236243_136236340_136240381_136240487_136241159_136241278_136244631_136244796_136246064_136246149_136246242_136246342_136251288
transcript_206214.nic	chrX	-	646	4	ISM	ENSG00000129680.16	ENST00000370660.3	2432	17	-206	25006	-188	-14248	5prime_fragment	FALSE	canonical	3	97	junction_1	8.33999733546454	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACATAATTTTGCAGCCT	NA	False	NA	-2	True	AAAAAG	-25	NA	136251588	136244632	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_136244796_136246064_136246149_136246242_136246342_136251288
transcript_206215.nic	chrX	-	581	4	ISM	ENSG00000129680.16	ENST00000370660.3	2432	17	-206	25071	-188	-14313	5prime_fragment	FALSE	canonical	3	97	junction_1	8.33999733546454	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAGAAGAACAACGGAG	NA	False	NA	-67	True	AAAACA	-38	NA	136251588	136244697	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_136244796_136246064_136246149_136246242_136246342_136251288
transcript_206216.nic	chrX	-	346	4	ISM	ENSG00000129680.16	ENST00000370660.3	2432	17	-32	25132	-14	-14374	5prime_fragment	FALSE	canonical	3	97	junction_1	8.33999733546454	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCAAGCTCCAATATGAAA	NA	False	NA	NA	False	AATAAA	-30	NA	136251414	136244758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_136244796_136246064_136246149_136246242_136246342_136251288
transcript_206217.nic	chrX	-	483	3	ISM	ENSG00000129680.16	ENST00000370660.3	2432	17	-206	26438	-188	-15680	5prime_fragment	FALSE	canonical	3	100	junction_1	8	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATTTTAGACCTTTTTT	NA	False	NA	62	True	NA	NA	NA	136251588	136246064	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_136246149_136246242_136246342_136251288
transcript_206219.known	chrX	+	3019	10	FSM	ENSG00000102241.12	ENST00000535601.5	3019	10	0	0	0	0	multi-exon	TRUE	canonical	3	212	junction_1	147.452775449139	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTGGACTTGAGTTAAA	136497040	False	NA	59	True	AATAAA	-27	NA	136497078	136512342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_136497440_136497623_136497871_136499597_136499779_136500157_136500206_136500663_136500819_136502777_136502942_136504363_136504464_136509090_136509181_136510081_136510220_136510807
transcript_20622.known	chr1	+	2634	6	FSM	ENSG00000116918.15	ENST00000366639.9	2634	6	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_2	26.026140705068	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTTTTTTTGTTTGTTC	231524654	True	NA	NA	False	AATAAA	-21	NA	231528668	231566524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_231528827_231529254_231529360_231537212_231537328_231542480_231542612_231561127_231561256_231564527
transcript_206222.nic	chrX	+	2006	10	NIC	ENSG00000102241.12	novel	3019	10	NA	NA	-8	-827	combination_of_known_junctions	FALSE	canonical	3	186	junction_1	154.899091007861	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTTAGAAGAAAATGACTC	136489781	True	NA	-92	True	NA	NA	NA	136497212	136511515	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_136497440_136497675_136497871_136499597_136499779_136500157_136500206_136500663_136500819_136502777_136502942_136504363_136504464_136509090_136509181_136510081_136510220_136510807
transcript_206224.nic	chrX	+	2837	10	NIC	ENSG00000102241.12	novel	3019	10	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	186	junction_1	154.899091007861	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGACTTGAGTTAAATTGC	136489781	True	NA	63	True	AATAAA	-31	NA	136497212	136512346	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_136497440_136497675_136497871_136499597_136499779_136500157_136500206_136500663_136500819_136502777_136502942_136504363_136504464_136509090_136509181_136510081_136510220_136510807
transcript_206225.known	chrX	+	2694	9	FSM	ENSG00000102241.12	ENST00000218364.5	2694	9	0	0	0	0	multi-exon	FALSE	canonical	3	555	junction_6	65.9941995557185	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGACTTGAGTTAAATTGC	136494566	False	NA	63	True	AATAAA	-31	NA	136497591	136512346	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_136497871_136499597_136499779_136500157_136500206_136500663_136500819_136502777_136502942_136504363_136504464_136509090_136509181_136510081_136510220_136510807
transcript_206231.known	chrX	+	1014	6	FSM	ENSG00000102241.12	ENST00000448450.5	1014	6	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	191.846813890666	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTAATTTTTTTCCCTT	136489789	True	NA	NA	False	NA	NA	NA	136497220	136502941	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_136497440_136497623_136497871_136499597_136499779_136500157_136500206_136500663_136500819_136502777
transcript_206234.known	chrX	+	885	6	FSM	ENSG00000102241.12	ENST00000425695.5	885	6	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_1	201.585118498365	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGATGCCTCAAAGAAGAAG	136489802	True	NA	NA	False	NA	NA	NA	136497233	136502877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_136497440_136497675_136497871_136499597_136499779_136500157_136500206_136500663_136500819_136502777
transcript_20624.nic	chr1	+	670	5	ISM	ENSG00000116918.15	ENST00000366639.9	2634	6	-59	5295	-57	0	5prime_fragment	FALSE	canonical	3	205	junction_2	26.6739573366983	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGACAATGGGAAAGAAAAT	231528596	False	NA	NA	False	AATAAA	-20	NA	231528609	231561229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_231528827_231529254_231529360_231537212_231537328_231542480_231542612_231561127
transcript_206241.nic	chrX	+	592	3	ISM	ENSG00000102241.12	ENST00000425695.5	885	6	-21	3110	-8	-3110	5prime_fragment	FALSE	canonical	3	186	junction_1	218.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGAGTCAGGTAAGTGGT	136489781	True	NA	26	True	AAAAAG	-44	NA	136497212	136499767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_136497440_136497675_136497871_136499597
transcript_206242.nic	chrX	+	549	2	ISM	ENSG00000102241.12	ENST00000425695.5	885	6	258	3110	-100	-3110	internal_fragment	FALSE	canonical	3	623	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGAGTCAGGTAAGTGGT	136497266	False	NA	26	True	AAAAAG	-44	NA	136497491	136499767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_136497871_136499597
transcript_206243.known	chrX	-	4764	21	FSM	ENSG00000129675.16	ENST00000370620.5	4764	21	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_20	2.76541136180497	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTTGCTTCTTTTTTTG	NA	False	NA	NA	False	AATAAA	-20	NA	136767343	136665546	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_136668170_136669481_136669537_136672019_136672120_136675006_136675097_136676623_136676718_136677935_136677957_136679534_136679661_136680730_136680877_136681889_136681969_136682757_136682845_136685676_136685824_136687931_136687992_136690609_136690749_136706907_136707031_136708674_136708771_136713275_136713371_136732101_136732173_136743584_136743787_136745222_136745348_136747507_136747593_136767143
transcript_206250.nic	chrX	-	3585	11	NIC	ENSG00000147274.14	novel	2012	9	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	787	junction_2	1156.64705506909	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTTTTTTGTGGCAAGG	NA	False	NA	-16	True	AATAAA	-13	NA	136880781	136869193	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_136870418_136872267_136872346_136873245_136874453_136875085_136875169_136875257_136875384_136875470_136875586_136876502_136876656_136877914_136878087_136879016_136879124_136879318_136879454_136880596
transcript_206256.nic	chrX	-	2378	10	NIC	ENSG00000147274.14	novel	4887	8	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	375	junction_2	1299.08326651271	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTTTTTTGTGGCAAGG	NA	False	NA	-16	True	AATAAA	-13	NA	136880781	136869193	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_136870418_136872267_136872346_136875085_136875169_136875257_136875384_136875470_136875586_136876502_136876656_136877914_136878087_136879016_136879124_136879318_136879454_136880596
transcript_20626.known	chr1	-	2172	3	FSM	ENSG00000233461.6	ENST00000654602.1	2172	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	9.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGAATCTTTTCTTTTT	-231527710	True	NA	NA	False	TATAAA	-28	NA	231528604	231520728	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_231522638_231527337_231527416_231528419
transcript_206268.known	chrX	-	2012	9	FSM	ENSG00000147274.14	ENST00000320676.11	2012	9	0	0	0	0	multi-exon	FALSE	canonical	3	3462	junction_8	205.541358368577	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGAAGCTGCAAAGGTGC	NA	False	NA	-19	True	AATAAA	-19	NA	136880725	136873460	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_136874453_136875085_136875169_136875257_136875384_136875470_136875586_136876502_136876656_136877914_136878087_136879016_136879124_136879318_136879454_136880596
transcript_20627.known	chr1	+	7084	13	FSM	ENSG00000162946.23	ENST00000439617.8	7084	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	5.01386965216377	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCACGTGTTTACTTTCAG	231626463	True	NA	NA	False	AATAAA	-15	NA	231626789	232041272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_231626935_231693825_231694806_231701954_231702025_231749925_231750077_231767139_231767270_231770834_231771071_231795241_231795297_231800107_231800211_231818328_231818518_231958827_231958889_232008784_232009050_232026434_232026553_232036691
transcript_206272.known	chrX	-	2148	8	FSM	ENSG00000147274.14	ENST00000562646.5	2148	8	0	0	0	0	multi-exon	FALSE	canonical	3	3462	junction_7	218.96248863349	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGACTTTCGCATTGCTTT	NA	False	NA	-4	True	AGTAAA	-16	NA	136880725	136873957	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_136875169_136875257_136875384_136875470_136875586_136876502_136876656_136877914_136878087_136879016_136879124_136879318_136879454_136880596
transcript_206285.known	chrX	-	2041	3	FSM	ENSG00000147274.14	ENST00000496459.2	2041	3	0	0	0	0	multi-exon	FALSE	canonical	3	787	junction_2	163.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTTTGTGGCAAGGGG	NA	False	NA	-14	True	AATAAA	-15	NA	136873982	136869191	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_136870418_136872267_136872346_136873245
transcript_206286.known	chrX	-	78	1	FSM	ENSG00000214748.2	ENST00000442158.1	78	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCCCTGCCCCCAAAGCAA	NA	False	NA	NA	False	NA	NA	NA	137325049	137324971	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_137325000_137325000
transcript_20629.known	chr1	+	2939	11	FSM	ENSG00000162946.23	ENST00000422590.6	2939	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.07937003968012	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTTTTCTCTCCCCTC	231626510	True	NA	NA	False	ATTAAA	-17	NA	231626836	232009654	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_231626935_231693829_231694806_231701954_231702025_231749925_231750077_231767139_231767270_231770834_231771071_231795241_231795297_231800107_231800211_231818328_231818518_231958827_231958889_232008784
transcript_206296.known	chrX	+	1968	3	FSM	ENSG00000156925.12	ENST00000370606.3	1968	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	115	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGATTATTGTTTTA	137565960	True	NA	11	True	AATAAA	-14	NA	137566517	137577691	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_137567752_137568901_137569066_137577121
transcript_206297.known	chrX	+	4001	3	FSM	ENSG00000156925.12	ENST00000287538.10	4001	3	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_2	7	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTATTTGGTGCCTGA	137562330	True	NA	-16	True	AATAAA	-31	NA	137566126	137572102	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_137567752_137568901_137569066_137569890
transcript_206299.known	chrX	-	19575	5	FSM	ENSG00000129682.16	ENST00000315930.11	19575	5	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_4	22.0340645365307	290	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTGTGTGATCATTGGC	NA	False	NA	2	True	AATAAA	-25	NA	138711717	138614726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_138632987_138635456_138635656_138702983_138703088_138708817_138708929_138710816
transcript_206303.known	chrX	+	849	3	FSM	ENSG00000226031.5	ENST00000438238.1	849	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGACACTTAACTCCAGGA	138711689	False	NA	NA	False	AAAAAG	-28	NA	138712106	138716617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_138712143_138714723_138714810_138715890
transcript_206305.known	chrX	-	7019	30	FSM	ENSG00000101974.15	ENST00000682941.1	7019	30	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_29	18.2578961791718	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATCAGCCTCTTTTTTTT	NA	False	NA	-23	True	AATAAA	-21	NA	139933053	139726347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_139728963_139731650_139731756_139737915_139738070_139740990_139741095_139743558_139743625_139745721_139745858_139750024_139750153_139757807_139757868_139761960_139762107_139763315_139763419_139768259_139768435_139774689_139774954_139782546_139782729_139783163_139783268_139785225_139785300_139787172_139787245_139788191_139788344_139789326_139789489_139796272_139796471_139797175_139797327_139798272_139798355_139798678_139798744_139800059_139800111_139802235_139802340_139804470_139804600_139814877_139814986_139816862_139816944_139819337_139819428_139826703_139826824_139932015
transcript_206311.nic	chrX	-	2059	18	ISM	ENSG00000101974.15	ENST00000682941.1	7019	30	837	56266	837	-57	5prime_fragment	FALSE	canonical	3	112	junction_17	15.7783084423216	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAAAGTTTTCGATGAT	NA	False	NA	NA	False	AAGAAA	-4	NA	139932216	139782613	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_139782729_139783163_139783268_139785225_139785300_139787172_139787245_139788191_139788344_139789326_139789489_139796272_139796471_139797175_139797327_139798272_139798355_139798678_139798744_139800059_139800111_139802235_139802340_139804470_139804600_139814877_139814986_139816862_139816944_139819337_139819428_139826703_139826824_139932015
transcript_206313.nic	chrX	-	1759	15	ISM	ENSG00000101974.15	ENST00000682941.1	7019	30	837	60832	837	-4623	5prime_fragment	FALSE	canonical	3	112	junction_14	17.0007502835634	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGAGTAAGTAGCTCTG	NA	False	NA	NA	False	AAGAAA	-6	NA	139932216	139787179	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_139787245_139788191_139788344_139789326_139789489_139796272_139796471_139797175_139797327_139798272_139798355_139798678_139798744_139800059_139800111_139802235_139802340_139804470_139804600_139814877_139814986_139816862_139816944_139819337_139819428_139826703_139826824_139932015
transcript_206316.known	chrX	+	1497	1	FSM	ENSG00000230707.3	ENST00000453380.3	1234	1	-263	0	-263	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTGACCTTATTTATT	140091376	True	NA	5	True	AATAAA	-16	NA	140091414	140092911	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_140091400_140092900
transcript_206317.known	chrX	-	2085	1	FSM	ENSG00000134595.9	ENST00000370536.5	2085	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGATGGAGTCCTGATAAT	NA	False	NA	-17	True	AATAAA	-13	NA	140505069	140502984	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_140503000_140505100
transcript_206318.known	chrX	+	1354	2	FSM	ENSG00000203930.13	ENST00000669839.1	1354	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTGGCCTGTAATGAAAA	140764321	True	NA	NA	False	AAGAAA	-24	NA	140764497	140773230	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_140764699_140772077
transcript_20632.nnic	chr1	+	2174	6	NNC	ENSG00000235152.1	novel	818	3	NA	NA	-41685	976	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	23.8612656831108	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACACACACATTAGTCAGAC	NA	False	NA	NA	False	AAGAAA	-25	NA	232118405	232186619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_232118714_232152075_232152169_232160170_232160224_232177207_232177267_232183937_232184078_232185098
transcript_206320.known	chrX	-	784	2	FSM	ENSG00000182195.9	ENST00000460721.1	784	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGATTGTCTTTTAATG	NA	False	NA	NA	False	AATAAA	-19	NA	141177016	141175748	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_141176409_141176892
transcript_206321.known	chrX	+	408	2	FSM	ENSG00000203926.5	ENST00000370518.4	408	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTGTATATCTCTGCC	NA	False	NA	NA	False	AATAAA	-15	NA	141589707	141590762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_141589840_141590486
transcript_206322.known	chrX	+	3699	16	FSM	ENSG00000102081.16	ENST00000439526.6	3699	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	50.648944268914	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGATGTTGATGCAATCC	147908907	False	NA	20	True	AATAAA	-20	NA	147912051	147950636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_147912231_147921932_147921986_147925539_147925634_147928321_147928394_147928658_147928808_147929947_147930042_147930127_147930245_147932424_147932596_147932684_147932764_147936509_147936614_147937465_147937601_147940575_147940663_147943130_147943327_147944868_147945052_147945533_147945617_147948733
transcript_20633.nnic	chr1	+	2426	6	NNC	ENSG00000235152.1	novel	818	3	NA	NA	-41745	1168	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	23.8612656831108	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCCAGGGGTATAATTGT	NA	False	NA	NA	False	AATAAA	-24	NA	232118345	232186811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_232118714_232152075_232152169_232160170_232160224_232177207_232177267_232183937_232184078_232185098
transcript_206339.known	chrX	-	7580	9	FSM	ENSG00000010404.18	ENST00000340855.11	7580	9	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_1	22.0535569693417	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCGTGTGTGCAATTCTT	NA	False	NA	NA	False	AATAAA	-18	NA	149505306	149476987	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_149483219_149486924_149487099_149490313_149490441_149496345_149496517_149498106_149498308_149500948_149501038_149503311_149503490_149504156_149504294_149505034
transcript_20635.nnic	chr1	+	2263	6	NNC	ENSG00000235152.1	novel	818	3	NA	NA	-41674	976	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	14.5684590811795	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACACACACATTAGTCAGAC	NA	False	NA	NA	False	AAGAAA	-25	NA	232118416	232186619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_232118714_232120570_232120730_232152075_232152169_232160170_232160224_232183937_232184078_232185098
transcript_206356.known	chrX	-	1399	8	FSM	ENSG00000010404.18	ENST00000370441.8	1399	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	32.7014946921703	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTCATTCTGTGCTT	NA	False	NA	-2	True	AATAAA	-26	NA	149505347	149487130	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_149487314_149490313_149490441_149496345_149496517_149498106_149498308_149500948_149501038_149503311_149503490_149504156_149504294_149505034
transcript_206360.known	chrX	+	1204	5	FSM	ENSG00000197620.11	ENST00000450602.6	1204	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	29.0807066626655	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGTGTTTGAGGCTT	149540603	False	NA	NA	False	AATAAA	-15	NA	149540629	149547309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_149540800_149542018_149542067_149545367_149545501_149545601_149545884_149546738
transcript_206361.known	chrX	+	2407	5	FSM	ENSG00000197620.11	ENST00000393985.8	2407	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	28.3670142947755	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAATTTGCAGTGTTTCTGA	149540937	True	NA	NA	False	ATTAAA	-42	NA	149541011	149548331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_149541344_149542018_149542086_149545367_149545501_149545601_149545884_149546738
transcript_206363.known	chrX	+	1208	5	FSM	ENSG00000197620.11	ENST00000423540.6	1208	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	31.372758884102	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTTGTGTGATGCCTC	149540908	True	NA	NA	False	NA	NA	NA	149540982	149547154	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_149541293_149542018_149542086_149545367_149545501_149545601_149545884_149546738
transcript_206365.known	chrX	-	1213	3	FSM	ENSG00000010404.18	ENST00000428056.6	1213	3	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	4	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAGAAAAAAGTATTGGAA	NA	False	NA	NA	False	NA	NA	NA	149505280	149502659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_149503490_149504156_149504294_149505034
transcript_206368.nic	chrX	-	2668	8	NNC	ENSG00000269556.9	novel	2720	7	NA	NA	-27	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	67.8882635403986	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGTGCATGATGTGTATC	NA	False	NA	NA	False	AATAAA	-16	NA	149631819	149596556	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_149597183_149597260_149598256_149599553_149599678_149600302_149600480_149603986_149604071_149608626_149608835_149611286_149611464_149631542
transcript_206371.known	chrX	-	2720	7	FSM	ENSG00000269556.9	ENST00000600449.8	2720	7	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_3	25.9020591202064	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTGCATGATGTGTATCT	NA	False	NA	NA	False	AATAAA	-17	NA	149631792	149596555	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_149598256_149599553_149599678_149600302_149600480_149603986_149604071_149608626_149608835_149611286_149611464_149631542
transcript_206373.known	chrX	-	2662	6	FSM	ENSG00000269556.9	ENST00000611119.4	2662	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	61.6038959806926	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGTGCATGATGTGTATC	NA	False	NA	NA	False	AATAAA	-16	NA	149631912	149596556	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_149598256_149599553_149599678_149600302_149600480_149603986_149604071_149608626_149608835_149631542
transcript_206377.known	chrX	-	2178	4	FSM	ENSG00000269556.9	ENST00000612022.1	2178	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	73.6176307385368	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTGCATGATGTGTATCT	NA	False	NA	NA	False	AATAAA	-17	NA	149631719	149596555	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_149598256_149599553_149599678_149600302_149600480_149631542
transcript_206378.known	chrX	-	903	4	FSM	ENSG00000269556.9	ENST00000507237.5	903	4	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_2	21.6487105081727	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTCTAAAGTTTAATTG	NA	False	NA	NA	False	AATAAA	-16	NA	149631698	149603708	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_149604071_149608626_149608835_149611286_149611464_149631542
transcript_206385.known	chrX	-	1440	6	FSM	ENSG00000197021.9	ENST00000462691.5	1440	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	66.9883571973518	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTCGGTATCAGGGCAA	NA	False	NA	NA	False	AATAAA	-20	NA	149938435	149929526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_149930082_149932588_149932768_149933621_149933904_149934004_149934138_149937432_149937481_149938192
transcript_206389.nnic	chrX	-	2489	6	NNC	ENSG00000197021.9	novel	1440	6	NA	NA	-224	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_5	90.9096254529739	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTCGGTATCAGGGCAA	NA	False	NA	NA	False	AATAAA	-20	NA	149938924	149929526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_149930082_149932588_149932768_149933621_149933904_149934004_149934138_149937432_149937481_149937632
transcript_20639.nnic	chr1	+	2162	6	NNC	ENSG00000235152.1	novel	818	3	NA	NA	-41630	976	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_1	20.1851430512642	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACACACACATTAGTCAGAC	232118174	True	NA	NA	False	AAGAAA	-25	NA	232118460	232186619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_232118714_232120627_232120730_232152075_232152169_232160170_232160224_232183937_232184078_232185098
transcript_206390.nic	chrX	-	1547	6	NIC	ENSG00000197021.9	novel	1440	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	80.8653201316856	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTCGGTATCAGGGCAA	NA	False	NA	NA	False	AATAAA	-20	NA	149938491	149929526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_149930082_149932588_149932768_149933621_149933904_149934004_149934138_149937432_149937481_149938141
transcript_206394.nnic	chrX	-	1492	6	NNC	ENSG00000197021.9	novel	1333	5	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	82.5847443539059	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGTGTTTGAGGCTT	NA	False	NA	NA	False	AATAAA	-15	NA	149938738	149932196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_149932346_149932433_149932768_149933621_149933904_149934004_149934138_149937432_149937481_149938192
transcript_206398.known	chrX	-	1129	6	FSM	ENSG00000197021.9	ENST00000370409.7	1129	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	96.5538191890927	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGCACCTGATCCCTTTG	NA	False	NA	NA	False	NA	NA	NA	149938472	149932578	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_149932768_149933621_149933904_149934004_149934138_149934376_149934574_149937432_149937481_149938192
transcript_20640.nnic	chr1	+	3140	5	NNC	ENSG00000235152.1	novel	818	3	NA	NA	-41630	976	intron_retention	FALSE	canonical	3	12	junction_4	25.4693443182191	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACACACACATTAGTCAGAC	232118174	True	NA	NA	False	AAGAAA	-25	NA	232118460	232186619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_232118714_232152075_232152169_232160170_232160224_232177207_232177267_232183937
transcript_206400.nic	chrX	-	1388	5	NIC	ENSG00000197021.9	novel	1333	5	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_4	73.1688970806585	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACTGGTTAGTGTTTGAG	NA	False	NA	NA	False	AATAAA	-11	NA	149938499	149932200	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_149932768_149933621_149933904_149934004_149934138_149937432_149937481_149938141
transcript_206401.known	chrX	-	1316	5	FSM	ENSG00000197021.9	ENST00000370404.5	1316	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	81.567073626556	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACTGGTTAGTGTTTGAG	NA	False	NA	NA	False	AATAAA	-11	NA	149938459	149932200	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_149932768_149933621_149933904_149934004_149934138_149937413_149937481_149938192
transcript_206402.known	chrX	+	3412	15	FSM	ENSG00000171100.16	ENST00000370396.7	3412	15	0	0	0	0	multi-exon	FALSE	canonical	2	46	junction_10	10.1882785792382	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTTCAGGGCTGTGA	150567439	True	NA	10	True	AATAAA	-20	NA	150568620	150673143	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_150568663_150592604_150592678_150596497_150596571_150598591_150598687_150614588_150614700_150619037_150619140_150638942_150639027_150641268_150641419_150645682_150645872_150649715_150649902_150657820_150658028_150659663_150659757_150660370_150660485_150663432_150663610_150671427
transcript_206406.nnic	chrX	-	3609	12	NNC	ENSG00000102181.21	novel	3567	11	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_10	9.91117576065916	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTCTTCTGATGGTGT	NA	False	NA	-26	True	AATAAA	-16	NA	150898647	150766335	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_150769102_150770303_150770370_150776173_150776294_150777443_150777483_150793690_150793757_150795205_150795290_150795417_150795487_150814861_150814937_150816006_150816079_150828305_150828369_150831230_150831294_150898521
transcript_206407.known	chrX	-	3567	11	FSM	ENSG00000102181.21	ENST00000370377.8	3567	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_9	13.2593363333162	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTCTTCTGATGGTGT	NA	False	NA	-26	True	AATAAA	-16	NA	150898668	150766335	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_150769102_150770303_150770370_150776173_150776294_150777443_150777483_150793690_150793757_150795205_150795290_150795417_150795487_150814861_150814937_150816006_150816079_150831230_150831294_150898521
transcript_206408.known	chrX	-	988	9	FSM	ENSG00000102181.21	ENST00000466436.5	988	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	15.0561449249135	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGGCCAAGATGATGCTGA	NA	False	NA	NA	False	NA	NA	NA	150898629	150768728	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_150769102_150770303_150770370_150776173_150776294_150777443_150777483_150793690_150793757_150795205_150795290_150795417_150795487_150831230_150831294_150898521
transcript_206415.known	chrX	+	3507	5	FSM	ENSG00000029993.15	ENST00000325307.12	3507	5	0	0	0	0	multi-exon	FALSE	canonical	3	3732	junction_1	426.780974271347	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATCAGTGGGCTGTCTGC	150918481	True	NA	40	True	AATAAA	-26	NA	150983334	150990771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_150983377_150985594_150985750_150986050_150986191_150987127_150987303_150987776
transcript_20642.nnic	chr1	+	2175	5	NNC	ENSG00000235152.1	novel	818	3	NA	NA	-41745	976	at_least_one_novel_splicesite	TRUE	canonical	3	35	junction_3	13.7727085208393	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACACACACATTAGTCAGAC	NA	False	NA	NA	False	AAGAAA	-25	NA	232118345	232186619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_232118714_232152075_232152169_232160170_232160224_232183937_232184078_232185098
transcript_206423.known	chrX	+	812	5	FSM	ENSG00000029993.15	ENST00000448905.6	812	5	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	1819.00403724126	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTGTGAATACTTAGAGT	150918552	False	NA	6	True	AATAAA	-18	NA	150983405	150987932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_150983592_150985594_150985750_150986050_150986191_150987127_150987303_150987776
transcript_20643.nnic	chr1	+	2252	5	NNC	ENSG00000235152.1	novel	818	3	NA	NA	-41630	1168	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	13.7727085208393	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCCAGGGGTATAATTGT	232118174	True	NA	NA	False	AATAAA	-24	NA	232118460	232186811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_232118714_232152075_232152169_232160170_232160224_232183937_232184078_232185098
transcript_206434.known	chrX	+	2020	2	FSM	ENSG00000102195.10	ENST00000218316.4	2020	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCCCTTTCTAGTTTGTT	151175542	True	NA	NA	False	NA	NA	NA	151176583	151181465	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_151176909_151179770
transcript_206435.known	chrX	+	4715	3	FSM	ENSG00000160131.14	ENST00000330374.7	4715	3	0	0	0	0	multi-exon	FALSE	canonical	3	624	junction_2	3.5	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTGTGTCCTGATTCA	151392726	True	NA	17	True	ATTAAA	-20	NA	151397205	151409364	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_151397362_151403630_151403741_151404915
transcript_206437.known	chrX	+	1303	4	FSM	ENSG00000130032.17	ENST00000538575.5	1303	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	4.02768199119819	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTCTAGCACCCGGGCC	151694959	False	NA	NA	False	AATAAA	-19	NA	151695257	151701591	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_151695276_151698783_151698822_151699995_151700157_151700505
transcript_206439.known	chrX	+	5705	4	FSM	ENSG00000130032.17	ENST00000674457.1	5705	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	4.96655480858378	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCGTCATCCATCTTG	151695363	True	NA	12	True	AATAAA	-23	NA	151695457	151705924	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_151695545_151698783_151698822_151699995_151700157_151700505
transcript_206441.known	chrX	+	5977	4	FSM	ENSG00000130032.17	ENST00000370353.3	5977	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.84754619472471	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCGTCATCCATCTTG	151698212	False	NA	12	True	AATAAA	-23	NA	151698306	151705924	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_151698666_151698783_151698822_151699995_151700157_151700505
transcript_206442.known	chrX	+	1841	4	FSM	ENSG00000147381.12	ENST00000682265.1	1841	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	42.0819306696935	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACTGGCTCATTTCTTCT	151912478	False	NA	16	True	AATAAA	-13	NA	151912508	151925166	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_151912543_151912801_151912970_151923452_151923525_151923599
transcript_206443.known	chrX	+	914	3	FSM	ENSG00000147381.12	ENST00000448295.5	914	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	14.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGGAGGAAATCTGGGA	151913395	False	NA	NA	False	NA	NA	NA	151913462	151924315	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_151913589_151923452_151923525_151923599
transcript_206444.known	chrX	+	990	3	FSM	ENSG00000147381.12	ENST00000441865.5	990	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	26.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCAGGAAACTGCTCACC	151914762	False	NA	NA	False	NA	NA	NA	151914829	151924388	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_151914959_151923452_151923525_151923599
transcript_206445.known	chrX	+	1770	3	FSM	ENSG00000147381.12	ENST00000393920.6	1770	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	26.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGCTCATTTCTTCTCT	151916806	False	NA	18	True	AATAAA	-15	NA	151916873	151925168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_151917003_151923452_151923525_151923599
transcript_206446.known	chrX	+	1773	3	FSM	ENSG00000147381.12	ENST00000360243.6	1773	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	33	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTCATTTCTTCTCTAT	151918159	False	NA	20	True	AATAAA	-17	NA	151918226	151925170	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_151918357_151923452_151923525_151923599
transcript_206447.known	chrX	+	997	3	FSM	ENSG00000147381.12	ENST00000431971.1	997	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	31	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCAGGAAACTGCTCACC	151918834	False	NA	NA	False	NA	NA	NA	151918901	151924388	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_151919038_151923452_151923525_151923599
transcript_206448.known	chrX	+	686	3	FSM	ENSG00000147381.12	ENST00000425182.6	686	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	31.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGCAACACCTACACCCT	151919652	False	NA	NA	False	NA	NA	NA	151919689	151924180	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_151919723_151923452_151923525_151923599
transcript_206449.known	chrX	+	1724	3	FSM	ENSG00000147381.12	ENST00000276344.6	1724	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	42.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTCATTTCTTCTCTAT	151912821	True	NA	20	True	AATAAA	-17	NA	151912888	151925170	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_151912970_151923452_151923525_151923599
transcript_206450.known	chrX	+	1982	3	FSM	ENSG00000147381.12	ENST00000393921.6	1982	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	48.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACTGGCTCATTTCTTCT	151916151	False	NA	16	True	AATAAA	-13	NA	151916218	151925166	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_151916321_151923211_151923525_151923599
transcript_206451.known	chrX	-	3669	10	FSM	ENSG00000011677.13	ENST00000370314.9	3669	10	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	19.4809181723939	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTCTGCAGAACTTTCT	NA	False	NA	0	True	ATTAAA	-17	NA	152451315	152166233	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_152168564_152189729_152189942_152197632_152197786_152208000_152208145_152224762_152224846_152255777_152255999_152284667_152284736_152345580_152345703_152364430_152364597_152451145
transcript_206457.known	chrX	+	6468	9	FSM	ENSG00000268089.3	ENST00000598523.3	6468	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	10.2072278312968	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGTCATCGTGTTTCCTC	152637419	True	NA	11	True	AATAAA	-24	NA	152637894	152657542	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_152638352_152640377_152640467_152645526_152645595_152646947_152647169_152649250_152649334_152649741_152649880_152650427_152650581_152651525_152651783_152652540
transcript_206458.known	chrX	+	1682	3	FSM	ENSG00000221867.9	ENST00000370278.4	1682	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTCGTTTCTTTTCCGT	152698637	True	NA	NA	False	AATAAA	-17	NA	152698793	152702347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_152698830_152700621_152700688_152700767
transcript_206459.known	chrX	+	1762	3	FSM	ENSG00000221867.9	ENST00000598245.2	1762	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	8	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCTTCACTGGCTCGT	152698610	True	NA	NA	False	AATAAA	-6	NA	152698766	152702336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_152698830_152700557_152700688_152700767
transcript_206461.nnic	chrX	+	2184	7	NNC	ENSG00000183305.14	novel	750	6	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	64.4480841884036	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGCTCATTTCTTTACCA	NA	False	NA	NA	False	AATAAA	-16	NA	152714591	152718606	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_152714683_152714763_152714929_152715078_152715158_152715956_152716077_152716647_152716746_152716895_152716962_152717041
transcript_206471.known	chrX	+	1886	5	FSM	ENSG00000183305.14	ENST00000682532.1	1886	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	62.5319918121916	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTCATTTCTTTACCAT	NA	False	NA	NA	False	AATAAA	-17	NA	152714627	152718607	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_152714683_152715078_152715158_152715956_152716077_152716895_152716962_152717041
transcript_206472.known	chrX	+	879	5	FSM	ENSG00000183305.14	ENST00000423993.5	879	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	66.8893676154888	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCTCCGAGTACTTGCA	NA	False	NA	NA	False	NA	NA	NA	152714608	152717562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_152714683_152715956_152716077_152716647_152716746_152716895_152716962_152717041
transcript_206478.known	chrX	+	1714	3	FSM	ENSG00000183305.14	ENST00000370293.6	1714	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	91	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTCATTTCTTTACCAT	NA	False	NA	NA	False	AATAAA	-17	NA	152714600	152718607	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_152714683_152716895_152716962_152717041
transcript_206479.known	chrX	+	753	3	FSM	ENSG00000183305.14	ENST00000453150.5	753	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	101.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTTCAGCAAAGCCTCC	NA	False	NA	NA	False	NA	NA	NA	152714680	152717551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_152714858_152716895_152716962_152717041
transcript_206481.known	chrX	-	645	4	FSM	ENSG00000198930.13	ENST00000452779.3	645	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.49691252107735	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTCTGTGTGTCTC	NA	False	NA	1	True	AATAAA	-21	NA	152733721	152727483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_152727864_152728073_152728225_152732444_152732505_152733667
transcript_206482.known	chrX	-	630	4	FSM	ENSG00000198930.13	ENST00000361211.9	630	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.85861230093008	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTCTGTGTGTCTC	NA	False	NA	1	True	AATAAA	-21	NA	152733699	152727483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_152727864_152728073_152728232_152732444_152732505_152733667
transcript_206484.known	chrX	+	1664	2	FSM	ENSG00000213401.10	ENST00000357916.8	1664	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCCTGTTCACTGGCTC	152733717	True	NA	3	True	AATAAA	-4	NA	152733778	152737669	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_152733860_152736086
transcript_20649.known	chr1	-	6914	23	FSM	ENSG00000116991.12	ENST00000674635.1	6914	23	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	19.1276702343762	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTGTCAGGTGACTAG	-232628476	True	NA	NA	False	AATAAA	-27	NA	232630133	232397964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_232399274_232402391_232402474_232403447_232403572_232404124_232404179_232415493_232415626_232425588_232425809_232428410_232428565_232432246_232432472_232439107_232439497_232441290_232441395_232441767_232441869_232443601_232443686_232445528_232445787_232460886_232461162_232464839_232465417_232471370_232471529_232479626_232479731_232483791_232483967_232490873_232491063_232493526_232493661_232513856_232515609_232574173_232574223_232629868
transcript_206491.nic	chrX	-	2098	7	NIC	ENSG00000268606.6	novel	2025	6	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_6	60.9744937567249	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCCTGTTCACTGGCTC	NA	False	NA	NA	False	AATAAA	-4	NA	152753887	152749875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_152751429_152751508_152751575_152751724_152751823_152752393_152752514_152753312_152753392_152753541_152753624_152753787
transcript_206495.known	chrX	-	725	6	FSM	ENSG00000268606.6	ENST00000617846.4	725	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	62.3326559677991	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATCCGATGAGGGCTCCA	NA	False	NA	NA	False	NA	NA	NA	152753842	152751121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_152751429_152751508_152751575_152751724_152751823_152752393_152752514_152753312_152753392_152753787
transcript_206499.known	chrX	-	576	6	FSM	ENSG00000268606.6	ENST00000617505.1	576	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	64.8197500766549	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGCTTCTTCCTCTTCTAC	NA	False	NA	NA	False	NA	NA	NA	152753840	152751252	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_152751429_152751508_152751575_152752393_152752514_152753312_152753392_152753541_152753624_152753787
transcript_206502.known	chrX	-	1947	5	FSM	ENSG00000268606.6	ENST00000620710.4	1947	5	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	66.5093978321861	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTCATTTCTTTACCAT	NA	False	NA	NA	False	AATAAA	-17	NA	152753884	152749862	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_152751429_152751508_152751575_152751724_152751823_152752393_152752514_152753787
transcript_206504.nic	chrX	-	2090	5	ISM	ENSG00000268606.6	ENST00000623438.3	2009	6	71	12	27	0	intron_retention	FALSE	canonical	3	38	junction_4	59.888959750525	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCCTGTTCACTGGCTC	NA	False	NA	NA	False	AATAAA	-4	NA	152753813	152749875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_152751429_152751508_152751575_152752393_152752514_152753312_152753392_152753541
transcript_206505.known	chrX	-	1886	5	FSM	ENSG00000268606.6	ENST00000684311.1	1886	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	62.0664965984065	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTCATTTCTTTACCAT	NA	False	NA	NA	False	AATAAA	-17	NA	152753842	152749862	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_152751429_152751508_152751575_152752393_152752514_152753312_152753392_152753787
transcript_206510.known	chrX	-	2024	4	FSM	ENSG00000268606.6	ENST00000611557.4	2024	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	78.4984076271615	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTCATTTCTTTACCAT	NA	False	NA	NA	False	AATAAA	-17	NA	152753884	152749862	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_152751429_152751508_152751575_152752393_152752514_152753612
transcript_206511.known	chrX	-	1830	4	FSM	ENSG00000268606.6	ENST00000595583.5	1830	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	62.6578007912822	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCCTGTTCACTGGCTC	NA	False	NA	NA	False	AATAAA	-4	NA	152753878	152749875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_152751429_152751508_152751575_152752393_152752514_152753787
transcript_206514.known	chrX	-	1728	3	FSM	ENSG00000268606.6	ENST00000611674.4	1728	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	91.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGCTCATTTCTTTACCA	NA	False	NA	NA	False	AATAAA	-16	NA	152753884	152749863	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_152751429_152751508_152751575_152753787
transcript_206516.known	chrX	-	1662	2	FSM	ENSG00000268606.6	ENST00000598543.5	1662	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGCTCATTTCTTTACCA	NA	False	NA	NA	False	AATAAA	-16	NA	152753884	152749863	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_152751429_152753787
transcript_206517.nnic	chrX	+	797	5	NNC	ENSG00000268916.6	novel	789	5	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	52.4738029877767	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGTGTGTCTGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	152753887	152760219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_152753982_152755154_152755215_152758906_152759022_152759482_152759634_152759842
transcript_206518.nnic	chrX	+	848	5	NNC	ENSG00000268916.6	novel	789	5	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_4	31.767711595266	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGTGTGTCTGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	152753887	152760219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_152753982_152755154_152755215_152758906_152759022_152759482_152759685_152759842
transcript_206522.known	chrX	+	789	5	FSM	ENSG00000268916.6	ENST00000617158.4	789	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	54.9380332738623	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTCTGTGTGTCTC	NA	False	NA	NA	False	AATAAA	-21	NA	152753920	152760222	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_152753982_152755154_152755215_152758906_152759022_152759475_152759649_152759842
transcript_206523.known	chrX	-	1740	3	FSM	ENSG00000197172.11	ENST00000329342.10	1682	3	-58	0	-31	0	multi-exon	FALSE	canonical	0	0	junction_2	2	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTCGTTTCTTTTCCGT	NA	False	NA	NA	False	AATAAA	-17	NA	152769747	152766135	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_152767716_152767795_152767862_152769653
transcript_206524.known	chrX	-	1413	5	FSM	ENSG00000147400.10	ENST00000370277.5	1413	5	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_2	26.9478663348325	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTCGTGAATTTATTTGC	NA	False	NA	2	True	NA	NA	NA	152830757	152826993	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_152827931_152828536_152828675_152829148_152829278_152829601_152829761_152830707
transcript_206525.nic	chrX	-	283	3	ISM	ENSG00000147400.10	ENST00000370277.5	1413	5	-31	2241	-31	-1425	5prime_fragment	FALSE	canonical	3	355	junction_2	18	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAGAAAATGATAAGTGAA	NA	False	NA	NA	False	AAGAAA	-8	NA	152830788	152829234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_152829278_152829601_152829761_152830707
transcript_206528.known	chrX	+	1630	9	FSM	ENSG00000147383.11	ENST00000440023.5	1630	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	123.628918037003	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTGTCTCTCTGTTTA	152825846	True	NA	30	True	NA	NA	NA	152830966	152869363	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_152831118_152831633_152831701_152846281_152846433_152850264_152850424_152858769_152858917_152862595_152862725_152865818_152865962_152867570_152867674_152868783
transcript_206533.known	chrX	+	1833	8	FSM	ENSG00000147383.11	ENST00000370274.8	1833	8	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_4	35.7879240834682	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCCGTGCCTGCCTGCA	152825942	True	NA	NA	False	NA	NA	NA	152831062	152869729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_152831118_152846281_152846433_152850264_152850424_152858769_152858917_152862595_152862725_152865818_152865962_152867570_152867674_152868783
transcript_20654.nic	chr1	-	4558	22	ISM	ENSG00000135749.19	ENST00000258229.14	7530	34	-16	111971	-16	0	5prime_fragment	FALSE	canonical	0	0	junction_1	27.9027303014713	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGATAGGTTTAATGCA	-233290045	True	NA	-5	True	AATAAA	-18	NA	233295741	233095405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_233095864_233135012_233135191_233139713_233139856_233160282_233160434_233161270_233161364_233177801_233177899_233179065_233179176_233198938_233199031_233200153_233200265_233208517_233208690_233217898_233217932_233218030_233218185_233227225_233227372_233236844_233236981_233250738_233250833_233252353_233252500_233252640_233252789_233258027_233259345_233261284_233261322_233262044_233262166_233262957_233263164_233295325
transcript_206544.known	chrX	+	3191	9	FSM	ENSG00000147394.19	ENST00000454925.1	3191	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	11.0954664165144	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGTCAGTGTTAAAGTT	152941662	True	NA	13	True	AATAAA	-14	NA	152941700	152973472	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_152941831_152945266_152945465_152959698_152959897_152963838_152963950_152965446_152965528_152967166_152967239_152969381_152969485_152970442_152970542_152971273
transcript_206546.known	chrX	+	3158	3	FSM	ENSG00000183837.10	ENST00000424805.1	3158	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	10.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGGCCTCGCCTCTGCTGT	153056106	True	NA	25	True	AATAAA	-18	NA	153056481	153060462	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_153056639_153056949_153058772_153059283
transcript_206547.known	chrX	+	3682	2	FSM	ENSG00000183837.10	ENST00000593810.3	3682	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGGCCTCGCCTCTGCTGT	153056094	True	NA	25	True	AATAAA	-18	NA	153056469	153060462	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_153056639_153056949
transcript_206548.known	chrX	+	2238	2	FSM	ENSG00000235961.6	ENST00000421798.5	2238	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGGCCTCGCCTCTGCTGT	NA	False	NA	8	True	AATAAA	-18	NA	153072453	153075019	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_153072607_153072934
transcript_206549.known	chrX	+	6420	4	FSM	ENSG00000063587.15	ENST00000650114.2	6420	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	2.05480466765633	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTTCCTTGACGTCTT	153333323	True	NA	9	True	AATAAA	-17	NA	153334152	153352926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_153334286_153336633_153336711_153345519_153345622_153346818
transcript_206550.known	chrX	+	6305	3	FSM	ENSG00000063587.15	ENST00000370249.3	6305	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	9	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTTGCATCAAGTAGATT	153333317	True	NA	-35	True	NA	NA	NA	153334146	153352882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_153334286_153345519_153345622_153346818
transcript_206553.nic	chrX	-	1506	11	ISM	ENSG00000183479.13	ENST00000330912.7	2509	13	-14	3197	-14	-2950	5prime_fragment	FALSE	canonical	3	49	junction_2	211.872343641165	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAGTTGCCTCCAGCCTG	NA	False	NA	-34	True	AAGAAA	-13	NA	153470601	153447669	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_153447910_153454393_153454509_153454876_153455054_153455541_153455767_153456264_153456365_153456492_153456652_153457136_153457229_153462609_153462672_153464987_153465056_153469145_153469262_153470449
transcript_206557.known	chrX	-	1306	10	FSM	ENSG00000213397.12	ENST00000370211.10	1306	10	0	0	0	0	multi-exon	FALSE	canonical	3	511	junction_2	40.964603811487	236	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTGCCTCCAGCCTGCT	NA	False	NA	-32	True	AAGAAA	-15	NA	153470576	153447667	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153447910_153454393_153454509_153455541_153455767_153456264_153456365_153456492_153456652_153457136_153457229_153462609_153462672_153464987_153465056_153469145_153469262_153470449
transcript_206562.known	chrX	+	2353	8	FSM	ENSG00000182492.16	ENST00000331595.9	2353	8	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_5	3.18157963590287	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCGTGCGCTGCTCCTGT	153494803	True	NA	8	True	ATTAAA	-19	NA	153494979	153509546	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_153495114_153504620_153504870_153505237_153505351_153505862_153506077_153506528_153506640_153506829_153506924_153507046_153507186_153508247
transcript_20657.nic	chr1	-	4307	22	ISM	ENSG00000135749.19	ENST00000258229.14	7530	34	-16	112222	-16	0	5prime_fragment	FALSE	canonical	0	0	junction_1	27.9027303014713	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGATTACATTTTAATG	-233290045	True	NA	NA	False	AATAAA	-15	NA	233295741	233095656	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_233095864_233135012_233135191_233139713_233139856_233160282_233160434_233161270_233161364_233177801_233177899_233179065_233179176_233198938_233199031_233200153_233200265_233208517_233208690_233217898_233217932_233218030_233218185_233227225_233227372_233236844_233236981_233250738_233250833_233252353_233252500_233252640_233252789_233258027_233259345_233261284_233261322_233262044_233262166_233262957_233263164_233295325
transcript_206570.known	chrX	-	1253	5	FSM	ENSG00000262919.8	ENST00000576892.8	1253	5	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	31.2119768678628	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGACCCTTGGCTTTGCT	NA	False	NA	-5	True	AATAAA	-17	NA	153599139	153587924	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153588455_153592505_153592734_153594546_153594680_153596003_153596188_153598961
transcript_206573.known	chrX	-	1164	5	FSM	ENSG00000262919.8	ENST00000440428.5	1164	5	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	47.0106370941726	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCAATAGGGACCCTTGG	NA	False	NA	-12	True	AATAAA	-10	NA	153599117	153587931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153588395_153592505_153592734_153594546_153594680_153596003_153596188_153598961
transcript_206577.known	chrX	+	554	1	FSM	ENSG00000260081.2	ENST00000562749.1	554	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGGTATTTACCATCTCA	153599177	True	NA	18	True	AATAAA	-30	NA	153599339	153599893	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_153599300_153599900
transcript_206579.known	chrX	+	2289	4	FSM	ENSG00000130829.18	ENST00000370167.8	2289	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4.96655480858378	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGAGAGAGAAGCTACCTC	153642501	False	NA	12	True	AATAAA	-21	NA	153642533	153651326	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_153642612_153647918_153648327_153649231_153649688_153649979
transcript_206580.known	chrX	+	2434	4	FSM	ENSG00000130829.18	ENST00000342782.4	2434	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	1.69967317119759	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGAGAGAGAAGCTACCTC	153647096	True	NA	12	True	AATAAA	-21	NA	153647202	153651326	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_153647426_153647918_153648327_153649231_153649688_153649979
transcript_206583.known	chrX	+	3931	13	FSM	ENSG00000130821.17	ENST00000253122.10	3931	13	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_1	36.5296683076464	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGCTCCTGCTTCCGCCT	153685125	True	NA	NA	False	AATAAA	-19	NA	153687925	153696588	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_153688837_153690374_153690507_153691303_153691554_153691974_153692108_153693040_153693176_153693262_153693367_153693461_153693587_153693904_153694018_153694129_153694268_153694343_153694447_153694532_153694634_153694718_153694890_153695073
transcript_206586.known	chrX	-	1473	12	FSM	ENSG00000130822.16	ENST00000340888.8	1473	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_11	6.96745682049444	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCAGTGGTGACCTGGG	NA	False	NA	-13	True	AATAAA	-15	NA	153673813	153669732	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153670131_153670449_153670595_153670743_153670832_153670917_153670997_153671077_153671191_153671284_153671361_153671548_153671673_153671879_153672019_153672125_153672201_153672565_153672698_153673008_153673079_153673779
transcript_2066.known	chr1	-	6627	12	FSM	ENSG00000162408.11	ENST00000377705.6	6627	12	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_9	11.0146408951716	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTGTGTAATTTTATG	-6546894	True	NA	-10	True	ATTAAA	-19	NA	6554513	6521346	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6526004_6526695_6526830_6528993_6529172_6531967_6532080_6532462_6532761_6533279_6533442_6541829_6541928_6544825_6544923_6545044_6545181_6549570_6549699_6550395_6550616_6554106
transcript_206605.known	chrX	-	1612	12	FSM	ENSG00000130822.16	ENST00000370150.5	1612	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	9.5372258904752	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCAGTGGTGACCTGGG	NA	False	NA	-13	True	AATAAA	-15	NA	153673693	153669732	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153670127_153670449_153670595_153670743_153670832_153670917_153670997_153671077_153671191_153671284_153671361_153671548_153671673_153671879_153672019_153672125_153672201_153672565_153672698_153673008_153673079_153673516
transcript_206611.known	chrX	-	1284	8	FSM	ENSG00000185825.17	ENST00000345046.12	1284	8	0	0	0	0	multi-exon	FALSE	canonical	3	2501	junction_2	183.439697036873	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGTGTGTGACTGCAGCT	NA	False	NA	-1	True	AATAAA	-23	NA	153724387	153700491	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153700976_153702006_153702108_153702934_153703059_153703958_153704095_153715541_153715690_153720871_153720973_153723152_153723289_153724333
transcript_206614.known	chrX	-	573	4	FSM	ENSG00000185825.17	ENST00000645802.1	573	4	0	0	0	0	multi-exon	FALSE	canonical	3	2816	junction_3	132.476412994918	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCCCTGTCTGTGTTAG	NA	False	NA	NA	False	NA	NA	NA	153724396	153715416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153715690_153720871_153720973_153723152_153723289_153724333
transcript_206616.known	chrX	+	3669	10	FSM	ENSG00000101986.12	ENST00000218104.6	3669	10	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_3	5.31478255248951	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGCCTCAGAGCCTGGT	153724597	True	NA	16	True	AGTAAA	-29	NA	153724855	153744755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_153726167_153729231_153729413_153736111_153736255_153736344_153736514_153737156_153737252_153740091_153740238_153740573_153740720_153742986_153743072_153743220_153743347_153743488
transcript_206617.known	chrX	+	1016	2	FSM	ENSG00000101986.12	ENST00000370129.4	1016	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGTTGTTTTTGTTTGT	153725806	False	NA	2	True	ATTAAA	-17	NA	153725816	153729897	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_153726167_153729231
transcript_206619.known	chrX	-	1335	13	FSM	ENSG00000067829.20	ENST00000217901.10	1335	13	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_12	27.0630693422276	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTGGCGTGGGCCTCCCT	NA	False	NA	-34	True	AATAAA	-15	NA	153794375	153785767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153785974_153786211_153786273_153786354_153786450_153786800_153786948_153787050_153787154_153787463_153787598_153787822_153787956_153788074_153788136_153789711_153789825_153790194_153790293_153790563_153790576_153790809_153790852_153794245
transcript_206623.known	chrX	-	1712	12	FSM	ENSG00000067829.20	ENST00000370092.7	1712	12	0	0	0	0	multi-exon	TRUE	canonical	3	312	junction_11	24.9670857710872	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCGTGGGCCTCCCTCA	NA	False	NA	-32	True	AATAAA	-17	NA	153794512	153785765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153786273_153786354_153786450_153786800_153786948_153787050_153787154_153787463_153787598_153787822_153787956_153788074_153788136_153789711_153789825_153790194_153790293_153790563_153790576_153790809_153790852_153794245
transcript_206626.known	chrX	-	1662	11	FSM	ENSG00000067829.20	ENST00000370093.5	1662	11	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_10	20.2901453912977	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGCGTGGGCCTCCCTC	NA	False	NA	-33	True	AATAAA	-16	NA	153794381	153785766	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153786450_153786800_153786948_153787050_153787154_153787463_153787598_153787822_153787956_153788074_153788136_153789711_153789825_153790194_153790293_153790563_153790576_153790809_153790852_153794245
transcript_206630.known	chrX	+	608	6	FSM	ENSG00000180879.14	ENST00000370086.8	608	6	0	0	0	0	multi-exon	FALSE	canonical	3	2000	junction_1	160.068735235835	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGGCTGCTGGCTTGCG	153775859	True	NA	45	True	AATAAA	-28	NA	153794667	153798499	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_153794755_153796433_153796553_153797457_153797533_153797724_153797815_153798070_153798137_153798328
transcript_206634.known	chrX	+	785	7	FSM	ENSG00000180879.14	ENST00000471880.5	785	7	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	998.602092371576	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGACCTGGGGCTGCTGG	153775870	True	NA	39	True	AATAAA	-22	NA	153794678	153798493	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_153794755_153795662_153795862_153796438_153796553_153797457_153797533_153797724_153797815_153798070_153798137_153798328
transcript_206635.known	chrX	+	2482	4	FSM	ENSG00000180879.14	ENST00000460616.5	2482	4	0	0	0	0	multi-exon	FALSE	canonical	3	2083	junction_3	145.122936390726	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGACCTGGGGCTGCTGG	153775850	True	NA	39	True	AATAAA	-22	NA	153794658	153798493	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_153796553_153797457_153797533_153797724_153797815_153798070
transcript_206647.nic	chrX	-	3571	8	NIC	ENSG00000067840.13	novel	3761	8	NA	NA	-99	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	19.9171754410865	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGGCCTCCCTGTGTTCA	NA	False	NA	-5	True	AATAAA	-27	NA	153830242	153802165	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_153804901_153805096_153805208_153805504_153805607_153806070_153806134_153806741_153806841_153807278_153807370_153808341_153808596_153830126
transcript_206653.known	chrX	-	3418	6	FSM	ENSG00000067840.13	ENST00000544474.5	3418	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	21.3222888077242	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCGTGGCCTCCCTGTGTT	NA	False	NA	-7	True	AATAAA	-25	NA	153830548	153802167	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153804901_153805096_153805208_153805504_153805607_153806070_153806134_153806741_153806841_153830238
transcript_206658.known	chrX	-	3761	8	FSM	ENSG00000067840.13	ENST00000393758.7	3761	8	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_6	11.0638222719504	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGGCCTCCCTGTGTTCA	NA	False	NA	-5	True	AATAAA	-27	NA	153830544	153802165	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153804901_153805096_153805208_153805504_153805607_153806070_153806134_153806741_153806841_153807278_153807370_153808341_153808596_153830238
transcript_206661.known	chrX	-	4655	27	FSM	ENSG00000198910.14	ENST00000370055.5	4655	27	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_17	16.4922879592304	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCACTGCCCACTGGCCGG	NA	False	NA	NA	False	NA	NA	NA	153886154	153861952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153862895_153863476_153863550_153863882_153864018_153864321_153864478_153864584_153864705_153864820_153864995_153865087_153865211_153865298_153865501_153865703_153865820_153866648_153866872_153867053_153867125_153867355_153867554_153867799_153867911_153867997_153868123_153868301_153868459_153868560_153868728_153868840_153868953_153869519_153869664_153869802_153869935_153870055_153870241_153870387_153870500_153870789_153870961_153871056_153871180_153872151_153872355_153872591_153872698_153875760_153875945_153886064
transcript_206670.known	chrX	-	3372	23	FSM	ENSG00000089820.16	ENST00000370028.7	3372	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	40.9548481474033	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGAGCCAGCTCTCTGTCT	NA	False	NA	-8	True	CATAAA	-22	NA	153926260	153907375	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153907963_153909069_153909170_153909442_153909536_153909740_153909925_153910011_153910086_153910170_153910405_153910505_153910612_153910699_153910835_153910921_153911000_153911128_153911190_153912699_153912803_153913023_153913052_153913217_153913303_153913408_153913601_153913777_153913880_153918831_153919054_153919154_153919284_153919566_153919687_153920625_153920809_153921096_153921160_153921364_153921528_153921604_153921810_153926135
transcript_206674.known	chrX	-	3254	22	FSM	ENSG00000089820.16	ENST00000350060.10	3254	22	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_15	18.7371119727498	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGAGCCAGCTCTCTGT	NA	False	NA	-10	True	CATAAA	-20	NA	153926264	153907377	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153907963_153909069_153909170_153909442_153909536_153909740_153909925_153910011_153910086_153910170_153910405_153910505_153910612_153910699_153910835_153910921_153911000_153911128_153911190_153912699_153912803_153913023_153913052_153913217_153913303_153913408_153913601_153913777_153913880_153918831_153919054_153919154_153919284_153920625_153920809_153921096_153921160_153921364_153921528_153921604_153921810_153926135
transcript_20668.known	chr1	+	1762	5	FSM	ENSG00000135778.12	ENST00000366627.4	1762	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	653.670597472458	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGAACTCTTTGTT	232944461	True	NA	5	True	AATAAA	-17	NA	232950639	232977528	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_232950745_232955556_232955720_232956346_232956444_232969908_232970119_232976341
transcript_206688.nic	chrX	-	3415	21	NIC	ENSG00000089820.16	novel	3254	22	NA	NA	-19	0	intron_retention	FALSE	canonical	3	100	junction_14	19.1741362256556	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGAGCCAGCTCTCTGT	NA	False	NA	-10	True	CATAAA	-20	NA	153926324	153907377	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_153907963_153909069_153909170_153909442_153909536_153909740_153909925_153910011_153910086_153910170_153910612_153910699_153910835_153910921_153911000_153911128_153911190_153912699_153912803_153913023_153913052_153913217_153913303_153913408_153913601_153913777_153913880_153918831_153919054_153919154_153919284_153920625_153920809_153921096_153921160_153921364_153921528_153921604_153921810_153926135
transcript_20669.known	chr1	+	6324	5	FSM	ENSG00000135778.12	ENST00000366628.10	6324	5	0	0	0	0	multi-exon	FALSE	canonical	3	1435	junction_3	45.5686295602578	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGTTGTCTTATTTTC	232944432	True	NA	8	True	TATAAA	-16	NA	232950610	232983882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_232950745_232955556_232955720_232956346_232956444_232969908_232970119_232978162
transcript_206722.known	chrX	-	1603	8	FSM	ENSG00000102030.16	ENST00000464845.6	1603	8	0	0	0	0	multi-exon	FALSE	canonical	3	508	junction_3	43.4111807285277	927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTCCTGTCTGTGTTGTA	NA	False	NA	-4	True	NA	NA	NA	153935037	153929224	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153930224_153930762_153930848_153932070_153932116_153932315_153932432_153932538_153932585_153933942_153934002_153934376_153934476_153934883
transcript_206725.known	chrX	-	1080	7	FSM	ENSG00000102030.16	ENST00000466877.5	1080	7	0	0	0	0	multi-exon	FALSE	canonical	3	515	junction_2	39.7425744287184	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAACTTTGTGTGTGAGCG	NA	False	NA	-16	True	AATAAA	-18	NA	153935015	153929925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153930224_153930762_153930848_153932070_153932432_153932538_153932585_153933942_153934002_153934376_153934476_153934883
transcript_206726.known	chrX	-	538	7	FSM	ENSG00000102030.16	ENST00000370011.7	538	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	270.869228390544	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAGAGAAGGGCAGGCAC	NA	False	NA	NA	False	NA	NA	NA	153935015	153930204	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153930224_153930762_153930848_153932315_153932432_153932538_153932585_153933960_153934002_153934376_153934476_153934883
transcript_206728.known	chrX	-	599	7	FSM	ENSG00000102030.16	ENST00000432089.1	599	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	199.054222093713	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATGGCCGACGAGGTAA	NA	False	NA	NA	False	NA	NA	NA	153935066	153930778	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153930848_153932070_153932116_153932315_153932432_153932538_153932585_153933960_153934002_153934376_153934476_153934883
transcript_206732.known	chrX	-	1062	5	FSM	ENSG00000102030.16	ENST00000477750.5	1062	5	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_4	35	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGAGGTGTGGGTCCCTG	NA	False	NA	NA	False	NA	NA	NA	153935080	153931770	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153932432_153932538_153932585_153933942_153934002_153934376_153934476_153934883
transcript_206736.known	chrX	-	740	2	FSM	ENSG00000198910.14	ENST00000616195.1	740	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGCACTGAGTGCTTTT	NA	False	NA	NA	False	NA	NA	NA	153886161	153883863	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153884507_153886064
transcript_206737.known	chrX	-	5138	29	FSM	ENSG00000198910.14	ENST00000370060.7	5138	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	45.7464730434857	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCACCTTTTGTTATTTCG	NA	False	NA	-5	True	AATAAA	-14	NA	153886173	153861515	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153862895_153863367_153863380_153863476_153863550_153863882_153864018_153864321_153864478_153864584_153864705_153864820_153864995_153865087_153865211_153865298_153865501_153865703_153865820_153866648_153866872_153867053_153867125_153867355_153867554_153867799_153867911_153867997_153868123_153868301_153868459_153868560_153868728_153868840_153868953_153869519_153869664_153869802_153869935_153870055_153870241_153870387_153870500_153870789_153870961_153871056_153871180_153872151_153872355_153872591_153872698_153873227_153873243_153875760_153875945_153886064
transcript_206738.known	chrX	-	1304	11	FSM	ENSG00000102032.13	ENST00000423624.5	1304	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	3.74699879903904	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGAGTCCGCTCCACCT	NA	False	NA	-17	True	NA	NA	NA	153944626	153935285	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153935405_153935488_153935577_153940101_153940234_153941477_153941654_153941949_153942032_153942854_153943080_153943545_153943719_153943894_153943971_153944079_153944156_153944308_153944419_153944579
transcript_20674.known	chr1	+	980	4	FSM	ENSG00000135778.12	ENST00000490807.5	980	4	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	690.689188821973	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTTACTGCTTAATAAAT	232944435	True	NA	-23	True	AAGAAA	-31	NA	232950613	232978751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_232950745_232955556_232955720_232956346_232956444_232978162
transcript_206740.nic	chrX	-	1432	6	ISM	ENSG00000102032.13	ENST00000423624.5	1304	11	-101	6945	-40	14	5prime_fragment	FALSE	canonical	0	0	junction_5	4.1182520563948	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAACTTGCTAGGCCCAA	NA	False	NA	NA	False	NA	NA	NA	153944727	153942230	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_153943080_153943545_153943719_153943894_153943971_153944079_153944156_153944308_153944419_153944579
transcript_206743.known	chrX	-	1334	11	FSM	ENSG00000102032.13	ENST00000393700.8	1334	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	3.40734500748016	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCGGCTGTGCGCGCGTC	NA	False	NA	0	True	AATAAA	-17	NA	153944643	153935268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153935405_153935488_153935577_153940101_153940234_153941477_153941654_153941949_153942032_153942854_153943080_153943545_153943719_153943894_153943971_153944079_153944156_153944308_153944419_153944583
transcript_206744.known	chrX	-	8876	26	FSM	ENSG00000172534.14	ENST00000310441.12	8876	26	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_22	92.7902236229658	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTAGGTGTCTCACTGTG	NA	False	NA	-4	True	ATTAAA	-19	NA	153971818	153947556	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153949387_153949552_153949617_153950242_153950544_153950812_153950999_153951349_153951488_153951588_153951708_153951840_153952159_153952513_153952959_153953606_153953771_153954065_153955543_153956190_153956412_153956624_153956764_153956917_153957061_153957313_153957534_153957781_153957887_153958024_153958250_153958568_153958767_153959330_153959492_153959801_153960162_153960234_153960415_153961541_153961649_153962221_153962307_153963224_153963434_153964123_153964285_153964577_153964727_153970647
transcript_206746.nic	chrX	-	2952	6	ISM	ENSG00000172534.14	ENST00000310441.12	8876	26	-301	13216	-301	-764	5prime_fragment	FALSE	canonical	3	257	junction_2	22.8035085019828	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTTTTGCGTGAGAGT	NA	False	NA	NA	False	AATAAA	-29	NA	153972119	153960772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_153961649_153962221_153962307_153963224_153963434_153964123_153964285_153964577_153964727_153970647
transcript_206747.known	chrX	-	3624	10	FSM	ENSG00000172534.14	ENST00000444191.5	3624	10	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_7	149.286037483933	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTAGGTGTCTCACTGTG	NA	False	NA	-4	True	ATTAAA	-19	NA	153954121	153947556	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_153949387_153949552_153949617_153950242_153950544_153950812_153950999_153951349_153951488_153951588_153951708_153951840_153952162_153952513_153952959_153953606_153953771_153954065
transcript_206748.known	chrX	+	1452	2	FSM	ENSG00000177854.8	ENST00000369982.5	1452	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGATCGTCTGGAGTATCTT	153972507	True	NA	6	True	NA	NA	NA	153972753	153983194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_153972861_153981849
transcript_206749.known	chrX	-	2049	14	FSM	ENSG00000184216.14	ENST00000393687.6	2049	14	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	48.9040843637382	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTCACCTGGGCAGATC	NA	False	NA	NA	False	AAGAAA	-21	NA	154019812	154011858	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154011918_154012528_154012679_154013042_154013344_154014041_154014279_154016031_154016098_154016436_154016645_154016948_154017068_154018005_154018121_154018290_154018356_154018598_154018788_154018974_154019079_154019196_154019329_154019430_154019599_154019676
transcript_206751.known	chrX	-	3581	14	FSM	ENSG00000184216.14	ENST00000369980.8	3581	14	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_11	21.4707727583391	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGGGCTCTACTTGTGGA	NA	False	NA	-6	True	AATAAA	-15	NA	154019902	154010506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154011918_154012528_154012679_154013042_154013434_154014041_154014279_154016031_154016098_154016436_154016645_154016948_154017068_154018005_154018121_154018290_154018356_154018598_154018788_154018974_154019079_154019196_154019329_154019430_154019599_154019676
transcript_206761.known	chrX	-	3319	13	FSM	ENSG00000184216.14	ENST00000369974.6	3319	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	58.7988567538142	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGGCTCTACTTGTGGAC	NA	False	NA	-5	True	AATAAA	-16	NA	154019876	154010505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154011918_154012528_154012679_154013042_154013434_154016031_154016098_154016436_154016645_154016948_154017068_154018005_154018121_154018290_154018356_154018598_154018788_154018974_154019079_154019196_154019329_154019430_154019599_154019676
transcript_206771.known	chrX	-	784	5	FSM	ENSG00000169057.24	ENST00000369957.5	784	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	60.1123947285416	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTGACTTCACGGTAA	NA	False	NA	NA	False	NA	NA	NA	154097663	154031369	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154031451_154032206_154032558_154058398_154058567_154092183_154092308_154097603
transcript_206772.known	chrX	-	1712	5	FSM	ENSG00000169057.24	ENST00000628176.2	1712	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	46.0081514516721	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACTTAGAGTTTCGTGG	NA	False	NA	NA	False	AATAAA	-21	NA	154097737	154030238	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154031287_154031395_154031451_154032206_154032558_154092183_154092308_154097603
transcript_206774.known	chrX	-	10467	4	FSM	ENSG00000169057.24	ENST00000303391.11	10467	4	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	23.4568161143456	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGGTCTGGGCTTTCAT	NA	False	NA	-3	True	GATAAA	-18	NA	154097717	154021572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154031451_154032206_154032558_154092183_154092308_154097603
transcript_206775.known	chrX	-	1174	4	FSM	ENSG00000169057.24	ENST00000407218.5	1174	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	52.2642856600524	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGCAGCGTCTGCAAAG	NA	False	NA	NA	False	NA	NA	NA	154097689	154030604	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154031287_154031395_154031451_154032206_154032558_154097603
transcript_206776.known	chrX	-	10343	3	FSM	ENSG00000169057.24	ENST00000453960.7	10343	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	33	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGGTCTGGGCTTTCAT	NA	False	NA	-3	True	GATAAA	-18	NA	154097717	154021572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154031451_154032206_154032558_154097603
transcript_206777.nic	chrX	-	441	3	ISM	ENSG00000169057.24	ENST00000628176.2	1712	5	-84	2220	-84	0	5prime_fragment	FALSE	canonical	3	87	junction_2	5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGAGCCCGTGCAGCCAT	NA	False	NA	NA	False	AAAAAG	-36	NA	154097821	154032458	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_154032558_154092183_154092308_154097603
transcript_206779.known	chrX	-	2558	1	FSM	ENSG00000169057.24	ENST00000629277.1	2558	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAGATGAGTTTAATAGGC	NA	False	NA	NA	False	NA	NA	NA	154097523	154094965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154095000_154097500
transcript_206780.known	chrX	+	2518	13	FSM	ENSG00000007350.17	ENST00000369915.8	2518	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.493006648591635	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTTTATTCAGCACGTG	NA	False	NA	NA	False	AATAAA	-15	NA	154295794	154330350	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154295994_154305303_154305422_154309344_154309443_154310835_154311028_154311110_154311239_154312579_154312774_154315172_154315338_154320756_154320914_154323206_154323338_154325338_154325423_154327590_154327688_154327838_154327959_154329515
transcript_206781.known	chrX	-	8240	47	FSM	ENSG00000196924.19	ENST00000369856.8	8240	47	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_19	578.278585867872	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGCGTGGCTGTAGCTT	NA	False	NA	-6	True	AATAAA	-17	NA	154371222	154348529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154349037_154349361_154349566_154349648_154349868_154350030_154350208_154350908_154351042_154351580_154351697_154351883_154352022_154352180_154352448_154352552_154352676_154352771_154352925_154353000_154353205_154353295_154353458_154353553_154353728_154353914_154354044_154354150_154354292_154354380_154354484_154354615_154354712_154354824_154355073_154357250_154357275_154357433_154357624_154358198_154358356_154358444_154358569_154358983_154359155_154359245_154359407_154359483_154359647_154359731_154359906_154359989_154360588_154361307_154361571_154361669_154361788_154361978_154362149_154362241_154362333_154362417_154362579_154362660_154362785_154364021_154364166_154364258_154364373_154364525_154364720_154364820_154364958_154365135_154365260_154365348_154365487_154366023_154366225_154366307_154366471_154366561_154366640_154366731_154366851_154367396_154367545_154367640_154367739_154367841_154368091_154370872
transcript_206782.known	chrX	-	8278	46	FSM	ENSG00000196924.19	ENST00000360319.9	8278	46	0	0	0	0	multi-exon	TRUE	canonical	3	926	junction_39	494.94392050458	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCGTGGCTGTAGCTTT	NA	False	NA	-5	True	AATAAA	-18	NA	154371283	154348528	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154349037_154349361_154349566_154349648_154349868_154350030_154350208_154350908_154351042_154351580_154351697_154351883_154352022_154352180_154352448_154352552_154352676_154352771_154352925_154353000_154353205_154353295_154353458_154353553_154353728_154353914_154354044_154354150_154354292_154354380_154354484_154354615_154354712_154354824_154355073_154357433_154357624_154358198_154358356_154358444_154358569_154358983_154359155_154359245_154359407_154359483_154359647_154359731_154359906_154359989_154360588_154361307_154361571_154361669_154361788_154361978_154362149_154362241_154362333_154362417_154362579_154362660_154362785_154364021_154364166_154364258_154364373_154364525_154364720_154364820_154364958_154365135_154365260_154365348_154365487_154366023_154366225_154366307_154366471_154366561_154366640_154366731_154366851_154367396_154367545_154367640_154367739_154367841_154368091_154370872
transcript_20679.known	chr1	+	767	4	FSM	ENSG00000135778.12	ENST00000494689.5	767	4	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	626.91360382964	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATGCACATGATTTGGGT	232944426	True	NA	-34	True	NA	NA	NA	232950604	232978482	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_232950745_232956346_232956444_232969908_232970119_232978162
transcript_206792.known	chrX	+	680	2	FSM	ENSG00000285018.1	ENST00000644854.1	680	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCGTATGGGGAGGGGTG	154374545	True	NA	NA	False	NA	NA	NA	154374594	154376934	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154374728_154376387
transcript_206795.known	chrX	+	1114	6	FSM	ENSG00000102119.12	ENST00000684633.1	1114	6	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_1	101.286524276431	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTCTTGGGGCTCCAGGA	154367874	False	NA	69	True	NA	NA	NA	154379508	154381574	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154379563_154379689_154379795_154379941_154380020_154380233_154380368_154380752_154380803_154380881
transcript_206796.known	chrX	+	798	6	FSM	ENSG00000102119.12	ENST00000684082.1	798	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	106.605815976428	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTGGGGGCAGGGGCAGG	154367850	False	NA	NA	False	NA	NA	NA	154379484	154381273	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154379567_154379689_154379795_154379941_154380020_154380276_154380368_154380752_154380803_154380881
transcript_206797.known	chrX	+	946	6	FSM	ENSG00000102119.12	ENST00000428228.5	946	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	102.47028837668	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGGCAGGGGCTTTATGT	154367726	True	NA	NA	False	NA	NA	NA	154379360	154381283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154379538_154379689_154379795_154379941_154380020_154380233_154380368_154380752_154380803_154380881
transcript_206798.known	chrX	+	501	5	FSM	ENSG00000102119.12	ENST00000468294.5	501	5	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_4	15.3195136998535	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGCCGGGACAGTGCCTA	154367890	False	NA	NA	False	NA	NA	NA	154379524	154380894	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154379567_154379689_154379795_154379941_154380020_154380233_154380368_154380752
transcript_206800.known	chrX	+	1281	5	FSM	ENSG00000102119.12	ENST00000683576.1	1281	5	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_4	17.1227188261678	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTTGGCTCTTCCTGGAG	154367874	False	NA	18	True	AATAAA	-19	NA	154379508	154381523	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154379567_154379689_154379795_154379941_154380368_154380752_154380803_154380881
transcript_206803.known	chrX	+	765	3	FSM	ENSG00000102119.12	ENST00000494443.5	765	3	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_2	14	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGGGCCTCCGGGGAG	154367793	False	NA	NA	False	GATAAA	-29	NA	154379427	154380462	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154379567_154379689_154379795_154379941
transcript_206804.known	chrX	+	1906	11	FSM	ENSG00000102125.16	ENST00000601016.6	1906	11	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_6	40.6546430312701	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGGCCTCTCTGTAG	154408991	True	NA	22	True	CATAAA	-26	NA	154411538	154421726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154411953_154412085_154412215_154413206_154413253_154413481_154413568_154414100_154414191_154419542_154419624_154419704_154419747_154420031_154420095_154420211_154420265_154420657_154420736_154420902
transcript_206808.known	chrX	+	1102	11	FSM	ENSG00000102125.16	ENST00000652390.1	1102	11	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	48.0084367585532	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGTTGGCTAGGGGAGC	154409431	False	NA	NA	False	GGGGCT	-34	NA	154411978	154421308	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154412007_154412085_154412215_154413206_154413253_154413481_154413568_154414100_154414191_154419542_154419624_154419704_154419747_154420031_154420095_154420211_154420265_154420657_154420736_154420902
transcript_206812.known	chrX	+	1230	10	FSM	ENSG00000102125.16	ENST00000612012.5	1230	10	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_6	36.0804998459805	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAGCAGGGAGGAAGAAGC	154409102	False	NA	NA	False	NA	NA	NA	154411649	154421203	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154411953_154412085_154412215_154413206_154413253_154413481_154413568_154414100_154414191_154419542_154419624_154420031_154420095_154420211_154420265_154420657_154420736_154420902
transcript_206813.known	chrX	+	1790	10	FSM	ENSG00000102125.16	ENST00000612460.5	1790	10	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	38.2296504409798	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATATGTGTTGGCTTGTT	154408991	True	NA	-4	True	NA	NA	NA	154411538	154421700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154411953_154412085_154412215_154413206_154413253_154413481_154413568_154419542_154419624_154419704_154419747_154420031_154420095_154420211_154420265_154420657_154420736_154420902
transcript_206816.known	chrX	+	1900	10	FSM	ENSG00000102125.16	ENST00000615986.4	1900	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	48.3554227939354	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGGCCTCTCTGTAG	154409013	True	NA	22	True	CATAAA	-26	NA	154411560	154421726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154411953_154412085_154412215_154413206_154413359_154413481_154413568_154419542_154419624_154419704_154419747_154420031_154420095_154420211_154420265_154420657_154420736_154420902
transcript_206818.known	chrX	+	1632	10	FSM	ENSG00000102125.16	ENST00000475699.6	1632	10	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	48.4928402504489	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTCAGGTGGGCCGCAG	154409005	True	NA	NA	False	NA	NA	NA	154411552	154421502	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154412007_154412085_154412215_154413206_154413253_154413481_154413568_154419542_154419624_154419704_154419747_154420031_154420095_154420211_154420265_154420657_154420736_154420902
transcript_206821.known	chrX	-	3008	10	FSM	ENSG00000013563.14	ENST00000369809.5	3008	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_9	17.7979052727776	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCCTCTTGGTCCGCAT	NA	False	NA	NA	False	AATAAA	-26	NA	154412090	154401237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154402842_154402941_154403191_154403268_154403382_154403521_154403623_154404827_154404915_154404994_154405084_154405433_154405656_154409111_154409197_154409417_154409676_154411890
transcript_206830.known	chrX	+	1485	9	FSM	ENSG00000102125.16	ENST00000613002.4	1485	9	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_5	29.8579972536672	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCACGTCTTCCTTCTGC	154408993	True	NA	NA	False	NA	NA	NA	154411540	154421439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154411953_154412085_154412215_154413206_154413253_154413481_154413568_154419542_154419624_154420031_154420095_154420211_154420265_154420657_154420736_154420902
transcript_206834.known	chrX	+	1928	9	FSM	ENSG00000102125.16	ENST00000652685.1	1928	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	47.9477254413596	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATATGTGTTGGCTTGTT	154409244	False	NA	-4	True	NA	NA	NA	154411791	154421700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154411953_154412085_154412215_154413206_154413359_154413481_154413568_154419542_154419624_154419704_154420095_154420211_154420265_154420657_154420736_154420902
transcript_206838.known	chrX	-	2249	9	FSM	ENSG00000013563.14	ENST00000309585.9	2249	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_8	17.5779513880315	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAAATGGCTGTAAACTG	NA	False	NA	NA	False	AATAAA	-20	NA	154412112	154401760	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154402842_154402941_154403191_154403268_154403382_154403521_154403623_154404827_154404915_154404994_154405084_154405433_154405656_154409111_154409197_154411890
transcript_206856.known	chrX	-	2610	8	FSM	ENSG00000013563.14	ENST00000369807.6	2610	8	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	6.5121550400237	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTCTTGGTCCGCATGT	NA	False	NA	NA	False	AATAAA	-28	NA	154409254	154401235	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154402842_154402941_154403191_154403268_154403382_154403521_154403623_154404827_154404915_154404994_154405084_154405433_154405656_154409111
transcript_206857.known	chrX	-	2665	8	FSM	ENSG00000013563.14	ENST00000393638.5	2665	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	25.0069378128453	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCCTCTTGGTCCGCAT	NA	False	NA	NA	False	AATAAA	-26	NA	154412090	154401237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154402842_154402941_154403191_154403268_154403382_154403521_154403623_154404827_154404915_154404994_154405084_154405433_154405656_154411890
transcript_206859.known	chrX	+	2278	6	FSM	ENSG00000147403.18	ENST00000344746.8	2278	6	0	0	0	0	multi-exon	FALSE	canonical	3	16930	junction_5	407.231138298633	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACAAGTGTCCTATCTCA	154149292	True	NA	NA	False	AATAAA	-23	NA	154398371	154402339	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154398543_154399337_154399397_154399486_154399595_154399802_154399942_154400463_154400627_154400701
transcript_206866.known	chrX	+	2247	7	FSM	ENSG00000102125.16	ENST00000652476.1	2247	7	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	19.3821223468088	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTGGCTTGTTGTAAAA	154409135	False	NA	2	True	CATAAA	-6	NA	154411682	154421706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154411953_154412085_154412215_154413206_154413568_154419542_154420095_154420211_154420265_154420657_154420736_154420902
transcript_20687.known	chr1	+	5853	10	FSM	ENSG00000143674.11	ENST00000366624.8	5853	10	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_5	15.8332358671464	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGATCCTCTCTTGATT	233326491	True	NA	45	True	AATAAA	-29	NA	233327723	233385148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_233328834_233346441_233346623_233353806_233353956_233354835_233355012_233362052_233362294_233372037_233372161_233375915_233376067_233376429_233376528_233378930_233379711_233382304
transcript_206877.known	chrX	+	1649	3	FSM	ENSG00000102125.16	ENST00000621647.2	1649	3	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTAGTCCCAGCTACTC	154409243	False	NA	NA	False	AATACA	-28	NA	154411790	154414564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154411953_154412085_154412215_154413206
transcript_206879.known	chrX	-	1939	1	FSM	ENSG00000280195.1	ENST00000624054.1	1939	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTGGCTGGTGCCTGTA	NA	False	NA	NA	False	AATACA	-14	NA	154398816	154396877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154396900_154398800
transcript_206880.known	chrX	+	585	6	FSM	ENSG00000147403.18	ENST00000458500.5	585	6	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_5	6777.10345206564	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTGTATCTACATTCT	154149298	True	NA	30	True	AATAAA	-21	NA	154398377	154400917	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154398395_154398496_154398543_154399337_154399397_154399486_154399595_154399802_154399942_154400701
transcript_206881.known	chrX	+	1519	3	FSM	ENSG00000147403.18	ENST00000489200.5	1519	3	0	0	0	0	multi-exon	FALSE	canonical	3	17060	junction_1	516.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTTCCTGTCCACCTAT	154149297	True	NA	11	True	AATAAA	-2	NA	154398376	154400898	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154398543_154399337_154399595_154399802
transcript_206882.known	chrX	+	802	5	FSM	ENSG00000147403.18	ENST00000467168.5	802	5	0	0	0	0	multi-exon	FALSE	canonical	3	17060	junction_1	399.40103592755	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGTCTTTGTATCTACA	154398416	True	NA	26	True	AATAAA	-17	NA	154398496	154400913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154398543_154399337_154399397_154399486_154399595_154399802_154399942_154400463
transcript_206883.known	chrX	+	748	6	FSM	ENSG00000147403.18	ENST00000406022.6	748	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6965.19039222906	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACCTATGTCTTTGTATC	154398809	False	NA	22	True	AATAAA	-13	NA	154398889	154400909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154398961_154399337_154399397_154399486_154399595_154399802_154399942_154400463_154400627_154400701
transcript_206884.known	chrX	-	598	2	FSM	ENSG00000197180.3	ENST00000360656.3	633	2	33	2	33	-2	multi-exon	FALSE	canonical	3	32	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTCTCTGGCACTTTGTT	NA	False	NA	4	True	AATAAA	-21	NA	154428479	154424379	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154424626_154428127
transcript_206887.known	chrX	+	2054	10	FSM	ENSG00000071553.18	ENST00000369762.7	2054	10	0	0	0	0	multi-exon	FALSE	canonical	1	185	junction_7	121.93714227694	880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGCCTCTTGTCGCTCA	154418953	True	NA	16	True	AATAAA	-21	NA	154428676	154436516	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154428854_154429047_154429175_154431829_154431905_154432265_154432460_154432930_154432972_154433634_154433721_154434207_154434447_154435138_154435187_154435273_154435506_154435681
transcript_206891.known	chrX	+	4515	10	FSM	ENSG00000071553.18	ENST00000455205.5	4515	10	0	0	0	0	multi-exon	FALSE	canonical	1	29	junction_2	187.218298673032	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGGGCCTCTTGTCGCTC	154418974	False	NA	15	True	AATAAA	-20	NA	154428697	154436515	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154428854_154429047_154431658_154431829_154431905_154432265_154432460_154432930_154432972_154433634_154433721_154434207_154434447_154435138_154435187_154435273_154435506_154435681
transcript_20690.nic	chr1	+	2329	9	ISM	ENSG00000143674.11	ENST00000366624.8	5853	10	-35	6153	-35	4861	5prime_fragment	FALSE	canonical	3	100	junction_5	16.768646337734	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCTAGTCAGGCCTACAT	233326456	True	NA	NA	False	AATAAA	-2	NA	233327688	233378995	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_233328834_233346441_233346623_233353806_233353956_233354835_233355012_233362052_233362294_233372037_233372161_233375915_233376067_233376429_233376528_233378930
transcript_206904.known	chrX	+	2240	11	FSM	ENSG00000203879.12	ENST00000447750.7	2240	11	0	0	0	0	multi-exon	FALSE	canonical	3	814	junction_5	86.5632716572104	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGATCTTGATGGTTA	154428250	True	NA	16	True	AATAAA	-17	NA	154437153	154443467	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154437300_154438522_154438631_154438764_154438865_154439005_154439141_154439940_154440140_154440374_154440507_154441095_154441196_154441622_154441795_154442110_154442256_154442373_154442429_154442519
transcript_206910.nic	chrX	+	2766	10	NIC	ENSG00000203879.12	novel	2240	11	NA	NA	-50	0	intron_retention	FALSE	canonical	3	934	junction_5	59.452024438841	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGATCTTGATGGTTA	154427139	False	NA	16	True	AATAAA	-17	NA	154436862	154443467	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_154437300_154438522_154438631_154438764_154438865_154439005_154439141_154439940_154440507_154441095_154441196_154441622_154441795_154442110_154442256_154442373_154442429_154442519
transcript_206916.nic	chrX	+	3679	8	NIC	ENSG00000203879.12	novel	2240	11	NA	NA	53	0	intron_retention	FALSE	canonical	3	975	junction_4	40.5336846565512	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGATCTTGATGGTTA	154436264	True	NA	16	True	AATAAA	-17	NA	154436965	154443467	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_154437300_154438522_154438631_154438764_154438865_154439005_154439141_154439940_154441795_154442110_154442256_154442373_154442429_154442519
transcript_206922.known	chrX	+	600	4	FSM	ENSG00000203879.12	ENST00000475976.5	600	4	0	0	0	0	multi-exon	FALSE	canonical	3	1059	junction_1	16.5193489244852	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGTGAAGGACCAGAGAGG	154428250	True	NA	NA	False	NA	NA	NA	154437153	154439251	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154437300_154438522_154438631_154438764_154438865_154439005
transcript_206927.known	chrX	+	1337	13	FSM	ENSG00000071859.15	ENST00000393600.8	1337	13	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_3	45.0555213042752	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTCGGACCAAATTC	154440356	True	NA	37	True	NA	NA	NA	154444140	154450654	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154444347_154445632_154445718_154445811_154445912_154446414_154446561_154448483_154448561_154448689_154448757_154448892_154448955_154449220_154449298_154449680_154449736_154449882_154449932_154450028_154450100_154450208_154450320_154450423
transcript_206928.nic	chrX	+	1900	13	NIC	ENSG00000071859.15	novel	1337	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	90.8556165328019	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTCGGACCAAATTC	154440356	True	NA	37	True	NA	NA	NA	154444140	154450654	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_+_154444910_154445632_154445718_154445811_154445912_154446414_154446561_154448483_154448561_154448689_154448757_154448892_154448955_154449220_154449298_154449680_154449736_154449882_154449932_154450028_154450100_154450208_154450320_154450423
transcript_20693.nic	chr1	+	2090	7	ISM	ENSG00000143674.11	ENST00000366624.8	5853	10	-35	9158	-35	1856	5prime_fragment	FALSE	canonical	3	100	junction_5	12.9957257930786	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAATTTTAAGAAAAAAGGT	233326456	True	NA	NA	False	NA	NA	NA	233327688	233375990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_233328834_233346441_233346623_233353806_233353956_233354835_233355012_233362052_233362294_233372037_233372161_233375915
transcript_206930.known	chrX	+	1470	12	FSM	ENSG00000071859.15	ENST00000464419.5	1470	12	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_3	46.9534673817978	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTCGGACCAAATTC	154440370	True	NA	37	True	NA	NA	NA	154444154	154450654	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154444347_154445632_154445718_154445811_154445912_154446414_154446561_154448483_154448561_154448689_154448757_154448892_154448955_154449220_154449298_154449680_154449932_154450028_154450100_154450208_154450320_154450423
transcript_206939.known	chrX	-	949	3	FSM	ENSG00000196976.8	ENST00000357360.5	967	3	24	-6	24	6	multi-exon	FALSE	canonical	3	1702	junction_1	76.5	591	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGTTTATTTGCAGCT	NA	False	NA	-4	True	AATAAA	-19	NA	154479257	154477768	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154478059_154478282_154478412_154478727
transcript_20694.known	chr1	+	3910	6	FSM	ENSG00000143674.11	ENST00000366623.7	3910	6	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_5	13.8938835463667	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATTCAAGATTGTTACAC	233326535	True	NA	NA	False	AATAAA	-13	NA	233327767	233374134	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_233328834_233346441_233346623_233353806_233353956_233354835_233355012_233362052_233362294_233372037
transcript_206941.known	chrX	-	2327	4	FSM	ENSG00000102178.13	ENST00000369660.9	2327	4	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_2	17.7826382244655	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGATTGTGCGTCCAATCA	NA	False	NA	-4	True	AATAAA	-22	NA	154486615	154483716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154485650_154485770_154485980_154486227_154486334_154486536
transcript_206948.known	chrX	-	1763	4	FSM	ENSG00000126903.16	ENST00000369649.8	1763	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	47.8632310744781	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCCTTCTACTCTTTGCC	NA	False	NA	-1	True	AATAAA	-18	NA	154490614	154487305	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154488497_154488583_154489083_154490306_154490359_154490593
transcript_206955.known	chrX	-	1862	3	FSM	ENSG00000126903.16	ENST00000393587.4	1862	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	51.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAATATATTTCAATAAA	NA	False	NA	-38	True	NA	NA	NA	154490663	154487342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154489083_154490306_154490359_154490593
transcript_206956.nnic	chrX	-	2021	3	NNC	ENSG00000126903.16	novel	2095	2	NA	NA	-2	0	intron_retention	FALSE	non_canonical	0	0	junction_2	53	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGGTCCCTTCTACTCT	NA	False	NA	-6	True	AATAAA	-13	NA	154490692	154487310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_-_154489083_154490306_154490383_154490519
transcript_20696.known	chr1	+	2061	3	FSM	ENSG00000135750.15	ENST00000366621.8	2061	3	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	13	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTATGCTTTCATATATCA	233613143	True	NA	17	True	AATAAA	-23	NA	233614105	233672514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_233614527_233666594_233666991_233671270
transcript_206961.known	chrX	-	1815	11	FSM	ENSG00000071889.17	ENST00000322269.10	1815	11	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_8	34.0293990543471	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCTGTTGTCAGTGCGG	NA	False	NA	0	True	AATAAA	-29	NA	154516242	154506159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507862_154508288_154508348_154508473_154508598_154511847_154511872_154512313_154512412_154512822_154512937_154515759_154515813_154515909
transcript_206964.known	chrX	-	1901	10	FSM	ENSG00000071889.17	ENST00000621967.4	1901	10	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_8	33.4313374094973	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGCCTTCAGATGCTGT	NA	False	NA	-11	True	AATAAA	-18	NA	154516242	154506170	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507862_154508288_154508348_154508473_154508598_154511847_154511872_154512313_154512412_154512822_154512937_154515759
transcript_206966.known	chrX	-	1712	10	FSM	ENSG00000071889.17	ENST00000359889.9	1712	10	0	0	0	0	multi-exon	TRUE	canonical	3	38	junction_9	20.418461750262	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTGTTGTCAGTGCGGA	NA	False	NA	1	True	AATAAA	-30	NA	154516236	154506158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507862_154508288_154508348_154508473_154508598_154511847_154511872_154512822_154512937_154515759_154515813_154515909
transcript_206970.nic	chrX	-	1925	10	NIC	ENSG00000071889.17	novel	1901	10	NA	NA	-3	0	intron_retention	FALSE	canonical	2	10	junction_8	39.1618988429782	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGCCTTCAGATGCTGT	NA	False	NA	-11	True	AATAAA	-18	NA	154516245	154506170	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507883_154508288_154508348_154508473_154508598_154511847_154511872_154512313_154512412_154512822_154512937_154515759
transcript_206971.known	chrX	-	1359	10	FSM	ENSG00000071889.17	ENST00000369641.7	1359	10	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	31.3514526018638	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTCCATTCCTCACGCC	NA	False	NA	NA	False	NA	NA	NA	154516238	154506534	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507883_154508288_154508348_154508473_154508598_154511847_154511872_154512822_154512937_154515759_154515813_154515909
transcript_206973.known	chrX	-	1793	9	FSM	ENSG00000071889.17	ENST00000447601.7	1793	9	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_7	11.1908165475089	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGCCTTCAGATGCTGT	NA	False	NA	-11	True	AATAAA	-18	NA	154516232	154506170	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507862_154508288_154508348_154508473_154508598_154511847_154511872_154512822_154512937_154515759
transcript_206974.known	chrX	-	1041	9	FSM	ENSG00000071889.17	ENST00000393572.5	1041	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_7	34.4564943080401	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATGGGGGCTGCAGGGGG	NA	False	NA	NA	False	GGGGCT	-40	NA	154516160	154506639	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507862_154508288_154508348_154508473_154508598_154511847_154511872_154515759_154515813_154515909
transcript_206976.nic	chrX	-	1827	9	ISM	ENSG00000071889.17	ENST00000369641.7	1359	10	-7	-364	-3	0	intron_retention	FALSE	canonical	2	11	junction_4	29.5930735139154	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGCCTTCAGATGCTGT	NA	False	NA	-11	True	AATAAA	-18	NA	154516245	154506170	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507883_154508288_154508348_154508473_154508598_154511847_154511872_154512822_154512937_154515759
transcript_206978.known	chrX	-	1817	9	FSM	ENSG00000071889.17	ENST00000434658.6	1817	9	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_7	40.0419701688116	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACCCCTTAATAAAGTGA	NA	False	NA	-44	True	NA	NA	NA	154516242	154506203	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154508288_154508348_154508473_154508598_154511847_154511872_154512313_154512412_154512822_154512937_154515759
transcript_206986.known	chrX	-	1763	8	FSM	ENSG00000071889.17	ENST00000419205.5	1763	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	30.1587635755872	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCTGTTGTCAGTGCGG	NA	False	NA	0	True	AATAAA	-29	NA	154516242	154506159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154508288_154508348_154508473_154508598_154511847_154511872_154512822_154512937_154515759
transcript_206996.known	chrX	-	1661	13	FSM	ENSG00000160211.19	ENST00000393564.6	1661	13	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_12	15.7762127549323	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGGGCACCCACCTCCA	NA	False	NA	NA	False	NA	NA	NA	154547572	154531999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154532091_154532187_154532281_154532385_154532463_154532566_154532803_154532941_154533129_154533575_154533670_154534034_154534161_154534337_154534497_154535167_154535386_154535936_154536046_154536140_154536179_154546035_154546164_154547467
transcript_207.known	SIRV6	+	574	8	FSM	SIRV6A	SIRV602	574	8	0	0	0	0	multi-exon	FALSE	canonical	3	10205	junction_3	6778.77356916727	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTGCCTAATTGTTGGT	NA	False	NA	NA	False	NA	NA	NA	1124	11279	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV6_+_1187_1468_1535_1640_1736_2780_2829_3106_3165_10724_10819_11031_11109_11205
transcript_20700.known	chr1	+	697	3	FSM	ENSG00000168275.16	ENST00000619305.1	697	3	0	0	0	0	multi-exon	TRUE	canonical	3	655	junction_2	4.5	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTGTTTTGTTTTTGTT	234365152	True	NA	15	True	AGTAAA	-20	NA	234373467	234384048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_234373679_234374229_234374390_234383722
transcript_207002.known	chrX	+	1949	10	FSM	ENSG00000269335.7	ENST00000617207.4	1949	10	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_3	39.3430621991969	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGCATTAGTCGTGC	154546332	True	NA	NA	False	AGTAAA	-3	NA	154547640	154565033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154547746_154551987_154552190_154556164_154556377_154558534_154558651_154560406_154560560_154561687_154561785_154562809_154562954_154563558_154563702_154563958_154564021_154564318
transcript_207006.known	chrX	+	2103	10	FSM	ENSG00000269335.7	ENST00000611071.4	2103	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	41.8324110861895	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGTGCGTATCTTTGGCAT	154547824	False	NA	NA	False	AGTAAA	-16	NA	154547846	154565046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154548090_154551987_154552190_154556164_154556377_154558531_154558651_154560406_154560560_154561687_154561785_154562809_154562954_154563558_154563702_154563958_154564021_154564318
transcript_207020.known	chrX	-	2223	13	FSM	ENSG00000160211.19	ENST00000393562.10	2223	13	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_12	7.77951369516973	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGTCCCCTTGTCATT	NA	False	NA	-7	True	ATTAAA	-14	NA	154546846	154531390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154532091_154532187_154532281_154532385_154532463_154532566_154532803_154532941_154533129_154533575_154533670_154534034_154534161_154534337_154534497_154535167_154535386_154535936_154536046_154536140_154536179_154546035_154546164_154546788
transcript_207026.known	chrX	+	2469	15	FSM	ENSG00000130826.18	ENST00000369550.10	2469	15	0	0	0	0	multi-exon	FALSE	canonical	3	1038	junction_7	74.0279869856182	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTTATGTTTGTTTTCT	154751495	True	NA	24	True	ATTAAA	-36	NA	154762863	154777689	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154762982_154764898_154764967_154765443_154765531_154765906_154765999_154766215_154766401_154766996_154767062_154767255_154767383_154768301_154768433_154769166_154769311_154770758_154770880_154773130_154773250_154774601_154774706_154775194_154775274_154776186_154776325_154776798
transcript_20703.known	chr1	+	641	3	FSM	ENSG00000168275.16	ENST00000366613.1	641	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	313.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACTTTTGTTTTGTTTTT	234373668	False	NA	12	True	AGTAAA	-17	NA	234373682	234384045	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_234373841_234374229_234374390_234383722
transcript_207030.nic	chrX	+	1678	14	ISM	ENSG00000130826.18	ENST00000369550.10	2469	15	-164	1429	-42	0	5prime_fragment	FALSE	canonical	3	1038	junction_7	76.1205055221439	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGTAAGAAGGACAAGA	NA	False	NA	28	True	NA	NA	NA	154762699	154776260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_+_154762982_154764898_154764967_154765443_154765531_154765906_154765999_154766215_154766401_154766996_154767062_154767255_154767383_154768301_154768433_154769166_154769311_154770758_154770880_154773130_154773250_154774601_154774706_154775194_154775274_154776186
transcript_207032.known	chrX	+	3079	14	FSM	ENSG00000130826.18	ENST00000620277.4	3079	14	0	0	0	0	multi-exon	FALSE	canonical	3	1038	junction_7	76.6275863005518	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTTTATGTTTGTTTTC	154762543	True	NA	23	True	ATTAAA	-35	NA	154762741	154777688	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154762982_154764898_154764967_154765443_154765531_154765906_154765999_154766215_154766401_154766996_154767062_154767255_154767383_154768301_154768433_154769166_154769311_154770758_154770880_154773130_154773250_154774601_154775274_154776186_154776325_154776798
transcript_20705.known	chr1	+	1013	2	FSM	ENSG00000168275.16	ENST00000366612.1	1013	2	0	0	0	0	multi-exon	FALSE	canonical	3	655	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTTTGTTTTGTTTTTG	234373686	False	NA	13	True	AGTAAA	-18	NA	234373700	234384046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_234374390_234383722
transcript_207055.known	chrX	+	587	2	FSM	ENSG00000130826.18	ENST00000475423.1	587	2	0	0	0	0	multi-exon	FALSE	canonical	3	1205	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAGGCATACATTTCC	154751483	True	NA	NA	False	NA	NA	NA	154762851	154765355	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154762982_154764898
transcript_207056.known	chrX	-	2195	13	FSM	ENSG00000130830.15	ENST00000413259.7	2195	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	29.8882176711084	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACCTTGTAACTCTGGG	NA	False	NA	-2	True	AATAAA	-20	NA	154805527	154778685	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154779354_154781238_154781314_154781599_154781803_154783426_154783508_154784027_154784109_154785050_154785158_154786203_154786401_154789953_154790023_154790982_154791069_154791768_154791848_154792141_154792286_154799744_154799894_154805271
transcript_207059.known	chrX	-	2006	12	FSM	ENSG00000130830.15	ENST00000369534.8	2006	12	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_10	13.4490160628148	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTTGTAACTCTGGGTT	NA	False	NA	0	True	AATAAA	-22	NA	154805485	154778683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154779354_154781238_154781314_154781599_154781803_154783426_154783508_154784027_154784109_154785050_154785158_154786203_154786401_154789953_154790023_154790982_154791069_154791768_154791848_154792141_154792286_154805271
transcript_20706.known	chr1	-	5206	30	FSM	ENSG00000059588.10	ENST00000040877.2	5206	30	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_20	24.722767239454	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTCCTAGAAACGCCT	-234478610	True	NA	-3	True	AATAAA	-24	NA	234479179	234391312	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_234391746_234392415_234392553_234393361_234393487_234393645_234393838_234398381_234398554_234401180_234401263_234405902_234406100_234410444_234410532_234418083_234418234_234420701_234420813_234425672_234425794_234427316_234427389_234427575_234427767_234429135_234429325_234429415_234429678_234430086_234430302_234433409_234433572_234437274_234437373_234446802_234446976_234448479_234448580_234450427_234450567_234457666_234457757_234459229_234459327_234460260_234460397_234463836_234463935_234465655_234465709_234467501_234467651_234471187_234471258_234472713_234472812_234478172
transcript_207060.nic	chrX	-	2340	12	NIC	ENSG00000130830.15	novel	2006	12	NA	NA	-514	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_11	23.6454527978749	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTTGTAACTCTGGGTT	NA	False	NA	0	True	AATAAA	-22	NA	154821521	154778683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrX_-_154779354_154781238_154781314_154781599_154781803_154783426_154783508_154784027_154784109_154785050_154785158_154786203_154786401_154789953_154790023_154790982_154791069_154791768_154791848_154792141_154792286_154820973
transcript_207066.known	chrX	-	791	6	FSM	ENSG00000185010.15	ENST00000423959.5	791	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	1.67332005306815	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTCTCTGCCAGGTATGT	NA	False	NA	NA	False	NA	NA	NA	155026940	154984700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_154984804_154987236_154987306_154992935_154993149_154996972_154997096_154999478_154999601_155026779
transcript_207068.known	chrX	+	1707	1	FSM	ENSG00000288722.1	ENST00000610495.2	1707	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGTTTTGGTGTCCGT	154886311	False	NA	NA	False	GATAAA	-20	NA	154886354	154888061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_154886400_154888100
transcript_207069.known	chrX	+	666	5	FSM	ENSG00000165775.18	ENST00000484175.5	666	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	209.679964469665	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCATGTTCATTGTTCCTG	155027019	False	NA	NA	False	NA	NA	NA	155027152	155054681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_155027373_155033402_155033554_155046508_155046585_155051669_155051802_155054594
transcript_207070.known	chrX	+	871	5	FSM	ENSG00000165775.18	ENST00000456179.1	871	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	247.51717112152	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATTTTGGTATCTTGGT	155033292	False	NA	-3	True	AATACA	-17	NA	155033425	155055106	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_155033554_155046508_155046585_155047368_155047392_155051669_155051802_155054594
transcript_207073.known	chrX	+	2846	12	FSM	ENSG00000185515.16	ENST00000369462.5	2846	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	114.665377339154	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATTATTGTCAATGTCT	155067456	True	NA	20	True	AATAAA	-23	NA	155071502	155123074	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_155071651_155072326_155072344_155073376_155073432_155077169_155077290_155078615_155078704_155089262_155089352_155090783_155090840_155099314_155099390_155116056_155116189_155116710_155116755_155119998_155120169_155121222
transcript_207080.known	chrX	+	2769	11	FSM	ENSG00000185515.16	ENST00000330045.12	2769	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	87.9946021071747	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATTGTCAATGTCTTGG	155067461	True	NA	23	True	AATAAA	-26	NA	155071507	155123077	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_155071651_155072326_155072344_155073376_155073432_155077169_155077290_155078615_155078704_155089262_155089352_155090783_155090840_155116056_155116189_155116710_155116755_155119998_155120169_155121222
transcript_207088.known	chrX	+	2641	10	FSM	ENSG00000185515.16	ENST00000369459.6	2641	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	118.778765197018	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATATTATTGTCAATGT	155067452	True	NA	18	True	AATAAA	-21	NA	155071498	155123072	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_155071651_155072326_155072344_155073376_155073432_155077169_155077290_155078615_155078704_155089262_155089352_155090783_155090840_155116710_155116755_155119998_155120169_155121222
transcript_207092.known	chrX	-	881	3	FSM	ENSG00000182712.16	ENST00000369484.8	881	3	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	26	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGTTTTGTACTAAATG	NA	False	NA	0	True	AATAAA	-18	NA	155071136	155061621	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_155061992_155063965_155064034_155070693
transcript_207094.known	chrX	+	954	11	NNC	ENSG00000185515.16	novel	2846	12	NA	NA	-4	-1168	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	129.963110150535	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGGAGACAAAATGGGGT	155067481	True	NA	-5	True	AAGAAA	-39	NA	155071527	155120150	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrX_+_155071651_155072326_155072344_155073376_155073432_155077169_155077284_155078609_155078704_155089262_155089352_155090783_155090840_155099314_155099390_155116056_155116189_155116710_155116755_155119995
transcript_207095.known	chrX	+	1616	6	FSM	ENSG00000155959.12	ENST00000286428.7	1616	6	0	0	0	0	multi-exon	FALSE	canonical	3	599	junction_3	40.7057735462674	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTGTCTTACTATGTTT	155211594	True	NA	34	True	ATTAAA	-43	NA	155216459	155239841	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_155216576_155220182_155220308_155227234_155227302_155228383_155228483_155236228_155236368_155238771
transcript_207099.known	chrX	-	3413	2	FSM	ENSG00000155961.5	ENST00000369454.4	3413	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCCAAGTGTGTGTTATA	NA	False	NA	-6	True	AGTAAA	-23	NA	155264491	155258234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_155261230_155264073
transcript_20710.known	chr1	-	1650	8	FSM	ENSG00000059588.10	ENST00000462259.5	1650	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	54.2631532065578	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTTCCTTTAATAAAATAT	NA	False	NA	1	True	AATAAA	-20	NA	234406380	234391377	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_234391746_234392415_234392553_234393361_234393487_234393645_234393838_234398381_234398554_234400852_234400949_234401180_234401263_234405902
transcript_207104.known	chrX	-	3952	8	FSM	ENSG00000185973.12	ENST00000334398.8	3952	8	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	30.6007869713396	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCACCAGAAGTTACCACAT	NA	False	NA	NA	False	AATAAA	-24	NA	155612952	155489010	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_155491667_155492356_155492496_155506897_155507135_155511672_155511793_155513985_155514266_155524455_155524633_155545095_155545278_155612791
transcript_207110.nic	chrX	-	1708	7	ISM	ENSG00000185973.12	ENST00000334398.8	3952	8	-24	2958	-24	-520	5prime_fragment	FALSE	canonical	3	44	junction_1	27.0287912337114	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATTATCTGATTTACTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	155612976	155491968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_155492496_155506897_155507135_155511672_155511793_155513985_155514266_155524455_155524633_155545095_155545278_155612791
transcript_207111.known	chrX	-	1248	7	FSM	ENSG00000185973.12	ENST00000369439.4	1248	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	32.5819479671387	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTTTGAGATCTTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	155612877	155492534	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_155492701_155506897_155507135_155511672_155511793_155513985_155514266_155524455_155524633_155545095_155545278_155612791
transcript_207114.nic	chrX	-	729	3	ISM	ENSG00000185973.12	ENST00000369439.4	1248	7	-99	31736	-24	0	5prime_fragment	FALSE	canonical	3	109	junction_1	11	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTATACTTAATAGTGAGA	NA	False	NA	NA	False	AATAAA	-22	NA	155612976	155524270	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrX_-_155524633_155545095_155545278_155612791
transcript_207115.known	chrX	-	544	2	FSM	ENSG00000185973.12	ENST00000487422.1	544	2	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTATACTTAATAGTGAGA	NA	False	NA	NA	False	AATAAA	-22	NA	155545277	155524270	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_-_155524633_155545095
transcript_207119.known	chrX	+	2594	8	FSM	ENSG00000124333.16	ENST00000286448.12	2594	8	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_2	23.7770254400232	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTGTTTTAGAAGTTC	155879010	True	NA	NA	False	AATAAA	-21	NA	155881344	155943769	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_155881449_155889457_155889613_155895622_155895681_155898111_155898250_155900496_155900588_155919812_155919881_155939700_155939794_155941882
transcript_207120.known	chrX	+	742	8	FSM	ENSG00000124333.16	ENST00000479687.6	742	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	80.2050942450487	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGGTGGATTTACATG	155879023	True	NA	NA	False	NA	NA	NA	155881357	155941909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_155881449_155889457_155889634_155895622_155895681_155898111_155898250_155900496_155900588_155919812_155919881_155939700_155939794_155941882
transcript_207121.known	chrX	+	658	7	FSM	ENSG00000124333.16	ENST00000460621.6	658	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	86.8531647219733	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGGAGTTAAAAGCAATCC	155879043	True	NA	NA	False	AAGAAA	-42	NA	155881377	155941989	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_155881449_155889457_155889548_155898111_155898250_155900496_155900588_155919812_155919881_155939700_155939794_155941882
transcript_207122.known	chrX	+	2496	7	FSM	ENSG00000124333.16	ENST00000262640.11	2496	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_5	86.3249674196289	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTGTTTTAGAAGTTC	155879040	True	NA	NA	False	AATAAA	-21	NA	155881374	155943769	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_155881449_155889457_155889613_155895622_155895681_155898111_155898250_155900496_155900588_155939700_155939794_155941882
transcript_207123.known	chrX	+	696	7	FSM	ENSG00000124333.16	ENST00000488344.6	696	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	85.0588031893231	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATAGGAAAGAAGAAGTT	155879025	True	NA	NA	False	NA	NA	NA	155881359	155941944	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrX_+_155881449_155889457_155889613_155898111_155898250_155900496_155900588_155919812_155919881_155939700_155939794_155941882
transcript_207125.known	chrY	-	828	1	FSM	ENSG00000184895.8	ENST00000383070.2	828	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTACTGGTATTTCATTT	NA	False	NA	-11	True	AATAAA	-17	NA	2787682	2786854	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_-_2786900_2787700
transcript_207129.known	chrY	+	1189	7	FSM	ENSG00000129824.16	ENST00000250784.13	1189	7	0	0	0	0	multi-exon	FALSE	canonical	3	1142	junction_1	324.254015652338	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTCCCTTTTTCCTTGCT	2827547	True	NA	8	True	ATTAAA	-19	NA	2841601	2867268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_+_2841628_2842164_2842243_2844076_2844258_2845645_2845744_2854599_2854772_2865087_2865246_2866792
transcript_207131.known	chrY	+	811	7	FSM	ENSG00000129824.16	ENST00000430575.1	811	7	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	692.813045970316	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGCTGGCCACCAAACAG	2841896	False	NA	-28	True	NA	NA	NA	2841919	2866862	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_+_2841974_2842164_2842243_2844076_2844258_2845645_2845744_2854599_2854772_2865087_2865246_2866792
transcript_207137.known	chrY	+	5113	8	FSM	ENSG00000067646.12	ENST00000383052.5	5113	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	7.43955232359516	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCAATACTAAGTTAACTC	2935263	True	NA	25	True	AATAAA	-41	NA	2935280	2982506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_+_2935447_2953908_2953998_2961073_2961647_2975094_2975245_2975510_2975655_2976669_2976823_2977939_2978081_2978809
transcript_207138.known	chrY	+	5336	8	FSM	ENSG00000067646.12	ENST00000155093.8	5336	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	7.43955232359516	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCAATACTAAGTTAACTC	2934693	True	NA	25	True	AATAAA	-41	NA	2935380	2982506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_+_2935770_2953908_2953998_2961073_2961647_2975094_2975245_2975510_2975655_2976669_2976823_2977939_2978081_2978809
transcript_207139.nic	chrY	+	1496	7	ISM	ENSG00000067646.12	ENST00000383052.5	5113	8	-112	4458	-112	-5	5prime_fragment	FALSE	canonical	3	14	junction_1	8	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGACCTGATTCCAGGC	2935127	True	NA	NA	False	AAGAAA	-3	NA	2935168	2978048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrY_+_2935447_2953908_2953998_2961073_2961647_2975094_2975245_2975510_2975655_2976669_2976823_2977939
transcript_207142.known	chrY	+	4824	7	FSM	ENSG00000099715.14	ENST00000622698.4	4824	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	17.7169096878911	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTCTAAAAAATACAAAAAT	4998929	True	NA	NA	False	NA	NA	NA	5000295	5105459	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_+_5000606_5030898_5031068_5031905_5032012_5032669_5032729_5056888_5057460_5098214_5100708_5104343
transcript_207146.nnic	chrY	+	2956	3	NIC	ENSG00000099715.14	novel	4824	7	NA	NA	0	-1148	combination_of_known_splicesites	FALSE	canonical	1	6	junction_1	4.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGAAGCATTCCCCTA	4998929	True	NA	NA	False	AAAAAG	-6	NA	5000295	5100289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrY_+_5000606_5056888_5057460_5098214
transcript_207147.nic	chrY	+	1879	2	ISM	ENSG00000099715.14	ENST00000620615.4	329	3	-94	27691	0	-27691	5prime_fragment	FALSE	canonical	3	49	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCTCCTTGGCCTTT	4998929	True	NA	NA	False	AATAAA	-28	NA	5000295	5004256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrY_+_5000606_5002687
transcript_207148.nic	chrY	+	4241	2	ISM	ENSG00000099715.14	ENST00000620615.4	329	3	-94	25329	0	-25329	5prime_fragment	FALSE	canonical	3	49	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTAATTGGATTGACTTT	4998929	True	NA	0	True	AATAAA	-12	NA	5000295	5006618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrY_+_5000606_5002687
transcript_20715.known	chr1	-	5316	2	FSM	ENSG00000168264.11	ENST00000366609.4	5316	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTCTGAGGCCTTTTTT	-234605093	True	NA	-6	True	AATAAA	-22	NA	234610178	234604268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_234607853_234608446
transcript_207157.nic	chrY	+	686	5	NIC	ENSG00000114374.13	novel	2417	9	NA	NA	-66	-176	combination_of_known_junctions	FALSE	canonical	3	26	junction_4	233.645564905478	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTTAAAAATGACAACC	NA	False	NA	NA	False	NA	NA	NA	12662267	12708693	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrY_+_12662707_12664639_12664687_12686512_12686607_12702009_12702056_12708633
transcript_207158.known	chrY	+	5284	4	FSM	ENSG00000114374.13	ENST00000440408.5	5284	4	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_3	156.629073503825	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAGTGTCTAAAGCAGTG	NA	False	NA	NA	False	AATAAA	-44	NA	12662333	12692233	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_+_12662707_12664639_12664687_12686512_12686607_12687463
transcript_207160.nic	chrY	+	626	4	ISM	ENSG00000114374.13	ENST00000651177.1	9640	48	-100	158747	-66	-6814	5prime_fragment	FALSE	canonical	3	146	junction_3	189.195372271335	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTTGCTAGCTGAAGAA	NA	False	NA	NA	False	NA	NA	NA	12662267	12702055	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chrY_+_12662707_12664639_12664687_12686512_12686607_12702009
transcript_207164.known	chrY	+	2410	2	FSM	ENSG00000114374.13	ENST00000471409.1	2410	2	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTCCTGTGGTGTGTT	12856802	False	NA	11	True	AATAAA	-12	NA	12856812	12860839	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_+_12857662_12859278
transcript_207166.known	chrY	+	4408	17	FSM	ENSG00000067048.17	ENST00000336079.8	4408	17	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_9	52.2673042517978	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTGTCACTTGTAGC	12891822	True	NA	18	True	AATAAA	-14	NA	12904867	12920478	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_+_12904982_12907536_12907595_12909359_12909408_12911838_12911969_12912726_12912883_12912962_12913063_12913717_12913854_12914563_12914650_12914883_12914983_12915066_12915228_12915629_12915775_12915882_12916028_12916260_12916443_12916516_12916635_12916906_12917061_12917402_12917543_12918042
transcript_207169.nnic	chrY	+	2424	17	NNC	ENSG00000067048.17	novel	2709	18	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_14	102.892237316525	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGGCACAGAGGTATGAT	12891798	True	NA	15	True	AATAAA	-27	NA	12904843	12918539	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrY_+_12904982_12907536_12907595_12909359_12909408_12911838_12911969_12912726_12912883_12912962_12913063_12913717_12913854_12914563_12914650_12914883_12914983_12915066_12915228_12915629_12915775_12915882_12916028_12916260_12916443_12916516_12916635_12916975_12917061_12917402_12917543_12918042
transcript_207172.nic	chrY	+	2220	17	NIC	ENSG00000067048.17	novel	792	8	NA	NA	-34	-247	combination_of_known_junctions	FALSE	canonical	3	111	junction_1	89.9675071553614	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCAGCCCTATTCAGAAAT	12903421	True	NA	-49	True	AAGAAA	-16	NA	12905703	12918292	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrY_+_12905816_12907536_12907595_12909359_12909408_12911838_12911969_12912726_12912883_12912962_12913063_12913717_12913854_12914563_12914650_12914883_12914983_12915066_12915228_12915629_12915775_12915882_12916028_12916260_12916443_12916516_12916635_12916906_12917061_12917402_12917543_12918042
transcript_207173.nic	chrY	+	2467	17	NIC	ENSG00000067048.17	novel	792	8	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	111	junction_1	89.9675071553614	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGGCACAGAGGTATGAT	12903421	True	NA	15	True	AATAAA	-27	NA	12905703	12918539	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrY_+_12905816_12907536_12907595_12909359_12909408_12911838_12911969_12912726_12912883_12912962_12913063_12913717_12913854_12914563_12914650_12914883_12914983_12915066_12915228_12915629_12915775_12915882_12916028_12916260_12916443_12916516_12916635_12916906_12917061_12917402_12917543_12918042
transcript_207174.nic	chrY	+	4406	17	NIC	ENSG00000067048.17	novel	792	8	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	111	junction_1	89.9675071553614	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTGTCACTTGTAGC	12903421	True	NA	18	True	AATAAA	-14	NA	12905703	12920478	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrY_+_12905816_12907536_12907595_12909359_12909408_12911838_12911969_12912726_12912883_12912962_12913063_12913717_12913854_12914563_12914650_12914883_12914983_12915066_12915228_12915629_12915775_12915882_12916028_12916260_12916443_12916516_12916635_12916906_12917061_12917402_12917543_12918042
transcript_20720.known	chr1	-	3283	5	FSM	ENSG00000173726.11	ENST00000366607.5	3283	5	0	0	0	0	multi-exon	FALSE	canonical	3	783	junction_1	69.5678625516122	274	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGCTTGGCGTATGTTT	-235113295	True	NA	-22	True	ATTAAA	-15	NA	235128837	235109340	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_235112109_235113767_235113911_235119817_235119900_235122325_235122373_235128594
transcript_207206.known	chrY	-	4179	29	FSM	ENSG00000183878.16	ENST00000682913.1	4179	29	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	14.5020670588572	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAGTTCCATGAATATTAA	NA	False	NA	NA	False	NA	NA	NA	13479665	13249855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_-_13249883_13251016_13251188_13260277_13260405_13297706_13297849_13298956_13299145_13302876_13302992_13305398_13305548_13306037_13306113_13306185_13306251_13323554_13323761_13324600_13324707_13326220_13326351_13335562_13336336_13355002_13355399_13355922_13356019_13357876_13357970_13359087_13359223_13359766_13359987_13360429_13360529_13366266_13366394_13369255_13369350_13393858_13393894_13396917_13396973_13410992_13411114_13414734_13414794_13449016_13449067_13470120_13470230_13479253_13479318_13479513
transcript_207207.known	chrY	-	4571	28	FSM	ENSG00000183878.16	ENST00000682216.1	4571	28	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_16	13.5917347594886	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTCCACGTTCCTCATT	NA	False	NA	0	True	AATAAA	-27	NA	13479969	13234576	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_-_13234827_13251016_13251188_13260277_13260405_13297706_13297849_13298956_13299145_13302876_13302992_13305398_13305548_13306037_13306113_13306185_13306251_13323554_13323761_13324600_13324707_13326220_13326351_13335562_13336336_13355002_13355399_13355922_13356019_13357876_13357970_13359766_13359987_13360429_13360529_13366266_13366394_13369255_13369350_13393858_13393894_13396917_13396973_13410992_13411114_13414734_13414794_13449016_13449067_13470120_13470230_13479253_13479318_13479513
transcript_207209.known	chrY	-	6529	28	FSM	ENSG00000183878.16	ENST00000331397.8	6529	28	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_16	14.6219858136917	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGAAGCATTTTTATT	NA	False	NA	0	True	NA	NA	NA	13480673	13248378	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_-_13249883_13251016_13251188_13260277_13260405_13297706_13297849_13298956_13299145_13302876_13302992_13305398_13305548_13306037_13306113_13306185_13306251_13323554_13323761_13324600_13324707_13326220_13326351_13335562_13336336_13355002_13355399_13355922_13356019_13357876_13357970_13359766_13359987_13360429_13360529_13366266_13366394_13369255_13369350_13393858_13393894_13396917_13396973_13410992_13411114_13414734_13414794_13449016_13449067_13470120_13470230_13479253_13479318_13479513
transcript_207216.known	chrY	-	1539	7	FSM	ENSG00000183878.16	ENST00000382893.2	1539	7	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	8.04155872120988	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGAGTCTATAATTGAAT	NA	False	NA	NA	False	ATTAAA	-26	NA	13479978	13396301	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_-_13396973_13410992_13411114_13414734_13414794_13449016_13449067_13470120_13470230_13479253_13479318_13479513
transcript_207218.known	chrY	-	686	2	FSM	ENSG00000183878.16	ENST00000479713.1	686	2	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGACCGGGCTAAACCGGG	NA	False	NA	NA	False	NA	NA	NA	13479923	13479041	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_-_13479318_13479513
transcript_207226.nnic	chrY	+	970	5	NNC	ENSG00000241859.7	novel	689	6	NA	NA	-5	-66872	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_4	45.2023229491583	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGAGTATTCTTTTCT	13747706	True	NA	14	True	AATAAA	-15	NA	13751650	13791722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrY_+_13752006_13753093_13753160_13754639_13754790_13790918_13790967_13791371
transcript_207228.nnic	chrY	+	1150	5	NNC	ENSG00000241859.7	novel	689	6	NA	NA	-73	-52350	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_4	46.4562966668675	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCTGGAATTGATCATA	13751569	True	NA	NA	False	AATAAA	-19	NA	13751582	13806244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrY_+_13752006_13753093_13753160_13754639_13754790_13790918_13790967_13805781
transcript_207233.nnic	chrY	+	962	3	NNC	ENSG00000154620.6	novel	1337	2	NA	NA	-1005	0	at_least_one_novel_splicesite	FALSE	canonical	3	72	junction_2	1	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTTCTAAGACCTGTAT	13702291	True	NA	7	True	AATAAA	-18	NA	13702893	13706024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrY_+_13702954_13704333_13704436_13705224
transcript_207235.known	chrY	+	1337	2	FSM	ENSG00000154620.6	ENST00000284856.4	1337	2	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTTCTAAGACCTGTAT	13703824	True	NA	7	True	AATAAA	-18	NA	13703898	13706024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_+_13704436_13705224
transcript_207237.known	chrY	-	510	2	FSM	ENSG00000129864.7	ENST00000250825.5	510	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGTGACTCCGTGTTCT	NA	False	NA	NA	False	AATAAA	-21	NA	13986473	13985771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_-_13986147_13986338
transcript_207241.known	chrY	+	7368	7	FSM	ENSG00000165246.15	ENST00000643089.1	7368	7	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_5	6.84754619472471	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATAGTATATAAAGGGTT	NA	False	NA	NA	False	AATAAA	-2	NA	14522572	14845639	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_+_14522942_14622008_14622592_14719458_14719519_14723116_14723270_14824187_14824374_14829729_14830520_14840412
transcript_207266.known	chrY	+	5310	6	FSM	ENSG00000165246.15	ENST00000339174.9	5310	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	26.084478143141	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATATCTCATTTCTACG	14523911	False	NA	NA	False	ATTAAA	-20	NA	14524573	14843647	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_+_14524937_14622008_14622592_14723116_14723270_14824187_14824374_14829729_14830520_14840412
transcript_207267.nic	chrY	+	1246	5	NIC	ENSG00000165246.15	novel	722	4	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_4	22.4555115728856	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTACACATGTTTCTTG	NA	False	NA	9	True	AATAAA	-23	NA	14522589	14733549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chrY_+_14522942_14622008_14622592_14719458_14719519_14723116_14723270_14733451
transcript_207277.known	chrY	+	793	2	FSM	ENSG00000165246.15	ENST00000471252.1	793	2	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTACCACCAGTTTGGA	14521012	True	NA	NA	False	NA	NA	NA	14522637	14622497	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_+_14522942_14622008
transcript_207283.nnic	chrY	-	657	4	NNC	ENSG00000230663.1	novel	2032	5	NA	NA	-106	-22384	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_1	3.2659863237109	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACGGATGCACCTAAAAC	NA	False	NA	NA	False	AATAAA	-20	NA	17579860	17575183	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrY_-_17575368_17576702_17576821_17579315_17579476_17579665
transcript_207286.nnic	chrY	+	642	4	NNC	ENSG00000233522.1	novel	2031	5	NA	NA	-91	-22383	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_3	3.39934634239519	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACGGATGCACCTAAAAC	NA	False	NA	NA	False	AATAAA	-20	NA	18326161	18330827	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chrY_+_18326342_18326530_18326691_18329190_18329309_18330643
transcript_20729.known	chr1	-	5811	23	FSM	ENSG00000054267.22	ENST00000349213.7	5811	23	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	30.2116500981474	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGTTTCTAAAAGATTT	-235324143	True	NA	1	True	AATAAA	-25	NA	235328219	235166894	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_235168653_235172617_235172765_235175183_235175400_235177799_235177914_235181584_235182794_235194012_235194212_235196030_235196116_235219792_235219969_235220301_235220546_235221564_235221663_235223165_235223261_235224702_235224776_235229230_235229386_235231112_235231190_235234412_235234493_235240312_235240452_235246419_235246512_235252729_235252810_235255659_235255751_235257159_235257226_235260641_235260753_235326913_235326969_235327768
transcript_207293.known	chrY	-	615	4	FSM	ENSG00000176728.10	ENST00000670354.1	615	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	21.202725191719	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTATCAGGTGACTG	NA	False	NA	2	True	AATAAA	-17	NA	19076008	18872500	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_-_18872835_18877067_18877206_19068723_19068799_19075940
transcript_207295.known	chrY	-	541	3	FSM	ENSG00000176728.10	ENST00000667262.1	541	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	25.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTTGTATCAGGTGAC	NA	False	NA	0	True	AATAAA	-15	NA	19076011	18872502	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_-_18872835_18877067_18877206_19075940
transcript_207296.known	chrY	-	802	3	FSM	ENSG00000176728.10	ENST00000454875.2	802	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	25.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTATCAGGTGACTG	NA	False	NA	2	True	AATAAA	-17	NA	19077374	18872500	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_-_18872835_18877067_18877206_19077044
transcript_207298.known	chrY	-	515	2	FSM	ENSG00000176728.10	ENST00000331787.2	515	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGACTTTCTGCTTGTATA	NA	False	NA	-17	True	AATAAA	-21	NA	19077416	18932698	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_-_18932842_19077044
transcript_207304.known	chrY	-	3118	4	FSM	ENSG00000215580.12	ENST00000651484.1	3118	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.49691252107735	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACTATTTTGTCTCACAT	NA	False	NA	NA	False	AAAAAG	-35	NA	19567051	19553925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_-_19556813_19557229_19557290_19558039_19558141_19566981
transcript_207313.known	chrY	+	832	4	FSM	ENSG00000131002.13	ENST00000447520.5	832	4	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_2	6.94422221866655	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTCTCTCATGTGGTCCA	19561146	True	NA	NA	False	AATAAA	-20	NA	19567381	19590423	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_+_19567483_19587209_19587508_19589520_19589613_19590082
transcript_207316.nic	chrY	+	782	4	FSM	ENSG00000131002.13	ENST00000686158.1	930	4	-28	176	-6	0	multi-exon	FALSE	canonical	3	78	junction_1	6.54896090146283	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATAATTAAATAAATGCT	19561108	True	NA	-18	True	NA	NA	NA	19567343	19590247	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_+_19567571_19587209_19587508_19589520_19589613_19590082
transcript_207318.known	chrY	+	7299	5	FSM	ENSG00000131002.13	ENST00000253320.8	7299	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	39.0600499231632	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTAGCCTCTGTGTATT	19592432	False	NA	113	True	ACTAAA	-21	NA	19592449	19606274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_+_19592815_19593398_19597666_19599738_19599832_19602215_19602312_19603796
transcript_207323.nic	chrY	+	2005	3	FSM	ENSG00000131002.13	ENST00000693214.1	2569	3	-6	570	-6	0	multi-exon	FALSE	canonical	3	61	junction_2	8.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTAGATCAGCAGTTTT	19561108	True	NA	5	True	AATAAA	-16	NA	19567343	19589849	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_+_19567571_19587209_19587508_19588369
transcript_207325.known	chrY	+	1000	5	FSM	ENSG00000131002.13	ENST00000407724.7	1000	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	40.1520547419432	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATAATTAAATAAATGCT	19561077	True	NA	-18	True	NA	NA	NA	19567312	19590247	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_+_19567483_19587209_19587508_19588369_19588651_19589526_19589613_19590082
transcript_207327.known	chrY	+	1074	1	FSM	ENSG00000131002.13	ENST00000593000.1	1074	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTTATTTGTTTTTATT	19593070	False	NA	13	True	AATAAA	-18	NA	19593087	19594161	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_+_19593100_19594200
transcript_207330.known	chrY	-	6825	27	FSM	ENSG00000012817.16	ENST00000317961.9	6825	27	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_23	19.4465205053067	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGCTGTCTTGGTCTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	19744726	19703864	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_-_19706346_19706440_19706641_19706793_19706864_19707146_19707747_19707933_19708072_19708243_19708424_19708874_19709014_19709450_19709810_19710375_19710473_19715351_19715500_19715614_19715740_19715822_19716005_19716278_19716474_19716595_19716716_19720871_19721035_19721129_19721312_19731771_19731931_19732045_19732166_19732583_19732743_19735351_19735498_19735620_19735751_19739527_19739663_19741317_19741489_19741734_19741858_19743161_19743240_19744384_19744554_19744670
transcript_207336.known	chrY	-	5134	26	FSM	ENSG00000012817.16	ENST00000382806.6	5134	26	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_22	24.9692290629887	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATATGATTTGAACTTC	NA	False	NA	-6	True	AATAAA	-23	NA	19744761	19705419	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_-_19706346_19706440_19706641_19706793_19706864_19707146_19707747_19707933_19708072_19708243_19708424_19708874_19709014_19709450_19709810_19710375_19710473_19715351_19715500_19715614_19715740_19715822_19716005_19716278_19716474_19716595_19716716_19720871_19721035_19721129_19721312_19731771_19731931_19732045_19732166_19732583_19732743_19735351_19735498_19735620_19735751_19739527_19739663_19741734_19741858_19743161_19743240_19744384_19744554_19744670
transcript_20734.known	chr1	-	3463	17	FSM	ENSG00000054267.22	ENST00000474953.5	3463	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	301.798198045896	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTGTTGAGTTTTATA	NA	False	NA	-4	True	AATAAA	-34	NA	235194077	235131633	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_235131998_235135651_235135771_235136033_235136074_235137876_235137941_235138090_235138175_235148403_235148448_235152705_235152766_235154880_235155113_235160510_235160648_235160892_235161068_235161173_235161458_235168543_235168653_235172617_235172765_235175183_235175400_235177799_235177914_235181584_235182794_235194012
transcript_207349.known	chrY	+	1339	7	FSM	ENSG00000198692.10	ENST00000361365.7	1339	7	0	0	0	0	multi-exon	FALSE	canonical	3	408	junction_3	31.8821615048638	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTCTCAGACTGTCTCT	20572890	True	NA	3	True	AATAAA	-14	NA	20575775	20593154	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_+_20575888_20579607_20579692_20582589_20582694_20584473_20584525_20588023_20588106_20589483_20589576_20592340
transcript_20735.known	chr1	-	2315	11	FSM	ENSG00000054267.22	ENST00000466653.1	2315	11	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_3	11.7575507653593	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-235324141	True	NA	NA	False	NA	NA	NA	235328217	235228310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_235229386_235231112_235231190_235234412_235234493_235240312_235240452_235246419_235246512_235252729_235252810_235255659_235255751_235257159_235257226_235260641_235260753_235326913_235326969_235327768
transcript_207351.known	chrY	+	746	6	FSM	ENSG00000198692.10	ENST00000382772.3	746	6	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_3	180.274901192595	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACGTCAAGTAATTGGATA	20572908	True	NA	14	True	AATAAA	-26	NA	20575793	20592630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chrY_+_20575888_20579607_20579692_20582589_20582694_20588023_20588106_20589483_20589576_20592340
transcript_20738.nic	chr1	-	913	7	ISM	ENSG00000054267.22	ENST00000466653.1	2315	11	7	18133	7	-18133	5prime_fragment	FALSE	canonical	3	98	junction_6	8.78287475083693	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAGGAAGAAGATCTAATC	-235324134	True	NA	17	True	AAGAAA	-6	NA	235328210	235246443	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_235246512_235252729_235252810_235255659_235255751_235257159_235257226_235260641_235260753_235326913_235326969_235327768
transcript_20743.known	chr1	-	1847	11	FSM	ENSG00000188739.15	ENST00000408888.8	1847	11	0	0	0	0	multi-exon	FALSE	canonical	3	673	junction_8	40.6674316867933	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTGTGTGCTCAAGTTC	-235149486	True	NA	0	True	ATTAAA	-19	NA	235161250	235131182	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_235131998_235135651_235135771_235136033_235136074_235137876_235137941_235138090_235138175_235148403_235148448_235152705_235152766_235154880_235155113_235160510_235160648_235160892_235161068_235161173
transcript_20746.known	chr1	-	409	4	FSM	ENSG00000188739.15	ENST00000485019.1	409	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	351.66872037315	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAACCTCCGCTTCCCAG	-235149452	True	NA	NA	False	NA	NA	NA	235161216	235160194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_235160249_235160510_235160648_235160892_235161068_235161173
transcript_20748.nic	chr1	+	1895	17	FSM	ENSG00000284770.2	ENST00000642610.2	5374	17	-12	3491	-1	0	multi-exon	FALSE	canonical	3	141	junction_4	20.2614743725623	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTGAACCTACTAATGAT	235363346	True	NA	2	True	AATAAA	-2	NA	235367414	235448952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_235367505_235380018_235380150_235401502_235401588_235414432_235414619_235419472_235419562_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_20750.known	chr1	+	2895	4	FSM	ENSG00000152904.11	ENST00000282841.9	2895	4	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_1	56.7802782663136	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTAAGTAGATTTGTTC	235323305	True	NA	8	True	ATTAAA	-24	NA	235328569	235344532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_235328779_235335241_235335335_235341707_235341779_235342010
transcript_20755.nnic	chr1	+	3208	4	NIC	ENSG00000152904.11	novel	2895	4	NA	NA	-30	0	intron_retention	FALSE	canonical	0	0	junction_1	178.146007533147	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATTTTTATCCATACACT	235328529	False	NA	13	True	AATAAA	-16	NA	235328539	235343093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_235330501_235335241_235335335_235341707_235341779_235342010
transcript_20760.known	chr1	+	1407	3	FSM	ENSG00000152904.11	ENST00000391855.2	1407	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	192	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCCAGTTTCTATTAGC	235323306	True	NA	58	True	NA	NA	NA	235328570	235343138	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_235328779_235341707_235341779_235342010
transcript_20765.known	chr1	+	1897	17	FSM	ENSG00000284770.2	ENST00000646286.1	1897	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	64.6654551808769	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATAATAGCAATAATAAAG	235363361	True	NA	-18	True	NA	NA	NA	235367429	235448932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_235367505_235380018_235380150_235413875_235413998_235414432_235414619_235419472_235419562_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_20766.known	chr1	+	1779	16	FSM	ENSG00000284770.2	ENST00000643142.1	1779	16	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	49.5441441769077	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAATAATAAAGGCTTTGAA	235363361	True	NA	-10	True	NA	NA	NA	235367429	235448940	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_235367505_235380018_235380150_235401502_235401588_235414432_235414619_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_20767.known	chr1	+	1801	16	FSM	ENSG00000284770.2	ENST00000647418.1	1801	16	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	47.8643453476129	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTTTGAACCTACTAATGA	235363354	True	NA	1	True	AATAAA	-1	NA	235367422	235448951	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_235367505_235380018_235380150_235414432_235414619_235419472_235419562_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_20768.known	chr1	+	1683	15	FSM	ENSG00000284770.2	ENST00000366601.8	1683	15	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	50.6653687624667	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAAAGGCTTTGAACCTA	235363361	True	NA	-6	True	NA	NA	NA	235367429	235448944	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_235367505_235380018_235380150_235401502_235401588_235414432_235414619_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_2077.nnic	chr1	-	2912	10	NNC	ENSG00000162408.11	novel	6627	12	NA	NA	-46	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	23.2941469891176	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTAGTTGTGTAATTTT	-6546940	True	NA	-13	True	ATTAAA	-16	NA	6554559	6521349	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_6522619_6532028_6532080_6532462_6532761_6533279_6533442_6541829_6541928_6544825_6544923_6545044_6545181_6549570_6549699_6550395_6550616_6554106
transcript_20772.nnic	chr1	-	3067	14	NNC	ENSG00000162885.14	novel	3862	14	NA	NA	-63	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	83.0450793671762	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCCTTTTTGTATGTATT	NA	False	NA	NA	False	AATAAA	-24	NA	235504515	235447212	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_235448425_235450239_235450341_235453089_235453147_235454155_235454316_235455558_235455685_235458602_235458787_235465635_235465715_235470849_235470961_235480053_235480150_235484321_235484516_235489167_235489269_235494680_235494829_235496185_235496309_235504140
transcript_20773.nic	chr1	-	4905	13	NIC	ENSG00000162885.14	novel	3862	14	NA	NA	-63	0	intron_retention	FALSE	canonical	0	0	junction_11	73.0518746432211	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAGTTAATAGAATTTATA	NA	False	NA	NA	False	AATAAA	-26	NA	235504515	235447189	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_235450341_235453089_235453147_235454155_235454316_235455558_235455685_235458602_235458787_235465635_235465715_235470849_235470961_235480053_235480150_235484321_235484516_235489167_235489269_235494680_235494829_235496185_235496309_235504140
transcript_20774.nnic	chr1	-	2911	13	NNC	ENSG00000162885.14	novel	4719	12	NA	NA	-30	-23	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	61.5487047431183	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCCTTTTTGTATGTATT	-235501581	False	NA	NA	False	AATAAA	-24	NA	235504482	235447212	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_235448425_235450239_235450341_235453089_235453147_235454155_235454316_235455558_235455685_235458602_235458787_235465635_235465715_235470849_235470961_235480053_235480150_235484321_235484516_235489167_235489269_235494680_235494829_235504140
transcript_20776.nic	chr1	-	2129	13	NIC	ENSG00000162885.14	novel	3862	14	NA	NA	-63	-811	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	73.0518746432211	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACCAAGTTATTTTATAAAA	NA	False	NA	NA	False	AAGAAA	-37	NA	235504515	235449965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_235450341_235453089_235453147_235454155_235454316_235455558_235455685_235458602_235458787_235465635_235465715_235470849_235470961_235480053_235480150_235484321_235484516_235489167_235489269_235494680_235494829_235496185_235496309_235504140
transcript_20777.known	chr1	-	4719	12	FSM	ENSG00000162885.14	ENST00000366600.8	4719	12	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_9	32.5225922746706	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAGTTAATAGAATTTATA	-235501551	True	NA	NA	False	AATAAA	-26	NA	235504452	235447189	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_235450341_235453089_235453147_235454155_235454316_235455558_235455685_235458602_235458787_235465635_235465715_235470849_235470961_235480053_235480150_235484321_235484516_235489167_235489269_235494680_235494829_235504140
transcript_2079.nnic	chr1	-	2914	10	NNC	ENSG00000162408.11	novel	6627	12	NA	NA	-46	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	23.2941469891176	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTAGTTGTGTAATTT	-6546940	True	NA	-14	True	ATTAAA	-15	NA	6554559	6521350	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_6522626_6532032_6532080_6532462_6532761_6533279_6533442_6541829_6541928_6544825_6544923_6545044_6545181_6549570_6549699_6550395_6550616_6554106
transcript_20790.known	chr1	-	1874	8	FSM	ENSG00000162885.14	ENST00000313984.3	1874	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	81.7190308312574	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGGTGTAAATTGT	-235501521	True	NA	NA	False	AATAAA	-26	NA	235504422	235464895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_235465715_235470849_235470961_235480053_235480150_235484321_235484516_235489167_235489269_235494680_235494829_235496185_235496309_235504140
transcript_20801.known	chr1	+	2001	4	FSM	ENSG00000284770.2	ENST00000644625.1	2001	4	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	19.2930615046504	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTGACAGAATGAGACTC	235363361	True	NA	NA	False	NA	NA	NA	235367429	235416142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_235367505_235380018_235380150_235401502_235401588_235414432
transcript_20804.known	chr1	-	1869	4	FSM	ENSG00000162885.14	ENST00000494378.1	1869	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	88.5789039344144	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAGGAAAATGCAGA	-235501524	True	NA	NA	False	AATAAA	-22	NA	235504425	235478907	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_235480150_235484321_235484516_235494680_235494829_235504140
transcript_20805.known	chr1	-	4897	4	FSM	ENSG00000168243.11	ENST00000391854.7	4897	4	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_3	16.2138486760204	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGAATCCTACTTTTTTG	-235649766	False	2015	-10	True	AATAAA	-24	NA	235649784	235547684	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_235552238_235583739_235583849_235595399_235595512_235649661
transcript_20806.known	chr1	-	4978	4	FSM	ENSG00000168243.11	ENST00000450593.5	4978	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	214.751536018307	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAAGAATCCTACTTTTT	-235650736	False	NA	-12	True	AATAAA	-22	NA	235650754	235547686	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_235552238_235583739_235583849_235595399_235595512_235650548
transcript_20809.known	chr1	-	5792	20	FSM	ENSG00000116962.15	ENST00000264187.7	5792	20	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_8	14.2492649370603	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCTCTATCTTTTCTGA	-236061576	True	NA	-9	True	AATAAA	-20	NA	236065090	235975829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_235977989_235978994_235979108_235979821_235979946_235980495_235980654_235981610_235981783_235985378_235985506_235990885_235991059_235993644_235993873_236011920_236012044_236013410_236013561_236017147_236017274_236024069_236024214_236025895_236026142_236029549_236029751_236032400_236032653_236038103_236038254_236041909_236042293_236045456_236045684_236048689_236048990_236064854
transcript_20818.known	chr1	-	4994	16	FSM	ENSG00000086619.15	ENST00000354619.10	4994	16	0	0	0	0	multi-exon	TRUE	canonical	1	9	junction_11	8.06804395955633	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATCTTATTTAATTTTTT	-236281261	True	NA	NA	False	ATTAAA	-45	NA	236281958	236215100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_236218577_236220831_236220966_236221923_236222011_236225069_236225140_236226268_236226516_236226646_236226740_236230223_236230251_236232827_236232840_236235788_236235836_236236277_236236399_236243421_236243496_236249884_236249968_236252049_236252092_236253421_236253506_236269874_236269995_236281681
transcript_20821.known	chr1	+	2033	7	FSM	ENSG00000077585.14	ENST00000366592.8	2033	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_6	9.7581874455363	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTGCATAGTTTTTTTT	236141633	True	NA	32	True	ATTAAA	-21	NA	236142538	236208907	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_236143037_236168705_236168756_236178413_236178637_236179878_236180029_236183777_236183907_236205125_236205251_236208049
transcript_20826.known	chr1	+	3116	6	FSM	ENSG00000186197.15	ENST00000359362.6	3116	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	8.93532316147547	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCTTGTTGGTTTATT	236394810	True	NA	22	True	AAAAAG	-45	NA	236395412	236484930	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_236395661_236409215_236409275_236414259_236414300_236427391_236427451_236468230_236468277_236482266
transcript_20834.known	chr1	-	8459	45	FSM	ENSG00000119285.11	ENST00000366582.8	8459	45	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_41	58.7743751087282	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATCTTGCCTCTTCCTGA	-236593482	True	NA	-19	True	CATAAA	-17	NA	236604516	236549004	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_236550991_236551998_236552108_236553580_236553740_236554597_236554753_236555295_236555465_236555550_236555656_236555804_236555940_236556099_236556259_236557194_236557346_236558236_236558530_236558994_236559136_236559713_236559838_236561224_236561272_236564497_236564662_236565918_236566046_236566645_236566877_236568995_236569125_236571350_236571473_236571567_236571687_236572410_236572555_236572724_236572829_236574201_236574334_236574660_236574904_236576218_236576378_236576779_236576950_236581221_236581415_236582735_236582873_236583012_236583197_236585024_236585217_236585819_236585942_236586240_236586453_236587401_236587491_236587947_236588044_236590846_236590955_236591992_236592111_236592522_236592634_236594011_236594115_236595539_236595674_236595832_236596045_236596835_236596977_236597877_236597980_236599482_236599625_236603159_236603377_236603953_236604128_236604421
transcript_20839.nic	chr1	-	3692	25	ISM	ENSG00000119285.11	ENST00000366582.8	8459	45	-12	23730	-12	1261	5prime_fragment	FALSE	canonical	3	293	junction_21	40.0183985464464	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAGCAGAAGTAAGAGCTA	-236593494	True	NA	NA	False	GATAAA	-44	NA	236604528	236572734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_236572829_236574201_236574334_236574660_236574904_236576218_236576378_236576779_236576950_236581221_236581415_236582735_236582873_236583012_236583197_236585024_236585217_236585819_236585942_236586240_236586453_236587401_236587491_236587947_236588044_236590846_236590955_236591992_236592111_236592522_236592634_236594011_236594115_236595539_236595674_236595832_236596045_236596835_236596977_236597877_236597980_236599482_236599625_236603159_236603377_236603953_236604128_236604421
transcript_20840.nic	chr1	-	2669	17	ISM	ENSG00000119285.11	ENST00000366581.6	6538	44	-341	34382	-329	10719	5prime_fragment	FALSE	canonical	3	293	junction_13	41.6135025412425	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCTTGAAAGTGTCATTA	-236604830	True	NA	NA	False	AATAAA	-1	NA	236604845	236585052	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_236585217_236585819_236585942_236586240_236586453_236587401_236587491_236587947_236588044_236590846_236590955_236591992_236592111_236592522_236592634_236594011_236594115_236595539_236595674_236595832_236596045_236596835_236596977_236597877_236597980_236599482_236599625_236603159_236603377_236603953_236604128_236604421
transcript_20842.nic	chr1	+	1399	11	ISM	ENSG00000116977.19	ENST00000450372.6	6281	12	527	4700	-3	0	3prime_fragment	FALSE	canonical	3	20	junction_7	11.6120626935958	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGGTCCTGCTGGGTGTTC	236523391	True	NA	2	True	NA	NA	NA	236523965	236548281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_236524062_236525967_236526116_236537496_236537586_236538878_236539090_236540563_236540684_236541653_236541711_236542760_236542788_236542914_236543041_236543559_236543649_236544749_236544916_236548011
transcript_20844.known	chr1	+	5957	10	FSM	ENSG00000116977.19	ENST00000366584.9	5957	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_7	8.18007214191376	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCTTTGGTCTGTTATA	236523407	True	NA	NA	False	AATAAA	-32	NA	236523981	236552981	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_236524062_236525967_236526116_236537496_236537586_236538878_236539090_236540563_236540684_236541653_236541711_236542760_236542788_236543559_236543649_236544749_236544916_236548011
transcript_20847.known	chr1	-	793	3	FSM	ENSG00000119285.11	ENST00000366579.1	793	3	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_1	38	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTCCCAAGTAGCTGGGA	-236593454	True	NA	NA	False	NA	NA	NA	236604488	236602824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_236603377_236603953_236604128_236604421
transcript_20849.nic	chr1	-	672	2	ISM	ENSG00000119285.11	ENST00000366579.1	793	3	-70	768	-42	-768	5prime_fragment	FALSE	canonical	3	478	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTCCCTGCCACGAAGTA	-236593524	True	NA	NA	False	NA	NA	NA	236604558	236603592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_236604128_236604421
transcript_20850.known	chr1	-	1457	1	FSM	ENSG00000223776.5	ENST00000487567.2	1457	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTCTGTTAGGGACC	-236524474	True	NA	-1	True	NA	NA	NA	236524508	236523051	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_236523100_236524500
transcript_20852.known	chr1	+	4488	19	FSM	ENSG00000077522.15	ENST00000683111.1	4488	19	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_7	5.28333041243055	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTTCTAAATTAAACTTAA	236686315	False	NA	NA	False	ATTAAA	-10	NA	236686681	236764595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_236686800_236717857_236717973_236718893_236719014_236720104_236720192_236725932_236726021_236731232_236731315_236737121_236737215_236739301_236739533_236742895_236743044_236744625_236744777_236747666_236747776_236749123_236749265_236751469_236751653_236753946_236754082_236755018_236755199_236757485_236757633_236759723_236759790_236761014_236761174_236762460
transcript_20853.known	chr1	+	10547	33	FSM	ENSG00000116984.15	ENST00000366577.10	10547	33	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	13.2027459265109	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGATAGATTGTTGAATTT	236792654	True	NA	4	True	ATTAAA	-16	NA	236795291	236903981	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_236795738_236803427_236803643_236806143_236806234_236808703_236808774_236810502_236810596_236812737_236812845_236815603_236815664_236816448_236816544_236824118_236824220_236825337_236825400_236826828_236826897_236829188_236829269_236831965_236832079_236835546_236835688_236838413_236838600_236850343_236850524_236852520_236852638_236852947_236853089_236859832_236859923_236861124_236861278_236862235_236862344_236863453_236863555_236873772_236873841_236874725_236874847_236880754_236880837_236885120_236885220_236886291_236886368_236889180_236889337_236891132_236891330_236894356_236894558_236895357_236895551_236897005_236897119_236897557
transcript_20856.known	chr1	+	3609	31	FSM	ENSG00000116984.15	ENST00000679842.1	3609	31	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	16.43671364828	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTTTTTTTGCCT	236795693	False	NA	NA	False	NA	NA	NA	236795703	236897644	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_236795738_236803427_236803643_236806143_236806234_236808703_236808774_236810502_236810596_236812737_236812845_236815603_236815664_236816448_236816544_236824118_236824220_236825337_236825400_236826828_236826897_236829188_236829269_236831965_236832079_236835546_236835688_236838413_236838600_236850343_236850524_236852520_236852638_236852947_236853089_236859832_236859923_236861124_236861278_236862235_236862344_236863453_236863555_236880754_236880837_236885120_236885220_236886291_236886368_236889180_236889337_236891132_236891330_236894356_236894558_236895357_236895551_236897005_236897119_236897557
transcript_20858.known	chr1	+	10067	32	FSM	ENSG00000116984.15	ENST00000680454.1	10067	32	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_5	13.3614601007889	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGATAACCTAAAATCTGG	236792622	True	NA	-4	True	AATAAA	-11	NA	236795259	236900656	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_236795738_236803427_236803643_236806143_236806234_236808703_236808774_236810502_236810596_236812737_236812845_236815603_236815664_236816448_236816544_236824118_236824220_236825337_236825400_236826828_236826897_236829188_236829269_236831965_236832079_236835546_236835688_236838413_236838600_236850343_236850524_236852520_236852638_236852947_236853089_236859832_236859923_236861124_236861278_236862235_236862344_236863453_236863555_236873772_236873841_236874725_236874847_236880754_236880837_236885120_236885220_236886291_236889337_236891132_236891330_236894356_236894558_236895357_236895551_236897005_236897119_236897557
transcript_20865.known	chr1	+	16583	105	FSM	ENSG00000198626.18	ENST00000366574.7	16583	105	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	4.97418446528419	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCATCCTCTTCTTTCT	237039730	True	NA	6	True	ATTAAA	-14	NA	237042183	237833988	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_237042570_237270496_237270617_237330877_237330983_237355964_237355986_237364357_237364373_237369533_237369609_237374716_237374796_237377322_237377436_237387280_237387381_237388086_237388184_237417048_237417124_237423091_237423249_237441318_237441484_237445400_237445523_237454390_237454575_237456599_237456736_237469091_237469188_237491805_237491925_237492953_237493088_237496510_237496753_237500710_237500904_237503288_237503506_237506709_237506815_237511687_237511792_237530426_237530511_237548430_237548591_237550543_237550692_237566566_237566776_237569144_237569320_237589792_237590002_237590639_237590993_237591738_237591854_237593475_237593637_237595497_237595658_237602024_237602112_237610761_237610989_237614038_237614844_237617285_237617487_237623764_237623871_237625660_237625805_237627806_237628081_237631426_237631542_237633577_237633711_237634888_237634993_237638356_237638493_237639014_237639202_237640896_237641003_237643326_237643448_237648443_237648614_237649876_237650098_237651410_237651502_237654273_237654415_237655820_237655985_237657943_237658023_237659984_237660075_237660809_237660948_237666511_237666590_237667882_237667959_237674095_237674220_237674730_237674847_237678047_237678113_237680455_237680578_237687454_237687505_237698964_237699026_237700228_237700468_237701977_237702060_237705212_237705344_237706948_237707270_237708857_237709099_237709479_237709568_237711744_237711838_237717197_237717369_237718461_237718522_237723127_237723263_237726272_237726309_237727086_237727200_237730259_237730357_237732045_237732150_237733704_237733757_237742295_237742350_237756287_237756388_237757696_237757777_237759775_237759853_237760954_237761029_237770806_237770888_237772011_237772101_237773519_237773649_237778665_237778771_237781564_237781647_237783674_237784973_237785968_237786037_237787987_237788136_237791428_237791516_237792104_237792324_237793866_237793998_237795288_237795332_237798036_237798171_237801855_237801917_237806136_237806284_237808900_237809036_237819035_237819193_237828380_237828446_237830529_237830631_237831513_237831566_237832551
transcript_20874.known	chr1	-	1585	2	FSM	ENSG00000215808.4	ENST00000657655.1	1585	2	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTTGAAATGTGTATGA	-238485102	True	NA	-8	True	AATAAA	-28	NA	238486060	238480372	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_238481682_238485784
transcript_20880.known	chr1	+	2740	7	FSM	ENSG00000133019.12	ENST00000675184.1	2740	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4.76095228569523	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTCAATACCAATTCAGCA	239386928	False	NA	NA	False	AATAAA	-17	NA	239386956	239909396	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_239387228_239492708_239492808_239545640_239545754_239632223_239632287_239678185_239678289_239827251_239827379_239907432
transcript_20885.nnic	chr1	+	2870	6	NIC	ENSG00000133019.12	novel	8780	5	NA	NA	-42	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	4.81663783151692	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTCAATACCAATTCAGCA	NA	False	NA	NA	False	AATAAA	-17	NA	239629030	239909396	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_239629540_239632223_239632287_239678185_239678289_239718795_239718900_239827251_239827379_239907432
transcript_20888.known	chr1	+	8780	5	FSM	ENSG00000133019.12	ENST00000255380.8	8780	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	2.58602010819715	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGTTTGCTTTTATTTA	239628879	True	NA	NA	False	AATAAA	-19	NA	239629072	239915452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_239629540_239632223_239632287_239678185_239678289_239827251_239827379_239907432
transcript_20893.known	chr1	-	2295	17	FSM	ENSG00000182901.18	ENST00000366564.5	2295	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	3.69067659786116	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCTTTTGTAACTTTTGA	-241356877	False	NA	-8	True	ATTAAA	-15	NA	241357085	240775514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_240776214_240802903_240802994_240806139_240806327_240811917_240812044_240813617_240813729_240814715_240814778_240816316_240816416_240827097_240827173_240868586_240868669_240868775_240868853_240870054_240870120_240930716_240930769_240936599_240936707_240983078_240983130_241098665_241098763_241355698_241355827_241356898
transcript_20896.known	chr1	-	1791	10	FSM	ENSG00000091483.8	ENST00000366560.4	1791	10	0	0	0	0	multi-exon	FALSE	canonical	3	508	junction_9	72.9339291735428	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTCCTATGTTAATTGA	-241514336	True	NA	-14	True	AATAAA	-37	NA	241519755	241497602	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_241497971_241500436_241500591_241502442_241502571_241504041_241504246_241506002_241506169_241508602_241508786_241511966_241512144_241513602_241513714_241517181_241517317_241519590
transcript_20898.known	chr1	-	2353	10	FSM	ENSG00000091483.8	ENST00000493477.2	2353	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	193.980398653391	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTTTAATTTTGGAGGTT	-241514275	True	NA	78	True	NA	NA	NA	241519694	241497510	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_241497971_241500436_241500591_241502442_241502571_241504041_241504246_241506002_241506169_241508602_241508786_241511966_241512144_241513602_241513714_241517181_241517317_241519059
transcript_20913.known	chr1	-	2628	4	FSM	ENSG00000054277.14	ENST00000366554.3	2628	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	55.6417109729742	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAGTATGATATTAATAGC	-241636562	True	NA	NA	False	AATAAA	-19	NA	241640369	241593123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_241594692_241597745_241597998_241604259_241604580_241639881
transcript_20914.known	chr1	-	1961	4	FSM	ENSG00000054277.14	ENST00000469376.5	1961	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	66.6399946645323	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCTTTTGTTATAGGGG	-241636533	True	NA	2	True	AATAAA	-26	NA	241640340	241593601	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_241594692_241597745_241597998_241604419_241604580_241639881
transcript_20915.nnic	chr1	-	2125	4	NIC	ENSG00000054277.14	novel	1816	3	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_3	72.6192505851965	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCTTTTGTTATAGGGG	-241636583	True	NA	2	True	AATAAA	-26	NA	241640390	241593601	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_241594692_241597745_241597998_241600379_241600654_241639881
transcript_20918.known	chr1	-	1816	3	FSM	ENSG00000054277.14	ENST00000490673.5	1816	3	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	36.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCTTTTGTTATAGGGG	-241636548	True	NA	2	True	AATAAA	-26	NA	241640355	241593601	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_241594692_241597745_241597998_241639881
transcript_20920.known	chr1	-	920	2	FSM	ENSG00000203668.3	ENST00000638121.1	920	2	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATGAAACAGAAGAAGCCAT	-241636447	False	NA	NA	False	AAGAAA	-27	NA	241640254	241635526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_241636074_241639881
transcript_20921.known	chr1	-	705	2	FSM	ENSG00000203668.3	ENST00000638018.1	705	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTGCTACGCCAGTCAG	-241636447	False	NA	NA	False	NA	NA	NA	241640254	241635465	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_241635798_241639881
transcript_20930.nic	chr1	+	3362	16	NIC	ENSG00000174371.17	novel	3192	14	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	46.4440404022829	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTGGGTTGTGGTTTTTT	NA	False	NA	16	True	AATACA	-19	NA	241847947	241889746	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_241848201_241848730_241849028_241849108_241849217_241850408_241850587_241852291_241852412_241853357_241853482_241857344_241857483_241858505_241858719_241860516_241860705_241861405_241861503_241866829_241867056_241872031_241872279_241878748_241879344_241881915_241882018_241885313_241885508_241889464
transcript_20932.known	chr1	+	3449	16	FSM	ENSG00000174371.17	ENST00000366548.8	3449	16	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	42.5918093325727	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTAGAGGAAATCACTGTG	241844809	True	NA	3	True	AGTAAA	-15	NA	241848203	241889939	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_241848354_241848730_241849028_241849111_241849217_241850408_241850587_241852291_241852412_241853357_241853482_241857344_241857483_241858505_241858719_241860516_241860705_241861405_241861503_241866829_241867056_241872031_241872279_241878748_241879344_241881915_241882018_241885313_241885508_241889464
transcript_20934.nic	chr1	+	3198	15	NIC	ENSG00000174371.17	novel	3449	16	NA	NA	-47	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_2	28.4529687127974	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTGGGTTGTGGTTTTTT	241844762	True	NA	16	True	AATACA	-19	NA	241848156	241889746	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_241848354_241848730_241849028_241850408_241850587_241852291_241852412_241853357_241853482_241857344_241857483_241858505_241858719_241860516_241860705_241861405_241861503_241866829_241867056_241872031_241872279_241878748_241879344_241881915_241882018_241885313_241885508_241889464
transcript_20940.known	chr1	-	1207	4	FSM	ENSG00000197769.6	ENST00000357246.4	1207	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	1.88561808316413	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTAGGGCTCGGTACTAG	-241999056	True	NA	NA	False	NA	NA	NA	241999098	241995489	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_241996386_241998513_241998621_241998775_241998832_241998950
transcript_20941.known	chr1	-	8900	10	FSM	ENSG00000180287.17	ENST00000536534.7	8900	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	4.55691036764664	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAACCTGTGTGTCTGTTCT	-242524617	True	NA	NA	False	AATAAA	-16	NA	242524697	242082985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_242090111_242100667_242100783_242107670_242107840_242113889_242114027_242124467_242124666_242219987_242220116_242265336_242265449_242288361_242288531_242348105_242348243_242524087
transcript_20948.known	chr1	-	7059	20	FSM	ENSG00000143702.16	ENST00000366542.6	7059	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	49.9060613397687	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATGATTGTATATTTTA	NA	False	NA	-9	True	AATAAA	-18	NA	243255281	243124427	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_243126739_243128248_243128301_243129359_243129454_243136142_243136232_243139936_243140108_243142315_243142464_243156220_243156456_243164283_243166117_243169627_243169755_243172696_243172847_243185778_243186073_243186258_243186423_243191017_243191495_243199059_243199195_243200517_243200681_243200776_243200836_243211885_243211965_243221723_243221814_243225175_243225322_243255039
transcript_20953.nic	chr1	-	3220	13	ISM	ENSG00000143702.16	ENST00000366542.6	7059	20	-73	40668	-6	-177	5prime_fragment	FALSE	canonical	0	0	junction_9	47.5742110345044	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGAAAGAGTTTCACTAGCC	NA	False	NA	NA	False	AAGAAA	-13	NA	243255354	243165095	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_243166117_243169627_243169755_243172696_243172847_243185778_243186073_243186258_243186423_243191017_243191495_243199059_243199195_243200517_243200681_243200776_243200836_243211885_243211965_243221723_243221814_243225175_243225322_243255039
transcript_20955.nic	chr1	-	3139	13	ISM	ENSG00000143702.16	ENST00000366542.6	7059	20	-116	40792	-49	-301	5prime_fragment	FALSE	canonical	0	0	junction_9	47.5742110345044	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATGAAGGACCAGATACT	NA	False	NA	NA	False	AATAAA	-2	NA	243255397	243165219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_243166117_243169627_243169755_243172696_243172847_243185778_243186073_243186258_243186423_243191017_243191495_243199059_243199195_243200517_243200681_243200776_243200836_243211885_243211965_243221723_243221814_243225175_243225322_243255039
transcript_20957.nic	chr1	-	2664	13	ISM	ENSG00000143702.16	ENST00000366542.6	7059	20	-121	41272	-54	289	5prime_fragment	FALSE	canonical	0	0	junction_9	47.5742110345044	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGGAGGCTCAGTGGACA	NA	False	NA	NA	False	NA	NA	NA	243255402	243165699	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_243166117_243169627_243169755_243172696_243172847_243185778_243186073_243186258_243186423_243191017_243191495_243199059_243199195_243200517_243200681_243200776_243200836_243211885_243211965_243221723_243221814_243225175_243225322_243255039
transcript_20958.nic	chr1	-	2559	13	ISM	ENSG00000143702.16	ENST00000366542.6	7059	20	-209	41465	-142	96	5prime_fragment	FALSE	canonical	0	0	junction_9	47.5742110345044	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAACAAGATGCTGACAG	NA	False	NA	NA	False	AAGAAA	-24	NA	243255490	243165892	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_243166117_243169627_243169755_243172696_243172847_243185778_243186073_243186258_243186423_243191017_243191495_243199059_243199195_243200517_243200681_243200776_243200836_243211885_243211965_243221723_243221814_243225175_243225322_243255039
transcript_20963.nic	chr1	-	2894	12	ISM	ENSG00000143702.16	ENST00000366544.5	6805	19	-1	40668	-1	-177	5prime_fragment	FALSE	canonical	0	0	junction_8	54.5845314569995	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGAAAGAGTTTCACTAGCC	NA	False	NA	NA	False	AAGAAA	-13	NA	243255322	243165095	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_243166117_243169627_243169755_243172696_243172847_243186258_243186423_243191017_243191495_243199059_243199195_243200517_243200681_243200776_243200836_243211885_243211965_243221723_243221814_243225175_243225322_243255039
transcript_20968.nic	chr1	-	2412	12	ISM	ENSG00000143702.16	ENST00000366544.5	6805	19	-123	41272	-96	289	5prime_fragment	FALSE	canonical	0	0	junction_8	54.5845314569995	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGGAGGCTCAGTGGACA	NA	False	NA	NA	False	NA	NA	NA	243255444	243165699	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_243166117_243169627_243169755_243172696_243172847_243186258_243186423_243191017_243191495_243199059_243199195_243200517_243200681_243200776_243200836_243211885_243211965_243221723_243221814_243225175_243225322_243255039
transcript_20973.nic	chr1	-	2063	12	ISM	ENSG00000143702.16	ENST00000366542.6	7059	20	-3	45266	-3	0	5prime_fragment	FALSE	canonical	0	0	junction_8	48.2401019693836	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCATACAAGGCATGATCAA	NA	False	NA	NA	False	NA	NA	NA	243255284	243169693	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_243169755_243172696_243172847_243185778_243186073_243186258_243186423_243191017_243191495_243199059_243199195_243200517_243200681_243200776_243200836_243211885_243211965_243221723_243221814_243225175_243225322_243255039
transcript_20982.known	chr1	-	608	4	FSM	ENSG00000143702.16	ENST00000522995.1	608	4	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_3	66.7149824918578	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGATATGATATCCTTAAA	NA	False	NA	NA	False	NA	NA	NA	243255348	243211894	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_243211965_243221723_243221814_243225175_243225322_243255046
transcript_20983.known	chr1	-	582	3	FSM	ENSG00000143702.16	ENST00000523581.1	582	3	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_2	23	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGCCCATATTCCAAAGAA	NA	False	NA	NA	False	AATAGA	-9	NA	243255216	243221554	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_243221814_243225175_243225322_243255039
transcript_20984.known	chr1	-	2972	5	FSM	ENSG00000143702.16	ENST00000468254.5	2972	5	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_2	16.3171688720807	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAATGATTGTATATTTT	NA	False	NA	-10	True	AATAAA	-17	NA	243140363	243124428	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_243126739_243128248_243128301_243129359_243129454_243136142_243136232_243139936
transcript_20985.known	chr1	+	2581	18	FSM	ENSG00000054282.16	ENST00000366541.8	2581	18	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	51.8095394083215	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGTTGTAATGTTTCCT	NA	False	NA	12	True	AATAAA	-16	NA	243256040	243500091	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_243256241_243270104_243270258_243270977_243271064_243274542_243274657_243286271_243286398_243293090_243293220_243304712_243304778_243307988_243308178_243316754_243316894_243330539_243330693_243341038_243341174_243344214_243344332_243378720_243378864_243415701_243415830_243417967_243418077_243426426_243426559_243489013_243489141_243499755
transcript_20990.nic	chr1	+	1223	8	NIC	ENSG00000054282.16	novel	2581	18	NA	NA	-26	-229	combination_of_known_junctions	FALSE	canonical	3	9	junction_7	15.9987244389504	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAATCACTAACTGCTCT	NA	False	NA	NA	False	AAAAAG	-19	NA	243256007	243305328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_243256241_243270104_243270258_243270977_243271064_243274542_243274657_243286271_243286398_243293090_243293220_243304712_243304778_243305011
transcript_20991.nnic	chr1	+	681	4	NNC	ENSG00000054282.16	novel	525	3	NA	NA	-63	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_2	54.3016267405192	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGAGTTGTAATGTTTC	243485374	True	NA	10	True	AATAAA	-14	NA	243487751	243500089	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_243487879_243489013_243489141_243497866_243497960_243499755
transcript_20993.known	chr1	+	525	3	FSM	ENSG00000054282.16	ENST00000497459.1	525	3	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	50	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGAGTTGTAATGTTTC	243485437	True	NA	10	True	AATAAA	-14	NA	243487814	243500089	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_243487879_243489013_243489141_243499755
transcript_21.known	ERCC-00058	+	1120	1	FSM	ERCC-00058A	DQ459418	1120	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00058_+_0_1100
transcript_21002.known	chr1	-	2555	13	FSM	ENSG00000035687.10	ENST00000366535.4	2555	13	0	0	0	0	multi-exon	FALSE	canonical	3	647	junction_9	39.0941704946744	225	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGCGTATTGTGTTTT	-244444397	True	NA	-3	True	ATTAAA	-21	NA	244451909	244408493	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_244409639_244411286_244411437_244415980_244416079_244417627_244417753_244418759_244418915_244420169_244420297_244422834_244422917_244423952_244424061_244424320_244424388_244432544_244432596_244436824_244436894_244437665_244437769_244451634
transcript_21011.known	chr1	+	4017	5	FSM	ENSG00000121644.19	ENST00000302550.16	4017	5	0	0	0	0	multi-exon	FALSE	canonical	3	528	junction_3	48.7801189010441	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTATAGTGCTTTCTTT	244638563	True	NA	NA	False	ATTAAA	-19	NA	244653125	244709033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_244653356_244686596_244686670_244689248_244689343_244691878_244692021_244705555
transcript_21017.known	chr1	+	859	4	FSM	ENSG00000121644.19	ENST00000263831.11	859	4	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	292.613890457868	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTGGCGCAGGAGGGAG	244638540	True	NA	NA	False	NA	NA	NA	244653102	244705951	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_244653356_244686596_244686670_244691883_244692021_244705555
transcript_21019.known	chr1	+	486	4	FSM	ENSG00000121644.19	ENST00000418162.1	486	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	220.373924652321	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGAAAAAATTGTAGAAGAA	244653740	False	NA	NA	False	NA	NA	NA	244653750	244691922	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_244654026_244686596_244686670_244689248_244689343_244691878
transcript_21022.known	chr1	+	1126	2	FSM	ENSG00000121644.19	ENST00000484738.1	1126	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTCTGAGTCGTGGGAA	244638563	True	NA	1	True	AATAAA	-14	NA	244653125	244656521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_244654026_244656295
transcript_21023.known	chr1	-	1065	1	FSM	ENSG00000284188.2	ENST00000640271.2	1065	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGAAGTGAGCGAACTC	-244730952	False	NA	NA	False	AATAAA	-38	NA	244730962	244729897	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_244729900_244731000
transcript_21031.known	chr1	-	6867	14	FSM	ENSG00000153187.20	ENST00000640218.2	6867	14	0	0	0	0	multi-exon	FALSE	canonical	2	933	junction_13	1074.42639712557	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTTGGAGTGACCTTT	-244759756	True	NA	-3	True	ATTAAA	-19	NA	244864543	244850296	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_244854504_244854972_244855045_244855423_244855609_244855903_244856159_244856456_244856626_244856727_244856857_244857597_244857718_244858010_244858275_244858728_244858842_244859274_244859375_244860334_244860475_244862460_244862535_244862618_244862731_244863616
transcript_21037.known	chr1	-	6827	14	FSM	ENSG00000153187.20	ENST00000444376.7	6827	14	0	0	0	0	multi-exon	FALSE	canonical	2	2271	junction_4	760.962004043325	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTTGGAGTGACCTTT	-244864494	False	NA	-3	True	ATTAAA	-19	NA	244864560	244850296	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_244854504_244854972_244855045_244855423_244855609_244855903_244856159_244856456_244856626_244856727_244856857_244857597_244857718_244858010_244858275_244858728_244858842_244859274_244859375_244860334_244860475_244862460_244862535_244862618_244862731_244863673
transcript_21046.known	chr1	-	2698	14	FSM	ENSG00000153187.20	ENST00000638475.1	2698	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	1262.33553618567	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGTAAGCTAAATCATAGT	-244864025	False	NA	NA	False	NA	NA	NA	244864091	244853938	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_244854504_244854972_244855045_244855423_244855609_244855903_244856159_244856456_244856626_244856727_244856857_244857597_244857718_244858010_244858275_244858728_244858842_244859274_244859375_244860352_244860475_244862460_244862535_244862618_244862731_244863673
transcript_2106.nic	chr1	+	2283	11	NIC	ENSG00000204859.13	novel	2347	11	NA	NA	-2	0	combination_of_known_junctions	TRUE	canonical	3	43	junction_1	24.7469190001503	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGCCTGACAGTCTGTT	6578513	True	NA	16	True	AATAAA	-24	NA	6579991	6589280	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_6580071_6580540_6581300_6582057_6582300_6585918_6586031_6586694_6586788_6587204_6587292_6587477_6587633_6588059_6588197_6588277_6588443_6588755_6588845_6588915
transcript_21081.known	chr1	-	4844	13	FSM	ENSG00000153187.20	ENST00000476241.2	4844	13	0	0	0	0	multi-exon	FALSE	canonical	2	2271	junction_4	789.25955102798	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTATCTGTAAAATGTGA	-244759705	True	NA	-35	True	NA	NA	NA	244864492	244854197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_244854504_244854972_244855045_244855423_244855609_244855903_244856159_244856456_244856626_244856727_244856857_244857597_244857718_244858010_244858275_244858728_244858842_244859274_244859375_244860334_244862535_244862618_244862731_244863673
transcript_21090.nic	chr1	-	2364	11	ISM	ENSG00000153187.20	ENST00000640218.2	6867	14	-50	5696	-33	290	5prime_fragment	FALSE	canonical	2	933	junction_10	1102.85602414821	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAGTGGCAAGAACCAGT	NA	False	NA	NA	False	AATAAA	-3	NA	244864593	244855992	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_244856159_244856456_244856626_244856727_244856857_244857597_244857718_244858010_244858275_244858728_244858842_244859274_244859375_244860334_244860475_244862460_244862535_244862618_244862731_244863616
transcript_21091.nic	chr1	-	2427	11	ISM	ENSG00000153187.20	ENST00000444376.7	6827	14	-153	5696	-153	290	5prime_fragment	FALSE	canonical	2	2271	junction_1	691.532385358777	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAGTGGCAAGAACCAGT	NA	False	NA	NA	False	AATAAA	-3	NA	244864713	244855992	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_244856159_244856456_244856626_244856727_244856857_244857597_244857718_244858010_244858275_244858728_244858842_244859274_244859375_244860334_244860475_244862460_244862535_244862618_244862731_244863673
transcript_211.nic	SIRV6	+	524	6	ISM	SIRV6A	SIRV602	574	8	-131	491	-7	0	5prime_fragment	FALSE	canonical	3	10205	junction_3	7845.63424077365	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTGAAAAAGTAATAGTGC	NA	False	NA	NA	False	NA	NA	NA	993	10788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_SIRV6_+_1187_1468_1535_1640_1736_2780_2829_3106_3165_10724
transcript_2110.nic	chr1	+	2260	11	NIC	ENSG00000204859.13	novel	2347	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	32.9680148022291	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGCCTGACAGTCTGTT	6578515	True	NA	16	True	AATAAA	-24	NA	6579993	6589280	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_6580050_6580540_6581300_6582057_6582300_6585918_6586031_6586694_6586788_6587204_6587292_6587477_6587633_6588059_6588197_6588277_6588443_6588755_6588845_6588915
transcript_21124.known	chr1	+	2290	4	FSM	ENSG00000203667.10	ENST00000498262.1	2290	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	860.254355150589	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTATACTGTGTATTTTT	244820729	True	NA	NA	False	AATAAA	-17	NA	244835658	244845057	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_244835757_244841943_244842059_244842198_244842259_244843040
transcript_21129.known	chr1	+	1005	3	FSM	ENSG00000203667.10	ENST00000391839.6	1005	3	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_1	845	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATTAAAATATTATTTAAAA	244820726	True	NA	93	True	NA	NA	NA	244835655	244843880	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_244835757_244842194_244842259_244843040
transcript_21136.nic	chr1	-	908	2	ISM	ENSG00000153187.20	ENST00000476241.2	4844	13	-75	8519	-7	-4552	5prime_fragment	FALSE	canonical	3	3002	junction_1	0	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACAGAAAGGCGGAGATAA	-244864145	True	NA	-6	True	AAAACA	-1	NA	244864567	244862716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_244862731_244863673
transcript_21137.known	chr1	-	3207	13	FSM	ENSG00000153187.20	ENST00000440865.2	3207	13	0	0	0	0	multi-exon	FALSE	canonical	2	2271	junction_4	749.468195715394	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGAATTCATTTTACT	-244863040	False	NA	-40	True	AAGAAA	-37	NA	244863106	244853405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_244854504_244854972_244855045_244855423_244855609_244855903_244856159_244856456_244856626_244856727_244856857_244857597_244857718_244858010_244858275_244858728_244858842_244859274_244859375_244860334_244860475_244862460_244862535_244862618
transcript_21138.known	chr1	+	860	8	FSM	ENSG00000203666.13	ENST00000366521.7	860	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	57.3695503392039	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTACTATTTATTTAAAAAC	244968517	True	NA	NA	False	TTTAAA	-36	NA	244970355	245087556	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_244970444_245002120_245002233_245017241_245017327_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245087244
transcript_2114.nnic	chr1	+	2447	11	NNC	ENSG00000204859.13	novel	2347	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	38.9645993178423	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGCCTGACAGTCTGTT	6578515	True	NA	16	True	AATAAA	-24	NA	6579993	6589280	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_6580137_6580540_6581300_6582057_6582300_6585918_6586031_6586594_6586788_6587204_6587292_6587477_6587633_6588059_6588197_6588277_6588443_6588755_6588845_6588915
transcript_21141.known	chr1	+	6167	8	FSM	ENSG00000203666.13	ENST00000366522.6	6167	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	65.1885804448	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACTCTAGGGAAGTTTTT	244969969	False	NA	NA	False	AGTAAA	-7	NA	244969981	245127164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_244970444_245002120_245002233_245017241_245017327_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245121919
transcript_21144.nic	chr1	+	1054	7	ISM	ENSG00000203666.13	ENST00000366523.6	1418	8	651	-2	6	2	3prime_fragment	FALSE	canonical	3	56	junction_1	40.8316326176437	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTATGAGTGCCAATT	244968494	True	NA	11	True	AATAAA	-14	NA	244970332	245087839	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_244970444_245017241_245017327_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245087244
transcript_21147.known	chr1	+	906	6	FSM	ENSG00000203666.13	ENST00000473686.5	906	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	48.6028805730689	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTGTGGAAGGTGATT	244968512	True	NA	18	True	AATGAA	-37	NA	244970350	245087794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_244970444_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245087244
transcript_21150.known	chr1	+	1201	6	FSM	ENSG00000203666.13	ENST00000497591.5	1201	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	69.1791876217118	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTCAAATCACTTCAATGT	244970275	False	NA	22	True	AATAAA	-35	NA	244970285	245091806	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_244970444_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245091026
transcript_21152.known	chr1	+	1389	6	FSM	ENSG00000203666.13	ENST00000487845.5	1389	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	66.0623947492066	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGCCTTCTGTGTCTGG	244968551	True	NA	14	True	CATAAA	-15	NA	244970389	245122991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_244970444_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245121919
transcript_21158.known	chr1	-	1784	8	FSM	ENSG00000162851.8	ENST00000366514.5	1784	8	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_6	16.3132599127088	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTGTGGTTTCTTTTGG	-246562898	True	NA	NA	False	ATTAAA	-17	NA	246566261	246540560	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_246541203_246544520_246544682_246548544_246548608_246551212_246551303_246556572_246556722_246557380_246557535_246564345_246564435_246565825
transcript_2116.known	chr1	+	2347	11	FSM	ENSG00000204859.13	ENST00000377674.9	2347	11	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	28.8749025972383	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGCCTGACAGTCTGTT	6578515	True	NA	16	True	AATAAA	-24	NA	6579993	6589280	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_6580137_6580540_6581300_6582057_6582300_6585918_6586031_6586694_6586788_6587204_6587292_6587477_6587633_6588059_6588197_6588277_6588443_6588755_6588845_6588915
transcript_21163.known	chr1	+	5127	11	FSM	ENSG00000162852.14	ENST00000366513.9	5127	11	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	7.97746827007165	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGCCTTATTTTGTTTTT	246564280	True	NA	16	True	AATAAA	-28	NA	246566455	246668595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_246566664_246591511_246591942_246621428_246621635_246631893_246631925_246633923_246634011_246634472_246634588_246641748_246641771_246641940_246642038_246647138_246648038_246660198_246660335_246665699
transcript_21169.nic	chr1	+	4673	10	NIC	ENSG00000162852.14	novel	5127	11	NA	NA	-5	-253	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	25.863363668458	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTCAGAGAGTTTATTT	246564275	True	NA	NA	False	TTTAAA	-16	NA	246566450	246668342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_246566664_246591511_246591942_246631893_246631925_246633923_246634011_246634472_246634588_246641748_246641771_246641940_246642038_246647138_246648038_246660198_246660335_246665699
transcript_21171.nic	chr1	+	2240	9	ISM	ENSG00000162852.14	ENST00000366513.9	5127	11	53	20360	-5	0	5prime_fragment	FALSE	canonical	3	72	junction_3	6.79038842777054	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACTACAAGATGTTCTAT	246564333	True	NA	14	True	AATAAA	-25	NA	246566508	246648235	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_246566664_246591511_246591942_246621428_246621635_246631893_246631925_246633923_246634011_246634472_246634588_246641748_246641771_246641940_246642038_246647138
transcript_21176.known	chr1	+	645	4	FSM	ENSG00000162852.14	ENST00000366511.1	645	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	39.6316371938716	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTATCATGAGCAATTGC	246564338	True	NA	NA	False	AATGAA	-19	NA	246566513	246633957	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_246566664_246591511_246591942_246631893_246631925_246633923
transcript_21179.known	chr1	+	2141	12	FSM	ENSG00000143653.10	ENST00000366510.4	2141	12	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_2	25.7681974534503	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTTGTTCATTACCTAA	246721467	True	NA	NA	False	AATAAA	-19	NA	246724408	246768137	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_246724613_246726891_246727005_246735974_246736056_246740171_246740302_246744075_246744126_246758225_246758357_246759033_246759152_246759956_246760077_246760170_246760228_246764245_246764358_246766057_246766140_246767194
transcript_21187.nic	chr1	-	1138	5	ISM	ENSG00000153207.16	ENST00000648844.2	8887	36	-9	68466	-9	-45606	5prime_fragment	FALSE	canonical	3	183	junction_1	12.0933866224478	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCATGAAAAGAGAGTAAGTA	-246924201	True	NA	NA	False	NA	NA	NA	246931957	246907563	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_246907759_246913231_246913413_246916141_246916396_246918249_246918378_246931577
transcript_21189.known	chr1	+	2545	2	FSM	ENSG00000227953.7	ENST00000426089.1	2545	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAGCGTAAGAAGTTAAC	NA	False	NA	5	True	AATAAA	-17	NA	246789093	246792385	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_246789699_246790445
transcript_21190.known	chr1	-	826	6	FSM	ENSG00000197472.15	ENST00000487338.6	826	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	76.5365272272005	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCTATTTCTGATGAATA	-247003279	True	NA	-40	True	ATTAAA	-15	NA	247008093	246945674	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_246945828_246967694_246967793_246988124_246988256_246999347_246999441_246999911_247000075_247007905
transcript_21194.nic	chr1	-	689	5	ISM	ENSG00000197472.15	ENST00000366504.6	862	6	-75	22115	-17	17659	5prime_fragment	FALSE	canonical	3	86	junction_1	47.5105251496971	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCCAGTCTCAGGTGGTT	-247003260	True	NA	NA	False	ATTAAA	-18	NA	247008074	246967663	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_246967793_246988120_246988256_246999347_246999441_246999911_247000075_247007905
transcript_21195.nic	chr1	-	653	5	ISM	ENSG00000197472.15	ENST00000479214.5	885	6	-18	22117	-17	17659	5prime_fragment	FALSE	canonical	3	86	junction_1	50.0324894443601	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCCAGTCTCAGGTGGTT	-247003260	True	NA	NA	False	ATTAAA	-18	NA	247008074	246967663	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_246967793_246988120_246988256_246999347_246999441_246999947_247000075_247007905
transcript_21196.known	chr1	-	3341	4	FSM	ENSG00000197472.15	ENST00000339986.8	3341	4	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	45.7116566704332	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGTGTATTTCTGAATCT	-247003243	True	NA	NA	False	AATAAA	-24	NA	247008057	246985322	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_246988256_246999347_246999441_246999911_247000075_247007905
transcript_212.known	SIRV6	+	1311	6	FSM	SIRV6A	SIRV613	1311	6	0	0	0	0	multi-exon	FALSE	canonical	3	567	junction_2	11481.5370399612	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAGACCGGGAGTATAC	NA	False	NA	NA	False	NA	NA	NA	3105	11824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV6_+_3165_7104_7449_7805_7924_10724_10819_11031_11109_11205
transcript_21201.known	chr1	-	4197	4	FSM	ENSG00000277462.2	ENST00000366503.3	4197	4	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	17.5562587763516	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGGCCTTGAGTGTTTT	-247075983	True	NA	-2	True	NA	NA	NA	247078811	247034636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_247038428_247038809_247038871_247039410_247039538_247078593
transcript_21206.known	chr1	-	1951	4	FSM	ENSG00000188295.15	ENST00000343381.10	1951	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	16.6599986661331	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAATAAAAAAATAA	-247101542	True	NA	NA	False	NA	NA	NA	247104372	247099990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_247101320_247101730_247101792_247101986_247102114_247103938
transcript_21207.known	chr1	-	730	4	FSM	ENSG00000188295.15	ENST00000366501.1	730	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	14.522013940528	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTACGAATGTAAGGAATGT	-247104260	False	NA	NA	False	AATACA	-27	NA	247104278	247100855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_247101320_247101730_247101792_247101990_247102114_247104196
transcript_21210.known	chr1	-	2258	1	FSM	ENSG00000221953.5	ENST00000623686.1	2258	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCACCTATGGTTTTAATC	NA	False	NA	NA	False	AATAAA	-44	NA	247112417	247110159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_247110200_247112400
transcript_21211.known	chr1	-	956	4	FSM	ENSG00000196418.13	ENST00000491356.5	956	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	54.485472069779	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTATAGTAGAATGATTT	-247171863	True	NA	-12	True	AATAAA	-17	NA	247172002	247138144	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_247138758_247159005_247159067_247159686_247159814_247171847
transcript_21212.known	chr1	-	1674	4	FSM	ENSG00000196418.13	ENST00000340684.10	1674	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	35.1093529798922	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATTGAGGTG	-247171877	True	NA	NA	False	AATATA	-18	NA	247172016	247155900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_247157218_247159005_247159067_247159686_247159814_247171847
transcript_21213.known	chr1	-	2776	4	FSM	ENSG00000196418.13	ENST00000543802.3	2776	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	44.2894519672072	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTTTCCTGCTGTTCAT	-247171881	True	NA	-31	True	AATAAA	-19	NA	247172020	247154988	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_247157404_247159005_247159067_247159686_247159814_247171847
transcript_21220.known	chr1	-	637	2	FSM	ENSG00000227671.4	ENST00000606212.1	637	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGATGGCATTCATTGCCT	-247207636	True	NA	24	True	AAGAAA	-14	NA	247210814	247201567	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_247202081_247210690
transcript_21227.nic	chr1	-	4657	11	NIC	ENSG00000162714.13	novel	5315	10	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_5	112.010222747747	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTTGAGGCTTTTACTTTC	-247326242	True	NA	-24	True	AATAAA	-33	NA	247331887	247298200	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_247301277_247308474_247308589_247309698_247309807_247310323_247310457_247322697_247322806_247323153_247323231_247328682_247328867_247329188_247329616_247329965_247330082_247331431_247331648_247331789
transcript_21244.known	chr1	-	5315	10	FSM	ENSG00000162714.13	ENST00000682384.1	5315	10	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_9	31.6824522058785	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCCTGTTAGGCTTTTCA	-247326222	True	NA	-5	True	AATAAA	-16	NA	247331867	247297414	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_247301277_247308474_247308589_247309698_247309807_247310323_247310457_247323153_247323231_247328682_247328867_247329188_247329616_247329965_247330082_247331431_247331648_247331789
transcript_21245.nic	chr1	-	4518	10	NIC	ENSG00000162714.13	novel	5315	10	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_7	83.1531385122922	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTTGAGGCTTTTACTTTC	-247326258	True	NA	-24	True	AATAAA	-33	NA	247331903	247298200	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_247301277_247308474_247308589_247309698_247309807_247310323_247310457_247323153_247323231_247328682_247328867_247329188_247329569_247329965_247330082_247331431_247331648_247331789
transcript_21257.nnic	chr1	-	3031	10	NNC	ENSG00000162714.13	novel	1007	5	NA	NA	-48	-8297	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	86.3532795491224	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCCAGGTGCAGTGGCTCA	-247326270	True	NA	NA	False	AAAAAG	-17	NA	247331915	247306497	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_247308028_247308474_247308589_247309698_247309807_247310323_247310457_247323153_247323231_247328682_247328867_247329188_247329616_247329965_247330082_247331431_247331648_247331789
transcript_21263.nnic	chr1	-	2443	10	NNC	ENSG00000162714.13	novel	1007	5	NA	NA	-48	-8885	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	86.3532795491224	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTTCTTGTTTATTGT	-247326270	True	NA	-25	True	NA	NA	NA	247331915	247307085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_247308028_247308474_247308589_247309698_247309807_247310323_247310457_247323153_247323231_247328682_247328867_247329188_247329616_247329965_247330082_247331431_247331648_247331789
transcript_21267.known	chr1	+	5170	6	FSM	ENSG00000162722.9	ENST00000366481.4	5170	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	3.42928563989645	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATGGACCTGAAAATGTT	247856925	True	NA	13	True	AATAAA	-25	NA	247857186	247880138	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_247857667_247860616_247860713_247864704_247864936_247867844_247867868_247867962_247868064_247875899
transcript_21277.known	chr1	-	3148	7	FSM	ENSG00000175137.11	ENST00000366472.6	3148	7	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_4	10.85382677011	519	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTACTGTCCTTGCTGGA	-248824308	True	NA	-1	True	AATAAA	-21	NA	248825915	248810445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_248812371_248812988_248813163_248814448_248814611_248816533_248816663_248816821_248816885_248824752_248825367_248825834
transcript_21286.nnic	chr1	+	2322	4	NNC	ENSG00000171161.13	novel	3045	4	NA	NA	-13	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	78.3212756677406	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGCCAAGTGCCGCCTT	NA	False	NA	16	True	AATAAA	-14	NA	248838196	248849513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_248838552_248844482_248844637_248845565_248845624_248847758
transcript_21288.known	chr1	+	3045	4	FSM	ENSG00000171161.13	ENST00000306562.8	3045	4	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_3	16.8193010820572	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAAGTGCCGCCTTTATC	248835952	True	NA	20	True	AATAAA	-18	NA	248838223	248849517	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_248838552_248844482_248844637_248845565_248845663_248847051
transcript_21289.known	chr1	+	583	4	FSM	ENSG00000171161.13	ENST00000505503.5	583	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	73.6115932898254	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGGGCAGTGGCAGCGG	248836059	True	NA	NA	False	NA	NA	NA	248838330	248847285	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_248838552_248844482_248844637_248845565_248845663_248847174
transcript_21296.nic	chr1	-	1841	12	NIC	ENSG00000171163.16	novel	1942	12	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	70.2572604406698	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATGTGTGGGCAGAGCAA	-248857378	True	NA	-4	True	AATAAA	-15	NA	248859045	248850007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_248850517_248850681_248850782_248853936_248854052_248855379_248855459_248855557_248855636_248855724_248855947_248856287_248856423_248856513_248856563_248857233_248857437_248857827_248857860_248858130_248858322_248858917
transcript_21298.known	chr1	-	2065	12	FSM	ENSG00000171163.16	ENST00000451251.5	2065	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	75.1827525499814	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGGAGCTGGACTACTTT	-248858850	False	1667	-62	True	NA	NA	NA	248858860	248850065	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_248850517_248850681_248850782_248853936_248854052_248855379_248855459_248855557_248855636_248855724_248855947_248856287_248856423_248856513_248856563_248857233_248857498_248857827_248857860_248858130_248858322_248858511
transcript_21299.known	chr1	-	1942	12	FSM	ENSG00000171163.16	ENST00000306601.9	1942	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	61.6887682826575	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATGTGTGGGCAGAGCAA	-248857418	True	NA	-4	True	AATAAA	-15	NA	248859085	248850007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_248850517_248850681_248850782_248853936_248854052_248855379_248855459_248855557_248855636_248855724_248855947_248856287_248856423_248856513_248856563_248857233_248857498_248857827_248857860_248858130_248858322_248858917
transcript_21310.nic	chr1	-	2272	11	NIC	ENSG00000171163.16	novel	1942	12	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_6	62.2061090247574	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATGTGTGGGCAGAGCAA	-248857418	True	NA	-4	True	AATAAA	-15	NA	248859085	248850007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_248850517_248850681_248850782_248853936_248854052_248855379_248855459_248855557_248855636_248855724_248855947_248856287_248856423_248856513_248856563_248857233_248857860_248858130_248858322_248858917
transcript_21319.nic	chr1	-	2504	10	NIC	ENSG00000171163.16	novel	1942	12	NA	NA	-13	0	intron_retention	FALSE	canonical	0	0	junction_6	65.5672305987912	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATGTGTGGGCAGAGCAA	-248857379	True	NA	-4	True	AATAAA	-15	NA	248859046	248850007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_248850517_248850681_248850782_248853936_248854052_248855379_248855459_248855557_248855636_248855724_248855947_248856287_248856423_248856513_248856563_248857233_248858322_248858917
transcript_21339.nic	chr1	-	2691	9	NIC	ENSG00000171163.16	novel	1942	12	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_5	69.2440204999681	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATGTGTGGGCAGAGCAA	-248859134	False	NA	-4	True	AATAAA	-15	NA	248859144	248850007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_248850517_248850681_248850782_248853936_248854052_248855379_248855459_248855557_248855947_248856287_248856423_248856513_248856563_248857233_248858322_248858917
transcript_21348.known	chr1	+	2717	3	FSM	ENSG00000185220.12	ENST00000329291.6	2717	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	2	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCCTGTTGTGCTAGCA	248904986	True	NA	8	True	ATTAAA	-16	NA	248906234	248919146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_248906343_248913815_248913880_248916601
transcript_21359.known	chr10	+	2150	15	FSM	ENSG00000015171.20	ENST00000397962.8	2150	15	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	39.8407544392135	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGCCCTTCCCGGAGTC	NA	False	NA	NA	False	NA	NA	NA	134464	252470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_134787_179993_180129_209888_210049_221194_221357_236837_236916_237584_237678_239437_239526_240055_240112_240892_240971_242020_242140_246765_246974_247397_247467_248335_248609_248902_249089_252347
transcript_2136.known	chr1	+	3632	4	FSM	ENSG00000116273.6	ENST00000377648.5	3632	4	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	9.41629792788369	232	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACAATTGTGTTTCTTTTC	6610223	True	NA	59	True	NA	NA	NA	6613730	6624030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_6614106_6616756_6616859_6619802_6620338_6621410
transcript_21363.known	chr10	+	4229	15	FSM	ENSG00000015171.20	ENST00000381591.5	4229	15	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	34.9501832058496	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTAGTAATTTGTTTATT	134451	True	NA	23	True	AATAAA	-19	NA	135068	254637	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_135303_179993_180129_209888_210049_221194_221357_236837_236916_237584_237678_239437_239526_240055_240112_240892_240971_242020_242140_246765_246974_247397_247467_248335_248609_248902_249089_252347
transcript_21366.known	chr10	+	4020	15	FSM	ENSG00000015171.20	ENST00000627286.2	4020	15	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_7	42.4461243152747	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATGTATTTAAAAAAA	134461	True	NA	-1	True	AATATA	-30	NA	135507	254613	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_135560_179993_180129_209888_210049_221194_221357_236837_236916_237584_237678_239437_239526_240058_240112_240892_240971_242020_242140_246765_246974_247397_247467_248335_248609_248902_249089_252347
transcript_21375.known	chr10	+	3898	14	FSM	ENSG00000015171.20	ENST00000381607.8	3898	14	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	33.102673339906	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAACTAGCTTTAGTA	134437	True	NA	12	True	AATAAA	-8	NA	135483	254626	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_135560_179993_180129_209888_210049_236837_236916_237584_237678_239437_239526_240055_240112_240892_240971_242020_242140_246765_246974_247397_247467_248335_248609_248902_249089_252347
transcript_2138.known	chr1	-	4487	4	FSM	ENSG00000162413.17	ENST00000377658.8	4487	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	9.97775303139718	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGAGTCATTGCCTTTGT	-6602044	True	NA	-9	True	AATAAA	-16	NA	6602869	6590723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6593659_6595484_6595558_6599046_6599453_6601796
transcript_21382.known	chr10	-	7749	36	FSM	ENSG00000151240.17	ENST00000381496.7	7749	36	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_5	20.8748261632747	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTACAGATTATTGGTAAT	NA	False	NA	2	True	AATATA	-32	NA	486558	274189	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_277578_281199_281324_283271_283447_286272_286348_288363_288422_310030_310093_327005_327177_329432_329602_341198_341330_344808_344919_344998_345111_348640_348763_349330_349455_356425_356507_357827_357938_362489_362692_363196_363312_364373_364583_366274_366412_369493_369634_382646_382762_384026_384147_384545_384640_387744_387810_389990_390094_390263_390374_390739_390864_399108_399220_408925_409018_413912_414111_415768_415889_419064_419200_422823_423034_440870_440997_472438_472550_486458
transcript_21388.nic	chr10	-	3961	19	NIC	ENSG00000107929.16	novel	5963	18	NA	NA	53	19	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	56.4832543741183	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTGCTCTGTTTCTTTT	-924697	True	NA	-6	True	NA	NA	NA	931768	806913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_808273_812920_813214_814741_814851_814945_815071_817724_817890_820799_820846_825064_825317_825763_825871_829384_829595_829680_829735_830866_830978_836402_836507_842931_843069_844976_845056_863742_863884_864122_864271_884446_884507_885640_885761_931427
transcript_21395.known	chr10	-	5963	18	FSM	ENSG00000107929.16	ENST00000316157.8	5963	18	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_1	23.2480233188823	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTCTAAACATAGTTTT	-924634	True	NA	-8	True	ATTAAA	-18	NA	931705	809496	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_813214_814741_814851_814945_815071_817724_817890_820799_820846_825064_825317_825763_825871_829384_829595_829680_829735_830866_830978_836402_836507_842931_843069_844976_845056_863742_863884_864122_864271_884446_884507_885640_885761_931427
transcript_214.known	SIRV6	+	1163	5	FSM	SIRV6A	SIRV610	1163	5	0	0	0	0	multi-exon	FALSE	canonical	3	14712	junction_1	3667.11217274574	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTAAAATGGGGTTTGCC	NA	False	NA	NA	False	ATTAAA	-5	NA	2472	11690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV6_+_2621_2740_2829_3106_3165_10724_11109_11205
transcript_21409.known	chr10	-	3104	1	FSM	ENSG00000205740.2	ENST00000615314.1	3104	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACTGCAATGCAGGGAG	-988178	True	NA	NA	False	ATTAAA	-16	NA	988329	985225	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_985200_988300
transcript_21415.known	chr10	+	4656	17	FSM	ENSG00000107937.19	ENST00000360803.9	4656	17	0	0	0	0	multi-exon	FALSE	canonical	1	255	junction_14	133.385191738064	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACACTTTCTTTGGTAAT	981154	True	NA	NA	False	AATAAA	-23	NA	988433	1019932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_988528_992488_992660_995928_996033_996105_996243_997207_997309_999002_999096_1000676_1000869_1000947_1001014_1005817_1005908_1007017_1007129_1008957_1009036_1009528_1009581_1010419_1010521_1012464_1012663_1014246_1014313_1015752_1015897_1017074
transcript_21426.nic	chr10	+	1567	14	ISM	ENSG00000107937.19	ENST00000360803.9	4656	17	-49	7340	-49	2075	5prime_fragment	FALSE	canonical	3	667	junction_5	50.7239891661044	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTTGAAAATTCTGGAGT	981105	True	NA	22	True	NA	NA	NA	988384	1012592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_988528_992488_992660_995928_996033_996105_996243_997207_997309_999002_999096_1000676_1000869_1000947_1001014_1005817_1005908_1007017_1007129_1008957_1009036_1009528_1009581_1010419_1010521_1012464
transcript_21428.nic	chr10	+	1436	13	ISM	ENSG00000107937.19	ENST00000360803.9	4656	17	-49	9415	-49	0	5prime_fragment	FALSE	canonical	3	667	junction_5	49.2850974771617	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTTGTGTCACTTTTTA	981105	True	NA	11	True	AATATA	-28	NA	988384	1010517	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_988528_992488_992660_995928_996033_996105_996243_997207_997309_999002_999096_1000676_1000869_1000947_1001014_1005817_1005908_1007017_1007129_1008957_1009036_1009528_1009581_1010419
transcript_21441.known	chr10	-	2739	5	FSM	ENSG00000067064.12	ENST00000381344.8	2739	5	0	0	0	0	multi-exon	TRUE	canonical	3	472	junction_4	216.25722531282	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGCCAACTCCTTTAAG	-1048370	False	471	NA	False	AATATA	-23	NA	1049119	1039418	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_1041505_1042631_1042763_1043300_1043394_1043998_1044172_1048863
transcript_21444.known	chr10	-	1066	4	FSM	ENSG00000067064.12	ENST00000491735.1	1066	4	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_3	326.02283491941	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATACATACTTATGGGAAA	-1048354	False	NA	-12	True	AATAAA	-19	NA	1049103	1040902	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_1041505_1042631_1042763_1043300_1043394_1048863
transcript_21449.known	chr10	-	1029	3	FSM	ENSG00000067064.12	ENST00000482091.1	1029	3	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_2	265	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACAGAGACGGCTGAAAGC	-1035622	True	NA	NA	False	NA	NA	NA	1048935	1042676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_1042763_1043300_1044172_1048863
transcript_21451.known	chr10	+	5137	14	FSM	ENSG00000047056.17	ENST00000263150.9	5137	14	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_9	13.6520583878349	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTTCATCCCTCATCA	1056342	True	NA	NA	False	ATTAAA	-14	NA	1056384	1132372	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_1056969_1072115_1072294_1077906_1078004_1080010_1080107_1080411_1080477_1084402_1084539_1086285_1086358_1093451_1093497_1096169_1096247_1103601_1103837_1105125_1105268_1124217_1124353_1124909_1125025_1129212
transcript_2146.known	chr1	-	3201	16	FSM	ENSG00000007923.17	ENST00000377577.10	3201	16	0	0	0	0	multi-exon	FALSE	canonical	3	681	junction_10	100.823850793792	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGCTGGCGCTCTTCCGTG	-6679110	True	NA	-16	True	AATAAA	-16	NA	6701816	6634169	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6635701_6636116_6636247_6637197_6637341_6637446_6637505_6638294_6638365_6639901_6640058_6644557_6644675_6645040_6645127_6645788_6645979_6651528_6651603_6652828_6652952_6653910_6654040_6667708_6667811_6678393_6678468_6680907_6681038_6701728
transcript_21461.nnic	chr10	-	685	3	Antisense	novelGene_ENSG00000047056.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	2.5	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGCAATTAATAGCCCTA	-1055962	True	NA	NA	False	NA	NA	NA	1056711	1053732	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr10_-_1053937_1054167_1054246_1056308
transcript_21469.known	chr10	-	3386	27	FSM	ENSG00000107959.17	ENST00000677922.1	3386	27	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	33.181676700237	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGCAACTCTGACTTAACC	-3167250	True	NA	-19	True	NA	NA	NA	3172806	3137745	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_3138125_3138234_3138338_3138903_3139050_3140686_3140766_3143388_3143502_3144291_3144367_3145595_3145717_3147149_3147251_3147571_3147738_3147986_3148064_3148170_3148292_3149620_3149754_3151246_3151364_3155590_3155730_3156929_3157065_3157434_3157532_3158039_3158154_3158913_3159043_3159847_3159937_3160203_3160331_3163724_3163886_3165237_3165335_3165412_3165528_3166228_3166381_3166935_3167043_3170103_3170207_3172716
transcript_21470.known	chr10	-	3427	27	FSM	ENSG00000107959.17	ENST00000224949.9	3427	27	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_23	20.5429626298026	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGCTTGAGTCATTATT	-3167226	True	NA	-1	True	AATAAA	-18	NA	3172782	3137727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_3138125_3138234_3138338_3138903_3139050_3140686_3140813_3143388_3143502_3144291_3144367_3145595_3145717_3147149_3147251_3147571_3147738_3147986_3148064_3148170_3148292_3149620_3149754_3151246_3151364_3155590_3155730_3156929_3157065_3157434_3157532_3158039_3158154_3158913_3159043_3159847_3159937_3160203_3160331_3163724_3163886_3165237_3165335_3165412_3165528_3166228_3166381_3166935_3167043_3170103_3170207_3172716
transcript_21476.known	chr10	-	3197	25	FSM	ENSG00000107959.17	ENST00000677305.1	3197	25	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_21	44.0761454442448	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGACTTAACCTCTGCT	-3167250	True	NA	-13	True	AATAAA	-6	NA	3172806	3137739	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_3138125_3138234_3138338_3138903_3139050_3140686_3140813_3143388_3143502_3144291_3144367_3145595_3145717_3147149_3147251_3147571_3147738_3149620_3149754_3151246_3151364_3155590_3155730_3156929_3157065_3157434_3157532_3158039_3158154_3158913_3159043_3159847_3159937_3160203_3160331_3163724_3163886_3165237_3165335_3165412_3165484_3166228_3166381_3166935_3167043_3170103_3170207_3172716
transcript_21482.known	chr10	+	2626	22	FSM	ENSG00000067057.18	ENST00000381125.9	2626	22	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_2	137.885357750873	1078	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCCTCTGTTTTAGTTTT	3057807	True	NA	31	True	ATTAAA	-20	NA	3067547	3136802	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_3067708_3082387_3082462_3099274_3099353_3101364_3101555_3103778_3103945_3105114_3105160_3105392_3105502_3107213_3107310_3108700_3108794_3109354_3109481_3112221_3112287_3113118_3113189_3113371_3113519_3116775_3116847_3118781_3118870_3119891_3120045_3129818_3129984_3132379_3132442_3133202_3133315_3134482_3134583_3135735_3135839_3136449
transcript_215.known	SIRV6	+	485	4	FSM	SIRV6A	SIRV609	485	4	0	0	0	0	multi-exon	FALSE	canonical	3	17716	junction_3	6509.94062099562	1306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACAAGTCAAGCCATTGC	NA	False	NA	NA	False	NA	NA	NA	1137	2120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845
transcript_21504.known	chr10	-	3487	27	FSM	ENSG00000107959.17	ENST00000380989.6	3487	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	34.4304676208691	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCTGCTTGAGTCATTA	-3172827	False	NA	-3	True	AATAAA	-16	NA	3172841	3137729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_3138125_3138234_3138338_3138903_3139050_3140686_3140813_3143388_3143502_3144291_3144367_3145595_3145717_3147149_3147251_3147571_3147738_3147986_3148064_3148167_3148292_3149620_3149754_3151246_3151364_3155590_3155730_3156929_3157065_3157434_3157532_3158039_3158154_3158913_3159043_3159847_3159937_3160203_3160331_3163724_3163886_3165237_3165335_3165412_3165528_3166228_3166381_3166935_3167043_3170103_3170207_3172716
transcript_21505.known	chr10	-	4104	25	FSM	ENSG00000107959.17	ENST00000678539.1	4104	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	33.5773361063679	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAGGGCAACTCTGA	-3167250	True	NA	-26	True	NA	NA	NA	3172806	3137752	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_3139050_3140686_3140813_3143388_3143502_3144291_3144367_3145595_3145717_3147147_3147251_3147571_3147738_3147986_3148064_3148170_3148292_3149620_3149754_3151246_3151364_3155590_3155730_3156929_3157065_3157434_3157532_3158039_3158154_3158913_3159043_3159847_3159937_3160203_3160331_3163724_3163886_3165237_3165335_3165412_3165528_3166228_3166381_3166935_3167043_3170103_3170207_3172716
transcript_21508.known	chr10	-	4590	4	FSM	ENSG00000067082.15	ENST00000497571.6	4590	4	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_2	20.9284495364563	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAGTTACATCTCTTTTT	-3781943	True	NA	NA	False	AATAAA	-18	NA	3785209	3775995	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_3779591_3780105_3780230_3781640_3782215_3784912
transcript_21513.known	chr10	-	4537	3	FSM	ENSG00000067082.15	ENST00000542957.1	4537	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	77	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGAGTTACATCTCTTTT	-3782015	True	NA	NA	False	AATAAA	-17	NA	3785281	3775996	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_3779591_3781640_3782215_3784912
transcript_21514.nic	chr10	-	2980	3	NIC	ENSG00000067082.15	novel	4590	4	NA	NA	-30	0	intron_retention	FALSE	canonical	3	130	junction_1	15	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAAACAAAAAC	-3781973	True	NA	NA	False	AAAAAG	-10	NA	3785239	3779046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_3779591_3780105_3782215_3784912
transcript_21515.known	chr10	-	2169	2	FSM	ENSG00000067082.15	ENST00000469435.1	2169	2	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTTGCATCCCACCACTG	-3781927	True	NA	NA	False	NA	NA	NA	3785193	3780326	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_3782215_3784912
transcript_21516.known	chr10	+	1613	10	FSM	ENSG00000165568.18	ENST00000298375.12	1613	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	2.72618758808562	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAATTTTAATTTCTTTT	4825820	True	NA	NA	False	AATAAA	-24	NA	4826206	4848062	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_4826364_4830674_4830843_4833349_4833467_4835674_4835810_4837458_4837582_4839728_4839827_4841784_4841858_4842420_4842505_4847147_4847231_4847487
transcript_21520.known	chr10	+	844	7	FSM	ENSG00000165568.18	ENST00000532248.5	844	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	2.40947204913349	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGTATTTATCATACACAT	4825909	True	NA	NA	False	AATATA	-25	NA	4826295	4847296	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_4826364_4830674_4830843_4833349_4833467_4835674_4835810_4837458_4837582_4842420_4842505_4847147
transcript_21522.known	chr10	+	6543	9	FSM	ENSG00000187134.14	ENST00000380872.9	6543	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	4.09076704298839	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTATGTTAAGAGGGTT	4963312	True	NA	NA	False	AATAAA	-16	NA	4963414	4983283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_4963529_4965913_4966082_4966926_4967044_4968308_4968387_4968821_4968945_4972200_4972311_4972583_4972750_4975850_4975934_4977699
transcript_21524.known	chr10	+	1186	9	FSM	ENSG00000196139.14	ENST00000380554.5	1186	9	0	0	0	0	multi-exon	TRUE	canonical	3	88	junction_7	6.96419413859206	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATGTTTTCTCAAAGAT	5093970	True	NA	14	True	AATAAA	-21	NA	5094413	5107686	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_5094529_5096409_5096578_5097433_5097551_5098801_5098880_5099326_5099450_5102100_5102211_5102484_5102651_5105594_5105678_5107460
transcript_21526.known	chr10	+	3989	12	FSM	ENSG00000173848.19	ENST00000355029.9	3989	12	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_3	63.8880736163896	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTGTGTTTGAGAGCAT	5408482	True	NA	NA	False	ATTAAA	-20	NA	5412556	5459056	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_5412821_5426654_5426722_5429169_5429230_5451829_5451938_5452357_5452526_5452857_5452921_5453249_5453347_5453483_5453561_5454264_5454523_5454947_5455119_5456086_5456274_5456587
transcript_21531.known	chr10	+	3253	10	FSM	ENSG00000173848.19	ENST00000380359.3	3253	10	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	88.0670339521878	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCTGAAGGTTTCTTGC	5443018	True	NA	16	True	ATTAAA	-23	NA	5446610	5458463	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_5446859_5451829_5451938_5452357_5452526_5452857_5452921_5453249_5453347_5453483_5453561_5454264_5454523_5454947_5455119_5456086_5456274_5456587
transcript_21536.known	chr10	-	2780	7	FSM	ENSG00000196372.13	ENST00000459912.5	2780	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	47.9223909624254	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCTGTGTTCACACGACT	-5665310	True	NA	-17	True	AATAAA	-19	NA	5666578	5638867	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_5640831_5641769_5641962_5642472_5642554_5648969_5649105_5651212_5651364_5652862_5653051_5666508
transcript_21539.known	chr10	-	2717	6	FSM	ENSG00000196372.13	ENST00000357700.11	2717	6	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	12.4482930556763	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGTGTTCACACGACTC	-5665327	True	NA	-16	True	AATAAA	-20	NA	5666595	5638866	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_5640831_5641769_5641962_5648969_5649105_5651212_5651364_5652862_5653051_5666508
transcript_21540.known	chr10	-	2565	5	FSM	ENSG00000196372.13	ENST00000479033.1	2565	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	39.5126562002607	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCTGTGTTCACACGACT	-5665327	True	NA	-17	True	AATAAA	-19	NA	5666595	5638867	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_5640831_5641769_5641962_5648969_5649105_5652862_5653051_5666508
transcript_21554.known	chr10	+	514	3	FSM	ENSG00000108021.20	ENST00000477043.5	514	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	6.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGTGCTTGGTACACAC	5678741	False	NA	NA	False	NA	NA	NA	5684941	5712539	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_5685176_5709529_5709664_5712393
transcript_21570.known	chr10	-	2297	11	FSM	ENSG00000057608.17	ENST00000380191.9	2297	11	0	0	0	0	multi-exon	FALSE	canonical	3	1853	junction_4	86.1605478162715	3061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCCGGTGTTGGTTTGTG	-5766889	True	NA	-5	True	AATAAA	-19	NA	5813434	5765222	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_5766153_5766240_5766296_5766493_5766639_5768212_5768385_5773841_5773942_5785141_5785274_5785851_5786051_5794884_5795020_5796762_5796863_5800597_5800706_5813213
transcript_21578.known	chr10	-	1408	10	FSM	ENSG00000057608.17	ENST00000380181.7	1408	10	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_7	579.97594671282	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCATATAATGAAATCAATA	-5766866	True	NA	-30	True	TTTAAA	-14	NA	5813411	5765953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_5766153_5766240_5766296_5766493_5766639_5768212_5768385_5773841_5773942_5785141_5785274_5785851_5786051_5796762_5796863_5800597_5800706_5813213
transcript_21588.known	chr10	-	918	7	FSM	ENSG00000057608.17	ENST00000456041.5	918	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	712.345577807725	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAGCTTTTAAAATGA	-5766842	True	NA	16	True	NA	NA	NA	5813387	5773841	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_5773942_5785141_5785274_5785851_5786051_5794884_5794990_5796762_5796863_5800597_5800706_5813213
transcript_2159.known	chr1	-	2210	15	FSM	ENSG00000007923.17	ENST00000294401.11	2210	15	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	236.684798577245	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGTTTGGAAATTAGTCGT	NA	False	NA	NA	False	TATAAA	-24	NA	6701924	6635112	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6635701_6636116_6636247_6637197_6637341_6637446_6637505_6638294_6638365_6644557_6644675_6645040_6645127_6645788_6645979_6651528_6651603_6652828_6652952_6653910_6654040_6667708_6667811_6678393_6678468_6680907_6681038_6701728
transcript_21590.known	chr10	-	2734	8	FSM	ENSG00000134461.16	ENST00000380094.10	2734	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	38.6327554792351	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGCAGAGTCGTCAGATG	-5888998	True	NA	NA	False	AATAAA	-33	NA	5889893	5861615	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_5862692_5878096_5878288_5880297_5880377_5883005_5883168_5883968_5884078_5885722_5885766_5887846_5888068_5889040
transcript_216.known	SIRV6	+	574	4	FSM	SIRV6A	SIRV607	574	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	12415.5112751035	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGCAGTCAAGTCGTAG	NA	False	NA	NA	False	NA	NA	NA	1130	2540	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV6_+_1187_1468_1736_1845_2027_2470
transcript_21602.known	chr10	-	1646	7	FSM	ENSG00000134461.16	ENST00000380092.8	1646	7	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_2	15.0222057856583	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCTTCTTAAGTCAGTC	-5888976	True	NA	1	True	AATAAA	-18	NA	5889871	5878086	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_5878288_5880297_5880377_5883005_5883168_5883968_5884078_5885722_5885766_5887846_5888068_5889040
transcript_21609.known	chr10	-	1567	6	FSM	ENSG00000134461.16	ENST00000191063.8	1567	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	38.6936687327526	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGAGGAGGCAATAAAGT	-5889011	True	NA	-34	True	NA	NA	NA	5889906	5878121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_5878288_5883005_5883168_5883968_5884078_5885722_5885766_5887846_5888068_5889040
transcript_21616.known	chr10	+	3640	22	FSM	ENSG00000134452.20	ENST00000397269.7	3640	22	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_17	75.3088275113468	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGCTGTGTGATGTCTGCG	5888257	True	NA	9	True	ATTAAA	-22	NA	5890202	5937594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_5890347_5903019_5903176_5906036_5906633_5908924_5909056_5909158_5909295_5910937_5911129_5913746_5913840_5914177_5914270_5915402_5915572_5916233_5916457_5917419_5917508_5917589_5917677_5918341_5918479_5921257_5921358_5921447_5921570_5923620_5923697_5924310_5924509_5924750_5924802_5925366_5925493_5927434_5927542_5936455_5936588_5937109
transcript_21621.nic	chr10	+	3663	22	NIC	ENSG00000134452.20	novel	3548	21	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_2	80.0930014975646	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCGCTGTGTGATGTCTGC	5888280	True	NA	8	True	ATTAAA	-21	NA	5890225	5937593	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_5890347_5891018_5891117_5903019_5903176_5906036_5906633_5908924_5909056_5909158_5909295_5910937_5911129_5913746_5913840_5914177_5914270_5915402_5915572_5916233_5916457_5917419_5917508_5917589_5917677_5918341_5918479_5921257_5921358_5921447_5921570_5923620_5923697_5924310_5924509_5925366_5925493_5927434_5927542_5936455_5936588_5937109
transcript_21627.known	chr10	+	3548	21	FSM	ENSG00000134452.20	ENST00000362091.9	3548	21	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	38.7123688244468	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCGCTGTGTGATGTCTGC	5888297	True	NA	8	True	ATTAAA	-21	NA	5890242	5937593	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_5890347_5903019_5903176_5906036_5906633_5908924_5909056_5909158_5909295_5910937_5911129_5913746_5913840_5914177_5914270_5915402_5915572_5916233_5916457_5917419_5917508_5917589_5917677_5918341_5918479_5921257_5921358_5921447_5921570_5923620_5923697_5924310_5924509_5925366_5925493_5927434_5927542_5936455_5936588_5937109
transcript_21642.nic	chr10	+	3361	20	NIC	ENSG00000134452.20	novel	3548	21	NA	NA	12	23	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	59.5684852261073	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGTATTTAAACTTTTA	5888269	True	NA	-51	True	GATAAA	-15	NA	5890214	5937534	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_5890347_5906036_5906633_5908924_5909056_5909158_5909295_5910937_5911129_5913746_5913840_5914177_5914270_5915402_5915572_5916233_5916457_5917419_5917508_5917589_5917677_5918341_5918479_5921257_5921358_5921447_5921570_5923620_5923697_5924310_5924509_5925366_5925493_5927434_5927542_5936455_5936588_5937109
transcript_21643.nic	chr10	+	3420	20	NIC	ENSG00000134452.20	novel	3548	21	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	59.5684852261073	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCGCTGTGTGATGTCTGC	5888269	True	NA	8	True	ATTAAA	-21	NA	5890214	5937593	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_5890347_5906036_5906633_5908924_5909056_5909158_5909295_5910937_5911129_5913746_5913840_5914177_5914270_5915402_5915572_5916233_5916457_5917419_5917508_5917589_5917677_5918341_5918479_5921257_5921358_5921447_5921570_5923620_5923697_5924310_5924509_5925366_5925493_5927434_5927542_5936455_5936588_5937109
transcript_21665.known	chr10	-	1566	7	FSM	ENSG00000134470.21	ENST00000379977.8	1566	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	3.97562014729219	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAATGCATTAAGAG	-5977453	False	NA	NA	False	AATAAA	-17	NA	5977543	5952383	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_5953207_5956378_5956455_5959753_5959787_5960366_5960568_5963742_5963842_5966144_5966340_5977404
transcript_21667.known	chr10	-	1581	6	FSM	ENSG00000134470.21	ENST00000532948.5	1581	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	3.86781592116274	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCAATATTTTTAAAATG	-5977948	False	NA	NA	False	AATAAA	-8	NA	5978038	5952392	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_5953207_5956378_5956455_5959753_5959787_5960366_5960568_5966144_5966340_5977776
transcript_21674.known	chr10	+	3275	12	FSM	ENSG00000134453.16	ENST00000379888.9	3275	12	0	0	0	0	multi-exon	FALSE	canonical	3	832	junction_4	60.748499284256	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAACTGGCAAGTTTCCGT	6079142	True	NA	NA	False	AATAAA	-25	NA	6089033	6117447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_6089194_6097047_6097189_6101270_6101388_6104930_6105098_6106140_6106239_6108685_6108743_6109985_6110128_6112209_6112362_6113507_6113582_6114048_6114148_6115238_6115312_6115452
transcript_21677.nic	chr10	+	2376	12	NIC	ENSG00000134453.16	novel	3275	12	NA	NA	-75	0	combination_of_known_junctions	FALSE	canonical	3	92	junction_8	257.442603729212	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGGTTGTTTCTCTTTT	NA	False	NA	31	True	TATAAA	-33	NA	6088958	6115766	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_6089194_6097047_6097189_6101270_6101388_6104930_6105098_6106140_6106239_6108685_6108743_6109985_6110128_6112209_6113069_6113507_6113582_6114048_6114148_6115238_6115312_6115452
transcript_21688.nic	chr10	+	639	4	ISM	ENSG00000134453.16	ENST00000432931.5	805	7	-112	5014	-75	-1301	5prime_fragment	FALSE	canonical	3	899	junction_2	39.5333895446481	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAATAGAAGAAAGGGAAA	NA	False	NA	NA	False	NA	NA	NA	6088958	6105076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_6089194_6097047_6097189_6101270_6101388_6104930
transcript_21690.known	chr10	+	4524	16	FSM	ENSG00000170525.21	ENST00000360521.7	4524	16	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_15	55.2097414914755	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTTGAAATACATGGACGA	6200955	True	NA	NA	False	AATAAA	-6	NA	6202899	6235519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_6203337_6213622_6213749_6215220_6215318_6216124_6216192_6216705_6216781_6217134_6217192_6219568_6219694_6220657_6220866_6221380_6221528_6221640_6221746_6222854_6222985_6223957_6224021_6224148_6224214_6226191_6226366_6228195_6228219_6232894
transcript_21692.known	chr10	+	4157	15	FSM	ENSG00000170525.21	ENST00000379789.8	4157	15	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	29.0036063908175	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACGAAGTAAACCTCTGG	6142612	True	NA	NA	False	AATAAA	-19	NA	6144933	6235532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_6145014_6213622_6213749_6215220_6215318_6216124_6216192_6216705_6216781_6217134_6217192_6219568_6219694_6220657_6220866_6221380_6221528_6221640_6221746_6222854_6222985_6223957_6224021_6224148_6224214_6226191_6226366_6232894
transcript_21695.known	chr10	+	4482	15	FSM	ENSG00000170525.21	ENST00000379775.9	4482	15	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	21.2626912881772	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACGAAGTAAACCTCTGG	6200987	True	NA	NA	False	AATAAA	-19	NA	6202931	6235532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_6203337_6213622_6213749_6215220_6215318_6216124_6216192_6216705_6216781_6217134_6217192_6219568_6219694_6220657_6220866_6221380_6221528_6221640_6221746_6222854_6222985_6223957_6224021_6224148_6224214_6226191_6226366_6232894
transcript_21696.known	chr10	+	2311	15	FSM	ENSG00000170525.21	ENST00000640683.1	2311	15	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_14	44.8416715812879	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACTTTATTATAAGATAG	6200987	True	NA	NA	False	AATAAA	-16	NA	6202931	6254644	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_6203337_6213622_6213749_6215220_6215318_6216124_6216192_6216705_6216781_6217134_6217192_6219568_6219694_6220657_6220866_6221380_6221528_6221640_6221746_6222854_6222985_6223957_6224021_6224148_6224214_6226191_6226366_6254177
transcript_21702.known	chr10	-	3255	18	FSM	ENSG00000065675.16	ENST00000263125.10	3255	18	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_14	11.9560903679176	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCCTCTTAATCGTTTAC	-6579075	True	NA	-5	True	AATAAA	-11	NA	6580276	6427147	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_6428363_6430809_6430939_6441892_6442082_6456673_6456813_6462302_6462366_6464312_6464405_6478991_6479166_6483439_6483601_6485151_6485270_6486034_6486145_6491682_6491813_6497034_6497121_6497219_6497252_6498395_6498559_6507435_6507497_6510994_6511195_6515017_6515145_6580210
transcript_21711.known	chr10	-	3096	17	FSM	ENSG00000065675.16	ENST00000397176.6	3096	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	15.1553156928518	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTAATCGTTTACTTCCC	-6579100	True	NA	0	True	AATAAA	-16	NA	6580301	6427142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_6428363_6430809_6430939_6456673_6456813_6462302_6462366_6464312_6464405_6478991_6479166_6483439_6483601_6485151_6485270_6486034_6486145_6491682_6491813_6497034_6497121_6497219_6497252_6498395_6498559_6507435_6507497_6510994_6511195_6515017_6515145_6580210
transcript_21714.nic	chr10	-	2560	17	ISM	ENSG00000065675.16	ENST00000263125.10	3255	18	-76	3218	-51	-3218	5prime_fragment	FALSE	canonical	1	8	junction_13	11.9680564420461	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAACGACATTTCCTAAGG	-6579151	True	NA	NA	False	ATTAAA	-19	NA	6580352	6430365	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_6430939_6441892_6442082_6456673_6456813_6462302_6462366_6464312_6464405_6478991_6479166_6483439_6483601_6485151_6485270_6486034_6486145_6491682_6491813_6497034_6497121_6497219_6497252_6498395_6498559_6507435_6507497_6510994_6511195_6515017_6515145_6580210
transcript_21717.known	chr10	+	1263	3	FSM	ENSG00000237943.8	ENST00000613651.2	1263	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAGAAAATAGCTCTAAAC	6579459	False	NA	NA	False	AAAAAG	-28	NA	6580561	6584508	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_6580928_6582137_6582202_6583675
transcript_2172.known	chr1	+	1366	6	FSM	ENSG00000041988.16	ENST00000054650.9	1361	6	-2	-3	-2	3	multi-exon	FALSE	canonical	0	0	junction_1	44.2248798754728	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCGCTCCCATCATCATTT	6624837	True	NA	17	True	AATAAA	-17	NA	6624865	6633565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_6624955_6625149_6625293_6628498_6628692_6630287_6630354_6632390_6632496_6632795
transcript_21720.known	chr10	+	1254	2	FSM	ENSG00000237943.8	ENST00000667809.1	1254	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACCCTCCTCTTGGGGAG	6579453	True	NA	NA	False	NA	NA	NA	6580555	6584557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_6580928_6583675
transcript_21724.known	chr10	+	2529	2	FSM	ENSG00000223784.2	ENST00000650334.1	2529	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTAATTTTACTTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	6737275	6740532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_6737629_6738356
transcript_21739.known	chr10	-	8056	21	FSM	ENSG00000198879.13	ENST00000397167.6	8056	21	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_16	4.98598034492716	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTGTTTGGGTCTTTG	-7410268	True	NA	0	True	AATAAA	-17	NA	7411034	7158623	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_7163911_7170927_7171057_7171894_7172159_7172494_7172662_7175989_7176166_7188623_7188734_7197547_7197688_7200413_7200485_7202479_7202523_7205814_7205929_7220410_7220538_7227854_7227938_7243557_7243706_7248547_7248650_7276891_7276990_7283903_7284151_7285865_7285955_7367648_7367890_7370280_7370376_7381798_7381950_7410860
transcript_21742.known	chr10	-	798	4	FSM	ENSG00000198879.13	ENST00000682043.1	798	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	3.09120616516523	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAGTGCATTTTCAGATG	-7410240	True	NA	NA	False	NA	NA	NA	7411006	7367483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_7367890_7370280_7370376_7381798_7381950_7410860
transcript_21743.known	chr10	+	1869	1	FSM	ENSG00000278982.1	ENST00000623134.1	1869	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCCAAACAGTGTATGACT	7411569	False	NA	NA	False	AATAAA	-23	NA	7411598	7413467	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_7411600_7413500
transcript_21745.known	chr10	-	6716	14	FSM	ENSG00000123243.15	ENST00000397146.7	6716	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	5.11176853102651	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTGTTTGTAGGCATTT	-7666370	True	NA	NA	False	AATAAA	-21	NA	7666966	7559269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_7563385_7566029_7566408_7569667_7569785_7573141_7573196_7576452_7577013_7579754_7580065_7585900_7586070_7615981_7616099_7617112_7617283_7637227_7637479_7640753_7640856_7641926_7642091_7655630_7655676_7666802
transcript_21753.known	chr10	-	6360	13	FSM	ENSG00000151657.12	ENST00000379562.9	6360	13	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_10	17.0299980426697	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTATTACTCAGAAATGG	-7784554	True	NA	0	True	AATAAA	-21	NA	7787993	7750961	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_7756143_7759889_7759991_7762456_7762557_7763722_7763792_7766052_7766104_7769215_7769346_7774830_7774892_7775750_7775800_7778837_7779020_7780055_7780179_7780263_7780308_7783080_7783176_7787819
transcript_21757.nic	chr10	-	864	8	ISM	ENSG00000151657.12	ENST00000379562.9	6360	13	-30	18278	-30	-8007	5prime_fragment	FALSE	canonical	3	181	junction_5	14.9325011915866	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCACTGGATGAAATCAT	-7784584	True	NA	-24	True	AAAAAG	-4	NA	7788023	7769239	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_7769346_7774830_7774892_7775750_7775800_7778837_7779020_7780055_7780179_7780263_7780308_7783080_7783176_7787819
transcript_2176.known	chr1	-	613	5	FSM	ENSG00000007923.17	ENST00000485073.5	613	5	0	0	0	0	multi-exon	FALSE	canonical	3	819	junction_1	84.7861279927324	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATTTATGAAAGGATGC	-6679098	True	NA	NA	False	NA	NA	NA	6701804	6653808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6654040_6667708_6667811_6678393_6678468_6680907_6681038_6701728
transcript_21762.nic	chr10	-	569	5	ISM	ENSG00000151657.12	ENST00000379562.9	6360	13	-30	27955	-30	-17684	5prime_fragment	FALSE	canonical	3	181	junction_2	13.235841491949	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGACCTTGATGATGAAG	-7784584	True	NA	NA	False	AAAAAG	-6	NA	7788023	7778916	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_7779020_7780055_7780179_7780263_7780308_7783080_7783176_7787819
transcript_21770.known	chr10	+	1101	10	FSM	ENSG00000165629.20	ENST00000356708.12	1101	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	951.998495693386	1439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTTTTTCTTATATAT	7765657	True	NA	NA	False	AATAAA	-16	NA	7788176	7807801	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_7788264_7796120_7796156_7797046_7797179_7798989_7799195_7799771_7799916_7800026_7800092_7802269_7802426_7802757_7802855_7806973_7807011_7807658
transcript_21775.known	chr10	+	1078	9	FSM	ENSG00000165629.20	ENST00000335698.4	1078	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1313.22212872575	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATATATAAGAACAATAGATA	7765657	True	NA	NA	False	AATAAA	-30	NA	7788176	7807815	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_7788264_7796120_7796156_7797046_7797179_7798989_7799195_7799771_7799916_7800026_7800092_7802269_7802426_7802757_7802855_7807658
transcript_21778.known	chr10	+	1096	9	FSM	ENSG00000165629.20	ENST00000493053.5	1096	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	1285.63979694936	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTTTTTCTTATATAT	7765627	True	NA	NA	False	AATAAA	-16	NA	7788146	7807801	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_7788264_7797046_7797179_7798989_7799195_7799771_7799916_7800026_7800092_7802269_7802426_7802757_7802855_7806973_7807011_7807658
transcript_2178.nic	chr1	-	1804	4	FSM	ENSG00000007923.17	ENST00000693337.1	1512	4	-59	-233	43	233	multi-exon	FALSE	canonical	3	880	junction_1	63.1259763400843	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGGCTTAAACTGGGATG	-6679175	True	NA	NA	False	AAAAAG	-22	NA	6701881	6666363	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6667811_6678393_6678468_6680907_6681038_6701728
transcript_2179.known	chr1	-	745	4	FSM	ENSG00000007923.17	ENST00000465911.1	745	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	452.607998161765	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTAATATCTTATTTAT	-6679113	True	NA	NA	False	AATAAA	-16	NA	6701819	6670460	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_6670911_6678393_6678468_6680907_6681038_6701728
transcript_21790.known	chr10	+	622	6	FSM	ENSG00000165629.20	ENST00000460820.6	622	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1245.99865168466	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCCATCTTTTCCCTT	7765664	True	NA	NA	False	NA	NA	NA	7788183	7800052	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_7788264_7796120_7796156_7797046_7797179_7798989_7799195_7799771_7799916_7800026
transcript_21791.known	chr10	+	4875	7	FSM	ENSG00000165632.9	ENST00000344293.6	4875	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	4.18993502999218	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTTCCATTTTCTT	7817279	True	NA	9	True	AATAAA	-20	NA	7818504	8016631	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_7818876_7824317_7824561_7963919_7965743_7977240_7977324_8009077_8009331_8013730_8013838_8014636
transcript_21793.known	chr10	+	7982	14	FSM	ENSG00000048740.19	ENST00000542579.5	7982	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	22.5913006244732	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAAGTTCTCCGGAGT	11017578	True	NA	NA	False	AATAAA	-11	NA	11017929	11336667	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_11018164_11165485_11165683_11217424_11217508_11249152_11249202_11257737_11257873_11266597_11266678_11270665_11270825_11275056_11275121_11288417_11288553_11314138_11314259_11321188_11321387_11325835_11325980_11328925_11329098_11330455
transcript_21794.nic	chr10	+	2700	14	NIC	ENSG00000048740.19	novel	7982	14	NA	NA	-56	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_10	14.6076902823347	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATACAAAAAAAAAAAAAAG	11017801	False	NA	12	True	NA	NA	NA	11017815	11331277	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_11018164_11165485_11165683_11217424_11217508_11249152_11249202_11257737_11257873_11266597_11266678_11270665_11270825_11275056_11275121_11288417_11288553_11314138_11314271_11321206_11321387_11325835_11325980_11328925_11329098_11330455
transcript_21795.nic	chr10	+	2662	14	NIC	ENSG00000048740.19	novel	7982	14	NA	NA	-21	33	combination_of_known_junctions	FALSE	canonical	3	36	junction_10	14.6076902823347	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTCATGTGAGGGAAAAAAA	11017894	False	NA	67	True	AAAAAG	-36	NA	11017908	11331332	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_11018164_11165485_11165683_11217424_11217508_11249152_11249202_11257737_11257873_11266597_11266678_11270665_11270825_11275056_11275121_11288417_11288553_11314138_11314271_11321206_11321387_11325835_11325980_11328925_11329098_11330455
transcript_21796.known	chr10	+	1892	14	FSM	ENSG00000048740.19	ENST00000608830.5	1892	14	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	23.3088347016304	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGGGAAGTCAATGTGAAA	11164385	True	NA	NA	False	NA	NA	NA	11165139	11330639	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_11165318_11165485_11165683_11217424_11217508_11249152_11249202_11257737_11257873_11266597_11266678_11270665_11270825_11275056_11275121_11288417_11288553_11314138_11314271_11321206_11321387_11325835_11325980_11328925_11329098_11330455
transcript_21807.known	chr10	-	11377	15	FSM	ENSG00000148429.15	ENST00000609104.6	4709	15	-104	-6564	-88	6564	multi-exon	FALSE	canonical	3	141	junction_10	19.3555613481511	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTACGTATGTGAACATC	-11611340	False	NA	NA	False	TATAAA	-19	NA	11611754	11453945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_11463850_11481769_11481923_11484970_11485071_11485168_11485235_11485816_11485912_11489101_11489223_11490831_11490881_11493118_11493229_11501100_11501209_11509594_11509676_11518534_11518575_11525385_11525469_11527499_11527568_11597630_11597718_11611442
transcript_21820.known	chr10	-	1823	3	FSM	ENSG00000148429.15	ENST00000606752.1	1823	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	98.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTCATGGAGCGCTTTTA	-11610310	True	NA	-6	True	AATAAA	-15	NA	11611666	11564126	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_11565639_11597630_11597718_11611442
transcript_21822.known	chr10	+	1633	5	FSM	ENSG00000134463.15	ENST00000379215.9	1633	5	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_4	29.8998327754521	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTATGTTTTATCTCCCC	11739514	True	NA	13	True	AATAAA	-18	NA	11742381	11764070	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_11742747_11747348_11747471_11749494_11749593_11755407_11755609_11763223
transcript_21825.nic	chr10	+	3115	4	ISM	ENSG00000134463.15	ENST00000379215.9	1633	5	-40	6173	-24	2167	5prime_fragment	FALSE	canonical	3	236	junction_1	8.99382504215469	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTGCCCGTTGTCTTTG	11739474	True	NA	-1	True	AATAAA	-12	NA	11742341	11757897	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_11742747_11747348_11747471_11749494_11749593_11755407
transcript_21828.nnic	chr10	+	1949	5	NNC	ENSG00000148426.13	novel	1646	5	NA	NA	-22	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	33.4252898267165	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTTCATTTTTTAAT	11822272	True	NA	1	True	AATAAA	-7	NA	11823316	11870862	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_11823471_11851996_11852216_11866530_11866784_11869489_11870051_11870100
transcript_21830.known	chr10	+	3375	4	FSM	ENSG00000148426.13	ENST00000277570.10	3375	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	4.49691252107735	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCTTGTTTTTGCATTG	11822311	True	NA	6	True	AATAAA	-20	NA	11823355	11872277	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_11823471_11851996_11852216_11866530_11866784_11869489
transcript_21832.known	chr10	-	5168	22	FSM	ENSG00000151461.20	ENST00000357604.10	5168	22	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_17	17.6272825028526	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGGCGTGGTGTTGTTT	-12038825	True	NA	-7	True	AATAAA	-14	NA	12042809	11920021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_11921308_11929864_11929986_11931640_11931783_11936544_11936713_11942664_11942764_11943063_11943169_11948368_11948509_11952065_11952250_11955231_11955508_11956319_11956524_11959170_11959357_11964008_11964126_11967340_11967455_11979056_11979166_11997671_11997758_11999905_12000010_12001675_12001826_12004529_12004728_12014023_12014185_12028744_12029525_12035058_12035442_12042754
transcript_21837.nic	chr10	-	415	2	ISM	ENSG00000151461.20	ENST00000357604.10	5168	22	-54	115114	-54	-77	5prime_fragment	FALSE	canonical	3	191	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATCAAGAGGAAGAGAGAAA	-12038879	True	NA	-4	True	AAAAAG	-21	NA	12042863	12035135	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_12035442_12042754
transcript_21838.known	chr10	-	640	2	FSM	ENSG00000151461.20	ENST00000460569.1	640	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGCAGTTGATTGTATT	-12042908	True	NA	0	True	NA	NA	NA	12043170	12035058	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_12035442_12042913
transcript_21839.nic	chr10	-	352	2	ISM	ENSG00000151461.20	ENST00000357604.10	5168	22	-54	115177	-54	-140	5prime_fragment	FALSE	canonical	3	191	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACGAAGAAAAGGTGAAGGC	-12038879	True	NA	-26	True	AAAAAG	-25	NA	12042863	12035198	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_12035442_12042754
transcript_21844.known	chr10	+	5173	17	FSM	ENSG00000181192.12	ENST00000263035.9	5173	17	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_13	16.1535599791501	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGACTCCTGGACTTCT	12063978	True	NA	8	True	AATAAA	-22	NA	12068953	12123221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_12069188_12081471_12081628_12084539_12084752_12087534_12087730_12088985_12089256_12091512_12091685_12094072_12094272_12097683_12097997_12100177_12100263_12101041_12101182_12106245_12106397_12107908_12108016_12112899_12113065_12117672_12117756_12118748_12118919_12120181_12120268_12120786
transcript_21851.nnic	chr10	+	3064	16	NIC	ENSG00000181192.12	novel	5173	17	NA	NA	-39	879	combination_of_known_splicesites	TRUE	canonical	3	18	junction_12	56.3094623980336	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATTAAAAGAGGCCTCCT	NA	False	NA	NA	False	NA	NA	NA	12068914	12121238	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_12069188_12081471_12081628_12084539_12084752_12087534_12087730_12088985_12089256_12091512_12091685_12094072_12094272_12097683_12097997_12100177_12100263_12101041_12101182_12106245_12106397_12107908_12108016_12117672_12117756_12118748_12118919_12120181_12120268_12120786
transcript_21857.nnic	chr10	+	2959	16	NIC	ENSG00000181192.12	novel	5173	17	NA	NA	-39	879	combination_of_known_splicesites	FALSE	canonical	2	18	junction_4	56.2976218167537	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATTAAAAGAGGCCTCCT	NA	False	NA	NA	False	NA	NA	NA	12068914	12121238	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_12069188_12081471_12081628_12084539_12084752_12087534_12087730_12091512_12091685_12094072_12094272_12097683_12097997_12100177_12100263_12101041_12101182_12106245_12106397_12107908_12108016_12112899_12113065_12117672_12117756_12118748_12118919_12120181_12120268_12120786
transcript_21859.nic	chr10	+	3034	16	NIC	ENSG00000181192.12	novel	5173	17	NA	NA	-39	879	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	58.6028440720528	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATTAAAAGAGGCCTCCT	NA	False	NA	NA	False	NA	NA	NA	12068914	12121238	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_12069188_12081471_12081628_12084539_12084752_12088985_12089256_12091512_12091685_12094072_12094272_12097683_12097997_12100177_12100263_12101041_12101182_12106245_12106397_12107908_12108016_12112899_12113065_12117672_12117756_12118748_12118919_12120181_12120268_12120786
transcript_21881.known	chr10	+	2495	12	FSM	ENSG00000065665.21	ENST00000298428.14	2495	12	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_7	12.4701295996235	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTTCTAAGATCATTTGT	12128299	True	NA	13	True	AATAAA	-17	NA	12129676	12165407	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_12129795_12133240_12133309_12136104_12136171_12143116_12143196_12149594_12149727_12149851_12149962_12155777_12155932_12156906_12157068_12157907_12158106_12160929_12161122_12162212_12162290_12164267
transcript_21884.known	chr10	+	2030	12	FSM	ENSG00000065665.21	ENST00000304267.12	2030	12	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_11	31.1429654580398	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAAGTGTCTGCTTCTTTC	12128323	True	NA	NA	False	AATAAA	-14	NA	12129700	12169956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_12129795_12133240_12133309_12136104_12136171_12143116_12143196_12149594_12149727_12149851_12149962_12155777_12155932_12156906_12157068_12157907_12158106_12160929_12161122_12162212_12162290_12169257
transcript_21887.known	chr10	-	917	11	FSM	ENSG00000165609.13	ENST00000378952.7	917	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	537.269811174981	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAGACCACCAGGCCTTCT	-12186793	True	NA	-99	True	NA	NA	NA	12195860	12167671	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_12167812_12170716_12170771_12170899_12170909_12172764_12172867_12173717_12173814_12177792_12177901_12179082_12179133_12180394_12180490_12184888_12184957_12186228_12186333_12195769
transcript_21890.known	chr10	-	919	11	FSM	ENSG00000165609.13	ENST00000378937.7	919	11	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_8	537.465943107096	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGGTGGTGGTATGGAA	-12195804	False	NA	-3	True	AATAAA	-12	NA	12195822	12167575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_12167812_12170716_12170771_12170899_12170909_12172764_12172867_12173717_12173814_12177792_12177901_12179082_12179133_12184493_12184533_12184888_12184957_12186228_12186333_12195769
transcript_21896.known	chr10	-	1201	10	FSM	ENSG00000165609.13	ENST00000537776.5	1201	10	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	434.896780715313	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTGGTGGTGGTATGGA	-12194320	True	NA	-4	True	AATAAA	-11	NA	12196144	12167576	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_12167812_12170716_12170771_12170899_12170913_12172768_12172867_12173717_12173814_12177792_12177901_12179082_12179133_12184888_12184957_12186228_12186333_12195769
transcript_219.known	SIRV6	+	531	4	FSM	SIRV6A	SIRV616	531	4	0	0	0	0	multi-exon	FALSE	canonical	3	1100	junction_2	8524.62155562736	1168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTGAAAAAGTAATAGTGC	NA	False	NA	NA	False	NA	NA	NA	2285	10788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV6_+_2621_2740_2815_3106_3165_10724
transcript_2190.known	chr1	+	431	5	FSM	ENSG00000171735.19	ENST00000461311.1	431	5	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_4	2052.40943770974	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGCTTTAAGACAGTTCT	6762077	False	NA	NA	False	NA	NA	NA	6785551	6887787	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_6785576_6820180_6820251_6825091_6825211_6871756_6871841_6887653
transcript_21900.known	chr10	-	1126	10	FSM	ENSG00000165609.13	ENST00000378940.7	1126	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	434.693250720807	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGCTGTGATTTCTTTGG	-12186802	True	NA	3	True	NA	NA	NA	12195869	12169721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_12170157_12170716_12170771_12170899_12170909_12172764_12172867_12173717_12173814_12177792_12177901_12179082_12179133_12184888_12184957_12186228_12186333_12195769
transcript_21914.known	chr10	+	1321	13	FSM	ENSG00000151465.14	ENST00000281141.9	1321	13	0	0	0	0	multi-exon	FALSE	canonical	3	2482	junction_5	174.677381191727	877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCTTTTCTACCGAGTC	12173604	True	NA	33	True	AATAAA	-18	NA	12196187	12250589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_12196320_12198704_12198777_12209966_12210025_12210289_12210323_12215739_12215836_12217360_12217468_12230947_12230997_12235047_12235124_12237143_12237267_12238456_12238486_12246148_12246278_12249580_12249719_12250310
transcript_21915.known	chr10	+	564	8	FSM	ENSG00000151465.14	ENST00000442050.5	564	8	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_4	892.279218676325	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTCAAGAAACACATACAG	12173648	True	NA	NA	False	AAGAAA	-22	NA	12196231	12237224	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_12196320_12198704_12198777_12209966_12210025_12210289_12210323_12217360_12217468_12230947_12230997_12235047_12235124_12237143
transcript_21918.known	chr10	+	8088	11	FSM	ENSG00000183049.14	ENST00000619168.5	8088	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_10	7.21110255092798	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTCATTTCCTCTGTCA	12349482	True	NA	6	True	AATAAA	-19	NA	12349546	12835545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_12349911_12553224_12553357_12666735_12666811_12760947_12761087_12769672_12769800_12791157_12791234_12814194_12814308_12816249_12816329_12824464_12824553_12825572_12825691_12828768
transcript_2192.known	chr1	+	567	4	FSM	ENSG00000171735.19	ENST00000473578.5	567	4	0	0	0	0	multi-exon	FALSE	canonical	3	4330	junction_1	571.412868831869	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTTTAAAATTTAAGTTT	6762005	True	NA	34	True	AATAAA	-19	NA	6785479	6872038	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_6785576_6820180_6820251_6825091_6825211_6871756
transcript_21921.known	chr10	+	1578	10	FSM	ENSG00000183049.14	ENST00000378845.5	1578	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	5.11593974809837	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAAATCATTGAAC	12349674	False	NA	NA	False	NA	NA	NA	12349732	12826143	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_12349911_12553224_12553357_12666735_12666811_12760947_12761087_12769672_12769800_12791157_12791234_12814194_12814308_12816249_12816329_12824464_12824553_12825572
transcript_21924.known	chr10	-	2747	3	FSM	ENSG00000151468.11	ENST00000378825.5	2747	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0.5	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGAGATGATGAGTGTTT	-13001508	True	NA	2	True	AATAAA	-25	NA	13001713	12896624	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_12898680_12998337_12998513_13001196
transcript_21926.known	chr10	+	3521	16	FSM	ENSG00000123240.17	ENST00000378748.7	3521	16	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	66.0815657603036	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTTTTGTTTAAATTT	13096209	True	NA	6	True	ATTAAA	-2	NA	13100172	13138291	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_13100303_13108137_13108290_13108961_13109016_13109096_13109289_13110273_13110477_13112452_13112636_13116266_13116341_13118887_13119041_13122384_13122488_13123994_13124111_13125417_13125568_13125945_13126040_13127744_13127904_13132066_13132198_13133501_13133582_13136744
transcript_21927.known	chr10	+	3488	16	FSM	ENSG00000123240.17	ENST00000378752.7	3488	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	71.3700839910455	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTTTTGTTTAAATTT	13096209	True	NA	6	True	ATTAAA	-2	NA	13100172	13138291	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_13100303_13108137_13108290_13108961_13109016_13109111_13109289_13110273_13110477_13112452_13112636_13116266_13116341_13118905_13119041_13122384_13122488_13123994_13124111_13125417_13125568_13125945_13126040_13127744_13127904_13132066_13132198_13133501_13133582_13136744
transcript_21928.known	chr10	+	3479	15	FSM	ENSG00000123240.17	ENST00000378747.8	3479	15	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	55.6627967207498	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTTAAGAATCTCTCC	13096199	True	NA	23	True	ATTAAA	-19	NA	13100162	13138308	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_13100303_13108137_13108290_13109111_13109289_13110273_13110477_13112452_13112636_13116266_13116341_13118887_13119041_13122384_13122488_13123994_13124111_13125417_13125568_13125945_13126040_13127744_13127904_13132066_13132198_13133501_13133582_13136744
transcript_2193.known	chr1	+	486	4	FSM	ENSG00000171735.19	ENST00000557126.5	486	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	2079.29908061988	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGAAATAGAATAAAGTGAC	6762016	True	NA	NA	False	ACTAAA	-2	NA	6785490	6887865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_6785576_6820180_6820251_6825091_6825211_6887653
transcript_21934.known	chr10	+	3321	14	FSM	ENSG00000123240.17	ENST00000378757.6	3321	14	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	27.0968021432517	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTTAAGAATCTCTCC	13096205	True	NA	23	True	ATTAAA	-19	NA	13100168	13138308	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_13100303_13109111_13109289_13110273_13110477_13112452_13112636_13116266_13116341_13118887_13119041_13122384_13122488_13123994_13124111_13125417_13125568_13125945_13126040_13127744_13127904_13132066_13132198_13133501_13133582_13136744
transcript_2194.known	chr1	+	863	4	FSM	ENSG00000171735.19	ENST00000476163.5	863	4	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_3	2371.92256759504	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGGTCACTTGCGTCG	6761989	True	NA	15	True	AATAAA	-15	NA	6785463	6888201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_6785576_6825091_6825211_6871756_6871841_6887653
transcript_21941.nic	chr10	+	1477	10	ISM	ENSG00000123240.17	ENST00000378757.6	3321	14	-116	12295	-106	2815	5prime_fragment	TRUE	canonical	3	124	junction_1	21.3489526154746	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATTGAGGAACTAACAAGA	NA	False	NA	NA	False	NA	NA	NA	13100052	13126013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_13100303_13109111_13109289_13110273_13110477_13112452_13112636_13116266_13116341_13118887_13119041_13122384_13122488_13123994_13124111_13125417_13125568_13125945
transcript_21948.known	chr10	+	3157	20	FSM	ENSG00000065328.17	ENST00000484800.6	3157	20	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	52.7726530372243	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTCAGTTTTCTCATCTG	13154117	True	NA	-98	True	NA	NA	NA	13161578	13209736	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_13161607_13164127_13164210_13170921_13171264_13172375_13172481_13172624_13172766_13175509_13175682_13180441_13180608_13182932_13183101_13186163_13186281_13188880_13189081_13191298_13191400_13192254_13192366_13192450_13192569_13195040_13195270_13197622_13197768_13198688_13198808_13201420_13201535_13204218_13204365_13209090_13209134_13209226
transcript_2195.known	chr1	+	546	4	FSM	ENSG00000171735.19	ENST00000467404.6	546	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	2627.00911473274	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTAATCTGTGTTTTCAT	6762043	True	NA	15	True	ATTAAA	-23	NA	6785517	6872019	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_6785576_6806982_6807089_6825091_6825211_6871756
transcript_2196.known	chr1	+	538	3	FSM	ENSG00000171735.19	ENST00000490738.5	538	3	0	0	0	0	multi-exon	FALSE	canonical	3	1083	junction_1	2282.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTAATGAGTGCATTTCC	6761979	True	NA	49	True	AATAAA	-34	NA	6785453	6872053	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_6785576_6825091_6825211_6871756
transcript_21961.nic	chr10	+	2472	17	ISM	ENSG00000065328.17	ENST00000378714.8	4549	20	-55	9635	-55	-397	5prime_fragment	FALSE	canonical	3	199	junction_1	24.4680116427551	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAAGAAAAGATGAGAAAC	13154041	True	NA	NA	False	AAAAAG	-7	NA	13161502	13201475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_13161607_13164127_13164210_13170921_13171264_13172375_13172481_13172627_13172766_13175509_13175682_13180441_13180608_13182932_13183101_13186163_13186281_13188880_13189081_13191298_13191400_13192254_13192366_13192450_13192569_13195040_13195270_13197622_13197768_13198688_13198808_13201420
transcript_21965.nic	chr10	+	2331	16	ISM	ENSG00000065328.17	ENST00000378714.8	4549	20	-55	12389	-55	3141	5prime_fragment	FALSE	canonical	3	199	junction_1	25.2208027011213	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAGAACAACTTGCCTAT	13154041	True	NA	NA	False	NA	NA	NA	13161502	13198721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_13161607_13164127_13164210_13170921_13171264_13172375_13172481_13172627_13172766_13175509_13175682_13180441_13180608_13182932_13183101_13186163_13186281_13188880_13189081_13191298_13191400_13192254_13192366_13192450_13192569_13195040_13195270_13197622_13197768_13198688
transcript_21968.nic	chr10	+	2171	15	ISM	ENSG00000065328.17	ENST00000378714.8	4549	20	-55	13470	-55	2060	5prime_fragment	TRUE	canonical	3	199	junction_1	25.9170576561272	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGGGCAAAAGGCCAGGT	13154041	True	NA	-42	True	NA	NA	NA	13161502	13197640	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_13161607_13164127_13164210_13170921_13171264_13172375_13172481_13172627_13172766_13175509_13175682_13180441_13180608_13182932_13183101_13186163_13186281_13188880_13189081_13191298_13191400_13192254_13192366_13192450_13192569_13195040_13195270_13197622
transcript_21969.nic	chr10	+	2233	15	ISM	ENSG00000065328.17	ENST00000378714.8	4549	20	-55	13408	-55	2122	5prime_fragment	FALSE	canonical	3	199	junction_1	25.9170576561272	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCCTCAGGACATCCTGG	13154041	True	NA	20	True	AAGAAA	-6	NA	13161502	13197702	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_13161607_13164127_13164210_13170921_13171264_13172375_13172481_13172627_13172766_13175509_13175682_13180441_13180608_13182932_13183101_13186163_13186281_13188880_13189081_13191298_13191400_13192254_13192366_13192450_13192569_13195040_13195270_13197622
transcript_21982.nic	chr10	+	391	3	ISM	ENSG00000065328.17	ENST00000484800.6	3157	20	-76	38610	-55	-1348	5prime_fragment	FALSE	canonical	3	199	junction_1	54	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAATCTGGCCACTCTCT	13154041	True	NA	NA	False	NA	NA	NA	13161502	13171126	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_13161607_13164127_13164210_13170921
transcript_21983.known	chr10	-	870	5	FSM	ENSG00000165623.10	ENST00000378681.8	870	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	3.35410196624968	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGTATTATCTTCTCAA	-13234214	True	NA	-4	True	AATAAA	-15	NA	13234374	13221765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_13222201_13229610_13229710_13233537_13233634_13233734_13233801_13234200
transcript_21985.known	chr10	-	1541	9	FSM	ENSG00000107537.14	ENST00000263038.9	1541	9	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_4	59.1164105811576	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGGCTTTCTCCTGTGAT	-13295661	True	NA	-7	True	AATAAA	-20	NA	13300064	13277798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_13278355_13280975_13281111_13283689_13283840_13288359_13288542_13291830_13291913_13294427_13294597_13295495_13295607_13298186_13298246_13299967
transcript_21987.known	chr10	-	1732	8	FSM	ENSG00000107537.14	ENST00000396913.6	1732	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	143.257439170017	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTTTCTCCTGTGATTTC	-13299639	False	NA	-4	True	AATAAA	-23	NA	13299763	13277795	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_13278355_13280975_13281111_13283689_13283840_13288359_13288542_13291830_13291913_13294427_13294597_13295495_13295607_13299419
transcript_2199.known	chr1	+	2178	5	FSM	ENSG00000049245.13	ENST00000054666.11	2178	5	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	14.6009417504488	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGCACCTGTGCTCCTT	7767577	True	NA	12	True	AATAAA	-17	NA	7771295	7781432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_7771386_7773441_7773512_7777159_7777319_7778117_7778170_7779625
transcript_21990.nnic	chr10	-	1280	7	NIC	ENSG00000107537.14	novel	1541	9	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_3	168.457380036877	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGGCTTTCTCCTGTGAT	-13295664	True	NA	-7	True	AATAAA	-20	NA	13300067	13277798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_13278355_13280975_13281111_13283689_13283840_13294427_13294597_13295495_13295607_13298186_13298246_13299967
transcript_22.known	ERCC-00059	+	509	1	FSM	ERCC-00059A	DQ668356	509	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00059_+_0_500
transcript_2200.known	chr1	+	954	5	FSM	ENSG00000049245.13	ENST00000470357.1	954	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	66.2382064974588	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCCAAATTAGAAGGCCGG	7772694	False	NA	28	True	NA	NA	NA	7772706	7779806	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_7773199_7773441_7773512_7777159_7777319_7778117_7778170_7779625
transcript_22000.known	chr10	-	2988	8	FSM	ENSG00000086475.15	ENST00000545675.5	2988	8	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_7	1549.1114240369	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAGATAAACCTACTGTT	-13348201	False	NA	-28	True	AATAAA	-18	NA	13348298	13317438	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_13319357_13322834_13323048_13328350_13328451_13329697_13329789_13333816_13333972_13336242_13336351_13338704_13338809_13347999
transcript_22017.known	chr10	+	1670	10	FSM	ENSG00000165630.14	ENST00000378572.8	1670	10	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_6	14.0317101198995	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTGGTATAACTCAAATG	13583784	True	NA	3	True	AATAGA	-19	NA	13586964	13630859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_13587153_13597457_13597536_13600243_13600349_13605630_13605745_13610038_13610186_13611614_13611684_13613740_13613882_13614014_13614087_13616397_13616554_13630259
transcript_22025.known	chr10	-	2633	4	FSM	ENSG00000065809.14	ENST00000468747.5	2633	4	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_3	13.2748718344933	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTACTTAAGAAAGCATTTC	-14601408	True	NA	NA	False	NA	NA	NA	14604389	14519158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_14521307_14521868_14522020_14530331_14530516_14604239
transcript_22029.known	chr10	+	1762	14	FSM	ENSG00000187522.16	ENST00000378372.8	1762	14	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_3	61.935259193459	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGCAACCCTTTGTTTT	14831848	True	NA	18	True	ATTAAA	-18	NA	14838305	14871741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_14838460_14839904_14839986_14840074_14840158_14848608_14848658_14848789_14848896_14849720_14849812_14851218_14851324_14852369_14852532_14854124_14854281_14855840_14855944_14867082_14867296_14867735_14867910_14870596_14870668_14871527
transcript_22030.nic	chr10	+	1651	13	ISM	ENSG00000187522.16	ENST00000378372.8	1762	14	-142	1113	-142	-1113	5prime_fragment	TRUE	canonical	3	339	junction_3	63.3817249335765	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTACGTGATATATTAG	14837694	True	NA	NA	False	TATAAA	-36	NA	14838163	14870628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_14838460_14839904_14839986_14840074_14840158_14848608_14848658_14848789_14848896_14849720_14849812_14851218_14851324_14852369_14852532_14854124_14854281_14855840_14855944_14867082_14867296_14867735_14867910_14870596
transcript_22034.known	chr10	+	578	6	FSM	ENSG00000187522.16	ENST00000441647.1	578	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	183.389639838242	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACTTGTCATTTTCTTCT	14838301	False	NA	8	True	AATAAA	-12	NA	14838436	14849668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_14838460_14839904_14839986_14840074_14840158_14848608_14848658_14848789_14848896_14849432
transcript_22035.known	chr10	+	4660	5	FSM	ENSG00000284024.4	ENST00000640019.3	4660	5	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_4	209.974998511728	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGGTCAGTCCACTAC	14831848	True	NA	13	True	AATAAA	-18	NA	14838305	14846999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_14838460_14839904_14839986_14840074_14840158_14842133_14842847_14843370
transcript_22042.known	chr10	-	999	1	FSM	ENSG00000272853.1	ENST00000609399.1	999	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTCTAGCCGTCTTAAA	-14878566	True	NA	NA	False	ATTAAA	-33	NA	14878686	14877687	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_14877700_14878700
transcript_22043.known	chr10	-	2761	16	FSM	ENSG00000152457.18	ENST00000396817.6	2761	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	12.8176961008339	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCCAGGCATGGTGGT	-14953675	True	NA	NA	False	NA	NA	NA	14954048	14908170	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_14909331_14919737_14919833_14922980_14923070_14926842_14926898_14928015_14928153_14932853_14932956_14934379_14934521_14934702_14934776_14935462_14935565_14936537_14936594_14939809_14939870_14942113_14942436_14945104_14945190_14947524_14947610_14949035_14949088_14953901
transcript_22045.known	chr10	-	2463	15	FSM	ENSG00000152457.18	ENST00000378258.5	2463	15	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_12	9.45558899621309	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCCAGGCATGGTGGT	-14953699	True	NA	NA	False	NA	NA	NA	14954072	14908170	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_14909331_14919737_14919833_14922980_14923070_14926842_14926898_14928015_14928153_14932853_14932956_14934379_14934521_14934702_14934776_14935462_14935565_14936537_14936594_14939809_14939870_14945104_14945190_14947524_14947610_14949035_14949088_14953901
transcript_22048.known	chr10	-	5960	14	FSM	ENSG00000152457.18	ENST00000378278.7	5960	14	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_12	5.10829468181046	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTTTACTGAAAATAGTC	-14953723	True	NA	NA	False	AATAAA	-16	NA	14954096	14904612	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_14909331_14919737_14919833_14922980_14923070_14926842_14926898_14928015_14928153_14932853_14932956_14934379_14934521_14934702_14934776_14935462_14935565_14936537_14936594_14939809_14939870_14945104_14945190_14949035_14949088_14953901
transcript_2205.known	chr1	+	6365	22	FSM	ENSG00000049246.15	ENST00000377532.8	6365	22	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_18	8.82893614082041	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATTGTCCTGCCCTGTGT	7783718	True	NA	10	True	AATAAA	-22	NA	7784290	7845177	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_7784377_7784653_7785006_7785440_7785587_7786720_7786837_7788044_7788247_7793956_7794009_7798524_7798674_7801112_7801192_7803046_7803154_7803691_7803849_7808892_7808999_7809892_7810022_7810437_7810589_7819284_7819421_7820114_7820240_7820466_7820641_7826479_7826711_7827117_7827816_7829833_7830162_7835761_7835946_7836998_7837150_7842671
transcript_22054.known	chr10	-	2637	13	FSM	ENSG00000152457.18	ENST00000378246.6	2637	13	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_9	7.8541390362025	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-14953722	True	NA	NA	False	NA	NA	NA	14954095	14907878	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_14909331_14919737_14919833_14922980_14923070_14926842_14926898_14928015_14928153_14932853_14932956_14934379_14934521_14934702_14934776_14935462_14935565_14939809_14939870_14945104_14945190_14949035_14949088_14953901
transcript_22057.known	chr10	+	1292	6	FSM	ENSG00000152455.16	ENST00000378325.7	1292	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	73.0846085027484	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTCAGCTTCATTTCG	14872863	True	NA	9	True	ATTAAA	-9	NA	14878862	14903085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_14878920_14881499_14881646_14896845_14896978_14899538_14899686_14901132_14901263_14902405
transcript_22058.known	chr10	+	3059	6	FSM	ENSG00000152455.16	ENST00000354919.11	3059	6	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	65.6676480468122	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	14872866	True	NA	NA	False	NA	NA	NA	14878865	14904315	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_14878920_14881499_14881646_14896845_14897518_14899538_14899686_14901132_14901263_14902405
transcript_2206.known	chr1	+	1088	7	FSM	ENSG00000116288.13	ENST00000493678.5	1088	7	0	0	0	0	multi-exon	FALSE	canonical	3	3700	junction_1	429.298426375976	1070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGTGTGGTGGCTCATG	7904171	True	NA	NA	False	ATTAAA	-15	NA	7961691	7985505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_7961736_7962762_7962876_7965323_7965426_7969344_7969405_7970893_7970964_7977651_7977739_7984893
transcript_22061.nic	chr10	+	1880	6	NIC	ENSG00000152455.16	novel	3059	6	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	84.9635215842658	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTCAGCTTCATTTCG	14872856	True	NA	9	True	ATTAAA	-9	NA	14878855	14903085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_14878961_14881499_14881646_14896845_14897518_14899538_14899686_14901132_14901263_14902405
transcript_22063.known	chr10	+	2959	5	FSM	ENSG00000152455.16	ENST00000378331.5	2959	5	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	38.3210125127194	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	14872820	True	NA	NA	False	NA	NA	NA	14878819	14904315	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_14878920_14896845_14897518_14899538_14899686_14901132_14901263_14902405
transcript_22068.nnic	chr10	-	1077	5	NNC	ENSG00000176244.7	novel	3370	4	NA	NA	-42	-1029	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.6731759484026	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAAGTCTGTCCATAGCA	-15086453	True	NA	NA	False	AAAACA	-30	NA	15088818	15076503	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_15076549_15077854_15078604_15078690_15078754_15078922_15079041_15088716
transcript_2207.known	chr1	+	1127	7	FSM	ENSG00000116288.13	ENST00000338639.10	1127	7	0	0	0	0	multi-exon	FALSE	canonical	3	1587	junction_1	1206.66054326255	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGTGTGGTGGCTCATG	7904190	True	NA	NA	False	ATTAAA	-15	NA	7961710	7985505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_7961794_7962762_7962876_7965323_7965426_7969344_7969405_7970893_7970964_7977651_7977739_7984893
transcript_22070.known	chr10	-	3370	4	FSM	ENSG00000176244.7	ENST00000356189.6	3370	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	6.68331255192114	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAATCTCTCTGTATTAT	-15086411	True	NA	-3	True	ATTAAA	-21	NA	15088776	15075474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_15078604_15078690_15078754_15078922_15079041_15088716
transcript_22073.known	chr10	-	2457	13	FSM	ENSG00000152465.18	ENST00000378150.1	2457	13	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_11	23.3670886790232	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCGCTTGAACCTGAGAGG	-15167316	True	NA	NA	False	NA	NA	NA	15168628	15108293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_15109216_15109701_15109840_15112795_15112964_15119342_15119514_15128349_15128459_15130141_15130313_15132816_15132934_15133052_15133145_15133244_15133364_15135273_15135419_15140986_15141030_15141421_15141558_15168502
transcript_22076.known	chr10	-	5003	12	FSM	ENSG00000152465.18	ENST00000378165.9	5003	12	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_1	13.2284441843019	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATAGTTTCTTGTAGATT	-15167381	True	NA	NA	False	ATTAAA	-45	NA	15168693	15105769	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_15109216_15109701_15109840_15112795_15112964_15119342_15119514_15128349_15128459_15130141_15130313_15132816_15132934_15133052_15133145_15133244_15133364_15135273_15135419_15141421_15141558_15168502
transcript_22083.known	chr10	+	1296	3	FSM	ENSG00000152464.15	ENST00000378203.5	1296	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	41	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGATTCATAGGGTCCTG	15097132	False	NA	3	True	AATAAA	-15	NA	15097179	15104251	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_15097410_15102217_15102337_15103304
transcript_22086.known	chr10	+	1484	3	FSM	ENSG00000152464.15	ENST00000378197.5	1484	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	41	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATAGGGTCCTGTTTGGT	15095250	True	NA	9	True	AATAAA	-21	NA	15097354	15104257	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_15097767_15102217_15102337_15103304
transcript_22089.known	chr10	+	1030	2	FSM	ENSG00000152464.15	ENST00000378202.5	1030	2	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCATAGGGTCCTGTTTG	15096673	False	NA	7	True	AATAAA	-19	NA	15097330	15104255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_15097410_15103304
transcript_2209.known	chr1	+	977	7	FSM	ENSG00000116288.13	ENST00000377491.5	977	7	0	0	0	0	multi-exon	FALSE	canonical	2	41	junction_1	1781.06023355628	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGCAGAATAAACAGGGCA	7904373	False	NA	-2	True	NA	NA	NA	7961893	7985250	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_7962082_7962762_7962876_7965323_7965426_7969344_7969405_7970893_7970964_7977651_7977739_7984893
transcript_22092.known	chr10	+	863	2	FSM	ENSG00000152464.15	ENST00000441850.1	863	2	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCGTCATTGGCTTAAAAT	15095315	False	NA	NA	False	NA	NA	NA	15097419	15103820	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_15097767_15103304
transcript_22094.nic	chr10	-	279	2	ISM	ENSG00000152465.18	ENST00000378150.1	2457	13	-96	33207	-31	-8684	5prime_fragment	FALSE	canonical	3	64	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAAACCAAATTCCGGAG	-15167412	True	NA	NA	False	AAAAAG	-27	NA	15168724	15141500	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_15141558_15168502
transcript_22095.known	chr10	-	4182	8	FSM	ENSG00000148468.17	ENST00000378116.9	4182	8	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	9.8519655140381	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTTGTGGTCATTTGA	-15371276	False	NA	-3	True	AATAAA	-19	NA	15371289	15211642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_15214602_15215995_15216111_15220943_15221061_15248638_15248816_15254720_15254880_15275854_15275948_15283877_15284106_15370955
transcript_22104.known	chr10	-	2364	15	FSM	ENSG00000148481.14	ENST00000277632.8	2364	15	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_10	12.5063249304225	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTACCCTTGCATTTTTTA	-15859820	True	NA	-5	True	AATAAA	-16	NA	15860507	15778173	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_15779142_15782154_15782227_15786560_15786649_15789246_15789320_15796099_15796173_15816834_15816916_15821655_15821727_15833629_15833710_15834542_15834617_15837203_15837319_15838227_15838280_15841425_15841600_15843211_15843273_15847863_15847944_15860205
transcript_22107.known	chr10	-	2307	14	FSM	ENSG00000148481.14	ENST00000477891.1	2307	14	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_10	21.1500695929584	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTGCATTTTTTACATT	-15859811	True	NA	-1	True	AATAAA	-20	NA	15860498	15778169	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_15779142_15782154_15782227_15786560_15786649_15789246_15789320_15796099_15796173_15816834_15816916_15821655_15821727_15833629_15833710_15834542_15834617_15837203_15837319_15841425_15841600_15843211_15843273_15847863_15847944_15860205
transcript_2211.known	chr1	+	795	6	FSM	ENSG00000116288.13	ENST00000377493.9	795	6	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_3	1848.56629851353	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGATTGTTTCTTGTTTTG	7904180	True	NA	29	True	AATAAA	-19	NA	7961700	7985281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_7961736_7962762_7962876_7965323_7965426_7970893_7970964_7977651_7977739_7984893
transcript_22113.known	chr10	+	3777	6	FSM	ENSG00000165983.15	ENST00000378000.5	3777	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	20.7980768341691	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGTGAATCTAAATGTATT	16436262	True	NA	2	True	AATAAA	-15	NA	16436983	16513737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_16437048_16437356_16437491_16484336_16484817_16486351_16486618_16505019_16505161_16511045
transcript_22122.known	chr10	+	3625	5	FSM	ENSG00000165983.15	ENST00000535784.7	3625	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	12.1346610995116	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAATGTATTCAGTTGAC	16436288	True	NA	10	True	AATAAA	-23	NA	16437009	16513745	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_16437048_16484336_16484817_16486351_16486618_16505019_16505161_16511045
transcript_22125.known	chr10	-	3730	9	FSM	ENSG00000148484.18	ENST00000345264.10	3730	9	0	0	0	0	multi-exon	FALSE	canonical	3	607	junction_7	42.4645072383985	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTATGTCATGGTATATT	-16807272	True	NA	0	True	ATTAAA	-24	NA	16817424	16590610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_16593497_16695022_16695156_16752538_16752654_16752917_16753001_16754870_16754990_16764389_16764511_16782033_16782085_16816972_16817085_16817314
transcript_22132.known	chr10	-	955	8	FSM	ENSG00000148484.18	ENST00000377911.1	955	8	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_7	210.230097458834	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAATGCTGCGTGTGAGGC	-16807311	True	NA	-26	True	AATAAA	-1	NA	16817463	16593312	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_16593497_16695022_16695156_16752538_16752654_16752917_16753001_16754870_16754990_16764389_16764511_16782033_16782085_16817314
transcript_22142.known	chr10	-	12918	11	FSM	ENSG00000107614.22	ENST00000377799.8	12918	11	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_7	24.4501533737521	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCATGGTCAAGGACTTCG	-17199757	True	NA	NA	False	AATAAA	-20	NA	17201672	17137335	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_17149141_17153506_17153637_17154676_17154735_17157440_17157785_17159145_17159230_17160304_17160375_17161482_17161549_17162165_17162238_17168840_17168918_17174550_17174661_17201570
transcript_22157.nic	chr10	-	1132	2	ISM	ENSG00000107614.22	ENST00000479046.1	711	3	244	1861	41	-1861	5prime_fragment	FALSE	canonical	3	169	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTGTTTCTCCTAATT	NA	False	NA	NA	False	AAAAAG	-4	NA	17201810	17173768	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_17174661_17201570
transcript_22158.known	chr10	+	1868	9	FSM	ENSG00000026025.16	ENST00000224237.9	1868	9	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	29.7108460835433	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTGTTATTTATTG	17223273	True	NA	16	True	AATAAA	-16	NA	17229277	17237593	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_17229986_17230649_17230711_17233586_17233683_17233769_17233932_17234692_17234819_17235168_17235390_17235845_17235890_17236293_17236380_17237229
transcript_22160.known	chr10	-	918	3	FSM	ENSG00000229124.8	ENST00000605833.2	1901	3	33	950	33	-864	multi-exon	FALSE	canonical	2	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGTTAGAAATTCCAACT	-17229959	True	NA	NA	False	NA	NA	NA	17229985	17215195	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_17215365_17216166_17216275_17229344
transcript_22162.known	chr10	-	6994	8	FSM	ENSG00000148488.17	ENST00000377602.5	6994	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	6.26620348556037	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAAGTCTTCTTGTGAA	-17454414	False	NA	-7	True	AATAAA	-18	NA	17454595	17315420	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_17321347_17323064_17323158_17327013_17327127_17331407_17331553_17359513_17359601_17390530_17390621_17453558_17453658_17454154
transcript_22165.nnic	chr10	-	991	4	NNC	ENSG00000148488.17	novel	6994	8	NA	NA	74	-66320	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	9.41629792788369	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTTGTGTTGTTTGTTG	-17454340	True	NA	-1	True	ATTAAA	-19	NA	17454521	17386665	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_17387101_17390530_17390621_17453558_17453658_17454154
transcript_22167.known	chr10	-	2234	7	FSM	ENSG00000165996.14	ENST00000361271.8	2234	7	0	0	0	0	multi-exon	TRUE	canonical	3	186	junction_1	19.7033556081755	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACTTTCATAACTGCCTT	-17614179	True	NA	NA	False	AATAAA	-39	NA	17617374	17589031	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_17590447_17594204_17594384_17599289_17599412_17603559_17603649_17603725_17603745_17603929_17604048_17617082
transcript_22173.known	chr10	-	717	5	FSM	ENSG00000165996.14	ENST00000466335.1	717	5	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_1	14.7711712467224	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATGTGAGACAAATTGTG	-17617224	False	NA	-4	True	AATAAA	-15	NA	17617235	17599073	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_17599412_17603559_17603649_17603725_17603745_17603929_17604048_17617082
transcript_22177.known	chr10	-	773	2	FSM	ENSG00000165996.14	ENST00000326961.6	773	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTTTCTATTATGTGCT	-17614172	True	NA	NA	False	AATAAA	-17	NA	17617367	17615476	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_17615965_17617082
transcript_22178.known	chr10	-	1434	2	FSM	ENSG00000165996.14	ENST00000632169.1	1434	2	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATTATATC	-17614179	True	NA	NA	False	NA	NA	NA	17617374	17602905	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_17604048_17617082
transcript_22180.known	chr10	+	3856	14	FSM	ENSG00000136738.15	ENST00000377524.8	3856	14	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_6	15.9874210908481	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTACTGTGTTAGTTTAT	17641533	True	NA	NA	False	TATAAA	-26	NA	17644150	17716824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_17644380_17660463_17660549_17684674_17684751_17684831_17684928_17688026_17688174_17693221_17693313_17695048_17695242_17696774_17696870_17700190_17700280_17704430_17704519_17704969_17705025_17705587_17705742_17708775_17708952_17714542
transcript_22190.known	chr10	+	4385	13	FSM	ENSG00000165995.23	ENST00000617363.4	4385	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	5.76387215526353	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	18260768	18541862	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_18261318_18401923_18402044_18498354_18498478_18500811_18500949_18506470_18506548_18514979_18515042_18518335_18518417_18518909_18518969_18527587_18527698_18534075_18534228_18536100_18536197_18538179_18538366_18539229
transcript_22191.known	chr10	+	497	2	FSM	ENSG00000165995.23	ENST00000468177.1	497	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTTTTTTTTTTTTTCA	18140671	False	NA	NA	False	NA	NA	NA	18140746	18151269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_18140857_18150882
transcript_22192.nic	chr10	+	2407	2	ISM	ENSG00000165995.23	ENST00000644004.1	1183	11	-210	374919	-66	1475	5prime_fragment	FALSE	canonical	2	5	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGCTCCTTAGTGTGCA	18140595	True	NA	NA	False	AAAACA	-11	NA	18140670	18152744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_18141216_18150882
transcript_22196.known	chr10	-	2166	11	FSM	ENSG00000241058.4	ENST00000377304.7	2166	11	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_6	10.6094297678999	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGTTATGAAAAGTTGTT	-18649507	True	NA	-10	True	AATAAA	-15	NA	18651587	18545560	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_18546146_18548111_18548238_18551822_18551972_18585948_18586094_18596207_18596328_18609844_18609927_18614459_18614614_18616183_18616294_18642475_18642556_18648489_18648646_18651128
transcript_222.known	SIRV6	+	454	3	FSM	SIRV6A	SIRV611	454	3	0	0	0	0	multi-exon	FALSE	canonical	3	3029	junction_1	14741	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGGTGTTTATAGTTTA	NA	False	NA	NA	False	NA	NA	NA	1303	1950	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV6_+_1382_1468_1535_1640
transcript_22202.known	chr10	+	7170	6	FSM	ENSG00000165997.5	ENST00000377275.4	7170	6	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_1	23.8025208748989	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGTGAATCCAGTGTTTT	18649117	True	NA	21	True	AATAAA	-18	NA	18659430	18681639	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_18659684_18666574_18666636_18668529_18668678_18672621_18672706_18673983_18674136_18675167
transcript_22213.known	chr10	+	12275	14	FSM	ENSG00000120594.17	ENST00000377252.5	12275	14	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_13	24.5687057407416	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTGAATTGTCTTTATG	19816205	True	NA	27	True	ATTAAA	-41	NA	19816431	20289856	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_19817192_20001774_20001987_20046868_20047016_20068169_20068240_20143294_20143418_20147783_20147903_20164467_20164568_20176998_20177095_20177327_20177410_20211668_20211730_20217425_20217577_20219063_20219103_20245344_20245506_20279702
transcript_2222.known	chr1	-	787	4	FSM	ENSG00000116285.13	ENST00000487559.1	787	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	181.799034345315	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTTCTGATTTCAAATAT	-8021739	True	NA	NA	False	NA	NA	NA	8026296	8014039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_8014397_8015307_8015401_8015494_8015693_8026157
transcript_22224.nic	chr10	+	2132	7	ISM	ENSG00000120594.17	ENST00000377252.5	12275	14	-380	125068	-187	-115569	5prime_fragment	FALSE	canonical	3	378	junction_1	21.4741446602394	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAATTTTGGACTCTTT	19815585	False	NA	NA	False	ATTAAA	-16	NA	19816051	20164788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_19817192_20001774_20001987_20046868_20047016_20068169_20068240_20143294_20143418_20147783_20147903_20164467
transcript_22226.known	chr10	-	3008	7	FSM	ENSG00000078114.19	ENST00000417816.2	3008	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	10.5580406431412	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATAACTAGAGACTTCTT	-21174009	False	NA	NA	False	AATAAA	-7	NA	21174187	20783905	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_20785924_20787201_20787309_20812768_20812941_20961671_20961780_21020116_21020202_21172382_21172478_21173764
transcript_2223.known	chr1	-	995	3	FSM	ENSG00000116285.13	ENST00000469499.5	995	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	219	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCATACCTCCTAGACCAG	-8021739	True	NA	NA	False	NA	NA	NA	8026296	8013738	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_8014397_8015494_8015693_8026157
transcript_22230.known	chr10	-	3799	2	FSM	ENSG00000204682.8	ENST00000658000.1	3799	2	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTTCTTTGTGATTAAA	-21497248	False	NA	-3	True	AATAAA	-21	NA	21497260	21492657	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_21495946_21496749
transcript_22234.known	chr10	+	5067	24	FSM	ENSG00000078403.17	ENST00000377072.8	5067	24	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_22	35.0931786951008	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTGCCATTCTCATTTG	21533681	True	NA	11	True	AATAAA	-19	NA	21534231	21743630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_21534521_21534644_21534805_21538832_21538913_21586293_21586349_21595330_21595441_21612347_21612452_21614830_21614925_21617111_21617208_21651672_21651769_21670448_21670705_21673349_21673920_21681331_21681377_21682224_21682258_21688490_21688539_21713771_21713951_21726243_21726356_21727855_21727929_21730899_21731055_21732898_21733088_21733503_21733593_21733767_21734130_21735138_21735236_21740153_21740237_21741938
transcript_22235.known	chr10	+	4955	23	FSM	ENSG00000078403.17	ENST00000631589.1	4955	23	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	31.1052598459271	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTGCCATTCTCATTTG	21524013	True	NA	11	True	AATAAA	-19	NA	21524674	21743630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_21524776_21534644_21534805_21538832_21538913_21586293_21586349_21595330_21595441_21612347_21612452_21614830_21614925_21617111_21617208_21651672_21651769_21670448_21670705_21673349_21673920_21681331_21681377_21682224_21682258_21713771_21713951_21726243_21726356_21727855_21727929_21730899_21731055_21732898_21733088_21733503_21733593_21733767_21734130_21735138_21735236_21740029_21740237_21741938
transcript_22236.known	chr10	+	5143	23	FSM	ENSG00000078403.17	ENST00000307729.12	5143	23	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	30.2987875817766	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTGCCATTCTCATTTG	21533681	True	NA	11	True	AATAAA	-19	NA	21534231	21743630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_21534521_21534644_21534805_21538832_21538913_21586293_21586349_21595330_21595441_21612347_21612452_21614830_21614925_21617111_21617208_21651672_21651769_21670448_21670705_21673349_21673920_21681331_21681377_21682224_21682258_21713771_21713951_21726243_21726356_21727855_21727929_21730899_21731055_21732898_21733088_21733503_21733593_21733767_21734130_21735138_21735236_21740029_21740237_21741938
transcript_2226.nnic	chr1	+	2475	9	NNC	ENSG00000162426.16	novel	2496	9	NA	NA	-20	0	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_3	4.7368238303741	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTCTAGGCATTGCT	8317691	True	NA	9	True	AATAAA	-17	NA	8318093	8344165	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_8318187_8324305_8324727_8325297_8325350_8325817_8326043_8330208_8330937_8335436_8335591_8337815_8337993_8339492_8339699_8343746
transcript_22261.nic	chr10	+	1111	8	ISM	ENSG00000078403.17	ENST00000377072.8	5067	24	-123	126423	-123	2283	5prime_fragment	FALSE	canonical	3	25	junction_1	20.0356824547748	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGGATTTGTTGTTGC	21534087	False	NA	NA	False	GATAAA	-22	NA	21534108	21617207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_21534521_21534644_21534805_21538832_21538913_21586293_21586349_21595330_21595441_21612347_21612452_21614830_21614925_21617111
transcript_22262.nic	chr10	+	989	8	NIC	ENSG00000078403.17	novel	5203	26	NA	NA	-27	2283	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	23.4085280116771	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGGATTTGTTGTTGC	21534182	False	NA	NA	False	GATAAA	-22	NA	21534204	21617207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_21534495_21534644_21534805_21538832_21538913_21586293_21586349_21595330_21595441_21612347_21612452_21614830_21614925_21617111
transcript_22264.nic	chr10	+	731	7	NIC	ENSG00000078403.17	novel	4955	23	NA	NA	-62	2283	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	21.4197468602119	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGGATTTGTTGTTGC	21524551	False	NA	NA	False	GATAAA	-22	NA	21524583	21617207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_21524776_21538832_21538913_21586293_21586349_21595330_21595441_21612347_21612452_21614830_21614925_21617111
transcript_22267.known	chr10	+	1069	4	FSM	ENSG00000078403.17	ENST00000377100.8	1069	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	24.3629956194955	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGCCTACTGTGTTGTT	21533681	True	NA	8	True	AATAAA	-20	NA	21534231	21557182	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_21534521_21534644_21534805_21538832_21538913_21556642
transcript_22268.known	chr10	+	785	4	FSM	ENSG00000078403.17	ENST00000652497.1	785	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	27.3292679903595	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTCACTTCTTCAAATG	21534262	False	NA	-6	True	AATAAA	-6	NA	21534475	21557168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_21534495_21534644_21534805_21538832_21538913_21556642
transcript_2227.known	chr1	+	2496	9	FSM	ENSG00000162426.16	ENST00000471889.7	2496	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	4.51213641194501	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTCTAGGCATTGCT	8317711	True	NA	9	True	AATAAA	-17	NA	8318113	8344165	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_8318187_8324305_8324727_8325297_8325391_8325817_8326043_8330208_8330937_8335436_8335591_8337815_8337993_8339492_8339699_8343746
transcript_22271.known	chr10	+	319	3	FSM	ENSG00000078403.17	ENST00000471315.5	319	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	32	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAACTGCACTCCTGTTGT	21534254	False	NA	NA	False	ATTAAA	-25	NA	21534467	21538964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_21534495_21534644_21534805_21538832
transcript_22275.known	chr10	-	2100	12	FSM	ENSG00000136770.11	ENST00000376980.8	2100	12	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_5	10.0165152878831	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGTGCTATACTGTTTA	-22002515	True	NA	-12	True	AATAAA	-15	NA	22003730	21756547	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_21756756_21759169_21759619_21766260_21766310_21805979_21806100_21882281_21882440_21904521_21904613_21918778_21918873_21919831_21919930_21920797_21920964_21928505_21928553_21929039_21929142_22003212
transcript_22283.nic	chr10	-	919	5	ISM	ENSG00000136770.11	ENST00000376980.8	2100	12	-45	163341	-6	0	5prime_fragment	FALSE	canonical	3	135	junction_1	8.15475321515004	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGCAGCAAGAGTGTGG	NA	False	NA	NA	False	AAAAAG	-18	NA	22003775	21919888	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_21919930_21920797_21920964_21928505_21928553_21929039_21929142_22003212
transcript_22284.nic	chr10	-	878	4	ISM	ENSG00000136770.11	ENST00000376980.8	2100	12	-45	164250	-6	-188	5prime_fragment	FALSE	canonical	3	140	junction_3	7.25718035235908	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTGTTAGTAATAAATC	NA	False	NA	NA	False	AAAACA	-5	NA	22003775	21920797	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_21920964_21928505_21928553_21929039_21929142_22003212
transcript_22286.known	chr10	-	1013	3	FSM	ENSG00000136770.11	ENST00000376946.2	1013	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	70	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATGTGGCACTTAAG	-22002554	True	NA	NA	False	AAGAAA	-13	NA	22003769	21920609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_21920964_21929039_21929142_22003212
transcript_22289.known	chr10	+	3540	10	FSM	ENSG00000168283.14	ENST00000376663.8	3540	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	3.55902608401044	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGGTGAATTTAACTCAT	22321029	False	NA	5	True	AGTAAA	-20	NA	22321098	22331484	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_22321697_22326430_22326562_22326889_22326987_22327594_22327651_22327741_22327793_22327949_22328059_22328133_22328180_22328599_22328699_22329047_22329129_22329212
transcript_22291.known	chr10	+	926	8	FSM	ENSG00000148444.16	ENST00000376836.8	926	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	4.29997626951212	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGATGATATTTTGTTTG	22316318	True	NA	7	True	AATAAA	-22	NA	22316387	22320306	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_22316557_22317883_22317996_22318104_22318169_22318271_22318307_22318652_22318714_22318805_22318863_22318958_22319019_22319938
transcript_22293.known	chr10	-	3820	10	FSM	ENSG00000150867.14	ENST00000376573.9	3820	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_7	6.36735501417529	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTAGTTTCTAGAGCC	-22709583	True	NA	-16	True	AAGAAA	-17	NA	22714578	22534853	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_22537282_22539970_22540075_22541803_22542048_22550658_22550773_22567850_22567890_22573310_22573458_22591628_22591782_22607926_22608024_22609619_22609718_22714182
transcript_22298.known	chr10	+	1730	5	FSM	ENSG00000148450.13	ENST00000376510.8	1730	5	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_1	13.2476412994918	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTTTTTGGCTAAGT	23094064	True	NA	NA	False	AATAAA	-18	NA	23095578	23122013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_23095727_23104143_23104245_23110241_23110319_23119303_23119452_23120757
transcript_22304.nic	chr10	+	3085	12	ISM	ENSG00000120549.18	ENST00000376456.8	3203	13	111	3178	111	-3178	5prime_fragment	FALSE	canonical	3	25	junction_2	6.00413080943941	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGAGTCCTATTTCTGTTT	24208856	False	NA	NA	False	AAGAAA	-42	NA	24208901	24524764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_24209264_24219625_24219910_24380868_24381068_24432994_24433194_24438385_24438480_24473227_24474061_24495146_24495197_24501378_24501546_24513258_24513435_24520122_24520254_24521781_24521930_24524322
transcript_22307.nic	chr10	+	1957	6	ISM	ENSG00000120549.18	ENST00000376456.8	3203	13	111	53896	111	-39301	5prime_fragment	FALSE	canonical	3	25	junction_2	6.65131565932636	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGAGAGACCAGGTAAGG	24208856	False	NA	NA	False	NA	NA	NA	24208901	24474046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_24209264_24219625_24219910_24380868_24381068_24432994_24433194_24438385_24438480_24473227
transcript_22309.known	chr10	-	7381	26	FSM	ENSG00000107863.20	ENST00000396432.7	7381	26	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_19	20.8516282337855	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCATGGCTTGAAACTT	-24723701	False	NA	-14	True	AATAAA	-16	NA	24723887	24583613	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_24586107_24589270_24589303_24591224_24591331_24591641_24591684_24591886_24592013_24594949_24595040_24595116_24595191_24595716_24595796_24595887_24596044_24596739_24596883_24597446_24597584_24597944_24598010_24600645_24600931_24601977_24602104_24604311_24604349_24607498_24607602_24607744_24607904_24619472_24621370_24622732_24622763_24629995_24630051_24633401_24633481_24635010_24635104_24666984_24667010_24670217_24670398_24721836_24722280_24723561
transcript_2231.nnic	chr1	+	2423	8	NIC	ENSG00000162426.16	novel	2496	9	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	5.7569833370314	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTCTAGGCATTGCT	8317691	True	NA	9	True	AATAAA	-17	NA	8318093	8344165	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_8318187_8324305_8324727_8325817_8326043_8330208_8330937_8335436_8335591_8337815_8337993_8339492_8339699_8343746
transcript_22310.known	chr10	-	7099	25	FSM	ENSG00000107863.20	ENST00000376410.7	7099	25	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_24	14.0148111138023	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTTGCATGGCTTGAAA	-24722360	True	NA	-17	True	AATAAA	-13	NA	24723233	24583616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_24586107_24589270_24589303_24591224_24591331_24591641_24591684_24591886_24592013_24594949_24595040_24595116_24595191_24595716_24595796_24595887_24596044_24596739_24596883_24597446_24597584_24597944_24598010_24600645_24600931_24601977_24602104_24604311_24604349_24607498_24607602_24607744_24607904_24619472_24621370_24629995_24630051_24633401_24633481_24635010_24635104_24666984_24667010_24670217_24670398_24721836_24722280_24723156
transcript_22316.known	chr10	-	1939	9	FSM	ENSG00000099256.19	ENST00000320152.11	1939	9	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_6	6.95409052285056	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTCTTACTGTTTTTCT	-24951605	True	NA	-9	True	AATAAA	-26	NA	24952606	24848613	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_24849892_24851387_24851465_24855317_24855365_24856912_24856996_24858391_24858410_24871997_24872064_24937183_24937368_24942329_24942437_24952527
transcript_22320.known	chr10	-	741	4	FSM	ENSG00000099256.19	ENST00000376376.3	741	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	24.9131825880731	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTAGTCTTCTAGTTCT	-24951591	True	NA	NA	False	GATAAA	-21	NA	24952592	24908300	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_24908686_24937183_24937368_24942329_24942437_24952527
transcript_22321.known	chr10	+	3737	3	FSM	ENSG00000185875.13	ENST00000376356.5	3737	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	4	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGTAATGGACTACTGT	25015804	True	NA	NA	False	ATTAAA	-16	NA	25016611	25026664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_25016693_25021741_25021909_25023175
transcript_22322.known	chr10	+	3788	3	FSM	ENSG00000185875.13	ENST00000524413.5	3788	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	30	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGTAATGGACTACTGT	25015850	True	NA	NA	False	ATTAAA	-16	NA	25016657	25026664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_25016790_25021741_25021909_25023175
transcript_22326.known	chr10	+	2723	8	FSM	ENSG00000095777.17	ENST00000376302.5	2723	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	6.29544701043734	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCACAGCTTTATCGCTAA	25933623	True	NA	NA	False	AATAAA	-15	NA	25934273	26023481	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_25934329_25935743_25935831_25952093_25952279_25954873_25955009_25996489_25996595_25997158_25997259_26016819_26016897_26021502
transcript_22332.known	chr10	+	641	4	FSM	ENSG00000136750.13	ENST00000428517.2	641	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	2.94392028877595	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATTTTATTTTTTTCT	26216605	False	NA	6	True	AATAAA	-20	NA	26216732	26219320	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_26216886_26217609_26217670_26217841_26217992_26219042
transcript_22335.known	chr10	-	3515	10	FSM	ENSG00000136754.18	ENST00000376160.5	3515	10	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_4	73.0068489937759	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGATATCTTTTAAAATG	-26857439	True	NA	-13	True	AATAAA	-25	NA	26860973	26746592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_26748746_26751597_26751784_26755654_26755742_26759061_26759236_26765217_26765319_26768851_26768993_26770244_26770346_26777064_26777242_26823137_26823306_26860746
transcript_22336.known	chr10	-	3467	10	FSM	ENSG00000136754.18	ENST00000376137.8	3467	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	136.926942762632	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTTGATATCTTTTAAA	NA	False	NA	-16	True	AATAAA	-22	NA	26861087	26746595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_26748746_26751597_26751784_26755654_26755742_26765217_26765319_26768851_26768993_26770244_26770346_26771074_26771090_26777064_26777242_26823137_26823306_26860746
transcript_22338.known	chr10	-	3362	10	FSM	ENSG00000136754.18	ENST00000376170.8	3362	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	127.951186680075	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGATATCTTTTAAAATG	-26857358	True	NA	-13	True	AATAAA	-25	NA	26860892	26746592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_26748746_26751597_26751784_26759061_26759236_26765217_26765319_26768851_26768993_26770244_26770346_26771074_26771090_26777064_26777242_26823137_26823306_26860746
transcript_22345.known	chr10	-	3441	9	FSM	ENSG00000136754.18	ENST00000376166.5	3441	9	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	84.2576962360116	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGATATCTTTTAAAATG	-26857452	True	NA	-13	True	AATAAA	-25	NA	26860986	26746592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_26748746_26751597_26751784_26759061_26759236_26765217_26765319_26768851_26768993_26770244_26770346_26777064_26777242_26823137_26823306_26860746
transcript_22347.known	chr10	-	3380	9	FSM	ENSG00000136754.18	ENST00000536334.5	3380	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	144.138821973818	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTTGATATCTTTTAAA	NA	False	NA	-16	True	AATAAA	-22	NA	26861087	26746595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_26748746_26751597_26751784_26765217_26765319_26768851_26768993_26770244_26770346_26771074_26771090_26777064_26777242_26823137_26823306_26860746
transcript_22363.nic	chr10	+	1725	12	NIC	ENSG00000148459.16	novel	1584	12	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_5	27.314513443005	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTGTCTTGATTTACCG	26694871	True	NA	17	True	AATAAA	-22	NA	26697642	26746798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_26697841_26702161_26702195_26704676_26704742_26705285_26705395_26709637_26709769_26720134_26720360_26723805_26723918_26724013_26724124_26735239_26735321_26735465_26735580_26742496_26742578_26746332
transcript_22364.known	chr10	+	1584	12	FSM	ENSG00000148459.16	ENST00000376215.10	1584	12	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_8	12.6006690101809	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTGTCTTGATTTACCG	26694929	True	NA	17	True	AATAAA	-22	NA	26697700	26746798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_26697841_26702161_26702195_26704676_26704742_26705285_26705395_26709637_26709769_26720217_26720360_26723805_26723918_26724013_26724124_26735239_26735321_26735465_26735580_26742496_26742578_26746332
transcript_22395.known	chr10	-	3089	25	FSM	ENSG00000107890.17	ENST00000676420.1	3089	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	10.7992251522454	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAATAGACACAATAAAAA	-27099149	True	NA	-27	True	CATAAA	-39	NA	27100494	27035672	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_27035753_27037185_27037324_27037870_27038055_27039964_27040179_27043425_27043568_27044156_27044191_27046352_27046521_27048800_27048980_27053319_27053391_27060344_27060418_27060511_27060541_27061143_27061243_27063987_27064082_27066486_27066549_27067156_27067287_27077337_27077541_27077632_27077694_27079088_27079162_27082802_27082834_27086538_27086610_27092405_27092513_27093348_27093523_27093684_27093800_27098179_27098327_27100084
transcript_22396.nic	chr10	-	1527	12	ISM	ENSG00000107890.17	ENST00000676232.1	2599	24	-380	28333	-19	-975	5prime_fragment	FALSE	canonical	3	13	junction_6	6.26811424579571	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAGGAAATGAACAAGCAG	-27099168	True	NA	NA	False	AAGAAA	-5	NA	27100513	27064010	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_27064082_27066486_27066549_27067156_27067287_27077337_27077541_27077632_27077694_27079088_27079162_27082802_27082834_27086538_27086610_27092405_27092513_27093348_27093523_27093684_27093800_27100084
transcript_224.known	SIRV6	+	783	3	FSM	SIRV6A	SIRV615	783	3	0	0	0	0	multi-exon	FALSE	canonical	3	22297	junction_2	2503	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAAGAGCAATCAACTCA	NA	False	NA	NA	False	NA	NA	NA	10237	11330	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV6_+_10819_11031_11109_11205
transcript_2240.nic	chr1	-	949	2	ISM	ENSG00000142599.19	ENST00000659924.1	2990	12	-459	219294	-90	129	5prime_fragment	FALSE	canonical	3	37	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACCGAAAAAAAAGTCTCG	-8814906	True	NA	19	True	AAGAAA	-1	NA	8817730	8656063	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_8656442_8817159
transcript_22401.nic	chr10	-	793	4	ISM	ENSG00000107890.17	ENST00000676299.1	2489	13	-136	29402	-19	-15415	5prime_fragment	FALSE	canonical	3	16	junction_1	4.18993502999218	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAATGTAAATGCAGTAGA	-27099168	True	NA	NA	False	AATAAA	-8	NA	27100513	27092437	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_27092513_27093348_27093523_27093684_27093800_27100084
transcript_22404.nnic	chr10	-	2675	20	NNC	ENSG00000136758.20	novel	3994	20	NA	NA	6	-1281	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_18	313.387973860939	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTCTTTTGAGGAATGTC	-27142755	True	NA	-20	True	AATAAA	-20	NA	27154414	27111734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_27112121_27114520_27114608_27116059_27116134_27116218_27116346_27117575_27117728_27119293_27119450_27120434_27120548_27121385_27121449_27122840_27122974_27123546_27123700_27126695_27126787_27131858_27131942_27134038_27134123_27134830_27134982_27136275_27136386_27142386_27142486_27145427_27145591_27146233_27146312_27148905_27149041_27154177
transcript_22405.known	chr10	-	3994	20	FSM	ENSG00000136758.20	ENST00000326799.7	3994	20	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_17	318.346315718122	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGCTGTATATGGTCTT	-27142700	True	NA	NA	False	ATTAAA	-23	NA	27154359	27110453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_27112121_27114520_27114608_27116059_27116134_27116218_27116346_27117575_27117728_27119293_27119450_27120434_27120548_27121385_27121449_27122840_27122974_27123546_27123700_27126695_27126787_27131858_27131942_27134038_27134123_27134830_27134982_27136275_27136386_27142386_27142486_27145427_27145591_27147497_27147669_27148905_27149041_27154177
transcript_22409.known	chr10	-	4191	19	FSM	ENSG00000136758.20	ENST00000376016.8	4191	19	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_13	123.876344656404	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGAAAGATGTTGTGTG	-27142725	True	NA	49	True	GATAAA	-17	NA	27154384	27110110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_27112121_27114520_27114608_27116059_27116134_27116218_27116346_27117575_27117728_27119293_27119450_27120434_27120548_27121385_27121449_27122840_27122974_27123546_27123700_27126695_27126787_27131858_27131942_27134038_27134123_27134830_27134982_27136275_27136386_27142386_27142486_27145427_27145591_27148905_27149041_27154177
transcript_2241.known	chr1	-	414	2	FSM	ENSG00000142599.19	ENST00000468247.1	414	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCACGCCGGAGCTGTAC	-8703200	False	NA	19	True	NA	NA	NA	8703219	8656192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_8656442_8703054
transcript_22413.known	chr10	-	4127	18	FSM	ENSG00000136758.20	ENST00000613434.4	4127	18	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_15	248.894761045958	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTGAAAGATGTTGTGT	-27154406	False	NA	48	True	GATAAA	-16	NA	27154420	27110111	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_27112121_27114520_27114608_27116059_27116134_27116218_27116346_27117575_27117728_27119293_27119450_27120434_27120548_27121385_27121449_27122840_27122974_27123546_27123700_27126695_27126787_27131858_27131942_27134038_27134123_27134830_27134982_27136275_27136386_27145427_27145591_27148905_27149041_27154177
transcript_2242.nic	chr1	-	748	2	ISM	ENSG00000142599.19	ENST00000659924.1	2990	12	-459	219495	-90	-72	5prime_fragment	FALSE	canonical	3	37	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGGACCGGGACCGAGA	-8814906	True	NA	3	True	NA	NA	NA	8817730	8656264	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_8656442_8817159
transcript_22428.known	chr10	-	1747	13	FSM	ENSG00000107897.20	ENST00000375888.5	1747	13	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_9	48.9937637754938	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTTAGTTTGTGATGAT	-27240335	False	NA	NA	False	AATGAA	-23	NA	27240558	27197352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_27197443_27204439_27204550_27205197_27205249_27208245_27208446_27210813_27211082_27215534_27215642_27217979_27218184_27219722_27219858_27223206_27223240_27223337_27223453_27231747_27231821_27235091_27235213_27240318
transcript_22430.known	chr10	-	3903	13	FSM	ENSG00000107897.20	ENST00000396271.8	3903	13	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_12	28.8631830076541	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTTTTATTACTTGTT	-27239973	True	NA	-1	True	AATAAA	-18	NA	27240797	27195213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_27197443_27204439_27204550_27205197_27205249_27208245_27208446_27210813_27211082_27215534_27215642_27217979_27218184_27219722_27219858_27223337_27223453_27231747_27231821_27235091_27235213_27240318_27240485_27240673
transcript_22431.known	chr10	-	3848	13	FSM	ENSG00000107897.20	ENST00000375905.8	3848	13	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_12	41.5079476994734	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATGGCTTTTATTACTT	NA	False	NA	-4	True	AATAAA	-15	NA	27242130	27195216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_27197443_27204439_27204550_27205197_27205249_27208245_27208446_27210813_27211082_27215534_27215642_27217979_27218184_27219722_27219858_27223337_27223453_27231747_27231821_27235091_27235213_27240318_27240485_27242058
transcript_22439.known	chr10	+	4132	12	FSM	ENSG00000120539.15	ENST00000375940.9	4132	12	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_8	39.0555865783015	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATCTGTCAACATCATT	27150239	True	NA	16	True	AATAAA	-18	NA	27155351	27187953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_27155613_27158548_27158687_27159618_27159759_27161093_27161183_27165063_27165171_27165388_27165540_27167101_27167275_27169943_27171084_27173117_27173260_27180952_27181067_27181479_27181582_27186378
transcript_22442.known	chr10	+	3623	12	FSM	ENSG00000120539.15	ENST00000375946.8	3623	12	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_8	31.9242388287237	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGATTGTAATTTACTTG	27154689	False	NA	12	True	AATAAA	-17	NA	27154823	27186919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_27155613_27158548_27158687_27159618_27159759_27161093_27161183_27165063_27165171_27165388_27165540_27167101_27167275_27169943_27171084_27173120_27173260_27180952_27181067_27181479_27181582_27186378
transcript_22444.known	chr10	-	4173	12	FSM	ENSG00000107897.20	ENST00000375897.7	4173	12	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_5	12.9142115324216	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGCTTTTATTACTTGT	-27240656	False	NA	-2	True	AATAAA	-17	NA	27240879	27195214	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_27197443_27204439_27204550_27205197_27205249_27208245_27208446_27210813_27211082_27215534_27215642_27217979_27218184_27219722_27219858_27223337_27223453_27231747_27231821_27235091_27235213_27240318
transcript_22446.known	chr10	-	3698	12	FSM	ENSG00000107897.20	ENST00000677667.1	3698	12	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_6	49.1773649471024	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTAATGAGAAATGATATG	-27240589	False	NA	-17	True	AATAAA	-2	NA	27240812	27195229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_27197443_27204439_27204550_27205197_27205249_27208245_27208446_27210813_27211082_27215534_27215642_27219722_27219858_27223337_27223453_27231747_27231821_27235091_27235213_27240318_27240485_27240673
transcript_22450.known	chr10	-	3172	13	FSM	ENSG00000107897.20	ENST00000676997.1	3172	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	50.2714851801916	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTCTTTAAATAAATAAATA	-27240594	False	NA	NA	False	NA	NA	NA	27240817	27182837	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_27184316_27204439_27204550_27205197_27205249_27208245_27208446_27210813_27211082_27215534_27215642_27217979_27218184_27219722_27219858_27223337_27223453_27231747_27231821_27235091_27235213_27240318_27240485_27240673
transcript_22456.known	chr10	+	2968	11	FSM	ENSG00000120539.15	ENST00000342386.10	2968	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_9	57.2464846082273	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTAATTTACTTGCATAT	27150257	True	NA	17	True	AATAAA	-22	NA	27155369	27186924	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_27155613_27158548_27158687_27159618_27159759_27161093_27161183_27165063_27165171_27165388_27165540_27167101_27167275_27169943_27171084_27173120_27173260_27181479_27181582_27186378
transcript_22472.known	chr10	-	1999	4	FSM	ENSG00000107897.20	ENST00000677902.1	1999	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	59.7011073785254	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCAGAGTTTCGTTCTTT	-27239981	True	NA	NA	False	NA	NA	NA	27240805	27230230	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_27231821_27235091_27235213_27240318_27240475_27240673
transcript_22473.known	chr10	-	3792	13	FSM	ENSG00000107897.20	ENST00000677248.1	3792	13	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_6	60.8487994038411	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTAATGAGAAATGATATG	-27240650	False	NA	-17	True	AATAAA	-2	NA	27240873	27195229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_27197443_27204439_27204550_27205197_27205249_27208245_27208446_27210813_27211082_27215534_27215642_27219722_27219858_27223206_27223240_27223337_27223453_27231747_27231821_27235091_27235213_27240318_27240485_27240673
transcript_22474.known	chr10	-	3474	3	FSM	ENSG00000136758.20	ENST00000477432.1	3474	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	487.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTTTTGTTCCAATTA	-27154900	True	NA	-5	True	AATAAA	-14	NA	27155266	27145418	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_27147669_27148905_27149041_27154177
transcript_22476.known	chr10	+	2622	8	FSM	ENSG00000099246.18	ENST00000621805.5	2622	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	247.12906650211	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATTTGTGTAGGAAGTA	27500002	True	NA	6	True	AATAAA	-20	NA	27504233	27539829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_27504438_27509874_27509931_27526827_27526890_27531528_27531616_27532506_27532580_27533734_27533854_27533927_27533995_27537875
transcript_22478.known	chr10	+	4875	7	FSM	ENSG00000099246.18	ENST00000356940.11	4875	7	0	0	0	0	multi-exon	FALSE	canonical	3	498	junction_5	44.2169525056724	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGACTTGGATTTTCTTTT	27500072	True	NA	12	True	AATAAA	-22	NA	27504303	27542239	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_27504438_27509874_27509931_27526827_27526890_27532506_27532580_27533734_27533854_27533927_27533995_27537875
transcript_22486.known	chr10	+	1800	7	FSM	ENSG00000099246.18	ENST00000683755.1	1800	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	220.331127069136	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATATTGTAGATTTTTTT	27500080	True	NA	28	True	AATAAA	-39	NA	27504311	27539185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_27504438_27509874_27509931_27526827_27526890_27532506_27532580_27533734_27533854_27533940_27533995_27537875
transcript_22488.known	chr10	-	3846	7	FSM	ENSG00000150051.14	ENST00000375790.9	3846	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	4.09945795874961	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATCGTATGGATTTTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	27746060	27672874	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_27675416_27675520_27675555_27734455_27734792_27735220_27735375_27741344_27741505_27743227_27743495_27745706
transcript_22489.known	chr10	-	3603	20	FSM	ENSG00000169126.16	ENST00000305242.10	3603	20	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_2	6.71130026496635	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACAGTTTCATAGTTGTT	-27998556	True	NA	-5	True	AATAAA	-20	NA	27999079	27812167	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_27812626_27860624_27860847_27862433_27862623_27907662_27907778_27935009_27935253_27936725_27936881_27939896_27940008_27940562_27940806_27944221_27944432_27944815_27944963_27961567_27961716_27968922_27969019_27971107_27971314_27981465_27981583_27983842_27983980_27984183_27984291_27985018_27985212_27987385_27987544_27994918_27995181_27998993
transcript_22494.known	chr10	-	5138	17	FSM	ENSG00000150054.19	ENST00000683449.1	5138	17	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_11	7.1370512118101	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCTTTCATCGAGGCTG	-28301339	True	NA	0	True	ATTAAA	-23	NA	28303064	28050992	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_28054245_28056479_28056624_28058494_28058604_28059649_28059744_28069771_28069853_28089670_28089842_28119650_28119716_28120193_28120391_28120593_28120669_28124030_28124117_28125009_28125092_28131559_28131692_28147482_28147564_28149981_28150060_28202152_28202272_28238567_28238736_28302860
transcript_22511.known	chr10	+	3513	14	FSM	ENSG00000095787.24	ENST00000628285.3	3513	14	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	143.130593738394	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTATAAAATTACCTTGAC	28532118	True	NA	53	True	AATAAA	-16	NA	28532770	28620986	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_28533008_28533997_28534035_28535561_28535758_28583405_28583506_28589735_28589852_28590719_28590833_28595732_28596042_28608185_28608432_28610698_28610822_28611773_28611923_28614566_28614686_28616172_28616363_28617656_28617785_28619536
transcript_22516.known	chr10	+	5554	14	FSM	ENSG00000095787.24	ENST00000442148.6	5554	14	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	115.602000351236	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCGGTGTGTTTCAATA	28533696	True	NA	NA	False	AATACA	-21	NA	28533748	28623112	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_28533894_28533997_28534035_28535561_28535758_28583398_28583506_28589735_28589852_28590719_28590833_28595732_28596042_28608185_28608432_28610698_28610822_28611773_28611923_28614566_28614686_28616172_28616363_28617656_28617785_28619536
transcript_22517.known	chr10	+	2176	13	FSM	ENSG00000095787.24	ENST00000375646.5	2176	13	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	164.364495862093	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGGGGGGGTTAATTTA	28532131	False	NA	NA	False	TTTAAA	-14	NA	28532783	28619976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_28533008_28533997_28534035_28535561_28535758_28583398_28583506_28589735_28589852_28590719_28590833_28608185_28608432_28610710_28610822_28611773_28611923_28614566_28614686_28616172_28616363_28617656_28617785_28619536
transcript_22524.known	chr10	+	827	6	FSM	ENSG00000095787.24	ENST00000651598.1	827	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	184.090629853885	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTATTAATTTTTTTTC	28532115	True	NA	NA	False	NA	NA	NA	28532767	28590832	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_28533008_28533997_28534035_28535543_28535758_28583398_28583506_28589735_28589852_28590719
transcript_2253.known	chr1	-	1781	12	FSM	ENSG00000074800.16	ENST00000234590.10	1781	12	0	0	0	0	multi-exon	FALSE	canonical	3	14937	junction_8	1512.45105651294	8787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGTGTGCCTGTGTATGT	-8636993	True	NA	-24	True	AATAAA	-25	NA	8878686	8860999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_8861430_8862886_8862946_8863234_8863344_8863890_8864093_8865284_8865483_8866278_8866502_8867116_8867251_8867987_8868058_8870451_8870511_8871890_8871987_8874823_8874918_8878579
transcript_22530.known	chr10	-	2649	3	FSM	ENSG00000254635.6	ENST00000528337.2	2649	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	13.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAAATAAATGTTCACTT	-28532336	False	NA	NA	False	AATACA	-16	NA	28532395	28522684	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_28524612_28525947_28526009_28531734
transcript_22531.known	chr10	-	2323	3	FSM	ENSG00000254635.6	ENST00000527986.5	2323	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	4.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGTTCCAACTTTTCA	-28531854	True	NA	NA	False	AATAAA	-23	NA	28532743	28522651	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_28524612_28525947_28526009_28532441
transcript_22536.nic	chr10	-	1109	2	ISM	ENSG00000254635.6	ENST00000664327.1	2157	3	0	2304	0	-2304	5prime_fragment	FALSE	canonical	3	49	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGAATCCTGAATCTCAG	-28533007	False	NA	NA	False	NA	NA	NA	28533066	28525524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_28526009_28532441
transcript_22538.known	chr10	+	1691	3	FSM	ENSG00000095739.11	ENST00000375533.6	1691	3	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_1	18.5	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATGTGCCTGTGTAATT	28673700	True	NA	4	True	TTTAAA	-24	NA	28677520	28682932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_28677974_28681257_28681546_28681982
transcript_2254.known	chr1	-	2548	9	FSM	ENSG00000074800.16	ENST00000464920.2	2548	9	0	0	0	0	multi-exon	FALSE	canonical	3	14937	junction_8	1755.45962642266	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCGTGTGCCTGTGTAT	-8871553	False	NA	-26	True	AATAAA	-23	NA	8871576	8861001	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_8861430_8862886_8862946_8863234_8863344_8863890_8864093_8865284_8865483_8866278_8866502_8867116_8867251_8867987_8868058_8870451
transcript_22542.known	chr10	-	6729	36	FSM	ENSG00000197321.16	ENST00000375400.7	6729	36	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_35	23.8150012747068	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAAGCATGTTCCTTTCT	-29732748	True	NA	-6	True	AATAAA	-42	NA	29735804	29457337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_29458334_29458433_29458590_29462276_29462402_29463491_29463636_29465594_29465751_29467741_29467876_29470275_29470484_29471137_29471244_29473837_29473990_29480536_29480814_29481583_29481729_29484655_29484832_29486084_29486231_29486409_29486558_29487162_29487300_29488600_29488757_29490846_29491020_29493213_29493392_29494913_29495001_29495091_29495182_29499115_29499264_29512734_29512862_29522409_29522636_29523450_29524028_29524471_29524716_29529704_29529845_29530606_29530669_29531253_29531289_29550596_29551264_29554782_29554935_29555050_29555109_29563200_29563293_29569254_29569313_29657968_29658069_29686552_29686652_29735750
transcript_22545.known	chr10	-	563	6	FSM	ENSG00000197321.16	ENST00000674490.1	563	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	7.6	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAGATCTTTATAGTGGG	-29732855	True	NA	NA	False	AAGAAA	-20	NA	29735911	29555051	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_29555109_29563200_29563293_29569254_29569313_29657968_29658069_29686552_29686652_29735754
transcript_22546.nic	chr10	-	806	6	ISM	ENSG00000197321.16	ENST00000674475.1	7275	39	-125	97691	-125	0	5prime_fragment	FALSE	canonical	2	13	junction_5	21.8394139115499	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAGATCTTTATAGTGGG	NA	False	NA	NA	False	AAGAAA	-20	NA	29737084	29555051	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_29555109_29563200_29563293_29569254_29569313_29657968_29658069_29686552_29686652_29736684
transcript_22548.nic	chr10	-	759	4	ISM	ENSG00000197321.16	ENST00000375398.6	8201	37	1	97704	0	0	5prime_fragment	FALSE	canonical	0	0	junction_3	31.7944789057611	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAGATCTTTATAGTGGG	-29634820	False	151	NA	False	AAGAAA	-20	NA	29634971	29555051	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_29555109_29563200_29563293_29569254_29569313_29634419
transcript_22550.known	chr10	-	9324	4	FSM	ENSG00000165757.9	ENST00000375377.2	9324	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	1.69967317119759	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCTATGTCCGTTGTCTT	-30059406	True	NA	-2	True	AATAAA	-15	NA	30059586	30012802	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_30017918_30026102_30029867_30047531_30047872_30059481
transcript_22555.known	chr10	-	5560	9	FSM	ENSG00000107951.15	ENST00000263063.9	5560	9	0	0	0	0	multi-exon	FALSE	canonical	3	640	junction_5	76.2789903905394	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTCTGCTGTCATTTC	-30348960	True	NA	NA	False	AATAAA	-18	NA	30349278	30309800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_30313972_30315962_30316037_30316117_30316211_30322390_30322618_30326423_30326636_30336802_30337028_30340225_30340451_30341467_30341641_30349118
transcript_22556.known	chr10	-	695	3	FSM	ENSG00000107951.15	ENST00000421701.1	695	3	0	0	0	0	multi-exon	FALSE	canonical	3	803	junction_2	20.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGTATTGATGACTGGC	-30348843	False	NA	NA	False	NA	NA	NA	30349161	30339971	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_30340451_30341467_30341641_30349118
transcript_22558.known	chr10	+	2850	9	FSM	ENSG00000107968.10	ENST00000263056.6	2850	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	5.65132727772866	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGTGAAGCCTGTGAT	30434000	True	NA	5	True	AATAAA	-18	NA	30434183	30461833	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_30434379_30437175_30437407_30438915_30439275_30447781_30447950_30450257_30450520_30451637_30451745_30458083_30458237_30459254_30459502_30460705
transcript_22559.known	chr10	+	2782	8	FSM	ENSG00000107968.10	ENST00000542547.5	2782	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	4.99795876701026	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGTGAAGCCTGTGAT	30433512	True	NA	5	True	AATAAA	-18	NA	30434020	30461833	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_30434379_30438915_30439275_30447781_30447950_30450257_30450520_30451637_30451745_30458083_30458237_30459254_30459502_30460705
transcript_22560.nic	chr10	+	939	2	ISM	ENSG00000107968.10	ENST00000415139.5	1026	4	-146	11048	-26	-11	5prime_fragment	FALSE	canonical	3	42	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGATCATATTTTAGTAG	30433976	False	NA	14	True	ATTAAA	-17	NA	30433994	30439470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_30434379_30438915
transcript_22563.known	chr10	-	3164	7	FSM	ENSG00000183621.15	ENST00000436087.6	3164	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	4.87909372276815	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATGCATGTGTCCTTC	-31031839	True	NA	NA	False	AATATA	-29	NA	31031937	30844637	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_30845574_30848530_30850368_30876997_30877066_30908932_30909016_30941574_30941652_30984368_30984427_31031832
transcript_22565.known	chr10	-	3106	6	FSM	ENSG00000183621.15	ENST00000413025.5	3106	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	6.06630035524124	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATGCATGTGTCCTTC	-31031839	True	NA	NA	False	AATATA	-29	NA	31031937	30844637	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_30845574_30848530_30850368_30876997_30877066_30908932_30909016_30941574_30941652_31031832
transcript_22569.known	chr10	-	585	2	FSM	ENSG00000237036.6	ENST00000441257.1	585	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATATCAAGAAAGTCGTC	-31318593	True	NA	NA	False	NA	NA	NA	31319027	31318087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_31318541_31318895
transcript_22570.known	chr10	-	2503	1	FSM	ENSG00000237036.6	ENST00000607166.1	2503	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGTGTGACGGTTGCTT	-31318596	True	NA	1	True	AATAAA	-19	NA	31319030	31316527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_31316500_31319000
transcript_22571.known	chr10	-	4958	19	FSM	ENSG00000165322.18	ENST00000375245.8	4958	19	0	0	0	0	multi-exon	TRUE	canonical	3	55	junction_15	33.2636772203889	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGTAGTTGCAGATTT	-31921062	True	NA	27	True	NA	NA	NA	31928876	31805403	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_31807833_31808648_31808752_31808993_31809129_31809229_31809308_31810648_31810748_31812706_31812824_31814258_31814362_31817787_31817887_31820386_31820489_31826303_31826386_31831738_31831801_31839304_31839320_31839636_31839712_31843460_31843587_31852516_31852598_31861394_31861659_31908171_31908927_31910524_31910564_31928682
transcript_22572.known	chr10	-	5084	19	FSM	ENSG00000165322.18	ENST00000396144.8	5084	19	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_11	40.7514674430926	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGTAGTTGCAGATTT	-31921062	True	NA	27	True	NA	NA	NA	31928876	31805403	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_31807833_31808648_31808752_31808993_31809129_31809229_31809308_31810648_31810748_31812706_31812824_31814258_31814362_31817787_31817887_31820386_31820489_31826303_31826386_31831738_31831801_31839636_31839712_31843460_31843587_31852516_31852598_31854065_31854207_31861394_31861659_31908171_31908927_31910524_31910564_31928682
transcript_22578.nic	chr10	-	1534	11	ISM	ENSG00000170759.11	ENST00000302418.5	5866	26	-30	25734	-30	-17542	5prime_fragment	FALSE	canonical	3	415	junction_7	99.943183859631	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGATCCTGCGGAACACTA	-32048916	False	NA	NA	False	AAAAAG	-27	NA	32056455	32034748	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_32034839_32035521_32035668_32035889_32035995_32037253_32037379_32037519_32037608_32038162_32038219_32038777_32038827_32039326_32039432_32040383_32040458_32048463_32048552_32055847
transcript_22582.known	chr10	-	5866	26	FSM	ENSG00000170759.11	ENST00000302418.5	5866	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	134.906403109712	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAATGACTTTCTTAAAAC	-32048886	True	NA	-15	True	AATAAA	-19	NA	32056425	32009014	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_32011517_32015508_32015660_32017142_32017360_32018051_32018157_32018315_32018388_32018501_32018563_32019857_32019960_32021021_32021132_32021225_32021288_32022139_32022258_32022847_32023037_32028427_32028572_32031072_32031280_32032705_32032775_32033844_32034039_32034689_32034839_32035521_32035668_32035889_32035995_32037253_32037379_32037519_32037608_32038162_32038219_32038777_32038827_32039326_32039432_32040383_32040458_32048463_32048552_32055847
transcript_22583.known	chr10	-	2913	15	FSM	ENSG00000120616.16	ENST00000263062.8	2913	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5.25716226704491	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTCATGCTTCAATTTT	-32344437	True	NA	NA	False	NA	NA	NA	32347185	32268930	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_32269136_32271553_32271918_32272025_32272168_32273013_32273083_32273162_32273282_32284697_32285051_32286693_32286843_32286925_32287016_32287097_32287275_32291162_32291323_32292495_32292645_32292987_32293195_32293591_32293738_32305771_32305932_32346762
transcript_22585.known	chr10	-	3404	15	FSM	ENSG00000120616.16	ENST00000667706.1	3404	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	5.40974177964614	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATACATACAGAATTTTAC	-32344430	True	NA	87	True	NA	NA	NA	32347178	32268480	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_32269136_32271553_32271918_32272025_32272168_32273162_32273282_32273921_32274039_32284697_32285051_32286693_32286843_32286925_32287016_32287097_32287275_32291162_32291323_32292495_32292645_32292987_32293195_32293591_32293738_32305771_32305932_32346762
transcript_22586.known	chr10	-	3997	14	FSM	ENSG00000120616.16	ENST00000319778.11	3997	14	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	3.77315337490176	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTAGTGGTCTTTTGCTT	-32344410	True	NA	-33	True	AATAAA	-29	NA	32347158	32267750	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_32269136_32271553_32271918_32272025_32272168_32273162_32273282_32284697_32285051_32286693_32286843_32286925_32287016_32287097_32287275_32291162_32291323_32292495_32292645_32292987_32293195_32293591_32293738_32305771_32305932_32346762
transcript_22589.known	chr10	-	3909	14	FSM	ENSG00000120616.16	ENST00000375110.6	3909	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	4.67651820109867	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTAGTGGTCTTTTGCTT	-32378397	True	NA	-33	True	AATAAA	-29	NA	32378798	32267750	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_32269136_32271553_32271918_32272025_32272168_32273162_32273282_32284697_32285051_32286693_32286843_32286925_32287016_32287097_32287275_32291162_32291323_32292495_32292645_32292987_32293195_32293591_32293738_32305771_32305932_32378490
transcript_22595.nic	chr10	-	1147	5	ISM	ENSG00000120616.16	ENST00000495790.1	7386	7	-474	10683	-75	-10683	5prime_fragment	FALSE	canonical	2	9	junction_3	2.54950975679639	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAAGAGAGCTATTGCAC	-32347279	False	NA	NA	False	GATAAA	-15	NA	32347293	32292541	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_32292645_32292987_32293195_32293591_32293738_32305771_32305932_32346762
transcript_22603.known	chr10	-	907	2	FSM	ENSG00000120616.16	ENST00000480402.1	907	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTTGTCTTTTGGTTTT	-32347204	False	NA	-1	True	ATTAAA	-16	NA	32347218	32345111	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_32345563_32346762
transcript_22604.known	chr10	-	871	2	FSM	ENSG00000120616.16	ENST00000469059.2	871	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTTGTCTTTTGGTTTT	-32344373	True	NA	-1	True	ATTAAA	-16	NA	32347121	32345111	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_32345624_32346762
transcript_22606.nnic	chr10	-	667	3	ISM	ENSG00000120616.16	ENST00000495790.1	7386	7	-369	11798	-3	-11798	5prime_fragment	FALSE	canonical	2	9	junction_1	3	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACATCTGCCCATTGCAA	-32344440	True	NA	NA	False	AATAAA	-14	NA	32347188	32293656	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_32293738_32305771_32305932_32346762
transcript_22608.nnic	chr10	-	1033	2	ISM	ENSG00000120616.16	ENST00000495790.1	7386	7	-546	23643	-147	-23643	5prime_fragment	FALSE	canonical	3	15	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAGATATAGAAATAGTTT	-32347351	False	14	NA	False	AAGAAA	-13	NA	32347365	32305501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_32305932_32346762
transcript_22615.known	chr10	-	3955	17	FSM	ENSG00000150093.20	ENST00000676964.1	3955	17	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_14	618.876754693533	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGAGGAAAAGCATTTCT	-32929337	True	NA	-16	True	ATTAAA	-3	NA	32958232	32900332	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_32901636_32908367_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32920386_32922256_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932514_32932601_32933350_32933584_32935491_32935559_32958144
transcript_22616.known	chr10	-	3839	17	FSM	ENSG00000150093.20	ENST00000679187.1	3839	17	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_14	618.716132280184	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGAGGAAAAGCATTTCT	-32929352	True	NA	-16	True	ATTAAA	-3	NA	32958247	32900332	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_32901636_32908367_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32920386_32922256_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932514_32932601_32933481_32933584_32935491_32935559_32958144
transcript_22617.known	chr10	-	3918	17	FSM	ENSG00000150093.20	ENST00000677999.1	3918	17	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_16	641.520264683821	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGAGGAAAAGCATTTCT	-32929356	True	NA	-16	True	ATTAAA	-3	NA	32958251	32900332	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_32901636_32908367_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32920386_32922256_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932514_32932601_32935491_32935559_32938553_32938731_32958144
transcript_22619.known	chr10	-	3982	17	FSM	ENSG00000150093.20	ENST00000417122.7	3982	17	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_15	636.710577401538	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGAGGAAAAGCATTTCT	-32929380	True	NA	-16	True	ATTAAA	-3	NA	32958275	32900332	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_32901636_32908367_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32920386_32922256_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932514_32932601_32935491_32935559_32953592_32953810_32958144
transcript_22620.known	chr10	-	4090	16	FSM	ENSG00000150093.20	ENST00000678701.1	4090	16	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_15	496.65277832931	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGAGGAAAAGCATTTCT	-32957439	False	NA	-16	True	ATTAAA	-3	NA	32957466	32900332	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_32901636_32908367_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32920386_32922256_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932514_32932601_32935491_32935559_32957010
transcript_22622.known	chr10	-	3784	16	FSM	ENSG00000150093.20	ENST00000396033.6	3784	16	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_15	471.02679329312	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGGTTGGTGGGTAGT	-32957867	False	28895	-2	True	ATTAAA	-17	NA	32957894	32900318	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_32901636_32908367_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32920386_32922256_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932514_32932601_32935491_32935559_32957758
transcript_22623.known	chr10	-	3741	16	FSM	ENSG00000150093.20	ENST00000678479.1	3741	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_13	499.225729393917	927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGAGGAAAAGCATTTCT	-32929352	True	NA	-16	True	ATTAAA	-3	NA	32958247	32900332	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_32901636_32908367_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32920386_32922256_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932510_32932601_32935491_32935559_32958144
transcript_22630.known	chr10	-	5614	15	FSM	ENSG00000150093.20	ENST00000676623.1	5614	15	0	0	0	0	multi-exon	FALSE	canonical	3	1456	junction_9	170.712133877652	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGAGGAAAAGCATTTCT	-32929358	True	NA	-16	True	ATTAAA	-3	NA	32958253	32900332	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_32901636_32908367_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932514_32932601_32935491_32935559_32958144
transcript_22631.known	chr10	-	4489	15	FSM	ENSG00000150093.20	ENST00000676460.1	4489	15	0	0	0	0	multi-exon	FALSE	canonical	3	1456	junction_9	163.335153745235	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCCCACCAGTATTATC	-32929358	True	NA	NA	False	NA	NA	NA	32958253	32906318	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32920386_32922256_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932514_32932601_32935491_32935559_32958144
transcript_2264.known	chr1	+	1025	3	FSM	ENSG00000234546.5	ENST00000412639.4	1034	3	0	9	0	0	multi-exon	FALSE	canonical	2	13	junction_2	4	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGTCATTGGTGGAATG	9182149	False	NA	8	True	AATAAA	-20	NA	9182163	9192089	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_9182317_9183632_9183808_9191392
transcript_22654.nic	chr10	-	917	4	ISM	ENSG00000150093.20	ENST00000484088.5	580	5	-577	3971	-470	0	5prime_fragment	FALSE	canonical	3	1748	junction_1	34.6538437823121	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAATAAAAATGTAA	-32958768	True	NA	NA	False	NA	NA	NA	32958795	32929931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_32930045_32932514_32932601_32935491_32935559_32958144
transcript_22657.known	chr10	-	3779	17	FSM	ENSG00000150093.20	ENST00000676659.1	3779	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	636.832858640122	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCCTAAAATACTTAAATCG	-32929377	True	NA	-22	True	ATTAAA	-3	NA	32958272	32900413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_32901636_32906464_32906563_32908367_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32920386_32922256_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932514_32932601_32935491_32935559_32958144
transcript_22658.known	chr10	-	2213	12	FSM	ENSG00000099250.18	ENST00000374822.8	2213	12	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	6.42438536147446	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATGTACCTCTCTTCTC	-33334604	False	48	-4	True	AATAAA	-18	NA	33334642	33197620	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_33197710_33202890_33202996_33207571_33207717_33213385_33213718_33221718_33221864_33226133_33226290_33254027_33254195_33256315_33256472_33263645_33263874_33270674_33270857_33330707_33330883_33334309
transcript_22664.known	chr10	-	5962	24	FSM	ENSG00000148498.16	ENST00000545693.5	5962	24	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_4	62.2016052649972	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTGTCTCTGGTGTTC	-34811844	True	NA	0	True	AATAAA	-21	NA	34815325	34109559	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_34111563_34119612_34119741_34131462_34131584_34269656_34269900_34284134_34284246_34317106_34317339_34331116_34331345_34336198_34336244_34337274_34337427_34341626_34341817_34347964_34348116_34359146_34359318_34360070_34360260_34374873_34375003_34377966_34378107_34382539_34382923_34384128_34384255_34399329_34399414_34401825_34401918_34450316_34450449_34470084_34470264_34516978_34517160_34696317_34696420_34814875
transcript_22672.known	chr10	-	4312	22	FSM	ENSG00000108094.17	ENST00000374748.5	4312	22	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_21	115.900614238892	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTTTTTTCTTAAATAT	-35090296	False	NA	0	True	GATAAA	-16	NA	35090364	35008550	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_35010443_35011847_35011965_35013698_35013801_35016191_35016395_35025131_35025199_35028809_35028888_35029487_35029641_35031299_35031387_35031490_35031620_35032434_35032495_35033165_35033274_35035171_35035297_35038919_35039083_35044565_35044677_35044771_35044869_35049682_35049766_35054433_35054540_35060873_35060969_35062959_35063063_35071198_35071340_35089895_35090002_35090178
transcript_22673.nic	chr10	-	3192	21	FSM	ENSG00000108094.17	ENST00000691974.1	3187	21	-15	10	-3	4	multi-exon	FALSE	canonical	3	37	junction_20	88.0149987218088	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAATGCCTTTTTTATGTG	-35090310	False	NA	-28	True	AATAAA	-16	NA	35090378	35009861	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_35010443_35011847_35011965_35013698_35013801_35016191_35016395_35025131_35025199_35028809_35028888_35029487_35029641_35031299_35031387_35031490_35031620_35032434_35032495_35033165_35033274_35035171_35035297_35038919_35039083_35044565_35044677_35044771_35044869_35049682_35049766_35054433_35054540_35060873_35060969_35062959_35063063_35071198_35071340_35089895
transcript_22674.known	chr10	-	4183	21	FSM	ENSG00000108094.17	ENST00000374749.8	4183	21	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_20	70.5864540829188	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTTTTTTCTTAAATAT	-35090273	False	1968	0	True	GATAAA	-16	NA	35090341	35008550	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_35010443_35011847_35011965_35013698_35013801_35016191_35016395_35025131_35025199_35028809_35028888_35029487_35029641_35031299_35031387_35031490_35031620_35032434_35032495_35033165_35033274_35035171_35035297_35038919_35039083_35044565_35044677_35044771_35044869_35049682_35049766_35054433_35054540_35060873_35060969_35062959_35063063_35071198_35071340_35090178
transcript_22675.known	chr10	-	4233	21	FSM	ENSG00000108094.17	ENST00000374751.7	4233	21	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_20	57.8943866018114	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTTTTTTCTTAAATAT	NA	False	NA	0	True	GATAAA	-16	NA	35090642	35008550	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_35010443_35011847_35011965_35013698_35013801_35016191_35016395_35025131_35025199_35028809_35028888_35029487_35029641_35031299_35031387_35031490_35031620_35032434_35032495_35033165_35033274_35035171_35035297_35038919_35039083_35044565_35044677_35044771_35044869_35049682_35049766_35054433_35054540_35060873_35060969_35062959_35063063_35071198_35071340_35090429
transcript_22680.known	chr10	-	4115	20	FSM	ENSG00000108094.17	ENST00000626172.3	4116	20	-47	48	0	-1	multi-exon	FALSE	canonical	1	5	junction_1	103.343227715615	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCTTTTTTTCTTAAATA	NA	False	NA	-1	True	GATAAA	-15	NA	35090642	35008551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_35010443_35013698_35013801_35016191_35016395_35025131_35025199_35028809_35028888_35029487_35029641_35031299_35031387_35031490_35031620_35032434_35032495_35033165_35033274_35035171_35035297_35038919_35039083_35044565_35044677_35044771_35044869_35049682_35049766_35054433_35054540_35060873_35060969_35062959_35063063_35071198_35071340_35090429
transcript_2269.nnic	chr1	+	3200	2	NNC	ENSG00000234546.5	novel	488	3	NA	NA	37	0	intron_retention	FALSE	canonical	3	13	junction_1	0	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTCACTTCTCCCCA	9182026	False	NA	NA	False	TATAAA	-20	NA	9182040	9185386	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_9183808_9183953
transcript_227.known	SIRV6	-	276	1	FSM	SIRV6B	SIRV617	276	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTCTACTTGGGCACCT	NA	False	NA	NA	False	NA	NA	NA	1820	1544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV6_-_1500_1800
transcript_22710.known	chr10	+	1207	4	FSM	ENSG00000095794.20	ENST00000374726.7	1207	4	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_2	23.3285709425636	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGTGCATTTTAATGGA	35126858	False	NA	8	True	AATAAA	-19	NA	35126922	35179847	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_35127194_35148367_35148492_35178888_35178987_35179133
transcript_22711.known	chr10	+	415	3	FSM	ENSG00000095794.20	ENST00000482633.5	415	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	52	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTAGCTTTAAGTCTTC	35125421	True	NA	NA	False	AATACA	-29	NA	35127047	35179304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_35127194_35178888_35178987_35179133
transcript_22712.known	chr10	+	1416	3	FSM	ENSG00000095794.20	ENST00000460270.5	1416	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	29.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACTGTGTAATATAAAAGA	35125490	False	NA	-18	True	TTTAAA	-30	NA	35127116	35212435	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_35127194_35206894_35207052_35211253
transcript_22716.known	chr10	+	1030	3	FSM	ENSG00000095794.20	ENST00000474362.5	1030	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	13.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTTTAGGAAAGGATGAT	NA	False	NA	5	True	AATAAA	-21	NA	35126790	35212125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_35127194_35206894_35207052_35211655
transcript_22718.known	chr10	+	1625	3	FSM	ENSG00000095794.20	ENST00000344351.5	1625	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	36	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTGATGACATATTTTT	35195892	True	NA	42	True	TATAAA	-44	NA	35195916	35212495	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_35196143_35206894_35207052_35211253
transcript_22721.nnic	chr10	+	2060	11	NNC	ENSG00000108100.18	novel	4768	11	NA	NA	-47	-2184	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	111.086632859224	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTTCTGCGCGCTGTCTT	35334687	True	NA	14	True	AATAAA	-25	NA	35336461	35569740	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_35336816_35336943_35337208_35483403_35483479_35501500_35501536_35516522_35516624_35525963_35526000_35529972_35530031_35530123_35530244_35553018_35553186_35566022_35566186_35569053
transcript_22722.nnic	chr10	+	2559	11	NNC	ENSG00000108100.18	novel	4768	11	NA	NA	-47	-1685	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	111.086632859224	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGGTGGGTTGGGTATTC	35334687	True	NA	NA	False	TATAAA	-35	NA	35336461	35570239	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_35336816_35336943_35337208_35483403_35483479_35501500_35501536_35516522_35516624_35525963_35526000_35529972_35530031_35530123_35530244_35553018_35553186_35566022_35566186_35569053
transcript_22725.known	chr10	-	2514	1	FSM	ENSG00000229644.6	ENST00000440465.1	2514	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCCATTCCAACAAAGTTT	-36524218	False	NA	NA	False	ATTAAA	-32	NA	36524234	36521720	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_36521700_36524200
transcript_22726.known	chr10	-	1286	7	FSM	ENSG00000198105.16	ENST00000374648.7	1286	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	9.3704618645804	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTCCTAATTATTTTGC	-37857483	False	NA	NA	False	AATAAA	-14	NA	37857558	37830855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_37831313_37833024_37833117_37837616_37837713_37837984_37838112_37856295_37856338_37856434_37856533_37857184
transcript_22728.known	chr10	-	5143	6	FSM	ENSG00000198105.16	ENST00000395867.8	5143	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	7.98498591107085	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTGATTAATTCACCCT	-37857250	True	NA	NA	False	AATAAA	-19	NA	37857610	37828762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_37833117_37837616_37837713_37837984_37838112_37856295_37856338_37856434_37856533_37857184
transcript_22731.known	chr10	+	6116	5	FSM	ENSG00000189180.16	ENST00000432900.7	6116	5	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_4	26.7301328092473	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTTGTTAGTTGTATG	38007616	True	NA	45	True	NA	NA	NA	38010674	38060087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_38010784_38012297_38012351_38016870_38017016_38017290_38017387_38054374
transcript_22736.known	chr10	+	2854	4	FSM	ENSG00000189180.16	ENST00000628825.2	2854	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	64.8553947040816	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAGGGCACCTAACAAT	38007596	True	NA	27	True	AATAAA	-39	NA	38010654	38056861	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_38010784_38016870_38017016_38017290_38017387_38054377
transcript_2274.known	chr1	+	3106	3	FSM	ENSG00000171621.14	ENST00000328089.11	3106	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	2	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTTGAATTCCTCGTT	9292339	True	NA	7	True	AATAAA	-24	NA	9292893	9369532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_9293072_9355742_9356586_9367447
transcript_22740.known	chr10	-	576	2	FSM	ENSG00000215146.5	ENST00000609034.1	576	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTGTGAAGAATGTGACA	-42361107	True	NA	NA	False	ACTAAA	-12	NA	42367933	42337782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_42338241_42367815
transcript_22743.known	chr10	+	2254	5	FSM	ENSG00000185904.12	ENST00000429940.7	2254	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	2.9474565306379	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTGTGTGTGTGTCTT	42475420	True	NA	NA	False	NA	NA	NA	42475542	42495337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_42475881_42477260_42477443_42486978_42487127_42492079_42492343_42494014
transcript_22751.known	chr10	-	5982	5	FSM	ENSG00000196693.15	ENST00000359467.8	5982	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	26.0240273593462	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGAGGAACATCTTGTTT	-42636593	True	NA	-11	True	AATAAA	-20	NA	42638570	42589108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_42594700_42631928_42632025_42632294_42632440_42636919_42636973_42638473
transcript_2276.known	chr1	+	3865	7	FSM	ENSG00000171612.7	ENST00000302692.7	3865	7	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_6	25.844083784624	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAATTTTAGTTTTCTGC	9536621	True	NA	NA	False	AATAAA	-16	NA	9539464	9585173	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_9539748_9553625_9553806_9567283_9567362_9570257_9570359_9573345_9573413_9579953_9580235_9582298
transcript_22761.known	chr10	+	7759	23	FSM	ENSG00000165733.8	ENST00000374518.6	7759	23	0	0	0	0	multi-exon	FALSE	canonical	3	437	junction_1	78.1601978562338	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATGAGTCAGTGGCATT	42769728	True	NA	10	True	AATAAA	-22	NA	42782794	42834937	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_42782831_42784361_42784571_42785481_42785673_42787167_42787248_42790322_42790512_42791626_42791770_42792492_42792615_42792956_42793145_42793851_42793992_42796473_42797232_42797421_42797524_42798467_42798626_42802136_42802219_42816598_42816673_42817317_42817495_42820235_42820425_42820507_42820689_42820933_42820993_42822061_42822185_42823117_42823266_42823608_42823785_42830260_42830423_42830865
transcript_22764.nnic	chr10	+	4395	23	NNC	ENSG00000165733.8	novel	7759	23	NA	NA	-3	-3535	at_least_one_novel_splicesite	FALSE	canonical	3	173	junction_1	114.500965386237	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGCTTAGTAGTTTTC	42769725	True	NA	14	True	ATTAAA	-15	NA	42782791	42831402	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_42782999_42784361_42784571_42785481_42785673_42787167_42787248_42790322_42790512_42791626_42791770_42792492_42792615_42792956_42793145_42793851_42793992_42796473_42797232_42797421_42797524_42798467_42798626_42802136_42802219_42816598_42816673_42817317_42817495_42820235_42820425_42820507_42820689_42820933_42820993_42822061_42822185_42823117_42823266_42823608_42823785_42830260_42830423_42830865
transcript_22778.nic	chr10	+	2794	12	ISM	ENSG00000165733.8	ENST00000374518.6	7759	23	-619	36453	-619	-36453	5prime_fragment	FALSE	canonical	3	437	junction_1	62.4147683307815	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGATGATGATACTCT	NA	False	NA	14	True	AATGAA	-1	NA	42782175	42798484	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_42782831_42784361_42784571_42785481_42785673_42787167_42787248_42790322_42790512_42791626_42791770_42792492_42792615_42792956_42793145_42793851_42793992_42796473_42797232_42797421_42797524_42798467
transcript_22783.nic	chr10	+	2677	10	ISM	ENSG00000165733.8	ENST00000374518.6	7759	23	-670	37755	-670	-37755	5prime_fragment	FALSE	canonical	3	437	junction_1	63.9722161914408	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAGAAGATTACAAGGA	NA	False	NA	19	True	NA	NA	NA	42782124	42797182	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_42782831_42784361_42784571_42785481_42785673_42787167_42787248_42790322_42790512_42791626_42791770_42792492_42792615_42792956_42793145_42793851_42793992_42796473
transcript_22785.nnic	chr10	+	2039	10	NNC	ENSG00000165733.8	novel	7759	23	NA	NA	-12	-37755	at_least_one_novel_splicesite	FALSE	canonical	3	131	junction_1	146.70757005387	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAGAAGATTACAAGGA	42769716	True	NA	19	True	NA	NA	NA	42782782	42797182	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_42782851_42784361_42784571_42785481_42785673_42787167_42787248_42790322_42790512_42791626_42791770_42792492_42792615_42792956_42793145_42793851_42793992_42796473
transcript_22786.nnic	chr10	+	2178	10	NNC	ENSG00000165733.8	novel	7759	23	NA	NA	-3	-37755	at_least_one_novel_splicesite	FALSE	canonical	3	173	junction_1	134.296521010619	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAGAAGATTACAAGGA	42769725	True	NA	19	True	NA	NA	NA	42782791	42797182	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_42782999_42784361_42784571_42785481_42785673_42787167_42787248_42790322_42790512_42791626_42791770_42792492_42792615_42792956_42793145_42793851_42793992_42796473
transcript_2279.nnic	chr1	+	1413	6	NIC	ENSG00000171612.7	novel	3865	7	NA	NA	-51	-2402	combination_of_known_splicesites	FALSE	canonical	3	36	junction_3	88.3981900267194	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATTTGGCTTGTGTCCTC	9536570	True	NA	8	True	ATTAAA	-22	NA	9539413	9582771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_9539748_9553625_9553806_9567283_9567362_9573345_9573413_9579953_9580235_9582298
transcript_22798.known	chr10	+	4159	19	FSM	ENSG00000165731.21	ENST00000340058.6	4159	19	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	10.7124307624136	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTTTCCTAACTTCAT	43075580	True	NA	16	True	ATTAAA	-13	NA	43077068	43127504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_43077332_43100458_43100723_43102341_43102630_43104951_43105194_43106375_43106572_43109030_43109231_43111206_43111466_43112098_43112225_43112852_43112964_43113555_43113676_43114479_43114737_43116583_43116732_43118372_43118481_43119530_43119746_43120080_43120204_43121945_43122017_43123670_43123809_43124882_43124983_43126574
transcript_228.known	SIRV6	-	189	1	FSM	SIRV6C	SIRV618	189	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGTCTAGCTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	2547	2358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV6_-_2400_2500
transcript_22810.nnic	chr10	+	2591	15	NIC	ENSG00000165731.21	novel	3457	16	NA	NA	-53	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	14.3848347014401	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTCCTCTCTGTGATGC	NA	False	NA	-32	True	NA	NA	NA	43077010	43126775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_43077332_43100458_43100723_43102341_43102630_43112098_43112225_43112852_43112964_43113555_43113676_43114479_43114737_43116583_43116732_43118372_43118481_43119530_43119746_43120080_43120204_43121945_43122017_43123670_43123809_43124882_43124983_43126574
transcript_22815.nnic	chr10	+	2303	14	NIC	ENSG00000165731.21	novel	3457	16	NA	NA	-53	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	12.6650056006267	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTCCTCTCTGTGATGC	NA	False	NA	-32	True	NA	NA	NA	43077010	43126775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_43077332_43100458_43100723_43112098_43112225_43112852_43112964_43113555_43113676_43114479_43114737_43116583_43116732_43118372_43118481_43119530_43119746_43120080_43120204_43121945_43122017_43123670_43123809_43124882_43124983_43126574
transcript_2282.nnic	chr1	+	1284	5	NIC	ENSG00000171612.7	novel	3865	7	NA	NA	11	-2402	combination_of_known_splicesites	FALSE	canonical	3	10	junction_3	105.122547533819	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATTTGGCTTGTGTCCTC	9536632	True	NA	8	True	ATTAAA	-22	NA	9539475	9582771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_9539748_9553625_9553806_9567283_9567362_9579953_9580235_9582298
transcript_22830.known	chr10	+	737	2	FSM	ENSG00000165731.21	ENST00000684216.1	737	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCCTGCAGCTTTCATT	NA	False	NA	NA	False	AATGAA	-20	NA	43100483	43102839	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_43100723_43102341
transcript_22831.known	chr10	+	3765	8	FSM	ENSG00000169826.8	ENST00000374466.4	3765	8	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_4	7.83503382902976	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAATGTGATAAATTTAT	43137564	True	NA	NA	False	AATAAA	-24	NA	43138444	43185302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_43138568_43154896_43155811_43158714_43158932_43160493_43160596_43163865_43164045_43167003_43167099_43175950_43176033_43183249
transcript_22841.known	chr10	-	3264	13	FSM	ENSG00000198915.12	ENST00000374459.5	3264	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_11	29.2131772017736	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTGCCTGCTGTGTGTG	-43229678	False	NA	-3	True	AATAAA	-18	NA	43229739	43194534	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_43196269_43196475_43196549_43196975_43197100_43198003_43198196_43198932_43199013_43199091_43199195_43199675_43199769_43200181_43200257_43200666_43200889_43201807_43201946_43203297_43203421_43205918_43206123_43229636
transcript_22842.nic	chr10	-	3233	12	NIC	ENSG00000198915.12	novel	3264	13	NA	NA	-68	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_11	21.0108197235269	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTGCCTGCTGTGTGTG	-43202909	True	NA	-3	True	AATAAA	-18	NA	43203887	43194534	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_43196269_43196475_43196549_43196975_43197100_43198003_43198196_43198932_43199013_43199091_43199195_43199675_43199769_43200181_43200257_43200666_43200889_43201807_43201946_43203297_43203421_43203611
transcript_22843.nnic	chr10	-	3130	12	NNC	ENSG00000198915.12	novel	3264	13	NA	NA	-75	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_11	19.662440597442	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTGCCTGCTGTGTGTG	NA	False	NA	-3	True	AATAAA	-18	NA	43203894	43194534	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_43196269_43196475_43196549_43196975_43197100_43198003_43198196_43198932_43199013_43199091_43199195_43199675_43199769_43200181_43200257_43200666_43200889_43201807_43201946_43203297_43203421_43203721
transcript_22847.nic	chr10	-	1675	12	NIC	ENSG00000198915.12	novel	4104	13	NA	NA	-68	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_11	21.0108197235269	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTTGGCACTTACAAAG	-43202909	True	NA	-14	True	NA	NA	NA	43203887	43196092	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_43196269_43196475_43196549_43196975_43197100_43198003_43198196_43198932_43199013_43199091_43199195_43199675_43199769_43200181_43200257_43200666_43200889_43201807_43201946_43203297_43203421_43203611
transcript_22848.nnic	chr10	-	1572	12	NNC	ENSG00000198915.12	novel	4104	13	NA	NA	-75	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_11	19.662440597442	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTTGGCACTTACAAAG	NA	False	NA	-14	True	NA	NA	NA	43203894	43196092	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_43196269_43196475_43196549_43196975_43197100_43198003_43198196_43198932_43199013_43199091_43199195_43199675_43199769_43200181_43200257_43200666_43200889_43201807_43201946_43203297_43203421_43203721
transcript_22852.nic	chr10	-	3413	11	ISM	ENSG00000198915.12	ENST00000395809.5	4104	13	5308	-1558	-57	0	3prime_fragment	FALSE	canonical	3	47	junction_10	13.2894695153719	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTGCCTGCTGTGTGTG	-43202898	True	NA	-3	True	AATAAA	-18	NA	43203876	43194534	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_43196269_43196475_43196549_43196975_43197100_43198003_43198196_43198932_43199013_43199091_43199195_43199675_43199769_43200181_43200257_43200666_43200889_43201807_43201946_43203297
transcript_22864.known	chr10	-	636	4	FSM	ENSG00000169813.17	ENST00000477108.5	636	4	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_3	975.162322670208	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGGTCCCAACAGTGCCG	-43397266	False	NA	96	True	NA	NA	NA	43397278	43387588	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_43387937_43394629_43394689_43396455_43396591_43397184
transcript_22865.known	chr10	-	2617	4	FSM	ENSG00000169813.17	ENST00000357065.8	2617	4	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_3	946.893986791669	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGTCACGCTCCTGA	-43407800	False	17390	-1	True	TATAAA	-19	NA	43407819	43385616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_43387937_43394629_43394689_43396455_43396591_43407716
transcript_22866.known	chr10	-	2186	4	FSM	ENSG00000169813.17	ENST00000337970.7	2186	4	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_3	1017.09531947054	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGGCACAGATTACTCA	-43391776	True	NA	-32	True	AATAAA	-14	NA	43409166	43386021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_43387937_43394629_43394689_43396455_43396591_43409089
transcript_22867.known	chr10	-	2569	4	FSM	ENSG00000169813.17	ENST00000682386.1	2569	4	0	0	0	0	multi-exon	FALSE	canonical	3	842	junction_3	681.236294459484	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGGTCACGCTCCTG	-43391796	True	NA	-2	True	TATAAA	-18	NA	43409186	43385617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_43387937_43394629_43394689_43396455_43396591_43409130
transcript_2287.known	chr1	+	3815	11	FSM	ENSG00000188807.13	ENST00000340381.11	3815	11	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_9	19.4411933790084	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGCTGTCTGTATTC	9587719	True	NA	20	True	AAAAAG	-33	NA	9588910	9614877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_9589044_9595889_9596011_9596858_9597054_9598448_9598626_9601104_9601455_9602068_9602273_9607556_9607790_9609839_9609912_9610505_9610806_9611752_9611891_9612985
transcript_22870.known	chr10	-	2670	4	FSM	ENSG00000169813.17	ENST00000356053.7	2670	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_3	1049.60638124754	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGTCACGCTCCTGA	-43408863	False	NA	-1	True	TATAAA	-19	NA	43408882	43385616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_43387937_43394629_43394689_43396455_43396591_43408726
transcript_22874.known	chr10	-	715	3	FSM	ENSG00000169813.17	ENST00000498176.1	715	3	0	0	0	0	multi-exon	FALSE	canonical	3	2246	junction_2	39.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATTGAGGTGTTCAAGT	-43396805	False	NA	42	True	AAAAAG	-23	NA	43396817	43387642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_43387937_43394629_43394689_43396455
transcript_22877.known	chr10	+	760	2	FSM	ENSG00000230555.2	ENST00000442526.2	760	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGTGGT	43420586	False	NA	NA	False	NA	NA	NA	43420737	43422100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_43421067_43421669
transcript_22879.known	chr10	-	2069	4	FSM	ENSG00000196793.14	ENST00000374446.7	2069	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	13.490737563232	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGCCTTGTGTTTTTC	-43572566	True	NA	0	True	NA	NA	NA	43574616	43556343	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_43558172_43567898_43568022_43573636_43573678_43574539
transcript_22880.known	chr10	-	2027	3	FSM	ENSG00000196793.14	ENST00000426961.1	2027	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	10	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTGTGCCTTGTGTTT	-43572568	True	NA	-3	True	NA	NA	NA	43574618	43556346	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_43558172_43567898_43568022_43574539
transcript_22883.known	chr10	-	701	2	FSM	ENSG00000196793.14	ENST00000491188.1	701	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGGAAAATACTTAACACCA	-43572547	True	NA	NA	False	NA	NA	NA	43574597	43557528	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_43558172_43574539
transcript_22884.known	chr10	+	2024	5	FSM	ENSG00000198298.13	ENST00000361807.8	2024	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	28.8909587933665	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTATCTCTCTCTCTCTCTC	43604724	True	NA	3	True	AATAAA	-18	NA	43606437	43617904	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_43606547_43606996_43607075_43608613_43608741_43609254_43609351_43616290
transcript_22896.known	chr10	-	1201	3	FSM	ENSG00000169740.14	ENST00000395797.1	1201	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	53.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATGTTTTATAATTTCT	-43646063	False	NA	-13	True	AATAAA	-23	NA	43648704	43643859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_43644802_43646063_43646203_43648584
transcript_22898.known	chr10	-	1159	3	FSM	ENSG00000169740.14	ENST00000374433.7	1159	3	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	28.5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTATGTTTTATAATTT	-43646240	True	NA	-15	True	AATAAA	-21	NA	43648881	43643861	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_43644802_43646063_43646203_43648801
transcript_229.known	SIRV6	+	1969	1	FSM	SIRV6A	SIRV603	1969	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	357	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGAAGATTTCGACCGAA	NA	False	NA	NA	False	ATTAAA	-26	NA	8999	10968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV6_+_9000_11000
transcript_22904.known	chr10	-	3532	4	FSM	ENSG00000107562.17	ENST00000374429.6	3532	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	73.368173541999	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCACCAACAGTTTGAAATT	-44378249	True	NA	-29	True	AATAAA	-19	NA	44385092	44370164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_44373344_44378636_44378724_44380762_44380881_44384944
transcript_22908.known	chr10	-	1052	4	FSM	ENSG00000107562.17	ENST00000395794.2	1052	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	85.0463925683441	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAGCAATAAAATGCTAATT	-44378206	True	NA	-43	True	ACTAAA	-28	NA	44385049	44377163	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_44377906_44378636_44378724_44380762_44380881_44384944
transcript_2291.nic	chr1	+	3939	10	NIC	ENSG00000188807.13	novel	3815	11	NA	NA	-196	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_7	34.9309724958549	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGCTGTCTGTATTC	NA	False	NA	20	True	AAAAAG	-33	NA	9588714	9614877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_9589044_9595889_9596011_9596858_9597054_9598448_9598626_9601104_9601455_9602068_9602273_9607556_9607790_9610505_9610806_9611752_9611891_9612985
transcript_22912.known	chr10	-	1857	3	FSM	ENSG00000107562.17	ENST00000343575.11	1928	3	5	66	0	31	multi-exon	FALSE	canonical	3	195	junction_2	13	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACGTCCTACTGTATGTG	-44378249	True	NA	-12	True	AATAAA	-21	NA	44385092	44377132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_44378724_44380762_44380881_44384944
transcript_22925.nic	chr10	+	2620	11	NIC	ENSG00000107551.21	novel	3631	11	NA	NA	-92	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_4	29.6615913261578	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTGAAGAAGTGAGAACCA	44958447	True	NA	11	True	AATAAA	-15	NA	44959709	44994707	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_44959867_44970164_44970265_44971772_44971849_44982520_44982664_44983940_44984114_44984812_44984971_44989273_44989376_44989669_44989722_44990947_44991070_44991904_44992003_44993268
transcript_22926.nnic	chr10	+	2518	11	NNC	ENSG00000107551.21	novel	3631	11	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	30.7540241269334	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTGAAGAAGTGAGAACCA	44958499	True	NA	11	True	AATAAA	-15	NA	44959761	44994707	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_44959867_44970164_44970265_44971772_44971849_44982520_44982664_44983990_44984114_44984812_44984971_44989273_44989376_44989669_44989722_44990947_44991070_44991904_44992003_44993268
transcript_22928.known	chr10	+	3631	11	FSM	ENSG00000107551.21	ENST00000340258.10	3631	11	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_10	12.517587627015	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGCTATGGGAGAGTGTT	44958539	True	NA	NA	False	AATAAA	-22	NA	44959801	44995891	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_44959867_44970164_44970265_44971772_44971849_44982520_44982664_44984021_44984114_44984812_44984971_44989273_44989376_44989669_44989722_44990947_44991070_44991904_44992003_44993268
transcript_2293.nnic	chr1	+	3639	9	NIC	ENSG00000188807.13	novel	3815	11	NA	NA	-196	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_7	36.7336273052363	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGCTGTCTGTATTC	NA	False	NA	20	True	AAAAAG	-33	NA	9588714	9614877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_9589044_9595889_9596011_9596858_9597054_9598448_9598626_9601104_9601455_9602068_9602273_9607556_9607790_9611752_9611891_9612985
transcript_22935.nic	chr10	+	1058	10	ISM	ENSG00000107551.21	ENST00000340258.10	3631	11	-92	3931	-92	0	5prime_fragment	FALSE	canonical	3	90	junction_9	4.87118004817399	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAGAGGAAGAAAGAG	44958447	True	NA	NA	False	NA	NA	NA	44959709	44991960	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_44959867_44970164_44970265_44971772_44971849_44982520_44982664_44984021_44984114_44984812_44984971_44989273_44989376_44989669_44989722_44990947_44991070_44991904
transcript_22943.nnic	chr10	+	2396	10	NIC	ENSG00000107551.21	novel	3631	11	NA	NA	-92	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	31.5281571195975	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTGAAGAAGTGAGAACCA	44958447	True	NA	11	True	AATAAA	-15	NA	44959709	44994707	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_44959867_44970164_44970265_44971772_44971849_44984021_44984114_44984812_44984971_44989273_44989376_44989669_44989722_44990947_44991070_44991904_44992003_44993268
transcript_22946.nic	chr10	+	1276	9	ISM	ENSG00000107551.21	ENST00000340258.10	3631	11	-92	4548	-92	0	5prime_fragment	FALSE	canonical	3	92	junction_5	4.26468052730799	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAATGTATTTTGTTGTC	44958447	True	NA	3	True	AGTAAA	-14	NA	44959709	44991343	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_44959867_44970164_44970265_44971772_44971849_44982520_44982664_44984021_44984114_44984812_44984971_44989273_44989376_44989669_44989722_44990947
transcript_2295.known	chr1	+	3851	6	FSM	ENSG00000188807.13	ENST00000340305.9	3851	6	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	11.9733036376766	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGTCAGGTGCCGCGTCT	9587730	False	NA	28	True	AATAAA	-28	NA	9588921	9604954	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_9589044_9595889_9596011_9596858_9597054_9598448_9598626_9601104_9601455_9602068
transcript_22950.known	chr10	+	4350	10	FSM	ENSG00000107551.21	ENST00000489171.5	4350	10	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_9	12.8840987267251	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTGAAGAAGTGAGAACCA	NA	False	NA	11	True	AATAAA	-15	NA	44959406	44994707	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_44959867_44970164_44971849_44982520_44982664_44984021_44984114_44984812_44984971_44989273_44989376_44989669_44989722_44990947_44991070_44991904_44992003_44993268
transcript_22957.known	chr10	-	2120	2	FSM	ENSG00000165507.9	ENST00000298295.4	2120	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCACTGTGTCTCTGTGGT	-44978760	True	NA	NA	False	NA	NA	NA	44978809	44976127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_44978056_44978617
transcript_22958.known	chr10	-	3078	2	FSM	ENSG00000165511.6	ENST00000625168.1	3078	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTGTGAACCGCTCTTG	-45000601	True	NA	0	True	AATAAA	-21	NA	45000888	44997697	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_45000417_45000529
transcript_22960.known	chr10	+	2103	2	FSM	ENSG00000165512.5	ENST00000298299.4	2103	2	0	0	0	0	multi-exon	FALSE	canonical	3	607	junction_1	0	450	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCTTCTGTTTATTTTTC	44992889	True	NA	20	True	AATAAA	-23	NA	45000922	45005326	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_45000979_45003279
transcript_22962.known	chr10	+	2519	14	FSM	ENSG00000012779.12	ENST00000374391.7	2519	14	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	3.41940165706044	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTTGTTCCATGTGTT	NA	False	NA	6	True	AATAAA	-16	NA	45374215	45446117	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_45374430_45382482_45382682_45395854_45395937_45412190_45412314_45424040_45424148_45424959_45425133_45428617_45428765_45440429_45440634_45441343_45441431_45443037_45443217_45443415_45443538_45443727_45443829_45444115_45444287_45445507
transcript_22965.known	chr10	+	2390	13	FSM	ENSG00000012779.12	ENST00000542434.5	2390	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_12	4.10538264558453	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTGTTCCATGTGTTAT	NA	False	NA	8	True	AATAAA	-18	NA	45374175	45446119	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_45374430_45382482_45382682_45395854_45395937_45412190_45412314_45424040_45424148_45424959_45425133_45428617_45428765_45440429_45440634_45441343_45441431_45443037_45443217_45443415_45443538_45443727_45443829_45445507
transcript_22975.nic	chr10	-	5375	8	NIC	ENSG00000165406.16	novel	5272	7	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_7	26.3423303325074	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGCCATGAGAGTGTTT	-45594621	True	NA	-1	True	AATAAA	-19	NA	45594908	45454584	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_45458544_45459119_45459268_45461230_45461412_45464238_45464328_45489366_45489418_45533109_45533290_45553111_45553205_45594234
transcript_22981.known	chr10	-	5272	7	FSM	ENSG00000165406.16	ENST00000319836.7	5272	7	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_6	15.2059929706094	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGAGTTTTGCCATGA	-45594619	True	NA	-9	True	AATAAA	-11	NA	45594906	45454592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_45458544_45459119_45459268_45461230_45461412_45464238_45464328_45489366_45489418_45533109_45533290_45594234
transcript_22984.known	chr10	-	559	2	FSM	ENSG00000165406.16	ENST00000451376.1	559	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAGAGAACTGAGTTCAG	-45593940	True	NA	NA	False	NA	NA	NA	45594598	45593429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_45593625_45594234
transcript_22988.known	chr10	-	3760	10	FSM	ENSG00000172671.20	ENST00000344646.10	3760	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_9	13.4090443035961	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATAACTATCAGTATAA	-45671891	True	NA	87	True	ATTAAA	-23	NA	45672772	45615499	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_45616572_45618139_45618261_45624582_45624638_45625950_45627106_45639815_45639964_45648293_45648535_45651965_45652034_45652983_45653060_45663541_45663843_45672249
transcript_22989.nic	chr10	-	3660	10	NIC	ENSG00000172671.20	novel	3760	10	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_9	12.0922380981447	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATGAATTTCATTATTTA	NA	False	NA	-12	True	AATAAA	-12	NA	45672793	45615598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_45616572_45618139_45618261_45624582_45624638_45625950_45627106_45639815_45639964_45648293_45648535_45651965_45652034_45652983_45653060_45663541_45663843_45672271
transcript_23.known	ERCC-00060	+	506	1	FSM	ERCC-00060A	DQ516763	506	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	279	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00060_+_0_500
transcript_230.known	SIRV6	+	459	5	FSM	SIRV6A	SIRV614	459	5	0	0	0	0	multi-exon	FALSE	canonical	3	3392	junction_3	8671.0982291749	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAAGACTGTATCGGAG	NA	False	NA	NA	False	AAAAAG	-17	NA	2516	10815	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV6_+_2621_2740_2829_3106_3165_7805_7924_10724
transcript_2300.known	chr1	+	5412	24	FSM	ENSG00000171608.17	ENST00000377346.9	5412	24	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	14.9946430257842	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTGAGGACATCCCCTGGG	9651581	True	NA	NA	False	NA	NA	NA	9651730	9729114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_9651803_9691466_9691572_9710423_9710597_9715540_9715770_9715848_9716079_9716439_9716620_9716958_9717109_9717536_9717627_9718693_9718916_9719920_9720018_9720111_9720243_9720610_9720662_9720741_9720910_9721126_9721249_9721443_9721588_9721760_9721861_9721974_9722154_9722243_9722357_9722527_9722607_9723124_9723293_9723968_9724093_9724275_9724422_9724803_9724937_9726908
transcript_23008.nnic	chr10	-	3516	8	NIC	ENSG00000172671.20	novel	3760	10	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_6	18.6076569712359	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATGAATTTCATTATTTA	NA	False	NA	-12	True	AATAAA	-12	NA	45672793	45615598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_45616572_45618139_45618261_45624582_45624638_45625950_45627106_45639815_45639964_45648293_45648535_45663541_45663843_45672271
transcript_2301.nnic	chr1	+	5343	24	NNC	ENSG00000171608.17	novel	539	3	NA	NA	1354	-189	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	13.7614018717019	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTTATGTTCTTTTAT	9689092	True	NA	NA	False	AGTAAA	-23	NA	9689529	9728925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_9689722_9691466_9691572_9710423_9710597_9715540_9715770_9715848_9716079_9716439_9716620_9716958_9717109_9717536_9717627_9718693_9718916_9719920_9720018_9720111_9720243_9720610_9720662_9720741_9720910_9721126_9721249_9721443_9721588_9721760_9721861_9721974_9722154_9722243_9722357_9722527_9722607_9723124_9723293_9723968_9724093_9724275_9724422_9724803_9724937_9726908
transcript_23035.known	chr10	+	4642	31	FSM	ENSG00000172661.20	ENST00000623400.4	4642	31	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_15	53.99474254242	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGTTTACTTACTGT	45724393	True	NA	4	True	AATAAA	-23	NA	45727265	45792964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_45727321_45727416_45727540_45728861_45729027_45737982_45738046_45740072_45740247_45743389_45743484_45744820_45744883_45746599_45746648_45750095_45750207_45750750_45750839_45751481_45751554_45752587_45752707_45753179_45753238_45754485_45754546_45754935_45755116_45757011_45757140_45759314_45759402_45763387_45763490_45765678_45765811_45769448_45769619_45773255_45773359_45777272_45777426_45778952_45779136_45784564_45784694_45784820_45784902_45785508_45785632_45786611_45786675_45787034_45787248_45788870_45789492_45790355_45790534_45792260
transcript_23041.nic	chr10	+	3964	30	ISM	ENSG00000172661.20	ENST00000623400.4	4642	31	-73	2478	-7	-2115	5prime_fragment	FALSE	canonical	3	102	junction_15	54.6508754973589	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCCAAAAAGAAAGTGGAAG	45724320	True	NA	NA	False	AAGAAA	-2	NA	45727192	45790486	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_45727321_45727416_45727540_45728861_45729027_45737982_45738046_45740072_45740247_45743389_45743484_45744820_45744883_45746599_45746648_45750095_45750207_45750750_45750839_45751481_45751554_45752587_45752707_45753179_45753238_45754485_45754546_45754935_45755116_45757011_45757140_45759314_45759402_45763387_45763490_45765678_45765811_45769448_45769619_45773255_45773359_45777272_45777426_45778952_45779136_45784564_45784694_45784820_45784902_45785508_45785632_45786611_45786675_45787034_45787248_45788870_45789492_45790355
transcript_23042.known	chr10	+	4623	30	FSM	ENSG00000172661.20	ENST00000374362.6	4623	30	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_26	61.6836314786185	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCATTTGTTTACTTAC	45724346	True	NA	1	True	AATAAA	-20	NA	45727218	45792961	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_45727321_45727416_45727540_45728861_45729027_45737982_45738046_45740072_45740247_45743389_45743484_45744820_45744883_45746599_45746648_45750095_45750207_45750750_45750839_45751481_45751554_45752587_45752707_45753179_45753238_45754485_45754546_45754935_45755116_45757011_45757140_45759314_45759402_45763387_45763490_45765678_45765811_45769448_45769619_45773255_45773359_45777272_45777426_45778952_45779136_45784564_45784694_45784820_45784902_45785508_45785632_45787034_45787248_45788870_45789492_45790355_45790534_45792260
transcript_23046.nnic	chr10	+	4625	30	NIC	ENSG00000172661.20	novel	4642	31	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_16	59.8051334197421	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCATTTGTTTACTTAC	45724320	True	NA	1	True	AATAAA	-20	NA	45727192	45792961	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_45727321_45727416_45727540_45728861_45729027_45737982_45738046_45740072_45740247_45743389_45743484_45744820_45744883_45746599_45746648_45750095_45750207_45750750_45750839_45751481_45751554_45752587_45752707_45753179_45753238_45754485_45754546_45754935_45755116_45757011_45757140_45763387_45763490_45765678_45765811_45769448_45769619_45773255_45773359_45777272_45777426_45778952_45779136_45784564_45784694_45784820_45784902_45785508_45785632_45786611_45786675_45787034_45787248_45788870_45789492_45790355_45790534_45792260
transcript_23053.nic	chr10	+	3715	29	ISM	ENSG00000172661.20	ENST00000623400.4	4642	31	-73	3591	-7	-3228	5prime_fragment	FALSE	canonical	3	102	junction_15	55.0108523616115	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTCCTCTCCTGGAAG	45724320	True	NA	NA	False	AAGAAA	-6	NA	45727192	45789373	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_45727321_45727416_45727540_45728861_45729027_45737982_45738046_45740072_45740247_45743389_45743484_45744820_45744883_45746599_45746648_45750095_45750207_45750750_45750839_45751481_45751554_45752587_45752707_45753179_45753238_45754485_45754546_45754935_45755116_45757011_45757140_45759314_45759402_45763387_45763490_45765678_45765811_45769448_45769619_45773255_45773359_45777272_45777426_45778952_45779136_45784564_45784694_45784820_45784902_45785508_45785632_45786611_45786675_45787034_45787248_45788870
transcript_23056.known	chr10	+	4327	29	FSM	ENSG00000172661.20	ENST00000540872.6	4327	29	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_25	65.9016254328668	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGATGAGAGATTATACTT	45724362	True	NA	NA	False	NA	NA	NA	45727234	45792804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_45727321_45727416_45727540_45728861_45729027_45737982_45738046_45740072_45740247_45743389_45743484_45744820_45744883_45746599_45746648_45750095_45750207_45750750_45750839_45751481_45751554_45752587_45752707_45753179_45753238_45754485_45754546_45754935_45755116_45757011_45757140_45759314_45759402_45763387_45763490_45765678_45765811_45769448_45769619_45773255_45773359_45777272_45777426_45778952_45779136_45784564_45784694_45784820_45784902_45787034_45787248_45788870_45789492_45790355_45790534_45792260
transcript_23061.nnic	chr10	+	3877	29	NIC	ENSG00000172661.20	novel	4642	31	NA	NA	-7	-2115	combination_of_known_splicesites	FALSE	canonical	3	44	junction_16	60.6082266928933	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCCAAAAAGAAAGTGGAAG	45724320	True	NA	NA	False	AAGAAA	-2	NA	45727192	45790486	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_45727321_45727416_45727540_45728861_45729027_45737982_45738046_45740072_45740247_45743389_45743484_45744820_45744883_45746599_45746648_45750095_45750207_45750750_45750839_45751481_45751554_45752587_45752707_45753179_45753238_45754485_45754546_45754935_45755116_45757011_45757140_45763387_45763490_45765678_45765811_45769448_45769619_45773255_45773359_45777272_45777426_45778952_45779136_45784564_45784694_45784820_45784902_45785508_45785632_45786611_45786675_45787034_45787248_45788870_45789492_45790355
transcript_23092.nic	chr10	+	2266	21	ISM	ENSG00000172661.20	ENST00000540872.6	4327	29	-42	19447	-7	-12606	5prime_fragment	FALSE	canonical	3	102	junction_15	51.9664314726343	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATTCTTCATCTCTTAGT	45724320	True	NA	NA	False	NA	NA	NA	45727192	45773357	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_45727321_45727416_45727540_45728861_45729027_45737982_45738046_45740072_45740247_45743389_45743484_45744820_45744883_45746599_45746648_45750095_45750207_45750750_45750839_45751481_45751554_45752587_45752707_45753179_45753238_45754485_45754546_45754935_45755116_45757011_45757140_45759314_45759402_45763387_45763490_45765678_45765811_45769448_45769619_45773255
transcript_23097.nic	chr10	+	1655	16	ISM	ENSG00000172661.20	ENST00000540872.6	4327	29	-42	35683	-7	5568	5prime_fragment	FALSE	canonical	3	102	junction_15	49.9931550870272	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAAGAGCAGAAAAAAAGGT	45724320	True	NA	NA	False	AATAAA	-1	NA	45727192	45757121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_45727321_45727416_45727540_45728861_45729027_45737982_45738046_45740072_45740247_45743389_45743484_45744820_45744883_45746599_45746648_45750095_45750207_45750750_45750839_45751481_45751554_45752587_45752707_45753179_45753238_45754485_45754546_45754935_45755116_45757011
transcript_231.known	SIRV6	+	377	4	FSM	SIRV6A	SIRV608	377	4	0	0	0	0	multi-exon	FALSE	canonical	3	21619	junction_1	2534.81482996731	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTTATTAGCCTGCCTA	NA	False	NA	NA	False	NA	NA	NA	3023	11270	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV6_+_3165_10724_10819_11031_11109_11205
transcript_23105.known	chr10	+	4669	31	NNC	ENSG00000172661.20	novel	4642	31	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	63.4158147117543	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCATTTGTTTACTTAC	45724363	True	NA	1	True	AATAAA	-20	NA	45727235	45792961	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_45727321_45727416_45727540_45728861_45729027_45737982_45738046_45740072_45740247_45743389_45743484_45744820_45744883_45746599_45746648_45750095_45750207_45750750_45750839_45751481_45751554_45752587_45752707_45753179_45753238_45754485_45754546_45754935_45755114_45757009_45757140_45759314_45759402_45763387_45763490_45765678_45765811_45769448_45769619_45773255_45773359_45777272_45777426_45778952_45779136_45784564_45784694_45784820_45784902_45785508_45785632_45786611_45786675_45787034_45787248_45788870_45789492_45790355_45790534_45792260
transcript_23130.known	chr10	-	2770	8	FSM	ENSG00000188234.15	ENST00000616763.6	2535	8	-263	28	-263	-9	multi-exon	FALSE	canonical	3	49	junction_6	23.7306311998408	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTCATAAATATGCATTGA	NA	False	NA	-36	True	GATAAA	-26	NA	45847763	45825621	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_45827391_45828028_45828081_45831393_45831430_45834015_45834117_45841652_45841688_45844325_45844395_45846686_45846756_45847124
transcript_23138.known	chr10	+	1190	7	FSM	ENSG00000265354.4	ENST00000580018.4	1190	7	0	0	0	0	multi-exon	FALSE	canonical	3	1496	junction_5	155.644894979994	573	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGGTTGTCTCAATTT	45950040	True	NA	48	True	AATAAA	-41	NA	45972488	46003742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_45972731_45975453_45975513_45982522_45982617_45982845_45982931_45985382_45985442_45988736_45988848_46003202
transcript_23145.known	chr10	-	3489	10	FSM	ENSG00000266412.6	ENST00000585132.5	3489	10	0	0	0	0	multi-exon	TRUE	canonical	3	132	junction_9	127.27378867603	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGCGTGTTATTTTTA	-46014827	False	8628	0	True	ATTAAA	-16	NA	46023455	46005087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_46006598_46009410_46009552_46010222_46011207_46012882_46013027_46013549_46013640_46014443_46014553_46014853_46014943_46015125_46015267_46016539_46016695_46023329
transcript_23146.known	chr10	-	3461	10	FSM	ENSG00000266412.6	ENST00000581486.6	3461	10	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_9	44.8778864404065	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGCGTGTTATTTTTA	-46021995	True	NA	0	True	ATTAAA	-16	NA	46030623	46005087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_46006598_46009410_46009552_46010222_46011207_46012882_46013027_46013549_46013640_46014443_46014553_46014853_46014943_46015125_46015267_46016539_46016695_46030525
transcript_23149.nnic	chr10	-	3328	10	NNC	ENSG00000266412.6	novel	3461	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	163.410865951782	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGCGTGTTATTTTTA	-46021995	True	NA	0	True	ATTAAA	-16	NA	46030623	46005087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_46006598_46009410_46009552_46010355_46011207_46012882_46013027_46013549_46013640_46014443_46014553_46014853_46014943_46015125_46015267_46016539_46016695_46030525
transcript_2315.known	chr1	-	4647	18	FSM	ENSG00000171603.18	ENST00000361311.4	4647	18	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_9	156.536960712811	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCAGCCGGAGCGGGGT	-9815496	True	NA	-19	True	AATAAA	-16	NA	9823984	9729027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_9730706_9731205_9731391_9731760_9731897_9733400_9733547_9733971_9734143_9734947_9735175_9735466_9735616_9735884_9736043_9737497_9737555_9741093_9741257_9743883_9744006_9744394_9744644_9749460_9749647_9749763_9749914_9751472_9751682_9755113_9755310_9773271_9773395_9823642
transcript_23152.nic	chr10	-	3328	9	NIC	ENSG00000266412.6	novel	3461	10	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_8	158.030406488751	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGCGTGTTATTTTTA	-46022017	True	NA	0	True	ATTAAA	-16	NA	46030645	46005087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_46006598_46009410_46009552_46010222_46011207_46012882_46013027_46013549_46013640_46014443_46014553_46014853_46014943_46015125_46015267_46030525
transcript_23165.nnic	chr10	-	2927	4	NNC	ENSG00000204175.6	novel	9274	3	NA	NA	-357	-7308	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	17.1334630345285	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCAGAACTCTGCCATGT	-46556605	True	NA	-7	True	NA	NA	NA	46557015	46549043	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_46550743_46554584_46554696_46555374_46555530_46556053
transcript_23166.nnic	chr10	-	2438	4	NNC	ENSG00000204175.6	novel	9279	3	NA	NA	-312	-7308	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	16.6733320005331	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCAGAACTCTGCCATGT	-46556560	True	NA	-7	True	NA	NA	NA	46556970	46549043	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_46550743_46554584_46554696_46555374_46555530_46556497
transcript_23167.nnic	chr10	-	2035	4	NNC	ENSG00000204175.6	novel	9274	3	NA	NA	-344	-7308	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	15.7550697307953	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCAGAACTCTGCCATGT	-46556592	True	NA	-7	True	NA	NA	NA	46557002	46549043	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_46550743_46554584_46554696_46555374_46555530_46556932
transcript_23170.nnic	chr10	-	2152	3	NNC	ENSG00000204175.6	novel	9274	3	NA	NA	263	-7308	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	20.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCAGAACTCTGCCATGT	-46556383	False	NA	-7	True	NA	NA	NA	46556395	46549043	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_46550743_46554584_46554696_46556053
transcript_23171.nnic	chr10	-	2121	3	FSM	ENSG00000204175.6	ENST00000374314.6	9279	3	-150	7308	-150	-7308	multi-exon	FALSE	canonical	3	5	junction_2	19.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCAGAACTCTGCCATGT	-46556796	False	NA	-7	True	NA	NA	NA	46556808	46549043	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_46550743_46554584_46554696_46556497
transcript_23172.known	chr10	-	1966	3	FSM	ENSG00000204175.6	ENST00000374317.2	9274	3	0	7308	0	-7308	multi-exon	FALSE	canonical	3	35	junction_2	4.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCAGAACTCTGCCATGT	-46555518	False	NA	-7	True	NA	NA	NA	46555530	46549043	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_46550743_46554584_46554696_46555374
transcript_23175.nic	chr10	+	1225	4	ISM	ENSG00000204177.11	ENST00000690404.1	2391	6	17	5724	-3	-5724	5prime_fragment	TRUE	canonical	0	0	junction_1	35.2230984819148	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGGCACAGTGGCTCAT	46786277	True	NA	NA	False	NA	NA	NA	46786856	46791748	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_46786901_46788396_46788601_46789496_46789687_46790961
transcript_23177.known	chr10	+	3041	11	FSM	ENSG00000204179.11	ENST00000374339.5	3041	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	4.96386945839634	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCTGAAGTATTTTTATT	46911262	True	NA	NA	False	AATAAA	-15	NA	46911427	47002322	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_46911502_46932376_46932534_46940622_46940718_46943917_46944016_46946562_46946676_46964985_46965138_46967956_46968048_46984229_46984565_46987339_46987556_46999911_46999975_47000675
transcript_23184.known	chr10	+	1929	4	FSM	ENSG00000204179.11	ENST00000374342.6	1929	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6.84754619472471	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCTGAAGTATTTTTATT	46911230	True	NA	NA	False	AATAAA	-15	NA	46911395	47002322	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_46911502_46946562_46946676_46999911_46999975_47000675
transcript_23185.known	chr10	+	2677	3	FSM	ENSG00000266524.3	ENST00000580279.2	2677	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAATGTCACCCATTTCAA	NA	False	NA	NA	False	AATAAA	-28	NA	47300196	47313577	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_47300971_47309795_47310722_47312600
transcript_23187.known	chr10	-	3516	2	FSM	ENSG00000265763.4	ENST00000585316.3	3516	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTGTGAGAAGCTGGG	-47383878	True	NA	-12	True	AATAAA	-15	NA	47384293	47365495	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_47368938_47384219
transcript_232.known	SIRV6001	+	6000	1	FSM	SIRV6001A	SIRV6001	6000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	6000	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV6001_+_0_6000
transcript_23200.nic	chr10	-	1243	4	ISM	ENSG00000254929.6	ENST00000431840.2	1241	9	-24	25243	-24	-25243	5prime_fragment	FALSE	canonical	3	69	junction_3	22.5141930543577	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAGACACAGTGGCTCAT	-47551196	True	NA	NA	False	AAAAAG	-16	NA	47553538	47548600	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_47549385_47550657_47550848_47551743_47551953_47553478
transcript_23204.nnic	chr10	+	2041	7	NNC	ENSG00000189014.7	novel	2712	8	NA	NA	5630	782	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	9.41629792788369	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTTCTTTTACCCTGTG	47695103	True	NA	NA	False	AATAAA	-17	NA	47695336	47731218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_47695614_47696402_47696511_47710220_47710415_47710581_47710717_47719832_47720062_47726840_47726957_47730236
transcript_23210.nic	chr10	+	2631	14	NIC	ENSG00000107643.17	novel	6046	15	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	2	12	junction_13	21.9137632037831	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTAGCTATGAGCCTGTTT	48302208	True	NA	9	True	AATAAA	-16	NA	48306638	48435876	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_48306822_48308094_48308289_48325896_48325966_48401611_48401783_48404851_48404982_48409878_48409938_48410029_48410169_48420154_48420321_48424513_48424586_48425887_48426071_48426379_48426505_48427079_48427144_48431192_48431271_48434878
transcript_23214.nic	chr10	+	2562	13	NIC	ENSG00000107643.17	novel	6046	15	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	12	junction_12	20.8184947155701	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTAGCTATGAGCCTGTTT	48302208	True	NA	9	True	AATAAA	-16	NA	48306638	48435876	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_48306822_48308094_48308289_48401611_48401783_48404851_48404982_48409878_48409938_48410029_48410169_48420154_48420321_48424513_48424586_48425887_48426071_48426379_48426505_48427079_48427144_48431192_48431271_48434878
transcript_23218.known	chr10	+	5796	12	FSM	ENSG00000107643.17	ENST00000374189.6	5809	12	13	0	10	0	multi-exon	FALSE	canonical	1	2	junction_6	27.5420039842978	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGAGTTTTTTCATTGAA	48302259	True	NA	22	True	AATAAA	-31	NA	48306689	48439360	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_48306822_48401611_48401783_48404851_48404982_48409878_48409938_48410029_48410169_48420154_48420321_48424087_48424160_48425887_48426071_48426379_48426505_48427079_48427144_48431192_48431271_48434883
transcript_23220.known	chr10	+	5844	12	FSM	ENSG00000107643.17	ENST00000395611.7	5844	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_11	22.5318874134686	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAAGAGTTTTTTCATT	48302208	True	NA	19	True	AATAAA	-28	NA	48306638	48439357	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_48306822_48401611_48401783_48404851_48404982_48409878_48409938_48410029_48410169_48420154_48420321_48424513_48424586_48425887_48426071_48426379_48426505_48427079_48427144_48431192_48431271_48434883
transcript_23226.known	chr10	+	907	7	FSM	ENSG00000107643.17	ENST00000432379.5	907	7	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_3	22.223611067711	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCTGGAATTATTCATC	48302224	True	NA	NA	False	NA	NA	NA	48306654	48410146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_48306822_48308094_48308289_48325896_48325966_48401611_48401783_48404851_48404982_48409878_48409938_48410029
transcript_23227.known	chr10	-	2352	10	FSM	ENSG00000128805.15	ENST00000417912.6	2352	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	27.1870521106856	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAGTTAGAAGCGTCTG	-48604921	False	NA	NA	False	NA	NA	NA	48604952	48446339	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_48446620_48450260_48451141_48453303_48453426_48454087_48454162_48455001_48455135_48459683_48459892_48479587_48479765_48555462_48555551_48582952_48583153_48604762
transcript_2323.nic	chr1	-	4688	17	NIC	ENSG00000171603.18	novel	4647	18	NA	NA	-98	0	combination_of_known_junctions	FALSE	canonical	3	319	junction_8	94.2594284077195	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCAGCCGGAGCGGGGT	NA	False	NA	-19	True	AATAAA	-16	NA	9824082	9729027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_9730706_9731205_9731391_9731760_9731897_9733400_9733547_9733971_9734143_9734947_9735175_9735466_9735616_9735884_9736043_9741093_9741257_9743883_9744006_9744394_9744644_9749460_9749647_9749763_9749914_9751472_9751682_9755113_9755310_9773271_9773395_9823642
transcript_23231.nic	chr10	-	2561	8	NIC	ENSG00000128805.15	novel	2340	8	NA	NA	-200	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_6	13.9371768288697	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGCCTTGTTACCTGGC	-48524422	False	NA	-13	True	ATTAAA	-15	NA	48524436	48446036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_48446620_48450260_48451141_48453303_48453426_48454087_48454162_48455001_48455135_48459683_48459892_48479587_48479765_48524052
transcript_23232.nic	chr10	-	2513	8	NIC	ENSG00000128805.15	novel	2340	8	NA	NA	-200	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_6	16.4961343647411	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGCCTTGTTACCTGGC	-48524422	False	NA	-13	True	ATTAAA	-15	NA	48524436	48446036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_48446620_48450260_48451141_48453303_48453426_48454087_48454162_48455001_48455135_48459683_48459892_48479635_48479765_48524052
transcript_23238.nnic	chr10	-	2268	7	NIC	ENSG00000128805.15	novel	2340	8	NA	NA	-84	0	combination_of_known_splicesites	FALSE	canonical	2	16	junction_6	17.5372619172879	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGCCTTGTTACCTGGC	-48524306	False	NA	-13	True	ATTAAA	-15	NA	48524320	48446036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_48446620_48450260_48451141_48453303_48453426_48454087_48454162_48455001_48455135_48459683_48459892_48524052
transcript_23245.known	chr10	-	6414	8	FSM	ENSG00000165633.13	ENST00000332853.9	6414	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.77281052085584	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACGAGGAGAAAGCTCATT	-49115458	True	NA	NA	False	ATTAAA	-26	NA	49115522	49014235	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_49019776_49046982_49047045_49048477_49048585_49064702_49064737_49077218_49077327_49085954_49086024_49107593_49107996_49115430
transcript_23248.known	chr10	-	9001	21	FSM	ENSG00000225830.16	ENST00000355832.10	9001	21	0	0	0	0	multi-exon	TRUE	canonical	1	10	junction_14	4.25764019146757	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGGTAAGAACAGTGAGT	-49538294	True	NA	NA	False	AATAAA	-27	NA	49539121	49454469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_49459235_49460372_49460452_49461351_49461557_49470181_49470890_49470974_49471121_49472375_49472471_49472908_49473029_49473476_49473588_49474026_49474243_49476214_49476311_49478353_49478471_49482686_49482864_49483345_49483517_49493116_49493253_49500537_49500697_49505883_49506013_49524032_49524778_49528416_49528526_49530719_49530841_49532542_49532979_49538961
transcript_23252.known	chr10	-	3495	6	FSM	ENSG00000225830.16	ENST00000447839.7	3495	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	3.40587727318528	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTCCTTGAATTTTT	-49538294	True	NA	NA	False	AATAAA	-19	NA	49539121	49515197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_49517122_49524032_49524778_49528416_49528526_49530719_49530841_49532542_49532979_49538961
transcript_23253.known	chr10	+	2411	1	FSM	ENSG00000187714.7	ENST00000374115.5	2411	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGAGTCTCTTTACTGGT	NA	False	NA	NA	False	AATAAA	-18	NA	49610309	49612720	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_49610300_49612700
transcript_23255.known	chr10	-	3706	23	FSM	ENSG00000197444.10	ENST00000374103.9	3706	23	0	0	0	0	multi-exon	TRUE	canonical	3	83	junction_20	18.399436301103	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGTTTTCATTTCATG	-49760637	True	NA	0	True	AATAAA	-18	NA	49762323	49734640	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_49735352_49736022_49736178_49736356_49736521_49737785_49737859_49737946_49738073_49738190_49738263_49739660_49739840_49740709_49740838_49742827_49742979_49743993_49744123_49744649_49744753_49745343_49745497_49745797_49745978_49746749_49746879_49747028_49747209_49749725_49749817_49750838_49750986_49751826_49751982_49752132_49752249_49752637_49752741_49756775_49756947_49758388_49758594_49762238
transcript_23256.nnic	chr10	-	3706	23	NNC	ENSG00000197444.10	novel	3706	23	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_22	28.3489545334655	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTGCTGTTTTCATTTC	NA	False	NA	-3	True	AATAAA	-15	NA	49762420	49734643	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_49735352_49736022_49736178_49736356_49736521_49737785_49737859_49737946_49738073_49738190_49738263_49739660_49739840_49740709_49740838_49742827_49742979_49743993_49744123_49744649_49744753_49745343_49745497_49745797_49745978_49746749_49746879_49747028_49747209_49749725_49749817_49750838_49750986_49751826_49751982_49752132_49752249_49752637_49752741_49756775_49756947_49758388_49758594_49762332
transcript_23263.known	chr10	-	3588	22	FSM	ENSG00000197444.10	ENST00000419399.4	3588	22	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_20	29.4739209834828	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTGCTGTTTTCATTTC	-49760693	False	NA	-3	True	AATAAA	-15	NA	49762379	49734643	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_49735352_49736022_49736178_49736356_49736521_49737785_49737859_49737946_49738073_49738190_49738263_49739660_49739840_49740709_49740838_49742827_49742979_49743993_49744123_49744649_49744753_49745343_49745497_49745797_49745978_49746749_49746879_49747028_49747209_49749725_49749817_49750838_49750986_49751826_49751982_49752132_49752249_49752637_49752741_49758388_49758594_49762238
transcript_23268.nic	chr10	-	3875	22	NIC	ENSG00000197444.10	novel	3706	23	NA	NA	2	0	intron_retention	FALSE	canonical	3	83	junction_19	18.8135619535133	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTGCTGTTTTCATTTC	-49760691	True	NA	-3	True	AATAAA	-15	NA	49762377	49734643	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_49735352_49736022_49736178_49736356_49736521_49737785_49737859_49737946_49738263_49739660_49739840_49740709_49740838_49742827_49742979_49743993_49744123_49744649_49744753_49745343_49745497_49745797_49745978_49746749_49746879_49747028_49747209_49749725_49749817_49750838_49750986_49751826_49751982_49752132_49752249_49752637_49752741_49756775_49756947_49758388_49758594_49762238
transcript_2327.nic	chr1	-	3629	17	NIC	ENSG00000171603.18	novel	4647	18	NA	NA	2	-959	combination_of_known_junctions	FALSE	canonical	3	319	junction_8	94.2594284077195	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTTTGTGCTAGTGTAA	-9815494	True	NA	-20	True	AATAAA	-13	NA	9823982	9729986	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_9730706_9731205_9731391_9731760_9731897_9733400_9733547_9733971_9734143_9734947_9735175_9735466_9735616_9735884_9736043_9741093_9741257_9743883_9744006_9744394_9744644_9749460_9749647_9749763_9749914_9751472_9751682_9755113_9755310_9773271_9773395_9823642
transcript_23271.known	chr10	-	3383	21	FSM	ENSG00000197444.10	ENST00000432695.2	3383	21	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_20	29.7537812723022	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTGCTGTTTTCATTTC	-49760693	False	NA	-3	True	AATAAA	-15	NA	49762379	49734643	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_49735352_49736022_49736178_49736356_49736521_49737785_49737859_49737946_49738073_49738190_49738263_49739660_49739840_49740709_49740838_49742827_49742979_49743993_49744123_49744649_49744753_49745343_49745497_49745797_49745978_49746749_49746879_49747028_49747209_49749725_49749817_49750838_49750986_49751826_49751982_49752132_49752249_49752637_49752741_49762238
transcript_233.known	SIRV6002	+	6000	1	FSM	SIRV6002A	SIRV6002	6000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	6000	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV6002_+_0_6000
transcript_2330.nnic	chr1	-	3397	16	NNC	ENSG00000171603.18	novel	4760	19	NA	NA	0	-959	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_14	152.261558583321	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTTTGTGCTAGTGTAA	-9815477	True	NA	-20	True	AATAAA	-13	NA	9823965	9729986	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_9730706_9731205_9731391_9731760_9731897_9733400_9733547_9733971_9734143_9734947_9735175_9735466_9735616_9735884_9736043_9741093_9741257_9743883_9744006_9744394_9744644_9749460_9749647_9749763_9749914_9751472_9751663_9773271_9773395_9823642
transcript_23300.nnic	chr10	-	4082	19	NNC	ENSG00000227345.9	novel	4128	19	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	85.8266987727142	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGTTTAGGCATTATTTG	-49936893	True	NA	-12	True	AATAAA	-21	NA	49942026	49818278	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_49819067_49819277_49819495_49820164_49820294_49832802_49832909_49841949_49842059_49843553_49843633_49857305_49857454_49861587_49861664_49865320_49865382_49869475_49869556_49879672_49879831_49885202_49885296_49915916_49915992_49922335_49922420_49922546_49922670_49932099_49932284_49933176_49934164_49935075_49935143_49941508
transcript_23307.known	chr10	-	4294	18	FSM	ENSG00000227345.9	ENST00000616448.2	4294	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	72.6856530014633	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGTTTAGGCATTATTTG	-49936894	True	NA	-12	True	AATAAA	-21	NA	49942027	49818278	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_49819495_49820164_49820294_49832802_49832909_49841949_49842059_49843553_49843633_49857305_49857454_49861587_49861664_49865320_49865382_49869475_49869556_49879672_49879831_49885202_49885296_49915916_49915992_49922335_49922420_49922546_49922670_49932099_49932284_49933176_49934164_49935075_49935143_49941508
transcript_23317.known	chr10	-	3473	17	FSM	ENSG00000227345.9	ENST00000614063.4	3473	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	88.1404241820971	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTCTGCAGCCCGCAGA	-49936853	True	NA	NA	False	NA	NA	NA	49941986	49818991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_49819495_49820164_49820294_49832802_49832909_49841949_49842059_49843553_49843633_49857305_49857454_49861587_49861664_49865320_49865382_49869475_49869556_49879672_49879831_49885202_49885296_49915916_49915992_49922335_49922420_49922546_49922670_49932099_49932284_49933176_49934164_49941508
transcript_23357.nnic	chr10	+	3224	16	NIC	ENSG00000178440.8	novel	3593	18	NA	NA	-33	21	combination_of_known_splicesites	FALSE	canonical	3	11	junction_8	32.3601950275678	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTGTACACATGGCAC	NA	False	NA	12	True	AATAAA	-18	NA	49942022	50010497	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_49942301_49945031_49945091_49952125_49952220_49952448_49952534_49955001_49955061_49958369_49958481_49973011_49973143_49987164_49987235_49988750_49988939_49989307_49989377_49991675_49991745_49994394_49994430_50001995_50002097_50004684_50004721_50008024_50008077_50008710
transcript_23394.nnic	chr10	+	2966	14	NIC	ENSG00000178440.8	novel	3593	18	NA	NA	-33	21	combination_of_known_splicesites	FALSE	canonical	2	11	junction_7	28.1393405254477	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTGTACACATGGCAC	NA	False	NA	12	True	AATAAA	-18	NA	49942022	50010497	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_49942301_49945031_49945091_49952125_49952220_49952448_49952534_49955001_49955061_49958369_49958481_49973011_49973143_49989307_49989377_49991675_49991745_49994394_49994430_50001995_50002097_50004684_50004721_50008024_50008077_50008710
transcript_234.known	SIRV6003	+	6000	1	FSM	SIRV6003A	SIRV6003	6000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	6000	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV6003_+_0_6000
transcript_2341.nic	chr1	-	862	4	ISM	ENSG00000171603.18	ENST00000361311.4	4647	18	10	22443	-9	-1983	5prime_fragment	FALSE	canonical	3	434	junction_2	15.5777619273972	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATCGAGGAGCCGGCTT	-9815486	True	NA	-2	True	NA	NA	NA	9823974	9751470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_9751682_9755113_9755310_9773271_9773395_9823642
transcript_23411.known	chr10	+	2623	8	FSM	ENSG00000204152.14	ENST00000478381.5	2623	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	39.311420161348	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTCTATGTTGGTTAAT	49938120	True	NA	NA	False	ATTAAA	-19	NA	49942048	49974850	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_49942301_49943234_49943359_49945031_49945091_49952125_49952220_49952448_49952534_49955001_49955061_49958369_49958481_49973011
transcript_23414.known	chr10	+	2495	7	FSM	ENSG00000204152.14	ENST00000651259.3	2495	7	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	17.8831081066898	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTCTATGTTGGTTAAT	49938124	True	NA	NA	False	ATTAAA	-19	NA	49942052	49974850	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_49942301_49945031_49945091_49952125_49952220_49952448_49952534_49955001_49955061_49958369_49958481_49973011
transcript_2342.nic	chr1	-	536	2	ISM	ENSG00000231789.3	ENST00000415330.3	978	3	0	8434	0	-8434	5prime_fragment	FALSE	canonical	3	77	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGGCGTGATTTGTTAA	-9686037	True	NA	2	True	CATAAA	-23	NA	9687573	9680838	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_9681136_9687334
transcript_23428.known	chr10	+	4642	31	FSM	ENSG00000099290.17	ENST00000282633.10	4642	31	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	45.6627735566828	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGTTTACTTACTGT	50065570	True	NA	10	True	AATAAA	-23	NA	50067953	50133509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_50068009_50068104_50068228_50069546_50069712_50078674_50078738_50080757_50080932_50084071_50084166_50085496_50085559_50087274_50087323_50090775_50090887_50091430_50091519_50092161_50092234_50093267_50093387_50093859_50093918_50095147_50095208_50095598_50095779_50097674_50097803_50099977_50100065_50104041_50104144_50106333_50106466_50110100_50110271_50113894_50113998_50117905_50118059_50119586_50119770_50125112_50125242_50125368_50125450_50126056_50126180_50127159_50127223_50127582_50127796_50129418_50130040_50130900_50131079_50132805
transcript_2343.known	chr1	-	939	3	FSM	ENSG00000231789.3	ENST00000415330.3	978	3	18	21	18	-21	multi-exon	FALSE	canonical	3	7	junction_1	35	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGGCATTTCTCATCCTA	-9686019	True	NA	-19	True	AATAAA	-12	NA	9687555	9672425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_9672720_9680711_9681136_9687334
transcript_23432.nic	chr10	+	3964	30	ISM	ENSG00000099290.17	ENST00000282633.10	4642	31	-73	2478	-7	-2318	5prime_fragment	FALSE	canonical	3	132	junction_1	46.43502614185	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCCAAAAAGAAAGTGGAAG	NA	False	NA	NA	False	AAGAAA	-2	NA	50067880	50131031	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_50068009_50068104_50068228_50069546_50069712_50078674_50078738_50080757_50080932_50084071_50084166_50085496_50085559_50087274_50087323_50090775_50090887_50091430_50091519_50092161_50092234_50093267_50093387_50093859_50093918_50095147_50095208_50095598_50095779_50097674_50097803_50099977_50100065_50104041_50104144_50106333_50106466_50110100_50110271_50113894_50113998_50117905_50118059_50119586_50119770_50125112_50125242_50125368_50125450_50126056_50126180_50127159_50127223_50127582_50127796_50129418_50130040_50130900
transcript_23433.known	chr10	+	4623	30	FSM	ENSG00000099290.17	ENST00000351071.11	4623	30	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_26	56.1256446777007	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCATTTGTTTACTTAC	50065523	True	NA	7	True	AATAAA	-20	NA	50067906	50133506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_50068009_50068104_50068228_50069546_50069712_50078674_50078738_50080757_50080932_50084071_50084166_50085496_50085559_50087274_50087323_50090775_50090887_50091430_50091519_50092161_50092234_50093267_50093387_50093859_50093918_50095147_50095208_50095598_50095779_50097674_50097803_50099977_50100065_50104041_50104144_50106333_50106466_50110100_50110271_50113894_50113998_50117905_50118059_50119586_50119770_50125112_50125242_50125368_50125450_50126056_50126180_50127582_50127796_50129418_50130040_50130900_50131079_50132805
transcript_23437.nnic	chr10	+	4263	30	NIC	ENSG00000099290.17	novel	4642	31	NA	NA	-7	-205	combination_of_known_splicesites	FALSE	canonical	3	34	junction_16	55.0886433004994	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTGGTTTGTTTTGTTTT	NA	False	NA	7	True	AATAAA	-11	NA	50067880	50133144	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_50068009_50068104_50068228_50069546_50069712_50078674_50078738_50080757_50080932_50084071_50084166_50085496_50085559_50087274_50087323_50090775_50090887_50091430_50091519_50092161_50092234_50093267_50093387_50093859_50093918_50095147_50095208_50095598_50095779_50097674_50097803_50104041_50104144_50106333_50106466_50110100_50110271_50113894_50113998_50117905_50118059_50119586_50119770_50125112_50125242_50125368_50125450_50126056_50126180_50127159_50127223_50127582_50127796_50129418_50130040_50130900_50131079_50132805
transcript_23438.nnic	chr10	+	4625	30	NIC	ENSG00000099290.17	novel	4642	31	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	3	34	junction_16	55.0886433004994	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCATTTGTTTACTTAC	NA	False	NA	7	True	AATAAA	-20	NA	50067880	50133506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_50068009_50068104_50068228_50069546_50069712_50078674_50078738_50080757_50080932_50084071_50084166_50085496_50085559_50087274_50087323_50090775_50090887_50091430_50091519_50092161_50092234_50093267_50093387_50093859_50093918_50095147_50095208_50095598_50095779_50097674_50097803_50104041_50104144_50106333_50106466_50110100_50110271_50113894_50113998_50117905_50118059_50119586_50119770_50125112_50125242_50125368_50125450_50126056_50126180_50127159_50127223_50127582_50127796_50129418_50130040_50130900_50131079_50132805
transcript_23446.nnic	chr10	+	3814	29	NIC	ENSG00000099290.17	novel	4642	31	NA	NA	-10	-2318	combination_of_known_splicesites	FALSE	canonical	3	34	junction_16	56.0607701425836	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCCAAAAAGAAAGTGGAAG	50065560	True	NA	NA	False	AAGAAA	-2	NA	50067943	50131031	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_50068009_50068104_50068228_50069546_50069712_50078674_50078738_50080757_50080932_50084071_50084166_50085496_50085559_50087274_50087323_50090775_50090887_50091430_50091519_50092161_50092234_50093267_50093387_50093859_50093918_50095147_50095208_50095598_50095779_50097674_50097803_50104041_50104144_50106333_50106466_50110100_50110271_50113894_50113998_50117905_50118059_50119586_50119770_50125112_50125242_50125368_50125450_50126056_50126180_50127159_50127223_50127582_50127796_50129418_50130040_50130900
transcript_23467.nic	chr10	+	2266	21	ISM	ENSG00000099290.17	ENST00000314664.12	4327	29	-42	19353	-7	-12512	5prime_fragment	FALSE	canonical	3	132	junction_1	45.8164544678001	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATTCTTCATCTCTTAGT	NA	False	NA	NA	False	NA	NA	NA	50067880	50113996	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_50068009_50068104_50068228_50069546_50069712_50078674_50078738_50080757_50080932_50084071_50084166_50085496_50085559_50087274_50087323_50090775_50090887_50091430_50091519_50092161_50092234_50093267_50093387_50093859_50093918_50095147_50095208_50095598_50095779_50097674_50097803_50099977_50100065_50104041_50104144_50106333_50106466_50110100_50110271_50113894
transcript_23469.known	chr10	+	4417	28	FSM	ENSG00000099290.17	ENST00000611324.4	4417	28	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_10	75.4607248020738	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCATTTGTTTACTTAC	50065504	True	NA	7	True	AATAAA	-20	NA	50067887	50133506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_50068009_50068104_50068228_50069546_50069712_50078674_50078738_50080757_50080932_50084071_50084166_50085496_50085559_50087274_50087323_50090775_50090887_50091430_50091519_50093267_50093387_50093859_50093918_50095147_50095208_50095598_50095779_50097674_50097803_50099977_50100065_50104041_50104144_50106333_50106466_50110100_50110271_50113894_50113998_50119586_50119770_50125112_50125242_50125368_50125450_50126056_50126180_50127582_50127796_50129418_50130040_50130900_50131079_50132805
transcript_23475.nic	chr10	+	1655	16	ISM	ENSG00000099290.17	ENST00000314664.12	4327	29	-42	35565	-7	6279	5prime_fragment	FALSE	canonical	3	132	junction_1	42.1642291785611	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAAGAGCAGAAAAAAAGGT	NA	False	NA	NA	False	AATAAA	-1	NA	50067880	50097784	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_50068009_50068104_50068228_50069546_50069712_50078674_50078738_50080757_50080932_50084071_50084166_50085496_50085559_50087274_50087323_50090775_50090887_50091430_50091519_50092161_50092234_50093267_50093387_50093859_50093918_50095147_50095208_50095598_50095779_50097674
transcript_2348.known	chr1	-	3006	6	FSM	ENSG00000178585.15	ENST00000377263.6	3006	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_5	200.742621284071	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGTGAGCTGAGCTGGT	-9905751	True	NA	-8	True	AATAAA	-16	NA	9910269	9848275	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_9850777_9871186_9871278_9871968_9872089_9877904_9877990_9883704_9883739_9910094
transcript_23485.known	chr10	-	3717	11	FSM	ENSG00000198964.14	ENST00000361781.7	3717	11	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	14.2632394637403	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTTATTTCTACTGTG	-50621222	True	NA	NA	False	AATAAA	-20	NA	50623956	50305599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_50307322_50307981_50308149_50311261_50311416_50327204_50327323_50343491_50344346_50433475_50433557_50460672_50460815_50466889_50466933_50519830_50519922_50590152_50590248_50623706
transcript_23492.nic	chr10	-	1058	3	ISM	ENSG00000198964.14	ENST00000619438.4	1680	8	-601	178499	408	-59158	5prime_fragment	FALSE	canonical	3	102	junction_2	12	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTCAGAATCAGCATTT	-50624561	False	NA	NA	False	AATAAA	-7	NA	50624578	50519830	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_50519922_50590152_50590248_50623706
transcript_23493.known	chr10	+	5199	7	FSM	ENSG00000204147.11	ENST00000643505.1	5199	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	65.9772688128267	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTATAACCAAAAACTTAC	50739226	True	NA	NA	False	AATAAA	-8	NA	50739935	50759240	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_50739984_50742914_50743011_50743672_50743742_50745127_50745275_50749342_50749403_50752467_50752557_50754550
transcript_23498.known	chr10	+	5145	6	FSM	ENSG00000204147.11	ENST00000647317.2	5145	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	43.9108187124768	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACCTCGACTCCCAGTTT	50739226	True	NA	NA	False	AATAAA	-23	NA	50739935	50759255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_50739984_50742914_50743011_50745127_50745275_50749342_50749403_50752467_50752557_50754550
transcript_235.known	SIRV7	-	889	6	FSM	SIRV7A	SIRV708	889	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1868.58798026745	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCCTAAGAGATCGAC	NA	False	NA	NA	False	NA	NA	NA	147957	56037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV7_-_56098_70883_70988_78841_78909_78928_78964_114686_114961_147608
transcript_23502.known	chr10	+	632	6	FSM	ENSG00000204147.11	ENST00000374006.1	632	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	53.4280825034925	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAACTAGTGAACTACCA	50739238	True	NA	NA	False	AATGAA	-1	NA	50739947	50754809	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_50740003_50742914_50743011_50745201_50745275_50749342_50749403_50752467_50752557_50754550
transcript_23506.nic	chr10	+	2692	15	ISM	ENSG00000185532.20	ENST00000373980.11	6615	18	730093	3232	-242168	942	3prime_fragment	FALSE	canonical	0	0	junction_2	8.36416066760254	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAGAAATAAAAGAAGTAGAA	NA	False	NA	NA	False	AATGAA	-4	NA	51804579	52295118	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_51804691_51907506_51907571_52054483_52054562_52062536_52062632_52133839_52133906_52161888_52161964_52251569_52251667_52271349_52271490_52272391_52272482_52280788_52280931_52282152_52282317_52288725_52288849_52288930_52288994_52290223_52290291_52293801
transcript_23511.nnic	chr10	+	3022	14	NNC	ENSG00000185532.20	novel	6957	18	NA	NA	-10140	942	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_12	6.41466515058135	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAGAAATAAAAGAAGTAGAA	52036582	True	NA	NA	False	AATGAA	-4	NA	52036607	52295118	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_52037113_52054483_52054562_52062536_52062632_52133839_52133906_52161888_52161964_52251569_52251667_52271349_52271490_52272391_52272482_52280788_52280931_52282152_52282317_52288725_52288849_52288930_52288994_52290223_52290291_52293801
transcript_23516.known	chr10	-	4110	1	FSM	ENSG00000177613.9	ENST00000331173.6	4110	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAGTATCTGATATGTTT	-51694190	True	NA	-4	True	AATAAA	-18	NA	51699595	51695485	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_51695500_51699600
transcript_23520.known	chr10	-	807	9	FSM	ENSG00000122952.17	ENST00000361148.6	807	9	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_3	241.670973381165	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGAACTCCTGAGTTCAG	-56347017	True	NA	-86	True	NA	NA	NA	56361266	56358142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_56358186_56358376_56358460_56358555_56358688_56358908_56358948_56359475_56359533_56359686_56359854_56360017_56360142_56360292_56360384_56361195
transcript_23521.known	chr10	-	1857	9	FSM	ENSG00000122952.17	ENST00000373944.8	1857	9	0	0	0	0	multi-exon	TRUE	canonical	3	666	junction_3	104.519062256605	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGATGTCATCTTTTTTA	-56347010	True	NA	15	True	AATAAA	-42	NA	56361259	56357226	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_56358186_56358376_56358460_56358555_56358725_56358804_56358948_56359475_56359533_56359686_56359854_56360017_56360142_56360292_56360384_56361195
transcript_23527.nnic	chr10	-	1655	9	NNC	ENSG00000122952.17	novel	1857	9	NA	NA	-42	-3	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_1	288.207363498922	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATACATTTCTTCTGACTT	-56347066	True	NA	-16	True	AATAAA	-10	NA	56361315	56357447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_56358149_56358376_56358460_56358555_56358725_56358804_56358948_56359475_56359533_56359686_56359854_56360017_56360142_56360292_56360384_56361195
transcript_23536.known	chr10	-	1851	8	FSM	ENSG00000122952.17	ENST00000395405.5	1851	8	0	0	0	0	multi-exon	FALSE	canonical	3	666	junction_2	111.725976735722	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGACTTCCTTTATTTT	-56347024	True	NA	-6	True	AATAAA	-20	NA	56361273	56357437	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_56358460_56358555_56358725_56358804_56358948_56359475_56359533_56359686_56359854_56360017_56360142_56360292_56360384_56361195
transcript_23550.known	chr10	-	1961	7	FSM	ENSG00000122952.17	ENST00000494312.5	1961	7	0	0	0	0	multi-exon	FALSE	canonical	3	666	junction_3	115.060370627288	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGACTTCCTTTATTTT	-56347010	True	NA	-6	True	AATAAA	-20	NA	56361259	56357437	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_56358186_56358376_56358460_56358555_56358725_56358804_56358948_56359475_56359533_56359686_56360384_56361195
transcript_23563.known	chr10	+	1068	2	FSM	ENSG00000287016.1	ENST00000655098.1	1068	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATAGTTTCTCTGAAGT	56361239	True	NA	5	True	AATAAA	-16	NA	56361478	56364714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_56361857_56364024
transcript_23567.known	chr10	-	6093	6	FSM	ENSG00000151151.6	ENST00000373935.4	6093	6	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_5	10.5527247666183	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTCATTAATTGTAAC	-58265880	True	NA	-11	True	ATTAAA	-17	NA	58267894	58191516	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_58196699_58199239_58199322_58216144_58216318_58227042_58227140_58237728_58237815_58267421
transcript_23571.nic	chr10	-	966	5	ISM	ENSG00000151151.6	ENST00000373935.4	6093	6	-67	7735	-67	-7735	5prime_fragment	FALSE	canonical	3	80	junction_4	10.7238052947636	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATAAAGGATGGTAAGGAC	-58265947	True	NA	NA	False	AAGAAA	-1	NA	58267961	58199251	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_58199322_58216144_58216318_58227042_58227140_58237728_58237815_58267421
transcript_23573.known	chr10	+	2375	3	FSM	ENSG00000122873.12	ENST00000333926.6	2375	3	0	0	0	0	multi-exon	FALSE	canonical	3	934	junction_2	21.5	270	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGTGGTTAGGTTAAT	58261439	True	NA	NA	False	ATTAAA	-34	NA	58269161	58289586	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_58269305_58277116_58277323_58287560
transcript_23576.known	chr10	+	2623	7	FSM	ENSG00000072401.15	ENST00000373910.9	2623	7	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_5	25.6883025692413	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAACTTGTTTGCCTTTGC	58326390	True	NA	10	True	ATTAAA	-15	NA	58335005	58370748	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_58335226_58361337_58361402_58361494_58361527_58363608_58363687_58364770_58364877_58367922_58368017_58368719
transcript_23579.known	chr10	+	2621	6	FSM	ENSG00000072401.15	ENST00000615793.1	2621	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	167.39605730124	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTTTGCCTTTGCTTA	58326363	True	NA	13	True	ATTAAA	-18	NA	58334978	58370751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_58335226_58361337_58361402_58363608_58363687_58364770_58364877_58367922_58368017_58368719
transcript_23582.known	chr10	+	5025	7	FSM	ENSG00000108064.11	ENST00000487519.6	5025	7	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_4	58.4534477644865	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCATTTATATATTGGTT	58372925	True	NA	21	True	AATAAA	-23	NA	58385409	58399220	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_58385649_58386219_58386339_58388189_58388261_58388669_58388820_58390764_58390861_58394357_58394415_58394927
transcript_23585.known	chr10	+	973	6	FSM	ENSG00000108064.11	ENST00000373895.7	973	6	0	0	0	0	multi-exon	FALSE	canonical	2	43	junction_4	170.868370390778	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGAGGATCAGAGTAATC	58372949	True	NA	NA	False	GATAAA	-34	NA	58385433	58395288	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_58385649_58386219_58386339_58388189_58388261_58388669_58388820_58394357_58394415_58394927
transcript_23589.nic	chr10	+	565	4	ISM	ENSG00000108064.11	ENST00000395377.2	663	6	-203	5743	-9	-5743	5prime_fragment	FALSE	canonical	3	419	junction_2	33.3099918276117	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAGCTATGACAAAAAAA	58372916	True	NA	14	True	AAAAAG	-25	NA	58385400	58388796	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_58385649_58386219_58386339_58388189_58388261_58388669
transcript_23590.nic	chr10	+	825	3	ISM	ENSG00000108064.11	ENST00000395377.2	663	6	-590	6279	-331	-6279	5prime_fragment	FALSE	canonical	3	419	junction_2	40.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGCACATAAGTTTTCAA	NA	False	NA	NA	False	AAGAAA	-4	NA	58385013	58388260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_58385649_58386219_58386339_58388189
transcript_23592.known	chr10	+	5741	21	FSM	ENSG00000122870.12	ENST00000373886.8	5741	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.58949130612758	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAAGCGTGTCTTTTTTT	58512656	True	NA	NA	False	AATAAA	-32	NA	58512871	58831435	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_58513334_58620854_58620902_58702073_58702144_58785000_58785081_58786922_58787082_58788369_58788424_58789261_58789457_58789681_58789934_58793483_58793616_58796339_58796527_58798398_58798561_58799055_58799253_58800193_58800327_58800889_58801047_58803076_58803243_58806583_58806624_58807003_58807159_58813829_58813987_58817561_58817723_58820368_58820469_58828760
transcript_23595.known	chr10	-	3328	14	FSM	ENSG00000148541.13	ENST00000618804.5	3328	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	3.19948220662853	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTATGTTGAAACACAG	-59362423	True	NA	NA	False	AATAAA	-17	NA	59362549	59246132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_59247738_59251574_59251677_59252798_59252999_59254347_59254444_59262433_59262646_59264084_59264167_59268552_59268692_59269898_59270110_59283362_59283448_59302800_59302865_59323987_59324107_59352269_59352475_59355886_59355944_59362398
transcript_23597.known	chr10	-	3946	6	FSM	ENSG00000165449.12	ENST00000395348.8	3946	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	6.43117407632541	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTTTGGTTGCTTTTTCT	-59709147	True	NA	-5	True	AATAAA	-21	NA	59709850	59650763	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_59652951_59653674_59654590_59664226_59664323_59672769_59672914_59684095_59684328_59709478
transcript_23606.known	chr10	-	5727	9	FSM	ENSG00000108091.11	ENST00000263102.7	5727	9	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_4	16.3382220574945	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTATCTTTTTTCATTTCG	-59900665	True	NA	4	True	AATAAA	-36	NA	59906556	59788746	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_59793112_59794472_59794598_59804419_59804521_59806921_59807079_59812634_59812796_59814651_59814756_59832524_59832654_59852552_59852703_59906121
transcript_23613.nic	chr10	-	1147	3	ISM	ENSG00000108091.11	ENST00000263102.7	5727	9	-475	43820	-475	-26123	5prime_fragment	FALSE	canonical	3	204	junction_1	2.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAGAATGACACCATTTC	-59906917	True	NA	NA	False	ATTAAA	-4	NA	59907031	59832566	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_59832654_59852552_59852703_59906121
transcript_23618.known	chr10	-	7202	44	FSM	ENSG00000151150.22	ENST00000373827.6	7202	44	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_20	34.0692673985052	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCTCTACAGTCTCCT	-60731008	True	NA	-2	True	AATAAA	-22	NA	60733490	60028400	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_60029827_60042671_60042760_60055657_60056037_60059339_60059431_60059697_60060007_60063110_60063255_60064156_60064289_60067934_60068010_60080536_60080619_60082614_60082738_60083491_60083618_60084601_60084831_60085156_60085254_60086676_60086885_60088146_60088359_60105904_60106060_60108829_60109055_60114224_60114332_60134270_60134374_60138963_60139088_60166590_60166654_60166823_60166897_60172307_60172404_60172899_60172999_60173087_60173187_60181328_60181428_60186714_60186913_60196144_60196244_60196526_60196626_60198339_60198538_60200128_60200228_60203001_60203101_60205791_60205891_60208035_60208234_60213411_60213511_60234687_60234787_60261858_60261958_60263834_60264021_60270130_60270230_60278773_60278873_60279049_60279149_60279537_60279640_60615185_60615225_60733262
transcript_23626.nic	chr10	-	3175	28	NIC	ENSG00000151150.22	novel	5071	33	NA	NA	20841	79	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	26.7517162250883	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGATTTAACCGAGTTAC	NA	False	NA	NA	False	NA	NA	NA	60279641	60105942	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_60106060_60108829_60109055_60114224_60114332_60134270_60134359_60137341_60137354_60138963_60139088_60166590_60166654_60166823_60166897_60172307_60172404_60172899_60172999_60173087_60173187_60181328_60181428_60186714_60186913_60196144_60196244_60196526_60196626_60198339_60198538_60200128_60200228_60203001_60203101_60205791_60205891_60208035_60208234_60213411_60213511_60234687_60234787_60261858_60261958_60263834_60264021_60270130_60270230_60278773_60278873_60279049_60279149_60279537
transcript_23630.known	chr10	-	3811	21	FSM	ENSG00000151150.22	ENST00000355288.6	3811	21	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_20	21.2800375939518	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAAACCACCCACAT	-60141005	False	NA	14	True	AAAAAG	-5	NA	60141016	60029689	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_60029827_60042671_60042760_60055657_60056037_60059339_60059431_60059697_60060007_60063110_60063255_60064156_60064289_60067934_60068010_60080536_60080619_60082614_60082738_60083491_60083618_60084601_60084831_60085156_60085254_60086676_60086885_60088146_60088359_60105904_60106060_60108829_60109055_60114224_60114332_60134270_60134374_60138963_60139088_60140351
transcript_2364.known	chr1	-	1206	5	FSM	ENSG00000178585.15	ENST00000400904.7	1206	5	0	0	0	0	multi-exon	FALSE	canonical	3	433	junction_4	22.6550215184184	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGGGGTTTGTGTTTGA	-9905818	True	NA	-19	True	NA	NA	NA	9910336	9850108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_9850777_9871186_9871278_9871968_9872089_9877904_9877990_9910094
transcript_23655.known	chr10	+	1889	8	FSM	ENSG00000170312.17	ENST00000395284.8	1889	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	479.76775844237	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCTCATTGTGATTCTT	60763042	True	NA	NA	False	ATTAAA	-16	NA	60778477	60794852	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_60778571_60780140_60780203_60784704_60784862_60785663_60785788_60788059_60788231_60791889_60792054_60792147_60792290_60793876
transcript_23662.known	chr10	+	1948	8	FSM	ENSG00000170312.17	ENST00000448257.6	1948	8	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	428.650659342899	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATTAAACTGTTTAACAA	60763057	True	NA	NA	False	AAAAAG	-37	NA	60778492	60794828	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_60778669_60780140_60780203_60784704_60784862_60785663_60785788_60788059_60788235_60791893_60792054_60792147_60792290_60793876
transcript_23664.known	chr10	+	1733	7	FSM	ENSG00000170312.17	ENST00000316629.8	1733	7	0	0	0	0	multi-exon	TRUE	canonical	3	147	junction_4	458.13498738545	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATAATGCTGCTCATT	60763018	True	NA	NA	False	ATTAAA	-7	NA	60778453	60794843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_60778571_60780140_60780203_60784704_60784862_60785663_60785788_60791889_60792054_60792147_60792290_60793876
transcript_2367.nnic	chr1	-	2991	4	NIC	ENSG00000178585.15	novel	3006	6	NA	NA	-37	0	intron_retention	FALSE	canonical	3	40	junction_3	204.708464787257	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGTGAGCTGAGCTGGT	-9905855	True	NA	-8	True	AATAAA	-16	NA	9910373	9848275	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_9850777_9871186_9871278_9871968_9872089_9910094
transcript_23670.known	chr10	-	4411	11	FSM	ENSG00000072422.17	ENST00000337910.10	4411	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_7	5.44426303552648	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTCCAGTTTTGTTTTAA	-60943717	True	NA	NA	False	AATAAA	-18	NA	60944185	60869437	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_60871652_60872184_60872291_60874953_60875043_60877907_60878059_60886111_60886231_60888211_60889186_60892809_60892996_60910886_60910991_60911350_60911553_60941803_60941855_60943970
transcript_23676.known	chr10	-	5087	6	FSM	ENSG00000196932.12	ENST00000399298.8	5087	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	3.49857113690718	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAATGTGGATTTTTGCT	-61453365	False	NA	-4	True	ATTAAA	-20	NA	61453381	61406641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_61410747_61413458_61413536_61428925_61429147_61431218_61431333_61436169_61436249_61452890
transcript_23680.known	chr10	-	6886	12	FSM	ENSG00000182010.11	ENST00000373789.8	6886	12	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_3	60.3908755627841	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTTGTAGCAATTTTATA	-62268832	True	NA	2	True	AATAAA	-13	NA	62268844	62193085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_62198444_62199753_62199862_62204856_62205023_62217117_62217250_62218194_62218302_62223237_62223333_62236065_62236264_62239647_62239766_62241141_62241196_62245998_62246058_62262624_62262822_62268550
transcript_23685.known	chr10	-	2076	5	FSM	ENSG00000182010.11	ENST00000395260.3	2076	5	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_2	32.4114177412837	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGAAGTTATTCCTGGGA	-62264807	True	NA	NA	False	AATAAA	-12	NA	62268707	62238156	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_62239766_62241141_62241196_62245998_62246058_62262624_62262822_62268550
transcript_23687.known	chr10	+	3988	5	FSM	ENSG00000138311.18	ENST00000395254.8	3988	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGATATGTTTTGTCT	62374335	True	NA	NA	False	AATAAA	-18	NA	62374368	62402450	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_62374459_62376180_62376937_62388395_62388577_62398739_62398778_62399527
transcript_23688.known	chr10	+	3760	1	FSM	ENSG00000181915.5	ENST00000373783.3	3760	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTGTCTGTCTAAATGC	62800400	True	NA	14	True	AATAAA	-24	NA	62804719	62808479	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_62804700_62808500
transcript_23690.known	chr10	-	2979	2	FSM	ENSG00000122877.18	ENST00000242480.4	2979	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGTTGCAGAAATCATT	-62816343	True	NA	NA	False	AATAAA	-16	NA	62816366	62811995	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_62814469_62815860
transcript_23691.known	chr10	-	3157	2	FSM	ENSG00000122877.18	ENST00000439032.6	3155	2	-2	0	-2	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGTAAATAAATACTTTTC	-62816015	False	NA	NA	False	NA	NA	NA	62816031	62812022	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_62814469_62815320
transcript_23693.nnic	chr10	+	2073	5	NNC	ENSG00000148572.16	novel	1813	4	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	232.243406795543	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTTGTTGAACGTGGTT	63129924	True	NA	9	True	AATAAA	-15	NA	63133290	63155024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_63133501_63146208_63146294_63150133_63150357_63152149_63152191_63153510
transcript_23696.known	chr10	+	1813	4	FSM	ENSG00000148572.16	ENST00000277746.11	1813	4	0	0	0	0	multi-exon	FALSE	canonical	3	477	junction_1	14.142135623731	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTTGTTGAACGTGGTT	63129961	True	NA	9	True	AATAAA	-15	NA	63133327	63155024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_63133501_63146208_63146294_63152149_63152191_63153510
transcript_23705.nic	chr10	-	4977	9	ISM	ENSG00000171988.20	ENST00000542921.5	8149	25	-215	39388	-28	8446	5prime_fragment	FALSE	canonical	3	99	junction_8	23.9005099317985	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACTAATAAAATGGAAAATT	-63269266	False	NA	15	True	GATAAA	-3	NA	63269281	63206977	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_63208802_63209062_63209236_63213472_63215152_63215262_63215456_63215552_63215697_63217206_63217332_63219877_63219984_63264650_63264765_63268662
transcript_23720.nic	chr10	-	1500	7	ISM	ENSG00000171988.20	ENST00000542921.5	8149	25	-215	47363	-28	471	5prime_fragment	FALSE	canonical	3	99	junction_6	21.7383429809072	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACTTCAAAAATAAATGGAG	-63269266	False	NA	NA	False	AATAAA	-3	NA	63269281	63214952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_63215152_63215262_63215456_63215552_63215697_63217206_63217332_63219877_63219984_63264650_63264765_63268662
transcript_23724.nic	chr10	-	1375	7	ISM	ENSG00000171988.20	ENST00000399262.7	8758	26	-45	48038	-45	161	5prime_fragment	FALSE	canonical	3	19	junction_6	51.6806432708503	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGACCCACTTTTTTTTT	-63465290	True	NA	34	True	NA	NA	NA	63466022	63215262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_63215456_63215552_63215697_63217206_63217332_63219877_63219984_63264650_63264765_63380317_63380483_63465494
transcript_23725.nic	chr10	-	1157	7	NIC	ENSG00000171988.20	novel	8758	26	NA	NA	-197	161	combination_of_known_junctions	FALSE	canonical	3	33	junction_5	46.5215004057264	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGACCCACTTTTTTTTT	-63522022	False	NA	34	True	NA	NA	NA	63522047	63215262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_63215456_63215552_63215697_63217206_63217332_63219877_63219984_63264650_63264765_63380317_63380483_63521737
transcript_23730.nic	chr10	-	1394	6	NIC	ENSG00000171988.20	novel	8149	25	NA	NA	-28	471	combination_of_known_junctions	FALSE	canonical	3	46	junction_4	40.5294954323391	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACTTCAAAAATAAATGGAG	-63269266	False	NA	NA	False	AATAAA	-3	NA	63269281	63214952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_63215152_63215262_63215456_63215552_63215697_63217206_63217332_63264650_63264765_63268662
transcript_23732.nic	chr10	-	1268	6	NIC	ENSG00000171988.20	novel	8149	25	NA	NA	-28	345	combination_of_known_junctions	FALSE	canonical	3	46	junction_4	40.5294954323391	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAAAAGACTTCGAACTG	-63269266	False	NA	NA	False	AATAAA	-36	NA	63269281	63215078	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_63215152_63215262_63215456_63215552_63215697_63217206_63217332_63264650_63264765_63268662
transcript_23735.known	chr10	-	734	6	FSM	ENSG00000171988.20	ENST00000469152.5	734	6	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_5	22.3696222587687	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACCAGCAATGAACTCCC	-63268860	False	953	-127	True	NA	NA	NA	63268875	63215423	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_63215456_63215552_63215697_63217206_63217332_63219877_63219984_63264650_63264765_63268662
transcript_2374.nic	chr1	-	1048	8	NIC	ENSG00000162441.12	novel	652	5	NA	NA	22	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	48.0832611206852	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATAGGCCGGGTGTGGTGG	-9941198	True	NA	-3	True	AATAAA	-23	NA	9943369	9922112	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_9922359_9931890_9931973_9932802_9932899_9934761_9934861_9935491_9935628_9936518_9936628_9942623_9942783_9943248
transcript_23741.nic	chr10	-	1195	5	NIC	ENSG00000171988.20	novel	8149	25	NA	NA	-28	161	combination_of_known_junctions	FALSE	canonical	3	46	junction_3	42.9941856534113	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGACCCACTTTTTTTTT	-63269266	False	NA	34	True	NA	NA	NA	63269281	63215262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_63215456_63215552_63215697_63217206_63217332_63264650_63264765_63268662
transcript_23749.nnic	chr10	-	899	2	ISM	ENSG00000171988.20	ENST00000399262.7	8758	26	-39	212881	-39	-160229	5prime_fragment	FALSE	canonical	3	19	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGGATGTGGTGGCACA	-63465284	True	NA	NA	False	AAAAAG	-37	NA	63466016	63380105	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_63380483_63465494
transcript_2375.known	chr1	-	4989	8	FSM	ENSG00000162441.12	ENST00000377223.6	4989	8	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_7	24.4682217897219	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTCCACGTTTTTCTT	-9941220	True	NA	-1	True	AATAAA	-35	NA	9943391	9926292	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_9930458_9931890_9931973_9932802_9932899_9934761_9934861_9935491_9935628_9936518_9936628_9942623_9942783_9943248
transcript_23751.known	chr10	+	1335	1	FSM	ENSG00000272767.1	ENST00000609436.1	1335	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTCACTGCTTTATTATA	63465127	True	NA	14	True	TTTAAA	-1	NA	63465228	63466563	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_63465200_63466600
transcript_23752.known	chr10	+	5172	8	FSM	ENSG00000165476.14	ENST00000373758.5	5172	8	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_5	35.8466119994168	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGAACGGCATTTTTTT	63518503	True	NA	NA	False	AATAAA	-18	NA	63521400	63625128	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_63521578_63566337_63566411_63594777_63594855_63598023_63598145_63599169_63599284_63610186_63610335_63619654_63619801_63620812
transcript_23756.nic	chr10	+	745	6	ISM	ENSG00000165476.14	ENST00000373758.5	5172	8	-62	14821	-62	-10515	5prime_fragment	FALSE	canonical	3	143	junction_5	33.9623320754038	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAACCAGCCCCCAGTGAA	63518441	True	NA	NA	False	AAAAAG	-5	NA	63521338	63610307	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_63521578_63566337_63566411_63594777_63594855_63598023_63598145_63599169_63599284_63610186
transcript_23757.nic	chr10	+	707	5	ISM	ENSG00000165476.14	ENST00000373758.5	5172	8	-62	25762	-62	-21456	5prime_fragment	FALSE	canonical	3	181	junction_4	23.466731770743	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGCATTTTGCTATATT	63518441	True	NA	NA	False	AATAAA	-31	NA	63521338	63599366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_63521578_63566337_63566411_63594777_63594855_63598023_63598145_63599169
transcript_2376.known	chr1	-	945	8	FSM	ENSG00000162441.12	ENST00000377213.1	945	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_7	38.4447655734822	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTTTATGCTCTTCAT	NA	False	NA	-24	True	CATAAA	-14	NA	9943407	9930252	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_9930458_9931890_9931973_9932802_9932899_9934761_9934861_9935491_9935628_9936518_9936628_9942623_9942783_9943348
transcript_23760.known	chr10	+	1686	7	FSM	ENSG00000228065.12	ENST00000600848.2	1686	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	9.22707369044427	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGGAAGGCAGAAGGAGAG	65569684	True	NA	NA	False	AATAAA	-16	NA	65570517	65698716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_65570760_65571424_65571580_65572934_65573057_65585484_65585803_65615635_65615762_65689502_65689612_65698102
transcript_23763.known	chr10	-	1221	5	FSM	ENSG00000108176.15	ENST00000225171.7	1221	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	3.83242742918897	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATGAATTTATAATTCAA	-67837956	True	NA	-18	True	AATAAA	-19	NA	67838188	67796668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_67797211_67805582_67805788_67811523_67811664_67823313_67823393_67837933
transcript_23766.known	chr10	+	4107	9	FSM	ENSG00000096717.12	ENST00000212015.11	4107	9	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_6	30.7771729533432	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGTTTAAGGTATATAAT	67873227	True	NA	48	True	ATTAAA	-31	NA	67884655	67918390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_67885152_67887416_67887534_67888881_67889124_67891401_67891555_67906789_67906938_67908045_67908126_67909255_67909443_67912473_67913032_67916264
transcript_23771.known	chr10	-	4445	26	FSM	ENSG00000148634.16	ENST00000395198.7	4445	26	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_9	25.4704848795621	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTCAGTGGTTCTCAT	-68072393	True	NA	-8	True	AATAAA	-21	NA	68075283	67921907	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_67923140_67925084_67925188_67932596_67932781_67936152_67936236_67939587_67939655_67940938_67941106_67954594_67954739_67954962_67955131_67956877_67956977_67959112_67959137_67966682_67966803_67988662_67988836_67990210_67990401_67990903_67991016_67991139_67991200_67992198_67992324_67992605_67992683_68014025_68014187_68025545_68025677_68032777_68032870_68033964_68034187_68038092_68038170_68044403_68044564_68072882_68073187_68073656_68073687_68075143
transcript_23774.known	chr10	-	4424	25	FSM	ENSG00000148634.16	ENST00000373700.9	4424	25	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_9	17.194152752866	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCAGTGGTTCTCATATA	-68072393	True	NA	-5	True	AATAAA	-24	NA	68075283	67921904	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_67923140_67925084_67925188_67932596_67932781_67936152_67936236_67939587_67939655_67940938_67941106_67954594_67954739_67954962_67955131_67956877_67956977_67966682_67966803_67988662_67988836_67990210_67990401_67990903_67991016_67991139_67991200_67992198_67992324_67992605_67992683_68014025_68014187_68025545_68025677_68032777_68032870_68033964_68034187_68038092_68038170_68044403_68044564_68072882_68073187_68073656_68073687_68075143
transcript_23784.nic	chr10	-	2283	16	ISM	ENSG00000148634.16	ENST00000412272.6	4211	24	-43	44709	-25	-1825	5prime_fragment	FALSE	canonical	3	68	junction_3	11.9925903049434	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTGGTTTTGAAATGAGA	-68072436	True	NA	-19	True	AATAAA	-13	NA	68075326	67966616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_67966803_67988662_67988836_67990210_67990401_67990903_67991016_67991139_67991200_67992198_67992324_67992605_67992683_68014025_68014187_68025545_68025677_68032777_68032870_68033964_68034187_68038092_68038170_68044403_68044564_68072882_68073187_68073656_68073687_68075143
transcript_23788.known	chr10	-	3385	4	FSM	ENSG00000148634.16	ENST00000492996.6	3385	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	43.058100283222	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGATTACTTGGCTTGC	-68072393	True	NA	-15	True	AATAAA	-18	NA	68075283	68067688	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_68070600_68072882_68073187_68073656_68073687_68075143
transcript_23792.known	chr10	-	4502	18	FSM	ENSG00000204130.14	ENST00000388768.6	4502	18	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_17	6.83467649330721	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCTGCTTTAAAAGGGCAA	-68406486	True	NA	-10	True	AATAAA	-39	NA	68407189	68343518	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_68345912_68346006_68346085_68355352_68355402_68363589_68363685_68363983_68364114_68376852_68376973_68379423_68379522_68381231_68381400_68383797_68383915_68384050_68384153_68386058_68386129_68393137_68393204_68394074_68394137_68394327_68394452_68396779_68396882_68401619_68401738_68404670_68404845_68406753
transcript_23795.nic	chr10	+	1409	10	NIC	ENSG00000096746.18	novel	1332	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	580	junction_4	426.723809830836	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGATGTTGATACTTTT	68304823	True	NA	28	True	AATAAA	-15	NA	68332062	68342271	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_68332236_68337198_68337334_68337857_68337997_68338502_68338643_68339139_68339227_68339439_68339556_68341173_68341310_68341584_68341681_68341758_68341852_68341977
transcript_23796.nic	chr10	+	2348	10	NIC	ENSG00000096746.18	novel	1332	10	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	580	junction_4	426.723809830836	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGGCGTCTGTCCTAG	68304804	True	NA	28	True	AATAAA	-19	NA	68332043	68343191	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_68332236_68337198_68337334_68337857_68337997_68338502_68338643_68339139_68339227_68339439_68339556_68341173_68341310_68341584_68341681_68341758_68341852_68341977
transcript_23797.nic	chr10	+	1476	10	NIC	ENSG00000096746.18	novel	2356	10	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	586	junction_1	379.283762952629	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGATGTTGATACTTTT	68304801	True	NA	28	True	AATAAA	-15	NA	68332040	68342271	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_68332236_68337198_68337334_68337857_68337997_68338502_68338688_68339139_68339227_68339439_68339556_68341173_68341310_68341584_68341681_68341758_68341852_68341977
transcript_23798.nic	chr10	+	2393	10	NIC	ENSG00000096746.18	novel	2356	10	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	586	junction_1	379.283762952629	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGGCGTCTGTCCTAG	68304804	True	NA	28	True	AATAAA	-19	NA	68332043	68343191	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_68332236_68337198_68337334_68337857_68337997_68338502_68338688_68339139_68339227_68339439_68339556_68341173_68341310_68341584_68341681_68341758_68341852_68341977
transcript_23799.known	chr10	+	1332	10	FSM	ENSG00000096746.18	ENST00000354695.5	1332	10	0	0	0	0	multi-exon	FALSE	canonical	3	580	junction_4	394.725815137296	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGATGTTGATACTTTTT	68304882	True	NA	29	True	AATAAA	-16	NA	68332121	68342272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_68332217_68337198_68337334_68337857_68337997_68338502_68338643_68339139_68339227_68339439_68339556_68341173_68341310_68341584_68341681_68341758_68341852_68341977
transcript_238.known	SIRV7	-	2498	5	FSM	SIRV7A	SIRV703	2498	5	0	0	0	0	multi-exon	FALSE	canonical	3	1263	junction_2	1949.6738188733	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGTTAATATGAATCAAC	NA	False	NA	NA	False	TATAAA	-22	NA	147918	1000	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV7_-_2676_2993_3112_3809_3897_114680_114989_147608
transcript_23801.known	chr10	+	2356	10	FSM	ENSG00000096746.18	ENST00000265866.12	2356	10	0	0	0	0	multi-exon	FALSE	canonical	3	760	junction_1	341.210083361636	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGCGTCTGTCCTAGAA	68304824	True	NA	30	True	AATAAA	-21	NA	68332063	68343193	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_68332217_68337198_68337334_68337857_68337997_68338502_68338688_68339139_68339227_68339439_68339556_68341173_68341310_68341584_68341681_68341758_68341852_68341977
transcript_23806.known	chr10	-	2588	10	FSM	ENSG00000108187.16	ENST00000358769.7	2588	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	4.00308522992263	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATGCCTTAACTTACTG	-68332833	True	NA	NA	False	AATAAA	-17	NA	68332928	68282659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_68284290_68285347_68285411_68288482_68288662_68288930_68289020_68292009_68292040_68292128_68292239_68296265_68296365_68296885_68296986_68306760_68306904_68332783
transcript_23807.known	chr10	-	2165	10	FSM	ENSG00000108187.16	ENST00000309049.8	2165	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	3.97212509593766	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGGAATGT	-68332811	True	NA	NA	False	NA	NA	NA	68332906	68283063	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_68284290_68285347_68285411_68288482_68288662_68288930_68289020_68292009_68292040_68292128_68292239_68296265_68296365_68296885_68296986_68306760_68306907_68332783
transcript_23826.known	chr10	+	635	5	FSM	ENSG00000096746.18	ENST00000486854.5	635	5	0	0	0	0	multi-exon	FALSE	canonical	3	760	junction_1	347.206260744244	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGACAGAATGAGAGATGG	68304863	True	NA	13	True	NA	NA	NA	68332102	68339201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_68332217_68337198_68337334_68337857_68337997_68338502_68338688_68339139
transcript_2383.known	chr1	+	3734	5	FSM	ENSG00000173614.14	ENST00000377205.6	3734	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	4.12310562561766	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGTAGTCTGATGGA	9942986	True	NA	NA	False	AATAAA	-14	NA	9943474	9985498	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_9943516_9972017_9972189_9975591_9975776_9981030_9981171_9982300
transcript_23831.nic	chr10	-	4284	21	NIC	ENSG00000138346.15	novel	4267	21	NA	NA	-21	-4	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_8	50.3521598345096	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATCTTAACTGTGTCAAT	-68467516	True	NA	-8	True	AATAAA	-14	NA	68471994	68414067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_68415106_68416706_68416856_68419033_68419214_68419802_68419893_68422224_68422430_68422514_68422605_68422696_68422891_68430435_68430661_68431861_68431972_68432205_68432316_68432393_68432511_68437010_68437242_68442916_68443112_68444920_68445084_68446295_68446414_68450027_68450248_68459103_68459236_68465666_68465813_68468122_68468307_68469980_68470164_68471790
transcript_23835.nnic	chr10	-	4053	20	NIC	ENSG00000138346.15	novel	4267	21	NA	NA	-21	-4	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_8	66.1306940691003	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATCTTAACTGTGTCAAT	-68467516	True	NA	-8	True	AATAAA	-14	NA	68471994	68414067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_68415106_68416706_68416856_68419033_68419214_68419802_68419893_68422224_68422430_68422514_68422605_68422696_68422891_68430435_68430661_68431861_68431972_68432205_68432316_68432393_68432511_68442916_68443112_68444920_68445084_68446295_68446414_68450027_68450248_68459103_68459236_68465666_68465813_68468122_68468307_68469980_68470164_68471790
transcript_23844.nic	chr10	-	1833	11	ISM	ENSG00000138346.15	ENST00000399179.6	3207	22	127	17465	-21	4400	internal_fragment	FALSE	canonical	3	172	junction_1	24.7872951327893	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGATATAGATACCCCAT	-68467516	True	NA	NA	False	AAGAAA	-5	NA	68471994	68432453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_68432511_68437010_68437242_68442916_68443112_68444920_68445084_68446295_68446414_68450027_68450248_68459103_68459236_68465666_68465813_68468122_68468307_68469980_68470164_68471790
transcript_23846.nic	chr10	-	2964	10	ISM	ENSG00000138346.15	ENST00000399179.6	3207	22	127	20834	-21	1031	internal_fragment	FALSE	canonical	3	173	junction_2	23.7008100085573	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATAGTTGTGATATAAGT	-68467516	True	NA	-3	True	AATAAA	-18	NA	68471994	68435822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_68437242_68442916_68443112_68444920_68445084_68446295_68446414_68450027_68450248_68459103_68459236_68465666_68465813_68468122_68468307_68469980_68470164_68471790
transcript_23847.nic	chr10	-	2215	10	ISM	ENSG00000138346.15	ENST00000399179.6	3207	22	127	21583	-21	282	internal_fragment	FALSE	canonical	3	173	junction_2	23.7008100085573	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGATCATTAACCATTTTAA	-68467516	True	NA	NA	False	AATAAA	-26	NA	68471994	68436571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_68437242_68442916_68443112_68444920_68445084_68446295_68446414_68450027_68450248_68459103_68459236_68465666_68465813_68468122_68468307_68469980_68470164_68471790
transcript_23850.nic	chr10	-	1418	9	ISM	ENSG00000138346.15	ENST00000399179.6	3207	22	127	28055	-21	-6190	internal_fragment	FALSE	canonical	3	173	junction_1	22.7042809839907	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAGCATCTGAAGCAAACA	-68467516	True	NA	NA	False	AATAGA	-9	NA	68471994	68443043	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_68443112_68444920_68445084_68446295_68446414_68450027_68450248_68459103_68459236_68465666_68465813_68468122_68468307_68469980_68470164_68471790
transcript_23852.known	chr10	-	4267	21	FSM	ENSG00000138346.15	ENST00000358410.8	4267	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	64.3624696542946	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAACTGTGTCAATTATT	-68467495	True	NA	-4	True	AATAAA	-18	NA	68471973	68414063	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_68415108_68416708_68416856_68419033_68419214_68419802_68419893_68422224_68422430_68422514_68422605_68422696_68422891_68430435_68430661_68431861_68431972_68432205_68432316_68432393_68432511_68437010_68437242_68442916_68443112_68444920_68445084_68446295_68446414_68450027_68450248_68459103_68459236_68465666_68465813_68468122_68468307_68469980_68470164_68471790
transcript_23853.known	chr10	-	1121	10	FSM	ENSG00000122912.15	ENST00000493963.5	1121	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	9.31479640672653	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAACATACGAACTTATGA	-68526850	True	NA	NA	False	NA	NA	NA	68527438	68483474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_68483589_68487143_68487213_68488466_68488630_68493131_68493199_68493448_68493571_68503631_68503696_68506584_68506719_68516750_68516844_68517083_68517186_68527245
transcript_23856.known	chr10	-	6581	9	FSM	ENSG00000122912.15	ENST00000609923.6	6581	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_8	6.7349368965121	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAGCTTGTGGAAAGTGC	-68526935	True	NA	NA	False	AATAAA	-21	NA	68527523	68477997	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_68483589_68487143_68487213_68488466_68488630_68493131_68493199_68493448_68493571_68503631_68503696_68506584_68506719_68516750_68516844_68527245
transcript_23864.nic	chr10	+	4042	4	ISM	ENSG00000138336.9	ENST00000373644.5	9612	12	-61	48305	-61	-48305	5prime_fragment	TRUE	canonical	3	68	junction_2	7.84573486395988	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACCCCATCAAGAGATCG	68560264	False	NA	NA	False	AAAAAG	-7	NA	68560275	68646182	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_68560743_68572216_68574253_68600980_68601035_68644697
transcript_23866.nic	chr10	+	660	2	ISM	ENSG00000138336.9	ENST00000373644.5	9612	12	-61	122078	-61	-122078	5prime_fragment	FALSE	canonical	3	80	junction_1	0	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGCCAACTACGAAAGACAA	68560264	False	NA	NA	False	AAAAAG	-6	NA	68560275	68572409	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_68560743_68572216
transcript_23867.nic	chr10	+	755	2	ISM	ENSG00000138336.9	ENST00000373644.5	9612	12	-61	121983	-61	-121983	5prime_fragment	FALSE	canonical	3	80	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGATGTTAAGAAAAAAACA	68560264	False	NA	NA	False	ATTAAA	-18	NA	68560275	68572504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_68560743_68572216
transcript_23868.known	chr10	+	9612	12	FSM	ENSG00000138336.9	ENST00000373644.5	9612	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	44.4918044268495	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTCATCTAACATTATTT	68551953	True	NA	12	True	AATAAA	-32	NA	68560336	68694487	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_68560743_68572216_68574253_68600980_68601035_68644697_68647006_68651845_68651937_68652500_68652595_68667044_68667257_68672894_68673046_68681398_68681489_68682835_68682974_68686355_68686708_68690807
transcript_23869.known	chr10	+	2295	1	FSM	ENSG00000260400.1	ENST00000562082.1	2295	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATAGTCTAATTTTTCT	68698479	False	NA	21	True	AATAAA	-21	NA	68698499	68700794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_68698500_68700800
transcript_23878.nic	chr10	+	2601	18	ISM	ENSG00000060339.14	ENST00000265872.11	4658	25	-83	21046	12	0	5prime_fragment	FALSE	canonical	0	0	junction_14	103.713939829123	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GATGAGAGAAAAGATAAAAA	68721027	True	NA	4	True	GATAAA	-13	NA	68721155	68771331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_68721283_68722454_68722578_68736875_68737049_68737844_68737890_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68756272_68756484_68757293_68757378_68761006_68761193_68765887_68766080_68771205
transcript_23879.nic	chr10	+	2688	18	ISM	ENSG00000060339.14	ENST00000265872.11	4658	25	-83	20959	12	0	5prime_fragment	FALSE	canonical	0	0	junction_14	103.713939829123	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAAGATAGAGATGA	68721027	True	NA	-13	True	GATAAA	-4	NA	68721155	68771418	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_68721283_68722454_68722578_68736875_68737049_68737844_68737890_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68756272_68756484_68757293_68757378_68761006_68761193_68765887_68766080_68771205
transcript_23897.known	chr10	+	2432	17	FSM	ENSG00000060339.14	ENST00000541012.5	2432	17	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_13	92.7738345386241	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCTGTAATAACAACCTGC	68713580	True	NA	13	True	GATAAA	-30	NA	68721226	68771444	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_68721283_68722454_68722578_68736875_68737049_68737844_68737890_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68757293_68757378_68761006_68761193_68765887_68766080_68771205
transcript_239.known	SIRV7	-	2462	5	FSM	SIRV7A	SIRV705	2462	5	0	0	0	0	multi-exon	FALSE	canonical	3	2237	junction_2	1447.67371582826	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATTAGTGTTAATATGAA	NA	False	NA	NA	False	TATAAA	-17	NA	147925	1005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV7_-_2676_2993_3112_43028_43078_114680_114989_147608
transcript_2390.known	chr1	-	1405	7	FSM	ENSG00000162441.12	ENST00000400903.6	1405	7	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	12.2202018532156	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGACCATCCCCCAGCCT	-9940597	False	NA	-22	True	AATAAA	-17	NA	9942768	9929719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_9930458_9931890_9931973_9932802_9932899_9934761_9934861_9935491_9935628_9936518_9936628_9942623
transcript_23904.nic	chr10	+	2556	17	ISM	ENSG00000060339.14	ENST00000539539.5	3224	22	-83	16985	12	0	5prime_fragment	FALSE	canonical	0	0	junction_13	129.747290434136	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GATGAGAGAAAAGATAAAAA	68721027	True	NA	4	True	GATAAA	-13	NA	68721155	68771331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_68721283_68722454_68722578_68736875_68737049_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68756272_68756484_68757293_68757378_68761006_68761193_68765887_68766080_68771205
transcript_23905.nic	chr10	+	2643	17	ISM	ENSG00000060339.14	ENST00000539539.5	3224	22	-83	16898	12	0	5prime_fragment	FALSE	canonical	0	0	junction_13	129.747290434136	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAAGATAGAGATGA	68721027	True	NA	-13	True	GATAAA	-4	NA	68721155	68771418	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_68721283_68722454_68722578_68736875_68737049_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68756272_68756484_68757293_68757378_68761006_68761193_68765887_68766080_68771205
transcript_2391.known	chr1	+	625	4	FSM	ENSG00000162444.12	ENST00000294435.8	625	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	0.816496580927726	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAAGTTTTTCCTTTCCG	9996906	True	NA	10	True	AATAAA	-15	NA	9997227	10016021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_9997332_10007569_10007749_10008172_10008275_10015781
transcript_23912.nic	chr10	+	2205	16	ISM	ENSG00000060339.14	ENST00000265872.11	4658	25	-83	31263	12	3816	5prime_fragment	FALSE	canonical	0	0	junction_14	103.15545981134	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAACAGAAGGAGTTAGA	68721027	True	NA	23	True	AAAACA	-23	NA	68721155	68761114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_68721283_68722454_68722578_68736875_68737049_68737844_68737890_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68756272_68756484_68757293_68757378_68761006
transcript_23913.nic	chr10	+	2225	16	ISM	ENSG00000060339.14	ENST00000265872.11	4658	25	-28	31188	-5	3891	5prime_fragment	FALSE	canonical	0	0	junction_14	103.15545981134	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTATGTACTCAATCTAT	68713564	True	NA	26	True	GATAAA	-1	NA	68721210	68761189	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_68721283_68722454_68722578_68736875_68737049_68737844_68737890_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68756272_68756484_68757293_68757378_68761006
transcript_23916.known	chr10	+	4540	24	FSM	ENSG00000060339.14	ENST00000630771.2	4540	24	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_13	115.288952346187	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGTGTACTTCCTTCAG	68721114	False	NA	17	True	ATTAAA	-17	NA	68721143	68792375	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_68721283_68722454_68722578_68736875_68737049_68737844_68737890_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68757293_68757378_68761006_68761193_68765887_68766080_68771205_68771446_68772987_68773100_68786135_68786219_68786545_68786693_68787926_68788048_68788142_68788329_68789709_68789916_68791206
transcript_23922.known	chr10	+	2407	16	FSM	ENSG00000060339.14	ENST00000543225.5	2407	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	140.512142614872	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAGGATAAAAA	68713595	True	NA	18	True	NA	NA	NA	68721241	68771301	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_68721283_68722454_68722578_68736875_68737049_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68756272_68756484_68757293_68757378_68761006_68761193_68765887_68766080_68771205
transcript_23932.nic	chr10	+	2108	15	ISM	ENSG00000060339.14	ENST00000539539.5	3224	22	-31	27202	-8	3816	5prime_fragment	FALSE	canonical	0	0	junction_13	129.664106877134	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAACAGAAGGAGTTAGA	68713561	True	NA	23	True	AAAACA	-23	NA	68721207	68761114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_68721283_68722454_68722578_68736875_68737049_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68756272_68756484_68757293_68757378_68761006
transcript_2395.known	chr1	+	5905	28	FSM	ENSG00000130939.20	ENST00000343090.11	5905	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	90.5892158905534	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTTTGAGTCTCTTCTC	10029563	True	NA	NA	False	AATAAA	-24	NA	10032957	10181239	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_10033695_10072027_10072215_10095460_10095597_10101107_10101196_10102947_10103093_10105515_10105745_10106196_10106584_10117458_10117601_10119512_10119614_10121961_10122077_10126793_10126878_10129391_10129449_10130499_10130617_10130714_10130814_10132368_10132483_10134987_10135187_10137066_10137206_10144939_10145040_10146962_10147091_10149183_10149283_10151325_10151562_10158355_10158483_10161141_10161287_10168135_10168271_10171137_10171330_10178643_10178819_10179415_10179563_10179894
transcript_23951.known	chr10	+	3224	22	FSM	ENSG00000060339.14	ENST00000539539.5	3224	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	140.865851818731	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAAACAGGTAAGGGT	68713592	True	NA	13	True	AAAAAG	-37	NA	68721238	68788316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_68721283_68722454_68722578_68736875_68737049_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68756272_68756484_68757293_68757378_68761006_68761193_68765887_68766080_68771205_68771446_68772987_68773100_68786135_68786219_68786545_68786693_68787926_68788048_68788142
transcript_23952.known	chr10	+	4658	25	FSM	ENSG00000060339.14	ENST00000265872.11	4658	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	121.453344665989	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGTACTTCCTTCAGAA	68713592	True	NA	19	True	ATTAAA	-19	NA	68721238	68792377	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_68721283_68722454_68722578_68736875_68737049_68737844_68737890_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68756272_68756484_68757293_68757378_68761006_68761193_68765887_68766080_68771205_68771446_68772987_68773100_68786135_68786219_68786545_68786693_68787926_68788048_68788142_68788329_68789709_68789916_68791206
transcript_23953.known	chr10	+	3387	4	FSM	ENSG00000165730.16	ENST00000298596.11	3387	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	6.97614984548545	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTAGTGAATTTTTT	68827340	True	NA	3	True	AATATA	-16	NA	68827530	68893060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_68827934_68881957_68882111_68884259_68886619_68892588
transcript_23955.known	chr10	+	3630	4	FSM	ENSG00000165730.16	ENST00000642869.1	3630	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	6.97614984548545	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTAGTGAATTTTTT	68827433	False	NA	3	True	AATATA	-16	NA	68827623	68893060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_68828270_68881957_68882111_68884259_68886619_68892588
transcript_23962.known	chr10	+	2501	15	FSM	ENSG00000107625.14	ENST00000373585.8	2501	15	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_6	31.1796146119053	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATGTGTTAAGAATTTTC	68896801	True	NA	24	True	AATAAA	-28	NA	68901314	68946847	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_68901472_68906710_68907008_68910306_68910383_68911067_68911247_68913161_68913280_68913390_68913577_68914058_68914205_68919831_68919982_68934198_68934361_68934798_68934919_68936005_68936080_68936935_68937096_68941059_68941195_68943212_68943258_68946351
transcript_23970.nic	chr10	+	764	4	ISM	ENSG00000107625.14	ENST00000373585.8	2501	15	-69	35615	-40	-1998	5prime_fragment	FALSE	canonical	3	282	junction_2	13.6950923894494	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCGCTCACCAAAGGTAATC	68896732	True	NA	NA	False	ATTAAA	-5	NA	68901245	68911232	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_68901472_68906710_68907008_68910306_68910383_68911067
transcript_23974.nic	chr10	+	328	2	ISM	ENSG00000107625.14	ENST00000373585.8	2501	15	-69	40035	-40	-6418	5prime_fragment	FALSE	canonical	3	284	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTAAAATGAAAGAGAAGCT	68896732	True	NA	NA	False	NA	NA	NA	68901245	68906812	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_68901472_68906710
transcript_23975.nic	chr10	+	421	2	ISM	ENSG00000107625.14	ENST00000373585.8	2501	15	-69	39942	-40	-6325	5prime_fragment	FALSE	canonical	3	284	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCTACCAAATGGAGATAT	68896732	True	NA	NA	False	AATAGA	-43	NA	68901245	68906905	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_68901472_68906710
transcript_23977.known	chr10	+	4664	15	FSM	ENSG00000165732.14	ENST00000354185.9	4664	15	0	0	0	0	multi-exon	FALSE	canonical	3	640	junction_3	56.7997287288722	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTAGTGGCTTTTGTTTTC	68932654	True	NA	14	True	AATAAA	-16	NA	68956169	68985068	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_68956313_68959805_68960250_68962081_68962158_68963290_68963470_68965376_68965495_68967017_68967204_68968975_68969122_68970200_68970351_68971890_68972053_68973544_68973665_68974669_68974744_68977528_68977689_68978841_68978977_68981536_68981582_68982542
transcript_23978.known	chr10	+	4829	15	FSM	ENSG00000165732.14	ENST00000620315.2	4776	15	29	-82	29	-1	multi-exon	FALSE	canonical	3	26	junction_1	189.216806864507	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTAGTGGCTTTTGTTTT	68956417	True	NA	13	True	AATAAA	-15	NA	68956439	68985067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_68956749_68959805_68960250_68962081_68962158_68963290_68963470_68965376_68965495_68967017_68967204_68968975_68969122_68970200_68970351_68971890_68972053_68973544_68973665_68974669_68974744_68977528_68977689_68978841_68978977_68981536_68981582_68982542
transcript_23983.nic	chr10	+	348	2	ISM	ENSG00000165732.14	ENST00000687162.1	2295	14	-20	19332	-17	-19332	5prime_fragment	FALSE	canonical	3	685	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAGCCATCTCAAAATGA	68932602	True	NA	-12	True	AAAAAG	-13	NA	68956117	68959958	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_68956313_68959805
transcript_23984.nic	chr10	+	404	2	ISM	ENSG00000165732.14	ENST00000687162.1	2295	14	-20	19276	-17	-19276	5prime_fragment	FALSE	canonical	3	685	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGCCCATTGAAAAGAAAG	68932602	True	NA	6	True	AAGAAA	-3	NA	68956117	68960014	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_68956313_68959805
transcript_23985.nic	chr10	+	500	2	ISM	ENSG00000165732.14	ENST00000687162.1	2295	14	-20	19180	-17	-19180	5prime_fragment	FALSE	canonical	3	685	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGATGAAGAAAGAAAAGG	68932602	True	NA	75	True	AATAGA	-16	NA	68956117	68960110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_68956313_68959805
transcript_23988.known	chr10	+	2583	8	FSM	ENSG00000198954.9	ENST00000635779.2	2583	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	165.181903441296	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTTCTGTTTCCTTTTT	68983412	True	NA	NA	False	AATAAA	-25	NA	68988802	69016978	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_68989259_69000423_69000523_69005045_69005126_69005731_69005916_69007626_69007752_69008840_69008926_69010899_69011016_69015540
transcript_23989.known	chr10	+	2533	8	FSM	ENSG00000198954.9	ENST00000638119.2	2533	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	165.902479345733	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTTCTGTTTCCTTTTT	68983412	True	NA	NA	False	AATAAA	-25	NA	68988802	69016978	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_68989259_68995203_68995279_69000423_69000523_69005045_69005126_69005731_69005916_69008840_69008926_69010899_69011016_69015540
transcript_23990.known	chr10	+	2462	7	FSM	ENSG00000198954.9	ENST00000361983.7	2462	7	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_3	23.2999761564017	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTTTCCTTTTTGTTT	68983412	True	NA	NA	False	AATAAA	-29	NA	68988802	69016982	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_68989259_69000423_69000523_69005045_69005126_69005731_69005916_69008840_69008926_69010899_69011016_69015540
transcript_23991.known	chr10	+	4294	7	FSM	ENSG00000198954.9	ENST00000674688.1	4294	7	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	135.476217675117	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTTCTGTTTCCTTTTT	68983412	True	NA	NA	False	AATAAA	-25	NA	68988802	69016978	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_68989259_69000423_69000523_69005045_69005126_69005731_69007752_69008840_69008926_69010899_69011016_69015540
transcript_23992.known	chr10	+	2412	7	FSM	ENSG00000198954.9	ENST00000676080.1	2412	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	140.377368388054	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTTCTGTTTCCTTTTT	68983412	True	NA	NA	False	AATAAA	-25	NA	68988802	69016978	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_68989213_69000423_69000523_69005045_69005126_69005731_69005916_69008840_69008926_69010899_69011016_69015540
transcript_23993.known	chr10	+	890	4	FSM	ENSG00000198954.9	ENST00000625461.2	890	4	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_3	25.5255862921022	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATACTATCTTTTAAAAA	68983412	True	NA	NA	False	TATAAA	-22	NA	68988802	69005986	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_68989259_69000423_69000523_69005045_69005126_69005731
transcript_23996.known	chr10	+	4227	9	FSM	ENSG00000122958.15	ENST00000263559.11	4227	9	0	0	0	0	multi-exon	FALSE	canonical	3	611	junction_8	60.8911682840788	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAATTTTCTCATTGTT	69114356	True	NA	NA	False	ATTAAA	-21	NA	69124177	69174412	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_69124281_69132897_69133048_69155811_69155888_69157006_69157164_69158046_69158212_69162405_69162513_69166041_69166111_69168488_69168632_69171155
transcript_24.known	ERCC-00062	+	1007	1	FSM	ERCC-00062A	DQ516786	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AATACA	-36	NA	0	1007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00062_+_0_1000
transcript_2400.known	chr1	+	4772	27	FSM	ENSG00000130939.20	ENST00000253251.12	4772	27	0	0	0	0	multi-exon	FALSE	canonical	2	219	junction_3	40.7600134718434	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTCCCCTCTCCCCCT	NA	False	NA	-45	True	NA	NA	NA	10032831	10180367	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_10033695_10072027_10072215_10095460_10095597_10101107_10101196_10102947_10103093_10105515_10105745_10117458_10117601_10119512_10119614_10121961_10122077_10126793_10126878_10129391_10129449_10130499_10130617_10130714_10130814_10132368_10132483_10134987_10135187_10137066_10137206_10144939_10145040_10146962_10147091_10149183_10149283_10151325_10151562_10158355_10158483_10161141_10161287_10168135_10168271_10171137_10171330_10178643_10178819_10179415_10179563_10179894
transcript_24000.known	chr10	+	2554	8	FSM	ENSG00000122958.15	ENST00000395098.5	2554	8	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_7	244.31704059793	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACTGAGCTTGCTGTTT	69114330	True	NA	2	True	AATAAA	-12	NA	69124151	69172856	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_69124281_69132897_69133048_69155811_69155888_69157006_69157164_69158046_69158212_69162405_69162513_69166041_69166111_69171155
transcript_24003.nic	chr10	+	2600	8	NIC	ENSG00000122958.15	novel	4227	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	259.221912654004	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGCTTGCTGTTTGCATG	69114356	True	NA	7	True	AATAAA	-17	NA	69124177	69172861	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_69124281_69132897_69133048_69157006_69157164_69158046_69158212_69162405_69162513_69166041_69166111_69168488_69168632_69171155
transcript_24011.nic	chr10	+	2622	16	NIC	ENSG00000156502.14	novel	2477	15	NA	NA	-10	0	combination_of_known_junctions	TRUE	canonical	2	20	junction_1	94.4374219611414	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTTTCCTCATATGCAT	69176842	True	NA	5	True	AATAAA	-14	NA	69180223	69209093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_69180563_69182519_69182655_69185986_69186065_69186442_69186551_69187641_69187757_69189266_69189436_69191654_69191767_69195187_69195266_69196991_69197084_69198371_69198553_69199103_69199198_69200279_69200500_69202438_69202520_69202866_69203044_69207792_69207942_69208599
transcript_24014.known	chr10	+	2477	15	FSM	ENSG00000156502.14	ENST00000359655.9	2477	15	0	0	0	0	multi-exon	FALSE	canonical	2	150	junction_3	44.6778148845391	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTTTCCTCATATGCAT	69176852	True	NA	5	True	AATAAA	-14	NA	69180233	69209093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_69180563_69185986_69186065_69186442_69186551_69187641_69187757_69189266_69189436_69191654_69191767_69195187_69195266_69196991_69197084_69198371_69198553_69199103_69199198_69200279_69200500_69202438_69202520_69202866_69203044_69207792_69207942_69208599
transcript_24026.known	chr10	+	2392	6	FSM	ENSG00000156502.14	ENST00000471069.5	2392	6	0	0	0	0	multi-exon	FALSE	canonical	2	150	junction_3	40.8137231822827	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACTTTACTATTTGGTAG	69176868	True	NA	NA	False	ATTAAA	-11	NA	69180249	69193263	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_69180563_69185986_69186065_69186442_69186551_69187641_69187757_69189266_69189436_69191654
transcript_24036.known	chr10	+	3602	18	FSM	ENSG00000156515.24	ENST00000359426.7	3602	18	0	0	0	0	multi-exon	FALSE	canonical	3	1398	junction_10	111.849441562552	2520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCGAGTGATGCTTAATG	69309303	True	NA	29	True	AGTAAA	-18	NA	69318846	69401882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_69319011_69343826_69343990_69359896_69360046_69364782_69364903_69368535_69368632_69369236_69369337_69369440_69369625_69376933_69377090_69379861_69380096_69382486_69382792_69384332_69384482_69384795_69384916_69386322_69386419_69389196_69389297_69392124_69392309_69394949_69395106_69398594_69398829_69400990
transcript_24040.known	chr10	+	3745	18	FSM	ENSG00000156515.24	ENST00000493591.6	3745	18	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	388.783151770169	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTGTACCAATTCAAAGA	69309309	True	NA	11	True	NA	NA	NA	69318852	69401864	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_69319178_69343826_69343990_69359896_69360046_69364782_69364903_69368535_69368632_69369236_69369337_69369440_69369625_69376933_69377090_69379861_69380096_69382486_69382792_69384332_69384482_69384795_69384916_69386322_69386419_69389196_69389297_69392124_69392309_69394949_69395106_69398594_69398829_69400990
transcript_24107.known	chr10	+	1703	8	FSM	ENSG00000099282.10	ENST00000373290.7	1703	8	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	6.53405521487387	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTGCCTTTCCTGTGT	69450649	True	NA	16	True	AATAAA	-22	NA	69451464	69507666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_69451691_69483690_69483877_69485140_69485216_69495593_69495690_69498279_69498397_69504437_69504486_69506123_69506241_69506828
transcript_24111.nnic	chr10	+	1433	6	NIC	ENSG00000099282.10	novel	1703	8	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	19.7686620690425	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTGCCTTTCCTGTGT	69450658	True	NA	16	True	AATAAA	-22	NA	69451473	69507666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_69451691_69495593_69495690_69498279_69498397_69504437_69504486_69506123_69506241_69506828
transcript_24113.known	chr10	-	1560	2	FSM	ENSG00000122859.5	ENST00000242462.5	1560	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCGCATCTTTTTTTTTTAA	-69573217	True	NA	NA	False	NA	NA	NA	69573422	69571697	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_69573045_69573209
transcript_24114.nnic	chr10	+	522	3	FSM	ENSG00000236154.2	ENST00000685746.1	533	3	0	11	0	0	multi-exon	FALSE	canonical	3	79	junction_1	1.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATTGTAAAGTGGAGTGC	69574195	True	NA	13	True	AATAAA	-28	NA	69574917	69577154	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_69575149_69576018_69576138_69576982
transcript_24117.known	chr10	+	1073	4	FSM	ENSG00000171224.9	ENST00000373279.6	1073	4	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	37.1573231902766	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGTCCATATAAAGAAATG	69628093	True	NA	115	True	AATAAA	-17	NA	69630246	69633596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_69630314_69631479_69631548_69631708_69631840_69632789
transcript_24119.nnic	chr10	+	1148	4	NNC	ENSG00000171224.9	novel	1073	4	NA	NA	55	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	90.9077676671373	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGTCCATATAAAGAAATG	69628152	True	NA	115	True	AATAAA	-17	NA	69630305	69633596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_69630448_69631479_69631548_69631708_69631840_69632789
transcript_24120.known	chr10	+	403	4	FSM	ENSG00000171224.9	ENST00000421716.1	403	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	97.8309199020887	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCCTTCAATGACCTCAAC	69628390	False	NA	NA	False	NA	NA	NA	69630543	69632877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_69630660_69631479_69631548_69631708_69631840_69632789
transcript_24121.known	chr10	+	746	3	FSM	ENSG00000171224.9	ENST00000491890.1	746	3	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	45.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGAGCAGGCATATTTG	69628097	True	NA	NA	False	NA	NA	NA	69630250	69633112	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_69630314_69631479_69631840_69632789
transcript_24122.nnic	chr10	+	1020	3	NIC	ENSG00000171224.9	novel	1073	4	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	106.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGTCCATATAAAGAAATG	69628078	True	NA	115	True	AATAAA	-17	NA	69630231	69633596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_69630314_69631708_69631840_69632789
transcript_24138.known	chr10	+	1833	34	FSM	ENSG00000197467.17	ENST00000520133.5	1833	34	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7.95799348069293	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTCTAACCTTGGATTGG	69801854	False	NA	NA	False	NA	NA	NA	69802423	69958701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_69802718_69822368_69822439_69867797_69867806_69872183_69872211_69887455_69887492_69888303_69888331_69889413_69889441_69894551_69894579_69894674_69894702_69895549_69895577_69897474_69897532_69902747_69902856_69904932_69904960_69905786_69905823_69917288_69917334_69918284_69918318_69919061_69919089_69921881_69921936_69922707_69922795_69923801_69923856_69924962_69925008_69925803_69925873_69927086_69927111_69928936_69929000_69930042_69930088_69930399_69930553_69935349_69935392_69936755_69936783_69937634_69937716_69944124_69944179_69945670_69945725_69947306_69947343_69957003_69957043_69958698
transcript_24151.known	chr10	+	2027	10	FSM	ENSG00000099284.15	ENST00000679349.1	2027	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	135.327950996783	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTTCTTACAACATATT	70049154	True	NA	14	True	AATAAA	-9	NA	70052845	70112266	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_70053001_70055066_70055178_70075599_70075831_70090059_70090167_70091756_70091955_70093734_70093846_70095653_70095754_70100207_70100298_70109032_70109208_70111517
transcript_24154.known	chr10	+	1932	9	FSM	ENSG00000099284.15	ENST00000373255.9	1932	9	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_3	29.7436968112573	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTTTTATTGCAACATT	70049154	True	NA	30	True	AATAAA	-25	NA	70052845	70112282	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_70053001_70075599_70075831_70090059_70090167_70091756_70091955_70093734_70093846_70095653_70095754_70100207_70100298_70109032_70109208_70111517
transcript_24159.known	chr10	-	3134	9	FSM	ENSG00000042286.15	ENST00000307864.3	3134	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_8	9.06831709855803	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACTGGATCTTTTATTTT	-70132085	True	NA	NA	False	AATAAA	-19	NA	70132825	70112270	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_70114330_70114919_70115121_70116621_70116775_70117811_70117921_70120506_70120600_70121091_70121212_70123404_70123521_70123906_70124098_70132733
transcript_24170.known	chr10	+	1981	8	FSM	ENSG00000099284.15	ENST00000676699.1	1981	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	117.702669329744	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTTGATTCAGGCTTTT	NA	False	NA	6	True	NA	NA	NA	70052587	70112184	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_70053001_70075599_70075831_70090059_70090167_70091756_70091955_70095653_70095754_70100207_70100298_70109032_70109208_70111517
transcript_24179.known	chr10	-	3758	4	FSM	ENSG00000156521.14	ENST00000287078.7	3758	4	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_3	15.5134350376268	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTGTCTCTGAGCTC	-70144439	True	NA	-4	True	AATAAA	-14	NA	70146700	70137980	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_70140142_70142667_70142854_70143841_70143973_70145420
transcript_24180.known	chr10	-	2620	4	FSM	ENSG00000156521.14	ENST00000479086.1	2620	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	53.597263611743	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAAGTGTGTCTCTGAGC	-70144415	True	NA	-6	True	AATAAA	-12	NA	70146676	70137982	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_70140142_70142667_70142854_70143841_70143973_70146532
transcript_24187.nnic	chr10	-	2405	4	NNC	ENSG00000156521.14	novel	3758	4	NA	NA	-7	-1225	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	58.2027108952457	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGTATTTATATATCAA	-70144402	True	NA	-18	True	AATAAA	-18	NA	70146663	70139207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_70140142_70142667_70142765_70143841_70143973_70145420
transcript_24189.nnic	chr10	-	3465	4	NNC	ENSG00000156521.14	novel	3758	4	NA	NA	2	-1225	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	68.0898099734624	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGTATTTATATATCAA	-70144437	True	NA	-18	True	AATAAA	-18	NA	70146698	70139207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_70140142_70142667_70142854_70143841_70143973_70144484
transcript_24195.nnic	chr10	-	2423	4	NNC	ENSG00000156521.14	novel	3758	4	NA	NA	11	-1225	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	54.9969696134857	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGTATTTATATATCAA	-70144428	True	NA	-18	True	AATAAA	-18	NA	70146689	70139207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_70140142_70142764_70142854_70143841_70143973_70145420
transcript_242.nic	SIRV7	-	921	5	NIC	SIRV7A	novel	949	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	2432	junction_4	2457.74942783027	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAGAGATCGACGAAGTT	NA	False	NA	NA	False	NA	NA	NA	147957	56031	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_SIRV7_-_56098_70883_70988_78841_78964_114680_114961_147608
transcript_24202.nnic	chr10	-	2385	3	NIC	ENSG00000156521.14	novel	3758	4	NA	NA	-40	-1225	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	55.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGTATTTATATATCAA	-70146727	False	NA	-18	True	AATAAA	-18	NA	70146740	70139207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_70140142_70143841_70143973_70145420
transcript_24206.known	chr10	-	3397	2	FSM	ENSG00000156521.14	ENST00000335494.5	3397	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTGTCTCTGAGCTC	-70144395	True	NA	-4	True	AATAAA	-14	NA	70146656	70137980	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_70140142_70145420
transcript_24207.nnic	chr10	-	1113	2	NIC	ENSG00000156521.14	novel	2620	4	NA	NA	-11	-1225	combination_of_known_splicesites	FALSE	canonical	3	30	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGTATTTATATATCAA	-70144450	True	NA	-18	True	AATAAA	-18	NA	70146711	70139207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_70140142_70146532
transcript_24208.known	chr10	-	5981	8	FSM	ENSG00000079332.15	ENST00000373242.6	5981	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_7	183.89815282445	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGTTCATAGTCGATT	-70154894	True	NA	-17	True	ATTAAA	-14	NA	70170523	70147288	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_70152593_70153837_70153970_70157763_70157868_70161003_70161070_70161618_70161739_70161857_70161932_70162689_70162760_70170412
transcript_24210.known	chr10	-	5902	7	FSM	ENSG00000079332.15	ENST00000373241.9	5902	7	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_6	54.8171201967658	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGTTCATAGTCGATT	-70154885	True	NA	-17	True	ATTAAA	-14	NA	70170514	70147288	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_70152593_70153837_70153970_70157763_70157868_70161003_70161070_70161618_70161739_70161857_70161932_70170412
transcript_24217.known	chr10	-	1292	11	FSM	ENSG00000180817.12	ENST00000373232.8	1292	11	0	0	0	0	multi-exon	FALSE	canonical	3	1482	junction_8	85.3789201149792	707	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCTTAGGATATTTTTA	-70216474	True	NA	-5	True	AATAAA	-16	NA	70233429	70202834	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_70203187_70204872_70204916_70206263_70206334_70209204_70209291_70209557_70209686_70213462_70213590_70214499_70214587_70217811_70217932_70218763_70218818_70230340_70230400_70233263
transcript_24232.known	chr10	-	3095	5	FSM	ENSG00000172731.15	ENST00000373224.5	3095	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	41.583500333666	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGTTGGTGTTTGATT	-70379206	True	NA	-6	True	AATAAA	-19	NA	70382589	70298972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_70301509_70323862_70324031_70340552_70340703_70376451_70376597_70382493
transcript_24233.known	chr10	-	3074	5	FSM	ENSG00000172731.15	ENST00000446961.4	3074	5	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	12.5299640861417	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTGGTTGGTGTTTGA	-70379242	True	NA	-8	True	AATAAA	-17	NA	70382625	70298974	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_70301509_70323862_70324031_70340552_70340703_70376451_70376597_70382548
transcript_24237.known	chr10	-	2959	4	FSM	ENSG00000172731.15	ENST00000395010.5	2959	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	37.0944739819828	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTGGTGTTTGATTCAT	-70379267	True	NA	-3	True	AATAAA	-22	NA	70382650	70298969	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_70301509_70323862_70324031_70340552_70340703_70382548
transcript_24239.known	chr10	-	2924	4	FSM	ENSG00000172731.15	ENST00000358141.6	2924	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	48.451579494951	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGCCTGGTTGGTGTTTG	-70379243	True	NA	-9	True	AATAAA	-16	NA	70382626	70298975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_70301509_70323862_70324031_70376451_70376597_70382548
transcript_24241.known	chr10	-	2906	4	FSM	ENSG00000172731.15	ENST00000357631.6	2906	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	34.2928563989645	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGCCTGGTTGGTGTTTG	-70379243	True	NA	-9	True	AATAAA	-16	NA	70382626	70298975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_70301509_70340552_70340703_70376451_70376597_70382548
transcript_24244.nic	chr10	-	2765	3	NIC	ENSG00000172731.15	novel	2906	4	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	14	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGCCTGGTTGGTGTTTG	-70379247	True	NA	-9	True	AATAAA	-16	NA	70382630	70298975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_70301509_70340552_70340703_70382548
transcript_24245.nnic	chr10	+	2582	4	NNC	ENSG00000148730.7	novel	7491	3	NA	NA	-10	-4771	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	594.5498764238	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATTTTTGTTTGTTTGTT	70377653	True	NA	10	True	NA	NA	NA	70404134	70423847	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_70404207_70404354_70404547_70419913_70420100_70421715
transcript_24246.nnic	chr10	+	2647	4	NNC	ENSG00000148730.7	novel	7491	3	NA	NA	-10	-4706	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	594.5498764238	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATATTCTTGGAAAAACC	70377653	True	NA	27	True	ATTAAA	-16	NA	70404134	70423912	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_70404207_70404354_70404547_70419913_70420100_70421715
transcript_24247.known	chr10	+	7491	3	FSM	ENSG00000148730.7	ENST00000373218.5	7491	3	0	0	0	0	multi-exon	FALSE	canonical	3	1173	junction_1	80.5	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGTTTTAATTTTTTA	70377663	True	NA	44	True	AGTAAA	-16	NA	70404144	70428618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_70404547_70419913_70420100_70421715
transcript_24256.nnic	chr10	-	2713	3	NNC	ENSG00000156574.10	novel	2058	3	NA	NA	-806	405	at_least_one_novel_splicesite	FALSE	canonical	3	136	junction_2	212.5	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCTCTTAACAGCTTGA	-70442185	False	NA	-10	True	AATAAA	-18	NA	70442487	70431530	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_70433089_70435285_70435984_70442030
transcript_24258.nnic	chr10	-	1990	3	NNC	ENSG00000156574.10	novel	2058	3	NA	NA	-869	-381	at_least_one_novel_splicesite	FALSE	canonical	3	136	junction_2	212.5	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCCTGGGCCAGCTGGTG	-70442248	True	NA	-11	True	AATAAA	-13	NA	70442550	70432316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_70433089_70435285_70435984_70442030
transcript_24260.nnic	chr10	-	1855	3	NNC	ENSG00000156574.10	novel	2058	3	NA	NA	-869	297	at_least_one_novel_splicesite	FALSE	canonical	3	136	junction_2	212.5	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCATTGCCTCAGGCTGGG	-70442248	True	NA	-6	True	ATTAAA	-14	NA	70442550	70432451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_70433089_70435285_70435984_70442030
transcript_24263.known	chr10	-	2058	3	FSM	ENSG00000156574.10	ENST00000287139.8	2058	3	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_2	106.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTGTAGACTGAATAGGA	-70436508	True	NA	NA	False	ATTAAA	-36	NA	70441681	70431935	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_70433089_70435285_70435984_70441474
transcript_24280.known	chr10	+	4610	20	FSM	ENSG00000107719.9	ENST00000263563.7	4610	20	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_1	30.2108013924759	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCACCTGGCTGCTAATAT	70474310	True	NA	3	True	ATTAAA	-16	NA	70478766	70568450	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_70479060_70525922_70526137_70529228_70529332_70529888_70530069_70531289_70531455_70532620_70532782_70532994_70533071_70533921_70534074_70534424_70534525_70534738_70534844_70537810_70537907_70538279_70538409_70538891_70539009_70539091_70539248_70539579_70539763_70541101_70541243_70541462_70541535_70547305_70547447_70564363_70564520_70566580
transcript_24282.nnic	chr10	+	3054	20	NNC	ENSG00000107719.9	novel	4610	20	NA	NA	0	54980	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_18	85.9131817141221	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTGTCTGCATACCTCA	70474310	True	NA	NA	False	AATAAA	-16	NA	70478766	70623430	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_70479060_70525922_70526137_70529228_70529332_70529888_70530069_70531289_70531455_70532620_70532782_70532994_70533071_70533921_70534074_70534424_70534525_70534738_70534844_70537810_70537907_70538279_70538409_70538891_70539009_70539091_70539248_70539579_70539763_70541101_70541243_70541462_70541535_70547305_70547447_70598887_70599085_70623157
transcript_24289.nnic	chr10	+	4434	19	NIC	ENSG00000107719.9	novel	4610	20	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_14	64.9061287981001	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCACCTGGCTGCTAATAT	70474303	True	NA	3	True	ATTAAA	-16	NA	70478759	70568450	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_70479060_70525922_70526137_70529228_70529332_70529888_70530069_70531289_70531455_70532620_70532782_70532994_70533071_70533921_70534074_70534424_70534525_70534738_70534844_70537810_70537907_70538279_70538409_70538891_70539009_70539091_70539248_70541101_70541243_70541462_70541535_70547305_70547447_70564363_70564520_70566580
transcript_24294.nnic	chr10	+	4414	19	NIC	ENSG00000107719.9	novel	4610	20	NA	NA	-18	0	combination_of_known_splicesites	TRUE	canonical	1	5	junction_1	67.364037737111	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCACCTGGCTGCTAATAT	70474292	True	NA	3	True	ATTAAA	-16	NA	70478748	70568450	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_70479060_70529228_70529332_70529888_70530069_70531289_70531455_70532620_70532782_70532994_70533071_70533921_70534074_70534424_70534525_70534738_70534844_70537810_70537907_70538279_70538409_70538891_70539009_70539091_70539248_70539579_70539763_70541101_70541243_70541462_70541535_70547305_70547447_70564363_70564520_70566580
transcript_243.known	SIRV7	-	949	5	FSM	SIRV7A	SIRV706	949	5	0	0	0	0	multi-exon	FALSE	canonical	3	3729	junction_1	1870.01983612474	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAGAGATCGACGAAGTT	NA	False	NA	NA	False	NA	NA	NA	147957	56031	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV7_-_56098_70883_70988_78841_78964_114680_114989_147608
transcript_24307.nnic	chr10	+	2975	8	NNC	ENSG00000107719.9	novel	4610	20	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	106.061206818689	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCACCTGGCTGCTAATAT	70474308	True	NA	3	True	ATTAAA	-16	NA	70478764	70568450	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_70479021_70539091_70539248_70539579_70539763_70541101_70541243_70541462_70541535_70547305_70547447_70564363_70564520_70566580
transcript_24309.known	chr10	-	2492	3	FSM	ENSG00000180644.8	ENST00000373209.2	2492	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCATGGTGGTGTTGTGG	NA	False	NA	NA	False	AATAAA	-17	NA	70602759	70597347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_70599182_70600363_70600907_70602644
transcript_24315.known	chr10	+	5778	15	FSM	ENSG00000166224.17	ENST00000373202.8	5778	15	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_8	12.2865448224254	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGAAAGTGTTACCTGT	70809427	True	NA	135	True	AATAAA	-25	NA	70815947	70881184	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_70816127_70816810_70816881_70844472_70844639_70851142_70851211_70854707_70854856_70857613_70857691_70859370_70859500_70868344_70868434_70869791_70869898_70871047_70871147_70871836_70871987_70873350_70873590_70875401_70875549_70876540_70876662_70877194
transcript_24328.known	chr10	-	732	4	FSM	ENSG00000166228.9	ENST00000493228.1	732	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	165.984604373083	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCTTCCGGGGGAAGGG	-70888232	False	3951	NA	False	NA	NA	NA	70888254	70883931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_70884049_70885151_70885233_70885797_70885930_70887852
transcript_24329.known	chr10	-	787	4	FSM	ENSG00000166228.9	ENST00000299299.4	787	4	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_3	57.1858568373529	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGGCTCTAGAAACTTC	-70884614	True	NA	-13	True	AATAAA	-18	NA	70888565	70883509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_70884049_70885151_70885233_70885797_70885930_70888530
transcript_24330.known	chr10	-	389	3	FSM	ENSG00000166228.9	ENST00000493961.5	389	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	163	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGATGGTCTCTTCAGTT	-70885877	False	90	NA	False	AATACA	-35	NA	70885899	70882279	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_70882486_70885151_70885233_70885797
transcript_24346.known	chr10	+	6841	17	FSM	ENSG00000107731.12	ENST00000335350.10	6841	17	0	0	0	0	multi-exon	TRUE	canonical	3	109	junction_7	15.8674933039217	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGGTTGCATTTGGCTGT	71209929	True	NA	14	True	AATAAA	-24	NA	71212569	71302864	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_71213065_71279820_71280046_71284719_71284864_71285325_71285430_71286688_71286870_71287597_71287766_71288567_71288733_71288957_71288991_71290914_71291110_71291431_71291822_71292466_71292555_71293404_71293574_71293699_71293934_71295810_71295961_71296577_71296743_71297908_71298091_71299111
transcript_24349.nnic	chr10	+	3543	17	NNC	ENSG00000107731.12	novel	6841	17	NA	NA	66143	-2919	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	35.2521608380252	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAACACAAAAAAAATAGAAA	71278914	False	NA	NA	False	AAAAAG	-12	NA	71279069	71299945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_71279186_71279820_71280046_71284719_71284864_71285325_71285430_71286688_71286870_71287597_71287766_71288567_71288733_71288957_71288991_71290914_71291110_71291431_71291822_71292466_71292555_71293404_71293574_71293699_71293934_71295810_71295961_71296577_71296743_71297908_71298091_71299111
transcript_24351.known	chr10	+	6451	16	FSM	ENSG00000107731.12	ENST00000373192.4	6451	16	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	32.9926591161664	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGGTTGCATTTGGCTGT	71212873	False	NA	14	True	AATAAA	-24	NA	71212926	71302864	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_71213065_71279820_71280046_71284719_71284864_71285325_71285430_71286688_71286870_71287597_71287766_71288567_71288733_71290914_71291110_71291431_71291822_71292466_71292555_71293404_71293574_71293699_71293934_71295810_71295961_71296577_71296743_71297908_71298091_71299111
transcript_24363.known	chr10	-	647	2	FSM	ENSG00000237512.7	ENST00000447119.3	717	2	66	4	66	0	multi-exon	FALSE	canonical	3	34	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCACTTGTTTGGTTTCATT	NA	False	NA	-3	True	AAGAAA	-16	NA	71218228	71217223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_71217636_71217993
transcript_24364.known	chr10	+	2451	7	FSM	ENSG00000198246.9	ENST00000647524.1	2451	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	61.7479194431323	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTCAAGGGCGTAATAAAT	71318325	True	NA	-20	True	NA	NA	NA	71319281	71363351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_71319311_71322755_71323055_71344208_71344292_71351561_71351789_71352566_71352819_71356080_71356244_71361953
transcript_24366.known	chr10	+	2496	7	FSM	ENSG00000198246.9	ENST00000643619.1	2496	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	66.902084338897	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCGTAATAAATACTTGCGT	71318709	False	NA	-12	True	NA	NA	NA	71319665	71363359	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_71319732_71322755_71323055_71344208_71344292_71351561_71351789_71352566_71352819_71356080_71356244_71361953
transcript_24368.known	chr10	+	2256	6	FSM	ENSG00000198246.9	ENST00000373189.6	2256	6	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	23.9382539045771	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGCCTCATTGATGTCT	71318302	True	NA	14	True	AATAAA	-16	NA	71319258	71363385	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_71319311_71322755_71323055_71344208_71344292_71351561_71351789_71356080_71356244_71361953
transcript_24369.known	chr10	+	2392	6	FSM	ENSG00000198246.9	ENST00000643752.1	2392	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	56.9371583414557	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCGGGAGGCTGAGTCAG	71318308	True	NA	NA	False	AATACA	-44	NA	71319264	71365118	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_71319311_71322755_71323055_71344208_71344292_71356080_71356244_71361953_71363082_71364445
transcript_2437.nic	chr1	+	6075	21	NIC	ENSG00000054523.19	novel	7800	21	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_12	38.8384796303872	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	10202996	True	NA	NA	False	NA	NA	NA	10210532	10306757	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_10210879_10232249_10232435_10256246_10256324_10258492_10258673_10261904_10261971_10267379_10267559_10268151_10268264_10271501_10271580_10272240_10272307_10275427_10275504_10276320_10276400_10277985_10278129_10282321_10282534_10291081_10291162_10292046_10292123_10295085_10295166_10295659_10295767_10296581_10296666_10296896_10297078_10297173_10297247_10303162
transcript_24371.known	chr10	+	2621	6	FSM	ENSG00000198246.9	ENST00000479577.2	2621	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	51.9499759383967	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTCAAGGGCGTAATAAATA	71318325	True	NA	-19	True	NA	NA	NA	71319281	71363352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_71319732_71322755_71323055_71344208_71344292_71351561_71351789_71356080_71356244_71361953
transcript_24375.known	chr10	+	2136	5	FSM	ENSG00000198246.9	ENST00000644591.1	2136	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	54.9499772520426	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTCAAGGGCGTAATAAAT	71318305	True	NA	-20	True	NA	NA	NA	71319261	71363351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_71319311_71322755_71323055_71351561_71351789_71356080_71356244_71361953
transcript_24377.known	chr10	+	1927	4	FSM	ENSG00000198246.9	ENST00000644088.1	1927	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	53.9032054293208	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCATTGATGTCTCTGTT	71318326	True	NA	19	True	AATAAA	-21	NA	71319282	71363390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_71319311_71322755_71323055_71356080_71356244_71361953
transcript_24378.known	chr10	-	4794	2	FSM	ENSG00000214688.6	ENST00000441508.4	4794	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTAATGGTCATTCTTTA	-71719737	False	NA	1	True	AATAAA	-24	NA	71719778	71711700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_71716343_71719626
transcript_24379.known	chr10	-	4714	7	FSM	ENSG00000107738.20	ENST00000394957.8	4714	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.67497927018681	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGGTCTCCTGCTTCCT	-71773490	True	NA	NA	False	AGTAAA	-20	NA	71773520	71747555	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_71751291_71751667_71751862_71752974_71753003_71755358_71755467_71760867_71760925_71761597_71762027_71773357
transcript_2439.known	chr1	+	7800	21	FSM	ENSG00000054523.19	ENST00000377093.9	7800	21	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_20	28.5101297787295	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGATTTCTCTCTATG	10203033	True	NA	32	True	AATAAA	-36	NA	10210569	10308597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_10210879_10232249_10232435_10256246_10256324_10258492_10258673_10261904_10261971_10267379_10267559_10268151_10268264_10271501_10271580_10272240_10272307_10275427_10275504_10276320_10276400_10277985_10278129_10282399_10282534_10291081_10291162_10292046_10292123_10295085_10295166_10295659_10295767_10296581_10296666_10296896_10297078_10297173_10297247_10303162
transcript_24400.known	chr10	-	2748	14	FSM	ENSG00000197746.15	ENST00000394936.8	2748	14	0	0	0	0	multi-exon	FALSE	canonical	3	4354	junction_3	417.389945810755	5538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGCCTAATGTTTCTGT	-71828404	True	NA	-21	True	AATAAA	-16	NA	71851251	71816297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_71817477_71818616_71818725_71819030_71819112_71819464_71819623_71819713_71819901_71820239_71820336_71821875_71822008_71825836_71825894_71828013_71828158_71828876_71829078_71831125_71831252_71831845_71831921_71834371_71834506_71851181
transcript_24452.known	chr10	-	2830	14	NNC	ENSG00000197746.15	novel	2748	14	NA	NA	-74	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1393.18805146526	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGGCCTAATGTTTCTG	-71828478	True	NA	-22	True	AATAAA	-15	NA	71851325	71816298	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_71817477_71818616_71818725_71819030_71819112_71819464_71819623_71819713_71819901_71820239_71820336_71821875_71822017_71825836_71825894_71828013_71828158_71828876_71829078_71831125_71831252_71831845_71831921_71834371_71834506_71851181
transcript_24453.known	chr10	+	6934	3	FSM	ENSG00000122863.6	ENST00000373115.5	6934	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCAGCGTGTCTCTGCCT	71964295	False	NA	12	True	ATTAAA	-25	NA	71964394	72013558	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_71964695_72005735_72005983_72007171
transcript_24454.known	chr10	-	5224	11	FSM	ENSG00000107742.14	ENST00000373109.7	5224	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	7.34846922834953	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTGGCAATACTCTGAT	-72088470	True	NA	-2	True	AATAAA	-17	NA	72088551	72059033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_72062906_72063024_72063163_72064177_72064241_72066901_72067121_72067612_72067733_72068186_72068302_72070311_72070427_72072143_72072259_72072502_72072549_72072901_72072911_72088139
transcript_24457.known	chr10	-	1824	10	NNC	ENSG00000107742.14	novel	5224	11	NA	NA	-5	399	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	6.25586144900411	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAATTGACAGGTCAAAAT	-72088516	False	NA	-25	True	AATACA	-14	NA	72088526	72062405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_72062906_72063024_72063163_72064177_72064241_72066901_72067121_72067612_72067733_72068186_72068302_72070311_72070427_72072143_72072259_72072502_72072551_72088135
transcript_24464.nic	chr10	-	2133	10	NIC	ENSG00000138303.18	novel	2167	11	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_9	34.0808769376539	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGCTTGGTCTATCATT	-72214088	False	NA	-13	True	ATTAAA	-15	NA	72215995	72096521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_72097451_72128081_72128168_72133056_72133182_72152868_72152989_72161537_72161675_72196810_72196990_72203426_72203525_72210731_72210832_72213186_72213332_72215781
transcript_24465.known	chr10	-	2479	10	FSM	ENSG00000138303.18	ENST00000672957.1	2479	10	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	12.9022918817731	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTTAGTATGATCACA	-72214369	True	NA	-15	True	AATAAA	-14	NA	72216276	72096031	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_72097451_72128081_72128168_72133056_72133182_72152868_72152989_72161537_72161675_72196810_72196990_72203426_72203525_72210731_72210832_72213186_72213332_72216206
transcript_2447.nic	chr1	+	2494	20	NIC	ENSG00000054523.19	novel	10855	49	NA	NA	-94	4869	combination_of_known_junctions	FALSE	canonical	3	41	junction_12	36.7785918700621	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGAAGGAAGAAGCAGATC	NA	False	NA	NA	False	NA	NA	NA	10210475	10297203	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_10210879_10232249_10232435_10256246_10256324_10258492_10258673_10261904_10261971_10267379_10267559_10268151_10268264_10271501_10271580_10272240_10272307_10275427_10275504_10276320_10276400_10277985_10278129_10282321_10282534_10291081_10291162_10292046_10292123_10295085_10295166_10295659_10295767_10296581_10296666_10296896_10297078_10297173
transcript_24470.nic	chr10	-	1961	9	NIC	ENSG00000138303.18	novel	2479	10	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	46.3220722226457	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTGGTCTATCATTTT	NA	False	NA	-11	True	ATTAAA	-17	NA	72216332	72096519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_72097451_72133056_72133182_72152868_72152989_72161537_72161675_72196810_72196990_72203426_72203525_72210731_72210832_72213186_72213332_72216206
transcript_24473.known	chr10	-	1349	9	FSM	ENSG00000138303.18	ENST00000672940.1	1349	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	43.876068363061	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTGCACAGTTCAGT	-72214370	True	NA	-2	True	CATAAA	-19	NA	72216277	72097042	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_72097451_72128081_72128168_72133056_72133182_72161537_72161675_72196810_72196990_72203426_72203525_72210731_72210832_72213186_72213332_72216206
transcript_24475.known	chr10	-	1816	8	FSM	ENSG00000138303.18	ENST00000317168.11	1816	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	61.4654374425172	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTGGTCTATCATTTT	-72214400	False	NA	-11	True	ATTAAA	-17	NA	72216307	72096519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_72097451_72133056_72133182_72161537_72161675_72196810_72196990_72203426_72203525_72210731_72210832_72213186_72213332_72216206
transcript_2448.nic	chr1	+	2416	20	ISM	ENSG00000054523.19	ENST00000377093.9	7800	21	-94	11394	-94	4869	5prime_fragment	FALSE	canonical	3	115	junction_12	24.3513069379138	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGAAGGAAGAAGCAGATC	NA	False	NA	NA	False	NA	NA	NA	10210475	10297203	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_10210879_10232249_10232435_10256246_10256324_10258492_10258673_10261904_10261971_10267379_10267559_10268151_10268264_10271501_10271580_10272240_10272307_10275427_10275504_10276320_10276400_10277985_10278129_10282399_10282534_10291081_10291162_10292046_10292123_10295085_10295166_10295659_10295767_10296581_10296666_10296896_10297078_10297173
transcript_24485.known	chr10	+	3567	5	FSM	ENSG00000166295.9	ENST00000621663.4	3567	5	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_2	371.520776673391	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCACCTTTCTCATTGATC	72208250	True	NA	4	True	ATTAAA	-16	NA	72215999	72235858	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_72216139_72220053_72220380_72223887_72224057_72230365_72230441_72233000
transcript_24490.nic	chr10	+	627	4	NIC	ENSG00000166295.9	novel	3231	4	NA	NA	-18	-323	combination_of_known_junctions	FALSE	canonical	3	176	junction_1	394.659628315619	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGGAATGTTTTGTTTAT	72208232	True	NA	26	True	NA	NA	NA	72215981	72233292	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_72216073_72223887_72224057_72230365_72230441_72233000
transcript_24491.nic	chr10	+	1095	4	NIC	ENSG00000166295.9	novel	3231	4	NA	NA	-18	-69	combination_of_known_junctions	FALSE	canonical	3	176	junction_1	394.659628315619	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGAGTTCTTCTCATTGG	72208232	True	NA	23	True	AATAAA	-32	NA	72215981	72233760	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_72216073_72223887_72224057_72230365_72230441_72233000
transcript_24492.nic	chr10	+	1164	4	NIC	ENSG00000166295.9	novel	3231	4	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	176	junction_1	394.659628315619	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCATTATCCTTTCA	72208232	True	NA	20	True	AATAAA	-21	NA	72215981	72233829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_72216073_72223887_72224057_72230365_72230441_72233000
transcript_24493.known	chr10	+	3231	4	FSM	ENSG00000166295.9	ENST00000299381.5	3231	4	0	0	0	0	multi-exon	FALSE	canonical	3	551	junction_1	226.582337254155	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTTTCTCATTGATCAC	72208262	True	NA	6	True	ATTAAA	-18	NA	72216011	72235860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_72216139_72223887_72224057_72230365_72230441_72233000
transcript_24500.nnic	chr10	+	520	3	NIC	ENSG00000166295.9	novel	3231	4	NA	NA	-14	-323	combination_of_known_splicesites	FALSE	canonical	3	185	junction_1	459	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGGAATGTTTTGTTTAT	72208236	True	NA	26	True	NA	NA	NA	72215985	72233292	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_72216139_72230365_72230441_72233000
transcript_24502.nnic	chr10	+	1057	3	NIC	ENSG00000166295.9	novel	3231	4	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	185	junction_1	459	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCATTATCCTTTCA	72208236	True	NA	20	True	AATAAA	-21	NA	72215985	72233829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_72216139_72230365_72230441_72233000
transcript_24504.known	chr10	+	734	3	FSM	ENSG00000166295.9	ENST00000478193.5	734	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	515	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATTTTTAGACATCAATT	72208279	True	NA	NA	False	TTTAAA	-16	NA	72216028	72233615	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_72216073_72230365_72230441_72233000
transcript_2451.nic	chr1	+	2429	19	NIC	ENSG00000054523.19	novel	10855	49	NA	NA	-94	4708	combination_of_known_junctions	FALSE	canonical	3	41	junction_12	36.85557397916	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGGAATTGATATGAAACA	NA	False	NA	-18	True	NA	NA	NA	10210475	10297042	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_10210879_10232249_10232435_10256246_10256324_10258492_10258673_10261904_10261971_10267379_10267559_10268151_10268264_10271501_10271580_10272240_10272307_10275427_10275504_10276320_10276400_10277985_10278129_10282321_10282534_10291081_10291162_10292046_10292123_10295085_10295166_10295659_10295767_10296581_10296666_10296896
transcript_24511.nnic	chr10	+	371	2	NIC	ENSG00000166295.9	novel	734	3	NA	NA	-8	-13272	combination_of_known_splicesites	FALSE	canonical	3	74	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAGAAAAGAAAACATAA	72208242	True	NA	NA	False	NA	NA	NA	72215991	72220343	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_72216073_72220053
transcript_24513.known	chr10	+	1744	3	FSM	ENSG00000168209.6	ENST00000307365.4	1744	3	0	0	0	0	multi-exon	FALSE	canonical	3	1075	junction_1	5	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTTGAGTCTCTCATCA	72269623	True	NA	8	True	AATAAA	-17	NA	72273923	72276036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_72274061_72274156_72274422_72274694
transcript_24514.known	chr10	+	1966	2	FSM	ENSG00000168209.6	ENST00000471240.2	1966	2	0	0	0	0	multi-exon	FALSE	canonical	3	1075	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTAAGACCTATGCAATAT	72269619	True	NA	1	True	AATACA	-14	NA	72273919	72275981	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_72274061_72274156
transcript_24516.known	chr10	+	1830	2	FSM	ENSG00000168209.6	ENST00000473155.2	1830	2	0	0	0	0	multi-exon	FALSE	canonical	3	1085	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTAAAACAGTTGGTTGAG	72269623	True	NA	-2	True	AATAAA	-7	NA	72273923	72276026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_72274422_72274694
transcript_24518.known	chr10	-	2935	9	FSM	ENSG00000148719.16	ENST00000444643.8	2935	9	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	40.3322141718007	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGTTAATATATGTTTA	-72352243	True	NA	32	True	NA	NA	NA	72354919	72332862	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_72334618_72335779_72335932_72336523_72336697_72338201_72338312_72340788_72340869_72340984_72341171_72343365_72343512_72344949_72345128_72354764
transcript_24519.nic	chr10	-	2942	9	NIC	ENSG00000148719.16	novel	2935	9	NA	NA	-61	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	45.4278273748591	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGTTAATATATGTTTA	-72352304	True	NA	32	True	NA	NA	NA	72354980	72332862	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_72334618_72335833_72335932_72336523_72336697_72338201_72338312_72340788_72340869_72340984_72341171_72343365_72343512_72344949_72345128_72354764
transcript_2452.nic	chr1	+	2351	19	ISM	ENSG00000054523.19	ENST00000377093.9	7800	21	-94	11555	-94	4708	5prime_fragment	FALSE	canonical	3	115	junction_12	23.9015470339743	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGGAATTGATATGAAACA	NA	False	NA	-18	True	NA	NA	NA	10210475	10297042	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_10210879_10232249_10232435_10256246_10256324_10258492_10258673_10261904_10261971_10267379_10267559_10268151_10268264_10271501_10271580_10272240_10272307_10275427_10275504_10276320_10276400_10277985_10278129_10282399_10282534_10291081_10291162_10292046_10292123_10295085_10295166_10295659_10295767_10296581_10296666_10296896
transcript_24523.nic	chr10	-	1313	9	NIC	ENSG00000148719.16	novel	3198	9	NA	NA	-74	18	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	45.4278273748591	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGCACAGCTGCCCTCTC	-72352317	True	NA	-8	True	ATTAAA	-19	NA	72354993	72334504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_72334618_72335833_72335932_72336523_72336697_72338201_72338312_72340788_72340869_72340984_72341171_72343365_72343512_72344949_72345128_72354764
transcript_24525.known	chr10	-	4360	8	FSM	ENSG00000148719.16	ENST00000338820.7	4360	8	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_2	12.3337929680854	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTGGGTCTGCATTGAG	-72355135	True	NA	0	True	AATATA	-20	NA	72355149	72332829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_72335932_72336523_72336697_72338201_72338312_72340788_72340869_72340984_72341171_72343365_72343512_72344949_72345128_72354764
transcript_24535.known	chr10	-	2357	12	FSM	ENSG00000107745.20	ENST00000361114.10	2357	12	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_9	26.0609584190415	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTCTCCTTTATTTTAG	-72619676	True	NA	-14	True	AATAAA	-14	NA	72626079	72367339	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_72368356_72375782_72375873_72407928_72408038_72423233_72423372_72475099_72475298_72477173_72477257_72508154_72508270_72533745_72533790_72551178_72551342_72562894_72563064_72566632_72566795_72626009
transcript_24544.known	chr10	-	580	3	FSM	ENSG00000107745.20	ENST00000604025.1	580	3	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_1	18	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGATCTAGGACCAATAA	-72619671	True	NA	NA	False	NA	NA	NA	72626074	72562710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_72563064_72566632_72566795_72626009
transcript_24546.known	chr10	-	2488	12	NNC	ENSG00000107745.20	novel	2357	12	NA	NA	-60	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	76.4761076501826	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAGGGTCCTCTAGGCC	-72619788	True	NA	-1	True	AATAAA	-27	NA	72626191	72367326	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_72368356_72375782_72375873_72407928_72408038_72423233_72423372_72475099_72475298_72477173_72477257_72508154_72508272_72533741_72533790_72551178_72551342_72562894_72563064_72566632_72566795_72626009
transcript_24555.known	chr10	+	2949	8	FSM	ENSG00000156026.15	ENST00000373053.8	2937	8	-12	0	-12	0	multi-exon	FALSE	canonical	3	314	junction_7	25.3884113045978	231	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATAGCATCTCATTCTTTA	72687843	True	NA	11	True	AATAAA	-20	NA	72692130	72887694	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_72692302_72834358_72834429_72859176_72859348_72860422_72860528_72868702_72868864_72871376_72871581_72884265_72884383_72885744
transcript_24559.nnic	chr10	-	2868	16	NNC	ENSG00000122884.13	novel	2727	15	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_15	119.782840544416	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTTCTGTGTGGTG	-73096788	False	NA	-13	True	TTTAAA	-5	NA	73096898	73007216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_73008293_73009806_73009904_73010968_73011038_73014223_73014290_73016845_73016896_73030266_73030371_73043886_73043958_73046924_73047102_73051052_73051250_73053350_73053591_73068845_73068984_73072028_73072181_73073730_73073828_73074807_73074916_73077720_73077814_73096765
transcript_24563.known	chr10	-	2727	15	FSM	ENSG00000122884.13	ENST00000373008.6	2727	15	0	0	0	0	multi-exon	TRUE	canonical	3	314	junction_7	30.5651695862584	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTTCTGTGTGGTG	-73092877	True	NA	-13	True	TTTAAA	-5	NA	73096850	73007216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73008293_73009806_73009904_73010968_73011038_73014223_73014290_73016845_73016896_73030266_73030371_73043886_73043958_73046924_73047102_73051052_73051250_73053350_73053591_73068845_73068984_73072028_73072181_73073730_73073828_73074807_73074916_73096765
transcript_24566.known	chr10	-	2727	15	FSM	ENSG00000122884.13	ENST00000307116.6	2727	15	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_6	104.958227842493	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTTCTGTGTGGTG	-73092877	True	NA	-13	True	TTTAAA	-5	NA	73096850	73007216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73008293_73009806_73009904_73010968_73011038_73014223_73014290_73016845_73016896_73030266_73030371_73044980_73045052_73046924_73047102_73051052_73051250_73053350_73053591_73068845_73068984_73072028_73072181_73073730_73073828_73074807_73074916_73096765
transcript_24570.known	chr10	-	2790	14	FSM	ENSG00000122884.13	ENST00000440381.5	2790	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	101.796525207783	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAATGTTTGTTTTCTG	-73096864	False	NA	-20	True	NA	NA	NA	73096974	73007223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73008293_73009806_73009904_73010968_73011038_73014223_73014290_73030270_73030371_73043886_73043958_73046924_73047102_73051052_73051250_73053350_73053591_73068845_73068984_73072028_73072181_73073730_73073828_73074807_73074916_73096765
transcript_24574.nic	chr10	-	1207	7	ISM	ENSG00000122884.13	ENST00000440381.5	2790	14	-138	43901	-138	-41485	5prime_fragment	FALSE	canonical	3	353	junction_4	18.9032625050104	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTTGCTGTGGATTACCT	NA	False	NA	NA	False	AAGAAA	-4	NA	73097112	73051124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_73051250_73053350_73053591_73068845_73068984_73072028_73072181_73073730_73073828_73074807_73074916_73096765
transcript_24576.known	chr10	-	2844	15	FSM	ENSG00000122884.13	ENST00000263556.3	2844	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	99.9639986215445	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAATGTTTGTTTTCTG	-73096864	False	NA	-20	True	NA	NA	NA	73096974	73007223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73008293_73009806_73009904_73010968_73011038_73014223_73014290_73016845_73016900_73030270_73030371_73043886_73043958_73046924_73047102_73051052_73051250_73053350_73053591_73068845_73068984_73072028_73072181_73073730_73073828_73074807_73074916_73096765
transcript_24577.known	chr10	-	2743	15	FSM	ENSG00000122884.13	ENST00000394890.7	2743	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	135.323139339938	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTTCTGTGTGGTG	-73092893	True	NA	-13	True	TTTAAA	-5	NA	73096866	73007216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73008293_73009806_73009904_73010968_73011038_73014223_73014290_73016845_73016900_73030270_73030371_73044980_73045052_73046924_73047102_73051052_73051250_73053350_73053591_73068845_73068984_73072028_73072181_73073730_73073828_73074807_73074916_73096765
transcript_24581.known	chr10	-	3006	14	FSM	ENSG00000122882.11	ENST00000372979.9	3006	14	0	0	0	0	multi-exon	TRUE	canonical	3	423	junction_11	39.8272898619964	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTCTTTACAGACAGCTC	-73163110	True	NA	-41	True	ATTAAA	-13	NA	73168008	73133667	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73134814_73136703_73136919_73138002_73138071_73139308_73139496_73139630_73139738_73146275_73146362_73148275_73148405_73152292_73152422_73154255_73154449_73156274_73156454_73156567_73156656_73160433_73160552_73163732_73163951_73167865
transcript_24593.known	chr10	-	1679	12	FSM	ENSG00000122882.11	ENST00000484976.6	1679	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	187.677717430266	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTAGTTTAGATTACTCA	-73163050	True	NA	-11	True	AATAAA	-22	NA	73167948	73134523	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73134814_73136703_73136919_73138002_73138071_73139308_73139496_73139630_73139738_73146275_73146362_73148275_73148405_73152292_73152422_73156274_73156454_73156567_73156656_73160433_73160552_73167865
transcript_24595.known	chr10	+	2101	9	FSM	ENSG00000166321.14	ENST00000357321.9	2101	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	4.48434777866302	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTTCTGATGTCTTTT	73110173	True	NA	NA	False	AATAAA	-14	NA	73110454	73131823	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_73110568_73114356_73114449_73120017_73120158_73122174_73122310_73124213_73124321_73125117_73125244_73125397_73125510_73126672_73126828_73130702
transcript_24598.known	chr10	+	1919	8	FSM	ENSG00000166321.14	ENST00000372997.3	1919	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	4.80645824036021	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGATGTCTTTTTCTGT	73110248	True	NA	NA	False	AATAAA	-19	NA	73110529	73131828	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_73110568_73114356_73114449_73120017_73120158_73122174_73122310_73124213_73124321_73125117_73125244_73126672_73126828_73130702
transcript_24604.known	chr10	-	884	6	FSM	ENSG00000122882.11	ENST00000453402.5	884	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	167.579712375932	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCCTCCATCTGATCCC	NA	False	NA	NA	False	NA	NA	NA	73168095	73152345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73152422_73154255_73154449_73156274_73156454_73156567_73156656_73160433_73160552_73167865
transcript_24606.known	chr10	-	2295	5	FSM	ENSG00000213551.7	ENST00000372950.6	2295	5	0	0	0	0	multi-exon	FALSE	canonical	3	486	junction_4	17.8115131305569	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGCTGCATTCATGAAT	-73224979	False	22276	-3	True	AATAAA	-19	NA	73247255	73241953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73243520_73243842_73243930_73245921_73246177_73246687_73246829_73247009
transcript_24609.nnic	chr10	-	1855	4	NNC	ENSG00000182180.14	novel	2579	3	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	676.039610936782	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCCGTAGCAAATGTATA	NA	False	NA	-25	True	AATAAA	-26	NA	73252698	73248842	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_73249206_73249989_73250992_73251762_73252024_73252469
transcript_24612.known	chr10	+	548	3	FSM	ENSG00000227540.1	ENST00000457758.1	548	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTGTTCACATTATTA	73252252	False	NA	2	True	ATTAAA	-20	NA	73253031	73254344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_73253064_73253190_73253255_73253892
transcript_24614.known	chr10	-	866	3	FSM	ENSG00000182180.14	ENST00000372940.3	866	3	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	688	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTACATAATTTGGCTA	-73230417	True	NA	-120	True	AAAAAG	-3	NA	73252693	73248937	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73249319_73251762_73252024_73252469
transcript_24616.known	chr10	-	2579	3	FSM	ENSG00000182180.14	ENST00000372945.8	2579	3	0	0	0	0	multi-exon	FALSE	canonical	3	1317	junction_1	109.5	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAATTTTCCGTAGCAAA	-73230368	True	NA	-31	True	AATAAA	-20	NA	73252644	73248848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73250992_73251762_73252024_73252469
transcript_24619.known	chr10	-	612	3	FSM	ENSG00000182180.14	ENST00000473427.1	612	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	657	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTGCCCTTGCTCTTCT	-73230358	True	NA	31	True	AATAAA	-11	NA	73252634	73250743	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73250992_73251762_73252024_73252531
transcript_24620.known	chr10	+	762	2	FSM	ENSG00000227540.1	ENST00000457147.1	762	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTCACATTATTACCAGC	73252011	True	NA	7	True	ATTAAA	-25	NA	73252790	73254349	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_73253096_73253892
transcript_24632.known	chr10	-	2443	13	FSM	ENSG00000138279.16	ENST00000372921.10	2443	13	0	0	0	0	multi-exon	FALSE	canonical	3	504	junction_12	126.357957142925	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTTCTGTGTCTGGCT	-73405624	True	NA	-5	True	TATAAA	-13	NA	73414058	73375100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73376218_73378910_73379024_73379878_73379955_73380030_73380202_73383174_73383346_73383576_73383691_73387688_73387784_73388311_73388415_73396518_73396584_73397163_73397275_73398180_73398386_73400802_73400858_73414011
transcript_24637.nic	chr10	-	2063	12	NIC	ENSG00000138279.16	novel	2174	14	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_11	260.900981818869	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGGTGTACAATATGGT	-73405643	True	NA	-26	True	AATAAA	-13	NA	73414077	73375444	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_73376218_73378910_73379024_73379878_73379955_73380030_73380202_73383174_73383346_73383576_73383691_73387688_73387784_73388311_73388415_73396518_73396584_73397163_73397275_73398180_73398386_73414011
transcript_2464.known	chr1	+	2268	13	FSM	ENSG00000142657.21	ENST00000270776.13	2268	13	0	0	0	0	multi-exon	FALSE	canonical	2	1023	junction_6	184.027681341694	1416	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGTCTGATTTATTTCC	10377630	True	NA	18	True	ATTAAA	-18	NA	10399063	10420511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_10399126_10399628_10399705_10400392_10400573_10403070_10403137_10404160_10404280_10408070_10408141_10411417_10411553_10413061_10413252_10416986_10417118_10417375_10417510_10418825_10418926_10419416_10419540_10419629
transcript_24651.known	chr10	-	3519	14	FSM	ENSG00000107758.16	ENST00000360663.10	3519	14	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	16.6832658957036	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCATTTTCCTATCATTCC	-73495965	True	NA	NA	False	AAGAAA	-15	NA	73496024	73436432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73438421_73439871_73439902_73444724_73444823_73446491_73446574_73454411_73454490_73467552_73467679_73470686_73470782_73470886_73470965_73471069_73471210_73471467_73471614_73474918_73475031_73478498_73478624_73479316_73479518_73495804
transcript_24652.known	chr10	-	3149	14	FSM	ENSG00000107758.16	ENST00000394829.6	3149	14	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	16.9408997057487	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGTGTTGGGTTTTAT	-73495965	True	NA	-2	True	AATAAA	-25	NA	73496024	73436805	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73438421_73439871_73439902_73444724_73444823_73446491_73446577_73454411_73454490_73467552_73467679_73470686_73470782_73470886_73470965_73471069_73471210_73471467_73471614_73474918_73475031_73478498_73478624_73479316_73479518_73495804
transcript_24653.known	chr10	-	3119	13	FSM	ENSG00000107758.16	ENST00000394828.6	3119	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	19.6869598691339	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGTGTTGGGTTTTAT	-73495965	True	NA	-2	True	AATAAA	-25	NA	73496024	73436805	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73438421_73444724_73444823_73446491_73446577_73454411_73454490_73467552_73467679_73470686_73470782_73470886_73470965_73471069_73471210_73471467_73471614_73474918_73475031_73478498_73478624_73479316_73479518_73495804
transcript_24657.known	chr10	-	2418	12	FSM	ENSG00000107758.16	ENST00000342558.3	2418	12	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	15.0684389118339	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGCTCATTGAATATTTT	-73495937	True	NA	2	True	AATAAA	-29	NA	73495996	73443779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73444823_73446491_73446574_73454411_73454490_73467552_73467679_73470686_73470782_73470886_73470965_73471069_73471210_73471467_73471614_73474918_73475031_73478498_73478624_73479316_73479518_73495804
transcript_24661.nnic	chr10	-	1485	7	Fusion	ENSG00000177791.12_ENSG00000166317.12	novel	1300	6	NA	NA	3543	0	multi-exon	FALSE	canonical	3	21	junction_6	6.3355259362494	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAACAATGCACAGAGACTA	-73647174	True	NA	NA	False	AATGAA	-43	NA	73647486	73631611	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr10_-_73632162_73633899_73634066_73634483_73634734_73637743_73637923_73639944_73640036_73641410_73641513_73647339
transcript_24664.nnic	chr10	-	1383	6	Fusion	ENSG00000177791.12_ENSG00000166317.12	novel	1300	6	NA	NA	3543	0	multi-exon	FALSE	canonical	2	4	junction_5	11.6516093309036	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAACAATGCACAGAGACTA	-73647174	True	NA	NA	False	AATGAA	-43	NA	73647486	73631611	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr10_-_73632162_73633899_73634066_73634483_73634734_73637743_73637923_73639944_73640036_73647339
transcript_24672.known	chr10	-	1716	10	FSM	ENSG00000242338.6	ENST00000584747.5	1716	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	21.4941852602047	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCACAGTGAAATAGATGT	-73729333	True	NA	NA	False	AATAAA	-18	NA	73730469	73715842	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73716181_73718014_73718166_73719159_73719300_73720537_73720660_73721361_73721505_73722388_73722578_73725960_73726041_73727292_73727483_73728378_73728588_73730315
transcript_24681.nnic	chr10	+	956	3	FSM	ENSG00000250959.3	ENST00000686626.1	897	3	-62	3	-39	-3	multi-exon	FALSE	canonical	2	6	junction_2	3	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCTTTGGGTCCGCACT	73730512	False	NA	5	True	AATAAA	-13	NA	73730522	73737784	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_73730874_73731187_73731256_73737247
transcript_24682.known	chr10	+	896	2	FSM	ENSG00000250959.3	ENST00000507952.1	896	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACCCCTCCTCACGTCAG	73730253	True	NA	NA	False	NA	NA	NA	73730561	73731771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_73730874_73731187
transcript_24683.known	chr10	-	1236	1	FSM	ENSG00000279088.1	ENST00000625041.1	1236	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTGTAATAATAAAACTCT	-73744215	False	NA	-34	True	NA	NA	NA	73744230	73742994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73743000_73744200
transcript_24686.known	chr10	+	4513	24	FSM	ENSG00000176986.16	ENST00000339365.2	4513	24	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	125.304755151255	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTAGCCTCATCTTTACT	73736166	True	NA	13	True	AATAAA	-17	NA	73744390	73772161	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_73744438_73746629_73746717_73746804_73747005_73751107_73751244_73759621_73759795_73760017_73760387_73760712_73760850_73763489_73763602_73763855_73763984_73765450_73765590_73765799_73765916_73766085_73766211_73766349_73766542_73766759_73766854_73767053_73767171_73767836_73768008_73768809_73768907_73769006_73769153_73769346_73769486_73769614_73769734_73769835_73770016_73770279_73770472_73770708_73770799_73770954
transcript_24691.known	chr10	+	4445	23	FSM	ENSG00000176986.16	ENST00000345254.9	4445	23	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_1	42.3223560093459	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTAGCCTCATCTTTACT	73736147	True	NA	13	True	AATAAA	-17	NA	73744371	73772161	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_73744438_73746804_73747005_73751107_73751244_73759621_73759795_73760017_73760387_73760712_73760850_73763489_73763602_73763855_73763984_73765450_73765590_73765799_73765916_73766085_73766211_73766349_73766542_73766759_73766854_73767053_73767171_73767836_73768008_73768809_73768907_73769006_73769153_73769346_73769486_73769614_73769734_73769835_73770016_73770279_73770472_73770708_73770799_73770954
transcript_24694.known	chr10	+	4668	22	FSM	ENSG00000176986.16	ENST00000465076.5	4668	22	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_1	43.3183124149151	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATTAGCCTCATCTTTA	73736159	True	NA	11	True	AATAAA	-15	NA	73744383	73772159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_73744438_73746804_73747005_73751107_73751244_73759621_73759795_73760017_73760387_73760712_73760850_73763489_73763602_73763855_73763984_73765450_73765590_73765799_73765916_73766085_73766211_73766349_73766542_73766759_73766854_73767053_73767171_73767836_73768008_73768809_73768907_73769006_73769153_73769346_73769486_73769614_73769734_73769835_73770016_73770279_73770799_73770954
transcript_24703.nnic	chr10	+	2391	10	NIC	ENSG00000176986.16	novel	4513	24	NA	NA	-68	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	209.074917165246	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTAGCCTCATCTTTACT	NA	False	NA	13	True	AATAAA	-17	NA	73744303	73772161	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_73744438_73746629_73746717_73768809_73768907_73769006_73769153_73769346_73769486_73769614_73769734_73769835_73770016_73770279_73770472_73770708_73770799_73770954
transcript_24712.nnic	chr10	+	2562	4	NNC	ENSG00000196968.11	novel	2071	3	NA	NA	0	1106	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	16.8720676464584	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCCAGGAAAAAAAGTGCAAA	73771119	True	NA	NA	False	NA	NA	NA	73772290	73777325	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_73773042_73773189_73773816_73775540_73776343_73776942
transcript_24713.nnic	chr10	+	2726	4	NNC	ENSG00000196968.11	novel	2071	3	NA	NA	-46	1106	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	16.8720676464584	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCCAGGAAAAAAAGTGCAAA	NA	False	NA	NA	False	NA	NA	NA	73772229	73777325	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_73773042_73773189_73773816_73775540_73776434_73776930
transcript_24715.known	chr10	+	2175	3	FSM	ENSG00000196968.11	ENST00000394790.2	2175	3	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_2	13	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTCTATTTTACTTATT	73771119	True	NA	39	True	NA	NA	NA	73772290	73776216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_73773042_73773189_73773816_73775418
transcript_24718.known	chr10	+	2071	3	FSM	ENSG00000196968.11	ENST00000372841.8	2071	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	5.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTATTTTACTTATTTAT	73771104	True	NA	42	True	NA	NA	NA	73772275	73776219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_73773042_73773189_73773816_73775540
transcript_24723.known	chr10	+	2408	2	FSM	ENSG00000196968.11	ENST00000465695.1	2408	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGATGCTACTTCATTTT	73772364	False	NA	NA	False	AATAAA	-26	NA	73772563	73775123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_73773042_73773193
transcript_24727.known	chr10	+	850	3	FSM	ENSG00000172586.8	ENST00000372833.6	850	3	0	0	0	0	multi-exon	FALSE	canonical	3	1420	junction_1	43	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTCTGCAGATATGTTT	73766423	True	NA	12	True	AATAAA	-21	NA	73782047	73783652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_73782200_73782322_73782442_73783073
transcript_24728.known	chr10	+	1202	2	FSM	ENSG00000172586.8	ENST00000372837.3	1202	2	0	0	0	0	multi-exon	FALSE	canonical	3	1420	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGGCCTTTTGTTGTGA	73782035	False	NA	15	True	AATAAA	-14	NA	73782046	73783371	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_73782200_73782322
transcript_24733.known	chr10	+	6052	26	FSM	ENSG00000214655.11	ENST00000604729.6	6052	26	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_13	22.2485595039319	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGACCTGGGCCTTTCCCT	73784883	True	NA	17	True	TATAAA	-25	NA	73785605	73801793	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_73786087_73788669_73788824_73789095_73789191_73789366_73789540_73789716_73789825_73789955_73790038_73790171_73790293_73790974_73791177_73791323_73791500_73791858_73792853_73793587_73793720_73793864_73794045_73794146_73794331_73794540_73794640_73795538_73795664_73796773_73797015_73797112_73797272_73797376_73797606_73797780_73798071_73798229_73798454_73799001_73799491_73800010_73800171_73800295_73800473_73800639_73800760_73801016_73801196_73801315
transcript_24734.known	chr10	+	6004	26	FSM	ENSG00000214655.11	ENST00000605216.5	6004	26	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_13	23.1706711167372	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGACCTGGGCCTTTCCC	73784939	False	NA	16	True	TATAAA	-24	NA	73785661	73801792	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_73786087_73788669_73788824_73789095_73789191_73789366_73789540_73789716_73789825_73789955_73790038_73790171_73790293_73790974_73791177_73791323_73791500_73791858_73792853_73793587_73793720_73793864_73794045_73794146_73794331_73794555_73794640_73795538_73795664_73796773_73797015_73797112_73797272_73797376_73797606_73797780_73798071_73798229_73798454_73799001_73799491_73800010_73800195_73800295_73800473_73800639_73800760_73801016_73801196_73801315
transcript_24743.known	chr10	-	3758	15	FSM	ENSG00000166507.19	ENST00000309979.11	3758	15	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_10	11.3766678526083	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTCTGCCTCCCTGG	-73811588	False	1133	-5	True	AATAAA	-15	NA	73811598	73801915	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73802577_73802673_73802777_73802971_73803082_73803188_73803360_73803573_73803749_73803892_73804017_73804772_73804870_73805586_73805770_73805899_73806029_73806288_73806475_73806656_73806812_73807107_73807196_73807383_73808730_73810798_73810904_73811473
transcript_24765.known	chr10	-	545	2	FSM	ENSG00000166507.19	ENST00000398701.2	545	2	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGGCAAGTTGTAATTT	-73810665	True	NA	2	True	ATTAAA	-24	NA	73811798	73810683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73810904_73811473
transcript_24776.known	chr10	-	3818	21	FSM	ENSG00000148660.21	ENST00000322680.7	3818	21	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	26.6054035864897	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTTACTGCTGTTGG	-73871519	True	NA	0	True	AATAAA	-18	NA	73874591	73812500	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73814506_73815002_73815248_73817022_73817118_73817478_73817555_73819531_73819646_73821681_73821731_73824039_73824085_73825278_73825348_73837467_73837512_73842168_73842212_73842457_73842542_73847224_73847348_73847987_73848083_73848525_73848610_73849012_73849116_73849260_73849334_73852253_73852320_73853191_73853247_73860829_73860890_73872988_73873084_73874396
transcript_24787.nnic	chr10	-	1973	21	NNC	ENSG00000148660.21	novel	1820	21	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	29.2473930462187	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAGATTGTTTAAAA	-73871484	True	NA	NA	False	AAGAAA	-10	NA	73874556	73814287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_73814506_73815002_73815248_73817022_73817118_73817478_73817555_73821681_73821731_73824039_73824085_73825278_73825348_73837467_73837512_73842168_73842212_73842457_73842542_73847224_73847348_73847987_73848083_73848525_73848610_73849012_73849116_73849260_73849334_73852253_73852320_73853191_73853247_73860829_73860890_73872988_73873084_73873389_73873481_73874396
transcript_24803.nic	chr10	-	1953	20	NIC	ENSG00000148660.21	novel	3818	21	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_5	28.8137586402852	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAGATTGTTTAAAA	-73871510	True	NA	NA	False	AAGAAA	-10	NA	73874582	73814287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_73814506_73815002_73815248_73817022_73817118_73817478_73817555_73819531_73819646_73821681_73821731_73824039_73824085_73837467_73837512_73842168_73842212_73842457_73842542_73847224_73847348_73847987_73848083_73848525_73848610_73849012_73849116_73849260_73849334_73852253_73852320_73853191_73853247_73860829_73860890_73872988_73873084_73874396
transcript_24809.nnic	chr10	-	1959	20	NNC	ENSG00000148660.21	novel	1820	21	NA	NA	-66	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_19	23.0559959092732	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAGATTGTTTAAAA	NA	False	NA	NA	False	AAGAAA	-10	NA	73874657	73814287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_73814506_73815002_73815248_73817022_73817118_73817478_73817555_73821681_73821731_73824039_73824085_73825278_73825348_73837467_73837512_73842168_73842212_73842457_73842542_73847224_73847348_73847987_73848083_73848525_73848610_73849012_73849116_73849260_73849334_73852253_73852320_73853191_73853247_73860829_73860890_73872988_73873060_73874396
transcript_24810.nic	chr10	-	1967	20	NIC	ENSG00000148660.21	novel	1820	21	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_6	14.9078424767979	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAGATTGTTTAAAA	-73871569	True	NA	NA	False	AAGAAA	-10	NA	73874641	73814287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_73814506_73815002_73815248_73817022_73817118_73817478_73817555_73821681_73821731_73824039_73824085_73825278_73825348_73837467_73837512_73842168_73842212_73842457_73842542_73847224_73847348_73847987_73848083_73848525_73848610_73849012_73849116_73849260_73849334_73852253_73852320_73853191_73853247_73860829_73860890_73872988_73873084_73874396
transcript_24814.nic	chr10	-	1872	20	NIC	ENSG00000148660.21	novel	1820	21	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	19.7641214986894	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAGATTGTTTAAAA	-73871516	True	NA	NA	False	AAGAAA	-10	NA	73874588	73814287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_73814506_73815002_73815248_73817022_73817118_73817478_73817555_73821681_73821731_73824039_73824085_73825320_73825348_73837467_73837512_73842168_73842212_73842457_73842542_73847224_73847348_73847987_73848083_73848525_73848610_73849012_73849116_73849260_73849334_73852253_73852320_73853191_73853247_73860829_73860890_73872988_73873084_73874396
transcript_24817.known	chr10	-	1822	20	FSM	ENSG00000148660.21	ENST00000372765.5	1822	20	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	31.6952245238574	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAGATTGTTTAAAA	-73871430	True	NA	NA	False	AAGAAA	-10	NA	73874502	73814287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73814506_73815002_73815248_73817022_73817118_73817478_73817555_73821681_73821731_73824039_73824085_73837467_73837512_73839538_73839602_73842168_73842212_73842457_73842542_73847224_73847348_73847987_73848083_73848525_73848610_73849012_73849116_73849260_73849334_73852253_73852320_73853191_73853247_73860829_73860890_73872988_73873084_73874396
transcript_24819.nic	chr10	-	2416	19	NIC	ENSG00000148660.21	novel	1750	20	NA	NA	-5	8	intron_retention	FALSE	canonical	3	47	junction_5	15.2372188901444	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATTGTTTAAAAAAAAAAGG	-73871513	True	NA	NA	False	AAAAAG	-8	NA	73874585	73814279	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_73815248_73817022_73817118_73817478_73817555_73821681_73821731_73824039_73824085_73825278_73825348_73837467_73837512_73842168_73842212_73842457_73842542_73847224_73847348_73847987_73848083_73848525_73848610_73849012_73849116_73849260_73849334_73852253_73852320_73853191_73853247_73860829_73860890_73872988_73873084_73874396
transcript_24832.known	chr10	-	3563	19	FSM	ENSG00000148660.21	ENST00000351293.7	3563	19	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	18.3541968827262	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTTACTGCTGTTGG	-73871447	True	NA	0	True	AATAAA	-18	NA	73874519	73812500	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_73814506_73815002_73815248_73817022_73817118_73817478_73817555_73821681_73821731_73824039_73824085_73837467_73837512_73842168_73842212_73842457_73842542_73847224_73847348_73847987_73848083_73848525_73848610_73849012_73849116_73849260_73849334_73852253_73852320_73853191_73853247_73860829_73860890_73872988_73873084_73874396
transcript_24876.known	chr10	+	2343	11	FSM	ENSG00000122861.16	ENST00000372764.4	2343	11	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	13.9789126901916	366	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAATCTCCCTGGTGCT	73910540	True	NA	24	True	AATAAA	-29	NA	73911131	73917494	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_73911219_73911524_73911613_73912040_73912069_73912214_73912323_73912923_73913099_73913289_73913382_73913538_73913759_73913979_73914129_73914775_73914917_73915250_73915400_73916388
transcript_2488.known	chr1	+	571	6	FSM	ENSG00000251503.8	ENST00000602787.6	571	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	88.2994903722553	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGACTTTCCTCGCTT	10428165	True	NA	NA	False	TTTAAA	-38	NA	10430434	10451411	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_10430569_10433841_10433966_10434656_10434691_10440346_10440414_10442264_10442442_10451376
transcript_24888.known	chr10	+	5497	22	FSM	ENSG00000035403.18	ENST00000211998.10	5497	22	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_18	315.965324312337	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGGATATGTTACTTTAG	73953370	True	NA	15	True	AATAAA	-28	NA	73998115	74120169	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_73998376_74043082_74043154_74070669_74070821_74070974_74071084_74072729_74072853_74074742_74074904_74082453_74082545_74083365_74083514_74089195_74089350_74090022_74090199_74094270_74094462_74095655_74095856_74097203_74097333_74100947_74101098_74103819_74103929_74105050_74105354_74107229_74107355_74108970_74109157_74111908_74112113_74114183_74114388_74114794_74114900_74118022
transcript_2489.known	chr1	+	905	5	FSM	ENSG00000175279.22	ENST00000309048.8	905	5	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	32.104322138927	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCTGGTTACTAATGT	10428163	True	NA	23	True	AATAAA	-15	NA	10430432	10442808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_10430569_10433841_10433966_10434656_10434691_10440346_10440414_10442264
transcript_24895.known	chr10	+	6489	21	FSM	ENSG00000035403.18	ENST00000372755.7	6489	21	0	0	0	0	multi-exon	FALSE	canonical	3	850	junction_5	102.551194532292	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACGCAGGAAAGAATCATTT	73953368	True	NA	NA	False	AATAAA	-17	NA	73998113	74121363	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_73998376_74043082_74043154_74070669_74070821_74070974_74071084_74072729_74072853_74074742_74074904_74082453_74082545_74083365_74083514_74089195_74089350_74090022_74090199_74094270_74094462_74095655_74095856_74097203_74097333_74100947_74101098_74103819_74103929_74105050_74105354_74107229_74107355_74108970_74109157_74114183_74114388_74114794_74114900_74118022
transcript_249.known	SIRV7	-	2247	6	FSM	SIRV7A	SIRV702	2247	6	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_3	1581.10551197572	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGTTAATATGAATCAAC	NA	False	NA	NA	False	TATAAA	-22	NA	114916	1000	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV7_-_2676_2993_3112_4095_4180_4725_4811_43028_43078_114680
transcript_24919.nnic	chr10	-	3880	10	NIC	ENSG00000185009.13	novel	2320	10	NA	NA	-27	1198	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	119.770150241573	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTTGATTTTTTTTAGGT	-74148191	True	NA	NA	False	AATAAA	-14	NA	74150784	74121765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_74123911_74124379_74124525_74126147_74126356_74129107_74129242_74129906_74129993_74134026_74134165_74136631_74136804_74138106_74138383_74138805_74138932_74150334
transcript_24920.known	chr10	-	2320	10	FSM	ENSG00000185009.13	ENST00000372745.1	2320	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	106.121639966294	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAACTTAAGTGAAACCT	-74150630	False	NA	-15	True	ATTAAA	-10	NA	74150842	74122963	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_74123911_74124379_74124525_74126147_74126356_74129107_74129242_74129906_74129993_74134026_74134165_74136631_74136804_74138106_74138383_74138805_74138932_74150754
transcript_24921.nnic	chr10	-	2682	10	NIC	ENSG00000185009.13	novel	2320	10	NA	NA	-27	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	119.770150241573	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAACTTAAGTGAAACCT	-74148191	True	NA	-15	True	ATTAAA	-10	NA	74150784	74122963	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_74123911_74124379_74124525_74126147_74126356_74129107_74129242_74129906_74129993_74134026_74134165_74136631_74136804_74138106_74138383_74138805_74138932_74150334
transcript_24924.nic	chr10	-	3743	9	NIC	ENSG00000185009.13	novel	4889	9	NA	NA	-16	1198	combination_of_known_junctions	FALSE	canonical	3	30	junction_8	93.0005880357753	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTTGATTTTTTTTAGGT	-74148180	True	NA	NA	False	AATAAA	-14	NA	74150773	74121765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_74123911_74124379_74124525_74126147_74126356_74129107_74129242_74129906_74129993_74134026_74134165_74136631_74136804_74138106_74138383_74150334
transcript_24925.known	chr10	-	4889	9	FSM	ENSG00000185009.13	ENST00000355264.9	4889	9	0	0	0	0	multi-exon	TRUE	canonical	3	74	junction_8	79.7134516565429	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAGGATTAGTTTCATT	-74148235	True	NA	-5	True	AATAAA	-18	NA	74150828	74120254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_74123911_74124379_74124525_74126147_74126356_74129107_74129242_74129906_74129993_74134026_74134165_74136631_74136804_74138106_74138383_74150754
transcript_24926.nic	chr10	-	2545	9	NIC	ENSG00000185009.13	novel	2320	10	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_8	93.0005880357753	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAACTTAAGTGAAACCT	-74148180	True	NA	-15	True	ATTAAA	-10	NA	74150773	74122963	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_74123911_74124379_74124525_74126147_74126356_74129107_74129242_74129906_74129993_74134026_74134165_74136631_74136804_74138106_74138383_74150334
transcript_24935.known	chr10	+	1992	11	FSM	ENSG00000156110.15	ENST00000539909.6	1992	11	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_1	74.4782518591837	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATGGTATAATTGGACT	74149673	True	NA	7	True	AATAAA	-19	NA	74151220	74709290	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_74151344_74200763_74200839_74224537_74224592_74314666_74314746_74394140_74394314_74398470_74398580_74525255_74525427_74589281_74589318_74600378_74600494_74670182_74670270_74708320
transcript_2494.known	chr1	+	914	5	FSM	ENSG00000175279.22	ENST00000477755.1	914	5	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	69.9405997972565	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGTCAGAGGATGGAAGC	10430051	False	NA	19	True	AAGAAA	-2	NA	10430782	10442334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_10431402_10433841_10433966_10434656_10434691_10440346_10440414_10442264
transcript_24941.known	chr10	+	1993	11	FSM	ENSG00000156110.15	ENST00000372734.5	1993	11	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	50.3444137914029	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATGGTATAATTGGACT	74174330	True	NA	7	True	AATAAA	-19	NA	74176762	74709290	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_74176887_74200763_74200839_74224537_74224592_74314666_74314746_74394140_74394314_74398470_74398580_74525255_74525427_74589281_74589318_74600378_74600494_74670182_74670270_74708320
transcript_24945.known	chr10	+	2494	10	FSM	ENSG00000156110.15	ENST00000673352.1	2494	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_8	138.834656078355	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAGTGAGGCAAGATCAC	74149692	True	NA	NA	False	NA	NA	NA	74151239	74709926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_74151344_74200763_74200839_74224537_74224592_74314666_74314746_74394140_74394314_74398470_74398580_74525255_74525427_74589281_74589318_74670182_74670270_74708320
transcript_24946.known	chr10	+	1249	10	FSM	ENSG00000156110.15	ENST00000672429.1	1249	10	0	0	0	0	multi-exon	FALSE	canonical	2	29	junction_6	136.114965931808	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAAATTTTTATTTCAT	74149654	True	NA	6	True	ATTAAA	-18	NA	74151201	74708699	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_74151344_74200763_74200839_74224537_74224592_74314666_74314746_74394140_74394314_74398470_74398580_74589281_74589318_74600378_74600494_74670182_74670270_74708320
transcript_24970.known	chr10	+	8209	18	FSM	ENSG00000156650.14	ENST00000648725.1	8209	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.9110851219452	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTTAGCCTCTTGTGT	74824867	True	NA	-1	True	AATAAA	-11	NA	74824935	75032284	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_74825357_74838682_74838753_74842599_74843479_74959969_74960079_74969659_74969776_74970019_74970102_74972506_74972640_74975398_74976331_74977315_74977438_74979223_74979340_74981786_74981929_74985079_74985242_74989018_74989113_75020581_75020814_75021125_75021286_75021880_75022232_75024957_75025250_75028488
transcript_24971.known	chr10	+	2847	16	FSM	ENSG00000156650.14	ENST00000648899.1	2847	16	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_8	12.6694733732526	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGAAGAGGAAGAAGAAG	74824795	True	NA	NA	False	NA	NA	NA	74825557	75022137	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_74825675_74838682_74838753_74842599_74843479_74959969_74960079_74969659_74969776_74970019_74970102_74972506_74972640_74975398_74975455_74977315_74977438_74979223_74979340_74981786_74981929_74985079_74985242_74989018_74989113_75020581_75020814_75021125_75021286_75021880
transcript_24984.nic	chr10	+	3817	16	ISM	ENSG00000156650.14	ENST00000287239.10	8314	18	-25	10487	-5	0	5prime_fragment	FALSE	canonical	3	23	junction_8	12.1918005233025	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGAAGAGGAAGAAGAAG	74825643	True	NA	NA	False	NA	NA	NA	74826574	75022137	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_74826786_74838682_74838753_74842599_74843479_74959969_74960079_74969659_74969776_74970019_74970102_74972506_74972640_74975398_74976331_74977315_74977438_74979223_74979340_74981786_74981929_74985079_74985242_74989018_74989113_75020581_75020814_75021125_75021286_75021880
transcript_24990.known	chr10	+	7027	17	FSM	ENSG00000156650.14	ENST00000372725.6	7027	17	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	15.9372549000761	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTTGTGTCCTGTCATA	74824736	True	NA	8	True	AATAAA	-20	NA	74825498	75032293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_74825675_74842599_74843479_74959969_74960079_74969659_74969776_74970019_74970102_74972506_74972640_74975398_74975455_74977315_74977438_74979223_74979340_74981786_74981929_74985079_74985242_74989018_74989113_75020581_75020814_75021125_75021286_75021880_75022232_75024957_75025250_75028488
transcript_24998.known	chr10	+	877	3	FSM	ENSG00000156650.14	ENST00000648828.1	877	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	28.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATGGGTTGGATAAGAAG	74824858	True	NA	NA	False	NA	NA	NA	74824926	74842972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_74825361_74838682_74838753_74842599
transcript_24999.nic	chr10	+	689	3	ISM	ENSG00000156650.14	ENST00000648899.1	2847	16	-177	179213	-103	0	5prime_fragment	FALSE	canonical	3	27	junction_1	15.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCAAAGGCCCTCTGAA	74825363	False	NA	NA	False	AATAAA	-6	NA	74825380	74842924	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_74825675_74838682_74838753_74842599
transcript_25.known	ERCC-00067	+	628	1	FSM	ERCC-00067A	DQ883653	628	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00067_+_0_600
transcript_250.known	SIRV7	-	428	3	FSM	SIRV7A	SIRV704	428	3	0	0	0	0	multi-exon	FALSE	canonical	3	5708	junction_1	1622	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTTCGTATTTGCTGCT	NA	False	NA	NA	False	ATTAAA	-33	NA	114738	55849	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV7_-_56098_78841_78964_114680
transcript_2500.known	chr1	-	797	1	FSM	ENSG00000271989.1	ENST00000607572.1	797	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTTTGTTTTTATTGT	-10430581	True	NA	NA	False	NA	NA	NA	10430677	10429880	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_10429900_10430700
transcript_25000.nic	chr10	+	750	3	ISM	ENSG00000156650.14	ENST00000649442.1	3770	4	-149	119660	12	0	5prime_fragment	FALSE	canonical	3	30	junction_1	14	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCAAAGGCCCTCTGAA	74826350	False	NA	NA	False	AATAAA	-6	NA	74826430	74842924	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_74826786_74838682_74838753_74842599
transcript_25001.known	chr10	+	529	3	FSM	ENSG00000156650.14	ENST00000604130.1	529	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	29	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCAAAGGCCCTCTGAA	74827007	False	NA	NA	False	AATAAA	-6	NA	74827136	74842924	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_74827271_74838682_74838753_74842599
transcript_25002.known	chr10	+	6761	6	FSM	ENSG00000156671.15	ENST00000542569.6	6761	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	15.587174214719	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGTTTCTTATTGAAAT	75110496	True	NA	NA	False	AATAAA	-17	NA	75111655	75182123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_75111723_75150513_75151107_75164644_75164741_75168540_75168659_75176065_75176217_75176387
transcript_25019.known	chr10	+	1557	10	FSM	ENSG00000165637.14	ENST00000332211.11	1512	10	-45	0	-24	0	multi-exon	FALSE	canonical	3	2672	junction_4	152.087775176129	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGGCTCCAAGTATTTG	75210457	False	NA	14	True	AATAAA	-15	NA	75210750	75231448	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_75210939_75211133_75211190_75212229_75212299_75214020_75214071_75219062_75219216_75219303_75219357_75220742_75220971_75222251_75222403_75229643_75229702_75230897
transcript_25020.known	chr10	-	1250	7	FSM	ENSG00000165644.11	ENST00000372538.8	1250	7	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_6	55.9665078417441	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACGGGTGTCACTTGTGTG	-75234449	True	NA	NA	False	NA	NA	NA	75235957	75233640	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_75234226_75234609_75234744_75234937_75234993_75235059_75235179_75235266_75235373_75235615_75235744_75235834
transcript_25021.nnic	chr10	-	890	6	NIC	ENSG00000165644.11	novel	1250	7	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_5	91.4010940853555	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGAGCCTCCGTGTGT	NA	False	NA	-7	True	AATAAA	-20	NA	75236055	75233970	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_75234226_75234609_75234744_75234937_75234993_75235059_75235179_75235266_75235373_75235834
transcript_25026.nnic	chr10	-	694	5	NIC	ENSG00000165644.11	novel	1250	7	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_4	99.0388181472295	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGAGCCTCCGTGTGT	-75234457	True	NA	-7	True	AATAAA	-20	NA	75235965	75233970	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_75234226_75234609_75234744_75234937_75234993_75235059_75235179_75235834
transcript_25033.known	chr10	-	871	7	FSM	ENSG00000165644.11	ENST00000469299.1	871	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	94.1713863124038	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGACACACGACCTCCTG	-75234417	True	NA	-20	True	AATAAA	-7	NA	75235925	75233983	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_75234226_75234609_75234744_75234937_75234993_75235059_75235179_75235266_75235373_75235619_75235744_75235834
transcript_25034.known	chr10	-	796	5	FSM	ENSG00000165644.11	ENST00000470947.5	796	5	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_3	17.1810215063017	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGACACACGACCTCCTG	-75235500	False	NA	-20	True	AATAAA	-7	NA	75235512	75233983	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_75234226_75234609_75234744_75234937_75234993_75235059_75235179_75235266
transcript_25036.known	chr10	-	3434	29	FSM	ENSG00000156113.24	ENST00000640093.1	3434	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.0612322045695	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGGATAATGCCTATCCCA	-77637409	False	NA	NA	False	AAGAAA	-15	NA	77637447	76877868	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_76877894_76887290_76887516_76889450_76889570_76891524_76891720_76909965_76910097_76914935_76915050_76944772_76944966_76949141_76949367_76953800_76953925_76969973_76970068_77011966_77012044_77019012_77019100_77027822_77027892_77039527_77039638_77073096_77073253_77079480_77079551_77084636_77084720_77086487_77086594_77090399_77090511_77108285_77108378_77108480_77108573_77110172_77110344_77112366_77112443_77120972_77121049_77183420_77183533_77184822_77184917_77251194_77251257_77403861_77404024_77637264
transcript_25038.known	chr10	-	2963	2	FSM	ENSG00000156113.24	ENST00000480683.2	2963	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAACCTCTCTGGTGTCTA	-77637783	False	NA	NA	False	AATAAA	-22	NA	77637821	77634109	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_77636516_77637264
transcript_25039.known	chr10	-	896	2	FSM	ENSG00000156113.24	ENST00000481070.1	896	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGTGAGCCAGCTGCCTT	-77637751	False	NA	NA	False	AATAAA	-21	NA	77637789	77636198	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_77636570_77637264
transcript_25040.known	chr10	+	487	2	FSM	ENSG00000233871.2	ENST00000449852.1	487	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCAGTGGTTCTTGTTTTA	NA	False	NA	4	True	AATAAA	-14	NA	77927371	77929824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_77927623_77929588
transcript_25042.known	chr10	-	6610	31	FSM	ENSG00000148606.14	ENST00000372371.8	6610	31	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_13	23.5518340875799	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCATGAATAGTTACAAATT	-78025007	True	NA	-30	True	AATAAA	-23	NA	78029515	77975148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_77977627_77980140_77980274_77981427_77981560_77982153_77982319_77982652_77982818_77983919_77984013_77984204_77984299_77985169_77985341_77985902_77985986_77986072_77986160_77991053_77991168_77993196_77993368_77999980_78000119_78000975_78001095_78002196_78002309_78004715_78004889_78007701_78007867_78009536_78009676_78009863_78009992_78010470_78010541_78013649_78013791_78017574_78017717_78019161_78019266_78021545_78021683_78021859_78022023_78022144_78022385_78024548_78024704_78024970_78025143_78025621_78025760_78026093_78026230_78029363
transcript_25054.nic	chr10	-	3062	21	ISM	ENSG00000148606.14	ENST00000372371.8	6610	31	-53	15905	-53	55	5prime_fragment	FALSE	canonical	3	158	junction_3	19.9069711407838	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCTCTGCCAGGTGCTG	-78025060	True	NA	NA	False	NA	NA	NA	78029568	77991053	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_77991168_77993196_77993368_77999980_78000119_78000975_78001095_78002196_78002309_78004715_78004889_78007701_78007867_78009536_78009676_78009863_78009992_78010470_78010541_78013649_78013791_78017574_78017717_78019161_78019266_78021545_78021683_78021859_78022023_78022144_78022385_78024548_78024704_78024970_78025143_78025621_78025760_78026093_78026230_78029363
transcript_2506.known	chr1	+	1922	9	FSM	ENSG00000142655.13	ENST00000356607.9	1922	9	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_3	8.27552868401772	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGCCTGTGGCTCCCTG	10471629	True	NA	10	True	AATAAA	-21	NA	10474949	10630758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_10475003_10495273_10495322_10536212_10536298_10599237_10599367_10618331_10618418_10623018_10623122_10624339_10624438_10627271_10627364_10629530
transcript_25064.nic	chr10	-	597	4	ISM	ENSG00000148606.14	ENST00000372371.8	6610	31	-53	49876	-53	-11939	5prime_fragment	FALSE	canonical	3	195	junction_1	10.4986771653491	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTGACAAGTGCCGGAAG	-78025060	True	NA	NA	False	AAAAAG	-5	NA	78029568	78025024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_78025143_78025621_78025760_78026093_78026230_78029363
transcript_25065.known	chr10	+	537	7	FSM	ENSG00000138326.21	ENST00000360830.9	537	7	0	0	0	0	multi-exon	FALSE	canonical	2	53	junction_5	5938.98893377952	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTGGTTGTTTGAAAT	77943673	True	NA	14	True	AATAAA	-13	NA	78033862	78040697	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193_78037305_78037438_78037442_78040203_78040226_78040614
transcript_25066.known	chr10	+	583	7	FSM	ENSG00000138326.21	ENST00000645440.1	583	7	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_5	5899.16990629473	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTTGTTTGAAATGTAT	77943646	True	NA	18	True	AATAAA	-17	NA	78033835	78040701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193_78037305_78037964_78037983_78040203_78040226_78040614
transcript_25069.known	chr10	+	3307	6	FSM	ENSG00000138326.21	ENST00000645698.1	3307	6	0	0	0	0	multi-exon	FALSE	canonical	2	69	junction_4	5477.8888415155	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTTGCAGTTTCCTGGG	77943684	True	NA	33	True	AATAAA	-32	NA	78033873	78040716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193_78037305_78037438_78040226_78040614
transcript_2507.nnic	chr1	+	1954	9	NNC	ENSG00000142655.13	novel	1922	9	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	31.0722444474164	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGCCTGTGGCTCCCTG	10471675	True	NA	10	True	AATAAA	-21	NA	10474995	10630758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_10475081_10495273_10495322_10536212_10536298_10599237_10599367_10618331_10618418_10623018_10623122_10624339_10624438_10627271_10627364_10629530
transcript_25071.known	chr10	+	534	6	FSM	ENSG00000138326.21	ENST00000372360.9	534	6	0	0	0	0	multi-exon	FALSE	canonical	3	4485	junction_4	4239.05690454846	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTGGTTGTTTGAAAT	77943673	True	NA	14	True	AATAAA	-13	NA	78033862	78040697	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193_78037305_78040203_78040226_78040614
transcript_25072.known	chr10	+	806	6	FSM	ENSG00000138326.21	ENST00000476545.6	806	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	6414.93143844889	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGATTGCGGAGGGGCT	77943687	True	NA	NA	False	NA	NA	NA	78033876	78054676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193_78037305_78048980_78049226_78054530
transcript_25080.known	chr10	+	634	5	FSM	ENSG00000138326.21	ENST00000613865.5	634	5	0	0	0	0	multi-exon	FALSE	canonical	3	5804	junction_4	3360.69869037675	1585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTTGCAGTTTCCTGGG	77943570	True	NA	33	True	AATAAA	-32	NA	78033759	78040716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193_78037305_78040614
transcript_25082.known	chr10	+	539	5	FSM	ENSG00000138326.21	ENST00000482069.5	539	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5910.82855338403	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTCTGGTTGTTTGAAA	77943727	False	NA	13	True	AATAAA	-12	NA	78033916	78040696	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_78033987_78035351_78035418_78035510_78035721_78037193_78037305_78040614
transcript_25086.known	chr10	+	1008	4	FSM	ENSG00000138326.21	ENST00000478655.6	1008	4	0	0	0	0	multi-exon	FALSE	canonical	3	10554	junction_1	1643.97816963067	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAAGTGTTCTGTGAACT	77943673	True	NA	NA	False	AATAGA	-32	NA	78033862	78037883	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193
transcript_25088.known	chr10	+	1104	3	FSM	ENSG00000138326.21	ENST00000466129.6	1104	3	0	0	0	0	multi-exon	FALSE	canonical	3	10554	junction_1	1514	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACCTCGTAATCCGCC	77943696	True	NA	NA	False	NA	NA	NA	78033885	78036529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_78033905_78035351_78035418_78035510
transcript_25089.known	chr10	+	714	4	FSM	ENSG00000138326.21	ENST00000475468.6	714	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6595.43308324446	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTCAAGAAAGCAACGAAAG	77943714	True	NA	-23	True	AAAAAG	-2	NA	78033903	78037218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_78034317_78035351_78035418_78035510_78035721_78037193
transcript_25090.known	chr10	+	605	3	FSM	ENSG00000138326.21	ENST00000646254.1	605	3	0	0	0	0	multi-exon	FALSE	canonical	2	373	junction_1	6604.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGAGAAAAAGTTATTTC	78034198	False	NA	NA	False	AAAAAG	-39	NA	78034209	78035837	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_78034422_78035351_78035418_78035510
transcript_25091.known	chr10	+	2146	1	FSM	ENSG00000138326.21	ENST00000480662.2	2146	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTTGTTTGAAATGTAT	78038492	False	NA	18	True	AATAAA	-17	NA	78038555	78040701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_78038600_78040700
transcript_25092.known	chr10	+	656	6	FSM	ENSG00000138326.21	ENST00000435275.5	656	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	5499.53352930955	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTATTTGCAGTTTCCT	77943570	True	NA	30	True	AATAAA	-29	NA	78033759	78040713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193_78037305_78040200_78040226_78040614
transcript_25094.nic	chr10	+	1959	7	ISM	ENSG00000108175.19	ENST00000334512.10	7615	25	-37	99244	-37	-73810	5prime_fragment	FALSE	canonical	3	49	junction_3	4.53382350291181	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCCGGGTGTGGTGGCGG	79066574	True	NA	NA	False	AATACA	-8	NA	79068928	79217275	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_79069271_79118914_79119025_79139681_79139778_79162052_79162134_79201583_79201693_79208335_79208450_79216168
transcript_25095.nic	chr10	+	2129	7	ISM	ENSG00000108175.19	ENST00000334512.10	7615	25	-37	99074	-37	-73640	5prime_fragment	FALSE	canonical	3	49	junction_3	4.53382350291181	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATAAAGTACCTAGCACC	79066574	True	NA	NA	False	AAAAAG	-12	NA	79068928	79217445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_79069271_79118914_79119025_79139681_79139778_79162052_79162134_79201583_79201693_79208335_79208450_79216168
transcript_25098.known	chr10	+	821	6	FSM	ENSG00000108179.14	ENST00000448165.1	821	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	149.388620717911	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAAGCATTGCCTGTGAT	79347614	False	NA	NA	False	NA	NA	NA	79347657	79354086	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_79347744_79349075_79349107_79349664_79349754_79351486_79351584_79352316_79352393_79353644
transcript_251.known	SIRV8001	+	8001	1	FSM	SIRV8001A	SIRV8001	8001	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	8001	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV8001_+_0_8000
transcript_2510.nnic	chr1	+	1877	8	NIC	ENSG00000142655.13	novel	1922	9	NA	NA	-84	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_3	33.3894765286481	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGCCTGTGGCTCCCTG	NA	False	NA	10	True	AATAAA	-21	NA	10474865	10630758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_10475003_10495273_10495322_10536212_10536298_10618331_10618418_10623018_10623122_10624339_10624438_10627271_10627364_10629530
transcript_25100.known	chr10	+	2196	6	FSM	ENSG00000108179.14	ENST00000225174.8	2196	6	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_5	19.4894843441277	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTCAGTCTCAAGTATTT	79336051	True	NA	NA	False	AATAAA	-1	NA	79347468	79355334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_79347744_79349075_79349107_79349664_79349754_79351486_79351584_79352316_79352393_79353706
transcript_25107.known	chr10	-	4930	4	FSM	ENSG00000165424.7	ENST00000372336.4	4930	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	1.24721912892465	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTCACAGGTTTCCTTG	-79445116	True	NA	3	True	ATTAAA	-20	NA	79445624	79382324	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_79386459_79394275_79394441_79432557_79432759_79445194
transcript_25111.known	chr10	-	993	7	FSM	ENSG00000225484.7	ENST00000670682.1	993	7	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_4	70.7106781186548	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCGGGTGTGGTGGCTCA	-79826271	False	NA	-26	True	AATAAA	-13	NA	79826282	79691503	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_79692057_79766270_79766325_79804484_79804528_79806038_79806123_79808762_79808833_79814612_79814717_79826197
transcript_25118.known	chr10	-	4096	6	FSM	ENSG00000225484.7	ENST00000665716.1	4096	6	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_3	12.687001221723	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCACACTTTTCTTGGT	-79823163	True	NA	NA	False	AATAGA	-31	NA	79826484	79762820	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_79766325_79804484_79804528_79806038_79806123_79808758_79808833_79814612_79814717_79826197
transcript_25124.known	chr10	-	716	6	FSM	ENSG00000225484.7	ENST00000496359.6	716	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	49.9799959983992	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATATGGTTCTATCTGGC	-79826277	False	NA	NA	False	GATAAA	-14	NA	79826288	79797707	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_79798028_79804484_79804528_79806038_79806123_79808758_79808833_79814612_79814717_79826197
transcript_25127.known	chr10	-	867	5	FSM	ENSG00000225484.7	ENST00000483080.6	867	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	72.1803297304744	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTTGCTTGTACAGCCT	-79826286	False	NA	-15	True	ATTAAA	-24	NA	79826297	79765788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_79766325_79804484_79804528_79806038_79806123_79814612_79814717_79826197
transcript_25129.known	chr10	-	463	5	FSM	ENSG00000225484.7	ENST00000488805.5	463	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	73.086849022242	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGGTTTTCTTTTGAGG	-79823083	True	NA	NA	False	NA	NA	NA	79826404	79766289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_79766325_79804484_79804528_79808758_79808833_79814612_79814717_79826197
transcript_25130.known	chr10	-	2730	5	FSM	ENSG00000225484.7	ENST00000659471.1	2730	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	75.3437953649801	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATATTAAAGGATATAAACT	-79826348	False	NA	NA	False	NA	NA	NA	79826359	79795690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_79798028_79804484_79804528_79806038_79806123_79814612_79814717_79826197
transcript_25132.known	chr10	-	880	5	FSM	ENSG00000225484.7	ENST00000669121.1	880	5	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_2	13.4976849866931	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTTTTATTATTTTAA	-79826333	False	NA	NA	False	AATAAA	-16	NA	79826344	79804056	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_79804528_79806038_79806123_79808758_79808833_79814612_79814717_79826197
transcript_25133.known	chr10	+	1701	1	FSM	ENSG00000272447.1	ENST00000605920.1	1701	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATCATCTTAATTTGAGT	79825792	True	NA	NA	False	NA	NA	NA	79825901	79827602	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_79825900_79827600
transcript_25137.known	chr10	+	860	5	FSM	ENSG00000133678.14	ENST00000372275.5	860	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	100.614052199482	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGCTGCACTAAGATAAAG	80075706	True	NA	NA	False	NA	NA	NA	80078681	80091335	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_80078787_80081840_80081945_80082144_80082205_80090379_80090432_80090796
transcript_25140.known	chr10	+	785	5	FSM	ENSG00000133678.14	ENST00000476173.5	785	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	93.1541061896898	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGACACTTCCACTATAT	80078837	False	NA	NA	False	NA	NA	NA	80079294	80091352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_80079308_80081840_80081945_80082144_80082205_80090379_80090432_80090796
transcript_25141.known	chr10	+	847	5	FSM	ENSG00000133678.14	ENST00000463029.5	847	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	94.0438727403333	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGTGACACTTCCACTA	80078815	True	NA	NA	False	NA	NA	NA	80079272	80091349	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_80079308_80081639_80081735_80081840_80081945_80082144_80082205_80090796
transcript_25144.known	chr10	-	2189	5	FSM	ENSG00000230091.6	ENST00000432070.2	2189	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.59807621135332	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-80078854	True	NA	NA	False	NA	NA	NA	80078912	80047721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_80049179_80053395_80053587_80055915_80056127_80060789_80060934_80078726
transcript_25148.known	chr10	+	2041	4	FSM	ENSG00000133678.14	ENST00000372281.8	2041	4	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_3	19.5959179422654	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAATGCTTTTCTTGTAT	80075689	True	NA	16	True	AATAAA	-20	NA	80078664	80092551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_80078787_80081840_80081945_80082144_80082205_80090796
transcript_25150.known	chr10	+	1963	4	FSM	ENSG00000133678.14	ENST00000467529.5	1963	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	94.4504573249325	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTCTTGTATTTGTCA	80078812	True	NA	22	True	AATAAA	-26	NA	80079269	80092557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_80079308_80081840_80081945_80082144_80082205_80090796
transcript_25152.known	chr10	-	1899	4	FSM	ENSG00000230091.6	ENST00000448729.6	1899	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	1.24721912892465	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGATACCT	-80078786	True	NA	NA	False	NA	NA	NA	80078844	80047706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_80049179_80053395_80053587_80060815_80060934_80078726
transcript_25154.known	chr10	+	2154	5	FSM	ENSG00000133678.14	ENST00000613758.4	2154	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	97.3508474539385	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGAATGCTTTTCTTGTA	NA	False	NA	15	True	AATAAA	-19	NA	80078645	80092550	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_80078787_80081639_80081735_80081840_80081945_80082144_80082205_80090796
transcript_25156.known	chr10	+	776	4	FSM	ENSG00000189129.14	ENST00000372263.4	776	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	5.35412613473634	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCCTATGAAGTGAAAT	80132502	False	NA	NA	False	ATTAAA	-25	NA	80132729	80145359	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_80132827_80142081_80142180_80144222_80144344_80144899
transcript_2518.known	chr1	-	6035	6	FSM	ENSG00000160049.12	ENST00000377038.8	6035	6	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_1	118.404391810439	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTGTTCAAGCTTTTTT	-10459169	True	NA	0	True	AATAAA	-33	NA	10472529	10456521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_10461703_10463057_10463210_10463430_10463621_10467189_10467333_10469176_10469339_10472322
transcript_25181.known	chr10	-	6734	16	FSM	ENSG00000122359.18	ENST00000422982.8	6734	16	0	0	0	0	multi-exon	TRUE	canonical	2	204	junction_15	69.7564015381782	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTTGTTGTGTTTTAGC	-80198054	True	NA	-2	True	AATAAA	-18	NA	80205537	80150888	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_80155913_80157640_80157764_80157966_80158026_80159099_80159196_80161934_80162029_80163348_80163406_80163533_80163614_80164052_80164144_80166083_80166198_80166889_80166985_80167225_80167314_80168968_80169359_80170799_80170916_80172806_80172870_80176106_80176156_80205342
transcript_25183.known	chr10	-	6720	15	FSM	ENSG00000122359.18	ENST00000372231.7	6720	15	0	0	0	0	multi-exon	FALSE	canonical	2	170	junction_14	70.4796974674412	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTTGTTGTGTTTTAGC	-80198089	True	NA	-2	True	AATAAA	-18	NA	80205572	80150888	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_80155913_80157640_80157764_80157966_80158026_80159099_80159196_80161934_80162029_80163348_80163406_80163533_80163614_80164052_80164144_80166083_80166198_80166889_80166985_80167225_80167314_80168968_80169359_80170799_80170916_80172806_80172870_80205342
transcript_2519.known	chr1	-	1403	5	FSM	ENSG00000160049.12	ENST00000377036.2	1403	5	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_1	48.9846914862184	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGTTGGTGTTGTAAG	-10459128	True	NA	-9	True	AGTAAA	-15	NA	10472488	10462467	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_10463210_10463430_10463621_10467189_10467333_10469176_10469339_10472322
transcript_25199.known	chr10	+	2161	2	FSM	ENSG00000237523.2	ENST00000422847.1	2161	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCGGCTCTGCGTGAATT	80207699	False	NA	NA	False	AATAAA	-17	NA	80207709	80219657	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_80208232_80218018
transcript_252.known	SIRV8002	+	8000	1	FSM	SIRV8002A	SIRV8002	8000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	8000	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV8002_+_0_8000
transcript_2520.known	chr1	-	4405	16	FSM	ENSG00000130940.15	ENST00000344008.5	4405	16	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	5.29989517716048	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCGCCTGAGTGGCAGCTG	-10796201	True	NA	-9	True	AATAAA	-22	NA	10796650	10647212	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_10648140_10649069_10649193_10649282_10649438_10650691_10650756_10650940_10651077_10653376_10654219_10654418_10654592_10655648_10655814_10656645_10656737_10658507_10658577_10659701_10660537_10665082_10665572_10693873_10693913_10705491_10705545_10760700_10760858_10796563
transcript_25200.known	chr10	-	3384	9	FSM	ENSG00000151224.13	ENST00000372213.8	3384	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_6	3.82222121285516	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTATGCTTAGTTATTCTC	-80289521	True	NA	0	True	AATAAA	-18	NA	80289658	80271819	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_80273884_80274519_80274654_80275016_80275200_80276375_80276595_80280172_80280317_80280679_80280793_80283915_80284039_80285511_80285590_80289332
transcript_25201.nic	chr10	-	3307	8	NIC	ENSG00000151224.13	novel	3384	9	NA	NA	-46	0	intron_retention	FALSE	canonical	2	6	junction_6	5.48839220351387	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTATGCTTAGTTATTCTC	NA	False	NA	0	True	AATAAA	-18	NA	80289704	80271819	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_80273884_80274519_80274654_80275016_80275200_80276375_80276595_80280172_80280317_80280679_80280793_80285511_80285590_80289332
transcript_25203.known	chr10	+	1863	5	FSM	ENSG00000133665.13	ENST00000256039.3	1863	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	12.0908022893437	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTTTTGTGACTGGCT	80356536	True	NA	7	True	TATAAA	-18	NA	80356780	80368073	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_80356826_80357892_80358046_80362434_80362591_80362950_80363074_80366687
transcript_25205.known	chr10	+	439	4	FSM	ENSG00000133665.13	ENST00000411538.5	439	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	4.02768199119819	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCTGATTCCAGGAATGC	80356528	True	NA	NA	False	NA	NA	NA	80356772	80366794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_80356826_80362434_80362591_80362950_80363074_80366687
transcript_25213.known	chr10	+	5801	6	FSM	ENSG00000122378.14	ENST00000606162.6	5801	6	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_1	67.8539608276481	256	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTCTTGTCAGTGATT	80403694	True	NA	11	True	AATAAA	-25	NA	80408550	80437115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_80408644_80420465_80420646_80422416_80422509_80425865_80426007_80427331_80427497_80431985
transcript_25223.known	chr10	+	16221	11	FSM	ENSG00000108219.15	ENST00000372158.6	16221	11	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	94.4045020112918	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTGTCATTTTTCTCCG	80451350	True	NA	NA	False	TATAAA	-17	NA	80454309	80533124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_80454372_80463087_80463128_80468546_80468688_80489216_80489315_80504727_80504779_80507227_80507375_80509300_80509472_80512143_80512270_80514018_80514064_80516203_80516324_80517904
transcript_25224.nnic	chr10	+	2852	10	NIC	ENSG00000108219.15	novel	16221	11	NA	NA	-23	0	combination_of_known_splicesites	FALSE	canonical	3	55	junction_1	70.4994527603312	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGTTTTGGTCATTTT	NA	False	NA	6	True	AATATA	-11	NA	80454142	80519628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_80454372_80468546_80468688_80489216_80489315_80504727_80504779_80507227_80507375_80509300_80509472_80512143_80512270_80514018_80514064_80516203_80516324_80517904
transcript_25234.known	chr10	+	855	9	FSM	ENSG00000108219.15	ENST00000372157.6	855	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	73.7915137397248	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGGACGCTGATCTCAGA	80451362	True	NA	NA	False	NA	NA	NA	80454321	80517922	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_80454372_80489216_80489315_80504727_80504779_80507198_80507375_80509300_80509472_80512143_80512270_80514018_80514064_80516203_80516324_80517904
transcript_25235.known	chr10	+	16183	9	FSM	ENSG00000108219.15	ENST00000429989.7	16183	9	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	27.617928959283	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAAGTGTCATTTTTCTCC	80454096	False	NA	NA	False	TATAAA	-16	NA	80454165	80533123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_80454372_80489216_80489315_80504727_80504779_80507227_80507375_80509300_80509472_80512143_80512270_80514018_80514064_80516203_80516324_80517904
transcript_25238.known	chr10	+	1037	8	FSM	ENSG00000108219.15	ENST00000341863.10	1037	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	78.7869770653884	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCATCCAGACATCTGCT	80451395	False	NA	NA	False	NA	NA	NA	80454354	80518337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_80454372_80489216_80489315_80504727_80504779_80507227_80507375_80512143_80512270_80514018_80514064_80516203_80516324_80517904
transcript_25239.known	chr10	+	5476	8	FSM	ENSG00000108219.15	ENST00000372164.7	5476	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	75.488342119286	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAAAAGTGAAAGTATGTC	80451370	True	NA	16	True	AATAAA	-25	NA	80454329	80522631	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_80454372_80489216_80489315_80507227_80507375_80509300_80509472_80512143_80512270_80514018_80514064_80516203_80516324_80517904
transcript_25241.nnic	chr10	+	2594	8	NIC	ENSG00000108219.15	novel	16183	9	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	77.5015470549999	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGTTTTGGTCATTTT	80454092	True	NA	6	True	AATATA	-11	NA	80454161	80519628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_80454372_80504727_80504779_80507227_80507375_80509300_80509472_80512143_80512270_80514018_80514064_80516203_80516324_80517904
transcript_25243.nnic	chr10	+	2409	7	NIC	ENSG00000108219.15	novel	5476	8	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	81.0178306849109	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGTTTTGGTCATTTT	80451287	True	NA	6	True	AATATA	-11	NA	80454246	80519628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_80454372_80489216_80489315_80509300_80509472_80512143_80512270_80514018_80514064_80516203_80516324_80517904
transcript_25245.known	chr10	+	808	6	FSM	ENSG00000108219.15	ENST00000481124.5	808	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	86.0850741998867	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTATGTGGGAGTGGT	80451305	True	NA	NA	False	NA	NA	NA	80454264	80518216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_80454372_80489216_80489315_80512143_80512270_80514018_80514064_80516203_80516324_80517904
transcript_25246.known	chr10	-	3509	2	FSM	ENSG00000287358.1	ENST00000666227.1	3509	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTAGTTCTAACCATAC	-81875121	False	NA	NA	False	AATAAA	-45	NA	81875133	81870777	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_81873502_81874348
transcript_25248.known	chr10	+	2382	9	FSM	ENSG00000165678.22	ENST00000372134.6	2382	9	0	0	0	0	multi-exon	FALSE	canonical	3	1257	junction_1	148.761921791163	417	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGACTGAGGTGATTGCT	84120807	True	NA	NA	False	AATGAA	-17	NA	84139508	84153568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_84139594_84141461_84141630_84142654_84142755_84143994_84144107_84144874_84145017_84148729_84148839_84150054_84150244_84150708_84150881_84152263
transcript_25254.known	chr10	+	6877	17	FSM	ENSG00000148600.15	ENST00000623527.4	6877	17	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_12	2.68967934891875	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCGGAAACTGTAGCATCT	84194107	True	NA	NA	False	AATAAA	-27	NA	84194536	84218694	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_84194816_84195493_84195590_84196504_84196651_84197785_84197837_84199031_84199122_84200600_84200688_84201806_84201921_84202979_84203124_84204526_84204606_84205826_84205928_84208173_84208378_84208728_84208882_84211000_84211166_84211647_84211716_84212178_84212408_84213090_84213349_84214081
transcript_25258.known	chr10	+	7664	11	FSM	ENSG00000107771.17	ENST00000224756.12	7664	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_10	34.3569498064074	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTCTTGTCTTTCTCAAC	84325658	True	NA	13	True	AATAAA	-23	NA	84328662	84518517	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_84328809_84371013_84372470_84373618_84373816_84417770_84417862_84425730_84425894_84438511_84438708_84463932_84464017_84470371_84470459_84477574_84477665_84499874_84499960_84513448
transcript_25262.known	chr10	+	7653	10	FSM	ENSG00000107771.17	ENST00000372088.8	7653	10	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_9	17.5611805334492	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTCTTGTCTTTCTCAAC	84325584	True	NA	13	True	AATAAA	-23	NA	84328588	84518517	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_84328809_84371013_84372470_84373618_84373816_84417770_84417862_84425730_84425894_84438511_84438708_84463932_84464017_84470371_84470459_84477574_84477665_84513448
transcript_25266.nic	chr10	+	2566	9	ISM	ENSG00000107771.17	ENST00000372088.8	7653	10	-45	40916	-42	13656	5prime_fragment	FALSE	canonical	3	71	junction_8	15.3276710559693	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTAAAGAGGAAAAATGCAC	84325539	True	NA	NA	False	NA	NA	NA	84328543	84477601	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_84328809_84371013_84372470_84373618_84373816_84417770_84417862_84425730_84425894_84438511_84438708_84463932_84464017_84470371_84470459_84477574
transcript_25269.nic	chr10	+	2506	8	ISM	ENSG00000107771.17	ENST00000372088.8	7653	10	-45	48092	-42	6480	5prime_fragment	FALSE	canonical	3	72	junction_7	14.73299781069	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGAAAAGATCCAACTATT	84325539	True	NA	NA	False	AATAAA	-29	NA	84328543	84470425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_84328809_84371013_84372470_84373618_84373816_84417770_84417862_84425730_84425894_84438511_84438708_84463932_84464017_84470371
transcript_25270.nic	chr10	+	2452	7	ISM	ENSG00000107771.17	ENST00000372088.8	7653	10	-45	54501	-42	71	5prime_fragment	FALSE	canonical	3	78	junction_4	13.4505266315735	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGACTATGTAGTCATGC	84325539	True	NA	NA	False	GATAAA	-10	NA	84328543	84464016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_84328809_84371013_84372470_84373618_84373816_84417770_84417862_84425730_84425894_84438511_84438708_84463932
transcript_25275.known	chr10	+	2066	3	FSM	ENSG00000107771.17	ENST00000359979.8	2066	3	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	5.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACTTAAATATACTCAACA	84325581	True	NA	NA	False	AATAAA	-22	NA	84328585	84374005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_84328809_84371013_84372470_84373618
transcript_25277.known	chr10	-	6310	19	FSM	ENSG00000062650.20	ENST00000298767.10	6310	19	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_16	49.8921058106613	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTGTCTTTAACATAAG	-86513351	True	NA	NA	False	AATAAA	-19	NA	86521792	86435255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_86437609_86437919_86438016_86443274_86443364_86446241_86446450_86451966_86452132_86453219_86453336_86453655_86453832_86458988_86459066_86460398_86460497_86461175_86461288_86467278_86467507_86470991_86471104_86472207_86472345_86472611_86472765_86473877_86473974_86497200_86497320_86499717_86500744_86517570_86518092_86521364
transcript_25290.nnic	chr10	-	2641	10	NNC	ENSG00000062650.20	novel	6310	19	NA	NA	-10	-282	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	151.760044514724	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGAAGGCTCTGTGAAACT	-86513361	True	NA	NA	False	ATTAAA	-8	NA	86521802	86467334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_86467507_86470991_86471104_86472207_86472345_86472611_86472765_86473877_86473974_86497200_86497320_86499717_86500744_86517570_86518092_86521364_86521542_86521674
transcript_25291.nic	chr10	-	2830	9	ISM	ENSG00000062650.20	ENST00000298767.10	6310	19	-66	32079	-66	-282	5prime_fragment	FALSE	canonical	3	361	junction_6	47.2491732731907	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGAAGGCTCTGTGAAACT	NA	False	NA	NA	False	ATTAAA	-8	NA	86521858	86467334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_86467507_86470991_86471104_86472207_86472345_86472611_86472765_86473877_86473974_86497200_86497320_86499717_86500744_86517570_86518092_86521364
transcript_25298.nic	chr10	-	2350	6	ISM	ENSG00000062650.20	ENST00000298767.10	6310	19	-10	37359	-10	-5562	5prime_fragment	FALSE	canonical	3	361	junction_3	44.6112093537039	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGTAAGCAGCCATATACA	-86513361	True	NA	NA	False	NA	NA	NA	86521802	86472614	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_86472765_86473877_86473974_86497200_86497320_86499717_86500744_86517570_86518092_86521364
transcript_253.known	SIRV8003	+	8000	1	FSM	SIRV8003A	SIRV8003	8000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	8000	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV8003_+_0_8000
transcript_25301.nic	chr10	-	2106	4	ISM	ENSG00000062650.20	ENST00000298767.10	6310	19	-66	61999	-66	-30202	5prime_fragment	FALSE	canonical	3	361	junction_1	47.1475226166645	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAGGAGATAAATCAAAGGA	NA	False	NA	NA	False	AATAAA	-1	NA	86521858	86497254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_86497320_86499717_86500744_86517570_86518092_86521364
transcript_25305.nic	chr10	-	3301	3	ISM	ENSG00000062650.20	ENST00000298767.10	6310	19	2	63134	2	-31337	5prime_fragment	FALSE	canonical	3	434	junction_2	20.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATCCAGTGTTGTCTTTG	-86513349	True	NA	NA	False	AAAAAG	-11	NA	86521790	86498389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_86500744_86517570_86518092_86521364
transcript_25306.nic	chr10	-	1951	3	ISM	ENSG00000062650.20	ENST00000298767.10	6310	19	-66	64552	-66	-32755	5prime_fragment	FALSE	canonical	3	434	junction_2	20.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTAAAACAGCTCCATCA	NA	False	NA	NA	False	AAGAAA	-15	NA	86521858	86499807	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_86500744_86517570_86518092_86521364
transcript_25307.nic	chr10	-	1781	3	ISM	ENSG00000062650.20	ENST00000298767.10	6310	19	-66	64722	-66	-32925	5prime_fragment	FALSE	canonical	3	434	junction_2	20.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTTAAACTTGAATTTT	NA	False	NA	NA	False	ACTAAA	-9	NA	86521858	86499977	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_86500744_86517570_86518092_86521364
transcript_25315.nic	chr10	+	3737	14	NIC	ENSG00000107779.14	novel	6417	13	NA	NA	0	-2785	combination_of_known_junctions	FALSE	canonical	3	44	junction_3	132.752204987315	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGCCTTGTTATCTCAA	86747759	True	NA	2	True	AATAAA	-16	NA	86756618	86925184	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_86756920_86838864_86838980_86843405_86843511_86875866_86876086_86890061_86890225_86892126_86892230_86899793_86899891_86900026_86900127_86912239_86912385_86917133_86917327_86919171_86919470_86921519_86921696_86923375_86923507_86923593
transcript_25324.known	chr10	+	6417	13	FSM	ENSG00000107779.14	ENST00000372037.8	6417	13	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_7	42.5678380157289	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTAGTGATGTGTTTTGTG	86747759	True	NA	22	True	AGTAAA	-19	NA	86756618	86927969	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_86756920_86838864_86838980_86875866_86876086_86890061_86890225_86892126_86892230_86899793_86899891_86900026_86900127_86912239_86912385_86917133_86917327_86919171_86919470_86921519_86921696_86923375_86923507_86923593
transcript_2533.known	chr1	+	1001	7	FSM	ENSG00000120948.19	ENST00000472476.5	1001	7	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_3	561.71624410274	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATCCAATGCCGAACCTA	10992077	True	NA	-24	True	ATTAAA	-15	NA	11012653	11022176	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11012744_11013715_11013966_11016122_11016255_11016843_11017008_11018732_11018874_11020428_11020600_11022123
transcript_25334.nnic	chr10	+	3593	12	NIC	ENSG00000107779.14	novel	6417	13	NA	NA	-58	-2785	combination_of_known_splicesites	TRUE	canonical	3	23	junction_1	118.786495044507	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGCCTTGTTATCTCAA	86747683	True	NA	2	True	AATAAA	-16	NA	86756542	86925184	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_86756920_86875866_86876086_86890061_86890225_86892126_86892230_86899793_86899891_86900026_86900127_86912239_86912385_86917133_86917327_86919171_86919470_86921519_86921696_86923375_86923507_86923593
transcript_25349.known	chr10	-	4127	7	FSM	ENSG00000173269.14	ENST00000372027.10	4127	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	1.29099444873581	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCCTCATTTACTTCT	-86957558	True	NA	0	True	AATAAA	-16	NA	86957615	86935539	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_86937126_86942316_86944129_86944261_86944436_86945187_86945269_86945369_86945477_86945560_86945690_86957377
transcript_25352.nnic	chr10	+	1004	6	NNC	ENSG00000173267.14	novel	756	5	NA	NA	-2410	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	22.0181743112366	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGCTTCCTCTGGGTGC	86955943	True	NA	16	True	AATAAA	-17	NA	86956188	86963258	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_86956426_86958587_86958819_86959632_86959675_86960000_86960129_86962603_86962676_86962964
transcript_25354.known	chr10	-	502	2	FSM	ENSG00000272734.1	ENST00000440490.1	502	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCTTTCATGAGCTGAC	-86969135	False	NA	-9	True	AATGAA	-18	NA	86969178	86965738	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_86966104_86969041
transcript_25356.known	chr10	-	2205	1	FSM	ENSG00000272734.1	ENST00000609170.1	2205	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCTCAAAAAAAAAAAAAAAA	-86967506	False	NA	NA	False	NA	NA	NA	86967549	86965344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_86965300_86967500
transcript_25357.known	chr10	+	756	5	FSM	ENSG00000173267.14	ENST00000372017.4	756	5	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_3	5.30919014539883	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGCTTCCTCTGGGTGC	86958211	True	NA	16	True	AATAAA	-17	NA	86958598	86963258	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_86958819_86959632_86959675_86960000_86960129_86962603_86962676_86962964
transcript_25358.known	chr10	+	794	4	FSM	ENSG00000173267.14	ENST00000483064.1	794	4	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	4.49691252107735	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGCTTCCTCTGGGTGC	86959319	True	NA	16	True	AATAAA	-17	NA	86959374	86963258	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_86959675_86960000_86960129_86962603_86962676_86962964
transcript_25362.known	chr10	-	3300	13	FSM	ENSG00000148672.10	ENST00000277865.5	3300	13	0	0	0	0	multi-exon	TRUE	canonical	3	581	junction_10	43.7653941170672	890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTTGAGAAAGAGGCTCT	-87086218	True	NA	NA	False	ATTAAA	-15	NA	87094843	87050201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_87051871_87053341_87053405_87057690_87057783_87059149_87059274_87060160_87060242_87060687_87060826_87060914_87061053_87062655_87062836_87068062_87068158_87074550_87074615_87075967_87076024_87076575_87076657_87094324
transcript_25375.known	chr10	-	2623	11	FSM	ENSG00000148672.10	ENST00000684201.1	2623	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	198.745087989615	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTTAACCTGGTGATAAAA	-87086151	True	NA	36	True	NA	NA	NA	87094776	87050535	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_87051871_87053341_87053405_87057690_87057783_87059149_87059274_87060160_87060242_87062655_87062836_87068062_87068158_87074550_87074615_87075967_87076024_87076575_87076657_87094324
transcript_25380.known	chr10	+	3601	10	FSM	ENSG00000122376.12	ENST00000298786.5	3601	10	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_7	28.3783955383904	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTTCTTTTACTCTGTG	87092226	True	NA	6	True	AATAAA	-17	NA	87095205	87191465	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_87095249_87096933_87096990_87151349_87152880_87158047_87158156_87170477_87170673_87170839_87170975_87175888_87176096_87180074_87180304_87187084_87187201_87190483
transcript_25388.known	chr10	+	3402	9	FSM	ENSG00000122376.12	ENST00000298784.5	3402	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_6	50.8226081581809	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGCTTCTTTTACTCTG	87092216	True	NA	4	True	AATAAA	-15	NA	87095195	87191463	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_87095249_87096933_87096990_87151349_87152880_87158047_87158156_87170477_87170673_87170839_87170975_87180074_87180304_87187084_87187201_87190483
transcript_25400.known	chr10	-	662	6	FSM	ENSG00000223482.9	ENST00000451940.6	662	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	99.0583666330109	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGACTGACAAACTTCC	-87342494	False	NA	NA	False	NA	NA	NA	87342542	87203874	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_87203937_87246114_87246213_87288441_87288496_87326629_87326673_87336785_87336890_87342241
transcript_25402.nnic	chr10	-	938	6	NIC	ENSG00000223482.9	novel	5671	7	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	95.8611495862636	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTTTTGTTTTTATTTA	-87342487	False	NA	-9	True	AATAAA	-20	NA	87342535	87208167	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_87208513_87246114_87246213_87288441_87288496_87326629_87326673_87336785_87336890_87342241
transcript_25406.known	chr10	-	855	6	FSM	ENSG00000223482.9	ENST00000433530.7	916	6	61	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	95.2289871835252	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCTCAAAAAGATTGTCCA	-87342297	False	NA	NA	False	ATTAAA	-40	NA	87342345	87238397	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_87238850_87246114_87246213_87288441_87288496_87326629_87326673_87336785_87336890_87342241
transcript_25407.known	chr10	-	876	6	FSM	ENSG00000223482.9	ENST00000433920.5	876	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	97.7723887403801	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTCTATTGTTTAAAATT	-87342564	False	NA	1	True	AATAAA	-18	NA	87342612	87238666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_87238873_87246114_87246213_87288441_87288496_87326629_87326673_87336785_87336890_87342241
transcript_25408.known	chr10	-	6174	6	FSM	ENSG00000223482.9	ENST00000663113.1	6174	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	87.5588944653826	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTAAAGTTGTTGAGTGA	-87342388	False	NA	NA	False	ACTAAA	-35	NA	87342436	87240175	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_87245856_87246114_87246213_87288441_87288496_87326629_87326673_87336785_87336890_87342241
transcript_2541.known	chr1	+	4185	6	FSM	ENSG00000120948.19	ENST00000240185.8	4185	6	0	0	0	0	multi-exon	FALSE	canonical	3	1107	junction_4	60.7177074666032	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAGTGTCTGGAGTCTTA	10992077	True	NA	4	True	AATAAA	-20	NA	11012653	11025492	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11012744_11013715_11013966_11016843_11017008_11018732_11018874_11020428_11020600_11022123
transcript_25414.known	chr10	-	532	5	FSM	ENSG00000223482.9	ENST00000666515.2	536	5	0	4	0	-1	multi-exon	FALSE	canonical	2	7	junction_1	104.658969993021	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTTCTCTATTGTTTAA	-87342345	False	NA	-3	True	AATAAA	-14	NA	87342393	87238670	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_87238850_87288441_87288496_87326629_87326673_87336785_87336890_87342241
transcript_25416.known	chr10	-	1014	5	FSM	ENSG00000223482.9	ENST00000655272.2	1039	5	25	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	115.569243313262	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTTGCTTGTACAGCCT	-87342318	False	NA	NA	False	ATTAAA	-24	NA	87342366	87287958	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_87288496_87326629_87326673_87330891_87331097_87336785_87336890_87342241
transcript_25417.known	chr10	-	933	5	FSM	ENSG00000223482.9	ENST00000668676.1	933	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	110.975222459791	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTTGCTTGTACAGCCT	-87342338	False	NA	NA	False	ATTAAA	-24	NA	87342386	87287958	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_87288496_87307956_87308061_87326629_87326673_87336785_87336890_87342241
transcript_25419.known	chr10	-	1446	5	FSM	ENSG00000223482.9	ENST00000417860.7	2036	5	0	590	0	-590	multi-exon	FALSE	canonical	3	27	junction_3	99.5866456910765	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGCCACTTCATGTAACA	-87342343	False	466	NA	False	AATAAA	-17	NA	87342391	87319255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_87320200_87326629_87326673_87330891_87331097_87336785_87336890_87342241
transcript_25422.known	chr10	-	4023	4	FSM	ENSG00000223482.9	ENST00000654503.2	4041	4	18	0	1	0	multi-exon	FALSE	canonical	3	201	junction_2	28.9405520948643	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAACCATTTCACAATT	-87342340	False	NA	NA	False	NA	NA	NA	87342388	87284766	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_87288496_87326629_87326673_87336785_87336890_87342241
transcript_25424.known	chr10	-	1295	4	FSM	ENSG00000223482.9	ENST00000660726.2	1835	4	16	524	0	-522	multi-exon	FALSE	canonical	3	48	junction_1	91.3831980666517	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTAGCTTTGCAACATC	-87342329	False	466	NA	False	AATGAA	-4	NA	87342377	87319187	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_87320200_87326629_87326673_87336785_87336890_87342241
transcript_25426.known	chr10	-	3270	3	FSM	ENSG00000223482.9	ENST00000662586.1	3270	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	125.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTATTATTTACGTATGA	-87342506	False	NA	NA	False	AATAAA	-10	NA	87342554	87331961	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_87334815_87336785_87336890_87342241
transcript_25428.known	chr10	-	924	5	FSM	ENSG00000223482.9	ENST00000660454.1	924	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	105.000892853347	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCTCCAAAATCAGACAAC	-87342282	False	NA	NA	False	AATAAA	-31	NA	87342330	87307577	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_87308061_87326629_87326673_87330891_87331097_87336785_87336890_87342241
transcript_25429.known	chr10	+	651	1	FSM	ENSG00000224914.4	ENST00000664736.1	651	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGAGCCATGTTCTAGAGCA	87342896	True	NA	NA	False	AATAAA	-22	NA	87342906	87343557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_87342900_87343600
transcript_25433.known	chr10	+	2470	5	FSM	ENSG00000107789.16	ENST00000371996.9	2470	5	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_2	35.4568399607184	193	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGACTCACCTGGCAAT	87502449	True	NA	88	True	AATACA	-38	NA	87504892	87553461	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_87505553_87508335_87508534_87513123_87513222_87521035_87521170_87552081
transcript_25437.known	chr10	+	3699	13	FSM	ENSG00000198682.13	ENST00000456849.2	3699	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	51.8737784327389	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGAGTTTTTTCTGCCTG	87659228	True	NA	15	True	AATAAA	-15	NA	87659877	87747705	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_87660009_87709195_87709314_87713074_87713311_87714043_87714183_87714744_87714864_87714984_87715099_87715731_87715844_87721755_87721771_87727283_87727490_87741234_87741371_87743372_87743642_87745001_87745232_87745831
transcript_2544.known	chr1	+	1388	5	FSM	ENSG00000120948.19	ENST00000439080.6	1388	5	0	0	0	0	multi-exon	FALSE	canonical	2	84	junction_2	476.142310659324	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAAATATTGAGTGGTTG	10992076	True	NA	9	True	AAAAAG	-41	NA	11012652	11022858	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11012744_11013715_11013966_11018732_11018874_11020428_11020600_11022123
transcript_25440.known	chr10	+	3949	12	FSM	ENSG00000198682.13	ENST00000361175.8	3949	12	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_6	17.7768537409076	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGAGTTTTTTCTGCCTG	87659369	False	NA	15	True	AATAAA	-15	NA	87659612	87747705	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_87660009_87709195_87709314_87713074_87713311_87714043_87714183_87714744_87714864_87714984_87715099_87715731_87715844_87727283_87727490_87741234_87741371_87743372_87743642_87745001_87745232_87745831
transcript_2545.nic	chr1	+	342	2	ISM	ENSG00000120948.19	ENST00000613864.4	584	4	-3	4489	-2	-4489	5prime_fragment	FALSE	canonical	3	1271	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGTTACCATTTGGTTT	10992074	True	NA	10	True	NA	NA	NA	11012650	11013964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_11012744_11013715
transcript_25456.known	chr10	-	4640	10	FSM	ENSG00000138138.14	ENST00000308448.11	4640	10	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_9	76.9617509618324	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACTAAAATGTGATTGTC	-87811780	True	NA	NA	False	ATTAAA	-19	NA	87818160	87751511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_87754808_87756788_87756923_87767672_87767724_87770951_87771042_87776320_87776428_87784469_87784671_87790309_87790431_87792656_87792756_87814437_87814613_87817794
transcript_25457.known	chr10	-	4334	10	FSM	ENSG00000138138.14	ENST00000680024.1	4334	10	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_9	56.9179613214287	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACTAAAATGTGATTGTC	-87811846	True	NA	NA	False	ATTAAA	-19	NA	87818226	87751511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_87754808_87756788_87756923_87767672_87767724_87770951_87771042_87776320_87776428_87784469_87784671_87790309_87790431_87792656_87792756_87814437_87814613_87818166
transcript_25468.known	chr10	+	470	2	FSM	ENSG00000223820.5	ENST00000415212.1	470	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGGCAGCTTGTGCCTTT	87818311	False	NA	NA	False	NA	NA	NA	87818424	87819081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_87818715_87818901
transcript_2547.known	chr1	-	1260	8	FSM	ENSG00000116649.10	ENST00000376957.7	1260	8	0	0	0	0	multi-exon	FALSE	canonical	3	2586	junction_1	81.3330266527061	330	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGAGTCCTGTGTCTCC	-11040429	True	NA	-7	True	NA	NA	NA	11060018	11054588	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_11054886_11054961_11055085_11055780_11055927_11056010_11056095_11056603_11056758_11058799_11058893_11059224_11059346_11059776
transcript_25477.known	chr10	+	8515	9	FSM	ENSG00000171862.12	ENST00000371953.8	8515	9	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_2	23.054283766797	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGGTTTTAAACTTTTTAT	87858271	True	NA	6	True	ATTAAA	-21	NA	87863624	87971930	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_87864549_87894024_87894110_87925512_87925558_87931045_87931090_87933012_87933252_87952117_87952260_87957852_87958020_87960893_87961119_87965286
transcript_25488.nnic	chr10	-	1292	6	NNC	ENSG00000184719.12	novel	2409	7	NA	NA	-95	-859	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	21.996363335788	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAAGTCTTCGGATGTGT	-88583328	False	NA	-4	True	AATAAA	-26	NA	88583427	88284960	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_88285507_88314465_88314642_88362551_88362647_88523215_88523230_88582201_88582308_88583072
transcript_25489.nnic	chr10	-	1361	6	NNC	ENSG00000184719.12	novel	2409	7	NA	NA	-156	-859	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	21.996363335788	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAAGTCTTCGGATGTGT	NA	False	NA	-4	True	AATAAA	-26	NA	88583488	88284960	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_88285507_88314465_88314642_88362551_88362655_88523215_88523230_88582201_88582308_88583072
transcript_25495.known	chr10	+	2021	11	FSM	ENSG00000138134.12	ENST00000371926.8	2021	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	7.07389567353096	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCTTGTATTTATAGAG	88879713	True	NA	7	True	AATAAA	-16	NA	88880244	88923487	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_88880639_88901655_88901739_88905442_88905661_88908701_88908778_88910915_88911012_88913100_88913459_88914533_88914659_88916679_88916818_88921282_88921396_88922336_88922437_88923167
transcript_25498.known	chr10	+	1464	10	FSM	ENSG00000026103.23	ENST00000612663.5	1464	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	8.5908363467012	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTATATGCAATTAGTGT	88990548	False	NA	NA	False	AATGAA	-43	NA	88990581	89014474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_88990907_89003028_89003195_89007699_89007838_89008888_89008998_89010538_89010601_89010752_89010816_89011998_89012082_89012198_89012336_89013342_89013368_89014118
transcript_25500.known	chr10	+	3696	9	FSM	ENSG00000026103.23	ENST00000652046.1	3696	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	5.02493781056044	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTTGCTGTTGATTAT	88990767	True	NA	NA	False	ATTAAA	-15	NA	88990797	89017059	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_88990907_89003028_89003195_89007699_89007838_89008888_89008998_89010538_89010601_89010752_89010816_89011998_89012082_89013342_89013368_89014118
transcript_25505.known	chr10	+	1044	8	FSM	ENSG00000026103.23	ENST00000357339.6	1044	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	6.6944997222057	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGTGAAAAACAACAAATTCA	88990756	False	NA	NA	False	AATGAA	-19	NA	88990777	89014450	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_88990907_89003028_89003195_89007699_89007838_89008888_89008998_89010538_89010601_89011998_89012082_89013342_89013368_89014118
transcript_25506.known	chr10	+	4184	11	FSM	ENSG00000138134.12	ENST00000371927.7	4184	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	12.2898331965898	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAACTCTCA	NA	False	NA	NA	False	ATTAAA	-45	NA	88879733	88975153	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_88880639_88901655_88901739_88905442_88905661_88908701_88908778_88910915_88911012_88913100_88913459_88914533_88914659_88916679_88916818_88921282_88921396_88922336_88922437_88973181
transcript_25511.nnic	chr10	-	2554	10	NNC	ENSG00000107798.18	novel	2496	10	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_9	118.82116451122	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGTGTGTATGTTTTTT	-89247295	True	NA	-6	True	AATAAA	-26	NA	89251803	89213571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_89215062_89215937_89216010_89222510_89222583_89223683_89223831_89225091_89225229_89226894_89227005_89228199_89228399_89245675_89245794_89247537_89247650_89251706
transcript_25512.known	chr10	-	2496	10	FSM	ENSG00000107798.18	ENST00000336233.10	2496	10	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_9	25.7552583627758	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGTGTGTATGTTTTTT	-89247267	True	NA	-6	True	AATAAA	-26	NA	89251775	89213571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_89215062_89215937_89216010_89222510_89222583_89223683_89223831_89225091_89225229_89226894_89227005_89228199_89228399_89245675_89245794_89247537_89247650_89251736
transcript_25514.known	chr10	+	2390	2	FSM	ENSG00000119917.15	ENST00000371818.9	2390	2	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAGAGGTAATTGTGTGG	89327963	True	NA	NA	False	AATAAA	-23	NA	89327996	89340968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_89328079_89338660
transcript_25515.known	chr10	+	4302	2	FSM	ENSG00000185745.10	ENST00000371804.4	4302	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGGGTCTGCACTGCT	89392501	True	NA	NA	False	AATAAA	-16	NA	89392622	89406487	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_89392718_89402280
transcript_25516.known	chr10	+	4029	2	FSM	ENSG00000152778.10	ENST00000371795.5	4029	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATATTGTCCTGCACCT	NA	False	NA	NA	False	AATAAA	-17	NA	89414567	89420997	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_89414804_89417204
transcript_25524.nnic	chr10	-	4528	7	NIC	ENSG00000152779.14	novel	4655	8	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_6	14.9740516301441	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGAAAGACATTTTTCCC	-89534776	True	NA	-5	True	AATAAA	-20	NA	89535607	89430298	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_89433327_89436059_89436320_89438603_89439184_89441107_89441252_89443755_89443860_89462378_89462625_89535441
transcript_25532.known	chr10	-	4655	8	FSM	ENSG00000152779.14	ENST00000371790.5	4655	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	20.0479018190667	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGAAAGACATTTTTCCC	-89534763	True	NA	-5	True	AATAAA	-20	NA	89535594	89430298	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_89433327_89436059_89436320_89438603_89439184_89441107_89441252_89443755_89443860_89462378_89462625_89534500_89534641_89535441
transcript_25535.known	chr10	-	2703	7	FSM	ENSG00000152782.18	ENST00000342512.3	2703	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	69.4686180148194	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTAGTGTATATGTTA	-89643877	False	NA	-13	True	AATAAA	-18	NA	89643887	89582987	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_89584466_89588651_89588778_89593196_89593321_89593812_89593990_89599251_89599506_89611695_89612049_89643696
transcript_25536.known	chr10	-	3331	7	FSM	ENSG00000152782.18	ENST00000307534.10	3155	7	-176	0	-176	0	multi-exon	FALSE	canonical	3	145	junction_6	27.021082304173	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTAGTGTATATGTTA	NA	False	NA	-13	True	AATAAA	-18	NA	89645418	89582987	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_89584466_89588651_89588778_89593196_89593321_89593812_89593990_89599251_89599506_89611695_89612049_89644599
transcript_25544.nic	chr10	-	1228	2	NIC	ENSG00000152782.18	novel	572	4	NA	NA	-28	2	intron_retention	FALSE	canonical	2	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTGTTTCTATTTGTT	-89643974	False	NA	51	True	AATAAA	-22	NA	89643984	89625692	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_89626633_89643696
transcript_25545.nnic	chr10	-	1583	2	NIC	ENSG00000152782.18	novel	572	4	NA	NA	0	2	intron_retention	FALSE	canonical	3	18	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTGTTTCTATTTGTT	-89644386	True	NA	51	True	AATAAA	-22	NA	89645242	89625692	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_89626633_89644599
transcript_25548.known	chr10	+	6441	33	FSM	ENSG00000138182.15	ENST00000371728.8	6441	33	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_15	48.2739173234367	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTGTCTTTCTGTGCCT	89693328	True	NA	29	True	AATAAA	-13	NA	89701589	89774934	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_89701681_89705293_89705442_89709166_89709254_89709344_89709462_89709926_89710066_89710960_89711146_89714046_89714084_89714954_89715183_89716435_89716548_89717423_89717496_89717575_89717723_89718709_89718873_89719418_89719707_89723963_89724104_89725019_89725159_89726292_89726522_89727855_89727897_89729127_89729248_89732902_89733057_89737386_89738618_89738957_89739097_89743807_89743928_89745898_89745960_89751345_89751472_89752566_89752692_89754517_89754674_89758705_89758883_89760525_89760637_89762637_89762836_89768289_89768392_89768737_89768889_89772688_89772832_89773970
transcript_25549.nic	chr10	+	2696	20	ISM	ENSG00000138182.15	ENST00000260753.8	6306	33	-29	37383	-9	26466	5prime_fragment	FALSE	canonical	3	195	junction_17	26.078827871626	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAGAATTAAATAAACAGAT	89693319	True	NA	NA	False	AAGAAA	-3	NA	89701580	89737556	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_89701681_89705293_89705442_89709166_89709254_89709344_89709462_89709926_89710066_89710960_89711146_89714046_89714084_89714954_89715183_89716435_89716548_89717423_89717496_89717575_89717723_89718709_89718873_89719418_89719707_89723963_89724104_89725019_89725159_89726412_89726522_89727855_89727897_89729127_89729248_89732902_89733057_89737386
transcript_25554.nic	chr10	+	2478	19	ISM	ENSG00000138182.15	ENST00000260753.8	6306	33	-29	41931	-9	21918	5prime_fragment	FALSE	canonical	3	195	junction_17	26.2081530053267	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGTAAATGAAAATGAACTT	89693319	True	NA	NA	False	AAGAAA	-3	NA	89701580	89733008	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_89701681_89705293_89705442_89709166_89709254_89709344_89709462_89709926_89710066_89710960_89711146_89714046_89714084_89714954_89715183_89716435_89716548_89717423_89717496_89717575_89717723_89718709_89718873_89719418_89719707_89723963_89724104_89725019_89725159_89726412_89726522_89727855_89727897_89729127_89729248_89732902
transcript_25561.nic	chr10	+	2186	16	ISM	ENSG00000138182.15	ENST00000260753.8	6306	33	-29	48443	-9	15406	5prime_fragment	TRUE	canonical	3	207	junction_13	24.0994236906658	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGTTAAAAAAGAGAGA	89693319	True	NA	27	True	ATTAAA	-43	NA	89701580	89726496	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_89701681_89705293_89705442_89709166_89709254_89709344_89709462_89709926_89710066_89710960_89711146_89714046_89714084_89714954_89715183_89716435_89716548_89717423_89717496_89717575_89717723_89718709_89718873_89719418_89719707_89723963_89724104_89725019_89725159_89726412
transcript_25576.known	chr10	+	660	6	FSM	ENSG00000138182.15	ENST00000447580.1	660	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	103.404835476877	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAGAGAAAGAAGAAATTG	89693417	True	NA	NA	False	NA	NA	NA	89701678	89711090	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_89701718_89705293_89705442_89709166_89709254_89709344_89709462_89709926_89710066_89710960
transcript_25577.known	chr10	-	3467	4	FSM	ENSG00000148680.16	ENST00000336152.8	3467	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	23.3380947522857	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGGTCTTATGTCATAC	-90857943	False	NA	-18	True	AATAAA	-24	NA	90858039	90740822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_90742529_90743592_90743691_90748838_90749595_90857132
transcript_25579.known	chr10	-	3033	3	FSM	ENSG00000148680.16	ENST00000371719.2	3033	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	20.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGGTCTTATGTCATAC	-90857602	False	NA	-18	True	AATAAA	-24	NA	90857698	90740822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_90742529_90748833_90749595_90857132
transcript_25580.known	chr10	-	3028	3	FSM	ENSG00000148680.16	ENST00000277874.10	3028	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	14	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGGTCTTATGTCATAC	-90857602	False	NA	-18	True	AATAAA	-24	NA	90857698	90740822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_90742529_90748838_90749595_90857132
transcript_25584.known	chr10	+	2332	11	FSM	ENSG00000148688.14	ENST00000371703.8	2332	11	0	0	0	0	multi-exon	FALSE	canonical	3	583	junction_4	28.2283545393634	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCATGACCAGGTGAAATT	90862470	True	NA	12	True	AATAAA	-28	NA	90871973	90902191	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_90872069_90874868_90874925_90875557_90875615_90876023_90876099_90879062_90879135_90885811_90885902_90894774_90894892_90895453_90895484_90895879_90895918_90896312_90896393_90900569
transcript_25585.known	chr10	+	1466	10	FSM	ENSG00000148688.14	ENST00000487998.5	1466	10	0	0	0	0	multi-exon	FALSE	canonical	3	583	junction_4	27.1897765827026	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGTTTTCATTTGGAG	90862469	True	NA	12	True	AATAAA	-13	NA	90871972	90900762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_90872069_90874868_90874925_90875557_90875615_90876023_90876099_90879062_90879135_90885811_90885902_90894774_90895484_90895879_90895918_90896312_90896393_90900569
transcript_25586.known	chr10	+	7149	10	FSM	ENSG00000180628.15	ENST00000336126.6	7149	10	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_9	16.0746714345393	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTGTAGCAAATTTTATT	91219900	True	NA	86	True	ATTAAA	-21	NA	91220662	91284337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_91220837_91222688_91222984_91240483_91240581_91248504_91248561_91248664_91248725_91251291_91251441_91261325_91261425_91264430_91264521_91271637_91271698_91278268
transcript_25587.known	chr10	+	973	3	FSM	ENSG00000180628.15	ENST00000490164.1	973	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	3.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTGTGTATTTTTCCT	91220020	True	NA	NA	False	AATAAA	-35	NA	91220782	91227960	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_91220837_91222688_91222984_91227336
transcript_25588.known	chr10	+	2175	5	FSM	ENSG00000165338.17	ENST00000371681.8	2175	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	10.2591422643416	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTTTGTCTTATTCCCA	91409946	True	NA	NA	False	AATAAA	-15	NA	91410343	91463664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_91410577_91425280_91425411_91460426_91460566_91461253_91461357_91462094
transcript_25589.known	chr10	-	2541	2	FSM	ENSG00000119938.9	ENST00000238994.6	2541	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTGAGTATATTTTCTTT	-91632860	True	NA	2	True	AATAAA	-15	NA	91633071	91628441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_91630867_91632955
transcript_2559.known	chr1	-	2796	25	FSM	ENSG00000171824.14	ENST00000376936.9	2796	25	0	0	0	0	multi-exon	FALSE	canonical	3	554	junction_10	47.9402840347586	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATTCCTGACTTTTATT	-11089838	True	NA	NA	False	ATTAAA	-17	NA	11099869	11066617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_11066749_11068007_11068085_11068644_11068707_11069558_11069731_11070899_11070974_11072086_11072172_11073933_11074009_11074230_11074327_11076841_11076949_11077364_11077444_11077600_11077652_11079710_11079823_11080498_11080550_11080763_11080913_11081081_11081239_11082687_11082879_11087447_11087592_11087799_11087911_11088122_11088199_11090553_11090669_11091013_11091180_11091492_11091598_11095757_11095882_11098019_11098157_11099720
transcript_25590.known	chr10	+	6242	27	FSM	ENSG00000107854.6	ENST00000371627.5	6242	27	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_19	37.3970381385807	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTTTCAACATTTAGTC	91791682	True	NA	111	True	ATTAAA	-17	NA	91798425	91865475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_91798890_91812982_91813208_91817133_91817230_91819269_91819307_91819481_91819558_91819938_91820034_91822295_91822363_91827016_91827204_91828284_91828407_91830922_91831015_91831102_91831182_91833852_91834025_91836918_91836999_91840560_91840707_91841282_91841449_91842171_91842392_91844918_91845029_91845751_91845941_91848382_91848636_91849511_91849595_91851215_91851337_91855028_91855127_91855613_91855689_91857424_91857531_91859461_91859649_91861998_91862156_91862936
transcript_25595.nic	chr10	+	2208	16	ISM	ENSG00000107854.6	ENST00000371627.5	6242	27	-78	23278	-78	-23278	5prime_fragment	FALSE	canonical	3	253	junction_4	24.0994236906658	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGGATGGAAATACTCCTT	91798293	False	NA	NA	False	NA	NA	NA	91798347	91842197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_91798890_91812982_91813208_91817133_91817230_91819269_91819307_91819481_91819558_91819938_91820034_91822295_91822363_91827016_91827204_91828284_91828407_91830922_91831015_91831102_91831182_91833852_91834025_91836918_91836999_91840560_91840707_91841282_91841449_91842171
transcript_25596.nic	chr10	+	2800	16	ISM	ENSG00000107854.6	ENST00000371627.5	6242	27	-78	22686	-78	-22686	5prime_fragment	FALSE	canonical	3	253	junction_4	24.0994236906658	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAATCAAGTATCTTCTA	91798293	False	NA	NA	False	AATAAA	-16	NA	91798347	91842789	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_91798890_91812982_91813208_91817133_91817230_91819269_91819307_91819481_91819558_91819938_91820034_91822295_91822363_91827016_91827204_91828284_91828407_91830922_91831015_91831102_91831182_91833852_91834025_91836918_91836999_91840560_91840707_91841282_91841449_91842171
transcript_25597.nic	chr10	+	2149	15	ISM	ENSG00000107854.6	ENST00000371627.5	6242	27	-78	24060	-78	-24060	5prime_fragment	TRUE	canonical	3	253	junction_4	24.0094581703264	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAATATGAAATTTGCAA	91798293	False	NA	NA	False	NA	NA	NA	91798347	91841415	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_91798890_91812982_91813208_91817133_91817230_91819269_91819307_91819481_91819558_91819938_91820034_91822295_91822363_91827016_91827204_91828284_91828407_91830922_91831015_91831102_91831182_91833852_91834025_91836918_91836999_91840560_91840707_91841282
transcript_25599.nic	chr10	+	1419	10	ISM	ENSG00000107854.6	ENST00000371627.5	6242	27	-15	34518	-15	-34518	5prime_fragment	FALSE	canonical	3	253	junction_4	16.5514536305411	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATATGTGAACTGTTGC	91791667	True	NA	NA	False	AAGAAA	-1	NA	91798410	91830957	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_91798890_91812982_91813208_91817133_91817230_91819269_91819307_91819481_91819558_91819938_91820034_91822295_91822363_91827016_91827204_91828284_91828407_91830922
transcript_25601.known	chr10	-	2553	2	FSM	ENSG00000174721.10	ENST00000311575.6	2553	2	0	0	0	0	multi-exon	FALSE	canonical	3	690	junction_1	0	235	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTGTGTTGCAACC	-91905543	True	NA	-1	True	TATAAA	-19	NA	91909486	91906583	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_91909048_91909397
transcript_25603.known	chr10	+	7249	38	FSM	ENSG00000095564.15	ENST00000265990.12	8361	38	0	1112	0	-1112	multi-exon	FALSE	canonical	3	82	junction_9	29.5941873352208	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGCAACTGTGTGTTAT	91917932	True	NA	112	True	AATAAA	-22	NA	91923769	92030325	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_91924091_91935656_91935781_91939951_91940067_91942421_91942569_91951402_91951567_91953736_91953874_91956527_91956658_91957224_91957294_91959064_91959155_91959784_91959881_91959977_91960155_91962537_91962679_91964076_91964202_91966636_91966758_91980453_91980559_91981642_91981793_91982082_91982226_91982586_91982762_91984200_91984405_91989153_91989581_91992118_91992310_91993693_91993848_91994534_91994645_91996368_91996571_91997602_91997752_92008122_92008276_92008828_92008951_92009040_92009209_92011072_92011151_92011285_92011416_92013666_92013809_92013898_92014030_92016339_92016466_92018782_92018936_92024755_92024968_92026591_92026752_92027129_92027301_92028789
transcript_25608.nic	chr10	+	3104	20	NIC	ENSG00000095564.15	novel	8361	38	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	93	junction_9	19.82262061607	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACTAGTGCAAAACTATG	91917932	True	NA	NA	False	ATTAAA	-12	NA	91923769	91989395	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_91924091_91935656_91935781_91939951_91940067_91942421_91942569_91951402_91951567_91953736_91953874_91956527_91956658_91957224_91957294_91959064_91959283_91959784_91959881_91959977_91960155_91962537_91962679_91964076_91964202_91966636_91966758_91980453_91980559_91981642_91981793_91982082_91982226_91982586_91982762_91984200_91984405_91989153
transcript_25618.known	chr10	+	3922	6	FSM	ENSG00000198060.10	ENST00000358935.3	3922	6	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_2	20.2780669690185	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGGTGTACTTTGTTAAA	92289369	True	NA	7	True	AATAAA	-15	NA	92291166	92353964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_92291530_92311134_92311338_92340672_92340804_92349348_92349533_92349670_92349838_92351090
transcript_25624.known	chr10	-	5467	26	FSM	ENSG00000119912.18	ENST00000677096.1	5467	26	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_25	78.2380572355935	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTCACCTCTGGAGTC	-92570802	True	NA	-16	True	AATAAA	-6	NA	92574056	92452255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_92454540_92455575_92455644_92456358_92456432_92461190_92461253_92463730_92464004_92465675_92465844_92468878_92468991_92470253_92470346_92474840_92474962_92475883_92475995_92479276_92479422_92483254_92483338_92487195_92487319_92490492_92490596_92504793_92504898_92506441_92506523_92507574_92507667_92508112_92508206_92508727_92508891_92510049_92510163_92514919_92515043_92531747_92531918_92534577_92534786_92537365_92537551_92559033_92559216_92573921
transcript_25626.known	chr10	-	5433	26	FSM	ENSG00000119912.18	ENST00000678844.1	5433	26	0	0	0	0	multi-exon	TRUE	canonical	3	6	junction_11	78.6093531330719	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTACAATAAATCGCCTGAA	-92570842	True	NA	-32	True	NA	NA	NA	92574096	92452271	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_92454540_92455575_92455644_92456358_92456432_92461190_92461253_92463730_92464004_92465675_92465844_92468878_92468991_92470253_92470346_92474840_92474962_92475883_92475995_92479276_92479422_92480792_92480917_92483254_92483338_92487195_92487319_92490492_92490596_92504793_92504898_92506441_92506523_92507574_92507667_92508112_92508206_92508727_92508891_92510049_92510163_92514919_92515043_92531747_92531918_92534577_92534786_92537365_92537551_92573921
transcript_25628.known	chr10	-	5894	25	FSM	ENSG00000119912.18	ENST00000265986.11	5894	25	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_11	20.5385393156919	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTCTCAGGGACGATGT	-92570839	True	NA	NA	False	NA	NA	NA	92574093	92451683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_92454540_92455575_92455644_92456358_92456432_92461190_92461253_92463730_92464004_92465675_92465844_92468878_92468991_92470253_92470346_92474840_92474962_92475883_92475995_92479276_92479422_92483254_92483338_92487195_92487319_92490492_92490596_92504793_92504898_92506441_92506523_92507574_92507667_92508112_92508206_92508727_92508891_92510049_92510163_92514919_92515043_92531747_92531918_92534577_92534786_92537365_92537551_92573921
transcript_25630.known	chr10	-	5877	25	FSM	ENSG00000119912.18	ENST00000650060.1	5877	25	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_11	78.622339205993	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTCTCAGGGACGATGT	-92570822	True	NA	NA	False	NA	NA	NA	92574076	92451683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_92454540_92455575_92455644_92456358_92456432_92461190_92461253_92463730_92464004_92465675_92465844_92468878_92468991_92470253_92470346_92474840_92474962_92475883_92475995_92478644_92478790_92483254_92483338_92487195_92487319_92490492_92490596_92504793_92504898_92506441_92506523_92507574_92507667_92508112_92508206_92508727_92508891_92510049_92510163_92514919_92515043_92531747_92531918_92534577_92534786_92537365_92537551_92573921
transcript_25635.known	chr10	-	5749	24	FSM	ENSG00000119912.18	ENST00000679312.1	5749	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	61.838927303574	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTCTCAGGGACGATGT	-92570839	True	NA	NA	False	NA	NA	NA	92574093	92451683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_92454540_92455575_92455644_92456358_92456432_92461190_92461253_92463730_92464004_92465675_92465844_92468878_92468991_92470253_92470346_92474840_92474962_92475883_92475995_92483254_92483338_92487195_92487319_92490492_92490596_92504793_92504898_92506441_92506523_92507574_92507667_92508112_92508206_92508727_92508891_92510049_92510163_92514919_92515043_92531747_92531918_92534577_92534786_92537365_92537551_92573921
transcript_25637.known	chr10	-	5064	23	FSM	ENSG00000119912.18	ENST00000677079.1	5064	23	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	61.4121188944612	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTACCTGAGGCTTCTT	-92570842	True	NA	NA	False	AGTAAA	-23	NA	92574096	92452375	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_92454540_92461190_92461253_92463730_92464004_92465675_92465844_92468878_92468991_92470253_92470346_92474840_92474962_92475883_92475995_92479276_92479422_92483254_92483338_92487195_92487319_92490492_92490596_92504793_92504898_92506441_92506523_92507574_92507667_92508112_92508206_92508727_92508891_92510049_92510163_92514919_92515043_92531747_92531918_92534577_92534786_92537365_92537551_92573921
transcript_25640.known	chr10	-	2103	14	FSM	ENSG00000119912.18	ENST00000677196.1	2103	14	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_8	17.8289041302377	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCTACTAAAAATACAAAAAA	-92570842	True	NA	NA	False	NA	NA	NA	92574096	92482967	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_92483338_92487195_92487319_92490492_92490596_92504793_92504898_92506441_92506523_92507574_92507667_92508112_92508206_92508727_92508891_92510049_92510163_92514919_92515043_92531747_92531918_92534577_92534786_92537365_92537551_92573921
transcript_25642.known	chr10	+	5016	22	FSM	ENSG00000138160.7	ENST00000260731.5	5016	22	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_1	35.4721953646927	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTTGCTCCATAATTTC	92581090	True	NA	37	True	AATAAA	-18	NA	92593129	92655395	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_92593453_92606264_92606398_92606618_92606717_92607158_92607238_92609019_92609206_92609384_92609510_92613039_92613131_92613376_92613620_92616736_92616833_92621384_92621474_92628807_92628896_92630175_92630365_92632485_92632694_92633622_92633796_92637183_92637310_92637386_92637546_92639793_92639901_92645362_92645643_92648211_92648435_92649834_92649987_92650400_92650518_92653664
transcript_25650.nic	chr10	+	1734	12	ISM	ENSG00000138160.7	ENST00000676621.1	5134	23	-77	25112	-77	-25112	5prime_fragment	FALSE	canonical	3	244	junction_1	38.8050861452955	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAATTACAACTTGTTAAA	92581013	True	NA	NA	False	AATAAA	-41	NA	92593052	92630281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_92593453_92606264_92606398_92606618_92606717_92607158_92607238_92609019_92609206_92609384_92609510_92613039_92613131_92613376_92613620_92616736_92616833_92621384_92621474_92628807_92628896_92630175
transcript_25652.known	chr10	+	4788	22	FSM	ENSG00000138160.7	ENST00000676647.1	4788	22	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	73.9887225579658	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGCTTGCTCCATAATT	92591707	True	NA	35	True	AATAAA	-45	NA	92591732	92655393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_92591830_92606264_92606398_92606618_92606717_92607158_92607238_92609019_92609206_92609384_92609510_92613039_92613131_92613376_92613620_92616736_92616833_92621384_92621474_92628807_92628896_92630175_92630365_92632485_92632694_92633622_92633796_92637183_92637310_92637386_92637546_92639793_92639901_92645362_92645643_92648211_92648435_92649834_92649987_92650400_92650518_92653664
transcript_25653.known	chr10	+	1724	4	FSM	ENSG00000152804.11	ENST00000282728.10	1724	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	7.58653778449403	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTCTAATTCTTTGATT	92689672	True	NA	16	True	AATAAA	-28	NA	92689954	92695647	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_92690348_92692367_92692547_92692701_92692753_92694546
transcript_25654.known	chr10	+	1605	4	FSM	ENSG00000152804.11	ENST00000472590.6	1605	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	15.4560308258262	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGTTGCAAGTCTAATTCT	92691537	False	NA	10	True	AATAAA	-22	NA	92691819	92695641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_92692100_92692367_92692547_92692701_92692753_92694546
transcript_25655.known	chr10	+	3564	22	FSM	ENSG00000138190.17	ENST00000260762.10	3564	22	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_18	6.46532702303134	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTACTATTTTGTCTAT	92848024	True	NA	14	True	ATTAAA	-24	NA	92848519	93059490	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_92848635_92893348_92893521_92894793_92894842_92894929_92895021_92899598_92899645_92909426_92909632_92915757_92915914_92919981_92920051_92928338_92928423_92934143_92934191_92934309_92934431_92935813_92935886_92940726_92940825_92948273_92948380_92952272_92952383_92954629_92954742_92955579_92955715_92974052_92974233_92997473_92997616_93014193_93014268_93056923_93057037_93058222
transcript_25657.known	chr10	+	3310	18	FSM	ENSG00000138190.17	ENST00000443748.6	3310	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	10.8251277592211	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTATTTTGTCTATTCA	92847972	True	NA	17	True	ATTAAA	-27	NA	92848467	93059493	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_92848635_92893348_92893521_92894793_92894842_92894929_92895021_92899598_92899645_92909426_92909632_92915757_92915914_92928338_92928423_92940726_92940825_92948273_92948380_92952272_92952383_92954629_92954742_92955579_92955715_92974052_92974233_92997473_92997616_93014193_93014268_93056923_93057037_93058222
transcript_25658.nic	chr10	+	998	7	ISM	ENSG00000138190.17	ENST00000443748.6	3310	18	4	143463	4	0	5prime_fragment	FALSE	canonical	3	30	junction_5	2.85287379477061	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCAGAGTCAAAATGGAGT	92847976	True	NA	NA	False	AATAAA	-17	NA	92848471	92916030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_92848635_92893348_92893521_92894793_92894842_92894929_92895021_92899598_92899645_92909426_92909632_92915757
transcript_25660.known	chr10	+	2245	7	FSM	ENSG00000095596.12	ENST00000371531.5	2245	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	7.11805216802087	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCCAGAACTGTTCTCTG	NA	False	NA	NA	False	AATAAA	-16	NA	93073474	93077884	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_93073835_93074307_93074533_93074778_93075070_93075148_93075308_93075825_93075961_93076543_93076697_93076962
transcript_25662.known	chr10	+	2117	7	FSM	ENSG00000095596.12	ENST00000224356.5	2117	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	5.98377435700541	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCAGAACTGTTCTCTGA	93073845	True	NA	NA	False	AATAAA	-17	NA	93073892	93077885	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_93074124_93074307_93074533_93074778_93075070_93075148_93075308_93075825_93075961_93076543_93076697_93076962
transcript_25664.known	chr10	+	1456	6	FSM	ENSG00000095596.12	ENST00000624589.3	1456	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.3072789813801	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAAATTTGAAGGTACTT	93074264	False	NA	NA	False	ATTAAA	-29	NA	93074311	93077479	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_93074533_93074798_93075070_93075148_93075308_93075825_93075961_93076543_93076697_93076962
transcript_25666.nnic	chr10	+	2568	9	NNC	ENSG00000138180.16	novel	2658	9	NA	NA	-59	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	31.9234925250982	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTAGTGTATTCGTGT	93493754	True	NA	6	True	AATAAA	-18	NA	93496552	93529092	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_93496924_93500039_93500086_93503112_93503389_93506987_93507057_93515404_93515556_93516934_93517249_93518876_93518949_93519681_93519808_93527949
transcript_25667.known	chr10	+	2658	9	FSM	ENSG00000138180.16	ENST00000371485.8	2658	9	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	16.7252615824088	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTAGTGTATTCGTGT	93493813	True	NA	6	True	AATAAA	-18	NA	93496611	93529092	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_93496924_93500039_93500235_93503112_93503389_93506987_93507057_93515404_93515556_93516934_93517249_93518876_93518949_93519681_93519808_93527949
transcript_25669.nnic	chr10	+	2403	9	NNC	ENSG00000138180.16	novel	2658	9	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	37.4681114415979	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTAGTGTATTCGTGT	93493777	True	NA	6	True	AATAAA	-18	NA	93496575	93529092	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_93496782_93500039_93500086_93503112_93503389_93506987_93507057_93515404_93515556_93516934_93517249_93518876_93518949_93519681_93519808_93527949
transcript_25670.nnic	chr10	+	2552	9	NNC	ENSG00000138180.16	novel	2658	9	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	27.3424463974971	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTAGTGTATTCGTGT	93493777	True	NA	6	True	AATAAA	-18	NA	93496575	93529092	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_93496782_93500039_93500235_93503112_93503389_93506987_93507057_93515404_93515556_93516934_93517249_93518876_93518949_93519681_93519808_93527949
transcript_25679.known	chr10	-	1314	6	FSM	ENSG00000138207.15	ENST00000371467.5	1314	6	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	1.72046505340853	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGAAGTTTCCTCTTTA	NA	False	NA	NA	False	ATTAAA	-24	NA	93601663	93591686	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_93592113_93593822_93594036_93600392_93600500_93600666_93600804_93600917_93601047_93601361
transcript_25680.known	chr10	-	3109	14	FSM	ENSG00000148690.12	ENST00000359204.5	3109	14	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_13	30.9083393890222	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACTTGTAGTGTGTAAAAA	-93698427	True	NA	NA	False	AATAAA	-19	NA	93702592	93667882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_93669869_93670769_93670849_93676652_93676692_93681479_93681599_93684055_93684099_93685245_93685360_93687403_93687450_93692008_93692094_93692645_93692730_93694860_93694938_93698135_93698182_93698300_93698397_93700029_93700107_93702374
transcript_25703.known	chr10	+	726	4	FSM	ENSG00000176273.15	ENST00000605679.5	726	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	10.8730042868667	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTACAGAATGTATTAGTC	93892876	True	NA	NA	False	AATAAA	-28	NA	93894000	93954256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_93894212_93906251_93906386_93912666_93912800_93954008
transcript_2571.nnic	chr1	-	2766	24	NIC	ENSG00000171824.14	novel	2796	25	NA	NA	-49	0	combination_of_known_splicesites	FALSE	canonical	3	38	junction_9	130.843995768753	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATTCCTGACTTTTATT	-11099907	False	NA	NA	False	ATTAAA	-17	NA	11099918	11066617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_11066749_11068007_11068085_11068644_11068707_11069558_11069731_11070899_11070974_11072086_11072172_11073933_11074009_11074230_11074327_11076841_11076949_11077600_11077652_11079710_11079823_11080498_11080550_11080763_11080913_11081081_11081239_11082687_11082879_11087447_11087592_11087799_11087911_11088122_11088199_11090553_11090669_11091013_11091180_11091492_11091598_11095757_11095882_11098019_11098157_11099720
transcript_25710.known	chr10	+	3488	3	FSM	ENSG00000176273.15	ENST00000427197.2	3488	3	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_1	12	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGGTTGTTATGATTA	93892853	True	NA	NA	False	AATAAA	-20	NA	93893977	93903824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_93894212_93898570_93898752_93900751
transcript_25714.known	chr10	+	3036	3	FSM	ENSG00000176273.15	ENST00000483386.5	3036	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGACTCTATGTTTTTGGT	93892866	True	NA	NA	False	AATAAA	-20	NA	93893990	93909830	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_93894161_93906251_93906386_93907098
transcript_25718.known	chr10	-	3455	21	FSM	ENSG00000173145.11	ENST00000371361.3	3455	21	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_14	21.817653402692	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGTGATATGATAATTT	-94358081	True	NA	-2	True	AATAAA	-25	NA	94362939	94333225	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_94334306_94334633_94334719_94337776_94337875_94338607_94338737_94339738_94339921_94340275_94340348_94340432_94340497_94341672_94341746_94344414_94344516_94344852_94344934_94346424_94346557_94349249_94349379_94350112_94350289_94352309_94352404_94352895_94353058_94354962_94355094_94356534_94356592_94357173_94357332_94358082_94358216_94361664_94361873_94362829
transcript_2572.known	chr1	-	2721	24	FSM	ENSG00000171824.14	ENST00000304457.11	2721	24	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	135.895726177076	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATTCCTGACTTTTATT	-11089838	True	NA	NA	False	ATTAAA	-17	NA	11099869	11066617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_11066749_11068007_11068085_11068644_11068707_11069558_11069731_11070899_11070974_11072086_11072172_11074230_11074327_11076841_11076949_11077364_11077444_11077600_11077652_11079710_11079823_11080498_11080550_11080763_11080913_11081081_11081239_11082687_11082879_11087447_11087592_11087799_11087911_11088122_11088199_11090553_11090669_11091013_11091180_11091492_11091598_11095757_11095882_11098019_11098157_11099720
transcript_25724.nic	chr10	-	1505	11	ISM	ENSG00000173145.11	ENST00000371361.3	3455	21	-66	13250	-46	0	5prime_fragment	FALSE	canonical	3	195	junction_4	18.2945347030199	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATGACTTTCAAAGAAAA	-94358147	True	NA	47	True	AATAAA	-10	NA	94363005	94346475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_94346557_94349249_94349379_94350112_94350289_94352309_94352404_94352895_94353058_94354962_94355094_94356534_94356592_94357173_94357332_94358082_94358216_94361664_94361873_94362829
transcript_25729.nic	chr10	-	859	6	ISM	ENSG00000173145.11	ENST00000371361.3	3455	21	-66	21741	-46	6357	5prime_fragment	FALSE	canonical	3	212	junction_3	8.58836422143355	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTAGGTAGTATTAATT	-94358147	True	NA	NA	False	NA	NA	NA	94363005	94354966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_94355094_94356534_94356592_94357173_94357332_94358082_94358216_94361664_94361873_94362829
transcript_2573.nic	chr1	-	2659	24	ISM	ENSG00000171824.14	ENST00000376936.9	2796	25	-49	1445	-49	582	5prime_fragment	FALSE	canonical	3	554	junction_9	42.7975406957342	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACAGTCGGTGGGAAAC	-11099907	False	NA	NA	False	NA	NA	NA	11099918	11068062	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_11068085_11068644_11068707_11069558_11069731_11070899_11070974_11072086_11072172_11073933_11074009_11074230_11074327_11076841_11076949_11077364_11077444_11077600_11077652_11079710_11079823_11080498_11080550_11080763_11080913_11081081_11081239_11082687_11082879_11087447_11087592_11087799_11087911_11088122_11088199_11090553_11090669_11091013_11091180_11091492_11091598_11095757_11095882_11098019_11098157_11099720
transcript_25730.nic	chr10	-	797	6	ISM	ENSG00000173145.11	ENST00000371361.3	3455	21	-66	21803	-46	6295	5prime_fragment	FALSE	canonical	3	212	junction_3	8.58836422143355	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACAGGAGAAGAAGATGCA	-94358147	True	NA	NA	False	AAGAAA	-1	NA	94363005	94355028	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_94355094_94356534_94356592_94357173_94357332_94358082_94358216_94361664_94361873_94362829
transcript_25733.nic	chr10	-	576	4	ISM	ENSG00000173145.11	ENST00000371361.3	3455	21	-66	24047	-46	4051	5prime_fragment	FALSE	canonical	3	212	junction_1	10.0332779621949	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCAAGAACTCTGCAAACT	-94358147	True	NA	NA	False	GATAAA	-11	NA	94363005	94357272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_94357332_94358082_94358216_94361664_94361873_94362829
transcript_25735.known	chr10	+	5637	13	FSM	ENSG00000108239.9	ENST00000225235.5	5637	13	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	1.83143841465299	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTTAGAAAAAAAAATGCTG	94402407	True	NA	NA	False	TTTAAA	-4	NA	94402540	94536332	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_94403585_94441895_94442020_94474667_94474784_94493364_94493448_94497054_94497173_94500220_94500328_94507266_94507348_94510090_94510180_94511582_94511655_94521954_94522084_94522343_94522454_94531201_94531461_94533027
transcript_25737.nic	chr10	+	1471	4	ISM	ENSG00000108239.9	ENST00000225235.5	5637	13	-104	42885	-104	-39850	5prime_fragment	FALSE	canonical	3	13	junction_1	2.62466929133727	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTATAAAATTTAACTCCAAA	94402303	True	NA	NA	False	NA	NA	NA	94402436	94493447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_94403585_94441895_94442020_94474667_94474784_94493364
transcript_25744.nic	chr10	+	3122	22	NIC	ENSG00000119969.15	novel	3128	22	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	190	junction_1	86.3166401007166	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCATTAAATTATTTCTT	94501712	True	NA	19	True	AATAAA	-17	NA	94545747	94602098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_94545908_94546376_94546499_94554125_94554249_94558138_94558196_94562690_94562728_94562811_94562877_94571387_94571430_94573959_94574188_94574553_94574737_94576661_94576806_94581325_94581523_94582962_94583060_94588228_94588391_94590412_94590553_94590637_94590777_94592228_94592313_94592394_94592515_94593498_94593616_94594694_94594855_94596859_94596957_94597034_94597112_94601527
transcript_25755.nic	chr10	+	514	6	ISM	ENSG00000119969.15	ENST00000419900.5	711	8	-42	11280	-40	5630	5prime_fragment	FALSE	canonical	3	190	junction_1	137.943466681101	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAGAGAAGATGAATCA	94501712	True	NA	-38	True	AATAAA	-30	NA	94545747	94562826	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_94545908_94546376_94546499_94554125_94554249_94558138_94558196_94562690_94562728_94562811
transcript_25756.nic	chr10	+	499	5	ISM	ENSG00000119969.15	ENST00000419900.5	711	8	-42	11379	-40	5531	5prime_fragment	FALSE	canonical	3	190	junction_1	152.427851785689	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATATCCTTATTCTAGT	94501712	True	NA	18	True	NA	NA	NA	94545747	94562727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_94545908_94546376_94546499_94554125_94554249_94558138_94558196_94562690
transcript_25759.nic	chr10	+	406	3	ISM	ENSG00000119969.15	ENST00000419900.5	711	8	-42	19857	-40	-2947	5prime_fragment	FALSE	canonical	3	190	junction_1	190	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTATATGTAACTGACTA	94501712	True	NA	41	True	NA	NA	NA	94545747	94554249	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_94545908_94546376_94546499_94554125
transcript_25762.known	chr10	+	400	4	FSM	ENSG00000119969.15	ENST00000630929.2	400	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	234.762764414537	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTGTGCAAATTGAGAG	94501780	True	NA	NA	False	NA	NA	NA	94545815	94557196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_94545953_94546376_94546499_94554125_94554249_94557178
transcript_25763.known	chr10	+	3128	22	FSM	ENSG00000119969.15	ENST00000348459.10	3128	22	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_1	55.2419538882157	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATTAAATTATTTCTTC	94501752	True	NA	20	True	AATAAA	-18	NA	94545787	94602099	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_94545953_94546376_94546499_94554125_94554249_94558138_94558196_94562690_94562728_94562811_94562877_94571387_94571430_94573959_94574188_94574553_94574737_94576661_94576806_94581325_94581523_94582962_94583060_94588228_94588391_94590412_94590553_94590637_94590777_94592228_94592313_94592394_94592515_94593498_94593616_94594694_94594855_94596859_94596957_94597034_94597112_94601527
transcript_25765.known	chr10	-	1431	7	FSM	ENSG00000107438.9	ENST00000329399.7	1431	7	0	0	0	0	multi-exon	FALSE	canonical	3	1037	junction_2	105.588430553099	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTGGTGTCTGTTATC	-95270658	True	NA	-4	True	AATAAA	-16	NA	95291003	95237571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_95238112_95238567_95238686_95247214_95247367_95263863_95264064_95268777_95268863_95271632_95271785_95290819
transcript_25766.known	chr10	-	850	6	FSM	ENSG00000107438.9	ENST00000477757.5	850	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_5	486.408305850137	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATCAAATCTACTGTGAGA	-95270667	True	NA	NA	False	NA	NA	NA	95291012	95238009	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_95238112_95238567_95238686_95247214_95247367_95263863_95264064_95268777_95268863_95290819
transcript_25774.known	chr10	-	5927	25	FSM	ENSG00000095637.23	ENST00000371249.6	5927	25	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_17	16.5125688660352	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTGTTCTGGTCATTC	-95557542	True	NA	-6	True	AATAAA	-23	NA	95561378	95311772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_95315127_95318319_95318433_95321962_95322022_95339132_95339328_95341284_95341411_95341563_95341679_95346405_95346453_95354881_95354968_95357630_95357804_95367649_95367700_95381684_95381800_95383984_95384115_95384237_95384286_95397219_95397284_95399016_95399190_95406117_95406148_95410632_95410778_95414493_95414863_95421960_95422074_95422189_95422217_95432447_95432577_95437489_95437556_95441125_95441181_95491034_95491121_95561319
transcript_25797.known	chr10	-	3337	18	FSM	ENSG00000059573.9	ENST00000371221.3	3337	18	0	0	0	0	multi-exon	TRUE	canonical	3	103	junction_12	161.334165020209	1244	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCCTGTGCGTGATTGA	-95648529	True	NA	-15	True	AATAAA	-11	NA	95656706	95605944	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_95606944_95610196_95610293_95611255_95611443_95613741_95613864_95613965_95614162_95616476_95616615_95621030_95621252_95625361_95625456_95626702_95626777_95627441_95627587_95628367_95628493_95632958_95633050_95633496_95633650_95637092_95637198_95637286_95637437_95642991_95643207_95653289_95653406_95656596
transcript_25825.known	chr10	-	2552	14	FSM	ENSG00000119977.22	ENST00000614499.5	2552	14	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_4	75.9139188615835	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTGTACTAATTCCAGC	NA	False	NA	-35	True	AATAAA	-14	NA	95693989	95663413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_95664301_95680471_95680610_95682650_95682805_95683100_95683181_95683521_95683630_95684498_95684625_95685555_95685637_95686494_95686531_95687043_95687160_95687246_95687356_95687591_95687720_95692919_95693039_95693352_95693477_95693643
transcript_25829.known	chr10	-	2364	13	FSM	ENSG00000119977.22	ENST00000679984.1	2364	13	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_9	133.716324940359	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGTTCATTGTGAGGAAAAA	-95689679	True	NA	33	True	NA	NA	NA	95693947	95663450	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_95664301_95680471_95680610_95682650_95682805_95683100_95683181_95683521_95683630_95684498_95684625_95685555_95685637_95686494_95686531_95687043_95687160_95687591_95687720_95692919_95693039_95693352_95693477_95693643
transcript_25830.known	chr10	-	2414	13	FSM	ENSG00000119977.22	ENST00000680144.1	2414	13	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_6	124.444850569774	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAGCAGCATGGTAGAAG	-95689651	True	NA	-22	True	AATAAA	-27	NA	95693919	95663400	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_95664301_95680471_95680610_95682650_95682805_95683100_95683181_95683521_95683630_95684498_95684625_95686494_95686531_95687043_95687160_95687246_95687356_95687591_95687720_95692919_95693039_95693352_95693477_95693643
transcript_25835.known	chr10	-	2858	13	FSM	ENSG00000119977.22	ENST00000681739.1	2858	13	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_10	44.1905595750445	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTGTACTAATTCCAGC	-95689686	True	NA	-35	True	AATAAA	-14	NA	95693954	95663413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_95664301_95680471_95680610_95682650_95682805_95683100_95683630_95684498_95684625_95685555_95685637_95686494_95686531_95687043_95687160_95687246_95687356_95687591_95687720_95692919_95693039_95693352_95693477_95693643
transcript_25836.known	chr10	-	2235	12	FSM	ENSG00000119977.22	ENST00000680709.1	2235	12	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_9	136.357454405327	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCATTGTGAGGAAAAATAAA	-95689674	True	NA	37	True	NA	NA	NA	95693942	95663446	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_95664301_95680471_95680610_95682650_95682805_95683100_95683181_95683521_95683630_95684498_95684625_95685555_95685637_95686494_95686531_95687043_95687160_95692919_95693039_95693352_95693477_95693643
transcript_25844.known	chr10	-	557	3	FSM	ENSG00000119977.22	ENST00000478245.1	557	3	0	0	0	0	multi-exon	FALSE	canonical	3	475	junction_1	6.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCCTGGCCCACATTGG	-95689633	True	NA	NA	False	NA	NA	NA	95693901	95692863	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_95693039_95693352_95693477_95693643
transcript_25847.known	chr10	-	2457	5	FSM	ENSG00000226688.8	ENST00000414006.2	2457	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	29.6015202312314	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTTTGTTTCCAGTCTC	-95906812	True	NA	-21	True	ATTAAA	-1	NA	95907842	95873760	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_95875667_95876517_95876661_95897557_95897680_95904829_95904936_95907662
transcript_25848.known	chr10	-	864	5	FSM	ENSG00000226688.8	ENST00000452942.6	864	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	27.6134025429682	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAATTTCTAAGCAGCAA	-95906852	True	NA	NA	False	NA	NA	NA	95907882	95875281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_95875667_95876517_95876661_95897557_95897680_95904829_95904939_95907777
transcript_25854.known	chr10	-	2366	4	FSM	ENSG00000226688.8	ENST00000449419.6	2366	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	29.8477618740315	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAAGTCCAATTAAACCC	-95906860	True	NA	-38	True	NA	NA	NA	95907890	95873777	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_95875667_95876517_95876661_95904829_95904936_95907662
transcript_25859.known	chr10	-	3965	3	FSM	ENSG00000226688.8	ENST00000657446.1	3965	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	4	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACAAAATCCCTGGGTAA	-95907469	False	NA	-52	True	ATTAAA	-18	NA	95907903	95873045	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_95876661_95904829_95904939_95907662
transcript_25860.known	chr10	-	1036	3	FSM	ENSG00000226688.8	ENST00000667309.1	1036	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	35.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGATGCAGTAGAAAAGAAA	-95907744	False	NA	NA	False	CATAAA	-21	NA	95908178	95875174	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_95875667_95876517_95876661_95907777
transcript_25864.known	chr10	-	3878	3	FSM	ENSG00000226688.8	ENST00000669099.1	3878	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	16.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTAAATTTTGAGATGC	-95907469	False	NA	-24	True	ATTAAA	-40	NA	95907903	95873017	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_95876661_95904829_95904939_95907777
transcript_25866.known	chr10	+	3959	6	FSM	ENSG00000107443.16	ENST00000465148.3	3959	6	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_4	6.16441400296898	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTCGGTATTTTTGTTT	96040025	True	NA	NA	False	AATAAA	-18	NA	96043582	96060870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_96043720_96044352_96044463_96050255_96050467_96056700_96057001_96057087_96057248_96057829
transcript_25868.known	chr10	+	2830	6	FSM	ENSG00000107443.16	ENST00000403870.7	2830	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	62.7037478943643	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGGAGAAGAAAGATTTGG	NA	False	NA	NA	False	GATAAA	-24	NA	96043393	96059588	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_96043720_96044352_96044463_96050255_96050467_96056700_96057001_96057123_96057248_96057829
transcript_25899.nic	chr10	-	2018	13	ISM	ENSG00000095587.9	ENST00000357947.4	6769	21	-57	30585	-57	0	5prime_fragment	FALSE	canonical	3	22	junction_4	12.782366325876	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGGGTATGAATTAGCAG	-96513973	False	NA	-11	True	AATAAA	-23	NA	96513983	96395192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_96395383_96395874_96396021_96397185_96397303_96405231_96405335_96410358_96410475_96413191_96413317_96420955_96421062_96422548_96422728_96428630_96428749_96432806_96432963_96446090_96446169_96480348_96480460_96513510
transcript_25904.nic	chr10	-	1799	12	NIC	ENSG00000095587.9	novel	1887	13	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_9	14.2602725044379	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGGGTATGAATTAGCAG	-96513290	True	NA	-11	True	AATAAA	-23	NA	96513920	96395192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_96395383_96395874_96396021_96397185_96397303_96405231_96405335_96410358_96410475_96413191_96413317_96420955_96421062_96422548_96422728_96428630_96428749_96446090_96446169_96480348_96480460_96513510
transcript_25910.nic	chr10	-	1441	5	ISM	ENSG00000095587.9	ENST00000357947.4	6769	21	-57	63518	-57	-32933	5prime_fragment	FALSE	canonical	3	45	junction_2	4.76313972081441	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTCATGTTGGATCAAA	-96513973	False	NA	2	True	AATAAA	-29	NA	96513983	96428125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_96428749_96432806_96432963_96446090_96446169_96480348_96480460_96513510
transcript_25918.known	chr10	-	6250	15	FSM	ENSG00000077147.16	ENST00000649367.1	6250	15	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_14	505.370226988621	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAAATGTACTTCCTTTG	-96586541	False	NA	-21	True	AATAAA	-2	NA	96586594	96518120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_96522331_96527212_96527290_96527412_96527497_96528030_96528178_96530539_96530609_96533050_96533191_96544075_96544207_96547894_96547990_96551244_96551412_96552927_96553060_96559658_96559737_96561977_96562139_96565303_96565427_96576633_96576830_96586154
transcript_25919.known	chr10	-	6100	15	FSM	ENSG00000077147.16	ENST00000371142.9	6100	15	0	0	0	0	multi-exon	FALSE	canonical	3	1391	junction_10	190.362811494262	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTTTGGATTCCTTATT	-96574397	True	NA	-10	True	AATAAA	-13	NA	96587012	96518109	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_96522331_96527212_96527290_96527412_96527497_96528030_96528178_96530539_96530609_96533050_96533191_96544075_96544207_96547894_96547990_96551244_96551412_96552927_96553060_96559658_96559737_96561977_96562139_96565303_96565427_96576633_96576830_96586733
transcript_25938.known	chr10	-	4800	17	FSM	ENSG00000155629.15	ENST00000339364.10	4800	17	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_4	4.11551940828858	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCCTTGTCTCGTGAATG	-96720331	True	NA	-1	True	TATAAA	-37	NA	96720514	96593314	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_96595635_96602279_96602399_96603978_96604050_96609711_96609868_96616638_96616712_96620351_96620558_96623471_96623538_96626707_96626906_96628397_96628494_96645472_96645663_96648658_96648856_96651247_96651381_96651508_96651652_96652697_96652843_96656797_96656935_96709566_96709984_96720381
transcript_25940.known	chr10	+	612	1	FSM	ENSG00000236552.2	ENST00000439189.1	612	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCAATAAAGACTGTTAAT	96749995	True	NA	NA	False	AATACA	-36	NA	96750287	96750899	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_96750300_96750900
transcript_25944.known	chr10	+	4853	9	FSM	ENSG00000196233.14	ENST00000676187.1	4853	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	15.7460312459997	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTTTGAATTTCATGAG	96828954	True	NA	NA	False	NA	NA	NA	96832259	96958865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_96832400_96833405_96833480_96833776_96833842_96907264_96907331_96907667_96907748_96944112_96944246_96949007_96949296_96952102_96952197_96954952
transcript_25950.known	chr10	+	10342	8	FSM	ENSG00000196233.14	ENST00000371103.8	10342	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	10.3351984272491	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAGCTTGGTTTCTACT	96828976	True	NA	13	True	AATAAA	-21	NA	96832281	96964441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_96832400_96833405_96833480_96907264_96907331_96907667_96907748_96944112_96944246_96949007_96949296_96952102_96952197_96954952
transcript_25954.known	chr10	+	16001	8	FSM	ENSG00000196233.14	ENST00000421806.4	16001	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_7	9.36559051604786	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTCTGTGTAGTCACTG	96828992	True	NA	19	True	ATTAAA	-17	NA	96832297	96995956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_96832400_96833405_96833480_96907264_96907331_96907667_96907748_96944112_96944246_96949007_96949296_96952102_96952197_96980792
transcript_25957.known	chr10	+	4834	8	FSM	ENSG00000196233.14	ENST00000356016.7	4834	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	14.8131215963608	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAACTTAAAAA	96832668	True	NA	NA	False	NA	NA	NA	96832954	96958891	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_96833115_96833405_96833480_96907264_96907331_96907667_96907748_96944112_96944246_96949007_96949296_96952102_96952197_96954952
transcript_25959.known	chr10	+	10311	8	FSM	ENSG00000196233.14	ENST00000674725.1	10311	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.3223859174765	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAGCTTGGTTTCTACT	96832745	False	NA	13	True	AATAAA	-21	NA	96833031	96964441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_96833119_96833405_96833480_96907264_96907331_96907667_96907748_96944112_96944246_96949007_96949296_96952102_96952197_96954952
transcript_25964.known	chr10	+	4717	7	FSM	ENSG00000196233.14	ENST00000676123.1	4717	7	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_1	13.8894444333338	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCAAAAAAGAAAAACTTAAA	96828975	True	NA	NA	False	NA	NA	NA	96832280	96958889	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_96832400_96907264_96907331_96907667_96907748_96944112_96944246_96949007_96949296_96952102_96952197_96954952
transcript_25973.known	chr10	+	4661	7	FSM	ENSG00000196233.14	ENST00000675971.1	4661	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	16.3851219776425	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTTTGAATTTCATGAG	96832745	False	NA	NA	False	NA	NA	NA	96833031	96958865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_96833119_96907264_96907331_96907667_96907748_96944112_96944246_96949007_96949296_96952102_96952197_96954952
transcript_25977.known	chr10	+	4760	7	FSM	ENSG00000196233.14	ENST00000675125.1	4760	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	16.3851219776425	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCATGAGCCTCTCAAAAAA	96832662	True	NA	NA	False	NA	NA	NA	96832948	96958877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_96833123_96907264_96907331_96907667_96907748_96944112_96944246_96949007_96949296_96952102_96952197_96954952
transcript_25978.known	chr10	-	7964	37	FSM	ENSG00000187122.17	ENST00000266058.9	7964	37	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	2.54390460066488	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTGGTCTCTTTTTCTC	-97185931	False	NA	0	True	NA	NA	NA	97185959	96998037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_97001351_97002157_97002370_97002703_97002993_97004067_97004223_97004692_97004824_97006482_97006721_97010992_97011131_97013740_97013835_97014018_97014159_97018585_97018684_97018982_97019108_97021249_97021414_97030756_97030829_97031605_97031678_97034470_97034543_97037697_97037767_97039987_97040121_97042900_97043068_97043369_97043514_97046653_97046798_97046990_97047066_97047689_97047835_97047972_97047997_97048954_97049119_97056320_97056465_97057209_97057282_97059459_97059532_97060086_97060159_97060639_97060788_97063454_97063619_97064167_97064240_97064804_97064877_97066014_97066087_97157817_97157890_97163379_97163452_97164818_97164891_97185477
transcript_25980.nic	chr10	-	800	5	ISM	ENSG00000213390.11	ENST00000358308.7	5390	11	14	37298	14	-44	5prime_fragment	FALSE	canonical	3	308	junction_3	23.636571240347	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGACAAGAACAAGATGTC	-97287840	True	NA	NA	False	AAGAAA	-1	NA	97292659	97259473	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_97259629_97263419_97263630_97264825_97264907_97265859_97266126_97292571
transcript_25981.known	chr10	-	5438	12	FSM	ENSG00000213390.11	ENST00000358531.9	5438	12	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_7	26.4990253991998	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGAGGATTTGACTGGTC	-97287818	True	NA	-8	True	ATTAAA	-17	NA	97292637	97222178	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_97226133_97229146_97229226_97229763_97229875_97235216_97235316_97243967_97244160_97246271_97246338_97256317_97256405_97259401_97259629_97263419_97263630_97264825_97264907_97265859_97266126_97292571
transcript_25985.known	chr10	-	5390	11	FSM	ENSG00000213390.11	ENST00000358308.7	5390	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	97.4774332858637	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGATTTGACTGGTCTAT	-97287854	True	NA	-5	True	ATTAAA	-20	NA	97292673	97222175	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_97226133_97229146_97229226_97229763_97229875_97235216_97235316_97243967_97244160_97246271_97246338_97259401_97259629_97263419_97263630_97264825_97264907_97265859_97266126_97292571
transcript_25991.known	chr10	+	2645	1	FSM	ENSG00000165879.9	ENST00000371021.5	2645	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGCCTGGCTTGTGGAT	97318797	True	NA	12	True	CATAAA	-22	NA	97319270	97321915	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_97319300_97321900
transcript_25992.known	chr10	+	805	2	FSM	ENSG00000225850.4	ENST00000445808.4	806	2	0	1	0	-1	multi-exon	FALSE	canonical	3	30	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATATGACCCAGTAATTCC	97334551	False	NA	NA	False	ATTAAA	-23	NA	97334563	97343203	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_97334972_97342806
transcript_25993.known	chr10	-	2233	1	FSM	ENSG00000181274.7	ENST00000371019.4	2233	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGGTTTGGCATTTTGGT	-97330697	True	NA	-2	True	AATAAA	-19	NA	97334729	97332496	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_97332500_97334700
transcript_25995.known	chr10	-	4476	35	FSM	ENSG00000052749.14	ENST00000536831.5	4476	35	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_34	57.5711985855288	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTCTAGAAACTGTT	-97425994	True	NA	-12	True	AATAAA	-17	NA	97426074	97356700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_97357197_97358536_97358620_97358942_97359011_97360545_97360619_97363853_97363904_97366107_97366234_97366445_97366622_97366741_97366910_97367040_97367133_97369424_97369583_97370166_97370275_97370454_97370561_97370715_97370797_97370922_97371082_97372072_97372167_97372735_97372804_97373045_97373201_97373574_97373738_97373829_97373895_97379292_97379415_97379627_97379771_97380798_97380914_97381385_97381484_97381714_97381827_97385165_97385258_97385894_97385994_97388251_97388380_97388488_97388625_97390422_97390540_97390738_97390845_97393683_97393761_97396217_97396302_97400304_97400535_97401092_97401369_97426022
transcript_25997.known	chr10	-	4038	31	FSM	ENSG00000052749.14	ENST00000315563.10	4038	31	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_28	61.1565931759519	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTTTTCTAGAAACTGT	-97397644	True	NA	-13	True	AATAAA	-16	NA	97401283	97356701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_97357197_97358536_97358620_97358942_97359011_97360545_97360619_97363853_97363904_97366107_97366234_97366445_97366622_97366741_97366910_97367040_97367133_97369424_97369583_97370166_97370275_97370454_97370561_97370715_97370797_97370922_97371082_97372072_97372167_97372735_97372804_97373045_97373201_97373574_97373738_97373829_97373895_97379292_97379415_97379627_97379771_97380798_97380914_97381385_97381484_97381714_97381827_97385165_97385258_97385894_97385994_97388251_97388380_97388488_97388625_97396217_97396302_97400304_97400535_97401092
transcript_26.known	ERCC-00069	+	1121	1	FSM	ERCC-00069A	DQ459421	1121	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00069_+_0_1100
transcript_26000.known	chr10	+	1802	4	FSM	ENSG00000171314.9	ENST00000334828.6	1802	4	0	0	0	0	multi-exon	FALSE	canonical	3	9259	junction_3	341.060112003735	4346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGTGATGTGGAAGAC	97367476	True	NA	1	True	AATAAA	-20	NA	97426190	97433444	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_97426447_97430378_97430654_97430954_97431136_97432354
transcript_26004.known	chr10	+	1187	4	FSM	ENSG00000171314.9	ENST00000467867.1	1187	4	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	4365.83404275619	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACCCACTCCCTTCATAC	97368819	False	NA	NA	False	NA	NA	NA	97427533	97432690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_97427929_97430378_97430654_97430954_97431136_97432354
transcript_26012.known	chr10	-	642	9	FSM	ENSG00000171311.13	ENST00000471049.5	642	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	341.854661186593	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCATCAGCTGGTGTGAG	-97434911	True	NA	NA	False	NA	NA	NA	97445973	97436539	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_97436552_97437190_97437276_97437699_97437751_97438662_97438704_97441170_97441260_97443236_97443312_97445452_97445607_97445731_97445848_97445954
transcript_26014.known	chr10	-	1145	8	FSM	ENSG00000171311.13	ENST00000370902.8	1145	8	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_7	67.5610079551687	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGAGTTGGGTTGAAGTC	-97434944	True	NA	NA	False	NA	NA	NA	97446006	97435908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_97436552_97437190_97437276_97437699_97437751_97438669_97438704_97441170_97441260_97443236_97443312_97445731_97445848_97445954
transcript_26016.known	chr10	-	718	7	FSM	ENSG00000171311.13	ENST00000370885.8	718	7	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	246.428319530582	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAGGCACCAACAAACAAAA	-97434931	True	NA	33	True	AATAAA	-12	NA	97445993	97436247	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_97436552_97437190_97437276_97437699_97437751_97438669_97438704_97441170_97441260_97445731_97445848_97445954
transcript_26019.known	chr10	-	739	4	FSM	ENSG00000171311.13	ENST00000476234.5	739	4	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_3	76.4736701239206	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTGGATCACAAAGTCAGG	-97434944	True	NA	NA	False	NA	NA	NA	97446006	97440763	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_97441260_97443236_97443312_97445731_97445848_97445954
transcript_26021.known	chr10	-	2113	2	FSM	ENSG00000171311.13	ENST00000489158.1	2113	2	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTCAATGATTATAGGCAA	-97434944	True	NA	NA	False	AGTAAA	-2	NA	97446006	97443786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_97445848_97445954
transcript_26026.known	chr10	+	1977	12	FSM	ENSG00000171307.19	ENST00000393760.6	1977	12	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	197.708609359522	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGCTTCTCACTCTCTGC	97441107	True	NA	9	True	AATAAA	-22	NA	97446174	97457370	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_97446354_97450356_97450537_97451670_97451919_97452089_97452285_97452414_97452504_97452894_97452924_97453529_97453664_97453798_97453847_97454713_97454800_97455659_97455784_97455973_97456045_97456776
transcript_26029.known	chr10	+	1798	11	FSM	ENSG00000171307.19	ENST00000370854.7	1798	11	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_6	135.091265446734	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTAGCTTCTCACTCT	97441102	True	NA	5	True	AATAAA	-18	NA	97446169	97457366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_97446354_97451670_97451919_97452089_97452285_97452414_97452504_97452894_97452924_97453529_97453664_97453798_97453847_97454713_97454800_97455659_97455784_97455973_97456045_97456776
transcript_26030.nic	chr10	+	1739	11	NIC	ENSG00000171307.19	novel	1798	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_8	173.494207396097	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTAGCTTCTCACTCT	97441107	True	NA	5	True	AATAAA	-18	NA	97446174	97457366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_97446354_97451670_97451919_97452089_97452285_97452414_97452504_97452894_97452924_97453529_97453664_97453798_97453847_97454713_97454800_97455713_97455784_97455973_97456045_97456776
transcript_26032.nic	chr10	+	1939	11	NIC	ENSG00000171307.19	novel	1977	12	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_2	196.620980569216	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTAGCTTCTCACTCT	97441093	True	NA	5	True	AATAAA	-18	NA	97446160	97457366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_97446354_97450356_97450537_97451670_97451919_97452089_97452285_97452414_97452504_97452894_97452924_97453529_97453664_97454713_97454800_97455659_97455784_97455973_97456045_97456776
transcript_26040.known	chr10	+	1718	10	FSM	ENSG00000171307.19	ENST00000352634.8	1718	10	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_6	106.321315935339	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTAGCTTCTCACTCT	97441134	True	NA	5	True	AATAAA	-18	NA	97446201	97457366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_97446354_97451670_97451919_97452089_97452285_97452414_97452504_97452894_97452924_97453529_97453664_97454713_97454800_97455659_97455784_97455973_97456045_97456776
transcript_26041.nic	chr10	+	1714	10	NIC	ENSG00000171307.19	novel	1718	10	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_7	163.459663918641	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTAGCTTCTCACTCT	97441084	True	NA	5	True	AATAAA	-18	NA	97446151	97457366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_97446354_97451670_97451919_97452089_97452285_97452414_97452504_97452894_97452924_97453529_97453664_97454713_97454800_97455713_97455784_97455973_97456045_97456776
transcript_26044.known	chr10	+	1647	10	FSM	ENSG00000171307.19	ENST00000353979.7	1647	10	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	189.873317091185	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTAGCTTCTCACTCT	97441136	True	NA	5	True	AATAAA	-18	NA	97446203	97457366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_97446354_97451670_97451919_97452089_97452285_97452414_97452504_97453617_97453664_97453798_97453847_97454713_97454800_97455659_97455784_97455973_97456045_97456776
transcript_26052.known	chr10	+	1519	9	FSM	ENSG00000171307.19	ENST00000345745.9	1519	9	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	170.066852663886	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGCTTCTCACTCTCTGC	97441142	True	NA	9	True	AATAAA	-22	NA	97446209	97457370	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_97446354_97451670_97451919_97452414_97452504_97452894_97452924_97453529_97453664_97454713_97454800_97455659_97455784_97455973_97456045_97456776
transcript_26055.known	chr10	+	1280	8	FSM	ENSG00000171307.19	ENST00000370846.8	1280	8	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_5	161.450314591309	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGACATCCCTTTACTCA	97441129	True	NA	NA	False	AAGAAA	-24	NA	97446196	97457085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_97446354_97451670_97451919_97452089_97452285_97452414_97452504_97452894_97452924_97455601_97455784_97455973_97456045_97456776
transcript_26065.nic	chr10	-	3840	32	NIC	ENSG00000155229.21	novel	3532	32	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_29	98.1942584010615	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGCTGTCAGATATTTCC	-97498622	False	NA	-4	True	AATAAA	-16	NA	97498646	97458323	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_97458720_97458799_97458901_97459222_97459283_97459361_97459527_97459658_97459742_97460045_97460233_97460694_97460752_97460906_97461008_97461495_97461623_97461827_97461897_97462016_97462120_97462582_97462683_97463857_97464014_97465804_97465955_97466058_97466160_97466503_97466586_97466775_97466902_97467504_97467584_97468251_97468407_97468965_97469105_97469645_97469724_97470128_97470204_97470774_97470862_97476682_97476745_97476834_97476964_97477346_97477417_97477854_97477930_97478303_97478390_97480240_97480358_97480941_97481043_97484102_97484152_97498272
transcript_26072.known	chr10	-	3499	31	FSM	ENSG00000155229.21	ENST00000438925.7	3499	31	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_24	50.5380934433511	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGCTGTCAGATATTTCC	-97489772	True	NA	-4	True	AATAAA	-16	NA	97498422	97458323	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_97458720_97458799_97458901_97459222_97459283_97459361_97459527_97459658_97459742_97460045_97460233_97460694_97460752_97460906_97461008_97461495_97461623_97461827_97461897_97462016_97462120_97462582_97462683_97463857_97464014_97465804_97465955_97466058_97466160_97466503_97466586_97466775_97466902_97467504_97467584_97468251_97468407_97468965_97469105_97469645_97469724_97470128_97470204_97470774_97470862_97476682_97476745_97476834_97476964_97477346_97477417_97477854_97477930_97478303_97478390_97480941_97481043_97484102_97484152_97498272
transcript_26084.known	chr10	-	3401	30	FSM	ENSG00000155229.21	ENST00000415383.5	3401	30	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_26	121.153394774552	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGCTGTCAGATATTTCC	-97489738	True	NA	-4	True	AATAAA	-16	NA	97498388	97458323	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_97458720_97458799_97458901_97459222_97459283_97459361_97459527_97459658_97459742_97460045_97460233_97460694_97460752_97460906_97461008_97461495_97461623_97461827_97461897_97462016_97462120_97462582_97462683_97463857_97464014_97465804_97465955_97466058_97466157_97466503_97466586_97466775_97466902_97467504_97467584_97468251_97468407_97468965_97469105_97469645_97469724_97470128_97470204_97470774_97470862_97476682_97476745_97476834_97476964_97477346_97477405_97477854_97477930_97478303_97478390_97480941_97481043_97498272
transcript_26088.known	chr10	-	3555	30	FSM	ENSG00000155229.21	ENST00000355839.10	3555	30	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_24	85.4139531968486	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGGCTGTCAGATATTT	-97498585	False	NA	-6	True	AATAAA	-14	NA	97498609	97458325	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_97458720_97458799_97458901_97459222_97459283_97459361_97459527_97459658_97459742_97460045_97460233_97460694_97460752_97460906_97461008_97461495_97461623_97461827_97461897_97462016_97462120_97462582_97462683_97463857_97464014_97465804_97465955_97466058_97466160_97466503_97466586_97466775_97466902_97467504_97467584_97468251_97468407_97468965_97469105_97469645_97469724_97470128_97470204_97470774_97470862_97476682_97476745_97477346_97477417_97477854_97477930_97478303_97478390_97480941_97481043_97484102_97484152_97498272
transcript_26115.known	chr10	-	3165	29	FSM	ENSG00000155229.21	ENST00000327238.14	3165	29	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_18	91.5575262457702	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGGCTGTCAGATATTT	-97489734	True	NA	-6	True	AATAAA	-14	NA	97498384	97458325	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_97458720_97458799_97458901_97459222_97459283_97459361_97459527_97459658_97459742_97460045_97460233_97460694_97460752_97460906_97461008_97461495_97461623_97461827_97461897_97462016_97462120_97462582_97462683_97463857_97464014_97465804_97465955_97466058_97466160_97466503_97466586_97466775_97466902_97467504_97467584_97469645_97469724_97470128_97470204_97470774_97470862_97476682_97476745_97476834_97476964_97477346_97477417_97477854_97477930_97478303_97478390_97480941_97481043_97484102_97484152_97498272
transcript_26149.known	chr10	+	1647	3	FSM	ENSG00000165886.5	ENST00000370664.4	1647	3	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_2	12.5	330	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGCCTGGCATTTGACTG	97496205	True	NA	13	True	AATAAA	-18	NA	97498923	97571206	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_97499274_97567913_97568142_97570137
transcript_26153.known	chr10	+	4189	9	FSM	ENSG00000155252.13	ENST00000370631.3	4189	9	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_6	21.1999410376539	219	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTAGTGCCAAGGGCTT	97638181	True	NA	NA	False	AATAAA	-18	NA	97640685	97676434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_97641178_97650940_97651142_97656284_97656417_97656820_97656975_97662906_97662969_97664884_97664985_97666437_97666572_97667060_97667121_97673580
transcript_26157.known	chr10	+	2442	7	FSM	ENSG00000241935.9	ENST00000370646.9	2442	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.577350269189626	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGTGTGGCTATATAAAGA	97584357	False	NA	NA	False	AATAAA	-16	NA	97584388	97612802	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_97584915_97598774_97598904_97599088_97599217_97599679_97599815_97600066_97600164_97601856_97601991_97611509
transcript_26165.known	chr10	-	2333	5	FSM	ENSG00000171160.18	ENST00000307450.11	2333	5	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	142.594486218788	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACCTAGTTTTCCTGACT	-97631117	True	NA	-7	True	AATAAA	-19	NA	97633500	97614554	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_97616412_97616677_97616788_97617207_97617323_97619586_97619684_97633346
transcript_26167.known	chr10	-	2225	4	FSM	ENSG00000171160.18	ENST00000478953.1	2225	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	185.710048791718	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTAGTTTTCCTGACTTT	-97631117	True	NA	-5	True	AATAAA	-21	NA	97633500	97614552	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_97616412_97617207_97617323_97619586_97619684_97633346
transcript_26168.nnic	chr10	-	2240	4	NIC	ENSG00000171160.18	novel	2333	5	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_3	43.0297055016131	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACCTAGTTTTCCTGACT	-97631121	True	NA	-7	True	AATAAA	-19	NA	97633504	97614554	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_97616412_97616677_97616788_97617207_97617323_97633346
transcript_26169.known	chr10	+	1999	3	FSM	ENSG00000241935.9	ENST00000370647.8	1999	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGTGTGGCTATATAAAGA	97584311	True	NA	NA	False	AATAAA	-16	NA	97584342	97612802	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_97584915_97601856_97601991_97611509
transcript_26171.known	chr10	-	419	2	FSM	ENSG00000171160.18	ENST00000370635.3	419	2	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTTAATTCAACCTCCA	-97631108	True	NA	-22	True	AATAAA	-16	NA	97633491	97619409	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_97619684_97633346
transcript_26172.known	chr10	-	1375	3	FSM	ENSG00000119986.7	ENST00000370626.4	1375	3	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	4.5	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGTGTGAGTCTGTCAC	-97686167	True	NA	-1	True	AATAAA	-15	NA	97687241	97677423	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_97678026_97679618_97679916_97686765
transcript_26176.nnic	chr10	+	2547	3	NNC	ENSG00000155254.13	novel	3213	2	NA	NA	-33	0	intron_retention	FALSE	non_canonical	0	0	junction_1	222.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTCTTCTGTCCTG	97710005	True	NA	26	True	GATAAA	-21	NA	97713696	97718150	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_97713882_97714580_97715986_97717193
transcript_26182.nnic	chr10	+	2650	3	NNC	ENSG00000155254.13	novel	3213	2	NA	NA	35	0	intron_retention	FALSE	non_canonical	0	0	junction_1	222.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTCTTCTGTCCTG	97710073	True	NA	26	True	GATAAA	-21	NA	97713764	97718150	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_97713882_97714409_97715986_97717193
transcript_26184.known	chr10	+	3213	2	FSM	ENSG00000155254.13	ENST00000285605.8	3213	2	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTCTTCTGTCCTG	97710038	True	NA	26	True	GATAAA	-21	NA	97713729	97718150	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_97715986_97717193
transcript_26190.known	chr10	+	3026	13	FSM	ENSG00000155256.18	ENST00000684270.1	3026	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	39.2558382069895	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTTGTCATGTCTTTG	97734204	True	NA	14	True	AATAAA	-16	NA	97737127	97760895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_97737322_97738476_97738675_97743093_97743165_97744728_97744916_97748268_97748365_97749473_97749587_97750330_97750471_97751390_97751463_97752856_97752878_97753037_97753183_97757264_97757312_97757641_97757724_97759235
transcript_26193.nnic	chr10	+	3017	12	NIC	ENSG00000155256.18	novel	3026	13	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	31.8869386975942	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTTGTCATGTCTTTG	97734167	True	NA	14	True	AATAAA	-16	NA	97737090	97760895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_97737322_97738476_97738650_97743093_97743165_97744728_97744916_97748268_97748365_97749473_97749587_97750330_97750471_97751390_97751463_97753037_97753183_97757264_97757312_97757641_97757724_97759235
transcript_26194.known	chr10	+	2997	12	FSM	ENSG00000155256.18	ENST00000359980.5	2997	12	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	24.1370056411791	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTTGTCATGTCTTTG	97734216	True	NA	14	True	AATAAA	-16	NA	97737139	97760895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_97737326_97738476_97738675_97743093_97743165_97744728_97744916_97748268_97748365_97749473_97749587_97750330_97750471_97751390_97751463_97753037_97753183_97757264_97757312_97757641_97757724_97759235
transcript_26200.known	chr10	+	2927	11	FSM	ENSG00000155256.18	ENST00000337540.11	2927	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	32.5159960634762	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTTTGTGTTGGCATTT	97734197	True	NA	25	True	AATAAA	-27	NA	97737120	97760906	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_97737322_97738476_97738650_97744728_97744916_97748268_97748365_97749473_97749587_97750330_97750471_97751390_97751463_97753037_97753183_97757264_97757312_97757641_97757724_97759235
transcript_26204.nnic	chr10	+	2929	11	NIC	ENSG00000155256.18	novel	3026	13	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_5	32.0312347560939	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTTGTCATGTCTTTG	97734167	True	NA	14	True	AATAAA	-16	NA	97737090	97760895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_97737322_97738476_97738675_97743093_97743165_97744728_97744916_97748268_97748365_97750330_97750471_97751390_97751463_97753037_97753183_97757264_97757312_97757641_97757724_97759235
transcript_26205.nnic	chr10	+	2946	11	NIC	ENSG00000155256.18	novel	3026	13	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_4	33.3300165016461	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTTGTCATGTCTTTG	97734167	True	NA	14	True	AATAAA	-16	NA	97737090	97760895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_97737322_97738476_97738675_97743093_97743165_97744728_97744916_97749473_97749587_97750330_97750471_97751390_97751463_97753037_97753183_97757264_97757312_97757641_97757724_97759235
transcript_26206.nnic	chr10	+	2971	11	NIC	ENSG00000155256.18	novel	3026	13	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_2	29.2316609175736	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTTGTCATGTCTTTG	97734167	True	NA	14	True	AATAAA	-16	NA	97737090	97760895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_97737322_97738476_97738675_97744728_97744916_97748268_97748365_97749473_97749587_97750330_97750471_97751390_97751463_97753037_97753183_97757264_97757312_97757641_97757724_97759235
transcript_26213.nnic	chr10	+	2833	10	NIC	ENSG00000155256.18	novel	3026	13	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_4	32.2145584755988	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTTGTCATGTCTTTG	97734167	True	NA	14	True	AATAAA	-16	NA	97737090	97760895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_97737322_97738476_97738675_97743093_97743165_97744728_97744916_97750330_97750471_97751390_97751463_97753037_97753183_97757264_97757312_97757641_97757724_97759235
transcript_26218.known	chr10	+	2765	10	FSM	ENSG00000155256.18	ENST00000357540.8	2765	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	34.4462365125211	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTTTGTGTTGGCATTT	97734197	True	NA	25	True	AATAAA	-27	NA	97737120	97760906	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_97737322_97738476_97738675_97748268_97748365_97749473_97749587_97750330_97750471_97751390_97751463_97753037_97753183_97757264_97757312_97757641_97757724_97759235
transcript_26219.known	chr10	+	2769	10	FSM	ENSG00000155256.18	ENST00000370610.7	2769	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	38.7234576560449	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTTTGTGTTGGCATTT	97734197	True	NA	25	True	AATAAA	-27	NA	97737120	97760906	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_97737322_97744728_97744916_97748268_97748365_97749473_97749587_97750330_97750471_97751375_97751463_97753037_97753183_97757264_97757312_97757641_97757724_97759235
transcript_26224.known	chr10	+	2669	9	FSM	ENSG00000155256.18	ENST00000370613.7	2669	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	38.655530005421	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTTTGTGTTGGCATTT	97734197	True	NA	25	True	AATAAA	-27	NA	97737120	97760906	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_97737322_97738476_97738675_97749473_97749587_97750330_97750471_97751390_97751463_97753037_97753183_97757264_97757312_97757641_97757724_97759235
transcript_26230.known	chr10	+	512	2	FSM	ENSG00000155256.18	ENST00000462887.1	512	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCCAGCCCAGGAGAGGC	97734259	True	NA	NA	False	NA	NA	NA	97737182	97738845	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_97737326_97738476
transcript_26232.known	chr10	-	1883	3	FSM	ENSG00000120057.5	ENST00000266066.4	1883	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTTGGACCAGGTGGTT	-97771890	True	NA	-9	True	ATTAAA	-17	NA	97771999	97766750	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_97767861_97769667_97769746_97771304
transcript_26233.known	chr10	-	2683	15	FSM	ENSG00000095713.14	ENST00000370597.8	2683	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	6.61977556805581	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGTGTTTGTGGTTTT	-98030325	True	NA	NA	False	AATAAA	-37	NA	98030621	97864999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_97865715_97880248_97880393_97882785_97882829_97884205_97884352_97895244_97895414_97895884_97895986_97896908_97896992_97901502_97901640_97904668_97904815_97908012_97908148_97917499_97917657_97923263_97923401_97936169_97936367_98011137_98011338_98030448
transcript_26234.nic	chr10	-	1413	7	ISM	ENSG00000095713.14	ENST00000370591.6	2348	15	207	24772	0	-24055	5prime_fragment	FALSE	canonical	2	9	junction_1	5.03322295684717	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCTCTCCCTCACTCCTC	-98030325	True	NA	NA	False	AATAAA	-33	NA	98030621	97904400	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_97904815_97908012_97908148_97917499_97917657_97923263_97923401_97936169_97936367_98011137_98011338_98030448
transcript_26238.known	chr10	+	3393	10	FSM	ENSG00000166024.14	ENST00000298999.8	3393	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	41.2268640692893	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGTGGTGTTTGTTGGT	98133082	True	NA	15	True	ATTAAA	-20	NA	98134656	98244897	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_98134707_98156092_98156148_98162882_98162976_98163292_98163398_98208100_98209900_98231511_98231688_98234445_98234517_98235424_98235521_98236023_98236165_98244090
transcript_2624.known	chr1	+	440	2	FSM	ENSG00000230337.2	ENST00000435388.2	685	2	245	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAATACTTGCTTTTCACT	11099516	False	NA	NA	False	AATAAA	-21	NA	11099674	11102100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11099815_11101800
transcript_26240.nnic	chr10	+	3358	9	NIC	ENSG00000166024.14	novel	3393	10	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	3	46	junction_1	28.0710593850677	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCACTGTGGTGTTTGTT	98133059	True	NA	12	True	ATTAAA	-17	NA	98134633	98244894	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_98134707_98162882_98162976_98163292_98163398_98208100_98209900_98231511_98231688_98234445_98234517_98235424_98235521_98236023_98236165_98244090
transcript_26241.known	chr10	+	3372	9	FSM	ENSG00000166024.14	ENST00000370584.7	3372	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	54.3317356615818	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCACTGTGGTGTTTGTT	98133049	True	NA	12	True	ATTAAA	-17	NA	98134623	98244894	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_98134707_98163292_98163398_98186466_98186564_98208100_98209900_98231511_98231688_98234445_98234517_98235424_98235521_98236023_98236165_98244090
transcript_2626.known	chr1	-	8721	58	FSM	ENSG00000198793.13	ENST00000361445.9	8721	58	0	0	0	0	multi-exon	TRUE	canonical	3	151	junction_39	46.0034925808888	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATATGAGTGGCGTTTTA	-11254221	True	NA	-8	True	AATAAA	-23	NA	11262551	11106534	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_11107501_11108180_11108287_11109289_11109371_11109648_11109730_11112851_11112918_11114317_11114454_11114812_11114888_11115395_11115469_11117003_11117087_11121245_11121369_11121978_11122127_11124497_11124634_11126621_11126797_11127009_11127145_11127623_11127807_11128003_11128127_11128453_11128553_11128854_11128952_11129737_11129839_11130528_11130778_11133079_11133198_11134350_11134467_11139303_11139436_11139532_11139659_11144647_11144756_11144967_11145046_11146675_11146792_11150125_11150227_11157151_11157292_11167441_11167518_11199257_11199404_11199540_11199704_11204560_11204704_11209311_11209459_11210813_11210907_11212311_11212475_11212795_11212909_11213398_11213567_11216147_11216235_11228667_11228919_11230924_11231055_11231299_11231435_11232435_11232529_11233397_11233488_11234142_11234266_11237842_11238049_11238401_11238618_11240302_11240548_11241552_11241682_11243113_11243301_11247624_11247734_11247818_11248095_11253838_11253974_11255991_11256193_11256932_11257166_11258484_11258594_11259247_11259424_11262444
transcript_26261.known	chr10	-	2023	16	FSM	ENSG00000119943.13	ENST00000370575.5	2023	16	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_3	4.59661711358352	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTGCTTGTATTTTTT	-98414678	True	NA	-3	True	ATTAAA	-19	NA	98415182	98383567	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_98383869_98384946_98385068_98387200_98387308_98388353_98388509_98390597_98390755_98391009_98391083_98392431_98392567_98392941_98393084_98395195_98395294_98395390_98395453_98397344_98397499_98400101_98400258_98407581_98407656_98407903_98407998_98410938_98410959_98415008
transcript_26275.known	chr10	-	3703	20	FSM	ENSG00000107521.20	ENST00000361490.9	3703	20	0	0	0	0	multi-exon	FALSE	canonical	2	27	junction_19	73.8207757017478	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAGCAGAGATGCTCACA	-98443024	True	NA	1	True	AATAAA	-30	NA	98446935	98416197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_98417727_98418174_98418258_98420044_98420159_98422368_98422514_98423602_98423669_98423752_98423888_98424312_98424375_98425540_98425721_98425817_98425986_98427214_98427265_98429572_98429643_98429790_98429890_98430570_98430671_98431130_98431292_98433982_98434092_98435271_98435415_98435634_98435773_98443123_98443241_98445299_98445405_98446806
transcript_26276.nnic	chr10	-	2843	20	NNC	ENSG00000107521.20	novel	3703	20	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	2	39	junction_19	73.014399217379	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTAGTGCTTCTAGACC	NA	False	NA	-1	True	AATAAA	-30	NA	98446963	98417014	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_98417727_98418174_98418258_98420044_98420159_98422368_98422514_98423602_98423669_98423752_98423888_98424312_98424375_98425540_98425721_98425817_98425986_98427214_98427265_98429572_98429643_98429790_98429890_98430570_98430671_98431130_98431292_98433982_98434092_98435271_98435415_98435634_98435773_98443123_98443241_98445299_98445414_98446886
transcript_26283.known	chr10	-	2791	19	FSM	ENSG00000107521.20	ENST00000467246.5	2791	19	0	0	0	0	multi-exon	FALSE	canonical	2	29	junction_13	84.5201415106935	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTAGTGCTTCTAGACC	-98442976	True	NA	-1	True	AATAAA	-30	NA	98446887	98417014	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_98417727_98418174_98418258_98420044_98420159_98422368_98422514_98423602_98423669_98423752_98423888_98424312_98424375_98425540_98425721_98425817_98425986_98427214_98427265_98429572_98429643_98430570_98430671_98431130_98431292_98433939_98434092_98435271_98435415_98435634_98435773_98443123_98443241_98445299_98445414_98446806
transcript_26286.nic	chr10	-	2828	19	NIC	ENSG00000107521.20	novel	2791	19	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	2	65	junction_4	80.4981404585469	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTAGTGCTTCTAGACC	NA	False	NA	-1	True	AATAAA	-30	NA	98446967	98417014	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_98417727_98418174_98418258_98420044_98420159_98422368_98422514_98423602_98423669_98423752_98423888_98424312_98424375_98425540_98425721_98425817_98425986_98427214_98427265_98429572_98429643_98430570_98430671_98431130_98431292_98433982_98434092_98435271_98435415_98435634_98435773_98443123_98443241_98445299_98445414_98446806
transcript_26319.known	chr10	-	1580	10	FSM	ENSG00000107521.20	ENST00000338546.9	1580	10	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	90.5989670995546	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAAATGGTTGAGGTGTG	-98443002	True	NA	97	True	AATAAA	-16	NA	98446913	98429150	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_98429643_98429790_98429890_98430570_98430671_98431130_98431292_98433982_98434092_98435271_98435415_98435634_98435773_98443123_98443241_98445299_98445414_98446806
transcript_2638.known	chr1	+	3654	2	FSM	ENSG00000120942.14	ENST00000376810.6	3654	2	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	0	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAATGGTCTGGCTTCTGGT	11271610	True	NA	14	True	ATTAAA	-23	NA	11273197	11288434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11274061_11285643
transcript_26393.known	chr10	-	922	4	FSM	ENSG00000107521.20	ENST00000465957.1	922	4	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	96.8067949864861	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCAATAAAAGGAATATATC	-98443016	True	NA	-29	True	NA	NA	NA	98446927	98442387	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_98442958_98443123_98443241_98445299_98445414_98446806
transcript_26413.known	chr10	+	5702	11	FSM	ENSG00000119946.11	ENST00000356713.5	5702	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	2.28254244210267	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGCTGTTTTCCTTGCCC	99329281	True	NA	NA	False	AATAAA	-44	NA	99329355	99394330	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_99330961_99357511_99357656_99360834_99360976_99362226_99362397_99364416_99364517_99364954_99365003_99377054_99377219_99387819_99388004_99388151_99388302_99390305_99390408_99391436
transcript_26418.known	chr10	-	1978	9	FSM	ENSG00000120053.12	ENST00000370508.7	1978	9	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_4	39.5719281814773	390	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGAGTTGATTTTATGAC	-99424683	True	NA	-10	True	AATAAA	-20	NA	99430624	99396869	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_99397687_99402579_99402723_99403468_99403635_99403723_99403875_99405755_99405861_99406136_99406250_99406725_99406850_99420623_99420806_99430447
transcript_26429.known	chr10	+	3490	2	FSM	ENSG00000224934.6	ENST00000647895.1	3490	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTATTTCTAATCACTAT	99430404	True	NA	-8	True	AATAAA	-1	NA	99430918	99438098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_99433941_99437630
transcript_2643.known	chr1	+	5265	21	FSM	ENSG00000204624.8	ENST00000294484.7	5265	21	0	0	0	0	multi-exon	TRUE	canonical	2	14	junction_18	3.73195659138742	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGCTGCTGTTAATACGA	11478228	True	NA	4	True	ATTAAA	-17	NA	11479154	11537551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11479373_11500989_11502089_11502677_11502898_11514389_11514527_11515368_11515504_11516000_11516162_11517462_11517603_11519354_11519504_11519718_11519881_11520686_11520849_11523941_11524056_11525175_11525313_11526650_11526836_11529555_11529687_11529786_11529960_11530906_11531034_11531564_11531711_11534380_11534541_11535010_11535125_11535477_11535645_11536323
transcript_26430.known	chr10	-	1526	4	FSM	ENSG00000155287.11	ENST00000370495.6	1526	4	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	13.7194104181711	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTCATTGGGTTTGTCT	-99619982	True	NA	-23	True	AATAAA	-17	NA	99620439	99610521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_99611367_99612542_99612600_99613695_99613925_99620044
transcript_26432.known	chr10	+	8548	13	FSM	ENSG00000198018.7	ENST00000370489.5	8548	13	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	9.98436277385793	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACTCATGAGTTGCTACT	99658361	True	NA	21	True	AATAAA	-33	NA	99659508	99711241	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_99659589_99659861_99659965_99661445_99661629_99679260_99679467_99679724_99679876_99685791_99685896_99688693_99688751_99691384_99691519_99695955_99696123_99698533_99698859_99700972_99701059_99702511_99702674_99704451
transcript_26440.known	chr10	+	1332	9	FSM	ENSG00000119929.13	ENST00000370476.10	1332	9	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_6	39.4746754261514	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATAGTCTCTTATTCTTGC	99727690	True	NA	NA	False	AATAAA	-17	NA	99732233	99756134	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_99732410_99736245_99736318_99739709_99739770_99743152_99743363_99744036_99744073_99747256_99747391_99750368_99750397_99754528_99754635_99755624
transcript_26442.nnic	chr10	+	1291	9	NNC	ENSG00000119929.13	novel	1332	9	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	99.3513336598961	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATAGTCTCTTATTCTTGC	99727678	True	NA	NA	False	AATAAA	-17	NA	99732221	99756134	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_99732357_99736245_99736318_99739709_99739770_99743152_99743363_99744036_99744073_99747256_99747391_99750368_99750397_99754528_99754635_99755624
transcript_26444.known	chr10	-	2788	9	FSM	ENSG00000014919.13	ENST00000370483.9	2788	9	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	68.1431168570972	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCAGTATTTCCTTATAG	-99729142	True	NA	0	True	AATAAA	-20	NA	99732100	99711843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_99713480_99716347_99716462_99718345_99718501_99720986_99721069_99723955_99724124_99726967_99727155_99727440_99727564_99729552_99729735_99731959
transcript_26447.known	chr10	-	5030	9	FSM	ENSG00000014919.13	ENST00000016171.6	5030	9	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_2	22.1697992773954	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTCAACCTAGAATTTTT	-99729169	True	NA	NA	False	ATTAAA	-18	NA	99732127	99710867	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_99714719_99716347_99716462_99718345_99718501_99720986_99721069_99723955_99724124_99726967_99727155_99727440_99727564_99729552_99729735_99731959
transcript_26482.known	chr10	-	6428	17	FSM	ENSG00000107554.17	ENST00000324109.9	6428	17	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_16	41.2696449433479	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGATGTTTTCTTGATTT	-100009464	True	NA	-5	True	AATAAA	-16	NA	100009947	99875576	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_99877337_99879810_99880362_99884010_99884210_99885686_99885867_99886299_99886633_99888824_99888954_99894945_99895051_99896266_99896398_99898085_99898286_99898742_99898761_99899918_99900067_99907994_99908095_99908952_99909147_99955213_99957206_99969114_99969238_99971979_99972135_100009837
transcript_26491.known	chr10	-	4178	14	FSM	ENSG00000107554.17	ENST00000543621.6	4178	14	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_7	19.0942849035079	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGATGTTTTCTTGATTT	NA	False	NA	-5	True	AATAAA	-16	NA	99914082	99875576	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_99877337_99879810_99880362_99884010_99884210_99885686_99885867_99886299_99886633_99888824_99888954_99894945_99895051_99896266_99896398_99898085_99898286_99898742_99898761_99899918_99900067_99907994_99908095_99908952_99909147_99913952
transcript_26492.known	chr10	-	5437	14	FSM	ENSG00000107554.17	ENST00000636706.1	5437	14	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_13	30.8629342425371	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGATGTTTTCTTGATTT	-99930882	False	NA	-5	True	AATAAA	-16	NA	99930996	99875576	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_99877337_99879810_99880362_99884010_99884210_99885686_99885867_99886299_99886633_99888824_99888954_99894945_99895051_99896266_99896398_99898085_99898286_99898742_99898761_99899918_99900067_99907994_99908095_99908952_99909147_99929607
transcript_26500.known	chr10	-	1855	9	FSM	ENSG00000120054.12	ENST00000370418.8	1855	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1.98431348329844	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCACTTTGGGAGGCCGAG	NA	False	NA	NA	False	NA	NA	NA	100081869	100042192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_100042574_100048757_100048877_100054346_100054447_100057012_100057153_100063613_100063726_100065187_100065371_100069713_100069870_100075910_100076108_100081402
transcript_26504.nic	chr10	-	3249	12	NIC	ENSG00000107566.14	novel	1453	12	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_11	86.1240696431655	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATTTGTGTTTTTTTTTC	-100181375	True	NA	-3	True	AATAAA	-16	NA	100186057	100150093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_100152353_100154859_100154940_100156144_100156235_100164003_100164096_100167347_100167407_100174207_100174282_100175944_100176071_100178132_100178195_100179200_100179248_100183755_100183838_100185513_100185638_100185903
transcript_26505.known	chr10	-	1453	12	FSM	ENSG00000107566.14	ENST00000407654.7	1453	12	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_11	61.9330483614269	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAGATCTGTTGAATAAT	-100181351	True	NA	-5	True	AATATA	-22	NA	100186033	100151807	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_100152353_100154859_100154940_100156144_100156235_100164003_100164096_100167347_100167407_100174207_100174282_100175944_100176071_100178132_100178195_100179200_100179248_100183755_100183838_100185513_100185638_100185961
transcript_26508.nic	chr10	-	2902	12	NIC	ENSG00000107566.14	novel	1453	12	NA	NA	-24	-347	combination_of_known_junctions	FALSE	canonical	3	86	junction_11	86.1240696431655	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGTTGCTGCAGATGAT	-100181375	True	NA	NA	False	AATAAA	-14	NA	100186057	100150440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_100152353_100154859_100154940_100156144_100156235_100164003_100164096_100167347_100167407_100174207_100174282_100175944_100176071_100178132_100178195_100179200_100179248_100183755_100183838_100185513_100185638_100185903
transcript_26523.known	chr10	-	3600	21	FSM	ENSG00000213341.11	ENST00000370397.8	3600	21	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	23.6271030809958	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAAGGTTCCATGAAGTG	-100226894	True	NA	66	True	AATAAA	-25	NA	100229596	100188299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_100189628_100190868_100190969_100193297_100193432_100193983_100194132_100194424_100194522_100199970_100200021_100200670_100200781_100202087_100202150_100204505_100204658_100205075_100205200_100207229_100207333_100209594_100209790_100217994_100218131_100218717_100218826_100219007_100219133_100219269_100219360_100220587_100220677_100222111_100222182_100222865_100222981_100225922_100226018_100229427
transcript_26531.nic	chr10	-	2028	15	NIC	ENSG00000095485.18	novel	2591	14	NA	NA	-18	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_1	41.3639890706486	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAAGTGTCTTGTGTTCA	-100265526	True	NA	-4	True	AATGAA	-22	NA	100267698	100232298	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_100232488_100233109_100233372_100235666_100235765_100236849_100236970_100238021_100238232_100243697_100243778_100245798_100245914_100246794_100246936_100250247_100250333_100253420_100253540_100256261_100256477_100260217_100260320_100260965_100261045_100261978_100262064_100267570
transcript_26533.nnic	chr10	-	2143	15	NNC	ENSG00000095485.18	novel	2591	14	NA	NA	-18	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	41.3639890706486	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGAGAAGTGTCTTGTG	-100265526	True	NA	-8	True	AATGAA	-18	NA	100267698	100232302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_100232544_100233046_100233372_100235666_100235765_100236849_100236970_100238021_100238232_100243697_100243778_100245798_100245914_100246794_100246936_100250247_100250333_100253420_100253540_100256261_100256477_100260217_100260320_100260965_100261045_100261978_100262064_100267570
transcript_26539.nic	chr10	-	1913	15	NIC	ENSG00000095485.18	novel	2591	14	NA	NA	-18	-109	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	41.3639890706486	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTGTCATCCAGCTCC	-100265526	True	NA	-21	True	AATAAA	-11	NA	100267698	100232413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_100232488_100233109_100233372_100235666_100235765_100236849_100236970_100238021_100238232_100243697_100243778_100245798_100245914_100246794_100246936_100250247_100250333_100253420_100253540_100256261_100256477_100260217_100260320_100260965_100261045_100261978_100262064_100267570
transcript_26544.nnic	chr10	-	2678	14	NNC	ENSG00000095485.18	novel	2591	14	NA	NA	4	0	intron_retention	FALSE	canonical	2	4	junction_13	41.6793905621608	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGTGTCTTGTGTTCAT	-100265504	True	NA	-3	True	AATGAA	-23	NA	100267676	100232297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_100233372_100235666_100235765_100236849_100236970_100238021_100238232_100243697_100243778_100245798_100245914_100246794_100246936_100250247_100250333_100253420_100253540_100256261_100256477_100260217_100260320_100260965_100261045_100261978_100262064_100267521
transcript_26545.known	chr10	-	2591	14	FSM	ENSG00000095485.18	ENST00000354105.10	2591	14	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_8	21.6125100743985	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGTGTCTTGTGTTCAT	-100265466	True	NA	-3	True	AATGAA	-23	NA	100267638	100232297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_100233372_100235666_100235765_100236849_100236970_100238021_100238232_100243697_100243778_100245798_100245914_100246794_100246936_100250247_100250333_100253420_100253540_100256261_100256477_100260217_100260320_100260965_100261045_100261978_100262064_100267570
transcript_26559.known	chr10	-	2402	13	FSM	ENSG00000095485.18	ENST00000468709.5	2402	13	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_9	51.7807208867891	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGTGTCTTGTGTTCAT	-100265508	True	NA	-3	True	AATGAA	-23	NA	100267680	100232297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_100233372_100235666_100235765_100236849_100236970_100238021_100238232_100243697_100243778_100245798_100245914_100246794_100246936_100250247_100250333_100253420_100253540_100260217_100260320_100260965_100261029_100261978_100262064_100267570
transcript_26562.nnic	chr10	-	2531	13	NIC	ENSG00000095485.18	novel	2591	14	NA	NA	-18	0	intron_retention	FALSE	canonical	3	21	junction_2	36.7970220715391	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGTGTCTTGTGTTCAT	-100265526	True	NA	-3	True	AATGAA	-23	NA	100267698	100232297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_100233372_100235666_100235765_100238021_100238232_100243697_100243778_100245798_100245914_100246794_100246936_100250247_100250333_100253420_100253540_100256261_100256477_100260217_100260320_100260965_100261045_100261978_100262064_100267570
transcript_26576.nic	chr10	-	2143	10	NIC	ENSG00000095485.18	novel	2402	13	NA	NA	-4	0	intron_retention	FALSE	canonical	3	15	junction_9	46.3920491272182	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGTGTCTTGTGTTCAT	-100265499	True	NA	-3	True	AATGAA	-23	NA	100267671	100232297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_100233372_100235666_100235765_100236849_100236970_100238021_100238232_100243697_100243778_100245798_100245914_100246794_100246936_100250247_100250333_100253420_100253540_100267570
transcript_26592.known	chr10	-	2619	5	FSM	ENSG00000196072.12	ENST00000370372.7	2619	5	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_4	36.6264931436249	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTTCACCTTAATATTT	-100277581	True	NA	NA	False	ATTAAA	-17	NA	100286680	100273292	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_100275494_100280123_100280229_100280933_100281054_100286096_100286214_100286604
transcript_266.nnic	chr1	-	1958	10	NNC	ENSG00000227232.5	novel	1351	11	NA	NA	206	0	intron_retention	TRUE	canonical	3	61	junction_3	90.4156383283389	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACAGTGTGCTTTTAATA	NA	False	NA	NA	False	AATAAA	-15	NA	29364	14403	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_14830_14969_15039_15795_15948_16606_16766_16857_17056_17232_17743_17914_18062_18267_18367_24737_24892_29320
transcript_26602.known	chr10	+	5245	6	FSM	ENSG00000099194.6	ENST00000370355.3	5245	6	0	0	0	0	multi-exon	FALSE	canonical	3	3457	junction_3	221.495282116798	432	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCACTGGGTCTGGGAGTT	100288588	True	NA	27	True	AATAAA	-17	NA	100347232	100364826	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_100347532_100348063_100348347_100352365_100352497_100354426_100354633_100356531_100356765_100360733
transcript_26612.known	chr10	+	5893	5	FSM	ENSG00000235823.4	ENST00000658059.1	5893	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	33.9733351321297	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAATGAACTCAAACAAAT	100373457	True	NA	NA	False	NA	NA	NA	100373568	100411616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_100374013_100380982_100381110_100381215_100381449_100395108_100395230_100406648
transcript_26613.known	chr10	+	7587	4	FSM	ENSG00000235823.4	ENST00000654233.1	7587	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	103.237590053236	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTCTCATGAATAAAACAT	100373478	True	NA	NA	False	NA	NA	NA	100373520	100413389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_100374013_100381215_100381449_100395108_100395230_100406648
transcript_26614.known	chr10	+	1752	4	FSM	ENSG00000235823.4	ENST00000666713.1	1752	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	27.0102861065105	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTATGTTAATTTTGCA	100373523	False	NA	13	True	TTTAAA	-14	NA	100373565	100383372	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_100374013_100380982_100381110_100381215_100381449_100382427
transcript_26615.known	chr10	+	1125	4	FSM	ENSG00000235823.4	ENST00000666045.1	1125	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	27.9404127862612	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	100373456	True	NA	19	True	AATAAA	-22	NA	100373567	100388360	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_100374013_100380982_100381110_100381215_100381449_100388040
transcript_26616.nic	chr10	+	1663	3	NIC	ENSG00000235823.4	novel	1752	4	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	104	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTATGTTAATTTTGCA	100373485	False	NA	13	True	TTTAAA	-14	NA	100373527	100383372	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_100374013_100381215_100381449_100382427
transcript_26617.known	chr10	+	1002	3	FSM	ENSG00000235823.4	ENST00000662018.1	1002	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	109.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	100373456	True	NA	19	True	AATAAA	-22	NA	100373567	100388360	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_100374013_100381215_100381453_100388040
transcript_26618.known	chr10	+	2726	3	FSM	ENSG00000235823.4	ENST00000656449.1	2726	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	5.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTATGTTAATTTTGCA	100373459	True	NA	13	True	TTTAAA	-14	NA	100373570	100383372	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_100374013_100380982_100381110_100381215
transcript_26619.known	chr10	+	2499	2	FSM	ENSG00000235823.4	ENST00000664225.1	2499	2	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTAATTCTAATCACAAA	100373390	False	NA	54	True	NA	NA	NA	100373711	100383413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_100374013_100381215
transcript_26636.known	chr10	+	12927	8	FSM	ENSG00000166135.14	ENST00000299163.7	12927	8	0	0	0	0	multi-exon	TRUE	canonical	3	513	junction_3	34.795026620927	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCTCTCTTTGGAAAAT	100527488	True	NA	10	True	ATTAAA	-23	NA	100535942	100559998	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_100536136_100536410_100536662_100540633_100540783_100544950_100545097_100545942_100546050_100546517_100546582_100547139_100547251_100548092
transcript_26642.known	chr10	-	678	5	FSM	ENSG00000166136.16	ENST00000299166.9	678	5	0	0	0	0	multi-exon	FALSE	canonical	3	3330	junction_1	411.526047170771	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGCCTCATTTCCCCAG	-100502635	True	NA	-21	True	AATAAA	-17	NA	100529871	100523739	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_100523930_100526398_100526555_100526974_100527075_100529379_100529507_100529766
transcript_26643.known	chr10	-	713	5	FSM	ENSG00000166136.16	ENST00000370322.5	713	5	0	0	0	0	multi-exon	FALSE	canonical	3	366	junction_4	1579.51535288518	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTGCCTCATTTCCC	-100529989	False	NA	-24	True	AATAAA	-14	NA	100530000	100523742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_100523930_100526398_100526555_100526974_100527075_100529379_100529507_100529857
transcript_26647.known	chr10	-	829	4	FSM	ENSG00000166136.16	ENST00000466088.5	829	4	0	0	0	0	multi-exon	FALSE	canonical	3	3719	junction_3	325.889892789301	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCCTTTGTTGGACTTGT	-100502626	True	NA	NA	False	NA	NA	NA	100529862	100526048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_100526555_100526974_100527075_100529379_100529507_100529766
transcript_26649.known	chr10	-	585	3	FSM	ENSG00000166136.16	ENST00000531418.5	585	3	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_1	1689.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCAGAACCTAGACAGAGG	-100502643	True	NA	NA	False	NA	NA	NA	100529879	100526743	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_100527075_100529365_100529507_100529766
transcript_26650.known	chr10	+	6892	20	FSM	ENSG00000119906.13	ENST00000238961.9	6892	20	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	12.892266143537	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTTTGGTAATATTTG	100911527	True	NA	9	True	ATTAAA	-22	NA	100912962	100965134	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_100913251_100915998_100916043_100916569_100917301_100918383_100918442_100923974_100924973_100925948_100926020_100929316_100929440_100929829_100929998_100930975_100931079_100937401_100937478_100938594_100938737_100944025_100944129_100945329_100945507_100947038_100947137_100947759_100947848_100950075_100950208_100950675_100950754_100956450_100956538_100959427_100959497_100961876
transcript_26660.nic	chr10	+	997	3	ISM	ENSG00000119906.13	ENST00000370271.7	2931	6	-3	9529	-3	3345	5prime_fragment	FALSE	canonical	3	56	junction_1	4.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAACCAAGGCAGGAACA	100911524	True	NA	NA	False	AAGAAA	-2	NA	100912959	100917231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_100913251_100915998_100916043_100916569
transcript_26661.nic	chr10	+	1050	3	ISM	ENSG00000119906.13	ENST00000370271.7	2931	6	-3	9476	-3	3398	5prime_fragment	FALSE	canonical	3	56	junction_1	4.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCTGTCAAATGTGGTAT	100911524	True	NA	NA	False	NA	NA	NA	100912959	100917284	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_100913251_100915998_100916043_100916569
transcript_26662.known	chr10	+	891	1	FSM	ENSG00000119906.13	ENST00000609386.1	891	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAACTTGGTACTGTCTTTT	100911560	True	NA	NA	False	AATAAA	-19	NA	100912995	100913886	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_100913000_100913900
transcript_26663.known	chr10	+	2931	6	FSM	ENSG00000119906.13	ENST00000370271.7	2931	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	9.89141041510259	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTGGGTGTCGTGGCGG	100911527	True	NA	NA	False	AATAAA	-9	NA	100912962	100926760	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_100913251_100915998_100916043_100916569_100917301_100918383_100918442_100923974_100924973_100925948
transcript_26674.known	chr10	-	884	6	FSM	ENSG00000055950.17	ENST00000370242.8	884	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	253.245651492775	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCAGTGTCTCATACAGTG	-100976740	True	NA	NA	False	NA	NA	NA	100987497	100979197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_100979373_100983754_100983818_100983947_100984075_100986748_100986976_100987089_100987197_100987312
transcript_26678.known	chr10	-	894	6	FSM	ENSG00000055950.17	ENST00000342071.5	894	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	244.263300559048	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTGCCAGGCTCTGTG	-100976758	True	NA	-13	True	AGTAAA	-17	NA	100987515	100981376	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_100981544_100983754_100983818_100983947_100984075_100986748_100986976_100987089_100987197_100987312
transcript_26679.known	chr10	+	3616	5	FSM	ENSG00000107815.10	ENST00000311916.8	3616	5	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_4	21.6679486800205	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTCTGTGCTTTTTCT	100980397	True	NA	14	True	ACTAAA	-17	NA	100987542	100994403	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_100989454_100989643_100989885_100990435_100990544_100990868_100991011_100993189
transcript_26680.known	chr10	+	3665	5	FSM	ENSG00000107815.10	ENST00000370228.2	3665	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	46.7145587584856	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTTTCTGTGCTTTTT	100980390	True	NA	12	True	ACTAAA	-15	NA	100987535	100994401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_100989454_100989643_100989885_100990435_100990544_100990868_100991055_100993189
transcript_26681.known	chr10	+	3722	5	FSM	ENSG00000107815.10	ENST00000643860.1	3722	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	59.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTTTCTGTGCTTTTT	100980409	True	NA	12	True	ACTAAA	-15	NA	100987554	100994401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_100989454_100989643_100989885_100990435_100990664_100990868_100991011_100993189
transcript_26682.known	chr10	+	946	5	FSM	ENSG00000107815.10	ENST00000473656.5	946	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	54.4948392051945	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTATCCTGTGGTCCTGA	100980404	True	NA	NA	False	CATAAA	-15	NA	100987549	100993580	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_100987614_100989643_100989885_100990435_100990544_100990868_100991011_100993189
transcript_26686.known	chr10	-	2134	5	FSM	ENSG00000055950.17	ENST00000318325.6	2134	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	253.610306375746	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGCTCTGAGTCTCTTCT	-100976740	True	NA	-6	True	AATAAA	-16	NA	100987497	100977820	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_100979373_100983754_100983818_100986748_100986976_100987089_100987197_100987312
transcript_26688.known	chr10	-	747	5	FSM	ENSG00000055950.17	ENST00000299179.9	747	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	238.890142115576	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGCCAGGCTCTGTGT	-100976737	True	NA	-12	True	AGTAAA	-18	NA	100987494	100981375	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_100981544_100983754_100983818_100986748_100986976_100987089_100987197_100987312
transcript_26692.known	chr10	-	866	4	FSM	ENSG00000055950.17	ENST00000370236.5	866	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	238.302795246347	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGGTCTGTCTTCAAAA	-100976726	True	NA	-40	True	AATAAA	-17	NA	100987483	100986273	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_100986573_100986686_100986976_100987089_100987197_100987312
transcript_26693.known	chr10	-	798	4	FSM	ENSG00000055950.17	ENST00000370234.4	798	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	240.655124376958	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACATTTCAGGTCTGTCT	-100976726	True	NA	-46	True	AATAAA	-11	NA	100987483	100986279	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_100986573_100986748_100986976_100987089_100987197_100987312
transcript_26694.known	chr10	-	1010	3	FSM	ENSG00000055950.17	ENST00000318364.13	999	3	-18	7	0	0	multi-exon	FALSE	canonical	3	514	junction_1	18.5	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCAGGTCTGTCTTCAA	-100976758	True	NA	-42	True	AATAAA	-15	NA	100987515	100986275	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_100986976_100987089_100987197_100987312
transcript_26696.known	chr10	-	810	2	FSM	ENSG00000055950.17	ENST00000487059.1	810	2	0	0	0	0	multi-exon	FALSE	canonical	3	551	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTCTTTCCAGTGCCT	-100976756	True	NA	NA	False	AATGAA	-7	NA	100987513	100986587	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_100987197_100987312
transcript_26697.known	chr10	-	897	2	FSM	ENSG00000055950.17	ENST00000493646.1	897	2	0	0	0	0	multi-exon	FALSE	canonical	3	514	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCAGGTCTGTCTTCAA	-100976529	False	NA	-42	True	AATAAA	-15	NA	100987286	100986275	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_100986976_100987089
transcript_26698.known	chr10	-	903	2	FSM	ENSG00000055950.17	ENST00000477279.1	903	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCAGGTCTGTCTTCAA	-100976758	True	NA	-42	True	AATAAA	-15	NA	100987515	100986275	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_100986976_100987312
transcript_26702.known	chr10	+	3089	12	FSM	ENSG00000107819.14	ENST00000393459.5	3098	12	5	4	5	0	multi-exon	TRUE	canonical	0	0	junction_4	3.73723723474445	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTGGTCTTCACTTGA	101031108	True	NA	4	True	AATAAA	-15	NA	101031238	101041240	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_101031535_101032313_101032483_101034691_101034856_101035496_101035668_101036002_101036102_101036485_101036562_101036722_101036809_101037075_101037204_101037381_101037432_101038642_101038693_101039174_101039223_101039488
transcript_26703.known	chr10	-	2032	10	FSM	ENSG00000186862.20	ENST00000370215.7	2032	10	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	2.26623089493013	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACATCATCAGACATCTG	-101030989	True	NA	NA	False	NA	NA	NA	101031133	101017331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101017616_101018098_101018297_101018821_101019218_101020617_101020679_101021797_101021946_101022208_101022386_101023435_101023611_101023927_101024069_101029993_101030385_101031072
transcript_26711.known	chr10	+	2883	5	FSM	ENSG00000107816.17	ENST00000370223.7	2883	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	161.476778516293	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAATGTGCTGGATAAAG	100994408	True	NA	NA	False	ATTAAA	-25	NA	100997071	101007836	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_100997235_101002496_101002947_101003506_101004167_101005457_101005716_101006484
transcript_26712.nnic	chr10	+	2935	5	NNC	ENSG00000107816.17	novel	2883	5	NA	NA	-111	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	195.292088933474	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAATGTGCTGGATAAAG	100996925	False	NA	NA	False	ATTAAA	-25	NA	100996960	101007836	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_100997176_101002496_101002947_101003506_101004167_101005457_101005716_101006484
transcript_26714.nnic	chr10	+	2687	5	NNC	ENSG00000107816.17	novel	2883	5	NA	NA	-106	0	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_1	196.540549251293	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAATGTGCTGGATAAAG	100996931	True	NA	NA	False	ATTAAA	-25	NA	100996965	101007836	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_100997235_101002798_101002947_101003506_101004167_101005457_101005716_101006484
transcript_26718.nic	chr10	+	2884	5	NIC	ENSG00000107816.17	novel	5741	4	NA	NA	-101	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	195.292088933474	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAATGTGCTGGATAAAG	100998233	False	NA	NA	False	ATTAAA	-25	NA	100998246	101007836	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_100998411_101002496_101002947_101003506_101004167_101005457_101005716_101006484
transcript_26722.nic	chr10	+	2894	5	NIC	ENSG00000107816.17	novel	5741	4	NA	NA	-74	0	combination_of_known_junctions	FALSE	canonical	3	268	junction_1	93.9521154631443	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAATGTGCTGGATAAAG	100998457	True	NA	NA	False	ATTAAA	-25	NA	100999778	101007836	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_100999953_101002496_101002947_101003506_101004167_101005457_101005716_101006484
transcript_26737.known	chr10	-	2126	10	FSM	ENSG00000186862.20	ENST00000645349.1	2126	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.38113867882288	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTCTTGGCTCAGCTGCTG	-101030960	True	NA	NA	False	AATAAA	-3	NA	101031104	101017376	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101017784_101018098_101018297_101018821_101019218_101020617_101020679_101021797_101021946_101022208_101022386_101023435_101023611_101023927_101024069_101029993_101030385_101031072
transcript_26738.known	chr10	-	1057	4	FSM	ENSG00000186862.20	ENST00000470414.1	1057	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	2.49443825784929	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGGGCAACATAGCAAGA	-101030970	True	NA	NA	False	AAAACA	-45	NA	101031114	101023127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101023611_101023927_101024069_101029993_101030385_101031072
transcript_26739.known	chr10	-	977	1	FSM	ENSG00000273162.1	ENST00000609242.1	977	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTTAGAAGGGAGTTTT	-101060946	True	NA	NA	False	ATTAAA	-20	NA	101061005	101060028	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101060000_101061000
transcript_26742.nic	chr10	+	2868	6	NIC	ENSG00000107821.15	novel	3232	5	NA	NA	-868	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_5	7.39188744503053	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATTCATTTAATGTAT	NA	False	NA	11	True	AATAAA	-16	NA	101061120	101068131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_101062116_101062541_101063104_101064260_101064422_101064500_101064649_101064825_101064944_101067247
transcript_26745.known	chr10	+	3232	5	FSM	ENSG00000107821.15	ENST00000370200.6	3232	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	5.1234753829798	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTATTCACCGCAAATAAA	101061780	True	NA	18	True	AATAAA	-18	NA	101061988	101067059	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_101062116_101062541_101063104_101064260_101064422_101064500_101064649_101064825
transcript_26750.known	chr10	+	2111	3	FSM	ENSG00000107807.13	ENST00000370196.11	2111	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	1.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGGGCTGCCTGCTCCTT	101131108	True	NA	8	True	AATAAA	-21	NA	101131299	101137789	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_101132110_101134174_101134377_101136690
transcript_26751.nic	chr10	+	2217	3	NIC	ENSG00000107807.13	novel	2111	3	NA	NA	-70	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	4	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGGGCTGCCTGCTCCTT	NA	False	NA	8	True	AATAAA	-21	NA	101131229	101137789	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_101132110_101134138_101134377_101136690
transcript_26752.known	chr10	+	469	2	FSM	ENSG00000107807.13	ENST00000463716.3	469	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCACACGCCTGCAGATC	101131708	False	NA	NA	False	NA	NA	NA	101131727	101134225	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_101132110_101134138
transcript_26753.known	chr10	+	6024	15	FSM	ENSG00000166167.18	ENST00000370187.8	6024	15	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	26.2180806906616	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTAAGCGTCTTGTCTC	101351651	True	NA	15	True	ATTAAA	-6	NA	101354164	101557313	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_101354229_101430344_101430453_101461980_101462059_101479367_101479458_101521638_101521871_101526012_101526200_101531236_101531334_101532294_101532433_101532951_101533071_101534660_101534911_101535353_101535473_101536542_101536654_101538292_101538372_101550698_101550892_101553154
transcript_26764.known	chr10	-	2781	9	FSM	ENSG00000166169.17	ENST00000370162.8	2781	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	25.3475837112732	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGTGTCTGAGCTG	-101586445	False	NA	-5	True	AGTAAA	-18	NA	101588257	101578881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101579818_101580247_101580417_101582762_101582892_101583507_101583682_101584601_101584920_101585315_101585479_101585861_101586157_101587245_101587407_101587821
transcript_26765.known	chr10	-	2670	9	FSM	ENSG00000166169.17	ENST00000299206.8	2670	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	21.5928228816892	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGTGTCTGAGCTG	-101586397	True	NA	-5	True	AGTAAA	-18	NA	101588209	101578881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101579818_101580247_101580417_101582762_101582892_101583507_101583682_101584601_101584920_101585315_101585479_101585861_101586157_101587245_101587407_101587884
transcript_26766.nnic	chr10	-	2528	9	NNC	ENSG00000166169.17	novel	2781	9	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_8	29.4785409238653	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGTGTCTGAGCTG	-101586401	True	NA	-5	True	AGTAAA	-18	NA	101588213	101578881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_101579818_101580247_101580417_101582762_101582892_101583507_101583682_101584601_101584920_101585315_101585479_101585861_101586157_101587245_101587407_101588030
transcript_26767.nic	chr10	-	2411	9	NIC	ENSG00000166169.17	novel	2781	9	NA	NA	1	0	intron_retention	FALSE	canonical	2	12	junction_8	25.6633858833943	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGTGTCTGAGCTG	NA	False	NA	-5	True	AGTAAA	-18	NA	101588269	101578881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_101579818_101580247_101580417_101582762_101582892_101583507_101583682_101584601_101584920_101585315_101585479_101585861_101586157_101587245_101587407_101588203
transcript_26779.known	chr10	-	2360	8	FSM	ENSG00000166169.17	ENST00000370169.5	2360	8	0	0	0	0	multi-exon	TRUE	canonical	3	72	junction_5	8.09635846588843	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGTGTCTGAGCTG	-101585609	False	1812	-5	True	AGTAAA	-18	NA	101587421	101578881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101579818_101580247_101580417_101582762_101582892_101583507_101583682_101584601_101584920_101585315_101585479_101585861_101586157_101587245
transcript_26782.nic	chr10	-	2895	8	NIC	ENSG00000166169.17	novel	2781	9	NA	NA	0	0	intron_retention	FALSE	canonical	2	9	junction_4	28.2886001413853	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGTGTCTGAGCTG	-101586420	True	NA	-5	True	AGTAAA	-18	NA	101588232	101578881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_101579818_101580247_101580417_101582762_101582892_101583507_101583682_101584877_101584920_101585315_101585479_101585861_101586157_101587245
transcript_2679.known	chr1	+	3320	7	FSM	ENSG00000132879.14	ENST00000376770.5	3320	7	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	72.2905019118464	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTCGGGTATTTCTT	11654806	False	NA	NA	False	ATTAAA	-22	NA	11654856	11663327	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11654953_11655327_11655700_11655805_11656101_11658266_11658394_11658532_11658629_11658735_11658872_11661129
transcript_26799.known	chr10	+	641	7	FSM	ENSG00000166171.13	ENST00000370147.5	641	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_5	242.784998621323	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGGGACTGCAAGACCCA	101583266	True	NA	NA	False	ACTAAA	-26	NA	101588324	101609447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_101588401_101594657_101594739_101600737_101600863_101601202_101601337_101605139_101605213_101608866_101608938_101609366
transcript_26820.known	chr10	+	819	6	FSM	ENSG00000166171.13	ENST00000370151.9	819	6	0	0	0	0	multi-exon	FALSE	canonical	3	452	junction_4	41.5855744219074	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGACTGCCCTCTTGTTC	101583262	True	NA	32	True	AGTAAA	-24	NA	101588320	101609662	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_101588401_101594657_101594739_101600737_101600863_101601202_101601337_101608834_101608938_101609366
transcript_26825.known	chr10	-	1953	6	FSM	ENSG00000166169.17	ENST00000628479.2	1953	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	39.1744814898679	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGCCTGGTGTCTGAGC	NA	False	NA	-7	True	AGTAAA	-16	NA	101588270	101578883	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101579818_101580247_101580417_101582762_101582892_101583507_101583682_101587245_101587407_101587884
transcript_26826.known	chr10	-	784	6	FSM	ENSG00000166169.17	ENST00000429502.1	784	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	41.844473948181	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGCGAGTTTGCCTGTGC	-101586420	True	NA	NA	False	NA	NA	NA	101588232	101579695	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101579818_101580247_101580417_101582762_101582892_101583507_101583682_101587245_101587407_101588203
transcript_26837.known	chr10	-	2289	5	FSM	ENSG00000166169.17	ENST00000339310.7	2289	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	38.7846619167939	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGTGTCTGAGCTG	-101586314	True	NA	-5	True	AGTAAA	-18	NA	101588126	101578881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101579818_101580247_101580417_101582762_101582892_101583507_101583682_101587245
transcript_26873.known	chr10	-	2308	9	FSM	ENSG00000166169.17	ENST00000370172.5	2308	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	37.5757568120723	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGTGTCTGAGCTG	-101586436	True	NA	-5	True	AGTAAA	-18	NA	101588248	101578881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101579818_101580247_101580417_101582762_101582892_101583507_101583682_101584601_101584920_101585315_101585479_101585861_101586157_101587121_101587201_101588203
transcript_26874.known	chr10	-	2482	9	FSM	ENSG00000107829.15	ENST00000664783.1	2482	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	30.6879455161143	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCTGGTTCCTCACTGGC	-101695225	False	NA	-14	True	AATAAA	-15	NA	101695259	101610666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101611411_101611627_101611770_101612336_101612478_101624744_101624811_101667885_101667981_101672914_101673048_101673487_101673674_101676340_101676437_101694380
transcript_26876.known	chr10	-	1114	6	FSM	ENSG00000107831.14	ENST00000344255.8	1114	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	7.93977329651168	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTCTATTTTTGTATTC	-101776095	False	17501	29	True	TTTAAA	-9	NA	101776114	101770130	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101770620_101771462_101771570_101774731_101774880_101775129_101775217_101775739_101775777_101775868
transcript_26878.known	chr10	-	1169	6	FSM	ENSG00000107831.14	ENST00000320185.7	1169	6	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_3	9.57078889120432	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCTGTGGTGTCTGTCT	-101776095	False	17501	51	True	TTTAAA	-31	NA	101776114	101770108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101770620_101771462_101771570_101774731_101774913_101775129_101775217_101775739_101775777_101775868
transcript_26879.known	chr10	-	694	5	FSM	ENSG00000107831.14	ENST00000346714.7	694	5	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_3	9.33742469849155	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGCCCTCCCCACAATG	-101775955	False	NA	NA	False	NA	NA	NA	101775974	101770323	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101770620_101771462_101771570_101774731_101774880_101775739_101775777_101775868
transcript_2688.known	chr1	+	959	6	FSM	ENSG00000132879.14	ENST00000376768.5	959	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	83.0002409635056	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCAGCCTCTTCTTTGTGG	11653191	True	NA	NA	False	NA	NA	NA	11654880	11661391	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11654953_11655805_11656101_11658266_11658365_11658532_11658629_11658735_11658872_11661129
transcript_26880.known	chr10	-	823	5	FSM	ENSG00000107831.14	ENST00000347978.2	823	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	10.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGCCCTCCCCACAATG	-101776051	False	NA	NA	False	NA	NA	NA	101776070	101770323	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101770620_101771462_101771570_101774731_101774913_101775739_101775777_101775868
transcript_26885.known	chr10	-	877	6	FSM	ENSG00000107833.10	ENST00000370110.5	877	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_5	7.19444229944198	2169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGTGTGGCTTCTTCC	-101765912	True	NA	-6	True	AATAAA	-20	NA	101783413	101781324	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101781633_101781726_101781855_101782257_101782352_101782477_101782598_101782838_101782925_101783272
transcript_26890.known	chr10	-	755	5	FSM	ENSG00000107833.10	ENST00000474993.5	755	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	30.3016088681773	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCAGCTCTTGTGTGGC	-101765883	True	NA	-13	True	AATAAA	-13	NA	101783384	101781331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101781633_101781726_101781855_101782257_101782352_101782477_101782598_101783272
transcript_26893.known	chr10	-	481	5	FSM	ENSG00000107833.10	ENST00000462391.5	481	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	27.5170401751351	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGTTTCAACAATTGTAAA	-101765874	True	NA	NA	False	NA	NA	NA	101783375	101781588	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101781633_101781726_101781855_101782477_101782598_101782838_101782925_101783272
transcript_26900.known	chr10	-	5174	16	FSM	ENSG00000198408.14	ENST00000361464.8	5174	16	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_2	174.480562432228	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTCGTGTTGTATTGT	-101800977	True	NA	-7	True	AATAAA	-13	NA	101818444	101784449	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101786588_101787363_101787524_101790895_101791089_101791353_101791440_101792838_101792944_101793912_101793999_101797979_101798155_101798841_101799456_101800241_101800401_101803734_101804020_101806044_101806144_101807729_101807902_101810183_101810315_101813029_101813128_101813554_101813607_101817823
transcript_2691.known	chr1	+	2928	6	FSM	ENSG00000132879.14	ENST00000251547.10	2928	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	65.6219475480574	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTCGGGTATTTCTT	11653187	True	NA	NA	False	ATTAAA	-22	NA	11654876	11663327	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11654953_11655805_11656101_11658266_11658394_11658532_11658629_11658735_11658872_11661129
transcript_26916.known	chr10	-	3314	10	FSM	ENSG00000198408.14	ENST00000370094.7	3314	10	0	0	0	0	multi-exon	FALSE	canonical	3	489	junction_3	187.621960335138	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGTT	-101800951	True	NA	NA	False	NA	NA	NA	101818418	101797045	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101798155_101798841_101799456_101800241_101800401_101803734_101804020_101806044_101806144_101807729_101807902_101810183_101810315_101813029_101813128_101813554_101813607_101817823
transcript_26928.nic	chr10	-	2234	9	ISM	ENSG00000198408.14	ENST00000370094.7	3314	10	-47	1814	0	-1814	5prime_fragment	FALSE	canonical	3	489	junction_2	180.925355810069	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAGACTCTGAAAAAGT	-101800998	True	NA	-13	True	NA	NA	NA	101818465	101798859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_101799456_101800241_101800401_101803734_101804020_101806044_101806144_101807729_101807902_101810183_101810315_101813029_101813128_101813554_101813607_101817823
transcript_26929.nic	chr10	-	2030	9	ISM	ENSG00000198408.14	ENST00000370094.7	3314	10	-260	2231	-213	-2231	5prime_fragment	FALSE	canonical	3	489	junction_2	180.925355810069	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCCTGATGAAGAACCCAT	-101818656	False	NA	16	True	AAGAAA	-6	NA	101818678	101799276	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_101799456_101800241_101800401_101803734_101804020_101806044_101806144_101807729_101807902_101810183_101810315_101813029_101813128_101813554_101813607_101817823
transcript_26937.nic	chr10	-	1564	8	ISM	ENSG00000198408.14	ENST00000370094.7	3314	10	-94	3317	-47	-3317	5prime_fragment	FALSE	canonical	3	489	junction_1	179.608303976021	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGAAAATGAAGGCAGTGA	-101818490	False	NA	NA	False	GATAAA	-2	NA	101818512	101800362	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_101800401_101803734_101804020_101806044_101806144_101807729_101807902_101810183_101810315_101813029_101813128_101813554_101813607_101817823
transcript_26940.nic	chr10	-	1454	7	ISM	ENSG00000198408.14	ENST00000370094.7	3314	10	-35	6702	-9	-1	5prime_fragment	FALSE	canonical	3	686	junction_4	139.386752120374	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTAGTGATGAGTAAGTA	-101800986	True	NA	NA	False	NA	NA	NA	101818453	101803747	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_101804020_101806044_101806144_101807729_101807902_101810183_101810315_101813029_101813128_101813554_101813607_101817823
transcript_26949.known	chr10	-	2089	8	FSM	ENSG00000120049.20	ENST00000348850.9	2089	8	0	0	0	0	multi-exon	TRUE	canonical	2	12	junction_5	6.06428150765461	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCTGCCGTCTCTGCCTT	-101839590	True	NA	-3	True	AATAAA	-17	NA	101839872	101825973	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101827401_101827688_101827752_101827888_101827994_101828150_101828259_101828388_101828460_101828626_101828697_101829074_101829200_101839752
transcript_2695.known	chr1	+	822	6	FSM	ENSG00000132879.14	ENST00000376760.5	822	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	83.2836118333013	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGGAGGCCAGGTGTCC	11653220	True	NA	NA	False	NA	NA	NA	11654909	11661349	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11654953_11655669_11655700_11655805_11656101_11658266_11658365_11658735_11658872_11661129
transcript_26953.known	chr10	-	4099	26	FSM	ENSG00000120029.13	ENST00000370033.9	4099	26	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_4	23.2804123674818	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTGTTGCTTTTTTTTT	-102053398	True	NA	0	True	ATTAAA	-23	NA	102056173	101845598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_101847621_101849775_101849893_101889411_101889491_101939862_101939939_101956596_101956724_101957649_101957733_101975211_101975301_101990550_101990612_101991968_101992039_101993537_101993604_101995296_101995356_102001970_102002073_102006539_102006634_102009373_102009450_102009976_102010024_102011722_102011784_102012832_102012877_102013967_102014025_102023476_102023564_102023674_102023750_102025155_102025249_102029637_102029746_102033025_102033173_102033282_102033340_102040012_102040126_102056084
transcript_26967.known	chr10	-	724	5	FSM	ENSG00000120029.13	ENST00000311122.5	724	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_4	6.04152298679729	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAATGGAGGTATTCTTT	-102053418	True	NA	-4	True	AATAAA	-20	NA	102056193	102029447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_102029746_102033025_102033173_102033282_102033340_102040012_102040126_102056084
transcript_26968.known	chr10	+	2688	1	FSM	ENSG00000166189.8	ENST00000299238.7	2688	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	442	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACAGTTGTGTGTTTTTA	102064800	True	NA	7	True	AATATA	-17	NA	102065348	102068036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102065300_102068000
transcript_26971.known	chr10	-	2285	11	FSM	ENSG00000198728.11	ENST00000361198.9	2285	11	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_10	138.85175548044	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCATGTCCCCCCCTCT	-102114922	False	4440	-2	True	ATTAAA	-21	NA	102114946	102107559	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_102108324_102109028_102109178_102109383_102109508_102109599_102109684_102109920_102110044_102110528_102110702_102110868_102110972_102111068_102111145_102111255_102111301_102111433_102111537_102114405
transcript_26974.known	chr10	-	3098	11	FSM	ENSG00000198728.11	ENST00000673968.1	3098	11	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	85.6213174390584	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTCCTGGTTGGTCATT	-102115928	True	NA	-7	True	AATAAA	-18	NA	102120368	102106488	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_102108324_102109028_102109178_102109383_102109508_102109599_102109684_102109920_102110044_102110528_102110702_102110868_102110972_102111068_102111145_102111255_102111301_102111433_102111537_102120085
transcript_26978.nic	chr10	-	3439	11	NIC	ENSG00000198728.11	novel	2285	11	NA	NA	-92	-3	combination_of_known_junctions	FALSE	canonical	3	41	junction_10	145.477283450029	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGAGTGTCCTGGTTGGTC	-102115014	False	NA	-10	True	AATAAA	-15	NA	102115038	102106491	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_102108324_102109034_102109178_102109383_102109508_102109599_102109684_102109920_102110044_102110528_102110702_102110868_102110972_102111068_102111145_102111255_102111301_102111433_102111537_102114405
transcript_2698.nic	chr1	+	2190	6	NIC	ENSG00000132879.14	novel	822	6	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_1	73.413895142541	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTGCCCTGTGGTTTC	11654729	False	NA	15	True	AATAAA	-16	NA	11654823	11662289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_11654953_11655327_11655700_11655805_11656101_11658266_11658365_11658735_11658872_11661129
transcript_26984.nic	chr10	-	2371	11	NIC	ENSG00000198728.11	novel	2285	11	NA	NA	-92	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_10	145.477283450029	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCATGTCCCCCCCTCT	-102115014	False	NA	-2	True	ATTAAA	-21	NA	102115038	102107559	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_102108324_102109034_102109178_102109383_102109508_102109599_102109684_102109920_102110044_102110528_102110702_102110868_102110972_102111068_102111145_102111255_102111301_102111433_102111537_102114405
transcript_26985.known	chr10	-	1938	11	FSM	ENSG00000198728.11	ENST00000425280.2	1938	11	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	97.4168363271976	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCATGTCCCCCCCTCT	-102120261	False	NA	-2	True	ATTAAA	-21	NA	102120285	102107559	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_102108324_102109034_102109178_102109383_102109508_102109599_102109684_102109920_102110044_102110528_102110702_102110868_102110972_102111068_102111145_102111255_102111301_102111433_102111537_102120085
transcript_26986.nic	chr10	-	4149	10	NIC	ENSG00000198728.11	novel	2285	11	NA	NA	-92	-4	intron_retention	FALSE	canonical	3	41	junction_9	128.446655113617	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGAGTGTCCTGGTTGGT	-102115014	False	NA	-11	True	AATAAA	-14	NA	102115038	102106492	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_102109178_102109383_102109508_102109599_102109684_102109920_102110044_102110528_102110702_102110868_102110972_102111068_102111145_102111255_102111301_102111433_102111537_102114405
transcript_26988.nic	chr10	-	3082	10	NIC	ENSG00000198728.11	novel	2285	11	NA	NA	-92	0	intron_retention	FALSE	canonical	3	41	junction_9	128.446655113617	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCATGTCCCCCCCTCT	-102115014	False	NA	-2	True	ATTAAA	-21	NA	102115038	102107559	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_102109178_102109383_102109508_102109599_102109684_102109920_102110044_102110528_102110702_102110868_102110972_102111068_102111145_102111255_102111301_102111433_102111537_102114405
transcript_26997.known	chr10	+	5328	14	FSM	ENSG00000148840.11	ENST00000278070.7	5328	14	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_7	69.6324246038655	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTGTGCGTCTTTAT	102125108	True	NA	16	True	AATAAA	-24	NA	102133039	102150333	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102133222_102137849_102138039_102138618_102138766_102138878_102138981_102139099_102142005_102143044_102143099_102144249_102144308_102145019_102145091_102146671_102147393_102148371_102148522_102148627_102148695_102148816_102148939_102149177_102149330_102149925
transcript_27.known	ERCC-00071	+	626	1	FSM	ERCC-00071A	DQ883654	626	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	626	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00071_+_0_600
transcript_2700.nic	chr1	+	2454	6	NIC	ENSG00000132879.14	novel	3320	7	NA	NA	-33	0	intron_retention	FALSE	canonical	3	47	junction_1	70.2783039066823	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTGCCCTGTGGTTTC	11654729	False	NA	15	True	AATAAA	-16	NA	11654823	11662289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_11654953_11655327_11655700_11655805_11656101_11658266_11658629_11658735_11658872_11661129
transcript_27005.nnic	chr10	+	5144	13	NIC	ENSG00000148840.11	novel	5328	14	NA	NA	23	0	combination_of_known_splicesites	FALSE	canonical	3	32	junction_5	112.762533178751	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAAAGGGGTATTTG	102125085	True	NA	28	True	AATAAA	-18	NA	102133016	102150180	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_102133222_102137849_102138039_102138618_102138766_102138878_102138981_102139099_102142005_102144249_102144308_102145019_102145091_102146671_102147393_102148371_102148522_102148627_102148695_102148816_102148939_102149177_102149330_102149925
transcript_27011.known	chr10	+	4580	12	FSM	ENSG00000148840.11	ENST00000413464.6	4580	12	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_7	107.094227452832	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGCTGTTGTGCGTCTTT	102125062	True	NA	14	True	AATAAA	-22	NA	102132993	102150331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102133222_102137849_102138039_102138618_102138766_102138878_102138981_102139099_102142005_102143044_102143099_102144249_102144308_102148371_102148522_102148627_102148695_102148816_102148939_102149177_102149330_102149925
transcript_27024.nic	chr10	+	4123	6	ISM	ENSG00000148840.11	ENST00000413464.6	4580	12	23	6712	23	-1215	5prime_fragment	FALSE	canonical	3	301	junction_5	18.3477519058875	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATCCAAGCAGGTTGGGG	102125085	True	NA	NA	False	NA	NA	NA	102133016	102143619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_102133222_102137849_102138039_102138618_102138766_102138878_102138981_102139099_102142005_102143044
transcript_2703.nic	chr1	+	2645	6	NIC	ENSG00000132879.14	novel	3320	7	NA	NA	-8	0	intron_retention	FALSE	canonical	3	57	junction_3	67.5088142393273	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTGCCCTGTGGTTTC	11653179	True	NA	15	True	AATAAA	-16	NA	11654868	11662289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_11655700_11655805_11656101_11658266_11658394_11658532_11658629_11658735_11658872_11661129
transcript_27032.known	chr10	+	3967	13	FSM	ENSG00000166197.17	ENST00000405356.5	3967	13	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_6	340.798195010218	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGGAGTTTTATTATTGT	NA	False	NA	16	True	AATAAA	-21	NA	102152175	102163871	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102152531_102157018_102157075_102157188_102157329_102157430_102157556_102158048_102158215_102159192_102159339_102159432_102159569_102159895_102160025_102160232_102160344_102160451_102161094_102161555_102161663_102161832_102161926_102162110
transcript_27036.known	chr10	+	2441	13	FSM	ENSG00000166197.17	ENST00000488254.6	2441	13	0	0	0	0	multi-exon	FALSE	canonical	3	740	junction_2	204.493276173081	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTTGTGATTTTCAAA	102127047	True	NA	4	True	ATTAAA	-15	NA	102152403	102162600	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102152531_102157018_102157075_102157185_102157329_102157430_102157556_102158048_102158215_102159192_102159309_102159432_102159569_102159895_102160025_102160232_102160344_102160451_102161094_102161555_102161663_102161832_102161926_102162110
transcript_27043.known	chr10	+	3723	13	FSM	ENSG00000166197.17	ENST00000605788.6	3723	13	0	0	0	0	multi-exon	FALSE	canonical	3	726	junction_2	207.306067338984	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGAGTTTTATTATTG	102127032	True	NA	15	True	AATAAA	-20	NA	102152388	102163870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102152531_102157018_102157075_102157188_102157329_102157430_102157556_102158048_102158215_102159192_102159309_102159432_102159569_102159895_102160025_102160232_102160344_102160451_102161094_102161555_102161663_102161832_102161926_102162110
transcript_27047.known	chr10	+	3727	13	FSM	ENSG00000166197.17	ENST00000370007.5	3727	13	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_6	340.798195010218	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGAGTTTTATTATTG	102127058	True	NA	15	True	AATAAA	-20	NA	102152414	102163870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102152531_102157018_102157075_102157188_102157329_102157430_102157556_102158048_102158215_102159192_102159339_102159432_102159569_102159895_102160025_102160232_102160344_102160451_102161094_102161555_102161663_102161832_102161926_102162110
transcript_27055.nic	chr10	+	1929	11	ISM	ENSG00000166197.17	ENST00000488254.6	2441	13	-79	946	-64	-945	5prime_fragment	FALSE	canonical	3	740	junction_2	220.427062766803	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGAAAGTAAGTTGTCTC	102126968	True	NA	NA	False	GATAAA	-30	NA	102152324	102161654	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_102152531_102157018_102157075_102157185_102157329_102157430_102157556_102158048_102158215_102159192_102159309_102159432_102159569_102159895_102160025_102160232_102160344_102160451_102161094_102161555
transcript_27059.nic	chr10	+	1894	11	ISM	ENSG00000166197.17	ENST00000605788.6	3723	13	-32	2216	-32	-945	5prime_fragment	FALSE	canonical	3	726	junction_2	223.570145591937	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGAAAGTAAGTTGTCTC	102127000	True	NA	NA	False	GATAAA	-30	NA	102152356	102161654	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_102152531_102157018_102157075_102157188_102157329_102157430_102157556_102158048_102158215_102159192_102159309_102159432_102159569_102159895_102160025_102160232_102160344_102160451_102161094_102161555
transcript_2707.known	chr1	-	1287	6	FSM	ENSG00000116661.11	ENST00000354287.5	1287	6	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_5	22.8350607619073	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAATGAATGAAAAAATGGA	-11653066	True	NA	-37	True	AATAAA	-19	NA	11654429	11648386	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_11648829_11649086_11649226_11649778_11649875_11649944_11650075_11650465_11650835_11654318
transcript_27074.known	chr10	+	3217	9	FSM	ENSG00000166197.17	ENST00000603946.5	3217	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	412.130269908678	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTGGGAGTTTTATT	102127047	True	NA	11	True	AATAAA	-16	NA	102152403	102163866	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102152531_102159192_102159309_102159432_102159569_102159895_102160025_102160232_102160344_102160451_102161094_102161555_102161663_102161832_102161926_102162110
transcript_27078.nic	chr10	+	932	7	ISM	ENSG00000166197.17	ENST00000488254.6	2441	13	-82	3051	-67	-389	5prime_fragment	FALSE	canonical	3	740	junction_2	270.962943345888	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCATGAAAAATAAACCAGG	102126965	True	NA	NA	False	NA	NA	NA	102152321	102159549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_102152531_102157018_102157075_102157185_102157329_102157430_102157556_102158048_102158215_102159192_102159309_102159432
transcript_27080.nic	chr10	+	886	7	ISM	ENSG00000166197.17	ENST00000605788.6	3723	13	-24	4321	-24	-389	5prime_fragment	FALSE	canonical	3	726	junction_2	275.135976483548	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCATGAAAAATAAACCAGG	102127008	True	NA	NA	False	NA	NA	NA	102152364	102159549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_102152531_102157018_102157075_102157188_102157329_102157430_102157556_102158048_102158215_102159192_102159309_102159432
transcript_27086.known	chr10	+	1400	4	FSM	ENSG00000119915.5	ENST00000370005.4	1400	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGAGTTGGGGGATTT	NA	False	NA	NA	False	ATTAAA	-14	NA	102226298	102229589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102226650_102227625_102227758_102228416_102228569_102228824
transcript_27087.known	chr10	-	1426	4	FSM	ENSG00000107859.10	ENST00000370002.8	1426	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.05480466765633	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGCGTGATGATTCAAAG	-102241477	True	NA	NA	False	AATAAA	-16	NA	102241512	102230188	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_102231102_102231587_102231791_102231962_102232093_102241332
transcript_27088.known	chr10	+	5736	40	FSM	ENSG00000107862.7	ENST00000676993.1	5736	40	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_17	22.795636109594	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACCCCACTTCTGGCTGT	102243897	False	NA	NA	False	NA	NA	NA	102245670	102382383	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102245782_102258928_102259035_102260049_102260117_102344050_102344183_102351255_102351375_102351842_102351952_102352457_102352519_102353599_102353655_102358038_102358187_102358505_102358730_102359269_102359436_102360183_102360396_102361021_102361121_102361717_102361913_102362474_102362665_102363255_102363397_102363709_102363799_102365396_102365600_102366382_102366507_102367084_102367211_102367477_102367561_102368217_102368455_102368738_102368833_102369210_102369388_102369710_102369776_102369860_102369985_102370173_102370246_102370383_102370479_102370706_102370861_102375358_102375585_102376271_102376433_102376559_102376801_102376934_102377129_102379283_102379435_102379520_102379652_102379852_102379955_102380248_102380363_102380505_102380687_102381126_102381256_102382055
transcript_2709.known	chr1	+	1896	5	FSM	ENSG00000132879.14	ENST00000251546.8	1896	5	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	91.4668655853036	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTGCCCTGTGGTTTC	NA	False	NA	15	True	AATAAA	-16	NA	11654374	11662289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11654582_11655805_11656101_11658266_11658365_11658735_11658872_11661129
transcript_27090.known	chr10	+	6103	38	FSM	ENSG00000107862.7	ENST00000678351.1	6103	38	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	34.7866501685469	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAGTACCAGCATCATTG	102243747	True	NA	8	True	AATAAA	-3	NA	102245520	102382882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102245782_102258928_102259035_102260049_102260117_102344050_102344183_102351255_102351375_102351842_102351952_102352457_102352519_102353599_102353655_102358038_102358187_102358505_102358730_102359269_102359436_102360183_102360396_102362474_102362665_102363255_102363397_102363709_102363799_102365396_102365600_102366382_102366507_102367084_102367211_102367477_102367561_102368217_102368455_102368738_102368833_102369210_102369388_102369710_102369776_102369860_102369985_102370173_102370246_102370383_102370479_102370706_102370861_102375358_102375585_102376271_102376433_102376559_102376801_102376934_102377141_102379283_102379435_102379520_102379652_102379852_102379955_102380248_102380363_102380505_102380687_102381126_102381256_102382055
transcript_27095.nic	chr10	+	2411	17	ISM	ENSG00000107862.7	ENST00000676807.1	3713	27	-63	6507	-14	0	5prime_fragment	FALSE	canonical	3	94	junction_16	9.2345732846732	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACATACATGTATTCCCCA	NA	False	NA	NA	False	ATTAAA	-13	NA	102245483	102363798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_102245782_102258928_102259035_102260049_102260117_102344050_102344183_102351255_102351375_102351842_102351952_102352457_102352519_102353599_102353655_102358038_102358187_102358505_102358730_102359269_102359436_102360183_102360396_102361021_102361121_102361717_102361913_102362474_102362665_102363255_102363397_102363709
transcript_27100.known	chr10	+	3411	23	FSM	ENSG00000077150.20	ENST00000428099.6	3411	23	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	13.5029840595476	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGCCCCTGATGTGACT	NA	False	NA	29	True	AATAAA	-42	NA	102394109	102402524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102394601_102395887_102395981_102396252_102396335_102396448_102396490_102396724_102396824_102396903_102397056_102397301_102397409_102397526_102397686_102397980_102398086_102398211_102398298_102398384_102398524_102398738_102398865_102399287_102399498_102399576_102399719_102400079_102400195_102400277_102400492_102400654_102400825_102400946_102401050_102401179_102401332_102401448_102401519_102401744_102401918_102402047_102402160_102402254
transcript_27103.known	chr10	+	3015	23	FSM	ENSG00000077150.20	ENST00000661543.1	3015	23	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	11.7849182229094	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGCCCCTGATGTGACT	102395187	True	NA	29	True	AATAAA	-42	NA	102395704	102402524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102395797_102395887_102395981_102396252_102396335_102396448_102396490_102396724_102396824_102396903_102397056_102397301_102397409_102397526_102397686_102397980_102398086_102398211_102398298_102398384_102398524_102398738_102398865_102399287_102399498_102399576_102399719_102400079_102400195_102400277_102400492_102400654_102400825_102400946_102401050_102401179_102401332_102401448_102401519_102401744_102401918_102402047_102402160_102402251
transcript_27104.known	chr10	+	3012	23	FSM	ENSG00000077150.20	ENST00000189444.11	3012	23	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	11.2544756937183	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGCCCCTGATGTGACT	102395187	True	NA	29	True	AATAAA	-42	NA	102395704	102402524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102395797_102395887_102395981_102396252_102396335_102396448_102396490_102396724_102396824_102396903_102397056_102397301_102397409_102397526_102397686_102397980_102398086_102398211_102398298_102398384_102398524_102398738_102398865_102399287_102399498_102399576_102399719_102400079_102400195_102400277_102400492_102400654_102400825_102400946_102401050_102401179_102401332_102401448_102401519_102401744_102401918_102402047_102402160_102402254
transcript_27108.nic	chr10	+	3159	22	ISM	ENSG00000077150.20	ENST00000369966.8	3195	23	1149	0	-41	0	3prime_fragment	FALSE	canonical	3	25	junction_21	11.3287305579408	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGCCCCTGATGTGACT	102395134	True	NA	29	True	AATAAA	-42	NA	102395651	102402524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_102395981_102396252_102396335_102396448_102396490_102396724_102396824_102396903_102397056_102397301_102397409_102397526_102397686_102397980_102398086_102398211_102398298_102398384_102398524_102398738_102398865_102399287_102399498_102399576_102399719_102400079_102400195_102400277_102400492_102400654_102400825_102400946_102401050_102401179_102401332_102401448_102401519_102401744_102401918_102402047_102402160_102402251
transcript_27109.known	chr10	+	3114	22	FSM	ENSG00000077150.20	ENST00000652277.1	3114	22	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	10.6970231305198	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCAGCCCCTGATGTGAC	102395175	True	NA	28	True	AATAAA	-41	NA	102395692	102402523	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102395981_102396252_102396335_102396448_102396490_102396724_102396824_102396903_102397056_102397301_102397409_102397526_102397686_102397980_102398086_102398211_102398298_102398384_102398524_102398738_102398865_102399287_102399498_102399576_102399719_102400079_102400195_102400277_102400492_102400654_102400825_102400946_102401050_102401179_102401332_102401448_102401519_102401744_102401918_102402047_102402160_102402254
transcript_27112.known	chr10	+	1634	12	FSM	ENSG00000077150.20	ENST00000467116.5	1634	12	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	5.83236906630743	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATCTGG	102395188	True	NA	NA	False	NA	NA	NA	102395705	102399218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102395797_102395887_102395981_102396252_102396335_102396448_102396490_102396724_102396824_102396903_102397056_102397301_102397409_102397526_102397686_102397980_102398086_102398211_102398298_102398384_102398524_102398738
transcript_27118.nic	chr10	+	2280	5	NIC	ENSG00000107872.14	novel	1340	4	NA	NA	-12	0	intron_retention	TRUE	canonical	3	89	junction_1	61.8647718819038	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGCCTGGTGCTGCCCTG	102419765	True	NA	29	True	AATAAA	-16	NA	102419801	102423136	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_102420958_102421051_102421183_102421353_102421508_102421786_102422293_102422803
transcript_27121.nic	chr10	+	1525	4	NIC	ENSG00000107872.14	novel	1340	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	89	junction_1	71.0226880807973	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGCCTGGTGCTGCCCTG	102420620	True	NA	29	True	AATAAA	-16	NA	102420835	102423136	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_102420958_102421051_102421183_102421353_102422293_102422803
transcript_27123.known	chr10	+	1340	4	FSM	ENSG00000107872.14	ENST00000369956.8	1340	4	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	53.7959106252511	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGCCTGGTGCTGCCCTG	102420620	True	NA	29	True	AATAAA	-16	NA	102420835	102423136	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102421183_102421353_102421508_102421786_102422293_102422803
transcript_27124.known	chr10	-	1100	9	FSM	ENSG00000107874.11	ENST00000369937.5	1100	9	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_4	45.868698477284	226	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGAGTGCATTCTGGTC	-102423894	True	NA	-11	True	AGTAAA	-15	NA	102432574	102423248	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_102423573_102423656_102423718_102423797_102423860_102423995_102424179_102424263_102424395_102424498_102424561_102424648_102424793_102425114_102425199_102432525
transcript_2713.known	chr1	+	1734	5	FSM	ENSG00000132879.14	ENST00000376762.8	1734	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	59.721750644133	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCCCTGTGGTTTCTG	11653220	True	NA	17	True	AATAAA	-18	NA	11654909	11662291	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11654953_11655805_11656101_11658266_11658365_11658735_11658872_11661129
transcript_27131.known	chr10	+	1483	5	FSM	ENSG00000269609.6	ENST00000663480.1	1483	5	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_3	65.3031392813546	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAACTTGTCTTGTTTT	102449004	True	NA	-19	True	NA	NA	NA	102449869	102456267	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102450023_102450186_102450331_102451398_102451556_102452089_102452188_102455336
transcript_27135.known	chr10	+	1312	3	FSM	ENSG00000269609.6	ENST00000473970.3	1312	3	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	29.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGTGATTTGTTACA	NA	False	NA	11	True	AATAAA	-24	NA	102449815	102456297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102450023_102450186_102450331_102455336
transcript_2716.nic	chr1	+	2057	5	NIC	ENSG00000132879.14	novel	2928	6	NA	NA	-8	0	intron_retention	FALSE	canonical	3	124	junction_3	50.3853897474258	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTGCCCTGTGGTTTC	11654798	True	NA	15	True	AATAAA	-16	NA	11654848	11662289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_11654953_11655805_11656101_11658266_11658629_11658735_11658872_11661129
transcript_27165.known	chr10	-	2830	11	FSM	ENSG00000138107.13	ENST00000369905.9	2830	11	0	0	0	0	multi-exon	FALSE	canonical	3	772	junction_5	38.6735051424098	1195	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCCTCTATCTGTCTG	-102485824	True	NA	-9	True	AATAAA	-22	NA	102502712	102479228	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_102480966_102481131_102481173_102481836_102481899_102482000_102482176_102483010_102483104_102484159_102484377_102485608_102485734_102488149_102488276_102489062_102489139_102490548_102490614_102502599
transcript_27176.known	chr10	+	2852	10	FSM	ENSG00000138111.14	ENST00000238936.8	2852	10	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	37.500946490113	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGCTGTGTGAGTGAG	102459018	True	NA	23	True	ATTAAA	-23	NA	102461394	102477045	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102461451_102465981_102466088_102468954_102469198_102469992_102470076_102470664_102471118_102471272_102471397_102472853_102472951_102473569_102473742_102473818_102474013_102475721
transcript_27191.nnic	chr10	+	2784	9	NIC	ENSG00000138111.14	novel	2852	10	NA	NA	-38	0	combination_of_known_splicesites	TRUE	canonical	3	46	junction_1	32.47691487811	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGCTGTGTGAGTGAG	102458980	True	NA	23	True	ATTAAA	-23	NA	102461356	102477045	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_102461451_102468954_102469198_102469992_102470076_102470664_102471118_102471272_102471397_102472853_102472951_102473569_102473742_102473818_102474013_102475721
transcript_2720.nic	chr1	+	2520	5	NIC	ENSG00000132879.14	novel	822	6	NA	NA	-8	0	intron_retention	FALSE	canonical	3	92	junction_3	63.5152540733326	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTGCCCTGTGGTTTC	11653179	True	NA	15	True	AATAAA	-16	NA	11654868	11662289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_11655700_11655805_11656101_11658266_11658365_11658735_11658872_11661129
transcript_2723.nic	chr1	+	2784	5	NIC	ENSG00000132879.14	novel	3320	7	NA	NA	-8	0	intron_retention	FALSE	canonical	3	109	junction_1	55.553465238453	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTGCCCTGTGGTTTC	11653179	True	NA	15	True	AATAAA	-16	NA	11654868	11662289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_11655700_11655805_11656101_11658266_11658629_11658735_11658872_11661129
transcript_27238.known	chr10	+	5016	12	FSM	ENSG00000107882.12	ENST00000369902.8	5016	12	0	0	0	0	multi-exon	TRUE	canonical	3	42	junction_6	7.73422147460117	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTAGCCACTTAGAAGCC	102503115	True	NA	95	True	NA	NA	NA	102503971	102633535	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102504335_102509168_102509304_102549969_102550107_102592581_102592725_102593635_102593722_102593992_102594066_102597139_102597294_102599432_102599545_102615267_102615403_102617289_102617429_102627174_102627244_102630065
transcript_27240.known	chr10	+	1839	11	FSM	ENSG00000107882.12	ENST00000369899.6	1839	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_10	15.511286213593	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAAGGCCTGTGTTATGG	102503150	True	NA	10	True	AATAAA	-24	NA	102504006	102619462	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102504335_102509168_102509304_102549969_102550107_102592581_102592725_102593635_102593722_102593992_102594066_102597139_102597294_102599432_102599545_102615267_102615403_102617289_102617429_102619065
transcript_27241.known	chr10	+	2130	6	FSM	ENSG00000171206.15	ENST00000643376.1	2130	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	67.9629310727547	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTAGTGAGCACTTT	102644913	True	NA	-99	True	GGGGCT	-40	NA	102645005	102658191	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102645188_102654652_102654749_102655079_102655314_102656105_102656138_102656244_102656386_102656746
transcript_27243.known	chr10	+	2759	6	FSM	ENSG00000171206.15	ENST00000643721.2	2759	6	0	0	0	0	multi-exon	FALSE	canonical	2	99	junction_1	34.5288285350083	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTGCCTCGCCTGTTCC	102644345	True	NA	28	True	AATAAA	-19	NA	102644478	102658318	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102645188_102654652_102654749_102655079_102655314_102656105_102656138_102656269_102656386_102656746
transcript_27245.known	chr10	+	3048	5	FSM	ENSG00000171206.15	ENST00000302424.12	3048	5	0	0	0	0	multi-exon	FALSE	canonical	2	99	junction_1	38.5186643070603	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCTAGAGCACACACCAAA	102644361	False	NA	-28	True	NA	NA	NA	102644494	102658262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102645188_102654652_102654749_102655079_102655314_102656105_102656138_102656269
transcript_27246.known	chr10	+	883	5	FSM	ENSG00000171206.15	ENST00000462202.3	883	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	79.3548202694707	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCCTGCAGCTCCACGCA	102644875	False	NA	NA	False	NA	NA	NA	102644886	102656946	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102645188_102655079_102655314_102656105_102656138_102656269_102656386_102656746
transcript_27248.known	chr10	-	3834	6	FSM	ENSG00000138175.9	ENST00000260746.6	3834	6	0	0	0	0	multi-exon	FALSE	canonical	3	902	junction_5	104.062673423279	346	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCCTGGAATGTGTTGT	-102699532	True	NA	-10	True	AATAAA	-17	NA	102714397	102673730	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_102676942_102685815_102686002_102689892_102689944_102699372_102699490_102705345_102705490_102714272
transcript_2725.nic	chr1	-	2173	5	NIC	ENSG00000116661.11	novel	1287	6	NA	NA	-333	0	intron_retention	FALSE	canonical	3	335	junction_4	25.5147016443461	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAATGAATGAAAAAATGGA	NA	False	NA	-37	True	AATAAA	-19	NA	11654762	11648386	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_11648829_11649086_11649875_11649944_11650075_11650465_11650835_11654318
transcript_27257.nic	chr10	+	2555	13	NIC	ENSG00000156398.13	novel	6770	12	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	21.2125486969912	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAACTGTAAACTAAGTTA	102713411	True	NA	39	True	AATAAA	-33	NA	102714608	102739189	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_102714682_102724935_102724997_102726611_102726798_102726986_102727158_102728430_102728530_102729318_102729395_102729722_102729809_102731722_102731784_102732151_102732219_102732858_102732909_102733553_102733604_102735861_102735910_102737662
transcript_27258.nic	chr10	+	2573	13	NIC	ENSG00000156398.13	novel	6770	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	21.5651467779738	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAACTGTAAACTAAGTTA	102713430	True	NA	39	True	AATAAA	-33	NA	102714627	102739189	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_102714682_102716613_102716712_102726611_102726798_102726986_102727158_102728430_102728530_102729318_102729395_102729722_102729809_102731722_102731784_102732151_102732219_102732858_102732909_102733553_102733604_102735861_102735910_102737662
transcript_27262.known	chr10	+	6770	12	FSM	ENSG00000156398.13	ENST00000369893.10	6770	12	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	7.87190841846882	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTCCTCTTCAGGAGC	102713438	True	NA	NA	False	ATTAAA	-18	NA	102714635	102743492	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102714682_102726611_102726798_102726986_102727158_102728430_102728530_102729318_102729395_102729722_102729809_102731722_102731784_102732151_102732219_102732858_102732909_102733553_102733604_102735861_102735910_102737662
transcript_27271.known	chr10	+	667	5	FSM	ENSG00000156398.13	ENST00000602660.1	667	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	11.4127122105133	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCCGGCTGGCCAAGTGA	102713461	True	NA	NA	False	NA	NA	NA	102714658	102729506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102714682_102726611_102726798_102726986_102727158_102728430_102728530_102729318
transcript_27273.nnic	chr10	+	2677	5	NNC	ENSG00000166272.18	novel	4129	4	NA	NA	3	-1378	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	35.2349258548957	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATATATATATGTCCAAA	102742048	True	NA	NA	False	AAGAAA	-18	NA	102743950	102814884	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_102744026_102744096_102744144_102797992_102798096_102809892_102810055_102812594
transcript_27274.nnic	chr10	+	4055	5	NNC	ENSG00000166272.18	novel	4129	4	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	35.2349258548957	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTACTGCTCTTTCTTGCT	102742048	True	NA	14	True	AATAAA	-16	NA	102743950	102816262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_102744026_102744096_102744144_102797992_102798096_102809892_102810055_102812594
transcript_27276.known	chr10	+	4129	4	FSM	ENSG00000166272.18	ENST00000448841.7	4129	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	12.657891697365	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTACTGCTCTTTCTTGCT	102742045	True	NA	14	True	AATAAA	-16	NA	102743947	102816262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102744144_102797992_102798096_102809892_102810055_102812594
transcript_27278.known	chr10	+	4107	4	FSM	ENSG00000166272.18	ENST00000369889.5	4107	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	30.0037034751082	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTCTTTCTTGCTGCACT	102776234	True	NA	19	True	AATAAA	-21	NA	102776248	102816267	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102776418_102797992_102798096_102809892_102810055_102812594
transcript_27279.known	chr10	+	15857	8	FSM	ENSG00000148842.18	ENST00000369878.9	15857	8	0	0	0	0	multi-exon	TRUE	canonical	2	15	junction_6	18.1186565254081	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCTTTTTCTTGAGAT	102917354	True	NA	11	True	AATAAA	-16	NA	102918293	103090222	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102920102_103049706_103049851_103054328_103054467_103056794_103056965_103068628_103068723_103071773_103071840_103076085_103076271_103076970
transcript_27281.known	chr10	+	3857	7	FSM	ENSG00000148842.18	ENST00000433628.2	3857	7	0	0	0	0	multi-exon	TRUE	canonical	2	39	junction_5	8.5374989832438	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGGGCCCGGCAGTGGC	102917417	False	NA	NA	False	NA	NA	NA	102918356	103078351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102920102_103049706_103049851_103054328_103054467_103056794_103056965_103068628_103068723_103076085_103076271_103076970
transcript_27288.known	chr10	+	2059	2	FSM	ENSG00000148842.18	ENST00000369875.3	2059	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGCGTGGTGGTGGGTG	102917377	True	NA	9	True	AATAAA	-16	NA	102918316	102927618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102920102_102927344
transcript_27289.known	chr10	+	1723	13	NNC	ENSG00000214435.9	novel	2450	11	NA	NA	46	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	22.596091107387	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAACATCTTTGAATCAAG	102867713	True	NA	6	True	AATAAA	-16	NA	102869515	102901894	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_102869594_102869804_102869846_102870083_102870212_102872447_102872599_102873096_102873234_102874591_102874662_102876953_102877036_102878378_102878511_102878848_102878992_102890543_102890655_102890655_102890679_102900592_102900800_102901474
transcript_27292.known	chr10	+	2450	11	FSM	ENSG00000214435.9	ENST00000369880.8	2450	11	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_9	9.68297474952816	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTTTGAATCAAGTATCT	102867667	True	NA	11	True	AATAAA	-21	NA	102869469	102901899	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102869594_102869804_102869846_102870083_102870212_102872447_102872599_102873096_102873234_102874591_102874662_102876953_102877036_102878378_102878511_102878848_102878992_102890543_102890679_102900592
transcript_27295.known	chr10	+	838	6	FSM	ENSG00000166275.16	ENST00000369883.3	838	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	19.3142434488126	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTCATATTGTTATTG	102853650	True	NA	NA	False	AATAAA	-23	NA	102854261	102864213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102854428_102860331_102860395_102860497_102860542_102862159_102862181_102862872_102862933_102863729
transcript_27296.known	chr10	+	2386	5	FSM	ENSG00000166275.16	ENST00000339834.10	2386	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	2.34520787991171	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTAGGGATAGAGTGGAA	102853647	True	NA	NA	False	AAGAAA	-22	NA	102854258	102864961	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_102854428_102860331_102860395_102860497_102860542_102862159_102862181_102862872
transcript_27302.known	chr10	-	3360	21	FSM	ENSG00000076685.19	ENST00000675811.1	3360	21	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_9	123.14560487488	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTCAATAAAGTGTAATAT	-103185660	True	NA	-41	True	NA	NA	NA	103193268	103088180	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_103089909_103090610_103090788_103090935_103090997_103091563_103091616_103093138_103093310_103093971_103094039_103094347_103094456_103095938_103095981_103097290_103097375_103098047_103098089_103098930_103098985_103099925_103100020_103101044_103101103_103101234_103101327_103105357_103105382_103105705_103105802_103106588_103106707_103111744_103111806_103139405_103139480_103174857_103174983_103193235
transcript_27306.nnic	chr10	-	3546	20	NNC	ENSG00000076685.19	novel	3614	21	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_13	96.6343308861668	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGTTCTAACATGATTAT	-103185707	True	NA	-32	True	AATAAA	-15	NA	103193315	103088037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_103089909_103090610_103090788_103090935_103090997_103091563_103091616_103093138_103093310_103093971_103094039_103094347_103094456_103095938_103095981_103097290_103097375_103098930_103098985_103099925_103100020_103101044_103101103_103101234_103101327_103105357_103105382_103105705_103105802_103106588_103106707_103139405_103139480_103174857_103174983_103181230_103181329_103193235
transcript_2731.known	chr1	+	1444	6	FSM	ENSG00000116663.11	ENST00000376753.9	1444	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	2.48193472919817	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCCTGGGGTTGGTTTTA	11664104	True	NA	NA	False	AATAAA	-30	NA	11664199	11674354	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11664256_11668655_11668945_11671265_11671393_11671927_11672024_11673276_11673413_11673614
transcript_27313.nic	chr10	-	3405	19	NIC	ENSG00000076685.19	novel	3525	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_13	85.4249544308112	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGTTCTAACATGATTAT	-103185664	True	NA	-32	True	AATAAA	-15	NA	103193272	103088037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_103089909_103090610_103090788_103090935_103090997_103091563_103091616_103093138_103093310_103093971_103094039_103094347_103094456_103095938_103095981_103097290_103097375_103098930_103098985_103099925_103100020_103101044_103101103_103101234_103101327_103105357_103105382_103105705_103105802_103106588_103106707_103139405_103139480_103174857_103174983_103193235
transcript_27315.known	chr10	-	3525	19	FSM	ENSG00000076685.19	ENST00000404739.8	3525	19	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_17	76.4417998573562	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGTTCTAACATGATTAT	-103185664	True	NA	-32	True	AATAAA	-15	NA	103193272	103088037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_103089909_103090610_103090788_103090935_103090997_103091563_103091616_103093138_103093310_103093971_103094039_103094347_103094456_103095938_103095981_103097290_103097375_103098930_103098985_103099925_103100020_103101044_103101103_103101234_103101327_103105705_103105802_103106588_103106707_103139405_103139480_103174857_103174983_103181184_103181329_103193235
transcript_27319.nic	chr10	-	3333	19	NIC	ENSG00000076685.19	novel	3614	21	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_13	85.4249544308112	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTAACGGTGACTTTG	-103185718	True	NA	-24	True	AATAAA	-7	NA	103193326	103088163	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_103089909_103090610_103090788_103090935_103090997_103091563_103091616_103093138_103093310_103093971_103094039_103094347_103094456_103095938_103095981_103097290_103097375_103098930_103098985_103099925_103100020_103101044_103101103_103101234_103101327_103105357_103105382_103105705_103105802_103106588_103106707_103139405_103139480_103174857_103174983_103193235
transcript_27322.nnic	chr10	-	3396	19	NNC	ENSG00000076685.19	novel	3192	20	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_18	71.4727997990222	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTAACGGTGACTTTG	-103185707	True	NA	-24	True	AATAAA	-7	NA	103193315	103088163	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_103089909_103090610_103090788_103090935_103090997_103091563_103091616_103093138_103093310_103093971_103094039_103094347_103094456_103095938_103095981_103097290_103097375_103098930_103098985_103099925_103100020_103101044_103101103_103101234_103101327_103105705_103105802_103106588_103106707_103139405_103139480_103174857_103174983_103181230_103181329_103193235
transcript_27328.known	chr10	-	3435	18	FSM	ENSG00000076685.19	ENST00000343289.9	3435	18	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_17	44.8160407516161	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATGGTGTTACATAGGC	-103185698	True	NA	-12	True	AATAAA	-35	NA	103193306	103088017	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_103089909_103090610_103090788_103090935_103090997_103091563_103091616_103093138_103093310_103093971_103094039_103094347_103094456_103095938_103095981_103097290_103097375_103098930_103098985_103099925_103100020_103101044_103101103_103101234_103101327_103105705_103105802_103106588_103106707_103139405_103139480_103174857_103174983_103193235
transcript_27342.known	chr10	+	3251	3	FSM	ENSG00000148798.11	ENST00000369849.9	3251	3	0	0	0	0	multi-exon	TRUE	canonical	3	71	junction_2	4	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAATTCGTGTTCTGTGGT	103275347	True	NA	13	True	AATAAA	-26	NA	103277137	103290346	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_103278277_103287034_103287160_103288359
transcript_27345.known	chr10	-	2236	10	FSM	ENSG00000156374.16	ENST00000369847.4	2236	10	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_3	15.9358281016065	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGAATGTTAGTGTTTA	-103348232	True	NA	-2	True	AATAAA	-17	NA	103351140	103302795	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_103303962_103314185_103314273_103326533_103326633_103333924_103333953_103345023_103345133_103347237_103347298_103347394_103347451_103348715_103348813_103348899_103349000_103350706
transcript_27349.known	chr10	-	1950	7	FSM	ENSG00000156374.16	ENST00000337211.8	1950	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	52.0245668464001	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGAATGTTAGTGTTTA	-103348171	True	NA	-2	True	AATAAA	-17	NA	103351079	103302795	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_103303962_103314185_103314273_103326533_103326633_103333924_103333953_103348715_103348813_103348899_103349000_103350706
transcript_27352.known	chr10	+	3259	11	FSM	ENSG00000148835.12	ENST00000369839.4	3259	11	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_8	9.61041102138717	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTGTACAAATTGAATT	103366527	True	NA	15	True	AATAAA	-27	NA	103367975	103389065	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_103368549_103373357_103373596_103378234_103378551_103379607_103379772_103379883_103380020_103381720_103381842_103383237_103383368_103385325_103385491_103387174_103387353_103387520_103387699_103388005
transcript_27358.known	chr10	-	882	6	FSM	ENSG00000173915.16	ENST00000369825.6	882	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	2984.60393352284	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTATTTACAAGATATCAA	-103360144	True	NA	8	True	AATAAA	-26	NA	103396492	103389040	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_103389167_103392190_103392284_103392370_103392467_103394198_103394395_103395745_103396033_103396408
transcript_27359.known	chr10	-	560	5	FSM	ENSG00000173915.16	ENST00000337003.4	560	5	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_4	3057.57007278656	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCTTTATTTACA	-103360118	True	NA	-1	True	AATAAA	-17	NA	103396466	103389049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_103389167_103392190_103392284_103392370_103392467_103394198_103394395_103396408
transcript_27361.known	chr10	-	660	5	FSM	ENSG00000173915.16	ENST00000369815.6	660	5	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_4	2940.53677072741	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCTTTATTTACA	-103360127	True	NA	-1	True	AATAAA	-17	NA	103396475	103389049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_103389167_103392190_103392284_103392370_103392467_103395745_103396033_103396408
transcript_27362.nic	chr10	+	1242	4	ISM	ENSG00000148835.12	ENST00000690667.1	1827	7	-37	5919	-13	1156	5prime_fragment	FALSE	canonical	3	162	junction_3	12.2836838484589	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGCCTAAAAAAGATA	103366504	True	NA	40	True	AATGAA	-18	NA	103367952	103379699	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_103368549_103373357_103373596_103378234_103378551_103379607
transcript_27364.known	chr10	-	364	4	FSM	ENSG00000173915.16	ENST00000309579.7	364	4	0	0	0	0	multi-exon	FALSE	canonical	3	5118	junction_3	577.987504670781	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCTTTATTTACA	-103360118	True	NA	-1	True	AATAAA	-17	NA	103396466	103389049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_103389167_103392190_103392284_103392370_103392467_103396408
transcript_27369.known	chr10	+	6467	36	FSM	ENSG00000148843.15	ENST00000649849.1	6467	36	0	0	0	0	multi-exon	TRUE	canonical	3	67	junction_31	56.6742932042746	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTGGCAGAGCTTTAA	103389272	True	NA	3	True	ATTAAA	-4	NA	103396625	103446281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_103396731_103398415_103398529_103400396_103400529_103403117_103403286_103405021_103405184_103405984_103406109_103406608_103406791_103409698_103409807_103413115_103413323_103413965_103414091_103414269_103414331_103415004_103415152_103416490_103416743_103417791_103417933_103418439_103418635_103419537_103419709_103421347_103421568_103422987_103423138_103423542_103423659_103424983_103425526_103427328_103427392_103432128_103432235_103433947_103434038_103434247_103434351_103434797_103434976_103438014_103438072_103438685_103438809_103439745_103439869_103440289_103440582_103440733_103440851_103441825_103441976_103442209_103442461_103443164_103443334_103443914_103444069_103444516_103444683_103445377
transcript_2737.known	chr1	-	1002	9	FSM	ENSG00000116670.15	ENST00000376672.5	1002	9	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_4	1140.69657994578	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTGTGAGTTGTTTCAAT	-11691465	False	NA	-1	True	NA	NA	NA	11691477	11674524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_11674817_11675081_11675175_11675657_11675732_11676045_11676141_11676808_11676949_11677542_11677615_11680352_11680472_11680561_11680614_11691412
transcript_27370.known	chr10	-	1843	4	FSM	ENSG00000138172.11	ENST00000369788.7	1843	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2.16024689946929	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCCTGGTGTCTGTGTGA	-103452287	True	NA	NA	False	GATAAA	-20	NA	103452402	103446785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_103447569_103449386_103450100_103451082_103451183_103452155
transcript_27372.known	chr10	+	657	2	FSM	ENSG00000234699.1	ENST00000411906.1	657	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTTACTGTGGCCCA	103452817	False	NA	NA	False	AATAAA	-19	NA	103452845	103462695	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_103453237_103462429
transcript_27373.known	chr10	-	3212	2	FSM	ENSG00000185933.7	ENST00000329905.6	3212	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTTTCTTTCCTTCGTA	-103458875	True	NA	NA	False	AATAAA	-15	NA	103458900	103453239	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_103455748_103458196
transcript_27375.known	chr10	+	4314	6	FSM	ENSG00000107954.11	ENST00000369780.9	4582	6	274	-6	274	6	multi-exon	FALSE	canonical	0	0	junction_1	3.32264954516723	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCGGTGCTGTGCGCAGAG	103493963	False	NA	NA	False	AATAAA	-22	NA	103493978	103592552	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_103494473_103570871_103571114_103571500_103571823_103584535_103585226_103589513_103589661_103590133
transcript_27384.nic	chr10	-	5089	8	ISM	ENSG00000107957.17	ENST00000420222.2	3039	9	-45	-1483	-45	0	intron_retention	FALSE	canonical	3	8	junction_6	3.85449644663773	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGGTTGTGTTTTTCA	-103661039	True	NA	-5	True	AATAAA	-23	NA	103661749	103600291	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_103603790_103605797_103605918_103611580_103611631_103612852_103613191_103617196_103617315_103622469_103622554_103627088_103627203_103660982
transcript_27385.nic	chr10	-	3635	8	ISM	ENSG00000107957.17	ENST00000420222.2	3039	9	-45	-29	-45	29	intron_retention	FALSE	canonical	3	8	junction_6	3.85449644663773	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGGGAAAGGAAAAAATG	-103661039	True	NA	NA	False	NA	NA	NA	103661749	103601745	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_103603790_103605797_103605918_103611580_103611631_103612852_103613191_103617196_103617315_103622469_103622554_103627088_103627203_103660982
transcript_27386.nic	chr10	-	3558	8	ISM	ENSG00000107957.17	ENST00000420222.2	3039	9	-45	48	-45	-48	intron_retention	FALSE	canonical	3	8	junction_6	3.85449644663773	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTAGCAGAGGGCCTGGG	-103661039	True	NA	NA	False	NA	NA	NA	103661749	103601822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_103603790_103605797_103605918_103611580_103611631_103612852_103613191_103617196_103617315_103622469_103622554_103627088_103627203_103660982
transcript_27391.known	chr10	-	1414	11	FSM	ENSG00000107960.11	ENST00000466828.5	1414	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	66.7997005981314	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATCTTGGGAATGGGATT	-103915982	True	NA	-11	True	AATAAA	-13	NA	103918130	103882554	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_103882842_103889071_103889145_103892129_103892253_103897547_103897720_103898292_103898378_103898876_103899001_103900061_103900224_103905090_103905157_103910526_103910623_103917461_103917657_103918099
transcript_27394.known	chr10	-	6369	10	FSM	ENSG00000107960.11	ENST00000224950.8	6369	10	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_9	24.2766971536772	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAGCAAAAGGTTCTGTG	-103916036	True	NA	-7	True	AATAAA	-20	NA	103918184	103877568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_103882842_103889071_103889145_103892129_103892253_103897547_103897720_103898876_103899001_103900061_103900224_103905090_103905157_103910526_103910623_103917461_103917657_103918099
transcript_27401.nic	chr10	-	2801	25	NIC	ENSG00000065618.21	novel	5612	56	NA	NA	9844	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	3.08192535420456	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATGTTTAATGTGATTC	-104046055	True	NA	NA	False	ATTAAA	-18	NA	104046125	104031287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_104031594_104032203_104032291_104032673_104032755_104032905_104032969_104033237_104033376_104033944_104034335_104034620_104034768_104035262_104035374_104035473_104035564_104036491_104036633_104037044_104037114_104037635_104037774_104038405_104038529_104039070_104039122_104039444_104039520_104039607_104039641_104039972_104040000_104040350_104040411_104041064_104041119_104041302_104041345_104041484_104041539_104042419_104042456_104043500_104043582_104043824_104043861_104045757
transcript_27404.known	chr10	+	1503	4	FSM	ENSG00000156384.15	ENST00000369729.7	1503	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	62.5264388523411	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCCCTGTCTCTTCAAA	104122013	False	NA	11	True	ATTAAA	-21	NA	104122057	104126385	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_104122155_104122964_104123087_104123713_104124125_104125512
transcript_27405.known	chr10	+	1430	4	FSM	ENSG00000156384.15	ENST00000369727.4	1430	4	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	34.7658836600865	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTTCCCTGTCTCTTCA	104121098	True	NA	9	True	ATTAAA	-19	NA	104122170	104126383	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_104122197_104122964_104123087_104123713_104124125_104125512
transcript_27412.known	chr10	+	1052	6	FSM	ENSG00000148834.13	ENST00000539281.5	1052	6	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	423.71811384457	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATAGCATGCTTTTATT	104253255	True	NA	32	True	AATAAA	-32	NA	104254193	104267459	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_104254500_104255162_104255272_104259575_104259799_104262978_104263078_104266083_104266191_104267251
transcript_27414.known	chr10	+	813	6	FSM	ENSG00000148834.13	ENST00000369713.10	813	6	0	0	0	0	multi-exon	FALSE	canonical	3	917	junction_1	105.281717311222	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAATAATAGCATGCTTT	104244589	True	NA	28	True	AATAAA	-28	NA	104254891	104267455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_104254963_104255162_104255272_104259575_104259799_104262978_104263078_104266083_104266191_104267251
transcript_27415.known	chr10	+	900	5	FSM	ENSG00000148834.13	ENST00000369710.8	900	5	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	459.908143002491	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATAGCATGCTTTTATT	104254677	False	NA	32	True	AATAAA	-32	NA	104254709	104267459	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_104254963_104255162_104255272_104259575_104259799_104266083_104266191_104267251
transcript_27418.known	chr10	+	6715	7	FSM	ENSG00000065621.15	ENST00000338595.7	6715	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	46.5856439498503	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGAATCTCGCTACTCTG	104269096	True	NA	28	True	AATAAA	-28	NA	104269183	104304950	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_104269270_104274684_104274950_104275225_104275335_104277893_104278117_104279369_104279472_104297577_104297685_104299127
transcript_27419.nic	chr10	+	780	5	NIC	ENSG00000065621.15	novel	6715	7	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	38.1903129078566	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTCTTCTGATAATCAT	104274375	True	NA	14	True	AATAAA	-15	NA	104274888	104299414	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_104274950_104277893_104278117_104279369_104279472_104297577_104297685_104299127
transcript_2742.known	chr1	-	872	9	FSM	ENSG00000116670.15	ENST00000376667.7	872	9	0	0	0	0	multi-exon	FALSE	canonical	3	1064	junction_8	758.718450744411	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACTGTCAGACTTTGGGG	-11691597	False	NA	NA	False	CATAAA	-37	NA	11691609	11674747	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_11674817_11675081_11675175_11675657_11675732_11676045_11676141_11676847_11676949_11677542_11677615_11680352_11680472_11680561_11680614_11691412
transcript_27420.known	chr10	+	6423	5	FSM	ENSG00000065621.15	ENST00000369707.2	6423	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	21.9829479369806	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATACTCAGAATCTCGCTA	104274968	True	NA	23	True	AATAAA	-23	NA	104275161	104304945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_104275335_104277893_104278117_104279369_104279472_104297577_104297685_104299127
transcript_27425.known	chr10	-	6585	2	FSM	ENSG00000148841.17	ENST00000337478.3	6585	2	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATTCTTCTTGGTTATCT	-104336834	True	NA	NA	False	CATAAA	-15	NA	104338465	104309699	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_104316065_104338245
transcript_27427.known	chr10	-	3981	2	FSM	ENSG00000148841.17	ENST00000358187.2	3981	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGAGTAGAAATGGTCAC	-104328877	False	1631	-16	True	ATTAAA	-18	NA	104328924	104312143	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_104316065_104328864
transcript_27429.known	chr10	-	6862	26	FSM	ENSG00000108018.16	ENST00000612154.4	6862	26	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	3.14960314960472	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTAGTCCAAACTGGT	NA	False	NA	NA	False	ATTAAA	-13	NA	106956583	106573670	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_106577556_106579090_106579252_106579368_106579475_106597350_106597451_106607165_106607298_106611910_106612024_106618148_106618273_106620427_106620562_106629201_106629389_106652381_106652554_106667688_106667803_106671236_106671368_106672867_106672986_106675048_106675157_106677312_106677405_106679255_106679333_106679631_106679735_106688191_106688339_106699213_106699394_106706544_106706635_106709222_106709342_106730049_106730115_106761587_106761662_106776533_106776693_106829573_106829674_106956512
transcript_2743.nnic	chr1	-	1070	9	NNC	ENSG00000116670.15	novel	1053	9	NA	NA	-228	0	at_least_one_novel_splicesite	FALSE	canonical	3	862	junction_8	824.264672298892	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGCCATCATTAACTGG	-11691866	False	NA	-20	True	AATAAA	-23	NA	11691878	11674479	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_11674817_11675081_11675175_11675657_11675732_11676045_11676141_11676847_11676949_11677542_11677615_11680352_11680472_11680561_11680614_11691751
transcript_27455.known	chr10	-	2497	21	FSM	ENSG00000108039.18	ENST00000502935.6	2497	21	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_13	34.8519726844837	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTAGCTGTCTCTT	-109920396	True	NA	-6	True	AATAAA	-16	NA	109923511	109864765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_109865313_109868613_109868713_109869952_109870030_109870730_109870905_109871791_109871862_109873366_109873428_109875527_109875600_109877789_109877868_109877999_109878059_109880187_109880239_109880841_109880932_109882431_109882643_109884066_109884149_109886245_109886342_109888048_109888193_109888502_109888596_109891721_109891827_109893011_109893076_109907690_109907816_109915010_109915100_109923401
transcript_27463.nic	chr10	-	2468	20	NIC	ENSG00000108039.18	novel	2497	21	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	2	22	junction_19	69.1560121509367	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTAGCTGTCTCTT	-109920456	True	NA	-6	True	AATAAA	-16	NA	109923571	109864765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_109865313_109868613_109868713_109869952_109870030_109870730_109870905_109871791_109871862_109873366_109873428_109875527_109875600_109877789_109877868_109877999_109878059_109880187_109880239_109880841_109880932_109882431_109882643_109884066_109884149_109886245_109886342_109888048_109888193_109888502_109888596_109891721_109891827_109893011_109893076_109907690_109907816_109923401
transcript_27474.known	chr10	-	2467	20	FSM	ENSG00000108039.18	ENST00000322238.12	2467	20	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_6	67.930182505944	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTAGCTGTCTCTT	-109920438	True	NA	-6	True	AATAAA	-16	NA	109923553	109864765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_109865313_109868613_109868713_109869952_109870030_109870730_109870905_109871791_109871862_109873366_109873428_109877789_109877868_109877999_109878059_109880187_109880239_109880841_109880932_109882431_109882643_109884066_109884149_109886245_109886342_109888048_109888193_109888502_109888596_109891721_109891827_109893011_109893076_109907690_109907816_109915010_109915100_109923401
transcript_27483.known	chr10	-	2344	19	FSM	ENSG00000108039.18	ENST00000369683.5	2344	19	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_17	93.0950828156055	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTAGCTGTCTCTT	-109920396	True	NA	-6	True	AATAAA	-16	NA	109923511	109864765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_109865313_109868613_109868713_109869952_109870030_109870730_109870905_109871791_109871862_109873366_109873428_109875527_109875600_109877789_109877868_109877999_109878059_109880187_109880239_109880841_109880932_109882431_109882643_109884066_109884149_109886245_109886342_109888048_109888193_109888502_109888596_109891721_109891827_109907690_109907816_109923401
transcript_27516.known	chr10	+	4413	15	FSM	ENSG00000148700.15	ENST00000356080.9	4413	15	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_5	51.295661590033	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGACTTGTATCATGAGGTT	110003584	True	NA	NA	False	AATAAA	-17	NA	110007983	110135565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_110008300_110100624_110100849_110112776_110112916_110116258_110116411_110117341_110117423_110118586_110118737_110119210_110119355_110119465_110119565_110122109_110122293_110124016_110124275_110125825_110125946_110126416_110126504_110130362_110130487_110132304_110132401_110133325
transcript_27523.nic	chr10	+	2214	14	ISM	ENSG00000148700.15	ENST00000356080.9	4413	15	-48	3172	-28	-334	5prime_fragment	FALSE	canonical	3	339	junction_5	52.720767160018	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGAAGGTACTCAATGTAA	110007573	False	NA	18	True	NA	NA	NA	110007935	110132393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_110008300_110100624_110100849_110112776_110112916_110116258_110116411_110117341_110117423_110118586_110118737_110119210_110119355_110119465_110119565_110122109_110122293_110124016_110124275_110125825_110125946_110126416_110126504_110130362_110130487_110132304
transcript_27524.known	chr10	+	4337	14	FSM	ENSG00000148700.15	ENST00000277900.12	4337	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	124.486733211062	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGACTTGTATCATGAGGTT	110007738	False	NA	NA	False	AATAAA	-17	NA	110007963	110135565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_110008300_110100624_110100849_110112776_110112916_110116258_110116411_110117341_110117423_110118586_110118737_110119210_110119355_110119465_110119565_110122109_110122293_110124016_110124275_110125825_110125946_110126416_110126504_110130362_110130487_110133325
transcript_27545.known	chr10	+	3470	6	FSM	ENSG00000119950.21	ENST00000332674.9	3470	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	34.9365138501253	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTTCTTTTTGTACCAT	110206841	True	NA	7	True	AATAAA	-17	NA	110207604	110287365	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_110208083_110228188_110228322_110244827_110244858_110279179_110279295_110279913_110280086_110284823
transcript_27548.known	chr10	+	782	6	FSM	ENSG00000119950.21	ENST00000460667.5	782	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	47.7660967632902	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCATCAGTGACATTGATG	110225766	False	NA	NA	False	AATATA	-9	NA	110226034	110284890	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_110226284_110228188_110228322_110244827_110244874_110279179_110279295_110279913_110280086_110284823
transcript_27551.known	chr10	+	2255	6	FSM	ENSG00000119950.21	ENST00000650843.1	2255	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	43.2231419496547	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGGAAAAAGAAAATAAAGAC	110227004	True	NA	-21	True	NA	NA	NA	110227086	110286596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_110227119_110228188_110228322_110244827_110244858_110279179_110279295_110279913_110280086_110284823
transcript_27555.known	chr10	+	996	6	FSM	ENSG00000119950.21	ENST00000650952.1	996	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	47.4358514206291	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTAGACACATTTAAGGAT	110227228	True	NA	NA	False	NA	NA	NA	110227345	110285337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_110227378_110228188_110228322_110244827_110244858_110279179_110279295_110279913_110280086_110284823
transcript_27559.known	chr10	+	567	6	FSM	ENSG00000119950.21	ENST00000651557.1	567	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	55.6035970059492	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTCTCCCATGGAGAAG	110227208	True	NA	NA	False	NA	NA	NA	110227325	110284851	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_110227399_110228188_110228322_110244827_110244874_110279179_110279295_110279913_110280086_110284823
transcript_2756.known	chr1	-	1053	9	FSM	ENSG00000116670.15	ENST00000376692.9	1053	9	0	0	0	0	multi-exon	FALSE	canonical	3	1115	junction_8	742.205149790137	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGCCATCATTAACTGG	-11669716	True	NA	-20	True	AATAAA	-23	NA	11681148	11674479	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_11674817_11675081_11675175_11675657_11675732_11676045_11676141_11676847_11676949_11677542_11677615_11680352_11680472_11680561_11680614_11681038
transcript_27563.nic	chr10	-	2269	7	NIC	ENSG00000119953.14	novel	4310	6	NA	NA	-63	1020	combination_of_known_junctions	FALSE	canonical	3	8	junction_4	78.7543649583945	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGTGTGTTAACAAAAGG	NA	False	NA	NA	False	AATAAA	-17	NA	110305001	110293041	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_110294288_110295227_110295382_110297566_110297729_110298647_110298791_110300546_110300737_110303467_110303588_110304747
transcript_27565.known	chr10	-	1110	6	FSM	ENSG00000119953.14	ENST00000369592.1	1110	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	67.9970587599199	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTAAGCAAGATACCATT	-110296576	False	NA	NA	False	NA	NA	NA	110304697	110294061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_110294288_110295227_110295382_110297566_110297729_110298647_110298791_110303467_110303588_110304392
transcript_27566.known	chr10	-	4310	6	FSM	ENSG00000119953.14	ENST00000369603.10	4310	6	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_4	21.5925913220252	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTGATTCAATAAATATCA	-110296799	True	NA	NA	False	ATTAAA	-28	NA	110304920	110290729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_110294288_110295227_110295382_110297566_110297729_110298647_110298791_110303467_110303588_110304747
transcript_27571.known	chr10	-	753	5	FSM	ENSG00000119953.14	ENST00000460483.5	753	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	68.6931583201704	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTGGTAAATCTTTTTAC	-110296785	True	NA	NA	False	AAAAAG	-4	NA	110304906	110295229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_110295382_110297566_110297746_110298647_110298791_110303467_110303588_110304747
transcript_27572.nic	chr10	-	676	4	ISM	ENSG00000119953.14	ENST00000369603.10	4310	6	-81	6840	-63	0	5prime_fragment	FALSE	canonical	3	127	junction_2	16.779617264871	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAAGTGACTTTGACTT	NA	False	NA	NA	False	NA	NA	NA	110305001	110297569	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_110297729_110298647_110298791_110303467_110303588_110304747
transcript_27574.nnic	chr10	+	2403	5	NNC	ENSG00000138166.6	novel	2477	4	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	192.349129189607	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAAAAGCACTTCTTCAT	110494244	True	NA	9	True	AATAAA	-11	NA	110497900	110511533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_110497997_110498076_110498501_110502720_110502870_110506934_110507155_110510019
transcript_27575.known	chr10	+	2477	4	FSM	ENSG00000138166.6	ENST00000369583.4	2477	4	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_1	20.4015249974658	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAAAAGCACTTCTTCAT	110494250	True	NA	9	True	AATAAA	-11	NA	110497906	110511533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_110498501_110502720_110502870_110506934_110507155_110510019
transcript_27577.known	chr10	+	5522	29	FSM	ENSG00000108055.11	ENST00000361804.5	5522	29	0	0	0	0	multi-exon	FALSE	non_canonical	3	765	junction_19	91.4730569788789	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGTAAAAGCCTATATT	110556882	True	NA	NA	False	AATAAA	-23	NA	110567694	110606048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_110567832_110568937_110569014_110573706_110573746_110575335_110575404_110577420_110577493_110577834_110577915_110578627_110578707_110580903_110581022_110581922_110582099_110582561_110582643_110583383_110583549_110583840_110583963_110584182_110584397_110589604_110589709_110589891_110589992_110590411_110590573_110590990_110591133_110593072_110593224_110596397_110596551_110598138_110598291_110599653_110599813_110600438_110600547_110601021_110601131_110601636_110601885_110601965_110602179_110602473_110602666_110602824_110603003_110603183_110603291_110604230
transcript_27584.nic	chr10	+	1540	14	ISM	ENSG00000108055.11	ENST00000691297.1	3012	17	-21	2514	-21	-1401	5prime_fragment	FALSE	canonical	3	868	junction_4	69.9677017626049	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGAACTACAAAGTGAAAG	NA	False	NA	NA	False	AGTAAA	-11	NA	110567662	110589685	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_110567832_110568937_110569014_110573706_110573746_110575335_110575404_110577420_110577493_110577834_110577915_110578627_110578707_110580903_110581022_110581922_110582099_110582561_110582643_110583383_110583549_110583840_110583963_110584182_110584397_110589604
transcript_27586.nic	chr10	+	1325	13	ISM	ENSG00000108055.11	ENST00000691297.1	3012	17	-21	7937	-21	2256	5prime_fragment	FALSE	canonical	3	868	junction_4	63.0070542787781	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGATAAGTGGATTAAAAAG	NA	False	NA	NA	False	AAGAAA	-1	NA	110567662	110584262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_110567832_110568937_110569014_110573706_110573746_110575335_110575404_110577420_110577493_110577834_110577915_110578627_110578707_110580903_110581022_110581922_110582099_110582561_110582643_110583383_110583549_110583840_110583963_110584182
transcript_27587.nic	chr10	+	1443	13	ISM	ENSG00000108055.11	ENST00000691297.1	3012	17	-21	7819	-21	2374	5prime_fragment	FALSE	canonical	3	868	junction_4	63.0070542787781	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGGAGCAGTATAATGTAA	NA	False	NA	NA	False	AATAAA	-9	NA	110567662	110584380	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_110567832_110568937_110569014_110573706_110573746_110575335_110575404_110577420_110577493_110577834_110577915_110578627_110578707_110580903_110581022_110581922_110582099_110582561_110582643_110583383_110583549_110583840_110583963_110584182
transcript_27588.nic	chr10	+	1219	12	ISM	ENSG00000108055.11	ENST00000691297.1	3012	17	-21	8263	-21	1930	5prime_fragment	FALSE	canonical	3	868	junction_4	61.7405930198786	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAGAAGAACGAGGAAT	NA	False	NA	19	True	NA	NA	NA	110567662	110583936	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_110567832_110568937_110569014_110573706_110573746_110575335_110575404_110577420_110577493_110577834_110577915_110578627_110578707_110580903_110581022_110581922_110582099_110582561_110582643_110583383_110583549_110583840
transcript_27591.nic	chr10	+	1018	11	ISM	ENSG00000108055.11	ENST00000691297.1	3012	17	-21	8756	-21	1437	5prime_fragment	FALSE	canonical	3	868	junction_4	61.5025202735628	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAGCTTAGTGCTGAAAG	NA	False	NA	39	True	AAGAAA	-3	NA	110567662	110583443	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_110567832_110568937_110569014_110573706_110573746_110575335_110575404_110577420_110577493_110577834_110577915_110578627_110578707_110580903_110581022_110581922_110582099_110582561_110582643_110583383
transcript_27593.nic	chr10	+	958	10	ISM	ENSG00000108055.11	ENST00000691297.1	3012	17	-21	9557	-21	636	5prime_fragment	FALSE	canonical	3	868	junction_4	64.6204493108474	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGATTATAAACAAGGTT	NA	False	NA	NA	False	GATAAA	-7	NA	110567662	110582642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_110567832_110568937_110569014_110573706_110573746_110575335_110575404_110577420_110577493_110577834_110577915_110578627_110578707_110580903_110581022_110581922_110582099_110582561
transcript_27596.nic	chr10	+	785	9	ISM	ENSG00000108055.11	ENST00000691297.1	3012	17	-21	10193	-21	0	5prime_fragment	FALSE	canonical	3	868	junction_4	65.9730058432993	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGTATCAGAAGTGGGAT	NA	False	NA	NA	False	AAGAAA	-13	NA	110567662	110582006	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_110567832_110568937_110569014_110573706_110573746_110575335_110575404_110577420_110577493_110577834_110577915_110578627_110578707_110580903_110581022_110581922
transcript_27597.nic	chr10	+	701	8	ISM	ENSG00000108055.11	ENST00000691297.1	3012	17	-21	11178	-21	-985	5prime_fragment	FALSE	canonical	3	868	junction_4	70.2758413507161	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAATAAATGTGATTCTG	NA	False	NA	41	True	AAGAAA	-25	NA	110567662	110581021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_110567832_110568937_110569014_110573706_110573746_110575335_110575404_110577420_110577493_110577834_110577915_110578627_110578707_110580903
transcript_2760.nnic	chr1	+	2383	8	NNC	ENSG00000162490.7	novel	7365	7	NA	NA	-135	-5244	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18.0158660233537	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATCTGACTCAGTGGGC	11691510	False	NA	NA	False	NA	NA	NA	11691574	11720613	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_11691854_11704797_11704925_11706248_11706710_11709274_11709466_11711850_11711966_11712339_11712430_11715118_11715209_11719583
transcript_27602.known	chr10	+	7293	14	FSM	ENSG00000203867.8	ENST00000369519.4	7293	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.92946507489189	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGAGTGACTCTGTGTC	110644294	True	NA	NA	False	AATAAA	-17	NA	110644335	110839468	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_110644646_110780800_110781885_110783365_110783428_110784340_110784433_110784791_110784890_110797507_110797649_110799786_110799919_110810382_110810463_110812277_110812948_110820071_110820177_110821274_110821936_110823479_110823615_110831060_110831183_110835867
transcript_27603.known	chr10	+	3697	13	FSM	ENSG00000150593.18	ENST00000393104.6	3697	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	54.3438128953058	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAAAAGTTGTATTTAAT	110871771	True	NA	NA	False	AATAAA	-19	NA	110871794	110900005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_110872019_110875965_110876071_110876669_110876754_110881232_110881536_110883002_110883098_110885252_110885367_110887664_110887887_110889532_110889631_110890555_110890671_110894090_110894199_110894411_110894523_110895947_110896088_110898027
transcript_27605.known	chr10	+	3481	12	FSM	ENSG00000150593.18	ENST00000280154.12	3481	12	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_2	17.5983658144398	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAAAGTTGTATTTAATC	110868253	True	NA	NA	False	AATAAA	-20	NA	110871927	110900006	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_110872019_110875965_110876071_110881232_110881536_110883002_110883098_110885252_110885367_110887664_110887887_110889532_110889631_110890555_110890671_110894090_110894199_110894411_110894523_110895947_110896088_110898027
transcript_27608.nic	chr10	+	2290	12	NIC	ENSG00000150593.18	novel	3481	12	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	38.4284243972205	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAACATGTGAAGCAGT	110871765	True	NA	-6	True	AATGAA	-27	NA	110871788	110898718	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_110872019_110875965_110876071_110881274_110881536_110883002_110883098_110885252_110885367_110887664_110887887_110889532_110889631_110890555_110890671_110894090_110894199_110894411_110894523_110895947_110896088_110898027
transcript_2761.known	chr1	+	7365	7	FSM	ENSG00000162490.7	ENST00000294485.6	7365	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	10.0277393043275	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGGTGTCTCTCTTTGT	11690335	True	NA	21	True	AATAAA	-21	NA	11691709	11725857	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11691854_11706248_11706710_11709274_11709466_11711850_11711966_11712339_11712430_11715118_11715209_11719583
transcript_27612.known	chr10	-	1988	5	FSM	ENSG00000214413.9	ENST00000652396.1	1988	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	48.5206141758325	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTAAAAAAATGTACTCCCA	-110917969	True	NA	-50	True	ATTAAA	-11	NA	110919157	110898771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_110900527_110901537_110901613_110908523_110908552_110918120_110918214_110919120
transcript_27613.known	chr10	-	812	5	FSM	ENSG00000214413.9	ENST00000454061.5	812	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	44.5224662389675	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATTGCAAATTAAATTAT	-110918013	True	NA	-32	True	NA	NA	NA	110919201	110900120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_110900527_110901537_110901613_110907679_110907837_110918120_110918214_110919120
transcript_27616.known	chr10	-	2025	4	FSM	ENSG00000214413.9	ENST00000448814.7	2025	4	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	4.10960933531265	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTTTATTTTGGTGTAC	-110917992	True	NA	-8	True	AATAAA	-18	NA	110919180	110898729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_110900527_110901537_110901613_110918120_110918214_110919120
transcript_27621.known	chr10	-	727	3	FSM	ENSG00000214413.9	ENST00000447005.5	727	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	45.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGCATAAAGTGTTTGT	-110918013	True	NA	-66	True	ATTAAA	-24	NA	110919201	110899955	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_110900527_110901537_110901613_110919120
transcript_27624.known	chr10	-	296	2	FSM	ENSG00000214413.9	ENST00000431847.1	296	2	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATTCTGTATCTGATTCT	-110917973	True	NA	NA	False	NA	NA	NA	110919161	110917958	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_110918214_110919120
transcript_27626.known	chr10	-	383	3	FSM	ENSG00000214413.9	ENST00000436562.1	383	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	47.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCCAAGATTGATGAAATT	-110917969	True	NA	-15	True	AATAAA	-29	NA	110919157	110900228	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_110900527_110901537_110901586_110919120
transcript_27627.known	chr10	-	616	5	FSM	ENSG00000214413.9	ENST00000398289.2	616	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	42.9090608147044	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACAAAAATATCCAAGATT	-110917994	True	NA	-24	True	AATAAA	-20	NA	110919182	110900237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_110900527_110901025_110901123_110901537_110901613_110918120_110918214_110919120
transcript_27628.known	chr10	+	3884	9	FSM	ENSG00000108061.13	ENST00000369452.9	3884	9	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_2	18.9039513065391	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTTGTGTGTTTGTGTGG	110915649	True	NA	14	True	TATAAA	-29	NA	110919603	111013665	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_110919658_110964124_110965062_110985627_110985766_111000414_111000546_111004605_111004795_111007530_111007654_111009247_111009386_111009712_111009831_111011609
transcript_27629.nnic	chr10	+	3003	8	FSM	ENSG00000108061.13	ENST00000689997.1	3581	8	-27	605	-27	0	multi-exon	TRUE	canonical	3	18	junction_1	54.3413248995342	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTTGTGTGTTTGTGTGG	110915593	True	NA	14	True	TATAAA	-29	NA	110919547	111013665	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_110919658_110985627_110985766_111000414_111000546_111004605_111004795_111007530_111007654_111009247_111009386_111009712_111009831_111011609
transcript_27630.nic	chr10	+	381	2	FSM	ENSG00000108061.13	ENST00000691151.1	6128	2	-62	5809	-37	-344	multi-exon	FALSE	canonical	3	134	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTCTAAAGAAAAAGATCC	110915583	True	NA	NA	False	AAGAAA	-3	NA	110919537	110964385	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_110919658_110964124
transcript_27631.nic	chr10	+	477	2	FSM	ENSG00000108061.13	ENST00000691151.1	6128	2	-62	5713	-37	-248	multi-exon	FALSE	canonical	3	134	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACCTAAGACCAAAGGGAA	110915583	True	NA	NA	False	AAGAAA	-3	NA	110919537	110964481	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_110919658_110964124
transcript_27632.known	chr10	-	6372	22	FSM	ENSG00000119927.14	ENST00000348367.9	6372	22	0	0	0	0	multi-exon	FALSE	canonical	2	50	junction_14	11.8173936911145	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGATGTGTTTGATTTG	-112182339	True	NA	-1	True	AATAAA	-17	NA	112183765	112149864	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_112153667_112154628_112154688_112155863_112156054_112157248_112157390_112158315_112158394_112159910_112160054_112160603_112160869_112161666_112161738_112163700_112163817_112164524_112164611_112166401_112166516_112168311_112168525_112168852_112168953_112172181_112172319_112172969_112173067_112173698_112173846_112175599_112175714_112177983_112178058_112180472_112180596_112181682_112181814_112182793_112182892_112183692
transcript_27636.known	chr10	+	4174	8	FSM	ENSG00000151532.14	ENST00000393077.3	4174	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_7	12.437599348388	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGTTTATCGCTTTTT	112445063	True	NA	15	True	ATTAAA	-18	NA	112447214	112818744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_112447468_112460523_112460583_112464546_112464658_112527086_112527165_112538245_112538331_112668217_112668289_112668936_112668999_112815289
transcript_27645.known	chr10	+	463	3	FSM	ENSG00000151532.14	ENST00000494728.5	463	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGACAAGTAACAGCTTTC	112445124	True	NA	NA	False	ATTAAA	-25	NA	112447275	112464758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_112447468_112460523_112460583_112464546
transcript_27647.known	chr10	+	2423	3	FSM	ENSG00000151532.14	ENST00000483122.1	2423	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTGAATCTTAACTAAT	112446843	True	NA	8	True	AATAAA	-18	NA	112446997	112450726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_112447468_112448381_112448490_112448881
transcript_27652.nnic	chr10	-	2288	12	NNC	ENSG00000023041.12	novel	2170	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_5	79.674855786679	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTTTTTACTTAAAGCAT	-112443526	True	NA	-13	True	AATAAA	-23	NA	112446956	112430299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112433540_112433617_112434296_112434465_112438335_112438390_112440533_112440696_112442191_112442352_112443514_112443607_112445169_112445651_112446704
transcript_27653.nnic	chr10	-	2310	12	NNC	ENSG00000023041.12	novel	2170	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	83.8459823744142	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTTTTTACTTAAAGCAT	-112443526	True	NA	-13	True	AATAAA	-23	NA	112446956	112430299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112433540_112433639_112434296_112434465_112438335_112438390_112440533_112440696_112442191_112442352_112443514_112443607_112445169_112445651_112446704
transcript_27654.known	chr10	-	2297	12	FSM	ENSG00000023041.12	ENST00000682055.1	2297	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	94.0339309254338	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATCAGTTTTTACTTAA	-112443532	True	NA	-18	True	AATAAA	-18	NA	112446962	112430304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112434296_112434465_112438335_112438390_112440533_112440696_112441728_112441813_112442191_112442352_112443514_112443607_112445169_112445651_112446704
transcript_27658.known	chr10	-	2121	11	FSM	ENSG00000023041.12	ENST00000684173.1	2121	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	75.9276629430934	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATCAGTTTTTACTTAA	-112443532	True	NA	-18	True	AATAAA	-18	NA	112446962	112430304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112434296_112434465_112438335_112438390_112440533_112440696_112442191_112442260_112443514_112443607_112445169_112445651_112446704
transcript_27659.nic	chr10	-	2318	11	NIC	ENSG00000023041.12	novel	2170	11	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_10	72.8587674888891	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTTTTTACTTAAAGCAT	-112443514	True	NA	-13	True	AATAAA	-23	NA	112446944	112430299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112434296_112434465_112438335_112438390_112440533_112440696_112442191_112442352_112443514_112443607_112445169_112445651_112446586
transcript_27660.known	chr10	-	1721	11	FSM	ENSG00000023041.12	ENST00000369404.3	1721	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_9	70.1541873304794	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTACTCTGGTTAAGATGT	-112443471	True	NA	-5	True	ACTAAA	-15	NA	112446901	112430723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112434296_112434465_112438335_112438390_112440533_112440696_112442191_112442352_112443514_112443595_112445169_112445651_112446704
transcript_27661.known	chr10	-	2145	11	FSM	ENSG00000023041.12	ENST00000683895.1	2145	11	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_10	71.3164777593509	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATCAGTTTTTACTTAA	-112443526	True	NA	-18	True	AATAAA	-18	NA	112446956	112430304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112434296_112434465_112438335_112438390_112440533_112440696_112442191_112442352_112443514_112443607_112445169_112445651_112446766
transcript_27664.known	chr10	-	3216	10	FSM	ENSG00000023041.12	ENST00000682182.1	3216	10	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_8	36.5557244170365	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATCAGTTTTTACTTAA	-112443520	True	NA	-18	True	AATAAA	-18	NA	112446950	112430304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112434465_112438335_112438390_112440533_112440696_112442191_112442352_112443514_112443607_112445169_112445651_112446704
transcript_27666.nic	chr10	-	870	2	ISM	ENSG00000023041.12	ENST00000684617.1	3472	9	-15	13661	0	-13561	5prime_fragment	FALSE	canonical	3	232	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTAGGCTCGGAGACTT	-112443526	True	NA	-2	True	NA	NA	NA	112446956	112445032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_112445651_112446704
transcript_27668.nic	chr10	-	775	2	ISM	ENSG00000023041.12	ENST00000684617.1	3472	9	-15	13756	0	-13656	5prime_fragment	FALSE	canonical	3	232	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTTGGTTTTTGCCTTA	-112443526	True	NA	-9	True	AAGAAA	-35	NA	112446956	112445127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_112445651_112446704
transcript_27671.known	chr10	+	2160	15	FSM	ENSG00000148737.17	ENST00000545257.6	2160	15	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_13	64.2844444319026	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATGTAGATGAGAGAAG	112950650	False	NA	NA	False	NA	NA	NA	112950663	113166160	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150982_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113158666_113158718_113159919_113159993_113160618_113160692_113165554
transcript_27673.known	chr10	+	3802	14	FSM	ENSG00000148737.17	ENST00000369397.8	3802	14	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_12	52.3273718636226	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGTCACTTGTTTCTGT	112950438	False	NA	13	True	AATAAA	-25	NA	112950451	113167678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150997_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113158666_113158718_113159919_113159993_113165554
transcript_27677.known	chr10	+	1979	13	FSM	ENSG00000148737.17	ENST00000355717.9	1979	13	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	53.1310617456702	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGCGTCGTGAACCCCG	112950572	False	NA	NA	False	NA	NA	NA	112950585	113165972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113089399_113089541_113141183_113141317_113143922_113144026_113146010_113146098_113150997_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113165554
transcript_27682.known	chr10	+	3953	13	FSM	ENSG00000148737.17	ENST00000536810.5	3953	13	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_12	45.4039737614819	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGTCACTTGTTTCTGT	112938856	True	NA	13	True	AATAAA	-25	NA	112950249	113167678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150997_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113159919_113159993_113165554
transcript_27683.known	chr10	+	1755	13	FSM	ENSG00000148737.17	ENST00000629706.2	1755	13	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_12	59.6091435939152	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGCGTCGTGAACCCCG	112950744	False	NA	NA	False	NA	NA	NA	112950756	113165972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150982_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113160618_113160692_113165554
transcript_27684.nic	chr10	+	2514	12	NIC	ENSG00000148737.17	novel	4025	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_11	28.093409715118	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAAAAAGCAAT	112938853	True	NA	NA	False	ATTAAA	-5	NA	112950246	113166309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150997_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113165554
transcript_27686.nic	chr10	+	3883	12	NIC	ENSG00000148737.17	novel	4025	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_11	28.093409715118	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGTCACTTGTTTCTGT	112938853	True	NA	13	True	AATAAA	-25	NA	112950246	113167678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150997_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113165554
transcript_27688.known	chr10	+	4025	14	FSM	ENSG00000148737.17	ENST00000627217.3	4025	14	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_13	60.2030096163299	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGTCACTTGTTTCTGT	112938853	True	NA	13	True	AATAAA	-25	NA	112950246	113167678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_112950946_112951206_112951274_112951482_112951608_112964555_112964625_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150997_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113160618_113160692_113165554
transcript_27695.nnic	chr10	+	1442	8	ISM	ENSG00000148737.17	ENST00000352065.10	1553	15	-413	14489	0	36	5prime_fragment	FALSE	canonical	3	113	junction_7	20.392075291492	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTGTTGCTGTTTTTCT	112938853	True	NA	10	True	NA	NA	NA	112950246	113151123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150997
transcript_27698.known	chr10	+	2467	7	FSM	ENSG00000165806.21	ENST00000621345.4	2467	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	8.19891591749923	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCAGTTTGCTTTCCTTT	113679052	True	NA	17	True	ATTAAA	-25	NA	113679161	113730907	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_113679350_113697493_113697604_113721031_113721169_113721650_113721780_113725361_113725538_113726304_113726435_113729310
transcript_27699.known	chr10	+	2344	7	FSM	ENSG00000165806.21	ENST00000369318.8	2344	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	3.02305952453618	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTCCAGTTTGCTTTCCT	113679636	True	NA	15	True	ATTAAA	-23	NA	113679911	113730905	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_113679979_113697493_113697604_113721031_113721169_113721650_113721780_113725361_113725538_113726304_113726435_113729310
transcript_2770.known	chr1	+	1055	7	FSM	ENSG00000177674.16	ENST00000376627.6	1055	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	413.255940335069	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGCTTCAGGTCCTGCTC	11726748	True	NA	NA	False	NA	NA	NA	11736152	11750578	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11736236_11744532_11744569_11745802_11745838_11746126_11746224_11747439_11747546_11748414_11748611_11750076
transcript_27700.known	chr10	-	4241	10	FSM	ENSG00000198924.8	ENST00000369305.1	4241	10	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_9	16.6095316974885	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTCTGGTGTCTTTTGT	-113854072	True	NA	NA	False	AATAAA	-13	NA	113854383	113834728	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_113835313_113837061_113837204_113841405_113841561_113842342_113842489_113844103_113844245_113845684_113845804_113847201_113847336_113848979_113850645_113852722_113853848_113854353
transcript_27701.known	chr10	-	4450	9	FSM	ENSG00000198924.8	ENST00000361384.7	4450	9	0	0	0	0	multi-exon	TRUE	canonical	3	75	junction_7	9.30641579771719	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGTGTCTTTTGTTTTT	-113854059	False	NA	NA	False	AATAAA	-17	NA	113854082	113834724	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_113835313_113837061_113837204_113841405_113841561_113842342_113842489_113844103_113844245_113845684_113845804_113847201_113847336_113848979_113850645_113852722
transcript_27705.known	chr10	+	11051	11	FSM	ENSG00000196865.4	ENST00000369301.3	11051	11	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_10	35.2726522960778	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTTTCTGTTTTAATGT	113851639	True	NA	17	True	ATTAAA	-17	NA	113854660	113917194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_113855051_113858527_113858681_113876520_113876977_113879573_113879696_113884250_113884381_113898109_113898210_113901665_113901898_113902470_113902594_113903526_113903737_113904816_113905037_113908279
transcript_27713.known	chr10	+	552	2	FSM	ENSG00000196865.4	ENST00000468890.1	552	2	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGATAGTGGTTTGCCT	113854784	False	NA	NA	False	ATTAAA	-33	NA	113854823	113858852	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_113855051_113858527
transcript_27715.known	chr10	-	7228	16	FSM	ENSG00000165813.20	ENST00000369287.8	7228	16	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_13	10.1971673626661	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTAGTTTGATGGCATCT	-114171242	True	NA	-5	True	ATTAAA	-22	NA	114174203	114120861	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_114125227_114125885_114126106_114127460_114127672_114129890_114129972_114131146_114131337_114131928_114132185_114134912_114135056_114135890_114135978_114136147_114136247_114137185_114137291_114144496_114144617_114145548_114145762_114151091_114151221_114157553_114157681_114162636_114163330_114174014
transcript_2772.known	chr1	+	1116	6	FSM	ENSG00000177674.16	ENST00000491346.5	1116	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	439.657776003109	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTGAGTGTTGCAAGC	11726737	True	NA	NA	False	NA	NA	NA	11736141	11750488	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11736236_11745802_11745838_11745929_11746224_11747439_11747546_11748414_11748590_11750076
transcript_27720.nic	chr10	-	1500	6	ISM	ENSG00000165813.20	ENST00000369287.8	7228	16	-29	23635	0	-13471	5prime_fragment	FALSE	canonical	3	32	junction_3	13.5558105622644	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACGTACTGTAATACAATG	-114171271	True	NA	NA	False	ATTAAA	-23	NA	114174232	114144496	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_114144617_114145548_114145762_114151091_114151221_114157553_114157681_114162636_114163330_114174014
transcript_27721.known	chr10	-	7343	17	FSM	ENSG00000165813.20	ENST00000648613.1	7343	17	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_15	14.7604570982744	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTGTACTTATTAAATA	-114171271	True	NA	-44	True	TATAAA	-29	NA	114174232	114120900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_114125227_114125885_114126106_114127460_114127672_114129890_114129972_114131146_114131337_114131928_114132185_114134912_114135056_114135890_114135978_114136147_114136247_114137185_114137291_114144496_114144617_114145548_114145762_114151091_114151221_114157553_114157681_114162636_114163330_114173140_114173266_114174014
transcript_27727.nic	chr10	-	1054	3	ISM	ENSG00000165813.20	ENST00000369287.8	7228	16	-29	36676	0	4070	5prime_fragment	FALSE	canonical	3	38	junction_1	7	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCGAAGACTATACTTCA	-114171271	True	NA	NA	False	ATTAAA	-20	NA	114174232	114157537	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_114157681_114162636_114163330_114174014
transcript_27728.nic	chr10	-	997	3	ISM	ENSG00000165813.20	ENST00000369287.8	7228	16	-29	36733	0	4013	5prime_fragment	FALSE	canonical	3	38	junction_1	7	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACAGAAACTGAGAAGCAG	-114171271	True	NA	NA	False	AAAAAG	-28	NA	114174232	114157594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_114157681_114162636_114163330_114174014
transcript_27729.known	chr10	-	2035	3	FSM	ENSG00000165813.20	ENST00000369285.7	2035	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	2.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCAGTGCTGCTGCTATT	-114171241	True	NA	-5	True	AATAAA	-22	NA	114174202	114161607	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_114163330_114173140_114173266_114174014
transcript_27732.known	chr10	-	1928	2	FSM	ENSG00000165813.20	ENST00000369286.1	1928	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCAGTGCTGCTGCTATT	-114171259	True	NA	-5	True	AATAAA	-22	NA	114174220	114161607	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_114163330_114174014
transcript_27737.known	chr10	+	5846	14	FSM	ENSG00000165816.13	ENST00000392982.8	5846	14	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	2.76067052998867	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCTTAATTACTACTTAG	114239208	True	NA	7	True	AATAAA	-18	NA	114239253	114294489	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_114239570_114248703_114248766_114253650_114253726_114254914_114255049_114261185_114261296_114272739_114272935_114277913_114278048_114278718_114278852_114282515_114282572_114284862_114284971_114285938_114286512_114288937_114289490_114290239_114290366_114291217
transcript_27743.known	chr10	+	2875	12	FSM	ENSG00000165816.13	ENST00000298715.8	2875	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	2.6783490659375	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	114239284	False	NA	NA	False	NA	NA	NA	114239329	114289992	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_114239570_114248703_114248766_114253650_114253726_114254914_114255049_114261185_114261296_114272739_114272935_114277913_114278048_114278718_114278852_114282515_114282572_114284862_114284971_114285938_114286512_114288937
transcript_27746.known	chr10	-	3964	19	FSM	ENSG00000169129.15	ENST00000369271.7	3964	19	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_2	7.25569167815137	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCCTCAGTTCATGAAA	-114404720	False	NA	0	True	AATAAA	-19	NA	114404756	114294823	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_114296069_114296977_114297101_114297231_114297414_114299259_114299416_114300193_114300363_114300444_114300691_114301353_114301466_114302338_114302485_114304718_114304931_114307804_114307910_114308432_114308518_114310353_114310444_114313870_114314051_114315559_114315766_114323170_114323262_114331802_114331898_114333220_114333296_114340602_114340732_114404439
transcript_2775.known	chr1	+	942	6	FSM	ENSG00000177674.16	ENST00000476512.5	942	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	415.30114374993	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAGGAGCCCCCATGGG	11726712	True	NA	NA	False	NA	NA	NA	11736116	11750326	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11736236_11745802_11745838_11745987_11746224_11747439_11747546_11748414_11748611_11750076
transcript_27761.nic	chr10	-	2681	18	NIC	ENSG00000099204.21	novel	7560	23	NA	NA	-50	97	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	84.3732849370739	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTCCCATGTCCTACTGA	NA	False	NA	NA	False	AAAAAG	-14	NA	114526981	114435343	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_114436374_114437843_114437925_114439175_114439251_114440081_114440090_114441016_114441078_114441721_114441787_114444028_114444135_114445311_114445404_114447879_114448021_114451623_114451672_114453378_114453484_114465697_114465828_114468180_114468217_114472976_114473133_114473878_114473957_114487957_114488017_114491790_114491879_114526659
transcript_27763.nic	chr10	-	2532	18	NIC	ENSG00000099204.21	novel	7560	23	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	84.3732849370739	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCCCAGATTGGCCCAG	-114519362	True	NA	NA	False	AAGAAA	-14	NA	114526929	114435440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_114436374_114437843_114437925_114439175_114439251_114440081_114440090_114441016_114441078_114441721_114441787_114444028_114444135_114445311_114445404_114447879_114448021_114451623_114451672_114453378_114453484_114465697_114465828_114468180_114468217_114472976_114473133_114473878_114473957_114487957_114488017_114491790_114491879_114526659
transcript_27766.nic	chr10	-	2589	17	NIC	ENSG00000099204.21	novel	6841	18	NA	NA	-42	97	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	80.0232144052587	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTCCCATGTCCTACTGA	-114519406	True	NA	NA	False	AAAAAG	-14	NA	114526973	114435343	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_114436374_114437843_114437925_114439175_114439251_114440081_114440090_114441016_114441078_114441721_114441787_114444028_114444135_114445311_114445404_114447879_114448021_114451623_114451672_114465697_114465828_114468180_114468217_114472976_114473133_114473878_114473957_114487957_114488017_114491790_114491879_114526638
transcript_27767.nic	chr10	-	2576	17	NIC	ENSG00000099204.21	novel	6841	18	NA	NA	-50	97	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	71.5820115322278	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTCCCATGTCCTACTGA	NA	False	NA	NA	False	AAAAAG	-14	NA	114526981	114435343	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_114436374_114437843_114437925_114439175_114439251_114440081_114440090_114441016_114441078_114441721_114441787_114444028_114444135_114445311_114445404_114447879_114448021_114451623_114451672_114465697_114465828_114468180_114468217_114472976_114473133_114473878_114473957_114487957_114488017_114491790_114491879_114526659
transcript_27770.nic	chr10	-	2479	17	NIC	ENSG00000099204.21	novel	6841	18	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	71.5820115322278	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCCCAGATTGGCCCAG	NA	False	NA	NA	False	AAGAAA	-14	NA	114526981	114435440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_114436374_114437843_114437925_114439175_114439251_114440081_114440090_114441016_114441078_114441721_114441787_114444028_114444135_114445311_114445404_114447879_114448021_114451623_114451672_114465697_114465828_114468180_114468217_114472976_114473133_114473878_114473957_114487957_114488017_114491790_114491879_114526659
transcript_27773.known	chr10	-	2255	16	FSM	ENSG00000099204.21	ENST00000369253.6	2255	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	83.7492023179259	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCCCAGATTGGCCCAG	-114519268	True	NA	NA	False	AAGAAA	-14	NA	114526835	114435440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_114436374_114437843_114437925_114439175_114439251_114440081_114440090_114441016_114441078_114441721_114441787_114444028_114444135_114445311_114445404_114447879_114448021_114451623_114451672_114465697_114465828_114468180_114468217_114472976_114473133_114487957_114488017_114491790_114491879_114526659
transcript_2778.known	chr1	+	809	6	FSM	ENSG00000177674.16	ENST00000452018.6	809	6	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_2	412.853000473534	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGGTTCCCAGGCTGGA	11726768	True	NA	NA	False	NA	NA	NA	11736172	11750409	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11736236_11745802_11745838_11746126_11746224_11747439_11747546_11748414_11748590_11750076
transcript_2779.known	chr1	+	786	6	FSM	ENSG00000177674.16	ENST00000400895.6	786	6	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_2	392.812117939353	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAACCAAGAGGCCAGGAG	11726719	True	NA	NA	False	NA	NA	NA	11736123	11750316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11736236_11745802_11745838_11746126_11746224_11747439_11747546_11748414_11748611_11750076
transcript_27794.known	chr10	-	854	8	FSM	ENSG00000099204.21	ENST00000428430.1	854	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	70.3205488590407	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCCATCTACAAACAGCAT	-114519351	True	NA	NA	False	NA	NA	NA	114526918	114451644	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_114451672_114465697_114465828_114468180_114468217_114472976_114473133_114473878_114473957_114487957_114488017_114491790_114491879_114526638
transcript_27801.known	chr10	+	5774	17	FSM	ENSG00000151553.15	ENST00000369248.9	5774	17	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_8	9.22970747098737	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCTTATGTTTTTGTAAAA	114820078	True	NA	NA	False	AATAAA	-20	NA	114821779	114864717	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_114822124_114830851_114830931_114833232_114833403_114835536_114835642_114836123_114836247_114842932_114843227_114843740_114843938_114845366_114845482_114846012_114846090_114846174_114846368_114846558_114846729_114847089_114847234_114848646_114848738_114855196_114855341_114860748_114860890_114861230_114861335_114861434
transcript_27805.known	chr10	+	3406	8	FSM	ENSG00000165832.6	ENST00000298746.5	3406	8	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_7	21.2861936667016	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTTGCATGAGTTATTT	114934188	True	NA	11	True	AATAAA	-20	NA	114938194	114977676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_114938540_114942644_114942744_114951093_114951150_114959725_114959808_114970367_114970441_114972134_114972275_114974328_114974386_114975122
transcript_27810.known	chr10	+	584	4	FSM	ENSG00000165832.6	ENST00000485065.1	584	4	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_2	16.739839372653	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGCCTCTTTTTCTATA	114934379	False	NA	-1	True	AATAAA	-10	NA	114938385	114960000	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_114938540_114942644_114942744_114951093_114951150_114959725
transcript_27812.known	chr10	+	1818	8	FSM	ENSG00000107518.18	ENST00000609571.5	1818	8	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	7.54848275064166	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGAGTTATTTGAGATTG	115091978	True	NA	24	True	AATAAA	-25	NA	115093364	115171376	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_115094044_115120184_115120269_115121698_115121813_115127592_115127722_115129326_115129536_115160039_115160215_115165557_115165646_115171036
transcript_27813.known	chr10	-	4887	10	FSM	ENSG00000151892.16	ENST00000439649.8	4887	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	4.9541104021351	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGTGTGGTTTCCATTTC	-116272877	True	NA	NA	False	NA	NA	NA	116273009	116061281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_116064545_116065572_116065627_116089740_116089923_116093701_116093837_116096654_116096765_116125220_116125558_116269502_116269587_116270821_116271116_116271989_116272276_116272867
transcript_27814.known	chr10	-	2562	10	FSM	ENSG00000151892.16	ENST00000682743.1	2562	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	6.34209919681348	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTGCCACAAAGAAGAT	NA	False	NA	NA	False	TATAAA	-25	NA	116273608	116063910	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_116064545_116065572_116065627_116089740_116089923_116093701_116093837_116096654_116096765_116125220_116125558_116269502_116269587_116270821_116271116_116271989_116272276_116273162
transcript_27823.known	chr10	-	5841	13	FSM	ENSG00000165868.16	ENST00000635765.1	5841	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	6.03232035695129	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCCCAGATTTTTTTTC	-116849431	True	NA	0	True	AATAAA	-19	NA	116849741	116671191	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_116675419_116676398_116676503_116679502_116679762_116681151_116681257_116681790_116681878_116683790_116683963_116692350_116692468_116698634_116698740_116700942_116701130_116705150_116705279_116707199_116707286_116834934_116835023_116849565
transcript_27824.known	chr10	-	5714	12	FSM	ENSG00000165868.16	ENST00000369209.8	5714	12	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_7	3.67929206269965	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCCCAGATTTTTTTTC	-116742289	True	NA	0	True	AATAAA	-19	NA	116742566	116671191	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_116675419_116676398_116676503_116679502_116679762_116681151_116681257_116681790_116681878_116683790_116683963_116692350_116692468_116698634_116698740_116700942_116701130_116705150_116705279_116707199_116707286_116742429
transcript_27828.known	chr10	-	5623	11	FSM	ENSG00000165868.16	ENST00000674459.1	5623	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	5.93380147965872	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATGTGGCCCAGATTTT	-116742289	True	NA	-5	True	AATAAA	-14	NA	116742566	116671196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_116675419_116676398_116676503_116679502_116679762_116681151_116681257_116681790_116681878_116683790_116683963_116692350_116692468_116698634_116698740_116700942_116701130_116705150_116705279_116742429
transcript_27833.known	chr10	-	1452	5	FSM	ENSG00000165868.16	ENST00000481291.2	1452	5	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	1.22474487139159	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCTGCAGGGAGTGGG	-116742318	True	NA	NA	False	NA	NA	NA	116742595	116697854	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_116698740_116700942_116701130_116705150_116705279_116707199_116707286_116742429
transcript_27837.nic	chr10	-	2644	6	NIC	ENSG00000165863.17	novel	966	6	NA	NA	-49	1485	combination_of_known_junctions	FALSE	canonical	3	36	junction_3	18.9589029218465	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTCTTTTTAATATTTT	-116668161	True	NA	-26	True	AATAAA	-20	NA	116670313	116662210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_116664052_116664173_116664272_116664760_116664948_116665607_116665827_116668257_116668324_116670080
transcript_27838.nic	chr10	-	1159	6	NIC	ENSG00000165863.17	novel	966	6	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_3	18.9589029218465	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAAAGTTTCTTGTGCGG	-116668161	True	NA	-4	True	AATAAA	-18	NA	116670313	116663695	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_116664052_116664173_116664272_116664760_116664948_116665607_116665827_116668257_116668324_116670080
transcript_27840.nic	chr10	-	1069	6	NIC	ENSG00000165863.17	novel	966	6	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_3	18.9589029218465	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTGCATCCTGAGTGGTT	-116668161	True	NA	-1	True	AATAAA	-31	NA	116670313	116663785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_116664052_116664173_116664272_116664760_116664948_116665607_116665827_116668257_116668324_116670080
transcript_27841.nic	chr10	-	3304	5	NIC	ENSG00000165863.17	novel	1529	5	NA	NA	-49	1485	intron_retention	FALSE	canonical	3	37	junction_2	16.6789538041209	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTCTTTTTAATATTTT	-116668161	True	NA	-26	True	AATAAA	-20	NA	116670313	116662210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_116664052_116664173_116664272_116664760_116665827_116668257_116668324_116670080
transcript_27842.nic	chr10	-	1819	5	NIC	ENSG00000165863.17	novel	966	6	NA	NA	-49	0	intron_retention	FALSE	canonical	3	37	junction_2	16.6789538041209	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAAAGTTTCTTGTGCGG	-116668161	True	NA	-4	True	AATAAA	-18	NA	116670313	116663695	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_116664052_116664173_116664272_116664760_116665827_116668257_116668324_116670080
transcript_27843.nic	chr10	-	1729	5	NIC	ENSG00000165863.17	novel	1529	5	NA	NA	-49	0	intron_retention	FALSE	canonical	3	37	junction_2	16.6789538041209	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTGCATCCTGAGTGGTT	-116668161	True	NA	-1	True	AATAAA	-31	NA	116670313	116663785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_116664052_116664173_116664272_116664760_116665827_116668257_116668324_116670080
transcript_27846.known	chr10	-	1791	3	FSM	ENSG00000165863.17	ENST00000588224.1	1791	3	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	0.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTTGTTTTAGAATATA	-116668112	True	NA	60	True	AATAAA	-23	NA	116670264	116664285	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_116665827_116668257_116668324_116670080
transcript_27849.known	chr10	-	6871	17	FSM	ENSG00000187164.20	ENST00000355371.9	6871	17	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_10	10.9457112034806	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGCCAGTTTTTATATAC	-117003706	True	NA	2	True	AATAAA	-19	NA	117005187	116881476	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_116886567_116901764_116901958_116906626_116906748_116911789_116911844_116915374_116915485_116921433_116921517_116927791_116927892_116929848_116930003_116940465_116940613_116944923_116945019_116948915_116948998_116951908_116952007_116954041_116954211_116960135_116960231_116968651_116968713_116979255_116979309_117005021
transcript_27853.known	chr10	+	3831	16	FSM	ENSG00000165646.14	ENST00000644641.2	3831	16	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_8	10.2493360218547	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGCCTGTTTGTATTC	117239838	True	NA	11	True	AATAAA	-15	NA	117241113	117279430	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_117241221_117241678_117241815_117243970_117244314_117253398_117253458_117254047_117254132_117254404_117254498_117255276_117255367_117255478_117255523_117255596_117255658_117257796_117257893_117266732_117266812_117266983_117267036_117267672_117267737_117270070_117270191_117270329_117270464_117277161
transcript_27862.known	chr10	-	9672	5	FSM	ENSG00000165650.12	ENST00000334464.7	9672	5	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	14.3069039278245	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATCTCAGTCACTTTCA	-117371194	True	NA	NA	False	ATTAAA	-22	NA	117375440	117277273	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_117285472_117290185_117290349_117318871_117318975_117340979_117341103_117374355
transcript_27869.known	chr10	-	6399	5	FSM	ENSG00000107560.12	ENST00000355624.8	6399	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	10.8397416943394	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGTTGTCAACATTTATT	-118046376	True	NA	0	True	ATTAAA	-15	NA	118046941	118004915	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_118009226_118015064_118015111_118038971_118039441_118040122_118040566_118045810
transcript_2787.known	chr1	+	1100	5	FSM	ENSG00000177674.16	ENST00000376629.8	1100	5	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_4	326.56727867317	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCTGTGTTTTGAACCAC	11726742	True	NA	19	True	ATTAAA	-20	NA	11736146	11750771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11736236_11745802_11745838_11747439_11747546_11748414_11748590_11750076
transcript_27875.known	chr10	-	13898	9	FSM	ENSG00000165669.14	ENST00000369183.9	13898	9	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_8	50.0010937380374	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATAATTATTACTTTATTG	-118337965	True	NA	NA	False	AATAAA	-21	NA	118342324	118297924	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_118310909_118311206_118311314_118326153_118326244_118335113_118335214_118335395_118335427_118335553_118335642_118336181_118336424_118341726_118341928_118342269
transcript_2788.known	chr1	+	1130	5	FSM	ENSG00000177674.16	ENST00000314340.10	1130	5	0	0	0	0	multi-exon	FALSE	canonical	3	789	junction_2	125.736579800788	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGCTGTGTTTTGAACC	11726731	True	NA	17	True	ATTAAA	-18	NA	11736135	11750769	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11736236_11745802_11745838_11747439_11747546_11748414_11748611_11750076
transcript_27880.known	chr10	-	872	8	FSM	ENSG00000165669.14	ENST00000369172.8	872	8	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_7	91.9145565962526	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAAATTTGGGATTTTGA	-118337961	True	NA	-25	True	ACTAAA	-12	NA	118342320	118310745	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_118310909_118311206_118311314_118326153_118326244_118335113_118335214_118335395_118335427_118335553_118335642_118336181_118336424_118342269
transcript_27886.known	chr10	-	11035	9	FSM	ENSG00000151893.15	ENST00000369151.8	11035	9	0	0	0	0	multi-exon	FALSE	canonical	2	41	junction_2	11.5298525576002	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTTGTTTTTGCTGAAT	-118748041	True	NA	-2	True	AATAAA	-22	NA	118754970	118676410	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_118686169_118686597_118686642_118691264_118691404_118695140_118695231_118701305_118701409_118707491_118707588_118729294_118729398_118730283_118730411_118754395
transcript_27892.known	chr10	-	4495	23	FSM	ENSG00000107581.13	ENST00000541549.2	4495	23	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	223.008875782301	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAAAGAAAAACTAAAA	-119067710	True	NA	NA	False	NA	NA	NA	119080823	119035792	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_119035984_119036030_119036269_119037118_119037310_119038237_119038440_119041993_119042773_119044053_119044143_119049800_119049986_119050520_119050675_119051198_119051322_119056739_119056854_119056935_119057041_119057955_119058304_119059211_119059398_119059601_119059719_119060745_119060845_119061223_119061329_119065398_119065571_119069445_119069655_119070885_119071086_119072889_119073054_119073440_119073578_119073746_119073938_119080627
transcript_27893.known	chr10	-	6659	22	FSM	ENSG00000107581.13	ENST00000369144.8	6659	22	0	0	0	0	multi-exon	FALSE	canonical	3	613	junction_18	157.042449884608	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTTCTCATCAAAGCTAA	-119067704	True	NA	-9	True	AATAAA	-18	NA	119080817	119033669	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_119036269_119037118_119037310_119038237_119038440_119041993_119042773_119044053_119044143_119049800_119049986_119050520_119050675_119051198_119051322_119056739_119056854_119056935_119057041_119057955_119058304_119059211_119059398_119059601_119059719_119060745_119060845_119061223_119061329_119065398_119065571_119069445_119069655_119070885_119071086_119072889_119073054_119073440_119073578_119073746_119073938_119080627
transcript_27901.nic	chr10	-	2758	17	ISM	ENSG00000107581.13	ENST00000541549.2	4495	23	-61	14116	-61	6967	5prime_fragment	FALSE	canonical	3	613	junction_13	65.4368732061672	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAGAAGAAGTGGAAAGGAA	-119067771	True	NA	-46	True	AAGAAA	-1	NA	119080884	119049908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_119049986_119050520_119050675_119051198_119051322_119056739_119056854_119056935_119057041_119057955_119058304_119059211_119059398_119059601_119059719_119060745_119060845_119061223_119061329_119065398_119065571_119069445_119069655_119070885_119071086_119072889_119073054_119073440_119073578_119073746_119073938_119080627
transcript_27903.nic	chr10	-	2638	16	ISM	ENSG00000107581.13	ENST00000541549.2	4495	23	-61	14771	-61	6312	5prime_fragment	FALSE	canonical	3	613	junction_12	46.9281247109757	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGGAGGAGCAGAGAAG	-119067771	True	NA	12	True	NA	NA	NA	119080884	119050563	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_119050675_119051198_119051322_119056739_119056854_119056935_119057041_119057955_119058304_119059211_119059398_119059601_119059719_119060745_119060845_119061223_119061329_119065398_119065571_119069445_119069655_119070885_119071086_119072889_119073054_119073440_119073578_119073746_119073938_119080627
transcript_27910.nic	chr10	-	2402	14	ISM	ENSG00000107581.13	ENST00000541549.2	4495	23	-61	20949	-61	134	5prime_fragment	FALSE	canonical	3	613	junction_10	41.7881385169292	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAAGTTTTTTATTTAAT	-119067771	True	NA	NA	False	ATTAAA	-35	NA	119080884	119056741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_119056854_119056935_119057041_119057955_119058304_119059211_119059398_119059601_119059719_119060745_119060845_119061223_119061329_119065398_119065571_119069445_119069655_119070885_119071086_119072889_119073054_119073440_119073578_119073746_119073938_119080627
transcript_27913.nic	chr10	-	2254	13	ISM	ENSG00000107581.13	ENST00000541549.2	4495	23	-61	21179	-61	-96	5prime_fragment	FALSE	canonical	3	613	junction_9	43.2456645225854	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTTCAAGAACGCCTAAA	-119067771	True	NA	16	True	AAGAAA	-6	NA	119080884	119056971	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_119057041_119057955_119058304_119059211_119059398_119059601_119059719_119060745_119060845_119061223_119061329_119065398_119065571_119069445_119069655_119070885_119071086_119072889_119073054_119073440_119073578_119073746_119073938_119080627
transcript_27915.nic	chr10	-	2111	12	ISM	ENSG00000107581.13	ENST00000541549.2	4495	23	-61	22237	-61	-1154	5prime_fragment	FALSE	canonical	3	613	junction_8	44.7810098476487	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCCGAGAGCGTTTGGAG	-119067771	True	NA	NA	False	AAAAAG	-5	NA	119080884	119058029	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_119058304_119059211_119059398_119059601_119059719_119060745_119060845_119061223_119061329_119065398_119065571_119069445_119069655_119070885_119071086_119072889_119073054_119073440_119073578_119073746_119073938_119080627
transcript_2793.known	chr1	+	1067	4	FSM	ENSG00000177674.16	ENST00000376637.7	1067	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	454.489457156782	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCACAACCTCCAGCCTCC	11726679	True	NA	-42	True	NA	NA	NA	11736083	11750710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11736236_11747439_11747546_11748414_11748590_11750076
transcript_27933.nnic	chr10	+	1938	10	NIC	ENSG00000119979.18	novel	2829	12	NA	NA	0	15	intron_retention	FALSE	canonical	2	2	junction_2	143.353573075736	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTTCCCGGCCTTTGAA	119098464	True	NA	NA	False	NA	NA	NA	119104085	119137195	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_119104198_119104763_119105023_119107967_119108165_119111848_119111929_119117518_119117668_119120340_119120453_119123468_119123570_119129514_119129623_119132514_119132610_119136470
transcript_27944.nic	chr10	+	1734	9	NIC	ENSG00000119979.18	novel	2441	9	NA	NA	-35	15	intron_retention	FALSE	canonical	3	139	junction_1	82.6089243060337	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTTCCCGGCCTTTGAA	119098429	True	NA	NA	False	NA	NA	NA	119104050	119137195	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_119104198_119107947_119108165_119111848_119111929_119117518_119117668_119120340_119120453_119123468_119123570_119129514_119129623_119132514_119132610_119136470
transcript_27945.nic	chr10	+	2248	9	NIC	ENSG00000119979.18	novel	2441	9	NA	NA	-35	-117	intron_retention	FALSE	canonical	3	139	junction_1	82.6089243060337	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTATTGGGTCTTTCATCT	119098429	True	NA	-54	True	NA	NA	NA	119104050	119137709	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_119104198_119107947_119108165_119111848_119111929_119117518_119117668_119120340_119120453_119123468_119123570_119129514_119129623_119132514_119132610_119136470
transcript_27949.known	chr10	+	2441	9	FSM	ENSG00000119979.18	ENST00000361432.3	2441	9	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	59.9998697915254	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTTTAGGTGGGTGACG	119098491	True	NA	26	True	AATAAA	-23	NA	119104112	119137984	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_119104198_119107967_119108165_119111848_119111929_119117518_119117668_119120340_119120453_119123468_119123570_119129514_119129623_119132514_119132610_119136470
transcript_27951.nic	chr10	+	1113	9	NIC	ENSG00000119979.18	novel	2441	9	NA	NA	-35	0	combination_of_known_junctions	TRUE	canonical	3	27	junction_8	124.575278446408	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGGTTT	119098429	True	NA	NA	False	NA	NA	NA	119104050	119137180	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_119104198_119107967_119108165_119111848_119111929_119117518_119117668_119120340_119120453_119123468_119123570_119129514_119129623_119132514_119132610_119137056
transcript_27962.known	chr10	+	851	7	FSM	ENSG00000119979.18	ENST00000487888.5	851	7	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	95.0498407269693	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCAAAAGGTTTGTTCTC	119098482	True	NA	NA	False	NA	NA	NA	119104103	119129612	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_119104198_119107947_119108165_119111848_119111929_119117518_119117668_119120340_119120453_119123468_119123570_119129514
transcript_27972.known	chr10	+	992	2	FSM	ENSG00000119979.18	ENST00000472379.2	992	2	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATATTTTGAACTCAGCAG	119098464	True	NA	NA	False	AATAAA	-15	NA	119104085	119105643	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_119104198_119104763
transcript_27976.known	chr10	+	2829	12	FSM	ENSG00000119979.18	ENST00000648560.1	2829	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	183.138027700646	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGCAAATAATTGAAAATTA	119098495	True	NA	63	True	NA	NA	NA	119104116	119137826	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_119104198_119104763_119105007_119105310_119105496_119107967_119108165_119110192_119110315_119111848_119111929_119117518_119117668_119120340_119120453_119123468_119123570_119129514_119129623_119132514_119132610_119136470
transcript_27979.known	chr10	-	1556	14	FSM	ENSG00000183605.17	ENST00000355697.7	1556	14	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_11	32.6284444099835	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAACCTTTGCCGCCCTC	-119163456	True	NA	NA	False	NA	NA	NA	119165714	119140766	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_119141320_119146235_119146354_119147774_119147861_119155061_119155178_119156677_119156757_119157667_119157734_119157870_119157928_119158008_119158063_119159727_119159754_119160914_119160970_119161054_119161082_119162339_119162415_119164130_119164197_119165536
transcript_27983.nic	chr10	-	2760	12	NIC	ENSG00000183605.17	novel	1556	14	NA	NA	-10	-3	intron_retention	FALSE	canonical	3	265	junction_11	21.1284931583039	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACACAGAGTCCACCGTGC	-119165709	False	NA	-13	True	AATAAA	-29	NA	119165724	119140915	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_119141320_119146235_119146354_119147774_119147861_119155061_119155178_119156677_119156757_119157667_119157734_119157870_119157928_119158008_119158063_119159727_119159754_119160914_119162415_119164130_119164197_119165536
transcript_27987.known	chr10	-	1553	7	FSM	ENSG00000165672.7	ENST00000298510.4	1553	7	0	0	0	0	multi-exon	FALSE	canonical	3	4576	junction_6	251.973157741499	1293	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCATTTTACCACCAGTA	-119152168	True	NA	-22	True	AATAAA	-15	NA	119178812	119167719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_119168534_119169176_119169343_119172381_119172486_119173736_119173873_119174450_119174593_119177020_119177154_119178754
transcript_28.known	ERCC-00073	+	587	1	FSM	ERCC-00073A	DQ668358	587	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	587	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00073_+_0_600
transcript_2800.known	chr1	+	5589	23	FSM	ENSG00000011021.23	ENST00000346436.11	5589	23	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_11	22.0267024276152	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTCCTTTAGCCTTT	11804256	True	NA	5	True	AATAAA	-15	NA	11806190	11843130	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11806350_11807130_11807191_11815845_11815912_11816614_11816681_11819487_11819555_11822694_11822802_11823706_11823834_11824485_11824554_11826155_11826215_11827088_11827222_11828105_11828220_11828457_11828625_11829195_11829323_11833514_11833639_11833876_11834031_11834235_11834396_11834483_11834591_11835966_11836154_11836998_11837157_11837342_11837500_11838334_11838443_11838534_11838661_11840142
transcript_28001.known	chr10	-	923	5	FSM	ENSG00000148908.15	ENST00000369103.3	923	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_2	7.90569415042095	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATCACACTACCTTTTAC	-119539452	True	NA	-24	True	ATTAAA	-26	NA	119542719	119499816	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_119500260_119515508_119515653_119526031_119526119_119527305_119527425_119542589
transcript_28003.nnic	chr10	-	2076	15	NNC	ENSG00000151923.18	novel	2321	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_9	99.8826862895075	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGACTACAAATTTTGAT	-119589802	True	NA	-33	True	AATAAA	-15	NA	119596964	119575411	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_119575792_119576610_119576751_119576846_119576906_119577079_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119580470_119580539_119580777_119580847_119581921_119582010_119582168_119582224_119582458_119582558_119588151_119588249_119596433
transcript_28011.nic	chr10	-	2390	14	NIC	ENSG00000151923.18	novel	2321	13	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_9	94.2152891523407	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGACTACAAATTTTGAT	-119597016	False	NA	-33	True	AATAAA	-15	NA	119597039	119575411	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_119575792_119576610_119576751_119576846_119576906_119577079_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119580470_119580847_119581921_119582010_119582168_119582224_119582458_119582558_119588151_119588249_119596433
transcript_28020.nic	chr10	-	2014	13	NIC	ENSG00000151923.18	novel	2321	13	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_3	85.2852647817247	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGACTACAAATTTTGAT	-119597016	False	NA	-33	True	AATAAA	-15	NA	119597039	119575411	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_119575792_119576610_119576751_119576846_119576906_119577079_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119581921_119582010_119582168_119582224_119582458_119582558_119588151_119588249_119596433
transcript_28025.known	chr10	-	2321	13	FSM	ENSG00000151923.18	ENST00000497671.5	2321	13	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_8	81.1799698201471	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGACTACAAATTTTGAT	-119589867	True	NA	-33	True	AATAAA	-15	NA	119597029	119575411	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_119575792_119576610_119576751_119577079_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119580470_119580847_119581921_119582010_119582168_119582224_119582458_119582558_119588151_119588249_119596433
transcript_28026.nic	chr10	-	2053	13	NIC	ENSG00000151923.18	novel	2321	13	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_12	90.3469777518257	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGACTACAAATTTTGAT	-119597052	False	NA	-33	True	AATAAA	-15	NA	119597075	119575411	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_119575792_119576610_119576751_119577079_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119581921_119582010_119582168_119582224_119582458_119582558_119588151_119588249_119593451_119593514_119596433
transcript_28033.known	chr10	-	3827	12	FSM	ENSG00000151923.18	ENST00000436547.7	3827	12	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_7	60.8408029679517	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGACTGAAGTGTCCTT	-119589802	True	NA	16	True	AATAAA	-33	NA	119596964	119573464	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_119575792_119576610_119576751_119577079_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119581921_119582010_119582168_119582224_119582458_119582558_119588151_119588249_119596433
transcript_28034.known	chr10	-	5072	12	FSM	ENSG00000151923.18	ENST00000369093.6	5072	12	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_10	71.6710806507959	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTTTTTCTTATTGTCG	-119596472	False	65	-4	True	AATAAA	-19	NA	119596495	119571801	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_119575792_119576610_119576751_119577079_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119581921_119582010_119582168_119582224_119582458_119582609_119588151_119588249_119596433
transcript_28036.nic	chr10	-	2603	12	NIC	ENSG00000151923.18	novel	2321	13	NA	NA	-18	0	intron_retention	FALSE	canonical	3	30	junction_7	84.6351430436348	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGACTACAAATTTTGAT	-119589820	True	NA	-33	True	AATAAA	-15	NA	119596982	119575411	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_119575792_119576610_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119580470_119580847_119581921_119582010_119582168_119582224_119582458_119582558_119588151_119588249_119596433
transcript_28041.known	chr10	-	2222	11	FSM	ENSG00000151923.18	ENST00000489822.5	2222	11	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_6	63.806269284452	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTGATATAATAGGAAAAA	-119589802	True	NA	-20	True	AATAAA	-28	NA	119596964	119575398	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_119575792_119576610_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119581921_119582010_119582168_119582224_119582458_119582558_119588151_119588249_119596433
transcript_28051.known	chr10	+	2561	4	FSM	ENSG00000151929.10	ENST00000369085.8	2561	4	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_3	11.5758369027902	177	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTTTGTGGTTTCTAAA	119648888	True	NA	NA	False	AATAAA	-20	NA	119651379	119677819	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_119651856_119669850_119670178_119672254_119672657_119676463
transcript_28053.known	chr10	+	4979	20	FSM	ENSG00000198825.15	ENST00000650623.2	4979	20	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_12	58.5939121188893	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGGGTATGAGAATTCC	119724591	True	NA	11	True	AATAAA	-23	NA	119726049	119829147	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_119726360_119751075_119751157_119781634_119781772_119791516_119791646_119791868_119792037_119792156_119792214_119796714_119796914_119797460_119797641_119798542_119798611_119804172_119804298_119805383_119805462_119806359_119806481_119807931_119808061_119810099_119810218_119811756_119811956_119820845_119820918_119822430_119822505_119823070_119823200_119823814_119823903_119826630
transcript_28058.known	chr10	+	3693	6	FSM	ENSG00000198825.15	ENST00000650409.1	3693	6	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	42.0123791280618	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGGGTATGAGAATTCC	119804737	True	NA	11	True	AATAAA	-23	NA	119818726	119829147	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_119819540_119820845_119820918_119822430_119822505_119823070_119823200_119823814_119823903_119826630
transcript_28061.known	chr10	-	4169	16	FSM	ENSG00000197771.13	ENST00000360003.7	4169	16	0	0	0	0	multi-exon	FALSE	canonical	1	150	junction_11	143.106704556037	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGGTTGTATTTTCTCC	-119872726	False	NA	36	True	TTTAAA	-20	NA	119872754	119829403	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_119831601_119832011_119832101_119835539_119835705_119836895_119837030_119838534_119838701_119840842_119840961_119842471_119842596_119843247_119843427_119847612_119847714_119849424_119849577_119853049_119853195_119857337_119857440_119858883_119858926_119859040_119859182_119859798_119859885_119872526
transcript_28067.known	chr10	-	4216	16	FSM	ENSG00000197771.13	ENST00000369077.4	4216	16	0	0	0	0	multi-exon	FALSE	canonical	1	150	junction_11	126.795828883375	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTAGAGTTTAAACGT	-119866700	True	NA	0	True	NA	NA	NA	119872843	119829439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_119831601_119832011_119832101_119835539_119835705_119836895_119837030_119838534_119838701_119840842_119840961_119842471_119842596_119843253_119843427_119847612_119847714_119849424_119849577_119853049_119853195_119857337_119857440_119858883_119858926_119859040_119859182_119859798_119859885_119872526
transcript_2808.known	chr1	-	7018	12	FSM	ENSG00000177000.13	ENST00000376590.9	7018	12	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_11	8.42958191369355	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTACTGTCCTCGTGTACC	-11805117	True	NA	NA	False	AATAAA	-22	NA	11805964	11785722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_11790899_11791206_11791327_11792277_11792380_11793906_11794090_11794357_11794539_11794728_11794864_11795097_11795349_11796205_11796400_11800211_11800323_11801160_11801400_11802880_11803130_11805887
transcript_28082.known	chr10	+	7148	19	FSM	ENSG00000107651.14	ENST00000369075.8	7148	19	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_10	24.9782621542595	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTCTAGTGGTGCTTTT	119887305	True	NA	NA	False	ATTAAA	-16	NA	119892729	119944657	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_119892946_119898426_119898960_119902798_119903010_119904083_119904278_119909040_119909131_119912043_119912165_119914729_119914820_119915747_119915890_119917835_119918045_119918392_119918512_119919443_119919597_119920888_119920985_119926035_119926228_119929606_119929763_119930328_119930432_119932132_119932319_119933004_119933168_119933685_119933788_119940585
transcript_2809.nic	chr1	-	3284	12	NIC	ENSG00000177000.13	novel	2820	13	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_11	10.5572034864611	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTGAGCCTTGAGAGAA	NA	False	NA	-45	True	NA	NA	NA	11806034	11790067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_11790899_11791206_11791327_11792277_11792380_11793906_11794090_11794357_11794539_11794728_11794864_11795097_11795349_11796205_11796400_11800211_11800323_11801160_11801400_11802880_11803130_11805346
transcript_28090.nic	chr10	+	2837	16	ISM	ENSG00000107651.14	ENST00000369075.8	7148	19	-40	12353	-40	-1466	5prime_fragment	FALSE	canonical	3	255	junction_10	23.0240454018547	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGTAGTTGAAGGTAAAT	119887265	True	NA	28	True	AAGAAA	-2	NA	119892689	119932304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_119892946_119898426_119898960_119902798_119903010_119904083_119904278_119909040_119909131_119912043_119912165_119914729_119914820_119915747_119915890_119917835_119918045_119918392_119918512_119919443_119919597_119920888_119920985_119926035_119926228_119929606_119929763_119930328_119930432_119932132
transcript_28095.known	chr10	-	483	1	FSM	ENSG00000220842.6	ENST00000495531.1	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	321	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGGTGTTAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	120355183	120354700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_120354700_120355200
transcript_28096.known	chr10	+	4545	29	FSM	ENSG00000120008.16	ENST00000263461.11	4545	29	0	0	0	0	multi-exon	TRUE	canonical	1	51	junction_28	30.8055123612112	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTTTGTGTTCTCTGCAT	120847039	True	NA	15	True	AATAAA	-17	NA	120851361	120909524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_120851507_120852523_120852636_120858642_120858797_120860108_120860283_120862734_120862922_120865046_120865213_120865629_120865745_120866568_120866765_120867065_120867170_120871169_120871347_120873838_120873924_120878352_120878460_120880825_120880902_120883779_120883889_120885813_120885939_120886688_120886837_120889077_120889185_120889894_120890010_120890715_120890888_120900028_120900138_120901035_120901099_120902256_120902323_120903054_120903233_120904046_120904143_120904645_120904812_120905318_120905417_120905875_120906022_120906775_120906856_120908555
transcript_28108.known	chr10	+	2229	1	FSM	ENSG00000120008.16	ENST00000604714.1	2229	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCTTTGTGTTCTCTGCA	120907282	False	NA	14	True	AATAAA	-16	NA	120907294	120909523	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_120907300_120909500
transcript_28110.known	chr10	-	4624	18	FSM	ENSG00000066468.24	ENST00000358487.10	4624	18	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_9	133.526872222547	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCGTGTCTTACCAAATG	-121593391	True	NA	-1	True	AATAAA	-24	NA	121598444	121478331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_121480022_121483697_121483804_121485394_121485533_121487353_121487425_121487990_121488114_121496531_121496723_121498494_121498606_121500825_121500948_121503789_121503942_121515116_121515320_121517318_121517464_121519978_121520170_121538591_121538716_121551289_121551460_121564501_121564580_121565437_121565705_121593708_121593968_121597961
transcript_28112.known	chr10	-	3061	18	FSM	ENSG00000066468.24	ENST00000457416.6	3061	18	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_9	178.464190043907	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGACTGTGTCTGCCTGTCC	-121593350	True	NA	NA	False	CATAAA	-20	NA	121598403	121479856	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_121480022_121483697_121483804_121485394_121485533_121487353_121487425_121487990_121488114_121496531_121496723_121498494_121498606_121500825_121500948_121503789_121503942_121515116_121515320_121518681_121518830_121519978_121520170_121538591_121538716_121551289_121551460_121564501_121564580_121565437_121565705_121593708_121593968_121597961
transcript_28119.known	chr10	-	4369	17	FSM	ENSG00000066468.24	ENST00000613048.4	4369	17	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_9	157.235094683089	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTCGTGTCTTACCAAA	-121593405	True	NA	-3	True	AATAAA	-22	NA	121598458	121478333	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_121480022_121483697_121483804_121485394_121485533_121487353_121487425_121487990_121488114_121496531_121496723_121498494_121498606_121500825_121500948_121503789_121503942_121515116_121515320_121517318_121517464_121519978_121520170_121538591_121538716_121551289_121551460_121564501_121564580_121593708_121593968_121597961
transcript_28126.known	chr10	-	3001	17	FSM	ENSG00000066468.24	ENST00000360144.7	3001	17	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_9	216.426228770914	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAGAAAGAAACCGGG	-121593379	True	NA	NA	False	AATAAA	-3	NA	121598432	121481834	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_121482178_121483697_121483804_121485394_121485533_121487353_121487425_121487990_121488114_121496531_121496723_121498494_121498606_121500825_121500948_121503789_121503942_121515116_121515320_121518681_121518830_121519978_121520170_121538591_121538716_121551289_121551460_121564501_121564580_121593708_121593968_121597961
transcript_28127.known	chr10	-	3547	16	FSM	ENSG00000066468.24	ENST00000356226.8	3547	16	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_14	150.68412878159	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTTTTGATTTATTTGT	-121593405	True	NA	-104	True	AATATA	-19	NA	121598458	121479071	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_121480022_121483697_121483804_121485394_121485533_121487353_121487425_121487990_121488114_121496531_121496723_121498494_121498606_121500825_121500948_121503789_121503942_121515122_121515320_121517318_121517464_121519978_121520170_121538591_121538716_121551289_121551460_121593708_121593968_121597961
transcript_28128.known	chr10	-	3003	16	FSM	ENSG00000066468.24	ENST00000369059.5	3003	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_9	211.120565870152	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCACCTGCCGTGCGTA	-121593399	True	NA	NA	False	NA	NA	NA	121598452	121479618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_121480022_121483697_121483804_121485394_121485533_121487353_121487425_121487990_121488114_121496531_121496723_121498494_121498606_121500825_121500948_121503789_121503942_121515116_121515320_121518681_121518830_121519978_121520170_121538591_121538716_121551289_121551460_121593708_121593968_121597961
transcript_2813.known	chr1	-	549	3	FSM	ENSG00000177000.13	ENST00000642002.1	549	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	8.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTCAGACAAGGAGACCTC	NA	False	NA	NA	False	NA	NA	NA	11806103	11801332	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_11801417_11802880_11803130_11805887
transcript_28131.known	chr10	-	3887	16	FSM	ENSG00000066468.24	ENST00000682550.1	3887	16	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_15	184.430968717898	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTATTTTTTTAATACTC	-121596567	False	5053	-16	True	AATAAA	-9	NA	121596588	121478346	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_121480022_121483697_121483804_121485394_121485533_121487353_121487425_121487990_121488114_121496531_121496723_121498494_121498606_121500825_121500948_121503789_121503942_121515122_121515320_121517318_121517464_121519978_121520170_121538591_121538716_121551289_121551460_121593708_121593968_121596476
transcript_2814.known	chr1	-	2715	12	FSM	ENSG00000177000.13	ENST00000423400.7	2715	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	11.5943845057043	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTGAGCCTTGAGAGAA	-11802679	False	847	-45	True	NA	NA	NA	11803526	11790067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_11790899_11791206_11791327_11792277_11792380_11793906_11794090_11794357_11794539_11794728_11794864_11795097_11795349_11796205_11796400_11800211_11800323_11801160_11801400_11802880_11803127_11803404
transcript_28143.nic	chr10	-	2133	7	ISM	ENSG00000066468.24	ENST00000490349.5	1478	9	-413	2125	-27	-2125	5prime_fragment	FALSE	canonical	3	343	junction_5	61.928498196621	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGACCTTTGAAATCCAT	-121593432	True	NA	NA	False	AAAACA	-14	NA	121598485	121519458	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_121520170_121538591_121538716_121551289_121551460_121564501_121564580_121565437_121565705_121593708_121593968_121597961
transcript_2815.known	chr1	-	708	3	FSM	ENSG00000120937.9	ENST00000376468.4	708	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGAAACTGATTTGTC	NA	False	NA	NA	False	AATAAA	-20	NA	11858945	11857463	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_11857672_11858213_11858470_11858701
transcript_28154.nic	chr10	-	4075	4	ISM	ENSG00000066468.24	ENST00000336553.10	2593	16	-89	64528	-27	-10280	5prime_fragment	FALSE	canonical	3	114	junction_2	158.779371736032	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAAAAGCGGCAGAGGGC	-121593432	True	NA	NA	False	NA	NA	NA	121598485	121548245	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_121551460_121564501_121564580_121593708_121593968_121597961
transcript_28155.nic	chr10	-	1306	4	ISM	ENSG00000066468.24	ENST00000359354.6	1680	7	-187	26358	-27	0	5prime_fragment	FALSE	canonical	3	343	junction_2	48.2861838992849	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTCTCTATCGTTTGTCC	-121593432	True	NA	-8	True	AATAAA	-17	NA	121598485	121564323	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_121564580_121565437_121565705_121593708_121593968_121597961
transcript_28165.known	chr10	-	4895	12	FSM	ENSG00000107669.19	ENST00000369043.8	4895	12	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_5	46.3136985964839	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTCTTGGTGGTCATTA	-121924527	True	NA	-5	True	AATAAA	-17	NA	121928031	121740423	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_121743859_121790168_121790290_121836717_121836818_121841081_121841264_121870005_121870039_121898840_121898970_121902390_121902621_121910905_121911152_121913789_121913894_121922348_121922412_121924265_121924330_121927843
transcript_28166.known	chr10	-	4835	12	FSM	ENSG00000107669.19	ENST00000540606.7	5138	12	293	10	-5	-9	multi-exon	FALSE	canonical	3	18	junction_11	61.6728237563568	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTTTCTATCTGCAGT	NA	False	NA	-23	True	GATAAA	-19	NA	121928492	121740441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_121743859_121790168_121790290_121836717_121836818_121841081_121841264_121870005_121870039_121898840_121898970_121902390_121902621_121910905_121911152_121913789_121913894_121922348_121922412_121924265_121924330_121928346
transcript_28168.known	chr10	-	4886	12	FSM	ENSG00000107669.19	ENST00000224652.12	4895	12	-9	18	2	-9	multi-exon	FALSE	canonical	3	96	junction_5	45.9917347946507	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTTTCTATCTGCAGT	-121924536	True	NA	-23	True	GATAAA	-19	NA	121928040	121740441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_121743859_121790168_121790290_121836717_121836818_121841081_121841264_121870005_121870039_121899865_121899995_121902390_121902621_121910905_121911152_121913789_121913894_121922348_121922412_121924265_121924330_121927843
transcript_28184.nnic	chr10	-	1206	8	NNC	ENSG00000107669.19	novel	2161	8	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	78.2134703153844	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCCTCAGAAGCCCCTG	-121927763	False	NA	-9	True	AATAAA	-24	NA	121928055	121888998	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_121889157_121898840_121898970_121902390_121902621_121910905_121911152_121913789_121913894_121922348_121922412_121924265_121924330_121927843
transcript_28188.nnic	chr10	-	1270	4	NNC	ENSG00000107669.19	novel	5059	3	NA	NA	8	-2533	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	115.851437434136	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGTCCATTAGTTTTT	-121927763	False	NA	NA	False	ATTAAA	-45	NA	121928055	121920061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_121920993_121922348_121922412_121924265_121924330_121927843
transcript_28194.nic	chr10	-	1559	11	NIC	ENSG00000107672.15	novel	1391	11	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_10	216.519952891183	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTAGTTGCTCTTTAT	-121974794	False	NA	NA	False	ATTAAA	-26	NA	121974817	121957090	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_121957260_121959323_121959411_121959500_121959596_121960357_121960407_121961422_121961518_121963237_121963329_121965285_121965386_121967654_121967807_121970938_121971070_121974003_121974082_121974305
transcript_28195.nic	chr10	-	1475	11	NIC	ENSG00000107672.15	novel	1391	11	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_10	217.11215995425	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTAGTTGCTCTTTAT	-121974794	False	NA	NA	False	ATTAAA	-26	NA	121974817	121957090	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_121957260_121959323_121959411_121959500_121959596_121960357_121960407_121961422_121961518_121963237_121963329_121965285_121965386_121967654_121967807_121970938_121971070_121974003_121974082_121974389
transcript_28196.known	chr10	-	1391	11	FSM	ENSG00000107672.15	ENST00000369023.8	1391	11	0	0	0	0	multi-exon	FALSE	canonical	3	700	junction_5	37.6143589603758	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTAGTTGCTCTTTAT	-121965905	True	NA	NA	False	ATTAAA	-26	NA	121975217	121957090	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_121957260_121959323_121959411_121959500_121959596_121960357_121960407_121961422_121961518_121963237_121963329_121965285_121965386_121967654_121967807_121970938_121971070_121974003_121974082_121974873
transcript_28206.nic	chr10	+	3882	17	NIC	ENSG00000138162.19	novel	3685	17	NA	NA	-149	0	intron_retention	TRUE	canonical	2	2	junction_2	44.174679894143	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTGCCTCGAATTTAT	122112865	False	NA	NA	False	AATAAA	-43	NA	122112880	122254542	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_122113234_122132608_122132735_122143571_122143707_122195039_122195177_122210396_122211709_122215390_122215452_122216626_122216829_122224725_122224788_122226365_122226482_122227836_122228009_122237394_122237539_122237960_122238038_122241957_122242002_122248642_122248804_122249049_122249157_122249543_122249665_122253990
transcript_2821.nnic	chr1	-	2704	4	NNC	ENSG00000116685.16	novel	2819	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	267.426002226161	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACCGGTTTGTGTGTGGTT	-11925294	True	NA	-5	True	AATAAA	-18	NA	11926427	11919590	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_11920333_11922635_11923490_11925204_11926188_11926302
transcript_28211.known	chr10	+	3979	16	FSM	ENSG00000138162.19	ENST00000360561.7	3979	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	41.0262788411959	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGCCTCGAATTTATTTT	NA	False	NA	NA	False	AATAAA	-27	NA	122163425	122254545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_122163993_122195039_122195177_122210396_122211709_122215390_122215452_122216626_122216829_122224725_122224788_122226365_122226482_122227836_122228009_122229345_122229487_122237394_122237539_122237960_122238038_122241957_122242002_122248642_122248804_122249049_122249157_122249543_122249665_122253990
transcript_28213.nnic	chr10	+	3655	15	NIC	ENSG00000138162.19	novel	3685	17	NA	NA	-183	0	intron_retention	FALSE	canonical	1	4	junction_1	32.481784534268	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTGCCTCGAATTTAT	NA	False	NA	NA	False	AATAAA	-43	NA	122112846	122254542	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_122113234_122195039_122195177_122210396_122211709_122215390_122215452_122216626_122216829_122224725_122224788_122226365_122226482_122227836_122228009_122237394_122237539_122237960_122238038_122241957_122242002_122248642_122248804_122249049_122249157_122249543_122249665_122253990
transcript_28216.nic	chr10	+	3431	15	NIC	ENSG00000138162.19	novel	3979	16	NA	NA	70	-129	intron_retention	FALSE	canonical	3	69	junction_1	20.6387786381237	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACTAAGGAGACTATCAGA	122161936	True	NA	19	True	AATAAA	-20	NA	122163495	122254208	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_122163993_122195039_122195177_122210396_122211709_122215390_122215452_122216626_122216829_122224725_122224788_122226365_122226482_122227836_122228009_122237394_122237539_122237960_122238038_122241957_122242002_122248642_122248804_122249049_122249157_122249543_122249665_122253990
transcript_28217.nic	chr10	+	3826	15	NIC	ENSG00000138162.19	novel	3979	16	NA	NA	9	0	intron_retention	FALSE	canonical	3	69	junction_1	20.6387786381237	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTGCCTCGAATTTAT	NA	False	NA	NA	False	AATAAA	-43	NA	122163434	122254542	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_122163993_122195039_122195177_122210396_122211709_122215390_122215452_122216626_122216829_122224725_122224788_122226365_122226482_122227836_122228009_122237394_122237539_122237960_122238038_122241957_122242002_122248642_122248804_122249049_122249157_122249543_122249665_122253990
transcript_2822.nnic	chr1	-	2682	4	NNC	ENSG00000116685.16	novel	2819	3	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	267.426002226161	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACCGGTTTGTGTGTGGTT	-11925316	True	NA	-5	True	AATAAA	-18	NA	11926449	11919590	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_11920333_11922635_11923490_11925204_11926188_11926346
transcript_28228.nic	chr10	+	2403	3	ISM	ENSG00000138162.19	ENST00000369001.5	3685	17	-158	57579	-149	-13560	5prime_fragment	FALSE	canonical	3	6	junction_1	6	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAAACTATGCTTGGCCG	122112865	False	NA	NA	False	AAAACA	-11	NA	122112880	122196963	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_122113234_122132608_122132735_122195039
transcript_28231.nic	chr10	+	2428	2	ISM	ENSG00000138162.19	ENST00000368999.5	3879	18	-94	57513	70	-13553	5prime_fragment	FALSE	canonical	3	69	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGCTTGGCCGGGCATGG	122161936	True	NA	NA	False	AATAAA	-1	NA	122163495	122196970	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_122163993_122195039
transcript_28236.nnic	chr10	+	1738	14	NIC	ENSG00000107679.15	novel	3771	13	NA	NA	-74	-334	combination_of_known_splicesites	FALSE	canonical	3	43	junction_13	70.3413486183183	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAAAATATCTCAGTATCA	122370522	True	NA	NA	False	AATATA	-32	NA	122374621	122430145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_122374807_122392302_122392373_122393180_122393342_122397917_122397975_122400342_122400389_122406575_122406674_122412919_122413046_122415858_122416003_122417899_122417969_122424198_122424264_122424895_122424960_122426941_122427032_122428275_122428317_122429623
transcript_28246.nic	chr10	+	1596	13	NIC	ENSG00000107679.15	novel	3771	13	NA	NA	-2	-334	combination_of_known_junctions	FALSE	canonical	3	43	junction_12	71.401982154248	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAAAATATCTCAGTATCA	122370594	True	NA	NA	False	AATATA	-32	NA	122374693	122430145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_122374807_122393180_122393342_122397917_122397975_122400342_122400389_122406575_122406674_122412919_122413046_122415858_122416003_122417899_122417969_122424198_122424264_122424895_122424960_122426941_122427032_122428275_122428317_122429623
transcript_2825.nnic	chr1	-	2230	4	NNC	ENSG00000116685.16	novel	2170	4	NA	NA	0	118	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	267.426002226161	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTGAAATGGAACTCACT	-11925294	True	NA	-17	True	AATAAA	-19	NA	11926427	11920064	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_11920333_11922635_11923490_11925204_11926188_11926302
transcript_28252.nnic	chr10	+	1688	13	NIC	ENSG00000107679.15	novel	3741	12	NA	NA	-65	-334	combination_of_known_splicesites	FALSE	canonical	3	116	junction_1	50.9075278214223	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAAAATATCTCAGTATCA	122370531	True	NA	NA	False	AATATA	-32	NA	122374630	122430145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_122374807_122392302_122392373_122393180_122393342_122397917_122397975_122400342_122400389_122406575_122406674_122412919_122413046_122415858_122416003_122417899_122417969_122424198_122424264_122424895_122424960_122426941_122427032_122429623
transcript_28253.nnic	chr10	+	2049	13	NIC	ENSG00000107679.15	novel	3741	12	NA	NA	-5	87	combination_of_known_splicesites	FALSE	canonical	3	116	junction_1	50.9075278214223	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGAATTGAAACAACTGTG	122370591	True	NA	92	True	AAGAAA	-2	NA	122374690	122430566	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_122374807_122392302_122392373_122393180_122393342_122397917_122397975_122400342_122400389_122406575_122406674_122412919_122413046_122415858_122416003_122417899_122417969_122424198_122424264_122424895_122424960_122426941_122427032_122429623
transcript_28254.nnic	chr10	+	3991	13	NIC	ENSG00000107679.15	novel	3741	12	NA	NA	-159	0	combination_of_known_splicesites	FALSE	canonical	3	116	junction_1	50.9075278214223	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTCATTTTGTTTGGTT	NA	False	NA	12	True	AATAAA	-24	NA	122374536	122432354	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_122374807_122392302_122392373_122393180_122393342_122397917_122397975_122400342_122400389_122406575_122406674_122412919_122413046_122415858_122416003_122417899_122417969_122424198_122424264_122424895_122424960_122426941_122427032_122429623
transcript_28260.known	chr10	+	14010	12	FSM	ENSG00000107679.15	ENST00000368990.8	3741	12	-12	-10257	0	10248	multi-exon	FALSE	canonical	3	111	junction_1	48.3161078833109	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCATGACTCGACTTTG	122370596	True	NA	NA	False	AATAAA	-17	NA	122374695	122442602	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_122374807_122393180_122393342_122397917_122397975_122400342_122400389_122406575_122406674_122412919_122413046_122415858_122416003_122417899_122417969_122424198_122424264_122424895_122424960_122426941_122427032_122429623
transcript_28270.known	chr10	+	2091	9	FSM	ENSG00000166033.13	ENST00000368984.8	2091	9	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	9.77800465330223	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTAGTGCTTATTTT	122460903	True	NA	9	True	ATTAAA	-18	NA	122461552	122514907	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_122462125_122488901_122489002_122489421_122489627_122506690_122506886_122507369_122507403_122508655_122508771_122510095_122510154_122511969_122512066_122514190
transcript_28271.known	chr10	-	1958	9	FSM	ENSG00000138161.14	ENST00000392790.6	1958	9	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_7	5.55512151082224	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCACTGTGTCGGTGTGTT	-122845725	True	NA	-10	True	AATAAA	-36	NA	122845857	122832157	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_122832451_122833671_122833941_122834705_122835098_122836177_122836351_122836830_122837049_122837403_122837555_122839016_122839232_122841177_122841329_122845761
transcript_28272.known	chr10	-	704	4	FSM	ENSG00000213185.7	ENST00000368896.1	704	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	16.8193010820572	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCTCTTTGCTGCCAATA	-122879189	True	NA	NA	False	AATAAA	-18	NA	122879605	122849095	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_122849440_122850423_122850521_122855644_122855787_122879484
transcript_28273.known	chr10	-	728	4	FSM	ENSG00000213185.7	ENST00000368898.8	728	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	10.3387082795139	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTTGATTGTTGATTA	-122879165	True	NA	NA	False	AATAAA	-36	NA	122879581	122849077	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_122849440_122850423_122850551_122855644_122855787_122879484
transcript_28274.known	chr10	-	2991	6	FSM	ENSG00000119965.13	ENST00000368891.9	2991	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_5	32.7022934975515	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGTTTCACGTATTG	-122952871	True	NA	-3	True	AATAAA	-21	NA	122954311	122930902	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_122932662_122937704_122938160_122948648_122948856_122951953_122952027_122952828_122953029_122954014
transcript_28278.known	chr10	+	1705	7	FSM	ENSG00000179988.15	ENST00000368887.7	1705	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_6	15.1299922890485	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATGTCTCATTTTGGTA	NA	False	NA	16	True	ATTAAA	-17	NA	122980039	122990390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_122980696_122982732_122983025_122983271_122983471_122986299_122986376_122986868_122986963_122987333_122987505_122990173
transcript_28282.known	chr10	+	1173	6	FSM	ENSG00000179988.15	ENST00000406217.8	1173	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	9.45304183847718	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATGTCTCATTTTGGTA	122980086	True	NA	16	True	ATTAAA	-17	NA	122980400	122990390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_122980696_122982732_122983025_122983271_122983471_122986299_122986376_122986868_122986963_122990173
transcript_28285.known	chr10	+	696	5	FSM	ENSG00000179988.15	ENST00000483455.5	696	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	24.8243831746128	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATATTGTACAGAAGTAT	122980216	False	NA	-39	True	NA	NA	NA	122980530	122990335	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_122980696_122983271_122983471_122986299_122986376_122986868_122986963_122990173
transcript_28288.known	chr10	-	4532	5	FSM	ENSG00000095574.12	ENST00000368886.10	4532	5	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_3	7.54983443527075	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGGTTTTTCTTTTTTGG	-123007685	True	NA	-1	True	AATAAA	-21	NA	123008795	122990806	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_122994724_122995993_122996177_122998492_122998672_123007025_123007177_123008693
transcript_28296.known	chr10	+	5848	11	FSM	ENSG00000196177.13	ENST00000358776.7	5848	11	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_6	14.3443368616329	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTGGTACTCTTATAA	123007153	True	NA	13	True	AATAAA	-18	NA	123009005	123058290	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_123009072_123034355_123034516_123037746_123037848_123040465_123040673_123041208_123041380_123043045_123043172_123044392_123044486_123047208_123047299_123051048_123051187_123053060_123053161_123053694
transcript_28305.known	chr10	+	1614	2	FSM	ENSG00000188816.4	ENST00000339992.4	1614	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTAACTTTGGTGGGCT	123148014	True	NA	4	True	AATAAA	-15	NA	123148135	123150672	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_123148647_123149569
transcript_28312.known	chr10	+	7703	8	FSM	ENSG00000154473.18	ENST00000368865.9	7703	8	0	0	0	0	multi-exon	FALSE	canonical	3	1332	junction_7	487.877619315102	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAGCCTCATTTGTACC	123126533	True	NA	18	True	AATAAA	-13	NA	123154401	123170467	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_123154486_123154917_123155113_123155657_123155728_123157728_123157881_123160406_123160566_123162235_123162414_123162611_123162829_123163819
transcript_28315.known	chr10	+	1361	8	FSM	ENSG00000154473.18	ENST00000368858.9	1361	8	0	0	0	0	multi-exon	FALSE	canonical	3	1276	junction_7	507.078466737221	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGATGTTTTTGAATGT	123126546	True	NA	26	True	AATAAA	-21	NA	123154414	123165365	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_123154486_123154917_123155113_123155657_123155728_123157728_123157881_123160406_123160566_123162235_123162414_123162611_123162829_123165046
transcript_2832.known	chr1	-	2819	3	FSM	ENSG00000116685.16	ENST00000376572.8	2819	3	0	0	0	0	multi-exon	FALSE	canonical	3	520	junction_2	42.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACCGGTTTGTGTGTGGTT	-11925294	True	NA	-5	True	AATAAA	-18	NA	11926427	11919590	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_11920333_11922635_11923490_11925204
transcript_28322.nic	chr10	+	3607	7	ISM	ENSG00000154473.18	ENST00000368858.9	1361	8	-33	5	-20	-5	intron_retention	TRUE	canonical	3	2531	junction_6	107.332815733742	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAATGTTGGATGTTTTTG	123126513	True	NA	21	True	AATAAA	-16	NA	123154381	123165360	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_123154486_123154917_123155113_123155657_123155728_123157728_123157881_123160406_123160566_123162235_123162414_123162611
transcript_28326.known	chr10	-	3544	14	FSM	ENSG00000121898.13	ENST00000241305.4	3544	14	0	0	0	0	multi-exon	TRUE	canonical	2	10	junction_2	3.89355407225962	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGTGTGTGTGACTTT	-123891275	True	NA	-3	True	AATAAA	-16	NA	123891807	123745638	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_123747018_123754662_123754763_123757212_123757353_123761871_123762170_123766972_123767153_123768525_123768723_123770915_123771040_123780166_123780256_123797975_123798127_123799114_123799200_123842348_123842489_123862613_123862724_123880210_123880310_123891355
transcript_28330.known	chr10	-	4810	8	FSM	ENSG00000182022.18	ENST00000346248.7	4810	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	9.79379228628721	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTCCTGGTGCATGAGT	-124092415	False	NA	2	True	NA	NA	NA	124092454	124007667	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_124010340_124012332_124012481_124021255_124021413_124038514_124038672_124042300_124042448_124044579_124044920_124045666_124046725_124092323
transcript_28331.known	chr10	-	4809	8	FSM	ENSG00000182022.18	ENST00000435907.6	4809	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	6.60859057498307	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTCCTGGTGCATGAGT	-124093205	True	NA	2	True	NA	NA	NA	124093598	124007667	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_124010340_124012332_124012481_124021255_124021413_124038514_124038672_124042300_124042448_124044579_124044920_124045666_124046725_124093468
transcript_28341.known	chr10	-	3553	6	FSM	ENSG00000182022.18	ENST00000628426.1	3553	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	10.6770782520313	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATACTTGTTTAACGTAA	-124092375	False	393	-1	True	AATAAA	-20	NA	124092414	124019652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_124021413_124038514_124038672_124042300_124042448_124044579_124044920_124045666_124046725_124092323
transcript_28357.known	chr10	-	2039	10	FSM	ENSG00000065154.12	ENST00000368845.6	2039	10	0	0	0	0	multi-exon	FALSE	canonical	3	776	junction_4	39.3333333333333	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTGATGATTATTCA	-124395982	True	NA	-1	True	AATAAA	-19	NA	124418923	124397302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_124398103_124400839_124400985_124401725_124401840_124402926_124403056_124403797_124403921_124405435_124405564_124408541_124408638_124408740_124408966_124411972_124412201_124418872
transcript_28360.known	chr10	-	1864	9	FSM	ENSG00000065154.12	ENST00000539214.5	1864	9	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_8	265.713161839981	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTGATGATTATTCA	-124418966	False	NA	-1	True	AATAAA	-19	NA	124418976	124397302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_124398103_124400839_124400985_124401725_124401840_124402926_124403056_124403797_124403921_124405435_124405564_124408541_124408638_124408740_124408966_124418872
transcript_28363.known	chr10	-	3211	2	FSM	ENSG00000229544.9	ENST00000451024.5	3211	2	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTTTATTTCTTGTCT	-124445847	True	NA	-24	True	AATAAA	-17	NA	124450035	124445242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_124448148_124449729
transcript_28367.known	chr10	+	1634	7	FSM	ENSG00000107902.14	ENST00000368842.10	1634	7	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_6	86.0697391654001	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGACTCAGGCTTTGA	124458718	True	NA	4	True	AGTAAA	-18	NA	124461822	124614141	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_124461988_124484138_124484327_124488421_124488576_124496960_124497025_124498035_124498129_124517179_124517272_124613263
transcript_28369.known	chr10	+	840	6	FSM	ENSG00000107902.14	ENST00000392757.8	840	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_5	127.678659140829	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTGACTATTTTGGGA	124458729	True	NA	4	True	AATAAA	-22	NA	124461833	124498514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_124461988_124484138_124484327_124488421_124488576_124496960_124497025_124498035_124498129_124498327
transcript_28371.nnic	chr10	+	2543	6	NNC	ENSG00000107902.14	novel	840	6	NA	NA	-31	-6050	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	146.031503450454	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTCCTTGCTCTGCCT	124458687	True	NA	96	True	AATAAA	-22	NA	124461791	124511326	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_124461988_124484138_124484327_124488421_124488576_124496960_124497025_124498035_124498129_124509478
transcript_28374.known	chr10	+	1522	6	FSM	ENSG00000107902.14	ENST00000368839.1	1522	6	0	0	0	0	multi-exon	FALSE	canonical	2	49	junction_5	126.900591015172	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGACTCAGGCTTTGA	124458738	True	NA	4	True	AGTAAA	-18	NA	124461842	124614141	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_124461988_124484138_124484327_124488421_124488576_124496960_124497025_124498035_124498129_124613263
transcript_28380.known	chr10	-	5759	5	FSM	ENSG00000189319.14	ENST00000337318.8	5759	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	9.98436277385793	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCTGGTGCCAGCTGTGT	-124744058	True	NA	-4	True	AATAAA	-22	NA	124744378	124619291	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_124623605_124681606_124682380_124696157_124696213_124706635_124706888_124744012
transcript_28384.nnic	chr10	-	5484	3	NIC	ENSG00000189319.14	novel	5759	5	NA	NA	-32	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	23.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCTGGTGCCAGCTGTGT	NA	False	NA	-4	True	AATAAA	-22	NA	124744410	124619291	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_124623605_124681606_124682380_124744012
transcript_28388.known	chr10	-	3599	7	FSM	ENSG00000203791.15	ENST00000368836.7	3599	7	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	119.611523971007	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAAATTGTCCTTGAATG	-124788602	True	NA	NA	False	ACTAAA	-16	NA	124791887	124757833	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_124760504_124762299_124762559_124765391_124765609_124774674_124774783_124789042_124789158_124790272_124790339_124791723
transcript_28399.known	chr10	-	1013	6	FSM	ENSG00000203791.15	ENST00000464099.5	1013	6	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_3	147.614904396541	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGCTAAACAGTTAAAAACT	-124788583	True	NA	-22	True	ATTAAA	-15	NA	124791868	124760145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_124760504_124765391_124765609_124774674_124774783_124789038_124789158_124790272_124790339_124791723
transcript_28410.known	chr10	+	2955	9	FSM	ENSG00000165660.8	ENST00000298492.6	2955	9	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	11.2249721603218	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCATTGTTTTAATGTCT	124799782	True	NA	4	True	AATAAA	-18	NA	124801818	124836667	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_124801902_124806830_124806922_124816575_124816613_124819383_124819451_124826594_124826786_124828755_124828876_124829392_124829478_124831348_124831464_124834501
transcript_28413.nic	chr10	+	777	8	ISM	ENSG00000165660.8	ENST00000298492.6	2955	9	-17	5233	-17	-5233	5prime_fragment	FALSE	canonical	3	79	junction_2	11.7090580669978	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGGAAAAATGAAAAGGAAC	124799765	True	NA	NA	False	NA	NA	NA	124801801	124831434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_124801902_124806830_124806922_124816575_124816613_124819383_124819451_124826594_124826786_124828755_124828876_124829392_124829478_124831348
transcript_28426.nic	chr10	-	3282	12	NIC	ENSG00000175029.17	novel	6939	11	NA	NA	-558	252	combination_of_known_junctions	FALSE	canonical	3	101	junction_11	251.719311079321	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTAAGTTTCACAAGCTG	-125161620	False	NA	-12	True	AGTAAA	-32	NA	125161728	124988882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125110989_125111094_125160318_125160521_125160826
transcript_28437.known	chr10	-	1918	11	FSM	ENSG00000175029.17	ENST00000531469.5	1918	11	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_10	254.825057637588	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCCCTTGGGCACAGCA	-125158608	False	106	-27	True	AATAAA	-18	NA	125158716	124989224	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125110989_125111094_125158634
transcript_28439.known	chr10	-	6939	11	FSM	ENSG00000175029.17	ENST00000337195.9	6939	11	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_10	202.5755414654	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGCTTTCTGAAAGAGC	-125160405	False	NA	-2	True	AATAAA	-22	NA	125160513	124984316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125110989_125111094_125160318
transcript_28440.known	chr10	-	2036	11	FSM	ENSG00000175029.17	ENST00000411419.6	2036	11	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_10	240.290261974971	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCCCTTGGGCACAGCA	-125158445	True	NA	-27	True	AATAAA	-18	NA	125161026	124989224	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125110989_125111094_125160826
transcript_28457.known	chr10	-	2014	11	FSM	ENSG00000175029.17	ENST00000494626.6	2014	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_10	306.463064658696	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCCCTTGGGCACAGCA	-125160391	False	NA	-27	True	AATAAA	-18	NA	125160499	124989224	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125133511_125133613_125160318
transcript_28495.nnic	chr10	-	2863	10	NIC	ENSG00000175029.17	novel	2036	11	NA	NA	-5	801	combination_of_known_splicesites	FALSE	canonical	3	65	junction_9	238.141414569859	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTTCTGAAATTCAAGT	-125160958	False	NA	-35	True	AATAAA	-17	NA	125161066	124988333	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125160826
transcript_28507.nic	chr10	-	2328	10	NIC	ENSG00000175029.17	novel	6939	11	NA	NA	-59	252	combination_of_known_junctions	FALSE	canonical	3	173	junction_9	207.959932038201	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTAAGTTTCACAAGCTG	-125155312	True	NA	-12	True	AGTAAA	-32	NA	125160572	124988882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125160318
transcript_28508.nnic	chr10	-	2322	10	NIC	ENSG00000175029.17	novel	2036	11	NA	NA	-13	252	combination_of_known_splicesites	FALSE	canonical	3	65	junction_9	238.141414569859	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTAAGTTTCACAAGCTG	-125160966	False	NA	-12	True	AGTAAA	-32	NA	125161074	124988882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125160826
transcript_2852.known	chr1	+	2976	19	FSM	ENSG00000083444.17	ENST00000196061.5	2976	19	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_5	18.8243997166273	1285	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAGGGAAGATGCTCAGG	11929386	True	NA	26	True	ATTAAA	-15	NA	11934716	11975537	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11934856_11947975_11948068_11949772_11949907_11950356_11950521_11952622_11952736_11954829_11954894_11956916_11957015_11957841_11957944_11958515_11958648_11960645_11960768_11963531_11963637_11964174_11964301_11964643_11964786_11965479_11965594_11966250_11966317_11966986_11967092_11970669_11970817_11972871_11972998_11974652
transcript_28572.nic	chr10	+	3222	10	NIC	ENSG00000019995.6	novel	5695	9	NA	NA	-25269	2135	combination_of_known_splicesites	TRUE	canonical	3	50	junction_1	27.8691829450505	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGTTTTGGTTTTGGTTA	124915899	True	NA	18	True	AATACA	-23	NA	124916853	124985631	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_124917273_124942456_124943308_124966593_124966782_124971964_124972119_124973644_124973717_124974199_124974399_124981708_124981830_124983174_124983305_124983458_124983689_124984773
transcript_28573.nic	chr10	+	3593	10	NIC	ENSG00000019995.6	novel	5695	9	NA	NA	-25269	-2187	combination_of_known_splicesites	FALSE	canonical	3	50	junction_1	27.8691829450505	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGTGGCAAATGCATTGT	124915899	True	NA	4	True	AATAAA	-17	NA	124916853	124986002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_124917273_124942456_124943308_124966593_124966782_124971964_124972119_124973644_124973717_124974199_124974399_124981708_124981830_124983174_124983305_124983458_124983689_124984773
transcript_28574.nic	chr10	+	4055	10	NIC	ENSG00000019995.6	novel	5695	9	NA	NA	-25269	-1725	combination_of_known_splicesites	FALSE	canonical	3	50	junction_1	27.8691829450505	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCATGTCTTTAGTTCTT	124915899	True	NA	17	True	AATAGA	-16	NA	124916853	124986464	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_124917273_124942456_124943308_124966593_124966782_124971964_124972119_124973644_124973717_124974199_124974399_124981708_124981830_124983174_124983305_124983458_124983689_124984773
transcript_28579.known	chr10	+	555	2	FSM	ENSG00000249456.1	ENST00000508096.1	555	2	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTTTTCTGTTGATCCT	124916188	False	NA	NA	False	NA	NA	NA	124917142	124942881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_124917273_124942456
transcript_28580.known	chr10	+	4483	25	FSM	ENSG00000107938.18	ENST00000356792.9	4483	25	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_6	21.5512551194176	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTGTATTTTTCCAAT	125714726	True	NA	15	True	AATAAA	-19	NA	125719708	125764139	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_125719916_125721203_125721413_125723067_125723135_125723810_125723937_125725317_125725443_125725681_125725839_125729002_125729105_125729357_125729480_125730287_125730400_125733403_125733552_125733634_125733744_125734071_125734184_125735643_125735905_125737917_125737990_125738294_125738446_125740462_125740652_125741000_125741202_125743057_125743277_125745706_125745931_125747535_125747695_125747862_125748013_125749411_125749566_125752798_125752915_125753693_125753846_125763300
transcript_28582.known	chr10	+	4387	24	FSM	ENSG00000107938.18	ENST00000337623.7	4387	24	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_6	30.5933138228213	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTGTATTTTTCCAAT	125714720	True	NA	15	True	AATAAA	-19	NA	125719702	125764139	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_125719916_125721203_125721413_125723067_125723135_125723810_125723937_125725317_125725443_125725681_125725839_125729357_125729480_125730287_125730400_125733403_125733552_125733634_125733744_125734071_125734184_125735643_125735905_125737917_125737990_125738294_125738446_125740462_125740652_125741000_125741202_125743057_125743277_125745706_125745931_125747535_125747695_125747862_125748013_125749411_125749566_125752798_125752915_125753693_125753846_125763300
transcript_28585.nic	chr10	+	491	3	ISM	ENSG00000107938.18	ENST00000525091.5	4211	20	-1	25962	-1	-12615	5prime_fragment	FALSE	canonical	3	119	junction_2	4	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTTATTTGTCGCTT	125714718	True	NA	NA	False	NA	NA	NA	125719700	125723134	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_125719916_125721203_125721413_125723067
transcript_28586.known	chr10	-	718	3	FSM	ENSG00000224023.10	ENST00000528844.1	718	3	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGCTGCAATGAGTGTT	-125719449	True	NA	-10	True	NA	NA	NA	125719546	125707236	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_125707760_125709497_125709568_125719421
transcript_28587.known	chr10	+	4211	20	FSM	ENSG00000107938.18	ENST00000525091.5	4211	20	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_6	28.4278744249606	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCCAAGCAGTAGTGGCG	125714719	True	NA	NA	False	ATTAAA	-4	NA	125719701	125749096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_125719916_125721203_125721413_125723067_125723135_125723810_125723937_125725317_125725443_125725681_125725839_125729357_125729480_125730287_125730400_125733403_125733552_125733634_125733744_125734071_125734184_125735643_125735905_125737917_125737990_125738294_125738446_125740462_125740652_125741000_125741202_125743057_125743277_125745706_125745931_125747535_125747695_125747862
transcript_28596.nnic	chr10	-	1559	11	NNC	ENSG00000188690.15	novel	1336	10	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	144.631428119894	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTGAGTGTATGGTTGC	NA	False	NA	-13	True	AATAAA	-19	NA	125823304	125788585	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_125789006_125789186_125789364_125794879_125794979_125796102_125796189_125798064_125798146_125807412_125807488_125812213_125812289_125815033_125815131_125816176_125816261_125816436_125816526_125823028
transcript_28598.nic	chr10	-	1463	11	NIC	ENSG00000188690.15	novel	1695	13	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	135.55401137554	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTGAGTGTATGGTTGC	NA	False	NA	-13	True	AATAAA	-19	NA	125823304	125788585	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_125789006_125789282_125789364_125794879_125794979_125796102_125796189_125798064_125798146_125807412_125807488_125812213_125812289_125815033_125815131_125816176_125816261_125816436_125816526_125823028
transcript_28602.nic	chr10	-	1628	11	NIC	ENSG00000188690.15	novel	1695	13	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	136.773133326688	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTGAGTGTATGGTTGC	NA	False	NA	-13	True	AATAAA	-19	NA	125823304	125788585	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_125789006_125789282_125789529_125794879_125794979_125796102_125796189_125798064_125798146_125807412_125807488_125812213_125812289_125815033_125815131_125816176_125816261_125816436_125816526_125823028
transcript_28611.known	chr10	-	1336	10	FSM	ENSG00000188690.15	ENST00000368797.10	1336	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	104.462055252873	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTGAGTGTATGGTTGC	-125816821	True	NA	-13	True	AATAAA	-19	NA	125823258	125788585	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_125789006_125794879_125794979_125796102_125796189_125798064_125798146_125807412_125807488_125812213_125812289_125815033_125815131_125816176_125816261_125816436_125816526_125823028
transcript_28614.nic	chr10	-	1823	10	NIC	ENSG00000188690.15	novel	1472	11	NA	NA	-46	330	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	135.541802581025	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAGAGATAGGACCCATA	NA	False	NA	NA	False	CATAAA	-26	NA	125823304	125793527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_125794389_125794879_125794979_125796102_125796189_125798064_125798146_125807412_125807488_125812213_125812289_125815033_125815131_125816176_125816261_125816436_125816526_125823028
transcript_28628.known	chr10	-	1556	7	FSM	ENSG00000188690.15	ENST00000368778.7	1556	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	118.365253910653	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCTTGTGGGATTAAGT	-125816759	True	NA	-1	True	AATAAA	-20	NA	125823196	125802056	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_125803025_125807412_125807488_125812213_125812289_125815033_125815131_125816176_125816261_125816436_125816526_125823028
transcript_28633.nnic	chr10	-	3434	13	NNC	ENSG00000089876.12	novel	3050	11	NA	NA	-74	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_12	34.4612302288947	32	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCACTGAGTTTTCTGGT	-125894549	True	NA	NA	False	AATAAA	-20	NA	125896510	125836336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_125836856_125838205_125838388_125839000_125839189_125840846_125840997_125841742_125841935_125852292_125852452_125852542_125852643_125853960_125854204_125859602_125859976_125866989_125867184_125880542_125881072_125885364_125885677_125896217
transcript_28636.nic	chr10	-	3126	12	NIC	ENSG00000089876.12	novel	3050	11	NA	NA	-78	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_11	16.7074981929602	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCACTGAGTTTTCTGGT	-125894553	True	NA	NA	False	AATAAA	-20	NA	125896514	125836336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_125836856_125838205_125838388_125839000_125839189_125840846_125840997_125841742_125841935_125852292_125852452_125852542_125852643_125853960_125854204_125859602_125859976_125866989_125867184_125880542_125881072_125896217
transcript_28639.nic	chr10	-	2955	12	NIC	ENSG00000089876.12	novel	3050	11	NA	NA	-78	-171	combination_of_known_junctions	FALSE	canonical	3	88	junction_11	16.7074981929602	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTACTCCATGCTTTTCT	-125894553	True	NA	-2	True	AATAAA	-30	NA	125896514	125836507	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_125836856_125838205_125838388_125839000_125839189_125840846_125840997_125841742_125841935_125852292_125852452_125852542_125852643_125853960_125854204_125859602_125859976_125866989_125867184_125880542_125881072_125896217
transcript_28643.known	chr10	+	1433	8	FSM	ENSG00000107949.17	ENST00000368759.5	1433	8	0	0	0	0	multi-exon	FALSE	canonical	3	551	junction_7	509.475320345173	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTAGTAGTTGAGTCTT	125800836	True	NA	5	True	ATTAAA	-18	NA	125823545	125853695	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_125823723_125826590_125826666_125827557_125827639_125830561_125830652_125831419_125831608_125833771_125833947_125841254_125841331_125853124
transcript_28646.known	chr10	+	1234	7	FSM	ENSG00000107949.17	ENST00000278100.11	1234	7	0	0	0	0	multi-exon	FALSE	canonical	3	845	junction_6	341.857873326848	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACACAGTGTTATTTTCT	125800836	True	NA	5	True	AATAAA	-27	NA	125823545	125836551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_125823723_125826590_125826666_125827557_125827639_125830561_125830652_125831419_125831608_125833771_125833947_125836103
transcript_28647.known	chr10	+	2337	7	FSM	ENSG00000107949.17	ENST00000299130.7	2337	7	0	0	0	0	multi-exon	FALSE	canonical	3	644	junction_6	411.948891112586	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTCTCCATCTCTTTAT	125800836	True	NA	16	True	AATAAA	-20	NA	125823545	125842805	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_125823723_125826590_125826666_125827557_125827639_125830561_125830652_125831419_125831608_125833771_125833947_125841254
transcript_28651.nic	chr10	+	765	6	ISM	ENSG00000107949.17	ENST00000278100.11	1234	7	-24	2650	-24	2251	5prime_fragment	FALSE	canonical	3	1507	junction_1	144.950198344121	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCGTTAATGTTTGCAAA	125800812	True	NA	NA	False	AAAAAG	-22	NA	125823521	125833901	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_125823723_125826590_125826666_125827557_125827639_125830561_125830652_125831419_125831608_125833771
transcript_2866.nic	chr1	+	4481	20	NIC	ENSG00000116688.18	novel	4772	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_2	105.791201871194	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGTGAGATCTGTCTT	11970183	True	NA	7	True	AATAAA	-14	NA	11980434	12013505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_11980485_11981969_11982115_11982522_11982591_11989164_11989344_11992554_11992691_11996155_11996319_11997296_11997422_11998769_11998879_11998987_11999096_12001400_12001555_12001768_12001837_12001981_12002104_12003991_12004119_12004508_12004614_12004824_12004928_12005710_12005932_12006537_12006694_12007052_12007250_12009591_12009727_12011495
transcript_28664.known	chr10	+	1271	11	FSM	ENSG00000203780.12	ENST00000368693.6	1271	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.61801050302511	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGCGTATGTGGTACC	125896383	True	NA	7	True	AATACA	-14	NA	125896563	126009592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_125896656_125980160_125980339_125988550_125988676_125995416_125995499_125996549_125996625_125997419_125997486_126004883_126005050_126008406_126008551_126009053_126009132_126009221_126009267_126009372
transcript_28665.known	chr10	+	6797	52	FSM	ENSG00000150760.13	ENST00000280333.9	6797	52	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_40	19.4979074972283	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAGTGTCTGACCAATTA	126900731	True	NA	13	True	AATAAA	-18	NA	126905408	127452517	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_126905564_126970701_126970786_126977947_126977989_126981917_126981974_126987520_126987618_126990454_126990604_126996747_126996884_126998091_126998250_126999353_126999436_127000171_127000308_127008731_127008805_127012294_127012375_127018709_127018836_127023199_127023325_127024684_127024784_127026351_127026425_127031649_127031754_127032136_127032321_127037718_127037817_127042624_127042715_127043063_127043165_127052680_127052816_127061667_127061777_127106230_127106302_127110247_127110355_127125473_127125602_127127668_127127765_127248007_127248110_127257334_127257430_127339005_127339085_127343645_127343747_127354668_127354728_127362063_127362213_127373780_127373867_127374057_127374215_127380081_127380123_127381277_127381369_127384789_127384910_127403054_127403145_127404324_127404430_127409036_127409179_127409312_127409392_127410839_127410925_127415151_127415239_127418364_127418542_127419665_127419750_127425873_127426012_127433282_127433429_127439026_127439226_127444125_127444280_127447393_127447546_127451331
transcript_28669.nic	chr10	+	5239	49	ISM	ENSG00000150760.13	ENST00000280333.9	6797	52	-26	13384	-26	-13383	5prime_fragment	TRUE	canonical	3	114	junction_40	19.9101715350611	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAACAGCAAACATCAAGAG	126900705	True	NA	28	True	NA	NA	NA	126905382	127439133	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_126905564_126970701_126970786_126977947_126977989_126981917_126981974_126987520_126987618_126990454_126990604_126996747_126996884_126998091_126998250_126999353_126999436_127000171_127000308_127008731_127008805_127012294_127012375_127018709_127018836_127023199_127023325_127024684_127024784_127026351_127026425_127031649_127031754_127032136_127032321_127037718_127037817_127042624_127042715_127043063_127043165_127052680_127052816_127061667_127061777_127106230_127106302_127110247_127110355_127125473_127125602_127127668_127127765_127248007_127248110_127257334_127257430_127339005_127339085_127343645_127343747_127354668_127354728_127362063_127362213_127373780_127373867_127374057_127374215_127380081_127380123_127381277_127381369_127384789_127384910_127403054_127403145_127404324_127404430_127409036_127409179_127409312_127409392_127410839_127410925_127415151_127415239_127418364_127418542_127419665_127419750_127425873_127426012_127433282_127433429_127439026
transcript_2867.known	chr1	+	4766	20	FSM	ENSG00000116688.18	ENST00000675817.1	4766	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	108.065718181037	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATCCTTTGTGAGATCT	11980153	True	NA	2	True	AATAAA	-9	NA	11980208	12013500	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11980485_11981969_11982115_11989164_11989344_11992554_11992691_11996155_11996319_11997296_11997422_11998769_11998879_11998987_11999096_12001400_12001555_12001768_12001837_12001981_12002104_12003757_12003890_12003991_12004119_12004508_12004614_12004824_12004928_12005710_12005932_12006537_12006694_12007052_12007250_12009591_12009727_12011495
transcript_28679.nic	chr10	+	1009	10	ISM	ENSG00000150760.13	ENST00000280333.9	6797	52	-26	452321	-26	-127900	5prime_fragment	FALSE	canonical	3	143	junction_9	13.6607936793811	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGAAAATCAGTTTTGTC	126900705	True	NA	NA	False	NA	NA	NA	126905382	127000196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_126905564_126970701_126970786_126977947_126977989_126981917_126981974_126987520_126987618_126990454_126990604_126996747_126996884_126998091_126998250_126999353_126999436_127000171
transcript_28680.known	chr10	-	2435	1	FSM	ENSG00000279725.1	ENST00000623953.1	2435	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTGTGCCATGGATAT	-127736926	True	NA	NA	False	AATGAA	-43	NA	127736996	127734561	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_127734600_127737000
transcript_28681.known	chr10	+	5289	21	FSM	ENSG00000132334.17	ENST00000254667.8	5289	21	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	4.11430431543414	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTTTTTGTCTTTAA	127907030	True	NA	8	True	GATAAA	-19	NA	127907102	128085855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_127907310_127982273_127982297_128040874_128040991_128047389_128047490_128047763_128047838_128049529_128049667_128056122_128056214_128060938_128061016_128061678_128061716_128063082_128063181_128066074_128066195_128068122_128068287_128069691_128069828_128070300_128070451_128070807_128070902_128072137_128072215_128073336_128073472_128076602_128076729_128077616_128077784_128079559_128079696_128082831
transcript_28684.known	chr10	+	4957	18	FSM	ENSG00000132334.17	ENST00000306042.9	4957	18	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_11	3.10374257841716	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTTTTTGTCTTTAA	128047492	True	NA	8	True	GATAAA	-19	NA	128047569	128085855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_128047684_128047763_128047838_128049529_128049667_128056122_128056214_128060938_128061016_128061678_128061716_128063082_128063181_128066074_128066195_128068122_128068287_128069691_128069828_128070300_128070451_128070807_128070902_128072137_128072215_128073336_128073472_128076602_128076729_128077616_128077784_128079559_128079696_128082831
transcript_28688.nic	chr10	-	3287	13	ISM	ENSG00000148773.14	ENST00000368654.8	12716	15	-51	12359	-51	2502	5prime_fragment	FALSE	canonical	3	119	junction_11	33.7156203495584	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CGATGAAAAGATGAAAGCAA	-128121447	True	NA	22	True	ATTAAA	-7	NA	128126474	128109017	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_128109424_128110377_128110534_128111644_128111817_128111926_128112046_128112132_128112446_128113426_128113603_128114927_128116008_128116490_128116537_128119252_128119320_128122880_128122997_128123090_128123170_128125575_128125757_128126098
transcript_28689.nic	chr10	-	2207	12	ISM	ENSG00000148773.14	ENST00000368653.7	11417	14	-270	12359	-51	2502	5prime_fragment	FALSE	canonical	3	73	junction_6	43.5218193591511	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CGATGAAAAGATGAAAGCAA	-128121447	True	NA	22	True	ATTAAA	-7	NA	128126474	128109017	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_128109424_128110377_128110534_128111644_128111817_128111926_128112046_128112132_128112446_128113426_128113603_128116490_128116537_128119252_128119320_128122880_128122997_128123090_128123170_128125575_128125757_128126098
transcript_2869.known	chr1	+	4772	20	FSM	ENSG00000116688.18	ENST00000675231.1	4772	20	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	119.853534808508	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATCCTTTGTGAGATCT	11980187	True	NA	2	True	AATAAA	-9	NA	11980298	12013500	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11980485_11981809_11982115_11982522_11982591_11989164_11989344_11992554_11992691_11996155_11996319_11997296_11997422_11998769_11998879_11998987_11999096_12001400_12001555_12001768_12001837_12001981_12002104_12003991_12004119_12004508_12004614_12004824_12004928_12005710_12005932_12006537_12006694_12007052_12007250_12009591_12009727_12011495
transcript_28693.nic	chr10	-	1232	7	ISM	ENSG00000148773.14	ENST00000368654.8	12716	15	-51	18982	-51	-131	5prime_fragment	FALSE	canonical	3	119	junction_5	21.4760848904595	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCCTACAGTATTGTAGAA	-128121447	True	NA	NA	False	AAAAAG	-5	NA	128126474	128115640	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_128116008_128116490_128116537_128119252_128119320_128122880_128122997_128123090_128123170_128125575_128125757_128126098
transcript_28694.nic	chr10	-	1163	7	ISM	ENSG00000148773.14	ENST00000368654.8	12716	15	-51	19051	-51	-200	5prime_fragment	FALSE	canonical	3	119	junction_5	21.4760848904595	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCTCCCTTTTGGAAGC	-128121447	True	NA	NA	False	NA	NA	NA	128126474	128115709	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_128116008_128116490_128116537_128119252_128119320_128122880_128122997_128123090_128123170_128125575_128125757_128126098
transcript_28695.nic	chr10	-	754	5	ISM	ENSG00000148773.14	ENST00000368654.8	12716	15	3	22605	3	-3754	5prime_fragment	FALSE	canonical	3	119	junction_3	12.051970793194	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACGTGAACAGGTGATAGAA	-128121393	True	NA	NA	False	AAGAAA	-3	NA	128126420	128119263	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_-_128119320_128122880_128122997_128123090_128123170_128125575_128125757_128126098
transcript_28696.known	chr10	-	654	4	FSM	ENSG00000148773.14	ENST00000478293.1	654	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	57.9271573232759	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACGCTGTGGCAGAGCCT	-128121208	False	NA	NA	False	NA	NA	NA	128126235	128115509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_128116008_128116490_128116537_128119252_128119320_128126192
transcript_28698.known	chr10	+	4678	5	FSM	ENSG00000170430.10	ENST00000651593.1	4678	5	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_3	7.88986691902975	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACTTCACATCAGTTT	129464046	True	NA	NA	False	ATTAAA	-17	NA	129467240	129770983	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_129467297_129536240_129536378_129707894_129708044_129759201_129759342_129766787
transcript_28699.known	chr10	+	959	2	FSM	ENSG00000170430.10	ENST00000482547.1	959	2	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCACTCCTATGCTTGGT	129464067	True	NA	NA	False	AAGAAA	-8	NA	129467261	129537164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_129467297_129536240
transcript_28701.known	chr10	-	843	4	FSM	ENSG00000237489.5	ENST00000637128.2	843	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	6.18241233033047	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTAATCTTGGAGTGAA	-130110608	True	NA	-4	True	ATTAAA	-23	NA	130110830	130063895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_130064384_130079565_130079629_130079736_130079902_130110703
transcript_28705.known	chr10	+	3827	12	FSM	ENSG00000108010.12	ENST00000368644.5	3827	12	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_11	528.628820394865	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTTTGCCTTTTTTTG	130107019	True	NA	30	True	NA	NA	NA	130136398	130182881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_130136513_130145210_130145320_130159994_130160070_130160795_130160998_130166506_130166680_130166918_130166981_130169432_130169491_130171583_130171637_130174866_130174907_130174996_130175090_130179341_130179421_130180112
transcript_28709.known	chr10	+	1318	11	FSM	ENSG00000108010.12	ENST00000331244.10	1318	11	0	0	0	0	multi-exon	FALSE	canonical	3	1938	junction_4	133.421737359397	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTAAATCTCTTTTTCTTA	130107011	True	NA	13	True	ATTAAA	-25	NA	130136390	130179672	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_130136513_130145210_130145320_130159994_130160070_130160795_130160998_130166506_130166680_130166918_130166981_130169432_130169491_130171583_130171637_130174866_130174907_130174996_130175090_130179341
transcript_2871.known	chr1	+	4407	19	FSM	ENSG00000116688.18	ENST00000235329.10	4407	19	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	44.934520261277	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGAGATCTGTCTTTTT	11970192	True	NA	10	True	AATAAA	-17	NA	11980443	12013508	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11980485_11981969_11982115_11989164_11989344_11992554_11992691_11996155_11996319_11997296_11997422_11998769_11998879_11998987_11999096_12001400_12001555_12001768_12001837_12001981_12002104_12003991_12004119_12004508_12004614_12004824_12004928_12005710_12005932_12006537_12006694_12007052_12007250_12009591_12009727_12011495
transcript_28718.known	chr10	+	1921	13	FSM	ENSG00000108010.12	ENST00000481034.1	1921	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	740.663947639774	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGTGTGCACCTGTAGT	130107019	True	NA	NA	False	AATAAA	-15	NA	130136398	130184521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_130136513_130145210_130145320_130159994_130160070_130160795_130160998_130166506_130166680_130166918_130166981_130169432_130169491_130171583_130171637_130174866_130174907_130174996_130175090_130179341_130179421_130180112_130180322_130183867
transcript_28720.known	chr10	-	2618	12	FSM	ENSG00000176769.9	ENST00000368642.4	2618	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_7	4.13611387857357	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTATGTGTGACTAAG	-131311571	True	NA	-2	True	AATAAA	-14	NA	131311721	131092390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_131093319_131098305_131098425_131104264_131104355_131116798_131116935_131134378_131134449_131146505_131146661_131163121_131163211_131166796_131166886_131260258_131260445_131308210_131308392_131309152_131309300_131311293
transcript_28725.known	chr10	+	2058	10	FSM	ENSG00000175470.20	ENST00000616467.4	2058	10	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_3	121.923270750982	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGTCTTTTTATTTAAT	131898323	True	NA	28	True	AATAAA	-39	NA	131901030	131956555	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_131901156_131901237_131901331_131934457_131934556_131934893_131935007_131940030_131940197_131940581_131940695_131944094_131944146_131945294_131945460_131947529_131947792_131955683
transcript_28727.known	chr10	-	2861	6	FSM	ENSG00000176171.12	ENST00000368636.9	1542	6	-90	-1229	-46	1229	multi-exon	FALSE	canonical	3	2425	junction_1	204.269821559622	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGCGTATCTGAATG	-131981990	False	NA	NA	False	ATTAAA	-17	NA	131982013	131966454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_131968570_131970637_131970788_131970863_131970971_131973033_131973119_131973792_131973944_131981760
transcript_28736.known	chr10	-	752	2	FSM	ENSG00000176171.12	ENST00000631806.1	752	2	0	0	0	0	multi-exon	FALSE	canonical	3	2480	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCAGACCGTGAAGGCGG	-131976901	True	NA	NA	False	NA	NA	NA	131981965	131973396	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_131973944_131981760
transcript_28738.nic	chr10	+	2974	15	NIC	ENSG00000151640.13	novel	2664	14	NA	NA	-72	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	24.1370449470417	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCTGTGCATGGAAGGA	NA	False	NA	24	True	ATTAAA	-17	NA	132186875	132205759	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_132187103_132190746_132190836_132192282_132192521_132192657_132192843_132194844_132195010_132196860_132196923_132197020_132197102_132198414_132198484_132198850_132198972_132200355_132200513_132200841_132200984_132201945_132202117_132202645_132202826_132203761_132203928_132204838
transcript_2874.known	chr1	+	4555	19	FSM	ENSG00000116688.18	ENST00000675053.1	4555	19	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	78.6701191960517	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATCCTTTGTGAGATCT	11980162	True	NA	2	True	AATAAA	-9	NA	11980190	12013500	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11980485_11982066_11982115_11989164_11989344_11992554_11992691_11996155_11996319_11997296_11997422_11998769_11998879_11998987_11999096_12001400_12001555_12001768_12001837_12001981_12002104_12003991_12004119_12004508_12004614_12004824_12004928_12005710_12005932_12006537_12006694_12007052_12007250_12009591_12009727_12011495
transcript_28740.nic	chr10	+	2888	15	NIC	ENSG00000151640.13	novel	2664	14	NA	NA	-72	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_2	24.3264364468798	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCTGTGCATGGAAGGA	NA	False	NA	24	True	ATTAAA	-17	NA	132186875	132205759	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_132187103_132190746_132190836_132192368_132192521_132192657_132192843_132194844_132195010_132196860_132196923_132197020_132197102_132198414_132198484_132198850_132198972_132200355_132200513_132200841_132200984_132201945_132202117_132202645_132202826_132203761_132203928_132204838
transcript_28745.known	chr10	+	2664	14	FSM	ENSG00000151640.13	ENST00000338492.9	2664	14	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	10.3059700053648	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCTGTGCATGGAAGGA	132186527	True	NA	24	True	ATTAAA	-17	NA	132186947	132205759	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_132187103_132190746_132190836_132192657_132192843_132194844_132195010_132196860_132196923_132197020_132197102_132198414_132198484_132198850_132198972_132200355_132200513_132200841_132200984_132201945_132202117_132202645_132202826_132203761_132203928_132204838
transcript_28750.nic	chr10	+	2556	13	NIC	ENSG00000151640.13	novel	2664	14	NA	NA	-72	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_11	20.8919176291269	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCTGTGCATGGAAGGA	NA	False	NA	24	True	ATTAAA	-17	NA	132186875	132205759	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_+_132187103_132190746_132190836_132192657_132192843_132194844_132195010_132196860_132196923_132197020_132197102_132198414_132198484_132198850_132198972_132200355_132200513_132200841_132200984_132201945_132202117_132203761_132203928_132204838
transcript_28762.known	chr10	-	1866	13	FSM	ENSG00000165752.17	ENST00000462160.5	1866	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	19.9164923283862	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGTTGCATGTTCTGCGT	-132248972	True	NA	-11	True	NA	NA	NA	132249108	132207491	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_132208152_132209033_132209102_132209294_132209365_132222640_132222773_132222860_132222987_132224406_132224524_132225232_132225337_132225526_132225617_132225746_132225785_132226794_132226969_132227976_132228129_132245899_132245956_132249029
transcript_28768.nic	chr10	-	1796	12	NIC	ENSG00000165752.17	novel	1866	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_11	13.4453285383486	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGTTGCATGTTCTGCGT	-132248972	True	NA	-11	True	NA	NA	NA	132249108	132207491	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_132208152_132209033_132209102_132222640_132222773_132222860_132222987_132224406_132224524_132225232_132225337_132225526_132225617_132225746_132225785_132226794_132226969_132227976_132228129_132245899_132245956_132249029
transcript_28769.known	chr10	-	2096	12	FSM	ENSG00000165752.17	ENST00000298630.8	2096	12	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_11	7.44456094093572	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGTTGCATGTTCTGCGT	-132307669	True	NA	-11	True	NA	NA	NA	132307950	132207491	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_132208152_132209033_132209102_132222640_132222773_132222860_132222987_132224406_132224524_132225232_132225337_132225526_132225617_132225746_132225785_132226794_132226969_132227976_132228129_132245899_132245956_132307571
transcript_28776.known	chr10	-	733	2	FSM	ENSG00000165752.17	ENST00000368619.3	733	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTAAGAGATTAATGCTGC	-132329968	True	NA	NA	False	NA	NA	NA	132331831	132324036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_132324374_132331435
transcript_28778.known	chr10	-	607	2	FSM	ENSG00000165752.17	ENST00000456004.1	607	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTCTTGCTTGTTATTG	-132329974	True	NA	1	True	AATAAA	-25	NA	132331837	132330280	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_132330486_132331435
transcript_28779.nnic	chr10	-	640	2	NNC	ENSG00000165752.17	novel	607	2	NA	NA	-79	-10	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	0	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGCGTATTCCCTCTTG	-132331909	False	NA	-9	True	AATAAA	-15	NA	132331926	132330290	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_-_132330486_132331481
transcript_2878.known	chr1	+	4514	18	FSM	ENSG00000116688.18	ENST00000674817.1	4514	18	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	68.1614712221615	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGTGAGATCTGTCTT	11980160	True	NA	7	True	AATAAA	-14	NA	11980188	12013505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_11980485_11989164_11989344_11992554_11992691_11996155_11996319_11997296_11997422_11998769_11998879_11998987_11999096_12001400_12001555_12001768_12001837_12001981_12002104_12003991_12004119_12004508_12004614_12004824_12004928_12005710_12005932_12006537_12006694_12007052_12007250_12009591_12009727_12011495
transcript_28780.known	chr10	+	7971	11	FSM	ENSG00000148814.18	ENST00000368614.8	7971	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_10	6.9778220097678	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATATCCTATTCTGTCCT	132331918	True	NA	NA	False	AATAAA	-17	NA	132332192	132381508	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_132332257_132333476_132333735_132337564_132337696_132342212_132342272_132344497_132344651_132347983_132348357_132351606_132351754_132355789_132355887_132361456_132361576_132365423_132365551_132375065
transcript_28783.known	chr10	+	1809	9	FSM	ENSG00000148814.18	ENST00000344079.9	1809	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	7.14142842854285	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCGTTGTGTGTGTGCTG	132331879	True	NA	1	True	AATAAA	-14	NA	132332153	132353395	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_132332257_132333476_132333735_132337564_132337696_132342212_132342272_132344497_132344651_132347983_132348357_132348962_132349058_132351606_132351754_132352905
transcript_28794.known	chr10	+	2013	3	FSM	ENSG00000171813.14	ENST00000631148.2	2013	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	13	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGCTTCAGAAAAACCCAAT	132397024	True	NA	NA	False	NA	NA	NA	132397167	132417528	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_132397352_132404625_132405987_132417060
transcript_28795.known	chr10	+	2615	3	FSM	ENSG00000171813.14	ENST00000305233.6	2615	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATCTGCTCTTTCTTTGT	132397056	True	NA	72	True	AATAAA	-18	NA	132397199	132417859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_132397352_132404625_132406290_132417060
transcript_28798.nnic	chr10	+	1168	3	NNC	ENSG00000171813.14	novel	2013	3	NA	NA	11375	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATCTGCTCTTTCTTTGT	132408539	True	NA	72	True	AATAAA	-18	NA	132408574	132417859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_132408826_132409761_132409880_132417060
transcript_28805.known	chr10	-	1156	6	FSM	ENSG00000171811.14	ENST00000475340.1	1156	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	2.33238075793812	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAACCTCTACCGAATTG	-132942146	True	NA	-10	True	AATAAA	-15	NA	132942543	132937114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_132937676_132938588_132938754_132940995_132941061_132941590_132941723_132941979_132942105_132942435
transcript_28807.known	chr10	+	7021	30	FSM	ENSG00000171798.19	ENST00000304613.8	7021	30	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_12	7.0910504463597	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTGTGTGGTCACTCT	133159596	True	NA	6	True	AATAAA	-16	NA	133160218	133226412	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_133160570_133167380_133167580_133168253_133168313_133183343_133183491_133183871_133183990_133185973_133186675_133188538_133188654_133189597_133189670_133189751_133189814_133195662_133195822_133197057_133197136_133197674_133197769_133198336_133198500_133198577_133199267_133199457_133199603_133200374_133200461_133201500_133201899_133206684_133206779_133206855_133206954_133207136_133207352_133210610_133210725_133211421_133211570_133211678_133211859_133212715_133212923_133213644_133213728_133213971_133214123_133218830_133218954_133219030_133219091_133219954_133220113_133224658
transcript_28809.nic	chr10	+	1715	6	ISM	ENSG00000171798.19	ENST00000368571.3	6200	17	-249	17897	0	-1839	5prime_fragment	FALSE	canonical	3	33	junction_5	9.44457516249408	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTGCCCCGTTTCTGAA	133159596	True	NA	12	True	ATTAAA	-12	NA	133160218	133186814	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr10_+_133160570_133167380_133167580_133168253_133168313_133183343_133183491_133183871_133183990_133185973
transcript_28810.known	chr10	+	2310	4	FSM	ENSG00000171798.19	ENST00000683144.1	2310	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	24.2395452835971	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCCTAAGAGCGTTTGCT	133160313	True	NA	-69	True	AAAAAG	-8	NA	133160432	133170541	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_133160570_133167380_133167580_133168253_133168313_133168626
transcript_28811.known	chr10	+	2370	4	FSM	ENSG00000171798.19	ENST00000682765.1	2370	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	24.6891789161883	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGATTTAGAGGAAAAATT	133159800	False	NA	-33	True	NA	NA	NA	133160422	133180799	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_133160570_133167380_133167580_133168253_133168313_133178834
transcript_28812.known	chr10	+	1966	4	FSM	ENSG00000171798.19	ENST00000683259.1	1966	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	21.1187120819429	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGCTTGGTCTCATTCA	133160321	True	NA	8	True	ATTAAA	-19	NA	133160440	133180840	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_133160570_133167380_133167580_133168253_133168313_133179261
transcript_28813.known	chr10	+	6659	3	FSM	ENSG00000171798.19	ENST00000684739.1	6659	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	9	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATAGATTATTGATGATGG	133159789	False	NA	NA	False	AATAAA	-17	NA	133160411	133174555	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_133160570_133167380_133167580_133168253
transcript_28817.known	chr10	+	1214	2	FSM	ENSG00000171794.4	ENST00000304477.3	1214	2	0	0	0	0	multi-exon	FALSE	canonical	3	1217	junction_1	0	431	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCGGGCTGTGTAGGAGTG	133218202	True	NA	25	True	AATAAA	-18	NA	133230216	133231558	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_133230839_133230966
transcript_28818.known	chr10	+	2459	3	FSM	ENSG00000151650.8	ENST00000325980.10	2459	3	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	26	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCCCGTGGAGATTGCTTT	133236232	True	NA	17	True	GATAAA	-18	NA	133237854	133241928	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_133238156_133239675_133239837_133239931
transcript_28820.known	chr10	-	3259	23	FSM	ENSG00000151651.16	ENST00000445355.8	3259	23	0	0	0	0	multi-exon	TRUE	canonical	2	10	junction_12	4.42289311097096	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTAGATTCTTGTTAGA	-133276570	True	NA	-6	True	AATAAA	-13	NA	133276868	133262422	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_133263234_133263687_133263766_133267351_133267418_133267928_133268119_133268747_133268863_133269444_133269530_133269896_133269975_133270359_133270511_133270735_133270806_133270880_133271071_133271199_133271290_133271527_133271706_133271805_133271955_133272192_133272275_133272415_133272586_133272797_133272867_133272956_133273020_133273253_133273444_133273761_133273839_133273950_133274030_133274158_133274236_133275483_133275588_133276771
transcript_28849.known	chr10	-	3927	18	FSM	ENSG00000130640.15	ENST00000684487.1	3927	18	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_8	58.7027583749729	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAGCCACAAACCGCTTC	-133308945	False	NA	-79	True	GGGGCT	-45	NA	133308977	133278710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_133279902_133281272_133281437_133282222_133282343_133283077_133283222_133283881_133284003_133285084_133285214_133285455_133285629_133288128_133288279_133288839_133289021_133289823_133289970_133292498_133292689_133293038_133293239_133293561_133293770_133297951_133298112_133299426_133299604_133299984_133300114_133302791_133302981_133308822
transcript_28856.known	chr10	-	3896	18	FSM	ENSG00000130640.15	ENST00000682905.1	3896	18	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_16	60.0707771707358	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCAGGTCTGGCCTGTGA	-133306286	True	NA	-43	True	NA	NA	NA	133308846	133278674	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_133279902_133281272_133281437_133282222_133282343_133283077_133283222_133283881_133284003_133285084_133285214_133285455_133285629_133288128_133288310_133288839_133289021_133289823_133289970_133292498_133292689_133293038_133293239_133293561_133293770_133297951_133298112_133299426_133299604_133299984_133300114_133302758_133302981_133308822
transcript_28857.known	chr10	-	3838	18	FSM	ENSG00000130640.15	ENST00000682515.1	3838	18	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_17	59.1807389409062	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCAGGTCTGGCCTGTGA	-133306290	True	NA	-43	True	NA	NA	NA	133308850	133278674	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_133279902_133281272_133281437_133282222_133282343_133283077_133283222_133283881_133284003_133285084_133285214_133285455_133285629_133288128_133288310_133288839_133289021_133289823_133289970_133292498_133292689_133293038_133293239_133293561_133293770_133297951_133298112_133299426_133299604_133299984_133300114_133302791_133302952_133308822
transcript_28858.known	chr10	-	3876	18	FSM	ENSG00000130640.15	ENST00000683786.1	3876	18	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_16	60.2665934306646	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCAGGTCTGGCCTGTGA	-133306312	True	NA	-43	True	NA	NA	NA	133308872	133278674	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_133279902_133281272_133281437_133282222_133282343_133283077_133283222_133283881_133284003_133285084_133285214_133285455_133285629_133288128_133288310_133288839_133289021_133289823_133289970_133292498_133292689_133293038_133293239_133293561_133293770_133297951_133298112_133299426_133299604_133299984_133300101_133302791_133302981_133308822
transcript_28865.known	chr10	-	4027	17	FSM	ENSG00000130640.15	ENST00000682161.1	4027	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	62.3660752633192	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAGCCACAAACCGCTTC	-133308945	False	NA	-79	True	GGGGCT	-45	NA	133308977	133278710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_133279902_133281272_133281437_133282222_133282343_133283077_133283222_133283881_133284003_133285084_133285456_133288128_133288310_133288839_133289021_133289823_133289970_133292498_133292689_133293038_133293239_133293561_133293770_133297951_133298112_133299426_133299604_133299984_133300114_133302791_133302981_133308822
transcript_28866.known	chr10	-	3253	17	FSM	ENSG00000130640.15	ENST00000683060.1	3253	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	61.367743970265	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCTGAGGACTCACCCG	-133308945	False	NA	NA	False	NA	NA	NA	133308977	133279286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_133279902_133281272_133281437_133282222_133282343_133283077_133283222_133283881_133284003_133285455_133285629_133288128_133288310_133288839_133289021_133289823_133289970_133292498_133292689_133293038_133293239_133293561_133293770_133297951_133298112_133299426_133299604_133299984_133300114_133302791_133302981_133308822
transcript_28869.known	chr10	-	3262	17	FSM	ENSG00000130640.15	ENST00000683383.1	3262	17	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	57.3955573193605	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCTGAGGACTCACCCG	-133308945	False	NA	NA	False	NA	NA	NA	133308977	133279286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_133279902_133281272_133281437_133283077_133283222_133283881_133284003_133285084_133285214_133285455_133285629_133288128_133288310_133288839_133289021_133289823_133289970_133292498_133292689_133293038_133293239_133293561_133293770_133297951_133298112_133299426_133299604_133299984_133300114_133302791_133302981_133308822
transcript_28878.nnic	chr10	+	1066	6	NNC	ENSG00000198546.15	novel	1084	6	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_4	214.216152518899	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTTGAGTCTTCATTTC	133304014	True	NA	14	True	TTTAAA	-27	NA	133308872	133313161	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_133309097_133309389_133309464_133309775_133309978_133310163_133310230_133311715_133311842_133312787
transcript_28879.nnic	chr10	+	1100	6	NNC	ENSG00000198546.15	novel	1084	6	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_5	190.659277246086	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTTGAGTCTTCATTTC	133304014	True	NA	14	True	TTTAAA	-27	NA	133308872	133313161	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr10_+_133309097_133309389_133309464_133309775_133309978_133310163_133310289_133311715_133311817_133312787
transcript_28880.known	chr10	+	1084	6	FSM	ENSG00000198546.15	ENST00000361518.10	1084	6	0	0	0	0	multi-exon	FALSE	canonical	3	504	junction_5	30.0492928369371	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTTGAGTCTTCATTTC	133304055	True	NA	14	True	TTTAAA	-27	NA	133308913	133313161	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_133309097_133309389_133309464_133309775_133309978_133310163_133310289_133311715_133311842_133312787
transcript_28883.known	chr10	+	2004	5	FSM	ENSG00000198546.15	ENST00000359035.4	2004	5	0	0	0	0	multi-exon	FALSE	canonical	3	516	junction_4	24.45914961727	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTGAGTCTTCATTTCT	133304082	True	NA	15	True	TTTAAA	-28	NA	133308940	133313162	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_133309097_133309389_133309464_133309775_133309978_133310163_133310289_133311715
transcript_28886.known	chr10	-	2163	5	FSM	ENSG00000130640.15	ENST00000683031.1	2163	5	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_4	14.4308696896618	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGTAATCCCAGCACTTA	-133309102	False	NA	NA	False	AATGAA	-44	NA	133309134	133296755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_133298112_133299426_133299604_133299984_133300114_133302791_133302981_133308822
transcript_28887.known	chr10	+	807	4	FSM	ENSG00000198546.15	ENST00000482153.1	807	4	0	0	0	0	multi-exon	FALSE	canonical	3	560	junction_1	10.2089285540757	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCGGGCGCAGCGCCTCCG	133304090	True	NA	NA	False	NA	NA	NA	133308948	133310546	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_133309097_133309389_133309464_133309775_133309978_133310163
transcript_28894.known	chr10	-	1306	2	FSM	ENSG00000130640.15	ENST00000480198.1	1306	2	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGGGACTGGTATTAACC	-133306288	True	NA	NA	False	NA	NA	NA	133308848	133301700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_133302981_133308822
transcript_28895.known	chr10	-	655	2	FSM	ENSG00000130643.9	ENST00000467611.1	655	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGAGGCTTCCATCTCTCC	NA	False	NA	-4	True	AGTAAA	-14	NA	133326314	133325427	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_133325567_133325798
transcript_28896.known	chr10	-	2749	17	FSM	ENSG00000130640.15	ENST00000417178.7	2749	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	62.184076538934	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTTTCTCAAGGCGCT	-133306318	True	NA	-2	True	TATAAA	-23	NA	133308878	133279631	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_133279902_133281272_133281437_133282222_133282343_133283077_133283222_133283881_133284003_133285084_133285214_133285455_133285629_133288128_133288310_133288839_133289021_133289823_133289970_133292498_133292689_133293038_133293239_133293561_133293770_133297951_133298112_133299426_133299604_133299984_133300114_133308822
transcript_28897.known	chr10	-	762	6	FSM	ENSG00000148803.12	ENST00000368552.7	762	6	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	79.0797066256571	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCCAGCTCTGTTCTCAC	-133355065	True	NA	-24	True	NA	NA	NA	133358025	133355159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_133355506_133355737_133355812_133356639_133356739_133356942_133357014_133357186_133357256_133357922
transcript_28899.known	chr10	-	628	6	FSM	ENSG00000148803.12	ENST00000368551.1	628	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	87.5844735098636	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTTGTGAAAATGATGGA	-133357605	False	NA	-67	True	NA	NA	NA	133357737	133355202	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_133355437_133355737_133355812_133356639_133356739_133356942_133357014_133357186_133357256_133357656
transcript_28900.known	chr10	-	689	6	FSM	ENSG00000148803.12	ENST00000278025.9	689	6	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	28.6635657237546	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGCTCTGTTCTCACGC	-133355059	True	NA	-22	True	NA	NA	NA	133358019	133355157	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_133355437_133355737_133355812_133356639_133356739_133356942_133357014_133357186_133357256_133357922
transcript_2891.known	chr1	+	1541	10	FSM	ENSG00000116691.11	ENST00000235332.6	1541	10	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_2	84.4261676127596	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCACGTGTGCTGGTTCC	12010930	True	NA	31	True	AATAAA	-22	NA	12019497	12032045	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_12019553_12021644_12021841_12022094_12022443_12022832_12022918_12029032_12029142_12029222_12029282_12029764_12029895_12030027_12030125_12031265_12031404_12031721
transcript_28911.nic	chr10	-	3036	4	NIC	ENSG00000148803.12	novel	762	6	NA	NA	-19	1193	intron_retention	FALSE	canonical	3	218	junction_3	25.4689353265241	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACAAACACCAGCTTGGG	-133357912	False	NA	NA	False	AATAAA	-30	NA	133358044	133353964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr10_-_133356739_133356942_133357014_133357186_133357256_133357922
transcript_28921.known	chr10	-	1277	8	FSM	ENSG00000127884.5	ENST00000368547.4	1277	8	0	0	0	0	multi-exon	FALSE	canonical	3	1857	junction_2	109.924278204478	929	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCACGCCTTGTAGTCATG	-133356964	True	NA	-46	True	ATTAAA	-20	NA	133373354	133362484	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_-_133362934_133364657_133364726_133365975_133366096_133366888_133366994_133368922_133369023_133369903_133370032_133370559_133370758_133373245
transcript_28943.known	chr10	+	1283	11	FSM	ENSG00000148824.19	ENST00000477902.6	1283	11	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	134.881281132706	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATAACCTGTAACCTTTAA	133380231	True	NA	NA	False	NA	NA	NA	133394093	133420464	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_133394185_133395712_133395778_133396162_133396268_133398434_133398516_133399169_133399227_133399528_133399620_133401528_133401591_133402148_133402246_133402691_133402774_133419479_133419593_133420025
transcript_28948.known	chr10	+	3424	11	FSM	ENSG00000148824.19	ENST00000317502.11	3424	11	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_7	55.9396102953891	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTGGAGCAAAGTGGGT	133380294	True	NA	4	True	NA	NA	NA	133394156	133422520	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_133394333_133395712_133395778_133396162_133396268_133398434_133398516_133399169_133399227_133399528_133399620_133401528_133401591_133402148_133402246_133402691_133402774_133419479_133419593_133420025
transcript_28959.known	chr10	+	2730	10	FSM	ENSG00000148824.19	ENST00000460848.5	2730	10	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_6	39.8859485143439	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTGCAGATCACGAAGTG	133380333	True	NA	-11	True	NA	NA	NA	133394195	133421307	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_133394333_133395712_133395778_133396162_133396268_133398434_133398516_133399169_133399227_133399528_133399620_133401528_133402246_133402691_133402774_133419479_133419593_133420025
transcript_28973.known	chr10	+	953	9	FSM	ENSG00000148824.19	ENST00000432508.3	953	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	159.336465929805	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGGTTGAGGCTCAAGAC	133380311	True	NA	NA	False	NA	NA	NA	133394173	133420219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_133394333_133395712_133395778_133396162_133396268_133398434_133398516_133399169_133399227_133402148_133402246_133402691_133402774_133419479_133419593_133420025
transcript_28980.known	chr10	+	1830	7	FSM	ENSG00000148832.16	ENST00000278060.10	1830	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	4.24264068711928	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCAGAGCCATCTTTCC	133378952	True	NA	5	True	CATAAA	-17	NA	133379261	133391694	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_133379498_133379998_133380486_133381459_133381660_133383959_133384213_133388955_133389069_133389589_133389748_133391311
transcript_28987.known	chr10	+	1633	6	FSM	ENSG00000148832.16	ENST00000357296.7	1633	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	8.59302042357633	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACGGAGATGCTGGACACA	133378951	True	NA	-35	True	NA	NA	NA	133379260	133391654	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_133379498_133379998_133380486_133381459_133381660_133383959_133384213_133388955_133389069_133391311
transcript_28990.known	chr10	+	693	6	FSM	ENSG00000148824.19	ENST00000498790.5	693	6	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_2	35.9421757827764	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTCGTTCTGTGAATTTC	133380361	True	NA	-68	True	NA	NA	NA	133394223	133399804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_133394333_133395712_133395778_133396162_133396268_133398434_133398516_133399169_133399227_133399528
transcript_28994.known	chr10	+	1324	5	FSM	ENSG00000148832.16	ENST00000480071.2	1324	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	11.2998893799895	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGTTGACTTGAGCTGAGA	133378977	True	NA	-65	True	NA	NA	NA	133379286	133391624	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr10_+_133379498_133379998_133380486_133381459_133381660_133388955_133389069_133391311
transcript_29.known	ERCC-00074	+	506	1	FSM	ERCC-00074A	DQ516754	506	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14222	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00074_+_0_500
transcript_29009.known	chr11	-	2819	4	FSM	ENSG00000177951.18	ENST00000382762.8	2792	4	-29	2	-29	-2	multi-exon	FALSE	canonical	3	180	junction_1	6.64997911442	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATATGGTCTCTGTCGT	-207316	False	NA	-4	True	AATAAA	-33	NA	207428	202925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_205470_205610_205668_205951_206044_207302
transcript_29010.known	chr11	-	2916	3	FSM	ENSG00000177951.18	ENST00000325147.13	2916	3	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	1	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATATGGTCTCTGTCGTCC	-205318	True	NA	-2	True	AATAAA	-35	NA	207382	202923	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_205668_205951_206044_207302
transcript_29014.known	chr11	+	2702	10	FSM	ENSG00000177963.15	ENST00000325207.9	2702	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	136.198384718762	232	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATGTGTAAATTATCAAA	207681	False	NA	17	True	AATAAA	-20	NA	208529	215113	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_208939_209270_209319_209406_210001_210570_210663_211198_211350_212415_212512_212596_212760_212836_212982_213298_213419_214229
transcript_2902.nic	chr1	+	2406	9	NIC	ENSG00000116691.11	novel	1541	10	NA	NA	-350	0	intron_retention	FALSE	canonical	3	420	junction_2	87.8456565517044	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCACGTGTGCTGGTTCC	12019100	False	NA	31	True	AATAAA	-22	NA	12019115	12032045	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_12019553_12021644_12021841_12022094_12022443_12022832_12022918_12029032_12029142_12029222_12029895_12030027_12030125_12031265_12031404_12031721
transcript_29034.known	chr11	-	2882	7	FSM	ENSG00000142082.15	ENST00000382743.9	2882	7	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_6	32.0767309223784	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGAGGGGCATTTTCCTTG	-234797	True	NA	NA	False	TATAAA	-17	NA	236342	215029	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_216719_218831_219042_224077_224240_230451_230553_232982_233216_233342_233535_236047
transcript_29035.known	chr11	-	1588	7	FSM	ENSG00000142082.15	ENST00000532837.5	1588	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_6	68.8565336204359	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTTTCCAGCATGAAATA	-234798	True	NA	-42	True	GGGGCT	-22	NA	236343	216178	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_216719_218831_219042_224077_224240_230451_230553_232982_233216_233342_233535_236193
transcript_29042.known	chr11	-	1225	7	FSM	ENSG00000142082.15	ENST00000529382.5	1225	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	80.431475320438	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCAGGTGAAACCAGAATA	-236745	False	NA	NA	False	NA	NA	NA	236834	216610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_216719_218831_219042_224077_224240_230451_230553_232982_233216_233342_233535_236615
transcript_29052.known	chr11	-	1395	6	FSM	ENSG00000142082.15	ENST00000524564.5	1395	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	102.255366607333	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGAATCAGACCAACTGG	-234809	True	NA	NA	False	AAAAAG	-26	NA	236354	216390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_216719_218777_219042_224077_224240_230451_230553_232982_233216_236047
transcript_29062.known	chr11	+	1589	13	FSM	ENSG00000185627.19	ENST00000532097.6	1589	13	0	0	0	0	multi-exon	FALSE	canonical	3	1063	junction_10	81.4876865272021	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGCTCTGTTTTCTTG	225304	True	NA	19	True	AATAAA	-19	NA	236975	252984	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_237145_238997_239077_244040_244076_244160_244217_244425_244470_244674_244762_247276_247449_248775_248856_248931_249058_250802_250866_251545_251627_251819_251937_252504
transcript_29063.known	chr11	+	1427	12	FSM	ENSG00000185627.19	ENST00000352303.9	1427	12	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_10	327.660300810569	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTATAATAAACCCCTCT	225354	True	NA	-12	True	NA	NA	NA	237025	252953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_237145_238997_239077_244040_244076_244160_244217_244425_244470_244674_244762_247276_247449_248775_248856_248931_249058_250802_250866_251819_251937_252504
transcript_29065.known	chr11	+	1632	12	FSM	ENSG00000185627.19	ENST00000525665.5	1632	12	0	0	0	0	multi-exon	FALSE	canonical	3	1063	junction_9	80.6429740039289	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTCTGCTTTGTTCTTCT	225328	True	NA	1	True	AATAAA	-1	NA	236999	252966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_237145_238997_239077_244040_244217_244425_244470_244674_244762_247276_247449_248775_248856_248931_249058_250802_250866_251545_251627_251819_251937_252504
transcript_29066.known	chr11	+	1489	12	FSM	ENSG00000185627.19	ENST00000382671.8	1489	12	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	322.619623531495	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTGGCTCTGTTTTC	225366	True	NA	16	True	AATAAA	-16	NA	237037	252981	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_237145_238997_239077_244160_244217_244425_244470_244674_244762_247276_247449_248775_248856_248931_249058_250802_250866_251545_251627_251819_251937_252504
transcript_29072.known	chr11	+	1591	11	FSM	ENSG00000185627.19	ENST00000431206.6	1591	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	355.170508347751	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTGGCTCTGTTTTC	225305	True	NA	16	True	AATAAA	-16	NA	236976	252981	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_237145_244040_244217_244425_244470_244674_244762_247276_247449_248775_248856_248931_249058_250802_250866_251545_251627_251819_251937_252504
transcript_29076.nnic	chr11	-	1068	2	Antisense	novelGene_ENSG00000255026.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	36	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTCCCTCAGTGTGCTTA	-288804	True	NA	-7	True	AATACA	-17	NA	289067	283061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr11_-_283244_288181
transcript_29081.known	chr11	+	3699	14	FSM	ENSG00000142102.16	ENST00000409548.7	3699	14	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	58.7596649484327	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGCTGAGACCTGTGGAC	285565	True	NA	NA	False	NA	NA	NA	289125	296107	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_289240_289803_290076_290389_290601_290677_291114_291975_292096_292545_292678_292885_292998_293162_293236_293365_293503_293593_293728_293829_293926_294098_294197_294266_294479_294555
transcript_29086.nic	chr11	+	3214	14	NIC	ENSG00000142102.16	novel	3699	14	NA	NA	-12	0	intron_retention	FALSE	canonical	2	8	junction_1	62.1030828494712	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCCTCTGAGGAGCCGC	285553	True	NA	13	True	ATTAAA	-22	NA	289113	295676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_289240_289869_290076_290389_290601_290677_291114_291975_292096_292545_292678_292885_292998_293162_293236_293365_293503_293593_293728_293829_293926_294098_294197_294266_294479_294555
transcript_2909.nic	chr1	+	1377	9	NIC	ENSG00000116691.11	novel	1541	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_1	171.668239272732	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCACGTGTGCTGGTTCC	12010898	True	NA	31	True	AATAAA	-22	NA	12019465	12032045	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_12019553_12022094_12022443_12022832_12022918_12029032_12029142_12029222_12029282_12029764_12029895_12030027_12030125_12031265_12031404_12031721
transcript_29097.nnic	chr11	+	3378	13	NNC	ENSG00000142102.16	novel	3699	14	NA	NA	-24	0	intron_retention	FALSE	canonical	3	53	junction_1	52.9015726504316	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCCTCTGAGGAGCCGC	285541	True	NA	13	True	ATTAAA	-22	NA	289101	295676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_289240_289794_290076_290389_291114_291975_292096_292545_292678_292885_292998_293162_293236_293365_293503_293593_293728_293829_293926_294098_294197_294266_294479_294555
transcript_29107.nic	chr11	+	3929	12	NIC	ENSG00000142102.16	novel	3699	14	NA	NA	-20	0	intron_retention	FALSE	canonical	3	109	junction_7	45.4918029125183	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCCTCTGAGGAGCCGC	285545	True	NA	13	True	ATTAAA	-22	NA	289105	295676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_290076_290389_291114_291975_292096_292545_292678_292885_292998_293162_293236_293365_293503_293593_293728_293829_293926_294098_294197_294266_294479_294555
transcript_2912.nic	chr1	+	2199	8	NIC	ENSG00000116691.11	novel	1541	10	NA	NA	-10	0	intron_retention	FALSE	canonical	3	420	junction_2	93.7882982997303	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCACGTGTGCTGGTTCC	12010888	True	NA	31	True	AATAAA	-22	NA	12019455	12032045	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_12019553_12021644_12021841_12022094_12022443_12022832_12022918_12029032_12029142_12029222_12030125_12031265_12031404_12031721
transcript_29143.known	chr11	+	634	3	FSM	ENSG00000185201.18	ENST00000527146.1	634	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTGCTGTGACTTCACC	294078	False	NA	26	True	AATAAA	-15	NA	308319	309392	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_308439_308754_308890_309012
transcript_29144.known	chr11	+	804	3	FSM	ENSG00000185885.17	ENST00000679765.1	804	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	664.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTGTGACTTCATCTG	236442	True	NA	25	True	AATAAA	-17	NA	314039	315272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_314357_314673_314810_314921
transcript_29145.known	chr11	+	907	2	FSM	ENSG00000185201.18	ENST00000616316.3	1006	2	99	0	99	0	multi-exon	FALSE	canonical	3	1446	junction_1	0	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTGACTTCACCTGG	NA	False	NA	29	True	AATAAA	-18	NA	307914	309395	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_308439_309012
transcript_29146.known	chr11	+	713	2	FSM	ENSG00000185201.18	ENST00000399817.9	713	2	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGACTTCACCTGGGG	293864	True	NA	31	True	AATAAA	-20	NA	308105	309397	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_308439_309017
transcript_29147.known	chr11	+	662	2	FSM	ENSG00000185885.17	ENST00000681938.1	662	2	0	0	0	0	multi-exon	FALSE	canonical	3	1057	junction_1	0	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGCTGTGACTTCATCT	236442	True	NA	24	True	AATAAA	-16	NA	314039	315271	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_314357_314926
transcript_29149.known	chr11	+	668	2	FSM	ENSG00000185885.17	ENST00000408968.4	668	2	0	0	0	0	multi-exon	FALSE	canonical	3	19705	junction_1	0	5121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTGTGACTTCATCTG	236442	True	NA	25	True	AATAAA	-17	NA	314039	315272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_314357_314921
transcript_29150.known	chr11	+	844	3	FSM	ENSG00000185885.17	ENST00000328221.5	844	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	9849	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGTCATTCAATAAAGTGC	299285	False	NA	-7	True	NA	NA	NA	313526	315240	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_313692_313996_314357_314921
transcript_29151.known	chr11	-	725	3	FSM	ENSG00000142089.17	ENST00000531688.2	725	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	227.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTGCTGCGACTTCACC	-272974	True	NA	-24	True	AATAAA	-15	NA	320841	319678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_319991_320112_320249_320564
transcript_29152.known	chr11	-	587	2	FSM	ENSG00000142089.17	ENST00000679382.1	587	2	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGCGACTTCACCTGG	-272974	True	NA	-21	True	AATAAA	-18	NA	320841	319675	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_319986_320564
transcript_29153.known	chr11	-	611	2	FSM	ENSG00000142089.17	ENST00000399808.5	611	2	0	0	0	0	multi-exon	FALSE	canonical	3	8146	junction_1	0	1743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGCGACTTCACCTGG	-272993	True	NA	-21	True	AATAAA	-18	NA	320860	319675	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_319991_320564
transcript_29154.known	chr11	-	651	2	FSM	ENSG00000142089.17	ENST00000680209.1	651	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGCGACTTCACCTGG	-272993	True	NA	-21	True	AATAAA	-18	NA	320860	319675	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_320031_320564
transcript_29157.nic	chr11	+	2816	14	NIC	ENSG00000184363.10	novel	2817	13	NA	NA	-80	0	intron_retention	TRUE	canonical	3	35	junction_1	31.0833961270788	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCCTGTGTCCTTCCATG	NA	False	NA	22	True	AATAAA	-19	NA	394064	404908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_394184_394328_394525_396607_396688_396813_397446_397538_397663_398991_399197_399966_400142_400333_400452_400534_400706_403077_403264_403617_403772_403942_404136_404235_404324_404533
transcript_29161.known	chr11	+	2817	13	FSM	ENSG00000184363.10	ENST00000331563.7	2817	13	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_6	14.1882189000436	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCCTGTGTCCTTCCATG	392713	True	NA	22	True	AATAAA	-19	NA	394208	404908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_394525_396607_396688_396813_397446_397538_397663_398991_399197_399966_400142_400333_400452_400534_400706_403077_403264_403617_403772_403942_404136_404235_404324_404533
transcript_29177.known	chr11	-	608	3	FSM	ENSG00000185187.13	ENST00000526395.5	608	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	94.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	-406213	True	NA	-6	True	AATAAA	-17	NA	407135	405715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_406060_406348_406539_407061
transcript_29179.known	chr11	-	2867	23	FSM	ENSG00000185101.13	ENST00000332826.7	2867	23	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	8.61240696431655	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTGCTTTCCTGGCCTC	-441686	True	NA	-17	True	AGTAAA	-13	NA	442011	417937	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_418590_418719_418814_418887_418990_419581_419730_420462_420616_420717_420861_420944_421043_421140_421199_428087_428200_428357_428395_428474_428640_428721_428827_429569_429653_429757_429819_430082_430180_430268_430404_431693_431768_431847_431907_431998_432055_433313_433460_433814_433938_434023_434099_441920
transcript_29209.nic	chr11	+	1994	13	NIC	ENSG00000174915.12	novel	2458	12	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_12	63.1771649147591	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCCCGTGTCCTGCTTTG	450197	False	NA	37	True	AATAAA	-39	NA	450264	491399	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_450638_460186_460289_473894_473978_479084_479153_486938_487074_487419_487471_488198_488313_488528_488648_489399_489515_489587_489734_489882_490069_490419_490643_491120
transcript_29211.nnic	chr11	+	2520	12	NNC	ENSG00000174915.12	novel	2458	12	NA	NA	-14	0	intron_retention	FALSE	canonical	3	14	junction_4	70.4519061089206	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCCCGTGTCCTGCTTTG	450197	False	NA	37	True	AATAAA	-39	NA	450264	491399	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_450638_460186_460289_473894_473978_479084_479153_486890_487074_487419_487471_488198_488313_488528_488648_489399_489515_489587_489734_489882_490069_490419
transcript_29213.known	chr11	+	2458	12	FSM	ENSG00000174915.12	ENST00000308020.6	2458	12	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_10	17.2483080976484	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCCCGTGTCCTGCTTTG	445922	True	NA	37	True	AATAAA	-39	NA	450278	491399	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_450638_460186_460289_473894_473978_479084_479153_486938_487074_487419_487471_488198_488313_488528_488648_489399_489515_489587_489734_489882_490069_490419
transcript_29233.nnic	chr11	+	2321	10	NIC	ENSG00000174915.12	novel	2458	12	NA	NA	-14	0	intron_retention	FALSE	canonical	0	0	junction_2	80.2191442930621	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCCCGTGTCCTGCTTTG	450197	False	NA	37	True	AATAAA	-39	NA	450264	491399	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_450638_460186_460289_486938_487074_487419_487471_488198_488313_488528_488648_489399_489515_489587_489734_489882_490069_490419
transcript_29250.nic	chr11	-	2022	11	NIC	ENSG00000023191.17	novel	2014	11	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	3	115	junction_10	133.515392371067	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGAGGCTCTTGTCCTTCC	-504695	False	NA	-4	True	ATTAAA	-15	NA	506876	494514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502182_504823_504997_506608
transcript_29251.known	chr11	-	1829	11	FSM	ENSG00000023191.17	ENST00000533410.5	1829	11	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_10	145.246170345383	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTTATAATCATTAAAGCA	-505037	True	NA	-35	True	NA	NA	NA	507218	494545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502182_504823_504997_507112
transcript_29254.known	chr11	-	2014	11	FSM	ENSG00000023191.17	ENST00000397615.6	2014	11	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_9	142.986852542463	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGAGGCTCTTGTCCTTCC	-504619	False	NA	-4	True	ATTAAA	-15	NA	506800	494514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502250_504823_504997_506608
transcript_29255.known	chr11	-	1952	11	FSM	ENSG00000023191.17	ENST00000354420.7	1952	11	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_10	153.820057209715	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGAGGCTCTTGTCCTTCC	-505061	True	NA	-4	True	ATTAAA	-15	NA	507242	494514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502250_504823_504997_507112
transcript_29261.known	chr11	-	1725	10	FSM	ENSG00000023191.17	ENST00000438658.6	1725	10	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_9	129.179270591753	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACTTTATAATCATTAAAG	-504604	False	NA	-37	True	NA	NA	NA	506785	494547	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502182_506608
transcript_29262.known	chr11	-	1722	10	FSM	ENSG00000023191.17	ENST00000397604.7	1722	10	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_9	107.572657042623	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGAGGCTCTTGTCCTTCC	-505072	True	NA	-4	True	ATTAAA	-15	NA	507253	494514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502182_507112
transcript_29263.known	chr11	-	1864	10	FSM	ENSG00000023191.17	ENST00000397614.5	1864	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_9	136.678861244565	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGCTCTTGTCCTTCCTG	-504640	False	NA	-2	True	ATTAAA	-17	NA	506821	494512	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502250_506608
transcript_29264.known	chr11	-	1791	10	FSM	ENSG00000023191.17	ENST00000356187.9	1791	10	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_9	113.440145745087	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATATTTTGGACACTTT	NA	False	NA	-50	True	NA	NA	NA	507300	494560	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502250_507112
transcript_29284.known	chr11	-	1114	7	FSM	ENSG00000174775.18	ENST00000493230.5	1114	7	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	101.959142143638	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTTTCGGCTGAGGG	-534631	True	NA	-5	True	AGTAAA	-18	NA	535538	532241	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_532523_532630_532756_533276_533359_533452_533613_533765_533945_534211_534376_535415
transcript_29287.known	chr11	-	1070	6	FSM	ENSG00000174775.18	ENST00000311189.8	1070	6	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_2	39.700881602302	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTTTCGGCTGAGGG	NA	False	NA	-5	True	AGTAAA	-18	NA	535576	532241	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_532523_532630_532756_533452_533613_533765_533945_534211_534376_535415
transcript_29291.known	chr11	-	1244	6	FSM	ENSG00000174775.18	ENST00000417302.6	1244	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	103.035139636922	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATTGGATGGTCTTGA	NA	False	NA	-25	True	NA	NA	NA	535580	532261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_532756_533276_533359_533452_533613_533765_533945_534211_534376_535415
transcript_29293.known	chr11	-	1151	5	FSM	ENSG00000174775.18	ENST00000451590.5	1151	5	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	40.5732362524855	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGGTTTTCGGCTGAGG	-534643	True	NA	-6	True	AGTAAA	-17	NA	535550	532242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_532756_533452_533613_533765_533945_534211_534376_535415
transcript_29302.known	chr11	-	2057	14	FSM	ENSG00000185522.9	ENST00000329451.8	2057	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_13	6.77097879528166	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGGAAATGTTGGTTTG	-560139	False	599	-1	True	AGTAAA	-21	NA	560738	554849	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_555112_555304_555504_555733_555931_555995_556116_556191_556376_556491_556589_556834_557098_557398_557488_557571_557641_557883_558040_558160_558249_558613_558767_558855_558980_560682
transcript_29323.nic	chr11	+	1621	6	NIC	ENSG00000099849.15	novel	2017	6	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_4	185.60775845853	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGGAGGCTGCGCT	NA	False	NA	12	True	AATAAA	-19	NA	560921	564025	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_561034_561761_561893_562078_562777_563188_563318_563395_563479_563557
transcript_29325.known	chr11	+	2017	6	FSM	ENSG00000099849.15	ENST00000397583.8	2017	6	0	0	0	0	multi-exon	FALSE	canonical	1	17	junction_1	212.52613956876	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGGAGGCTGCGCT	557332	True	NA	12	True	AATAAA	-19	NA	560969	564025	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_561478_561761_561893_562078_562777_563188_563318_563395_563479_563557
transcript_29329.nic	chr11	+	1697	5	NIC	ENSG00000099849.15	novel	2017	6	NA	NA	-34	1	intron_retention	FALSE	canonical	3	72	junction_4	170.190334625677	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTGTGTGGAGGCTGC	NA	False	NA	9	True	AATAAA	-16	NA	560921	564022	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_561034_561761_561893_562078_562777_563188_563318_563395
transcript_29330.nic	chr11	+	1534	5	NIC	ENSG00000099849.15	novel	2017	6	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_4	166.607885467645	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTGTGTGTGGAGGCTG	NA	False	NA	8	True	AATAAA	-15	NA	560921	564021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_561034_561761_561893_562078_562777_563188_563318_563557
transcript_29334.known	chr11	+	1450	5	FSM	ENSG00000099849.15	ENST00000454668.2	1450	5	0	0	0	0	multi-exon	FALSE	canonical	1	17	junction_1	220.436498792736	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTGTGTGTGGAGGCTG	557812	False	NA	8	True	AATAAA	-15	NA	561449	564021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_561478_561761_561893_562078_562777_563188_563318_563557
transcript_29337.known	chr11	+	1679	4	FSM	ENSG00000099849.15	ENST00000414138.6	1679	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	189.996491195671	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACCCCAACGTGAAAACCT	557333	True	NA	-33	True	NA	NA	NA	560970	563980	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_561034_561761_561893_562083_562777_563188
transcript_29341.nic	chr11	+	2111	4	ISM	ENSG00000099849.15	ENST00000397583.8	2017	6	50	13	33	0	intron_retention	FALSE	canonical	1	17	junction_1	222.105580499205	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGCAGCTTGAGTGTGTG	557382	True	NA	-1	True	AATAAA	-6	NA	561019	564012	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_561478_561761_561893_562078_562777_563188
transcript_29347.known	chr11	+	2210	2	FSM	ENSG00000254815.6	ENST00000527620.5	2210	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTCACCCTTCATCTCT	NA	False	NA	10	True	ATTAAA	-14	NA	557594	560106	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_559477_559778
transcript_29348.known	chr11	+	425	2	FSM	ENSG00000099849.15	ENST00000524468.1	425	2	0	0	0	0	multi-exon	FALSE	canonical	2	34	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGGCCATGAGGCCTTC	557349	True	NA	NA	False	NA	NA	NA	560986	562456	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_561034_562078
transcript_29349.known	chr11	-	1965	2	FSM	ENSG00000247095.4	ENST00000500447.2	1992	2	27	0	7	0	multi-exon	FALSE	canonical	2	36	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGTTTTTTGTTGTTA	-567821	True	NA	-2	True	TATAAA	-16	NA	568420	565659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_567556_568351
transcript_29350.known	chr11	-	367	2	FSM	ENSG00000247095.4	ENST00000534540.2	966	2	72	527	58	-382	multi-exon	FALSE	canonical	2	34	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGAGAGGGAGAGGCAGA	-567770	False	NA	NA	False	NA	NA	NA	568369	567525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_567854_568330
transcript_29351.known	chr11	-	816	2	FSM	ENSG00000247095.4	ENST00000533920.1	816	2	0	0	0	0	multi-exon	FALSE	canonical	2	149	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGCCCGCCCTGCTGTGG	-567858	True	NA	-90	True	NA	NA	NA	568457	567143	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_567854_568351
transcript_29360.known	chr11	+	5224	18	FSM	ENSG00000070047.13	ENST00000413872.6	5224	18	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_11	68.6252044450223	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTGCTCACAGTTGAAA	573610	True	NA	-27	True	NA	NA	NA	576520	611964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_576593_581491_581607_581964_582082_587258_587465_591383_591468_592558_592675_596922_597021_597394_597571_598372_598503_601573_601702_605118_605301_605607_605725_606441_606597_607065_609721_610195_610348_610500_610762_610953_611083_611633
transcript_2937.known	chr1	+	3760	15	FSM	ENSG00000120949.15	ENST00000263932.7	3760	15	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	9.10735293875341	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGAGGACATGATCATCG	12061631	True	NA	27	True	CATAAA	-19	NA	12063302	12144207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_12063662_12084463_12084552_12097100_12097218_12104378_12104532_12109565_12109657_12110040_12110205_12111897_12112015_12115576_12115730_12123283_12123378_12123714_12123828_12125950_12126053_12126182_12126237_12135587_12135614_12138228_12138437_12142286
transcript_29373.nic	chr11	+	3737	14	ISM	ENSG00000070047.13	ENST00000534320.5	5178	18	-275	3253	-259	1948	5prime_fragment	FALSE	canonical	3	127	junction_2	24.9385042471043	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGATCAGCGTCCAGACCT	NA	False	NA	25	True	AAGAAA	-2	NA	576210	608790	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_576593_581491_581607_581961_582082_587258_587465_591383_591468_592558_592675_596922_597021_597394_597571_598372_598503_601573_601702_605118_605301_605604_605725_606441_606597_607065
transcript_29376.nic	chr11	+	1157	9	ISM	ENSG00000070047.13	ENST00000416188.3	5278	18	0	13473	0	-8351	5prime_fragment	FALSE	canonical	3	127	junction_2	28.0933154860725	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAAGACAAGTAAGCCTG	NA	False	NA	NA	False	NA	NA	NA	576469	598491	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_576593_581491_581607_581961_582082_587258_587465_591383_591468_592558_592675_596922_597021_597394_597571_598372
transcript_2938.nnic	chr1	+	4020	15	NNC	ENSG00000120949.15	novel	3760	15	NA	NA	188	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	19.1855866392945	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGAGGACATGATCATCG	12063625	False	NA	27	True	CATAAA	-19	NA	12063657	12144207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_12064277_12084463_12084552_12097100_12097218_12104378_12104532_12109565_12109657_12110040_12110205_12111897_12112015_12115576_12115730_12123283_12123378_12123714_12123828_12125950_12126053_12126182_12126237_12135587_12135614_12138228_12138437_12142286
transcript_29381.known	chr11	-	1923	11	FSM	ENSG00000185507.21	ENST00000525445.6	1923	11	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	13.5262707351287	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTACTGGCATCTTGGCTGG	-615107	True	NA	-3	True	AATAAA	-16	NA	615950	612554	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_612801_612998_613118_613205_613596_613784_613866_613950_614038_614173_614400_614475_614535_614796_615008_615096_615260_615344_615648_615912
transcript_29382.known	chr11	-	1992	10	FSM	ENSG00000185507.21	ENST00000330243.9	1992	10	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	13.9186348131463	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGCCGCCCAGTCTAATAA	-615127	True	NA	-39	True	NA	NA	NA	615970	612590	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_612801_612998_613118_613205_613596_613784_613866_613950_614038_614173_614400_614475_614535_614796_615008_615096_615648_615912
transcript_29385.known	chr11	-	1807	10	FSM	ENSG00000185507.21	ENST00000348655.11	1807	10	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_4	22.2299986393651	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTACTGGCATCTTGGCTGG	-615078	False	NA	-3	True	AATAAA	-16	NA	615921	612554	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_612801_612998_613118_613205_613596_613784_613866_614173_614400_614475_614535_614796_615008_615096_615260_615344_615648_615912
transcript_29399.known	chr11	-	1596	9	FSM	ENSG00000185507.21	ENST00000469048.6	1596	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	21.2599241532043	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAGTCTAATAAAAAGAACT	-614769	False	NA	-31	True	NA	NA	NA	615612	612582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_612801_612998_613118_613205_613596_613784_613866_613950_614038_614475_614535_614796_615008_615096_615260_615344
transcript_294.nnic	chr1	-	2463	11	NNC	ENSG00000279457.4	novel	1397	10	NA	NA	-5189	297	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_4	86.3854733158301	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACAGTGTGCTTTTAATA	NA	False	NA	NA	False	AATAAA	-15	NA	200600	184919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_185351_185490_185560_186316_186470_187128_187288_187375_187578_187754_187891_188129_188267_188438_188585_188790_188903_195262_195417_199836
transcript_29400.known	chr11	-	526	4	FSM	ENSG00000070031.4	ENST00000176195.4	526	4	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_1	1.88561808316413	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGGAGTTGTCTGTGTC	-627124	True	NA	0	True	AATAAA	-19	NA	627181	626308	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_626531_626696_626790_626887_626990_627072
transcript_29402.known	chr11	+	1399	4	FSM	ENSG00000069696.7	ENST00000176183.6	1399	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	3.39934634239519	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCTGTGAAGGCTCCTG	NA	False	NA	11	True	ATTAAA	-17	NA	637268	640706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_637590_639432_639546_639647_640307_640400
transcript_29408.known	chr11	+	3266	22	FSM	ENSG00000177106.17	ENST00000533256.5	3266	22	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	73.0094579652592	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCGTGTGTCTCAGTTC	706082	False	NA	14	True	ATTAAA	-17	NA	706116	727724	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_706289_706676_706802_709329_709452_709552_709609_710421_710487_720061_720224_720596_720747_720829_720910_721063_721207_721284_721353_721564_721692_721902_721992_722090_722166_722400_722550_722672_722806_723240_723354_724723_724830_725727_725848_726097_726171_726303_726485_726618_726752_726900
transcript_2941.known	chr1	+	2412	14	FSM	ENSG00000120949.15	ENST00000514649.5	2412	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	24.24993137305	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGCCACACTGTACTCTGC	12061798	False	NA	97	True	NA	NA	NA	12063469	12143117	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_12063662_12097100_12097218_12104378_12104532_12109565_12109657_12110040_12110205_12111897_12112015_12115576_12115730_12123283_12123378_12123714_12123828_12125950_12126053_12126182_12126237_12135587_12135614_12138231_12138437_12142286
transcript_29418.known	chr11	+	3188	21	FSM	ENSG00000177106.17	ENST00000614442.4	3188	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	71.961725938168	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGTGTGTCTCAGTTCTC	706085	False	NA	16	True	ATTAAA	-19	NA	706119	727726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_706289_709329_709452_709552_709609_710421_710487_720061_720224_720548_720747_720829_720910_721063_721207_721284_721353_721564_721692_721902_721992_722090_722166_722400_722550_722672_722806_723240_723354_724723_724830_725727_725848_726097_726171_726303_726485_726618_726752_726900
transcript_29422.known	chr11	+	3030	21	FSM	ENSG00000177106.17	ENST00000318562.13	3030	21	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_12	67.0004477596978	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTGTCTCAGTTCTCT	705211	True	NA	17	True	ATTAAA	-20	NA	706230	727727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_706289_709329_709452_709552_709609_710421_710487_720061_720224_720596_720747_720829_720910_721063_721207_721284_721353_721564_721692_721902_721992_722090_722166_722400_722550_722672_722806_723240_723354_724723_724830_725727_725848_726097_726171_726303_726485_726618_726752_726900
transcript_29424.known	chr11	+	2554	21	FSM	ENSG00000177106.17	ENST00000650127.1	2554	21	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_20	64.0192158652385	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCTAAGCAATTAAACCAG	705196	True	NA	-18	True	NA	NA	NA	706215	727692	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_706289_709329_709452_709552_709609_710421_710487_720061_720224_720596_720747_720829_720910_721063_721207_721284_721353_721564_721692_721902_721992_722090_722166_722400_722550_722672_722806_723240_723354_724723_724830_725727_725848_726097_726171_726303_726485_726618_726752_727356
transcript_29438.nic	chr11	+	3488	20	NIC	ENSG00000177106.17	novel	3266	22	NA	NA	-112	0	intron_retention	TRUE	canonical	3	64	junction_7	67.234859379562	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCGTGTGTCTCAGTTC	NA	False	NA	14	True	ATTAAA	-17	NA	706004	727724	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_706289_709329_709452_709552_709609_710421_710487_720061_720224_720596_720747_720829_720910_721063_721207_721284_721353_721564_721692_721902_721992_722090_722550_722672_722806_723240_723354_724723_724830_725727_725848_726097_726171_726303_726485_726618_726752_726900
transcript_2948.known	chr1	+	2363	5	FSM	ENSG00000120949.15	ENST00000413146.6	2363	5	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	3.39116499156263	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGAGGACATGATCATCG	NA	False	NA	27	True	CATAAA	-19	NA	12125898	12144207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_12126053_12126182_12126237_12135587_12135614_12138228_12138437_12142286
transcript_29488.nic	chr11	-	2468	13	NIC	ENSG00000177030.19	novel	2190	12	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	267.864238001268	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGCCCCACACGGCCGG	-695212	False	NA	-15	True	AATAAA	-15	NA	695254	644232	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_644655_651161_651408_653961_654052_674535_674784_678693_678823_679687_679817_680962_681090_684897_684964_686857_686998_687910_688058_688330_688461_691500_691599_694758
transcript_2949.known	chr1	+	3687	10	FSM	ENSG00000028137.19	ENST00000376259.7	3687	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	1.15470053837925	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTCGACCCCTGGCTCTG	12166881	True	NA	4	True	AATAAA	-14	NA	12166990	12209220	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_12167170_12188795_12188896_12190956_12191086_12191773_12191924_12192430_12192525_12192862_12193099_12193954_12194033_12194583_12194619_12201966_12202172_12206739
transcript_29505.nnic	chr11	-	2156	13	NNC	ENSG00000177030.19	novel	2190	12	NA	NA	-12	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_11	235.684272680399	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGCCCCACACGGCCGG	-695192	False	NA	-15	True	AATAAA	-15	NA	695234	644232	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_644655_653961_654052_674535_674784_678693_678823_679687_679817_680962_681090_684897_684964_686857_686998_687910_688058_688330_688461_691500_691599_694758_694948_694993
transcript_2951.known	chr1	+	3583	9	FSM	ENSG00000028137.19	ENST00000492361.1	3583	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.93417364857638	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCTCTGCCTGGGGT	12166893	True	NA	12	True	AATAAA	-22	NA	12167002	12209228	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_12167170_12190956_12191086_12191773_12191924_12192430_12192525_12192862_12193099_12193954_12194033_12194583_12194619_12201966_12202172_12206739
transcript_29516.nic	chr11	-	2781	12	NIC	ENSG00000177030.19	novel	2190	12	NA	NA	-511	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_11	164.596928161891	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGCCCCACACGGCCGG	-695691	True	NA	-15	True	AATAAA	-15	NA	695733	644232	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_644655_653961_654052_674535_674784_678693_678823_679687_679817_680962_681090_684897_684964_686857_686998_687910_688058_688330_688461_691500_691599_694678
transcript_29517.known	chr11	-	2190	12	FSM	ENSG00000177030.19	ENST00000382409.4	2190	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	184.747180387569	1019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGCCCCACACGGCCGG	-694982	True	NA	-15	True	AATAAA	-15	NA	695222	644232	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_644655_653961_654052_674535_674784_678693_678823_679687_679817_680962_681090_684897_684964_686857_686998_687910_688058_688330_688461_691500_691599_694758
transcript_29518.known	chr11	-	2267	12	FSM	ENSG00000177030.19	ENST00000683307.1	2267	12	0	0	0	0	multi-exon	FALSE	canonical	1	41	junction_11	173.405510507539	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTCCCTGCCCCACAC	NA	False	NA	-21	True	AATAAA	-9	NA	707118	644238	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_644655_653961_654052_674535_674784_678693_678823_679687_679817_680962_681090_684897_684964_686857_686998_687910_688058_688330_688461_691500_691599_706571
transcript_2954.known	chr1	+	16357	70	FSM	ENSG00000048707.15	ENST00000620676.6	16357	70	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_40	27.3745597158882	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTCTTTTGTTTTCTTC	12228047	True	NA	20	True	AATAAA	-22	NA	12230029	12512047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_12230121_12234190_12234364_12242512_12242591_12244245_12244437_12244536_12244618_12249222_12249340_12253721_12253827_12256332_12256504_12256986_12257088_12257934_12258104_12260692_12260795_12260947_12261150_12261900_12262081_12266880_12267012_12267844_12267921_12268705_12268877_12270993_12271125_12273002_12273136_12275824_12278039_12279498_12279651_12282704_12283737_12288222_12288314_12290997_12291125_12293523_12293705_12299201_12299385_12304505_12304729_12308430_12308642_12311453_12311626_12311812_12311926_12314114_12314328_12318071_12318338_12319496_12319631_12321808_12321965_12322535_12322747_12323705_12323781_12327647_12327855_12329828_12329919_12333225_12333367_12335704_12335828_12338230_12338306_12341779_12341886_12342898_12343052_12345373_12345510_12346604_12346653_12348822_12348974_12349163_12349375_12353973_12354222_12355898_12356091_12356397_12356525_12358458_12358602_12362719_12362851_12363071_12363248_12368467_12368592_12369466_12369703_12373749_12373859_12378427_12378592_12379487_12379597_12382975_12383156_12385259_12385374_12386184_12386335_12400180_12400331_12401607_12401705_12403824_12403974_12415086_12415222_12416659_12416828_12455997_12456131_12460200_12460397_12497499_12497632_12506852_12507094_12508892
transcript_29544.nic	chr11	+	796	6	NIC	ENSG00000177042.16	novel	1423	5	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	158	junction_1	54.872215191297	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCCTAATTATGGCCACC	694428	True	NA	26	True	AATAAA	-23	NA	695789	704129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_695847_698868_698889_700141_700236_700614_700708_702944_703147_703799
transcript_29548.known	chr11	+	1423	5	FSM	ENSG00000177042.16	ENST00000397510.9	1423	5	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	52.4928566568824	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCCTAATTATGGCCACC	694454	True	NA	26	True	AATAAA	-23	NA	695815	704129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_695847_698868_698889_700141_700236_700614_700708_702944
transcript_29550.known	chr11	+	1572	5	FSM	ENSG00000177042.16	ENST00000397512.8	1572	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	118.014829576626	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCCTAATTATGGCCACC	695582	False	NA	26	True	AATAAA	-23	NA	695642	704129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_695823_698868_698889_700141_700236_700614_700708_702944
transcript_29556.known	chr11	+	669	4	FSM	ENSG00000177042.16	ENST00000488769.2	669	4	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	57.4475606289964	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCAGCCTCCCCACTCCA	694443	True	NA	NA	False	NA	NA	NA	695804	701127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_695847_698868_698889_700141_700236_700614
transcript_29569.known	chr11	+	1597	6	FSM	ENSG00000177106.17	ENST00000527832.5	1597	6	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	73.2518941734615	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGCCGTGTGTCTCAGT	724492	True	NA	12	True	ATTAAA	-15	NA	724561	727722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_724830_725727_725848_726097_726171_726303_726485_726618_726752_726900
transcript_29570.known	chr11	+	2233	13	FSM	ENSG00000177106.17	ENST00000528770.5	2233	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	86.5269306182891	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGCCGTGTGTCTCAGTT	720989	False	NA	13	True	ATTAAA	-16	NA	721074	727723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_721207_721284_721353_721564_721692_722090_722166_722400_722550_722672_722806_723240_723354_724723_724830_725727_725848_726097_726171_726303_726485_726618_726752_726900
transcript_29571.known	chr11	+	2304	9	FSM	ENSG00000177106.17	ENST00000531393.5	2304	9	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_4	78.700381193486	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGAGCCGTGTGTCTCAG	721840	False	NA	11	True	ATTAAA	-14	NA	721925	727721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_722550_722672_722806_723240_723354_724723_724830_725727_725848_726097_726171_726303_726485_726618_726752_726900
transcript_29574.known	chr11	+	1199	8	FSM	ENSG00000177156.11	ENST00000319006.8	1199	8	0	0	0	0	multi-exon	FALSE	canonical	3	2011	junction_1	95.2401904531434	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGTTTCATTCACTGT	713369	True	NA	18	True	ATTAAA	-15	NA	747463	765012	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_747579_755878_756003_758949_759058_760121_760254_763343_763520_763746_763945_764287_764434_764812
transcript_29583.known	chr11	+	1231	8	FSM	ENSG00000177156.11	ENST00000528097.5	1231	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	728.903481754811	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGTTTCATTCACTGT	713333	True	NA	18	True	ATTAAA	-15	NA	747427	765012	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_747579_755878_756003_758949_759058_760121_760254_763343_763520_763746_763941_764287_764434_764812
transcript_2960.known	chr1	-	2201	6	FSM	ENSG00000162496.9	ENST00000616661.5	2201	6	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_5	22.4321198284959	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTGTTCAAATCTTC	-12617224	True	NA	-12	True	AATAAA	-19	NA	12618210	12567909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_12568425_12572727_12572854_12578717_12578957_12579292_12579413_12580522_12580667_12617153
transcript_2961.known	chr1	-	2168	2	FSM	ENSG00000162494.6	ENST00000376085.4	2168	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAATCTCTGGTATTCTGT	-13513991	True	NA	NA	False	AATAAA	-25	NA	13514003	13474972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_13476100_13512962
transcript_29618.known	chr11	-	790	8	FSM	ENSG00000177225.17	ENST00000397472.6	790	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	18.3992014023679	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCCTGGTGTTCGCAG	-774590	False	NA	-23	True	AATAAA	-21	NA	777471	767221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_767374_770313_770399_771332_771427_772426_772522_773521_773630_774007_774114_775065_775143_777398
transcript_2962.known	chr1	+	3104	6	FSM	ENSG00000162493.17	ENST00000294489.10	3104	6	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_5	164.449870781342	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGAGTCAGACTTTTGTT	NA	False	NA	15	True	AATAAA	-19	NA	13583464	13617957	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_13584101_13607172_13607307_13610386_13610517_13613686_13613726_13614299_13614412_13615904
transcript_29635.nic	chr11	-	2228	8	NIC	ENSG00000177225.17	novel	4363	8	NA	NA	-10	692	intron_retention	FALSE	canonical	3	15	junction_7	13.2387803865178	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGCCTGGCATGGTGGTG	-774308	False	NA	NA	False	AATACA	-5	NA	777189	769777	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_770904_770992_771105_771332_771427_772426_772522_773521_773630_774007_774114_775065_775143_776679
transcript_29636.known	chr11	-	4363	8	FSM	ENSG00000177225.17	ENST00000319863.13	4363	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	10.1900311429297	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCCTGGTGTTCGCAG	-774606	True	NA	-23	True	AATAAA	-21	NA	777487	767221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_770904_770992_771105_771332_771427_772426_772522_773521_773630_774007_774114_775065_775143_777398
transcript_29639.nic	chr11	-	761	7	NIC	ENSG00000177225.17	novel	790	8	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	14.243907079481	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCCTGGTGTTCGCAG	NA	False	NA	-23	True	AATAAA	-21	NA	777527	767221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_767374_771332_771427_772426_772522_773521_773630_774007_774114_775065_775143_777398
transcript_29640.known	chr11	-	756	7	FSM	ENSG00000177225.17	ENST00000526325.5	756	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	19.3426701592332	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAATGGTGTCCTGGTGT	-774606	True	NA	-29	True	AATAAA	-15	NA	777487	767227	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_767374_771332_771468_772426_772522_773521_773630_774007_774114_775065_775143_777398
transcript_2966.known	chr1	+	2801	6	FSM	ENSG00000162493.17	ENST00000376057.8	2801	6	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_5	168.31803230789	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGAGTCAGACTTTTGTT	13578885	True	NA	15	True	AATAAA	-19	NA	13583761	13617957	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_13584101_13607172_13607307_13610386_13610517_13613686_13613726_13614299_13614406_13615904
transcript_29665.known	chr11	+	610	4	FSM	ENSG00000255284.3	ENST00000525941.1	610	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	5.43650214343336	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAACCGGCTGTGGTGGCG	776227	True	NA	NA	False	AATACA	-15	NA	777607	784297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_777696_778112_778219_783529_783672_784023
transcript_29668.known	chr11	+	765	2	FSM	ENSG00000255284.3	ENST00000530083.2	891	2	8	118	0	-117	multi-exon	FALSE	canonical	2	10	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCAGCAGTTTGGGAGG	776201	True	NA	NA	False	AAGAAA	-36	NA	777581	784180	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_777696_783529
transcript_29669.known	chr11	-	1605	2	FSM	ENSG00000184524.6	ENST00000330106.5	1605	2	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGCTCTTGCATCCTCAT	-786159	False	3931	-24	True	AATAAA	-15	NA	790090	787114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_788659_790029
transcript_29683.known	chr11	-	2984	16	FSM	ENSG00000177595.19	ENST00000347755.10	2984	16	0	0	0	0	multi-exon	TRUE	canonical	2	60	junction_14	35.1185927331315	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGAGCTTGATTTATTT	-803636	True	NA	-6	True	NA	NA	NA	805231	799183	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_799566_799814_800015_800130_800245_800332_800452_800542_800667_800761_800913_800984_801121_801217_801366_801444_801625_801964_802091_802194_802397_802542_802598_802681_802892_803173_803588_804093_804464_805178
transcript_29687.nic	chr11	-	3094	16	NIC	ENSG00000177595.19	novel	2984	16	NA	NA	-51	0	combination_of_known_junctions	FALSE	canonical	2	45	junction_14	36.9104622325733	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCAGAGCTTGATTTATT	-805241	False	NA	-7	True	NA	NA	NA	805282	799184	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_799566_799814_800015_800130_800245_800332_800452_800542_800667_800761_800913_800984_801121_801217_801366_801444_801625_801964_802091_802194_802397_802542_802598_802681_802892_803173_803648_804093_804464_805178
transcript_2969.known	chr1	+	2737	6	FSM	ENSG00000162493.17	ENST00000621990.5	2737	6	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_5	164.449870781342	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGAGTCAGACTTTTGTT	13578955	True	NA	15	True	AATAAA	-19	NA	13583831	13617957	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_13584101_13607172_13607307_13610386_13610517_13613686_13613726_13614299_13614412_13615904
transcript_297.nnic	chr1	-	1925	10	NNC	ENSG00000279457.4	novel	1397	10	NA	NA	-4818	297	at_least_one_novel_splicesite	TRUE	canonical	3	18	junction_4	99.7921296285557	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACAGTGTGCTTTTAATA	-200147	False	NA	NA	False	AATAAA	-15	NA	200229	184919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_185351_185490_185560_186316_186470_187128_187288_187375_187578_187754_187891_188129_188267_188438_188585_188790_188890_199836
transcript_29706.nic	chr11	-	2983	16	NIC	ENSG00000177595.19	novel	2984	16	NA	NA	-51	0	combination_of_known_junctions	FALSE	canonical	2	53	junction_3	38.3643352897222	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCAGAGCTTGATTTATT	-805241	False	NA	-7	True	NA	NA	NA	805282	799184	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_799566_799814_800015_800130_800245_800383_800452_800542_800667_800761_800913_800984_801121_801217_801366_801444_801625_801964_802091_802194_802397_802542_802598_802681_802892_803173_803588_804093_804464_805178
transcript_2972.known	chr1	+	786	5	FSM	ENSG00000162493.17	ENST00000510906.5	786	5	0	0	0	0	multi-exon	FALSE	canonical	3	737	junction_4	47.3623004086584	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCGTGCCTGTAGTCTC	13578956	True	NA	NA	False	AATAGA	-26	NA	13583832	13614514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_13584101_13607172_13607307_13610386_13610517_13613686_13613726_13614299
transcript_29773.known	chr11	-	2640	10	FSM	ENSG00000177542.11	ENST00000628067.3	2640	10	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_9	32.3377240241444	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTGTCTGTCTGGGGG	-794350	True	NA	-3	True	AATAAA	-18	NA	798281	790474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_792069_792141_792218_792303_792459_792552_792728_792869_792989_793528_793620_794457_794514_794775_794902_794986_795170_798216
transcript_29790.known	chr11	+	1680	1	FSM	ENSG00000288675.1	ENST00000678030.1	1680	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTGCAGTTTTGTTGCT	NA	False	NA	NA	False	AATAAA	-21	NA	797510	799190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_797500_799200
transcript_29791.known	chr11	-	2796	10	FSM	ENSG00000177542.11	ENST00000320230.9	2796	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_9	99.3031273984415	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTGTCTGTCTGGGGG	-794668	False	NA	-3	True	AATAAA	-18	NA	796263	790474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_792069_792141_792218_792303_792459_792552_792728_792869_792989_793528_793620_794457_794514_794775_794902_794986_795170_796042
transcript_29794.known	chr11	+	462	5	FSM	ENSG00000177600.9	ENST00000321153.9	462	5	0	0	0	0	multi-exon	FALSE	canonical	3	7240	junction_1	999.696078815957	3641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGTATTCCATGAGCACT	675407	True	NA	28	True	AATAAA	-18	NA	809966	812876	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_810040_810233_810358_811596_811646_812534_812634_812759
transcript_29801.known	chr11	+	353	4	FSM	ENSG00000177600.9	ENST00000532004.5	353	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4123.6359630253	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTCCATGAGCACTTTGT	675405	True	NA	32	True	AATAAA	-22	NA	809964	812880	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_810049_811596_811646_812534_812634_812759
transcript_29802.known	chr11	+	637	4	FSM	ENSG00000177600.9	ENST00000530797.5	637	4	0	0	0	0	multi-exon	FALSE	canonical	3	7720	junction_3	816.163518474631	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAAGTATTCCATGAGCA	675424	True	NA	26	True	AATAAA	-16	NA	809983	812874	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_810358_811596_811646_812534_812634_812759
transcript_29815.nic	chr11	+	2057	9	ISM	ENSG00000177666.17	ENST00000336615.9	2416	10	619	355	619	0	3prime_fragment	FALSE	canonical	3	114	junction_2	11.2465272417756	425	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGCCCACTTTGTGTGT	819221	False	NA	14	True	AATAAA	-14	NA	819532	825218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_819906_821627_821861_821957_822024_822396_822607_823526_823588_823693_823856_823997_824131_824313_824437_824522
transcript_29821.known	chr11	+	2166	9	FSM	ENSG00000177685.17	ENST00000525077.2	2166	9	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	149.459024484974	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGTCCTCCTGGGCCTTC	827792	False	NA	5	True	AATAAA	-15	NA	827918	831986	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_828773_828851_828964_829359_829541_829985_830133_830249_830338_830620_830714_830865_831033_831223_831296_831534
transcript_2983.known	chr1	+	2688	8	FSM	ENSG00000116731.23	ENST00000376048.9	2688	8	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_6	10.507528884819	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTGAGGAACAAGCCTGG	13699376	True	NA	NA	False	AATAAA	-14	NA	13700239	13825065	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_13700301_13715540_13715615_13730999_13731118_13732778_13732883_13742004_13742158_13749360_13749488_13816426_13816571_13823158
transcript_29832.known	chr11	+	1663	8	FSM	ENSG00000177685.17	ENST00000450448.5	1663	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	152.149228572156	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCCTGGGCCTTCCGTGT	828133	False	NA	10	True	AATAAA	-20	NA	828259	831991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_828773_828851_828964_829359_829541_829985_830133_830249_830338_830620_830714_831223_831296_831534
transcript_29861.known	chr11	+	1545	9	FSM	ENSG00000177697.19	ENST00000397420.9	1545	9	0	0	0	0	multi-exon	TRUE	canonical	3	190	junction_1	88.9634756515279	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACGAGCTCGCTGTGCTG	828996	True	NA	7	True	AATAAA	-16	NA	832951	838831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_833027_834529_834592_836062_836154_836250_836443_836768_836844_837249_837355_837459_837619_837941_838029_838132
transcript_29864.known	chr11	+	1835	8	FSM	ENSG00000177697.19	ENST00000532045.6	1835	8	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_1	94.1949779847685	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCTCGCTGTGCTGGTAA	829036	True	NA	11	True	AATAAA	-20	NA	832991	838835	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_833027_834529_834592_836062_836154_836250_836844_837249_837355_837459_837619_837941_838029_838132
transcript_29865.known	chr11	+	1486	8	FSM	ENSG00000177697.19	ENST00000397421.5	1486	8	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	111.882226707647	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGCTCGCTGTGCTGGTA	828996	True	NA	10	True	AATAAA	-19	NA	832951	838834	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_833027_836062_836154_836250_836443_836768_836844_837249_837355_837459_837619_837941_838029_838132
transcript_29870.known	chr11	-	876	2	FSM	ENSG00000177700.6	ENST00000322028.5	876	2	0	0	0	0	multi-exon	FALSE	canonical	3	3246	junction_1	0	234	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAACTGTGTTTGCACCAC	-794488	True	NA	-3	True	GGGGCT	-42	NA	842529	839720	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_840481_842413
transcript_29876.known	chr11	+	1379	9	FSM	ENSG00000214063.12	ENST00000397397.7	1379	9	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	168.67850337254	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGCGTCTATTGCTCGTC	838838	True	NA	14	True	AATAAA	-14	NA	842851	867111	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_842916_847200_847301_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_29878.known	chr11	+	1430	9	FSM	ENSG00000214063.12	ENST00000397408.5	1430	9	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	217.460341211909	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTATTGCTCGTCTGCCT	838927	True	NA	19	True	AATAAA	-19	NA	842940	867116	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_843051_847200_847301_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_29879.nic	chr11	+	2079	9	NIC	ENSG00000214063.12	novel	1379	9	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	2	17	junction_1	237.323849149216	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGCGTCTATTGCTCGTC	838892	True	NA	14	True	AATAAA	-14	NA	842905	867111	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_843670_847200_847301_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_29882.known	chr11	+	1462	9	FSM	ENSG00000214063.12	ENST00000397404.5	1462	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	242.711763208955	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTATTGCTCGTCTGCCT	844188	False	NA	19	True	AATAAA	-19	NA	844445	867116	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_844588_847200_847301_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_29883.known	chr11	+	1426	9	FSM	ENSG00000214063.12	ENST00000397406.5	1426	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	235.108485597607	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTATTGCTCGTCTGCCT	844015	False	NA	19	True	AATAAA	-19	NA	844080	867116	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_844187_847200_847301_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_29889.known	chr11	+	1332	8	FSM	ENSG00000214063.12	ENST00000397396.5	1332	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	276.127669377624	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTATTGCTCGTCTGCCT	842805	False	NA	19	True	AATAAA	-19	NA	842823	867116	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_842916_847200_847301_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_29890.known	chr11	+	1025	8	FSM	ENSG00000214063.12	ENST00000397411.6	1025	8	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	241.372774617459	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCCCCCCTGGGAGGGGT	842793	True	NA	NA	False	NA	NA	NA	842811	866817	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_842916_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_29899.known	chr11	+	834	8	FSM	ENSG00000214063.12	ENST00000525201.5	834	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	318.053197963319	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGCACCCACAGCTGCC	844087	False	NA	NA	False	NA	NA	NA	844152	866676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_844187_847200_847301_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_29904.nic	chr11	+	1700	7	FSM	ENSG00000214063.12	ENST00000527644.2	1687	7	-13	0	-13	0	multi-exon	FALSE	canonical	3	691	junction_2	33.1934565171444	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGCGTCTATTGCTCGTC	847018	True	NA	14	True	AATAAA	-14	NA	849802	867111	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_29920.known	chr11	-	1477	14	FSM	ENSG00000177830.18	ENST00000436108.6	1477	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	255.784163820864	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACGGGTCTGCTGCAGT	-903355	True	NA	-17	True	AATACA	-19	NA	910831	869766	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_869957_870120_870164_870418_870500_883147_883304_884067_884170_893426_893520_899339_899402_900003_900111_900935_900981_902197_902331_902961_903112_904705_904860_908541_908646_910774
transcript_29928.known	chr11	-	3260	13	FSM	ENSG00000177830.18	ENST00000323578.13	3260	13	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_12	128.784919752103	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGCTTTGTGCTGCCAG	-903334	True	NA	NA	False	NA	NA	NA	910810	867858	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_869957_870120_870164_870418_870500_883147_883304_884067_884170_893426_893520_899339_899402_900003_900111_900935_900981_902197_902331_902961_903112_904705_904860_910774
transcript_29936.nic	chr11	-	1414	13	NIC	ENSG00000177830.18	novel	1477	14	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	292.388250257921	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTCTGCTGCAGTCCTCA	-903380	True	NA	-12	True	AATACA	-24	NA	910856	869761	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_869957_870120_870164_870418_870500_883147_883304_884067_884170_899339_899402_900003_900111_900935_900981_902197_902331_902961_903112_904705_904860_908541_908646_910774
transcript_29943.known	chr11	-	1289	12	FSM	ENSG00000177830.18	ENST00000429789.6	1289	12	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_5	194.016783801542	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTCTGCTGCAGTCCTCA	-903359	True	NA	-12	True	AATACA	-24	NA	910835	869761	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_869957_870120_870164_870418_870500_883147_883304_884067_884170_899339_899402_900003_900111_900935_900981_902197_902331_902961_903112_904705_904860_910774
transcript_2996.known	chr1	+	628	6	FSM	ENSG00000116731.23	ENST00000484063.6	628	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	14.8458748479165	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCTCCCCCAAGAGCCGG	13699334	True	NA	NA	False	NA	NA	NA	13700197	13749463	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_13700301_13715540_13715615_13730999_13731118_13732778_13732856_13742004_13742158_13749360
transcript_29968.known	chr11	+	4587	22	FSM	ENSG00000183020.15	ENST00000448903.7	4587	22	0	0	0	0	multi-exon	FALSE	canonical	2	112	junction_17	26.4050946777949	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGATCACGCGCTTTCT	918461	True	NA	9	True	AATAAA	-14	NA	925869	1012240	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_926089_959436_959506_970168_970312_972061_972256_977094_977225_981197_981300_984644_984754_985434_985583_986784_986954_988551_988690_992502_992686_993283_993382_993753_993986_994071_994246_1000431_1000599_1003721_1003805_1006527_1006618_1008011_1008136_1009099_1009217_1009327_1009398_1009682_1009818_1010547
transcript_29974.known	chr11	+	3072	21	FSM	ENSG00000183020.15	ENST00000528815.5	3072	21	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_14	45.2906171298206	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGGCGTGAACGTGGCG	918491	True	NA	29	True	ATTAAA	-11	NA	925899	1010919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_926089_959436_959506_970168_970312_972061_972256_977094_977225_981197_981300_984644_984754_985431_985583_986784_986954_988551_988690_992502_992686_993283_993382_993753_993986_994071_994246_1003721_1003805_1006527_1006618_1008011_1008136_1009099_1009217_1009327_1009398_1009682_1009818_1010547
transcript_29996.known	chr11	-	3627	6	FSM	ENSG00000078902.16	ENST00000317204.11	3627	6	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_5	15.1182009511714	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTTTGTTCCCGAGTAT	-1306373	True	NA	-1	True	AATAAA	-21	NA	1309632	1274370	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_1277254_1286001_1286093_1288623_1288777_1290226_1290410_1295644_1295795_1309465
transcript_29998.known	chr11	+	939	1	FSM	ENSG00000255153.1	ENST00000530897.1	939	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGGACTGGCCTGGAA	1309595	True	NA	5	True	AATAAA	-16	NA	1309768	1310707	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_1309800_1310700
transcript_3.known	ERCC-00004	+	507	1	FSM	ERCC-00004A	DQ516752	507	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3935	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	GATAAA	-39	NA	0	507	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00004_+_0_500
transcript_30.known	ERCC-00076	+	626	1	FSM	ERCC-00076A	DQ883650	626	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	182	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	626	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00076_+_0_600
transcript_3000.known	chr1	+	6175	4	FSM	ENSG00000116731.23	ENST00000413440.5	6175	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	11.3431330181157	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGAAAGGACTGCATTT	13748235	True	NA	12	True	AATAAA	-15	NA	13749402	13788079	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_13749488_13773077_13773189_13778417_13782832_13786514
transcript_30002.known	chr11	+	4089	20	FSM	ENSG00000174672.16	ENST00000308219.13	4089	20	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_18	22.5280373173954	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCGACGCAGGTCTTCA	1389885	False	NA	6	True	AATAAA	-14	NA	1389898	1462685	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_1390376_1436039_1436135_1438305_1438392_1440787_1440929_1442489_1442607_1443105_1443140_1443334_1443404_1443488_1443636_1444970_1445003_1445293_1445459_1445570_1445669_1445756_1445908_1449775_1449837_1450586_1450795_1451370_1451420_1454484_1454609_1456347_1456529_1456597_1456688_1459191_1459240_1460969
transcript_30005.known	chr11	-	1745	5	FSM	ENSG00000182208.15	ENST00000329957.7	1745	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	39.1687056206865	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGTGTACGTCTCAGC	NA	False	NA	-7	True	AATAAA	-19	NA	1486779	1469456	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_1470489_1471294_1471420_1480392_1480487_1480724_1480886_1486446
transcript_30008.known	chr11	-	2228	10	FSM	ENSG00000250644.3	ENST00000636615.1	2228	10	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	446.897204188067	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATACCCATGCAGCTCC	-1755188	True	NA	-21	True	NA	NA	NA	1763954	1734820	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_1735430_1747666_1748120_1753802_1753902_1753993_1754139_1754905_1755029_1757323_1757557_1758968_1759088_1759515_1759640_1761308_1761469_1763791
transcript_30009.known	chr11	-	1597	9	FSM	ENSG00000117984.15	ENST00000637387.1	1597	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	359.791063500749	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGTATCCTGGGGCTCCC	-1755175	True	NA	NA	False	NA	NA	NA	1763941	1753205	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_1753671_1753802_1753881_1753993_1754139_1754905_1755029_1757323_1757557_1758968_1759088_1759515_1759640_1761308_1761469_1763791
transcript_30015.known	chr11	-	1512	9	FSM	ENSG00000117984.15	ENST00000636843.1	1512	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	358.914944659595	4049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTGCCTGTCTGTCTC	-1755182	True	NA	NA	False	NA	NA	NA	1763948	1753312	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_1753671_1753802_1753902_1753993_1754139_1754905_1755029_1757323_1757557_1758968_1759088_1759515_1759634_1761308_1761469_1763791
transcript_30016.known	chr11	-	2198	9	FSM	ENSG00000117984.15	ENST00000678991.1	2198	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	353.795138462925	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGGTGTGCTCTTGTG	-1755161	True	NA	-5	True	AATACA	-25	NA	1763927	1752754	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_1753671_1753802_1753902_1753993_1754139_1754905_1755029_1757323_1757557_1758968_1759088_1759515_1759640_1761308_1761612_1763791
transcript_30027.known	chr11	-	4408	8	FSM	ENSG00000117984.15	ENST00000637381.2	4408	8	0	0	0	0	multi-exon	FALSE	canonical	3	1031	junction_6	17.9432211064087	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTCTGTGCTGGTGTGC	-1755198	True	NA	-12	True	AATACA	-18	NA	1763964	1752761	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_1753671_1753802_1753902_1753993_1754139_1754905_1755029_1757323_1757557_1758968_1759088_1759515_1759640_1761308
transcript_30028.known	chr11	+	613	6	FSM	ENSG00000214026.11	ENST00000397297.7	613	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	742.135297637836	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTCCAGGTGGAGCTGC	1928370	True	NA	NA	False	NA	NA	NA	1947331	1984522	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_1947380_1950898_1951022_1952126_1952210_1952781_1952856_1972558_1972759_1984437
transcript_30029.known	chr11	+	673	5	FSM	ENSG00000214026.11	ENST00000397298.8	673	5	0	0	0	0	multi-exon	FALSE	canonical	3	1139	junction_4	247.185658969124	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCGGAAGCTCTGCTTCC	1928370	True	NA	15	True	AATAAA	-20	NA	1947331	1956600	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_1947380_1950898_1951022_1952126_1952210_1952781_1952856_1956255
transcript_3003.known	chr1	+	3838	8	FSM	ENSG00000189337.17	ENST00000361144.9	3838	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	7.40104791256493	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGAATTCTATGTTATTTGA	14923659	True	NA	13	True	AATAAA	-19	NA	14924129	15068152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_14924573_14960683_14960876_15034748_15034886_15043988_15044160_15056090_15056281_15060171_15060303_15063571_15063623_15065629
transcript_30030.known	chr11	-	2348	5	FSM	ENSG00000130600.20	ENST00000414790.7	2353	5	0	5	0	0	multi-exon	FALSE	canonical	2	9	junction_4	16.2845785944863	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTCGAGGACTCTGGA	-1997750	False	NA	NA	False	AATAAA	-15	NA	1997875	1995175	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_1995795_1995875_1995999_1996078_1996192_1996286_1996422_1996517
transcript_30031.known	chr11	-	1485	2	FSM	ENSG00000183734.5	ENST00000331289.5	1485	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGGCTCCTATCACCTA	-2270549	False	NA	-2	True	AATAAA	-14	NA	2270588	2268497	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_2269127_2269732
transcript_30038.known	chr11	-	1460	3	FSM	ENSG00000238184.1	ENST00000413483.1	1460	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCTGTGTGCATTAGTC	-2377634	True	NA	NA	False	AATACA	-14	NA	2377992	2328748	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_2329693_2334910_2335020_2377585
transcript_3004.known	chr1	+	1843	4	FSM	ENSG00000171729.14	ENST00000376014.7	1843	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.1529071070248	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGGTACACTTAACTAGT	15152496	True	NA	NA	False	NA	NA	NA	15152565	15220339	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_15152785_15210489_15210563_15214894_15215432_15219325
transcript_30040.known	chr11	-	435	1	FSM	ENSG00000236264.5	ENST00000453533.1	435	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATAGAACCTGTTGTGCA	-2335685	False	NA	NA	False	TATAAA	-28	NA	2335749	2335314	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_2335300_2335700
transcript_30041.known	chr11	+	1482	8	FSM	ENSG00000110651.12	ENST00000263645.10	1482	8	0	0	0	0	multi-exon	FALSE	canonical	3	1233	junction_1	133.55225225219	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCCTGTGCAGTCCCTC	2371670	True	NA	30	True	AATAAA	-22	NA	2377309	2397397	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_2377616_2390411_2390527_2394094_2394193_2394971_2395047_2395415_2395521_2395868_2395971_2396627_2396715_2396803
transcript_30046.known	chr11	+	1544	4	FSM	ENSG00000184281.15	ENST00000380996.9	1544	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	103.704708989836	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTCTATCTGGGCCC	2400463	False	NA	15	True	AATAAA	-21	NA	2400487	2403878	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_2400799_2402293_2402451_2402610_2402653_2402844
transcript_30047.known	chr11	+	851	4	FSM	ENSG00000184281.15	ENST00000440813.1	851	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	124.980887427727	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCACCATGGAGGCCTGC	2399009	False	NA	NA	False	NA	NA	NA	2402099	2403448	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_2402148_2402293_2402451_2402610_2402653_2402844
transcript_30048.known	chr11	+	863	4	FSM	ENSG00000184281.15	ENST00000435795.5	863	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	138.348191973087	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAGCATGAGTGACAACG	2397672	True	NA	NA	False	NA	NA	NA	2400762	2402971	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_2400799_2401838_2402148_2402293_2402451_2402610
transcript_30051.known	chr11	+	1472	3	FSM	ENSG00000184281.15	ENST00000333256.11	1472	3	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_1	62	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGTGTCTATCTGGGC	2397659	True	NA	13	True	AATAAA	-19	NA	2400749	2403876	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_2400799_2402293_2402451_2402610
transcript_30052.nic	chr11	+	3026	3	ISM	ENSG00000184281.15	ENST00000440813.1	851	4	-1556	-427	56	0	intron_retention	FALSE	canonical	3	37	junction_1	137.5	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTTGTGTCTATCTGGG	2400489	True	NA	12	True	AATAAA	-18	NA	2400543	2403875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_2402148_2402293_2402451_2402610
transcript_30053.known	chr11	+	979	3	FSM	ENSG00000184281.15	ENST00000485682.6	979	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	154.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCCACACCAGCATGAGT	2397927	False	NA	NA	False	NA	NA	NA	2401017	2402964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_2401486_2402293_2402451_2402610
transcript_30054.known	chr11	+	1423	2	FSM	ENSG00000184281.15	ENST00000451491.2	1423	2	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTTGTGTCTATCTGGG	2399202	False	NA	12	True	AATAAA	-18	NA	2402292	2403875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_2402451_2402610
transcript_30055.known	chr11	+	3224	16	FSM	ENSG00000053918.18	ENST00000155840.12	3224	16	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_11	4.77214137817954	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTATGTCCGTGTACTGAG	2444816	True	NA	NA	False	NA	NA	NA	2445007	2849105	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_2445485_2527927_2528019_2570627_2570755_2571324_2571404_2572012_2572110_2572845_2572987_2583434_2583546_2585211_2585308_2587569_2587693_2588712_2588855_2661960_2662082_2768843_2768920_2775959_2776055_2776985_2777033_2777975_2778038_2847766
transcript_3006.known	chr1	+	1861	4	FSM	ENSG00000171729.14	ENST00000434578.6	1861	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	15.9234278833282	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAAGAAAACTGTA	15153241	True	NA	-54	True	NA	NA	NA	15153767	15220393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_15153955_15210489_15210563_15214894_15215432_15219329
transcript_30061.known	chr11	-	775	4	FSM	ENSG00000129757.15	ENST00000647251.1	775	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	72.2234187935065	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAAAAGGAA	-2885714	False	NA	-65	True	TATAAA	-39	NA	2885728	2883631	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_2883911_2883998_2884135_2885201_2885467_2885633
transcript_30068.known	chr11	+	1543	11	FSM	ENSG00000110628.16	ENST00000649076.2	1543	11	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	12.5857061780418	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTCCGGCCTGGTTTCT	2901600	True	NA	8	True	AATAAA	-21	NA	2902277	2925246	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_2902365_2903213_2903490_2908232_2908331_2909195_2909357_2909577_2909711_2916621_2916741_2917987_2918096_2919306_2919408_2922101_2922204_2922435_2922557_2925009
transcript_30076.known	chr11	+	1225	9	FSM	ENSG00000110628.16	ENST00000449793.6	1225	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	27.8702350187436	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTACTAAATCCCTCCGAC	2901605	True	NA	-11	True	AATAAA	-2	NA	2902282	2925227	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_2902365_2903213_2903490_2908232_2908331_2916621_2916741_2917987_2918096_2919306_2919408_2922101_2922204_2922435_2922557_2925009
transcript_30078.known	chr11	+	1542	11	FSM	ENSG00000110628.16	ENST00000347936.6	1542	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	26.406249260355	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTCCGGCCTGGTTTCT	NA	False	NA	8	True	AATAAA	-21	NA	2899720	2925246	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_2899807_2903213_2903490_2908232_2908331_2909195_2909357_2909577_2909711_2916621_2916741_2917987_2918096_2919306_2919408_2922101_2922204_2922435_2922557_2925009
transcript_30079.known	chr11	-	920	2	FSM	ENSG00000181649.8	ENST00000314222.5	920	2	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	0	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCTGGTCCACACCCTC	NA	False	NA	-2	True	AATAAA	-18	NA	2929420	2928272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_2928668_2928895
transcript_3008.known	chr1	+	1842	3	FSM	ENSG00000171729.14	ENST00000400796.7	1842	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	13	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAGGAAATGTTCTTTTT	15153206	True	NA	-39	True	AAAAAG	-15	NA	15153732	15220408	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_15153955_15214894_15215432_15219325
transcript_3010.known	chr1	-	3126	3	FSM	ENSG00000175147.13	ENST00000669314.1	3126	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGACTTCATCTCAAAAAAAA	-15153569	True	NA	NA	False	NA	NA	NA	15153618	15119407	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_15121060_15124227_15124374_15152290
transcript_30127.known	chr11	-	1941	16	FSM	ENSG00000205531.13	ENST00000526115.5	1941	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	564.372863352668	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGCTGTGTAGAGTAGGG	-2977383	True	NA	NA	False	NA	NA	NA	2992377	2945111	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_2945647_2951258_2951316_2951779_2951810_2954526_2954647_2955743_2955767_2958398_2958545_2959769_2959910_2964679_2964752_2969802_2969935_2971447_2971535_2972101_2972244_2976023_2976124_2978283_2978343_2979206_2979238_2989128_2989272_2992253
transcript_3013.known	chr1	+	2422	4	FSM	ENSG00000142634.13	ENST00000375980.9	2422	4	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_3	20.9973543306982	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATGGTTCTTGATG	15405647	True	NA	18	True	GATAAA	-15	NA	15409887	15430339	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_15410280_15425870_15426019_15427149_15427285_15428592
transcript_30140.known	chr11	-	2463	16	FSM	ENSG00000205531.13	ENST00000380542.9	2463	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	509.580699093764	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGCACTGTGCCATGTGG	-2977335	True	NA	-10	True	ATTAAA	-16	NA	2992329	2944436	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_2945647_2949226_2949265_2951258_2951316_2951779_2951810_2954526_2954647_2955743_2955767_2958398_2958545_2959769_2959910_2964679_2964752_2969802_2969935_2971447_2971535_2972101_2972244_2976023_2976124_2978283_2978343_2979206_2979238_2992253
transcript_3015.nnic	chr1	+	2162	3	NIC	ENSG00000142634.13	novel	2422	4	NA	NA	-8	-133	combination_of_known_splicesites	FALSE	canonical	3	47	junction_2	152.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTTTTGCTTCTTTTTTC	15405639	True	NA	15	True	TATAAA	-16	NA	15409879	15430206	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_15410280_15425870_15426019_15428592
transcript_30152.nic	chr11	-	2811	15	NIC	ENSG00000205531.13	novel	2479	15	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	496.379529951732	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGCCATGTGGGTCTTT	-2977255	True	NA	-4	True	ATTAAA	-22	NA	2992249	2944430	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_2945647_2951258_2951316_2951779_2951810_2954526_2954647_2955743_2955767_2958398_2958545_2959769_2959910_2964679_2964752_2969802_2969935_2971447_2971535_2972101_2972244_2976023_2976124_2978283_2978343_2979206_2979238_2991793
transcript_30154.known	chr11	-	2479	15	FSM	ENSG00000205531.13	ENST00000620138.4	2479	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	407.952678328139	2561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGCCATGTGGGTCTTT	-2977383	True	NA	-4	True	ATTAAA	-22	NA	2992377	2944430	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_2945647_2951258_2951316_2951779_2951810_2954526_2954647_2955743_2955767_2958398_2958545_2959769_2959910_2964679_2964752_2969802_2969935_2971447_2971535_2972101_2972244_2976023_2976124_2978283_2978343_2979206_2979238_2992253
transcript_3016.nnic	chr1	+	2285	3	NIC	ENSG00000142634.13	novel	2422	4	NA	NA	-8	-10	combination_of_known_splicesites	FALSE	canonical	3	47	junction_2	152.5	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTCTTATGTGTGTATG	15405639	True	NA	8	True	GATAAA	-5	NA	15409879	15430329	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_15410280_15425870_15426019_15428592
transcript_30162.nic	chr11	-	2564	15	NIC	ENSG00000205531.13	novel	2479	15	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	506.551506336156	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGCCATGTGGGTCTTT	NA	False	NA	-4	True	ATTAAA	-22	NA	2992426	2944430	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_2945647_2951258_2951316_2951779_2951810_2954526_2954647_2955743_2955767_2958398_2958545_2959769_2959910_2964679_2964752_2969802_2969935_2971447_2971535_2972101_2972280_2976023_2976124_2978283_2978343_2979206_2979238_2992253
transcript_3019.known	chr1	-	2808	9	FSM	ENSG00000132906.18	ENST00000333868.10	2808	9	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_5	21.540659228538	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTTGCATAGTTGTCA	-15521926	True	NA	-10	True	AATAAA	-14	NA	15524215	15491400	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_15493036_15493891_15494002_15495272_15495453_15504610_15504759_15505989_15506080_15506898_15507076_15507872_15507908_15518109_15518396_15524068
transcript_3020.known	chr1	-	1878	9	FSM	ENSG00000132906.18	ENST00000400777.7	1878	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	44.181444068749	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATCTATGAATTCTAAGT	-15521903	True	NA	-96	True	NA	NA	NA	15524192	15492365	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_15493036_15493891_15494002_15495272_15495453_15504610_15504759_15505989_15506080_15506898_15507134_15507872_15507908_15518109_15518396_15524068
transcript_30203.known	chr11	-	2737	23	FSM	ENSG00000110619.18	ENST00000380525.9	2737	23	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_21	152.40881978123	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCTCTCTGTCTTGTTCT	-3049797	True	NA	-9	True	AATAAA	-17	NA	3057423	3000928	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_3001249_3001969_3002054_3002540_3002601_3005365_3005434_3006878_3006960_3012194_3012277_3015780_3015850_3017105_3017296_3017856_3017955_3018407_3018512_3018619_3018750_3019138_3019268_3020219_3020333_3026675_3026798_3028995_3029085_3029302_3029444_3038049_3038200_3039193_3039293_3039834_3039932_3040895_3040985_3042164_3042257_3047752_3048002_3057342
transcript_30204.known	chr11	-	2805	23	FSM	ENSG00000110619.18	ENST00000531387.5	2805	23	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_20	182.198607691245	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTGTTCTGCATGTT	-3049811	True	NA	-2	True	AATAAA	-24	NA	3057437	3000921	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_3001249_3001969_3002054_3002540_3002601_3005365_3005434_3006878_3006960_3012194_3012277_3015780_3015850_3017105_3017296_3017856_3017955_3018407_3018512_3018619_3018750_3019138_3019268_3020219_3020333_3026675_3026798_3028995_3029085_3029302_3029444_3038049_3038200_3039193_3039293_3039834_3039932_3040895_3041032_3042164_3042257_3047752_3048002_3057342
transcript_30207.known	chr11	-	2491	22	FSM	ENSG00000110619.18	ENST00000278224.13	2491	22	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	94.7829600920414	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCTCTCTGTCTTGTTCT	-3049792	True	NA	-9	True	AATAAA	-17	NA	3057418	3000928	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_3001249_3001961_3002054_3002540_3002601_3005365_3005434_3006878_3006960_3012194_3012277_3015780_3015850_3017105_3017296_3017856_3017955_3018407_3018512_3018619_3018750_3019138_3019268_3020219_3020333_3026675_3026798_3028995_3029085_3029302_3029444_3038049_3038200_3039193_3039293_3039834_3039932_3040895_3040985_3042164_3042257_3057342
transcript_30208.nic	chr11	-	2589	22	NIC	ENSG00000110619.18	novel	2805	23	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_20	124.572629963626	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCCTCTCTGTCTTGTTC	-3049852	False	NA	-10	True	AATAAA	-16	NA	3057478	3000929	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_3001249_3001969_3002054_3002540_3002601_3005365_3005434_3006878_3006960_3012194_3012277_3015780_3015850_3017105_3017296_3017856_3017955_3018407_3018512_3018619_3018750_3019138_3019268_3020219_3020333_3026675_3026798_3028995_3029085_3029302_3029444_3038049_3038200_3039193_3039293_3039834_3039932_3040895_3041032_3042164_3042257_3057342
transcript_30227.known	chr11	-	2685	22	FSM	ENSG00000110619.18	ENST00000397111.9	2685	22	0	0	0	0	multi-exon	FALSE	canonical	3	434	junction_1	53.3082423972409	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTGTTCTGCATGTT	NA	False	NA	-2	True	AATAAA	-24	NA	3057613	3000921	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_3001249_3001969_3002054_3002540_3002601_3005365_3005434_3006878_3006960_3012194_3012277_3015780_3015850_3017105_3017296_3017856_3017955_3018407_3018512_3018619_3018750_3019138_3019268_3020219_3020333_3026675_3026798_3028995_3029085_3029302_3029444_3038049_3038200_3039193_3039293_3039834_3039932_3040895_3040985_3042164_3042257_3057342
transcript_30229.nic	chr11	-	2330	20	ISM	ENSG00000110619.18	ENST00000380525.9	2737	23	-55	4435	-37	-4434	5prime_fragment	FALSE	canonical	3	85	junction_18	160.313456803018	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTAAAGTGAAAATGACTT	-3049852	False	NA	NA	False	ATTAAA	-25	NA	3057478	3005363	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_3005434_3006878_3006960_3012194_3012277_3015780_3015850_3017105_3017296_3017856_3017955_3018407_3018512_3018619_3018750_3019138_3019268_3020219_3020333_3026675_3026798_3028995_3029085_3029302_3029444_3038049_3038200_3039193_3039293_3039834_3039932_3040895_3040985_3042164_3042257_3047752_3048002_3057342
transcript_30241.known	chr11	-	3854	22	FSM	ENSG00000021762.20	ENST00000263650.12	3854	22	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_14	7.10402140913201	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTGGAAACGAGAGGAGG	-3164565	True	NA	1	True	AATAAA	-31	NA	3165310	3087106	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_3088344_3089845_3089949_3090557_3090697_3092431_3092559_3092866_3093053_3093526_3093664_3093745_3093836_3094236_3094335_3100157_3100257_3101602_3101700_3102182_3102282_3103238_3103321_3104192_3104378_3107262_3107456_3107770_3107946_3119546_3119632_3120420_3120625_3121996_3122099_3122347_3122429_3126472_3126556_3129012_3129170_3165215
transcript_30245.known	chr11	-	2798	21	FSM	ENSG00000021762.20	ENST00000348039.9	2798	21	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_16	9.99737465537828	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTTCCGCCCAGCGCTGG	-3164607	True	NA	NA	False	NA	NA	NA	3165352	3088000	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_3088344_3089845_3089949_3090557_3090697_3092431_3092559_3092866_3093053_3093526_3093664_3093745_3093836_3094236_3094335_3100157_3100257_3101602_3101700_3102182_3102282_3103238_3103321_3104192_3104378_3107262_3107456_3107770_3107946_3119546_3119632_3121996_3122099_3122347_3122429_3126472_3126556_3129012_3129170_3165215
transcript_3025.known	chr1	-	1621	5	FSM	ENSG00000132906.18	ENST00000348549.9	1621	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	50.4058528347651	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTATTTCTTCCCTC	-15522058	True	NA	0	True	AATAAA	-23	NA	15524347	15492269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_15493036_15493891_15494002_15495272_15495453_15518109_15518396_15524068
transcript_30256.known	chr11	-	891	7	FSM	ENSG00000005801.18	ENST00000528218.5	891	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	140.212537084084	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTTTCAAATGTCAAGAAT	-3372653	True	NA	33	True	AATATA	-18	NA	3379138	3360282	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_3360566_3361742_3361890_3362545_3362603_3370974_3371071_3371576_3371704_3373576_3373657_3379037
transcript_3026.known	chr1	+	6034	15	FSM	ENSG00000116138.13	ENST00000375847.8	6034	15	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	7.66651877999928	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGGGTAGCCCTTGCAT	15524631	True	NA	23	True	AATAAA	-20	NA	15526847	15571733	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_15526959_15529087_15529273_15534236_15534304_15536474_15536815_15544398_15544584_15546766_15546872_15548269_15548429_15559525_15559657_15562141_15562326_15563928_15564112_15564282_15564360_15565918_15566000_15566081_15566181_15567098_15567270_15567777
transcript_30262.known	chr11	-	2008	6	FSM	ENSG00000005801.18	ENST00000526601.5	2008	6	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	138.743792653942	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAACAAATATAA	-3372661	True	NA	-55	True	NA	NA	NA	3379146	3359116	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_3360566_3361742_3361890_3370974_3371071_3371576_3371704_3373576_3373657_3379037
transcript_30268.known	chr11	-	2389	6	FSM	ENSG00000005801.18	ENST00000429541.6	2389	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	168.639259960426	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAATTATACTAGATGGAA	-3372733	True	NA	63	True	AATATA	-43	NA	3379218	3358944	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_3360566_3370974_3371071_3371576_3371704_3373576_3373657_3377616_3377901_3379037
transcript_30269.known	chr11	-	1018	6	FSM	ENSG00000005801.18	ENST00000438262.6	1018	6	0	0	0	0	multi-exon	FALSE	canonical	2	34	junction_1	148.261390793423	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTCCCACCTTACTGA	-3372641	True	NA	NA	False	NA	NA	NA	3379126	3359996	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_3360566_3362545_3362603_3370974_3371071_3371576_3371704_3373576_3373657_3379037
transcript_30276.known	chr11	-	3187	6	FSM	ENSG00000005801.18	ENST00000399602.9	3187	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	175.455521429221	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGTCTCTTCATCCTT	-3372661	True	NA	-14	True	AATAAA	-15	NA	3379146	3357926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_3360566_3360719_3360789_3361742_3361890_3370974_3371071_3371576_3371704_3379037
transcript_30280.known	chr11	-	2021	5	FSM	ENSG00000005801.18	ENST00000005082.13	2021	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	161.001552787543	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATAAGTCTCCAGAGCA	-3372631	True	NA	14	True	AATAAA	-40	NA	3379116	3358993	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_3360566_3361742_3361890_3370974_3371071_3371576_3371704_3379037
transcript_30281.nic	chr11	-	2662	5	NIC	ENSG00000005801.18	novel	2389	6	NA	NA	0	-285	combination_of_known_junctions	FALSE	canonical	3	104	junction_4	148.627050027914	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTGTGGTTGTTTTAT	-3372733	True	NA	-6	True	AGTAAA	-15	NA	3379218	3358387	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_3360566_3370974_3371071_3371576_3371704_3373576_3373657_3379037
transcript_30284.nic	chr11	-	2487	5	NIC	ENSG00000005801.18	novel	2389	6	NA	NA	0	382	combination_of_known_junctions	FALSE	canonical	3	104	junction_4	148.627050027914	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTAGATGCTGTGTCTTC	-3372733	True	NA	-2	True	NA	NA	NA	3379218	3358562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_3360566_3370974_3371071_3371576_3371704_3373576_3373657_3379037
transcript_30289.nic	chr11	-	1956	5	NIC	ENSG00000005801.18	novel	2389	6	NA	NA	0	23	combination_of_known_junctions	FALSE	canonical	3	104	junction_4	148.627050027914	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGCAAAGCCGTTAGTATC	-3372733	True	NA	-32	True	AATAAA	-13	NA	3379218	3359093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_3360566_3370974_3371071_3371576_3371704_3373576_3373657_3379037
transcript_30296.known	chr11	-	2970	4	FSM	ENSG00000005801.18	ENST00000354599.10	2970	4	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_3	40.2326567189723	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGTCTCTTCATCCTT	-3372660	True	NA	-14	True	AATAAA	-15	NA	3379145	3357926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_3360566_3370974_3371071_3371576_3371704_3379037
transcript_30305.known	chr11	-	486	5	FSM	ENSG00000005801.18	ENST00000330692.11	486	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	163.538986177608	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTATATCTGTGAGGTGGA	-3372661	True	NA	NA	False	NA	NA	NA	3379146	3363317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_3363392_3370974_3371071_3371576_3371704_3373576_3373657_3379037
transcript_3031.known	chr1	+	5882	14	FSM	ENSG00000116138.13	ENST00000616884.4	5882	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	15.4720591837226	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTATGGGGTAGCCCTTGC	NA	False	NA	21	True	AATAAA	-18	NA	15526812	15571731	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_15526959_15534236_15534304_15536474_15536815_15544398_15544584_15546766_15546872_15548269_15548429_15559525_15559657_15562141_15562326_15563928_15564112_15564282_15564360_15565918_15566000_15566081_15566181_15567098_15567270_15567777
transcript_30319.nnic	chr11	+	1695	13	NIC	ENSG00000223756.8	novel	1600	12	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	3	45	junction_4	37.0347997009419	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGTGCTTGGCTCTGA	3374641	True	NA	14	True	AATGAA	-18	NA	3380936	3408978	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_3381045_3383461_3383547_3384166_3384285_3384898_3384969_3397116_3397407_3401758_3401868_3402612_3402730_3402914_3402957_3403592_3403653_3404853_3404964_3406498_3406716_3407621_3407698_3408685
transcript_3033.known	chr1	-	3095	7	FSM	ENSG00000116771.6	ENST00000375826.4	3095	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	4.81894409826699	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTGTAATCTTAAAATAAC	-15584210	True	NA	-33	True	ATTAAA	-21	NA	15585051	15571698	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_15573725_15574756_15574842_15577684_15577865_15578858_15579055_15580093_15580143_15583192_15583396_15584695
transcript_30335.known	chr11	-	1232	4	FSM	ENSG00000167311.14	ENST00000397068.8	1232	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	4.32049379893857	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGGAATTTTATGATTG	-3641527	True	NA	-13	True	ATTAAA	-18	NA	3641992	3638511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_3638794_3639002_3639036_3639641_3640372_3641805
transcript_30338.known	chr11	-	7023	33	FSM	ENSG00000110713.17	ENST00000359171.8	7023	33	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_23	61.1858002189846	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGCTTTCCCTTTGTATT	NA	False	NA	-6	True	AATAAA	-25	NA	3797792	3675010	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_3676377_3676508_3676621_3679553_3679709_3683199_3683442_3685972_3686195_3691346_3691490_3693231_3693376_3695448_3695607_3699081_3699349_3700609_3700840_3702462_3702893_3705199_3705357_3706444_3706628_3712563_3712729_3713817_3713996_3719411_3719551_3720711_3720826_3723156_3723456_3725102_3725220_3731390_3731579_3735190_3735325_3744508_3744650_3753315_3753409_3760487_3760627_3762901_3763040_3768580_3768745_3771747_3771929_3773631_3773740_3775881_3776022_3778872_3779050_3779155_3779258_3782041_3782146_3797399
transcript_30339.known	chr11	-	6726	33	FSM	ENSG00000110713.17	ENST00000324932.12	6726	33	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_23	40.3451902337813	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGGTATTGGCTTTCCC	-3782127	True	NA	-14	True	AATAAA	-17	NA	3797554	3675018	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_3676377_3676508_3676621_3679553_3679709_3683199_3683442_3685972_3686195_3691346_3691490_3693231_3693376_3695448_3695607_3699081_3699349_3700609_3700840_3702462_3702893_3705199_3705357_3706444_3706628_3712563_3712729_3713817_3713996_3719411_3719551_3720711_3720826_3723156_3723456_3725102_3725220_3731390_3731579_3735190_3735325_3744508_3744650_3753315_3753409_3760538_3760627_3762901_3763040_3768580_3768745_3771747_3771929_3773631_3773740_3775881_3776022_3778872_3779050_3779155_3779258_3782041_3782146_3797399
transcript_30354.known	chr11	-	5628	32	FSM	ENSG00000110713.17	ENST00000355260.7	5628	32	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	64.7484205248117	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCTACCCTGGCCCTTT	-3797425	False	NA	69	True	NA	NA	NA	3797458	3675798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_3676377_3676508_3676621_3679553_3679709_3683199_3683442_3691346_3691490_3693231_3693376_3695448_3695607_3699081_3699349_3700609_3700840_3702462_3702893_3705199_3705357_3706444_3706628_3712563_3712729_3713817_3713996_3719411_3719551_3720711_3720826_3723156_3723456_3725102_3725220_3731390_3731579_3735190_3735325_3744508_3744650_3753315_3753409_3760538_3760627_3762901_3763040_3768580_3768745_3771747_3771929_3773631_3773740_3775881_3776022_3778872_3779050_3779155_3779258_3782041_3782146_3797399
transcript_30367.known	chr11	-	3698	20	FSM	ENSG00000110713.17	ENST00000397007.8	3698	20	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_10	65.8737565389588	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGGAGAATGTGTGTAT	-3782120	True	NA	-9	True	ATTAAA	-18	NA	3797547	3711834	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_3712729_3713817_3713996_3719411_3719551_3720711_3720826_3723156_3723456_3725102_3725220_3731390_3731579_3735190_3735325_3744508_3744650_3753315_3753409_3760487_3760627_3762901_3763040_3768580_3768745_3771747_3771929_3773631_3773740_3775881_3776022_3778872_3779050_3779155_3779258_3782041_3782146_3797399
transcript_30368.known	chr11	-	3923	20	FSM	ENSG00000110713.17	ENST00000397004.8	3923	20	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_10	33.1723443870487	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCAGATGGCCTTATTTT	-3782114	True	NA	NA	False	TATAAA	-22	NA	3797541	3711552	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_3712729_3713817_3713996_3719411_3719551_3720711_3720826_3723156_3723456_3725102_3725220_3731390_3731579_3735190_3735325_3744508_3744650_3753315_3753409_3760538_3760627_3762901_3763040_3768580_3768745_3771747_3771929_3773631_3773740_3775881_3776022_3778872_3779050_3779155_3779258_3782041_3782146_3797399
transcript_30379.known	chr11	+	1837	7	FSM	ENSG00000148985.20	ENST00000396986.6	1837	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	79.5089093540256	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTTTTTGGGCCAACA	3797805	False	NA	0	True	NA	NA	NA	3797818	3826334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_3797983_3808293_3808316_3811249_3811425_3823882_3824136_3824269_3824377_3825019_3825129_3825327
transcript_30383.nnic	chr11	+	1799	7	NIC	ENSG00000148985.20	novel	1963	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	12	junction_1	83.3614952414416	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGCCTAGGCTTGCTAG	3805425	True	NA	18	True	AATAAA	-18	NA	3808559	3826352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_3808652_3822908_3822994_3823612_3823741_3823882_3824136_3824269_3824377_3825019_3825129_3825327
transcript_30384.known	chr11	+	863	6	FSM	ENSG00000148985.20	ENST00000464229.5	863	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	92.4705358479121	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCAAACATCACCTTTAC	3797457	True	NA	NA	False	NA	NA	NA	3797923	3825652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_3797983_3808293_3808316_3823882_3824136_3824269_3824365_3825019_3825129_3825327
transcript_30385.known	chr11	+	810	6	FSM	ENSG00000148985.20	ENST00000490830.5	810	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	95.514606212872	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGATACCATTCTGGCCTT	3797458	True	NA	NA	False	AAGAAA	-1	NA	3797924	3825509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_3797983_3808293_3808316_3823882_3824136_3824269_3824456_3825019_3825129_3825327
transcript_30390.nnic	chr11	+	1671	6	NIC	ENSG00000148985.20	novel	1963	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	12	junction_1	85.9176349767613	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGCCTAGGCTTGCTAG	3805425	True	NA	18	True	AATAAA	-18	NA	3808559	3826352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_3808652_3822908_3822994_3823882_3824136_3824269_3824377_3825019_3825129_3825327
transcript_30391.known	chr11	+	894	6	FSM	ENSG00000148985.20	ENST00000479072.5	894	6	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	85.7997668994503	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAAGGGTGTAGGCCAA	3805459	True	NA	NA	False	NA	NA	NA	3808593	3825578	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_3808652_3823612_3823741_3823882_3824136_3824269_3824365_3825019_3825129_3825327
transcript_30393.known	chr11	+	699	5	FSM	ENSG00000148985.20	ENST00000464441.5	699	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	91.6255968602661	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCACCTTTCACTGAGGT	3797505	True	NA	NA	False	NA	NA	NA	3797971	3825777	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_3797983_3808293_3808316_3824269_3824377_3825019_3825129_3825327
transcript_30395.known	chr11	+	1963	7	FSM	ENSG00000148985.20	ENST00000278243.9	1963	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	79.4138247130533	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGGGGCTCATCTTGTT	3805425	True	NA	37	True	AATAAA	-37	NA	3808559	3826371	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_3808652_3811249_3811425_3817352_3817536_3823882_3824136_3824269_3824377_3825019_3825129_3825327
transcript_30396.known	chr11	+	1530	5	FSM	ENSG00000148985.20	ENST00000496834.6	1530	5	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	53.1718910703766	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAATTTTTTTTTTGGGCC	3805459	True	NA	-4	True	NA	NA	NA	3808593	3826330	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_3808652_3823882_3824136_3824269_3824377_3825019_3825129_3825327
transcript_30397.known	chr11	-	1295	2	FSM	ENSG00000177105.10	ENST00000351018.5	1295	2	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCGGCTCCTCCCTGTGT	-3836449	True	NA	-8	True	AATAAA	-18	NA	3840959	3826977	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_3828207_3840893
transcript_3040.known	chr1	+	10667	10	FSM	ENSG00000197312.12	ENST00000480945.6	10667	10	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	8.82476873407324	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTTTGATCAATTTCT	15612318	True	NA	10	True	AATAAA	-16	NA	15617457	15669044	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_15617809_15626668_15626799_15630324_15630562_15633438_15633566_15638306_15638435_15643521_15643651_15649719_15649824_15651705_15651896_15656616_15656680_15659836
transcript_30401.known	chr11	+	4168	13	FSM	ENSG00000167323.12	ENST00000526596.2	4168	13	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_11	12.6059399579017	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGGCTTTGACTCTCAT	3855274	True	NA	19	True	AATAAA	-22	NA	3855663	4093208	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_3856410_3967551_3967683_4023872_4023988_4055525_4055638_4059280_4059397_4070025_4070204_4074501_4074680_4082183_4082352_4082881_4082983_4083262_4083499_4084672_4084766_4086476_4086544_4091281
transcript_30402.known	chr11	+	4038	12	FSM	ENSG00000167323.12	ENST00000300737.8	4038	12	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_4	5.22391196311223	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCTTTGACTCTCATT	3855312	False	NA	20	True	AATAAA	-23	NA	3855701	4093209	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_3856410_3967551_3967683_4023872_4023988_4055525_4055638_4059280_4059397_4070025_4070204_4074501_4074680_4082183_4082352_4082881_4082983_4083262_4083499_4086476_4086544_4091281
transcript_30403.known	chr11	-	494	2	FSM	ENSG00000228661.1	ENST00000415809.1	494	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCCCGGCTCTGTTAAG	-3855498	False	NA	NA	False	TATAAA	-28	NA	3855509	3854317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_3854659_3855356
transcript_30406.known	chr11	+	3142	19	FSM	ENSG00000167325.15	ENST00000300738.10	3142	19	0	0	0	0	multi-exon	FALSE	canonical	3	695	junction_7	62.2585459451944	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTCTGTTCTTTGAGAA	4083452	True	NA	15	True	TATAAA	-19	NA	4094798	4138932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_4095032_4101992_4102082_4106045_4106224_4107434_4107536_4109643_4109704_4111600_4111641_4111899_4112063_4118319_4118462_4119844_4119929_4121603_4121766_4122140_4122221_4123182_4123385_4126683_4126834_4127034_4127257_4129073_4129151_4132285_4132422_4133562_4133659_4135081_4135271_4138194
transcript_30425.known	chr11	+	462	2	FSM	ENSG00000254480.2	ENST00000525365.1	462	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATCAACTTGATCTTTG	4187110	True	NA	NA	False	ATTAAA	-20	NA	4187139	4202655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_4187205_4202258
transcript_30428.known	chr11	-	1935	7	FSM	ENSG00000132109.10	ENST00000254436.8	1935	7	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_3	11.8988794990677	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCGTCTATCCCATTCAG	-4392184	True	NA	-14	True	AATAAA	-23	NA	4393702	4384896	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_4385854_4386156_4386258_4386967_4386991_4388299_4388531_4389653_4389750_4390001_4390459_4393632
transcript_30429.known	chr11	-	3187	7	FSM	ENSG00000167333.13	ENST00000531101.5	3187	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	19.4222095092763	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAGGAATATTAAAAATTG	-4607388	True	NA	-32	True	NA	NA	NA	4608204	4598779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_4600827_4601026_4601128_4601663_4601687_4602151_4602407_4603240_4603341_4605078_4605562_4608026
transcript_30433.nnic	chr11	-	2255	3	NNC	ENSG00000182070.7	novel	6178	2	NA	NA	-11114	-4105	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	25	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTCAGAGTCATACAAGG	-5165517	True	NA	NA	False	AATAAA	-19	NA	5165871	5150928	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_5152691_5163485_5163665_5165557
transcript_30434.known	chr11	-	587	3	FSM	ENSG00000213934.9	ENST00000330597.5	587	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTCTTCAGCTCTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	5249857	5248268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_5248488_5249367_5249591_5249712
transcript_30439.known	chr11	+	3217	8	FSM	ENSG00000121236.21	ENST00000278302.9	3217	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	65.5893221772681	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTCATTTTACTTTTT	5592580	True	NA	15	True	AATAAA	-18	NA	5596108	5612952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_5596182_5603245_5603736_5604533_5604630_5605336_5605568_5608371_5608395_5610144_5610246_5610534_5610562_5610776
transcript_30445.known	chr11	+	3422	8	FSM	ENSG00000121236.21	ENST00000380097.8	3422	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	78.808991510215	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTCATTTTACTTTTT	5596231	True	NA	15	True	AATAAA	-18	NA	5596636	5612952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_5596915_5603245_5603736_5604533_5604630_5605336_5605568_5608371_5608395_5610144_5610246_5610534_5610562_5610776
transcript_30448.known	chr11	+	2293	8	FSM	ENSG00000258659.7	ENST00000429814.3	2293	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	3.18157963590287	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGAGCTGTAGTAATGTC	5624900	True	NA	15	True	AATAAA	-26	NA	5625000	5644398	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_5625061_5632254_5632755_5633803_5633900_5634630_5634862_5641166_5641190_5642405_5642507_5642816_5642844_5643143
transcript_30454.known	chr11	+	1398	7	FSM	ENSG00000121236.21	ENST00000506134.5	1398	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	89.5184648860533	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTACAGGCACCCACCAC	5596400	False	NA	NA	False	NA	NA	NA	5596805	5611587	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_5596915_5604533_5604630_5605336_5605568_5608371_5608395_5610144_5610246_5610534_5610562_5610776
transcript_30459.known	chr11	-	3364	8	FSM	ENSG00000132256.20	ENST00000380034.8	3364	8	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_7	19.5625631641414	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAAGGGGTAATCCATTA	-5683519	True	NA	NA	False	TTTAAA	-41	NA	5685074	5663194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_5665396_5665655_5665683_5665980_5666082_5667688_5667712_5678203_5678435_5679073_5679170_5679760_5680239_5684867
transcript_30460.known	chr11	-	2862	8	FSM	ENSG00000132256.20	ENST00000684655.1	2862	8	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_7	32.2262410504995	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTATAAAGCATCTATCTAA	-5683542	True	NA	26	True	AATAAA	-8	NA	5685097	5663571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_5665396_5665655_5665683_5665980_5666082_5667688_5667712_5678203_5678435_5679073_5679170_5679760_5680239_5685015
transcript_30462.known	chr11	-	2290	11	FSM	ENSG00000132256.20	ENST00000380027.5	2290	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	77.4765125699395	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTATCTAAGTGTCTTGA	NA	False	NA	35	True	AATAAA	-17	NA	5872358	5663562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_5664174_5665655_5665683_5665980_5666082_5667688_5667712_5678203_5678435_5679073_5679170_5679760_5680239_5685015_5685395_5855751_5855855_5861164_5861362_5872314
transcript_30463.known	chr11	-	3170	7	FSM	ENSG00000132256.20	ENST00000396847.7	3170	7	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_6	21.0211533672367	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCATCTAATACTTTGGA	-5683487	True	NA	-19	True	AATAAA	-9	NA	5685042	5663616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_5665683_5665980_5666082_5667688_5667712_5678203_5678435_5679073_5679170_5679760_5680239_5684867
transcript_30465.nic	chr11	-	2921	7	NIC	ENSG00000132256.20	novel	3364	8	NA	NA	-10	0	intron_retention	FALSE	canonical	3	13	junction_2	59.7708587486875	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTATAAAGCATCTATCTAA	-5683554	True	NA	26	True	AATAAA	-8	NA	5685109	5663571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_5665396_5665655_5665683_5667688_5667712_5678203_5678435_5679073_5679170_5679760_5680239_5684867
transcript_30474.known	chr11	+	2888	8	FSM	ENSG00000132274.16	ENST00000379965.8	2888	8	0	0	0	0	multi-exon	FALSE	canonical	1	34	junction_3	62.8915490250917	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGTCTCATTCTTCAGT	5688088	True	NA	11	True	AATAAA	-17	NA	5689789	5710863	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_5689900_5696166_5696656_5697247_5697344_5698314_5698546_5706593_5706617_5708172_5708274_5708576_5708604_5709052
transcript_30478.nnic	chr11	-	3387	12	NNC	ENSG00000051009.11	novel	3364	12	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	2	4	junction_2	44.15524827711	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTTTTCTTT	-6232362	True	NA	-10	True	TATAAA	-14	NA	6234636	6211344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_6211868_6214410_6214574_6214709_6214912_6217370_6218151_6218599_6218764_6218970_6219051_6222441_6222610_6222810_6222898_6223079_6223239_6223609_6224249_6224378_6224708_6234543
transcript_3048.known	chr1	+	1443	6	FSM	ENSG00000162460.7	ENST00000375782.2	1443	6	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	0.748331477354788	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGCTTAGAATCACGAA	15742435	True	NA	5	True	AATAAA	-18	NA	15742498	15747982	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_15742648_15742834_15742908_15743019_15743195_15744159_15744581_15746866_15747055_15747545
transcript_30480.known	chr11	-	3481	12	FSM	ENSG00000051009.11	ENST00000265978.8	3481	12	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	36.9126733595042	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTTTTCTTT	-6232437	False	NA	-10	True	TATAAA	-14	NA	6234711	6211344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6211868_6214410_6214574_6214732_6214912_6217370_6218151_6218557_6218764_6218970_6219051_6222441_6222610_6222810_6222898_6223079_6223239_6223609_6224249_6224378_6224708_6234543
transcript_30484.known	chr11	-	3364	12	FSM	ENSG00000051009.11	ENST00000449352.7	3364	12	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_4	31.3323955079158	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTTTTCTTT	-6232362	True	NA	-10	True	TATAAA	-14	NA	6234636	6211344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6211868_6214410_6214574_6214732_6214912_6217370_6218151_6218599_6218764_6218970_6219051_6222441_6222610_6222810_6222898_6223079_6223239_6223609_6224249_6224378_6224708_6234543
transcript_30490.nnic	chr11	-	3474	12	NNC	ENSG00000051009.11	novel	3364	12	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	44.1286623746427	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTTTTCTTT	-6232363	True	NA	-10	True	TATAAA	-14	NA	6234637	6211344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_6211977_6214410_6214574_6214732_6214912_6217370_6218151_6218599_6218764_6218970_6219051_6222441_6222610_6222810_6222898_6223079_6223239_6223609_6224249_6224378_6224708_6234543
transcript_30493.nnic	chr11	-	3359	11	NIC	ENSG00000051009.11	novel	3481	12	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_7	42.1421404297409	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTTTTCTTT	-6232402	True	NA	-10	True	TATAAA	-14	NA	6234676	6211344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_6211868_6214410_6214574_6214732_6214912_6217370_6218151_6218557_6218764_6218970_6219051_6222441_6222610_6223079_6223239_6223609_6224249_6224378_6224708_6234543
transcript_30497.nnic	chr11	-	3480	11	NIC	ENSG00000051009.11	novel	3364	12	NA	NA	-128	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_7	38.2073291398391	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTTTTCTTT	NA	False	NA	-10	True	TATAAA	-14	NA	6234839	6211344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_6211868_6214410_6214574_6214732_6214912_6217370_6218151_6218599_6218764_6218970_6219051_6222441_6222610_6223079_6223239_6223609_6224249_6224378_6224708_6234543
transcript_30505.known	chr11	-	3327	9	FSM	ENSG00000051009.11	ENST00000524416.1	3327	9	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	33.9132625236794	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAAAAAACCAACC	-6232389	True	NA	NA	False	NA	NA	NA	6234663	6216569	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6218151_6218599_6218764_6218970_6219051_6222441_6222610_6222810_6222898_6223079_6223239_6223609_6224249_6224378_6224708_6234543
transcript_30506.nic	chr11	-	3376	9	ISM	ENSG00000051009.11	ENST00000265978.8	3481	12	75	5191	0	34	5prime_fragment	FALSE	canonical	3	29	junction_1	41.3655578349912	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACCTCTGAGAAGTAGTA	-6232362	True	NA	NA	False	AAAACA	-27	NA	6234636	6216535	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_6218151_6218557_6218764_6218970_6219051_6222441_6222610_6222810_6222898_6223079_6223239_6223609_6224249_6224378_6224708_6234543
transcript_30514.known	chr11	+	2019	5	FSM	ENSG00000110148.10	ENST00000334619.7	2019	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_4	10.1365674663566	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTTCTGGATTCTTCT	6259038	True	NA	10	True	AATAAA	-21	NA	6259837	6272127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_6260080_6269668_6269921_6270087_6270338_6270645_6270804_6271010
transcript_30518.known	chr11	+	2138	4	FSM	ENSG00000110148.10	ENST00000525462.1	2138	4	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	7.48331477354788	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTTCTGGATTCTTCT	6259126	True	NA	10	True	AATAAA	-21	NA	6259925	6272127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_6260080_6269668_6269921_6270087_6270338_6270645
transcript_30521.known	chr11	-	957	3	FSM	ENSG00000170955.10	ENST00000530979.1	957	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGTGCTTGTGCCTTGT	-6317655	True	NA	-48	True	NA	NA	NA	6320532	6319143	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6319565_6319656_6319753_6320092
transcript_30522.known	chr11	-	1025	2	FSM	ENSG00000170955.10	ENST00000532354.1	1025	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGACTCCGTGAGAAGGGA	-6320043	False	NA	-4	True	AATAAA	-17	NA	6320062	6318945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6319565_6319656
transcript_30523.known	chr11	-	1028	2	FSM	ENSG00000170955.10	ENST00000303927.4	1028	2	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_1	0	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGACTCCGTGAGAAGGGA	-6317624	True	NA	-4	True	AATAAA	-17	NA	6320501	6318945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6319565_6320092
transcript_30524.known	chr11	+	2188	6	FSM	ENSG00000166311.10	ENST00000527275.5	2188	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	6.4	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGAGGGGGTTTGGCTGC	6390150	True	NA	NA	False	NA	NA	NA	6390474	6394778	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_6390917_6391386_6392157_6393215_6393388_6393616_6393694_6393895_6394042_6394197
transcript_30533.known	chr11	-	1920	14	FSM	ENSG00000166313.20	ENST00000608655.5	1920	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	147.731284920895	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCCTTCTTATGCCTG	-6404810	False	NA	-32	True	AATAAA	-16	NA	6404843	6395124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6395702_6395785_6395963_6396099_6396216_6400988_6401073_6401344_6401430_6401573_6401689_6401976_6401983_6402081_6402210_6402575_6402726_6403144_6403209_6403318_6403405_6403487_6403545_6403646_6403823_6404744
transcript_30535.known	chr11	-	2636	14	FSM	ENSG00000166313.20	ENST00000299402.10	2636	14	0	0	0	0	multi-exon	FALSE	canonical	1	118	junction_5	63.2973633970464	1088	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCCTTCTTATGCCTG	-6415650	True	NA	-32	True	AATAAA	-16	NA	6419070	6395124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6395702_6395785_6395963_6396099_6396216_6400988_6401073_6401344_6401430_6401573_6401689_6402081_6402210_6402575_6402726_6403144_6403209_6403318_6403405_6403487_6403545_6403646_6403823_6410626_6411362_6418984
transcript_30536.known	chr11	-	2619	14	FSM	ENSG00000166313.20	ENST00000311051.7	2619	14	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_13	105.014735511528	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCCTTCTTATGCCTG	-6419375	False	NA	-32	True	AATAAA	-16	NA	6419414	6395124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6395702_6395785_6395963_6396099_6396216_6400988_6401073_6401344_6401430_6401573_6401689_6402081_6402210_6402575_6402726_6403144_6403209_6403318_6403405_6403487_6403545_6403646_6403823_6410626_6411362_6419345
transcript_30539.known	chr11	-	1626	13	FSM	ENSG00000166313.20	ENST00000530885.5	1626	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_12	109.911422669954	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGGTCTAGAGGCTATTC	-6404865	False	NA	NA	False	ACTAAA	-15	NA	6404898	6395467	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6395702_6395785_6395963_6396099_6396216_6400988_6401073_6401344_6401430_6401573_6401689_6402081_6402210_6402575_6402726_6403144_6403209_6403318_6403405_6403487_6403545_6403646_6403823_6404744
transcript_30559.known	chr11	-	2684	14	NNC	ENSG00000166313.20	novel	2666	15	NA	NA	-17	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	105.563576289614	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCCTTCTTATGCCTGT	-6415691	True	NA	-31	True	AATAAA	-17	NA	6419111	6395123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_6395702_6395785_6395963_6396099_6396216_6400988_6401073_6401344_6401430_6401573_6401695_6402081_6402210_6402575_6402726_6403144_6403209_6403318_6403405_6403487_6403545_6403646_6403823_6410626_6411362_6418984
transcript_30560.known	chr11	-	2107	13	NNC	ENSG00000166313.20	novel	2128	15	NA	NA	0	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	135.335898990458	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCCTTCTTATGCCTGT	-6405384	False	NA	-31	True	AATAAA	-17	NA	6405417	6395123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_6395702_6395785_6395963_6396099_6396216_6400988_6401073_6401344_6401430_6401573_6401695_6402081_6402210_6402575_6402726_6403144_6403209_6403318_6403405_6403487_6403545_6403646_6403823_6405132
transcript_30561.nnic	chr11	-	2895	13	NNC	ENSG00000110171.21	novel	3042	13	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	27.8451821087	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTTTGCTGGGTTCTTG	-6469482	False	4450	-1	True	AATAAA	-14	NA	6473932	6448613	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_6449181_6449305_6449447_6450550_6450622_6450891_6451061_6451270_6451439_6456071_6456176_6456296_6457030_6457295_6457477_6457695_6457848_6458064_6458297_6465564_6465733_6473083_6473151_6473790
transcript_30562.known	chr11	-	3042	13	FSM	ENSG00000110171.21	ENST00000359518.7	3042	13	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_11	26.2043253427114	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATGTTTTTGCTGGGTTC	-6469534	False	NA	-4	True	AATAAA	-11	NA	6473984	6448616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6449181_6449305_6449447_6450550_6450622_6450891_6451061_6451270_6451439_6456071_6456176_6456296_6457030_6457295_6457477_6457695_6457848_6458064_6458297_6465564_6465733_6473083_6473249_6473790
transcript_30565.known	chr11	-	2838	12	FSM	ENSG00000110171.21	ENST00000345851.8	2838	12	0	0	0	0	multi-exon	TRUE	canonical	3	51	junction_11	11.1799702833769	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTGCTGGGTTCTTGT	-6469491	False	4450	0	True	AATAAA	-15	NA	6473941	6448612	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6449181_6449305_6449447_6450550_6450622_6450891_6451061_6451270_6451439_6456071_6456176_6456296_6457030_6457295_6457477_6457695_6457848_6458064_6458297_6465564_6465733_6473790
transcript_30586.known	chr11	-	2543	8	FSM	ENSG00000132254.13	ENST00000254584.6	2543	8	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_7	46.1917034692136	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGACCTGAAGGGTGAG	-6476862	True	NA	NA	False	NA	NA	NA	6481312	6475679	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6477269_6477717_6477893_6478040_6478199_6478737_6478960_6479139_6479259_6479971_6480069_6480322_6480424_6481230
transcript_30587.known	chr11	-	1763	8	FSM	ENSG00000132254.13	ENST00000396777.8	1763	8	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_7	47.0440523035894	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCAGCGAGGTCAATTTG	-6476881	True	NA	NA	False	AATAAA	-16	NA	6481331	6476518	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6477269_6477717_6477893_6478040_6478199_6478737_6478960_6479139_6479259_6479971_6480069_6480322_6480464_6481230
transcript_30594.known	chr11	-	1430	7	FSM	ENSG00000132254.13	ENST00000423813.6	1430	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	93.6401207935051	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGGGTGTGCTCCCTGA	-6476984	True	NA	NA	False	NA	NA	NA	6481434	6476813	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6477269_6477717_6477893_6478040_6478199_6478737_6478960_6479139_6479259_6479971_6480069_6481230
transcript_30604.nic	chr11	-	2195	7	NIC	ENSG00000132254.13	novel	2543	8	NA	NA	-14	-3	intron_retention	FALSE	canonical	3	149	junction_6	49.8698305591667	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGCCCAGCGAGGTCAAT	-6476907	True	NA	NA	False	AATAAA	-13	NA	6481357	6476521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_6477893_6478040_6478199_6478737_6478960_6479139_6479259_6479971_6480069_6480322_6480424_6481230
transcript_30605.nic	chr11	-	2234	7	NIC	ENSG00000132254.13	novel	1763	8	NA	NA	-13	-3	intron_retention	FALSE	canonical	3	146	junction_6	50.7961612722851	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGCCCAGCGAGGTCAAT	-6476906	True	NA	NA	False	AATAAA	-13	NA	6481356	6476521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_6477893_6478040_6478199_6478737_6478960_6479139_6479259_6479971_6480069_6480322_6480464_6481230
transcript_30624.known	chr11	+	608	4	FSM	ENSG00000132286.12	ENST00000533379.1	608	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	264.373893483369	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTGTGTGGTTGTCTT	6475831	True	NA	NA	False	AGTAAA	-12	NA	6481507	6483058	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_6481556_6481756_6481853_6482044_6482290_6482839
transcript_30626.known	chr11	+	2788	3	FSM	ENSG00000132286.12	ENST00000254616.11	2788	3	0	0	0	0	multi-exon	FALSE	canonical	3	574	junction_1	44.5	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGCTTCCCGTCCTTCC	6475824	True	NA	24	True	AATAAA	-17	NA	6481500	6484681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_6481556_6481756_6481853_6482044
transcript_30637.known	chr11	+	1759	13	FSM	ENSG00000166333.14	ENST00000299421.9	1759	13	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_1	265.313598512318	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTGGTGTGGGGACATG	6592031	True	NA	13	True	AATAAA	-15	NA	6603773	6610870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_6603823_6604179_6604361_6608045_6608212_6608393_6608490_6608693_6608791_6608883_6608968_6609070_6609157_6609298_6609409_6609511_6609640_6609723_6609846_6609935_6610036_6610147_6610279_6610461
transcript_30640.known	chr11	+	1692	13	FSM	ENSG00000166333.14	ENST00000420936.6	1692	13	0	0	0	0	multi-exon	FALSE	canonical	3	711	junction_1	179.22539735081	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCCCGCCTGTCACAAT	6592015	True	NA	-24	True	NA	NA	NA	6603757	6610833	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_6603823_6604225_6604361_6608045_6608212_6608393_6608490_6608693_6608791_6608883_6608968_6609070_6609157_6609298_6609409_6609511_6609640_6609723_6609846_6609935_6610036_6610147_6610279_6610461
transcript_30641.nnic	chr11	+	1874	13	NNC	ENSG00000166333.14	novel	1759	13	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	360.882127185903	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTGGTGTGGGGACATG	6591971	True	NA	13	True	AATAAA	-15	NA	6603713	6610870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_6603878_6604179_6604361_6608045_6608212_6608393_6608490_6608693_6608791_6608883_6608968_6609070_6609157_6609298_6609409_6609511_6609640_6609723_6609846_6609935_6610036_6610147_6610279_6610461
transcript_30645.known	chr11	-	3210	13	FSM	ENSG00000166340.18	ENST00000647209.1	3210	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	76.3489794736424	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGGAATAATGTTGATAAC	-6618317	True	NA	-36	True	NA	NA	NA	6619413	6613032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6614687_6614865_6614992_6615170_6615330_6615441_6615563_6616004_6616075_6616314_6616504_6616660_6616860_6616974_6617154_6617300_6617429_6617625_6617777_6618775_6618916_6619195_6619260_6619383
transcript_30646.known	chr11	-	3333	13	FSM	ENSG00000166340.18	ENST00000644683.1	3333	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	74.2119243937403	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCGTTGGTGCCTAGAGG	-6618333	True	NA	-121	True	NA	NA	NA	6619429	6612875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6614687_6614865_6614992_6615170_6615330_6615441_6615563_6616004_6616075_6616314_6616504_6616660_6616860_6616974_6617154_6617358_6617429_6617625_6617777_6618775_6618916_6619195_6619268_6619383
transcript_30653.known	chr11	+	1801	12	FSM	ENSG00000166333.14	ENST00000537806.5	1801	12	0	0	0	0	multi-exon	FALSE	canonical	3	711	junction_1	185.932450188389	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCCGCCTGTCACAATAA	6592001	True	NA	-22	True	NA	NA	NA	6603743	6610835	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_6603823_6604225_6604361_6608045_6608212_6608393_6608490_6608693_6608968_6609070_6609157_6609298_6609409_6609511_6609640_6609723_6609846_6609935_6610036_6610147_6610279_6610461
transcript_30655.known	chr11	+	1594	12	FSM	ENSG00000166333.14	ENST00000526711.5	1594	12	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	395.824362084795	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGTGGGGACATGGGGA	6591988	True	NA	17	True	AATAAA	-19	NA	6603730	6610874	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_6603823_6604225_6604361_6608393_6608490_6608693_6608791_6608883_6608968_6609070_6609157_6609298_6609409_6609511_6609640_6609723_6609846_6609935_6610036_6610147_6610279_6610461
transcript_30669.known	chr11	-	5312	5	FSM	ENSG00000166337.11	ENST00000299424.9	5312	5	0	0	0	0	multi-exon	FALSE	canonical	3	1249	junction_4	82.9559370991613	265	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGAGTCACCATCACTAC	-6597402	True	NA	-15	True	AATAAA	-17	NA	6612216	6606293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6611012_6611188_6611304_6611387_6611453_6611663_6611819_6611957
transcript_30670.known	chr11	-	2107	5	FSM	ENSG00000166340.18	ENST00000524788.2	2107	5	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	19.7405040462497	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAAGGGAATGCTATAAGC	-6618317	True	NA	NA	False	NA	NA	NA	6619413	6616598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6616860_6616974_6617429_6617625_6618916_6619195_6619268_6619383
transcript_30672.known	chr11	-	2290	4	FSM	ENSG00000166340.18	ENST00000645020.1	2290	4	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_1	18.8384948679264	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGTGCCCATCCCTCAA	-6618333	True	NA	NA	False	NA	NA	NA	6619429	6616546	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6617429_6617625_6618916_6619195_6619268_6619383
transcript_30676.known	chr11	-	1099	2	FSM	ENSG00000166340.18	ENST00000528657.2	1099	2	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACTAGTGTGCATGGCAG	-6618333	True	NA	NA	False	NA	NA	NA	6619429	6618214	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6619268_6619383
transcript_30677.known	chr11	+	2074	12	FSM	ENSG00000166333.14	ENST00000396751.6	2074	12	0	0	0	0	multi-exon	FALSE	canonical	3	1178	junction_5	80.3255771663512	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTGGTGTGGGGACATG	6592073	True	NA	13	True	AATAAA	-15	NA	6603815	6610870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_6604361_6608045_6608212_6608393_6608490_6608693_6608791_6608883_6608968_6609070_6609157_6609298_6609409_6609511_6609640_6609723_6609846_6609935_6610036_6610147_6610279_6610461
transcript_30678.known	chr11	-	2305	3	FSM	ENSG00000158042.9	ENST00000288937.7	2305	3	0	0	0	0	multi-exon	FALSE	canonical	3	841	junction_2	26.5	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAAGTACATGAATCC	-6673090	True	NA	NA	False	NA	NA	NA	6683340	6680384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6682403_6682746_6682816_6683122
transcript_30680.known	chr11	-	1002	2	FSM	ENSG00000158042.9	ENST00000529958.1	1002	2	0	0	0	0	multi-exon	FALSE	canonical	3	894	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCTTTATATGAATATAT	-6673046	True	NA	-49	True	AATAGA	-4	NA	6683296	6681950	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_6682403_6682746
transcript_30681.known	chr11	+	1503	8	FSM	ENSG00000149054.16	ENST00000610573.4	1503	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_7	29.357055960942	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGATTAGAGGCACCCAC	6924688	True	NA	NA	False	NA	NA	NA	6926422	6984238	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_6926686_6927661_6927808_6932093_6932673_6941570_6941654_6943082_6943216_6943545_6943642_6955689_6955783_6984128
transcript_30687.known	chr11	+	3655	7	FSM	ENSG00000149054.16	ENST00000278319.10	3655	7	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_6	9.14087280053473	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTCATCCTTTATAT	6924691	True	NA	9	True	ATTAAA	-16	NA	6926425	6958047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_6926686_6927661_6927808_6932093_6932673_6941570_6941654_6943082_6943216_6943545_6943642_6955689
transcript_30693.known	chr11	+	1602	6	FSM	ENSG00000149054.16	ENST00000527171.5	1602	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	32.5699247773156	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCCTATGAATGTTATCA	NA	False	NA	NA	False	AAAAAG	-14	NA	6926403	6956105	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_6926686_6927661_6927808_6932093_6932673_6941570_6941654_6943545_6943642_6955689
transcript_30698.known	chr11	-	4892	3	FSM	ENSG00000149050.10	ENST00000278314.5	4892	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGACTAGAGGAGTCTT	-7019835	True	NA	NA	False	AATAAA	-22	NA	7020346	6997084	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_7001556_7002708_7002856_7020072
transcript_30702.known	chr11	+	4002	7	FSM	ENSG00000170743.17	ENST00000318881.11	4002	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.0368111930481	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAACCTTGTCTTATTTAA	7251607	True	NA	8	True	AGTAAA	-18	NA	7251903	7469043	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_7252332_7303038_7303391_7313394_7313942_7416041_7416163_7417956_7418129_7420505_7420636_7466791
transcript_30708.known	chr11	+	3328	24	FSM	ENSG00000166387.14	ENST00000299492.9	3328	24	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_11	7.35129838203438	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGCAGCTCACCATATCT	7513575	True	NA	14	True	AATAAA	-20	NA	7513998	7653756	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_7514122_7549439_7549540_7565552_7565768_7593131_7593225_7597559_7597674_7610290_7610423_7620934_7621028_7625776_7625892_7628284_7628347_7629458_7629535_7630924_7631029_7632866_7632935_7634494_7634553_7635551_7635594_7639731_7639871_7641478_7641621_7642297_7642427_7648386_7648538_7648799_7648912_7649146_7649236_7649531_7649655_7650839_7650966_7651655_7651845_7653023
transcript_3072.nic	chr1	+	2011	9	NIC	ENSG00000162458.13	novel	3314	9	NA	NA	-84	0	combination_of_known_junctions	TRUE	canonical	3	126	junction_2	93.8576049129744	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAAAAAAAAAGTGCCTT	15758677	False	NA	-12	True	NA	NA	NA	15758699	15785329	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_15758849_15764495_15764548_15764963_15765234_15767375_15767564_15768527_15768631_15770408_15770579_15774617_15774797_15777169_15777288_15784547
transcript_30720.known	chr11	-	1338	10	FSM	ENSG00000166394.15	ENST00000524790.5	1338	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	121.930561092759	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATGAAGTGTGGCTCTG	-7670206	False	3266	-3	True	AATAAA	-20	NA	7673472	7665099	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_7665547_7665826_7665940_7666450_7666551_7667727_7667814_7668477_7668562_7669204_7669335_7669624_7669732_7672450_7672524_7672747_7672892_7673418
transcript_30724.known	chr11	-	1249	9	FSM	ENSG00000166394.15	ENST00000299498.11	1249	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_8	84.0680527905815	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCCCATGAAGTGTGGC	-7670234	False	3266	-7	True	AATAAA	-16	NA	7673500	7665103	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_7665547_7666450_7666551_7667727_7667814_7668477_7668562_7669204_7669335_7669624_7669732_7672450_7672524_7672747_7672892_7673418
transcript_30725.known	chr11	-	1658	9	FSM	ENSG00000166394.15	ENST00000533558.5	1658	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_8	83.0924748397832	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCCCATGAAGTGTGGC	-7670942	True	NA	-7	True	AATAAA	-16	NA	7674208	7665103	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_7665547_7666450_7666551_7667727_7667814_7668477_7668562_7669204_7669335_7669624_7669732_7672450_7672524_7672747_7672892_7673717
transcript_30727.nic	chr11	-	1306	9	NIC	ENSG00000166394.15	novel	1658	9	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	92	junction_8	60.4823062969659	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCCCATGAAGTGTGGC	-7670984	True	NA	-7	True	AATAAA	-16	NA	7674250	7665103	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_7665547_7666450_7666551_7667727_7667814_7668477_7668562_7669204_7669335_7669624_7669732_7672450_7672524_7672747_7672892_7674111
transcript_30729.known	chr11	+	6920	8	FSM	ENSG00000175390.15	ENST00000651655.1	6920	8	0	0	0	0	multi-exon	FALSE	canonical	3	1943	junction_2	87.7282445849635	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGAAACAATACCTTATAT	7944180	True	NA	NA	False	TATAAA	-20	NA	7987336	8001852	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_7987717_7991780_7991852_7992083_7992164_7992886_7993025_7994425_7994518_7994981_7995119_7995253_7995368_7995944
transcript_3073.nic	chr1	+	3271	9	NIC	ENSG00000162458.13	novel	3314	9	NA	NA	-84	0	combination_of_known_junctions	FALSE	canonical	3	126	junction_2	93.8576049129744	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATGTTGTGTGTAGGCT	15758677	False	NA	20	True	AATAAA	-21	NA	15758699	15786589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_15758849_15764495_15764548_15764963_15765234_15767375_15767564_15768527_15768631_15770408_15770579_15774617_15774797_15777169_15777288_15784547
transcript_30730.known	chr11	+	4308	8	FSM	ENSG00000175390.15	ENST00000678132.1	4308	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	742.242630444371	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTGGTGGCACGCACCTG	7944187	True	NA	NA	False	AATACA	-12	NA	7987343	7999127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_7987717_7991780_7991972_7992083_7992164_7992886_7993025_7994425_7994518_7994981_7995119_7995253_7995368_7995944
transcript_30748.known	chr11	-	1211	7	FSM	ENSG00000166405.15	ENST00000528463.5	1211	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	13.7598449603669	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAGGTGACCTCTCTCTC	-8167093	True	NA	NA	False	AAAACA	-29	NA	8169008	8110664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_8111138_8126658_8126808_8137377_8137472_8138271_8138348_8139966_8140194_8153374_8153424_8168865
transcript_3075.known	chr1	+	3314	9	FSM	ENSG00000162458.13	ENST00000375766.8	3314	9	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_4	48.7568905386716	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATGTTGTGTGTAGGCT	15753833	True	NA	20	True	AATAAA	-21	NA	15758794	15786589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_15758849_15764495_15764686_15764963_15765234_15767375_15767564_15768527_15768631_15770408_15770579_15774617_15774797_15777169_15777288_15784547
transcript_30750.known	chr11	-	2929	6	FSM	ENSG00000166405.15	ENST00000343202.8	2929	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	14.2407864951343	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTCTGTGTTATTTCC	NA	False	NA	NA	False	GATAAA	-1	NA	8169055	8108941	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_8111138_8126658_8126805_8137377_8137472_8138271_8138348_8139966_8140194_8168865
transcript_30755.nic	chr11	-	891	4	ISM	ENSG00000166405.15	ENST00000531450.1	1017	6	20	26113	7	-1233	5prime_fragment	FALSE	canonical	3	30	junction_2	16.2138486760204	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAAATTATGCTTTTTTT	-8167086	True	NA	NA	False	AAAAAG	-15	NA	8169001	8137019	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_8137472_8138271_8138348_8139966_8140194_8168865
transcript_30759.nic	chr11	-	1006	3	ISM	ENSG00000166405.15	ENST00000528463.5	1211	7	-257	28972	-210	-583	5prime_fragment	FALSE	canonical	3	36	junction_2	1	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACATCTTTACAGGCCGA	NA	False	NA	NA	False	NA	NA	NA	8169265	8139636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_8140194_8153374_8153424_8168865
transcript_30760.known	chr11	-	1300	2	FSM	ENSG00000166405.15	ENST00000419822.2	1300	2	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTTACTTTCTGCAGAA	-8167110	True	NA	NA	False	CATAAA	-42	NA	8169025	8139053	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_8140194_8168865
transcript_30773.known	chr11	-	2558	13	FSM	ENSG00000130413.16	ENST00000396672.5	2558	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	22.5511763674438	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTAATTTTTATGTTAAC	-8592595	False	1361	-7	True	AATAAA	-19	NA	8593956	8391870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_8392711_8413494_8413693_8435493_8435580_8436026_8436140_8440677_8440754_8452821_8452907_8454743_8454833_8457340_8457480_8461804_8461910_8464708_8464823_8473162_8473277_8474680_8475067_8593743
transcript_30783.known	chr11	-	786	7	FSM	ENSG00000166436.17	ENST00000644261.1	786	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.21335164821342	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGACATGGGCATGAGC	-8681801	True	NA	NA	False	NA	NA	NA	8682694	8672016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_8672099_8672247_8672386_8674805_8674884_8678133_8678170_8679619_8679815_8679900_8680064_8682600
transcript_3079.nic	chr1	+	1840	9	NIC	ENSG00000162458.13	novel	3314	9	NA	NA	-55	-145	combination_of_known_junctions	FALSE	canonical	3	126	junction_2	111.823451811326	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCCAGGCATGGTAGCAG	15753767	True	NA	NA	False	AATACA	-5	NA	15758728	15785184	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_15758849_15764492_15764548_15764963_15765234_15767375_15767564_15768527_15768631_15770408_15770579_15774617_15774797_15777169_15777288_15784547
transcript_30792.known	chr11	-	4341	20	FSM	ENSG00000166444.19	ENST00000313726.11	4341	20	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_19	52.6986414853783	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCATGTGTTCCTTGGCT	-8809925	True	NA	-6	True	AATAAA	-26	NA	8810674	8693351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_8694131_8695462_8695550_8696426_8696667_8697524_8697637_8698932_8698975_8699212_8699391_8702571_8702721_8707084_8707226_8707776_8707855_8710844_8710915_8711121_8711232_8712550_8712736_8713997_8714043_8714609_8714707_8715602_8715819_8717740_8717893_8726072_8726210_8729949_8731210_8750620_8750726_8810516
transcript_30795.known	chr11	-	2679	19	FSM	ENSG00000166444.19	ENST00000530438.5	2679	19	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_17	54.9085659736616	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCCTTCTCAGTAGCAGA	-8811006	False	NA	NA	False	AATGAA	-23	NA	8811016	8694095	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_8694131_8695462_8695550_8696426_8696667_8697524_8697637_8698932_8698975_8699212_8699391_8702571_8702721_8707084_8707226_8707776_8707855_8710844_8710915_8711121_8711232_8712550_8712736_8713997_8714043_8714609_8714707_8715602_8715819_8717740_8717893_8726072_8726210_8750620_8750726_8810516
transcript_30803.known	chr11	-	769	5	FSM	ENSG00000166444.19	ENST00000532162.5	769	5	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_4	10.4253297309965	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAGAATATGGCAAATAT	-8698101	True	NA	NA	False	NA	NA	NA	8699020	8693888	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_8694131_8695462_8695550_8696426_8696667_8697524_8697637_8698932
transcript_30808.nnic	chr11	+	1150	6	NNC	ENSG00000166441.13	novel	4535	5	NA	NA	-30	1682	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	2865.79185566573	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGTGTGACTTTTAGTC	8497265	True	NA	7	True	ATTAAA	-27	NA	8682757	8687530	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_8682817_8683201_8683266_8684005_8684082_8684717_8684893_8685677_8686271_8687347
transcript_3081.nic	chr1	+	3245	9	NIC	ENSG00000162458.13	novel	3314	9	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	3	126	junction_2	111.823451811326	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATGTTGTGTGTAGGCT	15753767	True	NA	20	True	AATAAA	-21	NA	15758728	15786589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_15758849_15764492_15764548_15764963_15765234_15767375_15767564_15768527_15768631_15770408_15770579_15774617_15774797_15777169_15777288_15784547
transcript_30810.nnic	chr11	+	3258	6	NNC	ENSG00000166441.13	novel	4535	5	NA	NA	-30	-234	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	2865.79185566573	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCACATCATCTGGCTCTA	8497265	True	NA	2	True	AATAAA	-17	NA	8682757	8689638	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_8682817_8683201_8683266_8684005_8684082_8684717_8684893_8685677_8686271_8687347
transcript_30811.nnic	chr11	+	1146	6	NNC	ENSG00000166441.13	novel	4535	5	NA	NA	-30	1682	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2865.79185566573	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGTGTGACTTTTAGTC	8497265	True	NA	7	True	ATTAAA	-27	NA	8682757	8687530	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_8682817_8683201_8683266_8684005_8684082_8684717_8684893_8685677_8686283_8687363
transcript_30813.known	chr11	+	651	5	FSM	ENSG00000166441.13	ENST00000534599.5	651	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	2907.68662341732	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTGTGGTGTGAGTGTA	8497299	True	NA	26	True	ATTAAA	-14	NA	8682791	8685845	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_8682817_8683201_8683266_8683862_8684082_8684717_8684893_8685677
transcript_30814.known	chr11	+	4535	5	FSM	ENSG00000166441.13	ENST00000314138.11	4535	5	0	0	0	0	multi-exon	FALSE	canonical	3	4085	junction_1	1400.79093729221	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTGACTAATCCCACTTA	8497299	True	NA	NA	False	NA	NA	NA	8682791	8689872	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_8682817_8683201_8683266_8684005_8684082_8684717_8684893_8685677
transcript_30817.known	chr11	+	406	5	FSM	ENSG00000166441.13	ENST00000532359.5	406	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	2909.52354346893	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGTGTGAGTGTAGGT	8497299	True	NA	29	True	ATTAAA	-17	NA	8682791	8685848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_8682817_8683201_8683266_8684005_8684082_8684822_8684893_8685677
transcript_30820.known	chr11	+	878	4	FSM	ENSG00000166441.13	ENST00000530022.5	878	4	0	0	0	0	multi-exon	FALSE	canonical	3	6695	junction_3	379.545634790981	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGTGTGAGTGTAGGT	8497317	True	NA	29	True	ATTAAA	-17	NA	8682809	8685848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_8683266_8684005_8684082_8684717_8684893_8685677
transcript_30821.known	chr11	+	297	3	FSM	ENSG00000166441.13	ENST00000525981.1	297	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	3764	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTGGTGTGAGTGTAGG	8682711	True	NA	28	True	ATTAAA	-16	NA	8683214	8685847	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_8683266_8684005_8684082_8685677
transcript_30822.known	chr11	+	558	5	FSM	ENSG00000166441.13	ENST00000524496.5	558	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2913.94329045711	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTGGTGTGAGTGTAGG	8497296	True	NA	28	True	ATTAAA	-16	NA	8682788	8685847	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_8682817_8683201_8683266_8683960_8684082_8684717_8684893_8685677
transcript_30823.known	chr11	+	805	2	FSM	ENSG00000166441.13	ENST00000530913.1	805	2	0	0	0	0	multi-exon	FALSE	canonical	3	6695	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGTGTGAGTGTAGGT	8683622	False	NA	29	True	ATTAAA	-17	NA	8684258	8685848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_8684893_8685677
transcript_30824.known	chr11	+	1273	6	FSM	ENSG00000166452.12	ENST00000309377.9	1273	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	68.6964336774479	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAATTCATTTTTATTAAG	8907739	True	NA	NA	False	AATAAA	-17	NA	8911188	8920079	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_8911224_8911443_8911672_8912452_8912534_8914825_8914931_8917286_8917368_8919336
transcript_30827.known	chr11	+	1232	5	FSM	ENSG00000166452.12	ENST00000309357.8	1232	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	41.5391381711272	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTTTTATTAAGAGGTG	8911134	False	NA	NA	False	AATAAA	-22	NA	8911153	8920084	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_8911224_8911443_8911672_8912452_8912534_8914825_8914931_8919336
transcript_30829.known	chr11	+	1247	5	FSM	ENSG00000166452.12	ENST00000299576.9	1247	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	72.7233628210357	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTTTTATTAAGAGGTG	8911119	False	NA	NA	False	AATAAA	-22	NA	8911138	8920084	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_8911224_8911443_8911672_8914825_8914931_8917286_8917368_8919336
transcript_30832.known	chr11	+	1022	5	FSM	ENSG00000166452.12	ENST00000534147.5	1022	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	57.0438427878066	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGACCTCGTGATCCACC	8911411	False	NA	NA	False	NA	NA	NA	8911442	8919862	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_8911672_8912452_8912534_8914825_8914931_8917286_8917368_8919336
transcript_30834.known	chr11	+	1084	4	FSM	ENSG00000166452.12	ENST00000396648.6	1084	4	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	47.6188571424762	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGGATTACAGGCGTGA	8907888	True	NA	NA	False	NA	NA	NA	8911337	8919900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_8911672_8914825_8914931_8917286_8917368_8919336
transcript_30838.known	chr11	+	513	3	FSM	ENSG00000166452.12	ENST00000529942.1	513	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	55.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGATTCTCTTAATAGCT	8911433	False	NA	6	True	AATAAA	-7	NA	8911464	8919537	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_8911672_8914825_8914931_8919336
transcript_30839.known	chr11	+	1421	3	FSM	ENSG00000166452.12	ENST00000529876.5	1421	3	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	50	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGTTGGAGTTCTACAGC	8907739	True	NA	NA	False	NA	NA	NA	8911188	8918119	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_8911672_8914825_8914931_8917286
transcript_3084.nic	chr1	+	1978	9	NIC	ENSG00000162458.13	novel	3314	9	NA	NA	-55	-145	combination_of_known_junctions	FALSE	canonical	3	156	junction_1	83.9985118915805	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCCAGGCATGGTAGCAG	15753767	True	NA	NA	False	AATACA	-5	NA	15758728	15785184	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_15758849_15764492_15764686_15764963_15765234_15767375_15767564_15768527_15768631_15770408_15770579_15774617_15774797_15777169_15777288_15784547
transcript_30840.known	chr11	-	1844	5	FSM	ENSG00000175348.11	ENST00000534025.6	1844	5	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_4	17.9495821678389	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGACTACTGTTTTAT	-8962780	True	NA	83	True	TATAAA	-17	NA	8964442	8947201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_8948476_8953202_8953338_8956189_8956299_8962091_8962184_8964208
transcript_30843.known	chr11	+	4181	4	FSM	ENSG00000254860.7	ENST00000657967.1	4181	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	2.94392028877595	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCAAGACTCCGTCTCAA	8964053	True	NA	NA	False	NA	NA	NA	8964509	8971123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_8965149_8965903_8966045_8966540_8966657_8967838
transcript_30844.known	chr11	-	1659	4	FSM	ENSG00000175348.11	ENST00000309134.9	1659	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	73.3136337176714	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGTGTATCTATCTATG	-8962779	True	NA	-9	True	AATAAA	-19	NA	8964441	8947293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_8948476_8953202_8953338_8956189_8956299_8964208
transcript_30846.nnic	chr11	-	3899	8	NNC	ENSG00000175352.11	novel	3761	7	NA	NA	-516	0	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_7	5.60611910581388	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTTGTCTGACAAAGTC	-9004353	True	NA	-3	True	AATAAA	-19	NA	9004565	8980575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_8983561_8983874_8983970_8984071_8984125_8985710_8985851_8987547_8987631_8988117_8988283_9003761_9003923_9004348
transcript_30847.known	chr11	-	3761	7	FSM	ENSG00000175352.11	ENST00000309166.8	3761	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	3.62476052848859	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTTGTCTGACAAAGTC	-9003610	True	NA	-3	True	AATAAA	-19	NA	9004001	8980575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_8983561_8983874_8983970_8984071_8984125_8985710_8985851_8987547_8987631_8988117_8988283_9003761
transcript_3085.nic	chr1	+	2123	9	NIC	ENSG00000162458.13	novel	3314	9	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	3	156	junction_1	83.9985118915805	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAAAAAAAAAGTGCCTT	15753767	True	NA	-12	True	NA	NA	NA	15758728	15785329	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_15758849_15764492_15764686_15764963_15765234_15767375_15767564_15768527_15768631_15770408_15770579_15774617_15774797_15777169_15777288_15784547
transcript_30853.known	chr11	-	1440	8	FSM	ENSG00000166471.11	ENST00000611268.4	1440	8	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	91.5561609737155	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTCACATTTGGGATTT	-9307613	True	NA	-7	True	AATAAA	-18	NA	9314567	9280656	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_9281042_9283370_9283594_9286454_9286594_9287701_9287807_9288441_9288536_9295258_9295388_9299583_9299702_9314320
transcript_30856.known	chr11	-	3798	7	FSM	ENSG00000166471.11	ENST00000528080.6	3798	7	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_4	22.4158921799294	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACATTTGGGATTTATT	-9307639	True	NA	-4	True	AATAAA	-21	NA	9314593	9280653	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_9283594_9286454_9286594_9287701_9287807_9288441_9288536_9295258_9295388_9299583_9299702_9314320
transcript_30859.known	chr11	-	803	6	FSM	ENSG00000166471.11	ENST00000527813.5	803	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	123.235709110631	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCAACTTACAACAGCAGG	-9307676	True	NA	NA	False	NA	NA	NA	9314630	9283546	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_9283594_9287701_9287807_9288441_9288536_9295258_9295388_9299583_9299702_9314320
transcript_3086.nic	chr1	+	3383	9	NIC	ENSG00000162458.13	novel	3314	9	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	3	156	junction_1	83.9985118915805	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATGTTGTGTGTAGGCT	15753767	True	NA	20	True	AATAAA	-21	NA	15758728	15786589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_15758849_15764492_15764686_15764963_15765234_15767375_15767564_15768527_15768631_15770408_15770579_15774617_15774797_15777169_15777288_15784547
transcript_30861.known	chr11	-	723	3	FSM	ENSG00000166471.11	ENST00000533723.1	723	3	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_2	10	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTATTTGCTGAACTAATT	-9307679	True	NA	NA	False	ATTAAA	-40	NA	9314633	9295095	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_9295388_9299583_9299702_9314320
transcript_30863.known	chr11	+	6162	25	FSM	ENSG00000205339.10	ENST00000379719.8	6162	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	69.627269063365	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATAAAACTGTCAGTTCT	9374682	True	NA	13	True	AATAAA	-22	NA	9384651	9448127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_9384848_9403289_9403372_9408485_9408640_9409927_9410087_9414254_9414412_9417058_9417149_9420410_9420506_9420613_9420699_9423005_9423141_9423776_9423877_9424913_9424991_9425145_9425263_9428539_9428630_9429030_9429197_9429673_9429835_9430874_9431004_9433569_9433637_9433720_9433847_9434933_9435032_9436270_9436367_9437753_9437975_9438079_9438286_9440454_9440662_9442080_9442198_9445096
transcript_30872.nic	chr11	+	1746	14	ISM	ENSG00000205339.10	ENST00000379719.8	6162	25	-44	18932	-44	3871	5prime_fragment	FALSE	canonical	0	0	junction_2	70.3968463521723	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAAGGATTTTTGTATGT	9374638	True	NA	NA	False	AAGAAA	-3	NA	9384607	9429195	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_9384848_9403289_9403372_9408485_9408640_9409927_9410087_9414254_9414412_9417058_9417149_9420410_9420506_9420613_9420699_9423005_9423141_9423776_9423877_9424913_9424991_9425145_9425263_9428539_9428630_9429030
transcript_30873.nic	chr11	+	1443	12	ISM	ENSG00000205339.10	ENST00000379719.8	6162	25	-44	22913	-44	-110	5prime_fragment	TRUE	canonical	0	0	junction_2	73.2444114021875	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGAGCCCTGCATATGAT	9374638	True	NA	-29	True	NA	NA	NA	9384607	9425214	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_9384848_9403289_9403372_9408485_9408640_9409927_9410087_9414254_9414412_9417058_9417149_9420410_9420506_9420613_9420699_9423005_9423141_9423776_9423877_9424913_9424991_9425145
transcript_30885.known	chr11	+	2900	16	FSM	ENSG00000166478.10	ENST00000396602.7	2900	16	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_4	22.1305219097969	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTATATTTATTTATTTA	9456772	True	NA	20	True	AATACA	-19	NA	9461011	9528524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_9461077_9471301_9471421_9472676_9472770_9473940_9474025_9474549_9474634_9478389_9478587_9479471_9479547_9494645_9494766_9496302_9496379_9497674_9497801_9501090_9501271_9508618_9508847_9512447_9512597_9516200_9516363_9525239_9525387_9527529
transcript_30890.known	chr11	+	2022	16	FSM	ENSG00000166478.10	ENST00000530463.5	2022	16	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_4	32.6187403530888	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTCAGAACAATGGAGCAA	9456736	True	NA	NA	False	NA	NA	NA	9460975	9527613	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_9461077_9471301_9471421_9472676_9472770_9473940_9474025_9474552_9474634_9478389_9478587_9479471_9479547_9494645_9494766_9496302_9496379_9497674_9497801_9501090_9501271_9508618_9508847_9512447_9512597_9516200_9516363_9525239_9525387_9527529
transcript_30899.known	chr11	+	1954	15	FSM	ENSG00000166478.10	ENST00000396597.7	1954	15	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	48.7306214754927	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTCATCTTCTGGCAGC	9456747	True	NA	NA	False	AATAAA	-10	NA	9460986	9527646	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_9461077_9471301_9471421_9473940_9474025_9474549_9474634_9478389_9478587_9479471_9479547_9494645_9494766_9496302_9496379_9497674_9497801_9501090_9501271_9508618_9508847_9512447_9512597_9516200_9516363_9525239_9525387_9527529
transcript_30904.nic	chr11	+	743	7	ISM	ENSG00000166478.10	ENST00000396602.7	2900	16	-50	49002	-14	0	5prime_fragment	FALSE	canonical	3	112	junction_4	25.6477202798915	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATGAGCAAGAGAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	9460961	9479522	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_9461077_9471301_9471421_9472676_9472770_9473940_9474025_9474549_9474634_9478389_9478587_9479471
transcript_30906.known	chr11	-	1147	1	FSM	ENSG00000268403.2	ENST00000596206.2	1147	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCGGATTACTGTTTTTTG	-9460686	False	NA	-2	True	AATAAA	-14	NA	9460702	9459555	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_9459600_9460700
transcript_30908.known	chr11	+	3588	11	FSM	ENSG00000166483.12	ENST00000450114.7	3588	11	0	0	0	0	multi-exon	TRUE	canonical	3	560	junction_6	49.7975903031462	205	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTGTACTGAGTCACAG	9568326	True	NA	NA	False	AATATA	-19	NA	9573669	9589985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_9574510_9575887_9576094_9576229_9576294_9576486_9576660_9577141_9577264_9581531_9581679_9585257_9585354_9585441_9585528_9586448_9586620_9586710_9586857_9588448
transcript_30913.known	chr11	+	468	1	FSM	ENSG00000243964.1	ENST00000475608.1	468	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAGTCCAGATGCCTAAT	NA	False	NA	NA	False	NA	NA	NA	9606141	9606609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_9606100_9606600
transcript_30914.known	chr11	+	4884	12	FSM	ENSG00000133789.15	ENST00000318950.11	4884	12	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_11	44.1337186736733	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGTGTATCTATGTGTA	9657792	True	NA	50	True	AATAAA	-16	NA	9664076	9752993	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_9664279_9694145_9694287_9713465_9713640_9724657_9724886_9728052_9728200_9729342_9729452_9732528_9732711_9738212_9738321_9740180_9740348_9747857_9748057_9749086_9749184_9749863
transcript_30923.known	chr11	+	3538	11	FSM	ENSG00000133789.15	ENST00000447399.6	3538	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	95.0391498278473	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTATAGTTGCCTTTATAA	9657792	True	NA	10	True	AATAAA	-19	NA	9664076	9751821	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_9664279_9694145_9694287_9724657_9724886_9728052_9728200_9729342_9729452_9732528_9732711_9738212_9738321_9740180_9740348_9747857_9748057_9749086_9749184_9749863
transcript_30926.known	chr11	+	3006	9	FSM	ENSG00000133789.15	ENST00000524817.5	3006	9	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_6	41.182520563948	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTCTACTTGGGAGGC	9657850	True	NA	NA	False	TTTAAA	-13	NA	9664134	9741953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_9664279_9694145_9694287_9713465_9713640_9724657_9724886_9728052_9728200_9729342_9729452_9732528_9732711_9738212_9738321_9740180
transcript_30937.known	chr11	+	3714	2	FSM	ENSG00000246273.8	ENST00000663578.1	3714	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCTGAACACAAAATAAAAG	9758003	True	NA	-29	True	NA	NA	NA	9758267	9811325	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_9758504_9807847
transcript_30938.known	chr11	+	867	5	FSM	ENSG00000148926.10	ENST00000525063.2	867	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	98.9987373656856	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACTGAGAAATGAATGCT	10301056	False	NA	NA	False	NA	NA	NA	10305087	10306908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_10305230_10305679_10305799_10305948_10306099_10306331_10306649_10306769
transcript_30940.known	chr11	+	1492	4	FSM	ENSG00000148926.10	ENST00000278175.10	1492	4	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_3	17.2819751957543	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATTCTCTCGGCTCGGCT	10301041	True	NA	34	True	AATAAA	-16	NA	10305072	10307397	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_10305230_10305679_10305799_10305948_10306099_10306331
transcript_30941.known	chr11	+	584	3	FSM	ENSG00000148926.10	ENST00000524948.5	584	3	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_2	16	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGTGTTGGGGCCAAAGCT	10301045	True	NA	NA	False	NA	NA	NA	10305076	10306260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_10305230_10305679_10305799_10305948
transcript_30942.known	chr11	+	1640	3	FSM	ENSG00000148926.10	ENST00000534464.1	1640	3	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_2	20	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCATTCTCTCGGCTCGG	10301041	True	NA	32	True	AATAAA	-14	NA	10305072	10307395	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_10305230_10305679_10306099_10306331
transcript_30943.known	chr11	+	1839	2	FSM	ENSG00000148926.10	ENST00000530439.1	1839	2	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCGAACAGCAAACCAATAAA	10301042	True	NA	-1	True	CATAAA	-12	NA	10305073	10307362	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_10305230_10305679
transcript_30944.known	chr11	+	1889	3	FSM	ENSG00000148926.10	ENST00000528655.5	1889	3	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_2	4	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGATATGCGAACAGCAAAC	10301052	False	NA	-8	True	CATAAA	-5	NA	10305083	10307355	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_10305799_10305948_10306099_10306331
transcript_30946.known	chr11	+	3806	15	FSM	ENSG00000133805.16	ENST00000396554.7	3806	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4.62303460722412	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTTTTAAAGATTAATCT	10450669	False	NA	NA	False	NA	NA	NA	10450680	10507018	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_10451044_10461514_10461741_10478525_10478731_10482062_10482226_10484819_10485040_10487234_10487365_10493348_10493544_10494898_10495031_10495569_10495734_10496811_10496939_10500085_10500250_10501469_10501591_10502720_10502895_10504548_10504660_10505707
transcript_30949.known	chr11	-	4049	6	FSM	ENSG00000110315.7	ENST00000265981.7	4049	6	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_4	8.44748483277715	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATTTTTAACTGCTAT	-10538458	True	NA	-12	True	ATTAAA	-16	NA	10541187	10511672	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_10515067_10519033_10519142_10525191_10525374_10530642_10530752_10534015_10534206_10541121
transcript_30958.nnic	chr11	-	4117	20	NNC	ENSG00000072952.20	novel	6129	21	NA	NA	-35359	814	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	4.82318959763525	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGAAGTGGATATTACCCT	-10728759	False	NA	NA	False	AAAAAG	-10	NA	10729347	10574945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_10576576_10580454_10580590_10581866_10581987_10591547_10591613_10593491_10593600_10594145_10594196_10600917_10601060_10603119_10603252_10604404_10604546_10606741_10606773_10609727_10609852_10623777_10623857_10625965_10626584_10627715_10627761_10627972_10628026_10628750_10628829_10629537_10629712_10631990_10632062_10633967_10634072_10729130
transcript_30961.known	chr11	+	4330	25	FSM	ENSG00000198730.9	ENST00000361367.7	4330	25	0	0	0	0	multi-exon	TRUE	canonical	3	202	junction_6	28.4696475800691	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGTAACTTCGTGTCTT	10746932	True	NA	17	True	AATAAA	-18	NA	10751245	10779746	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_10751458_10752671_10752771_10754957_10755198_10755677_10755796_10756748_10756839_10760172_10760322_10761946_10762055_10763430_10763539_10763642_10763880_10764111_10764202_10764307_10764437_10764547_10764732_10766401_10766491_10767805_10767992_10768073_10768162_10768342_10768492_10770209_10770327_10770486_10770633_10771544_10771617_10772519_10772656_10773126_10773274_10774011_10774170_10775206_10775304_10775520_10775634_10778678
transcript_30997.known	chr11	-	4001	22	FSM	ENSG00000110321.19	ENST00000526148.6	4001	22	0	0	0	0	multi-exon	TRUE	canonical	1	31	junction_21	1397.76107658315	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGTGTGGCTGTAAATG	-10807905	False	NA	-32	True	AATAAA	-20	NA	10807973	10797049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_10797882_10798991_10799114_10799212_10799425_10799551_10799757_10800089_10800349_10800431_10800648_10800730_10800836_10800961_10801088_10801660_10801775_10802048_10802210_10802293_10802436_10803029_10803129_10803210_10803295_10803479_10803591_10803898_10804051_10804136_10804204_10804286_10804419_10804912_10805016_10805906_10806048_10806819_10806886_10807254_10807382_10807548
transcript_30999.known	chr11	-	3794	22	FSM	ENSG00000110321.19	ENST00000339995.11	3794	22	0	0	0	0	multi-exon	FALSE	canonical	3	5403	junction_21	454.056356197306	4800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTGATGTGTGGCTGTA	-10736210	True	NA	-36	True	AATAAA	-16	NA	10808926	10797053	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_10797882_10798991_10799114_10799212_10799425_10799551_10799757_10800089_10800349_10800431_10800648_10800730_10800836_10800961_10801088_10801660_10801775_10802048_10802210_10802293_10802436_10803029_10803129_10803210_10803295_10803479_10803591_10803898_10804051_10804136_10804204_10804286_10804419_10804912_10805016_10805906_10806048_10806819_10806886_10807254_10807382_10808704
transcript_31.known	ERCC-00077	+	258	1	FSM	ERCC-00077A	DQ516742	258	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AATAAA	-33	NA	0	258	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00077_+_0_300
transcript_31040.known	chr11	-	3346	21	FSM	ENSG00000110321.19	ENST00000396525.7	3346	21	0	0	0	0	multi-exon	FALSE	canonical	3	981	junction_8	1237.18492857778	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAATTGGTCCCTCCTA	-10808640	False	NA	-74	True	NA	NA	NA	10808708	10797169	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_10797882_10798991_10799114_10799212_10799425_10799551_10799757_10800089_10800349_10800431_10800648_10800730_10800836_10800961_10801088_10802048_10802210_10802293_10802436_10803029_10803129_10803210_10803295_10803479_10803591_10803898_10804051_10804136_10804204_10804286_10804419_10804912_10805016_10805906_10806048_10806819_10806886_10807254_10807382_10808704
transcript_31185.known	chr11	+	1094	3	FSM	ENSG00000247271.8	ENST00000501079.6	1094	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	10.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTAGTATGGCTTTTTTT	10857636	True	NA	15	True	AATAAA	-20	NA	10858216	10879272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_10858352_10865260_10865328_10878380
transcript_31186.known	chr11	-	586	3	FSM	ENSG00000236287.8	ENST00000528289.5	586	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	57	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGATCAGAAGGTTGGAA	-10854834	True	NA	NA	False	NA	NA	NA	10858065	10854766	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_10855087_10856143_10856206_10857861
transcript_31187.known	chr11	-	1512	3	FSM	ENSG00000236287.8	ENST00000526020.5	1512	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	62.5	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGATGAAAGTTATTTGTC	-10858761	True	NA	NA	False	AGTAAA	-19	NA	10858796	10854618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_10855082_10856143_10856258_10857861
transcript_31189.known	chr11	-	2741	3	FSM	ENSG00000236287.8	ENST00000432999.6	2741	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	58	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTTATTATTGGTATTT	-10854842	True	NA	-1	True	TTTAAA	-5	NA	10858073	10852703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_10855119_10856143_10856258_10857861
transcript_31192.known	chr11	+	1040	2	FSM	ENSG00000247271.8	ENST00000664153.2	1042	2	0	2	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTAGTATGGCTTTTTTT	10857638	True	NA	15	True	AATAAA	-20	NA	10858218	10879272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_10858367_10878380
transcript_31193.known	chr11	+	1020	3	FSM	ENSG00000247271.8	ENST00000658394.1	1020	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGGCTTTTTTTTTGTTT	10857644	True	NA	21	True	AATAAA	-26	NA	10858224	10879278	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_10858280_10865260_10865328_10878380
transcript_31194.known	chr11	-	2503	11	FSM	ENSG00000110328.6	ENST00000227756.5	2503	11	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	5.83438085832593	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTTTGCAGTCATTTGGT	-11621400	True	NA	-13	True	AATAAA	-16	NA	11622005	11270876	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_11271291_11293028_11293194_11327085_11327182_11332693_11332832_11340818_11341005_11372514_11372630_11377181_11377380_11379080_11379265_11432620_11432788_11448743_11448937_11621358
transcript_31199.nnic	chr11	-	2008	7	NNC	ENSG00000110328.6	novel	2503	11	NA	NA	-59	-94122	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	12.3254479296562	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTTATTATGGACAATAT	-11621459	True	NA	NA	False	AAAAAG	-9	NA	11622064	11364998	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_11365444_11372514_11372630_11377181_11377380_11379080_11379265_11432620_11432788_11448743_11448937_11621358
transcript_31200.known	chr11	+	9994	28	FSM	ENSG00000170242.19	ENST00000527733.7	9994	28	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_2	20.1095763686955	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATTTCACTCAGGACTGA	11837745	True	NA	NA	False	NA	NA	NA	11841971	11961887	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_11842225_11880176_11880381_11884466_11884581_11891967_11892107_11897596_11897694_11902714_11902861_11903262_11903343_11905398_11905549_11920155_11920252_11920341_11920495_11922723_11922892_11929433_11929566_11930043_11930121_11930695_11930752_11933003_11933117_11933830_11933936_11936302_11936511_11938256_11938373_11940428_11940549_11942334_11943113_11947944_11948121_11948477_11948559_11949888_11950005_11950363_11950483_11952740_11952872_11954896_11954945_11955033_11955165_11956000
transcript_31203.known	chr11	+	7775	27	FSM	ENSG00000170242.19	ENST00000339865.9	7775	27	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_1	34.6457132093854	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATTCTGTGTAATTTTT	NA	False	NA	5	True	AATAAA	-14	NA	11841422	11959323	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_11842225_11884466_11884581_11891967_11892107_11897596_11897694_11902714_11902861_11903262_11903343_11905398_11905549_11920155_11920252_11920341_11920495_11922723_11922892_11929433_11929566_11930043_11930121_11930695_11930752_11933003_11933117_11933830_11933936_11936302_11936511_11938256_11938373_11940428_11940549_11942334_11943113_11947944_11948121_11948477_11948559_11949888_11950005_11950363_11950483_11952740_11952872_11954896_11954945_11955033_11955165_11956000
transcript_31208.nic	chr11	+	3154	20	ISM	ENSG00000170242.19	ENST00000527733.7	9994	28	-9	18935	-9	-197	5prime_fragment	FALSE	canonical	3	135	junction_2	17.7330153610438	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAAATGAAGGGAAAAAAGA	11837736	True	NA	NA	False	NA	NA	NA	11841962	11942952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_11842225_11880176_11880381_11884466_11884581_11891967_11892107_11897596_11897694_11902714_11902861_11903262_11903343_11905398_11905549_11920155_11920252_11920341_11920495_11922723_11922892_11929433_11929566_11930043_11930121_11930695_11930752_11933003_11933117_11933830_11933936_11936302_11936511_11938256_11938373_11940428_11940549_11942334
transcript_31211.nic	chr11	+	2005	16	ISM	ENSG00000170242.19	ENST00000527733.7	9994	28	3	28027	3	-9289	5prime_fragment	FALSE	canonical	3	135	junction_2	16.9149506518806	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAGTAATGATGGAAAATAA	11837748	True	NA	NA	False	GATAAA	-26	NA	11841974	11933860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_11842225_11880176_11880381_11884466_11884581_11891967_11892107_11897596_11897694_11902714_11902861_11903262_11903343_11905398_11905549_11920155_11920252_11920341_11920495_11922723_11922892_11929433_11929566_11930043_11930121_11930695_11930752_11933003_11933117_11933830
transcript_31212.nic	chr11	+	1918	15	ISM	ENSG00000170242.19	ENST00000527733.7	9994	28	0	28831	0	-10093	5prime_fragment	FALSE	canonical	3	135	junction_2	17.4509516727803	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGAGAGTTGGAAGAACA	11837745	True	NA	19	True	ATTAAA	-16	NA	11841971	11933056	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_11842225_11880176_11880381_11884466_11884581_11891967_11892107_11897596_11897694_11902714_11902861_11903262_11903343_11905398_11905549_11920155_11920252_11920341_11920495_11922723_11922892_11929433_11929566_11930043_11930121_11930695_11930752_11933003
transcript_31219.known	chr11	-	9549	8	FSM	ENSG00000050165.19	ENST00000396505.7	9549	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_7	40.3712364771489	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCCCCAGGGAAAATGCTA	-12008062	False	NA	NA	False	ATTAAA	-8	NA	12009082	11956206	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_11964687_11965808_11965966_11966953_11967099_11968394_11968488_11998695_11998780_12002299_12002438_12008369_12008609_12008869
transcript_31220.nic	chr11	-	2777	8	NIC	ENSG00000050165.19	novel	2636	8	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_7	50.9809888535893	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTAGTTCTTGGATTT	-12008358	True	NA	-1	True	TATAAA	-45	NA	12009378	11963105	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_11964687_11965808_11965966_11966953_11967099_11968394_11968488_11998695_11998780_12002299_12002438_12008369_12008609_12009038
transcript_31221.known	chr11	-	2636	8	FSM	ENSG00000050165.19	ENST00000326932.8	2636	8	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_7	31.2638540718922	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTAGTTCTTGGATTT	-12008350	True	NA	-1	True	TATAAA	-45	NA	12009370	11963105	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_11964687_11965808_11965966_11966953_11967099_11968394_11968488_11998695_11998780_12002299_12002438_12008369_12008609_12009171
transcript_31231.known	chr11	-	1087	3	FSM	ENSG00000050165.19	ENST00000534479.5	1087	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	52.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTGCCTCTTGGTCTAA	-12008310	True	NA	NA	False	NA	NA	NA	12009330	12001748	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_12002438_12008369_12008609_12009171
transcript_31232.known	chr11	-	2525	7	FSM	ENSG00000050165.19	ENST00000683431.1	2525	7	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_4	10.2048463432278	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAATAGAAACAACCTGT	-12007606	False	1020	69	True	AATAAA	-26	NA	12008626	11963035	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_11964687_11965808_11965966_11966953_11967099_11968394_11968488_11998695_11998780_12002299_12002438_12008369
transcript_31233.known	chr11	+	8627	13	FSM	ENSG00000197702.14	ENST00000334956.15	8627	13	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_4	6.94422221866655	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGAGCTTTCTCTCCCAT	12375659	True	NA	NA	False	ATTAAA	-45	NA	12377570	12535356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_12377784_12473744_12473835_12473912_12473984_12477846_12477950_12496457_12496599_12504313_12504430_12508583_12508643_12511513_12511534_12513298_12513361_12513996_12514066_12517609_12517712_12518444_12518518_12527848
transcript_31241.known	chr11	+	9417	13	FSM	ENSG00000187079.20	ENST00000527636.7	9417	13	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	16.4384373412506	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTTTATCTGCAGAAGT	12669748	True	NA	16	True	AATAAA	-21	NA	12674420	12944737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_12674835_12675408_12675562_12764178_12764435_12862249_12862315_12864837_12864901_12879707_12879843_12881004_12881052_12881895_12881958_12883000_12883126_12901939_12902114_12924911_12925053_12930173_12930327_12937108
transcript_31248.nic	chr11	+	2517	12	NIC	ENSG00000187079.20	novel	9417	13	NA	NA	-49	-1124	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	17.2746410423052	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGAAAACTTCACCCCTT	NA	False	NA	NA	False	ATTAAA	-22	NA	12674371	12937941	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_12674835_12764178_12764435_12862249_12862315_12864837_12864901_12879707_12879843_12881004_12881052_12881895_12881958_12883000_12883126_12901939_12902114_12924911_12925053_12930173_12930327_12937108
transcript_31249.nic	chr11	+	2622	12	NIC	ENSG00000187079.20	novel	9417	13	NA	NA	-49	-1019	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	17.2746410423052	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTCTTTTTGCAATAAGT	NA	False	NA	NA	False	AAAAAG	-7	NA	12674371	12938046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_12674835_12764178_12764435_12862249_12862315_12864837_12864901_12879707_12879843_12881004_12881052_12881895_12881958_12883000_12883126_12901939_12902114_12924911_12925053_12930173_12930327_12937108
transcript_31252.nic	chr11	+	2229	4	ISM	ENSG00000187079.20	ENST00000527636.7	9417	13	-617	81699	-617	-2501	5prime_fragment	FALSE	canonical	3	29	junction_2	10.6144555520604	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTAAAAACCTCATGGGTG	NA	False	NA	NA	False	AAAAAG	-19	NA	12673803	12863038	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_12674835_12675408_12675562_12764178_12764435_12862249
transcript_31259.known	chr11	+	2804	1	FSM	ENSG00000189431.8	ENST00000529419.3	2804	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGTCTAACTTCAGTATGT	13008957	True	NA	NA	False	ATTAAA	-33	NA	13009315	13012119	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_13009300_13012100
transcript_31260.known	chr11	+	2766	21	FSM	ENSG00000133794.20	ENST00000673888.1	2766	21	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_6	14.3473865215934	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATACTGTTCACATTTCA	13277065	True	NA	NA	False	AATAAA	-17	NA	13277877	13387262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_13277924_13309986_13310060_13326412_13326468_13349944_13350071_13354300_13354449_13355225_13355297_13356738_13356778_13357054_13357097_13358433_13358592_13360344_13360425_13365499_13365593_13366664_13366783_13369617_13369768_13372162_13372410_13374094_13374202_13375611_13375763_13376639_13376729_13378336_13378446_13381160_13381255_13385688_13385792_13386595
transcript_31261.known	chr11	+	2787	20	FSM	ENSG00000133794.20	ENST00000403290.6	2787	20	0	0	0	0	multi-exon	TRUE	canonical	2	14	junction_3	12.640128685484	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGTTCACATTTCAAATA	13276977	True	NA	NA	False	AATAAA	-21	NA	13277789	13387266	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_13277924_13309986_13310060_13326412_13326468_13349944_13350071_13354300_13354449_13356738_13356778_13357054_13357097_13358433_13358592_13360344_13360425_13365499_13365593_13366664_13366783_13369617_13369768_13372162_13372410_13374094_13374202_13375611_13375763_13376639_13376729_13378336_13378446_13381160_13381255_13385688_13385792_13386595
transcript_31263.known	chr11	+	2759	20	FSM	ENSG00000133794.20	ENST00000673626.1	2759	20	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	12.9913672594034	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATACTGTTCACATTTC	13277016	True	NA	NA	False	AATAAA	-16	NA	13277828	13387261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_13277924_13309986_13310060_13349944_13350071_13354300_13354449_13355225_13355297_13356738_13356778_13357054_13357097_13358433_13358592_13360344_13360425_13365499_13365593_13366664_13366783_13369617_13369768_13372162_13372410_13374094_13374202_13375611_13375763_13376639_13376729_13378336_13378446_13381160_13381255_13385688_13385792_13386595
transcript_31264.known	chr11	+	2745	20	FSM	ENSG00000133794.20	ENST00000673892.1	2745	20	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	13.6227364126456	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACTGTTCACATTTCAA	13277029	True	NA	NA	False	AATAAA	-18	NA	13277841	13387263	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_13277924_13309986_13310060_13349944_13350071_13354300_13354449_13355225_13355297_13356738_13356778_13357054_13357097_13358433_13358592_13360344_13360425_13365499_13365593_13366664_13366783_13369617_13369768_13372165_13372410_13374094_13374202_13375611_13375763_13376639_13376729_13378336_13378446_13381160_13381255_13385688_13385792_13386595
transcript_31265.known	chr11	+	2728	19	FSM	ENSG00000133794.20	ENST00000403510.8	2728	19	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_4	10.4628974104797	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATACTGTTCACATTTCA	13276977	True	NA	NA	False	AATAAA	-17	NA	13277789	13387262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_13277924_13309986_13310060_13349944_13350071_13354300_13354449_13356738_13356778_13357054_13357097_13358433_13358592_13360344_13360425_13365499_13365593_13366664_13366783_13369617_13369768_13372162_13372410_13374094_13374202_13375611_13375763_13376639_13376729_13378336_13378446_13381160_13381255_13385688_13385792_13386595
transcript_31266.nic	chr11	+	2778	19	NIC	ENSG00000133794.20	novel	2776	20	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	2	15	junction_11	11.3675952699866	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGTTCACATTTCAAATA	13276928	True	NA	NA	False	AATAAA	-21	NA	13277740	13387266	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_13277924_13309986_13310060_13349944_13350071_13354300_13354449_13356738_13356778_13357054_13357097_13358433_13358592_13360344_13360425_13365499_13365593_13366664_13366783_13369617_13369768_13372165_13372410_13374094_13374202_13375611_13375763_13376639_13376729_13378336_13378446_13381160_13381255_13385688_13385792_13386595
transcript_31269.known	chr11	+	2641	18	FSM	ENSG00000133794.20	ENST00000529388.6	2641	18	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	13.7090377584634	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACTGTTCACATTTCAA	13276939	True	NA	NA	False	AATAAA	-18	NA	13277751	13387263	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_13277924_13309986_13310060_13354300_13354449_13356738_13356778_13357054_13357097_13358433_13358592_13360344_13360425_13365499_13365593_13366664_13366783_13369617_13369768_13372162_13372410_13374094_13374202_13375611_13375763_13376639_13376729_13378336_13378446_13381160_13381255_13385688_13385792_13386595
transcript_31276.known	chr11	-	2439	9	FSM	ENSG00000148925.11	ENST00000278174.10	2439	9	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_8	44.2632395447961	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATAACCACATTGACCAG	-13460671	True	NA	-11	True	AATAAA	-30	NA	13463222	13388007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_13389142_13403167_13403279_13405658_13405857_13413529_13413651_13417157_13417261_13419459_13419746_13421641_13421839_13445023_13445182_13463091
transcript_31277.known	chr11	-	1662	8	FSM	ENSG00000148925.11	ENST00000528120.5	1662	8	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_7	29.7822026021706	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTTTTTTAAAGACCAAAG	-13460746	True	NA	NA	False	NA	NA	NA	13463297	13388701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_13389142_13403167_13403279_13405658_13405857_13413529_13413651_13417157_13417261_13419459_13419746_13421641_13421839_13463091
transcript_31282.known	chr11	+	5266	12	FSM	ENSG00000197601.13	ENST00000354817.8	5266	12	0	0	0	0	multi-exon	TRUE	canonical	3	277	junction_3	22.7396330025555	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGATGTGCTCCTTTGCA	13660803	True	NA	19	True	ATTAAA	-22	NA	13668667	13732346	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_13668807_13694758_13694955_13700316_13700493_13707899_13708080_13710692_13710871_13711763_13711809_13711927_13712047_13712965_13713034_13714508_13714681_13721729_13721860_13727555_13727684_13728611
transcript_31291.nic	chr11	+	1587	3	ISM	ENSG00000197601.13	ENST00000532701.1	1109	8	-49	11522	-6	995	5prime_fragment	FALSE	canonical	3	287	junction_2	22	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGTTCTGATTACAAAAG	13660797	True	NA	NA	False	ATTAAA	-12	NA	13668661	13701562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_13668807_13694758_13694955_13700316
transcript_31293.known	chr11	+	5052	16	FSM	ENSG00000262655.4	ENST00000576479.4	5052	16	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	4.69325757514614	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGCATATTGAACATATT	13962385	True	NA	NA	False	AATAAA	-24	NA	13962722	14268133	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_13963143_13982846_13982954_14041520_14041655_14075344_14075419_14079898_14080022_14135419_14135569_14243331_14243397_14254527_14254730_14255646_14255788_14256616_14256693_14257715_14257899_14259279_14259451_14259533_14259702_14260587_14260753_14262711_14262976_14265523
transcript_31306.known	chr11	-	732	6	FSM	ENSG00000133818.14	ENST00000531807.5	732	6	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_5	321.489906528961	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACCAGAACCAACACGGAA	-14339989	True	NA	NA	False	NA	NA	NA	14342094	14279396	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_14279425_14281601_14281721_14294470_14294580_14294759_14294863_14295767_14295856_14341809
transcript_31307.known	chr11	-	970	6	FSM	ENSG00000133818.14	ENST00000526063.5	970	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	387.629513840213	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTATATACACAGACATGC	-14358465	False	10664	NA	False	AATATA	-2	NA	14358485	14279102	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_14279425_14281601_14281721_14294470_14294580_14294759_14294863_14295767_14295856_14358256
transcript_31308.known	chr11	-	2343	6	FSM	ENSG00000133818.14	ENST00000256196.9	2343	6	0	0	0	0	multi-exon	FALSE	canonical	3	702	junction_5	129.593827013481	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGATGTTTGATTACTCAT	-14348519	True	NA	-14	True	ATTAAA	-19	NA	14359183	14277921	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_14279425_14281601_14281721_14294470_14294580_14294759_14294863_14295767_14295856_14358762
transcript_31315.known	chr11	-	1884	5	FSM	ENSG00000133818.14	ENST00000414023.6	1884	5	0	0	0	0	multi-exon	FALSE	canonical	3	832	junction_1	81.5793325542689	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTTCAGGTGCTAGAAT	NA	False	NA	-56	True	NA	NA	NA	14295859	14277963	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_14279425_14281601_14281721_14294470_14294580_14294759_14294863_14295767
transcript_31320.known	chr11	-	1527	10	FSM	ENSG00000129084.18	ENST00000530457.5	1527	10	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_9	448.646634300466	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGACAACTGTGAAATAAAAT	-14505076	True	NA	-38	True	NA	NA	NA	14520363	14504912	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_14505249_14507655_14507767_14510871_14510952_14513569_14513700_14513816_14513888_14514402_14514492_14517641_14517746_14517879_14517982_14518996_14519042_14519904
transcript_31321.nic	chr11	-	1269	10	NIC	ENSG00000129084.18	novel	1195	10	NA	NA	3	0	intron_retention	FALSE	canonical	3	41	junction_9	456.311540750639	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGGTTTTTGTTTTTTT	-14505069	True	NA	-1	True	AATAAA	-20	NA	14520356	14504875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_14505249_14507655_14507767_14510871_14510952_14513569_14513700_14513816_14513888_14514402_14514492_14517641_14517746_14517879_14517982_14518996_14519042_14520192
transcript_31322.known	chr11	-	1195	10	FSM	ENSG00000129084.18	ENST00000396394.7	1195	10	0	0	0	0	multi-exon	FALSE	canonical	3	1224	junction_9	123.648645986606	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGGTTTTTGTTTTTTT	-14505099	True	NA	-1	True	AATAAA	-20	NA	14520386	14504875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_14505249_14507655_14507767_14510871_14510952_14513569_14513700_14513816_14513888_14514402_14514492_14517641_14517746_14517879_14517982_14518996_14519042_14520296
transcript_31341.known	chr11	-	3481	22	FSM	ENSG00000129083.13	ENST00000249923.7	3481	22	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_21	128.201478336324	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCAATGGATTTCTTTTAG	-14492149	True	NA	-8	True	AATAAA	-23	NA	14499852	14457505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_14457884_14458531_14458688_14460207_14460298_14461185_14461332_14464910_14465031_14466281_14466427_14468680_14468861_14469335_14469564_14474494_14474616_14475784_14475946_14476918_14477016_14479568_14479715_14480758_14480906_14480989_14481098_14483031_14483152_14486366_14486505_14488491_14488585_14490564_14490680_14493641_14493812_14494209_14494440_14498837_14498986_14499608
transcript_31344.known	chr11	-	3336	22	FSM	ENSG00000129083.13	ENST00000439561.7	3336	22	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_21	76.4133347814784	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATATGGCAATGGATTTC	-14492108	True	NA	-14	True	AATAAA	-17	NA	14499811	14457511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_14457884_14458531_14458688_14460207_14460298_14461185_14461332_14464910_14465031_14466281_14466427_14468680_14468861_14469335_14469564_14474494_14474616_14475784_14475946_14476918_14477016_14479568_14479715_14480758_14480906_14480989_14481098_14483031_14483152_14486366_14486505_14488491_14488585_14490564_14490680_14493641_14493812_14494209_14494440_14498837_14498986_14499706
transcript_31345.nic	chr11	-	3355	22	NIC	ENSG00000129083.13	novel	3336	22	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	124	junction_21	113.640819372549	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATATGGCAATGGATTTC	-14492162	True	NA	-14	True	AATAAA	-17	NA	14499865	14457511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_14457884_14458531_14458688_14460207_14460298_14461185_14461332_14464910_14465031_14466281_14466427_14468680_14468861_14469335_14469564_14474494_14474616_14475784_14475946_14476918_14477016_14479568_14479715_14480758_14480906_14480989_14481098_14483031_14483152_14486366_14486505_14488491_14488585_14490564_14490680_14493641_14493812_14494209_14494440_14498837_14498986_14499741
transcript_31350.nic	chr11	-	2605	18	ISM	ENSG00000129083.13	ENST00000439561.7	3336	22	-56	7422	-5	-4918	5prime_fragment	FALSE	canonical	3	390	junction_17	65.6622900314932	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATAATTTTTGGTAATA	-14492164	True	NA	NA	False	ATTAAA	-30	NA	14499867	14464933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_14465031_14466281_14466427_14468680_14468861_14469335_14469564_14474494_14474616_14475784_14475946_14476918_14477016_14479568_14479715_14480758_14480906_14480989_14481098_14483031_14483152_14486366_14486505_14488491_14488585_14490564_14490680_14493641_14493812_14494209_14494440_14498837_14498986_14499706
transcript_31356.nic	chr11	-	2182	15	ISM	ENSG00000129083.13	ENST00000439561.7	3336	22	-56	11825	-5	4673	5prime_fragment	FALSE	canonical	3	390	junction_14	50.8936967349292	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAGGTATATATGATGAG	-14492164	True	NA	-1	True	NA	NA	NA	14499867	14469336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_14469564_14474494_14474616_14475784_14475946_14476918_14477016_14479568_14479715_14480758_14480906_14480989_14481098_14483031_14483152_14486366_14486505_14488491_14488585_14490564_14490680_14493641_14493812_14494209_14494440_14498837_14498986_14499706
transcript_31357.nic	chr11	-	2145	15	NIC	ENSG00000129083.13	novel	3481	22	NA	NA	-3	4673	combination_of_known_junctions	FALSE	canonical	3	124	junction_14	107.458416257126	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAGGTATATATGATGAG	-14492162	True	NA	-1	True	NA	NA	NA	14499865	14469336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_14469564_14474494_14474616_14475784_14475946_14476918_14477016_14479568_14479715_14480758_14480906_14480989_14481098_14483031_14483152_14486366_14486505_14488491_14488585_14490564_14490680_14493641_14493812_14494209_14494440_14498837_14498986_14499741
transcript_31366.known	chr11	+	5995	16	FSM	ENSG00000152270.9	ENST00000282096.9	5995	16	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_7	7.77574576630578	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATGATTTGAAAGCTGT	14642599	True	NA	NA	False	CATAAA	-18	NA	14643803	14872044	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_14645054_14771936_14771988_14786436_14786686_14789105_14789243_14803943_14804051_14818182_14818394_14819135_14819210_14830697_14830847_14831639_14831778_14832721_14832834_14834981_14835096_14843826_14844027_14859042_14859247_14861204_14861367_14867505_14867759_14869460
transcript_31370.known	chr11	-	2214	5	FSM	ENSG00000186104.11	ENST00000334636.10	2214	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	28.9568644711405	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGGCTATTGAATCTTT	-14892008	True	NA	NA	False	AATATA	-18	NA	14892231	14877439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_14878298_14879113_14879444_14880135_14880769_14885775_14885918_14891980
transcript_31372.known	chr11	+	1044	5	FSM	ENSG00000175868.14	ENST00000324229.11	1044	5	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	6.04152298679729	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGGGCCAGATATTATT	15073209	True	NA	10	True	AATAAA	-20	NA	15073592	15078637	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_15073664_15074709_15074805_15075060_15075199_15077285_15077471_15078082
transcript_3138.known	chr1	-	2720	16	FSM	ENSG00000116809.12	ENST00000375743.9	2720	16	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_13	12.9690229221617	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTATAGGTCCCTGT	-15974740	True	NA	0	True	AATAAA	-17	NA	15976101	15941868	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_15942253_15942330_15942421_15942528_15942739_15943063_15943195_15943398_15943520_15943598_15943716_15943807_15943896_15944299_15944601_15944696_15944840_15944936_15945203_15945714_15945841_15946153_15946295_15946934_15947124_15948290_15948498_15973038_15973126_15975982
transcript_31393.known	chr11	+	3920	5	FSM	ENSG00000110696.10	ENST00000228136.9	3920	5	0	0	0	0	multi-exon	FALSE	canonical	3	2316	junction_2	137.175981862715	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGCACTGCCCATTACC	16699495	True	NA	7	True	AGTAAA	-17	NA	16738646	16758340	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_16738842_16744600_16744685_16748096_16748158_16752784_16752895_16754870
transcript_31399.known	chr11	+	575	4	FSM	ENSG00000110696.10	ENST00000525684.1	575	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	1219.44768918829	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAAAATGATGTTTGTTA	16699506	True	NA	NA	False	AAAAAG	-14	NA	16738657	16755067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_16738842_16744600_16744685_16752784_16752895_16754870
transcript_31401.known	chr11	+	405	4	FSM	ENSG00000110696.10	ENST00000524439.5	405	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1204.35773570628	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATGATGATGACGATGA	16699492	True	NA	NA	False	NA	NA	NA	16738643	16754906	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_16738842_16748096_16748158_16752784_16752895_16754870
transcript_31404.known	chr11	+	762	3	FSM	ENSG00000110696.10	ENST00000525256.1	762	3	0	0	0	0	multi-exon	FALSE	canonical	3	2316	junction_2	117.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTAGCCTGGTGTGGTG	16699507	True	NA	NA	False	ACTAAA	-16	NA	16738658	16748591	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_16738842_16744600_16744685_16748096
transcript_31408.known	chr11	-	5530	27	FSM	ENSG00000166689.16	ENST00000531066.6	5530	27	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	10.5055634739563	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTTTCCTGTTTCTTGCT	-17013090	True	NA	-13	True	ATTAAA	-13	NA	17014414	16777296	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_16779021_16782753_16782897_16783699_16783834_16786228_16786388_16789095_16789297_16789774_16789879_16790797_16790916_16791010_16791200_16794487_16794715_16794909_16795019_16800973_16801076_16801667_16801818_16802971_16803053_16803226_16803296_16813112_16813167_16816177_16816265_16816799_16817323_16826119_16826591_16841546_16841723_16851190_16851292_16852282_16852356_16854888_16854994_16855802_16855915_16871098_16871183_17013988_17014047_17014124_17014202_17014315
transcript_31410.known	chr11	-	4980	23	FSM	ENSG00000166689.16	ENST00000355661.7	4980	23	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	9.94862837840324	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCAGTTGCCTAATCCT	-17013088	True	NA	0	True	ATTAAA	-20	NA	17014412	16787483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_16789297_16789774_16789879_16790797_16790916_16791010_16791200_16794487_16794715_16794909_16795019_16800973_16801076_16801667_16801818_16802971_16803053_16803226_16803296_16813112_16813167_16816177_16816265_16816799_16817323_16826119_16826591_16841546_16841723_16851190_16851292_16852282_16852356_16854888_16854994_16855802_16855915_16871098_16871183_17013988_17014047_17014124_17014202_17014315
transcript_31413.known	chr11	-	321	1	FSM	ENSG00000244398.1	ENST00000459748.1	321	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1715	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCATCTTTTATTATGAA	-16968304	False	NA	-67	True	NA	NA	NA	16975013	16974692	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_16974700_16975000
transcript_31414.known	chr11	+	1290	2	FSM	ENSG00000184669.10	ENST00000530490.3	1332	2	0	42	0	-25	multi-exon	FALSE	canonical	3	25	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCCTGCGGCGCCTGCA	17013762	True	NA	NA	False	ATTAAA	-1	NA	17013997	17052951	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_17014368_17052031
transcript_31417.known	chr11	-	491	6	FSM	ENSG00000110700.7	ENST00000228140.6	491	6	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	6218.06489512614	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTTTCATATTTATTTT	-16938685	True	NA	31	True	AATAAA	-19	NA	17077666	17074388	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_17074467_17075096_17075164_17075453_17075624_17077167_17077247_17077428_17077478_17077618
transcript_31418.known	chr11	-	561	6	FSM	ENSG00000110700.7	ENST00000526895.5	561	6	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_5	6576.52207173366	3617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTTTCATATTTATTTT	-16938725	True	NA	31	True	AATAAA	-19	NA	17077706	17074388	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_17074467_17075096_17075198_17075453_17075624_17077167_17077247_17077428_17077474_17077618
transcript_31428.known	chr11	-	568	3	FSM	ENSG00000110700.7	ENST00000534329.1	568	3	0	0	0	0	multi-exon	FALSE	canonical	3	13955	junction_2	1625.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGCTGCGTGTGACTTCG	-16938734	True	NA	NA	False	NA	NA	NA	17077715	17076824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_17077247_17077428_17077478_17077618
transcript_31430.known	chr11	-	583	2	FSM	ENSG00000110700.7	ENST00000528074.1	583	2	0	0	0	0	multi-exon	FALSE	canonical	3	13955	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAGGAAGCAGAGGCACAC	-16938697	True	NA	NA	False	AATAAA	-29	NA	17077678	17076954	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_17077478_17077618
transcript_31431.known	chr11	-	664	5	FSM	ENSG00000110700.7	ENST00000525828.1	664	5	0	0	0	0	multi-exon	FALSE	canonical	3	12545	junction_1	2033.15596733256	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCATGTTTCATATTTA	-16938687	True	NA	27	True	AATAAA	-15	NA	17077668	17074392	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_17074467_17075096_17075198_17075453_17075624_17077167_17077247_17077428
transcript_31437.known	chr11	-	584	3	FSM	ENSG00000011405.14	ENST00000532035.1	584	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTATTTTAGACCTACTAT	-17193609	True	NA	NA	False	NA	NA	NA	17207950	17169351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_17169807_17194388_17194415_17207847
transcript_3144.known	chr1	-	2770	16	FSM	ENSG00000116809.12	ENST00000375733.6	2770	16	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	18.4	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCCTATAGGTCCCT	-15974771	False	NA	-2	True	AATAAA	-15	NA	15976132	15941870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_15942253_15942330_15942442_15942528_15942739_15943063_15943195_15943398_15943520_15943598_15943716_15943807_15943896_15944299_15944601_15944696_15944840_15944936_15945203_15945714_15945841_15946153_15946295_15946934_15947124_15948290_15948498_15973038_15973126_15975982
transcript_31445.known	chr11	+	2300	14	FSM	ENSG00000070081.18	ENST00000529010.6	2300	14	0	0	0	0	multi-exon	TRUE	canonical	3	151	junction_7	20.0263140502158	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGTGGGGAAGGCAAGAAA	17275076	True	NA	NA	False	NA	NA	NA	17276738	17332211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_17276829_17282788_17282944_17295323_17295468_17296103_17296212_17301743_17301871_17309571_17309676_17310824_17311011_17311192_17311284_17311871_17311931_17312027_17312121_17315385_17315476_17330126_17330298_17330901_17330984_17331411
transcript_31451.nic	chr11	+	875	7	ISM	ENSG00000070081.18	ENST00000323688.10	1905	13	-46	20463	-36	0	5prime_fragment	FALSE	canonical	3	171	junction_2	14.3139403690559	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATGAAGAAAAGAGAAAAGAA	17275032	True	NA	NA	False	TTTAAA	-9	NA	17276694	17310927	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_17276829_17282788_17282944_17295323_17295468_17296103_17296212_17301743_17301871_17309571_17309676_17310824
transcript_31454.known	chr11	+	873	1	FSM	ENSG00000197149.5	ENST00000494359.1	873	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTTTTTATACAAGAAAAAT	NA	False	NA	NA	False	NA	NA	NA	17228278	17229151	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_17228300_17229200
transcript_31455.known	chr11	-	2146	2	FSM	ENSG00000187486.7	ENST00000528731.1	2146	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAACTCTGGGCTTTTCT	-17388792	True	NA	-6	True	AATAAA	-16	NA	17389331	17385858	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_17387847_17389173
transcript_31457.known	chr11	-	3412	1	FSM	ENSG00000187486.7	ENST00000339994.5	3412	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGACGGTGCTTTTATTT	-17388645	False	NA	-3	True	NA	NA	NA	17388659	17385247	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_17385200_17388700
transcript_31459.known	chr11	-	4903	39	FSM	ENSG00000006071.16	ENST00000643260.1	4903	39	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.78268837415157	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTGATTATTTCCTACT	-17476739	True	NA	-20	True	AATAAA	-2	NA	17476845	17392902	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_17393129_17393696_17393760_17394265_17394400_17395171_17395276_17395609_17395719_17395851_17395931_17396915_17397047_17397192_17397314_17397683_17397798_17398338_17398442_17402660_17402754_17404511_17404670_17405493_17405564_17406621_17406789_17406887_17407130_17407353_17407454_17408391_17408518_17410515_17410654_17412665_17412747_17413393_17413479_17414511_17414611_17415303_17415340_17416929_17416966_17427048_17427155_17427866_17427943_17428288_17428406_17428564_17428671_17430813_17430960_17432203_17432245_17442719_17442883_17443177_17443313_17448515_17448672_17453118_17453284_17460487_17460677_17461585_17461826_17463437_17463605_17470100_17470223_17474885_17475028_17476628
transcript_31462.known	chr11	-	1813	8	FSM	ENSG00000006071.16	ENST00000682863.1	1813	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1.98976975388345	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGTACATGGAATGCCCACA	-17476739	True	NA	NA	False	AAAAAG	-18	NA	17476845	17448100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_17448672_17453118_17453284_17460487_17460677_17461585_17461826_17463437_17463605_17470100_17470223_17474885_17475028_17476628
transcript_31463.known	chr11	-	4774	38	FSM	ENSG00000006071.16	ENST00000684593.1	4774	38	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	1.72083863564666	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTATTTCCTACTAGAGGC	-17476746	True	NA	-14	True	AATAAA	-8	NA	17476852	17392896	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_17393129_17393696_17393760_17394265_17394400_17395171_17395276_17395609_17395719_17395851_17395931_17396915_17397047_17397192_17397314_17397683_17397798_17398338_17398442_17402660_17402754_17404511_17404670_17405493_17405564_17406621_17406789_17406887_17407130_17407353_17407454_17408391_17408518_17410515_17410654_17412665_17412747_17413393_17413479_17414511_17414611_17415303_17415340_17416929_17416963_17427048_17427155_17427866_17427943_17428288_17428406_17428564_17428671_17430813_17430960_17432203_17432245_17442719_17442883_17443177_17443313_17448515_17448672_17453118_17453284_17460487_17460677_17461582_17461826_17463437_17463605_17470100_17470223_17476628
transcript_31464.known	chr11	-	4874	39	FSM	ENSG00000006071.16	ENST00000646902.1	4874	39	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.85652252889024	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTATTTCCTACTAGAGG	-17476738	True	NA	-15	True	AATAAA	-7	NA	17476844	17392897	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_17393129_17393696_17393760_17394265_17394400_17395171_17395276_17395609_17395719_17395851_17395931_17396915_17397017_17397192_17397314_17397683_17397798_17398338_17398442_17402660_17402754_17404511_17404670_17405493_17405564_17406621_17406789_17406887_17407130_17407353_17407454_17408391_17408518_17410515_17410654_17412665_17412747_17413393_17413479_17414511_17414611_17415303_17415340_17416929_17416963_17427048_17427155_17427866_17427943_17428288_17428406_17428564_17428671_17430813_17430960_17432203_17432245_17442719_17442883_17443177_17443313_17448515_17448672_17453118_17453284_17460487_17460677_17461585_17461826_17463437_17463605_17470100_17470223_17474885_17475028_17476628
transcript_31466.known	chr11	-	2232	21	FSM	ENSG00000006611.17	ENST00000318024.9	2232	21	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	2.87880183409696	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTATAGGAGTGAGTGTGG	-17544245	True	NA	-4	True	AATAAA	-17	NA	17544416	17493899	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_17494377_17496757_17496814_17498161_17498272_17501050_17501151_17501481_17501536_17501938_17501981_17517400_17517475_17520869_17520995_17521345_17521412_17522783_17522927_17523210_17523268_17523418_17523479_17524450_17524536_17526346_17526442_17526752_17526811_17527015_17527041_17527222_17527332_17531153_17531293_17531398_17531543_17533254_17533323_17544271
transcript_31467.known	chr11	-	2149	20	FSM	ENSG00000006611.17	ENST00000526313.5	2149	20	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	2.77902711209349	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGTGAGTGTGGATTTG	-17544231	True	NA	1	True	AATAAA	-22	NA	17544402	17493894	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_17494377_17496757_17496814_17498161_17498272_17501050_17501151_17501481_17501536_17501938_17501981_17520869_17520995_17521345_17521412_17522783_17522927_17523210_17523268_17523418_17523479_17524450_17524536_17526346_17526442_17526752_17526811_17527015_17527041_17527222_17527332_17531153_17531293_17531398_17531543_17533254_17533323_17544271
transcript_31483.nic	chr11	-	1448	11	NIC	ENSG00000129158.11	novel	1451	11	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_10	41.0945251828026	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCCAGAGAATTGTTT	-18011029	True	NA	-10	True	AATAAA	-20	NA	18012944	17788047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_17788414_17878207_17878245_17959469_17959637_17988596_17988756_17992930_17992994_17995795_17995910_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18012850
transcript_31484.known	chr11	-	1451	11	FSM	ENSG00000129158.11	ENST00000265965.10	1451	11	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_10	34.0360103419893	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCCAGAGAATTGTTT	-18011132	True	NA	-10	True	AATAAA	-20	NA	18013047	17788047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_17788414_17878207_17878245_17959469_17959637_17988596_17988756_17992930_17992994_17995795_17995910_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18012950
transcript_31489.known	chr11	-	1264	10	FSM	ENSG00000129158.11	ENST00000528200.5	1264	10	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	40.6988336654553	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTCCCAGAGAATTGTT	-18011113	True	NA	-11	True	AATAAA	-19	NA	18013028	17788048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_17788414_17878207_17878245_17988596_17988756_17992930_17992994_17995795_17995910_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18012950
transcript_31492.known	chr11	-	1526	12	FSM	ENSG00000166788.10	ENST00000531581.5	1526	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	166.209217952048	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTGAAATTGACTTATTG	-18100393	True	NA	-6	True	AATAAA	-19	NA	18106087	18080344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_18080492_18081410_18081504_18083534_18083729_18086861_18087055_18087142_18087226_18089329_18089511_18090174_18090291_18090433_18090494_18092244_18092325_18096770_18096855_18103232_18103347_18105906
transcript_31494.nic	chr11	-	1335	11	NIC	ENSG00000166788.10	novel	1573	12	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	171.178298858237	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAGTTGAAATTGACTTA	-18100403	True	NA	-9	True	AATAAA	-16	NA	18106097	18080347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_18080492_18081410_18081504_18086865_18087055_18087142_18087226_18089329_18089511_18090174_18090291_18090433_18090494_18092244_18092325_18096770_18096855_18103232_18103347_18105906
transcript_31502.known	chr11	-	804	7	FSM	ENSG00000166788.10	ENST00000533851.5	804	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	199.954508715246	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAGCTGCCAAACAAGTA	-18100377	True	NA	NA	False	NA	NA	NA	18106071	18089351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_18089511_18090174_18090317_18090433_18090494_18092244_18092325_18096770_18096855_18103232_18103347_18105906
transcript_31504.known	chr11	-	949	8	FSM	ENSG00000166788.10	ENST00000531751.5	949	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	194.324365903181	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTGAAATTGACTTATTG	-18092306	False	18	-6	True	AATAAA	-19	NA	18092324	18080344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_18080492_18081410_18081504_18086865_18087055_18087142_18087226_18089329_18089511_18090174_18090291_18090433_18090494_18092244
transcript_31505.known	chr11	-	4840	23	FSM	ENSG00000110756.18	ENST00000349215.8	4840	23	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_22	21.0403488799909	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTCAACTCTTTTTTGCA	-18320488	True	NA	2	True	AGTAAA	-18	NA	18322140	18278675	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_18279943_18281949_18282221_18283794_18283902_18285345_18285460_18286590_18286711_18287534_18287691_18287892_18288014_18291441_18292020_18292898_18292977_18295019_18295170_18295998_18296123_18296797_18296985_18297558_18297718_18298791_18298971_18300827_18300917_18305421_18305494_18306134_18306348_18308945_18309080_18310740_18310934_18311386_18311452_18311913_18312025_18317750_18317908_18321945
transcript_31513.known	chr11	-	4725	22	FSM	ENSG00000110756.18	ENST00000396253.7	4725	22	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_21	18.1299166449	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTTTTGCATTTATAAC	-18320522	True	NA	10	True	AGTAAA	-26	NA	18322174	18278667	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_18279943_18281949_18282221_18283794_18283902_18285345_18285460_18286590_18286711_18287534_18287691_18287892_18288014_18291441_18292020_18292898_18292977_18295019_18295170_18295998_18296123_18296797_18296985_18297558_18297718_18298791_18298971_18300827_18300917_18305421_18305494_18306134_18306348_18308945_18309080_18310740_18310934_18311386_18311452_18311913_18312025_18321945
transcript_31514.known	chr11	-	4147	22	FSM	ENSG00000110756.18	ENST00000438420.6	4147	22	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_21	21.1004508232244	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAAAATATTTTTCCCT	-18320522	True	NA	-22	True	AATAAA	-25	NA	18322174	18279058	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_18279943_18281949_18282221_18283794_18283902_18285345_18285460_18286590_18286711_18287534_18287691_18287892_18288014_18291441_18292020_18292898_18292977_18295019_18295170_18295998_18296123_18296797_18296985_18297558_18297718_18298791_18298971_18300827_18300917_18305421_18305494_18306134_18306348_18308945_18309080_18310740_18310934_18311386_18311452_18311913_18312025_18322132
transcript_3152.known	chr1	-	2511	15	FSM	ENSG00000116809.12	ENST00000537142.5	2511	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	25.3481875534504	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCCTATAGGTCCCT	-15974718	True	NA	-2	True	AATAAA	-15	NA	15976079	15941870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_15942253_15942330_15942421_15942528_15942739_15943063_15943195_15943398_15943520_15943598_15943716_15943807_15943896_15944299_15944601_15944696_15944840_15944936_15945203_15945714_15945841_15946153_15946317_15946934_15947124_15973038_15973126_15975982
transcript_31532.nic	chr11	-	2164	15	ISM	ENSG00000110756.18	ENST00000396253.7	4725	22	34	13137	0	-3914	5prime_fragment	FALSE	canonical	3	20	junction_14	20.1701942155716	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGACTCTTTAGGCAATGAA	-18320488	True	NA	21	True	AAAAAG	-35	NA	18322140	18291804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_18292020_18292898_18292977_18295019_18295170_18295998_18296123_18296797_18296985_18297558_18297718_18298791_18298971_18300827_18300917_18305421_18305494_18306134_18306348_18308945_18309080_18310740_18310934_18311386_18311452_18311913_18312025_18321945
transcript_31542.known	chr11	+	2707	16	FSM	ENSG00000110768.12	ENST00000453096.6	2707	16	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	46.0533024512539	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGAGGTTTTTTGGTTGTC	18322014	True	NA	NA	False	ATTAAA	-32	NA	18322294	18366261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_18322741_18325946_18326154_18333059_18333229_18335753_18335947_18338108_18338275_18339563_18339658_18341260_18341411_18341527_18341608_18347587_18347716_18347831_18347920_18351880_18351970_18352328_18352447_18357951_18358043_18358524_18358641_18360614_18360708_18365782
transcript_31546.known	chr11	+	3012	15	FSM	ENSG00000110768.12	ENST00000265963.9	3012	15	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_9	18.61437342376	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATCTCTGGTTTCTCATT	18319860	True	NA	33	True	AGTAAA	-30	NA	18322566	18367045	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_18322741_18333059_18333229_18335753_18335947_18338108_18338275_18339563_18339658_18341260_18341411_18341527_18341608_18347587_18347716_18347831_18347920_18351880_18351970_18352328_18352447_18357951_18358043_18358524_18358641_18360614_18360708_18365782
transcript_31562.nic	chr11	+	2468	9	ISM	ENSG00000110768.12	ENST00000418116.6	1822	14	-304	11939	-42	0	5prime_fragment	FALSE	canonical	3	112	junction_5	19.1143761342085	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTAATTTCTTTCATTTA	NA	False	NA	4	True	AATAAA	-15	NA	18322252	18348831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_18322741_18333059_18333229_18335753_18335947_18338108_18338275_18339563_18339658_18341260_18341411_18341527_18341608_18347587_18347716_18347831
transcript_31563.known	chr11	+	568	2	FSM	ENSG00000110768.12	ENST00000526461.1	568	2	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACACACTTTAAGAGTTG	18319861	True	NA	NA	False	NA	NA	NA	18322567	18333454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_18322741_18333059
transcript_31564.known	chr11	+	2241	8	FSM	ENSG00000134333.14	ENST00000422447.8	2241	8	0	0	0	0	multi-exon	FALSE	canonical	3	7252	junction_1	852.383453042355	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGGCCTGAAAACCATAC	18286635	True	NA	NA	False	AATACA	-14	NA	18394562	18408425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_18394637_18396818_18396969_18399430_18399549_18400836_18401011_18402839_18403014_18403693_18403812_18405448_18405573_18407116
transcript_31565.known	chr11	+	1922	8	FSM	ENSG00000134333.14	ENST00000379412.9	1922	8	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	3154.34847246056	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTTTGGTTAATTCATTA	18396208	False	NA	20	True	AATAAA	-14	NA	18396277	18407847	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_18396611_18396818_18396969_18399430_18399549_18400836_18401011_18402839_18403014_18403693_18403812_18405448_18405573_18407116
transcript_31567.known	chr11	-	1534	10	FSM	ENSG00000074319.13	ENST00000251968.4	1534	10	0	0	0	0	multi-exon	FALSE	canonical	3	633	junction_6	31.5211079582171	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTCCTTTATTGGA	-18515566	True	NA	-15	True	AATAAA	-14	NA	18526942	18480310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_18480636_18481629_18481870_18483869_18484073_18502485_18502578_18506856_18506924_18509541_18509666_18514677_18514842_18516098_18516165_18519518_18519604_18526774
transcript_31570.known	chr11	-	2101	10	FSM	ENSG00000074319.13	ENST00000536719.5	2101	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	214.849013880521	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATACATCCAAGCTGCTC	-18515575	True	NA	NA	False	AAAAAG	-14	NA	18526951	18468335	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_18469219_18481629_18481870_18483869_18484073_18502485_18502578_18506856_18506924_18509541_18509666_18514677_18514842_18516098_18516165_18519518_18519604_18526774
transcript_31576.known	chr11	-	4207	12	FSM	ENSG00000151116.17	ENST00000396197.8	4207	12	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	12.6810850227956	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGAGATGCTTCATTTAT	-18587701	True	NA	-1	True	AATAAA	-16	NA	18588734	18529608	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_18532488_18534329_18534454_18536405_18536470_18544622_18544797_18546879_18547051_18558227_18558331_18564891_18565011_18566346_18566483_18570213_18570378_18575346_18575413_18578723_18578809_18588612
transcript_31577.known	chr11	-	1354	11	FSM	ENSG00000151116.17	ENST00000396196.6	1354	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_8	16.3033738839542	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAAAGTCATTTAATTTT	-18587684	True	NA	NA	False	NA	NA	NA	18588717	18532280	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_18532488_18534329_18534454_18536405_18536470_18544622_18544797_18546879_18547051_18558227_18558331_18564891_18565011_18566346_18566483_18575346_18575413_18578723_18578809_18588612
transcript_31579.known	chr11	-	1848	11	FSM	ENSG00000151116.17	ENST00000379387.8	1848	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	14.277604841149	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTACTAATGTTTCTTGTG	-18587673	True	NA	NA	False	NA	NA	NA	18588706	18531873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_18532488_18534329_18534454_18536405_18536470_18544622_18544797_18546879_18547051_18558227_18558331_18564891_18565011_18566346_18566483_18570213_18570378_18578723_18578809_18588612
transcript_31581.known	chr11	-	5601	6	FSM	ENSG00000179119.15	ENST00000336349.6	5601	6	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_5	9.17387595294377	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTGCTGGTTTGCATT	-18632507	True	NA	-7	True	ATTAAA	-14	NA	18634342	18606402	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_18609955_18611476_18611555_18612313_18612489_18614562_18616099_18616874_18616990_18634197
transcript_31587.known	chr11	-	2167	4	FSM	ENSG00000179119.15	ENST00000536336.5	2167	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	11.0252236056942	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGCACTAAATATTTTAT	-18632554	True	NA	NA	False	AATAAA	-9	NA	18634389	18612164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_18612489_18614562_18616099_18616874_18616990_18634197
transcript_31592.nic	chr11	-	323	2	ISM	ENSG00000179119.15	ENST00000536336.5	2167	4	-16	4710	-16	-1102	5prime_fragment	FALSE	canonical	3	70	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTATCTATAGCCTTAT	-18632570	True	NA	NA	False	NA	NA	NA	18634405	18616874	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_18616990_18634197
transcript_31600.known	chr11	-	3871	15	FSM	ENSG00000110786.18	ENST00000396170.5	3871	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_11	13.4899811651735	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCCTGGGTCTGTGTGA	NA	False	NA	-3	True	AATAAA	-22	NA	18792721	18727929	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_18729028_18729452_18729567_18729657_18729819_18732591_18732703_18733234_18733373_18733555_18733636_18737879_18737965_18740602_18740793_18742261_18742504_18742991_18743076_18743321_18743334_18744005_18744200_18765806_18765884_18771938_18772027_18791524
transcript_31601.nic	chr11	-	3049	15	NIC	ENSG00000110786.18	novel	3871	15	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_11	12.0570497626738	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAACCTCCTGGGTCTGTGT	-18791406	True	NA	-5	True	AATAAA	-20	NA	18791856	18727931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_18729028_18729452_18729567_18729657_18729819_18732591_18732703_18733234_18733373_18733555_18733636_18737879_18737965_18740602_18740793_18742261_18742504_18742991_18743076_18743321_18743334_18744005_18744200_18765806_18765884_18771938_18772072_18791524
transcript_31602.nic	chr11	-	3104	15	NIC	ENSG00000110786.18	novel	3091	15	NA	NA	-62	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_14	9.13950831527046	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAACCTCCTGGGTCTGTGT	-18791844	False	NA	-5	True	AATAAA	-20	NA	18791860	18727931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_18729028_18729452_18729567_18729657_18729819_18732591_18732703_18733234_18733373_18733555_18733636_18737879_18737965_18740602_18740793_18742261_18742504_18742991_18743076_18743321_18743430_18744005_18744200_18765806_18765884_18771938_18772027_18791524
transcript_31603.known	chr11	-	3091	15	FSM	ENSG00000110786.18	ENST00000358540.7	3091	15	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	6.14327241121272	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGGGTCTGTGTGATT	-18791348	True	NA	-1	True	AATAAA	-24	NA	18791798	18727927	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_18729028_18729452_18729567_18729657_18729819_18732591_18732703_18733234_18733373_18733555_18733636_18737879_18737965_18740602_18740793_18742261_18742504_18742991_18743076_18743321_18743430_18744005_18744200_18765806_18765884_18771938_18772072_18791524
transcript_31604.known	chr11	-	2796	14	FSM	ENSG00000110786.18	ENST00000396168.1	2796	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_13	10.6914775549356	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAACCTCCTGGGTCTGTGT	-18791624	False	NA	-5	True	AATAAA	-20	NA	18791640	18727931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_18729028_18729452_18729567_18729657_18729819_18732591_18732703_18733234_18733373_18733555_18733636_18737879_18737965_18740602_18740793_18742261_18742504_18742991_18743076_18743321_18743430_18744005_18744200_18765806_18765884_18791524
transcript_31611.known	chr11	+	3607	3	FSM	ENSG00000151117.9	ENST00000280734.3	3607	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAATGAGGTAGCTTACTA	18698703	True	NA	NA	False	TATAAA	-18	NA	18698778	18704785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_18698908_18700932_18701198_18701572
transcript_31613.nic	chr11	-	1261	3	ISM	ENSG00000110786.18	ENST00000358540.7	3091	15	-58	37160	-58	-24320	5prime_fragment	FALSE	canonical	3	42	junction_2	5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGCCATAATCCTGTAACAT	-18791406	True	NA	NA	False	AATAAA	-21	NA	18791856	18765087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_18765884_18771938_18772072_18791524
transcript_31621.known	chr11	+	2406	17	FSM	ENSG00000177054.14	ENST00000446113.7	2406	17	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_2	52.4782320943646	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAGACTTGGTTTCTGAC	19111273	True	NA	13	True	AATAAA	-16	NA	19117167	19176415	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_19117277_19142977_19143124_19146180_19146304_19147595_19147674_19149186_19149332_19150726_19150792_19152157_19152321_19152558_19152685_19155795_19155930_19158939_19159041_19163302_19163428_19164300_19164364_19165051_19165146_19166301_19166386_19170410_19170569_19172722_19172821_19175821
transcript_31635.known	chr11	+	2283	16	FSM	ENSG00000177054.14	ENST00000399351.7	2283	16	0	0	0	0	multi-exon	TRUE	canonical	3	71	junction_1	69.9709145923425	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAGACTTGGTTTCTGAC	19111250	True	NA	13	True	AATAAA	-16	NA	19117144	19176415	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_19117277_19146180_19146304_19147595_19147674_19149186_19149332_19150726_19150792_19152157_19152321_19152558_19152685_19155795_19155930_19158939_19159041_19163302_19163428_19164300_19164364_19165051_19165146_19166301_19166386_19170410_19170569_19172722_19172821_19175821
transcript_31646.known	chr11	-	3706	13	FSM	ENSG00000129173.13	ENST00000250024.9	3706	13	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_12	14.1664215665072	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGCATTTTCATTTCGCC	-19240128	False	817	NA	False	ATTAAA	-17	NA	19240945	19224062	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_19224841_19225220_19225616_19225731_19225865_19229453_19229989_19230240_19230329_19230630_19230835_19232233_19232372_19234359_19234522_19234743_19235059_19237313_19237471_19237853_19238133_19240106_19240231_19240547
transcript_31647.known	chr11	-	3519	13	FSM	ENSG00000129173.13	ENST00000620009.4	3519	13	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_12	18.0662361572323	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTAGCATTTTCATTTC	-19240803	True	NA	NA	False	ATTAAA	-14	NA	19241620	19224065	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_19224841_19225220_19225616_19225731_19225865_19229453_19229989_19230240_19230329_19230630_19230835_19232233_19232372_19234359_19234522_19234743_19235059_19237313_19237471_19237853_19238133_19240106_19240231_19241406
transcript_31648.known	chr11	-	3432	13	FSM	ENSG00000129173.13	ENST00000527884.5	3432	13	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	13.6775871003949	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGCATTTTCATTTCGCC	-19240803	True	NA	NA	False	ATTAAA	-17	NA	19241620	19224062	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_19224841_19225220_19225616_19225731_19225865_19229453_19229989_19230240_19230329_19230630_19230835_19232233_19232372_19234359_19234522_19234743_19235059_19237313_19237471_19237853_19238133_19240106_19240231_19241496
transcript_31661.nnic	chr11	+	2586	7	NNC	ENSG00000166833.23	novel	10667	38	NA	NA	-679	983	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_6	7.31247032282677	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTAAGATTTCTTATAGC	19775050	True	NA	16	True	AATAAA	-25	NA	19777122	19934702	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_19777518_19832483_19832602_19842870_19842924_19868924_19868998_19879868_19880128_19892433_19892595_19933175
transcript_31667.known	chr11	+	886	6	FSM	ENSG00000109854.14	ENST00000421577.6	886	6	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	142.343247117663	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGATGGTGCTCTGCA	20359605	True	NA	-90	True	NA	NA	NA	20363722	20383334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_20363750_20364236_20364433_20367173_20367282_20376579_20376718_20382177_20382240_20382979
transcript_31668.known	chr11	+	1477	6	FSM	ENSG00000109854.14	ENST00000419348.6	1477	6	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_1	110.983602392426	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGCCTCTTAGATTGCT	20359625	True	NA	15	True	AATAAA	-26	NA	20363742	20383782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_20363913_20364236_20364433_20367173_20367282_20376579_20376718_20382177_20382240_20382979
transcript_31669.known	chr11	+	967	6	FSM	ENSG00000109854.14	ENST00000443524.6	967	6	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	181.361076309113	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGTTATACATATAGATC	20359607	True	NA	-56	True	AAGAAA	-30	NA	20363724	20383368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_20363799_20364236_20364433_20367173_20367282_20376579_20376718_20382177_20382240_20382979
transcript_31672.known	chr11	+	713	3	FSM	ENSG00000109854.14	ENST00000530266.5	713	3	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	175	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCCTTAATAAATGTTTG	20359567	True	NA	-25	True	AGTAAA	-36	NA	20363684	20367625	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_20363750_20364236_20364433_20367173
transcript_31673.known	chr11	+	595	3	FSM	ENSG00000109854.14	ENST00000532505.1	595	3	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_1	135.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACATGATTTTGCCTATT	20359736	False	NA	NA	False	NA	NA	NA	20363853	20367513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_20363913_20364236_20364433_20367173
transcript_31674.known	chr11	+	1830	5	FSM	ENSG00000109854.14	ENST00000451739.7	1830	5	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_4	17.2970373185699	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGCCTCTTAGATTGCT	20359596	True	NA	15	True	AATAAA	-26	NA	20363713	20383782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_20364433_20367173_20367282_20376579_20376718_20382177_20382240_20382979
transcript_31675.known	chr11	+	2552	16	FSM	ENSG00000185238.13	ENST00000331079.11	2552	16	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_10	24.3826896702467	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATATTTCAACAGGGTA	20386621	True	NA	74	True	AATAAA	-19	NA	20387715	20509338	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_20387775_20388018_20388155_20389743_20389827_20392210_20392261_20392896_20393000_20395802_20395963_20397576_20397722_20402918_20402985_20407910_20408033_20426765_20426866_20452129_20452209_20461979_20462168_20464459_20464547_20493918_20493970_20494166_20494255_20508303
transcript_31682.known	chr11	+	2530	15	FSM	ENSG00000185238.13	ENST00000330796.9	2530	15	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	98.57787246018	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGATATTATAAAAGTTTTC	20387123	False	NA	30	True	AATAAA	-43	NA	20387557	20509294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_20387775_20389743_20389827_20392210_20392261_20392896_20393000_20395802_20395963_20397576_20397722_20402918_20402985_20407910_20408033_20426765_20426866_20452129_20452209_20461979_20462168_20464459_20464547_20493918_20493970_20494166_20494255_20508303
transcript_31687.known	chr11	+	1736	14	FSM	ENSG00000185238.13	ENST00000437750.2	1736	14	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	138.904292111021	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTATATTTGGAAGAGAGAT	20386621	True	NA	NA	False	NA	NA	NA	20387715	20508708	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_20387775_20389743_20389827_20392896_20393000_20395802_20395963_20397576_20397722_20402918_20402985_20407910_20408033_20426765_20426866_20452129_20452209_20461979_20462168_20464459_20464547_20493918_20493970_20494166_20494255_20508303
transcript_31691.known	chr11	+	6947	21	FSM	ENSG00000171714.13	ENST00000684663.1	6947	21	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	11.9440361687329	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGAGAAGGTGGTAGT	22191631	True	NA	NA	False	NA	NA	NA	22193044	22283567	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_22193533_22203803_22203851_22211266_22211315_22221096_22221211_22225983_22226053_22227301_22227587_22236162_22236277_22239568_22239685_22250236_22250372_22250740_22250847_22250950_22251012_22255370_22255523_22257679_22257755_22259518_22259742_22262128_22262299_22262945_22263044_22270311_22270443_22272783_22272990_22274568_22274748_22276093_22276200_22279543
transcript_31695.known	chr11	+	749	4	FSM	ENSG00000171714.13	ENST00000683897.1	749	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	4.89897948556636	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTCTTCTTCCAAGTA	22193190	False	NA	NA	False	NA	NA	NA	22193206	22221421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_22193533_22203803_22203851_22211263_22211315_22221096
transcript_31698.known	chr11	-	4479	4	FSM	ENSG00000198168.9	ENST00000354193.5	4479	4	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_2	21.4527905462721	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACATTGTATGTTTTTGG	-22827976	True	NA	NA	False	AATAAA	-17	NA	22829801	22818926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_22823134_22827206_22827321_22827823_22827875_22829694
transcript_31701.nic	chr11	-	314	3	ISM	ENSG00000198168.9	ENST00000354193.5	4479	4	-80	8318	-80	0	5prime_fragment	FALSE	canonical	3	190	junction_1	25	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTACATCCGGGCCCCCA	-22828056	True	NA	NA	False	AATAGA	-9	NA	22829881	22827244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_22827321_22827823_22827875_22829694
transcript_31703.known	chr11	-	6285	15	FSM	ENSG00000148942.15	ENST00000396005.8	6285	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	3.99744816560949	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTAATGGGTAGATTTTA	NA	False	NA	NA	False	AATAAA	-25	NA	26722060	26667019	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_26671252_26673401_26673530_26678711_26678816_26681054_26681222_26683756_26683844_26686476_26686545_26692488_26692602_26697163_26697253_26698405_26698536_26703530_26703672_26703792_26703948_26709311_26709380_26711306_26711359_26712640_26712707_26721375
transcript_31711.known	chr11	-	745	2	FSM	ENSG00000254560.6	ENST00000531363.1	745	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGTTCAGCAATTAAACT	-27219916	True	NA	NA	False	NA	NA	NA	27220102	27217151	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_27217481_27219686
transcript_31712.known	chr11	-	1452	6	FSM	ENSG00000109881.17	ENST00000328697.11	1452	6	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_3	28.7012194862866	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTATATTGTTACTAG	-27359059	True	NA	-15	True	AATAAA	-20	NA	27363215	27338511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_27339036_27340695_27340838_27341391_27341551_27350331_27350440_27357402_27357542_27362835
transcript_31713.nic	chr11	-	801	4	ISM	ENSG00000109881.17	ENST00000328697.11	1452	6	-49	2914	-30	-2914	5prime_fragment	FALSE	canonical	3	203	junction_1	33.8263539599263	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGAAGAATGTGAGAGGA	-27363247	False	NA	19	True	AAAAAG	-38	NA	27363264	27341425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_27341551_27350331_27350440_27357402_27357542_27362835
transcript_31716.known	chr11	-	2109	3	FSM	ENSG00000109881.17	ENST00000317945.6	2109	3	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_1	6	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTCTGCAGAACTCTTG	-27359078	True	NA	NA	False	AATAAA	-19	NA	27363234	27348868	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_27350440_27357402_27357542_27362835
transcript_31718.nic	chr11	-	568	2	ISM	ENSG00000109881.17	ENST00000317945.6	2109	3	-30	8534	-30	-8534	5prime_fragment	FALSE	canonical	3	280	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAACTAGACAGTGTTCT	-27363247	False	NA	NA	False	AAAAAG	-36	NA	27363264	27357402	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_27357542_27362835
transcript_31719.nic	chr11	-	450	2	ISM	ENSG00000109881.17	ENST00000317945.6	2109	3	-30	8652	-30	-8652	5prime_fragment	FALSE	canonical	3	280	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAACCAAGAAGAACAGAAAC	-27363247	False	NA	NA	False	NA	NA	NA	27363264	27357520	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_27357542_27362835
transcript_31721.known	chr11	-	5250	18	FSM	ENSG00000205213.14	ENST00000379214.9	5250	18	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_17	26.3328442277151	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATTTTGCCTTAATTTAA	-27466684	True	NA	0	True	ATTAAA	-16	NA	27472790	27365960	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_27369144_27371614_27371699_27372282_27372399_27373550_27373677_27373974_27374047_27376298_27376371_27377157_27377224_27378696_27378769_27380270_27380340_27380639_27380712_27380894_27380967_27382187_27382257_27384335_27384408_27385252_27385469_27391093_27391166_27392446_27392519_27412788_27412861_27472117
transcript_31728.known	chr11	-	5163	17	FSM	ENSG00000205213.14	ENST00000389858.4	5163	17	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_16	66.6628644749084	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATTTTGCCTTAATTTAA	-27466669	True	NA	0	True	ATTAAA	-16	NA	27472775	27365960	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_27369144_27371614_27371699_27372282_27372399_27373550_27373677_27373974_27374047_27376298_27376371_27377157_27377224_27378696_27378769_27380270_27380340_27380639_27380712_27380894_27380967_27382187_27382257_27384335_27384408_27385252_27385469_27391093_27391166_27392446_27392519_27472117
transcript_31740.known	chr11	-	4842	5	FSM	ENSG00000148943.12	ENST00000278193.7	4842	5	0	0	0	0	multi-exon	FALSE	canonical	3	624	junction_1	26.688012290165	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTGTGTTATTTCAAG	-27490310	True	NA	-17	True	CATAAA	-15	NA	27506769	27494417	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_27498805_27499358_27499569_27501494_27501567_27501801_27501921_27506715
transcript_31755.nnic	chr11	-	1977	5	NNC	ENSG00000254934.5	novel	798	4	NA	NA	3	946	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_2	788.742194890067	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACACAGCTTCAGATATCT	-27634450	False	NA	-16	True	ATTAAA	-18	NA	27634624	27616679	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_27618024_27618111_27618179_27621289_27621366_27623949_27624146_27634330
transcript_31757.nnic	chr11	-	1031	5	NNC	ENSG00000254934.5	novel	786	3	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_2	788.742194890067	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGTCTTTAATATTTTT	-27634450	False	NA	-30	True	AATAAA	-16	NA	27634624	27617625	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_27618024_27618111_27618179_27621289_27621366_27623949_27624146_27634330
transcript_31759.nnic	chr11	-	2102	4	NNC	ENSG00000254934.5	novel	798	4	NA	NA	3	1147	at_least_one_novel_splicesite	FALSE	canonical	3	308	junction_2	783.232759501003	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGGATATAGGGTGGAACA	-27634450	False	NA	NA	False	AAGAAA	-3	NA	27634624	27616478	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_27618024_27618111_27618179_27623949_27624146_27634330
transcript_31762.nnic	chr11	-	1901	4	NNC	ENSG00000254934.5	novel	798	4	NA	NA	3	946	at_least_one_novel_splicesite	FALSE	canonical	3	308	junction_2	783.232759501003	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACACAGCTTCAGATATCT	-27634450	False	NA	-16	True	ATTAAA	-18	NA	27634624	27616679	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_27618024_27618111_27618179_27623949_27624146_27634330
transcript_31764.nnic	chr11	-	955	4	NNC	ENSG00000254934.5	novel	786	3	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	308	junction_2	783.232759501003	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGTCTTTAATATTTTT	-27634450	False	NA	-30	True	AATAAA	-16	NA	27634624	27617625	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_27618024_27618111_27618179_27623949_27624146_27634330
transcript_31765.nnic	chr11	-	964	4	NNC	ENSG00000254934.5	novel	786	3	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	72	junction_1	882.641615958721	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGTCTTTAATATTTTT	-27634450	False	NA	-30	True	AATAAA	-16	NA	27634624	27617625	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_27618024_27621289_27621366_27623949_27624146_27634330
transcript_31771.known	chr11	-	786	3	FSM	ENSG00000254934.5	ENST00000527083.5	786	3	0	0	0	0	multi-exon	FALSE	canonical	3	642	junction_1	691	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGTCTTTAATATTTTT	-27587646	True	NA	-30	True	AATAAA	-16	NA	27634522	27617625	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_27618024_27623949_27624146_27634330
transcript_31772.nnic	chr11	-	1989	3	NIC	ENSG00000254934.5	novel	798	4	NA	NA	3	946	combination_of_known_splicesites	FALSE	canonical	3	308	junction_1	858	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACACAGCTTCAGATATCT	-27634450	False	NA	-16	True	ATTAAA	-18	NA	27634624	27616679	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_27618179_27623949_27624146_27634330
transcript_31777.nnic	chr11	-	1043	3	NIC	ENSG00000254934.5	novel	786	3	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	308	junction_1	858	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGTCTTTAATATTTTT	-27634450	False	NA	-30	True	AATAAA	-16	NA	27634624	27617625	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_27618179_27623949_27624146_27634330
transcript_31778.nic	chr11	-	593	2	ISM	ENSG00000254934.5	ENST00000534757.1	798	4	3	5854	3	-5854	5prime_fragment	FALSE	canonical	3	2024	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTAGACTGACAACCTG	-27634450	False	NA	-14	True	GATAAA	-18	NA	27634624	27623846	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_27624146_27634330
transcript_31780.nnic	chr11	-	676	2	NNC	ENSG00000254934.5	novel	786	3	NA	NA	46	-11115	at_least_one_novel_splicesite	FALSE	canonical	3	672	junction_1	0	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-27587705	True	NA	1	True	ATTAAA	-21	NA	27634581	27629107	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_27629533_27634330
transcript_31781.known	chr11	-	3985	2	FSM	ENSG00000176697.20	ENST00000356660.9	3985	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGGGTTCTGGGTTTTT	-27699220	True	NA	NA	False	CATAAA	-2	NA	27700455	27654892	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_27658586_27700163
transcript_31784.known	chr11	-	3417	17	FSM	ENSG00000121621.7	ENST00000263181.7	3417	17	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_8	24.5531948023063	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTTTCTTGTCTCATT	-28105164	True	NA	-4	True	ATTAAA	-19	NA	28108156	28020618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_28021283_28023740_28023851_28035386_28035495_28036216_28036665_28058925_28059162_28062394_28062517_28069258_28069424_28077006_28077170_28082855_28082969_28083168_28083244_28084631_28084809_28088523_28088722_28090616_28090728_28091408_28091514_28094642_28094801_28097622_28097994_28108063
transcript_31797.known	chr11	-	744	2	FSM	ENSG00000121621.7	ENST00000526288.1	744	2	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGTTTTCTCATAACCT	-28105153	True	NA	NA	False	ATTAAA	-22	NA	28108145	28097331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_28097994_28108063
transcript_31799.known	chr11	+	4208	7	FSM	ENSG00000169519.21	ENST00000407364.8	4208	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	42.7450451969452	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGACTGCCTTCTATG	28107890	True	NA	19	True	AATAAA	-16	NA	28108387	28333507	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_28108453_28110165_28110402_28113317_28113605_28211061_28211199_28290205_28290398_28296752_28296932_28330395
transcript_318.known	chr1	+	1085	4	FSM	ENSG00000237491.10	ENST00000669749.1	1085	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATGAGAATGATCTTACT	778470	True	NA	NA	False	AATAAA	-2	NA	778808	810047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_779093_803918_804223_807216_807324_809657
transcript_31802.known	chr11	+	4304	7	FSM	ENSG00000169519.21	ENST00000406787.7	4304	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	48.5366413707784	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGACTGCCTTCTATG	NA	False	NA	19	True	AATAAA	-16	NA	28108247	28333507	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_28108453_28110165_28110402_28113317_28113605_28211061_28211199_28290205_28290398_28296796_28296932_28330395
transcript_31805.known	chr11	+	718	4	FSM	ENSG00000169519.21	ENST00000634762.1	718	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	71.8903486027312	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATAATAAAAGTTATTGTG	28108404	True	NA	NA	False	AATAAA	-17	NA	28110314	28145747	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_28110402_28113317_28113605_28134545_28134646_28145503
transcript_31807.known	chr11	+	2373	4	FSM	ENSG00000152219.5	ENST00000282032.4	2373	4	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_2	38.8186667582606	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTTTTCATTGTTAGCG	30318996	True	NA	8	True	AATAAA	-16	NA	30323103	30338223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_30323203_30330885_30331375_30332865_30332994_30336566
transcript_31811.nic	chr11	+	707	3	ISM	ENSG00000152219.5	ENST00000282032.4	2373	4	-41	5280	-41	0	5prime_fragment	FALSE	canonical	3	251	junction_2	47.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAGAAAAAAGAAGGCT	30318955	True	NA	NA	False	NA	NA	NA	30323062	30332943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_30323203_30330885_30331375_30332865
transcript_31814.known	chr11	+	587	2	FSM	ENSG00000152219.5	ENST00000532047.1	587	2	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGAATTCTACCATGTAG	30319025	True	NA	NA	False	NA	NA	NA	30323132	30331402	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_30323203_30330885
transcript_31815.known	chr11	-	2562	7	FSM	ENSG00000066382.17	ENST00000358117.10	2562	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	3.81881307912987	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGTGCTGTTTAGAGGGTT	-30586209	True	NA	1	True	AATAAA	-18	NA	30586353	30410223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_30411587_30414227_30414342_30417517_30417634_30495295_30495522_30535993_30536176_30580245_30580495_30586041
transcript_31821.known	chr11	-	733	6	FSM	ENSG00000148950.11	ENST00000532287.6	733	6	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_2	88.6191852817436	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAGTTGTTTTTAATTG	-31506845	True	NA	-5	True	AATAAA	-15	NA	31509622	31432400	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_31432569_31433459_31433571_31456259_31456387_31460625_31460715_31463171_31463306_31509518
transcript_31827.known	chr11	+	2970	5	FSM	ENSG00000170946.15	ENST00000465995.6	2970	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	20.994046775217	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTGTGTTTTCTTTTAC	31367412	True	NA	7	True	AATAAA	-15	NA	31369859	31432835	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_31369913_31370715_31370860_31414810_31414950_31426286_31426356_31430270
transcript_31831.known	chr11	-	486	5	FSM	ENSG00000148950.11	ENST00000527184.5	486	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	43.5394935661866	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATGGCATACTGCTAATG	-31506815	True	NA	NA	False	NA	NA	NA	31509592	31449029	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_31449092_31456259_31456387_31460625_31460715_31463171_31463306_31509518
transcript_31833.known	chr11	-	985	5	FSM	ENSG00000148950.11	ENST00000532624.5	985	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	40.0835065831322	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCACTGCTTTATCAGAAA	-31506828	True	NA	NA	False	NA	NA	NA	31509605	31452544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_31453093_31456259_31456387_31460625_31460715_31463171_31463306_31509518
transcript_31835.known	chr11	-	469	4	FSM	ENSG00000148950.11	ENST00000526776.5	469	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	124.212184050787	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAGTTGTTTTTAATTG	-31506797	True	NA	-5	True	AATAAA	-15	NA	31509574	31432400	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_31432569_31433459_31433571_31463171_31463306_31509518
transcript_31837.known	chr11	+	2745	3	FSM	ENSG00000170946.15	ENST00000529086.5	2745	3	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	4	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTTTTGAATACCGTTA	31367392	True	NA	NA	False	AATAAA	-18	NA	31369839	31417338	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_31369913_31370715_31370860_31414810
transcript_31839.known	chr11	-	314	3	FSM	ENSG00000148950.11	ENST00000533642.1	314	3	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_2	78.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCTTTTGACTTGATTA	-31506868	True	NA	-97	True	NA	NA	NA	31509645	31432492	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_31432569_31433459_31433571_31509518
transcript_31842.known	chr11	-	1067	3	FSM	ENSG00000148950.11	ENST00000528161.5	1067	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAACTCCCATGACACCA	-31506786	True	NA	NA	False	NA	NA	NA	31509563	31452197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_31453093_31456259_31456387_31509518
transcript_31843.known	chr11	-	735	2	FSM	ENSG00000148950.11	ENST00000532668.1	735	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATATAGACACCTATATT	-31506831	True	NA	NA	False	AATAAA	-12	NA	31509608	31477114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_31477760_31509518
transcript_31844.nic	chr11	+	1565	10	NIC	ENSG00000109911.19	novel	1961	12	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	51.9881277995156	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAAGATTCCTGACAGTG	31507243	True	NA	10	True	AATAAA	-19	NA	31509749	31783775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_31510008_31520055_31520092_31539661_31539784_31594769_31594906_31603767_31603908_31627109_31627195_31632216_31632406_31647740_31647850_31650114_31650222_31783392
transcript_31847.known	chr11	+	2369	6	FSM	ENSG00000049449.10	ENST00000054950.4	2369	6	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_5	127.426841756358	729	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTTTTCTAGGTCATTT	32075687	True	NA	13	True	AATAAA	-18	NA	32091073	32105722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_32091451_32097143_32097338_32098349_32098529_32100547_32100609_32103280_32103481_32104364
transcript_31854.known	chr11	+	5047	11	FSM	ENSG00000149100.13	ENST00000531120.6	5047	11	0	0	0	0	multi-exon	FALSE	canonical	3	2368	junction_3	231.308646617458	1309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTTCATAAAATTCATTTA	32548735	True	NA	7	True	AATAAA	-20	NA	32583830	32606264	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_32583930_32587011_32587145_32588593_32588733_32589011_32589136_32589546_32589642_32593865_32593950_32594913_32595014_32595965_32596048_32600688_32600833_32601761_32601823_32602278
transcript_31879.known	chr11	+	1207	8	FSM	ENSG00000149100.13	ENST00000524896.5	1207	8	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_1	911.795313586087	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTTTTCCAACGTCTC	32548738	True	NA	NA	False	NA	NA	NA	32583833	32602823	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_32583930_32589546_32589642_32593865_32593950_32594913_32595014_32595965_32596048_32600688_32600833_32601761_32601823_32602278
transcript_31885.known	chr11	+	5543	6	FSM	ENSG00000135378.4	ENST00000257836.4	5543	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	1.74355957741627	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTATTGCTTGTTTCAT	32829809	True	NA	5	True	AATAAA	-16	NA	32829926	32858120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_32830174_32830507_32830633_32836657_32836822_32838881_32838931_32840106_32840240_32853295
transcript_31887.known	chr11	+	9706	13	FSM	ENSG00000060749.16	ENST00000650167.2	9706	13	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	46.0024153955227	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAATGTTTGGGGTTTTT	32891418	True	NA	NA	False	ATTAAA	-29	NA	32892810	32980270	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_32893335_32927156_32927270_32927961_32928124_32931742_32935436_32953856_32954180_32955295_32955413_32955987_32956122_32957868_32958087_32966299_32966438_32969045_32969144_32973396_32973550_32975247_32975344_32976333
transcript_31890.known	chr11	+	1741	9	FSM	ENSG00000121690.11	ENST00000241051.8	1741	9	0	0	0	0	multi-exon	TRUE	canonical	3	42	junction_3	7.37288105152931	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCGTGTGTCAGAAGCTAT	33015339	True	NA	14	True	AATAAA	-16	NA	33015877	33033582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_33016029_33025658_33026050_33027685_33027814_33028602_33028793_33031377_33031590_33032335_33032479_33032667_33032794_33032888_33032968_33033261
transcript_31894.known	chr11	-	2911	22	FSM	ENSG00000176102.13	ENST00000524827.6	2911	22	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_21	93.3739464601932	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAGAAACATCATGCTTC	-33151156	True	NA	-16	True	AATAAA	-4	NA	33161494	33084594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_33085290_33085712_33085774_33085894_33085990_33086987_33087142_33090531_33090728_33092270_33092341_33096305_33096409_33096834_33096979_33098689_33098765_33099033_33099151_33099607_33099718_33102176_33102340_33103106_33103185_33105566_33105694_33105882_33105918_33105997_33106065_33107902_33108001_33108385_33108419_33141666_33141763_33141884_33141987_33156707_33156804_33161298
transcript_31896.known	chr11	-	2812	21	FSM	ENSG00000176102.13	ENST00000323959.9	2812	21	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_15	100.97999801941	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGCTTCCTCTGCTTCTT	-33151142	True	NA	-5	True	AATAAA	-15	NA	33161480	33084583	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_33085290_33085712_33085774_33085894_33085990_33086987_33087142_33090531_33090728_33092270_33092341_33096305_33096409_33096834_33096979_33098689_33098765_33099033_33099151_33099607_33099718_33102176_33102340_33103106_33103185_33105566_33105694_33105882_33105918_33105997_33106065_33107902_33108001_33108385_33108419_33141666_33141763_33141884_33141987_33161298
transcript_31904.known	chr11	+	2649	10	FSM	ENSG00000176148.16	ENST00000334274.9	2649	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	5.82035593498169	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGGAATTAGATTTAACT	33037733	True	NA	8	True	ATTAAA	-1	NA	33039571	33073550	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_33039793_33043749_33043937_33054592_33054726_33057114_33057236_33057918_33058140_33058958_33059096_33061529_33061727_33065829_33066012_33068686_33068860_33072473
transcript_31912.known	chr11	+	2633	10	FSM	ENSG00000176148.16	ENST00000432887.5	2633	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	10.3279555898864	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAACTGTTTTCAGATAAA	33040001	False	NA	21	True	ATTAAA	-14	NA	33040014	33073563	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_33040207_33043749_33043937_33054592_33054726_33057114_33057236_33057918_33058140_33058958_33059096_33061529_33061727_33065829_33066012_33068686_33068860_33072473
transcript_31915.nnic	chr11	-	1012	4	NNC	ENSG00000176102.13	novel	2812	21	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	212.822826678802	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGCTTCCTCTGCTTCTT	-33151181	True	NA	-5	True	AATAAA	-15	NA	33161519	33084583	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_33085290_33085712_33085774_33141962_33141987_33161298
transcript_31918.known	chr11	-	1132	3	FSM	ENSG00000176102.13	ENST00000438862.6	1132	3	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_2	4	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTGAAGACTGGAATTA	NA	False	NA	NA	False	TTTAAA	-45	NA	33161531	33140965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_33141763_33141884_33141987_33161298
transcript_31919.known	chr11	-	715	2	FSM	ENSG00000176102.13	ENST00000431742.2	715	2	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGTTGCAACAACATTAAAA	-33151153	True	NA	17	True	NA	NA	NA	33161491	33141464	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_33141987_33161298
transcript_3192.known	chr1	+	2129	13	FSM	ENSG00000184908.20	ENST00000375667.7	2129	13	0	0	0	0	multi-exon	TRUE	canonical	2	10	junction_2	3.8613109460677	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGTCCATCCCTCATC	16048702	True	NA	14	True	AATAAA	-14	NA	16048788	16057308	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_16049246_16049617_16049703_16049814_16049917_16050515_16050601_16050874_16051049_16051477_16051548_16051709_16051821_16052197_16052412_16053638_16053773_16055434_16055524_16055677_16055759_16056421_16056509_16056868
transcript_31921.known	chr11	-	678	5	FSM	ENSG00000085063.17	ENST00000351554.8	678	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	175.074269954211	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGCTAAGATAGAGGGGC	-33731447	True	NA	-26	True	AATAAA	-15	NA	33736479	33709995	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_33710344_33717369_33717472_33722378_33722464_33731423_33731469_33736381
transcript_31927.known	chr11	-	7563	4	FSM	ENSG00000085063.17	ENST00000642928.2	7563	4	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_3	58.0746645850552	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCCTTTAATATGTAATAA	-33731391	True	NA	NA	False	AATATA	-25	NA	33736423	33703009	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_33710344_33717369_33717472_33722378_33722464_33736381
transcript_31932.known	chr11	-	2403	11	FSM	ENSG00000110429.14	ENST00000265651.8	2403	11	0	0	0	0	multi-exon	TRUE	canonical	3	121	junction_1	30.4197304393053	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTATTTTGTATAATTG	-33772570	True	NA	-6	True	TTTAAA	-19	NA	33774520	33740943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_33742085_33747129_33747321_33748776_33748893_33750538_33750662_33751522_33751608_33754454_33754501_33755770_33755976_33758486_33758602_33768850_33769015_33770740_33770831_33774393
transcript_31934.nnic	chr11	-	1672	11	NNC	ENSG00000110429.14	novel	1672	10	NA	NA	-4	-1037	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	63.1819594504634	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAGGCTACTGATGGTTG	NA	False	NA	-2	True	AATAAA	-17	NA	33774547	33742775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_33743159_33747129_33747321_33748776_33748893_33750538_33750662_33751522_33751608_33754454_33754501_33755770_33755976_33758486_33758602_33768850_33769015_33770740_33770831_33774393
transcript_31936.known	chr11	-	1672	10	FSM	ENSG00000110429.14	ENST00000448981.6	1672	10	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_4	13.1749856513615	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTGTGGATGTGTAC	NA	False	NA	NA	False	AATAAA	-33	NA	33774543	33746742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_33747321_33748776_33748893_33750538_33750662_33751522_33751608_33754454_33754501_33755770_33755976_33758486_33758602_33768850_33769015_33770740_33770831_33774393
transcript_31941.known	chr11	-	2081	6	FSM	ENSG00000135363.12	ENST00000257818.3	2081	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.68781778291716	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTGTTGTTTATTTGAT	NA	False	NA	NA	False	AATAAA	-16	NA	33892076	33858575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_33859576_33864601_33864818_33869345_33869587_33869709_33869988_33881823_33881888_33891794
transcript_31942.known	chr11	-	1687	3	FSM	ENSG00000135363.12	ENST00000395833.7	1687	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTGTTGTTTATTTGAT	-33869749	True	NA	NA	False	AATAAA	-16	NA	33869816	33858575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_33859576_33864601_33864818_33869345
transcript_31944.known	chr11	+	5514	19	FSM	ENSG00000135387.21	ENST00000341394.9	5514	19	0	0	0	0	multi-exon	FALSE	canonical	2	458	junction_1	238.869850662564	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTCTCACTGTCCTTG	34045070	True	NA	13	True	ATTAAA	-14	NA	34051730	34102610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_34051872_34052420_34052637_34071725_34071789_34071900_34071988_34076235_34076475_34076559_34076643_34079627_34079766_34082824_34082878_34082954_34083042_34086063_34086220_34086304_34086414_34089394_34089457_34090178_34090290_34090528_34090679_34091905_34092057_34096478_34096674_34097195_34097297_34097697_34097762_34099302
transcript_31948.known	chr11	+	3498	18	FSM	ENSG00000135387.21	ENST00000389645.7	3498	18	0	0	0	0	multi-exon	FALSE	canonical	2	458	junction_1	242.271474028677	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAATGAATGAGTACTGG	34045071	True	NA	7	True	AATAAA	-14	NA	34051731	34099054	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_34051872_34052420_34052637_34071725_34071789_34071900_34071988_34076235_34076475_34076559_34076643_34079627_34079766_34082824_34082878_34082954_34083042_34086063_34086220_34086304_34086414_34089394_34089457_34090178_34090290_34090528_34090679_34091905_34092057_34096478_34096674_34097195_34097297_34097697
transcript_31953.known	chr11	+	3438	18	FSM	ENSG00000135387.21	ENST00000532820.5	3438	18	0	0	0	0	multi-exon	FALSE	canonical	2	971	junction_12	136.083045070682	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTGATGGTATAAGCAAAA	34045549	False	NA	-38	True	NA	NA	NA	34052209	34100464	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_34052637_34071725_34071789_34071900_34071988_34076235_34076475_34076559_34076643_34079627_34079766_34082824_34082878_34082954_34083042_34086063_34086220_34086304_34086414_34089394_34089457_34090178_34090290_34090528_34090679_34091905_34092057_34096478_34096674_34097195_34097297_34097697_34097762_34099302
transcript_31959.known	chr11	+	3454	17	FSM	ENSG00000135387.21	ENST00000530820.5	3454	17	0	0	0	0	multi-exon	FALSE	canonical	2	971	junction_12	128.930804479573	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAATGAGTACTGGTGGA	34036339	True	NA	11	True	AATAAA	-18	NA	34052328	34099058	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_34052637_34071725_34071789_34071900_34071988_34076235_34076475_34076559_34076643_34079627_34079766_34082824_34082878_34082954_34083042_34086063_34086220_34086304_34086414_34089394_34089457_34090178_34090290_34090528_34090679_34091905_34092057_34096478_34096674_34097195_34097297_34097697
transcript_3196.known	chr1	-	1720	7	FSM	ENSG00000185519.9	ENST00000375662.5	1720	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	4.11298755975102	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCTTGGCCTGGTCTCTG	-16073533	True	NA	0	True	ATTAAA	-20	NA	16073651	16057768	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_16058718_16059493_16059605_16059868_16060052_16062098_16062193_16062498_16062535_16063520_16063637_16073420
transcript_3197.nnic	chr1	-	3925	17	NNC	ENSG00000142627.13	novel	3946	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	24.9354635759995	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCTTTCAGTCTTGGG	-16153978	True	NA	1	True	AATAAA	-22	NA	16156069	16124336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_16125321_16129433_16129569_16130225_16130420_16131720_16131871_16132063_16132274_16132377_16132440_16133179_16133369_16133480_16133607_16133859_16133916_16134467_16134568_16135035_16135190_16135654_16135771_16137852_16138186_16138274_16138431_16148377_16149048_16150895_16150964_16155847
transcript_31975.known	chr11	+	3973	29	FSM	ENSG00000135372.10	ENST00000257829.8	3973	29	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_13	28.0641348212502	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTGCCTGTGAGTGTTC	34097866	True	NA	31	True	AATAAA	-17	NA	34105628	34146908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_34105793_34108210_34108334_34108741_34108834_34112051_34112224_34113715_34113839_34115822_34115885_34118179_34118295_34118395_34118504_34122458_34122593_34123761_34123856_34124301_34124401_34127462_34127600_34130812_34130938_34131380_34131532_34132124_34132222_34133025_34133143_34134318_34134421_34134511_34134587_34135174_34135292_34136641_34136776_34136977_34137027_34139190_34139288_34139384_34139496_34140399_34140573_34141088_34141209_34141718_34141818_34142274_34142349_34143444_34143529_34146083
transcript_31976.nnic	chr11	+	3970	29	NNC	ENSG00000135372.10	novel	3973	29	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	61.3143040207668	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTGCCTGTGAGTGTTC	34097839	True	NA	31	True	AATAAA	-17	NA	34105601	34146908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_34105793_34108240_34108334_34108741_34108834_34112051_34112224_34113715_34113839_34115822_34115885_34118179_34118295_34118395_34118504_34122458_34122593_34123761_34123856_34124301_34124401_34127462_34127600_34130812_34130938_34131380_34131532_34132124_34132222_34133025_34133143_34134318_34134421_34134511_34134587_34135174_34135292_34136641_34136776_34136977_34137027_34139190_34139288_34139384_34139496_34140399_34140573_34141088_34141209_34141718_34141818_34142274_34142349_34143444_34143529_34146083
transcript_31980.known	chr11	+	3436	27	FSM	ENSG00000135372.10	ENST00000531159.6	3436	27	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	63.2719896522641	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGCCCAGGAGGCTGCT	34097854	True	NA	NA	False	NA	NA	NA	34105616	34146574	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_34105793_34112051_34112224_34113715_34113839_34115822_34115885_34118179_34118295_34118395_34118504_34122458_34122593_34123761_34123856_34124301_34124401_34127462_34127600_34130812_34130938_34131380_34131532_34132124_34132222_34133025_34133143_34134318_34134421_34134511_34134587_34135174_34135292_34136641_34136776_34136977_34137027_34139190_34139288_34139384_34139496_34140399_34140573_34141088_34141209_34141718_34141818_34142274_34142349_34143444_34143529_34146083
transcript_31990.known	chr11	-	4905	17	FSM	ENSG00000166016.6	ENST00000435224.3	4905	17	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_16	5.10170008428563	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCCTCACTGCTCCTG	-34357484	True	NA	0	True	AATAAA	-17	NA	34358010	34150986	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_34152585_34154264_34154379_34154700_34154770_34159295_34159387_34159905_34160009_34160247_34160354_34160902_34161082_34162575_34162806_34164685_34164822_34165259_34165357_34167258_34167361_34167902_34167993_34170905_34171072_34173154_34173308_34197324_34197539_34204543_34204691_34356700
transcript_31996.known	chr11	+	2291	13	FSM	ENSG00000121691.7	ENST00000241052.5	2291	13	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_8	13.5820551545862	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGGTATTTTCTTTCTT	34437578	True	NA	9	True	AATAAA	-20	NA	34438933	34472060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_34439080_34449191_34449364_34450987_34451099_34452076_34452208_34453089_34453195_34453800_34453927_34456010_34456203_34456664_34456818_34461250_34461390_34464104_34464236_34468287_34468396_34470957_34471042_34471367
transcript_32.known	ERCC-00078	+	977	1	FSM	ERCC-00078A	DQ883673	977	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	977	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00078_+_0_1000
transcript_320.known	chr1	+	5441	3	FSM	ENSG00000228794.11	ENST00000669922.1	5441	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	29	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCATGCCACTATATATT	826892	True	NA	NA	False	NA	NA	NA	827602	846365	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_827776_829002_829105_841199
transcript_32004.known	chr11	+	2500	11	FSM	ENSG00000110435.13	ENST00000227868.9	2500	11	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_5	46.4207927549713	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTCTAGAACACCTTTA	34910616	True	NA	23	True	AATAAA	-19	NA	34916617	34996128	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_34916816_34931403_34931485_34947505_34947607_34957383_34957584_34960419_34960519_34966639_34966815_34970138_34970287_34978123_34978183_34984569_34984729_34992314_34992380_34994913
transcript_32008.known	chr11	+	952	6	FSM	ENSG00000110435.13	ENST00000430469.6	952	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	182.999453551097	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATGTTTATTTATTTAA	34910630	True	NA	NA	False	AAGAAA	-45	NA	34916631	34995275	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_34916816_34931403_34931485_34947505_34947607_34984569_34984729_34992314_34992380_34994913
transcript_3201.known	chr1	-	3946	17	FSM	ENSG00000142627.13	ENST00000358432.8	3946	17	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_16	15.4584877575395	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCTTTCAGTCTTGGG	-16153978	True	NA	1	True	AATAAA	-22	NA	16156069	16124336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_16125321_16129433_16129590_16130225_16130420_16131720_16131871_16132063_16132274_16132377_16132440_16133179_16133369_16133480_16133607_16133859_16133916_16134467_16134568_16135035_16135190_16135654_16135771_16137852_16138186_16138274_16138431_16148377_16149048_16150895_16150964_16155847
transcript_32011.known	chr11	-	1246	7	FSM	ENSG00000149089.13	ENST00000395787.4	1246	7	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_5	13.6381816969859	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCCCTCAATGTTAATG	-34911686	True	NA	-4	True	AATAAA	-21	NA	34916379	34882294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_34882817_34883336_34883505_34888292_34888429_34888751_34888870_34890503_34890553_34895009_34895111_34916227
transcript_32012.nic	chr11	-	513	5	ISM	ENSG00000149089.13	ENST00000395787.4	1246	7	-4	6045	-4	-5970	5prime_fragment	FALSE	canonical	3	279	junction_3	16.5586080332859	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGATGATAAAAGGAATAAA	-34911690	True	NA	NA	False	TTTAAA	-13	NA	34916383	34888339	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_34888429_34888751_34888870_34890503_34890553_34895009_34895111_34916227
transcript_32013.known	chr11	+	2369	17	FSM	ENSG00000026508.21	ENST00000415148.6	2369	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	10.5881714663109	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTTTGTGTTTTGTT	35138632	True	NA	22	True	CATAAA	-14	NA	35139169	35229468	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_35139371_35176574_35176741_35180273_35180408_35186831_35186901_35189834_35190066_35198120_35198247_35201081_35201196_35201670_35201788_35204511_35204641_35206111_35206244_35208104_35208207_35209964_35210055_35211245_35211450_35214851_35214915_35219315_35219388_35221653_35221733_35229128
transcript_32015.known	chr11	+	2292	12	FSM	ENSG00000026508.21	ENST00000433892.6	2292	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	7.47558007920865	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTGTGCTGTGATTCTT	35138650	True	NA	9	True	AATAAA	-24	NA	35139187	35230027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_35139371_35176574_35176741_35180273_35180408_35186831_35186901_35189834_35190066_35208104_35208207_35209964_35210055_35211245_35211450_35214851_35214915_35219315_35219388_35221653_35221733_35229128
transcript_32016.known	chr11	+	1634	10	FSM	ENSG00000026508.21	ENST00000434472.6	1634	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	8.20568908339411	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCACCAGCTAAGGACATT	35138755	False	NA	NA	False	NA	NA	NA	35139292	35229666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_35139371_35176574_35176741_35180273_35180408_35186831_35186901_35189834_35190066_35211245_35211450_35214851_35214915_35219315_35219388_35221653_35221733_35229128
transcript_32017.known	chr11	+	4288	9	FSM	ENSG00000026508.21	ENST00000263398.11	4288	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	6.28490254498827	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGAAGTCTCTAATTTAA	35138633	True	NA	14	True	ATTAAA	-32	NA	35139170	35232402	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_35139371_35176574_35176741_35180273_35180408_35186831_35186901_35189834_35190066_35214851_35214915_35219315_35219388_35221653_35221733_35229128
transcript_32019.known	chr11	-	2785	12	FSM	ENSG00000149090.13	ENST00000622144.4	2785	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	4.18774283864764	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTATGCTCTTATTTCT	-35525499	True	NA	NA	False	AATAAA	-32	NA	35525623	35431822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_35432893_35434511_35434805_35435902_35436136_35439626_35439694_35441480_35441694_35451887_35451939_35468000_35468109_35470600_35470819_35474629_35474745_35492044_35492174_35494095_35494273_35525512
transcript_32020.known	chr11	-	2723	11	FSM	ENSG00000149090.13	ENST00000619888.5	2723	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	2.76405499221705	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGTGCTATGCTCTTAT	-35525492	True	NA	NA	False	AATAAA	-28	NA	35525616	35431826	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_35432893_35434511_35434805_35435902_35436136_35439626_35439694_35441480_35441694_35468000_35468109_35470600_35470819_35474629_35474745_35492044_35492174_35494095_35494273_35525512
transcript_32023.known	chr11	+	2406	1	FSM	ENSG00000179431.7	ENST00000317811.6	2406	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTAATTCCTGTGGTTT	35617527	True	NA	9	True	AATAAA	-18	NA	35618459	35620865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_35618500_35620900
transcript_32026.known	chr11	+	12994	5	FSM	ENSG00000166326.7	ENST00000299413.7	12994	5	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_2	25.7342184649155	235	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTCTCAGGTGTTTCTT	35660488	True	NA	3	True	ATTAAA	-16	NA	35662774	35818007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_35663781_35685258_35685337_35725923_35726164_35735425_35735446_35806357
transcript_32038.known	chr11	+	3814	6	FSM	ENSG00000179241.13	ENST00000315571.6	3814	6	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_4	10.8369737473153	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTGTGCAAATGGTCC	35941474	True	NA	8	True	AATAAA	-18	NA	35944061	36232136	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_35944145_36036102_36036250_36081652_36081779_36098326_36098462_36227084_36227431_36229159
transcript_32041.nic	chr11	+	3506	5	NIC	ENSG00000179241.13	novel	3814	6	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	49.9368351019566	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTGTGCAAATGGTCC	35941436	True	NA	8	True	AATAAA	-18	NA	35944023	36232136	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_35944145_36036102_36036250_36081652_36081779_36098326_36098462_36229159
transcript_32044.known	chr11	+	1879	5	FSM	ENSG00000179241.13	ENST00000528989.5	1879	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	43.5229824345713	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTAACTTGAGTTGGCCCA	NA	False	NA	NA	False	NA	NA	NA	35943980	36230267	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_35944145_36081652_36081779_36098326_36098462_36227084_36227431_36229159
transcript_32047.known	chr11	-	2949	6	FSM	ENSG00000110442.12	ENST00000263401.10	2949	6	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_3	20.6842935581566	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCGTGATCATTTAAGGCA	-36286478	True	NA	NA	False	AATAAA	-17	NA	36289424	36272291	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_36274773_36276136_36276241_36277088_36277124_36278476_36278617_36280711_36280838_36289361
transcript_32049.known	chr11	-	917	5	FSM	ENSG00000110442.12	ENST00000452374.6	917	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	124.407345040395	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATGGAGGGAATCGGACA	-36286503	True	NA	NA	False	NA	NA	NA	36289449	36274222	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_36274773_36276136_36276241_36277088_36277124_36278476_36278617_36289361
transcript_32051.nnic	chr11	-	1208	5	NIC	ENSG00000110442.12	novel	2949	6	NA	NA	-6	0	intron_retention	FALSE	canonical	2	5	junction_1	117.486169398785	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGATTTTTGTAGCTTCTT	NA	False	NA	-4	True	ACTAAA	-19	NA	36289455	36273959	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_36274773_36277088_36277124_36278476_36278617_36280711_36280838_36289361
transcript_32056.nic	chr11	+	2511	9	ISM	ENSG00000135362.14	ENST00000378867.7	3930	10	361	1528	-15	0	3prime_fragment	FALSE	canonical	0	0	junction_1	1.99608992783391	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATCTTGCACTGTTCATTT	36376261	True	NA	15	True	TTTAAA	-30	NA	36376365	36463676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_36376705_36400996_36401286_36403297_36403379_36419254_36419304_36431852_36431911_36437384_36437477_36446299_36446441_36451208_36451336_36462341
transcript_32062.known	chr11	-	7885	7	FSM	ENSG00000175104.15	ENST00000526995.6	7885	7	0	0	0	0	multi-exon	FALSE	canonical	1	16	junction_3	14.1037819986934	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATAGTCCAAGTGGTTT	-36509301	True	NA	-14	True	ATTAAA	-21	NA	36510272	36483768	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_36490651_36492550_36492629_36494975_36495048_36497107_36497267_36498489_36498641_36501219_36501538_36510047
transcript_3207.nic	chr1	-	3905	16	NIC	ENSG00000142627.13	novel	3946	17	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_15	22.4582575756298	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCTTTCAGTCTTGGG	-16154005	True	NA	1	True	AATAAA	-22	NA	16156096	16124336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_16125321_16129433_16129590_16130225_16130420_16131720_16131871_16132063_16132274_16132377_16132440_16133179_16133369_16133480_16133607_16133859_16133916_16134467_16134568_16135035_16135190_16135654_16135771_16137852_16138186_16138274_16138431_16148377_16149048_16155847
transcript_32071.known	chr11	+	866	6	FSM	ENSG00000166352.18	ENST00000334307.10	866	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	9.81019877474458	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTTTGTGGAAATTTAC	36593869	True	NA	11	True	AATAAA	-18	NA	36594501	36659272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_36594593_36610080_36610240_36633283_36633439_36636050_36636118_36648015_36648156_36659018
transcript_32072.known	chr11	+	930	6	FSM	ENSG00000166352.18	ENST00000531554.6	930	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	8.49941174435031	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACATGTGTGCACTCATT	36593869	True	NA	26	True	AATAAA	-33	NA	36594501	36659287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_36594642_36610080_36610240_36633283_36633439_36636050_36636118_36648015_36648156_36659018
transcript_32073.known	chr11	+	633	4	FSM	ENSG00000166352.18	ENST00000347206.8	633	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	16.6733320005331	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTTTGTGGAAATTTAC	36593880	True	NA	11	True	AATAAA	-18	NA	36594512	36659272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_36594593_36610080_36610240_36648015_36648156_36659018
transcript_32089.nic	chr11	+	3724	25	NIC	ENSG00000052841.15	novel	4488	24	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	453	junction_19	127.838215628192	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAACCAATCATTGTCAG	43358872	True	NA	NA	False	AAAAAG	-9	NA	43358884	43493961	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708_43396819_43397346_43397492_43397973_43398114_43399887_43400049_43401445_43401559_43403997_43404145_43405513_43405630_43405785_43405952_43407137_43407216_43407352_43407578_43414589_43414777_43436163_43436335_43443324_43443585_43444055_43444210_43448001_43448123_43450081_43450242_43451181_43451266_43490238_43490359_43492019_43492164_43493772
transcript_32090.nic	chr11	+	4694	25	NIC	ENSG00000052841.15	novel	4488	24	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	453	junction_19	127.838215628192	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTCTGTCATGTGATTTT	43358872	True	NA	7	True	AATAAA	-18	NA	43358884	43494931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708_43396819_43397346_43397492_43397973_43398114_43399887_43400049_43401445_43401559_43403997_43404145_43405513_43405630_43405785_43405952_43407137_43407216_43407352_43407578_43414589_43414777_43436163_43436335_43443324_43443585_43444055_43444210_43448001_43448123_43450081_43450242_43451181_43451266_43490238_43490359_43492019_43492164_43493772
transcript_32095.known	chr11	+	4488	24	FSM	ENSG00000052841.15	ENST00000039989.9	4488	24	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_16	189.520327752408	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTCTGTCATGTGATTTT	43352601	True	NA	7	True	AATAAA	-18	NA	43358919	43494931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708_43396819_43397346_43397492_43397973_43398114_43399887_43400049_43401445_43401559_43403997_43404145_43405513_43405630_43405785_43405952_43407137_43407216_43407352_43407578_43414589_43414777_43443324_43443585_43444055_43444210_43448001_43448123_43450081_43450242_43451181_43451266_43490238_43490359_43492019_43492164_43493772
transcript_32105.known	chr11	+	3648	20	FSM	ENSG00000052841.15	ENST00000299240.10	3648	20	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_19	151.783524228247	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAAGTTCTCCTTCCTGCC	43352613	True	NA	NA	False	TATAAA	-16	NA	43358931	43446719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708_43396819_43397346_43397492_43397973_43398114_43399887_43400049_43401445_43401559_43403997_43404145_43405513_43405630_43405785_43405952_43407137_43407216_43407352_43407578_43414589_43414777_43436163_43436335_43443324_43443585_43444055_43444210_43445930
transcript_32117.nic	chr11	+	1466	10	ISM	ENSG00000052841.15	ENST00000299240.10	3648	20	-47	45097	-35	0	5prime_fragment	FALSE	canonical	3	742	junction_5	51.9360955857423	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTCCTCTTGATTCTT	43358872	True	NA	20	True	TATAAA	-32	NA	43358884	43401622	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708_43396819_43397346_43397492_43397973_43398114_43399887_43400049_43401445
transcript_32118.nic	chr11	+	1798	10	ISM	ENSG00000052841.15	ENST00000299240.10	3648	20	6	44712	6	385	5prime_fragment	FALSE	canonical	3	742	junction_5	51.9360955857423	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAATAAATAAA	43352619	True	NA	NA	False	AATAAA	-21	NA	43358937	43402007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708_43396819_43397346_43397492_43397973_43398114_43399887_43400049_43401445
transcript_32125.known	chr11	+	2257	15	FSM	ENSG00000166181.13	ENST00000455725.6	2257	15	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	464.027428156604	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCAGCATTCCTACCTAG	43293756	True	NA	NA	False	AATAAA	-14	NA	43311977	43342980	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_43312197_43318420_43318483_43318639_43318802_43320820_43320915_43321410_43321477_43321984_43322137_43323429_43323637_43326506_43326612_43327788_43327879_43328711_43328894_43329964_43330059_43330507_43330565_43335277_43335355_43335857_43335995_43342427
transcript_32134.known	chr11	+	3726	14	FSM	ENSG00000166181.13	ENST00000531273.6	3726	14	0	0	0	0	multi-exon	FALSE	canonical	3	649	junction_13	239.973445276493	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGTCTTGATGTGTT	43293774	True	NA	23	True	AATAAA	-18	NA	43311995	43344529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_43312197_43318639_43318802_43320820_43320915_43321410_43321477_43321984_43322137_43323429_43323637_43326506_43326612_43327788_43327879_43328711_43328894_43329964_43330059_43330507_43330565_43335277_43335355_43335857_43335995_43342427
transcript_32135.known	chr11	+	3714	14	FSM	ENSG00000166181.13	ENST00000378852.7	3714	14	0	0	0	0	multi-exon	FALSE	canonical	3	661	junction_13	237.266758718746	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGTCTTGATGTGTT	43293781	True	NA	23	True	AATAAA	-18	NA	43312002	43344529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_43312197_43318639_43318802_43320820_43320915_43321410_43321477_43321984_43322137_43323429_43323637_43326506_43326612_43327788_43327879_43328711_43328894_43329964_43330059_43330507_43330565_43335277_43335355_43335857_43335995_43342432
transcript_32140.known	chr11	+	1760	13	FSM	ENSG00000166181.13	ENST00000534600.5	1760	13	0	0	0	0	multi-exon	FALSE	canonical	3	1219	junction_9	132.236530505001	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCTTGTATTCAGAGGA	43293874	True	NA	NA	False	ATTAAA	-24	NA	43312095	43336230	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_43312197_43318639_43318802_43320820_43320915_43321410_43321477_43321984_43322137_43323429_43323637_43326506_43326612_43327788_43327879_43328711_43328894_43329964_43330059_43330507_43330565_43335277_43335355_43335857
transcript_32160.nnic	chr11	+	2117	12	NNC	ENSG00000149084.13	novel	2396	11	NA	NA	12	14	intron_retention	FALSE	non_canonical	0	0	junction_11	299.065652429044	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGCCTTAGCTTCTGGCT	43668748	True	NA	NA	False	ATTAAA	-12	NA	43680691	43856418	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_43680988_43750910_43750958_43754045_43754122_43798319_43798428_43815436_43815502_43816346_43816392_43830975_43831011_43838316_43838399_43839998_43840065_43854714_43854865_43855143_43855767_43855894
transcript_32161.nnic	chr11	+	2396	12	NNC	ENSG00000149084.13	novel	2396	11	NA	NA	-70	0	intron_retention	FALSE	non_canonical	0	0	junction_11	299.065652429044	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATTGTTTGCCCTTTTTT	43680576	True	NA	27	True	AATAAA	-43	NA	43680609	43856615	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_43680988_43750910_43750958_43754045_43754122_43798319_43798428_43815436_43815502_43816346_43816392_43830975_43831011_43838316_43838399_43839998_43840065_43854714_43854865_43855143_43855767_43855894
transcript_32163.nnic	chr11	+	2477	12	NNC	ENSG00000149084.13	novel	2396	11	NA	NA	-131	0	intron_retention	FALSE	non_canonical	0	0	junction_11	299.065652429044	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATTGTTTGCCCTTTTTT	NA	False	NA	27	True	AATAAA	-43	NA	43680548	43856615	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_43680988_43750910_43750958_43754045_43754122_43798319_43798428_43815436_43815502_43816346_43816392_43830975_43831011_43838316_43838399_43839998_43840065_43854714_43854865_43855143_43855787_43855894
transcript_32174.known	chr11	+	2396	11	FSM	ENSG00000149084.13	ENST00000278353.10	2396	11	0	0	0	0	multi-exon	FALSE	canonical	3	942	junction_3	39.7830365859621	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATTGTTTGCCCTTTTTT	43668794	True	NA	27	True	AATAAA	-43	NA	43680737	43856615	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_43680988_43750910_43750958_43754045_43754122_43798319_43798428_43815436_43815502_43816346_43816392_43830975_43831011_43838316_43838399_43839998_43840065_43854714_43854865_43855143
transcript_32180.known	chr11	+	866	10	FSM	ENSG00000149084.13	ENST00000637401.1	866	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	327.46535016022	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGATAACTGCATTGTAAC	43668851	True	NA	NA	False	AAGAAA	-18	NA	43680794	43855250	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_43680988_43750910_43750958_43754045_43754122_43815436_43815502_43816346_43816392_43830975_43831011_43838316_43838399_43839998_43840065_43854714_43854865_43855143
transcript_32196.known	chr11	+	1544	10	FSM	ENSG00000166199.13	ENST00000302708.9	1544	10	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_2	12.3867711194416	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTTGTTCTAAGCAGTT	43880001	True	NA	11	True	ATTAAA	-24	NA	43880830	43920274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_43881180_43882582_43882732_43883084_43883189_43883982_43884018_43886605_43886654_43889724_43889829_43892040_43892130_43901515_43901726_43919037_43919137_43919917
transcript_322.known	chr1	-	1317	1	FSM	ENSG00000225880.5	ENST00000473798.1	1317	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCAAAGCTCACCTTTTA	-827084	True	NA	-12	True	AATAAA	-14	NA	827522	826205	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_826200_827500
transcript_32204.known	chr11	+	1242	1	FSM	ENSG00000187479.8	ENST00000617612.3	1242	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCAGTTTTCCAGGCTCTT	43942569	True	NA	6	True	AATAAA	-18	NA	43942636	43943878	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_43942600_43943900
transcript_32206.known	chr11	+	2383	15	FSM	ENSG00000110455.14	ENST00000263776.9	2383	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	5.57005477568054	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCGAGGAGAATGGAATGA	44066246	True	NA	4	True	AATAAA	-21	NA	44066269	44084237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_44066702_44067627_44067916_44071255_44071316_44073446_44073518_44074611_44074682_44075525_44075593_44077278_44077377_44077844_44077923_44078683_44078785_44079530_44079621_44081019_44081066_44081178_44081321_44083168_44083312_44083423_44083578_44083694
transcript_32216.known	chr11	+	2997	15	FSM	ENSG00000151348.16	ENST00000358681.8	2997	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	73.4775059290326	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACTGTGTCTTAAACACC	44090598	True	NA	16	True	ATTAAA	-20	NA	44095716	44244931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_44095853_44107682_44108249_44109193_44109284_44114184_44114302_44124788_44124985_44126815_44126956_44130044_44130139_44144246_44144340_44171673_44171743_44197828_44198019_44206792_44206960_44232352_44232497_44234114_44234244_44236292_44236376_44244148
transcript_32220.known	chr11	+	10037	14	FSM	ENSG00000151348.16	ENST00000533608.7	10037	14	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_2	27.9136453662566	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAGTATTATATGTGGAT	44090559	True	NA	NA	False	AATAAA	-19	NA	44095677	44251962	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_44095853_44107682_44108249_44109193_44109284_44114184_44114302_44124788_44124985_44126815_44126956_44130044_44130139_44171610_44171743_44197828_44198019_44206792_44206960_44232352_44232497_44234114_44234244_44236292_44236376_44244148
transcript_32223.known	chr11	+	5109	13	FSM	ENSG00000151348.16	ENST00000683870.1	5109	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	61.3736280679432	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGAAAAACAGCAACTTTA	44090605	True	NA	NA	False	TATAAA	-23	NA	44095723	44247174	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_44095853_44107682_44108249_44109193_44109284_44114184_44114302_44124788_44124985_44126815_44126956_44171610_44171743_44197828_44198019_44206792_44206960_44232352_44232497_44234114_44234244_44236292_44236376_44244148
transcript_32225.known	chr11	+	5015	12	FSM	ENSG00000151348.16	ENST00000682359.1	5015	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	64.0881366260429	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGAAAAACAGCAACTTTA	44090559	True	NA	NA	False	TATAAA	-23	NA	44095677	44247174	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_44095853_44107682_44108249_44109193_44109284_44114184_44114302_44124788_44124985_44171610_44171743_44197828_44198019_44206792_44206960_44232352_44232497_44234114_44234244_44236292_44236376_44244148
transcript_32226.known	chr11	+	4928	12	FSM	ENSG00000151348.16	ENST00000684533.1	4928	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	60.7827726789874	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGAAAAACAGCAACTTTA	44090544	True	NA	NA	False	TATAAA	-23	NA	44095662	44247174	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_44095853_44107682_44108249_44109193_44109284_44114184_44114302_44130044_44130139_44171610_44171743_44197828_44198019_44206792_44206960_44232352_44232497_44234114_44234244_44236292_44236376_44244148
transcript_32232.nnic	chr11	+	1670	11	NNC	ENSG00000085117.12	novel	2212	10	NA	NA	-25	-95	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	16.8392398878334	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGCCGGGCGCGGTGGCG	44564577	True	NA	NA	False	AATACA	-8	NA	44565575	44619614	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_44565737_44587474_44587557_44594642_44594726_44600157_44600231_44605057_44605183_44605354_44605430_44615055_44615171_44615271_44615374_44618161_44618366_44618639_44618724_44619048
transcript_32233.nnic	chr11	+	1852	11	NNC	ENSG00000085117.12	novel	2212	10	NA	NA	-32	80	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	16.8392398878334	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGGAGGGAAGGGCGTTA	44564570	True	NA	NA	False	NA	NA	NA	44565568	44619789	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_44565737_44587474_44587557_44594642_44594726_44600157_44600231_44605057_44605183_44605354_44605430_44615055_44615171_44615271_44615374_44618161_44618366_44618639_44618724_44619048
transcript_32234.nnic	chr11	+	2373	11	NNC	ENSG00000085117.12	novel	2212	10	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	16.8392398878334	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTAGTCTGGAATGGTAGG	44564618	True	NA	5	True	ATTAAA	-15	NA	44565616	44620358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_44565737_44587474_44587557_44594642_44594726_44600157_44600231_44605057_44605183_44605354_44605430_44615055_44615171_44615271_44615374_44618161_44618366_44618639_44618724_44619048
transcript_32236.nnic	chr11	+	1738	10	NNC	ENSG00000085117.12	novel	2212	10	NA	NA	-2	80	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	21.2922057263065	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGGAGGGAAGGGCGTTA	44564600	True	NA	NA	False	NA	NA	NA	44565598	44619789	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_44565737_44587474_44587557_44594642_44594726_44600157_44600231_44605057_44605183_44605354_44605430_44615055_44615171_44615271_44615374_44618161_44618366_44619048
transcript_32238.known	chr11	+	2212	10	FSM	ENSG00000085117.12	ENST00000227155.9	2212	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	9.7080849594679	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTAGTCTGGAATGGTAGG	44564664	True	NA	5	True	ATTAAA	-15	NA	44565662	44620358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_44565737_44587474_44587557_44594642_44594726_44600157_44600231_44605057_44605183_44605354_44605430_44615271_44615374_44618161_44618366_44618639_44618724_44619048
transcript_32243.nic	chr11	+	1784	9	NIC	ENSG00000085117.12	novel	2212	10	NA	NA	-163	80	combination_of_known_junctions	FALSE	canonical	2	4	junction_8	17.5552698640608	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGGAGGGAAGGGCGTTA	44565423	False	NA	NA	False	NA	NA	NA	44565437	44619789	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_44565737_44587474_44587557_44594642_44594726_44600157_44600231_44605057_44605183_44605354_44605430_44615271_44615374_44618161_44618366_44619048
transcript_32246.nic	chr11	+	2865	7	ISM	ENSG00000085117.12	ENST00000227155.9	2212	10	-42	2776	20	-671	5prime_fragment	FALSE	canonical	3	24	junction_6	10.5672449894316	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGGAATTGACCCCGTCTC	44564622	True	NA	NA	False	NA	NA	NA	44565620	44617582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_44565737_44587474_44587557_44594642_44594726_44600157_44600231_44605057_44605183_44605354_44605430_44615271
transcript_32255.known	chr11	-	658	8	FSM	ENSG00000175274.19	ENST00000528473.5	658	8	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_7	83.6103694379532	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGATCCTGCTGCTCCT	-44950697	False	NA	NA	False	NA	NA	NA	44950752	44934979	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_44935018_44935560_44935663_44936802_44936900_44937303_44937353_44937554_44937614_44938206_44938367_44939113_44939191_44950676
transcript_32259.nic	chr11	-	3484	8	NIC	ENSG00000175274.19	novel	3683	8	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_7	75.5356382978341	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGCGTCCTGTTTTAT	-44947999	True	NA	-1	True	AAGAAA	-30	NA	44950907	44932347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_44935018_44935560_44935663_44936802_44936900_44937303_44937353_44937554_44937614_44938206_44938367_44939165_44939282_44950676
transcript_32260.known	chr11	-	3683	8	FSM	ENSG00000175274.19	ENST00000308212.9	3683	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	75.0406692455253	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGCGTCCTGTTTTAT	NA	False	NA	-1	True	AAGAAA	-30	NA	44951306	44932347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_44935018_44935560_44935663_44936802_44936900_44937303_44937353_44937554_44937614_44938206_44938367_44939165_44939282_44950876
transcript_32262.known	chr11	-	3381	8	FSM	ENSG00000175274.19	ENST00000395648.7	3381	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	87.1564392225795	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGCGTCCTGTTTTAT	-44950790	False	NA	-1	True	AAGAAA	-30	NA	44950845	44932347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_44935018_44935560_44935663_44936802_44936900_44937303_44937353_44937554_44937614_44938206_44938367_44941002_44941078_44950676
transcript_32265.known	chr11	-	3344	7	FSM	ENSG00000175274.19	ENST00000525680.6	3344	7	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_6	42.9146439652791	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGCGTCCTGTTTTAT	-44947975	True	NA	-1	True	AAGAAA	-30	NA	44950883	44932347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_44935018_44935560_44935663_44936802_44936900_44937303_44937353_44937554_44937614_44938206_44938367_44950676
transcript_32266.known	chr11	-	3567	7	FSM	ENSG00000175274.19	ENST00000616990.4	3567	7	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_6	56.7707377675037	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGCGTCCTGTTTTAT	NA	False	NA	-1	True	AAGAAA	-30	NA	44951306	44932347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_44935018_44935560_44935663_44936802_44936900_44937303_44937353_44937554_44937614_44938206_44938367_44950876
transcript_32278.nnic	chr11	+	3738	7	NNC	ENSG00000019485.14	novel	652	4	NA	NA	-2260	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_6	7.2953562094131	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAATCAATCTCACT	NA	False	NA	-16	True	NA	NA	NA	45180656	45214713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_45181168_45181760_45181886_45182245_45182350_45182860_45183124_45204710_45204779_45208873_45209296_45212468
transcript_32280.known	chr11	-	5165	6	FSM	ENSG00000019505.8	ENST00000020926.8	5165	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	3.84707681233427	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCTGCCTGGTGTTTTCT	-45284775	True	NA	-6	True	AATAAA	-16	NA	45286341	45240301	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_45244357_45246382_45246513_45252420_45252723_45254269_45254405_45255665_45255892_45286024
transcript_32284.known	chr11	+	993	3	FSM	ENSG00000254427.3	ENST00000669834.2	1006	3	13	0	3	0	multi-exon	FALSE	canonical	2	15	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTCAAAGCAAAAACCTGGG	45355383	True	NA	NA	False	NA	NA	NA	45355472	45357211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_45355603_45355878_45355926_45356395
transcript_32285.known	chr11	-	3906	4	FSM	ENSG00000175264.8	ENST00000308064.7	3906	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	2.16024689946929	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGCTCTGTAATTTTGCT	-45665496	True	NA	NA	False	ATTAAA	-24	NA	45665622	45647688	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_45650966_45651992_45652091_45652520_45652607_45665177
transcript_32289.nic	chr11	+	3140	3	NIC	ENSG00000181830.9	novel	3429	2	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	47	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTGTGTGGCCTGAG	45803994	True	NA	13	True	AATAAA	-13	NA	45804048	45813016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_45804421_45805809_45806337_45810775
transcript_32290.known	chr11	+	1756	3	FSM	ENSG00000181830.9	ENST00000442528.2	1756	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	46.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCTTCTCTATCCTCTC	45804017	True	NA	12	True	NA	NA	NA	45804071	45811558	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_45804518_45805809_45806337_45810775
transcript_32294.nnic	chr11	+	3862	3	NNC	ENSG00000181830.9	novel	3429	2	NA	NA	0	-2	intron_retention	FALSE	canonical	1	2	junction_1	0	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCCTGTGTGTGTGGCCTG	45804541	True	NA	11	True	AATAAA	-11	NA	45805148	45813014	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_45806337_45808135_45808571_45810775
transcript_32295.known	chr11	+	3429	2	FSM	ENSG00000181830.9	ENST00000314134.4	3429	2	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	0	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTGTGTGGCCTGAG	45804541	True	NA	13	True	AATAAA	-13	NA	45805148	45813016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_45806337_45810775
transcript_32297.nnic	chr11	+	4091	13	NNC	ENSG00000121671.12	novel	4203	12	NA	NA	24	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	18.2528536581727	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAAGTTTGTGCTGTCG	45846153	True	NA	11	True	TATAAA	-15	NA	45847429	45883241	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_45847706_45855981_45856091_45858730_45858874_45860847_45861033_45862059_45862149_45867611_45867753_45869505_45869818_45870052_45870205_45870329_45870533_45870841_45870935_45872091_45872234_45880913_45882064_45882145
transcript_32299.known	chr11	+	4131	12	FSM	ENSG00000121671.12	ENST00000616080.2	4131	12	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_7	7.24198046060161	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTTGTGCTGTCGTCA	45846198	True	NA	14	True	TATAAA	-18	NA	45847474	45883244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_45847706_45855981_45856091_45858730_45858874_45860847_45861033_45862059_45862149_45867611_45867753_45869505_45869818_45870052_45870205_45870329_45870533_45870841_45870935_45872091_45872234_45880913
transcript_3230.nnic	chr1	-	2800	16	NNC	ENSG00000142632.17	novel	3322	16	NA	NA	-84	-250	intron_retention	FALSE	canonical	3	10	junction_15	53.143579104159	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGAGTCTGTGATCCAT	-16212719	False	NA	-7	True	AATAAA	-17	NA	16212736	16198103	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_16198745_16199149_16199255_16201781_16201862_16202415_16202575_16204758_16204920_16205086_16205177_16205350_16205426_16205537_16205668_16205930_16206084_16206179_16206341_16206947_16207211_16207521_16207599_16207674_16207778_16207943_16208226_16208642_16208728_16212501
transcript_32303.nnic	chr11	+	3028	13	NNC	ENSG00000121653.11	novel	3050	12	NA	NA	-85	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	43.2000353652119	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACTGCAGTGGATGTATC	NA	False	NA	9	True	ATTAAA	-16	NA	45885565	45906461	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_45885922_45898084_45898191_45900137_45900453_45901979_45902062_45902371_45903185_45903364_45903441_45903988_45904162_45904454_45904565_45904717_45904835_45904970_45905042_45905150_45905250_45905648_45906300_45906402
transcript_32305.known	chr11	+	3050	12	FSM	ENSG00000121653.11	ENST00000241014.6	3050	12	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	18.2158771904672	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAGTGGATGTATCTGCA	45883840	True	NA	13	True	ATTAAA	-20	NA	45885650	45906465	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_45885922_45898084_45898191_45900137_45900453_45901979_45902062_45902371_45903185_45903364_45903441_45903988_45904162_45904454_45904565_45904717_45904835_45904970_45905042_45905150_45905250_45905648
transcript_32309.known	chr11	+	3180	12	FSM	ENSG00000121653.11	ENST00000395629.2	3180	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	44.4981195628321	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAGTGGATGTATCTGCA	NA	False	NA	13	True	ATTAAA	-20	NA	45896549	45906465	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_45896951_45898084_45898191_45900137_45900453_45901979_45902062_45902371_45903185_45903364_45903441_45903988_45904162_45904454_45904565_45904717_45904835_45904970_45905042_45905150_45905250_45905648
transcript_3231.nnic	chr1	-	2810	16	NNC	ENSG00000142632.17	novel	3322	16	NA	NA	-14	-250	intron_retention	FALSE	canonical	3	6	junction_15	53.9664916612357	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGAGTCTGTGATCCAT	-16209180	True	NA	-7	True	AATAAA	-17	NA	16212666	16198103	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_16198745_16199149_16199255_16201781_16201862_16202415_16202575_16204758_16204920_16205086_16205177_16205350_16205426_16205537_16205668_16205930_16206084_16206179_16206341_16206947_16207211_16207521_16207599_16207674_16207778_16207943_16208226_16208642_16208808_16212501
transcript_32314.nnic	chr11	+	2768	11	NIC	ENSG00000121653.11	novel	3050	12	NA	NA	-33	0	intron_retention	FALSE	canonical	1	2	junction_2	45.5548021617919	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAGTGGATGTATCTGCA	45883807	True	NA	13	True	ATTAAA	-20	NA	45885617	45906465	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_45885922_45898084_45898191_45901979_45902062_45902371_45903185_45903364_45903441_45903988_45904162_45904454_45904565_45904717_45904835_45904970_45905042_45905150_45905250_45905648
transcript_32319.known	chr11	-	1668	11	FSM	ENSG00000121680.16	ENST00000378750.10	1668	11	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_5	14.7	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACATCGGGCACTGGCCAG	-45916546	True	NA	-2	True	AGTAAA	-23	NA	45917877	45909662	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_45910313_45910897_45910963_45913818_45913939_45914130_45914204_45914315_45914469_45914603_45914685_45915467_45915569_45915702_45915837_45916226_45916304_45917457_45917494_45917699
transcript_3232.known	chr1	-	3322	16	FSM	ENSG00000142632.17	ENST00000270747.8	3322	16	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_15	35.4755627940637	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTCCTGTGGCTTCTA	-16209166	True	NA	0	True	ATTAAA	-21	NA	16212652	16197853	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_16198745_16199149_16199255_16201781_16201862_16202415_16202575_16204758_16204920_16205086_16205177_16205350_16205426_16205537_16205668_16205930_16206084_16206179_16206341_16206947_16207211_16207521_16207599_16207674_16207778_16207943_16208226_16208642_16209084_16212501
transcript_32321.known	chr11	-	1639	11	FSM	ENSG00000121680.16	ENST00000532681.5	1639	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_10	57.6919405116521	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCCCTAATAAAACTGACT	-45918342	True	NA	-35	True	NA	NA	NA	45918812	45910204	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_45910313_45910897_45910963_45913818_45913939_45914130_45914204_45914315_45914469_45914603_45914685_45915467_45915569_45915702_45915837_45916226_45916304_45917457_45917494_45918121
transcript_32322.known	chr11	-	1479	11	FSM	ENSG00000121680.16	ENST00000241041.7	1479	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	59.0763065873282	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAGGACATCGGGCACT	-45916498	True	NA	-8	True	AGTAAA	-17	NA	45917829	45909668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_45910178_45910897_45910963_45913818_45913939_45914130_45914204_45914315_45914469_45914603_45914685_45915467_45915569_45915702_45915837_45916226_45916304_45917457_45917494_45917699
transcript_32335.nic	chr11	-	2739	9	ISM	ENSG00000121680.16	ENST00000378750.10	1668	11	-966	3336	-31	846	5prime_fragment	FALSE	canonical	3	174	junction_3	14.7478812037526	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAATAATTAGCCAGACA	-45918833	False	NA	NA	False	NA	NA	NA	45918843	45912998	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_45913939_45914130_45914204_45914315_45914469_45914603_45914685_45915467_45915569_45915702_45915837_45916226_45916304_45917457_45917494_45917699
transcript_3236.nnic	chr1	-	2657	15	NIC	ENSG00000142632.17	novel	3322	16	NA	NA	-26	-250	intron_retention	FALSE	canonical	2	7	junction_14	55.208694967369	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGAGTCTGTGATCCAT	-16209192	True	NA	-7	True	AATAAA	-17	NA	16212678	16198103	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_16198745_16199149_16199255_16201781_16201862_16202415_16202575_16204758_16204920_16205086_16205177_16205350_16205426_16205537_16205668_16205930_16206084_16206179_16206341_16206947_16207211_16207521_16207599_16207674_16207778_16207943_16208226_16212501
transcript_32367.nic	chr11	+	2753	15	NIC	ENSG00000165905.18	novel	2552	14	NA	NA	-294	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_5	218.984903030099	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTGTTCCTGGTTTG	45922329	False	NA	36	True	ATTAAA	-14	NA	45922361	45929096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_45922729_45922820_45922965_45923057_45923168_45923472_45923556_45924153_45924278_45924505_45924678_45924784_45924890_45926038_45926152_45926221_45926348_45926441_45926598_45926710_45926872_45927314_45927594_45927919_45928070_45928176_45928373_45928629
transcript_32409.known	chr11	+	2552	14	FSM	ENSG00000165905.18	ENST00000401752.6	2552	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	205.023508538056	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTGTTCCTGGTTTG	45915952	True	NA	36	True	ATTAAA	-14	NA	45922655	45929096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_45922729_45922820_45923168_45923472_45923556_45924153_45924278_45924505_45924678_45924784_45924890_45926038_45926152_45926221_45926348_45926441_45926598_45926710_45926872_45927314_45927594_45927919_45928070_45928176_45928373_45928629
transcript_3244.known	chr1	-	1574	5	FSM	ENSG00000132881.12	ENST00000375599.8	1574	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	1.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAGAGACGTGTTCGTTC	-16236933	True	NA	NA	False	GATAAA	-22	NA	16237183	16231691	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_16232298_16232509_16232647_16232892_16233018_16233611_16233765_16236630
transcript_3245.known	chr1	-	336	4	FSM	ENSG00000132881.12	ENST00000434014.1	336	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	2.16024689946929	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGGACGTGCCCGAGCGG	-16236409	False	NA	NA	False	NA	NA	NA	16236659	16232280	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_16232298_16232509_16232647_16233611_16233765_16236630
transcript_3246.known	chr1	-	6227	10	FSM	ENSG00000037637.11	ENST00000375592.8	6227	10	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_3	17.2240142436851	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTTTTATTAGCAAAAAAA	-16349851	True	NA	0	True	AATAAA	-18	NA	16352480	16246839	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_16251786_16252287_16252405_16253095_16253153_16253634_16253732_16255710_16255822_16256605_16256760_16294782_16294918_16305802_16305920_16315168_16315436_16352254
transcript_3249.known	chr1	+	583	5	FSM	ENSG00000055070.17	ENST00000475554.5	583	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	312.385479015911	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCACCGCCTCCTGGGTCG	16353652	True	NA	NA	False	GATAAA	-32	NA	16367242	16395172	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_16367309_16390549_16390627_16391374_16391425_16393227_16393483_16395037
transcript_325.known	chr1	+	443	2	FSM	ENSG00000241180.1	ENST00000398216.2	443	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAGAAAAAAAGAAAGG	914061	False	NA	NA	False	AGTAAA	-34	NA	914170	914971	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_914445_914802
transcript_3250.known	chr1	+	3480	4	FSM	ENSG00000055070.17	ENST00000401088.9	3480	4	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_2	284.465580811926	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTTGTCCTCATTTCAG	16353651	True	NA	20	True	TATAAA	-33	NA	16367241	16398145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_16367309_16391374_16391425_16393227_16393483_16395037
transcript_3252.known	chr1	+	892	4	FSM	ENSG00000055070.17	ENST00000471507.5	892	4	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	294.462599021034	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGGGGGGACCCAGCAAG	16367057	False	NA	NA	False	NA	NA	NA	16367087	16395406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_16367309_16391374_16391425_16393230_16393483_16395037
transcript_32523.known	chr11	+	2522	13	FSM	ENSG00000165905.18	ENST00000325468.9	2522	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	200.321755073071	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTGTTCCTGGTTTG	45916074	False	NA	36	True	ATTAAA	-14	NA	45922777	45929096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_45923168_45923472_45923556_45924153_45924278_45924505_45924678_45924784_45924890_45926038_45926152_45926221_45926348_45926441_45926598_45926710_45926872_45927314_45927594_45927919_45928070_45928176_45928373_45928629
transcript_32532.known	chr11	-	7451	19	FSM	ENSG00000135365.17	ENST00000676320.1	7451	19	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_16	13.3800108878141	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCATGGTGTTGGGTTTG	-46119992	True	NA	NA	False	AATAAA	-19	NA	46121454	45929318	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_45934226_45935635_45935740_45936493_45936570_45938156_45938313_45945839_45946004_45948885_45948947_45949401_45949482_45950205_45950258_45953526_45953626_45965314_45965609_45969814_45969905_45971115_45971368_45979759_45979967_46076753_46076820_46079133_46079167_46084165_46084303_46090454_46090567_46092182_46092224_46120934
transcript_32533.known	chr11	-	2730	18	FSM	ENSG00000135365.17	ENST00000418153.6	2730	18	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_11	14.5166650444873	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGGAATTGAGATTTCA	-46120983	False	NA	NA	False	TATAAA	-6	NA	46121010	45933480	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_45934226_45935635_45935740_45936493_45936570_45938156_45938313_45945839_45946004_45948885_45948947_45949401_45949482_45950205_45950258_45953526_45953626_45965314_45965609_45969814_45969902_45971115_45971368_45979759_45979967_46076753_46076820_46079133_46079167_46084165_46084303_46092182_46092224_46120934
transcript_32536.known	chr11	+	2673	12	FSM	ENSG00000157613.11	ENST00000621158.5	2673	12	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	12.1526108476007	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCAGCATCAACTCCTGA	46276736	True	NA	NA	False	AAGAAA	-26	NA	46277661	46321409	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46278214_46299934_46300164_46307815_46308001_46309988_46310068_46311031_46311190_46312324_46312475_46312611_46312671_46312850_46312920_46316285_46316386_46317360_46317488_46320263_46320529_46320709
transcript_32539.nnic	chr11	+	2208	12	NNC	ENSG00000157613.11	novel	1817	4	NA	NA	-400	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.9897343706531	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCAGCATCAACTCCTGA	46294535	True	NA	NA	False	AAGAAA	-26	NA	46294725	46321409	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_46294813_46299934_46300164_46307815_46308001_46309988_46310068_46311031_46311190_46312324_46312475_46312611_46312671_46312850_46312920_46316285_46316386_46317360_46317488_46320263_46320529_46320709
transcript_32545.known	chr11	+	3816	31	FSM	ENSG00000149091.15	ENST00000343674.10	3816	31	0	0	0	0	multi-exon	TRUE	canonical	3	51	junction_1	129.102822931526	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTCTTCTTTTGCG	46332785	True	NA	19	True	AGTAAA	-19	NA	46332904	46380554	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46333488_46367290_46367400_46367651_46367748_46368004_46368080_46369493_46369551_46369940_46370010_46371312_46371385_46371486_46371604_46371703_46371776_46372074_46372171_46372427_46372511_46372616_46372678_46372770_46372885_46372960_46373102_46374156_46374236_46374398_46374455_46374603_46374667_46374765_46374840_46374933_46375046_46375431_46375632_46375850_46375952_46376065_46376146_46376327_46376398_46376523_46376565_46377072_46377213_46378197_46378230_46378456_46378501_46378990_46379112_46379202_46379237_46379468_46379569_46379830
transcript_32551.known	chr11	+	2862	31	FSM	ENSG00000149091.15	ENST00000421244.6	2862	31	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_3	67.4583739962817	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCCGCCCACGGGCAGCA	46347565	True	NA	NA	False	NA	NA	NA	46347587	46379947	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46347821_46367290_46367400_46367651_46367748_46368001_46368080_46369493_46369551_46369940_46370010_46371312_46371385_46371486_46371604_46371703_46371776_46372074_46372171_46372427_46372511_46372616_46372678_46372770_46372885_46372960_46373102_46374156_46374236_46374398_46374455_46374603_46374667_46374765_46374840_46374933_46375046_46375431_46375632_46375850_46375952_46376065_46376146_46376327_46376398_46376523_46376565_46377072_46377213_46378197_46378230_46378456_46378501_46378990_46379112_46379202_46379237_46379468_46379569_46379830
transcript_3256.known	chr1	+	3401	3	FSM	ENSG00000055070.17	ENST00000492354.1	3401	3	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	247.5	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATCTTTGTCCTCATTT	16353674	True	NA	17	True	TATAAA	-30	NA	16367264	16398142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_16367309_16393230_16393483_16395037
transcript_32565.nic	chr11	+	969	8	ISM	ENSG00000149091.15	ENST00000421244.6	2862	31	-138	8344	-13	219	5prime_fragment	FALSE	canonical	3	387	junction_3	81.8687351552372	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTACTGCCTGCACCCT	46343932	True	NA	NA	False	NA	NA	NA	46347449	46371603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_46347821_46367290_46367400_46367651_46367748_46368001_46368080_46369493_46369551_46369940_46370010_46371312_46371385_46371486
transcript_32572.known	chr11	+	1785	3	FSM	ENSG00000149091.15	ENST00000527674.5	1785	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	269	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAACAAAAAAA	46344488	True	NA	NA	False	NA	NA	NA	46345433	46369175	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46345586_46367290_46367400_46367651
transcript_32578.known	chr11	+	1166	5	FSM	ENSG00000110492.17	ENST00000405308.6	1166	5	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_1	3740.20871743811	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAAGCTCTTCTTTTTT	46380743	False	NA	-12	True	AATAAA	-17	NA	46380755	46383799	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46381184_46382056_46382134_46382293_46382462_46382586_46382749_46383468
transcript_32579.known	chr11	+	985	5	FSM	ENSG00000110492.17	ENST00000359803.7	985	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3839.67088433371	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGCCCCTTCCCAAGGA	46380310	True	NA	14	True	AATAAA	-43	NA	46381067	46383825	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46381289_46382056_46382134_46382293_46382462_46382586_46382749_46383468
transcript_3258.known	chr1	+	3447	3	FSM	ENSG00000055070.17	ENST00000401089.3	3447	3	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_1	261.5	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTTGTCCTCATTTCAG	16353634	True	NA	20	True	TATAAA	-33	NA	16367224	16398145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_16367309_16393227_16393483_16395037
transcript_32581.known	chr11	+	830	5	FSM	ENSG00000110492.17	ENST00000395566.9	830	5	0	0	0	0	multi-exon	FALSE	canonical	3	5885	junction_1	1301.04465238515	1551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGCTCTTCTTTTTTAA	46297178	True	NA	-10	True	AATAAA	-19	NA	46381668	46383801	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46381759_46382056_46382134_46382293_46382462_46382586_46382749_46383468
transcript_32585.known	chr11	+	951	5	FSM	ENSG00000110492.17	ENST00000395565.5	951	5	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_1	3745.83030682117	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGGAGTTTGCTGTGGA	46297220	True	NA	26	True	AATAAA	-33	NA	46381710	46383837	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46381886_46382056_46382134_46382293_46382462_46382586_46382749_46383468
transcript_32588.known	chr11	+	603	4	FSM	ENSG00000110492.17	ENST00000490240.5	603	4	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_1	3992.71856703619	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCAAGTTAAACCTTAAGT	46380303	True	NA	NA	False	GGGGCT	-33	NA	46381060	46382821	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46381184_46382056_46382134_46382293_46382462_46382586
transcript_32591.known	chr11	+	498	4	FSM	ENSG00000110492.17	ENST00000533283.5	498	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	4224.06639257587	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGACCCACCAGTGCCTT	46297202	True	NA	NA	False	NA	NA	NA	46381692	46383570	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46381759_46382293_46382462_46382586_46382749_46383468
transcript_32592.known	chr11	-	3044	2	FSM	ENSG00000180720.8	ENST00000682254.1	3044	2	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTTTATTTGATGTGTT	-46391726	True	NA	NA	False	ATTAAA	-29	NA	46391776	46383788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_46386587_46391530
transcript_32593.known	chr11	+	1026	4	FSM	ENSG00000110492.17	ENST00000407067.1	1026	4	0	0	0	0	multi-exon	FALSE	canonical	3	8656	junction_1	224.156195542305	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTTTTTCCCCCCAATA	46297262	True	NA	-28	True	AATAAA	-1	NA	46381752	46383783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46382134_46382293_46382462_46382586_46382749_46383468
transcript_32596.nic	chr11	-	5043	19	NIC	ENSG00000110497.15	novel	5023	19	NA	NA	37	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_10	18.0968757961215	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCAGGCTCCTCTCTCTTA	-46590064	False	NA	-4	True	ATTAAA	-17	NA	46594088	46396414	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_46397944_46408512_46408707_46410275_46410369_46417912_46418053_46433473_46433629_46434848_46435038_46443487_46443599_46493607_46493709_46494123_46494205_46508190_46508371_46512726_46512814_46541944_46542982_46543251_46543399_46543974_46544042_46545603_46545777_46547112_46547297_46547816_46547876_46548245_46548501_46593827
transcript_32597.known	chr11	-	5249	18	FSM	ENSG00000110497.15	ENST00000683756.1	5249	18	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_10	18.1853205182901	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGCTCCTCTCTCTTAT	-46589999	True	NA	-3	True	ATTAAA	-18	NA	46594023	46396413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_46397944_46408512_46408707_46410275_46410369_46417912_46418053_46433473_46433629_46434848_46435038_46443487_46443599_46493607_46493709_46494123_46494205_46508190_46508371_46512726_46512814_46541944_46543399_46543974_46544042_46545603_46545777_46547112_46547297_46547816_46547876_46548245_46548501_46593827
transcript_32599.known	chr11	-	4817	18	FSM	ENSG00000110497.15	ENST00000533727.5	4817	18	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_10	15.4505573745218	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGCTCCTCTCTCTTAT	-46589924	True	NA	-3	True	ATTAAA	-18	NA	46593948	46396413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_46397944_46408512_46408707_46410275_46410369_46417912_46418053_46433473_46433629_46434848_46435038_46443487_46443599_46493607_46493709_46494123_46494205_46508190_46508371_46541944_46542982_46543251_46543399_46543974_46544042_46545603_46545777_46547112_46547297_46547816_46547876_46548245_46548501_46593827
transcript_32602.known	chr11	-	5067	17	FSM	ENSG00000110497.15	ENST00000534300.5	5067	17	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	21.1094617411245	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGCTCCTCTCTCTTAT	-46589997	True	NA	-3	True	ATTAAA	-18	NA	46594021	46396413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_46397944_46408512_46408707_46410275_46410369_46417912_46418053_46433473_46433629_46434848_46435038_46443487_46443599_46493607_46493709_46494123_46494205_46512726_46512814_46541944_46543399_46543974_46544042_46545603_46545777_46547112_46547297_46547816_46547876_46548245_46548501_46593827
transcript_32611.known	chr11	-	498	1	FSM	ENSG00000244313.3	ENST00000467930.1	498	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGAGAGGATTCTTTTG	-46429127	True	NA	-60	True	NA	NA	NA	46429150	46428652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_46428700_46429200
transcript_3264.known	chr1	+	981	9	FSM	ENSG00000157191.20	ENST00000459640.5	981	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	198.002170126996	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGAAGCCCTCCTCAGCT	16433621	True	NA	NA	False	NA	NA	NA	16440755	16458956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_16440854_16443631_16443733_16447869_16447975_16448059_16448142_16449092_16449202_16450124_16450242_16451837_16452016_16455817_16455894_16458841
transcript_32647.nic	chr11	+	2959	18	NIC	ENSG00000175224.17	novel	4199	18	NA	NA	-258	0	combination_of_known_junctions	TRUE	canonical	3	70	junction_2	102.186612656592	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTTTGTCACTTGGAGT	46617036	True	NA	18	True	AATAAA	-20	NA	46617268	46673041	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_46617891_46618259_46618376_46630044_46630101_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_32648.nic	chr11	+	4436	18	NIC	ENSG00000175224.17	novel	4246	19	NA	NA	-258	0	intron_retention	FALSE	canonical	3	70	junction_2	102.186612656592	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTCCTGTCCTGTAGGT	46617036	True	NA	12	True	AATAAA	-18	NA	46617268	46674518	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_46617891_46618259_46618376_46630044_46630101_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_32663.known	chr11	+	4014	17	FSM	ENSG00000175224.17	ENST00000524625.5	4014	17	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	63.7075532707857	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCTGTCCTGTAGGTTG	46613995	True	NA	14	True	AATAAA	-20	NA	46617576	46674520	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46617891_46630044_46630101_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_32672.nic	chr11	+	2903	17	NIC	ENSG00000175224.17	novel	4199	18	NA	NA	-258	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	109.179593302732	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTTTGTCACTTGGAGT	46617036	True	NA	18	True	AATAAA	-20	NA	46617268	46673041	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_46617891_46618259_46618376_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_32676.known	chr11	+	2566	17	FSM	ENSG00000175224.17	ENST00000529655.5	2566	17	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	123.895857855499	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTTTGTCACTTGGAGT	46613959	True	NA	18	True	AATAAA	-20	NA	46617540	46673041	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46617891_46618324_46618376_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_32692.nic	chr11	+	2780	16	NIC	ENSG00000175224.17	novel	2566	17	NA	NA	-251	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_1	82.1141211296138	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTTTGTCACTTGGAGT	46617043	True	NA	18	True	AATAAA	-20	NA	46617275	46673041	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_46617891_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_32693.nic	chr11	+	4257	16	NIC	ENSG00000175224.17	novel	4246	19	NA	NA	-251	0	intron_retention	FALSE	canonical	3	79	junction_1	82.1141211296138	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTCCTGTCCTGTAGGT	46617043	True	NA	12	True	AATAAA	-18	NA	46617275	46674518	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_46617891_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_32708.known	chr11	-	1967	3	FSM	ENSG00000180423.4	ENST00000326737.3	1967	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	14	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-46616812	True	NA	NA	False	NA	NA	NA	46617227	46602860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_46603910_46615567_46616382_46617123
transcript_32711.known	chr11	+	4246	19	FSM	ENSG00000175224.17	ENST00000683050.1	4246	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	149.372101449227	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTCCTGTCCTGTAGGT	46613971	True	NA	12	True	AATAAA	-18	NA	46617552	46674518	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46617891_46630044_46630101_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46663996_46664096_46664848_46664960_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_32713.known	chr11	-	3395	13	FSM	ENSG00000175220.12	ENST00000311956.9	3395	13	0	0	0	0	multi-exon	TRUE	canonical	3	315	junction_6	20.1225412576709	554	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTCATCTGGATGTTGGG	-46693144	True	NA	-12	True	AATAAA	-16	NA	46700619	46677079	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_46679226_46679364_46679469_46679647_46679777_46680204_46680283_46680486_46680564_46680639_46680748_46681010_46681110_46681292_46681380_46682050_46682183_46688172_46688261_46695659_46695756_46695974_46696157_46700550
transcript_32730.known	chr11	+	2229	5	FSM	ENSG00000175213.3	ENST00000311764.3	2229	5	0	0	0	0	multi-exon	TRUE	canonical	3	90	junction_2	3.64005494464026	310	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCGTGTCTGCATCTT	46699788	True	NA	13	True	CATAAA	-17	NA	46701030	46705912	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46701100_46701398_46701677_46702703_46702766_46702983_46703244_46704352
transcript_32737.known	chr11	-	7172	44	FSM	ENSG00000175216.15	ENST00000529230.6	7172	44	0	0	0	0	multi-exon	TRUE	canonical	3	824	junction_28	82.2100226934657	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAGAAAGTGAGCTGAGTA	-46836457	True	NA	NA	False	NA	NA	NA	46846280	46743047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_46744266_46744425_46744578_46750273_46750434_46750527_46750612_46751117_46751256_46751345_46751535_46752634_46752711_46753309_46753498_46754887_46755068_46758922_46759044_46759268_46759443_46760611_46760785_46761999_46762194_46762626_46762763_46762975_46763180_46763480_46763631_46765130_46765257_46767574_46767664_46769962_46770099_46770787_46770983_46776254_46776384_46777438_46777553_46778138_46778314_46778459_46778600_46780193_46780320_46780427_46780486_46783273_46783369_46784487_46784674_46788680_46788774_46790075_46790187_46790469_46790584_46795593_46795777_46796811_46796941_46797804_46797970_46798082_46798173_46801199_46801305_46808030_46808145_46809399_46809501_46809741_46809875_46811006_46811179_46816197_46816405_46818309_46818504_46821174_46821269_46846219
transcript_32738.known	chr11	-	6532	43	FSM	ENSG00000175216.15	ENST00000312055.9	6532	43	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	167.848012247448	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCCAAGATGCTCCATAT	-46836485	True	NA	-9	True	AATAAA	-21	NA	46846308	46743535	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_46744266_46744425_46744578_46750273_46750434_46750527_46750612_46751117_46751256_46751345_46751535_46752634_46752711_46753309_46753498_46758922_46759044_46759268_46759443_46760611_46760785_46761999_46762194_46762626_46762763_46762975_46763180_46763480_46763631_46765130_46765257_46767574_46767664_46769962_46770099_46770787_46770983_46776254_46776384_46777438_46777553_46778138_46778314_46778459_46778600_46780193_46780320_46780427_46780486_46783273_46783369_46784487_46784674_46788680_46788774_46790075_46790187_46790469_46790584_46795593_46795777_46796811_46796941_46797804_46797970_46798082_46798173_46801199_46801305_46808030_46808145_46809399_46809501_46809741_46809875_46811006_46811179_46816197_46816405_46818309_46818504_46821174_46821269_46846219
transcript_3274.known	chr1	+	2018	8	FSM	ENSG00000157191.20	ENST00000337132.10	2018	8	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_5	47.5660657637869	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTATGTGAAAGATGAATG	16433589	True	NA	11	True	AATAAA	-18	NA	16440723	16460078	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_16440854_16443631_16443733_16447869_16447975_16448059_16448142_16449092_16449202_16451837_16452016_16455817_16455894_16458841
transcript_32744.nic	chr11	-	948	7	NIC	ENSG00000175216.15	novel	6532	43	NA	NA	-5	6804	combination_of_known_junctions	FALSE	canonical	3	56	junction_6	332.761509526301	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTAATAGTTAAACTTCT	-46836462	True	NA	0	True	NA	NA	NA	46846285	46809398	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_46809501_46809741_46809875_46811006_46811179_46816197_46816405_46818309_46818504_46821174_46821249_46846219
transcript_32748.known	chr11	-	8155	38	FSM	ENSG00000134569.10	ENST00000378623.6	8155	38	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_22	17.8406631669119	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCAGCTCATCTGGAGA	-46916978	True	NA	NA	False	AATAAA	-22	NA	46918550	46856716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_46859316_46862605_46862748_46864447_46864536_46865118_46865187_46867978_46868115_46868599_46868714_46868987_46869133_46871524_46871634_46873099_46873235_46873374_46873594_46874799_46875104_46875455_46875682_46875803_46875967_46876465_46876638_46876743_46876831_46877198_46877340_46878906_46879039_46879125_46879316_46881701_46881904_46883870_46883977_46886090_46886173_46886324_46886534_46889410_46889534_46889943_46890121_46890276_46890495_46892972_46893130_46894588_46894820_46895165_46895292_46895883_46896019_46896209_46896336_46896868_46896995_46898557_46898678_46898903_46899033_46899386_46899504_46899862_46899977_46900261_46900379_46902782_46902930_46918327
transcript_32752.known	chr11	+	1651	9	FSM	ENSG00000149179.14	ENST00000378615.7	1651	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_8	77.1050419881865	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGAGTCTAAAGCTCCT	46933786	True	NA	24	True	AATAAA	-21	NA	46936777	47162247	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46936852_46987207_46987311_47052387_47052519_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126_47161191_47161445
transcript_32754.known	chr11	+	1166	9	FSM	ENSG00000149179.14	ENST00000378618.6	1166	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	86.9511357027612	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAAGTCCCTCTGGGGGAG	46933762	True	NA	NA	False	AATACA	-18	NA	46936753	47164385	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46936852_46987207_46987311_47052387_47052519_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126_47161191_47164092
transcript_32758.known	chr11	+	1916	8	FSM	ENSG00000149179.14	ENST00000395460.6	1916	8	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_7	10.7760126660835	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGAGTCTAAAGCTCCT	46933776	True	NA	24	True	AATAAA	-21	NA	46936767	47162247	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46936852_46987207_46987311_47052387_47052519_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126
transcript_3276.known	chr1	+	1929	7	FSM	ENSG00000157191.20	ENST00000443980.6	1929	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	168.360146379388	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGTATGTGAAAGATGAAT	16433601	True	NA	10	True	AATAAA	-17	NA	16440735	16460077	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_16440854_16443631_16443733_16447869_16447975_16448059_16448142_16449092_16449202_16451837_16452016_16458841
transcript_32760.known	chr11	+	1069	8	FSM	ENSG00000149179.14	ENST00000527784.5	1069	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	91.5991711931135	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGAATGGCCTGCTCTCC	46933788	True	NA	NA	False	GGGGCT	-31	NA	46936779	47161816	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46936852_46987207_46987311_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126_47161191_47161463
transcript_32761.known	chr11	+	1527	8	FSM	ENSG00000149179.14	ENST00000525895.5	1527	8	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	77.6722575430683	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGTGAGTCTAAAGCTC	46933787	True	NA	22	True	AATAAA	-19	NA	46936778	47162245	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46936852_47052387_47052519_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126_47161191_47161463
transcript_32767.known	chr11	+	719	4	FSM	ENSG00000149179.14	ENST00000532840.5	719	4	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_2	4.89897948556636	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGAGAAAAGAGGGGCTG	46933768	True	NA	NA	False	NA	NA	NA	46936759	47138037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46936852_46987207_46987311_47052387_47052519_47137644
transcript_32769.known	chr11	+	825	3	FSM	ENSG00000149179.14	ENST00000522712.6	825	3	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_2	6	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTGAATATGAAGAAAGAAA	46933753	True	NA	NA	False	ATTAAA	-28	NA	46936744	47053002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_46936852_46987207_46987311_47052387
transcript_32770.known	chr11	-	2773	16	FSM	ENSG00000149182.15	ENST00000524782.6	2773	16	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_10	38.8286263241725	937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTCCTCTGGATCCTG	-47169047	True	NA	-4	True	AATAAA	-39	NA	47176879	47164300	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_47165503_47166267_47166387_47166505_47166600_47166759_47166887_47167908_47168044_47168122_47168252_47171425_47171558_47171663_47171801_47172280_47172334_47173425_47173483_47173758_47173841_47175014_47175099_47175181_47175314_47175850_47175924_47176515_47176635_47176781
transcript_32771.known	chr11	-	1723	3	FSM	ENSG00000149182.15	ENST00000526185.5	1723	3	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_1	11	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-47169036	True	NA	NA	False	NA	NA	NA	47176868	47174406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_47175924_47176515_47176635_47176781
transcript_32773.nnic	chr11	-	2077	11	NIC	ENSG00000165912.16	novel	1873	11	NA	NA	-132	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	180.7224391159	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGGGCTCATGTGCATT	-47185492	False	4130	-10	True	ATTAAA	-38	NA	47185551	47177521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_47178047_47178365_47178488_47178893_47179031_47179154_47179280_47179410_47179587_47180185_47180342_47180454_47180691_47182402_47182560_47182673_47182765_47183003_47183070_47185265
transcript_32775.known	chr11	-	1845	11	FSM	ENSG00000165912.16	ENST00000532457.5	1845	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	138.022606843951	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGACACACACCCACACACA	-47182310	True	NA	-45	True	ATTAAA	-3	NA	47186440	47177556	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_47178047_47178365_47178488_47178893_47179028_47179154_47179280_47179410_47179587_47180185_47180342_47180454_47180691_47182402_47182560_47182673_47182765_47183003_47183070_47186348
transcript_32781.nnic	chr11	-	2031	11	NIC	ENSG00000165912.16	novel	1873	11	NA	NA	-100	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	179.769185346099	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGGGCTCATGTGCATT	-47186484	False	NA	-10	True	ATTAAA	-38	NA	47186543	47177521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_47178047_47178365_47178488_47178893_47179031_47179154_47179280_47179410_47179587_47180185_47180342_47180454_47180691_47182402_47182560_47182673_47182810_47183003_47183070_47186348
transcript_3280.known	chr1	+	572	2	FSM	ENSG00000157191.20	ENST00000486390.1	572	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCCTATGGCTATTTTG	16433601	True	NA	11	True	ATTAAA	-29	NA	16440735	16441619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_16440854_16441165
transcript_32806.known	chr11	-	1873	11	FSM	ENSG00000165912.16	ENST00000298838.11	1873	11	0	0	0	0	multi-exon	FALSE	canonical	2	299	junction_3	56.5707521604583	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGGGCTCATGTGCATT	-47182304	True	NA	-10	True	ATTAAA	-38	NA	47186434	47177521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_47178047_47178365_47178488_47178893_47179031_47179158_47179280_47179410_47179587_47180185_47180342_47180454_47180691_47182402_47182560_47182673_47182765_47183003_47183070_47186348
transcript_32807.nic	chr11	+	1978	11	NIC	ENSG00000134574.12	novel	1815	10	NA	NA	-51	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	145.015033703406	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCTGCGTGGATCTTCC	NA	False	NA	24	True	AATAAA	-14	NA	47214413	47239216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_47214675_47215070_47215264_47216335_47216473_47216857_47217050_47232813_47232960_47234572_47234673_47234756_47234935_47235269_47235413_47237836_47238002_47238137_47238184_47238799
transcript_32810.known	chr11	+	1815	10	FSM	ENSG00000134574.12	ENST00000256996.9	1815	10	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_6	83.0686165873033	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGCGTGGATCTTCCA	47210429	True	NA	25	True	AATAAA	-15	NA	47214973	47239217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_47215264_47216335_47216473_47216857_47217050_47232813_47232960_47234572_47234673_47234756_47234935_47235269_47235413_47237836_47238002_47238137_47238184_47238799
transcript_32813.known	chr11	+	1591	9	FSM	ENSG00000134574.12	ENST00000378601.7	1591	9	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_5	145.439796393559	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATGGCCAATAAAACCATA	47210447	True	NA	-3	True	NA	NA	NA	47214991	47239189	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_47215264_47216335_47216473_47216857_47217050_47232813_47232960_47234572_47234673_47235269_47235413_47237836_47238002_47238137_47238184_47238799
transcript_32817.known	chr11	+	717	6	FSM	ENSG00000134574.12	ENST00000378600.7	717	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	196.569580556097	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACACTAAAGAAGGTGTG	47210592	False	NA	NA	False	NA	NA	NA	47215136	47238849	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_47215264_47216335_47216473_47216857_47217050_47237836_47238002_47238137_47238184_47238799
transcript_32820.known	chr11	+	897	3	FSM	ENSG00000134574.12	ENST00000615695.1	897	3	0	0	0	0	multi-exon	FALSE	canonical	3	380	junction_2	8.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGGAGTGTTTGTTGA	47210513	True	NA	NA	False	AATAAA	-10	NA	47215057	47217411	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_47215264_47216335_47216473_47216857
transcript_32823.known	chr11	-	2200	11	FSM	ENSG00000134575.13	ENST00000256997.9	2200	11	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_5	11.5585466214399	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTGCTGTTTCCTGTGCT	-47247131	False	NA	-4	True	AATGAA	-24	NA	47248906	47239304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_47240250_47242722_47242899_47243017_47243125_47243238_47243322_47244734_47244868_47245304_47245395_47245473_47245573_47245681_47245835_47247640_47247728_47248037_47248134_47248675
transcript_32825.nnic	chr11	-	2019	11	NNC	ENSG00000134575.13	novel	2111	11	NA	NA	-2	1	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_1	24.8565886637728	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGCTGTTTCCTGTGCTT	-47247032	True	NA	-3	True	AATGAA	-25	NA	47248807	47239303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_47240167_47242722_47242899_47243017_47243125_47243238_47243322_47244734_47244868_47245304_47245395_47245473_47245573_47245681_47245835_47247640_47247728_47248037_47248134_47248675
transcript_32826.nnic	chr11	-	2080	11	NNC	ENSG00000134575.13	novel	2200	11	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	25.124490044576	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGCTGTTTCCTGTGCTT	-47247061	True	NA	-3	True	AATGAA	-25	NA	47248836	47239303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_47240199_47242722_47242899_47243017_47243125_47243238_47243322_47244734_47244868_47245304_47245395_47245473_47245573_47245681_47245835_47247640_47247728_47248037_47248134_47248675
transcript_32834.known	chr11	+	1852	10	FSM	ENSG00000025434.19	ENST00000441012.7	1852	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	29.0516780926679	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTGGTATGGCCATAAA	47257602	True	NA	2	True	AAGAAA	-16	NA	47257995	47269033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_47258130_47259179_47259260_47259790_47259980_47260408_47260676_47261240_47261450_47261546_47261727_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_32836.known	chr11	-	2170	10	FSM	ENSG00000134575.13	ENST00000673184.1	2170	10	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_5	11.9329401962968	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATCGTTGTCACCCCTTC	-47247041	True	NA	NA	False	NA	NA	NA	47248816	47239554	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_47240250_47242722_47242899_47243017_47243125_47243238_47243322_47244734_47244868_47245304_47245395_47245473_47245573_47245681_47245835_47247640_47248134_47248675
transcript_32842.known	chr11	+	1501	9	FSM	ENSG00000025434.19	ENST00000395397.7	1501	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	27.3104261226368	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCCCGTGGCATTAAAAG	47247914	True	NA	-24	True	NA	NA	NA	47248915	47268812	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_47249000_47259790_47259980_47260408_47260676_47261240_47261450_47261546_47261727_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_32845.known	chr11	+	1330	9	FSM	ENSG00000025434.19	ENST00000407404.5	1330	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	38.1870396862601	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAAACATTCCTGGGAGCT	47247954	True	NA	-55	True	NA	NA	NA	47248955	47268781	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_47249000_47259179_47259260_47259790_47259980_47260408_47260676_47261240_47261450_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_32850.known	chr11	-	1719	9	FSM	ENSG00000134575.13	ENST00000529444.7	1719	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	28.7565209995924	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGAGTGGTGGGAAGGGAG	-47247027	True	NA	NA	False	NA	NA	NA	47248802	47239492	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_47240250_47242722_47242899_47243017_47243125_47243238_47243322_47244734_47244868_47245681_47245835_47247640_47247728_47248037_47248134_47248675
transcript_32854.known	chr11	+	1704	8	FSM	ENSG00000025434.19	ENST00000481020.5	1704	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	28.4827194299008	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGTCAAAGGGTTGCGAG	47247922	True	NA	-5	True	ATTAAA	-2	NA	47248923	47268831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_47249000_47259790_47259980_47260408_47260676_47261240_47261450_47261546_47262019_47267912_47268027_47268260_47268356_47268549
transcript_32856.known	chr11	+	1352	8	FSM	ENSG00000025434.19	ENST00000405576.5	1352	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	34.2446182275554	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCGAGTTTTGTGGCTAC	47247914	True	NA	7	True	ATTAAA	-14	NA	47248915	47268843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_47249000_47259790_47259980_47260408_47260676_47261240_47261450_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_32857.nic	chr11	+	1314	8	NIC	ENSG00000025434.19	novel	1501	9	NA	NA	-47	0	combination_of_known_junctions	TRUE	canonical	3	14	junction_2	35.8169951678968	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGAGTTTTGTGGCTACTG	NA	False	NA	9	True	ATTAAA	-16	NA	47248868	47268845	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_47249000_47259790_47259980_47261240_47261450_47261546_47261727_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_32870.known	chr11	+	1480	9	FSM	ENSG00000025434.19	ENST00000405853.7	1480	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	34.6876689185076	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCGAGTTTTGTGGCTAC	47257604	True	NA	7	True	ATTAAA	-14	NA	47257997	47268843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_47258130_47259179_47259260_47259790_47259980_47260408_47260676_47261240_47261450_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_32871.known	chr11	+	2731	9	FSM	ENSG00000025434.19	ENST00000467728.5	2731	9	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	24.9195580819564	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGAGTTTTGTGGCTACTG	47257585	True	NA	9	True	ATTAAA	-16	NA	47257978	47268845	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_47259260_47259790_47259980_47260408_47260676_47261240_47261450_47261546_47261727_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_32878.known	chr11	+	4988	33	FSM	ENSG00000110514.19	ENST00000395344.7	4988	33	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	28.5883874752932	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAACTGCCTTCCCCTCA	47268934	True	NA	NA	False	NA	NA	NA	47269683	47329357	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_47269751_47273826_47273977_47274562_47275160_47275898_47276203_47276731_47276864_47278164_47278279_47278998_47279080_47281574_47281754_47282380_47282617_47282812_47282970_47284177_47284282_47284374_47284566_47284940_47285066_47285450_47285591_47286432_47286535_47289390_47289494_47289866_47290054_47290148_47290300_47290609_47290817_47293882_47293984_47295495_47295568_47295896_47296056_47308590_47308700_47309280_47309402_47309506_47309613_47311731_47311843_47315219_47315328_47323670_47323836_47324264_47324338_47324470_47324578_47326737_47326808_47328657_47328705_47329045
transcript_32886.nic	chr11	+	5736	33	NIC	ENSG00000110514.19	novel	5823	33	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_13	25.4111311424246	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGGCTCCCTGGCTGCCT	47268648	True	NA	15	True	AATAAA	-15	NA	47270117	47330031	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_47270247_47273826_47273977_47274562_47275160_47275898_47276203_47276731_47276864_47278164_47278279_47278998_47279080_47281574_47281754_47282380_47282617_47282812_47282970_47284177_47284282_47284374_47284566_47284940_47285066_47285450_47285591_47286432_47286535_47289390_47289494_47289866_47290054_47290148_47290300_47290609_47290817_47293882_47293984_47295495_47295580_47295896_47296056_47308590_47308700_47309280_47309402_47309506_47309613_47311731_47311843_47315219_47315328_47323670_47323836_47324264_47324338_47324470_47324578_47326737_47326808_47328657_47328705_47329045
transcript_3289.known	chr1	+	1110	1	FSM	ENSG00000261135.1	ENST00000562878.1	1110	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGACTCATCTTTGAC	16514628	True	NA	4	True	AATAAA	-16	NA	16514644	16515754	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_16514600_16515800
transcript_32894.known	chr11	+	5684	33	FSM	ENSG00000110514.19	ENST00000402799.5	5684	33	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	28.0735640772596	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGGCTCCCTGGCTGCCT	47268924	True	NA	15	True	AATAAA	-15	NA	47269673	47330031	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_47269751_47273826_47273977_47274562_47275160_47275898_47276203_47276731_47276864_47278164_47278279_47278998_47279080_47281574_47281754_47282380_47282617_47282812_47282970_47284177_47284282_47284374_47284566_47284940_47285066_47285450_47285591_47286432_47286535_47289390_47289494_47289866_47290054_47290148_47290300_47290609_47290817_47293882_47293984_47295495_47295580_47295896_47296056_47308590_47308700_47309280_47309402_47309506_47309613_47311731_47311843_47315219_47315328_47323670_47323836_47324264_47324338_47324470_47324578_47326737_47326808_47328657_47328705_47329045
transcript_32895.known	chr11	+	5823	33	FSM	ENSG00000110514.19	ENST00000402192.6	5823	33	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_21	26.7847321248505	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCAGGCTCCCTGGCTGCC	47268686	True	NA	14	True	AATAAA	-14	NA	47270155	47330030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_47270247_47273826_47273977_47274562_47275160_47275898_47276203_47276731_47276864_47278164_47278279_47278998_47279080_47281574_47281754_47282380_47282617_47282812_47282970_47284177_47284282_47284374_47284566_47284940_47285195_47285450_47285591_47286432_47286535_47289390_47289494_47289866_47290054_47290148_47290300_47290609_47290817_47293882_47293984_47295495_47295577_47295896_47296056_47308590_47308700_47309280_47309402_47309506_47309613_47311731_47311843_47315219_47315328_47323670_47323836_47324264_47324338_47324470_47324578_47326737_47326808_47328657_47328705_47329045
transcript_32896.known	chr11	-	1374	5	FSM	ENSG00000066336.12	ENST00000378538.8	1374	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCTTGCAGCACAGAGTC	-47378530	True	NA	NA	False	AGTAAA	-16	NA	47378547	47354859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_47355547_47358843_47359007_47359852_47360041_47375632_47375730_47378308
transcript_3290.known	chr1	+	327	2	FSM	ENSG00000224174.2	ENST00000452795.2	327	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAAAATTACGTTGGTT	16520668	False	NA	5	True	AATAAA	-19	NA	16520693	16521796	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_16520788_16521563
transcript_32901.known	chr11	+	2330	10	FSM	ENSG00000165915.14	ENST00000362021.9	2330	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	67.8245740090284	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTGCCTTGGTTCTGCA	47407535	True	NA	30	True	AATAAA	-14	NA	47408589	47416496	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_47408663_47410086_47410396_47411925_47412040_47412345_47412468_47413399_47413508_47413596_47413687_47414424_47414476_47414776_47414910_47415038_47415160_47415287
transcript_32902.nic	chr11	+	2358	10	NIC	ENSG00000165915.14	novel	2330	10	NA	NA	-43	0	intron_retention	FALSE	canonical	3	162	junction_1	25.3542798393652	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTGCCTTGGTTCTGCA	47407486	True	NA	30	True	AATAAA	-14	NA	47408540	47416496	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_47408663_47410086_47410396_47411925_47412040_47412345_47412468_47413399_47413508_47413596_47413687_47414424_47414476_47414776_47414910_47415059_47415160_47415287
transcript_32906.nic	chr11	+	2485	9	NIC	ENSG00000165915.14	novel	2330	10	NA	NA	-43	0	intron_retention	FALSE	canonical	3	162	junction_1	26.0528309402261	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGCCTTGGTTCTGC	47407486	True	NA	29	True	AATAAA	-13	NA	47408540	47416495	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_47408663_47410086_47410396_47411925_47412040_47412345_47412468_47413399_47413508_47413596_47413687_47414424_47414476_47414776_47414910_47415059
transcript_32911.nic	chr11	+	3096	9	NIC	ENSG00000165915.14	novel	2330	10	NA	NA	-43	0	intron_retention	FALSE	canonical	3	162	junction_1	25.3118055460293	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTGCCTTGGTTCTGCA	47407486	True	NA	30	True	AATAAA	-14	NA	47408540	47416496	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_47408663_47410086_47410396_47411925_47412040_47412345_47412468_47413399_47413508_47413596_47414476_47414776_47414910_47415059_47415160_47415287
transcript_32914.nic	chr11	+	2250	9	NIC	ENSG00000165915.14	novel	2330	10	NA	NA	-43	0	intron_retention	FALSE	canonical	3	21	junction_4	65.5447127921086	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTGCCTTGGTTCTGCA	47407486	True	NA	30	True	AATAAA	-14	NA	47408540	47416496	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_47408663_47410086_47410396_47411925_47412040_47412345_47412468_47413596_47413687_47414424_47414476_47414776_47414910_47415059_47415160_47415287
transcript_32936.known	chr11	+	785	5	FSM	ENSG00000165915.14	ENST00000531419.5	785	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	85.3445223784163	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCCAGCGCCCTCATCTA	47407550	True	NA	NA	False	NA	NA	NA	47408604	47413778	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_47408663_47410086_47410396_47411925_47412040_47412345_47412468_47413596
transcript_32939.nic	chr11	-	1439	12	NIC	ENSG00000165916.9	novel	1540	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_11	586.403071260265	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCGCTGCTTGTCTGCC	-47404933	True	NA	-8	True	AATAAA	-16	NA	47426250	47418774	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_47418946_47419115_47419198_47420263_47420410_47420630_47420728_47422573_47422723_47422829_47422974_47424045_47424184_47424428_47424492_47424606_47424712_47425120_47425247_47425866_47425951_47426116
transcript_32940.known	chr11	-	1540	12	FSM	ENSG00000165916.9	ENST00000298852.8	1540	12	0	0	0	0	multi-exon	FALSE	canonical	3	1881	junction_11	122.136896503896	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCGCTGCTTGTCTGCC	-47421964	True	NA	-8	True	AATAAA	-16	NA	47426439	47418774	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_47418946_47419115_47419198_47420263_47420410_47420630_47420728_47422573_47422723_47422829_47422974_47424045_47424184_47424428_47424492_47424606_47424712_47425120_47425247_47425866_47425951_47426204
transcript_3295.nic	chr1	-	1249	4	NIC	ENSG00000219481.11	novel	5932	29	NA	NA	-10	-441	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	51.3830927662225	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAATATGTCCAAATACAT	-16610812	True	NA	NA	False	NA	NA	NA	16613572	16594002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_16594662_16594930_16595014_16608507_16608780_16613337
transcript_32950.known	chr11	-	1452	6	FSM	ENSG00000165917.10	ENST00000352508.7	1452	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.8	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGGGATTCCGACTTTC	NA	False	NA	-8	True	AATAAA	-15	NA	47449143	47437763	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_47438048_47438731_47438932_47441822_47441922_47442655_47442815_47447811_47448151_47448772
transcript_3296.known	chr1	-	2752	3	FSM	ENSG00000219481.11	ENST00000599069.5	2752	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	70	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTGTGCTTAGAAATAAAT	-16610802	True	NA	NA	False	AATAAA	-35	NA	16613562	16599588	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_16601844_16608507_16608780_16613337
transcript_3297.nnic	chr1	-	4238	3	NNC	ENSG00000219481.11	novel	2752	3	NA	NA	-10	-5	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	60	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACATGTTGTGCTTAGAAA	-16610812	True	NA	NA	False	AATAAA	-30	NA	16613572	16599593	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_16603325_16608507_16608780_16613337
transcript_32979.known	chr11	-	3650	16	FSM	ENSG00000149187.19	ENST00000531165.5	3650	16	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_15	169.184107475325	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAGAAAACAAA	-47534988	True	NA	NA	False	AATAAA	-19	NA	47553117	47470315	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_47472103_47472190_47472358_47473087_47473232_47475335_47475522_47476845_47476960_47477296_47477426_47478876_47478953_47482694_47482857_47483452_47483533_47484388_47484524_47486749_47486799_47487158_47487242_47488836_47489025_47499452_47499605_47500860_47500933_47552991
transcript_3299.nnic	chr1	-	4032	3	NNC	ENSG00000219481.11	novel	2752	3	NA	NA	-10	-197	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	60	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGAAGCTGTCTTTATT	-16610812	True	NA	NA	False	AATAAA	-39	NA	16613572	16599799	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_16603325_16608507_16608780_16613337
transcript_33.known	ERCC-00079	+	628	1	FSM	ERCC-00079A	DQ883652	628	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00079_+_0_600
transcript_3301.known	chr1	-	2755	3	FSM	ENSG00000219481.11	ENST00000449853.2	2755	3	0	0	0	0	multi-exon	TRUE	canonical	3	38	junction_1	53.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATTTTCTGGACATAGGT	-16610774	True	NA	-3	True	AATAAA	-25	NA	16613534	16605405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_16607692_16608507_16608780_16613337
transcript_33014.known	chr11	-	4583	14	FSM	ENSG00000149187.19	ENST00000310513.10	4583	14	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	107.541762907397	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTCAGAGTTACTGATT	-47534988	True	NA	1	True	ATTAAA	-19	NA	47553117	47465932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_47468892_47472190_47472358_47473087_47473232_47475335_47475522_47476845_47476957_47477296_47477426_47478876_47478941_47482694_47482857_47483452_47483533_47484388_47484524_47486749_47486799_47487158_47487242_47488836_47489025_47552991
transcript_33040.nic	chr11	-	3471	14	NIC	ENSG00000149187.19	novel	3650	16	NA	NA	-45	0	intron_retention	FALSE	canonical	3	171	junction_1	108.120577003629	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAGAAAACAAA	-47535048	True	NA	NA	False	AATAAA	-19	NA	47553177	47470315	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_47472103_47472190_47472358_47473087_47473232_47475335_47475522_47476845_47476957_47477296_47477426_47478876_47478941_47482694_47482857_47483452_47483533_47484388_47484524_47486749_47486799_47487158_47487242_47488836_47489025_47552991
transcript_33042.nic	chr11	-	3471	14	NIC	ENSG00000149187.19	novel	3650	16	NA	NA	-33	0	intron_retention	FALSE	canonical	3	171	junction_1	105.256856865288	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAGAAAACAAA	-47535036	True	NA	NA	False	AATAAA	-19	NA	47553165	47470315	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_47472103_47472190_47472358_47473087_47473232_47475335_47475522_47476845_47476957_47477296_47477426_47478876_47478953_47482694_47482857_47483452_47483533_47484388_47484524_47486749_47486799_47487158_47487242_47488836_47489025_47552991
transcript_33045.nic	chr11	-	3452	14	NIC	ENSG00000149187.19	novel	3650	16	NA	NA	-23	0	intron_retention	FALSE	canonical	3	162	junction_5	119.896651748878	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAGAAAACAAA	-47535026	True	NA	NA	False	AATAAA	-19	NA	47553155	47470315	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_47472103_47472190_47472358_47473087_47473232_47475335_47475522_47476845_47476960_47477296_47477426_47478876_47478941_47482694_47482857_47483452_47483533_47484388_47484524_47486749_47486799_47487158_47487242_47488836_47489025_47552991
transcript_33047.nic	chr11	-	3555	14	NIC	ENSG00000149187.19	novel	3650	16	NA	NA	-114	0	intron_retention	FALSE	canonical	3	162	junction_5	117.448263820953	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAGAAAACAAA	NA	False	NA	NA	False	AATAAA	-19	NA	47553246	47470315	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_47472103_47472190_47472358_47473087_47473232_47475335_47475522_47476845_47476960_47477296_47477426_47478876_47478953_47482694_47482857_47483452_47483533_47484388_47484524_47486749_47486799_47487158_47487242_47488836_47489025_47552991
transcript_33056.nic	chr11	-	3578	13	ISM	ENSG00000149187.19	ENST00000310513.10	4583	14	-42	4346	-27	15	5prime_fragment	FALSE	canonical	3	185	junction_6	94.2427052879956	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAGGTTGGGGAGGCGCT	-47535030	True	NA	NA	False	AATAAA	-43	NA	47553159	47470278	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_47472358_47473087_47473232_47475335_47475522_47476845_47476957_47477296_47477426_47478876_47478941_47482694_47482857_47483452_47483533_47484388_47484524_47486749_47486799_47487158_47487242_47488836_47489025_47552991
transcript_33057.nic	chr11	-	3590	13	NIC	ENSG00000149187.19	novel	8132	15	NA	NA	-27	15	intron_retention	FALSE	canonical	3	207	junction_6	90.3156117303217	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAGGTTGGGGAGGCGCT	-47535030	True	NA	NA	False	AATAAA	-43	NA	47553159	47470278	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_47472358_47473087_47473232_47475335_47475522_47476845_47476957_47477296_47477426_47478876_47478953_47482694_47482857_47483452_47483533_47484388_47484524_47486749_47486799_47487158_47487242_47488836_47489025_47552991
transcript_33062.nic	chr11	-	3587	13	NIC	ENSG00000149187.19	novel	3650	16	NA	NA	-33	15	intron_retention	FALSE	canonical	3	162	junction_4	110.047590715209	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAGGTTGGGGAGGCGCT	-47535036	True	NA	NA	False	AATAAA	-43	NA	47553165	47470278	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_47472358_47473087_47473232_47475335_47475522_47476845_47476960_47477296_47477426_47478876_47478941_47482694_47482857_47483452_47483533_47484388_47484524_47486749_47486799_47487158_47487242_47488836_47489025_47552991
transcript_33063.nic	chr11	-	3609	13	NIC	ENSG00000149187.19	novel	8132	15	NA	NA	-43	15	intron_retention	FALSE	canonical	3	162	junction_4	106.868299010199	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAGGTTGGGGAGGCGCT	-47535046	True	NA	NA	False	AATAAA	-43	NA	47553175	47470278	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_47472358_47473087_47473232_47475335_47475522_47476845_47476960_47477296_47477426_47478876_47478953_47482694_47482857_47483452_47483533_47484388_47484524_47486749_47486799_47487158_47487242_47488836_47489025_47552991
transcript_3308.nnic	chr1	-	2895	14	NNC	ENSG00000215908.10	novel	2575	13	NA	NA	-2	0	at_least_one_novel_splicesite	TRUE	canonical	3	23	junction_13	30.0209000176514	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTCAGTGTTCTCCTGC	-16642291	True	NA	-7	True	AATAAA	-23	NA	16644674	16618255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_16619104_16619844_16620025_16625774_16626006_16626352_16626500_16627144_16627290_16628467_16628651_16630889_16631110_16631529_16631614_16632274_16632372_16633094_16633347_16635026_16635169_16642766_16642851_16643027_16643146_16644510
transcript_33087.known	chr11	-	2460	4	FSM	ENSG00000123444.14	ENST00000395288.6	2460	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	48.6643835080875	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGTCTGTGTTGAA	-47576564	True	NA	-2	True	AATAAA	-14	NA	47578969	47572197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_47573791_47575592_47575700_47577410_47578029_47578827
transcript_33088.nic	chr11	-	2389	4	NIC	ENSG00000123444.14	novel	2460	4	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	53.3687382483624	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGTCTGTGTTGAA	-47576577	True	NA	-2	True	AATAAA	-14	NA	47578982	47572197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_47573791_47575592_47575700_47577410_47578029_47578911
transcript_33089.known	chr11	-	2357	4	FSM	ENSG00000123444.14	ENST00000430070.7	2357	4	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	18.6726180988812	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTCTGTGTTGAAT	-47576565	True	NA	-1	True	AATAAA	-15	NA	47578970	47572196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_47573791_47575592_47575700_47577410_47578029_47578932
transcript_3309.nic	chr1	-	2809	14	NIC	ENSG00000215908.10	novel	2575	13	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_13	27.294362944035	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTCAGTGTTCTCCTGC	-16642340	True	NA	-7	True	AATAAA	-23	NA	16644723	16618255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_16619104_16619844_16620025_16625774_16626006_16626352_16626500_16627144_16627290_16628467_16628651_16630889_16631110_16631529_16631614_16632274_16632372_16633094_16633347_16635026_16635169_16642766_16642851_16643027_16643146_16644645
transcript_33092.known	chr11	+	1014	2	FSM	ENSG00000110536.14	ENST00000426530.2	1014	2	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGCCTAATAATATTTAG	47565401	False	NA	31	True	NA	NA	NA	47565429	47571927	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_47565987_47571470
transcript_33094.known	chr11	+	2462	4	FSM	ENSG00000110536.14	ENST00000326674.10	2462	4	0	0	0	0	multi-exon	FALSE	canonical	3	836	junction_3	14.2361043360417	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCAGTGTCTTGCCACC	47557560	True	NA	11	True	AATAAA	-21	NA	47565598	47573461	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_47565797_47565905_47565987_47569699_47569892_47571470
transcript_33095.known	chr11	-	3079	3	FSM	ENSG00000123444.14	ENST00000533290.5	3079	3	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	4	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGTCTGTGTTGAA	-47576384	False	NA	-2	True	AATAAA	-14	NA	47578789	47572197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_47573791_47575592_47575700_47577410
transcript_33096.known	chr11	+	894	7	FSM	ENSG00000213619.11	ENST00000263774.9	894	7	0	0	0	0	multi-exon	FALSE	canonical	3	1152	junction_2	38.7499103941616	243	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTTTGTGTGTGCTTGTA	47566137	True	NA	29	True	AATAAA	-17	NA	47579073	47584562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_47579159_47579268_47579335_47580524_47580623_47580834_47580985_47582087_47582214_47582348_47582469_47584313
transcript_33097.known	chr11	-	1413	2	FSM	ENSG00000172247.4	ENST00000302514.4	1413	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCCTGCGCTGTCTTGAC	-47593711	True	NA	-4	True	AATAAA	-36	NA	47594411	47589666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_47590816_47594147
transcript_33100.known	chr11	-	2522	13	FSM	ENSG00000109919.10	ENST00000302503.8	2522	13	0	0	0	0	multi-exon	FALSE	canonical	3	1078	junction_10	92.9043713838171	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGTTTATCCTGTGGC	-47627796	True	NA	-11	True	AGTAAA	-18	NA	47642559	47617316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_47618920_47622700_47622777_47625673_47625742_47627079_47627128_47628952_47629047_47630554_47630615_47631035_47631088_47631653_47631712_47634671_47634735_47635544_47635572_47638698_47638806_47638966_47639052_47642378
transcript_33107.nnic	chr11	-	1217	12	NIC	ENSG00000109919.10	novel	2522	13	NA	NA	-102	0	combination_of_known_splicesites	FALSE	canonical	3	99	junction_2	350.732221087671	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTCTGCCTTTTTTGTT	NA	False	NA	-11	True	NA	NA	NA	47642709	47618703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_47618920_47622700_47622777_47627079_47627128_47628952_47629047_47630554_47630615_47631035_47631088_47631653_47631712_47634671_47634735_47635544_47635572_47638698_47638806_47638966_47639052_47642378
transcript_33119.nic	chr11	-	4152	18	NIC	ENSG00000109920.13	novel	4035	17	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	54.7470433386613	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGTTATTCTGATTATG	-47761680	True	NA	2	True	AATAAA	-43	NA	47767355	47716493	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_47717513_47719928_47720087_47722975_47723317_47724027_47724173_47724467_47724779_47731373_47731562_47732116_47732220_47732536_47732671_47734024_47734130_47736615_47736741_47743952_47744164_47746055_47746395_47750915_47751037_47751142_47751291_47752915_47753103_47754527_47754665_47765269_47765363_47767068
transcript_33124.known	chr11	-	4035	17	FSM	ENSG00000109920.13	ENST00000263773.10	4035	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	49.6122464720154	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGTTATTCTGATTATG	-47761666	True	NA	2	True	AATAAA	-43	NA	47767341	47716493	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_47717513_47719928_47720087_47722975_47723317_47724027_47724173_47724467_47724779_47731373_47731562_47732536_47732671_47734024_47734130_47736615_47736741_47743952_47744164_47746055_47746395_47750915_47751037_47751142_47751291_47752915_47753103_47754527_47754665_47765269_47765363_47767068
transcript_33129.nic	chr11	-	2882	15	ISM	ENSG00000109920.13	ENST00000263773.10	4035	17	-30	6488	-30	0	5prime_fragment	FALSE	canonical	0	0	junction_14	46.8987184890842	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAAGGTATAATAAATTTC	-47767339	False	NA	NA	False	AAAAAG	-9	NA	47767371	47722981	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_47723317_47724027_47724173_47724467_47724779_47731373_47731562_47732536_47732671_47734024_47734130_47736615_47736741_47743952_47744164_47746055_47746395_47750915_47751037_47751142_47751291_47752915_47753103_47754527_47754665_47765269_47765363_47767068
transcript_33134.known	chr11	-	2515	11	FSM	ENSG00000109920.13	ENST00000534003.5	2515	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	44.322116375462	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCACAAAAAAAGAGAAA	-47761611	True	NA	NA	False	AATGAA	-26	NA	47767286	47731839	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_47732671_47734024_47734130_47736615_47736741_47743952_47744164_47746055_47746395_47750915_47751037_47751142_47751291_47752915_47753103_47754527_47754665_47765269_47765363_47767068
transcript_33136.nic	chr11	-	1580	9	ISM	ENSG00000109920.13	ENST00000534003.5	2515	11	-99	4874	-44	-4232	5prime_fragment	FALSE	canonical	0	0	junction_8	49.325291433503	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGATGAGAATTCAGATAAA	-47767353	False	NA	NA	False	NA	NA	NA	47767385	47736713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_47736741_47743952_47744164_47746055_47746395_47750915_47751037_47751142_47751291_47752915_47753103_47754527_47754665_47765269_47765363_47767068
transcript_3314.nnic	chr1	-	2811	13	NNC	ENSG00000215908.10	novel	2575	13	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_12	30.4670815070226	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTCAGTGTTCTCCTGC	-16642291	True	NA	-7	True	AATAAA	-23	NA	16644674	16618255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_16619104_16619844_16620025_16625774_16626006_16626352_16626500_16627144_16627290_16628467_16628651_16630889_16631110_16631529_16631614_16632274_16632372_16633094_16633347_16635026_16635169_16643027_16643146_16644510
transcript_33143.nic	chr11	-	1118	7	ISM	ENSG00000109920.13	ENST00000534003.5	2515	11	-48	14389	7	-2412	5prime_fragment	FALSE	canonical	0	0	junction_6	56.494837522261	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAGTACAACAGTAGAAGAA	-47761659	True	NA	NA	False	AGTAAA	-6	NA	47767334	47746228	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_47746395_47750915_47751037_47751142_47751291_47752915_47753103_47754527_47754665_47765269_47765363_47767068
transcript_33144.nic	chr11	-	1153	7	ISM	ENSG00000109920.13	ENST00000534003.5	2515	11	-150	14456	5	-2479	5prime_fragment	FALSE	canonical	0	0	junction_6	56.494837522261	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAAGAGAGATGGAG	-47767404	False	NA	NA	False	AATAAA	-2	NA	47767436	47746295	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_47746395_47750915_47751037_47751142_47751291_47752915_47753103_47754527_47754665_47765269_47765363_47767068
transcript_33147.nic	chr11	-	942	6	ISM	ENSG00000109920.13	ENST00000534003.5	2515	11	-52	19090	3	1790	5prime_fragment	FALSE	canonical	0	0	junction_5	59.7380950483023	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGTTAAAAAGGTCAGT	-47761663	True	NA	-8	True	AGTAAA	-23	NA	47767338	47750929	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_47751037_47751142_47751291_47752915_47753103_47754527_47754665_47765269_47765363_47767068
transcript_3315.nnic	chr1	-	2725	13	NIC	ENSG00000215908.10	novel	2575	13	NA	NA	-37	0	combination_of_known_splicesites	FALSE	canonical	3	39	junction_11	27.4195793792198	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTCAGTGTTCTCCTGC	-16642340	True	NA	-7	True	AATAAA	-23	NA	16644723	16618255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_16619104_16619844_16620025_16625774_16626006_16626352_16626500_16627144_16627290_16628467_16628651_16630889_16631110_16631529_16631614_16632274_16632372_16633094_16633347_16635026_16635169_16643027_16643146_16644645
transcript_33151.known	chr11	-	5376	36	FSM	ENSG00000030066.13	ENST00000378460.6	5376	36	0	0	0	0	multi-exon	FALSE	canonical	3	546	junction_21	68.4730484741766	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACTGAGGTGTGTGTTTC	-47848422	False	NA	-3	True	NA	NA	NA	47848467	47778086	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_47779195_47780342_47780448_47783072_47783199_47784921_47785064_47786452_47786555_47788181_47788306_47788500_47788612_47791929_47791991_47792785_47792947_47797778_47797885_47797977_47798075_47798167_47798263_47798367_47798464_47801810_47801931_47803437_47803537_47804548_47804619_47806152_47806313_47807069_47807141_47808395_47808530_47812063_47812225_47812301_47812430_47812881_47813048_47813315_47813416_47815478_47815650_47815945_47816030_47818055_47818125_47819373_47819459_47821723_47821822_47822086_47822165_47835650_47835810_47836886_47837002_47837544_47837624_47839842_47840066_47840377_47840589_47847847_47847960_47848218
transcript_33152.nnic	chr11	-	5064	36	NNC	ENSG00000030066.13	novel	5376	36	NA	NA	-16	7	at_least_one_novel_splicesite	FALSE	canonical	3	78	junction_3	120.365145134567	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCTGTATACTACTTGCT	-47839415	True	NA	-26	True	ATTAAA	-19	NA	47848350	47778229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_47779195_47780342_47780448_47783072_47783147_47784921_47785064_47786452_47786555_47788181_47788306_47788500_47788612_47791929_47791991_47792785_47792947_47797778_47797885_47797977_47798075_47798167_47798263_47798367_47798464_47801810_47801931_47803437_47803537_47804548_47804619_47806152_47806313_47807069_47807141_47808395_47808530_47812063_47812225_47812301_47812430_47812881_47813048_47813315_47813416_47815478_47815650_47815945_47816030_47818055_47818125_47819373_47819459_47821723_47821822_47822086_47822165_47835650_47835810_47836886_47837002_47837544_47837624_47839842_47840066_47840377_47840589_47847847_47847960_47848218
transcript_33165.known	chr11	-	4138	28	FSM	ENSG00000030066.13	ENST00000528071.5	4138	28	0	0	0	0	multi-exon	FALSE	canonical	3	546	junction_13	55.5093140888742	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTGTTTTGTTTTATCA	-47839399	True	NA	2	True	AATAAA	-22	NA	47848334	47792011	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_47792947_47797778_47797885_47797977_47798075_47798167_47798263_47798367_47798464_47801810_47801931_47803437_47803537_47804548_47804619_47806152_47806313_47807069_47807141_47808395_47808530_47812063_47812225_47812301_47812430_47812881_47813048_47813315_47813416_47815478_47815650_47815945_47816030_47818055_47818125_47819373_47819459_47821723_47821822_47822086_47822165_47835650_47835810_47836886_47837002_47837544_47837624_47839842_47840066_47840377_47840589_47847847_47847960_47848218
transcript_33169.nic	chr11	-	1762	9	ISM	ENSG00000030066.13	ENST00000528071.5	4138	28	-223	29364	-2	0	5prime_fragment	FALSE	canonical	3	594	junction_3	51.7528682779998	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-47848512	True	NA	NA	False	NA	NA	NA	47848557	47821375	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_47821822_47822086_47822165_47835650_47835810_47836886_47837002_47837544_47837624_47839842_47840066_47840377_47840589_47847847_47847960_47848218
transcript_33174.nic	chr11	-	1020	4	ISM	ENSG00000030066.13	ENST00000528071.5	4138	28	-16	47489	-16	0	5prime_fragment	FALSE	canonical	3	632	junction_2	64.240866190369	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGTGTCTTGCCTGGA	-47839415	True	NA	-3	True	ATTAAA	-40	NA	47848350	47839500	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_47840066_47840377_47840589_47847847_47847960_47848218
transcript_33175.known	chr11	-	1537	3	FSM	ENSG00000030066.13	ENST00000526870.1	1537	3	0	0	0	0	multi-exon	FALSE	canonical	3	632	junction_1	77	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGTGTCTTGCCTGGA	-47848510	False	NA	-3	True	ATTAAA	-40	NA	47848555	47839500	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_47840589_47847847_47847960_47848218
transcript_33176.known	chr11	+	3158	9	FSM	ENSG00000149177.14	ENST00000440289.6	3158	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_8	12.1243556529821	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGACAGATTCCTTGAAAC	47979273	False	NA	NA	False	AATAAA	-26	NA	47980579	48132720	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_47981009_48110057_48110077_48112746_48112984_48121002_48121267_48123612_48123871_48124967_48125187_48127779_48128044_48130458_48130717_48131510
transcript_33177.nic	chr11	+	2092	8	ISM	ENSG00000149177.14	ENST00000440289.6	3158	9	-64	1924	-43	-1924	5prime_fragment	FALSE	canonical	3	50	junction_6	6.67312612235809	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTTTTTCTTTTAATTA	47979209	True	NA	5	True	AATAAA	-16	NA	47980515	48130796	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_47981009_48110057_48110077_48112746_48112984_48121002_48121267_48123612_48123871_48124967_48125187_48127779_48128044_48130458
transcript_33196.known	chr11	-	5820	12	FSM	ENSG00000149115.14	ENST00000358252.8	5820	12	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_11	102.06334121434	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGCTGTCCAGGTGGTG	-57317119	True	NA	-22	True	AATAAA	-17	NA	57324952	57299641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_57300082_57300527_57300601_57300883_57301042_57301806_57301944_57302073_57302225_57302458_57302826_57308394_57310557_57312533_57313890_57317817_57317888_57320078_57320713_57321791_57321951_57324839
transcript_33212.nic	chr11	-	3765	8	NIC	ENSG00000149115.14	novel	5820	12	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_7	160.980668125723	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGCTGTCCAGGTGGTG	-57311124	True	NA	-22	True	AATAAA	-17	NA	57311514	57299641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_57300082_57300527_57300601_57300883_57301042_57301806_57301944_57302073_57302225_57302458_57302826_57308394_57310557_57311237
transcript_33223.known	chr11	-	2831	17	FSM	ENSG00000149136.9	ENST00000278412.7	2831	17	0	0	0	0	multi-exon	FALSE	canonical	3	893	junction_10	110.060335015618	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTCCTCATGCTTTCTT	-57312421	True	NA	-23	True	AATAAA	-19	NA	57335892	57325987	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_57326479_57326702_57326890_57327425_57327515_57327711_57327883_57328296_57328427_57330092_57330139_57330290_57330430_57330854_57330928_57331667_57331890_57332151_57332281_57332382_57332487_57332624_57332856_57332958_57333150_57333434_57333541_57334462_57334649_57335067_57335241_57335729
transcript_33235.nic	chr11	-	2179	16	ISM	ENSG00000149136.9	ENST00000278412.7	2831	17	-8	884	-8	0	5prime_fragment	FALSE	canonical	3	893	junction_9	109.164992353573	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAAGTAAAGGTAAAGA	-57312429	True	NA	-19	True	AATACA	-20	NA	57335900	57326871	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_57326890_57327425_57327515_57327711_57327883_57328296_57328427_57330092_57330139_57330290_57330430_57330854_57330928_57331667_57331890_57332151_57332281_57332382_57332487_57332624_57332856_57332958_57333150_57333434_57333541_57334462_57334649_57335067_57335241_57335729
transcript_3324.known	chr1	-	2575	13	FSM	ENSG00000215908.10	ENST00000639456.1	2575	13	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	33.0676915163763	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTGACAAGAGTGTAACTA	-16642303	True	NA	-24	True	AATAAA	-6	NA	16644686	16618272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_16619104_16625774_16626006_16626352_16626500_16627144_16627290_16628467_16628651_16630889_16631110_16631529_16631614_16632274_16632372_16633094_16633347_16635026_16635169_16642766_16642851_16643027_16643146_16644645
transcript_33241.nic	chr11	-	2219	15	ISM	ENSG00000149136.9	ENST00000278412.7	2831	17	-66	1438	-66	-554	5prime_fragment	FALSE	canonical	3	893	junction_8	95.2528321931496	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGTCGAGAACATGGC	NA	False	NA	-1	True	AAAAAG	-44	NA	57335958	57327425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_57327515_57327711_57327883_57328296_57328427_57330092_57330139_57330290_57330430_57330854_57330928_57331667_57331890_57332151_57332281_57332382_57332487_57332624_57332856_57332958_57333150_57333434_57333541_57334462_57334649_57335067_57335241_57335729
transcript_33255.known	chr11	+	3792	12	FSM	ENSG00000109991.10	ENST00000263314.3	3792	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	1.43163779527487	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTGGGATTTGAACCTAG	57338339	True	NA	NA	False	AATAAA	-16	NA	57338351	57372396	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57338670_57346543_57346680_57347115_57347188_57347414_57347479_57348169_57348264_57348626_57348705_57349756_57349899_57350761_57350899_57368008_57368103_57368371_57368438_57369360_57369439_57369883
transcript_33266.nic	chr11	-	2645	14	NIC	ENSG00000134802.18	novel	2619	14	NA	NA	-62	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_12	40.0814259983246	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGTTTCCATCTCTCTA	-57424653	True	NA	0	True	AATAAA	-20	NA	57427183	57406953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_57407897_57409174_57409299_57409934_57410122_57414614_57414732_57414932_57415107_57416572_57416671_57417747_57417888_57420971_57421065_57421296_57421374_57423981_57424029_57425540_57425671_57425988_57426317_57426587_57426653_57427061
transcript_33267.known	chr11	-	2619	14	FSM	ENSG00000134802.18	ENST00000395123.6	2619	14	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_13	45.3628370171942	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGTTTCCATCTCTCTA	-57424415	False	NA	0	True	AATAAA	-20	NA	57426945	57406953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_57407897_57409174_57409299_57409934_57410122_57414614_57414732_57414932_57415107_57416572_57416671_57417747_57417888_57420971_57421065_57421296_57421374_57423981_57424029_57425540_57425671_57425988_57426353_57426587_57426653_57426885
transcript_33268.known	chr11	-	2619	14	FSM	ENSG00000134802.18	ENST00000395124.6	2619	14	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_12	23.2361175707844	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGTTTCCATCTCTCTA	-57424591	True	NA	0	True	AATAAA	-20	NA	57427121	57406953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_57407897_57409174_57409299_57409934_57410122_57414614_57414732_57414932_57415107_57416572_57416671_57417747_57417888_57420971_57421065_57421296_57421374_57423981_57424029_57425540_57425671_57425988_57426353_57426587_57426653_57427061
transcript_3327.nnic	chr1	-	2602	12	NIC	ENSG00000215908.10	novel	2575	13	NA	NA	-32	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_11	30.2247777507568	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTCAGTGTTCTCCTGC	-16642335	True	NA	-7	True	AATAAA	-23	NA	16644718	16618255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_16619104_16619844_16620025_16625774_16626006_16626352_16626500_16627144_16627290_16628467_16628651_16630889_16631110_16631529_16631614_16632274_16632372_16633094_16633347_16635026_16635169_16644645
transcript_33271.nic	chr11	-	2718	14	NIC	ENSG00000134802.18	novel	2619	14	NA	NA	-62	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_12	37.7959329079029	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGTTTCCATCTCTCTA	-57424653	True	NA	0	True	AATAAA	-20	NA	57427183	57406953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_57407897_57409174_57409299_57409934_57410122_57414614_57414732_57414932_57415107_57416572_57416671_57417747_57417888_57420971_57421065_57421296_57421374_57423981_57424029_57425540_57425671_57425988_57426390_57426587_57426653_57427061
transcript_33278.known	chr11	-	1879	14	FSM	ENSG00000134802.18	ENST00000533524.5	1879	14	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_11	55.1034530001921	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGAGGATGGTTTTGTTC	-57424591	True	NA	NA	False	AAGAAA	-43	NA	57427121	57407769	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_57407897_57409174_57409299_57409934_57410122_57414614_57414732_57414932_57415107_57416572_57416671_57417747_57417888_57420971_57421065_57421296_57421374_57423981_57424029_57425540_57425710_57425988_57426390_57426587_57426653_57427061
transcript_33284.nic	chr11	-	2585	13	NIC	ENSG00000134802.18	novel	2619	14	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_12	49.8313823475395	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGTTTCCATCTCTCTA	-57424622	True	NA	0	True	AATAAA	-20	NA	57427152	57406953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_57407897_57409174_57409299_57409934_57410122_57414614_57414732_57414932_57415107_57416572_57416671_57417747_57417888_57420971_57421065_57421296_57421374_57423981_57424029_57425540_57425671_57425988_57426353_57427061
transcript_33297.known	chr11	+	2224	3	FSM	ENSG00000186907.8	ENST00000335099.8	2224	3	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_2	6	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACTGTAAGATTTGTTGA	57458905	True	NA	11	True	ATTAAA	-17	NA	57460527	57477534	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57460897_57467608_57468091_57476161
transcript_33298.nic	chr11	-	2679	16	NIC	ENSG00000149150.9	novel	2514	15	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_15	36.4658744581835	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGCTGGTGTGCGCCTG	-57515318	True	NA	-7	True	AATAAA	-14	NA	57515767	57484535	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_57485243_57487094_57487219_57488915_57488990_57489250_57489393_57491223_57491363_57491590_57491627_57491715_57491863_57493992_57494172_57496030_57496165_57497752_57497846_57500778_57500856_57500987_57501044_57501151_57501330_57513957_57514125_57515099_57515202_57515443
transcript_333.known	chr1	+	3468	14	FSM	ENSG00000187634.13	ENST00000618323.5	3468	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	2.29225606550021	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTGTCTACTGCCTCCC	NA	False	NA	3	True	AATAAA	-13	NA	923922	944574	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_924949_925921_926014_930154_930337_931038_931090_935771_935897_939039_939130_939271_939413_941143_941307_942135_942252_942409_942489_942558_943059_943252_943378_943697_943809_943907
transcript_33305.known	chr11	-	2358	15	FSM	ENSG00000149150.9	ENST00000528450.5	2358	15	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_14	30.6707332411702	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGCTGGTGTGCGCCTG	-57514436	False	NA	-7	True	AATAAA	-14	NA	57514885	57484535	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_57485243_57487094_57487219_57488915_57488990_57489250_57489393_57491223_57491363_57491590_57491627_57491715_57491863_57493992_57494172_57496030_57496165_57497752_57497846_57500778_57500856_57500987_57501044_57501151_57501330_57513957_57514125_57514780
transcript_33306.known	chr11	-	2514	15	FSM	ENSG00000149150.9	ENST00000278426.8	2514	15	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_10	19.9377858881684	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTGGTGTGCGCCTGTC	-57515253	True	NA	-5	True	AATAAA	-16	NA	57515702	57484533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_57485243_57487094_57487219_57488915_57488990_57489250_57489393_57491223_57491363_57491590_57491627_57491715_57491863_57493992_57494172_57496030_57496165_57497752_57497846_57500778_57500856_57500987_57501044_57501151_57501330_57513957_57514125_57515443
transcript_33309.nic	chr11	-	2644	15	NIC	ENSG00000149150.9	novel	2514	15	NA	NA	-9	0	combination_of_known_junctions	TRUE	canonical	2	28	junction_13	27.0902686044495	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGCTGGTGTGCGCCTG	NA	False	NA	-7	True	AATAAA	-14	NA	57515789	57484535	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_57485243_57487094_57487219_57488915_57488990_57489250_57489393_57491223_57491363_57491590_57491627_57491715_57491863_57493992_57494172_57496030_57496165_57497752_57497846_57500778_57500856_57500987_57501044_57501151_57501375_57513957_57514125_57515443
transcript_33317.nic	chr11	-	2506	14	NIC	ENSG00000149150.9	novel	2514	15	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_9	30.948133744194	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGCTGGTGTGCGCCTG	NA	False	NA	-7	True	AATAAA	-14	NA	57515789	57484535	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_57485243_57487094_57487219_57488915_57488990_57489250_57489393_57491223_57491363_57491590_57491627_57491715_57491863_57493992_57494172_57496030_57496165_57500778_57500856_57500987_57501044_57501151_57501330_57513957_57514125_57515443
transcript_33339.known	chr11	-	668	3	FSM	ENSG00000134809.9	ENST00000257245.9	668	3	0	0	0	0	multi-exon	FALSE	canonical	3	880	junction_2	84.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGTGCAAAGCAGTGTGC	-57522259	True	NA	-8	True	TATAAA	-19	NA	57530754	57528463	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_57528919_57530118_57530235_57530657
transcript_33340.known	chr11	-	530	3	FSM	ENSG00000134809.9	ENST00000525158.1	530	3	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	487.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGAAGACTGCCAGGCC	-57522239	True	NA	-18	True	AATAAA	-22	NA	57530734	57528640	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_57528919_57530118_57530294_57530657
transcript_33346.known	chr11	-	1219	4	FSM	ENSG00000156587.16	ENST00000287156.9	1219	4	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_3	60.0721788073869	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGAGTGCAGCTGAGTC	-57564461	True	NA	-11	True	ATTAAA	-13	NA	57567672	57551661	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_57552510_57554436_57554624_57560336_57560433_57567584
transcript_33347.known	chr11	-	1573	4	FSM	ENSG00000156587.16	ENST00000340573.8	1573	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	201.490005266321	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCAGCTGAGTCTTTGAT	-57568023	True	NA	-5	True	ATTAAA	-19	NA	57568284	57551655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_57552510_57554436_57554624_57560336_57560433_57567848
transcript_33348.known	chr11	+	1830	8	FSM	ENSG00000149131.17	ENST00000278407.9	1830	8	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	162.783692709819	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTCTGCTTTGCCTTTG	57595371	True	NA	16	True	AATAAA	-17	NA	57597684	57614848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57597723_57598248_57598322_57599878_57600378_57602034_57602170_57606009_57606214_57606407_57606548_57611716_57611937_57614327
transcript_33350.nic	chr11	+	2353	7	ISM	ENSG00000149131.17	ENST00000676670.1	2084	8	-499	4314	0	0	5prime_fragment	FALSE	canonical	3	428	junction_2	69.184937345896	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTCTCTGCTTTGCCT	57595371	True	NA	13	True	AATAAA	-14	NA	57597684	57614845	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_57598322_57599878_57600378_57602034_57602170_57606009_57606214_57606407_57606548_57611716_57611937_57614327
transcript_33352.known	chr11	+	1004	6	FSM	ENSG00000149131.17	ENST00000531133.5	1004	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	216.239126894279	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTGCAGGATCAGGTTAG	57593323	False	NA	NA	False	NA	NA	NA	57598270	57614581	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57598322_57602034_57602170_57606009_57606214_57606407_57606548_57611716_57611937_57614327
transcript_33355.known	chr11	+	907	4	FSM	ENSG00000149131.17	ENST00000531797.5	907	4	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_2	285.899749329493	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTTTCTCTAGTTCAAG	57593285	True	NA	-42	True	NA	NA	NA	57598232	57614790	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57598322_57602034_57602170_57611716_57611937_57614327
transcript_33357.known	chr11	+	841	3	FSM	ENSG00000149131.17	ENST00000528996.2	841	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	315.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCCTTTGTTTTTTTAT	57593281	True	NA	25	True	AATAAA	-26	NA	57598228	57614857	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57598329_57611725_57611937_57614327
transcript_33359.known	chr11	+	1828	3	FSM	ENSG00000172409.7	ENST00000533682.2	1828	3	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_2	1	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTGGTATAATTTATTT	57653647	True	NA	32	True	AATAAA	-19	NA	57657761	57661865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57657861_57659454_57660083_57660764
transcript_33360.nic	chr11	+	2514	2	ISM	ENSG00000172409.7	ENST00000533682.2	1828	3	-6	2	4	-1	intron_retention	FALSE	canonical	3	192	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGTTGGTATAATTTAT	57653641	True	NA	30	True	AATAAA	-17	NA	57657755	57661863	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_57657861_57659454
transcript_33361.known	chr11	+	1634	3	FSM	ENSG00000172409.7	ENST00000302731.4	1634	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	95	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTTGGTATAATTTATT	57653648	True	NA	31	True	AATAAA	-18	NA	57657762	57661864	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57657861_57659454_57659891_57660764
transcript_33363.known	chr11	+	4443	12	FSM	ENSG00000156599.11	ENST00000287169.8	4443	12	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_2	44.3343793244322	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCGCCCCCTGACTTGTG	57667941	False	NA	11	True	AATAAA	-18	NA	57668113	57701182	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57668188_57672020_57673195_57682421_57682544_57688507_57688666_57690030_57690204_57690334_57690438_57692610_57692703_57693782_57693916_57695919_57696044_57696760_57696874_57698558_57699419_57699865
transcript_33367.known	chr11	+	2817	11	FSM	ENSG00000156599.11	ENST00000527985.5	2817	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	124.908326383792	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGATTCTATTTTTTTCCTC	57663632	False	NA	25	True	TTTAAA	-29	NA	57667746	57700363	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57668188_57682421_57682544_57688507_57688666_57690030_57690204_57690334_57690438_57692610_57692703_57693782_57693916_57695919_57696044_57696760_57696874_57698558_57699419_57699865
transcript_33373.known	chr11	-	1203	5	FSM	ENSG00000156603.20	ENST00000431606.5	1099	5	-108	4	-102	0	multi-exon	FALSE	canonical	3	455	junction_2	23.6259920426635	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTGAAGTGTGACTGCC	-57712313	False	NA	-5	True	TTTAAA	-25	NA	57712323	57703713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_57704107_57704301_57704397_57704718_57704816_57704972_57705230_57711962
transcript_33374.known	chr11	-	1259	5	FSM	ENSG00000156603.20	ENST00000645681.2	1259	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	213.151354675498	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGTGCAATTTGTCTG	-57708972	True	NA	-79	True	NA	NA	NA	57712214	57703787	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_57704107_57704301_57704636_57704718_57704816_57704972_57705230_57711962
transcript_33377.known	chr11	-	1088	3	FSM	ENSG00000156603.20	ENST00000528205.1	1088	3	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_2	24	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTGCCTCAAGTTGGAC	-57708965	True	NA	NA	False	NA	NA	NA	57712207	57704229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_57704816_57704972_57705230_57711962
transcript_33379.nnic	chr11	+	5401	20	NIC	ENSG00000198561.16	novel	6670	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_10	287.077720710841	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTAAAGTGTGTATGTG	57748907	True	NA	8	True	AATAAA	-1	NA	57761801	57818431	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_57762047_57789036_57789156_57791384_57791674_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806460_57806479_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
transcript_33382.known	chr11	+	5179	19	FSM	ENSG00000288534.1	ENST00000673781.1	5179	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	281.07033630502	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTCTCTCTTTTGTTT	57705901	True	NA	-92	True	AATAGA	-31	NA	57712581	57818257	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57712808_57737607_57737669_57789036_57789156_57791384_57791674_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
transcript_33384.known	chr11	+	1697	8	FSM	ENSG00000213593.10	ENST00000529403.1	1697	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	305.977323422798	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATTGCGCGTTTGTGTGT	57705933	True	NA	16	True	AATAAA	-18	NA	57712613	57740969	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57712808_57737607_57737669_57737835_57738027_57738353_57738431_57738663_57738771_57738973_57739040_57739130_57739261_57740098
transcript_33385.known	chr11	+	1645	8	FSM	ENSG00000213593.10	ENST00000278422.9	1645	8	0	0	0	0	multi-exon	FALSE	canonical	3	565	junction_2	144.546016964869	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCGCGTTTGTGTGTTTCT	57705912	True	NA	20	True	AATAAA	-22	NA	57712592	57740973	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57712808_57737607_57737669_57737912_57738027_57738353_57738431_57738663_57738771_57738973_57739040_57739130_57739261_57740098
transcript_33387.known	chr11	+	1521	7	FSM	ENSG00000213593.10	ENST00000378312.8	1521	7	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_2	267.958744751667	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCGCGTTTGTGTGTTTCT	57705922	True	NA	20	True	AATAAA	-22	NA	57712602	57740973	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57712808_57737607_57737669_57738353_57738431_57738663_57738771_57738973_57739040_57739130_57739261_57740098
transcript_33391.known	chr11	+	829	6	FSM	ENSG00000213593.10	ENST00000528110.5	829	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	369.854349710802	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTGATTTTAAAGAGGC	57705933	True	NA	NA	False	NA	NA	NA	57712613	57740369	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57712808_57737607_57737669_57738663_57738771_57738973_57739040_57739130_57739261_57740098
transcript_33399.known	chr11	+	663	4	FSM	ENSG00000213593.10	ENST00000530114.5	663	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	429.950643162161	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTGATTTTAAAGAGGC	57705926	True	NA	NA	False	NA	NA	NA	57712606	57740369	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57712808_57737607_57737669_57739130_57739261_57740098
transcript_33403.known	chr11	+	763	2	FSM	ENSG00000213593.10	ENST00000528042.1	763	2	0	0	0	0	multi-exon	FALSE	canonical	3	896	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGTTTACAGAGACTGTT	57705944	True	NA	NA	False	AATGAA	-23	NA	57712624	57738187	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57712808_57737607
transcript_33406.known	chr11	+	6135	19	FSM	ENSG00000198561.16	ENST00000358694.10	6135	19	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_2	213.271750370678	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	57748902	True	NA	5	True	ATTAAA	-18	NA	57761796	57819178	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57762047_57789036_57789156_57791384_57791674_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
transcript_33409.known	chr11	+	6024	19	FSM	ENSG00000198561.16	ENST00000534579.5	6024	19	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_2	232.792600960014	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	57748906	True	NA	5	True	ATTAAA	-18	NA	57761800	57819178	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57762047_57789036_57789156_57791491_57791674_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
transcript_33419.known	chr11	+	5745	18	FSM	ENSG00000198561.16	ENST00000528232.5	5745	18	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_8	282.069355136758	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	57748902	True	NA	5	True	ATTAAA	-18	NA	57761796	57819178	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57762047_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806460_57806479_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
transcript_33425.known	chr11	+	6016	18	FSM	ENSG00000198561.16	ENST00000428599.6	6016	18	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	225.627889758066	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	57748902	True	NA	5	True	ATTAAA	-18	NA	57761796	57819178	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57762047_57791384_57791674_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
transcript_33428.known	chr11	+	5727	17	FSM	ENSG00000198561.16	ENST00000529986.5	5727	17	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	175.398998268947	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	57748902	True	NA	5	True	ATTAAA	-18	NA	57761796	57819178	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57762047_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
transcript_33433.known	chr11	+	5800	17	FSM	ENSG00000198561.16	ENST00000426142.6	5800	17	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	202.186476040684	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	57748902	True	NA	5	True	ATTAAA	-18	NA	57761796	57819178	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57762120_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
transcript_33434.known	chr11	+	5749	17	FSM	ENSG00000198561.16	ENST00000532463.5	5749	17	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	208.43905546646	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	57748902	True	NA	5	True	ATTAAA	-18	NA	57761796	57819178	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57762069_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
transcript_33437.known	chr11	+	5655	16	FSM	ENSG00000198561.16	ENST00000532245.5	5655	16	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	187.802331070611	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	57748902	True	NA	5	True	ATTAAA	-18	NA	57761796	57819178	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57762047_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
transcript_33439.known	chr11	+	4984	15	FSM	ENSG00000198561.16	ENST00000525902.5	4984	15	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	327.887307980492	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	57748902	True	NA	5	True	ATTAAA	-18	NA	57761796	57819178	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57762047_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806460_57806479_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
transcript_33442.known	chr11	+	4966	14	FSM	ENSG00000198561.16	ENST00000526772.5	4966	14	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	225.037590548253	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	57748902	True	NA	5	True	ATTAAA	-18	NA	57761796	57819178	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57762047_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
transcript_33445.known	chr11	+	1192	4	FSM	ENSG00000211450.11	ENST00000534355.6	1192	4	0	0	0	0	multi-exon	FALSE	canonical	3	2543	junction_3	180.962856839617	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTGTATCTTTTTCAAC	57706537	True	NA	1	True	AGTAAA	-20	NA	57741490	57743550	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57741718_57741808_57741955_57742116_57742248_57742862
transcript_33447.known	chr11	+	469	4	FSM	ENSG00000211450.11	ENST00000528798.1	469	4	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_3	1304.13351395562	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAGTAATAGAGTAAAAC	57706728	False	NA	-6	True	AATAAA	-16	NA	57741681	57743038	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_57741718_57741808_57741955_57742116_57742228_57742862
transcript_33449.known	chr11	+	5776	11	FSM	ENSG00000186660.15	ENST00000316059.7	5776	11	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	10.3677384226262	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTTTCAGCTTATTGG	58579050	False	NA	NA	False	TATAAA	-17	NA	58579062	58621550	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_58579623_58584855_58584885_58609829_58610040_58610297_58610335_58610949_58611055_58611603_58611739_58612277_58612329_58612761_58612841_58614228_58614344_58616715_58616816_58617195
transcript_33458.known	chr11	+	1627	8	FSM	ENSG00000166840.14	ENST00000317391.8	1627	8	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	7.77226886213454	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTAATCTGTATGGATACT	58927429	True	NA	9	True	AATAAA	-17	NA	58927700	58956405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_58927830_58942539_58942585_58943542_58943667_58947045_58947166_58947857_58947966_58954769_58954897_58955175_58955354_58955609
transcript_33461.nic	chr11	+	1669	7	NIC	ENSG00000166840.14	novel	1627	8	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_6	4.06885187191123	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAATCTGTATGGATACTT	58927343	True	NA	10	True	AATAAA	-18	NA	58927614	58956406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_58927830_58943542_58943667_58947045_58947166_58947857_58947966_58954769_58954897_58955175_58955354_58955609
transcript_33466.known	chr11	+	3506	4	FSM	ENSG00000189057.11	ENST00000343597.4	3506	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	3.68178700572909	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTAGAGTATTGGAGGC	59106428	True	NA	15	True	AATAAA	-25	NA	59107236	59127412	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_59107297_59108667_59108713_59109539_59109707_59124178
transcript_33469.known	chr11	+	2364	3	FSM	ENSG00000189057.11	ENST00000529618.5	2364	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	32	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTATCAACAGGGTAAAC	59106427	True	NA	NA	False	ATTAAA	-19	NA	59107235	59126436	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_59107297_59108667_59108713_59124178
transcript_33476.known	chr11	+	2183	4	FSM	ENSG00000166801.17	ENST00000682018.1	2183	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	40.8275506109403	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCAGTCTACTGGATTT	59142819	True	NA	NA	False	NA	NA	NA	59142858	59153504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_59142947_59143082_59143305_59148835_59148954_59151749
transcript_33478.known	chr11	-	880	4	FSM	ENSG00000245571.7	ENST00000531708.1	880	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	11.0453610171873	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACACCGGCAAGGAATGGA	-59142716	True	NA	NA	False	NA	NA	NA	59143015	59135289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_59135589_59136056_59136282_59139956_59140168_59142870
transcript_33481.known	chr11	+	2221	4	FSM	ENSG00000166801.17	ENST00000529985.3	2221	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	41.0446910899164	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCAGTCTACTGGATTT	59142820	False	NA	NA	False	NA	NA	NA	59142859	59153504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_59142947_59143082_59143305_59148796_59148954_59151749
transcript_33485.known	chr11	+	3592	4	FSM	ENSG00000166801.17	ENST00000361723.7	3592	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	26.0426999794995	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGTATTTGTCAGCCTC	59143518	True	NA	31	True	ATTAAA	-15	NA	59144778	59155036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_59144897_59145826_59145857_59148796_59148954_59151749
transcript_33487.known	chr11	+	6003	9	FSM	ENSG00000110042.8	ENST00000227451.4	6003	9	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_8	9.15150260886156	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTCACCCAAATCTGT	59171440	True	NA	8	True	AATAAA	-18	NA	59172131	59208588	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_59172807_59181738_59182463_59188734_59188797_59189161_59189324_59191113_59191176_59192097_59192251_59195207_59195370_59199683_59199774_59204675
transcript_33490.nnic	chr11	-	4337	20	NNC	ENSG00000166889.14	novel	4129	19	NA	NA	-134	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_14	26.1071731050037	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCCTGCATTTCTACT	-59667185	True	NA	-2	True	AATAAA	-22	NA	59669171	59636715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_59638412_59639047_59639198_59639291_59639384_59642879_59643036_59647753_59647914_59649461_59649611_59650753_59650814_59651543_59651642_59652463_59652588_59652837_59653019_59653982_59654073_59655522_59655741_59655955_59656046_59656498_59656601_59657079_59657154_59657529_59657725_59658865_59658947_59659251_59659470_59666852_59666965_59668880
transcript_33493.known	chr11	-	4129	19	FSM	ENSG00000166889.14	ENST00000300146.10	4129	19	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_5	10.6985922692292	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCCTGCATTTCTACT	-59667051	True	NA	-2	True	AATAAA	-22	NA	59669037	59636715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_59638412_59639047_59639198_59639291_59639384_59642879_59643036_59647753_59647914_59649461_59649611_59650753_59650814_59651543_59651642_59652463_59652588_59652837_59653019_59653982_59654073_59655522_59655741_59655955_59656046_59656498_59656601_59657529_59657725_59658865_59658947_59659251_59659470_59666852_59666965_59668880
transcript_33496.nnic	chr11	-	4173	18	NIC	ENSG00000166889.14	novel	4129	19	NA	NA	-134	0	combination_of_known_splicesites	FALSE	canonical	2	14	junction_12	19.8915746104834	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCCTGCATTTCTACT	-59667185	True	NA	-2	True	AATAAA	-22	NA	59669171	59636715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_59638412_59639047_59639198_59639291_59639384_59642879_59643036_59647753_59647914_59649461_59649611_59650753_59650814_59651543_59651642_59652463_59652588_59652837_59653019_59653982_59654073_59655522_59655741_59656498_59656601_59657529_59657725_59658865_59658947_59659251_59659470_59666852_59666965_59668880
transcript_33506.known	chr11	-	4713	14	FSM	ENSG00000110048.12	ENST00000263847.6	4713	14	0	0	0	0	multi-exon	TRUE	canonical	3	353	junction_3	45.8364729066353	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTTGTCTGATTCACT	-59611052	True	NA	-1	True	ATTAAA	-18	NA	59615774	59574397	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_59576720_59576804_59577026_59578148_59578331_59580173_59580270_59581450_59581555_59593603_59593725_59594009_59594256_59600495_59600628_59600818_59600874_59601282_59601386_59601639_59601839_59608483_59608735_59610380_59610590_59615302
transcript_33510.nic	chr11	-	1801	12	ISM	ENSG00000166889.14	ENST00000300146.10	4129	19	-134	14827	-134	-8869	5prime_fragment	FALSE	canonical	3	73	junction_3	6.00550711451409	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGTCAACACAATTGTC	-59667185	True	NA	-1	True	NA	NA	NA	59669171	59651542	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_59651642_59652463_59652588_59652837_59653019_59653982_59654073_59655522_59655741_59655955_59656046_59656498_59656601_59657529_59657725_59658865_59658947_59659251_59659470_59666852_59666965_59668880
transcript_33516.known	chr11	+	6154	11	FSM	ENSG00000166900.17	ENST00000337979.9	6154	11	0	0	0	0	multi-exon	FALSE	canonical	3	401	junction_10	63.7574309394599	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGTACTGTTGTTTTTT	59748580	True	NA	5	True	AATAAA	-16	NA	59755375	59805878	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_59755636_59773210_59773295_59787036_59787137_59788872_59788948_59790518_59790587_59792106_59792216_59793098_59793173_59793379_59793515_59795371_59795483_59797282_59797397_59800854
transcript_33522.known	chr11	+	1571	10	FSM	ENSG00000166900.17	ENST00000529177.5	1571	10	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_9	146.98257224314	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAAGGAGGGACCAGGATG	59748656	True	NA	NA	False	NA	NA	NA	59755451	59801485	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_59755636_59773210_59773295_59787036_59787137_59788872_59788948_59790518_59790587_59792106_59792216_59793098_59793173_59793379_59793515_59795371_59795483_59800854
transcript_33524.nic	chr11	+	2902	10	NIC	ENSG00000166900.17	novel	6154	11	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_8	156.014560890567	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGCTCTGTCTCGATG	59748551	True	NA	25	True	AATAAA	-27	NA	59755346	59802708	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_59755636_59773210_59773295_59787036_59787137_59788872_59788948_59790518_59790587_59792106_59792216_59793098_59793173_59793379_59793515_59797282_59797397_59800854
transcript_33528.nic	chr11	+	2923	10	NIC	ENSG00000166900.17	novel	6154	11	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_2	155.815972493036	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGCTCTGTCTCGATG	59748541	True	NA	25	True	AATAAA	-27	NA	59755336	59802708	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_59755636_59773210_59773295_59788872_59788948_59790518_59790587_59792106_59792216_59793098_59793173_59793379_59793515_59795371_59795483_59797282_59797397_59800854
transcript_33536.known	chr11	+	690	4	FSM	ENSG00000166900.17	ENST00000530498.1	690	4	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_2	57.1392062325763	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTAGTTTTGTGACTTG	59748663	True	NA	6	True	ATTAAA	-16	NA	59755458	59789201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_59755636_59773210_59773295_59787036_59787137_59788872
transcript_33543.known	chr11	-	1083	4	FSM	ENSG00000166902.5	ENST00000300151.5	1083	4	0	0	0	0	multi-exon	FALSE	canonical	3	1277	junction_1	30.825674724525	295	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAACTTCTCATTGGTCAT	-59801363	True	NA	-5	True	AATAAA	-21	NA	59810778	59806139	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_59806833_59807700_59807850_59809854_59809921_59810603
transcript_33546.known	chr11	+	1851	4	FSM	ENSG00000110104.13	ENST00000227520.10	1851	4	0	0	0	0	multi-exon	FALSE	canonical	3	569	junction_2	20.704266871026	371	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACGTGTCCAATGGGGGAA	60835644	True	NA	18	True	AATAAA	-14	NA	60842112	60851081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_60842883_60847923_60848054_60849939_60850015_60850205
transcript_33549.known	chr11	-	2337	16	FSM	ENSG00000110107.9	ENST00000227524.9	2337	16	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_12	13.2222035480727	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCATGTCCCTGCGGTT	-60892475	True	NA	39	True	AATAAA	-20	NA	60906585	60890546	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_60891264_60897845_60897952_60898100_60898272_60898540_60898627_60898861_60898932_60899148_60899305_60900581_60900692_60900853_60900930_60901294_60901370_60901498_60901541_60902402_60902466_60902582_60902657_60902739_60902882_60903458_60903536_60903711_60903862_60906363
transcript_33577.known	chr11	+	3480	11	FSM	ENSG00000006118.15	ENST00000005286.8	3480	11	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_5	39.7795173424716	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGACTGCTGCCGTCTG	60923142	True	NA	18	True	AATAAA	-18	NA	60924480	60937159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_60924734_60927203_60927419_60927640_60927860_60928628_60928961_60930509_60930660_60931685_60931885_60931983_60932128_60933541_60933745_60934487_60934765_60935251_60935444_60935863
transcript_33580.known	chr11	+	3498	11	FSM	ENSG00000006118.15	ENST00000453848.7	3498	11	0	0	0	0	multi-exon	TRUE	canonical	3	88	junction_5	42.8368999812078	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGACTGCTGCCGTCTG	60923121	True	NA	18	True	AATAAA	-18	NA	60924459	60937159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_60924734_60927203_60927419_60927640_60927860_60928628_60928961_60930509_60930660_60931688_60931885_60931983_60932128_60933541_60933745_60934487_60934765_60935251_60935444_60935863
transcript_33582.nic	chr11	+	3311	11	NIC	ENSG00000006118.15	novel	3498	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	20	junction_1	64.6887934653291	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGACTGCTGCCGTCTG	60923121	True	NA	18	True	AATAAA	-18	NA	60924459	60937159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_60924544_60927203_60927419_60927640_60927860_60928628_60928961_60930509_60930660_60931685_60931885_60931983_60932128_60933541_60933745_60934487_60934765_60935251_60935444_60935863
transcript_33583.nic	chr11	+	3308	11	NIC	ENSG00000006118.15	novel	3498	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	20	junction_1	66.3642222888207	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGACTGCTGCCGTCTG	60923121	True	NA	18	True	AATAAA	-18	NA	60924459	60937159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_60924544_60927203_60927419_60927640_60927860_60928628_60928961_60930509_60930660_60931688_60931885_60931983_60932128_60933541_60933745_60934487_60934765_60935251_60935444_60935863
transcript_33597.known	chr11	-	1873	9	FSM	ENSG00000110446.12	ENST00000538739.2	1873	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	19.8269860291472	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGGGGGCCTGGATGGG	NA	False	NA	23	True	NA	NA	NA	60952653	60937059	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_60937374_60937869_60938026_60939479_60939639_60941121_60941291_60942034_60942146_60943688_60943837_60946531_60946822_60950993_60951367_60952500
transcript_33602.known	chr11	-	2500	8	FSM	ENSG00000110446.12	ENST00000679573.1	2500	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	21.1823954630023	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGTCCATGACAAGGGG	-60952130	False	NA	-1	True	CATAAA	-27	NA	60952176	60937083	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_60937374_60937869_60938026_60939479_60939639_60941121_60941291_60942034_60942140_60943688_60943837_60946531_60946822_60950993
transcript_33606.known	chr11	-	1807	7	FSM	ENSG00000110446.12	ENST00000541505.5	1807	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	18.4541473808885	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGTCCATGACAAGGGG	-60951515	True	NA	-1	True	CATAAA	-27	NA	60951646	60937083	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_60937374_60937869_60938026_60939479_60939639_60942034_60942146_60943688_60943837_60946531_60946822_60950993
transcript_33611.known	chr11	+	2129	4	FSM	ENSG00000110108.10	ENST00000227525.8	2129	4	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_2	13.735598518691	536	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGATTGCTTCCATGTC	60912366	True	NA	23	True	AATAAA	-16	NA	60914157	60923443	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_60914269_60919685_60919931_60920885_60920989_60921773
transcript_33621.known	chr11	-	506	5	FSM	ENSG00000167987.11	ENST00000538036.1	506	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	74.6705263139346	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCGTGGAAAAGCTCCAGGA	-61161070	False	1100	NA	False	NA	NA	NA	61161136	61132443	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61132540_61133254_61133338_61134035_61134208_61138736_61138836_61161080
transcript_33622.known	chr11	-	2673	5	FSM	ENSG00000167987.11	ENST00000301765.10	2673	5	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_4	20.3100960115899	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTGGTGTTGCTGGG	-61160326	True	NA	-5	True	AATAAA	-16	NA	61161426	61130256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61132540_61133254_61133338_61134035_61134208_61138736_61138836_61161390
transcript_33623.nnic	chr11	-	2742	5	NNC	ENSG00000167987.11	novel	2673	5	NA	NA	-62	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_4	72.5499827705011	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTGGTGTTGCTGGG	-61160628	True	NA	-5	True	AATAAA	-16	NA	61161677	61130256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_61132540_61133254_61133338_61134035_61134208_61138736_61138836_61161572
transcript_33629.known	chr11	-	915	4	FSM	ENSG00000167987.11	ENST00000536000.1	915	4	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_3	22.9830855679176	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGACAGTCCTCGCCTTCA	-61161387	False	NA	NA	False	NA	NA	NA	61161453	61132756	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61133338_61134035_61134208_61138736_61138836_61161390
transcript_33632.known	chr11	+	1384	9	FSM	ENSG00000229183.10	ENST00000378149.9	1384	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	3.40725329260975	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTTTTGTGGAGCTGCTT	NA	False	NA	NA	False	AATAAA	-18	NA	61222346	61231694	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61222457_61222942_61223106_61225338_61225457_61226325_61226445_61227119_61227320_61228670_61228788_61229918_61230064_61230165_61230265_61231381
transcript_33633.known	chr11	+	1382	9	FSM	ENSG00000256713.8	ENST00000312403.10	1382	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	2.98956518577535	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTTTTGTGGAGCTGCTT	NA	False	NA	NA	False	AATAAA	-18	NA	61241174	61251444	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61241283_61241768_61241932_61244164_61244283_61245151_61245271_61245945_61246146_61248418_61248536_61249668_61249814_61249915_61250015_61251131
transcript_33638.known	chr11	-	3536	20	FSM	ENSG00000167992.14	ENST00000335613.10	3536	20	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	13.4646351191544	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCACTGCTCATTCACC	-61294860	True	NA	-5	True	ATTAAA	-20	NA	61295316	61258285	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61259313_61264486_61264578_61264955_61265039_61265121_61265213_61267461_61267545_61268921_61269019_61271674_61271761_61273198_61273317_61274498_61274585_61276592_61276681_61278393_61278477_61280623_61280718_61280792_61281236_61281785_61281915_61282788_61282906_61286313_61286431_61290798_61290928_61291263_61291354_61291481_61291577_61294927
transcript_33640.nnic	chr11	-	3534	20	NNC	ENSG00000167992.14	novel	3536	20	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_6	15.4769062166436	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCACTGCTCATTCACC	-61294878	True	NA	-5	True	ATTAAA	-20	NA	61295334	61258285	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_61259313_61264486_61264578_61264955_61265039_61265121_61265213_61267461_61267545_61268921_61269019_61271694_61271761_61273198_61273317_61274498_61274585_61276592_61276681_61278393_61278477_61280623_61280718_61280792_61281236_61281785_61281915_61282788_61282906_61286313_61286431_61290798_61290928_61291263_61291354_61291481_61291577_61294927
transcript_33644.nnic	chr11	-	3469	19	NIC	ENSG00000167992.14	novel	3536	20	NA	NA	-28	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_18	17.5186849103366	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCACTGCTCATTCACC	-61294888	True	NA	-5	True	ATTAAA	-20	NA	61295344	61258285	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_61259313_61264486_61264578_61264955_61265039_61265121_61265213_61267461_61267545_61268921_61269019_61271674_61271761_61273198_61273317_61274498_61274585_61276592_61276681_61278393_61278477_61280623_61280718_61280792_61281236_61281785_61281915_61282788_61282906_61286313_61286431_61290798_61290928_61291263_61291354_61294927
transcript_3365.nnic	chr1	-	504	4	NNC	ENSG00000283773.1	novel	166	2	NA	NA	-1565	7736	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_3	12.684198393627	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTAAGTAGCCTTTCAA	-16642291	True	NA	NA	False	AAAAAG	-20	NA	16644674	16635030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_16635169_16642766_16642851_16643027_16643146_16644510
transcript_33656.nnic	chr11	-	3374	18	NIC	ENSG00000167992.14	novel	3536	20	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_4	15.4999720950748	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCACTGCTCATTCACC	-61294878	True	NA	-5	True	ATTAAA	-20	NA	61295334	61258285	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_61259313_61264486_61264578_61264955_61265039_61265121_61265213_61271674_61271761_61273198_61273317_61274498_61274585_61276592_61276681_61278393_61278477_61280623_61280718_61280792_61281236_61281785_61281915_61282788_61282906_61286313_61286431_61290798_61290928_61291263_61291354_61291481_61291577_61294927
transcript_33678.nic	chr11	-	2452	14	ISM	ENSG00000167992.14	ENST00000335613.10	3536	20	-18	13019	-18	-140	5prime_fragment	FALSE	canonical	3	45	junction_8	9.2748945351984	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGGTGGTAGGTGCCTGT	-61294878	True	NA	NA	False	AATACA	-14	NA	61295334	61271304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_61271761_61273198_61273317_61274498_61274585_61276592_61276681_61278393_61278477_61280623_61280718_61280792_61281236_61281785_61281915_61282788_61282906_61286313_61286431_61290798_61290928_61291263_61291354_61291481_61291577_61294927
transcript_33690.known	chr11	-	4426	28	FSM	ENSG00000167986.15	ENST00000680367.1	4426	28	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_27	357.056626940671	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGTACATTTGTTTTTG	-61333602	True	NA	NA	False	AATAAA	-15	NA	61333807	61299454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61300220_61300808_61300933_61302256_61302360_61302581_61302752_61303045_61303156_61303864_61304036_61308982_61309078_61309795_61309961_61310294_61310419_61311783_61311896_61311988_61312085_61313498_61313707_61313861_61313970_61314046_61314211_61314307_61314487_61316284_61316394_61316491_61316568_61321594_61321698_61322295_61322413_61323010_61323095_61323978_61324138_61325610_61325709_61326778_61326894_61329362_61329585_61329957_61330075_61331542_61331692_61332907_61333009_61333525
transcript_33691.known	chr11	-	4348	28	FSM	ENSG00000167986.15	ENST00000681803.1	4348	28	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_27	357.056626940671	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGTACATTTGTTTTTG	-61333602	True	NA	NA	False	AATAAA	-15	NA	61333807	61299454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61300220_61300808_61300933_61302256_61302360_61302581_61302752_61303045_61303156_61303864_61304036_61308982_61309078_61309795_61309961_61310294_61310419_61311783_61311896_61311988_61312085_61313498_61313707_61313861_61313970_61314046_61314211_61314307_61314487_61316284_61316394_61316491_61316568_61321594_61321698_61322295_61322413_61323010_61323095_61323978_61324138_61325610_61325709_61326778_61326894_61329362_61329585_61329957_61330075_61331542_61331692_61332907_61333009_61333603
transcript_337.known	chr1	-	2757	19	FSM	ENSG00000188976.11	ENST00000327044.7	2757	19	0	0	0	0	multi-exon	TRUE	canonical	3	1103	junction_1	245.869658333209	4357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGCTCCTGGAGATTT	-940507	True	NA	-14	True	AATAAA	-29	NA	959256	944202	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_944801_945056_945147_945517_945654_946172_946287_946401_946546_948130_948233_948489_948604_951126_951239_951999_952140_952411_952601_953174_953289_953781_953893_954003_954083_955922_956014_956094_956216_956893_957026_957098_957274_958928_959082_959214
transcript_33704.known	chr11	-	4245	27	FSM	ENSG00000167986.15	ENST00000301764.12	4245	27	0	0	0	0	multi-exon	TRUE	canonical	3	1480	junction_18	155.297238380213	1795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACATTTGTTTTTGCTTT	-61313039	True	NA	NA	False	AATAAA	-19	NA	61333105	61299450	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61300220_61300808_61300933_61302256_61302360_61302581_61302752_61303045_61303156_61303864_61304036_61308982_61309078_61309795_61309961_61310294_61310419_61311783_61311896_61311988_61312085_61313498_61313707_61313861_61313970_61314046_61314211_61314307_61314487_61316284_61316394_61316491_61316568_61321594_61321698_61322295_61322413_61323010_61323095_61323978_61324138_61325610_61325709_61326778_61326894_61329362_61329585_61329957_61330075_61331542_61331692_61332907
transcript_33720.known	chr11	-	4335	26	FSM	ENSG00000167986.15	ENST00000680881.1	4335	26	0	0	0	0	multi-exon	FALSE	canonical	3	1480	junction_17	155.540471903617	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAGAAGAAAGGTACATT	-61313044	True	NA	NA	False	AATAAA	-7	NA	61333110	61299462	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61300220_61300808_61300933_61302256_61302360_61302581_61302752_61303045_61303156_61303864_61304036_61308982_61309078_61309795_61309961_61310294_61310419_61311783_61311896_61311988_61312085_61313498_61313707_61313861_61313970_61314046_61314487_61316284_61316394_61316491_61316568_61321594_61321698_61322295_61322413_61323010_61323095_61323978_61324138_61325610_61325709_61326778_61326894_61329362_61329585_61329957_61330075_61331542_61331692_61332907
transcript_33725.known	chr11	-	4459	26	FSM	ENSG00000167986.15	ENST00000680250.1	4459	26	0	0	0	0	multi-exon	FALSE	canonical	3	1480	junction_17	151.504265286493	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATAAGAAGAAAGGTACAT	-61313044	True	NA	NA	False	AATAAA	-6	NA	61333110	61299463	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61300220_61300808_61300933_61302256_61302752_61303045_61303156_61303864_61304036_61308982_61309078_61309795_61309961_61310294_61310419_61311783_61311896_61311988_61312085_61313498_61313707_61313861_61313970_61314046_61314211_61314307_61314487_61316284_61316394_61316491_61316568_61321594_61321698_61322295_61322413_61323010_61323095_61323978_61324138_61325610_61325709_61326778_61326894_61329362_61329585_61329957_61330075_61331542_61331692_61332907
transcript_33727.known	chr11	-	3937	25	FSM	ENSG00000167986.15	ENST00000680717.1	3937	25	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_23	358.90466081615	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGTACATTTGTTTTTG	-61313074	True	NA	NA	False	AATAAA	-15	NA	61333140	61299454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61300220_61300808_61300933_61302256_61302360_61302581_61302752_61303045_61303156_61303864_61304036_61308982_61309078_61309795_61309961_61310294_61310419_61311783_61311896_61311988_61312085_61313498_61313707_61313861_61313970_61314046_61314211_61314307_61314487_61316284_61316394_61316491_61316568_61321594_61321698_61322295_61322413_61323010_61323095_61323978_61324138_61325610_61325709_61326778_61326894_61331542_61331692_61332907
transcript_33729.known	chr11	-	4033	25	FSM	ENSG00000167986.15	ENST00000679712.1	4033	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	376.997117215621	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGTACATTTGTTTTTG	-61313044	True	NA	NA	False	AATAAA	-15	NA	61333110	61299454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61300220_61300808_61300933_61302256_61302360_61302581_61302752_61303045_61303156_61303864_61304036_61308982_61309078_61309795_61309961_61310294_61310419_61311783_61311896_61311988_61312085_61313498_61313707_61313861_61313970_61314046_61314211_61314307_61314487_61316284_61316394_61316491_61316568_61321594_61321698_61322295_61322413_61323010_61323095_61323978_61324138_61329362_61329585_61329957_61330075_61331542_61331692_61332907
transcript_33754.nic	chr11	+	2446	19	NIC	ENSG00000149476.16	novel	4678	18	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	54.4446712013418	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTAATAAACTATAATACAT	61331878	True	NA	NA	False	AAAAAG	-4	NA	61333209	61346890	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_61333330_61333548_61333651_61334619_61334732_61337940_61338131_61339065_61339177_61339253_61339436_61341435_61341515_61341822_61341913_61342460_61342496_61342573_61342659_61342754_61342845_61343341_61343459_61343855_61343976_61344135_61344274_61345259_61345367_61345461_61345566_61345711_61345746_61345856_61345947_61346350
transcript_33765.known	chr11	+	4678	18	FSM	ENSG00000149476.16	ENST00000394900.8	4678	18	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	23.474347332758	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTGGGCCAGGCAAGCAG	61331896	True	NA	NA	False	NA	NA	NA	61333227	61349242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61333330_61334619_61334732_61337940_61338131_61339065_61339177_61339253_61339436_61341435_61341515_61341822_61341913_61342460_61342496_61342573_61342659_61342754_61342845_61343341_61343459_61343855_61343976_61344135_61344274_61345259_61345367_61345461_61345566_61345711_61345746_61345856_61345947_61346350
transcript_338.known	chr1	-	878	2	FSM	ENSG00000188976.11	ENST00000469563.1	878	2	0	0	0	0	multi-exon	FALSE	canonical	3	1652	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATACAAAAATTAGCCTGGC	-940507	True	NA	NA	False	AAAAAG	-20	NA	959256	958245	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_959082_959214
transcript_33808.known	chr11	-	3205	8	FSM	ENSG00000162144.10	ENST00000426130.6	3205	8	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_6	65.4270118341883	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAACAAGTGTTTATTTC	-61361493	True	NA	49	True	AATATA	-17	NA	61362283	61348753	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61350423_61350990_61351148_61352984_61353140_61353783_61353993_61356529_61356729_61357202_61357372_61357732_61357829_61361732
transcript_33815.known	chr11	-	1803	7	FSM	ENSG00000162144.10	ENST00000447532.6	1803	7	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	29.9666481275434	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCGAGTTTCATTAAATAT	-61361900	False	NA	-35	True	NA	NA	NA	61361913	61348837	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61349644_61350990_61351148_61352984_61353140_61353783_61353993_61356529_61356729_61357732_61357829_61361732
transcript_33819.known	chr11	-	2584	7	FSM	ENSG00000162144.10	ENST00000294072.9	2584	7	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	37.9809893967437	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCTTTGTTCAGGCTGC	-61361035	True	NA	-2	True	ATTAAA	-17	NA	61361882	61348804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61350423_61350990_61351148_61352984_61353140_61353783_61353993_61356529_61356729_61357732_61357829_61361732
transcript_33834.nic	chr11	+	1470	6	FSM	ENSG00000149483.13	ENST00000688279.1	1073	6	-397	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	66.6861304920296	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGGAGTCTGTCTGTCTA	61361583	True	NA	NA	False	AATAAA	-21	NA	61361963	61369211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61362421_61364251_61364316_61364432_61364519_61366044_61366217_61367922_61367999_61368596
transcript_33839.known	chr11	+	1475	5	FSM	ENSG00000149483.13	ENST00000278826.11	1475	5	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_4	23.7907545067406	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAAATTCTTATGTCC	61359804	True	NA	23	True	AATAAA	-33	NA	61362373	61369509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61362421_61364251_61364519_61366044_61366217_61367922_61367999_61368596
transcript_3384.known	chr1	-	3184	8	FSM	ENSG00000186715.11	ENST00000455405.6	3184	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	8.9259996296076	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTTTCTTGTTTGGATG	-16758842	False	NA	NA	False	AATAAA	-15	NA	16758872	16754909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_16757394_16757517_16757658_16757753_16757861_16757941_16758089_16758215_16758294_16758465_16758587_16758674_16758712_16758802
transcript_33843.known	chr11	+	1134	4	FSM	ENSG00000149483.13	ENST00000692785.1	1932	4	234	564	1	-168	multi-exon	FALSE	canonical	3	193	junction_3	13.3666251038423	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTCCCCACAGCAGCAGT	61359817	True	NA	NA	False	NA	NA	NA	61362386	61368583	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61362421_61364251_61364519_61366044_61366217_61367922
transcript_33845.known	chr11	+	2068	4	FSM	ENSG00000149483.13	ENST00000423772.6	2068	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	80.6032808816669	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGAGAGTTGGCCCTATGC	61362650	False	NA	NA	False	NA	NA	NA	61362668	61368769	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61364316_61366044_61366217_61367922_61367999_61368596
transcript_33846.known	chr11	+	2839	3	FSM	ENSG00000149483.13	ENST00000542946.2	3875	3	397	639	0	-195	multi-exon	FALSE	canonical	3	215	junction_1	5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCACCCCTGAGGCTTCT	61359791	True	NA	NA	False	NA	NA	NA	61362360	61368556	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61362421_61364251_61364519_61366044
transcript_33848.known	chr11	+	611	2	ISM	ENSG00000149483.13	ENST00000534963.5	740	4	17	1755	0	-1755	intron_retention	FALSE	canonical	3	215	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATTGCTTAAGCCCAGG	61359791	True	NA	NA	False	NA	NA	NA	61362360	61364802	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_61362421_61364251
transcript_33851.known	chr11	+	1306	5	FSM	ENSG00000187049.11	ENST00000334888.10	1062	5	-227	-17	-33	-3	multi-exon	FALSE	non_canonical	0	0	junction_4	161.185452197151	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTATGGCACCTGTCCCTA	NA	False	NA	34	True	AATAAA	-34	NA	61392359	61398863	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61392666_61393230_61393333_61393883_61393977_61397773_61397976_61398260
transcript_33852.nic	chr11	+	1302	5	NIC	ENSG00000187049.11	novel	1090	5	NA	NA	31	-3	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_4	154.937084005089	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTATGGCACCTGTCCCTA	61392350	True	NA	34	True	AATAAA	-34	NA	61392423	61398863	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_61392680_61393230_61393333_61393883_61393977_61397727_61397976_61398260
transcript_33853.nic	chr11	+	1104	5	NIC	ENSG00000187049.11	novel	1062	5	NA	NA	-11	-3	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_4	153.846311297996	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTATGGCACCTGTCCCTA	61392564	False	NA	34	True	AATAAA	-34	NA	61392575	61398863	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_61392680_61393230_61393333_61393883_61393977_61397773_61397976_61398260
transcript_33871.nic	chr11	-	3441	11	NIC	ENSG00000149532.16	novel	3650	10	NA	NA	8	0	combination_of_known_junctions	TRUE	canonical	3	32	junction_5	131.391932781278	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGCATTGAATAGATTT	-61423006	True	NA	63	True	AATAAA	-23	NA	61430023	61402648	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_61404705_61410937_61411106_61411768_61411938_61415665_61415785_61416104_61416163_61416363_61416520_61419921_61420095_61420469_61420574_61421389_61421609_61429181_61429291_61429913
transcript_33872.nic	chr11	-	3414	11	NIC	ENSG00000149532.16	novel	3650	10	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_5	123.753020165166	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGCATTGAATAGATTT	-61423006	True	NA	63	True	AATAAA	-23	NA	61430023	61402648	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_61404705_61410937_61411106_61411768_61411938_61415665_61415785_61416104_61416163_61416363_61416520_61419948_61420095_61420469_61420574_61421389_61421609_61429181_61429291_61429913
transcript_33877.nic	chr11	-	3361	11	NIC	ENSG00000149532.16	novel	3650	10	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_5	131.391932781278	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTATACTGCATTGTAT	-61423006	True	NA	-17	True	AATAAA	-18	NA	61430023	61402728	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_61404705_61410937_61411106_61411768_61411938_61415665_61415785_61416104_61416163_61416363_61416520_61419921_61420095_61420469_61420574_61421389_61421609_61429181_61429291_61429913
transcript_33878.nic	chr11	-	3334	11	NIC	ENSG00000149532.16	novel	3487	10	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_5	123.753020165166	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTATACTGCATTGTAT	-61423006	True	NA	-17	True	AATAAA	-18	NA	61430023	61402728	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_61404705_61410937_61411106_61411768_61411938_61415665_61415785_61416104_61416163_61416363_61416520_61419948_61420095_61420469_61420574_61421389_61421609_61429181_61429291_61429913
transcript_33880.nnic	chr11	-	3286	11	NNC	ENSG00000149532.16	novel	3487	10	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	131.505171000991	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTATACTGCATTGTAT	-61423006	True	NA	-17	True	AATAAA	-18	NA	61430023	61402728	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_61404705_61410937_61411106_61411768_61411938_61415665_61415785_61416104_61416163_61416411_61416520_61419948_61420095_61420469_61420574_61421389_61421609_61429181_61429291_61429913
transcript_33886.known	chr11	-	3650	10	FSM	ENSG00000149532.16	ENST00000394888.8	3650	10	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_5	85.7230683331181	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGCATTGAATAGATTT	NA	False	NA	63	True	AATAAA	-23	NA	61430031	61402648	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61404705_61410937_61411106_61411768_61411938_61415665_61415785_61416104_61416520_61419921_61420095_61420469_61420574_61421389_61421609_61429181_61429291_61429913
transcript_33887.known	chr11	-	3487	10	FSM	ENSG00000149532.16	ENST00000439958.8	3487	10	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_5	68.3017994087208	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTATACTGCATTGTAT	-61422958	True	NA	-17	True	AATAAA	-18	NA	61429975	61402728	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61404705_61410937_61411106_61411768_61411938_61415665_61415785_61416104_61416520_61419948_61420095_61420469_61420574_61421389_61421609_61429181_61429291_61429913
transcript_33898.known	chr11	+	555	5	FSM	ENSG00000167985.7	ENST00000359614.9	555	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	261.916494325959	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAAACAAAGAGCAGAG	61419051	True	NA	NA	False	AATGAA	-31	NA	61430124	61446005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61430183_61437624_61437849_61438003_61438114_61438244_61438343_61445940
transcript_33904.nnic	chr11	+	1304	5	NNC	ENSG00000256591.5	novel	580	5	NA	NA	-5	4815	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	252.480692331117	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGTGTATGTGTGTGTGT	61418977	True	NA	17	True	AATAAA	-17	NA	61430050	61473531	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_61430183_61437624_61437849_61438003_61438114_61468663_61468715_61472744
transcript_33906.known	chr11	+	1077	5	FSM	ENSG00000167985.7	ENST00000542794.5	1077	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	245.297141238947	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTCTGCCACGAGAGGG	61418968	True	NA	110	True	NA	NA	NA	61430041	61446342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61430183_61436760_61436961_61437624_61437849_61438003_61438114_61445940
transcript_33909.known	chr11	+	1186	4	FSM	ENSG00000167985.7	ENST00000301761.7	1186	4	0	0	0	0	multi-exon	FALSE	canonical	3	460	junction_3	47.377913278939	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACAATTTCCCAGCCCTC	61419050	True	NA	18	True	ATTAAA	-20	NA	61430123	61446733	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61430183_61437624_61437849_61438003_61438114_61445940
transcript_33910.nnic	chr11	+	1199	4	NNC	ENSG00000256591.5	novel	449	4	NA	NA	-9	4822	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_3	232.19866972535	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTGTGTGCACATT	61419038	True	NA	24	True	AATAAA	-24	NA	61430111	61473538	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_61430183_61437624_61437849_61438003_61438114_61472744
transcript_33916.known	chr11	+	835	2	FSM	ENSG00000167985.7	ENST00000542074.1	835	2	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAGAATTATTAAAGCA	61419031	True	NA	-18	True	TTTAAA	-19	NA	61430104	61446697	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61430183_61445940
transcript_33918.known	chr11	-	1621	11	FSM	ENSG00000011347.10	ENST00000535826.5	1621	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	20.6400096899202	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGGCCAAGGGAGGCCCA	-61580741	False	NA	NA	False	NA	NA	NA	61580872	61518626	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61518732_61523074_61523275_61523826_61523942_61524362_61524533_61527914_61528186_61532988_61533125_61546030_61546256_61547176_61547309_61551383_61551464_61556103_61556208_61580789
transcript_33920.known	chr11	-	2013	10	FSM	ENSG00000011347.10	ENST00000540677.5	2013	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	24.6551524677881	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCGTGGGGACAGAGGCCT	-61580695	False	NA	23	True	NA	NA	NA	61580826	61518056	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61518732_61523074_61523275_61523826_61523942_61524362_61524533_61527914_61528186_61532988_61533125_61546030_61546256_61551383_61551464_61556103_61556208_61580789
transcript_33921.known	chr11	-	4854	9	FSM	ENSG00000011347.10	ENST00000263846.8	4854	9	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_6	10.5356537528527	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCCTTGGCTGTTTCCTCC	-61580403	True	NA	-2	True	AATAAA	-17	NA	61581148	61515312	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61518732_61523074_61523275_61523826_61523942_61524362_61524533_61527914_61528186_61532988_61533125_61551383_61551464_61556103_61556208_61580789
transcript_33932.known	chr11	-	1692	4	FSM	ENSG00000134825.16	ENST00000543510.1	1692	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	4190.79867752623	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCTGTCTGGGGCCCATT	-61792788	False	NA	-5	True	AATAAA	-15	NA	61792802	61789130	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61789236_61789784_61789922_61790492_61790603_61791462
transcript_33933.known	chr11	-	578	4	FSM	ENSG00000134825.16	ENST00000537328.6	578	4	0	0	0	0	multi-exon	FALSE	canonical	3	5881	junction_3	1484.71164428204	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGTCTGGGCCTACCCTT	-61769027	True	NA	NA	False	NA	NA	NA	61792599	61788948	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61789236_61789784_61789922_61790492_61790603_61792555
transcript_33934.known	chr11	-	579	4	FSM	ENSG00000134825.16	ENST00000545210.5	579	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	3434.3198259141	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTCTGGGGCCCATTC	-61769022	True	NA	-4	True	AATAAA	-16	NA	61792594	61789129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61789236_61789784_61789991_61790374_61790603_61792555
transcript_33935.known	chr11	-	517	4	FSM	ENSG00000134825.16	ENST00000541893.5	517	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	3449.25798783835	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTCTGGGGCCCATTC	-61769008	True	NA	-4	True	AATAAA	-16	NA	61792580	61789129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61789236_61789784_61789991_61790422_61790603_61792555
transcript_33936.known	chr11	-	395	3	FSM	ENSG00000134825.16	ENST00000535297.1	395	3	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	2860	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTCTGGGGCCCATTC	-61769044	True	NA	-4	True	AATAAA	-16	NA	61792616	61789129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61789236_61790374_61790603_61792555
transcript_33939.known	chr11	+	1392	2	FSM	ENSG00000124920.14	ENST00000537766.1	1392	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGGGCAAATGTAGGGG	61752341	True	NA	NA	False	NA	NA	NA	61752641	61766867	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61752791_61765624
transcript_3396.nic	chr1	-	2460	6	NIC	ENSG00000186715.11	novel	2185	17	NA	NA	-776	0	intron_retention	FALSE	canonical	3	11	junction_4	6.54217089351845	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTTCACCAAGGACTTTC	NA	False	NA	-13	True	AATAAA	-14	NA	16760067	16757127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_16757394_16757517_16757658_16757753_16757861_16757941_16758587_16758674_16758712_16758802
transcript_33979.known	chr11	+	1689	12	FSM	ENSG00000134824.14	ENST00000522056.5	1689	12	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	801.568833626484	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTGGCCACCGGGGGTG	61811476	False	NA	NA	False	NA	NA	NA	61816403	61865957	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61816697_61837777_61837889_61840333_61840532_61840623_61840726_61848158_61848285_61857010_61857072_61857453_61857531_61862971_61863070_61863281_61863379_61863706_61863787_61865151_61865278_61865637
transcript_33999.known	chr11	+	3091	12	FSM	ENSG00000134824.14	ENST00000278840.9	3091	12	0	0	0	0	multi-exon	FALSE	canonical	3	2595	junction_10	148.402624110813	7808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTGTTTCCTGCACG	61814096	True	NA	21	True	AATAAA	-20	NA	61828299	61867354	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61828598_61837777_61837889_61840333_61840532_61840623_61840726_61848158_61848285_61857010_61857072_61857453_61857531_61862971_61863070_61863281_61863379_61863706_61863787_61865151_61865278_61865637
transcript_34.known	ERCC-00083	+	1013	1	FSM	ERCC-00083A	DQ516780	1013	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00083_+_0_1000
transcript_340.known	chr1	+	2567	12	FSM	ENSG00000187961.15	ENST00000338591.8	2567	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	66.7824889207214	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGAGCATCTCTCTCTGG	959218	True	NA	9	True	AATAAA	-21	NA	960583	965719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_960801_961292_961553_961628_961751_961825_962048_962354_962472_962703_962918_963108_963254_963336_963505_963919_964009_964106_964181_964348_964531_964962
transcript_3400.known	chr1	-	527	2	FSM	ENSG00000238142.3	ENST00000660464.2	556	2	25	4	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACGTTGGTTTTATCATT	-16889470	False	NA	-4	True	AATAAA	-27	NA	16889501	16888541	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_16888783_16889215
transcript_3401.known	chr1	-	346	2	FSM	ENSG00000238142.3	ENST00000457075.1	346	2	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACGTTGGTTTTATCATT	-16889618	False	NA	-4	True	AATAAA	-27	NA	16889649	16888541	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_16888786_16889547
transcript_34015.known	chr11	-	1725	12	FSM	ENSG00000149485.19	ENST00000542506.5	1725	12	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_11	270.832997244971	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGGGTTGGGTTTGGGGA	-61815226	False	NA	-44	True	NA	NA	NA	61815291	61802312	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61802463_61802800_61802927_61803031_61803112_61803362_61803460_61803669_61803768_61804684_61804762_61806663_61806725_61810750_61810880_61810973_61811076_61812470_61812669_61813242_61813354_61814795
transcript_34019.known	chr11	-	4364	12	FSM	ENSG00000149485.19	ENST00000350997.12	4364	12	0	0	0	0	multi-exon	TRUE	canonical	3	872	junction_5	37.8952449098414	938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTCATTTGTAACCCATG	-61814828	True	NA	-17	True	AATAAA	-18	NA	61817003	61799626	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61802463_61802800_61802927_61803031_61803112_61803362_61803460_61803669_61803768_61804684_61804762_61806663_61806725_61810750_61810880_61810973_61811076_61812470_61812669_61813242_61813354_61816554
transcript_3402.known	chr1	-	1048	1	FSM	ENSG00000238142.3	ENST00000666544.1	1048	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACGTTGGTTTTATCATT	-16889558	False	NA	-4	True	AATAAA	-27	NA	16889589	16888541	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_16888500_16889600
transcript_34051.known	chr11	+	1703	10	FSM	ENSG00000134824.14	ENST00000521849.5	1703	10	0	0	0	0	multi-exon	FALSE	canonical	3	2625	junction_7	146.460461103557	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACAGAGTCTCACCCTGT	61814076	True	NA	57	True	AATAAA	-8	NA	61828279	61864221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61828598_61837777_61837889_61840333_61840532_61840623_61840726_61848158_61848285_61857010_61857072_61857453_61857531_61862971_61863070_61863281_61863379_61863706
transcript_3410.known	chr1	-	3996	29	FSM	ENSG00000159363.19	ENST00000326735.13	3996	29	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_24	66.1673820623091	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTGCCTGTCTTGTA	-17005360	True	NA	-2	True	AATAAA	-20	NA	17011928	16985957	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_16986359_16986462_16986633_16986804_16986957_16987045_16987270_16988137_16988235_16988321_16988475_16989690_16989771_16989886_16990004_16990126_16990288_16991733_16991859_16992008_16992130_16992242_16992403_16992485_16992582_16993628_16993836_16995975_16996165_16996253_16996301_16996385_16996497_16997019_16997176_17000010_17000143_17000245_17000313_17000399_17000535_17002033_17002104_17002295_17002374_17004331_17004412_17004691_17004822_17005013_17005073_17005373_17005557_17005683_17005779_17011728
transcript_34119.known	chr11	+	2016	2	FSM	ENSG00000168496.4	ENST00000305885.3	2016	2	0	0	0	0	multi-exon	FALSE	canonical	3	993	junction_1	0	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAATGTCATGTTCTTTG	61786098	True	NA	24	True	AATAAA	-14	NA	61792910	61797238	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61793029_61795340
transcript_3412.known	chr1	-	3981	29	FSM	ENSG00000159363.19	ENST00000452699.5	3981	29	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_24	66.8855537161678	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTGCCTGTCTTGTA	-17005360	True	NA	-2	True	AATAAA	-20	NA	17011928	16985957	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_16986359_16986462_16986633_16986804_16986957_16987045_16987270_16988137_16988235_16988321_16988475_16989690_16989771_16989886_16990004_16990126_16990288_16991733_16991859_16992008_16992130_16992242_16992403_16992485_16992582_16993628_16993836_16995975_16996165_16996253_16996301_16996385_16996497_16997019_16997176_17000010_17000143_17000245_17000313_17000399_17000535_17002033_17002104_17002295_17002374_17004331_17004412_17004706_17004822_17005013_17005073_17005373_17005557_17005683_17005779_17011728
transcript_34120.known	chr11	+	776	2	FSM	ENSG00000168496.4	ENST00000535723.1	776	2	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTGAAGGCTGGCAAAGT	61786138	True	NA	NA	False	NA	NA	NA	61792950	61795856	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61793211_61795340
transcript_34121.known	chr11	+	2964	12	FSM	ENSG00000134824.14	ENST00000257261.10	2964	12	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_1	750.437745530804	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTGTTTCCTGCACG	61811328	True	NA	21	True	AATAAA	-20	NA	61816255	61867354	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61816427_61837777_61837889_61840333_61840532_61840623_61840726_61848158_61848285_61857010_61857072_61857453_61857531_61862971_61863070_61863281_61863379_61863706_61863787_61865151_61865278_61865637
transcript_34125.known	chr11	-	1790	12	FSM	ENSG00000221968.9	ENST00000278829.7	1790	12	0	0	0	0	multi-exon	TRUE	canonical	3	309	junction_4	52.7822597294655	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGAGTGGAGTGGTGAA	-61891479	False	NA	-11	True	ATTAAA	-16	NA	61891545	61873525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61873866_61875850_61875977_61876110_61876191_61876358_61876456_61876865_61876964_61877510_61877588_61878154_61878216_61878511_61878635_61878745_61878848_61879311_61879510_61880040_61880152_61891168
transcript_34132.nic	chr11	-	2495	11	NIC	ENSG00000221968.9	novel	1790	12	NA	NA	210	0	intron_retention	FALSE	canonical	3	326	junction_4	45.0076660136915	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATGGAGTGGAGTGGTGA	-61891775	False	NA	-12	True	ATTAAA	-15	NA	61891841	61873526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_61873866_61875850_61875977_61876110_61876191_61876358_61876964_61877510_61877588_61878154_61878216_61878511_61878635_61878745_61878848_61879311_61879510_61880040_61880152_61891168
transcript_34138.nic	chr11	-	2917	10	NIC	ENSG00000221968.9	novel	1790	12	NA	NA	-171	0	intron_retention	FALSE	canonical	3	365	junction_5	35.397565655296	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATGGAGTGGAGTGGTGA	-61891650	False	NA	-12	True	ATTAAA	-15	NA	61891716	61873526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_61873866_61875850_61875977_61876110_61876191_61876358_61877588_61878154_61878216_61878511_61878635_61878745_61878848_61879311_61879510_61880040_61880152_61891168
transcript_34155.known	chr11	-	2325	10	FSM	ENSG00000167994.13	ENST00000394836.7	2325	10	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	7.30465773950827	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGGGTGGCCACGCGC	-61917285	True	NA	-5	True	AATAAA	-18	NA	61917566	61897300	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61898361_61899313_61899381_61902441_61902542_61904545_61904659_61904753_61904883_61906465_61906685_61907392_61907471_61907564_61907661_61908053_61908307_61917356
transcript_34158.nic	chr11	-	2117	9	NIC	ENSG00000167994.13	novel	2325	10	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	14.203322674642	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGGGTGGCCACGCGC	-61917296	False	NA	-5	True	AATAAA	-18	NA	61917577	61897300	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_61898361_61899313_61899381_61902441_61902542_61904545_61904659_61904753_61904883_61907392_61907471_61907564_61907661_61908053_61908307_61917356
transcript_34160.known	chr11	-	825	5	FSM	ENSG00000167996.16	ENST00000620041.4	825	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	6558.81365034867	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTTGTCTTTGAGGTCT	-61826339	True	NA	-39	True	AATAAA	-15	NA	61967631	61964565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61964892_61964986_61965113_61965368_61965516_61967311_61967454_61967547
transcript_34161.known	chr11	-	1203	4	FSM	ENSG00000167996.16	ENST00000273550.12	1203	4	0	0	0	0	multi-exon	FALSE	canonical	3	14373	junction_2	587.209408038469	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTCTGGGATTTTTATCT	-61826342	True	NA	NA	False	AATAAA	-18	NA	61967634	61964284	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61964892_61964986_61965113_61965368_61965516_61967311
transcript_34165.known	chr11	-	912	4	FSM	ENSG00000167996.16	ENST00000532829.5	912	4	0	0	0	0	multi-exon	FALSE	canonical	2	134	junction_2	7232.84181125695	7940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTTGTCTTTGAGGTCT	-61826339	True	NA	-39	True	AATAAA	-15	NA	61967631	61964565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61964892_61964986_61965106_61965368_61965516_61967311
transcript_34166.known	chr11	-	786	4	FSM	ENSG00000167996.16	ENST00000526640.5	786	4	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_3	6765.1679621097	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGAAATTTGGTACCCA	-61826315	True	NA	-58	True	AAAACA	-37	NA	61967607	61964584	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61964892_61964986_61965113_61965368_61965516_61967401
transcript_34167.known	chr11	-	983	4	FSM	ENSG00000167996.16	ENST00000534180.1	983	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	6954.01423639613	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTTGTCTTTGAGGTCT	-61826341	True	NA	-39	True	AATAAA	-15	NA	61967633	61964565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61964892_61964986_61965113_61965368_61965578_61967311
transcript_34169.known	chr11	-	788	3	FSM	ENSG00000167996.16	ENST00000534719.1	788	3	0	0	0	0	multi-exon	FALSE	canonical	3	14373	junction_1	719	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGTGATAATGAAAGCTAA	-61826294	True	NA	NA	False	NA	NA	NA	61967586	61964746	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61965113_61965368_61965516_61967311
transcript_34170.known	chr11	-	885	3	FSM	ENSG00000167996.16	ENST00000533138.1	885	3	0	0	0	0	multi-exon	FALSE	canonical	3	15120	junction_1	345.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGGGTGACCACGTGAC	-61826321	True	NA	NA	False	NA	NA	NA	61967613	61964837	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_61964892_61964986_61965516_61967311
transcript_34172.known	chr11	+	1697	1	FSM	ENSG00000279491.1	ENST00000623785.1	1697	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	61967658	True	NA	NA	False	AAAACA	-13	NA	61967793	61969490	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_61967800_61969500
transcript_34173.known	chr11	+	4114	19	FSM	ENSG00000149503.13	ENST00000394818.8	4114	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	1.66666666666667	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAGGAAATAGTGAACACAA	62116796	True	NA	NA	False	AATAAA	-28	NA	62124010	62153169	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62124164_62128150_62128302_62128769_62128884_62129781_62130591_62137831_62137884_62138712_62138771_62138887_62139006_62140233_62140286_62140703_62140822_62140912_62141045_62141499_62141512_62144981_62145092_62145168_62145290_62145628_62145752_62146657_62146903_62148475_62148555_62148738_62148847_62150056_62150208_62151761
transcript_34175.known	chr11	+	3698	18	FSM	ENSG00000149503.13	ENST00000278849.4	3698	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	1.55409938983799	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATCCCTTGAGACCACCT	62116783	True	NA	NA	False	NA	NA	NA	62123997	62152752	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62124164_62128150_62128302_62128769_62128884_62129781_62130591_62137831_62137884_62138712_62138771_62138887_62139006_62140233_62140286_62140703_62140822_62140912_62141045_62144981_62145092_62145168_62145290_62145628_62145752_62146657_62146903_62148475_62148555_62148738_62148847_62150056_62150208_62151761
transcript_34177.nnic	chr11	+	3296	18	NNC	ENSG00000149503.13	novel	3698	18	NA	NA	-12	-426	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	1.61737965704324	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGCTGTTGATACCATGA	62116771	True	NA	15	True	AATAAA	-15	NA	62123985	62152326	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_62124164_62128150_62128302_62128769_62128884_62129781_62130591_62137831_62137884_62138712_62138771_62138887_62139006_62140233_62140286_62140703_62140822_62140912_62141045_62144981_62145092_62145168_62145290_62145628_62145764_62146657_62146903_62148475_62148555_62148738_62148847_62150056_62150208_62151761
transcript_34186.nic	chr11	+	1955	12	ISM	ENSG00000149503.13	ENST00000278849.4	3698	18	-12	7521	-12	3486	5prime_fragment	TRUE	canonical	1	1	junction_6	1.7721444263289	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGAAGAAGAAGCAGATTG	62116771	True	NA	NA	False	NA	NA	NA	62123985	62145231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_62124164_62128150_62128302_62128769_62128884_62129781_62130591_62137831_62137884_62138712_62138771_62138887_62139006_62140233_62140286_62140703_62140822_62140912_62141045_62144981_62145092_62145168
transcript_34196.known	chr11	+	2182	7	FSM	ENSG00000162174.12	ENST00000301776.9	2182	7	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_4	95.7717193237243	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATAAGGGTGTGGTTG	62333128	True	NA	NA	False	AATAAA	-11	NA	62337452	62393406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62337575_62337966_62338168_62356324_62356468_62356986_62357145_62389132_62389252_62391521_62391633_62392078
transcript_34199.known	chr11	+	2270	7	FSM	ENSG00000162174.12	ENST00000415229.6	2270	7	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	120.577314984573	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGGTGTGGTTGGGAGTC	62333123	True	NA	NA	False	AATAAA	-17	NA	62337447	62393412	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62337575_62337889_62338168_62356324_62356468_62356986_62357145_62389132_62389252_62391521_62391633_62392078
transcript_34205.known	chr11	+	1161	6	FSM	ENSG00000162174.12	ENST00000628829.2	1161	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	99.0042423333465	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	62333168	True	NA	NA	False	NA	NA	NA	62337492	62392568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62337575_62337966_62338168_62356986_62357145_62389132_62389252_62391521_62391633_62392078
transcript_34212.nic	chr11	+	2080	5	NIC	ENSG00000162174.12	novel	2270	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_4	168.272658206852	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTGACTCAAGAAAGCTT	62333123	True	NA	NA	False	AATAAA	-21	NA	62337447	62383247	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_62337575_62337966_62338168_62356324_62356468_62356986_62357145_62381796
transcript_34219.known	chr11	+	639	4	FSM	ENSG00000162174.12	ENST00000534571.5	639	4	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_1	26.4196896272458	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACCTGGTTATCTACAG	62333170	True	NA	12	True	ATTAAA	-16	NA	62337494	62357201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62337575_62337966_62338168_62356324_62356468_62356986
transcript_34220.known	chr11	+	1177	4	FSM	ENSG00000162174.12	ENST00000534183.5	1177	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	127.395272893289	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCCTCATGAACCCCCAC	62333126	True	NA	NA	False	GGGGCT	-42	NA	62337450	62389826	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62337575_62337966_62338168_62356986_62357145_62389132
transcript_34221.nic	chr11	+	769	4	ISM	ENSG00000162174.12	ENST00000415229.6	2270	7	-6	36211	-6	0	5prime_fragment	FALSE	canonical	3	80	junction_1	156.313786979908	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACCTGGTTATCTACAG	62333117	True	NA	12	True	ATTAAA	-16	NA	62337441	62357201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_62337575_62337889_62338168_62356324_62356468_62356986
transcript_34222.known	chr11	+	535	4	FSM	ENSG00000162174.12	ENST00000526096.2	535	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	184.591440754982	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTGTCAAAAGTAAGTCT	62333178	True	NA	-57	True	AAAAAG	-42	NA	62337502	62357132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62337575_62337993_62338168_62356324_62356468_62356986
transcript_34224.nic	chr11	+	552	3	ISM	ENSG00000162174.12	ENST00000534183.5	1177	4	-9	32622	-6	3	5prime_fragment	FALSE	canonical	3	44	junction_2	156	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGGTTATCTACAGTTC	62333117	True	NA	15	True	ATTAAA	-19	NA	62337441	62357204	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_62337575_62337966_62338168_62356986
transcript_34226.known	chr11	-	1024	6	FSM	ENSG00000124942.14	ENST00000257247.11	1024	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.49666295470958	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCTTGTGTCAACCTT	-62546270	False	NA	-4	True	AATAAA	-14	NA	62546796	62433545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62433892_62491731_62491832_62535002_62535191_62535944_62536099_62536468_62536568_62546659
transcript_34227.known	chr11	-	18761	5	FSM	ENSG00000124942.14	ENST00000378024.9	18761	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.23606797749979	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGTGCCTTTGCATTC	-62546280	True	NA	0	True	AATAAA	-19	NA	62546806	62515901	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62534075_62535002_62535191_62535944_62536099_62536468_62536568_62546659
transcript_34235.known	chr11	-	5064	17	FSM	ENSG00000255508.7	ENST00000496634.2	5064	17	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	5398.17552367233	218	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCTTTCCTGTCCTGCCT	-62589389	True	NA	-18	True	ATTAAA	-16	NA	62591531	62559602	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62559838_62560068_62560194_62560281_62560455_62566805_62567011_62567398_62567529_62570964_62571109_62571539_62571683_62571837_62571902_62572583_62574909_62576656_62576750_62576906_62577018_62577181_62577292_62578560_62579031_62581105_62581207_62581385_62581702_62589030_62589222_62591403
transcript_34240.known	chr11	-	1446	10	FSM	ENSG00000254772.10	ENST00000329251.5	1446	10	0	0	0	0	multi-exon	FALSE	canonical	3	6531	junction_9	1547.36527166362	4159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCCTGCCTCCTTTGT	-62416091	True	NA	-11	True	ATTAAA	-23	NA	62573891	62559595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62559838_62560068_62560194_62560281_62560455_62566805_62567011_62567398_62567529_62570964_62571109_62571539_62571683_62571837_62571902_62572583_62572743_62573830
transcript_34253.known	chr11	-	2705	9	FSM	ENSG00000149016.16	ENST00000476907.6	2705	9	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	35.2907565801585	638	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTCTCCCGTTTCCTTT	-62589381	True	NA	NA	False	AATAAA	-17	NA	62591523	62575051	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62576245_62576656_62576750_62576906_62577018_62577181_62577292_62578560_62579031_62581105_62581207_62581385_62581702_62589030_62589222_62591403
transcript_34277.known	chr11	-	2265	18	FSM	ENSG00000149480.7	ENST00000527204.5	2265	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	34.3832461012154	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGGTGGATGCCCAGGGC	-62601259	False	448	NA	False	NA	NA	NA	62601275	62593841	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62594041_62594258_62594408_62594515_62594635_62594980_62595071_62595263_62595493_62595751_62595892_62596009_62596108_62596278_62596338_62596457_62596533_62596636_62596826_62597315_62597416_62597609_62597713_62598023_62598142_62598326_62598391_62598521_62598640_62600165_62600260_62600621_62600690_62601022
transcript_34280.known	chr11	-	3083	18	FSM	ENSG00000149480.7	ENST00000278823.7	3083	18	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_15	14.8724682355917	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTCCTGGCTCAGCTGT	-62601849	False	NA	-27	True	AATAAA	-16	NA	62601865	62593213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62594041_62594258_62594408_62594515_62594635_62594980_62595071_62595263_62595493_62595751_62595892_62596009_62596108_62596278_62596338_62596457_62596533_62596636_62596826_62597315_62597416_62597609_62597713_62598023_62598142_62598326_62598391_62598521_62598640_62600165_62600260_62600621_62600690_62601422
transcript_34284.known	chr11	-	2909	22	FSM	ENSG00000149499.12	ENST00000529309.5	2909	22	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	28.9106058264385	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCCGGTGCTTTTGTGG	-62612497	False	2059	-3	True	AATAAA	-15	NA	62612530	62602219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62602679_62602758_62602780_62603148_62603248_62603728_62603817_62603943_62604042_62604112_62604202_62605112_62605181_62605641_62605774_62605854_62605981_62606062_62606215_62606957_62607100_62607665_62607822_62608200_62608297_62608541_62608653_62608735_62608806_62608961_62609133_62609353_62609478_62609628_62609697_62610878_62610993_62611086_62611345_62611424_62611597_62612435
transcript_34288.known	chr11	-	3017	22	FSM	ENSG00000149499.12	ENST00000278845.8	3017	22	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_20	26.4303302718041	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCCGGTGCTTTTGTGGG	-62612491	False	NA	-2	True	AATAAA	-16	NA	62612524	62602218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62602679_62602758_62602890_62603148_62603248_62603728_62603817_62603943_62604042_62604112_62604202_62605112_62605181_62605641_62605774_62605854_62605981_62606062_62606215_62606957_62607100_62607665_62607822_62608200_62608297_62608541_62608653_62608735_62608806_62608961_62609133_62609353_62609478_62609628_62609697_62610878_62610993_62611086_62611348_62611424_62611597_62612435
transcript_34303.nic	chr11	-	3687	21	NIC	ENSG00000149499.12	novel	3266	22	NA	NA	-162	0	intron_retention	FALSE	canonical	3	73	junction_19	21.2051880444386	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCGGTGCTTTTGTGGGG	-62612904	False	NA	-1	True	AATAAA	-17	NA	62612937	62602217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_62602679_62602758_62603248_62603728_62603817_62603943_62604042_62604112_62604202_62605112_62605181_62605641_62605774_62605854_62605981_62606062_62606215_62606957_62607100_62607665_62607822_62608200_62608297_62608541_62608653_62608735_62608806_62608961_62609133_62609353_62609478_62609628_62609697_62610878_62610993_62611086_62611345_62611424_62611597_62612435
transcript_34323.known	chr11	+	862	3	FSM	ENSG00000149489.9	ENST00000534093.5	862	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTTTGGATGGAAGCAA	62611749	True	NA	-7	True	NA	NA	NA	62611785	62615100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62611921_62614257_62614505_62614620
transcript_34324.known	chr11	-	2901	21	FSM	ENSG00000149499.12	ENST00000494176.6	2901	21	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	32.8160021940516	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCCGGTGCTTTTGTGG	-62611662	False	NA	-3	True	AATAAA	-15	NA	62611680	62602219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62602679_62602758_62602780_62603148_62603248_62603728_62603817_62603943_62604042_62604112_62604202_62605112_62605181_62605641_62605774_62605854_62605981_62606062_62606215_62606957_62607100_62607665_62607822_62608200_62608297_62608541_62608653_62608735_62608806_62608961_62609133_62609353_62609478_62609628_62609697_62610878_62610993_62611086_62611348_62611424
transcript_34329.known	chr11	-	1452	5	FSM	ENSG00000149541.10	ENST00000265471.10	1452	5	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_4	47.4341649025257	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGCCTCTTGTTTTCCTTT	-62619927	True	NA	-27	True	AATAAA	-16	NA	62621986	62615295	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62615800_62616505_62616797_62616986_62617348_62620496_62620672_62621865
transcript_34330.known	chr11	-	1120	5	FSM	ENSG00000149541.10	ENST00000534026.5	1120	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	76.4852927038918	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACGGTGTTAGCCAGGA	-62619925	True	NA	NA	False	NA	NA	NA	62621984	62616066	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62616241_62616505_62616797_62616986_62617348_62620496_62620672_62621865
transcript_34345.nnic	chr11	-	3810	25	NNC	ENSG00000089597.18	novel	3835	24	NA	NA	38	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	344.022646924911	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGGTGGTAGTCTGGAT	-62645599	False	NA	69	True	AATAAA	-16	NA	62646688	62624828	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_62625406_62625505_62625925_62626064_62626166_62626334_62626448_62626570_62626685_62626859_62626935_62627047_62627125_62627288_62627354_62628768_62629013_62629193_62629296_62629587_62629685_62629813_62629958_62630196_62630277_62630378_62630506_62630600_62630837_62631029_62631184_62632564_62632746_62633004_62633102_62633183_62633272_62633444_62633515_62634820_62635001_62638982_62639111_62639358_62639468_62639626_62639732_62646561
transcript_34348.known	chr11	-	3906	25	FSM	ENSG00000089597.18	ENST00000346178.8	3906	25	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_18	367.263784628978	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGGTAGTCTGGATTCT	-62629165	True	NA	72	True	AATAAA	-19	NA	62646615	62624825	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62625925_62626064_62626166_62626334_62626448_62626570_62626685_62626859_62626935_62627047_62627125_62627288_62627354_62628768_62629013_62629193_62629296_62629587_62629685_62629813_62629958_62630196_62630277_62630378_62630506_62630600_62630837_62631029_62631184_62632564_62632746_62633004_62633102_62633183_62633272_62633444_62633515_62634309_62634376_62634820_62635001_62638982_62639111_62639358_62639468_62639626_62639732_62646561
transcript_34350.known	chr11	-	3846	25	FSM	ENSG00000089597.18	ENST00000648273.1	3846	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	388.995385219699	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTTGGGGGAGGACTAATG	-62629156	True	NA	-53	True	NA	NA	NA	62646606	62624950	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62625925_62626064_62626166_62626334_62626448_62626570_62626685_62626859_62626935_62627047_62627125_62627288_62627354_62628768_62629013_62629193_62629296_62629587_62629685_62629813_62629958_62630196_62630277_62630378_62630506_62630600_62630837_62631029_62631184_62632564_62632746_62633004_62633102_62633183_62633272_62633444_62633515_62634820_62635001_62638982_62639111_62639358_62639468_62639626_62639732_62639929_62640070_62646561
transcript_34363.known	chr11	-	3835	24	FSM	ENSG00000089597.18	ENST00000356638.8	3835	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	282.204748097496	1306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGGTGGTAGTCTGGAT	-62629163	True	NA	69	True	AATAAA	-16	NA	62646613	62624828	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62625925_62626064_62626166_62626334_62626448_62626570_62626685_62626859_62626935_62627047_62627125_62627288_62627354_62628768_62629013_62629193_62629296_62629587_62629685_62629813_62629958_62630196_62630277_62630378_62630506_62630600_62630837_62631029_62631184_62632564_62632746_62633004_62633102_62633183_62633272_62633444_62633515_62634820_62635001_62638982_62639111_62639358_62639468_62639626_62639732_62646561
transcript_34371.known	chr11	-	3836	23	FSM	ENSG00000089597.18	ENST00000540933.5	3836	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	357.64692409421	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAACTGGTGGTAGTCTG	-62645637	False	NA	66	True	AATAAA	-13	NA	62646726	62624831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62625925_62626064_62626166_62626334_62626448_62626570_62626685_62626859_62626935_62627047_62627125_62627288_62627354_62628768_62629013_62629193_62629296_62629587_62629685_62629813_62629958_62630196_62630277_62630378_62630506_62630600_62630837_62631029_62631184_62632564_62632746_62633004_62633102_62633183_62633272_62633444_62633515_62634820_62635001_62638982_62639111_62639626_62639732_62646561
transcript_34377.known	chr11	-	2626	22	FSM	ENSG00000089597.18	ENST00000534779.5	2626	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	438.705408416798	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCATTAGTGCTGAGAGA	-62629182	True	NA	NA	False	NA	NA	NA	62646632	62625780	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62625925_62626064_62626166_62626334_62626448_62626570_62626685_62626859_62626935_62627047_62627125_62627288_62627354_62628768_62629013_62629193_62629296_62629587_62629685_62629813_62629958_62630196_62630277_62630378_62630506_62630600_62630837_62631029_62631184_62632564_62632746_62633004_62633102_62633183_62633272_62633444_62633515_62634309_62634376_62634820_62635001_62646561
transcript_34400.known	chr11	-	1320	7	FSM	ENSG00000162194.13	ENST00000354588.8	1818	7	498	0	-4	0	multi-exon	TRUE	canonical	2	3	junction_6	1332.83432328753	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTGTGATTAAATGTA	-62655747	False	NA	-1	True	AATAAA	-16	NA	62671769	62662816	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62663160_62663235_62663334_62664848_62664974_62667522_62667748_62669640_62669804_62669881_62670042_62671563
transcript_34406.known	chr11	-	2915	5	FSM	ENSG00000162194.13	ENST00000431002.6	2915	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	1411.14977500618	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTGTGTGATTAAATGT	-62655743	False	NA	-2	True	AATAAA	-15	NA	62671765	62662817	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62663160_62663235_62663334_62664848_62664974_62667522_62667748_62669640
transcript_34413.known	chr11	-	646	4	FSM	ENSG00000278615.5	ENST00000524958.6	646	4	0	0	0	0	multi-exon	FALSE	canonical	3	2476	junction_3	175.689751803823	1198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTGTGATTAAATGTA	-62628992	True	NA	-1	True	AATAAA	-16	NA	62665210	62662816	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62663160_62663235_62663334_62664848_62664974_62665130
transcript_34417.known	chr11	+	1368	3	FSM	ENSG00000214756.8	ENST00000398922.6	1368	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	120.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATCTAGTGGCCTAACCT	62665243	False	NA	NA	False	NA	NA	NA	62665308	62667397	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62665333_62665646_62665947_62666353
transcript_34418.known	chr11	+	2034	3	FSM	ENSG00000214756.8	ENST00000532971.2	2034	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	110	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGCAGCCTCAATTTTCT	62659955	True	NA	11	True	TATAAA	-33	NA	62665311	62668108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62665333_62665646_62665947_62666395
transcript_34423.known	chr11	-	405	3	FSM	ENSG00000278615.5	ENST00000525675.1	405	3	0	0	0	0	multi-exon	FALSE	canonical	3	2476	junction_2	158	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGGCAAAAGAAGACAAAA	-62628973	True	NA	NA	False	NA	NA	NA	62665191	62663114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62663334_62664848_62664974_62665130
transcript_34424.known	chr11	+	2870	2	FSM	ENSG00000214756.8	ENST00000529868.1	2870	2	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTAGCTTCTGTAAC	62659956	True	NA	NA	False	NA	NA	NA	62665312	62668496	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62665333_62665646
transcript_34428.known	chr11	+	1927	2	FSM	ENSG00000204922.5	ENST00000377953.4	1927	2	0	0	0	0	multi-exon	FALSE	canonical	3	914	junction_1	0	460	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGAATTTCTGTGTTGTT	62660296	True	NA	NA	False	AATAAA	-20	NA	62671672	62673686	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62671866_62671952
transcript_34429.known	chr11	-	3285	2	FSM	ENSG00000185085.2	ENST00000330574.2	3285	2	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	0	428	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTGCTTCTGTCATGC	-62652213	True	NA	-1	True	AATAAA	-23	NA	62653302	62646847	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62650000_62653169
transcript_34430.known	chr11	+	376	1	FSM	ENSG00000214756.8	ENST00000594728.1	376	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTGTCCGCGTTCTTTT	62659979	False	NA	21	True	AATAAA	-17	NA	62665335	62665711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62665300_62665700
transcript_34431.known	chr11	-	774	3	FSM	ENSG00000278615.5	ENST00000532786.2	774	3	0	0	0	0	multi-exon	FALSE	canonical	3	2792	junction_2	47.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTGTGATTAAATGTA	-62628963	True	NA	-1	True	AATAAA	-16	NA	62665181	62662816	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62663160_62663235_62663334_62664848
transcript_34432.known	chr11	-	943	10	FSM	ENSG00000162191.14	ENST00000534176.1	943	10	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_9	292.109948858683	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCCAAGAAATGTCCCAGC	-62663059	True	NA	-115	True	NA	NA	NA	62679081	62676612	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62676640_62676812_62677006_62677517_62677635_62677780_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689_62678744_62678864_62678953_62679038
transcript_34435.known	chr11	-	1134	9	FSM	ENSG00000162191.14	ENST00000301935.10	1134	9	0	0	0	0	multi-exon	FALSE	canonical	3	887	junction_5	68.6639233877587	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCTGACTCCTTCCTGA	-62663051	True	NA	-2	True	AATAAA	-19	NA	62679073	62676499	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62676640_62676812_62677006_62677517_62677635_62677780_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689_62678744_62678864
transcript_34438.known	chr11	-	1257	8	FSM	ENSG00000162191.14	ENST00000525717.5	1257	8	0	0	0	0	multi-exon	FALSE	canonical	3	887	junction_4	73.404387345939	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCCTGAGTTCTGTACAT	-62663045	True	NA	-19	True	AATAAA	-2	NA	62679067	62676516	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62676640_62676812_62677006_62677517_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689_62678744_62678864
transcript_34442.known	chr11	-	739	5	FSM	ENSG00000162191.14	ENST00000533908.5	739	5	0	0	0	0	multi-exon	FALSE	canonical	3	887	junction_1	78.4155596804614	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAAAGCAGAGAGAGCCAA	-62663036	True	NA	NA	False	NA	NA	NA	62679058	62677804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62678119_62678338_62678409_62678494_62678602_62678689_62678744_62678864
transcript_34444.known	chr11	-	2073	5	FSM	ENSG00000162191.14	ENST00000532904.5	2073	5	0	0	0	0	multi-exon	FALSE	canonical	3	887	junction_2	81.6945530620004	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGACTCCTTCCTGAAT	-62663036	True	NA	0	True	AATAAA	-21	NA	62679058	62676497	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689
transcript_34445.known	chr11	-	1912	6	FSM	ENSG00000162191.14	ENST00000533476.5	1912	6	0	0	0	0	multi-exon	FALSE	canonical	3	887	junction_3	77.5577204409722	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCCTGACTCCTTCCTG	-62663051	True	NA	-3	True	AATAAA	-18	NA	62679073	62676500	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62676640_62676812_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689
transcript_34449.known	chr11	-	5214	14	FSM	ENSG00000214753.4	ENST00000301785.7	5214	14	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	10.1287568820824	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTATCTCCTGTGGCTGCA	-62721169	True	NA	-4	True	AATAAA	-22	NA	62727457	62712629	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62715380_62715499_62715608_62715863_62715938_62716988_62717190_62720022_62720192_62721294_62721424_62721819_62721943_62722116_62722381_62722600_62722714_62722812_62722904_62723586_62723727_62723913_62723991_62724290_62724427_62726618
transcript_34454.known	chr11	-	2001	12	FSM	ENSG00000168000.16	ENST00000679883.1	2001	12	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_11	150.64050578603	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTGACTCTGAAATGGG	-62709405	True	NA	-37	True	AATAAA	-19	NA	62709537	62690274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62707108_62707325_62709146
transcript_34456.known	chr11	-	1693	11	FSM	ENSG00000168000.16	ENST00000403550.5	1693	11	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_10	139.100287562607	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATTTTGTGTCAGCTTC	-62706222	False	NA	-57	True	NA	NA	NA	62706234	62690294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62705915
transcript_34458.known	chr11	-	1516	11	FSM	ENSG00000168000.16	ENST00000407022.7	1516	11	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_10	99.7569546447765	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATTTTGTGTCAGCTTC	-62706332	False	NA	-57	True	NA	NA	NA	62706344	62690294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62706202
transcript_34459.known	chr11	-	1440	11	FSM	ENSG00000168000.16	ENST00000421906.5	1440	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_10	139.944131709765	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCGTTTTTCCTTCAATA	-62706332	False	NA	-77	True	NA	NA	NA	62706344	62690314	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62706258
transcript_34460.known	chr11	-	1710	11	FSM	ENSG00000168000.16	ENST00000360796.10	1710	11	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_10	92.2520460477707	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTGACTCTGAAATGGG	-62704339	True	NA	-37	True	AATAAA	-19	NA	62707424	62690274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62707108
transcript_34465.known	chr11	-	1882	11	FSM	ENSG00000168000.16	ENST00000683296.1	1882	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	151.848773455698	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTGACTCTGAAATGGG	-62707575	False	NA	-37	True	AATAAA	-19	NA	62707587	62690274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62690522_62690611_62690732_62690816_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62707108
transcript_34474.known	chr11	-	1364	10	FSM	ENSG00000168000.16	ENST00000278893.11	1364	10	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_4	152.841077795625	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTTGACTCTGAAATGG	-62706303	False	NA	-38	True	AATAAA	-18	NA	62706315	62690275	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62706202
transcript_34476.nic	chr11	-	1707	10	NIC	ENSG00000168000.16	novel	1863	12	NA	NA	23	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_4	148.492507189279	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTTGACTCTGAAATGG	-62707552	False	NA	-38	True	AATAAA	-18	NA	62707564	62690275	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62707108
transcript_34482.nic	chr11	-	1907	8	ISM	ENSG00000214753.4	ENST00000301785.7	5214	14	-179	9245	-179	989	5prime_fragment	FALSE	canonical	3	29	junction_2	7.20544012166771	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCTGAGAAAAGATACAATG	-62727626	False	NA	NA	False	AAGAAA	-2	NA	62727636	62721874	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_62721943_62722116_62722381_62722600_62722714_62722812_62722904_62723586_62723727_62723913_62723991_62724290_62724427_62726618
transcript_34484.known	chr11	+	864	3	FSM	ENSG00000162188.6	ENST00000294117.6	864	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAGCTCCTGTGTTAGAA	62707224	True	NA	4	True	AATAAA	-17	NA	62707675	62709201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62707916_62708294_62708395_62708677
transcript_34488.known	chr11	+	858	4	FSM	ENSG00000162222.14	ENST00000532583.1	858	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	62.0232931154811	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGGCTTGAGAAATATA	62726482	False	NA	-12	True	AATACA	-16	NA	62728641	62738603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62728737_62728822_62729087_62735381_62735565_62738287
transcript_34490.nic	chr11	+	949	4	NIC	ENSG00000162222.14	novel	1133	3	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	68.9975844987828	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTTGTGGGTGGAATT	62728061	False	NA	21	True	AATATA	-14	NA	62728074	62738636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_62728228_62728822_62729087_62735381_62735565_62738287
transcript_34491.nnic	chr11	+	2027	4	NNC	ENSG00000162222.14	novel	858	4	NA	NA	3	-4	intron_retention	FALSE	non_canonical	0	0	junction_3	80.1013247220183	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGAGTAAAGCATTTAAGT	62726329	True	NA	NA	False	ATTAAA	-15	NA	62728488	62740280	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_62729087_62735381_62735565_62738287_62739146_62739892
transcript_34494.known	chr11	+	1133	3	FSM	ENSG00000162222.14	ENST00000316461.9	1133	3	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	30.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTTGTGGGTGGAATT	62726326	True	NA	21	True	AATATA	-14	NA	62728485	62738636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62729087_62735381_62735565_62738287
transcript_34504.nnic	chr11	-	2574	4	NNC	ENSG00000185670.9	novel	2950	2	NA	NA	-3849	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.2374789822141	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTCCTAATTTTATTTAT	-62755054	True	NA	-7	True	AATAAA	-21	NA	62758033	62748318	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_62748644_62751896_62753716_62754237_62754520_62757885
transcript_34506.nnic	chr11	-	2931	4	NNC	ENSG00000185670.9	novel	2950	2	NA	NA	-3905	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	18.8384948679264	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTCCTAATTTTATTTAT	-62755110	True	NA	-7	True	AATAAA	-21	NA	62758089	62748318	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_62748651_62751602_62753716_62754237_62754520_62757885
transcript_34514.nnic	chr11	-	3227	4	NNC	ENSG00000185670.9	novel	2950	2	NA	NA	-3849	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	20.2374789822141	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTCCTAATTTTATTTAT	-62755054	True	NA	-7	True	AATAAA	-21	NA	62758033	62748318	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_62748700_62751299_62753716_62754237_62754520_62757885
transcript_34539.nnic	chr11	-	2406	3	NNC	ENSG00000185670.9	novel	2950	2	NA	NA	-3992	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTCCTAATTTTATTTAT	NA	False	NA	-7	True	AATAAA	-21	NA	62758176	62748318	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_62748635_62751916_62753716_62757885
transcript_34542.nnic	chr11	-	2611	3	NNC	ENSG00000185670.9	novel	2950	2	NA	NA	-3867	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	20.5	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTCCTAATTTTATTTAT	-62755072	True	NA	-7	True	AATAAA	-21	NA	62758051	62748318	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_62748651_62751602_62753716_62757885
transcript_34545.nnic	chr11	-	3088	3	NNC	ENSG00000185670.9	novel	2950	2	NA	NA	-3992	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTCCTAATTTTATTTAT	NA	False	NA	-7	True	AATAAA	-21	NA	62758176	62748318	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_62748700_62751299_62753716_62757885
transcript_34552.nnic	chr11	-	2366	3	NNC	ENSG00000185670.9	novel	2950	2	NA	NA	-3849	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTTGGCTGGTTTCTT	-62755054	True	NA	-5	True	CATAAA	-27	NA	62758033	62750962	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_62751291_62751825_62753716_62757885
transcript_34554.nnic	chr11	-	3457	3	NNC	ENSG00000185670.9	novel	2950	2	NA	NA	-3849	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	14	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTTGGCTGGTTTCTT	-62755054	True	NA	-5	True	CATAAA	-27	NA	62758033	62750962	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_62753716_62753963_62754520_62757885
transcript_34556.nnic	chr11	-	3288	3	NNC	ENSG00000185670.9	novel	2950	2	NA	NA	-3954	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_1	3.5	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTTGGCTGGTTTCTT	-62758113	False	NA	-5	True	CATAAA	-27	NA	62758138	62750962	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_62753716_62754237_62754520_62757885
transcript_34558.nnic	chr11	-	3144	3	NNC	ENSG00000185670.9	novel	2950	2	NA	NA	-3929	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTTGGCTGGTTTCTT	-62755134	True	NA	-5	True	CATAAA	-27	NA	62758113	62750962	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_62753716_62754356_62754520_62757885
transcript_34559.nnic	chr11	-	3828	3	NNC	ENSG00000185670.9	novel	2950	2	NA	NA	-4651	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	19	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTTGGCTGGTTTCTT	NA	False	NA	-5	True	CATAAA	-27	NA	62758835	62750962	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_62753716_62754394_62754520_62757885
transcript_34564.nnic	chr11	-	3044	2	NNC	ENSG00000185670.9	novel	2950	2	NA	NA	-3992	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	0	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTTGGCTGGTTTCTT	NA	False	NA	-5	True	CATAAA	-27	NA	62758176	62750962	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_62753716_62757885
transcript_34566.known	chr11	-	2972	2	FSM	ENSG00000185670.9	ENST00000673933.1	2972	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGTGTTGGCTGGTTTC	-62754159	False	NA	-7	True	CATAAA	-25	NA	62754184	62750964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62753716_62753963
transcript_34570.known	chr11	+	919	8	FSM	ENSG00000168002.12	ENST00000525455.5	919	8	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	439.576326635973	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATGTGTTCTAAGTATAA	62750075	True	NA	-22	True	NA	NA	NA	62761579	62766673	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62761661_62761794_62761905_62762541_62762867_62765181_62765233_62765339_62765406_62765652_62765725_62766242_62766277_62766493
transcript_34574.known	chr11	+	791	8	FSM	ENSG00000168002.12	ENST00000301788.12	791	8	0	0	0	0	multi-exon	FALSE	canonical	3	977	junction_2	75.6339196122901	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGTGTTATCTTCTTTT	62750075	True	NA	15	True	TATAAA	-17	NA	62761579	62766710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62761661_62761794_62761905_62762866_62763027_62765181_62765233_62765339_62765406_62765652_62765725_62766242_62766277_62766493
transcript_34578.known	chr11	+	1556	7	FSM	ENSG00000168002.12	ENST00000531944.5	1556	7	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_2	342.071832937015	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGTGTTATCTTCTTTT	62750112	True	NA	15	True	TATAAA	-17	NA	62761616	62766710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62761661_62761794_62762867_62765181_62765233_62765339_62765406_62765652_62765725_62766242_62766277_62766493
transcript_34586.known	chr11	+	868	7	FSM	ENSG00000168002.12	ENST00000527435.5	868	7	0	0	0	0	multi-exon	FALSE	canonical	3	977	junction_1	81.6938730192717	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGTGTTATCTTCTTTT	62750132	True	NA	15	True	TATAAA	-17	NA	62761636	62766710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62761905_62762866_62763027_62765181_62765233_62765339_62765406_62765652_62765725_62766242_62766277_62766493
transcript_34597.known	chr11	+	2023	11	FSM	ENSG00000162227.8	ENST00000294168.8	2023	11	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_5	21.7402851867219	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACGTCTCCACCTTCGTGG	62769594	True	NA	16	True	AATAAA	-16	NA	62771395	62787342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62771491_62775770_62775931_62776383_62776471_62777977_62778129_62778284_62778336_62778868_62778964_62781893_62781969_62782112_62782334_62782692_62782826_62786259_62786389_62786516
transcript_34600.nnic	chr11	+	2085	11	NNC	ENSG00000162227.8	novel	2023	11	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_5	54.8635580326322	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACGTCTCCACCTTCGTGG	62771293	False	NA	16	True	AATAAA	-16	NA	62771306	62787342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_62771491_62775770_62775931_62776383_62776471_62777977_62778129_62778284_62778336_62778895_62778964_62781893_62781969_62782112_62782334_62782692_62782826_62786259_62786389_62786516
transcript_34622.nic	chr11	+	2587	10	NIC	ENSG00000162227.8	novel	2023	11	NA	NA	-2	0	intron_retention	FALSE	canonical	3	178	junction_7	14.544949486181	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACGTCTCCACCTTCGTGG	62769563	True	NA	16	True	AATAAA	-16	NA	62771364	62787342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_62771491_62775770_62775931_62776383_62776471_62777977_62778129_62778284_62778964_62781893_62781969_62782112_62782334_62782692_62782826_62786259_62786389_62786516
transcript_34635.nic	chr11	+	2946	9	NIC	ENSG00000162227.8	novel	2023	11	NA	NA	-2	0	intron_retention	FALSE	canonical	3	179	junction_4	13.4814687627128	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACGTCTCCACCTTCGTGG	62769563	True	NA	16	True	AATAAA	-16	NA	62771364	62787342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_62771491_62775770_62775931_62776383_62776471_62777977_62778129_62778284_62778964_62781893_62781969_62782112_62782826_62786259_62786389_62786516
transcript_34642.known	chr11	+	1043	5	FSM	ENSG00000185475.11	ENST00000333449.9	1043	5	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_3	14.9227175809234	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGTTGTTACTCCATTC	62783358	True	NA	39	True	AATGAA	-20	NA	62787401	62790400	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62787528_62789022_62789211_62789291_62789427_62789600_62789680_62789885
transcript_34647.known	chr11	+	797	4	FSM	ENSG00000185475.11	ENST00000533861.5	797	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	170.411919249277	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTGAGTTTTTGATGTTA	62783371	True	NA	26	True	NA	NA	NA	62787414	62790246	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62787528_62789022_62789211_62789291_62789427_62789885
transcript_34649.known	chr11	-	857	3	FSM	ENSG00000168569.8	ENST00000528367.1	857	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCAGATCGGGGAGGGG	-62787754	True	NA	NA	False	NA	NA	NA	62791992	62771660	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62772133_62774594_62774666_62791678
transcript_34650.known	chr11	-	736	2	FSM	ENSG00000168569.8	ENST00000525631.1	736	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCCGCCACGGCCCCGCA	-62787759	True	NA	NA	False	NA	NA	NA	62791997	62787508	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62787926_62791678
transcript_34652.known	chr11	-	1273	2	FSM	ENSG00000168569.8	ENST00000307366.8	1273	2	0	0	0	0	multi-exon	FALSE	canonical	3	592	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATGGGGTGGCTTCAGAC	-62787768	True	NA	NA	False	NA	NA	NA	62792006	62789970	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62790916_62791678
transcript_34657.nic	chr11	-	2253	21	NIC	ENSG00000162231.14	novel	2290	21	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_3	37.6628464139396	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCGTGTTCTGCGTGCTGG	-62804051	True	NA	-12	True	TATAAA	-14	NA	62805445	62792129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_62792515_62792640_62792702_62794257_62794399_62794934_62795008_62795900_62795944_62796065_62796182_62796286_62796346_62796459_62796568_62797182_62797239_62797317_62797387_62798538_62798576_62800376_62800487_62801093_62801202_62801328_62801418_62801561_62801632_62801738_62801820_62801941_62802047_62802176_62802261_62803418_62803573_62803791_62803979_62805328
transcript_34660.known	chr11	-	2290	21	FSM	ENSG00000162231.14	ENST00000294172.7	2290	21	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_11	17.2669481959031	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCGTGTTCTGCGTGCTGG	-62804046	True	NA	-12	True	TATAAA	-14	NA	62805440	62792129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62792515_62792640_62792702_62794257_62794441_62794934_62795008_62795900_62795944_62796065_62796182_62796286_62796346_62796459_62796568_62797182_62797239_62797317_62797387_62798538_62798576_62800376_62800487_62801093_62801202_62801328_62801418_62801561_62801632_62801738_62801820_62801941_62802047_62802176_62802261_62803418_62803573_62803791_62803979_62805328
transcript_34666.known	chr11	-	4128	20	FSM	ENSG00000162231.14	ENST00000531709.6	4128	20	0	0	0	0	multi-exon	TRUE	canonical	3	156	junction_10	16.4860387505371	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCGTGCTGGATTGGTT	-62804076	True	NA	-5	True	TATAAA	-21	NA	62805470	62792122	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62792515_62792640_62792702_62794257_62794441_62794934_62795008_62795900_62795944_62796065_62796182_62796286_62796346_62796459_62796568_62797182_62797239_62797317_62797387_62798538_62800487_62801093_62801202_62801328_62801418_62801561_62801632_62801738_62801820_62801941_62802047_62802176_62802261_62803418_62803573_62803791_62803979_62805328
transcript_3467.known	chr1	-	1045	9	FSM	ENSG00000117122.14	ENST00000375535.4	1045	9	0	0	0	0	multi-exon	FALSE	canonical	3	3304	junction_8	298.350360314849	1341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCAAGTCACTTTTTCGGT	-16964397	True	NA	NA	False	ATTAAA	-18	NA	16980620	16974501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_16975024_16975268_16975343_16975642_16975731_16976500_16976546_16976707_16976795_16976896_16976924_16977108_16977199_16978236_16978315_16980586
transcript_34678.known	chr11	-	1568	11	FSM	ENSG00000162236.13	ENST00000394690.5	1568	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_10	55.3584681868998	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAATTACAGCAAGACTGT	-62832026	False	10760	-30	True	NA	NA	NA	62832042	62806924	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62807629_62824165_62824288_62824458_62824566_62825035_62825118_62825282_62825340_62825422_62825540_62827154_62827226_62827342_62827399_62827560_62827632_62831018_62831111_62831953
transcript_34680.known	chr11	-	1719	11	FSM	ENSG00000162236.13	ENST00000491231.5	1719	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	56.5406048782643	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCGTTTTCTCCCAATTA	-62832026	False	10760	-42	True	NA	NA	NA	62832042	62806936	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62807629_62824165_62824288_62824458_62824566_62825024_62825118_62825282_62825340_62825422_62825540_62827154_62827226_62827342_62827399_62827560_62827632_62831018_62831263_62831953
transcript_34688.known	chr11	-	1785	11	FSM	ENSG00000162236.13	ENST00000377897.8	1785	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	56.8542874372725	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCCATGTCATCATTTCT	-62832025	False	10760	-2	True	NA	NA	NA	62832041	62806896	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62807667_62824165_62824288_62824458_62824566_62825035_62825118_62825282_62825340_62825422_62825540_62827154_62827226_62827342_62827399_62827560_62827632_62831018_62831263_62831953
transcript_34692.known	chr11	-	1366	12	FSM	ENSG00000133316.16	ENST00000529106.5	1366	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_11	170.866242210896	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGACCCTGAGCCTTTT	-62840140	False	NA	-6	True	AATAAA	-14	NA	62840156	62832911	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62833132_62833617_62833675_62833791_62833938_62834275_62834332_62834426_62834528_62835430_62835533_62835694_62835842_62835960_62836037_62839113_62839236_62839321_62839429_62839506_62839660_62840077
transcript_34696.known	chr11	-	1219	11	FSM	ENSG00000133316.16	ENST00000278856.9	1219	11	0	0	0	0	multi-exon	FALSE	canonical	3	564	junction_6	27.343006418461	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGACCCTGAGCCTTTTG	-62828830	True	NA	-5	True	AATAAA	-15	NA	62839590	62832910	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62833132_62833617_62833675_62833791_62833938_62834275_62834332_62834426_62834528_62835430_62835533_62835694_62835842_62835960_62836037_62839113_62839236_62839321_62839429_62839506
transcript_34697.known	chr11	-	1153	10	FSM	ENSG00000133316.16	ENST00000311713.11	1153	10	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_1	175.56476769079	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGACCCTGAGCCTTTTG	-62828821	True	NA	-5	True	AATAAA	-15	NA	62839581	62832910	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62833132_62833791_62833938_62834275_62834332_62834426_62834528_62835430_62835533_62835694_62835842_62835960_62836037_62839113_62839236_62839321_62839429_62839506
transcript_34700.known	chr11	-	1117	11	FSM	ENSG00000255717.8	ENST00000689147.1	1162	11	36	9	0	0	multi-exon	FALSE	canonical	3	88	junction_10	48.1257727210691	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTTACTTTTTTTGTG	-62846784	True	NA	-47	True	AATAAA	-17	NA	62855886	62851986	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423_62855467_62855864
transcript_34701.known	chr11	-	1394	11	FSM	ENSG00000255717.8	ENST00000540725.6	1394	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_10	70.7675066679617	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTTTACTTTTTTTGT	-62846783	True	NA	-48	True	AATAAA	-16	NA	62855885	62851987	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423_62855746_62855864
transcript_34703.known	chr11	-	1513	10	FSM	ENSG00000255717.8	ENST00000658540.1	1513	10	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_9	28.1547750483766	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTTTACTTTTTTTGT	-62846783	True	NA	-48	True	AATAAA	-16	NA	62855885	62851987	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423
transcript_34708.known	chr11	-	1038	9	ISM	ENSG00000255717.8	ENST00000537869.6	1069	10	425	4	0	0	3prime_fragment	FALSE	canonical	3	36	junction_5	68.5865101532364	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTCCTGTTTACTTTTTT	-62846358	False	NA	-51	True	AATAAA	-13	NA	62855460	62851990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854518_62854552_62854887_62854939_62855132_62855217_62855423
transcript_3471.nnic	chr1	-	1029	8	NIC	ENSG00000117122.14	novel	1045	9	NA	NA	-62	0	combination_of_known_splicesites	FALSE	canonical	3	134	junction_6	1363.60310522213	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCAAGTCACTTTTTCGGT	-16964471	True	NA	NA	False	ATTAAA	-18	NA	16980694	16974501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_16975024_16975268_16975343_16975642_16975731_16976500_16976546_16976707_16976795_16976896_16976924_16978236_16978315_16980586
transcript_34710.known	chr11	-	1785	9	FSM	ENSG00000255717.8	ENST00000660547.1	1785	9	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_8	50.1346624103524	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCCTGTTTACTTTTTTT	-62846784	True	NA	-50	True	AATAAA	-14	NA	62855886	62851989	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62852682_62852810_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423_62855467_62855864
transcript_34711.known	chr11	-	754	8	FSM	ENSG00000255717.8	ENST00000545440.5	754	8	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_6	95.0844951844926	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTACTGACCTAGCTTG	-62846386	False	NA	NA	False	NA	NA	NA	62855488	62852251	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854518_62854552_62855132_62855217_62855423
transcript_34713.known	chr11	-	3294	4	FSM	ENSG00000255717.8	ENST00000665371.1	3294	4	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_3	36.3807030657127	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTACTTTTTTTGTGTGT	-62846721	True	NA	-44	True	AATAAA	-20	NA	62855823	62851983	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62852682_62852810_62853591_62853800_62855217_62855423
transcript_34714.known	chr11	-	1202	9	FSM	ENSG00000255717.8	ENST00000663967.1	1202	9	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_8	25.0271727328518	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTTTACTTTTTTTGT	-62846265	False	NA	-48	True	AATAAA	-16	NA	62855367	62851987	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132
transcript_34719.nic	chr11	+	2459	13	NIC	ENSG00000168003.18	novel	2334	13	NA	NA	-37	0	intron_retention	FALSE	canonical	3	195	junction_3	765.916589598516	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTCCCTCTGCTTCTCTC	NA	False	NA	26	True	AATAAA	-21	NA	62855966	62888860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_62856382_62870744_62870838_62871576_62871670_62876783_62876880_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_34721.known	chr11	+	2334	13	FSM	ENSG00000168003.18	ENST00000538084.2	2334	13	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_3	773.674332146429	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAGGAATTTCTCTCCT	62841890	True	NA	46	True	AATAAA	-41	NA	62856108	62888880	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62856382_62870744_62870838_62871576_62871670_62876786_62876880_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_34729.known	chr11	+	2197	12	FSM	ENSG00000168003.18	ENST00000680725.1	2197	12	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	716.324179808634	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAGGAATTTCTCTCCT	62841892	True	NA	46	True	AATAAA	-41	NA	62856110	62888880	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62856382_62870744_62870796_62871576_62871670_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_34737.known	chr11	+	2161	12	FSM	ENSG00000168003.18	ENST00000377890.6	2161	12	0	0	0	0	multi-exon	FALSE	canonical	3	578	junction_2	621.516487151912	1361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTATGAGTGAACCCCCAA	62841883	True	NA	16	True	TTTAAA	-23	NA	62856101	62888793	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62856382_62870744_62870838_62871576_62871670_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_34741.known	chr11	+	2222	12	FSM	ENSG00000168003.18	ENST00000377891.6	2222	12	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_2	762.208166616049	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTCCCTCTGCTTCTCTC	62841892	True	NA	26	True	AATAAA	-21	NA	62856110	62888860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62856382_62871576_62871670_62876783_62876880_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_34742.nic	chr11	+	2346	12	NIC	ENSG00000168003.18	novel	2222	12	NA	NA	-20	0	intron_retention	FALSE	canonical	3	141	junction_2	771.161322372931	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTCCCTCTGCTTCTCTC	NA	False	NA	26	True	AATAAA	-21	NA	62855983	62888860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_62856382_62871576_62871670_62876786_62876880_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_34747.known	chr11	+	2313	12	FSM	ENSG00000168003.18	ENST00000681569.1	2313	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	731.711104532293	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAGGAATTTCTCTCCT	62841890	True	NA	46	True	AATAAA	-41	NA	62856108	62888880	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62856454_62870744_62870838_62871576_62871670_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_34759.known	chr11	+	2084	11	FSM	ENSG00000168003.18	ENST00000535296.5	2084	11	0	0	0	0	multi-exon	FALSE	canonical	3	489	junction_1	573.772263184619	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCATAGCAGGAATTTCT	62841949	True	NA	41	True	AATAAA	-36	NA	62856167	62888875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62856382_62871576_62871670_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_34770.known	chr11	+	1993	10	FSM	ENSG00000168003.18	ENST00000377889.6	1993	10	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	611.37903217861	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGAAGTCTTCCCTCTGC	62841925	True	NA	19	True	AATAAA	-14	NA	62856143	62888853	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62856382_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_34781.known	chr11	+	1905	9	FSM	ENSG00000168003.18	ENST00000681657.1	1905	9	0	0	0	0	multi-exon	FALSE	canonical	3	1842	junction_2	156.857369527224	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAGGAATTTCTCTCCT	62873419	True	NA	46	True	AATAAA	-41	NA	62880895	62888880	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_34782.known	chr11	+	1512	8	FSM	ENSG00000168003.18	ENST00000679594.1	1512	8	0	0	0	0	multi-exon	FALSE	canonical	3	1842	junction_1	161.620240195392	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGCATGGTGAAGTCTT	62881136	True	NA	11	True	AATAAA	-6	NA	62881698	62888845	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_34783.known	chr11	+	1413	9	FSM	ENSG00000168003.18	ENST00000536981.6	1413	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	691.536141047596	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAGGAATTTCTCTCCT	62881136	True	NA	46	True	AATAAA	-41	NA	62881698	62888880	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62881759_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_34784.known	chr11	+	1929	9	FSM	ENSG00000168003.18	ENST00000680610.1	1929	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	661.599659442929	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGGTGAAGTCTTCCCT	62873386	True	NA	15	True	AATAAA	-10	NA	62880862	62888849	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888112_62888219_62888330
transcript_34785.known	chr11	+	1975	8	FSM	ENSG00000168003.18	ENST00000680297.1	1975	8	0	0	0	0	multi-exon	FALSE	canonical	3	1842	junction_2	160.721333178815	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCCAAATAGGGTGTTTT	62873386	True	NA	28	True	TTTAAA	-35	NA	62880862	62888805	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134
transcript_34786.known	chr11	+	749	3	FSM	ENSG00000257002.1	ENST00000543624.1	749	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	2.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACGTGTGTGTACTCAAC	62909281	True	NA	16	True	AATAAA	-16	NA	62909545	62918361	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_62909616_62910602_62910846_62917925
transcript_34787.known	chr11	-	2646	2	FSM	ENSG00000168539.4	ENST00000306960.4	2646	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGGGCCTTCCTAACTG	NA	False	NA	NA	False	AATAAA	-20	NA	62921363	62908678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_62911179_62921217
transcript_34788.known	chr11	-	3042	6	FSM	ENSG00000168004.10	ENST00000540857.6	3042	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	12.7184904764677	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTTATTTTTCACTT	-63491150	False	NA	-4	True	ATTAAA	-16	NA	63491167	63461403	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_63463596_63466109_63466373_63468356_63468466_63488870_63488977_63490242_63490334_63490886
transcript_34789.known	chr11	-	1166	6	FSM	ENSG00000168004.10	ENST00000301790.4	1166	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	12.7184904764677	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATAGACCCACAGACTCTC	-63491177	False	NA	NA	False	AATATA	-6	NA	63491194	63463336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_63463596_63466109_63466373_63468356_63468466_63488870_63488977_63490242_63490364_63490886
transcript_34794.known	chr11	-	2599	4	FSM	ENSG00000168004.10	ENST00000536887.5	2599	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	24.1430919496424	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTTATTTTTCACTT	-63490521	True	NA	-4	True	ATTAAA	-16	NA	63490939	63461403	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_63463596_63466109_63466373_63490242_63490334_63490886
transcript_34795.known	chr11	+	1699	9	FSM	ENSG00000133317.16	ENST00000394618.9	1699	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	2.81735691739616	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTCGTTCTCATCTAGC	63506052	True	NA	NA	False	AATAAA	-18	NA	63506083	63516772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63506528_63508552_63508642_63508777_63508992_63509777_63509898_63510462_63510502_63511078_63511106_63511751_63511841_63515562_63515714_63516246
transcript_34797.known	chr11	+	1667	8	FSM	ENSG00000133317.16	ENST00000255684.10	1667	8	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_4	3.4166459266004	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTATTTCGTTCTCAT	63506052	True	NA	NA	False	AATAAA	-13	NA	63506083	63516767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63506528_63508552_63508642_63508777_63508992_63509777_63509898_63510462_63510502_63511751_63511841_63515562_63515714_63516246
transcript_34802.known	chr11	-	1075	5	FSM	ENSG00000176485.13	ENST00000415826.3	1075	5	0	0	0	0	multi-exon	FALSE	canonical	3	560	junction_4	316.133278855612	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCGGCTATAAGGAAATT	-63603103	True	NA	NA	False	AAAAAG	-1	NA	63614433	63574461	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_63575047_63590099_63590369_63598060_63598164_63613999_63614069_63614384
transcript_34805.known	chr11	-	2594	4	FSM	ENSG00000176485.13	ENST00000323646.9	2594	4	0	0	0	0	multi-exon	FALSE	canonical	3	1191	junction_3	76.1883630659346	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGATACATTCAAAATATAA	-63603039	True	NA	NA	False	ATTAAA	-29	NA	63614369	63573194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_63575047_63590099_63590369_63598060_63598164_63613999
transcript_34806.known	chr11	-	678	4	FSM	ENSG00000176485.13	ENST00000394613.3	678	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	614.513538409764	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATAATAAGGCTTATTTT	-63614124	False	NA	8	True	NA	NA	NA	63614158	63574849	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_63575047_63590099_63590369_63598060_63598114_63613999
transcript_34814.known	chr11	-	6899	13	FSM	ENSG00000184743.13	ENST00000398868.8	6899	13	0	0	0	0	multi-exon	TRUE	canonical	3	120	junction_7	18.891503087073	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTATCTGTGTTTTCTTTC	-63671328	False	140	-11	True	AATAAA	-14	NA	63671376	63624086	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_63629406_63631039_63631472_63633025_63633098_63635533_63635591_63636206_63636335_63643356_63643496_63644168_63644262_63646506_63646564_63651935_63651987_63652470_63652576_63658760_63658905_63659037_63659253_63671289
transcript_34818.known	chr11	+	2645	8	FSM	ENSG00000133318.14	ENST00000356000.7	2645	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	900.988731271125	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGTGGCATCATTCTGC	63659690	True	NA	40	True	AATAAA	-21	NA	63681449	63759891	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63681779_63704850_63704908_63749990_63750199_63752506_63752646_63753068_63753139_63753661_63753709_63756111_63756171_63758155
transcript_34820.known	chr11	+	4886	8	FSM	ENSG00000133318.14	ENST00000339997.8	4886	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	879.873181956656	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGTGGCATCATTCTGC	63659723	True	NA	40	True	AATAAA	-21	NA	63681482	63759891	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63681779_63718701_63721033_63749990_63750199_63752506_63752646_63753068_63753139_63753661_63753709_63756111_63756171_63758155
transcript_34821.known	chr11	+	3124	8	FSM	ENSG00000133318.14	ENST00000540798.5	3124	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	881.492866374645	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAATCAAATTCATAGGA	63659736	True	NA	NA	False	GATAAA	-27	NA	63681495	63758421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63681779_63718980_63721033_63749990_63750199_63752506_63752646_63753068_63753139_63753661_63753709_63756111_63756171_63758155
transcript_34825.known	chr11	+	2532	7	FSM	ENSG00000133318.14	ENST00000537981.5	2532	7	0	0	0	0	multi-exon	FALSE	canonical	3	1800	junction_6	90.9183088760943	1800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAATGACTGTGGCATCA	63659740	True	NA	34	True	AATAAA	-15	NA	63681499	63759885	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63681779_63749990_63750199_63752506_63752646_63753068_63753139_63753661_63753709_63756111_63756171_63758155
transcript_34831.known	chr11	+	2524	6	FSM	ENSG00000133318.14	ENST00000341307.6	2524	6	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_5	785.458337532934	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAAACAATGACTGTGGCA	63659686	True	NA	31	True	AATAAA	-12	NA	63681445	63759882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63681779_63749990_63750199_63752506_63752646_63753068_63753139_63753661_63753709_63758155
transcript_34839.known	chr11	+	992	5	FSM	ENSG00000133318.14	ENST00000536011.5	992	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	997.893625342902	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTTTTCAGCACTAGTCT	63659740	True	NA	NA	False	AATGAA	-24	NA	63681499	63758543	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63681779_63749990_63750199_63753068_63753139_63753661_63753709_63758155
transcript_3484.known	chr1	-	2371	6	FSM	ENSG00000117122.14	ENST00000490075.5	2371	6	0	0	0	0	multi-exon	FALSE	canonical	3	3304	junction_5	363.467192467216	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCAAGTCACTTTTTCGGT	-16964398	True	NA	NA	False	ATTAAA	-18	NA	16980621	16974501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_16975024_16975268_16975343_16975642_16975731_16976500_16976546_16976707_16978315_16980586
transcript_34841.known	chr11	+	1407	4	FSM	ENSG00000133318.14	ENST00000354497.4	1407	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	892.575424761901	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAGAAAAAAATAACCTGCA	63659813	True	NA	-24	True	AATAAA	-36	NA	63681572	63759089	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63681779_63749990_63750199_63756111_63756171_63758155
transcript_34845.known	chr11	-	5716	5	FSM	ENSG00000188070.9	ENST00000433688.2	5716	5	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_3	6.75925291729789	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTGTGTTTTTTTTTTT	-63765470	True	NA	0	True	AATAAA	-25	NA	63768775	63759891	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_63763870_63764037_63764599_63764867_63765255_63765806_63766305_63768483
transcript_34846.known	chr11	-	390	2	FSM	ENSG00000188070.9	ENST00000546282.3	390	2	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTTCTGATCCTGTCTT	-63768295	False	NA	1	True	AATAAA	-37	NA	63768641	63767322	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_63767555_63768483
transcript_34849.known	chr11	+	1954	6	FSM	ENSG00000168005.9	ENST00000294244.9	1954	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	6.52380257212004	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCCGTCTGGGCCATCA	63805840	True	NA	26	True	AATAAA	-18	NA	63813455	63827716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63813814_63817804_63818135_63818215_63818366_63818526_63818653_63818801_63819003_63826927
transcript_34850.nnic	chr11	+	1882	6	NNC	ENSG00000168005.9	novel	1954	6	NA	NA	31	-3	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_5	19.7949488506538	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAGTTCCGTCTGGGCCA	63805871	True	NA	23	True	AATAAA	-15	NA	63813486	63827713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_63813814_63817804_63818135_63818215_63818366_63818526_63818653_63818801_63819003_63826965
transcript_34860.known	chr11	+	4547	19	FSM	ENSG00000072518.22	ENST00000402010.8	4547	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	66.6033032213869	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTCCTCCTGTTTCTT	63834563	True	NA	15	True	AATAAA	-20	NA	63839109	63911020	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63839561_63895158_63895339_63895579_63895634_63898231_63898281_63898607_63898674_63898762_63898834_63899051_63899109_63899873_63900111_63900558_63900679_63900779_63900880_63900956_63901070_63902197_63902331_63902600_63902783_63903060_63903159_63903985_63904148_63904785_63905044_63906087_63906115_63908259_63908305_63908876
transcript_34873.known	chr11	+	4560	18	FSM	ENSG00000072518.22	ENST00000377810.8	4560	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	65.2063533109369	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCCTCCTCCTGTTTCT	63838907	True	NA	14	True	AATAAA	-19	NA	63838927	63911019	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63839561_63895158_63895339_63895579_63895634_63898231_63898281_63898607_63898674_63898762_63898834_63899051_63899109_63899873_63900111_63900558_63900679_63900779_63900880_63900956_63901070_63902197_63902331_63902603_63902783_63903060_63903133_63904097_63904148_63904785_63905044_63908259_63908305_63908876
transcript_34874.nic	chr11	+	3311	18	NIC	ENSG00000072518.22	novel	4547	19	NA	NA	-71	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	60.9388484679121	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAAAAAAATCC	NA	False	NA	NA	False	AAAAAG	-1	NA	63838856	63909579	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_63839561_63895158_63895339_63895579_63895634_63898231_63898281_63898607_63898674_63898762_63898834_63899051_63899109_63899873_63900111_63900558_63900679_63900779_63900880_63900956_63901070_63902197_63902331_63902603_63902783_63903060_63903159_63903985_63904148_63904785_63905044_63906087_63906115_63908876
transcript_34876.known	chr11	+	2666	18	FSM	ENSG00000072518.22	ENST00000513765.7	2666	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	61.4474766572497	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACTGCGGTTGCACAGAG	63839452	False	NA	NA	False	NA	NA	NA	63839463	63909520	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63839561_63895158_63895339_63895579_63895634_63898231_63898281_63898607_63898674_63898762_63898834_63899051_63899109_63899873_63900111_63900558_63900679_63900779_63900880_63900956_63901070_63902197_63902331_63902600_63902783_63903060_63903159_63903985_63904148_63904785_63905044_63908259_63908305_63908876
transcript_34879.nic	chr11	+	3030	18	NIC	ENSG00000072518.22	novel	2885	18	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	2	47	junction_16	49.377228827098	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAGAAAAAAA	63838946	True	NA	NA	False	AAGAAA	-13	NA	63839014	63909573	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_63839561_63895158_63895339_63895579_63895634_63898231_63898281_63898607_63898674_63898762_63898834_63899051_63899109_63899873_63900111_63900558_63900679_63900779_63900880_63900956_63901070_63902197_63902331_63902603_63902783_63903060_63903159_63904785_63905044_63906087_63906115_63908259_63908305_63908876
transcript_34890.known	chr11	+	2862	18	FSM	ENSG00000072518.22	ENST00000509502.6	2862	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	64.3761652899538	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGGTGGGAGATTGTTCT	63888354	True	NA	NA	False	NA	NA	NA	63888546	63909398	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63888965_63895158_63895339_63895579_63895634_63898231_63898281_63898607_63898674_63898762_63898834_63899051_63899109_63899873_63900111_63900558_63900679_63900779_63900880_63900956_63901070_63902197_63902331_63902603_63902783_63903060_63903159_63903985_63904148_63904785_63905044_63908259_63908305_63908876
transcript_34893.known	chr11	+	2379	17	FSM	ENSG00000072518.22	ENST00000425897.3	2379	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	61.3870914769547	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGCGGGGGCGGCGGGGGC	63839395	False	NA	NA	False	NA	NA	NA	63839429	63909247	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63839561_63895158_63895339_63895579_63895634_63898231_63898281_63898607_63898674_63898762_63898834_63899051_63899109_63899873_63900111_63900558_63900679_63900779_63900880_63900956_63901070_63902197_63902331_63902603_63902783_63903060_63903159_63903985_63904148_63904785_63905044_63908876
transcript_34894.known	chr11	+	2502	17	FSM	ENSG00000072518.22	ENST00000679216.1	2502	17	0	0	0	0	multi-exon	FALSE	canonical	2	37	junction_16	51.9506977816468	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTTCGCCTAAACCAAGA	63839452	False	NA	NA	False	NA	NA	NA	63839463	63909539	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63839561_63895158_63895339_63895579_63895634_63898231_63898281_63898607_63898674_63898762_63898834_63899051_63899109_63899873_63900111_63900558_63900679_63900779_63900880_63900956_63901070_63902197_63902331_63902603_63902783_63903060_63903159_63904785_63905044_63906087_63906115_63908876
transcript_34895.known	chr11	+	2924	17	FSM	ENSG00000072518.22	ENST00000508192.5	2924	17	0	0	0	0	multi-exon	FALSE	canonical	2	72	junction_14	37.8408984268344	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGGAGGGTGGATGGGGG	63838990	False	NA	NA	False	NA	NA	NA	63839004	63909484	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63839561_63895158_63895339_63895579_63895634_63898231_63898281_63898607_63898674_63898762_63898834_63899051_63899109_63899873_63900111_63900558_63900679_63900779_63900880_63900956_63901070_63902197_63902331_63902603_63902783_63903060_63903159_63904785_63905044_63908259_63908305_63908876
transcript_349.nic	chr1	+	2486	16	NIC	ENSG00000187583.11	novel	3176	16	NA	NA	-31	100	combination_of_known_junctions	TRUE	canonical	1	3	junction_1	2.98142396999972	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAAGAGAGAGAGGAGA	966244	False	NA	-11	True	AAGAAA	-4	NA	966450	975108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_966615_966703_966804_970276_970424_970520_970602_970685_970759_970878_971007_971076_971209_971323_971405_972074_972151_972287_972425_972860_973011_973185_973327_973499_973641_973832_974052_974315_974365_974441
transcript_34905.known	chr11	+	2903	16	FSM	ENSG00000072518.22	ENST00000350490.11	2903	16	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_15	51.6317731634311	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGCGGCCACCTTTCCT	63834546	True	NA	NA	False	AAAAAG	-18	NA	63839092	63909596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63839561_63895158_63895339_63895579_63895634_63898231_63898281_63898607_63898674_63898762_63898834_63899051_63899109_63899873_63900111_63900558_63900679_63900779_63900880_63900956_63901070_63902197_63902331_63902603_63902783_63903060_63903159_63904785_63905044_63908876
transcript_34928.known	chr11	-	2915	12	FSM	ENSG00000167771.6	ENST00000301459.5	2915	12	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_5	18.0527235188013	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTACTGAGTTTTCTTTCC	-63913489	True	NA	-10	True	AATAAA	-7	NA	63917164	63911229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_63912180_63912304_63912535_63912675_63912734_63912869_63912948_63913953_63914170_63914260_63914331_63914416_63914542_63914654_63914817_63914901_63914955_63915177_63915259_63915554_63915612_63916329
transcript_34936.known	chr11	+	3649	8	FSM	ENSG00000110583.13	ENST00000377793.9	3649	8	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	22.8749930299978	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGAGATGGCTTCCTG	63936492	True	NA	11	True	AATAAA	-15	NA	63939001	63957319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63939103_63945839_63945936_63946950_63947004_63952237_63952334_63952406_63952566_63952755_63952840_63953971_63954050_63954337
transcript_34940.known	chr11	+	1035	8	FSM	ENSG00000110583.13	ENST00000542163.1	1035	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	58.9354541435123	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTTTCCTCTTTCCTGGT	63939195	True	NA	NA	False	NA	NA	NA	63939247	63954519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63939535_63945839_63945936_63946950_63947004_63952237_63952334_63952406_63952566_63952755_63952840_63953971_63954050_63954337
transcript_34942.known	chr11	+	958	7	FSM	ENSG00000110583.13	ENST00000534965.5	958	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	56.1129812669641	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGAATGAAAGGGAGAGGG	63936486	True	NA	NA	False	NA	NA	NA	63938995	63954675	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63939103_63945839_63945936_63952237_63952334_63952406_63952566_63952755_63952840_63953971_63954050_63954337
transcript_34945.known	chr11	+	4707	7	FSM	ENSG00000110583.13	ENST00000338447.10	4707	7	0	0	0	0	multi-exon	TRUE	canonical	3	142	junction_6	18.9861060310487	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGAGATGGCTTCCTG	63936449	True	NA	11	True	AATAAA	-15	NA	63938958	63957319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63939103_63945839_63947004_63952237_63952334_63952406_63952566_63952755_63952840_63953971_63954050_63954337
transcript_34952.nic	chr11	-	1221	11	NIC	ENSG00000133315.12	novel	1257	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_3	93.153690211392	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTACTGTCTGAGCTCT	-64162898	True	NA	-6	True	AATAAA	-16	NA	64166113	63998557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_63998688_63998837_63998873_63998954_63999001_63999330_63999405_63999529_63999561_63999641_63999764_64000226_64000344_64015251_64015282_64151238_64151356_64152291_64152394_64165696
transcript_34953.known	chr11	-	1257	11	FSM	ENSG00000133315.12	ENST00000255681.7	1257	11	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_8	34.035863438438	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTACTGTCTGAGCTCT	-64162898	True	NA	-6	True	AATAAA	-16	NA	64166113	63998557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_63998688_63998837_63998873_63998954_63999037_63999330_63999405_63999529_63999561_63999641_63999764_64000226_64000344_64015251_64015282_64151238_64151356_64152291_64152394_64165696
transcript_34957.nnic	chr11	-	1910	11	NNC	ENSG00000133315.12	novel	1257	11	NA	NA	-493	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_3	96.5281824132206	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTACTGTCTGAGCTCT	NA	False	NA	-6	True	AATAAA	-16	NA	64166606	63998557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_63998688_63998837_63998873_63998954_63999197_63999330_63999405_63999529_63999561_63999641_63999764_64000226_64000344_64015251_64015282_64151238_64151356_64152291_64152394_64165696
transcript_34961.nic	chr11	-	1962	10	NIC	ENSG00000133315.12	novel	1257	11	NA	NA	-411	0	intron_retention	FALSE	canonical	3	265	junction_7	34.8201729525349	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTACTGTCTGAGCTCT	-64166336	True	NA	-6	True	AATAAA	-16	NA	64166524	63998557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_63998688_63998837_63998873_63998954_63999405_63999529_63999561_63999641_63999764_64000226_64000344_64015251_64015282_64151238_64151356_64152291_64152394_64165696
transcript_34962.known	chr11	-	1214	10	FSM	ENSG00000133315.12	ENST00000675777.1	1214	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	101.181660369168	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCAGCTCCTACTGTC	-64162898	True	NA	-14	True	AATAAA	-8	NA	64166113	63998565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_63998688_63998954_63999037_63999330_63999405_63999529_63999561_63999641_63999764_64000226_64000344_64015251_64015282_64151238_64151356_64152291_64152394_64165696
transcript_34972.nic	chr11	-	3314	4	ISM	ENSG00000133315.12	ENST00000542359.5	459	5	-736	3989	-398	-3989	5prime_fragment	FALSE	canonical	3	265	junction_1	40.4502437844597	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACTAACCATGCTAGCAT	-64166323	True	NA	NA	False	NA	NA	NA	64166511	64013001	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_64015282_64151238_64151356_64152291_64152394_64165696
transcript_34973.nnic	chr11	-	1652	4	NNC	ENSG00000133315.12	novel	1257	11	NA	NA	-411	33365	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	158.565093538549	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTGTTTTCTTGCACT	-64166336	True	NA	NA	False	CATAAA	-27	NA	64166524	64115381	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_64115987_64151238_64151356_64152291_64152394_64165696
transcript_34974.known	chr11	-	868	4	FSM	ENSG00000133315.12	ENST00000538595.1	868	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	156.22490909654	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGGCTTTTCGGGGCTGC	-64162842	True	NA	NA	False	AATAAA	-15	NA	64166057	64148746	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64149035_64151238_64151356_64152291_64152394_64165696
transcript_34975.nic	chr11	-	4523	3	ISM	ENSG00000133315.12	ENST00000542359.5	459	5	-369	138370	-31	1364	5prime_fragment	FALSE	canonical	3	318	junction_1	23	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACTCTGAGGCTGCAGG	-64162929	True	NA	NA	False	AAAAAG	-13	NA	64166144	64147382	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_64151356_64152291_64152394_64165696
transcript_34981.known	chr11	+	1259	7	FSM	ENSG00000167770.13	ENST00000543988.1	1259	7	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_1	739.587497640858	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGCTTCGTTGGGTTC	63986657	True	NA	NA	False	NA	NA	NA	63986841	63997850	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63987039_63988336_63988399_63988653_63988753_63996529_63996649_63996856_63996942_63997049_63997245_63997348
transcript_34987.known	chr11	+	494	2	FSM	ENSG00000176340.4	ENST00000314133.4	494	2	0	0	0	0	multi-exon	FALSE	canonical	3	4013	junction_1	0	1153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGAAATTCATTGTGCC	63926683	True	NA	48	True	AATAAA	-17	NA	63974619	63976543	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63974795_63976224
transcript_34988.known	chr11	+	1701	7	FSM	ENSG00000167770.13	ENST00000538426.6	1701	7	0	0	0	0	multi-exon	FALSE	canonical	3	1801	junction_4	244.811775769785	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGCCGTCCGCCTGTG	63963492	True	NA	26	True	AATAAA	-18	NA	63986437	63998412	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63986515_63988336_63988399_63988653_63988753_63996529_63996649_63996856_63996942_63997049_63997245_63997348
transcript_34989.known	chr11	+	553	4	FSM	ENSG00000167770.13	ENST00000536443.1	553	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	1142.0710232828	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTGTGTGGAAACAGTAT	63963523	True	NA	NA	False	AATAAA	-37	NA	63986468	63990632	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_63986515_63988336_63988399_63988653_63988753_63990286
transcript_3499.known	chr1	-	1015	8	FSM	ENSG00000117118.10	ENST00000375499.8	1015	8	0	0	0	0	multi-exon	FALSE	canonical	3	953	junction_4	43.7539502589801	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTGTTCCTTTACTTGC	-17044069	True	NA	NA	False	AATAAA	-31	NA	17054032	17018721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_17018959_17022607_17022731_17023972_17024075_17027748_17027866_17028599_17028737_17033059_17033146_17044760_17044889_17053947
transcript_35.known	ERCC-00084	+	978	1	FSM	ERCC-00084A	DQ883682	978	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	978	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00084_+_0_1000
transcript_35003.known	chr11	+	2140	14	FSM	ENSG00000168439.17	ENST00000305218.9	2140	14	0	0	0	0	multi-exon	FALSE	canonical	3	2790	junction_8	227.157844659903	4442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTTGGCCTTGAGTG	64152245	True	NA	21	True	AATAAA	-25	NA	64186170	64204543	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64186271_64193077_64193288_64194188_64194331_64194478_64194621_64195644_64195814_64197270_64197398_64197492_64197596_64197853_64197975_64199939_64200037_64200168_64200294_64202875_64202913_64203124_64203229_64203449_64203623_64204053
transcript_35008.known	chr11	+	1900	14	FSM	ENSG00000168439.17	ENST00000538945.5	1900	14	0	0	0	0	multi-exon	FALSE	canonical	1	98	junction_2	853.988165598475	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTATTTGGGGCA	64152278	True	NA	3	True	NA	NA	NA	64186203	64204408	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64186271_64193077_64193288_64194260_64194331_64194478_64194621_64195644_64195814_64197270_64197398_64197492_64197596_64197853_64197975_64199939_64200037_64200168_64200294_64202875_64202913_64203124_64203229_64203449_64203623_64204053
transcript_3504.known	chr1	-	828	3	FSM	ENSG00000117118.10	ENST00000466613.2	828	3	0	0	0	0	multi-exon	FALSE	canonical	3	993	junction_2	3	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCAATGTATTCATTTTC	-17044068	True	NA	NA	False	NA	NA	NA	17054031	17032529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_17033146_17044760_17044889_17053947
transcript_35041.known	chr11	+	772	5	FSM	ENSG00000168439.17	ENST00000543847.1	772	5	0	0	0	0	multi-exon	FALSE	canonical	3	3174	junction_4	36.6836135079411	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGACATCTGTTGACCTT	64152299	True	NA	NA	False	TATAAA	-24	NA	64186224	64195876	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64186271_64193077_64193288_64194188_64194331_64194478_64194621_64195644
transcript_3505.known	chr1	-	4361	16	FSM	ENSG00000117115.13	ENST00000375486.9	4361	16	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_6	4.65713311908613	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTGTTGGTGTGATGT	-17118983	True	NA	-1	True	AATAAA	-19	NA	17119451	17066760	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_17069278_17070087_17070217_17071405_17071492_17074855_17074950_17075678_17075824_17079263_17079416_17082544_17082653_17083725_17083838_17084598_17084703_17086520_17086700_17092407_17092534_17093566_17093685_17095908_17095971_17102986_17103060_17104877_17105062_17119279
transcript_35054.nic	chr11	-	943	8	NIC	ENSG00000149743.14	novel	968	8	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	159.415386039499	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTTTAAAAAGTAACAAG	NA	False	NA	-59	True	AATAAA	-20	NA	64226249	64223855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_64223968_64224099_64224163_64224284_64224342_64224542_64224718_64224800_64224971_64225498_64225581_64225785_64225870_64226049
transcript_35056.known	chr11	-	968	8	FSM	ENSG00000149743.14	ENST00000317459.11	968	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	130.552515041547	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCATCATCCTGTAGCT	-64222968	True	NA	-19	True	TATAAA	-45	NA	64226186	64223815	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64223968_64224099_64224211_64224284_64224342_64224542_64224718_64224800_64224971_64225498_64225581_64225785_64225870_64226049
transcript_35058.nic	chr11	-	846	8	NIC	ENSG00000149743.14	novel	968	8	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_7	116.964498364038	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTTTAAAAAGTAACAAG	-64223027	True	NA	-59	True	AATAAA	-20	NA	64226245	64223855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_64223968_64224099_64224211_64224284_64224342_64224542_64224718_64224800_64224971_64225498_64225581_64225785_64225870_64226190
transcript_35060.known	chr11	-	941	7	FSM	ENSG00000149743.14	ENST00000541278.5	941	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	175.207496034464	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTACATCTGGTCTTCCTT	NA	False	NA	-3	True	AAAAAG	-44	NA	64226254	64223799	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64223968_64224284_64224342_64224542_64224718_64224800_64224971_64225498_64225581_64225785_64225870_64226049
transcript_35062.known	chr11	-	865	7	FSM	ENSG00000149743.14	ENST00000394547.7	865	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	141.008273988916	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACATCTGGTCTTCCTTG	-64222932	True	NA	-2	True	AAAAAG	-45	NA	64226150	64223798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64223968_64224099_64224211_64224284_64224342_64224542_64224718_64224800_64224971_64225498_64225581_64226049
transcript_35071.nic	chr11	+	1005	6	NIC	ENSG00000149761.9	novel	1110	6	NA	NA	-20	0	combination_of_known_junctions	TRUE	canonical	3	51	junction_1	114.300656166096	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCGTTGGCATCTGCTAT	NA	False	NA	36	True	AATAAA	-16	NA	64226247	64230015	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_64226298_64226634_64227133_64227567_64227667_64229246_64229345_64229477_64229572_64229849
transcript_35072.known	chr11	+	1110	6	FSM	ENSG00000149761.9	ENST00000279206.8	1110	6	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_2	43.2222165095683	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCGTTGGCATCTGCTATT	64221307	True	NA	37	True	AATAAA	-17	NA	64226273	64230016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64226428_64226634_64227133_64227567_64227667_64229246_64229345_64229477_64229572_64229849
transcript_35079.known	chr11	-	1726	6	FSM	ENSG00000149743.14	ENST00000539436.5	1726	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	143.344898758205	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGTTTGAAACCATGTTTC	-64223011	True	NA	-33	True	TATAAA	-31	NA	64226229	64223829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64223968_64224099_64224211_64224284_64224718_64224800_64225581_64225785_64225870_64226049
transcript_35083.nic	chr11	+	906	5	NIC	ENSG00000149761.9	novel	986	5	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	146.547560539232	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCGTTGGCATCTGCTAT	NA	False	NA	36	True	AATAAA	-16	NA	64226247	64230015	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_64226298_64226634_64227133_64229246_64229345_64229477_64229572_64229849
transcript_35086.known	chr11	+	986	5	FSM	ENSG00000149761.9	ENST00000441250.6	986	5	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	115.285244068788	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTGGATTCCGTTGGCA	64221323	True	NA	28	True	AATAAA	-8	NA	64226289	64230007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64226428_64226634_64227133_64229246_64229345_64229477_64229572_64229849
transcript_3510.known	chr1	-	1607	11	FSM	ENSG00000117115.13	ENST00000375481.1	1607	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	5.13906606301184	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGGTGTATAATGAGATT	-17118967	False	NA	NA	False	AATAAA	-20	NA	17119435	17079030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_17079416_17082544_17082653_17083725_17083838_17084598_17084703_17086520_17086700_17092407_17092534_17093566_17093685_17095908_17095971_17102986_17103060_17104877_17105062_17119279
transcript_35109.known	chr11	+	2055	2	FSM	ENSG00000149761.9	ENST00000422364.2	2055	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAGGAGTAAGTGGGAG	64221308	True	NA	NA	False	AAAAAG	-8	NA	64226274	64228986	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64227915_64228571
transcript_35110.known	chr11	+	1015	5	FSM	ENSG00000110011.14	ENST00000321460.5	1015	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	69.9160210538329	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGTGTCCGGCTCCCTCC	64230727	False	NA	13	True	AATAAA	-13	NA	64230757	64234281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64230941_64231870_64231965_64232429_64232615_64232700_64232866_64233893
transcript_35111.known	chr11	+	1071	3	FSM	ENSG00000149761.9	ENST00000535000.1	1071	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	162	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTCTGAAAATAATAAACGA	64221323	True	NA	4	True	NA	NA	NA	64226289	64229983	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64227133_64229477_64229572_64229849
transcript_35113.known	chr11	+	574	6	FSM	ENSG00000173486.14	ENST00000309366.9	574	6	0	0	0	0	multi-exon	FALSE	canonical	3	737	junction_1	224.085162382519	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTAAGCCTGTGTGTGTT	64226090	True	NA	18	True	AAAACA	-39	NA	64241094	64244132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64241133_64242383_64242559_64243198_64243312_64243450_64243498_64243840_64243877_64243967
transcript_35114.nnic	chr11	+	679	6	NNC	ENSG00000173486.14	novel	574	6	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	canonical	3	152	junction_1	449.845484583318	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTAAGCCTGTGTGTGTT	64225950	True	NA	18	True	AAAACA	-39	NA	64240954	64244132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_64241133_64242418_64242559_64243198_64243312_64243450_64243498_64243840_64243877_64243967
transcript_35115.known	chr11	+	1655	6	FSM	ENSG00000286264.2	ENST00000652762.2	1655	6	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	445.521985989468	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTAAGCCTGTGTGTGTT	64226090	True	NA	18	True	AAAACA	-39	NA	64241094	64244132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64242214_64242383_64242559_64243198_64243312_64243450_64243498_64243840_64243877_64243967
transcript_35117.known	chr11	+	613	6	FSM	ENSG00000173486.14	ENST00000449942.6	613	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	493.549187011791	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAAGGAGTAAGCCTGTG	64226151	False	NA	12	True	AAAACA	-33	NA	64241155	64244126	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64241239_64242383_64242559_64243198_64243312_64243450_64243498_64243840_64243877_64243967
transcript_3512.known	chr1	+	3189	16	FSM	ENSG00000142619.4	ENST00000375460.3	3189	16	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	2.21710521977545	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGGCTCTCATGTTGA	17248866	True	NA	28	True	AATAAA	-17	NA	17249097	17284233	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_17249230_17259577_17259759_17262132_17262206_17265658_17265721_17266718_17266837_17267836_17267963_17270232_17270412_17270878_17270983_17271066_17271179_17273339_17273448_17274634_17274787_17276518_17276664_17276773_17276877_17280349_17280430_17280670_17280797_17282845
transcript_35126.nnic	chr11	-	3275	7	NNC	ENSG00000173457.11	novel	989	4	NA	NA	-4474	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_6	2615.97557752786	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGCTCGGCTGGTCTCTT	-64250599	False	818	-6	True	AATAAA	-27	NA	64251417	64244479	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_64244823_64244929_64244963_64245203_64245288_64246415_64246581_64248049_64248173_64248400_64248599_64249088
transcript_35127.nnic	chr11	-	2980	7	NNC	ENSG00000173457.11	novel	989	4	NA	NA	-4474	0	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_4	2608.56720996199	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGCTCGGCTGGTCTCTT	-64250599	False	818	-6	True	AATAAA	-27	NA	64251417	64244479	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_64244823_64244929_64244963_64245203_64245288_64246415_64246581_64248049_64248173_64248400_64248599_64249383
transcript_35133.known	chr11	+	431	2	FSM	ENSG00000256940.3	ENST00000538355.1	431	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAGATTAAATAGGAAAA	64246840	True	NA	-14	True	AATGAA	-39	NA	64247053	64248177	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64247260_64247952
transcript_35134.known	chr11	+	533	2	FSM	ENSG00000256940.3	ENST00000663760.2	551	2	5	13	5	-13	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCGTGGAAAGTTCAATTAC	64245908	False	NA	6	True	ATTAAA	-9	NA	64245960	64248197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64246249_64247952
transcript_35136.known	chr11	+	4469	32	FSM	ENSG00000149782.13	ENST00000540288.5	4469	32	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_31	86.048143724903	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCCTCTGCTGCTCCC	64244583	True	NA	NA	False	NA	NA	NA	64251546	64269150	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64251749_64254414_64254493_64254747_64254817_64254897_64255039_64255233_64255314_64255395_64255450_64255540_64255617_64255720_64255822_64256375_64256543_64256617_64256765_64258472_64258714_64258884_64258970_64259057_64259245_64260028_64260235_64261399_64261497_64261580_64261666_64261951_64262077_64262406_64262562_64262646_64262809_64263497_64263598_64263690_64263796_64264020_64264113_64264950_64265105_64265191_64265228_64265309_64265503_64265885_64266040_64266125_64266203_64266314_64266405_64266494_64266553_64267184_64267272_64267352_64267571_64268503
transcript_3514.nnic	chr1	+	2940	14	NIC	ENSG00000142619.4	novel	3189	16	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	3.29424817005598	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGGCTCTCATGTTGA	17248861	True	NA	28	True	AATAAA	-17	NA	17249092	17284233	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_17249230_17265658_17265721_17266718_17266837_17267836_17267963_17270232_17270412_17270878_17270983_17271066_17271179_17273339_17273448_17274634_17274787_17276518_17276664_17276773_17276877_17280349_17280430_17280670_17280797_17282845
transcript_35144.known	chr11	+	4192	31	FSM	ENSG00000149782.13	ENST00000279230.12	4192	31	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_11	49.7424031050639	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTGTGCAGTGTGATTT	64244566	True	NA	15	True	AATAAA	-16	NA	64251529	64267923	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64251749_64254414_64254493_64254747_64254817_64254897_64255039_64255233_64255314_64255395_64255450_64255540_64255617_64255720_64255822_64256375_64256543_64256617_64256765_64258472_64258714_64258884_64258970_64259057_64259245_64260028_64260235_64261399_64261497_64261580_64261666_64261951_64262077_64262406_64262562_64262646_64262809_64263497_64263598_64263690_64263796_64264020_64264113_64264950_64265105_64265191_64265228_64265309_64265503_64265885_64266040_64266125_64266203_64266314_64266405_64266494_64266553_64267184_64267272_64267352
transcript_35178.known	chr11	+	3946	29	FSM	ENSG00000149782.13	ENST00000325234.5	3946	29	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	89.9321385313189	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTGTGCAGTGTGATTT	64244611	True	NA	15	True	AATAAA	-16	NA	64251574	64267923	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64251749_64254951_64255039_64255233_64255314_64255395_64255450_64255540_64255617_64255720_64255822_64256375_64256543_64256617_64256765_64258472_64258714_64258884_64258970_64259057_64259245_64260028_64260235_64261399_64261497_64261580_64261666_64261951_64262077_64262406_64262562_64262646_64262809_64263497_64263598_64263690_64263796_64264020_64264113_64264950_64265105_64265191_64265228_64265309_64265503_64265885_64266040_64266125_64266203_64266314_64266405_64266494_64266553_64267184_64267272_64267352
transcript_35202.nic	chr11	+	2091	8	NIC	ENSG00000173264.15	novel	2166	7	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	52.1109491413097	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGCACCTGTCTGTCAT	NA	False	NA	17	True	AATAAA	-19	NA	64284793	64289494	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_64285381_64286509_64286882_64286964_64287015_64287720_64287947_64288064_64288215_64288339_64288469_64288602_64288722_64289036
transcript_35203.nic	chr11	+	1982	8	NIC	ENSG00000173264.15	novel	1485	7	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	63.4681343796448	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTGTGCACCTGTCTGT	NA	False	NA	14	True	AATAAA	-16	NA	64284793	64289491	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_64285381_64286509_64286882_64286964_64287015_64287720_64287947_64288064_64288215_64288339_64288469_64288602_64288722_64289142
transcript_35209.nnic	chr11	+	1913	8	NNC	ENSG00000173264.15	novel	2166	7	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	58.9891031099328	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGCACCTGTCTGTCAT	64285598	False	NA	17	True	AATAAA	-19	NA	64285825	64289494	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_64286235_64286509_64286882_64286964_64287015_64287720_64287947_64288064_64288215_64288339_64288469_64288602_64288722_64289036
transcript_35213.known	chr11	+	1478	7	FSM	ENSG00000173264.15	ENST00000377702.8	1478	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	71.1164928519085	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGCACCTGTCTGTCAT	64284644	False	NA	17	True	AATAAA	-19	NA	64285256	64289494	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64285381_64286509_64286882_64286964_64287015_64287720_64287947_64288339_64288469_64288602_64288722_64289036
transcript_35215.known	chr11	+	2166	7	FSM	ENSG00000173264.15	ENST00000438980.7	2166	7	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_6	26.8850433430105	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGCACCTGTCTGTCAT	64284882	True	NA	17	True	AATAAA	-19	NA	64285847	64289494	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64286882_64286964_64287015_64287720_64287947_64288064_64288215_64288339_64288469_64288602_64288722_64289036
transcript_35216.known	chr11	+	1485	7	FSM	ENSG00000173264.15	ENST00000313074.7	1485	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_6	52.2230791891861	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTGTGCACCTGTCTGT	64285454	False	NA	14	True	AATAAA	-16	NA	64286419	64289491	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64286882_64286964_64287015_64287720_64287947_64288064_64288215_64288339_64288469_64288602_64288722_64289142
transcript_35232.known	chr11	-	631	5	FSM	ENSG00000002330.14	ENST00000394531.3	631	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	149.300870727535	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGGATCGGAACTTGGGC	-64281356	True	NA	NA	False	NA	NA	NA	64284653	64270255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64270338_64271612_64271804_64276903_64277044_64284181_64284377_64284630
transcript_35238.known	chr11	-	929	4	FSM	ENSG00000002330.14	ENST00000309032.8	929	4	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_3	53.8784640546563	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTTTTCTGTGCGTCGA	-64281368	True	NA	-3	True	AATAAA	-19	NA	64284665	64269829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64270338_64271612_64271804_64284181_64284377_64284630
transcript_35241.known	chr11	-	1157	3	FSM	ENSG00000002330.14	ENST00000394532.7	1157	3	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_2	14.5	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTTTTCTGTGCGTCGA	-64281342	True	NA	-3	True	AATAAA	-19	NA	64284639	64269829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64270338_64271612_64271804_64284181
transcript_35243.known	chr11	+	971	5	FSM	ENSG00000182450.13	ENST00000453423.5	971	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	1.87082869338697	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCAGCCACTGCTGCCTC	64290454	False	NA	NA	False	NA	NA	NA	64291419	64299440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64291567_64296877_64297280_64297466_64297654_64298109_64298250_64299345
transcript_35252.known	chr11	+	2266	7	FSM	ENSG00000173153.17	ENST00000677967.1	2266	7	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_4	128.464867657357	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACACTGTGTTTGGTGT	64302012	True	NA	18	True	AATATA	-14	NA	64305523	64316738	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64305737_64307167_64307505_64313950_64314068_64314238_64314368_64314743_64314912_64315000_64315271_64315706
transcript_35256.known	chr11	+	2283	7	FSM	ENSG00000173153.17	ENST00000405666.5	2283	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	129.851196888336	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGTTTGGTGTCATTG	64305916	True	NA	23	True	AATATA	-19	NA	64306226	64316743	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64306449_64307167_64307505_64313950_64314068_64314238_64314368_64314740_64314912_64315000_64315271_64315706
transcript_35267.known	chr11	-	561	4	FSM	ENSG00000173113.7	ENST00000308774.6	561	4	0	0	0	0	multi-exon	TRUE	canonical	3	80	junction_2	2307.57727690513	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCGGTTTCTCTTTGCA	-64254771	True	NA	-11	True	ATTAAA	-12	NA	64317558	64316694	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64316969_64317057_64317133_64317263_64317366_64317448
transcript_35268.known	chr11	-	659	3	FSM	ENSG00000173113.7	ENST00000539854.1	659	3	0	0	0	0	multi-exon	FALSE	canonical	3	4956	junction_2	99.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAAGCGGTTTCTCTTTGC	-64254766	True	NA	-12	True	ATTAAA	-11	NA	64317553	64316695	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64317148_64317263_64317366_64317448
transcript_35269.known	chr11	-	704	2	FSM	ENSG00000173113.7	ENST00000535126.1	704	2	0	0	0	0	multi-exon	FALSE	canonical	3	5155	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGTTTCTCTTTGCAGCAA	-64254723	True	NA	-7	True	ATTAAA	-16	NA	64317510	64316690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64317148_64317263
transcript_3527.known	chr1	-	4040	13	FSM	ENSG00000179051.14	ENST00000375436.9	4040	13	0	0	0	0	multi-exon	FALSE	canonical	3	1233	junction_12	184.315004363002	1668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGATTTTGCATTTCTTTT	-17417342	True	NA	-11	True	AATAAA	-21	NA	17439677	17406759	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_17409195_17409973_17410052_17412121_17412195_17413072_17413179_17413536_17413718_17416479_17416647_17420713_17420829_17422202_17422292_17422704_17422837_17425540_17425685_17429105_17429200_17438229_17438523_17439544
transcript_35271.known	chr11	+	860	6	FSM	ENSG00000126432.14	ENST00000265462.9	860	6	0	0	0	0	multi-exon	FALSE	canonical	3	2920	junction_3	297.362136123616	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTGGTTATGAATGGC	64291263	True	NA	18	True	AATAAA	-20	NA	64318120	64321811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64318387_64319733_64319869_64320660_64320793_64320864_64320904_64321006_64321069_64321585
transcript_35273.known	chr11	+	596	5	FSM	ENSG00000126432.14	ENST00000352435.8	596	5	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_2	1468.75551062796	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGCTGGGGCCCTGC	64291324	True	NA	-53	True	NA	NA	NA	64318181	64321740	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64318387_64319733_64319869_64320864_64320904_64321006_64321069_64321585
transcript_35274.nnic	chr11	+	808	5	NIC	ENSG00000126432.14	novel	860	6	NA	NA	-83	0	combination_of_known_splicesites	FALSE	canonical	3	269	junction_1	1402.86142847396	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTGGTTATGAATGGC	64317921	False	NA	18	True	AATAAA	-20	NA	64318037	64321811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_64318387_64320660_64320793_64320864_64320904_64321006_64321069_64321585
transcript_35275.known	chr11	+	463	4	FSM	ENSG00000126432.14	ENST00000347941.4	463	4	0	0	0	0	multi-exon	FALSE	canonical	3	397	junction_1	1548.48657296945	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTGGGGCCCTGCAA	64291324	True	NA	-51	True	NA	NA	NA	64318181	64321742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64318387_64320864_64320904_64321006_64321069_64321585
transcript_35282.nic	chr11	+	3725	14	ISM	ENSG00000168071.22	ENST00000463837.5	5235	25	642	6829	642	0	internal_fragment	FALSE	canonical	2	14	junction_1	5.81571020659563	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACAAAAAAAACCCT	64340576	True	NA	NA	False	NA	NA	NA	64340864	64350695	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_64341019_64341108_64341179_64341269_64341329_64341420_64341505_64341598_64341743_64341993_64342140_64342293_64342376_64342521_64342681_64343178_64343326_64343506_64343616_64343777_64343915_64343996_64345158_64349330_64349459_64349550
transcript_35291.known	chr11	+	779	2	FSM	ENSG00000168071.22	ENST00000472524.1	779	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTCTTGCTCTGTCTGTT	64355296	False	NA	10	True	AATAAA	-18	NA	64355342	64357531	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64355629_64357038
transcript_35293.known	chr11	+	2532	17	FSM	ENSG00000162302.13	ENST00000528355.5	2532	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	15.9038861210083	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCTGGGGAGTGGGGT	64358276	True	NA	NA	False	NA	NA	NA	64359181	64371685	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64359291_64359377_64359404_64360162_64360382_64360476_64360593_64361133_64361242_64361468_64361550_64361641_64361746_64361851_64362003_64365300_64365466_64368131_64368261_64368467_64368602_64368703_64368798_64369445_64369620_64369698_64369894_64370224_64370385_64370562_64370727_64371282
transcript_35297.known	chr11	+	2114	17	FSM	ENSG00000162302.13	ENST00000530504.1	2114	17	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	15.3663593606293	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAAGCGGCGGAAGCAGA	64358378	False	NA	NA	False	NA	NA	NA	64359283	64371341	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64359291_64359377_64359450_64360162_64360382_64360476_64360593_64361133_64361242_64361468_64361550_64361641_64361746_64361851_64362003_64365300_64365466_64368131_64368261_64368485_64368602_64368703_64368798_64369445_64369620_64369698_64369894_64370224_64370385_64370562_64370727_64371282
transcript_35298.known	chr11	+	3121	17	FSM	ENSG00000162302.13	ENST00000528057.5	3121	17	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_10	13.7111667537814	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGTGTCCTCGTTCGTG	64358242	True	NA	25	True	AATAAA	-26	NA	64359147	64372215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64359291_64359377_64359450_64360162_64360382_64360476_64360593_64361133_64361242_64361468_64361550_64361641_64361746_64361851_64362003_64365300_64365466_64368131_64368261_64368488_64368602_64368703_64368798_64369445_64369620_64369698_64369894_64370224_64370385_64370562_64370727_64371282
transcript_35299.nic	chr11	+	3077	17	NIC	ENSG00000162302.13	novel	3128	17	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_7	13.1932748019588	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGTGTCCTCGTTCGTG	64358252	True	NA	25	True	AATAAA	-26	NA	64359157	64372215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_64359291_64359377_64359450_64360162_64360382_64360476_64360593_64361133_64361242_64361468_64361550_64361641_64361746_64361906_64362003_64365300_64365466_64368131_64368261_64368467_64368602_64368703_64368798_64369445_64369620_64369698_64369894_64370224_64370385_64370562_64370727_64371282
transcript_35316.known	chr11	+	2340	2	FSM	ENSG00000181908.5	ENST00000316124.3	2340	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGATTTGTCAGCCTCTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	64449073	64451657	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64449653_64449896
transcript_35324.nic	chr11	-	2955	17	NIC	ENSG00000068831.19	novel	2268	17	NA	NA	107	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_12	53.697321569609	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCAGCGCCTAGAATCCC	-64743659	False	NA	-1	True	AATAAA	-24	NA	64743682	64726910	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_64727132_64727295_64727361_64728862_64729043_64729761_64729799_64730052_64730195_64735111_64735228_64735541_64735665_64735902_64735981_64736752_64737035_64739359_64739477_64739635_64739810_64740012_64740164_64740367_64740450_64740947_64741080_64741438_64741502_64742009_64742113_64742793
transcript_35325.known	chr11	-	2221	17	FSM	ENSG00000068831.19	ENST00000377497.7	2221	17	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_12	50.6843402221041	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCAGCGCCTAGAATCCC	-64744623	True	NA	-1	True	AATAAA	-24	NA	64744834	64726910	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64727132_64727295_64727361_64728862_64729043_64729761_64729799_64730052_64730195_64735111_64735228_64735541_64735665_64735902_64735981_64736752_64737035_64739359_64739477_64739635_64739810_64740012_64740164_64740947_64741080_64741438_64741502_64742009_64742113_64742793_64742938_64744741
transcript_35326.known	chr11	-	2310	17	FSM	ENSG00000068831.19	ENST00000354024.7	2310	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	52.8162720546424	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCAGCGCCTAGAATCCC	NA	False	NA	-1	True	AATAAA	-24	NA	64745456	64726910	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64727132_64727295_64727361_64728862_64729043_64729761_64729799_64730052_64730195_64735111_64735228_64735541_64735665_64735902_64735981_64736752_64737035_64739359_64739477_64739635_64739810_64740012_64740164_64740947_64741080_64741438_64741502_64742009_64742113_64742793_64742938_64745274
transcript_35328.nic	chr11	-	3354	16	ISM	ENSG00000068831.19	ENST00000394432.8	2268	17	-21	0	-18	0	intron_retention	FALSE	canonical	3	26	junction_12	52.1542157665344	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCAGCGCCTAGAATCCC	-64744140	False	NA	-1	True	AATAAA	-24	NA	64744163	64726910	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_64727132_64727295_64727361_64728862_64729043_64729761_64729799_64730052_64730195_64735111_64735228_64735541_64735665_64735902_64735981_64736752_64737035_64739359_64739477_64739635_64739810_64740012_64740164_64740947_64741080_64741438_64741502_64742009_64742113_64742793
transcript_35333.known	chr11	-	642	5	FSM	ENSG00000068831.19	ENST00000377487.5	642	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	52.7873090808766	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGAGGGTCATGTTGCT	-64744648	True	NA	-1	True	AATAAA	-17	NA	64744859	64740865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64741080_64741438_64741502_64742009_64742113_64742793_64742938_64744741
transcript_35335.known	chr11	-	583	5	FSM	ENSG00000068831.19	ENST00000377489.5	583	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	72.6378000768195	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGAGGGTCATGTTGCT	-64745310	True	NA	-1	True	AATAAA	-17	NA	64745333	64740865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64741080_64741438_64741502_64742009_64742113_64742793_64742938_64745274
transcript_35337.known	chr11	-	444	4	FSM	ENSG00000068831.19	ENST00000394428.5	444	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	78.0185163207356	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGAGGGTCATGTTGCT	-64741349	True	NA	-1	True	AATAAA	-17	NA	64742937	64740865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64741080_64741438_64741502_64742009_64742033_64742793
transcript_35338.known	chr11	-	2174	4	FSM	ENSG00000068831.19	ENST00000394430.5	2174	4	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_3	5.90668171555645	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTGAGGGTCATGTTG	-64744566	False	NA	-3	True	AATAAA	-15	NA	64744589	64740867	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64741080_64741438_64741502_64742009_64742113_64742793
transcript_35340.known	chr11	-	2866	20	FSM	ENSG00000068976.14	ENST00000164139.4	2866	20	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_17	5.26631484267326	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCTTACTCCTCTTTGT	-64759355	True	NA	-10	True	AATAAA	-17	NA	64759974	64746397	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64746809_64746920_64746988_64747223_64747359_64750375_64750584_64751324_64751467_64751596_64751656_64751923_64752072_64752402_64752505_64753072_64753188_64753518_64753683_64753878_64754026_64754252_64754346_64754692_64754837_64755272_64755356_64755446_64755559_64757778_64757911_64758245_64758350_64758436_64758516_64758602_64758705_64759655
transcript_35347.known	chr11	-	3094	14	FSM	ENSG00000168066.21	ENST00000334944.9	3094	14	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	204.638662643501	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTCTTTATTTTCTTT	-64778770	False	NA	-22	True	AATAAA	-22	NA	64778786	64764605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64765519_64765950_64766156_64766899_64767080_64767191_64767252_64767570_64767845_64768105_64768287_64769021_64769130_64769222_64769339_64769425_64769610_64769963_64770054_64770255_64770409_64773429_64773506_64776497_64776627_64778361
transcript_35350.nic	chr11	-	3041	14	NIC	ENSG00000168066.21	novel	3094	14	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_13	277.715170590898	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTCTTTATTTTCTTT	-64778762	False	NA	-22	True	AATAAA	-22	NA	64778778	64764605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_64765519_64766899_64767080_64767191_64767252_64767570_64767845_64768105_64768287_64769021_64769130_64769222_64769339_64769425_64769610_64769963_64770054_64770255_64770409_64773429_64773506_64776497_64776627_64777986_64778147_64778361
transcript_35352.nic	chr11	-	3673	14	NIC	ENSG00000168066.21	novel	3631	13	NA	NA	8	0	intron_retention	FALSE	canonical	3	39	junction_13	260.897744597562	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTCTGCTTCTTTATTT	-64778762	False	NA	-27	True	AATAAA	-17	NA	64778778	64764610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_64766156_64766899_64767080_64767191_64767252_64767570_64767845_64768105_64768287_64769021_64769130_64769222_64769339_64769425_64769610_64769963_64770054_64770255_64770409_64773429_64773506_64776497_64776627_64777986_64778147_64778361
transcript_35357.known	chr11	-	2854	13	FSM	ENSG00000168066.21	ENST00000377394.7	2854	13	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	241.094840720871	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTCTTTATTTTCTTT	-64778731	False	NA	-22	True	AATAAA	-22	NA	64778747	64764605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64765519_64766899_64767080_64767191_64767252_64767566_64767845_64768105_64768287_64769021_64769130_64769222_64769339_64769425_64769610_64769963_64770054_64770255_64770409_64773429_64773506_64776497_64776627_64778361
transcript_35362.known	chr11	-	2317	13	FSM	ENSG00000168066.21	ENST00000433274.6	2317	13	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_12	225.320080971246	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGGAACGGGCAGGTGG	-64777744	False	118	NA	False	NA	NA	NA	64777760	64765651	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64766156_64766899_64767080_64767191_64767252_64767570_64767845_64768105_64768287_64769021_64769130_64769222_64769339_64769425_64769610_64769963_64770054_64770255_64770409_64773429_64773506_64776497_64776627_64777498
transcript_35363.known	chr11	-	3282	13	FSM	ENSG00000168066.21	ENST00000377390.8	3282	13	0	0	0	0	multi-exon	FALSE	canonical	3	435	junction_1	106.613658703856	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTCTTTATTTTCTTT	-64762499	True	NA	-22	True	AATAAA	-22	NA	64778542	64764605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64766156_64766899_64767080_64767191_64767252_64767570_64767845_64768105_64768287_64769021_64769130_64769222_64769339_64769425_64769610_64769963_64770054_64770255_64770409_64773429_64773506_64776497_64776627_64778361
transcript_35367.known	chr11	-	2778	12	FSM	ENSG00000168066.21	ENST00000448404.5	2778	12	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_10	303.588265107108	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTCTTTATTTTCTTT	-64778731	False	NA	-22	True	AATAAA	-22	NA	64778747	64764605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64765519_64766899_64767080_64767191_64767252_64767566_64767845_64768105_64768287_64769021_64769130_64769222_64769339_64769425_64769610_64769963_64770054_64770255_64770409_64776497_64776627_64778361
transcript_35376.known	chr11	-	983	2	FSM	ENSG00000168066.21	ENST00000463343.1	983	2	0	0	0	0	multi-exon	FALSE	canonical	3	780	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAATGACAAAA	-64778747	False	NA	NA	False	NA	NA	NA	64778763	64776045	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64776627_64778361
transcript_35378.known	chr11	-	2947	13	FSM	ENSG00000168066.21	ENST00000377387.5	2947	13	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_12	231.794569009333	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTCTTTATTTTCTTT	-64778453	False	NA	-22	True	AATAAA	-22	NA	64778469	64764605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64765519_64766899_64767080_64767191_64767252_64767570_64767845_64768105_64768287_64769021_64769130_64769222_64769339_64769425_64769610_64769963_64770054_64770255_64770409_64773429_64773506_64776497_64776627_64777986
transcript_35379.known	chr11	-	2931	32	FSM	ENSG00000168067.12	ENST00000377350.7	2931	32	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_14	17.9941602273983	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTCTGGTCCCTCTGGGT	-64803228	False	4696	-36	True	ATTAAA	-15	NA	64803241	64789136	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64789625_64789729_64789786_64789888_64789960_64790187_64790275_64790393_64790463_64791908_64792087_64792171_64792276_64792363_64792423_64796272_64796391_64796492_64796554_64796633_64796714_64796808_64796894_64796981_64797024_64797103_64797169_64797274_64797381_64797500_64797535_64797625_64797665_64798793_64798838_64799420_64799480_64799604_64799684_64800108_64800217_64800310_64800393_64800763_64800827_64800899_64801032_64801110_64801184_64801578_64801622_64801709_64801758_64802065_64802122_64802418_64802484_64802562_64802654_64802884_64802943_64803053
transcript_35380.known	chr11	-	7147	32	FSM	ENSG00000168067.12	ENST00000294066.7	7147	32	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_10	11.5081295067903	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACCTGTCTTTGTTGGAT	-64803201	False	4696	NA	False	AATAAA	-18	NA	64803214	64784917	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64789625_64789729_64789786_64789888_64789960_64790187_64790275_64790393_64790463_64791908_64792087_64792171_64792276_64792363_64792423_64796272_64796391_64796492_64796554_64796633_64796714_64796808_64796894_64796981_64797024_64797103_64797193_64797274_64797381_64797500_64797535_64797625_64797665_64798793_64798838_64799420_64799480_64799604_64799684_64800108_64800217_64800310_64800393_64800763_64800827_64800899_64801032_64801110_64801184_64801578_64801622_64801709_64801758_64802065_64802122_64802418_64802484_64802562_64802654_64802884_64802943_64803053
transcript_35391.known	chr11	-	2800	11	FSM	ENSG00000133895.18	ENST00000672304.1	2800	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	171.422314766777	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGAATACATTTTGTTAA	-64805855	True	NA	21	True	NA	NA	NA	64810551	64803541	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64804817_64805033_64805199_64805634_64805771_64805887_64806014_64806231_64806369_64807010_64807099_64807178_64807220_64807551_64807681_64807890_64808100_64809664_64810133_64810525
transcript_35413.known	chr11	-	2960	10	FSM	ENSG00000133895.18	ENST00000315422.9	2960	10	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_9	82.9954632108301	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGCGCAAGTCCATGTTT	-64805855	True	NA	-14	True	AATACA	-18	NA	64810551	64803513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64804817_64805033_64805199_64805634_64805771_64806231_64806369_64807010_64807099_64807178_64807220_64807551_64807681_64807890_64808100_64809664_64810133_64810267
transcript_35415.known	chr11	-	2712	10	FSM	ENSG00000133895.18	ENST00000450708.7	2712	10	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_9	102.673159967821	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAGCGCAAGTCCATGT	-64805855	True	NA	-16	True	AATACA	-16	NA	64810551	64803515	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64804817_64805033_64805199_64805634_64805771_64806231_64806369_64807010_64807099_64807178_64807220_64807551_64807681_64807890_64808100_64809664_64810133_64810513
transcript_35416.known	chr11	-	2661	10	FSM	ENSG00000133895.18	ENST00000440873.6	2661	10	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_9	104.835438358422	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCCTGTTTTGTACATA	-64805885	True	NA	-22	True	NA	NA	NA	64810581	64803584	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64804817_64805033_64805199_64805634_64805771_64806231_64806369_64807010_64807099_64807178_64807220_64807551_64807681_64807890_64808100_64809664_64810133_64810525
transcript_35421.known	chr11	-	2614	10	FSM	ENSG00000133895.18	ENST00000377321.5	2614	10	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_7	142.054588707438	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAGCGCAAGTCCATGT	-64805862	True	NA	-16	True	AATACA	-16	NA	64810558	64803515	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64804817_64805033_64805199_64805634_64805771_64806231_64806369_64807010_64807099_64807178_64807220_64807551_64807681_64807995_64808100_64809664_64810133_64810513
transcript_35446.known	chr11	-	2731	10	FSM	ENSG00000133895.18	ENST00000312049.11	2731	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	130.258811696911	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAGCGCAAGTCCATGT	-64810673	True	NA	-16	True	AATACA	-16	NA	64810686	64803515	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64804817_64805033_64805199_64805634_64805771_64806231_64806369_64807010_64807099_64807178_64807220_64807551_64807681_64807890_64808100_64809664_64810133_64810629
transcript_35447.known	chr11	-	6161	37	FSM	ENSG00000171219.9	ENST00000342711.6	6161	37	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_32	8.50145230875435	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGCCTCCTTGCCTGGA	-64844107	True	NA	NA	False	AATAAA	-16	NA	64844653	64823051	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64824530_64826469_64826556_64826670_64826795_64827049_64827168_64827277_64827399_64827526_64827612_64827685_64827784_64829470_64830071_64830193_64830257_64831504_64831722_64832427_64832510_64832603_64832744_64832825_64832960_64833230_64833337_64833599_64833660_64833737_64833837_64833924_64833978_64834265_64834355_64834428_64834578_64834848_64834964_64835046_64835154_64835346_64835420_64835499_64835622_64835761_64835852_64836116_64836297_64836426_64836531_64836738_64836820_64836921_64837020_64838082_64838163_64838653_64838903_64839032_64839234_64839477_64839572_64840119_64840269_64840552_64840649_64841649_64841734_64841812_64841905_64844409
transcript_35454.known	chr11	-	4453	5	FSM	ENSG00000110047.18	ENST00000320631.8	4453	5	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_4	6.89202437604511	285	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGGGTCCTGAAAGCTT	-64874996	True	NA	NA	False	ATTAAA	-21	NA	64878621	64851641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64854858_64855321_64855487_64859923_64860337_64874420_64874519_64878060
transcript_35457.nnic	chr11	-	6332	41	NNC	ENSG00000110046.13	novel	6318	41	NA	NA	-36	0	at_least_one_novel_splicesite	TRUE	canonical	3	13	junction_14	9.82585874109739	28	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCCCTCTCAGATCCTCT	-64916006	True	NA	-13	True	AATAAA	-14	NA	64917247	64894545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_64895210_64895289_64895443_64896461_64896617_64896747_64896870_64897411_64897495_64897670_64897744_64897838_64897975_64898085_64898171_64898260_64898363_64898635_64898843_64900493_64900630_64900883_64901093_64901961_64902177_64902259_64902387_64902515_64902681_64903287_64903365_64903589_64903661_64905562_64905656_64905741_64905849_64906112_64906194_64906333_64906534_64906664_64906816_64907254_64907416_64907524_64907665_64907747_64907891_64908990_64909151_64909270_64909368_64909680_64909925_64910039_64910196_64910615_64910709_64910806_64910955_64911037_64911276_64911841_64911983_64912084_64912250_64912326_64912424_64913037_64913137_64913265_64913402_64913820_64913924_64914080_64914234_64914337_64914501_64916964
transcript_35473.known	chr11	+	2729	14	FSM	ENSG00000068971.14	ENST00000164133.7	2729	14	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	7.72148313312591	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGCTTGCTTTATTTAG	64923988	True	NA	12	True	AATAAA	-14	NA	64924688	64934475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_64925029_64925470_64925934_64926711_64926909_64927801_64927904_64928065_64928159_64928294_64928426_64930321_64930382_64930480_64930590_64931435_64931490_64931558_64931610_64931748_64931869_64932764_64932893_64933144_64933247_64933696
transcript_35475.nic	chr11	+	2835	14	NIC	ENSG00000068971.14	novel	2729	14	NA	NA	-483	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	14.821222589694	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGCTTGCTTTATTTAG	64924193	False	NA	12	True	AATAAA	-14	NA	64924205	64934475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_64925029_64925847_64925934_64926711_64926909_64927801_64927904_64928065_64928159_64928294_64928426_64930321_64930382_64930480_64930590_64931435_64931490_64931558_64931610_64931748_64931869_64932764_64932893_64933144_64933247_64933696
transcript_35479.nic	chr11	+	2821	13	NIC	ENSG00000068971.14	novel	2729	14	NA	NA	-23	0	intron_retention	TRUE	canonical	3	37	junction_4	7.96302217893572	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGCTTGCTTTATTTAG	64923965	True	NA	12	True	AATAAA	-14	NA	64924665	64934475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_64925029_64925470_64925934_64926711_64926909_64927801_64927904_64928065_64928159_64928294_64928426_64930321_64930382_64930480_64930590_64931435_64931610_64931748_64931869_64932764_64932893_64933144_64933247_64933696
transcript_35483.known	chr11	-	752	4	FSM	ENSG00000149735.7	ENST00000279168.7	752	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	1.69967317119759	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCTCTTTATTAAGTCT	-64935785	False	NA	1	True	AATAAA	-17	NA	64935893	64934470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64934875_64934990_64935176_64935357_64935461_64935833
transcript_35484.known	chr11	-	2066	3	FSM	ENSG00000168062.10	ENST00000301887.9	2066	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	1.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTTTGCCTAGTTACTT	-64996861	True	NA	-2	True	AATAAA	-17	NA	64996971	64987944	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_64989813_64994447_64994550_64996875
transcript_35490.known	chr11	+	1908	8	FSM	ENSG00000110025.13	ENST00000377244.8	1908	8	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_5	23.4076561694446	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGCTAATTCATTTAGTA	65026186	True	NA	16	True	AATAAA	-17	NA	65027438	65040572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65027637_65032167_65032204_65032430_65032552_65034846_65034963_65035058_65035207_65035519_65035664_65038571_65038830_65039685
transcript_35491.known	chr11	+	771	7	FSM	ENSG00000110025.13	ENST00000352068.5	771	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	70.4146449413914	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGAGTGGGCCATTCCCT	65026285	False	NA	NA	False	NA	NA	NA	65027537	65039792	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65027637_65032167_65032204_65032430_65032552_65034846_65034963_65035058_65035207_65035519_65035664_65039685
transcript_35493.known	chr11	+	830	6	FSM	ENSG00000213465.8	ENST00000529384.5	830	6	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_5	1342.06944678731	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGCTGAGTCATTTGT	64987839	True	NA	19	True	AATAAA	-17	NA	65014179	65022184	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65014273_65018363_65018475_65018570_65018734_65020418_65020500_65021720_65021889_65021970
transcript_35496.known	chr11	+	932	5	FSM	ENSG00000213465.8	ENST00000246747.9	932	5	0	0	0	0	multi-exon	FALSE	canonical	3	3233	junction_4	204.878470074335	1944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGCTGAGTCATTTGT	64987819	True	NA	19	True	AATAAA	-17	NA	65014159	65022184	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65014273_65018363_65018475_65018570_65018734_65020418_65020500_65021720
transcript_35501.known	chr11	+	795	4	FSM	ENSG00000213465.8	ENST00000533729.1	795	4	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_3	1673.59553058677	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATAAACCGCTCCTTGCC	64987851	True	NA	-5	True	NA	NA	NA	65014191	65022160	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65014273_65018363_65018475_65018570_65018734_65021720
transcript_35504.known	chr11	+	1228	3	FSM	ENSG00000213465.8	ENST00000524585.1	1228	3	0	0	0	0	multi-exon	FALSE	canonical	3	3669	junction_1	54	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTCCCCCATATACCCTT	64987830	True	NA	-79	True	AAAAAG	-32	NA	65014170	65019585	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65014273_65018363_65018475_65018570
transcript_35514.known	chr11	-	495	6	FSM	ENSG00000168060.16	ENST00000533842.5	495	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	5.00399840127872	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTAGTCACATTCCCGGG	-65047787	True	NA	NA	False	NA	NA	NA	65047861	65045429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65045458_65045821_65045915_65046026_65046115_65046188_65046363_65047646_65047739_65047841
transcript_35517.known	chr11	+	1362	3	FSM	ENSG00000168061.17	ENST00000531072.1	1362	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	73.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAATAAAAGGAACTTGTT	NA	False	NA	-13	True	NA	NA	NA	65040900	65044799	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65041107_65041285_65041867_65044224
transcript_35518.known	chr11	+	1366	3	FSM	ENSG00000168061.17	ENST00000674184.1	1366	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTCACTAGATGTGATTT	65040572	True	NA	16	True	AATAAA	-21	NA	65041244	65044828	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65041867_65043024_65043165_65044224
transcript_35519.known	chr11	+	1261	2	FSM	ENSG00000168061.17	ENST00000652489.1	1261	2	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	0	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTCACTAGATGTGATTT	65040537	True	NA	16	True	AATAAA	-21	NA	65041209	65044828	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65041867_65044224
transcript_35525.known	chr11	-	2475	6	FSM	ENSG00000146670.10	ENST00000275517.8	2475	6	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_1	61.0868234564542	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTGTGTTTCTTTTATT	-65074688	True	NA	-5	True	ATTAAA	-18	NA	65084040	65077452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65079188_65079352_65079788_65083363_65083400_65083484_65083551_65083628_65083724_65083932
transcript_35529.known	chr11	-	1012	5	FSM	ENSG00000146670.10	ENST00000404147.3	1012	5	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_4	52.0978646395416	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCCAGACTCTCCCTCCT	-65074695	True	NA	NA	False	NA	NA	NA	65084047	65079087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65079788_65083363_65083400_65083484_65083551_65083628_65083724_65083932
transcript_35533.nic	chr11	+	1644	11	Fusion	ENSG00000149823.9_ENSG00000149809.17	novel	1578	10	NA	NA	9	0	multi-exon	FALSE	canonical	3	26	junction_10	176.230984789849	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGAGATGCTCTTCCTCCT	65103983	True	NA	20	True	AATGAA	-15	NA	65111853	65116230	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr11_+_65112068_65112514_65112712_65112810_65112866_65113219_65113415_65113490_65113595_65114712_65114833_65114912_65115082_65115313_65115395_65115475_65115599_65115774_65115823_65115892
transcript_35536.known	chr11	+	2661	10	FSM	ENSG00000149823.9	ENST00000279281.8	2661	10	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_3	32.7847450222331	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTCCTTGTCTGCGTTCC	65088766	True	NA	27	True	NA	NA	NA	65096213	65111862	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65096479_65096997_65097128_65107580_65107728_65107802_65108023_65108196_65108915_65109279_65109496_65109704_65109924_65110481_65110604_65110693_65110782_65111326
transcript_35540.nic	chr11	+	1529	10	Fusion	ENSG00000149823.9_ENSG00000149809.17	novel	1578	10	NA	NA	-10	0	multi-exon	FALSE	canonical	3	77	junction_1	127.799418457302	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGAGATGCTCTTCCTCCT	65103964	True	NA	20	True	AATGAA	-15	NA	65111834	65116230	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr11_+_65111982_65112514_65112712_65112810_65112866_65113219_65113415_65113490_65113595_65114712_65114833_65114912_65115082_65115313_65115395_65115475_65115599_65115892
transcript_35544.known	chr11	+	1578	10	FSM	ENSG00000149809.17	ENST00000279263.14	1578	10	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_1	42.2859168687649	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGAGATGCTCTTCCTCCT	65104001	True	NA	20	True	AATGAA	-15	NA	65111871	65116230	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65112068_65112514_65112712_65112810_65112866_65113219_65113415_65113490_65113595_65114712_65114833_65114912_65115082_65115313_65115395_65115475_65115599_65115892
transcript_35564.nic	chr11	+	1950	9	Fusion	ENSG00000149823.9_ENSG00000149809.17	novel	1578	10	NA	NA	9	0	intron_retention	FALSE	canonical	3	389	junction_1	41.5383858617544	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGAGATGCTCTTCCTCCT	65103983	True	NA	20	True	AATGAA	-15	NA	65111853	65116230	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr11_+_65112068_65112514_65112712_65112810_65113415_65113490_65113595_65114712_65114833_65114912_65115082_65115313_65115395_65115475_65115599_65115892
transcript_35566.known	chr11	+	1671	9	FSM	ENSG00000149809.17	ENST00000529601.5	1671	9	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	157.867032657233	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACAAGCAACAGGGCTG	65104007	True	NA	NA	False	NA	NA	NA	65111877	65116384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65112068_65112514_65112712_65113219_65113415_65113490_65113595_65114712_65114833_65114912_65115082_65115313_65115395_65115475_65115599_65115892
transcript_35570.known	chr11	+	1382	8	FSM	ENSG00000162300.13	ENST00000294258.8	1382	8	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_3	22.1082679150602	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCGAGGCAGCCTTTTGC	65081995	True	NA	NA	False	AATAAA	-18	NA	65084221	65088398	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65084379_65084690_65084801_65085114_65085227_65086414_65086609_65086719_65086793_65086927_65087075_65087315_65087434_65087927
transcript_35575.known	chr11	+	1014	8	FSM	ENSG00000149809.17	ENST00000525385.5	1014	8	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	143.755177369054	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGGCTGGTGAGCTGGT	65104008	True	NA	NA	False	AAAACA	-27	NA	65111878	65115384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65111982_65112514_65112712_65112810_65112866_65113219_65113415_65113490_65113595_65114712_65114833_65114912_65115082_65115313
transcript_35591.known	chr11	+	2551	7	FSM	ENSG00000162300.13	ENST00000650243.1	2551	7	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_1	89.7063109386526	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTTTATTAAAACACCCGA	65081983	True	NA	NA	False	AATAAA	-5	NA	65084209	65088385	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65084361_65084690_65084801_65085114_65086609_65086719_65086793_65086927_65087075_65087315_65087434_65087927
transcript_356.known	chr1	+	3176	16	FSM	ENSG00000187583.11	ENST00000379410.8	3176	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	3.05213950460256	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCTGTCTGAAATTAACC	966230	True	NA	20	True	AGTAAA	-16	NA	966481	975865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_966615_966703_966804_970276_970424_970520_970602_970685_970759_970878_971007_971112_971209_971323_971405_972074_972151_972287_972425_972860_973011_973185_973327_973499_973641_973832_974052_974315_974365_974441
transcript_35603.known	chr11	+	384	2	FSM	ENSG00000162300.13	ENST00000526791.1	384	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACGAAAGGATGAGTCTC	65084234	True	NA	NA	False	AATAAA	-16	NA	65084289	65085003	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65084361_65084690
transcript_35605.known	chr11	-	1299	1	FSM	ENSG00000174276.7	ENST00000310597.6	1299	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTTGCTTGTTTCTGA	-65117682	False	81804	-8	True	AATAAA	-15	NA	65117701	65116402	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65116400_65117700
transcript_35608.known	chr11	-	3144	16	FSM	ENSG00000162298.19	ENST00000526060.5	3144	16	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_15	38.9623179780441	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATTGGTGGGGTTTGTGTC	-65134286	False	NA	-32	True	AATAAA	-13	NA	65134429	65127281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65128489_65128562_65128715_65129728_65129916_65130001_65130173_65130250_65130380_65130659_65130824_65130919_65131037_65131131_65131198_65131273_65131374_65131469_65131597_65132247_65132352_65132731_65132781_65132921_65133075_65133159_65133253_65133469_65133619_65134253
transcript_35609.known	chr11	-	3048	16	FSM	ENSG00000162298.19	ENST00000294256.12	3048	16	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	27.9248197049785	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGGGGTTTGTGTCACA	-65131019	True	NA	-29	True	AATAAA	-16	NA	65134532	65127278	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65128489_65128562_65128715_65129728_65129916_65130001_65130173_65130250_65130380_65130659_65130824_65130919_65131037_65131131_65131198_65131273_65131374_65131469_65131597_65132247_65132352_65132731_65132781_65132921_65133075_65133159_65133253_65133469_65133619_65134455
transcript_35612.known	chr11	-	3038	16	FSM	ENSG00000162298.19	ENST00000377190.8	3038	16	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	25.779061270729	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGGGGTTTGTGTCACA	-65131006	True	NA	-29	True	AATAAA	-16	NA	65134519	65127278	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65128489_65128562_65128715_65129728_65129916_65130001_65130176_65130250_65130380_65130659_65130824_65130919_65131037_65131131_65131198_65131273_65131374_65131469_65131597_65132247_65132352_65132731_65132781_65132921_65133075_65133159_65133253_65133469_65133619_65134455
transcript_35637.known	chr11	-	506	5	FSM	ENSG00000149806.11	ENST00000529639.6	506	5	0	0	0	0	multi-exon	FALSE	canonical	3	5602	junction_4	543.190114048479	2679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCATTGTTTCATCTTTAC	-65040330	True	NA	-4	True	AATAAA	-21	NA	65122134	65120629	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65120807_65120980_65121037_65121499_65121645_65121738_65121822_65122089
transcript_35639.known	chr11	+	2065	4	FSM	ENSG00000149792.9	ENST00000524482.5	2065	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	359.188901090591	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCTGAAACTGTCTCCAA	65122163	False	NA	19	True	ATTAAA	-29	NA	65122182	65127356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65122341_65124501_65124653_65125487_65125613_65125725
transcript_3564.known	chr1	-	2030	12	FSM	ENSG00000179051.14	ENST00000375433.3	2030	12	0	0	0	0	multi-exon	FALSE	canonical	3	1547	junction_11	118.708198384258	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAATGTCCCTTACAGG	-17438535	False	22335	NA	False	NA	NA	NA	17438561	17408675	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_17409195_17409973_17410052_17412121_17412195_17413072_17413179_17413536_17413718_17416479_17416647_17420713_17420829_17422202_17422292_17422704_17422837_17425540_17425685_17429105_17429200_17438229
transcript_35640.known	chr11	+	2026	4	FSM	ENSG00000149792.9	ENST00000279242.7	2026	4	0	0	0	0	multi-exon	FALSE	canonical	3	731	junction_2	38.8415584994561	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAACAACTCTTGTAACAC	65116862	True	NA	34	True	ATTAAA	-44	NA	65122320	65127371	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65122425_65124501_65124653_65125487_65125613_65125725
transcript_35646.known	chr11	-	461	4	FSM	ENSG00000149806.11	ENST00000279259.7	461	4	0	0	0	0	multi-exon	FALSE	canonical	2	92	junction_1	2877.03937330645	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTCATCGCATTGTTTC	-65040349	True	NA	-12	True	AATAAA	-13	NA	65122153	65120637	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65120807_65121499_65121645_65121738_65121822_65122089
transcript_35647.known	chr11	+	752	3	FSM	ENSG00000149792.9	ENST00000528529.1	752	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	409	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTATTTTTAGTAGAGA	65116832	True	NA	NA	False	NA	NA	NA	65122290	65126302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65122341_65125487_65125613_65125725
transcript_35648.known	chr11	+	518	3	FSM	ENSG00000149792.9	ENST00000534078.1	518	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	398.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTTGCTTGCATAAAGGA	65116852	True	NA	-28	True	NA	NA	NA	65122310	65126004	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65122425_65125487_65125613_65125725
transcript_35649.known	chr11	-	697	4	FSM	ENSG00000149806.11	ENST00000531743.5	697	4	0	0	0	0	multi-exon	FALSE	canonical	3	6652	junction_3	191.31184548329	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCATTGTTTCATCTTTAC	-65122038	False	NA	-4	True	AATAAA	-21	NA	65122057	65120629	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65120807_65120980_65121037_65121499_65121645_65121738
transcript_35650.known	chr11	-	538	5	FSM	ENSG00000149806.11	ENST00000527548.5	538	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2947.70287681781	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGCATTGTTTCATCTTTA	-65040309	True	NA	-5	True	AATAAA	-20	NA	65122113	65120630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65120807_65120980_65121037_65121499_65121645_65121738_65121822_65122035
transcript_3566.known	chr1	+	4625	29	FSM	ENSG00000074964.17	ENST00000361221.8	4625	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	65.7261247099489	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGATTGAGGTTTTGTTG	17538214	True	NA	12	True	AATAAA	-21	NA	17539697	17697869	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_17539951_17580552_17580633_17587459_17587646_17588445_17588480_17602126_17602219_17603507_17603592_17607801_17607978_17613057_17613175_17616093_17616203_17619338_17619446_17621863_17621942_17622995_17623176_17624386_17624504_17625955_17626049_17627329_17627504_17632320_17632467_17634547_17634563_17634834_17635017_17637887_17638004_17638561_17638690_17640201_17640303_17648553_17648676_17654635_17654723_17655878_17656103_17656553_17656709_17664446_17664596_17687572_17687748_17695157_17695281_17696847
transcript_35668.known	chr11	+	2952	22	FSM	ENSG00000014216.16	ENST00000279247.11	2952	22	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_1	99.291047019057	2255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTCTCCCCAGCCTAC	65174003	True	NA	21	True	AATAAA	-22	NA	65181927	65212006	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65182014_65182700_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585_65188747_65204682_65204859_65205709_65205722_65206462_65206675_65206779_65206820_65208054_65208121_65208204_65208263_65209322_65209388_65209848_65209918_65210017_65210097_65210335_65210453_65210813_65210873_65211259
transcript_35673.known	chr11	+	3083	22	FSM	ENSG00000014216.16	ENST00000533820.5	3083	22	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	166.65951005043	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTCTCCCCAGCCTAC	65181166	False	NA	21	True	AATAAA	-22	NA	65181193	65212006	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65181411_65182700_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585_65188747_65204682_65204859_65205709_65205722_65206462_65206675_65206779_65206820_65208054_65208121_65208204_65208263_65209322_65209388_65209848_65209918_65210017_65210097_65210335_65210453_65210813_65210873_65211259
transcript_35677.known	chr11	+	2960	22	FSM	ENSG00000014216.16	ENST00000524773.5	2960	22	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	172.337510969246	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTGTTTCTCCCCAG	65181683	False	NA	16	True	AATAAA	-17	NA	65181744	65212001	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65181844_65182700_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585_65188747_65204682_65204859_65205709_65205722_65206462_65206675_65206779_65206820_65208054_65208121_65208204_65208263_65209322_65209388_65209848_65209918_65210017_65210097_65210335_65210453_65210813_65210873_65211259
transcript_35682.nic	chr11	+	2981	22	NIC	ENSG00000014216.16	novel	3086	21	NA	NA	-13	0	combination_of_known_junctions	TRUE	canonical	3	56	junction_1	168.279785380777	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTGTTTCTCCCCAG	65182359	False	NA	16	True	AATAAA	-17	NA	65182421	65212001	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_65182542_65182700_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585_65188747_65204682_65204859_65205709_65205722_65206462_65206675_65206779_65206820_65208054_65208121_65208204_65208263_65209322_65209388_65209848_65209918_65210017_65210097_65210335_65210453_65210813_65210873_65211259
transcript_35684.nic	chr11	+	3002	22	NIC	ENSG00000014216.16	novel	3086	21	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	176.811954121268	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTGTTTCTCCCCAG	65182359	False	NA	16	True	AATAAA	-17	NA	65182421	65212001	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_65182563_65182700_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585_65188747_65204682_65204859_65205709_65205722_65206462_65206675_65206779_65206820_65208054_65208121_65208204_65208263_65209322_65209388_65209848_65209918_65210017_65210097_65210335_65210453_65210813_65210873_65211259
transcript_3569.nic	chr1	+	4404	28	NIC	ENSG00000074964.17	novel	4625	29	NA	NA	103	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	52.6153054763571	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGATTGAGGTTTTGTT	17538317	False	NA	11	True	AATAAA	-20	NA	17539800	17697868	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_17539951_17580552_17580633_17587459_17587646_17588445_17588480_17602126_17602219_17603507_17603592_17607801_17607978_17616093_17616203_17619338_17619446_17621863_17621942_17622995_17623176_17624386_17624504_17625955_17626049_17627329_17627504_17632320_17632467_17634547_17634563_17634834_17635017_17637887_17638004_17638561_17638690_17640201_17640303_17648553_17648676_17654635_17654723_17655878_17656103_17656553_17656709_17664446_17664596_17687572_17687748_17695157_17695281_17696847
transcript_35750.known	chr11	-	1662	2	FSM	ENSG00000254614.2	ENST00000526623.2	1662	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTTTTGTTTCTCAAAATG	-65181753	True	NA	-24	True	AATAAA	-22	NA	65181834	65180020	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65181073_65181224
transcript_35752.known	chr11	+	3086	21	FSM	ENSG00000014216.16	ENST00000527323.5	3086	21	0	0	0	0	multi-exon	FALSE	canonical	3	726	junction_1	53.0319714889047	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCACATCTGTCTGTGAT	65180070	True	NA	2	True	AATAAA	-3	NA	65182461	65211987	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585_65188747_65204682_65204859_65205709_65205722_65206462_65206675_65206779_65206820_65208054_65208121_65208204_65208263_65209322_65209388_65209848_65209918_65210017_65210097_65210335_65210453_65210813_65210873_65211259
transcript_35756.known	chr11	+	3544	18	FSM	ENSG00000014138.9	ENST00000265465.8	3544	18	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_4	11.4894264615439	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCAGCTGTTTTATTTCA	65260247	True	NA	11	True	AGTAAA	-21	NA	65261961	65298685	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65262372_65266581_65266707_65267476_65267569_65268671_65268730_65275891_65275999_65278729_65278924_65279537_65279627_65280991_65281148_65281669_65281733_65282478_65282522_65287715_65287841_65289049_65289089_65289798_65289873_65294152_65294262_65294545_65294653_65295539_65295600_65295863_65295991_65297119
transcript_35757.nnic	chr11	+	3087	18	NNC	ENSG00000014138.9	novel	3544	18	NA	NA	-58	-5	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_17	37.5171471753908	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAGGAGCAGCTGTTTTA	65260147	True	NA	6	True	AGTAAA	-16	NA	65261861	65298680	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_65262372_65266581_65266707_65267476_65267569_65268671_65268730_65275891_65275999_65278729_65278924_65279537_65279627_65280991_65281148_65281669_65281733_65282478_65282522_65287715_65287841_65289049_65289089_65289798_65289873_65294152_65294262_65294545_65294653_65295539_65295600_65295863_65295991_65297671
transcript_35761.nnic	chr11	+	3681	18	Fusion	ENSG00000149798.5_ENSG00000014138.9	novel	3544	18	NA	NA	-112	-325	multi-exon	FALSE	canonical	2	11	junction_17	35.946423030946	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGAGCTCCCTGTCCCTTT	NA	False	NA	9	True	AATAAA	-18	NA	65261807	65322092	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr11_+_65262372_65266581_65266707_65267476_65267569_65268671_65268730_65275891_65275999_65278729_65278924_65279537_65279627_65280991_65281148_65281669_65281733_65282478_65282522_65287715_65287841_65289049_65289089_65289798_65289873_65294152_65294262_65294545_65294653_65295539_65295600_65295863_65295991_65320543
transcript_3577.known	chr1	+	1841	3	FSM	ENSG00000117148.8	ENST00000375406.2	1841	3	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	2	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCTCCTGTGATGGAT	17755194	True	NA	19	True	AATAAA	-19	NA	17755332	17827063	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_17755505_17822984_17823357_17825766
transcript_35782.known	chr11	+	1963	2	FSM	ENSG00000149798.5	ENST00000279249.3	1963	2	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	0	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGCAAGGGACCAACAGC	65312734	True	NA	6	True	AATAAA	-15	NA	65314865	65322417	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65314955_65320543
transcript_35787.known	chr11	+	2462	12	FSM	ENSG00000133884.10	ENST00000252268.8	2462	12	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	283.331946196572	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCTGGATGGTTTATCT	65324171	True	NA	18	True	AATAAA	-18	NA	65333866	65352983	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65333919_65340384_65340546_65340965_65341074_65341398_65341563_65343744_65343838_65343990_65344070_65344579_65344622_65345665_65345804_65345929_65346059_65346246_65346360_65348849_65348932_65351682
transcript_35795.known	chr11	+	3714	11	FSM	ENSG00000133884.10	ENST00000528416.6	3714	11	0	0	0	0	multi-exon	FALSE	canonical	3	603	junction_4	66.0950830243824	2250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGGCCCAAGCATGCAG	65324156	True	NA	4	True	AATAAA	-18	NA	65333851	65354262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65333919_65340384_65340546_65340965_65341074_65341398_65341563_65343744_65343838_65343990_65344070_65345665_65345804_65345929_65346059_65346246_65346360_65348849_65348932_65351682
transcript_358.known	chr1	+	2455	15	FSM	ENSG00000187583.11	ENST00000379409.6	2455	15	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	2.99659670905758	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGCCCCGAGGAGGAGGG	966250	True	NA	NA	False	NA	NA	NA	966501	975008	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_966615_966703_966804_970276_970424_970520_970602_970685_971007_971076_971209_971323_971405_972074_972151_972287_972425_972860_973011_973185_973327_973499_973641_973832_974052_974315_974365_974441
transcript_35818.known	chr11	+	2085	6	FSM	ENSG00000133884.10	ENST00000415073.6	2085	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	310.27213861383	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTTTGTTATAAAGAACAA	65324159	True	NA	NA	False	TATAAA	-44	NA	65333854	65353188	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65333919_65340384_65340546_65340965_65341074_65341398_65341563_65348849_65348932_65351682
transcript_35819.known	chr11	+	940	4	FSM	ENSG00000133884.10	ENST00000444314.6	940	4	0	0	0	0	multi-exon	FALSE	canonical	3	726	junction_1	42.9055810925442	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTACTAGGGAAGCTGAG	65324156	True	NA	NA	False	ATTAAA	-39	NA	65333851	65342002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65333919_65340384_65340546_65340965_65341074_65341398
transcript_35820.known	chr11	+	2028	2	FSM	ENSG00000173825.7	ENST00000309880.6	2028	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCAGGGTGTTATTTTC	65354665	True	NA	10	True	AATAAA	-17	NA	65354750	65357613	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65354958_65355792
transcript_35821.known	chr11	-	2261	7	FSM	ENSG00000162241.13	ENST00000398802.6	2261	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.89296944860009	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACTGCACTCCTGACCTGT	NA	False	NA	-7	True	AATAAA	-17	NA	65382646	65375191	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65376676_65376817_65377077_65379375_65379562_65379866_65379939_65380131_65380176_65381914_65381970_65382485
transcript_35826.known	chr11	+	3685	11	FSM	ENSG00000126391.14	ENST00000317568.10	3685	11	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	12.6111062163476	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGGGCAGCTCATGATA	65384569	True	NA	NA	False	ATTAAA	-17	NA	65386636	65413525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65386762_65387036_65387122_65389360_65389529_65393572_65393675_65394040_65394100_65394258_65394426_65396798_65397021_65399735_65399860_65400723_65400868_65404863_65405069_65411241
transcript_35831.known	chr11	+	1818	10	FSM	ENSG00000126391.14	ENST00000416776.6	1818	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	24.285340800116	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTCTTCCCTGGACTTG	65384589	True	NA	NA	False	NA	NA	NA	65386656	65411780	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65386762_65387036_65387122_65389360_65389529_65394040_65394100_65394258_65394426_65396798_65397021_65399735_65399860_65400723_65400868_65404863_65405069_65411241
transcript_35832.known	chr11	+	3514	10	FSM	ENSG00000126391.14	ENST00000355991.9	3514	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	25.963412052966	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCTGGGGCAGCTCATG	65384569	True	NA	NA	False	ATTAAA	-14	NA	65386636	65413522	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65386762_65387036_65387122_65393572_65393675_65394040_65394100_65394258_65394426_65396798_65397021_65399735_65399860_65400723_65400868_65404863_65405069_65411241
transcript_35835.nnic	chr11	+	3465	9	NIC	ENSG00000126391.14	novel	3685	11	NA	NA	-34	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	28.1780056072107	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGGGCAGCTCATGATA	65384519	True	NA	NA	False	ATTAAA	-17	NA	65386586	65413525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_65386762_65387036_65387122_65394040_65394100_65394258_65394426_65396798_65397021_65399735_65399860_65400723_65400868_65404863_65405069_65411241
transcript_35839.known	chr11	+	394	2	FSM	ENSG00000251562.9	ENST00000617791.1	394	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAGACAAGCTAGGAA	65226538	True	NA	33	True	GATAAA	-28	NA	65499041	65499785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65499339_65499688
transcript_35842.known	chr11	-	4833	28	FSM	ENSG00000168056.18	ENST00000301873.11	4833	28	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_26	42.0387827994491	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCGGGCTCCCAGCTTC	-65558279	False	80	-2	True	NA	NA	NA	65558359	65538558	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65539232_65539327_65539460_65539547_65539629_65539719_65539882_65540012_65540154_65540244_65540383_65540485_65540615_65540870_65540955_65541125_65541294_65541599_65541729_65543104_65543225_65543426_65543550_65546441_65546565_65546797_65546921_65547438_65547568_65547689_65547822_65547919_65548046_65551125_65551225_65551401_65551475_65551547_65551565_65551971_65552158_65552247_65552407_65552859_65552983_65553163_65553257_65553424_65553531_65553700_65553904_65554050_65554381_65557628
transcript_35851.known	chr11	+	2636	18	FSM	ENSG00000142186.18	ENST00000270176.10	2636	18	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_13	57.3256948856065	1294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTGCCGGGCTCAGT	65522193	True	NA	14	True	AATAAA	-13	NA	65525082	65538704	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65525265_65525573_65525715_65525920_65526044_65526123_65526351_65526782_65526874_65526961_65527118_65530628_65530788_65531575_65531684_65532691_65532806_65535226_65535383_65535952_65536142_65536258_65536335_65536585_65536751_65536985_65537129_65537808_65537881_65537966_65538183_65538269_65538325_65538441
transcript_35852.known	chr11	+	2570	18	FSM	ENSG00000142186.18	ENST00000533862.5	2570	18	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_15	113.092912777129	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTGCCGGGCTCAGT	65522222	True	NA	14	True	AATAAA	-13	NA	65525111	65538704	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65525265_65525573_65525715_65525920_65526044_65526123_65526351_65526782_65526874_65526961_65527118_65530628_65530788_65531575_65531684_65532691_65532806_65535226_65535383_65535952_65536142_65536258_65536335_65536585_65536751_65536985_65537129_65537808_65537881_65538003_65538183_65538269_65538325_65538441
transcript_35854.known	chr11	+	2583	18	FSM	ENSG00000142186.18	ENST00000420247.6	2583	18	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_13	77.4220447313336	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTGCCGGGCTCAGT	65522195	True	NA	14	True	AATAAA	-13	NA	65525084	65538704	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65525265_65525573_65525715_65525920_65526044_65526123_65526351_65526782_65526874_65526961_65527118_65530628_65530788_65531575_65531684_65532691_65532806_65535226_65535383_65535952_65536142_65536258_65536335_65536585_65536751_65537036_65537129_65537808_65537881_65537966_65538183_65538269_65538325_65538441
transcript_35865.nnic	chr11	+	2667	18	NNC	ENSG00000142186.18	novel	2636	18	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	108.946226537759	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTGCCGGGCTCAGT	65522182	True	NA	14	True	AATAAA	-13	NA	65525071	65538704	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_65525265_65525553_65525715_65525920_65526044_65526123_65526351_65526782_65526874_65526961_65527118_65530628_65530788_65531575_65531684_65532691_65532806_65535226_65535383_65535952_65536142_65536258_65536335_65536585_65536751_65536985_65537129_65537808_65537881_65537966_65538183_65538269_65538325_65538441
transcript_35873.known	chr11	+	2715	17	FSM	ENSG00000142186.18	ENST00000524944.5	2715	17	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_13	56.7417394869068	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTGCCGGGCTCAGT	65522231	True	NA	14	True	AATAAA	-13	NA	65525120	65538704	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65525265_65525573_65525715_65525920_65526044_65526123_65526351_65526782_65526874_65526961_65527118_65530628_65530788_65531575_65531684_65532691_65532806_65535226_65535383_65535952_65536142_65536258_65536335_65536585_65536751_65536985_65537129_65537808_65537881_65537966_65538183_65538269
transcript_35874.known	chr11	+	2584	17	FSM	ENSG00000142186.18	ENST00000525364.5	2584	17	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_16	136.81579769895	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTGCCGGGCTCAGT	65522187	True	NA	14	True	AATAAA	-13	NA	65525076	65538704	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65525265_65525573_65525715_65525920_65526044_65526123_65526351_65526782_65526874_65526961_65527118_65530628_65530788_65531575_65531684_65532691_65532806_65535226_65535383_65535952_65536142_65536258_65536335_65536585_65536751_65536985_65537129_65537811_65537881_65537966_65538183_65538441
transcript_3592.known	chr1	+	1892	10	FSM	ENSG00000117154.12	ENST00000251296.4	1892	10	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_5	34.1731249542064	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGGTTTGTGGCTCTGCA	18104585	True	NA	16	True	ATTAAA	-23	NA	18107797	18378483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_18108199_18227897_18228011_18291865_18291988_18334891_18335011_18362114_18362231_18365222_18365698_18376309_18376396_18376799_18376993_18377392_18377432_18378255
transcript_3593.nnic	chr1	+	1739	10	NNC	ENSG00000117154.12	novel	1892	10	NA	NA	-84	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	68.2529789518558	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGGTTTGTGGCTCTGCA	18107693	False	NA	16	True	ATTAAA	-23	NA	18107713	18378483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_18108199_18227897_18228011_18291865_18291988_18334891_18335011_18362114_18362231_18365459_18365698_18376309_18376396_18376799_18376993_18377392_18377432_18378255
transcript_35954.known	chr11	-	748	6	FSM	ENSG00000168056.18	ENST00000532661.6	863	6	0	115	0	-115	multi-exon	FALSE	canonical	3	45	junction_5	50.2537560785261	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGCAAGAGCGAGCGCT	-65540460	True	NA	NA	False	NA	NA	NA	65540683	65539194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65539232_65539327_65539460_65539547_65539629_65539719_65539882_65540244_65540383_65540485
transcript_3596.nnic	chr1	+	1385	8	NIC	ENSG00000117154.12	novel	1892	10	NA	NA	-84	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_4	77.0337853258728	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGGTTTGTGGCTCTGCA	18107693	False	NA	16	True	ATTAAA	-23	NA	18107713	18378483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_18108199_18227897_18228011_18291865_18291988_18334891_18335011_18376309_18376396_18376799_18376993_18377392_18377432_18378255
transcript_35968.known	chr11	+	2586	17	FSM	ENSG00000142186.18	ENST00000527009.5	2586	17	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_12	58.9634089393583	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAGAGCCACAATAAATTC	65522523	False	NA	-15	True	NA	NA	NA	65525412	65538675	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65525715_65525920_65526044_65526123_65526351_65526782_65526874_65526961_65527118_65530628_65530788_65531575_65531684_65532691_65532806_65535226_65535383_65535952_65536142_65536258_65536335_65536585_65536751_65536985_65537129_65537808_65537881_65537966_65538183_65538269_65538325_65538441
transcript_35970.known	chr11	+	769	4	FSM	ENSG00000173465.8	ENST00000309328.8	769	4	0	0	0	0	multi-exon	FALSE	canonical	3	756	junction_1	129.68251831128	529	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGATGAGTTGAGCTTGT	65559266	True	NA	NA	False	NA	NA	NA	65570476	65571888	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65570511_65570603_65570756_65570885_65570971_65571390
transcript_35973.known	chr11	+	1409	2	FSM	ENSG00000176973.8	ENST00000316409.2	1409	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGGCTGGCTCTGGGG	65572309	False	NA	20	True	AATAAA	-22	NA	65572348	65574198	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65572961_65573401
transcript_35974.known	chr11	+	1251	2	FSM	ENSG00000176973.8	ENST00000530349.2	1251	2	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGCTCTGCCTGGCTGG	65572003	True	NA	12	True	AATAAA	-14	NA	65572537	65574190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65572961_65573362
transcript_35989.known	chr11	-	3543	10	FSM	ENSG00000173327.8	ENST00000309100.8	3543	10	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_7	16.7029235261671	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTAGCCTGTCACCTTTC	-65612819	True	NA	-3	True	AATAAA	-20	NA	65614221	65597756	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65598629_65599393_65599769_65605760_65605853_65605945_65606082_65606690_65606805_65607269_65607514_65607640_65607817_65607921_65608071_65608267_65608449_65613017
transcript_35997.known	chr11	-	5605	1	FSM	ENSG00000173327.8	ENST00000527304.1	5605	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGGAAAAGA	-65612834	True	NA	NA	False	NA	NA	NA	65614236	65608631	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65608600_65614200
transcript_35999.known	chr11	+	3499	16	FSM	ENSG00000213445.10	ENST00000534313.6	3499	16	0	0	0	0	multi-exon	TRUE	canonical	3	70	junction_1	59.894574044733	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGTCTGTGTCTGAACA	65636677	True	NA	10	True	AGTAAA	-8	NA	65638100	65650912	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65638183_65640830_65641601_65642249_65642378_65642462_65642640_65644954_65645130_65645853_65645958_65646220_65646379_65646455_65647066_65647383_65647659_65649261_65649481_65649560_65649673_65649756_65649866_65649949_65650052_65650137_65650193_65650400_65650480_65650568
transcript_36.known	ERCC-00092	+	1108	1	FSM	ERCC-00092A	DQ459425	1108	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	230	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00092_+_0_1100
transcript_360.known	chr1	-	885	4	FSM	ENSG00000188290.11	ENST00000304952.11	885	4	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_3	7.31816613336672	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTGCGTCACGAGTTTT	-999554	True	NA	-1	True	NA	NA	NA	1000097	998963	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_999433_999525_999614_999691_999788_999865
transcript_36002.nnic	chr11	+	1413	9	NNC	ENSG00000213445.10	novel	799	6	NA	NA	-257	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	75.7016140845095	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGTCTGTGTCTGAACA	65647081	False	NA	10	True	AGTAAA	-8	NA	65647108	65650912	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_65647227_65647383_65647659_65649261_65649481_65649560_65649673_65649756_65649866_65649949_65650052_65650137_65650193_65650400_65650480_65650568
transcript_36006.known	chr11	-	2681	11	FSM	ENSG00000173039.20	ENST00000308639.13	2681	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	29.1288516766453	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAGAGATCCGCTTTTTTT	-65663074	False	NA	-24	True	AATAAA	-16	NA	65663090	65653601	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65655001_65655687_65655763_65655854_65655936_65658286_65658500_65658717_65658823_65659665_65659789_65660123_65660216_65661686_65661836_65661936_65662089_65662178_65662206_65662825
transcript_36009.known	chr11	-	3183	10	FSM	ENSG00000173039.20	ENST00000525693.5	3183	10	0	0	0	0	multi-exon	TRUE	canonical	3	85	junction_3	7.55392139190379	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGAGATCCGCTTTTTTTC	-65660584	True	NA	-23	True	AATAAA	-17	NA	65662895	65653600	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65655763_65655854_65655936_65658286_65658500_65658717_65658823_65659665_65659798_65660123_65660216_65661686_65661836_65661936_65662089_65662178_65662206_65662825
transcript_36018.known	chr11	+	1697	4	FSM	ENSG00000285533.3	ENST00000654110.1	1697	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	9.89949493661167	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATGGGGTTTCCATATT	65662751	True	NA	NA	False	NA	NA	NA	65663005	65667304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65663149_65663426_65663684_65665420_65665544_65666130
transcript_36020.known	chr11	+	2628	4	FSM	ENSG00000285533.3	ENST00000654031.1	2628	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	8.73053390247253	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTATATCTGTATCTGTT	65662752	True	NA	-2	True	AATAAA	-5	NA	65663006	65671704	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65663149_65663426_65665544_65666130_65666218_65671422
transcript_36030.known	chr11	+	2237	14	FSM	ENSG00000172977.13	ENST00000377046.7	2237	14	0	0	0	0	multi-exon	TRUE	canonical	3	88	junction_5	98.7564693409317	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCATGCAAAGTTCTTGG	65711985	False	NA	23	True	AATAAA	-17	NA	65711995	65719604	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65712280_65712378_65712446_65712765_65712835_65712921_65713059_65713347_65713504_65713592_65713668_65713773_65713849_65714494_65714744_65714820_65714911_65716666_65716808_65716888_65716983_65718589_65718750_65718872_65718955_65719046
transcript_36043.known	chr11	+	2059	13	FSM	ENSG00000172977.13	ENST00000352980.8	2059	13	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	58.0896696687305	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCATGCAAAGTTCTTGG	65711879	True	NA	23	True	AATAAA	-17	NA	65712017	65719604	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65712280_65712378_65712446_65712765_65712835_65712921_65713059_65713592_65713668_65713773_65713849_65714494_65714744_65714820_65714911_65716666_65716808_65716888_65716983_65718589_65718750_65718872_65718955_65719046
transcript_36051.known	chr11	+	2080	13	FSM	ENSG00000172977.13	ENST00000341318.9	2080	13	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_4	97.2358244452915	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCATGCAAAGTTCTTGG	65708642	True	NA	23	True	AATAAA	-17	NA	65712251	65719604	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65712446_65712765_65712835_65712921_65713059_65713347_65713504_65713592_65713668_65713773_65713849_65714494_65714744_65714820_65714911_65716666_65716808_65716888_65716983_65718589_65718750_65718872_65718955_65719046
transcript_36058.known	chr11	+	1697	12	FSM	ENSG00000172977.13	ENST00000530446.5	1697	12	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_3	42.1486938907271	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAACTCCAAGGTCAGCTG	65708629	True	NA	NA	False	NA	NA	NA	65712238	65719364	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65712446_65712765_65712835_65712921_65713059_65713592_65713668_65713773_65713849_65714494_65714744_65714820_65714911_65716666_65716808_65716888_65716983_65718589_65718750_65718872_65718955_65719046
transcript_36070.known	chr11	+	745	7	FSM	ENSG00000172977.13	ENST00000527544.5	745	7	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_3	54.3834125037732	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGTGAATCAAATGACAGC	65708814	False	NA	NA	False	NA	NA	NA	65712423	65714938	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65712446_65712765_65712835_65712921_65713059_65713592_65713668_65713773_65713849_65714494_65714744_65714820
transcript_36076.known	chr11	-	2085	5	FSM	ENSG00000172922.11	ENST00000531596.6	2085	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	166.071332565256	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATTTAACCAATAAAATTT	-65714317	True	NA	-48	True	NA	NA	NA	65720798	65717708	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65719157_65719680_65719810_65720044_65720165_65720241_65720418_65720586
transcript_36078.known	chr11	-	2645	4	FSM	ENSG00000172922.11	ENST00000308418.10	2645	4	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_3	60.9061208381847	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGATCAGGTAAAGCCTC	-65714317	True	NA	-12	True	AATAAA	-21	NA	65720798	65717672	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65719810_65720044_65720165_65720241_65720418_65720586
transcript_36082.known	chr11	-	6980	2	FSM	ENSG00000254470.3	ENST00000532090.3	6980	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGTTTTTTGTTTTTGGT	-65780367	True	NA	-3	True	AATAAA	-17	NA	65780976	65773897	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65780343_65780441
transcript_36085.nnic	chr11	+	2803	5	NNC	ENSG00000172818.10	novel	2988	4	NA	NA	-49	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	11.9268604418766	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGTTTTCTGTGTTTCCG	65786465	True	NA	19	True	ATTAAA	-11	NA	65787013	65797211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_65787474_65794030_65794249_65794537_65794728_65795045_65796638_65796868
transcript_36086.known	chr11	+	2988	4	FSM	ENSG00000172818.10	ENST00000335987.8	2988	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	1.69967317119759	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTGTGTTTCCGATG	65786514	True	NA	22	True	ATTAAA	-14	NA	65787062	65797214	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65787474_65794030_65794249_65794537_65794728_65795045
transcript_36095.known	chr11	+	2364	16	FSM	ENSG00000172732.12	ENST00000308110.9	2364	16	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_9	20.7520815555666	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAACAGTCCAGTTGCCTCG	65859370	True	NA	28	True	AATAAA	-39	NA	65860432	65866439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65860889_65860972_65861103_65861349_65861436_65861946_65862046_65862210_65862280_65862443_65862530_65863064_65863206_65863409_65863503_65863599_65863722_65863803_65863902_65864496_65864614_65864719_65864816_65865016_65865146_65865219_65865324_65865810_65865895_65865985
transcript_36097.known	chr11	+	1817	16	FSM	ENSG00000172732.12	ENST00000524647.5	1817	16	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_12	43.8023845114497	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAGAAAAGATTGAAAAC	65860811	False	NA	6	True	AATAAA	-26	NA	65860859	65866417	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65860889_65860972_65861103_65861349_65861436_65861946_65862046_65862210_65862280_65862443_65862530_65863064_65863206_65863409_65863503_65863599_65863722_65863803_65863902_65864496_65864614_65864719_65864816_65865114_65865146_65865219_65865324_65865810_65865895_65865985
transcript_361.known	chr1	-	1040	3	FSM	ENSG00000188290.11	ENST00000428771.6	1040	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	7.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCGTCACGAGTTTTCT	-999629	True	NA	1	True	NA	NA	NA	1000172	998961	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_999433_999525_999614_999691
transcript_36124.known	chr11	+	1681	13	FSM	ENSG00000172803.18	ENST00000308342.7	1681	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	3.94669341207154	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCCTGTTGTCCTTACT	65833828	True	NA	8	True	AATAAA	-20	NA	65833962	65853701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65834102_65849477_65849583_65849919_65850031_65850149_65850272_65850430_65850555_65850750_65850856_65851054_65851161_65851327_65851404_65851639_65851680_65852464_65852552_65852629_65852790_65852872_65852959_65853281
transcript_3613.known	chr1	+	6473	1	FSM	ENSG00000280222.1	ENST00000624418.1	6473	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAGAAAGAAAG	18109378	False	NA	NA	False	AAGAAA	-14	NA	18109388	18115861	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_18109400_18115900
transcript_3614.known	chr1	+	5045	1	FSM	ENSG00000179023.9	ENST00000400664.3	5045	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TACACACACCAAAAAAAAAA	18480909	False	NA	NA	False	AATAAA	-11	NA	18480929	18485974	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_18480900_18486000
transcript_36144.known	chr11	-	1813	12	FSM	ENSG00000172638.13	ENST00000531972.5	1813	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	18.4094837219595	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTTTCAATCTTTTCTT	-65872302	True	NA	0	True	TATAAA	-21	NA	65872811	65866440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65866713_65866844_65867080_65867860_65868057_65868294_65868422_65868509_65868630_65869856_65869977_65870120_65870238_65870535_65870659_65871156_65871364_65871969_65872019_65872243_65872362_65872682
transcript_36153.known	chr11	-	1934	11	FSM	ENSG00000172638.13	ENST00000307998.11	1934	11	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	5.27636238330917	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTTTCAATCTTTTCTT	-65872291	True	NA	0	True	TATAAA	-21	NA	65872800	65866440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65867080_65867860_65868057_65868294_65868422_65868509_65868630_65869856_65869977_65870120_65870238_65870535_65870659_65871156_65871364_65871969_65872019_65872243_65872362_65872682
transcript_3616.known	chr1	-	2124	16	FSM	ENSG00000159423.17	ENST00000290597.9	2124	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	45.1750176781617	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGTGGTGGATGGTCTT	-18899442	True	NA	-5	True	AATAAA	-16	NA	18902553	18871429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_18871791_18872803_18872958_18874462_18874582_18875381_18875504_18876314_18876468_18877207_18877256_18877415_18877613_18879299_18879374_18881699_18881888_18883123_18883199_18883278_18883429_18885472_18885629_18886463_18886512_18889361_18889455_18890011_18890106_18902461
transcript_36177.known	chr11	-	1878	5	FSM	ENSG00000172757.13	ENST00000525451.6	1878	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	4568.0287323965	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACTGGCTGAGACGCCT	-65859379	False	NA	-37	True	NA	NA	NA	65859415	65854674	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65855449_65855653_65855731_65855934_65856243_65858096_65858631_65859230
transcript_36180.known	chr11	-	860	4	FSM	ENSG00000172757.13	ENST00000524553.5	860	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4972.17942377608	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTTTTTTTAACAACAT	-65856928	False	208980	-144	True	NA	NA	NA	65856964	65855053	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65855449_65855653_65855731_65855934_65856243_65856884
transcript_36181.known	chr11	-	962	4	FSM	ENSG00000172757.13	ENST00000527344.5	962	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	4962.75140980843	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTGCTTGTCTGTTTA	-65856997	False	208980	-65	True	NA	NA	NA	65857033	65854974	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65855449_65855653_65855731_65855934_65856243_65856930
transcript_36182.known	chr11	-	1062	4	FSM	ENSG00000172757.13	ENST00000531407.5	1062	4	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_3	4898.16952204256	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCCATGCTGCCAACTTC	-65857832	False	NA	-99	True	NA	NA	NA	65857868	65855008	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65855449_65855653_65855731_65855934_65856243_65857631
transcript_36183.known	chr11	-	1245	4	FSM	ENSG00000172757.13	ENST00000308162.10	1245	4	0	0	0	0	multi-exon	FALSE	canonical	3	10523	junction_1	20.1714870272097	5273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGCTGAGACGCCTTT	-65649200	True	NA	-35	True	NA	NA	NA	65858180	65854672	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65855449_65855653_65855731_65855934_65856243_65858096
transcript_36187.known	chr11	-	758	4	FSM	ENSG00000172757.13	ENST00000534769.5	758	4	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_3	4905.24053096957	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGATCCCAGCAGGGGGAG	NA	False	NA	NA	False	GGGGCT	-3	NA	65861421	65855240	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65855449_65855653_65855731_65855934_65856243_65861256
transcript_36196.known	chr11	-	1509	2	FSM	ENSG00000172757.13	ENST00000530945.1	1509	2	0	0	0	0	multi-exon	FALSE	canonical	3	10553	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGACAATAATAAAA	-65649214	True	NA	-46	True	ATTAAA	-3	NA	65858194	65854831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65856243_65858096
transcript_36197.known	chr11	-	1261	10	FSM	ENSG00000172500.13	ENST00000338369.6	1261	10	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_5	244.310367269904	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGTCCTCGCTCCGGGG	NA	False	NA	-23	True	AATAAA	-18	NA	65888531	65883920	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65884044_65884391_65884490_65884569_65884657_65884934_65884999_65885077_65885187_65885508_65885664_65886321_65886423_65887599_65887727_65887933_65888133_65888333
transcript_36198.known	chr11	-	1361	10	FSM	ENSG00000172500.13	ENST00000357519.9	1361	10	0	0	0	0	multi-exon	FALSE	canonical	3	805	junction_5	51.492777870683	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTCTTGTCTTGGTTTAT	-65880668	True	NA	-1	True	NA	NA	NA	65888471	65883739	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65884044_65884391_65884490_65884569_65884657_65884934_65884999_65885077_65885187_65885529_65885664_65886321_65886423_65887599_65887727_65887933_65888133_65888333
transcript_362.known	chr1	-	1038	2	FSM	ENSG00000188290.11	ENST00000481869.1	1038	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTCTGCGTCACGAGTT	-999553	True	NA	-3	True	NA	NA	NA	1000096	998965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_999433_999525
transcript_3620.nnic	chr1	-	3441	16	NNC	ENSG00000159423.17	novel	3139	15	NA	NA	-58	0	intron_retention	FALSE	canonical	2	4	junction_7	59.3205978841526	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGTGGTGGATGGTCTT	-18902701	True	NA	-5	True	AATAAA	-16	NA	18902782	18871429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_18872958_18874462_18874582_18875381_18875504_18876314_18876468_18877207_18877256_18877415_18877613_18879299_18879374_18881418_18881494_18881699_18881888_18883123_18883199_18883278_18883429_18885472_18885629_18886463_18886512_18889361_18889455_18890011_18890106_18902461
transcript_36205.known	chr11	-	1010	9	FSM	ENSG00000172500.13	ENST00000533037.5	1010	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_6	298.690789111415	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGCGGCTGCCTCCTGCGC	-65880687	True	NA	-111	True	NA	NA	NA	65888490	65884008	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65884044_65884391_65884490_65884569_65884657_65884934_65884999_65885077_65885187_65885529_65885664_65887599_65887727_65887933_65888133_65888333
transcript_36221.known	chr11	+	963	1	FSM	ENSG00000175602.4	ENST00000312579.4	963	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	956	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCACGGCCTGGGCAGCGT	65884592	True	NA	8	True	AATAAA	-17	NA	65890672	65891635	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65890700_65891600
transcript_36222.known	chr11	-	1132	4	FSM	ENSG00000175592.9	ENST00000532401.1	1132	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	41.4835978296108	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCCATTTGTGCCAGAG	-65899300	True	NA	NA	False	ACTAAA	-14	NA	65900419	65892644	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65893297_65894013_65894117_65896808_65897007_65900240
transcript_36223.known	chr11	-	1559	2	FSM	ENSG00000175573.7	ENST00000449692.3	1559	2	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_1	0	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTCTTGGTGGTTACCT	-65917676	True	NA	-5	True	AATAAA	-38	NA	65919062	65916809	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65918216_65918909
transcript_36224.known	chr11	-	1562	2	FSM	ENSG00000175573.7	ENST00000438576.3	1562	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTCTTGGTGGTTACCT	-65917676	True	NA	-5	True	AATAAA	-38	NA	65919062	65916809	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65918219_65918909
transcript_36225.known	chr11	+	695	7	FSM	ENSG00000175550.8	ENST00000525501.5	695	7	0	0	0	0	multi-exon	TRUE	canonical	3	162	junction_3	634.460838472758	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATGAAGAGGACGAAGAAG	65919255	False	NA	NA	False	NA	NA	NA	65919273	65921401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65919544_65919779_65919853_65919947_65919998_65920415_65920463_65920568_65920663_65920883_65920973_65921329
transcript_36226.known	chr11	+	819	7	FSM	ENSG00000175550.8	ENST00000376991.6	819	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	711.197991654457	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGACCATAGCCCCTTTTA	65919316	False	NA	-85	True	NA	NA	NA	65919334	65921448	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65919544_65919779_65919853_65919947_65920042_65920342_65920463_65920547_65920663_65920883_65920973_65921329
transcript_36227.known	chr11	+	822	7	FSM	ENSG00000175550.8	ENST00000312515.7	822	7	0	0	0	0	multi-exon	FALSE	canonical	3	1418	junction_6	206.603014391261	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCTGCGCAGGACGTCAT	65906492	True	NA	30	True	AATAAA	-24	NA	65919425	65921563	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65919544_65919779_65919853_65919947_65920042_65920342_65920463_65920568_65920663_65920883_65920973_65921329
transcript_36229.known	chr11	+	751	6	FSM	ENSG00000175550.8	ENST00000532933.1	751	6	0	0	0	0	multi-exon	FALSE	canonical	3	1418	junction_5	223.170248913246	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCCAGGCTCTGCGCA	65919534	True	NA	21	True	AATAAA	-15	NA	65919723	65921554	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65919853_65919947_65920042_65920342_65920463_65920568_65920663_65920883_65920973_65921329
transcript_3623.known	chr1	-	3139	15	FSM	ENSG00000159423.17	ENST00000375341.8	3139	15	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_4	21.6257593944757	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGTGGTGGATGGTCTT	-18899444	True	NA	-5	True	AATAAA	-16	NA	18902555	18871429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_18872958_18874462_18874582_18875381_18875504_18876314_18876468_18877207_18877256_18877415_18877613_18879299_18879374_18881699_18881888_18883123_18883199_18883278_18883429_18885472_18885629_18886463_18886512_18889361_18889455_18890011_18890106_18902461
transcript_36231.known	chr11	+	1925	8	FSM	ENSG00000175513.9	ENST00000532620.5	1925	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	8.48046975980333	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACAGTATGAGATTTCT	NA	False	NA	14	True	ATTAAA	-12	NA	65945444	65959963	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65945823_65946879_65947017_65947109_65947829_65948000_65948149_65953566_65953738_65958882_65958983_65959189_65959315_65959816
transcript_36241.known	chr11	+	3557	20	FSM	ENSG00000175467.15	ENST00000312397.10	3557	20	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_6	50.7393535084931	1171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGGGTGAGGAAACTGT	65956190	True	NA	NA	False	AATAAA	-16	NA	65961733	65980137	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_65962094_65964073_65964132_65964514_65964571_65965091_65965219_65965341_65965448_65965701_65965780_65965886_65965987_65966075_65966219_65966349_65966557_65967258_65967384_65967470_65967587_65967678_65967822_65976394_65976569_65976655_65976767_65977013_65977102_65977562_65977654_65977763_65977900_65978599_65978690_65978792_65978915_65979011
transcript_36270.nic	chr11	-	2829	6	NIC	ENSG00000175376.9	novel	2887	6	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_5	42.9213233719558	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTGTGTGTATCTATC	-66000079	True	NA	0	True	AATAAA	-19	NA	66002169	65996544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_65998744_65999349_65999398_65999566_65999676_66000052_66000162_66000302_66000407_66001909
transcript_36271.known	chr11	-	808	6	FSM	ENSG00000175376.9	ENST00000529964.5	808	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	47.8806850410476	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGTTCTGGTGTCTGA	-66000076	True	NA	-9	True	ATTAAA	-16	NA	66002166	65998432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65998744_65999349_65999398_65999566_65999676_66000052_66000162_66000302_66000407_66002039
transcript_36272.known	chr11	-	889	6	FSM	ENSG00000175376.9	ENST00000527249.5	889	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	38.0263066836631	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGCCCCTGGCTCTTCT	-66000086	True	NA	NA	False	NA	NA	NA	66002176	65998566	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65998744_65999349_65999398_65999566_65999676_66000052_66000162_66000302_66000482_66001909
transcript_36273.known	chr11	-	2761	6	FSM	ENSG00000175376.9	ENST00000526451.5	2761	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	47.8806850410476	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTGTGTGTATCTATC	-66000066	True	NA	0	True	AATAAA	-19	NA	66002156	65996544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65998744_65999349_65999398_65999566_65999676_66000052_66000162_66000302_66000482_66002039
transcript_36274.known	chr11	-	2916	6	FSM	ENSG00000175376.9	ENST00000533544.6	2916	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	43.3008083065432	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTGTGTGTATCTATC	-66000067	True	NA	0	True	AATAAA	-19	NA	66002157	65996544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_65998744_65999349_65999398_65999566_65999676_66000052_66000162_66000302_66000506_66001909
transcript_36276.nic	chr11	-	1232	6	NIC	ENSG00000175376.9	novel	808	6	NA	NA	-284	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_5	42.9213233719558	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGTTCTGGTGTCTGA	-66002284	True	NA	-9	True	ATTAAA	-16	NA	66002460	65998432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_65998744_65999349_65999398_65999566_65999676_66000052_66000162_66000302_66000407_66001909
transcript_36282.known	chr11	+	946	3	FSM	ENSG00000175334.8	ENST00000445560.6	946	3	0	0	0	0	multi-exon	FALSE	canonical	3	781	junction_1	1596.5	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGGCTTTGTGCACTG	NA	False	NA	26	True	AATAAA	-15	NA	66002227	66004146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66002514_66003234_66003374_66003625
transcript_36283.known	chr11	+	731	3	FSM	ENSG00000175334.8	ENST00000312175.7	731	3	0	0	0	0	multi-exon	FALSE	canonical	3	2816	junction_1	579	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCTTTGTGCACTGAAA	65969626	True	NA	29	True	AATAAA	-18	NA	66002502	66004149	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66002571_66003234_66003374_66003625
transcript_36285.nnic	chr11	+	743	3	NNC	ENSG00000175334.8	novel	1135	3	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_1	1949.5	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGGCTTTGTGCACTG	66002691	False	NA	26	True	AATAAA	-15	NA	66002752	66004146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_66002836_66003234_66003374_66003625
transcript_36286.known	chr11	+	1135	3	FSM	ENSG00000175334.8	ENST00000533166.5	1135	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	1970	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGTGGCTTTCATGACT	66002519	False	NA	11	True	NA	NA	NA	66002580	66004131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66003071_66003234_66003374_66003625
transcript_36287.known	chr11	+	670	3	FSM	ENSG00000175334.8	ENST00000527348.1	670	3	0	0	0	0	multi-exon	FALSE	canonical	2	293	junction_1	1840.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGGGAGTTTTCTCCC	66001940	True	NA	NA	False	NA	NA	NA	66002781	66003898	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66003040_66003234_66003374_66003625
transcript_36288.known	chr11	+	251	2	FSM	ENSG00000175334.8	ENST00000524663.1	251	2	0	0	0	0	multi-exon	FALSE	canonical	3	817	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGGGAATGGCTGAAAGACA	66002209	False	NA	NA	False	AAGAAA	-15	NA	66002315	66003678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66002514_66003625
transcript_36289.known	chr11	+	612	2	FSM	ENSG00000175334.8	ENST00000524628.1	612	2	0	0	0	0	multi-exon	FALSE	canonical	3	826	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGGCTTTGTGCACTG	65969603	True	NA	26	True	AATAAA	-15	NA	66002479	66004146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66002571_66003625
transcript_3629.known	chr1	-	2957	14	FSM	ENSG00000159423.17	ENST00000538839.5	2957	14	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	46.5659804207361	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACAGTGGTGGATGGTC	-18899417	True	NA	-7	True	AATAAA	-14	NA	18902528	18871431	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_18872958_18874462_18874582_18875381_18875504_18877207_18877256_18877415_18877613_18879299_18879374_18881699_18881888_18883123_18883199_18883278_18883429_18885472_18885629_18886463_18886512_18889361_18889455_18890011_18890106_18902461
transcript_36290.known	chr11	+	592	3	FSM	ENSG00000175315.3	ENST00000312134.3	592	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	1	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTCTTCCAAGTGCTT	66011962	True	NA	12	True	AATAAA	-22	NA	66012007	66013505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66012285_66012825_66012952_66013316
transcript_36292.nnic	chr11	-	2142	4	NNC	ENSG00000175229.7	novel	3301	3	NA	NA	0	412	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_2	106.540550443899	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGTTGTATGTCAGTCATA	-66045721	True	NA	-2	True	AATAAA	-17	NA	66049161	66041951	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_66043678_66043889_66043918_66045290_66045528_66049010
transcript_36294.nnic	chr11	-	2183	4	NNC	ENSG00000175229.7	novel	3301	3	NA	NA	-4	410	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	91.4524770334601	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGAGTTGTATGTCAGTCA	-66045715	True	NA	-4	True	AATAAA	-15	NA	66049155	66041953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_66043678_66045290_66045528_66046891_66046969_66049010
transcript_36296.nnic	chr11	-	2418	3	NNC	ENSG00000175229.7	novel	3301	3	NA	NA	-64	412	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	113.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGTTGTATGTCAGTCATA	-66045785	True	NA	-2	True	AATAAA	-17	NA	66049225	66041951	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_66043918_66045290_66045528_66049010
transcript_36297.known	chr11	-	3301	3	FSM	ENSG00000175229.7	ENST00000312006.5	3301	3	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	17	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAAAGTGATCTATCCAAA	-66045721	True	NA	-3	True	AGTAAA	-14	NA	66049161	66040764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66043678_66045290_66045528_66049010
transcript_36298.known	chr11	-	678	2	FSM	ENSG00000175229.7	ENST00000527048.1	678	2	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTCTCCGAGCCCCCGT	-66045711	True	NA	NA	False	NA	NA	NA	66049151	66044990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66045528_66049010
transcript_363.known	chr1	+	637	2	FSM	ENSG00000187608.10	ENST00000649529.1	637	2	0	0	0	0	multi-exon	FALSE	canonical	3	560	junction_1	0	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCGCCTCTGTGTCTGTG	1009220	True	NA	6	True	AATAAA	-19	NA	1013496	1014540	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1013577_1013983
transcript_36304.known	chr11	+	841	8	FSM	ENSG00000087365.16	ENST00000524627.5	841	8	0	0	0	0	multi-exon	TRUE	canonical	3	329	junction_4	557.404956664619	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCTGCAGCTGAAGGAGA	66020453	True	NA	NA	False	NA	NA	NA	66052364	66058100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66052518_66052672_66052720_66053026_66053105_66055075_66055316_66055537_66055586_66056837_66056956_66057265_66057376_66058053
transcript_36305.known	chr11	+	1163	10	FSM	ENSG00000087365.16	ENST00000530322.5	1163	10	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_6	563.002861646566	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTACAAGGAGAGCACACTA	66020488	False	NA	NA	False	NA	NA	NA	66052399	66059044	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66052518_66052672_66052720_66053026_66053105_66055075_66055316_66055534_66055586_66056837_66056956_66057268_66057376_66058053_66058151_66058313_66058406_66058829
transcript_36306.known	chr11	+	1080	9	FSM	ENSG00000087365.16	ENST00000530981.1	1080	9	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_6	708.964462702469	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTCCCAAGGAAAGAGATG	66060614	True	NA	24	True	AATAAA	-4	NA	66060690	66068878	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66060732_66061685_66061776_66061890_66061999_66063008_66063117_66063399_66063543_66063627_66063730_66067948_66068046_66068147_66068334_66068673
transcript_36307.known	chr11	+	4571	24	FSM	ENSG00000175115.13	ENST00000320580.9	4571	24	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_11	14.5312387569321	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGGGCTTCTATGCCC	66069717	True	NA	14	True	AATAAA	-20	NA	66070271	66244744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66070843_66193485_66193574_66210361_66210452_66211133_66211260_66216118_66216264_66216519_66216612_66216694_66216776_66219745_66219806_66220630_66220792_66221153_66221248_66227503_66227585_66230547_66230664_66230804_66230941_66232171_66232277_66232959_66233067_66233784_66233940_66234131_66234243_66235300_66235404_66235897_66235941_66238803_66238847_66239141_66239278_66241426_66241654_66242911_66243032_66243164
transcript_36308.nic	chr11	+	2880	22	ISM	ENSG00000175115.13	ENST00000320580.9	4571	24	-10	3092	-10	104	5prime_fragment	FALSE	canonical	3	118	junction_11	15.1546824147842	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAGTACCCCCAAGGCCG	66070228	True	NA	NA	False	AAGAAA	-12	NA	66070261	66241652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_66070843_66193485_66193574_66210361_66210452_66211133_66211260_66216118_66216264_66216519_66216612_66216694_66216776_66219745_66219806_66220630_66220792_66221153_66221248_66227503_66227585_66230547_66230664_66230804_66230941_66232171_66232277_66232959_66233067_66233784_66233940_66234131_66234243_66235300_66235404_66235897_66235941_66238803_66238847_66239141_66239278_66241426
transcript_36317.known	chr11	+	3015	16	FSM	ENSG00000174996.12	ENST00000417856.5	3015	16	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	91.0344013119338	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGGCTTGTTTTGAGAC	66257274	False	NA	5	True	AATAAA	-16	NA	66257293	66267859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66257489_66258546_66258823_66261741_66261973_66262122_66262193_66262813_66263037_66263659_66263748_66263850_66263953_66264045_66264220_66264344_66264445_66265022_66265073_66265167_66265236_66265654_66265764_66265853_66266013_66266092_66266218_66266432_66266491_66266872
transcript_36322.known	chr11	+	2990	16	FSM	ENSG00000174996.12	ENST00000316924.9	2990	16	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	79.9539867673902	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCTTGTTTTGAGACG	66257634	True	NA	6	True	AATAAA	-17	NA	66257702	66267860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66257872_66258546_66258823_66261741_66261973_66262122_66262193_66262813_66263037_66263659_66263748_66263850_66263953_66264045_66264220_66264344_66264445_66265022_66265073_66265167_66265236_66265654_66265764_66265853_66266013_66266092_66266218_66266432_66266491_66266872
transcript_36325.known	chr11	+	2953	16	FSM	ENSG00000174996.12	ENST00000394067.7	2953	16	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_1	36.1689861007404	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCTTGTTTTGAGACG	66257634	True	NA	6	True	AATAAA	-17	NA	66257702	66267860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66257872_66258583_66258823_66261741_66261973_66262122_66262193_66262813_66263037_66263659_66263748_66263850_66263953_66264045_66264220_66264344_66264445_66265022_66265073_66265167_66265236_66265654_66265764_66265853_66266013_66266092_66266218_66266432_66266491_66266872
transcript_36362.known	chr11	-	1097	8	FSM	ENSG00000174851.16	ENST00000376901.9	1097	8	0	0	0	0	multi-exon	FALSE	canonical	3	1181	junction_3	125.100775703561	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTGACCCTTGTTCC	-66275628	True	NA	-4	True	NA	NA	NA	66289143	66284579	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66284784_66284872_66284967_66285380_66285537_66285700_66285759_66287597_66287677_66287811_66287917_66288080_66288293_66288954
transcript_36373.known	chr11	-	943	7	FSM	ENSG00000174851.16	ENST00000359461.10	943	7	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_2	452.561843533259	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTGACCCTTGTTCC	-66275630	True	NA	-4	True	NA	NA	NA	66289145	66284579	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66284784_66284872_66284967_66285700_66285759_66287597_66287677_66287811_66287917_66288080_66288293_66288954
transcript_36383.known	chr11	-	1042	4	FSM	ENSG00000174851.16	ENST00000376899.8	1042	4	0	0	0	0	multi-exon	FALSE	canonical	3	1442	junction_3	48.2101879504968	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTGCTTGTCCTCCAAG	-66275628	True	NA	NA	False	NA	NA	NA	66289143	66287140	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66287677_66287811_66287917_66288080_66288293_66288954
transcript_36384.known	chr11	+	1901	6	FSM	ENSG00000174903.16	ENST00000311481.11	1901	6	0	0	0	0	multi-exon	FALSE	canonical	3	940	junction_5	66.5714653586655	2198	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGGTGGCCAAGTGTGG	66259224	True	NA	32	True	AATAAA	-43	NA	66268638	66277492	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66268694_66271796_66271870_66272156_66272253_66272364_66272461_66275803_66275936_66276043
transcript_36385.known	chr11	+	2538	2	FSM	ENSG00000179292.5	ENST00000327259.5	2538	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGTGCATTCCTGGGTC	66291718	True	NA	4	True	AATAAA	-15	NA	66291893	66296664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66292089_66294321
transcript_36386.known	chr11	-	2551	1	FSM	ENSG00000174807.4	ENST00000311330.4	2551	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGGCTTCTGACCCCCA	-66316896	True	NA	-7	True	AATAAA	-17	NA	66317044	66314493	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66314500_66317000
transcript_36388.known	chr11	-	1363	10	FSM	ENSG00000174744.14	ENST00000425825.6	1363	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	111.641732981936	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCCCTGTGTGTGTGTGT	-66341233	True	NA	-5	True	ATTAAA	-20	NA	66345119	66337332	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66337808_66338242_66338283_66338720_66338786_66340120_66340214_66340773_66340871_66340966_66341047_66341205_66341334_66341532_66341624_66342095_66342242_66344971
transcript_36390.known	chr11	-	1424	10	FSM	ENSG00000174744.14	ENST00000359957.8	1424	10	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_1	23.7897166289124	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCGTGCCCTGTGTGT	-66341218	True	NA	-11	True	ATTAAA	-14	NA	66345104	66337338	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66337890_66338242_66338283_66338720_66338786_66340120_66340214_66340773_66340871_66340966_66341047_66341205_66341334_66341532_66341624_66342095_66342242_66344971
transcript_36394.known	chr11	-	1817	9	FSM	ENSG00000174744.14	ENST00000530238.5	1817	9	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_1	25.219040425837	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGGACTGGAATTAAAACC	-66341203	True	NA	-41	True	NA	NA	NA	66345089	66337368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66337890_66338242_66338786_66340120_66340214_66340773_66340871_66340966_66341047_66341205_66341334_66341532_66341624_66342095_66342242_66344971
transcript_36395.known	chr11	-	913	9	FSM	ENSG00000174744.14	ENST00000527375.5	913	9	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_5	157.992879586391	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCCAGGCTCCTGTGG	-66341193	True	NA	NA	False	NA	NA	NA	66345079	66337777	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66337890_66338720_66338786_66340120_66340214_66340773_66340871_66340966_66341047_66341212_66341334_66341532_66341624_66342095_66342242_66344971
transcript_36402.known	chr11	-	2007	2	FSM	ENSG00000174684.7	ENST00000311181.5	2007	2	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_1	0	283	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGGCTCCGTTACTCTC	-66345605	True	NA	-2	True	AATAAA	-17	NA	66347629	66345373	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66346241_66346489
transcript_36406.known	chr11	-	2505	13	FSM	ENSG00000174669.12	ENST00000544554.5	2505	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	59.7677797814173	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGCGTTCACCAAGTCT	-66372102	False	NA	-35	True	NA	NA	NA	66372174	66362521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66363548_66364224_66364425_66365935_66366022_66366125_66366232_66366430_66366565_66367463_66367549_66367771_66367870_66368536_66368672_66369059_66369200_66369368_66369533_66371243_66371326_66371562_66371647_66372009
transcript_36426.known	chr11	+	286	2	FSM	ENSG00000255468.7	ENST00000581155.5	286	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGTGTGTGTGCTGACT	66347923	False	NA	NA	False	NA	NA	NA	66347949	66353619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66348071_66353454
transcript_36427.known	chr11	-	2455	12	FSM	ENSG00000174669.12	ENST00000357440.7	2455	12	0	0	0	0	multi-exon	TRUE	canonical	3	101	junction_9	39.0123947246098	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCGTTCACCAAGTCTT	-66367746	True	NA	-34	True	NA	NA	NA	66371760	66362520	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66363548_66364224_66364425_66365935_66366022_66366125_66366232_66366430_66366565_66367463_66367549_66367771_66367870_66368536_66368672_66369059_66369200_66369368_66369533_66371243_66371326_66371562
transcript_36428.known	chr11	-	2509	13	FSM	ENSG00000174669.12	ENST00000546034.1	2509	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_12	59.1227536571158	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATGCGTTCACCAAGTC	-66372142	False	NA	-36	True	NA	NA	NA	66372214	66362522	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66363548_66364224_66364425_66365935_66366022_66366125_66366232_66366430_66366565_66367463_66367549_66367771_66367870_66368536_66368672_66369059_66369200_66369368_66369533_66371243_66371326_66371562_66371612_66372009
transcript_36429.known	chr11	-	2380	11	FSM	ENSG00000174669.12	ENST00000619145.4	2380	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	60.4486558990355	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGCGTTCACCAAGTCT	-66371748	False	NA	-35	True	NA	NA	NA	66371820	66362521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66363548_66364224_66364425_66365935_66366022_66366125_66366232_66367463_66367549_66367771_66367870_66368536_66368672_66369059_66369200_66369368_66369533_66371243_66371326_66371562
transcript_36430.known	chr11	-	2474	12	FSM	ENSG00000174669.12	ENST00000540386.5	2474	12	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	55.2695872313814	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGCGTTCACCAAGTCT	-66371748	False	NA	-35	True	NA	NA	NA	66371820	66362521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66363548_66364224_66364425_66365935_66366022_66366125_66366192_66366430_66366565_66367463_66367549_66367771_66367870_66368536_66368672_66369059_66369200_66369368_66369533_66371243_66371326_66371562
transcript_36431.known	chr11	-	2272	12	FSM	ENSG00000174669.12	ENST00000541567.5	2272	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	59.3639844066089	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATGCGTTCACCAAGTC	-66367633	True	NA	-36	True	NA	NA	NA	66371647	66362522	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66363548_66364224_66364425_66365935_66366022_66366125_66366232_66366430_66366565_66367463_66367549_66367771_66367870_66368536_66368672_66369059_66369132_66369368_66369533_66371243_66371326_66371562
transcript_36437.known	chr11	+	637	2	FSM	ENSG00000254510.3	ENST00000689212.1	2199	2	1462	100	1452	6	multi-exon	FALSE	canonical	2	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGATGCCATCACCTCTTC	66410650	False	NA	NA	False	AATAAA	-23	NA	66410671	66417127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66410974_66416792
transcript_36446.known	chr11	+	3078	18	FSM	ENSG00000254986.8	ENST00000532677.5	3078	18	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	60.0295198431168	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGCGGCGTGTGTGGCT	66479914	True	NA	18	True	AATAAA	-19	NA	66480012	66509657	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66480466_66482195_66482471_66485172_66485263_66486539_66486678_66487267_66487343_66487913_66488008_66491252_66491384_66491493_66491625_66491697_66491757_66492715_66492911_66493066_66493180_66493540_66493634_66495205_66495269_66495364_66495490_66495629_66495751_66497297_66497478_66504611_66504775_66509078
transcript_36452.known	chr11	+	2676	18	FSM	ENSG00000254986.8	ENST00000541961.5	2676	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	92.4423321594955	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGCGGCGTGTGTGGCT	66473519	True	NA	18	True	AATAAA	-19	NA	66480430	66509657	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66480466_66482179_66482471_66485172_66485263_66486539_66486678_66487267_66487343_66487913_66488008_66491252_66491384_66491493_66491625_66491697_66491757_66492715_66492911_66493066_66493180_66493540_66493634_66495205_66495269_66495364_66495490_66495629_66495751_66497297_66497478_66504611_66504775_66509078
transcript_36464.nic	chr11	+	2786	17	NIC	ENSG00000254986.8	novel	3078	18	NA	NA	-30	0	intron_retention	FALSE	canonical	3	145	junction_1	61.8768939104089	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGCGGCGTGTGTGGCT	66473489	True	NA	18	True	AATAAA	-19	NA	66480400	66509657	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_66480466_66482195_66482471_66485172_66485263_66486539_66486678_66487267_66487343_66487913_66488008_66491252_66491384_66491493_66491625_66491697_66491757_66492715_66492911_66493066_66493180_66493540_66493634_66495205_66495490_66495629_66495751_66497297_66497478_66504611_66504775_66509078
transcript_36469.known	chr11	+	2251	17	FSM	ENSG00000254986.8	ENST00000530165.5	2251	17	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_2	105.998157413231	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGAGCTTGGACCTTGGT	66473526	True	NA	NA	False	GGGGCT	-15	NA	66480437	66509345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66480466_66482195_66482471_66486539_66486678_66487267_66487343_66487913_66488008_66491252_66491384_66491493_66491625_66491697_66491757_66492715_66492911_66493066_66493180_66493540_66493634_66495205_66495269_66495364_66495490_66495629_66495751_66497297_66497478_66504611_66504775_66509078
transcript_36473.nic	chr11	+	3174	17	NIC	ENSG00000254986.8	novel	2660	18	NA	NA	3	0	intron_retention	FALSE	canonical	3	105	junction_1	70.9224929059886	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGCGGCGTGTGTGGCT	66479917	True	NA	18	True	AATAAA	-19	NA	66480015	66509657	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_66480466_66482192_66482471_66485172_66485263_66486539_66486678_66487267_66487343_66487913_66488008_66491252_66491384_66491493_66491625_66491697_66491757_66492715_66492911_66493066_66493180_66493540_66493634_66495205_66495490_66495629_66495751_66497297_66497478_66504611_66504775_66509078
transcript_36480.known	chr11	+	3368	17	FSM	ENSG00000174483.20	ENST00000318312.12	3368	17	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_9	11.4221208078885	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTTTTAATGGAGTTA	66508279	True	NA	7	True	ATTAAA	-15	NA	66510634	66533598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66510707_66511012_66511090_66511204_66511240_66514405_66514679_66515539_66515587_66515692_66515732_66515860_66515934_66519616_66519749_66521269_66521377_66523455_66523577_66523723_66523883_66526122_66526193_66526648_66526808_66529818_66529953_66530893_66531029_66531655_66531743_66531950
transcript_3649.known	chr1	-	5408	23	FSM	ENSG00000127463.16	ENST00000375199.7	5408	23	0	0	0	0	multi-exon	TRUE	canonical	3	49	junction_14	65.8121544201486	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAAAAAAATTAG	-19245632	True	NA	NA	False	NA	NA	NA	19251509	19216873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_19219483_19219568_19219699_19220763_19220849_19222623_19222835_19223395_19223570_19227312_19227451_19230843_19230964_19231260_19231423_19232623_19232774_19232935_19233136_19235129_19235253_19237141_19237239_19238016_19238140_19238794_19238855_19239230_19239303_19239817_19239986_19240296_19240447_19241015_19241143_19242344_19242474_19243613_19243708_19243949_19244016_19244905_19245031_19251414
transcript_365.known	chr1	+	977	4	FSM	ENSG00000217801.11	ENST00000427998.6	982	4	5	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3.74165738677394	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTTGCCTCGGCACCTA	1059484	True	NA	20	True	NA	NA	NA	1059733	1066456	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1059847_1060279_1060394_1063078_1063202_1065829
transcript_36501.known	chr11	+	1934	16	FSM	ENSG00000174483.20	ENST00000630659.2	1934	16	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	19.5625492544641	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCGGCTCAACTCCTCCC	66508299	True	NA	NA	False	NA	NA	NA	66510654	66532219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66510707_66511012_66511090_66514405_66514679_66515539_66515587_66515692_66515732_66515860_66515934_66519616_66519749_66521269_66521377_66523455_66523577_66523723_66523883_66526122_66526193_66526648_66526808_66529818_66529953_66530893_66531029_66531655_66531743_66531950
transcript_36527.known	chr11	+	2704	8	FSM	ENSG00000174516.15	ENST00000320740.12	2704	8	0	0	0	0	multi-exon	FALSE	canonical	2	28	junction_3	9.60654538768824	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCGGGCTCTGCTTCTTGG	66466501	True	NA	14	True	NA	NA	NA	66466904	66477337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66467028_66468127_66468281_66468832_66468905_66471241_66471372_66472368_66472471_66473240_66473436_66473736_66473926_66475597
transcript_36532.known	chr11	+	2783	7	FSM	ENSG00000174516.15	ENST00000349459.10	2783	7	0	0	0	0	multi-exon	FALSE	canonical	2	31	junction_2	8.59101597923991	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCCAGACACCGGGCTCT	NA	False	NA	5	True	NA	NA	NA	66466744	66477328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66467028_66468127_66468281_66471241_66471372_66472368_66472471_66473240_66473436_66473736_66473926_66475597
transcript_36536.known	chr11	+	964	6	FSM	ENSG00000174516.15	ENST00000526296.5	964	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	18.8191391939164	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCACGTCCATGGCTACCA	66466522	True	NA	NA	False	NA	NA	NA	66466925	66475843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66467028_66471241_66471372_66472368_66472471_66473240_66473436_66473736_66473926_66475597
transcript_36537.known	chr11	-	922	6	FSM	ENSG00000174547.13	ENST00000329819.4	922	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	790.278077641029	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACTGTCATCTTCTATCT	-66420327	True	NA	-10	True	AATAAA	-13	NA	66438834	66435837	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66436113_66436815_66436910_66437103_66437264_66437349_66437444_66438163_66438260_66438631
transcript_36544.known	chr11	-	812	5	FSM	ENSG00000174547.13	ENST00000534488.5	812	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	725.091847630354	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACTGTCATCTTCTATCT	-66420319	True	NA	-10	True	AATAAA	-13	NA	66438826	66435837	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66436113_66437103_66437264_66437349_66437436_66438163_66438260_66438631
transcript_36545.known	chr11	-	1527	5	FSM	ENSG00000174547.13	ENST00000430466.6	1527	5	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_4	606.881938683299	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAGACTTCTGCCAATAT	-66420341	True	NA	-15	True	AATAAA	-25	NA	66438848	66435074	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66436113_66437103_66437264_66437349_66437444_66438163_66438260_66438709
transcript_36547.known	chr11	-	2209	5	FSM	ENSG00000174547.13	ENST00000524576.5	2209	5	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_4	728.260384409313	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGATGAGACTTCTGCC	NA	False	NA	-20	True	AATAAA	-20	NA	66466738	66435079	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66436113_66437103_66437264_66437349_66437444_66438163_66438260_66465912
transcript_36548.known	chr11	-	1615	5	FSM	ENSG00000174165.8	ENST00000534073.5	1615	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	48.8492579268099	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTACCTCAATATGATGG	-66544530	True	NA	-16	True	AATAAA	-3	NA	66546036	66520636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66521467_66524154_66524277_66526935_66527007_66543703_66543982_66545722
transcript_36555.known	chr11	-	4803	3	FSM	ENSG00000174165.8	ENST00000310442.5	4803	3	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	4.5	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCATGCCTTTTTAAATTG	-66544542	True	NA	NA	False	AATAAA	-23	NA	66546048	66535625	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66539825_66543703_66543982_66545722
transcript_36556.known	chr11	-	944	2	FSM	ENSG00000255517.7	ENST00000527274.3	982	2	38	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGTGTCTGGAGAGTGC	-66479953	True	NA	NA	False	ATTAAA	-24	NA	66480231	66477345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66478097_66480038
transcript_36561.known	chr11	+	2882	21	FSM	ENSG00000248746.6	ENST00000513398.2	2882	21	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_12	21.6416265562457	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTTTAGTTCCTGAAG	66544779	True	NA	12	True	AATAAA	-25	NA	66546902	66563334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66547085_66551238_66551354_66551527_66551648_66554044_66554132_66554535_66554624_66555129_66555209_66555285_66555368_66556144_66556231_66557132_66557226_66557698_66557930_66558026_66558175_66559235_66559387_66559967_66560077_66560170_66560312_66560572_66560756_66561226_66561362_66561457_66561638_66562021_66562169_66562256_66562323_66562795_66562955_66563034
transcript_36563.nic	chr11	+	3096	21	NIC	ENSG00000248746.6	novel	2882	21	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	27.1069640498526	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTTTAGTTCCTGAAG	66544751	True	NA	12	True	AATAAA	-25	NA	66546874	66563334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_66547085_66551052_66551354_66551527_66551648_66554044_66554132_66554535_66554624_66555129_66555209_66555285_66555368_66556144_66556231_66557132_66557226_66557698_66557930_66558026_66558175_66559235_66559387_66559967_66560077_66560170_66560312_66560572_66560756_66561226_66561362_66561457_66561638_66562021_66562169_66562256_66562323_66562795_66562955_66563034
transcript_36564.nic	chr11	+	3547	20	NIC	ENSG00000248746.6	novel	2882	21	NA	NA	-84	0	intron_retention	FALSE	canonical	3	45	junction_9	19.4112798118393	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTTTAGTTCCTGAAG	66546786	False	NA	12	True	AATAAA	-25	NA	66546818	66563334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_66547085_66551238_66551354_66551527_66551648_66554044_66554132_66554535_66554624_66555129_66555209_66555285_66555368_66556144_66556231_66557132_66557226_66557698_66557930_66558026_66558175_66559235_66560077_66560170_66560312_66560572_66560756_66561226_66561362_66561457_66561638_66562021_66562169_66562256_66562323_66562795_66562955_66563034
transcript_36569.nic	chr11	+	2959	20	NIC	ENSG00000248746.6	novel	2882	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	38	junction_11	22.0294439079148	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTTTAGTTCCTGAAG	66544779	True	NA	12	True	AATAAA	-25	NA	66546902	66563334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_66547085_66551238_66551354_66551527_66551648_66554044_66554132_66554535_66554624_66555129_66555368_66556144_66556231_66557132_66557226_66557698_66557930_66558026_66558175_66559235_66559387_66559967_66560077_66560170_66560312_66560572_66560756_66561226_66561362_66561457_66561638_66562021_66562169_66562256_66562323_66562795_66562955_66563034
transcript_36573.nic	chr11	+	3934	19	NIC	ENSG00000248746.6	novel	2882	21	NA	NA	2	0	intron_retention	FALSE	canonical	3	59	junction_10	17.2666988416689	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTTTAGTTCCTGAAG	66544781	True	NA	12	True	AATAAA	-25	NA	66546904	66563334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_66547085_66551238_66551354_66551527_66551648_66554044_66554132_66554535_66554624_66555129_66555209_66555285_66555368_66556144_66556231_66557132_66557930_66558026_66558175_66559235_66560077_66560170_66560312_66560572_66560756_66561226_66561362_66561457_66561638_66562021_66562169_66562256_66562323_66562795_66562955_66563034
transcript_36574.nic	chr11	+	3540	19	NIC	ENSG00000248746.6	novel	2882	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	45	junction_8	19.6440547975434	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTTTAGTTCCTGAAG	66544779	True	NA	12	True	AATAAA	-25	NA	66546902	66563334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_66547085_66551238_66551354_66551527_66551648_66554044_66554132_66554535_66554624_66555129_66555368_66556144_66556231_66557132_66557226_66557698_66557930_66558026_66558175_66559235_66560077_66560170_66560312_66560572_66560756_66561226_66561362_66561457_66561638_66562021_66562169_66562256_66562323_66562795_66562955_66563034
transcript_36581.known	chr11	-	1709	13	FSM	ENSG00000174080.12	ENST00000524994.6	1709	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	12.2005805872781	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTGGGGCACAGCCCCT	-66568133	True	NA	NA	False	NA	NA	NA	66568606	66563795	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66564008_66564087_66564147_66564557_66564649_66564741_66564807_66564886_66565007_66565670_66565752_66565830_66565928_66566021_66566168_66566290_66566402_66567245_66567322_66567443_66567663_66567983_66568083_66568273
transcript_36584.known	chr11	-	1934	12	FSM	ENSG00000174080.12	ENST00000678413.1	1934	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	12.6999707164366	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCTGTGGCGTGAACACC	-66568133	True	NA	NA	False	NA	NA	NA	66568606	66563979	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66564008_66564087_66564649_66564741_66564807_66564886_66565007_66565670_66565752_66565830_66565928_66566021_66566163_66566290_66566405_66567245_66567322_66567443_66567663_66567983_66568083_66568273
transcript_36585.known	chr11	-	2045	11	FSM	ENSG00000174080.12	ENST00000677526.1	2045	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	13.3195345264014	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCCCTGCACCCCATTC	-66568133	True	NA	NA	False	NA	NA	NA	66568606	66563776	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66564008_66564087_66564649_66564741_66564807_66564886_66565007_66565670_66565752_66566021_66566168_66566290_66566405_66567245_66567322_66567443_66567663_66567983_66568083_66568273
transcript_36590.known	chr11	-	2888	1	FSM	ENSG00000182791.5	ENST00000333861.5	2888	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTGAGACCTTGGAGTTA	-66592935	True	NA	NA	False	AATACA	-23	NA	66593063	66590175	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66590200_66593100
transcript_36595.known	chr11	+	1214	8	FSM	ENSG00000173992.9	ENST00000530961.5	1214	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	52.6358301183224	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTTATTTTCGTTTGGG	66589818	True	NA	-1	True	NA	NA	NA	66593200	66605998	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66593301_66593641_66593715_66599115_66599254_66599458_66599637_66600488_66600550_66605153_66605417_66605488_66605593_66605701
transcript_36596.known	chr11	+	1066	8	FSM	ENSG00000173992.9	ENST00000533244.6	1066	8	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_3	27.0735958423837	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGTTTTGTGCTTGTC	66589802	True	NA	20	True	AATGAA	-21	NA	66593184	66606019	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66593301_66593641_66593715_66599115_66599254_66599458_66599637_66600488_66600550_66605338_66605417_66605488_66605593_66605701
transcript_36600.nic	chr11	+	1701	7	NIC	ENSG00000173992.9	novel	1214	8	NA	NA	-215	0	intron_retention	FALSE	canonical	3	22	junction_4	54.2494239600754	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTGGTGTTTTGTGCTTG	66592922	True	NA	18	True	AATGAA	-19	NA	66592937	66606017	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_66593301_66593641_66593715_66599115_66599637_66600488_66600550_66605153_66605417_66605488_66605593_66605701
transcript_36601.known	chr11	+	1196	7	FSM	ENSG00000173992.9	ENST00000530384.5	1196	7	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_3	15.0517625398342	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGGGCCAGAGGGACTTT	66589770	True	NA	-87	True	NA	NA	NA	66593152	66605912	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66593301_66593641_66593715_66599115_66599637_66600488_66600550_66605338_66605417_66605488_66605593_66605701
transcript_36609.nic	chr11	+	2345	6	NIC	ENSG00000173992.9	novel	1214	8	NA	NA	-7	0	intron_retention	FALSE	canonical	3	22	junction_3	59.4191888197744	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTGGTGTTTTGTGCTTG	66589763	True	NA	18	True	AATGAA	-19	NA	66593145	66606017	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_66593301_66593641_66593715_66599115_66600550_66605153_66605417_66605488_66605593_66605701
transcript_36610.nic	chr11	+	2157	6	NIC	ENSG00000173992.9	novel	1196	7	NA	NA	-4	0	intron_retention	FALSE	canonical	3	148	junction_1	13.4966662550424	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTGGTGTTTTGTGCTTG	66589766	True	NA	18	True	AATGAA	-19	NA	66593148	66606017	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_66593301_66593641_66593715_66599115_66600550_66605338_66605417_66605488_66605593_66605701
transcript_36620.known	chr11	+	872	3	FSM	ENSG00000173992.9	ENST00000526066.5	872	3	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	8.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTGGGGTTTGAGTCAA	66589807	True	NA	NA	False	NA	NA	NA	66593189	66599803	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66593301_66593641_66593715_66599115
transcript_36656.known	chr11	+	1763	4	FSM	ENSG00000173933.21	ENST00000408993.6	1763	4	0	0	0	0	multi-exon	TRUE	canonical	3	84	junction_1	184.083918061543	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTTTTTCAACTTAGGGT	66624590	True	NA	4	True	NA	NA	NA	66638671	66646452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66638894_66639699_66640124_66643449_66644141_66646026
transcript_36662.known	chr11	-	1806	4	FSM	ENSG00000173914.12	ENST00000310046.9	1806	4	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	52.1045956599693	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTTTATGTTTGTCTT	-66675557	True	NA	-4	True	AATAAA	-18	NA	66677887	66664997	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66665579_66668614_66669292_66676667_66677092_66677763
transcript_36663.known	chr11	+	1426	3	FSM	ENSG00000239306.5	ENST00000393979.3	1426	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	230	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTTGTCATTGTCTTGA	66615290	True	NA	23	True	AATAAA	-27	NA	66616625	66627343	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66617058_66624213_66624325_66626460
transcript_36666.known	chr11	+	5367	3	FSM	ENSG00000239306.5	ENST00000310137.5	5367	3	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_2	24.5	3269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCTGTGGTGGCATGCA	66615294	True	NA	NA	False	AAGAAA	-13	NA	66616629	66629934	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66617058_66624213_66625679_66626460
transcript_36667.known	chr11	+	876	3	FSM	ENSG00000239306.5	ENST00000409372.1	876	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	14.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCGTCCGTGTCACTGGG	66615294	True	NA	NA	False	NA	NA	NA	66616629	66624593	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66617058_66623900_66623969_66624213
transcript_36675.known	chr11	+	1011	3	FSM	ENSG00000173933.21	ENST00000530235.1	1011	3	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	62	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCGGTGAAATAAATGGTTT	66624638	True	NA	-9	True	NA	NA	NA	66638719	66646439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66638894_66639699_66640124_66646026
transcript_3668.known	chr1	-	4084	22	FSM	ENSG00000127463.16	ENST00000375208.7	4084	22	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_20	78.064860526229	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGCCCTGTGGTGAAAGAG	-19245645	True	NA	58	True	NA	NA	NA	19251522	19218147	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_19219483_19219568_19219699_19220763_19220849_19222623_19222835_19223395_19223570_19227312_19227451_19230843_19230964_19231260_19231423_19232623_19232774_19232935_19233136_19235129_19235253_19237141_19237239_19238016_19238140_19238794_19238858_19239230_19239303_19239817_19239986_19240296_19240447_19241015_19241143_19242344_19242474_19243613_19243708_19244905_19245031_19251414
transcript_36680.known	chr11	-	769	3	FSM	ENSG00000173914.12	ENST00000531969.5	769	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	96	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGCTTTCCCTAGGAGT	-66675494	True	NA	NA	False	NA	NA	NA	66677824	66665294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66665579_66676667_66677092_66677763
transcript_36687.known	chr11	+	372	2	FSM	ENSG00000239306.5	ENST00000409738.4	372	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGATTACCGCCGTTTA	66615379	False	NA	NA	False	NA	NA	NA	66616714	66626489	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66617058_66626460
transcript_36688.known	chr11	+	829	2	FSM	ENSG00000248643.5	ENST00000500635.2	829	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTATGTGTGCTTTGCGA	66615334	True	NA	19	True	AATAAA	-15	NA	66616669	66646467	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66617058_66646026
transcript_36689.known	chr11	+	757	2	FSM	ENSG00000173933.21	ENST00000532968.1	757	2	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGCTTTACCTTAGGCAAA	66624645	True	NA	NA	False	NA	NA	NA	66638726	66640289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66638894_66639699
transcript_36690.known	chr11	-	1646	2	FSM	ENSG00000173914.12	ENST00000531036.2	1646	2	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAGAAAAATAATGGGAGAA	-66675547	True	NA	34	True	ATTAAA	-15	NA	66677877	66675559	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66677092_66677763
transcript_36696.known	chr11	+	1607	4	FSM	ENSG00000173933.21	ENST00000310092.12	1607	4	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_3	60.1054628687498	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTATGTGTGCTTTGCGAG	66624621	True	NA	20	True	AATAAA	-16	NA	66638702	66646468	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66638753_66639699_66640124_66643449_66644141_66646026
transcript_36697.known	chr11	+	3029	3	FSM	ENSG00000173933.21	ENST00000396053.9	3029	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	265	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAACTGAATTTGTTGTT	66624585	True	NA	NA	False	ATTAAA	-14	NA	66638666	66668374	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66638753_66639699_66640124_66665855
transcript_36698.known	chr11	+	654	3	FSM	ENSG00000173933.21	ENST00000506523.6	654	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	290	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCATTTCACTGTTCATTC	66624636	True	NA	3	True	AATAAA	-18	NA	66638717	66649930	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66638753_66639699_66640124_66649735
transcript_36699.known	chr11	+	921	3	FSM	ENSG00000173933.21	ENST00000398692.8	921	3	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_2	197	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTATGTGTGCTTTGCGAG	66624616	True	NA	20	True	AATAAA	-16	NA	66638697	66646468	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66638753_66639699_66640124_66646026
transcript_36700.known	chr11	+	1548	2	FSM	ENSG00000173933.21	ENST00000483858.5	1548	2	0	0	0	0	multi-exon	FALSE	canonical	3	602	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTATTTCCGTGACTCC	66624616	True	NA	17	True	AATAAA	-27	NA	66638697	66641192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66638753_66639699
transcript_36701.known	chr11	-	7446	36	FSM	ENSG00000173898.15	ENST00000617502.5	7446	36	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_35	23.1448676375386	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGGGCAAGGTCCCAGGC	-66718860	False	180	NA	False	NA	NA	NA	66718872	66685870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66686105_66686397_66686441_66686993_66687168_66687426_66687648_66687867_66687919_66688003_66688080_66688168_66688312_66688652_66688850_66689095_66689181_66689804_66689944_66690038_66690284_66691283_66691659_66692535_66692741_66692969_66693101_66693185_66693447_66693771_66693862_66694138_66694364_66696276_66696541_66698638_66698786_66698991_66699083_66699405_66699609_66700525_66701283_66701583_66701722_66704597_66705469_66705683_66705838_66707515_66707819_66708140_66708300_66708901_66709020_66710581_66710770_66710916_66711030_66713630_66713747_66714090_66714172_66714315_66714408_66715221_66715396_66715829_66715982_66718442
transcript_36709.nic	chr11	+	2176	17	NIC	ENSG00000173715.18	novel	2135	17	NA	NA	-42	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_5	52.1694579591354	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTCTTCCGCGTCTGCTT	66742766	True	NA	28	True	AATAAA	-20	NA	66744693	66843324	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_66744920_66748378_66748518_66756352_66756506_66759042_66759097_66788159_66788270_66796280_66796365_66800640_66800697_66801030_66801103_66803994_66804191_66813864_66814016_66816052_66816200_66821642_66821765_66822563_66822675_66828265_66828365_66838366_66838446_66842848_66843070_66843168
transcript_36710.nic	chr11	+	2173	17	NIC	ENSG00000173715.18	novel	2135	17	NA	NA	-42	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_5	52.9616606612746	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTCTTCCGCGTCTGCTT	66742766	True	NA	28	True	AATAAA	-20	NA	66744693	66843324	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_66744920_66748378_66748518_66756352_66756506_66759042_66759097_66788159_66788270_66796280_66796365_66800640_66800697_66801030_66801103_66803994_66804191_66813864_66814016_66816052_66816200_66821642_66821765_66822563_66822675_66828265_66828365_66838369_66838446_66842848_66843070_66843168
transcript_36711.known	chr11	+	2135	17	FSM	ENSG00000173715.18	ENST00000525908.6	2135	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	53.5465626814644	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCGCGTCTGCTTCCGC	66742808	True	NA	32	True	AATAAA	-24	NA	66744735	66843328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66744920_66748378_66748518_66756352_66756506_66759042_66759097_66788159_66788270_66796280_66796365_66800640_66800697_66801030_66801103_66803997_66804191_66813864_66814016_66816052_66816200_66821642_66821765_66822563_66822675_66828265_66828365_66838366_66838446_66842848_66843070_66843168
transcript_3672.nnic	chr1	-	3310	22	NIC	ENSG00000127463.16	novel	6640	23	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_13	71.1295965202516	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTACTTTGCCTTTTGTG	-19245665	True	NA	-14	True	TTTAAA	-4	NA	19251542	19218944	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_19219483_19219568_19219699_19220763_19220849_19222623_19222835_19223395_19223570_19227312_19227451_19230843_19230964_19231260_19231423_19232623_19232774_19232935_19233136_19235129_19235253_19237141_19237239_19238016_19238140_19239230_19239303_19239817_19239986_19240296_19240447_19241015_19241143_19242344_19242474_19243613_19243708_19243949_19244016_19244905_19245031_19251414
transcript_36722.known	chr11	+	1734	16	FSM	ENSG00000173715.18	ENST00000642265.1	1734	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	54.2990075620377	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGTCCCCTTCCGCAAG	66742962	False	NA	-62	True	NA	NA	NA	66744889	66843234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66744920_66748378_66748518_66759042_66759097_66788159_66788270_66796280_66796365_66800640_66800697_66801030_66801103_66803997_66804191_66813864_66814016_66816052_66816200_66821642_66821765_66822563_66822675_66828265_66828365_66838366_66838446_66842848_66843070_66843168
transcript_36740.known	chr11	+	1998	15	FSM	ENSG00000173715.18	ENST00000540737.7	1998	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	50.6383737689036	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGAGTCGGCGGCGCTGGGC	66742841	True	NA	NA	False	NA	NA	NA	66744768	66843516	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66744920_66759042_66759097_66788159_66788270_66796280_66796365_66800640_66800697_66801030_66801103_66803994_66804191_66813864_66814016_66816052_66816200_66821642_66821765_66822563_66822675_66828265_66828365_66838369_66838446_66842848_66843070_66843168
transcript_36756.known	chr11	+	1666	14	FSM	ENSG00000173715.18	ENST00000527634.5	1666	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	44.0639664135524	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTGGTTTAATAAAGCTGC	66742843	True	NA	-6	True	NA	NA	NA	66744770	66843290	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66744920_66759042_66759097_66796280_66796365_66800640_66800697_66801030_66801103_66803994_66804185_66813855_66814016_66816052_66816200_66821642_66821765_66822563_66822675_66828265_66828365_66838366_66838446_66842848_66843070_66843168
transcript_36766.known	chr11	+	1428	8	FSM	ENSG00000173653.8	ENST00000524849.5	1428	8	0	0	0	0	multi-exon	TRUE	canonical	3	107	junction_2	128.153288315683	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGCCTTTGGGAATCGG	66838590	True	NA	16	True	ATTAAA	-25	NA	66843450	66846532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66843641_66843758_66843862_66843959_66844040_66844285_66844365_66844868_66845037_66845165_66845238_66845499_66845563_66845859
transcript_36768.known	chr11	+	1379	7	FSM	ENSG00000173653.8	ENST00000524506.5	1379	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_6	156.285707031136	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTTGGGCCTTTGGGAA	66838576	True	NA	12	True	ATTAAA	-21	NA	66843436	66846528	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66843641_66843758_66843862_66843955_66844040_66844285_66844365_66844868_66845037_66845165_66845238_66845859
transcript_36770.nic	chr11	+	2008	6	ISM	ENSG00000173653.8	ENST00000524506.5	1379	7	-9	2	-9	0	intron_retention	FALSE	canonical	3	339	junction_2	59.957985289701	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGCCTTGGGCCTTTGGG	66838567	True	NA	10	True	ATTAAA	-19	NA	66843427	66846526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_66843641_66843758_66843862_66843955_66844040_66844285_66844365_66844868_66845037_66845165
transcript_36779.known	chr11	+	1270	7	FSM	ENSG00000173653.8	ENST00000525356.1	1270	7	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	133.477838360281	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTTGGGCCTTTGGGAA	66843705	False	NA	12	True	ATTAAA	-21	NA	66843722	66846528	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66843862_66843959_66844040_66844285_66844365_66844868_66845037_66845165_66845238_66845499_66845563_66845859
transcript_36780.known	chr11	-	4305	23	FSM	ENSG00000173599.15	ENST00000393960.7	4305	23	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_22	25.5466272781605	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGGTAGTGAGAATGACCA	-66956392	True	NA	NA	False	NA	NA	NA	66958383	66848419	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66849148_66849229_66849371_66849610_66849860_66849936_66850117_66850219_66850465_66850673_66850924_66851039_66851281_66851789_66851947_66852438_66852661_66852746_66852837_66853238_66853384_66863773_66863957_66866186_66866350_66868845_66868965_66870301_66870454_66870774_66870893_66871051_66871198_66871314_66871481_66871686_66871872_66872023_66872160_66952429_66952469_66954248_66954437_66958321
transcript_36782.known	chr11	-	4248	23	FSM	ENSG00000173599.15	ENST00000529047.6	4248	23	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_21	25.3472169075557	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAGTGAGAATGACCATCG	-66956392	True	NA	NA	False	NA	NA	NA	66958383	66848416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66849148_66849229_66849371_66849610_66849860_66849936_66850117_66850219_66850465_66850673_66850924_66851039_66851281_66851789_66851947_66852438_66852661_66852746_66852837_66853238_66853384_66863773_66863957_66866186_66866350_66868845_66868965_66870301_66870454_66870774_66870893_66871051_66871198_66871314_66871481_66871686_66871872_66872023_66872160_66952429_66952469_66957868_66957997_66958321
transcript_36784.known	chr11	-	3877	22	FSM	ENSG00000173599.15	ENST00000528224.2	3877	22	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	20.0758200020033	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGGGAAGTTTACTCAAT	-66956392	True	NA	-44	True	NA	NA	NA	66958383	66848564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66849148_66849229_66849371_66849610_66849860_66849936_66850117_66850219_66850465_66850673_66850924_66851039_66851281_66851789_66851852_66852438_66852661_66852746_66852837_66853238_66853384_66863773_66863957_66866186_66866350_66868845_66868965_66870301_66870454_66870774_66870893_66871051_66871198_66871314_66871481_66871686_66871872_66872023_66872160_66952429_66952469_66958321
transcript_36786.known	chr11	-	4017	22	FSM	ENSG00000173599.15	ENST00000393958.7	4017	22	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_8	13.3448929482575	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGATCCTGTGCAGCCC	-66956392	True	NA	1	True	AATAAA	-23	NA	66958383	66848519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66849148_66849229_66849371_66849610_66849860_66849936_66850117_66850219_66850465_66850673_66850924_66851039_66851281_66851789_66851947_66852438_66852661_66852746_66852837_66853238_66853384_66863773_66863957_66866186_66866350_66868845_66868965_66870301_66870454_66870774_66870893_66871051_66871198_66871314_66871481_66871686_66871872_66872023_66872160_66952429_66952469_66958321
transcript_36798.known	chr11	-	1702	12	FSM	ENSG00000173599.15	ENST00000524491.6	1702	12	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	22.3621581181799	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGTGGCTGCAGCCCCTG	-66956385	True	NA	-12	True	AATAAA	-14	NA	66958376	66860429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_66860670_66863773_66863957_66866186_66866350_66868845_66868965_66870301_66870454_66870774_66870893_66871051_66871198_66871314_66871481_66871686_66871872_66872023_66872160_66952429_66952469_66958321
transcript_36804.nnic	chr11	+	2829	3	NNC	ENSG00000173621.9	novel	2869	2	NA	NA	-176	0	intron_retention	FALSE	canonical	3	6	junction_1	117.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTAGTCTCTGGTGTTGT	66856869	False	NA	19	True	AATAAA	-19	NA	66856887	66860475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_66857297_66857512_66859094_66859636
transcript_36806.known	chr11	+	2869	2	FSM	ENSG00000173621.9	ENST00000309602.5	2869	2	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTAGTCTCTGGTGTTGT	66856648	True	NA	19	True	AATAAA	-19	NA	66857063	66860475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66859094_66859636
transcript_36807.known	chr11	+	1187	2	FSM	ENSG00000173237.5	ENST00000308963.4	1187	2	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAACGATTTGCCTGGTGA	66975254	False	NA	NA	False	AATAAA	-15	NA	66975276	66977004	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_66975639_66976179
transcript_36808.known	chr11	+	4534	11	FSM	ENSG00000173227.14	ENST00000393946.6	4534	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	7.38647412504776	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGGACTCAGGCCTCCTA	67006454	True	NA	30	True	NA	NA	NA	67006777	67050863	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67007456_67009878_67010123_67010822_67010995_67021868_67021914_67030121_67030179_67034644_67034839_67039810_67040204_67043637_67043854_67044592_67044714_67045743_67045878_67048583
transcript_36809.nnic	chr11	+	4296	10	NIC	ENSG00000173227.14	novel	4534	11	NA	NA	-6	-72	combination_of_known_splicesites	TRUE	canonical	3	12	junction_2	5.13761245408751	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGGCAGGAAGAGGGGG	67006448	True	NA	-42	True	AATAAA	-1	NA	67006771	67050791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_67007456_67009878_67010123_67021868_67021914_67030121_67030179_67034644_67034839_67039810_67040204_67043637_67043854_67044592_67044714_67045743_67045878_67048583
transcript_36811.known	chr11	+	3722	8	FSM	ENSG00000173227.14	ENST00000527043.6	3722	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	4.76380914300945	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGGACTCAGGCCTCCTA	NA	False	NA	30	True	NA	NA	NA	67023133	67050863	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67023461_67030121_67030179_67034644_67034839_67039810_67040204_67043637_67043854_67044592_67044714_67045743_67045878_67048583
transcript_36816.known	chr11	+	1104	5	FSM	ENSG00000173156.7	ENST00000308831.7	1104	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_4	12.9034879005639	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTGTGTCGTGCCTCTTT	67055423	True	NA	8	True	AAGAAA	-15	NA	67056846	67072017	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67057035_67065895_67065984_67066737_67066848_67070424_67070560_67071434
transcript_36818.known	chr11	+	3651	10	FSM	ENSG00000173120.15	ENST00000530342.2	3651	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	24.0924146661235	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCGGAATTTCTTTTGGG	67237903	True	NA	34	True	AAAAAG	-11	NA	67240046	67256373	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67240370_67243008_67243093_67245188_67245459_67245984_67246117_67248280_67248371_67250085_67250799_67252693_67252858_67253452_67253612_67254202_67254419_67254873
transcript_36826.known	chr11	+	463	3	FSM	ENSG00000173120.15	ENST00000517637.2	463	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	11	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAGAAGAAGAAG	67238157	False	NA	NA	False	NA	NA	NA	67240300	67243816	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67240370_67243008_67243093_67243506
transcript_36831.known	chr11	+	2219	16	FSM	ENSG00000172932.16	ENST00000308440.11	2219	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	26.0652173510131	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCTGCTCTGCTCACTGG	67288479	True	NA	6	True	AATAAA	-15	NA	67289347	67302483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67289551_67289828_67289966_67290077_67290214_67290321_67290447_67291475_67291522_67291602_67291747_67291990_67292181_67299057_67299125_67299529_67299612_67299826_67299889_67299992_67300124_67300989_67301148_67301281_67301399_67301487_67301652_67301731_67301824_67302118
transcript_36834.known	chr11	+	2128	15	FSM	ENSG00000172932.16	ENST00000511455.7	2128	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	23.1553097009506	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGCTCTGCTCACTGGG	67288434	True	NA	7	True	AATAAA	-16	NA	67289302	67302484	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67289551_67290077_67290214_67290321_67290447_67291475_67291522_67291602_67291747_67291990_67292181_67299057_67299125_67299529_67299612_67299826_67299889_67299992_67300124_67300989_67301148_67301281_67301399_67301487_67301652_67301731_67301824_67302118
transcript_36843.nic	chr11	+	2500	14	NIC	ENSG00000172932.16	novel	2128	15	NA	NA	-12	0	intron_retention	FALSE	canonical	3	27	junction_1	16.1608043621948	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGCTCTGCTCACTGGG	67288467	True	NA	7	True	AATAAA	-16	NA	67289335	67302484	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_67289551_67290077_67290214_67290321_67290447_67291475_67291522_67291602_67291747_67291990_67292181_67299057_67299612_67299826_67299889_67299992_67300124_67300989_67301148_67301281_67301399_67301487_67301652_67301731_67301824_67302118
transcript_36845.nnic	chr11	+	2084	14	NIC	ENSG00000172932.16	novel	2128	15	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_6	19.5650939023631	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGCTCTGCTCACTGGG	67288411	True	NA	7	True	AATAAA	-16	NA	67289279	67302484	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_67289551_67290077_67290214_67290321_67290447_67291475_67291522_67291602_67291747_67291990_67292181_67299529_67299612_67299826_67299889_67299992_67300124_67300989_67301148_67301281_67301399_67301487_67301652_67301731_67301824_67302118
transcript_36848.known	chr11	+	2138	14	FSM	ENSG00000172932.16	ENST00000447274.7	2138	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	23.7887646893189	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGCTCTGCTCACTGGGC	67288533	True	NA	8	True	AATAAA	-17	NA	67289401	67302485	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67289551_67290077_67290447_67291475_67291522_67291602_67291747_67291990_67292181_67299057_67299125_67299529_67299612_67299826_67299889_67299992_67300124_67300989_67301148_67301281_67301399_67301487_67301652_67301731_67301824_67302118
transcript_36862.nic	chr11	+	1304	6	ISM	ENSG00000172932.16	ENST00000511455.7	2128	15	45	9844	0	466	5prime_fragment	FALSE	canonical	3	27	junction_1	13.7840487520902	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTATTGAGATATAATCT	67288479	True	NA	NA	False	AAAACA	-6	NA	67289347	67292640	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_67289551_67290077_67290214_67290321_67290447_67291475_67291522_67291602_67291747_67291990
transcript_36866.nic	chr11	+	1316	4	ISM	ENSG00000172932.16	ENST00000512101.5	1491	5	-20	276	-20	-276	5prime_fragment	FALSE	canonical	3	12	junction_3	15.6276108929747	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGATGAAGGGCTGGGC	67288411	True	NA	NA	False	NA	NA	NA	67289279	67291375	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_67289551_67290077_67290214_67290321_67290447_67290591
transcript_36869.known	chr11	+	558	3	FSM	ENSG00000172932.16	ENST00000513460.5	558	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	11.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTGTGCCTCCTGCCAC	67288479	True	NA	NA	False	NA	NA	NA	67289347	67290540	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67289551_67290077_67290214_67290321
transcript_36875.known	chr11	+	2781	14	FSM	ENSG00000172830.13	ENST00000308127.9	2781	14	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_7	13.3292400028379	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTATTTTCAATGTGA	67300974	True	NA	9	True	AATAAA	-14	NA	67303529	67312592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67303692_67304117_67304156_67304772_67305008_67306837_67306963_67307041_67307114_67307370_67307437_67307548_67307738_67307845_67307940_67308173_67308303_67308411_67308459_67309396_67309544_67309767_67309969_67310065_67310340_67311590
transcript_36876.known	chr11	+	2587	14	FSM	ENSG00000172830.13	ENST00000532881.5	2587	14	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_12	24.8869633894045	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTATTTTCAATGTGA	67301070	False	NA	9	True	AATAAA	-14	NA	67303625	67312592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67303692_67304117_67304156_67304772_67305008_67306837_67306963_67307041_67307114_67307370_67307437_67307548_67307738_67307845_67307940_67308173_67308303_67308411_67308459_67309396_67309544_67309767_67309969_67310163_67310340_67311590
transcript_36877.nic	chr11	+	2932	14	NIC	ENSG00000172830.13	novel	2781	14	NA	NA	-30	0	intron_retention	FALSE	canonical	3	16	junction_1	26.9972604351982	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTATTTTCAATGTGA	67300892	True	NA	9	True	AATAAA	-14	NA	67303447	67312592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_67303692_67304048_67304156_67304772_67305008_67306837_67306963_67307041_67307114_67307370_67307437_67307548_67307738_67307845_67307940_67308173_67308303_67308411_67308459_67309396_67309544_67309767_67309969_67310065_67310340_67311590
transcript_36882.nic	chr11	+	2712	13	NIC	ENSG00000172830.13	novel	2781	14	NA	NA	-68	0	intron_retention	TRUE	canonical	3	19	junction_6	26.3390025543025	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTATTTTCAATGTGA	67300854	True	NA	9	True	AATAAA	-14	NA	67303409	67312592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_67303692_67304117_67304156_67304772_67305008_67306837_67306963_67307041_67307114_67307370_67307437_67307845_67307940_67308173_67308303_67308411_67308459_67309396_67309544_67309767_67309969_67310065_67310340_67311590
transcript_36889.known	chr11	+	2990	13	FSM	ENSG00000172830.13	ENST00000376757.9	2990	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	37.0212964236652	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTGACGATGAAGCCATC	67300922	True	NA	22	True	AATAAA	-27	NA	67303477	67312605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67303692_67304048_67304156_67304776_67305008_67306837_67307114_67307370_67307437_67307548_67307738_67307845_67307940_67308173_67308303_67308411_67308459_67309396_67309544_67309767_67309969_67310065_67310340_67311590
transcript_369.known	chr1	-	842	11	FSM	ENSG00000131591.18	ENST00000434641.5	842	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	20.4560504496836	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCCGTATCAGCAATGTC	-1115104	True	NA	NA	False	NA	NA	NA	1116095	1082915	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1082988_1083914_1084012_1084352_1084384_1084480_1084507_1085877_1086013_1087138_1087205_1087501_1087598_1090352_1090429_1091471_1091566_1091990_1092104_1116059
transcript_36913.known	chr11	-	1465	7	FSM	ENSG00000172531.16	ENST00000532446.5	1465	7	0	0	0	0	multi-exon	FALSE	canonical	2	104	junction_6	1139.56386637852	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCAAAGCTGGATTCTCGC	-67401556	False	36701	-30	True	AATAAA	-1	NA	67401577	67398200	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67398646_67398721_67398857_67398939_67399164_67399560_67399666_67400688_67400920_67401067_67401200_67401384
transcript_36914.known	chr11	-	1421	7	FSM	ENSG00000172531.16	ENST00000376745.9	1421	7	0	0	0	0	multi-exon	FALSE	canonical	3	2713	junction_2	217.51430348881	3671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGGCCTCCGTCTCACA	-67365157	True	NA	-12	True	AATAAA	-19	NA	67401858	67398182	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67398646_67398721_67398857_67398939_67399164_67399560_67399666_67400688_67400920_67401067_67401200_67401727
transcript_36915.known	chr11	-	1389	7	FSM	ENSG00000172531.16	ENST00000312989.11	1389	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_6	1164.46832169116	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGGCCTCCGTCTCACA	-67365092	True	NA	-12	True	AATAAA	-19	NA	67401793	67398182	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67398646_67398721_67398857_67398939_67399164_67399560_67399666_67400688_67400920_67401067_67401233_67401727
transcript_36918.known	chr11	-	1054	6	FSM	ENSG00000172531.16	ENST00000358239.8	1054	6	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_5	1208.34895622084	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAACATGGAGCCTTGGTG	-67365170	True	NA	-32	True	NA	NA	NA	67401871	67398430	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67398646_67398721_67398857_67398939_67399164_67399560_67399666_67400688_67400920_67401727
transcript_36919.known	chr11	-	1809	6	FSM	ENSG00000172531.16	ENST00000677343.1	1809	6	0	0	0	0	multi-exon	FALSE	canonical	3	2713	junction_2	232.120141306178	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGGATTCTCGCCATG	-67365162	True	NA	-26	True	AATAAA	-5	NA	67401863	67398196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67398646_67398721_67398857_67398939_67399666_67400688_67400920_67401067_67401200_67401727
transcript_36921.known	chr11	-	1483	6	FSM	ENSG00000172531.16	ENST00000526510.6	1483	6	0	0	0	0	multi-exon	FALSE	canonical	3	3014	junction_4	124.927178788284	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATAAAGGTCAAAGCTGG	-67365162	True	NA	-38	True	NA	NA	NA	67401863	67398208	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67398646_67398721_67399164_67399560_67399666_67400688_67400920_67401067_67401200_67401727
transcript_36926.known	chr11	-	899	4	FSM	ENSG00000175482.9	ENST00000530584.5	899	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	107.251521615728	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACCTTCAGTCCTTTA	-67349128	True	NA	-5	True	AATAAA	-18	NA	67353518	67351547	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67352020_67352690_67352803_67352987_67353078_67353293
transcript_36927.known	chr11	-	584	4	FSM	ENSG00000175482.9	ENST00000531239.2	584	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	92.6390846241477	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCCTGCGCAGCTGAAGC	-67349144	True	NA	NA	False	NA	NA	NA	67353534	67351808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67352020_67352690_67352803_67352987_67353078_67353363
transcript_36928.known	chr11	-	1486	4	FSM	ENSG00000175482.9	ENST00000529704.5	1486	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	96.4100040913228	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGGCTGGGCGCAGTGG	-67349189	True	NA	NA	False	AATAAA	-11	NA	67353579	67350776	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67352020_67352690_67352803_67352987_67353078_67353538
transcript_36934.known	chr11	+	2086	11	FSM	ENSG00000172613.8	ENST00000307980.7	2086	11	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_10	11.2338773359869	165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAAGGCTCCATGTTCCC	67390211	True	NA	NA	False	ATTAAA	-18	NA	67391985	67398410	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67392079_67392160_67392232_67392653_67392783_67393495_67393611_67393690_67393791_67395715_67395826_67395911_67396022_67396110_67396176_67396262_67396401_67397178_67397387_67397463
transcript_36935.known	chr11	-	1677	6	FSM	ENSG00000172531.16	ENST00000679175.1	1677	6	0	0	0	0	multi-exon	FALSE	canonical	3	2713	junction_2	233.504946414418	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCAAAGCTGGATTCTCGC	-67401583	False	36701	-30	True	AATAAA	-1	NA	67401604	67398200	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67398646_67398721_67398857_67398939_67399164_67399560_67399666_67400688_67400920_67401067
transcript_36936.known	chr11	-	2430	6	FSM	ENSG00000172531.16	ENST00000532279.2	2430	6	0	0	0	0	multi-exon	FALSE	canonical	3	2713	junction_2	196.251878971897	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCAAAGCTGGATTCTCG	-67365162	True	NA	-31	True	NA	NA	NA	67401863	67398201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67398646_67398721_67398857_67398939_67399164_67399560_67400920_67401067_67401200_67401727
transcript_36938.known	chr11	+	1806	16	FSM	ENSG00000175634.15	ENST00000528964.5	1806	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	164.869591563218	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCGCCACGCCCCGCGCT	67422122	True	NA	-34	True	NA	NA	NA	67428503	67435344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67428624_67428981_67429023_67429119_67429241_67429526_67429596_67431367_67431516_67432352_67432493_67432599_67432658_67432736_67432838_67432951_67433043_67433125_67433217_67433339_67433448_67433994_67434058_67434197_67434276_67434376_67434485_67434581_67434695_67434988
transcript_36939.nic	chr11	+	1908	16	NIC	ENSG00000175634.15	novel	1806	16	NA	NA	-4	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_10	164.214845722168	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGACCTGGCTCTTTGT	67422074	True	NA	23	True	ATTAAA	-14	NA	67428455	67435401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_67428624_67428981_67429023_67429119_67429241_67429526_67429596_67431367_67431516_67432355_67432493_67432599_67432658_67432736_67432838_67432951_67433043_67433125_67433217_67433339_67433448_67433994_67434058_67434197_67434276_67434376_67434485_67434581_67434695_67434988
transcript_36948.known	chr11	+	1733	15	FSM	ENSG00000175634.15	ENST00000312629.10	1733	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	110.976739611028	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGACCTGGCTCTTTGT	67422112	True	NA	23	True	ATTAAA	-14	NA	67428493	67435401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67428624_67428981_67429023_67429119_67429241_67429526_67429596_67431367_67431516_67432599_67432658_67432736_67432838_67432951_67433043_67433125_67433217_67433339_67433448_67433994_67434058_67434197_67434276_67434376_67434485_67434581_67434695_67434988
transcript_36990.known	chr11	-	1954	12	FSM	ENSG00000172725.14	ENST00000537042.5	1954	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	192.774693994383	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCATTCCAAATAAAATTC	-67435415	True	NA	-3	True	NA	NA	NA	67443456	67438081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67438502_67438670_67438950_67439785_67439844_67440117_67440264_67440334_67440440_67440701_67440837_67441124_67441245_67441332_67441515_67441732_67441863_67441965_67442089_67442427_67442631_67443403
transcript_36991.known	chr11	-	1931	12	FSM	ENSG00000172725.14	ENST00000393893.5	1931	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_11	144.944731558658	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGACCTGCTGCTGCAA	NA	False	NA	-2	True	AATAAA	-19	NA	67443821	67438047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67438502_67438670_67438950_67439785_67439844_67440117_67440264_67440334_67440440_67441124_67441245_67441332_67441515_67441732_67441863_67441965_67442089_67442427_67442631_67443403_67443466_67443752
transcript_36994.known	chr11	-	4411	11	FSM	ENSG00000172725.14	ENST00000341356.10	4411	11	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_5	26.2800304413827	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGTGGTCCTACAGAGA	-67435435	True	NA	-2	True	AATAAA	-17	NA	67443476	67435509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67438502_67438670_67438950_67439785_67439844_67440117_67440264_67440334_67440440_67441124_67441245_67441332_67441515_67441732_67441863_67441965_67442089_67442427_67442631_67443403
transcript_36996.known	chr11	-	4464	11	FSM	ENSG00000172725.14	ENST00000616321.4	4464	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	154.63841696034	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGTGGTCCTACAGAGA	-67435443	True	NA	-2	True	AATAAA	-17	NA	67443484	67435509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67438502_67438670_67438950_67439785_67439844_67440117_67440264_67440334_67440485_67441124_67441245_67441332_67441515_67441732_67441863_67441965_67442089_67442427_67442631_67443403
transcript_37.known	ERCC-00095	+	513	1	FSM	ERCC-00095A	DQ516759	513	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00095_+_0_500
transcript_370.known	chr1	-	2010	11	FSM	ENSG00000131591.18	ENST00000379325.7	2010	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	19.3465759244369	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGTTCCGAGCTGCTCT	-1115104	True	NA	-11	True	TATAAA	-16	NA	1116095	1081822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1082988_1083914_1084087_1084352_1084384_1084480_1084507_1085877_1086013_1087138_1087205_1087501_1087598_1090352_1090429_1091471_1091566_1091990_1092104_1116059
transcript_37017.nic	chr11	-	915	7	NIC	ENSG00000172663.9	novel	3551	7	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	156	junction_5	197.189981715322	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAATTGCTCTCCTCCTGT	-67464553	True	NA	-8	True	AATAAA	-22	NA	67469285	67464352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_67464697_67464802_67464857_67465055_67465101_67467311_67467389_67467500_67467564_67468027_67468093_67469018
transcript_37018.known	chr11	-	3551	7	FSM	ENSG00000172663.9	ENST00000308022.7	3551	7	0	0	0	0	multi-exon	FALSE	canonical	3	531	junction_5	68.9091592041451	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTGTTGACTTGACTT	-67464519	True	NA	NA	False	AATAAA	-44	NA	67469251	67461709	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67464697_67464802_67464857_67465055_67465101_67467311_67467389_67467500_67467591_67468027_67468093_67469018
transcript_37021.known	chr11	-	1063	7	FSM	ENSG00000172663.9	ENST00000545682.5	1063	7	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	230.140114326517	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAATTGCTCTCCTCCTGT	-67464507	True	NA	-8	True	AATAAA	-22	NA	67469239	67464352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67464697_67464802_67464857_67465055_67465268_67467311_67467389_67467500_67467591_67468027_67468093_67469018
transcript_37025.nic	chr11	-	902	7	NIC	ENSG00000172663.9	novel	3551	7	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_1	233.473767263048	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGGCAATTGCTCTCCT	-67464553	True	NA	-13	True	AATAAA	-17	NA	67469285	67464357	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_67464662_67464802_67464857_67465055_67465101_67467311_67467389_67467500_67467591_67468027_67468093_67469018
transcript_37027.known	chr11	+	1182	6	FSM	ENSG00000110711.11	ENST00000684006.1	1182	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	93.743053075948	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGAGTCTGCTGAGCTGC	67480740	True	NA	14	True	TATAAA	-18	NA	67483067	67491102	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67483258_67487005_67487186_67489266_67489456_67490037_67490215_67490315_67490458_67490798
transcript_37031.nic	chr11	-	3153	6	NIC	ENSG00000172663.9	novel	1063	7	NA	NA	-13	0	intron_retention	FALSE	canonical	3	531	junction_4	75.2239323619817	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAATTGCTCTCCTCCTGT	-67464553	True	NA	-8	True	AATAAA	-22	NA	67469285	67464352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_67464697_67464802_67464857_67465055_67467389_67467500_67467591_67468027_67468093_67469018
transcript_37032.known	chr11	-	680	6	FSM	ENSG00000172663.9	ENST00000536020.5	680	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	301.540975656709	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCCTCCAGGACCCTCG	-67464536	True	NA	NA	False	NA	NA	NA	67469268	67464536	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67464697_67464802_67464857_67467311_67467389_67467500_67467564_67468016_67468093_67469018
transcript_37033.known	chr11	-	823	6	FSM	ENSG00000172663.9	ENST00000393877.3	823	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	242.461213392988	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTTGTGCTAATAAAAG	-67464518	True	NA	-47	True	NA	NA	NA	67469250	67464391	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67464697_67464802_67464857_67467311_67467389_67467500_67467591_67468027_67468093_67469018
transcript_37037.nic	chr11	-	1043	6	NIC	ENSG00000172663.9	novel	3551	7	NA	NA	-13	0	intron_retention	FALSE	canonical	3	531	junction_4	71.9149497670686	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGGCAATTGCTCTCCT	-67464553	True	NA	-13	True	AATAAA	-17	NA	67469285	67464357	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_67464857_67465055_67465101_67467311_67467389_67467500_67467591_67468027_67468093_67469018
transcript_37039.known	chr11	+	1304	5	FSM	ENSG00000110711.11	ENST00000525341.2	1304	5	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_3	5.78791845139511	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTTGGCCCTGCCTTAC	67480854	False	NA	-91	True	NA	NA	NA	67483181	67490997	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67483258_67487005_67487186_67489266_67489456_67490037_67490215_67490315
transcript_37041.known	chr11	+	1030	5	FSM	ENSG00000110711.11	ENST00000528641.7	1030	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	95.1981486164516	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGAGTCTGCTGAGCTG	67480713	True	NA	13	True	TATAAA	-17	NA	67483040	67491101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67483258_67487005_67487186_67490037_67490215_67490315_67490458_67490787
transcript_37047.nic	chr11	-	3254	5	NIC	ENSG00000172663.9	novel	1063	7	NA	NA	-13	0	intron_retention	FALSE	canonical	3	531	junction_3	79.4398357249057	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGGCAATTGCTCTCCT	-67464553	True	NA	-13	True	AATAAA	-17	NA	67469285	67464357	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_67464857_67465055_67467389_67467500_67467591_67468027_67468093_67469018
transcript_37049.known	chr11	-	473	4	FSM	ENSG00000172663.9	ENST00000452789.6	473	4	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_2	250.792521596815	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTGGGGTCAAGAGGGGC	-67464540	True	NA	NA	False	GGGGCT	-17	NA	67469272	67467297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67467389_67467500_67467564_67468027_67468093_67469018
transcript_3705.nnic	chr1	+	1003	9	NNC	ENSG00000053372.5	novel	2049	8	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	170.393478455016	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGGCCCTCTTTTTTCTG	19251744	False	NA	23	True	AGTAAA	-17	NA	19251786	19260128	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_19251864_19254781_19254841_19255947_19256052_19257063_19257146_19257453_19257522_19257832_19257985_19258476_19258554_19258680_19258978_19260041
transcript_37050.known	chr11	-	1866	4	FSM	ENSG00000172663.9	ENST00000501408.6	1866	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	303.58890332524	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGACAAGGTCTCACTAT	-67464504	True	NA	NA	False	TTTAAA	-8	NA	67469236	67465906	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67467389_67467500_67467591_67468016_67468093_67469018
transcript_37055.nnic	chr11	-	4390	25	NNC	ENSG00000110697.13	novel	4217	24	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_22	58.6030520394061	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACTCACCCCATGCCTGG	-67504146	False	5894	-12	True	AATAAA	-17	NA	67505396	67491767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_67492297_67492933_67493063_67493409_67493594_67493687_67493838_67493921_67494071_67494243_67494361_67494845_67494957_67495076_67495226_67495437_67495603_67496177_67496349_67497230_67497437_67497521_67497680_67497916_67498025_67498132_67498323_67498595_67498847_67498939_67499002_67499722_67499831_67499913_67500010_67500094_67500422_67501861_67502087_67502291_67502414_67502503_67502719_67503736_67503877_67504102_67504222_67505187
transcript_37056.nnic	chr11	-	4209	24	NNC	ENSG00000110697.13	novel	4217	24	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	43.4116881632947	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACTCACCCCATGCCTGG	-67504146	False	5894	-12	True	AATAAA	-17	NA	67505396	67491767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_67492297_67492933_67493063_67493409_67493553_67493687_67493838_67493921_67494071_67494243_67494361_67494845_67494957_67495076_67495226_67495437_67495603_67496177_67496349_67497230_67497437_67497521_67497680_67497916_67498025_67498132_67498323_67498595_67498847_67498939_67499002_67499722_67499831_67499913_67500010_67500094_67500422_67501861_67502087_67502291_67502414_67502503_67502719_67504102_67504222_67505187
transcript_37064.known	chr11	-	4216	24	FSM	ENSG00000110697.13	ENST00000436757.6	4216	24	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_10	35.344536987999	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACTCACCCCATGCCTGG	-67504115	False	5894	-12	True	AATAAA	-17	NA	67505365	67491767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67492297_67492933_67493063_67493409_67493594_67493687_67493838_67493921_67494071_67494243_67494361_67494845_67494957_67495076_67495226_67495437_67495603_67496177_67496346_67497230_67497437_67497521_67497680_67497916_67498025_67498132_67498323_67498595_67498847_67498939_67499002_67499722_67499831_67499913_67500010_67500094_67500422_67501861_67502087_67502291_67502414_67502503_67502719_67504102_67504222_67505187
transcript_37096.known	chr11	-	923	4	FSM	ENSG00000167797.8	ENST00000531178.1	923	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	356.133245975279	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCACAGGCCTGGCACCT	-67502264	True	NA	-57	True	NA	NA	NA	67508158	67506619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67507013_67507364_67507498_67507591_67507690_67507859
transcript_37097.known	chr11	-	909	4	FSM	ENSG00000167797.8	ENST00000301488.8	909	4	0	0	0	0	multi-exon	FALSE	canonical	3	750	junction_3	37.0255167268316	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGAGCCTTTCTGGGTC	-67502268	True	NA	-13	True	AATAAA	-25	NA	67508162	67506496	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67507013_67507364_67507498_67507591_67507690_67508000
transcript_37098.known	chr11	-	634	3	FSM	ENSG00000167797.8	ENST00000531506.1	634	3	0	0	0	0	multi-exon	FALSE	canonical	3	750	junction_2	12.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCTGTGGAGGGTTGCTG	-67502197	True	NA	NA	False	NA	NA	NA	67508091	67507052	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67507498_67507591_67507690_67508000
transcript_3710.known	chr1	+	2049	8	FSM	ENSG00000053372.5	ENST00000330263.5	2049	8	0	0	0	0	multi-exon	FALSE	canonical	3	451	junction_1	30.9825494003792	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGGCCCTCTTTTTTCTG	19246091	True	NA	23	True	AGTAAA	-17	NA	19251804	19260128	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_19251864_19254781_19254841_19255947_19256052_19257063_19257146_19257453_19257522_19257832_19257985_19258476_19258554_19258680
transcript_37105.known	chr11	+	741	7	FSM	ENSG00000084207.18	ENST00000398606.10	741	7	0	0	0	0	multi-exon	FALSE	canonical	3	6807	junction_1	2259.32015339915	13551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGAGCACTGTGTTTCCT	67390038	True	NA	43	True	AATAAA	-17	NA	67583811	67586653	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67583845_67584133_67584170_67584463_67584571_67584684_67584773_67585137_67585242_67586103_67586212_67586388
transcript_37111.known	chr11	+	706	6	FSM	ENSG00000084207.18	ENST00000398603.6	706	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	5142.2341992562	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCACTGTGTTTCCTGGG	67389968	True	NA	46	True	AATAAA	-20	NA	67583741	67586656	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67583845_67584133_67584170_67584463_67584571_67584684_67584773_67585137_67585242_67586388
transcript_37114.known	chr11	+	471	6	FSM	ENSG00000084207.18	ENST00000646888.1	471	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	5100.48763943214	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGCTCAAGGCCTTCCT	67390053	True	NA	NA	False	NA	NA	NA	67583826	67586505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67583845_67584133_67584170_67584684_67584773_67585137_67585242_67586103_67586212_67586388
transcript_37134.known	chr11	+	723	5	FSM	ENSG00000084207.18	ENST00000498765.5	723	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	5532.13229121466	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTTTGCCTTCCTTTCTC	67584453	False	NA	-6	True	NA	NA	NA	67584463	67586604	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67584571_67584684_67584773_67585037_67585242_67586103_67586212_67586388
transcript_37139.known	chr11	+	1560	10	FSM	ENSG00000167792.13	ENST00000322776.11	1560	10	0	0	0	0	multi-exon	TRUE	canonical	3	888	junction_1	84.5683301782399	1723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTTTACCCTTTACCCA	67595041	True	NA	45	True	AATAAA	-41	NA	67606935	67612554	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67607077_67608395_67608479_67608551_67608723_67609451_67609636_67610380_67610571_67610994_67611208_67611402_67611570_67611896_67611979_67612119_67612266_67612371
transcript_37142.known	chr11	+	1503	10	FSM	ENSG00000167792.13	ENST00000529927.5	1503	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	324.633050202764	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCCAGCTGCCGCTGCTG	67595045	True	NA	19	True	AATAAA	-15	NA	67606939	67612528	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67607050_67608395_67608479_67608551_67608723_67609451_67609636_67610380_67610571_67610994_67611208_67611402_67611570_67611896_67611979_67612119_67612266_67612371
transcript_37143.known	chr11	+	1512	10	FSM	ENSG00000167792.13	ENST00000415352.6	1512	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	330.148040119977	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCGCTGCTGTGACTGT	67595049	True	NA	26	True	AATAAA	-22	NA	67606943	67612535	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67607056_67608395_67608479_67608551_67608723_67609451_67609636_67610380_67610571_67610994_67611208_67611402_67611570_67611896_67611979_67612119_67612266_67612371
transcript_37170.known	chr11	+	1200	4	FSM	ENSG00000167792.13	ENST00000524838.5	1200	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	441.524882902677	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCATTAGGAGCTTCACCG	67595049	True	NA	NA	False	NA	NA	NA	67606943	67610268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67607077_67608399_67608479_67608551_67608723_67609451
transcript_37171.known	chr11	+	626	3	FSM	ENSG00000167792.13	ENST00000534139.5	626	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	464	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGTAGGGAGAGATGTAG	67595063	True	NA	NA	False	NA	NA	NA	67606957	67609635	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_67607077_67608399_67608723_67609451
transcript_37187.nnic	chr11	-	3777	5	NNC	ENSG00000231793.6	novel	775	8	NA	NA	-4616	-2	intron_retention	FALSE	canonical	3	31	junction_2	1.29903810567666	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATGAGACCCTGTCCTT	-67620839	False	530	-4	True	AATAAA	-14	NA	67620873	67612654	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_67615398_67615614_67615687_67615762_67615843_67616010_67616379_67620359
transcript_37188.known	chr11	-	2548	1	FSM	ENSG00000231793.6	ENST00000639052.1	2548	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGACCCTGTCCTTTCTC	-67614730	False	NA	0	True	AATAAA	-18	NA	67615198	67612650	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67612600_67615200
transcript_37189.known	chr11	-	745	4	FSM	ENSG00000167799.10	ENST00000376693.3	745	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	8.80656320908194	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTCTTGCTTCTGCTGTA	-67629407	True	NA	-1	True	AATAAA	-18	NA	67629937	67627937	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67628252_67628322_67628401_67628918_67629052_67629717
transcript_37190.known	chr11	-	809	3	FSM	ENSG00000167799.10	ENST00000301490.8	809	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	8.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTCTTGCTTCTGCTGTA	-67629400	True	NA	-1	True	AATAAA	-18	NA	67629930	67627937	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67628401_67628918_67629052_67629717
transcript_37192.known	chr11	-	287	1	FSM	ENSG00000239559.2	ENST00000472498.2	287	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTTAAGAATGTCAACAAT	-67682323	False	NA	NA	False	NA	NA	NA	67683058	67682771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67682800_67683100
transcript_37193.known	chr11	-	699	3	FSM	ENSG00000184795.9	ENST00000530315.1	699	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGGGCCGCCTGGTCCCC	NA	False	NA	NA	False	NA	NA	NA	67716005	67711701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67712008_67713818_67713938_67715731
transcript_37200.nic	chr11	-	1977	5	NIC	ENSG00000160172.10	novel	1004	8	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_2	21.3585462988472	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCACACCCCTTAATCG	-67805264	True	NA	NA	False	AATAAA	-14	NA	67805369	67791783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_67793294_67796683_67796834_67799373_67799476_67803001_67803065_67805217
transcript_37201.known	chr11	-	1857	4	FSM	ENSG00000160172.10	ENST00000529253.5	1857	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	17.3781471969828	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGAAGATGATCTGTGGCTA	-67805229	True	NA	NA	False	AATAAA	-31	NA	67805334	67791766	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67793294_67796683_67796834_67803001_67803065_67805217
transcript_37205.known	chr11	-	1814	3	FSM	ENSG00000160172.10	ENST00000531806.5	1814	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	12.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTTGGCAAGAATGATG	-67805217	True	NA	NA	False	NA	NA	NA	67805322	67791647	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67793294_67803001_67803065_67805217
transcript_37209.known	chr11	-	776	4	FSM	ENSG00000254610.3	ENST00000527543.2	776	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAATACAGTAAAAGAGAA	-67955645	True	NA	NA	False	NA	NA	NA	67955802	67934562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67934709_67936774_67936992_67939682_67939775_67955481
transcript_37212.known	chr11	-	2294	11	FSM	ENSG00000110057.8	ENST00000227471.7	2294	11	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_7	36.1586780731818	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGAGTCCCAGGCCGCG	-68002219	True	NA	0	True	AATAAA	-21	NA	68004097	67991099	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_67991858_67993675_67993795_67995610_67995885_67996601_67996785_67997674_67997800_67998358_67998453_67999172_67999306_67999518_67999681_68003021_68003176_68003656_68003799_68003947
transcript_37217.nic	chr11	-	2624	10	NIC	ENSG00000110057.8	novel	2294	11	NA	NA	-107	0	intron_retention	FALSE	canonical	3	167	junction_5	35.8921567139709	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGAGTCCCAGGCCGCG	-68004185	False	NA	0	True	AATAAA	-21	NA	68004214	67991099	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_67991858_67993675_67993795_67995610_67995885_67996601_67996785_67997674_67997800_67998358_67998453_67999172_67999681_68003021_68003176_68003656_68003799_68003947
transcript_37226.known	chr11	+	2811	10	FSM	ENSG00000006534.17	ENST00000342456.11	2811	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTACATCTCAGTGATTT	68010312	True	NA	3	True	AATAAA	-18	NA	68010326	68029276	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_68010393_68015296_68015460_68018526_68018638_68018772_68018894_68019169_68019256_68019714_68019797_68021484_68021872_68022594_68022762_68026008_68026109_68027748
transcript_37230.known	chr11	+	737	7	FSM	ENSG00000110717.13	ENST00000313468.10	737	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1066.02857216243	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCTCTTGTCTTGACTCT	68008084	True	NA	15	True	AATAAA	-16	NA	68030680	68036644	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_68030734_68032151_68032210_68032285_68032337_68032922_68033013_68033110_68033284_68036252_68036382_68036461
transcript_37231.known	chr11	+	814	7	FSM	ENSG00000110717.13	ENST00000526446.5	814	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1222.40591548889	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTGGGAGGCCGAGATC	68008087	True	NA	-92	True	NA	NA	NA	68030683	68036537	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_68030734_68032151_68032210_68032285_68032524_68032922_68033013_68033110_68033284_68036252_68036382_68036461
transcript_37233.known	chr11	+	689	7	FSM	ENSG00000110717.13	ENST00000526339.5	689	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1316.16455615888	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAAGTTGCTCAACAACG	68008146	True	NA	NA	False	NA	NA	NA	68030742	68036514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_68030878_68032151_68032210_68032285_68032337_68032922_68033013_68033110_68033284_68036252_68036382_68036461
transcript_37235.nic	chr11	+	923	7	NIC	ENSG00000110717.13	novel	737	7	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	1314.3322026371	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCTCTTGTCTTGACTCT	68008126	True	NA	15	True	AATAAA	-16	NA	68030722	68036644	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_68030962_68032151_68032210_68032285_68032337_68032922_68033013_68033110_68033284_68036252_68036382_68036461
transcript_37243.known	chr11	+	936	5	FSM	ENSG00000110717.13	ENST00000432321.6	936	5	0	0	0	0	multi-exon	FALSE	canonical	3	1598	junction_1	551.292742107131	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGCCAGCACGGGAACAAT	68008020	True	NA	NA	False	NA	NA	NA	68030616	68033730	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_68030734_68032151_68032210_68032285_68032337_68032922_68033013_68033110
transcript_37246.nnic	chr11	+	680	5	NIC	ENSG00000110717.13	novel	737	7	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	1383.09080956386	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCTCTTGTCTTGACTCT	68008032	True	NA	15	True	AATAAA	-16	NA	68030628	68036644	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_68030734_68032922_68033013_68033110_68033284_68036252_68036382_68036461
transcript_37250.known	chr11	+	3072	3	FSM	ENSG00000110717.13	ENST00000532399.1	3072	3	0	0	0	0	multi-exon	FALSE	canonical	3	1598	junction_1	514.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAACAAAAAATACAAAAAAT	68008116	True	NA	NA	False	NA	NA	NA	68030712	68035278	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_68030734_68032151_68032210_68032285
transcript_37253.known	chr11	+	353	3	FSM	ENSG00000110717.13	ENST00000528492.1	353	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	100	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCACGGCCTCTTGTCTTG	68008091	True	NA	10	True	AATAAA	-11	NA	68030687	68036639	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_68030734_68036252_68036382_68036461
transcript_37258.nic	chr11	+	2873	21	NIC	ENSG00000110719.10	novel	2668	20	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	35.1196170252467	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTCTCGTCTCTCTTC	68037414	True	NA	7	True	AATAAA	-18	NA	68038990	68050895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_68039120_68039791_68039963_68041267_68041389_68041752_68041832_68042642_68042864_68042945_68043032_68043370_68043498_68043570_68043654_68043813_68043908_68044131_68044345_68044957_68045103_68047432_68047573_68047646_68047805_68047881_68047973_68048878_68048998_68049080_68049295_68049662_68049789_68049961_68050067_68050136_68050255_68050486_68050665_68050740
transcript_37263.known	chr11	+	2668	20	FSM	ENSG00000110719.10	ENST00000265686.8	2668	20	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	19.3155743570411	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTCTCGTCTCTCTTC	68037448	True	NA	7	True	AATAAA	-18	NA	68039024	68050895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_68039120_68041267_68041389_68041752_68041832_68042642_68042864_68042945_68043032_68043370_68043498_68043570_68043654_68043813_68043908_68044131_68044345_68044957_68045103_68047432_68047573_68047646_68047805_68047881_68047973_68048878_68048998_68049080_68049295_68049662_68049789_68049961_68050067_68050136_68050255_68050486_68050665_68050740
transcript_37285.nic	chr11	+	3047	19	NIC	ENSG00000110719.10	novel	2668	20	NA	NA	-40	0	intron_retention	TRUE	canonical	3	89	junction_3	13.3786267726171	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTCTCGTCTCTCTTC	68037408	True	NA	7	True	AATAAA	-18	NA	68038984	68050895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_68039120_68041267_68041389_68041752_68041832_68042642_68042864_68042945_68043498_68043570_68043654_68043813_68043908_68044131_68044345_68044957_68045103_68047432_68047573_68047646_68047805_68047881_68047973_68048878_68048998_68049080_68049295_68049662_68049789_68049961_68050067_68050136_68050255_68050486_68050665_68050740
transcript_37288.nnic	chr11	+	3016	19	NNC	ENSG00000110719.10	novel	2668	20	NA	NA	-40	0	intron_retention	FALSE	canonical	3	14	junction_6	26.5864534335221	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTCTCGTCTCTCTTC	68037408	True	NA	7	True	AATAAA	-18	NA	68038984	68050895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_68039120_68041267_68041389_68041752_68041832_68042642_68042864_68042945_68043498_68043570_68043654_68043844_68043908_68044131_68044345_68044957_68045103_68047432_68047573_68047646_68047805_68047881_68047973_68048878_68048998_68049080_68049295_68049662_68049789_68049961_68050067_68050136_68050255_68050486_68050665_68050740
transcript_37321.nnic	chr11	-	2693	14	NNC	ENSG00000110721.12	novel	2714	12	NA	NA	-3	0	intron_retention	TRUE	canonical	0	0	junction_13	253.311301336153	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAAGCTGTCACCCTTGG	-68116468	True	NA	-14	True	AATAAA	-16	NA	68121391	68052858	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_68054048_68061952_68062035_68064524_68064632_68065785_68065895_68066428_68066517_68068878_68068938_68070188_68070294_68070723_68070858_68074716_68074831_68081403_68081458_68081726_68081849_68097018_68097131_68120827_68120965_68121110
transcript_37324.nnic	chr11	-	2839	13	NNC	ENSG00000110721.12	novel	2714	12	NA	NA	-3	0	intron_retention	FALSE	canonical	3	77	junction_11	210.35781355163	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAAGCTGTCACCCTTGG	-68116468	True	NA	-14	True	AATAAA	-16	NA	68121391	68052858	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_68054048_68061952_68062035_68064524_68064632_68065785_68065895_68066428_68066517_68068878_68068938_68070188_68070294_68070723_68070858_68074716_68074831_68081403_68081458_68081726_68081849_68097018_68097131_68120827
transcript_37325.nnic	chr11	-	2629	13	NNC	ENSG00000110721.12	novel	2714	12	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_12	202.233964478989	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAAGCTGTCACCCTTGG	-68116526	True	NA	-14	True	AATAAA	-16	NA	68121449	68052858	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_68054048_68061952_68062035_68064524_68064632_68065785_68065895_68066428_68066517_68068878_68068938_68070188_68070294_68070723_68070858_68074716_68074831_68081403_68081458_68097018_68097131_68120827_68120965_68121110
transcript_3733.known	chr1	-	1360	7	FSM	ENSG00000053371.13	ENST00000235835.8	1360	7	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_3	17.6792408082348	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTTCTCTGCTGTTAA	-19307085	True	NA	-5	True	NA	NA	NA	19312144	19303964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_19304387_19306017_19306148_19307001_19307102_19307313_19307411_19308157_19308263_19308454_19308643_19311826
transcript_37330.known	chr11	-	2714	12	FSM	ENSG00000110721.12	ENST00000265689.9	2714	12	0	0	0	0	multi-exon	TRUE	canonical	3	376	junction_10	104.120797614443	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAAGCTGTCACCCTTGG	-68116465	True	NA	-14	True	AATAAA	-16	NA	68121388	68052858	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_68054048_68061952_68062035_68064524_68064632_68065785_68065895_68066428_68066517_68068878_68068938_68070188_68070294_68070723_68070858_68074716_68074831_68081403_68081458_68097018_68097131_68120827
transcript_37331.nnic	chr11	-	2575	12	NNC	ENSG00000110721.12	novel	2714	12	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_11	237.444138711118	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAAGCTGTCACCCTTGG	-68116526	True	NA	-14	True	AATAAA	-16	NA	68121449	68052858	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_68054048_68061952_68062035_68064524_68064632_68065785_68065895_68066428_68066517_68068878_68068938_68070188_68070294_68070723_68070858_68074716_68074831_68097018_68097131_68120827_68120965_68121110
transcript_37338.known	chr11	-	1755	11	FSM	ENSG00000110721.12	ENST00000356135.9	1755	11	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_9	161.754752634969	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATCTCTTGTTTACGAT	-68116521	True	NA	-7	True	ATTAAA	-16	NA	68121444	68053819	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_68054048_68061952_68062035_68064524_68064632_68065785_68065895_68066428_68066517_68068878_68068938_68070188_68070294_68070723_68070858_68074716_68074831_68097018_68097131_68120827
transcript_37339.nnic	chr11	-	2661	11	NIC	ENSG00000110721.12	novel	2714	12	NA	NA	-5	0	intron_retention	FALSE	canonical	3	30	junction_8	211.852802672044	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAAGCTGTCACCCTTGG	-68116526	True	NA	-14	True	AATAAA	-16	NA	68121449	68052858	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_68054048_68061952_68062035_68064524_68064632_68065785_68065895_68066428_68066517_68068878_68068938_68070188_68070294_68070723_68070858_68081403_68081458_68097018_68097131_68120827
transcript_3735.known	chr1	-	1171	6	FSM	ENSG00000053371.13	ENST00000330072.9	1171	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	113.930856224291	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTAGCCTAGGTCTTGA	-19307035	True	NA	-39	True	AATAAA	-16	NA	19312094	19303998	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_19304387_19306017_19306148_19307001_19307102_19307313_19307411_19308454_19308643_19311826
transcript_37358.known	chr11	-	5718	11	FSM	ENSG00000110066.15	ENST00000304363.9	5718	11	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	98.6101414662812	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCGGTGTTCACTGTA	-68211384	True	NA	NA	False	AATAAA	-18	NA	68213296	68154862	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_68159172_68166981_68167179_68171014_68171152_68171231_68171252_68171542_68171710_68173803_68173914_68175017_68175184_68180131_68180201_68185780_68185929_68189916_68190153_68213137
transcript_37364.known	chr11	-	1599	11	FSM	ENSG00000110066.15	ENST00000402789.5	1599	11	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	88.7380414478481	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTTTTCTGAGTCTGG	-68213583	False	NA	-4	True	AATAAA	-15	NA	68213595	68165718	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_68165949_68166981_68167179_68171014_68171152_68171231_68171252_68171542_68171710_68173803_68173914_68175017_68175184_68180131_68180201_68185780_68185929_68189916_68190153_68213476
transcript_37366.known	chr11	-	2666	10	FSM	ENSG00000110066.15	ENST00000401547.6	2666	10	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_9	66.5701152688921	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTGAGTCTGGTTCC	-68211374	True	NA	0	True	AATAAA	-19	NA	68213286	68165714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_68167179_68171014_68171152_68171231_68171252_68171542_68171710_68173803_68173914_68175017_68175184_68180131_68180201_68185780_68185929_68189916_68190153_68213137
transcript_37367.known	chr11	-	2869	10	FSM	ENSG00000110066.15	ENST00000405515.5	2869	10	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_9	28.4518219599291	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTGAGTCTGGTTCC	-68213816	False	NA	0	True	AATAAA	-19	NA	68213828	68165714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_68167179_68171014_68171152_68171231_68171252_68171542_68171710_68173803_68173914_68175017_68175184_68180131_68180201_68185780_68185929_68189916_68190153_68213476
transcript_37370.known	chr11	-	1881	9	FSM	ENSG00000110066.15	ENST00000402185.6	1881	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_6	102.718973417767	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAGAAAGTAGGAGTAAAGA	-68211754	True	NA	NA	False	NA	NA	NA	68213601	68166406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_68167179_68171014_68171152_68171231_68171252_68171542_68171710_68173803_68173914_68175017_68175184_68185780_68185929_68189916_68190153_68213476
transcript_37378.known	chr11	-	980	5	FSM	ENSG00000171067.11	ENST00000533310.5	980	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_4	114.281450813332	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTCCTTTCCTTTTGCCT	-68267108	True	NA	-151	True	NA	NA	NA	68271947	68261608	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_68261726_68262730_68262919_68263691_68263867_68268053_68268252_68271645
transcript_37379.nic	chr11	-	1096	5	NIC	ENSG00000171067.11	novel	980	5	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	117	junction_1	80.1888396224811	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATCGTGTGGGTGCATCCT	-68267164	True	NA	-24	True	ATTAAA	-18	NA	68272003	68261337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_68261726_68262730_68262919_68263691_68263867_68268053_68268252_68271856
transcript_37381.nic	chr11	-	966	5	NIC	ENSG00000171067.11	novel	980	5	NA	NA	-2	-5	combination_of_known_junctions	FALSE	canonical	3	117	junction_1	80.1888396224811	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATATTTATTTTTGTAAAT	-68267164	True	NA	-10	True	ACTAAA	-16	NA	68272003	68261467	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_68261726_68262730_68262919_68263691_68263867_68268053_68268252_68271856
transcript_37382.nic	chr11	-	2310	4	NIC	ENSG00000171067.11	novel	2071	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	42	junction_3	122.52618767703	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATCGTGTGGGTGCATCCT	-68267162	True	NA	-24	True	ATTAAA	-18	NA	68272001	68261337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_68262919_68263691_68263867_68268053_68268252_68271645
transcript_37383.known	chr11	-	2071	4	FSM	ENSG00000171067.11	ENST00000304271.11	2071	4	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_1	6.94422221866655	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATCGTGTGGGTGCATCCT	-68267134	True	NA	-24	True	ATTAAA	-18	NA	68271973	68261337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_68262919_68263691_68263867_68268053_68268252_68271856
transcript_37384.nic	chr11	-	2183	4	NIC	ENSG00000171067.11	novel	980	5	NA	NA	0	-2	intron_retention	FALSE	canonical	3	42	junction_3	122.52618767703	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTATTTTTGTAAATGAT	-68267162	True	NA	-7	True	ACTAAA	-19	NA	68272001	68261464	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_68262919_68263691_68263867_68268053_68268252_68271645
transcript_37389.known	chr11	-	687	3	FSM	ENSG00000171067.11	ENST00000532534.5	687	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	3.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAACTGTGGCCGAATCCC	-68267077	True	NA	-78	True	GGGGCT	-2	NA	68271916	68267179	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_68267398_68268053_68268252_68271645
transcript_37390.known	chr11	-	610	3	FSM	ENSG00000171067.11	ENST00000529590.5	610	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	133.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTATTCCAGGGCTGCCT	-68267132	True	NA	1	True	AATAAA	-34	NA	68271971	68267100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_68267398_68268053_68268252_68271856
transcript_37395.known	chr11	-	485	3	FSM	ENSG00000171067.11	ENST00000532969.1	485	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	151	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGGTTCTCCCTGACCTT	-68267079	True	NA	NA	False	NA	NA	NA	68271918	68267460	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_68267686_68268053_68268252_68271856
transcript_37396.known	chr11	+	635	3	FSM	ENSG00000286369.2	ENST00000668632.2	642	3	2	5	0	-5	multi-exon	FALSE	canonical	0	0	junction_1	2	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTACCCAGTCTTGGGTCT	68271973	True	NA	NA	False	ATTAAA	-16	NA	68272101	68284879	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_68272177_68282813_68282996_68284501
transcript_37398.known	chr11	+	5177	23	FSM	ENSG00000162337.12	ENST00000294304.12	5177	23	0	0	0	0	multi-exon	TRUE	canonical	2	69	junction_1	14.7506128181983	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCATTCTTTCGTGCCCT	68310721	True	NA	21	True	TATAAA	-21	NA	68312590	68449275	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_68312806_68347846_68348244_68357649_68357848_68363746_68363944_68365570_68365703_68386315_68386713_68389880_68390053_68403482_68403700_68406523_68406814_68409913_68410141_68411435_68411621_68413688_68414013_68416327_68416528_68423488_68423698_68425101_68425293_68425977_68426188_68429574_68429701_68433601_68433839_68436888_68437000_68438445_68438683_68439776_68439917_68446435_68446534_68448808
transcript_37411.nic	chr11	+	5238	25	NIC	ENSG00000110075.15	novel	5072	24	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	222	junction_2	174.001751068775	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTGTACCTTGCTTGGA	68446589	True	NA	17	True	AATAAA	-24	NA	68460712	68615334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_68460828_68505144_68505272_68519500_68519652_68537658_68537892_68544837_68545025_68548066_68548205_68551120_68551187_68554144_68554258_68558565_68558680_68564302_68564433_68567013_68567167_68569747_68569898_68571039_68571105_68574108_68574225_68575957_68576044_68583042_68583130_68587926_68588025_68590659_68590715_68591575_68591707_68596096_68596219_68600340_68600495_68601862_68601970_68603341_68603493_68609903_68610024_68613065
transcript_37417.known	chr11	+	4292	24	FSM	ENSG00000110075.15	ENST00000524904.5	4292	24	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_15	164.46114105987	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAGAATCAAACGTCTAA	68446631	True	NA	-5	True	NA	NA	NA	68460754	68614575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_68460828_68519500_68519652_68537658_68537892_68544837_68545025_68548066_68548205_68551120_68551187_68554144_68554258_68558565_68558680_68564302_68564433_68567013_68567167_68569747_68569898_68571039_68571105_68574108_68574225_68575957_68576044_68583042_68583130_68587944_68588025_68590659_68590715_68591575_68591707_68596096_68596219_68600340_68600495_68601862_68601970_68603341_68603493_68609903_68610024_68613065
transcript_3742.known	chr1	+	1805	9	FSM	ENSG00000040487.13	ENST00000375155.7	1805	9	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_7	14.3652140603612	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTGCTTCTGTTGCTCCT	19311140	True	NA	24	True	AATAAA	-34	NA	19312325	19329300	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_19312359_19312728_19312890_19317599_19317842_19324632_19324763_19325494_19325583_19326244_19326388_19326530_19326624_19327226_19327413_19328571
transcript_37425.nic	chr11	+	5151	24	NIC	ENSG00000110075.15	novel	5072	24	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	222	junction_2	181.313157955061	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTGTACCTTGCTTGGA	68446589	True	NA	17	True	AATAAA	-24	NA	68460712	68615334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_68460828_68505144_68505272_68519500_68519652_68537658_68537892_68544837_68545025_68548066_68548205_68551120_68551187_68554144_68554258_68558565_68558680_68564302_68564433_68567013_68567167_68569747_68569898_68571039_68571105_68574108_68574225_68575957_68576044_68587926_68588025_68590659_68590715_68591575_68591707_68596096_68596219_68600340_68600495_68601862_68601970_68603341_68603493_68609903_68610024_68613065
transcript_37429.known	chr11	+	2771	23	FSM	ENSG00000110075.15	ENST00000524845.5	2771	23	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_14	121.695706749755	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGTGACGTCTGCTGCTGC	68446625	True	NA	NA	False	NA	NA	NA	68460748	68613117	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_68460828_68519500_68519652_68537658_68537892_68544837_68545025_68548066_68548205_68551120_68551187_68554144_68554258_68558565_68558680_68564302_68564433_68567013_68567167_68569747_68569898_68571039_68571105_68574108_68574225_68575957_68576044_68587926_68588025_68590659_68590715_68591575_68591707_68596096_68596219_68600340_68600495_68601862_68601970_68603341_68603493_68609903_68610024_68613065
transcript_3745.nic	chr1	+	2462	8	NIC	ENSG00000040487.13	novel	1805	9	NA	NA	-35	120	combination_of_known_junctions	FALSE	canonical	3	18	junction_7	19.3316912274712	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCAGGTGTGGTGGCAC	19311105	True	NA	NA	False	AATACA	-5	NA	19312290	19329107	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_19312359_19312728_19312890_19317599_19317842_19324632_19324763_19325494_19325583_19326244_19326388_19326530_19326624_19327570
transcript_3746.nic	chr1	+	2650	8	NIC	ENSG00000040487.13	novel	1805	9	NA	NA	-44	2	combination_of_known_junctions	FALSE	canonical	3	18	junction_7	19.3316912274712	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCTCCCCATGAGACCTG	19311096	True	NA	10	True	AATAAA	-20	NA	19312281	19329286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_19312359_19312728_19312890_19317599_19317842_19324632_19324763_19325494_19325583_19326244_19326388_19326530_19326624_19327570
transcript_37467.known	chr11	+	749	6	FSM	ENSG00000069482.7	ENST00000265643.4	749	6	0	0	0	0	multi-exon	FALSE	canonical	3	2351	junction_3	97.7404726814844	2820	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAATTGTCTTTTTCTT	68664268	True	NA	14	True	AATAAA	-13	NA	68684543	68691175	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_68684733_68684923_68685005_68685593_68685649_68688013_68688101_68688848_68688927_68690916
transcript_37468.known	chr11	-	2535	10	FSM	ENSG00000132749.11	ENST00000255087.10	2535	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	49.3801079558196	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGTCATTAACTTAGTA	-68750056	True	NA	-18	True	AATAAA	-19	NA	68751520	68707439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_68708501_68710873_68711050_68713269_68713408_68715836_68715940_68738699_68738789_68742317_68742395_68744990_68745112_68747207_68747367_68750189_68750700_68751419
transcript_37472.nic	chr11	-	2398	8	NIC	ENSG00000132749.11	novel	2535	10	NA	NA	-61	0	intron_retention	FALSE	canonical	3	52	junction_7	43.4295112680259	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGTCATTAACTTAGTA	-68751570	False	NA	-18	True	AATAAA	-19	NA	68751581	68707439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_68708501_68710873_68711050_68713269_68713408_68715836_68715940_68738699_68738789_68747207_68747367_68750189_68750700_68751419
transcript_37473.nic	chr11	-	2488	7	NIC	ENSG00000132749.11	novel	2535	10	NA	NA	-340	0	intron_retention	FALSE	canonical	3	66	junction_3	42.4761370915744	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGTCATTAACTTAGTA	-68750940	False	NA	-18	True	AATAAA	-19	NA	68750951	68707439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_68708501_68710873_68711050_68713269_68713408_68715836_68715940_68738699_68738789_68747207_68747367_68750189
transcript_37484.nic	chr11	-	2669	5	NIC	ENSG00000132749.11	novel	3495	5	NA	NA	-61	-5	combination_of_known_junctions	FALSE	canonical	3	52	junction_4	54.0046294311886	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCCGCTTCTCTGGAAAT	-68751570	False	NA	-6	True	AATAAA	-11	NA	68751581	68736136	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_68737886_68738699_68738789_68747207_68747367_68750189_68750700_68751419
transcript_37486.nic	chr11	-	2822	4	NIC	ENSG00000132749.11	novel	3495	5	NA	NA	-403	-5	combination_of_known_junctions	FALSE	canonical	3	69	junction_1	49.4435705291059	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCCGCTTCTCTGGAAAT	-68751003	False	NA	-6	True	AATAAA	-11	NA	68751014	68736136	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_68737886_68738699_68738789_68747207_68747367_68750189
transcript_37495.nic	chr11	-	893	3	ISM	ENSG00000132749.11	ENST00000544963.1	1235	6	-121	8684	-61	0	5prime_fragment	FALSE	canonical	3	52	junction_2	69	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTCGACTGATCATTTC	-68751570	False	NA	-36	True	ACTAAA	-19	NA	68751581	68747145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_68747367_68750189_68750700_68751419
transcript_37496.known	chr11	-	643	2	FSM	ENSG00000132749.11	ENST00000432435.2	643	2	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTCGACTGATCATTTC	-68750600	False	NA	-36	True	ACTAAA	-19	NA	68750611	68747145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_68747367_68750189
transcript_37500.known	chr11	-	5238	19	FSM	ENSG00000110090.13	ENST00000265641.10	5238	19	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_10	3.74989711793027	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGTTTCTGTCTCTTTT	-68840781	True	NA	-1	True	AATAAA	-24	NA	68841916	68754882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_68757731_68759568_68759662_68760224_68760339_68761534_68761688_68762626_68762762_68773264_68773430_68775315_68775433_68780639_68780746_68781770_68781960_68784814_68785011_68793314_68793403_68794803_68794912_68796855_68796934_68799217_68799356_68803999_68804102_68807466_68807639_68812436_68812577_68815333_68815488_68841774
transcript_37504.known	chr11	-	764	7	FSM	ENSG00000197345.13	ENST00000541279.1	764	7	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	553.075165677224	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGACCAGGTTTCTGTG	-68890206	True	NA	-12	True	AATAAA	-13	NA	68903827	68891282	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_68891396_68892889_68892994_68893321_68893456_68896514_68896679_68897926_68898013_68900547_68900606_68903722
transcript_37505.known	chr11	-	693	7	FSM	ENSG00000197345.13	ENST00000362034.7	693	7	0	0	0	0	multi-exon	TRUE	canonical	3	1442	junction_2	86.9725371725019	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCAGGTTTCTGTGTTCTG	-68890211	True	NA	-7	True	AATAAA	-18	NA	68903832	68891277	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_68891396_68892889_68892994_68893402_68893456_68896514_68896679_68897926_68898013_68900547_68900606_68903722
transcript_3751.known	chr1	+	1548	8	FSM	ENSG00000040487.13	ENST00000400548.6	1548	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	24.164402896553	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTGCTTCTGTTGCTCCT	19311155	True	NA	24	True	AATAAA	-34	NA	19312340	19329300	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_19312359_19312728_19312890_19324632_19324763_19325494_19325583_19326244_19326388_19326530_19326624_19327226_19327413_19328571
transcript_37513.known	chr11	-	932	6	FSM	ENSG00000197345.13	ENST00000567045.5	932	6	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_4	520.54609786262	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGCGCGTGACCCCACCT	-68890157	True	NA	NA	False	NA	NA	NA	68903778	68892491	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_68892994_68893402_68893456_68896514_68896679_68897926_68898013_68900534_68900606_68903722
transcript_37514.known	chr11	-	2283	6	FSM	ENSG00000197345.13	ENST00000565125.5	2283	6	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	701.256415300423	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCAGGTTTCTGTGTTCT	-68890214	True	NA	-8	True	AATAAA	-17	NA	68903835	68891278	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_68892994_68893321_68893456_68896514_68896679_68897926_68898013_68900534_68900606_68903722
transcript_37523.known	chr11	+	3914	15	FSM	ENSG00000132740.10	ENST00000255078.8	3914	15	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	12.195892583914	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGTGTGTCTGCTGCGG	68901737	True	NA	19	True	ATTAAA	-19	NA	68903890	68940601	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_68904039_68906068_68906239_68908144_68908338_68908533_68908632_68911439_68911604_68914822_68915024_68917735_68917884_68929182_68929358_68933298_68933482_68933794_68933914_68934463_68934559_68935298_68935423_68936236_68937092_68938181_68938355_68939533
transcript_3753.known	chr1	+	2175	8	FSM	ENSG00000040487.13	ENST00000375153.8	2175	8	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_6	15.0847943442449	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTGCTTCTGTTGCTCCT	19311140	True	NA	24	True	AATAAA	-34	NA	19312325	19329300	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_19312890_19317599_19317842_19324632_19324763_19325494_19325583_19326244_19326388_19326530_19326624_19327226_19327413_19328571
transcript_37530.known	chr11	+	2512	14	FSM	ENSG00000132740.10	ENST00000674955.1	2512	14	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_8	30.678134379295	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCCCAGCAGGGACCGGT	68901779	True	NA	NA	False	NA	NA	NA	68903932	68936860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_68904039_68906068_68906239_68908144_68908338_68908533_68908632_68911439_68911604_68914822_68915024_68917735_68917884_68929182_68929358_68930322_68930435_68933298_68933482_68933794_68933914_68934463_68934559_68935298_68935423_68936236
transcript_3754.known	chr1	+	1428	8	FSM	ENSG00000040487.13	ENST00000497827.1	1428	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	21.5264431595663	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCGCACCTGTAATCCTA	19311543	False	NA	4	True	AATAAA	-16	NA	19312728	19328987	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_19312890_19317599_19317842_19324632_19324763_19325525_19325583_19326244_19326388_19326530_19326624_19327226_19327413_19328571
transcript_37549.nic	chr11	+	2720	13	ISM	ENSG00000132740.10	ENST00000675615.1	2914	14	-19	2655	-19	0	5prime_fragment	FALSE	canonical	3	63	junction_3	11.4172749229694	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTCAACTAATAAGAAC	68901690	True	NA	NA	False	AAAAAG	-14	NA	68903843	68937091	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_68904039_68906068_68906239_68908144_68908338_68908533_68908632_68911439_68911604_68914822_68915024_68917735_68917884_68929182_68929358_68933298_68933482_68933794_68933914_68934463_68934559_68935298_68935423_68936236
transcript_37560.known	chr11	+	2603	12	FSM	ENSG00000132740.10	ENST00000676228.1	2603	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	25.8926582657346	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTCAACTAATAAGAAC	68901709	True	NA	NA	False	AAAAAG	-14	NA	68903862	68937091	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_68904039_68906068_68906239_68908144_68908338_68911439_68911604_68914822_68915024_68917735_68917884_68929182_68929358_68933298_68933482_68933794_68933914_68934463_68934559_68935298_68935423_68936236
transcript_37576.nnic	chr11	-	2598	3	NNC	ENSG00000172935.9	novel	2132	3	NA	NA	2094	0	intron_retention	TRUE	canonical	1	2	junction_2	12.5	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGAAGGCTTCATGCCC	-69010875	False	NA	-22	True	AATAAA	-17	NA	69011152	69004397	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_69006262_69009853_69009958_69010522
transcript_37577.known	chr11	-	2132	3	FSM	ENSG00000172935.9	ENST00000309099.7	2132	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	1	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGAAGGCTTCATGCCC	-69012969	True	NA	-22	True	AATAAA	-17	NA	69013246	69004397	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_69006262_69009853_69009958_69013082
transcript_37578.known	chr11	-	2282	3	FSM	ENSG00000172935.9	ENST00000441623.1	2282	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	13.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAGGCTTCATGCCCACA	NA	False	NA	-19	True	AATAAA	-20	NA	69013382	69004394	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_69006262_69009853_69009969_69013082
transcript_37587.known	chr11	+	4969	25	FSM	ENSG00000162341.18	ENST00000294309.8	4969	25	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_17	13.8533364412894	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAATAGAAGAAACGTAATG	69046947	True	NA	NA	False	AATAAA	-21	NA	69048931	69090597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_69049107_69054032_69054098_69054720_69054798_69055174_69055353_69057577_69057695_69062883_69062991_69063894_69063968_69067502_69067606_69070429_69070496_69071355_69071421_69071922_69072024_69072626_69072709_69072914_69073002_69078481_69078602_69078733_69078794_69078891_69079021_69079833_69079884_69081399_69081500_69083944_69084017_69085209_69085287_69085670_69085753_69085847_69085931_69086522_69086605_69087111_69087207_69087874
transcript_37609.nic	chr11	+	2568	23	NIC	ENSG00000162341.18	novel	4969	25	NA	NA	-22	226	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	18.3560402831339	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTGTGACTGGGTGTG	69046925	True	NA	27	True	NA	NA	NA	69048909	69088429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_69049107_69054032_69054098_69057577_69057695_69062883_69062991_69063894_69063968_69067502_69067606_69070429_69070496_69071355_69071421_69071922_69072024_69072626_69072709_69072914_69073002_69078481_69078602_69078733_69078794_69078891_69079021_69079833_69079884_69081399_69081500_69083944_69084017_69085209_69085287_69085670_69085753_69085847_69085931_69086522_69086605_69087111_69087207_69087874
transcript_37638.known	chr11	+	2381	3	FSM	ENSG00000172927.9	ENST00000441339.3	2381	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTAGTTTCCTGGTGCATT	69294103	True	NA	NA	False	AATAAA	-26	NA	69294154	69297287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_69294577_69295232_69295496_69295591
transcript_37639.known	chr11	+	2468	2	FSM	ENSG00000172927.9	ENST00000535653.1	2468	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTAGTTTCCTGGTGCATT	69294112	True	NA	NA	False	AATAAA	-26	NA	69294163	69297287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_69294577_69295232
transcript_37640.known	chr11	+	2376	2	FSM	ENSG00000255980.2	ENST00000545202.2	2382	2	6	0	6	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTGGTGACCATTTGTTA	NA	False	NA	NA	False	GATAAA	-18	NA	69425689	69429621	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_69425807_69427362
transcript_37642.known	chr11	+	4238	5	FSM	ENSG00000110092.4	ENST00000227507.3	4238	5	0	0	0	0	multi-exon	TRUE	canonical	3	614	junction_4	53.9785837161369	673	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTGGTGCCTGCCTCTTTG	69626629	True	NA	15	True	AATAAA	-16	NA	69641155	69654474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_69641512_69643030_69643247_69643831_69643992_69647993_69648143_69651117
transcript_37647.known	chr11	-	2484	5	FSM	ENSG00000149716.13	ENST00000279147.9	2484	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	14.6543508897528	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGGGACCATTTATAACA	-69673271	True	NA	0	True	AGTAAA	-21	NA	69675353	69665562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_69667588_69667894_69668013_69671748_69671820_69673215_69673322_69675189
transcript_37648.known	chr11	-	444	4	FSM	ENSG00000149716.13	ENST00000543562.1	444	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	15.4344492037203	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCGAGGAACAGATGTGTG	-69673268	True	NA	NA	False	NA	NA	NA	69675350	69667493	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_69667588_69667894_69668013_69671748_69671820_69675189
transcript_37649.known	chr11	-	359	4	FSM	ENSG00000149716.13	ENST00000441922.6	359	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	32.2593655651606	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGAACAGAGACCGAACGT	-69673165	False	NA	NA	False	TTTAAA	-42	NA	69675247	69667510	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_69667588_69667894_69668013_69673215_69673322_69675189
transcript_37650.known	chr11	-	817	4	FSM	ENSG00000149716.13	ENST00000539414.5	817	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	12.2565175405668	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAGACCGAACGTCGAGG	-69673240	True	NA	NA	False	NA	NA	NA	69675322	69667505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_69668013_69671748_69671820_69673215_69673322_69675189
transcript_37654.known	chr11	-	2274	3	FSM	ENSG00000149716.13	ENST00000536870.5	2274	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	20	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTGGGACCATTTATA	-69673241	True	NA	-3	True	AGTAAA	-18	NA	69675323	69665565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_69667588_69667894_69668013_69675189
transcript_37656.known	chr11	-	1821	3	FSM	ENSG00000162344.4	ENST00000294312.4	1821	3	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	5.5	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAGGTGCATTCTATTA	-69703926	False	NA	-7	True	ATTAAA	-17	NA	69704022	69698237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_69699577_69703260_69703365_69703644
transcript_37659.known	chr11	-	3165	3	FSM	ENSG00000075388.4	ENST00000168712.3	3165	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	7	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAAGACCTGGTTCCCTC	-69775204	True	NA	-20	True	ATTAAA	-25	NA	69775341	69771021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_69773486_69774023_69774128_69774744
transcript_37660.known	chr11	-	557	2	FSM	ENSG00000075388.4	ENST00000538040.1	557	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCACCATGAAGGTCACCC	-69775099	False	NA	NA	False	NA	NA	NA	69775164	69773348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_69773486_69774744
transcript_37661.known	chr11	-	1540	3	FSM	ENSG00000186895.4	ENST00000334134.4	1540	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTCGTTTGGTAGACCG	NA	False	NA	NA	False	ATTAAA	-14	NA	69819416	69809967	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_69810701_69816319_69816424_69818713
transcript_37669.known	chr11	+	1708	2	FSM	ENSG00000168040.5	ENST00000301838.5	1708	2	0	0	0	0	multi-exon	FALSE	canonical	3	617	junction_1	0	553	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTATTCCTGTTGGTGG	70198004	True	NA	28	True	ATTAAA	-33	NA	70203295	70207390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_70203746_70206132
transcript_37672.nic	chr11	+	5377	29	NIC	ENSG00000131626.19	novel	5240	28	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	79.8395952481459	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGAATACTGAGAATAAG	70265818	True	NA	78	True	AATAAA	-26	NA	70270669	70384396	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_70270915_70272172_70272437_70324401_70324504_70324846_70325012_70325499_70325575_70326261_70326364_70326596_70326819_70330172_70330320_70331959_70332095_70333469_70333554_70335562_70335695_70337364_70337428_70338373_70338454_70339170_70339307_70343668_70343893_70348188_70348421_70349922_70350040_70354300_70354453_70355638_70355812_70356160_70356255_70362094_70362177_70362287_70362489_70372214_70372391_70372476_70372575_70374917_70375094_70376531_70376601_70378029_70378196_70382087_70382159_70383002
transcript_37674.known	chr11	+	5240	28	FSM	ENSG00000131626.19	ENST00000253925.12	5240	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	57.3553168687425	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGAATACTGAGAATAAG	70265838	True	NA	78	True	AATAAA	-26	NA	70270689	70384396	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_70270915_70272172_70272437_70324401_70324504_70324846_70325012_70325499_70325575_70326261_70326364_70326596_70326819_70330172_70330320_70331959_70332095_70333469_70333554_70335562_70335695_70337364_70337428_70338373_70338454_70339170_70339307_70343668_70343893_70348188_70348421_70354300_70354453_70355638_70355812_70356160_70356255_70362094_70362177_70362287_70362489_70372214_70372391_70372476_70372575_70374917_70375094_70376531_70376601_70378029_70378196_70382087_70382159_70383002
transcript_37678.known	chr11	+	4133	26	FSM	ENSG00000131626.19	ENST00000389547.7	4133	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	56.3830329088459	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACACCAGAGAAAATAACTGA	70265865	True	NA	NA	False	NA	NA	NA	70270716	70378580	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_70270915_70272172_70272437_70324401_70324504_70324846_70325012_70325499_70325575_70326261_70326364_70326596_70326819_70330172_70330320_70331959_70332095_70333469_70333554_70335562_70335695_70337364_70337428_70338373_70338454_70339170_70339307_70343668_70343893_70348188_70348421_70354300_70354453_70355638_70355812_70356160_70356255_70362094_70362177_70362287_70362489_70372214_70372391_70372476_70372575_70374917_70375094_70376531_70376601_70378029
transcript_37680.nic	chr11	+	3344	23	ISM	ENSG00000131626.19	ENST00000389547.7	4133	26	-47	6046	-20	0	5prime_fragment	FALSE	canonical	0	0	junction_14	55.1343400662913	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTGGAAAGAAAAAGAGAAGA	70265818	True	NA	NA	False	NA	NA	NA	70270669	70372534	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_70270915_70272172_70272437_70324401_70324504_70324846_70325012_70325499_70325575_70326261_70326364_70326596_70326819_70330172_70330320_70331959_70332095_70333469_70333554_70335562_70335695_70337364_70337428_70338373_70338454_70339170_70339307_70343668_70343893_70348188_70348421_70354300_70354453_70355638_70355812_70356160_70356255_70362094_70362177_70362287_70362489_70372214_70372391_70372476
transcript_3769.known	chr1	-	1462	9	FSM	ENSG00000077549.19	ENST00000433834.5	1462	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_8	635.934892500797	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCGGCTCCGAGCCTGC	-19484654	False	327	-27	True	AATAAA	-15	NA	19484664	19339358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_19339618_19344357_19344435_19345186_19345253_19356634_19356752_19357421_19357564_19378539_19378654_19385504_19385627_19419660_19419751_19484189
transcript_37691.nic	chr11	+	3152	16	ISM	ENSG00000131626.19	ENST00000389547.7	4133	26	-47	29416	-20	864	5prime_fragment	FALSE	canonical	0	0	junction_14	59.6298210256878	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAAATGGGTTCTGCATT	70265818	True	NA	NA	False	AAAAAG	-7	NA	70270669	70349164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_70270915_70272172_70272437_70324401_70324504_70324846_70325012_70325499_70325575_70326261_70326364_70326596_70326819_70330172_70330320_70331959_70332095_70333469_70333554_70335562_70335695_70337364_70337428_70338373_70338454_70339170_70339307_70343668_70343893_70348188
transcript_37695.nic	chr11	+	2178	15	ISM	ENSG00000131626.19	ENST00000389547.7	4133	26	-47	34686	-20	-4367	5prime_fragment	FALSE	canonical	0	0	junction_14	61.6962605951817	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCAACCGTGCATGACA	70265818	True	NA	NA	False	NA	NA	NA	70270669	70343894	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_70270915_70272172_70272437_70324401_70324504_70324846_70325012_70325499_70325575_70326261_70326364_70326596_70326819_70330172_70330320_70331959_70332095_70333469_70333554_70335562_70335695_70337364_70337428_70338373_70338454_70339170_70339307_70343668
transcript_37698.nic	chr11	+	1542	10	ISM	ENSG00000131626.19	ENST00000389547.7	4133	26	-47	45026	-20	1508	5prime_fragment	FALSE	canonical	3	189	junction_1	19.0671328614335	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCATGCAGCCCTGAGGG	70265818	True	NA	65	True	NA	NA	NA	70270669	70333554	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_70270915_70272172_70272437_70324401_70324504_70324846_70325012_70325499_70325575_70326261_70326364_70326596_70326819_70330172_70330320_70331959_70332095_70333469
transcript_3770.known	chr1	-	1675	9	FSM	ENSG00000077549.19	ENST00000264202.8	1675	9	0	0	0	0	multi-exon	FALSE	canonical	3	1555	junction_8	173.515444197339	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTGGCCTTCTGTGTTCC	-19456823	True	NA	-17	True	AATAAA	-21	NA	19485539	19338774	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_19339618_19344357_19344435_19345186_19345253_19356634_19356752_19357421_19357564_19378539_19378654_19385504_19385627_19419660_19419751_19485435
transcript_37702.nic	chr11	+	542	3	ISM	ENSG00000131626.19	ENST00000389547.7	4133	26	-47	54146	-20	0	5prime_fragment	FALSE	canonical	3	189	junction_1	13	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGGGAACAGCTCCTTGA	70265818	True	NA	-49	True	ACTAAA	-13	NA	70270669	70324434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_70270915_70272172_70272437_70324401
transcript_37709.known	chr11	+	2247	19	FSM	ENSG00000085733.16	ENST00000376561.7	2247	19	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_18	73.3214005443007	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGATTTGCTTTGGTCTGT	70372063	True	NA	30	True	AATAAA	-19	NA	70398540	70436579	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_70398615_70405264_70405362_70407297_70407385_70407517_70407592_70409830_70409961_70414541_70414653_70415662_70415718_70417012_70417124_70419745_70419857_70420399_70420511_70422939_70422996_70425331_70425402_70429050_70429200_70431190_70431281_70433100_70433279_70433646_70433719_70435025_70435120_70435465_70435745_70436281
transcript_37714.known	chr11	+	3249	18	FSM	ENSG00000085733.16	ENST00000301843.13	3249	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	96.7934339618731	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCGTGATTTGCTTTGGT	70372051	True	NA	26	True	AATAAA	-15	NA	70398528	70436575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_70398615_70405264_70405362_70407297_70407385_70407517_70407592_70409830_70409961_70414541_70414653_70415662_70415718_70417012_70417124_70419745_70419857_70420399_70420511_70421469_70421581_70422939_70422996_70425331_70425402_70429050_70429200_70431190_70431281_70433100_70433279_70433646_70433719_70435025
transcript_37720.known	chr11	+	3272	17	FSM	ENSG00000085733.16	ENST00000346329.7	3272	17	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_10	31.1926974627075	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTGGTCTGTGGTCA	70398389	False	NA	35	True	AATAAA	-24	NA	70398403	70436584	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_70398615_70405264_70405362_70407297_70407385_70407517_70407592_70409830_70409961_70414541_70414653_70415662_70415718_70417012_70417124_70419745_70419857_70420399_70420511_70422939_70422996_70425331_70425402_70429050_70429200_70431190_70431281_70433100_70433279_70433646_70433719_70435025
transcript_37725.nnic	chr11	+	3051	16	NIC	ENSG00000085733.16	novel	3249	18	NA	NA	-24	0	intron_retention	FALSE	canonical	2	35	junction_9	77.4411317639979	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCGTGATTTGCTTTGGT	70372027	True	NA	26	True	AATAAA	-15	NA	70398504	70436575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_70398615_70405264_70405362_70407297_70407385_70407517_70407592_70409830_70409961_70414541_70414653_70415662_70415718_70417012_70417124_70419745_70419857_70422939_70422996_70425331_70425402_70429050_70429200_70431190_70431281_70433100_70433279_70433646_70433719_70435025
transcript_37739.nic	chr11	+	3059	5	ISM	ENSG00000085733.16	ENST00000527622.5	597	6	-32	-2091	-24	2091	intron_retention	FALSE	canonical	3	352	junction_4	7.92148975887743	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAATCTCTGCGTTAAGA	70372027	True	NA	NA	False	AATAAA	-4	NA	70398504	70412521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_70398615_70405264_70405362_70407297_70407385_70407517_70407592_70409830
transcript_37740.known	chr11	+	1087	4	FSM	ENSG00000085733.16	ENST00000482755.6	1087	4	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_2	4.98887651569859	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGGCACAGCCTGCACAA	70372059	True	NA	NA	False	NA	NA	NA	70398536	70408342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_70398615_70405264_70405362_70407297_70407385_70407517
transcript_37750.known	chr11	-	7271	11	FSM	ENSG00000162105.21	ENST00000338508.9	7271	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	19.0528213133908	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTTGTGGTTCTGATTGC	-70661595	False	223	-3	True	AATAAA	-15	NA	70661818	70469434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_70473440_70485313_70487721_70489327_70489349_70490275_70490388_70492334_70492466_70500569_70500591_70501922_70501932_70502205_70502287_70502795_70502932_70659827_70659953_70661595
transcript_37759.known	chr11	-	5738	1	FSM	ENSG00000162105.21	ENST00000606715.3	5738	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTGGTTCTGATTGCAA	NA	False	NA	-1	True	AATAAA	-17	NA	70475170	70469432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_70469400_70475200
transcript_37760.known	chr11	-	2710	10	FSM	ENSG00000172893.18	ENST00000682708.1	2710	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	387.072041656458	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAAATAAGTGGCTGTGT	NA	False	NA	NA	False	ATTAAA	-9	NA	71448435	71434420	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_71435840_71437811_71437944_71438878_71439084_71440785_71440837_71441226_71441441_71442262_71442354_71443992_71444216_71444854_71444959_71447609_71447735_71448289
transcript_37764.known	chr11	-	2695	9	FSM	ENSG00000172893.18	ENST00000683287.1	2695	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	304.345378435422	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAAATAAGTGGCTGTGT	NA	False	NA	NA	False	ATTAAA	-9	NA	71448435	71434420	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_71435840_71437811_71437944_71438878_71439084_71441226_71441441_71442262_71442354_71443956_71444216_71444854_71444959_71447609_71447735_71448289
transcript_37771.known	chr11	-	2645	9	FSM	ENSG00000172893.18	ENST00000683714.1	2645	9	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	306.308157743146	1495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTTATATTAAACTTCCC	NA	False	NA	NA	False	TTTAAA	-23	NA	71448435	71434442	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_71435840_71437803_71437944_71438878_71439084_71441226_71441441_71442262_71442354_71443992_71444216_71444854_71444959_71447609_71447735_71448289
transcript_37772.known	chr11	-	2601	9	FSM	ENSG00000172893.18	ENST00000407721.6	2601	9	0	0	0	0	multi-exon	TRUE	canonical	3	83	junction_8	281.948327491049	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGGCTGTGTGGTTTCT	-71433309	True	NA	NA	False	ATTAAA	-16	NA	71448393	71434413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_71435840_71437811_71437944_71438878_71439084_71441226_71441441_71442262_71442354_71443992_71444216_71444854_71444959_71447609_71447735_71448312
transcript_37776.nic	chr11	-	2804	9	NIC	ENSG00000172893.18	novel	2710	10	NA	NA	-4	0	intron_retention	FALSE	canonical	3	20	junction_1	303.380510868777	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGGCTGTGTGGTTTCT	NA	False	NA	NA	False	ATTAAA	-16	NA	71448439	71434413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_71435974_71437811_71437944_71438878_71439084_71441226_71441441_71442262_71442354_71443992_71444216_71444854_71444959_71447609_71447735_71448289
transcript_37779.known	chr11	-	2472	8	FSM	ENSG00000172893.18	ENST00000682880.1	2472	8	0	0	0	0	multi-exon	FALSE	canonical	3	830	junction_2	58.7839350537897	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTCTCCTGCCTCAGCC	NA	False	NA	NA	False	NA	NA	NA	71448435	71436579	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_71437944_71438878_71439084_71441226_71441441_71442262_71442354_71443992_71444216_71444854_71444959_71447609_71447735_71448289
transcript_37784.known	chr11	+	680	2	FSM	ENSG00000254682.2	ENST00000529369.2	792	2	112	0	112	0	multi-exon	FALSE	canonical	3	150	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGAATTGTGTGTTTTT	71447048	True	NA	6	True	AATAAA	-19	NA	71448673	71452157	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_71448886_71451689
transcript_37791.known	chr11	+	2679	21	FSM	ENSG00000172890.13	ENST00000319023.7	2679	21	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_10	14.6876648926914	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGTCTGGGGACCAGTC	71450881	True	NA	NA	False	NA	NA	NA	71453202	71501816	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_71453382_71455109_71455171_71458427_71458545_71463431_71463486_71464052_71464143_71472448_71472501_71473277_71473367_71473568_71473687_71474394_71474527_71478394_71478470_71480754_71480880_71481355_71481405_71481922_71482026_71482848_71483018_71484311_71484448_71485541_71485649_71490844_71490977_71491833_71491904_71497482_71497612_71498351_71498529_71501301
transcript_37795.nic	chr11	+	2389	20	ISM	ENSG00000172890.13	ENST00000319023.7	2679	21	-25	3088	-25	0	5prime_fragment	FALSE	canonical	3	118	junction_10	14.5507041647389	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGTGTCCAACATGACAT	71450856	True	NA	NA	False	AATAAA	-14	NA	71453177	71498728	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_71453382_71455109_71455171_71458427_71458545_71463431_71463486_71464052_71464143_71472448_71472501_71473277_71473367_71473568_71473687_71474394_71474527_71478394_71478470_71480754_71480880_71481355_71481405_71481922_71482026_71482848_71483018_71484311_71484448_71485541_71485649_71490844_71490977_71491833_71491904_71497482_71497612_71498351
transcript_3780.known	chr1	-	2063	8	FSM	ENSG00000077549.19	ENST00000482808.2	2063	8	0	0	0	0	multi-exon	FALSE	canonical	3	1555	junction_7	176.016928684924	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTGTGAAAGAGAGAAGAAA	-19456821	True	NA	-34	True	AAAACA	-26	NA	19485537	19339136	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_19339618_19344357_19345253_19356634_19356752_19357421_19357564_19378539_19378654_19385504_19385627_19419660_19419751_19485435
transcript_37800.nnic	chr11	+	2312	20	NIC	ENSG00000172890.13	novel	2679	21	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	33.8286377393761	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGAATCCAATGCACATG	71450856	True	NA	11	True	AATAAA	-19	NA	71453177	71501541	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_71453382_71455109_71455171_71463431_71463486_71464052_71464143_71472448_71472501_71473277_71473367_71473568_71473687_71474394_71474527_71478394_71478470_71480754_71480880_71481355_71481405_71481922_71482026_71482848_71483018_71484311_71484448_71485541_71485649_71490844_71490977_71491833_71491904_71497482_71497612_71498351_71498529_71501301
transcript_37806.known	chr11	+	603	5	FSM	ENSG00000172890.13	ENST00000525245.1	603	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	79.0284758805331	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACTGTCTTATTTATTTGC	71451034	False	NA	22	True	AATAAA	-31	NA	71453355	71460947	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_71453382_71455109_71455171_71458427_71458545_71460040_71460214_71460721
transcript_37807.known	chr11	+	720	4	FSM	ENSG00000172890.13	ENST00000527538.5	720	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	74.5221816344339	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCCGACCCCCACGTCTG	71450919	True	NA	NA	False	NA	NA	NA	71453240	71460075	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_71453382_71455109_71455171_71458427_71458545_71459674
transcript_37810.known	chr11	+	963	3	FSM	ENSG00000172890.13	ENST00000534634.5	963	3	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_2	3	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGAGGCCTCTGCACGC	71451483	False	NA	NA	False	NA	NA	NA	71453108	71459056	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_71453382_71455109_71455171_71458427
transcript_37812.known	chr11	+	524	2	FSM	ENSG00000172890.13	ENST00000533612.1	524	2	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTTTGCGTCCCCACA	71450887	True	NA	NA	False	NA	NA	NA	71453208	71455460	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_71453382_71455109
transcript_37814.known	chr11	+	839	5	FSM	ENSG00000172890.13	ENST00000524949.5	839	5	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_4	15.2561463023924	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGCAAATAAAAAGGGTGT	71450909	True	NA	NA	False	AATGAA	-45	NA	71453230	71464508	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_71453382_71455109_71455171_71458427_71458545_71463431_71463486_71464052
transcript_37818.nic	chr11	+	2226	6	FSM	ENSG00000158483.18	ENST00000688029.1	2225	6	-4	3	0	1	multi-exon	FALSE	canonical	2	4	junction_4	34.226305672684	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACACCCCTTAATCTACAG	71785845	True	NA	NA	False	AATAAA	-18	NA	71787479	71801234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_71787633_71789782_71789846_71791735_71791820_71793379_71793482_71796016_71796167_71799560
transcript_37822.known	chr11	+	952	5	FSM	ENSG00000158483.18	ENST00000426628.7	956	5	4	0	-2	0	multi-exon	TRUE	canonical	3	11	junction_2	29.8872882677569	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGCTGCAGCTGCCACAT	71785883	True	NA	NA	False	NA	NA	NA	71787517	71800103	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_71787633_71789782_71789846_71791738_71791820_71796016_71796167_71799560
transcript_37827.known	chr11	+	2111	5	FSM	ENSG00000158483.18	ENST00000359244.9	2111	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	39.3605132080363	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCCTTAATCTACAGATG	71785879	True	NA	NA	False	AATAAA	-21	NA	71787513	71801237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_71787633_71789782_71789846_71793379_71793482_71796016_71796167_71799560
transcript_37831.known	chr11	+	2010	4	FSM	ENSG00000158483.18	ENST00000346333.11	2044	4	29	5	-1	1	multi-exon	FALSE	canonical	3	61	junction_2	11.4406682011537	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACACCCCTTAATCTACAG	71785875	True	NA	NA	False	AATAAA	-18	NA	71787509	71801234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_71787633_71789782_71789846_71796016_71796167_71799560
transcript_37833.known	chr11	+	990	4	FSM	ENSG00000158483.18	ENST00000688077.1	2141	4	17	1134	0	-4	multi-exon	FALSE	canonical	2	3	junction_3	35.8143360495021	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCCCGCTGCAGCTGCC	71785902	True	NA	NA	False	NA	NA	NA	71787536	71800099	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_71787633_71789782_71789846_71796016_71796309_71799560
transcript_37850.known	chr11	+	2282	9	FSM	ENSG00000137522.18	ENST00000361756.8	2282	9	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_2	19.3067345763078	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTATCTTGCTTTCTTCT	71922999	True	NA	24	True	AATAAA	-29	NA	71929045	71997597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_71929125_71957226_71957265_71960749_71960892_71982760_71982916_71987003_71987112_71990596_71990718_71994718_71994853_71995449_71995552_71996194
transcript_37853.known	chr11	+	2375	9	FSM	ENSG00000137522.18	ENST00000526549.5	2375	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	102.650423160355	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTATCTTGCTTTCTT	71923004	True	NA	22	True	AATAAA	-27	NA	71929050	71997595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_71929125_71960749_71960892_71962151_71962290_71982760_71982916_71987003_71987112_71990596_71990718_71994718_71994853_71995449_71995552_71996194
transcript_37864.known	chr11	+	2202	8	FSM	ENSG00000137522.18	ENST00000530137.1	2202	8	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	58.5752611986476	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAACATTTATCTTGCTT	71923035	True	NA	18	True	AATAAA	-23	NA	71929081	71997591	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_71929125_71960749_71960892_71982760_71982916_71987003_71987112_71990596_71990718_71994718_71994853_71995449_71995552_71996194
transcript_3787.known	chr1	-	1686	10	FSM	ENSG00000077549.19	ENST00000375142.5	1686	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	759.630823265039	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAGAAAAGAAA	-19456769	True	NA	-65	True	AAGAAA	-36	NA	19485485	19338822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_19339618_19342751_19342865_19344357_19344435_19345186_19345253_19356634_19356752_19357421_19357564_19378539_19378654_19385504_19385627_19419660_19419751_19485435
transcript_37870.known	chr11	+	812	7	FSM	ENSG00000137522.18	ENST00000525243.5	812	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	79.3923100110388	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGGCCACTCAGGACCCC	71923029	True	NA	NA	False	NA	NA	NA	71929075	71996420	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_71929125_71957226_71957265_71960749_71960892_71990596_71990718_71994718_71994853_71995449_71995552_71996194
transcript_37872.known	chr11	+	2132	7	FSM	ENSG00000137522.18	ENST00000393713.7	2132	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	89.6121271554991	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTATCTTGCTTTCTTCT	71922987	True	NA	24	True	AATAAA	-29	NA	71929033	71997597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_71929125_71960749_71960892_71982760_71982916_71987003_71987112_71990596_71990718_71995439_71995552_71996194
transcript_37874.known	chr11	+	786	7	FSM	ENSG00000137522.18	ENST00000530655.5	786	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	97.1552308879398	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGTCCAAGGCATCAACT	71922980	True	NA	NA	False	NA	NA	NA	71929026	71996275	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_71929125_71960749_71960892_71987003_71987112_71990596_71990718_71994718_71994853_71995449_71995552_71996194
transcript_37877.known	chr11	+	721	6	FSM	ENSG00000137522.18	ENST00000528683.5	721	6	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_2	7.21110255092798	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGGCACTAGGGTGAGA	71923000	True	NA	NA	False	NA	NA	NA	71929046	71990796	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_71929125_71957226_71957265_71960749_71960892_71982760_71982916_71987003_71987112_71990596
transcript_37878.known	chr11	+	571	6	FSM	ENSG00000137522.18	ENST00000530058.5	571	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	81.7435012707432	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAACGGGACTTTGCAGA	71922971	True	NA	NA	False	NA	NA	NA	71929017	71990663	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_71929125_71957226_71957265_71960749_71960892_71982806_71982916_71987003_71987112_71990596
transcript_3791.known	chr1	+	438	5	FSM	ENSG00000173436.15	ENST00000485362.1	438	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2335.18033297217	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATTAAACAAAAAGAG	19555523	True	NA	-10	True	NA	NA	NA	19597069	19626606	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_19597110_19597833_19597854_19622099_19622148_19623473_19623584_19626386
transcript_37913.known	chr11	-	2331	15	FSM	ENSG00000137497.19	ENST00000537217.5	2331	15	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_14	44.4313274294484	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTGGCCCAGGAGAAGGAC	-72075712	True	NA	NA	False	AAAAAG	-16	NA	72080474	72015428	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72016261_72016407_72016531_72017686_72017828_72018182_72018301_72018395_72018514_72018822_72018981_72019493_72019618_72021203_72021292_72022338_72022420_72023064_72023148_72024273_72024354_72029204_72029291_72035901_72035976_72069841_72069912_72080319
transcript_37919.known	chr11	-	2766	14	FSM	ENSG00000137497.19	ENST00000542977.5	2766	14	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_13	46.937198379494	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAGAAGGTGGCAGGCA	-72040695	True	NA	NA	False	NA	NA	NA	72041137	72014947	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72016261_72016407_72016531_72017686_72017828_72018182_72018301_72018395_72018514_72018822_72018981_72019493_72019618_72021203_72021292_72022338_72022420_72023064_72023148_72024273_72024354_72029204_72029291_72035901_72035976_72040958
transcript_3792.known	chr1	+	657	5	FSM	ENSG00000173436.15	ENST00000481464.5	657	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2346.33863711102	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCATTGCATGGCCTTTGT	19555492	True	NA	13	True	AATAAA	-18	NA	19597038	19626629	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_19597110_19600786_19600972_19622099_19622148_19623473_19623584_19626386
transcript_37928.known	chr11	+	2642	6	FSM	ENSG00000184154.16	ENST00000289488.8	2129	6	-513	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	5.25357021462548	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCTTGCTGACTCCAT	72080247	True	NA	7	True	GATAAA	-21	NA	72080336	72096895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_72080886_72088296_72088381_72089028_72089166_72093495_72093702_72094947_72095097_72095378
transcript_3793.known	chr1	+	583	5	FSM	ENSG00000173436.15	ENST00000467029.5	583	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	2292.63025802243	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAAGTCCATTGCATGGC	19555454	True	NA	7	True	AATAAA	-12	NA	19597000	19626623	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_19597110_19617257_19617337_19622099_19622148_19623473_19623584_19626386
transcript_37931.known	chr11	+	814	6	FSM	ENSG00000184154.16	ENST00000538478.5	814	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	12.0896650077659	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTAGAGATGTTCTCTA	72080600	True	NA	24	True	AATAAA	-38	NA	72080844	72095618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_72080886_72088339_72088381_72089028_72089166_72093495_72093702_72094947_72095097_72095378
transcript_37933.known	chr11	-	812	6	FSM	ENSG00000110200.9	ENST00000542531.5	812	6	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_5	413.638779613324	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCATGTCTATTCCCTAT	-72105066	False	NA	-6	True	AATAAA	-19	NA	72112279	72109588	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72109929_72110087_72110226_72110543_72110604_72111156_72111282_72111411_72111497_72112215
transcript_37935.known	chr11	-	867	6	FSM	ENSG00000110200.9	ENST00000538393.5	867	6	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_4	270.146330717261	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCCATGTCTATTCCCTA	-72105556	True	NA	-7	True	AATAAA	-18	NA	72112769	72109589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72109929_72110087_72110226_72110543_72110604_72111156_72111282_72111411_72111497_72112649
transcript_37936.known	chr11	-	872	6	FSM	ENSG00000110200.9	ENST00000545680.5	872	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	360.887794196479	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGTCTATTCCCTATTT	-72105541	True	NA	-4	True	AATAAA	-21	NA	72112754	72109586	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72109941_72110087_72110226_72110543_72110604_72111156_72111287_72111411_72111497_72112649
transcript_37938.known	chr11	-	848	6	FSM	ENSG00000110200.9	ENST00000535234.5	848	6	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_4	345.532863849446	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCATGTCTATTCCCTAT	-72105561	True	NA	-6	True	AATAAA	-19	NA	72112774	72109588	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72109929_72110087_72110226_72110543_72110604_72111156_72111287_72111441_72111497_72112649
transcript_3794.known	chr1	+	3723	4	FSM	ENSG00000173436.15	ENST00000322753.7	3723	4	0	0	0	0	multi-exon	FALSE	canonical	3	4584	junction_3	125.393602530414	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTGACTCCATGGCGCT	19555432	True	NA	16	True	AATAAA	-22	NA	19596978	19629820	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_19597110_19622099_19622148_19623473_19623584_19626386
transcript_37941.known	chr11	+	1270	5	FSM	ENSG00000184154.16	ENST00000423494.6	1270	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	14.0445719051881	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGACTATAGGCACCTACTA	72080567	True	NA	NA	False	NA	NA	NA	72080811	72096135	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_72080886_72088296_72088381_72093495_72093702_72094947_72095097_72095378
transcript_37945.known	chr11	-	899	5	FSM	ENSG00000149357.10	ENST00000535872.1	899	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	475.435786936575	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTTGTGACCAGGGTCTG	-72092070	True	NA	-94	True	NA	NA	NA	72103297	72097426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72097915_72098288_72098416_72098780_72098859_72099110_72099239_72103219
transcript_37946.known	chr11	-	1089	5	FSM	ENSG00000149357.10	ENST00000278671.10	1089	5	0	0	0	0	multi-exon	FALSE	canonical	3	942	junction_1	86.1945473913518	3419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGGTTCTGGCCCCTC	-72092070	True	NA	-5	True	GATAAA	-18	NA	72103297	72097291	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72097915_72098288_72098416_72098780_72098859_72099110_72099257_72103182
transcript_37948.known	chr11	-	704	5	FSM	ENSG00000110200.9	ENST00000545944.5	704	5	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_4	382.162514514441	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCCATGTCTATTCCCTA	-72105473	True	NA	-7	True	AATAAA	-18	NA	72112686	72109589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72109929_72110087_72110226_72110543_72110604_72111156_72111287_72112649
transcript_37951.known	chr11	+	2049	4	FSM	ENSG00000184154.16	ENST00000642510.1	2049	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	15.121728296285	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTAAGATTTCATTTGAT	72080576	False	NA	-36	True	NA	NA	NA	72080665	72096852	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_72080886_72093495_72093702_72094947_72095097_72095378
transcript_37954.known	chr11	-	1346	4	FSM	ENSG00000149357.10	ENST00000538404.1	1346	4	0	0	0	0	multi-exon	FALSE	canonical	3	1115	junction_3	17.3781471969828	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTCTTTTTTTGTTTTG	-72092009	True	NA	-15	True	AATGAA	-38	NA	72103236	72097347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72098416_72098780_72098859_72099110_72099257_72103182
transcript_37955.known	chr11	-	2276	7	FSM	ENSG00000137497.19	ENST00000540626.5	2276	7	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_6	29.0688837074973	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGAGTTGACTTGATCG	-72007894	False	NA	-3	True	AATAAA	-20	NA	72007916	72002863	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72003539_72003886_72004100_72004224_72004342_72004639_72004817_72005232_72005370_72006034_72006264_72007188
transcript_37956.known	chr11	+	930	4	FSM	ENSG00000110195.14	ENST00000393676.5	930	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	4.96655480858378	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGTCTTGAGAATTATT	72192090	True	NA	2	True	AATAAA	-13	NA	72192139	72196299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_72192342_72195270_72195460_72195611_72195748_72195896
transcript_37963.nic	chr11	+	4663	29	NIC	ENSG00000165458.15	novel	4789	28	NA	NA	-86	-174	combination_of_known_junctions	TRUE	canonical	3	97	junction_1	50.785601265697	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTTCTCACTGTCTCCTG	72223816	False	NA	1	True	CATAAA	-13	NA	72223857	72238931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_72223961_72224779_72225167_72228189_72228254_72228347_72228499_72228726_72228848_72229089_72229231_72229464_72229559_72229662_72229753_72229923_72230020_72230120_72230272_72230361_72230469_72230795_72230899_72230992_72231190_72231497_72231616_72232239_72232337_72232625_72232765_72232874_72232975_72233074_72233164_72233440_72233523_72233654_72233745_72234280_72234395_72234526_72234616_72235115_72235204_72235295_72235452_72235674_72235754_72235845_72235987_72237123_72237797_72238041_72238176_72238262
transcript_37964.nic	chr11	+	4837	29	NIC	ENSG00000165458.15	novel	4789	28	NA	NA	-86	0	combination_of_known_junctions	FALSE	canonical	3	97	junction_1	50.785601265697	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGAGTAAAACTTCAATAAA	72223816	False	NA	NA	False	AATAAA	-17	NA	72223857	72239105	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_72223961_72224779_72225167_72228189_72228254_72228347_72228499_72228726_72228848_72229089_72229231_72229464_72229559_72229662_72229753_72229923_72230020_72230120_72230272_72230361_72230469_72230795_72230899_72230992_72231190_72231497_72231616_72232239_72232337_72232625_72232765_72232874_72232975_72233074_72233164_72233440_72233523_72233654_72233745_72234280_72234395_72234526_72234616_72235115_72235204_72235295_72235452_72235674_72235754_72235845_72235987_72237123_72237797_72238041_72238176_72238262
transcript_37966.nnic	chr11	+	5061	29	NNC	ENSG00000165458.15	novel	4789	28	NA	NA	-86	0	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_1	54.9502906159331	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGAGTAAAACTTCAATAAA	72223816	False	NA	NA	False	AATAAA	-17	NA	72223857	72239105	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_72224185_72224779_72225167_72228189_72228254_72228347_72228499_72228726_72228848_72229089_72229231_72229464_72229559_72229662_72229753_72229923_72230020_72230120_72230272_72230361_72230469_72230795_72230899_72230992_72231190_72231497_72231616_72232239_72232337_72232625_72232765_72232874_72232975_72233074_72233164_72233440_72233523_72233654_72233745_72234280_72234395_72234526_72234616_72235115_72235204_72235295_72235452_72235674_72235754_72235845_72235987_72237123_72237797_72238041_72238176_72238262
transcript_3797.known	chr1	+	3678	3	FSM	ENSG00000173436.15	ENST00000617872.4	3678	3	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	2194.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGACTCCATGGCGCTT	19555430	True	NA	17	True	AATAAA	-23	NA	19596976	19629821	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_19597110_19623473_19623584_19626386
transcript_37977.known	chr11	+	4789	28	FSM	ENSG00000165458.15	ENST00000298229.7	4789	28	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_4	35.6789525395714	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGACAACCAAAAAAATTAGG	72223614	True	NA	NA	False	AATAAA	-23	NA	72224766	72239147	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_72225167_72228189_72228254_72228347_72228499_72228726_72228848_72229089_72229231_72229464_72229559_72229662_72229753_72229923_72230020_72230120_72230272_72230361_72230469_72230795_72230899_72230992_72231190_72231497_72231616_72232239_72232337_72232625_72232765_72232874_72232975_72233074_72233164_72233440_72233523_72233654_72233745_72234280_72234395_72234526_72234616_72235115_72235204_72235295_72235452_72235674_72235754_72235845_72235987_72237123_72237797_72238041_72238176_72238262
transcript_3798.known	chr1	+	2024	4	FSM	ENSG00000158747.15	ENST00000375136.8	2024	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	10.9645894689324	186	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTCTCCTCCTCACTGA	19643333	True	NA	14	True	AATAAA	-14	NA	19644310	19658452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_19644447_19655011_19655201_19655323_19655436_19656865
transcript_37980.known	chr11	-	9963	16	FSM	ENSG00000162129.14	ENST00000538039.6	9963	16	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_7	16.4376262141331	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAATTGACAGCACTTTTA	-72432274	True	NA	NA	False	AATAAA	-15	NA	72434531	72285494	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72293616_72294021_72294127_72294324_72294445_72294619_72294694_72295491_72295649_72301802_72301965_72302303_72302349_72307198_72307255_72308526_72308605_72317105_72317221_72329706_72329805_72358879_72359009_72380280_72380385_72402965_72403053_72430311_72430364_72434071
transcript_37983.known	chr11	-	2071	15	FSM	ENSG00000162129.14	ENST00000340729.9	2071	15	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_13	27.9800402619658	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTTACCTTCCCCTC	-72432277	True	NA	-9	True	AATAAA	-23	NA	72434534	72293302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72293616_72294021_72294127_72294324_72294445_72294619_72294694_72295491_72295649_72301802_72301965_72302303_72302349_72307198_72307255_72308526_72308605_72317105_72317221_72329706_72329805_72358879_72359009_72380280_72380385_72430311_72430364_72434071
transcript_37984.known	chr11	-	612	3	FSM	ENSG00000162129.14	ENST00000542555.2	612	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	65	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGTATGTGTGATTCAGA	-72432073	False	NA	-5	True	ATTAAA	-38	NA	72434330	72428805	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72429107_72430311_72430364_72434071
transcript_37989.nic	chr11	-	2874	14	ISM	ENSG00000186642.16	ENST00000376450.7	3355	21	57539	-1	-419	0	intron_retention	FALSE	canonical	3	11	junction_13	5.27694550342846	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTCCCCCATGGGGCTGT	-72584843	False	NA	-10	True	AATAAA	-18	NA	72584892	72576140	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_72577595_72578232_72578340_72578475_72578515_72578896_72579010_72579283_72579384_72579533_72579609_72580576_72580625_72580885_72580974_72581356_72581480_72581876_72581948_72582443_72582567_72583437_72583516_72584200_72584314_72584550
transcript_37993.known	chr11	+	664	2	FSM	ENSG00000256633.1	ENST00000545254.1	664	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGACTCCAGAGACCAGC	72584241	True	NA	NA	False	NA	NA	NA	72584571	72587979	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_72585057_72587800
transcript_37994.known	chr11	-	4284	31	FSM	ENSG00000186642.16	ENST00000334456.10	4284	31	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_24	8.9196412483911	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTCCCCCATGGGGCTGT	-72674412	False	NA	-10	True	AATAAA	-18	NA	72674422	72576140	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72577595_72578232_72578340_72578475_72578515_72578896_72579010_72579283_72579384_72579533_72579609_72580576_72580625_72580885_72580974_72581356_72581480_72581876_72581948_72582443_72582567_72583437_72583516_72584200_72584314_72584550_72584729_72584871_72584945_72585370_72585435_72585553_72585594_72586069_72586182_72588783_72588915_72589174_72589241_72589750_72589793_72589906_72589982_72590191_72590245_72590426_72590581_72591296_72591357_72596592_72596649_72597509_72597620_72605137_72605227_72608661_72608752_72642253_72642327_72674136
transcript_37997.known	chr11	-	5156	35	FSM	ENSG00000186635.15	ENST00000393609.8	5156	35	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	81.6016836535038	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCTGAGGCCTGTGATT	-72745000	True	NA	-5	True	TATAAA	-23	NA	72752408	72685068	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72685682_72686041_72686192_72687438_72687503_72687687_72687739_72688454_72688538_72692752_72692786_72693324_72693471_72693691_72693806_72694979_72695098_72695386_72695456_72695541_72695629_72695717_72695866_72696548_72696655_72696982_72697196_72697322_72697487_72697597_72697650_72697910_72698107_72699004_72699108_72699416_72699553_72701648_72701784_72702904_72703080_72704151_72704335_72705804_72705891_72707174_72707375_72709869_72709977_72710384_72710588_72711020_72711142_72711429_72711500_72712195_72712340_72712437_72712569_72713175_72713244_72714151_72714322_72726619_72727173_72732514_72732598_72752327
transcript_38.known	ERCC-00096	+	1091	1	FSM	ERCC-00096A	DQ459429	1091	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21551	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1091	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00096_+_0_1100
transcript_38005.nic	chr11	-	5162	34	NIC	ENSG00000186635.15	novel	5156	35	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	3	171	junction_32	59.7274956563034	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTATGGTGCTGAGGCCT	-72745045	True	NA	-11	True	TATAAA	-17	NA	72752453	72685074	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_72685682_72686041_72686192_72687438_72687503_72687687_72687739_72688454_72688538_72693324_72693471_72693691_72693806_72694979_72695098_72695386_72695456_72695541_72695629_72695717_72695866_72696548_72696655_72696982_72697196_72697322_72697487_72697597_72697650_72697910_72698107_72699004_72699108_72699416_72699553_72701648_72701784_72702904_72703080_72704151_72704335_72705804_72705891_72707174_72707375_72709869_72709977_72710384_72710588_72711020_72711142_72711429_72711500_72712195_72712340_72712437_72712569_72713175_72713244_72714151_72714322_72726619_72727173_72732514_72732598_72752327
transcript_38008.nnic	chr11	-	5079	33	NIC	ENSG00000186635.15	novel	5156	35	NA	NA	-45	0	combination_of_known_splicesites	FALSE	canonical	3	115	junction_32	61.1998519197555	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTATGGTGCTGAGGCCT	-72745045	True	NA	-11	True	TATAAA	-17	NA	72752453	72685074	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_72685682_72686041_72686192_72687438_72687503_72687687_72687739_72688454_72688538_72693324_72693471_72693691_72693806_72694979_72695098_72695386_72695456_72695541_72695629_72695717_72695866_72696548_72696655_72696982_72697196_72697322_72697487_72697597_72697650_72697910_72698107_72699004_72699108_72699416_72699553_72701648_72701784_72702904_72703080_72704151_72704335_72705804_72705891_72707174_72707375_72709869_72709977_72710384_72710588_72711020_72711142_72711429_72711500_72712195_72712340_72712437_72712569_72713175_72713244_72714151_72714322_72726619_72727173_72752327
transcript_38009.nic	chr11	-	4969	33	NIC	ENSG00000186635.15	novel	5156	35	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_20	75.3514098138681	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTATGGTGCTGAGGCCT	-72745035	True	NA	-11	True	TATAAA	-17	NA	72752443	72685074	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_72685682_72686041_72686192_72687438_72687503_72687687_72687739_72688454_72688538_72693324_72693471_72693691_72693806_72694979_72695098_72695386_72695456_72695541_72695629_72695717_72695866_72696548_72696655_72696982_72697196_72697322_72697487_72697597_72697650_72697910_72698107_72699004_72699108_72699416_72699553_72701648_72701784_72702904_72703080_72705804_72705891_72707174_72707375_72709869_72709977_72710384_72710588_72711020_72711142_72711429_72711500_72712195_72712340_72712437_72712569_72713175_72713244_72714151_72714322_72726619_72727173_72732514_72732598_72752327
transcript_38013.known	chr11	-	4066	32	FSM	ENSG00000186635.15	ENST00000426523.5	4066	32	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_31	74.3314706824703	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATGTGAGCCAGCGGGGG	-72721981	False	NA	NA	False	NA	NA	NA	72722028	72685587	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72685682_72686041_72686192_72687438_72687503_72687687_72687739_72688454_72688538_72693324_72693471_72693691_72693806_72694979_72695098_72695386_72695456_72695541_72695629_72695717_72695866_72696548_72696655_72696982_72697196_72697322_72697487_72697597_72697650_72697910_72698107_72699004_72699108_72699416_72699553_72701648_72701784_72702904_72703080_72704151_72704335_72705804_72705891_72707174_72707375_72709869_72709977_72710384_72710588_72711020_72711142_72711429_72711500_72712195_72712340_72712437_72712569_72713175_72713244_72714151_72714322_72721849
transcript_3802.known	chr1	+	3800	3	FSM	ENSG00000158748.4	ENST00000289753.2	3800	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTGTGGTGTGGACTGG	19664789	True	NA	NA	False	AATAAA	-16	NA	19664874	19680966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_19666468_19678566_19678726_19678918
transcript_3804.known	chr1	-	2946	16	FSM	ENSG00000162542.14	ENST00000294543.11	2946	16	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_15	14.9383920003311	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACCACTTCTTGAGCATG	-19799721	True	NA	-28	True	AATAAA	-16	NA	19799916	19682239	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_19683445_19694433_19694552_19700767_19700886_19737371_19737457_19739823_19739961_19740776_19740942_19745531_19745652_19746455_19746600_19747162_19747261_19755633_19755767_19770541_19770570_19771307_19771483_19780579_19780767_19787025_19787118_19798136_19798216_19799854
transcript_38052.known	chr11	-	1100	7	FSM	ENSG00000214530.10	ENST00000537947.5	1100	7	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_5	15.1620872207255	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGCAGCATGCGGACTCA	-72780971	True	NA	NA	False	NA	NA	NA	72781893	72755015	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72755143_72755700_72755754_72757766_72757885_72758529_72758634_72759233_72759382_72780974_72781295_72781663
transcript_38053.known	chr11	-	2330	7	FSM	ENSG00000214530.10	ENST00000334805.11	2330	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	46.2228899524419	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGCTCATCACTGTGCCT	-72793892	True	NA	-17	True	AATAAA	-17	NA	72794047	72754728	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72755143_72755700_72755754_72757766_72757885_72758529_72758634_72759233_72759382_72780974_72781295_72792874
transcript_38054.known	chr11	-	1678	7	FSM	ENSG00000214530.10	ENST00000538536.5	1678	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	62.9726572057711	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCACTTTCTCCCCTCC	-72793488	False	NA	-127	True	NA	NA	NA	72793643	72754838	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72755143_72755700_72755754_72757766_72757885_72758529_72758634_72759233_72759382_72781112_72781295_72792874
transcript_38059.known	chr11	-	4710	20	FSM	ENSG00000137478.15	ENST00000409418.9	4710	20	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	8.52371630289209	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTCTAAGTTTTAATAT	-73142272	False	NA	-7	True	AATAAA	-14	NA	73142318	72836744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_72838875_72840876_72840960_72841453_72841584_72842620_72842842_72843150_72843329_72843448_72843533_72849754_72849890_72867864_72868027_72887469_72887575_72889828_72889946_72902542_72902639_72921827_72921951_72984087_72984217_72985061_72985117_72988963_72989098_73000989_73001135_73015808_73015886_73083694_73083741_73140030_73140129_73141856
transcript_3807.nic	chr1	-	2941	15	NIC	ENSG00000162542.14	novel	2946	16	NA	NA	-47	0	intron_retention	FALSE	canonical	3	7	junction_14	10.74186925549	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTACCACTTCTTGAGCA	-19799931	False	NA	-30	True	AATAAA	-14	NA	19799992	19682241	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_19683445_19694433_19694552_19700767_19700886_19737371_19737457_19739823_19739961_19740776_19740942_19745531_19745652_19746455_19746600_19747162_19747261_19755633_19755767_19770541_19770570_19771307_19771483_19780579_19780767_19787025_19787118_19799854
transcript_38071.known	chr11	+	2254	18	FSM	ENSG00000168010.11	ENST00000435507.6	2254	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	29.3427425404032	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCGTCTGCCTACCTCT	72813505	True	NA	13	True	NA	NA	NA	72814414	72829633	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_72814564_72816727_72816828_72817755_72817856_72821547_72821742_72822043_72822296_72822477_72822544_72822847_72822962_72824059_72824123_72824733_72824843_72825301_72825408_72826172_72826244_72826517_72826590_72826702_72826824_72827187_72827294_72828358_72828509_72828728_72828777_72828882_72828985_72829302
transcript_38073.known	chr11	+	2140	18	FSM	ENSG00000168010.11	ENST00000321297.10	2140	18	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	26.9468270467837	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTCTGCCTACCTCTTT	72813501	True	NA	15	True	NA	NA	NA	72814410	72829635	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_72814564_72816727_72816828_72817755_72817856_72821667_72821742_72822043_72822296_72822477_72822544_72822847_72822962_72824059_72824123_72824733_72824843_72825301_72825408_72826172_72826244_72826517_72826590_72826702_72826824_72827187_72827294_72828358_72828509_72828728_72828777_72828882_72828985_72829302
transcript_38082.nic	chr11	+	2795	17	NIC	ENSG00000168010.11	novel	2140	18	NA	NA	-39	0	intron_retention	FALSE	canonical	3	13	junction_7	25.4170679613129	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTCTGCCTACCTCTTT	72813457	True	NA	15	True	NA	NA	NA	72814366	72829635	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_72814564_72816727_72816828_72817755_72817856_72821667_72821742_72822043_72822296_72822477_72822544_72822847_72822962_72824059_72824843_72825301_72825408_72826172_72826244_72826517_72826590_72826702_72826824_72827187_72827294_72828358_72828509_72828728_72828777_72828882_72828985_72829302
transcript_38083.nic	chr11	+	2102	17	NIC	ENSG00000168010.11	novel	2140	18	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_3	23.9321958875486	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTCTGCCTACCTCTTT	72813476	True	NA	15	True	NA	NA	NA	72814385	72829635	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_72814564_72816727_72816828_72817755_72817856_72821667_72821742_72822043_72822296_72822477_72822544_72822847_72822962_72824733_72824843_72825301_72825408_72826172_72826244_72826517_72826590_72826702_72826824_72827187_72827294_72828358_72828509_72828728_72828777_72828882_72828985_72829302
transcript_38091.known	chr11	+	3841	16	FSM	ENSG00000168010.11	ENST00000439504.6	3841	16	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	22.4226076390177	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTCTGCCTACCTCTTT	72813509	True	NA	15	True	NA	NA	NA	72814418	72829635	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_72814564_72816727_72816828_72817755_72817856_72821667_72821742_72822043_72822296_72822477_72822544_72822847_72824843_72825301_72825408_72826172_72826244_72826517_72826590_72826702_72826824_72827187_72827294_72828358_72828509_72828728_72828777_72828882_72828985_72829302
transcript_381.nic	chr1	-	1901	11	NIC	ENSG00000131591.18	novel	2010	11	NA	NA	-9	0	intron_retention	FALSE	canonical	2	3	junction_10	20.0489401216124	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGTTCCGAGCTGCTCT	-1115113	True	NA	-11	True	TATAAA	-16	NA	1116104	1081822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_1082988_1084352_1084384_1084480_1084507_1085877_1086013_1087138_1087205_1087501_1087598_1090352_1090429_1091471_1091566_1091990_1092104_1115021_1115076_1116059
transcript_38110.known	chr11	+	1575	13	FSM	ENSG00000168010.11	ENST00000541367.5	1575	13	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	26.4799452416352	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTAGAAAAAAATGATATCT	72822130	True	NA	-8	True	NA	NA	NA	72822340	72829612	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_72822544_72822847_72822962_72824059_72824123_72824733_72824843_72825301_72825408_72826172_72826244_72826517_72826590_72826702_72826824_72827187_72827294_72828358_72828509_72828728_72828777_72828882_72828985_72829302
transcript_38112.known	chr11	+	1400	12	FSM	ENSG00000168010.11	ENST00000540222.5	1400	12	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	19.3506144861535	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTTCTCCCAAAGTAGA	72822228	True	NA	-22	True	NA	NA	NA	72822438	72829598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_72822544_72822847_72822962_72824733_72824843_72825301_72825408_72826172_72826244_72826517_72826590_72826702_72826824_72827187_72827294_72828358_72828509_72828728_72828777_72828882_72828985_72829302
transcript_38120.known	chr11	+	8619	3	FSM	ENSG00000175591.12	ENST00000393597.7	8619	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	3.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCCTGGCAGGTACCAAG	73218255	True	NA	NA	False	NA	NA	NA	73218280	73242427	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_73218433_73227980_73228176_73234155
transcript_38121.known	chr11	+	2174	3	FSM	ENSG00000175591.12	ENST00000393596.2	2174	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGCCCTATTGTGTGGT	73218431	False	NA	NA	False	ACTAAA	-19	NA	73218456	73235934	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_73218657_73227980_73228176_73234155
transcript_38122.known	chr11	+	8163	21	FSM	ENSG00000110237.5	ENST00000263674.4	8163	21	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_19	3.17175030543074	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTGAGAGCTTCTGAGT	73307953	True	NA	88	True	NA	NA	NA	73308275	73369388	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_73311831_73346882_73346961_73352829_73353013_73355532_73355650_73355860_73355954_73356174_73356352_73356708_73356760_73357024_73357135_73357241_73357328_73359833_73359953_73360319_73360534_73361087_73361162_73362039_73362240_73362432_73362735_73363205_73363456_73363746_73363834_73364171_73364240_73364451_73364601_73365389_73365565_73365677_73365948_73367583
transcript_38123.known	chr11	+	4962	21	FSM	ENSG00000110237.5	ENST00000643371.1	4962	21	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5.06828373317832	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTGAGAGCTTCTGAGT	73342903	True	NA	88	True	NA	NA	NA	73342923	73369388	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_73343278_73346882_73346961_73352829_73353013_73355532_73355650_73355860_73355954_73356174_73356352_73356708_73356760_73357024_73357135_73357241_73357328_73359833_73359953_73360319_73360534_73361087_73361162_73362039_73362240_73362432_73362735_73363205_73363456_73363746_73363834_73364171_73364240_73364451_73364601_73365389_73365565_73365677_73365948_73367583
transcript_38126.known	chr11	+	579	2	FSM	ENSG00000110237.5	ENST00000544519.1	579	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGCTGTTCTTCCACGT	73311541	False	NA	NA	False	NA	NA	NA	73311564	73347195	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_73311831_73346882
transcript_38128.known	chr11	+	3402	11	FSM	ENSG00000054967.13	ENST00000064780.7	3402	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	5.40740233383831	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTTTTTGCTTTTTTCTT	73375967	True	NA	NA	False	CATAAA	-18	NA	73376398	73397474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_73376500_73389111_73389182_73390550_73390626_73390754_73390922_73391143_73391224_73392210_73392469_73393836_73393918_73394235_73394318_73394476_73394735_73395086_73395286_73395443
transcript_38131.nnic	chr11	+	2396	10	NIC	ENSG00000054967.13	novel	3402	11	NA	NA	-86	0	intron_retention	FALSE	canonical	1	1	junction_5	10.6562449087639	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCACGAGGAGCTCCTTTT	73375881	True	NA	8	True	AATAAA	-15	NA	73376312	73396640	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_73376500_73389111_73389182_73390550_73390626_73390754_73390922_73391143_73391224_73393836_73393918_73394235_73394318_73394476_73394735_73395086_73395286_73395443
transcript_38133.nic	chr11	+	2316	9	NIC	ENSG00000054967.13	novel	3402	11	NA	NA	-86	0	intron_retention	FALSE	canonical	1	2	junction_4	10.9936060962725	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCACGAGGAGCTCCTTTT	73375881	True	NA	8	True	AATAAA	-15	NA	73376312	73396640	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_73376500_73389111_73389182_73390550_73390626_73390754_73390922_73393836_73393918_73394235_73394318_73394476_73394735_73395086_73395286_73395443
transcript_38136.known	chr11	+	1977	8	FSM	ENSG00000021300.14	ENST00000354190.10	1977	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	35.5142972072157	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGCTTGCTTTGTTCCC	73646555	True	NA	19	True	AATAAA	-24	NA	73646580	73662819	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_73646627_73649011_73649088_73650552_73650706_73651787_73651891_73652974_73653015_73655802_73655908_73660752_73660853_73661465
transcript_38137.known	chr11	+	2275	7	FSM	ENSG00000021300.14	ENST00000398492.8	2275	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	25.2877880057197	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGCTTGCTTTGTTCCC	NA	False	NA	19	True	AATAAA	-24	NA	73646177	73662819	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_73646627_73649011_73649088_73650552_73650706_73651787_73651891_73652974_73653015_73660752_73660853_73661465
transcript_38138.known	chr11	+	2016	7	FSM	ENSG00000021300.14	ENST00000227214.10	2016	7	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_6	6.42910050732864	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGCTTGCTTTGTTCCC	73647523	False	NA	19	True	AATAAA	-24	NA	73647548	73662819	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_73647739_73649011_73649088_73650552_73650706_73651787_73651891_73652974_73653015_73660752_73660853_73661465
transcript_3814.known	chr1	+	6515	8	FSM	ENSG00000169914.6	ENST00000375120.4	6515	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	5.30306034093445	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTAAGTTGTTTTTATCA	19879233	True	NA	NA	False	AATAAA	-19	NA	19882394	19912945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_19882735_19890384_19890534_19894367_19894481_19897539_19897663_19904266_19904399_19904890_19904988_19906431_19906617_19907569
transcript_38142.known	chr11	-	3326	8	FSM	ENSG00000175582.20	ENST00000336083.8	3326	8	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_5	155.462181240064	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGACCTGGTTTCCCAT	-73753628	True	NA	NA	False	AATAAA	-17	NA	73761074	73675637	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_73677963_73679653_73679721_73707419_73707514_73716250_73716363_73718612_73718719_73720845_73720900_73730764_73730824_73760565
transcript_38143.known	chr11	-	3389	8	FSM	ENSG00000175582.20	ENST00000310653.10	3389	8	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_5	113.069962087774	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGACCTGGTTTCCCAT	-73753691	True	NA	NA	False	AATAAA	-17	NA	73761137	73675637	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_73677963_73679653_73679721_73707419_73707514_73716250_73716363_73718784_73718891_73720845_73720900_73730764_73730824_73760565
transcript_38149.known	chr11	-	758	5	FSM	ENSG00000175582.20	ENST00000541588.5	758	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	256.161570107618	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTCATCTTCAACCTTC	-73753628	True	NA	NA	False	NA	NA	NA	73761074	73677893	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_73677963_73679653_73679721_73720845_73720900_73730764_73730824_73760565
transcript_38152.known	chr11	-	699	4	FSM	ENSG00000175582.20	ENST00000540771.5	699	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	276.254713383621	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCCTCAGGAGCAACCAG	-73753673	True	NA	NA	False	CATAAA	-7	NA	73761119	73677943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_73677963_73679653_73679721_73730764_73730824_73760565
transcript_38155.known	chr11	-	1812	2	FSM	ENSG00000175582.20	ENST00000541795.1	1812	2	0	0	0	0	multi-exon	FALSE	canonical	3	565	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTCAAGTTCTGAAATCAG	-73753571	True	NA	NA	False	GATAAA	-44	NA	73761017	73729463	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_73730824_73760565
transcript_38158.known	chr11	+	1004	9	FSM	ENSG00000175581.14	ENST00000540162.5	1004	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	173.563208947058	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGGCTGTACTTGCCA	73784523	True	NA	-72	True	NA	NA	NA	73787876	73864515	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_73787993_73805026_73805080_73808312_73808351_73817822_73817948_73825707_73825797_73844806_73844977_73859906_73860010_73863171_73863262_73864295
transcript_38162.known	chr11	+	1500	8	FSM	ENSG00000175581.14	ENST00000310614.12	1500	8	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_3	29.2498037670027	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCCCACTACTCAGGAGG	73784520	True	NA	NA	False	NA	NA	NA	73787873	73865133	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_73787993_73805026_73805080_73808312_73808351_73825707_73825797_73844806_73844977_73859906_73860010_73863171_73863262_73864295
transcript_38170.known	chr11	+	742	7	FSM	ENSG00000175581.14	ENST00000544819.5	742	7	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_2	130.561607424745	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTACTGGGTAGTTAGAGT	73784531	True	NA	NA	False	NA	NA	NA	73787884	73864424	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_73787993_73805026_73805080_73825707_73825797_73844806_73844977_73859906_73860010_73863171_73863262_73864295
transcript_38172.known	chr11	+	661	6	FSM	ENSG00000175581.14	ENST00000542303.5	661	6	0	0	0	0	multi-exon	FALSE	canonical	2	28	junction_4	153.462699050942	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATGTATGTGTGTGTGA	73784555	True	NA	15	True	AATAAA	-17	NA	73787908	73864602	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_73787993_73805026_73805080_73808312_73808351_73825707_73825797_73863171_73863262_73864295
transcript_38183.known	chr11	+	1612	13	FSM	ENSG00000175575.13	ENST00000544552.5	1612	13	0	0	0	0	multi-exon	FALSE	canonical	1	24	junction_1	273.309488289172	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTTAAATACTCTTACT	73871659	True	NA	34	True	AATAAA	-35	NA	73877027	73927745	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_73877069_73878782_73878820_73887039_73887100_73887353_73887458_73891111_73891202_73899145_73899245_73900269_73900421_73909398_73909594_73914412_73914505_73916544_73916661_73918949_73919033_73924614_73924698_73927284
transcript_38192.known	chr11	+	4954	12	FSM	ENSG00000175575.13	ENST00000310571.8	4954	12	0	0	0	0	multi-exon	FALSE	canonical	1	87	junction_8	164.383144457752	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGATAAGGAGGGATATGG	73871630	True	NA	NA	False	ATTAAA	-18	NA	73876998	73931114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_73877069_73878778_73878820_73887353_73887458_73891111_73891202_73899145_73899245_73900269_73900421_73909398_73909594_73914412_73914505_73916544_73916661_73918949_73919033_73924614_73924698_73927284
transcript_38196.known	chr11	-	582	3	FSM	ENSG00000181924.7	ENST00000537289.1	582	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	4.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGGAGTTGAGAGCCAT	-73862029	True	NA	NA	False	AAAACA	-16	NA	73876843	73872996	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_73873395_73876478_73876576_73876756
transcript_38198.known	chr11	-	818	2	FSM	ENSG00000181924.7	ENST00000355693.5	818	2	0	0	0	0	multi-exon	FALSE	canonical	3	632	junction_1	0	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTTTTCTTTTGTTTTT	-73862032	True	NA	-1	True	AATAAA	-22	NA	73876846	73872666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_73873395_73876756
transcript_3820.known	chr1	-	813	5	FSM	ENSG00000188257.12	ENST00000649436.1	813	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	7.82623792124926	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTGTGTATGCATT	-19979491	True	NA	1	True	AATAAA	-20	NA	19979621	19975430	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_19975844_19978014_19978122_19978379_19978485_19978733_19978880_19979579
transcript_38200.known	chr11	+	2020	2	FSM	ENSG00000175575.13	ENST00000381783.4	2020	2	0	0	0	0	multi-exon	FALSE	canonical	3	669	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGCCAGG	73871605	True	NA	NA	False	NA	NA	NA	73876973	73880703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_73877069_73878778
transcript_38201.known	chr11	-	1644	8	FSM	ENSG00000175567.11	ENST00000663595.2	1644	8	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_4	27.0856540083717	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTCTCCTCCCTCTCTTGT	-73980556	True	NA	-32	True	CATAAA	-16	NA	73982843	73974671	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_73975122_73975490_73975672_73976640_73976743_73976822_73977018_73977885_73978097_73978252_73978478_73981475_73981633_73982720
transcript_38205.known	chr11	-	7939	33	FSM	ENSG00000168014.18	ENST00000334126.12	7939	33	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_18	9.86466033056891	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGCACAAGTGTTTCGC	-74170960	False	NA	-7	True	AATAAA	-20	NA	74171002	74012717	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_74013526_74028286_74028399_74033350_74034279_74037477_74037699_74042053_74042219_74048204_74048339_74049336_74049543_74054606_74054672_74057405_74057545_74074252_74074601_74078114_74078718_74084880_74084971_74085617_74085887_74090812_74090937_74092415_74092589_74093815_74094000_74095227_74095409_74098008_74098256_74100524_74100677_74103130_74103626_74106370_74106494_74109033_74109153_74113779_74113893_74114383_74114594_74118227_74118383_74122987_74123136_74132843_74132973_74133424_74133558_74138719_74138968_74139604_74139829_74161398_74161557_74168343_74168614_74170737
transcript_38208.nnic	chr11	-	2627	8	NNC	ENSG00000168014.18	novel	3216	8	NA	NA	0	35	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	15.556349186104	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATAAAATGTATCAAACA	-74170977	False	NA	-23	True	AATAAA	-20	NA	74171019	74128542	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_74129726_74132843_74132973_74133424_74133558_74138719_74138968_74139604_74139829_74161398_74161557_74168343_74168614_74170737
transcript_38209.known	chr11	-	2640	8	FSM	ENSG00000168014.18	ENST00000539061.6	2640	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	16.23676855354	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAATGATCAATAAAAAAT	-74168552	True	NA	-58	True	NA	NA	NA	74171000	74128577	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_74129793_74132843_74132973_74133424_74133558_74138719_74138968_74139604_74139829_74161398_74161557_74168343_74168614_74170737
transcript_3821.known	chr1	-	608	5	FSM	ENSG00000188257.12	ENST00000482011.2	608	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	2.27760839478607	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGCTGAATTTCCCTCTC	-19979488	True	NA	NA	False	NA	NA	NA	19979618	19975672	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_19975844_19978014_19978122_19978379_19978525_19978733_19978880_19979579
transcript_38214.known	chr11	-	936	4	FSM	ENSG00000168014.18	ENST00000541922.2	936	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	18.8325958557674	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTAGAGTTTCTTATATA	-74168429	True	NA	NA	False	ATTAAA	-23	NA	74170877	74158326	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_74158695_74161398_74161557_74168343_74168614_74170737
transcript_38215.known	chr11	-	2587	11	FSM	ENSG00000168014.18	ENST00000415191.6	2587	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	10.870142593361	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTTGTGACTACTGTCT	-74168509	True	NA	NA	False	TATAAA	-19	NA	74170957	74113200	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_74113893_74114383_74114594_74118227_74118383_74122987_74123136_74132843_74132973_74133424_74133558_74138719_74138968_74139604_74139829_74161398_74161557_74168343_74168614_74170737
transcript_38221.known	chr11	+	2496	14	FSM	ENSG00000214517.10	ENST00000398427.6	2496	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	108.76357291345	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTCTGGTCTTTCTCTGT	74166224	True	NA	20	True	AATAAA	-17	NA	74171321	74254703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_74171523_74203727_74203822_74204352_74204446_74222311_74222370_74225204_74225257_74230244_74230400_74230911_74231003_74235900_74235967_74239132_74239257_74246033_74246206_74247078_74247124_74250953_74251019_74251647_74251716_74253491
transcript_38222.known	chr11	+	2487	14	FSM	ENSG00000214517.10	ENST00000328257.13	2487	14	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_13	27.9378007376954	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTCTGGTCTTTCTCTGT	74166191	True	NA	20	True	AATAAA	-17	NA	74171288	74254703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_74171523_74203727_74203822_74204352_74204446_74222311_74222370_74225204_74225257_74230244_74230400_74230911_74231003_74235900_74235967_74239132_74239257_74246075_74246206_74247078_74247124_74250953_74251019_74251647_74251716_74253491
transcript_38229.known	chr11	-	2255	13	FSM	ENSG00000149380.12	ENST00000331597.9	2255	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.372677996249965	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCCCAACTGAGAATAT	-74311623	True	NA	NA	False	ATTAAA	-16	NA	74311640	74266656	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_74267319_74268144_74268242_74269651_74269721_74273544_74273608_74276984_74277145_74279387_74279453_74285808_74285986_74286227_74286392_74289078_74289131_74298211_74298362_74302368_74302593_74304269_74304413_74311411
transcript_3823.known	chr1	+	5562	2	FSM	ENSG00000162543.6	ENST00000375099.4	5562	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGCTCACCTCGTGTTT	20185964	True	NA	NA	False	AATAAA	-19	NA	20186095	20196050	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_20186154_20190546
transcript_38233.known	chr11	-	8477	14	FSM	ENSG00000165434.8	ENST00000298198.5	8477	14	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_7	12.934976206683	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGTTTCTGTGTAATTT	-74396499	True	NA	-5	True	AATAAA	-17	NA	74398433	74330315	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_74336755_74338467_74338602_74342460_74342651_74342884_74343015_74343322_74343417_74345468_74345650_74346731_74346830_74347147_74347338_74351382_74351577_74368491_74368576_74370901_74370987_74371710_74371818_74374414_74374583_74398050
transcript_38241.known	chr11	-	3064	3	FSM	ENSG00000175538.11	ENST00000310128.9	3064	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	2	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGGTGTAAGAATGAATGG	-74467346	True	NA	NA	False	AATAAA	-14	NA	74467549	74454840	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_74457604_74461954_74462104_74467397
transcript_38242.known	chr11	-	663	1	FSM	ENSG00000165434.8	ENST00000622957.1	663	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCATCATTGTAAGTTAT	-74396474	True	NA	NA	False	NA	NA	NA	74398408	74397745	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_74397700_74398400
transcript_38243.known	chr11	+	3788	12	FSM	ENSG00000077514.9	ENST00000263681.7	3788	12	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_8	29.8068160156655	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAGTGTATGTAGCATGA	74588883	True	NA	NA	False	AATAAA	-35	NA	74592581	74643076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_74592719_74594060_74594117_74604691_74604795_74611498_74611539_74612877_74613011_74618536_74618805_74620016_74620090_74625407_74625574_74629216_74629324_74634582_74634696_74636196_74636276_74640563
transcript_38245.known	chr11	+	1700	11	FSM	ENSG00000077514.9	ENST00000532497.5	1700	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	81.8733167765909	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATATGGCACAGGAATTAT	74588906	True	NA	NA	False	NA	NA	NA	74592604	74641114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_74592719_74594060_74594117_74611498_74611539_74612877_74613011_74618536_74618805_74620016_74620090_74625407_74625574_74629216_74629324_74634582_74634696_74636196_74636276_74640563
transcript_38249.nic	chr11	+	911	8	ISM	ENSG00000077514.9	ENST00000263681.7	3788	12	-50	17618	-24	6688	5prime_fragment	FALSE	canonical	3	232	junction_6	23.3998081275929	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGGAGCAGCCTACAGTG	74588833	True	NA	NA	False	AAGAAA	-4	NA	74592531	74625458	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_74592719_74594060_74594117_74604691_74604795_74611498_74611539_74612877_74613011_74618536_74618805_74620016_74620090_74625407
transcript_38250.nic	chr11	+	1025	8	ISM	ENSG00000077514.9	ENST00000263681.7	3788	12	-50	17504	-24	6802	5prime_fragment	FALSE	canonical	3	232	junction_6	23.3998081275929	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGGAAAATTTTGTTGCT	74588833	True	NA	NA	False	AAAAAG	-37	NA	74592531	74625572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_74592719_74594060_74594117_74604691_74604795_74611498_74611539_74612877_74613011_74618536_74618805_74620016_74620090_74625407
transcript_38253.known	chr11	+	2493	2	FSM	ENSG00000254837.2	ENST00000526036.1	2493	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTATCCTCAAGCTATCTC	74493031	True	NA	NA	False	TATAAA	-42	NA	74493365	74498533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_74493974_74496648
transcript_38257.known	chr11	-	769	2	FSM	ENSG00000175536.7	ENST00000527115.1	769	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAAGGTGATGTGATGTA	-74492262	False	NA	55	True	NA	NA	NA	74493315	74491711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_74492365_74493199
transcript_38258.known	chr11	-	2333	2	FSM	ENSG00000175536.7	ENST00000310109.5	2333	2	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATGTTTTCTTGAGAT	-74492671	True	NA	-25	True	TATAAA	-19	NA	74493724	74490518	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_74492365_74493237
transcript_38262.known	chr11	-	399	1	FSM	ENSG00000227615.1	ENST00000428553.1	399	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATAAATCTTTGGCTCA	-74746099	False	NA	NA	False	AAGAAA	-4	NA	74746114	74745715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_74745700_74746100
transcript_38297.known	chr11	+	839	6	FSM	ENSG00000118363.13	ENST00000532972.5	839	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1164.78712218156	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGCTTGGGGGGTGGGGG	74920190	True	NA	NA	False	NA	NA	NA	74949264	74977087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_74949400_74963594_74963688_74965033_74965118_74965762_74965924_74969564_74969700_74976856
transcript_38298.known	chr11	+	2691	5	FSM	ENSG00000118363.13	ENST00000263672.11	2691	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1131.24378451331	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGCTCACGCCTTTAAT	74920191	True	NA	NA	False	ATTAAA	-21	NA	74949265	74979033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_74949400_74965033_74965118_74965762_74965924_74969564_74969700_74976856
transcript_3830.known	chr1	-	2428	4	FSM	ENSG00000090432.7	ENST00000264198.5	2428	4	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_2	17.4547032821147	1054	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTAGCCTGTTGCTTTGT	-20505416	True	NA	-1	True	ATTAAA	-15	NA	20508151	20499447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_20501420_20502068_20502190_20503221_20503310_20507904
transcript_38301.known	chr11	+	612	4	FSM	ENSG00000118363.13	ENST00000530257.5	612	4	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_2	1170.27356725777	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTCCTGAAATTTTA	74920186	True	NA	NA	False	GATAAA	-43	NA	74949260	74977156	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_74949400_74965033_74965118_74969610_74969700_74976856
transcript_38303.known	chr11	+	772	4	FSM	ENSG00000118363.13	ENST00000526361.1	772	4	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_2	1155.79131142069	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTATAGCTTTGGGCCAT	74920189	True	NA	NA	False	NA	NA	NA	74949263	74977348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_74949400_74965033_74965118_74969639_74969700_74976856
transcript_38304.known	chr11	+	321	2	FSM	ENSG00000118363.13	ENST00000527225.1	321	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCCTCTTTCTCCTGGAT	74920204	True	NA	NA	False	AATAAA	-18	NA	74949278	74977056	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_74949400_74976856
transcript_38305.known	chr11	+	2468	4	FSM	ENSG00000162139.10	ENST00000531509.5	2468	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	9.56846672960488	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATCATGAAGTCTCCTA	NA	False	NA	NA	False	AAAACA	-2	NA	74988278	75007084	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_74988726_74989017_74989155_74994508_74994721_75005412
transcript_38308.known	chr11	+	5929	3	FSM	ENSG00000162139.10	ENST00000294064.9	5929	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	2	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTTTTTTTTTTCTTA	74987347	True	NA	18	True	AATAAA	-18	NA	74988932	75010907	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_74989155_74994508_74994721_75005412
transcript_38310.known	chr11	+	746	2	FSM	ENSG00000162139.10	ENST00000534628.1	746	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTCCAGAGACCTCCACA	74987358	True	NA	NA	False	AATAAA	-31	NA	74988943	74995043	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_74989155_74994508
transcript_38311.known	chr11	+	2931	1	FSM	ENSG00000261594.4	ENST00000562197.3	2931	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGTTAGTGGTGCCGTA	75240758	True	NA	11	True	TATAAA	-26	NA	75240773	75243704	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_75240800_75243700
transcript_38315.known	chr11	-	7352	16	FSM	ENSG00000137486.17	ENST00000420843.7	7352	16	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	51.4321127528534	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGCTGTGCTTTCATTT	-75347841	True	NA	-1	True	AATAAA	-35	NA	75351661	75260121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_75266275_75267651_75267704_75268888_75268960_75271700_75271725_75272894_75272979_75274073_75274212_75276838_75276912_75277363_75277449_75278608_75278745_75281074_75281143_75281961_75282022_75283286_75283484_75284234_75284280_75287314_75287376_75290008_75290040_75351587
transcript_3832.known	chr1	+	2448	1	FSM	ENSG00000183114.8	ENST00000332947.6	2448	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTGTTGTGTTTAATG	20552322	True	NA	20	True	AATAAA	-30	NA	20552572	20555020	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_20552600_20555000
transcript_38329.known	chr11	-	1895	15	FSM	ENSG00000137486.17	ENST00000360025.7	1895	15	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_3	25.2881354773018	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTCTGTGTCTGATAGT	-75347885	True	NA	2	True	NA	NA	NA	75351705	75265598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_75266275_75267651_75267704_75268888_75268960_75272894_75272979_75274073_75274212_75276838_75276912_75277363_75277449_75278608_75278745_75281074_75281143_75281961_75282022_75283286_75283484_75284234_75284280_75287314_75287376_75290008_75290040_75351587
transcript_3833.known	chr1	+	809	4	FSM	ENSG00000158825.6	ENST00000375071.4	809	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	14.1656862405839	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGCGTGTGTCTTGCTC	20587400	True	NA	14	True	TATAAA	-20	NA	20589096	20618903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_20589284_20604927_20605040_20613841_20613900_20618451
transcript_3834.known	chr1	+	762	3	FSM	ENSG00000158825.6	ENST00000461985.1	762	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	33.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGCGTGTGTCTTGCTC	20587389	True	NA	14	True	TATAAA	-20	NA	20589085	20618903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_20589284_20604927_20605040_20618451
transcript_38346.known	chr11	-	2338	1	FSM	ENSG00000279117.1	ENST00000624624.1	2338	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGATGCTGGCTGTGCT	-75262456	False	NA	-8	True	AATAAA	-28	NA	75262466	75260128	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_75260100_75262500
transcript_38349.known	chr11	+	796	7	FSM	ENSG00000149273.15	ENST00000530721.5	796	7	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_2	7753.57908037027	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGACTAGACTGTTCAG	75275785	True	NA	44	True	AATAAA	-20	NA	75399518	75405692	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_75399578_75400693_75400778_75401639_75401734_75402351_75402447_75404019_75404208_75404671_75404869_75405613
transcript_38353.known	chr11	+	2059	7	FSM	ENSG00000149273.15	ENST00000531188.6	2059	7	0	0	0	0	multi-exon	FALSE	canonical	3	11487	junction_6	3654.23227991264	8289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTAAGGATGTGCCTAGGT	75275784	True	NA	12	True	ATTAAA	-23	NA	75399517	75406907	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75402351_75402447_75404019_75404208_75404671_75404869_75405613
transcript_38354.known	chr11	+	1306	7	FSM	ENSG00000149273.15	ENST00000527446.5	1306	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	7818.27426965539	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATTTCTGTTGTCTATA	75275797	True	NA	NA	False	NA	NA	NA	75399530	75422280	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75402351_75402447_75404019_75404208_75404671_75404869_75421726
transcript_38359.known	chr11	+	564	6	FSM	ENSG00000149273.15	ENST00000534440.5	564	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	8408.96243302347	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAGACACAAGGTCTGAC	75275797	True	NA	32	True	AATAAA	-8	NA	75399530	75405680	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75402351_75402380_75404671_75404869_75405613
transcript_38361.known	chr11	+	866	6	FSM	ENSG00000149273.15	ENST00000524851.5	866	6	0	0	0	0	multi-exon	FALSE	canonical	3	19144	junction_1	1326.1771525705	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAGAATACAAGTTGAAAC	75275809	True	NA	NA	False	AATAAA	-24	NA	75399542	75404994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75402351_75402447_75404019_75404208_75404671
transcript_38364.known	chr11	+	737	6	FSM	ENSG00000149273.15	ENST00000532872.5	737	6	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_3	7902.9198047304	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGACTAGACTGTTCAG	75275796	True	NA	44	True	AATAAA	-20	NA	75399529	75405692	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75404019_75404208_75404671_75404869_75405613
transcript_38366.known	chr11	+	903	6	FSM	ENSG00000149273.15	ENST00000422465.6	903	6	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_1	8348.73916229271	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCCTGTAGTTCAGGAT	75275786	True	NA	-90	True	NA	NA	NA	75399519	75405884	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_75399578_75401639_75401734_75402351_75402447_75404019_75404208_75404671_75404869_75405613
transcript_3837.known	chr1	-	1941	11	FSM	ENSG00000244038.11	ENST00000602624.7	1941	11	0	0	0	0	multi-exon	FALSE	canonical	3	3524	junction_4	190.042863586087	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCACCTGGCCCCGGTCCT	-20625590	True	NA	-4	True	AATAAA	-42	NA	20661369	20651776	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_20652529_20652620_20652728_20652850_20652972_20653626_20653775_20654222_20654372_20654613_20654708_20655439_20655535_20655675_20655780_20656100_20656188_20660880_20660992_20661196
transcript_38371.known	chr11	+	473	5	FSM	ENSG00000149273.15	ENST00000528439.5	473	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	8216.37695398647	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGACTAGACTGTTCAG	75275784	True	NA	44	True	AATAAA	-20	NA	75399517	75405692	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75404759_75404869_75405613
transcript_38372.known	chr11	+	1373	5	FSM	ENSG00000149273.15	ENST00000529173.5	1373	5	0	0	0	0	multi-exon	FALSE	canonical	3	19144	junction_1	697.654821527093	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGCATAACAGGTATGTC	75275781	True	NA	NA	False	NA	NA	NA	75399514	75404855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_75399578_75400693_75400825_75401639_75402447_75404019_75404208_75404671
transcript_38380.known	chr11	-	1500	6	FSM	ENSG00000149243.17	ENST00000376292.8	1500	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.35646599662505	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGCTCCCTGTGTTTAC	NA	False	NA	NA	False	NA	NA	NA	75430191	75422393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_75422769_75423691_75423881_75425392_75425582_75426519_75426639_75428441_75428627_75429748
transcript_38381.known	chr11	-	3222	18	FSM	ENSG00000158555.15	ENST00000529721.5	3222	18	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_17	5.68735621895144	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTTGTCTCTGAATTG	-75490698	True	NA	-4	True	ATTAAA	-14	NA	75490751	75434639	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_75435656_75436935_75437049_75439878_75439962_75441162_75441311_75441645_75441804_75442362_75442582_75443135_75443287_75444412_75444496_75448976_75449123_75449516_75449611_75449884_75449984_75456756_75456817_75457692_75457787_75462785_75462890_75477618_75477796_75479243_75479489_75490236_75490321_75490603
transcript_38387.known	chr11	+	2299	6	FSM	ENSG00000149257.16	ENST00000533603.5	2299	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	943.74458409042	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTGGAGCGTGGAAGA	75562034	False	NA	26	True	AATAAA	-16	NA	75562055	75572783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_75562320_75563726_75563771_75566315_75566972_75568730_75568830_75568938_75569172_75571780
transcript_384.nic	chr1	-	2283	10	NIC	ENSG00000131591.18	novel	2010	11	NA	NA	-7	0	intron_retention	FALSE	canonical	3	8	junction_1	16.5021510008338	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGTTCCGAGCTGCTCT	-1115111	True	NA	-11	True	TATAAA	-16	NA	1116102	1081822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_1082988_1083914_1084384_1084480_1084507_1085877_1086013_1087138_1087205_1087501_1087598_1090352_1090429_1091471_1091566_1091990_1092104_1116059
transcript_38405.known	chr11	+	1268	6	FSM	ENSG00000149257.16	ENST00000533449.6	1268	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	947.334238798535	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGCGAGGAGCTGCGCAGC	75562785	False	NA	NA	False	NA	NA	NA	75562808	75571940	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_75562885_75563726_75563771_75566315_75566972_75568730_75568830_75568938_75569172_75571780
transcript_38413.known	chr11	+	2058	5	FSM	ENSG00000149257.16	ENST00000358171.8	2058	5	0	0	0	0	multi-exon	FALSE	canonical	3	1821	junction_4	136.844802604995	10012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTGGAGCGTGGAAGA	75515548	True	NA	26	True	AATAAA	-16	NA	75562252	75572783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_75562320_75566315_75566972_75568730_75568830_75568938_75569172_75571780
transcript_38426.known	chr11	+	882	4	FSM	ENSG00000149257.16	ENST00000526397.5	882	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	981.666044142417	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAAGCTGCAAATCGTGG	75515538	True	NA	NA	False	NA	NA	NA	75562242	75568966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_75562342_75566315_75566972_75568730_75568830_75568938
transcript_38427.known	chr11	+	3391	5	FSM	ENSG00000149257.16	ENST00000524558.5	3391	5	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	811.389972516299	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTTGGAGCGTGGAAG	75562358	True	NA	25	True	AATAAA	-15	NA	75562369	75572782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_75563771_75566315_75566972_75568730_75568830_75568938_75569172_75571780
transcript_38428.known	chr11	-	4329	3	FSM	ENSG00000171533.12	ENST00000434603.2	4329	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTTGATCTTATTTCCT	-75668421	False	NA	1	True	AATAAA	-19	NA	75668434	75602859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_75606005_75608108_75608323_75667464
transcript_38430.known	chr11	+	651	2	FSM	ENSG00000255326.1	ENST00000527803.1	651	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAAACACATGGCTGGTG	75583166	True	NA	NA	False	NA	NA	NA	75583195	75594665	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_75583282_75594100
transcript_38432.known	chr11	+	2407	8	FSM	ENSG00000062282.15	ENST00000228027.12	2407	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	6.0676458804558	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTTATTGCTGGGGCT	75768602	True	NA	8	True	AATAAA	-18	NA	75768777	75801534	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_75769113_75784617_75784747_75790187_75790296_75790660_75790732_75796327_75796533_75797157_75797333_75798226_75798430_75800353
transcript_38438.known	chr11	+	5117	15	FSM	ENSG00000198382.9	ENST00000356136.8	5117	15	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_7	12.3373086073693	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGAGAGTTAAAAGTGTA	75813748	True	NA	3	True	AATAAA	-16	NA	75815209	76144232	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_75815525_75851882_75852001_75861745_75861781_75879878_75880041_75888828_75888904_75911953_75912040_75961443_75961550_75983386_75983514_76004004_76004090_76007533_76007622_76008806_76008868_76016814_76016981_76065709_76065789_76115923_76116016_76140710
transcript_38444.known	chr11	+	3152	9	FSM	ENSG00000198382.9	ENST00000531818.5	3152	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	26.9835019039412	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGACCTGATTTTTTTTTA	75979000	True	NA	2	True	AATAAA	-17	NA	75979525	76142651	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_75980039_75983386_75983514_76004004_76004090_76007533_76007622_76008806_76008868_76016814_76016981_76065709_76065789_76115923_76116016_76140710
transcript_38446.nic	chr11	+	868	7	ISM	ENSG00000198382.9	ENST00000356136.8	5117	15	-24	182736	-24	-53	5prime_fragment	FALSE	canonical	3	62	junction_2	9.67384790728763	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGGAAAGGAAATTGAAGAA	75813724	True	NA	7	True	ATTAAA	-26	NA	75815185	75961496	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_75815525_75851882_75852001_75861745_75861781_75879878_75880041_75888828_75888904_75911953_75912040_75961443
transcript_38447.nic	chr11	+	918	7	ISM	ENSG00000198382.9	ENST00000356136.8	5117	15	-21	182683	-21	0	5prime_fragment	FALSE	canonical	3	62	junction_2	9.67384790728763	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTTTTTATGTATTTAC	75813727	True	NA	60	True	AAGAAA	-33	NA	75815188	75961549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_75815525_75851882_75852001_75861745_75861781_75879878_75880041_75888828_75888904_75911953_75912040_75961443
transcript_38451.known	chr11	-	882	6	FSM	ENSG00000137492.9	ENST00000528993.5	882	6	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_4	64.6510634096609	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGGTTTGAGACAACAGCA	-76378947	True	NA	NA	False	GATAAA	-24	NA	76380971	76352497	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_76352795_76355617_76355655_76360955_76361064_76364337_76364433_76365851_76365973_76380747
transcript_38452.known	chr11	-	3490	5	FSM	ENSG00000137492.9	ENST00000260045.8	3490	5	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_3	16.5132522538717	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTAGGCACATTATTTTTT	-76379108	True	NA	-10	True	AATAAA	-19	NA	76381132	76349955	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_76352795_76355617_76355655_76360955_76361064_76365851_76365973_76380747
transcript_38456.nic	chr11	-	657	3	ISM	ENSG00000137492.9	ENST00000684702.1	3443	5	-58	10910	-58	-8274	5prime_fragment	FALSE	canonical	3	158	junction_1	10.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGAATAAAAGAACTGGTATG	-76381156	False	34	NA	False	NA	NA	NA	76381190	76360970	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_76361064_76365851_76365973_76380747
transcript_38458.known	chr11	+	5444	2	FSM	ENSG00000179240.13	ENST00000529331.2	5444	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGTGTTTTACTGGGAG	76380724	True	NA	NA	False	ATTAAA	-21	NA	76381322	76408132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_76382294_76403659
transcript_38460.known	chr11	-	599	2	FSM	ENSG00000255135.5	ENST00000530759.1	599	2	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_1	0	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTGTTCCCCTTTGCTG	-76442058	True	NA	NA	False	AATAAA	-21	NA	76444574	76441337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_76441640_76444277
transcript_38461.known	chr11	-	738	2	FSM	ENSG00000255135.5	ENST00000572035.1	738	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTTTTTTAAAAAAGAAAT	-76442140	True	NA	NA	False	AATAAA	-5	NA	76444656	76441353	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_76441640_76444204
transcript_38465.known	chr11	+	5508	21	FSM	ENSG00000158636.16	ENST00000334736.7	5508	21	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	9.85025380383673	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACTGAAGATTTAAACACA	76442859	True	NA	-1	True	AATAAA	-15	NA	76445024	76551542	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_76445129_76446899_76447009_76451857_76451958_76453313_76453389_76458182_76458359_76459935_76460086_76463820_76464081_76472563_76472841_76496214_76496470_76513385_76513536_76516141_76516313_76523154_76523292_76526461_76526636_76528267_76528467_76535894_76536060_76537794_76537951_76539598_76539641_76542215_76542368_76544258_76544823_76545796_76546298_76549951
transcript_38470.nnic	chr11	+	4163	20	NIC	ENSG00000158636.16	novel	5508	21	NA	NA	-1	0	combination_of_known_splicesites	TRUE	canonical	3	10	junction_5	8.08747192984721	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATGAAAAAGAAA	76442855	True	NA	NA	False	GATAAA	-25	NA	76445020	76550343	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_76445129_76446899_76447009_76451857_76451958_76453313_76453389_76458182_76458359_76463820_76464081_76472563_76472841_76496214_76496470_76513385_76513536_76516141_76516313_76523154_76523292_76526461_76526636_76528267_76528467_76535894_76536060_76537794_76537951_76539598_76539641_76542215_76542368_76544258_76544823_76545796_76546298_76549951
transcript_38472.known	chr11	+	4015	19	FSM	ENSG00000158636.16	ENST00000524490.5	4015	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	11.4987922071069	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATGAAAAAGAAA	76442859	True	NA	NA	False	GATAAA	-25	NA	76445024	76550343	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_76445129_76446899_76447009_76451857_76451958_76453313_76453389_76458182_76458359_76459932_76460086_76463820_76464081_76472563_76472841_76513385_76513536_76516141_76516313_76523154_76523292_76526461_76526636_76528267_76528467_76535894_76536060_76537794_76537951_76542215_76542368_76544258_76544823_76545796_76546298_76549951
transcript_38477.known	chr11	-	4207	3	FSM	ENSG00000137507.11	ENST00000260061.9	4207	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGCTGCCAGCTTCCTC	-76670664	True	NA	NA	False	ATTAAA	-20	NA	76670747	76657523	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_76661509_76665870_76665959_76670613
transcript_38478.known	chr11	+	2585	2	FSM	ENSG00000182704.8	ENST00000333090.5	2585	2	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_1	0	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTTTACTCAGCCAGT	76780302	True	NA	28	True	AATAAA	-15	NA	76783355	76798144	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_76783405_76795608
transcript_38481.known	chr11	-	336	2	FSM	ENSG00000255100.1	ENST00000528075.1	336	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAAAGGG	-76782882	True	NA	NA	False	NA	NA	NA	76783062	76782580	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_76782857_76783002
transcript_38482.known	chr11	+	4509	12	FSM	ENSG00000078124.13	ENST00000679866.1	4509	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	30.7270037642882	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCTAACACAGTGAAACCC	76859437	True	NA	NA	False	NA	NA	NA	76860869	77023879	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_76861080_76926556_76926668_76958978_76959032_76976288_76976342_76985642_76985725_76990538_76990575_76998762_76998822_77011329_77011376_77015015_77015118_77016674_77016780_77019730_77019777_77020273
transcript_38483.known	chr11	+	4495	12	FSM	ENSG00000078124.13	ENST00000679754.1	4495	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	32.1080304571101	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCTAACACAGTGAAACCC	76859426	True	NA	NA	False	NA	NA	NA	76860858	77023879	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_76861080_76926556_76926668_76958978_76959032_76976288_76976342_76985642_76985725_76990538_76990575_76998762_76998822_77015015_77015118_77015638_77015660_77016674_77016780_77019730_77019777_77020273
transcript_38486.known	chr11	+	7333	11	FSM	ENSG00000078124.13	ENST00000532485.6	7333	11	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_3	7.87464284904401	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGGTAGTGTTTCATCC	76859485	True	NA	NA	False	ATTAAA	-26	NA	76860917	77026797	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_76861080_76926556_76926668_76958978_76959032_76976288_76976342_76985642_76985725_76990538_76990575_76998762_76998822_77015015_77015118_77016674_77016780_77019730_77019777_77020273
transcript_38493.known	chr11	+	4310	9	FSM	ENSG00000078124.13	ENST00000681354.1	4310	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	36.2870500316573	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCTAACACAGTGAAACCC	76859455	True	NA	NA	False	NA	NA	NA	76860887	77023879	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_76861080_76926556_76926668_76976288_76976342_76990538_76990575_76998762_76998822_77015015_77015118_77016674_77016780_77019730_77019777_77020273
transcript_38496.known	chr11	+	1695	6	FSM	ENSG00000078124.13	ENST00000530182.6	1695	6	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_3	6.01331855134916	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGTGACAGAATGAAACTC	76859502	True	NA	NA	False	NA	NA	NA	76860934	76991789	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_76861080_76926556_76926668_76958978_76959032_76976288_76976342_76985642_76985725_76990538
transcript_38498.known	chr11	+	4367	13	FSM	ENSG00000149260.18	ENST00000648180.1	4367	13	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_3	15.8473622060231	176	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTCCTGTGTCCCTCTG	77065459	True	NA	23	True	AATAAA	-20	NA	77066970	77126155	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_77067095_77084851_77085052_77093681_77093814_77112588_77112798_77114241_77114435_77115394_77115589_77116225_77116304_77118156_77118353_77119029_77119153_77120712_77120910_77121933_77122050_77122575_77122713_77123687
transcript_385.known	chr1	-	1832	10	FSM	ENSG00000131591.18	ENST00000421241.7	1832	10	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_9	11.8800590263321	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGTTCCGAGCTGCTCT	-1115098	True	NA	-11	True	TATAAA	-16	NA	1116089	1081822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1082988_1084352_1084384_1084480_1084507_1085877_1086013_1087138_1087205_1087501_1087598_1090352_1090429_1091471_1091566_1091990_1092104_1116059
transcript_38508.known	chr11	+	1849	11	FSM	ENSG00000137474.23	ENST00000409893.6	1849	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	2.4	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTTTCCCAGTGCATA	77174738	True	NA	NA	False	AATAAA	-29	NA	77174755	77184996	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_77174915_77175371_77175465_77177548_77177644_77179044_77179130_77179734_77179954_77180373_77180482_77181379_77181590_77181950_77182155_77182423_77182601_77183067_77183158_77184587
transcript_38514.known	chr11	-	2543	16	FSM	ENSG00000149269.10	ENST00000278568.8	2543	16	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	280.211221918197	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACAATTAATTCTTGACT	-77474046	False	NA	10	True	NA	NA	NA	77474060	77322947	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_77323361_77325327_77325377_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77473551
transcript_38519.nic	chr11	-	3243	16	NIC	ENSG00000149269.10	novel	2543	16	NA	NA	8	-5	combination_of_known_junctions	FALSE	canonical	3	124	junction_1	290.035553376172	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTATTGGAGTATGCCT	-77412046	False	NA	-14	True	AATAAA	-13	NA	77412056	77322021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_77323361_77325327_77325377_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77411773
transcript_38522.nic	chr11	-	2288	16	NIC	ENSG00000149269.10	novel	2543	16	NA	NA	37	0	combination_of_known_junctions	FALSE	canonical	3	124	junction_1	290.035553376172	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACAATTAATTCTTGACT	-77412017	False	NA	10	True	NA	NA	NA	77412027	77322947	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_77323361_77325327_77325377_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77411773
transcript_38526.known	chr11	-	3001	15	FSM	ENSG00000149269.10	ENST00000530617.5	3001	15	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	266.624056969925	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGAGTATGCCTTTCTT	-77412054	False	NA	-9	True	AATAAA	-18	NA	77412064	77322016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_77323155_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77411773
transcript_38530.nic	chr11	-	3414	15	NIC	ENSG00000149269.10	novel	3001	15	NA	NA	-207	0	combination_of_known_junctions	FALSE	canonical	3	325	junction_14	161.715673896111	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGAGTATGCCTTTCTT	-77412261	False	NA	-9	True	AATAAA	-18	NA	77412271	77322016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_77323361_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77411773
transcript_38532.known	chr11	-	3459	15	FSM	ENSG00000149269.10	ENST00000356341.8	3459	15	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_14	136.808838030536	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGAGTATGCCTTTCTT	-77474080	False	NA	-9	True	AATAAA	-18	NA	77474094	77322016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_77323361_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77473551
transcript_38535.nic	chr11	-	2312	15	NIC	ENSG00000149269.10	novel	3001	15	NA	NA	8	44	combination_of_known_junctions	FALSE	canonical	3	325	junction_14	161.715673896111	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCAATTTGTAATCAATT	-77412046	False	NA	-27	True	TATAAA	-18	NA	77412056	77322903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_77323361_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77411773
transcript_38539.nic	chr11	-	2215	15	NIC	ENSG00000149269.10	novel	3001	15	NA	NA	37	-24	combination_of_known_junctions	FALSE	canonical	3	325	junction_14	161.715673896111	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCACCTCCTTCATAACC	-77412017	False	NA	-14	True	AATAAA	-27	NA	77412027	77322971	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_77323361_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77411773
transcript_38559.nic	chr11	-	513	2	ISM	ENSG00000149269.10	ENST00000530617.5	3001	15	-11	70314	-11	0	5prime_fragment	FALSE	canonical	3	325	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATAGTATTTGATTTTCTT	-77412065	False	NA	NA	False	GATAAA	-2	NA	77412075	77392330	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_77392542_77411773
transcript_3856.known	chr1	+	2657	8	FSM	ENSG00000158828.8	ENST00000321556.5	2657	8	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_3	27.5251276665745	175	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTCTAGTTTTCTCTTC	20628961	True	NA	15	True	AGTAAA	-17	NA	20633457	20651511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_20633936_20637841_20638130_20639891_20639993_20644489_20644673_20645559_20645724_20648504_20648633_20648994_20649232_20650433
transcript_38561.nic	chr11	-	754	2	ISM	ENSG00000149269.10	ENST00000278568.8	2543	16	-34	69383	0	0	5prime_fragment	FALSE	canonical	3	436	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATAGTATTTGATTTTCTT	-77474080	False	NA	NA	False	GATAAA	-2	NA	77474094	77392330	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_77392542_77473551
transcript_38562.known	chr11	-	450	3	FSM	ENSG00000149269.10	ENST00000528633.1	450	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATAGTATTTGATTTTCTT	-77406952	True	NA	NA	False	GATAAA	-2	NA	77411933	77392330	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_77392542_77408153_77408233_77411773
transcript_38563.known	chr11	-	2982	7	FSM	ENSG00000074201.9	ENST00000525428.6	2982	7	0	0	0	0	multi-exon	FALSE	canonical	3	958	junction_5	36.1789533661032	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTGAAAATACAAAAATTAG	-77617925	True	NA	NA	False	NA	NA	NA	77637794	77614529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_77616696_77619605_77619696_77622499_77622674_77624962_77625071_77625716_77625819_77629762_77629900_77637589
transcript_38564.known	chr11	-	1121	6	FSM	ENSG00000074201.9	ENST00000525064.5	1121	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	392.652008781313	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTTGTAATAGCTTAACA	-77617903	True	NA	4	True	NA	NA	NA	77637772	77616194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_77616696_77619605_77619696_77624962_77625071_77625716_77625819_77629762_77629900_77637589
transcript_38566.known	chr11	+	1835	3	FSM	ENSG00000178301.4	ENST00000313578.4	1835	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTAGAAGGCTTCTTTTA	77589827	True	NA	NA	False	TTTAAA	-19	NA	77589952	77610356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_77590612_77603555_77603673_77609297
transcript_38569.known	chr11	-	2107	6	FSM	ENSG00000048649.14	ENST00000528095.5	2107	6	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	8.78635305459552	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAATTCAAATATAAGTTG	-77819992	False	NA	NA	False	NA	NA	NA	77820711	77701118	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_77702496_77725544_77725700_77740730_77740937_77747035_77747129_77764597_77764690_77820527
transcript_38573.nic	chr11	-	1039	5	ISM	ENSG00000048649.14	ENST00000528095.5	2107	6	-337	24454	-179	0	5prime_fragment	FALSE	canonical	3	136	junction_1	8.07774721070176	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAGGAAGAAACACC	NA	False	NA	-38	True	NA	NA	NA	77821048	77725572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_77725700_77740730_77740937_77747035_77747129_77764597_77764690_77820527
transcript_38574.known	chr11	-	604	4	FSM	ENSG00000048649.14	ENST00000440064.2	604	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	61.5304802516606	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAGGAAGAAACACC	-77819987	False	NA	-38	True	NA	NA	NA	77820706	77725572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_77725700_77740730_77740937_77764597_77764690_77820527
transcript_38578.known	chr11	-	3146	23	FSM	ENSG00000149262.17	ENST00000534064.6	3146	23	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_15	16.7179445333895	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTCTAGTTCCTGGTCT	-77991812	True	NA	-2	True	AATAAA	-17	NA	77994668	77878719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_77879128_77883831_77883953_77891318_77891463_77891680_77891841_77894289_77894350_77901420_77901552_77903539_77903621_77907716_77907811_77918820_77918979_77921339_77921474_77922355_77922472_77924749_77924893_77928341_77928548_77938650_77938826_77941179_77941252_77955941_77956063_77958745_77958835_77960340_77960392_77960952_77961139_77978995_77979103_77981458_77981577_77991107_77991300_77994589
transcript_38588.known	chr11	-	1845	12	FSM	ENSG00000149262.17	ENST00000529807.5	1845	12	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_4	9.52855647145737	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCCTATATAGTGTTTT	-77991810	True	NA	NA	False	AATAAA	-17	NA	77994666	77924441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_77924893_77928341_77928548_77938650_77938826_77941179_77941252_77955941_77956063_77958745_77958835_77960340_77960392_77960952_77961139_77978995_77979103_77981458_77981577_77991107_77991300_77994589
transcript_38594.nic	chr11	+	714	5	NIC	ENSG00000087884.15	novel	579	5	NA	NA	-19	0	combination_of_known_junctions	TRUE	canonical	3	12	junction_2	141.938366906203	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTGACTGTCACTCAC	77819109	True	NA	15	True	AATAAA	-15	NA	77821089	77872352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_77821242_77842478_77842629_77855344_77855483_77869721_77869818_77872174
transcript_38595.known	chr11	+	579	5	FSM	ENSG00000087884.15	ENST00000526415.5	579	5	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	110.384555079051	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTGACTGTCACTCAC	77819148	True	NA	15	True	AATAAA	-15	NA	77821128	77872352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_77821242_77841018_77841061_77842478_77842629_77869721_77869818_77872174
transcript_38597.known	chr11	+	531	4	FSM	ENSG00000087884.15	ENST00000393427.7	522	4	0	-9	0	7	multi-exon	FALSE	canonical	3	243	junction_1	41.0717529317765	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCACTCACCATTCTCCA	77819163	True	NA	24	True	AATAAA	-24	NA	77821143	77872361	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_77821242_77842478_77842629_77869721_77869818_77872174
transcript_38600.known	chr11	+	421	4	FSM	ENSG00000087884.15	ENST00000525409.5	421	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	45.3210767744986	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTGACTGTCACTCAC	77819206	True	NA	15	True	AATAAA	-15	NA	77821186	77872352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_77821238_77841018_77841061_77842478_77842629_77872174
transcript_38603.known	chr11	-	656	3	FSM	ENSG00000259112.2	ENST00000530054.1	656	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2025	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTACCGTGAGGCTCAGTT	-78041752	True	NA	NA	False	NA	NA	NA	78079865	78017045	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_78017271_78072997_78073142_78079578
transcript_38604.known	chr11	-	2168	3	FSM	ENSG00000151366.13	ENST00000281031.5	2168	3	0	0	0	0	multi-exon	FALSE	canonical	3	3593	junction_1	228.5	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTGTTGATCTCATCAG	-78041749	True	NA	0	True	AATAAA	-19	NA	78079862	78068296	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_78070037_78072997_78073142_78079578
transcript_38605.known	chr11	-	1673	2	FSM	ENSG00000151364.17	ENST00000353172.6	1673	2	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_1	0	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCAGTTTTGGTTCTGCT	-78020998	True	NA	-5	True	AATAAA	-15	NA	78023276	78015714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_78017271_78023159
transcript_38606.known	chr11	-	422	2	FSM	ENSG00000151366.13	ENST00000534029.5	422	2	0	0	0	0	multi-exon	FALSE	canonical	2	40	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTCTGACTCTTTATTG	-78041706	True	NA	-18	True	ATTAAA	-13	NA	78079819	78069855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_78070037_78079578
transcript_38609.known	chr11	-	1727	14	FSM	ENSG00000159063.14	ENST00000679986.1	1727	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	366.608395943589	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	-78133900	True	NA	-12	True	AATAAA	-14	NA	78139602	78100945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124024_78124215_78127357_78127437_78135229_78135348_78139493
transcript_38610.known	chr11	-	2479	14	FSM	ENSG00000159063.14	ENST00000680829.1	2479	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	358.183996219721	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTAGATATGTGCCAAGC	-78133915	True	NA	-20	True	AATAAA	-6	NA	78139617	78100953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_78101196_78102873_78102949_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78138709
transcript_38611.known	chr11	-	1677	14	FSM	ENSG00000159063.14	ENST00000376156.7	1677	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	334.172137904223	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTGCCAAGCAATTATT	-78133890	True	NA	-13	True	AATAAA	-13	NA	78139592	78100946	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_78101196_78102873_78102949_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
transcript_38612.known	chr11	-	1637	13	FSM	ENSG00000159063.14	ENST00000680866.1	1637	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	302.642895542291	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	-78133958	True	NA	-12	True	AATAAA	-14	NA	78139660	78100945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106913_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
transcript_38613.known	chr11	-	2443	13	FSM	ENSG00000159063.14	ENST00000681575.1	2443	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	299.512509013489	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	-78133942	True	NA	-12	True	AATAAA	-14	NA	78139644	78100945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78138705
transcript_38614.known	chr11	-	1653	13	FSM	ENSG00000159063.14	ENST00000526737.6	1653	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	301.159518454183	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	-78133944	True	NA	-12	True	AATAAA	-14	NA	78139646	78100945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124024_78124215_78127357_78127437_78139493
transcript_38619.known	chr11	-	1471	12	FSM	ENSG00000159063.14	ENST00000529139.6	1471	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	313.814784559722	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTATTTCATGGGAAAT	-78133922	True	NA	-2	True	AATAAA	-24	NA	78139624	78100935	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106913_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
transcript_38623.known	chr11	-	1320	11	FSM	ENSG00000159063.14	ENST00000532306.6	1320	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	330.348437259812	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGGAACTGCTTAGATA	-78133886	True	NA	-30	True	AAGAAA	-7	NA	78139588	78100963	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
transcript_38628.known	chr11	-	1566	12	FSM	ENSG00000159063.14	ENST00000525783.6	1566	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	305.054635399157	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTATTTCATGGGAAAT	-78133922	True	NA	-2	True	AATAAA	-24	NA	78139624	78100935	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78139493
transcript_38629.known	chr11	-	3389	2	FSM	ENSG00000188997.8	ENST00000340067.4	3389	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTATTCTTTTGTGTCTG	-78188496	True	NA	NA	False	TATAAA	-11	NA	78188626	78171248	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_78174584_78188572
transcript_38631.nnic	chr11	+	4438	12	NNC	ENSG00000118369.13	novel	4725	11	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	6.14964891828646	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGATTGTTCTTCCTTGG	78188461	True	NA	6	True	AATAAA	-18	NA	78188816	78214707	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_78189158_78196235_78196919_78197935_78198069_78198582_78198719_78199594_78199725_78200132_78200235_78200649_78200809_78205841_78206036_78207529_78207624_78208856_78208964_78209447_78210745_78213645
transcript_38636.known	chr11	+	2125	3	FSM	ENSG00000118369.13	ENST00000530535.5	2125	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTAGACCTCAGCTCCAAT	78188467	True	NA	NA	False	NA	NA	NA	78188822	78214138	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_78189158_78209447_78210745_78213645
transcript_38643.known	chr11	-	2512	14	FSM	ENSG00000137513.10	ENST00000281038.10	2512	14	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_13	64.1241399587066	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTATGGAAAAAAAGTTATA	-78569008	True	NA	-17	True	AATAAA	-21	NA	78574864	78435967	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_78436815_78441090_78441118_78443660_78443759_78465875_78466014_78469246_78469314_78478437_78478476_78478584_78478684_78493062_78493196_78528841_78528937_78559538_78559620_78566131_78566273_78568631_78568753_78571334_78571445_78574347
transcript_38644.nic	chr11	-	2031	14	NIC	ENSG00000137513.10	novel	2512	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	104	junction_13	157.228962807627	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTATGGAAAAAAAGTTATA	-78569008	True	NA	-17	True	AATAAA	-21	NA	78574864	78435967	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_78436815_78441090_78441118_78443660_78443759_78465875_78466014_78469246_78469314_78478437_78478476_78478584_78478684_78493062_78493196_78528841_78528937_78559538_78559620_78566131_78566273_78568631_78568753_78571334_78571445_78574828
transcript_38648.nic	chr11	-	1776	14	NIC	ENSG00000137513.10	novel	2512	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	104	junction_13	157.228962807627	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTACTTCATTAAACATT	-78569008	True	NA	27	True	GATAAA	-15	NA	78574864	78436222	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_78436815_78441090_78441118_78443660_78443759_78465875_78466014_78469246_78469314_78478437_78478476_78478584_78478684_78493062_78493196_78528841_78528937_78559538_78559620_78566131_78566273_78568631_78568753_78571334_78571445_78574828
transcript_38665.known	chr11	-	3489	9	FSM	ENSG00000137509.12	ENST00000313010.8	3489	9	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_7	20.1459518266077	213	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGAGACTTGAGTGCT	-82894667	True	NA	-7	True	AATAAA	-30	NA	82900430	82822935	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_82825123_82838386_82838575_82839260_82839426_82849048_82849219_82849913_82850072_82850323_82850506_82853176_82853279_82859976_82860118_82900234
transcript_38670.known	chr11	+	3524	6	FSM	ENSG00000165490.13	ENST00000533655.6	3524	6	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_5	22.630952255705	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTCTTTTTTAATTGTT	82898449	True	NA	18	True	AATAAA	-18	NA	82901735	82934659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_82901823_82913286_82913387_82914722_82914852_82928776_82928939_82930156_82930275_82931731
transcript_38673.known	chr11	+	961	5	FSM	ENSG00000165490.13	ENST00000525388.5	961	5	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_1	93.3019292405039	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTCATGGAGCCTTGTTT	82898455	True	NA	NA	False	NA	NA	NA	82901741	82932216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_82901823_82913282_82913387_82914722_82914852_82928776_82928939_82931731
transcript_38676.known	chr11	-	9859	5	FSM	ENSG00000137502.10	ENST00000527633.6	9859	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	3.76662979332984	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAGAATCATATGCCAT	-83071261	True	NA	NA	False	AATAAA	-19	NA	83071897	82973132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_82982416_82987586_82987771_82994038_82994123_82997223_82997325_83071690
transcript_38680.known	chr11	+	2467	3	FSM	ENSG00000246067.9	ENST00000656330.1	2467	3	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	10	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCCCGGGCAATAACAGCA	83069846	True	NA	NA	False	NA	NA	NA	83072051	83075492	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_83072147_83072622_83072805_83073302
transcript_38682.known	chr11	+	563	3	FSM	ENSG00000246067.9	ENST00000501011.8	572	3	6	3	0	0	multi-exon	FALSE	canonical	3	30	junction_1	51	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTTCTGTGTCATGTTT	83069897	True	NA	16	True	NA	NA	NA	83072102	83073604	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_83072182_83072622_83072805_83073302
transcript_38684.known	chr11	+	7677	16	FSM	ENSG00000165494.12	ENST00000298281.8	7677	16	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	34.0446765295251	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACACCTGGTGCAATGGGT	NA	False	NA	NA	False	NA	NA	NA	83156987	83187451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_83157632_83161326_83161453_83163678_83163868_83164206_83164402_83165599_83166715_83167124_83167309_83167414_83167506_83168427_83169996_83171817_83171915_83177084_83177205_83177713_83177820_83181007_83181192_83181853_83182010_83182398_83182492_83183037_83183074_83184678
transcript_38688.nnic	chr11	-	1641	10	NIC	ENSG00000137500.10	novel	1919	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_9	325.420753282065	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTGGGTTTTCAAAGT	-83280062	True	NA	-25	True	TATAAA	-22	NA	83285988	83261455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83278725_83278830_83280140_83280261_83285126_83285212_83285552
transcript_38692.known	chr11	-	1986	9	FSM	ENSG00000137500.10	ENST00000529611.5	1986	9	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_8	245.374076666628	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAAGTTGTGTGGGTTTT	-83280072	True	NA	-31	True	TATAAA	-16	NA	83285998	83261461	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83278725_83278830_83280140_83280261_83285126
transcript_38693.known	chr11	-	1919	9	FSM	ENSG00000137500.10	ENST00000525503.5	1919	9	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_8	199.014721503209	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTGGGTTTTCAAAGT	-83285680	True	NA	-25	True	TATAAA	-22	NA	83286351	83261455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83278725_83278830_83280140_83280261_83285552
transcript_38694.known	chr11	-	4014	9	FSM	ENSG00000137500.10	ENST00000529689.6	3990	9	-40	16	-17	-16	multi-exon	FALSE	canonical	3	507	junction_8	131.409426982998	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGTTGACCTTAATCCA	NA	False	NA	NA	False	AATAAA	-14	NA	83286407	83259096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83278725_83278830_83280140_83280261_83285872
transcript_38695.known	chr11	-	1550	9	FSM	ENSG00000137500.10	ENST00000455220.6	1550	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	285.660610471587	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGGGTGGATCACTTGAGG	NA	False	NA	30	True	NA	NA	NA	83286390	83261316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83278725_83278830_83280140_83280261_83286099
transcript_3870.known	chr1	-	766	2	FSM	ENSG00000244038.11	ENST00000477229.1	766	2	0	0	0	0	multi-exon	FALSE	canonical	3	4024	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAATATGTCCAGCAGCC	-20625590	True	NA	NA	False	NA	NA	NA	20661369	20660398	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_20660992_20661196
transcript_38703.nic	chr11	-	1856	8	NIC	ENSG00000137500.10	novel	1919	9	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	199	junction_6	292.388056374066	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTGGGTTTTCAAAGT	NA	False	NA	-25	True	TATAAA	-22	NA	83286392	83261455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83280140_83280261_83285552
transcript_38704.known	chr11	-	1053	8	FSM	ENSG00000137500.10	ENST00000529745.5	1053	8	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_6	253.751123451821	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACTGTGTCTTTATTGTG	-83285539	False	NA	-21	True	ACTAAA	-27	NA	83286210	83261756	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83280140_83280261_83285872
transcript_3871.known	chr1	-	3572	15	FSM	ENSG00000117245.13	ENST00000375044.5	3572	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_14	13.8691038216723	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCCCTTCTCTGACCCTC	-20717027	False	NA	-10	True	AATAAA	-16	NA	20717491	20664013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_20664763_20666213_20666332_20670420_20670492_20671937_20672197_20682652_20682885_20684808_20685021_20686045_20686127_20687387_20687945_20690187_20690336_20698378_20698489_20704446_20704900_20709638_20709829_20713453_20713556_20715492_20715640_20717348
transcript_38719.known	chr11	+	4066	6	FSM	ENSG00000137494.14	ENST00000393389.7	4066	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_5	14.4416065588286	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTTGATACATTGTTTT	83193098	True	NA	4	True	AATAAA	-17	NA	83193738	83215200	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_83194729_83198478_83198643_83206057_83206166_83210299_83210420_83211294_83211431_83212652
transcript_38724.known	chr11	+	3230	6	FSM	ENSG00000137494.14	ENST00000526731.5	3230	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	14.7918896696805	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTTGATACATTGTTTT	83193608	False	NA	4	True	AATAAA	-17	NA	83194248	83215200	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_83194729_83198478_83198643_83206057_83206166_83210299_83210420_83211294_83211431_83212978
transcript_38730.nic	chr11	+	1353	5	ISM	ENSG00000165494.12	ENST00000530304.5	2649	8	-20	2754	-4	2148	5prime_fragment	FALSE	canonical	3	52	junction_1	16.1941347407016	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAATCAGGTGAAAAAATA	83153901	True	NA	NA	False	AGTAAA	-44	NA	83157122	83165933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_83157632_83161326_83161453_83163678_83163868_83164206_83164402_83165599
transcript_38732.nic	chr11	+	1590	5	ISM	ENSG00000165494.12	ENST00000530304.5	2649	8	-20	2517	-4	2385	5prime_fragment	FALSE	canonical	3	52	junction_1	16.1941347407016	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTGCAGAAAAAAAGGATAAA	83153901	True	NA	32	True	NA	NA	NA	83157122	83166170	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_83157632_83161326_83161453_83163678_83163868_83164206_83164402_83165599
transcript_38738.nic	chr11	-	753	4	ISM	ENSG00000137500.10	ENST00000525503.5	1919	9	363	13192	0	-205	5prime_fragment	FALSE	canonical	3	276	junction_3	211.553513062036	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAATGAGGTGATACAAAT	-83280062	True	NA	-9	True	NA	NA	NA	83285988	83274647	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_83274741_83278725_83278830_83280140_83280261_83285552
transcript_38739.known	chr11	-	628	4	FSM	ENSG00000137500.10	ENST00000526631.1	628	4	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_3	103.293540725234	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAATAAGAGTTACATTTT	-83280052	True	NA	NA	False	TATAAA	-23	NA	83285978	83274442	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_83274741_83278725_83278830_83280140_83280261_83285872
transcript_3874.nnic	chr1	-	3552	10	NNC	ENSG00000189410.12	novel	3898	10	NA	NA	97	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_9	9.18936583472681	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTGTCTGCTACAGACTT	-20731730	True	NA	-18	True	AATAAA	-13	NA	20732181	20719731	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_20721996_20722755_20722916_20723625_20723735_20724082_20724252_20724395_20724636_20725919_20726067_20727000_20727076_20727522_20727604_20727957_20728087_20732003
transcript_38740.known	chr11	-	549	3	FSM	ENSG00000247137.9	ENST00000528524.5	549	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATATGTAGTAGATAAATT	NA	False	NA	1	True	NA	NA	NA	83193794	83191028	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_83191169_83192735_83192817_83193466
transcript_38742.known	chr11	-	876	2	FSM	ENSG00000247137.9	ENST00000500634.2	876	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAAGCCTCTCCGTGCGTA	-83193230	True	NA	NA	False	NA	NA	NA	83193662	83192136	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_83192817_83193466
transcript_38743.known	chr11	+	1720	1	FSM	ENSG00000165494.12	ENST00000624931.1	1720	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTCTTTTTTATTTAC	83153938	True	NA	12	True	AATAAA	-15	NA	83157159	83158879	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_83157200_83158900
transcript_38744.known	chr11	+	2649	8	FSM	ENSG00000165494.12	ENST00000530304.5	2649	8	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	15.4338615269366	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCAGCTTCTCTTCGGTT	83153921	True	NA	NA	False	AATAAA	-28	NA	83157142	83168687	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_83157632_83161326_83161453_83163678_83163868_83164206_83164402_83165599_83166715_83167124_83167309_83167414_83167506_83168427
transcript_38748.nic	chr11	-	2157	11	NIC	ENSG00000150672.18	novel	7730	22	NA	NA	-34	0	combination_of_known_junctions	TRUE	canonical	3	12	junction_6	5.78705451849211	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAGGAAAAAAGAAAGGA	NA	False	NA	NA	False	AATGAA	-4	NA	83725437	83459345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_83459925_83462001_83462094_83466707_83466818_83469200_83469374_83471625_83471728_83472726_83472778_83484128_83484229_83532707_83532784_83541681_83541859_83633210_83633326_83724855
transcript_38750.known	chr11	-	566	5	FSM	ENSG00000150672.18	ENST00000530800.5	566	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	8.72854512504805	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAAATTTGGGGGCAGTT	-83724897	False	NA	NA	False	NA	NA	NA	83724956	83486154	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_83486252_83532707_83532784_83541681_83541859_83633210_83633326_83724855
transcript_38758.known	chr11	+	1149	6	FSM	ENSG00000171204.13	ENST00000529197.1	1149	6	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_1	187.764746424881	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTTTCCTCTTTGTATG	85623497	True	NA	20	True	AATAAA	-34	NA	85628604	85636510	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_85628689_85631144_85631317_85631686_85631809_85634085_85634280_85635666_85635779_85636045
transcript_38760.known	chr11	+	675	6	FSM	ENSG00000171204.13	ENST00000530783.5	675	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	312.498703997313	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATTCCTCTAGTCTTTCAG	85623489	True	NA	NA	False	AATGAA	-9	NA	85628596	85636128	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_85628689_85629131_85629204_85631686_85631809_85634085_85634280_85635666_85635779_85636045
transcript_38761.known	chr11	+	820	6	FSM	ENSG00000171204.13	ENST00000531477.5	820	6	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_2	306.683158976818	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTATACATGAAGAGTAAC	85623485	True	NA	NA	False	ATTAAA	-43	NA	85628592	85636210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_85628689_85629131_85629263_85631686_85631809_85634085_85634280_85635666_85635779_85636045
transcript_38764.known	chr11	+	1015	5	FSM	ENSG00000171204.13	ENST00000358867.11	1015	5	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_1	149.935611180266	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTGGGCTTTAAGGTC	85623485	True	NA	46	True	AATAAA	-43	NA	85628592	85636536	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_85628689_85631686_85631809_85634085_85634280_85635666_85635779_85636045
transcript_38767.known	chr11	+	376	4	FSM	ENSG00000171204.13	ENST00000531274.1	376	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	299.351892520417	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTAAATGGTCTATACC	85623522	True	NA	NA	False	AATGAA	-40	NA	85628629	85636159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_85628689_85634085_85634177_85635666_85635779_85636045
transcript_38768.known	chr11	+	853	4	FSM	ENSG00000171204.13	ENST00000526822.5	853	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	303.494096592778	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCATCTTTCCTCTTTGT	85623496	True	NA	17	True	AATAAA	-31	NA	85628603	85636507	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_85628689_85634085_85634280_85635666_85635779_85636045
transcript_38770.nic	chr11	+	373	3	ISM	ENSG00000171204.13	ENST00000528361.5	1388	4	-4	3296	0	0	5prime_fragment	FALSE	canonical	3	263	junction_1	13.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATCTTAGAAAAGAAATGTA	85623485	True	NA	NA	False	NA	NA	NA	85628592	85631791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_85628689_85631144_85631317_85631686
transcript_38772.known	chr11	+	722	5	FSM	ENSG00000171202.7	ENST00000531366.5	722	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	214.915099516065	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTAATGTTATGTCTAAT	85644681	True	NA	17	True	AATAAA	-18	NA	85647986	85656547	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_85648090_85650248_85650342_85654062_85654235_85655593_85655709_85656308
transcript_38773.known	chr11	+	759	5	FSM	ENSG00000171202.7	ENST00000304511.7	759	5	0	0	0	0	multi-exon	FALSE	canonical	3	476	junction_2	25.6953303150592	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATGTCTAATGTTATGT	85644661	True	NA	12	True	AATAAA	-13	NA	85647966	85656542	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_85648090_85650248_85650342_85654062_85654257_85655593_85655709_85656308
transcript_38777.known	chr11	+	656	4	FSM	ENSG00000171202.7	ENST00000528105.5	656	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	233.337142826045	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATGTCTAATGTTATGT	85644671	True	NA	12	True	AATAAA	-13	NA	85647976	85656542	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_85648090_85654062_85654257_85655593_85655709_85656308
transcript_38778.known	chr11	-	898	5	FSM	ENSG00000137504.15	ENST00000527529.6	898	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	106.54928437113	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTTTCATGGGAGTGA	-85656453	False	7736	NA	False	AATAGA	-44	NA	85664189	85660334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_85660598_85661636_85661750_85662388_85662458_85663523_85663602_85663814
transcript_3878.nnic	chr1	-	3403	9	NNC	ENSG00000189410.12	novel	3705	9	NA	NA	117	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_8	10.8965304110988	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTGTCTGCTACAGACTT	-20731710	True	NA	-18	True	AATAAA	-13	NA	20732161	20719731	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_20721996_20722755_20722916_20723625_20723735_20724082_20724252_20724395_20724636_20725919_20726067_20727000_20727076_20727522_20727604_20732003
transcript_38781.known	chr11	-	4368	5	FSM	ENSG00000137504.15	ENST00000682836.1	4368	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	76.4215283804243	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCCTGTTGAAAGAACAAAT	-85657328	True	NA	79	True	AATATA	-8	NA	85665064	85657741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_85660598_85662388_85662458_85663178_85663294_85663523_85663602_85663814
transcript_38782.known	chr11	-	1431	4	FSM	ENSG00000137504.15	ENST00000260058.9	1431	4	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	64.3963422011599	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTATTTATTTCCTGG	-85656917	False	NA	NA	False	NA	NA	NA	85664653	85660152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_85660598_85662388_85662458_85663523_85663602_85663814
transcript_38784.known	chr11	-	2850	4	FSM	ENSG00000137504.15	ENST00000525639.1	2850	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	95.4195414414096	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTTTCATGGGAGTGA	-85657366	True	NA	NA	False	AATAGA	-44	NA	85665102	85660334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_85661750_85662388_85662458_85663523_85663602_85663814
transcript_38789.known	chr11	-	745	3	FSM	ENSG00000137504.15	ENST00000528889.1	745	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	119	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTTGGAAAGATTATTTG	-85656123	False	NA	NA	False	TATAAA	-7	NA	85663859	85661952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_85662458_85663523_85663602_85663697
transcript_38790.nic	chr11	-	1478	3	ISM	ENSG00000137504.15	ENST00000525639.1	2850	4	-30	2041	-3	-423	5prime_fragment	FALSE	canonical	3	222	junction_2	18	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAGGAAAAAGAGGTAATAT	-85657396	True	NA	NA	False	AAGAAA	-1	NA	85665132	85662375	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_85662458_85663523_85663602_85663814
transcript_38795.nic	chr11	-	3677	21	NIC	ENSG00000073921.18	novel	3474	20	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_9	34.6081998954005	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTATGGTATTCTGG	-86064922	True	NA	-14	True	AATAAA	-18	NA	86069112	85957683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_85959061_85974707_85974813_85976622_85976683_85978069_85978094_85981128_85981229_85981744_85981776_85981871_85982004_85983865_85983974_85990249_85990400_85996825_85996930_86000642_86000780_86001034_86001159_86003365_86003452_86007541_86007584_86011029_86011137_86012280_86012393_86014869_86014964_86022366_86022470_86026291_86026368_86031468_86031612_86068650
transcript_38797.nic	chr11	-	3697	20	NIC	ENSG00000073921.18	novel	3474	20	NA	NA	14	0	intron_retention	FALSE	canonical	3	67	junction_7	21.6541692773335	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTATGGTATTCTGG	-86069229	False	68	-14	True	AATAAA	-18	NA	86069297	85957683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_85959061_85974707_85974813_85976622_85976683_85978069_85978094_85981128_85981229_85981744_85981776_85981871_85981989_85983865_85983974_85996825_85996930_86000642_86000780_86001034_86001159_86003365_86003452_86007541_86007584_86011029_86011137_86012280_86012393_86014869_86014964_86022366_86022470_86026291_86026368_86031468_86031612_86068650
transcript_38798.known	chr11	-	3474	20	FSM	ENSG00000073921.18	ENST00000532317.5	3474	20	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_7	19.9979223297553	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTATGGTATTCTGG	-86064869	True	NA	-14	True	AATAAA	-18	NA	86069059	85957683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_85959061_85974707_85974813_85976622_85976683_85978069_85978094_85981128_85981229_85981744_85981776_85981871_85982004_85983865_85983974_85996825_85996930_86000642_86000780_86001034_86001159_86003365_86003452_86007541_86007584_86011029_86011137_86012280_86012393_86014869_86014964_86022366_86022470_86026291_86026368_86031468_86031612_86068650
transcript_38800.known	chr11	-	4134	20	FSM	ENSG00000073921.18	ENST00000393346.8	4134	20	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_3	41.579680206733	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGAAGTTGTACTTTTAT	-86064894	True	NA	-12	True	ATTAAA	-16	NA	86069084	85957174	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_85959061_85974707_85974813_85976622_85976683_85981128_85981229_85981744_85981776_85981871_85982004_85983865_85983974_85990249_85990400_85996825_85996930_86000642_86000780_86001034_86001159_86003365_86003452_86007541_86007584_86011029_86011137_86012280_86012393_86014869_86014964_86022366_86022470_86026291_86026368_86031468_86031612_86068650
transcript_38808.known	chr11	-	3613	20	FSM	ENSG00000073921.18	ENST00000526033.5	3613	20	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	45.4871446939679	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTTTGTTATGGTATT	-86064907	True	NA	-18	True	AATAAA	-14	NA	86069097	85957687	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_85959061_85974707_85974813_85976622_85976683_85981128_85981229_85981744_85981776_85981871_85982004_85983865_85983974_85990249_85990379_85996825_85996930_86000642_86000780_86001034_86001159_86003365_86003452_86007541_86007584_86011029_86011137_86012280_86012393_86014869_86014964_86022366_86022470_86026291_86026368_86031468_86031612_86068650
transcript_38809.known	chr11	+	1696	13	FSM	ENSG00000074266.22	ENST00000351625.10	1696	13	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	143.911696497849	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGTTTTTTGTAGTTCT	86243110	True	NA	83	True	AATAAA	-23	NA	86245222	86278813	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_86245344_86250295_86250449_86252147_86252241_86255221_86255288_86256386_86256513_86257514_86257597_86264171_86264264_86266082_86266217_86268455_86268562_86270082_86270158_86276979_86277139_86277917_86277992_86278398
transcript_38813.known	chr11	+	1791	12	FSM	ENSG00000074266.22	ENST00000673233.2	1791	12	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_2	31.5982005973716	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGTTGTTTTTTGTAGT	86242518	False	NA	80	True	AATAAA	-20	NA	86245049	86278810	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_86245344_86250295_86250449_86252147_86252241_86255221_86255288_86256386_86256513_86257514_86257597_86264171_86264264_86266082_86266217_86268455_86268562_86276979_86277139_86277917_86277992_86278398
transcript_38815.known	chr11	+	2033	11	FSM	ENSG00000074266.22	ENST00000327320.8	2033	11	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_2	33.0316514876262	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTGTGTGTTTAGTTA	86242608	False	NA	5	True	AATAAA	-13	NA	86245139	86278735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_86245344_86250295_86250449_86252147_86252241_86255221_86255288_86256386_86256513_86257514_86257597_86264171_86264264_86266082_86266217_86268455_86268562_86276979_86277139_86277917
transcript_38818.known	chr11	+	1484	10	FSM	ENSG00000074266.22	ENST00000525244.5	1484	10	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_2	34.2960963117119	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAATCTATTGTTAGGA	86243155	False	NA	NA	False	GATAAA	-22	NA	86245267	86277535	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_86245344_86250295_86250449_86252147_86252241_86255221_86255288_86256386_86256513_86257514_86257597_86264171_86264264_86266082_86266217_86268455_86268562_86276979
transcript_38819.known	chr11	+	1745	10	FSM	ENSG00000074266.22	ENST00000528180.5	1745	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	128.211438021364	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTGCTTTTAATAAAAATT	86242221	True	NA	-23	True	NA	NA	NA	86244752	86278707	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_86245344_86250295_86250449_86252147_86252241_86255221_86255288_86256386_86256513_86257514_86257597_86264171_86264264_86276979_86277139_86277917_86277992_86278398
transcript_3882.nnic	chr1	-	3120	6	NNC	ENSG00000189410.12	novel	3705	9	NA	NA	97	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	13.9857069896377	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTGTCTGCTACAGACTT	-20731730	True	NA	-18	True	AATAAA	-13	NA	20732181	20719731	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_20721996_20722755_20722916_20723625_20723735_20724082_20724252_20724395_20724636_20732003
transcript_38830.known	chr11	+	1409	5	FSM	ENSG00000149196.17	ENST00000528004.5	1409	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	505.559281884924	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGAGCAAATTTCTCTCA	86293080	True	NA	NA	False	NA	NA	NA	86302250	86345229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_86302479_86306244_86306483_86326512_86326677_86337378_86337531_86344602
transcript_38834.known	chr11	+	1108	5	FSM	ENSG00000149196.17	ENST00000278483.8	1108	5	0	0	0	0	multi-exon	FALSE	canonical	3	699	junction_4	133.507256357098	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGCATGTGTAATCATT	86293069	True	NA	29	True	AATAAA	-30	NA	86302239	86345943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_86302479_86306244_86306483_86337378_86337531_86344602_86344722_86345583
transcript_38838.known	chr11	+	499	5	NNC	ENSG00000149196.17	novel	1108	5	NA	NA	2977	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	396.574709228917	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGAAATTTGTCATGTT	86306285	True	NA	18	True	AATAAA	-15	NA	86306332	86345662	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_86306415_86306415_86306483_86337378_86337531_86344602_86344722_86345583
transcript_38839.known	chr11	+	1694	4	FSM	ENSG00000149196.17	ENST00000533986.5	1694	4	0	0	0	0	multi-exon	FALSE	canonical	3	940	junction_2	43.7137151119519	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAATAAAATAATTTTTA	NA	False	NA	-6	True	AAAACA	-4	NA	86302210	86345638	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_86302479_86306244_86306483_86337378_86337531_86344602
transcript_38841.known	chr11	+	715	4	FSM	ENSG00000149196.17	ENST00000531485.5	715	4	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	382.826621621619	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACATTGAAAAATGAAAA	86293072	True	NA	NA	False	ATTAAA	-19	NA	86302242	86345791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_86302479_86337378_86337531_86344602_86344722_86345583
transcript_38847.known	chr11	-	2311	15	FSM	ENSG00000151376.18	ENST00000543262.5	2311	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.37868940076382	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCCCTGGGAGTTCACTT	NA	False	NA	74	True	AATAAA	-14	NA	86672636	86441109	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_86441441_86442820_86442920_86446313_86446488_86447064_86447208_86448149_86448256_86449888_86450003_86450300_86450399_86465090_86465201_86487336_86487441_86497962_86498125_86508791_86508868_86556552_86556703_86559689_86559824_86671761_86671959_86672323
transcript_38848.nic	chr11	-	2077	15	NIC	ENSG00000151376.18	novel	2311	15	NA	NA	-8	-84	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	2.32115382989599	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGTCGCTGTGTTTTTT	-86672406	False	NA	-10	True	TATAAA	-26	NA	86672436	86441193	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_86441441_86442820_86442920_86446313_86446488_86447064_86447208_86448149_86448256_86449888_86450003_86450300_86450399_86465090_86465201_86487336_86487441_86497962_86498125_86508791_86508868_86556552_86556703_86559689_86559824_86671761_86671959_86672273
transcript_38851.known	chr11	-	2240	14	FSM	ENSG00000151376.18	ENST00000393324.7	2240	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.37342286469869	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCTGGGAGTTCACTTTT	-86672168	False	NA	76	True	AATAAA	-16	NA	86672198	86441107	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_86441441_86442820_86442920_86446313_86446488_86447064_86447208_86448149_86448256_86449888_86450003_86450300_86450399_86465090_86465201_86487336_86487441_86497962_86498125_86508791_86508868_86556552_86556703_86559689_86559824_86671761
transcript_38852.known	chr11	+	3713	2	FSM	ENSG00000150687.12	ENST00000280258.6	3713	2	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTTTTCTCATATAAT	86799716	True	NA	5	True	AATAAA	-18	NA	86800541	86811233	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_86800652_86807630
transcript_38854.known	chr11	-	7387	2	FSM	ENSG00000174804.4	ENST00000531380.2	7387	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTGTGTGACTTGGCAT	-86954355	True	NA	-11	True	AATAAA	-14	NA	86955395	86945678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_86952471_86954800
transcript_38855.known	chr11	+	1226	3	FSM	ENSG00000246523.9	ENST00000499504.8	1226	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCCCCAAATTTCTATA	86955508	True	NA	NA	False	AATATA	-43	NA	86955615	87000959	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_86955713_86957981_86958027_86999875
transcript_38857.known	chr11	+	8980	15	FSM	ENSG00000166575.17	ENST00000305494.6	8980	15	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_4	13.6995828925034	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGGTAGATCTCCTTT	87033917	True	NA	9	True	AATAAA	-19	NA	87037933	87328824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_87038187_87067693_87067822_87071522_87071616_87091361_87091396_87157340_87157407_87236637_87236685_87295781_87295824_87302295_87302443_87305935_87306006_87309504_87309673_87313424_87313489_87314470_87314548_87318136_87318236_87319309_87319378_87321200
transcript_38861.known	chr11	+	3938	14	FSM	ENSG00000166575.17	ENST00000340353.11	3938	14	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	32.7645355971881	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATTGTCTCAAATCTATT	NA	False	NA	35	True	AGTAAA	-20	NA	87037843	87323758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_87038187_87067693_87067822_87071522_87071616_87091361_87091396_87236637_87236685_87295781_87295824_87302295_87302443_87305935_87306006_87309504_87309673_87313424_87313489_87314470_87314548_87318136_87318236_87319309_87319378_87321200
transcript_38874.known	chr11	-	1432	3	FSM	ENSG00000123892.12	ENST00000243662.11	1432	3	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_2	10	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGAAAGTGCTTTAAGT	-88174616	True	NA	-12	True	AATAAA	-25	NA	88175443	88113250	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_88114141_88149674_88149956_88175182
transcript_38878.nnic	chr11	-	3477	2	NNC	ENSG00000123892.12	novel	1432	3	NA	NA	0	-57518	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCTGTTGTCATAATTG	-88174616	True	NA	NA	False	AATAAA	-22	NA	88175443	88171129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_88174346_88175182
transcript_38879.known	chr11	-	1957	8	FSM	ENSG00000109861.17	ENST00000677802.1	1957	8	0	0	0	0	multi-exon	FALSE	canonical	1	27	junction_5	761.464083867656	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGAGTTTATGTTTACT	-88311922	True	NA	-6	True	AATAAA	-19	NA	88337738	88293591	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_88294509_88296132_88296265_88300529_88300646_88309162_88309319_88312387_88312555_88328111_88328197_88334936_88335083_88337500
transcript_38880.known	chr11	-	1870	7	FSM	ENSG00000109861.17	ENST00000227266.10	1870	7	0	0	0	0	multi-exon	FALSE	canonical	3	1433	junction_3	223.707956943869	1659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGAGTTTATGTTTACT	-88311920	True	NA	-6	True	AATAAA	-19	NA	88337736	88293591	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_88294509_88296132_88296265_88300529_88300646_88309162_88309319_88312387_88312555_88334936_88335083_88337500
transcript_38881.known	chr11	-	1828	7	FSM	ENSG00000109861.17	ENST00000676612.1	1828	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_6	607.606163563208	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGAGTTTATGTTTACT	-88311924	True	NA	-6	True	AATAAA	-19	NA	88337740	88293591	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_88294509_88296132_88296265_88300529_88300646_88309162_88309319_88312387_88312555_88334936_88335083_88337546
transcript_38882.known	chr11	-	2774	7	FSM	ENSG00000109861.17	ENST00000679224.1	2774	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	614.39771773303	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATAAGTTTTTTTTCACTA	-88311933	True	NA	NA	False	TATAAA	-18	NA	88337749	88292493	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_88294509_88296132_88296265_88300529_88300646_88309162_88309319_88312387_88312555_88334936_88335083_88337707
transcript_38883.known	chr11	-	1802	7	FSM	ENSG00000109861.17	ENST00000678395.1	1802	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	664.580485887317	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGAGTTTATGTTTACT	-88311914	True	NA	-6	True	AATAAA	-19	NA	88337730	88293591	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_88294509_88296132_88296265_88300529_88300646_88309162_88309319_88312449_88312555_88334936_88335083_88337500
transcript_38884.known	chr11	-	1667	7	FSM	ENSG00000109861.17	ENST00000678464.1	1667	7	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	616.128233406001	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTGCTTAATCATTTGT	-88311920	True	NA	61	True	NA	NA	NA	88337736	88293761	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_88294476_88296132_88296265_88300529_88300646_88309162_88309319_88312387_88312555_88334936_88335083_88337500
transcript_38886.known	chr11	-	1431	6	FSM	ENSG00000109861.17	ENST00000678915.1	1431	6	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	650.876823984385	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTGTAGACTTTCAGCAG	-88311964	True	NA	-120	True	NA	NA	NA	88337780	88293942	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_88294509_88300529_88300646_88309162_88309319_88312387_88312555_88334936_88335083_88337500
transcript_38888.known	chr11	-	900	5	FSM	ENSG00000109861.17	ENST00000393301.5	900	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	832.809514534987	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGTTGTTCTTTTTCTCTT	-88311909	True	NA	-23	True	AATAAA	-16	NA	88337725	88326087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_88326444_88327928_88328017_88328111_88328197_88334936_88335083_88337500
transcript_38892.known	chr11	-	6144	4	FSM	ENSG00000109861.17	ENST00000524463.6	6144	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	899.21904388691	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTGGTATTGTTTTATT	-88311964	True	NA	NA	False	AATAAA	-33	NA	88337780	88320810	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_88326444_88328111_88328197_88334936_88335083_88337500
transcript_38894.known	chr11	-	1604	3	FSM	ENSG00000109861.17	ENST00000679199.1	1604	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	988.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTCAGACTGCTTCCTC	-88311920	True	NA	NA	False	TATAAA	-24	NA	88337736	88315252	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_88316475_88334936_88335083_88337500
transcript_38896.known	chr11	-	724	3	FSM	ENSG00000109861.17	ENST00000677976.1	724	3	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	909	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGTTGTTCTTTTTCTCTT	-88311906	True	NA	-23	True	AATAAA	-16	NA	88337722	88326087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_88326444_88334936_88335083_88337500
transcript_38902.known	chr11	-	778	4	FSM	ENSG00000109861.17	ENST00000529974.2	778	4	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	908.920360769975	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGTTCTTTTTCTCTTTT	-88311917	True	NA	-21	True	AATAAA	-18	NA	88337733	88326085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_88326400_88328111_88328197_88334936_88335083_88337500
transcript_38906.known	chr11	-	4269	18	FSM	ENSG00000086991.13	ENST00000263317.9	4269	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	3.08921553070609	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCCTTGAAGTTTCTA	-89491364	False	NA	NA	False	AATAAA	-15	NA	89491375	89324352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_89326877_89335844_89335946_89337446_89337516_89340062_89340172_89342073_89342194_89354961_89355044_89373431_89373493_89400016_89400080_89400214_89400380_89402325_89402543_89421901_89421983_89432783_89432857_89440687_89440716_89444134_89444233_89449439_89449525_89451784_89451896_89490457_89490554_89491189
transcript_38907.known	chr11	-	2156	17	FSM	ENSG00000086991.13	ENST00000534731.5	2156	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	3.26379284728673	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCACTCCAGGCAAATATAT	-89491317	False	NA	NA	False	TATAAA	-21	NA	89491328	89326298	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_89326877_89335844_89335946_89337446_89337516_89340062_89340172_89354961_89355044_89373431_89373493_89400016_89400080_89400214_89400380_89402325_89402543_89421901_89421983_89432783_89432857_89440687_89440716_89444134_89444233_89449439_89449525_89451784_89451896_89490457_89490554_89491189
transcript_3891.nic	chr1	-	4382	13	NIC	ENSG00000127483.19	novel	3884	13	NA	NA	-24	0	intron_retention	FALSE	canonical	2	92	junction_12	101.592698501855	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTGAACCGTAGCTTAT	-20786680	False	NA	-24	True	AATAAA	-16	NA	20786690	20742681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_20745092_20745542_20745657_20747543_20747656_20749722_20749883_20757165_20757257_20765376_20765532_20767583_20767665_20770929_20771074_20773450_20773611_20776596_20776751_20779811_20779912_20780344_20780541_20786185
transcript_38910.known	chr11	+	3466	19	FSM	ENSG00000077616.11	ENST00000534061.6	3466	19	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_11	4.82182538049648	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAACGAGTTAAGAATTA	90134078	True	NA	NA	False	AATAAA	-22	NA	90134662	90192894	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_90134841_90135558_90135671_90147329_90147517_90149005_90149108_90150481_90150608_90152297_90152485_90158144_90158239_90159238_90159338_90162948_90163035_90163309_90163430_90163534_90163618_90168928_90168993_90170068_90170137_90173823_90173916_90175971_90176063_90177852_90178118_90181619_90181702_90182915_90183009_90191557
transcript_38914.known	chr11	-	1136	12	FSM	ENSG00000110172.12	ENST00000525317.5	1136	12	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_6	169.932655596317	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGGGAGATGGAAGGAAG	-90213944	True	NA	NA	False	AAAAAG	-32	NA	90223030	90202406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_90202552_90202812_90202876_90203307_90203428_90205459_90205566_90206201_90206273_90206747_90206811_90210535_90210595_90211214_90211319_90214017_90214176_90215173_90215231_90218134_90218185_90222890
transcript_38919.known	chr11	-	3070	11	FSM	ENSG00000110172.12	ENST00000320585.11	3070	11	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_6	52.0523774673165	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTGTCTTTTTTAGC	-90213963	True	NA	2	True	AATAAA	-30	NA	90223049	90200428	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_90202552_90202812_90202876_90203307_90203428_90205459_90205566_90206201_90206273_90210535_90210595_90211214_90211319_90214017_90214176_90215173_90215231_90218134_90218185_90222890
transcript_38923.nic	chr11	-	567	5	ISM	ENSG00000110172.12	ENST00000525317.5	1136	12	-59	8809	-12	-645	5prime_fragment	FALSE	canonical	3	408	junction_4	51.5479146037936	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAGATTTTATTTTGTTT	-90214003	True	NA	NA	False	GATAAA	-37	NA	90223089	90211215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_90211319_90214017_90214176_90215173_90215231_90218134_90218185_90222890
transcript_38926.known	chr11	-	564	5	FSM	ENSG00000110172.12	ENST00000530765.5	564	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	205.324590587684	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTCATGCTATGAACT	-90213991	True	NA	NA	False	NA	NA	NA	90223077	90213308	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_90213421_90214017_90214176_90215173_90215231_90218134_90218185_90222890
transcript_38927.known	chr11	-	566	6	FSM	ENSG00000110172.12	ENST00000533772.5	566	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	230.861343667579	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGGACCTCATGTAAGAAT	-90213963	True	NA	NA	False	NA	NA	NA	90223049	90210570	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_90210592_90211214_90211336_90214017_90214176_90215173_90215231_90218134_90218185_90222890
transcript_3893.known	chr1	-	3884	13	FSM	ENSG00000127483.19	ENST00000312239.10	3884	13	0	0	0	0	multi-exon	FALSE	canonical	2	42	junction_12	112.565875774539	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACCGTAGCTTATATT	-20781966	True	NA	-21	True	AATAAA	-19	NA	20786652	20742678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_20745092_20745542_20745657_20747543_20747656_20749722_20749883_20757165_20757257_20765376_20765532_20767583_20767665_20770929_20771074_20773450_20773611_20776596_20776751_20779811_20779912_20780344_20780541_20786648
transcript_38938.known	chr11	-	6037	11	FSM	ENSG00000180773.15	ENST00000326402.9	6037	11	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_5	20.0489401216124	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCCTTTTAGATAACATT	-93195281	True	NA	-4	True	AATAAA	-15	NA	93197991	93144173	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_93148845_93154107_93154278_93162705_93162876_93165917_93166017_93167943_93168172_93180796_93180882_93181690_93181787_93182805_93182895_93184429_93184521_93185690_93185815_93197777
transcript_3894.known	chr1	-	6406	13	FSM	ENSG00000127483.19	ENST00000438032.6	6406	13	0	0	0	0	multi-exon	FALSE	canonical	2	66	junction_12	107.21664853101	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGGTGCCTAGAGTAT	-20784452	True	NA	NA	False	ATTAAA	-22	NA	20787307	20740265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_20745092_20745542_20745657_20747543_20747656_20749722_20749883_20757165_20757257_20765376_20765532_20767583_20767665_20770929_20771074_20773450_20773611_20776596_20776751_20779811_20779912_20780344_20780541_20787194
transcript_38949.known	chr11	-	747	2	FSM	ENSG00000180773.15	ENST00000527743.1	747	2	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAATATTTAGGTAAAC	-93195219	True	NA	NA	False	TATAAA	-3	NA	93197929	93185219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_93185815_93197777
transcript_38953.known	chr11	-	374	3	FSM	ENSG00000166002.7	ENST00000526869.1	374	3	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_1	22	244	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTACGTGGCCACGCG	-93538421	True	NA	NA	False	NA	NA	NA	93543355	93479048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_93479270_93499275_93499349_93543275
transcript_38957.nic	chr11	-	1560	14	NIC	ENSG00000166012.17	novel	1735	14	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	151.020904544594	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTCTAGAAAGTCAGCAT	-93734023	True	NA	-22	True	ATTAAA	-13	NA	93741515	93730282	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_93730448_93730676_93730713_93731149_93731217_93731752_93731800_93732243_93732292_93733086_93733122_93733349_93733398_93734624_93734661_93736140_93736305_93736693_93736752_93737063_93737240_93738108_93738500_93739236_93739332_93741321
transcript_38963.known	chr11	+	3622	13	FSM	ENSG00000042429.12	ENST00000638487.1	3622	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	59.0218297656798	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAAGTCCTTTGTATTTC	93781798	True	NA	-17	True	TTTAAA	-44	NA	93784241	93813268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_93784764_93788000_93788168_93790573_93790794_93793727_93793865_93793950_93794036_93794249_93794440_93794907_93795061_93796409_93796541_93797534_93797720_93801834_93801973_93807517_93807636_93809716_93809877_93811852
transcript_38969.known	chr11	+	5087	12	FSM	ENSG00000042429.12	ENST00000251871.9	5087	12	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_5	15.5881921830978	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTAGTAAGTTCACTTT	93781838	True	NA	NA	False	AATAAA	-17	NA	93784281	93814963	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_93784764_93788000_93788168_93790573_93790794_93793727_93793865_93793950_93794036_93794907_93795061_93796409_93796541_93797534_93797720_93801834_93801973_93807517_93807636_93809716_93809877_93811852
transcript_3897.nic	chr1	-	3954	13	NIC	ENSG00000127483.19	novel	3884	13	NA	NA	-24	25	intron_retention	FALSE	canonical	2	92	junction_12	101.592698501855	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATGAAGCCCAACTACC	-20786680	False	NA	NA	False	ATTAAA	-22	NA	20786690	20743109	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_20745092_20745542_20745657_20747543_20747656_20749722_20749883_20757165_20757257_20765376_20765532_20767583_20767665_20770929_20771074_20773450_20773611_20776596_20776751_20779811_20779912_20780344_20780541_20786185
transcript_38971.known	chr11	+	2137	12	FSM	ENSG00000042429.12	ENST00000639523.1	2137	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	46.0443551874505	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTTAAAATATTACTAACT	93784731	False	NA	-89	True	NA	NA	NA	93784748	93812310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_93784934_93788000_93788168_93790573_93790794_93793727_93793865_93793950_93794036_93794907_93795061_93796409_93796541_93797534_93797720_93801834_93801973_93807517_93807636_93809716_93809877_93811852
transcript_38975.nic	chr11	+	1615	11	ISM	ENSG00000166004.15	ENST00000325212.11	8014	30	-74	38590	-74	-3852	5prime_fragment	TRUE	canonical	2	10	junction_4	6.07947366142827	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAAGGTATTTCTTTTTA	93659735	True	NA	NA	False	GATAAA	-31	NA	93661607	93691768	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_93661775_93666681_93666816_93667606_93667808_93668807_93668933_93669676_93669771_93675570_93675667_93679411_93679553_93683558_93683743_93683963_93684129_93687643_93687866_93691682
transcript_38977.known	chr11	+	2317	11	FSM	ENSG00000042429.12	ENST00000639724.1	2317	11	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_10	46.862031539403	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATAAAGTATGTGGTTT	93781863	True	NA	-21	True	TTTAAA	-24	NA	93784306	93812378	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_93784764_93788000_93788168_93790573_93790794_93793727_93793865_93793950_93794036_93794907_93795061_93796409_93796541_93797534_93797720_93801834_93801973_93807517_93807636_93811852
transcript_38978.known	chr11	+	3235	11	FSM	ENSG00000042429.12	ENST00000639189.1	3235	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	44.7089476503306	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAAATGGAGCTTGTGGG	93781849	True	NA	22	True	AATAAA	-35	NA	93784292	93813307	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_93784764_93788000_93788168_93790573_93790794_93793727_93793865_93793950_93794036_93794907_93795061_93796409_93796541_93801834_93801973_93807517_93807636_93809716_93809877_93811852
transcript_38980.known	chr11	+	2621	11	FSM	ENSG00000042429.12	ENST00000525026.6	2621	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	48.346768247733	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCAAATACCTTTTTTTC	93781849	True	NA	6	True	AATAAA	-19	NA	93784292	93812405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_93784764_93788000_93788168_93790573_93790794_93793727_93794036_93794907_93795061_93796409_93796541_93797534_93797720_93801834_93801973_93807500_93807636_93809716_93809877_93811852
transcript_38991.known	chr11	+	2108	10	FSM	ENSG00000042429.12	ENST00000639596.1	2108	10	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_9	61.9762997313898	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTTAAAATATTACTAACT	93781819	True	NA	-89	True	NA	NA	NA	93784262	93812310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_93784764_93788000_93788168_93790573_93790794_93793727_93793865_93793950_93794036_93794907_93795061_93796409_93796541_93801834_93801973_93807517_93807636_93811852
transcript_38994.known	chr11	+	4163	9	FSM	ENSG00000182919.15	ENST00000354421.8	4163	9	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	23.2647802482637	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCTCTTCTTACTCTTA	93739399	True	NA	NA	False	NA	NA	NA	93741671	93764749	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_93741729_93747296_93747449_93750345_93750445_93753681_93753756_93753935_93754038_93755209_93755387_93757315_93757466_93759741_93759859_93761514
transcript_38999.known	chr11	-	1728	9	FSM	ENSG00000166012.17	ENST00000546088.5	1728	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	235.834124704208	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGCATGTATTTTTGGC	-93728683	False	NA	-11	True	ATTAAA	-24	NA	93736175	93730271	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_93730448_93730676_93730713_93731149_93731217_93731752_93731800_93732243_93732292_93733086_93733122_93733349_93733420_93734624_93734661_93734962
transcript_39.known	ERCC-00099	+	1344	1	FSM	ERCC-00099A	DQ875387	1344	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00099_+_0_1300
transcript_39001.known	chr11	+	4094	8	FSM	ENSG00000182919.15	ENST00000528288.5	4094	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	69.2999985275495	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCTCTTCTTACTCTTA	93739318	True	NA	NA	False	NA	NA	NA	93741590	93764749	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_93741729_93747296_93747449_93750345_93750445_93753681_93753756_93753935_93754038_93755209_93755387_93759741_93759859_93761514
transcript_39003.known	chr11	+	2417	8	FSM	ENSG00000182919.15	ENST00000617482.4	2417	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	62.6542178979848	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTCCAGACAAAATAATATT	93739321	True	NA	24	True	AATAAA	-34	NA	93741593	93763102	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_93741729_93747296_93747449_93750345_93750445_93753681_93753756_93753935_93754038_93757315_93757466_93759741_93759859_93761514
transcript_39005.known	chr11	+	2442	8	FSM	ENSG00000182919.15	ENST00000540113.5	2442	8	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	69.3929950002307	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTCCAGACAAAATAATATT	93739321	True	NA	24	True	AATAAA	-34	NA	93741593	93763102	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_93741729_93750345_93750445_93753681_93753756_93753935_93754038_93755209_93755387_93757315_93757466_93759741_93759859_93761514
transcript_39007.known	chr11	-	1632	6	FSM	ENSG00000166012.17	ENST00000448108.7	1632	6	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_5	28.6034962897895	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTAGTAGCTGGGATTACA	-93734003	True	NA	NA	False	NA	NA	NA	93741495	93735566	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_93736305_93736693_93736752_93737063_93737240_93738108_93738500_93739236_93739332_93741321
transcript_39012.nic	chr11	+	553	4	ISM	ENSG00000166004.15	ENST00000325212.11	8014	30	-74	61500	-74	-26762	5prime_fragment	FALSE	canonical	3	21	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGATTTGAGGCATAAAGA	93659735	True	NA	NA	False	AAGAAA	-2	NA	93661607	93668858	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_93661775_93666681_93666816_93667606_93667808_93668807
transcript_39013.nic	chr11	+	605	4	ISM	ENSG00000166004.15	ENST00000325212.11	8014	30	-74	61448	-74	-26710	5prime_fragment	FALSE	canonical	3	21	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATTACTGAAACAAAAAACC	93659735	True	NA	NA	False	CATAAA	-35	NA	93661607	93668910	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_93661775_93666681_93666816_93667606_93667808_93668807
transcript_39018.nic	chr11	-	621	3	ISM	ENSG00000166012.17	ENST00000448108.7	1632	6	-133	2714	-133	-172	5prime_fragment	FALSE	canonical	3	255	junction_2	29	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAGGTACCAGCCAACAG	NA	False	NA	NA	False	TATAAA	-12	NA	93741628	93738280	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_93738500_93739236_93739332_93741321
transcript_39020.known	chr11	+	2278	2	FSM	ENSG00000042429.12	ENST00000530819.1	2278	2	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGCCA	93781838	True	NA	NA	False	NA	NA	NA	93784281	93789796	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_93784764_93788000
transcript_39022.known	chr11	-	538	2	FSM	ENSG00000166012.17	ENST00000529508.1	538	2	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGCTGTGTTTGTTTTAC	-93734002	True	NA	NA	False	NA	NA	NA	93741494	93738966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_93739332_93741321
transcript_39023.known	chr11	+	353	1	FSM	ENSG00000254911.3	ENST00000530422.1	353	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTGACAACTGCTGGGG	93721496	True	NA	7	True	NA	NA	NA	93721512	93721865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_93721500_93721900
transcript_39024.known	chr11	-	334	3	FSM	ENSG00000166012.17	ENST00000532235.1	334	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	126.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGGTGAAGATTTAGAAAA	-93733984	True	NA	NA	False	AATGAA	-2	NA	93741476	93737155	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_93737240_93739236_93739332_93741321
transcript_39025.known	chr11	-	3056	4	FSM	ENSG00000214376.6	ENST00000409977.2	3056	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGTCCTTTGTGTGTG	-93850597	True	NA	NA	False	AATAAA	-14	NA	93850618	93818231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_93820613_93820742_93820884_93820996_93821324_93850411
transcript_39032.known	chr11	+	2852	5	FSM	ENSG00000110218.9	ENST00000227638.8	2852	5	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	14.5838095160352	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGTAAGCTTATTTCAT	94126114	True	NA	10	True	AATAAA	-23	NA	94128840	94181968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_94129494_94153490_94153631_94178368_94178593_94179601_94180258_94180789
transcript_39037.known	chr11	+	570	2	FSM	ENSG00000250519.7	ENST00000515097.2	570	2	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACCATATCGCTAGAGAGA	94238082	True	NA	NA	False	NA	NA	NA	94238149	94279206	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_94238278_94278764
transcript_39040.nic	chr11	-	2798	20	NIC	ENSG00000020922.13	novel	6841	20	NA	NA	-4	137	combination_of_known_junctions	FALSE	canonical	3	122	junction_19	39.4462360709638	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATGTCTAAATTCACTGT	-94490189	True	NA	-3	True	AGTAAA	-15	NA	94493853	94419728	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_94420182_94429910_94429987_94435831_94435900_94437176_94437236_94445809_94445894_94447218_94447439_94456275_94456339_94459407_94459582_94460935_94461037_94464112_94464240_94467812_94467894_94470470_94470643_94471573_94471760_94476288_94476404_94478734_94478877_94479673_94479762_94485923_94486085_94490832_94490966_94492781_94492907_94493683
transcript_39041.known	chr11	-	6841	20	FSM	ENSG00000020922.13	ENST00000323929.8	6841	20	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_19	60.246722649682	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGTAAAGTGATTTTTAAA	-94490180	True	NA	-24	True	AATAAA	-35	NA	94493844	94415569	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_94420182_94429910_94429987_94435831_94435900_94437176_94437236_94445809_94445894_94447218_94447439_94456275_94456339_94459407_94459582_94460935_94461037_94464112_94464240_94467812_94467894_94470470_94470643_94471573_94471760_94476288_94476404_94478734_94478877_94479673_94479762_94485923_94486085_94490832_94490966_94492781_94492907_94493790
transcript_39042.nic	chr11	-	2661	20	NIC	ENSG00000020922.13	novel	6841	20	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	122	junction_19	39.4462360709638	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTATGTCAGTATTTT	-94490189	True	NA	NA	False	AATAAA	-31	NA	94493853	94419865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_94420182_94429910_94429987_94435831_94435900_94437176_94437236_94445809_94445894_94447218_94447439_94456275_94456339_94459407_94459582_94460935_94461037_94464112_94464240_94467812_94467894_94470470_94470643_94471573_94471760_94476288_94476404_94478734_94478877_94479673_94479762_94485923_94486085_94490832_94490966_94492781_94492907_94493683
transcript_39047.known	chr11	-	2588	19	FSM	ENSG00000020922.13	ENST00000323977.7	2588	19	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	63.281557783888	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTCATAATGAAAAACTATG	-94490210	True	NA	NA	False	AATAAA	-21	NA	94493874	94419875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_94420182_94429910_94429987_94435831_94435900_94437176_94437236_94447218_94447439_94456275_94456339_94459407_94459582_94460935_94461037_94464112_94464240_94467812_94467894_94470470_94470643_94471573_94471760_94476288_94476404_94478734_94478877_94479673_94479762_94485923_94486085_94490832_94490966_94492781_94492907_94493683
transcript_39051.nic	chr11	-	1721	14	ISM	ENSG00000020922.13	ENST00000323929.8	6841	20	-30	40737	0	-10568	5prime_fragment	FALSE	canonical	0	0	junction_13	59.8496142958411	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTAATGAAGAAGATGATG	-94490210	True	NA	NA	False	NA	NA	NA	94493874	94456306	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_94456339_94459407_94459582_94460935_94461037_94464112_94464240_94467812_94467894_94470470_94470643_94471573_94471760_94476288_94476404_94478734_94478877_94479673_94479762_94485923_94486085_94490832_94490966_94492781_94492907_94493790
transcript_39054.nic	chr11	-	1411	11	ISM	ENSG00000020922.13	ENST00000323929.8	6841	20	-30	48546	0	11100	5prime_fragment	FALSE	canonical	0	0	junction_10	67.764961447639	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTAAGCTAGTTATTTTT	-94490210	True	NA	NA	False	NA	NA	NA	94493874	94464115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_94464240_94467812_94467894_94470470_94470643_94471573_94471760_94476288_94476404_94478734_94478877_94479673_94479762_94485923_94486085_94490832_94490966_94492781_94492907_94493790
transcript_39056.known	chr11	-	2604	20	FSM	ENSG00000020922.13	ENST00000393241.8	2604	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	75.0080697413004	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTTCATAATGAAAAACTA	-94490184	True	NA	NA	False	AATAAA	-19	NA	94493848	94419877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_94420182_94429910_94429987_94435831_94435900_94437176_94437236_94445809_94445891_94447218_94447439_94456275_94456339_94459407_94459582_94460935_94461037_94464112_94464240_94467812_94467894_94470470_94470643_94471573_94471760_94476288_94476404_94478734_94478877_94479673_94479762_94485923_94486085_94490832_94490966_94492781_94492907_94493720
transcript_39057.known	chr11	+	1908	3	FSM	ENSG00000168876.9	ENST00000544612.6	1908	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	2.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAGGCATGAATTCATTT	94492953	True	NA	9	True	AATAAA	-20	NA	94493983	94499578	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_94494036_94496603_94496952_94498070
transcript_39058.known	chr11	+	573	3	FSM	ENSG00000168876.9	ENST00000540349.1	573	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	42	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAACACTAGGGATGAAGA	94492948	True	NA	NA	False	NA	NA	NA	94493978	94498112	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_94494036_94496603_94497078_94498070
transcript_39059.known	chr11	+	760	3	FSM	ENSG00000168876.9	ENST00000534911.1	760	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	31	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATAATACCAGAGTGGCT	94492953	True	NA	NA	False	NA	NA	NA	94493983	94498263	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_94494036_94496603_94497119_94498070
transcript_39061.known	chr11	+	3002	2	FSM	ENSG00000168876.9	ENST00000544253.1	3002	2	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAGGCATGAATTCATT	94492977	True	NA	8	True	AATAAA	-19	NA	94494007	94499577	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_94494036_94496603
transcript_3909.nic	chr1	-	3834	12	NIC	ENSG00000127483.19	novel	6406	13	NA	NA	-24	0	intron_retention	FALSE	canonical	2	116	junction_11	90.8756302057337	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTGAACCGTAGCTTAT	-20787337	False	NA	-24	True	AATAAA	-16	NA	20787347	20742681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_20745092_20745542_20745657_20747543_20747656_20749722_20749883_20757165_20757257_20765376_20765532_20767583_20767665_20770929_20771074_20773450_20773611_20776596_20776751_20779811_20779912_20787194
transcript_39106.nnic	chr11	+	1396	2	NIC	ENSG00000255666.7	novel	2753	12	NA	NA	-6	-101	intron_retention	FALSE	canonical	3	121	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTTTTTAGACTATACAA	94632414	True	NA	-14	True	AATAAA	-1	NA	94641900	94648473	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_94642158_94647334
transcript_39110.nnic	chr11	+	373	2	NNC	ENSG00000255666.7	novel	532	5	NA	NA	-368	-1003	intron_retention	FALSE	canonical	3	131	junction_1	0	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACAACGTGAGTTAAAATG	94647082	False	NA	NA	False	AATAGA	-13	NA	94647110	94647571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_94647247_94647334
transcript_39114.nic	chr11	+	6171	2	ISM	ENSG00000255666.7	ENST00000542479.1	532	5	2873	-5832	2873	4577	3prime_fragment	FALSE	canonical	3	540	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTCTGTTTGAGTGTTT	94645439	True	NA	30	True	AATAAA	-18	NA	94650351	94657461	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_94650538_94651476
transcript_39116.nic	chr11	+	3776	13	NIC	ENSG00000166025.18	novel	653	5	NA	NA	-27958	4379	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	34.4645550610414	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGATCATCCTTGGAATA	NA	False	NA	7	True	TATAAA	-15	NA	94740383	94871144	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_94740989_94795010_94795161_94799389_94800312_94821529_94821822_94830049_94830195_94831451_94831542_94850113_94850260_94853932_94854083_94859524_94859716_94864734_94864861_94865941_94866169_94869197_94869474_94870688
transcript_39117.known	chr11	+	8980	13	FSM	ENSG00000166025.18	ENST00000433060.3	8980	13	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	20.2791285699252	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCACTTAATGTTTTGCTT	94762398	True	NA	93	True	AATAAA	-18	NA	94768355	94876748	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_94768561_94795010_94795161_94799389_94800312_94821529_94821822_94830049_94830195_94831451_94831542_94850113_94850260_94853932_94854083_94859524_94859716_94864734_94864861_94865941_94866169_94869197_94869474_94870688
transcript_39122.known	chr11	+	8844	12	FSM	ENSG00000166025.18	ENST00000317829.12	8844	12	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	31.529076177841	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCACTTAATGTTTTGCTT	94762384	True	NA	93	True	AATAAA	-18	NA	94768341	94876748	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_94768561_94799389_94800312_94821529_94821822_94830049_94830195_94831451_94831542_94850113_94850260_94853932_94854083_94859524_94859716_94864734_94864861_94865941_94866169_94869197_94869474_94870688
transcript_39136.known	chr11	-	1522	7	FSM	ENSG00000150316.12	ENST00000279839.8	1522	7	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_1	39.7058629871655	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTATCTTGGAGGAT	-94961182	True	NA	0	True	AATAAA	-17	NA	94973556	94962619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_94963515_94966294_94966414_94969988_94970097_94970976_94971066_94971374_94971488_94972054_94972194_94973497
transcript_39142.nic	chr11	-	521	5	ISM	ENSG00000150316.12	ENST00000279839.8	1522	7	-36	7392	-6	476	5prime_fragment	FALSE	canonical	3	658	junction_1	36.7457480533463	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTGAAGAGCAGGCCAGG	-94961218	True	NA	23	True	ATTAAA	-8	NA	94973592	94970011	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_94970097_94970976_94971066_94971374_94971488_94972054_94972194_94973497
transcript_39143.known	chr11	-	905	4	FSM	ENSG00000150316.12	ENST00000539856.5	905	4	0	0	0	0	multi-exon	FALSE	canonical	3	717	junction_3	15.06283137026	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCTGTGGGACCCTAG	-94961198	True	NA	NA	False	NA	NA	NA	94973572	94970487	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_94971066_94971374_94971488_94972054_94972194_94973497
transcript_39145.known	chr11	-	1113	6	FSM	ENSG00000150316.12	ENST00000621358.4	1113	6	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_1	38.1439379194126	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTAAAGACTGTAAAACGT	-94961212	True	NA	-40	True	ATTAAA	-21	NA	94973586	94963367	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_94963515_94966294_94966414_94969988_94970097_94970976_94971488_94972054_94972194_94973497
transcript_39146.known	chr11	+	2951	3	FSM	ENSG00000186280.7	ENST00000335080.6	2951	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	2.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTTCAAATATTGTGT	94973440	True	NA	18	True	ATTAAA	-25	NA	94973708	94999519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_94974069_94975653_94975749_94997023
transcript_3915.nic	chr1	-	3406	12	NIC	ENSG00000127483.19	novel	6406	13	NA	NA	-24	25	intron_retention	FALSE	canonical	2	116	junction_11	90.8756302057337	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATGAAGCCCAACTACC	-20787337	False	NA	NA	False	ATTAAA	-22	NA	20787347	20743109	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_20745092_20745542_20745657_20747543_20747656_20749722_20749883_20757165_20757257_20765376_20765532_20767583_20767665_20770929_20771074_20773450_20773611_20776596_20776751_20779811_20779912_20787194
transcript_39150.known	chr11	+	560	2	FSM	ENSG00000263465.5	ENST00000638426.1	560	2	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTCTCAGAATAAAATTAGA	95068003	False	NA	-25	True	NA	NA	NA	95068057	95069088	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_95068184_95068654
transcript_39153.known	chr11	+	4651	2	FSM	ENSG00000149218.5	ENST00000278505.5	4651	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGTTAGCAGTTCTGTAAA	95089505	True	NA	5	True	AATAAA	-15	NA	95089845	95132645	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_95090228_95128376
transcript_39156.known	chr11	+	2211	5	FSM	ENSG00000245552.8	ENST00000543150.3	2215	5	0	4	0	-4	multi-exon	FALSE	canonical	0	0	junction_1	3.35410196624968	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTTTCTGGCAGAATCT	95230382	False	NA	0	True	AATAAA	-12	NA	95230395	95234387	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_95230496_95231124_95232177_95232589_95232675_95232879_95232920_95233453
transcript_39159.known	chr11	-	2329	18	FSM	ENSG00000087053.20	ENST00000481642.6	2329	18	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_14	170.174223770776	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACTGTAAGATCAGGGGC	-95924111	False	NA	NA	False	NA	NA	NA	95924123	95835289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95866402_95866487_95887611_95887685_95888155_95888262_95914241_95914313_95923874
transcript_39161.known	chr11	-	3536	18	FSM	ENSG00000087053.20	ENST00000675489.1	3536	18	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_14	167.224131137232	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTTCTTGTCCAAAGTT	-95918656	True	NA	-14	True	ATTAAA	-24	NA	95924093	95834091	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95882373_95882497_95887611_95887685_95888155_95888262_95914241_95914313_95923874
transcript_39167.known	chr11	-	3457	17	FSM	ENSG00000087053.20	ENST00000676261.1	3457	17	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_14	154.218544199457	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTTTAAACTTTGTTCT	-95918661	True	NA	-25	True	ATTAAA	-13	NA	95924098	95834102	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95882373_95882497_95888155_95888262_95914241_95914313_95923874
transcript_39168.known	chr11	-	4629	17	FSM	ENSG00000087053.20	ENST00000675196.1	4629	17	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_16	162.888849660589	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	-95923904	False	NA	-6	True	AATAAA	-16	NA	95923916	95832881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95887611_95887685_95888155_95888262_95914241_95914313_95923691
transcript_39169.known	chr11	-	3420	17	FSM	ENSG00000087053.20	ENST00000409459.5	3420	17	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_13	140.234722318511	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTGTCCAAAGTTGCCA	-95918659	True	NA	-10	True	ATTAAA	-28	NA	95924096	95834087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95887611_95887685_95888155_95888262_95914241_95914313_95923874
transcript_39176.known	chr11	-	4741	16	FSM	ENSG00000087053.20	ENST00000675848.1	4741	16	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_12	133.088374982774	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	-95924111	False	NA	-6	True	AATAAA	-16	NA	95924123	95832881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865439_95865677_95888155_95888262_95914241_95914313_95923874
transcript_39179.known	chr11	-	4632	16	FSM	ENSG00000087053.20	ENST00000676177.1	4632	16	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_14	159.034363861679	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	-95924111	False	NA	-6	True	AATAAA	-16	NA	95924123	95832881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95882373_95882497_95888155_95888262_95923874
transcript_39180.known	chr11	-	4582	16	FSM	ENSG00000087053.20	ENST00000675320.1	4582	16	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_13	144.309697833822	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	-95924111	False	NA	-6	True	AATAAA	-16	NA	95924123	95832881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95887611_95887685_95888155_95888262_95923874
transcript_39181.known	chr11	-	4504	16	FSM	ENSG00000087053.20	ENST00000676166.1	4504	16	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_15	122.425850574496	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	-95923852	False	NA	-6	True	AATAAA	-16	NA	95923864	95832881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95888155_95888262_95914241_95914313_95923691
transcript_39182.known	chr11	-	3350	16	FSM	ENSG00000087053.20	ENST00000352297.11	3350	16	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_15	80.6985061131177	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTGTCCAAAGTTGCC	-95918663	True	NA	-11	True	ATTAAA	-27	NA	95924100	95834088	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95888155_95888262_95914241_95914313_95923874
transcript_39186.known	chr11	-	4506	16	FSM	ENSG00000087053.20	ENST00000676440.1	4506	16	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_15	165.338521423976	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	-95923852	False	NA	-6	True	AATAAA	-16	NA	95923864	95832881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95887611_95887685_95888155_95888262_95923691
transcript_39190.known	chr11	-	4670	15	FSM	ENSG00000087053.20	ENST00000675922.1	4670	15	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_12	136.763929634168	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	-95924111	False	NA	-6	True	AATAAA	-16	NA	95924123	95832881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865439_95865677_95888155_95888262_95923874
transcript_39191.known	chr11	-	4387	15	FSM	ENSG00000087053.20	ENST00000675454.1	4387	15	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_14	119.090858814022	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	-95923806	False	NA	-6	True	AATAAA	-16	NA	95923818	95832881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95888155_95888262_95923691
transcript_39192.known	chr11	-	4519	15	FSM	ENSG00000087053.20	ENST00000676388.1	4519	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_12	136.127941020683	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	-95924111	False	NA	-6	True	AATAAA	-16	NA	95924123	95832881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865590_95865677_95888155_95888262_95923874
transcript_39193.known	chr11	-	4474	15	FSM	ENSG00000087053.20	ENST00000675652.1	4474	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_13	133.458087894626	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	-95924111	False	NA	-6	True	AATAAA	-16	NA	95924123	95832881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95914241_95914313_95923874
transcript_39198.known	chr11	-	4403	14	FSM	ENSG00000087053.20	ENST00000676272.1	4403	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	129.190882122806	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	-95924111	False	NA	-6	True	AATAAA	-16	NA	95924123	95832881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95923874
transcript_39203.known	chr11	-	4601	16	FSM	ENSG00000087053.20	ENST00000393223.8	4601	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	128.47301489245	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	-95924111	False	NA	-6	True	AATAAA	-16	NA	95924123	95832881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95888155_95888262_95914241_95914334_95923874
transcript_39204.known	chr11	-	4674	17	FSM	ENSG00000087053.20	ENST00000675362.1	4674	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	166.788402155995	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	-95924111	False	NA	-6	True	AATAAA	-16	NA	95924123	95832881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95887611_95887685_95888155_95888262_95914241_95914334_95923874
transcript_39209.known	chr11	+	3141	11	FSM	ENSG00000166037.11	ENST00000325542.10	3141	11	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_7	49.0758596460622	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTAGTGGCTCTGAGTCCT	95779969	True	NA	27	True	ATTAAA	-21	NA	95790497	95832693	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_95790744_95799231_95799389_95812931_95813112_95813467_95813590_95817786_95817904_95818826_95818905_95821870_95821979_95822498_95822577_95827785_95828028_95829186_95829332_95831025
transcript_39213.known	chr11	-	3823	11	FSM	ENSG00000077458.13	ENST00000398187.6	3823	11	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	51.6898442636462	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTATTAGTTTTCAATGG	-95789575	False	NA	-4	True	AATAAA	-16	NA	95789615	95768952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_95771651_95775921_95776024_95778821_95778958_95779077_95779136_95779606_95779688_95779878_95779927_95783064_95783265_95786118_95786275_95787623_95787679_95788498_95788564_95789391
transcript_39217.known	chr11	+	3098	10	FSM	ENSG00000166037.11	ENST00000325486.9	3098	10	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_7	118.12799084985	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTAGTGGCTCTGAGTC	95779932	True	NA	25	True	ATTAAA	-19	NA	95790460	95832691	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_95790744_95799231_95799389_95812931_95813112_95813467_95813590_95817786_95817904_95818826_95818905_95821870_95821979_95827785_95828028_95829186_95829332_95831025
transcript_39222.known	chr11	-	2546	10	FSM	ENSG00000077458.13	ENST00000536839.1	2546	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	50.2912504969126	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCTTCTCTTAATAATTT	-95789521	False	NA	NA	False	TTTAAA	-29	NA	95789561	95770114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_95771651_95775921_95776024_95778821_95778955_95779606_95779688_95779878_95779927_95783064_95783265_95786118_95786275_95787623_95787679_95788498_95788564_95789391
transcript_39229.nic	chr11	+	1514	8	NIC	ENSG00000166037.11	novel	2084	7	NA	NA	49	-1259	combination_of_known_junctions	FALSE	canonical	3	43	junction_2	187.838836696325	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGTCAAAACCACCAGAAA	95789899	True	NA	38	True	ATTAAA	-6	NA	95790013	95821956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_95790744_95795515_95795560_95799231_95799389_95812931_95813112_95813467_95813590_95817786_95817904_95818826_95818905_95821870
transcript_39237.known	chr11	+	2084	7	FSM	ENSG00000166037.11	ENST00000538658.5	2084	7	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_1	40.773425441361	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTTTATATTTATTTA	95780130	False	NA	14	True	AGTAAA	-18	NA	95790658	95823215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_95790744_95799231_95799389_95812931_95813112_95813467_95813590_95817786_95817904_95818826_95818905_95821870
transcript_39242.known	chr11	+	870	6	FSM	ENSG00000166037.11	ENST00000541365.5	870	6	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_1	181.02927939977	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAAGTTAAAATGTGAGAA	95779993	True	NA	NA	False	NA	NA	NA	95790521	95818903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_95790744_95799236_95799389_95812931_95813112_95813467_95813590_95817786_95817904_95818826
transcript_39244.nic	chr11	+	781	5	ISM	ENSG00000166037.11	ENST00000538658.5	2084	7	-177	5369	-16	-57	5prime_fragment	FALSE	canonical	3	409	junction_1	46.4784896484384	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATCTTCTTGAACAGGA	95779953	True	NA	NA	False	NA	NA	NA	95790481	95817846	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_95790744_95799231_95799389_95812931_95813112_95813467_95813590_95817786
transcript_39246.nic	chr11	+	635	4	ISM	ENSG00000166037.11	ENST00000538658.5	2084	7	-160	9695	1	0	5prime_fragment	FALSE	canonical	3	409	junction_1	49.9355139710763	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATTGGAATACATGCGAAA	95779970	True	NA	NA	False	AATAAA	-19	NA	95790498	95813520	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_95790744_95799231_95799389_95812931_95813112_95813467
transcript_39252.known	chr11	-	2817	11	FSM	ENSG00000149231.16	ENST00000679856.1	2817	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	52.1237949500993	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAACAAATGAACCCTGT	-96389925	False	NA	NA	False	AATAAA	-16	NA	96389936	96352778	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_96353715_96358992_96359179_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96385936_96386021_96386253_96386294_96387529_96387614_96389843
transcript_39253.known	chr11	-	2611	10	FSM	ENSG00000149231.16	ENST00000646050.1	2611	10	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_2	40.1149582642586	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGTAATAAAGTAAAATGG	-96389910	False	NA	NA	False	NA	NA	NA	96389921	96352804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_96353715_96358992_96359098_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96386253_96386294_96387529_96387614_96389843
transcript_39255.known	chr11	-	3156	10	FSM	ENSG00000149231.16	ENST00000679708.1	3156	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_9	35.6744539785358	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAACAAATGAACCCTGT	-96387752	True	NA	NA	False	AATAAA	-16	NA	96389880	96352778	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_96353715_96358992_96359179_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96386253_96386294_96387529_96387614_96389364
transcript_39256.known	chr11	-	2715	10	FSM	ENSG00000149231.16	ENST00000646818.2	2715	10	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_9	21.7124871621248	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGAACCCTGTGTGTTC	-96387784	True	NA	NA	False	AATAAA	-22	NA	96389912	96352772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_96353715_96358992_96359179_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96386253_96386294_96387529_96387614_96389843
transcript_39261.known	chr11	-	3972	5	FSM	ENSG00000149231.16	ENST00000530106.2	3972	5	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_4	28.7608675112556	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCATGTGCAGGTTTTTC	NA	False	NA	-7	True	AATAAA	-12	NA	96389956	96380538	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_96383474_96383961_96384762_96386253_96386294_96387529_96387614_96389843
transcript_39266.nic	chr11	-	768	4	ISM	ENSG00000149231.16	ENST00000530106.2	3972	5	33	3659	0	-237	5prime_fragment	FALSE	canonical	3	78	junction_3	26.8824602048746	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTATCCTCTGTGATGTGT	-96389912	False	NA	15	True	AATAGA	-45	NA	96389923	96384197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_96384762_96386253_96386294_96387529_96387614_96389843
transcript_39268.known	chr11	+	3140	2	FSM	ENSG00000183340.7	ENST00000332349.5	3140	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATTTTTTAAAGGTTTAA	96389009	True	NA	6	True	AATAAA	-20	NA	96390012	96393561	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_96390074_96390482
transcript_39273.nnic	chr11	+	612	3	NNC	ENSG00000254587.2	novel	1647	4	NA	NA	-2336	-117205	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	4	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTCTGAAATCTTTCATG	96587904	True	NA	10	True	AATAAA	-20	NA	96587980	96596617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_96588234_96590315_96590456_96596398
transcript_39277.nnic	chr11	+	472	2	Intergenic	novelGene_1	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTCTGAAATCTTTCATG	96587904	True	NA	10	True	AATAAA	-20	NA	96587980	96596617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Intergenic_chr11_+_96588234_96596398
transcript_39278.known	chr11	+	8156	24	FSM	ENSG00000165895.19	ENST00000298815.13	8156	24	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_6	13.023898347513	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTCTTTGTACTTGAAG	100685346	True	NA	20	True	AATAAA	-20	NA	100687287	100993941	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_100687833_100770342_100770439_100795104_100795167_100859553_100859626_100913451_100913554_100921493_100921605_100933155_100933261_100936202_100936333_100941783_100941885_100943758_100943869_100948456_100948536_100949916_100949957_100959882_100959946_100960914_100960990_100961683_100961769_100962408_100962468_100965670_100965777_100973174_100973335_100974458_100974604_100976056_100976438_100976814_100976972_100978986_100979050_100987512_100987593_100988712
transcript_39283.known	chr11	-	1865	2	FSM	ENSG00000248027.1	ENST00000501397.1	1865	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGTGTCTGTCTTATTT	NA	False	NA	NA	False	TATAAA	-21	NA	100687955	100684161	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_100685704_100687632
transcript_39284.known	chr11	-	4691	13	FSM	ENSG00000137672.13	ENST00000344327.8	4691	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	1.60511335702152	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTGACAGTATTTGAAT	-101583995	True	NA	NA	False	CATAAA	-17	NA	101584007	101451563	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_101453107_101453649_101453726_101455017_101455102_101469426_101469502_101471182_101471387_101472136_101472333_101473508_101473774_101476300_101476535_101482948_101483166_101488936_101489102_101491555_101491739_101504023_101504799_101583333
transcript_39288.known	chr11	-	2448	11	FSM	ENSG00000137672.13	ENST00000348423.8	2448	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	1.8	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCGAAGACTTCCTTAGAAA	-101583491	False	NA	NA	False	AATAGA	-4	NA	101583503	101452954	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_101453107_101453649_101453726_101455017_101455102_101469426_101469502_101471182_101471387_101472136_101472333_101473508_101473774_101476300_101476535_101482948_101483166_101504023_101504799_101583333
transcript_39291.known	chr11	+	2193	7	FSM	ENSG00000137691.13	ENST00000434758.7	2193	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_6	9.0921211313239	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGAAATGTCTGTTTGC	102047329	True	NA	NA	False	CATAAA	-14	NA	102047436	102084554	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_102047581_102047814_102047897_102058879_102058956_102066484_102066652_102075872_102076046_102081214_102081282_102083070
transcript_39293.known	chr11	+	845	6	FSM	ENSG00000137691.13	ENST00000526781.5	845	6	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_5	6.72309452558864	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTTTGGAGAACAATT	102047347	True	NA	NA	False	ATTAAA	-16	NA	102047454	102081435	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_102047581_102047814_102047897_102058879_102058956_102066484_102066652_102075872_102076046_102081214
transcript_39294.known	chr11	+	520	4	FSM	ENSG00000137691.13	ENST00000534360.1	520	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	14.6363322667334	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAATTACACAACATCATT	102047350	True	NA	NA	False	AATAAA	-19	NA	102047457	102076111	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_102047581_102047814_102047897_102058879_102058956_102075872
transcript_39295.known	chr11	+	5398	9	FSM	ENSG00000137693.14	ENST00000615667.4	5398	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	42.3805306125348	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTTGTTTTTAACAATT	102107959	False	NA	0	True	AATATA	-19	NA	102110460	102233423	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_102111170_102114143_102114395_102162455_102162572_102186017_102186132_102205892_102206087_102209516_102209565_102223621_102223753_102227468_102227582_102229701
transcript_39297.known	chr11	+	5350	8	FSM	ENSG00000137693.14	ENST00000537274.5	5350	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	40.2836878922981	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTTGTTTTTAACAATT	102107959	False	NA	0	True	AATATA	-19	NA	102110460	102233423	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_102111170_102114143_102114395_102162455_102162572_102186017_102186132_102205892_102206087_102223621_102223753_102227468_102227582_102229701
transcript_39298.known	chr11	+	5284	8	FSM	ENSG00000137693.14	ENST00000345877.6	5284	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	51.2902902853066	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTTGTTTTTAACAATT	102107959	False	NA	0	True	AATATA	-19	NA	102110460	102233423	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_102111170_102114143_102114395_102162455_102162572_102205892_102206087_102209516_102209565_102223621_102223753_102227468_102227582_102229701
transcript_3930.known	chr1	-	572	5	FSM	ENSG00000127483.19	ENST00000417710.5	572	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_4	122.439781117086	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAGAAGAAAGTGAAAAAAA	-20786273	False	NA	NA	False	AAGAAA	-2	NA	20786283	20773586	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_20773611_20776596_20776751_20779811_20779912_20780344_20780541_20786185
transcript_39300.known	chr11	-	631	1	FSM	ENSG00000277459.1	ENST00000614441.1	631	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATTTTGTAATTGTTTC	-102110410	False	NA	-5	True	AATAAA	-23	NA	102110457	102109826	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_102109800_102110500
transcript_39307.known	chr11	+	2617	10	FSM	ENSG00000110330.10	ENST00000532672.5	2617	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	94.1617992842344	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTGTTACCAGAATATTT	102344613	True	NA	24	True	AATAAA	-14	NA	102347246	102378669	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_102347377_102348597_102348765_102349877_102350750_102350843_102350944_102362895_102362975_102363667_102363717_102368305_102368549_102377495_102377751_102377856_102377899_102377989
transcript_39308.nic	chr11	+	2527	10	NIC	ENSG00000110330.10	novel	2617	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	94.1617992842344	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTGTTACCAGAATATTT	102344580	True	NA	24	True	AATAAA	-14	NA	102347213	102378669	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_102347377_102348597_102348765_102350000_102350750_102350843_102350944_102362895_102362975_102363667_102363717_102368305_102368549_102377495_102377751_102377856_102377899_102377989
transcript_39309.nnic	chr11	+	2182	10	NIC	ENSG00000110330.10	novel	2617	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	94.1617992842344	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTGTTACCAGAATATTT	102344580	True	NA	24	True	AATAAA	-14	NA	102347213	102378669	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_102347377_102348597_102348765_102350345_102350750_102350843_102350944_102362895_102362975_102363667_102363717_102368305_102368549_102377495_102377751_102377856_102377899_102377989
transcript_39315.known	chr11	+	3764	9	FSM	ENSG00000110330.10	ENST00000227758.7	3764	9	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_4	26.2032321479622	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTTACCAGAATATTTT	102344580	True	NA	25	True	AATAAA	-15	NA	102347213	102378670	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_102347377_102348597_102350750_102350843_102350944_102362895_102362975_102363667_102363717_102368305_102368549_102377495_102377751_102377856_102377899_102377989
transcript_39326.known	chr11	-	3304	5	FSM	ENSG00000152558.15	ENST00000398136.7	3304	5	0	0	0	0	multi-exon	FALSE	canonical	3	710	junction_1	23.4347498386477	238	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAAGTGTGTGATTTTG	-102438326	True	NA	-7	True	AATAAA	-19	NA	102452765	102396331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_102398892_102401538_102401693_102401915_102402207_102448811_102448869_102452523
transcript_39328.known	chr11	+	692	2	FSM	ENSG00000255337.1	ENST00000528717.1	692	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATCAATAAAAATCATCC	102452850	True	NA	-19	True	NA	NA	NA	102452918	102462008	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_102453050_102461447
transcript_39332.known	chr11	-	1535	8	FSM	ENSG00000137692.12	ENST00000531571.5	1535	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	414.101387565501	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTGACAAAGGCCTTAAAG	-103064923	True	NA	-31	True	AATAAA	-10	NA	103092161	103062097	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_103062415_103064274_103064378_103066268_103066374_103066458_103066568_103082747_103082840_103083255_103083327_103089226_103089319_103091515
transcript_39334.known	chr11	-	1310	8	FSM	ENSG00000137692.12	ENST00000529281.5	1310	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_7	402.000304599336	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGACTGAATATTGAAGTT	-103064939	True	NA	-29	True	NA	NA	NA	103092177	103062170	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_103062415_103064274_103064378_103066268_103066374_103066458_103066568_103082747_103082840_103083255_103083327_103089226_103089319_103091683
transcript_39335.known	chr11	-	12675	8	FSM	ENSG00000137692.12	ENST00000260247.10	12675	8	0	0	0	0	multi-exon	FALSE	canonical	3	1058	junction_5	68.1007656764172	1409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCAGTAATCTTTTGTGT	-103064922	True	NA	NA	False	AATAAA	-42	NA	103092160	103050685	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_103062415_103064274_103064378_103066268_103066374_103066458_103066568_103082747_103082840_103083255_103083327_103089226_103089319_103091786
transcript_39342.known	chr11	-	727	7	FSM	ENSG00000137692.12	ENST00000529294.5	727	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_6	545.867708841213	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAATGCAAACCTTTCA	-103091850	False	NA	NA	False	AAAAAG	-31	NA	103091861	103062345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_103062415_103064274_103064378_103066268_103066374_103066458_103066568_103083255_103083327_103089226_103089319_103091683
transcript_39343.nic	chr11	-	1231	7	NIC	ENSG00000137692.12	novel	1535	8	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_4	421.289554687615	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTGACAAAGGCCTTAAAG	-103092209	False	NA	-31	True	AATAAA	-10	NA	103092220	103062097	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_103062415_103064274_103064378_103066268_103066374_103066458_103066568_103083255_103083327_103089226_103089319_103091786
transcript_39349.nic	chr11	+	3280	22	ISM	ENSG00000187240.17	ENST00000375735.7	13683	89	131	326395	35	-2634	5prime_fragment	FALSE	canonical	2	4	junction_9	2.60907191081957	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGTTTGATGATCTTGAA	103107841	True	NA	NA	False	AATAAA	-12	NA	103109556	103153468	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_103109770_103113536_103113708_103114102_103114239_103115176_103115296_103116569_103116715_103117630_103117864_103120446_103120582_103120688_103120803_103120924_103121037_103121371_103121497_103122824_103123001_103125099_103125296_103128909_103129006_103133554_103133708_103134320_103134420_103135494_103135635_103135719_103135949_103143267_103143396_103147771_103147888_103148489_103148618_103152135_103152286_103153302
transcript_3935.nic	chr1	-	431	4	ISM	ENSG00000127483.19	ENST00000424732.5	970	8	-35	16388	-24	0	5prime_fragment	FALSE	canonical	3	116	junction_3	126.951434283614	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAGAAGAAAGTGAAAAAAA	-20787337	False	NA	NA	False	AAGAAA	-2	NA	20787347	20773586	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_20773611_20776596_20776751_20779811_20779912_20787194
transcript_39352.known	chr11	-	3838	7	FSM	ENSG00000170962.13	ENST00000393158.7	3838	7	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_6	5.87130498460285	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTCCATTATTTAGTACT	-104164063	False	84	NA	False	AATAAA	-19	NA	104164147	103907188	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_103909820_103926911_103927127_103943451_103943651_103947661_103947725_103996064_103996246_104000050_104000256_104163803
transcript_39357.known	chr11	+	2994	11	FSM	ENSG00000152578.13	ENST00000393125.6	2994	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_10	24.1513974750945	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATTCATAAATATTTATT	105610015	False	NA	8	True	AATAAA	-18	NA	105610028	105913110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_105610429_105610907_105611086_105612275_105612435_105752980_105753221_105862023_105862209_105887518_105887573_105898268_105898428_105903813_105903982_105905196_105905302_105910434_105910546_105911875
transcript_3936.nic	chr1	-	955	4	ISM	ENSG00000127483.19	ENST00000417710.5	572	5	-407	3010	-24	101	5prime_fragment	FALSE	canonical	3	92	junction_3	135.7996890849	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGAGTTATGTCTTCTT	-20786680	False	NA	8	True	AAAAAG	-3	NA	20786690	20776596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_20776751_20779811_20779912_20780344_20780541_20786185
transcript_39360.known	chr11	+	2778	10	FSM	ENSG00000152578.13	ENST00000428631.6	2778	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_9	24.6506454476887	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATTCATAAATATTTATT	105610665	False	NA	8	True	AATAAA	-18	NA	105610723	105913110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_105611086_105612275_105612435_105752980_105753221_105862023_105862209_105887518_105887573_105898268_105898428_105903813_105903982_105905196_105905302_105910434_105910546_105911875
transcript_39363.known	chr11	+	2647	3	FSM	ENSG00000152578.13	ENST00000527669.1	2647	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	19.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTGTAAACATGATAAATAT	105608937	False	NA	26	True	AATAAA	-35	NA	105610120	105614436	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_105610429_105610907_105611086_105612275
transcript_39367.known	chr11	+	470	3	FSM	ENSG00000152578.13	ENST00000525921.1	470	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	49	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTAAAACATAAGCTAT	105610243	False	NA	NA	False	NA	NA	NA	105610265	105612434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_105610429_105610937_105611086_105612275
transcript_3937.known	chr1	-	727	4	FSM	ENSG00000127483.19	ENST00000414993.1	727	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	162.124095131545	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACTGTAGAAGAACAAGAGA	-20781966	True	NA	NA	False	NA	NA	NA	20786652	20776719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_20776751_20779811_20779912_20780344_20780541_20786252
transcript_39373.nic	chr11	-	2434	4	NIC	ENSG00000170903.12	novel	948	3	NA	NA	-27	216	intron_retention	FALSE	canonical	2	4	junction_1	50.7433630033415	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTATTTGGAAGTTATG	-106017999	True	NA	-6	True	AATAAA	-14	NA	106022277	105995406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_105996618_106009582_106010111_106010455_106011068_106022194
transcript_39374.known	chr11	-	4103	3	FSM	ENSG00000170903.12	ENST00000301919.9	4103	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	53	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAATTTCAGATGATAC	-106017962	True	NA	2	True	AATAAA	-43	NA	106022240	106007898	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_106010111_106010455_106011068_106020961
transcript_39375.nic	chr11	-	3242	3	NIC	ENSG00000170903.12	novel	4103	3	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	52.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAATTTCAGATGATAC	-106017975	True	NA	2	True	AATAAA	-43	NA	106022253	106007898	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_106010111_106010455_106011068_106021835
transcript_39376.known	chr11	-	948	3	FSM	ENSG00000170903.12	ENST00000530788.1	948	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	38.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATGATGAGCCTCATTTG	NA	False	NA	NA	False	NA	NA	NA	106022403	106009983	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_106010111_106010455_106011068_106022194
transcript_39380.known	chr11	-	780	2	FSM	ENSG00000170903.12	ENST00000530108.1	780	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCTTGACTGGCGAGCAC	-106017972	True	NA	NA	False	NA	NA	NA	106022250	106010702	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_106011068_106021835
transcript_39383.known	chr11	+	2767	6	FSM	ENSG00000149313.11	ENST00000278618.9	2767	6	0	0	0	0	multi-exon	FALSE	canonical	3	468	junction_3	43.0970996703955	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTATGAGCCTGACACTG	106071510	True	NA	21	True	AATAAA	-23	NA	106077661	106098695	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_106077894_106079466_106079693_106090556_106090679_106091315_106091478_106094582_106094655_106096742
transcript_39387.known	chr11	+	1252	5	FSM	ENSG00000149313.11	ENST00000525660.1	1252	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	242.679186375758	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAACATGGAAACG	106071506	True	NA	NA	False	AATGAA	-22	NA	106077657	106097298	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_106077894_106079466_106079693_106091315_106091478_106094582_106094655_106096742
transcript_3939.known	chr1	-	473	4	FSM	ENSG00000127483.19	ENST00000437575.5	473	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	178.349843472504	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTCCACCTGCTACTTC	-20784468	True	NA	-93	True	NA	NA	NA	20787323	20776697	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_20776751_20779811_20779912_20780349_20780541_20787194
transcript_39391.known	chr11	-	3840	4	FSM	ENSG00000182359.15	ENST00000531837.2	3840	4	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_3	23.4141457717813	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAGGAATTGTTCATCTA	-106076398	True	NA	NA	False	AATAAA	-19	NA	106077347	106051097	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_106054456_106058864_106059110_106076506_106076708_106077311
transcript_39394.known	chr11	-	3751	3	FSM	ENSG00000182359.15	ENST00000526793.5	3751	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	33.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAGGAATTGTTCATCTA	NA	False	NA	NA	False	AATAAA	-19	NA	106077459	106051097	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_106054456_106058864_106059110_106077311
transcript_39397.known	chr11	-	3278	18	FSM	ENSG00000152404.16	ENST00000282251.10	3244	18	-19	-15	-19	15	multi-exon	FALSE	canonical	3	108	junction_15	13.5825045211015	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTTATTTCTGGATT	-107454524	True	NA	0	True	ATTAAA	-36	NA	107457844	107326344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_107327054_107329917_107330020_107334880_107334962_107336557_107336714_107348936_107349054_107353523_107353737_107390073_107390212_107392778_107392896_107416208_107416299_107418193_107418288_107428798_107429452_107433633_107433750_107439089_107439184_107441502_107441623_107442938_107443050_107454449_107454573_107455665_107455777_107457711
transcript_3940.nic	chr1	-	738	3	NIC	ENSG00000127483.19	novel	572	5	NA	NA	-3	101	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	199	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGAGTTATGTCTTCTT	-20781983	True	NA	8	True	AAAAAG	-3	NA	20786669	20776596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_20776751_20779811_20779912_20786185
transcript_39406.known	chr11	-	4067	12	FSM	ENSG00000137760.15	ENST00000428149.7	4067	12	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_9	5.39053348377222	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTGGTCTGCTCATT	-107564971	True	NA	-1	True	AATAAA	-19	NA	107565735	107502726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_107505216_107510886_107511037_107522298_107522556_107525440_107525593_107532299_107532407_107549752_107549824_107551807_107551913_107553107_107553204_107553846_107553979_107556765_107557004_107560764_107560900_107565600
transcript_39407.known	chr11	-	2114	12	FSM	ENSG00000137760.15	ENST00000417449.6	2114	12	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_11	8.2842078181051	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTACCTGAACACATCA	-107564978	True	NA	NA	False	NA	NA	NA	107565742	107504657	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_107505216_107510886_107511037_107522298_107522556_107525440_107525593_107532299_107532407_107549752_107549824_107551807_107551913_107553107_107553204_107553846_107553979_107556765_107557004_107560764_107560900_107565629
transcript_39413.known	chr11	+	2935	12	FSM	ENSG00000110675.13	ENST00000265840.12	2935	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	1.65144564768954	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGGATTTCATATTAATA	107591007	True	NA	13	True	AATAAA	-26	NA	107591146	107666779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_107591410_107618104_107618207_107630416_107630563_107630699_107630729_107631579_107631678_107635635_107635766_107647467_107647602_107650334_107650404_107650884_107650909_107654171_107654223_107655932_107656067_107665024
transcript_39415.known	chr11	+	1990	11	FSM	ENSG00000110675.13	ENST00000443271.2	1990	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	2.1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	107591109	True	NA	NA	False	NA	NA	NA	107591248	107665960	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_107591410_107618104_107618207_107630416_107630563_107630699_107630729_107631579_107631678_107635635_107635766_107647467_107647602_107650334_107650404_107654171_107654223_107655932_107656067_107665024
transcript_39416.known	chr11	-	1076	8	FSM	ENSG00000110660.15	ENST00000375682.8	1076	8	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_7	86.1574259180039	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGAAGATGGCGCACCC	-107858456	False	NA	NA	False	NA	NA	NA	107858561	107792614	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_107792801_107803000_107803156_107804717_107804771_107805358_107805516_107806716_107806877_107811666_107811795_107815789_107815966_107858500
transcript_39417.known	chr11	-	2769	8	FSM	ENSG00000110660.15	ENST00000525815.6	2769	8	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_5	19.5040550467154	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTGTGTGGTTTCTTTG	-107857336	True	NA	NA	False	ATTAAA	-25	NA	107858787	107790990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_107792801_107803000_107803156_107804717_107804771_107805358_107805516_107806716_107806877_107811666_107811795_107815789_107815966_107858657
transcript_39419.known	chr11	-	1007	7	FSM	ENSG00000110660.15	ENST00000533664.1	1007	7	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_6	91.0744506190158	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATCCCCCACCAGGATAA	-107857357	True	NA	NA	False	NA	NA	NA	107858808	107792597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_107792801_107803000_107803156_107804717_107804771_107805358_107805516_107806716_107806877_107811666_107811795_107858657
transcript_3942.nic	chr1	-	407	3	ISM	ENSG00000127483.19	ENST00000424732.5	970	8	-35	19398	-24	101	5prime_fragment	FALSE	canonical	3	116	junction_2	152.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGAGTTATGTCTTCTT	-20787337	False	NA	8	True	AAAAAG	-3	NA	20787347	20776596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_20776751_20779811_20779912_20787194
transcript_39427.known	chr11	+	1885	2	FSM	ENSG00000179331.3	ENST00000320578.3	1885	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATTGTCAAAATTATTAAT	107926030	True	NA	NA	False	AGTAAA	-17	NA	107928447	107963482	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_107928796_107961945
transcript_39429.known	chr11	+	3596	20	FSM	ENSG00000166266.14	ENST00000531427.5	3596	20	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_19	26.0078828876779	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAATTTTTAAAAATTAGT	108006996	False	NA	NA	False	AAGAAA	-34	NA	108009259	108106852	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_108009373_108033801_108033912_108046269_108046370_108049889_108050067_108052659_108052802_108054646_108054793_108054874_108054956_108070095_108070190_108072331_108072463_108073389_108073498_108078175_108078241_108088526_108088660_108089491_108089624_108094390_108094515_108094811_108094988_108095529_108095692_108097635_108097755_108098405_108098530_108104189_108104903_108106206
transcript_39432.known	chr11	+	6171	19	FSM	ENSG00000166266.14	ENST00000393094.7	6171	19	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_17	14.0352290441228	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTTTACCTATCCAGAAAA	108006634	True	NA	13	True	AATAAA	-15	NA	108008897	108107761	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_108009373_108033801_108033912_108046269_108046370_108049889_108050067_108052659_108052802_108054646_108054793_108054874_108054956_108070095_108070190_108072331_108072463_108073389_108073498_108078175_108078241_108088526_108088660_108089491_108089624_108094390_108094515_108094811_108094988_108095529_108095692_108097635_108097755_108098405_108098530_108104189
transcript_39438.nic	chr11	+	2551	18	ISM	ENSG00000166266.14	ENST00000531427.5	3596	20	-370	8379	-8	-8379	5prime_fragment	FALSE	canonical	3	91	junction_17	14.4056409558715	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGATGAGAGAAGAAGAGAAT	108006626	True	NA	9	True	NA	NA	NA	108008889	108098473	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_108009373_108033801_108033912_108046269_108046370_108049889_108050067_108052659_108052802_108054646_108054793_108054874_108054956_108070095_108070190_108072331_108072463_108073389_108073498_108078175_108078241_108088526_108088660_108089491_108089624_108094390_108094515_108094811_108094988_108095529_108095692_108097635_108097755_108098405
transcript_39439.nic	chr11	+	2602	18	ISM	ENSG00000166266.14	ENST00000531427.5	3596	20	-364	8322	-2	-8322	5prime_fragment	FALSE	canonical	3	91	junction_17	14.4056409558715	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAATGTTGACAGAATG	108006632	True	NA	66	True	AATGAA	-35	NA	108008895	108098530	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_108009373_108033801_108033912_108046269_108046370_108049889_108050067_108052659_108052802_108054646_108054793_108054874_108054956_108070095_108070190_108072331_108072463_108073389_108073498_108078175_108078241_108088526_108088660_108089491_108089624_108094390_108094515_108094811_108094988_108095529_108095692_108097635_108097755_108098405
transcript_3944.known	chr1	-	5762	35	FSM	ENSG00000075151.24	ENST00000400422.6	5762	35	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_20	63.8299535937364	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGAGAACTTTTAATTTAT	-21168769	True	NA	71	True	TTTAAA	-44	NA	21176847	20807003	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_20807501_20810737_20810885_20813157_20813240_20817391_20817539_20825099_20825199_20827616_20827699_20829146_20829273_20840855_20841029_20849414_20849531_20851257_20851479_20853559_20853678_20854977_20855072_20857402_20857498_20860384_20860518_20862227_20862333_20864475_20864713_20865115_20865263_20879322_20879521_20886200_20886372_20892618_20892730_20893516_20893637_20895367_20895502_20899696_20899944_20904882_20904972_20941490_20942331_20950002_20950109_20969473_20969597_20973001_20973100_20980333_20980449_20981047_20981228_21002712_21002809_21050865_21050995_21089137_21089214_21176174_21176359_21176721
transcript_39445.nic	chr11	+	2205	15	ISM	ENSG00000166266.14	ENST00000531427.5	3596	20	-448	11940	-86	-11940	5prime_fragment	FALSE	canonical	3	93	junction_2	14.8887027436159	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGTAGAAGAATTCTACAA	NA	False	NA	NA	False	NA	NA	NA	108008811	108094912	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_108009373_108033801_108033912_108046269_108046370_108049889_108050067_108052659_108052802_108054646_108054793_108054874_108054956_108070095_108070190_108072331_108072463_108073389_108073498_108078175_108078241_108088526_108088660_108089491_108089624_108094390_108094515_108094811
transcript_39448.known	chr11	+	1498	13	FSM	ENSG00000075239.14	ENST00000673531.1	1498	13	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	161.044227017163	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTCAGATAAGCTGTTTC	108116124	True	NA	8	True	NA	NA	NA	108121566	108147470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_108121679_108127885_108127980_108131906_108131955_108133819_108133938_108134220_108134317_108135141_108135243_108138897_108139042_108140064_108140216_108141604_108141701_108142436_108142551_108143982_108144048_108146201_108146360_108147269
transcript_39451.known	chr11	+	1537	12	FSM	ENSG00000075239.14	ENST00000265838.9	1537	12	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_7	24.5336672033816	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGATACATTTTTGCATT	108116124	True	NA	27	True	AATAAA	-37	NA	108121566	108147603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_108121679_108131906_108131955_108133819_108133938_108134220_108134317_108135141_108135243_108138897_108139042_108140064_108140216_108141604_108141701_108142436_108142551_108143982_108144048_108146201_108146360_108147269
transcript_39452.known	chr11	+	1321	11	FSM	ENSG00000075239.14	ENST00000672031.1	1321	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	131.34112075051	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTGTGGGTCAGCTTAT	108116124	True	NA	-10	True	NA	NA	NA	108121566	108147452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_108121679_108131906_108131955_108133819_108133938_108134220_108134317_108135141_108135243_108138897_108139042_108140064_108140216_108141604_108141701_108142436_108142551_108146201_108146360_108147269
transcript_39453.nic	chr11	+	1236	6	ISM	ENSG00000166266.14	ENST00000531427.5	3596	20	-448	52060	-86	0	5prime_fragment	FALSE	canonical	3	93	junction_2	16.0947196309846	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTTAGAACTTAGTATA	NA	False	NA	NA	False	NA	NA	NA	108008811	108054792	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_108009373_108033801_108033912_108046269_108046370_108049889_108050067_108052659_108052802_108054646
transcript_39457.known	chr11	-	605	1	FSM	ENSG00000288012.1	ENST00000660738.1	605	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGTGATGACTCTTAATATT	-108009178	True	NA	2	True	AGTAAA	-19	NA	108009282	108008677	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_108008700_108009300
transcript_39458.known	chr11	-	6113	18	FSM	ENSG00000149308.17	ENST00000278612.9	6113	18	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_2	8.39426398322504	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAGATTCATAGTTAACT	-108219713	True	NA	NA	False	AATAAA	-15	NA	108222638	108157214	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_108159020_108160879_108162015_108162119_108162181_108169743_108169853_108169927_108170044_108172198_108173852_108176245_108176375_108176993_108177091_108185231_108185320_108185402_108185495_108186481_108186570_108188097_108188180_108189105_108189331_108190459_108190501_108192117_108192191_108193956_108194018_108197301_108197421_108222499
transcript_39461.nic	chr11	-	1141	11	ISM	ENSG00000149308.17	ENST00000278612.9	6113	18	-35	19778	-35	-5861	5prime_fragment	FALSE	canonical	3	46	junction_8	7.2587877775838	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGAGACTATTTATTTCA	-108219748	True	NA	NA	False	NA	NA	NA	108222673	108176992	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_108177091_108185231_108185320_108185402_108185495_108186481_108186570_108188097_108188180_108189105_108189331_108190459_108190501_108192117_108192191_108193956_108194018_108197301_108197421_108222499
transcript_39462.nic	chr11	-	353	3	ISM	ENSG00000149308.17	ENST00000610253.5	3959	13	-37	22826	-35	-3498	5prime_fragment	FALSE	canonical	3	53	junction_1	7.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAGAGTTCTGATTTGGA	-108219748	True	NA	NA	False	TTTAAA	-26	NA	108222673	108193957	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_108194018_108197301_108197421_108222499
transcript_39466.known	chr11	+	442	4	FSM	ENSG00000149311.20	ENST00000683914.1	442	4	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_3	2.94392028877595	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCGCGTGAGTTTTTTTT	108220816	False	NA	7	True	AATAAA	-16	NA	108223148	108229366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_108223187_108227594_108227697_108227775_108227889_108229177
transcript_39467.known	chr11	-	4253	8	FSM	ENSG00000178202.13	ENST00000323468.10	4253	8	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_5	2.61080955464244	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGAAAAAGATACCTTTTG	-108496927	True	NA	-10	True	AATAAA	-21	NA	108498384	108472115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_108474953_108477606_108477712_108479300_108479496_108481179_108481377_108482005_108482223_108486156_108486441_108490969_108491168_108498164
transcript_39477.known	chr11	-	10304	6	FSM	ENSG00000110723.12	ENST00000265843.9	10304	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.19089023002066	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACTATTTGATTTGGTTT	-108593732	False	NA	-6	True	AATAAA	-14	NA	108593768	108505434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_108514876_108518234_108518374_108528135_108528185_108539023_108539187_108541651_108541813_108593417
transcript_39482.known	chr11	+	3217	18	FSM	ENSG00000178105.12	ENST00000322536.8	3217	18	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_10	21.8603621316288	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTAATGTTTGCATTGTG	108661728	True	NA	13	True	AATAAA	-21	NA	108665068	108940927	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_108665340_108673466_108673528_108675595_108675727_108677084_108677244_108678314_108678436_108679370_108679561_108688935_108689063_108691875_108692039_108693515_108693601_108706738_108706838_108715878_108715967_108719796_108719886_108722996_108723463_108838445_108838566_108841314_108841477_108852152_108852210_108917872_108918019_108940245
transcript_39484.nic	chr11	+	2149	14	ISM	ENSG00000178105.12	ENST00000526794.1	6707	17	-89	83735	-25	-2968	5prime_fragment	FALSE	canonical	3	196	junction_10	18.9024277580402	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAATGAAGAGAAATTTTAA	108661692	True	NA	22	True	AAGAAA	-31	NA	108665032	108838508	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_108665340_108673466_108673528_108675595_108675727_108677084_108677244_108678314_108678436_108679370_108679561_108688935_108689063_108691875_108692039_108693515_108693601_108706738_108706838_108715878_108715967_108719796_108719886_108722996_108723463_108838445
transcript_39486.nic	chr11	+	1870	13	ISM	ENSG00000178105.12	ENST00000688536.1	3144	15	-36	26904	-25	-26904	5prime_fragment	FALSE	canonical	3	196	junction_10	17.177787659908	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGACGATGAAGA	108661692	True	NA	17	True	AATGAA	-10	NA	108665032	108723246	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_108665340_108673466_108673528_108675595_108675727_108677084_108677244_108678314_108678436_108679370_108679561_108688935_108689063_108691875_108692039_108693515_108693601_108706738_108706838_108715878_108715967_108719796_108719886_108722996
transcript_39490.known	chr11	-	4392	14	FSM	ENSG00000137710.17	ENST00000645495.2	4392	14	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_4	21.0142245428209	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCCACTGTTGTTATTTAA	-110292892	True	NA	-4	True	AATAAA	-24	NA	110296614	110229440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_110232034_110233236_110233480_110236098_110236192_110237491_110237653_110247702_110247834_110253945_110254110_110255288_110255386_110257766_110257914_110258105_110258190_110263959_110264235_110264778_110264875_110272535_110272620_110279680_110279757_110296466
transcript_39492.nic	chr11	-	1369	11	ISM	ENSG00000137710.17	ENST00000645495.2	4392	14	-17	8162	9	-5765	5prime_fragment	FALSE	canonical	3	173	junction_1	21.5965274986513	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CGAGCAAAAGAAGAAGCAGA	-110292909	True	NA	-1	True	NA	NA	NA	110296631	110237602	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_110237653_110247702_110247834_110253945_110254110_110255288_110255386_110257766_110257914_110258105_110258190_110263959_110264235_110264778_110264875_110272535_110272620_110279680_110279757_110296466
transcript_39493.nic	chr11	-	1289	10	ISM	ENSG00000137710.17	ENST00000645495.2	4392	14	-89	18364	9	6140	5prime_fragment	FALSE	canonical	3	177	junction_2	18.7603469393279	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAATAGCAGAAAAGGAA	-110292981	True	NA	-96	True	AAGAAA	-2	NA	110296703	110247804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_110247834_110253945_110254110_110255288_110255386_110257766_110257914_110258105_110258190_110263959_110264235_110264778_110264875_110272535_110272620_110279680_110279757_110296466
transcript_39494.nic	chr11	-	1261	9	ISM	ENSG00000137710.17	ENST00000645495.2	4392	14	-89	24504	9	0	5prime_fragment	FALSE	canonical	3	177	junction_1	19.5955192582386	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGGTTTATGACCTTTC	-110292981	True	NA	NA	False	NA	NA	NA	110296703	110253944	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_110254110_110255288_110255386_110257766_110257914_110258105_110258190_110263959_110264235_110264778_110264875_110272535_110272620_110279680_110279757_110296466
transcript_39498.nic	chr11	-	938	7	ISM	ENSG00000137710.17	ENST00000645495.2	4392	14	-90	28388	8	285	5prime_fragment	FALSE	canonical	3	204	junction_5	13.6676828890473	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACTGAATTGTGGCTAGG	-110296683	False	NA	NA	False	AATAAA	-11	NA	110296704	110257828	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_110257914_110258105_110258190_110263959_110264235_110264778_110264875_110272535_110272620_110279680_110279757_110296466
transcript_39499.nic	chr11	-	596	2	ISM	ENSG00000137710.17	ENST00000533678.1	531	5	-379	14913	-285	-14913	5prime_fragment	FALSE	canonical	3	206	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCGAAACCAGTAAGTGTA	-110296976	False	NA	NA	False	AAAAAG	-11	NA	110296997	110279691	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_110279757_110296466
transcript_395.nic	chr1	-	3210	9	NIC	ENSG00000131591.18	novel	2010	11	NA	NA	-7	0	intron_retention	FALSE	canonical	3	23	junction_8	11.1908165475089	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGTTCCGAGCTGCTCT	-1115111	True	NA	-11	True	TATAAA	-16	NA	1116102	1081822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_1084384_1084480_1084507_1085877_1086013_1087138_1087205_1087501_1087598_1090352_1090429_1091471_1091566_1091990_1092104_1116059
transcript_39500.known	chr11	+	3144	4	FSM	ENSG00000137714.3	ENST00000260270.3	3144	4	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_1	5.18544972870135	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTTTGTATAAAGGTGAT	110427992	True	NA	NA	False	ATTAAA	-20	NA	110429947	110464884	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_110430306_110435833_110435959_110456917_110457048_110462353
transcript_3951.known	chr1	-	5325	34	FSM	ENSG00000075151.24	ENST00000634879.2	5325	34	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_25	46.1734661977662	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTTCAAATACACAAAATG	-21168758	True	NA	NA	False	NA	NA	NA	21176836	20807318	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_20807501_20810737_20810885_20813157_20813240_20817391_20817539_20825099_20825199_20827616_20827699_20829146_20829273_20840855_20841029_20849414_20849531_20851257_20851479_20853559_20853678_20854977_20855072_20857402_20857498_20860384_20860518_20862227_20862333_20864475_20864713_20865115_20865263_20879322_20879521_20886200_20886372_20893516_20893637_20895367_20895502_20899696_20899944_20904882_20904972_20941490_20942331_20950002_20950109_20969473_20969597_20973001_20973100_20980333_20980449_20981047_20981228_21002712_21002809_21050865_21050995_21089137_21089214_21176174_21176359_21176721
transcript_39510.known	chr11	+	1332	5	FSM	ENSG00000214290.9	ENST00000526216.1	1332	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.39081998549647	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGATTTTTTTTAATT	111299627	False	NA	6	True	AATAAA	-18	NA	111299732	111308735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_111300018_111300526_111300622_111304927_111304983_111306393_111306624_111308068
transcript_39512.known	chr11	-	5442	2	FSM	ENSG00000196167.10	ENST00000355430.4	5442	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTATGACTAAATTAACTT	-111299671	False	NA	NA	False	AATAAA	-19	NA	111299814	111293445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_111298667_111299593
transcript_39513.known	chr11	+	1763	8	FSM	ENSG00000204381.12	ENST00000525126.5	1763	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	11.7699028137406	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAATAAAATCAAATAAAGAG	111540319	True	NA	-20	True	NA	NA	NA	111540708	111560933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_111540929_111541561_111541586_111543922_111544221_111549617_111549776_111554560_111554594_111555206_111555291_111557540_111557648_111560094
transcript_39514.known	chr11	+	9622	15	FSM	ENSG00000170145.5	ENST00000304987.4	9622	15	0	0	0	0	multi-exon	TRUE	canonical	2	14	junction_3	4.84715359352101	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGGGTGATGTGAATGTC	111600073	True	NA	16	True	AATAAA	-20	NA	111602448	111730855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_111602699_111616242_111616360_111620338_111620403_111688000_111688163_111700885_111701011_111701451_111701576_111703202_111703424_111704986_111705140_111712210_111712376_111719774_111720004_111720477_111720763_111720898_111721063_111721829_111721941_111722664_111722757_111723495
transcript_39518.known	chr11	-	2082	16	FSM	ENSG00000137713.16	ENST00000311129.9	2082	16	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	183.174403840226	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCGAACGAAATTTTTACC	-111760830	True	NA	-9	True	AATAAA	-23	NA	111766382	111726907	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_111727058_111737447_111737570_111742052_111742145_111742522_111742666_111743375_111743531_111747953_111748015_111752158_111752333_111753442_111753578_111754498_111754570_111754979_111755095_111755294_111755451_111759803_111759952_111760818_111761052_111764804_111764906_111765293_111765385_111766247
transcript_39519.known	chr11	-	5553	15	FSM	ENSG00000137713.16	ENST00000527614.6	5553	15	0	0	0	0	multi-exon	FALSE	canonical	3	500	junction_1	62.6928453425338	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCAGGTCTTTCCTGTG	-111760837	True	NA	NA	False	NA	NA	NA	111766389	111737876	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_111741613_111742052_111742145_111742522_111742666_111743375_111743531_111747953_111748015_111752158_111752333_111753442_111753578_111754498_111754570_111754979_111755095_111755294_111755451_111759803_111759952_111760818_111761052_111764804_111764906_111765293_111765385_111766247
transcript_39524.known	chr11	-	1953	14	FSM	ENSG00000137713.16	ENST00000341980.10	1953	14	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_6	157.013247094994	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTCCTGCATCCTCACTG	-111760816	True	NA	32	True	NA	NA	NA	111766368	111741320	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_111741613_111742052_111742145_111742522_111742666_111743375_111743531_111747953_111748015_111752158_111752333_111754498_111754570_111754979_111755095_111755294_111755451_111759803_111759952_111760818_111761052_111764804_111764906_111765293_111765385_111766247
transcript_39528.known	chr11	-	2345	15	FSM	ENSG00000086848.15	ENST00000398006.6	2345	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_14	20.1834696962537	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGAATCTGGGTGCTCT	-111871289	False	926	-6	True	AATAAA	-17	NA	111871301	111786283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_111786521_111809642_111809774_111836164_111836295_111837467_111837616_111838248_111838379_111840654_111840810_111844600_111844724_111853379_111853486_111853648_111853737_111857601_111857738_111860546_111860636_111865180_111865252_111868601_111868737_111870231_111870371_111870774
transcript_39530.known	chr11	-	2028	15	FSM	ENSG00000086848.15	ENST00000614444.4	2028	15	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_14	10.903332199893	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTCTATTTCAAAGTCT	-111870607	True	NA	22	True	AATAAA	-45	NA	111871533	111786255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_111786521_111809642_111809774_111836164_111836295_111837467_111837616_111838248_111838379_111840654_111840810_111844600_111844724_111853379_111853486_111853648_111853737_111857601_111857738_111860546_111860636_111865180_111865252_111868601_111868737_111870231_111870371_111871351
transcript_39531.known	chr11	-	1930	15	FSM	ENSG00000086848.15	ENST00000531154.5	1930	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_14	23.1851465470495	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGAATCTGGGTGCTCT	-111870853	False	NA	-6	True	AATAAA	-17	NA	111870865	111786283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_111786521_111809642_111809774_111836164_111836295_111837467_111837616_111838248_111838400_111840654_111840810_111844600_111844724_111853379_111853486_111853648_111853737_111857601_111857738_111860546_111860636_111865180_111865252_111868601_111868737_111870231_111870371_111870774
transcript_39532.known	chr11	-	6158	15	FSM	ENSG00000086848.15	ENST00000616540.5	6158	15	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_5	16.4651766105416	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTTTCTTAATGTGA	-111871569	False	NA	-19	True	AATAAA	-15	NA	111871581	111782194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_111786521_111809642_111809774_111836164_111836295_111837467_111837616_111838248_111838400_111840654_111840810_111844600_111844724_111853379_111853486_111853648_111853737_111857601_111857738_111860546_111860636_111865180_111865252_111868601_111868737_111870231_111870371_111871351
transcript_39538.known	chr11	+	509	5	FSM	ENSG00000137720.8	ENST00000530799.5	509	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	58.0215477215146	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTGAACTGGATCCTCC	111877516	False	NA	NA	False	NA	NA	NA	111879560	111883805	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_111879606_111881484_111881616_111882367_111882599_111883135_111883203_111883770
transcript_39539.known	chr11	-	2774	5	FSM	ENSG00000255561.7	ENST00000260257.9	2774	5	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_4	3.96074487943871	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGGGTCTGTTTGACTC	-111878943	True	NA	NA	False	AATAAA	-20	NA	111879165	111874055	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_111876105_111876480_111876640_111876807_111877012_111878555_111878713_111878960
transcript_39545.known	chr11	+	1437	4	FSM	ENSG00000137720.8	ENST00000529270.1	1437	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	55.6317255609503	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATATTCTTTATCCCTT	111878731	False	NA	NA	False	AATAAA	-17	NA	111880775	111884069	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_111881616_111882367_111882599_111883135_111883203_111883770
transcript_39546.known	chr11	+	2568	4	FSM	ENSG00000137720.8	ENST00000260276.8	2568	4	0	0	0	0	multi-exon	TRUE	canonical	3	121	junction_3	15.5777619273972	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGTTTCTGGGCTACTA	111877496	True	NA	NA	False	AATAAA	-14	NA	111879540	111885975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_111879606_111882367_111882599_111883135_111883203_111883770
transcript_39548.known	chr11	-	2206	4	FSM	ENSG00000255561.7	ENST00000531487.1	2206	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	9.62635271879577	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGGAGTCTTGCTCTGCCG	-111879445	True	NA	NA	False	NA	NA	NA	111879457	111874758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_111876105_111876480_111876640_111876807_111877012_111878960
transcript_39551.known	chr11	+	599	3	FSM	ENSG00000137720.8	ENST00000530214.5	599	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	48	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTTTATCCCTTTTTTT	111877497	True	NA	NA	False	AATAAA	-22	NA	111879541	111884074	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_111879606_111882367_111882599_111883770
transcript_39552.known	chr11	+	1104	4	FSM	ENSG00000149300.10	ENST00000278601.6	1104	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	2.94392028877595	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGCGCGTTTTCTGGG	111918590	True	NA	12	True	AATAAA	-15	NA	111918912	111926871	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_111919005_111924325_111924364_111925652_111925715_111925959
transcript_39553.known	chr11	-	1107	4	FSM	ENSG00000109846.9	ENST00000527899.6	1107	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	5.31245915016974	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATAACTGTCTTGTGTTTG	NA	False	NA	-2	True	AATAAA	-16	NA	111913347	111908625	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_111908968_111910326_111910450_111911523_111911923_111913104
transcript_39554.known	chr11	-	941	4	FSM	ENSG00000109846.9	ENST00000616970.5	941	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	5.73488351136175	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTGTCTTGTGTTTGAA	-111913121	True	NA	0	True	AATAAA	-18	NA	111913213	111908623	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_111908968_111910326_111910450_111911523_111911923_111913138
transcript_39555.known	chr11	+	843	2	FSM	ENSG00000170276.6	ENST00000304298.4	843	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGTACTGCTCCCTA	111912666	True	NA	NA	False	AATAAA	-16	NA	111912733	111914093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_111912924_111913440
transcript_39557.known	chr11	+	4825	16	FSM	ENSG00000150764.14	ENST00000615255.1	4825	16	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	9.45774227228089	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	111977160	True	NA	NA	False	NA	NA	NA	111977308	112021979	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_111977795_111980736_111980850_111982338_111982488_111985231_111985322_111986870_111986925_111989004_111989056_111992414_111992520_111992950_111993005_111993495_111993589_111993668_111993741_111995018_111995109_111995402_111995565_111996079_111996147_112016690_112016797_112017776_112017886_112018955
transcript_39560.known	chr11	+	3424	14	FSM	ENSG00000150764.14	ENST00000618522.4	3424	14	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	5.69957955472083	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTCTGTCTCTTAAACCA	111982077	True	NA	NA	False	AATACA	-11	NA	111982216	112021055	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_111982488_111985231_111985322_111986870_111986925_111989004_111989056_111992414_111992520_111992950_111993005_111993495_111993589_111993668_111993741_111995018_111995109_111995402_111995565_111996079_111996147_112016690_112016797_112017776_112017886_112018955
transcript_39562.nic	chr11	+	1185	7	ISM	ENSG00000150764.14	ENST00000440460.7	5826	20	-145	40201	-145	6457	5prime_fragment	FALSE	canonical	3	23	junction_5	5.08811250749125	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAGGAAGCAAAGAAAATG	111937138	False	NA	NA	False	AAAAAG	-4	NA	111937197	111982452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_111937560_111964548_111964679_111968512_111968639_111974022_111974255_111974875_111974984_111980736_111980850_111982338
transcript_39564.nic	chr11	+	2195	5	ISM	ENSG00000150764.14	ENST00000440460.7	5826	20	-370	46658	-370	0	5prime_fragment	FALSE	canonical	3	30	junction_3	3.20156211871642	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTCAGTGGCATTTAGTA	111936915	False	NA	NA	False	ATTAAA	-15	NA	111936972	111975995	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_111937560_111964548_111964679_111968512_111968639_111974022_111974255_111974875
transcript_39565.nic	chr11	+	834	3	ISM	ENSG00000150764.14	ENST00000615255.1	4825	16	-121	39527	-121	6457	5prime_fragment	FALSE	canonical	3	7	junction_1	11	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAGGAAGCAAAGAAAATG	111977166	False	NA	NA	False	AAAAAG	-4	NA	111977187	111982452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_111977795_111980736_111980850_111982338
transcript_39569.known	chr11	+	3825	14	FSM	ENSG00000150768.17	ENST00000681316.1	3825	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	188.15475815868	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATAAATCTTCAATATGT	112016251	True	NA	-11	True	AAAAAG	-44	NA	112025425	112064375	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_112025752_112026197_112026300_112028514_112028640_112028791_112028946_112033403_112033531_112037272_112037461_112039243_112039398_112043471_112043534_112045137_112045231_112045862_112045971_112051233_112051350_112059902_112060066_112061037_112061175_112062405
transcript_39577.known	chr11	+	3871	14	FSM	ENSG00000150768.17	ENST00000681638.1	3871	14	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	184.320983211546	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTCTGGTTTAATTTTT	112016256	True	NA	3	True	ATTAAA	-14	NA	112025430	112064389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_112025752_112026197_112026300_112028514_112028640_112028791_112028977_112033403_112033531_112037272_112037461_112039243_112039398_112043465_112043534_112045137_112045231_112045862_112045971_112051233_112051350_112059902_112060066_112061037_112061175_112062405
transcript_39579.known	chr11	+	3723	13	FSM	ENSG00000150768.17	ENST00000681339.1	3723	13	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_9	174.516713621743	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATAAATCTTCAATATGT	112016251	True	NA	-11	True	AAAAAG	-44	NA	112025425	112064375	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_112025752_112026197_112026300_112028514_112028640_112028791_112028946_112033403_112033531_112037272_112037461_112039243_112039398_112043465_112043534_112045137_112045231_112051233_112051350_112059902_112060066_112061037_112061175_112062405
transcript_39585.known	chr11	+	3704	13	FSM	ENSG00000150768.17	ENST00000680010.1	3704	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	195.125315858524	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATAAATCTTCAATATGT	112016251	True	NA	-11	True	AAAAAG	-44	NA	112025425	112064375	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_112025752_112026197_112026300_112028514_112028640_112028791_112028946_112037272_112037461_112039243_112039398_112043465_112043534_112045137_112045231_112045862_112045971_112051233_112051350_112059902_112060066_112061037_112061175_112062405
transcript_39586.known	chr11	+	3517	12	FSM	ENSG00000150768.17	ENST00000393051.5	3517	12	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_4	197.79470114655	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTGGTTTAATTTTTG	112016265	True	NA	4	True	ATTAAA	-15	NA	112025439	112064390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_112025752_112026197_112026300_112028514_112028640_112028791_112028946_112039243_112039398_112043465_112043534_112045137_112045231_112045862_112045971_112051233_112051350_112059902_112060066_112061037_112061175_112062405
transcript_39588.known	chr11	+	3686	6	FSM	ENSG00000150776.18	ENST00000393047.8	3686	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	12.3515181253156	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCATCTTTTACTTTTT	112072971	True	NA	8	True	AATAAA	-19	NA	112074298	112085150	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_112074917_112075566_112075644_112078214_112078316_112080408_112080559_112081981_112082036_112082464
transcript_39592.known	chr11	+	3739	6	FSM	ENSG00000150776.18	ENST00000532163.5	3739	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	27.5201744180519	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCATCTTTTACTTTTT	112072959	True	NA	8	True	AATAAA	-19	NA	112074286	112085150	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_112074917_112075566_112075685_112078214_112078316_112080408_112080559_112081981_112082036_112082464
transcript_39593.known	chr11	+	2322	6	FSM	ENSG00000150776.18	ENST00000420986.6	2322	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	29.7348280640733	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTCGGTCTTGGTTCTG	NA	False	NA	4	True	AGTAAA	-16	NA	112074085	112084134	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_112074359_112075566_112075644_112078214_112078316_112080408_112080559_112081981_112082036_112082467
transcript_39596.known	chr11	+	3693	6	FSM	ENSG00000150776.18	ENST00000280352.13	3693	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	24.2701462706758	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCATCTTTTACTTTTT	112072961	True	NA	8	True	AATAAA	-19	NA	112074288	112085150	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_112074917_112075566_112075644_112078214_112078316_112080408_112080559_112081981_112082036_112082467
transcript_39598.known	chr11	-	741	3	FSM	ENSG00000150779.12	ENST00000507614.1	741	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	209.5	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGAGTGAAATTTATTTA	-112070083	True	NA	-32	True	AGTAAA	-13	NA	112086722	112085148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_112085463_112085966_112086311_112086639
transcript_39601.known	chr11	-	805	2	FSM	ENSG00000150779.12	ENST00000541231.1	805	2	0	0	0	0	multi-exon	FALSE	canonical	3	2079	junction_1	0	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGGC	-112070159	True	NA	NA	False	AAGAAA	-14	NA	112086798	112084816	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_112085463_112086639
transcript_39602.known	chr11	+	2487	12	FSM	ENSG00000150768.17	ENST00000679614.1	2487	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	203.203557917703	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTCTGTGTCCTTCTACT	112016233	True	NA	22	True	AGTAAA	-23	NA	112025407	112063616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_112025497_112028912_112028946_112033403_112033531_112037272_112037461_112039243_112039398_112043465_112043534_112045137_112045231_112045862_112045971_112051233_112051350_112059902_112060066_112061037_112061175_112062405
transcript_39605.known	chr11	+	1339	4	FSM	ENSG00000204370.13	ENST00000375549.8	1339	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1066.40923976992	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTAGCTATCAGTAGTT	112073797	True	NA	27	True	AATAAA	-35	NA	112086872	112095794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_112086960_112087856_112087974_112088866_112089012_112094804
transcript_39606.known	chr11	+	905	3	FSM	ENSG00000204370.13	ENST00000528048.5	905	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	1191	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATTTCTAAATCCTAGGA	112073797	True	NA	NA	False	TTTAAA	-28	NA	112086872	112095505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_112086960_112087856_112087974_112094804
transcript_39612.known	chr11	+	872	6	FSM	ENSG00000150787.8	ENST00000280362.8	872	6	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_2	20.5387438759044	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTGGAGACAATATATATA	112224226	False	NA	NA	False	AATAAA	-18	NA	112226427	112233973	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_112226527_112228593_112228674_112230207_112230231_112230625_112230683_112233162_112233234_112233431
transcript_39618.known	chr11	+	846	5	FSM	ENSG00000150787.8	ENST00000528679.5	846	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	185.350175343861	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATGCTTATGTGACTT	112224165	True	NA	NA	False	AATATA	-6	NA	112226366	112233909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_112226527_112228593_112228674_112230625_112230683_112233162_112233234_112233431
transcript_39621.known	chr11	+	625	4	FSM	ENSG00000150787.8	ENST00000525803.1	625	4	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	213.894574239014	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGGTGTGGGATTATT	112224230	False	NA	25	True	ATTAAA	-22	NA	112226431	112233810	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_112226527_112228593_112228674_112233162_112233234_112233431
transcript_39623.known	chr11	+	3011	2	FSM	ENSG00000250303.5	ENST00000666993.1	3011	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAATGAGGTAATAAAATC	112290178	True	NA	NA	False	AAAAAG	-27	NA	112290263	112294084	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_112290510_112291319
transcript_39624.known	chr11	+	697	2	FSM	ENSG00000250303.5	ENST00000532168.2	697	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTGTGTAGGATGAATTC	112280467	False	NA	2	True	AATAAA	-19	NA	112280485	112291776	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_112280726_112291319
transcript_39631.known	chr11	+	729	2	FSM	ENSG00000149294.17	ENST00000615525.1	729	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTCTTTTTTCTCTCTT	112961000	True	NA	NA	False	NA	NA	NA	112961438	113133951	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_112961665_113133448
transcript_39632.known	chr11	-	517	3	FSM	ENSG00000255129.7	ENST00000533504.2	556	3	38	1	38	-1	multi-exon	FALSE	canonical	2	9	junction_2	6	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGCTCTGTGTTATTAT	-113314317	True	NA	NA	False	AATAAA	-14	NA	113314437	113279382	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_113279650_113280490_113280633_113314329
transcript_39636.known	chr11	+	2256	22	FSM	ENSG00000149292.17	ENST00000529221.6	2256	22	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	5.01562185427032	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCAGAATCAAGTACTCAT	113314248	True	NA	7	True	AATAAA	-18	NA	113314582	113366387	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_113314619_113316242_113316316_113323287_113323452_113323993_113324016_113324604_113324683_113325523_113325646_113329919_113329980_113334965_113335038_113338773_113338835_113339285_113339475_113340663_113340734_113341836_113341926_113344271_113344441_113350072_113350166_113351238_113351300_113352069_113352208_113359362_113359462_113359939_113360009_113362400_113362503_113363827_113363928_113364834_113365061_113366224
transcript_39643.known	chr11	-	2735	16	FSM	ENSG00000086827.9	ENST00000535142.5	2735	16	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	63.0520067528033	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAGGAATGGGCCACCAT	-113770472	True	NA	-93	True	NA	NA	NA	113773691	113733274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_113733815_113736619_113736774_113737571_113737704_113738263_113738395_113739212_113739383_113741693_113741766_113743801_113744041_113747530_113747714_113748256_113748421_113757661_113757854_113758553_113758707_113760208_113760369_113760512_113760591_113760816_113760919_113768832_113768968_113773561
transcript_39645.known	chr11	-	2873	16	FSM	ENSG00000086827.9	ENST00000200135.8	2873	16	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_4	18.3985506675571	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGGTGAGTGTCTTTAA	-113770473	True	NA	-5	True	AATAAA	-16	NA	113773692	113733186	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_113733815_113736619_113736823_113737571_113737704_113738263_113738395_113739212_113739383_113741693_113741766_113743801_113744041_113747530_113747714_113748256_113748421_113757661_113757854_113758553_113758707_113760208_113760369_113760512_113760591_113760816_113760919_113768832_113768968_113773561
transcript_39647.nnic	chr11	-	3074	15	NIC	ENSG00000086827.9	novel	2873	16	NA	NA	-350	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_9	64.8629638671611	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGGTGAGTGTCTTTAA	-113774073	True	NA	-5	True	AATAAA	-16	NA	113774085	113733186	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_113733815_113736619_113736823_113737571_113737704_113738263_113738395_113739212_113739383_113741693_113741766_113743801_113744041_113747530_113747714_113748256_113748421_113758553_113758707_113760208_113760369_113760512_113760591_113760816_113760919_113768832_113768968_113773561
transcript_39663.known	chr11	-	4669	25	FSM	ENSG00000048028.11	ENST00000003302.8	4669	25	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_7	168.364415447234	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGTGCAGTATGGTC	-113865256	True	NA	-6	True	AATAAA	-15	NA	113875570	113797873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_113799416_113801482_113801679_113803157_113803282_113803797_113803878_113804672_113804752_113804867_113805047_113806488_113806585_113808297_113808438_113809062_113809255_113812275_113812505_113813884_113813956_113815173_113815383_113817657_113817838_113823604_113823701_113827232_113827361_113829196_113829346_113830866_113830944_113831919_113831994_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113852500_113852634_113854257_113854336_113875444
transcript_39680.nic	chr11	-	4593	24	NIC	ENSG00000048028.11	novel	4669	25	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	463	junction_16	77.0317981135383	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGTGCAGTATGGTC	-113865276	True	NA	-6	True	AATAAA	-15	NA	113875590	113797873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_113799416_113801482_113801679_113803157_113803282_113803797_113803878_113804672_113804752_113804867_113805047_113808297_113808438_113809062_113809255_113812275_113812505_113813884_113813956_113815173_113815383_113817657_113817838_113823604_113823701_113827232_113827361_113829196_113829346_113830866_113830944_113831919_113831994_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113852500_113852634_113854257_113854336_113875444
transcript_39685.nic	chr11	-	4541	24	NIC	ENSG00000048028.11	novel	4669	25	NA	NA	-20	-52	combination_of_known_junctions	FALSE	canonical	3	463	junction_16	77.0317981135383	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGATACAACTATGCAGATT	-113865276	True	NA	14	True	TTTAAA	-30	NA	113875590	113797925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_113799416_113801482_113801679_113803157_113803282_113803797_113803878_113804672_113804752_113804867_113805047_113808297_113808438_113809062_113809255_113812275_113812505_113813884_113813956_113815173_113815383_113817657_113817838_113823604_113823701_113827232_113827361_113829196_113829346_113830866_113830944_113831919_113831994_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113852500_113852634_113854257_113854336_113875444
transcript_39693.nic	chr11	-	4375	24	NIC	ENSG00000048028.11	novel	4669	25	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	463	junction_16	77.0317981135383	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-113865276	True	NA	NA	False	NA	NA	NA	113875590	113798091	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_113799416_113801482_113801679_113803157_113803282_113803797_113803878_113804672_113804752_113804867_113805047_113808297_113808438_113809062_113809255_113812275_113812505_113813884_113813956_113815173_113815383_113817657_113817838_113823604_113823701_113827232_113827361_113829196_113829346_113830866_113830944_113831919_113831994_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113852500_113852634_113854257_113854336_113875444
transcript_3970.nic	chr1	-	3517	20	ISM	ENSG00000075151.24	ENST00000634879.2	5325	34	-75	54977	-14	30815	5prime_fragment	FALSE	canonical	3	123	junction_11	36.7268875066752	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGTGAAAGAAAGAAAAACC	-21176900	False	NA	NA	False	NA	NA	NA	21176911	20862295	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_20862333_20864475_20864713_20865115_20865263_20879322_20879521_20886200_20886372_20893516_20893637_20895367_20895502_20899696_20899944_20904882_20904972_20941490_20942331_20950002_20950109_20969473_20969597_20973001_20973100_20980333_20980449_20981047_20981228_21002712_21002809_21050865_21050995_21089137_21089214_21176174_21176359_21176721
transcript_39700.nnic	chr11	-	4501	23	NIC	ENSG00000048028.11	novel	4669	25	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	72	junction_22	135.101071745478	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGTGCAGTATGGTC	-113865262	True	NA	-6	True	AATAAA	-15	NA	113875576	113797873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_113799416_113801482_113801679_113803157_113803282_113803797_113803878_113804672_113804752_113804867_113805047_113808297_113808438_113809062_113809255_113812275_113812505_113813884_113813956_113815173_113815383_113817657_113817838_113823604_113823701_113827232_113827361_113829196_113829346_113830866_113830944_113831919_113831994_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113852500_113852634_113875444
transcript_39716.known	chr11	-	3431	22	FSM	ENSG00000048028.11	ENST00000545540.5	3431	22	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_21	135.886323706698	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAGAGATTAGAAATATAAA	-113865256	True	NA	NA	False	AATACA	-26	NA	113875570	113798804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_113799416_113801482_113801679_113803157_113803282_113803797_113803878_113804672_113804752_113804867_113805047_113808297_113808438_113809062_113809255_113812275_113812505_113813884_113813956_113815173_113815383_113817657_113817838_113823604_113823701_113827232_113827361_113829196_113829346_113830866_113830944_113831919_113831994_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113875444
transcript_3972.nic	chr1	-	3520	20	NIC	ENSG00000075151.24	novel	6397	37	NA	NA	-14	30815	combination_of_known_junctions	FALSE	canonical	3	88	junction_11	41.3933231598535	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGTGAAAGAAAGAAAAACC	-21176900	False	NA	NA	False	NA	NA	NA	21176911	20862295	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_20862333_20864475_20864713_20865115_20865263_20879322_20879521_20886200_20886372_20893516_20893637_20895367_20895502_20899696_20899944_20904882_20904972_20941490_20942331_20950002_20950112_20969473_20969597_20973001_20973100_20980333_20980449_20981047_20981228_21002712_21002809_21050865_21050995_21089137_21089214_21176174_21176359_21176721
transcript_39749.known	chr11	-	1900	15	FSM	ENSG00000048028.11	ENST00000537706.5	1900	15	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_7	61.8321047973742	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATGTTGTTCTGTTTCTT	-113865214	True	NA	NA	False	AATAAA	-14	NA	113875528	113813754	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_113813956_113815173_113815383_113817657_113817838_113823604_113823701_113827232_113827361_113829196_113829346_113830866_113830944_113831919_113831994_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113852500_113852634_113854257_113854336_113875444
transcript_39761.nic	chr11	-	2169	7	ISM	ENSG00000048028.11	ENST00000542033.5	852	8	-57	1216	-20	-1216	5prime_fragment	FALSE	canonical	3	486	junction_6	38.9900272149459	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTTTATAGTAGTATAAT	-113865276	True	NA	NA	False	AAAAAG	-17	NA	113875590	113832098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113852500_113852634_113854257_113854336_113875444
transcript_39768.known	chr11	+	2205	9	FSM	ENSG00000166736.12	ENST00000504030.7	2205	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_7	6.26498204307083	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTTCTTTTTTTTTTCT	113974335	True	NA	5	True	AATAAA	-19	NA	113975107	113990313	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_113975393_113977770_113977923_113979232_113979278_113981202_113981313_113983119_113983290_113986014_113986176_113986517_113986729_113986824_113987047_113989464
transcript_39769.known	chr11	+	2221	8	FSM	ENSG00000166736.12	ENST00000506841.6	2221	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_7	6.16110247224224	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTTCTTTTTTTTTTCT	113974415	True	NA	5	True	AATAAA	-19	NA	113975187	113990313	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_113975393_113977770_113977923_113979232_113979278_113981202_113981313_113983119_113983290_113986014_113986176_113986517_113987047_113989464
transcript_39770.known	chr11	+	1385	8	FSM	ENSG00000166736.12	ENST00000510849.5	1385	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	13.9970842444753	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCAGGACCCAGGGAATG	113974513	False	NA	NA	False	NA	NA	NA	113975285	113989832	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_113975393_113977770_113977923_113979232_113979278_113981202_113981313_113983119_113983290_113986517_113986729_113986824_113987047_113989464
transcript_39779.known	chr11	+	1080	7	FSM	ENSG00000076043.11	ENST00000265881.10	1080	7	0	0	0	0	multi-exon	TRUE	canonical	3	756	junction_4	81.5381642068438	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTTGTACCATCTATTC	114426082	True	NA	32	True	AATAAA	-39	NA	114439466	114450279	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_114439676_114440655_114440740_114443855_114443934_114444540_114444653_114445978_114446088_114447825_114447880_114449845
transcript_39781.known	chr11	+	791	7	FSM	ENSG00000076043.11	ENST00000539754.5	791	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	328.399993233184	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCTGATGGCTTGGCAGAG	114426086	True	NA	NA	False	NA	NA	NA	114439470	114450039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_114439676_114440655_114440740_114443855_114443934_114444585_114444653_114445978_114446088_114447825_114447880_114449845
transcript_39793.known	chr11	+	664	6	FSM	ENSG00000076043.11	ENST00000539119.5	664	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	354.297389208557	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGTTAACTTGCATCTC	114426197	False	NA	NA	False	NA	NA	NA	114439581	114450062	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_114439676_114443855_114443934_114444540_114444653_114445978_114446088_114447825_114447880_114449845
transcript_39796.known	chr11	+	1908	5	FSM	ENSG00000076053.12	ENST00000542140.5	1908	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	257.315346413695	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGGGTGTGTGTTATTTT	114394801	True	NA	6	True	TATAAA	-2	NA	114400665	114408909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_114400768_114401697_114401861_114402831_114402916_114405705_114405800_114407444
transcript_39797.known	chr11	+	4243	5	FSM	ENSG00000076053.12	ENST00000540163.5	4243	5	0	0	0	0	multi-exon	TRUE	canonical	3	263	junction_3	155.551438437579	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTAAGTACAAAATTCTCAA	114398702	True	NA	NA	False	AATAAA	-18	NA	114400029	114410607	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_114400768_114401697_114401861_114402827_114402916_114405708_114405800_114407444
transcript_398.known	chr1	-	1083	5	FSM	ENSG00000186891.14	ENST00000379268.7	1083	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	2.1650635094611	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTGGATGCATGCTGG	-1206550	True	NA	-4	True	AATAAA	-15	NA	1206592	1203507	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1203969_1204033_1204237_1204398_1204487_1205369_1205493_1206384
transcript_39800.known	chr11	+	449	5	FSM	ENSG00000076043.11	ENST00000538198.5	449	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	383.70911834357	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGATGAAAAGAAGAGGAAAA	114426161	True	NA	NA	False	AAGAAA	-6	NA	114439545	114449917	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_114439676_114440655_114440740_114445978_114446088_114447825_114447880_114449845
transcript_39806.known	chr11	+	539	4	FSM	ENSG00000076043.11	ENST00000543131.5	539	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	440.685324869748	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACCTTCGGTTAACTTG	114426126	True	NA	NA	False	NA	NA	NA	114439510	114450056	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_114439676_114445978_114446088_114447825_114447880_114449845
transcript_39808.known	chr11	+	867	3	FSM	ENSG00000076053.12	ENST00000545678.1	867	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	326.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTGCAAGAAATTTCTT	114394809	True	NA	NA	False	GATAAA	-30	NA	114400673	114408123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_114400768_114405705_114405800_114407444
transcript_39809.known	chr11	+	710	3	FSM	ENSG00000076043.11	ENST00000539275.5	710	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	421.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTTGTACCATCTATTC	114426099	True	NA	32	True	AATAAA	-39	NA	114439483	114450279	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_114439676_114440655_114440740_114449845
transcript_39810.known	chr11	-	1980	1	FSM	ENSG00000180425.11	ENST00000623205.2	1980	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTGTTCCTAAGGAACT	-114399839	True	NA	NA	False	AATAAA	-19	NA	114400511	114398531	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_114398500_114400500
transcript_39811.known	chr11	+	452	3	FSM	ENSG00000076043.11	ENST00000544196.5	452	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	421	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTGTTTTTTTCTGTT	114426081	True	NA	4	True	AATAAA	-16	NA	114439465	114441902	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_114439676_114440655_114440740_114441744
transcript_39813.known	chr11	-	1246	10	FSM	ENSG00000182985.18	ENST00000616271.4	1246	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	52.3216547478724	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTTCAATGAGGTGT	NA	False	NA	-83	True	AAGAAA	-28	NA	115240421	115176466	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_115176593_115178643_115178776_115198405_115198439_115209573_115209658_115214607_115214781_115217891_115217992_115229112_115229272_115231352_115231491_115238499_115238653_115240273
transcript_39814.nnic	chr11	-	2532	11	NNC	ENSG00000137656.12	novel	2192	10	NA	NA	-224	0	at_least_one_novel_splicesite	TRUE	canonical	3	11	junction_1	42.4086076168506	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTTCTTAACTGGGTAT	NA	False	NA	-10	True	AATAAA	-22	NA	116773211	116748172	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_116748576_116756227_116756344_116757145_116757228_116757765_116757951_116758268_116758408_116759073_116759180_116760734_116760953_116762552_116763267_116765361_116765447_116770128_116770223_116772821
transcript_39817.known	chr11	-	2192	10	FSM	ENSG00000137656.12	ENST00000260210.5	2192	10	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_7	13.4329611197399	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTTCTTAACTGGGTAT	-116769194	True	NA	-10	True	AATAAA	-22	NA	116772987	116748172	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_116748576_116757145_116757228_116757765_116757951_116758268_116758408_116759073_116759180_116760734_116760953_116762552_116763267_116765361_116765447_116770128_116770223_116772821
transcript_39823.known	chr11	-	6539	14	FSM	ENSG00000109917.11	ENST00000227322.8	6539	14	0	0	0	0	multi-exon	TRUE	canonical	3	585	junction_6	32.8363343275556	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAGTGTTAGAATTCATT	-116781782	True	NA	2	True	AATAAA	-22	NA	116788023	116773798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_116779060_116779771_116779838_116782157_116782245_116782918_116783030_116783529_116783620_116784377_116784449_116784854_116784922_116785098_116785147_116785513_116785637_116785795_116785883_116786510_116786582_116786968_116787060_116787481_116787644_116787819
transcript_39828.known	chr11	-	6364	25	FSM	ENSG00000160584.17	ENST00000445177.6	6364	25	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_5	20.1720034260909	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTTTTGTCCTGCCTTTT	-117094841	True	NA	-1	True	ATTAAA	-29	NA	117098428	116843401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_116845630_116846382_116846554_116847475_116847609_116849119_116849284_116857809_116858700_116859264_116859605_116861273_116861384_116861840_116861927_116862201_116862328_116863667_116863819_116867945_116868090_116870330_116870402_116873480_116873637_116873902_116874057_116875157_116875268_116875373_116875452_116875865_116876010_116876252_116876364_116876923_116877043_116896252_116896377_116897192_116897318_116927218_116927381_116954043_116954108_116956947_116957065_117098142
transcript_39831.known	chr11	-	3858	24	FSM	ENSG00000160584.17	ENST00000446921.6	3858	24	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_16	26.6341878455645	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCACAGTATCTAGCAG	-117094850	True	NA	NA	False	AATGAA	-13	NA	117098437	116845592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_116845630_116846382_116846554_116847475_116847609_116849119_116849284_116857809_116858520_116859264_116859605_116861273_116861384_116861840_116861927_116862201_116862328_116863667_116863819_116867945_116868090_116870330_116870402_116873480_116873637_116873902_116874057_116875157_116875268_116875373_116875452_116876252_116876364_116876923_116877043_116896252_116896377_116897192_116897318_116927218_116927381_116954043_116954108_116956947_116957065_117098142
transcript_3984.known	chr1	-	1343	2	FSM	ENSG00000075151.24	ENST00000634778.1	1343	2	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGTTTTTATGTTT	-21176808	False	8078	1	True	AATAAA	-19	NA	21176819	21175113	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_21176359_21176721
transcript_39840.nic	chr11	-	2642	14	ISM	ENSG00000160584.17	ENST00000375300.6	6207	24	-17	26112	-8	-735	5prime_fragment	FALSE	canonical	3	76	junction_5	17.3699734119359	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGGGGAACTTTGGGT	-117094858	True	NA	NA	False	AATAAA	-14	NA	117098445	116869526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_116870402_116873480_116873637_116873902_116874057_116875157_116875268_116875373_116875452_116875865_116876010_116876252_116876364_116876923_116877043_116896252_116896377_116897192_116897318_116927218_116927381_116954043_116954108_116956947_116957065_117098142
transcript_39842.nic	chr11	-	2092	7	NIC	ENSG00000160584.17	novel	715	6	NA	NA	-8	1074	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	45.9688904465715	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTGCAGGTTTTTGTG	-117094858	True	NA	NA	False	AATAAA	-13	NA	117098445	116892770	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_116893968_116896252_116896377_116897192_116897318_116927218_116927381_116954043_116954108_116956947_116957065_117098142
transcript_39843.known	chr11	-	899	4	FSM	ENSG00000118137.10	ENST00000236850.5	899	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.24721912892465	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTTCTTTCTTTTGGGA	-116837607	False	NA	2	True	AATAAA	-18	NA	116837622	116835750	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_116836412_116837000_116837158_116837344_116837408_116837604
transcript_39844.known	chr11	+	4175	6	FSM	ENSG00000168092.14	ENST00000527958.6	4175	6	0	0	0	0	multi-exon	FALSE	canonical	3	575	junction_1	56.1177333825948	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGGTGTCTTTCTGTC	117124582	True	NA	23	True	TATAAA	-19	NA	117144286	117171045	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_117144419_117152440_117152529_117159933_117160024_117161144_117161262_117163769_117163893_117167420
transcript_3985.known	chr1	-	5099	19	FSM	ENSG00000117298.16	ENST00000415912.6	5099	19	0	0	0	0	multi-exon	TRUE	canonical	3	129	junction_18	18.2730490336904	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGTCTGGGTGTCTGTC	-21342260	True	NA	-1	True	AATAAA	-18	NA	21345504	21217246	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_21220132_21221746_21221843_21225249_21225441_21227158_21227227_21227930_21228042_21233557_21233662_21235849_21235928_21236745_21236845_21238133_21238245_21244988_21245104_21247220_21247364_21255946_21256139_21257524_21257591_21258692_21258840_21260270_21260393_21272698_21272912_21279190_21279333_21290069_21290157_21345375
transcript_39850.known	chr11	+	685	5	FSM	ENSG00000168092.14	ENST00000533206.1	685	5	0	0	0	0	multi-exon	FALSE	canonical	3	575	junction_1	59.2341751018785	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGCCAGGCGCTGTGGCT	117124677	True	NA	NA	False	NA	NA	NA	117144381	117164122	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_117144419_117152440_117152529_117159933_117160024_117161144_117161262_117163769
transcript_39854.known	chr11	+	4396	26	FSM	ENSG00000149577.16	ENST00000324225.9	4396	26	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_5	5.97943141109587	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTTGGGGCCCTTGTTTG	117178628	True	NA	14	True	AATAAA	-13	NA	117178742	117197442	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_117179447_117181415_117181538_117181806_117181972_117182059_117182106_117182518_117182621_117182722_117182807_117183778_117183879_117184073_117184140_117186129_117186224_117186583_117186637_117187377_117187450_117187627_117187700_117188707_117188827_117189168_117189243_117189334_117189402_117189951_117190026_117190165_117190290_117190622_117190741_117191877_117192015_117192253_117192363_117192573_117192651_117192819_117192867_117193152_117193259_117193852_117193964_117195801_117195916_117196003
transcript_3986.known	chr1	-	5067	19	FSM	ENSG00000117298.16	ENST00000374893.11	5067	19	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_18	32.994621709127	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCATGTGTCTGGGTGTCT	-21289701	True	NA	-4	True	AATAAA	-15	NA	21290463	21217249	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_21220132_21221746_21221843_21225249_21225441_21227158_21227227_21227930_21228042_21233557_21233662_21235849_21235928_21236745_21236845_21238133_21238245_21244988_21245104_21247220_21247364_21255946_21256139_21257524_21257591_21258692_21258840_21260270_21260393_21272698_21272912_21279190_21279333_21290069_21290157_21290363
transcript_39862.known	chr11	-	3367	16	FSM	ENSG00000160613.15	ENST00000676339.1	3367	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	40.1162754447064	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTCGCAATCTCTCCTT	-117229966	True	NA	-9	True	AATAAA	-19	NA	117232094	117205067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_117206357_117206680_117206799_117207066_117207161_117207969_117208065_117208896_117209054_117218465_117218569_117219056_117219165_117219590_117219759_117223207_117223309_117224077_117224217_117224700_117224756_117225930_117226022_117227156_117227323_117228215_117228351_117229376_117229857_117232026
transcript_39863.known	chr11	+	3786	5	FSM	ENSG00000149591.17	ENST00000392951.9	3786	5	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_1	35.3447308661418	416	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGCCTAGAGAATACCTAA	117191970	True	NA	NA	False	ATTAAA	-18	NA	117199369	117207464	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_117199433_117203001_117203194_117203306_117203485_117203781_117203885_117204214
transcript_39871.known	chr11	+	3477	15	FSM	ENSG00000167257.11	ENST00000300650.9	3477	15	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	10.2720643554472	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGTTAACTTTTTAAAAAAA	117230841	True	NA	NA	False	ATTAAA	-15	NA	117232670	117286454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_117232727_117234266_117234380_117238600_117239112_117239800_117239861_117244444_117244586_117246808_117246949_117279907_117280005_117280170_117280260_117281313_117281405_117281599_117281699_117281893_117282271_117282403_117282537_117282745_117282851_117283114_117283211_117285085
transcript_39874.known	chr11	+	2695	15	FSM	ENSG00000167257.11	ENST00000531452.5	2695	15	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	21.7443401033605	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAGTAGTTTGACTTCTT	117230906	True	NA	6	True	GATAAA	-31	NA	117232735	117285688	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_117232776_117234266_117234380_117238600_117239112_117239800_117239861_117244444_117244586_117246808_117246949_117279907_117280005_117280170_117280260_117281313_117281405_117281599_117281699_117281893_117282271_117282403_117282537_117282745_117282851_117283114_117283211_117285085
transcript_39879.known	chr11	-	1465	9	FSM	ENSG00000186318.18	ENST00000513780.5	1465	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	5.04820512657717	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGACCACACCTCCGTGGT	-117315262	False	NA	NA	False	NA	NA	NA	117315798	117289534	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_117289808_117290487_117290660_117290899_117291050_117291711_117291814_117293053_117293189_117293870_117293934_117295130_117295348_117296872_117296962_117315534
transcript_39880.known	chr11	-	5835	9	FSM	ENSG00000186318.18	ENST00000313005.11	5835	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_6	3.51559027760631	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTAGGGTTACTTTTTTT	-117315720	True	NA	-2	True	AGTAAA	-21	NA	117316256	117285697	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_117289808_117290487_117290660_117290899_117291050_117291711_117291814_117293053_117293189_117293870_117294009_117295130_117295348_117296872_117296962_117315534
transcript_39881.known	chr11	-	1408	9	FSM	ENSG00000186318.18	ENST00000445823.6	1408	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	5.62222153601225	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGACCACACCTCCGTGGT	-117315262	False	NA	NA	False	NA	NA	NA	117315798	117289534	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_117289808_117290487_117290660_117290899_117291050_117291711_117291814_117293053_117293189_117293870_117294009_117295262_117295348_117296872_117296962_117315534
transcript_39888.nic	chr11	+	946	6	ISM	ENSG00000167257.11	ENST00000300650.9	3477	15	-33	39614	13	0	5prime_fragment	FALSE	canonical	3	68	junction_1	11.2356575241505	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGCGGGAAGAAACAAAGA	117230808	True	NA	-18	True	ATTAAA	-22	NA	117232637	117246840	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_117232727_117234266_117234380_117238600_117239112_117239800_117239861_117244444_117244586_117246808
transcript_39892.known	chr11	+	5629	33	FSM	ENSG00000110274.16	ENST00000278935.8	5629	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.2883738507403	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGGGTTGCCCTTGCT	117326990	True	NA	30	True	AATAAA	-31	NA	117327853	117413266	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_117327905_117335604_117335681_117338565_117338669_117344165_117344278_117351789_117351989_117361834_117361994_117362403_117362539_117363428_117363507_117371079_117371467_117373750_117373832_117375707_117375792_117380613_117380706_117381700_117381869_117382795_117382943_117387202_117387413_117390776_117390909_117390998_117391216_117392225_117392304_117392495_117392628_117393003_117393127_117394349_117394494_117394919_117395004_117395122_117395192_117395546_117395723_117396053_117396181_117396549_117396612_117397090_117397314_117407924_117408033_117408889_117409029_117409617_117409966_117410827_117410895_117411794_117411918_117412071
transcript_39893.known	chr11	+	585	5	FSM	ENSG00000110274.16	ENST00000527609.5	585	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	9.12414379544733	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACAGAGACCCCCCCAAA	117327221	False	NA	NA	False	AAAAAG	-17	NA	117328084	117351959	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_117328209_117335604_117335681_117338565_117338669_117344165_117344278_117351789
transcript_39895.known	chr11	+	492	4	FSM	ENSG00000110274.16	ENST00000533570.1	492	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	9.2736184954957	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACAGAGACCCCCCCAAAA	117328091	True	NA	NA	False	AAAAAG	-18	NA	117328102	117351960	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_117328209_117338565_117338669_117344165_117344278_117351789
transcript_39897.known	chr11	+	548	3	FSM	ENSG00000167257.11	ENST00000534428.5	548	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	6.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTGCTCTGAAGAGAAAT	117230795	True	NA	NA	False	NA	NA	NA	117232624	117238933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_117232727_117234266_117234380_117238600
transcript_39898.known	chr11	+	774	1	FSM	ENSG00000278768.3	ENST00000618857.1	774	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGCCTTCTGACCATCA	117292787	False	NA	6	True	AATAAA	-18	NA	117292797	117293571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_117292800_117293600
transcript_399.known	chr1	-	727	4	FSM	ENSG00000186891.14	ENST00000486728.5	727	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	1.69967317119759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCCGTCCTCCGGGGC	-1205638	False	NA	NA	False	NA	NA	NA	1205680	1203843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1203969_1204033_1204237_1204398_1204487_1205369
transcript_39902.known	chr11	-	634	11	FSM	ENSG00000255245.4	ENST00000614497.5	634	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	100.954494699345	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTGGCATCGCCAACTC	-117874609	True	NA	-82	True	NA	NA	NA	117876628	117820221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_117820373_117820665_117820697_117820858_117820896_117822405_117822481_117822678_117822718_117839780_117839831_117841147_117841185_117841790_117841866_117841989_117842029_117842718_117842782_117876591
transcript_39904.known	chr11	-	1678	8	FSM	ENSG00000137726.17	ENST00000526014.6	1678	8	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_7	13.2649607490361	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTCGGAGGTGCTTTCC	-117874639	True	NA	-9	True	AATAAA	-18	NA	117876658	117836980	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_117838278_117839780_117839831_117840318_117840369_117841147_117841185_117841790_117841866_117841989_117842029_117842718_117842782_117876591
transcript_39906.known	chr11	-	656	7	FSM	ENSG00000137726.17	ENST00000540359.6	656	7	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_6	13.6920495990272	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCATGCCAACACCAGGAA	-117874710	True	NA	NA	False	GGGGCT	-45	NA	117876729	117839576	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_117839831_117840318_117840369_117841147_117841185_117841790_117841866_117841989_117842029_117842718_117842782_117876591
transcript_39910.known	chr11	+	5516	13	FSM	ENSG00000137648.19	ENST00000437212.8	5516	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	1.23322071557906	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTAAAATATTCTGAAGTT	118077036	True	NA	NA	False	ATTAAA	-13	NA	118077077	118121890	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_118077306_118094815_118094856_118098984_118099099_118103100_118103254_118104690_118104821_118107773_118107876_118108855_118108897_118111740_118111901_118113268_118113436_118114828_118114928_118115137_118115281_118117304_118117455_118117901
transcript_39911.known	chr11	+	2052	13	FSM	ENSG00000137648.19	ENST00000522824.5	2052	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	1.23322071557906	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCTAGCTGGAATGCTTG	118077052	True	NA	NA	False	ATTAAA	-23	NA	118077093	118118457	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_118077306_118094815_118094856_118098984_118099099_118103100_118103254_118104690_118104821_118107788_118107876_118108855_118108897_118111740_118111901_118113268_118113436_118114828_118114928_118115137_118115281_118117304_118117455_118117901
transcript_39912.known	chr11	-	4487	5	FSM	ENSG00000177098.9	ENST00000324727.9	4487	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	3.74165738677394	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGATTTGGGGGCTTCC	-118152590	True	NA	NA	False	AATAAA	-16	NA	118152823	118133376	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_118137121_118141206_118141337_118143832_118144062_118145056_118145230_118152612
transcript_39916.known	chr11	-	4937	4	FSM	ENSG00000149575.9	ENST00000278947.6	4937	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTCGAGTGTGGCTTTAT	-118176624	True	NA	4	True	AATAAA	-17	NA	118176639	118162805	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_118167087_118168084_118168296_118168584_118168752_118176361
transcript_39917.known	chr11	-	3983	6	FSM	ENSG00000160588.10	ENST00000278949.9	3983	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	2.65329983228432	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTGGTGTGTGCATATC	-118252110	True	NA	1	True	AATAAA	-22	NA	118252365	118226689	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_118229921_118233459_118233524_118235423_118235590_118237049_118237261_118240210_118240378_118252221
transcript_39918.known	chr11	-	963	5	FSM	ENSG00000160588.10	ENST00000446386.2	963	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5.40254569624358	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATATGTATTCTTTGTTT	-118252065	True	NA	NA	False	NA	NA	NA	118252320	118229453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_118229921_118233459_118233524_118235423_118235590_118240210_118240378_118252221
transcript_39919.known	chr11	-	2622	6	FSM	ENSG00000149573.9	ENST00000278937.7	2622	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	2.68328157299975	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTGTATATACATATCTA	-118264230	True	NA	3	True	AATAAA	-33	NA	118264297	118253415	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_118255234_118257237_118257314_118260053_118260202_118262437_118262649_118262930_118263098_118264095
transcript_39920.known	chr11	-	701	5	FSM	ENSG00000167286.10	ENST00000300692.9	701	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGTGCCTGGGCTTCTTA	NA	False	NA	NA	False	AATAAA	-19	NA	118342705	118339074	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_118339228_118339450_118339495_118339774_118339907_118340374_118340594_118342552
transcript_39923.known	chr11	+	6088	20	FSM	ENSG00000110344.10	ENST00000252108.8	6088	20	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_6	18.8986215036135	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGTTATCACTTTATTC	118354262	True	NA	15	True	AATAAA	-19	NA	118359599	118399211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_118359675_118365039_118365202_118368630_118368805_118369422_118369536_118371513_118371667_118372506_118372667_118373085_118373289_118373493_118373686_118374895_118375230_118376573_118376695_118379445_118379751_118381390_118381524_118382588_118382777_118384634_118384736_118384831_118384946_118386437_118386613_118389724_118389906_118390656_118390805_118392737_118392896_118396313
transcript_39926.known	chr11	+	6061	20	FSM	ENSG00000110344.10	ENST00000431736.6	6061	20	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_6	49.962146335821	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACCTTTGTTATCACTTT	118354306	True	NA	11	True	AATAAA	-15	NA	118359643	118399207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_118359675_118365039_118365202_118368630_118368805_118369422_118369536_118371513_118371667_118372506_118372688_118373085_118373289_118373493_118373686_118374895_118375230_118376573_118376695_118379445_118379751_118381390_118381524_118382588_118382777_118384634_118384736_118384831_118384946_118386437_118386613_118389724_118389906_118390656_118390805_118392737_118392896_118396313
transcript_39930.known	chr11	-	1819	13	FSM	ENSG00000118096.10	ENST00000264020.6	1819	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	25.648261799454	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCTATTATATTGTCAGA	-118564998	True	NA	NA	False	AGTAAA	-17	NA	118566035	118544542	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_118545012_118545408_118545495_118545792_118545854_118551785_118551853_118552213_118552336_118554458_118554588_118554989_118555084_118555247_118555323_118556905_118557046_118557737_118557891_118559784_118559865_118564964_118565062_118565789
transcript_39932.known	chr11	-	1562	12	FSM	ENSG00000118096.10	ENST00000264021.8	1562	12	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_9	13.0371370380448	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCTATTATATTGTCAGA	-118564894	True	NA	NA	False	AGTAAA	-17	NA	118565931	118544542	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_118545012_118545408_118545495_118545792_118545854_118551785_118551853_118552213_118552336_118554458_118554588_118554989_118555084_118555247_118555323_118556905_118557046_118559784_118559865_118564964_118565062_118565789
transcript_39935.known	chr11	+	16600	36	FSM	ENSG00000118058.24	ENST00000534358.8	16600	36	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_32	16.6479513969223	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTAAGCTTCCTTTTG	118433698	True	NA	11	True	AATAAA	-22	NA	118436491	118526832	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_118436945_118468774_118468845_118471661_118474316_118476804_118476983_118477966_118478202_118480173_118480239_118481714_118482093_118482421_118482496_118484182_118484315_118484861_118484976_118488613_118488761_118489791_118489888_118490128_118490250_118491195_118491319_118491743_118491929_118493056_118493231_118494287_118494399_118494693_118494768_118495699_118495894_118496260_118496368_118497935_118498074_118498369_118498529_118499302_118499421_118499834_118499914_118500986_118501148_118501671_118501858_118502397_118506647_118507528_118507610_118509135_118509201_118509947_118510119_118511950_118512026_118519617_118519793_118519956_118520065_118520801_118520886_118521287_118521418_118521896
transcript_39936.known	chr11	+	3994	10	FSM	ENSG00000095139.15	ENST00000264028.5	3994	10	0	0	0	0	multi-exon	FALSE	canonical	3	1045	junction_7	86.2950723168643	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATCTGTGAGAGTATTCA	118554896	True	NA	17	True	ATTAAA	-30	NA	118572408	118603033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_118572551_118581245_118581510_118583178_118583359_118583808_118584015_118584479_118584645_118590340_118590507_118592708_118592857_118593589_118593699_118597706_118597912_118600624
transcript_39944.known	chr11	+	2420	9	FSM	ENSG00000149582.16	ENST00000313236.10	2420	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	18.2619823677497	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACATATCTCTGCTTCAT	118530424	True	NA	15	True	AATAAA	-15	NA	118531191	118535829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_118531235_118531774_118531872_118532149_118532462_118532916_118533208_118533419_118533552_118533856_118533888_118534028_118534130_118534265_118534356_118534506
transcript_39945.known	chr11	+	1456	9	FSM	ENSG00000149582.16	ENST00000354284.8	1456	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	19.2337593829184	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTAAAAAAAAAGGAAGGAAG	118530431	True	NA	NA	False	NA	NA	NA	118531198	118546484	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_118531235_118531774_118531872_118532149_118532462_118532916_118533208_118533419_118533552_118533856_118533888_118534028_118534130_118534265_118534356_118546118
transcript_39956.known	chr11	+	2395	8	FSM	ENSG00000149582.16	ENST00000359862.8	2395	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	18.3614503006396	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATATCTCTGCTTCATTTC	118531044	False	NA	18	True	AATAAA	-18	NA	118531087	118535832	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_118531235_118531774_118531872_118532149_118532462_118532916_118533208_118533856_118533888_118534028_118534130_118534265_118534356_118534506
transcript_39957.known	chr11	+	2228	8	FSM	ENSG00000149582.16	ENST00000442938.6	2228	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	22.8410657744836	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGAAGATAAGTGTTATCA	118531044	False	NA	NA	False	AATAAA	-13	NA	118531087	118547280	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_118531235_118531774_118531872_118532149_118532462_118532916_118533208_118533856_118533888_118534028_118534130_118534268_118534356_118546118
transcript_3998.nnic	chr1	+	4389	19	NNC	ENSG00000142794.19	novel	4401	18	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	32.1212978843909	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGACTGTTGGATTGTT	21438270	True	NA	NA	False	ATTAAA	-16	NA	21440126	21484900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_21440349_21444947_21445220_21465734_21465818_21466086_21466157_21466995_21467310_21468440_21468586_21468687_21468898_21470631_21470735_21471568_21471784_21472842_21472916_21473379_21473586_21474899_21474952_21478143_21478308_21479348_21479401_21480050_21480224_21480929_21480982_21481596_21481770_21482483_21482536_21483142
transcript_39984.known	chr11	+	575	5	FSM	ENSG00000167283.9	ENST00000529770.5	575	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	3261.66790154976	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGTTTTCTCCATCAG	118354384	True	NA	16	True	AATAAA	-17	NA	118401618	118409199	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_118401718_118403923_118403986_118405656_118405710_118406936_118407098_118408999
transcript_39993.known	chr11	+	900	4	FSM	ENSG00000167283.9	ENST00000529790.5	900	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	3538.70374886373	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGTTAGAGTACTTGT	118354375	True	NA	NA	False	NA	NA	NA	118401609	118409577	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_118401718_118405656_118405710_118406936_118407098_118408999
transcript_39998.known	chr11	+	457	3	FSM	ENSG00000167283.9	ENST00000529460.1	457	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	3787	1075	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGTTTTCTCCATCAG	118354398	True	NA	16	True	AATAAA	-17	NA	118401632	118409199	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_118401729_118406936_118407098_118408999
transcript_4.known	ERCC-00009	+	968	1	FSM	ERCC-00009A	DQ668364	968	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	658	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00009_+_0_1000
transcript_40.known	ERCC-00108	+	1005	1	FSM	ERCC-00108A	DQ668365	1005	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	965	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00108_+_0_1000
transcript_4000.nnic	chr1	+	4211	19	NNC	ENSG00000142794.19	novel	4401	18	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	30.8188654745077	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGACTGTTGGATTGTT	21438262	True	NA	NA	False	ATTAAA	-16	NA	21440118	21484900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_21440349_21444947_21445220_21465734_21465818_21466086_21466157_21467181_21467310_21468440_21468586_21468687_21468898_21470631_21470735_21471568_21471784_21472842_21472916_21473379_21473586_21474899_21474952_21478143_21478308_21479348_21479401_21480050_21480224_21480929_21480982_21481596_21481770_21482483_21482536_21483142
transcript_40003.known	chr11	+	1992	2	FSM	ENSG00000118058.24	ENST00000534085.2	1992	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTGGGAGGCTGAGGC	118505601	False	NA	NA	False	AAAAAG	-44	NA	118505613	118508487	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_118506647_118507528
transcript_40004.known	chr11	+	1982	1	FSM	ENSG00000118058.24	ENST00000647638.1	1982	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAGAAAAAACTGA	118437147	False	NA	NA	False	TTTAAA	-28	NA	118437191	118439173	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_118437200_118439200
transcript_40005.known	chr11	+	720	3	FSM	ENSG00000167283.9	ENST00000690793.1	2788	3	286	1782	-1	-465	multi-exon	FALSE	canonical	0	0	junction_2	3577.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATATCTAGAAGTCCCC	118354397	True	NA	NA	False	GATAAA	-26	NA	118401631	118431496	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_118401718_118406936_118407098_118431023
transcript_40006.known	chr11	+	3098	6	FSM	ENSG00000149582.16	ENST00000524522.5	3098	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	24.2272573767647	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTCTGCTTCATTTCTT	118530434	True	NA	20	True	AATAAA	-20	NA	118531201	118535834	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_118532462_118532916_118533208_118533856_118533888_118534028_118534130_118534268_118534356_118534506
transcript_40011.nic	chr11	+	5014	18	NIC	ENSG00000019144.20	novel	5242	18	NA	NA	-31	0	combination_of_known_junctions	TRUE	canonical	3	69	junction_6	56.0093912046381	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGAGTGGAAGGCCGGT	118618767	True	NA	15	True	AATAAA	-15	NA	118621331	118658025	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_118621539_118624933_118625060_118627304_118628651_118631206_118631480_118631912_118632054_118632158_118632297_118635392_118635549_118638890_118639002_118639161_118639252_118643799_118643941_118644071_118644175_118645355_118645651_118645734_118645826_118647929_118648077_118650076_118650194_118650444_118650548_118655604_118655691_118656682
transcript_40022.nnic	chr11	+	2913	13	Fusion	ENSG00000019144.20_ENSG00000284246.1	novel	2519	5	NA	NA	88	0	multi-exon	FALSE	canonical	2	3	junction_1	57.2729211757179	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGAGTGGAAGGCCGGT	118635093	False	NA	15	True	AATAAA	-15	NA	118635116	118658025	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr11_+_118635247_118635392_118635549_118638890_118639002_118639161_118639252_118643799_118643941_118644071_118644175_118645355_118645651_118645734_118645826_118647929_118648077_118650076_118650194_118650444_118650548_118655604_118655691_118656682
transcript_40026.known	chr11	-	6152	14	FSM	ENSG00000110367.14	ENST00000620157.4	6152	14	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_13	141.016932132028	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTGTGTGGTATGTC	-118790857	False	25289	-4	True	AATAAA	-17	NA	118790948	118747765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_118752098_118754704_118754888_118755401_118755504_118756259_118756324_118757170_118757288_118758773_118758903_118759921_118760045_118763211_118763307_118765208_118765356_118768222_118768353_118779631_118779737_118781120_118781185_118786051_118786519_118790854
transcript_40027.nnic	chr11	-	2662	14	NNC	ENSG00000110367.14	novel	6152	14	NA	NA	47	0	at_least_one_novel_splicesite	FALSE	canonical	3	87	junction_13	123.137100672909	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCCCAAGTAAAAATTTCT	-118790998	False	NA	-25	True	AATACA	-16	NA	118791089	118751364	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_118752098_118754704_118754888_118755401_118755504_118756259_118756324_118757170_118757288_118758773_118758903_118759921_118760045_118763211_118763307_118765208_118765356_118768222_118768353_118779631_118779737_118781120_118781185_118786051_118786519_118790886
transcript_40028.known	chr11	-	6128	14	FSM	ENSG00000110367.14	ENST00000534980.7	6128	14	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_1	50.2005445643393	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGGTATGTCCTT	-118765875	True	NA	-1	True	AATAAA	-20	NA	118791164	118747762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_118752098_118754704_118754888_118755401_118755504_118756259_118756324_118757170_118757288_118758773_118758903_118759921_118760045_118763211_118763307_118765208_118765356_118768222_118768353_118779631_118779737_118781120_118781185_118786051_118786519_118791097
transcript_40034.nnic	chr11	-	2052	14	NNC	ENSG00000110367.14	novel	6152	14	NA	NA	-76	-545	at_least_one_novel_splicesite	FALSE	canonical	3	87	junction_13	123.137100672909	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTGCACTGTGTGCTG	-118790933	False	NA	-6	True	AATATA	-15	NA	118791024	118751909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_118752098_118754704_118754888_118755401_118755504_118756259_118756324_118757170_118757288_118758773_118758903_118759921_118760045_118763211_118763307_118765208_118765356_118768222_118768353_118779631_118779737_118781120_118781185_118786051_118786519_118790886
transcript_40045.known	chr11	-	1936	13	FSM	ENSG00000110367.14	ENST00000526070.2	1936	13	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_12	143.814768017753	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTAGCATAAATGACAGTA	-118790857	False	25289	-38	True	AATAAA	-13	NA	118790948	118754588	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_118754888_118755401_118755504_118756259_118756324_118757170_118757288_118758773_118758903_118759921_118760045_118763211_118763307_118765208_118765356_118768222_118768353_118779631_118779737_118781120_118781185_118786051_118786519_118790854
transcript_40047.nic	chr11	-	1975	13	ISM	ENSG00000110367.14	ENST00000534980.7	6128	14	-66	6826	-66	0	5prime_fragment	FALSE	canonical	3	455	junction_12	34.2039430800342	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTAGCATAAATGACAGTA	-118791139	False	NA	-38	True	AATAAA	-13	NA	118791230	118754588	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_118754888_118755401_118755504_118756259_118756324_118757170_118757288_118758773_118758903_118759921_118760045_118763211_118763307_118765208_118765356_118768222_118768353_118779631_118779737_118781120_118781185_118786051_118786519_118791097
transcript_4005.known	chr1	+	4401	18	FSM	ENSG00000142794.19	ENST00000318220.10	4401	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	30.8394660193698	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTATTTTCTAATCTCT	21438280	True	NA	NA	False	AATAAA	-16	NA	21440136	21485005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_21440349_21444947_21445220_21466086_21466157_21466995_21467310_21468440_21468586_21468687_21468898_21470631_21470735_21471568_21471784_21472842_21472916_21473379_21473586_21474899_21474952_21478143_21478308_21479348_21479401_21480050_21480224_21480929_21480982_21481596_21481770_21482483_21482536_21483142
transcript_40061.known	chr11	-	1286	2	FSM	ENSG00000287238.1	ENST00000664961.1	1286	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCTCTGTGTCTTTTT	-118729395	False	NA	NA	False	NA	NA	NA	118729412	118721103	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_118722076_118729098
transcript_40062.known	chr11	-	738	2	FSM	ENSG00000110367.14	ENST00000533239.1	738	2	0	0	0	0	multi-exon	FALSE	canonical	3	455	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATTTTGTATAAATGGTT	-118765860	True	NA	NA	False	NA	NA	NA	118791149	118785832	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_118786519_118791097
transcript_40065.known	chr11	-	7598	10	FSM	ENSG00000186174.13	ENST00000683865.1	7598	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	3.80383172636082	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGCCTCTTTGCATC	-118921240	True	NA	-2	True	ATTAAA	-19	NA	118925926	118896135	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_118899509_118899916_118900199_118900618_118902909_118902989_118903075_118903235_118903453_118907482_118907603_118908269_118908656_118909913_118910016_118918825_118918880_118925237
transcript_40066.known	chr11	-	10005	8	FSM	ENSG00000186174.13	ENST00000334801.7	10005	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	2.6954231805876	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGGCCACGGCAAAGGGCA	-118910862	False	NA	NA	False	NA	NA	NA	118910904	118893874	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_118899509_118899916_118900199_118900618_118902909_118902989_118903075_118903235_118903453_118907482_118907603_118908269_118908656_118909913
transcript_40071.known	chr11	+	1254	11	FSM	ENSG00000186166.9	ENST00000334418.6	1254	11	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	64.0440473424346	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTATCTACCTCCTAC	118994484	True	NA	69	True	ATTAAA	-18	NA	118998137	119015793	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_118998318_118998429_118998594_118999010_118999110_119010763_119010831_119011220_119011284_119011938_119012004_119012148_119012255_119013231_119013263_119014993_119015084_119015306_119015440_119015537
transcript_4008.nic	chr1	+	4126	18	NIC	ENSG00000142794.19	novel	4401	18	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	29.3078163104284	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGACTGTTGGATTGTT	21438264	True	NA	NA	False	ATTAAA	-16	NA	21440120	21484900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_21440349_21444947_21445220_21466086_21466157_21467181_21467310_21468440_21468586_21468687_21468898_21470631_21470735_21471568_21471784_21472842_21472916_21473379_21473586_21474899_21474952_21478143_21478308_21479348_21479401_21480050_21480224_21480929_21480982_21481596_21481770_21482483_21482536_21483142
transcript_40086.known	chr11	-	711	5	FSM	ENSG00000118181.11	ENST00000527791.5	711	5	0	0	0	0	multi-exon	FALSE	canonical	3	768	junction_3	7562.95641184716	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGAGTATGTCTGTTTC	-119018657	False	NA	-10	True	AATAAA	-17	NA	119018678	119015711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119015759_119015840_119015940_119017361_119017434_119017957_119018054_119018281
transcript_40088.known	chr11	-	508	5	FSM	ENSG00000118181.11	ENST00000532567.5	508	5	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_3	7760.36555195694	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGAGTATGTCTGTTTC	-118985601	True	NA	-10	True	AATAAA	-17	NA	119018330	119015711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119015759_119015840_119015940_119017361_119017546_119017924_119018054_119018281
transcript_40089.known	chr11	-	483	5	FSM	ENSG00000118181.11	ENST00000527673.2	483	5	0	0	0	0	multi-exon	FALSE	canonical	3	8677	junction_1	4495.84980843444	3063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATGAATGAGTATGTCT	-118985614	True	NA	-15	True	AATAAA	-12	NA	119018343	119015716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119015759_119015840_119015940_119017361_119017546_119017957_119018054_119018281
transcript_40095.known	chr11	+	588	3	FSM	ENSG00000186166.9	ENST00000534656.2	588	3	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGGGATAGGATTTAGC	118994521	True	NA	NA	False	NA	NA	NA	118998174	118999291	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_118998318_118998429_118998594_118999010
transcript_40097.known	chr11	-	1462	3	FSM	ENSG00000118181.11	ENST00000527853.1	1462	3	0	0	0	0	multi-exon	FALSE	canonical	3	8677	junction_1	6346.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATTAAATCAAATGAATG	-119016788	True	NA	-24	True	AATAAA	-3	NA	119018691	119015725	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119015759_119015840_119015940_119017361
transcript_401.known	chr1	-	1075	7	FSM	ENSG00000186827.11	ENST00000379236.4	1075	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCCGACCGGCACTGTGG	-1214113	False	NA	NA	False	AATAAA	-18	NA	1214153	1211339	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1211626_1211703_1211833_1211941_1212139_1212637_1212705_1212991_1213094_1213662_1213786_1213982
transcript_40101.known	chr11	-	2606	11	FSM	ENSG00000137700.18	ENST00000545985.5	2606	11	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_6	137.001605830005	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGTGATTCATTTTTTC	NA	False	NA	3	True	ATTAAA	-22	NA	119030906	119024350	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119025077_119025190_119025330_119025966_119026081_119026602_119026689_119026936_119027096_119027627_119027725_119027725_119027873_119028193_119028427_119029221_119029565_119030231_119030736_119030848
transcript_40106.nic	chr11	-	2680	10	ISM	ENSG00000137700.18	ENST00000545985.5	2606	11	34	5	0	0	intron_retention	FALSE	non_canonical	0	0	junction_6	124.222420989704	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTGTCAGTGATTCATT	-119027101	True	NA	-2	True	ATTAAA	-17	NA	119030872	119024355	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_119025077_119025190_119025330_119025966_119026081_119026602_119026689_119026936_119027096_119027627_119027725_119027725_119027873_119028193_119028427_119029221_119029565_119030231
transcript_40107.known	chr11	-	2102	10	FSM	ENSG00000137700.18	ENST00000330775.9	2102	10	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	120.174358925729	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGTGATTCATTTTTTC	NA	False	NA	3	True	ATTAAA	-22	NA	119030906	119024350	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119025077_119025190_119025330_119025966_119026081_119026602_119026689_119026936_119027096_119027627_119027725_119027725_119027873_119028193_119028427_119029221_119029565_119030848
transcript_40121.known	chr11	-	1912	9	FSM	ENSG00000137700.18	ENST00000638360.1	1912	9	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_6	123.543514601132	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCAGTTGGATATAGGTGG	-119027119	True	NA	-70	True	NA	NA	NA	119030890	119024423	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119025077_119025190_119025330_119025966_119026081_119026602_119026689_119026936_119027096_119027627_119027771_119028193_119028427_119029221_119029565_119030848
transcript_40125.nic	chr11	-	2759	9	NIC	ENSG00000137700.18	novel	2304	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	20	junction_8	108.183871256301	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTGTCAGTGATTCATT	-119027117	True	NA	-2	True	ATTAAA	-17	NA	119030888	119024355	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_119025077_119025190_119025330_119025966_119026081_119026602_119026689_119026936_119027096_119027627_119027873_119028193_119028427_119029221_119029565_119030169
transcript_40126.nic	chr11	-	2681	9	ISM	ENSG00000137700.18	ENST00000525102.5	2844	10	34	242	0	0	intron_retention	FALSE	canonical	3	61	junction_8	96.9638302409718	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTGTCAGTGATTCATT	-119027101	True	NA	-2	True	ATTAAA	-17	NA	119030872	119024355	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_119025077_119025190_119025330_119025966_119026081_119026602_119026689_119026936_119027096_119027627_119027873_119028193_119028427_119029221_119029565_119030231
transcript_40128.known	chr11	-	2040	9	FSM	ENSG00000137700.18	ENST00000527992.5	2040	9	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_8	89.9277487764483	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTATAGAAGATTAAAACTA	-119027109	True	NA	-34	True	AAGAAA	-10	NA	119030880	119024387	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119025077_119025190_119025330_119025966_119026081_119026602_119026689_119026936_119027096_119027627_119027873_119028193_119028427_119029221_119029565_119030848
transcript_40140.known	chr11	+	583	5	FSM	ENSG00000196655.12	ENST00000528230.5	583	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	349.15997408065	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCTGAGAGTTCCTGCA	119014241	True	NA	NA	False	NA	NA	NA	119018765	119023421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119018971_119019142_119019189_119020149_119020254_119021759_119021887_119023320
transcript_40141.known	chr11	+	794	5	FSM	ENSG00000196655.12	ENST00000434101.6	794	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	353.884161838305	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGCAATCTGTCTTAAT	119014241	True	NA	23	True	AATAAA	-18	NA	119018765	119023665	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119018971_119019142_119019211_119020204_119020254_119021759_119021887_119023320
transcript_40142.known	chr11	+	1425	5	FSM	ENSG00000196655.12	ENST00000533632.6	1425	5	0	0	0	0	multi-exon	FALSE	canonical	3	724	junction_2	58.489315263559	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTCCACAACCCAATAGCT	119014241	True	NA	NA	False	AGTAAA	-39	NA	119018765	119024134	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119018971_119019142_119019318_119020149_119020254_119021759_119021887_119023320
transcript_40143.known	chr11	+	768	5	FSM	ENSG00000196655.12	ENST00000525079.5	768	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	350.448284344495	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGGCTGAACCTGTTATG	119014265	True	NA	NA	False	NA	NA	NA	119018789	119023394	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119018971_119019142_119019425_119020149_119020254_119021759_119021887_119023320
transcript_40145.known	chr11	+	817	4	FSM	ENSG00000196655.12	ENST00000533012.1	817	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	386.855126486504	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTGTTTGCAATCTGT	119014270	True	NA	17	True	AATAAA	-12	NA	119018794	119023659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119018971_119019142_119019318_119021759_119021887_119023320
transcript_40147.known	chr11	+	654	3	FSM	ENSG00000196655.12	ENST00000525303.5	654	3	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	431	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATATTCCTTTGATCT	119014241	True	NA	0	True	CATAAA	-7	NA	119018765	119023642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119018971_119021759_119021887_119023320
transcript_40154.known	chr11	-	4598	26	FSM	ENSG00000149428.20	ENST00000617285.5	4598	26	0	0	0	0	multi-exon	FALSE	canonical	3	534	junction_25	142.060347739966	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGCTGTGAGTTTT	-119030863	True	NA	-5	True	AATAAA	-16	NA	119057205	119044187	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119045655_119045780_119045832_119046416_119046468_119046561_119046803_119047733_119047819_119047946_119048081_119048247_119048371_119048475_119048564_119048713_119048887_119049017_119049204_119049555_119049636_119049776_119049838_119051034_119051174_119051437_119051626_119051818_119051952_119052089_119052173_119052294_119052430_119052636_119052830_119054120_119054237_119054493_119054676_119054983_119055061_119055184_119055340_119055492_119055572_119055749_119055844_119056069_119056168_119057019
transcript_40155.nic	chr11	-	4540	26	NIC	ENSG00000149428.20	novel	4598	26	NA	NA	0	0	intron_retention	FALSE	canonical	3	41	junction_25	223.149836656897	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGCTGTGAGTTTT	-119030860	True	NA	-5	True	AATAAA	-16	NA	119057202	119044187	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_119045655_119045780_119045832_119046416_119046468_119046561_119046803_119047733_119047819_119047946_119048081_119048247_119048371_119048475_119048564_119048713_119048887_119049017_119049204_119049555_119049636_119049776_119049838_119051034_119051174_119051437_119051626_119051818_119051952_119052089_119052173_119052294_119052430_119052636_119052830_119054120_119054237_119054493_119054676_119054983_119055061_119055184_119055340_119055492_119055572_119055749_119055844_119056069_119056168_119057074
transcript_40156.known	chr11	-	4367	26	FSM	ENSG00000149428.20	ENST00000652093.1	4367	26	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_2	227.426070625159	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTTCTGTATGTTTGAA	-119030885	True	NA	66	True	NA	NA	NA	119057227	119044310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119045655_119045780_119045835_119046416_119046468_119046561_119046803_119047733_119047819_119047946_119048081_119048247_119048371_119048475_119048564_119048713_119048887_119049017_119049204_119049555_119049636_119049776_119049838_119051034_119051174_119051437_119051626_119051818_119051952_119052089_119052173_119052294_119052430_119052636_119052830_119054120_119054237_119054493_119054676_119054983_119055061_119055184_119055340_119055492_119055572_119055749_119055844_119056069_119056168_119057152
transcript_40170.known	chr11	-	4360	25	FSM	ENSG00000149428.20	ENST00000612687.4	4360	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	253.77622675083	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTTTTTGTGCTGTGAG	-119030815	True	NA	-9	True	AATAAA	-12	NA	119057157	119044191	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119045655_119045780_119045832_119046416_119046468_119046561_119046803_119047733_119047819_119047946_119048081_119048247_119048371_119048475_119048564_119048713_119048887_119049555_119049636_119049776_119049838_119051034_119051174_119051437_119051626_119051818_119051952_119052089_119052173_119052294_119052430_119052636_119052830_119054120_119054237_119054493_119054676_119054983_119055061_119055184_119055340_119055492_119055572_119055749_119055844_119056069_119056168_119057019
transcript_40193.known	chr11	-	3057	18	FSM	ENSG00000149428.20	ENST00000614711.4	3057	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	282.162546100905	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTTTTGTGCTGTGAGT	-119030770	True	NA	-8	True	AATAAA	-13	NA	119057112	119044190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119045156_119049017_119049204_119049555_119049636_119049776_119049838_119051034_119051174_119051437_119051626_119051818_119051952_119052089_119052173_119052294_119052430_119052636_119052830_119054120_119054237_119054493_119054676_119054983_119055061_119055184_119055340_119055492_119055572_119055749_119055844_119056069_119056168_119057019
transcript_40198.known	chr11	-	2023	17	FSM	ENSG00000149428.20	ENST00000530473.5	2023	17	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_16	264.645163379193	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGACAAGTCTGAGGCCC	-119030508	False	NA	NA	False	AAAAAG	-5	NA	119056850	119049039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119049204_119049555_119049636_119049776_119049838_119051034_119051174_119051437_119051626_119051818_119051952_119052089_119052173_119052294_119052430_119052636_119052830_119054120_119054237_119054493_119054676_119054983_119055061_119055184_119055340_119055492_119055572_119055749_119055844_119056069_119056168_119056804
transcript_40219.known	chr11	+	3181	16	FSM	ENSG00000160695.16	ENST00000621676.5	3181	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	24.5416652518392	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTAAGGATTTTTTTCTGG	119066919	True	NA	19	True	AATAAA	-20	NA	119067817	119081972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119068011_119069195_119069345_119069441_119069578_119070233_119070398_119071595_119071844_119073197_119073400_119073799_119073952_119076896_119077084_119077500_119077648_119077877_119078067_119078172_119078335_119078564_119078705_119078794_119078998_119079128_119079301_119081091_119081315_119081458
transcript_40227.nnic	chr11	+	1459	15	NNC	ENSG00000256269.11	novel	1505	14	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	170.114967127576	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTGTGTGCGCGTGTGG	119081887	True	NA	18	True	AATAAA	-14	NA	119084851	119093546	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_119085067_119088254_119088309_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092124_119092164_119092403_119092524_119092757_119092812_119092934_119093022_119093109_119093274_119093345
transcript_40228.known	chr11	+	1448	14	FSM	ENSG00000256269.11	ENST00000442944.7	1448	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	174.992138454018	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACCAATCCTACTAATAA	119081918	True	NA	-16	True	GGGGCT	-39	NA	119084882	119093512	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119085067_119088254_119088309_119088634_119088708_119089099_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092124_119092164_119092403_119092524_119092757_119092812_119092934_119093022_119093109
transcript_40234.known	chr11	+	1559	14	FSM	ENSG00000256269.11	ENST00000537841.5	1559	14	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	175.09665969597	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAATCCTACTAATAAACCA	119081920	True	NA	-12	True	GGGGCT	-43	NA	119084884	119093516	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119085158_119088254_119088309_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092124_119092164_119092403_119092524_119092757_119092812_119092934_119093022_119093109
transcript_40236.known	chr11	+	1351	13	FSM	ENSG00000256269.11	ENST00000544387.5	1351	13	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_10	178.158227894944	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTGCGCGTGTGGAG	119081949	True	NA	20	True	AATAAA	-16	NA	119084913	119093548	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119085067_119088254_119088309_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092124_119092164_119092757_119092812_119092934_119093022_119093109
transcript_4024.known	chr1	+	3767	15	FSM	ENSG00000142794.19	ENST00000318249.10	3767	15	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	23.9336881522976	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGACTGTTGGATTGTT	21438280	True	NA	NA	False	ATTAAA	-16	NA	21440136	21484900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_21440349_21444947_21445220_21468687_21468898_21470631_21470735_21471568_21471784_21472842_21472916_21473379_21473586_21474899_21474952_21478143_21478308_21479348_21479401_21480050_21480224_21480929_21480982_21481596_21481770_21482483_21482536_21483142
transcript_40242.nic	chr11	+	1450	13	NIC	ENSG00000256269.11	novel	1505	14	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	176.134950629718	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTGTGTGCGCGTGTGG	119081914	True	NA	18	True	AATAAA	-14	NA	119084878	119093546	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_119085067_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092124_119092164_119092403_119092524_119092757_119092812_119092934_119093022_119093109
transcript_40248.nic	chr11	+	998	9	ISM	ENSG00000256269.11	ENST00000652429.1	1505	14	-29	1819	-14	89	5prime_fragment	FALSE	canonical	3	550	junction_1	59.7483001850262	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCTTGGTGTCAGATGAT	119081887	True	NA	6	True	NA	NA	NA	119084851	119091730	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_119085067_119088254_119088309_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412
transcript_40253.known	chr11	+	562	7	FSM	ENSG00000256269.11	ENST00000543821.5	562	7	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_6	241.460141638325	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACCCTGCCAGAGAAGA	119081923	True	NA	NA	False	NA	NA	NA	119084887	119090046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119085067_119088254_119088309_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089776_119089989
transcript_40254.known	chr11	-	1373	2	FSM	ENSG00000188486.4	ENST00000375167.1	1373	2	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAATGGAGCGTTTGTTTT	-119082312	True	NA	-28	True	ATTAAA	-15	NA	119095449	119093878	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119094262_119094459
transcript_40255.known	chr11	-	1614	1	FSM	ENSG00000188486.4	ENST00000530167.2	1592	1	-2	-20	-2	20	mono-exon	FALSE	NA	NA	NA	NA	NA	488	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAGAGAGTTGTAGAATT	-119082330	True	NA	-3	True	ATTAAA	-40	NA	119095467	119093853	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119093900_119095500
transcript_40258.known	chr11	+	4771	14	FSM	ENSG00000172375.14	ENST00000336702.7	4771	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_11	4.1595402567987	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTGCATTTTCTTTATC	119107244	True	NA	NA	False	ATTAAA	-17	NA	119107382	119118544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119108096_119110103_119110200_119110560_119110681_119110846_119110958_119111051_119111169_119111262_119111375_119111520_119111630_119112327_119112393_119112481_119112610_119112699_119112875_119113610_119113713_119113851_119113989_119114079_119114366_119116044
transcript_40266.known	chr11	-	1719	9	FSM	ENSG00000172269.20	ENST00000639704.1	1719	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	151.629018907991	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAATTAAGTGTTCTGAT	-119096469	True	NA	-96	True	NA	NA	NA	119101837	119096594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119097064_119097141_119097298_119097463_119097552_119097854_119098044_119098402_119098488_119100261_119100409_119100629_119100751_119101017_119101139_119101494
transcript_40268.known	chr11	-	1788	9	FSM	ENSG00000172269.20	ENST00000683143.1	1788	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	151.950187150263	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTTCTTATTGTTTA	-119096464	True	NA	-24	True	AATAAA	-5	NA	119101832	119096522	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119097064_119097141_119097298_119097463_119097552_119097854_119098044_119098402_119098488_119100261_119100409_119100629_119100844_119101017_119101048_119101494
transcript_40270.known	chr11	-	1813	9	FSM	ENSG00000172269.20	ENST00000640747.1	1813	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_7	146.283756787963	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTAAATTAAGTGTTCTG	-119096488	True	NA	-98	True	NA	NA	NA	119101856	119096596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119097064_119097141_119097298_119097463_119097552_119097854_119098044_119098402_119098488_119100261_119100409_119100629_119100828_119101017_119101139_119101494
transcript_40276.known	chr11	-	2207	8	FSM	ENSG00000172269.20	ENST00000683373.1	2207	8	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_7	49.3550237295753	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTTCTTATTGTTTA	-119096489	True	NA	-24	True	AATAAA	-5	NA	119101857	119096522	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119097064_119097141_119097298_119097463_119098044_119098402_119098488_119100261_119100409_119100629_119100844_119101017_119101139_119101494
transcript_40277.known	chr11	-	1811	8	FSM	ENSG00000172269.20	ENST00000682326.1	1811	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	160.58464612605	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTGTCTTTTTCTTATT	-119096489	True	NA	-29	True	NA	NA	NA	119101857	119096527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119097064_119097141_119097298_119097854_119098044_119098402_119098488_119100261_119100409_119100629_119100844_119101017_119101139_119101494
transcript_40286.known	chr11	-	1791	8	FSM	ENSG00000172269.20	ENST00000682791.1	1791	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	162.19539740318	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTTCTTATTGTTTA	-119096463	True	NA	-24	True	AATAAA	-5	NA	119101831	119096522	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119097064_119097141_119097298_119097463_119097552_119097854_119098044_119098402_119098488_119100261_119100409_119100629_119100878_119101494
transcript_40287.known	chr11	-	1817	8	FSM	ENSG00000172269.20	ENST00000392834.7	1817	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	160.141773922678	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATGTAGGTATATTT	-119096510	True	NA	-11	True	AATAAA	-18	NA	119101878	119096509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119097064_119097141_119097298_119097463_119097552_119097854_119098044_119098402_119098488_119100261_119100409_119100629_119100844_119101494
transcript_40288.known	chr11	-	2612	5	FSM	ENSG00000172269.20	ENST00000682665.1	2612	5	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_4	51.7222147630977	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCACATGCTCTCAATGG	-119096510	True	NA	-58	True	NA	NA	NA	119101878	119096556	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119098044_119098402_119098488_119100261_119100409_119100629_119101139_119101494
transcript_40289.known	chr11	-	2508	6	FSM	ENSG00000172269.20	ENST00000684315.1	2508	6	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_2	28.4211189083048	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTGTCTTTTTCTTATT	-119096490	True	NA	-29	True	NA	NA	NA	119101858	119096527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119097298_119097463_119097552_119097854_119098044_119098402_119098488_119100261_119100409_119100629
transcript_40302.nic	chr11	+	2250	11	NIC	ENSG00000172273.13	novel	3185	10	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	55.9293304090081	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTCTTCTTACATTT	119118544	True	NA	28	True	AATAAA	-19	NA	119121564	119135054	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_119121640_119126934_119127126_119130724_119130955_119131534_119131647_119131829_119131983_119132242_119132298_119132495_119132574_119132660_119132782_119132863_119133003_119133094_119133220_119134083
transcript_40305.nnic	chr11	+	2305	11	NNC	ENSG00000172273.13	novel	3185	10	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	58.2945108908206	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTCTTCTTACATTT	119118551	True	NA	28	True	AATAAA	-19	NA	119121571	119135054	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_119121640_119123567_119123685_119126934_119127126_119130724_119130955_119131534_119131647_119131829_119131983_119132495_119132574_119132660_119132782_119132863_119133003_119133094_119133220_119134083
transcript_40318.known	chr11	+	3185	10	FSM	ENSG00000172273.13	ENST00000350777.7	3185	10	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	23.0929415756695	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTGTCTATTTGTGG	119118559	True	NA	NA	False	AATAAA	-28	NA	119121579	119136059	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119121640_119126934_119127126_119130724_119130955_119131534_119131647_119131829_119131983_119132495_119132574_119132660_119132782_119132863_119133003_119133094_119133220_119134083
transcript_4032.known	chr1	+	2133	14	FSM	ENSG00000142794.19	ENST00000454000.6	2133	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	26.0427504705437	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTGGAAGCCCAGTCATA	21438271	True	NA	NA	False	AATGAA	-11	NA	21440127	21483467	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_21440349_21444947_21445220_21470631_21470735_21471568_21471784_21472842_21472916_21473379_21473586_21474899_21474952_21478143_21478308_21479348_21479401_21480050_21480224_21480929_21480982_21481596_21481770_21482483_21482536_21483142
transcript_40340.known	chr11	+	3812	15	FSM	ENSG00000172350.10	ENST00000619701.5	3812	15	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_12	3.38966014791562	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAATGTGTAAATGTGTGT	119149027	True	NA	9	True	AATAAA	-19	NA	119149051	119162653	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119149364_119149953_119150204_119154025_119154144_119154259_119154393_119154524_119154576_119154769_119154916_119156328_119156453_119156563_119156679_119156871_119157015_119158233_119158333_119158556_119158726_119158828_119158930_119160226_119160386_119160537_119160657_119160880
transcript_40348.known	chr11	+	3716	10	FSM	ENSG00000160703.16	ENST00000409991.5	3716	10	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	21.3853532431273	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAATTGTGGCCTCTTCTTT	119167512	True	NA	16	True	ATTAAA	-18	NA	119168727	119184012	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119168895_119171355_119171474_119172355_119172426_119172900_119172990_119173478_119174099_119174452_119175275_119179692_119180289_119181170_119181258_119182093_119182346_119183117
transcript_40349.nic	chr11	+	3036	10	NIC	ENSG00000160703.16	novel	2850	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_9	28.7715565991102	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGCCTCTTCTTTACTG	119167493	True	NA	20	True	ATTAAA	-22	NA	119168708	119184016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_119168895_119171355_119171474_119172355_119172426_119172900_119172990_119173478_119174099_119174452_119175275_119179692_119180289_119181170_119181258_119182093_119182346_119183820
transcript_40350.nic	chr11	+	3887	10	NIC	ENSG00000160703.16	novel	4131	10	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	17.220430014275	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGCCTCTTCTTTACTG	119167493	True	NA	20	True	ATTAAA	-22	NA	119168708	119184016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_119169043_119171355_119171474_119172355_119172426_119172900_119172990_119173478_119174099_119174452_119175275_119179692_119180289_119181170_119181258_119182093_119182346_119183117
transcript_40351.nic	chr11	+	3184	10	NIC	ENSG00000160703.16	novel	2850	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_9	26.296504954832	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGCCTCTTCTTTACTG	119167493	True	NA	20	True	ATTAAA	-22	NA	119168708	119184016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_119169043_119171355_119171474_119172355_119172426_119172900_119172990_119173478_119174099_119174452_119175275_119179692_119180289_119181170_119181258_119182093_119182346_119183820
transcript_40352.known	chr11	+	4131	10	FSM	ENSG00000160703.16	ENST00000409109.6	4131	10	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	20.8439232344218	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGCCTCTTCTTTACTG	119167509	True	NA	20	True	ATTAAA	-22	NA	119168724	119184016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119169303_119171355_119171474_119172355_119172426_119172900_119172990_119173478_119174099_119174452_119175275_119179692_119180289_119181170_119181258_119182093_119182346_119183117
transcript_40353.nic	chr11	+	3444	10	NIC	ENSG00000160703.16	novel	4131	10	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_9	28.4253408071038	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGCCTCTTCTTTACTG	119167493	True	NA	20	True	ATTAAA	-22	NA	119168708	119184016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_119169303_119171355_119171474_119172355_119172426_119172900_119172990_119173478_119174099_119174452_119175275_119179692_119180289_119181170_119181258_119182093_119182346_119183820
transcript_40354.known	chr11	+	3744	10	FSM	ENSG00000160703.16	ENST00000292199.6	3744	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	23.8746727726266	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTGGCCTCTTCTTTAC	119167513	True	NA	18	True	ATTAAA	-20	NA	119168728	119184014	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119168922_119171355_119171474_119172355_119172426_119172900_119172990_119173478_119174099_119174452_119175275_119179692_119180289_119181170_119181258_119182093_119182346_119183117
transcript_40359.nic	chr11	+	3669	9	NIC	ENSG00000160703.16	novel	4131	10	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	30.2974833938398	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGCCTCTTCTTTACTG	119167493	True	NA	20	True	ATTAAA	-22	NA	119168708	119184016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_119168895_119171355_119171474_119172900_119172990_119173478_119174099_119174452_119175275_119179692_119180289_119181170_119181258_119182093_119182346_119183117
transcript_40363.nic	chr11	+	3817	9	NIC	ENSG00000160703.16	novel	4131	10	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	27.6575035026663	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGCCTCTTCTTTACTG	119167493	True	NA	20	True	ATTAAA	-22	NA	119168708	119184016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_119169043_119171355_119171474_119172900_119172990_119173478_119174099_119174452_119175275_119179692_119180289_119181170_119181258_119182093_119182346_119183117
transcript_40367.nic	chr11	+	4077	9	NIC	ENSG00000160703.16	novel	4131	10	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	29.9290828459544	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGCCTCTTCTTTACTG	119167493	True	NA	20	True	ATTAAA	-22	NA	119168708	119184016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_119169303_119171355_119171474_119172900_119172990_119173478_119174099_119174452_119175275_119179692_119180289_119181170_119181258_119182093_119182346_119183117
transcript_4037.nnic	chr1	+	1245	4	NNC	ENSG00000142794.19	novel	933	6	NA	NA	-9	-2148	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_2	44.312024954357	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAATATGTCCAAATACAT	21438262	True	NA	NA	False	NA	NA	NA	21440118	21466746	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_21440349_21444947_21445220_21465734_21465818_21466086
transcript_40371.nic	chr11	+	3689	9	NIC	ENSG00000160703.16	novel	4131	10	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	32.0719406179296	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGCCTCTTCTTTACTG	119167500	True	NA	20	True	ATTAAA	-22	NA	119168715	119184016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_119168922_119171355_119171474_119172900_119172990_119173478_119174099_119174452_119175275_119179692_119180289_119181170_119181258_119182093_119182346_119183117
transcript_40386.known	chr11	+	11168	16	FSM	ENSG00000110395.7	ENST00000264033.6	11168	16	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_8	30.3307691223872	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGTTCTTGCTCATTCA	119202873	True	NA	16	True	AATAAA	-21	NA	119206338	119308149	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119206613_119232447_119232696_119271734_119271882_119273867_119274025_119274831_119274954_119275996_119276135_119277756_119277845_119278165_119278298_119278509_119278714_119284968_119285101_119285188_119285567_119287851_119287947_119296917_119297035_119297383_119297482_119298357_119298541_119299494
transcript_40392.nic	chr11	+	459	2	ISM	ENSG00000110395.7	ENST00000634840.1	4813	15	-6	69300	-4	-69300	5prime_fragment	FALSE	canonical	3	145	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTATTTTAGGGTGTTTA	119202828	True	NA	NA	False	NA	NA	NA	119206293	119232587	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_119206613_119232447
transcript_40394.known	chr11	-	3327	16	FSM	ENSG00000076706.17	ENST00000264036.6	3327	16	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_15	5.11033810579648	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATACATTGCTTTTTATTC	-119316224	True	NA	-4	True	AATAAA	-19	NA	119317130	119308528	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119309916_119310348_119310467_119310755_119310904_119311089_119311186_119311279_119311422_119311529_119311652_119311807_119311950_119312051_119312171_119312265_119312429_119312526_119312649_119312769_119312950_119314488_119314577_119314678_119314750_119314832_119315041_119315138_119315264_119317034
transcript_4040.known	chr1	+	1417	3	FSM	ENSG00000142794.19	ENST00000478653.6	1417	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	47	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGTCTATCTTTTACTGA	21438281	True	NA	NA	False	AATAAA	-14	NA	21440137	21454306	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_21440349_21444947_21445220_21453372
transcript_40402.known	chr11	+	2783	1	FSM	ENSG00000173456.5	ENST00000311413.5	2783	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2064	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGTCTCTGTGTGCATC	119324405	True	NA	14	True	AATAAA	-17	NA	119334526	119337309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119334500_119337300
transcript_40403.known	chr11	-	1353	3	FSM	ENSG00000223953.6	ENST00000528368.3	1353	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCGGCTCCAGCCTTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	119340883	119338941	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119339849_119340183_119340441_119340694
transcript_40405.known	chr11	+	3844	3	FSM	ENSG00000245248.8	ENST00000660630.1	3844	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	12	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCATGGAGTGTGCACCTA	119381462	True	NA	NA	False	NA	NA	NA	119381809	119413071	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119381909_119394980_119395155_119409500
transcript_40407.known	chr11	+	555	3	FSM	ENSG00000245248.8	ENST00000656105.1	555	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	17	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTATGTCTCATACTTC	119381462	True	NA	3	True	TTTAAA	-7	NA	119381809	119409765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_119381909_119394980_119395155_119409483
transcript_40408.known	chr11	-	3697	13	FSM	ENSG00000036672.16	ENST00000260187.7	3697	13	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_11	6.35249294896631	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGCAGATGTTGGAATCT	-119381109	True	NA	0	True	AATAAA	-20	NA	119381690	119355214	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119356923_119357186_119357308_119357482_119357591_119357756_119357836_119357980_119358062_119358148_119358253_119358772_119358838_119359023_119359135_119359230_119359343_119359536_119359661_119360183_119360235_119372706_119373522_119381472
transcript_40411.known	chr11	-	1704	12	FSM	ENSG00000036672.16	ENST00000525735.1	1704	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_11	6.16977436398442	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGAAGACCCTCGCTGCG	-119363963	True	NA	NA	False	NA	NA	NA	119364207	119356533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119356923_119357186_119357308_119357482_119357591_119357756_119357836_119357980_119358062_119358148_119358253_119358772_119358838_119359023_119359135_119359230_119359343_119359536_119359661_119360183_119360235_119363848
transcript_40412.known	chr11	-	2903	12	FSM	ENSG00000036672.16	ENST00000455332.6	2903	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_11	9.0261328585483	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGCAGATGTTGGAATCT	-119381130	True	NA	0	True	AATAAA	-20	NA	119381711	119355214	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119356923_119357186_119357308_119357482_119357591_119357756_119357836_119357980_119358062_119358148_119358253_119358772_119358838_119359023_119359135_119359230_119359343_119359536_119359661_119360183_119360235_119381472
transcript_40415.nic	chr11	-	2054	2	ISM	ENSG00000036672.16	ENST00000260187.7	3697	13	9	16462	9	1301	5prime_fragment	FALSE	canonical	3	19	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGCATGCCACAGCAAGAAA	-119381100	True	NA	NA	False	AATACA	-13	NA	119381681	119371676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_119373522_119381472
transcript_40420.known	chr11	-	2050	4	FSM	ENSG00000154096.14	ENST00000528522.5	2050	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1160.83715002962	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATAAAAAGGGCA	-119422534	False	NA	-32	True	NA	NA	NA	119422562	119418819	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119419521_119420050_119420387_119420868_119420930_119421610
transcript_40421.nnic	chr11	-	2374	9	NNC	ENSG00000110400.11	novel	1377	8	NA	NA	1	1036	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	48.9309143078279	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAATATATAAAGAAGAGAG	-119726332	True	NA	NA	False	TATAAA	-18	NA	119729199	119637061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_119637449_119638133_119638248_119638730_119638807_119639864_119640013_119675158_119675311_119677101_119677220_119677554_119677858_119678414_119678766_119728474
transcript_40422.known	chr11	-	5956	6	FSM	ENSG00000110400.11	ENST00000264025.8	5956	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	28.8069436074013	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTTGCATCCCATCACT	-119726333	True	NA	NA	False	AATAAA	-15	NA	119729200	119660991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119665298_119675158_119675311_119677101_119677220_119677554_119677858_119678414_119678766_119728474
transcript_40425.known	chr11	-	1059	6	FSM	ENSG00000110400.11	ENST00000340882.2	1059	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	31.9023510105447	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAGACTTCACCTGGGAC	-119728083	False	NA	NA	False	NA	NA	NA	119728553	119674591	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_119674648_119675158_119675311_119677101_119677220_119677554_119677858_119678414_119678766_119728474
transcript_40426.nic	chr11	-	2590	5	ISM	ENSG00000110400.11	ENST00000264025.8	5956	6	-173	13400	-173	-10	5prime_fragment	FALSE	canonical	3	77	junction_4	17.2970373185699	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCTGACCTCCATCATC	-119728903	False	NA	-8	True	AATAAA	-21	NA	119729373	119674391	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_119675311_119677101_119677220_119677554_119677858_119678414_119678766_119728474
transcript_40428.nic	chr11	-	1997	4	ISM	ENSG00000110400.11	ENST00000340882.2	1059	6	-859	2223	-212	0	5prime_fragment	FALSE	canonical	3	77	junction_3	16.9901932498329	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTGATTCAGTCTGAG	-119728751	True	NA	-2	True	AATAAA	-17	NA	119729412	119676814	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_119677220_119677554_119677858_119678414_119678766_119728474
transcript_40430.known	chr11	-	2977	9	FSM	ENSG00000137699.17	ENST00000341846.10	2977	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.707106781186548	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTCTTGTATTGAATGAC	NA	False	NA	NA	False	AATAAA	-15	NA	120138113	120111285	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_120112477_120115337_120115415_120118222_120118322_120120572_120120666_120122953_120123056_120125690_120125890_120127335_120127570_120128399_120128496_120137227
transcript_40432.known	chr11	+	2262	4	FSM	ENSG00000184232.9	ENST00000328965.9	2262	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	6.97614984548545	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCGAAGTGAATTCTTGCA	120210805	True	NA	NA	False	TATAAA	-17	NA	120211031	120230334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_120211511_120225660_120225796_120226815_120226997_120228867
transcript_40433.nic	chr11	+	613	4	NIC	ENSG00000181264.9	novel	3930	4	NA	NA	-35	-180	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	10.2089285540757	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTTGGTCAGTCTTCAA	120324175	True	NA	9	True	AATAAA	-17	NA	120325260	120330638	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_120325369_120327440_120327641_120329976_120330050_120330406
transcript_40435.known	chr11	+	3930	4	FSM	ENSG00000181264.9	ENST00000529187.1	3930	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	13.4742552876052	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGAGTCTGTCTTTATAT	120324221	True	NA	NA	False	AGTAAA	-16	NA	120325306	120333682	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_120325369_120327121_120327641_120329976_120330050_120330406
transcript_40436.known	chr11	+	3980	3	FSM	ENSG00000181264.9	ENST00000375095.3	3980	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	10	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTGTCTTTATATTTAT	120324213	True	NA	NA	False	AGTAAA	-20	NA	120325298	120333686	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_120325369_120327440_120327641_120329976
transcript_40440.known	chr11	+	1434	3	FSM	ENSG00000181264.9	ENST00000314475.6	1434	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	16	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGATGTTCAGGCAGTT	120324210	True	NA	NA	False	NA	NA	NA	120325295	120330818	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_120325369_120327121_120327641_120329976
transcript_40441.known	chr11	+	3776	2	FSM	ENSG00000181264.9	ENST00000531346.1	3776	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCAGAGTCTGTCTTTA	120324210	True	NA	NA	False	AGTAAA	-13	NA	120325295	120333679	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_120325369_120329976
transcript_40448.nic	chr11	+	2704	19	ISM	ENSG00000196914.9	ENST00000356641.7	6891	40	-682	38700	-181	1094	5prime_fragment	FALSE	canonical	2	23	junction_8	9.11737589495336	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTAATAGCATGTTCAG	NA	False	NA	NA	False	AATGAA	-2	NA	120336231	120448360	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_120337276_120406117_120406142_120407737_120407824_120420752_120420852_120421802_120421853_120424357_120424416_120428068_120428248_120429439_120429518_120429711_120429832_120431770_120431912_120437307_120437383_120440128_120440222_120441706_120441818_120442103_120442203_120445421_120445465_120446402_120446509_120446947_120447086_120447873_120447907_120448233
transcript_40459.nic	chr11	+	2619	6	ISM	ENSG00000196914.9	ENST00000356641.7	6891	40	-578	61283	-77	13940	5prime_fragment	FALSE	canonical	2	37	junction_3	7.92464510246358	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGAGACTGCTTGAACTG	120334628	True	NA	NA	False	NA	NA	NA	120336335	120425777	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_120337276_120406117_120406142_120407737_120407824_120420752_120420852_120421802_120421853_120424357
transcript_40469.known	chr11	+	3593	21	FSM	ENSG00000149403.13	ENST00000638419.1	3593	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.49799919935936	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGTTTTTCTTTTCTGGA	120511620	True	NA	NA	False	ATTAAA	-4	NA	120511745	120986685	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_120511888_120653687_120653793_120660268_120660401_120802692_120802858_120815377_120815476_120819754_120819921_120831851_120832031_120836790_120836845_120861958_120862121_120874065_120874219_120875138_120875244_120898531_120898640_120905289_120905494_120940346_120940461_120952854_120952965_120956779_120956954_120960908_120961075_120962455_120962682_120967194_120967324_120982105_120982225_120985903
transcript_40471.known	chr11	+	5270	9	FSM	ENSG00000154114.13	ENST00000683345.1	5270	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	20.6998641299889	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTGTTCTGATTTTTT	121023262	True	NA	NA	False	ATTAAA	-17	NA	121024101	121090776	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_121024292_121036504_121036613_121045673_121045824_121047527_121047668_121053550_121053733_121055051_121055309_121058344_121058472_121059968_121060086_121086777
transcript_40474.known	chr11	+	5142	8	FSM	ENSG00000154114.13	ENST00000422003.6	5142	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	10.3430939199417	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTGTGTTCTGATTTTT	121023281	True	NA	NA	False	ATTAAA	-16	NA	121024120	121090775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_121024292_121045673_121045824_121047527_121047668_121053550_121053733_121055051_121055309_121058344_121058472_121059968_121060086_121086777
transcript_40479.known	chr11	+	589	5	FSM	ENSG00000109929.10	ENST00000527762.5	589	5	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	299.737697829285	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGCTTTCTTCAGAGTC	121292492	False	NA	NA	False	NA	NA	NA	121292770	121307124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_121292817_121303365_121303586_121304339_121304494_121306385_121306487_121307056
transcript_40480.known	chr11	+	6854	5	FSM	ENSG00000109929.10	ENST00000264027.9	6854	5	0	0	0	0	multi-exon	FALSE	canonical	3	576	junction_1	94.2745326161843	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTGTGGCTATATGT	121292492	False	NA	20	True	AATAAA	-25	NA	121292770	121313410	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_121292817_121303365_121303586_121304360_121304494_121306385_121306487_121307056
transcript_40481.known	chr11	+	2258	5	FSM	ENSG00000109929.10	ENST00000392789.2	2258	5	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	292.566659071057	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATCAGTTGAGTATTAT	121289797	False	NA	NA	False	AATAAA	-18	NA	121292851	121308633	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_121293079_121303365_121303586_121304360_121304494_121306385_121306487_121307056
transcript_40483.known	chr11	+	10863	48	FSM	ENSG00000137642.13	ENST00000260197.12	10863	48	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_15	33.0280345135733	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATTGGTCTGTTTTAAA	121445894	True	NA	16	True	AATAAA	-28	NA	121452313	121633763	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_121452617_121470006_121470124_121478117_121478244_121488031_121488194_121490042_121490111_121496868_121497050_121513002_121513105_121514151_121514322_121520656_121520850_121522585_121522704_121522915_121522990_121532463_121532553_121543547_121543727_121545242_121545430_121549959_121550089_121550584_121550671_121553936_121554110_121555186_121555319_121557313_121557406_121558590_121558838_121559518_121559658_121566939_121567114_121570156_121570271_121574240_121574364_121577280_121577401_121583457_121583584_121586221_121586330_121588019_121588152_121589258_121589391_121590039_121590175_121591000_121591157_121595622_121595773_121604192_121604325_121605112_121605240_121605401_121605572_121606844_121606958_121607185_121607291_121608103_121608177_121611075_121611159_121612735_121612833_121614870_121615056_121618773_121618894_121619752_121619918_121621063_121621239_121622161_121622269_121625084_121625278_121627554_121627768_121629495
transcript_40487.nic	chr11	+	3637	23	ISM	ENSG00000137642.13	ENST00000260197.12	10863	48	-2	63213	-2	11713	5prime_fragment	TRUE	canonical	3	131	junction_15	12.0238227718803	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTGGCAATCTGGGCT	121445892	True	NA	NA	False	AATAAA	-22	NA	121452311	121570550	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_121452617_121470006_121470124_121478117_121478244_121488031_121488194_121490042_121490111_121496868_121497050_121513002_121513105_121514151_121514322_121520656_121520850_121522585_121522704_121522915_121522990_121532463_121532553_121543547_121543727_121545242_121545430_121549959_121550089_121550584_121550671_121553936_121554110_121555186_121555319_121557313_121557406_121558590_121558838_121559518_121559658_121566939_121567114_121570156
transcript_40491.nic	chr11	+	4094	14	ISM	ENSG00000137642.13	ENST00000532451.1	2165	15	-75	-421	-9	421	intron_retention	FALSE	canonical	3	140	junction_7	11.2239178258283	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCACACACACAAGAAAAGAA	121445885	True	NA	NA	False	NA	NA	NA	121452304	121547445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_121452617_121470006_121470124_121478117_121478244_121488031_121488194_121490042_121490111_121496868_121497050_121513002_121513105_121514151_121514322_121520656_121520850_121522585_121522704_121522915_121522990_121532463_121532553_121543547_121543727_121545242
transcript_40493.known	chr11	+	6865	14	FSM	ENSG00000154127.10	ENST00000284273.6	6865	14	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	5.46965810296344	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGAGCAATGTCATTTTA	122655095	True	NA	NA	False	AATAAA	-19	NA	122655721	122814473	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_122656211_122776218_122776273_122777023_122777211_122779496_122779696_122783052_122783223_122789099_122789309_122794701_122794835_122796155_122796277_122796910_122797034_122798941_122799035_122801187_122801333_122806409_122806517_122808066_122808177_122809748
transcript_40498.known	chr11	+	1964	4	FSM	ENSG00000109944.11	ENST00000307257.10	1964	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	6.79869268479038	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGATGTCTGGTGAAATT	122882661	True	NA	NA	False	AATAAA	-19	NA	122882682	122905892	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_122882973_122885760_122886194_122903924_122904445_122905171
transcript_40508.known	chr11	-	5032	7	FSM	ENSG00000166250.12	ENST00000448775.4	5032	7	0	0	0	0	multi-exon	TRUE	canonical	3	64	junction_5	3.13138237134266	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGTAGGAGAAGCTGAAG	-123194162	True	NA	-27	True	AATAAA	-14	NA	123195248	123069871	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_123073775_123074701_123074844_123083084_123083208_123083679_123083848_123084511_123084714_123097794_123097953_123194912
transcript_40537.known	chr11	-	2264	9	FSM	ENSG00000109971.14	ENST00000534624.6	2264	9	0	0	0	0	multi-exon	FALSE	canonical	3	7852	junction_5	1844.61188329686	12044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTTTGAGTCTTTAAATA	-123007290	True	NA	NA	False	AATAAA	-26	NA	123062136	123057488	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_123057920_123058251_123058485_123058631_123058831_123059058_123059262_123059472_123060029_123060115_123060269_123060592_123060799_123061119_123061330_123062063
transcript_40545.known	chr11	-	2004	8	FSM	ENSG00000109971.14	ENST00000453788.6	2004	8	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_1	2734.02110975234	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTTTGAGTCTTTAAATA	-123062324	False	NA	NA	False	AATAAA	-26	NA	123062335	123057488	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_123057829_123058766_123058831_123059058_123059262_123059472_123060029_123060115_123060269_123060592_123060799_123061119_123061330_123062063
transcript_4055.known	chr1	+	2536	12	FSM	ENSG00000162551.14	ENST00000374840.8	2536	12	0	0	0	0	multi-exon	FALSE	canonical	3	689	junction_5	55.5584719161074	2792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGCTGAGTCTTTGTGGT	21498924	True	NA	22	True	AATAAA	-23	NA	21509422	21578410	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_21509518_21553977_21554143_21560625_21560746_21561096_21561213_21563109_21563285_21564040_21564217_21568103_21568248_21570304_21570375_21573664_21573800_21575732_21575925_21576521_21576642_21577382
transcript_40582.known	chr11	-	2306	9	FSM	ENSG00000109971.14	ENST00000532636.5	2306	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	3617.8460593805	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTTTGAGTCTTTAAATA	-123061778	False	NA	NA	False	AATAAA	-26	NA	123061789	123057488	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_123057920_123058251_123058485_123058631_123058831_123059058_123059262_123059472_123060029_123060115_123060269_123060592_123060799_123061119_123061330_123061674
transcript_40583.known	chr11	-	2186	8	FSM	ENSG00000109971.14	ENST00000227378.7	2186	8	0	0	0	0	multi-exon	FALSE	canonical	3	7852	junction_5	1931.47485151653	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATACAATTGCTTTGAGTC	-123061321	False	NA	NA	False	AATAAA	-18	NA	123061332	123057496	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_123057920_123058251_123058485_123058631_123058831_123059058_123059262_123059472_123060029_123060115_123060269_123060592_123060799_123061119
transcript_40586.known	chr11	+	1180	2	FSM	ENSG00000023171.20	ENST00000533341.3	1180	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTGAAATTCTTTTATT	123429665	True	NA	11	True	AATAAA	-23	NA	123430268	123435715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_123431167_123435433
transcript_40595.known	chr11	-	4435	9	FSM	ENSG00000166261.11	ENST00000530393.6	4435	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	47.5368278285373	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTGAGGCTGGGCCGGT	-123737790	True	NA	NA	False	AATAAA	-33	NA	123741660	123723913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_123726992_123727475_123727596_123728132_123728263_123729125_123729215_123729614_123729826_123730486_123730986_123740116_123740193_123740416_123740537_123741548
transcript_40596.nic	chr11	-	4107	9	NIC	ENSG00000166261.11	novel	4435	9	NA	NA	-44	-164	combination_of_known_junctions	FALSE	canonical	3	84	junction_7	31.9117435280494	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCCTGGTTTCTGGGACT	-123741639	False	NA	-2	True	AATAAA	-23	NA	123741719	123724340	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_123726992_123727475_123727596_123728132_123728263_123729125_123729215_123729614_123729826_123730486_123730986_123740116_123740233_123740416_123740537_123741548
transcript_40605.nic	chr11	-	3668	9	NIC	ENSG00000166261.11	novel	4435	9	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	3	84	junction_7	31.9117435280494	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTTGTTTGCTTTTTC	-123741639	False	NA	-1	True	AGTAAA	-14	NA	123741719	123724779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_123726992_123727475_123727596_123728132_123728263_123729125_123729215_123729614_123729826_123730486_123730986_123740116_123740233_123740416_123740537_123741548
transcript_40606.nic	chr11	-	3162	9	NIC	ENSG00000166261.11	novel	4435	9	NA	NA	0	-447	combination_of_known_junctions	FALSE	canonical	3	84	junction_7	31.9117435280494	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCCGTTATTCAACCAG	-123737790	True	NA	-14	True	ATTAAA	-17	NA	123741660	123725226	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_123726992_123727475_123727596_123728132_123728263_123729125_123729215_123729614_123729826_123730486_123730986_123740116_123740233_123740416_123740537_123741548
transcript_40607.nic	chr11	-	4291	8	NIC	ENSG00000166261.11	novel	4435	9	NA	NA	-44	-164	intron_retention	FALSE	canonical	3	89	junction_6	30.2836926548981	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCCTGGTTTCTGGGACT	-123741639	False	NA	-2	True	AATAAA	-23	NA	123741719	123724340	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_123726992_123727475_123727596_123728132_123728263_123729125_123729215_123729614_123729826_123730486_123730986_123740116_123740537_123741548
transcript_40608.nnic	chr11	-	3932	8	NIC	ENSG00000166261.11	novel	4435	9	NA	NA	0	-164	combination_of_known_splicesites	FALSE	canonical	3	24	junction_6	46.5477591034308	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCCTGGTTTCTGGGACT	-123737790	True	NA	-2	True	AATAAA	-23	NA	123741660	123724340	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_123726992_123727475_123727596_123728132_123728263_123729125_123729215_123729614_123729826_123730486_123730986_123740416_123740537_123741548
transcript_40613.nic	chr11	-	3852	8	NIC	ENSG00000166261.11	novel	4435	9	NA	NA	-44	0	intron_retention	FALSE	canonical	3	89	junction_6	30.2836926548981	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTTGTTTGCTTTTTC	-123741639	False	NA	-1	True	AGTAAA	-14	NA	123741719	123724779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_123726992_123727475_123727596_123728132_123728263_123729125_123729215_123729614_123729826_123730486_123730986_123740116_123740537_123741548
transcript_40614.known	chr11	-	4130	8	FSM	ENSG00000166261.11	ENST00000336139.8	4130	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	53.4480483979632	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCACTCTGAGATAAGATC	-123737800	True	NA	NA	False	NA	NA	NA	123741670	123724176	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_123726992_123727475_123727596_123728132_123728263_123729125_123729215_123729614_123729826_123730486_123730986_123740392_123740537_123741548
transcript_40615.nnic	chr11	-	3552	8	NIC	ENSG00000166261.11	novel	4435	9	NA	NA	-44	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_6	46.5477591034308	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTTGTTTGCTTTTTC	-123741639	False	NA	-1	True	AGTAAA	-14	NA	123741719	123724779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_123726992_123727475_123727596_123728132_123728263_123729125_123729215_123729614_123729826_123730486_123730986_123740416_123740537_123741548
transcript_4062.nic	chr1	+	2501	11	NIC	ENSG00000162551.14	novel	2536	12	NA	NA	-85	0	combination_of_known_junctions	FALSE	canonical	3	117	junction_8	208.30468069633	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCCGAGGACAGAGCTGA	NA	False	NA	11	True	AATAAA	-12	NA	21509311	21578399	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_21509518_21553977_21554143_21560625_21560746_21561096_21561213_21563109_21563285_21564040_21564217_21568103_21568248_21570304_21570375_21575732_21575925_21576521_21576642_21577382
transcript_40622.nnic	chr11	-	3105	8	NIC	ENSG00000166261.11	novel	4435	9	NA	NA	-44	-447	combination_of_known_splicesites	FALSE	canonical	3	24	junction_6	46.5477591034308	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCCGTTATTCAACCAG	-123741639	False	NA	-14	True	ATTAAA	-17	NA	123741719	123725226	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_123726992_123727475_123727596_123728132_123728263_123729125_123729215_123729614_123729826_123730486_123730986_123740416_123740537_123741548
transcript_40626.known	chr11	-	3384	7	FSM	ENSG00000166261.11	ENST00000529691.1	3384	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_6	46.5259784063341	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTTGTTTGCTTTTTC	-123737801	True	NA	-1	True	AGTAAA	-14	NA	123741671	123724779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_123726992_123727475_123727596_123728132_123728263_123729125_123729215_123729614_123729826_123730486_123730986_123741548
transcript_40646.known	chr11	-	640	4	FSM	ENSG00000166261.11	ENST00000525391.1	640	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	43.099368389288	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGATTGGCATTGACTA	-123737795	True	NA	-16	True	ATTAAA	-17	NA	123741665	123738623	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_123738911_123740116_123740233_123740416_123740537_123741548
transcript_40648.known	chr11	+	4300	19	FSM	ENSG00000110002.16	ENST00000456829.7	4300	19	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	52.4836541279024	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGATAGGCCCTACCTATG	124113148	True	NA	NA	False	AGTAAA	-45	NA	124115449	124147721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_124115483_124116565_124116681_124117496_124117555_124117672_124117876_124118188_124118412_124118532_124118709_124118974_124119090_124122959_124123130_124123365_124123455_124123659_124123805_124124236_124124317_124134919_124135035_124136128_124136294_124136573_124136675_124137014_124137269_124141597_124141742_124142441_124142573_124145236_124145364_124145865
transcript_40650.known	chr11	+	3419	18	FSM	ENSG00000110002.16	ENST00000392748.5	3419	18	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_12	44.2911880915443	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCAGTGGTTCTTAAAG	124113102	True	NA	NA	False	ATTAAA	-27	NA	124115403	124146909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_124115483_124117496_124117555_124117672_124117876_124118188_124118412_124118532_124118709_124118974_124119090_124122959_124123130_124123365_124123455_124123659_124123805_124124236_124124317_124134919_124135035_124136128_124136294_124136573_124136675_124137014_124137269_124141597_124141742_124142441_124142573_124145236_124145364_124145865
transcript_40655.known	chr11	+	1978	11	FSM	ENSG00000110002.16	ENST00000449321.5	1978	11	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	58.1498925192472	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTCTGTGTATATTATT	124113102	True	NA	18	True	AATAAA	-20	NA	124115403	124124841	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_124115483_124116565_124116681_124117496_124117555_124117672_124117876_124118188_124118412_124118532_124118709_124118974_124119090_124122959_124123130_124123365_124123455_124123659_124123805_124124236
transcript_40656.known	chr11	+	1863	10	FSM	ENSG00000110002.16	ENST00000361352.9	1863	10	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	29.3917767957277	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTCTGTGTATATTATT	124113102	True	NA	18	True	AATAAA	-20	NA	124115403	124124841	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_124115483_124117496_124117555_124117672_124117876_124118188_124118412_124118532_124118709_124118974_124119090_124122959_124123130_124123365_124123455_124123659_124123805_124124236
transcript_40657.known	chr11	+	5144	9	FSM	ENSG00000154144.13	ENST00000441174.8	5144	9	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_3	44.1580966528223	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTATCATCTGCATTT	124620260	True	NA	NA	False	AATAAA	-23	NA	124622863	124635926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_124623234_124624930_124625002_124625670_124625904_124626472_124626610_124626903_124627051_124630387_124630486_124630744_124630856_124631274_124631418_124632092
transcript_40665.nic	chr11	+	1966	8	NIC	ENSG00000154144.13	novel	5144	9	NA	NA	8	0	intron_retention	FALSE	canonical	3	74	junction_3	38.6021042040404	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTCTGTTTACTTTCATC	124620240	True	NA	8	True	AATAAA	-11	NA	124622843	124632434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_124623234_124624930_124625002_124625670_124625904_124626472_124627051_124630387_124630486_124630744_124630856_124631274_124631418_124632092
transcript_40666.known	chr11	+	1634	8	FSM	ENSG00000154144.13	ENST00000473629.6	1634	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	59.2607520598066	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTCTGTTTACTTTCATC	NA	False	NA	8	True	AATAAA	-11	NA	124622835	124632434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_124623234_124624930_124625002_124625670_124625904_124626812_124627051_124630387_124630486_124630744_124630856_124631274_124631418_124632092
transcript_4067.known	chr1	+	2131	11	FSM	ENSG00000162551.14	ENST00000540617.5	2131	11	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	225.08018571167	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCAGGGTCCCAGGAAGC	21498929	True	NA	NA	False	NA	NA	NA	21509427	21578175	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_21509518_21560625_21560746_21561096_21561213_21563109_21563285_21564040_21564217_21568103_21568248_21570304_21570375_21573664_21573800_21575732_21575925_21576521_21576642_21577382
transcript_40670.known	chr11	+	4468	8	FSM	ENSG00000154144.13	ENST00000284290.8	4468	8	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	41.6065144035922	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTGTTTGGAGCTAC	124620271	True	NA	21	True	AATAAA	-22	NA	124622874	124635398	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_124623234_124624930_124625002_124625670_124625904_124626903_124627051_124630387_124630486_124630744_124630856_124631274_124631418_124632092
transcript_40676.known	chr11	+	2142	7	FSM	ENSG00000154144.13	ENST00000529543.5	2142	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	67.8986172335065	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAAAAGGACCCAGAAGTA	124620390	False	NA	NA	False	NA	NA	NA	124622993	124633424	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_124623234_124624930_124625002_124626903_124627051_124630387_124630486_124630744_124630856_124631274_124631418_124632092
transcript_40678.known	chr11	+	3604	5	FSM	ENSG00000064199.7	ENST00000227135.7	3604	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	9.83298021964857	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCACTTCCACTGACATC	124673361	True	NA	NA	False	NA	NA	NA	124673903	124697518	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_124673953_124675237_124675419_124681388_124681460_124691695_124691783_124694302
transcript_40685.known	chr11	+	1106	4	FSM	ENSG00000154146.13	ENST00000412681.2	1106	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	7.71722460186015	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGAGGGTGCCGGGGGAG	124739912	False	NA	15	True	AATAAA	-17	NA	124740044	124747206	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_124740100_124745502_124745730_124745961_124745983_124746403
transcript_40686.known	chr11	+	1210	4	FSM	ENSG00000154146.13	ENST00000284292.11	1210	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	3.68178700572909	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGTGCCGGGGGAGGGAG	124739809	True	NA	19	True	AATAAA	-21	NA	124739941	124747210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_124740100_124745502_124745730_124745964_124745983_124746403
transcript_40687.known	chr11	-	1833	7	FSM	ENSG00000149564.12	ENST00000417453.5	1833	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.897527467855751	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGCCTTTTCAAACTAAGA	-124762244	False	NA	NA	False	AATAAA	-33	NA	124762280	124753122	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_124753962_124754213_124754341_124754629_124754764_124756206_124756363_124756540_124756743_124758348_124758528_124762084
transcript_40689.known	chr11	+	3510	5	FSM	ENSG00000245498.7	ENST00000664095.1	3510	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	2.8613807855649	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAAGAATGTTATCAGT	124800287	True	NA	NA	False	AATAAA	-5	NA	124800447	124809567	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_124800895_124801983_124802158_124804730_124804849_124805266_124805505_124807034
transcript_40692.nic	chr11	-	2326	5	NIC	ENSG00000120458.13	novel	2495	4	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	43.560303029249	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGCGTACTAGTTGAGC	-124798380	True	NA	NA	False	ATTAAA	-14	NA	124800414	124766497	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_124768029_124772993_124773055_124774718_124774819_124779049_124779140_124799870
transcript_40699.known	chr11	+	1813	4	FSM	ENSG00000245498.7	ENST00000657884.1	1813	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.94392028877595	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTAGCACTTTGGGAGGC	124800601	False	NA	NA	False	AAGAAA	-34	NA	124800761	124806654	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_124800895_124801983_124802158_124804730_124804849_124805266
transcript_40700.known	chr11	-	2528	4	FSM	ENSG00000120458.13	ENST00000674284.1	2528	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	26.9485105752103	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGCGTACTAGTTGAGC	NA	False	NA	NA	False	ATTAAA	-14	NA	124800706	124766497	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_124768029_124772993_124773055_124774718_124774819_124799870
transcript_40702.known	chr11	-	2384	4	FSM	ENSG00000120458.13	ENST00000374979.8	2384	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	40.7376429798725	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGCGTACTAGTTGAGC	-124798372	True	NA	NA	False	ATTAAA	-14	NA	124800406	124766497	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_124768029_124772993_124773055_124774718_124774975_124799870
transcript_40707.known	chr11	+	1942	12	FSM	ENSG00000154134.15	ENST00000527196.5	1942	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	42.0326516133933	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGCCCTGTCTGTCTGGTT	124876100	False	NA	18	True	AATAAA	-20	NA	124876120	124881470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_124876461_124877160_124877185_124877266_124877310_124877518_124877659_124877936_124878132_124878297_124878437_124878583_124878797_124879189_124879342_124879464_124879576_124879786_124879949_124880417_124880609_124881238
transcript_40708.nic	chr11	+	1750	12	NIC	ENSG00000154134.15	novel	2139	12	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_4	39.6655438876215	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCAGGGCCCTGTCTGTC	124876749	False	NA	13	True	AATAAA	-15	NA	124876779	124881465	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_124876933_124877160_124877185_124877266_124877310_124877518_124877659_124877936_124878132_124878297_124878437_124878583_124878797_124879189_124879342_124879464_124879576_124879786_124879949_124880417_124880609_124881238
transcript_40709.known	chr11	+	2139	12	FSM	ENSG00000154134.15	ENST00000525448.5	2139	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	41.094126985827	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCAGGGCCCTGTCTGTCT	124876455	False	NA	14	True	AATAAA	-16	NA	124876485	124881466	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_124876933_124877160_124877185_124877266_124877310_124877518_124877753_124877936_124878132_124878297_124878437_124878583_124878797_124879189_124879342_124879464_124879576_124879786_124879949_124880417_124880609_124881238
transcript_40712.nic	chr11	+	1495	11	NIC	ENSG00000154134.15	novel	1645	11	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_4	38.0958002934707	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCAGGGCCCTGTCTGTC	124875976	True	NA	13	True	AATAAA	-15	NA	124876839	124881465	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_124876933_124877160_124877185_124877266_124877310_124877518_124877659_124878297_124878437_124878583_124878797_124879189_124879342_124879464_124879576_124879786_124879949_124880417_124880609_124881238
transcript_40716.nic	chr11	+	2028	11	NIC	ENSG00000154134.15	novel	2139	12	NA	NA	-34	0	intron_retention	FALSE	canonical	3	22	junction_1	36.7281908076072	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCAGGGCCCTGTCTGTC	124876749	False	NA	13	True	AATAAA	-15	NA	124876779	124881465	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_124876933_124877160_124877185_124877266_124877310_124877518_124878132_124878297_124878437_124878583_124878797_124879189_124879342_124879464_124879576_124879786_124879949_124880417_124880609_124881238
transcript_40718.nic	chr11	+	1692	11	NIC	ENSG00000154134.15	novel	1645	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_3	36.3594554414667	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCAGGGCCCTGTCTGTC	124875950	True	NA	13	True	AATAAA	-15	NA	124876813	124881465	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_124876933_124877266_124877310_124877518_124877659_124877936_124878132_124878297_124878437_124878583_124878797_124879189_124879342_124879464_124879576_124879786_124879949_124880417_124880609_124881238
transcript_40736.nic	chr11	+	2587	9	NIC	ENSG00000154134.15	novel	2139	12	NA	NA	-34	0	intron_retention	FALSE	canonical	3	22	junction_1	35.675402940962	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCAGGGCCCTGTCTGTC	124876749	False	NA	13	True	AATAAA	-15	NA	124876779	124881465	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_124876933_124877160_124877185_124877266_124877310_124877518_124878437_124878583_124879342_124879464_124879576_124879786_124879949_124880417_124880609_124881238
transcript_40756.known	chr11	-	2052	3	FSM	ENSG00000285825.2	ENST00000655771.1	2052	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	3.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCTGAGCCTAGTTATAA	-124953735	True	NA	NA	False	AATAAA	-4	NA	124953966	124949204	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_124950560_124951338_124951551_124953481
transcript_40758.known	chr11	+	3924	16	FSM	ENSG00000149548.15	ENST00000529051.5	3924	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	5.98665181883831	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTTATTTCCTTGCAG	124953782	True	NA	NA	False	AATAAA	-20	NA	124954120	125041487	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_124954371_124954723_124954910_124959114_124959265_124959814_124960004_124975095_124975210_124977477_124977601_124986741_124986889_124987126_124988135_124991460_124991584_124992579_124992688_124993168_124993244_125003866_125003960_125005108_125005213_125038430_125038605_125038887_125039070_125040589
transcript_40761.known	chr11	+	3951	18	FSM	ENSG00000134955.12	ENST00000403796.7	3951	18	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_5	3.16665149028112	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTGAGTCCACGCTGCT	125063261	True	NA	NA	False	AATAAA	-16	NA	125063304	125090516	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_125063427_125076756_125076839_125077229_125077324_125077449_125077529_125079111_125079248_125079683_125079761_125080613_125080781_125081420_125081459_125081753_125081907_125082243_125082335_125083814_125083878_125084233_125084320_125084824_125084874_125085065_125085140_125085394_125085474_125085576_125085675_125085953_125086019_125088118
transcript_40763.known	chr11	+	2696	19	FSM	ENSG00000134955.12	ENST00000308074.4	2696	19	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	3.28107179116298	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCCATGCTCATCTTTG	125063292	False	NA	1	True	AATAGA	-16	NA	125063335	125089235	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_125063427_125076756_125076839_125077229_125077324_125077449_125077529_125079111_125079248_125079683_125079761_125080613_125080781_125081420_125081459_125081753_125081907_125082243_125082335_125083814_125083878_125084233_125084320_125084824_125084874_125085065_125085140_125085394_125085474_125085576_125085675_125085953_125086019_125086203_125086261_125088118
transcript_40766.known	chr11	-	1103	6	FSM	ENSG00000150433.10	ENST00000532407.5	1103	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	43.9017083950044	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTGATAATATATAAAATT	-125110312	True	NA	NA	False	AAAAAG	-20	NA	125111579	125097243	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_125097741_125101200_125101304_125102131_125102318_125102636_125102810_125110643_125110747_125111538
transcript_40770.known	chr11	-	1828	5	FSM	ENSG00000150433.10	ENST00000531909.5	1828	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	30.8625987240219	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTTTTACAACGGTCTC	-125110441	True	NA	NA	False	NA	NA	NA	125111708	125096544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_125097741_125101200_125101304_125102131_125102318_125102636_125102810_125111538
transcript_40772.known	chr11	-	3805	5	FSM	ENSG00000150433.10	ENST00000682305.1	3805	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	28.9179874818425	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAGTATGAATAACAAAC	-125110359	True	NA	NA	False	ATTAAA	-16	NA	125111626	125094388	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_125097741_125101200_125101304_125102131_125102318_125102733_125102810_125111538
transcript_40775.known	chr11	-	1034	5	FSM	ENSG00000150433.10	ENST00000279968.8	1034	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	37.1786228900426	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTGATAATATATAAAATT	-125110312	True	NA	NA	False	AAAAAG	-20	NA	125111579	125097243	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_125097741_125101200_125101304_125102131_125102352_125102636_125102810_125111538
transcript_40783.known	chr11	-	857	4	FSM	ENSG00000150433.10	ENST00000531262.5	857	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	42.4996732013579	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCAGATGTTGGTCATTG	-125110350	True	NA	-128	True	NA	NA	NA	125111617	125097141	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_125097741_125101200_125101304_125102733_125102810_125111538
transcript_40789.known	chr11	+	3642	13	FSM	ENSG00000165495.16	ENST00000298282.14	3642	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	1.93649167310371	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTGCACAATTCTCTT	125164460	True	NA	29	True	AGTAAA	-19	NA	125164750	125433389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_125164777_125235044_125235116_125331818_125331926_125351283_125351393_125367845_125367986_125385550_125385723_125397873_125398063_125410195_125410326_125410778_125410877_125411745_125411866_125429011_125429089_125429962_125430142_125431165
transcript_40796.nic	chr11	-	1863	11	NIC	ENSG00000149557.14	novel	4583	10	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_8	117.187925999226	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCTTCATGTGCTTTGG	-125493264	True	NA	-9	True	AATAAA	-16	NA	125496309	125445752	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_125446112_125448501_125448568_125452333_125452410_125454129_125454211_125455834_125456107_125460497_125460667_125463483_125463571_125469048_125469157_125481533_125481634_125489466_125489823_125496120
transcript_40801.known	chr11	-	4583	10	FSM	ENSG00000149557.14	ENST00000278919.8	4583	10	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_6	53.641010660607	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTAGTCCCAGCTTACT	-125493220	True	NA	NA	False	AATACA	-27	NA	125496265	125442880	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_125446112_125448501_125448568_125452333_125452410_125454129_125454211_125455834_125456107_125460497_125460667_125463483_125463571_125481533_125481634_125489466_125489823_125496120
transcript_40804.nnic	chr11	-	1690	9	NIC	ENSG00000149557.14	novel	4583	10	NA	NA	8	1	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	104.864719400759	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTCATGTGCTTTGGA	-125493264	True	NA	-8	True	AATAAA	-17	NA	125496309	125445751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_125446112_125452333_125452410_125454129_125454211_125455834_125456107_125460497_125460667_125463483_125463571_125481533_125481634_125489466_125489823_125496120
transcript_40808.known	chr11	-	1053	2	FSM	ENSG00000149557.14	ENST00000366139.3	1053	2	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGGTGATGTGGCCTTTG	-125493232	True	NA	NA	False	AGTAAA	-8	NA	125496277	125488926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_125489823_125496120
transcript_40810.known	chr11	-	569	2	FSM	ENSG00000149557.14	ENST00000527534.1	569	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACCGAGAACCTAGCTCC	-125493077	False	NA	NA	False	AATGAA	-43	NA	125496122	125489540	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_125489823_125495835
transcript_40815.nic	chr11	+	1926	12	NIC	ENSG00000149547.15	novel	2191	11	NA	NA	-62	0	combination_of_known_junctions	TRUE	canonical	3	71	junction_2	500.771058361565	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGCCTGAAGA	125554637	True	NA	NA	False	NA	NA	NA	125569395	125584251	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_125569574_125570103_125570191_125572457_125572570_125575262_125575409_125576254_125576316_125577503_125577571_125578132_125578258_125578948_125579069_125580092_125580205_125581210_125581323_125582345_125582421_125583520
transcript_40818.known	chr11	+	2191	11	FSM	ENSG00000149547.15	ENST00000278903.11	2191	11	0	0	0	0	multi-exon	FALSE	canonical	3	1197	junction_9	95.5403579645796	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTAATGGTTGAATTTG	125554718	True	NA	17	True	ATTAAA	-22	NA	125569476	125584684	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_125569574_125572457_125572570_125575262_125575409_125576254_125576316_125577503_125577571_125578132_125578258_125578948_125579069_125580092_125580205_125581210_125581323_125582345_125582421_125583520
transcript_40821.known	chr11	+	1544	11	FSM	ENSG00000149547.15	ENST00000534546.5	1544	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	413.436440096903	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTATTTTGTGAATT	125554699	True	NA	NA	False	NA	NA	NA	125569457	125584060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_125569574_125572457_125572570_125575304_125575409_125576254_125576316_125577503_125577571_125578132_125578258_125578948_125579069_125580092_125580205_125581210_125581323_125582345_125582421_125583520
transcript_40828.known	chr11	+	1625	10	FSM	ENSG00000149547.15	ENST00000527235.6	1625	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_8	433.536391170494	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	125554730	True	NA	NA	False	NA	NA	NA	125569488	125584242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_125569574_125572457_125572570_125575262_125575409_125576254_125576316_125577503_125577571_125578132_125578258_125578948_125579069_125580092_125580205_125582345_125582421_125583520
transcript_4083.known	chr1	+	2241	10	FSM	ENSG00000162551.14	ENST00000539907.5	2241	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	319.969713072895	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCCGAGGACAGAGCTGA	21498927	True	NA	11	True	AATAAA	-12	NA	21509425	21578399	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_21509518_21560625_21560746_21563109_21563285_21564040_21564217_21568103_21568248_21570304_21570375_21573664_21573800_21575732_21575925_21576521_21576642_21577382
transcript_40835.known	chr11	+	1407	10	FSM	ENSG00000149547.15	ENST00000615917.4	1407	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	432.27488967891	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACCCTTGGATGAATGGA	125554699	True	NA	NA	False	NA	NA	NA	125569457	125584027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_125569574_125572457_125572570_125576254_125576316_125577503_125577571_125578132_125578258_125578948_125579069_125580092_125580205_125581210_125581323_125582345_125582421_125583520
transcript_40848.known	chr11	+	4173	19	FSM	ENSG00000134910.14	ENST00000649491.1	4173	19	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	371.674887801452	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGATGTCTTTCATAT	125564637	True	NA	-32	True	AATGAA	-11	NA	125592857	125622721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_125592919_125594049_125594098_125595880_125596004_125597058_125597120_125602302_125602425_125602802_125602949_125604156_125604248_125605628_125605736_125606300_125606466_125608108_125608290_125609433_125609590_125611427_125611520_125612591_125612748_125612988_125613178_125614086_125614204_125614323_125614427_125618372_125618562_125620010_125620127_125620771
transcript_40852.known	chr11	+	2402	19	FSM	ENSG00000134910.14	ENST00000529196.5	2402	19	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	376.734687401304	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATATGCAGTTTGTAAG	125564615	True	NA	24	True	NA	NA	NA	125592835	125620888	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_125592919_125593637_125593726_125595880_125596004_125597058_125597120_125602302_125602425_125602802_125602949_125604156_125604248_125605628_125605736_125606300_125606466_125608108_125608290_125609433_125609590_125611427_125611520_125612591_125612748_125612988_125613178_125614086_125614204_125614323_125614427_125618372_125618562_125620010_125620127_125620771
transcript_40863.known	chr11	+	4501	18	FSM	ENSG00000134910.14	ENST00000392708.9	4501	18	0	0	0	0	multi-exon	FALSE	canonical	3	967	junction_9	104.121269461745	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGTGGGACCCAAAAAAGC	125564631	True	NA	NA	False	NA	NA	NA	125592851	125623091	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_125592919_125595880_125596004_125597058_125597120_125602302_125602425_125602802_125602949_125604156_125604248_125605628_125605736_125606300_125606466_125608108_125608290_125609433_125609590_125611427_125611520_125612591_125612748_125612988_125613178_125614086_125614204_125614323_125614427_125618372_125618562_125620010_125620127_125620771
transcript_40879.known	chr11	+	2160	17	FSM	ENSG00000134910.14	ENST00000531491.5	2160	17	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	292.602165651162	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATATGCAGTTTGTAAG	125564646	True	NA	24	True	NA	NA	NA	125592866	125620888	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_125592919_125597058_125597120_125602302_125602425_125602802_125602949_125604156_125604248_125605628_125605736_125606300_125606466_125608108_125608290_125609433_125609590_125611427_125611520_125612591_125612748_125612988_125613178_125614086_125614204_125614323_125614427_125618372_125618562_125620010_125620127_125620771
transcript_40894.known	chr11	+	1845	14	FSM	ENSG00000149554.14	ENST00000428830.6	1845	14	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_13	82.1032687873152	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTTGATTCTTTCCTGG	125620755	True	NA	21	True	AATAAA	-16	NA	125625973	125676255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_125626013_125626748_125626834_125627606_125627831_125629231_125629297_125629390_125629461_125633162_125633352_125635428_125635534_125637448_125637545_125643791_125643901_125644090_125644269_125644511_125644644_125653745_125653848_125655224_125655348_125675927
transcript_40902.known	chr11	+	4128	13	FSM	ENSG00000149554.14	ENST00000438015.7	4128	13	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	48.6743002004138	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAACAGTTCAAATTTTGA	NA	False	NA	23	True	AATAAA	-25	NA	125625162	125657147	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_125626013_125626748_125626834_125627606_125627831_125629231_125629297_125629390_125629461_125633162_125633352_125635428_125635534_125637448_125637545_125643791_125643901_125644090_125644269_125644511_125644644_125653745_125653848_125655224
transcript_40904.known	chr11	+	3390	13	FSM	ENSG00000149554.14	ENST00000532449.6	3390	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	82.498947804738	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGGAATTTGTATAGAAT	125621010	False	NA	NA	False	NA	NA	NA	125626228	125656845	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_125626643_125626748_125626834_125627606_125627831_125629231_125629297_125629390_125629461_125633162_125633352_125635428_125635534_125637448_125637545_125643791_125643901_125644090_125644269_125644511_125644644_125653745_125653848_125655224
transcript_40906.known	chr11	+	1653	12	FSM	ENSG00000149554.14	ENST00000544373.5	1653	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	87.5080161617322	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTAAGATGAACCAATAAAG	125620758	True	NA	-31	True	AAAAAG	-24	NA	125625976	125655710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_125626013_125626748_125626834_125629231_125629297_125629390_125629461_125633162_125633352_125635428_125635534_125637448_125637545_125643791_125643901_125644090_125644269_125644511_125644644_125653745_125653848_125655224
transcript_40910.known	chr11	+	668	7	FSM	ENSG00000149554.14	ENST00000527013.6	668	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	107.911615068382	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGACCAACCCAGTGACA	125620783	True	NA	NA	False	TTTAAA	-34	NA	125626001	125635435	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_125626030_125626748_125626834_125627606_125627831_125629231_125629297_125629390_125629461_125633162_125633352_125635428
transcript_40915.known	chr11	+	1451	3	FSM	ENSG00000198331.11	ENST00000425380.7	1451	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	4.5	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACTTGAACATTATTTCA	125886757	True	NA	10	True	ATTAAA	-17	NA	125887667	125900646	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_125887766_125891422_125891473_125899343
transcript_40916.known	chr11	-	1419	3	FSM	ENSG00000110060.9	ENST00000613398.4	1419	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	42.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGATTTGTTGTGTTTTT	-125901570	True	NA	-5	True	ATTAAA	-17	NA	125903221	125893485	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_125894287_125895223_125895790_125903169
transcript_40921.known	chr11	-	1829	4	FSM	ENSG00000110060.9	ENST00000227474.8	1829	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	25.8499946271217	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGATTTGTTGTGTTTTTC	-125901555	True	NA	-4	True	ATTAAA	-18	NA	125903206	125893484	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_125894287_125895223_125895790_125895906_125896331_125903169
transcript_40923.known	chr11	+	7424	12	FSM	ENSG00000109832.14	ENST00000263576.11	7424	12	0	0	0	0	multi-exon	TRUE	canonical	3	87	junction_9	9.23521825396385	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTGTCTATCTCAGTCT	125903423	True	NA	17	True	AATAAA	-33	NA	125904507	125928843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_125904581_125905211_125905279_125905552_125905598_125906073_125906210_125908195_125908289_125908400_125908504_125910363_125910479_125911310_125911489_125917013_125917252_125918627_125918791_125921190_125921380_125922819
transcript_40927.known	chr11	-	2339	7	FSM	ENSG00000064309.16	ENST00000682556.1	2339	7	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_6	7.86694914747063	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTTAAATTTGCATTTC	-126062692	False	NA	NA	False	AGTAAA	-26	NA	126062723	126014305	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_126015511_126017087_126017376_126018329_126018474_126019618_126019766_126021247_126021521_126023400_126023538_126062578
transcript_40930.known	chr11	-	1791	7	FSM	ENSG00000165526.9	ENST00000526942.5	1791	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	75.6431681574013	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTGTTAGCTCCAGCT	-126208291	True	NA	NA	False	NA	NA	NA	126211629	126202781	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_126203658_126204230_126204329_126205467_126205613_126205687_126205782_126209490_126209723_126210889_126211056_126211449
transcript_40931.known	chr11	-	2468	7	FSM	ENSG00000165526.9	ENST00000298317.9	2468	7	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	19.6588967702214	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGAGATGACTATATTTGT	-126208312	True	NA	-3	True	AATAAA	-19	NA	126211650	126202095	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_126203658_126204230_126204329_126205467_126205613_126205687_126205782_126209520_126209723_126210889_126211056_126211449
transcript_40940.known	chr11	-	1030	3	FSM	ENSG00000165526.9	ENST00000532800.1	1030	3	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_2	28.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGGGTGACAGAGTGAG	-126208292	True	NA	NA	False	NA	NA	NA	126211630	126209039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_126209723_126210889_126211056_126211449
transcript_40942.known	chr11	-	2986	14	FSM	ENSG00000182934.12	ENST00000332118.11	2986	14	0	0	0	0	multi-exon	TRUE	canonical	2	178	junction_10	60.3331971186362	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTTTAGGTCTTGGAG	-126260905	True	NA	-27	True	AATAAA	-14	NA	126268895	126262937	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_126264045_126264190_126264290_126264375_126264540_126264958_126265173_126265267_126265441_126265736_126265824_126265962_126266082_126266186_126266279_126266475_126266630_126266762_126266923_126267174_126267336_126267548_126267713_126268002_126268087_126268687
transcript_40944.known	chr11	-	2453	13	FSM	ENSG00000182934.12	ENST00000532259.1	2453	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_12	115.029947791386	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGGTCCCCAGGACCT	NA	False	NA	NA	False	NA	NA	NA	126268982	126263473	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_126264045_126264190_126264290_126264375_126264540_126264958_126265173_126265267_126265441_126265736_126265824_126265962_126266082_126266186_126266279_126266475_126266630_126266762_126266923_126267174_126267336_126267548_126267713_126268687
transcript_40954.known	chr11	+	1951	11	FSM	ENSG00000110074.12	ENST00000263578.10	1951	11	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_5	14.871449156017	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGTCTTCTGTCTCTT	126266131	True	NA	10	True	AATACA	-17	NA	126269153	126278126	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_126269292_126271436_126271658_126272968_126273080_126273335_126273455_126274926_126275022_126275326_126275429_126275793_126275871_126276058_126276220_126276393_126276524_126277070_126277176_126277434
transcript_40960.known	chr11	+	1825	11	FSM	ENSG00000110074.12	ENST00000687699.1	1827	11	2	0	2	0	multi-exon	FALSE	canonical	2	10	junction_1	92.319282926158	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCAATCCATCTGGAGGCC	126266186	True	NA	NA	False	NA	NA	NA	126269208	126277931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_126269416_126271436_126271658_126272968_126273080_126273335_126273455_126274926_126275022_126275326_126275429_126275793_126275871_126276058_126276220_126276393_126276524_126277070_126277176_126277434
transcript_40975.known	chr11	+	1760	10	FSM	ENSG00000110074.12	ENST00000527004.5	1760	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	129.599382714579	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGATTTTCGTCTGTTTA	126266167	True	NA	-47	True	NA	NA	NA	126269189	126278069	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_126269292_126271436_126271658_126272968_126273080_126273338_126273455_126275326_126275429_126275793_126275871_126276058_126276220_126276393_126276524_126277070_126277176_126277434
transcript_40979.known	chr11	+	1427	10	FSM	ENSG00000110074.12	ENST00000525770.5	1427	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	96.3605626005336	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCAGGCACAGGCAGTGAG	126266148	True	NA	NA	False	NA	NA	NA	126269170	126277840	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_126269292_126272968_126273080_126273335_126273455_126274926_126275022_126275326_126275429_126275793_126275871_126276058_126276220_126276393_126276524_126277070_126277176_126277434
transcript_40982.known	chr11	+	2016	9	FSM	ENSG00000197798.9	ENST00000533050.6	2016	9	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_7	58.7663541067506	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTATTTCTCTGGGCAG	126208702	True	NA	-16	True	TATAAA	-1	NA	126211781	126262968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_126211831_126229224_126229294_126234994_126235088_126240791_126241045_126250505_126250734_126254304_126254434_126256566_126256853_126261424_126261485_126262119
transcript_41.known	ERCC-00109	+	520	1	FSM	ERCC-00109A	DQ854998	520	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	520	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00109_+_0_500
transcript_410.known	chr1	-	2095	7	FSM	ENSG00000078808.19	ENST00000465727.5	2095	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	288.284244376198	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTTTTTGGTCAGCT	-1225940	True	NA	16	True	AATATA	-1	NA	1232031	1216930	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1217805_1218457_1218634_1218768_1218944_1223243_1223358_1223831_1223969_1228467_1228947_1231891
transcript_41000.known	chr11	+	1616	8	FSM	ENSG00000197798.9	ENST00000360194.8	1616	8	0	0	0	0	multi-exon	TRUE	canonical	3	56	junction_1	153.869809798241	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTTCATTTACTTGC	126208693	True	NA	-11	True	NA	NA	NA	126211772	126262631	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_126211831_126234994_126235088_126240791_126241045_126250505_126250734_126254304_126254434_126256566_126256853_126261427_126261485_126262119
transcript_41019.nnic	chr11	+	2785	7	NNC	ENSG00000110063.10	novel	5427	6	NA	NA	-13	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	64.6185387915539	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCCCACCCCCTTTTGGT	126300375	True	NA	3	True	AATAAA	-16	NA	126304046	126349997	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_126304282_126306569_126306745_126331404_126331551_126338285_126338400_126343306_126343418_126345346_126346578_126349224
transcript_4102.known	chr1	+	703	5	FSM	ENSG00000162551.14	ENST00000468526.1	703	5	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	294.510929338794	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACGTGAGTGCTCGGGGG	21498898	True	NA	NA	False	NA	NA	NA	21509396	21564211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_21509518_21560625_21560746_21561096_21561213_21563109_21563285_21564040
transcript_41025.known	chr11	+	2068	6	FSM	ENSG00000150455.14	ENST00000392680.6	2068	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	3.8262252939418	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTACTTTTGTGCCCCCC	126282567	True	NA	8	True	AATGAA	-19	NA	126283117	126294684	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_126283154_126289664_126289818_126290461_126290586_126290802_126290962_126292476_126293056_126293667
transcript_41030.known	chr11	+	5427	6	FSM	ENSG00000110063.10	ENST00000263579.5	5427	6	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_2	12.1885191881541	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCCTTTTGGTTTTTTTGC	126300388	True	NA	11	True	AATAAA	-24	NA	126304059	126350005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_126304282_126306569_126306745_126331404_126331551_126338285_126338400_126343306_126343418_126345346
transcript_41035.known	chr11	+	2189	5	FSM	ENSG00000150455.14	ENST00000392679.6	2189	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	2.38484800354236	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAAAAAATCAG	126282542	True	NA	NA	False	NA	NA	NA	126283092	126294933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_126283154_126290461_126290586_126290802_126290962_126292476_126293056_126293667
transcript_41051.known	chr11	-	1572	2	FSM	ENSG00000280832.2	ENST00000629441.2	1579	2	0	7	0	-7	multi-exon	FALSE	canonical	3	45	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACACACAGGTGATCCTTT	-126355044	True	NA	NA	False	AATAAA	-15	NA	126355579	126340888	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_126342323_126355441
transcript_41053.known	chr11	-	416	2	FSM	ENSG00000255062.2	ENST00000524964.2	423	2	5	2	3	-2	multi-exon	FALSE	canonical	3	19	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTTTGAAGTGAATCG	-126303784	True	NA	-1	True	AATAAA	-38	NA	126304318	126294297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_126294603_126304207
transcript_41054.known	chr11	-	3820	17	FSM	ENSG00000149571.12	ENST00000525144.7	3820	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	0.807677998957505	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGTGGCAATTAAACCT	-127000752	False	NA	NA	False	AATAAA	-19	NA	127000770	126423357	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_126425024_126425637_126425725_126429178_126429289_126431418_126431527_126435267_126435304_126436810_126437010_126440448_126440550_126444978_126445106_126446758_126446887_126449008_126449158_126456348_126456455_126463156_126463308_126473308_126473467_126521314_126521465_126526537_126526688_126562834_126562913_127000454
transcript_41065.known	chr11	+	1810	11	FSM	ENSG00000110080.20	ENST00000444328.7	1810	11	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	7.54254598925323	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTGTGATGTCCTGTGT	126354301	True	NA	13	True	ATTAAA	-21	NA	126355685	126414638	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_126355843_126406095_126406172_126406472_126406558_126406942_126407024_126407251_126407350_126407573_126407635_126408098_126408195_126408306_126408497_126409267_126409412_126413504_126413649_126413960
transcript_41066.known	chr11	+	1685	11	FSM	ENSG00000110080.20	ENST00000677503.1	1685	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	25.6780061531265	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATTAAACTATTTTTCCT	126354303	True	NA	-16	True	NA	NA	NA	126355687	126414609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_126355843_126406095_126406172_126406472_126406546_126406942_126407024_126407251_126407350_126407573_126407635_126408098_126408195_126408306_126408497_126409267_126409412_126413586_126413649_126413960
transcript_41071.known	chr11	+	1919	11	FSM	ENSG00000110080.20	ENST00000534083.5	1919	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	19.6226909469624	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGGACCTCATCTAGAAAA	126355937	True	NA	-50	True	NA	NA	NA	126355973	126414575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_126356303_126406095_126406172_126406472_126406558_126406942_126407024_126407251_126407350_126407573_126407635_126408098_126408195_126408306_126408497_126409267_126409412_126413504_126413649_126413960
transcript_41073.nic	chr11	+	1766	10	NIC	ENSG00000110080.20	novel	1810	11	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_6	19.7865149240463	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTGTGATGTCCTGTGT	126354249	True	NA	13	True	ATTAAA	-21	NA	126355633	126414638	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_126355843_126406095_126406172_126406472_126406558_126406942_126407024_126407251_126407350_126407573_126407635_126408306_126408497_126409267_126409412_126413504_126413649_126413960
transcript_41075.known	chr11	-	5139	10	FSM	ENSG00000134954.14	ENST00000392668.8	5139	10	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_4	11.5705031528398	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGGCTTTGGCTTGAT	-128583489	True	NA	-7	True	ATTAAA	-22	NA	128587558	128458764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_128462577_128463508_128463628_128480190_128480452_128484822_128485072_128486068_128486147_128489289_128489491_128490456_128490577_128556290_128556436_128573061_128573145_128587487
transcript_41078.known	chr11	-	655	4	FSM	ENSG00000134954.14	ENST00000525404.5	655	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	52.6645569197687	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATCTTATATTTTTATTT	-128583473	True	NA	NA	False	AATAAA	-15	NA	128587542	128536411	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_128536784_128556290_128556436_128573061_128573145_128587487
transcript_41083.known	chr11	+	3825	9	FSM	ENSG00000151702.17	ENST00000527786.7	3825	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.19895788082818	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTTCCTCCTATTTTCT	128694038	True	NA	NA	False	AATAAA	-18	NA	128694071	128813267	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_128694277_128758114_128758327_128768117_128768273_128772781_128772986_128781957_128782024_128805365_128805432_128807179_128807240_128809156_128809205_128810458
transcript_41085.known	chr11	-	609	4	FSM	ENSG00000174370.12	ENST00000524878.2	3609	4	9	2991	9	-2991	multi-exon	FALSE	canonical	1	2	junction_2	3.09120616516523	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTCTCCTTGCCAATAG	-128905965	True	NA	NA	False	NA	NA	NA	128906035	128902556	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_128902714_128903366_128903512_128904430_128904612_128905909
transcript_41094.nic	chr11	-	5151	28	NIC	ENSG00000170322.15	novel	5173	27	NA	NA	-21	-144	combination_of_known_junctions	FALSE	canonical	3	22	junction_25	39.0299030658972	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGACCAATTTGTGTTT	-129892404	True	NA	-9	True	AATAAA	-17	NA	129895611	129863779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_129864851_129864965_129865102_129865876_129865984_129869493_129870262_129872883_129873097_129873744_129874016_129874112_129874334_129874500_129874581_129874792_129874917_129875356_129875464_129876720_129876896_129877324_129877386_129878308_129878356_129878463_129878544_129881442_129881509_129881726_129881854_129882085_129882195_129882450_129882632_129883121_129883207_129884069_129884144_129884744_129884847_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129893296_129893386_129894358_129894439_129895495
transcript_41100.known	chr11	-	5173	27	FSM	ENSG00000170322.15	ENST00000682444.1	5173	27	0	0	0	0	multi-exon	TRUE	canonical	3	68	junction_25	28.4252367244362	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTGTT	-129892371	True	NA	-4	True	AGTAAA	-18	NA	129895578	129863635	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_129864851_129864965_129865102_129865876_129865984_129869493_129870262_129872883_129873097_129873744_129874016_129874112_129874334_129874500_129874581_129874792_129874917_129875356_129875464_129876720_129876896_129877324_129877386_129878308_129878356_129878463_129878544_129881442_129881509_129881726_129881854_129882085_129882195_129882450_129882632_129883121_129883207_129884069_129884144_129884744_129884847_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129894358_129894439_129895495
transcript_41101.nic	chr11	-	5098	27	NIC	ENSG00000170322.15	novel	5173	27	NA	NA	-21	-144	combination_of_known_junctions	FALSE	canonical	3	48	junction_21	30.9329538378748	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGACCAATTTGTGTTT	-129892404	True	NA	-9	True	AATAAA	-17	NA	129895611	129863779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_129864851_129864965_129865102_129865876_129865984_129869493_129870262_129872883_129873097_129873744_129874016_129874112_129874334_129874500_129874581_129874792_129874917_129875356_129875464_129876720_129876896_129877324_129877386_129878308_129878356_129878463_129878544_129881442_129881509_129881726_129881854_129882085_129882195_129882450_129882632_129883121_129883207_129884069_129884144_129884744_129884883_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129894358_129894439_129895495
transcript_41105.nic	chr11	-	4957	26	NIC	ENSG00000170322.15	novel	5173	27	NA	NA	-2	-144	combination_of_known_junctions	FALSE	canonical	3	48	junction_25	30.1634480787592	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGACCAATTTGTGTTT	-129892379	True	NA	-9	True	AATAAA	-17	NA	129895586	129863779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_129864851_129864965_129865102_129865876_129865984_129869493_129870262_129872883_129873097_129873744_129874016_129874112_129874334_129874500_129874581_129874792_129874917_129875356_129875464_129876720_129876896_129877324_129877386_129878308_129878356_129878463_129878544_129881442_129881509_129881726_129881854_129882085_129882195_129882450_129882632_129883121_129883207_129884069_129884144_129884744_129884847_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129895495
transcript_41120.nic	chr11	-	1279	11	NIC	ENSG00000170322.15	novel	4114	27	NA	NA	-21	2184	combination_of_known_junctions	FALSE	canonical	3	22	junction_8	51.4688255160345	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGATCAAATCAGAGGCAGAG	-129892404	True	NA	26	True	AATAAA	-3	NA	129895611	129882559	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_129882632_129883121_129883207_129884069_129884144_129884744_129884847_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129893296_129893386_129894358_129894439_129895495
transcript_41125.nic	chr11	-	1190	10	ISM	ENSG00000170322.15	ENST00000682444.1	5173	27	-33	18924	-21	2184	5prime_fragment	FALSE	canonical	3	68	junction_8	36.5121322640727	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGATCAAATCAGAGGCAGAG	-129892404	True	NA	26	True	AATAAA	-3	NA	129895611	129882559	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_-_129882632_129883121_129883207_129884069_129884144_129884744_129884847_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129894358_129894439_129895495
transcript_41130.nic	chr11	-	1085	9	NIC	ENSG00000170322.15	novel	5173	27	NA	NA	-2	2184	combination_of_known_junctions	FALSE	canonical	3	48	junction_8	42.0765671128242	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGATCAAATCAGAGGCAGAG	-129892379	True	NA	26	True	AATAAA	-3	NA	129895586	129882559	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_129882632_129883121_129883207_129884069_129884144_129884744_129884847_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129895495
transcript_41131.nic	chr11	-	1121	9	NIC	ENSG00000170322.15	novel	3066	23	NA	NA	-2	2184	combination_of_known_junctions	FALSE	canonical	3	48	junction_4	46.5105834730118	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGATCAAATCAGAGGCAGAG	-129892379	True	NA	26	True	AATAAA	-3	NA	129895586	129882559	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_129882632_129883121_129883207_129884069_129884144_129884744_129884883_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129895495
transcript_41140.known	chr11	-	6305	21	FSM	ENSG00000170325.16	ENST00000360871.8	6305	21	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_8	10.5890273396568	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGAGCTATTTTTTTTTCT	-130001672	True	NA	-1	True	AATAAA	-39	NA	130002835	129899710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_129902517_129905637_129905742_129910475_129910657_129912084_129912226_129914703_129915019_129915659_129915861_129917126_129917238_129918538_129918719_129923247_129923404_129924881_129925230_129931015_129931259_129932101_129932232_129935100_129935219_129937597_129937671_129942425_129942630_129944770_129945013_129947144_129947371_129955511_129955572_129957745_129957911_129960895_129961083_130002721
transcript_41141.known	chr11	-	6182	21	FSM	ENSG00000170325.16	ENST00000528746.5	6182	21	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_17	13.5383713939307	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTACAAGAGCTATTTTT	-130001672	True	NA	-7	True	AATAAA	-33	NA	130002835	129899716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_129902517_129905637_129905742_129910475_129910657_129912123_129912226_129914703_129915019_129915659_129915861_129917126_129917238_129918538_129918719_129923247_129923404_129924881_129925230_129931015_129931259_129932101_129932232_129935100_129935219_129937597_129937671_129942425_129942630_129944770_129945013_129947144_129947293_129955511_129955572_129957745_129957911_129960895_129961083_130002721
transcript_41150.known	chr11	+	3727	18	FSM	ENSG00000084234.18	ENST00000263574.9	3727	18	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_14	703.158593007591	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTCGTTTCACTGACTGC	130029741	True	NA	32	True	AATAAA	-21	NA	130069905	130144811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_130070083_130109428_130109603_130110537_130110662_130120705_130120819_130121613_130121811_130122304_130122514_130123611_130123780_130126699_130126831_130127765_130127841_130129047_130129207_130130037_130130167_130133628_130133729_130135562_130135716_130137255_130137292_130140397_130140484_130141497_130141573_130141918_130142075_130143346
transcript_41156.known	chr11	+	3697	17	FSM	ENSG00000084234.18	ENST00000338167.10	3697	17	0	0	0	0	multi-exon	FALSE	canonical	3	638	junction_7	497.655880101903	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAGACTGCTCGTTTCACT	130029729	True	NA	26	True	AATAAA	-15	NA	130069893	130144805	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_130070083_130109428_130109603_130110537_130110662_130120705_130120819_130121613_130121811_130122304_130122514_130123611_130123780_130126699_130126831_130127765_130127841_130129047_130129207_130130037_130130167_130133628_130133729_130135562_130135716_130140397_130140484_130141497_130141573_130141918_130142075_130143346
transcript_4116.known	chr1	-	2489	25	FSM	ENSG00000076864.21	ENST00000495204.5	2489	25	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_24	15.479769503739	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGCCCCCTCCCTGGGCC	-21651583	True	NA	NA	False	NA	NA	NA	21651836	21597007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_21597265_21597685_21597729_21597960_21598065_21598399_21598503_21599493_21599618_21601683_21601798_21602803_21602914_21606065_21606198_21608212_21608351_21608849_21608937_21609574_21609647_21610119_21610276_21611451_21611582_21611715_21611817_21612025_21612110_21613175_21613230_21613627_21613707_21613985_21614090_21617305_21617492_21617933_21617973_21619024_21619073_21620014_21620051_21626303_21626398_21649760_21649797_21651778
transcript_41161.nic	chr11	+	3638	17	NIC	ENSG00000084234.18	novel	3727	18	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	304	junction_13	620.121633104143	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAGACTGCTCGTTTCACT	130029656	True	NA	26	True	AATAAA	-15	NA	130069820	130144805	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_130070083_130109428_130109603_130110537_130110662_130120705_130120819_130121613_130121811_130122304_130122514_130126699_130126831_130127765_130127841_130129047_130129207_130130037_130130167_130133628_130133729_130135562_130135716_130137255_130137292_130140397_130140484_130141497_130141573_130141918_130142075_130143346
transcript_4117.known	chr1	-	3322	25	FSM	ENSG00000076864.21	ENST00000374765.9	3322	25	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_24	16.4430308607899	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGAGTTGGGCCTGGCTT	-21669048	True	NA	-6	True	AATAAA	-21	NA	21669357	21596220	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_21597265_21597685_21597729_21597960_21598065_21598399_21598503_21599493_21599618_21601683_21601798_21602803_21602914_21606065_21606198_21608212_21608351_21608849_21608937_21609574_21609647_21610119_21610276_21611451_21611582_21611715_21611817_21612025_21612110_21613175_21613230_21613627_21613707_21613985_21614090_21617305_21617492_21617933_21617973_21619024_21619073_21620014_21620051_21626303_21626398_21649760_21649797_21669253
transcript_41180.known	chr11	+	2530	16	FSM	ENSG00000084234.18	ENST00000528499.5	2530	16	0	0	0	0	multi-exon	FALSE	canonical	3	1467	junction_6	257.563368686017	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATATGCAGGCTGTCGTT	130029729	True	NA	17	True	AATAAA	-28	NA	130069893	130143806	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_130070083_130109428_130109603_130110537_130110662_130120705_130120819_130121613_130121811_130122304_130122514_130126699_130126831_130127765_130127841_130129047_130129207_130130037_130130167_130133628_130133729_130135562_130135716_130140397_130140484_130141497_130141573_130141918_130142075_130143346
transcript_41190.nnic	chr11	+	3449	15	NIC	ENSG00000084234.18	novel	3697	17	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	3	67	junction_11	568.068136901961	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAGACTGCTCGTTTCACT	130029656	True	NA	26	True	AATAAA	-15	NA	130069820	130144805	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_130070083_130109428_130109603_130110537_130110662_130120705_130120819_130121613_130121811_130122304_130122514_130126699_130126831_130127765_130127841_130129047_130129207_130130037_130130167_130133628_130133729_130140397_130140484_130141497_130141573_130141918_130142075_130143346
transcript_41192.known	chr11	+	2041	15	FSM	ENSG00000084234.18	ENST00000533616.5	2041	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	796.494029981342	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGCAGCCGCTGCCAGG	130029672	True	NA	NA	False	NA	NA	NA	130069836	130143522	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_130070083_130120705_130120819_130121613_130121811_130122304_130122514_130126699_130126831_130127765_130127841_130129047_130129207_130130037_130130167_130133628_130133729_130135562_130135716_130137255_130137292_130140397_130140484_130141497_130141573_130141918_130142075_130143346
transcript_41198.known	chr11	+	1862	13	FSM	ENSG00000084234.18	ENST00000345598.9	1862	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	614.59977944097	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATCTATTGCAGATATTT	130029751	True	NA	19	True	TATAAA	-16	NA	130069915	130143679	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_130070083_130109428_130109603_130110537_130110662_130126699_130126831_130127765_130127841_130129047_130129207_130130037_130130167_130133628_130133729_130135562_130135716_130140397_130140484_130141497_130141573_130141918_130142075_130143346
transcript_41210.nic	chr11	+	786	5	ISM	ENSG00000084234.18	ENST00000528499.5	2530	16	-73	22080	-16	0	5prime_fragment	FALSE	canonical	3	1754	junction_3	208.347516183899	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTGTGTCAAAAGAAGAGG	130029656	True	NA	NA	False	NA	NA	NA	130069820	130121726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_130070083_130109428_130109603_130110537_130110662_130120705_130120819_130121613
transcript_41219.known	chr11	+	3305	19	FSM	ENSG00000149418.11	ENST00000278742.6	3305	19	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_10	19.1927358943719	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAAGTTTCTTTTCCTACT	130157285	True	NA	19	True	AGTAAA	-19	NA	130159781	130210362	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_130160061_130188113_130188274_130188529_130188658_130188868_130188940_130189738_130189897_130190112_130190149_130190453_130190695_130194148_130194289_130194639_130194738_130196338_130196449_130196569_130196701_130197840_130197946_130198307_130198419_130198507_130198622_130198946_130199070_130199950_130200138_130208409_130208685_130209441_130209579_130209661
transcript_41226.nic	chr11	+	3453	18	ISM	ENSG00000149418.11	ENST00000278742.6	3305	19	-65	0	-65	0	intron_retention	FALSE	canonical	3	196	junction_10	19.5395083751678	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAAGTTTCTTTTCCTACT	130157220	True	NA	19	True	AGTAAA	-19	NA	130159716	130210362	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr11_+_130160061_130188113_130188274_130188529_130188658_130188868_130188940_130189738_130189897_130190112_130190149_130190453_130190695_130194148_130194289_130194639_130194738_130196338_130196449_130196569_130196701_130197840_130197946_130198307_130198419_130198507_130198622_130198946_130199070_130199950_130200138_130208409_130208685_130209441
transcript_41227.nnic	chr11	+	3300	18	NIC	ENSG00000149418.11	novel	3305	19	NA	NA	-109	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_13	55.5443648859921	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAAGTTTCTTTTCCTACT	130157176	True	NA	19	True	AGTAAA	-19	NA	130159672	130210362	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_130160061_130188113_130188274_130188529_130188658_130188868_130188940_130189738_130189897_130190112_130190149_130190453_130190695_130194148_130194289_130194639_130194738_130196338_130196449_130196569_130196701_130197840_130197946_130198307_130198419_130198946_130199070_130199950_130200138_130208409_130208685_130209441_130209579_130209661
transcript_41247.known	chr11	-	7399	8	FSM	ENSG00000196323.14	ENST00000357899.9	7399	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	14.2571142284282	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGCTGTTGTTATTTA	-130314647	True	NA	-15	True	AATAAA	-2	NA	130314917	130226676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_130231716_130233307_130233383_130234155_130234274_130236792_130237094_130238443_130238608_130239811_130239897_130260855_130261930_130314374
transcript_41254.known	chr11	-	9315	6	FSM	ENSG00000196323.14	ENST00000525842.5	9315	6	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	15.447977213862	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCCTGCTGTTGTTATTT	-130314416	False	NA	-16	True	AATAAA	-1	NA	130314686	130226677	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_130234274_130237009_130237094_130238443_130238608_130239811_130239897_130260855_130261930_130314374
transcript_41258.known	chr11	-	9755	6	FSM	ENSG00000196323.14	ENST00000527478.6	9755	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	15.447977213862	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGCTGTTGTTATTTA	-130314638	True	NA	-15	True	AATAAA	-2	NA	130314908	130226676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_130234274_130236792_130237094_130238443_130238608_130239811_130239897_130260855_130261930_130314374
transcript_41270.known	chr11	-	2158	2	FSM	ENSG00000196323.14	ENST00000529348.1	2158	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCAAAAAATAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	130261931	130238814	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_130239897_130260855
transcript_41274.nnic	chr11	-	2963	10	NNC	ENSG00000134917.10	novel	3628	9	NA	NA	58	-290	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	21.601325976676	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTATCTGGTTTCCCCGAT	-130428523	False	NA	-4	True	AATGAA	-9	NA	130428551	130405214	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_130406129_130408463_130408640_130408767_130408941_130411416_130411601_130414530_130414833_130416162_130416331_130416939_130417076_130419052_130419293_130427566_130427992_130428306
transcript_41277.known	chr11	-	3628	9	FSM	ENSG00000134917.10	ENST00000257359.7	3628	9	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	8.46223227050641	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTGGTCTGGTCTGATT	-130428581	False	NA	-3	True	ACTAAA	-18	NA	130428609	130404922	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_130406129_130408463_130408640_130408767_130408941_130411416_130411601_130414530_130414833_130416162_130416331_130416939_130417076_130419052_130419293_130427566
transcript_41286.nnic	chr11	-	2142	5	NIC	ENSG00000134917.10	novel	3628	9	NA	NA	348	-290	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	31.2039660940721	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTATCTGGTTTCCCCGAT	-130428233	False	NA	-4	True	AATGAA	-9	NA	130428261	130405214	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_130406129_130408463_130408640_130408767_130408941_130411416_130411601_130427566
transcript_41289.known	chr11	+	6006	8	FSM	ENSG00000166106.4	ENST00000299164.4	6006	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.755928946018454	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGCCTCTGTGACTGC	130448312	True	NA	17	True	AATAAA	-22	NA	130448644	130476645	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_130449931_130461488_130461622_130462086_130462255_130462496_130462781_130469261_130469440_130470919_130471102_130471207_130471384_130473046
transcript_41293.known	chr11	-	15691	11	FSM	ENSG00000120451.11	ENST00000265909.9	15691	11	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_5	13.7568164921976	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGATTCCTAAATTGATT	-130913840	True	NA	-5	True	AGTAAA	-17	NA	130916479	130866249	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_130878555_130879623_130879712_130880621_130880807_130903254_130903385_130905952_130906134_130906624_130906722_130907952_130908084_130910017_130910138_130910269_130910371_130911632_130911772_130914265
transcript_41294.known	chr11	-	1506	11	FSM	ENSG00000120451.11	ENST00000528555.5	1506	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_10	27.5544914669097	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAGTAGAGTTACTCGGC	-130913812	True	NA	NA	False	NA	NA	NA	130916451	130878392	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_130878555_130879623_130879712_130880621_130880807_130903254_130903385_130905952_130906134_130906624_130906722_130907952_130908084_130910017_130910138_130910269_130910371_130911632_130911772_130916279
transcript_41297.known	chr11	-	1565	10	FSM	ENSG00000120451.11	ENST00000533318.5	1565	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	38.0100701406715	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTGGTGAGTAGATCC	-130913805	True	NA	NA	False	NA	NA	NA	130916444	130878195	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_130878555_130879623_130879712_130880621_130880807_130903254_130903385_130905952_130906134_130906624_130906722_130910017_130910138_130910269_130910371_130911632_130911772_130916279
transcript_4130.known	chr1	-	3318	23	FSM	ENSG00000076864.21	ENST00000374761.6	3318	23	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_22	12.8575314777946	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGAGTTGGGCCTGGCTT	-21622230	True	NA	-6	True	AATAAA	-21	NA	21622568	21596220	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_21597265_21597685_21597729_21597960_21598065_21598399_21598503_21599493_21599618_21601683_21601798_21602803_21602914_21606065_21606198_21608212_21608351_21608849_21608937_21609574_21609647_21610119_21610276_21611451_21611582_21611715_21611817_21612025_21612110_21613175_21613230_21613627_21613707_21613985_21614090_21617305_21617492_21617933_21617973_21619024_21619073_21620014_21620051_21622338
transcript_41305.nnic	chr11	+	2657	3	NNC	ENSG00000231698.3	novel	998	2	NA	NA	-38	1621	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	3	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTAGTCTGTGGTACTC	131250214	True	NA	NA	False	AATAAA	-18	NA	131253407	131302744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_131253592_131291592_131291679_131300357
transcript_41306.known	chr11	+	584	2	FSM	ENSG00000231698.3	ENST00000416553.2	998	2	62	352	-24	-352	multi-exon	FALSE	canonical	3	135	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTGTTTTGTTATTT	131250228	True	NA	10	True	NA	NA	NA	131253421	131300771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_131253592_131300357
transcript_41315.known	chr11	+	2583	7	FSM	ENSG00000182667.15	ENST00000427481.6	2583	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	6.12825877028341	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGTGTGGTACCTCATT	NA	False	NA	8	True	ATTAAA	-22	NA	132146274	132336821	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_132146515_132212021_132212148_132307688_132307824_132310111_132310233_132314551_132314704_132330152_132330186_132335045
transcript_41318.known	chr11	+	2550	6	FSM	ENSG00000182667.15	ENST00000539799.5	2550	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	5.86515131944607	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGTGTGGTACCTCATT	NA	False	NA	8	True	ATTAAA	-22	NA	132146274	132336821	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_132146515_132212021_132212148_132307688_132307824_132310111_132310233_132314551_132314704_132335045
transcript_41324.known	chr11	+	3433	1	FSM	ENSG00000279711.1	ENST00000623990.1	3433	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATACTGACAGATGGTAT	133064651	True	NA	NA	False	AATAAA	-26	NA	133064696	133068129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_133064700_133068100
transcript_41327.nnic	chr11	-	2869	7	NNC	ENSG00000080854.16	novel	4050	19	NA	NA	-50	3424	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5.75663867972351	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCTACCATACAAAAGTAGG	-133954471	True	NA	NA	False	CATAAA	-35	NA	133957018	133933982	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_-_133935763_133936052_133936195_133937375_133937494_133937805_133937962_133944219_133944367_133946060_133946259_133956690
transcript_41334.known	chr11	+	3765	9	FSM	ENSG00000166086.13	ENST00000299106.9	3765	9	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_7	17.8518206354422	181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAACCAACGCACATCATCA	134068049	True	NA	NA	False	NA	NA	NA	134069071	134152001	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_134069160_134139850_134139917_134140656_134140771_134144240_134144394_134144791_134144995_134145945_134146046_134148546_134148677_134148763_134148819_134149145
transcript_41340.known	chr11	+	1558	7	FSM	ENSG00000151502.11	ENST00000525095.2	1558	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	84.0312441892895	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCTTTTCTCTGGAGAA	134222716	True	NA	19	True	AAAACA	-18	NA	134224676	134245729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_134224762_134224799_134225346_134234896_134235054_134239990_134240156_134243118_134243295_134244937_134245081_134245443
transcript_41341.known	chr11	+	3661	6	FSM	ENSG00000151502.11	ENST00000281187.10	3661	6	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_5	14.6642422238587	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGTTCTGTGGTCTCTTC	134222710	True	NA	45	True	ATTAAA	-42	NA	134224670	134247788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_134225346_134234896_134235054_134239990_134240156_134243118_134243295_134244937_134245081_134245443
transcript_41352.known	chr11	-	1060	2	FSM	ENSG00000151503.14	ENST00000526422.2	1060	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCATTCTCTCCAGTTT	-134224390	True	NA	-15	True	AATAAA	-30	NA	134224532	134223092	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_134223483_134223862
transcript_41354.known	chr11	-	893	8	FSM	ENSG00000151500.15	ENST00000392595.6	893	8	0	0	0	0	multi-exon	FALSE	canonical	3	1200	junction_1	254.493173798835	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTCTTCTAAAACCACAC	-134238753	False	NA	-18	True	AATAAA	-18	NA	134253248	134248278	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_134248485_134248808_134248960_134249166_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839_134252917_134253226
transcript_41355.known	chr11	-	943	8	FSM	ENSG00000151500.15	ENST00000392594.7	943	8	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_7	510.554160712072	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTCTTCTAAAACCACAC	-134238875	True	NA	-18	True	AATAAA	-18	NA	134253370	134248278	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_134248485_134248808_134248960_134249166_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839_134252917_134253298
transcript_41360.known	chr11	-	835	7	FSM	ENSG00000151500.15	ENST00000352327.5	835	7	0	0	0	0	multi-exon	FALSE	canonical	3	401	junction_1	502.289314594244	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAAGAACTTTTCTTCTA	-134238855	True	NA	23	True	AATAAA	-9	NA	134253350	134248287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_134248485_134249166_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839_134252917_134253226
transcript_41361.nic	chr11	-	803	7	NIC	ENSG00000151500.15	novel	835	7	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	277	junction_6	668.535380930251	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAAGAACTTTTCTTCTA	-134238895	True	NA	23	True	AATAAA	-9	NA	134253390	134248287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_-_134248485_134249166_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839_134252917_134253298
transcript_41365.known	chr11	-	1304	7	FSM	ENSG00000151500.15	ENST00000341541.8	1304	7	0	0	0	0	multi-exon	FALSE	canonical	3	1200	junction_1	248.124296808407	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTTTCTTCTAAAACCA	-134238857	True	NA	-21	True	AATAAA	-15	NA	134253352	134248281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_134248485_134248808_134248960_134249166_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839
transcript_41388.known	chr11	+	2176	11	FSM	ENSG00000151498.12	ENST00000281182.9	2176	11	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_3	42.9745273388783	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGCTCCTTAAATTATTA	134250049	True	NA	39	True	AATAAA	-28	NA	134253567	134265855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_134253710_134256547_134256649_134257087_134257258_134258514_134258625_134259007_134259085_134259607_134259746_134261043_134261180_134261274_134261373_134261737_134261891_134262519_134262623_134264907
transcript_41416.nic	chr11	+	2047	10	NIC	ENSG00000151498.12	novel	2176	11	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_2	131.734113058121	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGCTCCTTAAATTATTA	134250008	True	NA	39	True	AATAAA	-28	NA	134253526	134265855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_134253710_134256547_134256649_134258514_134258625_134259007_134259085_134259607_134259746_134261043_134261180_134261274_134261373_134261737_134261891_134262519_134262623_134264907
transcript_4143.nic	chr1	-	2137	11	ISM	ENSG00000076864.21	ENST00000374761.6	3318	23	-15	14200	-15	2615	5prime_fragment	FALSE	canonical	3	32	junction_10	13.8206367436526	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTTTGCTACATTATTT	-21622245	True	NA	NA	False	ACTAAA	-16	NA	21622583	21610420	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_21611582_21611715_21611817_21612025_21612110_21613175_21613230_21613627_21613707_21613985_21614090_21617305_21617492_21617933_21617973_21619024_21619073_21620014_21620051_21622338
transcript_41437.known	chr11	+	1797	8	FSM	ENSG00000151498.12	ENST00000374752.6	1797	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	160.313086534711	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAGGCTCCTTAAAT	134250042	True	NA	34	True	AATAAA	-23	NA	134253560	134265850	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_134253710_134259007_134259085_134259607_134259746_134261043_134261180_134261274_134261373_134261737_134261891_134262519_134262623_134264907
transcript_41443.known	chr11	+	703	7	FSM	ENSG00000151498.12	ENST00000524547.5	703	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	173.077054131005	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGCCTTGCAGATGCACG	134250098	False	NA	NA	False	NA	NA	NA	134253616	134262527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_134253710_134259007_134259085_134259607_134259746_134261043_134261180_134261274_134261373_134261737_134261891_134262519
transcript_41450.nnic	chr11	+	3335	20	NNC	ENSG00000166105.16	novel	2946	20	NA	NA	-745	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	61.1650507635124	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCCTCCCATACTCAA	134275558	False	NA	14	True	AATAAA	-17	NA	134275633	134319564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_134276408_134277325_134277452_134277699_134277913_134281376_134281446_134282024_134282121_134283736_134283846_134288797_134288891_134292131_134292214_134293144_134293210_134307123_134307209_134309625_134309764_134310570_134310652_134311063_134311171_134312348_134312490_134312815_134312888_134313395_134313475_134313940_134314029_134314329_134314442_134318630_134318748_134318876
transcript_41451.nnic	chr11	+	3738	20	NNC	ENSG00000166105.16	novel	2946	20	NA	NA	-828	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	58.8211053761584	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCCTCCCATACTCAA	134275535	False	NA	14	True	AATAAA	-17	NA	134275550	134319564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_134276764_134277325_134277452_134277699_134277913_134281376_134281446_134282024_134282121_134283736_134283846_134288797_134288891_134292131_134292178_134293144_134293210_134307123_134307209_134309625_134309764_134310570_134310652_134311063_134311171_134312348_134312490_134312815_134312888_134313395_134313475_134313940_134314029_134314329_134314442_134318630_134318748_134318876
transcript_41452.known	chr11	+	2946	20	FSM	ENSG00000166105.16	ENST00000431683.7	2946	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	56.5457185165108	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCCTCCCATACTCAA	134275700	True	NA	14	True	AATAAA	-17	NA	134276378	134319564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_134276764_134277325_134277452_134277699_134277913_134281376_134281446_134282024_134282121_134283736_134283846_134288797_134288891_134292131_134292214_134293144_134293210_134307123_134307209_134309625_134309764_134310570_134310652_134311063_134311171_134312348_134312490_134312815_134312888_134313395_134313475_134313940_134314029_134314329_134314442_134318630_134318748_134318876
transcript_41465.nic	chr11	+	4010	19	NIC	ENSG00000166105.16	novel	2946	20	NA	NA	-502	0	intron_retention	FALSE	canonical	0	0	junction_10	56.6072946047516	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCCTCCCATACTCAA	134275439	False	NA	14	True	AATAAA	-17	NA	134275876	134319564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_134277452_134277699_134277913_134281376_134281446_134282024_134282121_134283736_134283846_134288797_134288891_134292131_134292214_134293144_134293210_134307123_134307209_134309625_134309764_134310570_134310652_134311063_134311171_134312348_134312490_134312815_134312888_134313395_134313475_134313940_134314029_134314329_134314442_134318630_134318748_134318876
transcript_4147.known	chr1	-	4419	27	FSM	ENSG00000090686.16	ENST00000308271.14	4419	27	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_21	30.6594435580612	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAAGTTTTCTCT	-21769724	True	NA	NA	False	NA	NA	NA	21783149	21678297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_21679440_21680807_21680835_21687190_21687240_21689973_21690100_21695065_21695222_21701497_21701603_21703511_21703619_21704261_21704393_21705726_21705838_21706125_21706188_21706466_21706590_21706743_21706869_21715388_21715458_21721035_21721167_21721649_21721765_21723897_21724096_21728569_21728720_21729703_21729833_21736445_21736626_21747066_21747150_21748137_21748272_21751506_21751616_21752526_21752652_21752991_21753120_21756545_21756703_21757662_21757784_21782823
transcript_41484.nnic	chr11	+	3015	16	NNC	ENSG00000166105.16	novel	2946	20	NA	NA	-836	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	53.4795495701134	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCCTCCCATACTCAA	134275527	False	NA	14	True	AATAAA	-17	NA	134275542	134319564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_134276408_134277325_134277452_134277699_134277913_134281376_134281446_134282024_134282121_134283736_134283846_134288797_134288891_134292131_134292214_134293144_134293210_134312348_134312490_134312815_134312888_134313395_134313475_134313940_134314029_134314329_134314442_134318630_134318748_134318876
transcript_41486.nnic	chr11	+	3327	16	NNC	ENSG00000166105.16	novel	2946	20	NA	NA	-828	0	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_9	49.8261867785293	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCCTCCCATACTCAA	134275535	False	NA	14	True	AATAAA	-17	NA	134275550	134319564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_134276764_134277325_134277452_134277699_134277913_134281376_134281446_134282024_134282121_134283736_134283846_134288797_134288891_134292131_134292178_134293144_134293210_134312348_134312490_134312815_134312888_134313395_134313475_134313940_134314029_134314329_134314442_134318630_134318748_134318876
transcript_41487.nic	chr11	+	3363	16	NIC	ENSG00000166105.16	novel	2946	20	NA	NA	-828	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_9	44.9708053445047	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCCTCCCATACTCAA	134275535	False	NA	14	True	AATAAA	-17	NA	134275550	134319564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_134276764_134277325_134277452_134277699_134277913_134281376_134281446_134282024_134282121_134283736_134283846_134288797_134288891_134292131_134292214_134293144_134293210_134312348_134312490_134312815_134312888_134313395_134313475_134313940_134314029_134314329_134314442_134318630_134318748_134318876
transcript_41501.nnic	chr11	+	3338	15	NNC	ENSG00000166105.16	novel	2946	20	NA	NA	-277	0	intron_retention	FALSE	canonical	3	54	junction_8	47.9272940004345	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCCTCCCATACTCAA	134276083	False	NA	14	True	AATAAA	-17	NA	134276101	134319564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_134277452_134277699_134277913_134281376_134281446_134282024_134282121_134283736_134283846_134288797_134288891_134292131_134292178_134293144_134293210_134312348_134312490_134312815_134312888_134313395_134313475_134313940_134314029_134314329_134314442_134318630_134318748_134318876
transcript_41502.nic	chr11	+	2699	15	NIC	ENSG00000166105.16	novel	2946	20	NA	NA	398	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_8	42.0199175319009	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCCTCCCATACTCAA	134276760	True	NA	14	True	AATAAA	-17	NA	134276776	134319564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_134277452_134277699_134277913_134281376_134281446_134282024_134282121_134283736_134283846_134288797_134288891_134292131_134292214_134293144_134293210_134312348_134312490_134312815_134312888_134313395_134313475_134313940_134314029_134314329_134314442_134318630_134318748_134318876
transcript_41524.known	chr11	+	3566	10	FSM	ENSG00000166105.16	ENST00000389887.9	3566	10	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_9	61.8075467844031	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATAGAGTATGCTTCTTAC	134274229	False	NA	2	True	AATAAA	-15	NA	134274244	134305308	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_134276764_134277325_134277452_134277699_134277913_134281376_134281446_134282024_134282121_134283736_134283846_134288797_134288891_134292131_134292214_134293144_134293210_134305114
transcript_41527.nnic	chr11	+	2191	10	NIC	ENSG00000166105.16	novel	2946	20	NA	NA	414	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_8	59.616262591948	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCCTCCCATACTCAA	134276725	True	NA	14	True	AATAAA	-17	NA	134276792	134319564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr11_+_134277452_134277699_134277913_134281376_134281446_134282024_134282121_134283736_134283846_134288797_134288891_134292131_134292214_134293144_134293210_134318630_134318748_134318876
transcript_41532.nnic	chr11	-	4411	2	Genic_Genomic	ENSG00000289399.1	novel	922	1	NA	NA	-564	14377	multi-exon	FALSE	canonical	3	17	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCAGGTTTAAAGGCCTGT	-134276753	False	NA	NA	False	AAAAAG	-6	NA	134276765	134260902	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Genic_Genomic_chr11_-_134263733_134275184
transcript_41544.nnic	chr11	+	3233	20	NNC	ENSG00000149328.15	novel	3251	19	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_19	27.0850716822614	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCTCTGGTGATAGTCTC	NA	False	NA	29	True	AGTAAA	-20	NA	134331872	134376324	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_134332148_134342753_134342952_134344386_134344456_134345033_134345130_134347324_134347434_134356300_134356394_134359059_134359142_134364327_134364399_134367256_134367342_134368643_134368782_134369804_134369886_134370292_134370400_134371007_134371149_134371420_134371493_134371751_134371831_134373720_134373809_134374144_134374257_134374601_134374719_134374971_134375745_134375877
transcript_41546.nnic	chr11	+	3224	20	NNC	ENSG00000149328.15	novel	3251	19	NA	NA	-1	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_19	27.0850716822614	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCCTCTGGTGATAGTCT	NA	False	NA	28	True	AGTAAA	-19	NA	134331872	134376323	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr11_+_134332148_134342753_134342952_134344386_134344456_134345033_134345130_134347324_134347434_134356300_134356394_134359059_134359142_134364327_134364399_134367256_134367342_134368643_134368782_134369804_134369886_134370292_134370400_134371007_134371149_134371420_134371493_134371751_134371831_134373720_134373809_134374144_134374257_134374601_134374719_134374971_134375786_134375926
transcript_41556.known	chr11	-	3522	7	FSM	ENSG00000109956.13	ENST00000392580.5	3522	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	0.942809041582063	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTCTTCAGCCCTGCCT	-134411907	False	NA	-12	True	ATTAAA	-27	NA	134411918	134378505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_134380748_134381923_134382025_134382709_134383007_134383679_134384189_134387547_134387695_134387826_134387941_134411806
transcript_41558.known	chr11	-	3976	6	FSM	ENSG00000109956.13	ENST00000312527.9	3976	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.01980390271856	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATCCTCTTCAGCCCTGC	-134412106	True	NA	-14	True	ATTAAA	-25	NA	134412242	134378507	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_-_134380748_134381923_134382025_134382709_134383007_134383679_134384189_134387547_134387941_134411806
transcript_41559.known	chr11	+	864	3	FSM	ENSG00000255545.8	ENST00000657630.1	864	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGGAGTGAAACGCGCA	134412187	True	NA	NA	False	ATTAAA	-16	NA	134412283	134439007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr11_+_134412339_134436482_134436785_134438500
transcript_41577.known	chr12	+	2701	13	FSM	ENSG00000120645.12	ENST00000382841.2	2701	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.96074487943871	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTGTTCCAGCGCCTA	NA	False	NA	NA	False	ATTAAA	-22	NA	77375	171330	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_77713_99145_99215_138266_139355_141123_141286_157024_157148_157527_157695_161925_162066_163493_163620_165433_165534_165728_165891_169012_169106_171111_171162_171246
transcript_41581.nic	chr12	-	5187	27	ISM	ENSG00000073614.13	ENST00000399788.7	10701	28	-267	12877	-267	-7478	5prime_fragment	FALSE	canonical	2	40	junction_23	8.6623889458117	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGAGAAGGCTGCTGCAG	-389206	True	NA	19	True	AATAAA	-42	NA	389587	292933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_293170_295572_295794_297040_297201_306945_307090_307453_308006_309802_309965_310884_311065_313055_313195_318105_318462_320994_321110_322416_322568_323081_323207_323599_323782_328834_329030_331818_331939_333486_333650_334240_334423_350620_350780_352204_352325_354075_354235_355157_355250_356431_356538_362962_363098_365933_366105_384030_384154_385896_385975_388926
transcript_41585.nic	chr12	-	3786	22	ISM	ENSG00000073614.13	ENST00000399788.7	10701	28	-267	29834	-267	0	5prime_fragment	FALSE	canonical	3	40	junction_18	8.70321961954493	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAGAAAAAGAAAAGG	-389206	True	NA	NA	False	AGTAAA	-10	NA	389587	309890	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_309965_310884_311065_313055_313195_318105_318462_320994_321110_322416_322568_323081_323207_323599_323782_328834_329030_331818_331939_333486_333650_334240_334423_350620_350780_352204_352325_354075_354235_355157_355250_356431_356538_362962_363098_365933_366105_384030_384154_385896_385975_388926
transcript_41589.known	chr12	-	575	4	FSM	ENSG00000073614.13	ENST00000543507.1	575	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	19.6694913225759	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGCTCATACTGGTTTA	-387868	True	NA	NA	False	NA	NA	NA	389273	384030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_384154_385896_385975_387247_387275_388926
transcript_41591.known	chr12	+	2300	13	FSM	ENSG00000120647.10	ENST00000239830.9	2300	13	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_3	34.5265598247687	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTCTTTGAGTTTTCTG	398831	True	NA	15	True	AATAAA	-16	NA	401643	442642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_401685_405510_405565_409367_409422_411746_411979_418493_418637_428768_428866_430663_430737_431865_431955_433173_433323_438334_438555_440616_440743_440843_440997_441773
transcript_41594.known	chr12	+	2253	12	FSM	ENSG00000120647.10	ENST00000412006.6	2253	12	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_2	27.0860276261024	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTCTTTGAGTTTTCTG	398824	True	NA	15	True	AATAAA	-16	NA	401636	442642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_401685_405510_405565_411746_411979_418493_418637_428768_428866_430663_430737_431865_431955_433173_433323_438334_438555_440616_440743_440843_440997_441773
transcript_41595.known	chr12	+	1652	11	FSM	ENSG00000120647.10	ENST00000540180.5	1652	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	49.3806642320656	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTGAGTTGACTAGAGT	389243	True	NA	NA	False	NA	NA	NA	389347	442004	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_389487_411746_411979_418493_418637_428768_428866_430663_430737_431865_431955_433173_433323_438334_438555_440616_440743_440843_440997_441773
transcript_41604.known	chr12	-	670	4	FSM	ENSG00000171840.13	ENST00000542920.1	670	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCTCCCTACCCACAGCA	NA	False	NA	NA	False	NA	NA	NA	643665	564580	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_564682_565216_565402_565949_566179_643510
transcript_41608.nic	chr12	+	2791	7	ISM	ENSG00000060237.19	ENST00000535572.5	9886	26	-75	50165	-61	0	5prime_fragment	FALSE	canonical	3	31	junction_2	5.19615242270663	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGCAGGAAGAGAGCAG	NA	False	NA	NA	False	AAGAAA	-3	NA	752517	861135	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_754325_813641_813815_827041_827263_830002_830161_857160_857250_859244_859465_861012
transcript_41612.nic	chr12	+	2569	6	ISM	ENSG00000060237.19	ENST00000535572.5	9886	26	-75	51935	-61	-1770	5prime_fragment	FALSE	canonical	3	31	junction_2	4.12795348811006	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATATTAAGAAATTAAAGGG	NA	False	NA	NA	False	CATAAA	-20	NA	752517	859365	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_754325_813641_813815_827041_827263_830002_830161_857160_857250_859244
transcript_41616.nic	chr12	+	2440	5	ISM	ENSG00000060237.19	ENST00000535572.5	9886	26	-75	54059	-61	-3894	5prime_fragment	FALSE	canonical	3	31	junction_2	3.90512483795333	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAAAGGTAAGTTGCCTC	NA	False	NA	NA	False	AAAACA	-3	NA	752517	857241	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_754325_813641_813815_827041_827263_830002_830161_857160
transcript_41618.known	chr12	+	1902	3	FSM	ENSG00000060237.19	ENST00000447667.2	1902	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAATGTAATAGCCTTTTT	753019	False	NA	NA	False	AATAAA	-20	NA	753055	827501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_754325_813641_813815_827041
transcript_4162.nic	chr1	-	2564	14	ISM	ENSG00000090686.16	ENST00000400301.5	4309	26	-432	42738	-21	0	5prime_fragment	FALSE	canonical	3	194	junction_8	30.1027825091452	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACACTTTAAACCTATGT	-21783566	True	NA	NA	False	AATAAA	-2	NA	21783627	21721035	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_21721167_21721649_21721765_21723897_21724096_21728569_21728720_21729703_21729833_21736445_21736626_21747066_21747150_21748137_21748272_21751506_21751616_21752526_21752652_21752991_21753120_21756545_21756703_21757662_21757784_21782823
transcript_41625.known	chr12	+	9308	19	FSM	ENSG00000082805.21	ENST00000360905.9	9308	19	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	16.6199344830905	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGTGTCCTTCTTTGAG	987758	True	NA	18	True	TATAAA	-15	NA	991222	1495931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_991323_1027747_1028573_1083163_1083581_1104749_1104825_1110191_1110348_1112214_1112299_1115865_1116034_1141619_1141788_1180539_1180678_1181924_1182066_1183280_1183422_1189858_1190053_1236768_1236905_1263033_1263166_1289851_1290013_1371832_1371978_1408148_1408248_1444561_1444751_1490092
transcript_41632.known	chr12	+	9241	18	FSM	ENSG00000082805.21	ENST00000543086.7	9241	18	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	19.8182049054585	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTCCTTCTTTGAGTG	991195	False	NA	20	True	TATAAA	-17	NA	991207	1495933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_991323_1027747_1028573_1083163_1083581_1104749_1104825_1110191_1110348_1115865_1116034_1141619_1141788_1180539_1180678_1181924_1182066_1183280_1183422_1189858_1190053_1236768_1236905_1263033_1263166_1289851_1290013_1371832_1371978_1408148_1408248_1444561_1444751_1490092
transcript_41642.nic	chr12	+	2362	10	ISM	ENSG00000082805.21	ENST00000397203.7	7033	19	-34	311535	6	-24	5prime_fragment	FALSE	canonical	3	36	junction_1	22	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAATTGATAACTACAA	991201	False	NA	7	True	NA	NA	NA	991213	1181981	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_991488_1027747_1028573_1083163_1083581_1104749_1104825_1110191_1110348_1112214_1112299_1115865_1116034_1141619_1141788_1180539_1180678_1181924
transcript_41663.known	chr12	-	3023	12	FSM	ENSG00000002016.18	ENST00000358495.8	3023	12	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_11	7.1072073766153	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATTTAATAATTTTTTTA	-948707	True	NA	NA	False	AGTAAA	-38	NA	949694	911735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_913453_913893_914122_914430_914533_916343_916484_916638_916821_925449_925526_927144_927264_929818_929887_930050_930145_931219_931322_932974_933077_949601
transcript_41669.known	chr12	-	501	3	FSM	ENSG00000250132.6	ENST00000539259.1	501	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAATAAACTGCTTGTAC	-991083	True	NA	-23	True	NA	NA	NA	991190	976978	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_977107_989808_990042_991050
transcript_41670.known	chr12	+	2238	5	FSM	ENSG00000111186.13	ENST00000397196.7	2238	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	6.80073525436772	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGCTCCCTTTCCTTA	1629217	True	NA	6	True	ATTAAA	-14	NA	1629230	1647212	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_1629372_1631297_1631435_1632657_1632906_1639683_1639977_1645793
transcript_41671.nnic	chr12	+	2413	5	NNC	ENSG00000111186.13	novel	1304	4	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	6.80073525436772	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGCTCCCTTTCCTTA	1629864	False	NA	6	True	ATTAAA	-14	NA	1629877	1647212	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_1630194_1631297_1631435_1632657_1632906_1639683_1639977_1645793
transcript_41672.nic	chr12	+	2379	5	NIC	ENSG00000111186.13	novel	1304	4	NA	NA	48	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_4	3.53553390593274	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGCTCCCTTTCCTTA	1629829	True	NA	6	True	ATTAAA	-14	NA	1629944	1647212	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_1630227_1631297_1631435_1632657_1632906_1639683_1639977_1645793
transcript_41676.known	chr12	-	2527	2	FSM	ENSG00000171823.7	ENST00000339235.4	2527	2	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGGTTTTTTGTTGTTGT	-1594169	True	NA	1	True	AATATA	-25	NA	1594581	1565992	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_1566811_1592872
transcript_41677.known	chr12	-	300	2	FSM	ENSG00000171823.7	ENST00000543278.1	300	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCTGCCTGCTATTTAT	-1592735	False	NA	NA	False	AATAAA	-16	NA	1593038	1587360	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_1587537_1592914
transcript_41680.known	chr12	+	3971	8	FSM	ENSG00000006831.10	ENST00000357103.5	3971	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	22.4871845589383	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGACCTGTCGTGTGTTTT	1688852	True	NA	NA	False	AATAAA	-16	NA	1691069	1788674	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_1691192_1754257_1754515_1772841_1772962_1777853_1778026_1780450_1780638_1780888_1781077_1783879_1784074_1785943
transcript_41682.nnic	chr12	+	4059	8	NIC	ENSG00000006831.10	novel	3971	8	NA	NA	-66	0	combination_of_known_splicesites	FALSE	canonical	3	49	junction_1	13.5058566283411	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGACCTGTCGTGTGTTTT	1688786	True	NA	NA	False	AATAAA	-16	NA	1691003	1788674	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_1691214_1754257_1754515_1772841_1772962_1777853_1778026_1780450_1780638_1780888_1781077_1783879_1784074_1785943
transcript_41691.known	chr12	+	1452	3	FSM	ENSG00000151067.23	ENST00000673589.2	1452	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCAGGATGCCTCTGCAA	2053247	True	NA	NA	False	NA	NA	NA	2053284	2121127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_2053612_2115223_2115546_2120324
transcript_41699.known	chr12	-	2033	9	FSM	ENSG00000151065.14	ENST00000280665.11	2033	9	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_3	23.5687160235767	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTGTTTTTTAATTAT	-2000712	True	NA	-3	True	AGTAAA	-23	NA	2004457	1946052	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_1946287_1949085_1949335_1952415_1953289_1955431_1955561_1965557_1965694_1967843_1967911_1993263_1993392_1997934_1997976_2004281
transcript_41703.known	chr12	-	2231	3	FSM	ENSG00000151065.14	ENST00000535873.2	2231	3	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_2	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTCTTTGTATTTTTT	-2000790	True	NA	NA	False	AATAAA	-18	NA	2004535	1991455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_1993392_1997934_1997976_2004281
transcript_41707.known	chr12	-	598	6	FSM	ENSG00000151065.14	ENST00000537725.1	598	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	90.5560599849618	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCAGTACAGGAACCCTT	-2000682	True	NA	NA	False	NA	NA	NA	2004427	1961315	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_1961396_1965557_1965694_1967843_1967911_1993263_1993392_1997934_1997976_2004281
transcript_4172.known	chr1	-	2818	11	FSM	ENSG00000090686.16	ENST00000421625.6	2818	11	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_5	28.1291663580704	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTACTTGTGGTTTGTCTT	-21783545	True	NA	-5	True	AATAAA	-14	NA	21783606	21727850	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_21728720_21729703_21729833_21736445_21736626_21747066_21747150_21748137_21748272_21751506_21751616_21752526_21752652_21752991_21753120_21756545_21756703_21757662_21757784_21782823
transcript_41726.known	chr12	+	1935	13	FSM	ENSG00000111203.13	ENST00000540929.5	1935	13	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_4	42.7482130880604	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTCCCTCCCTCTCCCA	2810925	True	NA	NA	False	NA	NA	NA	2812692	2830604	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_2812857_2817222_2817319_2817908_2817951_2818105_2818354_2820085_2820226_2820723_2820873_2821261_2821360_2821542_2821597_2821691_2821793_2822793_2822912_2823769_2823944_2824089_2824253_2830216
transcript_41730.known	chr12	+	2320	12	FSM	ENSG00000111203.13	ENST00000228799.7	2320	12	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_11	18.9688740261034	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCTCTCAGTGTAGGTA	2810900	True	NA	18	True	AATAAA	-24	NA	2812667	2825076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_2812857_2817222_2817319_2817908_2817951_2818105_2818278_2820085_2820226_2820723_2820873_2821261_2821360_2821542_2821597_2821691_2821793_2822793_2822912_2823769_2823944_2824089
transcript_4174.nic	chr1	-	1339	9	ISM	ENSG00000090686.16	ENST00000421625.6	2818	11	426	8650	15	-7889	5prime_fragment	FALSE	canonical	3	194	junction_3	30.5941170815567	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACATAGAAAAGATGGAGGG	-21783119	False	NA	-7	True	NA	NA	NA	21783180	21736500	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_21736626_21747066_21747150_21748137_21748272_21751506_21751616_21752526_21752652_21752991_21753120_21756545_21756703_21757662_21757784_21782823
transcript_41743.known	chr12	+	1951	12	FSM	ENSG00000078246.17	ENST00000397132.6	1951	12	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_11	35.2968521060312	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAAATGTGTCACTGCC	2887387	True	NA	93	True	AATAAA	-11	NA	2890906	2941130	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_2890989_2909528_2909581_2920762_2920923_2922261_2922403_2930247_2930346_2931036_2931241_2933417_2933531_2934446_2934562_2937630_2937730_2938113_2938286_2939310_2939425_2940529
transcript_41748.known	chr12	+	3080	11	FSM	ENSG00000078246.17	ENST00000448120.7	3080	11	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_8	13.7477270848675	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCACTGCCTTTGCAAG	2887371	True	NA	101	True	AATAAA	-19	NA	2890890	2941138	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_2890989_2909528_2909581_2920762_2920923_2922261_2922403_2930247_2930346_2931036_2931241_2933417_2933531_2934446_2934562_2937630_2937730_2938113_2938286_2939310
transcript_41752.known	chr12	+	3715	10	FSM	ENSG00000004478.8	ENST00000001008.6	3715	10	0	0	0	0	multi-exon	FALSE	canonical	3	1768	junction_3	72.1194140058224	182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTACAAGTCTTTCAGCC	2767575	True	NA	18	True	ATTAAA	-29	NA	2794969	2805423	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_2795245_2797137_2797283_2797728_2797872_2798705_2798827_2799087_2799245_2799849_2799941_2800038_2800123_2800391_2800578_2801116_2801357_2803150
transcript_41768.known	chr12	-	3475	10	FSM	ENSG00000111206.13	ENST00000342628.6	3475	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	137.983896000785	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGGCTCTGTGGTTTAT	-2876974	False	NA	-8	True	AATAAA	-15	NA	2876986	2857682	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_2859664_2861298_2861413_2864319_2864496_2864682_2864753_2865354_2865400_2866392_2866522_2868562_2868755_2872095_2872248_2873976_2874526_2876919
transcript_41777.known	chr12	-	3552	9	FSM	ENSG00000111206.13	ENST00000359843.8	3552	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	124.211450257213	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTCTGTGGTTTATTGG	-2877162	False	NA	-5	True	AATAAA	-18	NA	2877174	2857679	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_2859664_2864319_2864496_2864682_2864753_2865354_2865400_2866392_2866522_2868562_2868755_2872095_2872248_2873976_2874526_2876919
transcript_4178.known	chr1	-	443	2	FSM	ENSG00000090686.16	ENST00000489108.1	443	2	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGTAAGCCTTTAAATAATA	-21782882	False	NA	NA	False	TTTAAA	-19	NA	21782943	21757460	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_21757784_21782823
transcript_41784.known	chr12	-	3487	8	FSM	ENSG00000111206.13	ENST00000627656.2	3487	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	111.581762828512	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTCTGTGGTTTATTG	-2872091	True	NA	-6	True	AATAAA	-17	NA	2877155	2857680	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_2859664_2864319_2864496_2864682_2864756_2866392_2866522_2868562_2868755_2872095_2872245_2873976_2874526_2876919
transcript_41785.known	chr12	-	3370	8	FSM	ENSG00000111206.13	ENST00000361953.7	3370	8	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_6	47.8014601433548	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGGCTCTGTGGTTTAT	-2871976	True	NA	-8	True	AATAAA	-15	NA	2877040	2857682	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_2859664_2864319_2864496_2864682_2864753_2866392_2866522_2868562_2868755_2872095_2872248_2873976_2874526_2876919
transcript_418.nnic	chr1	-	2383	7	NNC	ENSG00000078808.19	novel	2137	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_6	214.162710728704	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCTTTTTTGGTCAGC	-1225976	True	NA	15	True	TTTAAA	-4	NA	1232067	1216931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_1217689_1218457_1218634_1218768_1218928_1223243_1223358_1223831_1223969_1228467_1228947_1231506
transcript_41803.known	chr12	+	587	4	FSM	ENSG00000111203.13	ENST00000541659.1	587	4	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_3	2.62466929133727	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAAATTGCTGCCCTCCT	2810993	True	NA	NA	False	AATAAA	-4	NA	2812760	2818458	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_2812857_2817222_2817319_2817908_2817951_2818105
transcript_41808.known	chr12	+	1926	3	FSM	ENSG00000171792.11	ENST00000489288.7	1926	3	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_1	32.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCTGGACCTACTGTGT	2871401	True	NA	6	True	ATTAAA	-20	NA	2877222	2889524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_2877283_2885282_2885535_2887910
transcript_4181.nic	chr1	-	2818	22	NIC	ENSG00000142798.20	novel	865	7	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	7.22366983573388	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	-21935457	True	NA	NA	False	NA	NA	NA	21937324	21877513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_21877540_21878185_21878254_21878432_21878492_21878576_21878664_21878993_21879122_21880106_21880255_21880362_21880560_21880655_21880836_21881338_21881503_21884527_21884675_21884766_21884919_21885012_21885158_21885319_21885452_21887214_21887335_21887419_21887675_21887937_21888067_21889980_21890142_21890426_21890486_21890584_21890695_21895921_21895967_21896174_21896311_21937154
transcript_41811.known	chr12	+	583	3	FSM	ENSG00000171792.11	ENST00000538636.5	583	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	203	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCCCCAAAGCTGTGGGA	2871377	True	NA	NA	False	NA	NA	NA	2877198	2888137	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_2877283_2885262_2885535_2887910
transcript_41812.known	chr12	+	1605	2	FSM	ENSG00000171792.11	ENST00000464682.2	1605	2	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGACTTCCCCAGTCAA	2871386	True	NA	-9	True	NA	NA	NA	2877207	2889440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_2877283_2887910
transcript_41815.known	chr12	-	442	2	FSM	ENSG00000258325.2	ENST00000547794.2	442	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGGTTGCAAGGATTCAG	-2812700	False	NA	-14	True	ATTAAA	-18	NA	2812816	2805130	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_2805318_2812561
transcript_41816.known	chr12	+	1008	1	FSM	ENSG00000171792.11	ENST00000623153.1	1008	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACTAATGGTCTTTGTTT	2887987	False	NA	11	True	AATACA	-15	NA	2888000	2889008	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_2888000_2889000
transcript_41821.known	chr12	+	1710	13	FSM	ENSG00000197905.10	ENST00000359864.8	1710	13	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_2	41.047651847849	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCTGGCTGTGTGAGC	2953886	True	NA	25	True	AATAAA	-28	NA	2959396	3040676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_2959482_2959947_2960041_2994737_2994993_3011003_3011069_3012169_3012233_3017397_3017527_3018544_3018589_3019114_3019171_3020633_3020774_3021843_3022018_3037967_3038109_3040106_3040260_3040364
transcript_41825.nic	chr12	+	2138	13	NIC	ENSG00000197905.10	novel	1710	13	NA	NA	-59	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	87.4755521401393	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAGAGGACCTGGTCTG	2959259	False	NA	14	True	AATAAA	-17	NA	2959270	3040665	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_2959482_2959947_2960354_2994737_2994993_3011003_3011069_3012169_3012233_3017397_3017527_3018544_3018589_3019114_3019171_3020633_3020774_3021843_3022018_3037967_3038109_3040106_3040260_3040364
transcript_41828.known	chr12	+	1637	12	FSM	ENSG00000197905.10	ENST00000358409.7	1637	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	92.1415547714628	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAGAGGACCTGGTCTG	2953819	True	NA	14	True	AATAAA	-17	NA	2959329	3040665	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_2959482_2959947_2960041_2994737_2994993_3011003_3011069_3012169_3012233_3018544_3018589_3019114_3019171_3020633_3020774_3021843_3022018_3037967_3038109_3040106_3040260_3040364
transcript_41830.nic	chr12	+	1570	12	NIC	ENSG00000197905.10	novel	1710	13	NA	NA	-59	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_2	91.7362370608401	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAGAGGACCTGGTCTG	2959259	False	NA	14	True	AATAAA	-17	NA	2959270	3040665	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_2959482_2959947_2960041_3011003_3011069_3012169_3012233_3017397_3017527_3018544_3018589_3019114_3019171_3020633_3020774_3021843_3022018_3037967_3038109_3040106_3040260_3040364
transcript_41833.nnic	chr12	+	1690	12	NIC	ENSG00000197905.10	novel	1710	13	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	89.6765537781234	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAGAGGACCTGGTCTG	2953802	True	NA	14	True	AATAAA	-17	NA	2959312	3040665	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_2959482_2994737_2994993_3011003_3011069_3012169_3012233_3017397_3017527_3018544_3018589_3019114_3019171_3020633_3020774_3021843_3022018_3037967_3038109_3040106_3040260_3040364
transcript_4184.nic	chr1	-	2202	6	ISM	ENSG00000142798.20	ENST00000374695.8	14341	97	-14	66216	-14	-1225	5prime_fragment	FALSE	canonical	3	19	junction_4	2.1540659228538	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAAAGGATGGAGAGG	-21935457	True	NA	NA	False	AATAAA	-19	NA	21937324	21888459	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_21890142_21890426_21890486_21890584_21890695_21895921_21895967_21896174_21896311_21937154
transcript_41842.known	chr12	+	3514	1	FSM	ENSG00000250899.3	ENST00000513358.3	3514	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	3041408	False	NA	NA	False	NA	NA	NA	3041436	3044950	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_3041400_3045000
transcript_41845.known	chr12	+	4322	9	FSM	ENSG00000011105.14	ENST00000011898.10	4322	9	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	5.1234753829798	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGCTGTCTCTCAGTG	3073724	True	NA	13	True	AATAAA	-23	NA	3077378	3286559	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_3077454_3083652_3083720_3201176_3201257_3278420_3278613_3278991_3279067_3280381_3280484_3281197_3281330_3281733_3281818_3283044
transcript_41847.known	chr12	+	4284	8	FSM	ENSG00000011105.14	ENST00000537971.5	4284	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	11.3101002359368	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTCTCTCAGTGGTGTG	3073700	True	NA	18	True	AATAAA	-28	NA	3077354	3286564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_3077454_3201176_3201257_3278420_3278613_3278991_3279067_3280381_3280484_3281197_3281330_3281733_3281818_3283044
transcript_4185.known	chr1	-	3586	11	FSM	ENSG00000142798.20	ENST00000486901.1	3586	11	0	0	0	0	multi-exon	TRUE	canonical	3	177	junction_10	26.4327448442268	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGGCCTCCTGAGTCTTTG	-21830699	False	NA	-12	True	AATAAA	-17	NA	21830713	21822244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_21823489_21823615_21823720_21824120_21824205_21824305_21824377_21824536_21824616_21824703_21824780_21827862_21827920_21828029_21828153_21828254_21828427_21828834_21829080_21829382
transcript_41850.known	chr12	-	255	1	FSM	ENSG00000227081.5	ENST00000495392.1	255	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCACTCTGAGTCAAGATG	-3211907	False	NA	NA	False	NA	NA	NA	3211917	3211662	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_3211700_3211900
transcript_41855.known	chr12	+	2399	10	FSM	ENSG00000111218.12	ENST00000382622.4	2399	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	2.55796987404919	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGGGATGGCTGGTTCC	3491096	True	NA	NA	False	AATAAA	-17	NA	3491202	3593973	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_3491701_3540605_3540792_3549935_3550092_3553650_3553715_3568705_3568849_3569476_3569565_3576870_3576987_3583057_3583209_3592230_3592353_3593098
transcript_41863.nic	chr12	+	690	2	ISM	ENSG00000256969.2	ENST00000669712.1	903	4	5985	0	-2090	0	3prime_fragment	FALSE	canonical	3	22	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCCACGCCTAGATTGTA	4017665	True	NA	38	True	AATAAA	-19	NA	4018886	4026658	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_4019140_4026221
transcript_41865.nic	chr12	+	1051	2	ISM	ENSG00000118971.9	ENST00000536537.2	1062	4	0	21387	0	-8895	5prime_fragment	FALSE	canonical	3	1039	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCTGAGAACGTGTTCAC	4259055	True	NA	7	True	ATTAAA	-18	NA	4273761	4276581	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_4274236_4276004
transcript_41866.nnic	chr12	+	2624	5	NNC	ENSG00000118971.9	novel	6493	5	NA	NA	0	1776	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	428.036505452514	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGATACCTCATTTCTATA	4259055	True	NA	3	True	TATAAA	-18	NA	4273761	4290937	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_4274236_4276004_4276221_4278759_4278920_4288841_4288991_4289312
transcript_41867.known	chr12	+	6493	5	FSM	ENSG00000118971.9	ENST00000261254.8	6493	5	0	0	0	0	multi-exon	FALSE	canonical	3	958	junction_3	47.7827113085894	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTGGCCGTTTTTGACT	4259055	True	NA	16	True	AATAAA	-17	NA	4273761	4305353	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_4274236_4276004_4276221_4278759_4278920_4288841_4288991_4299859
transcript_4187.known	chr1	+	10503	6	FSM	ENSG00000070831.17	ENST00000656825.1	10503	6	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_1	57.2293630927341	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTGGTTTGTGTCTTTT	22009341	True	NA	NA	False	AATAAA	-15	NA	22052708	22101360	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_22052743_22078428_22078584_22081721_22081795_22086438_22086549_22086668_22086867_22091427
transcript_41871.nic	chr12	+	2946	4	ISM	ENSG00000118971.9	ENST00000261254.8	6493	5	0	14416	0	1776	5prime_fragment	FALSE	canonical	3	958	junction_3	35.1852241715184	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGATACCTCATTTCTATA	4259055	True	NA	3	True	TATAAA	-18	NA	4273761	4290937	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_4274236_4276004_4276221_4278759_4278920_4288841
transcript_41874.known	chr12	-	621	2	FSM	ENSG00000255920.4	ENST00000663068.1	621	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTATTTATTTATTTTT	-4276227	True	NA	-6	True	AATAAA	-15	NA	4276252	4248766	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_4249194_4276058
transcript_41876.known	chr12	+	8209	6	FSM	ENSG00000078237.7	ENST00000179259.6	8209	6	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_5	12.0266371026983	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCATCTTTTTATTTT	4318341	True	NA	NA	False	ATTAAA	-19	NA	4321212	4360028	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_4321304_4331279_4331318_4337038_4337161_4349818_4349897_4351266_4351378_4352259
transcript_41880.known	chr12	-	2168	14	FSM	ENSG00000047621.12	ENST00000545746.5	2168	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_13	20.0056205120213	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCTTTTACTTTCTTTG	-4537574	True	NA	-63	True	ATTAAA	-14	NA	4538508	4489414	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_4489900_4490521_4490590_4491176_4491235_4500137_4500341_4505305_4505381_4517060_4517190_4518057_4518256_4518773_4518881_4525253_4525376_4525483_4525584_4529868_4530051_4534156_4534303_4536016_4536212_4538408
transcript_41886.known	chr12	+	2163	10	FSM	ENSG00000111247.15	ENST00000228843.13	2163	10	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	151.242263346666	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTTGTACACTTCTTT	4532873	True	NA	19	True	ATTAAA	-16	NA	4538889	4560047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_4538957_4541883_4541934_4543762_4543905_4545781_4545833_4546308_4546419_4548091_4548179_4548686_4548837_4552982_4553148_4556352_4556503_4558856
transcript_41888.known	chr12	+	2112	9	FSM	ENSG00000111247.15	ENST00000352618.9	2112	9	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_7	50.6802168010359	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTTGTACACTTCTTT	4532873	True	NA	19	True	ATTAAA	-16	NA	4538889	4560047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_4538957_4541883_4541934_4543762_4543905_4546308_4546419_4548091_4548179_4548686_4548837_4552982_4553148_4556352_4556503_4558856
transcript_41892.nic	chr12	+	718	7	ISM	ENSG00000111247.15	ENST00000544927.5	787	8	-95	5931	-34	0	5prime_fragment	FALSE	canonical	3	349	junction_3	41.7133072292284	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTCTATGAGAAAAAGTAAA	4532818	True	NA	-37	True	NA	NA	NA	4538834	4553039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_4538957_4541883_4541934_4543762_4543905_4546308_4546419_4548091_4548179_4548686_4548837_4552982
transcript_41893.nic	chr12	+	792	7	ISM	ENSG00000111247.15	ENST00000544927.5	787	8	-95	5857	-34	74	5prime_fragment	FALSE	canonical	3	349	junction_3	41.7133072292284	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGAAATCTAAATCCAA	4532818	True	NA	37	True	ATTAAA	-40	NA	4538834	4553113	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_4538957_4541883_4541934_4543762_4543905_4546308_4546419_4548091_4548179_4548686_4548837_4552982
transcript_41896.known	chr12	+	567	6	FSM	ENSG00000111247.15	ENST00000544110.5	567	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	172.841661644408	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTCTATGAGAAAAAGTAAA	4532866	True	NA	-37	True	NA	NA	NA	4538882	4553039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_4538957_4541883_4541934_4543762_4543912_4548091_4548179_4548686_4548837_4552982
transcript_41897.known	chr12	+	707	6	FSM	ENSG00000111247.15	ENST00000536346.5	707	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	171.202336432655	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTTATTCTACTTCGAA	4532781	True	NA	NA	False	NA	NA	NA	4538797	4548838	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_4538957_4541883_4541934_4543762_4543912_4546308_4546419_4548091_4548179_4548686
transcript_419.known	chr1	-	1933	7	FSM	ENSG00000078808.19	ENST00000360001.12	1933	7	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_6	76.3094940940437	3716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTTTTTGGTCAGCT	-1225910	True	NA	16	True	AATATA	-1	NA	1232001	1216930	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1217689_1218457_1218634_1218768_1218928_1223243_1223358_1223831_1223969_1228467_1228947_1231891
transcript_4191.known	chr1	+	1077	2	FSM	ENSG00000218510.9	ENST00000416769.2	1077	2	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCTGTGGTGATTAAT	22024236	True	NA	NA	False	AATAAA	-1	NA	22025510	22031223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_22025644_22030279
transcript_41910.known	chr12	+	3317	15	FSM	ENSG00000255639.3	ENST00000648836.1	3317	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_14	510.652548716056	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCTTATACATAAGGCAAA	4634948	True	NA	NA	False	ATTAAA	-45	NA	4649100	4774184	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_4649176_4654291_4654463_4654824_4654923_4657747_4657840_4659035_4659178_4662532_4662636_4668456_4668525_4669740_4669818_4682204_4682301_4685258_4685326_4760957_4761144_4763252_4763391_4763951_4764048_4765378_4765547_4772444
transcript_41914.known	chr12	+	8356	11	FSM	ENSG00000139180.11	ENST00000266544.10	8356	11	0	0	0	0	multi-exon	FALSE	canonical	3	1014	junction_1	39.8968670449197	563	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTTGAGAGCTGCAATT	4634961	True	NA	NA	False	AATAAA	-28	NA	4649113	4694317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_4649176_4654291_4654463_4654824_4654923_4657747_4657840_4659035_4659178_4662532_4662636_4668456_4668525_4669740_4669818_4682204_4682301_4685258_4685326_4686937
transcript_41918.nic	chr12	+	934	4	NIC	ENSG00000010219.14	novel	1840	12	NA	NA	-61	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	19.6015872373189	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCATGACTCCTCTTATG	4604045	True	NA	34	True	CATAAA	-35	NA	4604835	4613888	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_4605087_4610154_4610285_4612542_4612719_4613511
transcript_41919.known	chr12	+	855	4	FSM	ENSG00000010219.14	ENST00000545571.5	855	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	21.483844059096	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAACATGGCCAATTGGC	4604106	True	NA	19	True	CATAAA	-20	NA	4604896	4613873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_4605087_4610154_4610285_4612542_4612719_4613514
transcript_4192.known	chr1	+	1435	6	FSM	ENSG00000070831.17	ENST00000315554.13	1435	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	213.251400933265	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGATGAAGCTTTATTC	22009341	True	NA	NA	False	ATTAAA	-23	NA	22052708	22090807	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_22052743_22078428_22078584_22081721_22081795_22086438_22086549_22086668_22086867_22089942
transcript_41921.known	chr12	+	2910	1	FSM	ENSG00000130037.5	ENST00000252321.5	2910	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTAGTTTTTCTGCAGCT	NA	False	NA	NA	False	AATAAA	-21	NA	5043878	5046788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_5043900_5046800
transcript_41924.known	chr12	+	1341	2	FSM	ENSG00000185652.12	ENST00000423158.4	1341	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGATGTCAGAGTTGTGTA	5431994	True	NA	20	True	AGTAAA	-14	NA	5432107	5495299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_5432343_5494193
transcript_41926.known	chr12	-	3683	25	FSM	ENSG00000047617.17	ENST00000682330.1	3683	25	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_24	2.44629822384762	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCATCTGTTGTCTTTGG	-5945123	True	NA	NA	False	AATAAA	-25	NA	5945259	5562654	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_5563569_5565557_5565664_5575833_5576016_5577954_5578008_5578365_5578519_5599483_5599630_5612655_5612757_5612900_5612959_5615185_5615298_5635151_5635348_5647726_5647802_5732519_5732631_5739316_5739400_5744156_5744318_5750835_5750971_5799506_5799572_5806051_5806094_5807312_5807369_5827768_5827821_5830434_5830490_5832451_5832604_5854042_5854142_5921039_5921367_5922619_5922805_5945195
transcript_41928.known	chr12	+	1272	8	FSM	ENSG00000010278.15	ENST00000642746.1	1272	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	1000.91582552976	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATGACAATGTCCTGGAC	6199498	True	NA	-4	True	AATAAA	-3	NA	6199840	6238247	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6200073_6225425_6225535_6232631_6232730_6233411_6233487_6235228_6235328_6235475_6235566_6236191_6236276_6237762
transcript_4193.known	chr1	-	680	2	FSM	ENSG00000162552.15	ENST00000415567.1	680	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATTTGTCTCCACTGAC	NA	False	NA	NA	False	AGTAAA	-18	NA	22129851	22127037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_22127482_22129615
transcript_41930.known	chr12	+	1225	8	FSM	ENSG00000010278.15	ENST00000009180.10	1225	8	0	0	0	0	multi-exon	FALSE	canonical	3	2517	junction_1	161.502637875721	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTTTTGTTTTGTTTAA	6189024	True	NA	15	True	AATAAA	-22	NA	6200399	6238266	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6200566_6225425_6225535_6232631_6232730_6233411_6233487_6235228_6235328_6235475_6235566_6236191_6236276_6237762
transcript_41939.known	chr12	+	2969	16	FSM	ENSG00000008323.16	ENST00000684764.1	2969	16	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_6	17.6554681488641	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGGTGTGGTGGTGTGCC	6309536	True	NA	15	True	AATATA	-40	NA	6310681	6328506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6310849_6312158_6312365_6313628_6313785_6315004_6315170_6315553_6315650_6315868_6315920_6316254_6316405_6317302_6317414_6317546_6317697_6317856_6317995_6318300_6318421_6318744_6318878_6318992_6319109_6326427_6326574_6327253_6327947_6328135
transcript_41940.nic	chr12	+	2921	16	NIC	ENSG00000008323.16	novel	2969	16	NA	NA	-15	0	combination_of_known_junctions	TRUE	canonical	3	28	junction_9	28.1089942110271	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATTTTAAAAATT	6309521	True	NA	-6	True	AATATA	-19	NA	6310666	6328485	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_6310849_6312158_6312365_6313628_6313785_6315004_6315170_6315553_6315650_6315868_6315920_6316254_6316405_6317302_6317414_6317546_6317697_6317898_6317995_6318300_6318421_6318744_6318878_6318992_6319109_6326427_6326574_6327253_6327947_6328135
transcript_41947.known	chr12	+	1683	12	FSM	ENSG00000008323.16	ENST00000536531.5	1683	12	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_6	18.1107702762748	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTCTCCTCCATCCAGA	6309592	True	NA	4	True	AATAAA	-16	NA	6310737	6318973	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6310849_6312158_6312365_6313628_6313785_6315004_6315170_6315553_6315650_6315868_6315920_6316254_6316405_6317302_6317414_6317546_6317697_6317856_6317995_6318300_6318421_6318744
transcript_4195.known	chr1	+	8701	18	FSM	ENSG00000184677.18	ENST00000375647.5	8701	18	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_7	4.91097210935101	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAACTATTCCCTGCATTC	22450834	True	NA	10	True	AATAAA	-17	NA	22451850	22531154	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_22452005_22489879_22490646_22491399_22491534_22501491_22501685_22502298_22502442_22506048_22506242_22508000_22508138_22508529_22508732_22509099_22509234_22511178_22511348_22511675_22512135_22512923_22513131_22517299_22517465_22520060_22520276_22521495_22521659_22522376_22522464_22524217_22524445_22526201
transcript_41966.known	chr12	-	2171	10	FSM	ENSG00000067182.8	ENST00000162749.7	2171	10	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_6	18.4096056515862	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGCTCTTGGAGACAGT	-6338998	True	NA	-13	True	ACTAAA	-15	NA	6342076	6328770	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6329623_6329777_6330067_6330266_6330296_6330597_6330712_6330852_6330927_6333068_6333148_6333366_6333517_6333736_6333866_6334090_6334245_6341775
transcript_41969.nic	chr12	-	2138	9	NIC	ENSG00000067182.8	novel	2171	10	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_4	38.0493101120112	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGCTCTTGGAGACAGT	-6339039	True	NA	-13	True	ACTAAA	-15	NA	6342117	6328770	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_6329623_6329777_6330067_6330266_6330296_6330597_6330712_6333068_6333148_6333366_6333517_6333736_6333866_6334090_6334245_6341775
transcript_41980.nic	chr12	-	3522	13	NIC	ENSG00000111319.13	novel	3149	13	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_12	76.1345665399247	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGTCTGGAGAGCTGGA	-6365483	True	NA	-2	True	AATAAA	-16	NA	6375459	6346846	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_6348254_6348726_6348803_6348949_6349006_6349163_6349222_6349326_6349406_6354437_6354556_6354749_6354849_6355271_6355436_6355776_6355881_6362050_6362242_6363442_6363711_6374367_6374838_6375027
transcript_41981.nic	chr12	-	3251	13	NIC	ENSG00000111319.13	novel	3149	13	NA	NA	50	0	intron_retention	FALSE	canonical	3	32	junction_12	73.8031823312669	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGTCTGGAGAGCTGGA	-6365537	True	NA	-2	True	AATAAA	-16	NA	6375513	6346846	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_6348254_6348726_6348803_6348949_6349006_6349163_6349222_6349326_6349406_6354437_6354556_6354749_6354849_6355271_6355436_6355776_6355881_6362050_6362242_6363442_6363711_6374367_6374838_6375352
transcript_41982.known	chr12	-	3149	13	FSM	ENSG00000111319.13	ENST00000228916.7	3149	13	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_12	67.8955488640865	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGTCTGGAGAGCTGGA	-6365587	True	NA	-2	True	AATAAA	-16	NA	6375563	6346846	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6348254_6348726_6348803_6348949_6349006_6349163_6349222_6349326_6349406_6354437_6354556_6354749_6354849_6355271_6355436_6355776_6355881_6362050_6362242_6363442_6363711_6374367_6374838_6375504
transcript_41986.known	chr12	-	3481	12	FSM	ENSG00000111319.13	ENST00000360168.7	3481	12	0	0	0	0	multi-exon	TRUE	canonical	3	250	junction_10	27.2966561691451	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGAGAGCTGGATGGG	-6375213	False	48	2	True	AATAAA	-20	NA	6375224	6346842	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6348254_6348726_6348803_6348949_6349006_6349163_6349222_6349326_6349406_6354437_6354556_6354749_6354849_6355271_6355436_6355776_6355881_6362050_6362242_6363442_6363711_6374367
transcript_4199.known	chr1	+	5019	17	FSM	ENSG00000070886.12	ENST00000166244.8	5019	17	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	25.4152236612232	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCGTCCCCCATTTTTTC	22562663	True	NA	5	True	AATAAA	-17	NA	22563488	22603595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_22563730_22569288_22569354_22576216_22576881_22586479_22586636_22588870_22589207_22593325_22593451_22593523_22593687_22595229_22595324_22596105_22596174_22597311_22597477_22597675_22597862_22598150_22598213_22598837_22599048_22600660_22600811_22600897_22601089_22601299_22601474_22601626
transcript_41991.known	chr12	-	2203	11	FSM	ENSG00000111319.13	ENST00000338748.9	2203	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	89.6133918563515	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACACGCAGGCATGCACG	-6374792	False	NA	NA	False	AAGAAA	-32	NA	6374803	6347508	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6348254_6348726_6348803_6348949_6349006_6349163_6349222_6349326_6349406_6354437_6354556_6354749_6354849_6355271_6355436_6355776_6355881_6363442_6363711_6374367
transcript_41992.known	chr12	-	2336	11	FSM	ENSG00000111319.13	ENST00000396966.6	2336	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	88.5033897655903	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACACGCAGGCATGCACG	-6374792	False	NA	NA	False	AAGAAA	-32	NA	6374803	6347508	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6348254_6348726_6348803_6348949_6349006_6349326_6349406_6354437_6354556_6354749_6354849_6355271_6355436_6355776_6355881_6362050_6362242_6363442_6363711_6374367
transcript_41994.known	chr12	+	2134	10	FSM	ENSG00000111321.11	ENST00000228918.9	2134	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	3.43187671366233	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAATTTATTTTCTTGGGA	6383936	True	NA	4	True	AATAAA	-15	NA	6384161	6391566	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6384455_6384587_6384685_6385021_6385148_6385226_6385380_6386065_6386163_6386346_6386445_6388397_6388506_6388799_6388826_6390111_6390341_6390659
transcript_41998.nic	chr12	-	4616	3	ISM	ENSG00000111319.13	ENST00000543768.1	2361	13	1121	12081	-210	3781	internal_fragment	FALSE	canonical	3	250	junction_1	9	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATATCTGAGTCTGGGTA	-6375759	True	NA	NA	False	NA	NA	NA	6376238	6359764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_6362242_6363442_6363711_6374367
transcript_41999.nic	chr12	-	2421	3	ISM	ENSG00000111319.13	ENST00000396966.6	2336	11	-681	13697	-50	2340	5prime_fragment	FALSE	canonical	3	250	junction_1	9	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATTCATTCAGTGTTCG	-6365508	True	NA	NA	False	AGTAAA	-9	NA	6375484	6361205	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_6362242_6363442_6363711_6374367
transcript_42.known	ERCC-00111	+	978	1	FSM	ERCC-00111A	DQ883685	978	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	978	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00111_+_0_1000
transcript_42000.known	chr12	-	575	3	FSM	ENSG00000111319.13	ENST00000536176.1	575	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	118	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTCACCACTCTCGTGG	-6365403	True	NA	NA	False	AATACA	-2	NA	6375379	6363632	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6363711_6374367_6374838_6375352
transcript_42003.known	chr12	+	1781	7	FSM	ENSG00000139192.12	ENST00000266556.8	1781	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.5723301886761	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAACTGTTGTTATTACT	6452005	True	NA	23	True	AATACA	-37	NA	6452041	6462316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6452313_6453066_6453298_6453446_6453717_6457405_6457745_6458644_6458948_6460854_6460939_6462033
transcript_42004.known	chr12	-	1766	7	FSM	ENSG00000215039.8	ENST00000545339.5	1766	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	15.1299922890485	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATATTTTATTTATTGATT	-6451177	True	NA	61	True	AATAAA	-30	NA	6451567	6439160	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6439677_6443545_6443718_6446960_6447088_6448036_6448151_6448639_6448738_6450340_6450981_6451468
transcript_42007.known	chr12	-	747	5	FSM	ENSG00000139190.17	ENST00000535180.5	747	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	19.2142525225417	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTCTCCCAGCCCTATC	-6469859	True	NA	NA	False	NA	NA	NA	6470645	6462676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6462970_6464889_6464942_6465841_6466001_6466224_6466352_6470529
transcript_42010.known	chr12	-	3139	4	FSM	ENSG00000139190.17	ENST00000361716.8	3139	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	8.48528137423857	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTGGTTGTTGTTTGG	-6469891	True	NA	NA	False	ATTAAA	-1	NA	6470677	6462236	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6464942_6465841_6466001_6466224_6466352_6470529
transcript_42011.known	chr12	-	700	3	FSM	ENSG00000215039.8	ENST00000504270.2	700	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	21.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTGCTATTGTTTTAGT	-6451125	True	NA	NA	False	ATTAAA	-28	NA	6451515	6447615	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6448151_6448639_6448758_6451468
transcript_42012.known	chr12	-	2736	5	FSM	ENSG00000139190.17	ENST00000396308.4	2736	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	20.017180121086	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTGGTTGTTGTTTGG	-6469891	True	NA	NA	False	ATTAAA	-1	NA	6470677	6462236	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6464487_6464889_6464942_6465841_6466001_6466224_6466352_6470529
transcript_42021.known	chr12	+	4825	32	FSM	ENSG00000010292.13	ENST00000315579.10	4825	32	0	0	0	0	multi-exon	FALSE	canonical	3	407	junction_6	97.4228796627866	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTTTTTCCTAAGCTTG	6486889	True	NA	34	True	AATAAA	-19	NA	6494101	6531955	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6494155_6495075_6495226_6509716_6509793_6510074_6510134_6510628_6510811_6511109_6511253_6514264_6514393_6514463_6514588_6514772_6514921_6516827_6517026_6517364_6517500_6517595_6517684_6517778_6517960_6520985_6521111_6521797_6522038_6522827_6523003_6523261_6523347_6525582_6525717_6526067_6526201_6526286_6526372_6526447_6526616_6526890_6527064_6527776_6527889_6527967_6528092_6528172_6528329_6528678_6528857_6528944_6529040_6529512_6529594_6529774_6529959_6530690_6530818_6530920_6531077_6531326
transcript_42031.nic	chr12	+	4902	31	ISM	ENSG00000010292.13	ENST00000315579.10	4825	32	-746	919	0	306	5prime_fragment	TRUE	canonical	3	407	junction_6	96.0252513086474	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAAGTTGTCTTCTCAAG	6491865	True	NA	NA	False	AAAAAG	-4	NA	6493355	6531036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_6494155_6495075_6495226_6509716_6509793_6510074_6510134_6510628_6510811_6511109_6511253_6514264_6514393_6514463_6514588_6514772_6514921_6516827_6517026_6517364_6517500_6517595_6517684_6517778_6517960_6520985_6521111_6521797_6522038_6522827_6523003_6523261_6523347_6525582_6525717_6526067_6526201_6526286_6526372_6526447_6526616_6526890_6527064_6527776_6527889_6527967_6528092_6528172_6528329_6528678_6528857_6528944_6529040_6529512_6529594_6529774_6529959_6530690_6530818_6530920
transcript_42053.known	chr12	-	898	3	FSM	ENSG00000111639.8	ENST00000229238.5	898	3	0	0	0	0	multi-exon	FALSE	canonical	3	2501	junction_2	175.5	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGTACTACTCTCATAA	-6480877	True	NA	0	True	AATATA	-20	NA	6493262	6491885	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6492468_6492861_6492973_6493057
transcript_42054.known	chr12	-	343	3	FSM	ENSG00000111639.8	ENST00000540949.1	343	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	1400.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTCGATAGAAGAGAAAGC	-6480910	True	NA	-161	True	AATAAA	-42	NA	6493295	6492280	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6492468_6492861_6492973_6493250
transcript_42055.known	chr12	-	814	3	FSM	ENSG00000111639.8	ENST00000543164.5	814	3	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_2	1313	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGCCACATACTTTTGTT	-6490613	True	NA	-27	True	AATAAA	-21	NA	6493840	6492146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6492468_6492861_6492973_6493458
transcript_42057.known	chr12	-	472	3	FSM	ENSG00000111639.8	ENST00000543959.5	472	3	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_2	1370	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGATAGCCACATACTT	-6493695	False	NA	-32	True	AATAAA	-16	NA	6493718	6492151	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6492468_6492861_6492973_6493673
transcript_42058.known	chr12	-	601	3	FSM	ENSG00000111639.8	ENST00000537701.5	601	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1426	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAGACTATGAAGTCTTG	-6490614	True	NA	17	True	NA	NA	NA	6493841	6492102	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6492468_6492861_6492973_6493716
transcript_42059.known	chr12	+	330	1	FSM	ENSG00000239002.3	ENST00000459255.1	330	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGTGCTGGGTGTTTTGA	NA	False	NA	NA	False	NA	NA	NA	6510221	6510551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6510200_6510600
transcript_42061.known	chr12	+	1348	9	FSM	ENSG00000111640.15	ENST00000396861.5	1348	9	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_1	8558.92833537003	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTCAACCAGTTACTTG	5989553	False	NA	19	True	AATAAA	-7	NA	6534533	6538359	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6534662_6534809_6534862_6536493_6536594_6536683_6536791_6536919_6537011_6537100_6537217_6537308_6537391_6537583_6537997_6538100
transcript_42062.known	chr12	+	1292	8	FSM	ENSG00000111640.15	ENST00000396858.5	1292	8	0	0	0	0	multi-exon	FALSE	canonical	3	831	junction_1	8918.08294353417	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTAGGGAGCCGCACCTTG	6535167	False	NA	-25	True	NA	NA	NA	6535301	6538315	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6535470_6536493_6536594_6536683_6536791_6536919_6537011_6537100_6537217_6537308_6537391_6537583_6537997_6538100
transcript_42064.known	chr12	+	1285	9	FSM	ENSG00000111640.15	ENST00000229239.10	1285	9	0	0	0	0	multi-exon	FALSE	canonical	3	21253	junction_1	1792.38254496634	26406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACTTGTCCTGTCTTATT	5989536	True	NA	31	True	AATAAA	-19	NA	6534516	6538371	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6534570_6534809_6534862_6536493_6536594_6536683_6536791_6536919_6537011_6537100_6537217_6537308_6537391_6537583_6537997_6538100
transcript_42065.known	chr12	+	1256	8	FSM	ENSG00000111640.15	ENST00000396859.5	1256	8	0	0	0	0	multi-exon	FALSE	canonical	3	24885	junction_4	849.448392445693	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACCATCAATAAAGTACCC	6534251	False	NA	-1	True	NA	NA	NA	6534753	6538339	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6534862_6536493_6536594_6536683_6536791_6536919_6537011_6537100_6537217_6537308_6537391_6537583_6537997_6538100
transcript_42066.known	chr12	+	1266	9	FSM	ENSG00000111640.15	ENST00000396856.5	1266	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	8629.17694148753	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCATCAATAAAGTACCCT	5989551	False	NA	0	True	NA	NA	NA	6534531	6538340	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6534570_6534809_6534862_6536493_6536594_6536683_6536818_6536919_6537011_6537100_6537217_6537308_6537391_6537583_6537997_6538100
transcript_42068.nnic	chr12	-	2603	11	NNC	ENSG00000010295.20	novel	2680	10	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	28.8626055649867	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTGCACTTTGGTGT	-6556094	False	NA	-12	True	AATGAA	-12	NA	6556105	6539538	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_6540589_6541511_6541643_6548064_6548161_6548424_6548546_6548667_6548826_6549475_6549485_6549755_6549897_6550694_6550791_6550940_6551002_6555256_6555884_6555992
transcript_42070.nnic	chr12	-	2648	11	NNC	ENSG00000010295.20	novel	2786	10	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	8	junction_9	26.8804761862583	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTGCACTTTGGTGT	-6555510	True	NA	-12	True	AATGAA	-12	NA	6556053	6539538	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_6540589_6541511_6541643_6548064_6548161_6548424_6548546_6548667_6548826_6549755_6549897_6550694_6550791_6550940_6551002_6551397_6551504_6555256_6555884_6555992
transcript_42072.known	chr12	-	2680	10	FSM	ENSG00000010295.20	ENST00000356896.8	2680	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	28.6037207283628	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTGCACTTTGGTGT	-6555530	True	NA	-12	True	AATGAA	-12	NA	6556073	6539538	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6540589_6541511_6541643_6548064_6548161_6548424_6548546_6548667_6548826_6549475_6549485_6549755_6549897_6550694_6550791_6550940_6551002_6555256
transcript_42073.known	chr12	-	2786	10	FSM	ENSG00000010295.20	ENST00000487279.6	2786	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	25.660172338557	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTGTCACTGTCTCAA	-6555528	True	NA	-1	True	AATGAA	-23	NA	6556071	6539527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6540589_6541511_6541643_6548064_6548161_6548424_6548546_6548667_6548826_6549755_6549897_6550694_6550791_6550940_6551002_6551397_6551504_6555256
transcript_42074.nnic	chr12	-	2594	10	NNC	ENSG00000010295.20	novel	2680	10	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	14	junction_9	21.8326971917504	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTGCACTTTGGTGT	-6556094	False	NA	-12	True	AATGAA	-12	NA	6556105	6539538	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_6540589_6541511_6541643_6548064_6548161_6548424_6548546_6548667_6548826_6549755_6549897_6550694_6550791_6550940_6551002_6555256_6555884_6555992
transcript_42077.nnic	chr12	-	2964	10	NNC	ENSG00000010295.20	novel	3001	9	NA	NA	-32	0	intron_retention	FALSE	non_canonical	3	8	junction_8	27.682503276516	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTGCACTTTGGTGT	-6556094	False	NA	-12	True	AATGAA	-12	NA	6556105	6539538	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_6540589_6541511_6541643_6548064_6548546_6548667_6548826_6549755_6549897_6550694_6550791_6550940_6551002_6551397_6551504_6555256_6555884_6555992
transcript_42079.known	chr12	-	2677	9	FSM	ENSG00000010295.20	ENST00000396840.6	2677	9	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	17.4266319178434	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTGTCACTGTCTCAA	-6555528	True	NA	-1	True	AATGAA	-23	NA	6556071	6539527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6540589_6541511_6541643_6548064_6548158_6548424_6548546_6548667_6548826_6549755_6549897_6550694_6550791_6550940_6551002_6555256
transcript_42083.known	chr12	-	3001	9	FSM	ENSG00000010295.20	ENST00000488007.5	3001	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_8	26.0525310670576	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAATGGATTCTTTAATAA	-6555528	True	NA	-50	True	NA	NA	NA	6556071	6539576	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6540589_6541511_6541643_6548064_6548546_6548667_6548826_6549755_6549897_6550694_6550791_6550940_6551002_6551397_6551504_6555256
transcript_42084.nnic	chr12	-	2858	9	NNC	ENSG00000010295.20	novel	2680	10	NA	NA	-32	0	intron_retention	FALSE	non_canonical	3	14	junction_8	21.3888843795089	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTGCACTTTGGTGT	-6556094	False	NA	-12	True	AATGAA	-12	NA	6556105	6539538	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_6540589_6541511_6541643_6548064_6548546_6548667_6548826_6549755_6549897_6550694_6550791_6550940_6551002_6555256_6555884_6555992
transcript_42087.nic	chr12	-	2978	8	NIC	ENSG00000010295.20	novel	2680	10	NA	NA	-43	0	intron_retention	FALSE	canonical	3	31	junction_7	14.5644240867805	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTGCACTTTGGTGT	-6556106	False	NA	-12	True	AATGAA	-12	NA	6556116	6539538	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_6540589_6541511_6541643_6548064_6548546_6548667_6548826_6549755_6549897_6550694_6550791_6550940_6551002_6555256
transcript_42097.known	chr12	-	2791	17	FSM	ENSG00000111641.12	ENST00000620535.4	2791	17	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_12	154.576121518655	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGAGTATTTTTGAGGG	-6558544	True	NA	-1	True	AATACA	-18	NA	6568332	6556869	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563513_6563611_6563772_6563890_6563947_6564149_6564249_6566100_6566337_6566528_6566618_6566776_6566823_6567815_6567923_6568206
transcript_42100.nic	chr12	-	2772	16	NIC	ENSG00000111641.12	novel	2701	16	NA	NA	-25	0	combination_of_known_junctions	FALSE	non_canonical	1	93	junction_9	119.897437652168	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTATTTTTGAGG	-6568337	False	NA	-2	True	AATACA	-17	NA	6568357	6556870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563513_6563611_6563772_6563890_6563947_6566100_6566325_6566528_6566618_6566776_6566823_6567815_6567923_6568138
transcript_42101.known	chr12	-	3038	16	FSM	ENSG00000111641.12	ENST00000541778.5	3038	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	121.132874701021	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTATTTTTGAGG	-6568663	False	NA	-2	True	AATACA	-17	NA	6568691	6556870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563515_6563613_6563772_6563890_6563947_6566100_6566325_6566528_6566618_6566776_6566823_6567815_6567923_6568206
transcript_42104.nic	chr12	-	2784	16	NIC	ENSG00000111641.12	novel	2791	17	NA	NA	-25	0	combination_of_known_junctions	FALSE	non_canonical	1	93	junction_9	111.47368398964	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTATTTTTGAGG	-6568337	False	NA	-2	True	AATACA	-17	NA	6568357	6556870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563513_6563611_6563772_6563890_6563947_6566100_6566337_6566528_6566618_6566776_6566823_6567815_6567923_6568138
transcript_42105.nic	chr12	-	2712	16	NIC	ENSG00000111641.12	novel	2791	17	NA	NA	-21	0	combination_of_known_junctions	FALSE	non_canonical	1	93	junction_9	91.9681104151506	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTATTTTTGAGG	-6568333	False	NA	-2	True	AATACA	-17	NA	6568353	6556870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563513_6563611_6563772_6563890_6563947_6566100_6566337_6566528_6566618_6566776_6566823_6567815_6567923_6568206
transcript_4211.known	chr1	+	3085	21	FSM	ENSG00000004487.18	ENST00000400181.9	3085	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	984.647615901242	1248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCTCTTTTGTTCCTTT	22987800	True	NA	17	True	AATAAA	-17	NA	23019467	23083689	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_23019948_23030468_23030635_23044426_23044487_23050386_23050521_23053760_23053840_23055068_23055162_23055931_23056039_23057483_23057566_23059072_23059168_23066059_23066072_23068538_23068682_23069060_23069152_23071224_23071360_23072123_23072198_23073291_23073404_23077227_23077361_23078989_23079178_23079552_23079668_23081445_23081574_23082219_23082367_23083178
transcript_42121.nic	chr12	-	2832	15	NIC	ENSG00000111641.12	novel	2791	17	NA	NA	-21	0	intron_retention	FALSE	non_canonical	1	93	junction_8	95.1634737422604	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTATTTTTGAGG	-6568333	False	NA	-2	True	AATACA	-17	NA	6568353	6556870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_6557643_6560097_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563513_6563611_6563772_6563890_6563947_6566100_6566337_6566528_6566618_6566776_6566823_6567815_6567923_6568206
transcript_42154.known	chr12	-	1002	6	FSM	ENSG00000111641.12	ENST00000542015.1	1002	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	167.767696533033	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCACCCTGAAACCTAAGGA	-6558493	True	NA	NA	False	NA	NA	NA	6568281	6557220	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560744_6567815_6567923_6568206
transcript_42157.known	chr12	-	630	4	FSM	ENSG00000111641.12	ENST00000545915.5	630	4	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_3	25.3026129524645	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCCAGCACCTGGCAGTGA	-6558537	True	NA	NA	False	NA	NA	NA	6568325	6566259	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6566618_6566776_6566823_6567815_6567923_6568206
transcript_42162.known	chr12	-	2650	16	FSM	ENSG00000111641.12	ENST00000322166.10	2650	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	112.270625425056	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTATTTTTGAGG	-6558503	True	NA	-2	True	AATACA	-17	NA	6568291	6556870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563515_6563613_6563772_6563890_6563947_6566100_6566337_6566528_6566618_6566776_6566823_6567815_6567923_6568206
transcript_42163.known	chr12	-	2701	16	FSM	ENSG00000111641.12	ENST00000399466.6	2701	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	135.092495062539	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTATTTTTGAGG	-6558498	True	NA	-2	True	AATACA	-17	NA	6568286	6556870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563515_6563613_6563772_6563890_6563947_6566100_6566325_6566528_6566618_6566776_6566823_6567815_6567923_6568138
transcript_42164.known	chr12	-	2751	17	FSM	ENSG00000111641.12	ENST00000545200.5	2751	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	165.014002720224	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTATTTTTGAGG	-6558494	True	NA	-2	True	AATACA	-17	NA	6568282	6556870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6557643_6558015_6558138_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563515_6563613_6563772_6563890_6563947_6566100_6566325_6566528_6566618_6566776_6566823_6567815_6567923_6568206
transcript_42165.known	chr12	-	689	6	FSM	ENSG00000111641.12	ENST00000536124.5	689	6	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_5	112.304942010581	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTTTGGAAGCTATTG	-6558505	True	NA	NA	False	NA	NA	NA	6568293	6563890	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6563947_6566100_6566337_6566528_6566618_6566776_6566823_6567815_6567923_6568138
transcript_42166.known	chr12	-	6359	40	FSM	ENSG00000111642.16	ENST00000646806.1	6359	40	0	0	0	0	multi-exon	TRUE	canonical	3	105	junction_32	223.802095702347	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATGAAATAAAGTGGAAA	-6596316	True	NA	-39	True	NA	NA	NA	6607413	6570187	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6570694_6570868_6571033_6573073_6573270_6577784_6577918_6578028_6578138_6578408_6578547_6578845_6578918_6581043_6581174_6581290_6581389_6581648_6581815_6582136_6582282_6582614_6582749_6582847_6582937_6583026_6583114_6583197_6583379_6587383_6587560_6587711_6587950_6588297_6588423_6591465_6591584_6591693_6591826_6591915_6592058_6592392_6592567_6592695_6592818_6593090_6593229_6593415_6593617_6594458_6594651_6595333_6595431_6596005_6596138_6597893_6598100_6598221_6598426_6599772_6600013_6600216_6600357_6600533_6600670_6600925_6601054_6601288_6601531_6601647_6601767_6601959_6602155_6602375_6602498_6606273_6606452_6607299
transcript_42167.known	chr12	-	2683	2	FSM	ENSG00000184574.10	ENST00000329858.9	2683	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGGCTCAGGGTTTTCC	-6635930	True	NA	NA	False	AATAAA	-20	NA	6635959	6618834	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6621465_6635906
transcript_42170.known	chr12	-	1905	10	FSM	ENSG00000111644.8	ENST00000229243.7	1905	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	5.11593974809837	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTGGCCTGTTCTGG	-6647268	True	NA	1	True	CATAAA	-14	NA	6647432	6638074	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6638405_6638953_6639038_6640059_6640228_6640342_6640523_6643538_6643672_6644136_6644606_6645219_6645338_6646482_6646578_6646793_6647013_6647323
transcript_42174.known	chr12	-	1053	5	FSM	ENSG00000111644.8	ENST00000536350.5	1053	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	3.89711431702997	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTCCAGATCCACTCAGA	-6647229	False	NA	NA	False	NA	NA	NA	6647393	6644054	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6644606_6645219_6645338_6646482_6646578_6646793_6647013_6647323
transcript_42176.known	chr12	-	811	4	FSM	ENSG00000111644.8	ENST00000544352.1	811	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	4.49691252107735	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGCAGGAGCAAGGAGTG	-6647119	False	NA	NA	False	NA	NA	NA	6647283	6644497	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6644606_6645219_6645338_6646482_6646578_6646793
transcript_42178.known	chr12	-	1150	9	FSM	ENSG00000111653.20	ENST00000488381.5	1150	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	64.1248781675256	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATGGCACAGTGCTGTCA	-6659861	True	NA	NA	False	NA	NA	NA	6663129	6651095	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6651235_6651323_6651386_6652270_6652419_6652661_6652768_6652935_6653051_6653229_6653397_6655637_6655914_6656726_6656799_6663064
transcript_42183.known	chr12	-	741	8	FSM	ENSG00000111653.20	ENST00000412586.6	741	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	53.5879974377449	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGGGCCTTGGATTCCAA	-6659833	True	NA	NA	False	AAGAAA	-4	NA	6663101	6651194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6651235_6651323_6651386_6652270_6652419_6652661_6652771_6652944_6653051_6653229_6653397_6656726_6656799_6663064
transcript_42185.known	chr12	-	1393	8	FSM	ENSG00000111653.20	ENST00000396807.8	1393	8	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	36.8837113542727	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTTTATTGTAG	-6659872	True	NA	-24	True	AATAAA	-15	NA	6663140	6650590	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6651235_6651323_6651386_6652270_6652419_6652661_6652771_6652935_6653051_6653229_6653397_6656726_6656799_6663064
transcript_42189.known	chr12	-	776	7	FSM	ENSG00000111653.20	ENST00000469749.5	776	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	54.5967540752704	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCGCAGCCACTAACGGTA	-6659846	True	NA	NA	False	NA	NA	NA	6663114	6651011	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6651235_6651323_6651386_6652270_6652419_6652661_6652768_6652935_6653051_6656726_6656799_6663064
transcript_42190.known	chr12	-	678	7	FSM	ENSG00000111653.20	ENST00000444704.5	678	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	58.4249280891489	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGGGCCTTGGATTCCAA	-6659833	True	NA	NA	False	AAGAAA	-4	NA	6663101	6651194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6651235_6651323_6651386_6652270_6652419_6652661_6652771_6652935_6653051_6653229_6653397_6663064
transcript_42191.known	chr12	-	1280	7	FSM	ENSG00000111653.20	ENST00000619641.4	1280	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	58.4306331378404	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGCGTCCTCTGGGTTG	-6659874	True	NA	28	True	AGTAAA	-15	NA	6663142	6650538	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6651235_6651323_6651386_6652270_6652419_6652661_6652771_6652935_6653051_6656726_6656799_6663064
transcript_42193.known	chr12	-	942	6	FSM	ENSG00000111653.20	ENST00000472002.5	942	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	56.6462708393059	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCCGCAGCCACTAACGG	-6659846	True	NA	NA	False	NA	NA	NA	6663114	6651013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6651235_6651323_6651386_6652270_6652419_6652661_6653051_6656726_6656799_6663064
transcript_42197.known	chr12	-	3407	12	FSM	ENSG00000126746.18	ENST00000683879.1	3407	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	101.779700520372	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGGCAGTGGAGCTACT	-6687700	True	NA	-2	True	AATAAA	-15	NA	6689375	6666476	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6668116_6669030_6669190_6670759_6670839_6672349_6672533_6673215_6673441_6677166_6677260_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166_6688227_6689097
transcript_42201.known	chr12	-	2978	11	FSM	ENSG00000126746.18	ENST00000361959.7	2978	11	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_10	87.335216264689	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGTTTTGTTTATTTT	-6689281	False	NA	-5	True	TATAAA	-26	NA	6689292	6666729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6668116_6669030_6669190_6670759_6670839_6672349_6672533_6673215_6673441_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166_6688227_6689097
transcript_42202.known	chr12	-	3008	11	FSM	ENSG00000126746.18	ENST00000396801.7	3008	11	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_10	84.5917253636548	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTTAAATCAT	-6689499	False	NA	77	True	NA	NA	NA	6689510	6666647	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6668116_6669030_6669190_6670759_6670839_6672349_6672533_6673215_6673441_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166_6688227_6689367
transcript_42217.nic	chr12	-	2658	10	NIC	ENSG00000126746.18	novel	3266	10	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_9	76.8649609524536	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATATTTGATGTTTTG	-6686307	True	NA	-13	True	TATAAA	-18	NA	6688902	6666737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_6668116_6669030_6669190_6670759_6670839_6673215_6673441_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166_6688227_6688836
transcript_42218.known	chr12	-	3266	10	FSM	ENSG00000126746.18	ENST00000319770.7	3266	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_9	69.8872107200039	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGGCAGTGGAGCTACT	-6689499	False	NA	-2	True	AATAAA	-15	NA	6689510	6666476	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6668116_6669030_6669190_6670759_6670839_6673215_6673441_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166_6688227_6689097
transcript_42219.nic	chr12	-	2797	10	NIC	ENSG00000126746.18	novel	3008	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_9	65.3051715570732	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATATTTGATGTTTTG	-6689561	False	NA	-13	True	TATAAA	-18	NA	6689572	6666737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_6668116_6669030_6669190_6670759_6670839_6673215_6673441_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166_6688227_6689367
transcript_42224.nic	chr12	-	3334	9	ISM	ENSG00000126746.18	ENST00000319770.7	3266	10	542	261	-72	0	3prime_fragment	FALSE	canonical	3	197	junction_5	29.508473359359	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATATTTGATGTTTTG	-6686373	True	NA	-13	True	TATAAA	-18	NA	6688968	6666737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_6668116_6669030_6669190_6670759_6670839_6673215_6673441_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166
transcript_42232.known	chr12	-	2514	9	FSM	ENSG00000126746.18	ENST00000355772.8	2514	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	98.3857205086185	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATATTTGATGTTTTG	-6687779	True	NA	-13	True	TATAAA	-18	NA	6689454	6666737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6668116_6669030_6669190_6670759_6670839_6673215_6673441_6678126_6678344_6678945_6679184_6679454_6679526_6688166_6688227_6689367
transcript_42234.known	chr12	-	2432	6	FSM	ENSG00000139200.14	ENST00000540656.5	2432	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_5	23.1654915769124	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGAGTCCCCTGGTTCTG	-6700417	False	NA	-7	True	AATAAA	-14	NA	6700430	6693791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6695058_6695429_6695652_6696442_6696525_6697286_6697793_6698044_6698105_6700134
transcript_42235.known	chr12	-	2323	6	FSM	ENSG00000139200.14	ENST00000320591.9	2323	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	16.5698521417664	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGAGTCCCCTGGTTCTG	-6700787	False	NA	-7	True	AATAAA	-14	NA	6700800	6693791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6695058_6695429_6695652_6696442_6696525_6697286_6697793_6698044_6698105_6700613
transcript_42237.known	chr12	-	2711	5	FSM	ENSG00000139200.14	ENST00000534837.6	2711	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	8.10478253872366	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGAGTCCCCTGGTTCTGC	-6700802	False	NA	-6	True	AATAAA	-15	NA	6700815	6693790	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6695652_6696442_6696525_6697286_6697793_6698044_6698105_6700613
transcript_42240.known	chr12	+	1831	8	FSM	ENSG00000111652.10	ENST00000543155.6	1831	8	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_1	71.7831200668417	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACCCTGAACTGGGTATCT	6721836	True	NA	40	True	AATAAA	-24	NA	6724045	6731865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6724180_6724613_6724819_6727925_6728002_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_42243.known	chr12	+	1721	8	FSM	ENSG00000111652.10	ENST00000229251.7	1721	8	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	125.749670344843	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATATATCTATATATAATA	6721861	True	NA	11	True	ATTAAA	-18	NA	6724070	6731807	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6724153_6724613_6724819_6727925_6728002_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_42244.known	chr12	+	1832	8	FSM	ENSG00000111652.10	ENST00000539735.5	1832	8	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	128.51204978046	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACGCAGAAATAAATCTATG	6721869	True	NA	3	True	ATTAAA	-39	NA	6724078	6731828	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6724251_6724613_6724819_6727925_6728002_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_42249.known	chr12	+	898	7	FSM	ENSG00000111652.10	ENST00000538375.5	898	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	152.254629559243	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCCTCAGAGAGCCTTCT	6721925	True	NA	NA	False	NA	NA	NA	6724134	6731097	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6724180_6724613_6724819_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_42252.known	chr12	+	1768	7	FSM	ENSG00000111652.10	ENST00000626119.2	1768	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	178.476655803124	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGTATCTTCTGTGTT	6723988	True	NA	48	True	AATAAA	-32	NA	6724013	6731873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6724153_6724613_6724819_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_42254.known	chr12	+	2034	7	FSM	ENSG00000111652.10	ENST00000534947.5	2034	7	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_2	22.2617010431219	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTATCTTCTGTGTTTG	6723546	True	NA	50	True	AATAAA	-34	NA	6724286	6731875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6724819_6727925_6728002_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_42260.nic	chr12	+	1957	6	ISM	ENSG00000111652.10	ENST00000543939.5	1728	7	159	-41	-9	0	3prime_fragment	FALSE	canonical	3	54	junction_1	159.604009974687	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACCCTGAACTGGGTATCT	6724148	False	NA	40	True	AATAAA	-24	NA	6724277	6731865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_6724819_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_42263.known	chr12	+	1707	8	FSM	ENSG00000111652.10	ENST00000534877.5	1707	8	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	144.077076877735	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATGAGAAATCTATCTAC	6723557	False	NA	17	True	AATAAA	-1	NA	6724297	6731842	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6724331_6724613_6724819_6727925_6728002_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_42266.known	chr12	-	1555	9	FSM	ENSG00000089693.11	ENST00000203630.10	1555	9	0	0	0	0	multi-exon	FALSE	canonical	3	2813	junction_5	303.317387401382	724	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTGGGATTCTGGCTGT	-6732693	True	NA	-10	True	AATAAA	-18	NA	6753141	6747995	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6748548_6748769_6748983_6749847_6750008_6750176_6750306_6750712_6750767_6751640_6751677_6751924_6752055_6752284_6752363_6752938
transcript_42277.known	chr12	+	773	5	FSM	ENSG00000159335.18	ENST00000389462.8	773	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	640.887860705756	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCAGCCAAGTCCAGCCAC	6745339	False	NA	NA	False	NA	NA	NA	6766374	6770498	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6766751_6769602_6769675_6769843_6770000_6770156_6770219_6770391
transcript_42278.known	chr12	+	1162	5	FSM	ENSG00000159335.18	ENST00000309083.8	1162	5	0	0	0	0	multi-exon	FALSE	canonical	3	1287	junction_2	173.207065387068	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTCCTGCTTTCCCGG	6745327	True	NA	30	True	AATAAA	-26	NA	6766362	6770952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6766751_6769602_6769675_6769920_6770000_6770156_6770219_6770391
transcript_42286.known	chr12	+	3049	10	FSM	ENSG00000010610.10	ENST00000011653.9	3049	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	6.25388767976457	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAAGATGCTCTTCGTGT	6789516	True	NA	4	True	AATAAA	-17	NA	6789527	6820799	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6789663_6800071_6800188_6800306_6800472_6814141_6814301_6814758_6814993_6816055_6816404_6817129_6817331_6818420_6818543_6818846_6818915_6819298
transcript_42287.nnic	chr12	+	1679	3	NNC	ENSG00000010610.10	novel	3049	10	NA	NA	4487	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	6.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAAGATGCTCTTCGTGT	6818267	True	NA	4	True	AATAAA	-17	NA	6818540	6820799	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_6818651_6818846_6818915_6819298
transcript_42288.nnic	chr12	-	3326	2	Antisense	novelGene_ENSG00000110811.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGCCAGGCATGGTGGAA	-6829944	True	NA	NA	False	ATTAAA	-39	NA	6829955	6813356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr12_-_6816214_6829486
transcript_42291.known	chr12	+	1610	5	FSM	ENSG00000250510.8	ENST00000428545.6	1610	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	6.74536878161602	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTGTCCAGTGTACTG	6821430	False	NA	11	True	ATTAAA	-23	NA	6821703	6827421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6821901_6823467_6823764_6825483_6825674_6826195_6826354_6826652
transcript_42293.nic	chr12	+	2459	5	NIC	ENSG00000250510.8	novel	2495	5	NA	NA	-15	0	intron_retention	FALSE	canonical	2	2	junction_2	8.39642781187333	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTGTCCAGTGTACTG	6821648	True	NA	11	True	ATTAAA	-23	NA	6821805	6827421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_6821901_6823467_6824715_6825483_6825674_6826195_6826354_6826652
transcript_42294.known	chr12	+	2495	5	FSM	ENSG00000250510.8	ENST00000311268.8	2495	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	5.1478150704935	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTGTCCAGTGTACTG	6821663	True	NA	11	True	ATTAAA	-23	NA	6821820	6827421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6821901_6823467_6824766_6825483_6825674_6826195_6826354_6826652
transcript_42299.known	chr12	+	2129	14	FSM	ENSG00000110811.20	ENST00000612048.4	2129	14	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_4	16.274276358902	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAGGGGCCAGTCAAGTG	6829795	False	NA	23	True	AATAAA	-18	NA	6829827	6839846	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6830012_6830352_6830555_6830638_6830771_6831215_6831353_6831824_6831915_6833591_6833645_6833741_6833810_6833924_6834050_6836984_6837087_6837422_6837574_6837731_6837850_6837957_6838034_6838999_6839141_6839296
transcript_4230.known	chr1	+	3033	19	FSM	ENSG00000004487.18	ENST00000356634.7	3033	19	0	0	0	0	multi-exon	FALSE	canonical	3	1953	junction_2	315.200333121651	1959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCTCTTTTGTTCCTTT	22987780	True	NA	17	True	AATAAA	-17	NA	23019447	23083689	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_23019948_23030468_23030635_23050386_23050521_23053760_23053840_23055068_23055162_23055931_23056039_23057483_23057566_23059072_23059168_23068538_23068682_23069060_23069152_23071224_23071360_23072123_23072198_23073291_23073404_23077227_23077361_23078989_23079178_23079552_23079668_23081445_23081574_23082219_23082367_23083178
transcript_42300.known	chr12	+	2631	15	FSM	ENSG00000110811.20	ENST00000290510.10	2631	15	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	19.2555319377077	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGGGCCAGTCAAGTGT	6826806	True	NA	24	True	AATAAA	-19	NA	6828406	6839847	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6828939_6829858_6830012_6830352_6830555_6830638_6830771_6831215_6831353_6831824_6831915_6833591_6833645_6833741_6833810_6833924_6834050_6836984_6837087_6837422_6837574_6837731_6837850_6837957_6838034_6838999_6839141_6839296
transcript_42308.nic	chr12	-	3692	8	NIC	ENSG00000111665.12	novel	1144	6	NA	NA	-26	1	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	154.53656855388	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAAGTGTGTATGTGTGTG	-6844023	True	NA	-11	True	AAGAAA	-14	NA	6851318	6844797	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_6846368_6846724_6846904_6848060_6849199_6849322_6849430_6849564_6849859_6850466_6850597_6850832_6851010_6851221
transcript_42317.known	chr12	-	1047	6	FSM	ENSG00000111665.12	ENST00000229265.10	1047	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	141.433235132341	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCGAGTTTTCTGTGTGT	-6843957	True	NA	-2	True	AAAAAG	-16	NA	6851252	6848815	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6849199_6849322_6849430_6849564_6849784_6850466_6850597_6850832_6851010_6851221
transcript_42318.known	chr12	-	1144	6	FSM	ENSG00000111665.12	ENST00000538862.7	1144	6	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_5	20.1395134002786	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAAACCTTGCACCGAG	-6843991	True	NA	-14	True	ATTAAA	-34	NA	6851286	6848827	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6849199_6849322_6849430_6849564_6849859_6850466_6850597_6850832_6851010_6851221
transcript_42319.known	chr12	-	2760	5	FSM	ENSG00000111665.12	ENST00000422785.7	2760	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	162.97852619287	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTATGTGTGTGTGTAT	-6843974	True	NA	-6	True	AAGAAA	-19	NA	6851269	6844792	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6846904_6849564_6849859_6850466_6850597_6850832_6851010_6851221
transcript_42325.known	chr12	-	985	5	FSM	ENSG00000111665.12	ENST00000540683.1	985	5	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_1	149.244765402342	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTTAAAAAGGTATATGT	-6843954	True	NA	-29	True	ATTAAA	-19	NA	6851249	6848842	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6849199_6849564_6849859_6850466_6850597_6850832_6851010_6851221
transcript_42328.known	chr12	+	997	2	FSM	ENSG00000111664.11	ENST00000542751.1	997	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTCCTAAGACACCTGCA	NA	False	NA	-37	True	NA	NA	NA	6845366	6847352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6845803_6846791
transcript_42329.known	chr12	-	1327	5	FSM	ENSG00000111665.12	ENST00000535406.5	1327	5	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_2	17.6546736021938	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTAAACCTTGCACCGA	-6843963	True	NA	-15	True	ATTAAA	-33	NA	6851258	6848828	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6849199_6849322_6849430_6849564_6849859_6850466_6850597_6850832
transcript_42350.known	chr12	+	3083	20	FSM	ENSG00000111667.14	ENST00000389231.9	3083	20	0	0	0	0	multi-exon	FALSE	canonical	3	630	junction_1	53.4620791385555	1482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACGGCTAAATTGTGTCC	6837458	True	NA	4	True	AATAAA	-4	NA	6852147	6866620	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6852291_6855400_6855527_6855754_6855822_6856016_6856151_6856304_6856451_6856706_6856892_6857628_6857724_6858423_6858618_6859469_6859542_6860150_6860239_6860365_6860492_6860952_6861107_6861442_6861618_6862469_6862559_6863185_6863309_6863829_6863974_6864049_6864196_6864721_6864876_6865163_6865249_6865983
transcript_42354.known	chr12	+	3162	20	FSM	ENSG00000111667.14	ENST00000229268.13	3162	20	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_15	161.86592037018	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCCTGTTTGATACCT	6837460	True	NA	16	True	AATAAA	-16	NA	6852149	6866632	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6852291_6855400_6855527_6855754_6855822_6856016_6856151_6856304_6856451_6856706_6856892_6857628_6857724_6858423_6858618_6859469_6859542_6860150_6860239_6860365_6860492_6860952_6861107_6861442_6861618_6862469_6862559_6863185_6863378_6863829_6863974_6864049_6864196_6864721_6864876_6865163_6865249_6865983
transcript_42420.known	chr12	+	1615	8	FSM	ENSG00000010626.15	ENST00000007969.12	1615	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	4.89481191400338	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGTCTGACCGGGTT	NA	False	NA	23	True	AATAAA	-15	NA	6904732	6914229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6904904_6905584_6905760_6905844_6905955_6906408_6906663_6907314_6907446_6909889_6910027_6912729_6913028_6913890
transcript_42426.known	chr12	+	1351	7	FSM	ENSG00000111669.15	ENST00000396705.10	1351	7	0	0	0	0	multi-exon	FALSE	canonical	3	12468	junction_6	629.968098839581	17037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTACTATTTTTACTTG	6808787	True	NA	26	True	AAGAAA	-35	NA	6867530	6870948	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6867682_6868863_6868988_6869098_6869184_6869257_6869391_6869687_6869774_6870048_6870137_6870264
transcript_42430.known	chr12	+	1587	7	FSM	ENSG00000111669.15	ENST00000535434.5	1587	7	0	0	0	0	multi-exon	FALSE	canonical	2	192	junction_1	4963.81021886301	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACAACATCTCTTACTAT	6867517	True	NA	17	True	TATAAA	-45	NA	6868113	6870939	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6868510_6868863_6868988_6869098_6869184_6869257_6869391_6869687_6869774_6870048_6870137_6870264
transcript_42432.known	chr12	+	791	7	FSM	ENSG00000111669.15	ENST00000488464.6	791	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	5031.48849469242	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCATCCATCTTCCCTAC	6867503	True	NA	NA	False	NA	NA	NA	6868099	6870383	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6868256_6868863_6868988_6869098_6869184_6869257_6869391_6869687_6869774_6870048_6870137_6870264
transcript_42455.known	chr12	+	969	5	FSM	ENSG00000010626.15	ENST00000428946.5	969	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	6.26498204307083	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGTCTGACCGGGTT	6904655	True	NA	23	True	AATAAA	-15	NA	6904833	6914229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6904904_6905584_6905760_6906408_6906663_6907314_6907446_6913890
transcript_42463.known	chr12	+	587	3	FSM	ENSG00000240370.6	ENST00000451612.5	587	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	3.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGAAATGCCCATCGGC	6873466	False	NA	NA	False	NA	NA	NA	6873478	6884438	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6873782_6883703_6883920_6884370
transcript_42464.known	chr12	-	1205	3	FSM	ENSG00000111671.10	ENST00000523102.5	1205	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	43	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTCTTGTTTTTTTTTT	-6871997	True	NA	-5	True	AGTAAA	-27	NA	6873285	6870934	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6871320_6872237_6872987_6873214
transcript_42466.known	chr12	-	1203	3	FSM	ENSG00000111671.10	ENST00000524270.6	1203	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	51	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTCTTGTTTTTTTTTT	-6872015	True	NA	-5	True	AGTAAA	-27	NA	6873303	6870934	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6871320_6872237_6872998_6873245
transcript_42471.known	chr12	+	2294	12	FSM	ENSG00000111674.9	ENST00000229277.6	2294	12	0	0	0	0	multi-exon	TRUE	canonical	3	274	junction_1	64.1246204054945	494	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTGTCTAAGGAGTCT	6908869	True	NA	22	True	ATTAAA	-16	NA	6914579	6923697	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6914660_6915820_6915918_6916416_6916513_6916670_6916730_6917037_6917108_6917580_6917715_6917939_6918163_6919565_6919764_6921580_6921783_6922055_6922165_6922343_6922403_6922730
transcript_42473.nic	chr12	+	3107	6	ISM	ENSG00000111676.15	ENST00000396684.3	4702	10	8316	0	-1423	0	3prime_fragment	FALSE	canonical	3	64	junction_1	23.3032186618072	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCTGTGACTATTCTTT	6936251	True	NA	28	True	AAAACA	-21	NA	6936274	6942321	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_6937562_6937844_6938068_6938480_6939178_6940879_6941024_6941373_6941555_6941746
transcript_42474.nic	chr12	+	2397	5	NIC	ENSG00000111676.15	novel	4351	10	NA	NA	-430	0	intron_retention	FALSE	canonical	3	78	junction_1	17.5783958312469	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCTGTGACTATTCTTT	6937256	False	NA	28	True	AAAACA	-21	NA	6937267	6942321	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_6938068_6938480_6939178_6940879_6941024_6941373_6941555_6941746
transcript_42475.known	chr12	+	662	3	FSM	ENSG00000111678.11	ENST00000537087.5	662	3	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_2	442.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTCAGTCTCTTG	6942550	False	NA	15	True	AATAAA	-16	NA	6943833	6946002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6944174_6944475_6944566_6945770
transcript_42476.known	chr12	+	561	3	FSM	ENSG00000111678.11	ENST00000229281.6	561	3	0	0	0	0	multi-exon	FALSE	canonical	3	897	junction_2	60	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTCAGTCTCTTG	6927076	True	NA	15	True	AATAAA	-16	NA	6944021	6946002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6944174_6944475_6944653_6945770
transcript_42477.known	chr12	+	551	3	FSM	ENSG00000111678.11	ENST00000540506.2	551	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	439	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTAGCCTTGGTGTCAGT	6943988	False	NA	9	True	AATAAA	-10	NA	6944121	6945996	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6944174_6944379_6944653_6945770
transcript_42480.known	chr12	+	2159	16	FSM	ENSG00000111679.17	ENST00000399448.5	2159	16	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	25.4816709725943	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGCCTCTGAGCCCTTTG	6945113	True	NA	10	True	AATAAA	-18	NA	6946576	6961316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6946740_6951608_6951732_6951982_6952178_6954804_6954995_6955150_6955268_6955371_6955486_6955659_6955757_6956141_6956222_6956418_6956569_6957653_6957786_6957918_6958074_6959926_6959995_6960087_6960240_6960343_6960436_6960805_6960946_6961125
transcript_42492.nic	chr12	+	2259	15	NIC	ENSG00000111679.17	novel	2159	16	NA	NA	-43	0	intron_retention	TRUE	canonical	3	5	junction_1	35.5837614879688	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGCCTCTGAGCCCTTTG	6946336	False	NA	10	True	AATAAA	-18	NA	6946424	6961316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_6946740_6951911_6952178_6954804_6954995_6955150_6955268_6955371_6955486_6955659_6955757_6956141_6956222_6956418_6956569_6957653_6957786_6957918_6958074_6959926_6959995_6960087_6960240_6960343_6960436_6960805_6960946_6961125
transcript_42493.nic	chr12	+	2044	15	NIC	ENSG00000111679.17	novel	2159	16	NA	NA	-5	0	intron_retention	FALSE	canonical	2	6	junction_1	35.3839725045688	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGCCTCTGAGCCCTTTG	6945105	True	NA	10	True	AATAAA	-18	NA	6946568	6961316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_6946740_6951982_6952178_6954804_6954995_6955150_6955268_6955371_6955486_6955659_6955757_6956141_6956222_6956418_6956569_6957653_6957786_6957918_6958074_6959926_6959995_6960087_6960240_6960343_6960436_6960805_6960946_6961125
transcript_42496.known	chr12	+	2161	16	FSM	ENSG00000111679.17	ENST00000318974.14	2161	16	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	34.694860330218	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGCCTCTGAGCCCTTTG	6951338	False	NA	10	True	AATAAA	-18	NA	6951355	6961316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6951521_6951608_6951732_6951982_6952178_6954804_6954995_6955150_6955268_6955371_6955486_6955659_6955757_6956141_6956222_6956418_6956569_6957653_6957786_6957918_6958074_6959926_6959995_6960087_6960240_6960343_6960436_6960805_6960946_6961125
transcript_42499.known	chr12	-	1379	10	FSM	ENSG00000215021.10	ENST00000535923.6	1379	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	647.666237776492	2054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTAACTGGCAGCAAGCA	-6940497	True	NA	22	True	NA	NA	NA	6970664	6965326	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6965713_6965910_6965917_6966423_6966501_6967170_6967249_6967675_6967780_6967891_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
transcript_42505.known	chr12	-	1354	9	FSM	ENSG00000215021.10	ENST00000440277.6	1354	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	742.497306392421	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTAACTGGCAGCAAGCA	-6970737	False	NA	22	True	NA	NA	NA	6970753	6965326	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6965713_6965910_6965917_6966423_6966501_6967170_6967239_6967891_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
transcript_42511.known	chr12	-	1518	9	FSM	ENSG00000215021.10	ENST00000543465.5	1518	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	669.670243011439	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGGCTTCACGTGTTCA	-6970700	False	NA	-3	True	AATAAA	-21	NA	6970716	6965351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6965713_6965910_6965917_6966423_6966501_6967170_6967249_6967675_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
transcript_42513.known	chr12	-	1735	9	FSM	ENSG00000215021.10	ENST00000677354.1	1735	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	674.540955020524	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGGCTTCACGTGTTCA	-6940451	True	NA	-3	True	AATAAA	-21	NA	6970618	6965351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6965713_6965910_6965917_6966423_6966501_6967170_6967780_6967891_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
transcript_42520.known	chr12	-	1391	8	FSM	ENSG00000215021.10	ENST00000676496.1	1391	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	702.728850079954	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGGCTTCACGTGTTCA	-6970708	False	NA	-3	True	AATAAA	-21	NA	6970724	6965351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6965713_6966423_6966501_6967170_6967336_6967891_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
transcript_42546.known	chr12	-	1706	5	FSM	ENSG00000215021.10	ENST00000676893.1	1706	5	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_2	648.068862081801	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATACAAAAGATAATGAGCC	-6940517	True	NA	NA	False	ACTAAA	-1	NA	6970684	6966925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6968022_6968410_6968588_6969497_6969578_6970195_6970281_6970416
transcript_42556.known	chr12	-	2235	13	FSM	ENSG00000111684.11	ENST00000261407.9	2235	13	0	0	0	0	multi-exon	FALSE	canonical	3	547	junction_4	52.9897133623331	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTAGCATTCCTGACTGC	-7008809	True	NA	-8	True	GATAAA	-27	NA	7018476	6976184	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6976892_6977133_6977263_6977366_6977526_6977597_6977746_6978340_6978508_6978602_6978690_6979470_6979580_6981003_6981183_6981594_6981633_6981810_6981905_6982675_6982783_6983431_6983540_7018273
transcript_42559.known	chr12	+	2682	12	FSM	ENSG00000182326.16	ENST00000360817.10	2682	12	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	8.23618302029536	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTGACTTACCTCAT	7060530	True	NA	6	True	AATAAA	-18	NA	7060717	7071032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_7060878_7061838_7061918_7062474_7062683_7062889_7063068_7064266_7064393_7065099_7065300_7065816_7065971_7066517_7066634_7067038_7067118_7067642_7067772_7068455_7068531_7069854
transcript_42560.known	chr12	+	2972	12	FSM	ENSG00000182326.16	ENST00000328916.7	2972	12	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_4	6.81999975764038	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTGACTTACCTCAT	NA	False	NA	6	True	AATAAA	-18	NA	7060514	7071032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_7060878_7061751_7061918_7062474_7062683_7062889_7063068_7064266_7064393_7065099_7065300_7065816_7065971_7066517_7066634_7067038_7067118_7067642_7067772_7068455_7068531_7069854
transcript_42577.known	chr12	-	2902	11	FSM	ENSG00000111684.11	ENST00000535479.5	2902	11	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_6	50.0795367390714	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTAGCATTCCTGACTG	-7008810	True	NA	-9	True	GATAAA	-26	NA	7018477	6976185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_6976892_6977133_6977263_6977366_6978508_6978602_6978690_6979470_6979580_6981003_6981183_6981594_6981633_6981810_6981905_6982675_6982783_6983431_6983540_7018273
transcript_42583.known	chr12	+	4873	6	FSM	ENSG00000126749.16	ENST00000599672.6	4873	6	0	0	0	0	multi-exon	FALSE	canonical	3	617	junction_4	41.2960046493604	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCCTTCATTTCTTGG	6957764	True	NA	4	True	AATAAA	-16	NA	6970912	6979936	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6971092_6974338_6974441_6974551_6974694_6975089_6975149_6975228_6975379_6975695
transcript_42588.known	chr12	+	616	5	FSM	ENSG00000126749.16	ENST00000539196.2	616	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_4	281.964980095047	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTTGTTTTGGGGTTCC	6957912	False	NA	NA	False	NA	NA	NA	6971060	6975977	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_6971092_6974338_6974441_6974551_6974694_6975089_6975149_6975695
transcript_42590.known	chr12	-	1881	10	FSM	ENSG00000159403.18	ENST00000648162.1	1881	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_9	12.5560471880148	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTGCTGGACACCCA	-7090326	False	466	NA	False	AAAACA	-1	NA	7090792	7080740	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_7081302_7082031_7082107_7085860_7086017_7086378_7086458_7088609_7088732_7088838_7088987_7089292_7089490_7089586_7089734_7090055_7090249_7090589
transcript_42591.known	chr12	-	3335	6	FSM	ENSG00000139178.12	ENST00000266542.9	3335	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	4.96386945839634	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATGTGTATGTCTAGA	-7108480	True	NA	-3	True	AATATA	-13	NA	7109214	7094553	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_7097164_7099685_7099761_7099900_7100027_7101897_7102088_7108250_7108480_7109109
transcript_42594.known	chr12	-	592	5	FSM	ENSG00000139178.12	ENST00000543933.5	592	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.33853912601566	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTCACCCCCATTGCCC	-7108463	True	NA	NA	False	NA	NA	NA	7109197	7097153	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_7097164_7099685_7099761_7101897_7102088_7108250_7108480_7109109
transcript_42597.known	chr12	-	813	3	FSM	ENSG00000139178.12	ENST00000545337.1	813	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGACTCAGATTTGTTTT	-7108476	True	NA	0	True	AGTAAA	-17	NA	7109210	7101604	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_7102088_7108250_7108480_7109109
transcript_42599.known	chr12	-	354	2	FSM	ENSG00000139178.12	ENST00000539927.1	354	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCATGTAGGGGCAGTCG	-7108394	False	NA	NA	False	NA	NA	NA	7109128	7108144	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_7108480_7109109
transcript_42606.nnic	chr12	+	3600	19	NNC	ENSG00000139182.15	novel	4013	18	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_18	21.88049754552	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGAGGCGCCTCCTG	7129150	True	NA	NA	False	AATAAA	-22	NA	7130370	7158945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_7130713_7133023_7133147_7133572_7133769_7135326_7135536_7135803_7135954_7136205_7136392_7136828_7137111_7137954_7138068_7141241_7141405_7142085_7142140_7142868_7143027_7143162_7143312_7148971_7149199_7149522_7149694_7150543_7150690_7150927_7151064_7157488_7157692_7157940_7158105_7158517
transcript_42609.known	chr12	+	4013	18	FSM	ENSG00000139182.15	ENST00000266546.11	4013	18	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_4	12.2389700360468	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGAGGCGCCTCCTG	7129150	True	NA	NA	False	AATAAA	-22	NA	7130370	7158945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_7130713_7133023_7133147_7133572_7133769_7135326_7135536_7135803_7135954_7136205_7136392_7136828_7137111_7137954_7138068_7141241_7141405_7142085_7142140_7142868_7143027_7143162_7143312_7148971_7149199_7149522_7149694_7150543_7150690_7150927_7151064_7157488_7157692_7157940
transcript_42625.known	chr12	+	3237	16	FSM	ENSG00000139197.11	ENST00000675855.1	3237	16	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	25.4235236652112	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGGAACTGATGTGGGT	7187069	True	NA	16	True	AATAAA	-25	NA	7189685	7211459	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_7189751_7190361_7190525_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202240_7202352_7202611_7202705_7203431_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
transcript_42629.known	chr12	+	3252	15	FSM	ENSG00000139197.11	ENST00000266563.9	3252	15	0	0	0	0	multi-exon	TRUE	canonical	3	44	junction_1	21.4966774841403	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGCTGGTCATGAAGCT	NA	False	NA	40	True	AATAAA	-21	NA	7189583	7211483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_7189751_7190361_7190525_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202611_7202705_7203431_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
transcript_42633.known	chr12	+	2253	16	FSM	ENSG00000139197.11	ENST00000434354.6	2253	16	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	31.4461797715115	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTAATTCAAGGGCTGT	7187070	True	NA	NA	False	NA	NA	NA	7189686	7210431	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_7189751_7190361_7190570_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202240_7202352_7202611_7202705_7203431_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
transcript_42635.known	chr12	+	2105	16	FSM	ENSG00000139197.11	ENST00000412720.6	2105	16	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	32.1821206400214	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGGATCCCCGCTTTGGA	7189834	False	NA	NA	False	NA	NA	NA	7189844	7210256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_7189981_7190361_7190525_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202240_7202352_7202611_7202705_7203431_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
transcript_42637.known	chr12	+	2477	16	FSM	ENSG00000139197.11	ENST00000420616.6	2477	16	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	26.1559426007424	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCCGCTTTGGATGTGAT	7187098	True	NA	NA	False	NA	NA	NA	7189714	7210262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_7190217_7190361_7190525_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202240_7202352_7202611_7202705_7203431_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
transcript_42644.nic	chr12	+	3107	15	NIC	ENSG00000139197.11	novel	3237	16	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_8	32.1886182191337	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGGAACTGATGTGGGT	7187064	True	NA	16	True	AATAAA	-25	NA	7189680	7211459	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_7189751_7190361_7190525_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202611_7202705_7203455_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
transcript_42647.nic	chr12	+	3176	15	NIC	ENSG00000139197.11	novel	3237	16	NA	NA	-5	0	combination_of_known_junctions	TRUE	canonical	3	24	junction_2	29.5356063221381	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGGAACTGATGTGGGT	7187064	True	NA	16	True	AATAAA	-25	NA	7189680	7211459	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_7189751_7190361_7190570_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202611_7202705_7203431_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
transcript_42650.nic	chr12	+	3575	15	NIC	ENSG00000139197.11	novel	3237	16	NA	NA	-4	0	intron_retention	FALSE	canonical	3	39	junction_1	22.4844617549134	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGGAACTGATGTGGGT	7187086	True	NA	16	True	AATAAA	-25	NA	7189702	7211459	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_7190217_7190361_7190525_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202611_7202705_7203431_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
transcript_42663.known	chr12	-	1236	2	FSM	ENSG00000184344.4	ENST00000329913.4	1236	2	0	0	0	0	multi-exon	FALSE	canonical	3	460	junction_1	0	202	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACCTGTGTTTATAATTT	-7689619	True	NA	15	True	AATAAA	-42	NA	7695775	7689783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_7690705_7695460
transcript_42664.known	chr12	+	1100	4	FSM	ENSG00000187569.3	ENST00000345088.3	1100	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	2.49443825784929	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCTTGATTTTATTCTT	7710735	True	NA	NA	False	AATAAA	-27	NA	7711432	7717559	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_7711653_7715182_7715428_7716197_7716240_7716966
transcript_42666.known	chr12	+	836	6	FSM	ENSG00000111704.11	ENST00000541267.5	836	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	432.060366152694	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACATCCAGTCCTGGAGC	7787382	True	NA	NA	False	NA	NA	NA	7787793	7794808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_7787844_7788418_7788579_7789619_7789766_7792949_7793213_7794456_7794544_7794678
transcript_42689.known	chr12	+	5182	4	FSM	ENSG00000111704.11	ENST00000229307.9	5182	4	0	0	0	0	multi-exon	FALSE	canonical	3	694	junction_3	122.158367157828	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGTTAAGCATCTGAGAA	7786224	True	NA	31	True	AATAAA	-19	NA	7789401	7799146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_7789766_7792949_7793213_7794456_7794544_7794678
transcript_42691.known	chr12	+	870	4	FSM	ENSG00000111704.11	ENST00000526286.1	870	4	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_3	404.626576817028	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGAGTGAAACTGATATT	7789567	False	NA	NA	False	NA	NA	NA	7789614	7795095	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_7789766_7792949_7793213_7794456_7794544_7794726
transcript_42694.nic	chr12	+	2122	4	NIC	ENSG00000111704.11	novel	5182	4	NA	NA	-62	967	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	377.784182952237	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGTTAAATTTTTGGTT	7786162	True	NA	91	True	AGTAAA	-20	NA	7789339	7796062	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_7789766_7792987_7793213_7794456_7794544_7794678
transcript_4270.nic	chr1	+	1613	12	ISM	ENSG00000004487.18	ENST00000400181.9	3085	21	-71	14538	-46	-7419	5prime_fragment	FALSE	canonical	0	0	junction_9	1148.76394945622	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAATTCTGTATTTTCTT	22987729	True	NA	50	True	NA	NA	NA	23019396	23069151	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_23019948_23030468_23030635_23044426_23044487_23050386_23050521_23053760_23053840_23055068_23055162_23055931_23056039_23057483_23057566_23059072_23059168_23066059_23066072_23068538_23068682_23069060
transcript_42701.nic	chr12	-	3487	11	NIC	ENSG00000173262.12	novel	3462	11	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_10	234.58527234249	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCACAAGCACATTATTTA	-7872978	True	NA	-5	True	AATAAA	-19	NA	7873152	7812513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_7814535_7817830_7818035_7819481_7819584_7821220_7821326_7827494_7827683_7828703_7828867_7829765_7830007_7831603_7831765_7832721_7832815_7869862_7869938_7873018
transcript_42711.nic	chr12	+	1700	4	ISM	ENSG00000176654.12	ENST00000607111.2	1982	6	1579	603	-196	-603	intron_retention	FALSE	canonical	3	18	junction_1	13.1993265821489	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAAATTGGTGTGATGAA	7892243	True	NA	NA	False	AATAAA	-2	NA	7892379	7899537	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_7892727_7895476_7895740_7898264_7898352_7898534
transcript_42719.known	chr12	-	3827	10	FSM	ENSG00000059804.16	ENST00000075120.12	3827	10	0	0	0	0	multi-exon	FALSE	canonical	3	2864	junction_5	185.662444263444	1484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATGGGCTTATTTACTT	-7899769	True	NA	-12	True	AATAAA	-19	NA	7936187	7919229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_7921632_7922820_7923025_7924409_7924512_7925843_7925949_7929683_7929872_7930479_7930643_7931244_7931486_7932986_7933148_7933809_7933903_7936019
transcript_42731.known	chr12	-	4414	9	FSM	ENSG00000059804.16	ENST00000486749.5	4414	9	0	0	0	0	multi-exon	FALSE	canonical	3	2923	junction_6	179.343943304479	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTATGGGCTTATTTACT	-7899749	True	NA	-13	True	AATAAA	-18	NA	7936167	7919230	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_7921632_7922820_7923025_7924409_7924512_7925843_7925949_7929683_7930643_7931244_7931486_7932986_7933148_7933809_7933903_7936019
transcript_42745.known	chr12	-	1784	5	FSM	ENSG00000059804.16	ENST00000495813.5	1784	5	0	0	0	0	multi-exon	FALSE	canonical	3	2923	junction_2	184.80936123476	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGAGTGAGACTGTGTCT	-7899751	True	NA	NA	False	NA	NA	NA	7936169	7929503	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_7930643_7931244_7931486_7932986_7933148_7933809_7933903_7936019
transcript_42753.known	chr12	+	5524	11	FSM	ENSG00000065970.9	ENST00000162391.8	5524	11	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_6	9.80866963456309	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTACTGGTAGTGGTCTCA	8031778	True	NA	37	True	AATAAA	-28	NA	8032715	8055517	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_8033834_8039818_8040166_8042657_8042733_8043700_8043770_8043950_8044092_8044759_8044959_8047881_8048290_8048696_8048799_8049361_8049572_8050521_8050621_8052761
transcript_42754.nnic	chr12	-	1052	2	Antisense	novelGene_ENSG00000065970.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	12	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTTCCTTGTTTCAGC	-8033074	True	NA	-1	True	AATAAA	-16	NA	8033484	8032131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr12_-_8033035_8033335
transcript_42760.known	chr12	+	2634	8	FSM	ENSG00000089818.18	ENST00000339754.11	2634	8	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_5	27.2598980338578	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGCTTTTAAGAAGTTGA	8080055	True	NA	130	True	AATAAA	-30	NA	8082273	8097881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_8082384_8089935_8090037_8090194_8090300_8091768_8091851_8092675_8092785_8092871_8093056_8095600_8095704_8096041
transcript_42762.known	chr12	+	2578	7	FSM	ENSG00000089818.18	ENST00000639071.1	2578	7	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_2	20.204509947589	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAATAATGGTAATTAAAAA	8080055	True	NA	-13	True	TATAAA	-18	NA	8082273	8097738	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_8082384_8089935_8090037_8090194_8090300_8091768_8091851_8092675_8093056_8095600_8095704_8096041
transcript_42763.known	chr12	+	2446	7	FSM	ENSG00000089818.18	ENST00000450991.6	2446	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	86.5051379334713	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTTTTATCTTTTAAT	8080049	True	NA	18	True	ATTAAA	-14	NA	8082267	8097769	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_8082384_8089935_8090037_8090194_8090300_8092675_8092785_8092871_8093056_8095600_8095704_8096041
transcript_42764.known	chr12	+	5166	6	FSM	ENSG00000089818.18	ENST00000640648.1	5166	6	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_3	27.938503896952	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATGGTAATTAAAAATA	NA	False	NA	-11	True	TATAAA	-20	NA	8081894	8097740	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_8082384_8089935_8090037_8090194_8092785_8092871_8093056_8095600_8095704_8096041
transcript_42765.known	chr12	+	2517	8	FSM	ENSG00000089818.18	ENST00000638237.1	2517	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	88.6695309240199	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTCTTTTATCTTTTAA	8080047	True	NA	17	True	ATTAAA	-13	NA	8082265	8097768	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_8082384_8089935_8090037_8090194_8090300_8091768_8091851_8092675_8092785_8092871_8093044_8095600_8095704_8096041
transcript_42769.known	chr12	-	662	2	FSM	ENSG00000226091.7	ENST00000420040.2	662	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGCTCCTGGATGCAG	-8389875	False	NA	0	True	TATAAA	-23	NA	8390752	8356962	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_8357142_8390269
transcript_4277.nic	chr1	+	1543	10	ISM	ENSG00000004487.18	ENST00000692975.1	3793	18	-48	14481	-48	-7419	5prime_fragment	FALSE	canonical	3	1953	junction_2	329.403988522181	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAATTCTGTATTTTCTT	23019377	False	NA	50	True	NA	NA	NA	23019394	23069151	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_23019948_23030468_23030635_23050386_23050521_23053760_23053840_23055068_23055162_23055931_23056039_23057483_23057566_23059072_23059168_23068538_23068682_23069060
transcript_42770.nnic	chr12	-	569	2	NNC	ENSG00000226091.7	novel	3033	5	NA	NA	0	-11298	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGCCA	-8395926	False	NA	NA	False	NA	NA	NA	8396803	8395414	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_8395603_8396422
transcript_42777.nnic	chr12	+	2122	10	NNC	ENSG00000166532.16	novel	1519	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_6	386.534204641743	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACATAGCATGCCGTG	8687010	True	NA	25	True	AATAAA	-16	NA	8697921	8783085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_8698298_8713810_8714042_8749861_8750093_8751956_8752044_8753889_8754094_8773320_8773467_8776766_8777062_8777589_8777803_8780574_8780740_8782911
transcript_42781.nic	chr12	+	1831	9	NIC	ENSG00000166532.16	novel	1519	8	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_6	385.836408825036	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACATAGCATGCCGTG	8687006	True	NA	25	True	AATAAA	-16	NA	8697917	8783085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_8698298_8713810_8714042_8749861_8750093_8751956_8752044_8753889_8754094_8773320_8773467_8777589_8777803_8780574_8780740_8782911
transcript_42782.known	chr12	+	5830	7	FSM	ENSG00000166532.16	ENST00000357529.7	5830	7	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_1	140.670319857776	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTGACTGCTTGCTTGC	8687010	True	NA	10	True	AATATA	-21	NA	8697921	8777191	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_8698298_8699784_8700615_8713810_8714042_8749861_8750093_8751956_8752044_8753889_8754094_8773320
transcript_42785.nic	chr12	+	3485	6	ISM	ENSG00000166532.16	ENST00000544257.5	1589	9	-204	7375	-113	-1470	5prime_fragment	FALSE	canonical	3	24	junction_1	113.695030674168	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGTGAAAGGTTGATTGT	8681049	True	NA	8	True	AATAAA	-36	NA	8681486	8775720	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_8681819_8713810_8714042_8749861_8750093_8751956_8752044_8753889_8754094_8773320
transcript_42787.known	chr12	+	4931	6	FSM	ENSG00000166532.16	ENST00000535829.6	4931	6	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_1	36.6464186517591	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTGACTGCTTGCTTGC	8687079	True	NA	10	True	AATATA	-21	NA	8697990	8777191	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_8698298_8713810_8714042_8749861_8750093_8751956_8752044_8753889_8754094_8773320
transcript_42793.known	chr12	+	1893	2	FSM	ENSG00000166532.16	ENST00000504495.6	1893	2	0	0	0	0	multi-exon	FALSE	canonical	3	1379	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCCGTGTGACTTGTTC	8779016	False	NA	35	True	AATAAA	-26	NA	8779030	8783095	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_8780740_8782911
transcript_42820.known	chr12	+	4292	16	FSM	ENSG00000111752.11	ENST00000543824.5	4292	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1298.55075458074	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGATGGTTTTTTTTCTTC	8913990	False	NA	27	True	NA	NA	NA	8914552	8940404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_8914828_8916060_8916070_8917629_8917792_8919755_8919867_8920984_8921066_8921600_8921751_8922632_8922789_8930434_8930928_8932562_8933351_8933864_8934013_8934266_8934479_8935123_8935239_8936855_8936965_8937175_8937327_8937828_8938061_8939304
transcript_42839.known	chr12	+	5390	15	FSM	ENSG00000111752.11	ENST00000544916.6	5390	15	0	0	0	0	multi-exon	FALSE	canonical	3	2546	junction_5	486.967820459695	799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTGAAAATGTGTTTAAA	8913946	False	NA	18	True	ATTAAA	-21	NA	8914508	8941467	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_8914828_8917629_8917792_8919755_8919867_8920984_8921066_8921600_8921751_8922632_8922789_8930434_8930928_8932562_8933351_8933864_8934013_8934266_8934479_8935123_8935239_8936855_8936965_8937175_8937327_8937828_8938061_8939304
transcript_4286.known	chr1	-	1190	4	FSM	ENSG00000169641.14	ENST00000471849.5	1190	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	29.6797723860694	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCAGAAAATGAAAAGAA	-23163217	True	NA	NA	False	AAGAAA	-2	NA	23168845	23093442	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23094381_23109021_23109128_23109584_23109651_23168765
transcript_4289.known	chr1	-	8898	5	FSM	ENSG00000169641.14	ENST00000302291.8	8898	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	43.9118435049133	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCAGACTTTGTTTCAGC	NA	False	NA	-17	True	AATAAA	-20	NA	23177808	23084029	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23089054_23091189_23094381_23109021_23109128_23168765_23169025_23177490
transcript_42921.known	chr12	+	618	6	FSM	ENSG00000111752.11	ENST00000538657.5	618	6	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_1	1325.67875444996	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCAACTCATCCTGATGC	8910925	False	NA	NA	False	NA	NA	NA	8913895	8922691	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_8913951_8917629_8917792_8919755_8919867_8920984_8921066_8921600_8921751_8922632
transcript_42922.known	chr12	+	641	6	FSM	ENSG00000111752.11	ENST00000544539.5	641	6	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_5	1421.43837010262	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTGGCTGCAGTCCAGCAG	8895565	True	NA	NA	False	NA	NA	NA	8914772	8922720	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_8914828_8917629_8917792_8919755_8919867_8920984_8921066_8921600_8921751_8922638
transcript_42926.known	chr12	+	809	3	FSM	ENSG00000249790.3	ENST00000540299.1	809	3	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	5.5	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGGAACCCAAAATGAGT	8788263	False	NA	NA	False	NA	NA	NA	8788273	8794336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_8788787_8789999_8790264_8794304
transcript_42930.known	chr12	+	723	2	FSM	ENSG00000249790.3	ENST00000422780.3	723	2	0	0	0	0	multi-exon	FALSE	canonical	3	1566	junction_1	0	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATTCCCAACAGCAGTT	8788246	False	NA	NA	False	NA	NA	NA	8788256	8794497	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_8788787_8794304
transcript_42931.known	chr12	+	1972	2	FSM	ENSG00000249790.3	ENST00000514568.2	1972	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGGGTCCATGCTGCT	8788263	False	NA	NA	False	AATAAA	-16	NA	8788273	8795789	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_8788761_8794304
transcript_42932.known	chr12	-	2450	7	FSM	ENSG00000003056.8	ENST00000000412.8	2450	7	0	0	0	0	multi-exon	FALSE	canonical	3	806	junction_1	40.0444197804832	1115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCCTTGTCATTTGTGTG	-8936371	True	NA	NA	False	ATTAAA	-17	NA	8949645	8940360	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_8941941_8942415_8942543_8943404_8943536_8943800_8943911_8945417_8945585_8946228_8946406_8949487
transcript_42933.known	chr12	-	648	3	FSM	ENSG00000003056.8	ENST00000540837.1	648	3	0	0	0	0	multi-exon	FALSE	canonical	3	841	junction_2	20	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGACAGTTGTGCATTAA	-8936336	True	NA	NA	False	AATATA	-43	NA	8949610	8945236	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_8945585_8946228_8946406_8949487
transcript_42936.known	chr12	+	592	5	FSM	ENSG00000139187.10	ENST00000539240.5	592	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	11.0989864402116	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATGCGGTGCCATCAAC	8949284	True	NA	NA	False	NA	NA	NA	8950043	9009448	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_8950237_8992205_8992311_8995118_8995289_9008974_9009076_9009425
transcript_42939.known	chr12	+	427	4	FSM	ENSG00000139187.10	ENST00000544226.5	427	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	8.9938250421547	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAGAAGGTCAGACTTTG	8949347	True	NA	NA	False	NA	NA	NA	8950106	9009516	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_8950237_8992205_8992311_9008974_9009076_9009425
transcript_42942.known	chr12	+	2472	2	FSM	ENSG00000237248.5	ENST00000427111.4	2472	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGCTCTCTCTAAGATGA	NA	False	NA	NA	False	AATAAA	-22	NA	9240002	9243052	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_9240540_9241117
transcript_43.known	ERCC-00112	+	1120	1	FSM	ERCC-00112A	DQ459422	1120	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00112_+_0_1100
transcript_4303.known	chr1	-	3319	2	FSM	ENSG00000179546.5	ENST00000374619.2	3319	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGTCTTTGGGTGATTT	-23217007	True	NA	NA	False	AATAAA	-22	NA	23217502	23191894	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23195002_23217290
transcript_4304.nnic	chr1	-	3201	2	NNC	ENSG00000179546.5	novel	3319	2	NA	NA	-55	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGTCTTTGGGTGATTT	-23217062	True	NA	NA	False	AATAAA	-22	NA	23217557	23191894	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_23195002_23217463
transcript_4309.known	chr1	-	2691	11	FSM	ENSG00000125944.21	ENST00000374616.7	2691	11	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	538.40635211706	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATTTCAAATTCAATTGT	-23319147	True	NA	-14	True	AATAAA	-26	NA	23344310	23309782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23311067_23311200_23311323_23313552_23313703_23318482_23318698_23321527_23321664_23323555_23323733_23333517_23333632_23337753_23337862_23338489_23338609_23340851_23341018_23344210
transcript_4310.known	chr1	-	2694	11	FSM	ENSG00000125944.21	ENST00000374612.5	2694	11	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_10	387.929323459828	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCTATTTCAAATTCAAT	-23319159	True	NA	-17	True	AATAAA	-23	NA	23344322	23309785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23311067_23311200_23311323_23313552_23313703_23318482_23318689_23321527_23321664_23323555_23323733_23333517_23333632_23337753_23337862_23338489_23338609_23340851_23341021_23344210
transcript_43103.known	chr12	+	2612	4	FSM	ENSG00000256594.9	ENST00000575094.5	2612	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	9.39266853573691	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGGAAGCATTTGCTT	9647529	False	NA	NA	False	GATAAA	-16	NA	9648046	9658412	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_9648934_9653682_9653809_9655872_9655980_9656920
transcript_43107.known	chr12	+	1883	4	FSM	ENSG00000139112.11	ENST00000266458.10	1883	4	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_1	10.3708994574027	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACTGAGTTCAGCAATGT	10206250	True	NA	20	True	AATAAA	-21	NA	10212876	10223128	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_10213220_10218062_10218142_10220439_10220559_10221786
transcript_43108.known	chr12	+	2294	4	FSM	ENSG00000139112.11	ENST00000546017.5	2294	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	144.529120479807	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCCACTGAGTTCAGC	10213414	True	NA	15	True	AATAAA	-16	NA	10213428	10223123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_10214188_10218062_10218142_10220439_10220559_10221786
transcript_43109.known	chr12	+	379	2	FSM	ENSG00000139112.11	ENST00000629504.1	379	2	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGATCACCTGGTACCT	10206256	True	NA	NA	False	GGGGCT	-32	NA	10212882	10213877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_10213220_10213835
transcript_4311.known	chr1	-	7646	10	FSM	ENSG00000125944.21	ENST00000478691.5	7646	10	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	495.827354461307	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTTGGTGATTTTGG	-23319173	True	NA	0	True	AATAAA	-18	NA	23344336	23304687	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23311067_23311200_23311323_23313552_23313703_23318482_23318698_23321527_23321664_23323555_23323733_23333517_23333632_23337753_23337862_23338489_23338609_23344210
transcript_43112.known	chr12	-	1057	6	FSM	ENSG00000111196.10	ENST00000544850.5	1057	6	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	349.563155953255	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGAGTAGTTTTTTGT	-10607543	True	NA	-10	True	AATAAA	-16	NA	10613594	10606012	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_10606375_10607853_10607937_10609097_10609384_10609830_10609942_10610621_10610681_10613438
transcript_43113.known	chr12	-	868	6	FSM	ENSG00000111196.10	ENST00000545236.5	868	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_5	353.587669468266	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTTCAGGCTGTTTGTA	-10607558	True	NA	-1	True	ATTAAA	-15	NA	10613609	10606269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_10606375_10607853_10607937_10609830_10609942_10610621_10610681_10612639_10612979_10613438
transcript_43115.known	chr12	-	2606	5	FSM	ENSG00000111196.10	ENST00000320756.7	2606	5	0	0	0	0	multi-exon	FALSE	canonical	3	763	junction_2	10.4522724801834	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTTTTTCCAAGTACT	-10607558	True	NA	NA	False	AATAAA	-18	NA	10613609	10604192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_10606375_10607853_10607937_10609830_10609942_10610621_10610681_10613438
transcript_43116.known	chr12	-	559	3	FSM	ENSG00000111196.10	ENST00000544176.1	559	3	0	0	0	0	multi-exon	FALSE	canonical	3	764	junction_1	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCCCAGCCAACGTTAGG	-10607549	True	NA	NA	False	NA	NA	NA	10613600	10609603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_10609942_10610621_10610681_10613438
transcript_43119.known	chr12	-	2771	11	FSM	ENSG00000060140.9	ENST00000075503.8	2771	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_9	5.20096144957834	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGGACCTTTCATATATT	-10674011	True	NA	-4	True	AATAAA	-32	NA	10674052	10618922	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_10620349_10621875_10621973_10622637_10622679_10624650_10624860_10627640_10627725_10629492_10629675_10631044_10631309_10633989_10634125_10634566_10634687_10637070_10637197_10673965
transcript_43145.known	chr12	-	1931	10	FSM	ENSG00000060138.13	ENST00000228251.9	1931	10	0	0	0	0	multi-exon	FALSE	canonical	3	2938	junction_3	474.501713951815	3270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAATGTTTAATGGGAGTG	-10723309	False	NA	-30	True	AATAAA	-20	NA	10723323	10699088	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_10699655_10701253_10701354_10701959_10702135_10704050_10704149_10709907_10710115_10713210_10713334_10715693_10715784_10718087_10718122_10719079_10719144_10722849
transcript_43157.known	chr12	-	1708	9	FSM	ENSG00000060138.13	ENST00000279550.11	1708	9	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_4	1224.02264582809	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAATGTTTAATGGGAGTG	-10723293	False	NA	-30	True	AATAAA	-20	NA	10723307	10699088	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_10699655_10701253_10701354_10701959_10702135_10704050_10704149_10713210_10713334_10715693_10715784_10718087_10718122_10719079_10719144_10722849
transcript_43168.nic	chr12	-	800	3	ISM	ENSG00000231887.8	ENST00000541977.5	507	5	-70	90697	-6	0	5prime_fragment	FALSE	canonical	3	28	junction_1	28.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATTAAAAAGAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	11171614	10973283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_10973722_11047019_11047189_11171421
transcript_43173.known	chr12	-	1662	5	FSM	ENSG00000212127.6	ENST00000381852.4	1662	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	34.5714839137692	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTTGCTGTTTATTA	NA	False	NA	NA	False	AATAAA	-20	NA	11171573	10937407	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_10938578_10973654_10973722_11034781_11034886_11047019_11047189_11171421
transcript_43174.known	chr12	+	4823	1	FSM	ENSG00000256537.5	ENST00000622602.2	4823	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATTTTATGGTATTTTTT	NA	False	NA	8	True	AATAAA	-20	NA	11171193	11176016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_11171200_11176000
transcript_43175.known	chr12	+	6144	8	FSM	ENSG00000139083.11	ENST00000396373.9	6144	8	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	8.03563492024299	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATTTTTTATAAAAAAAA	11649541	True	NA	NA	False	AAGAAA	-24	NA	11649673	11895377	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_11650161_11752449_11752580_11839139_11839305_11853426_11853562_11869423_11869970_11884444_11884588_11885925_11886027_11890940
transcript_43178.known	chr12	+	1897	6	FSM	ENSG00000121380.12	ENST00000308721.9	1897	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.99332590941915	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTCTTCTGATTAGTAA	12070922	True	NA	NA	False	AATAAA	-25	NA	12070938	12099695	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_12071138_12079298_12079739_12087212_12087387_12090778_12090850_12094663_12094931_12098949
transcript_43179.known	chr12	-	10252	23	FSM	ENSG00000070018.9	ENST00000261349.9	10252	23	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_13	21.2805444067565	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGTCCTTTCTTTTCA	-12260868	True	NA	NA	False	AATAAA	-18	NA	12267044	12116024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_12121421_12124564_12124663_12125295_12125433_12126690_12126922_12130782_12130894_12131820_12132058_12135174_12135301_12138324_12138535_12147365_12147557_12148941_12149154_12150835_12151039_12158828_12159156_12159779_12159965_12162192_12162420_12164272_12164563_12165078_12165296_12179809_12179982_12181042_12181440_12183979_12184112_12186922_12187120_12203202_12203401_12244261_12244656_12266680
transcript_43186.nic	chr12	-	2471	6	ISM	ENSG00000070018.9	ENST00000543091.1	4774	23	-262	59148	13	6565	5prime_fragment	FALSE	canonical	3	115	junction_4	8.61626369141521	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGTAAAACTGTAATCTCA	-12260855	True	NA	NA	False	TTTAAA	-18	NA	12267031	12180240	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_12181440_12183979_12184112_12186922_12187120_12203202_12203401_12244261_12244656_12266680
transcript_43191.known	chr12	-	2220	5	FSM	ENSG00000111261.14	ENST00000396349.3	2220	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	22.9891278651453	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGTGTTCTCATAAGTAG	-12350055	True	NA	-26	True	AATAAA	-14	NA	12350241	12329264	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_12330959_12338419_12338561_12343091_12343174_12343275_12343415_12350077
transcript_43192.known	chr12	-	5532	4	FSM	ENSG00000111261.14	ENST00000535902.6	5532	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	5.35412613473634	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGAGTATTCTATGATTTA	-12350056	True	NA	NA	False	AATAAA	-25	NA	12350242	12326055	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_12330959_12338419_12338561_12343091_12343415_12350077
transcript_43195.known	chr12	+	580	4	FSM	ENSG00000165714.11	ENST00000542728.5	580	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	37.1154355431208	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGCCTGCCTGGGGCTGGG	12355246	True	NA	NA	False	NA	NA	NA	12357078	12465783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_12357119_12361205_12361350_12435627_12435786_12465545
transcript_43197.known	chr12	+	6422	4	FSM	ENSG00000165714.11	ENST00000314565.9	6422	4	0	0	0	0	multi-exon	TRUE	canonical	3	89	junction_2	2.86744175568088	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTCCAGGACAATGCTG	12355245	True	NA	NA	False	AATAAA	-27	NA	12357077	12471233	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_12357510_12361205_12361350_12435627_12435786_12465545
transcript_43199.known	chr12	+	554	3	FSM	ENSG00000165714.11	ENST00000543990.1	554	3	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	2	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGATTGCTTTTTCCCAGC	12357347	False	NA	NA	False	NA	NA	NA	12357357	12435885	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_12357510_12361205_12361350_12435627
transcript_4320.known	chr1	-	1837	9	FSM	ENSG00000125944.21	ENST00000606561.5	1837	9	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_6	471.869536392211	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCTGAAGAAATCACTATT	-23319132	True	NA	NA	False	NA	NA	NA	23344295	23310332	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23311067_23311200_23311323_23313552_23313703_23318482_23318689_23321527_23321664_23323555_23323733_23337753_23337862_23338489_23338609_23344210
transcript_43200.known	chr12	+	549	3	FSM	ENSG00000165714.11	ENST00000298571.6	549	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	48	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATATCATCTGACCAGGTC	12357407	False	NA	NA	False	GGGGCT	-45	NA	12357417	12465844	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_12357510_12435627_12435786_12465545
transcript_43205.known	chr12	-	6661	7	FSM	ENSG00000111266.9	ENST00000298573.9	6661	7	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_6	12.0196598214019	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAGGGGAGGCTGGGGGC	-12561889	True	NA	NA	False	ATTAAA	-2	NA	12562863	12473281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_12478016_12480222_12480347_12487027_12487188_12500518_12500683_12519861_12520001_12520870_12521464_12562116
transcript_43208.known	chr12	-	3402	6	FSM	ENSG00000111266.9	ENST00000228862.3	3402	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	25.5076459125494	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCAAATGTGAATTTATT	-12562340	False	NA	-5	True	AATAAA	-16	NA	12562383	12475896	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_12478016_12480222_12480347_12487027_12487188_12519861_12520001_12520870_12521464_12562116
transcript_43211.known	chr12	+	3770	4	FSM	ENSG00000111269.3	ENST00000228865.3	3770	4	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_1	6.97614984548545	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGTGTTTGACTATTGT	12609362	True	NA	7	True	ATTAAA	-18	NA	12611875	12645108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_12612188_12635776_12635975_12637569_12637715_12641993
transcript_43217.known	chr12	-	553	4	FSM	ENSG00000183150.8	ENST00000540796.5	553	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	53.7649204097492	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACCCGGGGAAGTGGCC	-12695940	True	NA	NA	False	NA	NA	NA	12696207	12662270	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_12662471_12684350_12684508_12695458_12695512_12696064
transcript_43218.known	chr12	+	2411	3	FSM	ENSG00000111276.12	ENST00000228872.9	2411	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	7.5	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATTGAGTCAAATTGTAA	12715731	True	NA	13	True	AATAAA	-18	NA	12717367	12722369	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_12718315_12718824_12718955_12721035
transcript_43219.known	chr12	-	1751	2	FSM	ENSG00000183150.8	ENST00000540510.1	1751	2	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTTTGATTAATGATTCA	-12683390	True	NA	NA	False	CATAAA	-17	NA	12684521	12660890	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_12662471_12684350
transcript_43220.known	chr12	+	1698	11	FSM	ENSG00000213782.7	ENST00000352940.8	1698	11	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_7	205.716528261586	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCTAACTCCTTAAAGAC	NA	False	NA	15	True	AATAAA	-21	NA	12813315	12829979	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_12813455_12814130_12814225_12821207_12821397_12821654_12821727_12821964_12822084_12822660_12822733_12823202_12823320_12824539_12824678_12825999_12826071_12827245_12827376_12829422
transcript_43221.known	chr12	+	2357	11	FSM	ENSG00000213782.7	ENST00000545038.5	2357	11	0	0	0	0	multi-exon	FALSE	canonical	3	645	junction_6	42.1160302022876	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCTAACTCCTTAAAGAC	12809403	True	NA	15	True	AATAAA	-21	NA	12813353	12829979	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_12813455_12814130_12814225_12821207_12821397_12821654_12821727_12821964_12822084_12822660_12822733_12823202_12824017_12824539_12824678_12825999_12826071_12827245_12827376_12829422
transcript_43222.known	chr12	+	2689	9	FSM	ENSG00000213782.7	ENST00000542123.5	2689	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	240.877043322937	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAACTCCTTAAAGACCT	12809407	True	NA	17	True	AATAAA	-23	NA	12813357	12829981	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_12813455_12814130_12814225_12821654_12821727_12821964_12822084_12822660_12822733_12823202_12824678_12825999_12826071_12827245_12827376_12829422
transcript_43223.known	chr12	+	759	1	FSM	ENSG00000241352.3	ENST00000475592.2	759	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTCGTGAGACGTTATCA	NA	False	NA	NA	False	NA	NA	NA	12850981	12851740	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_12851000_12851700
transcript_43224.known	chr12	+	6582	4	FSM	ENSG00000013588.9	ENST00000014914.6	6582	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.942809041582063	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGAGTCAGGTGGTAAAA	12891526	True	NA	NA	False	AATAAA	-15	NA	12891561	12917937	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_12891665_12908242_12909172_12912083_12912143_12912446
transcript_43225.known	chr12	-	1159	4	FSM	ENSG00000013583.10	ENST00000014930.9	1159	4	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_2	2.35702260395516	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAAATCATAAGTGTAATT	-12995043	True	NA	-8	True	AATAAA	-23	NA	13000265	12974869	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_12975480_12987151_12987333_12989276_12989416_13000036
transcript_43226.known	chr12	-	2056	3	FSM	ENSG00000013583.10	ENST00000536942.1	2056	3	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCCCTTCTGTCTGTTCA	-12995043	True	NA	NA	False	NA	NA	NA	13000265	12985644	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_12987333_12989276_12989416_13000036
transcript_43229.known	chr12	+	4411	1	FSM	ENSG00000183935.5	ENST00000624664.1	4411	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTAACTTTCCCAGGCA	NA	False	NA	NA	False	AATAAA	-27	NA	13000419	13004830	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_13000400_13004800
transcript_43231.known	chr12	+	4711	13	FSM	ENSG00000084444.14	ENST00000197268.13	4711	13	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	8.15603048874471	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTGTGTGCCATTCTC	13043041	True	NA	NA	False	AATAAA	-18	NA	13044380	13083449	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_13044441_13055550_13055947_13058450_13058550_13061574_13061764_13062844_13062976_13066639_13066788_13067154_13067297_13068303_13068448_13068629_13068712_13071240_13071397_13076025_13076144_13079788_13080010_13080624
transcript_43238.known	chr12	+	8774	15	FSM	ENSG00000171681.13	ENST00000536444.5	8774	15	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	81.5636723858191	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGAGTACTCTGATTAA	14356397	True	NA	17	True	AATAAA	-18	NA	14365728	14502931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_14365828_14423908_14425474_14434339_14434424_14436105_14436252_14438129_14438268_14446987_14447054_14456560_14456635_14457206_14457296_14460494_14461134_14466525_14466591_14475889_14475969_14478316_14478473_14481002_14481186_14496230_14496344_14497653
transcript_43242.nnic	chr12	+	3720	14	NNC	ENSG00000171681.13	novel	8823	15	NA	NA	-49	-75	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_13	103.999658624838	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGCCTGCTTTGTATT	14356295	True	NA	16	True	ATTAAA	-25	NA	14365626	14482578	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_14365828_14423908_14425474_14434336_14434424_14436105_14436252_14438129_14438268_14446987_14447054_14456560_14456635_14457206_14457296_14460494_14461134_14466525_14466591_14475889_14475969_14478316_14478473_14481002_14481186_14482346
transcript_43245.known	chr12	+	4887	13	FSM	ENSG00000171681.13	ENST00000543189.5	4887	13	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	78.4457969272768	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCACTGACTCAAATGTT	14356361	True	NA	7	True	ATTAAA	-19	NA	14365692	14482653	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_14365828_14423908_14425474_14434339_14434424_14436105_14436252_14438129_14438268_14446987_14447054_14456560_14456635_14457206_14457296_14460494_14461134_14466525_14466591_14475889_14475969_14478316_14478473_14481002
transcript_43248.known	chr12	+	3563	11	FSM	ENSG00000171681.13	ENST00000537653.5	3563	11	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_2	37.5787173809858	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGATAGAATCAAATCTT	14356345	True	NA	NA	False	NA	NA	NA	14365676	14476432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_14365828_14423908_14425474_14434336_14434424_14436105_14436252_14438129_14438268_14446987_14447054_14456560_14456635_14457206_14457296_14460494_14461134_14466525_14466591_14475889
transcript_43250.nic	chr12	+	2999	9	ISM	ENSG00000171681.13	ENST00000537653.5	3563	11	-50	15305	-49	106	5prime_fragment	FALSE	canonical	3	278	junction_2	40.887039511317	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGGTAAGTCACCATGT	14356295	True	NA	NA	False	NA	NA	NA	14365626	14461127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_14365828_14423908_14425474_14434336_14434424_14436105_14436252_14438129_14438268_14446987_14447054_14456560_14456635_14457206_14457296_14460494
transcript_43252.nic	chr12	+	3199	8	ISM	ENSG00000171681.13	ENST00000537653.5	3563	11	-50	18304	-49	-2439	5prime_fragment	TRUE	canonical	3	278	junction_2	43.5229238213517	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGATAAAGTAATAGTAAAC	14356295	True	NA	NA	False	AATAAA	-16	NA	14365626	14458128	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_14365828_14423908_14425474_14434336_14434424_14436105_14436252_14438129_14438268_14446987_14447054_14456560_14456635_14457206
transcript_43256.nic	chr12	+	1390	2	ISM	ENSG00000171681.13	ENST00000545723.1	577	4	-61	13150	-49	-364	5prime_fragment	FALSE	canonical	3	396	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGTGAAAAGAATGAAGATGA	14356295	True	NA	NA	False	NA	NA	NA	14365626	14425097	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_14365828_14423908
transcript_43267.nnic	chr12	-	2830	11	NNC	ENSG00000121316.11	novel	1960	11	NA	NA	-703	0	intron_retention	FALSE	canonical	2	2	junction_6	134.449284118585	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCACTGACTTTGTTGT	NA	False	NA	-9	True	AATAAA	-23	NA	14568586	14503660	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_14503955_14506161_14506269_14506932_14507119_14511259_14511401_14511510_14511712_14535658_14535804_14536402_14536711_14540763_14540903_14542207_14542292_14553192_14553413_14567581
transcript_43268.known	chr12	-	1960	11	FSM	ENSG00000121316.11	ENST00000240617.10	1960	11	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_9	42.4807015007992	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCACTGACTTTGTTGT	-14567868	False	NA	-9	True	AATAAA	-23	NA	14567883	14503660	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_14503955_14506161_14506269_14506932_14507119_14511259_14511401_14511510_14511712_14535658_14535804_14536569_14536711_14540763_14540903_14542207_14542292_14553192_14553413_14567581
transcript_43271.nic	chr12	-	1770	10	NIC	ENSG00000121316.11	novel	1960	11	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_9	139.698882521578	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCACTGACTTTGTTGT	-14567898	False	NA	-9	True	AATAAA	-23	NA	14567913	14503660	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_14503955_14506161_14506269_14506932_14507119_14511259_14511401_14511510_14511712_14535658_14535804_14536569_14536711_14540763_14540903_14542207_14542292_14567581
transcript_43277.known	chr12	+	644	1	FSM	ENSG00000246705.5	ENST00000544848.3	620	1	-22	-2	-22	2	mono-exon	FALSE	NA	NA	NA	NA	NA	263	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCGAGAGAGCTGTGTAG	14757675	True	NA	27	True	AATAAA	-17	NA	14774382	14775026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_14774400_14775000
transcript_43283.known	chr12	-	4581	12	FSM	ENSG00000084463.8	ENST00000261167.7	4581	12	0	0	0	0	multi-exon	FALSE	canonical	3	1127	junction_1	64.8949564442479	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGGAAGGGTTATTTATA	-14789369	True	NA	-1	True	ATTAAA	-18	NA	14803478	14784581	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_14787499_14788950_14789134_14790455_14790750_14791168_14791271_14793730_14793923_14794536_14794737_14794970_14795105_14796806_14797004_14799634_14799729_14800751_14800784_14801319_14801429_14803351
transcript_43297.nic	chr12	-	1194	9	ISM	ENSG00000084463.8	ENST00000261167.7	4581	12	-74	6654	-66	-547	5prime_fragment	FALSE	canonical	3	1179	junction_1	49.6682745824737	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCAAGGAAGAAAAAGAAGAA	-14803522	True	NA	4	True	NA	NA	NA	14803552	14791235	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_14791271_14793730_14793923_14794536_14794737_14794970_14795105_14796806_14797004_14799634_14799729_14800751_14800784_14801319_14801429_14803351
transcript_43304.known	chr12	-	554	2	FSM	ENSG00000084463.8	ENST00000543316.1	554	2	0	0	0	0	multi-exon	FALSE	canonical	3	1274	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTATGAAACATTAAAC	-14789367	True	NA	NA	False	NA	NA	NA	14803476	14800999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_14801429_14803351
transcript_43305.known	chr12	+	1586	2	FSM	ENSG00000182993.5	ENST00000330828.3	1586	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATAAGTCTTTGGTTCTCA	14803335	True	NA	NA	False	AAGAAA	-26	NA	14803669	14824415	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_14803752_14822911
transcript_43308.known	chr12	-	2264	5	FSM	ENSG00000134533.6	ENST00000256953.6	2264	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.4790199457749	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGGGTAATCTTTCTTG	-15221334	True	NA	-1	True	AATAAA	-25	NA	15221417	15107782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_15109518_15111343_15111418_15121062_15121120_15217428_15217604_15221194
transcript_43309.known	chr12	-	1383	4	FSM	ENSG00000134533.6	ENST00000546331.5	1383	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.69967317119759	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTTTAAAATTTTATTT	-15221334	True	NA	NA	False	NA	NA	NA	15221417	15108606	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_15109518_15111343_15111418_15217428_15217604_15221194
transcript_43310.known	chr12	+	2095	9	FSM	ENSG00000151490.15	ENST00000543886.6	2095	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.61535599791501	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGTGTTAGTTCATTT	15322507	False	NA	NA	False	TATAAA	-22	NA	15322521	15517067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_15322802_15483973_15484248_15497244_15497404_15499441_15499595_15501619_15502064_15503907_15504070_15508570_15508768_15515497_15515619_15516762
transcript_43311.known	chr12	-	3904	22	FSM	ENSG00000151491.14	ENST00000645775.1	3904	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	10.7728557851996	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAATAAACAGTATTTGCT	-15788709	True	NA	-52	True	NA	NA	NA	15789388	15620190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_15621431_15623157_15623288_15624226_15624408_15631441_15631665_15640702_15640847_15641721_15641831_15647126_15647261_15650822_15651007_15654144_15654294_15658078_15658154_15658496_15658586_15660613_15660741_15662025_15662100_15665755_15665893_15666439_15666523_15669386_15669537_15669663_15669826_15670855_15670924_15681225_15681303_15682892_15682973_15713265_15713326_15789160
transcript_43312.known	chr12	-	3873	21	FSM	ENSG00000151491.14	ENST00000644374.1	3873	21	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_12	5.9268457040824	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGGTTTCTGTCTCATT	-15788709	True	NA	-23	True	AATAAA	-21	NA	15789388	15620161	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_15621431_15623157_15623288_15624226_15624408_15631441_15631665_15640702_15640847_15641721_15641831_15647126_15647261_15650822_15651007_15654144_15654294_15658078_15658154_15658496_15658586_15660613_15660741_15662025_15662100_15665755_15665893_15666439_15666523_15669386_15669537_15669663_15669826_15670855_15670924_15681225_15681303_15682892_15682973_15789160
transcript_43314.nic	chr12	-	1226	10	ISM	ENSG00000151491.14	ENST00000646123.1	3682	22	-62	40259	-50	-2560	5prime_fragment	FALSE	canonical	3	17	junction_1	7.24185366080014	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAAAAGGAAAGGACCAGG	-15788771	False	NA	22	True	AAGAAA	-10	NA	15789450	15660635	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_15660741_15662025_15662100_15665755_15665893_15666439_15666523_15669386_15669537_15669663_15669826_15670855_15670924_15681225_15681303_15682892_15682973_15789160
transcript_43318.known	chr12	+	1442	11	FSM	ENSG00000023734.11	ENST00000025399.10	1442	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	948.309759519536	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAGCAAGCAGAGAAA	15855065	True	NA	NA	False	NA	NA	NA	15882393	15903014	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_15882820_15883082_15883122_15883540_15883677_15889927_15890010_15890596_15890670_15894046_15894144_15895358_15895497_15897881_15898019_15899903_15900054_15900946_15901013_15902916
transcript_43319.known	chr12	+	1874	10	FSM	ENSG00000023734.11	ENST00000419869.7	1874	10	0	0	0	0	multi-exon	FALSE	canonical	3	2165	junction_5	124.763282031253	2675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGTTTGGTTTTTTTGGG	15855058	True	NA	88	True	AATAAA	-18	NA	15882386	15903478	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_15882820_15883540_15883677_15889927_15890010_15890596_15890670_15894046_15894144_15895358_15895497_15897881_15898019_15899903_15900054_15900946_15901013_15902916
transcript_43323.known	chr12	+	1698	9	FSM	ENSG00000023734.11	ENST00000541731.1	1698	9	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	774.393220124634	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAGTTGTCTAAATAAAA	15855062	True	NA	52	True	NA	NA	NA	15882390	15903442	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_15882820_15889927_15890010_15890596_15890670_15894046_15894144_15895358_15895497_15897881_15898019_15899903_15900054_15900946_15901013_15902916
transcript_43335.known	chr12	+	1644	9	FSM	ENSG00000023697.13	ENST00000428559.7	1644	9	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_4	17.9230124421092	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGAATCTCTCTAGTT	15908597	True	NA	NA	False	ATTAAA	-25	NA	15911331	16037381	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_15911415_15956935_15957034_15958187_15958336_15959828_15959925_15962812_15962948_15982307_15982437_16032541_16032655_16036231_16036382_16036689
transcript_43339.known	chr12	+	854	8	FSM	ENSG00000023697.13	ENST00000532964.5	854	8	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_5	95.1415701328654	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCAGTTCCAGAAAAGTT	15908628	True	NA	NA	False	NA	NA	NA	15911362	16036751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_15911415_15956935_15957034_15958187_15958336_15959828_15959925_15962812_15962948_16032541_16032655_16036231_16036382_16036689
transcript_43340.nic	chr12	+	1442	8	NIC	ENSG00000023697.13	novel	1644	9	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	91.1840480141395	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAGTTCCTATAGTTTA	15908550	True	NA	NA	False	ATTAAA	-12	NA	15911284	16037280	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_15911415_15956935_15957034_15959828_15959925_15962812_15962948_15982307_15982437_16032541_16032655_16036231_16036382_16036689
transcript_43349.known	chr12	+	406	4	FSM	ENSG00000008394.13	ENST00000543076.5	406	4	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_2	1578.61929827583	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGGCTTACAGGTTGCT	16277342	True	NA	NA	False	AATAGA	-37	NA	16347644	16363999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_16347711_16354230_16354271_16357604_16357700_16363794
transcript_43350.known	chr12	+	925	4	FSM	ENSG00000008394.13	ENST00000396210.8	925	4	0	0	0	0	multi-exon	FALSE	canonical	3	3342	junction_1	189.536862436367	1531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTGGTTTTATTTTT	16277342	True	NA	21	True	AATAAA	-16	NA	16347644	16364410	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_16347711_16354230_16354379_16357604_16357700_16363794
transcript_43351.known	chr12	+	933	4	FSM	ENSG00000008394.13	ENST00000542256.5	933	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	29.3295452099452	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGTTTCTGATTATTCA	16277351	True	NA	NA	False	NA	NA	NA	16347653	16370408	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_16347711_16357604_16357700_16367324_16367466_16369768
transcript_43353.known	chr12	+	365	4	FSM	ENSG00000008394.13	ENST00000540126.5	365	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	1688.77891454809	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATTATTCCATTTCTT	16347760	False	NA	1	True	NA	NA	NA	16347796	16363814	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_16347899_16354230_16354379_16357604_16357700_16363794
transcript_43355.nic	chr12	+	848	3	NIC	ENSG00000008394.13	novel	925	4	NA	NA	-72	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	1853.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTTTGGTTTTATTTT	NA	False	NA	20	True	AATAAA	-15	NA	16347572	16364409	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_16347711_16357604_16357700_16363794
transcript_43356.known	chr12	+	551	2	FSM	ENSG00000008394.13	ENST00000537878.5	551	2	0	0	0	0	multi-exon	FALSE	canonical	3	3342	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGTATTTTCAGCTCTA	16277351	True	NA	NA	False	AAAACA	-19	NA	16347653	16354724	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_16347711_16354230
transcript_43362.known	chr12	-	587	5	FSM	ENSG00000048540.16	ENST00000536172.5	587	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	60.4498759303938	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCTGATCTATCAACATCAC	-16606689	True	NA	NA	False	AATGAA	-23	NA	16607185	16551227	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_16551328_16560412_16560539_16600713_16600869_16606065_16606133_16607046
transcript_43363.known	chr12	-	2403	5	FSM	ENSG00000048540.16	ENST00000453727.6	2403	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	51.3243363327769	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCTTCATGGTTAGGAG	-16606381	False	NA	67	True	AAGAAA	-37	NA	16606440	16549374	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_16551328_16560412_16560539_16600713_16600869_16606065_16606133_16606338
transcript_43368.known	chr12	-	3393	4	FSM	ENSG00000048540.16	ENST00000537304.6	3393	4	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	33.5062183283442	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATTGCACTTAATTGGC	-16606103	False	NA	-4	True	AATAAA	-16	NA	16606162	16548371	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_16551328_16560412_16560539_16600654_16600869_16606065
transcript_43376.known	chr12	+	4238	26	FSM	ENSG00000052126.15	ENST00000299275.10	4238	26	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_5	35.5696499842211	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTTAGAATTTTTGTT	19129646	False	NA	12	True	AATAAA	-17	NA	19129793	19376400	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_19129889_19130050_19130131_19132392_19132451_19253939_19254024_19255044_19255166_19257432_19257538_19260948_19261022_19265749_19265851_19269769_19269886_19274515_19274984_19283279_19283746_19287472_19287557_19320561_19320625_19322309_19322391_19322517_19322668_19336514_19336617_19343322_19343435_19345841_19345889_19348398_19348520_19353883_19354003_19358227_19358438_19359411_19359547_19361581_19361707_19365963_19366110_19369692_19369799_19375530
transcript_43386.nic	chr12	+	1141	10	ISM	ENSG00000052126.15	ENST00000538714.5	6487	28	-208	99051	-145	8800	5prime_fragment	FALSE	canonical	3	250	junction_5	24.6891789161883	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGGAAATGAGCAAAATTG	19129422	False	NA	-9	True	ATTAAA	-27	NA	19129587	19274617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_19129889_19130050_19130131_19132392_19132451_19253939_19254024_19255044_19255166_19257432_19257538_19260948_19261022_19265749_19265851_19269769_19269886_19274515
transcript_43387.known	chr12	+	1954	4	FSM	ENSG00000052126.15	ENST00000540972.5	1954	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	149.217961385351	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGGTTCATTACT	19124398	True	NA	NA	False	AATAAA	-27	NA	19129751	19202003	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_19129889_19130050_19130131_19132392_19132451_19200324
transcript_43389.nic	chr12	+	909	4	NIC	ENSG00000052126.15	novel	1954	4	NA	NA	-64	83	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	144.058630039609	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCAGTTTGCTTTTTATC	19129330	True	NA	NA	False	ATTAAA	-25	NA	19129668	19207816	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_19129889_19130050_19130131_19132392_19132451_19207265
transcript_43391.known	chr12	+	5099	9	FSM	ENSG00000139154.16	ENST00000398864.7	5099	9	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_8	28.2353391160793	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTTGTAACACTGCAGT	19439083	False	NA	NA	False	ATTAAA	-29	NA	19439673	19522239	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_19440371_19462509_19462718_19473247_19473356_19493799_19493987_19500096_19500222_19512397_19512466_19514670_19514785_19518086_19518114_19518674
transcript_43393.known	chr12	+	5830	8	FSM	ENSG00000139154.16	ENST00000266508.14	5830	8	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	15.9808558939138	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGGACATTTTGCATTTG	19431121	True	NA	NA	False	ATTAAA	-17	NA	19439491	19522227	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_19440371_19462509_19462718_19473247_19473356_19493799_19493987_19500096_19500222_19512397_19512466_19514670_19514785_19518086
transcript_43398.nic	chr12	+	1374	4	ISM	ENSG00000139154.16	ENST00000673644.1	774	7	-860	24167	-28	121	5prime_fragment	FALSE	canonical	3	122	junction_1	11.115554667022	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAGGAAATTAAAGAACAAA	19431093	True	NA	NA	False	AATGAA	-6	NA	19439463	19493950	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_19440371_19462509_19462718_19473247_19473356_19493799
transcript_43410.known	chr12	-	2572	16	FSM	ENSG00000004700.16	ENST00000421138.6	2572	16	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_15	58.3092902832244	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCAAGGATGTCCAATCT	-21496066	True	NA	NA	False	NA	NA	NA	21501551	21469801	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477970_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501169_21501216_21501412
transcript_43424.known	chr12	-	3745	15	FSM	ENSG00000004700.16	ENST00000444129.7	3745	15	0	0	0	0	multi-exon	TRUE	canonical	3	233	junction_14	33.0316020606612	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTATGTTTTTATATTT	-21496150	True	NA	-1	True	AATAAA	-23	NA	21501635	21468909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477970_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501169
transcript_43428.nic	chr12	-	3022	15	NIC	ENSG00000004700.16	novel	2572	16	NA	NA	15	427	combination_of_known_junctions	FALSE	canonical	3	32	junction_14	76.9029337833726	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCAAGAAAAATCTCATGT	-21496135	True	NA	NA	False	NA	NA	NA	21501620	21469374	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477970_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501412
transcript_43436.known	chr12	+	4075	12	FSM	ENSG00000121350.16	ENST00000240651.14	4075	12	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_4	3.82466981235684	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTCGTTACTTTTTTTT	21437183	True	NA	NA	False	AATAAA	-36	NA	21437654	21471250	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_21437815_21440367_21440449_21445346_21445467_21449562_21449692_21452080_21452155_21455131_21455293_21455994_21456096_21461024_21461155_21462007_21462121_21462739_21462863_21467480_21467619_21468505
transcript_43442.known	chr12	-	932	7	FSM	ENSG00000004700.16	ENST00000396093.7	932	7	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_6	94.9853789918334	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTACTCGAATTGCTGTG	-21501645	False	NA	NA	False	AAAAAG	-45	NA	21501669	21483441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501169_21501216_21501462
transcript_43444.known	chr12	+	562	6	FSM	ENSG00000111711.10	ENST00000542194.1	562	6	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	227.415918528145	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTATAAAGTCATTTGAAG	21499105	True	NA	NA	False	TTTAAA	-11	NA	21501852	21515746	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_21501949_21506884_21506977_21507116_21507152_21508382_21508562_21512294_21512377_21515668
transcript_43445.known	chr12	+	1210	6	FSM	ENSG00000111711.10	ENST00000539025.5	1210	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	221.069581806272	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATAAAACTTTTGTGG	21499081	True	NA	-6	True	NA	NA	NA	21501828	21516239	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_21501949_21506884_21506977_21507943_21508110_21508382_21508562_21512294_21512377_21515668
transcript_43447.known	chr12	+	3253	5	FSM	ENSG00000111711.10	ENST00000229314.10	3253	5	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_2	69.3289261419792	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTCCCAGTTTGTATA	21499041	True	NA	23	True	AATAAA	-37	NA	21501788	21518408	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_21501949_21506884_21506977_21508382_21508562_21512294_21512377_21515668
transcript_43452.known	chr12	+	700	4	FSM	ENSG00000111711.10	ENST00000545093.5	700	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	225.531963736111	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCATCCATAGGCATTTG	21499069	True	NA	37	True	NA	NA	NA	21501816	21516062	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_21501949_21506884_21506977_21512294_21512377_21515668
transcript_43454.known	chr12	+	813	3	FSM	ENSG00000111711.10	ENST00000535593.5	813	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	224	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATGGTTAAAATAAAAC	21499033	True	NA	-14	True	ATTAAA	-45	NA	21501780	21516231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_21501949_21512294_21512377_21515668
transcript_43460.known	chr12	-	1538	8	FSM	ENSG00000111716.14	ENST00000396076.5	1538	8	0	0	0	0	multi-exon	TRUE	canonical	3	202	junction_7	3998.15496223456	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTTCTGGGATTCCT	-21507589	True	NA	-25	True	AATAAA	-19	NA	21657794	21635341	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_21635710_21637070_21637195_21638352_21638471_21641951_21642126_21643934_21644109_21646898_21647017_21654542_21654678_21657467
transcript_43466.nic	chr12	-	802	6	ISM	ENSG00000111716.14	ENST00000350669.5	1303	8	-6	3026	-6	0	5prime_fragment	FALSE	canonical	3	10600	junction_2	838.67786426017	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGTGGTTGAAAGGTAAG	-21507643	True	NA	22	True	NA	NA	NA	21657848	21638367	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_21638471_21641951_21642126_21643934_21644109_21646898_21647017_21654542_21654678_21657750
transcript_43471.known	chr12	-	2274	3	FSM	ENSG00000121361.5	ENST00000240662.3	2274	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTGTAGTTTTGTGATT	-21774657	False	NA	NA	False	ATTAAA	-15	NA	21774706	21764954	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_21766624_21773242_21773687_21774545
transcript_43473.known	chr12	-	9707	5	FSM	ENSG00000111728.11	ENST00000396037.9	9707	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	2.1650635094611	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTGAAGTCTTTTCATT	-22334689	True	NA	-3	True	AATAAA	-14	NA	22334707	22193390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_22202039_22249005_22249099_22255279_22255390_22287148_22287294_22333996
transcript_43474.known	chr12	-	1996	4	FSM	ENSG00000111728.11	ENST00000261197.7	1996	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.44948974278318	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGATTTGTTGAGCCACG	-22334703	False	NA	NA	False	AATAAA	-25	NA	22334714	22200998	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_22202039_22249005_22249099_22287148_22287294_22333996
transcript_43475.known	chr12	+	1748	8	FSM	ENSG00000111726.13	ENST00000229329.7	1748	8	0	0	0	0	multi-exon	FALSE	canonical	3	1273	junction_3	116.186865673802	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAACTGCCTTGTTGCTC	22032953	True	NA	20	True	AATAAA	-21	NA	22046217	22065668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_22046564_22055148_22055292_22055454_22055611_22058566_22058701_22060831_22060927_22061280_22061453_22062280_22062435_22065120
transcript_43476.nic	chr12	+	1028	6	ISM	ENSG00000111726.13	ENST00000229329.7	1748	8	-44	4278	-44	484	5prime_fragment	FALSE	canonical	3	1273	junction_3	133.687695768908	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATATCTTATGATGTAAAA	22032909	True	NA	NA	False	AAAAAG	-4	NA	22046173	22061390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_22046564_22055148_22055292_22055454_22055611_22058566_22058701_22060831_22060927_22061280
transcript_43479.nic	chr12	-	4571	27	NIC	ENSG00000111731.13	novel	4585	27	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_4	57.6396297964944	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAATATTCCTAAATCTC	-22544530	False	NA	-13	True	AATAAA	-18	NA	22544558	22448582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_22449892_22453895_22454043_22456970_22457162_22458483_22458556_22459491_22459543_22469708_22469796_22470823_22470912_22471398_22471489_22471966_22472066_22472285_22472348_22472743_22472808_22474750_22474892_22478312_22478478_22482556_22482744_22484696_22484889_22490122_22490219_22493222_22493338_22506710_22506820_22513293_22513380_22517985_22518138_22523425_22523625_22524471_22524628_22525609_22525706_22527720_22527893_22535257_22535345_22544060_22544180_22544319
transcript_43480.known	chr12	-	4585	27	FSM	ENSG00000111731.13	ENST00000446597.6	4585	27	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	52.0481826158173	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAATATTCCTAAATCTC	-22542435	True	NA	-13	True	AATAAA	-18	NA	22544542	22448582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_22449892_22453895_22454043_22456970_22457162_22458483_22458586_22459491_22459543_22469708_22469796_22470823_22470912_22471398_22471489_22471966_22472066_22472285_22472348_22472743_22472808_22474750_22474892_22478312_22478478_22482556_22482744_22484696_22484889_22490122_22490219_22493222_22493338_22506710_22506820_22513293_22513380_22517985_22518138_22523425_22523625_22524471_22524628_22525609_22525706_22527720_22527893_22535257_22535345_22544060_22544180_22544319
transcript_43484.known	chr12	-	4436	25	FSM	ENSG00000111731.13	ENST00000333957.8	4436	25	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_24	28.3592712157574	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAATATTCCTAAATCTC	-22542439	True	NA	-13	True	AATAAA	-18	NA	22544546	22448582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_22449892_22453895_22454043_22456970_22457162_22469708_22469796_22470823_22470912_22471398_22471489_22471966_22472066_22472285_22472348_22472743_22472808_22474750_22474892_22478312_22478478_22482556_22482744_22484696_22484889_22490122_22490219_22493222_22493338_22506710_22506820_22513293_22513380_22517985_22518138_22523425_22523625_22524471_22524628_22525609_22525706_22527720_22527893_22535257_22535345_22544060_22544180_22544319
transcript_43502.known	chr12	-	4694	11	FSM	ENSG00000060982.15	ENST00000538118.5	4694	11	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_10	245.094287979137	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACAGAGGCAGAGGCAGG	-24902260	False	NA	25	True	AAGAAA	-30	NA	24902296	24814802	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_24818050_24829822_24829898_24832722_24832864_24836510_24836597_24842081_24842225_24849785_24849950_24878529_24878650_24881300_24881412_24894274_24894476_24901813_24901886_24901962
transcript_43504.known	chr12	-	1811	11	FSM	ENSG00000060982.15	ENST00000539282.5	1811	11	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_10	219.4749188404	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAATATCTGTTTTCTTC	-24901883	True	NA	NA	False	NA	NA	NA	24903075	24817480	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_24818050_24829822_24829898_24832722_24832864_24836510_24836597_24842081_24842225_24849785_24849950_24878529_24878650_24881300_24881412_24894274_24894476_24901813_24901886_24902946
transcript_43505.known	chr12	-	9314	11	FSM	ENSG00000060982.15	ENST00000261192.12	9314	11	0	0	0	0	multi-exon	FALSE	canonical	3	720	junction_7	66.7769421282526	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGACTGTTTGTATCC	-24933113	True	NA	-7	True	AATAAA	-16	NA	24949101	24810023	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_24818050_24829822_24829898_24832722_24832864_24836510_24836597_24842081_24842225_24849785_24849950_24878529_24878650_24881300_24881412_24894274_24894476_24901813_24901886_24948926
transcript_43514.known	chr12	-	1360	10	FSM	ENSG00000060982.15	ENST00000539780.5	1360	10	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_7	250.785777453267	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTAGTAACTTACCTTAC	-24933055	True	NA	5	True	AATGAA	-32	NA	24949043	24817808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_24818050_24829822_24829898_24832722_24832864_24836510_24836597_24842081_24842225_24849785_24849950_24878529_24878650_24894274_24894476_24901813_24901886_24948926
transcript_43520.known	chr12	-	4319	9	FSM	ENSG00000060982.15	ENST00000342945.9	4319	9	0	0	0	0	multi-exon	FALSE	canonical	2	33	junction_8	355.767743759886	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	-24933098	True	NA	7	True	AAGAAA	-12	NA	24949086	24814820	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_24818050_24829822_24829898_24832722_24832864_24836510_24836597_24842081_24842225_24849785_24849950_24878529_24878650_24894274_24894476_24948926
transcript_43539.known	chr12	-	521	2	FSM	ENSG00000060982.15	ENST00000355164.3	521	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTAAATGTTCCTACTGT	-24933073	True	NA	NA	False	NA	NA	NA	24949061	24945430	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_24945817_24948926
transcript_43540.known	chr12	-	5430	6	FSM	ENSG00000133703.14	ENST00000256078.10	5430	6	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_2	249.625799948643	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGTGTGTATTTATTCA	-25239383	True	NA	-5	True	AATAAA	-16	NA	25250929	25205245	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_25209912_25215436_25215561_25225613_25225774_25227233_25227413_25245273_25245396_25250750
transcript_43544.known	chr12	-	5306	5	FSM	ENSG00000133703.14	ENST00000311936.8	5306	5	0	0	0	0	multi-exon	FALSE	canonical	3	509	junction_1	61.8885086264001	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGTGTGTATTTATTCA	-25239383	True	NA	-5	True	AATAAA	-16	NA	25250929	25205245	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_25209912_25225613_25225774_25227233_25227413_25245273_25245396_25250750
transcript_43548.nic	chr12	-	701	5	ISM	ENSG00000133703.14	ENST00000256078.10	5430	6	0	10254	0	-5827	5prime_fragment	FALSE	canonical	3	120	junction_1	224.582390226839	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAGCAAAGAAGAAAAGACT	-25239383	True	NA	NA	False	AATACA	-13	NA	25250929	25215499	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_25215561_25225613_25225774_25227233_25227413_25245273_25245396_25250750
transcript_4355.known	chr1	-	3788	3	FSM	ENSG00000125945.15	ENST00000374608.3	3788	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	3	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTGTGAGCCACTATGG	NA	False	NA	-3	True	AATAAA	-19	NA	23368386	23359974	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23363222_23367041_23367169_23367972
transcript_43552.known	chr12	+	1242	3	FSM	ENSG00000205707.11	ENST00000381356.9	1242	3	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_2	6.5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGATTCACTGGTATAC	25194076	True	NA	NA	False	AATAAA	-22	NA	25195236	25205143	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_25195338_25203919_25204008_25204090
transcript_43554.known	chr12	-	1696	3	FSM	ENSG00000133703.14	ENST00000686969.1	2957	3	0	1261	0	-1228	multi-exon	FALSE	canonical	1	12	junction_1	37.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATTCATTCACTTATTTA	-25239383	True	NA	NA	False	AATAAA	-43	NA	25250929	25233818	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_25235227_25245273_25245396_25250763
transcript_43558.known	chr12	-	698	4	FSM	ENSG00000246695.9	ENST00000500102.6	698	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	23.0988215187606	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGATTGTCAATGAATCAGA	-25957549	False	NA	NA	False	AATAAA	-18	NA	25957585	25954920	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_25955242_25956226_25956348_25956638_25956762_25957452
transcript_43559.known	chr12	-	3560	4	FSM	ENSG00000246695.9	ENST00000670839.1	3560	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	13.2748718344933	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGCACCTTTGCACTCT	-25958097	True	NA	NA	False	NA	NA	NA	25958541	25952448	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_25955242_25956226_25956348_25956638_25956762_25958018
transcript_4356.known	chr1	+	997	2	FSM	ENSG00000249087.8	ENST00000454117.2	1266	2	269	0	-5	0	multi-exon	FALSE	canonical	2	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCCTTGATGTGTGTAAT	23369112	False	NA	63	True	TTTAAA	-2	NA	23369217	23371839	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_23369514_23371138
transcript_43563.known	chr12	+	4348	3	FSM	ENSG00000123096.12	ENST00000422622.3	4348	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTGGACGTGCTTTAAA	26195281	True	NA	11	True	AATAAA	-23	NA	26195339	26234779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_26195532_26224292_26224380_26230710
transcript_43565.known	chr12	+	4533	3	FSM	ENSG00000123096.12	ENST00000242729.7	4533	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTGGACGTGCTTTA	26195514	False	NA	9	True	AATAAA	-21	NA	26195572	26234777	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_26195952_26224292_26224380_26230710
transcript_43569.nic	chr12	-	738	4	ISM	ENSG00000123104.12	ENST00000242737.5	581	6	-430	3427	-17	-2276	5prime_fragment	FALSE	canonical	3	27	junction_2	1.69967317119759	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATCGGAGAATAAGAAAC	-26830465	True	NA	NA	False	AAAACA	-4	NA	26833211	26724713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_26724743_26725649_26725766_26790156_26790228_26832689
transcript_43570.nic	chr12	-	2826	2	ISM	ENSG00000123104.12	ENST00000242737.5	581	6	-429	66636	-16	-65485	5prime_fragment	FALSE	canonical	3	31	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATAGTCACCTTATGATAG	-26830464	True	NA	NA	False	NA	NA	NA	26833210	26787922	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_26790228_26832689
transcript_43571.known	chr12	-	12564	57	FSM	ENSG00000123104.12	ENST00000381340.8	12564	57	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_49	17.9305277817083	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTGTTTGCAATACTT	-26830448	True	NA	-21	True	AATAAA	-16	NA	26833194	26335351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_26339484_26340166_26340329_26387433_26387595_26398875_26399042_26400127_26400259_26411319_26411413_26415302_26415499_26419048_26419214_26427912_26428089_26436220_26436347_26439126_26439320_26443542_26443651_26475295_26475419_26476911_26477008_26481130_26481242_26483697_26483899_26486103_26486361_26487067_26487252_26494152_26494341_26495151_26495261_26550246_26550356_26556232_26556376_26561761_26561953_26578712_26578834_26580026_26580156_26595464_26595591_26596882_26597135_26599144_26599346_26599986_26600110_26602369_26602496_26602616_26602707_26621122_26621297_26622239_26622406_26624298_26624357_26628032_26628163_26631865_26632060_26653975_26654127_26655707_26655853_26656296_26656549_26657706_26657893_26658010_26658131_26659112_26659286_26663684_26663847_26665909_26666052_26681873_26682035_26682573_26682674_26686480_26686633_26695605_26695651_26711172_26711269_26715298_26715446_26715751_26715836_26716143_26716243_26722396_26722556_26724655_26724743_26725649_26725766_26790156_26790228_26832689
transcript_43574.known	chr12	-	2634	17	FSM	ENSG00000064102.15	ENST00000261191.12	2634	17	0	0	0	0	multi-exon	FALSE	canonical	3	381	junction_6	39.9483553322286	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGGAGAATTACTTTAGA	-26933633	True	NA	-17	True	AATAAA	-27	NA	26937981	26905180	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_26905537_26906301_26906438_26911177_26911318_26913456_26913688_26913973_26914129_26914407_26914579_26916001_26916181_26917351_26917442_26917643_26917734_26922615_26922701_26924354_26924484_26925760_26925852_26928204_26928286_26928702_26928906_26934555_26934631_26936578_26936815_26937795
transcript_43581.nic	chr12	-	2815	16	NIC	ENSG00000064102.15	novel	2634	17	NA	NA	-7	0	intron_retention	FALSE	canonical	3	46	junction_5	108.047397007054	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGGAGAATTACTTTAGA	NA	False	NA	-17	True	AATAAA	-27	NA	26938333	26905180	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_26905537_26906301_26906438_26911177_26911318_26913456_26913688_26913973_26914129_26916001_26916181_26917351_26917442_26917643_26917734_26922615_26922701_26924354_26924484_26925760_26925852_26928204_26928286_26928702_26928906_26934555_26934631_26936578_26936815_26937795
transcript_43584.nic	chr12	-	2265	14	ISM	ENSG00000064102.15	ENST00000261191.12	2634	17	-352	8365	-7	474	5prime_fragment	FALSE	canonical	3	381	junction_3	35.4968120912154	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGAGGAAGAAAGAGGGAAGA	NA	False	NA	-64	True	AAGAAA	-1	NA	26938333	26913545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_26913688_26913973_26914129_26914407_26914579_26916001_26916181_26917351_26917442_26917643_26917734_26922615_26922701_26924354_26924484_26925760_26925852_26928204_26928286_26928702_26928906_26934555_26934631_26936578_26936815_26937795
transcript_43586.nic	chr12	-	2077	13	ISM	ENSG00000064102.15	ENST00000261191.12	2634	17	-352	8839	-7	0	5prime_fragment	FALSE	canonical	3	381	junction_2	33.9855974396999	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTACCTATTTCCACAGTT	NA	False	NA	NA	False	AATATA	-33	NA	26938333	26914019	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_26914129_26914407_26914579_26916001_26916181_26917351_26917442_26917643_26917734_26922615_26922701_26924354_26924484_26925760_26925852_26928204_26928286_26928702_26928906_26934555_26934631_26936578_26936815_26937795
transcript_43590.known	chr12	+	2932	7	FSM	ENSG00000111790.14	ENST00000229395.8	2932	7	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_5	56.2240063397201	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTCTCCAATTTAATTT	26933186	True	NA	13	True	ATTAAA	-20	NA	26938469	26966648	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_26938711_26954144_26954294_26956542_26956661_26957600_26957744_26960514_26960629_26963341_26963456_26964595
transcript_43593.known	chr12	+	2790	6	FSM	ENSG00000111790.14	ENST00000327214.5	2790	6	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_4	50.6620173305406	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCTCCAATTTAATTTGA	26933216	True	NA	15	True	ATTAAA	-22	NA	26938499	26966650	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_26938711_26954144_26954294_26956542_26956661_26957600_26957744_26963341_26963456_26964595
transcript_43596.known	chr12	+	956	5	FSM	ENSG00000111790.14	ENST00000546072.5	956	5	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_4	45.8659732263472	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGGTTTTATAGGTTATT	26933213	True	NA	109	True	NA	NA	NA	26938496	26960846	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_26938711_26954144_26954294_26956542_26956661_26957600_26957744_26960514
transcript_43599.known	chr12	+	865	4	FSM	ENSG00000111790.14	ENST00000395941.4	865	4	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_1	12.3558353285671	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTTGTACGTTGAAAAAT	26933200	True	NA	NA	False	TATAAA	-24	NA	26938483	26957971	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_26938711_26954144_26954294_26956542_26956661_26957600
transcript_43603.known	chr12	-	4315	12	FSM	ENSG00000064115.11	ENST00000343028.9	4315	12	0	0	0	0	multi-exon	FALSE	canonical	3	480	junction_4	73.7395461143953	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCTAAAAAGCCTCATTAAA	-27008338	True	NA	-9	True	AATAAA	-19	NA	27014384	26971578	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_26974228_26975495_26975659_26976259_26976358_26979783_26979937_26980565_26980647_26982772_26982860_26990449_26990628_26995236_26995409_26996741_26996863_26999525_26999677_27003235_27003391_27014077
transcript_4361.nic	chr1	-	4184	25	NIC	ENSG00000088280.20	novel	4051	25	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_4	54.7768199149969	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGGTTTCATTTATGT	-23481846	True	NA	-3	True	AATAAA	-18	NA	23484249	23428562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_23429931_23431034_23431126_23431695_23431919_23433076_23433273_23433361_23433533_23433625_23433694_23434253_23434370_23434532_23434619_23435850_23436029_23436559_23436655_23436910_23437045_23437129_23437321_23437423_23437473_23438746_23438835_23439160_23439231_23441101_23441212_23441386_23441474_23441654_23441731_23442185_23442272_23442500_23442613_23451478_23451529_23452696_23452772_23455880_23456027_23456121_23456195_23484004
transcript_43611.nic	chr12	-	2375	12	NIC	ENSG00000064115.11	novel	4315	12	NA	NA	7	444	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	181.408857429066	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATTCTTCTGCAGAGCAC	-27008381	True	NA	-18	True	ATTAAA	-25	NA	27014427	26973651	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_26974228_26975495_26975659_26976259_26976358_26979783_26979937_26980565_26980647_26982772_26982860_26990449_26990628_26995236_26995409_26996741_26996863_26999525_26999767_27003235_27003391_27014077
transcript_43620.nic	chr12	-	2094	11	NIC	ENSG00000064115.11	novel	4315	12	NA	NA	-7	444	combination_of_known_junctions	FALSE	canonical	3	66	junction_10	174.922297034998	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATTCTTCTGCAGAGCAC	-27008345	True	NA	-18	True	ATTAAA	-25	NA	27014391	26973651	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_26974228_26975495_26975659_26976259_26976358_26979783_26979937_26980565_26980647_26982772_26982860_26990449_26990628_26995236_26995409_26996741_26996863_26999525_26999677_27014077
transcript_43623.nic	chr12	-	2132	11	NIC	ENSG00000064115.11	novel	4315	12	NA	NA	7	444	combination_of_known_junctions	FALSE	canonical	3	111	junction_3	161.284872198232	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATTCTTCTGCAGAGCAC	-27008381	True	NA	-18	True	ATTAAA	-25	NA	27014427	26973651	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_26974228_26975495_26975659_26976259_26976358_26980565_26980647_26982772_26982860_26990449_26990628_26995236_26995409_26996741_26996863_26999525_26999677_27003235_27003391_27014077
transcript_43631.nic	chr12	-	1976	10	NIC	ENSG00000064115.11	novel	4315	12	NA	NA	10	444	combination_of_known_junctions	FALSE	canonical	3	43	junction_9	187.834311016549	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATTCTTCTGCAGAGCAC	-27008378	True	NA	-18	True	ATTAAA	-25	NA	27014424	26973651	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_26974228_26975495_26975659_26976259_26976358_26979783_26979937_26980565_26980647_26982772_26982860_26990449_26990628_26995236_26995409_26996741_26996863_27014077
transcript_43656.known	chr12	-	737	4	FSM	ENSG00000064115.11	ENST00000542019.1	737	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_3	260.186258070808	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTAAATCTGAGTCCCAT	-27008327	True	NA	NA	False	NA	NA	NA	27014373	26995239	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_26995409_26996741_26996863_26999525_26999677_27014077
transcript_43657.known	chr12	-	577	3	FSM	ENSG00000064115.11	ENST00000543803.5	577	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	266.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTGAGTCCCATGATTT	-27008313	True	NA	NA	False	NA	NA	NA	27014359	26995234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_26995409_26996741_26996863_27014077
transcript_43658.known	chr12	+	2669	4	FSM	ENSG00000152944.9	ENST00000282892.4	2669	4	0	0	0	0	multi-exon	FALSE	canonical	3	548	junction_3	31.8573208052543	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACAGTTTGCTTTTTTCA	27017999	True	NA	20	True	ATTAAA	-22	NA	27022557	27030673	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_27022622_27026419_27026535_27027346_27027448_27028284
transcript_43663.known	chr12	+	578	4	FSM	ENSG00000152944.9	ENST00000536711.5	578	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	278.540641359369	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGGATGTTGTTTATCGA	27018003	True	NA	NA	False	AAGAAA	-22	NA	27022561	27028336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_27022872_27026419_27026535_27027346_27027448_27028284
transcript_43664.known	chr12	+	1374	3	FSM	ENSG00000152944.9	ENST00000536503.5	1374	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	254	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAATATGCTGAGCTACAT	27017991	True	NA	NA	False	GGGGCT	-9	NA	27022549	27029485	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_27022622_27027346_27027448_27028284
transcript_43666.known	chr12	+	1861	1	FSM	ENSG00000275764.1	ENST00000620519.1	1861	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGCACTTTGGGAGGCT	27037081	False	NA	23	True	AATAAA	-26	NA	27037099	27038960	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_27037100_27039000
transcript_43671.known	chr12	+	4957	14	FSM	ENSG00000211455.8	ENST00000389032.8	4957	14	0	0	0	0	multi-exon	FALSE	canonical	1	124	junction_7	88.1182637276	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTTGATGAAGTTTTT	27237937	True	NA	15	True	AATAAA	-17	NA	27244285	27325959	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_27244333_27297709_27297855_27302136_27302189_27308338_27308462_27309113_27309198_27312548_27312673_27314503_27314659_27315014_27315118_27315288_27315351_27317335_27317454_27317895_27318020_27319327_27319424_27322142_27322235_27322327
transcript_4368.known	chr1	-	4051	25	FSM	ENSG00000088280.20	ENST00000336689.8	4051	25	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_8	17.4852616508876	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGGTTTCATTTATGT	-23481776	True	NA	-3	True	AATAAA	-18	NA	23484179	23428562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23429931_23431034_23431126_23431695_23431919_23433076_23433273_23433424_23433533_23433625_23433694_23434253_23434370_23434532_23434619_23435850_23436029_23436559_23436655_23436910_23437045_23437129_23437321_23437423_23437473_23438746_23438835_23439160_23439231_23441101_23441212_23441386_23441474_23441654_23441731_23442185_23442272_23442500_23442613_23451478_23451529_23452696_23452772_23455880_23456027_23456121_23456195_23484004
transcript_43684.known	chr12	+	581	3	FSM	ENSG00000211455.8	ENST00000539863.1	581	3	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_1	24	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTCTCTAGTTCAGTGC	27237918	True	NA	NA	False	TTTAAA	-6	NA	27244266	27302506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_27244333_27297709_27297855_27302136
transcript_43688.known	chr12	+	1888	16	FSM	ENSG00000029153.15	ENST00000311001.9	1888	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	15.4367526809667	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGATTTTTAACTCCAAA	27333042	False	NA	-39	True	NA	NA	NA	27333054	27420533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_27333104_27368261_27368413_27370128_27370231_27380246_27380405_27385480_27385561_27387227_27387321_27389178_27389297_27390095_27390240_27400533_27400775_27401256_27401364_27401523_27401675_27402618_27402678_27403432_27403542_27415868_27415948_27418087_27418197_27420395
transcript_43693.known	chr12	+	1843	15	FSM	ENSG00000029153.15	ENST00000261178.9	1843	15	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	8.46390897292975	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCTCAACTATTCTTAAG	27333042	False	NA	18	True	TTTAAA	-20	NA	27333054	27420590	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_27333104_27368261_27368413_27380246_27380405_27385480_27385561_27387227_27387321_27389178_27389297_27390095_27390240_27400533_27400775_27401256_27401364_27401523_27401675_27402618_27402678_27403432_27403542_27415868_27415948_27418087_27418197_27420395
transcript_43697.known	chr12	+	1954	15	FSM	ENSG00000029153.15	ENST00000395901.6	1954	15	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	12.9096151478387	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGATTTTTAACTCCAAA	27330851	True	NA	-39	True	NA	NA	NA	27332919	27420533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_27333137_27368261_27368413_27380246_27380405_27385480_27385561_27387227_27387321_27389178_27389297_27390095_27390240_27400533_27400775_27401256_27401364_27401523_27401675_27402618_27402678_27403432_27403542_27415868_27415948_27418087_27418197_27420395
transcript_43702.known	chr12	+	3208	28	FSM	ENSG00000110841.14	ENST00000542629.5	3208	28	0	0	0	0	multi-exon	TRUE	canonical	3	33	junction_11	20.7810454946774	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTAGCACCTGGATGAACA	27521909	True	NA	NA	False	NA	NA	NA	27524223	27692882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_27524366_27578151_27578240_27633361_27633461_27634909_27635116_27646061_27646149_27647728_27647843_27650009_27650142_27654721_27654815_27656615_27656731_27660883_27660946_27664361_27664438_27667165_27667321_27671430_27671547_27672426_27672484_27673766_27673828_27674191_27674222_27676427_27676600_27679488_27679640_27679932_27680062_27681545_27681697_27682386_27682499_27682614_27682704_27687384_27687508_27688297_27688424_27689014_27689204_27691748_27691929_27692590_27692657_27692795
transcript_43713.nic	chr12	+	1091	9	ISM	ENSG00000110841.14	ENST00000545381.5	1191	10	-21	2206	-21	-481	5prime_fragment	FALSE	canonical	3	71	junction_6	16.6728634313366	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAGAAGAAAAGGAATCTGA	27521806	True	NA	NA	False	AATGAA	-42	NA	27524120	27656642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_27524366_27578151_27578240_27633361_27633461_27634909_27635116_27646061_27646149_27647728_27647843_27650009_27650142_27654721_27654815_27656615
transcript_43714.nic	chr12	+	1179	9	ISM	ENSG00000110841.14	ENST00000545381.5	1191	10	-21	2118	-21	-393	5prime_fragment	FALSE	canonical	3	71	junction_6	16.6728634313366	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGAAGATATATTTCACA	27521806	True	NA	NA	False	NA	NA	NA	27524120	27656730	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_27524366_27578151_27578240_27633361_27633461_27634909_27635116_27646061_27646149_27647728_27647843_27650009_27650142_27654721_27654815_27656615
transcript_43718.known	chr12	+	875	6	FSM	ENSG00000110841.14	ENST00000535047.5	875	6	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_4	8.82269800004511	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGAGTAGTAGAGTCTCA	27521905	True	NA	NA	False	ATTAAA	-10	NA	27524219	27647977	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_27524366_27578151_27578240_27633361_27633461_27634909_27635116_27646061_27646149_27647728
transcript_43719.known	chr12	+	1191	10	FSM	ENSG00000110841.14	ENST00000545381.5	1191	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_9	30.0854749417245	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGTTTGGTGCATTTCC	27521827	True	NA	NA	False	AAAAAG	-17	NA	27524141	27658848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_27524366_27578151_27578240_27633361_27633461_27634909_27635116_27646061_27646149_27647728_27647843_27650009_27650142_27654721_27654815_27656615_27656731_27658815
transcript_43720.known	chr12	+	2805	4	FSM	ENSG00000110841.14	ENST00000545334.5	2805	4	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_3	0.816496580927726	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGGAAGTTGTTTTAAAT	27521843	True	NA	NA	False	GATAAA	-20	NA	27524157	27637319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_27524366_27578151_27578240_27633361_27633461_27634909
transcript_43721.known	chr12	+	1829	8	FSM	ENSG00000061794.13	ENST00000081029.8	1829	8	0	0	0	0	multi-exon	FALSE	canonical	3	569	junction_4	34.5903136140505	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCCTAATAGACTTATTT	27702320	True	NA	NA	False	AATAAA	-17	NA	27710831	27756295	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_27710956_27714779_27714821_27716290_27716459_27719807_27719869_27724046_27724187_27735446_27735557_27737538_27737609_27755180
transcript_43722.known	chr12	+	1715	7	FSM	ENSG00000061794.13	ENST00000538315.5	1715	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	227.640554871539	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGCCTAATAGACTTATT	27702323	True	NA	NA	False	AATAAA	-16	NA	27710834	27756294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_27710956_27714779_27714821_27716290_27716459_27719807_27719869_27724046_27724187_27737538_27737609_27755180
transcript_43723.known	chr12	+	1894	4	FSM	ENSG00000087448.11	ENST00000539176.1	1894	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	39.8859485143439	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAACATGACTGAATTGAA	27779326	False	NA	-2	True	AATAAA	-3	NA	27780047	27798156	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_27781203_27791707_27791902_27797246_27797350_27797714
transcript_43726.known	chr12	+	6490	3	FSM	ENSG00000087448.11	ENST00000381271.7	6490	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	18	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTGTTATCTAAGTTCT	27780217	False	NA	18	True	AATAAA	-15	NA	27780232	27803040	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_27781203_27791707_27791902_27797714
transcript_43730.known	chr12	+	3278	3	FSM	ENSG00000087448.11	ENST00000649445.1	3278	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	34	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCTCCAAAAAAAAAAAAAGA	27780256	False	NA	NA	False	NA	NA	NA	27780286	27800703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_27780382_27791707_27791902_27797714
transcript_43732.known	chr12	+	772	2	FSM	ENSG00000087448.11	ENST00000543254.1	772	2	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTATCTCTTTTTTTT	27780856	False	NA	NA	False	NA	NA	NA	27780866	27792143	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_27781203_27791707
transcript_43751.known	chr12	+	1301	11	ISM	ENSG00000123106.11	ENST00000536442.6	2519	13	-18	97530	-6	-4	5prime_fragment	FALSE	canonical	3	44	junction_1	33.9565899347976	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAGAAAAATAAGTCAGGT	28187476	True	NA	NA	False	AAAAAG	-33	NA	28190437	28452636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_28190642_28257201_28257246_28259363_28259443_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28391303_28391412_28450160_28450254_28450349_28450419_28452477
transcript_43763.known	chr12	+	2440	12	FSM	ENSG00000123106.11	ENST00000539107.5	2440	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	49.5668844396927	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTGTTACTTTTTGTT	28187465	True	NA	17	True	AATAAA	-18	NA	28190426	28550166	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_28190642_28257201_28257246_28259363_28259443_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28450160_28450254_28450349_28450419_28452477_28452655_28484051_28484166_28549062
transcript_43766.nic	chr12	+	2148	13	FSM	ENSG00000064763.12	ENST00000686419.1	2115	13	-24	-9	6	9	multi-exon	FALSE	canonical	2	10	junction_12	40.9389789809174	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCTCCTTCAATCGGG	29149079	False	NA	NA	False	ATTAAA	-27	NA	29149108	29341130	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_29149408_29270411_29270639_29293299_29293476_29297020_29297201_29307657_29307836_29309185_29309231_29311027_29311147_29311882_29311951_29316840_29317013_29321794_29321925_29332599_29332728_29333631_29333735_29340807
transcript_43767.known	chr12	+	3538	12	FSM	ENSG00000064763.12	ENST00000536681.8	3538	12	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_6	19.4000937204859	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCCTCTTCTAGTGTTGT	29148551	True	NA	NA	False	AATAAA	-18	NA	29149277	29335616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_29149408_29270411_29270639_29293299_29293476_29297020_29297201_29307657_29307836_29309185_29309231_29311027_29311147_29311882_29311951_29316840_29317013_29321794_29321925_29332599_29332728_29333631
transcript_43773.known	chr12	-	5033	14	FSM	ENSG00000087502.19	ENST00000360150.9	5033	14	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_4	29.5956977522711	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTGTCTTTTTAATA	-29376278	True	NA	NA	False	AATAAA	-16	NA	29381172	29337351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_29341219_29341733_29341817_29343119_29343283_29345442_29345541_29349078_29349178_29350012_29350069_29356381_29356478_29357622_29357725_29361644_29361686_29366876_29366948_29368240_29368288_29370113_29370223_29371527_29371671_29381114
transcript_43780.known	chr12	-	4228	20	FSM	ENSG00000133687.16	ENST00000551659.5	4228	20	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_15	13.1241672997954	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACACACTCTTCTTTTTT	-29782497	True	NA	NA	False	TATAAA	-15	NA	29783897	29505598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_29506987_29512042_29512121_29514481_29514605_29516348_29516487_29517426_29517572_29518471_29518608_29520617_29520721_29536208_29536318_29556856_29557001_29572104_29572219_29583406_29583575_29604177_29604300_29633146_29633337_29659879_29659984_29660803_29660886_29751665_29751873_29755708_29755886_29758703_29758778_29767897_29768076_29783449
transcript_43782.known	chr12	-	8846	18	FSM	ENSG00000133687.16	ENST00000539277.6	8846	18	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_13	16.8426464810145	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTCTGGTTTCAATCTC	-29782542	True	NA	-26	True	ATTAAA	-43	NA	29783942	29500839	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_29506987_29512042_29512121_29514481_29514605_29516348_29516487_29517426_29517572_29518471_29518608_29520617_29520721_29536208_29536318_29556856_29557001_29572104_29572219_29583406_29583575_29604177_29604300_29633146_29633337_29751665_29751873_29755708_29755886_29758703_29758778_29767897_29768076_29783449
transcript_43787.known	chr12	-	8805	18	FSM	ENSG00000133687.16	ENST00000256062.9	8805	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	22.9913478535854	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTCTGGTTTCAATCTC	NA	False	NA	-26	True	ATTAAA	-43	NA	29784759	29500839	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_29506987_29512042_29512121_29514481_29514605_29516348_29516487_29517426_29517572_29518471_29518608_29520617_29520721_29536208_29536318_29556856_29557001_29572104_29572219_29583406_29583575_29604177_29604300_29633146_29633337_29751665_29751873_29755708_29755886_29758703_29758778_29767897_29768076_29784307
transcript_43796.known	chr12	-	5208	25	FSM	ENSG00000133704.10	ENST00000256079.9	5208	25	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_13	21.8237494868931	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAACTTTTGTGTGTGA	-30690046	True	NA	-5	True	AATAAA	-21	NA	30695869	30628987	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_30630958_30631894_30632012_30634082_30634287_30636981_30637188_30639514_30639736_30649136_30649233_30652191_30652290_30652966_30653093_30656683_30656751_30661140_30661267_30662326_30662488_30663488_30663655_30665219_30665310_30665728_30665846_30666174_30666252_30669182_30669283_30670961_30671097_30673989_30674075_30674658_30674754_30676497_30676588_30680481_30680639_30681658_30681818_30684300_30684458_30690495_30690578_30695563
transcript_43832.nic	chr12	-	494	2	ISM	ENSG00000110888.18	ENST00000542550.5	770	5	-109	18372	-11	-18172	5prime_fragment	FALSE	canonical	3	17	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTAACTTTTTTTCTTC	-30750234	True	NA	11	True	NA	NA	NA	30754962	30753347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_30753560_30754680
transcript_43833.nic	chr12	-	405	2	ISM	ENSG00000110888.18	ENST00000540436.5	557	5	-74	18213	-11	-18191	5prime_fragment	FALSE	canonical	3	55	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAGAAACATCGAGAAAAAG	-30750234	True	NA	-8	True	NA	NA	NA	30754962	30753366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_30753560_30754750
transcript_43834.known	chr12	-	557	5	FSM	ENSG00000110888.18	ENST00000540436.5	557	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_4	55.1747224732486	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCTGAGAAGAAAAAGCTTC	-30750160	True	NA	NA	False	NA	NA	NA	30754888	30735153	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_30735207_30741019_30741107_30751070_30751134_30753343_30753560_30754750
transcript_43835.known	chr12	+	5506	8	FSM	ENSG00000110900.16	ENST00000546076.6	5506	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_7	5.52545131594678	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCTTCTGTTGAATTTTT	30926727	True	NA	5	True	AATAAA	-17	NA	30926747	30996599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_30926797_30953980_30954076_30963825_30964018_30978560_30978636_30979565_30979671_30982531_30982691_30983063_30983151_30991855
transcript_43849.known	chr12	-	2031	3	FSM	ENSG00000245614.5	ENST00000500527.1	2031	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	8.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGATTGTTTATAGTTTG	-31073634	False	NA	0	True	AATAAA	-23	NA	31073847	31020762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_31022030_31060659_31060771_31073194
transcript_43852.known	chr12	-	3188	2	FSM	ENSG00000245614.5	ENST00000669174.1	3188	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATATAAATTGAATTACAT	-31073287	True	NA	NA	False	AAAACA	-45	NA	31073786	31019433	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_31022030_31073194
transcript_43853.known	chr12	-	494	2	FSM	ENSG00000245614.5	ENST00000618041.2	810	2	305	11	279	-11	multi-exon	FALSE	canonical	3	18	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATGGCCACCTATCTTC	-31073294	False	NA	NA	False	ATTAAA	-13	NA	31073507	31060589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_31060771_31073194
transcript_43900.known	chr12	+	3920	27	FSM	ENSG00000013573.17	ENST00000542838.6	3920	27	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_8	95.1996656053	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTTATTGATATGTGCT	31067649	True	NA	23	True	AATAAA	-24	NA	31073859	31104799	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_31074092_31078389_31078538_31083812_31084062_31084582_31084670_31084968_31085127_31087937_31087984_31089043_31089152_31089402_31089491_31089885_31090095_31091718_31091872_31092845_31092893_31093244_31093325_31094589_31094635_31094754_31094823_31096340_31096380_31096636_31096746_31096858_31096991_31097884_31097998_31100634_31100708_31101026_31101131_31101832_31101983_31102242_31102312_31102426_31102528_31102935_31103021_31103316_31103396_31103576_31103732_31103806
transcript_43904.nic	chr12	+	3864	27	NIC	ENSG00000013573.17	novel	3717	27	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	112.158521850409	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGAGTTTTTTATTGA	31067624	True	NA	15	True	AATAAA	-16	NA	31073834	31104791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_31074092_31078462_31078538_31083812_31084062_31084582_31084670_31084968_31085127_31087937_31087984_31089043_31089152_31089402_31089491_31089885_31090095_31091718_31091872_31092845_31092893_31093244_31093325_31094589_31094635_31094754_31094823_31096340_31096380_31096636_31096746_31096858_31096991_31097884_31097998_31100634_31100708_31101026_31101131_31101832_31101983_31102242_31102312_31102426_31102528_31102935_31103021_31103316_31103396_31103576_31103732_31103806
transcript_43905.known	chr12	+	3751	27	FSM	ENSG00000013573.17	ENST00000545668.5	3751	27	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	130.556869424194	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGAGTTTTTTATTGA	31067683	False	NA	15	True	AATAAA	-16	NA	31073893	31104791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_31073970_31078389_31078538_31083812_31084062_31084582_31084670_31084968_31085127_31087937_31087984_31089043_31089152_31089402_31089491_31089885_31090095_31091718_31091872_31092845_31092893_31093244_31093325_31094589_31094635_31094754_31094823_31096340_31096380_31096636_31096746_31096858_31096991_31097884_31097998_31100634_31100708_31101026_31101131_31101832_31101983_31102242_31102312_31102426_31102528_31102935_31103021_31103321_31103396_31103576_31103732_31103806
transcript_43907.known	chr12	+	3717	27	FSM	ENSG00000013573.17	ENST00000228264.10	3717	27	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	114.109363093316	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGAGTTTTTTATTGA	31067649	True	NA	15	True	AATAAA	-16	NA	31073859	31104791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_31073970_31078462_31078538_31083812_31084062_31084582_31084670_31084968_31085127_31087937_31087984_31089043_31089152_31089402_31089491_31089885_31090095_31091718_31091872_31092845_31092893_31093244_31093325_31094589_31094635_31094754_31094823_31096340_31096380_31096636_31096746_31096858_31096991_31097884_31097998_31100634_31100708_31101026_31101131_31101832_31101983_31102242_31102312_31102426_31102528_31102935_31103021_31103316_31103396_31103576_31103732_31103806
transcript_43914.nnic	chr12	+	4049	27	NNC	ENSG00000013573.17	novel	652	9	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	115.564814417542	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGAGTTTTTTATTGA	31067969	False	NA	15	True	AATAAA	-16	NA	31074179	31104791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_31074549_31078389_31078538_31083812_31084062_31084582_31084670_31084968_31085127_31087937_31087984_31089043_31089152_31089402_31089491_31089885_31090095_31091718_31091872_31092845_31092893_31093244_31093325_31094589_31094635_31094754_31094823_31096340_31096380_31096636_31096746_31096858_31096991_31097884_31097998_31100634_31100708_31101026_31101131_31101832_31101983_31102242_31102312_31102426_31102528_31102935_31103021_31103316_31103396_31103576_31103732_31103806
transcript_43929.nic	chr12	+	4023	26	ISM	ENSG00000013573.17	ENST00000542838.6	3920	27	-36	8	-36	0	intron_retention	FALSE	canonical	3	144	junction_8	96.6664036778032	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGAGTTTTTTATTGA	31073811	False	NA	15	True	AATAAA	-16	NA	31073823	31104791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_31074092_31078389_31078538_31083812_31084062_31084582_31084670_31084968_31085127_31087937_31087984_31089043_31089152_31089402_31089491_31089885_31090095_31091718_31091872_31092845_31092893_31093244_31093325_31094589_31094635_31094754_31094823_31096340_31096380_31096636_31096746_31096858_31096991_31097884_31097998_31100634_31100708_31101026_31101131_31101832_31101983_31102242_31102312_31102426_31102528_31102935_31103021_31103316_31103396_31103576
transcript_43931.known	chr12	+	3724	26	FSM	ENSG00000013573.17	ENST00000350437.8	3724	26	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_20	122.398993459914	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGAGTTTTTTATTGA	31067687	False	NA	15	True	AATAAA	-16	NA	31073897	31104791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_31074092_31078389_31078538_31083812_31084062_31084582_31084670_31084968_31085127_31087937_31087984_31089043_31089152_31089402_31089491_31089885_31090095_31091718_31091872_31092845_31092893_31093244_31093325_31094589_31094635_31094754_31094823_31096340_31096380_31096636_31096746_31096858_31096991_31097884_31097998_31100634_31100708_31101026_31101131_31102242_31102312_31102426_31102528_31102935_31103021_31103316_31103396_31103576_31103732_31103806
transcript_43936.known	chr12	+	3603	26	FSM	ENSG00000013573.17	ENST00000536265.5	3603	26	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_18	114.950173553588	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCCGCAGGAGGCTGTGG	31067680	False	NA	NA	False	NA	NA	NA	31073890	31104136	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_31074092_31078389_31078538_31083812_31084062_31084582_31084670_31084968_31085127_31087937_31087984_31089043_31089152_31089402_31090095_31091718_31091872_31092845_31092893_31093244_31093325_31094589_31094635_31094754_31094823_31096340_31096380_31096636_31096746_31096858_31096991_31097884_31097998_31100634_31100708_31101044_31101131_31101832_31101983_31102242_31102312_31102426_31102528_31102935_31103021_31103316_31103396_31103576_31103732_31103806
transcript_4399.known	chr1	-	2552	10	FSM	ENSG00000088280.20	ENST00000495646.5	2552	10	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_8	22.9249984853992	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGGTTTCATTTATGT	-23436663	False	NA	-3	True	AATAAA	-18	NA	23436677	23428562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23429931_23431034_23431126_23431695_23431919_23433076_23433273_23433424_23433533_23433625_23433694_23434253_23434370_23434532_23434619_23435850_23436029_23436559
transcript_44.known	ERCC-00113	+	825	1	FSM	ERCC-00113A	DQ883663	825	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1689	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	825	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00113_+_0_800
transcript_4400.nnic	chr1	-	2077	7	NNC	ENSG00000007968.7	novel	550	2	NA	NA	-85	759	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	6.7433094413813	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCGGGCATGGTTGCAGG	-23530811	True	NA	NA	False	AATAAA	-6	NA	23531318	23505678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_23506186_23516334_23516528_23519015_23519131_23520912_23521072_23521836_23522057_23524382_23524489_23530541
transcript_4401.known	chr1	-	5196	7	FSM	ENSG00000007968.7	ENST00000361729.3	5196	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	5.93483127158829	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGGGCATCTTGTCTTT	-23530726	True	NA	-17	True	ATTAAA	-13	NA	23531233	23506437	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23510149_23516334_23516528_23519015_23519131_23520912_23521072_23521836_23522057_23524382_23524489_23530541
transcript_4402.known	chr1	-	950	3	FSM	ENSG00000117318.9	ENST00000374561.6	950	3	0	0	0	0	multi-exon	FALSE	canonical	3	4523	junction_1	107.5	3170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATGACACCCGTCTCCA	-23490266	True	NA	-19	True	AATAAA	-22	NA	23559501	23557925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23558416_23558934_23559020_23559126
transcript_44056.nic	chr12	+	739	4	ISM	ENSG00000013573.17	ENST00000535158.5	1718	7	-78	5227	-36	0	5prime_fragment	FALSE	canonical	3	177	junction_1	95.1571799124422	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAAGCGCCTGGTGAGCC	31073811	False	NA	NA	False	NA	NA	NA	31073823	31084656	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_31074092_31078389_31078538_31083812_31084062_31084582
transcript_4406.known	chr1	-	892	2	FSM	ENSG00000117318.9	ENST00000486541.1	892	2	0	0	0	0	multi-exon	FALSE	canonical	3	4738	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGGTCTTCTTTCCTCC	-23490208	True	NA	NA	False	NA	NA	NA	23559443	23558444	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23559020_23559126
transcript_44063.known	chr12	+	1193	9	FSM	ENSG00000013573.17	ENST00000542244.5	1193	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	181.093855155276	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCTCTCCTTGGGAAAAA	31071289	True	NA	NA	False	NA	NA	NA	31074219	31089618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_31074328_31078389_31078538_31083812_31084062_31084582_31084670_31084797_31084912_31085009_31085127_31087937_31087984_31089043_31089152_31089402
transcript_44069.known	chr12	+	4182	27	FSM	ENSG00000013573.17	ENST00000435753.6	4182	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	162.992449093627	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGAGTTTTTTATTGA	31067665	True	NA	15	True	AATAAA	-16	NA	31073875	31104791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_31074092_31078389_31078538_31083812_31084062_31084582_31084670_31084968_31085127_31086024_31086213_31087937_31087984_31089043_31089152_31089402_31089491_31089890_31090095_31091718_31091872_31092845_31092893_31093244_31093325_31094589_31094635_31094754_31094823_31096340_31096380_31096636_31096746_31096858_31096991_31097884_31097998_31100634_31100708_31100998_31101131_31101832_31101983_31102242_31102312_31102426_31102528_31102935_31103021_31103316_31103396_31103576
transcript_4407.known	chr1	+	1017	6	FSM	ENSG00000142676.14	ENST00000643754.2	1017	6	0	0	0	0	multi-exon	FALSE	canonical	3	6155	junction_1	2732.3762112857	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTCAGGTTTCTTTTAC	23576114	True	NA	NA	False	ATTAAA	-17	NA	23691805	23696835	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_23691830_23692608_23692760_23693806_23693914_23694659_23694792_23695797_23695909_23696343
transcript_44071.nic	chr12	-	744	7	FSM	ENSG00000177359.21	ENST00000688821.1	750	7	0	6	0	0	multi-exon	FALSE	canonical	2	20	junction_6	23.7726500182224	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTCTATGACTTTTTT	NA	False	NA	-4	True	ATTAAA	-16	NA	31119116	31111656	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_31111810_31112980_31113084_31114395_31114465_31114836_31114928_31116356_31116470_31117419_31117481_31118962
transcript_44077.nnic	chr12	-	3184	7	NNC	ENSG00000139146.14	novel	2941	6	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	canonical	3	439	junction_5	1124.21311987047	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGCTGTTTTGTGGCTTTG	NA	False	NA	-26	True	AATAAA	-24	NA	31326251	31280583	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_31282872_31287633_31287785_31293804_31293932_31295233_31295334_31298076_31298225_31304981_31305124_31326023
transcript_44081.known	chr12	-	1555	6	FSM	ENSG00000139146.14	ENST00000454658.6	1555	6	0	0	0	0	multi-exon	TRUE	canonical	3	99	junction_5	1120.88625649528	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCCCTCATGATAATAAA	-31305407	False	NA	-49	True	NA	NA	NA	31324162	31282061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_31282872_31287633_31287785_31293804_31293932_31295233_31295334_31298076_31298225_31323943
transcript_44085.known	chr12	-	2941	6	FSM	ENSG00000139146.14	ENST00000337682.9	2941	6	0	0	0	0	multi-exon	FALSE	canonical	3	2602	junction_5	179.216740289516	1691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGCTGTTTTGTGGCTTTG	-31307395	True	NA	-26	True	AATAAA	-24	NA	31326150	31280583	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_31282872_31287633_31287785_31293804_31293932_31295233_31295334_31298076_31298225_31326023
transcript_4409.known	chr1	+	660	6	FSM	ENSG00000142676.14	ENST00000374550.8	660	6	0	0	0	0	multi-exon	FALSE	canonical	3	1788	junction_1	4144.13989146119	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCAATTCTGTTGTGTG	23691716	False	NA	47	True	AATAAA	-44	NA	23691741	23696417	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_23691830_23692611_23692760_23693806_23693914_23694659_23694792_23695797_23695909_23696343
transcript_44095.known	chr12	-	1734	2	FSM	ENSG00000139146.14	ENST00000536836.1	1734	2	0	0	0	0	multi-exon	FALSE	canonical	3	584	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATTAACACC	-31307373	True	NA	NA	False	NA	NA	NA	31326128	31303494	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_31305124_31326023
transcript_44098.known	chr12	-	868	2	FSM	ENSG00000256232.1	ENST00000541749.1	868	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCTATACCTTAAGCTAAT	-31369276	False	NA	-5	True	AATAAA	-17	NA	31369301	31363480	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_31363796_31368748
transcript_4410.known	chr1	+	823	6	FSM	ENSG00000142676.14	ENST00000467075.2	823	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	4775.44131573198	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTTGTGTGTTCTGTGA	23576129	True	NA	55	True	AATAAA	-23	NA	23691820	23696425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_23692061_23692608_23692760_23693806_23693914_23694659_23694792_23695797_23695909_23696343
transcript_44101.known	chr12	-	9506	21	FSM	ENSG00000170456.16	ENST00000389082.10	9506	21	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	19.6780969608344	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTTGCTTCATTGTT	-31590313	True	NA	-5	True	AATAAA	-16	NA	31591136	31382225	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_31387787_31389323_31389499_31392266_31392394_31392613_31392697_31398174_31398363_31399653_31399773_31402497_31402644_31409262_31409385_31413435_31413565_31415366_31415449_31423596_31423676_31424534_31424688_31426292_31426425_31433154_31433249_31442774_31442926_31447537_31447770_31451939_31452477_31460193_31460382_31479588_31480256_31495809_31495920_31590705
transcript_44104.known	chr12	-	3132	9	FSM	ENSG00000170456.16	ENST00000354285.8	3132	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	23.4783810131789	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTGTTTTTGTTGTGTT	-31590991	False	823	NA	False	AATAAA	-23	NA	31591012	31432374	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_31433249_31442774_31442926_31447537_31447770_31451939_31452477_31460193_31460382_31479588_31480256_31495809_31495920_31499605_31499672_31590705
transcript_44108.nic	chr12	-	2727	6	ISM	ENSG00000170456.16	ENST00000354285.8	3132	9	-215	18928	-91	399	5prime_fragment	FALSE	canonical	3	28	junction_4	18.8955021102907	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACATTTTGCAGGTTTTCC	NA	False	NA	NA	False	AATAAA	-28	NA	31591227	31451302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_31452477_31460193_31460382_31479588_31480256_31495809_31495920_31499605_31499672_31590705
transcript_44110.nic	chr12	-	2328	6	ISM	ENSG00000170456.16	ENST00000354285.8	3132	9	-215	19327	-91	0	5prime_fragment	FALSE	canonical	3	28	junction_4	18.8955021102907	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATTGTGCGTTAAATTG	NA	False	NA	-25	True	AATAAA	-21	NA	31591227	31451701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_31452477_31460193_31460382_31479588_31480256_31495809_31495920_31499605_31499672_31590705
transcript_44112.nic	chr12	-	2657	5	ISM	ENSG00000170456.16	ENST00000389082.10	9506	21	-87	69077	-87	399	5prime_fragment	FALSE	canonical	3	24	junction_4	19.1882125274868	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACATTTTGCAGGTTTTCC	NA	False	NA	NA	False	AATAAA	-28	NA	31591223	31451302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_31452477_31460193_31460382_31479588_31480256_31495809_31495920_31590705
transcript_44113.nic	chr12	-	2258	5	ISM	ENSG00000170456.16	ENST00000389082.10	9506	21	-87	69476	-87	0	5prime_fragment	FALSE	canonical	3	24	junction_4	19.1882125274868	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATTGTGCGTTAAATTG	NA	False	NA	-25	True	AATAAA	-21	NA	31591223	31451701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_31452477_31460193_31460382_31479588_31480256_31495809_31495920_31590705
transcript_44119.known	chr12	-	1952	7	FSM	ENSG00000151743.11	ENST00000281471.11	1952	7	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_6	12.5797456254091	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAATCACATTTTCCCCTT	-31728110	True	NA	-3	True	AATAAA	-25	NA	31729021	31671141	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_31672378_31689006_31689119_31697360_31697418_31697739_31697958_31701862_31702008_31709292_31709426_31728970
transcript_44124.known	chr12	-	880	6	FSM	ENSG00000151743.11	ENST00000541931.5	880	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	29.9399398796992	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAATTAGCTAAGTCTTG	-31728199	True	NA	-76	True	NA	NA	NA	31729110	31672169	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_31672378_31689006_31689119_31697360_31697418_31697739_31697958_31701862_31702008_31728970
transcript_44128.known	chr12	+	2055	4	FSM	ENSG00000139160.13	ENST00000395763.7	2055	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	2.94392028877595	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTTCTGATGCTTGTT	31658993	True	NA	NA	False	TTTAAA	-40	NA	31659186	31668967	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_31659363_31661840_31662268_31666086_31666218_31667646
transcript_44129.known	chr12	-	430	3	FSM	ENSG00000151743.11	ENST00000422146.6	430	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	36.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCATCCGCCTCAGCCTC	-31728146	True	NA	NA	False	NA	NA	NA	31729057	31708957	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_31709168_31709292_31709426_31728970
transcript_44130.known	chr12	+	2088	1	FSM	ENSG00000276900.1	ENST00000619086.1	2088	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAATTTTATGTAATTT	NA	False	NA	13	True	AATAAA	-21	NA	31729116	31731204	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_31729100_31731200
transcript_44131.known	chr12	+	6234	6	FSM	ENSG00000174718.12	ENST00000312561.9	6234	6	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	64.4409807498303	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAAACCTTCACAGCTCA	31950902	True	NA	6	True	AATAAA	-23	NA	31959414	31993107	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_31959492_31960776_31960872_31970188_31970357_31980877_31985958_31987238_31987323_31992377
transcript_44133.known	chr12	+	965	5	FSM	ENSG00000174718.12	ENST00000535596.5	965	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	92.9122569955116	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGTGATGTGAATGTCAA	31950925	True	NA	-39	True	NA	NA	NA	31959437	31992941	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_31959492_31960776_31960872_31970188_31970357_31987238_31987323_31992377
transcript_44138.nic	chr12	+	2428	4	ISM	ENSG00000174718.12	ENST00000312561.9	6234	6	-281	10423	-236	-295	5prime_fragment	FALSE	canonical	3	98	junction_1	15.5848929700813	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCAAAATGAAAATATGCTA	NA	False	NA	NA	False	TATAAA	-8	NA	31959133	31982684	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_31959492_31960776_31960872_31970188_31970357_31980877
transcript_44141.nic	chr12	+	4495	4	ISM	ENSG00000174718.12	ENST00000312561.9	6234	6	-281	8356	-236	1772	5prime_fragment	FALSE	canonical	3	98	junction_1	15.5848929700813	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTTACCAAGGACAGAACAA	NA	False	NA	NA	False	CATAAA	-2	NA	31959133	31984751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_31959492_31960776_31960872_31970188_31970357_31980877
transcript_44142.nic	chr12	+	4788	4	ISM	ENSG00000174718.12	ENST00000312561.9	6234	6	-281	8063	-236	2065	5prime_fragment	FALSE	canonical	3	98	junction_1	15.5848929700813	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAACTCAAATCAGTTAG	NA	False	NA	NA	False	GATAAA	-2	NA	31959133	31985044	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_31959492_31960776_31960872_31970188_31970357_31980877
transcript_44143.nic	chr12	+	4872	4	ISM	ENSG00000174718.12	ENST00000312561.9	6234	6	-281	7979	-236	2149	5prime_fragment	FALSE	canonical	3	98	junction_1	15.5848929700813	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CATGATAAACAAGAACAGAA	NA	False	NA	NA	False	AGTAAA	-11	NA	31959133	31985128	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_31959492_31960776_31960872_31970188_31970357_31980877
transcript_44148.known	chr12	+	362	3	FSM	ENSG00000174718.12	ENST00000540924.5	362	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	37	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGAGTTCTTTCAGCTA	31950895	True	NA	5	True	AATAAA	-17	NA	31959407	31981060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_31959492_31960776_31960872_31980877
transcript_4415.known	chr1	+	2671	11	FSM	ENSG00000011007.13	ENST00000613537.5	4838	11	1	2166	1	-2130	multi-exon	FALSE	canonical	3	319	junction_10	36.7294160040695	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTTATATTATCCCCCA	23738841	True	NA	11	True	AATAAA	-15	NA	23743471	23759893	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_23743579_23749020_23749078_23749841_23749949_23750844_23752031_23752406_23752519_23754099_23754256_23754362_23754461_23755842_23756024_23756273_23756386_23756952_23757126_23759511
transcript_44151.known	chr12	+	883	2	FSM	ENSG00000174718.12	ENST00000543763.1	883	2	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATTTGAAACCTTCACAG	31987146	False	NA	2	True	AATAAA	-19	NA	31987165	31993103	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_31987323_31992377
transcript_44152.known	chr12	+	3194	10	FSM	ENSG00000151746.15	ENST00000395758.3	3194	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	26.0895892391327	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCTCGATAGCATAAGAG	32107240	False	NA	NA	False	AAAAAG	-38	NA	32107251	32377923	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_32107545_32216246_32216460_32293993_32294147_32305696_32306123_32327460_32328556_32334515_32334668_32337498_32337707_32338785_32338980_32367669_32367746_32377539
transcript_44154.known	chr12	+	9419	10	FSM	ENSG00000151746.15	ENST00000652176.1	9419	10	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	27.0842307543625	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGCTGCCTTTTTATCA	32102325	True	NA	20	True	AATAAA	-24	NA	32106846	32383633	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_32107545_32216246_32216460_32293993_32294147_32305696_32306123_32327460_32328556_32334515_32334668_32337498_32337817_32338785_32338980_32367669_32367746_32377539
transcript_44157.known	chr12	+	8811	9	FSM	ENSG00000151746.15	ENST00000548411.5	8811	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	20.9400185052449	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGCTGCCTTTTTATCA	32107140	False	NA	20	True	AATAAA	-24	NA	32107150	32383633	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_32107545_32216246_32216460_32293993_32294147_32305696_32306123_32327460_32328556_32334515_32334668_32337498_32337707_32367669_32367746_32377539
transcript_44159.nnic	chr12	+	3339	8	NIC	ENSG00000151746.15	novel	8811	9	NA	NA	-18	-20	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	24.6220408975207	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCTCAGATGGCTGGCT	32102295	True	NA	NA	False	AAAAAG	-18	NA	32106816	32377903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_32107545_32216246_32216460_32293993_32294147_32305696_32306123_32327460_32328556_32334515_32334668_32337498_32337707_32377539
transcript_44166.nic	chr12	+	3668	6	NIC	ENSG00000151746.15	novel	8811	9	NA	NA	-459	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_5	19.8433868076999	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTAGCTCTTCTGTTATC	32106361	False	NA	21	True	AATAAA	-22	NA	32106375	32333065	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_32107545_32216246_32216460_32293993_32294147_32305696_32306123_32327460_32328556_32332453
transcript_44167.nic	chr12	+	2838	6	ISM	ENSG00000151746.15	ENST00000395758.3	3194	10	-622	43372	-205	1486	5prime_fragment	FALSE	canonical	3	51	junction_5	11.6550418274668	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATGAAAATGAAAAAGCAAT	32106615	False	NA	NA	False	NA	NA	NA	32106629	32334551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_32107545_32216246_32216460_32293993_32294147_32305696_32306123_32327460_32328556_32334515
transcript_44168.known	chr12	+	1328	2	FSM	ENSG00000151746.15	ENST00000550207.1	1328	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATAATGTCTCTTTAGTTT	32102363	True	NA	NA	False	TATAAA	-25	NA	32106884	32108329	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_32107545_32107661
transcript_44172.known	chr12	+	1962	1	FSM	ENSG00000151746.15	ENST00000551848.1	1962	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGGAATCTAATTTTTGTG	32102313	True	NA	17	True	AATAAA	-28	NA	32106834	32108796	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_32106800_32108800
transcript_44173.known	chr12	+	766	2	FSM	ENSG00000151746.15	ENST00000547680.2	766	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTAGCTCTTCTGTTATC	NA	False	NA	21	True	AATAAA	-22	NA	32328401	32333065	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_32328556_32332453
transcript_44179.known	chr12	+	8465	17	FSM	ENSG00000139132.16	ENST00000534526.7	8465	17	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_6	8.85627425896466	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAAAGCTTTACATGTTA	32396886	True	NA	21	True	AATAAA	-17	NA	32399557	32646050	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_32399960_32564136_32564290_32576265_32576450_32581959_32582468_32598496_32598587_32601277_32601424_32602160_32602318_32607956_32608096_32610775_32610835_32611136_32611284_32619697_32619871_32624421_32624453_32624975_32625069_32625653_32625780_32633548_32633690_32638654_32638796_32640275
transcript_44183.nic	chr12	+	2779	15	ISM	ENSG00000139132.16	ENST00000534526.7	8465	17	-242	12373	-242	-5252	5prime_fragment	FALSE	canonical	3	50	junction_6	7.67848837164382	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATTTTAGAGGTAAGAAA	NA	False	NA	NA	False	AAGAAA	-12	NA	32399315	32633677	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_32399960_32564136_32564290_32576265_32576450_32581959_32582468_32598496_32598587_32601277_32601424_32602160_32602318_32607956_32608096_32610775_32610835_32611136_32611284_32619697_32619871_32624421_32624453_32624975_32625069_32625653_32625780_32633548
transcript_44184.known	chr12	+	2931	17	FSM	ENSG00000139132.16	ENST00000583694.2	2931	17	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	17.0091886931741	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGGAGCATTTTTTGA	32501750	True	NA	7	True	GATAAA	-17	NA	32502159	32640739	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_32502339_32564136_32564290_32576265_32576450_32581959_32582468_32598496_32598587_32601277_32601424_32602160_32602318_32607956_32608096_32610775_32610835_32611136_32611284_32619697_32619871_32624421_32624453_32624975_32625069_32625653_32625780_32633548_32633690_32638654_32638796_32640275
transcript_44190.nic	chr12	+	2184	11	ISM	ENSG00000139132.16	ENST00000534526.7	8465	17	-89	26243	-89	-6375	5prime_fragment	FALSE	canonical	3	50	junction_6	6.8330081223426	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGAATATCCACATACTT	32399396	False	NA	NA	False	AATGAA	-19	NA	32399468	32619807	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_32399960_32564136_32564290_32576265_32576450_32581959_32582468_32598496_32598587_32601277_32601424_32602160_32602318_32607956_32608096_32610775_32610835_32611136_32611284_32619697
transcript_44204.known	chr12	+	4514	20	FSM	ENSG00000087470.19	ENST00000549701.6	4514	20	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_15	68.5729488025652	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACGAAAAATTTTACGACTT	32671579	True	NA	NA	False	NA	NA	NA	32679300	32745650	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_32679466_32701414_32701563_32707366_32707414_32708152_32708225_32710928_32711016_32713208_32713372_32718642_32718764_32720663_32720796_32722426_32722634_32731013_32731135_32731355_32731512_32731853_32731944_32733714_32733808_32737104_32737162_32737864_32737943_32738263_32738297_32740063_32740241_32740408_32740519_32742588_32742749_32743353
transcript_44208.known	chr12	+	2393	19	FSM	ENSG00000087470.19	ENST00000547312.5	2393	19	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_15	97.485120738665	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAATCCAAATAATAAATGG	32671598	True	NA	-46	True	TATAAA	-40	NA	32679319	32743581	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_32679466_32701414_32701563_32707366_32707414_32708152_32708225_32710928_32711016_32713208_32713372_32718642_32718764_32720663_32720796_32722426_32722634_32731013_32731135_32731355_32731512_32731853_32731944_32733714_32733808_32737104_32737162_32737864_32737943_32740063_32740241_32740408_32740519_32742588_32742749_32743353
transcript_44212.known	chr12	+	4439	19	FSM	ENSG00000087470.19	ENST00000452533.6	4439	19	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_14	61.2944975678793	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTGTCAAAAAATGAATTC	32671478	True	NA	NA	False	AATAAA	-26	NA	32679199	32745552	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_32679466_32701414_32701563_32707366_32707414_32708152_32708225_32710928_32711016_32713208_32713372_32718642_32718764_32720663_32720796_32722426_32722634_32731013_32731135_32731355_32731512_32731853_32731944_32733714_32733808_32737104_32737162_32738263_32738297_32740063_32740241_32740408_32740519_32742588_32742749_32743353
transcript_44217.known	chr12	+	3101	18	FSM	ENSG00000087470.19	ENST00000266481.10	3101	18	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_14	94.3955822671649	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTCATAGCTTCATACCA	32671581	True	NA	NA	False	NA	NA	NA	32679302	32744350	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_32679466_32701414_32701563_32707366_32707414_32708152_32708225_32710928_32711016_32713208_32713372_32718642_32718764_32720663_32720796_32722426_32722634_32731013_32731135_32731355_32731512_32731853_32731944_32733714_32733808_32737104_32737162_32740063_32740241_32740408_32740519_32742588_32742749_32743353
transcript_4422.known	chr1	+	5154	11	FSM	ENSG00000011007.13	ENST00000613537.5	4838	11	-316	0	-293	0	multi-exon	FALSE	canonical	3	319	junction_10	36.7294160040695	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGTGTCTTCCTTACT	23742950	True	NA	11	True	AATAAA	-13	NA	23743154	23762059	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_23743579_23749020_23749078_23749841_23749949_23750844_23752031_23752406_23752519_23754099_23754256_23754362_23754461_23755842_23756024_23756273_23756386_23756952_23757126_23759511
transcript_44230.known	chr12	-	2117	5	FSM	ENSG00000139131.13	ENST00000324868.13	2117	5	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_4	23.2486558751253	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	-32754276	True	NA	NA	False	NA	NA	NA	32755897	32746543	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_32747364_32749936_32750108_32750718_32750875_32753917_32754086_32755095
transcript_44237.nic	chr12	+	381	2	ISM	ENSG00000087470.19	ENST00000550011.5	576	3	-101	4558	15	-4558	5prime_fragment	FALSE	canonical	3	420	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACAGGAGAAGAAAATGGT	32671493	True	NA	NA	False	GATAAA	-8	NA	32679214	32701544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_32679466_32701414
transcript_44238.known	chr12	-	4229	13	FSM	ENSG00000057294.16	ENST00000340811.9	4229	13	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_5	10.8282039138539	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGACCAAAGTAGTGTTGC	-32895234	True	NA	-24	True	AATAAA	-26	NA	32896777	32790754	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_32792493_32792643_32792732_32796108_32796299_32802402_32802557_32821355_32821530_32822466_32822632_32824044_32824163_32841027_32841206_32850765_32850974_32868926_32869063_32877845_32878544_32878919_32879033_32896508
transcript_4424.known	chr1	-	1074	4	FSM	ENSG00000236810.7	ENST00000427796.6	1112	4	38	0	2	0	multi-exon	FALSE	canonical	3	10	junction_2	4.54606056566195	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGTGGGGAGTTCTGTGC	-23777653	True	NA	NA	False	NA	NA	NA	23778287	23760381	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23761152_23772110_23772167_23772267_23772427_23778198
transcript_44248.known	chr12	-	1563	2	FSM	ENSG00000057294.16	ENST00000546741.2	1563	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAGAAATTCCAGGAAGAAA	-32896551	False	NA	NA	False	NA	NA	NA	32896601	32893308	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_32894779_32896508
transcript_44249.nic	chr12	-	829	2	ISM	ENSG00000110975.8	ENST00000539102.1	2433	9	-359	50028	-186	-18503	5prime_fragment	FALSE	canonical	2	4	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAGGAAAATGAAAAGCCA	NA	False	NA	NA	False	AAAAAG	-4	NA	33440005	33426300	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_33426496_33439371
transcript_4425.known	chr1	-	940	4	FSM	ENSG00000236810.7	ENST00000664563.2	970	4	28	2	-6	-2	multi-exon	FALSE	canonical	3	11	junction_2	4.10960933531265	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAAGTTGCCTTCAGGGC	-23777662	True	NA	-23	True	ATTAAA	-18	NA	23778296	23760520	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23761152_23772110_23772167_23772271_23772427_23778198
transcript_44250.known	chr12	+	2913	3	FSM	ENSG00000139133.7	ENST00000266483.7	2913	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGACATATTTTGTGAT	34021417	True	NA	9	True	AATAAA	-24	NA	34022495	34028302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_34022771_34023961_34024160_34025862
transcript_44256.known	chr12	-	6601	37	FSM	ENSG00000139116.19	ENST00000361961.7	6601	37	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	27.1270871643951	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTACTGTATTGTTCTT	-39443373	False	NA	-3	True	AATAAA	-18	NA	39443390	39293228	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_39294518_39301479_39301680_39302964_39303136_39304820_39304939_39307564_39307730_39309585_39309767_39311416_39311554_39315228_39315241_39315931_39315971_39318072_39318202_39319905_39320014_39322667_39322883_39325838_39325894_39326263_39326325_39330241_39330263_39330745_39330912_39331689_39331792_39332213_39332409_39332590_39332745_39332892_39333108_39333211_39333281_39337095_39337204_39340164_39340365_39340905_39341095_39341504_39341623_39342033_39342125_39351776_39351981_39356831_39356896_39357247_39357438_39358177_39358374_39363097_39363214_39366349_39366518_39367029_39367165_39367882_39368033_39369728_39369912_39370038_39370262_39442926
transcript_44263.known	chr12	-	7221	10	FSM	ENSG00000151229.13	ENST00000280871.9	7221	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	15.930404193798	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTTCCCTTGCACTTAT	-40104990	True	NA	-3	True	AATAAA	-23	NA	40106081	39755024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_39760253_39764459_39764613_39764736_39764859_39830102_39830229_39864761_39864883_39871797_39871962_39951256_39951366_40028300_40028510_40048050_40048211_40105252
transcript_44267.nic	chr12	-	2435	7	ISM	ENSG00000151229.13	ENST00000280871.9	7221	10	-22	74383	-14	0	5prime_fragment	FALSE	canonical	3	42	junction_6	11.0151410945722	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATT	-40105012	True	NA	NA	False	AAAAAG	-9	NA	40106103	39829407	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_39830229_39864761_39864883_39871797_39871962_39951256_39951366_40028300_40028510_40048050_40048211_40105252
transcript_44271.known	chr12	-	3082	4	FSM	ENSG00000151229.13	ENST00000380858.1	3082	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	13.9124245031395	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCACTTTTTTCCTGAAG	-40104998	True	NA	NA	False	AATAAA	-18	NA	40106089	39949489	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_39951366_40028300_40028510_40048050_40048211_40105252
transcript_44275.known	chr12	-	7492	8	FSM	ENSG00000151233.11	ENST00000398675.8	7492	8	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_6	17.2780384374181	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGTCTGGATTATTTT	-42144552	True	NA	NA	False	AATAAA	-33	NA	42144874	42081844	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_42087948_42097441_42097615_42097909_42098034_42105817_42106070_42109565_42109692_42118999_42119172_42129758_42129852_42144425
transcript_44277.known	chr12	-	1937	7	FSM	ENSG00000151233.11	ENST00000280876.6	1937	7	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_6	10.4469559628099	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGTGTGTGCGTGTTTG	-42144390	False	NA	-92	True	NA	NA	NA	42144712	42087144	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_42087948_42097441_42097615_42097909_42098034_42105817_42106070_42109565_42109692_42118999_42119172_42144425
transcript_4428.known	chr1	+	1590	6	FSM	ENSG00000057757.10	ENST00000246151.9	1590	6	0	0	0	0	multi-exon	TRUE	canonical	3	367	junction_4	32.7377457990009	313	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTATTTTCTTTTGAG	23768532	True	NA	17	True	AATAAA	-17	NA	23778417	23788232	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_23778714_23779437_23779482_23779863_23779942_23785674_23785780_23786314_23786424_23787274
transcript_44281.known	chr12	-	4096	4	FSM	ENSG00000015153.15	ENST00000534854.7	4096	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	2.16024689946929	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCAGTCTCAGGTATTC	-42238085	True	NA	NA	False	AATAAA	-18	NA	42238248	42157103	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_42160827_42161612_42161766_42237598_42237725_42238154
transcript_44302.known	chr12	+	1693	11	FSM	ENSG00000134283.18	ENST00000395580.7	1693	11	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_2	146.49505111095	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTAGAGAATATTTGCTT	42320956	True	NA	15	True	AATAAA	-15	NA	42326144	42441950	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_42326230_42332659_42332703_42335882_42335975_42351884_42352050_42355160_42355223_42374862_42375075_42384939_42384997_42387455_42387536_42393569_42393690_42398853_42398995_42441314
transcript_44307.known	chr12	+	1859	10	FSM	ENSG00000134283.18	ENST00000358314.12	1859	10	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_5	123.890632772978	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAAGTTTCGGACTGT	42320978	True	NA	NA	False	AATAAA	-34	NA	42326166	42442181	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_42326230_42335882_42335975_42351884_42352050_42355160_42355223_42374862_42375075_42384939_42384997_42387455_42387536_42393569_42393690_42398853_42398995_42441314
transcript_44313.known	chr12	+	1863	10	FSM	ENSG00000134283.18	ENST00000613154.4	1863	10	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_2	126.929649028386	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAAGTTTCGGACTGT	42320960	True	NA	NA	False	AATAAA	-34	NA	42326148	42442181	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_42326230_42332659_42332703_42335882_42335975_42351884_42352050_42355160_42355223_42374862_42375075_42387455_42387536_42393569_42393690_42398853_42398995_42441314
transcript_44315.known	chr12	+	1583	9	FSM	ENSG00000134283.18	ENST00000449194.6	1583	9	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_2	51.7107338953916	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTTTGAGAGTAATTCT	42320979	True	NA	28	True	AATAAA	-28	NA	42326167	42441963	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_42326230_42335882_42335975_42351884_42352050_42355160_42355223_42374862_42375075_42387455_42387536_42393569_42393690_42398853_42398995_42441314
transcript_44327.nic	chr12	+	1018	8	NIC	ENSG00000134283.18	novel	1095	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	139	junction_2	96.2479790405375	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTAAAAATTTTTTTTC	42320959	True	NA	50	True	AAAACA	-1	NA	42326147	42441543	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_42326230_42335882_42335975_42355160_42355223_42374862_42375075_42387455_42387536_42393569_42393690_42398853_42398995_42441314
transcript_44329.nic	chr12	+	1413	8	NIC	ENSG00000134283.18	novel	1693	11	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	139	junction_2	96.2479790405375	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTAGAGAATATTTGCTT	42320971	True	NA	15	True	AATAAA	-15	NA	42326159	42441950	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_42326230_42335882_42335975_42355160_42355223_42374862_42375075_42387455_42387536_42393569_42393690_42398853_42398995_42441314
transcript_44337.nic	chr12	+	588	5	ISM	ENSG00000134283.18	ENST00000449194.6	1583	9	-1	66895	0	0	5prime_fragment	FALSE	canonical	3	307	junction_2	35.1594581869516	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGAAGTATGTATTTTAAG	42320978	True	NA	NA	False	NA	NA	NA	42326166	42375068	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_42326230_42335882_42335975_42351884_42352050_42355160_42355223_42374862
transcript_44338.nic	chr12	+	811	5	ISM	ENSG00000134283.18	ENST00000395580.7	1693	11	15	86349	2	-77	5prime_fragment	FALSE	canonical	3	87	junction_2	108.771262289265	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGGGCATGGTGGCAG	42320971	True	NA	NA	False	AATACA	-19	NA	42326159	42355601	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_42326230_42332659_42332703_42335882_42335975_42351884_42352050_42355160
transcript_4434.known	chr1	+	1635	10	FSM	ENSG00000011009.11	ENST00000374514.8	1635	10	0	0	0	0	multi-exon	TRUE	canonical	3	1879	junction_1	100.551933636428	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCAGGCCTGGCTGATTC	23769762	True	NA	15	True	ATTAAA	-17	NA	23791144	23795539	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_23791251_23792656_23792761_23793007_23793040_23793150_23793217_23793704_23793753_23793859_23793931_23794062_23794137_23794223_23794326_23794426_23794601_23794681
transcript_44340.known	chr12	+	847	4	FSM	ENSG00000134283.18	ENST00000549774.5	847	4	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_2	5.90668171555645	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGGAGGTTGCAGTGAGC	42320969	True	NA	-59	True	NA	NA	NA	42326157	42355678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_42326230_42335882_42335975_42351884_42352050_42355160
transcript_44342.known	chr12	+	648	4	FSM	ENSG00000134283.18	ENST00000551406.5	648	4	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_2	106.434121512897	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAGCATGTAAAAGGTTT	42320983	True	NA	NA	False	NA	NA	NA	42326171	42375298	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_42326230_42335882_42335975_42355160_42355223_42374862
transcript_44343.known	chr12	+	3377	12	FSM	ENSG00000134283.18	ENST00000432191.6	3377	12	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_10	156.860890100035	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATTGTCTTTTCTCTTA	42320989	True	NA	18	True	AATAAA	-15	NA	42326177	42448618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_42326230_42335882_42335975_42355160_42355223_42374862_42375075_42384939_42384997_42387455_42387536_42393569_42393690_42398853_42398995_42441314_42441430_42442640_42442742_42445972_42446291_42446591
transcript_44344.known	chr12	-	1808	8	FSM	ENSG00000139168.9	ENST00000266529.8	1808	8	0	0	0	0	multi-exon	FALSE	canonical	3	520	junction_3	21.8108753999991	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAAAATCTTGTGTTTCC	-42321225	True	NA	NA	False	ATTAAA	-19	NA	42326094	42312085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_42313199_42313689_42313766_42313873_42313987_42317339_42317448_42317786_42317899_42322417_42322447_42324018_42324105_42325923
transcript_44348.known	chr12	-	1199	8	FSM	ENSG00000139168.9	ENST00000552235.2	1199	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	195.462820724849	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGTCTTTAAATATGG	-42321278	True	NA	-15	True	AATAAA	-12	NA	42326147	42312780	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_42313232_42313689_42313766_42313873_42313987_42317339_42317448_42317786_42317899_42322417_42322447_42324018_42324105_42325923
transcript_44349.known	chr12	-	1661	7	FSM	ENSG00000139168.9	ENST00000676501.1	1661	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	207.130930143767	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAATAGAAATAAGTTAATAC	-42321249	True	NA	NA	False	AGTAAA	-3	NA	42326118	42312170	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_42313199_42313689_42313766_42313873_42313987_42317339_42317448_42317786_42317899_42322417_42322447_42325923
transcript_44353.known	chr12	-	3778	9	FSM	ENSG00000139174.12	ENST00000640055.1	3778	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	22.8879744625862	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAATATATGGTAAAAACA	-42483531	True	NA	-35	True	TATAAA	-33	NA	42484298	42458824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_42460666_42464394_42465259_42466193_42466381_42468625_42468830_42469449_42469588_42470245_42470360_42472384_42472562_42483757_42483986_42484273
transcript_44358.known	chr12	-	4278	8	FSM	ENSG00000139174.12	ENST00000640132.1	4278	8	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_7	19.695643359559	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTAATAAATAACAAAACTA	-42483644	False	NA	-49	True	AATAAA	-3	NA	42483672	42458371	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_42460666_42464394_42465259_42466193_42466381_42468625_42468830_42469449_42469588_42470245_42470360_42472384_42472565_42483375
transcript_44359.known	chr12	-	5761	8	FSM	ENSG00000139174.12	ENST00000639589.1	5761	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_7	19.0102013430169	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCGACTTAGTCTATTCTC	-42484416	False	NA	-9	True	AATAAA	-10	NA	42484444	42456762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_42460666_42464394_42465259_42466193_42466381_42468625_42468830_42469449_42469588_42470245_42470360_42472384_42472565_42484273
transcript_4436.known	chr1	+	868	10	FSM	ENSG00000011009.11	ENST00000374503.7	868	10	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_8	659.006341414627	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCCTGGAGGCGGGCCCC	23769820	True	NA	NA	False	NA	NA	NA	23791202	23794955	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_23791251_23792656_23792761_23793007_23793040_23793150_23793217_23793704_23793753_23793859_23793931_23794062_23794137_23794223_23794326_23794551_23794601_23794681
transcript_44360.known	chr12	-	3803	8	FSM	ENSG00000139174.12	ENST00000639958.1	3803	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	21.0693703595276	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCTGGAATATATGGTAAA	-42589630	True	NA	-39	True	TATAAA	-29	NA	42589746	42458828	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_42460666_42464394_42465259_42466193_42466381_42468625_42468830_42469449_42469588_42470245_42470360_42472384_42472562_42589464
transcript_44369.known	chr12	-	3311	8	FSM	ENSG00000139174.12	ENST00000552240.6	3311	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_7	10.6022716087311	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGCTACAGATTGAAAAAAAA	-42483967	False	NA	NA	False	NA	NA	NA	42483995	42459279	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_42460666_42464394_42465259_42466193_42466381_42468625_42468830_42469449_42469588_42470245_42470360_42472384_42472565_42483757
transcript_44372.known	chr12	-	4364	9	FSM	ENSG00000129317.15	ENST00000416848.6	4364	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	15.3577138598165	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATATTGTAGTACCATT	-43756871	True	NA	47	True	AATAAA	-20	NA	43758758	43728606	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_43730703_43731704_43731759_43736380_43736662_43738309_43738392_43742456_43742556_43746045_43746239_43748449_43748610_43754335_43755262_43758285
transcript_44373.known	chr12	-	3313	9	FSM	ENSG00000129317.15	ENST00000551923.5	3313	9	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_8	15.039531242695	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGAAGAGAAGCTATATG	-43756886	True	NA	NA	False	AATAAA	-9	NA	43758773	43729257	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_43730703_43731704_43731759_43736380_43736662_43738309_43738392_43742456_43742556_43746045_43746239_43748449_43748610_43754335_43755262_43758700
transcript_44374.known	chr12	-	13567	9	FSM	ENSG00000129317.15	ENST00000344862.10	13567	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_8	7.44878345771979	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGGTTTGAGGAAACTAC	-43756903	True	NA	42	True	AATAAA	-15	NA	43758790	43718991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_43730703_43731704_43731759_43736380_43736662_43738309_43738392_43742456_43742556_43746045_43746239_43748449_43748610_43754335_43755262_43758729
transcript_44380.known	chr12	-	1873	8	FSM	ENSG00000129317.15	ENST00000431332.7	1873	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	16.4142794976987	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTCTTGACCATTTGTAA	-43756906	True	NA	NA	False	AATACA	-37	NA	43758793	43729762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_43730703_43731704_43731759_43736380_43736662_43738309_43738392_43742456_43742556_43746045_43746239_43748449_43748610_43758729
transcript_44381.known	chr12	-	1149	4	FSM	ENSG00000129317.15	ENST00000553166.1	1149	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	8.04155872120988	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAAGAATGAATGT	-43756880	True	NA	NA	False	AAAAAG	-6	NA	43758767	43746213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_43746239_43748449_43748610_43754335_43755262_43758729
transcript_44384.nic	chr12	-	1277	3	ISM	ENSG00000129317.15	ENST00000551923.5	3313	9	-116	19190	-96	-2234	5prime_fragment	FALSE	canonical	3	5	junction_2	19.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAGATATTAAGAAATTT	NA	False	NA	NA	False	NA	NA	NA	43758889	43748447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_43748610_43754335_43755262_43758700
transcript_44385.nic	chr12	-	1182	3	ISM	ENSG00000129317.15	ENST00000553166.1	1149	4	-56	2234	-30	-2234	5prime_fragment	FALSE	canonical	3	30	junction_2	7	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAGATATTAAGAAATTT	-43756936	True	NA	NA	False	NA	NA	NA	43758823	43748447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_43748610_43754335_43755262_43758729
transcript_4439.nic	chr1	+	1636	10	NIC	ENSG00000011009.11	novel	717	9	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_1	637.72688530978	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCAGGCCTGGCTGATTC	23770528	False	NA	15	True	ATTAAA	-17	NA	23791910	23795539	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_23792018_23792656_23792761_23793007_23793040_23793150_23793217_23793704_23793753_23793859_23793931_23794062_23794137_23794223_23794326_23794426_23794601_23794681
transcript_44392.known	chr12	+	1703	13	FSM	ENSG00000198001.15	ENST00000547101.5	1703	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	8.2474743608776	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCATTAGTATCACCCCCA	43758486	True	NA	NA	False	TATAAA	-31	NA	43758960	43786903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_43759017_43768102_43768273_43771037_43771105_43771219_43771366_43772179_43772363_43772911_43773073_43773964_43774030_43777629_43777745_43778192_43778303_43782306_43782491_43783661_43783725_43786398_43786558_43786679
transcript_44393.known	chr12	+	4284	12	FSM	ENSG00000198001.15	ENST00000613694.5	4284	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	6.77257473897788	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAGTGCTTTAATTTTT	43758476	True	NA	5	True	ATTAAA	-16	NA	43758950	43789541	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_43759017_43768102_43768273_43771219_43771366_43772179_43772363_43772911_43773073_43773964_43774030_43777629_43777745_43778192_43778303_43782306_43782491_43783661_43783725_43786398_43786558_43786679
transcript_44399.known	chr12	-	3012	10	FSM	ENSG00000151239.14	ENST00000552521.5	3012	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	92.5011845102671	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTATGTTCTGTTGGT	-43804320	True	NA	-1	True	AATAAA	-17	NA	43806287	43793722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_43795756_43796975_43797098_43797301_43797453_43797707_43797834_43799397_43799503_43800434_43800531_43802285_43802465_43804494_43804573_43805830_43805886_43806220
transcript_44402.known	chr12	-	3320	9	FSM	ENSG00000151239.14	ENST00000547459.5	3320	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	75.352504935138	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGTGTATGTTCTGTTG	-43804295	True	NA	-3	True	AATAAA	-15	NA	43806262	43793724	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_43795756_43796975_43797098_43797301_43797453_43797707_43797834_43799397_43799503_43800434_43800531_43802285_43802465_43804494_43804573_43805830
transcript_44403.known	chr12	-	2987	9	FSM	ENSG00000151239.14	ENST00000395510.7	2987	9	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_7	27.4806750280993	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTATGTTCTGTTGGT	-43804350	True	NA	-1	True	AATAAA	-17	NA	43806317	43793722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_43795756_43796975_43797098_43797301_43797453_43797707_43797834_43799397_43799503_43800434_43800531_43802285_43802465_43804494_43804573_43806220
transcript_44406.known	chr12	+	2775	8	FSM	ENSG00000139173.10	ENST00000266534.8	2775	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	2.81395937194174	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTATGTGATGTAGTTT	43836002	False	NA	2	True	AATAAA	-17	NA	43836080	44389758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_43836197_43844623_43844929_43944209_43944343_44143524_44143625_44211289_44211388_44299579_44299740_44376594_44376725_44388025
transcript_44409.known	chr12	-	3196	21	FSM	ENSG00000184613.11	ENST00000452445.6	3196	21	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_20	38.3685743806048	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACACATGTGAGTCTGAG	-44873391	True	NA	-12	True	AATAAA	-16	NA	44876355	44508281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_44508985_44520004_44520230_44521999_44522177_44523290_44523485_44532580_44532722_44607168_44607265_44610847_44610971_44665483_44665610_44703725_44703855_44711291_44711395_44714649_44714742_44774746_44774850_44776021_44776151_44777041_44777125_44777241_44777315_44779662_44779760_44779848_44780023_44815985_44816137_44875224_44875354_44875814_44875901_44876293
transcript_44412.known	chr12	-	3203	20	FSM	ENSG00000184613.11	ENST00000395487.6	3203	20	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_19	53.004520791879	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGAGTCTGAGTATCTTG	-44875639	False	NA	-5	True	AATAAA	-23	NA	44875654	44508274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_44508985_44520004_44520230_44521999_44522177_44523290_44523485_44532580_44532722_44607168_44607265_44610847_44610971_44665483_44665610_44703725_44703855_44711291_44711395_44714649_44714742_44774746_44774850_44776021_44776151_44777041_44777125_44777241_44777315_44779662_44779760_44779848_44780023_44815985_44816137_44875224_44875354_44875506
transcript_44413.known	chr12	-	3553	20	FSM	ENSG00000184613.11	ENST00000429094.7	3553	20	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_11	26.1662064524226	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATGTGAGTCTGAGTATC	-44873351	True	NA	-8	True	AATAAA	-20	NA	44876315	44508277	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_44508985_44520004_44520230_44521999_44522177_44523290_44523485_44532580_44532722_44607168_44607265_44610847_44610971_44665483_44665610_44703725_44703855_44711291_44711395_44714649_44714742_44774746_44774850_44776021_44776151_44777041_44777125_44777241_44777315_44779662_44779760_44779848_44780023_44815985_44816137_44875224_44875354_44875814
transcript_44425.known	chr12	-	1938	13	FSM	ENSG00000184613.11	ENST00000547751.5	1938	13	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_4	20.9854446912351	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTTAAAAATTTCTTTGA	-44873351	True	NA	NA	False	AATAAA	-22	NA	44876315	44665435	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_44665610_44703725_44703855_44711291_44711395_44714649_44714742_44774746_44774850_44776021_44776151_44777041_44777125_44777241_44777315_44779662_44779760_44779848_44780023_44815985_44816137_44875224_44875354_44875814
transcript_44427.known	chr12	+	5504	21	FSM	ENSG00000177119.17	ENST00000423947.7	5504	21	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	99.8173832556234	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGACCTGTGAAGAGGGAG	45210843	True	NA	NA	False	NA	NA	NA	45216084	45431782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_45216392_45270461_45270525_45302013_45302094_45331294_45331424_45347021_45347088_45348027_45348316_45348517_45348632_45350658_45350775_45357289_45357425_45367687_45367794_45378052_45378114_45388160_45388304_45390420_45390499_45401794_45402021_45403071_45403242_45403438_45403537_45409356_45409488_45416698_45416905_45421070_45421274_45422956_45423063_45429104
transcript_44428.known	chr12	+	5998	20	FSM	ENSG00000177119.17	ENST00000320560.13	5998	20	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_18	79.0621621558919	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTATGGTCTATTCTATAT	45210853	True	NA	18	True	AATAAA	-18	NA	45216094	45432349	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_45216392_45302013_45302094_45331294_45331424_45347021_45347088_45348027_45348316_45348517_45348632_45350658_45350775_45357289_45357425_45367687_45367794_45378052_45378114_45388160_45388304_45390420_45390499_45401794_45402021_45403071_45403242_45403438_45403537_45409356_45409488_45416698_45416905_45421070_45421274_45422956_45423063_45429104
transcript_44431.known	chr12	+	5661	19	FSM	ENSG00000177119.17	ENST00000681817.1	5661	19	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_17	92.8888224348513	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTTTAATAAATTCATTT	45216288	False	NA	-12	True	NA	NA	NA	45216321	45432319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_45216392_45331294_45331424_45347021_45347088_45348027_45348316_45348517_45348632_45350658_45350775_45357289_45357425_45367687_45367794_45378052_45378114_45388160_45388304_45390420_45390499_45401794_45402021_45403071_45403242_45403438_45403537_45409356_45409488_45416698_45416905_45421070_45421274_45422956_45423063_45429104
transcript_44436.known	chr12	+	3558	20	FSM	ENSG00000177119.17	ENST00000425752.6	3558	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	83.3697501223139	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTTTGTATTTTTAGT	45210778	True	NA	NA	False	NA	NA	NA	45216019	45440404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_45216392_45302013_45302094_45331294_45331424_45347021_45347088_45348027_45348316_45348517_45348632_45350658_45350775_45357289_45357425_45367687_45367794_45378052_45378114_45388160_45388304_45390420_45390499_45401794_45402021_45403071_45403242_45403438_45403537_45409356_45409488_45416698_45416905_45421070_45421274_45422956_45423063_45439674
transcript_44437.known	chr12	+	3736	19	FSM	ENSG00000177119.17	ENST00000680498.1	3736	19	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_18	96.4127732175886	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATGAGCATTTTAATAAA	45210853	True	NA	-19	True	NA	NA	NA	45216094	45432312	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_45216392_45331294_45331424_45347021_45347088_45348027_45348316_45348517_45348632_45350658_45350775_45357289_45357425_45367687_45367794_45378052_45378114_45388160_45388304_45390420_45390499_45401794_45402021_45403071_45403242_45403438_45403537_45409356_45409488_45416698_45416905_45421070_45421274_45422956_45423063_45431249
transcript_44439.known	chr12	-	277	3	FSM	ENSG00000134297.7	ENST00000545609.3	876	3	-17	616	0	-393	multi-exon	FALSE	canonical	0	0	junction_1	19.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGGGTGATCGGACCTA	-45215108	True	NA	NA	False	NA	NA	NA	45216041	45176426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_45176434_45190793_45190962_45215939
transcript_44440.known	chr12	-	1839	3	FSM	ENSG00000134297.7	ENST00000256692.6	1874	3	18	17	18	-17	multi-exon	FALSE	canonical	3	11	junction_2	4.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAAAAACCATGA	-45215073	True	NA	NA	False	AATAAA	-28	NA	45216006	45173063	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_45174643_45176240_45176434_45215939
transcript_44443.known	chr12	-	487	2	FSM	ENSG00000134297.7	ENST00000550498.1	487	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGGTTTTATGCCCTGGGC	-45215093	True	NA	NA	False	NA	NA	NA	45216026	45176033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_45176434_45215939
transcript_44444.known	chr12	+	8598	21	FSM	ENSG00000189079.17	ENST00000334344.11	8598	21	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_13	15.2230089010025	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTTTTGGATAAGTGAC	45727571	True	NA	16	True	AATAAA	-17	NA	45729705	45908037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_45729929_45730043_45730138_45731216_45731315_45811417_45811552_45817669_45817889_45821419_45821488_45836588_45836656_45836740_45836992_45837320_45837418_45837497_45837708_45839328_45839497_45846855_45846938_45848835_45848971_45849579_45849777_45850035_45852897_45860800_45860950_45891779_45891919_45892010_45892097_45893419_45893544_45893629_45893722_45904933
transcript_44455.known	chr12	-	7552	15	FSM	ENSG00000139218.18	ENST00000369367.8	7552	15	0	0	0	0	multi-exon	FALSE	canonical	1	56	junction_2	65.9545297913646	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTTAACATTTTATTAT	-45985347	True	NA	NA	False	AATAAA	-18	NA	45990574	45919130	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_45922195_45922462_45922583_45922935_45923155_45924727_45925075_45926141_45928860_45931505_45931613_45933130_45933233_45934175_45934286_45934446_45934506_45945248_45945314_45948436_45948538_45951649_45951728_45961699_45961858_45964106_45964189_45990352
transcript_4446.known	chr1	+	1072	8	FSM	ENSG00000011009.11	ENST00000374502.7	1072	8	0	0	0	0	multi-exon	FALSE	canonical	3	1879	junction_1	107.578353030786	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGCAAGGCCTGGCCGG	23769838	True	NA	NA	False	NA	NA	NA	23791220	23794870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_23791251_23792656_23792761_23793007_23793040_23793150_23793217_23793704_23793753_23793859_23793931_23794062_23794137_23794223
transcript_44468.nic	chr12	-	3343	11	ISM	ENSG00000139218.18	ENST00000369367.8	7552	15	-115	7585	-105	0	5prime_fragment	FALSE	canonical	3	226	junction_2	29.6877078940089	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAGAAAAGAAAAAAATGA	-45990558	False	NA	NA	False	AATGAA	-4	NA	45990689	45926715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_45928860_45931505_45931613_45933130_45933233_45934175_45934286_45934446_45934506_45945248_45945314_45948436_45948538_45951649_45951728_45961699_45961858_45964106_45964189_45990352
transcript_44469.nic	chr12	-	2716	11	ISM	ENSG00000139218.18	ENST00000369367.8	7552	15	-41	8138	-31	-553	5prime_fragment	FALSE	canonical	3	226	junction_2	29.6877078940089	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCGGCCCCAGTCTCCAT	-45985388	True	NA	NA	False	AAGAAA	-2	NA	45990615	45927268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_45928860_45931505_45931613_45933130_45933233_45934175_45934286_45934446_45934506_45945248_45945314_45948436_45948538_45951649_45951728_45961699_45961858_45964106_45964189_45990352
transcript_44470.nic	chr12	-	2297	11	ISM	ENSG00000139218.18	ENST00000369367.8	7552	15	-45	8561	-35	-976	5prime_fragment	FALSE	canonical	3	226	junction_2	29.6877078940089	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCTTCTGAACACCAAAT	-45990488	False	NA	-23	True	ACTAAA	-4	NA	45990619	45927691	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_45928860_45931505_45931613_45933130_45933233_45934175_45934286_45934446_45934506_45945248_45945314_45948436_45948538_45951649_45951728_45961699_45961858_45964106_45964189_45990352
transcript_44475.nic	chr12	-	663	5	ISM	ENSG00000139218.18	ENST00000369367.8	7552	15	-115	29399	-105	0	5prime_fragment	FALSE	canonical	3	232	junction_1	30.8088867049752	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAACAGCTGAGAGAAA	-45990558	False	NA	NA	False	NA	NA	NA	45990689	45948529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_45948538_45951649_45951728_45961699_45961858_45964106_45964189_45990352
transcript_44479.known	chr12	-	1931	4	FSM	ENSG00000139218.18	ENST00000395454.6	1931	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	140.98778512891	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGGCACGGTGATACATG	-45985357	True	NA	NA	False	AAAAAG	-25	NA	45990584	45954733	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_45956193_45961699_45961858_45964106_45964189_45990352
transcript_44480.known	chr12	-	1336	4	FSM	ENSG00000139218.18	ENST00000395453.2	1336	4	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	112.241802472262	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTGCACATGGTTGCTT	-45985353	True	NA	-8	True	AATAAA	-20	NA	45990580	45960454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_45961323_45961699_45961858_45964106_45964189_45990352
transcript_44481.known	chr12	-	757	3	FSM	ENSG00000139218.18	ENST00000474828.1	757	3	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_1	4	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACTTGACTCTGTGCTTA	-45985349	True	NA	NA	False	NA	NA	NA	45990576	45961406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_45961858_45964106_45964189_45990352
transcript_44488.known	chr12	-	3436	18	FSM	ENSG00000111371.16	ENST00000439706.5	3436	18	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_17	185.474888478347	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	-46261599	True	NA	6	True	NA	NA	NA	46268997	46187800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_46189072_46197719_46197818_46197918_46198061_46198624_46198744_46201097_46201199_46203009_46203090_46204300_46204418_46204531_46204591_46206079_46206163_46207154_46207237_46207528_46207622_46209053_46209128_46229152_46229269_46229563_46229640_46239678_46239894_46243199_46243315_46254813_46254937_46268525
transcript_44494.known	chr12	-	8097	17	FSM	ENSG00000111371.16	ENST00000398637.10	8097	17	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_16	103.632444696388	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAAATGTTGTGTTTGT	-46269026	False	NA	-11	True	ATTAAA	-19	NA	46269043	46183062	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_46189072_46197719_46197818_46197918_46198061_46198624_46198744_46201097_46201199_46203009_46203090_46204300_46204418_46204531_46204591_46206079_46206163_46207154_46207237_46207528_46207622_46209053_46209128_46229152_46229269_46229563_46229640_46239678_46239894_46243199_46243315_46268525
transcript_44499.known	chr12	-	3196	16	FSM	ENSG00000111371.16	ENST00000549049.5	3196	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	151.260687409371	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	-46261597	True	NA	6	True	NA	NA	NA	46268995	46187800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_46189072_46197719_46197818_46197918_46198061_46198624_46198744_46201097_46201199_46203009_46203090_46204300_46204418_46204531_46204591_46206079_46206163_46207154_46207237_46207528_46207622_46209053_46209128_46229152_46229269_46229563_46229640_46239678_46239894_46268525
transcript_44513.known	chr12	-	2332	17	FSM	ENSG00000111371.16	ENST00000546893.5	2332	17	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_16	78.7313469972412	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTTTTTAGAAGAGAAAAGA	-46269102	False	NA	NA	False	NA	NA	NA	46269119	46188564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_46189072_46197719_46197818_46197918_46198061_46198624_46198744_46201097_46201199_46203009_46203090_46204300_46204418_46204531_46204591_46206079_46206163_46207154_46207237_46207528_46207622_46209053_46209128_46229152_46229269_46229563_46229640_46239678_46239894_46243199_46243315_46268864
transcript_44517.known	chr12	-	4795	16	FSM	ENSG00000134294.14	ENST00000256689.10	4795	16	0	0	0	0	multi-exon	TRUE	canonical	3	587	junction_14	74.2872502893703	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCAGTGTTTTTTGTTTT	-46346607	True	NA	-16	True	AATAAA	-18	NA	46372773	46358187	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_46361210_46362283_46362382_46362493_46362639_46363020_46363146_46363725_46363827_46363923_46364004_46364388_46364557_46364643_46364703_46365106_46365190_46366863_46366946_46367075_46367169_46367266_46367341_46370511_46370628_46370775_46370858_46371177_46371380_46372508
transcript_44520.known	chr12	-	4384	15	FSM	ENSG00000134294.14	ENST00000549258.5	4384	15	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_12	197.885866919623	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTTGGTACAAATTCAGA	-46346605	True	NA	-11	True	AATAAA	-22	NA	46372771	46358480	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_46361210_46362283_46362382_46362493_46362639_46363020_46363146_46363725_46363827_46363923_46364004_46364388_46364557_46364643_46364703_46365106_46365190_46366863_46366946_46367075_46367169_46367266_46367341_46370775_46370858_46371177_46371380_46372508
transcript_44532.nnic	chr12	+	572	4	NIC	ENSG00000257261.7	novel	2298	4	NA	NA	0	157374	combination_of_known_splicesites	FALSE	canonical	2	25	junction_3	12.684198393627	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTCTTACTCTTTCAT	46382036	True	NA	7	True	AATAAA	-18	NA	46383665	46652577	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_46383714_46387746_46387973_46470152_46470263_46652389
transcript_44534.known	chr12	+	3271	1	FSM	ENSG00000275481.1	ENST00000621248.1	3271	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTGTTGTTTTGTTCT	46388827	False	NA	NA	False	AATATA	-31	NA	46388855	46392126	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_46388900_46392100
transcript_44535.nnic	chr12	-	3861	16	NIC	ENSG00000139209.16	novel	3791	16	NA	NA	-83	0	combination_of_known_splicesites	FALSE	canonical	3	52	junction_10	6.15142259969188	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATGTGATTTTTGATCT	-46831973	True	NA	-26	True	AATAAA	-18	NA	46832491	46764760	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_46766803_46768309_46768408_46769283_46769429_46775048_46775174_46776903_46777005_46778288_46778369_46778500_46778777_46779610_46779670_46779779_46779863_46779948_46780031_46784541_46784635_46785103_46785178_46787915_46788032_46788527_46788619_46792952_46793184_46832326
transcript_44536.known	chr12	-	3791	16	FSM	ENSG00000139209.16	ENST00000447411.5	3791	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	17.0246879560243	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATGTGATTTTTGATCT	-46825479	False	NA	-26	True	AATAAA	-18	NA	46825997	46764760	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_46766803_46768309_46768408_46769283_46769429_46775048_46775174_46776903_46777005_46778288_46778369_46778500_46778777_46779610_46779670_46779779_46779863_46779948_46780031_46784541_46784635_46785103_46785178_46787915_46788032_46788527_46788619_46792952_46793184_46825902
transcript_44537.known	chr12	+	732	2	FSM	ENSG00000179715.13	ENST00000549630.1	732	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCGAGGAAGTCACCGGGG	47223482	False	NA	NA	False	NA	NA	NA	47223500	47235566	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_47223673_47235006
transcript_44538.known	chr12	-	3058	3	FSM	ENSG00000139211.7	ENST00000429635.1	3058	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	7.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGGACATTTGAATTAAT	-47079736	True	NA	0	True	ATTAAA	-20	NA	47079951	47076599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_47079066_47079146_47079249_47079461
transcript_44541.known	chr12	-	3763	2	FSM	ENSG00000139211.7	ENST00000266581.4	3763	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTTTTCTGTGAACAAAT	-47079833	False	NA	NA	False	NA	NA	NA	47079865	47075706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_47079066_47079461
transcript_44546.known	chr12	-	4339	17	FSM	ENSG00000005175.10	ENST00000005386.8	4339	17	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_6	34.5316317852198	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCGTATACAACCTATTG	-47700747	True	NA	NA	False	AATAAA	-21	NA	47706030	47661248	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_47663591_47666979_47667081_47667753_47667852_47668915_47669103_47670106_47670346_47679492_47679595_47679703_47679775_47681695_47681818_47686779_47686908_47687875_47688002_47689124_47689196_47690517_47690640_47696275_47696404_47697596_47697720_47701463_47701605_47702687_47702847_47705951
transcript_44547.known	chr12	-	2149	16	FSM	ENSG00000005175.10	ENST00000380650.4	2149	16	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	84.4401168481743	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACATTTGTAAGGATCAG	-47700703	True	NA	-21	True	AATAAA	-15	NA	47705986	47663292	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_47663591_47666979_47667081_47667753_47667852_47668915_47669103_47670106_47670346_47679703_47679775_47681695_47681818_47686779_47686908_47687875_47688002_47689124_47689196_47690517_47690640_47696275_47696404_47697596_47697720_47701463_47701605_47702687_47702847_47705951
transcript_44548.nic	chr12	-	1610	13	ISM	ENSG00000005175.10	ENST00000005386.8	4339	17	-30	8889	-30	-6845	5prime_fragment	FALSE	canonical	3	280	junction_2	37.6906265977807	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAGAAGTCAGTGATACT	NA	False	NA	14	True	NA	NA	NA	47706060	47670137	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_47670346_47679492_47679595_47679703_47679775_47681695_47681818_47686779_47686908_47687875_47688002_47689124_47689196_47690517_47690640_47696275_47696404_47697596_47697720_47701463_47701605_47702687_47702847_47705951
transcript_44550.nic	chr12	-	763	6	ISM	ENSG00000005175.10	ENST00000380650.4	2149	16	-74	27244	-30	5405	5prime_fragment	FALSE	canonical	3	328	junction_1	31.1473915440764	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAGAAGAGGCCAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	47706060	47690536	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_47690640_47696275_47696404_47697596_47697720_47701463_47701605_47702687_47702847_47705951
transcript_44554.known	chr12	-	621	3	FSM	ENSG00000005175.10	ENST00000551293.1	621	3	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_1	15.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTATTTATCCAGTGTG	-47700716	True	NA	NA	False	NA	NA	NA	47705999	47701190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_47701605_47702687_47702847_47705951
transcript_44555.known	chr12	-	420	3	FSM	ENSG00000005175.10	ENST00000547706.1	420	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	157.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CTCAAAAAAAAAAAAAAAAA	-47697533	False	NA	NA	False	NA	NA	NA	47702816	47700014	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_47700165_47701463_47701605_47702687
transcript_44558.known	chr12	-	5751	28	FSM	ENSG00000079337.16	ENST00000405493.6	5751	28	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_27	7.01282384041801	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTGTTTTCATCTTCTT	-47758329	False	132	NA	False	NA	NA	NA	47758461	47734671	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_47737686_47738021_47738094_47738192_47738248_47738689_47738755_47739142_47739231_47740140_47740192_47740304_47740396_47740641_47740824_47740914_47741041_47741504_47741603_47743529_47743677_47743986_47744069_47746859_47746900_47747543_47747627_47747711_47747863_47748073_47748153_47748453_47748543_47748818_47748932_47749389_47749537_47749740_47749818_47749929_47749991_47750340_47750426_47751047_47751217_47751398_47751521_47751722_47751830_47751915_47751970_47757865_47758079_47758371
transcript_44559.known	chr12	-	6300	28	FSM	ENSG00000079337.16	ENST00000449771.7	6300	28	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	6.59176024708172	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCACATTCTTTTATTTT	-47758748	False	NA	NA	False	TATAAA	-21	NA	47758880	47734362	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_47737686_47738021_47738094_47738192_47738248_47738689_47738755_47739142_47739231_47740140_47740192_47740304_47740396_47740641_47740824_47740914_47741041_47741504_47741603_47743529_47743677_47743986_47744069_47746859_47746900_47747543_47747627_47747711_47747863_47748073_47748153_47748453_47748543_47748818_47748932_47749389_47749537_47749740_47749818_47749929_47749991_47750340_47750426_47751047_47751217_47751398_47751521_47751722_47751830_47751915_47751970_47757865_47758079_47758550
transcript_44577.known	chr12	-	4213	26	FSM	ENSG00000061273.18	ENST00000080059.12	4213	26	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_25	37.6275218423962	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCTCTGAAAGGGCCCCC	-47817071	True	NA	-9	True	AATAAA	-20	NA	47819903	47782721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_47783887_47784078_47784218_47785386_47785472_47785751_47785886_47786584_47786704_47787711_47787810_47788044_47788165_47789260_47789349_47789522_47789579_47789812_47789921_47791258_47791309_47791585_47791707_47791870_47792005_47793368_47793589_47794759_47794934_47795183_47795381_47795586_47795768_47795905_47796017_47796206_47796299_47797016_47797143_47797383_47797500_47798107_47798220_47798561_47798653_47798784_47798973_47802223_47802275_47819766
transcript_44589.known	chr12	-	3216	25	FSM	ENSG00000061273.18	ENST00000552960.5	3216	25	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_24	36.4084658958447	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGACCCTGAGAGGAGAC	-47817054	True	NA	NA	False	NA	NA	NA	47819886	47783650	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_47783887_47784078_47784218_47785386_47785472_47785751_47785886_47786584_47786704_47787711_47787810_47788044_47788165_47789260_47789349_47789522_47789579_47789812_47789921_47791258_47791309_47791585_47791707_47791870_47792005_47793368_47793589_47794759_47794934_47795183_47795381_47795586_47795768_47795905_47796017_47796206_47796299_47797016_47797143_47797383_47797500_47798107_47798220_47798561_47798653_47798784_47798973_47819766
transcript_44591.known	chr12	-	4065	25	FSM	ENSG00000061273.18	ENST00000354334.7	4065	25	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_17	40.5215777566581	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCTCTGAAAGGGCCCCC	-47817034	True	NA	-9	True	AATAAA	-20	NA	47819866	47782721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_47783887_47784078_47784218_47785386_47785472_47785751_47785886_47786584_47786704_47787711_47787810_47788044_47788165_47789260_47789349_47789522_47789579_47789812_47789921_47791258_47791309_47791585_47791707_47791870_47792005_47793368_47793589_47794759_47794934_47795183_47795381_47795586_47795768_47796206_47796299_47797016_47797143_47797383_47797500_47798107_47798220_47798561_47798653_47798784_47798973_47802223_47802275_47819766
transcript_44605.nic	chr12	-	4128	24	NIC	ENSG00000061273.18	novel	4213	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_17	39.4703114003625	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCTCTGAAAGGGCCCCC	-47819943	False	NA	-9	True	AATAAA	-20	NA	47819980	47782721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_47783887_47784078_47784218_47785386_47785472_47785751_47785886_47786584_47786704_47787711_47787810_47788044_47788165_47789260_47789349_47789522_47789579_47789812_47789921_47791258_47791309_47791585_47791707_47791870_47792005_47793368_47793589_47794759_47794934_47795183_47795381_47795586_47795768_47796206_47796299_47797016_47797143_47797383_47797500_47798107_47798220_47798561_47798653_47798784_47798973_47819766
transcript_44635.known	chr12	-	4092	16	FSM	ENSG00000079337.16	ENST00000395358.7	4092	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_11	5.87499408983154	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCGCATTGTGAATATTTAG	-47758513	False	NA	-2	True	AATAAA	-19	NA	47758645	47744452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_47746900_47747543_47747627_47747711_47747863_47748073_47748153_47748453_47748543_47748818_47748932_47749389_47749537_47749740_47749818_47749929_47749991_47750340_47750426_47751047_47751217_47751398_47751521_47751722_47751830_47751915_47751970_47757865_47758079_47758550
transcript_44661.known	chr12	+	751	5	FSM	ENSG00000211584.14	ENST00000547002.5	751	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	44.2627100390385	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGGGCCTTAGGACCTGG	47758545	False	NA	NA	False	NA	NA	NA	47758577	47780307	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_47758661_47760215_47760402_47772169_47772321_47779027_47779196_47780144
transcript_44663.nic	chr12	+	2401	5	NIC	ENSG00000211584.14	novel	577	4	NA	NA	202	846	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	42.5587828773333	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGGTGGTTGCTTGTG	47758747	False	NA	19	True	AATACA	-17	NA	47758779	47781670	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_47759150_47760215_47760402_47772169_47772321_47779027_47779196_47780144
transcript_44675.known	chr12	+	2978	3	FSM	ENSG00000211584.14	ENST00000442218.3	2978	3	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	10	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTTTTCCATTTTCTTC	47771966	True	NA	3	True	AATAAA	-15	NA	47773237	47782751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_47773441_47779027_47779196_47780144
transcript_44677.known	chr12	-	4616	10	FSM	ENSG00000111424.12	ENST00000549336.6	4616	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	1.4142135623731	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCCTTATCCTTATAAGG	-47904872	True	NA	NA	False	AATAAA	-18	NA	47904994	47841536	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_47845006_47846334_47846452_47846656_47846809_47855629_47855802_47857128_47857250_47857503_47857689_47865046_47865178_47878967_47879116_47882693_47882775_47904954
transcript_44678.known	chr12	+	1414	8	FSM	ENSG00000134291.12	ENST00000449758.6	1414	8	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	118.573321843749	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGAAAAATAAACCCTGCT	47957741	True	NA	-12	True	NA	NA	NA	47963634	47968849	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_47963705_47964208_47964424_47965281_47965346_47965837_47965998_47966088_47966173_47966682_47966733_47967207_47967262_47968132
transcript_44679.known	chr12	+	1539	8	FSM	ENSG00000134291.12	ENST00000429772.7	1539	8	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	104.251657844206	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCTCCTCTGATTGC	47957702	True	NA	17	True	AATAAA	-17	NA	47963595	47968878	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_47963705_47964208_47964424_47965281_47965346_47965837_47965998_47966088_47966230_47966682_47966733_47967207_47967262_47968132
transcript_44688.known	chr12	-	5059	54	FSM	ENSG00000139219.19	ENST00000380518.8	5059	54	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_52	12.758372815359	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTGACTTGTGGTTTGT	-48003268	True	NA	-1	True	ATTAAA	-24	NA	48004476	47972966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_47973554_47974088_47974332_47974674_47974863_47975316_47975606_47975962_47976071_47976513_47976568_47976811_47976920_47977101_47977156_47977319_47977428_47977599_47977654_47978009_47978118_47978290_47978399_47978596_47978759_47979510_47979565_47980008_47980063_47980553_47980662_47980914_47980969_47981342_47981397_47981775_47981830_47982106_47982161_47982501_47982610_47982847_47982947_47983092_47983138_47983384_47983439_47983682_47983737_47984086_47984141_47984545_47984600_47984994_47985094_47985533_47985588_47985727_47985827_47985911_47985966_47986335_47986444_47986834_47986889_47987077_47987177_47987268_47987314_47987610_47987710_47989227_47989282_47989760_47989806_47992877_47992932_47993457_47993503_47993808_47993863_47993993_47994048_47994423_47994478_47995254_47995309_47995709_47995764_47995874_47995920_47996547_47996626_47997605_47997708_47997870_47997925_47998031_47998065_47998168_47998202_47998414_47998432_47999918_48000126_48004236
transcript_44689.known	chr12	-	4442	53	FSM	ENSG00000139219.19	ENST00000337299.7	4442	53	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_52	14.7514290752901	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACCTGAACCCAGAAACAA	-48003298	True	NA	NA	False	NA	NA	NA	48004506	47973406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_47973554_47974088_47974332_47974674_47974863_47975316_47975606_47975962_47976071_47976513_47976568_47976811_47976920_47977101_47977156_47977319_47977428_47977599_47977654_47978009_47978118_47978290_47978399_47978596_47978759_47979510_47979565_47980008_47980063_47980553_47980662_47980914_47980969_47981342_47981397_47981775_47981830_47982106_47982161_47982501_47982610_47982847_47982947_47983092_47983138_47983384_47983439_47983682_47983737_47984086_47984141_47984545_47984600_47984994_47985094_47985533_47985588_47985727_47985827_47985911_47985966_47986335_47986444_47986834_47986889_47987077_47987177_47987268_47987314_47987610_47987710_47989227_47989282_47989760_47989806_47992877_47992932_47993457_47993503_47993808_47993863_47993993_47994048_47994423_47994478_47995254_47995309_47995709_47995764_47995874_47995920_47996547_47996626_47997605_47997708_47997870_47997925_47998031_47998065_47998168_47998202_47998414_47998432_48004236
transcript_44692.known	chr12	-	747	2	FSM	ENSG00000139219.19	ENST00000490609.2	747	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTTGCTTCCAAGACAC	-48003346	True	NA	NA	False	NA	NA	NA	48004554	47999696	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_48000126_48004236
transcript_44694.known	chr12	+	3476	25	FSM	ENSG00000152556.17	ENST00000340802.12	3476	25	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	161.053540959383	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGCATTTCATCATTGAA	48105683	True	NA	21	True	AATAAA	-15	NA	48105922	48146404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_48106138_48107364_48107456_48108071_48108195_48122766_48122860_48130362_48130437_48131315_48131394_48132867_48133058_48133314_48133481_48134231_48134277_48134720_48134830_48134942_48135039_48135290_48135384_48137720_48137847_48139284_48139350_48139848_48139913_48140721_48140872_48141310_48141382_48141739_48141828_48141913_48142067_48142781_48142947_48143752_48143815_48144045_48144158_48145030_48145131_48145209_48145316_48145563
transcript_44704.known	chr12	+	3090	23	FSM	ENSG00000152556.17	ENST00000359794.11	3090	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	112.734017393535	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGCATTTCATCATTGAA	48114607	True	NA	21	True	AATAAA	-15	NA	48119363	48146404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_48119407_48122766_48122860_48130362_48130437_48131315_48131394_48132867_48133058_48133314_48133481_48134231_48134277_48134720_48134830_48134942_48135039_48135290_48135384_48137720_48137847_48139284_48139350_48139848_48139913_48140721_48140872_48141310_48141382_48141739_48141828_48141913_48142067_48142781_48142947_48143752_48143815_48144045_48144158_48145030_48145131_48145209_48145316_48145563
transcript_44708.known	chr12	+	2867	23	FSM	ENSG00000152556.17	ENST00000551339.6	2867	23	0	0	0	0	multi-exon	FALSE	canonical	1	36	junction_1	106.240799309947	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTGGTCACTGTGCTTT	48114570	True	NA	3	True	AATAAA	-3	NA	48119326	48146088	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_48119463_48122766_48122860_48130362_48130437_48131315_48131394_48132867_48133058_48133314_48133481_48134231_48134277_48134720_48134830_48134942_48135039_48135290_48135384_48137720_48137847_48139284_48139350_48139848_48139913_48140721_48140872_48141310_48141382_48141739_48141828_48141913_48142067_48142781_48142947_48143752_48143815_48144045_48144158_48145030_48145131_48145209_48145316_48145563
transcript_44712.nic	chr12	+	2763	22	NIC	ENSG00000152556.17	novel	3063	22	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	146.144711310368	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGCTTCTCCTGTTATC	48114541	True	NA	19	True	AATAAA	-19	NA	48119297	48146104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_48119407_48122766_48122860_48130362_48130437_48131315_48131394_48132867_48133058_48133314_48133481_48134231_48134277_48134720_48134830_48134942_48135039_48137720_48137847_48139284_48139350_48139848_48139913_48140721_48140872_48141310_48141382_48141739_48141828_48141913_48142067_48142781_48142947_48143752_48143815_48144045_48144158_48145030_48145131_48145209_48145316_48145563
transcript_44714.known	chr12	+	3063	22	FSM	ENSG00000152556.17	ENST00000546964.5	3063	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	113.937166914643	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGCTTCTCCTGTTATC	48114586	True	NA	19	True	AATAAA	-19	NA	48119342	48146104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_48119407_48122766_48122860_48130362_48130437_48131315_48131394_48132867_48133058_48133314_48133481_48134231_48134277_48134720_48134830_48134942_48135384_48137720_48137847_48139284_48139350_48139848_48139913_48140721_48140872_48141310_48141382_48141739_48141828_48141913_48142067_48142781_48142947_48143752_48143815_48144045_48144158_48145030_48145131_48145209_48145316_48145563
transcript_44723.known	chr12	-	4679	18	FSM	ENSG00000079387.14	ENST00000448372.5	4679	18	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_17	28.8586820456473	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGGCCCAAAGGCATG	-48105676	False	NA	NA	False	AAAAAG	-12	NA	48105808	48042973	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_48045385_48046355_48046452_48046977_48047063_48048000_48048081_48048928_48049133_48063709_48063842_48065064_48065221_48065595_48065681_48066926_48066966_48071666_48071722_48074323_48074608_48074689_48074794_48083590_48083763_48088800_48088961_48096342_48096428_48097993_48098125_48101468_48101517_48105456
transcript_44734.known	chr12	-	657	5	FSM	ENSG00000177981.11	ENST00000535055.5	657	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	10.256095748383	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTACAACAATGATACACC	-48156824	True	NA	NA	False	NA	NA	NA	48157591	48149791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_48149999_48150086_48150141_48151200_48151306_48153367_48153526_48157458
transcript_44735.known	chr12	-	580	5	FSM	ENSG00000177981.11	ENST00000539464.5	580	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	11.9373363863133	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTATGGTGCAAACCCC	-48156824	True	NA	NA	False	NA	NA	NA	48157591	48149919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_48149999_48151200_48151306_48151564_48151666_48153367_48153530_48157458
transcript_44737.known	chr12	-	2610	4	FSM	ENSG00000177981.11	ENST00000536549.5	2610	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	11.3431330181157	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGCAATTTCTACTTTT	-48156828	False	NA	1	True	AATAAA	-16	NA	48157595	48147788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_48149999_48151200_48151306_48153367_48153526_48157458
transcript_44740.known	chr12	+	2283	1	FSM	ENSG00000177875.5	ENST00000316554.5	2283	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCTGACTGGTACTAAGG	48183592	True	NA	5	True	AATAAA	-19	NA	48183643	48185926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_48183600_48185900
transcript_44741.known	chr12	+	3645	1	FSM	ENSG00000269514.3	ENST00000595310.1	3645	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTATTTATTGAATCCTG	48198256	True	NA	NA	False	AATAAA	-14	NA	48198386	48202031	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_48198400_48202000
transcript_44742.known	chr12	-	4544	7	FSM	ENSG00000167528.13	ENST00000301042.7	4544	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	8.58292879305582	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGGATATCATCTTCAGGA	-48350432	True	NA	NA	False	AATAAA	-37	NA	48350891	48340007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_48343728_48344598_48344713_48345344_48345475_48347251_48347344_48347906_48348116_48350045_48350219_48350785
transcript_44743.known	chr12	-	7227	6	FSM	ENSG00000167528.13	ENST00000547026.6	7227	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	2.03960780543711	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATTTGTTCTCTAGGTCT	-48350460	True	NA	-3	True	AATAAA	-20	NA	48350919	48337179	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_48343728_48344598_48344713_48345344_48345475_48347251_48347344_48347906_48348116_48350785
transcript_44754.nic	chr12	-	2379	12	NIC	ENSG00000139620.13	novel	2373	10	NA	NA	-53	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_3	103.687865990766	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTTGTTTGAGAATATA	-48678613	True	NA	0	True	AAGAAA	-40	NA	48682291	48653401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_48654176_48654940_48655061_48660365_48660620_48661194_48661244_48662559_48662655_48667692_48667790_48669105_48669273_48671798_48671963_48679035_48679151_48679654_48679834_48681381_48681642_48682186
transcript_44764.nic	chr12	-	2264	11	NIC	ENSG00000139620.13	novel	1881	9	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	104.640766434502	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTTGTTTGAGAATATA	-48678613	True	NA	0	True	AAGAAA	-40	NA	48682291	48653401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_48654176_48654940_48655061_48660365_48660620_48661194_48661244_48662559_48662655_48667692_48667790_48669105_48669273_48671798_48671963_48679654_48679834_48681381_48681642_48682186
transcript_44770.nic	chr12	-	2421	11	NIC	ENSG00000139620.13	novel	2373	10	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	95.179251940746	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTTGTTTGAGAATATA	-48678591	True	NA	0	True	AAGAAA	-40	NA	48682269	48653401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_48654176_48654940_48655061_48660365_48660620_48667692_48667790_48669105_48669273_48671798_48671963_48679035_48679151_48679654_48679834_48681381_48681642_48681857_48682066_48682186
transcript_4478.known	chr1	-	1488	12	FSM	ENSG00000117308.15	ENST00000374497.7	1488	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	113.975638980406	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGTTCTCACAGATGGT	-23796713	False	NA	-9	True	AATAAA	-21	NA	23800402	23795599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23796008_23796150_23796266_23796508_23796587_23796696_23796783_23796875_23796943_23797033_23797148_23797694_23797872_23798116_23798231_23798614_23798731_23798886_23799013_23799365_23799437_23800386
transcript_44782.known	chr12	-	2373	10	FSM	ENSG00000139620.13	ENST00000420613.7	2373	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	77.0648276084556	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTCTTCTTTTTACCC	-48678560	True	NA	65	True	ATTAAA	-17	NA	48682238	48653210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_48654176_48654940_48655061_48660365_48660620_48667692_48667790_48669105_48669273_48671798_48671963_48679035_48679151_48679654_48679834_48681381_48681642_48682186
transcript_44784.nic	chr12	-	2306	10	NIC	ENSG00000139620.13	novel	2373	10	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	99.6148137131778	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTTGTTTGAGAATATA	-48678591	True	NA	0	True	AAGAAA	-40	NA	48682269	48653401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_48654176_48654940_48655061_48660365_48660620_48667692_48667790_48669105_48669273_48671798_48671963_48679654_48679834_48681381_48681642_48681857_48682066_48682186
transcript_44785.nic	chr12	-	2133	10	NIC	ENSG00000139620.13	novel	2373	10	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	92.4483172265709	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTTGTTTGAGAATATA	-48678613	True	NA	0	True	AAGAAA	-40	NA	48682291	48653401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_48654176_48654940_48655061_48660467_48660620_48667692_48667790_48669105_48669273_48671798_48671963_48679035_48679151_48679654_48679834_48681381_48681642_48682186
transcript_4479.known	chr1	-	1516	12	FSM	ENSG00000117308.15	ENST00000617979.5	1516	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	86.9120387480287	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGTTCTCACAGATGGTC	-23797065	True	NA	-8	True	AATAAA	-22	NA	23800754	23795598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23796008_23796150_23796266_23796508_23796587_23796696_23796783_23796875_23796943_23797033_23797148_23797694_23797872_23798116_23798231_23798614_23798731_23798886_23799013_23799365_23799437_23800711
transcript_44795.known	chr12	-	6788	9	FSM	ENSG00000129315.11	ENST00000261900.8	6788	9	0	0	0	0	multi-exon	TRUE	canonical	3	5	junction_3	6.05056815514047	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATTGTTGTTTATGTGT	-48713336	True	NA	0	True	AATAAA	-21	NA	48716707	48688457	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_48694437_48695758_48695830_48695998_48696163_48698137_48698184_48699777_48699841_48701012_48701074_48705767_48705897_48714442_48714525_48716514
transcript_44796.known	chr12	-	2017	8	FSM	ENSG00000129315.11	ENST00000417344.2	2017	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7.586238884201	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAAAGAAGAGGAG	-48716664	False	NA	NA	False	NA	NA	NA	48716675	48693032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_48694437_48695758_48695830_48698137_48698184_48699777_48699841_48701012_48701074_48705767_48705897_48714442_48714525_48716514
transcript_44797.known	chr12	+	473	3	FSM	ENSG00000257660.5	ENST00000549864.1	473	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGGTTTTCAGAATCAGAT	48789562	False	NA	NA	False	AATAAA	-23	NA	48789575	48790535	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_48789691_48789984_48790120_48790312
transcript_44798.known	chr12	+	1814	13	FSM	ENSG00000167535.8	ENST00000540990.5	1814	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	10.0692049779955	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGGATCCCCTTAGCAG	48814422	True	NA	NA	False	NA	NA	NA	48814450	48828200	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_48814554_48823343_48823467_48823680_48823804_48824257_48824374_48824668_48824734_48824948_48824969_48825162_48825244_48825433_48825493_48825659_48825770_48826366_48826519_48826758_48826855_48826973_48827124_48827584
transcript_44799.known	chr12	+	1872	13	FSM	ENSG00000167535.8	ENST00000536187.6	1872	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.5422430672456	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCCTTCCCACCAGACTC	48815551	True	NA	NA	False	NA	NA	NA	48815586	48828219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_48815729_48823343_48823467_48823680_48823804_48824257_48824374_48824668_48824734_48824948_48824969_48825162_48825244_48825433_48825493_48825659_48825770_48826366_48826519_48826758_48826855_48826973_48827124_48827584
transcript_44800.known	chr12	+	2931	13	FSM	ENSG00000167535.8	ENST00000301050.7	2931	13	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	6.12372435695795	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGCTTCTGTTCTGTC	48818352	True	NA	5	True	AATAAA	-15	NA	48818495	48828941	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_48818975_48823343_48823467_48823680_48823804_48824257_48824374_48824668_48824734_48824948_48824969_48825162_48825244_48825433_48825493_48825659_48825770_48826366_48826519_48826758_48826855_48826973_48827124_48827584
transcript_44815.known	chr12	-	3256	17	FSM	ENSG00000174243.10	ENST00000308025.8	3256	17	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_11	24.0083806982062	390	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTAGTTCTAGTTAAACT	-48847414	True	NA	-5	True	AATAAA	-23	NA	48852163	48829755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_48830693_48831141_48831317_48832077_48832187_48832421_48832574_48833276_48833520_48834319_48834498_48836120_48836267_48836568_48836795_48836893_48837038_48837280_48837394_48837523_48837658_48837941_48838081_48839843_48839910_48840012_48840107_48843939_48844051_48845573_48845783_48852083
transcript_44824.known	chr12	-	1653	5	FSM	ENSG00000172602.11	ENST00000309739.6	1653	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	5.7662812973354	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTCCGTATTTTTTTC	-48864607	True	NA	-11	True	TATAAA	-4	NA	48865870	48857144	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_48858242_48860996_48861132_48862008_48862119_48864782_48864871_48865647
transcript_44825.known	chr12	-	793	4	FSM	ENSG00000172602.11	ENST00000551243.1	793	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	17.5562587763516	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCAGAAGCAGGCGCCCAT	-48864592	True	NA	NA	False	NA	NA	NA	48865855	48861029	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_48861132_48862008_48862119_48864782_48864871_48865362
transcript_44851.known	chr12	-	939	5	FSM	ENSG00000272822.2	ENST00000398092.4	939	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	422.082041788086	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGCAAAGCCATCGTGGAAAA	-48923580	True	NA	NA	False	NA	NA	NA	48957365	48903502	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_48903909_48939654_48939780_48939996_48940108_48940947_48941189_48957309
transcript_44856.known	chr12	-	4041	5	FSM	ENSG00000134287.10	ENST00000256682.9	4041	5	0	0	0	0	multi-exon	FALSE	canonical	3	867	junction_1	55.312747174589	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCAGTGTAATGACCTTA	-48923702	True	NA	-36	True	AATAAA	-18	NA	48957487	48935722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_48939109_48939654_48939780_48939996_48940108_48940947_48941189_48957309
transcript_44861.known	chr12	-	1089	4	FSM	ENSG00000134287.10	ENST00000447318.6	1089	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	417.172492967704	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTCCTTTGCCACCCTCT	-48923692	True	NA	-57	True	NA	NA	NA	48957477	48938553	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_48939109_48939654_48939780_48940947_48941189_48957309
transcript_44862.known	chr12	-	4957	1	FSM	ENSG00000134285.11	ENST00000553027.1	4957	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTAGGAGTTGAAAGATT	-48926458	False	NA	NA	False	NA	NA	NA	48926474	48921517	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_48921500_48926500
transcript_44863.known	chr12	-	691	6	FSM	ENSG00000134285.11	ENST00000550765.6	691	6	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_5	64.1417180936089	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTGCATTCTTCATCT	-48920966	True	NA	-16	True	AATAAA	-18	NA	48925492	48921962	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_48922202_48923781_48923853_48924222_48924257_48924560_48924649_48925045_48925112_48925299
transcript_44864.known	chr12	-	630	5	FSM	ENSG00000134285.11	ENST00000444214.6	630	5	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_4	206.246212086428	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATTCTTCATCTGATA	-48924957	False	4526	-12	True	AATAAA	-22	NA	48924967	48921958	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_48922202_48923781_48923853_48924222_48924257_48924560_48924649_48924773
transcript_44865.known	chr12	-	517	4	FSM	ENSG00000134285.11	ENST00000551094.5	517	4	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_1	53.7835166818484	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATTCTTCATCTGATA	-48924719	False	NA	-12	True	AATAAA	-22	NA	48924729	48921958	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_48922202_48923781_48923853_48924222_48924257_48924560
transcript_44866.known	chr12	-	1052	6	FSM	ENSG00000134285.11	ENST00000552878.5	1052	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	202.287913628076	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGACTCTATCCGTGTG	-48920985	True	NA	-8	True	TTTAAA	-32	NA	48925511	48922564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_48923146_48923781_48923853_48924222_48924257_48924560_48924649_48925045_48925112_48925299
transcript_44867.known	chr12	-	2661	4	FSM	ENSG00000134285.11	ENST00000551694.5	2661	4	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_3	38.4736562107401	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGCATTCTTCATCTGA	-48920984	True	NA	-14	True	AATAAA	-20	NA	48925510	48921960	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_48924257_48924560_48924649_48925045_48925112_48925299
transcript_44869.known	chr12	-	2246	5	FSM	ENSG00000169884.14	ENST00000301061.9	2246	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.29903810567666	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGGATGCAGATGGTGA	NA	False	NA	-7	True	AATAAA	-14	NA	48971735	48965339	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_48966554_48967945_48968320_48970088_48970352_48970455_48970570_48971454
transcript_4487.nic	chr1	-	1532	11	NIC	ENSG00000117308.15	novel	1516	12	NA	NA	-116	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	91.1469143745415	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGTTCTCACAGATGGT	NA	False	NA	-9	True	AATAAA	-21	NA	23800897	23795599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_23796008_23796150_23796266_23796508_23796587_23796696_23796783_23796875_23796943_23797033_23797148_23797694_23797872_23798116_23798231_23798614_23798731_23799365_23799437_23800711
transcript_44871.known	chr12	-	1657	12	FSM	ENSG00000181929.13	ENST00000548065.7	1657	12	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_11	36.4974809500941	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCAGTGTTTGATTTTT	-49015378	True	NA	-2	True	ATTAAA	-21	NA	49018776	49002273	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49003007_49003143_49003291_49003557_49003596_49003756_49003923_49004506_49004634_49004963_49005019_49005119_49005166_49005305_49005365_49005461_49005544_49005742_49005853_49013061_49013111_49018731
transcript_44872.known	chr12	-	1531	11	FSM	ENSG00000181929.13	ENST00000547306.5	1531	11	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_9	104.723254342099	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGATATTGCAGTGTTTGAT	-49015366	True	NA	-6	True	ATTAAA	-17	NA	49018764	49002277	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49003007_49003143_49003291_49003557_49003596_49003756_49003923_49004506_49004634_49004963_49005019_49005119_49005166_49005305_49005365_49005461_49005544_49013061_49013111_49018731
transcript_44876.known	chr12	+	858	3	FSM	ENSG00000257913.3	ENST00000547395.1	858	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	2	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACTCCTCACCGTCTCCA	48998262	False	NA	NA	False	NA	NA	NA	48998397	49018719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_48998691_49009308_49009390_49018235
transcript_44878.known	chr12	+	1324	2	FSM	ENSG00000257913.3	ENST00000552933.2	1324	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACACTTGTCAGCGATTT	48998231	True	NA	4	True	AATAAA	-13	NA	48998366	49019235	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_48998691_49018235
transcript_44879.known	chr12	-	1173	8	FSM	ENSG00000167550.11	ENST00000301068.11	1173	8	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_6	8.0609919883805	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTTTCGTGTGTGTGT	-49069353	True	NA	-3	True	AATAAA	-23	NA	49069979	49064675	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49065193_49065349_49065432_49066230_49066279_49066475_49066533_49066618_49066702_49066967_49067036_49069034_49069107_49069733
transcript_44880.known	chr12	-	1261	8	FSM	ENSG00000167550.11	ENST00000550797.1	1261	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_7	25.7206341369758	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTGAGAAATCTTTTGT	-49069399	True	NA	-29	True	AATAGA	-36	NA	49070025	49064701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49065193_49065349_49065432_49066230_49066279_49066475_49066533_49066618_49066702_49066967_49067036_49069034_49069175_49069733
transcript_44881.known	chr12	-	1063	7	FSM	ENSG00000167550.11	ENST00000420065.5	1063	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	23.7024377555465	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTTGACTTCTTTTTC	-49069321	True	NA	-13	True	AATAAA	-13	NA	49069947	49064685	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49065193_49065349_49065432_49066230_49066279_49066475_49066533_49066618_49066702_49069034_49069107_49069733
transcript_44887.known	chr12	-	2334	18	FSM	ENSG00000139636.16	ENST00000417750.5	2334	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	34.4533182998171	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCTCTGTGTATATTTG	-49108500	False	2181	-2	True	AATAAA	-36	NA	49110681	49097135	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49097740_49097943_49098106_49100387_49100455_49100555_49100647_49101249_49101324_49101471_49101550_49102119_49102197_49102292_49102377_49102467_49102541_49102886_49102952_49103090_49103160_49103686_49103814_49104447_49104552_49104745_49104886_49105923_49105958_49106544_49106747_49106960_49107046_49110483
transcript_44895.known	chr12	-	2235	17	FSM	ENSG00000139636.16	ENST00000547382.5	2235	17	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_5	21.1917399887315	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCACCTGTCTCTGTGTA	-49108669	True	NA	-8	True	AATAAA	-30	NA	49110850	49097141	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49097740_49097943_49098106_49100387_49100455_49100555_49100647_49101249_49101264_49101471_49101550_49102119_49102197_49102292_49102377_49102467_49102541_49102886_49102952_49103090_49103160_49103686_49103814_49104447_49104552_49104745_49104886_49105923_49105958_49106960_49107046_49110483
transcript_44897.known	chr12	-	2295	17	FSM	ENSG00000139636.16	ENST00000267102.13	2295	17	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_5	12.159744035135	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTGTCTCTGTGTATAT	-49108666	True	NA	-5	True	AATAAA	-33	NA	49110847	49097138	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49097740_49097943_49098106_49100387_49100455_49100555_49100647_49101249_49101324_49101471_49101550_49102119_49102197_49102292_49102377_49102467_49102541_49102886_49102952_49103090_49103160_49103686_49103814_49104447_49104552_49104745_49104886_49105923_49105958_49106960_49107046_49110483
transcript_44917.nic	chr12	-	2448	16	NIC	ENSG00000139636.16	novel	2295	17	NA	NA	-4	0	intron_retention	FALSE	canonical	3	81	junction_5	11.5346820020705	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTGTCTCTGTGTATAT	NA	False	NA	-5	True	AATAAA	-33	NA	49110904	49097138	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_49097740_49097943_49098106_49100387_49100455_49100555_49100647_49101249_49101324_49101471_49101550_49102119_49102377_49102467_49102541_49102886_49102952_49103090_49103160_49103686_49103814_49104447_49104552_49104745_49104886_49105923_49105958_49106960_49107046_49110483
transcript_44938.known	chr12	-	2800	15	FSM	ENSG00000139636.16	ENST00000550867.5	2800	15	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	12.7639479530018	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTTGTTTTTTTAAAG	-49108486	False	NA	-24	True	AATAAA	-14	NA	49110667	49097157	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49097740_49097943_49098106_49100387_49101324_49101471_49101550_49102119_49102197_49102292_49102377_49102467_49102541_49102886_49102952_49103090_49103160_49103686_49103814_49104447_49104552_49104745_49104886_49105923_49105958_49106960_49107046_49110483
transcript_4494.known	chr1	-	1563	11	FSM	ENSG00000117308.15	ENST00000459934.5	1563	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	91.0881441242492	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGCTCTGAAAGAGCTT	-23797064	True	NA	-70	True	NA	NA	NA	23800753	23795660	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23796008_23796150_23796266_23796508_23796783_23796875_23796943_23797033_23797148_23797694_23797872_23798116_23798231_23798614_23798731_23798886_23799013_23799365_23799437_23800711
transcript_44959.known	chr12	-	835	5	FSM	ENSG00000123416.15	ENST00000550367.1	835	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4200.62146443833	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGCAGAGATCACCAATG	-48914974	True	NA	NA	False	NA	NA	NA	49131395	49128453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49128786_49128905_49128939_49129241_49129391_49129499_49129723_49131297
transcript_44964.known	chr12	+	2823	4	FSM	ENSG00000167553.17	ENST00000301072.11	2823	4	0	0	0	0	multi-exon	FALSE	canonical	3	734	junction_2	115.276479243021	1753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGGCTTGGAATCCTGAT	49223101	True	NA	7	True	AATAAA	-16	NA	49265081	49274600	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_49265185_49269464_49269688_49269827_49269977_49272252
transcript_44971.known	chr12	-	1627	4	FSM	ENSG00000123416.15	ENST00000336023.9	1627	4	0	0	0	0	multi-exon	FALSE	canonical	3	8627	junction_1	801.186342591757	20023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTGTTTCCTGCGTTTTT	-48914974	True	NA	-8	True	AGTAAA	-17	NA	49131395	49127781	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49128939_49129241_49129391_49129499_49129723_49131297
transcript_44976.known	chr12	-	1887	4	FSM	ENSG00000167552.15	ENST00000295766.9	1887	4	0	0	0	0	multi-exon	FALSE	canonical	3	610	junction_3	913.41350013136	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTGAAAAGTTGTGGT	-49188865	False	NA	NA	False	NA	NA	NA	49188899	49184958	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49185991_49186309_49186459_49186610_49186834_49188416
transcript_44977.known	chr12	-	1782	4	FSM	ENSG00000167552.15	ENST00000552924.2	1782	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	1191.65048940068	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTGAAGTTTTTCATGT	-49164134	True	NA	NA	False	AATGAA	-25	NA	49189078	49184770	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49185991_49186309_49186459_49186610_49186834_49188888
transcript_44978.known	chr12	-	1672	4	FSM	ENSG00000167552.15	ENST00000301071.12	1672	4	0	0	0	0	multi-exon	FALSE	canonical	3	2167	junction_1	403.893000131911	4063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTCCTGTGTTTTCTAT	-49164136	True	NA	NA	False	AATAAA	-22	NA	49189080	49184794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49185991_49186309_49186459_49186610_49186834_49188976
transcript_44979.known	chr12	+	696	3	FSM	ENSG00000167553.17	ENST00000549183.1	696	3	0	0	0	0	multi-exon	FALSE	canonical	3	734	junction_2	121	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACACCCCTTTTGAGGT	49223100	True	NA	NA	False	NA	NA	NA	49265080	49270196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_49265185_49269464_49269688_49269827
transcript_44984.known	chr12	-	984	3	FSM	ENSG00000167552.15	ENST00000546918.1	984	3	0	0	0	0	multi-exon	FALSE	canonical	3	2167	junction_1	489.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTGACCTGACAGAATTC	-49164122	True	NA	NA	False	NA	NA	NA	49189066	49185620	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49185991_49186309_49186834_49188976
transcript_44985.known	chr12	+	675	2	FSM	ENSG00000258017.3	ENST00000656133.1	675	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTAGGCTGCGCTTTGT	49130735	True	NA	NA	False	NA	NA	NA	49130908	49188484	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_49131382_49188282
transcript_44986.known	chr12	-	1453	2	FSM	ENSG00000258101.2	ENST00000549023.2	1453	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGACAGAGTGTTTGGGA	-49264687	True	NA	NA	False	AATAAA	-31	NA	49264756	49232789	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49234139_49264652
transcript_44987.known	chr12	-	1802	4	FSM	ENSG00000167552.15	ENST00000679733.1	1802	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1314.51917698703	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTATTTAAAGTATCTTA	-49164134	True	NA	NA	False	AATAAA	-45	NA	49189078	49184685	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49185991_49186309_49186459_49186587_49186834_49188976
transcript_44988.known	chr12	-	3198	3	FSM	ENSG00000123416.15	ENST00000332858.10	3198	3	0	0	0	0	multi-exon	FALSE	canonical	3	8627	junction_1	432	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCTTTGTTTCCTGCGT	-48914974	True	NA	-12	True	AGTAAA	-13	NA	49131395	49127785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49128939_49129241_49129391_49129499
transcript_44989.known	chr12	+	1800	9	FSM	ENSG00000135406.14	ENST00000257860.9	1800	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.661437827766148	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCAGTGCATTTGTTTC	49295087	True	NA	7	True	AATAAA	-18	NA	49295146	49298686	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_49295746_49296177_49296239_49296431_49296528_49296888_49297057_49297147_49297274_49297356_49297578_49297676_49297727_49297957_49298038_49298287
transcript_44990.known	chr12	+	2551	15	FSM	ENSG00000135451.13	ENST00000257909.8	2551	15	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_11	85.4582186969582	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACGTGTCTAGCTAAGTG	49317693	True	NA	13	True	AATAAA	-13	NA	49323254	49331731	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_49323350_49323603_49323753_49323844_49324038_49325500_49325659_49325746_49325885_49326075_49326159_49326667_49326721_49327208_49327331_49328926_49329056_49329160_49329245_49329394_49329455_49329856_49329992_49330144_49330944_49331213_49331408_49331572
transcript_44991.known	chr12	+	623	4	FSM	ENSG00000135451.13	ENST00000548311.5	623	4	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_3	145.222434752884	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCTCTGTGTTCTCCTA	49317693	True	NA	51	True	AATAAA	-45	NA	49323254	49324416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_49323350_49323603_49323753_49323844_49324038_49324230
transcript_44992.known	chr12	+	778	3	FSM	ENSG00000135451.13	ENST00000550709.5	778	3	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_2	30.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGAAGCCTTTTCCAGT	49317695	True	NA	15	True	AATAAA	-28	NA	49323256	49324380	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_49323350_49323603_49323753_49323844
transcript_44993.known	chr12	+	675	4	FSM	ENSG00000135451.13	ENST00000380327.9	675	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	173.155678188412	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGTTCCCCATGTCAC	49317693	True	NA	27	True	AATAAA	-40	NA	49323254	49324392	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_49323350_49323603_49323753_49323844_49324038_49324154
transcript_44994.known	chr12	+	2771	14	FSM	ENSG00000135451.13	ENST00000551245.5	2771	14	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_11	87.0149956470471	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGTCTGCCCATGGGACT	49317682	True	NA	-48	True	NA	NA	NA	49323243	49331670	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_49323350_49323603_49323753_49323844_49324038_49325500_49325659_49325746_49325885_49326075_49326159_49326667_49326721_49327208_49327331_49328926_49329056_49329160_49329245_49329394_49329455_49329856_49329992_49330144_49331408_49331572
transcript_44995.known	chr12	-	2073	2	FSM	ENSG00000186897.5	ENST00000334221.5	2073	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGTGGCTGCTTAACT	-49337136	True	NA	NA	False	AATAAA	-15	NA	49337188	49332408	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49333234_49335940
transcript_45.known	ERCC-00116	+	1977	1	FSM	ERCC-00116A	DQ668367	1977	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	216	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1977	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00116_+_0_2000
transcript_450.known	chr1	+	2805	1	FSM	ENSG00000176022.7	ENST00000379198.5	2805	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCCCCAGGCTGACCCT	1231003	True	NA	10	True	ATTAAA	-18	NA	1232236	1235041	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1232200_1235000
transcript_45006.known	chr12	+	3240	14	FSM	ENSG00000123352.18	ENST00000552918.6	3240	14	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	44.7993554476034	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTTTCATAGCAGCAA	49363621	True	NA	17	True	AATAAA	-27	NA	49367461	49527425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_49367588_49371227_49371291_49460769_49461038_49484589_49484670_49489464_49489574_49490681_49490732_49494740_49495003_49496832_49497010_49500069_49500206_49514554_49514614_49519072_49519183_49522750_49522854_49524681_49524897_49525943
transcript_45014.known	chr12	+	3158	13	FSM	ENSG00000123352.18	ENST00000321898.10	3158	13	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	27.7503753728366	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCACTTTTGTTTCATAG	49363634	True	NA	11	True	AATAAA	-21	NA	49367474	49527419	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_49367588_49460769_49461038_49484589_49484670_49489464_49489574_49490681_49490732_49494740_49495003_49496832_49497010_49500069_49500206_49514554_49514614_49519072_49519183_49522750_49522854_49524681_49524897_49525943
transcript_45027.known	chr12	+	2781	15	FSM	ENSG00000123352.18	ENST00000549412.5	2781	15	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	69.9336420166595	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTGCCATTCTAAGTA	49366756	True	NA	10	True	AAAAAG	-18	NA	49366904	49526365	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_49367588_49371227_49371291_49460769_49461038_49484589_49484670_49489464_49489574_49490681_49490732_49494740_49495003_49496832_49497010_49500069_49500206_49512861_49512906_49514554_49514614_49519072_49519183_49522750_49522854_49524681_49524897_49525943
transcript_45030.known	chr12	+	1061	5	FSM	ENSG00000123352.18	ENST00000549375.5	1061	5	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	35.4356811702555	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTCGACCTTGAAACATA	49363621	True	NA	NA	False	NA	NA	NA	49367461	49491159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_49367588_49460769_49461038_49484589_49484670_49489464_49489574_49490681
transcript_45042.known	chr12	-	1936	16	FSM	ENSG00000187778.14	ENST00000550165.5	1936	16	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_15	223.112487822224	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCTCAGACTCTTCTTT	-49561984	True	NA	-25	True	AAAACA	-45	NA	49568101	49558362	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49558730_49558842_49558971_49559213_49559302_49559452_49559536_49559728_49559822_49559938_49559968_49560294_49560371_49563000_49563140_49563437_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49566076_49566216_49566721_49566842_49567646_49567750_49568047
transcript_45048.nic	chr12	-	2300	15	ISM	ENSG00000187778.14	ENST00000550165.5	1936	16	-5	-61	-5	0	intron_retention	FALSE	canonical	3	70	junction_14	168.765142933568	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTTATTTTATTTTTTT	-49561989	True	NA	-9	True	AATAAA	-18	NA	49568106	49558301	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_49558730_49558842_49558971_49559213_49559302_49559452_49559536_49559728_49559822_49559938_49559968_49560294_49560371_49563000_49563140_49563437_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49566076_49566216_49566721_49566842_49567646
transcript_45051.known	chr12	-	1938	15	FSM	ENSG00000187778.14	ENST00000343810.9	1938	15	0	0	0	0	multi-exon	FALSE	canonical	3	574	junction_5	59.1494561535887	1453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTTTATTTTTTTTTT	-49562025	True	NA	-6	True	AATAAA	-21	NA	49568142	49558298	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49558730_49558842_49558971_49559213_49559302_49559452_49559536_49559728_49559822_49559938_49559968_49560294_49560371_49563000_49563140_49563437_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49566076_49566216_49566721_49566842_49568047
transcript_45081.known	chr12	-	1666	13	FSM	ENSG00000187778.14	ENST00000548602.5	1666	13	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_12	197.128183762072	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTATTTTATTTTTTTT	-49562014	True	NA	-8	True	AATAAA	-19	NA	49568131	49558300	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49558730_49558842_49558971_49559213_49559302_49559452_49559536_49559728_49559822_49559938_49559968_49560294_49560371_49563000_49563140_49563437_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49568047
transcript_451.known	chr1	-	1036	8	FSM	ENSG00000184163.3	ENST00000330388.2	1036	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	3.49927106111883	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACTGCCTTCGAGTGCTG	-1246707	False	NA	-6	True	AATAAA	-16	NA	1246722	1242452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1242647_1242834_1242914_1243061_1243153_1243443_1243553_1243953_1244106_1244190_1244276_1244380_1244498_1246513
transcript_45103.known	chr12	-	1037	10	FSM	ENSG00000187778.14	ENST00000553173.5	1037	10	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_9	206.087959166906	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCACAGGTGAGGAGGCC	-49561983	True	NA	NA	False	NA	NA	NA	49568100	49559737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49559822_49559938_49559968_49560294_49560371_49563000_49563140_49563437_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49566076_49566216_49568047
transcript_45113.known	chr12	-	2450	14	FSM	ENSG00000187778.14	ENST00000551625.5	2450	14	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_13	175.119063469779	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTTATTTTATTTTTTT	-49561633	False	NA	-9	True	AATAAA	-18	NA	49567750	49558301	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49558730_49558842_49558971_49559213_49559302_49559452_49559536_49559728_49559822_49559938_49559968_49560294_49560371_49563000_49563140_49563437_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49566076_49566842_49567646
transcript_45116.known	chr12	+	3182	26	FSM	ENSG00000110844.14	ENST00000548825.7	3182	26	0	0	0	0	multi-exon	TRUE	canonical	3	54	junction_2	31.9087699543558	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGACTCTTTTCCATG	49623230	True	NA	13	True	TTTAAA	-20	NA	49623560	49644665	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_49623594_49630544_49630626_49631400_49631545_49631859_49631926_49632595_49632624_49632854_49632881_49633013_49633125_49633426_49633548_49633636_49633662_49633885_49634093_49634331_49634456_49634537_49634603_49635098_49635264_49635364_49635474_49635842_49635994_49636715_49636850_49637469_49637585_49637732_49637825_49641907_49642025_49642234_49642373_49642579_49642676_49642929_49643017_49643222_49643398_49643690_49643753_49643860_49644005_49644099
transcript_45199.known	chr12	+	2771	11	FSM	ENSG00000139644.13	ENST00000549385.5	2771	11	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	1216.56955822509	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAAAACACCTA	49706666	True	NA	64	True	ATTAAA	-14	NA	49741573	49764726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_49741612_49741956_49742116_49752463_49752550_49752972_49753082_49755634_49755756_49758226_49758276_49758382_49758481_49758682_49758763_49759220_49759322_49761703_49761780_49762872
transcript_45202.known	chr12	+	2964	11	FSM	ENSG00000139644.13	ENST00000552699.5	2964	11	0	0	0	0	multi-exon	TRUE	canonical	2	18	junction_1	1232.07462842151	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACACCTACTTTTAAAGAA	49706649	True	NA	75	True	ATTAAA	-25	NA	49741556	49764737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_49741612_49741956_49742281_49752463_49752550_49752972_49753082_49755634_49755756_49758226_49758276_49758382_49758481_49758682_49758763_49759220_49759322_49761703_49761780_49762872
transcript_45221.known	chr12	+	2837	10	FSM	ENSG00000139644.13	ENST00000267115.10	2837	10	0	0	0	0	multi-exon	FALSE	canonical	3	2671	junction_1	220.325012450042	4123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGTTTGTGTTAAATT	49706649	True	NA	19	True	AATAAA	-19	NA	49741556	49764934	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_49741612_49752463_49752550_49752972_49753082_49755634_49755756_49758226_49758276_49758382_49758481_49758682_49758763_49759220_49759322_49761703_49761780_49762872
transcript_45249.known	chr12	+	3154	25	FSM	ENSG00000110844.14	ENST00000380281.5	3154	25	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_20	33.9005643594452	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGACTCTTTTCCATGT	49630523	False	NA	14	True	TTTAAA	-21	NA	49630543	49644666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_49630626_49631400_49631545_49631859_49631926_49632595_49632624_49632854_49632881_49633013_49633125_49633426_49633548_49633636_49633662_49633885_49634093_49634331_49634456_49634537_49634603_49635098_49635264_49635364_49635474_49635842_49635994_49636715_49636850_49637469_49637585_49637732_49637825_49641907_49642025_49642234_49642373_49642579_49642676_49642926_49643017_49643222_49643398_49643690_49643753_49643860_49644005_49644099
transcript_45254.known	chr12	-	4882	13	FSM	ENSG00000167566.17	ENST00000335999.7	4882	13	0	0	0	0	multi-exon	TRUE	canonical	3	85	junction_1	10.9873664825663	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGCCCCTGAGTCGGCT	-49825730	True	NA	-13	True	AATAAA	-15	NA	49828413	49791151	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49792052_49792445_49792589_49792677_49792987_49793351_49793434_49793733_49793897_49794764_49797395_49798349_49798464_49801847_49801968_49802957_49802997_49803096_49803166_49803921_49804081_49805979_49806042_49828321
transcript_45260.known	chr12	-	3226	2	FSM	ENSG00000186666.6	ENST00000333924.6	3226	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGGTTTGTGGTGATTTC	-49842697	True	NA	-4	True	AATAAA	-17	NA	49843106	49836042	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49839016_49842853
transcript_45263.known	chr12	+	331	1	FSM	ENSG00000242041.1	ENST00000459730.1	331	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAACTAATGAAAAGTCAAC	NA	False	NA	NA	False	NA	NA	NA	49863172	49863503	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_49863200_49863500
transcript_45264.known	chr12	+	1449	4	FSM	ENSG00000161798.7	ENST00000293599.7	1449	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	0.942809041582063	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCACCTCTGTCTCTCCT	49961859	True	NA	14	True	AATAAA	-15	NA	49961871	49965682	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_49962381_49963491_49963657_49964091_49964176_49964991
transcript_45274.known	chr12	-	3080	17	FSM	ENSG00000161800.13	ENST00000454520.6	3080	17	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_16	55.4199873691794	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGAGGCTGGTTTTCTT	-50017553	True	NA	NA	False	AGTAAA	-17	NA	50025400	49989163	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49990344_49990683_49990793_49991997_49992134_49992244_49992378_49992549_49992656_49994130_49994330_49994413_49994510_49997039_49997205_49999140_49999272_49999615_49999734_50001171_50001253_50002246_50002301_50004234_50004305_50005255_50005393_50006433_50006637_50016630_50016720_50025327
transcript_45275.nnic	chr12	-	3098	17	NIC	ENSG00000161800.13	novel	3080	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_16	66.9302050179887	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGAGGCTGGTTTTCTT	-50017616	True	NA	NA	False	AGTAAA	-17	NA	50025463	49989163	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_49990344_49990683_49990793_49991997_49992134_49992244_49992378_49992549_49992656_49994130_49994330_49994413_49994510_49997039_49997205_49999140_49999272_49999615_49999734_50001171_50001253_50002246_50002301_50004234_50004305_50005255_50005393_50006433_50006637_50016630_50016720_50025372
transcript_45276.known	chr12	-	3106	17	FSM	ENSG00000161800.13	ENST00000312377.10	3106	17	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_16	39.8245664602893	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGGCTGGTTTTCTTGT	-50017647	True	NA	NA	False	AGTAAA	-19	NA	50025494	49989161	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_49990344_49990683_49990793_49991997_49992134_49992244_49992378_49992549_49992656_49994130_49994330_49994413_49994510_49997039_49997205_49999140_49999272_49999615_49999734_50001171_50001253_50002246_50002301_50004234_50004305_50005255_50005393_50006433_50006637_50016630_50016720_50025397
transcript_45288.nic	chr12	-	2870	16	NIC	ENSG00000161800.13	novel	3106	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_14	75.8173243175111	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGAGGCTGGTTTTCTT	-50017616	True	NA	NA	False	AGTAAA	-17	NA	50025463	49989163	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_49990344_49990683_49990793_49991997_49992134_49992244_49992378_49992549_49992656_49994130_49994330_49994413_49994510_49997039_49997205_49999140_49999272_49999615_49999734_50001171_50001253_50002246_50002301_50004234_50004305_50005255_50005393_50016630_50016720_50025397
transcript_45303.known	chr12	+	3886	12	FSM	ENSG00000110881.12	ENST00000447966.7	3886	12	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_3	3.25500250726694	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTCTTCAGTGTTGTTC	50057416	True	NA	15	True	AATAAA	-15	NA	50057595	50083611	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_50057917_50058750_50059129_50059758_50059955_50077212_50077364_50077999_50078128_50078420_50078578_50078923_50078981_50079901_50080056_50080497_50080590_50081101_50081182_50081259_50081365_50081544
transcript_45308.known	chr12	+	3283	13	FSM	ENSG00000066117.15	ENST00000394963.9	3283	13	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_4	41.9367082637634	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACGCTTGTAGTGTTTGT	50064656	True	NA	21	True	NA	NA	NA	50085341	50100707	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_50085547_50086160_50086349_50086620_50086664_50086755_50086879_50087362_50087486_50088520_50088638_50089883_50089986_50090240_50090403_50090492_50090591_50094436_50094573_50096849_50096973_50098713_50098816_50098946
transcript_45314.known	chr12	+	3237	12	FSM	ENSG00000066117.15	ENST00000381513.8	3237	12	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_10	114.054286045239	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGGTCCTCCTACCTAC	50064514	True	NA	13	True	AATAAA	-14	NA	50085199	50100642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_50085547_50086160_50086349_50086620_50086664_50086755_50086879_50087362_50087486_50088520_50088638_50089883_50089986_50090240_50090403_50090492_50090591_50094436_50094573_50098713_50098816_50098946
transcript_45319.nic	chr12	+	3270	12	NIC	ENSG00000066117.15	novel	3283	13	NA	NA	-33	0	intron_retention	FALSE	canonical	3	45	junction_4	118.111517552322	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGGTCCTCCTACCTAC	NA	False	NA	13	True	AATAAA	-14	NA	50085166	50100642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_50085547_50086160_50086349_50086620_50086664_50086755_50086879_50088520_50088638_50089883_50089986_50090240_50090403_50090492_50090591_50094436_50094573_50096849_50096973_50098713_50098816_50098946
transcript_45320.nic	chr12	+	3335	12	NIC	ENSG00000066117.15	novel	3283	13	NA	NA	-33	0	intron_retention	FALSE	canonical	3	45	junction_4	118.111517552322	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACGCTTGTAGTGTTTGT	NA	False	NA	21	True	NA	NA	NA	50085166	50100707	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_50085547_50086160_50086349_50086620_50086664_50086755_50086879_50088520_50088638_50089883_50089986_50090240_50090403_50090492_50090591_50094436_50094573_50096849_50096973_50098713_50098816_50098946
transcript_45328.nic	chr12	+	3084	11	NIC	ENSG00000066117.15	novel	3283	13	NA	NA	36	0	intron_retention	FALSE	canonical	3	23	junction_4	130.10549565641	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGGTCCTCCTACCTAC	50064550	True	NA	13	True	AATAAA	-14	NA	50085235	50100642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_50085547_50086160_50086349_50086620_50086664_50086755_50086879_50089883_50089986_50090240_50090403_50090492_50090591_50094436_50094573_50096849_50096973_50098713_50098816_50098946
transcript_45334.nic	chr12	+	568	2	ISM	ENSG00000066117.15	ENST00000547637.1	587	4	-186	569	-33	-524	5prime_fragment	FALSE	canonical	3	496	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGATGATCCTGGGGCAG	NA	False	NA	20	True	NA	NA	NA	50085166	50086348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_50085547_50086160
transcript_45335.known	chr12	+	587	4	FSM	ENSG00000066117.15	ENST00000547637.1	587	4	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_3	32.6019767635168	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCCAGGAACCTTCAGCAG	50064667	True	NA	NA	False	NA	NA	NA	50085352	50086917	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_50085547_50086160_50086349_50086620_50086664_50086755
transcript_45344.nnic	chr12	-	2179	11	NNC	ENSG00000139624.14	novel	2132	11	NA	NA	-22	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	189.313602258264	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTACTGTCTCAACCTC	-50162104	True	NA	-6	True	ATTAAA	-14	NA	50167415	50129798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_50130695_50133932_50134069_50134545_50134703_50135731_50135839_50135940_50136070_50137727_50137821_50138566_50138618_50142052_50142111_50143073_50143205_50143951_50144058_50167100
transcript_45347.known	chr12	-	2132	11	FSM	ENSG00000139624.14	ENST00000547787.5	2132	11	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_10	173.862589420496	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTACTGTCTCAACCTC	-50161992	True	NA	-6	True	ATTAAA	-14	NA	50167303	50129798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_50130695_50134545_50134703_50135731_50135839_50135940_50136070_50137727_50137821_50138566_50138618_50142052_50142111_50143073_50143205_50143951_50144058_50144768_50144970_50167100
transcript_45355.known	chr12	-	2507	10	FSM	ENSG00000139624.14	ENST00000317551.12	2507	10	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_9	58.2103465411815	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATGACTCATTACATGCT	-50162058	True	NA	NA	False	AATAAA	-13	NA	50167369	50129288	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_50130695_50134545_50134703_50135731_50135839_50135940_50136070_50137727_50137821_50138566_50138618_50142052_50142111_50143073_50143205_50143951_50144058_50167100
transcript_4536.known	chr1	-	2151	10	FSM	ENSG00000117305.15	ENST00000374487.6	2151	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	116.054584858448	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCCAGCATTCGGTTGTG	-23838565	True	NA	-10	True	ATTAAA	-19	NA	23838620	23801886	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23802565_23804399_23804526_23808134_23808324_23810735_23810800_23814189_23814339_23816674_23816771_23817475_23817584_23820509_23820594_23826083_23826184_23838063
transcript_45367.known	chr12	+	484	2	FSM	ENSG00000178449.9	ENST00000550487.6	484	2	0	0	0	0	multi-exon	FALSE	canonical	3	565	junction_1	0	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTTGGTGTTTTTTGT	50107251	True	NA	15	True	ATTAAA	-15	NA	50112235	50120453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_50112302_50120035
transcript_45368.known	chr12	+	677	2	FSM	ENSG00000178449.9	ENST00000548985.1	677	2	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTCTTGGTGTTTTTT	50107252	True	NA	13	True	ATTAAA	-13	NA	50112236	50120451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_50112498_50120035
transcript_45370.known	chr12	-	3669	11	FSM	ENSG00000050405.14	ENST00000394943.7	3669	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	68.5026276868267	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCAATGTTTCTCTTCC	-50282728	True	NA	-6	True	AATAAA	-21	NA	50283506	50175787	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_50178070_50181903_50182038_50192451_50192565_50195829_50195888_50200776_50200885_50204551_50204701_50205983_50206069_50222020_50222486_50231664_50231711_50248632_50248775_50283419
transcript_45372.known	chr12	-	2162	8	FSM	ENSG00000050405.14	ENST00000552909.5	2162	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	61.1682190390415	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTAAATACTAGAGATAAC	-50218838	False	NA	NA	False	AAAACA	-25	NA	50222356	50176884	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_50178070_50181903_50182035_50192451_50192562_50195829_50195888_50200776_50200885_50204551_50204701_50205983_50206069_50222020
transcript_45374.known	chr12	-	3706	11	FSM	ENSG00000050405.14	ENST00000341247.9	3680	11	-26	0	-26	0	multi-exon	FALSE	canonical	3	36	junction_10	60.5636854889132	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCAATGTTTCTCTTCC	-50282768	True	NA	-6	True	AATAAA	-21	NA	50283546	50175787	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_50178070_50181903_50182038_50192451_50192562_50195829_50195888_50200776_50200885_50204551_50204701_50205983_50206069_50222020_50222486_50231664_50231711_50248632_50248775_50283419
transcript_45375.nic	chr12	+	2412	17	NIC	ENSG00000161813.23	novel	6441	16	NA	NA	-22	-580	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	88.9739252534134	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATTCAAAAACTTCACTCT	NA	False	NA	NA	False	AGTAAA	-12	NA	50400834	50475876	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_50401029_50412404_50412454_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50461134_50461348_50462581_50462631_50466958_50467121_50473414_50473537_50473998_50474168_50475525
transcript_45386.known	chr12	+	2853	16	FSM	ENSG00000161813.23	ENST00000518444.5	2853	16	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	74.6599401732058	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGAGTAGATTTTTTTT	50390457	True	NA	22	True	AGTAAA	-22	NA	50400928	50476463	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_50401029_50427764_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50461134_50461348_50462581_50462631_50466958_50467121_50473414_50473537_50473998_50474168_50475525
transcript_45401.known	chr12	+	6296	15	FSM	ENSG00000161813.23	ENST00000293618.12	6296	15	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_10	85.0247562988185	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCAGGACTGGTTTCC	NA	False	NA	4	True	AATAAA	-7	NA	50400808	50479996	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_50401029_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50462581_50462631_50466958_50467121_50473414_50473537_50473998_50474168_50475525
transcript_45403.known	chr12	+	3621	15	FSM	ENSG00000161813.23	ENST00000347328.9	3621	15	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_8	77.2069839285731	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAATGTAAATGGTGGTT	50390513	False	NA	NA	False	AGTAAA	-20	NA	50400984	50477497	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_50401029_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50454313_50454418_50461134_50461348_50462581_50462631_50466958_50467121_50473414_50473537_50473998_50474168_50475525
transcript_45418.nnic	chr12	+	1899	11	NNC	ENSG00000161813.23	novel	1577	11	NA	NA	-15	1153	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_10	99.6094373039021	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTTGCTTGACTCTGAAA	50390370	True	NA	6	True	AATAAA	-14	NA	50400841	50456115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_50401029_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50455506
transcript_4542.known	chr1	-	1570	9	FSM	ENSG00000117305.15	ENST00000374490.8	1570	9	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_3	31.9491783931919	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGCATTCGGTTGTGCA	-23824022	True	NA	-8	True	ATTAAA	-21	NA	23825429	23801884	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23802565_23804399_23804526_23808134_23808324_23810735_23810800_23814189_23814339_23816674_23816771_23817475_23817584_23820509_23820594_23825355
transcript_45420.known	chr12	+	1577	11	FSM	ENSG00000161813.23	ENST00000522085.5	1577	11	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	54.0281408156897	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGTTGGTTGCTTTTTA	50390436	True	NA	NA	False	AATAAA	-17	NA	50400907	50461487	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_50401029_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50461134
transcript_4543.known	chr1	-	1354	7	FSM	ENSG00000117305.15	ENST00000436439.6	1354	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	93.7504074065222	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCCAGCATTCGGTTGTG	-23824021	True	NA	-10	True	ATTAAA	-19	NA	23825428	23801886	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23802565_23804399_23804526_23808134_23808324_23816674_23816771_23817475_23817584_23820509_23820594_23825355
transcript_45433.nic	chr12	+	735	6	ISM	ENSG00000161813.23	ENST00000518561.5	1578	12	-121	25888	-22	0	5prime_fragment	FALSE	canonical	3	48	junction_1	132.50298109854	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTAATTCTTGAAGTGTT	NA	False	NA	37	True	AATAAA	-20	NA	50400834	50435599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_50401029_50412404_50412454_50427761_50427910_50428934_50429091_50430494_50430571_50435487
transcript_45434.known	chr12	+	790	7	FSM	ENSG00000161813.23	ENST00000548993.5	790	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	152.100478485623	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGCGTTGTATTGTAATT	50390424	True	NA	NA	False	NA	NA	NA	50400895	50437785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_50401029_50416345_50416435_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734
transcript_45438.nnic	chr12	+	576	5	NNC	ENSG00000161813.23	novel	567	4	NA	NA	203	0	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_1	123.391652878142	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTAATTCTTGAAGTGTT	50401374	False	NA	37	True	AATAAA	-20	NA	50401395	50435599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_50401480_50427761_50427910_50428934_50429091_50430494_50430571_50435487
transcript_45444.known	chr12	+	435	1	FSM	ENSG00000244266.1	ENST00000498788.1	435	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGTAATCTTATATACGA	NA	False	NA	NA	False	AATACA	-30	NA	50365651	50366086	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_50365700_50366100
transcript_45445.known	chr12	+	586	5	FSM	ENSG00000161813.23	ENST00000551886.5	586	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	146.007491246169	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTAATTCTTGAAGTGTT	50390460	True	NA	37	True	AATAAA	-20	NA	50400931	50435599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_50401029_50427761_50427910_50428934_50429091_50430497_50430571_50435487
transcript_45450.known	chr12	+	8705	38	FSM	ENSG00000066084.13	ENST00000301180.10	8705	38	0	0	0	0	multi-exon	TRUE	canonical	3	53	junction_13	7.84165796932102	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTTAATCCTTCACAC	50498339	True	NA	10	True	AATAAA	-14	NA	50504984	50748657	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_50505241_50625975_50626048_50640723_50640853_50660193_50660320_50671185_50671399_50674473_50674630_50675328_50675449_50678678_50678877_50680671_50680764_50683137_50683249_50685832_50685957_50686572_50686683_50691048_50691152_50692948_50693014_50695266_50695361_50695847_50695968_50697060_50697176_50698327_50698468_50699065_50699203_50704139_50704221_50706537_50706666_50708447_50708563_50714394_50714597_50718708_50718819_50718954_50719036_50721272_50721397_50723201_50723324_50724774_50724887_50727702_50727813_50728547_50728679_50731368_50731538_50732365_50732537_50734134_50734197_50735072_50735131_50737035_50737111_50739408_50739587_50741415_50741540_50744586
transcript_45455.known	chr12	+	2676	8	FSM	ENSG00000066084.13	ENST00000549620.5	2676	8	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_6	6.43015853424394	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAGAACAGAAGTATTCTT	50498339	True	NA	NA	False	NA	NA	NA	50504984	50680282	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_50505241_50625975_50626048_50640723_50640853_50660193_50660320_50671185_50671399_50674473_50674630_50675328_50675449_50678678
transcript_45457.known	chr12	+	2412	7	FSM	ENSG00000123268.9	ENST00000262053.8	2412	7	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_3	9.20899318902754	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGCTCCTGGCCATGCTG	50762527	True	NA	44	True	AATATA	-23	NA	50764100	50821162	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_50764308_50780139_50780239_50795908_50796010_50809455_50809590_50814009_50814193_50814279_50814440_50819634
transcript_4546.nnic	chr1	-	2237	8	NNC	ENSG00000179163.12	novel	2043	8	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_7	30.3926682888207	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTATAGCTTTCTTTTC	-23867382	True	NA	12	True	AATAAA	-36	NA	23868310	23845076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_23845856_23846073_23846174_23848648_23848840_23854359_23854561_23859797_23859904_23863133_23863272_23865490_23865626_23867723
transcript_45460.nic	chr12	+	848	6	ISM	ENSG00000123268.9	ENST00000262053.8	2412	7	-35	6794	-12	0	5prime_fragment	TRUE	canonical	3	171	junction_3	9.87927122818278	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTCACCTCTCAGACAAC	50762492	True	NA	NA	False	NA	NA	NA	50764065	50814368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_50764308_50780139_50780239_50795908_50796010_50809455_50809590_50814009_50814193_50814279
transcript_45462.known	chr12	+	1825	3	FSM	ENSG00000185432.12	ENST00000547104.1	1825	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	68	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGTTTATATCTTTGCT	50924957	False	NA	29	True	AATAAA	-25	NA	50924982	50932507	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_50925537_50929913_50930292_50931614
transcript_45465.known	chr12	+	1846	3	FSM	ENSG00000185432.12	ENST00000550097.1	1846	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	68	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTTTGTAAAAGTACTAT	50924495	False	NA	7	True	AATAAA	-20	NA	50925040	50932438	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_50925537_50929913_50930423_50931597
transcript_45466.known	chr12	+	3117	2	FSM	ENSG00000185432.12	ENST00000332160.5	3117	2	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTATATCTTTGCTG	50924469	True	NA	30	True	AATAAA	-26	NA	50925014	50932508	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_50925537_50929913
transcript_4547.known	chr1	-	2043	8	FSM	ENSG00000179163.12	ENST00000374479.4	2043	8	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_3	13.2711133285641	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTATAGCTTTCTTTTC	-23867362	True	NA	12	True	AATAAA	-36	NA	23868290	23845076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23845856_23846073_23846174_23848648_23848840_23854359_23854561_23859797_23859904_23863133_23863272_23865490_23865626_23867897
transcript_45471.known	chr12	-	2125	18	FSM	ENSG00000110911.17	ENST00000546636.5	2125	18	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	83.0405745658197	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTACTACATTTCAATAAAA	-51022634	True	NA	-37	True	ATTAAA	-29	NA	51026368	50979819	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_50980059_50981638_50981804_50988381_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026314
transcript_45474.known	chr12	-	3762	17	FSM	ENSG00000110911.17	ENST00000644495.1	3762	17	0	0	0	0	multi-exon	FALSE	canonical	1	70	junction_1	67.5233466569156	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTGCCTATGTTCGTTT	-51022650	True	NA	-1	True	AATAAA	-18	NA	51026384	50979783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_50981804_50988381_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026309
transcript_45476.known	chr12	-	2486	17	FSM	ENSG00000110911.17	ENST00000547198.5	2486	17	0	0	0	0	multi-exon	FALSE	canonical	1	70	junction_1	68.088063381183	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCCAAAGAGCTTTAATAT	-51022604	True	NA	-15	True	ATTAAA	-15	NA	51026338	50981008	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_50981804_50988381_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026314
transcript_45483.known	chr12	-	1740	16	FSM	ENSG00000110911.17	ENST00000546743.5	1740	16	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_14	78.4871964080766	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTAGTCTGTCTTCTGCAG	-51022666	True	NA	NA	False	NA	NA	NA	51026400	50988319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008545_51010694_51010767_51026309
transcript_45485.known	chr12	-	4132	16	FSM	ENSG00000110911.17	ENST00000262052.9	4132	16	0	0	0	0	multi-exon	FALSE	canonical	1	86	junction_8	57.0908048638307	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTCCTGGGTATTTT	-51022650	True	NA	0	True	ATTAAA	-20	NA	51026384	50985991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026309
transcript_45486.nic	chr12	-	4161	16	ISM	ENSG00000110911.17	ENST00000547198.5	2486	17	-80	4983	-18	0	5prime_fragment	FALSE	canonical	1	86	junction_8	57.8594465541761	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTCCTGGGTATTTT	-51026354	False	NA	0	True	ATTAAA	-20	NA	51026418	50985991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026314
transcript_4549.known	chr1	+	814	3	FSM	ENSG00000189266.13	ENST00000374468.1	814	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	510	336	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACAAATGTTTAAATTTA	23938631	True	NA	NA	False	TATAAA	-3	NA	23959827	23961880	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_23959999_23960932_23961135_23961439
transcript_45493.nic	chr12	-	3580	16	ISM	ENSG00000110911.17	ENST00000547198.5	2486	17	-80	5564	-18	-409	5prime_fragment	FALSE	canonical	1	86	junction_8	57.8594465541761	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTTTATAAAGATGATATG	-51026354	False	NA	NA	False	NA	NA	NA	51026418	50986572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026314
transcript_45504.known	chr12	+	2106	9	FSM	ENSG00000050426.16	ENST00000262055.9	2106	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	21.8714282798358	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATGCATACTCTAATCAT	51045118	True	NA	21	True	AGTAAA	-30	NA	51048326	51060424	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_51048479_51049033_51049186_51052091_51052208_51053777_51053861_51055834_51056022_51056143_51056246_51056349_51056503_51058031_51058129_51059360
transcript_45505.known	chr12	+	1389	9	FSM	ENSG00000050426.16	ENST00000550929.5	1389	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	28.4953395312286	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTTACTTACATCTGTG	51045109	True	NA	NA	False	NA	NA	NA	51048317	51059805	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_51048372_51049033_51049186_51052091_51052208_51053777_51053861_51055834_51056022_51056143_51056246_51056349_51056503_51058031_51058129_51059360
transcript_45508.known	chr12	+	2001	8	FSM	ENSG00000050426.16	ENST00000547318.5	2001	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	27.2808522220107	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGATGGAAATGACTTAT	51045092	True	NA	6	True	AGTAAA	-15	NA	51048300	51060409	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_51048479_51049033_51049186_51053777_51053861_51055834_51056022_51056143_51056246_51056349_51056503_51058031_51058129_51059360
transcript_45509.nic	chr12	+	1994	8	NIC	ENSG00000050426.16	novel	2001	8	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	26.3516254387714	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTATGCATACTCTAAT	51045077	True	NA	18	True	AGTAAA	-27	NA	51048285	51060421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_51048479_51049033_51049186_51053811_51053861_51055834_51056022_51056143_51056246_51056349_51056503_51058031_51058129_51059360
transcript_45516.known	chr12	+	1665	6	FSM	ENSG00000050426.16	ENST00000547008.5	1665	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	34.5056517109879	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCACTGTTTTTAAACCCA	51045132	True	NA	-34	True	NA	NA	NA	51048340	51060369	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_51048479_51049033_51049186_51052091_51052208_51056349_51056503_51058031_51058129_51059360
transcript_45517.known	chr12	+	1480	5	FSM	ENSG00000050426.16	ENST00000550100.5	1480	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	33.0340733183179	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGTTTAGCTTTTGTGTG	51045135	True	NA	NA	False	NA	NA	NA	51048343	51060303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_51048479_51049033_51049186_51056349_51056503_51058031_51058129_51059360
transcript_45518.known	chr12	+	563	4	FSM	ENSG00000050426.16	ENST00000549686.5	563	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	40.9254063985795	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGAGGCAGAGAGAGGAGC	51045129	True	NA	NA	False	NA	NA	NA	51048337	51059532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_51048479_51056349_51056503_51058031_51058129_51059360
transcript_45519.known	chr12	+	1623	4	FSM	ENSG00000050426.16	ENST00000552645.5	1623	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	37.7211994624891	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTATGCATACTCTAAT	51045665	False	NA	18	True	AGTAAA	-27	NA	51048873	51060421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_51049186_51056349_51056503_51058031_51058129_51059360
transcript_45520.known	chr12	+	1566	5	FSM	ENSG00000050426.16	ENST00000380135.7	1566	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	42.2315048275574	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGAAGCACTGTTTTTA	51045135	True	NA	-40	True	NA	NA	NA	51048343	51060363	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_51048479_51049033_51049186_51056349_51056503_51058005_51058129_51059360
transcript_45521.known	chr12	+	1713	6	FSM	ENSG00000050426.16	ENST00000552739.5	1713	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	31.7704265001274	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAACCTGTTGATGGAAA	51045137	True	NA	-2	True	AGTAAA	-7	NA	51048345	51060401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_51048479_51055834_51056022_51056143_51056246_51056349_51056503_51058031_51058129_51059360
transcript_45526.nic	chr12	-	4674	5	NIC	ENSG00000110925.7	novel	4517	5	NA	NA	0	0	intron_retention	FALSE	canonical	1	3	junction_4	29.2318319644869	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGTTACTCTTTGTCT	NA	False	NA	0	True	ATTAAA	-17	NA	51083643	51061204	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_51064670_51067672_51067970_51073822_51074083_51076410_51076648_51083228
transcript_45527.known	chr12	-	4517	5	FSM	ENSG00000110925.7	ENST00000228515.6	4517	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	22.9455878111675	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGTTACTCTTTGTCT	-51082413	True	NA	0	True	ATTAAA	-17	NA	51083596	51061204	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_51064670_51067672_51067970_51073822_51074083_51076410_51076648_51083338
transcript_45530.nic	chr12	-	2805	5	NIC	ENSG00000110925.7	novel	4517	5	NA	NA	0	-1869	intron_retention	FALSE	canonical	1	3	junction_4	29.2318319644869	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGTTAAACTTGTCTATG	NA	False	NA	-24	True	NA	NA	NA	51083643	51063073	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_51064670_51067672_51067970_51073822_51074083_51076410_51076648_51083228
transcript_45533.nic	chr12	-	2217	5	NIC	ENSG00000110925.7	novel	4517	5	NA	NA	0	-2457	intron_retention	FALSE	canonical	1	3	junction_4	29.2318319644869	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTGCTGCTCCCATGTT	NA	False	NA	-5	True	AAAACA	-12	NA	51083643	51063661	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_51064670_51067672_51067970_51073822_51074083_51076410_51076648_51083228
transcript_45539.known	chr12	-	3807	15	FSM	ENSG00000135457.11	ENST00000257915.10	3807	15	0	0	0	0	multi-exon	TRUE	canonical	3	202	junction_14	31.52517620401	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTCTTAGTGAATGATTA	-51170666	True	NA	96	True	TTTAAA	-35	NA	51173135	51093655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_51095279_51095988_51096041_51098775_51098919_51099654_51099780_51101934_51102026_51103669_51103764_51104154_51104204_51106524_51106614_51107235_51107347_51109120_51109274_51110876_51110984_51116314_51116421_51117670_51117748_51118620_51118773_51172300
transcript_45542.known	chr12	-	1862	14	FSM	ENSG00000135457.11	ENST00000548115.5	1862	14	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_9	84.4018284106053	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGGCTGCTCCTTCCTTC	-51170443	False	NA	NA	False	NA	NA	NA	51172912	51095221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_51095276_51095988_51096041_51098775_51098919_51099654_51099780_51101934_51102026_51103669_51103764_51104154_51104204_51106524_51106614_51107235_51107347_51110876_51110984_51116314_51116421_51117670_51117748_51118620_51118773_51172300
transcript_45547.known	chr12	-	5157	11	FSM	ENSG00000184271.18	ENST00000636728.1	5157	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	4.97995983919549	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTCTGCTTGTTTCCTGT	-51217669	False	NA	0	True	AATAAA	-20	NA	51217693	51186935	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_51190593_51191595_51191765_51192329_51192472_51195969_51196174_51196798_51196928_51197769_51198024_51198549_51198687_51199746_51199869_51204172_51204369_51206788_51206884_51217641
transcript_45555.known	chr12	-	610	4	FSM	ENSG00000170545.17	ENST00000605426.5	610	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	33.5592345297419	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGTGATCTTGATCTTCTT	-51269938	False	556	NA	False	NA	NA	NA	51269958	51246084	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_51246120_51246750_51246832_51269244_51269317_51269536
transcript_45556.known	chr12	-	1875	4	FSM	ENSG00000170545.17	ENST00000603798.6	1875	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	33.5592345297419	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTGCCTCTGTTGTCCA	-51269859	True	NA	NA	False	ATTAAA	-25	NA	51270415	51244557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_51246120_51246750_51246832_51269244_51269317_51270255
transcript_45558.known	chr12	-	1518	3	FSM	ENSG00000170545.17	ENST00000603864.5	1518	3	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	3	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTATTCAAATTAAAAAT	-51269929	False	556	-60	True	NA	NA	NA	51269949	51245387	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_51246120_51246750_51246832_51269244
transcript_45559.known	chr12	+	2064	4	FSM	ENSG00000183283.16	ENST00000412716.8	2064	4	0	0	0	0	multi-exon	FALSE	canonical	2	251	junction_1	71.0226880807973	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTGATCATTTCATGAAT	51234825	True	NA	11	True	AATAAA	-20	NA	51238825	51243933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_51238921_51240342_51240462_51240870_51241117_51242329
transcript_45560.known	chr12	+	1811	4	FSM	ENSG00000183283.16	ENST00000436900.2	1811	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	132.592106351271	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCACTGCAAGGATTCTTT	51234902	False	NA	NA	False	AATAAA	-44	NA	51238902	51243785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_51238921_51240342_51240462_51240898_51241117_51242329
transcript_45561.known	chr12	+	11764	25	FSM	ENSG00000050438.17	ENST00000453097.7	11764	25	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_24	29.1294703293188	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACCTGTGGTGTTCTTTG	51423911	True	NA	3	True	AATAAA	-17	NA	51424830	51515763	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_51425036_51440707_51440790_51450875_51451023_51452123_51452260_51453538_51453700_51457350_51457540_51458558_51458651_51459950_51460109_51461203_51461292_51462309_51462457_51463613_51463715_51469613_51469789_51470391_51470526_51471286_51471533_51474341_51474448_51475044_51475207_51485786_51485901_51488698_51488861_51489699_51489952_51493703_51493773_51494944_51495119_51496986_51497125_51504028_51504121_51505834_51505931_51507425
transcript_45566.known	chr12	+	3834	22	FSM	ENSG00000050438.17	ENST00000319957.10	3834	22	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_19	27.022624266015	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACAAAAAAAAAAAGAAAAGA	51424053	False	NA	NA	False	AATATA	-17	NA	51424972	51497862	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_51425036_51440707_51440790_51450875_51451023_51452123_51452260_51453538_51453700_51457350_51457540_51458558_51458651_51459950_51460109_51461203_51461292_51462309_51462457_51463613_51463715_51469613_51469789_51470391_51470526_51471286_51471533_51474341_51474448_51475044_51475207_51485786_51485901_51488698_51488861_51489699_51489952_51493703_51493773_51494944_51495119_51496986
transcript_45577.known	chr12	+	2262	15	FSM	ENSG00000050438.17	ENST00000535225.6	2262	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	18.1913020256318	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTACTCACTTTCTTT	51391298	False	NA	1	True	AATAAA	-15	NA	51391316	51474575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_51391489_51440707_51440790_51450875_51451023_51452123_51452260_51453538_51453700_51457350_51457540_51458558_51458651_51459950_51460109_51461203_51461292_51462309_51462457_51463613_51463715_51469613_51469789_51470391_51470526_51471286_51471533_51474341
transcript_45579.nic	chr12	+	2320	15	ISM	ENSG00000050438.17	ENST00000319957.10	3834	22	-167	23287	-25	0	5prime_fragment	FALSE	canonical	3	59	junction_12	7.29446253492808	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTACTCACTTTCTTT	51423886	True	NA	1	True	AATAAA	-15	NA	51424805	51474575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_51425036_51440707_51440790_51450875_51451023_51452123_51452260_51453538_51453700_51457350_51457540_51458558_51458651_51459950_51460109_51461203_51461292_51462309_51462457_51463613_51463715_51469613_51469789_51470391_51470526_51471286_51471533_51474341
transcript_4558.known	chr1	-	866	6	FSM	ENSG00000188529.15	ENST00000374453.7	866	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	666.250283302004	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGGAAGGTGCTGCAGT	-23943647	True	NA	-128	True	AAAAAG	-34	NA	23980294	23967617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23967957_23971572_23971624_23971849_23972013_23974973_23975078_23978712_23978818_23980190
transcript_4560.known	chr1	-	1808	6	FSM	ENSG00000188529.15	ENST00000453840.7	1808	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	596.572543786588	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGGATTCCTTAGTTT	-23943649	True	NA	-2	True	AATAAA	-23	NA	23980296	23966444	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23967724_23971572_23971624_23971849_23972013_23974973_23975078_23978712_23978818_23980190
transcript_45607.nic	chr12	-	2777	12	NIC	ENSG00000139629.16	novel	5207	11	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_11	9.68853800090815	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACAAAAAAGAAG	-51391235	True	NA	NA	False	NA	NA	NA	51391673	51353768	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_51354493_51355805_51355959_51357348_51357451_51358129_51358262_51359131_51359333_51360720_51360839_51364120_51364356_51365429_51365580_51377194_51377368_51379290_51379885_51383460_51383583_51391600
transcript_45622.known	chr12	-	1005	1	FSM	ENSG00000284730.2	ENST00000642069.2	1005	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGAGAGTTTGTTAATC	-51814877	False	NA	NA	False	TATAAA	-19	NA	51814925	51813920	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_51813900_51814900
transcript_45625.known	chr12	+	3319	2	FSM	ENSG00000167612.13	ENST00000548526.1	3319	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGTATATGGCATATTAT	51888037	True	NA	NA	False	AGTAAA	-19	NA	51888102	51891657	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_51888332_51888567
transcript_45626.known	chr12	+	1791	10	FSM	ENSG00000135503.13	ENST00000541224.5	1791	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	10.5303793326209	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGAGCCCTGGCCCGCAA	51949496	True	NA	NA	False	NA	NA	NA	51951700	51994217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_51951835_51975264_51975505_51976326_51976576_51980968_51981200_51982685_51982809_51983998_51984167_51985191_51985349_51986817_51986943_51991862_51991994_51993984
transcript_45627.known	chr12	+	4531	9	FSM	ENSG00000135503.13	ENST00000257963.9	4531	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	5.78656849955135	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTCTGGTGCCATCTGT	51949494	True	NA	6	True	ATTAAA	-16	NA	51951698	51997078	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_51951835_51975264_51975505_51976326_51976576_51980968_51981200_51983998_51984167_51985191_51985349_51986817_51986943_51991862_51991994_51993984
transcript_45640.nic	chr12	+	2772	8	NIC	ENSG00000123358.20	novel	2029	7	NA	NA	-27	0	intron_retention	FALSE	canonical	3	61	junction_2	17.3816699134344	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGATTCAGTCTGTCTCT	52036458	True	NA	15	True	AATAAA	-21	NA	52037149	52059503	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_52037444_52041809_52041930_52054326_52055205_52056029_52056160_52056493_52056646_52057056_52057260_52057351_52057531_52058687
transcript_45644.known	chr12	+	2485	7	FSM	ENSG00000123358.20	ENST00000394825.6	2485	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	36.83936602181	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGATTCAGTCTGTCTCT	52051175	True	NA	15	True	AATAAA	-21	NA	52051441	52059503	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_52051569_52054326_52055205_52056029_52056160_52056493_52056646_52057056_52057260_52057351_52057531_52058687
transcript_45646.known	chr12	+	2589	8	FSM	ENSG00000123358.20	ENST00000360284.7	2589	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	37.4601829429923	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCAGTCTGTCTCTGAT	NA	False	NA	18	True	AATAAA	-24	NA	52022831	52059506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_52022940_52041809_52041930_52054326_52055205_52056029_52056160_52056493_52056646_52057056_52057260_52057351_52057531_52058687
transcript_45648.known	chr12	+	846	4	FSM	ENSG00000123395.15	ENST00000553049.5	846	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	181.846699783698	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTCCTTCCAGATCACT	52065020	True	NA	NA	False	NA	NA	NA	52070002	52077104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_52070072_52070353_52070484_52073574_52073903_52076785
transcript_45649.known	chr12	+	1433	4	FSM	ENSG00000123395.15	ENST00000336854.9	1433	4	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_1	58.1262992686328	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATCTCTCCCTTGTCTTG	52064995	True	NA	16	True	AATAAA	-25	NA	52069977	52077495	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_52070243_52070353_52070484_52073574_52073903_52076785
transcript_4565.known	chr1	-	2917	6	FSM	ENSG00000188529.15	ENST00000343255.9	2917	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	601.9014537281	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATGATTAACTGGAAT	-23943680	True	NA	NA	False	AATAAA	-14	NA	23980327	23969082	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23971440_23971572_23971624_23971849_23972013_23974973_23975078_23978712_23978818_23980190
transcript_45650.known	chr12	-	3894	9	FSM	ENSG00000167767.14	ENST00000313234.9	3894	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTCTCAGGGATTTCTT	NA	False	NA	NA	False	AATAAA	-21	NA	52192000	52168995	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_52171558_52171657_52171714_52172197_52172419_52173037_52173164_52173599_52173765_52180512_52180609_52180902_52180964_52185378_52185588_52191602
transcript_45651.known	chr12	+	1625	9	FSM	ENSG00000135480.17	ENST00000331817.6	1625	9	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	4.05431868505671	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCCTGGTATCCTGGCTT	52232516	True	NA	10	True	AATAAA	-31	NA	52233242	52248921	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_52233621_52235154_52235367_52237508_52237570_52238679_52238776_52241471_52241637_52243011_52243138_52245411_52245633_52248176_52248212_52248590
transcript_45666.known	chr12	-	1687	9	FSM	ENSG00000170421.13	ENST00000552150.5	1687	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	986.136455758025	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGTTTACTACCTGGGGA	NA	False	NA	-114	True	NA	NA	NA	52926469	52897296	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_52897619_52898460_52898520_52898678_52898900_52899774_52900066_52900587_52900684_52901158_52901220_52901863_52902073_52904657_52905028_52926411
transcript_45671.known	chr12	+	1420	8	FSM	ENSG00000111057.11	ENST00000388837.6	1420	8	0	0	0	0	multi-exon	FALSE	canonical	1	708	junction_1	2707.31093334251	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGATGTCACTTTGTCTT	52948718	False	NA	17	True	AATAAA	-14	NA	52948870	52952900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_52948939_52949172_52949591_52950327_52950411_52950749_52950907_52951480_52951646_52951730_52951857_52952118_52952343_52952721
transcript_45680.known	chr12	+	1413	7	FSM	ENSG00000111057.11	ENST00000388835.4	1413	7	0	0	0	0	multi-exon	FALSE	canonical	1	2195	junction_3	1957.13334156533	5933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCACTTTGTCTTCTTTTG	52895917	True	NA	23	True	AATAAA	-20	NA	52949117	52952906	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_52949591_52950327_52950411_52950749_52950907_52951480_52951646_52951730_52951857_52952118_52952343_52952721
transcript_45695.known	chr12	+	2088	5	FSM	ENSG00000111057.11	ENST00000549078.5	2088	5	0	0	0	0	multi-exon	FALSE	canonical	1	2195	junction_2	2147.20364660644	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGGAGGCCAATAAAAAGTT	52895926	True	NA	-11	True	NA	NA	NA	52949126	52952872	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_52949591_52950327_52950907_52951480_52951646_52951730_52951857_52952118
transcript_45702.known	chr12	-	2437	3	FSM	ENSG00000170421.13	ENST00000619952.2	2437	3	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	10	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACGTACTGCCTTTTACT	-52948598	True	NA	NA	False	AATAAA	-18	NA	52949874	52946613	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_52948829_52949455_52949518_52949714
transcript_45703.known	chr12	-	507	3	FSM	ENSG00000170421.13	ENST00000551318.1	507	3	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	24.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGATGGTGCACGCCTGT	-52948644	True	NA	-12	True	AATACA	-14	NA	52949920	52948650	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_52948829_52949455_52949579_52949714
transcript_45706.known	chr12	-	542	2	FSM	ENSG00000170421.13	ENST00000546921.1	542	2	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGTAGTTGGTGGAGAAGG	NA	False	NA	NA	False	NA	NA	NA	52949954	52949215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_52949518_52949714
transcript_45707.known	chr12	-	2126	9	FSM	ENSG00000170421.13	ENST00000552551.5	2126	9	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_8	966.717092793957	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTGTGTGCATCTG	-52948566	True	NA	-4	True	AATAAA	-25	NA	52949842	52897186	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_52897619_52898460_52898520_52898678_52898900_52899774_52900066_52900587_52900684_52901158_52901220_52901863_52902073_52904657_52905028_52949455
transcript_45708.known	chr12	-	2202	7	FSM	ENSG00000170421.13	ENST00000550170.5	2202	7	0	0	0	0	multi-exon	FALSE	canonical	3	2856	junction_5	102.243853387651	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAACCTCAGCTAGCTCT	-52887808	True	NA	-33	True	AAAACA	-30	NA	52905044	52897215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_52897619_52898460_52898520_52898678_52898900_52899774_52900066_52900587_52901220_52901863_52902073_52904657
transcript_45709.known	chr12	+	4848	29	FSM	ENSG00000111077.18	ENST00000314250.11	4848	29	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	5.02798292010802	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAGTCAACACTTATTCA	53049889	True	NA	20	True	AATAAA	-26	NA	53050064	53064379	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53050261_53051854_53051964_53052454_53052493_53053410_53053450_53053773_53053813_53053964_53054015_53054269_53054442_53055185_53055237_53055567_53055691_53055780_53055846_53057012_53057097_53057566_53057680_53057772_53057834_53058026_53058103_53058315_53058446_53058571_53058638_53058713_53058828_53059046_53060259_53060404_53060556_53060674_53061265_53061379_53061470_53061814_53061941_53062152_53062246_53062375_53062454_53062619_53062698_53063088_53063258_53063348_53063418_53063562_53063593_53063743
transcript_45717.known	chr12	+	1936	15	FSM	ENSG00000063046.18	ENST00000420463.7	1936	15	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_10	401.663454414569	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCAAAACCTCTATCCAG	52977002	True	NA	-82	True	NA	NA	NA	53006455	53040280	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53006497_53016472_53016611_53018797_53019007_53019909_53020027_53021805_53021861_53022492_53022628_53027781_53027920_53028014_53028189_53033805_53034035_53034611_53034725_53037408_53037623_53038355_53038412_53039237_53039344_53039629_53039703_53040142
transcript_45720.known	chr12	-	2902	11	FSM	ENSG00000167778.9	ENST00000301463.9	2902	11	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_8	6.84178339323893	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTGATCCTACTCTGA	-53078597	True	NA	0	True	AATAGA	-18	NA	53079390	53064315	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_53065967_53066313_53066487_53066572_53066693_53067647_53067706_53068154_53068305_53073285_53073472_53074648_53074785_53075094_53075220_53075735_53075812_53077114_53077262_53079310
transcript_45727.nic	chr12	+	1200	9	ISM	ENSG00000063046.18	ENST00000420463.7	1936	15	-27	6309	-2	-648	5prime_fragment	FALSE	canonical	3	874	junction_1	257.627516969752	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAACAAGAGAAGTTGCAGC	52976975	True	NA	NA	False	NA	NA	NA	53006428	53033971	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_53006497_53016472_53016611_53018797_53019007_53019909_53020027_53021805_53021861_53022492_53022628_53027781_53027920_53028014_53028189_53033805
transcript_45733.known	chr12	-	2863	4	FSM	ENSG00000257337.8	ENST00000546793.1	2863	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	2.05480466765633	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCTATTTTTATGTTCC	-53054032	True	NA	NA	False	CATAAA	-16	NA	53054438	53043188	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_53045654_53045960_53046062_53053395_53053575_53054320
transcript_45736.known	chr12	+	4737	29	FSM	ENSG00000111077.18	ENST00000379902.7	4737	29	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	5.32550179680329	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGCCGAAATTGGAGTCAA	53046894	False	NA	10	True	AATAAA	-16	NA	53046968	53064369	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53047064_53051854_53051964_53052454_53052493_53053410_53053450_53053773_53053813_53053964_53054015_53054269_53054442_53055185_53055237_53055567_53055691_53055780_53055846_53057012_53057097_53057566_53057680_53057772_53057834_53058026_53058103_53058315_53058446_53058571_53058638_53058713_53058828_53059046_53060259_53060404_53060556_53060674_53061265_53061379_53061470_53061814_53061941_53062152_53062246_53062375_53062454_53062619_53062698_53063088_53063258_53063348_53063418_53063562_53063593_53063743
transcript_45737.known	chr12	+	947	4	FSM	ENSG00000167779.9	ENST00000301464.4	947	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	17.9691092959247	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCTTGTGTCTCTGTGT	53097138	True	NA	10	True	AATAAA	-16	NA	53097666	53102340	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53098052_53100711_53100858_53101040_53101161_53102044
transcript_45739.known	chr12	+	1177	4	FSM	ENSG00000167779.9	ENST00000548547.5	1177	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	33.8657480190367	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTCTGTGTCTGCC	NA	False	NA	15	True	AATAAA	-21	NA	53097435	53102345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53098052_53100717_53100858_53101040_53101161_53102044
transcript_4574.known	chr1	-	1089	5	FSM	ENSG00000188529.15	ENST00000484146.6	1089	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	744.178741969965	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCACATGCAGTTTACATC	-23943709	True	NA	NA	False	NA	NA	NA	23980356	23967172	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23967724_23971849_23972013_23974973_23975078_23978712_23978818_23980190
transcript_45740.known	chr12	-	2379	16	FSM	ENSG00000139631.20	ENST00000379850.7	2379	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	2.84722086720835	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATAAAGTTAAAATTTC	-53180368	True	NA	-26	True	AATGAA	-25	NA	53180596	53157689	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_53158685_53159622_53159713_53159886_53159939_53160119_53160320_53160762_53160845_53161126_53161192_53161272_53161390_53170071_53170127_53170422_53170503_53171325_53171442_53171881_53171989_53172345_53172437_53172521_53172649_53173344_53173477_53173727_53173768_53180566
transcript_45742.known	chr12	+	8557	7	FSM	ENSG00000139651.11	ENST00000416904.5	8557	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	2.5603819159562	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTGCCCAGAGCAGAG	53178762	True	NA	NA	False	AATAAA	-22	NA	53180721	53195142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53180838_53181676_53181993_53184890_53185041_53185386_53185477_53185953_53186078_53186390_53186510_53187500
transcript_45752.known	chr12	-	2806	16	FSM	ENSG00000139626.16	ENST00000267082.10	2806	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGCTGTCACTTTGCTT	-53207192	False	NA	-4	True	AATAAA	-14	NA	53207251	53191322	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_53191637_53191858_53192020_53192329_53192539_53192690_53192911_53193139_53193364_53193707_53193902_53194197_53194345_53195373_53195464_53195625_53195722_53196040_53196200_53196578_53196821_53197492_53197664_53197749_53197952_53200242_53200447_53201071_53201195_53207201
transcript_45760.nic	chr12	-	3206	10	NIC	ENSG00000172819.17	novel	2917	10	NA	NA	273	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_9	122.773504199128	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATGTGGCTCCCTTTAG	-53231894	False	385	-3	True	AATAAA	-15	NA	53231915	53210568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_53211864_53213084_53213244_53213495_53213701_53214058_53214236_53214445_53214607_53215292_53215435_53215645_53215795_53227361_53227688_53231168_53231236_53231390
transcript_45762.known	chr12	-	2917	10	FSM	ENSG00000172819.17	ENST00000425354.7	2917	10	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_9	118.37677867046	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATGTGGCTCCCTTTAG	-53231824	True	NA	-3	True	AATAAA	-15	NA	53232209	53210568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_53211864_53213084_53213244_53213495_53213701_53214058_53214236_53214445_53214607_53215292_53215435_53215645_53215795_53227361_53227688_53231168_53231236_53231973
transcript_45769.known	chr12	-	2640	9	FSM	ENSG00000172819.17	ENST00000394426.5	2640	9	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	129.702303371991	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTGGCTCCCTTTAGGA	-53232235	False	NA	-1	True	AATAAA	-17	NA	53232256	53210566	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_53211864_53213084_53213244_53213495_53213701_53214058_53214236_53214445_53214607_53215292_53215435_53215645_53215795_53231168_53231236_53231973
transcript_45772.known	chr12	-	1836	8	FSM	ENSG00000172819.17	ENST00000338561.9	1836	8	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_7	58.8325191209968	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTGGCTCTCTGAGAG	-53220125	False	331	NA	False	NA	NA	NA	53220259	53211330	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_53211864_53213084_53213244_53213495_53213701_53214058_53214236_53214445_53214607_53215292_53215435_53215645_53215795_53219949
transcript_45776.known	chr12	-	1779	7	FSM	ENSG00000172819.17	ENST00000543726.1	1779	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	119.587369269873	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCCTAGACTTCCCAGGG	-53220279	False	NA	NA	False	NA	NA	NA	53220413	53211392	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_53211864_53213084_53213244_53213495_53213701_53214058_53214236_53214445_53214607_53215292_53215435_53219949
transcript_45786.known	chr12	+	1763	2	FSM	ENSG00000182544.9	ENST00000329548.5	1763	2	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	0	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTTGATTTACTCATCC	53249830	True	NA	21	True	AATAAA	-17	NA	53252094	53254406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53252269_53252817
transcript_45787.known	chr12	+	427	2	FSM	ENSG00000182544.9	ENST00000552097.1	427	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTACTTTGTGCTGCTAG	53252436	False	NA	NA	False	NA	NA	NA	53252448	53253209	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53252484_53252817
transcript_45788.known	chr12	+	6618	31	FSM	ENSG00000135476.12	ENST00000257934.9	6618	31	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	39.1046459302898	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTTTGCGTAGTTTAT	53266128	True	NA	8	True	AATAAA	-16	NA	53268298	53293638	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53268378_53268754_53268848_53269023_53270086_53270377_53270483_53270677_53270799_53272720_53272858_53274816_53275011_53276619_53276860_53277082_53277228_53277469_53277609_53277820_53277961_53279731_53279867_53281506_53281627_53282263_53282436_53283128_53283258_53283381_53283539_53284057_53284168_53285923_53286913_53287971_53288342_53288537_53288700_53289089_53289304_53289403_53289595_53290084_53290213_53290346_53290470_53290840_53290997_53291689_53291861_53291983_53292089_53292277_53292394_53292573_53292658_53292805_53292971_53293272
transcript_45789.known	chr12	+	6665	31	FSM	ENSG00000135476.12	ENST00000552671.5	6665	31	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	45.6781007583381	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTTTGCGTAGTTTAT	53266162	True	NA	8	True	AATAAA	-16	NA	53268332	53293638	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53268378_53268754_53268929_53269023_53270086_53270377_53270483_53270677_53270799_53272720_53272858_53274816_53275011_53276619_53276860_53277082_53277228_53277469_53277609_53277820_53277961_53279731_53279867_53281506_53281627_53282263_53282436_53283128_53283258_53283381_53283539_53284057_53284168_53285923_53286913_53287971_53288342_53288537_53288700_53289089_53289304_53289403_53289595_53290084_53290213_53290346_53290470_53290840_53290997_53291689_53291861_53291983_53292089_53292277_53292394_53292573_53292658_53292805_53292971_53293272
transcript_45800.known	chr12	+	2360	11	FSM	ENSG00000288663.1	ENST00000677982.1	2360	11	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_6	1355.42369759422	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTCCATCTCATACTGAC	53274152	True	NA	0	True	AATAAA	-1	NA	53295506	53307158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53295640_53295838_53296276_53297849_53297925_53298044_53298151_53299268_53299954_53300149_53300263_53303033_53303194_53305907_53306061_53306197_53306321_53306679_53306862_53306965
transcript_45801.known	chr12	+	640	6	FSM	ENSG00000123349.15	ENST00000676468.1	640	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	1280.64193278215	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTCTTTTCTTGGATTAA	53274170	True	NA	31	True	AATAAA	-21	NA	53295524	53299452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53295640_53295838_53295942_53296218_53296276_53297849_53297925_53298044_53298151_53299268
transcript_45802.known	chr12	+	596	6	FSM	ENSG00000123349.15	ENST00000334478.9	596	6	0	0	0	0	multi-exon	FALSE	canonical	3	2765	junction_2	207.425552909954	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTCTTTTCTTGGATT	53274187	True	NA	29	True	AATAAA	-19	NA	53295541	53299450	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53295640_53295838_53295942_53296243_53296276_53297849_53297925_53298044_53298151_53299268
transcript_45803.known	chr12	+	635	6	FSM	ENSG00000123349.15	ENST00000549759.2	635	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	1541.46807946191	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTTGGTCTTTTCTTGG	53274151	True	NA	26	True	AATAAA	-16	NA	53295505	53299447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53295640_53295838_53295942_53296429_53296468_53297849_53297925_53298044_53298151_53299268
transcript_45807.known	chr12	+	564	5	FSM	ENSG00000123349.15	ENST00000243040.10	564	5	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	1358.27666548461	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTCTTTTCTTGGATT	53274187	True	NA	29	True	AATAAA	-19	NA	53295541	53299450	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53295640_53295838_53295942_53297849_53297925_53298044_53298151_53299268
transcript_45808.known	chr12	+	946	5	FSM	ENSG00000123349.15	ENST00000550069.2	946	5	0	0	0	0	multi-exon	TRUE	canonical	2	126	junction_3	1319.18402810222	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGCAGAATGTTGGTCT	NA	False	NA	18	True	AATAAA	-8	NA	53295478	53299439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53295640_53295838_53296276_53297849_53297925_53298048_53298151_53299268
transcript_45810.known	chr12	+	559	5	FSM	ENSG00000123349.15	ENST00000547130.6	559	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	1606.84852661973	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTCTTTTCTTGGATT	53274187	True	NA	29	True	AATAAA	-19	NA	53295541	53299450	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53295640_53296453_53296552_53297849_53297925_53298044_53298151_53299268
transcript_45811.known	chr12	+	1848	10	FSM	ENSG00000288663.1	ENST00000676527.1	1848	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	1409.85434848803	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGACCCAGTCCTTGACT	53295471	False	NA	13	True	AATAAA	-14	NA	53295491	53307171	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53295640_53296218_53296276_53297849_53297925_53298044_53298151_53299268_53299954_53300149_53300263_53305907_53306061_53306197_53306321_53306679_53306862_53306965
transcript_45812.known	chr12	+	595	5	FSM	ENSG00000123349.15	ENST00000550880.5	595	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	1606.33766297749	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAATGTTGGTCTTTTCTT	53274170	True	NA	24	True	AATAAA	-14	NA	53295524	53299445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53295640_53296429_53296552_53297849_53297925_53298044_53298151_53299268
transcript_45813.known	chr12	+	2441	4	FSM	ENSG00000123349.15	ENST00000677712.1	2441	4	0	0	0	0	multi-exon	FALSE	canonical	3	2989	junction_1	134.015753634497	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCAGCTGGGCAGAATGT	53274201	True	NA	12	True	AATAAA	-2	NA	53295555	53299433	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53295640_53295838_53297925_53298044_53298151_53299268
transcript_45814.known	chr12	+	478	4	FSM	ENSG00000123349.15	ENST00000351500.7	478	4	0	0	0	0	multi-exon	FALSE	canonical	3	489	junction_1	1306.6769557418	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTCTTTTCTTGGATT	53274170	True	NA	29	True	AATAAA	-19	NA	53295524	53299450	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53295640_53297849_53297925_53298044_53298151_53299268
transcript_45815.known	chr12	+	392	3	FSM	ENSG00000123349.15	ENST00000550846.5	392	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	1583	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTCTTTTCTTGGATT	53274181	True	NA	29	True	AATAAA	-19	NA	53295535	53299450	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53295640_53298044_53298151_53299268
transcript_45816.known	chr12	-	647	2	FSM	ENSG00000257605.3	ENST00000550263.3	697	2	50	0	50	0	multi-exon	FALSE	canonical	2	7	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGATGGGGAAAGATTTT	-53300302	False	NA	NA	False	ATTAAA	-23	NA	53300314	53298654	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_53299130_53300142
transcript_45818.known	chr12	+	2040	12	FSM	ENSG00000288663.1	ENST00000676940.1	2040	12	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_7	1339.31758866439	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTCCATCTCATACTGAC	53274170	True	NA	0	True	AATAAA	-1	NA	53295524	53307158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53295640_53295838_53295942_53296243_53296276_53297849_53297925_53298044_53298151_53299268_53299954_53300149_53300263_53303033_53303194_53305907_53306061_53306197_53306321_53306679_53306862_53306965
transcript_45819.known	chr12	+	528	5	FSM	ENSG00000123349.15	ENST00000628881.2	528	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	1406.06089839665	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTCTTTTCTTGGATTAA	53274154	True	NA	31	True	AATAAA	-21	NA	53295508	53299452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53295640_53296243_53296276_53297849_53297925_53298044_53298151_53299268
transcript_4582.known	chr1	-	790	3	FSM	ENSG00000188529.15	ENST00000485292.1	790	3	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	712.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTTGTGATTGTGGTCT	-23943684	True	NA	NA	False	NA	NA	NA	23980331	23977789	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_23978274_23978652_23978818_23980190
transcript_45820.known	chr12	+	1202	7	FSM	ENSG00000139637.14	ENST00000267103.10	1202	7	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_2	22.2311093340441	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCCTTGACTTATTCT	53294049	True	NA	19	True	AATAAA	-20	NA	53299694	53307177	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53299954_53300149_53300263_53303033_53303194_53305907_53306061_53306197_53306321_53306679_53306862_53306965
transcript_45821.known	chr12	+	988	6	FSM	ENSG00000139637.14	ENST00000548632.5	988	6	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_3	172.518288885556	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGACCCAGTCCTTGACT	53294104	True	NA	13	True	AATAAA	-14	NA	53299749	53307171	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53299954_53300149_53300263_53303033_53303194_53306197_53306321_53306679_53306862_53306965
transcript_45824.known	chr12	-	1815	16	FSM	ENSG00000094914.14	ENST00000209873.9	1815	16	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_15	54.8826627148015	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTTACCAGTCTGTCTT	-53316768	True	NA	-7	True	AATAAA	-23	NA	53321610	53307459	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_53307714_53307844_53307930_53308051_53308134_53308281_53308350_53308434_53308529_53308724_53308816_53308959_53309021_53309156_53309282_53309600_53309722_53314297_53314442_53314750_53314850_53315093_53315141_53315334_53315427_53315726_53315783_53320564_53320693_53321342
transcript_45825.nic	chr12	-	1705	16	NIC	ENSG00000094914.14	novel	1815	16	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	117.361814725044	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTTACCAGTCTGTCTT	-53316786	True	NA	-7	True	AATAAA	-23	NA	53321628	53307459	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_53307714_53307844_53307930_53308051_53308134_53308281_53308350_53308434_53308529_53308724_53308816_53308959_53309021_53309156_53309282_53309600_53309722_53314297_53314442_53314750_53314850_53315093_53315141_53315334_53315427_53315726_53315783_53320564_53320693_53321470
transcript_45834.known	chr12	-	1703	15	FSM	ENSG00000094914.14	ENST00000394384.7	1703	15	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_10	118.364212220983	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTACCAGTCTGTCTTT	-53316754	True	NA	-6	True	AATAAA	-24	NA	53321596	53307458	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_53307714_53307844_53307930_53308051_53308134_53308281_53308350_53308434_53308529_53308724_53308816_53308959_53309021_53309156_53309282_53309600_53309722_53314297_53314442_53315093_53315141_53315334_53315427_53315726_53315783_53320564_53320693_53321342
transcript_45856.known	chr12	+	1814	15	FSM	ENSG00000197111.16	ENST00000359462.9	1814	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	255.582577813185	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATGTGGGTTTTATTCC	53452114	False	NA	50	True	AATAGA	-18	NA	53452128	53479832	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53452377_53454725_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462480_53462568_53464759_53464853_53465931_53465974_53467220_53467294_53467804_53467844_53468776_53468833_53471637_53471808_53479405
transcript_45860.known	chr12	+	1342	15	FSM	ENSG00000197111.16	ENST00000552296.6	1342	15	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_12	233.654954484389	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTCAGCTGTTGATG	53446962	True	NA	32	True	ATTAAA	-16	NA	53452367	53479614	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53452377_53454725_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462492_53462568_53464759_53464853_53465931_53465974_53467220_53467294_53467804_53467844_53468779_53468833_53471637_53471808_53479405
transcript_45863.known	chr12	-	4319	15	FSM	ENSG00000139625.13	ENST00000267079.6	4319	15	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_13	23.7341784035133	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAGAAGCTTATAAAACTA	-53499593	False	NA	NA	False	NA	NA	NA	53499615	53479668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_53481281_53481940_53482212_53482298_53482370_53482564_53483190_53483348_53483487_53483606_53483724_53483910_53484021_53484256_53484366_53485055_53485215_53485316_53485476_53486055_53486248_53486438_53486623_53486946_53487156_53487254_53487429_53499426
transcript_45868.known	chr12	+	3077	14	FSM	ENSG00000197111.16	ENST00000447282.5	3077	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	262.917405529146	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGGAATACGAGTGGCTT	53452087	True	NA	9	True	TATAAA	-14	NA	53452101	53481161	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53452377_53454725_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462480_53462568_53465931_53465974_53467220_53467294_53467804_53467844_53468776_53468833_53471637_53471808_53479405
transcript_4587.known	chr1	-	2817	7	FSM	ENSG00000142677.4	ENST00000270800.2	2817	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.897527467855751	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGTGATTTTTTTTTT	-24142838	False	NA	NA	False	AATAAA	-13	NA	24143140	24119770	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_24121738_24123301_24123424_24128140_24128280_24134210_24134387_24137130_24137310_24138581_24138715_24143039
transcript_45873.known	chr12	+	1730	14	FSM	ENSG00000197111.16	ENST00000359282.9	1730	14	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_1	224.250045351694	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGATTCATGTGGGTTT	53452087	True	NA	44	True	ATTAAA	-44	NA	53452101	53479826	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53452377_53454725_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462492_53462568_53465931_53465974_53467220_53467294_53467804_53467844_53468776_53468833_53471637_53471808_53479405
transcript_45878.known	chr12	-	4261	14	FSM	ENSG00000139625.13	ENST00000547488.6	4261	14	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_13	18.8174035019769	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAGAAGCTTATAAAACTA	-53498721	True	NA	NA	False	NA	NA	NA	53499458	53479668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_53481281_53481940_53482212_53482298_53482370_53482564_53483190_53483348_53483487_53483606_53483724_53483910_53484021_53484256_53484366_53485055_53485215_53485316_53485476_53486055_53486248_53486438_53486623_53486946_53487429_53499426
transcript_45881.known	chr12	+	1619	13	FSM	ENSG00000197111.16	ENST00000549863.5	1619	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	286.69218636409	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAAAAAAATTAAAAGATGG	53452111	False	NA	-13	True	AATACA	-33	NA	53452125	53479769	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53452377_53454725_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462480_53462568_53467220_53467294_53467804_53467844_53468776_53468833_53471637_53471808_53479405
transcript_45883.known	chr12	+	3026	13	FSM	ENSG00000197111.16	ENST00000437231.5	3026	13	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_1	227.216291351557	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGGAATACGAGTGGCTT	53452087	True	NA	9	True	TATAAA	-14	NA	53452101	53481161	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53452377_53454725_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462492_53462568_53465931_53465974_53467220_53467294_53468776_53468833_53471637_53471808_53479405
transcript_45892.known	chr12	+	1105	4	FSM	ENSG00000205352.11	ENST00000429243.7	1105	4	0	0	0	0	multi-exon	FALSE	canonical	3	1530	junction_1	295.398412694148	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACCTGTGCTATCACCT	53433770	True	NA	27	True	AATAAA	-20	NA	53441733	53446638	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53441793_53442694_53442734_53443390_53443774_53446014
transcript_45893.known	chr12	+	1009	4	FSM	ENSG00000205352.11	ENST00000551003.5	1009	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	866.227452809018	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTCACCTGTGCTATCAC	53433768	True	NA	25	True	AATAAA	-18	NA	53441731	53446636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53441793_53442694_53442734_53443486_53443774_53446014
transcript_45894.known	chr12	+	927	4	FSM	ENSG00000205352.11	ENST00000379786.8	927	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	857.603378931984	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACCTGTGCTATCACCT	53433798	True	NA	27	True	AATAAA	-20	NA	53441761	53446638	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53441793_53442694_53442734_53443540_53443774_53446014
transcript_45895.known	chr12	+	755	4	FSM	ENSG00000205352.11	ENST00000549068.5	755	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	876.22156000764	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGCAGGCCTTTTGTTG	53433781	True	NA	-49	True	AATACA	-3	NA	53441744	53446475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53441793_53442694_53442734_53443566_53443774_53446014
transcript_45896.known	chr12	+	755	4	FSM	ENSG00000205352.11	ENST00000549135.1	755	4	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	942.53287593708	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTAAATGTTGAAGACAAG	53434591	False	NA	-10	True	AATGAA	-33	NA	53442554	53446315	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53442587_53442694_53442734_53443390_53443774_53446014
transcript_45897.known	chr12	+	786	3	FSM	ENSG00000205352.11	ENST00000549740.5	786	3	0	0	0	0	multi-exon	FALSE	canonical	3	1530	junction_1	335.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGACACGCCCACTGACA	53433783	True	NA	NA	False	NA	NA	NA	53441746	53444091	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53441793_53442694_53442734_53443390
transcript_45899.known	chr12	+	1418	12	FSM	ENSG00000197111.16	ENST00000552819.5	1418	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	266.608450945769	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACAGTGATTCATGTGGGT	53454472	True	NA	42	True	ATTAAA	-42	NA	53454733	53479824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462480_53462568_53465931_53465974_53467220_53467294_53468776_53468833_53471637_53471808_53479405
transcript_4590.known	chr1	-	4566	7	FSM	ENSG00000185436.12	ENST00000327535.6	4566	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	19.6277864263905	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTACAATTGAATGGAAAAG	-24186093	True	NA	NA	False	AATAAA	-24	NA	24187289	24154167	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_24157892_24159051_24159183_24159473_24159634_24161541_24161685_24169416_24169602_24180730_24180855_24187190
transcript_45902.nic	chr12	+	2014	9	NIC	ENSG00000139546.11	novel	1510	9	NA	NA	-56	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_5	134.951843262699	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTCTCTTCTGTTTCCT	53500833	False	NA	27	True	AATAAA	-24	NA	53500864	53506431	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_53501462_53502014_53502185_53503026_53503130_53503712_53503809_53504396_53504470_53504611_53504816_53505134_53505263_53505648_53505851_53505990
transcript_45903.known	chr12	+	1510	9	FSM	ENSG00000139546.11	ENST00000266987.7	1510	9	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_3	50.9386886364382	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTCTCTTCTGTTTCCT	53493782	True	NA	27	True	AATAAA	-24	NA	53501282	53506431	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53501462_53502014_53502185_53503026_53503130_53503712_53503809_53504396_53504470_53504697_53504816_53505134_53505263_53505648_53505851_53505990
transcript_45909.known	chr12	+	1514	9	FSM	ENSG00000139546.11	ENST00000549572.5	1514	9	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_5	156.83903970313	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTAAGCCCTTCTCTTC	53501018	True	NA	19	True	AATAAA	-16	NA	53501603	53506423	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53501709_53502014_53502185_53503026_53503130_53503712_53503809_53504396_53504470_53504611_53504816_53505134_53505263_53505648_53505851_53505990
transcript_45910.known	chr12	+	1402	9	FSM	ENSG00000139546.11	ENST00000394357.6	1402	9	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	112.281384810662	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTTGTGGATTTTTAAG	53501033	False	NA	8	True	AATAAA	-5	NA	53501618	53506412	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53501709_53502014_53502185_53503026_53503130_53503712_53503809_53504396_53504470_53504697_53504816_53505134_53505263_53505648_53505851_53505990
transcript_45914.known	chr12	+	1466	9	FSM	ENSG00000139546.11	ENST00000549679.5	1466	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	165.152959404305	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGGAATAAATATGCTGC	53501019	True	NA	-8	True	AATGAA	-22	NA	53501604	53506396	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53501709_53502014_53502185_53503026_53503213_53503729_53503809_53504396_53504470_53504697_53504816_53505134_53505263_53505648_53505851_53505990
transcript_45916.nic	chr12	+	1387	8	NIC	ENSG00000139546.11	novel	1510	9	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_6	136.935706647689	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTCTCTTCTGTTTCCT	53493777	True	NA	27	True	AATAAA	-24	NA	53501277	53506431	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_53501462_53502014_53502185_53503026_53503130_53503712_53503809_53504396_53504470_53504697_53504816_53505648_53505851_53505990
transcript_45925.nic	chr12	+	1345	8	NIC	ENSG00000139546.11	novel	1510	9	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	137.262447857514	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTCTCTTCTGTTTCCT	53493777	True	NA	27	True	AATAAA	-24	NA	53501277	53506431	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_53501462_53503026_53503130_53503712_53503809_53504396_53504470_53504697_53504816_53505134_53505263_53505648_53505851_53505990
transcript_4593.known	chr1	-	1476	6	FSM	ENSG00000185436.12	ENST00000327575.6	1476	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	25.7371327074327	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGCTGCCTTTGCAAGG	-24186065	True	NA	NA	False	NA	NA	NA	24187261	24157098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_24157892_24159473_24159634_24161541_24161685_24169416_24169602_24180730_24180855_24187190
transcript_45950.known	chr12	+	916	6	FSM	ENSG00000139546.11	ENST00000552857.5	916	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	209.366664013161	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCTCTGTGGGTGCCATC	53501254	False	NA	NA	False	NA	NA	NA	53501273	53506229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_53501462_53503712_53503809_53504396_53504470_53504697_53504816_53505648_53505851_53505990
transcript_4596.known	chr1	-	674	4	FSM	ENSG00000185436.12	ENST00000374418.3	674	4	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	2.82842712474619	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGACCTACAGGAGGCCT	-24186052	True	NA	-11	True	AATAAA	-15	NA	24187248	24161377	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_24161685_24169416_24169602_24180730_24180855_24187190
transcript_45965.known	chr12	-	6660	12	FSM	ENSG00000170653.19	ENST00000420353.7	6660	12	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_8	47.4101150416708	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATGTCTGATGCTTCACT	-53623752	True	NA	0	True	ATTAAA	-18	NA	53626382	53512053	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_53517355_53523275_53523385_53524563_53524762_53531743_53531897_53532509_53532624_53533159_53533260_53534501_53534660_53537414_53537553_53543329_53543449_53552540_53552638_53600952_53601022_53626278
transcript_45968.known	chr12	-	774	4	FSM	ENSG00000170653.19	ENST00000548118.6	774	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	64.3583716388164	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGTTTCAATATATGT	-53625979	False	2630	-2	True	AATAAA	-21	NA	53625996	53542886	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_53543449_53552540_53552638_53600952_53601022_53625950
transcript_45969.known	chr12	-	860	4	FSM	ENSG00000170653.19	ENST00000591397.1	860	4	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_3	1.69967317119759	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGTTTCAATATATGT	-53623780	True	NA	-2	True	AATAAA	-21	NA	53626410	53542886	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_53543449_53552540_53552638_53600952_53601022_53626278
transcript_4597.nnic	chr1	+	3627	3	Antisense	novelGene_ENSG00000185436.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	25	junction_2	1.5	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGATTTACCTGTCTCTTT	24151163	True	NA	5	True	ATTAAA	-2	NA	24151492	24160453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr1_+_24151740_24155011_24155193_24157254
transcript_45970.known	chr12	-	379	2	FSM	ENSG00000170653.19	ENST00000589726.1	379	2	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTATTCTACTGGTGTTT	-53623757	True	NA	NA	False	AATGAA	-23	NA	53626387	53600751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_53601022_53626278
transcript_45974.known	chr12	-	632	5	FSM	ENSG00000135390.21	ENST00000394349.9	632	5	0	0	0	0	multi-exon	FALSE	canonical	3	4034	junction_4	804.124368490347	1259	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTGAGTCTCCTGTG	-53590281	True	NA	-9	True	AATAAA	-17	NA	53676083	53665169	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_53665429_53669147_53669342_53669870_53669949_53672575_53672646_53676052
transcript_45978.known	chr12	-	5576	15	FSM	ENSG00000012822.16	ENST00000550804.6	5576	15	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	12.6491106406735	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGCCATGTGTTGCTT	-53726492	True	NA	NA	False	AATAAA	-20	NA	53727452	53708516	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_53712122_53713099_53713207_53713700_53713901_53714132_53714242_53714597_53714694_53715199_53715326_53715792_53716048_53716259_53716416_53719738_53719830_53721466_53721616_53722024_53722184_53723592_53723784_53724644_53724748_53725086_53725267_53727403
transcript_45982.known	chr12	-	3888	14	FSM	ENSG00000012822.16	ENST00000548263.5	3888	14	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_13	10.5790906869784	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCTTTGTAGTTTGAACA	-53726468	True	NA	-54	True	AATAAA	-19	NA	53727428	53711158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_53713207_53713700_53713901_53714132_53714242_53714597_53714694_53715199_53715326_53715792_53716048_53716259_53716416_53719738_53719830_53721466_53721616_53722024_53722184_53723592_53723784_53724644_53724748_53725086_53725267_53727403
transcript_45985.nic	chr12	-	4184	13	NIC	ENSG00000012822.16	novel	3888	14	NA	NA	-1	0	intron_retention	FALSE	canonical	3	84	junction_12	10.9958956989516	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCTTTGTAGTTTGAACA	-53726532	False	NA	-54	True	AATAAA	-19	NA	53727492	53711158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_53713207_53713700_53714242_53714597_53714694_53715199_53715326_53715792_53716048_53716259_53716416_53719738_53719830_53721466_53721616_53722024_53722184_53723592_53723784_53724644_53724748_53725086_53725267_53727403
transcript_45997.known	chr12	-	2119	6	FSM	ENSG00000123415.16	ENST00000513838.5	2119	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	88.6476170012483	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAGACTCTAAATCCTT	-54187243	True	NA	-1	True	AATAAA	-29	NA	54188957	54180357	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_54181648_54182503_54182624_54183655_54183960_54187818_54187906_54188510_54188597_54188725
transcript_46.known	ERCC-00126	+	1111	1	FSM	ERCC-00126A	DQ459427	1111	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1111	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00126_+_0_1100
transcript_46004.known	chr12	-	926	5	FSM	ENSG00000123415.16	ENST00000514685.5	926	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	85.9051075315083	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGATGCCTACCTTATGG	-54187226	True	NA	-16	True	AATAAA	-34	NA	54188940	54181452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_54181648_54182503_54182624_54183655_54183960_54187818_54187906_54188720
transcript_46007.nic	chr12	-	753	5	NIC	ENSG00000123415.16	novel	926	5	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_4	69.3072867741914	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGATGCCTACCTTATGG	-54187283	True	NA	-16	True	AATAAA	-34	NA	54188997	54181452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_54181648_54182503_54182624_54183655_54183960_54187818_54187906_54188950
transcript_4601.known	chr1	+	2834	16	FSM	ENSG00000158055.17	ENST00000361548.9	2834	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	2.67830792354676	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCACATGCTGCTCTCGTT	24319282	True	NA	NA	False	AATAAA	-28	NA	24319356	24355318	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_24319569_24331425_24331613_24334644_24334707_24336481_24336828_24337077_24337152_24337635_24337790_24337991_24338104_24339667_24339763_24342114_24342274_24342693_24342773_24342891_24343026_24344896_24344932_24346552_24346642_24347467_24347554_24350057_24350123_24354373
transcript_46014.known	chr12	-	1571	4	FSM	ENSG00000123415.16	ENST00000337581.7	1571	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	79.1243746684084	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCATCTGTAAAACAGGG	-54187260	True	NA	-31	True	AATAAA	-19	NA	54188974	54181467	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_54182624_54183655_54183960_54187818_54187906_54188950
transcript_46016.known	chr12	-	627	4	FSM	ENSG00000123415.16	ENST00000243112.9	627	4	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	66.1362230551458	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTCCTCATCTGTAAAACA	-54187262	True	NA	-34	True	AATAAA	-16	NA	54188976	54181470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_54181648_54182503_54182624_54183655_54183960_54188950
transcript_46021.known	chr12	-	1697	3	FSM	ENSG00000123415.16	ENST00000508394.6	1697	3	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	81	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGAGAGAGTCTGGGCTT	-54187280	True	NA	NA	False	NA	NA	NA	54188994	54181274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_54182624_54183655_54183960_54188950
transcript_46023.known	chr12	+	1369	2	FSM	ENSG00000250742.5	ENST00000508564.1	1369	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGTTCGGAGTCAGCTG	54126033	False	NA	NA	False	AATAAA	-16	NA	54126097	54132843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_54126613_54131989
transcript_46027.known	chr12	+	3744	11	FSM	ENSG00000135486.19	ENST00000340913.11	3744	11	0	0	0	0	multi-exon	FALSE	canonical	3	1825	junction_7	5175.37763742898	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGCTTGTTTTGTCCTC	54066798	True	NA	39	True	AATAAA	-15	NA	54280725	54287087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282666_54282799_54282875_54283078_54283235_54283811_54283968_54284257_54284318_54284548
transcript_46030.known	chr12	+	1234	11	FSM	ENSG00000135486.19	ENST00000547566.5	1234	11	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_9	5569.26139088479	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGCTTGTTTTGTCCTCC	54066820	True	NA	40	True	AATAAA	-16	NA	54280747	54287088	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282666_54282799_54282875_54283811_54283968_54284257_54284318_54286661_54286733_54286952
transcript_46035.known	chr12	+	2793	10	FSM	ENSG00000135486.19	ENST00000677210.1	2793	10	0	0	0	0	multi-exon	FALSE	canonical	3	1825	junction_7	5290.21785824122	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGGAAGTTTGGGGAG	54280641	False	NA	139	True	NA	NA	NA	54280662	54285842	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282666_54282799_54282875_54283078_54283235_54283811_54283968_54284257
transcript_46037.known	chr12	+	2278	10	FSM	ENSG00000135486.19	ENST00000677249.1	2278	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	4724.11971811798	1205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCTTACCTTTGGTGCT	54280669	False	NA	42	True	NA	NA	NA	54280690	54285745	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282663_54282799_54282875_54283811_54283968_54284257_54284318_54284548
transcript_4604.known	chr1	+	1676	12	FSM	ENSG00000001461.17	ENST00000339255.2	1676	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	23.9444950453169	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAAAG	24414802	True	NA	-22	True	ATTAAA	-1	NA	24415813	24466310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_24415905_24419290_24419641_24440171_24440241_24442054_24442227_24445184_24445245_24449480_24449627_24453407_24453505_24456137_24456274_24458887_24458977_24460480_24460545_24464025_24464121_24466003
transcript_46044.known	chr12	+	2596	9	FSM	ENSG00000135486.19	ENST00000550482.2	2596	9	0	0	0	0	multi-exon	FALSE	canonical	3	11777	junction_7	1566.82042186557	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGGAAGTTTGGGGAG	54066776	True	NA	139	True	NA	NA	NA	54280703	54285842	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282666_54282799_54282875_54283811_54283968_54284257
transcript_46049.known	chr12	+	1232	9	FSM	ENSG00000111481.10	ENST00000549043.5	1232	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	466.429104339556	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAAGGGACAACATGGAAG	54315378	True	NA	NA	False	NA	NA	NA	54325128	54351102	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_54325182_54340462_54340616_54342205_54342288_54343224_54343317_54345459_54345516_54347766_54347845_54347999_54348052_54349619_54349659_54350475
transcript_46052.known	chr12	+	778	9	FSM	ENSG00000111481.10	ENST00000548753.1	778	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	467.409082068374	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCTATTCTTTTTCATT	54315833	False	NA	NA	False	NA	NA	NA	54325583	54350686	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_54325683_54340546_54340616_54342205_54342288_54343224_54343317_54345459_54345516_54347766_54347845_54347999_54348052_54349619_54349659_54350475
transcript_46059.known	chr12	+	551	8	FSM	ENSG00000111481.10	ENST00000553231.5	551	8	0	0	0	0	multi-exon	FALSE	canonical	1	17	junction_7	567.850943362385	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTATTCTCCATTCTT	54315388	True	NA	NA	False	NA	NA	NA	54325138	54350354	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_54325182_54342205_54342288_54343224_54343317_54345459_54345516_54347766_54347845_54347999_54348052_54349619_54349659_54350245
transcript_4606.known	chr1	+	5372	12	FSM	ENSG00000001461.17	ENST00000374399.9	5372	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	23.0271130167092	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGAGTTCGTGTCTTAT	24414790	True	NA	4	True	ATTAAA	-15	NA	24415801	24472976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_24415905_24419290_24419641_24440171_24440241_24442054_24442227_24445184_24445245_24449480_24449627_24453407_24453505_24456137_24456274_24458887_24458977_24460480_24460545_24464025_24464121_24468985
transcript_46060.known	chr12	+	880	8	FSM	ENSG00000111481.10	ENST00000455864.6	880	8	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	422.387577120969	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCATCCCAACAGCCCAG	54315388	True	NA	50	True	NA	NA	NA	54325138	54350913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_54325182_54342205_54342288_54343224_54343317_54345459_54345516_54347766_54347845_54347999_54348052_54349619_54349659_54350475
transcript_46083.known	chr12	-	894	5	FSM	ENSG00000094916.16	ENST00000550411.5	894	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	189.577161071686	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGGGGATGGTCTCTGTC	-54251981	True	NA	NA	False	AAGAAA	-15	NA	54259545	54241754	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_54241906_54246114_54246216_54252040_54252228_54257513_54257693_54259269
transcript_46084.known	chr12	-	1832	5	FSM	ENSG00000094916.16	ENST00000439541.6	1832	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	171.844951918874	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGATTTACCACCAAGAGT	-54252028	True	NA	NA	False	NA	NA	NA	54259592	54240624	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_54241906_54246114_54246216_54252040_54252228_54257513_54257693_54259508
transcript_46085.known	chr12	-	11546	5	FSM	ENSG00000094916.16	ENST00000209875.9	11546	5	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_4	41.3702791868752	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGAGTGGTGGTTTAA	-54239718	True	NA	-7	True	AATAAA	-20	NA	54280122	54230941	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_54241906_54246114_54246216_54252040_54252228_54257513_54257693_54280007
transcript_46105.nic	chr12	-	433	3	ISM	ENSG00000094916.16	ENST00000209875.9	11546	5	-70	21217	-59	-68	5prime_fragment	FALSE	canonical	3	354	junction_2	53	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATAAGAAGATGAAGGAGG	-54280181	False	NA	-13	True	NA	NA	NA	54280192	54252158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_54252228_54257513_54257693_54280007
transcript_46107.known	chr12	-	1656	3	FSM	ENSG00000123405.14	ENST00000435572.7	1656	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	3.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTTTCACTGTGTCTTC	-54300759	True	NA	-5	True	TATAAA	-15	NA	54301015	54292110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_54293382_54295134_54295305_54300800
transcript_46108.known	chr12	-	2627	2	FSM	ENSG00000094916.16	ENST00000618078.1	2627	2	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGATTATTAAACATTTTT	-54239729	True	NA	NA	False	AATAAA	-29	NA	54280133	54271840	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_54274342_54280007
transcript_4611.known	chr1	-	6016	10	FSM	ENSG00000001460.18	ENST00000468303.5	6016	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	27.2849617152465	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGAGCTTTTGGGTACCC	NA	False	NA	-7	True	ATTAAA	-16	NA	24416934	24357004	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_24358620_24360850_24361042_24369673_24369840_24373701_24373811_24379652_24379824_24383901_24384004_24391560_24391680_24391923_24392068_24401318_24401457_24413673
transcript_46110.known	chr12	+	1294	10	FSM	ENSG00000135486.19	ENST00000330752.12	1294	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	4723.82208977037	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTGTGTAAAGTTAGTC	54066847	True	NA	23	True	AATAAA	-15	NA	54280774	54284881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282670_54282842_54282875_54283811_54283968_54284257_54284318_54284548
transcript_46111.known	chr12	+	925	2	FSM	ENSG00000135486.19	ENST00000551665.1	925	2	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTTTTTTTTTTTAATA	54285779	False	NA	3	True	NA	NA	NA	54285906	54287051	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_54286733_54286952
transcript_46112.known	chr12	+	1890	9	FSM	ENSG00000111481.10	ENST00000262061.7	1890	9	0	0	0	0	multi-exon	FALSE	canonical	3	746	junction_1	227.003166277477	825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTTGTGTGATGTTTC	54315380	True	NA	14	True	AATAAA	-15	NA	54325130	54351846	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_54325182_54340546_54340616_54342205_54342288_54343224_54343317_54345459_54345516_54347766_54347845_54347999_54348052_54349619_54349659_54350475
transcript_46113.known	chr12	-	2331	8	FSM	ENSG00000161642.18	ENST00000338010.9	2331	8	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_7	17.8142341619142	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGCCCCTAGACTCAGAC	-54390179	True	NA	-12	True	AATAAA	-19	NA	54391298	54369139	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_54370487_54370625_54370722_54370926_54371097_54371472_54371716_54373972_54374136_54375843_54375955_54384427_54384565_54391234
transcript_46114.known	chr12	-	1516	7	FSM	ENSG00000161642.18	ENST00000552382.5	1516	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	29.448637018073	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTTGGCAATAAGCGGA	-54379012	False	177	NA	False	NA	NA	NA	54379189	54369877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_54370487_54370625_54370722_54370926_54371097_54371472_54371716_54373972_54374136_54375843_54375955_54379065
transcript_46115.known	chr12	-	4250	30	FSM	ENSG00000161638.11	ENST00000293379.9	4250	30	0	0	0	0	multi-exon	TRUE	canonical	3	85	junction_20	9.96056433415972	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGATCTCATGTTACTC	-54417017	True	NA	0	True	AATAAA	-35	NA	54419266	54395260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_54396377_54397364_54397488_54398596_54398699_54399644_54399759_54399863_54399948_54400845_54400996_54401372_54401479_54401584_54401666_54401775_54401856_54402000_54402094_54402179_54402331_54402982_54403051_54403186_54403325_54403624_54403780_54403910_54403967_54404144_54404247_54404429_54404476_54404702_54404895_54405165_54405375_54405663_54405717_54405869_54405927_54407648_54407693_54407831_54407877_54408109_54408236_54408755_54408802_54408892_54408955_54409231_54409353_54409484_54409598_54411833_54411965_54418980
transcript_46124.known	chr12	-	807	9	FSM	ENSG00000170627.11	ENST00000305879.8	807	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	2.28787565221539	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAATAGTTTGGTCAAGTA	-54473530	True	NA	-5	True	AATAAA	-17	NA	54473602	54455956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_54456154_54459088_54459126_54460376_54460472_54462108_54462173_54462641_54462726_54463170_54463298_54465066_54465168_54471232_54471278_54473545
transcript_46125.known	chr12	+	3193	16	FSM	ENSG00000123360.12	ENST00000243052.8	3193	16	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_11	3.11982905514602	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACTGTGTGTGTTCACT	54549414	True	NA	4	True	AATAAA	-15	NA	54549600	54579239	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_54549773_54549859_54549986_54566973_54567088_54569183_54569367_54569545_54569613_54570240_54570358_54572600_54572742_54573147_54573249_54573354_54573481_54573607_54573710_54575097_54575219_54575550_54575633_54575991_54576101_54576570_54576702_54577224_54577346_54577859
transcript_46126.known	chr12	-	1828	7	FSM	ENSG00000135447.17	ENST00000257905.13	1828	7	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_2	27.0025718939676	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGGCCTGGTCTCCCTTC	-54586659	True	NA	-13	True	NA	NA	NA	54588659	54579245	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_54580393_54580943_54581051_54581975_54582132_54582731_54582796_54583210_54583249_54584259_54584321_54588404
transcript_46130.nic	chr12	-	688	6	NIC	ENSG00000135447.17	novel	1828	7	NA	NA	-29	-4	combination_of_known_junctions	FALSE	canonical	3	41	junction_2	94.8527279523367	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCACTTTCCTTCTTTT	NA	False	NA	-12	True	GATAAA	-15	NA	54588688	54580258	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_54580393_54580943_54581051_54582731_54582796_54583210_54583249_54584259_54584321_54588404
transcript_46136.nnic	chr12	-	5254	3	Genic_Genomic	ENSG00000179899.8	novel	3061	1	NA	NA	-341	2053	multi-exon	FALSE	non_canonical	1	106	junction_1	1426.5	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTCAACATCACTGGAGAA	NA	False	NA	NA	False	AAAAAG	-7	NA	55415128	55409673	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Genic_Genomic_chr12_-_55414281_55414430_55414512_55414562
transcript_4614.known	chr1	-	2726	9	FSM	ENSG00000001460.18	ENST00000337248.9	2726	9	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	15.6199991997439	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGGGTACCCCTTAAT	-24412851	True	NA	-1	True	ATTAAA	-22	NA	24413782	24356998	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_24358620_24360850_24361042_24369673_24369840_24373701_24373811_24379652_24379824_24383901_24384004_24391560_24391680_24401318_24401457_24413673
transcript_46140.nnic	chr12	-	5231	3	Genic_Genomic	ENSG00000179899.8	novel	3061	1	NA	NA	-341	2036	multi-exon	FALSE	non_canonical	0	0	junction_1	1479.5	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAAAAATGC	NA	False	NA	NA	False	ATTAAA	-43	NA	55415128	55409690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Genic_Genomic_chr12_-_55414125_55414280_55414512_55414562
transcript_46142.nnic	chr12	-	4266	3	Genic_Genomic	ENSG00000179899.8	novel	3061	1	NA	NA	-341	2031	multi-exon	TRUE	canonical	3	763	junction_1	1098	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	ATTAAA	-38	NA	55415128	55409695	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Genic_Genomic_chr12_-_55410605_55411720_55414512_55414562
transcript_46153.known	chr12	-	4084	25	FSM	ENSG00000135424.19	ENST00000347027.10	4084	25	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_14	24.5785306043032	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCTCTGCCTCTTTGAG	-55707616	True	NA	NA	False	ATTAAA	-15	NA	55707884	55684571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55685289_55687970_55688097_55688201_55688301_55688843_55688958_55692843_55692976_55693140_55693318_55694020_55694124_55694255_55694331_55694442_55694523_55694614_55694696_55694777_55694971_55695521_55695638_55696282_55696433_55696898_55697051_55697215_55697278_55697450_55697547_55697694_55697823_55697937_55698027_55698382_55698577_55698709_55698918_55699869_55699990_55700898_55701155_55702871_55702952_55703050_55703179_55707476
transcript_46155.known	chr12	-	4138	25	FSM	ENSG00000135424.19	ENST00000553804.6	4138	25	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_20	24.2051417861761	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGCCTCTTTGAGTCTT	-55707636	True	NA	NA	False	ATTAAA	-19	NA	55707904	55684567	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55685289_55687970_55688097_55688201_55688301_55688843_55688958_55692843_55692976_55693140_55693318_55694020_55694124_55694255_55694331_55694442_55694523_55694614_55694696_55694777_55694971_55695521_55695638_55696282_55696433_55696898_55697069_55697215_55697278_55697450_55697547_55697694_55697823_55697937_55698027_55698382_55698577_55698709_55698918_55700261_55700394_55700898_55701155_55702871_55702952_55703050_55703179_55707476
transcript_4617.known	chr1	-	2544	8	FSM	ENSG00000001460.18	ENST00000003583.12	2544	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_6	17.7913072101208	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGAGCTTTTGGGTACCC	-24412794	True	NA	-7	True	ATTAAA	-16	NA	24413725	24357004	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_24358620_24360850_24361042_24369673_24369840_24373701_24373811_24379652_24379824_24383901_24384004_24401318_24401457_24413673
transcript_46175.known	chr12	+	571	4	FSM	ENSG00000135441.8	ENST00000548925.6	562	4	-9	0	-1	0	multi-exon	FALSE	canonical	3	867	junction_1	143.327906874024	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGGTGTGTTTCAGA	55716022	False	NA	8	True	AATAAA	-16	NA	55716036	55719703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55716197_55716932_55717006_55719090_55719224_55719498
transcript_46176.known	chr12	+	3382	4	FSM	ENSG00000258311.5	ENST00000550412.5	3382	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	493.073580265213	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCTGACCCCATTTAAGT	55716021	False	NA	5	True	AATAAA	-30	NA	55716035	55724703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55716197_55716932_55717006_55719090_55719224_55721688
transcript_46178.known	chr12	+	837	4	FSM	ENSG00000135441.8	ENST00000547076.5	837	4	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_1	404.320280086083	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGGTGTGTTTCAGA	55716180	False	NA	8	True	AATAAA	-16	NA	55716291	55719703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55716718_55716932_55717006_55719090_55719224_55719498
transcript_46179.known	chr12	+	1229	3	FSM	ENSG00000135441.8	ENST00000549147.1	1229	3	0	0	0	0	multi-exon	FALSE	canonical	3	867	junction_1	157	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTCCTGGGGGCACTTCA	55716023	False	NA	NA	False	NA	NA	NA	55716037	55720087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55716197_55716932_55717006_55719090
transcript_46181.known	chr12	+	421	3	FSM	ENSG00000135441.8	ENST00000553100.1	421	3	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_1	567.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACAAGCCTTGAATAAAAC	55708393	True	NA	-25	True	NA	NA	NA	55716080	55719670	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55716197_55719090_55719224_55719498
transcript_46182.known	chr12	+	531	3	FSM	ENSG00000135441.8	ENST00000551926.1	531	3	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_1	434	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCAGTGTCAGAAAAGGTA	55714109	True	NA	NA	False	NA	NA	NA	55716512	55719343	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55716718_55716932_55717006_55719090
transcript_46184.known	chr12	+	525	3	FSM	ENSG00000135441.8	ENST00000548556.1	525	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	537.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGGTGTGTTTCAGA	55714127	True	NA	8	True	AATAAA	-16	NA	55716530	55719703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55716718_55719090_55719224_55719498
transcript_46185.known	chr12	+	367	3	FSM	ENSG00000258311.5	ENST00000549424.1	367	3	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	35.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATCGGGGTCACCCTTG	55714186	False	NA	NA	False	NA	NA	NA	55716589	55721794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55716718_55719090_55719224_55721688
transcript_46186.known	chr12	+	1316	2	FSM	ENSG00000170439.8	ENST00000394252.4	1316	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTAGACTGATGGCAGCA	55681529	True	NA	7	True	AATAAA	-18	NA	55681735	55684611	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55682253_55683812
transcript_46189.known	chr12	+	1368	3	NNC	ENSG00000170439.8	novel	1316	2	NA	NA	-58	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	9.5	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCACTAGACTGATGGCA	55681471	True	NA	4	True	AATAAA	-15	NA	55681677	55684608	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_55682253_55683812_55684047_55684049
transcript_4619.nnic	chr1	-	2511	7	NIC	ENSG00000001460.18	novel	2726	9	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_5	24.7184141886165	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGGGTACCCCTTAAT	-24412857	True	NA	-1	True	ATTAAA	-22	NA	24413788	24356998	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_24358620_24360850_24361042_24369673_24369840_24373701_24373811_24379652_24379824_24401318_24401457_24413673
transcript_46193.known	chr12	-	981	8	FSM	ENSG00000135404.12	ENST00000420846.7	981	8	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_7	1010.90714969582	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTGATTCCTTCCTTTC	-55728611	False	NA	-2	True	NA	NA	NA	55728650	55725442	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55725627_55725812_55725897_55726120_55726262_55726699_55726796_55726889_55726965_55727150_55727340_55728275_55728353_55728515
transcript_46195.known	chr12	-	1023	8	FSM	ENSG00000135404.12	ENST00000257857.9	1023	8	0	0	0	0	multi-exon	FALSE	canonical	3	2649	junction_7	164.624619380342	2042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCAGGCAGTGGGAGAAG	-55691958	True	NA	NA	False	NA	NA	NA	55729009	55725322	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55725627_55725812_55725897_55726120_55726262_55726699_55726796_55726889_55726965_55727150_55727340_55728275_55728353_55728952
transcript_46196.known	chr12	-	1233	8	FSM	ENSG00000135404.12	ENST00000549117.5	1233	8	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_7	990.426129687291	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGACCGAAAAGAGATGGT	NA	False	NA	-41	True	ATTAAA	-13	NA	55729707	55725481	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55725627_55725812_55725897_55726120_55726262_55726699_55726796_55726889_55726965_55727150_55727340_55728275_55728353_55729281
transcript_462.known	chr1	-	1256	8	FSM	ENSG00000160087.21	ENST00000464036.5	1256	8	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_4	233.872632352025	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGGCTTTGGAGGAGAC	-1264101	True	NA	NA	False	TTTAAA	-34	NA	1273864	1255047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1255488_1256044_1256126_1256991_1257131_1257207_1257311_1262268_1262391_1263345_1263387_1267861_1267993_1273665
transcript_46207.known	chr12	+	1443	2	FSM	ENSG00000258056.3	ENST00000552576.3	1458	2	10	5	10	-5	multi-exon	FALSE	canonical	3	16	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTAGTTTTTCCTCTTTTT	55728655	True	NA	19	True	NA	NA	NA	55729103	55730852	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55729356_55729661
transcript_46210.known	chr12	-	949	7	FSM	ENSG00000135404.12	ENST00000552692.5	949	7	0	0	0	0	multi-exon	FALSE	canonical	3	2791	junction_3	136.235906508608	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGGTCTGAGTTTGTCT	-55728443	False	NA	-29	True	ATTAAA	-25	NA	55728482	55725469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55725627_55725812_55725897_55726120_55726262_55726699_55726796_55726889_55726965_55727150_55727340_55728275
transcript_46211.known	chr12	-	829	8	FSM	ENSG00000135404.12	ENST00000550050.5	829	8	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	1036.50992099764	1635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTCAATTAAACGGATTA	-55691949	True	NA	-66	True	NA	NA	NA	55729000	55725506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55725627_55725812_55725897_55726120_55726262_55726699_55726796_55726889_55726964_55727150_55727340_55728275_55728353_55728952
transcript_46214.known	chr12	-	1163	12	FSM	ENSG00000205323.9	ENST00000546604.5	1163	12	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	725.702475291788	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGGGGTAGGGAGGAACA	-55777624	True	NA	NA	False	NA	NA	NA	55817724	55752462	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55752841_55757382_55757554_55760550_55760641_55789074_55789144_55790566_55790593_55794358_55794388_55794806_55794881_55796024_55796077_55800561_55800630_55800853_55800901_55803628_55803729_55817665
transcript_46217.known	chr12	-	898	11	FSM	ENSG00000205323.9	ENST00000336133.8	898	11	0	0	0	0	multi-exon	FALSE	canonical	3	2338	junction_1	157.957715860923	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGTGTTTTATTAGGTGC	-55777624	True	NA	-11	True	AATAAA	-19	NA	55817724	55757269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55757554_55760550_55760641_55789074_55789144_55790566_55790593_55794358_55794388_55794806_55794881_55796024_55796077_55800561_55800630_55800853_55800901_55803628_55803729_55817665
transcript_46222.nnic	chr12	-	807	9	NIC	ENSG00000205323.9	novel	898	11	NA	NA	-9	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	885.977417531057	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAACAATGTGTTTTATTA	-55777633	True	NA	-16	True	AATAAA	-14	NA	55817733	55757274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_55757554_55760550_55760641_55794358_55794388_55794806_55794881_55796024_55796077_55800561_55800630_55800853_55800901_55803628_55803729_55817665
transcript_46228.known	chr12	-	2242	7	FSM	ENSG00000205323.9	ENST00000552207.1	2242	7	0	0	0	0	multi-exon	FALSE	canonical	3	2589	junction_4	99.037731305913	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAAGCTGGGTGTGGTGT	-55777620	True	NA	NA	False	AATACA	-15	NA	55817720	55792541	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55794388_55794806_55794881_55796024_55796077_55800561_55800630_55800853_55800901_55803628_55803729_55817665
transcript_46231.known	chr12	-	3618	7	FSM	ENSG00000135392.19	ENST00000546957.2	3618	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_6	74.4238984914568	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTATCTTCCCTCTTT	-55825708	True	NA	-31	True	TATAAA	-13	NA	55829603	55820986	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55822188_55822372_55822476_55822571_55822733_55823069_55823190_55823401_55823509_55827251_55828715_55829140
transcript_46232.known	chr12	-	3256	7	FSM	ENSG00000135392.19	ENST00000678005.2	3256	7	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_6	35.5933826558939	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTATCTTCCCTCTTTGT	-55825692	True	NA	-29	True	TATAAA	-15	NA	55829587	55820984	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55822188_55822372_55822476_55822571_55822733_55823069_55823190_55823401_55823509_55827251_55828715_55829488
transcript_46233.known	chr12	-	2774	7	FSM	ENSG00000135392.19	ENST00000317287.5	2774	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	87.7983801419796	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTAGCTGGGATTACAGG	-55830545	False	NA	NA	False	NA	NA	NA	55830558	55821750	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55822188_55822372_55822476_55822571_55822733_55823069_55823190_55823401_55823509_55827251_55828715_55830175
transcript_46234.known	chr12	-	3284	7	FSM	ENSG00000135392.19	ENST00000547445.2	3284	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	87.435214111173	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTATCTTCCCTCTTT	NA	False	NA	-31	True	TATAAA	-13	NA	55830824	55820986	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55822188_55822372_55822476_55822571_55822733_55823069_55823190_55823401_55823509_55827251_55828715_55830695
transcript_46244.known	chr12	+	2019	4	FSM	ENSG00000123353.10	ENST00000243045.10	2019	4	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_1	46.5403051128804	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTAGGTGTTGGGGGAG	55813072	True	NA	NA	False	AATAAA	-15	NA	55818040	55821879	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55818113_55818998_55819174_55819341_55819494_55820259
transcript_46246.known	chr12	+	760	4	FSM	ENSG00000123353.10	ENST00000552672.5	760	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	186.456429226777	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTTTTGCTGTGTATT	55813072	True	NA	20	True	NA	NA	NA	55818040	55820712	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55818113_55819090_55819174_55819341_55819494_55820259
transcript_4625.known	chr1	+	931	2	FSM	ENSG00000001461.17	ENST00000488155.1	931	2	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGGAGGCAGAGAAACACC	24414800	True	NA	NA	False	ATTAAA	-12	NA	24415811	24420128	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_24415905_24419290
transcript_46250.known	chr12	+	593	4	FSM	ENSG00000182796.15	ENST00000635938.1	593	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	16.9771087709958	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTGAGCCCACAGGACCT	55829936	True	NA	NA	False	NA	NA	NA	55830838	55835047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55831084_55832958_55833015_55833446_55833542_55834850
transcript_46251.known	chr12	+	575	4	FSM	ENSG00000182796.15	ENST00000637951.1	575	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	21.4165045389453	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTACCCCTGTGAGGGCC	55829938	True	NA	NA	False	NA	NA	NA	55830840	55835007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55831084_55832958_55833039_55833446_55833542_55834850
transcript_46254.known	chr12	+	2230	3	FSM	ENSG00000182796.15	ENST00000482378.6	2230	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	16	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGAGTCCAGCCTCTGC	55829930	True	NA	12	True	AATAAA	-19	NA	55830832	55836246	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55831084_55832958_55833542_55834850
transcript_46255.known	chr12	+	2313	4	FSM	ENSG00000182796.15	ENST00000508246.6	2313	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	10.9848380355227	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGGGAGTCCAGCCTCT	55829938	True	NA	10	True	AATAAA	-17	NA	55830840	55836244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55831084_55831256_55831350_55832958_55833542_55834850
transcript_46257.known	chr12	+	2727	24	FSM	ENSG00000065357.20	ENST00000331886.10	2727	24	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	10.796449742028	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGGTACACTTCCTTC	55930888	True	NA	26	True	AATAAA	-33	NA	55931161	55954023	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55931345_55936422_55936568_55937016_55937091_55937407_55937544_55937977_55938053_55938510_55938561_55938914_55938990_55939185_55939306_55939414_55939530_55940081_55940171_55940313_55940434_55940623_55940723_55940896_55940981_55941251_55941326_55941509_55941585_55941997_55942084_55942173_55942264_55951622_55951784_55952034_55952100_55952340_55952432_55952733_55952933_55953039_55953161_55953349_55953411_55953684
transcript_46259.known	chr12	+	2770	24	FSM	ENSG00000065357.20	ENST00000394147.5	2770	24	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	12.3599144747165	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAGTGGTACACTTCCT	55931754	False	NA	24	True	AATAAA	-31	NA	55932027	55954021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55932256_55936422_55936568_55937016_55937091_55937407_55937544_55937977_55938053_55938510_55938561_55938914_55938990_55939185_55939306_55939414_55939530_55940081_55940171_55940313_55940434_55940623_55940723_55940896_55940981_55941251_55941326_55941509_55941585_55941997_55942084_55942173_55942264_55951622_55951784_55952034_55952100_55952340_55952432_55952733_55952933_55953039_55953161_55953349_55953411_55953684
transcript_46269.known	chr12	-	1207	3	FSM	ENSG00000170473.17	ENST00000408946.7	1207	3	0	0	0	0	multi-exon	FALSE	canonical	3	783	junction_2	29.5	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTTGCCTCCTTATTTT	-55917645	True	NA	-2	True	AATAAA	-17	NA	55927894	55901412	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55902356_55903386_55903481_55927724
transcript_46271.known	chr12	-	884	3	FSM	ENSG00000170473.17	ENST00000454792.2	884	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTGTGAATAAATGTGATTA	-55917626	True	NA	NA	False	AATAAA	-14	NA	55927875	55913825	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55914367_55927075_55927268_55927724
transcript_46272.known	chr12	-	653	2	FSM	ENSG00000170473.17	ENST00000549939.1	653	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGTGTCACTGTTTTG	-55927744	False	NA	NA	False	ATTAAA	-1	NA	55927756	55913745	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55914367_55927724
transcript_46274.known	chr12	-	1073	3	FSM	ENSG00000170473.17	ENST00000398213.4	1073	3	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_2	353.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTTTGCCTCCTTATTT	-55927100	False	10249	-3	True	AATAAA	-16	NA	55927112	55901413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55902356_55903386_55903481_55927075
transcript_46277.known	chr12	+	2240	7	FSM	ENSG00000123374.11	ENST00000266970.9	2240	7	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_3	29.2498812913071	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTCCTCCTCTTATTT	55959775	True	NA	23	True	ATTAAA	-26	NA	55966829	55972789	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55967125_55967856_55967935_55968048_55968170_55968777_55968949_55969474_55969577_55971043_55971248_55971520
transcript_4628.known	chr1	+	2421	5	FSM	ENSG00000117602.13	ENST00000538532.6	2421	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	34.1357583773966	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATACCCCTAATTTTTTT	24502086	True	NA	NA	False	NA	NA	NA	24502350	24536800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_24502464_24514313_24514568_24531217_24531392_24533082_24533255_24535092
transcript_46281.known	chr12	+	1260	6	FSM	ENSG00000123374.11	ENST00000354056.4	1260	6	0	0	0	0	multi-exon	FALSE	canonical	2	29	junction_4	138.260623461635	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCTACACGTTAGATT	55959776	True	NA	NA	False	TATAAA	-16	NA	55966830	55971912	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55967125_55967856_55967935_55968048_55968170_55968777_55968949_55971043_55971248_55971520
transcript_46284.known	chr12	-	461	3	FSM	ENSG00000185664.15	ENST00000549413.1	461	3	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_2	30.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTCTCGCTCTGTCGCCC	-55965974	False	NA	NA	False	NA	NA	NA	55966021	55961199	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55961464_55961621_55961733_55965935
transcript_46285.known	chr12	-	2127	11	FSM	ENSG00000185664.15	ENST00000449260.6	2127	11	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	174.733511382333	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTTTTTCTGTTGCTT	-55965975	False	NA	-8	True	AATAAA	-15	NA	55966022	55954104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55954350_55955273_55955383_55955463_55955670_55955778_55955864_55956102_55956220_55956948_55957672_55957922_55958085_55958472_55958608_55961316_55961464_55961621_55961733_55965935
transcript_46286.known	chr12	-	2204	12	FSM	ENSG00000185664.15	ENST00000548493.5	2204	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	174.129713216307	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTGGTTTTTCTGTTGCT	NA	False	NA	-9	True	AATAAA	-14	NA	55966736	55954105	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_55954350_55955273_55955362_55955463_55955670_55955778_55955864_55956102_55956220_55956948_55957672_55957922_55958085_55958472_55958608_55961316_55961464_55961621_55961733_55965935_55966063_55966677
transcript_46291.known	chr12	+	3322	6	FSM	ENSG00000111540.16	ENST00000553116.5	3322	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	182.761702771669	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCATTGGAGTGTTGCTTT	55973898	False	NA	NA	False	AGTAAA	-19	NA	55973912	55994706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55974001_55986868_55987124_55989946_55990099_55990681_55990805_55991359_55991454_55992096
transcript_46292.known	chr12	+	5273	6	FSM	ENSG00000111540.16	ENST00000360299.10	5273	6	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_1	70.0097136117553	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGTTGTTTCATTTTTG	55971181	True	NA	13	True	AATAAA	-14	NA	55974077	55996683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55974140_55986868_55987124_55989946_55990099_55990681_55990805_55991359_55991454_55992096
transcript_46293.nnic	chr12	+	3461	6	NNC	ENSG00000111540.16	novel	5273	6	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	164.525256419797	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCATTGGAGTGTTGCTTT	55971216	True	NA	NA	False	AGTAAA	-19	NA	55974112	55994706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_55974340_55986868_55987124_55989946_55990099_55990681_55990805_55991359_55991454_55992096
transcript_46299.known	chr12	+	1530	5	FSM	ENSG00000111540.16	ENST00000448789.2	1530	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	177.568296719882	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCCATCCTCTGATTTAT	55971204	True	NA	NA	False	NA	NA	NA	55974100	55993086	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55974140_55986868_55987124_55989946_55990099_55991359_55991454_55992096
transcript_46300.known	chr12	+	3148	5	FSM	ENSG00000111540.16	ENST00000549505.5	3148	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	187.631787019151	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCATTGGAGTGTTGCTTT	55971177	True	NA	NA	False	AGTAAA	-19	NA	55974073	55994706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55974140_55986868_55987124_55990681_55990805_55991359_55991454_55992096
transcript_46306.known	chr12	+	2394	6	FSM	ENSG00000139531.13	ENST00000394115.6	2394	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	55.7544617048717	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTACTTTTCTAATAAAT	55995587	True	NA	-20	True	NA	NA	NA	55997287	56005486	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55997340_55997614_55997724_55999332_55999459_56002211_56002272_56002542_56002721_56003617
transcript_46307.nic	chr12	+	2625	6	NIC	ENSG00000139531.13	novel	2394	6	NA	NA	-31	0	intron_retention	FALSE	canonical	0	0	junction_3	63.3359297713391	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGGCCTGGGGAGTGA	55995527	True	NA	19	True	AATAAA	-21	NA	55997227	56005525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_55997340_55997614_55997724_55999332_55999591_56002211_56002272_56002542_56002721_56003617
transcript_4631.known	chr1	+	6863	5	FSM	ENSG00000117602.13	ENST00000374395.9	6863	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	10.7354552767919	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATTGAGTTGAGTTTTT	24502571	False	NA	8	True	AATAAA	-23	NA	24502835	24541040	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_24503151_24514313_24514568_24531217_24531392_24533082_24533255_24535092
transcript_46310.known	chr12	+	2319	5	FSM	ENSG00000139531.13	ENST00000266971.8	2319	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	49.1750699033565	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGGCCTGGGGAGTGA	55995575	True	NA	19	True	AATAAA	-21	NA	55997275	56005525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55997340_55997614_55997724_56002211_56002272_56002542_56002721_56003617
transcript_46311.known	chr12	+	613	5	FSM	ENSG00000139531.13	ENST00000550478.5	613	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	66.0014204392602	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCTGTACGTCACCCAGC	55995618	True	NA	NA	False	NA	NA	NA	55997318	56003923	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55997340_55997614_55997724_56002211_56002272_56002603_56002721_56003617
transcript_46313.known	chr12	+	543	5	FSM	ENSG00000139531.13	ENST00000552258.5	543	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	69.372184627558	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCAAAGCTGATGCTAGC	55995595	True	NA	NA	False	NA	NA	NA	55997295	56003752	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55997340_55999332_55999459_56002211_56002272_56002542_56002721_56003617
transcript_46314.known	chr12	+	2306	4	FSM	ENSG00000139531.13	ENST00000356124.8	2306	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	63.8974873440958	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGGCCTGGGGAGTGA	55997169	False	NA	19	True	AATAAA	-21	NA	55997179	56005525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_55997340_56002211_56002272_56002542_56002721_56003617
transcript_46322.known	chr12	+	3683	7	FSM	ENSG00000123411.15	ENST00000551103.5	3683	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	11.9117122568038	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAAAAAAGTAAAA	56020958	True	NA	NA	False	NA	NA	NA	56021047	56036904	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56021581_56025053_56025159_56026780_56027042_56027779_56027948_56032560_56032711_56033189_56033322_56034570
transcript_46324.known	chr12	+	623	5	FSM	ENSG00000197728.11	ENST00000552361.1	623	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7265.68000946918	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCATGTTAAGTGTATC	56041754	False	NA	17	True	AATAAA	-18	NA	56041892	56044223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56042065_56042132_56042170_56042424_56042603_56043362_56043494_56044118
transcript_46325.known	chr12	+	1140	4	FSM	ENSG00000197728.11	ENST00000646449.2	1140	4	0	0	0	0	multi-exon	FALSE	canonical	3	12994	junction_1	2794.30866027518	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTGTGTGAAATGGAGAT	56040100	True	NA	24	True	ATTAAA	-39	NA	56041917	56044697	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56042170_56042424_56042603_56043362_56043494_56044118
transcript_46326.known	chr12	+	1204	3	FSM	ENSG00000197728.11	ENST00000548590.1	1204	3	0	0	0	0	multi-exon	FALSE	canonical	3	12994	junction_1	925	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCATGTTAAGTGTATC	55782154	True	NA	17	True	AATAAA	-18	NA	56042139	56044223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56042170_56042424_56043494_56044118
transcript_46328.known	chr12	+	5439	28	FSM	ENSG00000065361.17	ENST00000683059.1	5439	28	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	31.6898550577349	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCAAAGTTTTTTTTCAG	56078858	True	NA	-4	True	AATAAA	-2	NA	56079873	56103486	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56079935_56083750_56083903_56084994_56085182_56086530_56086657_56087576_56087643_56087794_56087914_56088020_56088163_56088542_56088657_56088747_56088869_56092746_56092821_56092985_56093077_56093344_56093551_56093763_56093897_56094098_56094190_56094401_56094557_56095256_56095311_56095664_56095807_56096502_56096623_56096747_56096847_56097044_56097231_56097784_56097941_56098499_56098576_56098758_56098906_56099647_56099746_56099837_56100030_56100173_56100246_56101060_56101362_56101528
transcript_46329.known	chr12	+	5615	28	FSM	ENSG00000065361.17	ENST00000267101.8	5615	28	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_7	23.9102115577268	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCCTGTCTGTCAAATGA	56079091	True	NA	15	True	AATAAA	-21	NA	56080164	56103505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56080383_56083750_56083903_56084994_56085182_56086530_56086657_56087576_56087643_56087794_56087914_56088020_56088163_56088542_56088657_56088747_56088869_56092746_56092821_56092985_56093077_56093344_56093551_56093763_56093897_56094098_56094190_56094401_56094557_56095256_56095311_56095664_56095807_56096502_56096623_56096747_56096847_56097044_56097231_56097784_56097941_56098499_56098576_56098758_56098906_56099647_56099746_56099837_56100030_56100173_56100246_56101060_56101362_56101528
transcript_46332.known	chr12	+	5819	26	FSM	ENSG00000065361.17	ENST00000684500.1	5819	26	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_7	24.4567863792445	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	56079098	True	NA	NA	False	NA	NA	NA	56080171	56102804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56080383_56083750_56083903_56084994_56085182_56086530_56086657_56087576_56087643_56087794_56087914_56088020_56088163_56088542_56088657_56088747_56088869_56092746_56092821_56092985_56093077_56093344_56093551_56093763_56093897_56094098_56095311_56095664_56095807_56096502_56096623_56096747_56096847_56097044_56097231_56097784_56097941_56098499_56098576_56098758_56098906_56099647_56099746_56099837_56100030_56100173_56100246_56101060_56101362_56101528
transcript_46336.known	chr12	+	2386	13	FSM	ENSG00000170515.14	ENST00000303305.11	2386	13	0	0	0	0	multi-exon	FALSE	canonical	3	1583	junction_4	102.848965586545	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTTTGTATGCTGCTCT	56073534	True	NA	18	True	AATAAA	-21	NA	56104558	56113910	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56104826_56106587_56106717_56106989_56107096_56107186_56107257_56107520_56107614_56109229_56109294_56109856_56109936_56110398_56110478_56110558_56110693_56110963_56111059_56111181_56111310_56111475_56111530_56112822
transcript_46341.nic	chr12	+	1531	12	ISM	ENSG00000170515.14	ENST00000303305.11	2386	13	-253	2401	-231	0	5prime_fragment	FALSE	canonical	3	1583	junction_4	107.420545305444	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAGAAAAAAAAGAAG	56104252	True	NA	NA	False	NA	NA	NA	56104305	56111509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_56104826_56106587_56106717_56106989_56107096_56107186_56107257_56107520_56107614_56109229_56109294_56109856_56109936_56110398_56110478_56110558_56110693_56110963_56111059_56111181_56111310_56111475
transcript_46351.known	chr12	+	1027	3	FSM	ENSG00000065361.17	ENST00000411731.6	1027	3	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	3.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTGGTGCGCACCTGTA	56080011	False	NA	10	True	AATAAA	-23	NA	56080136	56085623	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56080383_56083750_56083903_56084994
transcript_46352.nic	chr12	+	610	2	ISM	ENSG00000170515.14	ENST00000552766.5	1085	10	-231	7230	-231	-542	5prime_fragment	FALSE	canonical	3	1597	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGGGAAAATCTTCAAGAAA	56104252	True	NA	NA	False	AAGAAA	-1	NA	56104305	56106677	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_56104826_56106587
transcript_46353.nic	chr12	+	428	2	ISM	ENSG00000170515.14	ENST00000552766.5	1085	10	4	7177	4	-489	5prime_fragment	FALSE	canonical	3	1597	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCACTAATTTTCCGTT	56073516	True	NA	NA	False	AAGAAA	-34	NA	56104540	56106730	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_56104826_56106587
transcript_46354.known	chr12	+	469	4	FSM	ENSG00000229117.9	ENST00000501597.3	469	4	0	0	0	0	multi-exon	FALSE	canonical	3	5168	junction_1	7443.74423406811	9070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTCTATTATGTTTTTT	56088164	True	NA	7	True	AATAAA	-38	NA	56116589	56117832	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56116660_56116774_56116800_56117188_56117212_56117481
transcript_46355.known	chr12	+	335	4	FSM	ENSG00000229117.9	ENST00000546485.5	335	4	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_2	9942.56822399972	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTGGTCCTCTGCCCTG	56088206	True	NA	NA	False	CATAAA	-10	NA	56116631	56117710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56116660_56116774_56116830_56117188_56117212_56117481
transcript_46356.nnic	chr12	+	536	4	NNC	ENSG00000229117.9	novel	469	4	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	10016.2713066734	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTCTATTATGTTTTTT	56088161	True	NA	7	True	AATAAA	-38	NA	56116586	56117832	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_56116660_56116774_56116864_56117188_56117212_56117481
transcript_46357.known	chr12	+	551	4	FSM	ENSG00000229117.9	ENST00000358888.7	551	4	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_2	9900.04488205315	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCATCTTGTCTATTATG	56088207	True	NA	1	True	AATAAA	-32	NA	56116632	56117826	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56116660_56116774_56116931_56117188_56117212_56117481
transcript_4636.nic	chr1	+	2814	5	NIC	ENSG00000117602.13	novel	6863	5	NA	NA	-5	0	intron_retention	FALSE	canonical	3	21	junction_1	26.4480623108764	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTGTGCCCATTTTTTA	24502566	False	NA	29	True	AATAAA	-23	NA	24502830	24537019	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_24503118_24514313_24514568_24531217_24531392_24533082_24533255_24535092
transcript_46360.nic	chr12	+	818	3	NIC	ENSG00000229117.9	novel	469	4	NA	NA	-2	0	intron_retention	FALSE	canonical	3	5168	junction_1	9093.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTCTATTATGTTTTTT	56088204	True	NA	7	True	AATAAA	-38	NA	56116629	56117832	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_56116660_56116774_56117212_56117481
transcript_46361.known	chr12	+	676	3	FSM	ENSG00000229117.9	ENST00000546591.6	676	3	0	0	0	0	multi-exon	FALSE	canonical	3	13136	junction_1	5109.5	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGCTGGAGTTGGATGGG	56088207	True	NA	31	True	TATAAA	-34	NA	56116632	56117967	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56116800_56117188_56117212_56117481
transcript_46363.known	chr12	+	3577	31	FSM	ENSG00000139641.13	ENST00000267113.4	3577	31	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_13	96.8266262737453	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTACTGCACGGCCTTTAT	56120091	True	NA	NA	False	NA	NA	NA	56128266	56144041	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56128710_56130581_56130624_56130790_56130926_56131039_56131114_56131243_56131317_56131476_56131567_56131748_56131805_56132208_56132333_56132420_56132598_56132718_56132802_56133416_56133466_56133587_56133675_56133780_56133874_56134079_56134182_56134341_56134429_56136743_56136894_56137217_56137374_56137498_56137676_56137831_56137915_56138025_56138075_56138182_56138273_56138403_56138500_56138767_56138840_56138926_56139014_56142284_56142426_56142577_56142733_56142834_56142934_56143016_56143149_56143227_56143334_56143579_56143630_56143822
transcript_46364.known	chr12	+	4180	31	FSM	ENSG00000139641.13	ENST00000394048.10	4180	31	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_18	51.1742665365665	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGTTCTTTTCCTTAA	56120091	True	NA	19	True	ATTAAA	-17	NA	56128266	56144674	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56128710_56130581_56130624_56130790_56130926_56131039_56131114_56131243_56131317_56131476_56131567_56131748_56131805_56132208_56132333_56132420_56132598_56132718_56132802_56133416_56133466_56133587_56133675_56133780_56133874_56134109_56134182_56134341_56134429_56136743_56136894_56137217_56137374_56137498_56137676_56137831_56137915_56138025_56138075_56138182_56138273_56138403_56138500_56138767_56138840_56138926_56139014_56142284_56142426_56142577_56142733_56142834_56142934_56143016_56143149_56143227_56143334_56143579_56143630_56143822
transcript_46372.known	chr12	+	7121	3	FSM	ENSG00000135482.7	ENST00000257940.7	7121	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	14	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTTTTTTTCCCCCTT	56116035	True	NA	NA	False	AATAAA	-18	NA	56118265	56127514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56118319_56119087_56119152_56120510
transcript_46373.known	chr12	+	552	3	FSM	ENSG00000135482.7	ENST00000552345.1	552	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	42	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGACTTCCAGAACAAGGA	56116029	True	NA	NA	False	NA	NA	NA	56118259	56120799	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56118319_56118947_56119152_56120510
transcript_46374.known	chr12	+	743	3	FSM	ENSG00000135482.7	ENST00000546903.1	743	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	39.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAATTGCCGTTTCATCC	56118396	False	NA	NA	False	NA	NA	NA	56118406	56120828	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56118768_56119087_56119152_56120510
transcript_46375.known	chr12	-	4271	30	FSM	ENSG00000139613.12	ENST00000394023.7	4271	30	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_13	84.922472862878	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGATGTCAGCGTATGTG	-56184074	True	NA	-10	True	TTTAAA	-13	NA	56189567	56162982	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56163766_56164302_56164369_56164647_56164732_56165317_56165700_56168059_56168195_56169528_56169696_56169775_56169912_56170143_56170209_56171270_56171433_56171678_56171938_56172427_56172491_56172584_56172705_56172936_56173030_56173695_56173850_56174650_56174765_56178021_56178094_56178403_56178535_56178809_56178848_56178996_56179057_56180976_56181102_56181481_56181598_56181703_56181836_56182003_56182080_56183860_56183931_56184174_56184245_56184843_56184937_56185029_56185112_56186154_56186241_56187186_56187307_56189350
transcript_46378.known	chr12	-	3730	29	FSM	ENSG00000139613.12	ENST00000552674.5	3730	29	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_26	103.330730162514	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGTA	-56183980	True	NA	NA	False	NA	NA	NA	56189473	56163344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56163766_56164647_56164732_56165317_56165700_56168059_56168195_56169528_56169696_56169775_56169912_56170143_56170209_56171270_56171433_56171678_56171938_56172427_56172491_56172584_56172705_56172936_56173030_56173695_56173850_56174650_56174765_56178021_56178094_56178403_56178535_56178809_56178848_56178996_56179057_56180976_56181102_56181481_56181598_56181703_56181836_56182003_56182080_56183860_56183931_56184174_56184245_56184843_56184937_56185029_56185093_56186154_56186241_56187186_56187307_56189350
transcript_46380.known	chr12	-	5090	29	FSM	ENSG00000139613.12	ENST00000550164.6	5090	29	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_12	75.7901489883314	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGGGTGCATTCTGTG	-56183990	True	NA	1	True	TATAAA	-21	NA	56189483	56162358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56163766_56164302_56164732_56165317_56165700_56168059_56168195_56169528_56169696_56169775_56169912_56170143_56170209_56171270_56171433_56171678_56171938_56172427_56172491_56172584_56172705_56172936_56173030_56173695_56173850_56174650_56174765_56178021_56178094_56178403_56178535_56178809_56178848_56178996_56179057_56180976_56181102_56181481_56181598_56181703_56181836_56182003_56182080_56183860_56183931_56184174_56184245_56184843_56184937_56185029_56185112_56186154_56186241_56187186_56187307_56189350
transcript_46382.known	chr12	-	4076	28	FSM	ENSG00000139613.12	ENST00000267064.8	4076	28	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_11	37.0302215951439	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGTA	-56184055	True	NA	NA	False	NA	NA	NA	56189548	56163344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56163766_56164302_56164732_56165317_56165700_56168059_56168195_56169528_56169696_56169775_56169912_56170143_56170209_56171270_56171433_56171678_56171938_56172427_56172491_56172584_56172705_56173695_56173850_56174650_56174765_56178021_56178094_56178403_56178535_56178809_56178848_56178996_56179057_56180976_56181102_56181481_56181598_56181703_56181836_56182003_56182080_56183860_56183931_56184174_56184245_56184843_56184937_56185029_56185112_56186154_56186241_56187186_56187307_56189350
transcript_464.known	chr1	-	1021	8	FSM	ENSG00000160087.21	ENST00000400930.8	1021	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	252.55971207472	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGAGGGCACCGCGCAC	-1264070	True	NA	NA	False	NA	NA	NA	1273833	1255177	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1255488_1256044_1256126_1256991_1257131_1257207_1257311_1263345_1263387_1264782_1264831_1267861_1267993_1273665
transcript_46403.known	chr12	+	1034	8	FSM	ENSG00000196465.10	ENST00000550443.5	1034	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	220.967630836625	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTTCAGACTGCTAT	NA	False	NA	18	True	AATAAA	-14	NA	56152438	56157976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56152632_56153808_56154093_56154812_56154841_56155054_56155199_56155418_56155593_56157467_56157546_56157697_56157736_56157881
transcript_46408.known	chr12	+	703	8	FSM	ENSG00000196465.10	ENST00000552568.5	703	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	229.630404016932	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTTCAGACTGCTAT	56145647	True	NA	18	True	AATAAA	-14	NA	56152606	56157976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56152632_56153872_56154093_56154812_56154841_56155054_56155199_56155418_56155494_56157467_56157546_56157697_56157736_56157881
transcript_46409.known	chr12	+	322	3	FSM	ENSG00000196465.10	ENST00000550550.5	322	3	0	0	0	0	multi-exon	FALSE	canonical	3	578	junction_2	69.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTTCAGACTGCTAT	56157333	False	NA	18	True	AATAAA	-14	NA	56157356	56157976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56157546_56157697_56157736_56157881
transcript_46410.known	chr12	+	528	5	FSM	ENSG00000092841.19	ENST00000548580.5	528	5	0	0	0	0	multi-exon	FALSE	canonical	3	780	junction_2	4410.98024819881	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCGGTTCGGTTCTTTCTT	56099285	True	NA	27	True	AATAAA	-15	NA	56158345	56161575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56158405_56158683_56158712_56159974_56160149_56160242_56160321_56161386
transcript_46411.known	chr12	+	655	6	FSM	ENSG00000092841.19	ENST00000547649.5	655	6	0	0	0	0	multi-exon	FALSE	canonical	3	9526	junction_1	742.875601968459	3452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCGGTTCGGTTCTTTCT	56099301	True	NA	26	True	AATAAA	-14	NA	56158361	56161574	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56158405_56158683_56158712_56159586_56159731_56159974_56160149_56160242_56160321_56161386
transcript_46412.known	chr12	+	708	7	FSM	ENSG00000092841.19	ENST00000550697.6	708	7	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_5	4951.44192522632	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCGGTTCTTTCTTTCCT	56099298	True	NA	31	True	AATAAA	-19	NA	56158358	56161579	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56158405_56158683_56158712_56159586_56159731_56159974_56160149_56160242_56160321_56160625_56160671_56161386
transcript_46413.known	chr12	+	502	6	FSM	ENSG00000092841.19	ENST00000549017.5	502	6	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_3	4304.06126350451	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCGGTTCGGTTCTTTCT	56099296	True	NA	26	True	AATAAA	-14	NA	56158356	56161574	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56158405_56158683_56158712_56159586_56159623_56160024_56160149_56160242_56160321_56161386
transcript_46418.nic	chr12	-	3455	8	NIC	ENSG00000181852.18	novel	2452	8	NA	NA	-26	949	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	58.4158211725668	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCAGCATTACTCCCTT	-56217794	True	NA	-6	True	AATAAA	-22	NA	56221959	56204500	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_56206799_56207645_56207750_56208162_56208299_56210296_56210569_56212991_56213139_56213957_56214071_56216428_56216614_56221759
transcript_46424.known	chr12	-	5216	7	FSM	ENSG00000181852.18	ENST00000615206.4	5216	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	55.5960130465006	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGTCTGTGGCTGCTTTC	-56217536	False	NA	-1	True	AATACA	-21	NA	56221701	56202503	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56206799_56207645_56207750_56208162_56208299_56210296_56210569_56213957_56214071_56216428_56216614_56221590
transcript_46425.known	chr12	-	5593	7	FSM	ENSG00000181852.18	ENST00000345093.9	5593	7	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_6	28.7909129182572	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTTTGATACACTGTCT	-56217757	True	NA	NA	False	AGTAAA	-25	NA	56221922	56202178	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56206799_56207645_56207750_56208162_56208299_56210296_56210569_56213957_56214071_56216428_56216614_56221759
transcript_46426.known	chr12	-	1193	7	FSM	ENSG00000181852.18	ENST00000552656.5	1193	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_6	37.6917320730511	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACTCGACTGGCTATCA	-56217768	True	NA	NA	False	NA	NA	NA	56221933	56206446	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56206799_56207645_56207750_56208162_56208299_56210296_56210569_56213957_56214071_56216428_56216614_56221902
transcript_46436.known	chr12	-	2452	8	FSM	ENSG00000181852.18	ENST00000394013.6	2452	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	58.4158211725668	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTTTTGATGTTCCTA	-56217744	True	NA	-4	True	AAAAAG	-22	NA	56221909	56205449	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56206799_56207645_56207750_56208162_56208299_56210296_56210569_56212995_56213139_56213957_56214071_56216428_56216614_56221759
transcript_46439.known	chr12	+	663	7	FSM	ENSG00000139579.13	ENST00000399713.6	663	7	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	90.1437124201621	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGACTGAGTGCCCCAC	56221809	True	NA	NA	False	NA	NA	NA	56222014	56229032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56222200_56224833_56224936_56225372_56225512_56225623_56225696_56226178_56226261_56226355_56226420_56229013
transcript_46441.known	chr12	+	1400	7	FSM	ENSG00000139579.13	ENST00000267023.9	1400	7	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	43.9042518821735	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTTGGACTCCTTTG	56220158	True	NA	14	True	AATAAA	-14	NA	56224341	56229854	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56224442_56224833_56224936_56225372_56225512_56225623_56225696_56226178_56226261_56226355_56226420_56229013
transcript_46443.known	chr12	+	1411	7	FSM	ENSG00000139579.13	ENST00000341463.5	1411	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	88.3014093256098	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCACTCTACTCTGTGTTG	56220217	True	NA	4	True	AATAAA	-4	NA	56224400	56229844	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56224522_56224833_56224936_56225372_56225512_56225623_56225696_56226178_56226261_56226355_56226420_56229013
transcript_46445.known	chr12	+	1775	6	FSM	ENSG00000139579.13	ENST00000380198.6	1775	6	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_4	14.661514246489	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTTGGACTCCTTTG	56220175	True	NA	14	True	AATAAA	-14	NA	56224358	56229854	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56224936_56225372_56225512_56225623_56225696_56226178_56226261_56226355_56226420_56229013
transcript_46449.nic	chr12	+	1887	5	NIC	ENSG00000139579.13	novel	1400	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	243	junction_4	12.3895116933639	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTTGGACTCCTTTG	56220158	True	NA	14	True	AATAAA	-14	NA	56224341	56229854	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_56224936_56225372_56225512_56225623_56225696_56226178_56226420_56229013
transcript_46454.known	chr12	-	2520	3	FSM	ENSG00000139645.11	ENST00000680026.1	2520	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	4	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTCGGGAGACTGAGGC	-56256755	True	NA	NA	False	AATACA	-41	NA	56258370	56255322	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56257086_56257282_56257912_56258242
transcript_46458.known	chr12	+	1570	5	FSM	ENSG00000135469.14	ENST00000308197.10	1570	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	23.3345237791561	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCTTTATTATATTGTT	56265706	True	NA	NA	False	AATAAA	-16	NA	56266941	56270966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56267253_56267793_56267941_56269058_56269252_56269459_56269562_56270149
transcript_46461.known	chr12	+	1410	5	FSM	ENSG00000135469.14	ENST00000433805.6	1410	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	30.8139578762612	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCTTTATTATATTGTT	56266989	True	NA	NA	False	AATAAA	-16	NA	56267282	56270966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56267434_56267793_56267941_56269058_56269252_56269459_56269562_56270149
transcript_46462.known	chr12	+	1332	4	FSM	ENSG00000135469.14	ENST00000551911.5	1332	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	26.944387170615	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAATGTTGGGGGAAAG	56265655	True	NA	NA	False	NA	NA	NA	56266890	56270469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56267253_56267793_56267941_56269058_56269562_56270149
transcript_46469.nic	chr12	+	2985	3	NIC	ENSG00000135469.14	novel	1570	5	NA	NA	-37	0	intron_retention	FALSE	canonical	3	60	junction_1	33	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCTTTATTATATTGTT	56265617	True	NA	NA	False	AATAAA	-16	NA	56266852	56270966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_56267253_56267793_56269562_56270149
transcript_46472.known	chr12	-	4537	26	FSM	ENSG00000135473.16	ENST00000257931.9	4537	26	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_13	30.4006315723868	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGAGAACTGCTAGTGTG	-56332732	True	NA	-7	True	AATAAA	-28	NA	56334006	56316936	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56317644_56318236_56318435_56319087_56319182_56319307_56319488_56319620_56319765_56319863_56320022_56322077_56322169_56322422_56322483_56322614_56322759_56323061_56323210_56323310_56323385_56323499_56323599_56323806_56323914_56324036_56324183_56324293_56324494_56324580_56324710_56325008_56325129_56325334_56325455_56326312_56326410_56326616_56326960_56327363_56327632_56327994_56328073_56328237_56328359_56328471_56328642_56332812_56333209_56333861
transcript_46473.known	chr12	-	4576	26	FSM	ENSG00000135473.16	ENST00000440411.8	4523	26	-53	0	0	0	multi-exon	TRUE	canonical	3	94	junction_14	19.5322912122465	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGAGAACTGCTAGTGTGG	NA	False	NA	-6	True	AATAAA	-29	NA	56334053	56316935	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56317644_56318236_56318435_56319087_56319182_56319307_56319488_56319620_56319765_56319863_56320022_56322077_56322169_56322422_56322483_56322614_56322759_56323061_56323210_56323310_56323385_56323499_56323599_56323806_56323914_56324048_56324186_56324293_56324494_56324580_56324710_56325008_56325129_56325334_56325455_56326312_56326410_56326616_56326960_56327363_56327632_56327994_56328073_56328237_56328359_56328471_56328642_56332812_56333209_56333861
transcript_46494.known	chr12	-	3057	12	FSM	ENSG00000062485.19	ENST00000548567.5	3057	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_11	366.741267141828	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTGAGCCTATTATTAAA	-56282663	True	NA	-2	True	AATAAA	-16	NA	56300391	56271700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56273255_56273586_56273797_56274776_56274879_56275001_56275132_56275995_56276196_56282419_56282609_56282859_56282992_56283791_56283858_56285915_56286024_56286594_56286646_56298608_56298692_56300159
transcript_46499.known	chr12	-	2811	11	FSM	ENSG00000062485.19	ENST00000549143.5	2811	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	295.68604972166	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGAGCCTATTATTAAATA	-56282590	True	NA	0	True	AATAAA	-18	NA	56300318	56271698	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56273255_56273586_56273797_56274776_56274879_56275001_56275132_56275995_56276196_56282419_56282609_56282859_56282992_56283791_56283858_56285915_56285962_56286624_56286646_56300159
transcript_46502.known	chr12	-	2915	11	FSM	ENSG00000062485.19	ENST00000351328.8	2915	11	0	0	0	0	multi-exon	FALSE	canonical	3	869	junction_3	63.3719180710194	937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGAGCCTATTATTAAATA	-56282602	True	NA	0	True	AATAAA	-18	NA	56300330	56271698	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56273255_56273586_56273797_56274776_56274879_56275001_56275132_56275995_56276196_56282419_56282609_56282859_56282992_56283791_56283858_56285915_56286024_56286594_56286646_56300159
transcript_46510.nic	chr12	-	2925	10	NIC	ENSG00000062485.19	novel	3057	12	NA	NA	-17	0	intron_retention	FALSE	canonical	3	73	junction_7	285.1052220748	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTGAGCCTATTATTAAA	NA	False	NA	-2	True	AATAAA	-16	NA	56300408	56271700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_56273255_56273586_56273797_56274776_56274879_56275001_56275132_56275995_56276196_56282419_56282609_56282859_56282992_56285915_56286024_56286594_56286646_56300159
transcript_46516.known	chr12	-	1450	6	FSM	ENSG00000257727.6	ENST00000273308.9	1450	6	0	0	0	0	multi-exon	FALSE	canonical	3	1300	junction_2	129.74035609632	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTGTCAATCTGGACTA	-56294704	True	NA	-21	True	AATAAA	-16	NA	56315988	56309843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56310596_56310957_56311055_56311210_56311415_56314850_56314967_56315129_56315243_56315820
transcript_46525.known	chr12	-	817	3	FSM	ENSG00000257727.6	ENST00000548013.5	817	3	0	0	0	0	multi-exon	FALSE	canonical	3	1577	junction_2	36	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTTATCCTCATAATTAG	-56315872	False	NA	-14	True	AATAAA	-29	NA	56316047	56314489	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56314967_56315129_56315243_56315820
transcript_46527.known	chr12	-	666	3	FSM	ENSG00000257727.6	ENST00000553164.1	666	3	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_2	772.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAGAAATAAGAATAAAAGG	-56294716	True	NA	-32	True	AATAAA	-11	NA	56316000	56314507	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56314967_56315129_56315243_56315906
transcript_46530.known	chr12	-	670	2	FSM	ENSG00000257727.6	ENST00000546388.1	670	2	0	0	0	0	multi-exon	FALSE	canonical	3	1577	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAGAATTTGTTAGCAAA	-56315722	False	NA	NA	False	NA	NA	NA	56315897	56314649	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56315243_56315820
transcript_46532.known	chr12	+	1037	4	FSM	ENSG00000110944.9	ENST00000228534.6	1037	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	4.02768199119819	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGTCTAATTTCTAGGC	56338663	True	NA	8	True	AATAAA	-19	NA	56338883	56340410	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56339207_56339425_56339525_56339690_56339838_56339942
transcript_46538.known	chr12	-	3073	24	FSM	ENSG00000170581.14	ENST00000557235.5	3073	24	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_21	17.6658760270586	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATAACTTGCTTTCTTCT	-56357406	True	NA	NA	False	NA	NA	NA	56360126	56342935	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56343532_56343824_56344136_56346145_56346204_56346441_56346625_56346818_56346956_56348528_56348624_56348751_56348805_56348923_56349060_56349162_56349262_56349425_56349510_56349588_56349637_56350096_56350191_56350411_56350433_56350828_56350889_56351097_56351191_56351291_56351451_56354465_56354615_56354777_56354864_56355275_56355352_56355442_56355533_56355707_56355792_56356131_56356286_56356440_56356579_56360057
transcript_4654.nic	chr1	+	3876	18	NIC	ENSG00000133226.18	novel	3110	18	NA	NA	-88	-19	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	391.491248847117	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTTGCCACTCTTAC	24615427	True	NA	4	True	AATAAA	-12	NA	24643183	24673262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651408_24651613_24652433_24652629_24652912_24653033_24654854_24655130_24660718_24660800_24661309_24661397_24662659_24662805_24663182_24663225_24666814_24666926_24669122_24669588_24670119_24670316_24671385_24671596_24672181
transcript_46542.known	chr12	-	4850	23	FSM	ENSG00000170581.14	ENST00000652091.1	4850	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	25.2437701994828	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTGATCTGGAAATGTC	-56357441	True	NA	-20	True	AATAAA	-4	NA	56360161	56341612	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56343532_56343824_56344136_56346145_56346204_56346441_56346625_56346818_56346956_56348528_56348624_56348751_56348805_56348923_56349060_56349162_56349262_56349425_56349510_56349588_56349637_56350096_56350191_56350411_56350433_56350828_56350889_56351097_56351191_56351291_56351451_56354458_56354615_56354777_56355352_56355442_56355533_56355707_56355792_56356131_56356286_56356440_56356579_56360057
transcript_46545.known	chr12	-	4319	23	FSM	ENSG00000170581.14	ENST00000651915.1	4319	23	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_8	20.6807692041673	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTGGAAATGTCTCATC	-56357411	True	NA	-15	True	AATAAA	-9	NA	56360131	56341607	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56343532_56343824_56344136_56346145_56346204_56346441_56346625_56346818_56346956_56348528_56348624_56348751_56348805_56348923_56349060_56349425_56349510_56349588_56349637_56350096_56350191_56350411_56350433_56350828_56350889_56351097_56351191_56351291_56351451_56354465_56354615_56354777_56354864_56355275_56355352_56355442_56355533_56355707_56355804_56356131_56356286_56356440_56356579_56360057
transcript_46567.known	chr12	-	4376	29	FSM	ENSG00000111602.12	ENST00000229201.4	4376	29	0	0	0	0	multi-exon	TRUE	canonical	3	91	junction_23	109.831039068458	401	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGACTTGGCGATATGT	-56438781	True	NA	-6	True	ATTAAA	-27	NA	56449403	56417118	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56417787_56417906_56418009_56418133_56418360_56420568_56420688_56420812_56420882_56420962_56421135_56421350_56421494_56421726_56421810_56421898_56422017_56422105_56422192_56422846_56422993_56423273_56423476_56423583_56423708_56423796_56423895_56424761_56424914_56425014_56425153_56428235_56428406_56428548_56428653_56428882_56429101_56430104_56430282_56430880_56430969_56431470_56431605_56432368_56432522_56433025_56433128_56433380_56433444_56433537_56433653_56433772_56433927_56434073_56434232_56449309
transcript_46624.known	chr12	-	2387	18	FSM	ENSG00000135423.13	ENST00000311966.9	2387	18	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_14	13.0253944145265	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGCTAAACCCAGTCCT	-56487411	True	NA	-11	True	AATAAA	-18	NA	56488161	56470951	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56471644_56471772_56471837_56472118_56472196_56472689_56472752_56473227_56473321_56473462_56473595_56474543_56474721_56474845_56474897_56475043_56475111_56475623_56475683_56475944_56475978_56477659_56477719_56477932_56478097_56478182_56478263_56479051_56479182_56479779_56479902_56480287_56480388_56487936
transcript_46629.known	chr12	-	2225	17	FSM	ENSG00000135423.13	ENST00000424141.6	2225	17	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_14	21.2275616828688	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGCTAAACCCAGTCCT	-56487379	True	NA	-11	True	AATAAA	-18	NA	56488129	56470951	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56471644_56471772_56471837_56472118_56472196_56472689_56472752_56473227_56473321_56473462_56473595_56474543_56474721_56474845_56474897_56475043_56475111_56475623_56475683_56475944_56475978_56477659_56477719_56477932_56478097_56478182_56478263_56479779_56479902_56480287_56480388_56487936
transcript_4663.known	chr1	+	2671	17	FSM	ENSG00000133226.18	ENST00000479034.5	2671	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	388.746523296351	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTATGAACTCTGTATA	24615551	True	NA	NA	False	NA	NA	NA	24643307	24671595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651408_24651613_24652433_24652629_24652912_24653033_24654854_24655130_24660718_24660800_24661309_24661397_24662659_24662805_24663182_24663225_24666814_24666926_24669122_24669588_24670119_24670316_24671385
transcript_46630.nnic	chr12	-	2601	17	NIC	ENSG00000135423.13	novel	2694	18	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	23.8896388367426	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTTGCTAAACCCAGTC	NA	False	NA	-13	True	AATAAA	-16	NA	56488410	56470953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_56471644_56471772_56471837_56472118_56472196_56472689_56472752_56473227_56473321_56473462_56473595_56474543_56474721_56474845_56474897_56475043_56475111_56475623_56475683_56477659_56477719_56477932_56478097_56478182_56478263_56479051_56479182_56479779_56479902_56480287_56480388_56487936
transcript_4664.known	chr1	+	3735	17	FSM	ENSG00000133226.18	ENST00000323848.14	3735	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	427.34953035396	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAGTAGTGCTTATGTAAA	24615545	True	NA	23	True	AATAAA	-31	NA	24643301	24673281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651408_24651613_24652433_24652629_24652912_24653033_24654854_24655130_24660718_24660800_24661309_24661397_24662659_24662805_24666814_24666926_24669122_24669588_24670119_24670316_24671385_24671596_24672181
transcript_46643.known	chr12	-	2296	15	FSM	ENSG00000135423.13	ENST00000610413.4	2296	15	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_14	23.8011532905274	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCAGTCCTTCTTTCTT	NA	False	NA	-3	True	AATAAA	-26	NA	56488414	56470943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56471644_56471772_56471837_56472118_56472196_56472689_56472752_56473227_56473321_56473462_56473595_56474543_56474721_56474845_56474897_56475043_56475111_56475623_56475683_56475944_56475978_56477659_56477719_56477932_56478097_56478182_56478263_56487936
transcript_46652.nnic	chr12	-	1718	11	NIC	ENSG00000135423.13	novel	2296	15	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	28.3353136562841	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTTGCTAAACCCAGTC	-56488084	False	NA	-13	True	AATAAA	-16	NA	56488182	56470953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_56471644_56471772_56471837_56472118_56472196_56472689_56472752_56473227_56473321_56473462_56473595_56474543_56474721_56474845_56474897_56475043_56475111_56475623_56475683_56487936
transcript_46653.known	chr12	+	10769	2	FSM	ENSG00000176422.14	ENST00000338146.7	10769	2	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGCTCTGAGAGTCTAT	56467220	True	NA	NA	False	AATAAA	-39	NA	56468577	56479708	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56468677_56469038
transcript_46656.known	chr12	+	8488	14	FSM	ENSG00000076067.13	ENST00000262031.10	8488	14	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	6.4450338663549	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTGGTGTTGATGGTGT	NA	False	NA	6	True	TATAAA	-33	NA	56521819	56596193	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56522090_56562416_56562584_56568974_56569034_56569898_56569991_56571697_56571856_56581183_56581264_56581398_56581509_56581832_56581880_56582058_56582153_56586848_56586927_56587553_56587665_56588293_56588375_56588931_56589019_56589139
transcript_46658.known	chr12	-	8938	29	FSM	ENSG00000076108.12	ENST00000549884.6	8938	29	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_28	38.0368376762339	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTGTTTTATTTAAAAA	-56625785	True	NA	NA	False	NA	NA	NA	56630326	56595595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56598784_56598867_56599012_56599128_56599359_56599701_56599849_56599963_56600097_56600200_56600491_56600680_56600833_56600942_56601099_56601179_56601403_56601545_56602193_56602712_56602858_56603358_56603419_56603519_56603701_56604216_56604292_56604584_56604800_56605072_56605328_56605829_56606064_56606246_56606313_56606632_56606734_56609735_56609947_56610113_56610216_56610408_56610518_56611572_56611634_56611772_56612247_56613014_56613234_56613952_56614139_56615013_56615608_56617394_56617533_56630124
transcript_46659.known	chr12	-	2773	13	FSM	ENSG00000076108.12	ENST00000549787.5	2773	13	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_8	52.9939068824583	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTTTTCTGTTTTATT	-56603524	False	NA	NA	False	AAAAAG	-15	NA	56603552	56598358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56598784_56598867_56599012_56599128_56599359_56599701_56599849_56599963_56600097_56600200_56600491_56600680_56600833_56600942_56601087_56601179_56601403_56601545_56602193_56602712_56602858_56603358_56603419_56603519
transcript_46660.known	chr12	-	614	6	FSM	ENSG00000076108.12	ENST00000547650.1	614	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	42.0979809492094	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAAAATGAAGGAAAAGGA	-56610464	False	NA	5	True	AAAAAG	-24	NA	56610479	56605991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56606064_56606246_56606313_56606632_56606734_56609735_56609938_56610113_56610216_56610408
transcript_46666.known	chr12	-	1759	10	FSM	ENSG00000110955.9	ENST00000262030.8	1759	10	0	0	0	0	multi-exon	FALSE	canonical	3	3887	junction_7	546.434503547009	3383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGATTCTCTTGGTT	-56550394	True	NA	-4	True	AATAAA	-18	NA	56645984	56638174	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56638424_56639105_56639308_56639979_56640193_56642457_56642581_56642672_56642832_56643402_56643588_56643836_56643959_56644780_56644956_56645170_56645354_56645836
transcript_46690.known	chr12	-	705	5	FSM	ENSG00000110955.9	ENST00000547808.5	705	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	2247.99071394879	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAGAAGCTGTGGCAAAA	-56550394	True	NA	NA	False	NA	NA	NA	56645984	56638375	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56638424_56639105_56639308_56639979_56640151_56645217_56645354_56645836
transcript_46695.known	chr12	-	2077	9	FSM	ENSG00000110958.16	ENST00000614328.4	2077	9	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_7	1435.19658387797	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCTGCATTTTGGCAGT	-56688398	False	NA	-10	True	AATAAA	-30	NA	56688408	56663342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56664499_56664775_56664801_56666203_56666267_56670274_56670365_56671748_56671848_56672739_56672810_56672951_56673066_56686868_56686918_56687997
transcript_46706.known	chr12	-	1898	8	FSM	ENSG00000110958.16	ENST00000262033.11	1898	8	0	0	0	0	multi-exon	FALSE	canonical	3	3235	junction_5	88.4044508991233	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGAACTTCTGCATTTT	-56635420	True	NA	-16	True	AATAAA	-24	NA	56688284	56663348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56664499_56664775_56664801_56666203_56666267_56670274_56670365_56671748_56671848_56672739_56672810_56672951_56673066_56687997
transcript_46707.nic	chr12	-	2382	8	NIC	ENSG00000110958.16	novel	1898	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_7	1157.87301478502	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTGGAAGACTTCTTGG	-56635420	True	NA	13	True	TTTAAA	-22	NA	56688284	56663612	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_56664499_56664775_56664801_56666203_56666267_56670274_56670365_56671748_56671848_56672739_56672810_56672951_56673066_56687249
transcript_46713.known	chr12	-	1547	7	FSM	ENSG00000110958.16	ENST00000414274.7	1547	7	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_3	1215.61901241028	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTGGAAGACTTCTTGG	-56635423	True	NA	13	True	TTTAAA	-22	NA	56688287	56663612	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56664499_56664775_56664801_56666203_56666267_56671748_56671848_56672739_56672810_56672951_56673066_56687997
transcript_46715.known	chr12	-	1017	7	FSM	ENSG00000110958.16	ENST00000448157.6	1017	7	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	1228.30109636576	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTTCTTCATAACATAGA	-56635420	True	NA	4	True	AATAAA	-19	NA	56688284	56664166	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56664499_56664775_56664801_56670274_56670365_56671748_56671848_56672739_56672810_56672951_56673066_56687997
transcript_4674.nic	chr1	+	2307	15	ISM	ENSG00000133226.18	ENST00000479034.5	2671	17	-35	2001	1	86	5prime_fragment	FALSE	canonical	0	0	junction_6	411.97915169165	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTATGCTTTTCCATTA	24615516	True	NA	NA	False	AGTAAA	-3	NA	24643272	24669594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651408_24651613_24652433_24652629_24652912_24653033_24654854_24655130_24660718_24660800_24661309_24661397_24662659_24662805_24663182_24663225_24666814_24666926_24669122
transcript_46743.known	chr12	-	1459	13	FSM	ENSG00000198056.15	ENST00000552590.6	1459	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	104.976452386026	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCCTTGAGAAATAATTTA	-56744977	True	NA	16	True	AATAAA	-42	NA	56752373	56731595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56731735_56734146_56734246_56738433_56738526_56739293_56739364_56741434_56741577_56741745_56741838_56742986_56743097_56744064_56744124_56746044_56746180_56746776_56746855_56746925_56747033_56751037_56751196_56752195
transcript_46751.known	chr12	-	1059	8	FSM	ENSG00000196531.14	ENST00000393891.8	1059	8	0	0	0	0	multi-exon	FALSE	canonical	3	1197	junction_7	3427.68182506451	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTCAGTCGGTGACTGG	-56633101	True	NA	-12	True	AATAAA	-20	NA	56725267	56712434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714688_56724451_56724524_56724961
transcript_46752.known	chr12	-	964	8	FSM	ENSG00000196531.14	ENST00000546392.6	964	8	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_7	3739.08155261996	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAACTGCAGCTTGGTTT	-56725501	False	NA	-27	True	NA	NA	NA	56725516	56712503	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714688_56724451_56724550_56725262
transcript_46755.known	chr12	-	712	7	FSM	ENSG00000196531.14	ENST00000678376.1	712	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_6	4094.68373829612	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGGTGACTGGTCTCTTC	-56633120	True	NA	-5	True	AATAAA	-27	NA	56725286	56712427	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714688_56725262
transcript_46760.known	chr12	+	1751	6	FSM	ENSG00000025423.11	ENST00000554643.5	1751	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	7.33757453113766	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGTCAGCAGTCTTT	56752303	True	NA	18	True	AATAAA	-23	NA	56752448	56787790	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_56752582_56763217_56763415_56773833_56774166_56781973_56782233_56784852_56785017_56787124
transcript_46764.known	chr12	-	1206	6	FSM	ENSG00000198056.15	ENST00000550224.5	1206	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	143.187429615871	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATGCATATTTGTAAAC	-56744917	True	NA	NA	False	AGTAAA	-1	NA	56752313	56743513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56744124_56746044_56746180_56746776_56746855_56746925_56747033_56751037_56751196_56752195
transcript_46770.known	chr12	-	844	9	FSM	ENSG00000196531.14	ENST00000550920.6	844	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	4623.6874286115	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGGTGACTGGTCTCTTC	-56633120	True	NA	-5	True	AATAAA	-27	NA	56725286	56712427	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714688_56719536_56719597_56724451_56724524_56725262
transcript_46771.known	chr12	-	1875	14	FSM	ENSG00000198056.15	ENST00000672280.1	1875	14	0	0	0	0	multi-exon	TRUE	canonical	2	16	junction_5	125.560377046358	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCCATCTCAAAAAAGAAACA	-56744978	True	NA	NA	False	NA	NA	NA	56752374	56731295	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_56731735_56734146_56734246_56738433_56738526_56739293_56739364_56740011_56740129_56741434_56741577_56741745_56741838_56742986_56743097_56744064_56744124_56746044_56746182_56746780_56746855_56746925_56747033_56751037_56751196_56752195
transcript_46774.known	chr12	-	6268	2	FSM	ENSG00000166860.3	ENST00000300101.3	6268	2	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	0	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAGTTCTCTTCCTACCT	-57004487	True	NA	-5	True	AATAAA	-16	NA	57006546	56998835	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57004962_57006404
transcript_46775.known	chr12	-	930	8	FSM	ENSG00000166863.13	ENST00000357616.7	930	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	22.4926291781761	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGGTGTGTGTGTTTA	-57015871	True	NA	2	True	AATAAA	-18	NA	57016538	57009999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57010289_57012377_57012453_57012620_57012738_57012821_57012876_57013358_57013389_57013577_57013672_57015683_57015803_57016386
transcript_46776.known	chr12	-	804	7	FSM	ENSG00000166863.13	ENST00000458521.7	804	7	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	6.96219952473514	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGGTGTGTGTGTTTA	-57015862	True	NA	2	True	AATAAA	-18	NA	57016529	57009999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57010289_57012377_57012453_57012821_57012876_57013358_57013389_57013577_57013672_57015683_57015803_57016386
transcript_46777.known	chr12	-	578	4	FSM	ENSG00000166863.13	ENST00000496757.1	578	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	6.94422221866655	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGCTCTCCCTCTGCTGG	-57015862	True	NA	NA	False	NA	NA	NA	57016529	57013166	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57013389_57013577_57013672_57015683_57015803_57016386
transcript_46779.known	chr12	-	5617	9	FSM	ENSG00000166881.10	ENST00000300128.9	5617	9	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_5	25.298221281347	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGGTCTTTCTTAATG	-57073256	True	NA	-3	True	AATAAA	-14	NA	57078791	57055642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57060060_57060771_57060946_57063118_57063345_57064070_57064186_57064645_57064740_57069233_57069307_57070673_57070894_57072787_57072913_57078618
transcript_46783.known	chr12	-	5370	8	FSM	ENSG00000166881.10	ENST00000379391.7	5370	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	56.8330889535313	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGGTCTTTCTTAATG	-57073228	True	NA	-3	True	AATAAA	-14	NA	57078763	57055642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57060060_57060771_57060946_57063118_57063345_57064070_57064186_57064645_57064740_57070819_57070894_57072787_57072913_57078618
transcript_46784.known	chr12	-	1381	8	FSM	ENSG00000166881.10	ENST00000554340.1	1381	8	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_3	74.8080536971734	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCATTCTAGCTCCTTCTTG	-57073228	True	NA	NA	False	NA	NA	NA	57078763	57059589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57060060_57060771_57060946_57063118_57063345_57064645_57064740_57069233_57069307_57070819_57070894_57072787_57072913_57078618
transcript_46790.known	chr12	-	4018	23	FSM	ENSG00000166888.12	ENST00000553533.2	4018	23	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	38.9526359986031	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCCTAAGCCATAAAATAAA	-57111405	False	NA	NA	False	NA	NA	NA	57111433	57095477	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57096762_57096849_57096979_57097067_57097134_57098504_57098598_57098791_57098903_57099014_57099079_57099293_57099441_57099766_57099904_57099995_57100091_57100845_57100900_57102289_57102497_57102828_57102922_57104463_57104587_57104725_57104814_57105150_57105340_57105467_57105600_57106190_57106340_57106527_57106581_57106692_57106832_57107230_57107315_57107604_57107744_57108162_57108300_57111128
transcript_46795.known	chr12	-	2728	23	FSM	ENSG00000166888.12	ENST00000640254.2	2728	23	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_22	37.2322673972079	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACAGGACCTCACTAAGC	-57108758	True	NA	NA	False	NA	NA	NA	57111374	57096722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57096762_57096849_57096979_57097067_57097134_57098504_57098598_57098791_57098903_57099014_57099079_57099293_57099441_57099766_57099904_57099995_57100091_57102289_57102497_57102828_57102922_57104463_57104587_57104725_57104814_57105150_57105340_57105467_57105600_57106190_57106340_57106527_57106581_57106692_57106832_57107230_57107315_57107604_57107744_57108162_57108300_57110042_57110111_57111128
transcript_46799.nic	chr12	-	4106	22	NIC	ENSG00000166888.12	novel	3963	22	NA	NA	-2	0	combination_of_known_junctions	TRUE	canonical	3	15	junction_21	28.4632077428272	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCTACTGTACACAATCT	-57110314	False	2616	NA	False	AATAAA	-26	NA	57110342	57095432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_57096762_57096849_57096979_57097067_57097134_57098504_57098598_57098791_57098903_57099014_57099079_57099293_57099441_57099766_57099904_57099995_57100091_57102289_57102497_57102828_57102922_57104463_57104587_57104725_57104814_57105150_57105340_57105467_57105600_57106190_57106340_57106527_57106581_57106692_57106832_57107230_57107315_57107604_57107744_57108162_57108300_57109940
transcript_46801.known	chr12	-	3119	22	FSM	ENSG00000166888.12	ENST00000543873.6	3119	22	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_21	30.7879147005765	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCTGAGCAGGAGGGGGG	-57110278	False	2616	NA	False	NA	NA	NA	57110306	57096247	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57096762_57096849_57096979_57097067_57097134_57098504_57098598_57098791_57098903_57099014_57099079_57099293_57099441_57099766_57099904_57099995_57100091_57102289_57102497_57102828_57102922_57104463_57104587_57104725_57104814_57105150_57105340_57105467_57105600_57106190_57106340_57106527_57106581_57106692_57106832_57107230_57107315_57107604_57107744_57108162_57108300_57110076
transcript_46802.known	chr12	-	3037	22	FSM	ENSG00000166888.12	ENST00000454075.7	3037	22	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_21	29.6208083996611	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCCTTCCAGCACTGACT	-57108758	True	NA	NA	False	NA	NA	NA	57111374	57096364	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57096762_57096849_57096979_57097067_57097134_57098504_57098598_57098791_57098903_57099014_57099079_57099293_57099441_57099766_57099904_57099995_57100091_57102289_57102497_57102828_57102922_57104463_57104587_57104725_57104814_57105150_57105340_57105467_57105600_57106190_57106340_57106527_57106581_57106692_57106832_57107230_57107315_57107604_57107744_57108162_57108300_57111109
transcript_46810.known	chr12	-	3380	21	FSM	ENSG00000166888.12	ENST00000554764.6	3380	21	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_19	30.4704364917866	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTTGCATGACCACATAG	-57108746	True	NA	-20	True	NA	NA	NA	57111362	57095851	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57096762_57096849_57096979_57097067_57097134_57098504_57098598_57098791_57098903_57099014_57099079_57099293_57099441_57099766_57099904_57099995_57100091_57102289_57102497_57102828_57102922_57104463_57104587_57104725_57104814_57105150_57105340_57105467_57105600_57106190_57106340_57106527_57106581_57106692_57106832_57107230_57107315_57108162_57108300_57111128
transcript_46817.known	chr12	-	2879	20	FSM	ENSG00000166888.12	ENST00000538913.6	2879	20	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_19	32.7744749002352	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTTCTCCGCCCATTCT	-57108730	True	NA	NA	False	GGGGCT	-43	NA	57111346	57096199	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57096762_57096849_57096979_57097067_57097134_57098504_57098598_57098791_57098903_57099014_57099079_57099293_57099441_57099766_57099904_57099995_57100091_57102289_57102497_57102828_57102922_57104463_57104587_57104725_57104814_57105150_57105340_57105467_57105600_57106190_57106340_57106527_57106581_57106692_57106832_57107230_57107315_57111128
transcript_46828.nic	chr12	+	3458	15	ISM	ENSG00000123384.14	ENST00000243077.8	14923	89	0	49932	0	-2983	5prime_fragment	TRUE	canonical	3	17	junction_1	7.51766626836075	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCAAGCGTGGTGGCAG	57124042	True	NA	NA	False	AATACA	-5	NA	57128482	57163429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_57129032_57138458_57138582_57141373_57141512_57143678_57143799_57144971_57145101_57145226_57145491_57154207_57154371_57154478_57154702_57156093_57156284_57156776_57156921_57158401_57158639_57159824_57160006_57160892_57161116_57162316_57162519_57162857
transcript_46833.known	chr12	+	14923	89	FSM	ENSG00000123384.14	ENST00000243077.8	14923	89	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	103.081498463173	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGCCAAAAAAAAAAAAAAGA	57124042	True	NA	105	True	AATAAA	-27	NA	57128482	57213361	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57129032_57138458_57138582_57141373_57141512_57143678_57143799_57144971_57145101_57145226_57145491_57154207_57154371_57154478_57154702_57156093_57156284_57156776_57156921_57158401_57158639_57159824_57160006_57160892_57161116_57162316_57162519_57162857_57162984_57165804_57165946_57166083_57166210_57166929_57167047_57167443_57167525_57169139_57169308_57173167_57173351_57173779_57173981_57175459_57175706_57175908_57176107_57177040_57177246_57177426_57177592_57178358_57178604_57178889_57179022_57179328_57179557_57179781_57179957_57180046_57180142_57180329_57180480_57180666_57180808_57181156_57181292_57183378_57183511_57183774_57183910_57184084_57184215_57184325_57184453_57184838_57184991_57185080_57185206_57185530_57185909_57187266_57187457_57190804_57191010_57191319_57191513_57192844_57192971_57193175_57193305_57193565_57193686_57193898_57194013_57194353_57194504_57194576_57194700_57194984_57195102_57195270_57195400_57195657_57195781_57195862_57196004_57196086_57196278_57196981_57197166_57197298_57197385_57197544_57197665_57198155_57198344_57198464_57198671_57199211_57199401_57199876_57200026_57200441_57200536_57200698_57200816_57201033_57201154_57201496_57201620_57201779_57201906_57202420_57202538_57203180_57203288_57203388_57203522_57204409_57204530_57204626_57204750_57205108_57205250_57205350_57205486_57205557_57205678_57206472_57206742_57208037_57208217_57208710_57208818_57209082_57209200_57209691_57209869_57210028_57210170_57210306_57210481_57210717_57210880_57211175_57211351_57211486_57211589_57211749_57211815_57211926_57212018_57212116_57212262_57212414
transcript_46849.nnic	chr12	+	2511	8	NNC	ENSG00000166886.13	novel	2491	7	NA	NA	-57	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	13.7677529178934	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTATGACCCCTGCCTTG	57088729	True	NA	18	True	AATAAA	-19	NA	57088985	57095474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_57089355_57091124_57091999_57092447_57092582_57092916_57092969_57093062_57093196_57093406_57093599_57094611_57094921_57095026
transcript_46850.known	chr12	+	2491	7	FSM	ENSG00000166886.13	ENST00000300131.8	2491	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	4.87909372276815	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGACCCCTGCCTTGAG	57088857	True	NA	20	True	AATAAA	-21	NA	57089113	57095476	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57089355_57091124_57091999_57092447_57092582_57092916_57092969_57093062_57093196_57093406_57093599_57094611
transcript_46851.known	chr12	+	1693	7	FSM	ENSG00000123384.14	ENST00000553277.5	1693	7	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_6	11.7579760163048	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTGTCAGACGCCTGA	57124052	True	NA	NA	False	AATAAA	-22	NA	57128492	57150059	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57129032_57138458_57138582_57141373_57141512_57143678_57143799_57144971_57145101_57145226_57145491_57149679
transcript_46852.known	chr12	+	2318	6	FSM	ENSG00000166886.13	ENST00000342556.6	2318	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	11.8659175793531	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTATGACCCCTGCCTTGA	57088837	True	NA	19	True	AATAAA	-20	NA	57089093	57095475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57089355_57091124_57091999_57092447_57092582_57092916_57092969_57093062_57093196_57094611
transcript_46856.known	chr12	+	1805	2	FSM	ENSG00000182379.10	ENST00000349394.6	1805	2	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTGTGTGAGACCTTTGT	57216620	True	NA	NA	False	AATAAA	-16	NA	57216793	57226449	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57217027_57224877
transcript_46861.known	chr12	+	1904	12	FSM	ENSG00000182199.11	ENST00000557433.5	1904	12	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_4	334.793781353624	1562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTTTCCATTACTGTG	57205566	True	NA	34	True	AATAAA	-13	NA	57229758	57234726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57229812_57230802_57231001_57231480_57231561_57231712_57231918_57232210_57232293_57232452_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
transcript_46867.known	chr12	+	1918	12	FSM	ENSG00000182199.11	ENST00000557487.5	1918	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	340.277548359211	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTTTCCATTACTGTG	57205518	True	NA	34	True	AATAAA	-13	NA	57229710	57234726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57229812_57230802_57231001_57231480_57231561_57231712_57231914_57232210_57232293_57232482_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
transcript_46871.known	chr12	+	2006	12	FSM	ENSG00000182199.11	ENST00000414700.7	2006	12	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	325.806716519052	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTTTCCATTACTGTG	57205893	False	NA	34	True	AATAAA	-13	NA	57230085	57234726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57230245_57230802_57231001_57231480_57231561_57231712_57231914_57232210_57232293_57232452_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
transcript_46874.known	chr12	+	2152	12	FSM	ENSG00000182199.11	ENST00000553837.5	2152	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	453.79558145939	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTTTCCATTACTGTG	57230262	False	NA	34	True	AATAAA	-13	NA	57230383	57234726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57230661_57230802_57231001_57231480_57231561_57231712_57231914_57232210_57232293_57232424_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
transcript_46876.known	chr12	+	2121	12	FSM	ENSG00000182199.11	ENST00000449049.7	2121	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	340.581321219524	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTATCTAATAAAATGCT	57230238	True	NA	7	True	NA	NA	NA	57230359	57234699	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57230661_57230802_57231001_57231480_57231561_57231712_57231914_57232210_57232293_57232452_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
transcript_46880.known	chr12	+	1765	12	FSM	ENSG00000182199.11	ENST00000553474.5	1765	12	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	339.728525552948	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGACTTAGAAGGAGGGC	57230315	False	NA	31	True	NA	NA	NA	57230327	57234551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57230421_57230802_57231001_57231480_57231561_57231712_57231914_57232210_57232293_57232452_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
transcript_46896.known	chr12	+	2215	11	FSM	ENSG00000182199.11	ENST00000556825.5	2215	11	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_2	320.366352790052	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGCTTCTGTTTGATCC	NA	False	NA	28	True	AATGAA	-16	NA	57229572	57234935	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57229812_57230802_57231001_57231712_57231914_57232210_57232293_57232452_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
transcript_46899.known	chr12	+	1659	11	FSM	ENSG00000182199.11	ENST00000557348.5	1659	11	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	441.736618359855	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCAAGAGCCAGGTATAGT	57205910	False	NA	-44	True	AATAGA	-45	NA	57230102	57234476	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57230245_57230802_57231001_57231712_57231914_57232210_57232293_57232452_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
transcript_4693.nic	chr1	+	1124	7	ISM	ENSG00000133226.18	ENST00000479034.5	2671	17	-299	19081	-263	0	5prime_fragment	FALSE	canonical	0	0	junction_6	580.899422352001	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAAGGAGAAGACCCGAC	NA	False	NA	NA	False	AAAAAG	-5	NA	24643008	24652514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651408_24651613_24652433
transcript_4694.known	chr1	+	768	7	FSM	ENSG00000133226.18	ENST00000468822.5	768	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	716.702731650686	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAAGGAGAAGACCCGAC	24615518	True	NA	NA	False	AAAAAG	-5	NA	24643274	24652514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651498_24651613_24652433
transcript_46940.known	chr12	-	4372	24	FSM	ENSG00000179912.21	ENST00000402412.6	4411	24	38	1	0	0	multi-exon	TRUE	canonical	3	40	junction_13	12.3803918386857	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCAGTCACTGTTTCTCT	-57430975	False	NA	-9	True	TATAAA	-20	NA	57431005	57253764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57255114_57255989_57256075_57256413_57256512_57257989_57258138_57258889_57259060_57266730_57266832_57268302_57268458_57268921_57269083_57269322_57269450_57269751_57269995_57280357_57280531_57283823_57284057_57289008_57289041_57292571_57292668_57295398_57295508_57296410_57296552_57297327_57297388_57298089_57298169_57299351_57299479_57300094_57300182_57303175_57303218_57310263_57310464_57395748_57395819_57430719
transcript_46941.known	chr12	-	4092	24	FSM	ENSG00000179912.21	ENST00000634871.1	4092	24	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_21	24.0016540072776	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCACTGGACATCAGTC	-57430140	True	NA	-20	True	TATAAA	-9	NA	57430808	57253775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57255114_57255989_57256075_57256413_57256512_57257989_57258138_57258889_57259060_57266730_57266832_57268302_57268458_57268921_57269083_57269322_57269450_57269751_57269995_57280357_57280531_57283823_57284057_57289008_57289041_57295398_57295508_57296410_57296552_57297327_57297388_57298089_57298169_57299351_57299479_57300094_57300182_57303175_57303218_57305639_57305664_57310263_57310464_57395748_57395819_57430719
transcript_46948.nic	chr12	-	817	6	ISM	ENSG00000179912.21	ENST00000402412.6	4411	24	7	45614	7	-1374	5prime_fragment	FALSE	canonical	3	62	junction_5	7.30479294709987	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCCAAGGAAGATGCTGT	-57430987	True	NA	NA	False	AAGAAA	-2	NA	57431036	57299377	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_57299479_57300094_57300182_57303175_57303218_57310263_57310464_57395748_57395819_57430719
transcript_46951.nic	chr12	-	250	3	ISM	ENSG00000179912.21	ENST00000634871.1	4092	24	4	56593	4	-29	5prime_fragment	FALSE	canonical	3	62	junction_2	3.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGTGGAAGAATCTGTAAA	-57430136	True	NA	-66	True	AATGAA	-17	NA	57430804	57310368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_57310464_57395748_57395819_57430719
transcript_46952.known	chr12	+	5779	29	FSM	ENSG00000155980.13	ENST00000455537.7	5779	29	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_7	8.78854484019756	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTTGTAAATATTCTTT	57549234	True	NA	16	True	AATAAA	-22	NA	57550043	57586633	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57550401_57563438_57563527_57563619_57563694_57564107_57564213_57564459_57564509_57564917_57564974_57567125_57567214_57567493_57567619_57568962_57569068_57569255_57569405_57569534_57569684_57569986_57570163_57571320_57571390_57572060_57572268_57572579_57572727_57575083_57575273_57575639_57575758_57576086_57576152_57576268_57576379_57576760_57576863_57577712_57577774_57578008_57578081_57578237_57578343_57580955_57581173_57581414_57581569_57581869_57581953_57582601_57582630_57583100_57583216_57584217
transcript_46955.known	chr12	-	2323	16	FSM	ENSG00000123329.20	ENST00000430041.6	2323	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_12	6.49786289653931	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTCTGATGCAGTTCC	NA	False	NA	-14	True	CATAAA	-11	NA	57478198	57472269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57472689_57473602_57473709_57474041_57474177_57474422_57474477_57474625_57474704_57474874_57474974_57475290_57475399_57475482_57475616_57475832_57475932_57476070_57476167_57476363_57476455_57476589_57476652_57476870_57476964_57477155_57477270_57477458_57477681_57477784
transcript_46957.known	chr12	-	1439	16	FSM	ENSG00000175203.17	ENST00000549394.5	1439	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	213.663494516234	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTTTACTATAACTCTAG	-57539579	True	NA	NA	False	NA	NA	NA	57547120	57530616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57530776_57532014_57532107_57532212_57532316_57532571_57532644_57532732_57532811_57532983_57533023_57533237_57533304_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748_57535846_57538252_57538348_57541363_57541373_57546027_57546097_57547027
transcript_46959.known	chr12	-	1677	16	FSM	ENSG00000175203.17	ENST00000434715.7	1677	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	212.747696161961	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGCCTCTGCTGTGTTTC	-57539600	True	NA	-4	True	ATTAAA	-16	NA	57547141	57530310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57530776_57532014_57532107_57532212_57532316_57532571_57532644_57532732_57532811_57532983_57533023_57533237_57533304_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748_57535846_57538518_57538525_57541363_57541373_57546027_57546097_57547027
transcript_4697.known	chr1	+	673	6	FSM	ENSG00000133226.18	ENST00000490543.5	673	6	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_3	730.522169410347	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATCATACAATAGATGCAT	24615548	True	NA	85	True	AAAAAG	-44	NA	24643304	24650086	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_24643348_24645983_24646074_24646666_24646790_24647078_24647209_24648858_24649030_24649970
transcript_46970.known	chr12	-	1705	15	FSM	ENSG00000175203.17	ENST00000543672.6	1705	15	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_12	184.105407363304	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCCTCTGCTGTGTTTCC	-57539636	True	NA	-3	True	ATTAAA	-17	NA	57547177	57530309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57530776_57532014_57532107_57532212_57532316_57532571_57532644_57532732_57532811_57532983_57533023_57533237_57533304_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748_57535846_57538518_57538525_57546027_57546097_57547027
transcript_46976.known	chr12	-	1973	14	FSM	ENSG00000175203.17	ENST00000548249.6	1973	14	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_10	33.5684410821592	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGGGTCTTGTCTTTACA	-57539651	True	NA	99	True	ATTAAA	-5	NA	57547192	57530050	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57530776_57532014_57532107_57532212_57532316_57532571_57532644_57532732_57532811_57532983_57533023_57533237_57533304_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748_57535846_57546027_57546097_57547027
transcript_46985.known	chr12	+	4202	13	FSM	ENSG00000166987.15	ENST00000355673.8	4202	13	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_7	15.6655584714437	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGCTCTGTACTCATT	57522726	True	NA	11	True	NA	NA	NA	57522823	57530148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57523012_57524028_57524093_57524279_57524417_57524719_57524823_57524952_57525116_57525347_57526389_57526565_57527228_57527506_57527661_57527847_57528018_57528146_57528561_57528665_57528719_57528945_57529010_57529159
transcript_46986.known	chr12	-	1677	13	FSM	ENSG00000175203.17	ENST00000678322.1	1677	13	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_12	146.740417063602	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCCTCTGCTGTGTTTCC	-57539683	True	NA	-3	True	ATTAAA	-17	NA	57547224	57530309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57530776_57532014_57532107_57532212_57532316_57532571_57532644_57532732_57532811_57532983_57533023_57533237_57533304_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748_57535846_57547027
transcript_46987.known	chr12	-	1869	13	FSM	ENSG00000175203.17	ENST00000678505.1	1869	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	150.451450271803	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGTACAAAACAGAATTAAAA	-57539636	True	NA	76	True	NA	NA	NA	57547177	57530073	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57530776_57532014_57532107_57532212_57532316_57532571_57532644_57532732_57532811_57532983_57533023_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748_57535846_57546027_57546097_57547027
transcript_46988.known	chr12	-	1527	13	FSM	ENSG00000175203.17	ENST00000550201.5	1527	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	148.817188374044	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTACAACTGTTTCTGA	-57539611	True	NA	-47	True	NA	NA	NA	57547152	57530353	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57530776_57532014_57532107_57532571_57532644_57532732_57532811_57532983_57533023_57533237_57533304_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748_57535846_57546027_57546097_57547027
transcript_46989.known	chr12	+	3972	12	FSM	ENSG00000111087.10	ENST00000228682.7	3972	12	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_11	5.50131464378446	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATGCCACTTTATGTAT	57458290	True	NA	13	True	AATAAA	-20	NA	57459784	57472268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57460202_57463664_57463792_57463998_57464092_57464672_57464869_57465110_57465256_57465606_57465697_57465787_57465926_57466239_57466390_57467332_57467498_57467993_57468225_57469430_57469699_57470316
transcript_47.known	ERCC-00130	+	1051	1	FSM	ERCC-00130A	EF011072	1051	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12731	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1051	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00130_+_0_1100
transcript_47001.known	chr12	+	3394	10	FSM	ENSG00000111087.10	ENST00000543426.5	3394	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	9.33333333333333	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAAATACCATGCCACT	57460119	False	NA	5	True	AATAAA	-12	NA	57460134	57472260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57460202_57464672_57464869_57465110_57465256_57465606_57465697_57465787_57465926_57466239_57466390_57467332_57467498_57467993_57468225_57469430_57469699_57470316
transcript_47002.known	chr12	-	1673	11	FSM	ENSG00000123329.20	ENST00000552953.5	1673	11	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_10	5.88302643203309	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATGCAGTTCCTTTATT	-57476617	False	NA	-8	True	CATAAA	-17	NA	57476641	57472263	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57472689_57473602_57473709_57474041_57474177_57474422_57474477_57474625_57474704_57474874_57474974_57475290_57475399_57475482_57475616_57475832_57475932_57476070_57476455_57476589
transcript_47010.known	chr12	-	903	4	FSM	ENSG00000175197.13	ENST00000346473.8	903	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	11.5758369027902	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAGGTCTTTTACTTTTT	-57520010	True	NA	-9	True	ATTAAA	-15	NA	57520514	57516592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57517181_57517268_57517439_57517705_57517754_57520417
transcript_47012.known	chr12	-	951	3	FSM	ENSG00000175197.13	ENST00000552740.5	951	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTGGGAGCATCAGTCC	-57520007	True	NA	NA	False	NA	NA	NA	57520511	57516808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57517181_57517268_57517754_57520417
transcript_47013.known	chr12	+	2460	2	FSM	ENSG00000139269.3	ENST00000266646.3	2460	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTTGTGTTACAGTCTT	57455006	True	NA	33	True	NA	NA	NA	57455306	57458025	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57455835_57456093
transcript_47017.known	chr12	-	2042	2	FSM	ENSG00000287200.1	ENST00000656936.1	2042	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTAATCCCAGCTGCTC	-57462722	True	NA	NA	False	AATACA	-14	NA	57462818	57457595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57459562_57462742
transcript_47019.known	chr12	+	2797	21	FSM	ENSG00000166986.15	ENST00000262027.10	2797	21	0	0	0	0	multi-exon	FALSE	canonical	3	1315	junction_2	78.9716879647384	1793	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTGAGACCTTTCCTTT	57468934	True	NA	12	True	AATAAA	-22	NA	57488067	57516652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57488200_57489018_57489110_57489266_57489346_57489423_57489559_57489895_57489972_57490206_57490380_57490537_57490645_57498156_57498274_57498419_57498624_57500320_57500523_57504224_57504300_57511697_57511869_57512007_57512104_57512235_57512354_57512750_57512965_57514719_57514852_57514953_57515059_57515149_57515337_57515919_57515992_57516244_57516338_57516434
transcript_47020.known	chr12	-	1902	14	FSM	ENSG00000175203.17	ENST00000678521.1	1902	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	144.624508713807	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCCAGAGTTTCAAAATAT	-57539681	True	NA	-3	True	AATAAA	-18	NA	57547222	57530152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57530776_57532014_57532107_57532212_57532316_57532571_57532644_57532732_57532808_57532979_57533023_57533237_57533304_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748_57535846_57546027_57546097_57547027
transcript_47024.known	chr12	+	2876	11	FSM	ENSG00000166908.18	ENST00000540759.6	2876	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_10	52.8167587040326	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTACAGAAATGCCTT	57587777	True	NA	10	True	AATAAA	-15	NA	57591202	57603418	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57591464_57594024_57594123_57595125_57595223_57595887_57596032_57599064_57599212_57599399_57599439_57600323_57600438_57600810_57601079_57601244_57601349_57601525_57601637_57601925
transcript_47027.known	chr12	+	3176	10	FSM	ENSG00000166908.18	ENST00000354947.10	3176	10	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_6	18.2452429112053	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTACAGAAATGCCTT	57587766	True	NA	10	True	AATAAA	-15	NA	57591191	57603418	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57591464_57594024_57594123_57595125_57595223_57595887_57596032_57599064_57599212_57599399_57599439_57600323_57600438_57600810_57601079_57601244_57601349_57601525
transcript_47031.nic	chr12	+	3175	9	NIC	ENSG00000166908.18	novel	3176	10	NA	NA	-20	0	intron_retention	FALSE	canonical	3	30	junction_5	51.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTACAGAAATGCCTT	NA	False	NA	10	True	AATAAA	-15	NA	57591153	57603418	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_57591464_57594024_57594123_57595125_57595223_57595887_57596032_57599064_57599212_57600323_57600438_57600810_57601079_57601244_57601349_57601525
transcript_47032.known	chr12	+	1558	9	FSM	ENSG00000166908.18	ENST00000422156.7	1558	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	58.4502994004308	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAGGGGAAGGGGGTTGT	57587748	True	NA	NA	False	NA	NA	NA	57591173	57601926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57591464_57594024_57594123_57595125_57595223_57599064_57599212_57599399_57599439_57600323_57600438_57600810_57601079_57601244_57601349_57601525
transcript_4704.nic	chr1	+	615	5	ISM	ENSG00000133226.18	ENST00000468822.5	768	7	-96	2482	-93	0	5prime_fragment	FALSE	canonical	3	1387	junction_1	125.776339189849	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAAAAAGAAAGCAGCA	24615422	True	NA	31	True	GATAAA	-9	NA	24643178	24650032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970
transcript_47041.nic	chr12	+	2640	7	NIC	ENSG00000178498.16	novel	2028	7	NA	NA	-185	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	40.7171817404998	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGCCACACCCGTTCTT	NA	False	NA	17	True	AATAAA	-23	NA	57604436	57609800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_57604859_57605343_57605732_57606189_57606253_57606442_57606519_57606864_57607614_57608519_57608738_57609076
transcript_47043.known	chr12	+	2028	7	FSM	ENSG00000178498.16	ENST00000337737.8	2028	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	39.0828891232752	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCACACCCGTTCTTTT	57603058	True	NA	19	True	AATAAA	-25	NA	57604823	57609802	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57604859_57605570_57605732_57606189_57606253_57606442_57606519_57606864_57607614_57608519_57608738_57609076
transcript_47045.nic	chr12	+	2107	7	NIC	ENSG00000178498.16	novel	2067	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	53.429080720771	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGCCACACCCGTTCTT	57604560	False	NA	17	True	AATAAA	-23	NA	57604622	57609800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_57604859_57605988_57606030_57606189_57606253_57606442_57606519_57606864_57607614_57608519_57608738_57609076
transcript_47049.known	chr12	+	1840	6	FSM	ENSG00000178498.16	ENST00000551632.1	1840	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	52.3121400823939	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACACCCGTTCTTTTCC	57603068	True	NA	21	True	AATAAA	-27	NA	57604833	57609804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57604859_57606189_57606253_57606442_57606519_57606883_57607614_57608519_57608738_57609076
transcript_47055.nic	chr12	+	2213	5	ISM	ENSG00000178498.16	ENST00000548804.5	2067	6	193	0	-9	0	intron_retention	FALSE	canonical	3	35	junction_1	42.3460446795211	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGCCACACCCGTTCTT	57604792	False	NA	17	True	AATAAA	-23	NA	57604814	57609800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_57604859_57606189_57606253_57606442_57606519_57606864_57607614_57608519
transcript_4706.known	chr1	+	799	4	FSM	ENSG00000133226.18	ENST00000466910.5	799	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_3	718.178714991378	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATATGACCTTTTTGCA	24615515	True	NA	NA	False	NA	NA	NA	24643271	24647588	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_24643348_24645983_24646074_24646666_24646790_24647078
transcript_47067.known	chr12	+	569	3	FSM	ENSG00000178498.16	ENST00000550596.5	569	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	71	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATCAAAGTAAGCAAAAAGG	57604560	False	NA	NA	False	NA	NA	NA	57604622	57606511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57604859_57605988_57606253_57606442
transcript_47068.known	chr12	+	3199	5	FSM	ENSG00000178498.16	ENST00000548198.5	3199	5	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	14.2192651005599	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCACACCCGTTCTTTTC	57603058	True	NA	20	True	AATAAA	-26	NA	57604823	57609803	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57606253_57606442_57606519_57606864_57607614_57608519_57608738_57609076
transcript_47070.known	chr12	+	2246	16	FSM	ENSG00000240771.8	ENST00000333972.11	2246	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.498887651569859	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGGCTGCTGTCTTGGCA	57610162	True	NA	18	True	AATAAA	-16	NA	57610179	57617243	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57610316_57610569_57610685_57612929_57613145_57613263_57613360_57613439_57613517_57613693_57613761_57614015_57614120_57614330_57614401_57614515_57614606_57614688_57614782_57614966_57615018_57615236_57615315_57615511_57615713_57615836_57616018_57616283_57616496_57616783
transcript_47072.known	chr12	+	2103	16	FSM	ENSG00000240771.8	ENST00000616622.1	2103	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.489897948556636	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGAGGCTGCTGTCTTGGC	57611886	False	NA	17	True	AATAAA	-15	NA	57611912	57617242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57611992_57612755_57612897_57613040_57613145_57613263_57613360_57613439_57613517_57613693_57613761_57614015_57614120_57614330_57614401_57614515_57614606_57614688_57614782_57614966_57615018_57615236_57615315_57615511_57615713_57615836_57616018_57616283_57616496_57616783
transcript_47076.known	chr12	+	2554	15	FSM	ENSG00000240771.8	ENST00000286494.9	2554	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.494871659305393	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGCTGTCTTGGCAGA	57611152	True	NA	20	True	AATAAA	-18	NA	57611434	57617245	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57611992_57612929_57613145_57613263_57613360_57613439_57613517_57613693_57613761_57614015_57614120_57614330_57614401_57614515_57614606_57614688_57614782_57614966_57615018_57615236_57615315_57615511_57615713_57615836_57616018_57616283_57616496_57616783
transcript_4708.nic	chr1	+	587	4	ISM	ENSG00000133226.18	ENST00000468822.5	768	7	-135	3490	-132	137	5prime_fragment	FALSE	canonical	3	1387	junction_1	144.573702849293	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGGTAATAACCTTTTCT	24643117	False	NA	NA	False	AATAAA	-6	NA	24643139	24649024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858
transcript_47087.known	chr12	-	5368	11	FSM	ENSG00000135454.14	ENST00000341156.9	5368	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.41039415863879	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATAGTTTTGTGTTTTT	-57633127	True	NA	NA	False	NA	NA	NA	57633201	57623408	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57626962_57627617_57627859_57628121_57628263_57628712_57628904_57629047_57629147_57630151_57630333_57630477_57630519_57630979_57631087_57631199_57631365_57631914_57632134_57632771
transcript_47089.known	chr12	-	1967	6	FSM	ENSG00000135454.14	ENST00000550764.5	1967	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	2.72763633939717	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTTTGTTGTTTTTTCT	-57633128	True	NA	NA	False	AATAAA	-20	NA	57633202	57629328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57630333_57630477_57630519_57630979_57631087_57631199_57631365_57631914_57632134_57632771
transcript_4709.known	chr1	+	2624	4	FSM	ENSG00000133226.18	ENST00000462710.5	2624	4	0	0	0	0	multi-exon	FALSE	canonical	3	1387	junction_1	144.404524398187	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATCATACAATAGATGCAT	24615536	True	NA	85	True	AAAAAG	-44	NA	24643292	24650086	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_24643348_24645983_24646074_24646666_24649030_24649970
transcript_47095.known	chr12	+	2091	15	FSM	ENSG00000135506.16	ENST00000389146.10	2091	15	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_11	126.500060498493	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGACCTCTCGGGCAAC	57687156	True	NA	NA	False	NA	NA	NA	57694144	57721024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57694324_57694749_57694927_57695779_57695844_57695961_57696039_57696274_57696374_57715759_57715971_57716091_57716194_57716411_57716513_57716692_57716745_57717869_57717959_57718145_57718377_57718992_57719183_57720098_57720264_57720405_57720519_57720783
transcript_47096.known	chr12	+	2682	15	FSM	ENSG00000135506.16	ENST00000315970.12	2682	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	170.349296015749	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCAACCTTTTTTGTGG	57687143	True	NA	19	True	AATAAA	-16	NA	57694131	57721557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57694324_57694749_57694927_57695779_57695844_57695961_57696039_57696274_57696374_57715759_57715971_57716091_57716194_57716411_57716513_57716692_57716745_57717869_57717959_57718145_57718422_57718992_57719183_57720098_57720264_57720405_57720519_57720783
transcript_471.known	chr1	-	2455	8	FSM	ENSG00000160087.21	ENST00000450390.6	2455	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	252.351229157187	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCTGCTTGTGTCTGTGT	-1264090	True	NA	-1	True	AAAAAG	-31	NA	1273853	1253908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1255488_1256044_1256126_1256991_1257131_1257207_1257311_1263345_1263387_1266097_1266291_1267861_1267993_1273665
transcript_47102.known	chr12	+	2457	14	FSM	ENSG00000135506.16	ENST00000389142.9	2457	14	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_11	110.777563789123	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCAACCTTTTTTGTGG	57687158	True	NA	19	True	AATAAA	-16	NA	57694146	57721557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57694324_57694749_57694927_57695779_57695844_57695961_57696039_57696274_57696374_57715759_57715971_57716091_57716194_57716411_57716513_57716692_57716745_57717869_57717959_57718145_57718377_57718992_57719183_57720405_57720519_57720783
transcript_47104.known	chr12	+	2505	14	FSM	ENSG00000135506.16	ENST00000257966.12	2505	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	186.994098568399	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCATCAACCTTTTTTGT	57687156	True	NA	17	True	AATAAA	-14	NA	57694144	57721555	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57694324_57694749_57694927_57695779_57695844_57695961_57696039_57696274_57696374_57715759_57715971_57716088_57716194_57716411_57716513_57716692_57716745_57717869_57717959_57718145_57718422_57718992_57719183_57720405_57720519_57720783
transcript_47121.known	chr12	+	2246	13	FSM	ENSG00000135506.16	ENST00000551035.5	2246	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	229.55167658334	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTACAATTTGTGCTTCTG	57687156	True	NA	NA	False	NA	NA	NA	57694144	57721395	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57694324_57694749_57694927_57695779_57695844_57695961_57696039_57715759_57715971_57716088_57716194_57716411_57716513_57716692_57716745_57717869_57717959_57718145_57718422_57718992_57719183_57720405_57720519_57720783
transcript_47129.known	chr12	+	2135	14	FSM	ENSG00000135506.16	ENST00000552285.5	2135	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	164.320440300626	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCCAAACAGCAGAGTGGA	NA	False	NA	NA	False	NA	NA	NA	57693954	57720998	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57694324_57694749_57694927_57695779_57695844_57695961_57696039_57696274_57696374_57715759_57715971_57716091_57716194_57716411_57716513_57716692_57716745_57717869_57717959_57718145_57718422_57718992_57719183_57720405_57720519_57720783
transcript_47143.known	chr12	-	1865	8	FSM	ENSG00000135446.17	ENST00000257904.11	1865	8	0	0	0	0	multi-exon	FALSE	canonical	3	1251	junction_5	44.5114064720769	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACTTTTATATTCGCTA	-57730187	True	NA	NA	False	AATATA	-15	NA	57752310	57747726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57748618_57749181_57749318_57749453_57749505_57750655_57750766_57750922_57751091_57751206_57751343_57751499_57751737_57752174
transcript_47146.known	chr12	-	776	7	FSM	ENSG00000135446.17	ENST00000546489.5	776	7	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_6	460.520870560958	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATCTCTGCCTTTCGAGC	-57730199	True	NA	NA	False	NA	NA	NA	57752322	57748590	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57748618_57749181_57749318_57749453_57749505_57750655_57750766_57750922_57751091_57751206_57751343_57752174
transcript_47150.known	chr12	+	820	6	FSM	ENSG00000135452.10	ENST00000553089.5	820	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	89.0878218389023	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTGATACTTATCTCTC	57743185	True	NA	NA	False	NA	NA	NA	57745038	57747178	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57745218_57745744_57745913_57746175_57746257_57746349_57746449_57746588_57746721_57747017
transcript_47151.known	chr12	+	1100	6	FSM	ENSG00000135452.10	ENST00000549052.5	1100	6	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_3	70.2839953332194	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACCAAGAACTCTTTCCT	57743196	True	NA	NA	False	NA	NA	NA	57745049	57747656	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57745218_57745744_57745913_57746175_57746257_57746592_57746721_57747017_57747132_57747215
transcript_47156.nic	chr12	+	1811	5	ISM	ENSG00000135452.10	ENST00000257910.8	3678	6	-33	1984	-17	17	intron_retention	FALSE	canonical	3	182	junction_1	5.97390157267426	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCATTATTTCTTTGTTTT	57743152	True	NA	NA	False	ATTAAA	-12	NA	57745005	57748235	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_57745218_57745744_57745913_57746175_57746257_57746588_57746721_57747017
transcript_47158.known	chr12	+	3434	4	FSM	ENSG00000135452.10	ENST00000547992.5	3434	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	88.2471277467746	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGGGATATGAAGTTCCT	57743169	True	NA	NA	False	AATAAA	-45	NA	57745022	57750211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57745218_57745744_57745874_57747017_57747132_57747215
transcript_47159.known	chr12	+	475	4	FSM	ENSG00000135452.10	ENST00000547472.5	475	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	83.973540806349	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGATCCTTCTGACTTT	57743212	True	NA	NA	False	NA	NA	NA	57745065	57747292	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57745218_57746588_57746721_57747017_57747132_57747215
transcript_47160.known	chr12	+	1500	2	FSM	ENSG00000255737.2	ENST00000542466.2	1500	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCACATTTTGCGCTTG	57726158	True	NA	16	True	TATAAA	-28	NA	57726270	57728356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57726379_57726964
transcript_47162.known	chr12	-	2372	9	FSM	ENSG00000111012.10	ENST00000228606.9	2372	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	7.3474060048428	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGACTTATTTCTCTCAT	-57763262	False	3816	1	True	AATAAA	-20	NA	57767078	57762333	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57763256_57763610_57763809_57764097_57764177_57764377_57764551_57764753_57764927_57765010_57765212_57765296_57765500_57766006_57766198_57766846
transcript_47168.known	chr12	+	897	7	FSM	ENSG00000123297.20	ENST00000550559.5	897	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	217.31288247338	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATGAGTCACCAGGGCTG	57777743	True	NA	NA	False	NA	NA	NA	57782786	57802774	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57782859_57783109_57783284_57786162_57786292_57787039_57787163_57792985_57793074_57802173_57802265_57802554
transcript_47176.known	chr12	+	1997	6	FSM	ENSG00000123297.20	ENST00000652027.2	1997	6	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_1	27.2132320755915	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTCTTTCTTTTG	57777743	True	NA	16	True	ATTAAA	-32	NA	57782786	57797587	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57782859_57783109_57783284_57786162_57786292_57787039_57787163_57792985_57793074_57796176
transcript_47177.known	chr12	+	651	6	FSM	ENSG00000123297.20	ENST00000543727.5	651	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	186.642974686968	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCTCTAAGCACCTTAAAA	57777755	True	NA	NA	False	NA	NA	NA	57782798	57802631	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57782859_57783109_57783284_57786162_57786292_57787039_57787163_57792985_57793074_57802554
transcript_47178.known	chr12	+	689	6	FSM	ENSG00000123297.20	ENST00000457189.1	689	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	184.536825593159	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAATGCAGAGTCCCTCAC	57777774	True	NA	NA	False	NA	NA	NA	57782817	57796261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57782908_57783109_57783284_57786162_57786292_57787039_57787163_57792985_57793074_57796176
transcript_4718.known	chr1	+	4253	6	FSM	ENSG00000169504.15	ENST00000374379.9	4253	6	0	0	0	0	multi-exon	FALSE	canonical	3	2230	junction_2	116.105813807923	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGAGACTACTATTTT	24689218	True	NA	12	True	AATAAA	-19	NA	24745446	24844321	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_24745626_24797741_24797852_24814093_24814220_24827009_24827117_24839859_24840042_24840772
transcript_47180.known	chr12	-	1378	6	FSM	ENSG00000037897.17	ENST00000324871.12	1378	6	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_4	23.004347415217	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTCTCTGGAGAGTCC	-57768289	True	NA	88	True	NA	NA	NA	57772105	57768470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57769152_57769302_57769405_57769564_57769679_57769771_57769957_57771093_57771258_57771973
transcript_47185.known	chr12	+	1085	5	FSM	ENSG00000123297.20	ENST00000651899.1	1085	5	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	235.990465909113	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTAATACTGGATTTAGCTT	57777732	True	NA	19	True	AATAAA	-21	NA	57782775	57796733	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57782878_57783109_57783284_57786162_57786292_57787039_57787163_57796176
transcript_47189.known	chr12	-	1096	5	FSM	ENSG00000037897.17	ENST00000257848.7	1096	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	110.907619215273	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTATTCTGCCATTTCTC	-57768303	True	NA	-23	True	NA	NA	NA	57772119	57768581	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57769152_57769302_57769405_57769564_57769679_57771093_57771258_57771973
transcript_47198.known	chr12	+	2762	4	FSM	ENSG00000123427.17	ENST00000333012.5	2762	4	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_2	1.24721912892465	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTGTTGTTGTTTTG	57772537	False	NA	4	True	AATAAA	-19	NA	57772677	57782541	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57772902_57773016_57773129_57774628_57774768_57780254
transcript_47206.known	chr12	+	836	3	FSM	ENSG00000123427.17	ENST00000551420.1	836	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	7.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTTTGTTACCCCAGATA	57772159	False	NA	NA	False	AAAAAG	-37	NA	57772199	57780780	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57772398_57773016_57773129_57780254
transcript_47208.known	chr12	+	2687	3	FSM	ENSG00000123427.17	ENST00000300209.13	2687	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	1	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTGTTGTTGTTTTG	57772473	True	NA	4	True	AATAAA	-19	NA	57772613	57782541	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57772902_57773016_57773129_57780254
transcript_4721.known	chr1	-	1757	7	FSM	ENSG00000117614.10	ENST00000236273.9	1757	7	0	0	0	0	multi-exon	TRUE	canonical	3	542	junction_6	59.2977421342687	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGGATATTTTAAATTCAA	-25222161	True	NA	NA	False	ATTAAA	-15	NA	25232502	25222275	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_25223432_25225001_25225101_25227441_25227533_25228117_25228236_25228997_25229124_25232103_25232212_25232443
transcript_47213.nic	chr12	-	4677	8	NIC	ENSG00000175215.11	novel	4785	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_2	108.453695564663	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCTGCCACCAACCTT	-57841199	True	NA	-4	True	AATAAA	-28	NA	57846705	57819926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_57823728_57823903_57824006_57824226_57824320_57826345_57826403_57826995_57827098_57827551_57827591_57829447_57829597_57846371
transcript_47214.known	chr12	-	988	8	FSM	ENSG00000175215.11	ENST00000547701.5	988	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	113.2742743278	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCTTAGATGCCGAGTG	-57845496	False	NA	NA	False	NA	NA	NA	57845534	57823460	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57823728_57823903_57824090_57824226_57824320_57826345_57826403_57826995_57827098_57827551_57827591_57829447_57829597_57845439
transcript_47215.known	chr12	-	4785	8	FSM	ENSG00000175215.11	ENST00000398073.7	4785	8	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_5	21.7827866885384	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCTGCCACCAACCTT	-57841223	True	NA	-4	True	AATAAA	-28	NA	57846729	57819926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57823728_57823903_57824090_57824226_57824320_57826345_57826403_57826995_57827098_57827551_57827591_57829447_57829597_57846371
transcript_47216.known	chr12	-	900	8	FSM	ENSG00000175215.11	ENST00000551594.1	900	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	115.088076298644	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGGAGCAGAGGACGTCTA	-57846506	False	NA	NA	False	NA	NA	NA	57846544	57823652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57823728_57823903_57824090_57824226_57824320_57826345_57826403_57826995_57827124_57827551_57827591_57829447_57829597_57846371
transcript_47234.known	chr12	+	610	2	FSM	ENSG00000257953.1	ENST00000549683.1	610	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGGCAGGAGGAGGAGCC	57837066	True	NA	NA	False	NA	NA	NA	57837091	57842745	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57837215_57842258
transcript_47235.known	chr12	+	3134	6	FSM	ENSG00000166896.9	ENST00000300145.4	3134	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	7.19444229944198	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGACAAGGTCTTCAAATT	NA	False	NA	NA	False	AATAGA	-34	NA	57941566	57959148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_57941889_57945627_57945674_57946994_57947077_57951757_57951896_57953605_57953690_57956686
transcript_4724.known	chr1	-	926	6	FSM	ENSG00000117614.10	ENST00000354361.3	926	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	265.523633599723	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCATTTTGGGCTTAAGA	-25222145	True	NA	18	True	TTTAAA	-23	NA	25232486	25222964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_25223432_25225001_25225101_25227441_25227533_25228117_25228236_25232103_25232212_25232443
transcript_47240.known	chr12	-	2214	3	FSM	ENSG00000257698.3	ENST00000659090.1	2214	3	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	7.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAATATATGTTGATACAA	NA	False	NA	NA	False	AAAACA	-42	NA	57936345	57930114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57931738_57935469_57935554_57935838
transcript_47241.known	chr12	-	672	3	FSM	ENSG00000257698.3	ENST00000664635.1	672	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	52	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACATTTCTTTTTTTCTC	NA	False	NA	71	True	ATTAAA	-1	NA	57936122	57931452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57931738_57935469_57935573_57935838
transcript_47242.known	chr12	-	495	4	FSM	ENSG00000257698.3	ENST00000667438.1	495	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	43.5660418215839	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACCTTGGGTTTTACCTG	NA	False	NA	-4	True	AATAAA	-14	NA	57936175	57931527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_57931738_57935469_57935554_57935838_57935915_57936050
transcript_47243.known	chr12	-	4046	19	FSM	ENSG00000139263.12	ENST00000320743.8	4046	19	0	0	0	0	multi-exon	TRUE	canonical	3	33	junction_13	8.10673397876538	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCAAGCCCCATTTATACA	-58920175	False	NA	-19	True	AATAAA	-15	NA	58920504	58872154	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_58872817_58874054_58874331_58874429_58874574_58876444_58876604_58877399_58877853_58878823_58879106_58880580_58880902_58882868_58883033_58883519_58883592_58885830_58885903_58886809_58886891_58887788_58887933_58888328_58888473_58888818_58888963_58889995_58890140_58890664_58890797_58913981_58914057_58914264_58914337_58919999
transcript_47266.nnic	chr12	-	1971	2	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	51	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTATTTAAATTTGTGTA	-59297187	True	NA	-9	True	AATAAA	-15	NA	59328609	59319260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr12_-_59320979_59328356
transcript_47269.nnic	chr12	-	1676	2	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	51	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGTGTGCTTTCTTTCT	-59297187	True	NA	0	True	AATATA	-26	NA	59328609	59319555	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr12_-_59320979_59328356
transcript_47271.nnic	chr12	-	3110	2	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	133	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTCCCTAATGGCCTC	-59297187	True	NA	-1	True	AGTAAA	-20	NA	59328609	59320075	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr12_-_59320979_59326402
transcript_47273.nnic	chr12	-	1156	2	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	51	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTCCCTAATGGCCTC	-59297187	True	NA	-1	True	AGTAAA	-20	NA	59328609	59320075	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr12_-_59320979_59328356
transcript_47276.nnic	chr12	-	1082	2	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	51	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTACCAACTCTTAATGT	-59297187	True	NA	-19	True	ATTAAA	-21	NA	59328609	59320149	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr12_-_59320979_59328356
transcript_47278.nnic	chr12	-	602	2	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	51	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGATAGCCTTTTCAAATG	-59297187	True	NA	-19	True	TATAAA	-21	NA	59328609	59320629	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr12_-_59320979_59328356
transcript_47280.nnic	chr12	-	605	2	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	105	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTGATTTTTCTTCCC	-59297187	True	NA	0	True	AATAAA	-32	NA	59328609	59321831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr12_-_59322184_59328356
transcript_47282.nnic	chr12	-	513	2	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	105	junction_1	0	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGTCTTTTTTATTTG	-59297187	True	NA	-9	True	AATAAA	-13	NA	59328609	59321923	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr12_-_59322184_59328356
transcript_47284.known	chr12	+	11936	6	FSM	ENSG00000118596.12	ENST00000547379.6	11936	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	1.93907194296653	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTGAAATGAAATCTATA	59595826	True	NA	NA	False	AATAAA	-16	NA	59596028	59789841	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_59596237_59655151_59655251_59704771_59705019_59771218_59771363_59774656_59775476_59779422
transcript_47285.known	chr12	+	2250	6	FSM	ENSG00000118596.12	ENST00000552432.5	2250	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.00665927567458	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAATTTATTTTTAAGGT	59595864	True	NA	NA	False	AATAAA	-22	NA	59596066	59780213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_59596237_59655151_59655251_59704791_59705019_59771218_59771363_59774656_59775476_59779422
transcript_47288.known	chr12	+	14971	22	FSM	ENSG00000135655.16	ENST00000280377.10	14971	22	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_7	32.2262410504995	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAAGCTTTATTGTGTT	62256255	True	NA	NA	False	ATTAAA	-15	NA	62260403	62416389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_62260504_62294178_62294307_62302789_62302921_62314789_62314917_62321463_62321610_62325871_62325934_62349220_62349308_62355330_62355476_62381489_62381664_62383839_62383999_62384077_62384303_62389430_62389515_62389604_62389700_62389796_62389989_62390863_62390980_62391156_62391430_62391815_62391887_62392271_62392388_62393052_62393203_62396294_62396399_62401186_62401276_62404192
transcript_47289.known	chr12	+	14950	21	FSM	ENSG00000135655.16	ENST00000353364.7	14950	21	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_6	30.9845122601599	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAAGCTTTATTGTGTT	62256189	True	NA	NA	False	ATTAAA	-15	NA	62260337	62416389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_62260504_62294178_62294307_62302789_62302921_62314789_62314917_62321463_62321610_62325871_62325934_62355330_62355476_62381489_62381664_62383839_62383999_62384077_62384303_62389430_62389515_62389604_62389700_62389796_62389989_62390863_62390980_62391156_62391430_62391815_62391887_62392271_62392388_62393052_62393203_62396294_62396399_62401186_62401276_62404192
transcript_4729.nic	chr1	-	307	3	ISM	ENSG00000117614.10	ENST00000236273.9	1757	7	-31	6739	-31	0	5prime_fragment	FALSE	canonical	3	542	junction_2	72.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAGGAAAAGAAAAAGGTT	-25222192	True	NA	NA	False	AAAAAG	-25	NA	25232533	25229014	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_25229124_25232103_25232212_25232443
transcript_47294.known	chr12	+	2226	7	FSM	ENSG00000135655.16	ENST00000312635.10	2226	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_6	58.6138493304555	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGTTTTTTATTTTTGA	62256248	True	NA	NA	False	AATAAA	-15	NA	62260396	62336690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_62260504_62294178_62294307_62302789_62302921_62314789_62314917_62321463_62321610_62325871_62325934_62335165
transcript_47296.known	chr12	+	584	6	FSM	ENSG00000135655.16	ENST00000549523.5	584	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	85.155387380952	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTCAGTATTCCAGATGA	62256207	True	NA	23	True	AAGAAA	-2	NA	62260355	62321489	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_62260504_62294178_62294307_62302789_62302921_62312285_62312310_62314789_62314917_62321463
transcript_47297.known	chr12	+	579	4	FSM	ENSG00000135655.16	ENST00000537297.2	579	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	84.1704619606348	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACTAATAATATGGAAAT	62256259	True	NA	NA	False	ATTAAA	-21	NA	62260407	62304896	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_62260504_62294178_62294307_62302789_62302921_62304672
transcript_47298.known	chr12	+	648	4	FSM	ENSG00000135655.16	ENST00000548524.5	648	4	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_3	4.08248290463863	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTCTTGTATGCTTTTG	62256250	True	NA	NA	False	NA	NA	NA	62260398	62315073	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_62260504_62294178_62294307_62302789_62302921_62314789
transcript_47299.known	chr12	+	1022	3	FSM	ENSG00000135655.16	ENST00000551206.5	1022	3	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_2	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTCCCCCGACCCTCC	62256258	True	NA	NA	False	NA	NA	NA	62260406	62303586	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_62260504_62294178_62294307_62302789
transcript_47300.known	chr12	+	559	2	FSM	ENSG00000135655.16	ENST00000546718.5	559	2	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATTAAATAATTAAACACT	62256258	True	NA	NA	False	ACTAAA	-20	NA	62260406	62294640	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_62260504_62294178
transcript_47301.known	chr12	+	13263	35	FSM	ENSG00000061987.16	ENST00000393630.8	13263	35	0	0	0	0	multi-exon	TRUE	canonical	3	51	junction_7	29.5574626552402	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGTTTAGACCCTGTTT	62463122	True	NA	NA	False	ATTAAA	-18	NA	62466825	62600476	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_62467319_62484169_62484234_62493914_62494043_62495015_62495148_62498918_62499049_62500782_62500881_62501572_62501699_62508285_62508481_62524514_62524640_62525083_62525221_62525948_62526103_62532437_62532671_62534844_62534927_62535524_62535710_62537150_62537264_62537601_62537707_62538095_62538177_62538251_62538326_62538414_62538506_62543096_62543199_62544897_62545009_62546896_62547073_62549667_62549831_62552880_62553175_62555993_62556193_62560490_62561114_62565236_62565381_62566013_62566032_62566321_62566451_62571391_62571583_62578444_62578506_62580296_62580421_62585293_62585502_62588073_62588157_62592585
transcript_47303.known	chr12	+	5612	34	FSM	ENSG00000061987.16	ENST00000393629.6	5612	34	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_27	30.5117358384461	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTTTAAATTCTACTTAC	62463144	True	NA	NA	False	NA	NA	NA	62466847	62592865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_62467319_62484169_62484234_62493914_62494043_62495015_62495148_62498918_62499049_62500782_62500881_62501572_62501699_62508285_62508481_62524514_62524640_62525083_62525221_62525948_62526103_62532437_62532671_62534844_62534927_62535524_62535710_62537150_62537264_62537601_62537707_62538095_62538177_62538251_62538326_62538414_62538506_62543096_62543199_62544897_62545009_62546896_62547073_62549667_62549831_62552880_62553175_62555993_62556193_62560490_62561114_62565236_62565381_62566321_62566451_62571391_62571583_62578444_62578506_62580296_62580421_62585293_62585502_62588073_62588157_62592585
transcript_47307.known	chr12	+	3760	24	FSM	ENSG00000061987.16	ENST00000552115.5	3760	24	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_7	13.5244649845786	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTTTCTGTCTTCATC	62463145	True	NA	NA	False	ATTAAA	-15	NA	62466848	62553365	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_62467319_62484169_62484234_62493914_62494043_62495015_62495148_62498918_62499049_62500782_62500881_62501572_62501699_62508285_62508481_62524514_62524640_62525083_62525221_62525948_62526103_62532437_62532671_62534844_62534927_62535524_62535710_62537150_62537264_62537601_62537707_62538095_62538177_62538251_62538326_62538414_62538506_62543096_62543199_62544897_62545009_62546896_62547073_62549667_62549831_62552880
transcript_47311.known	chr12	-	1940	1	FSM	ENSG00000221949.6	ENST00000408887.3	1940	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTTCTATTCTACAT	NA	False	NA	NA	False	ATTAAA	-16	NA	62603690	62601750	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_62601800_62603700
transcript_47312.known	chr12	-	6454	10	FSM	ENSG00000111110.12	ENST00000228705.7	6454	10	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_6	10.1446330760118	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCAGCAAAACTTTTTTC	-62933246	True	NA	-8	True	AATAAA	-26	NA	62935150	62643993	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_62648637_62667177_62667330_62689698_62689807_62693935_62694000_62720170_62720290_62737501_62737587_62788225_62788339_62801815_62802161_62832113_62832280_62934491
transcript_47319.known	chr12	+	645	1	FSM	ENSG00000139239.7	ENST00000484568.1	645	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	225	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGTGGCAATCATAAAAAG	62964822	True	NA	NA	False	AAGAAA	-4	NA	62965324	62965969	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_62965300_62966000
transcript_47320.known	chr12	+	1599	7	FSM	ENSG00000118600.13	ENST00000543342.5	1599	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	42.8385210866212	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGCTAACATGTGATTTT	63778330	True	NA	7	True	AATAAA	-15	NA	63779865	63809100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_63780130_63781018_63781175_63782540_63782705_63784969_63785073_63802090_63802406_63805233_63805405_63808674
transcript_47323.known	chr12	+	1854	6	FSM	ENSG00000118600.13	ENST00000261234.11	1854	6	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_3	8.26075057122535	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGAGGTTTAATTGGCT	63778373	True	NA	90	True	AATAAA	-26	NA	63779908	63809562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_63780130_63781018_63781175_63784969_63785073_63802090_63802406_63805233_63805405_63808674
transcript_47325.known	chr12	+	1966	6	FSM	ENSG00000118600.13	ENST00000537373.6	1966	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	28.4014084157811	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGAAGAGAGGTTTAATT	63779904	True	NA	86	True	AATAAA	-22	NA	63780125	63809558	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_63780463_63781018_63781175_63784969_63785073_63802090_63802406_63805233_63805405_63808674
transcript_47327.known	chr12	+	864	3	FSM	ENSG00000118600.13	ENST00000536219.5	864	3	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGGAGGAATAATATGTAAA	63778306	True	NA	NA	False	AAAACA	-10	NA	63779841	63785389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_63780130_63781018_63781175_63784969
transcript_47331.known	chr12	+	22920	22	FSM	ENSG00000196935.9	ENST00000355086.8	22920	22	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_11	6.17911044533852	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAATTATACCTCAATAA	63844679	True	NA	NA	False	AATAAA	-19	NA	63844699	64162217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_63844884_63983946_63984143_63989909_63990073_64016949_64017013_64042789_64042973_64043446_64043576_64062916_64063139_64065117_64065220_64078918_64079117_64080285_64080371_64086998_64087027_64091275_64091379_64094931_64094993_64095126_64095205_64097240_64097376_64108931_64109038_64111761_64111987_64115813_64115894_64125976_64126158_64127589_64127725_64127860_64128201_64142294
transcript_47332.known	chr12	+	8406	22	FSM	ENSG00000196935.9	ENST00000631006.2	8406	22	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_11	6.55795720640875	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTTGTCTGCTTCCAGT	63844740	False	NA	4	True	AATAAA	-16	NA	63844760	64147833	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_63844884_63983946_63984143_63989909_63990073_64016949_64017013_64042789_64042973_64043446_64043576_64062916_64063139_64065117_64065220_64078918_64079117_64080285_64080371_64086998_64087027_64091892_64091927_64094931_64094993_64095126_64095205_64097240_64097376_64108931_64109038_64111761_64111987_64115813_64115894_64125976_64126158_64127589_64127725_64127860_64128201_64142294
transcript_47336.nic	chr12	+	1698	5	ISM	ENSG00000196935.9	ENST00000537556.1	2976	10	-1012	38952	-909	-655	5prime_fragment	FALSE	canonical	3	21	junction_1	3.77491721763537	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTAAAGAGATTGCAGA	NA	False	NA	NA	False	AAGAAA	-22	NA	63843790	64042972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_63844884_63983946_63984143_63989909_63990073_64016949_64017013_64042789
transcript_47337.known	chr12	-	2698	4	FSM	ENSG00000174206.13	ENST00000311915.12	2698	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	21.6384431561566	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAGATGTAAGTGTTTTT	-64221176	True	NA	NA	False	ATTAAA	-15	NA	64222265	64186315	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_64187653_64193846_64194659_64215677_64215964_64222002
transcript_47338.known	chr12	-	4159	3	FSM	ENSG00000174206.13	ENST00000398055.8	4159	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	13	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGCAGACTGCTTTCT	-64221207	True	NA	-8	True	ATTAAA	-17	NA	64222296	64191079	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_64194659_64215677_64215964_64222002
transcript_47341.known	chr12	-	574	1	FSM	ENSG00000174206.13	ENST00000615991.1	574	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTCTTCATTGTTTTAA	-64221183	True	NA	NA	False	CATAAA	-17	NA	64222272	64221698	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_64221700_64222300
transcript_47342.known	chr12	-	2441	3	FSM	ENSG00000174206.13	ENST00000544871.1	2441	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	17	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTTGTTACTGGTTTGA	-64221207	True	NA	-3	True	AATAAA	-20	NA	64222296	64192638	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_64194659_64215677_64215964_64222161
transcript_47351.known	chr12	-	1059	8	FSM	ENSG00000185306.13	ENST00000536975.5	1059	8	0	0	0	0	multi-exon	TRUE	canonical	3	6	junction_5	9.84782167977948	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCAAAGATCTTTATGC	-64293199	True	NA	NA	False	AATAAA	-16	NA	64293383	64266982	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_64267289_64270535_64270715_64274900_64274976_64275297_64275373_64277679_64277804_64284663_64284754_64285953_64286061_64293280
transcript_47352.known	chr12	-	935	7	FSM	ENSG00000185306.13	ENST00000542397.5	935	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	6.40312423743285	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCAAAGATCTTTATGC	-64293199	True	NA	NA	False	AATAAA	-16	NA	64293383	64266982	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_64267289_64270535_64270715_64274900_64274976_64275297_64275373_64284663_64284754_64285953_64286061_64293280
transcript_4736.nic	chr1	-	2055	6	NIC	ENSG00000117616.18	novel	3034	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	12	junction_2	38.2695701569798	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTAGTCTTTATTGTATA	-25243914	True	NA	-30	True	AATAAA	-14	NA	25247454	25242254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_25242706_25243549_25244225_25244453_25244499_25245149_25245302_25246443_25247030_25247308
transcript_47367.known	chr12	+	6370	25	FSM	ENSG00000184575.12	ENST00000332707.10	6370	25	0	0	0	0	multi-exon	FALSE	canonical	1	334	junction_6	176.34010206763	338	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTAGAGTGGACTTTTG	64391505	True	NA	15	True	AATAAA	-20	NA	64404391	64451125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_64404805_64409961_64410096_64414906_64414990_64416697_64416755_64418045_64418116_64418875_64419095_64420069_64420255_64420352_64420522_64421234_64421472_64423004_64423044_64423181_64423245_64424598_64424724_64425037_64425183_64425337_64425458_64425814_64425910_64428050_64428121_64430048_64430288_64431537_64431824_64433413_64433604_64434506_64434624_64434793_64434910_64435626_64435675_64439243_64439316_64445074_64445132_64448104
transcript_4737.nic	chr1	-	2123	6	NIC	ENSG00000117616.18	novel	1425	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	33	junction_1	31.0199935525461	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTTTTGTATATTTAAT	-25243914	True	NA	-66	True	AATGAA	-30	NA	25247454	25242290	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_25242414_25242538_25242706_25243549_25244499_25245149_25245302_25246443_25247030_25247308
transcript_4738.nic	chr1	-	2392	5	NIC	ENSG00000117616.18	novel	1425	5	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	47.0903387118844	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTAGTCTTTATTGTATA	-25243914	True	NA	-30	True	AATAAA	-14	NA	25247454	25242254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_25242706_25243549_25243634_25244176_25245302_25246443_25247030_25247308
transcript_4739.known	chr1	-	1425	5	FSM	ENSG00000117616.18	ENST00000243189.12	1425	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	33.3691474269272	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTATTGTATATATATA	-25243914	True	NA	-24	True	AATAAA	-20	NA	25247454	25242248	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_25242706_25243549_25243634_25245149_25245302_25246443_25247030_25247308
transcript_47396.known	chr12	+	3507	5	FSM	ENSG00000153179.13	ENST00000542104.6	3507	5	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_2	13.2169398878863	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTATGTGTGTTTATT	64604894	True	NA	13	True	ATTAAA	-15	NA	64610494	64697564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_64610744_64684786_64684895_64688215_64688454_64691469_64691580_64694762
transcript_4740.known	chr1	-	2013	5	FSM	ENSG00000117616.18	ENST00000568254.5	2013	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	45.8005185560164	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTAGTCTTTATTGTATA	-25243917	True	NA	-30	True	AATAAA	-14	NA	25247457	25242254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_25242706_25243549_25244225_25245149_25245302_25246443_25247030_25247308
transcript_47400.known	chr12	+	3092	22	FSM	ENSG00000183735.11	ENST00000652537.1	3092	22	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_15	58.2159168142317	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATATTTCTTTAATTCTG	64448431	True	NA	-51	True	ATTAAA	-30	NA	64452091	64502048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_64452188_64455839_64455958_64460188_64460330_64464333_64464464_64466900_64467083_64474229_64474391_64480011_64480123_64481841_64482022_64484302_64484500_64485454_64485514_64485925_64486018_64488486_64488589_64490040_64490120_64495482_64495605_64495698_64495776_64495981_64496090_64496366_64496407_64496948_64497051_64497162_64497260_64497647_64497755_64497967_64498040_64501329
transcript_47401.known	chr12	+	3022	21	FSM	ENSG00000183735.11	ENST00000331710.10	3022	21	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_12	14.2302494707577	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTCATGTGTTTCTTTGT	64448459	True	NA	15	True	AATAAA	-21	NA	64452119	64502114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_64452188_64455839_64455958_64460188_64460330_64464333_64464464_64466900_64467083_64474229_64474391_64480011_64480123_64481841_64482022_64484302_64484500_64485454_64485514_64485925_64486018_64488486_64488589_64490040_64490120_64495482_64495605_64495698_64495776_64496366_64496407_64496948_64497051_64497162_64497260_64497647_64497755_64497967_64498040_64501329
transcript_47402.known	chr12	+	2902	20	FSM	ENSG00000183735.11	ENST00000651262.1	2902	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	46.9563951671273	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTATTTCATGGAAAAAAAT	64448459	True	NA	-28	True	NA	NA	NA	64452119	64502071	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_64452188_64455839_64455958_64460188_64460330_64464333_64464464_64466900_64467083_64474229_64474391_64480011_64480123_64481841_64482022_64484302_64484500_64485454_64485514_64485925_64486018_64488486_64488589_64490040_64490120_64495482_64495605_64496366_64496407_64496948_64497051_64497162_64497260_64497647_64497755_64497967_64498040_64501329
transcript_47403.nic	chr12	+	2373	19	ISM	ENSG00000183735.11	ENST00000676654.1	3204	20	-11	4132	-11	662	5prime_fragment	FALSE	canonical	3	165	junction_12	14.7490321925638	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGCATACTGTTTTTGA	64448418	True	NA	NA	False	AATAAA	-21	NA	64452078	64497921	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_64452188_64455839_64455958_64460188_64460330_64464333_64464464_64466900_64467083_64474229_64474391_64480011_64480123_64481841_64482022_64484302_64484500_64485454_64485514_64485925_64486018_64488486_64488589_64490040_64490120_64495482_64495605_64495698_64495776_64496366_64496407_64496948_64497051_64497162_64497260_64497647
transcript_47405.known	chr12	+	1075	2	FSM	ENSG00000183735.11	ENST00000679065.1	1075	2	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTTGTTTAGATTCAAT	64448468	True	NA	NA	False	ATTAAA	-14	NA	64452128	64456855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_64452188_64455839
transcript_47406.known	chr12	+	1261	4	FSM	ENSG00000183735.11	ENST00000678430.1	1261	4	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	13.8804418757713	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTGGCAAGAATATGGAG	64448459	True	NA	NA	False	AAAACA	-2	NA	64452119	64465267	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_64452188_64455839_64455958_64460188_64460330_64464333
transcript_47407.known	chr12	+	3001	21	FSM	ENSG00000183735.11	ENST00000677641.1	3001	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	45.8215015031153	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTACTATTTCATGGAAA	64448429	True	NA	-33	True	NA	NA	NA	64452089	64502066	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_64452188_64455839_64455958_64460188_64460330_64464333_64464464_64466900_64467083_64474229_64474391_64480011_64480123_64481841_64482022_64484302_64484500_64485454_64485514_64485925_64486018_64488486_64488589_64490040_64490120_64495482_64495605_64495698_64495773_64496366_64496407_64496948_64497051_64497162_64497260_64497647_64497755_64497967_64498040_64501329
transcript_47408.known	chr12	+	3108	22	FSM	ENSG00000183735.11	ENST00000677499.1	3108	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	69.4312168808168	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTACTATTTCATGGAAA	64448429	True	NA	-33	True	NA	NA	NA	64452089	64502066	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_64452188_64455839_64455958_64460188_64460330_64464333_64464464_64466900_64467083_64474229_64474391_64480011_64480123_64481841_64482022_64484302_64484500_64485454_64485514_64485925_64486018_64488486_64488589_64490040_64490120_64495482_64495605_64495698_64495776_64495981_64496090_64496366_64496407_64496948_64497051_64497166_64497260_64497647_64497755_64497967_64498040_64501329
transcript_47409.known	chr12	-	5081	14	FSM	ENSG00000135677.11	ENST00000258145.8	5081	14	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_8	11.4586986672977	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGAATGTGTCCTTTGTT	-64755106	True	NA	-5	True	ATTAAA	-17	NA	64759406	64713448	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_64716820_64720021_64720183_64721594_64721706_64723005_64723114_64728955_64729058_64737003_64737108_64739380_64739500_64740605_64740689_64743140_64743309_64744808_64744908_64745658_64745725_64747711_64747919_64752697_64752758_64759084
transcript_4741.nic	chr1	-	2318	5	NIC	ENSG00000117616.18	novel	2013	5	NA	NA	-31	0	intron_retention	FALSE	canonical	3	65	junction_2	19.421315609402	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTAGTCTTTATTGTATA	-25243948	True	NA	-30	True	AATAAA	-14	NA	25247488	25242254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_25242706_25243549_25244499_25245149_25245302_25246443_25247030_25247308
transcript_47415.known	chr12	+	8312	13	FSM	ENSG00000111490.15	ENST00000542120.6	8312	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	4.13235875607248	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCTTAGTAATTGTTTTC	64780501	True	NA	NA	False	AATAAA	-7	NA	64780515	64881032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_64781287_64785880_64786046_64827834_64827897_64828443_64828510_64830376_64830503_64832118_64832305_64836489_64836659_64838682_64838852_64843379_64843486_64864667_64864781_64866763_64866904_64870601_64870809_64875000
transcript_47416.known	chr12	+	7764	12	FSM	ENSG00000111490.15	ENST00000539867.6	7764	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.35994883865024	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTAGTAATTGTTTTCT	NA	False	NA	NA	False	AATAAA	-8	NA	64824646	64881033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_64825034_64827834_64827897_64828443_64828510_64830376_64830503_64832118_64832305_64836489_64836659_64838682_64838852_64843379_64843486_64864667_64864781_64866763_64866904_64870601_64870809_64875000
transcript_47417.known	chr12	+	596	4	FSM	ENSG00000111490.15	ENST00000456757.6	596	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	10.8423039781937	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCATAATTTTCTCTCTC	64781126	False	NA	NA	False	NA	NA	NA	64781192	64818770	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_64781287_64785880_64786046_64787359_64787382_64818455
transcript_47418.known	chr12	-	1977	10	FSM	ENSG00000156076.10	ENST00000286574.9	1977	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	3.31476308670584	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGTGTGGAGGTGATCT	-65121185	False	NA	NA	False	AATAAA	-22	NA	65121305	65050625	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_65051471_65055117_65055214_65056030_65056127_65062480_65062577_65066640_65066737_65067694_65067791_65068763_65068905_65077745_65077855_65120416_65120557_65121043
transcript_47422.known	chr12	+	4780	13	FSM	ENSG00000174106.3	ENST00000308330.3	4780	13	0	0	0	0	multi-exon	TRUE	canonical	3	132	junction_1	12.7614327826724	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAAGTGCCCTGTGTCTG	65168082	True	NA	49	True	ATTAAA	-44	NA	65169582	65248355	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_65171119_65210925_65210964_65215976_65216044_65218551_65218620_65238501_65238582_65238668_65238815_65239928_65240031_65240135_65240239_65240908_65241088_65243387_65243470_65245668_65245775_65245860_65245940_65246161
transcript_47426.nic	chr12	+	2180	8	ISM	ENSG00000174106.3	ENST00000308330.3	4780	13	-39	8116	-39	-5470	5prime_fragment	FALSE	canonical	3	132	junction_1	12.5746749055231	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTTCAAAGCATTATGAG	65168043	True	NA	4	True	AATACA	-14	NA	65169543	65240239	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_65171119_65210925_65210964_65215976_65216044_65218551_65218620_65238501_65238582_65238668_65238815_65239928_65240031_65240135
transcript_47429.nic	chr12	+	1608	2	ISM	ENSG00000174106.3	ENST00000308330.3	4780	13	-39	37397	-39	13	5prime_fragment	FALSE	canonical	3	132	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAGTAAGTAAACGATCA	65168043	True	NA	NA	False	NA	NA	NA	65169543	65210958	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_65171119_65210925
transcript_4743.nic	chr1	-	3210	5	NIC	ENSG00000117616.18	novel	2013	5	NA	NA	-433	0	intron_retention	FALSE	canonical	3	33	junction_1	32.9421842020228	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTTTTGTATATTTAAT	NA	False	NA	-66	True	AATGAA	-30	NA	25247890	25242290	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_25242414_25242538_25242706_25243549_25245302_25246443_25247030_25247308
transcript_47430.known	chr12	+	4377	7	FSM	ENSG00000174099.12	ENST00000308259.10	4377	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.69967317119759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTCTTTGATTCCTGA	65278592	True	NA	NA	False	AATAAA	-18	NA	65278682	65466907	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_65278866_65308528_65308656_65326825_65326935_65328525_65328604_65368997_65369027_65453727_65453826_65463154
transcript_47431.known	chr12	+	4290	6	FSM	ENSG00000174099.12	ENST00000355192.8	4290	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.78885438199983	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTCTTTGATTCCTGA	NA	False	NA	NA	False	AATAAA	-18	NA	65278642	65466907	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_65278866_65326825_65326935_65328525_65328604_65368997_65369027_65453727_65453826_65463154
transcript_47432.known	chr12	+	1508	5	FSM	ENSG00000149948.14	ENST00000537275.5	1508	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	10.256095748383	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTATAAAATCCTCCATC	65824226	False	NA	NA	False	AATAAA	-12	NA	65824459	65842917	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_65825382_65828000_65828088_65838518_65838570_65842133_65842255_65842590
transcript_47433.known	chr12	+	4117	5	FSM	ENSG00000149948.14	ENST00000403681.7	4117	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	10.0249688278817	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGGAGGGAGACACTCAC	65824017	True	NA	12	True	AATAAA	-17	NA	65824482	65966291	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_65825382_65828000_65828088_65838518_65838570_65951382_65951416_65963244
transcript_47435.known	chr12	+	1584	2	FSM	ENSG00000149948.14	ENST00000545998.1	1584	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAGTTTCAAAAATCAG	65824702	False	NA	NA	False	AAAAAG	-39	NA	65824810	65829013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_65825382_65828000
transcript_4744.known	chr1	-	2941	4	FSM	ENSG00000117616.18	ENST00000498238.1	2941	4	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	6.37704215656966	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTATTGTATATATATA	-25243914	True	NA	-24	True	AATAAA	-20	NA	25247454	25242248	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_25242706_25243549_25245302_25246443_25247030_25247308
transcript_47440.known	chr12	-	876	7	FSM	ENSG00000155957.19	ENST00000633367.1	876	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_6	233.643365457319	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATACTGTTACAATCTT	-66164707	True	NA	-22	True	AATAAA	-15	NA	66170027	66137838	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_66138167_66138723_66138770_66145840_66145959_66147907_66147942_66152270_66152377_66153339_66153411_66169854
transcript_47441.known	chr12	-	2876	7	FSM	ENSG00000155957.19	ENST00000358230.8	2876	7	0	0	0	0	multi-exon	FALSE	canonical	3	554	junction_1	49.421374143403	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACAAAGCACATCTTGCA	-66164676	True	NA	NA	False	NA	NA	NA	66169996	66135845	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_66138167_66138723_66138770_66145840_66145959_66147907_66147942_66152270_66152377_66153339_66153449_66169854
transcript_47442.known	chr12	-	770	7	FSM	ENSG00000155957.19	ENST00000542724.5	770	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	239.275817137183	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAATGAGAAAAAAGGATT	-66164679	True	NA	-103	True	ATTAAA	-36	NA	66169999	66137919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_66138167_66138723_66138735_66145840_66145959_66147907_66147942_66152270_66152377_66153339_66153449_66169854
transcript_47445.known	chr12	-	7728	3	FSM	ENSG00000139233.7	ENST00000266604.7	7728	3	0	0	0	0	multi-exon	FALSE	canonical	3	619	junction_2	65	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGATCTGCATACCTT	-66121732	True	NA	-13	True	AATAAA	-17	NA	66130750	66116554	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_66124019_66128895_66129114_66130704
transcript_47449.known	chr12	+	3472	13	FSM	ENSG00000127311.10	ENST00000247815.9	3472	13	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_10	4	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGTTTTAAGGTATTTG	66300952	True	NA	NA	False	GATAAA	-16	NA	66302492	66338199	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_66302791_66304730_66305151_66306344_66306515_66309705_66310609_66313985_66314164_66315241_66315384_66318637_66318793_66321947_66322030_66322723_66322784_66323982_66324212_66324982_66325127_66331153_66331646_66338000
transcript_47454.known	chr12	+	11176	15	FSM	ENSG00000111530.13	ENST00000545606.6	11176	15	0	0	0	0	multi-exon	FALSE	canonical	3	637	junction_6	102.473316586538	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTGCCATCTTGAAGCA	67256614	True	NA	4	True	AATAAA	-16	NA	67269357	67319953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_67269786_67281909_67282054_67292621_67292777_67295032_67295157_67297406_67297664_67297747_67297854_67298949_67299096_67302322_67302616_67304604_67304747_67305103_67306598_67307396_67307493_67309900_67310071_67310151_67310317_67311692_67311801_67312605
transcript_47459.known	chr12	+	772	3	FSM	ENSG00000111530.13	ENST00000539434.1	772	3	0	0	0	0	multi-exon	FALSE	canonical	3	731	junction_2	9.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTGTGGAATAGTTCAG	67267998	False	NA	NA	False	NA	NA	NA	67269725	67293189	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_67269786_67281909_67282054_67292621
transcript_4746.known	chr1	-	1954	3	FSM	ENSG00000117616.18	ENST00000431849.3	1954	3	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATGCTGTAT	-25243906	False	NA	NA	False	GGGGCT	-2	NA	25247446	25244071	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_25245302_25246443_25247030_25247308
transcript_47460.known	chr12	+	663	2	FSM	ENSG00000111530.13	ENST00000541058.1	663	2	0	0	0	0	multi-exon	FALSE	canonical	3	750	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTAGGTGACTAATGTT	67256646	True	NA	NA	False	AGTAAA	-45	NA	67269389	67282176	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_67269786_67281909
transcript_47462.known	chr12	+	8888	3	FSM	ENSG00000127334.11	ENST00000344096.4	8888	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	12.5	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGCGAATTTGTCATCT	67644741	True	NA	2	True	AATAAA	-13	NA	67648744	67665406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_67649183_67649796_67649946_67657105
transcript_47467.known	chr12	+	2209	2	FSM	ENSG00000127334.11	ENST00000393555.3	2209	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTTTCAGAAACTTTTT	67644774	True	NA	16	True	TATAAA	-28	NA	67648777	67658909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_67649183_67657105
transcript_47472.known	chr12	-	2472	14	FSM	ENSG00000111554.15	ENST00000411698.6	2472	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	25.2647519739991	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAATTTGTTGTTCCT	-68330980	True	NA	NA	False	NA	NA	NA	68332286	68294862	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_68295367_68296922_68296983_68302619_68302873_68313442_68313553_68313643_68313754_68314947_68315266_68316077_68316254_68316580_68316611_68321346_68321447_68321524_68321629_68323072_68323241_68326656_68327022_68331106_68331222_68332227
transcript_47473.known	chr12	-	2918	14	FSM	ENSG00000111554.15	ENST00000303145.11	2918	14	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_10	9.65928440144139	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTGGCTTCTCCAGAAAG	-68331026	True	NA	-3	True	AATAAA	-14	NA	68332332	68294567	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_68295367_68296922_68296983_68302619_68302873_68313442_68313553_68313643_68313754_68314947_68315266_68316077_68316254_68321346_68321447_68321524_68321629_68323072_68323241_68325440_68325576_68326656_68327022_68331106_68331222_68332227
transcript_47478.known	chr12	-	2170	3	FSM	ENSG00000111554.15	ENST00000430606.3	2170	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	11.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATTTTATTCTAAAATGT	-68331075	True	NA	-13	True	ATTAAA	-12	NA	68332381	68325120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_68327022_68331106_68331222_68332227
transcript_47479.known	chr12	+	1072	9	FSM	ENSG00000127314.18	ENST00000537460.5	1072	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	292.861928858976	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTGCACATTCTAATCAC	68602551	True	NA	NA	False	NA	NA	NA	68610907	68659401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_68611044_68624670_68624874_68648698_68648782_68650399_68650469_68651994_68652052_68654111_68654253_68656305_68656450_68657100_68657218_68659279
transcript_47481.known	chr12	+	13378	8	FSM	ENSG00000127314.18	ENST00000250559.14	13378	8	0	0	0	0	multi-exon	FALSE	canonical	3	529	junction_1	64.7598389026245	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGATGACTGTATTATT	68602542	True	NA	NA	False	AATAAA	-23	NA	68610898	68671901	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_68611044_68648698_68648782_68650399_68650469_68651994_68652052_68654111_68654253_68656305_68656450_68657100_68657218_68659279
transcript_47482.known	chr12	-	475	1	FSM	ENSG00000234925.2	ENST00000414313.2	475	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAAATTGAGTCCAGGAG	-68642949	False	NA	NA	False	AAAAAG	-35	NA	68642993	68642518	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_68642500_68643000
transcript_47483.known	chr12	+	977	6	FSM	ENSG00000127314.18	ENST00000539091.5	977	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	308.844556371	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCCAAAGAGCTCCTAT	68602572	True	NA	NA	False	AATAAA	-3	NA	68610928	68659647	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_68611053_68648698_68648782_68654111_68654253_68656305_68656450_68657100_68657218_68659279
transcript_4749.known	chr1	-	565	3	FSM	ENSG00000117616.18	ENST00000562018.1	565	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGTTGCTGCAAATGACA	-25337127	False	NA	NA	False	NA	NA	NA	25337411	25304682	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_25304822_25306895_25306950_25337039
transcript_47498.known	chr12	+	6213	28	FSM	ENSG00000111581.10	ENST00000229179.9	6213	28	0	0	0	0	multi-exon	FALSE	canonical	3	715	junction_9	64.5184972572997	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCAATAAGTTCTTTCCC	68676200	True	NA	NA	False	AATAAA	-14	NA	68686977	68745809	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_68687074_68688961_68689054_68689532_68689620_68690630_68690747_68691967_68692113_68696818_68696923_68700725_68700854_68702735_68702785_68709237_68709310_68710004_68710094_68713729_68713809_68715626_68715741_68719340_68719432_68719577_68719655_68721117_68721178_68721840_68721987_68722103_68722153_68725726_68725797_68726498_68726618_68727350_68727390_68731109_68731261_68731606_68731720_68732636_68732740_68733451_68733613_68734707_68734834_68735230_68735345_68741812_68741981_68742354
transcript_4751.known	chr1	-	629	2	FSM	ENSG00000117616.18	ENST00000568399.1	629	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGGCCATCTGCCCGCC	-25336949	False	NA	NA	False	NA	NA	NA	25337233	25304386	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_25304822_25337039
transcript_47518.nic	chr12	+	2497	25	ISM	ENSG00000111581.10	ENST00000229179.9	6213	28	-27	10982	0	1302	5prime_fragment	FALSE	canonical	3	715	junction_9	59.1800307677063	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAAGTAAGTTAAATATG	68676173	True	NA	NA	False	AAGAAA	-6	NA	68686950	68734827	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_68687074_68688961_68689054_68689532_68689620_68690630_68690747_68691967_68692113_68696818_68696923_68700725_68700854_68702735_68702785_68709237_68709310_68710004_68710094_68713729_68713809_68715626_68715741_68719340_68719432_68719577_68719655_68721117_68721178_68721840_68721987_68722103_68722153_68725726_68725797_68726498_68726618_68727350_68727390_68731109_68731261_68731606_68731720_68732636_68732740_68733451_68733613_68734707
transcript_4752.known	chr1	+	2266	7	FSM	ENSG00000183726.11	ENST00000374358.5	2266	7	0	0	0	0	multi-exon	FALSE	canonical	3	982	junction_5	63.935948851609	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTAGTCTTTAATTTTT	25325911	True	NA	23	True	ATTAAA	-17	NA	25338333	25362361	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_25338457_25340473_25340580_25342960_25343074_25351625_25351694_25352881_25352975_25356792_25356854_25360659
transcript_47526.nic	chr12	+	1550	11	ISM	ENSG00000111581.10	ENST00000378905.6	2859	26	0	28418	0	-104	5prime_fragment	TRUE	canonical	3	715	junction_9	61.3820820761238	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAAATAAGTAACAATT	68676173	True	NA	7	True	AATGAA	-39	NA	68686950	68714274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_68687074_68688961_68689054_68689532_68689620_68690630_68690747_68691967_68692113_68696818_68696923_68700725_68700854_68702735_68702785_68709237_68709310_68710004_68710094_68713729
transcript_47527.nic	chr12	+	1654	11	ISM	ENSG00000111581.10	ENST00000378905.6	2859	26	0	28314	0	0	5prime_fragment	FALSE	canonical	3	715	junction_9	61.3820820761238	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTACTCTTAACAGCTTA	68676173	True	NA	NA	False	AAAAAG	-19	NA	68686950	68714378	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_68687074_68688961_68689054_68689532_68689620_68690630_68690747_68691967_68692113_68696818_68696923_68700725_68700854_68702735_68702785_68709237_68709310_68710004_68710094_68713729
transcript_47537.known	chr12	+	573	3	FSM	ENSG00000111581.10	ENST00000540453.5	573	3	0	0	0	0	multi-exon	FALSE	canonical	3	898	junction_2	5.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCCATGCCTATAATCTC	68676193	True	NA	NA	False	AATATA	-32	NA	68686970	68689910	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_68687074_68688961_68689054_68689532
transcript_47538.known	chr12	-	1733	3	FSM	ENSG00000247363.3	ENST00000500695.2	1733	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATTATTTCTGTCATAAAA	-68686706	True	NA	NA	False	AATAAA	-16	NA	68686859	68674370	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_68675822_68685858_68686018_68686736
transcript_47540.known	chr12	+	3728	5	FSM	ENSG00000175782.11	ENST00000319429.7	3728	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	54.2102388852881	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAACCTTGGGAAGATCCT	68742934	True	NA	NA	False	AATAAA	-18	NA	68746134	68762769	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_68746780_68747929_68748041_68752031_68752191_68759156_68759240_68760039
transcript_47541.known	chr12	+	17722	5	FSM	ENSG00000175782.11	ENST00000398004.4	17722	5	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	14.4913767461894	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGTTTCTTTCATTAAT	68742975	True	NA	NA	False	AATAAA	-17	NA	68746175	68781468	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_68746780_68747929_68748041_68752031_68752191_68759156_68759240_68764703
transcript_47547.known	chr12	-	6627	9	FSM	ENSG00000135678.12	ENST00000551568.6	6627	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.4142135623731	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGCTTTTTTCCCATTAT	-68933124	True	NA	NA	False	AATAAA	-20	NA	68933171	68851174	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_68856680_68858922_68859072_68866895_68867049_68869324_68869496_68870214_68870400_68871783_68871957_68885791_68885890_68932677_68932841_68933141
transcript_47555.known	chr12	+	7490	11	FSM	ENSG00000135679.27	ENST00000258149.11	7490	11	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_8	9.47048045243746	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAGAGAGGAGTGGTACT	68798453	True	NA	NA	False	AATGAA	-19	NA	68808176	68845544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_68808492_68809207_68809293_68813553_68813629_68816811_68816946_68820324_68820375_68824362_68824431_68824554_68824652_68828770_68828932_68835828_68835985_68836671_68836750_68839273
transcript_47558.known	chr12	+	2523	11	FSM	ENSG00000135679.27	ENST00000539479.6	2523	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	19.3600103305758	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTAGTATTTAAATTTT	68808895	False	NA	NA	False	NA	NA	NA	68809001	68840807	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_68809087_68809207_68809293_68813553_68813629_68816811_68816946_68820324_68820375_68824362_68824431_68824554_68824652_68828770_68828932_68835828_68835985_68836671_68836750_68839273
transcript_47562.nic	chr12	+	1281	2	ISM	ENSG00000135679.27	ENST00000393415.7	842	11	-84	28948	-69	-6684	5prime_fragment	FALSE	canonical	3	21	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTTAGAGAATTAGAACT	68808826	False	NA	NA	False	AAAAAG	-11	NA	68808932	68810334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_68809087_68809207
transcript_47565.known	chr12	+	2229	11	FSM	ENSG00000111605.18	ENST00000266679.8	2229	11	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_5	420.407944739392	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGTGTAAAGCTGTTCA	69222276	True	NA	17	True	AATAAA	-14	NA	69239615	69269939	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_69239707_69251128_69251339_69253050_69253155_69256696_69256843_69257731_69257906_69258034_69258146_69258589_69259095_69259427_69259544_69260043_69260198_69262372_69262563_69269511
transcript_4757.known	chr1	+	1102	6	FSM	ENSG00000183726.11	ENST00000480937.5	1102	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	438.863805752992	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCACCAGGCTCCCTGTGT	25325900	True	NA	NA	False	NA	NA	NA	25338322	25361279	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_25338457_25340473_25340580_25342960_25343074_25351625_25351694_25356792_25356854_25360659
transcript_47573.known	chr12	+	1915	10	FSM	ENSG00000111605.18	ENST00000456847.7	1915	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	366.55951296237	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGTGTAAAGCTGTTCA	69222260	True	NA	17	True	AATAAA	-14	NA	69239599	69269939	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_69239707_69251128_69251339_69253050_69253155_69256696_69256843_69257731_69257783_69258685_69259095_69259427_69259544_69260043_69260198_69262372_69262563_69269511
transcript_47578.known	chr12	+	6584	10	FSM	ENSG00000111605.18	ENST00000435070.7	6584	10	0	0	0	0	multi-exon	FALSE	canonical	3	990	junction_5	82.4034039809905	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCAGTTTGTCTTTTTT	69222229	True	NA	15	True	AATAAA	-18	NA	69239568	69274358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_69239707_69251128_69251339_69253050_69253155_69256696_69256843_69257731_69257906_69258589_69259095_69259427_69259544_69260043_69260198_69262372_69262563_69269511
transcript_47590.known	chr12	+	234	4	FSM	ENSG00000111605.18	ENST00000551516.1	234	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	564.053385968227	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCAGTTTGCTTCTTGTG	69222302	True	NA	-87	True	AAAACA	-29	NA	69239641	69269573	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_69239707_69251128_69251142_69262468_69262563_69269511
transcript_47593.nic	chr12	+	1578	8	NIC	ENSG00000127337.7	novel	1468	7	NA	NA	-30	-76	combination_of_known_junctions	FALSE	canonical	2	11	junction_2	133.558822934591	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTCCCTCCTGATGTG	69354373	True	NA	7	True	AATAAA	-17	NA	69359679	69390794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_69360024_69362787_69362908_69364176_69364300_69365632_69365700_69365789_69365885_69370705_69370799_69370887_69370976_69390146
transcript_47594.known	chr12	+	827	7	FSM	ENSG00000127337.7	ENST00000552955.1	827	7	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	136.713101867459	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTAAGTGCCATGCATT	69354472	True	NA	NA	False	NA	NA	NA	69359778	69370971	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_69360024_69362787_69362908_69364176_69364300_69365632_69365700_69365789_69365885_69370705_69370799_69370887
transcript_47595.known	chr12	+	1468	7	FSM	ENSG00000127337.7	ENST00000247843.7	1468	7	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_3	22.544400635191	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTATTGTGACATCACATC	69354436	True	NA	83	True	AATACA	-16	NA	69359742	69390870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_69360024_69362787_69362908_69365632_69365700_69365789_69365885_69370705_69370799_69370887_69370976_69390146
transcript_47598.known	chr12	+	1100	5	FSM	ENSG00000127337.7	ENST00000548020.5	1100	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	129.615537263092	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTATAAAGTATTACTTGT	69354403	True	NA	NA	False	NA	NA	NA	69359709	69390631	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_69360024_69362787_69362908_69370705_69370799_69370887_69370976_69390146
transcript_47599.known	chr12	+	428	2	FSM	ENSG00000127337.7	ENST00000552949.1	428	2	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTAATTTGTTTTGCTT	69354449	True	NA	NA	False	NA	NA	NA	69359755	69362947	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_69360024_69362787
transcript_4760.known	chr1	+	776	6	FSM	ENSG00000183726.11	ENST00000498135.5	776	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	434.043315810761	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAGAAATTACA	25325894	True	NA	-22	True	NA	NA	NA	25338316	25360967	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_25338457_25340473_25340580_25351625_25351694_25352881_25352975_25356792_25356854_25360659
transcript_47604.known	chr12	+	6768	9	FSM	ENSG00000166225.9	ENST00000549921.6	6768	9	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_8	19.8049078513383	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTATTGTATTTATATTT	69468149	True	NA	30	True	AATAAA	-38	NA	69470387	69579793	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_69470531_69530864_69530961_69532013_69532057_69562179_69562275_69569004_69569097_69570330_69570518_69571275_69571435_69572117_69572282_69574004
transcript_47610.known	chr12	+	1916	16	FSM	ENSG00000166226.13	ENST00000299300.11	1916	16	0	0	0	0	multi-exon	TRUE	canonical	3	2057	junction_8	191.891172861657	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTCTTATGTCTTATA	69555145	True	NA	30	True	AATAAA	-15	NA	69585458	69601570	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_69585525_69586269_69586345_69586752_69586819_69587504_69587617_69587929_69588007_69588149_69588263_69589484_69589688_69592058_69592160_69592975_69593104_69593509_69593614_69597155_69597276_69597637_69597767_69597967_69598072_69598321_69598422_69599862_69600005_69601294
transcript_47614.nic	chr12	+	975	9	ISM	ENSG00000166226.13	ENST00000544368.6	1728	15	-90	8477	-56	-558	5prime_fragment	TRUE	canonical	3	2057	junction_8	145.752304870283	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGGAGAAAGTTGAACGT	NA	False	NA	NA	False	AATAGA	-21	NA	69585369	69593048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_69585525_69586269_69586345_69586752_69586819_69587504_69587617_69587929_69588007_69588149_69588263_69589484_69589688_69592058_69592160_69592975
transcript_47615.nic	chr12	+	783	8	ISM	ENSG00000166226.13	ENST00000544368.6	1728	15	-31	9426	3	-214	5prime_fragment	FALSE	canonical	3	2407	junction_5	57.5322447300074	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGAATTGAAAATGCTAAAAT	69555115	True	NA	NA	False	AGTAAA	-11	NA	69585428	69592099	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_69585525_69586269_69586345_69586752_69586819_69587504_69587617_69587929_69588007_69588149_69588263_69589484_69589688_69592058
transcript_47618.known	chr12	+	776	7	FSM	ENSG00000166226.13	ENST00000551620.5	776	7	0	0	0	0	multi-exon	FALSE	canonical	3	2407	junction_5	62.1380631246975	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTTTGAGACCAGTGAC	69555145	True	NA	NA	False	NA	NA	NA	69585458	69589751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_69585525_69586269_69586345_69586752_69586819_69587504_69587617_69587929_69588007_69588149_69588263_69589484
transcript_4762.known	chr1	+	965	5	FSM	ENSG00000183726.11	ENST00000491936.5	965	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	479.654302597193	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCACCATGGTCCAGCCAC	25325897	True	NA	NA	False	NA	NA	NA	25338319	25361265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_25338457_25351625_25351694_25352881_25352975_25356792_25356854_25360659
transcript_47625.known	chr12	+	9333	11	FSM	ENSG00000127328.22	ENST00000247833.12	9333	11	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_3	26.431799030713	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGTGTATCTACATCCT	69734891	True	NA	14	True	AATAAA	-19	NA	69738859	69823199	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_69739032_69755383_69755660_69756404_69756664_69784719_69784816_69794436_69794515_69795140_69795345_69800208_69800338_69801608_69801722_69812777_69812878_69812963_69813034_69815363
transcript_47627.known	chr12	+	1755	10	FSM	ENSG00000127328.22	ENST00000483530.6	1755	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	60.0754669427967	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTGTACATTTTCTCT	69734893	True	NA	14	True	AATAAA	-15	NA	69738861	69815723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_69739032_69755383_69755660_69756404_69756664_69784719_69784816_69794436_69794515_69795140_69795345_69800208_69800338_69801608_69801722_69812963_69813034_69815363
transcript_47629.known	chr12	+	1613	9	FSM	ENSG00000127328.22	ENST00000417413.7	1613	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	64.9591217613046	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTGTACATTTTCTCT	69734893	True	NA	14	True	AATAAA	-15	NA	69738861	69815723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_69739032_69755383_69755660_69756404_69756664_69784719_69784816_69794436_69794515_69795140_69795345_69812777_69812878_69812963_69813034_69815363
transcript_47630.known	chr12	+	2840	9	FSM	ENSG00000127328.22	ENST00000551641.5	2840	9	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	49.1221373211712	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGATAAATAAAAAGT	69778566	True	NA	NA	False	AAAAAG	-15	NA	69778949	69817181	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_69779182_69784719_69784816_69794436_69794515_69795140_69795345_69800208_69800338_69801608_69801722_69812777_69812878_69812963_69813034_69815363
transcript_47635.known	chr12	-	883	2	FSM	ENSG00000257815.8	ENST00000549651.1	883	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTTGTTTCTTTTAAAAA	-70242645	True	NA	-15	True	AATAAA	-14	NA	70243360	70242305	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_70242894_70243065
transcript_47636.known	chr12	-	452	2	FSM	ENSG00000257815.8	ENST00000553135.2	683	2	28	203	2	0	multi-exon	FALSE	canonical	3	18	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGCCTTTATTTCCTTGTA	-70242643	True	NA	NA	False	ATTAAA	-20	NA	70243358	70242488	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_70242894_70243311
transcript_47639.nic	chr12	+	2455	16	NIC	ENSG00000111596.14	novel	2288	16	NA	NA	27	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	139.357477971821	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCCCTTTTCTTGGGGT	70234300	True	NA	NA	False	NA	NA	NA	70243475	70353938	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_70244190_70278131_70278275_70310894_70311018_70319297_70319365_70329422_70329571_70330286_70330470_70332766_70332847_70335437_70335564_70337388_70337514_70338442_70338564_70338665_70338823_70342106_70342169_70342257_70342308_70344127_70344229_70346179_70346325_70353828
transcript_4764.known	chr1	+	3940	11	FSM	ENSG00000204178.11	ENST00000374343.5	3940	11	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_5	6.78896162899747	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTTTTCTGCCTTTTTAA	25429755	True	NA	NA	False	AATAAA	-20	NA	25430896	25500209	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_25431179_25446761_25446904_25448807_25448935_25454258_25454383_25456652_25456832_25458390_25458893_25484115_25484275_25485612_25485796_25489172_25489294_25491409_25491585_25498263
transcript_47640.known	chr12	+	2288	16	FSM	ENSG00000111596.14	ENST00000551043.5	2288	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	141.304619724748	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	70243594	True	NA	NA	False	NA	NA	NA	70243750	70353913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_70244323_70278131_70278275_70310894_70311018_70319297_70319365_70329422_70329571_70330286_70330470_70332766_70332847_70335437_70335564_70337388_70337514_70338442_70338564_70338665_70338823_70342106_70342169_70342257_70342308_70344127_70344229_70346179_70346325_70353828
transcript_47642.known	chr12	+	4717	3	FSM	ENSG00000135643.5	ENST00000258111.5	4717	3	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_2	9	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGTGTGTGTGGCATT	70365809	True	NA	15	True	AATAAA	-15	NA	70366289	70434292	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_70367071_70400208_70400337_70430484
transcript_47652.known	chr12	-	565	3	FSM	ENSG00000258053.1	ENST00000549357.1	565	3	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	79.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAAGTGTCTGGGCGACT	-71116852	False	NA	-3	True	AATAAA	-20	NA	71118247	71047401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_71047680_71115849_71115959_71118069
transcript_47653.nnic	chr12	-	1049	3	NNC	ENSG00000258053.1	novel	565	3	NA	NA	-299	-62806	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	76.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCGTGTGACCTCATTCCT	-71117151	True	NA	2	True	AATAAA	-25	NA	71118546	71110207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_71110671_71115849_71115959_71118069
transcript_47654.nnic	chr12	-	788	3	NNC	ENSG00000258053.1	novel	565	3	NA	NA	-317	-62812	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	76.5	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAAGTCCGTGTGACCTC	-71117169	True	NA	-4	True	AATAAA	-19	NA	71118564	71110213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_71110454_71115905_71115959_71118069
transcript_47656.nnic	chr12	-	997	3	NNC	ENSG00000258053.1	novel	565	3	NA	NA	-472	-62814	at_least_one_novel_splicesite	FALSE	canonical	3	99	junction_1	33	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCAAGTCCGTGTGACC	NA	False	NA	-6	True	AATAAA	-17	NA	71118719	71110215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_71110454_71115849_71115959_71118069
transcript_47660.nnic	chr12	-	2529	3	NNC	ENSG00000258053.1	novel	565	3	NA	NA	-325	-63927	at_least_one_novel_splicesite	TRUE	canonical	3	16	junction_1	74.5	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAATTTCCCAGTCTTAA	-71117177	True	NA	NA	False	ATTAAA	-12	NA	71118572	71111328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_71113246_71115849_71115959_71118069
transcript_47662.known	chr12	-	7037	35	FSM	ENSG00000133858.17	ENST00000378743.9	7037	35	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_24	13.2282661079014	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGCTGTCTTTATTCAC	-71662877	True	NA	-2	True	AATATA	-18	NA	71663848	71609598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_71610566_71610694_71610758_71611057_71611098_71611785_71611888_71613334_71613436_71614534_71614701_71614833_71614939_71615205_71615317_71619314_71619410_71619925_71620125_71620209_71620316_71623359_71623598_71624103_71624293_71626259_71626447_71627750_71627935_71628917_71629038_71629608_71629711_71630599_71630722_71630822_71630955_71631777_71631888_71631971_71632515_71632885_71633018_71633263_71633439_71634154_71634305_71634703_71634826_71635442_71635581_71636489_71636655_71636849_71637060_71638417_71638516_71642435_71642560_71644094_71644319_71644876_71645076_71647748_71647814_71656884_71657302_71663012
transcript_47669.nic	chr12	+	1612	7	NIC	ENSG00000139291.14	novel	5662	6	NA	NA	-39	0	intron_retention	FALSE	canonical	0	0	junction_6	40.6478781734053	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTGTACTGTTTCTTA	NA	False	NA	NA	False	AATAAA	-19	NA	71686042	71704056	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_71686811_71689590_71689705_71696435_71696574_71697279_71697535_71698899_71699110_71700831_71700879_71703976
transcript_47672.known	chr12	+	5662	6	FSM	ENSG00000139291.14	ENST00000266673.10	5662	6	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_3	7.7614431647729	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGCTACCTGAATTTCT	71685217	True	NA	NA	False	AATACA	-14	NA	71686081	71705047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_71686811_71689590_71689705_71696435_71696574_71697279_71697535_71698899_71699110_71700831
transcript_47675.nic	chr12	-	1598	5	ISM	ENSG00000133858.17	ENST00000552994.5	7597	34	-51	34562	-12	654	5prime_fragment	FALSE	canonical	3	70	junction_4	4.02336923485777	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGCAGGAAAGACAGAAAGA	-71662899	True	NA	-25	True	AAGAAA	-16	NA	71663870	71644259	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_71644319_71644876_71645076_71647748_71647814_71656884_71657302_71663012
transcript_47676.nic	chr12	-	1504	4	ISM	ENSG00000133858.17	ENST00000552994.5	7597	34	-53	35216	-14	0	5prime_fragment	FALSE	canonical	3	70	junction_3	4.49691252107735	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAAACACATTCGGCCAA	-71662901	True	NA	NA	False	AAAAAG	-12	NA	71663872	71644913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_71645076_71647748_71647814_71656884_71657302_71663012
transcript_47677.known	chr12	+	4432	3	FSM	ENSG00000173451.7	ENST00000308086.3	4432	3	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	2	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTCATGCCTGTTATT	71663565	True	NA	8	True	ATTAAA	-19	NA	71664300	71680644	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_71664581_71674202_71674399_71676688
transcript_4768.nic	chr1	+	1022	6	ISM	ENSG00000204178.11	ENST00000647928.1	2887	11	-118	40727	-16	-280	5prime_fragment	FALSE	canonical	3	57	junction_5	5.19230199429887	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGGAAAGAAAAGGACAAGGA	25430831	False	NA	15	True	NA	NA	NA	25430841	25458503	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_25431179_25446761_25446904_25448807_25448935_25454258_25454383_25456652_25456832_25458390
transcript_47682.nic	chr12	-	1338	3	ISM	ENSG00000133858.17	ENST00000552994.5	7597	34	-84	38086	-45	-2870	5prime_fragment	FALSE	canonical	3	70	junction_2	5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAATTAGTACCTCAGAT	NA	False	NA	NA	False	GATAAA	-17	NA	71663903	71647783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_71647814_71656884_71657302_71663012
transcript_47683.known	chr12	+	672	2	FSM	ENSG00000173451.7	ENST00000547843.1	672	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGATGTTTCTGTTTTT	71664469	False	NA	NA	False	ATTAAA	-21	NA	71664480	71665440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_71664581_71664868
transcript_47686.known	chr12	-	1771	2	FSM	ENSG00000133858.17	ENST00000548100.1	1771	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGGATTTGGCTTGTTTT	-71662853	True	NA	NA	False	AATACA	-24	NA	71663824	71656342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_71657302_71663012
transcript_47690.known	chr12	+	15558	7	FSM	ENSG00000080371.6	ENST00000261263.5	15558	7	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_3	39.2923515316771	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTGAGTCTGGCTTCT	71745577	True	NA	NA	False	AATAAA	-16	NA	71754862	71800286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_71755289_71769799_71769860_71770591_71770700_71773958_71774023_71782030_71782086_71782569_71782659_71785530
transcript_47693.known	chr12	+	6184	18	FSM	ENSG00000121749.16	ENST00000550746.5	6184	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	41.8829312583999	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCTTCCATCAGTACCT	71837649	True	NA	NA	False	ATTAAA	-14	NA	71839717	71927248	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_71839812_71872069_71872169_71872928_71873004_71880468_71880608_71884810_71885022_71893221_71893325_71894324_71894376_71894685_71894884_71895946_71896076_71896676_71896781_71897846_71897942_71907021_71907139_71913825_71913927_71917697_71917798_71918450_71918549_71920730_71920848_71921367_71921455_71922982
transcript_47698.known	chr12	+	3157	17	FSM	ENSG00000121749.16	ENST00000485960.7	3157	17	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	19.1978799285234	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGTTTTTAGTTAAATT	71837690	True	NA	4	True	AATAAA	-13	NA	71839758	71924313	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_71839812_71872069_71872169_71872928_71873004_71880468_71880608_71884810_71885022_71893221_71893325_71894685_71894884_71895946_71896076_71896676_71896781_71897846_71897942_71907021_71907139_71913825_71913927_71917697_71917798_71918450_71918549_71920730_71920848_71921367_71921455_71922982
transcript_47708.known	chr12	-	2182	3	FSM	ENSG00000236333.4	ENST00000662127.1	2182	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATAAAGTTCATTTT	-72272535	False	NA	-31	True	ACTAAA	-8	NA	72272554	72253535	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_72254615_72255403_72255775_72271822
transcript_47709.known	chr12	-	3088	3	FSM	ENSG00000236333.4	ENST00000655489.1	3088	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTTAAGTGTGTGTCTG	-72272217	False	NA	NA	False	AATAAA	-3	NA	72272236	72259576	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_72262111_72264481_72264622_72271822
transcript_47710.known	chr12	-	1001	4	FSM	ENSG00000251138.7	ENST00000515416.7	1001	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	4.49691252107735	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTCTCGGGTGTGTCTTT	NA	False	NA	NA	False	ATTAAA	-22	NA	74292657	74199571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_74200074_74285024_74285094_74285859_74285947_74292314
transcript_47711.known	chr12	-	1209	2	FSM	ENSG00000180881.20	ENST00000548958.2	1209	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGTCTTGGGTATTTCT	-75390376	True	NA	NA	False	ATTAAA	-20	NA	75390910	75359883	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_75361020_75390837
transcript_47713.nnic	chr12	+	441	4	NNC	ENSG00000173401.10	novel	404	3	NA	NA	-5	-145	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	23.6220236220354	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTATCATCACTTTGCT	75366434	True	NA	NA	False	AATAAA	-22	NA	75366931	75370239	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_75367014_75369476_75369654_75369959_75369987_75370084
transcript_47714.known	chr12	-	10104	10	FSM	ENSG00000111615.14	ENST00000229214.9	10104	10	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_9	14.8099065943487	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCAGTTCTTCCACTTTGT	-75505886	True	NA	NA	False	AATAAA	-14	NA	75511609	75490862	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_75499952_75501722_75501817_75501922_75502001_75503903_75504075_75505197_75505255_75506315_75506400_75506483_75506610_75506781_75506917_75508273_75508447_75511512
transcript_4772.known	chr1	+	2914	9	FSM	ENSG00000157978.12	ENST00000374338.5	2914	9	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_8	18.0030379380815	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACGCTCATCAGGTGGAG	25540945	True	NA	10	True	AATAAA	-22	NA	25543605	25568886	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_25543787_25553921_25554065_25554859_25554973_25557152_25557268_25562643_25562717_25563069_25563154_25563660_25563792_25565172_25565208_25566847
transcript_47720.nic	chr12	-	864	7	ISM	ENSG00000111615.14	ENST00000229214.9	10104	10	-71	13091	-44	2210	5prime_fragment	FALSE	canonical	3	185	junction_6	14.147045235274	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTTAAGAAAGAATATACG	-75505957	True	NA	19	True	AATAAA	-23	NA	75511680	75503953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_75504075_75505197_75505255_75506315_75506400_75506483_75506610_75506781_75506917_75508273_75508447_75511512
transcript_47721.known	chr12	-	5913	2	FSM	ENSG00000139289.14	ENST00000619060.1	5913	2	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_1	0	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGGACCTTTTGAAGGC	-76031753	False	NA	-15	True	AATAAA	-22	NA	76031776	76025446	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_76030093_76030509
transcript_47728.known	chr12	-	1896	16	FSM	ENSG00000187109.15	ENST00000393263.7	1896	16	0	0	0	0	multi-exon	FALSE	canonical	3	989	junction_1	464.707774365305	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGGGCCTATTTGTAAT	-76046209	True	NA	51	True	NA	NA	NA	76084666	76047154	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_76047719_76048392_76048465_76049199_76049251_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76074202_76074240_76084566
transcript_4773.nnic	chr1	+	3487	9	NNC	ENSG00000157978.12	novel	2914	9	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	41.746070174329	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACGCTCATCAGGTGGAG	25540927	True	NA	10	True	AATAAA	-22	NA	25543587	25568886	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_25544342_25553921_25554065_25554859_25554973_25557152_25557268_25562643_25562717_25563069_25563154_25563660_25563792_25565172_25565208_25566847
transcript_47734.nic	chr12	-	1511	16	NIC	ENSG00000187109.15	novel	1896	16	NA	NA	106	0	combination_of_known_junctions	FALSE	canonical	3	125	junction_15	677.668145596025	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGTTCTTACAAGATAA	-76083971	False	38457	-18	True	AATAAA	-15	NA	76083988	76047595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_76047719_76048392_76048465_76049199_76049251_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76074202_76074240_76083832
transcript_47738.nic	chr12	-	1525	16	NIC	ENSG00000187109.15	novel	1896	16	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	501	junction_1	551.520661444338	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGTTCTTACAAGATAA	-76084747	False	NA	-18	True	AATAAA	-15	NA	76084764	76047595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_76047719_76048420_76048465_76049199_76049251_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76074202_76074240_76084566
transcript_47741.known	chr12	-	13159	15	FSM	ENSG00000187109.15	ENST00000618691.5	13159	15	0	0	0	0	multi-exon	FALSE	canonical	3	1680	junction_9	366.031698192428	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGTTACATGTCTTTAA	-76046228	True	NA	NA	False	ATTAAA	-19	NA	76084685	76036584	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_76048465_76049199_76049251_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76074202_76074240_76084566
transcript_47747.nic	chr12	-	2353	15	NIC	ENSG00000187109.15	novel	13159	15	NA	NA	106	167	intron_retention	FALSE	canonical	3	125	junction_14	642.089354993461	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGAAGAAAATCTTAAGTG	-76083971	False	38457	NA	False	NA	NA	NA	76083988	76047427	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_76048465_76049199_76049251_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76074202_76074240_76083832
transcript_47763.known	chr12	-	1686	14	FSM	ENSG00000187109.15	ENST00000535020.6	1686	14	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	671.479405280591	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTTCGTGCTTTTTATA	-76046155	True	NA	NA	False	AAAACA	-13	NA	76084612	76048994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_76049526_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76074202_76074240_76084566
transcript_47765.known	chr12	-	1967	13	FSM	ENSG00000187109.15	ENST00000547773.5	1967	13	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_11	690.088883164094	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTTTGCAGCTAAAATA	-76046272	True	NA	6	True	NA	NA	NA	76084729	76047631	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_76048465_76049199_76049251_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76074202_76074240_76084566
transcript_47769.known	chr12	-	1838	13	FSM	ENSG00000187109.15	ENST00000549596.5	1838	13	0	0	0	0	multi-exon	FALSE	canonical	3	1680	junction_7	391.066170871376	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTTTTTGAATATCAAG	-76046228	True	NA	NA	False	ATTAAA	-24	NA	76084685	76049145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76074202_76074240_76084566
transcript_47771.known	chr12	-	1597	12	FSM	ENSG00000187109.15	ENST00000544816.5	1597	12	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_11	739.542856340075	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATTGGCAAGAC	-76046274	True	NA	12	True	NA	NA	NA	76084731	76047966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_76048465_76049199_76049251_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76084566
transcript_47772.known	chr12	-	1339	12	FSM	ENSG00000187109.15	ENST00000548044.5	1339	12	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_11	739.088560881878	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAATAAATAAATTGCAAAAC	-76046209	True	NA	-32	True	AAAACA	-44	NA	76084666	76049588	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76084566
transcript_47778.known	chr12	-	1074	10	FSM	ENSG00000187109.15	ENST00000551992.5	1074	10	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_9	752.157555073617	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGAATGTCACTTTGAA	-76084077	False	NA	11	True	AATAGA	-45	NA	76084094	76053328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76074202_76074240_76083832
transcript_47779.nic	chr12	-	713	7	ISM	ENSG00000187109.15	ENST00000549596.5	1838	13	-108	6979	-58	0	5prime_fragment	FALSE	canonical	3	1680	junction_1	113.94845325848	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGATGAAGAAAAAGAA	-76084776	False	NA	-4	True	AAGAAA	-22	NA	76084793	76056124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76074202_76074240_76084566
transcript_47782.nic	chr12	-	634	6	ISM	ENSG00000187109.15	ENST00000547704.5	760	8	-90	4773	-39	0	5prime_fragment	FALSE	canonical	3	1734	junction_5	99.9979999799996	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGATGAAGAAGATGAGATT	-76084757	False	NA	-25	True	NA	NA	NA	76084774	76059820	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76074202_76074240_76084566
transcript_47783.known	chr12	-	3568	2	FSM	ENSG00000179941.9	ENST00000650064.2	3568	2	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTTTTCATTTTTTTT	-76346293	True	NA	NA	False	AATGAA	-17	NA	76348415	76344473	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_76347788_76348161
transcript_47786.known	chr12	-	7239	24	FSM	ENSG00000091039.17	ENST00000611266.4	7239	24	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_21	50.9443894148751	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGGTGATCAAGTGACTT	-76554977	True	NA	-3	True	AATAAA	-16	NA	76559809	76351799	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_76356022_76356625_76356729_76358705_76358812_76369213_76369302_76369636_76369823_76371447_76371585_76373343_76373434_76375272_76375371_76378451_76378551_76384253_76384351_76386167_76386267_76386578_76386661_76389644_76389830_76390419_76390658_76392580_76392753_76394644_76394730_76397693_76397898_76399872_76399975_76402688_76402767_76410563_76410635_76450850_76450989_76459858_76459896_76487509_76487619_76559396
transcript_47792.known	chr12	-	3157	23	FSM	ENSG00000091039.17	ENST00000393250.8	3157	23	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_21	39.1850873978886	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTCAAGTTGGTTTGG	-76554977	True	NA	53	True	NA	NA	NA	76559809	76355835	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_76356022_76356625_76356729_76358705_76358812_76369213_76369302_76369636_76369823_76371447_76371585_76373343_76373434_76375272_76375371_76378451_76378551_76384253_76384351_76386167_76386267_76386578_76386661_76389644_76389830_76390419_76390658_76392580_76392753_76394644_76394730_76397693_76397898_76399872_76399975_76402688_76402767_76410563_76410635_76450850_76450980_76487509_76487619_76559396
transcript_47795.nic	chr12	-	869	7	NIC	ENSG00000091039.17	novel	732	6	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	65.4609722574366	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTTAAGGTTAGTTTCC	-76554980	True	NA	NA	False	AAAAAG	-2	NA	76559812	76402698	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_76402767_76410563_76410635_76450850_76450989_76459858_76459896_76487509_76487619_76537956_76537987_76559396
transcript_47797.nic	chr12	-	823	6	NIC	ENSG00000091039.17	novel	732	6	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	70.0611161772349	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTTAAGGTTAGTTTCC	-76554980	True	NA	NA	False	AAAAAG	-2	NA	76559812	76402698	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_76402767_76410563_76410635_76450850_76450980_76487509_76487619_76537956_76537987_76559396
transcript_47798.nic	chr12	-	800	6	ISM	ENSG00000091039.17	ENST00000547540.5	2583	20	-25	32986	-2	0	5prime_fragment	FALSE	canonical	3	37	junction_3	65.0119988925121	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTTAAGGTTAGTTTCC	-76554941	True	NA	NA	False	AAAAAG	-2	NA	76559773	76402698	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_76402767_76410563_76410635_76450850_76450989_76459858_76459896_76487509_76487619_76559396
transcript_47799.known	chr12	-	732	6	FSM	ENSG00000091039.17	ENST00000549570.5	732	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	70.1809090850211	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTTAAGGTTAGTTTCC	-76554880	True	NA	NA	False	AAAAAG	-2	NA	76559712	76402698	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_76402767_76410563_76410635_76450850_76450989_76487509_76487619_76537956_76537987_76559396
transcript_47800.nic	chr12	-	827	5	ISM	ENSG00000091039.17	ENST00000393250.8	3157	23	-37	46863	-37	0	5prime_fragment	FALSE	canonical	3	62	junction_3	54.1865988967752	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTTAAGGTTAGTTTCC	NA	False	NA	NA	False	AAAAAG	-2	NA	76559846	76402698	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_76402767_76410563_76410635_76450850_76450980_76487509_76487619_76559396
transcript_47801.nic	chr12	-	836	5	ISM	ENSG00000091039.17	ENST00000553139.5	902	6	-38	2818	-37	0	5prime_fragment	FALSE	canonical	3	59	junction_3	55.3624421426656	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTTAAGGTTAGTTTCC	NA	False	NA	NA	False	AAAAAG	-2	NA	76559846	76402698	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_76402767_76410563_76410635_76450850_76450989_76487509_76487619_76559396
transcript_47803.known	chr12	+	4732	17	FSM	ENSG00000186908.15	ENST00000426126.7	4732	17	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_9	11.4318633651737	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGCTTATGATTTCAC	76762973	True	NA	29	True	AATAAA	-14	NA	76764114	76853696	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_76764330_76797433_76797538_76805316_76805440_76809042_76809121_76809712_76809858_76815145_76815211_76815856_76816020_76822405_76822532_76826907_76827051_76828389_76828491_76841981_76842107_76842918_76842982_76845708_76845803_76846595_76846680_76848232_76848391_76849375_76849471_76850846
transcript_4781.known	chr1	+	3561	12	FSM	ENSG00000117643.15	ENST00000374332.9	3561	12	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_5	11.3217409518951	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATTGGGCTCATTGCAC	25616162	True	NA	NA	False	AATAAA	-21	NA	25616790	25784450	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_25618338_25686439_25686537_25746667_25746784_25749254_25749336_25753483_25753579_25758591_25758710_25763873_25763968_25771656_25771773_25778104_25778325_25780939_25781113_25782584_25782701_25783662
transcript_47824.known	chr12	-	910	7	FSM	ENSG00000175183.10	ENST00000552330.5	910	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	736.274273321807	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATAGGCTGGCTAACTC	-76853654	True	NA	NA	False	NA	NA	NA	76878991	76858828	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_76859029_76859546_76859641_76860283_76860414_76862809_76862960_76863175_76863345_76866148_76866262_76878937
transcript_47831.known	chr12	-	908	6	FSM	ENSG00000175183.10	ENST00000311083.10	908	6	0	0	0	0	multi-exon	TRUE	canonical	3	1484	junction_5	67.5988165576884	980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCATTGTCTTTTAATTA	-76853682	True	NA	-15	True	AATAAA	-19	NA	76879019	76858708	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_76859029_76859546_76859641_76860283_76860414_76863175_76863345_76866148_76866262_76878937
transcript_47832.known	chr12	-	754	6	FSM	ENSG00000175183.10	ENST00000546966.5	754	6	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_5	607.896043744323	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCGCCCTGTACTTGGATA	-76853686	True	NA	NA	False	ACTAAA	-35	NA	76879023	76858841	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_76859029_76859546_76859641_76860283_76860414_76863175_76863345_76866148_76866262_76878962
transcript_47833.known	chr12	-	632	5	FSM	ENSG00000175183.10	ENST00000547435.1	632	5	0	0	0	0	multi-exon	FALSE	canonical	3	1484	junction_4	75.4101286300454	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAAAGTA	-76853648	True	NA	NA	False	AATGAA	-16	NA	76878985	76859468	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_76859641_76860283_76860414_76863175_76863345_76866148_76866262_76878937
transcript_47840.known	chr12	-	5725	13	FSM	ENSG00000165891.16	ENST00000322886.12	5725	13	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_8	17.2197802928299	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGATGGTGGTTGTATT	-77061186	True	NA	-4	True	AATAAA	-16	NA	77065569	77021250	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_77024186_77025557_77025983_77027882_77028139_77029830_77030333_77033049_77033123_77033856_77034043_77043064_77043200_77044636_77044796_77046037_77046329_77050575_77050745_77055854_77056131_77064542_77064636_77065344
transcript_47842.known	chr12	-	5297	12	FSM	ENSG00000165891.16	ENST00000416496.6	5297	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	30.0729141469405	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGGTGGTTGTATTTTT	-77061180	True	NA	-1	True	AATAAA	-19	NA	77065563	77021247	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_77024186_77027882_77028139_77029830_77030333_77033049_77033123_77033856_77034043_77043064_77043200_77044636_77044796_77046037_77046329_77050575_77050745_77055854_77056131_77064542_77064636_77065344
transcript_47844.known	chr12	-	570	3	FSM	ENSG00000165891.16	ENST00000547316.1	570	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	53	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATTTACAGATTCTCTA	-77061167	True	NA	NA	False	AAAAAG	-32	NA	77065550	77055877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_77056131_77064542_77064654_77065344
transcript_47850.known	chr12	+	4705	11	FSM	ENSG00000067715.14	ENST00000261205.9	4705	11	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_2	12.8471786786049	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTGCGTTCCCACTCT	78855903	True	NA	13	True	AATAAA	-21	NA	78864773	79452008	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_78865110_78977798_78977932_79047296_79047363_79217502_79217686_79285786_79285972_79292007_79292131_79296068_79296237_79299383_79299552_79353501_79353620_79444072_79444207_79448917
transcript_47858.nic	chr12	+	1046	6	ISM	ENSG00000067715.14	ENST00000393240.7	3095	12	689	158221	-92	-4066	internal_fragment	FALSE	canonical	3	104	junction_2	11.9264412127005	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAACCCAAAGAAGAGGA	78864615	False	NA	17	True	AAGAAA	-3	NA	78864681	79292058	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_78865110_78977798_78977932_79047296_79047363_79217502_79217686_79285786_79285972_79292007
transcript_47867.nic	chr12	+	561	2	ISM	ENSG00000067715.14	ENST00000393240.7	3095	12	689	472348	-92	-239586	internal_fragment	FALSE	canonical	3	126	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTATTTGGAAAAAACAAATT	78864615	False	NA	11	True	NA	NA	NA	78864681	78977931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_78865110_78977798
transcript_47871.known	chr12	+	816	3	FSM	ENSG00000257474.5	ENST00000548359.1	816	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	4	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCTTTTTAGACCATATA	79539730	True	NA	NA	False	NA	NA	NA	79540202	79546554	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_79540447_79542308_79542392_79546065
transcript_47876.known	chr12	+	567	3	FSM	ENSG00000257474.5	ENST00000552167.1	567	3	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTATTCTGAATGTATA	79545435	True	NA	29	True	AATAGA	-34	NA	79545529	79550535	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_79545559_79546065_79546177_79550108
transcript_47882.known	chr12	-	8991	7	FSM	ENSG00000177425.11	ENST00000328827.9	8991	7	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_6	267.416497870519	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATTTGTTTTGTATGTG	-79685214	True	NA	-5	True	AATAAA	-19	NA	79690964	79584878	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_79592694_79594328_79594434_79596510_79596659_79613574_79613610_79621075_79621208_79689728_79690392_79690871
transcript_47888.nic	chr12	-	4189	6	ISM	ENSG00000177425.11	ENST00000328827.9	8991	7	370	4912	-13	1	3prime_fragment	FALSE	canonical	3	840	junction_2	54.5563928426358	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTATTTATGAGCTCAT	-79668096	True	NA	-29	True	AATAAA	-16	NA	79690594	79589790	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_79592694_79594328_79594434_79596510_79596659_79613574_79613610_79621075_79621208_79689728
transcript_47889.nic	chr12	-	3783	6	ISM	ENSG00000177425.11	ENST00000328827.9	8991	7	370	5318	-13	-405	3prime_fragment	FALSE	canonical	3	840	junction_2	54.5563928426358	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTAATACTTTTAAAGAC	-79668096	True	NA	NA	False	NA	NA	NA	79690594	79590196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_79592694_79594328_79594434_79596510_79596659_79613574_79613610_79621075_79621208_79689728
transcript_4789.known	chr1	+	1217	7	FSM	ENSG00000117640.18	ENST00000524618.5	1217	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	107.8867719211	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAGGCTTGTGATTTGAC	25815636	True	NA	-70	True	NA	NA	NA	25819985	25832211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_25820030_25823018_25823129_25823620_25823749_25826301_25826412_25826614_25826827_25829508_25829831_25831920
transcript_47890.nic	chr12	-	2566	6	ISM	ENSG00000177425.11	ENST00000328827.9	8991	7	370	6535	-13	1101	3prime_fragment	FALSE	canonical	3	840	junction_2	54.5563928426358	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAGTATGGTATCCTTTT	-79668096	True	NA	0	True	ATTAAA	-36	NA	79690594	79591413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_79592694_79594328_79594434_79596510_79596659_79613574_79613610_79621075_79621208_79689728
transcript_47891.nic	chr12	-	2025	6	ISM	ENSG00000177425.11	ENST00000328827.9	8991	7	370	7076	-13	560	3prime_fragment	FALSE	canonical	3	840	junction_2	54.5563928426358	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATCACTTTAACTCCTG	-79668096	True	NA	6	True	AATAAA	-33	NA	79690594	79591954	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_79592694_79594328_79594434_79596510_79596659_79613574_79613610_79621075_79621208_79689728
transcript_47899.nic	chr12	-	1442	5	ISM	ENSG00000177425.11	ENST00000328827.9	8991	7	-388	11649	-388	-4013	5prime_fragment	FALSE	canonical	3	227	junction_4	322.732377520447	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAGATCTTGAAAAGGTA	-79691342	False	NA	-18	True	AAGAAA	-2	NA	79691352	79596527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_79596659_79613574_79613610_79621075_79621208_79689728_79690392_79690871
transcript_4790.known	chr1	+	1953	7	FSM	ENSG00000117640.18	ENST00000374303.7	1953	7	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_1	33.0840680019183	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTTGCTGTGTCCATCT	25815604	True	NA	11	True	ATTAAA	-21	NA	25819953	25832938	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_25820030_25823018_25823129_25823643_25823749_25826301_25826412_25826614_25826827_25829508_25829831_25831920
transcript_47902.nic	chr12	-	1164	4	ISM	ENSG00000177425.11	ENST00000328827.9	8991	7	370	11649	-13	-4013	internal_fragment	FALSE	canonical	3	945	junction_2	19.1543438647449	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAGATCTTGAAAAGGTA	-79668096	True	NA	-18	True	AAGAAA	-2	NA	79690594	79596527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_79596659_79613574_79613610_79621075_79621208_79689728
transcript_47903.known	chr12	-	1573	4	FSM	ENSG00000177425.11	ENST00000551712.1	1573	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	430.616096102111	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCATAATGATGCCGTTTA	-79690070	False	22498	NA	False	NA	NA	NA	79690080	79603667	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_79604722_79613574_79613610_79621075_79621208_79689728
transcript_47909.known	chr12	-	732	2	FSM	ENSG00000177425.11	ENST00000547571.1	732	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCGAGATCGTGCCTTT	-79690020	False	NA	NA	False	NA	NA	NA	79690030	79667978	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_79668409_79689728
transcript_4791.known	chr1	+	1868	7	FSM	ENSG00000117640.18	ENST00000374307.9	1868	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	103.113206396336	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTTGCTGTGTCCATCT	25815653	True	NA	11	True	ATTAAA	-21	NA	25820002	25832938	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_25820030_25823018_25823129_25823643_25823749_25826301_25826412_25826614_25826827_25829544_25829831_25831920
transcript_47913.nic	chr12	-	2407	16	NIC	ENSG00000058272.19	novel	5620	25	NA	NA	-26	0	combination_of_known_junctions	TRUE	canonical	3	45	junction_4	114.114094951792	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAGAAAAGAAGGAGTCA	-79935142	False	NA	NA	False	GATAAA	-8	NA	79935156	79797268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_79797396_79798493_79798585_79805591_79805769_79806165_79806298_79807225_79807331_79808482_79808578_79809794_79810011_79817393_79817519_79820773_79820932_79821077_79821167_79822115_79822191_79828319_79828465_79832331_79832492_79845301_79845421_79872807_79872939_79934694
transcript_47914.nic	chr12	-	2520	16	ISM	ENSG00000058272.19	ENST00000437004.6	4639	25	227	22863	-103	0	internal_fragment	FALSE	canonical	3	243	junction_4	74.7161740633624	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAGAAAAGAAGGAGTCA	-79935219	False	NA	NA	False	GATAAA	-8	NA	79935233	79797268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_79797396_79798493_79798585_79805591_79805769_79806165_79806334_79807225_79807331_79808482_79808578_79809794_79810011_79817393_79817519_79820773_79820932_79821077_79821167_79822115_79822191_79828319_79828465_79832331_79832492_79845301_79845421_79872807_79872939_79934694
transcript_4792.known	chr1	+	1873	7	FSM	ENSG00000117640.18	ENST00000474295.5	1873	7	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_5	94.2645508956339	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGTCCATCTCTTG	25815579	True	NA	15	True	ATTAAA	-25	NA	25819928	25832942	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_25820030_25823018_25823129_25823643_25823749_25826301_25826412_25826614_25826827_25829617_25829831_25831920
transcript_47920.nic	chr12	-	2352	15	ISM	ENSG00000058272.19	ENST00000550107.5	2925	24	-302	21340	-103	0	5prime_fragment	FALSE	canonical	3	169	junction_3	83.3314013381486	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAGAAAAGAAGGAGTCA	-79935219	False	NA	NA	False	GATAAA	-8	NA	79935233	79797268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_79797396_79798493_79798585_79805591_79805769_79807225_79807331_79808482_79808578_79809794_79810011_79817393_79817519_79820773_79820932_79821077_79821167_79822115_79822191_79828319_79828465_79832331_79832492_79845301_79845421_79872807_79872939_79934694
transcript_47928.nic	chr12	-	1791	11	ISM	ENSG00000058272.19	ENST00000547330.5	2275	15	-45	11252	-45	-1670	5prime_fragment	FALSE	canonical	3	388	junction_4	37.3823487758594	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGAGTTTATTTTGATT	-79935161	False	NA	NA	False	AAGAAA	-2	NA	79935175	79808485	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_79808578_79809794_79810011_79817393_79817519_79820773_79820932_79821077_79821167_79822115_79822191_79828319_79828465_79832331_79832492_79845301_79845421_79872807_79872939_79934694
transcript_47932.nic	chr12	-	1259	8	ISM	ENSG00000058272.19	ENST00000547330.5	2275	15	-38	23632	-38	246	5prime_fragment	FALSE	canonical	3	388	junction_1	39.3643369105611	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTTGATGAAGAAGAAGAAG	-79935154	False	NA	-50	True	AAGAAA	-2	NA	79935168	79820865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_79820932_79821077_79821167_79822115_79822191_79828319_79828465_79832331_79832492_79845301_79845421_79872807_79872939_79934694
transcript_47933.nic	chr12	-	3076	5	ISM	ENSG00000058272.19	ENST00000550510.5	631	6	-518	5226	-103	1790	5prime_fragment	FALSE	canonical	3	439	junction_1	27.3895509273153	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGAAACAATTGTGCCTCA	-79935219	False	NA	NA	False	NA	NA	NA	79935233	79826337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_79828465_79832331_79832492_79845301_79845421_79872807_79872939_79934694
transcript_47934.known	chr12	-	6121	6	FSM	ENSG00000111052.8	ENST00000552864.6	6121	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	8.08949936646267	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAAGTATTGTTTTCATT	-80937800	True	NA	3	True	AGTAAA	-17	NA	80937934	80792519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_80797727_80811464_80811684_80845729_80845940_80848250_80848323_80889250_80889370_80937640
transcript_47938.known	chr12	+	8391	16	FSM	ENSG00000111058.8	ENST00000548058.6	8391	16	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_7	10.4656050417015	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACTATTTATTTATTGAT	81076544	True	NA	NA	False	AATAAA	-21	NA	81078078	81261210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_81078432_81109559_81109705_81134815_81135005_81139130_81139266_81143106_81143248_81151843_81151925_81152000_81152097_81174787_81174940_81199340_81199445_81216900_81216997_81220012_81220077_81231056_81231139_81233348_81233472_81253306_81253407_81253494_81253671_81254856
transcript_47947.known	chr12	-	1585	4	FSM	ENSG00000133773.12	ENST00000256151.8	1585	4	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_1	53.0471488394994	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGTCTGAAATTGCATTA	-82348783	True	NA	NA	False	AATAAA	-21	NA	82358387	82352302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_82353313_82354494_82354595_82356959_82357270_82358222
transcript_47948.known	chr12	-	984	4	FSM	ENSG00000133773.12	ENST00000548126.1	984	4	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_3	122.335603975294	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGGAATCAGAGCTATCA	-82357903	True	NA	NA	False	AATAAA	-11	NA	82358786	82352846	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_82353313_82354494_82354595_82356959_82357270_82358678
transcript_47951.nic	chr12	-	657	3	ISM	ENSG00000133773.12	ENST00000256151.8	1585	4	-81	2191	-59	-1647	5prime_fragment	FALSE	canonical	3	435	junction_2	1.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTTCTACTTTGAAAATA	-82357585	False	NA	NA	False	AAGAAA	-5	NA	82358468	82354493	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_82354595_82356959_82357270_82358222
transcript_47953.nic	chr12	-	591	3	ISM	ENSG00000133773.12	ENST00000256151.8	1585	4	-81	2257	-59	-1713	5prime_fragment	FALSE	canonical	3	435	junction_2	1.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CATCAAATCAAAAAGCACAA	-82357585	False	NA	NA	False	AATAAA	-8	NA	82358468	82354559	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_82354595_82356959_82357270_82358222
transcript_47955.known	chr12	-	600	2	FSM	ENSG00000133773.12	ENST00000552606.1	600	2	0	0	0	0	multi-exon	FALSE	canonical	3	435	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGAAGTCACGGTTTAAT	-82348805	True	NA	74	True	NA	NA	NA	82358409	82356856	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_82357270_82358222
transcript_47956.known	chr12	-	553	2	FSM	ENSG00000133773.12	ENST00000547758.1	553	2	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTAATTAGGGAAACATTT	-82357922	False	NA	87	True	NA	NA	NA	82358805	82356843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_82357270_82358678
transcript_47958.known	chr12	+	2064	12	FSM	ENSG00000127720.8	ENST00000248306.8	2064	12	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	5.28837802627236	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGACCTACATTCCTGA	82357851	True	NA	79	True	AATAAA	-28	NA	82358528	82479239	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_82358825_82386802_82386968_82389815_82389923_82398794_82399395_82402982_82403131_82430892_82430988_82434694_82434725_82438717_82438792_82456726_82456821_82476643_82476719_82477280_82477353_82478931
transcript_4796.known	chr1	+	2099	7	FSM	ENSG00000117640.18	ENST00000374301.7	2099	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	107.287257190943	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTTGCTGTGTCCATCT	25820112	True	NA	11	True	ATTAAA	-21	NA	25820192	25832938	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_25820415_25823018_25823129_25823643_25823749_25826301_25826412_25826614_25826827_25829508_25829831_25831920
transcript_47962.known	chr12	+	743	4	FSM	ENSG00000127720.8	ENST00000548200.5	743	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	3.39934634239519	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAATGGCAAAAGAAAG	82357862	True	NA	NA	False	NA	NA	NA	82358539	82398980	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_82358825_82386802_82386968_82389815_82389923_82398794
transcript_47966.known	chr12	+	5669	12	FSM	ENSG00000179104.9	ENST00000321196.8	5669	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.10469761868913	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTGTGTAAGCCGTTTT	82686580	True	NA	NA	False	AATAAA	-15	NA	82686905	83134866	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_82687670_82857009_82857581_82895817_82896647_82930430_82930546_82965023_82965110_82965559_82965745_82966918_82966998_82985924_82986047_83030797_83030880_83050903_83051019_83061767_83061832_83132209
transcript_47969.known	chr12	+	2682	6	FSM	ENSG00000179104.9	ENST00000548305.5	2682	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.22710574513201	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGAGTTTCTCAGAGCA	82686675	False	NA	NA	False	AATAAA	-19	NA	82687000	82965971	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_82687670_82857009_82857581_82895817_82896647_82930430_82930546_82965023_82965110_82965559
transcript_47973.nnic	chr12	-	756	2	Antisense	novelGene_ENSG00000257296.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAATGCTCATGTTTTCA	-84689300	True	NA	NA	False	AATAAA	-26	NA	84689783	84666034	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr12_-_84666620_84689612
transcript_47975.known	chr12	-	4927	13	FSM	ENSG00000072041.18	ENST00000681220.1	4927	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	76.4952340563341	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCTAAGGTGTACAATAT	-84910093	True	NA	NA	False	AATAAA	-5	NA	84912805	84859504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_84862007_84863438_84863602_84864849_84864986_84867033_84867194_84870477_84870671_84872601_84872795_84873086_84873329_84876496_84876608_84883858_84884041_84885434_84885562_84885910_84886069_84891831_84892309_84912522
transcript_47976.known	chr12	-	4799	12	FSM	ENSG00000072041.18	ENST00000266682.10	4799	12	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	70.380077947533	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATATGCTGTTTTGATATA	-84910087	True	NA	NA	False	AATAAA	-19	NA	84912799	84859490	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_84862007_84863438_84863602_84867033_84867194_84870477_84870671_84872601_84872795_84873086_84873329_84876496_84876608_84883858_84884041_84885434_84885562_84885910_84886069_84891831_84892309_84912522
transcript_4798.known	chr1	+	2053	7	FSM	ENSG00000117640.18	ENST00000374300.7	2053	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	108.745881148054	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTTGCTGTGTCCATCT	25820747	False	NA	11	True	ATTAAA	-21	NA	25820827	25832938	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_25821004_25823018_25823129_25823643_25823749_25826301_25826412_25826614_25826827_25829508_25829831_25831920
transcript_47983.known	chr12	-	4312	5	FSM	ENSG00000072041.18	ENST00000450363.4	4312	5	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_3	24.8130510014387	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTTGTTTTCGATTTT	-84912864	False	NA	-1	True	AATAAA	-22	NA	84912876	84880844	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_84884041_84885434_84885562_84885910_84886069_84891831_84892309_84912522
transcript_47991.known	chr12	-	4098	4	FSM	ENSG00000072041.18	ENST00000681281.1	4098	4	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_2	27.2559881290128	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCGAATTGTTCAATTG	-84910058	True	NA	-15	True	ACTAAA	-2	NA	84912770	84882346	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_84885562_84885910_84886069_84891831_84892309_84912522
transcript_47993.known	chr12	-	1831	2	FSM	ENSG00000072041.18	ENST00000681628.1	1831	2	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTGTAATCTACAAACCCT	-84910127	True	NA	NA	False	NA	NA	NA	84912839	84890794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_84892309_84912522
transcript_47997.known	chr12	-	5515	2	FSM	ENSG00000198774.5	ENST00000361228.5	5515	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGATATTGTTTTGGGT	-85836364	True	NA	NA	False	AATAAA	-19	NA	85836409	85800702	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_85805963_85836154
transcript_47998.known	chr12	+	1239	4	FSM	ENSG00000133636.11	ENST00000256010.7	1239	4	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_1	9.41629792788369	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTCTCTACAGATTTA	85867913	True	NA	10	True	AATAAA	-24	NA	85874294	85882992	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_85874477_85876639_85876702_85878344_85878570_85882222
transcript_47999.known	chr12	-	25116	4	ISM	ENSG00000182050.14	ENST00000611864.5	25268	5	206668	-1	206544	0	3prime_fragment	FALSE	canonical	3	13	junction_3	3.85861230093008	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGCTTTCATCTTCTGAA	NA	False	NA	NA	False	TATAAA	-2	NA	86049723	85955665	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_85980431_85983522_85983671_85989399_85989553_86049673
transcript_48.known	ERCC-00131	+	755	1	FSM	ERCC-00131A	DQ855003	755	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00131_+_0_800
transcript_48001.known	chr12	+	2829	7	FSM	ENSG00000133641.18	ENST00000356891.4	2829	7	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_1	23.3339285638364	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGAGTCTGAATTTTTTG	88032070	True	NA	10	True	AATAAA	-18	NA	88035535	88050160	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_88035739_88040147_88040266_88042824_88042921_88043598_88043716_88045581_88045780_88046806_88046977_88048233
transcript_48004.known	chr12	+	2740	6	FSM	ENSG00000133641.18	ENST00000550333.5	2740	6	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	83.0339689524715	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGAGTCTGAATTTTT	88032039	True	NA	8	True	AATAAA	-16	NA	88035504	88050158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_88035739_88042824_88042921_88043598_88043716_88045581_88045780_88046806_88046977_88048233
transcript_48007.known	chr12	-	1458	6	FSM	ENSG00000198707.17	ENST00000552770.3	1458	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	2.82842712474619	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGGTAACTGTCCTGT	-88141001	True	NA	NA	False	AGTAAA	-21	NA	88142099	88135852	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_88136787_88139144_88139192_88139494_88139565_88140955_88141034_88141205_88141335_88141899
transcript_48008.known	chr12	+	1578	5	FSM	ENSG00000133641.18	ENST00000552121.5	1578	5	0	0	0	0	multi-exon	FALSE	canonical	1	21	junction_3	119.827740945075	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTCTTCAGAAGCAGCAA	88032070	True	NA	NA	False	AGTAAA	-35	NA	88035535	88049225	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_88035739_88042824_88042921_88043598_88043716_88046806_88046977_88048233
transcript_48014.known	chr12	+	7192	14	FSM	ENSG00000139324.12	ENST00000266712.11	7192	14	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_2	8.32547953378396	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAGTTTGCCCTTTCTTA	88138560	True	NA	8	True	AATAAA	-19	NA	88142306	88199887	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_88142488_88148287_88148505_88153290_88153510_88154287_88154388_88160113_88160230_88160678_88160852_88166329_88166583_88172596_88172746_88174606_88174728_88176207_88176320_88188842_88188947_88190452_88190623_88192603_88192831_88194837
transcript_48026.known	chr12	-	5441	10	FSM	ENSG00000049130.16	ENST00000644744.1	5441	10	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	3.09120616516523	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTACCCTGTCATTTT	-88579981	True	NA	NA	False	AATAAA	-19	NA	88580471	88492792	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_88497182_88505158_88505236_88506310_88506379_88507027_88507138_88515533_88515618_88516333_88516491_88518696_88518868_88532440_88532504_88545751_88545866_88580263
transcript_48030.known	chr12	-	5737	9	FSM	ENSG00000049130.16	ENST00000347404.10	5737	9	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	4.52769256906871	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTACCCTGTCATTTT	NA	False	NA	NA	False	AATAAA	-19	NA	88580851	88492792	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_88497182_88505158_88505236_88506310_88506379_88507027_88507138_88516333_88516491_88518696_88518868_88532440_88532504_88545751_88545866_88580263
transcript_48031.known	chr12	+	493	3	FSM	ENSG00000281333.2	ENST00000625763.1	493	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTCTACCTACAGGTTA	88580400	True	NA	NA	False	NA	NA	NA	88580530	88598218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_88580611_88581996_88582139_88597947
transcript_48033.known	chr12	-	3627	3	FSM	ENSG00000139318.8	ENST00000279488.8	3627	3	0	0	0	0	multi-exon	TRUE	canonical	3	410	junction_2	47.5	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTAGAACGTACTTATAT	-89342847	True	NA	NA	False	AATAAA	-23	NA	89352501	89347234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_89349562_89350587_89351026_89351639
transcript_48036.known	chr12	-	1959	2	FSM	ENSG00000139318.8	ENST00000308385.6	1959	2	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAGAATAAAAA	-89352355	False	NA	-48	True	NA	NA	NA	89352405	89348368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_89349562_89351639
transcript_48042.known	chr12	+	2257	1	FSM	ENSG00000274021.1	ENST00000611513.1	2257	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTAGGTCAGTCCAGTGC	89350869	False	NA	NA	False	ATTAAA	-24	NA	89351014	89353271	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_89351000_89353300
transcript_48045.known	chr12	-	1392	12	FSM	ENSG00000139323.14	ENST00000547496.5	1392	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	44.7588580272199	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAAATTCATTTTCAT	-89524700	True	NA	NA	False	NA	NA	NA	89526000	89421153	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_89421258_89425160_89425380_89459637_89459719_89460015_89460039_89466769_89466923_89467616_89467686_89470360_89470495_89471613_89471730_89472167_89472276_89491935_89492116_89525119_89525205_89525880
transcript_48047.known	chr12	-	3024	12	FSM	ENSG00000139323.14	ENST00000313546.8	3024	12	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_9	23.8490431569934	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTCCTTTTCTTTTTAA	-89524747	True	NA	NA	False	AATAAA	-25	NA	89526047	89419717	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_89421258_89425160_89425380_89459637_89459719_89466769_89466923_89467616_89467686_89470360_89470495_89471613_89471730_89472167_89472276_89491935_89492116_89497170_89497343_89525119_89525205_89525880
transcript_48050.nic	chr12	-	2954	11	NIC	ENSG00000139323.14	novel	3024	12	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	32.3196534634887	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTCCTTTTCTTTTTAA	-89524758	True	NA	NA	False	AATAAA	-25	NA	89526058	89419717	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_89421258_89425160_89425380_89466769_89466923_89467616_89467686_89470360_89470495_89471613_89471730_89472167_89472276_89491935_89492116_89497170_89497343_89525119_89525205_89525880
transcript_48056.known	chr12	-	1727	10	FSM	ENSG00000139323.14	ENST00000539190.6	1727	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	38.4171386650526	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTAACATTAAAGTCCTG	-89524693	True	NA	NA	False	NA	NA	NA	89525993	89460709	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_89461307_89466769_89466923_89467616_89467686_89470360_89470495_89471613_89471730_89472167_89472276_89491935_89492116_89497170_89497343_89525119_89525205_89525880
transcript_4806.known	chr1	-	1392	4	FSM	ENSG00000127423.11	ENST00000538789.5	1392	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	78.0185163207356	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATAATAGCTTGAGTACT	-25856411	True	NA	NA	False	AATAAA	-18	NA	25859458	25831912	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_25832159_25835021_25835847_25837412_25837555_25859279
transcript_48072.known	chr12	-	2207	3	FSM	ENSG00000259075.6	ENST00000547474.1	2207	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	57	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAGTTAAACCCAACTAT	NA	False	NA	NA	False	AGTAAA	-17	NA	89526262	89521933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_89523674_89525119_89525205_89525880
transcript_48074.known	chr12	-	5436	3	FSM	ENSG00000259075.6	ENST00000548729.5	5436	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	55	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGATTATTTTAGCCTAT	NA	False	NA	NA	False	AATAAA	-30	NA	89526198	89519407	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_89524441_89525119_89525205_89525880
transcript_48077.nic	chr12	-	5242	21	NIC	ENSG00000070961.16	novel	7062	21	NA	NA	-73	747	combination_of_known_junctions	FALSE	canonical	3	158	junction_20	22.155078424596	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTTCAGCTTCTTTACT	-89705925	True	NA	-29	True	AATAAA	-45	NA	89709373	89589780	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_89591296_89599116_89599300_89601325_89601434_89603042_89603255_89603711_89603926_89604154_89604347_89609936_89610044_89610420_89610509_89611192_89611373_89616801_89617040_89619998_89620241_89621548_89621792_89624182_89624398_89626453_89626616_89627677_89627717_89630504_89630646_89634777_89634904_89634996_89635252_89642157_89642356_89655678_89656108_89709218
transcript_48078.known	chr12	-	7062	21	FSM	ENSG00000070961.16	ENST00000428670.8	7062	21	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_20	38.2480064839986	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGACTGAACTTTTTGGA	-89708823	False	NA	-9	True	AATAAA	-24	NA	89708838	89588048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_89591296_89599116_89599300_89601325_89601434_89603042_89603255_89603711_89603926_89604154_89604347_89609936_89610044_89610420_89610509_89611192_89611373_89616801_89617040_89619998_89620241_89621548_89621792_89624182_89624398_89626453_89626616_89627677_89627717_89630504_89630646_89634777_89634904_89634996_89635252_89642157_89642356_89655678_89656108_89708595
transcript_4808.known	chr1	-	2161	3	FSM	ENSG00000127423.11	ENST00000374298.4	2161	3	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	35	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTTGTGATAATTGGTAA	-25856410	True	NA	-11	True	AATAAA	-14	NA	25859457	25834005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_25835847_25837412_25837555_25859279
transcript_48085.nic	chr12	-	1903	6	ISM	ENSG00000070961.16	ENST00000428670.8	7062	21	-511	42456	-49	11318	5prime_fragment	FALSE	canonical	3	55	junction_5	59.454184041159	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGAATAACAATTTTCTA	-89705901	True	NA	NA	False	AAAAAG	-11	NA	89709349	89630504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_89630646_89634777_89634904_89634996_89635252_89642157_89642356_89655678_89656108_89708595
transcript_48086.nic	chr12	-	1594	6	NIC	ENSG00000070961.16	novel	7062	21	NA	NA	-363	11318	combination_of_known_junctions	FALSE	canonical	3	158	junction_5	19.2520128817742	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGAATAACAATTTTCTA	NA	False	NA	NA	False	AAAAAG	-11	NA	89709663	89630504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_89630646_89634777_89634904_89634996_89635252_89642157_89642356_89655678_89656108_89709218
transcript_48089.known	chr12	-	607	2	FSM	ENSG00000070961.16	ENST00000551310.1	607	2	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTATGACATAATTATAGT	-89709285	False	NA	NA	False	TATAAA	-33	NA	89709300	89655582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_89656108_89709218
transcript_48092.known	chr12	-	4629	2	FSM	ENSG00000133639.6	ENST00000256015.5	4629	2	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	0	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGACTGTTATTTATGA	-92144307	True	NA	NA	False	AATAAA	-15	NA	92145846	92140277	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_92144448_92145387
transcript_48094.known	chr12	+	472	1	FSM	ENSG00000245904.5	ENST00000618125.1	472	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTGTAGACATTCAAGT	92146256	False	NA	NA	False	AATAAA	-30	NA	92146446	92146918	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_92146400_92146900
transcript_48097.nic	chr12	-	2794	19	ISM	ENSG00000102189.17	ENST00000322349.13	9839	29	-36	31908	0	120	5prime_fragment	FALSE	canonical	3	37	junction_12	7.84573486395988	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGAAAATGGAGAAAGAAGC	-92926798	True	NA	NA	False	NA	NA	NA	92929331	92802544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_92802735_92809016_92809157_92811278_92811435_92812979_92813094_92816199_92816401_92819307_92819512_92826165_92826286_92827911_92828062_92832511_92832851_92842464_92842582_92851110_92851267_92852174_92852297_92852911_92853026_92853914_92853955_92857274_92857341_92857430_92857486_92864859_92864988_92891628_92891722_92929042
transcript_48099.nic	chr12	-	1881	14	ISM	ENSG00000102189.17	ENST00000322349.13	9839	29	-16	48763	16	-6396	5prime_fragment	FALSE	canonical	3	37	junction_7	6.59119010363443	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGATCTTTATGCAAAA	-92926778	True	NA	NA	False	AGTAAA	-29	NA	92929311	92819399	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_92819512_92826165_92826286_92827911_92828062_92832511_92832851_92842464_92842582_92851110_92851267_92852174_92852297_92852911_92853026_92853914_92853955_92857274_92857341_92857430_92857486_92864859_92864988_92891628_92891722_92929042
transcript_4810.known	chr1	-	2685	3	FSM	ENSG00000182749.6	ENST00000675840.1	2685	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTTGTTTTTTGTCTCC	-25875159	True	NA	-2	True	AATAAA	-19	NA	25875708	25861483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_25863862_25870608_25870695_25875487
transcript_48105.nic	chr12	-	693	7	ISM	ENSG00000102189.17	ENST00000322349.13	9839	29	-12	82343	-12	4466	5prime_fragment	FALSE	canonical	3	46	junction_1	4.42216638714053	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAATATTAAGCAAATGA	-92926774	True	NA	4	True	NA	NA	NA	92929307	92852979	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_92853026_92853914_92853955_92857274_92857341_92857430_92857486_92864859_92864988_92891628_92891722_92929042
transcript_48107.nic	chr12	-	601	4	ISM	ENSG00000102189.17	ENST00000322349.13	9839	29	-87	86809	-51	0	5prime_fragment	FALSE	canonical	3	46	junction_1	1.63299316185545	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCTTCACTTAAGGTAAG	NA	False	NA	NA	False	NA	NA	NA	92929382	92857445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_92857486_92864859_92864988_92891628_92891722_92929042
transcript_48108.known	chr12	+	9753	5	FSM	ENSG00000173598.14	ENST00000337179.9	9753	5	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_3	226.48220128743	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGTGGTTCATTTTT	93366893	True	NA	NA	False	AGTAAA	-27	NA	93377882	93408146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_93378422_93394608_93394720_93395488_93395534_93398767_93398856_93399176
transcript_48112.known	chr12	+	9708	5	FSM	ENSG00000173598.14	ENST00000415493.7	9708	5	0	0	0	0	multi-exon	FALSE	canonical	3	476	junction_3	139.221047259385	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGTGGTTCATTTTT	93366935	True	NA	NA	False	AGTAAA	-27	NA	93377924	93408146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_93378422_93394608_93394720_93395488_93395534_93398770_93398856_93399176
transcript_48116.known	chr12	+	1419	5	FSM	ENSG00000173598.14	ENST00000547014.5	1419	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	348.938658649339	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATTTAGCATGCTCAGT	93378443	True	NA	NA	False	AGTAAA	-30	NA	93378577	93400138	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_93378791_93394608_93394720_93395488_93395534_93398767_93398856_93399176
transcript_48117.known	chr12	+	3607	5	FSM	ENSG00000173598.14	ENST00000549992.5	3607	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	330.185175318336	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACACACACATGAACTCAG	93378415	True	NA	44	True	AATAAA	-40	NA	93378549	93402301	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_93378791_93394608_93394720_93395488_93395534_93398770_93398856_93399176
transcript_48123.known	chr12	-	4877	4	FSM	ENSG00000177889.10	ENST00000318066.7	4877	4	0	0	0	0	multi-exon	FALSE	canonical	3	2585	junction_2	67.6806225345679	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTAATATATTGTTTGTT	-93413631	True	NA	NA	False	AATAAA	-23	NA	93441947	93405683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_93410080_93410733_93410875_93411052_93411300_93441854
transcript_48124.known	chr12	-	676	4	FSM	ENSG00000177889.10	ENST00000549490.1	676	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	1265.24156674614	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTAAGTATAAAGCACTGT	-93413582	True	NA	NA	False	TTTAAA	-43	NA	93441898	93409762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_93410080_93410733_93410875_93411125_93411300_93441854
transcript_48130.known	chr12	-	607	3	FSM	ENSG00000177889.10	ENST00000552442.1	607	3	0	0	0	0	multi-exon	FALSE	canonical	2	36	junction_1	1305	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCCCCTCCCTGCTTTTA	-93413619	True	NA	81	True	TTTAAA	-5	NA	93441935	93409800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_93410080_93411052_93411300_93441854
transcript_48132.known	chr12	-	3018	2	FSM	ENSG00000177889.10	ENST00000550657.1	3018	2	0	0	0	0	multi-exon	FALSE	canonical	3	2646	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAGCTTTTGATGACTG	-93413627	True	NA	-15	True	ATTAAA	-17	NA	93441943	93408370	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_93411300_93441854
transcript_48136.known	chr12	+	725	7	FSM	ENSG00000198015.14	ENST00000551396.5	725	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	1054.04149454479	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTTAGAGAAACCTATTT	93451155	True	NA	25	True	TATAAA	-22	NA	93467539	93501385	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_93467555_93469188_93469356_93470485_93470506_93476953_93477018_93479387_93479473_93487496_93487661_93501175
transcript_48139.known	chr12	+	2105	7	FSM	ENSG00000198015.14	ENST00000358678.7	2105	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	1009.02240917743	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCGATGGTGTATTCTT	93451133	True	NA	19	True	GATAAA	-19	NA	93467517	93502661	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_93467555_93469191_93469356_93470485_93470591_93476953_93477018_93479387_93479473_93487496_93487661_93501175
transcript_48150.known	chr12	+	1983	6	FSM	ENSG00000198015.14	ENST00000393128.8	1983	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	931.808263539233	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACCAGCTTTGTCGATGG	93451132	True	NA	10	True	ATTAAA	-37	NA	93467516	93502652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_93467555_93469191_93469356_93476953_93477018_93479387_93479473_93487496_93487661_93501184
transcript_48160.known	chr12	-	2097	5	FSM	ENSG00000246985.8	ENST00000500986.6	2097	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	6.29980158417708	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGTAAATAAATGTGGCAA	-93571580	True	NA	NA	False	NA	NA	NA	93571768	93542021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_93543306_93545070_93545359_93566743_93566971_93567063_93567160_93571566
transcript_48166.known	chr12	+	2761	3	FSM	ENSG00000120833.14	ENST00000340600.6	2761	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	173.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTACCTTATTTTCATG	NA	False	NA	NA	False	AATAAA	-15	NA	93569813	93576745	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_93570199_93572684_93573037_93574721
transcript_48167.known	chr12	+	1065	3	FSM	ENSG00000120833.14	ENST00000536696.6	1065	3	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	135.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGTCTCACATAGAGTAT	93570114	True	NA	NA	False	TATAAA	-31	NA	93570979	93575197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_93571217_93572684_93573037_93574721
transcript_48168.nic	chr12	+	2376	3	NIC	ENSG00000120833.14	novel	2391	3	NA	NA	-63	0	intron_retention	FALSE	canonical	3	45	junction_1	152.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCACTTATTGAGTTCTA	93571807	False	NA	17	True	AATAAA	-20	NA	93571836	93576206	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_93572376_93572684_93573037_93574721
transcript_48169.known	chr12	+	2072	3	FSM	ENSG00000120833.14	ENST00000549206.5	2072	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	168.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTATTAAATAAAAAAAACC	93570254	True	NA	-15	True	NA	NA	NA	93570398	93576174	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_93570666_93572684_93573037_93574721
transcript_4817.known	chr1	-	1712	5	FSM	ENSG00000117632.23	ENST00000399728.5	1712	5	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_4	1571.22730691648	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCCTGTGAAATGACTAA	-25906142	False	NA	-45	True	AATAAA	-21	NA	25906153	25900117	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_25901088_25901490_25901683_25903640_25903814_25904663_25904739_25905851
transcript_48170.known	chr12	+	2391	3	FSM	ENSG00000120833.14	ENST00000549122.5	2391	3	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	122	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCACTTATTGAGTTCTA	93571346	False	NA	17	True	AATAAA	-20	NA	93571360	93576206	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_93571915_93572684_93573037_93574721
transcript_48171.known	chr12	+	984	3	FSM	ENSG00000120833.14	ENST00000549887.1	984	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	156	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCAGCATCTCTGTAGG	93569915	True	NA	NA	False	NA	NA	NA	93571899	93575066	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_93572187_93572684_93573037_93574721
transcript_48172.nnic	chr12	+	2233	3	NNC	ENSG00000120833.14	novel	2391	3	NA	NA	-21	0	intron_retention	FALSE	canonical	3	26	junction_1	162	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCACTTATTGAGTTCTA	93569894	True	NA	17	True	AATAAA	-20	NA	93571878	93576206	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_93572275_93572684_93573037_93574721
transcript_48173.known	chr12	+	3733	2	FSM	ENSG00000120833.14	ENST00000548537.1	3733	2	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCACTTATTGAGTTCTA	93571461	True	NA	17	True	AATAAA	-20	NA	93571703	93576206	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_93571915_93572684
transcript_48174.known	chr12	+	2386	2	FSM	ENSG00000120833.14	ENST00000551556.2	2386	2	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTACCTTATTTTCATG	93572211	True	NA	NA	False	AATAAA	-15	NA	93572674	93576745	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_93573037_93574721
transcript_48175.known	chr12	+	1189	3	FSM	ENSG00000169372.13	ENST00000332896.8	1189	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	8	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACCGTGTTGGGTTTTTTT	93676836	True	NA	39	True	AATAAA	-41	NA	93677374	93850756	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_93677473_93678768_93679073_93849969
transcript_48178.known	chr12	-	3130	16	FSM	ENSG00000173588.16	ENST00000339839.9	3130	16	0	0	0	0	multi-exon	FALSE	canonical	1	31	junction_3	24.8554934683574	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTGTGTTTAATTTTACAT	-94457563	True	NA	0	True	ATTAAA	-20	NA	94459946	94308279	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_94308918_94309917_94310108_94312913_94313018_94331699_94331830_94333481_94333640_94335588_94335665_94367793_94367944_94368056_94368202_94369921_94370037_94375885_94376018_94378790_94379043_94400849_94400982_94403169_94403263_94411696_94411848_94412317_94412592_94459556
transcript_4819.known	chr1	-	1443	5	FSM	ENSG00000117632.23	ENST00000455785.7	1443	5	0	0	0	0	multi-exon	FALSE	canonical	3	2927	junction_4	395.159777811457	2882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCTGTGAAATGACTAAAG	-25847893	True	NA	-43	True	AATAAA	-23	NA	25906419	25900115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_25901088_25901490_25901683_25903640_25903814_25904663_25904739_25906388
transcript_48195.known	chr12	+	2482	1	FSM	ENSG00000278916.1	ENST00000623122.1	2482	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTATGCCAATAAATTCAG	94459874	True	NA	NA	False	ATTAAA	-17	NA	94460002	94462484	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_94460000_94462500
transcript_48197.known	chr12	-	5874	4	FSM	ENSG00000057704.13	ENST00000261226.9	5874	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	3.2659863237109	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTTGGAGCCCATCTC	-94650297	True	NA	NA	False	AATAAA	-24	NA	94650557	94567121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_94571738_94578393_94578530_94581621_94582539_94650352
transcript_48202.known	chr12	-	698	5	FSM	ENSG00000184752.14	ENST00000684171.1	698	5	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	1909.83603681049	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCGTGCCTTTTTGCCC	-94991560	True	NA	NA	False	ATTAAA	-20	NA	95003713	94971327	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_94971621_94974170_94974286_94994169_94994258_95002738_95002822_95003594
transcript_48204.known	chr12	-	562	4	FSM	ENSG00000184752.14	ENST00000327772.7	562	4	0	0	0	0	multi-exon	FALSE	canonical	3	2966	junction_1	623.193032338741	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGTCTTTCGTGCCTTTT	-94991544	True	NA	NA	False	ATTAAA	-15	NA	95003697	94971332	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_94971621_94994169_94994258_95002738_95002822_95003594
transcript_48205.known	chr12	-	276	3	FSM	ENSG00000184752.14	ENST00000547157.1	276	3	0	0	0	0	multi-exon	FALSE	canonical	3	963	junction_1	1694.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCTTTCGTGCCTTTTT	-94991547	True	NA	NA	False	ATTAAA	-16	NA	95003700	94971331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_94971486_95002805_95002822_95003594
transcript_48206.known	chr12	-	487	3	FSM	ENSG00000184752.14	ENST00000547986.5	487	3	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_1	2031	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAATGTCTTTCGTGCCT	-94991560	True	NA	NA	False	ATTAAA	-12	NA	95003713	94971335	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_94971621_95002738_95002822_95003594
transcript_48207.known	chr12	-	2707	6	FSM	ENSG00000184752.14	ENST00000552205.6	2707	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1865.48059223354	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTCCATCTCAAAAAAAGAA	-94991555	True	NA	NA	False	NA	NA	NA	95003708	94895296	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_94897311_94924645_94924807_94928016_94928264_94994169_94994258_95002738_95002822_95003594
transcript_48213.known	chr12	-	4058	14	FSM	ENSG00000120798.17	ENST00000333003.10	4058	14	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_3	18.0128159503599	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTGCTTATCCTTCGTT	-95069410	True	NA	NA	False	AATATA	-20	NA	95073618	95020228	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_95022404_95025149_95025256_95028386_95028525_95031348_95031489_95040475_95040598_95049067_95049234_95051761_95051944_95057552_95057644_95057730_95057879_95058309_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
transcript_4822.known	chr1	-	2947	4	FSM	ENSG00000117632.23	ENST00000465604.1	2947	4	0	0	0	0	multi-exon	FALSE	canonical	3	2927	junction_3	438.453595669548	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGCAGTGACTTCTTTTG	-25847891	True	NA	-15	True	AATAAA	-17	NA	25906417	25900567	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_25901088_25901490_25903814_25904663_25904739_25906388
transcript_48242.known	chr12	-	1561	11	FSM	ENSG00000120798.17	ENST00000622476.4	1561	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	48.238573776595	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCATGGTTAAACTCTGCA	-95069420	True	NA	NA	False	AAGAAA	-43	NA	95073628	95028457	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_95028510_95040475_95040598_95049067_95049234_95051761_95051944_95057552_95057644_95057730_95057879_95058309_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
transcript_48243.known	chr12	-	2499	11	FSM	ENSG00000120798.17	ENST00000552861.5	2499	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	48.3517321302971	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTCTAGTCATATTTA	-95069361	True	NA	-3	True	AATAAA	-20	NA	95073569	95021892	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_95022404_95025149_95025256_95028386_95028510_95049067_95049234_95051761_95051944_95057552_95057644_95057730_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
transcript_48244.known	chr12	-	1822	12	FSM	ENSG00000120798.17	ENST00000393101.7	1822	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	43.3282684049941	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTTCAGTTTTTTTCT	-95069372	True	NA	0	True	AATAAA	-26	NA	95073580	95030408	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_95030630_95031348_95031489_95040475_95040598_95049067_95049234_95051761_95051944_95057552_95057644_95057730_95057879_95058309_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
transcript_48245.known	chr12	-	9291	21	FSM	ENSG00000180263.14	ENST00000343958.9	9291	21	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_20	10.7870292481294	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTGGTGTGATTTTTT	-95217446	False	NA	NA	False	AATAAA	-15	NA	95217467	95076748	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_95081557_95084497_95084647_95085779_95085909_95089568_95089697_95091706_95091810_95092698_95092846_95094591_95094695_95105006_95105087_95106953_95107038_95107562_95107632_95108347_95108420_95108502_95108562_95113650_95113702_95134738_95134827_95137521_95137679_95141387_95141540_95152810_95152842_95152925_95152994_95172599_95172745_95208842_95211268_95217224
transcript_48249.known	chr12	-	2232	20	FSM	ENSG00000180263.14	ENST00000451107.3	2232	20	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_19	14.7953724891066	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGAAATTGTTTTGTTA	-95217461	False	NA	-90	True	TATAAA	-39	NA	95217482	95081397	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_95081557_95084497_95084647_95085779_95085909_95089568_95089697_95091706_95091810_95092698_95092846_95094591_95094695_95105006_95105087_95106953_95107038_95107562_95107632_95108347_95108420_95108502_95108562_95113650_95113702_95134738_95134827_95137521_95137679_95141387_95141540_95152810_95152842_95152925_95152994_95172599_95172745_95217224
transcript_48252.nic	chr12	-	4338	18	ISM	ENSG00000180263.14	ENST00000546711.5	4568	19	-156	4046	-138	2118	5prime_fragment	FALSE	canonical	3	40	junction_17	9.23585610879055	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAGCTGCTCTCAAAGAA	-95217599	False	NA	NA	False	NA	NA	NA	95217620	95089588	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_95089697_95091706_95091810_95092698_95092846_95094591_95094695_95105006_95105087_95106953_95107038_95107562_95107632_95108347_95108420_95108502_95108562_95113650_95113702_95134738_95134827_95137521_95137679_95141387_95141540_95152810_95152842_95152925_95152994_95172599_95172745_95208842_95211268_95217224
transcript_48257.known	chr12	-	4568	19	FSM	ENSG00000180263.14	ENST00000546711.5	4568	19	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_18	9.64493086330974	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGTGTGACTACTAATTACT	-95215970	True	NA	NA	False	ATTAAA	-19	NA	95217464	95085542	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_95085909_95089568_95089697_95091706_95091810_95092698_95092846_95094591_95094695_95105006_95105087_95106953_95107038_95107562_95107632_95108347_95108420_95108502_95108562_95113650_95113702_95134738_95134827_95137521_95137679_95141387_95141540_95152810_95152842_95152925_95152994_95172599_95172745_95208842_95211268_95217224
transcript_48260.known	chr12	+	2712	13	FSM	ENSG00000028203.19	ENST00000552660.5	2712	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	90.1241042489004	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCAATCTTGGAAATTCTT	95214234	True	NA	8	True	AATAAA	-26	NA	95217811	95300921	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_95217887_95251939_95252072_95256549_95256623_95257149_95257240_95262905_95263082_95266356_95266633_95270038_95270189_95274741_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95300164
transcript_48262.known	chr12	+	3002	13	FSM	ENSG00000028203.19	ENST00000547997.5	3002	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	88.7716718453709	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATGTGTGCTGGGGTTTG	95214183	True	NA	14	True	AATAAA	-18	NA	95217760	95301172	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_95217887_95251939_95252072_95256549_95256623_95257149_95257240_95262905_95263082_95266356_95266633_95270050_95270189_95274741_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95300164
transcript_4827.known	chr1	-	1783	2	FSM	ENSG00000117632.23	ENST00000513116.1	1783	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTCAGTTGCCATGTC	-25892296	False	NA	NA	False	AATAAA	-22	NA	25892607	25884180	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_25885870_25892513
transcript_48271.known	chr12	+	2629	12	FSM	ENSG00000028203.19	ENST00000549192.5	2629	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	92.1317777035151	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	95214246	True	NA	NA	False	AAAAAG	-12	NA	95217823	95296956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_95217887_95251939_95252072_95256549_95256623_95257149_95257240_95262905_95263082_95266356_95266633_95270050_95270189_95274741_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050
transcript_48274.known	chr12	+	2362	12	FSM	ENSG00000028203.19	ENST00000551994.5	2362	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	92.9803142765995	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAGATAGAAGAAAAGTAAG	95214240	True	NA	NA	False	AATAAA	-3	NA	95217817	95300654	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_95217887_95251939_95252072_95257153_95257240_95262905_95263082_95266356_95266633_95270038_95270189_95274741_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95300164
transcript_48277.known	chr12	+	4510	12	FSM	ENSG00000028203.19	ENST00000436874.6	4510	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	76.1009551313308	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTCTTCTTGCCATGA	95214229	True	NA	103	True	AATAAA	-23	NA	95217806	95302799	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_95217887_95251939_95252072_95257149_95257240_95262905_95263082_95266356_95266633_95270050_95270189_95274741_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95300164
transcript_4828.known	chr1	-	1137	5	FSM	ENSG00000117632.23	ENST00000357865.6	1137	5	0	0	0	0	multi-exon	FALSE	canonical	2	96	junction_4	1612.29066470658	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTTAATAAAACTGCACAG	-25906980	False	NA	-42	True	NA	NA	NA	25906991	25900594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_25901088_25901490_25901683_25903640_25903814_25904663_25904739_25906787
transcript_4829.known	chr1	-	948	5	FSM	ENSG00000117632.23	ENST00000426559.6	948	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1588.08066152195	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTCTTGCCTTGATGGT	-25847940	True	NA	NA	False	NA	NA	NA	25906466	25885439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_25885870_25901490_25901683_25903640_25903814_25904663_25904739_25906388
transcript_48295.known	chr12	+	1874	11	FSM	ENSG00000111142.14	ENST00000551840.5	1874	11	0	0	0	0	multi-exon	TRUE	canonical	3	209	junction_1	188.79872880928	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTTTCAGATCTGAGAG	95464216	True	NA	27	True	AATAAA	-1	NA	95474161	95514326	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_95474331_95476073_95476179_95483214_95483281_95485878_95485982_95494055_95494218_95494956_95495139_95496003_95496099_95504064_95504162_95511894_95511999_95512800_95512917_95513651
transcript_48297.known	chr12	+	1862	11	FSM	ENSG00000111142.14	ENST00000546753.5	1862	11	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	248.128515088452	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGAATCCATTTTCTAAA	95474070	False	NA	0	True	NA	NA	NA	95474080	95514299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_95474331_95476070_95476179_95483214_95483281_95485947_95485982_95494055_95494218_95494956_95495139_95496003_95496099_95504064_95504162_95511894_95511999_95512800_95512917_95513651
transcript_48298.known	chr12	+	2431	10	FSM	ENSG00000111142.14	ENST00000535095.5	2431	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	248.909076562229	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTACATCTCAATGTCT	NA	False	NA	43	True	AATAAA	-17	NA	95473519	95514342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_95474331_95476070_95476179_95483214_95483281_95485878_95485982_95494055_95494218_95494956_95495139_95496003_95496099_95504064_95504162_95512800_95512917_95513651
transcript_48315.known	chr12	-	3161	6	FSM	ENSG00000136014.12	ENST00000393091.6	3161	6	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_5	278.039277800817	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAGAAAAAATTATAGGGC	-95542272	True	NA	NA	False	AATAGA	-7	NA	95548844	95517275	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_95518354_95520996_95521203_95524679_95524789_95528806_95529003_95532828_95534327_95548770
transcript_48316.known	chr12	-	4008	6	FSM	ENSG00000136014.12	ENST00000258499.8	4008	6	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_5	253.02442569839	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGTCTACTCTTTTCTA	-95545579	True	NA	-2	True	ATTAAA	-21	NA	95551476	95516559	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_95518354_95520996_95521203_95524679_95524789_95528806_95529003_95532828_95534327_95551271
transcript_48321.known	chr12	-	2499	6	FSM	ENSG00000136014.12	ENST00000537435.2	2499	6	0	0	0	0	multi-exon	FALSE	canonical	2	32	junction_5	367.900530034954	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAAGACAATGGGGTTTT	-95548256	False	NA	NA	False	AATGAA	-37	NA	95548272	95518153	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_95518354_95520996_95521203_95524679_95524789_95528806_95529003_95532828_95534327_95547982
transcript_48323.nic	chr12	-	3571	6	NIC	ENSG00000136014.12	novel	4008	6	NA	NA	-11	179	combination_of_known_junctions	FALSE	canonical	3	214	junction_5	297.532922548077	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAAGCTATCTATCTAAA	-95542258	True	NA	NA	False	ATTAAA	-15	NA	95548830	95517096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_95518354_95520996_95521203_95524679_95524789_95528806_95529003_95532828_95534327_95548525
transcript_4833.known	chr1	-	3487	11	FSM	ENSG00000158006.14	ENST00000374282.8	3487	11	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_10	9.37869927015468	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTGTTGGCTTGCTCTT	-25997147	True	NA	-7	True	AAAAAG	-16	NA	25998063	25959766	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_25962084_25972557_25972713_25974479_25974651_25976681_25976774_25982363_25982478_25983945_25984088_25984459_25984529_25988230_25988328_25989447_25989602_25990726_25990864_25998024
transcript_48341.nic	chr12	-	2364	2	ISM	ENSG00000136014.12	ENST00000258499.8	4008	6	0	15608	0	1596	5prime_fragment	FALSE	canonical	3	331	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCCAAAGAAAGAAAGAAAAT	-95545579	True	NA	NA	False	NA	NA	NA	95551476	95532167	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_95534327_95551271
transcript_48344.known	chr12	-	677	2	FSM	ENSG00000136014.12	ENST00000549639.1	677	2	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAACTCGTAGTGGGAGG	-95542226	True	NA	NA	False	NA	NA	NA	95548798	95533922	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_95534327_95548525
transcript_48345.nic	chr12	-	738	2	ISM	ENSG00000136014.12	ENST00000393091.6	3161	6	-44	16431	-44	57	5prime_fragment	FALSE	canonical	3	265	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGTAGTAAAAAGAGAAGTA	-95548872	False	NA	NA	False	AAAAAG	-26	NA	95548888	95533706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_95534327_95548770
transcript_48346.nic	chr12	-	881	2	ISM	ENSG00000136014.12	ENST00000258499.8	4008	6	-56	17147	-56	57	5prime_fragment	FALSE	canonical	3	331	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGTAGTAAAAAGAGAAGTA	-95551516	False	NA	NA	False	AAAAAG	-26	NA	95551532	95533706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_95534327_95551271
transcript_48347.known	chr12	-	666	3	FSM	ENSG00000136014.12	ENST00000551837.1	666	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	25	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTGAACAATCACCCATT	-95542247	True	NA	NA	False	NA	NA	NA	95548819	95533763	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_95534327_95535372_95535427_95548770
transcript_48349.known	chr12	-	3621	10	FSM	ENSG00000074527.13	ENST00000343702.9	3621	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	2.49443825784929	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTCTCATTTCTTAAC	-95790704	True	NA	NA	False	AATAAA	-15	NA	95790764	95657806	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_95659223_95665809_95665981_95670077_95670147_95682706_95682823_95683497_95683712_95710440_95710630_95713211_95713339_95737865_95738145_95786938_95787469_95790254
transcript_4835.known	chr1	-	2523	11	FSM	ENSG00000158006.14	ENST00000374284.5	2523	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	24.204131878669	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGCCACTCCCAGAGAGG	-25997128	True	NA	NA	False	AATAAA	-18	NA	25998044	25960769	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_25962084_25972557_25972713_25974479_25974651_25976681_25976774_25982363_25982478_25983945_25984088_25984459_25984529_25988230_25988328_25989447_25989602_25990726_25990922_25998024
transcript_48352.known	chr12	-	396	2	FSM	ENSG00000258343.2	ENST00000551893.1	396	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAATCTCACTAGTTTTT	-95858771	True	NA	NA	False	ATTAAA	-22	NA	95858798	95858236	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_95858588_95858753
transcript_48353.known	chr12	+	1389	4	FSM	ENSG00000139343.11	ENST00000266735.10	452	4	-24	-913	-24	602	multi-exon	FALSE	canonical	3	5074	junction_3	182.93411078552	690	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATGTCTTACTGCTTTT	95779309	True	NA	NA	False	AATACA	-19	NA	95858927	95867053	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_95859077_95861167_95861294_95865323_95865389_95866004
transcript_48355.known	chr12	+	2226	9	FSM	ENSG00000139344.8	ENST00000266736.7	2226	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	1.57619002661481	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAGTTGATTTGAAATCT	95943312	True	NA	NA	False	TATAAA	-20	NA	95943330	95968720	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_95943536_95952716_95952824_95954910_95954976_95956684_95956963_95960397_95960624_95962354_95962480_95965685_95965780_95966347_95966509_95967755
transcript_48362.known	chr12	-	2140	19	FSM	ENSG00000111144.10	ENST00000228740.7	2140	19	0	0	0	0	multi-exon	TRUE	canonical	3	1035	junction_13	124.224023540905	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAATTTTCTCTCAGTAT	-96011596	True	NA	-4	True	ATTAAA	-20	NA	96035587	96000752	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_96001107_96002959_96003065_96003837_96003921_96006313_96006410_96009093_96009149_96013187_96013259_96013749_96013854_96014854_96015000_96015582_96015695_96017043_96017115_96017556_96017581_96018762_96018904_96019167_96019241_96021084_96021138_96022146_96022252_96024478_96024548_96027443_96027565_96029054_96029186_96035360
transcript_48366.nic	chr12	-	2031	18	NIC	ENSG00000111144.10	novel	2140	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	219	junction_2	281.787251953174	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAGTGGCATATTCTTTG	NA	False	NA	-10	True	AATAAA	-17	NA	96035641	96000832	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_96001107_96002959_96003065_96006313_96006410_96009093_96009149_96013187_96013259_96013749_96013854_96014854_96015000_96015582_96015695_96017043_96017115_96017556_96017581_96018762_96018904_96019167_96019241_96021084_96021138_96022146_96022252_96024478_96024548_96027443_96027565_96029054_96029186_96035360
transcript_48371.known	chr12	-	1810	18	FSM	ENSG00000111144.10	ENST00000548852.5	1810	18	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_16	428.911876641199	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATGAAGTTTACCCGGC	NA	False	NA	NA	False	NA	NA	NA	96035641	96002989	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_96003065_96003837_96003982_96006313_96006410_96009093_96009149_96013187_96013259_96013749_96013854_96014854_96015000_96015582_96015695_96017043_96017115_96017556_96017581_96018762_96018904_96019167_96019241_96021084_96021138_96022146_96022252_96024478_96024548_96027443_96027504_96029054_96029186_96035360
transcript_48377.known	chr12	+	4201	5	FSM	ENSG00000111145.8	ENST00000228741.8	4201	5	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_3	6.94172168845741	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGAGGTAACTGGATTGG	96193154	True	NA	17	True	AATAAA	-20	NA	96194374	96269824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_96194706_96223564_96223774_96246939_96247735_96259730_96259854_96267081
transcript_48382.known	chr12	-	4036	17	FSM	ENSG00000059758.8	ENST00000261211.8	4036	17	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	28.0064166754692	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCCATTTGTTACATAAAG	-96398669	True	NA	NA	False	TATAAA	-14	NA	96400439	96278260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_96280280_96280807_96280886_96282508_96282600_96283602_96283646_96286042_96286149_96286663_96286762_96289166_96289288_96294998_96295123_96297269_96297333_96297626_96297722_96298868_96298984_96300303_96300361_96311051_96311178_96313320_96313455_96323947_96324113_96334718_96334866_96399985
transcript_48384.known	chr12	-	2442	16	FSM	ENSG00000059758.8	ENST00000543119.6	2442	16	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_4	18.4217263034711	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTCATTTAAGACAGTGCT	-96398710	True	NA	NA	False	NA	NA	NA	96400480	96280423	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_96280886_96282508_96282600_96283602_96283646_96286042_96286149_96286663_96286762_96289166_96289288_96294998_96295123_96297269_96297333_96297626_96297722_96298868_96298984_96300303_96300361_96311051_96311178_96313320_96313455_96323947_96324113_96334718_96334866_96399985
transcript_48385.known	chr12	-	1769	15	FSM	ENSG00000059758.8	ENST00000542666.5	1769	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	52.3175156996162	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGATCACTGCACACGCC	-96398304	False	NA	NA	False	NA	NA	NA	96400074	96280543	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_96280886_96282508_96282600_96283602_96283646_96286042_96286149_96286663_96286762_96289166_96289288_96294998_96295123_96297269_96297333_96297626_96297722_96298868_96298984_96300303_96300361_96311051_96311178_96313320_96313455_96323947_96324113_96399985
transcript_48386.nic	chr12	+	3289	16	NIC	ENSG00000139350.12	novel	4015	16	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_2	60.6091302252942	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAAACAAACCTTTAGC	NA	False	NA	NA	False	ATTAAA	-10	NA	96907191	96953221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_96907301_96907603_96907625_96909751_96909896_96912722_96912818_96917620_96917738_96919984_96920126_96934975_96935206_96936610_96936813_96937197_96937394_96940408_96940538_96942576_96942625_96943559_96943763_96944638_96944796_96945692_96945850_96951431_96951499_96951948
transcript_48387.known	chr12	+	4015	16	FSM	ENSG00000139350.12	ENST00000266742.9	4015	16	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	51.4230385030765	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGTCAGATATTGATCC	96903455	True	NA	6	True	ATTAAA	-18	NA	96907256	96953780	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_96907301_96907603_96907857_96909751_96909896_96912722_96912818_96917620_96917738_96919984_96920126_96934975_96935206_96936610_96936813_96937197_96937394_96940408_96940538_96942576_96942625_96943559_96943763_96944638_96944796_96945692_96945850_96951431_96951499_96951948
transcript_48393.known	chr12	+	3366	15	FSM	ENSG00000139350.12	ENST00000429527.6	3366	15	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	62.0998208942831	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTGGTTTATAGCAT	96903422	True	NA	19	True	AATAAA	-20	NA	96907223	96953351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_96907301_96909751_96909896_96912722_96912818_96917620_96917738_96919984_96920126_96934975_96935206_96936610_96936813_96937197_96937394_96940408_96940538_96942576_96942625_96943559_96943763_96944638_96944796_96945692_96945850_96951431_96951499_96951948
transcript_48395.known	chr12	+	2367	15	FSM	ENSG00000139350.12	ENST00000557644.5	2367	15	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	58.4915832075218	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAACAGGATCTTTATTTT	96907410	False	NA	NA	False	ATTAAA	-34	NA	96907465	96952270	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_96907625_96909751_96909896_96912722_96912818_96917620_96917738_96919984_96920126_96934975_96935206_96936610_96936813_96937197_96937394_96940408_96940538_96942576_96942625_96943559_96943763_96944638_96944796_96945692_96945850_96951431_96951499_96951948
transcript_48399.known	chr12	+	2490	14	FSM	ENSG00000139350.12	ENST00000411739.6	2490	14	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	60.2003558148678	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTAATTTTAAAATGGCA	96903436	True	NA	NA	False	TTTAAA	-31	NA	96907237	96952475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_96907301_96907603_96907857_96917620_96917738_96919984_96920126_96934975_96935206_96936610_96936813_96937197_96937394_96940408_96940538_96942576_96942625_96943559_96943763_96944638_96944796_96945692_96945850_96951431_96951499_96951948
transcript_48429.known	chr12	+	2099	9	FSM	ENSG00000255794.10	ENST00000541282.5	2099	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.34428877022476	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAATTTATTTCTCTTTT	97464983	False	NA	18	True	AATAAA	-18	NA	97465020	97533766	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_97465072_97465667_97465728_97492460_97492607_97493180_97493286_97493874_97494003_97494694_97494882_97495930_97496057_97530654_97530860_97532675
transcript_48430.known	chr12	+	2632	9	FSM	ENSG00000255794.10	ENST00000660138.1	2632	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	9.24662100445346	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGTCTATTTCCTTTA	97462728	True	NA	18	True	AATAAA	-15	NA	97465169	97565035	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_97465728_97492460_97492607_97493176_97493286_97493874_97494003_97494694_97494882_97530654_97530860_97560536_97560699_97560796_97561048_97564149
transcript_48437.known	chr12	-	3311	1	FSM	ENSG00000227825.4	ENST00000554295.1	3311	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAAATAGTGTTACACTGT	-98457042	True	NA	NA	False	AATAAA	-33	NA	98457145	98453834	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_98453800_98457100
transcript_48438.nnic	chr12	+	3520	10	NNC	ENSG00000120802.14	novel	4136	9	NA	NA	-1	-41	intron_retention	FALSE	canonical	3	4	junction_9	216.363263352158	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTTGTCGTTGCAATAA	98483669	True	NA	12	True	AATAAA	-15	NA	98515577	98550310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_98516147_98527885_98528013_98531679_98531839_98537474_98537573_98544229_98544350_98544441_98544538_98544950_98545062_98546358_98546448_98547572_98548829_98549415
transcript_48440.nnic	chr12	+	3524	10	NNC	ENSG00000120802.14	novel	4136	9	NA	NA	-2	-39	intron_retention	FALSE	non_canonical	0	0	junction_9	217.110826793855	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTGTCGTTGCAATAAAT	98483679	True	NA	14	True	AATAAA	-17	NA	98515587	98550312	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_98516147_98527885_98528013_98531679_98531839_98537474_98537573_98544229_98544350_98544441_98544538_98544950_98545062_98546358_98546448_98547572_98548841_98549415
transcript_48441.nnic	chr12	+	3532	10	NNC	ENSG00000120802.14	novel	4136	9	NA	NA	0	-39	intron_retention	FALSE	canonical	0	0	junction_9	217.110826793855	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTGTCGTTGCAATAAAT	98483670	True	NA	14	True	AATAAA	-17	NA	98515578	98550312	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_98516147_98527885_98528013_98531679_98531839_98537474_98537573_98544229_98544350_98544441_98544538_98544950_98545062_98546358_98546448_98547572_98548850_98549425
transcript_48448.known	chr12	+	3615	4	FSM	ENSG00000120802.14	ENST00000266732.8	3615	4	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_3	184.028983224563	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTGGTCTCCAGAAACA	98483721	True	NA	30	True	AATAAA	-21	NA	98515629	98535634	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_98516147_98527885_98528013_98531679_98531839_98532822
transcript_48449.known	chr12	-	3357	2	FSM	ENSG00000257167.3	ENST00000548760.2	3357	2	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCAGACTTTCCAATTTGC	-98516289	False	NA	-4	True	AATAAA	-25	NA	98516422	98512972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_98515898_98515990
transcript_48452.known	chr12	+	5987	8	FSM	ENSG00000075415.15	ENST00000228318.8	5987	8	0	0	0	0	multi-exon	FALSE	canonical	1	46	junction_2	1274.11377763815	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTGTTGAATCATTTGT	98549613	True	NA	12	True	AATAAA	-9	NA	98593685	98606367	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_98593741_98593974_98594136_98595432_98595558_98597855_98598036_98598521_98598704_98599954_98600128_98601170_98601282_98601367
transcript_48453.known	chr12	+	1417	8	FSM	ENSG00000075415.15	ENST00000551123.5	1417	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	1439.62235694374	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCCTGTGACTTATTTT	98549623	True	NA	15	True	AATAAA	-15	NA	98593695	98601707	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_98593741_98593978_98594136_98595432_98595662_98597855_98598036_98598521_98598704_98599954_98600128_98601170_98601282_98601367
transcript_48455.known	chr12	+	1285	8	FSM	ENSG00000075415.15	ENST00000549338.5	1285	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1034.70060739268	2163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTACTGTTGAAATAAAC	98549623	True	NA	-18	True	NA	NA	NA	98593695	98601674	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_98593745_98593974_98594136_98595726_98595849_98597855_98598036_98598521_98598704_98599954_98600128_98601170_98601282_98601367
transcript_48461.known	chr12	+	3236	7	FSM	ENSG00000075415.15	ENST00000546766.5	3236	7	0	0	0	0	multi-exon	FALSE	canonical	3	2176	junction_1	314.403359114088	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTTGCAGCATGTACT	98549582	True	NA	2	True	AGTAAA	-16	NA	98593654	98601997	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_98593741_98593974_98595849_98597855_98598036_98598521_98598704_98599954_98600128_98601170_98601282_98601367
transcript_48467.known	chr12	+	580	2	FSM	ENSG00000075415.15	ENST00000551265.5	580	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCCTTTGATTTGCCCTT	98549613	True	NA	NA	False	NA	NA	NA	98593685	98594503	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_98593741_98593978
transcript_48470.known	chr12	-	1645	3	FSM	ENSG00000166130.15	ENST00000342502.6	1645	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	56.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTGCAACTTTACATAG	NA	False	NA	-14	True	AATAAA	-45	NA	98645113	98613404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_98614341_98634295_98634414_98644522
transcript_48472.known	chr12	-	2902	3	FSM	ENSG00000166130.15	ENST00000299157.5	2902	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	29.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGAACTTTGTTGTTTTA	-98642507	True	NA	NA	False	AATAAA	-17	NA	98644788	98624248	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_98626767_98634295_98634414_98644522
transcript_48477.known	chr12	-	1368	2	FSM	ENSG00000166130.15	ENST00000393042.3	1368	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTGCAACTTTACATAG	-98644940	False	NA	-14	True	AATAAA	-45	NA	98644954	98613404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_98614341_98644522
transcript_48487.nic	chr12	+	818	2	ISM	ENSG00000120868.14	ENST00000547743.1	651	3	-503	464	-122	-464	5prime_fragment	FALSE	canonical	3	69	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATCAGAAGAGGAAAAAGTA	98643199	True	NA	6	True	NA	NA	NA	98645167	98648468	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_98645836_98648318
transcript_48488.known	chr12	-	5198	21	FSM	ENSG00000111647.13	ENST00000279907.12	5198	21	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_9	15.9620644028271	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCACCCTACTGAACTTA	-100139390	True	NA	-19	True	AATAAA	-26	NA	100142874	100037071	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_100037756_100039595_100039790_100047529_100047639_100047942_100048197_100050167_100050319_100051078_100051222_100057570_100057747_100058028_100059534_100059849_100060044_100072671_100072814_100083015_100083135_100084475_100084659_100086274_100086359_100088914_100089096_100095666_100095838_100097364_100097506_100098351_100098542_100102765_100102858_100103912_100103952_100108385_100108549_100142591
transcript_48496.nic	chr12	-	3732	15	ISM	ENSG00000111647.13	ENST00000279907.12	5198	21	-70	20500	-70	-7307	5prime_fragment	FALSE	canonical	3	73	junction_3	18.239338512889	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAAGTTATGATACGGCT	NA	False	NA	-2	True	NA	NA	NA	100142944	100057571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_100057747_100058028_100059534_100059849_100060044_100072671_100072814_100083015_100083135_100084475_100084659_100086274_100086359_100088914_100089096_100095666_100095838_100097364_100097506_100098351_100098542_100102765_100102858_100103912_100103952_100108385_100108549_100142591
transcript_4850.known	chr1	+	4020	11	FSM	ENSG00000158008.10	ENST00000374280.4	4020	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.9	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCTTACAGCAGCTGCTC	26021690	True	NA	24	True	AATAAA	-38	NA	26021774	26036464	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26023426_26029192_26029287_26029599_26029708_26030475_26030596_26031131_26031265_26031459_26031567_26032395_26032486_26033228_26033316_26033695_26033857_26034835_26035005_26035164
transcript_48505.known	chr12	-	2023	13	FSM	ENSG00000111647.13	ENST00000356828.7	2023	13	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	33.2293168753136	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAATTTTATTCTA	-100139363	True	NA	NA	False	AATAAA	-21	NA	100142847	100069907	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_100070170_100072671_100072814_100083015_100083135_100084475_100084659_100086274_100086359_100088914_100089096_100095666_100095838_100097364_100097506_100098351_100098542_100102765_100102858_100103912_100103952_100108385_100108549_100142591
transcript_48514.known	chr12	+	1747	11	FSM	ENSG00000075089.10	ENST00000548180.5	1747	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	98.1396963516802	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGTGGGCAGAATATCT	100198242	True	NA	8	True	AATAAA	-16	NA	100200816	100224423	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_100200920_100204939_100205058_100205675_100205758_100207662_100207787_100210072_100210209_100210294_100210352_100212255_100212355_100212449_100212529_100218414_100218587_100220007_100220147_100223785
transcript_48516.known	chr12	+	1877	11	FSM	ENSG00000075089.10	ENST00000546902.5	1877	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	95.7843411002028	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTGGGCAGAATATCTT	100198241	True	NA	9	True	AATAAA	-17	NA	100200815	100224424	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_100201061_100204939_100205058_100205675_100205745_100207662_100207787_100210072_100210209_100210294_100210352_100212255_100212355_100212449_100212529_100218414_100218587_100220007_100220147_100223785
transcript_48519.known	chr12	-	3324	10	FSM	ENSG00000166153.17	ENST00000550587.6	3324	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	9.54521404218424	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATCAGTTTTATCTTTT	-100266479	True	NA	NA	False	AATAAA	-15	NA	100267079	100240061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_100241846_100242485_100242570_100248899_100248979_100252175_100252302_100252393_100252537_100253488_100253716_100256048_100256227_100262263_100262410_100263496_100263894_100266919
transcript_4853.known	chr1	-	3249	8	FSM	ENSG00000158014.15	ENST00000374276.4	3249	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1.39970842444753	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-26046101	True	NA	NA	False	NA	NA	NA	26046118	26037251	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_26039306_26039776_26039912_26041699_26041806_26042548_26042709_26043397_26043552_26044297_26044445_26044996_26045218_26045846
transcript_48530.known	chr12	-	1155	5	FSM	ENSG00000166153.17	ENST00000416321.5	1155	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	9.80752262296652	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTTTTGCAAGCCAAATC	-100266479	True	NA	NA	False	AATAAA	-28	NA	100267079	100252262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_100252537_100256048_100256227_100262263_100262410_100263496_100263894_100266919
transcript_48534.known	chr12	-	1033	4	FSM	ENSG00000166153.17	ENST00000551642.1	1033	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	4.98887651569859	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCACTGGAAATCAGAGTG	-100266455	True	NA	NA	False	AATAAA	-22	NA	100267055	100255872	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_100256227_100262263_100262410_100263496_100263894_100266919
transcript_48536.known	chr12	+	1659	11	FSM	ENSG00000075089.10	ENST00000552376.5	1659	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_9	93.2448389992712	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTGTGGGCAGAATAT	100198255	True	NA	6	True	AATAAA	-14	NA	100200829	100224421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_100200920_100204939_100205058_100205675_100205745_100207662_100207787_100210072_100210209_100210294_100210352_100212255_100212355_100212449_100212529_100218414_100218587_100220067_100220147_100223785
transcript_48537.known	chr12	+	3948	19	FSM	ENSG00000136021.19	ENST00000635101.1	3948	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	34.5092580170726	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGCAGTTGTATCTTCTG	100265135	True	NA	7	True	AATAAA	-18	NA	100267245	100340139	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_100267397_100282942_100283148_100291502_100291661_100298030_100298176_100311043_100311194_100312431_100312654_100313421_100313539_100314488_100314615_100315557_100315735_100317680_100317693_100317802_100317926_100323524_100323639_100326621_100326755_100329200_100329320_100334165_100334267_100335624_100335692_100335810_100335907_100337386_100337507_100338527
transcript_48544.known	chr12	+	5977	18	FSM	ENSG00000136021.19	ENST00000360820.7	5977	18	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_1	23.6640266896729	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCCATATTAAGTTGTGA	100265066	True	NA	14	True	AATAAA	-18	NA	100267176	100341715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_100267793_100282942_100283148_100291502_100291661_100298030_100298176_100311043_100311194_100312431_100312654_100313421_100313539_100314488_100314615_100315557_100315735_100317802_100317926_100323524_100323639_100326621_100326755_100329200_100329320_100334165_100334267_100335624_100335692_100335810_100335907_100337386_100337507_100338527
transcript_48546.known	chr12	+	2328	17	FSM	ENSG00000136021.19	ENST00000549687.5	2328	17	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	13.9764031048764	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAACAAAAATTAGCAAA	100265029	True	NA	NA	False	NA	NA	NA	100267139	100337404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_100267397_100282942_100283148_100291502_100291661_100298030_100298176_100311043_100311194_100312431_100312654_100313421_100313539_100314488_100314615_100315557_100315735_100317802_100317926_100323524_100323639_100326621_100326755_100329200_100329320_100334165_100334267_100335624_100335692_100335810_100335907_100337386
transcript_4855.known	chr1	+	4113	3	FSM	ENSG00000175087.10	ENST00000374269.2	4113	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCTGCTTTAGTGGCTC	26111339	True	NA	NA	False	AATAAA	-35	NA	26111823	26125555	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26111916_26114291_26114594_26121836
transcript_4856.known	chr1	+	2799	2	FSM	ENSG00000197245.6	ENST00000374268.5	2799	2	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCGGGCTGACTCTGGTC	26159048	False	NA	NA	False	AATAAA	-14	NA	26159078	26163962	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26159127_26161211
transcript_48560.nic	chr12	+	2431	11	NIC	ENSG00000139354.11	novel	5736	10	NA	NA	-1	0	combination_of_known_junctions	TRUE	canonical	3	17	junction_1	8.65794432876535	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAGAAAAGGAAGA	100572566	True	NA	NA	False	AATAAA	-15	NA	100573681	100624905	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_100573786_100591735_100591857_100592373_100592450_100594874_100594923_100600381_100600551_100601637_100601754_100611999_100612142_100617743_100617808_100618448_100618588_100622274_100622383_100623561
transcript_48564.known	chr12	+	2218	9	FSM	ENSG00000139354.11	ENST00000266754.9	2218	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	7.33037345569787	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACATACTCATTATAAAAA	100572567	True	NA	NA	False	AAGAAA	-13	NA	100573682	100624890	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_100573786_100594874_100594923_100600381_100600551_100601637_100601754_100611999_100612142_100617743_100617808_100618448_100618588_100622274_100622383_100623561
transcript_4857.known	chr1	+	638	3	FSM	ENSG00000142684.9	ENST00000374266.7	638	3	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_1	9	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCCTCCAACTCTAACTT	26166326	True	NA	19	True	AATAAA	-19	NA	26169907	26170873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26170184_26170417_26170481_26170574
transcript_48572.known	chr12	+	9031	62	FSM	ENSG00000120800.5	ENST00000261637.5	9031	62	0	0	0	0	multi-exon	TRUE	canonical	3	63	junction_10	30.3649042808639	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGTCTTCACTGTTTAA	101275841	True	NA	17	True	AATAAA	-18	NA	101280104	101386618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_101280328_101281115_101281197_101285569_101285637_101285748_101285882_101286320_101286510_101288959_101289042_101290136_101290275_101290732_101290889_101291741_101291889_101291969_101292105_101293167_101293246_101295479_101295659_101299681_101299838_101299972_101300062_101302447_101302554_101305914_101306066_101306698_101306762_101308184_101308344_101309762_101309840_101311718_101311799_101312035_101312277_101317477_101317664_101319544_101319636_101320851_101320938_101321503_101321630_101327080_101327248_101329240_101329450_101333300_101333445_101334424_101334505_101338050_101338278_101338812_101338958_101340522_101340611_101342445_101342590_101342786_101342838_101342940_101343094_101344594_101344751_101345553_101345695_101346450_101346589_101352054_101352195_101353046_101353130_101354831_101355119_101356553_101356694_101356925_101357083_101361961_101362061_101363575_101363744_101365458_101365626_101366557_101366700_101367859_101367977_101369720_101369892_101370431_101370564_101371057_101371169_101372883_101372964_101373400_101373471_101373584_101373768_101374807_101374940_101375623_101375757_101379370_101379559_101381139_101381212_101383040_101383314_101383542_101383670_101385582_101385729_101385967
transcript_48578.known	chr12	-	3197	6	FSM	ENSG00000120805.14	ENST00000261636.13	3197	6	0	0	0	0	multi-exon	FALSE	canonical	3	486	junction_5	32.5392071200268	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTTGTCCTTTCTGATC	-101397810	True	NA	-15	True	AATAAA	-42	NA	101407772	101393115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_101395671_101396398_101396578_101401061_101401174_101402864_101402947_101405843_101405982_101407641
transcript_4858.known	chr1	+	698	2	FSM	ENSG00000142684.9	ENST00000270812.6	698	2	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCCTCCAACTCTAACTT	26166360	True	NA	19	True	AATAAA	-19	NA	26169941	26170873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26170184_26170417
transcript_48583.known	chr12	-	1231	5	FSM	ENSG00000120805.14	ENST00000539055.5	1231	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	237.49157879807	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCACCTGCTAGCTTGTAA	-101397784	True	NA	NA	False	NA	NA	NA	101407746	101394917	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_101395671_101396398_101396578_101401061_101401174_101402864_101402947_101407641
transcript_48585.known	chr12	+	1572	9	FSM	ENSG00000111666.11	ENST00000229266.8	1572	9	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_8	16.6508258053467	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTATTTTTTCAATTTCA	101696163	True	NA	10	True	AATAAA	-22	NA	101697639	101729074	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_101698135_101714089_101714238_101714503_101714646_101716727_101716813_101720122_101720255_101723167_101723327_101723721_101723848_101726293_101726405_101728900
transcript_48586.nnic	chr12	+	1672	9	NIC	ENSG00000111666.11	novel	1572	9	NA	NA	-12	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	64.6817932265332	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATTAATCCTTATTTTT	101696151	True	NA	1	True	AATAAA	-13	NA	101697627	101729065	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_101698135_101714089_101714238_101714503_101714646_101716727_101716813_101720122_101720255_101723167_101723327_101723721_101723848_101726293_101726502_101728900
transcript_48587.known	chr12	+	2001	8	FSM	ENSG00000111666.11	ENST00000549872.5	2001	8	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_4	11.7924223334223	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACGAATCTTTATACTGA	101696195	True	NA	NA	False	AATAAA	-45	NA	101697671	101727039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_101698135_101714089_101714238_101714503_101714646_101716727_101716813_101720122_101720255_101723167_101723327_101723721_101723848_101726293
transcript_48590.known	chr12	-	5720	21	FSM	ENSG00000111670.16	ENST00000299314.12	5720	21	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_12	10.8640462075601	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTTGATTTTTAAATCTT	-101828867	True	NA	-15	True	CATAAA	-20	NA	101830959	101745498	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_101747242_101749100_101749192_101753371_101753540_101757211_101757311_101757571_101757658_101760029_101760144_101761126_101761347_101761563_101761764_101764201_101765305_101766090_101766295_101768036_101768161_101770020_101770192_101770405_101770586_101770995_101771158_101780151_101780287_101780556_101780622_101786011_101786218_101788547_101788590_101789937_101790058_101796676_101796763_101830558
transcript_48594.nnic	chr12	-	2750	13	NNC	ENSG00000111670.16	novel	5720	21	NA	NA	21	1398	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_12	24.5270542236301	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCACAGGGAAAGAAAAAGAG	-101828846	True	NA	NA	False	AAGAAA	-7	NA	101830938	101764362	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_101765305_101766090_101766295_101768036_101768161_101770020_101770192_101770405_101770586_101770995_101771158_101780151_101780287_101780556_101780622_101786011_101786218_101788547_101788590_101789937_101790058_101796676_101796763_101830625
transcript_48596.known	chr12	-	373	2	FSM	ENSG00000111670.16	ENST00000549165.1	373	2	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGGAAAAAAAAAC	-101828587	False	NA	NA	False	NA	NA	NA	101830679	101796510	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_101796763_101830558
transcript_48597.known	chr12	+	3279	7	FSM	ENSG00000136048.14	ENST00000258534.13	3279	7	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_5	6.86577664134866	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCCTGGTAATGTTGACTG	101877001	True	NA	4	True	AATAAA	-14	NA	101877579	101923612	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_101877921_101897862_101897931_101901290_101901434_101908185_101908364_101914173_101914233_101920108_101920202_101921215
transcript_48604.known	chr12	-	921	8	FSM	ENSG00000120860.11	ENST00000535501.5	921	8	0	0	0	0	multi-exon	TRUE	canonical	2	12	junction_6	60.7094115690576	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATGTCTTGTTGCTAAA	-102060684	True	NA	-2	True	AATAAA	-16	NA	102062034	102012943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_102013193_102025973_102026039_102039867_102039976_102044104_102044213_102046053_102046120_102050188_102050292_102061247_102061347_102061911
transcript_48605.known	chr12	-	865	7	FSM	ENSG00000120860.11	ENST00000545679.5	865	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	41.0365690573664	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTCTTGTTGCTAAAAT	-102060729	True	NA	0	True	AATAAA	-18	NA	102062079	102012941	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_102013193_102025973_102026039_102039867_102039976_102044104_102044213_102046053_102046120_102061247_102061347_102061911
transcript_48606.known	chr12	-	569	6	FSM	ENSG00000120860.11	ENST00000541569.5	569	6	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_3	16.2554606209729	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTATAATAAAAATATTTCA	-102060628	True	NA	NA	False	AATATA	-33	NA	102061978	102025920	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_102026039_102039867_102039979_102044104_102044213_102046053_102046120_102061247_102061347_102061911
transcript_48612.known	chr12	-	2362	10	FSM	ENSG00000075188.9	ENST00000552283.6	2362	10	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_9	44.1540513080462	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTATGTGTCTGTCACG	-102117251	True	NA	NA	False	AATAAA	-15	NA	102120114	102073102	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_102074468_102075000_102075095_102076796_102076848_102077321_102077504_102085765_102085857_102099105_102099201_102101031_102101105_102112107_102112233_102118362_102118584_102120049
transcript_48617.known	chr12	-	1203	9	FSM	ENSG00000075188.9	ENST00000251074.5	1203	9	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_6	33.7999630177312	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTATTTTTCTACTCT	-102115720	False	NA	-15	True	AATAAA	-15	NA	102118583	102074196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_102074468_102075000_102075095_102076796_102076848_102077321_102077504_102085765_102085857_102099105_102099201_102101031_102101105_102112107_102112233_102118362
transcript_48621.known	chr12	+	1916	11	FSM	ENSG00000185480.12	ENST00000392911.6	1916	11	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	72.7646205239882	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGTTTAAAAATACTAGT	102117175	True	NA	NA	False	NA	NA	NA	102120246	102196429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_102120287_102123885_102124042_102148234_102148464_102153868_102153977_102164437_102164609_102165728_102165884_102175482_102175667_102178591_102178771_102182548_102182628_102195311_102195448_102195950
transcript_48624.nic	chr12	+	2947	10	NIC	ENSG00000185480.12	novel	3076	11	NA	NA	-10	-3	intron_retention	FALSE	canonical	3	100	junction_9	60.7581727470104	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCTTTGAAACTTTATTT	102117101	True	NA	6	True	AATAAA	-20	NA	102120172	102197517	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_102120287_102123885_102124042_102148229_102148464_102153868_102153977_102164437_102164609_102165728_102165884_102175482_102175667_102178591_102178771_102182548_102182628_102195950
transcript_48630.nic	chr12	+	2723	9	NIC	ENSG00000185480.12	novel	3076	11	NA	NA	-10	0	intron_retention	FALSE	canonical	3	41	junction_6	85.6277371825275	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGAAACTTTATTTTCC	102117101	True	NA	9	True	AATAAA	-23	NA	102120172	102197520	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_102120287_102123885_102124042_102148229_102148464_102153868_102153977_102164437_102164609_102165728_102165884_102182548_102182628_102195311_102195448_102195950
transcript_48637.nic	chr12	+	2584	8	NIC	ENSG00000185480.12	novel	3076	11	NA	NA	-10	-3	intron_retention	FALSE	canonical	3	41	junction_6	84.4627680322725	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCTTTGAAACTTTATTT	102117101	True	NA	6	True	AATAAA	-20	NA	102120172	102197517	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_102120287_102123885_102124042_102148229_102148464_102153868_102153977_102164437_102164609_102165728_102165884_102182548_102182628_102195950
transcript_4864.known	chr1	+	2507	21	FSM	ENSG00000142675.18	ENST00000482227.5	2507	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	24.8311799961258	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGTCTACATGTAACTT	26176116	True	NA	11	True	AATAAA	-16	NA	26177511	26189882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26177600_26180452_26180611_26180714_26180897_26181856_26181942_26182360_26182403_26182484_26182585_26183196_26183257_26183345_26183415_26183728_26183831_26184070_26184142_26184213_26184288_26184400_26184508_26184584_26184613_26185013_26185187_26187167_26187242_26187410_26187483_26188233_26188308_26188441_26188504_26188597_26188698_26188771_26188954_26189278
transcript_48641.nic	chr12	+	2504	7	NIC	ENSG00000185480.12	novel	3076	11	NA	NA	-10	-4	intron_retention	FALSE	canonical	3	51	junction_6	78.6949101841338	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACCTTTGAAACTTTATT	102117101	True	NA	5	True	AATAAA	-19	NA	102120172	102197516	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_102120287_102123885_102124042_102148229_102148464_102153868_102153977_102164437_102164609_102165728_102165884_102195950
transcript_48648.known	chr12	+	835	5	FSM	ENSG00000185480.12	ENST00000392909.7	835	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	141.821190236156	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTCAGAACATTGAAGAAG	102117132	True	NA	NA	False	NA	NA	NA	102120203	102151823	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_102120287_102123885_102124042_102148229_102148464_102150263_102150372_102151569
transcript_48655.known	chr12	+	976	3	FSM	ENSG00000185480.12	ENST00000537257.5	976	3	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_2	21.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGTTTTGTCTACGTTA	102117173	True	NA	NA	False	ATTAAA	-20	NA	102120244	102149007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_102120287_102123885_102124042_102148229
transcript_48657.known	chr12	-	3759	13	FSM	ENSG00000171759.10	ENST00000553106.6	3759	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_12	2.32139804619735	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACCTTGACTTTATTTTC	-102916927	True	NA	NA	False	AATAAA	-21	NA	102917244	102836888	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_102839219_102840399_102840516_102843645_102843780_102844335_102844432_102846894_102846952_102851686_102851757_102852814_102852951_102855135_102855333_102866595_102866664_102877461_102877551_102894734_102894919_102912790_102912899_102917070
transcript_4866.known	chr1	+	2538	21	FSM	ENSG00000142675.18	ENST00000374253.9	2538	21	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_8	22.0337808829987	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTCTACATGTAACTTTA	26176113	True	NA	13	True	AATAAA	-18	NA	26177508	26189884	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26177600_26180452_26180611_26180714_26180897_26181856_26181942_26182360_26182403_26182479_26182585_26183196_26183257_26183345_26183436_26183728_26183831_26184070_26184142_26184213_26184288_26184400_26184508_26184584_26184613_26185013_26185187_26187167_26187242_26187410_26187483_26188233_26188308_26188441_26188504_26188597_26188698_26188771_26188954_26189278
transcript_48660.known	chr12	-	738	3	FSM	ENSG00000257681.1	ENST00000550029.1	738	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTACCGATGTCTGCCC	NA	False	NA	10	True	AATAAA	-31	NA	103768858	103763311	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_103763819_103766734_103766914_103768806
transcript_48667.known	chr12	-	7244	14	FSM	ENSG00000111696.12	ENST00000392876.8	7244	14	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	4.93987518707764	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTGGTTTATTGTCAGT	-103838995	True	NA	-17	True	AATAAA	-14	NA	103841234	103772309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_103778082_103780299_103780365_103785334_103785476_103787440_103787528_103788837_103788920_103793163_103793266_103793409_103793513_103793936_103793998_103796893_103797032_103798586_103798678_103806321_103806378_103806854_103806930_103814936_103815122_103840948
transcript_48669.known	chr12	+	2816	19	FSM	ENSG00000166598.16	ENST00000680370.1	2816	19	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	1704.0851750868	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCAGTGTCTTGACTG	103735993	True	NA	8	True	AATAAA	-11	NA	103930409	103947922	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_103930565_103931520_103931624_103931710_103931749_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943320_103943737_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
transcript_48683.known	chr12	+	2782	18	FSM	ENSG00000166598.16	ENST00000299767.10	2782	18	0	0	0	0	multi-exon	FALSE	canonical	3	3942	junction_7	668.623452923473	2125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGTCTTGACTGTCTT	103735993	True	NA	12	True	AATAAA	-15	NA	103930409	103947926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_103930565_103931520_103931624_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943320_103943737_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
transcript_48685.known	chr12	+	3184	18	FSM	ENSG00000166598.16	ENST00000680391.1	3184	18	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_13	1343.66753951541	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAGTGACTCAGGCTTA	103735934	True	NA	101	True	NA	NA	NA	103930350	103948015	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_103930565_103931520_103931624_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943574_103943737_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
transcript_48688.known	chr12	+	2570	18	FSM	ENSG00000166598.16	ENST00000681698.1	2570	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1362.97453816845	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCAGTGTCTTGACTG	103735996	True	NA	8	True	AATAAA	-11	NA	103930412	103947922	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_103930565_103931520_103931624_103932276_103932419_103932825_103932943_103934160_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943320_103943737_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
transcript_48691.known	chr12	+	2646	18	FSM	ENSG00000166598.16	ENST00000680316.1	2646	18	0	0	0	0	multi-exon	FALSE	canonical	2	78	junction_1	1347.6492489776	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCAGTGTCTTGACTG	103736183	False	NA	8	True	AATAAA	-11	NA	103930599	103947922	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_103930623_103931520_103931624_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943320_103943737_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
transcript_48693.known	chr12	+	2831	17	FSM	ENSG00000166598.16	ENST00000681861.1	2831	17	0	0	0	0	multi-exon	FALSE	canonical	3	3942	junction_7	635.806546713503	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGAATGTGAAATTTACAT	103930306	True	NA	NA	False	AAAAAG	-45	NA	103930331	103947695	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_103930565_103931520_103931624_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943320_103943737_103943875_103946617_103946697_103946785_103946942_103947310
transcript_48695.known	chr12	+	3248	17	FSM	ENSG00000166598.16	ENST00000680281.1	3248	17	0	0	0	0	multi-exon	FALSE	canonical	3	3942	junction_7	688.245221105821	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCAGTGTCTTGACTG	103735941	True	NA	8	True	AATAAA	-11	NA	103930357	103947922	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_103930565_103931520_103931624_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
transcript_48707.known	chr12	+	2858	16	FSM	ENSG00000166598.16	ENST00000680762.1	2858	16	0	0	0	0	multi-exon	FALSE	canonical	3	3942	junction_7	426.086657852602	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGATGAAGAAATGGATGT	103735941	True	NA	67	True	NA	NA	NA	103930357	103947379	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_103930565_103931520_103931624_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943320_103943737_103943875_103946617_103946697_103946785
transcript_4872.nic	chr1	+	2637	20	NIC	ENSG00000142675.18	novel	2535	21	NA	NA	-25	0	intron_retention	TRUE	canonical	3	78	junction_8	12.1454709819735	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGTCTACATGTAACTT	26176063	True	NA	11	True	AATAAA	-16	NA	26177458	26189882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_26177600_26180452_26180611_26180714_26180897_26181856_26181942_26182360_26182403_26182479_26182585_26183196_26183257_26183345_26183415_26183728_26183831_26184070_26184288_26184400_26184508_26184584_26184613_26185013_26185187_26187167_26187242_26187410_26187483_26188233_26188308_26188441_26188504_26188597_26188698_26188771_26188954_26189278
transcript_48730.known	chr12	+	1204	7	FSM	ENSG00000166598.16	ENST00000640977.2	1204	7	0	0	0	0	multi-exon	FALSE	canonical	3	4137	junction_3	260.310551713397	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGATTTGAAGTCAGCT	103735946	True	NA	NA	False	NA	NA	NA	103930362	103938535	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_103930565_103931520_103931624_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339
transcript_48733.nic	chr12	+	1030	6	ISM	ENSG00000166598.16	ENST00000640977.2	1204	7	-67	774	-36	-774	5prime_fragment	FALSE	canonical	3	4137	junction_3	280.522797647535	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCACAGTTCATAAACTT	103930255	True	NA	NA	False	ATTAAA	-16	NA	103930295	103937761	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_103930565_103931520_103931624_103932276_103932419_103932825_103932943_103933955_103934288_103937694
transcript_48738.known	chr12	+	3128	5	FSM	ENSG00000166598.16	ENST00000540297.7	3128	5	0	0	0	0	multi-exon	FALSE	canonical	3	4137	junction_3	306.546387191237	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTAGTCCCAGCTACTC	103735946	True	NA	NA	False	AATAAA	-33	NA	103930362	103936519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_103930565_103931520_103931624_103932276_103932419_103932825_103932943_103933955
transcript_48741.known	chr12	-	620	5	FSM	ENSG00000204954.10	ENST00000549960.5	620	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	42.7492689995981	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGGATGTTTAGCCGA	-103955039	True	NA	64	True	NA	NA	NA	103957134	103951409	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_103951631_103953413_103953535_103954874_103954969_103956630_103956749_103957068
transcript_48746.known	chr12	-	1243	4	FSM	ENSG00000204954.10	ENST00000547975.5	1243	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	17.326921891156	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCATCTTTATTTCATTAA	-103955086	True	NA	0	True	ATTAAA	-25	NA	103957181	103950739	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_103951631_103953413_103953535_103956630_103956749_103957068
transcript_48750.known	chr12	-	1702	3	FSM	ENSG00000204954.10	ENST00000378090.9	1702	3	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	7.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTTTTTTAACTTAAAA	-103955120	True	NA	NA	False	ATTAAA	-31	NA	103957215	103950193	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_103951631_103956630_103956749_103957068
transcript_48751.known	chr12	-	685	3	FSM	ENSG00000204954.10	ENST00000552940.1	685	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	15	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGGGACTGAAAGAAAGAA	-103955052	True	NA	-110	True	NA	NA	NA	103957147	103951583	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_103951631_103953413_103953535_103956630
transcript_48759.known	chr12	-	1446	2	FSM	ENSG00000204954.10	ENST00000549478.1	1446	2	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCCATCTTTATTTC	-103955095	True	NA	-5	True	ATTAAA	-20	NA	103957190	103950744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_103951631_103956630
transcript_48767.known	chr12	+	1602	11	FSM	ENSG00000139372.15	ENST00000266775.13	1602	11	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	117.640809245772	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGGTGTAATTGTAATG	103957473	True	NA	NA	False	NA	NA	NA	103965844	103987192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_103966061_103972959_103973034_103976917_103977061_103979830_103980073_103980892_103980963_103982798_103982935_103983135_103983219_103983294_103983390_103984748_103984921_103985602_103985729_103986947
transcript_48771.known	chr12	+	3183	10	FSM	ENSG00000139372.15	ENST00000392872.8	3183	10	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_6	41.2579958580421	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACGGGCTTTTTCTATAG	103957500	True	NA	11	True	AATAAA	-26	NA	103965871	103988874	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_103966061_103976917_103977061_103979830_103980073_103980892_103980963_103982798_103982935_103983135_103983219_103983294_103983390_103984748_103984921_103985602_103985729_103986947
transcript_48776.known	chr12	+	1387	9	FSM	ENSG00000139372.15	ENST00000544861.5	1387	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	123.142638330515	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGTGTAATTGTAATGTA	103957473	True	NA	NA	False	NA	NA	NA	103965844	103987194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_103966061_103979830_103980073_103980892_103980963_103982798_103982935_103983135_103983219_103983294_103983390_103984748_103984921_103985602_103985729_103986947
transcript_48778.nic	chr12	+	584	4	ISM	ENSG00000139372.15	ENST00000266775.13	1602	11	-25	7236	-2	-517	5prime_fragment	FALSE	canonical	3	63	junction_1	151.447093805798	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACAGACACATTTAAAGTA	103957448	True	NA	NA	False	AAGAAA	-13	NA	103965819	103979956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_103966061_103972959_103973034_103976917_103977061_103979830
transcript_48779.known	chr12	+	1139	3	FSM	ENSG00000139372.15	ENST00000544060.1	1139	3	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_1	53.5	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTAAAATAACAGCAAA	103957531	True	NA	NA	False	CATAAA	-14	NA	103965902	103980668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_103966061_103976917_103977061_103979830
transcript_48781.nic	chr12	+	400	2	ISM	ENSG00000139372.15	ENST00000544060.1	1139	3	-99	3608	-18	-3413	5prime_fragment	FALSE	canonical	3	297	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTTTCACCATGAGAGCT	103957432	True	NA	NA	False	NA	NA	NA	103965803	103977060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_103966061_103976917
transcript_48782.known	chr12	+	862	2	FSM	ENSG00000139372.15	ENST00000545698.1	862	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGTAACTGTAAGAAACAT	103957470	True	NA	NA	False	NA	NA	NA	103965841	103980473	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_103966061_103979830
transcript_48783.nic	chr12	-	1789	10	ISM	ENSG00000120820.13	ENST00000548660.5	1835	11	13999	-293	3	0	3prime_fragment	FALSE	canonical	3	22	junction_9	19.5049851177704	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTTATCATGTTACTA	-104050173	True	NA	-16	True	AATAAA	-17	NA	104050184	103988986	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_103989578_103993391_103993505_103994334_103994502_103996734_103996848_103997450_103997536_103999396_103999515_104003134_104003307_104015012_104015106_104019629_104019677_104049894
transcript_48784.known	chr12	-	1835	11	FSM	ENSG00000120820.13	ENST00000548660.5	1835	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	27.6904315603784	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTGTGCAAATTATACCT	-104064145	False	NA	-28	True	TATAAA	-12	NA	104064183	103989279	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_103989578_103993391_103993505_103994334_103994502_103996734_103996848_103997450_103997536_103999396_103999515_104003134_104003307_104015012_104015106_104019629_104019677_104049894_104050289_104063948
transcript_48789.known	chr12	-	1927	11	FSM	ENSG00000120820.13	ENST00000360814.9	1927	11	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_7	11.1575086824972	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTTATCATGTTACTA	-104050176	False	NA	-16	True	AATAAA	-17	NA	104050187	103988986	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_103989578_103993391_103993505_103994334_103994502_103996734_103996848_103997450_103997536_103999396_103999515_104003134_104003307_104015012_104015106_104019629_104019677_104021356_104021492_104049894
transcript_48792.known	chr12	+	5660	15	FSM	ENSG00000111727.12	ENST00000229330.9	5660	15	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_12	3.41141541035987	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGGTGTTATTTATTTT	104064269	True	NA	NA	False	AATAAA	-23	NA	104064530	104106524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_104064724_104066166_104066316_104067946_104068108_104079444_104079654_104080745_104080831_104082499_104082607_104082712_104082902_104086846_104087015_104087985_104088039_104093385_104093564_104095359_104095564_104096359_104096434_104098342_104098481_104101967_104102154_104102958
transcript_48794.known	chr12	-	3508	9	FSM	ENSG00000120837.8	ENST00000551446.6	3508	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	231.478096965998	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGTTAACCTATCATAAAAA	-104133610	True	NA	-38	True	NA	NA	NA	104138241	104117117	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_104119770_104120399_104120480_104121239_104121322_104123225_104123424_104126113_104126245_104128423_104128518_104131753_104131839_104135447_104135533_104138140
transcript_48798.known	chr12	-	3424	8	FSM	ENSG00000120837.8	ENST00000240055.8	3424	8	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_7	68.0009003541835	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTAAACATTGCTTTCT	-104133579	True	NA	-6	True	CATAAA	-15	NA	104138210	104117085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_104119770_104120399_104120480_104121239_104121322_104123225_104123424_104126113_104126245_104128423_104128518_104135447_104135533_104138140
transcript_48813.known	chr12	+	3930	15	FSM	ENSG00000198431.17	ENST00000503506.6	3930	15	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	75.2896786703577	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATATCCACGTGTGCCT	NA	False	NA	4	True	ATTAAA	-14	NA	104286681	104350277	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_104287110_104288930_104289041_104311289_104311413_104313244_104313318_104315776_104315897_104318912_104319056_104319469_104319586_104321090_104321317_104325336_104325430_104326346_104326424_104327514_104327672_104331533_104331642_104334236_104334333_104339138_104339274_104348352
transcript_48814.known	chr12	+	3974	15	FSM	ENSG00000198431.17	ENST00000526691.5	3974	15	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	121.159786552928	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCACGTGTGCCTTCTTAC	NA	False	NA	10	True	ATTAAA	-20	NA	104286880	104350283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_104287347_104288930_104289041_104311289_104311413_104313244_104313318_104315776_104315897_104318912_104319056_104319469_104319586_104321090_104321317_104325336_104325430_104326346_104326424_104327514_104327672_104331533_104331642_104334236_104334333_104339138_104339274_104348352
transcript_48816.known	chr12	+	2018	14	FSM	ENSG00000198431.17	ENST00000529546.5	2018	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	142.146270194393	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACGTTAGCAGTTGATT	104282479	True	NA	NA	False	NA	NA	NA	104287021	104348828	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_104287110_104288930_104289041_104313244_104313318_104315776_104315897_104318912_104319056_104319469_104319586_104321090_104321317_104325336_104325430_104326346_104326424_104327514_104327672_104331533_104331642_104334236_104334333_104339138_104339274_104348352
transcript_48817.nic	chr12	+	3571	14	NIC	ENSG00000198431.17	novel	3974	15	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	93	junction_1	107.119741659763	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCACGTGTGCCTTCTTAC	104282394	True	NA	10	True	ATTAAA	-20	NA	104286936	104350283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_104287110_104311289_104311413_104313244_104313318_104315776_104315897_104318912_104319056_104319469_104319586_104321090_104321317_104325336_104325430_104326346_104326424_104327514_104327672_104331533_104331642_104334236_104334333_104339138_104339274_104348352
transcript_48818.nic	chr12	+	3760	14	NIC	ENSG00000198431.17	novel	3974	15	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	124.640785635309	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCACGTGTGCCTTCTTAC	104282442	True	NA	10	True	ATTAAA	-20	NA	104286984	104350283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_104287347_104311289_104311413_104313244_104313318_104315776_104315897_104318912_104319056_104319469_104319586_104321090_104321317_104325336_104325430_104326346_104326424_104327514_104327672_104331533_104331642_104334236_104334333_104339138_104339274_104348352
transcript_48826.known	chr12	+	400	5	FSM	ENSG00000198431.17	ENST00000526580.5	400	5	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	160.334805953043	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACAGAATCACATTGGCT	104282514	True	NA	NA	False	NA	NA	NA	104287056	104318943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_104287110_104311289_104311413_104313244_104313318_104315776_104315897_104318912
transcript_48827.known	chr12	+	4082	15	NNC	ENSG00000198431.17	novel	3974	15	NA	NA	0	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_14	165.92992435338	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATGGTCTTGGGAGTCT	NA	False	NA	32	True	ATTAAA	-42	NA	104286681	104350305	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_104287347_104311289_104311413_104313244_104313318_104315776_104315897_104318912_104319056_104319469_104319586_104321090_104321317_104325336_104325430_104326346_104326424_104327514_104327672_104331533_104331642_104334236_104334333_104339138_104339274_104348352_104348413_104348415
transcript_48828.known	chr12	+	528	1	FSM	ENSG00000213442.5	ENST00000462885.1	528	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	866	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGCAGGGCCCTCGTCC	104265212	False	NA	NA	False	NA	NA	NA	104265308	104265836	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_104265300_104265800
transcript_48829.known	chr12	+	1467	1	FSM	ENSG00000255150.2	ENST00000527879.2	1467	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGGGATATTTGATAATT	104303563	True	NA	11	True	AATAAA	-21	NA	104303738	104305205	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_104303700_104305200
transcript_48830.known	chr12	+	5696	3	FSM	ENSG00000171310.11	ENST00000549260.5	5696	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	19	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTTCTGTGTATGGTT	104454541	True	NA	8	True	ATTAAA	-16	NA	104456970	104762014	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_104457515_104601905_104601992_104756948
transcript_48831.known	chr12	+	5734	3	FSM	ENSG00000171310.11	ENST00000303694.6	5734	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	18.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTTCTGTGTATGGTT	104454518	True	NA	8	True	ATTAAA	-16	NA	104456947	104762014	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_104457530_104601905_104601992_104756948
transcript_48832.known	chr12	+	756	2	FSM	ENSG00000171310.11	ENST00000546689.1	756	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGCATCTCTGAAAAATC	104454571	True	NA	NA	False	NA	NA	NA	104457000	104602147	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_104457515_104601905
transcript_48833.known	chr12	+	936	2	FSM	ENSG00000171310.11	ENST00000547956.1	936	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGGAATTAAAGGTCCACCG	104454538	True	NA	NA	False	NA	NA	NA	104456967	104602279	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_104457530_104601905
transcript_48835.known	chr12	+	3623	33	FSM	ENSG00000136051.15	ENST00000620430.5	3623	33	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_14	46.073607887271	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACTATTGATGAATTGTT	105101497	True	NA	NA	False	NA	NA	NA	105107771	105167000	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_105107862_105111124_105111265_105114215_105114270_105114361_105114428_105115183_105115230_105115660_105115729_105118445_105118529_105120554_105120598_105121100_105121205_105122117_105122239_105126003_105126128_105126234_105126363_105127128_105127290_105133769_105133900_105137885_105138012_105140293_105140402_105140898_105141046_105141166_105141247_105142452_105142559_105143126_105143244_105144286_105144456_105144717_105144873_105146451_105146527_105147041_105147147_105149614_105149750_105152342_105152452_105156725_105156793_105157235_105157323_105160000_105160149_105162748_105162846_105164110_105164308_105164640_105164741_105166863
transcript_48836.nic	chr12	+	3533	32	ISM	ENSG00000136051.15	ENST00000332180.10	5791	33	-19	4400	-2	1	5prime_fragment	FALSE	canonical	3	178	junction_28	23.8959328912034	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGGAAGGTCAGTGAGT	105101437	True	NA	NA	False	AAGAAA	-15	NA	105107711	105164730	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_105107862_105111124_105111265_105114215_105114270_105114361_105114428_105115183_105115230_105115660_105115729_105118445_105118529_105120554_105120598_105121100_105121205_105122117_105122239_105126003_105126128_105126234_105126363_105127128_105127290_105133769_105133897_105137885_105138012_105140293_105140402_105140898_105141046_105141166_105141247_105142452_105142559_105143126_105143244_105144286_105144456_105144717_105144873_105146451_105146527_105147041_105147147_105149614_105149750_105152342_105152452_105156725_105156793_105157235_105157323_105160000_105160149_105162748_105162846_105164110_105164308_105164640
transcript_48841.nic	chr12	+	3203	30	ISM	ENSG00000136051.15	ENST00000332180.10	5791	33	-19	6328	-2	0	5prime_fragment	TRUE	canonical	3	178	junction_28	23.4077743521016	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAATTGGAGCTGCCTT	105101437	True	NA	NA	False	AATAAA	-4	NA	105107711	105162802	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_105107862_105111124_105111265_105114215_105114270_105114361_105114428_105115183_105115230_105115660_105115729_105118445_105118529_105120554_105120598_105121100_105121205_105122117_105122239_105126003_105126128_105126234_105126363_105127128_105127290_105133769_105133897_105137885_105138012_105140293_105140402_105140898_105141046_105141166_105141247_105142452_105142559_105143126_105143244_105144286_105144456_105144717_105144873_105146451_105146527_105147041_105147147_105149614_105149750_105152342_105152452_105156725_105156793_105157235_105157323_105160000_105160149_105162748
transcript_48853.known	chr12	+	23524	4	FSM	ENSG00000151131.11	ENST00000552951.7	23524	4	0	0	0	0	multi-exon	FALSE	canonical	3	1072	junction_3	55.659680200303	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTTTCCTTCTCTTTA	104974643	True	NA	5	True	AATAAA	-16	NA	104986315	105017625	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_104986468_104988166_104988254_104991711_104991849_104994477
transcript_48854.known	chr12	+	459	3	FSM	ENSG00000151131.11	ENST00000280749.5	459	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	594.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTGACATATGTCTGCAA	104974666	True	NA	16	True	AATAAA	-16	NA	104986338	104994720	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_104986468_104988166_104988254_104994477
transcript_48856.known	chr12	+	291	6	FSM	ENSG00000235162.9	ENST00000549934.2	291	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	229.527688961485	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCACAGACATTTCCAAGG	105330851	False	NA	NA	False	NA	NA	NA	105330867	105370680	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_105330938_105348601_105348627_105365806_105365843_105366616_105366697_105367476_105367510_105370633
transcript_48860.known	chr12	+	1329	5	FSM	ENSG00000235162.9	ENST00000612117.4	1329	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	247.734232596143	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTACATTTCTTAATTATT	105325852	True	NA	11	True	ATTAAA	-19	NA	105330635	105371517	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_105330938_105348601_105348627_105366616_105366697_105367471_105367510_105370633
transcript_48871.known	chr12	-	2190	21	FSM	ENSG00000136044.12	ENST00000551662.5	2190	21	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_15	36.5407649071554	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCGTTTGTGGAATGTAAT	-105234739	True	NA	NA	False	NA	NA	NA	105236083	105174207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_105174449_105176034_105176083_105176875_105177017_105177225_105177263_105188272_105188448_105189771_105189825_105189990_105190156_105195260_105195350_105195444_105195502_105195584_105195628_105197764_105197954_105199372_105199532_105203702_105203786_105207060_105207208_105207970_105208048_105208157_105208200_105211229_105211318_105217068_105217141_105217665_105217726_105229124_105229224_105235958
transcript_48880.nnic	chr12	-	3089	20	NIC	ENSG00000136044.12	novel	3171	21	NA	NA	-48	0	combination_of_known_splicesites	FALSE	canonical	2	15	junction_11	33.7066537074674	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGTTAGATGTGGTTATT	NA	False	NA	-4	True	AATAAA	-31	NA	105236251	105173299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_105174449_105176034_105176083_105176875_105177017_105177225_105177263_105188272_105188448_105189771_105189825_105189990_105190156_105195260_105195350_105195444_105195502_105195584_105195628_105197764_105197954_105203702_105203786_105207060_105207208_105207970_105208030_105208157_105208200_105211229_105211318_105217068_105217141_105217665_105217726_105229124_105229224_105235958
transcript_48883.nnic	chr12	-	3107	20	NIC	ENSG00000136044.12	novel	3171	21	NA	NA	-48	0	combination_of_known_splicesites	FALSE	canonical	2	16	junction_2	33.6739293520305	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGTTAGATGTGGTTATT	NA	False	NA	-4	True	AATAAA	-31	NA	105236251	105173299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_105174449_105176034_105176083_105177225_105177263_105188272_105188448_105189771_105189825_105189990_105190156_105195260_105195350_105195444_105195502_105195584_105195628_105197764_105197954_105199372_105199532_105203702_105203786_105207060_105207208_105207970_105208030_105208157_105208200_105211229_105211318_105217068_105217141_105217665_105217726_105229124_105229224_105235958
transcript_48893.known	chr12	-	5744	7	FSM	ENSG00000074590.14	ENST00000261402.7	5744	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	2.81365716935569	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGACCTTGCTTCTTTA	-106138942	False	484	-6	True	AATAAA	-16	NA	106138954	106063344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_106067956_106070773_106070907_106072723_106072844_106083863_106083930_106086733_106086886_106106404_106106526_106138413
transcript_48898.known	chr12	+	2277	10	FSM	ENSG00000166046.11	ENST00000299045.8	2277	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	4.21051007144365	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTATTTGAAATGTACAAT	106302216	True	NA	NA	False	AATAAA	-20	NA	106302732	106347003	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_106302942_106311040_106311233_106314357_106314494_106318343_106318465_106321485_106321707_106323509_106323647_106335638_106335827_106336031_106336214_106340825_106340999_106346285
transcript_4890.known	chr1	+	624	3	FSM	ENSG00000142675.18	ENST00000465415.1	624	3	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	7.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTGGCCAACATGGTGAA	26176107	True	NA	NA	False	NA	NA	NA	26177502	26181083	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26177600_26180452_26180611_26180714
transcript_48901.known	chr12	+	1788	7	FSM	ENSG00000166046.11	ENST00000547153.5	1788	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	4.57347424467075	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCCCCAGTAGAGAATTAC	106302286	True	NA	NA	False	AATAAA	-23	NA	106302802	106330171	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_106302942_106311040_106311233_106314357_106314494_106318343_106318465_106321485_106321707_106323509_106323647_106329329
transcript_48915.nnic	chr12	-	3107	3	NNC	ENSG00000136026.14	novel	3121	2	NA	NA	-274	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	264	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCCAGAGTGGTTACAT	-106248271	False	NA	-26	True	AATAAA	-20	NA	106248294	106237880	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_106240350_106247368_106247571_106247858
transcript_4892.nnic	chr1	+	1005	3	FSM	ENSG00000236155.7	ENST00000692018.1	935	3	-74	4	-74	0	multi-exon	FALSE	canonical	3	31	junction_1	7	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACATTTTGTTGTCTTTA	NA	False	NA	NA	False	AATAAA	-44	NA	26225240	26229840	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26225704_26227793_26227997_26229501
transcript_48931.nnic	chr12	-	3214	3	NNC	ENSG00000136026.14	novel	3121	2	NA	NA	-493	-112	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	264	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCCGAAAAGTAAAAAAAAAA	-106248490	True	NA	NA	False	NA	NA	NA	106248513	106237992	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_106240350_106247368_106247571_106247858
transcript_48933.nnic	chr12	-	2981	3	NNC	ENSG00000136026.14	novel	3121	2	NA	NA	-135	-112	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	264	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCCGAAAAGTAAAAAAAAAA	-106246946	True	NA	NA	False	NA	NA	NA	106248155	106237992	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_106240350_106247368_106247575_106247737
transcript_48936.nnic	chr12	-	2742	3	NNC	ENSG00000136026.14	novel	3121	2	NA	NA	-127	-112	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	264	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCCGAAAAGTAAAAAAAAAA	-106246938	True	NA	NA	False	NA	NA	NA	106248147	106237992	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_106240350_106247368_106247578_106247971
transcript_48937.nnic	chr12	-	3103	3	NNC	ENSG00000136026.14	novel	3121	2	NA	NA	-162	-112	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	264	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCCGAAAAGTAAAAAAAAAA	-106248159	False	NA	NA	False	NA	NA	NA	106248182	106237992	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_106240350_106247368_106247579_106247646
transcript_48943.known	chr12	-	3121	2	FSM	ENSG00000136026.14	ENST00000378026.5	3121	2	0	0	0	0	multi-exon	FALSE	canonical	3	528	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCCAGAGTGGTTACAT	-106243816	True	NA	-26	True	AATAAA	-20	NA	106248020	106237880	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_106240350_106247368
transcript_48945.known	chr12	+	4183	28	FSM	ENSG00000013503.10	ENST00000228347.9	4183	28	0	0	0	0	multi-exon	TRUE	canonical	3	57	junction_15	9.92938027233284	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGTGGCTGCTTTGTCAT	106356040	True	NA	8	True	NA	NA	NA	106357747	106510198	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_106357952_106363869_106363903_106366515_106366573_106366657_106366723_106369274_106369351_106369582_106369684_106376358_106376451_106378266_106378385_106380030_106380140_106393030_106393154_106405856_106405977_106410825_106410961_106427196_106427359_106430272_106430474_106432317_106432481_106433718_106433873_106437056_106437132_106437680_106437780_106444462_106444591_106454501_106454712_106457137_106457297_106459250_106459369_106463477_106463621_106496054_106496159_106496751_106496919_106501322_106501437_106504080_106504255_106509419
transcript_48950.known	chr12	+	3389	13	FSM	ENSG00000111785.21	ENST00000462949.5	3389	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	70.4928581882984	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTGTGTGTTTCTTTA	106771697	True	NA	22	True	AATAAA	-25	NA	106774713	106887290	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_106774830_106783996_106784045_106814695_106815305_106825725_106825821_106842588_106842818_106843851_106843948_106851449_106851595_106860267_106860413_106870822_106870943_106874480_106874568_106878986_106879126_106879774_106879948_106885903
transcript_48955.known	chr12	+	5048	10	FSM	ENSG00000111785.21	ENST00000392837.9	5048	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_9	51.7987558838155	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTATATGATATTCCATT	106771665	True	NA	5	True	AATAAA	-18	NA	106774681	106889316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_106774830_106783996_106784045_106814695_106815305_106825725_106825821_106842588_106842818_106843851_106843948_106851449_106851595_106860267_106860413_106870822_106870943_106885903
transcript_48956.known	chr12	+	2134	9	FSM	ENSG00000111785.21	ENST00000470628.2	2134	9	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_8	40.2692112537606	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCCCTTCCCCTCTTGCT	106771729	False	NA	NA	False	NA	NA	NA	106774745	106871505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_106774830_106783996_106784045_106814695_106815305_106825725_106825821_106842588_106842818_106843851_106843948_106851449_106851595_106860267_106860413_106870822
transcript_48958.known	chr12	+	2440	9	FSM	ENSG00000111785.21	ENST00000392839.6	2440	9	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_8	29.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGGAACACACACATCCTC	106771623	True	NA	NA	False	NA	NA	NA	106774639	106886786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_106774830_106783996_106784045_106814695_106815305_106825725_106825821_106842588_106842818_106843851_106843948_106851449_106851595_106860267_106860413_106885903
transcript_48966.nic	chr12	+	2930	8	NIC	ENSG00000111785.21	novel	3207	12	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	49.8421999711006	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCCATCTGTGTGTGTT	106771583	True	NA	16	True	AATAAA	-19	NA	106774599	106887284	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_106774830_106814695_106815305_106825725_106825821_106842588_106842818_106843851_106843948_106851449_106851595_106860267_106860413_106885903
transcript_48970.nic	chr12	+	1124	3	ISM	ENSG00000111785.21	ENST00000470628.2	2134	9	-125	55943	0	596	5prime_fragment	FALSE	canonical	3	169	junction_2	11	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATTCTCTCTTTTTAAGA	106771604	True	NA	NA	False	AATATA	-15	NA	106774620	106815562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_106774830_106783996_106784045_106814695
transcript_48971.known	chr12	-	1469	1	FSM	ENSG00000260329.1	ENST00000570282.1	1469	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTTGAATCTGTTTCATA	-106955433	True	NA	NA	False	ATTAAA	-18	NA	106955497	106954028	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_106954000_106955500
transcript_48973.known	chr12	+	925	5	FSM	ENSG00000151135.10	ENST00000550344.5	925	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	39.679969758053	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATACTTAAGTTCCAGGTT	106954642	True	NA	NA	False	AAAAAG	-36	NA	106955866	106971576	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_106956066_106957081_106957150_106959269_106959386_106967110_106967181_106971104
transcript_48974.known	chr12	+	811	5	FSM	ENSG00000151135.10	ENST00000547242.5	811	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	37.0573879273756	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGCTAAATTATGGACTA	106954603	True	NA	NA	False	AATATA	-45	NA	106955827	106971441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_106956066_106957081_106957150_106959287_106959386_106967110_106967181_106971104
transcript_48976.known	chr12	+	3228	4	FSM	ENSG00000151135.10	ENST00000280756.9	3228	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	15.1730755689881	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGATCTTACCATTTTTAG	106954682	True	NA	8	True	AATAAA	-17	NA	106955906	106974035	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_106956066_106957081_106957150_106967110_106967181_106971104
transcript_48980.known	chr12	+	3349	3	FSM	ENSG00000151135.10	ENST00000548125.5	3349	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	29.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATCTTACCATTTTTAGT	106955673	False	NA	9	True	AATAAA	-18	NA	106955718	106974036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_106956066_106967110_106967181_106971104
transcript_48983.known	chr12	-	1763	3	FSM	ENSG00000120832.10	ENST00000392830.6	1763	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	25.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTATAAGTGAATCACTT	-106986207	True	NA	NA	False	ATTAAA	-18	NA	106987149	106977290	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_106978772_106985114_106985216_106986968
transcript_48984.known	chr12	-	418	3	FSM	ENSG00000120832.10	ENST00000550496.1	418	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	25.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTATACAACTGATAAACAG	-106986180	True	NA	NA	False	AATACA	-22	NA	106987122	106978614	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_106978768_106985114_106985226_106986968
transcript_48988.known	chr12	-	3235	2	FSM	ENSG00000120832.10	ENST00000552029.1	3235	2	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTGTTGCTTCTTTCTAG	-106986184	True	NA	-1	True	ATTAAA	-22	NA	106987126	106977548	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_106978772_106985114
transcript_48989.known	chr12	-	2987	13	FSM	ENSG00000008405.12	ENST00000008527.10	2987	13	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_11	22.0031563392366	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGTACGTGTTTTTTT	-107089862	True	NA	0	True	ATTAAA	-19	NA	107093549	106991363	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_106992002_106992786_106992891_106992964_106993037_106997293_106997387_106997487_106997691_106997914_106998067_106999550_106999863_106999941_107000083_107001279_107001369_107001763_107001949_107005105_107005249_107022083_107022193_107092803
transcript_48993.known	chr12	+	811	7	FSM	ENSG00000151136.15	ENST00000494235.2	811	7	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_1	18.3938395484285	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGCCTAGTGCAGGGAATG	107634773	False	NA	NA	False	NA	NA	NA	107634831	107657718	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_107634959_107635284_107635391_107640310_107640414_107642089_107642172_107649205_107649275_107651673_107651788_107657508
transcript_48995.nic	chr12	+	2700	6	ISM	ENSG00000151136.15	ENST00000494235.2	811	7	361	-1924	361	0	3prime_fragment	FALSE	canonical	3	54	junction_2	4.69041575982343	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCATCGTGTGTGTGGTT	107635134	False	NA	14	True	ATTAAA	-20	NA	107635192	107659642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_107635391_107640310_107640414_107642089_107642172_107649205_107649275_107651673_107651788_107657508
transcript_48996.known	chr12	+	2549	15	FSM	ENSG00000136045.12	ENST00000412830.8	2549	15	0	0	0	0	multi-exon	TRUE	canonical	3	655	junction_11	59.6970668954377	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTATTCTGTTTCTTTGTT	107677430	True	NA	9	True	ATTAAA	-15	NA	107685798	107713162	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_107685972_107688447_107688507_107688614_107688803_107692813_107692900_107692999_107693097_107696473_107696585_107697466_107697598_107699372_107699435_107702934_107703032_107703684_107703747_107704635_107704748_107708925_107709017_107709110_107709233_107710404_107710511_107712110
transcript_49.known	ERCC-00136	+	1025	1	FSM	ERCC-00136A	EF011063	1025	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1407	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1025	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00136_+_0_1000
transcript_49005.nic	chr12	+	865	7	ISM	ENSG00000136045.12	ENST00000412830.8	2549	15	-33	15578	-33	0	5prime_fragment	FALSE	canonical	3	730	junction_5	65.3018631689275	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGGAAAGAAGGTAAAGA	107677397	True	NA	NA	False	AGTAAA	-21	NA	107685765	107697584	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_107685972_107688447_107688507_107688614_107688803_107692813_107692900_107692999_107693097_107696473_107696585_107697466
transcript_49010.known	chr12	-	4182	12	FSM	ENSG00000110851.12	ENST00000228437.10	4182	12	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_7	11.5365033303384	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGATTCCTCTGGTAGTCT	-107760531	True	NA	NA	False	ATTAAA	-20	NA	107761137	107732870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_107734523_107739382_107739552_107740945_107741261_107742220_107742349_107743196_107743283_107744542_107744662_107746274_107746425_107751414_107752210_107753923_107754110_107756831_107756966_107760504_107760772_107760956
transcript_49034.known	chr12	-	5488	4	FSM	ENSG00000174600.14	ENST00000550402.6	5488	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.24721912892465	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTGTGGCTCAGTTCTG	-108339260	True	NA	NA	False	AATAAA	-14	NA	108339311	108288045	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_108292960_108293588_108293665_108329994_108330208_108339026
transcript_49036.known	chr12	-	632	3	FSM	ENSG00000174600.14	ENST00000550573.5	632	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAACCACCGCAGCGTTCG	-108320599	True	NA	NA	False	NA	NA	NA	108320662	108292521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_108292960_108293588_108293665_108320544
transcript_49038.known	chr12	-	5283	3	FSM	ENSG00000174600.14	ENST00000312143.11	5283	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGGCTCAGTTCTGGG	-108339266	True	NA	NA	False	AATAAA	-16	NA	108339317	108288043	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_108292960_108293588_108293665_108339026
transcript_49041.known	chr12	-	3637	19	FSM	ENSG00000075856.12	ENST00000546728.5	3637	19	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_12	80.1782735880211	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACTGACGTTCTCTTCA	-108560532	True	NA	-39	True	NA	NA	NA	108561161	108522707	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_108523635_108524315_108524507_108525456_108525610_108526098_108526554_108530141_108530311_108531203_108531281_108532221_108532335_108535358_108535469_108536513_108536573_108536707_108536786_108537487_108537596_108538064_108538204_108538944_108539090_108543027_108543153_108544426_108544479_108545138_108545324_108547886_108547992_108549087_108549215_108560842
transcript_49042.known	chr12	-	3704	19	FSM	ENSG00000075856.12	ENST00000228284.8	3704	19	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_15	70.6739383051175	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGACGTTCTCTTCAAAAC	-108560530	True	NA	-35	True	NA	NA	NA	108561159	108522703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_108523635_108524315_108524507_108525456_108525610_108526098_108526554_108530141_108530311_108531203_108531281_108532221_108532335_108535358_108535469_108536513_108536573_108536707_108536786_108537487_108537596_108538064_108538204_108538933_108539090_108543027_108543153_108544426_108544533_108545138_108545324_108547886_108547992_108549087_108549215_108560842
transcript_4905.known	chr1	+	3935	14	FSM	ENSG00000130695.16	ENST00000252992.8	3935	14	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_13	50.6650446122584	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCAGTTTTCCATACCCT	26228947	True	NA	15	True	AATAAA	-15	NA	26234201	26278808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26234311_26239761_26239839_26244165_26244319_26255170_26255866_26257596_26257731_26258142_26258261_26259616_26259803_26268482_26268636_26269459_26269615_26271013_26271108_26272020_26272072_26274963_26275072_26276534_26276761_26277132
transcript_49051.known	chr12	-	2834	18	FSM	ENSG00000075856.12	ENST00000431469.6	2834	18	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_10	80.2534480066434	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGACCTCCCACCACCCAG	-108560530	True	NA	NA	False	NA	NA	NA	108561159	108523411	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_108523635_108524315_108524507_108525456_108525610_108526098_108526554_108530141_108530311_108531203_108531281_108532221_108532335_108535358_108535469_108536513_108536573_108536707_108536786_108538064_108538204_108538933_108539090_108543027_108543153_108544426_108544479_108545138_108545324_108547886_108547992_108549087_108549215_108560842
transcript_49052.nic	chr12	-	2107	15	ISM	ENSG00000075856.12	ENST00000546815.6	4154	19	-241	7996	-14	0	5prime_fragment	FALSE	canonical	3	279	junction_6	25.2393642987315	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAGAGGCCCAGAGAAGC	-108561256	False	NA	NA	False	AAAAAG	-9	NA	108561414	108530209	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_108530311_108531203_108531281_108532221_108532335_108535358_108535469_108536513_108536573_108536707_108536786_108537487_108537596_108538064_108538204_108538933_108539090_108543027_108543153_108544426_108544479_108545138_108545324_108547886_108547992_108549087_108549215_108560842
transcript_49056.known	chr12	+	3255	3	FSM	ENSG00000198855.7	ENST00000552695.6	3255	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGAGACTGTCTTATTT	108514723	True	NA	NA	False	AATAAA	-19	NA	108515276	108521210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_108515362_108516914_108517274_108518399
transcript_49059.known	chr12	+	795	6	FSM	ENSG00000136003.16	ENST00000547005.5	795	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	696.051722216101	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTCTTTCAGCCCACTT	108552073	True	NA	11	True	AATACA	-24	NA	108562600	108569099	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_108562737_108564278_108564393_108565320_108565432_108567189_108567269_108567657_108567744_108568830
transcript_4906.known	chr1	+	3934	14	FSM	ENSG00000130695.16	ENST00000451429.8	3934	14	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_13	21.8964750885108	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCAGTTTTCCATACCCT	26228945	True	NA	15	True	AATAAA	-15	NA	26234199	26278808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26234311_26239761_26239839_26244165_26244319_26255170_26255866_26257596_26257731_26258142_26258261_26259616_26259803_26268482_26268636_26269459_26269615_26271013_26271108_26272020_26272072_26274963_26275072_26276534_26276761_26277135
transcript_49061.known	chr12	+	799	6	FSM	ENSG00000136003.16	ENST00000431221.6	799	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	700.43003933298	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGTGGTTTCTTTCAG	108552073	True	NA	4	True	AATACA	-17	NA	108562600	108569092	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_108562737_108564278_108564393_108565320_108565432_108567189_108567269_108567919_108568017_108568830
transcript_49062.known	chr12	+	1069	6	FSM	ENSG00000136003.16	ENST00000392807.8	1069	6	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_2	630.740200082411	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTCTCTAGTAAGCCT	108552078	True	NA	14	True	AATAAA	-15	NA	108562605	108569368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_108562737_108564059_108564156_108564278_108564393_108565320_108565432_108567189_108567269_108568830
transcript_49064.known	chr12	+	1330	5	FSM	ENSG00000136003.16	ENST00000535729.5	1330	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	611.512213696505	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCCCAGTTCTATAGAAGA	108552073	True	NA	NA	False	AAGAAA	-9	NA	108562600	108568547	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_108562737_108564278_108564393_108565320_108565432_108567189_108567269_108567657
transcript_49065.known	chr12	+	983	5	FSM	ENSG00000136003.16	ENST00000311893.14	983	5	0	0	0	0	multi-exon	FALSE	canonical	3	1381	junction_1	75.5360013503495	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTCTCTAGTAAGCCT	108552068	True	NA	14	True	AATAAA	-15	NA	108562595	108569368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_108562737_108564278_108564393_108565320_108565432_108567189_108567269_108568830
transcript_49067.known	chr12	+	1071	4	FSM	ENSG00000136003.16	ENST00000539593.1	1071	4	0	0	0	0	multi-exon	FALSE	canonical	3	1381	junction_1	42.4996732013579	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTTCTCAGGGAAAGAAG	108552082	True	NA	NA	False	ATTAAA	-26	NA	108562609	108567908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_108562737_108564278_108564393_108565320_108565432_108567189
transcript_49071.known	chr12	+	819	4	FSM	ENSG00000136003.16	ENST00000535405.1	819	4	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	577.922909122738	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAGAATCATGCCAGAAG	108552089	True	NA	NA	False	NA	NA	NA	108562616	108567444	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_108562737_108564059_108564393_108565320_108565432_108567189
transcript_49072.known	chr12	-	2662	2	FSM	ENSG00000183160.9	ENST00000392806.4	2662	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGTCTCACCAGTTTTC	-108598071	True	NA	NA	False	AATAAA	-14	NA	108598084	108589850	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_108592398_108597969
transcript_49077.known	chr12	-	2487	11	FSM	ENSG00000110880.11	ENST00000541050.5	2487	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_10	171.312025263844	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATGTGTTTCTGCAGTTT	-108730827	False	NA	-3	True	NA	NA	NA	108730843	108646566	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_108647523_108648604_108648851_108648962_108649021_108652271_108652418_108654305_108654411_108657303_108657424_108658737_108658920_108662028_108662159_108678271_108678395_108701123_108701324_108730622
transcript_49079.known	chr12	-	3814	11	FSM	ENSG00000110880.11	ENST00000261401.8	3814	11	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_1	55.1243140546892	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTTTGTGTTTATTTCA	-108726943	True	NA	NA	False	GATAAA	-18	NA	108731518	108645108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_108647523_108648604_108648851_108648962_108649021_108652271_108652418_108654305_108654411_108657303_108657424_108658737_108658920_108662028_108662159_108678271_108678395_108701123_108701324_108731428
transcript_49086.known	chr12	-	13034	15	FSM	ENSG00000084112.15	ENST00000326495.10	13034	15	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_1	7.38206596822215	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTTGTTGTTCAGTATGA	-108856183	True	NA	NA	False	AATAAA	-18	NA	108857583	108778190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_108789245_108792285_108792830_108798999_108799201_108800779_108800927_108802321_108802369_108805055_108805185_108806300_108806395_108807632_108807828_108809692_108809759_108811259_108811329_108817037_108817160_108818248_108818314_108823257_108823362_108852637_108852679_108857427
transcript_49095.known	chr12	-	2354	14	FSM	ENSG00000084112.15	ENST00000551165.5	2354	14	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	6.96653029697698	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTTATCGATATATGACT	-108856190	True	NA	-10	True	ATTAAA	-26	NA	108857590	108791918	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_108792830_108798999_108799201_108800779_108800927_108802321_108802369_108805055_108805185_108806300_108806395_108807632_108807828_108809692_108809759_108811259_108811329_108817037_108817160_108818248_108818314_108823257_108823362_108852637_108852679_108857427
transcript_491.known	chr1	-	1028	7	FSM	ENSG00000160087.21	ENST00000473215.5	1028	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	203.422931079288	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGGGTTTGCAGCCTTT	-1264086	True	NA	NA	False	NA	NA	NA	1273849	1255267	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1255488_1256044_1256126_1256991_1257131_1257207_1257311_1263345_1263387_1267732_1267993_1273665
transcript_49108.known	chr12	+	3749	13	FSM	ENSG00000135093.13	ENST00000257548.10	3749	13	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_5	4.96375753727848	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTGGTGTTCTTTTGTA	109051951	True	NA	NA	False	AATAAA	-24	NA	109052575	109088023	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_109052762_109056681_109056792_109057925_109058109_109067523_109067628_109071611_109071711_109072304_109072351_109073437_109073533_109081333_109081394_109081932_109082020_109082662_109082744_109082842_109083063_109084952_109085074_109085666
transcript_49119.known	chr12	-	1030	4	FSM	ENSG00000189046.11	ENST00000343075.7	1030	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	29.2232783924049	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTTTCTCTTTCCCT	-109091823	True	NA	-3	True	AATAAA	-17	NA	109093472	109088188	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_109088513_109090008_109090208_109092506_109092788_109093246
transcript_4912.nic	chr1	+	4362	13	ISM	ENSG00000130695.16	ENST00000451429.8	3934	14	-53	0	-53	0	intron_retention	FALSE	canonical	3	274	junction_3	10.1444429232079	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCAGTTTTCCATACCCT	26228892	True	NA	15	True	AATAAA	-15	NA	26234146	26278808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_26234311_26239761_26239839_26244165_26244319_26255170_26255866_26257596_26257731_26258142_26258261_26259616_26259803_26268482_26268636_26269459_26269615_26271013_26271108_26272020_26272072_26274963_26275072_26276534
transcript_49121.known	chr12	-	1180	4	FSM	ENSG00000189046.11	ENST00000429722.3	1180	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	26.8865931067677	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTTTCTCTTTCCCT	-109091823	True	NA	-3	True	AATAAA	-17	NA	109093472	109088188	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_109088513_109090008_109090208_109092506_109092938_109093246
transcript_49123.nic	chr12	-	862	3	NIC	ENSG00000189046.11	novel	1030	4	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_2	2	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTTTCTCTTTCCCTC	-109093474	False	NA	-2	True	AATAAA	-18	NA	109093502	109088187	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_109088513_109092506_109092788_109093246
transcript_49124.nic	chr12	-	1012	3	NIC	ENSG00000189046.11	novel	1180	4	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTTTCTCTTTCCCTC	-109093474	False	NA	-2	True	AATAAA	-18	NA	109093502	109088187	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_109088513_109092506_109092938_109093246
transcript_49125.known	chr12	-	574	2	FSM	ENSG00000189046.11	ENST00000440112.2	574	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCTTACTAAAAAATAAAAAC	-109092761	False	NA	-36	True	NA	NA	NA	109092789	109088221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_109088513_109092506
transcript_49126.known	chr12	+	2048	7	FSM	ENSG00000076248.11	ENST00000242576.7	2048	7	0	0	0	0	multi-exon	FALSE	canonical	3	693	junction_1	96.6639367430619	1061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGCAAGTGTCCTT	109089479	True	NA	23	True	AATAAA	-16	NA	109097596	109110992	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_109097812_109098431_109098639_109099188_109099285_109101901_109102000_109102838_109102928_109103432_109103612_109109828
transcript_49135.known	chr12	+	498	3	FSM	ENSG00000076248.11	ENST00000540158.1	498	3	0	0	0	0	multi-exon	FALSE	canonical	3	693	junction_1	149	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGACACTGGAGTTAAGCCA	109089561	False	NA	NA	False	TTTAAA	-4	NA	109097678	109099346	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_109097812_109098431_109098639_109099188
transcript_49136.known	chr12	+	2130	6	FSM	ENSG00000076248.11	ENST00000336865.6	2130	6	0	0	0	0	multi-exon	FALSE	canonical	3	869	junction_5	46.189176221275	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTGTTAAAAGTTTGT	109090000	False	NA	6	True	NA	NA	NA	109098117	109110975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_109098639_109099188_109099285_109101901_109102000_109102838_109102928_109103432_109103612_109109828
transcript_49137.known	chr12	+	2016	5	FSM	ENSG00000076248.11	ENST00000446767.2	2016	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	397.830051655226	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGCAAGTGTCCTT	109095645	True	NA	23	True	AATAAA	-16	NA	109098150	109110992	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_109098639_109099188_109099285_109102838_109102928_109103432_109103612_109109828
transcript_49142.known	chr12	-	3920	7	FSM	ENSG00000110906.13	ENST00000228495.11	3920	7	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_4	31.196954979613	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTCTGGCTCTTTTC	-109471716	True	NA	NA	False	AATAAA	-15	NA	109477300	109448654	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_109451814_109456117_109456314_109457629_109457683_109457991_109458079_109460635_109460806_109469514_109469729_109477259
transcript_49148.known	chr12	-	491	5	FSM	ENSG00000110906.13	ENST00000540355.5	491	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	93.8812414702746	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGAGGACGAGGAGCGGGA	-109458844	False	NA	NA	False	NA	NA	NA	109458871	109451681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_109451814_109456117_109456314_109457629_109457683_109457991_109458079_109458848
transcript_49150.known	chr12	-	708	2	FSM	ENSG00000110906.13	ENST00000538377.1	708	2	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCATGTGTGTATATGT	-109471716	True	NA	NA	False	NA	NA	NA	109477300	109469061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_109469729_109477259
transcript_49151.known	chr12	+	5730	28	FSM	ENSG00000151148.14	ENST00000342494.8	5730	28	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_16	55.2602770236927	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCTGCGTTCTGCATT	109475763	True	NA	14	True	ATTAAA	-17	NA	109477633	109536702	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_109478110_109481636_109481743_109483530_109483713_109483860_109483982_109486011_109486072_109486470_109486576_109488571_109488669_109489918_109490005_109491044_109491128_109497817_109497924_109498232_109498354_109499632_109499811_109501370_109501535_109503022_109503191_109507563_109507736_109509595_109509715_109510343_109510459_109511203_109511304_109516764_109516885_109521147_109521325_109521440_109521552_109523977_109524116_109524437_109524504_109526357_109526417_109529889_109530073_109530546_109530659_109533465_109533559_109534590
transcript_49153.known	chr12	+	5620	28	FSM	ENSG00000151148.14	ENST00000434735.6	5620	28	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_16	55.15791023714	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGCGTTCTGCATTTCA	109477334	True	NA	17	True	ATTAAA	-20	NA	109477401	109536705	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_109477765_109481636_109481743_109483530_109483713_109483860_109483982_109486011_109486072_109486470_109486576_109488571_109488669_109489918_109490005_109491044_109491128_109497817_109497924_109498232_109498354_109499632_109499811_109501370_109501535_109503022_109503191_109507563_109507736_109509595_109509715_109510343_109510459_109511203_109511304_109516764_109516885_109521147_109521325_109521440_109521552_109523977_109524116_109524437_109524504_109526357_109526417_109529889_109530073_109530546_109530659_109533465_109533559_109534590
transcript_49159.known	chr12	+	1448	9	FSM	ENSG00000151148.14	ENST00000340074.9	1448	9	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	53.2762552644234	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTAGAGAAAGAGTGGTA	109475781	True	NA	11	True	ATTAAA	-17	NA	109477651	109490722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_109478110_109481636_109481743_109483530_109483713_109483860_109483982_109486011_109486072_109486470_109486576_109488571_109488669_109489918_109490005_109490489
transcript_49161.known	chr12	+	1541	9	FSM	ENSG00000151148.14	ENST00000540230.5	1541	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	73.6206492772238	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTGGCATGTTCTTGAA	109475782	True	NA	NA	False	AAGAAA	-11	NA	109477652	109491149	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_109477777_109481636_109481743_109483530_109483713_109483860_109483982_109486011_109486072_109486470_109486576_109488571_109488669_109489918_109490005_109490489
transcript_49168.nic	chr12	+	2179	11	NIC	ENSG00000110921.14	novel	2747	10	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	47.0643176939813	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTAGAGACTCCAGGCCAC	109573259	True	NA	8	True	AATAAA	-16	NA	109573281	109597261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_109573572_109574808_109574901_109575997_109576146_109579801_109579947_109581394_109581551_109586021_109586126_109586753_109586800_109590770_109590862_109591240_109591358_109595027_109595182_109596425
transcript_49170.known	chr12	+	2833	11	FSM	ENSG00000110921.14	ENST00000228510.8	2833	11	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_4	23.1622537763491	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGACTAGGCGTGTTTA	109571717	True	NA	NA	False	CATAAA	-31	NA	109573793	109598125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_109573874_109574808_109574901_109575997_109576146_109579801_109579947_109581394_109581551_109586021_109586126_109586753_109586800_109590770_109590862_109591240_109591358_109595027_109595182_109596425
transcript_49173.known	chr12	+	1770	10	FSM	ENSG00000110921.14	ENST00000392727.7	1770	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	44.2537576000998	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTAGAGACTCCAGGCCAC	109571760	True	NA	8	True	AATAAA	-16	NA	109573836	109597261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_109573874_109574808_109574901_109575997_109576146_109579801_109579947_109586021_109586126_109586753_109586800_109590770_109590862_109591240_109591358_109595027_109595182_109596425
transcript_49175.known	chr12	-	1188	10	FSM	ENSG00000139428.12	ENST00000537496.5	1188	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	83.383984606691	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGCCGTGTGTGTGTG	-109570687	True	NA	-8	True	AATAAA	-11	NA	109573503	109556702	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_109557137_109559095_109559156_109561039_109561105_109561242_109561330_109561419_109561518_109561779_109561853_109565118_109565177_109568769_109568864_109571648_109571711_109573346
transcript_49181.known	chr12	+	1644	9	FSM	ENSG00000110921.14	ENST00000447878.6	1644	9	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	48.9029651452752	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGAATAAAAAGATTTTGT	109571716	True	NA	-17	True	NA	NA	NA	109573792	109597236	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_109573874_109574808_109574901_109575997_109576146_109586021_109586126_109586753_109586800_109590770_109590862_109591240_109591358_109595027_109595182_109596425
transcript_49182.known	chr12	-	4090	9	FSM	ENSG00000139428.12	ENST00000545712.7	4090	9	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_3	22.0850628253578	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGCCTGGAAGGATTTG	-109570688	True	NA	NA	False	AATAAA	-40	NA	109573504	109553714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_109557137_109559095_109559156_109561039_109561105_109561419_109561518_109561779_109561853_109565118_109565177_109568769_109568864_109571648_109571711_109573346
transcript_49193.known	chr12	+	702	5	FSM	ENSG00000110921.14	ENST00000545774.5	702	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	62.1168254179172	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTCCTGTATTTGCTTA	109571755	True	NA	NA	False	NA	NA	NA	109573831	109587069	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_109573874_109574808_109574901_109575997_109576146_109586021_109586126_109586753
transcript_49195.known	chr12	+	1725	9	FSM	ENSG00000110921.14	ENST00000636996.1	1725	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	49.1401058199919	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAGACTCCAGGCCACCA	109572753	False	NA	10	True	AATAAA	-18	NA	109574829	109597263	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_109574901_109575997_109576146_109581394_109581551_109586021_109586126_109586753_109586800_109590770_109590862_109591240_109591358_109595027_109595182_109596425
transcript_49198.known	chr12	-	3228	16	FSM	ENSG00000111199.12	ENST00000261740.7	3228	16	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_11	4.51368290128287	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGGCAGGATGATGGCA	-109832963	True	NA	-1	True	AATAAA	-20	NA	109833398	109783088	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_109783779_109784315_109784438_109786709_109786838_109788399_109788717_109792362_109792430_109792651_109792818_109793526_109793601_109793929_109794023_109794328_109794488_109796524_109796705_109798613_109798913_109800617_109800759_109802990_109803144_109808295_109808469_109814410_109814828_109833349
transcript_492.nic	chr1	-	3079	7	NIC	ENSG00000160087.21	novel	2260	7	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_6	204.058542798112	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATGCTGCTTGTGTCTG	-1264097	True	NA	-4	True	AAAAAG	-28	NA	1273860	1253911	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_1255488_1256044_1256126_1256991_1257131_1257207_1257311_1263345_1263387_1267861_1267993_1272852
transcript_49202.nic	chr12	-	2195	6	ISM	ENSG00000111199.12	ENST00000538125.5	2804	16	-43	14139	-38	-9092	5prime_fragment	FALSE	canonical	3	12	junction_1	6.3118935352238	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTAGCAAAAATTACTAAAA	-109833009	True	NA	NA	False	AATAAA	-23	NA	109833444	109797696	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_109798913_109800617_109800759_109802990_109803144_109808295_109808469_109814410_109814828_109833349
transcript_49207.known	chr12	-	973	6	FSM	ENSG00000139433.11	ENST00000537066.2	973	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	127.857107741416	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGCCCACTGCTGGACAC	-109876967	True	NA	NA	False	NA	NA	NA	109880378	109852554	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_109852738_109855618_109855770_109857525_109857660_109857854_109858194_109858682_109858742_109880271
transcript_49208.known	chr12	-	583	6	FSM	ENSG00000139433.11	ENST00000536390.5	583	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	127.857107741416	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGTGCCTGGAGAAGATC	-109876972	True	NA	NA	False	NA	NA	NA	109880383	109852664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_109852738_109855618_109855770_109857525_109857660_109858139_109858194_109858682_109858742_109880271
transcript_49211.nnic	chr12	-	2283	6	NNC	ENSG00000139433.11	novel	973	6	NA	NA	-30	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	105.308309263799	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACATCTGTGCACTGTATT	-109880510	False	NA	-4	True	AATAAA	-19	NA	109880571	109850947	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_109851864_109852014_109852738_109855618_109855770_109857525_109857660_109858682_109858742_109880271
transcript_49216.known	chr12	-	560	5	FSM	ENSG00000139433.11	ENST00000540772.1	560	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	112.594404834343	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGACACGTCCCCGACT	-109880264	False	NA	NA	False	NA	NA	NA	109880325	109852544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_109852738_109855618_109855739_109857525_109857660_109858682_109858742_109880271
transcript_49217.known	chr12	-	2407	5	FSM	ENSG00000139433.11	ENST00000318348.9	2407	5	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_4	11.5542200082913	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTGCACTGTATTGGT	-109877130	True	NA	-1	True	AATAAA	-22	NA	109880541	109850944	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_109852738_109855618_109855770_109857525_109857660_109858682_109858742_109880271
transcript_49220.known	chr12	-	914	5	FSM	ENSG00000139433.11	ENST00000544393.5	914	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	113.025163127509	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTCTAATGAGTCAAGTC	-109877010	True	NA	-20	True	NA	NA	NA	109880421	109852260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_109852738_109855618_109855770_109857582_109857660_109858682_109858742_109880271
transcript_49226.known	chr12	-	5598	20	FSM	ENSG00000139436.22	ENST00000355312.8	5598	20	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	30.5352981340115	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTGGTAATGCTGTGC	-109994286	True	NA	-12	True	AATAAA	-16	NA	109996368	109929803	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_109933191_109934021_109934086_109938379_109938569_109939164_109939248_109945259_109945350_109947255_109947505_109951166_109951317_109953091_109953235_109959846_109959959_109961277_109961376_109961612_109961686_109965525_109965578_109967457_109967504_109980951_109981047_109983372_109983504_109983607_109983695_109988962_109989069_109989689_109989803_109991626_109991761_109996172
transcript_49232.known	chr12	-	5444	19	FSM	ENSG00000139436.22	ENST00000361006.9	5444	19	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_4	25.4155585672232	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTGGTAATGCTGTGC	-109994222	True	NA	-12	True	AATAAA	-16	NA	109996304	109929803	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_109933191_109934021_109934086_109938379_109938569_109939164_109939248_109947255_109947505_109951166_109951317_109953091_109953235_109959846_109959959_109961277_109961376_109961612_109961686_109965525_109965578_109967457_109967504_109980951_109981047_109983372_109983504_109983607_109983695_109988962_109989069_109989689_109989803_109991626_109991761_109996172
transcript_49233.known	chr12	-	5387	19	NNC	ENSG00000139436.22	novel	5598	20	NA	NA	0	2	intron_retention	FALSE	non_canonical	0	0	junction_10	42.6956281914983	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGGTAATGCTGTGCTC	-109996377	False	NA	-10	True	AATAAA	-18	NA	109996389	109929801	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_109933191_109934021_109934086_109938379_109938569_109939164_109939248_109947255_109947505_109953091_109953235_109959846_109959959_109961277_109961376_109961612_109961686_109965525_109965578_109965759_109965766_109967457_109967504_109980951_109981047_109983372_109983504_109983607_109983695_109988962_109989069_109989689_109989803_109991626_109991761_109996172
transcript_49234.known	chr12	-	2127	19	FSM	ENSG00000139436.22	ENST00000551209.5	2127	19	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_6	39.6123577799768	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGGCAGGGCACCGCCTC	-109994142	True	NA	NA	False	NA	NA	NA	109996224	109932977	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_109933191_109934021_109934086_109938379_109938569_109939164_109939248_109945259_109945350_109947255_109947505_109953091_109953235_109959846_109959959_109961277_109961376_109961612_109961686_109965525_109965575_109967457_109967504_109980951_109981047_109983372_109983504_109983607_109983695_109988962_109989069_109989689_109989803_109991626_109991761_109996172
transcript_49238.nic	chr12	-	2119	18	ISM	ENSG00000139436.22	ENST00000355312.8	5598	20	-17	8621	4	110	5prime_fragment	FALSE	canonical	3	28	junction_3	32.0293982606788	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACAGGAGCTCTTAAGAG	-109994303	True	NA	NA	False	NA	NA	NA	109996385	109938424	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_109938569_109939164_109939248_109945259_109945350_109947255_109947505_109951166_109951317_109953091_109953235_109959846_109959959_109961277_109961376_109961612_109961686_109965525_109965578_109967457_109967504_109980951_109981047_109983372_109983504_109983607_109983695_109988962_109989069_109989689_109989803_109991626_109991761_109996172
transcript_4924.nic	chr1	+	1569	8	ISM	ENSG00000130695.16	ENST00000451429.8	3934	14	-53	10284	-53	-3869	5prime_fragment	FALSE	canonical	3	274	junction_3	8.43462252521458	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCCAGAAGGAATCAGAGCA	26228892	True	NA	NA	False	GATAAA	-25	NA	26234146	26268524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_26234311_26239761_26239839_26244165_26244319_26255170_26255866_26257596_26257731_26258142_26258261_26259616_26259803_26268482
transcript_49240.nic	chr12	-	3488	16	ISM	ENSG00000139436.22	ENST00000355312.8	5598	20	-17	13860	4	3658	5prime_fragment	FALSE	canonical	3	28	junction_1	30.1274330506637	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCTTGATACATTGTAC	-109994303	True	NA	NA	False	AAAAAG	-29	NA	109996385	109943663	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_109945350_109947255_109947505_109951166_109951317_109953091_109953235_109959846_109959959_109961277_109961376_109961612_109961686_109965525_109965578_109967457_109967504_109980951_109981047_109983372_109983504_109983607_109983695_109988962_109989069_109989689_109989803_109991626_109991761_109996172
transcript_49243.known	chr12	-	2989	15	FSM	ENSG00000139436.22	ENST00000547815.5	2989	15	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	30.2415446101578	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCCAATGGGAGAAGCGAG	-109994214	True	NA	NA	False	NA	NA	NA	109996296	109947321	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_109948847_109951166_109951317_109953091_109953235_109959846_109959959_109961277_109961376_109961612_109961686_109965525_109965578_109967457_109967504_109980951_109981047_109983372_109983504_109983607_109983695_109988962_109989069_109989689_109989803_109991626_109991761_109996172
transcript_49244.known	chr12	-	2094	14	FSM	ENSG00000139436.22	ENST00000320063.10	2094	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	34.9716706989999	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTTGTTGGCTTTTTG	-109994209	True	NA	0	True	AATAAA	-17	NA	109996291	109948061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_109948847_109953091_109953235_109959846_109959959_109961277_109961376_109961612_109961686_109965525_109965578_109967457_109967504_109980951_109981047_109983372_109983504_109983607_109983695_109988962_109989069_109989689_109989803_109991626_109991761_109996172
transcript_49246.known	chr12	+	3096	13	FSM	ENSG00000139437.18	ENST00000405876.9	3096	13	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_11	11.6904519445001	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTCCTGGCTTTGTTAC	109899356	True	NA	17	True	AATAAA	-18	NA	109900273	109918069	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_109900427_109903026_109903215_109903936_109904148_109904736_109904794_109906571_109906641_109907525_109907700_109908585_109908699_109908870_109908938_109911062_109911236_109912990_109913073_109914441_109914628_109915402_109915547_109916590
transcript_49252.nic	chr12	+	3729	15	NIC	ENSG00000076513.17	novel	1455	12	NA	NA	-44	0	combination_of_known_junctions	TRUE	canonical	3	22	junction_1	15.7397520920238	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCCAGTCTTTGAGTC	NA	False	NA	49	True	AATAAA	-28	NA	109999141	110039428	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_109999320_110012004_110012138_110013124_110013250_110016387_110016434_110018344_110018489_110019138_110019329_110024045_110024113_110025741_110025824_110027704_110027767_110028511_110028643_110029477_110029636_110030644_110030759_110033796_110033958_110036260_110036329_110037358
transcript_49254.known	chr12	+	4241	15	FSM	ENSG00000076513.17	ENST00000261739.9	4241	15	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	11.8107958224323	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTTCCTAGAAGTCCAGA	109998602	True	NA	NA	False	NA	NA	NA	109999429	110039763	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_109999785_110012004_110012138_110013124_110013250_110016387_110016434_110018344_110018489_110019138_110019329_110024045_110024113_110025741_110025824_110027704_110027767_110028511_110028643_110029477_110029636_110030644_110030759_110033796_110033958_110036260_110036329_110037358
transcript_49262.known	chr12	-	1755	2	FSM	ENSG00000174456.16	ENST00000546651.3	1755	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTGGCTGAATTCAACA	-110046278	True	NA	6	True	GATAAA	-24	NA	110048555	110027027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_110028590_110048362
transcript_49265.known	chr12	-	724	2	FSM	ENSG00000174456.16	ENST00000615315.2	1443	2	1	718	1	87	multi-exon	FALSE	canonical	3	79	junction_1	0	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGGTTGCAAAGTGGTGT	-110046244	True	NA	NA	False	NA	NA	NA	110048521	110041894	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_110042460_110048362
transcript_49266.known	chr12	+	3124	19	FSM	ENSG00000122970.16	ENST00000242591.10	3124	19	0	0	0	0	multi-exon	FALSE	canonical	2	50	junction_1	19.1740726432439	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTGTCTTGTGTCAAA	110122829	True	NA	20	True	AATAAA	-34	NA	110124356	110218793	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_110124862_110127359_110127525_110128045_110128150_110128949_110129131_110132546_110132637_110134947_110135014_110135326_110135438_110136775_110136861_110143381_110143546_110146952_110147049_110162918_110163066_110180421_110180572_110190919_110191049_110192616_110192707_110203863_110203951_110205442_110205515_110205594_110205681_110209170_110209217_110218043
transcript_49267.known	chr12	+	2710	19	FSM	ENSG00000122970.16	ENST00000552912.5	2710	19	0	0	0	0	multi-exon	FALSE	canonical	2	57	junction_1	18.0797274097227	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATCTATTTAAAAAATGTA	110122807	True	NA	2	True	AATAAA	-16	NA	110124334	110218775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_110124444_110127359_110127525_110128045_110128150_110128949_110129131_110132546_110132637_110134947_110135014_110135326_110135438_110136775_110136861_110143381_110143546_110146952_110147049_110162918_110163066_110180421_110180572_110190919_110191049_110192616_110192707_110203863_110203951_110205442_110205515_110205594_110205681_110209170_110209217_110218043
transcript_49272.known	chr12	+	3048	12	FSM	ENSG00000122970.16	ENST00000361948.8	3048	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_11	34.7624762073434	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTAATGAGCCTCCCTG	110122807	True	NA	NA	False	AGTAAA	-16	NA	110124334	110169182	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_110124862_110127359_110127525_110128045_110128150_110128949_110129131_110132546_110132637_110134947_110135014_110135326_110135438_110136775_110136861_110143381_110143546_110146952_110147049_110162918_110163066_110167870
transcript_4928.known	chr1	-	1792	16	FSM	ENSG00000158062.21	ENST00000374221.7	1792	16	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_15	36.9082947617771	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCGCTGCTCCGCCAGGC	-26305461	True	NA	NA	False	AATAAA	-15	NA	26306645	26282283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26284483_26285463_26285542_26285822_26286038_26294204_26294332_26296918_26296996_26297426_26297482_26297961_26298063_26300925_26301025_26301693_26301723_26302812_26302919_26303042_26303168_26306591
transcript_49284.known	chr12	+	4453	21	FSM	ENSG00000174437.18	ENST00000308664.10	4453	21	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_20	115.813762135594	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTCAGTGTGGTGGTG	110281076	False	NA	NA	False	AATAAA	-14	NA	110281115	110351090	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_110281908_110282603_110282622_110282712_110282796_110292019_110292125_110296598_110296738_110322991_110323073_110326389_110326476_110327552_110328018_110332596_110332686_110333180_110333284_110334011_110334144_110339280_110339404_110339502_110339722_110340658_110340995_110342227_110342449_110343231_110343435_110344885_110344972_110345248_110345383_110346000_110346119_110346200_110346322_110350291
transcript_49288.known	chr12	+	8295	20	FSM	ENSG00000174437.18	ENST00000539276.7	8295	20	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_3	56.6081442414414	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCAGTGTGGTGGTGACT	110280834	False	NA	NA	False	AATAAA	-17	NA	110281246	110351093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_110281908_110282603_110282622_110282712_110282796_110292019_110292125_110296598_110296738_110322991_110323073_110326389_110326476_110327552_110328018_110332596_110332686_110333180_110333284_110334011_110334144_110339280_110339404_110339502_110339722_110340658_110340995_110342227_110342449_110343231_110343435_110344885_110344972_110345248_110345383_110346000_110346119_110346200
transcript_49303.known	chr12	-	3023	11	FSM	ENSG00000196510.14	ENST00000455511.9	3023	11	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_10	34.9972856090297	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGAGTCTTTCAGTCTA	-110399157	True	NA	-6	True	AAAAAG	-3	NA	110403708	110372899	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_110374334_110376065_110376217_110377392_110377618_110381751_110381949_110382842_110382961_110386326_110386470_110387738_110387893_110388511_110388624_110395100_110395221_110396265_110396453_110403526
transcript_49315.known	chr12	-	2200	10	FSM	ENSG00000196510.14	ENST00000450008.3	2200	10	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_9	27.5886897562957	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATACAGAAGTGGTTTCTT	-110399179	True	NA	-24	True	AATAAA	-20	NA	110403730	110375476	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_110376217_110377392_110377618_110381751_110381949_110382842_110382961_110386326_110386470_110387738_110387893_110388511_110388624_110395100_110395221_110396265_110396453_110403526
transcript_49325.known	chr12	-	946	7	FSM	ENSG00000111229.16	ENST00000228825.12	946	7	0	0	0	0	multi-exon	FALSE	canonical	3	1969	junction_3	108.877096867166	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTAAAGTGTACAATTCA	-110423356	True	NA	57	True	GATAAA	-20	NA	110450337	110434822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_110435218_110436109_110436205_110436556_110436684_110437083_110437153_110440311_110440389_110445451_110445552_110450254
transcript_49332.known	chr12	-	837	2	FSM	ENSG00000111229.16	ENST00000475777.2	837	2	0	0	0	0	multi-exon	FALSE	canonical	3	1979	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATTATGTTAGACATGG	NA	False	NA	NA	False	NA	NA	NA	110450422	110444882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_110445552_110450254
transcript_49333.known	chr12	-	555	3	FSM	ENSG00000111229.16	ENST00000471641.1	555	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	988.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTAATTATATATATTTT	-110423304	True	NA	NA	False	AATAAA	-24	NA	110450285	110442643	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_110443068_110445451_110445552_110450254
transcript_49334.known	chr12	-	1491	8	FSM	ENSG00000111231.9	ENST00000537466.6	1491	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	234.470658710036	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACACTGCAGTGTCTAATT	-110461770	True	NA	-16	True	TATAAA	-42	NA	110468264	110452488	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_110453097_110453742_110453872_110455585_110455683_110455814_110455931_110457509_110457635_110459694_110459863_110465105_110465215_110468125
transcript_49337.known	chr12	-	1604	8	FSM	ENSG00000111231.9	ENST00000543199.5	1604	8	0	0	0	0	multi-exon	FALSE	canonical	2	28	junction_7	232.098940900959	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGCAGTGTCTAATTTG	-110468702	False	NA	-14	True	TATAAA	-44	NA	110468721	110452486	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_110453097_110453742_110453872_110455585_110455683_110455814_110455931_110457509_110457635_110459694_110459863_110465105_110465215_110468471
transcript_49343.nic	chr12	+	1213	7	NIC	ENSG00000204856.12	novel	1101	7	NA	NA	-2	-288	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	95.4602884275271	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGAAGATTTACTAAATA	110467843	True	NA	NA	False	AAGAAA	-5	NA	110468412	110490061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_110469019_110473077_110473119_110485077_110485200_110486324_110486459_110486533_110486718_110487860_110487944_110490018
transcript_49344.nic	chr12	+	1537	7	NIC	ENSG00000204856.12	novel	1101	7	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	95.4602884275271	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAATTACTTTTCTTTA	110467843	True	NA	17	True	ATTAAA	-18	NA	110468412	110490385	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_110469019_110473077_110473119_110485077_110485200_110486324_110486459_110486533_110486718_110487860_110487944_110490018
transcript_49346.nic	chr12	+	2680	6	NIC	ENSG00000204856.12	novel	1101	7	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_4	104.064210946896	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAATTACTTTTCTTTA	110467843	True	NA	17	True	ATTAAA	-18	NA	110468412	110490385	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_110469019_110473077_110473119_110485077_110485200_110486324_110486459_110486533_110487944_110490018
transcript_49348.known	chr12	-	564	5	FSM	ENSG00000111231.9	ENST00000550974.1	564	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	263.629000680881	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGCAAAAAAGGAAATTGA	-110461770	True	NA	NA	False	AGTAAA	-1	NA	110468264	110455837	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_110455931_110457509_110457635_110459694_110459863_110465105_110465215_110468195
transcript_49349.known	chr12	-	1457	8	FSM	ENSG00000111231.9	ENST00000228827.8	1457	8	0	0	0	0	multi-exon	FALSE	canonical	3	575	junction_4	59.0772583062179	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGCAGTGTCTAATTTGA	-110461763	True	NA	-13	True	TATAAA	-45	NA	110468257	110452485	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_110453097_110453742_110453872_110455585_110455683_110455814_110455931_110457509_110457635_110459694_110459863_110465105_110465215_110468155
transcript_49350.known	chr12	+	1101	7	FSM	ENSG00000204856.12	ENST00000377673.10	1101	7	0	0	0	0	multi-exon	FALSE	canonical	2	160	junction_4	39.0071218568553	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAATTACTTTTCTTTA	110466502	True	NA	17	True	ATTAAA	-18	NA	110468844	110490385	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_110469019_110473077_110473119_110485077_110485200_110486324_110486455_110486533_110486718_110487860_110487944_110490018
transcript_49353.known	chr12	-	4994	6	FSM	ENSG00000196850.6	ENST00000354300.5	4994	6	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_4	11.7029910706622	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTGCTTCTTTTGGTT	-110581107	True	NA	0	True	AATAAA	-38	NA	110583318	110533244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_110537096_110538143_110538274_110539821_110539946_110545879_110546079_110551788_110551969_110582808
transcript_49356.known	chr12	-	1091	5	FSM	ENSG00000111237.19	ENST00000360579.11	1091	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	754.103606940054	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTCTCTTACATTGTGT	-110485701	True	NA	-23	True	ATTAAA	-23	NA	110502099	110491522	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_110492123_110492995_110493232_110496011_110496204_110499534_110499547_110502048
transcript_49359.known	chr12	-	818	5	FSM	ENSG00000111237.19	ENST00000549970.5	818	5	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_3	763.751595743014	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATCTTCTCTGTTAATA	-110485713	True	NA	33	True	AGTAAA	-7	NA	110502111	110491885	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_110492123_110492995_110493232_110496011_110496204_110499456_110499547_110502048
transcript_49361.known	chr12	-	1531	4	FSM	ENSG00000111237.19	ENST00000549578.6	1531	4	0	0	0	0	multi-exon	FALSE	canonical	3	1350	junction_3	98.3881203307707	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAACAAAAAAAAAACAAA	-110485713	True	NA	NA	False	AAAACA	-4	NA	110502111	110491082	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_110492123_110492995_110493232_110496011_110496204_110502048
transcript_49367.known	chr12	+	2309	15	FSM	ENSG00000204852.17	ENST00000551590.5	2309	15	0	0	0	0	multi-exon	TRUE	non_canonical	1	11	junction_10	10.1055652479014	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGCTGTCGCAATAGTT	NA	False	NA	NA	False	NA	NA	NA	110614026	110649430	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_110614403_110619835_110619957_110626361_110626493_110628766_110628919_110632471_110632560_110634669_110634780_110636480_110636502_110640382_110640518_110641023_110641150_110641541_110641628_110642248_110642390_110644966_110645130_110647210_110647337_110647748_110647894_110649042
transcript_49376.known	chr12	-	1685	8	FSM	ENSG00000122986.14	ENST00000242607.13	1685	8	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_7	13.5586405916625	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACCCAAGACTCCACTATA	-110688278	True	NA	92	True	NA	NA	NA	110689115	110648685	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_110649476_110650167_110650281_110651216_110651449_110655233_110655339_110661163_110661449_110683224_110683265_110688624_110688709_110689079
transcript_49382.known	chr12	+	2149	4	FSM	ENSG00000204852.17	ENST00000550703.6	2149	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	5.31245915016974	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTATTTTGTCTCTT	NA	False	NA	NA	False	AATAGA	-27	NA	110614026	110630287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_110614403_110619835_110619957_110626361_110626493_110628766
transcript_49383.known	chr12	+	1879	15	FSM	ENSG00000204852.17	ENST00000397655.7	1879	15	0	0	0	0	multi-exon	FALSE	non_canonical	1	2	junction_5	15.773427668334	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTCCAGCTTTGTTGCT	110613252	True	NA	10	True	ATTAAA	-18	NA	110614112	110649128	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_110614403_110619835_110619957_110626361_110626493_110628766_110628919_110632471_110632560_110634395_110634464_110636480_110636502_110640382_110640518_110641023_110641150_110641541_110641628_110642248_110642390_110644966_110645130_110647210_110647337_110647748_110647894_110649042
transcript_49386.known	chr12	-	1472	8	FSM	ENSG00000186298.12	ENST00000340766.9	1472	8	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	659.451720316637	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTTCTCAGTGTCTATT	-110702335	True	NA	-8	True	ATTAAA	-14	NA	110742939	110719907	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_110720205_110721104_110721166_110722134_110722270_110722471_110722696_110724659_110724765_110730528_110730760_110731769_110731902_110742652
transcript_4939.known	chr1	-	1555	14	FSM	ENSG00000158062.21	ENST00000357089.8	1555	14	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_11	27.4551813370176	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCGCTGCTCCGCCAGGC	-26305448	True	NA	NA	False	AATAAA	-15	NA	26306632	26282283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26284483_26285463_26285542_26285822_26286038_26294204_26294332_26296918_26296996_26297426_26297482_26297961_26298063_26301693_26301723_26302812_26302919_26306591
transcript_49392.known	chr12	-	2552	7	FSM	ENSG00000186298.12	ENST00000335007.10	2552	7	0	0	0	0	multi-exon	FALSE	canonical	3	1809	junction_4	62.9481709203867	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTCCTCTACCATTTGG	-110702287	True	NA	NA	False	AATAGA	-16	NA	110742891	110719679	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_110721166_110722134_110722270_110722471_110722696_110724659_110724765_110730528_110730760_110731769_110731902_110742652
transcript_49404.known	chr12	-	1882	6	FSM	ENSG00000186298.12	ENST00000550991.5	1882	6	0	0	0	0	multi-exon	FALSE	canonical	3	1809	junction_3	68.3795291004552	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTAGGGGGGCTTTTAC	-110702269	True	NA	NA	False	NA	NA	NA	110742873	110721300	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_110722270_110722471_110722696_110724659_110724765_110730528_110730760_110731769_110731902_110742652
transcript_49406.known	chr12	-	1581	5	FSM	ENSG00000186298.12	ENST00000551676.5	1581	5	0	0	0	0	multi-exon	FALSE	canonical	3	1809	junction_2	76.2377039266005	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCTAGTCTAACTTCCAC	-110702235	True	NA	36	True	NA	NA	NA	110742839	110721769	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_110722696_110724659_110724765_110730528_110730760_110731769_110731902_110742652
transcript_49415.known	chr12	+	1416	3	FSM	ENSG00000185847.9	ENST00000553177.6	1416	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	3.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCTTTGACAATATGTTAA	110927271	True	NA	NA	False	ACTAAA	-24	NA	110936577	110959093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_110936699_110938289_110938513_110958021
transcript_49416.known	chr12	+	364	2	FSM	ENSG00000185847.9	ENST00000331096.2	364	2	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTGTTTAGATTTCAT	110927295	True	NA	20	True	AATAAA	-21	NA	110936601	110937451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_110936699_110937184
transcript_49417.known	chr12	+	1044	3	FSM	ENSG00000185847.9	ENST00000654512.1	1044	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGAGTGTAAGGAAGAAAA	110927267	True	NA	NA	False	AATATA	-34	NA	110936573	110943763	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_110936699_110938289_110938513_110943067
transcript_49418.known	chr12	+	6703	22	FSM	ENSG00000111249.14	ENST00000261726.11	6703	22	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	4.74425299788455	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGTGTCTTGCTTCTT	111033703	True	NA	NA	False	AATACA	-15	NA	111034164	111350554	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_111034241_111214199_111214311_111217889_111217938_111263760_111263840_111291417_111291553_111293445_111293570_111295332_111295410_111296472_111296540_111298540_111298590_111304209_111304315_111306920_111307113_111307198_111307258_111308284_111308334_111308426_111308527_111310040_111310683_111312099_111312202_111320011_111320776_111322420_111322581_111334440_111334711_111338285_111338475_111341779_111342054_111347523
transcript_49420.known	chr12	-	3256	4	FSM	ENSG00000198324.14	ENST00000361483.4	3256	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	24.7521042876493	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAATCCTTGATTGATTT	-111368306	True	NA	24	True	AGTAAA	-43	NA	111369121	111360650	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_111363464_111365563_111365652_111366112_111366258_111368911
transcript_49422.known	chr12	-	3114	3	FSM	ENSG00000198324.14	ENST00000683047.1	3114	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	1.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGATTGTGTCATTTTT	-111368280	True	NA	-4	True	AGTAAA	-15	NA	111369095	111360678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_111363464_111366112_111366258_111368911
transcript_49424.known	chr12	+	335	3	FSM	ENSG00000257595.3	ENST00000552663.2	335	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGGGGTCTCAGCGAGC	111369203	True	NA	13	True	AATAAA	-16	NA	111369260	111403310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_111369321_111371968_111372071_111403137
transcript_49431.nnic	chr12	+	2755	8	NNC	ENSG00000111252.11	novel	648	2	NA	NA	-898	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	14.2470906446451	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCAGCTTTACAGTGATA	111404491	True	NA	2	True	AATAAA	-18	NA	111405024	111449202	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_111405125_111418118_111418878_111446752_111446855_111446941_111447034_111447124_111447220_111447329_111447545_111447655_111447828_111447982
transcript_49432.nnic	chr12	+	5176	8	NNC	ENSG00000111252.11	novel	648	2	NA	NA	-898	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	14.2470906446451	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCTGTCATAATATTTAA	111404491	True	NA	11	True	ATTAAA	-19	NA	111405024	111451623	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_111405125_111418118_111418878_111446752_111446855_111446941_111447034_111447124_111447220_111447329_111447545_111447655_111447828_111447982
transcript_49433.known	chr12	+	5431	8	FSM	ENSG00000111252.11	ENST00000341259.7	5431	8	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_1	9.65739644637461	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCTGTCATAATATTTAA	111405121	True	NA	11	True	ATTAAA	-19	NA	111405922	111451623	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_111406278_111418118_111418878_111446752_111446855_111446941_111447034_111447124_111447220_111447329_111447545_111447655_111447828_111447982
transcript_49439.known	chr12	-	3996	12	FSM	ENSG00000089234.16	ENST00000419234.9	3996	12	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_7	21.0076727423479	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCCCCGTGTGAAATGT	-111679423	True	NA	-3	True	ATTAAA	-21	NA	111685956	111642145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_111644563_111649938_111650043_111655565_111655656_111658735_111658846_111659206_111659346_111660599_111660676_111665638_111665788_111672660_111672775_111679150_111679341_111681636_111681836_111683145_111683308_111685710
transcript_4944.known	chr1	-	2646	14	FSM	ENSG00000158062.21	ENST00000472155.5	2646	14	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_11	30.7649997090946	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGCTCCGCCAGGCTCT	-26305456	True	NA	NA	False	AATAAA	-18	NA	26306640	26282280	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26285542_26285822_26286038_26294204_26294332_26296918_26296996_26297426_26297482_26297961_26298063_26300925_26301025_26301693_26301723_26302812_26302919_26306591
transcript_49441.known	chr12	-	1947	12	FSM	ENSG00000089234.16	ENST00000327551.6	1947	12	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_11	64.6516412068851	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTTGGCTCTTTCATTT	-111679187	False	NA	-16	True	NA	NA	NA	111685720	111644081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_111644563_111649938_111650043_111655565_111655656_111658735_111658846_111659206_111659346_111660599_111660676_111665638_111665788_111672660_111672775_111679150_111679341_111681636_111681836_111683145_111683308_111685587
transcript_49455.known	chr12	+	4071	22	FSM	ENSG00000111271.15	ENST00000455480.6	4071	22	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	34.844715453155	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTTTGTGGACTTTCTG	111683191	True	NA	13	True	AGTAAA	-10	NA	111686075	111757094	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_111686240_111692696_111692897_111702161_111702311_111705737_111705933_111709525_111709685_111710272_111710366_111712497_111712658_111715820_111715963_111721670_111721740_111727961_111728144_111729805_111729957_111733922_111734069_111736830_111737005_111744642_111745044_111746143_111746285_111747048_111747187_111747294_111747386_111748316_111748476_111749172_111749346_111753771_111753916_111755667_111755746_111756332
transcript_49467.known	chr12	+	4006	21	FSM	ENSG00000111271.15	ENST00000313698.9	4006	21	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_13	20.1702751592535	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGGACTTTCTGTGTCA	111683168	True	NA	18	True	AGTAAA	-15	NA	111686052	111757099	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_111686240_111692696_111692897_111702161_111702311_111705737_111705933_111709525_111709685_111712497_111712658_111715820_111715963_111721670_111721740_111727961_111728144_111729805_111729957_111733922_111734069_111736830_111737005_111744642_111745044_111746143_111746285_111747048_111747187_111747294_111747386_111748316_111748476_111749172_111749346_111753771_111753916_111755667_111755746_111756332
transcript_49487.nnic	chr12	+	3753	19	NIC	ENSG00000111271.15	novel	4006	21	NA	NA	-44	0	intron_retention	FALSE	canonical	2	4	junction_9	31.8834683739952	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGGACTTTCTGTGTCA	NA	False	NA	18	True	AGTAAA	-15	NA	111686008	111757099	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_111686240_111692696_111692897_111702161_111702311_111705737_111705933_111709525_111709685_111712497_111712658_111715820_111715963_111721670_111721740_111727961_111728144_111736830_111737005_111744642_111745044_111746143_111746285_111747048_111747187_111747294_111747386_111748316_111748476_111749172_111749346_111753771_111753916_111755667_111755746_111756332
transcript_495.known	chr1	-	1056	7	FSM	ENSG00000160087.21	ENST00000435198.5	1056	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_6	206.590375703549	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGTCCAGAACGGGATTCA	-1264081	True	NA	NA	False	NA	NA	NA	1273844	1255394	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1255488_1256044_1256126_1256991_1257131_1257207_1257311_1263345_1263387_1267861_1267993_1273376
transcript_49502.known	chr12	+	2951	18	FSM	ENSG00000111271.15	ENST00000413681.7	2951	18	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_17	30.8623464607885	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATGGCTATTGCTCACAG	111683183	True	NA	NA	False	AATAAA	-18	NA	111686067	111749132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_111686240_111692696_111692897_111702161_111702311_111705737_111705933_111709525_111709685_111712497_111712658_111715820_111715963_111721670_111721740_111727961_111728144_111729805_111729957_111733922_111734069_111736830_111737005_111744642_111745044_111746143_111746285_111747048_111747187_111747294_111747386_111748316_111748476_111749010
transcript_49520.known	chr12	+	1760	14	FSM	ENSG00000111275.13	ENST00000548536.1	1760	14	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	101.398796720333	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAACCAAGAAAAATGAT	111765008	True	NA	NA	False	NA	NA	NA	111766947	111809630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_111767097_111775604_111775721_111781917_111782023_111783157_111783299_111785266_111785347_111789822_111789935_111790433_111790563_111791305_111791420_111792060_111792164_111792597_111792783_111798077_111798243_111799905_111800064_111803858_111803974_111809542
transcript_49523.known	chr12	+	2888	13	FSM	ENSG00000111271.15	ENST00000549590.5	2888	13	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_10	18.3913853625972	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAGCGATTCTCCTGCCT	111683186	True	NA	NA	False	NA	NA	NA	111686070	111745634	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_111686240_111692696_111692897_111702161_111702311_111705737_111705933_111709525_111709685_111712497_111712658_111715820_111715963_111721670_111721740_111727961_111728144_111729805_111729957_111733922_111734069_111736830_111737005_111744642
transcript_49526.known	chr12	+	9561	13	FSM	ENSG00000111275.13	ENST00000261733.7	9561	13	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_5	48.0597862620669	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTGGTGATATTCTTTA	111764993	True	NA	NA	False	ATTAAA	-16	NA	111766932	111817532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_111767097_111781917_111782023_111783157_111783299_111785266_111785347_111789822_111789935_111790433_111790563_111791305_111791420_111792060_111792164_111792597_111792783_111798077_111798243_111799905_111800064_111803858_111803974_111809542
transcript_4954.known	chr1	-	2542	13	FSM	ENSG00000158062.21	ENST00000475591.5	2542	13	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_10	28.4608649435208	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCTGCTCCGCCAGGCTC	-26305452	True	NA	NA	False	AATAAA	-17	NA	26306636	26282281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26285542_26285822_26286038_26294204_26294332_26296918_26296996_26297426_26297482_26297961_26298063_26301693_26301723_26302812_26302919_26306591
transcript_49543.known	chr12	+	622	2	FSM	ENSG00000111271.15	ENST00000511915.1	622	2	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATTTGGCGGAGAGTTAT	111683171	True	NA	NA	False	ATTAAA	-28	NA	111686055	111693134	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_111686240_111692696
transcript_49581.known	chr12	+	11083	14	FSM	ENSG00000089022.14	ENST00000550735.7	11083	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	134.130334919295	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCAGGTTCCACATGGT	111839000	True	NA	20	True	AATAAA	-21	NA	111842227	111902222	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_111842770_111865249_111865324_111866155_111866232_111867571_111867670_111868752_111868862_111870270_111870361_111871084_111871181_111880446_111880528_111883580_111883769_111885915_111886037_111888487_111888619_111888884_111889001_111890039_111890145_111892966
transcript_49584.known	chr12	+	1630	14	FSM	ENSG00000089022.14	ENST00000551404.6	1630	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	138.047843520251	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATTAAAGCTGCTGTATA	111842608	False	NA	NA	False	AATAAA	-20	NA	111842625	111893161	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_111842770_111865249_111865324_111866155_111866232_111867571_111867670_111868752_111868862_111870270_111870361_111871084_111871181_111880446_111880528_111883580_111883769_111885915_111886037_111888487_111888619_111888884_111889007_111890039_111890145_111892966
transcript_496.known	chr1	-	1047	7	FSM	ENSG00000160087.21	ENST00000360466.6	1047	7	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_6	191.430361576562	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCACCAGAGCGTGACCTC	-1263963	False	NA	NA	False	NA	NA	NA	1273726	1255163	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1255488_1256044_1256126_1256991_1257131_1257207_1257311_1263345_1263387_1267861_1267993_1273498
transcript_49678.known	chr12	-	543	4	FSM	ENSG00000234608.9	ENST00000590479.6	772	4	220	9	0	-4	multi-exon	FALSE	canonical	3	35	junction_3	59.606114526019	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGTTTACTTACTTTGAG	-111837424	False	NA	-14	True	AATAAA	-13	NA	111841710	111839776	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_111840004_111840332_111840478_111841326_111841471_111841683
transcript_49679.known	chr12	-	662	3	FSM	ENSG00000234608.9	ENST00000442119.7	686	3	19	5	-7	0	multi-exon	FALSE	canonical	3	23	junction_2	17	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTTTGAGTCTTTTGTT	-111837678	True	NA	-5	True	AATAAA	-22	NA	111841964	111839767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_111840004_111840332_111840478_111841683
transcript_4968.nic	chr1	-	2420	11	NIC	ENSG00000158062.21	novel	2542	13	NA	NA	-4	0	intron_retention	FALSE	canonical	3	26	junction_10	28.2460616723819	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCTGCTCCGCCAGGCTC	-26305465	True	NA	NA	False	AATAAA	-17	NA	26306649	26282281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26285542_26285822_26286038_26294204_26294332_26296918_26296996_26297426_26297482_26297961_26298063_26306591
transcript_49681.known	chr12	-	852	3	FSM	ENSG00000234608.9	ENST00000656227.2	1067	3	210	5	20	0	multi-exon	FALSE	canonical	3	35	junction_2	68	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACTTACTTTGAGTCTT	-111837400	False	NA	-10	True	AATAAA	-17	NA	111841686	111839772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_111840478_111841326_111841471_111841683
transcript_49682.nnic	chr12	-	874	2	FSM	ENSG00000234608.9	ENST00000692189.1	877	2	-12	15	-12	0	multi-exon	FALSE	canonical	3	56	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACTTACTTTGAGTCTT	-111837683	True	NA	-10	True	AATAAA	-17	NA	111841969	111839772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_111840004_111841326
transcript_49683.known	chr12	-	930	2	FSM	ENSG00000234608.9	ENST00000443596.2	986	2	53	3	-5	1	multi-exon	FALSE	canonical	3	23	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTTGAGTCTTTTGTTC	-111837616	True	NA	-4	True	AATAAA	-23	NA	111841902	111839766	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_111840478_111841683
transcript_49685.known	chr12	-	1534	11	FSM	ENSG00000198270.13	ENST00000552374.7	1534	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_9	9.86356933366416	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATTTCAAAGCTG	-112012335	True	NA	-5	True	AATAAA	-18	NA	112013165	111931297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_111931828_111932585_111932660_111933885_111934031_111936691_111936831_111937159_111937244_111938160_111938211_111943264_111943370_111991757_111991890_112003799_112003864_112005256_112005304_112013001
transcript_49689.known	chr12	-	1446	10	FSM	ENSG00000198270.13	ENST00000550831.7	1446	10	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_4	6.9602043392737	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCTACTCCATGGTTGC	-112012295	True	NA	11	True	AATAAA	-34	NA	112013125	111931281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_111931828_111932585_111932660_111933885_111934031_111936691_111936831_111937159_111937244_111938160_111938211_111943264_111943370_111991757_111991890_112005256_112005304_112013001
transcript_49695.known	chr12	-	1229	9	FSM	ENSG00000198270.13	ENST00000549537.6	1229	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	8.13076718397471	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTGTTACCTTGATGGATA	-112012305	True	NA	-77	True	NA	NA	NA	112013135	111931369	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_111931828_111932585_111932660_111933885_111934031_111937159_111937244_111938160_111938211_111943264_111943370_111991757_111991890_112005256_112005304_112013001
transcript_49696.known	chr12	-	2761	1	FSM	ENSG00000198270.13	ENST00000437003.3	2761	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTCATTGTCCACGTACC	-112012355	True	NA	-5	True	AATAAA	-21	NA	112013185	112010424	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_112010400_112013200
transcript_49697.known	chr12	+	1623	3	FSM	ENSG00000089248.7	ENST00000261735.4	1623	3	0	0	0	0	multi-exon	FALSE	canonical	3	1928	junction_2	99	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACATCTTTTCTTCAGAC	111997694	True	NA	NA	False	AATAAA	-44	NA	112013425	112023449	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_112013610_112019755_112019895_112022149
transcript_49699.known	chr12	+	1333	2	FSM	ENSG00000089248.7	ENST00000455836.1	1333	2	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATGAATATATTGAACCAA	112013310	False	NA	-17	True	NA	NA	NA	112013347	112023220	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_112013610_112022149
transcript_497.known	chr1	-	2260	7	FSM	ENSG00000160087.21	ENST00000349431.11	2260	7	0	0	0	0	multi-exon	FALSE	canonical	3	470	junction_5	53.1750254662218	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATGCTGCTTGTGTCTG	-1264091	True	NA	-4	True	AAAAAG	-28	NA	1273854	1253911	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1255488_1256044_1256126_1256991_1257131_1257207_1257311_1263345_1263387_1267861_1267993_1273665
transcript_49702.known	chr12	-	5771	24	FSM	ENSG00000111300.10	ENST00000261745.9	5771	24	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_18	14.678018749291	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGCCTGGTTCCTTTTT	-112105688	True	NA	0	True	TATAAA	-22	NA	112108783	112026688	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_112029654_112033232_112033380_112039228_112039340_112040480_112040579_112042038_112042105_112043087_112043212_112043624_112043869_112047664_112047791_112048291_112048444_112053557_112053658_112054387_112054569_112060269_112060360_112061180_112061389_112068879_112068993_112071894_112072065_112074674_112074765_112075677_112075790_112078187_112078267_112078633_112078742_112081059_112081135_112087682_112087802_112090725_112090865_112093050_112093137_112108715
transcript_49715.known	chr12	-	2815	23	FSM	ENSG00000111300.10	ENST00000551858.1	2815	23	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_22	51.0745080436496	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAGAAAAAGAAGAAA	-112105684	True	NA	NA	False	ACTAAA	-6	NA	112108779	112039269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_112039340_112040480_112040579_112042038_112042105_112043087_112043212_112043624_112043869_112047664_112047791_112048291_112048444_112053557_112053658_112054387_112054569_112060269_112060360_112061180_112061389_112068879_112068993_112071894_112072065_112074674_112074765_112075677_112075790_112078187_112078267_112078633_112078742_112081059_112081135_112087682_112087802_112090725_112090865_112093050_112093137_112097240_112097442_112108715
transcript_49722.nic	chr12	-	3331	22	ISM	ENSG00000111300.10	ENST00000261745.9	5771	24	-705	12573	-692	0	5prime_fragment	FALSE	canonical	3	136	junction_16	14.5994129040471	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAGAAAAAAGAAAC	NA	False	NA	NA	False	AAAAAG	-1	NA	112109488	112039261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_112039340_112040480_112040579_112042038_112042105_112043087_112043212_112043624_112043869_112047664_112047791_112048291_112048444_112053557_112053658_112054387_112054569_112060269_112060360_112061180_112061389_112068879_112068993_112071894_112072065_112074674_112074765_112075677_112075790_112078187_112078267_112078633_112078742_112081059_112081135_112087682_112087802_112090725_112090865_112093050_112093137_112108715
transcript_49742.known	chr12	+	2633	12	FSM	ENSG00000135148.12	ENST00000412615.7	2633	12	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_7	21.5326006920201	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGTCTTGTGGTTCCTT	112121761	True	NA	15	True	AATAAA	-19	NA	112125559	112153604	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_112125619_112130510_112130570_112134737_112134874_112135012_112135067_112140818_112141225_112142088_112142296_112145585_112145663_112148073_112148305_112149750_112149872_112151800_112152141_112152426_112152500_112152734
transcript_49745.known	chr12	+	3178	12	FSM	ENSG00000135148.12	ENST00000257604.9	3178	12	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	68.8943375907347	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCAGTCTTGTGGTTCCT	112121746	True	NA	14	True	AATAAA	-18	NA	112125544	112153603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_112126150_112130510_112130570_112134737_112134874_112135012_112135067_112140818_112141225_112142088_112142296_112145585_112145663_112148073_112148305_112149750_112149872_112151800_112152141_112152426_112152500_112152734
transcript_49755.known	chr12	-	15759	76	FSM	ENSG00000173064.14	ENST00000377560.9	15759	76	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_59	9.32571117335771	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGGCATTTGACGTGA	-112381079	True	NA	-2	True	ATTAAA	-20	NA	112382439	112160189	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_112162524_112163041_112163265_112163541_112163738_112164108_112164276_112167316_112167539_112167813_112167918_112169502_112169659_112170332_112170453_112171116_112171264_112172670_112172862_112175735_112175860_112176595_112176703_112178930_112179083_112179173_112179398_112183058_112183267_112184186_112185494_112190785_112190966_112192559_112192766_112193060_112193192_112193468_112193675_112194884_112195067_112200637_112200799_112203635_112203773_112204485_112204624_112207873_112208001_112208493_112208631_112210014_112210253_112212486_112212651_112216291_112216372_112216772_112216922_112217033_112217196_112219385_112219490_112226642_112226759_112228088_112228259_112228646_112228812_112229697_112229881_112230686_112230823_112231512_112231716_112233003_112233086_112235076_112235267_112235503_112235785_112236944_112237099_112239051_112239237_112239880_112240028_112243352_112243520_112243619_112243762_112243873_112244010_112246900_112247077_112247461_112247551_112248066_112248172_112248319_112248513_112250143_112250378_112250970_112251135_112252423_112252529_112254042_112254163_112256319_112256519_112258495_112258597_112259111_112259266_112261304_112261430_112264089_112264213_112265174_112265296_112265877_112265984_112266911_112266983_112269703_112269850_112270226_112270460_112273654_112273796_112274846_112274961_112279227_112279387_112283109_112283303_112306063_112306235_112308752_112308892_112309560_112309670_112313016_112313148_112314456_112314547_112319224_112319743_112381951
transcript_49759.known	chr12	+	6073	16	FSM	ENSG00000179295.19	ENST00000351677.7	6073	16	0	0	0	0	multi-exon	FALSE	canonical	3	657	junction_6	53.4935094712953	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCGTTTGCTTCATCAG	112401272	True	NA	4	True	AATAAA	-23	NA	112418946	112509918	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_112419126_112446275_112446399_112450317_112450513_112453194_112453388_112454563_112454681_112455949_112456064_112472943_112473041_112477650_112477731_112477856_112478016_112482073_112482206_112486474_112486630_112488442_112488511_112489023_112489176_112502143_112502257_112504694_112504797_112505824
transcript_49767.nic	chr12	+	1050	7	ISM	ENSG00000179295.19	ENST00000392597.5	1876	11	-17	13906	-15	-13906	5prime_fragment	FALSE	canonical	3	657	junction_6	66.8499563699683	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGATATAAAAACATCCTGC	112401217	True	NA	NA	False	AAGAAA	-14	NA	112418891	112473017	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_112419126_112446275_112446399_112450317_112450513_112453194_112453388_112454563_112454681_112455949_112456064_112472943
transcript_49770.known	chr12	-	1074	7	FSM	ENSG00000089009.16	ENST00000424576.6	1074	7	0	0	0	0	multi-exon	FALSE	canonical	3	1588	junction_6	3626.88660867999	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCTGACTACATTTTGTG	-112279264	True	NA	-33	True	NA	NA	NA	112409596	112405202	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_112405377_112405852_112406038_112406293_112406343_112406746_112406891_112408239_112408339_112408419_112408657_112409410
transcript_49771.known	chr12	-	921	7	FSM	ENSG00000089009.16	ENST00000202773.14	921	7	0	0	0	0	multi-exon	FALSE	canonical	3	6734	junction_6	1778.01750553812	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCTCTTTTTTTAAT	-112279273	True	NA	-19	True	ATTAAA	-14	NA	112409605	112405188	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_112405377_112405852_112406038_112406293_112406343_112406746_112406891_112408239_112408339_112408419_112408657_112409586
transcript_49781.nic	chr12	-	775	6	ISM	ENSG00000089009.16	ENST00000202773.14	921	7	-45	667	-15	438	5prime_fragment	FALSE	canonical	3	6734	junction_5	1921.2289192077	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTAAGTTTCTACTTGTC	-112409546	False	NA	NA	False	NA	NA	NA	112409650	112405855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_112406038_112406293_112406343_112406746_112406891_112408239_112408339_112408419_112408657_112409586
transcript_49784.nic	chr12	+	607	4	ISM	ENSG00000179295.19	ENST00000392597.5	1876	11	-17	33674	-15	-4237	5prime_fragment	FALSE	canonical	3	819	junction_1	14.4452991200136	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAACATGGTAGTTTTCT	112401217	True	NA	NA	False	NA	NA	NA	112418891	112453249	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_112419126_112446275_112446399_112450317_112450513_112453194
transcript_49788.nic	chr12	-	303	2	ISM	ENSG00000089009.16	ENST00000549562.1	583	3	-36	397	-15	-158	5prime_fragment	FALSE	canonical	3	6734	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGGAAGAGGACCACGGAC	-112409546	False	NA	NA	False	NA	NA	NA	112409650	112408417	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_112408657_112409586
transcript_49789.known	chr12	+	998	2	FSM	ENSG00000111331.14	ENST00000551007.1	998	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCCTCTGTGTCCTCATC	NA	False	NA	NA	False	GATAAA	-3	NA	112938443	112942303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_112938708_112941569
transcript_49793.known	chr12	-	2502	21	FSM	ENSG00000111344.12	ENST00000548055.2	3368	21	257	609	0	1	multi-exon	FALSE	canonical	2	14	junction_3	6.15304802516606	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCCTCTTCAGCGCATCC	-113135169	False	NA	NA	False	NA	NA	NA	113135504	113099886	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_113100069_113100627_113100681_113101888_113102010_113103945_113104082_113104160_113104299_113105713_113105887_113107096_113107242_113108084_113108223_113112085_113112279_113114799_113114913_113115199_113115265_113115634_113115789_113115933_113116052_113117072_113117162_113119127_113119260_113119361_113119444_113121508_113121639_113127811_113127874_113128064_113128179_113130884_113130942_113135397
transcript_49794.known	chr12	-	3040	21	FSM	ENSG00000111344.12	ENST00000446861.7	3040	21	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	8.86622805932715	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGTCTGCTAATCCC	-113135415	True	NA	-14	True	ACTAAA	-19	NA	113135750	113099507	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_113100069_113100627_113100681_113101888_113102010_113103945_113104082_113104160_113104215_113105713_113105884_113107096_113107242_113108084_113108223_113112085_113112279_113114799_113114913_113115199_113115265_113115634_113115789_113115933_113116052_113117072_113117162_113119127_113119260_113119361_113119444_113121508_113121639_113127811_113127874_113128064_113128179_113130884_113130942_113135397
transcript_49801.nic	chr12	-	2621	18	ISM	ENSG00000111344.12	ENST00000418411.6	2472	20	461	705	-17	-705	internal_fragment	FALSE	canonical	2	14	junction_5	6.27291646436154	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCATAGGACGCTGCTTGG	-113135443	True	NA	-9	True	ATTAAA	-19	NA	113135778	113103744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_113104082_113104160_113104299_113105713_113105887_113107096_113107242_113108084_113108223_113112085_113112279_113114799_113114913_113115199_113115265_113115634_113115789_113115933_113116052_113117072_113117162_113119127_113119260_113119361_113119444_113121508_113121639_113127811_113127874_113128064_113128179_113130884_113130942_113135397
transcript_49803.nic	chr12	-	3092	16	ISM	ENSG00000111344.12	ENST00000418411.6	2472	20	337	1852	-141	-1852	internal_fragment	FALSE	canonical	2	14	junction_3	6.39583197611278	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTTGGAATCGCGTCCCA	NA	False	NA	-8	True	ATTAAA	-19	NA	113135902	113104891	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_113105887_113107096_113107242_113108084_113108223_113112085_113112279_113114799_113114913_113115199_113115265_113115634_113115789_113115933_113116052_113117072_113117162_113119127_113119260_113119361_113119444_113121508_113121639_113127811_113127874_113128064_113128179_113130884_113130942_113135397
transcript_49808.known	chr12	-	4377	20	FSM	ENSG00000123064.13	ENST00000306014.10	4377	20	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_1	59.5755531858171	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTGAGGGTGAACTTAC	-113176710	True	NA	-1	True	AATAAA	-26	NA	113185478	113157172	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_113159110_113161269_113161383_113161892_113161998_113162931_113163046_113163131_113163275_113164066_113164286_113165643_113165718_113165801_113166033_113169769_113169905_113172352_113172564_113174639_113174772_113174874_113174937_113175035_113175158_113176839_113176936_113177051_113177094_113178976_113179027_113179142_113179332_113179934_113180006_113180928_113181059_113185277
transcript_49815.known	chr12	-	4380	20	FSM	ENSG00000123064.13	ENST00000314045.11	4380	20	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	65.8698035895868	846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTTGAGGGTGAACTTA	-113176711	True	NA	-2	True	AATAAA	-25	NA	113185479	113157173	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_113159113_113161269_113161383_113161892_113161998_113162931_113163046_113163131_113163275_113164066_113164286_113165643_113165718_113165801_113166033_113169769_113169905_113172352_113172564_113174639_113174772_113174874_113174937_113175035_113175158_113176839_113176936_113177051_113177094_113178976_113179027_113179142_113179332_113179934_113180006_113180928_113181059_113185277
transcript_4984.nnic	chr1	-	2148	7	NIC	ENSG00000158062.21	novel	2542	13	NA	NA	-92	0	intron_retention	FALSE	canonical	2	10	junction_6	38.9172912155452	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCTGCTCCGCCAGGCTC	-26305553	True	NA	NA	False	AATAAA	-17	NA	26306737	26282281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26285542_26285822_26286038_26306591
transcript_49848.known	chr12	+	1287	5	FSM	ENSG00000186710.12	ENST00000551256.1	1287	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACCTGCTGGGACAGGGA	NA	False	NA	NA	False	NA	NA	NA	113152995	113159104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_113153409_113154413_113154636_113155259_113155419_113157601_113157691_113158700
transcript_4985.known	chr1	+	751	3	FSM	ENSG00000142669.15	ENST00000270792.10	751	3	0	0	0	0	multi-exon	FALSE	canonical	3	2676	junction_1	71	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTCTGGTTGGTTGTGG	26270876	True	NA	29	True	ATTAAA	-22	NA	26280085	26281522	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26280204_26280764_26280933_26281057
transcript_49852.known	chr12	+	1858	4	FSM	ENSG00000139405.16	ENST00000548278.2	1858	4	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_2	14.3527000944073	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGTCACTTTTTTTCCC	113183222	True	NA	13	True	AATAGA	-18	NA	113185720	113192368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_113186022_113186184_113186317_113186682_113187049_113191309
transcript_49856.known	chr12	+	1898	3	FSM	ENSG00000139405.16	ENST00000552495.1	1898	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	104.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCATGAATGTCACTTT	113185417	False	NA	6	True	AATAGA	-11	NA	113185541	113192361	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_113186022_113186682_113187049_113191309
transcript_4986.known	chr1	+	768	2	FSM	ENSG00000142669.15	ENST00000319041.6	768	2	0	0	0	0	multi-exon	FALSE	canonical	3	2676	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAAAGGCCCCGCAGTCC	26270912	True	NA	-43	True	NA	NA	NA	26280121	26281450	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26280204_26280764
transcript_49862.known	chr12	+	5345	29	FSM	ENSG00000186815.13	ENST00000550785.5	5345	29	0	0	0	0	multi-exon	TRUE	canonical	3	56	junction_1	14.7074793550626	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTGCTGCCTCTTGAC	113219050	True	NA	14	True	ACTAAA	-20	NA	113221459	113298585	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_113221627_113225243_113225337_113226727_113226965_113260367_113260493_113266179_113266357_113267842_113267957_113268741_113268873_113269756_113269846_113272657_113272693_113273231_113273291_113273568_113273669_113276918_113277036_113277239_113277365_113278188_113278238_113278771_113278836_113280150_113280196_113284580_113284638_113284717_113284772_113285888_113285962_113286986_113287095_113288162_113288235_113288757_113288848_113290127_113290244_113290951_113290999_113291608_113291678_113291873_113291959_113292933_113293074_113293268_113293350_113295959
transcript_4987.known	chr1	+	467	2	FSM	ENSG00000169442.9	ENST00000374213.3	467	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGGTCCTGCTTGTGGTT	26317752	True	NA	7	True	AATAAA	-19	NA	26317957	26320523	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26318072_26320170
transcript_49880.known	chr12	+	5248	28	FSM	ENSG00000186815.13	ENST00000335509.11	5248	28	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	15.4872397584617	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTGCTGCCTCTTGAC	113219054	True	NA	14	True	ACTAAA	-20	NA	113221463	113298585	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_113221627_113226727_113226965_113260367_113260493_113266179_113266357_113267842_113267957_113268741_113268873_113269756_113269846_113272657_113272693_113273231_113273291_113273568_113273669_113276918_113277036_113277239_113277365_113278188_113278238_113278771_113278836_113280150_113280196_113284580_113284638_113284717_113284772_113285888_113285962_113286986_113287095_113288162_113288235_113288757_113288848_113290127_113290244_113290951_113290999_113291608_113291678_113291873_113291959_113292933_113293074_113293268_113293350_113295959
transcript_49900.known	chr12	-	1369	3	FSM	ENSG00000166578.10	ENST00000299732.6	1369	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAACGCTCTACGAATAAA	-113220882	True	NA	-3	True	AATAAA	-28	NA	113221094	113195440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_113195890_113207437_113208260_113220996
transcript_49902.known	chr12	-	3510	16	FSM	ENSG00000089060.12	ENST00000680972.1	3510	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_11	23.6943500063248	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTAGAGAAAATGACACCC	-113333760	True	NA	-16	True	AATAAA	-20	NA	113335109	113298770	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_113299975_113304320_113304386_113306494_113306576_113307690_113307845_113310233_113310356_113315334_113315477_113316525_113316657_113316941_113317002_113318963_113319072_113320330_113320499_113320580_113320687_113320849_113320908_113321055_113321109_113321195_113321349_113332722_113332961_113334442
transcript_49903.known	chr12	-	2975	16	FSM	ENSG00000089060.12	ENST00000202831.7	2975	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_11	28.7443907571547	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGAAAATGACACCCCCAA	-113333771	True	NA	-12	True	AATAAA	-24	NA	113335120	113298766	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_113299975_113304320_113304386_113306494_113306576_113307690_113307845_113310233_113310356_113315334_113315477_113316525_113316657_113316941_113317002_113318963_113319072_113320330_113320499_113320580_113320687_113320849_113320908_113321055_113321109_113321195_113321349_113332722_113332961_113334992
transcript_49904.nic	chr12	-	3550	16	NIC	ENSG00000089060.12	novel	3510	16	NA	NA	-32	0	intron_retention	FALSE	non_canonical	0	0	junction_11	27.46440120107	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTAGAGAAAATGACACCC	-113333826	False	NA	-16	True	AATAAA	-20	NA	113335175	113298770	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_113299975_113304320_113304386_113306494_113306576_113307690_113307845_113310233_113310356_113315334_113315477_113316525_113316657_113316941_113317002_113318963_113319072_113320330_113320499_113320580_113320687_113320849_113320908_113321055_113321109_113321195_113321349_113332748_113332961_113334442
transcript_49913.nic	chr12	-	3408	15	NIC	ENSG00000089060.12	novel	3510	16	NA	NA	-32	0	intron_retention	FALSE	non_canonical	0	0	junction_10	28.6456179645584	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTAGAGAAAATGACACCC	-113333826	False	NA	-16	True	AATAAA	-20	NA	113335175	113298770	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_113299975_113304320_113304386_113306494_113306576_113307690_113307845_113310233_113310356_113315334_113315477_113316525_113316657_113316941_113317002_113318963_113319072_113320580_113320687_113320849_113320908_113321055_113321109_113321195_113321349_113332722_113332961_113334442
transcript_49925.known	chr12	+	4787	12	FSM	ENSG00000151176.8	ENST00000280800.5	4787	12	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_4	13.2071856224601	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGTTTTATCTTATTT	113354673	True	NA	14	True	AATAAA	-31	NA	113358586	113391629	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_113358891_113369115_113369210_113372648_113372808_113374473_113374575_113374792_113375008_113380744_113380843_113384104_113384266_113384850_113384947_113385211_113385284_113386936_113387090_113387743_113387907_113388458
transcript_49926.known	chr12	+	2321	11	FSM	ENSG00000151176.8	ENST00000545182.6	2321	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	58.7885192873575	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTCCATGTCAGGCAGAG	113354652	True	NA	NA	False	NA	NA	NA	113358565	113389238	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_113358891_113369115_113369210_113372648_113372808_113374473_113374575_113374792_113375008_113380744_113380843_113384104_113384266_113385211_113385284_113386936_113387090_113387743_113387907_113388458
transcript_49931.known	chr12	+	1306	8	FSM	ENSG00000139410.15	ENST00000403593.9	1306	8	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_4	3.35638289270592	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCGAATGCTATGGATC	113422315	True	NA	3	True	AATAAA	-16	NA	113422379	113438276	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_113422478_113427961_113428157_113428419_113428460_113429159_113429300_113434133_113434223_113435328_113435557_113436750_113436876_113437885
transcript_49937.known	chr12	-	2739	5	FSM	ENSG00000089116.4	ENST00000261731.4	2739	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.433012701892219	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTGTGTGGTTTTCTTTT	-113471738	True	NA	1	True	AATAAA	-21	NA	113471871	113462032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_113463558_113467255_113467422_113468126_113468405_113469121_113469346_113471325
transcript_49938.known	chr12	-	3402	3	FSM	ENSG00000249550.8	ENST00000655514.1	3402	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	2.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACTTCCACAAGATTCAGA	NA	False	NA	NA	False	AATAAA	-9	NA	113773726	113743439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_113746596_113767074_113767209_113773614
transcript_49944.known	chr12	-	4422	25	FSM	ENSG00000122965.11	ENST00000545145.6	4422	25	0	0	0	0	multi-exon	TRUE	canonical	3	95	junction_1	60.8791921896691	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGCTTGCATAATAATAAT	-113957334	True	NA	NA	False	AATAAA	-11	NA	113966306	113816741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_113818187_113823208_113823322_113844667_113844789_113858790_113858897_113914968_113915086_113918391_113918448_113920610_113920691_113924696_113924758_113927053_113927230_113937006_113937137_113939959_113940161_113942323_113942435_113945827_113945925_113946353_113946476_113947333_113947465_113948832_113949037_113950082_113950155_113952511_113952591_113955130_113955212_113957781_113958051_113959211_113959405_113959864_113959904_113960058_113960179_113962231_113962415_113966191
transcript_49946.known	chr12	-	3574	25	FSM	ENSG00000122965.11	ENST00000392561.7	3574	25	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	63.3544783780559	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTTTCTTCTTCATT	-113957338	True	NA	-1	True	AGTAAA	-25	NA	113966310	113822053	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_113822647_113823208_113823322_113844667_113844789_113858790_113858897_113914968_113915086_113918391_113918448_113920610_113920691_113924696_113924758_113927053_113927230_113937006_113937137_113939959_113940161_113942323_113942435_113945827_113945925_113946353_113946476_113947333_113947465_113948832_113949037_113950082_113950155_113952511_113952591_113955130_113955212_113957781_113958051_113959211_113959405_113959864_113959904_113960058_113960179_113962231_113962415_113966191
transcript_49950.known	chr12	-	4148	24	FSM	ENSG00000122965.11	ENST00000261741.10	4148	24	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_14	29.5597821090833	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTTTGTTTTCTTCTTC	-113957353	True	NA	-4	True	AGTAAA	-22	NA	113966325	113822056	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_113823322_113844667_113844789_113858790_113858897_113914968_113915086_113918391_113918448_113920610_113920691_113924696_113924758_113927053_113927230_113937006_113937137_113939959_113940161_113942323_113942435_113945827_113945925_113946353_113946476_113947333_113947465_113948832_113949037_113950082_113950155_113952511_113952591_113955130_113955212_113957781_113958051_113959211_113959405_113959864_113959904_113960058_113960179_113962231_113962415_113966191
transcript_49959.nic	chr12	-	2329	17	ISM	ENSG00000122965.11	ENST00000261741.10	4148	24	-68	105078	-68	-12166	5prime_fragment	FALSE	canonical	3	305	junction_7	28.1079809618194	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGAAGAGAGCCTCCC	NA	False	NA	-7	True	NA	NA	NA	113966393	113927134	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_113927230_113937006_113937137_113939959_113940161_113942323_113942435_113945827_113945925_113946353_113946476_113947333_113947465_113948832_113949037_113950082_113950155_113952511_113952591_113955130_113955212_113957781_113958051_113959211_113959405_113959864_113959904_113960058_113960179_113962231_113962415_113966191
transcript_49965.nic	chr12	-	497	3	ISM	ENSG00000122965.11	ENST00000261741.10	4148	24	-68	138010	-68	-2204	5prime_fragment	FALSE	canonical	3	387	junction_1	6	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGAAAGTATGTAAAGGG	NA	False	NA	NA	False	NA	NA	NA	113966393	113960066	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_113960179_113962231_113962415_113966191
transcript_49966.known	chr12	-	4733	7	FSM	ENSG00000135111.16	ENST00000349155.7	4733	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.3094010767585	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGCCTTGTGTTAAATG	-114684054	True	NA	-1	True	AATAAA	-17	NA	114684175	114670254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_114672303_114674164_114674836_114676312_114676471_114677579_114677657_114679504_114679652_114680878_114681147_114682811
transcript_49975.known	chr12	-	8426	5	FSM	ENSG00000111412.6	ENST00000261318.5	8426	5	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_3	20.7906228862918	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCTCCTGTTAGATTGAT	-116732928	True	NA	NA	False	AATAAA	-36	NA	116738069	116710170	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_116717894_116719762_116719877_116720295_116720448_116723066_116723224_116737789
transcript_49979.known	chr12	-	1371	4	FSM	ENSG00000111412.6	ENST00000547630.1	1371	4	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_3	90.4224652518511	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTGGTAGTCGAATGTG	-116732929	True	NA	NA	False	NA	NA	NA	116738070	116717069	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_116717894_116719762_116719877_116720295_116720448_116737789
transcript_49990.known	chr12	-	492	2	FSM	ENSG00000111412.6	ENST00000547606.1	492	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCTTTCACTGTAAAATT	-116732695	False	NA	NA	False	NA	NA	NA	116737836	116717448	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_116717894_116737789
transcript_49995.known	chr12	+	2211	12	FSM	ENSG00000135119.15	ENST00000392549.7	2211	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	14.7614642378824	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGAGCCATGCCTGTTA	116734416	True	NA	11	True	AATAAA	-23	NA	116738290	116852944	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_116738371_116740344_116740522_116741035_116741095_116749840_116750308_116753983_116754061_116766813_116766915_116779194_116779349_116833791_116833942_116835959_116836026_116836180_116836283_116849313_116849485_116852337
transcript_5.known	ERCC-00013	+	792	1	FSM	ERCC-00013A	EF011062	792	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	792	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00013_+_0_800
transcript_50.known	ERCC-00137	+	521	1	FSM	ERCC-00137A	DQ855000	521	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00137_+_0_500
transcript_50001.nnic	chr12	+	3264	12	NNC	ENSG00000135119.15	novel	2211	12	NA	NA	0	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	14.7614642378824	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTCTAACACTGCAAAGAG	116734416	True	NA	-5	True	AATAAA	-7	NA	116738290	116852928	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_116738371_116740344_116740522_116741035_116741095_116749840_116750308_116753983_116754061_116766813_116766915_116779194_116779349_116833791_116833942_116835959_116836026_116836180_116836283_116849313_116849900_116851683
transcript_50013.nic	chr12	+	1262	7	ISM	ENSG00000135119.15	ENST00000392549.7	2211	12	0	73449	0	-31025	5prime_fragment	FALSE	canonical	3	33	junction_4	3.54729944229879	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACCTCTTCTAATTCCAC	116734416	True	NA	NA	False	AATAAA	-28	NA	116738290	116779495	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_116738371_116740344_116740522_116741035_116741095_116749840_116750308_116753983_116754061_116766813_116766915_116779194
transcript_50014.nic	chr12	+	2451	7	ISM	ENSG00000135119.15	ENST00000392549.7	2211	12	0	72260	0	-29836	5prime_fragment	FALSE	canonical	3	33	junction_4	3.54729944229879	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATGTGGAGAAGAAAGGC	116734416	True	NA	NA	False	CATAAA	-18	NA	116738290	116780684	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_116738371_116740344_116740522_116741035_116741095_116749840_116750308_116753983_116754061_116766813_116766915_116779194
transcript_50024.known	chr12	+	2415	11	FSM	ENSG00000135119.15	ENST00000407967.7	2415	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	14.3892320851392	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTGTGGTCTTGAT	116734416	True	NA	25	True	AATAAA	-19	NA	116738290	116853631	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_116738371_116740344_116740522_116741035_116741095_116749840_116750308_116753983_116754061_116766813_116766915_116779194_116779349_116833791_116833942_116835959_116836026_116836180_116836283_116852649
transcript_50025.known	chr12	-	5789	2	FSM	ENSG00000135116.9	ENST00000257572.5	5789	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAAGACATTTGTGTTTT	-116881425	False	NA	-7	True	ATTAAA	-21	NA	116881441	116856143	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_116861467_116880975
transcript_50032.known	chr12	+	4861	11	FSM	ENSG00000174989.13	ENST00000652555.1	4861	11	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	25.2128935269239	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGGTCAAGTTATTTT	116908896	True	NA	17	True	ATTAAA	-14	NA	116910949	117031148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_116911356_116928022_116928128_116945363_116945529_116949617_116949707_116964696_116964855_116985205_116985403_116988662_116988870_117010322_117010451_117024146_117024321_117027393_117027505_117028027
transcript_50038.known	chr12	+	4648	11	FSM	ENSG00000174989.13	ENST00000455858.2	4648	11	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	16.6324983090334	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGGTCAAGTTATTTT	116908911	True	NA	17	True	ATTAAA	-14	NA	116910964	117031148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_116911158_116928022_116928128_116945363_116945529_116949617_116949707_116964696_116964855_116985205_116985403_116988662_116988870_117010322_117010451_117024146_117024321_117027393_117027505_117028027
transcript_50050.known	chr12	-	1057	8	FSM	ENSG00000088992.18	ENST00000470612.5	1057	8	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_3	22.7335946680373	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCTCTGTCAGTTCCT	-117098102	True	NA	2	True	AATAAA	-26	NA	117099479	117038922	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_117039211_117041946_117041995_117046558_117046667_117046771_117046839_117049018_117049159_117056805_117056887_117075270_117075341_117099224
transcript_50053.known	chr12	-	936	7	FSM	ENSG00000088992.18	ENST00000541210.5	936	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	28.073811442141	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGGCCTCTGTCAGTTC	-117098069	True	NA	0	True	AATAAA	-24	NA	117099446	117038924	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_117039211_117041946_117041995_117046558_117046667_117046776_117046839_117049018_117049159_117075270_117075341_117099224
transcript_50055.nic	chr12	-	957	7	NIC	ENSG00000088992.18	novel	989	8	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	28.1627216172175	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCCAATAAAAAAAAAAAAAA	-117098089	True	NA	-32	True	NA	NA	NA	117099466	117038956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_117039211_117046558_117046667_117046776_117046839_117049018_117049159_117056805_117056887_117075270_117075341_117099224
transcript_50057.nic	chr12	-	1683	4	ISM	ENSG00000088992.18	ENST00000470612.5	1057	8	-18	8977	-18	898	5prime_fragment	FALSE	canonical	3	73	junction_2	5.90668171555645	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGGTGCTGCGTGCCTGT	-117098120	True	NA	-1	True	AATAAA	-16	NA	117099497	117047899	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_117049159_117056805_117056887_117075270_117075341_117099224
transcript_50067.known	chr12	-	5976	12	FSM	ENSG00000135108.16	ENST00000622495.5	5976	12	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_3	44.9763941758102	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGGCTCAAACACCATAG	-117179417	True	NA	-16	True	AATAAA	-17	NA	117190470	117141990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_117146278_117155790_117155949_117157872_117158064_117165484_117165618_117166897_117167078_117172470_117172608_117174204_117174342_117174650_117174798_117177519_117177642_117186476_117186572_117189226_117189363_117190217
transcript_50071.known	chr12	-	2906	12	FSM	ENSG00000135108.16	ENST00000330622.9	2906	12	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_3	97.6294224720776	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTTTTGAAGGGAAAAAAAG	-117179403	True	NA	44	True	AATGAA	-20	NA	117190456	117145067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_117146278_117155790_117155949_117157872_117158085_117165484_117165618_117166897_117167078_117172470_117172608_117174204_117174342_117174650_117174798_117177519_117177642_117186476_117186572_117189226_117189363_117190217
transcript_50080.known	chr12	-	2554	11	FSM	ENSG00000135108.16	ENST00000550180.5	2554	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	144.100659262892	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTTCACACCTCTTGTT	-117179233	False	NA	63	True	AAAAAG	-19	NA	117190286	117145048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_117146278_117155790_117155949_117157872_117158064_117165484_117165618_117172470_117172608_117174204_117174342_117174650_117174798_117177519_117177642_117186476_117186572_117189226_117189363_117190217
transcript_50097.known	chr12	-	4138	13	NNC	ENSG00000135108.16	novel	5976	12	NA	NA	-1	1268	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	138.117175494819	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCAAATGGCCTGCCCAAT	-117179418	True	NA	-6	True	AATAAA	-22	NA	117190471	117143780	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_117146278_117155790_117155949_117157872_117158064_117165484_117165618_117166897_117167078_117172470_117172608_117174204_117174342_117174650_117174798_117177519_117177642_117186476_117186572_117189226_117189363_117190217_117190278_117190326
transcript_5010.nnic	chr1	+	3412	5	NNC	ENSG00000131914.11	novel	3975	4	NA	NA	-85	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	692.718016223052	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATCCCCTTGTCAGAT	26273768	True	NA	81	True	AATAAA	-23	NA	26410731	26429722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_26410923_26411385_26411583_26425302_26425488_26426241_26428496_26429137
transcript_5011.nnic	chr1	+	3443	5	NNC	ENSG00000131914.11	novel	3975	4	NA	NA	-95	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	692.718016223052	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATCCCCTTGTCAGAT	26273758	True	NA	81	True	AATAAA	-23	NA	26410721	26429722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_26410923_26411385_26411583_26425302_26425488_26426241_26428517_26429137
transcript_50114.nic	chr12	+	2674	12	NIC	ENSG00000111445.14	novel	2104	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	36	junction_11	104.946188493622	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTTGAATGAGGTGT	118011043	True	NA	9	True	ATTAAA	-15	NA	118016702	118033130	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_118016893_118019071_118019137_118019631_118019769_118020905_118020986_118022285_118022360_118024850_118025011_118025746_118025829_118026888_118027019_118027952_118028031_118029770_118029826_118031181_118032619_118032944
transcript_50116.nic	chr12	+	2111	12	NIC	ENSG00000111445.14	novel	2449	12	NA	NA	0	-119	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	144.521381643223	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAAGTGACTCTTCCTTA	118011043	True	NA	17	True	AATAAA	-29	NA	118016702	118032115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_118016893_118017689_118017816_118019071_118019137_118019631_118019769_118020905_118020986_118022285_118022360_118024850_118025011_118025746_118025829_118026888_118027019_118027952_118028031_118029770_118029826_118031181
transcript_50117.nic	chr12	+	2230	12	NIC	ENSG00000111445.14	novel	2449	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	144.521381643223	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATGTCAAATTCTTAAA	118011043	True	NA	NA	False	AATAAA	-24	NA	118016702	118032234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_118016893_118017689_118017816_118019071_118019137_118019631_118019769_118020905_118020986_118022285_118022360_118024850_118025011_118025746_118025829_118026888_118027019_118027952_118028031_118029770_118029826_118031181
transcript_50120.known	chr12	+	2449	12	FSM	ENSG00000111445.14	ENST00000392542.6	2449	12	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_2	140.052764555021	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATGTCAAATTCTTAAA	118011062	True	NA	NA	False	AATAAA	-24	NA	118016721	118032234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_118016893_118017689_118018054_118019071_118019137_118019631_118019769_118020905_118020986_118022285_118022360_118024850_118025011_118025746_118025829_118026888_118027019_118027952_118028031_118029770_118029826_118031181
transcript_50126.known	chr12	+	2104	11	FSM	ENSG00000111445.14	ENST00000454402.7	2104	11	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_6	40.5344298097309	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATGTCAAATTCTTAAA	118011043	True	NA	NA	False	AATAAA	-24	NA	118016702	118032234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_118016893_118019071_118019137_118019631_118019769_118020905_118020986_118022285_118022360_118024850_118025011_118025746_118025829_118026888_118027019_118027952_118028031_118029770_118029826_118031181
transcript_5014.nnic	chr1	+	3555	5	NNC	ENSG00000131914.11	novel	3975	4	NA	NA	-147	3	at_least_one_novel_splicesite	TRUE	canonical	3	201	junction_4	605.958074044731	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATCCCCTTGTCAGAT	26410606	False	NA	81	True	AATAAA	-23	NA	26410669	26429722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_26410923_26411385_26411583_26425302_26425488_26426241_26428577_26429137
transcript_50144.known	chr12	-	2855	9	FSM	ENSG00000176871.9	ENST00000315436.8	2855	9	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_1	32.5921769754645	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTAGTGTGGTGCTGGTGTG	-118058226	True	NA	NA	False	AATAAA	-21	NA	118061179	118032686	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_118034359_118034985_118035094_118035213_118035325_118036337_118036511_118038287_118038389_118042840_118042973_118043132_118043378_118052309_118052479_118061035
transcript_50145.known	chr12	-	1353	9	FSM	ENSG00000176871.9	ENST00000441406.6	1353	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	145.746140600703	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATCTGGTCTTGCATTGA	-118062142	False	101	-65	True	NA	NA	NA	118062174	118034120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_118034359_118034985_118035094_118035213_118035325_118036337_118036511_118038287_118038389_118042840_118042973_118043132_118043378_118052309_118052479_118062098
transcript_5015.known	chr1	+	3458	5	FSM	ENSG00000131914.11	ENST00000254231.4	3458	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	692.718016223052	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTCATCCCCTTGTCA	26273853	True	NA	78	True	AATAAA	-20	NA	26410816	26429719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26410923_26411385_26411583_26425302_26425488_26426241_26428588_26429095
transcript_50152.known	chr12	-	1008	4	FSM	ENSG00000176871.9	ENST00000536602.5	1008	4	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_3	36.6696968444882	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTTTTCTCATCGGCACT	-118058159	True	NA	NA	False	NA	NA	NA	118061112	118042455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_118042973_118043132_118043378_118052309_118052479_118061035
transcript_50162.known	chr12	-	5009	9	FSM	ENSG00000176834.14	ENST00000359236.10	5009	9	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_8	11.4864050076601	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTTTGTGATCTTGATT	-118099454	True	NA	-17	True	AATAAA	-16	NA	118104011	118063592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_118066695_118068376_118068598_118071051_118071068_118071358_118071470_118073698_118073993_118079345_118079607_118082126_118082430_118095532_118095815_118103592
transcript_50183.known	chr12	-	694	4	FSM	ENSG00000176834.14	ENST00000539956.1	694	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	4.02768199119819	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGGAGTCTCGCACTGT	NA	False	NA	NA	False	NA	NA	NA	118136026	118117666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_118117883_118121500_118121619_118126480_118126671_118135856
transcript_50189.known	chr12	-	730	2	FSM	ENSG00000176834.14	ENST00000542195.1	730	2	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGAGTGTGACAAGCTGG	-118099433	True	NA	48	True	NA	NA	NA	118103990	118102838	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_118103171_118103592
transcript_50190.known	chr12	-	1865	2	FSM	ENSG00000176834.14	ENST00000612851.1	1865	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCTACTCTGTAAATAATA	-118099328	True	NA	-5	True	AATAAA	-18	NA	118103885	118101604	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_118103177_118103592
transcript_50191.known	chr12	+	1431	4	FSM	ENSG00000089220.5	ENST00000261313.3	1431	4	0	0	0	0	multi-exon	FALSE	canonical	3	5497	junction_2	227.453047657948	1462	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTGAGTCCCCGGATGT	118083316	True	NA	15	True	AATAAA	-19	NA	118136123	118145584	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_118136345_118138038_118138149_118139450_118139552_118144585
transcript_50200.known	chr12	-	4346	21	FSM	ENSG00000135090.14	ENST00000392533.8	4346	21	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	8.38137816829667	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCCTTGCTGTGTTATTGT	-118371993	True	NA	-3	True	AATAAA	-14	NA	118372907	118149800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_118151159_118152226_118152410_118160145_118160359_118161787_118162028_118172456_118172661_118177200_118177330_118181370_118181608_118189806_118189942_118199050_118199258_118201295_118201464_118212913_118212996_118214016_118214111_118233673_118233766_118235557_118235672_118238072_118238170_118239226_118239273_118243414_118243517_118244893_118244966_118255447_118255656_118266654_118266760_118372647
transcript_50203.nic	chr12	-	2188	16	ISM	ENSG00000135090.14	ENST00000392533.8	4346	21	-43	27403	-43	4238	5prime_fragment	FALSE	canonical	3	28	junction_1	4.74692883171144	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTAAGGATACCAATGTT	-118372036	True	NA	NA	False	AATAAA	-2	NA	118372950	118177203	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_118177330_118181370_118181608_118189806_118189942_118199050_118199258_118201295_118201464_118212913_118212996_118214016_118214111_118233673_118233766_118235557_118235672_118238072_118238170_118239226_118239273_118243414_118243517_118244893_118244966_118255447_118255656_118266654_118266760_118372647
transcript_50206.nic	chr12	-	1427	12	ISM	ENSG00000135090.14	ENST00000392533.8	4346	21	-43	51551	-43	70	5prime_fragment	FALSE	canonical	3	30	junction_5	4.09998992137443	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTTCCAAGAGACACGG	-118372036	True	NA	NA	False	AATGAA	-6	NA	118372950	118201351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_118201464_118212913_118212996_118214016_118214111_118233673_118233766_118235557_118235672_118238072_118238170_118239226_118239273_118243414_118243517_118244893_118244966_118255447_118255656_118266654_118266760_118372647
transcript_50208.known	chr12	+	879	1	FSM	ENSG00000240342.3	ENST00000488803.1	879	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGGTTTTTATACAAGAAA	118244889	False	NA	NA	False	NA	NA	NA	118246083	118246962	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_118246100_118247000
transcript_5021.known	chr1	+	3975	4	FSM	ENSG00000131914.11	ENST00000326279.11	3975	4	0	0	0	0	multi-exon	FALSE	canonical	3	1527	junction_3	59.4885609919158	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTTGTCAGATGTTTTT	26273853	True	NA	87	True	AATAAA	-29	NA	26410816	26429728	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26410923_26411385_26411583_26425302_26425488_26426241
transcript_50213.known	chr12	+	4724	12	FSM	ENSG00000111707.12	ENST00000543473.2	4724	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	303.110350033648	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTCATTTGGTGCATG	118360152	True	NA	10	True	AATAAA	-15	NA	118376554	118418033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_118376834_118380161_118380232_118384011_118384068_118386113_118386186_118389926_118389947_118391125_118391283_118400658_118400755_118401758_118401821_118401982_118402005_118403411_118403518_118411072_118411158_118414334
transcript_50221.nic	chr12	+	549	6	ISM	ENSG00000111707.12	ENST00000543473.2	4724	12	-32	26888	-32	-20002	5prime_fragment	FALSE	canonical	3	872	junction_5	73.7878038702874	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTACATTAAAGAAAAGAAGG	118360120	True	NA	-10	True	NA	NA	NA	118376522	118391145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_118376834_118380161_118380232_118384011_118384068_118386113_118386186_118389926_118389947_118391125
transcript_50222.nic	chr12	+	659	6	ISM	ENSG00000111707.12	ENST00000543473.2	4724	12	-44	26790	-44	-19904	5prime_fragment	FALSE	canonical	3	872	junction_5	73.7878038702874	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATTGAAAATGAAAAGCTG	118360108	True	NA	88	True	AAGAAA	-10	NA	118376510	118391243	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_118376834_118380161_118380232_118384011_118384068_118386113_118386186_118389926_118389947_118391125
transcript_50225.nic	chr12	+	451	4	ISM	ENSG00000111707.12	ENST00000543473.2	4724	12	-32	31906	-32	-25020	5prime_fragment	FALSE	canonical	3	941	junction_2	61.7377968148812	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATCAGAAGAGAATGAAAAA	118360120	True	NA	-2	True	NA	NA	NA	118376522	118386127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_118376834_118380161_118380232_118384011_118384068_118386113
transcript_50226.nic	chr12	+	615	3	ISM	ENSG00000111707.12	ENST00000543473.2	4724	12	-210	33966	-210	-27080	5prime_fragment	FALSE	canonical	3	941	junction_2	72	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGTGTGATTGAATCC	118376251	False	NA	NA	False	NA	NA	NA	118376344	118384067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_118376834_118380161_118380232_118384011
transcript_50228.known	chr12	+	8431	13	FSM	ENSG00000139767.10	ENST00000267260.5	8431	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.87082869338697	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGGCTCAGTGTTCTCT	118981358	True	NA	2	True	ATTAAA	-24	NA	118981540	119163051	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_118982014_119102235_119102383_119114277_119114365_119116936_119117009_119120249_119120277_119122069_119122121_119125380_119125480_119130677_119130835_119145380_119145686_119151016_119151221_119153538_119153650_119154242_119154384_119156494
transcript_50232.known	chr12	+	1861	3	FSM	ENSG00000152137.8	ENST00000281938.7	1861	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTGTGGTTCTTTTAA	119178876	True	NA	NA	False	AATAAA	-17	NA	119178930	119194746	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_119179680_119187024_119187089_119193698
transcript_50233.known	chr12	+	886	3	FSM	ENSG00000183273.7	ENST00000536742.5	886	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTTGACTTTTCCATCC	119334648	True	NA	NA	False	ATTAAA	-23	NA	119334711	119433636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_119335267_119428682_119428763_119433385
transcript_50234.known	chr12	+	2303	8	FSM	ENSG00000111725.11	ENST00000541640.5	2303	8	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_1	74.0510028318872	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCCTGGAGGAGCTCT	119664588	True	NA	NA	False	AATAAA	-21	NA	119667863	119681624	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_119668046_119668235_119668404_119672300_119672465_119673963_119674058_119674339_119674455_119676536_119676671_119679932_119680002_119680247
transcript_50236.nic	chr12	+	2646	8	NIC	ENSG00000111725.11	novel	2219	7	NA	NA	16	0	intron_retention	FALSE	canonical	3	12	junction_1	103.02902305582	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGACATGTGCCTGGAGGA	119664604	True	NA	NA	False	AATAAA	-16	NA	119667879	119681619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_119668404_119671494_119671669_119672300_119672465_119673963_119674058_119674339_119674455_119676536_119676671_119679932_119680002_119680247
transcript_50237.known	chr12	+	2219	7	FSM	ENSG00000111725.11	ENST00000229328.10	2219	7	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_5	17.763883459299	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGACATGTGCCTGGAGGA	119668061	False	NA	NA	False	AATAAA	-16	NA	119668132	119681619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_119668404_119672300_119672465_119673963_119674058_119674339_119674455_119676536_119676671_119679932_119680002_119680247
transcript_50244.known	chr12	-	8736	48	FSM	ENSG00000122966.17	ENST00000392521.7	8736	48	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_43	17.6822464052427	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGCTTTAGTGCAATGA	-119874764	True	NA	0	True	AATAAA	-18	NA	119877320	119685790	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_119688256_119690150_119690455_119697658_119697839_119697975_119698055_119700744_119700826_119701623_119701753_119701849_119701959_119704362_119704456_119708178_119708319_119710250_119710387_119710539_119710621_119712177_119712348_119712590_119712696_119713202_119713295_119713467_119713649_119714196_119714335_119718244_119718410_119718698_119718862_119720477_119720586_119721308_119721450_119728501_119728607_119730494_119730631_119734163_119734358_119735159_119735358_119742410_119742465_119752049_119752248_119757370_119757546_119758590_119758701_119760938_119761056_119767086_119767183_119770784_119770911_119772769_119772911_119775785_119775840_119776357_119776409_119776671_119776843_119782517_119782638_119783907_119784052_119784959_119785066_119803205_119803390_119822819_119822974_119825164_119825369_119832770_119832865_119834085_119834229_119850173_119850276_119857522_119857699_119869059_119869202_119876072_119876182_119877248
transcript_50255.known	chr12	-	2449	7	FSM	ENSG00000111737.12	ENST00000544304.5	2449	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	62.5779513886481	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCTTTCCCTGAGGTTT	NA	False	NA	-1	True	ATTAAA	-13	NA	120117502	120096365	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120097374_120098810_120098936_120099029_120099155_120103825_120103950_120108416_120108468_120108591_120108704_120116598
transcript_50259.known	chr12	-	2855	6	FSM	ENSG00000111737.12	ENST00000229340.10	2855	6	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_2	13.0169120762184	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTCCAGGGTCTGTTT	-120110905	True	NA	-13	True	AATAAA	-17	NA	120116753	120095098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120097374_120098810_120098936_120099029_120099155_120103825_120103950_120108416_120108468_120116598
transcript_50265.known	chr12	-	939	5	FSM	ENSG00000111737.12	ENST00000534951.5	939	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	61.0629797831714	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGATGCCAGCCTGCTG	-120110919	True	NA	NA	False	NA	NA	NA	120116767	120096903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120097374_120099029_120099155_120103825_120103950_120108416_120108468_120116598
transcript_50267.known	chr12	+	2094	1	FSM	ENSG00000277283.1	ENST00000611079.1	2094	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGACTTTGCCTGCATGT	120116634	True	NA	14	True	AATAAA	-26	NA	120116906	120119000	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_120116900_120119000
transcript_50268.known	chr12	-	8681	58	FSM	ENSG00000089154.11	ENST00000300648.7	8681	58	0	0	0	0	multi-exon	FALSE	canonical	2	187	junction_51	120.115590168549	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGTACCTGTTTTTGTA	-120194702	False	363403	16	True	ATTAAA	-32	NA	120194715	120127201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120127975_120129275_120129495_120130645_120130754_120131184_120131334_120131925_120132023_120134290_120134406_120134532_120134727_120136501_120136733_120137205_120137320_120137544_120137815_120137900_120138045_120138322_120138416_120138694_120138857_120140858_120141024_120142506_120142723_120142823_120142942_120144305_120144449_120144638_120144836_120144922_120145062_120145261_120145331_120147051_120147273_120148166_120148347_120149605_120149721_120149921_120150044_120151144_120151392_120153212_120153408_120153743_120153910_120154969_120155041_120155240_120155431_120155591_120155720_120156460_120156605_120156911_120156993_120157848_120158031_120158459_120158616_120159824_120160024_120160141_120160256_120161489_120161584_120161879_120162059_120162846_120162972_120163069_120163260_120164335_120164496_120164645_120164722_120168207_120168301_120170168_120170322_120173652_120173827_120174070_120174170_120175161_120175213_120175745_120175875_120176142_120176218_120177446_120177556_120177683_120177753_120178624_120178760_120178851_120178951_120183568_120183678_120184111_120184244_120184823_120184888_120190297_120190401_120194679
transcript_50269.nic	chr12	-	2412	22	ISM	ENSG00000089154.11	ENST00000300648.7	8681	58	-12	34342	-12	-3084	5prime_fragment	FALSE	canonical	2	187	junction_15	40.2493926096056	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAACAAAGCTTATTCCTT	-120194714	False	363403	-57	True	CATAAA	-20	NA	120194727	120161543	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_120161584_120161879_120162059_120162846_120162972_120163069_120163260_120164335_120164496_120164645_120164722_120168207_120168301_120170168_120170322_120173652_120173827_120174070_120174170_120175161_120175213_120175745_120175875_120176142_120176218_120177446_120177556_120177683_120177753_120178624_120178760_120178851_120178951_120183568_120183678_120184111_120184244_120184823_120184888_120190297_120190401_120194679
transcript_50281.known	chr12	-	993	8	FSM	ENSG00000089157.16	ENST00000546989.5	993	8	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_3	8306.22807148408	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGGACTCTTAATTTT	-119837707	True	NA	-22	True	AATAAA	-19	NA	120201110	120196701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120196935_120197321_120197463_120198553_120198632_120198853_120199001_120199117_120199206_120199309_120199486_120200729_120200832_120201082
transcript_50286.known	chr12	-	1106	8	FSM	ENSG00000089157.16	ENST00000549098.5	1106	8	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_6	8232.53952933363	10079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAGTCTCTGGACTCTT	-119837707	True	NA	-28	True	AATAAA	-13	NA	120201110	120196707	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120196935_120197321_120197463_120198553_120198740_120198853_120199001_120199117_120199206_120199309_120199486_120200718_120200832_120201082
transcript_50287.known	chr12	-	1257	8	FSM	ENSG00000089157.16	ENST00000228306.8	1257	8	0	0	0	0	multi-exon	FALSE	canonical	3	1072	junction_7	7723.53932297036	1457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTCTCTGGACTCTTA	-120201182	False	29	-27	True	AATAAA	-14	NA	120201211	120196706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120196935_120197321_120197463_120198553_120198740_120198853_120199001_120199117_120199206_120199309_120199486_120200729_120200892_120201082
transcript_50289.known	chr12	-	966	8	FSM	ENSG00000089157.16	ENST00000551258.5	966	8	0	0	0	0	multi-exon	FALSE	canonical	3	1411	junction_3	7901.82862587218	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGTCGGACGAGGATATG	-119837694	True	NA	-134	True	NA	NA	NA	120201097	120196813	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120196935_120197321_120197463_120198553_120198771_120198894_120199001_120199117_120199206_120199309_120199486_120200729_120200832_120201082
transcript_50299.known	chr12	-	912	7	FSM	ENSG00000089157.16	ENST00000313104.9	912	7	0	0	0	0	multi-exon	FALSE	canonical	3	442	junction_2	8441.68654982851	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGGACTCTTAATTTT	-119837704	True	NA	-22	True	AATAAA	-19	NA	120201107	120196701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120196935_120197321_120197463_120198853_120199001_120199117_120199206_120199309_120199486_120200729_120200832_120201082
transcript_5030.known	chr1	+	3245	9	FSM	ENSG00000117682.17	ENST00000360009.6	3245	9	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_8	55.3634299425171	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGATGTAAAACTTGTTTG	26428061	True	NA	10	True	AATAGA	-15	NA	26432354	26471294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26432377_26432890_26433009_26438167_26438285_26442730_26442874_26446315_26446433_26447558_26447661_26457790_26457906_26460036_26460145_26468891
transcript_50319.known	chr12	-	1344	7	FSM	ENSG00000089157.16	ENST00000551150.5	1344	7	0	0	0	0	multi-exon	FALSE	canonical	3	21453	junction_5	950.899574087611	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGACTCTTAATTTTGTA	-119837696	True	NA	-19	True	AATAAA	-22	NA	120201099	120196698	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120196935_120197321_120197463_120198553_120198740_120198853_120199001_120199117_120199206_120199309_120199486_120200729
transcript_50320.known	chr12	-	2591	6	FSM	ENSG00000089157.16	ENST00000552461.5	2591	6	0	0	0	0	multi-exon	FALSE	canonical	3	21453	junction_5	1031.85685053693	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTCTCTGGACTCTTA	-119837707	True	NA	-27	True	AATAAA	-14	NA	120201110	120196706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120196935_120197321_120197463_120198553_120198740_120198853_120199001_120199117_120199206_120199309
transcript_50332.known	chr12	-	3785	12	FSM	ENSG00000089159.17	ENST00000228307.11	3785	12	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_6	268.721829198157	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTAGTGCTATTTCT	-120256502	True	NA	-6	True	AATAAA	-19	NA	120265771	120210446	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120212581_120213841_120213991_120214135_120214218_120214824_120214999_120215102_120215274_120215559_120215662_120221622_120221759_120222548_120222751_120222862_120223000_120223717_120223834_120224150_120224378_120265616
transcript_50337.nic	chr12	-	4449	12	NIC	ENSG00000089159.17	novel	5457	14	NA	NA	-14	0	intron_retention	FALSE	canonical	3	70	junction_10	284.865460487073	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCTGTGCTAGTGCTAT	-120256516	True	NA	-10	True	AATAAA	-15	NA	120265785	120210450	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_120212581_120213841_120213991_120214135_120214218_120214824_120214999_120215102_120215274_120221622_120221759_120222548_120222751_120222862_120223000_120223717_120223834_120224150_120224378_120226361_120227118_120265616
transcript_50339.nic	chr12	-	3950	12	NIC	ENSG00000089159.17	novel	5457	14	NA	NA	-25	0	intron_retention	FALSE	canonical	3	51	junction_5	288.978794726625	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCTGTGCTAGTGCTAT	-120256527	True	NA	-10	True	AATAAA	-15	NA	120265796	120210450	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_120212581_120213841_120213991_120214135_120214218_120214824_120214999_120215102_120215418_120215559_120215662_120221622_120221759_120222548_120222751_120222862_120223000_120223717_120223834_120224150_120224378_120265616
transcript_5035.nic	chr1	+	3271	9	NIC	ENSG00000117682.17	novel	3338	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	64.6601693471336	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGATGTAAAACTTGTTTG	26428071	True	NA	10	True	AATAGA	-15	NA	26432364	26471294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_26432416_26432890_26433009_26438167_26438285_26442730_26442874_26446315_26446433_26447558_26447661_26457790_26457906_26460036_26460145_26468894
transcript_50353.known	chr12	-	3683	11	FSM	ENSG00000089159.17	ENST00000424649.6	3683	11	0	0	0	0	multi-exon	FALSE	canonical	3	520	junction_5	101.323491846659	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTAGTGCTATTTCT	-120256502	True	NA	-6	True	AATAAA	-19	NA	120265771	120210446	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120212581_120213841_120213991_120214135_120214218_120214824_120214999_120215102_120215274_120221622_120221759_120222548_120222751_120222862_120223000_120223717_120223834_120224150_120224378_120265616
transcript_50356.known	chr12	-	3835	11	FSM	ENSG00000089159.17	ENST00000267257.11	3835	11	0	0	0	0	multi-exon	TRUE	canonical	3	49	junction_5	237.825650424844	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTATTTCTTGGTGGTC	-120256502	True	NA	2	True	AATAAA	-27	NA	120265771	120210438	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120212581_120213841_120213991_120214135_120214218_120214824_120214999_120215102_120215418_120221622_120221759_120222548_120222751_120222862_120223000_120223717_120223834_120224150_120224378_120265616
transcript_5038.nic	chr1	+	3374	9	NIC	ENSG00000117682.17	novel	3338	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	57.6319139019346	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGATGTAAAACTTGTTTG	26428071	True	NA	10	True	AATAGA	-15	NA	26432364	26471294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_26432519_26432890_26433009_26438167_26438285_26442730_26442874_26446315_26446433_26447558_26447661_26457790_26457906_26460036_26460145_26468894
transcript_50382.known	chr12	+	1170	5	FSM	ENSG00000255857.7	ENST00000535200.2	1199	5	29	0	-1	0	multi-exon	FALSE	canonical	3	17	junction_4	87.7624635023425	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCAAGGGAGGCGGATC	120199265	True	NA	NA	False	NA	NA	NA	120201370	120213138	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_120201427_120206544_120206622_120209838_120209935_120210929_120211107_120212374
transcript_50390.known	chr12	+	707	4	FSM	ENSG00000255857.7	ENST00000542314.6	780	4	36	37	2	-37	multi-exon	FALSE	canonical	3	26	junction_3	82.174610839764	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAGAAAAAATAAAATCAAA	120199221	True	NA	-29	True	CATAAA	-42	NA	120201326	120210519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_120201427_120206544_120206622_120209838_120209935_120210085
transcript_50391.known	chr12	+	2525	4	FSM	ENSG00000255857.7	ENST00000667017.1	2525	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	79.3767388260986	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTACTGAAAATACAAAAAA	120199250	True	NA	NA	False	NA	NA	NA	120201355	120213210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_120201427_120206544_120206622_120209838_120209935_120210929
transcript_50395.known	chr12	+	1166	4	FSM	ENSG00000255857.7	ENST00000542265.7	1183	4	17	0	0	0	multi-exon	FALSE	canonical	3	142	junction_3	29.1471363182656	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCAGGCATGGGGGCGTG	120199185	True	NA	NA	False	AATACA	-7	NA	120201290	120213231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_120201427_120206544_120206622_120209838_120209935_120212374
transcript_50396.known	chr12	+	716	4	FSM	ENSG00000255857.7	ENST00000667721.2	748	4	26	6	-6	-4	multi-exon	FALSE	canonical	2	5	junction_2	86.3288287113098	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGATGGGGGTCTCACTA	120199260	True	NA	10	True	AATAAA	-10	NA	120201365	120212765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_120201427_120206544_120206713_120209838_120209935_120212374
transcript_504.nic	chr1	-	2090	7	NIC	ENSG00000160087.21	novel	2260	7	NA	NA	4	84	combination_of_known_junctions	FALSE	canonical	3	24	junction_6	204.058542798112	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGATGTGGTCACTTAGAA	-1264097	True	NA	-37	True	AGTAAA	-17	NA	1273860	1254900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_1255488_1256044_1256126_1256991_1257131_1257207_1257311_1263345_1263387_1267861_1267993_1272852
transcript_50403.known	chr12	+	1217	4	FSM	ENSG00000089163.4	ENST00000202967.4	1217	4	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_2	4.78423336480244	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCATGAATTTGTGTGT	120302168	True	NA	21	True	AATAAA	-24	NA	120302320	120313249	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_120302379_120303560_120304059_120312455_120312751_120312883
transcript_50408.nnic	chr12	-	3006	15	NNC	ENSG00000135097.7	novel	2959	15	NA	NA	-80	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_3	28.8461789638823	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCTTGTGAATGTCTT	-120365274	True	NA	-6	True	AATAAA	-16	NA	120369244	120341329	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_120343106_120345569_120345633_120346134_120346290_120347445_120347515_120351343_120351401_120353298_120353380_120356901_120357020_120357815_120357899_120359004_120359054_120363042_120363136_120364713_120364756_120368007_120368093_120368191_120368274_120368832_120368874_120369032
transcript_50409.known	chr12	-	2959	15	FSM	ENSG00000135097.7	ENST00000257552.7	2959	15	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	23.1203594350988	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCTTGTGAATGTCTT	-120365194	True	NA	-6	True	AATAAA	-16	NA	120369164	120341329	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120343106_120345569_120345633_120346134_120346323_120347445_120347515_120351343_120351401_120353298_120353380_120356901_120357020_120357815_120357899_120359004_120359054_120363042_120363136_120364713_120364756_120368007_120368093_120368191_120368274_120368832_120368874_120369032
transcript_50411.nnic	chr12	-	2713	15	NNC	ENSG00000135097.7	novel	2959	15	NA	NA	-80	-293	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_3	28.8461789638823	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGGTTTTTATTTTTAA	-120365274	True	NA	32	True	AATAAA	-15	NA	120369244	120341622	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_120343106_120345569_120345633_120346134_120346290_120347445_120347515_120351343_120351401_120353298_120353380_120356901_120357020_120357815_120357899_120359004_120359054_120363042_120363136_120364713_120364756_120368007_120368093_120368191_120368274_120368832_120368874_120369032
transcript_50416.nic	chr12	-	2982	14	NIC	ENSG00000135097.7	novel	2959	15	NA	NA	-80	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	35.8728853777535	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCTTGTGAATGTCTT	-120365274	True	NA	-6	True	AATAAA	-16	NA	120369244	120341329	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_120343106_120345569_120345633_120346134_120346323_120347445_120347515_120353298_120353380_120356901_120357020_120357815_120357899_120359004_120359054_120363042_120363136_120364713_120364756_120368007_120368093_120368191_120368274_120368832_120368874_120369032
transcript_5042.known	chr1	+	1235	8	FSM	ENSG00000117682.17	ENST00000525682.6	1235	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	62.9940068415971	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGGGTTTGGAGAGCAAAG	26428045	True	NA	2	True	ACTAAA	-18	NA	26432338	26469373	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26432377_26432890_26433009_26438167_26438285_26442730_26442874_26446315_26446433_26457790_26457906_26460036_26460145_26468894
transcript_50435.known	chr12	+	552	5	FSM	ENSG00000111780.8	ENST00000551806.1	552	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	4612.06598906607	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACAGTATTTTTTTACTG	120396150	True	NA	-15	True	NA	NA	NA	120438197	120460006	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_120438230_120438378_120438522_120446656_120446830_120457075_120457180_120459906
transcript_50437.known	chr12	+	931	5	FSM	ENSG00000257218.6	ENST00000548171.1	931	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	112.665433918305	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATTTTTAGTTGCCAT	120442224	True	NA	NA	False	NA	NA	NA	120446443	120460344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_120446562_120446656_120446830_120454932_120455031_120457075_120457180_120459906
transcript_50472.known	chr12	+	4238	4	FSM	ENSG00000257218.6	ENST00000551765.6	4238	4	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_2	36.6090456338624	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTACCATGAATGCATACTT	120442224	True	NA	NA	False	AATAAA	-18	NA	120446443	120463749	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_120446562_120446656_120446830_120457075_120457180_120459906
transcript_50480.known	chr12	-	1152	4	FSM	ENSG00000111786.9	ENST00000229390.8	1152	4	0	0	0	0	multi-exon	FALSE	canonical	3	3862	junction_2	305.375179083042	3372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACATGTGTGGTTGTCCT	-120437366	True	NA	-5	True	AATATA	-18	NA	120469748	120461671	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120462163_120463949_120464123_120465626_120465788_120469421
transcript_50482.nic	chr12	-	1067	4	NIC	ENSG00000111786.9	novel	1152	4	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	3	258	junction_2	1985.12574468778	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACATGTGTGGTTGTCCT	-120469775	False	NA	-5	True	AATATA	-18	NA	120469792	120461671	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_120462163_120463949_120464123_120465755_120465788_120469421
transcript_50486.known	chr12	+	537	3	FSM	ENSG00000111775.3	ENST00000229379.3	537	3	0	0	0	0	multi-exon	FALSE	canonical	3	9924	junction_2	426	2449	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGGTCATGAGCTGAGAG	120396065	True	NA	17	True	AATAAA	-14	NA	120438112	120440730	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_120438230_120438378_120438522_120440453
transcript_5049.known	chr1	+	868	7	FSM	ENSG00000117682.17	ENST00000427245.6	868	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	78.0101489123904	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGGTCCCTCTCATGTT	26428022	True	NA	-86	True	ATTAAA	-29	NA	26432315	26448565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26432377_26432890_26433009_26438167_26438285_26442730_26442874_26446315_26446433_26447558_26447661_26448355
transcript_50490.nic	chr12	-	2645	3	NIC	ENSG00000111786.9	novel	1152	4	NA	NA	11	0	intron_retention	FALSE	canonical	3	4321	junction_2	141	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACATGTGTGGTTGTCCT	-120437355	True	NA	-5	True	AATATA	-18	NA	120469737	120461671	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_120462163_120463949_120465788_120469421
transcript_50492.known	chr12	-	1153	2	FSM	ENSG00000170855.4	ENST00000302432.3	1153	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATACTTGGAATAGCTGTG	-120443565	True	NA	NA	False	NA	NA	NA	120446370	120444207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120444956_120445965
transcript_50493.known	chr12	-	1151	2	FSM	ENSG00000170855.4	ENST00000546954.2	1151	2	0	0	0	0	multi-exon	FALSE	canonical	3	735	junction_1	0	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTGCCTCTGGAACTCA	-120443579	True	NA	-14	True	AATAAA	-23	NA	120446384	120443963	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120444956_120446225
transcript_50494.known	chr12	-	946	2	FSM	ENSG00000111786.9	ENST00000546942.1	946	2	0	0	0	0	multi-exon	FALSE	canonical	3	4321	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTGATGAAATGCTAAACT	-120437336	True	NA	59	True	NA	NA	NA	120469718	120465138	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120465788_120469421
transcript_50495.known	chr12	-	1704	1	FSM	ENSG00000111786.9	ENST00000548326.1	1704	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTTAAATGTTTAGTA	-120463379	False	NA	-26	True	NA	NA	NA	120463396	120461692	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120461700_120463400
transcript_50497.known	chr12	+	663	3	FSM	ENSG00000088986.11	ENST00000242577.11	663	3	0	0	0	0	multi-exon	FALSE	canonical	3	3763	junction_1	38	1835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGTGTGAATTACAATT	120444868	True	NA	13	True	AATAAA	-16	NA	120496112	120498493	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_120496217_120496415_120496554_120498072
transcript_50500.known	chr12	+	1376	2	FSM	ENSG00000088986.11	ENST00000550845.5	1376	2	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGTTTTCTTGGAATTGGG	120444868	True	NA	NA	False	NA	NA	NA	120496112	120497673	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_120496217_120496401
transcript_50501.known	chr12	-	1214	2	FSM	ENSG00000248008.4	ENST00000668253.2	1218	2	0	4	0	-4	multi-exon	FALSE	canonical	3	76	junction_1	0	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGCCTCAGGTTCCTCAT	NA	False	NA	-3	True	ATTAAA	-18	NA	120495946	120491020	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120492111_120495822
transcript_50508.nic	chr12	+	3220	18	NIC	ENSG00000022840.17	novel	3814	17	NA	NA	-7	0	intron_retention	FALSE	canonical	3	25	junction_2	308.426837656601	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTCTTCCTGCCAAGGTT	120517272	True	NA	19	True	AATAAA	-15	NA	120534348	120576886	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_120534969_120539367_120539469_120546404_120546602_120552498_120552699_120554717_120554809_120557281_120557467_120557545_120557683_120560725_120560887_120562944_120563071_120563346_120563624_120563809_120563944_120565071_120565190_120565427_120565530_120566824_120566981_120571190_120571292_120575630_120575689_120575791_120575951_120576589
transcript_50520.known	chr12	+	2671	17	FSM	ENSG00000022840.17	ENST00000413266.6	2671	17	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_8	230.809682151768	1964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTCTTCCTGCCAAGGTT	120534799	False	NA	19	True	AATAAA	-15	NA	120534811	120576886	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_120534969_120546404_120546602_120552498_120552699_120554717_120554809_120557281_120557467_120557545_120557683_120560725_120560887_120562944_120563071_120563331_120563624_120563809_120563944_120565071_120565190_120565427_120565530_120566824_120566981_120571190_120571292_120575630_120575689_120575791_120575951_120576589
transcript_50537.nic	chr12	+	3045	16	NIC	ENSG00000022840.17	novel	3814	17	NA	NA	-34	0	intron_retention	FALSE	canonical	3	82	junction_13	230.872682566725	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTCTTCCTGCCAAGGTT	NA	False	NA	19	True	AATAAA	-15	NA	120534321	120576886	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_120534969_120546404_120546602_120552498_120552699_120554717_120554809_120557281_120557467_120557545_120557683_120560725_120560887_120562944_120563071_120563346_120563624_120563809_120563944_120565071_120565190_120565427_120565530_120566824_120566981_120575630_120575689_120575791_120575951_120576589
transcript_5054.known	chr1	+	582	6	FSM	ENSG00000117682.17	ENST00000533087.5	582	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	83.7505820875294	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGAGATGGCCTGGGGGG	26428072	True	NA	NA	False	NA	NA	NA	26432365	26447615	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26432396_26432890_26433009_26438167_26438285_26442730_26442874_26446315_26446433_26447558
transcript_5056.known	chr1	+	717	3	FSM	ENSG00000117682.17	ENST00000487944.5	717	3	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	49	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGACATTAACAAAGAAGT	26428051	True	NA	NA	False	AAGAAA	-6	NA	26432344	26438734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26432377_26432890_26433009_26438167
transcript_50574.known	chr12	-	1506	7	FSM	ENSG00000110871.15	ENST00000288532.11	1506	7	0	0	0	0	multi-exon	TRUE	canonical	3	341	junction_5	23.0849879070072	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTACTTGTCATTTTTTCT	-120522407	True	NA	-5	True	AGTAAA	-17	NA	120529158	120503278	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120503886_120503969_120504082_120504894_120504984_120510016_120510124_120516566_120516789_120522213_120522364_120528939
transcript_50578.known	chr12	-	701	2	FSM	ENSG00000110871.15	ENST00000547448.1	701	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACAAAAAAATTAGCCGGG	-120522403	True	NA	NA	False	ACTAAA	-2	NA	120529154	120526892	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120527379_120528939
transcript_50580.known	chr12	-	794	5	FSM	ENSG00000167272.11	ENST00000543355.5	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	413.762839679931	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTTACCTAGCATTCCC	-120575012	True	NA	-155	True	NA	NA	NA	120581381	120579153	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120579413_120579513_120579598_120579773_120579924_120580995_120581258_120581342
transcript_50581.known	chr12	-	1086	5	FSM	ENSG00000167272.11	ENST00000357500.5	1086	5	0	0	0	0	multi-exon	FALSE	canonical	3	726	junction_4	157.939861972841	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTAGTAGAGACGGGG	-120575033	True	NA	NA	False	NA	NA	NA	120581402	120578763	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120579413_120579513_120579598_120579773_120579924_120581114_120581258_120581342
transcript_50588.known	chr12	-	913	4	FSM	ENSG00000167272.11	ENST00000341039.6	913	4	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_2	382.967361533591	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTAGTAGAGACGGGG	-120575010	True	NA	NA	False	NA	NA	NA	120581379	120578763	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120579413_120579513_120579598_120581114_120581258_120581342
transcript_5059.known	chr1	+	656	4	FSM	ENSG00000117682.17	ENST00000374186.7	656	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	92.9599674889979	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGATATTGAGGGGTGTCA	26428035	True	NA	NA	False	AATAAA	-18	NA	26432328	26443080	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26432377_26432890_26433009_26438167_26438285_26442707
transcript_50591.known	chr12	-	718	2	FSM	ENSG00000167272.11	ENST00000539716.1	718	2	0	0	0	0	multi-exon	FALSE	canonical	3	726	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGTTAAATGCAGATAGA	-120575029	True	NA	NA	False	NA	NA	NA	120581398	120580595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120581258_120581342
transcript_50596.known	chr12	-	578	1	FSM	ENSG00000167272.11	ENST00000542568.1	578	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTTAGCATACTTATATT	-120573256	False	NA	-49	True	AATAAA	-18	NA	120579625	120579047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120579000_120579600
transcript_50597.known	chr12	-	821	4	FSM	ENSG00000167272.11	ENST00000542776.5	821	4	0	0	0	0	multi-exon	FALSE	canonical	3	788	junction_3	147.443397802532	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTTAGCATACTTATATT	-120574967	True	NA	-49	True	AATAAA	-18	NA	120581336	120579047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120579413_120579513_120579598_120579773_120579924_120581114
transcript_50598.nnic	chr12	+	1394	7	NNC	ENSG00000157782.10	novel	1597	6	NA	NA	-70	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.0083310198036	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGCCGTGATGGTCTTTC	120640305	True	NA	16	True	AATAAA	-18	NA	120640555	120667324	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_120640892_120641164_120641340_120659877_120659909_120660195_120660340_120660730_120660841_120661070_120661219_120666874
transcript_50599.known	chr12	+	1658	6	FSM	ENSG00000157782.10	ENST00000316803.8	1597	6	-74	13	-74	-13	multi-exon	FALSE	canonical	3	34	junction_1	4.09878030638384	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCCAAGAGCAAGACAGCC	120640301	True	NA	3	True	AATAAA	-5	NA	120640551	120667311	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_120641340_120659877_120659909_120660195_120660340_120660730_120660841_120661070_120661219_120666874
transcript_50600.known	chr12	-	496	2	FSM	ENSG00000256008.3	ENST00000544339.1	496	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATGTGAGACCACAATC	-120639949	False	NA	NA	False	ATTAAA	-25	NA	120640153	120630104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120630497_120640049
transcript_50603.nic	chr12	+	2482	6	NIC	ENSG00000110917.8	novel	6341	5	NA	NA	-63	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_5	577.909473879776	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGTTGGGACTGAGTT	120651810	True	NA	45	True	AATAAA	-16	NA	120687085	120701859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_120687532_120694090_120694270_120694823_120695001_120695094_120695153_120696315_120696542_120700463
transcript_50607.known	chr12	+	6341	5	FSM	ENSG00000110917.8	ENST00000228506.8	6341	5	0	0	0	0	multi-exon	FALSE	canonical	3	1440	junction_2	51.0899941280091	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGTTGGGACTGAGTT	120651873	True	NA	45	True	AATAAA	-16	NA	120687148	120701859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_120687532_120694090_120694270_120694823_120695001_120695094_120695153_120696315
transcript_5061.known	chr1	+	1148	7	FSM	ENSG00000198830.11	ENST00000619352.4	1148	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	3867.6033779188	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGCCTCTGATCTTTT	26371367	True	NA	NA	False	AATAAA	-22	NA	26472514	26475970	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26472563_26472607_26472628_26473482_26473528_26473702_26473733_26474084_26474136_26474571_26474668_26475112
transcript_50621.known	chr12	+	841	3	FSM	ENSG00000110917.8	ENST00000412616.2	841	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	771	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCGAGTAGAGAGCAGCC	120687230	False	NA	32	True	ATTAAA	-17	NA	120687244	120696690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_120687532_120694090_120694270_120696315
transcript_50626.known	chr12	+	4381	5	FSM	ENSG00000175970.11	ENST00000344651.5	4381	5	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_4	6.72681202353685	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCTCCCTCGTCCTGTCTC	120703125	True	NA	11	True	AATAAA	-19	NA	120710457	120723640	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_120710719_120713273_120713388_120716627_120716740_120716869_120717043_120719919
transcript_50627.known	chr12	+	896	1	FSM	ENSG00000175970.11	ENST00000618898.1	896	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCCGACATGTGAATCCT	120703125	True	NA	2	True	AATAAA	-18	NA	120710457	120711353	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_120710500_120711400
transcript_50630.nnic	chr12	+	2440	13	Fusion	ENSG00000175970.11_ENSG00000122971.9	novel	4381	5	NA	NA	-27	0	multi-exon	FALSE	canonical	3	10	junction_4	27.3053718768548	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTGTCCTCGCCCTCTC	120703098	True	NA	10	True	AATAAA	-16	NA	120710430	120740008	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr12_+_120710719_120713273_120713388_120716627_120716740_120716869_120717043_120727025_120727190_120736985_120737136_120737355_120737468_120737836_120737989_120738279_120738451_120738532_120738671_120738819_120738916_120739139_120739197_120739295
transcript_50633.known	chr12	+	1859	10	FSM	ENSG00000122971.9	ENST00000242592.9	1859	10	0	0	0	0	multi-exon	TRUE	canonical	3	85	junction_4	11.4611528517579	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTGTCCTCGCCCTCTC	120725368	True	NA	10	True	AATAAA	-16	NA	120725825	120740008	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_120725932_120727025_120727190_120736985_120737136_120737355_120737468_120737836_120737989_120738279_120738451_120738532_120738671_120738819_120738916_120739139_120739197_120739295
transcript_50636.nic	chr12	+	2066	9	NIC	ENSG00000122971.9	novel	1859	10	NA	NA	13	0	intron_retention	FALSE	canonical	3	85	junction_3	11.0425314126789	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTGTCCTCGCCCTCTC	120725381	True	NA	10	True	AATAAA	-16	NA	120725838	120740008	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_120725932_120727025_120727190_120736985_120737468_120737836_120737989_120738279_120738451_120738532_120738671_120738819_120738916_120739139_120739197_120739295
transcript_50640.known	chr12	-	4135	11	FSM	ENSG00000157837.16	ENST00000353487.7	4135	11	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_8	18.8827964030755	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTTTGTCATTCTCACT	-120902571	True	NA	0	True	ATTAAA	-21	NA	120904358	120762509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_120765071_120766262_120766373_120767393_120767594_120768324_120768489_120768952_120769060_120782654_120782768_120783673_120783753_120784473_120784594_120791468_120791558_120810808_120810887_120903844
transcript_50652.known	chr12	-	1339	7	FSM	ENSG00000157895.11	ENST00000546272.5	1339	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	58.5996302604945	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAAAGGAACCTTCCAG	-121012232	True	NA	NA	False	NA	NA	NA	121016487	121003875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_121004493_121005002_121005094_121006320_121006395_121010827_121010927_121011103_121011147_121012429_121012687_121016329
transcript_50654.known	chr12	-	4469	6	FSM	ENSG00000157895.11	ENST00000288757.7	4469	6	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	35.9444015112229	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGACTGATGGCAATGGT	-121012232	True	NA	2	True	AATAAA	-27	NA	121016487	121000485	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_121004490_121005002_121005094_121006320_121006395_121010827_121010927_121011103_121011147_121016329
transcript_50655.nic	chr12	-	1960	6	NIC	ENSG00000157895.11	novel	1339	7	NA	NA	-2	-593	combination_of_known_junctions	FALSE	canonical	3	80	junction_1	29.1588751497722	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTAGAAGCTCATGGCCA	-121012249	True	NA	NA	False	AAAAAG	-17	NA	121016504	121003014	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_121004493_121005002_121005094_121006320_121006395_121010827_121010927_121011103_121011147_121016329
transcript_50658.nic	chr12	-	604	6	NIC	ENSG00000157895.11	novel	1339	7	NA	NA	-2	-129	combination_of_known_junctions	FALSE	canonical	3	80	junction_1	29.1588751497722	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGTTGAAAAAGAAAGCC	-121012249	True	NA	NA	False	AAGAAA	-2	NA	121016504	121004370	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_121004493_121005002_121005094_121006320_121006395_121010827_121010927_121011103_121011147_121016329
transcript_5066.known	chr1	+	320	4	FSM	ENSG00000198830.11	ENST00000468388.5	320	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4744.61990047675	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAAGGTAAGTGCTAACA	26371302	True	NA	NA	False	AAAAAG	-45	NA	26472449	26474128	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26472628_26473459_26473528_26473702_26473733_26474084
transcript_50662.known	chr12	+	1429	13	FSM	ENSG00000135124.16	ENST00000543318.5	1429	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	38.0309632624085	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCAGCAGTCTGTTCTT	121208321	True	NA	NA	False	NA	NA	NA	121210128	121233737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_121210299_121217133_121217282_121221912_121221985_121222093_121222167_121222729_121222768_121222946_121223044_121228532_121228614_121228724_121228867_121228962_121229100_121232413_121232508_121232610_121232677_121232996_121233093_121233522
transcript_50666.known	chr12	+	1836	13	FSM	ENSG00000135124.16	ENST00000359949.11	1836	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	33.8472877626685	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCGAGGACCAGACATTAA	121210054	False	NA	-32	True	NA	NA	NA	121210064	121234070	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_121210299_121216954_121217003_121217133_121217282_121221912_121221985_121222093_121222167_121222946_121223044_121228532_121228614_121228724_121228867_121228962_121229100_121232413_121232508_121232610_121232677_121232996_121233093_121233522
transcript_50667.known	chr12	+	1084	12	FSM	ENSG00000135124.16	ENST00000542067.5	1084	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	30.338585202117	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCTACCCCACACCTGG	121208357	False	NA	NA	False	NA	NA	NA	121210164	121233547	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_121210299_121217133_121217282_121221912_121221985_121222093_121222167_121222946_121222963_121228532_121228614_121228724_121228867_121228962_121229100_121232413_121232508_121232610_121232677_121232996_121233093_121233522
transcript_50668.known	chr12	+	1760	12	FSM	ENSG00000135124.16	ENST00000337233.9	1760	12	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_7	9.85682630431258	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTCTGTTGTCTCATA	121208321	True	NA	4	True	ATTAAA	-16	NA	121210128	121234106	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_121210299_121217133_121217282_121221912_121221985_121222093_121222167_121222946_121223044_121228532_121228614_121228724_121228867_121228962_121229100_121232413_121232508_121232610_121232677_121232996_121233093_121233522
transcript_5067.known	chr1	+	1940	6	FSM	ENSG00000198830.11	ENST00000361427.6	1940	6	0	0	0	0	multi-exon	FALSE	canonical	3	9773	junction_2	355.842886678939	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTTGTCCATTCCCTTA	26371292	True	NA	6	True	AATAAA	-17	NA	26472439	26476642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26472628_26473482_26473528_26473702_26473733_26474084_26474136_26474571_26474668_26475112
transcript_50676.known	chr12	+	1612	11	FSM	ENSG00000135124.16	ENST00000543984.5	1612	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	28.1424945589406	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTCTGTTGTCTCATA	121208321	True	NA	4	True	ATTAAA	-16	NA	121210128	121234106	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_121210299_121221912_121221985_121222093_121222167_121222946_121223044_121228532_121228614_121228724_121228867_121228962_121229100_121232413_121232508_121232610_121232677_121232996_121233093_121233522
transcript_50691.known	chr12	-	2051	17	FSM	ENSG00000110931.19	ENST00000402834.8	2051	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	51.5727641299165	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGGGGACAAAAAAAAAAA	-121295416	True	NA	-3	True	NA	NA	NA	121296710	121240546	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_121240870_121244572_121244616_121245139_121245241_121248605_121248735_121249786_121249875_121249960_121250035_121252660_121252715_121253272_121253473_121255549_121255639_121255782_121255805_121260318_121260356_121263805_121263940_121268637_121268690_121269527_121269582_121270897_121270946_121274055_121274586_121296637
transcript_50692.known	chr12	-	2006	16	FSM	ENSG00000110931.19	ENST00000412367.6	2006	16	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	16.8673254153309	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTGACTCCATGACGTC	-121295392	True	NA	19	True	TTTAAA	-20	NA	121296686	121240524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_121240870_121245139_121245241_121248605_121248735_121249786_121249875_121249960_121250035_121252660_121252715_121253272_121253473_121255549_121255639_121255782_121255805_121260318_121260356_121263805_121263940_121268637_121268690_121269527_121269582_121270897_121270946_121274055_121274586_121296637
transcript_50694.known	chr12	-	5304	16	FSM	ENSG00000110931.19	ENST00000337174.7	5304	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_15	39.9062234077176	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAAGCCTGGGCCTCTTGG	NA	False	NA	-22	True	AATAAA	-17	NA	121298057	121237696	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_121240870_121245139_121245241_121248605_121248735_121249786_121249875_121249960_121250035_121252660_121252715_121253272_121253473_121255549_121255639_121255782_121255805_121260318_121260356_121263805_121263940_121268637_121268690_121269527_121269582_121270897_121270946_121274055_121274586_121297538
transcript_50704.nnic	chr12	-	4371	15	NIC	ENSG00000110931.19	novel	5304	16	NA	NA	-43	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_14	35.6173684987467	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAAGCCTGGGCCTCTTGG	-121295459	True	NA	-22	True	AATAAA	-17	NA	121296753	121237696	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_121240870_121245139_121245241_121248605_121248735_121249786_121249875_121249960_121250035_121252660_121252715_121253272_121253473_121255549_121255639_121255782_121255805_121260318_121260356_121263805_121263940_121268637_121268690_121269527_121269582_121270897_121270946_121296637
transcript_50713.known	chr12	-	5175	15	FSM	ENSG00000110931.19	ENST00000538733.5	5175	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_14	52.8758654100067	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAAGCCTGGGCCTCTTGG	NA	False	NA	-22	True	AATAAA	-17	NA	121298057	121237696	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_121240870_121245139_121245241_121249786_121249875_121249960_121250035_121252660_121252715_121253272_121253473_121255549_121255639_121255782_121255805_121260318_121260356_121263805_121263940_121268637_121268690_121269527_121269582_121270897_121270946_121274055_121274586_121297538
transcript_50715.nic	chr12	-	3323	15	ISM	ENSG00000110931.19	ENST00000412367.6	2006	16	-110	3063	-86	0	5prime_fragment	FALSE	canonical	3	122	junction_1	16.1017174898347	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGCCTTCTGTGTCTGGC	-121295502	True	NA	1	True	TATAAA	-16	NA	121296796	121243587	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_121245241_121248605_121248735_121249786_121249875_121249960_121250035_121252660_121252715_121253272_121253473_121255549_121255639_121255782_121255805_121260318_121260356_121263805_121263940_121268637_121268690_121269527_121269582_121270897_121270946_121274055_121274586_121296637
transcript_50740.known	chr12	-	2400	17	FSM	ENSG00000089053.13	ENST00000541887.5	2400	17	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_8	175.936323264271	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTTATTTTGTTGCT	-121341331	True	NA	-26	True	AATAAA	-15	NA	121352388	121308356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_121308692_121309700_121309864_121318276_121318425_121318500_121318609_121319696_121319819_121320384_121320460_121327095_121327232_121328315_121328459_121330582_121330673_121331346_121331429_121335532_121335724_121337290_121337393_121342002_121342070_121345838_121346032_121346895_121347006_121347801_121347882_121352133
transcript_50743.known	chr12	-	2574	17	FSM	ENSG00000089053.13	ENST00000261819.8	2574	17	0	0	0	0	multi-exon	TRUE	canonical	3	532	junction_8	135.416025639508	1487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAGTGCAAGCATCTCAGA	-121341354	True	NA	86	True	AATAAA	-19	NA	121352411	121308244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_121308692_121309700_121309864_121318276_121318425_121318500_121318609_121319696_121319819_121320384_121320460_121327095_121327232_121328315_121328498_121330582_121330673_121331346_121331429_121335532_121335724_121337290_121337393_121342002_121342070_121345838_121346032_121346895_121347006_121347801_121347882_121352133
transcript_5076.known	chr1	+	3192	22	FSM	ENSG00000117676.14	ENST00000374168.7	3192	22	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_16	39.5452036187918	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGCTCTCCTGCACTCTT	26526703	True	NA	19	True	AATAAA	-14	NA	26529760	26575025	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26529984_26536924_26536970_26546866_26546984_26547188_26547271_26551396_26551478_26551643_26551724_26553390_26553498_26554213_26554252_26554595_26554739_26555150_26555222_26555536_26555626_26556653_26556719_26556997_26557101_26558806_26558938_26560725_26560852_26561044_26561135_26561504_26561664_26571448_26571611_26571848_26571926_26572175_26572294_26573223_26573362_26574078
transcript_5078.known	chr1	+	3131	22	FSM	ENSG00000117676.14	ENST00000374166.8	3131	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	105.719583736825	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGTTGAAGCACGCTCT	26526720	True	NA	8	True	AATAAA	-3	NA	26529777	26575014	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26529984_26536924_26536970_26546866_26546984_26547188_26547271_26551396_26551478_26551643_26551724_26553390_26553498_26554213_26554252_26554595_26554739_26555183_26555222_26555536_26555626_26556653_26556719_26556997_26557101_26558806_26558938_26560725_26560852_26561044_26561135_26561504_26561664_26571448_26571611_26571848_26571926_26572175_26572294_26573223_26573362_26574078
transcript_5079.known	chr1	+	2596	22	FSM	ENSG00000117676.14	ENST00000526792.5	2596	22	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	105.274848139495	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTATGAAAAAAATG	26528160	False	NA	NA	False	TATAAA	-2	NA	26531217	26574431	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26531439_26536924_26536970_26546866_26546984_26547188_26547271_26551396_26551478_26551643_26551724_26553390_26553498_26554213_26554252_26554595_26554739_26555150_26555222_26555536_26555626_26556653_26556719_26556997_26557101_26558806_26558938_26560725_26560852_26561044_26561135_26561504_26561664_26571448_26571611_26571848_26571926_26572175_26572294_26573223_26573362_26574078
transcript_50807.known	chr12	-	677	5	FSM	ENSG00000089053.13	ENST00000536416.5	677	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	464.251211630083	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAATTTGGCTTTTCTGAC	-121341360	True	NA	NA	False	AAAAAG	-22	NA	121352417	121345839	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_121345952_121346035_121346127_121346895_121347006_121347801_121347882_121352133
transcript_50832.nic	chr12	-	5100	23	NIC	ENSG00000089094.20	novel	5315	23	NA	NA	-76	-83	intron_retention	FALSE	canonical	0	0	junction_18	87.2152391149866	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTCTTGAACTTTGAGGG	-121579611	False	NA	-9	True	TATAAA	-18	NA	121579720	121429181	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_121430470_121439856_121440076_121440815_121440978_121441069_121441234_121442156_121442837_121442991_121443031_121443679_121443794_121444011_121444273_121444449_121444537_121445274_121445419_121453119_121453345_121494578_121494666_121509566_121510040_121513275_121513403_121520984_121521101_121532805_121532960_121534496_121534591_121548876_121548984_121549459_121549639_121574546_121574594_121575780_121575860_121578801_121578947_121579611
transcript_5084.nnic	chr1	+	3092	21	NIC	ENSG00000117676.14	novel	3192	22	NA	NA	-59	0	intron_retention	FALSE	canonical	3	15	junction_16	104.332832799651	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGCTCTCCTGCACTCTT	NA	False	NA	19	True	AATAAA	-14	NA	26529701	26575025	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_26529984_26536924_26536970_26546866_26546984_26547188_26547271_26551396_26551478_26551643_26551724_26553390_26553498_26554213_26554252_26554595_26554739_26555150_26555222_26555536_26555626_26556653_26556719_26556997_26557101_26558806_26558938_26560725_26560852_26561044_26561135_26571448_26571611_26571848_26571926_26572175_26572294_26573223_26573362_26574078
transcript_50862.nic	chr12	-	3453	13	NIC	ENSG00000089094.20	novel	3170	14	NA	NA	3148	-83	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	107.121005046733	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTCTTGAACTTTGAGGG	-121466326	True	NA	-9	True	TATAAA	-18	NA	121467405	121429181	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_121430164_121430341_121430470_121439856_121440076_121440815_121440978_121441069_121441234_121442156_121442837_121442991_121443031_121443679_121443794_121444011_121444273_121444449_121444537_121445274_121445419_121453119_121453345_121467157
transcript_50870.nic	chr12	-	3717	12	NIC	ENSG00000089094.20	novel	5315	23	NA	NA	3148	0	intron_retention	FALSE	canonical	3	79	junction_11	82.9031098321089	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTAATTTCTGATTCAT	-121466326	True	NA	-27	True	AGTAAA	-20	NA	121467405	121429095	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_121430470_121439856_121440076_121440815_121440978_121441069_121441234_121442156_121442837_121442991_121443031_121443679_121443794_121444011_121444273_121444449_121444537_121445274_121445419_121453119_121453345_121467157
transcript_50873.nic	chr12	-	3631	12	NIC	ENSG00000089094.20	novel	3170	14	NA	NA	3148	-83	intron_retention	FALSE	canonical	3	79	junction_11	82.9031098321089	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTCTTGAACTTTGAGGG	-121466326	True	NA	-9	True	TATAAA	-18	NA	121467405	121429181	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_121430470_121439856_121440076_121440815_121440978_121441069_121441234_121442156_121442837_121442991_121443031_121443679_121443794_121444011_121444273_121444449_121444537_121445274_121445419_121453119_121453345_121467157
transcript_50874.nic	chr12	-	3034	12	NIC	ENSG00000089094.20	novel	3170	14	NA	NA	3148	92	intron_retention	FALSE	canonical	3	79	junction_11	82.9031098321089	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAATGCATACCAGTGTT	-121466326	True	NA	-9	True	TTTAAA	-17	NA	121467405	121429778	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_121430470_121439856_121440076_121440815_121440978_121441069_121441234_121442156_121442837_121442991_121443031_121443679_121443794_121444011_121444273_121444449_121444537_121445274_121445419_121453119_121453345_121467157
transcript_50889.known	chr12	-	1549	11	FSM	ENSG00000089094.20	ENST00000446152.6	1549	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	98.6956939283574	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGTGGGCAGGAGTGGC	-121573945	True	NA	NA	False	NA	NA	NA	121579644	121509571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_121510040_121513275_121513403_121520984_121521101_121532805_121532960_121534496_121534591_121548876_121548984_121549459_121549639_121574546_121574594_121575780_121575860_121578801_121578947_121579611
transcript_50909.known	chr12	+	2051	7	FSM	ENSG00000170633.17	ENST00000392465.7	2051	7	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	183.558044104734	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTACATTGTCTTGG	121392482	True	NA	24	True	AATAAA	-16	NA	121400118	121424348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_121400219_121402741_121402808_121416158_121416378_121417503_121417912_121420241_121420335_121420576_121420779_121423385
transcript_50914.known	chr12	+	2066	6	FSM	ENSG00000170633.17	ENST00000361234.10	1986	6	-77	-3	-42	-1	multi-exon	FALSE	canonical	3	433	junction_1	16.2308348522188	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTACATTGTCTTGGTCA	121392404	True	NA	27	True	AATAAA	-19	NA	121400040	121424351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_121400219_121416158_121416378_121417503_121417912_121420241_121420335_121420576_121420779_121423385
transcript_50923.known	chr12	+	1449	5	FSM	ENSG00000170633.17	ENST00000613529.4	1449	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	190.469649813297	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACATTGTCTTGGTCAG	121392446	True	NA	28	True	AATAAA	-20	NA	121400082	121424352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_121400219_121417860_121417912_121420241_121420335_121420576_121420779_121423385
transcript_50925.known	chr12	+	1612	4	FSM	ENSG00000170633.17	ENST00000553407.5	1612	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	179.447918783015	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGAGTCTCACTCTGTTG	121392492	True	NA	NA	False	NA	NA	NA	121400128	121418740	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_121400219_121402741_121402808_121416158_121416378_121417503
transcript_50929.known	chr12	+	593	2	FSM	ENSG00000170633.17	ENST00000555076.1	593	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCCTATTTTTAACTTAA	121392510	True	NA	NA	False	NA	NA	NA	121400146	121423906	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_121400219_121423385
transcript_50931.known	chr12	+	1496	3	FSM	ENSG00000276045.3	ENST00000617316.2	1496	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	124.5	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCGTGTCTTGTATTTGT	121623506	True	NA	26	True	CATAAA	-22	NA	121626549	121642040	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_121626866_121626870_121627051_121641040
transcript_50933.nnic	chr12	+	2415	3	NNC	ENSG00000276045.3	novel	2138	2	NA	NA	-75	432	intron_retention	FALSE	canonical	0	0	junction_2	124.5	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTTCTCCATATGTAT	NA	False	NA	4	True	AATAAA	-15	NA	121626474	121643109	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_121627051_121641040_121642619_121642848
transcript_50934.known	chr12	+	2138	2	FSM	ENSG00000276045.3	ENST00000646827.1	2138	2	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAGAAAAAAAAA	121623506	True	NA	NA	False	NA	NA	NA	121626549	121642677	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_121627051_121641040
transcript_50936.known	chr12	+	852	2	FSM	ENSG00000276045.3	ENST00000611718.1	852	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCGACAGTTCCAGGAG	121626801	False	NA	NA	False	NA	NA	NA	121626815	121641533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_121627175_121641040
transcript_50949.nnic	chr12	+	2942	15	NNC	ENSG00000188735.13	novel	2766	13	NA	NA	-41	-9	intron_retention	FALSE	canonical	1	4	junction_12	47.7918531183903	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTATGAAGAGCTCTCTGA	121708099	True	NA	10	True	AGTAAA	-11	NA	121712710	121782059	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_121712965_121743628_121743748_121748325_121748443_121750379_121750440_121752127_121752224_121761648_121761739_121770906_121770973_121771487_121771550_121773420_121773514_121774657_121774723_121775061_121775131_121775608_121776445_121779548_121779624_121780940_121781143_121781321
transcript_50965.known	chr12	+	2766	13	FSM	ENSG00000188735.13	ENST00000342607.10	2766	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_12	34.55631474693	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGATGGGAGGGGTGGGTG	121708140	True	NA	NA	False	NA	NA	NA	121712751	121778956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_121712965_121743628_121743748_121748325_121748443_121750379_121750440_121752127_121752224_121761648_121761739_121770906_121770973_121771487_121771550_121773420_121773514_121774657_121774723_121775061_121775131_121775608_121776445_121778076
transcript_5097.known	chr1	+	3046	1	FSM	ENSG00000117713.21	ENST00000637788.1	3046	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGTTTTTAATGGTAAAAA	26778087	False	NA	91	True	NA	NA	NA	26778098	26781144	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26778100_26781100
transcript_50983.known	chr12	+	7510	12	FSM	ENSG00000188735.13	ENST00000449592.7	7510	12	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_8	20.1124935474002	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTCTCTGACTGTGATTC	121708140	True	NA	19	True	AGTAAA	-20	NA	121712751	121782068	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_121712965_121743628_121743748_121748325_121748443_121750379_121750440_121752127_121752224_121761648_121761739_121770906_121770973_121771487_121771550_121773420_121773514_121774657_121774723_121775061_121775131_121775608
transcript_51.known	ERCC-00143	+	767	1	FSM	ERCC-00143A	DQ668362	767	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00143_+_0_800
transcript_51000.nic	chr12	+	1609	10	NIC	ENSG00000188735.13	novel	7510	12	NA	NA	-41	96	combination_of_known_junctions	FALSE	canonical	3	22	junction_6	36.5452535297753	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCGTCTGCCTCGTGCTCT	121708099	True	NA	6	True	NA	NA	NA	121712710	121776254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_121712965_121743628_121743748_121748325_121748443_121750379_121750440_121752127_121752224_121761648_121761739_121773420_121773514_121774657_121774723_121775061_121775131_121775608
transcript_51001.nic	chr12	+	3144	10	NIC	ENSG00000188735.13	novel	7510	12	NA	NA	-41	0	intron_retention	FALSE	canonical	3	22	junction_6	36.5452535297753	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGCCAGATGTGGCCC	121708099	True	NA	18	True	AATAAA	-19	NA	121712710	121777789	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_121712965_121743628_121743748_121748325_121748443_121750379_121750440_121752127_121752224_121761648_121761739_121773420_121773514_121774657_121774723_121775061_121775131_121775608
transcript_51010.known	chr12	-	2435	5	FSM	ENSG00000139725.8	ENST00000267205.7	2435	5	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	26.1569780364629	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCATTCCTTTCTGCATT	-121792359	True	NA	-5	True	AATAAA	-21	NA	121793688	121777753	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_121779663_121780871_121781007_121781082_121781193_121793151_121793240_121793495
transcript_51014.known	chr12	-	1024	5	FSM	ENSG00000212694.8	ENST00000428029.6	1024	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	9.44391338376205	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGAGCTCAGGGCCCGGC	-121802847	False	NA	NA	False	NA	NA	NA	121802933	121795639	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_121796243_121799846_121799957_121801706_121801809_121802630_121802785_121802878
transcript_51016.known	chr12	-	1485	4	FSM	ENSG00000139725.8	ENST00000537171.5	1485	4	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_2	19.7709101684492	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTCCCCTTCACGGGCCA	-121794106	False	NA	-73	True	NA	NA	NA	121794262	121780486	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_121781007_121781082_121781193_121793151_121793240_121793495
transcript_51020.nic	chr12	+	2328	6	ISM	ENSG00000139718.12	ENST00000604567.6	8557	17	-35	21657	-35	-19240	5prime_fragment	FALSE	canonical	2	7	junction_2	1.78885438199983	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAGGGGCTGTGATTGAG	121802697	True	NA	NA	False	AATAAA	-17	NA	121803973	121810999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_121804234_121804723_121804912_121805117_121805217_121805834_121806106_121808207_121808321_121809602
transcript_51022.known	chr12	+	3420	18	FSM	ENSG00000158023.10	ENST00000397454.2	3420	18	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_16	4.56024645725042	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCAGTCTCAGTTATGT	121918247	True	NA	6	True	AATAAA	-18	NA	121918591	121972069	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_121918709_121921285_121921684_121923621_121923991_121931745_121931887_121934246_121934357_121942533_121942646_121942894_121942976_121948983_121949062_121951479_121951531_121954119_121954335_121957073_121957269_121958271_121958523_121958942_121959095_121960584_121960759_121961977_121962163_121966954_121967070_121968005_121968170_121971557
transcript_51026.known	chr12	+	2725	6	FSM	ENSG00000110801.14	ENST00000541212.6	2725	6	0	0	0	0	multi-exon	FALSE	canonical	3	434	junction_2	11.1642285895623	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCGAGTTCATACTTCTC	121883582	True	NA	NA	False	NA	NA	NA	121888789	121918297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_121888995_121894738_121894842_121899633_121899846_121903005_121903108_121915855_121915945_121916283
transcript_51027.known	chr12	+	793	5	FSM	ENSG00000110801.14	ENST00000540962.5	793	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	192.321833133942	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGATTGTGGGCAAGTGGG	121883554	True	NA	-26	True	NA	NA	NA	121888761	121916549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_121888995_121894738_121894842_121903005_121903108_121915855_121915945_121916283
transcript_51028.known	chr12	+	516	4	FSM	ENSG00000110801.14	ENST00000542602.1	516	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	212.870852866239	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAGGATCTGGAAGAGGC	121883578	True	NA	NA	False	NA	NA	NA	121888785	121916399	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_121888995_121903005_121903108_121915855_121915945_121916283
transcript_51029.known	chr12	+	534	3	FSM	ENSG00000110801.14	ENST00000538613.5	534	3	0	0	0	0	multi-exon	FALSE	canonical	3	434	junction_2	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTTGGCCACTCAAGTCC	121883576	True	NA	NA	False	NA	NA	NA	121888783	121899853	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_121888995_121894738_121894842_121899633
transcript_51031.known	chr12	+	3729	22	FSM	ENSG00000158023.10	ENST00000288912.9	3729	22	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_17	6.88387645894672	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACAAAGTTGGACATTCC	121918247	True	NA	NA	False	ATTAAA	-25	NA	121918591	122003919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_121918696_121921285_121921684_121923621_121923991_121931745_121931887_121934246_121934357_121942533_121942646_121942894_121942976_121948983_121949062_121951479_121951531_121954119_121954335_121957073_121957269_121958271_121958523_121958942_121959095_121960584_121960759_121961977_121962163_121966954_121967070_121968005_121968170_121975243_121975335_121975541_121975686_121999715_121999945_122001496_122001599_122003651
transcript_51035.known	chr12	+	3722	6	FSM	ENSG00000110987.9	ENST00000261822.5	3722	6	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_5	20.7306536317599	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTGTGGTTTTGTCTCA	122018788	True	NA	11	True	AATAAA	-17	NA	122021883	122062044	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122022184_122030699_122030782_122035330_122035428_122043885_122044054_122054804_122054927_122059091
transcript_51038.known	chr12	+	6247	6	FSM	ENSG00000110987.9	ENST00000538010.5	6247	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	35.9799944413559	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTGTGGTTTTGTCTCA	NA	False	NA	11	True	AATAAA	-17	NA	122019421	122062044	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122022184_122030699_122030782_122035330_122035428_122043885_122044054_122054804_122054990_122059091
transcript_51044.known	chr12	+	871	4	FSM	ENSG00000110987.9	ENST00000432926.2	871	4	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_3	19.4821855949366	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCACACACCTGTGATCC	122018882	True	NA	NA	False	NA	NA	NA	122021977	122044371	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122022184_122030699_122030782_122035330_122035428_122043885
transcript_51046.known	chr12	+	850	3	FSM	ENSG00000256546.3	ENST00000653475.1	850	3	0	0	0	0	multi-exon	FALSE	canonical	1	17	junction_1	16	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCACTCAAAATAGATCATA	122063281	True	NA	15	True	ATTAAA	-27	NA	122064276	122068568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122064683_122068027_122068192_122068288
transcript_51049.known	chr12	-	2495	14	FSM	ENSG00000139719.11	ENST00000544349.6	2495	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	154.186009234907	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTCATCCTCTAATCCC	-122262390	False	NA	-18	True	AATAAA	-6	NA	122266336	122231562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_122232428_122232799_122232969_122235785_122235924_122238586_122238725_122239877_122239946_122242381_122242509_122244568_122244763_122249870_122250046_122250982_122251100_122261260_122261448_122263571_122263700_122264133_122264200_122264711_122264805_122266306
transcript_5105.known	chr1	+	4377	4	FSM	ENSG00000060642.12	ENST00000674222.1	4377	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	31.1697859401626	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCTGTCCTCAAATAACT	26787539	True	NA	NA	False	AATAAA	-16	NA	26787966	26800659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26787990_26790758_26790894_26794112_26795235_26797562
transcript_51054.known	chr12	-	4559	13	FSM	ENSG00000139719.11	ENST00000267199.9	4559	13	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_1	52.4711560976335	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTGTGTCTTGCTATA	-122262548	True	NA	-34	True	AATAAA	-17	NA	122266494	122229563	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_122232428_122232799_122232969_122235785_122235924_122238586_122238725_122239877_122239946_122242381_122242509_122244568_122244763_122249870_122250046_122250982_122251100_122261260_122261448_122263571_122263700_122264133_122264200_122266306
transcript_51064.nic	chr12	-	2676	11	NIC	ENSG00000139719.11	novel	2495	14	NA	NA	-437	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_5	136.903652252232	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTCATCCTCTAATCCC	NA	False	NA	-18	True	AATAAA	-6	NA	122266931	122231562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_122232428_122232799_122232969_122235785_122235924_122238586_122238725_122239877_122239946_122249870_122250046_122250982_122251100_122261260_122261448_122263571_122263700_122264133_122264200_122266306
transcript_51074.known	chr12	-	1418	7	FSM	ENSG00000184047.20	ENST00000267169.11	1418	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	258.274832085685	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAACATCAACAGGACTTAA	-122216471	True	NA	39	True	NA	NA	NA	122226039	122207793	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_122208578_122209772_122209859_122216487_122216585_122216758_122216870_122218265_122218398_122224511_122224645_122225964
transcript_51077.known	chr12	-	1471	6	FSM	ENSG00000184047.20	ENST00000464942.7	1471	6	0	0	0	0	multi-exon	FALSE	canonical	3	460	junction_4	66.7311021938046	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTATGCAGCCTCCTTCC	-122216484	True	NA	-5	True	NA	NA	NA	122226052	122207667	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122218265_122218398_122224511_122224645_122225964
transcript_51078.known	chr12	-	1336	6	FSM	ENSG00000184047.20	ENST00000342392.3	1336	6	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_4	247.787489595419	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGGCCTCTTGTTCCTTC	-122216484	True	NA	-25	True	NA	NA	NA	122226052	122207773	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122218265_122218398_122224644_122224749_122225964
transcript_51090.known	chr12	-	2569	5	FSM	ENSG00000184047.20	ENST00000644509.1	2569	5	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_4	222.8530906225	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTTCCTTCCTTTCTT	-122216494	True	NA	-18	True	NA	NA	NA	122226062	122207766	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122218265_122218398_122224644
transcript_51091.known	chr12	-	1859	5	FSM	ENSG00000184047.20	ENST00000443649.9	1859	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	264.581154846675	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGCCTCCTTCCTTGAG	-122226536	False	NA	0	True	NA	NA	NA	122226568	122207662	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122218265_122218398_122225964
transcript_51092.known	chr12	-	1338	5	FSM	ENSG00000184047.20	ENST00000353548.11	1338	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	240.992090119157	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCTATGCAGCCTCCTTC	-122216484	True	NA	-6	True	NA	NA	NA	122226052	122207668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122224511_122224645_122225964
transcript_5110.known	chr1	+	4673	4	FSM	ENSG00000060642.12	ENST00000674202.1	4673	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	33.0252428706689	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCTGTCCTCAAATAACT	26787522	True	NA	NA	False	AATAAA	-16	NA	26787949	26800659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26788269_26790758_26790894_26794112_26795235_26797562
transcript_51102.known	chr12	-	555	5	FSM	ENSG00000184047.20	ENST00000541273.6	555	5	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_3	271.366334500063	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGAGGCCTACCTGCGT	-122216471	True	NA	NA	False	AAAACA	-32	NA	122226039	122208409	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122224644_122224749_122225964
transcript_51106.known	chr12	+	2891	3	FSM	ENSG00000176383.9	ENST00000324189.5	2891	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	0.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCTTGACTAATCTTTAA	122203494	True	NA	NA	False	AATAAA	-21	NA	122203708	122208952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122203802_122204521_122204685_122206317
transcript_51108.known	chr12	+	2749	2	FSM	ENSG00000176383.9	ENST00000546192.1	2749	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCATCACCTTGACTAA	NA	False	NA	NA	False	AATAAA	-14	NA	122203680	122208945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122203802_122206317
transcript_51109.known	chr12	-	2641	5	FSM	ENSG00000184047.20	ENST00000645569.1	2641	5	0	0	0	0	multi-exon	FALSE	canonical	3	460	junction_4	72.8744639774455	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACAGGACTTAACACAGG	-122216454	True	NA	-39	True	NA	NA	NA	122226022	122207787	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122218265_122218398_122224511
transcript_5112.known	chr1	+	4972	4	FSM	ENSG00000060642.12	ENST00000674273.1	4972	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	47.4856703531591	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTATGCCTCCTGTCCTCA	26787830	True	NA	NA	False	AATAAA	-9	NA	26788194	26800652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26788820_26790758_26790894_26794112_26795235_26797562
transcript_51131.nic	chr12	-	2261	9	NIC	ENSG00000130779.22	novel	5568	24	NA	NA	-32	-89	combination_of_known_junctions	FALSE	canonical	2	8	junction_8	28.2875856163088	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGCAGAATCAACAAGACT	-122399959	True	NA	NA	False	AATAGA	-37	NA	122400046	122341176	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_122341698_122352725_122352787_122354452_122354557_122355114_122355313_122360958_122361182_122363982_122364108_122377388_122377961_122380367_122380559_122399780
transcript_51132.nic	chr12	-	2174	9	ISM	ENSG00000130779.22	ENST00000537178.5	5229	24	-67	69134	-30	-89	5prime_fragment	FALSE	canonical	3	68	junction_5	10.4522724801834	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGCAGAATCAACAAGACT	-122422578	False	NA	NA	False	AATAGA	-37	NA	122422699	122341176	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_122341698_122352725_122352787_122354452_122354557_122355114_122355313_122360958_122361182_122363982_122364108_122377388_122377961_122380367_122380559_122422520
transcript_51142.known	chr12	-	4255	14	FSM	ENSG00000033030.15	ENST00000672018.1	4255	14	0	0	0	0	multi-exon	TRUE	non_canonical	3	77	junction_8	25.0830572959839	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACATAGTGTTTTTAACC	-122501054	False	NA	-4	True	AATAAA	-19	NA	122501073	122471598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_122474276_122477840_122477959_122478205_122478293_122480189_122480312_122481521_122481665_122481944_122482088_122482634_122482696_122483278_122483345_122483459_122483564_122489385_122489464_122490461_122490568_122492714_122492790_122498826_122498868_122500639
transcript_51147.nic	chr12	-	2720	12	NIC	ENSG00000033030.15	novel	4255	14	NA	NA	-70	0	combination_of_known_junctions	FALSE	non_canonical	3	15	junction_7	37.4598407554208	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAAGACTTTGAATACAAA	-122499216	True	NA	-3	True	AATAAA	-20	NA	122501002	122472892	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_122474276_122477840_122477959_122478205_122478293_122480189_122480312_122481521_122481665_122481944_122482088_122482634_122482696_122489385_122489464_122490461_122490568_122492714_122492790_122498826_122498868_122500639
transcript_5115.known	chr1	+	2181	4	FSM	ENSG00000060642.12	ENST00000374145.6	2181	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	50.2946871503895	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAATAAAGTGGGACCATT	26787749	False	NA	-23	True	NA	NA	NA	26788176	26798268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26788395_26790758_26790894_26794112_26795235_26797562
transcript_51165.known	chr12	-	1956	11	FSM	ENSG00000111011.18	ENST00000433877.6	1956	11	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_7	273.596710506541	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	-122518819	True	NA	-40	True	AATAAA	-13	NA	122526936	122505058	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_122505707_122506833_122506924_122508217_122508448_122511108_122511189_122515104_122515228_122517226_122517431_122518838_122519052_122520503_122520582_122521384_122521429_122522142_122522300_122526847
transcript_51167.known	chr12	-	2001	11	FSM	ENSG00000111011.18	ENST00000532695.5	2001	11	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_7	264.913646307622	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	-122518883	True	NA	-40	True	AATAAA	-13	NA	122527000	122505058	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_122505707_122506833_122506924_122508217_122508451_122511108_122511189_122515104_122515228_122517226_122517431_122518838_122519030_122520503_122520582_122521384_122521429_122522142_122522300_122526847
transcript_51177.known	chr12	-	3461	10	FSM	ENSG00000111011.18	ENST00000331738.12	3461	10	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_3	132.875881934985	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGTCCAAGTGATCTTC	-122518819	True	NA	NA	False	AATAAA	-18	NA	122526936	122503453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_122505707_122506833_122506924_122508217_122508448_122511108_122511189_122515104_122515228_122517226_122517431_122518838_122519030_122521384_122521429_122522142_122522300_122526847
transcript_51178.nic	chr12	-	2261	10	NIC	ENSG00000111011.18	novel	2001	11	NA	NA	-5	333	combination_of_known_junctions	FALSE	canonical	3	378	junction_3	142.767703924769	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTGCATGCTTTTTGC	-122518888	True	NA	NA	False	AATAAA	-15	NA	122527005	122504725	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_122505707_122506833_122506924_122508217_122508451_122511108_122511189_122515104_122515228_122517226_122517431_122518838_122519030_122521384_122521429_122522142_122522300_122526847
transcript_51182.nic	chr12	-	1896	10	NIC	ENSG00000111011.18	novel	2001	11	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	378	junction_3	142.767703924769	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	-122518856	True	NA	-40	True	AATAAA	-13	NA	122526973	122505058	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_122505707_122506833_122506924_122508217_122508451_122511108_122511189_122515104_122515228_122517226_122517431_122518838_122519030_122521384_122521429_122522142_122522300_122526847
transcript_51201.nic	chr12	-	1745	7	ISM	ENSG00000111011.18	ENST00000331738.12	3461	10	-859	7657	-795	0	5prime_fragment	FALSE	canonical	3	561	junction_4	81.4058761187831	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTAATTTTTTTCATTCTT	NA	False	NA	NA	False	AAGAAA	-8	NA	122527795	122511110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_122511189_122515104_122515228_122517226_122517431_122518838_122519030_122521384_122521429_122522142_122522300_122526847
transcript_51203.nic	chr12	-	862	6	ISM	ENSG00000111011.18	ENST00000331738.12	3461	10	-52	11649	-1	60	5prime_fragment	FALSE	canonical	3	561	junction_3	88.9975280555589	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTATATTTCTTAATTCAT	-122518871	True	NA	85	True	NA	NA	NA	122526988	122515102	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_122515228_122517226_122517431_122518838_122519030_122521384_122521429_122522142_122522300_122526847
transcript_51205.known	chr12	-	3156	5	FSM	ENSG00000111011.18	ENST00000527796.6	3156	5	0	0	0	0	multi-exon	FALSE	canonical	3	743	junction_3	22.9401394939089	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTCCCTTCAGAGGCAGA	-122518870	True	NA	25	True	NA	NA	NA	122526987	122515162	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_122515228_122517226_122517431_122518838_122521429_122522142_122522300_122526847
transcript_51206.nic	chr12	-	723	5	ISM	ENSG00000111011.18	ENST00000331738.12	3461	10	-47	13782	4	0	5prime_fragment	FALSE	canonical	3	561	junction_2	91.5324396047653	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAGTCGGTAGGTGACCA	-122518866	True	NA	86	True	NA	NA	NA	122526983	122517235	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_122517431_122518838_122519030_122521384_122521429_122522142_122522300_122526847
transcript_51207.nic	chr12	-	643	5	ISM	ENSG00000111011.18	ENST00000331738.12	3461	10	-41	13856	10	-74	5prime_fragment	FALSE	canonical	3	561	junction_2	91.5324396047653	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCGGATCAGGTCTCGTTC	-122518860	True	NA	12	True	AAGAAA	-28	NA	122526977	122517309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_122517431_122518838_122519030_122521384_122521429_122522142_122522300_122526847
transcript_51210.nic	chr12	-	487	4	ISM	ENSG00000111011.18	ENST00000331738.12	3461	10	-51	15430	0	-44	5prime_fragment	FALSE	canonical	3	561	junction_1	93.3845097790135	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATCAAGAGGCAGAAGTC	-122518870	True	NA	NA	False	AAGAAA	-5	NA	122526987	122518883	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_122519030_122521384_122521429_122522142_122522300_122526847
transcript_51211.known	chr12	-	980	4	FSM	ENSG00000111011.18	ENST00000525387.5	980	4	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	277.203094419156	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTACAAGATGAATTTGAC	-122518837	True	NA	NA	False	ATTAAA	-38	NA	122526954	122519909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_122520582_122521384_122521429_122522142_122522300_122526847
transcript_51215.known	chr12	-	1146	9	FSM	ENSG00000111011.18	ENST00000525335.6	1146	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	339.162732880545	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAATGCTTTGGCAGGGC	-122518832	True	NA	NA	False	AATGAA	-24	NA	122526949	122508249	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_122508448_122511108_122511189_122514711_122514729_122515104_122515228_122517226_122517431_122518838_122519030_122521384_122521429_122522142_122522330_122526847
transcript_51216.known	chr12	-	1041	8	FSM	ENSG00000111011.18	ENST00000527399.3	1041	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	340.791395886404	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTAATTTTTTTCATTCTT	-122518878	True	NA	NA	False	AAGAAA	-8	NA	122526995	122511110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_122511189_122515104_122515228_122517230_122517431_122518838_122519052_122520503_122520582_122521384_122521429_122522142_122522300_122526847
transcript_5123.known	chr1	+	5045	8	FSM	ENSG00000204160.12	ENST00000374142.9	5045	8	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	8.9511143987546	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTGTCTGGTGGCGCCT	26824212	True	NA	NA	False	AATAAA	-25	NA	26826687	26857604	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26827140_26832446_26832608_26848607_26848758_26850300_26850439_26850557_26850607_26851128_26851232_26852752_26852866_26853725
transcript_51231.known	chr12	+	2719	8	FSM	ENSG00000139726.11	ENST00000280557.11	2719	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	476.037127689401	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTGAATCATTTTTTTAA	122720352	True	NA	17	True	ATTAAA	-18	NA	122752823	122771064	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122752951_122753692_122753808_122762186_122762207_122762844_122762930_122765303_122765388_122767487_122767605_122768781_122768922_122769033
transcript_51236.nic	chr12	+	492	6	ISM	ENSG00000139726.11	ENST00000455982.2	1052	8	-33	2555	-33	-2555	5prime_fragment	FALSE	canonical	0	0	junction_2	514.984504621256	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGACCGTACCACAAAAGG	122720319	True	NA	NA	False	AATAAA	-34	NA	122752790	122767515	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_122752951_122753692_122753808_122762186_122762207_122762844_122762930_122765303_122765388_122767487
transcript_51239.nic	chr12	+	436	5	ISM	ENSG00000139726.11	ENST00000455982.2	1052	8	-33	4711	-33	2103	5prime_fragment	FALSE	canonical	0	0	junction_2	536.120555472368	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAGGAGAAGAAAAAACA	122720319	True	NA	36	True	NA	NA	NA	122752790	122765359	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_122752951_122753692_122753808_122762186_122762207_122762844_122762930_122765303
transcript_51241.known	chr12	+	671	4	FSM	ENSG00000139726.11	ENST00000539463.1	671	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	567.648365334268	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTGGTGGCAGGCACCTG	122720355	True	NA	NA	False	ACTAAA	-17	NA	122752826	122763256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122752951_122753692_122753808_122762186_122762207_122762844
transcript_51242.known	chr12	+	699	2	FSM	ENSG00000139726.11	ENST00000537955.1	699	2	0	0	0	0	multi-exon	FALSE	canonical	3	1385	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTGGAGTGTTGGGTGG	122720375	True	NA	NA	False	NA	NA	NA	122752846	122754287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122752951_122753692
transcript_51247.known	chr12	+	4509	32	FSM	ENSG00000130787.14	ENST00000253083.9	4509	32	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_21	18.1551298782163	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGCCCCAGAGGGAGGG	122833064	True	NA	4	True	AATAAA	-25	NA	122835456	122862961	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122835644_122848030_122848095_122848465_122848609_122848795_122848853_122849874_122849956_122850834_122850912_122851235_122851298_122854042_122854184_122854904_122854963_122855052_122855129_122855264_122855406_122855550_122855613_122855830_122855904_122855979_122856164_122856255_122856345_122856431_122856549_122856624_122856727_122857020_122857216_122858101_122858250_122858348_122858436_122858837_122858946_122859060_122859198_122859425_122859537_122859771_122859831_122860046_122860078_122860147_122860211_122860422_122860524_122860678_122860785_122860915_122861040_122861130_122861193_122861307_122861515_122861705
transcript_51250.nic	chr12	+	4613	31	NIC	ENSG00000130787.14	novel	4509	32	NA	NA	-34	0	intron_retention	FALSE	canonical	3	109	junction_21	18.4512571086332	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGCCCCAGAGGGAGGG	122833030	True	NA	4	True	AATAAA	-25	NA	122835422	122862961	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_122835644_122848030_122848095_122848465_122848609_122848795_122848853_122849874_122849956_122850834_122850912_122851235_122851298_122854042_122854184_122854904_122854963_122855052_122855129_122855264_122855406_122855550_122855613_122855830_122855904_122855979_122856164_122856255_122856345_122856431_122856549_122856624_122856727_122857020_122857216_122858101_122858250_122858348_122858436_122858837_122858946_122859060_122859198_122859425_122859537_122859771_122859831_122860046_122860211_122860422_122860524_122860678_122860785_122860915_122861040_122861130_122861193_122861307_122861515_122861705
transcript_5126.known	chr1	+	1308	1	FSM	ENSG00000175793.12	ENST00000339276.6	1308	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTCTCTCTTCCAGTT	26862761	True	NA	11	True	AATAAA	-18	NA	26863148	26864456	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26863100_26864500
transcript_51262.known	chr12	+	3078	18	FSM	ENSG00000130787.14	ENST00000535831.5	3078	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	35.7176548089583	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCCATGGGTCATTCCAG	NA	False	NA	NA	False	NA	NA	NA	122834452	122858017	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122835007_122848030_122848095_122848465_122848609_122848795_122848853_122849874_122849956_122850834_122850912_122851235_122851298_122854042_122854184_122854904_122854963_122855052_122855129_122855264_122855406_122855550_122855613_122855830_122855904_122855979_122856164_122856255_122856345_122856431_122856549_122856624_122856727_122857020
transcript_51264.known	chr12	+	2054	18	FSM	ENSG00000130787.14	ENST00000452196.6	2054	18	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_10	15.2927601207476	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCATAGCCTGTGTCATT	122833088	True	NA	57	True	NA	NA	NA	122835480	122857384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122835644_122848030_122848095_122848465_122848609_122848795_122848853_122849874_122849956_122850834_122850912_122851235_122851298_122854042_122854184_122854904_122854963_122855052_122855129_122855264_122855406_122855550_122855613_122855830_122855904_122855979_122856164_122856255_122856345_122856431_122856549_122856624_122856727_122857020
transcript_51267.nic	chr12	+	1115	7	ISM	ENSG00000130787.14	ENST00000452196.6	2054	18	-58	5677	-34	-3652	5prime_fragment	FALSE	canonical	3	135	junction_2	6.59966329107444	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCCTGCCCCTCCTGGGG	122833030	True	NA	NA	False	AAAAAG	-10	NA	122835422	122851707	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_122835644_122848030_122848095_122848465_122848609_122848795_122848853_122849874_122849956_122850834_122850912_122851235
transcript_51276.known	chr12	-	879	4	FSM	ENSG00000139722.7	ENST00000535765.5	879	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	85.6673151726426	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCCCTCCACACCAGCCG	-122892961	True	NA	NA	False	NA	NA	NA	122896127	122867153	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_122867608_122868479_122868563_122870889_122871056_122895951
transcript_51277.nnic	chr12	-	2550	3	NIC	ENSG00000139722.7	novel	2706	4	NA	NA	-13	0	intron_retention	FALSE	canonical	1	2	junction_2	99	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCCTGTCACTTATTTAC	-122892974	True	NA	-1	True	AATAAA	-18	NA	122896140	122865329	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_122867608_122868479_122868563_122895951
transcript_51287.known	chr12	+	2308	8	FSM	ENSG00000111325.16	ENST00000397389.6	2308	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	69.2923413620046	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTTGTGTTTGCGGCTG	NA	False	NA	7	True	TATAAA	-14	NA	122974579	122980042	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122975122_122975810_122975868_122976252_122976402_122976653_122976768_122976870_122976971_122978441_122978570_122978752_122979011_122979082
transcript_51290.known	chr12	+	1568	8	FSM	ENSG00000111325.16	ENST00000545056.5	1568	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	75.1976986187145	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGGTGGACGATGAGGG	122974228	True	NA	NA	False	NA	NA	NA	122974747	122979265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122975122_122975810_122975868_122976600_122976768_122976870_122976971_122977980_122978200_122978359_122978570_122978752_122979011_122979082
transcript_51292.known	chr12	+	1949	8	FSM	ENSG00000111325.16	ENST00000538755.5	1949	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	68.9486647249019	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAGCCTCCAGAGAGCAC	122974691	False	NA	NA	False	NA	NA	NA	122974702	122979762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122975122_122975810_122975868_122976653_122976768_122976870_122976971_122977980_122978092_122978359_122978570_122978752_122979011_122979082
transcript_513.known	chr1	-	1057	6	FSM	ENSG00000160087.21	ENST00000400929.6	1057	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	217.993944870035	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGTGGGCCTTGTGTGCT	-1264092	True	NA	-121	True	GGGGCT	-4	NA	1273855	1254984	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1255488_1256044_1256126_1256991_1257131_1257207_1257311_1263345_1263387_1273665
transcript_5130.known	chr1	-	4665	5	FSM	ENSG00000142751.15	ENST00000374135.9	4665	5	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_2	10.5593560409714	178	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTGTATTCTCTTTT	-26887587	True	NA	0	True	AATAAA	-18	NA	26890283	26876131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_26879750_26884159_26884291_26885972_26886134_26888968_26889126_26889685
transcript_51300.known	chr12	+	1465	7	FSM	ENSG00000111325.16	ENST00000545612.5	1465	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	57.6155843114999	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGGCTCAACGGTGTG	122974232	True	NA	8	True	AATAAA	-20	NA	122974751	122979438	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122975122_122975810_122975868_122976653_122976768_122976870_122976971_122978359_122978570_122978752_122979011_122979082
transcript_51302.known	chr12	+	1488	7	FSM	ENSG00000111325.16	ENST00000454694.6	1488	7	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	46.0241482509152	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAGCCTCCAGAGAGCAC	122974451	False	NA	NA	False	NA	NA	NA	122974970	122979762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122975122_122975810_122975868_122976653_122976768_122976870_122976971_122978441_122978570_122978752_122979011_122979082
transcript_51304.known	chr12	+	1696	7	FSM	ENSG00000111325.16	ENST00000538628.5	1696	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	64.442265288827	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGGCTCAACGGTGTG	122974232	True	NA	8	True	AATAAA	-20	NA	122974751	122979438	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122975122_122975810_122975868_122976653_122976768_122976870_122977167_122978324_122978570_122978752_122979011_122979082
transcript_51312.known	chr12	+	1780	7	FSM	ENSG00000111325.16	ENST00000228922.11	1780	7	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_4	30.1298117411237	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCCTTTGTGTTTGCGGCT	122973465	True	NA	6	True	TATAAA	-13	NA	122975219	122980041	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122975384_122975810_122975868_122976653_122976768_122976870_122976971_122978441_122978570_122978752_122979011_122979082
transcript_51319.known	chr12	+	996	6	FSM	ENSG00000111325.16	ENST00000542117.5	996	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	49.6104827632225	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGTGAGTGTGTGACCC	122974258	True	NA	NA	False	NA	NA	NA	122974777	122979005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122975122_122975810_122975868_122976653_122976768_122976870_122976971_122978441_122978570_122978752
transcript_51322.known	chr12	+	2274	6	FSM	ENSG00000111325.16	ENST00000406539.6	2274	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	49.829308644612	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGCGAGGGAGTCAGGG	122974222	True	NA	103	True	NA	NA	NA	122974741	122979533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122975122_122975810_122976768_122976870_122976971_122978441_122978570_122978752_122979011_122979082
transcript_51334.known	chr12	+	1956	6	FSM	ENSG00000111325.16	ENST00000536150.5	1956	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	61.2385499501744	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTGTGTTTGCGGCTGT	122974207	True	NA	8	True	TATAAA	-15	NA	122974726	122980043	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122975122_122976653_122976768_122976870_122976971_122978441_122978570_122978752_122979011_122979082
transcript_51342.known	chr12	+	910	6	FSM	ENSG00000182196.14	ENST00000426960.6	910	6	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	680.954212851349	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCCAGTCTCTTCTCA	122979132	True	NA	-97	True	NA	NA	NA	122980262	122982795	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122980386_122981128_122981267_122981594_122981880_122981956_122982075_122982468_122982539_122982619
transcript_51351.nic	chr12	+	1303	6	NIC	ENSG00000182196.14	novel	1318	6	NA	NA	105	0	combination_of_known_junctions	FALSE	canonical	3	98	junction_2	639.087912575414	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	122979237	False	NA	17	True	ATTAAA	-17	NA	122980367	122982909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_122980746_122981128_122981267_122981570_122981880_122981956_122982075_122982468_122982539_122982619
transcript_51353.known	chr12	+	1591	6	FSM	ENSG00000182196.14	ENST00000543566.6	1591	6	0	0	0	0	multi-exon	FALSE	canonical	3	569	junction_2	489.940241253972	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTCTGTGGCTTTTTGT	122980042	False	NA	21	True	ATTAAA	-21	NA	122980059	122982913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122980746_122981128_122981267_122981594_122981880_122981956_122982075_122982468_122982539_122982619
transcript_51354.nic	chr12	+	1355	6	NIC	ENSG00000182196.14	novel	1295	6	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	242	junction_3	653.784857579311	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	122980180	False	NA	17	True	ATTAAA	-17	NA	122980204	122982909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_122980746_122981128_122981300_122981570_122981810_122982030_122982075_122982468_122982539_122982619
transcript_51355.known	chr12	+	1023	6	FSM	ENSG00000182196.14	ENST00000315580.10	1023	6	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_2	586.542888457443	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	122968646	True	NA	17	True	ATTAAA	-17	NA	122980680	122982909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122980746_122981128_122981300_122981570_122981880_122981956_122982075_122982468_122982539_122982619
transcript_51356.nic	chr12	+	1331	6	NIC	ENSG00000182196.14	novel	1491	6	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	242	junction_3	593.552895705176	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	122980180	False	NA	17	True	ATTAAA	-17	NA	122980204	122982909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_122980746_122981128_122981300_122981594_122981810_122982030_122982075_122982468_122982539_122982619
transcript_51357.known	chr12	+	1491	6	FSM	ENSG00000182196.14	ENST00000453766.7	1491	6	0	0	0	0	multi-exon	FALSE	canonical	3	600	junction_2	481.090677523479	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	122980164	False	NA	17	True	ATTAAA	-17	NA	122980188	122982909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122980746_122981128_122981300_122981594_122981880_122981956_122982075_122982468_122982539_122982619
transcript_51358.known	chr12	+	1295	6	FSM	ENSG00000182196.14	ENST00000539770.6	1295	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	705.268913252243	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTCTGTTCTGTGGCTT	122980154	False	NA	16	True	ATTAAA	-16	NA	122980178	122982908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122980746_122981128_122981300_122981655_122981810_122982030_122982075_122982468_122982539_122982619
transcript_51368.known	chr12	+	818	6	FSM	ENSG00000182196.14	ENST00000412505.6	818	6	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_3	656.734649611241	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTGAAAGAGCAGCACTT	122968668	True	NA	-32	True	NA	NA	NA	122980702	122982860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122980813_122981128_122981267_122981594_122981810_122982030_122982075_122982468_122982539_122982619
transcript_51369.nic	chr12	+	1068	6	NIC	ENSG00000182196.14	novel	1318	6	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	328	junction_1	604.23617898964	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	122980579	True	NA	17	True	ATTAAA	-17	NA	122980645	122982909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_122980813_122981128_122981267_122981594_122981880_122981956_122982075_122982468_122982539_122982619
transcript_51371.nic	chr12	+	1125	6	NIC	ENSG00000182196.14	novel	1023	6	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	256	junction_2	676.238596946374	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	122980579	True	NA	17	True	ATTAAA	-17	NA	122980645	122982909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_122980813_122981128_122981300_122981570_122981880_122981956_122982075_122982468_122982539_122982619
transcript_51373.known	chr12	+	796	6	FSM	ENSG00000182196.14	ENST00000439686.6	796	6	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_1	598.060398287664	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGCGGCCCAGCCTGGG	122968713	True	NA	NA	False	NA	NA	NA	122980747	122982706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122980813_122981128_122981300_122981594_122981880_122981956_122982075_122982468_122982539_122982619
transcript_51375.known	chr12	+	1318	6	FSM	ENSG00000182196.14	ENST00000454885.6	1318	6	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	777.574330852041	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	122980442	False	NA	17	True	ATTAAA	-17	NA	122980494	122982909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122980888_122981128_122981267_122981570_122981880_122981956_122982075_122982468_122982539_122982619
transcript_51406.known	chr12	+	1339	5	FSM	ENSG00000182196.14	ENST00000392435.7	1339	5	0	0	0	0	multi-exon	FALSE	canonical	3	569	junction_2	506.393127915457	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCCCAGCCTGGGCAGGT	122980166	False	NA	NA	False	NA	NA	NA	122980190	122982711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122980746_122981128_122981267_122981594_122981880_122981956_122982075_122982468
transcript_5141.nnic	chr1	+	1540	10	NNC	ENSG00000090273.14	novel	1792	9	NA	NA	-53	211	at_least_one_novel_splicesite	TRUE	canonical	3	111	junction_2	1247.58894385912	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCTGTGTCCTCTCTTG	26921664	False	NA	14	True	ATTAAA	-15	NA	26921689	26946395	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_26921930_26924088_26924167_26934248_26934420_26941456_26941661_26941752_26941819_26942659_26942777_26942870_26943066_26945389_26945474_26945567_26945687_26946129
transcript_51442.known	chr12	+	1684	4	FSM	ENSG00000182196.14	ENST00000539576.5	1684	4	0	0	0	0	multi-exon	FALSE	canonical	3	799	junction_1	390.048714906228	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTCTCTGTTCTGTGGC	122968647	True	NA	14	True	ATTAAA	-14	NA	122980681	122982906	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122980746_122981128_122981880_122981956_122982539_122982619
transcript_51444.known	chr12	+	1677	4	FSM	ENSG00000182196.14	ENST00000540382.5	1677	4	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_1	611.923197795279	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTATTAAAGGCCCCCTGG	122968698	True	NA	-9	True	NA	NA	NA	122980732	122982883	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122980813_122981128_122981880_122981956_122982539_122982619
transcript_51446.known	chr12	-	3330	11	FSM	ENSG00000150967.19	ENST00000540285.5	3330	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	6.05309838016862	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTCTGACTTCTACTTGG	-122966153	True	NA	-1	True	AATAAA	-21	NA	122966500	122928993	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_122930172_122932191_122932329_122935271_122935432_122940110_122940285_122944390_122944520_122946024_122946223_122948623_122948830_122949787_122949919_122950450_122950566_122959634_122960323_122966286
transcript_51447.known	chr12	-	3484	12	FSM	ENSG00000150967.19	ENST00000280560.13	3484	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	3.96263540321879	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGACTTCTACTTGGGC	-122966116	True	NA	1	True	AATAAA	-23	NA	122966463	122928991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_122930172_122932191_122932329_122935271_122935432_122940110_122940285_122940806_122940996_122944390_122944520_122946024_122946223_122948623_122948830_122949787_122949919_122950450_122950566_122959634_122960323_122966286
transcript_51448.known	chr12	+	1273	5	FSM	ENSG00000182196.14	ENST00000536502.5	1273	5	0	0	0	0	multi-exon	FALSE	canonical	3	569	junction_1	478.983493974479	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCACTTCTCAGCTATTAAA	122968686	True	NA	-19	True	NA	NA	NA	122980720	122982873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122981267_122981594_122981880_122981956_122982075_122982468_122982539_122982619
transcript_51449.known	chr12	-	3399	11	FSM	ENSG00000150967.19	ENST00000346530.9	3399	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	6.35924523823386	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTCTGACTTCTACTTGG	-122966494	False	NA	-1	True	AATAAA	-21	NA	122966509	122928993	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_122930172_122932191_122932329_122935271_122935432_122940110_122940285_122940806_122940996_122946024_122946223_122948623_122948830_122949787_122949919_122950450_122950566_122959634_122960323_122966286
transcript_51450.known	chr12	+	1341	6	FSM	ENSG00000111325.16	ENST00000545396.5	1341	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	62.036763294034	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGCTCAACGGTGTGC	122973484	True	NA	9	True	AATAAA	-21	NA	122975238	122979439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_122975384_122975810_122975868_122976653_122976768_122976870_122976964_122978324_122978570_122978752
transcript_51456.known	chr12	-	6369	24	FSM	ENSG00000051825.15	ENST00000606320.6	6369	24	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_15	20.5381290482242	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTAAGCAAATCTGCCACC	-123230226	True	NA	NA	False	AAAAAG	-17	NA	123233141	123154214	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_123156909_123160780_123160850_123161135_123161384_123162114_123162219_123163013_123163135_123163949_123164091_123165301_123165478_123166654_123166790_123176687_123176790_123179925_123179991_123181162_123181211_123194385_123194602_123198246_123198335_123202163_123202320_123202623_123203085_123203249_123203376_123210055_123210163_123214743_123214835_123218375_123218500_123221371_123221896_123223037_123223128_123227462_123227617_123230260_123230523_123233074
transcript_51464.nic	chr12	-	4074	23	NIC	ENSG00000051825.15	novel	6369	24	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_21	17.8409525187659	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAGACTAGTACATGCTG	-123230241	True	NA	-4	True	AATAAA	-19	NA	123233156	123156398	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_123156909_123160780_123160850_123161135_123161384_123162114_123162219_123163013_123163135_123163949_123164091_123165301_123165478_123166654_123166790_123176687_123176790_123179925_123179991_123181162_123181211_123194385_123194602_123198246_123198335_123202163_123202320_123202623_123203085_123210055_123210163_123214743_123214835_123218375_123218500_123221371_123221896_123223037_123223128_123227462_123227617_123230260_123230523_123233074
transcript_51478.nnic	chr12	-	1244	5	NNC	ENSG00000111328.7	novel	1346	4	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	887.467851530409	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATTAAAATGTGGGTT	-123260584	True	NA	-33	True	AATAAA	-19	NA	123271885	123261002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_123261804_123265195_123265323_123267184_123267283_123271563_123271635_123271738
transcript_51480.nnic	chr12	-	1568	4	NNC	ENSG00000111328.7	novel	1161	4	NA	NA	423	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	1001.34842420941	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATTAAAATGTGGGTT	-123270687	False	NA	-33	True	AATAAA	-19	NA	123270718	123261002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_123261804_123265195_123265323_123267184_123267283_123270176
transcript_51481.known	chr12	-	1281	4	FSM	ENSG00000111328.7	ENST00000535979.5	1281	4	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_3	969.295735171791	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATTAAAATGTGGGTT	-123271110	False	11301	-33	True	AATAAA	-19	NA	123271141	123261002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_123261804_123265195_123265323_123267184_123267283_123270886
transcript_51483.known	chr12	-	931	4	FSM	ENSG00000111328.7	ENST00000544658.5	931	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	1005.11934062025	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATGTAACTTCTTTTTT	-123272303	False	31	NA	False	NA	NA	NA	123272334	123261275	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_123261804_123265195_123265323_123267184_123267283_123272156
transcript_51484.known	chr12	+	1554	3	FSM	ENSG00000130921.9	ENST00000253233.6	1554	3	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_2	7	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGGAGTCAAACATTAAT	123231217	True	NA	38	True	AATAAA	-45	NA	123233435	123257960	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_123233532_123253646_123253957_123256812
transcript_51487.known	chr12	+	2648	3	FSM	ENSG00000130921.9	ENST00000425637.3	2648	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	94	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTAGTAAAGTCAATTTT	123233228	False	NA	4	True	AATAAA	-11	NA	123233384	123257926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_123233532_123253646_123255034_123256812
transcript_51491.known	chr12	+	3022	2	FSM	ENSG00000130921.9	ENST00000546132.2	3022	2	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGGAGGCTGAGGCAGGA	123231230	True	NA	NA	False	AATACA	-44	NA	123233448	123256585	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_123233532_123253646
transcript_51500.nic	chr12	-	2911	18	ISM	ENSG00000139697.14	ENST00000267176.8	11121	32	-391	31701	-387	-31701	5prime_fragment	FALSE	canonical	3	29	junction_15	11.0853873702631	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATAGATCCAGATTCTATT	NA	False	NA	NA	False	AAAAAG	-8	NA	123365234	123320809	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_123320867_123321534_123321733_123323679_123323832_123325501_123325600_123326151_123326335_123327425_123327580_123327706_123327813_123327891_123328028_123328733_123328896_123330418_123330510_123331241_123331376_123334052_123334214_123336394_123336492_123340987_123341089_123345257_123345568_123348028_123348134_123350309_123350442_123364700
transcript_51501.nic	chr12	-	2914	18	ISM	ENSG00000139697.14	ENST00000602398.3	11128	32	-387	31701	-387	-31701	5prime_fragment	FALSE	canonical	3	27	junction_15	11.4423483446423	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATAGATCCAGATTCTATT	NA	False	NA	NA	False	AAAAAG	-8	NA	123365234	123320809	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_123320867_123321534_123321733_123323679_123323832_123325501_123325600_123326151_123326335_123327425_123327580_123327706_123327813_123327891_123328028_123328733_123328896_123330418_123330510_123331241_123331376_123334052_123334214_123336394_123336492_123340987_123341089_123345257_123345571_123348028_123348134_123350309_123350442_123364700
transcript_51504.nnic	chr12	-	2520	18	NNC	ENSG00000139697.14	novel	11128	32	NA	NA	-6	-32426	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_17	22.0370873300688	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTTCAGTATATTAAAT	-123359399	True	NA	NA	False	NA	NA	NA	123364853	123321534	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_123321733_123323679_123323832_123325501_123325600_123326151_123326335_123327425_123327580_123327706_123327813_123327891_123328028_123328733_123328896_123330418_123330510_123331241_123331376_123334052_123334214_123336394_123336492_123340987_123341089_123345257_123345571_123348028_123348134_123350309_123350442_123357808_123357853_123364700
transcript_5151.known	chr1	+	1792	9	FSM	ENSG00000090273.14	ENST00000321265.10	1792	9	0	0	0	0	multi-exon	FALSE	canonical	3	2986	junction_5	88.0943209009525	2139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTAGTCTATGTATGTT	26862550	True	NA	9	True	AATAAA	-14	NA	26921742	26946871	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_26921930_26924088_26924167_26941456_26941661_26941752_26941819_26942659_26942777_26942870_26943066_26945389_26945474_26945567_26945687_26946129
transcript_51510.nic	chr12	-	2775	17	ISM	ENSG00000139697.14	ENST00000267176.8	11121	32	-312	32426	-308	-32426	5prime_fragment	FALSE	canonical	3	29	junction_14	11.4043234674399	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTTCAGTATATTAAAT	-123365053	False	NA	NA	False	NA	NA	NA	123365155	123321534	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_123321733_123323679_123323832_123325501_123325600_123326151_123326335_123327425_123327580_123327706_123327813_123327891_123328028_123328733_123328896_123330418_123330510_123331241_123331376_123334052_123334214_123336394_123336492_123340987_123341089_123345257_123345568_123348028_123348134_123350309_123350442_123364700
transcript_51511.nic	chr12	-	2857	17	ISM	ENSG00000139697.14	ENST00000602398.3	11128	32	-387	32426	-387	-32426	5prime_fragment	FALSE	canonical	3	27	junction_14	11.7710914425978	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTTCAGTATATTAAAT	NA	False	NA	NA	False	NA	NA	NA	123365234	123321534	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_123321733_123323679_123323832_123325501_123325600_123326151_123326335_123327425_123327580_123327706_123327813_123327891_123328028_123328733_123328896_123330418_123330510_123331241_123331376_123334052_123334214_123336394_123336492_123340987_123341089_123345257_123345571_123348028_123348134_123350309_123350442_123364700
transcript_51516.nic	chr12	-	2645	16	ISM	ENSG00000139697.14	ENST00000267176.8	11121	32	-391	34582	-387	-34582	5prime_fragment	FALSE	canonical	3	29	junction_13	11.5346820020705	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCGGAAAGGTGAGCACT	NA	False	NA	NA	False	AATAAA	-6	NA	123365234	123323690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_123323832_123325501_123325600_123326151_123326335_123327425_123327580_123327706_123327813_123327891_123328028_123328733_123328896_123330418_123330510_123331241_123331376_123334052_123334214_123336394_123336492_123340987_123341089_123345257_123345568_123348028_123348134_123350309_123350442_123364700
transcript_51517.nic	chr12	-	2275	16	ISM	ENSG00000139697.14	ENST00000602398.3	11128	32	-14	34582	-14	-34582	5prime_fragment	FALSE	canonical	3	27	junction_13	11.9145102944081	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCGGAAAGGTGAGCACT	-123359407	True	NA	NA	False	AATAAA	-6	NA	123364861	123323690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_123323832_123325501_123325600_123326151_123326335_123327425_123327580_123327706_123327813_123327891_123328028_123328733_123328896_123330418_123330510_123331241_123331376_123334052_123334214_123336394_123336492_123340987_123341089_123345257_123345571_123348028_123348134_123350309_123350442_123364700
transcript_51529.known	chr12	+	752	2	FSM	ENSG00000256092.3	ENST00000543072.2	783	2	31	0	5	0	multi-exon	FALSE	canonical	3	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCTCTCACACACATAGAA	123364740	True	NA	NA	False	TTTAAA	-41	NA	123364952	123366113	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_123365116_123365524
transcript_51530.known	chr12	+	1920	1	FSM	ENSG00000256092.3	ENST00000602918.1	1920	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCTTTTGTAAAGTCATT	123363801	True	NA	3	True	AATAAA	-18	NA	123363867	123365787	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_123363900_123365800
transcript_51531.known	chr12	+	2776	8	FSM	ENSG00000183955.14	ENST00000402868.8	2776	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	28.1062125458673	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCACGTGTGTGTCTTTCT	123382812	True	NA	3	True	ATTAAA	-19	NA	123384131	123409353	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_123384209_123389432_123389555_123390629_123390787_123395046_123395267_123396344_123396433_123403572_123403633_123404883_123405075_123407492
transcript_51533.known	chr12	+	1774	7	FSM	ENSG00000183955.14	ENST00000437519.5	1774	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	41.5989449652539	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACCACAGAAAACAACT	123382846	True	NA	NA	False	AATAAA	-24	NA	123384165	123408507	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_123384209_123390629_123390787_123395046_123395267_123396344_123396433_123403572_123403633_123404883_123405075_123407492
transcript_51534.known	chr12	+	3069	9	NNC	ENSG00000183955.14	novel	2776	8	NA	NA	-359	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	42.6568795741086	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCCACGTGTGTGTCTTT	123383752	True	NA	1	True	ATTAAA	-17	NA	123383772	123409351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_123384209_123389432_123389555_123390629_123390787_123395046_123395267_123396344_123396433_123403572_123403633_123404883_123405075_123407492_123408807_123408870
transcript_51536.known	chr12	-	1752	4	FSM	ENSG00000150977.11	ENST00000280571.10	1752	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	2.62466929133727	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTCGCCTGCTCTGTG	-123436571	True	NA	NA	False	AGTAAA	-19	NA	123436684	123415038	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_123415922_123423043_123423158_123430507_123430660_123436081
transcript_51537.nnic	chr12	-	1286	3	NIC	ENSG00000150977.11	novel	1752	4	NA	NA	-36	-350	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	16	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGCTTATCTAGAGTGGT	-123436687	True	NA	-4	True	ATTAAA	-23	NA	123436720	123415388	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_123415922_123423043_123423158_123436081
transcript_51539.known	chr12	+	1477	2	FSM	ENSG00000184209.15	ENST00000526639.3	1477	2	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_1	0	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGGCATTTGTAAGGAGC	123455590	True	NA	NA	False	NA	NA	NA	123458138	123466936	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_123458217_123465537
transcript_51541.known	chr12	+	2544	4	FSM	ENSG00000086598.11	ENST00000262225.8	2544	4	0	0	0	0	multi-exon	FALSE	canonical	3	3498	junction_2	283.027678269576	2196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGTGTAATGTCTCGAT	123529812	True	NA	17	True	AATAAA	-20	NA	123584551	123598582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_123584817_123586746_123586940_123590341_123590450_123596604
transcript_51544.known	chr12	+	433	2	FSM	ENSG00000086598.11	ENST00000544188.1	433	2	0	0	0	0	multi-exon	FALSE	canonical	3	4069	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTACATCACATTCCAAGAG	123529858	True	NA	NA	False	NA	NA	NA	123584597	123586960	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_123584817_123586746
transcript_51545.known	chr12	+	2656	14	FSM	ENSG00000111364.16	ENST00000238146.9	2656	14	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_11	40.6003760148152	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAGTGTGTAAATGTAG	123596823	True	NA	37	True	AATAAA	-21	NA	123602098	123620943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_123602257_123605930_123605982_123606072_123606160_123607431_123607524_123607599_123607663_123608679_123608830_123609938_123610129_123613169_123613253_123615184_123615317_123616510_123616604_123617757_123617873_123618668_123618838_123619431_123619725_123619963
transcript_51559.nic	chr12	+	1584	13	ISM	ENSG00000111364.16	ENST00000238146.9	2656	14	-8	1319	-6	-4	5prime_fragment	FALSE	canonical	3	265	junction_11	39.7627512741371	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGGGAGAAGAAAATTCA	123596815	True	NA	NA	False	AAAACA	-6	NA	123602090	123619624	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_123602257_123605930_123605982_123606072_123606160_123607431_123607524_123607599_123607663_123608679_123608830_123609938_123610129_123613169_123613253_123615184_123615317_123616510_123616604_123617757_123617873_123618668_123618838_123619431
transcript_51560.nic	chr12	+	1914	13	ISM	ENSG00000111364.16	ENST00000238146.9	2656	14	-264	1245	-242	-18	5prime_fragment	FALSE	canonical	3	265	junction_11	39.7627512741371	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAATGAGAAAAGGAAAAGG	123601824	False	NA	NA	False	AATAAA	-44	NA	123601834	123619698	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_123602257_123605930_123605982_123606072_123606160_123607431_123607524_123607599_123607663_123608679_123608830_123609938_123610129_123613169_123613253_123615184_123615317_123616510_123616604_123617757_123617873_123618668_123618838_123619431
transcript_51575.known	chr12	+	3327	13	FSM	ENSG00000111358.14	ENST00000543341.7	3327	13	0	0	0	0	multi-exon	TRUE	canonical	3	77	junction_1	11.4624992426996	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGGTTGAATTATTTCC	123630732	True	NA	19	True	AATAAA	-16	NA	123633828	123662604	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_123633873_123639263_123639344_123645454_123645562_123647962_123648127_123650993_123651057_123652531_123652562_123652706_123652736_123654923_123654999_123655770_123655825_123659515_123659585_123659794_123659931_123660045_123660083_123660165
transcript_51603.known	chr12	+	1472	12	FSM	ENSG00000111358.14	ENST00000228955.11	1472	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	30.9427624082684	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAATGAGTAAGGAGAA	123630732	True	NA	126	True	NA	NA	NA	123633828	123660829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_123633873_123645454_123645562_123647962_123648127_123650993_123651057_123652531_123652562_123652706_123652736_123654923_123654999_123655770_123655825_123659515_123659585_123659794_123659931_123660045_123660083_123660165
transcript_51605.nnic	chr12	+	1199	11	NNC	ENSG00000111364.16	novel	2656	14	NA	NA	-5	-302	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_10	108.029116445521	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATCTGTTTGCAGTGTTGG	123596816	True	NA	NA	False	ATTAAA	-17	NA	123602091	123617568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_123602257_123605930_123605982_123606072_123606160_123607431_123607524_123607599_123607663_123608679_123608830_123609938_123610129_123613169_123613253_123615184_123615317_123616510_123616604_123617475
transcript_51623.nnic	chr12	-	1577	10	NNC	ENSG00000111361.13	novel	2397	9	NA	NA	0	-624	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	315.772577953904	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCTGATGTGGTGTTGCAT	-123624350	True	NA	-7	True	AATAAA	-33	NA	123633686	123621029	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_123621512_123621707_123621921_123622635_123622762_123624786_123624863_123626424_123626494_123627043_123627157_123630168_123630286_123630396_123630534_123632344_123632447_123633544
transcript_51626.known	chr12	-	2397	9	FSM	ENSG00000111361.13	ENST00000424014.7	2397	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	256.635411381594	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGTGATCCTCCTGCCT	-123624350	True	NA	NA	False	NA	NA	NA	123633686	123620405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_123621921_123622635_123622762_123624786_123624863_123626424_123626494_123627043_123627157_123630168_123630286_123630396_123630534_123632344_123632447_123633544
transcript_51634.nic	chr12	-	2552	8	NIC	ENSG00000111361.13	novel	2397	9	NA	NA	18	-622	intron_retention	FALSE	canonical	0	0	junction_3	272.659090425822	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATGTGGTGTTGCATCA	-123624412	True	NA	-5	True	AATAAA	-35	NA	123633748	123621027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_123622762_123624786_123624863_123626424_123626494_123627043_123627157_123630168_123630286_123630396_123630534_123632344_123632447_123633544
transcript_51638.known	chr12	-	1768	5	FSM	ENSG00000111361.13	ENST00000537073.1	1768	5	0	0	0	0	multi-exon	FALSE	canonical	3	753	junction_1	28.5864915650732	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGATGGGGTTTCACCAT	NA	False	NA	NA	False	NA	NA	NA	123633766	123625966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_123627157_123630168_123630286_123630396_123630534_123632344_123632447_123633544
transcript_51643.known	chr12	+	2908	18	FSM	ENSG00000168778.13	ENST00000303372.7	2908	18	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	4.85142578835653	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTAAGTGCCCTGTG	123670110	True	NA	25	True	AATAAA	-26	NA	123671112	123708399	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_123671323_123671506_123671615_123672055_123672133_123673614_123673811_123679188_123679290_123686835_123687036_123688050_123688178_123690532_123690675_123692657_123692724_123694841_123694977_123695219_123695298_123696414_123696496_123697086_123697199_123699703_123699811_123704531_123704689_123706725_123706852_123706984_123707074_123707603
transcript_51649.known	chr12	+	6507	20	FSM	ENSG00000185344.15	ENST00000330342.8	6507	20	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_11	21.9997481728221	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGGTGTTTTGCTTTATT	123708152	True	NA	5	True	AATAAA	-19	NA	123712352	123761755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_123712683_123718622_123718702_123722350_123722449_123724653_123724792_123726196_123726286_123727782_123727910_123733925_123734009_123735530_123735625_123737058_123737272_123743784_123743936_123744200_123744338_123744596_123744785_123744881_123744973_123747606_123747726_123748574_123748786_123751109_123751230_123752282_123752403_123754419_123754538_123756814_123756987_123757926
transcript_51662.known	chr12	+	3228	18	FSM	ENSG00000185344.15	ENST00000540368.6	3228	18	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_11	23.2139142142981	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGAATTGATTGAACTTA	123708334	False	NA	NA	False	NA	NA	NA	123712534	123755441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_123712683_123718622_123718702_123722350_123722449_123724653_123724792_123726196_123726286_123727782_123727910_123733925_123734009_123735530_123735625_123737058_123737272_123743784_123743936_123744200_123744338_123744596_123744785_123744881_123744973_123747606_123747726_123748574_123748786_123751109_123751230_123752282_123752403_123754419
transcript_51669.known	chr12	+	1621	9	FSM	ENSG00000185344.15	ENST00000613625.5	1621	9	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_3	16.216792993684	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACATGGTGTAAAAGTGAAA	123708155	True	NA	-36	True	TTTAAA	-23	NA	123712355	123737644	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_123712683_123718622_123718702_123722350_123722449_123724653_123724792_123726196_123726286_123727782_123727910_123733925_123734009_123735530_123735625_123737058
transcript_51670.known	chr12	+	1054	2	FSM	ENSG00000185344.15	ENST00000676034.1	1054	2	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTTTACCATGTTGGCCA	123712565	True	NA	NA	False	NA	NA	NA	123712582	123719576	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_123712683_123718622
transcript_51673.known	chr12	+	2385	5	FSM	ENSG00000178882.15	ENST00000389727.8	2385	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	28.2167946443249	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGGGACTTCCTTTTCTGT	123967971	True	NA	2	True	AATAAA	-13	NA	123973240	124316022	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_123973353_123973885_123974021_124149594_124149792_124311817_124311928_124314191
transcript_51675.nnic	chr12	+	2336	4	NNC	ENSG00000178882.15	novel	2487	3	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	31.3723161756065	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGACTTCCTTTTCTGTCT	124294726	True	NA	4	True	AATAAA	-15	NA	124295082	124316024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_124295162_124295322_124295637_124311817_124311928_124314191
transcript_51676.known	chr12	+	2487	3	FSM	ENSG00000178882.15	ENST00000546355.4	2487	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	1.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGACTTCCTTTTCTGTCT	124294736	True	NA	4	True	AATAAA	-15	NA	124295092	124316024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_124295637_124311817_124311928_124314191
transcript_51678.known	chr12	+	4262	5	FSM	ENSG00000179195.16	ENST00000392404.7	4262	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	5.61248608016091	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGTGCTTGACATGTAG	123967942	True	NA	16	True	AATAAA	-17	NA	123973211	124015426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_123973304_123973885_123974021_123988045_123988139_124011380_124011442_124011545
transcript_51679.known	chr12	+	4312	5	FSM	ENSG00000179195.16	ENST00000337815.9	4312	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	4.43705983732471	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCTTGACATGTAGT	123967945	True	NA	17	True	AATAAA	-18	NA	123973214	124015427	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_123973353_123973885_123974021_123988042_123988139_124011380_124011442_124011545
transcript_51680.known	chr12	+	4321	5	FSM	ENSG00000179195.16	ENST00000538932.6	4321	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	7.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTAGTTGTGTGAATTCA	123967945	True	NA	29	True	AATAAA	-30	NA	123973214	124015439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_123973353_123973885_123974021_123988045_123988139_124011380_124011442_124011545
transcript_51681.known	chr12	-	2790	5	FSM	ENSG00000119242.9	ENST00000238156.8	2790	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	5.21416340365355	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTTAAGTGGCTGATTT	-123972566	True	NA	NA	False	ATTAAA	-33	NA	123972831	123935625	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_123937831_123942743_123942786_123943346_123943494_123944271_123944365_123972528
transcript_51682.known	chr12	+	455	4	FSM	ENSG00000179195.16	ENST00000543017.5	455	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	9.41629792788369	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATTACTCTACAAGAGGAA	123968003	True	NA	NA	False	NA	NA	NA	123973272	124011773	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_123973304_123973885_123974021_124011380_124011442_124011545
transcript_51683.known	chr12	+	567	4	FSM	ENSG00000179195.16	ENST00000541448.5	567	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	13.4742552876052	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCTACAAGAGGAAGATTC	123967945	True	NA	NA	False	NA	NA	NA	123973214	124011778	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_123973353_123973885_123974021_124011380_124011442_124011545
transcript_51684.known	chr12	-	1790	4	FSM	ENSG00000119242.9	ENST00000545891.5	1790	4	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_3	4.02768199119819	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACAAACTTTATTTTCTA	-123972469	True	NA	-28	True	NA	NA	NA	123972734	123936435	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_123937831_123942743_123942786_123943346_123943494_123972528
transcript_51685.known	chr12	+	802	2	FSM	ENSG00000179195.16	ENST00000542820.5	802	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCAGAGTAGTACATTTT	123967949	True	NA	NA	False	ATTAAA	-22	NA	123973218	123974553	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_123973353_123973885
transcript_51701.known	chr12	-	3070	13	FSM	ENSG00000073060.17	ENST00000680982.1	3070	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_12	165.873508533862	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTGGAGCCATCTAAAAG	-124859161	True	NA	NA	False	CATAAA	-30	NA	124863896	124777211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_124778587_124786356_124786504_124787405_124787458_124795194_124795269_124800123_124800243_124807760_124807928_124810173_124810290_124811869_124811966_124814201_124814406_124814972_124815115_124817549_124817708_124862379_124862498_124863594
transcript_51703.known	chr12	-	3405	13	FSM	ENSG00000073060.17	ENST00000261693.11	3405	13	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	157.609926365343	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTTTTTATTTCTTG	-124859129	True	NA	NA	False	CATAAA	-19	NA	124863864	124776855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_124778587_124782682_124782812_124786356_124786504_124787405_124787458_124795194_124795269_124800123_124800243_124807760_124807928_124810173_124810290_124811869_124811966_124814201_124814406_124814972_124815115_124817549_124817708_124863594
transcript_51704.known	chr12	-	1597	13	FSM	ENSG00000073060.17	ENST00000546215.5	1597	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	163.851283350347	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGGACAGCCCCCCAGC	-124859048	False	NA	NA	False	NA	NA	NA	124863783	124778498	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_124778587_124782682_124782812_124786440_124786504_124787405_124787458_124795194_124795269_124800123_124800243_124807760_124807928_124810173_124810290_124811869_124811966_124814201_124814406_124814972_124815115_124817549_124817708_124863594
transcript_51705.known	chr12	-	2731	12	FSM	ENSG00000073060.17	ENST00000415380.6	2731	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	134.335647226276	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATGCCTGCCTCTGTGA	-124859111	True	NA	-9	True	AATAAA	-13	NA	124863846	124777632	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_124778587_124786106_124786504_124787405_124787458_124795194_124795269_124800123_124800243_124807760_124807928_124810173_124810290_124811869_124811966_124814201_124814406_124814972_124815115_124817549_124817708_124863594
transcript_51706.known	chr12	-	2897	12	FSM	ENSG00000073060.17	ENST00000680596.1	2897	12	0	0	0	0	multi-exon	FALSE	canonical	1	22	junction_7	128.652006758446	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTGGAGCCATCTAAAAG	-124859130	True	NA	NA	False	CATAAA	-30	NA	124863865	124777211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_124778587_124786356_124786504_124787405_124787458_124795194_124795269_124800123_124800243_124807760_124807928_124810173_124810266_124811869_124811966_124814201_124814406_124814972_124815115_124817549_124817708_124863594
transcript_51707.known	chr12	-	2972	12	FSM	ENSG00000073060.17	ENST00000680926.1	2972	12	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_5	131.901541040754	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTGGAGCCATCTAAAAG	-124859186	True	NA	NA	False	CATAAA	-30	NA	124863921	124777211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_124778587_124786356_124786504_124787405_124787458_124795194_124795269_124800123_124800243_124807765_124807928_124810173_124810290_124811869_124811966_124814201_124814406_124814972_124815115_124817549_124817708_124863594
transcript_51710.nnic	chr12	-	2546	12	NIC	ENSG00000073060.17	novel	2731	12	NA	NA	-27	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	132.940177933877	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATGCCTGCCTCTGTGA	NA	False	NA	-9	True	AATAAA	-13	NA	124863995	124777632	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_124778587_124786440_124786504_124787405_124787458_124795194_124795269_124800123_124800243_124807760_124807928_124810173_124810290_124811869_124811966_124814201_124814406_124814972_124815115_124817549_124817708_124863594
transcript_51728.known	chr12	-	2779	10	FSM	ENSG00000073060.17	ENST00000680556.1	2779	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	148.640505919483	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTGGAGCCATCTAAAAG	-124859186	True	NA	NA	False	CATAAA	-30	NA	124863921	124777211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_124778587_124786356_124786504_124787405_124787458_124807765_124807928_124810173_124810290_124811869_124811966_124814201_124814406_124814972_124815115_124817549_124817708_124863594
transcript_51736.known	chr12	-	2193	2	FSM	ENSG00000150991.16	ENST00000339647.6	2193	2	0	0	0	0	multi-exon	FALSE	canonical	3	1693	junction_1	0	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTTTTTTTTTTTTTT	-124889536	True	NA	-5	True	AATAAA	-17	NA	124914650	124911645	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_124913775_124914586
transcript_51745.known	chr12	-	4559	27	FSM	ENSG00000150990.9	ENST00000308736.7	4559	27	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_11	21.1101997277235	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTGTTGTGGAATGCAC	-124981717	True	NA	-2	True	AATAAA	-17	NA	124989131	124946825	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_124947888_124948083_124948182_124949985_124950060_124950148_124950244_124950412_124950551_124950689_124950805_124952397_124952571_124953879_124953997_124954086_124954212_124956690_124956880_124957028_124957136_124960311_124960424_124964393_124964627_124964929_124965007_124965667_124965813_124966792_124966879_124967122_124967219_124968533_124968649_124968866_124968969_124971301_124971416_124972502_124972600_124975418_124975512_124977341_124977491_124980489_124980839_124982510_124982624_124986095_124986266_124988916
transcript_51750.nnic	chr12	-	4468	26	NIC	ENSG00000150990.9	novel	4559	27	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_21	39.5954340802068	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTGTTGTGGAATGCAC	-124981719	True	NA	-2	True	AATAAA	-17	NA	124989133	124946825	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_-_124947888_124948083_124948182_124949985_124950060_124950148_124950244_124950412_124950551_124950689_124950805_124952397_124952571_124953879_124953997_124954086_124954212_124956690_124956880_124957028_124957136_124960311_124960424_124964393_124964627_124964929_124965007_124965667_124965813_124966792_124966879_124967122_124967219_124968533_124968649_124968866_124968969_124971301_124971416_124972502_124972600_124977341_124977491_124980489_124980839_124982510_124982624_124986095_124986266_124988916
transcript_51760.known	chr12	-	2806	18	FSM	ENSG00000150990.9	ENST00000679875.1	2806	18	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_2	13.8686372923233	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTACATGCTAATTCTTAGA	-124981680	True	NA	NA	False	NA	NA	NA	124989094	124956409	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_124956880_124957028_124957136_124960311_124960424_124964393_124964627_124964929_124965007_124965667_124965813_124966792_124966879_124967122_124967219_124968533_124968649_124968866_124968969_124971301_124971416_124972502_124972600_124975418_124975512_124977341_124977491_124980489_124980839_124982510_124982624_124986095_124986266_124988916
transcript_51770.known	chr12	+	1911	3	FSM	ENSG00000184992.13	ENST00000672415.1	1911	3	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_2	11.5	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGAAATCTGTTGTGTCC	124991936	True	NA	NA	False	NA	NA	NA	124993704	125026499	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_124994004_125012533_125012637_125024990
transcript_51776.known	chr12	+	3256	18	FSM	ENSG00000081760.17	ENST00000316519.11	3256	18	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_11	14.8235294117647	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATGCTGTGTGTGCAGTG	125060644	True	NA	10	True	AATAAA	-23	NA	125065434	125143316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_125065718_125073875_125073980_125076490_125076612_125086329_125086444_125091425_125091524_125102678_125102794_125102999_125103082_125107120_125107269_125114476_125114558_125118640_125118766_125124704_125124770_125124901_125125025_125128160_125128275_125129334_125129461_125134002_125134073_125134793_125134853_125136661_125136865_125142091
transcript_51781.nic	chr12	+	3127	17	NIC	ENSG00000081760.17	novel	3256	18	NA	NA	-70	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_16	31.35258163214	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGTGTGTGCAGTGTGC	125060573	True	NA	13	True	AATAAA	-26	NA	125065363	125143319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_125065718_125073875_125073980_125076490_125076612_125086329_125086444_125091425_125091524_125102678_125102794_125102999_125103082_125107120_125107269_125114476_125114558_125118640_125118766_125124704_125124770_125124901_125125025_125128160_125128275_125129334_125129461_125134002_125134073_125134793_125134853_125142091
transcript_51796.nic	chr12	+	2574	12	NIC	ENSG00000081760.17	novel	3256	18	NA	NA	-70	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_9	54.2123160048671	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGTGTGTGCAGTGTGC	125060573	True	NA	13	True	AATAAA	-26	NA	125065363	125143319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_125065718_125073875_125073980_125076490_125076612_125086329_125086444_125091425_125091524_125102678_125102794_125102999_125103082_125107120_125107269_125114476_125114558_125134002_125134073_125134793_125134853_125142091
transcript_51799.known	chr12	-	2751	8	FSM	ENSG00000139370.12	ENST00000266771.10	2751	8	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_7	10.2260172389562	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCCGGTTCTTTGCGTGG	-128823703	True	NA	-2	True	TATAAA	-24	NA	128823958	128793193	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_128794357_128799258_128799418_128800853_128801010_128808787_128808957_128809395_128809474_128809942_128810112_128814774_128815071_128823397
transcript_51800.known	chr12	-	2402	7	FSM	ENSG00000139370.12	ENST00000376744.8	2402	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	27.4873708374511	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGCCGGTTCTTTGCGTG	-128823524	False	NA	-3	True	TATAAA	-23	NA	128823779	128793194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_128794357_128799258_128799418_128800853_128801010_128808787_128808957_128809395_128809474_128814774_128815071_128823397
transcript_51802.known	chr12	+	2995	12	FSM	ENSG00000151948.12	ENST00000442111.6	2995	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	4.29298871022458	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATACGAAAATAGCCTCT	128853348	True	NA	15	True	AATAAA	-15	NA	128853493	128984956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_128853650_128875913_128876063_128888638_128888745_128899235_128899288_128912423_128912461_128914932_128914990_128926358_128926455_128927104_128927155_128945325_128945370_128947337_128947459_128957544_128957644_128982928
transcript_51805.known	chr12	+	2783	8	FSM	ENSG00000151948.12	ENST00000281703.11	2783	8	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_4	4.10077145554495	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTCTCTTTCTTCCCAC	128853332	True	NA	27	True	AATAAA	-27	NA	128853477	128984968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_128853650_128875913_128876063_128888638_128888745_128899235_128899288_128945325_128945370_128947337_128947459_128957544_128957644_128982928
transcript_51809.known	chr12	+	3282	1	FSM	ENSG00000111432.5	ENST00000539839.1	3282	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTGGTTCATGGTGAGG	130162299	True	NA	14	True	AATAAA	-24	NA	130162458	130165740	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_130162500_130165700
transcript_5181.known	chr1	-	2125	7	FSM	ENSG00000198746.13	ENST00000361720.10	2125	7	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	7.55902698029904	220	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCTTACTTTTCTAATT	-26899254	True	NA	-16	True	AATAAA	-17	NA	26900467	26890487	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_26891227_26892410_26892539_26892669_26892792_26893388_26893449_26894235_26894411_26897300_26897726_26899991
transcript_51818.known	chr12	-	3441	11	FSM	ENSG00000111450.14	ENST00000392373.7	3441	11	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_8	29.1753320460968	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTCTTGTGGCTGTTACT	-130837292	True	NA	-15	True	AATAAA	-18	NA	130839250	130789599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_130791978_130795994_130796121_130798524_130798636_130801152_130801291_130801414_130801489_130806981_130807091_130808630_130808705_130812956_130813032_130821688_130821789_130827192_130827268_130839069
transcript_51824.known	chr12	-	3331	10	FSM	ENSG00000111450.14	ENST00000261653.10	3331	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	50.1363572768072	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTCTTGTGGCTGTTACT	-130837308	True	NA	-15	True	AATAAA	-18	NA	130839266	130789599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_130791978_130798524_130798636_130801152_130801291_130801414_130801489_130806981_130807091_130808630_130808705_130812956_130813032_130821688_130821789_130827192_130827268_130839069
transcript_51829.nic	chr12	-	965	9	ISM	ENSG00000111450.14	ENST00000261653.10	3331	10	-42	8955	-42	-162	5prime_fragment	FALSE	canonical	3	115	junction_6	30.1081384346492	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTATCAAATATCAGAGCAA	-130837350	True	NA	NA	False	AAGAAA	-9	NA	130839308	130798554	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_130798636_130801152_130801291_130801414_130801489_130806981_130807091_130808630_130808705_130812956_130813032_130821688_130821789_130827192_130827268_130839069
transcript_51835.nic	chr12	-	407	3	ISM	ENSG00000111450.14	ENST00000261653.10	3331	10	-42	32096	-42	-20442	5prime_fragment	FALSE	canonical	3	147	junction_1	1	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGAAGTAAGTTGTTGGT	-130837350	True	NA	-5	True	AGTAAA	-38	NA	130839308	130821695	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_130821789_130827192_130827268_130839069
transcript_51838.known	chr12	+	2474	7	FSM	ENSG00000132341.12	ENST00000543796.6	2474	7	0	0	0	0	multi-exon	FALSE	canonical	3	11113	junction_1	1334.10244484197	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTGAATCATCTCTAGT	130716725	True	NA	36	True	AATATA	-21	NA	130872065	130877678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_130872127_130872583_130872630_130872835_130872921_130873002_130873129_130874545_130874734_130875611_130875783_130875881
transcript_51843.known	chr12	+	1475	6	FSM	ENSG00000132341.12	ENST00000541630.5	1475	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	7085.33763768531	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAATTCTTGCTGTTAAAA	130716725	True	NA	110	True	NA	NA	NA	130872065	130876733	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_130872127_130872835_130872913_130873002_130873129_130874545_130874734_130875611_130875783_130875881
transcript_51846.known	chr12	+	2455	6	FSM	ENSG00000132341.12	ENST00000448750.7	2455	6	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	5759.86660956658	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTTGAATCATCTCTA	130716696	True	NA	34	True	AATATA	-19	NA	130872036	130877676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_130872127_130872835_130872921_130873002_130873129_130874545_130874734_130875611_130875783_130875881
transcript_51856.known	chr12	+	3246	18	FSM	ENSG00000061936.10	ENST00000261674.9	3246	18	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_2	36.6293508345501	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCGTGGTTTCTTCCT	131707422	True	NA	17	True	AATAAA	-29	NA	131711089	131799738	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_131711448_131714070_131714241_131714821_131714954_131719453_131719540_131725404_131725631_131726939_131727053_131728292_131728429_131753122_131753364_131754367_131754500_131755385_131755480_131756472_131756645_131764455_131764687_131766117_131766309_131778064_131778331_131786462_131786589_131797177_131797361_131799036_131799110_131799422
transcript_51860.nic	chr12	+	2622	14	ISM	ENSG00000061936.10	ENST00000538548.5	2636	15	-256	8402	-247	0	5prime_fragment	FALSE	canonical	3	15	junction_2	38.2981143417033	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAGCACAAAAAAAGAT	NA	False	NA	27	True	AAGAAA	-8	NA	131710833	131778195	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_131711448_131714070_131714194_131714821_131714954_131719453_131719540_131725404_131725631_131726939_131727053_131728292_131728429_131753122_131753364_131754367_131754500_131755385_131755480_131756472_131756645_131764455_131764687_131766117_131766309_131778064
transcript_51863.nic	chr12	+	2424	14	ISM	ENSG00000061936.10	ENST00000541286.5	3219	19	-58	21407	-2	0	5prime_fragment	FALSE	canonical	3	109	junction_2	19.9982247732853	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAGCACAAAAAAAGAT	131707411	True	NA	27	True	AAGAAA	-8	NA	131711078	131778195	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_131711448_131714070_131714241_131714821_131714954_131719453_131719540_131725404_131725631_131726939_131727053_131728292_131728429_131753122_131753364_131754367_131754500_131755385_131755480_131756472_131756645_131764455_131764687_131766117_131766309_131778064
transcript_51865.nic	chr12	+	2193	13	NIC	ENSG00000061936.10	novel	3246	18	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_11	39.3872335492945	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAGCACAAAAAAAGAT	131707411	True	NA	27	True	AAGAAA	-8	NA	131711078	131778195	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_131711448_131714070_131714241_131714821_131714954_131719453_131719540_131725404_131725631_131726939_131727053_131728292_131728429_131753122_131753364_131754367_131754500_131755385_131755480_131756472_131756645_131766117_131766309_131778064
transcript_51867.nic	chr12	+	2994	13	NIC	ENSG00000061936.10	novel	3246	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	110	junction_1	18.7058740031633	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAGCACAAAAAAAGAT	131707422	True	NA	27	True	AAGAAA	-8	NA	131711089	131778195	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_131711448_131714070_131714954_131719453_131719540_131725404_131725631_131726939_131727053_131728292_131728429_131753122_131753364_131754367_131754500_131755385_131755480_131756472_131756645_131764455_131764687_131766117_131766309_131778064
transcript_51871.nic	chr12	+	962	5	ISM	ENSG00000061936.10	ENST00000541286.5	3219	19	-58	73993	-2	0	5prime_fragment	FALSE	canonical	3	109	junction_2	18.1727818453862	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAAGTGACGAGAAAAAA	131707411	True	NA	NA	False	NA	NA	NA	131711078	131725609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_131711448_131714070_131714241_131714821_131714954_131719453_131719540_131725404
transcript_51873.nnic	chr12	+	722	4	NNC	ENSG00000061936.10	novel	1576	3	NA	NA	-74	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	87.1869001373231	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGGCGTGGTTTCTTCC	NA	False	NA	16	True	AATAAA	-28	NA	131796043	131799737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_131796195_131797177_131797361_131799036_131799110_131799422
transcript_51882.known	chr12	+	2411	10	FSM	ENSG00000198598.7	ENST00000360564.5	2411	10	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_8	62.0025885560782	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGCGGCTCGGCTGGGCTC	131825138	True	NA	7	True	NA	NA	NA	131828392	131851771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_131828654_131838194_131838328_131838611_131838742_131840572_131840857_131841623_131841801_131843996_131844082_131845117_131845201_131845296_131845450_131849801_131850060_131850924
transcript_51883.known	chr12	+	1870	10	FSM	ENSG00000198598.7	ENST00000535004.2	1870	10	0	0	0	0	multi-exon	TRUE	canonical	3	185	junction_8	51.7918435830237	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCGGGATGAGGACGGGCCA	131825138	True	NA	NA	False	NA	NA	NA	131828392	131851367	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_131828654_131838194_131838328_131838611_131838742_131840572_131840857_131841623_131841801_131843996_131844082_131845117_131845201_131845296_131845450_131849938_131850060_131850924
transcript_51888.known	chr12	+	2301	9	FSM	ENSG00000198598.7	ENST00000535291.5	2301	9	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_7	65.485566157742	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTCCCTGGTGCTCCA	131838045	False	NA	19	True	NA	NA	NA	131838055	131851783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_131838328_131838611_131838742_131840572_131840857_131841623_131841801_131843996_131844082_131845117_131845201_131845296_131845450_131849801_131850060_131850924
transcript_51892.nnic	chr12	+	2202	7	NIC	ENSG00000177192.14	novel	4041	6	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_4	92.7495133260667	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGGTTTGCCTTTTTCT	131929178	False	NA	15	True	ATTAAA	-25	NA	131929189	131943859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_131929797_131929906_131930136_131932174_131932313_131932721_131932834_131939172_131939276_131941291_131941984_131943538
transcript_51896.known	chr12	+	4041	6	FSM	ENSG00000177192.14	ENST00000376649.8	4041	6	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	43.2989607265579	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCCTTTCATTCTCTAAT	131917842	True	NA	5	True	AATAAA	-19	NA	131929275	131945896	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_131929797_131929906_131930136_131932174_131932313_131939172_131939276_131941291_131941984_131943538
transcript_51901.known	chr12	+	1664	6	FSM	ENSG00000177192.14	ENST00000443358.6	1664	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	78.2953383031199	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGGTTTGCCTTTTTCT	131917766	True	NA	15	True	ATTAAA	-25	NA	131929199	131943859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_131929381_131929906_131930136_131932174_131932313_131939172_131939276_131941291_131941984_131943538
transcript_51904.nic	chr12	+	3645	5	ISM	ENSG00000177192.14	ENST00000376649.8	4041	6	-86	2037	-10	0	intron_retention	FALSE	canonical	3	133	junction_1	33.7971892322424	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGGTTTGCCTTTTTCT	131929178	False	NA	15	True	ATTAAA	-25	NA	131929189	131943859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_131929797_131929906_131930136_131932174_131932313_131939172_131939276_131941291
transcript_51906.nnic	chr12	+	1987	5	NIC	ENSG00000177192.14	novel	4041	6	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	91.0257518507812	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGGTTTGCCTTTTTCT	131929178	False	NA	15	True	ATTAAA	-25	NA	131929189	131943859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_131929797_131929906_131930136_131932174_131932313_131941291_131941984_131943538
transcript_51919.nnic	chr12	+	2814	10	NNC	ENSG00000183495.14	novel	3092	13	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	19.5075167532042	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGAAGGCCTTAAATTTA	131944165	True	NA	23	True	AATAAA	-27	NA	131949946	131990675	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_131950037_131960584_131961955_131963531_131963643_131979696_131979785_131981488_131981597_131982092_131982479_131986513_131986808_131987704_131987891_131989963_131990105_131990635
transcript_51926.nnic	chr12	+	2733	9	NNC	ENSG00000183495.14	novel	3092	13	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	13.9351175093718	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGAAGGCCTTAAATTTA	131944135	True	NA	23	True	AATAAA	-27	NA	131949916	131990675	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_131950037_131960584_131961955_131979696_131979785_131981488_131981597_131982092_131982479_131986513_131986808_131987704_131987891_131989963_131990105_131990635
transcript_51928.nic	chr12	+	2799	9	NIC	ENSG00000183495.14	novel	3092	13	NA	NA	-82	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	10.917302780449	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGAAGGCCTTAAATTTA	131949840	False	NA	23	True	AATAAA	-27	NA	131949859	131990675	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_131950037_131960584_131961955_131979696_131979794_131981488_131981597_131982092_131982479_131986513_131986808_131987704_131987891_131989963_131990105_131990635
transcript_51932.nnic	chr12	+	2605	8	NNC	ENSG00000183495.14	novel	2588	8	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	14.8296448826983	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGAAGGCCTTAAATTTA	131944155	True	NA	23	True	AATAAA	-27	NA	131949936	131990675	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_131950037_131960584_131961955_131979696_131979785_131982092_131982479_131986513_131986808_131987704_131987891_131989963_131990105_131990635
transcript_51934.known	chr12	+	2588	8	FSM	ENSG00000183495.14	ENST00000332482.8	2588	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	11.8287094539911	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGAAGGCCTTAAATTTA	131944181	True	NA	23	True	AATAAA	-27	NA	131949962	131990675	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_131950037_131960584_131961955_131979696_131979794_131982092_131982479_131986513_131986808_131987704_131987891_131989963_131990105_131990635
transcript_51945.known	chr12	+	12289	53	FSM	ENSG00000183495.14	ENST00000389561.7	12289	53	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_17	23.6077020202	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTCATTTTGTCTTTCA	131944160	True	NA	11	True	AATAAA	-17	NA	131949941	132080460	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_131950037_131960584_131961955_131979693_131979794_131981488_131981597_131982092_131982479_131986513_131986808_131987704_131987891_131989963_131990105_131990635_131990715_131991406_131991457_131992172_131992231_131994866_131994957_132005076_132005185_132006111_132006303_132006699_132006878_132011497_132011635_132013008_132013179_132013489_132013665_132013776_132013914_132017534_132017722_132018209_132018377_132020048_132020219_132021078_132021322_132023776_132023942_132025645_132025805_132027436_132027532_132028016_132028289_132029700_132029904_132029988_132030159_132031952_132032150_132037681_132037794_132037952_132038097_132043303_132043463_132043644_132043729_132044176_132044312_132044670_132044716_132044799_132044954_132045318_132045561_132045726_132045901_132050322_132050460_132050598_132050656_132053145_132053225_132053342_132053598_132054973_132055020_132055098_132055209_132062109_132062324_132062465_132062702_132064667_132064887_132066773_132066970_132067361_132067487_132069494_132069642_132076515_132076594_132077400
transcript_51961.known	chr12	+	861	3	FSM	ENSG00000185684.16	ENST00000537558.6	869	3	8	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	14	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTACTGTATTGTACGC	132082818	True	NA	19	True	AATAAA	-33	NA	132084284	132085797	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_132084400_132084963_132085317_132085404
transcript_51962.nic	chr12	+	489	2	ISM	ENSG00000185684.16	ENST00000539351.5	564	3	-33	200	-18	-200	5prime_fragment	FALSE	canonical	3	40	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGGGTGAGTATTTCCT	132082790	True	NA	4	True	AATAAA	-19	NA	132084256	132085309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_+_132084400_132084963
transcript_51968.known	chr12	-	4702	15	FSM	ENSG00000185163.10	ENST00000397333.4	4702	15	0	0	0	0	multi-exon	TRUE	canonical	3	92	junction_7	22.0181974831766	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCACTGTGTGTGTGTGTGT	-132141509	True	NA	-5	True	ATTAAA	-14	NA	132144319	132136593	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_132139299_132139634_132139770_132139860_132139925_132140097_132140200_132140422_132140540_132140619_132140736_132140830_132141021_132141274_132141421_132141497_132141607_132141849_132141957_132142118_132142191_132142276_132142423_132142727_132142879_132143694_132143910_132143992
transcript_51977.nnic	chr12	-	2813	15	NNC	ENSG00000185163.10	novel	4702	15	NA	NA	-36	630	at_least_one_novel_splicesite	TRUE	canonical	3	8	junction_14	41.7404516760714	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTAGCCGGGCGTGGTGG	-132141545	True	NA	NA	False	AATACA	-16	NA	132144355	132138482	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_132139299_132139634_132139770_132139860_132139925_132140097_132140200_132140422_132140540_132140619_132140736_132140830_132141021_132141274_132141421_132141497_132141607_132141849_132141957_132142118_132142191_132142276_132142423_132142727_132142879_132143694_132143874_132143992
transcript_51999.nnic	chr12	-	2510	15	NNC	ENSG00000185163.10	novel	4702	15	NA	NA	-36	327	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_14	41.7404516760714	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCAGGCGTGGTGGTGC	-132141545	True	NA	-33	True	AATACA	-4	NA	132144355	132138785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_132139299_132139634_132139770_132139860_132139925_132140097_132140200_132140422_132140540_132140619_132140736_132140830_132141021_132141274_132141421_132141497_132141607_132141849_132141957_132142118_132142191_132142276_132142423_132142727_132142879_132143694_132143874_132143992
transcript_52.known	ERCC-00144	+	521	1	FSM	ERCC-00144A	DQ854995	521	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00144_+_0_500
transcript_52005.nnic	chr12	-	2290	15	NNC	ENSG00000185163.10	novel	4702	15	NA	NA	-36	107	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_14	41.7404516760714	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTCCCAGACGGACGCGG	-132141545	True	NA	-29	True	AGTAAA	-11	NA	132144355	132139005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_-_132139299_132139634_132139770_132139860_132139925_132140097_132140200_132140422_132140540_132140619_132140736_132140830_132141021_132141274_132141421_132141497_132141607_132141849_132141957_132142118_132142191_132142276_132142423_132142727_132142879_132143694_132143874_132143992
transcript_5201.nnic	chr1	-	1970	5	NNC	ENSG00000175707.10	novel	1855	4	NA	NA	-16	-3	at_least_one_novel_splicesite	TRUE	canonical	3	28	junction_4	101.625230627045	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGGTATCTGCCTGCTT	-26959351	True	NA	-20	True	NA	NA	NA	26960484	26949564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_26950152_26950681_26950757_26951341_26952413_26953845_26953948_26960349
transcript_5205.known	chr1	-	1855	4	FSM	ENSG00000175707.10	ENST00000320567.6	1855	4	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_3	50.7302232949507	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTATCTGCCTGCTTTCT	-26959335	True	NA	-17	True	NA	NA	NA	26960468	26949561	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_26950152_26950681_26950757_26951341_26952413_26960349
transcript_5208.nic	chr1	-	2318	3	NIC	ENSG00000175707.10	novel	1855	4	NA	NA	62	-5	intron_retention	FALSE	canonical	3	132	junction_2	42.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAATTGGTATCTGCCTGC	-26959273	True	NA	-22	True	NA	NA	NA	26960406	26949566	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_26950757_26951341_26952413_26960349
transcript_5210.known	chr1	-	2382	2	FSM	ENSG00000158246.8	ENST00000289166.6	2382	2	0	0	0	0	multi-exon	TRUE	canonical	3	1094	junction_1	0	2928	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTAGTGCCATGCTTCCTC	-27000945	True	NA	-4	True	AATAAA	-17	NA	27012850	27005019	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_27006958_27012406
transcript_5211.known	chr1	-	4737	12	FSM	ENSG00000090020.11	ENST00000263980.8	4737	12	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_10	9.49728103761482	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAAGGGCTGCTTTCTGGG	-27150680	True	NA	NA	False	AATAAA	-22	NA	27155125	27098808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_27100645_27101202_27101276_27101724_27101827_27102015_27102131_27102384_27102559_27102672_27102744_27103222_27103313_27105884_27106088_27107647_27107866_27109526_27109778_27113825_27114287_27153982
transcript_52115.known	chr12	+	1650	15	FSM	ENSG00000184967.7	ENST00000330579.6	1650	15	0	0	0	0	multi-exon	TRUE	canonical	3	312	junction_5	34.7269230378027	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGCTCAGGGAGTGTGG	132135725	True	NA	7	True	AATAAA	-14	NA	132144456	132152468	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_132144606_132144853_132144975_132145558_132145666_132147280_132147389_132147632_132147783_132147879_132147980_132148071_132148107_132148608_132148660_132148783_132148896_132150980_132151042_132151257_132151369_132151483_132151645_132151737_132151821_132152083_132152198_132152281
transcript_5213.known	chr1	-	2183	5	FSM	ENSG00000090020.11	ENST00000374086.3	2183	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	8.20060973342836	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATACCTGTAATTCCAG	-27154586	False	NA	NA	False	AATACA	-19	NA	27154598	27105450	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_27106088_27107647_27107866_27109526_27109778_27113825_27114287_27153982
transcript_52130.known	chr12	-	1484	2	FSM	ENSG00000256576.3	ENST00000538731.3	1517	2	33	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACCGGCTGGTATTTCC	-132189501	True	NA	2	True	ATTAAA	-28	NA	132189695	132186734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_132187702_132189178
transcript_52140.known	chr12	+	1793	1	FSM	ENSG00000277011.1	ENST00000613430.1	1793	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGATGTGGCTGAGGTG	132282726	True	NA	4	True	AATAAA	-15	NA	132282813	132284606	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_132282800_132284600
transcript_52142.known	chr12	+	1355	1	FSM	ENSG00000279700.1	ENST00000622917.1	1355	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAAACTAGGAGGGA	132565057	False	NA	NA	False	AAAAAG	-3	NA	132565070	132566425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_132565100_132566400
transcript_52143.known	chr12	+	4219	1	FSM	ENSG00000280287.1	ENST00000624087.1	4219	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAAAAAAATGTGC	NA	False	NA	NA	False	NA	NA	NA	132550728	132554947	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_132550700_132554900
transcript_52145.known	chr12	-	7823	49	FSM	ENSG00000177084.18	ENST00000320574.10	7823	49	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_36	43.6873311076055	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGGTTGTCACTGTGTAT	-132680742	True	NA	NA	False	NA	NA	NA	132687342	132623761	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_132624811_132624904_132624995_132625644_132625771_132626116_132626318_132632314_132632509_132632663_132632796_132634185_132634379_132635891_132636025_132638013_132638140_132639124_132639299_132641646_132641852_132642176_132642398_132642505_132642730_132642819_132642997_132643223_132643331_132643406_132643561_132643836_132643978_132648928_132649073_132649305_132649516_132649676_132649890_132657135_132657259_132657348_132657430_132657867_132657971_132659294_132659510_132660968_132661165_132661526_132661685_132664003_132664149_132664369_132664463_132665301_132665451_132667502_132667649_132668355_132668503_132668634_132668738_132668810_132668940_132672214_132672323_132672626_132672840_132673163_132673278_132673574_132673708_132675397_132675518_132675734_132675821_132676093_132676205_132676545_132676654_132677362_132677444_132677577_132677720_132679496_132679652_132679953_132680047_132680177_132680223_132680606_132680688_132681137_132681280_132687253
transcript_52158.nnic	chr12	+	2299	7	NNC	ENSG00000247077.7	novel	2811	6	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	101.322367827752	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTAGTTGTGAGTGTGTT	132698899	True	NA	16	True	AATAAA	-25	NA	132710773	132722734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_132711068_132714857_132715037_132717438_132717565_132717709_132717799_132717986_132718121_132720677_132721275_132721854
transcript_52162.nnic	chr12	+	2365	7	NNC	ENSG00000247077.7	novel	2811	6	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	101.322367827752	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTAGTTGTGAGTGTGTT	132698908	True	NA	16	True	AATAAA	-25	NA	132710782	132722734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_132711068_132714857_132715037_132717438_132717565_132717709_132717799_132717986_132718121_132720677_132721309_132721813
transcript_52163.nnic	chr12	+	2316	7	NNC	ENSG00000247077.7	novel	2811	6	NA	NA	-51	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	101.322367827752	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTAGTTGTGAGTGTGTT	132698893	True	NA	16	True	AATAAA	-25	NA	132710767	132722734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_132711068_132714857_132715037_132717438_132717565_132717709_132717799_132717986_132718121_132720677_132721319_132721887
transcript_52164.nnic	chr12	+	2504	7	NNC	ENSG00000247077.7	novel	2811	6	NA	NA	-192	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	101.322367827752	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTAGTTGTGAGTGTGTT	132710609	True	NA	16	True	AATAAA	-25	NA	132710626	132722734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_132711068_132714857_132715037_132717438_132717565_132717709_132717799_132717986_132718121_132720677_132721332_132721853
transcript_52165.nnic	chr12	+	2413	7	NNC	ENSG00000247077.7	novel	2811	6	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	101.322367827752	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTAGTTGTGAGTGTGTT	132698921	True	NA	16	True	AATAAA	-25	NA	132710795	132722734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_132711068_132714857_132715037_132717438_132717565_132717709_132717799_132717986_132718121_132720677_132721370_132721813
transcript_52166.nnic	chr12	+	1777	7	NNC	ENSG00000247077.7	novel	2811	6	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	101.322367827752	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTAGTTGTGAGTGTGTT	132698911	True	NA	16	True	AATAAA	-25	NA	132710785	132722734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_132711068_132714857_132715037_132717438_132717565_132717709_132717799_132717986_132718121_132720677_132721371_132722460
transcript_5217.known	chr1	+	4275	16	FSM	ENSG00000142784.16	ENST00000361771.7	4275	16	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_10	21.3485362495886	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTGGTGGCATTTGTG	27234206	False	NA	16	True	ATTAAA	-17	NA	27234667	27308244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27234952_27260955_27261103_27263151_27263236_27282238_27282286_27283337_27283450_27287673_27287862_27292214_27292398_27294021_27294117_27294513_27294630_27296325_27296402_27297050_27297157_27297937_27298112_27301225_27301462_27303620_27303796_27305000_27305194_27306185
transcript_52170.nnic	chr12	+	2761	7	NNC	ENSG00000247077.7	novel	2811	6	NA	NA	-192	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	101.322367827752	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTAGTTGTGAGTGTGTT	132710609	True	NA	16	True	AATAAA	-25	NA	132710626	132722734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_132711068_132714857_132715037_132717438_132717565_132717709_132717799_132717986_132718121_132720677_132721454_132721718
transcript_52171.nnic	chr12	+	1948	7	NNC	ENSG00000247077.7	novel	2811	6	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	101.322367827752	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTAGTTGTGAGTGTGTT	132698902	True	NA	16	True	AATAAA	-25	NA	132710776	132722734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_132711068_132714857_132715037_132717438_132717565_132717709_132717799_132717986_132718121_132720677_132721454_132722381
transcript_52178.known	chr12	+	1182	6	FSM	ENSG00000247077.7	ENST00000317555.6	1182	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	101.959992153785	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCCTCTTCTCTGGATC	132698944	True	NA	NA	False	ACTAAA	-17	NA	132710818	132719166	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_132711068_132714857_132715037_132717438_132717565_132717709_132717799_132717986_132718121_132718761
transcript_52179.known	chr12	+	2811	6	FSM	ENSG00000247077.7	ENST00000498926.7	2811	6	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_4	53.3576611181562	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTAGTTGTGAGTGTGTT	132698967	True	NA	16	True	AATAAA	-25	NA	132710841	132722734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_132711068_132714857_132715037_132717438_132717565_132717709_132717799_132717986_132718121_132720677
transcript_52182.known	chr12	+	970	5	FSM	ENSG00000176894.10	ENST00000317479.8	970	5	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_4	25.2487623459052	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGACTTTAATCTCTCAG	132686418	True	NA	9	True	AATAAA	-21	NA	132687586	132704985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_132687793_132690262_132690377_132695883_132696047_132701249_132701370_132704618
transcript_52188.known	chr12	+	632	3	FSM	ENSG00000176894.10	ENST00000543589.5	632	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	76	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGACTTTAATCTCTCAG	132686473	True	NA	9	True	AATAAA	-21	NA	132687641	132704985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_132687793_132690262_132690377_132704618
transcript_5220.nnic	chr1	+	4139	15	NIC	ENSG00000142784.16	novel	4706	16	NA	NA	0	0	intron_retention	FALSE	canonical	1	4	junction_13	21.537935208864	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTGGTGGCATTTGTG	27234170	True	NA	16	True	ATTAAA	-17	NA	27234631	27308244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_27234952_27260955_27261103_27263151_27263236_27282238_27282286_27283337_27283450_27287673_27287862_27292214_27292398_27294021_27294117_27294513_27294630_27296325_27296402_27297047_27297157_27297937_27298112_27301225_27301462_27305000_27305194_27306185
transcript_52201.known	chr12	-	4590	13	FSM	ENSG00000176915.15	ENST00000357997.10	4590	13	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_4	56.1424280043375	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGCGTGGTAATAATTGCAA	-132754922	True	NA	0	True	AATGAA	-17	NA	132761832	132725502	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_132727444_132728031_132728164_132729678_132730271_132734384_132734576_132735405_132735513_132736892_132737066_132741418_132741486_132743153_132743277_132747831_132748021_132748137_132748332_132750642_132750850_132754674_132755134_132761617
transcript_5222.known	chr1	+	994	8	FSM	ENSG00000186501.15	ENST00000486082.5	994	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_6	129.297000296659	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCTCTCAGAAGCACCCT	27319414	True	NA	NA	False	NA	NA	NA	27322253	27335648	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27322392_27330719_27330805_27330984_27331138_27332069_27332102_27333957_27334055_27334150_27334282_27334666_27334755_27335378
transcript_52221.known	chr12	-	2990	16	FSM	ENSG00000072609.18	ENST00000443047.6	2990	16	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_12	86.4181050989252	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCTCGTGTTGGGCTCGT	-132881459	True	NA	-6	True	AATAAA	-20	NA	132887603	132840351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_132841597_132843010_132843084_132844026_132844135_132847042_132847131_132848084_132848156_132848640_132848725_132851617_132851738_132853430_132853574_132856467_132856631_132857404_132857560_132859067_132859228_132861466_132861635_132872284_132872395_132877554_132877655_132887195_132887341_132887546
transcript_52222.known	chr12	-	2648	18	FSM	ENSG00000072609.18	ENST00000432561.6	2648	18	0	0	0	0	multi-exon	FALSE	canonical	2	49	junction_13	78.1674185880519	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGTATAGTATGGTATTT	-132881464	True	NA	-82	True	AATATA	-27	NA	132887608	132840974	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_132841597_132843010_132843084_132844026_132844135_132847042_132847131_132848084_132848156_132848640_132848725_132851617_132851738_132853430_132853574_132856467_132856631_132857404_132857560_132859067_132859228_132861466_132861635_132869618_132869835_132870723_132870784_132872284_132872395_132877554_132877655_132887195_132887341_132887546
transcript_52223.known	chr12	-	9414	24	FSM	ENSG00000090615.16	ENST00000204726.9	9426	24	0	12	0	0	multi-exon	FALSE	canonical	2	9	junction_23	8.5133054984769	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCATATTCATTGGAAGC	-132826628	True	NA	-15	True	AATAAA	-18	NA	132828869	132768913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_132773295_132774156_132774321_132775140_132775306_132776633_132776757_132776957_132777091_132777665_132777806_132780797_132780915_132782295_132782494_132784163_132784308_132786338_132786556_132786692_132786788_132789026_132789291_132791215_132791294_132795851_132796221_132796538_132796701_132798339_132798478_132801766_132801970_132804715_132805023_132807176_132807289_132807890_132808550_132813306_132813420_132816539_132816813_132821995_132822312_132828326
transcript_52228.nic	chr12	-	2810	12	ISM	ENSG00000090615.16	ENST00000545875.4	3784	16	-64	7370	-35	-2192	5prime_fragment	FALSE	canonical	2	14	junction_11	7.93673330389714	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAACAGTTTCTCCAACAAA	-132828735	False	NA	NA	False	AATAAA	-1	NA	132828904	132791237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_132791294_132795851_132796221_132796538_132796701_132798339_132798478_132801766_132801970_132804715_132805023_132807176_132807289_132807890_132808550_132813306_132813420_132816539_132816813_132821995_132822312_132828802
transcript_52230.nnic	chr12	-	2690	12	ISM	ENSG00000090615.16	ENST00000688114.1	8788	24	-46	22305	-35	-2192	5prime_fragment	FALSE	canonical	2	14	junction_11	8.12708968677346	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAACAGTTTCTCCAACAAA	-132828735	False	NA	NA	False	AATAAA	-1	NA	132828904	132791237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr12_-_132791294_132795851_132796221_132796538_132796701_132798339_132798478_132801766_132801970_132804715_132805023_132807176_132807289_132807890_132808550_132813306_132813420_132816659_132816813_132821995_132822312_132828802
transcript_5224.known	chr1	+	1665	7	FSM	ENSG00000186501.15	ENST00000464720.5	1665	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	118.384495981902	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTGCCCTGTCATTGTT	27319407	True	NA	8	True	AATAAA	-15	NA	27322246	27336400	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27322392_27330719_27330805_27330984_27331138_27332069_27332102_27333957_27334055_27334150_27334282_27335378
transcript_52242.known	chr12	-	9342	5	FSM	ENSG00000196458.11	ENST00000360187.9	9342	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	8.67467578644874	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGGTATCCCCAAATTAAA	-132955483	True	NA	57	True	AATAAA	-19	NA	132956306	132918305	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_132927163_132933034_132933156_132945620_132945798_132948147_132948271_132956242
transcript_52243.known	chr12	-	838	4	FSM	ENSG00000196458.11	ENST00000331711.11	838	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	3.74165738677394	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGCTCACGGTTCATCA	-132955468	True	NA	NA	False	NA	NA	NA	132956291	132926671	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_132927163_132933034_132933156_132945620_132945798_132956242
transcript_52250.nnic	chr12	+	3256	5	NIC	ENSG00000198393.8	novel	834	5	NA	NA	6	436	combination_of_known_splicesites	FALSE	canonical	3	25	junction_2	14.972892172189	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTGTTTGGGTTTTT	132985403	True	NA	3	True	AATAAA	-13	NA	132986372	133012563	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_132986874_132987664_132987769_133007041_133007169_133007436_133007533_133010135
transcript_52252.known	chr12	+	17697	4	FSM	ENSG00000198393.8	ENST00000328654.10	17697	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	13.6707311029399	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCACTGCTCTCTCATTAT	132985397	True	NA	NA	False	ATTAAA	-16	NA	132986366	133027102	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_132986874_133007041_133007169_133007436_133007533_133010135
transcript_52254.nnic	chr12	+	3458	6	NNC	ENSG00000198040.11	novel	6811	5	NA	NA	-3	-9	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	79.3942063377423	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAGACATTTCTTAGTGG	133037179	True	NA	7	True	AATAAA	-16	NA	133037297	133059597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr12_+_133037546_133038874_133039013_133041277_133041483_133047954_133048082_133048752_133048849_133056953
transcript_52257.known	chr12	+	6811	5	FSM	ENSG00000198040.11	ENST00000539354.6	6811	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	41.2575750620416	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCTCAAGTTGTGTTTG	133036504	True	NA	16	True	AATAAA	-18	NA	133037508	133063299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_133037546_133041277_133041483_133047954_133048082_133048752_133048849_133056953
transcript_52258.nic	chr12	+	916	5	NIC	ENSG00000198040.11	novel	6811	5	NA	NA	-8	0	combination_of_known_junctions	TRUE	canonical	1	2	junction_4	76.9395054572097	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGTTGTGTTTGTTACA	NA	False	NA	21	True	AATAAA	-23	NA	133037283	133063304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_133037546_133041277_133041483_133047954_133048082_133048752_133048849_133063078
transcript_5226.known	chr1	+	986	7	FSM	ENSG00000186501.15	ENST00000478104.5	986	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	120.792866787185	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCTGTCAAGGTGGCCC	27319445	True	NA	NA	False	NA	NA	NA	27322284	27335824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27322392_27330719_27330805_27332069_27332102_27333957_27334055_27334150_27334282_27334666_27334755_27335378
transcript_52260.known	chr12	+	637	3	FSM	ENSG00000198040.11	ENST00000539686.5	637	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	89.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGCCACATCTTATACCA	133036520	True	NA	NA	False	NA	NA	NA	133037524	133048356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_133037555_133041277_133041483_133047954
transcript_52261.known	chr12	+	2328	6	FSM	ENSG00000196387.10	ENST00000536790.5	2328	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_4	31.5556651015313	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGCTTGCTGATTTTT	133079568	False	NA	63	True	AATAAA	-20	NA	133081010	133107428	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_133081073_133081272_133081330_133083102_133083230_133083465_133083562_133100986_133101054_133105509
transcript_52263.known	chr12	+	2349	5	FSM	ENSG00000196387.10	ENST00000355557.7	2349	5	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_4	30.6308667849932	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGCTTGCTGATTTTT	133079480	True	NA	63	True	AATAAA	-20	NA	133080922	133107428	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_133081073_133081272_133081330_133083102_133083230_133083465_133083562_133105509
transcript_52265.nic	chr12	+	2389	5	NIC	ENSG00000196387.10	novel	2328	6	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	38.9639256235816	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGCTTGCTGATTTTT	133079450	True	NA	63	True	AATAAA	-20	NA	133080892	133107428	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_133081073_133083102_133083230_133083465_133083562_133100986_133101054_133105509
transcript_52267.known	chr12	+	553	4	FSM	ENSG00000196387.10	ENST00000412146.6	553	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	44.3946943776944	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCAAGGATCATACTGAG	133079432	True	NA	NA	False	TTTAAA	-11	NA	133080874	133105641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_133081073_133083102_133083230_133083465_133083562_133105509
transcript_5227.nic	chr1	+	2778	6	ISM	ENSG00000186501.15	ENST00000464720.5	1665	7	-17	1	-17	0	intron_retention	FALSE	canonical	3	17	junction_3	126.990708321515	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGGTGCCCTGTCATTGT	27319390	True	NA	7	True	AATAAA	-14	NA	27322229	27336399	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_27322392_27330719_27330805_27330984_27331138_27332069_27332102_27333957_27334055_27334150
transcript_52270.known	chr12	-	17294	2	FSM	ENSG00000214029.6	ENST00000537226.3	17294	2	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTTTGACAAATATAAGC	-133129294	True	NA	-4	True	AATAAA	-17	NA	133130274	133104778	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_-_133122025_133130226
transcript_52273.known	chr12	+	3768	7	FSM	ENSG00000090612.22	ENST00000546126.7	3768	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	46.7240718354992	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTTAACCTCACCTTAGAA	133179215	True	NA	-2	True	AATAAA	-12	NA	133181494	133205114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_133181687_133181945_133182031_133184663_133184760_133187871_133188073_133191488_133191616_133191907_133192004_133202143
transcript_52274.known	chr12	+	3773	7	FSM	ENSG00000090612.22	ENST00000541009.6	3773	7	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	23.0753596336487	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACCTGTTATTATATCTT	133179279	True	NA	57	True	NA	NA	NA	133181558	133205173	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_133181687_133181945_133182031_133187871_133188073_133191488_133191616_133191907_133192004_133193427_133193534_133202143
transcript_52275.known	chr12	+	3773	7	FSM	ENSG00000090612.22	ENST00000542986.6	3773	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	35.4655544938403	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACCTGTTATTATATCTT	133179234	True	NA	57	True	NA	NA	NA	133181513	133205173	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_133181687_133181945_133182031_133187871_133188073_133191533_133191616_133191907_133192004_133193427_133193534_133202143
transcript_52277.nic	chr12	+	4451	6	NIC	ENSG00000256223.6	novel	4406	5	NA	NA	-4	-176	intron_retention	FALSE	canonical	3	22	junction_1	9.47839648885823	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATATTTGTGGCATATCCG	133129647	True	NA	3	True	AATAAA	-16	NA	133130583	133159289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr12_+_133130755_133130836_133131015_133144433_133144526_133151027_133151155_133151808_133151905_133155502
transcript_52278.known	chr12	+	717	6	FSM	ENSG00000090612.22	ENST00000500625.7	717	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	47.6008403287169	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAATGCACTACATTTG	133179223	True	NA	NA	False	AATAAA	-27	NA	133181502	133202219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_133181628_133181945_133182031_133187864_133188073_133191488_133191616_133191907_133192004_133202143
transcript_52280.known	chr12	+	13390	6	FSM	ENSG00000090612.22	ENST00000536435.7	13390	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	31.237157361066	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTCACCAGGGTCAGCC	133179215	True	NA	NA	False	AATAAA	-19	NA	133181494	133214832	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_133181687_133181945_133182031_133187871_133188073_133191488_133191616_133191907_133192004_133202143
transcript_52281.known	chr12	+	2169	5	FSM	ENSG00000256223.6	ENST00000426665.6	2169	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	6.17960354715414	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATATGGGAATTTTTCAC	133129690	True	NA	-16	True	NA	NA	NA	133130626	133156968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr12_+_133131015_133144433_133144526_133151027_133151155_133151808_133151905_133155502
transcript_52287.known	chr13	+	4239	14	FSM	ENSG00000196199.14	ENST00000361479.10	4239	14	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_4	15.0301472196312	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGTTTCCTTTTATATC	19628809	True	NA	7	True	AATAAA	-14	NA	19633658	19673441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_19633962_19642114_19642271_19646442_19647292_19648421_19648522_19650002_19650261_19658994_19659121_19659200_19659290_19661697_19661839_19663039_19663127_19666424_19666580_19668376_19668532_19670235_19670364_19671205_19671290_19671833
transcript_5229.known	chr1	+	1511	6	FSM	ENSG00000186501.15	ENST00000608611.5	1511	6	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_5	20.4195984289604	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTGCCCTGTCATTGTT	27319408	True	NA	8	True	AATAAA	-15	NA	27322247	27336400	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27322392_27330719_27330805_27332069_27332102_27333957_27334055_27334150_27334282_27335378
transcript_52295.known	chr13	-	2013	10	FSM	ENSG00000121390.19	ENST00000619300.4	2013	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_9	146.430449508324	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGTTATTAGTGGTAT	-19776195	True	NA	-9	True	AATAAA	-21	NA	19783019	19702870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_19703361_19705661_19705832_19709541_19709600_19730238_19730345_19741564_19741650_19751270_19751468_19759322_19759419_19772241_19772544_19782385_19782792_19782916
transcript_52299.known	chr13	-	2435	9	FSM	ENSG00000121390.19	ENST00000338910.9	2435	9	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_3	69.8720929627845	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTGAAGGCAAATCTCT	-19776121	True	NA	NA	False	AATAAA	-22	NA	19782945	19702499	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_19703361_19705661_19705832_19709541_19709600_19730238_19730345_19741564_19741650_19751270_19751468_19759322_19759419_19772241_19772544_19782385
transcript_52300.known	chr13	-	1647	8	FSM	ENSG00000121390.19	ENST00000471658.5	1647	8	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	163.644088665317	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGCCTTTGTCATTTTGT	-19776093	True	NA	-13	True	ATTAAA	-14	NA	19782917	19674755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_19674985_19677723_19677824_19730238_19730345_19741564_19741650_19751270_19751468_19759322_19759419_19772241_19772544_19782385
transcript_52301.known	chr13	-	1709	8	FSM	ENSG00000121390.19	ENST00000492741.5	1709	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	168.787150105736	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGGTGTGGTGGTCTTG	-19776118	True	NA	-3	True	ATTAAA	-17	NA	19782942	19675387	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_19675654_19677723_19677824_19730238_19730345_19741564_19741650_19751270_19751468_19759322_19759419_19772241_19772544_19782385
transcript_52305.nic	chr13	-	4408	7	NIC	ENSG00000121390.19	novel	1709	8	NA	NA	1	-2	intron_retention	FALSE	canonical	3	77	junction_1	133.554816045281	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTAGCCTTTGTCATTTT	-19776117	True	NA	-15	True	ATTAAA	-12	NA	19782941	19674757	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_19677824_19730238_19730345_19741564_19741650_19751270_19751468_19759322_19759419_19772241_19772544_19782385
transcript_52309.known	chr13	-	866	4	FSM	ENSG00000121390.19	ENST00000427943.1	866	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	175.516381001888	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAGAAAACTCAACAATATC	-19776178	True	NA	-25	True	NA	NA	NA	19783002	19759346	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_19759419_19772241_19772544_19782385_19782792_19782916
transcript_52310.nic	chr13	-	934	3	ISM	ENSG00000121390.19	ENST00000427943.1	866	4	57	0	0	0	intron_retention	FALSE	canonical	3	379	junction_2	9	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAGAAAACTCAACAATATC	-19776121	True	NA	-25	True	NA	NA	NA	19782945	19759346	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_19759419_19772241_19772544_19782385
transcript_52311.known	chr13	-	3283	8	FSM	ENSG00000132950.19	ENST00000337963.9	3283	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	25.7705733149185	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAAGTGTTATGGGCTT	-19862204	True	NA	NA	False	ATTAAA	-21	NA	19863649	19823481	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_19825236_19835476_19835690_19837655_19837822_19838699_19838986_19851354_19851449_19851688_19852191_19862398_19862467_19863449
transcript_52320.known	chr13	-	1382	6	FSM	ENSG00000132950.19	ENST00000382905.8	1382	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	22.5530485744167	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAAAGTACACATCTGTT	-19862079	True	NA	-13	True	AATAAA	-17	NA	19863524	19837464	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_19837822_19838699_19838986_19851354_19851449_19851688_19852191_19862398_19862467_19863449
transcript_52328.known	chr13	-	1622	5	FSM	ENSG00000132950.19	ENST00000467542.5	1622	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	23.2163735324878	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAAAGTACACATCTGTT	-19862079	True	NA	-13	True	AATAAA	-17	NA	19863524	19837464	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_19837822_19838699_19838986_19851354_19852191_19862398_19862467_19863449
transcript_52329.known	chr13	-	1092	5	FSM	ENSG00000132950.19	ENST00000382907.8	1092	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	30.6349473640808	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTTTCTATGGAATTG	-19862063	True	NA	-1	True	AATAAA	-29	NA	19863508	19837452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_19837822_19851354_19851449_19851688_19852191_19862398_19862467_19863449
transcript_5233.known	chr1	+	1071	5	FSM	ENSG00000186501.15	ENST00000464813.5	1071	5	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_2	18.389874931603	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGAACCCAGACCCCTGG	27319441	True	NA	NA	False	NA	NA	NA	27322280	27334896	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27322392_27330719_27330805_27332069_27332102_27333957_27334055_27334150
transcript_52336.known	chr13	+	1191	1	FSM	ENSG00000275964.1	ENST00000620617.1	1191	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATTGAGCCCCGTTTTAC	19863371	True	NA	17	True	AATACA	-22	NA	19863857	19865048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_19863900_19865000
transcript_52337.nic	chr13	+	4637	27	NIC	ENSG00000121741.17	novel	5051	26	NA	NA	-4	-208	combination_of_known_junctions	FALSE	canonical	2	91	junction_3	110.156296975314	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGCTGGGGTTTTTGTTTT	19950986	True	NA	12	True	AATAAA	-12	NA	19958672	20086483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_19958842_19959957_19960027_19970024_19970072_19993062_19993565_19993825_19993920_20002849_20003136_20005073_20005240_20006373_20006587_20019546_20019619_20026611_20026763_20027202_20027319_20031318_20031436_20034253_20034405_20036736_20036910_20051432_20051599_20052276_20052312_20058574_20058705_20059446_20059563_20061052_20061225_20062845_20062972_20064450_20064546_20066850_20067020_20067238_20067391_20082015_20082131_20082780_20083033_20083655_20083777_20085821
transcript_52338.nic	chr13	+	4845	27	NIC	ENSG00000121741.17	novel	5051	26	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	91	junction_3	110.156296975314	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCATTTGTGGCTTTCTGC	19950986	True	NA	23	True	ATTAAA	-16	NA	19958672	20086691	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_19958842_19959957_19960027_19970024_19970072_19993062_19993565_19993825_19993920_20002849_20003136_20005073_20005240_20006373_20006587_20019546_20019619_20026611_20026763_20027202_20027319_20031318_20031436_20034253_20034405_20036736_20036910_20051432_20051599_20052276_20052312_20058574_20058705_20059446_20059563_20061052_20061225_20062845_20062972_20064450_20064546_20066850_20067020_20067238_20067391_20082015_20082131_20082780_20083033_20083655_20083777_20085821
transcript_52342.known	chr13	+	5051	26	FSM	ENSG00000121741.17	ENST00000382871.3	5051	26	0	0	0	0	multi-exon	FALSE	canonical	2	91	junction_3	108.040333209408	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATATGTATGTATGTGT	19951096	True	NA	12	True	AATAAA	-19	NA	19958782	20086746	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_19958842_19959957_19960027_19970024_19970072_19993062_19993920_20002849_20003136_20005073_20005240_20006373_20006587_20019546_20019619_20026611_20026763_20027202_20027319_20031318_20031436_20034253_20034405_20036736_20036910_20051432_20051599_20052276_20052312_20058574_20058705_20059446_20059563_20061052_20061225_20062845_20062972_20064450_20064546_20066850_20067020_20067238_20067391_20082015_20082131_20082780_20083033_20083655_20083777_20085821
transcript_52343.nic	chr13	+	4590	26	NIC	ENSG00000121741.17	novel	5051	26	NA	NA	-4	-208	combination_of_known_junctions	FALSE	canonical	2	200	junction_3	84.4612668623908	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGCTGGGGTTTTTGTTTT	19950986	True	NA	12	True	AATAAA	-12	NA	19958672	20086483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_19958842_19959957_19960027_19993062_19993565_19993825_19993920_20002849_20003136_20005073_20005240_20006373_20006587_20019546_20019619_20026611_20026763_20027202_20027319_20031318_20031436_20034253_20034405_20036736_20036910_20051432_20051599_20052276_20052312_20058574_20058705_20059446_20059563_20061052_20061225_20062845_20062972_20064450_20064546_20066850_20067020_20067238_20067391_20082015_20082131_20082780_20083033_20083655_20083777_20085821
transcript_52344.nic	chr13	+	4744	26	NIC	ENSG00000121741.17	novel	7429	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	200	junction_3	84.4612668623908	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCATTTGTGGCTTTCTGC	19951040	True	NA	23	True	ATTAAA	-16	NA	19958726	20086691	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_19958842_19959957_19960027_19993062_19993565_19993825_19993920_20002849_20003136_20005073_20005240_20006373_20006587_20019546_20019619_20026611_20026763_20027202_20027319_20031318_20031436_20034253_20034405_20036736_20036910_20051432_20051599_20052276_20052312_20058574_20058705_20059446_20059563_20061052_20061225_20062845_20062972_20064450_20064546_20066850_20067020_20067238_20067391_20082015_20082131_20082780_20083033_20083655_20083777_20085821
transcript_5235.nic	chr1	+	3352	5	NIC	ENSG00000186501.15	novel	1596	6	NA	NA	9	0	intron_retention	FALSE	canonical	3	239	junction_4	22.796655456448	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTGCCCTGTCATTGTT	27319423	True	NA	8	True	AATAAA	-15	NA	27322262	27336400	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_27322392_27330719_27330805_27332069_27334055_27334150_27334282_27335378
transcript_52352.known	chr13	+	7429	25	FSM	ENSG00000121741.17	ENST00000610343.5	7429	25	0	0	0	0	multi-exon	FALSE	canonical	2	241	junction_12	78.6961014846917	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTGGATTTCCCCCTT	19951040	True	NA	NA	False	AATAAA	-16	NA	19958726	20089115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_19958842_19959957_19960027_19993062_19993920_20002849_20003136_20005073_20005240_20006373_20006587_20019546_20019619_20026611_20026763_20027202_20027319_20031318_20031436_20034253_20034405_20036736_20036910_20051432_20051599_20052276_20052312_20058574_20058705_20059446_20059563_20061052_20061225_20062845_20062972_20064450_20064546_20066850_20067020_20067238_20067391_20082015_20082131_20082780_20083033_20083655_20083777_20085821
transcript_5236.known	chr1	+	1936	15	FSM	ENSG00000142765.18	ENST00000616558.5	1936	15	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_9	18.2561144355998	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAAGGCTGGTGTCTGCTG	27341334	True	NA	NA	False	AATAAA	-18	NA	27342021	27353932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27342151_27345296_27345526_27347420_27347570_27347807_27347881_27347966_27348013_27349079_27349153_27349397_27349499_27349651_27349766_27349971_27350133_27350388_27350486_27350793_27350953_27351257_27351337_27351455_27351556_27353282_27353489_27353712
transcript_5237.known	chr1	+	1900	15	FSM	ENSG00000142765.18	ENST00000318074.9	1900	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	19.6375317456452	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAAGGCTGGTGTCTGCTG	27341334	True	NA	NA	False	AATAAA	-18	NA	27342021	27353932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27342151_27345296_27345526_27347420_27347570_27347807_27347881_27347966_27348013_27349115_27349153_27349397_27349499_27349651_27349766_27349971_27350133_27350388_27350486_27350793_27350953_27351257_27351337_27351455_27351556_27353282_27353489_27353712
transcript_52386.known	chr13	+	1912	8	FSM	ENSG00000121741.17	ENST00000382881.7	1912	8	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_3	41.9299707724629	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTTTCTTTCAAAAAAATT	19950990	True	NA	NA	False	TATAAA	-42	NA	19958676	20019963	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_19958842_19959957_19960027_19993062_19993565_19993825_19993920_20002849_20003136_20005073_20005240_20006373_20006587_20019546
transcript_52390.nic	chr13	+	2177	7	ISM	ENSG00000121741.17	ENST00000610343.5	7429	25	-54	69152	-4	0	5prime_fragment	FALSE	canonical	3	265	junction_1	24.8556946303167	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTTTCTTTCAAAAAAATT	19950986	True	NA	NA	False	TATAAA	-42	NA	19958672	20019963	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_19958842_19959957_19960027_19993062_19993920_20002849_20003136_20005073_20005240_20006373_20006587_20019546
transcript_52394.known	chr13	-	5214	2	FSM	ENSG00000121743.4	ENST00000241125.4	5214	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTAGTTCTGCAGTTGGT	-20160984	True	NA	NA	False	AATAAA	-19	NA	20161052	20138254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_20143306_20160889
transcript_52395.known	chr13	-	1483	8	FSM	ENSG00000165475.15	ENST00000298248.12	1483	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	5.69281681290608	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTTTCTCTTTTGGTTT	-20525728	True	NA	-1	True	AATAAA	-21	NA	20525857	20403668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_20404243_20404634_20404742_20413281_20413388_20432101_20432297_20439592_20439755_20489369_20489497_20512442_20512551_20525753
transcript_52396.known	chr13	-	1331	7	FSM	ENSG00000165475.15	ENST00000644593.1	1331	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	9.1469484893415	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTCTCTTTTGGTTTTT	-20525736	True	NA	1	True	AATAAA	-23	NA	20525865	20403666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_20404243_20404634_20404742_20413281_20413388_20432101_20432297_20489369_20489497_20512442_20512551_20525753
transcript_52398.known	chr13	+	2850	26	FSM	ENSG00000032742.18	ENST00000351808.10	2850	26	0	0	0	0	multi-exon	TRUE	canonical	1	12	junction_25	12.3783035994437	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATATGTGTATGTAGTCA	20566336	True	NA	94	True	AATAAA	-21	NA	20567156	20691444	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_20567257_20574379_20574476_20582956_20583020_20589810_20589868_20590966_20591021_20591617_20591682_20592334_20592405_20596149_20596241_20597014_20597120_20598650_20598754_20599450_20599566_20601704_20601934_20605034_20605106_20615792_20615880_20625749_20625850_20631015_20631103_20638331_20638519_20641289_20641399_20643454_20643606_20644842_20644959_20653875_20653929_20656364_20656431_20663497_20663605_20670972_20671040_20690704_20690816_20691053
transcript_5240.nic	chr1	+	2229	14	NIC	ENSG00000142765.18	novel	1936	15	NA	NA	-30	0	intron_retention	FALSE	canonical	2	20	junction_6	18.3770502619806	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGTGTCTGCTGGGGCA	27341977	False	NA	NA	False	AATAAA	-23	NA	27341989	27353937	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_27342151_27345296_27345526_27347420_27347570_27347807_27347881_27347966_27348013_27349079_27349153_27349397_27349499_27349651_27349766_27349971_27350486_27350793_27350953_27351257_27351337_27351455_27351556_27353282_27353489_27353712
transcript_52406.known	chr13	-	1054	5	FSM	ENSG00000150456.11	ENST00000382758.6	1054	5	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	11.6833214455479	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTGGTAGCATCCTAGG	-20773446	True	NA	NA	False	NA	NA	NA	20773961	20728730	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_20729217_20731840_20732122_20737722_20737806_20757454_20757618_20773920
transcript_52412.known	chr13	-	9921	23	FSM	ENSG00000132953.18	ENST00000255305.11	9857	23	-64	0	-63	0	multi-exon	TRUE	non_canonical	0	0	junction_3	35.1825522591962	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTGAAAACAGATTTCAT	-20902033	False	NA	0	True	AATAAA	-22	NA	20902810	20777328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_20783920_20786964_20787058_20787480_20787599_20788485_20788617_20790461_20790581_20796075_20796257_20796763_20797058_20799164_20799340_20800155_20800326_20800830_20800991_20807456_20807635_20808435_20808582_20809082_20809226_20809790_20809968_20821703_20821879_20822131_20822290_20827066_20827180_20842894_20843049_20843769_20843887_20855626_20855766_20862716_20862859_20868595_20868702_20902669
transcript_52428.nic	chr13	-	924	4	ISM	ENSG00000132953.18	ENST00000490513.1	914	5	89	6852	89	5927	5prime_fragment	FALSE	canonical	3	22	junction_2	60.4777277644883	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAGCTCTAGATGTT	-20902182	False	NA	NA	False	AAAAAG	-9	NA	20902959	20862485	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_20862859_20862968_20863124_20868595_20868702_20902669
transcript_52430.nic	chr13	-	556	3	ISM	ENSG00000132953.18	ENST00000255305.11	9857	23	0	85157	0	5927	5prime_fragment	FALSE	canonical	3	126	junction_1	14.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAGCTCTAGATGTT	-20899607	True	NA	NA	False	AAAAAG	-9	NA	20902746	20862485	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_20862859_20868595_20868702_20902669
transcript_52431.known	chr13	-	5546	8	FSM	ENSG00000150457.9	ENST00000382592.5	5546	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	5.30306034093445	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTAGTTGGTGTCATGT	-21057897	True	NA	-6	True	ATTAAA	-15	NA	21061586	20973035	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_20975365_20979690_20979798_20981465_20981649_20983223_20983807_20987880_20989305_20991271_20991405_21045684_21046231_21061345
transcript_52440.known	chr13	+	2234	4	FSM	ENSG00000150459.12	ENST00000607003.5	2234	4	0	0	0	0	multi-exon	FALSE	canonical	3	3072	junction_1	119.349160961534	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTTGCTCAGTGCTTTA	21123018	True	NA	8	True	AATAAA	-19	NA	21140577	21149082	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_21140682_21140885_21140996_21146804_21146928_21147185
transcript_52444.known	chr13	+	670	3	FSM	ENSG00000150459.12	ENST00000467636.1	670	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1575	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAGTGTGAAAGTTAATG	21140868	False	NA	18	True	AATATA	-14	NA	21140885	21147603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_21140996_21146804_21146928_21147166
transcript_52446.known	chr13	-	2869	9	FSM	ENSG00000165480.16	ENST00000314759.6	2869	9	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_5	81.0169735302424	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGGTTTGGCAAAGTC	-21165577	True	NA	-2	True	AATAAA	-19	NA	21176552	21153594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_21155151_21155692_21155812_21157921_21158126_21159901_21159988_21161789_21161876_21167987_21168400_21172338_21172505_21172619_21172682_21176374
transcript_52455.known	chr13	-	2803	8	FSM	ENSG00000165480.16	ENST00000298260.8	2803	8	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_7	158.035903954688	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGGTTTGGCAAAGTC	-21165573	True	NA	-2	True	AATAAA	-19	NA	21176548	21153594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_21155151_21155692_21155812_21157921_21158126_21159901_21159988_21161789_21161876_21167987_21168400_21172338_21172505_21176374
transcript_52456.known	chr13	-	2745	8	FSM	ENSG00000165480.16	ENST00000400018.7	2745	8	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	187.57996934097	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGGTTTGGCAAAGTC	-21165572	True	NA	-2	True	AATAAA	-19	NA	21176547	21153594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_21155151_21157921_21158126_21159901_21159988_21161789_21161876_21167987_21168400_21172338_21172505_21172619_21172682_21176374
transcript_52468.nic	chr13	-	963	4	ISM	ENSG00000165480.16	ENST00000314759.6	2869	9	-35	14283	-35	344	5prime_fragment	FALSE	canonical	3	552	junction_3	39.3022476032436	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCAGATATTTATTTAT	-21165612	True	NA	1	True	AATAAA	-28	NA	21176587	21167877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_21168400_21172338_21172505_21172619_21172682_21176374
transcript_52470.nic	chr13	-	723	4	ISM	ENSG00000165480.16	ENST00000314759.6	2869	9	-33	14521	-33	106	5prime_fragment	FALSE	canonical	3	552	junction_3	39.3022476032436	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGCACTAAAAATGGATGA	-21165610	True	NA	-13	True	AGTAAA	-20	NA	21176585	21168115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_21168400_21172338_21172505_21172619_21172682_21176374
transcript_52471.known	chr13	-	750	3	FSM	ENSG00000165480.16	ENST00000462482.1	750	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	209.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTTGCTGTTTGCAAAC	-21165576	True	NA	NA	False	NA	NA	NA	21176551	21154696	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_21155151_21155692_21155812_21176374
transcript_52474.known	chr13	-	397	3	FSM	ENSG00000165480.16	ENST00000475251.1	397	3	0	0	0	0	multi-exon	FALSE	canonical	3	552	junction_2	47	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCCTTGGCTATGGTTTT	-21165498	True	NA	NA	False	AAGAAA	-25	NA	21176473	21172268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_21172505_21172619_21172682_21176374
transcript_52475.known	chr13	+	2233	2	FSM	ENSG00000173141.5	ENST00000309594.5	2233	2	0	0	0	0	multi-exon	FALSE	canonical	3	1757	junction_1	0	474	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTGTTTCTAAATACAT	21154216	True	NA	6	True	AATAAA	-13	NA	21176657	21179084	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_21176718_21176911
transcript_52479.nnic	chr13	-	4682	14	NNC	ENSG00000180776.16	novel	1351	13	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_1	66.9863538165284	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTTCTTTGTTATAAAG	-21451386	True	NA	-5	True	AATAAA	-19	NA	21459385	21372570	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr13_-_21374335_21375056_21376656_21381433_21381550_21381900_21381946_21382919_21383010_21387507_21387635_21391721_21391855_21400372_21400494_21401652_21401686_21402796_21402867_21413651_21413773_21421060_21421165_21425651_21425679_21459053
transcript_52483.nnic	chr13	-	4637	13	NNC	ENSG00000180776.16	novel	5355	13	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	47.9826357480843	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTTCTTTGTTATAAAG	-21451386	True	NA	-5	True	AATAAA	-19	NA	21459385	21372570	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr13_-_21374335_21375056_21376656_21381433_21381550_21382919_21383010_21387507_21387635_21391721_21391855_21400372_21400494_21401652_21401686_21402796_21402867_21413651_21413773_21421060_21421165_21425651_21425679_21459053
transcript_52488.known	chr13	-	5338	12	FSM	ENSG00000180776.16	ENST00000382466.7	5338	12	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	38.167746324667	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTTTTCTTTGTTATAA	-21451370	True	NA	-7	True	AATAAA	-17	NA	21459369	21372572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_21376656_21381433_21381547_21382919_21383010_21387507_21387635_21391721_21391855_21400372_21400494_21401652_21401686_21402796_21402867_21413651_21413773_21421060_21421165_21425651_21425679_21459053
transcript_52497.known	chr13	-	1885	12	FSM	ENSG00000165487.14	ENST00000382374.9	1885	12	0	0	0	0	multi-exon	TRUE	canonical	3	304	junction_5	22.3092464986795	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGAGGTGCTTTTTATTT	-21596643	True	NA	NA	False	AATAAA	-23	NA	21604170	21492690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_21493354_21495160_21495319_21496051_21496161_21502925_21503098_21510003_21510102_21514352_21514419_21521244_21521328_21522602_21522651_21539301_21539378_21539656_21539689_21566796_21566945_21603938
transcript_52500.nic	chr13	-	1782	9	ISM	ENSG00000165487.14	ENST00000382374.9	1885	12	-44	9452	-33	684	5prime_fragment	FALSE	canonical	3	304	junction_2	13.7545447034789	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGATAGCCTTGATGGATA	-21596687	True	NA	NA	False	AATAAA	-24	NA	21604214	21502142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_21503098_21510003_21510102_21514352_21514419_21521244_21521328_21522602_21522651_21539301_21539378_21539656_21539689_21566796_21566945_21603938
transcript_52503.known	chr13	-	742	9	FSM	ENSG00000165487.14	ENST00000468222.2	742	9	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	145.70839886568	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAATTAACACAACTCTT	-21596654	True	NA	NA	False	TTTAAA	-41	NA	21604181	21510082	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_21510102_21514352_21514419_21515533_21515561_21521244_21521328_21522602_21522651_21539301_21539378_21539656_21539689_21566796_21566945_21603938
transcript_52506.known	chr13	-	2012	6	FSM	ENSG00000262619.3	ENST00000668623.1	2012	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.03960780543711	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTGGGGGTCAGCCCCCG	-22915723	False	NA	NA	False	NA	NA	NA	22915775	22859049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_22859912_22872934_22873275_22876297_22876475_22894605_22895039_22896360_22896503_22915717
transcript_52508.known	chr13	-	3464	10	FSM	ENSG00000151835.17	ENST00000423156.2	3464	10	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	16.3707055437449	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCATCGTAATGGGTGTT	-23432036	True	NA	-10	True	AATAAA	-17	NA	23433740	23328832	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_23329485_23353784_23353877_23354518_23356008_23358334_23358482_23365165_23365278_23368401_23368488_23371077_23371166_23375118_23375270_23411219_23411741_23433614
transcript_52509.known	chr13	-	15635	10	FSM	ENSG00000151835.17	ENST00000382292.9	15635	10	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_8	15.0775771705315	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCGTAATGGGTGTTTCC	-23431998	True	NA	-7	True	AATAAA	-20	NA	23433702	23328829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_23341691_23353784_23353877_23354518_23356008_23358334_23358482_23365165_23365278_23368401_23368488_23371077_23371166_23375118_23375270_23411219_23411741_23433614
transcript_52513.known	chr13	-	3037	9	FSM	ENSG00000151835.17	ENST00000683367.1	3037	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	12.5099960031968	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACTTTTAATAAAGGAAAAT	-23375579	False	NA	-39	True	TATAAA	-7	NA	23375600	23328861	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_23329485_23353784_23353877_23354518_23356008_23358334_23358482_23365165_23365278_23368401_23368488_23371077_23371166_23375118_23375270_23375351
transcript_52518.nic	chr13	-	2935	9	ISM	ENSG00000151835.17	ENST00000683270.1	7009	10	-60	12071	-8	-11871	5prime_fragment	FALSE	canonical	2	18	junction_1	9.89238975172329	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTATTCAAGAATTGGCA	-23371796	True	NA	NA	False	NA	NA	NA	23375551	23341120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_23341691_23353784_23353877_23354518_23356008_23358334_23358482_23365165_23365278_23368401_23368488_23371077_23371166_23375118_23375270_23375351
transcript_52524.known	chr13	-	15134	8	FSM	ENSG00000151835.17	ENST00000402364.1	15134	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	17.4554827361211	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAATGGGTGTTTCCTGAG	-23371788	True	NA	-3	True	AATAAA	-24	NA	23375543	23328825	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_23341691_23353784_23353877_23354518_23356008_23358334_23358482_23365165_23365278_23368401_23368488_23375118_23375270_23375351
transcript_52525.nic	chr13	-	2467	8	ISM	ENSG00000151835.17	ENST00000683270.1	7009	10	-113	24686	-4	0	5prime_fragment	FALSE	canonical	3	36	junction_7	5.64963426665291	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTTAAAAGTTTTCTGT	NA	False	NA	NA	False	AATAAA	-20	NA	23375604	23353735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_23353877_23354518_23356008_23358334_23358482_23365165_23365278_23368401_23368488_23371077_23371166_23375118_23375270_23375351
transcript_52527.known	chr13	-	2782	7	FSM	ENSG00000151835.17	ENST00000683154.1	2782	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_6	5.92780641459291	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTTAACTGACTTGAAAAT	-23371754	True	NA	NA	False	AATAAA	-7	NA	23375509	23353967	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_23356008_23358334_23358482_23365165_23365278_23368401_23368488_23371077_23371166_23375118_23375270_23375351
transcript_52531.known	chr13	-	2500	2	FSM	ENSG00000151835.17	ENST00000683638.1	2500	2	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAACACCATGTTTAAAAA	-23432059	True	NA	NA	False	NA	NA	NA	23433763	23409389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_23411741_23433614
transcript_52534.known	chr13	-	2381	19	FSM	ENSG00000027001.10	ENST00000382172.4	2381	19	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_12	34.9320769494171	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGCTTTTCACCTGTTT	-23886150	True	NA	-12	True	AATAAA	-17	NA	23889400	23730188	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_23730446_23756544_23756619_23760095_23760218_23805949_23806070_23809849_23809925_23836239_23836350_23837551_23837757_23839648_23839727_23841334_23841489_23858859_23858913_23862301_23862363_23864140_23864190_23869291_23869449_23870012_23870196_23874845_23874910_23879267_23879355_23881698_23881788_23886332_23886507_23889131
transcript_52542.known	chr13	+	852	4	FSM	ENSG00000205861.13	ENST00000382133.9	852	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	1.69967317119759	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTGTGAACAACTTTGG	23888697	True	NA	8	True	AATAAA	-20	NA	23888841	23892104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_23889012_23889999_23890043_23891384_23891532_23891612
transcript_52545.known	chr13	+	8454	13	FSM	ENSG00000182957.16	ENST00000382108.8	8454	13	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	8.40469445541531	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTTCTGATGATGCATTT	24156896	True	NA	4	True	ATTAAA	-15	NA	24160719	24307069	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_24160933_24222818_24224583_24249476_24249843_24251717_24251863_24284134_24284272_24286213_24286394_24286764_24286951_24288998_24289179_24290651_24290885_24294738_24294869_24297362_24297736_24300400_24300476_24302597
transcript_52546.known	chr13	+	6665	12	FSM	ENSG00000182957.16	ENST00000382095.8	6665	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	14.2144147532306	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGATGATGCATTTGAG	24156924	True	NA	7	True	ATTAAA	-18	NA	24160747	24307072	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_24160933_24249476_24249843_24251717_24251863_24284134_24284272_24286213_24286394_24286764_24286951_24288998_24289179_24290651_24290885_24294738_24294869_24297362_24297736_24300400_24300476_24302597
transcript_52550.nic	chr13	+	2687	5	NIC	ENSG00000182957.16	novel	8454	13	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	16.4696690920006	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAATATAGAAA	24156853	True	NA	NA	False	AAGAAA	-26	NA	24160676	24278769	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_24160933_24222818_24224583_24249476_24249843_24251717_24251863_24278613
transcript_52553.known	chr13	+	2191	2	FSM	ENSG00000182957.16	ENST00000466831.2	2191	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCATTGAGATGACATTTG	24156898	True	NA	NA	False	AATAAA	-16	NA	24160721	24224798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_24160933_24222818
transcript_52558.known	chr13	-	5437	34	FSM	ENSG00000102699.6	ENST00000381989.4	5437	34	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_29	24.782061998104	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTTTTCTGTGTCTCA	-24507366	True	NA	-4	True	AATAAA	-16	NA	24512778	24420930	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_24421315_24426465_24426599_24431376_24431477_24434394_24435475_24441845_24441969_24442589_24442686_24443649_24443731_24446680_24446762_24447015_24447187_24449717_24449818_24452405_24452594_24453586_24453655_24455016_24455213_24456340_24456479_24459043_24459123_24459263_24459311_24459971_24460137_24469023_24469111_24469893_24470026_24475471_24475597_24477700_24477858_24478092_24478277_24484652_24484749_24486167_24486306_24490667_24490829_24492420_24492595_24493595_24493734_24494572_24494723_24498115_24498230_24499300_24499377_24500315_24500383_24501632_24501835_24503644_24503778_24512705
transcript_52567.nic	chr13	-	2129	16	ISM	ENSG00000102699.6	ENST00000381989.4	5437	34	-20	48974	-20	-13508	5prime_fragment	FALSE	canonical	3	161	junction_11	26.9801573177194	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTTGGAGAGGTAAGGCAA	-24507386	True	NA	NA	False	NA	NA	NA	24512798	24469904	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_24470026_24475471_24475597_24477700_24477858_24478092_24478277_24484652_24484749_24486167_24486306_24490667_24490829_24492420_24492595_24493595_24493734_24494572_24494723_24498115_24498230_24499300_24499377_24500315_24500383_24501632_24501835_24503644_24503778_24512705
transcript_52569.nic	chr13	-	2125	16	ISM	ENSG00000102699.6	ENST00000381989.4	5437	34	-106	49064	-106	-13598	5prime_fragment	FALSE	canonical	3	161	junction_11	26.9801573177194	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACGTGCCCATTGAGGCA	-24507472	False	NA	NA	False	AATAAA	-2	NA	24512884	24469994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_24470026_24475471_24475597_24477700_24477858_24478092_24478277_24484652_24484749_24486167_24486306_24490667_24490829_24492420_24492595_24493595_24493734_24494572_24494723_24498115_24498230_24499300_24499377_24500315_24500383_24501632_24501835_24503644_24503778_24512705
transcript_52571.nic	chr13	-	562	4	ISM	ENSG00000102699.6	ENST00000381989.4	5437	34	0	79298	0	-43832	5prime_fragment	FALSE	canonical	3	231	junction_1	11.7284080571728	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACTTTTTCTTATTTTAA	-24507366	True	NA	NA	False	ATTAAA	-11	NA	24512778	24500228	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_24500383_24501632_24501835_24503644_24503778_24512705
transcript_52575.known	chr13	-	5082	17	FSM	ENSG00000151849.16	ENST00000381884.9	5082	17	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_9	27.9617484253042	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGTACAGATGTATCTA	-24917537	True	NA	NA	False	AATAAA	-14	NA	24922861	24882278	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_24883370_24883962_24884084_24884160_24884246_24884322_24884464_24885275_24885387_24885605_24885671_24889315_24889401_24892642_24892868_24899418_24899585_24903925_24904059_24905345_24906961_24907090_24907194_24908017_24908127_24909789_24910087_24911945_24912070_24912581_24913092_24922760
transcript_52578.known	chr13	-	5020	16	FSM	ENSG00000151849.16	ENST00000616936.4	5020	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	51.4932573795401	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAATATAAGTACAGATGT	-24917565	True	NA	NA	False	AATAAA	-9	NA	24922889	24882283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_24883370_24883962_24884084_24884160_24884246_24884322_24884464_24885275_24885387_24885605_24885671_24892642_24892868_24899418_24899585_24903925_24904059_24905345_24906961_24907090_24907194_24908017_24908127_24909789_24910087_24911945_24912070_24912581_24913092_24922760
transcript_52586.known	chr13	-	10055	3	FSM	ENSG00000165566.13	ENST00000357816.2	10055	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAATTCTGTTGGTTGTTA	NA	False	NA	NA	False	AATAAA	-25	NA	25172288	25161683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_25170482_25170838_25171720_25171912
transcript_52590.known	chr13	-	5117	14	FSM	ENSG00000139505.12	ENST00000381801.6	5117	14	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_7	10.9997310349043	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATTTCTAGGAAAGTAAA	-25285554	True	NA	1	True	AATAAA	-20	NA	25287488	25246221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_25249493_25251648_25251776_25251852_25251985_25253763_25253965_25254384_25254435_25257195_25257322_25257735_25257846_25258559_25258693_25261667_25261803_25265818_25265948_25266128_25266287_25267778_25267942_25274070_25274188_25287223
transcript_52599.known	chr13	+	4236	16	FSM	ENSG00000139496.16	ENST00000381736.8	4236	16	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_2	24.8080632053371	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGGTGTCAGTAGCTGTT	25296302	True	NA	14	True	AATAAA	-29	NA	25301624	25342421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_25301881_25307805_25307949_25309246_25309283_25312882_25313033_25313613_25313752_25315356_25315468_25319325_25319351_25320529_25320596_25320918_25321094_25324988_25325069_25326915_25327035_25327429_25327513_25331356_25331559_25336935_25337035_25338635_25338732_25339964
transcript_52603.nnic	chr13	+	4255	15	NIC	ENSG00000139496.16	novel	4236	16	NA	NA	-49	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_13	49.5116972367673	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGGTGTCAGTAGCTGTT	25301475	True	NA	14	True	AATAAA	-29	NA	25301506	25342421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_25301881_25307805_25307949_25309246_25309283_25312882_25313033_25313613_25313752_25315356_25315468_25319325_25319351_25320529_25320596_25320918_25321094_25324988_25325069_25326915_25327035_25327429_25327513_25331356_25331559_25338635_25338732_25339964
transcript_52604.known	chr13	+	2489	15	FSM	ENSG00000139496.16	ENST00000381718.7	2489	15	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	49.0915429767362	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACCAGCCTGACATGGT	25296310	True	NA	NA	False	NA	NA	NA	25301632	25340718	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_25301881_25307805_25307949_25312882_25313033_25313613_25313752_25315356_25315468_25319325_25319351_25320529_25320596_25320918_25321094_25324988_25325069_25326915_25327035_25327429_25327513_25331356_25331559_25336935_25337035_25338635_25338732_25339964
transcript_5261.nnic	chr1	+	505	2	NIC	ENSG00000142765.18	novel	793	4	NA	NA	-196	0	intron_retention	FALSE	canonical	3	59	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGTGTCTGCTGGGGCA	27351232	False	NA	NA	False	AATAAA	-23	NA	27351275	27353937	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_27351556_27353712
transcript_52612.known	chr13	-	3845	2	FSM	ENSG00000180730.5	ENST00000319420.4	3845	2	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTAGCGGAGTTGGGTTT	-26049638	True	NA	-17	True	AATAAA	-17	NA	26052016	26044596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_26047067_26050641
transcript_52615.known	chr13	-	3398	5	FSM	ENSG00000127870.17	ENST00000381570.7	3398	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	43.6692111217961	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTATGTGAACTATGTT	-26220061	False	NA	-21	True	AATAAA	-13	NA	26221703	26212774	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_26215593_26218510_26218607_26219456_26219668_26221247_26221331_26221513
transcript_52616.known	chr13	-	3282	5	FSM	ENSG00000127870.17	ENST00000346166.7	3282	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	27.4362898366379	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGTTTTTCTGTTGTTCC	-26220200	False	NA	-8	True	AATAAA	-26	NA	26221842	26212761	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_26215593_26218510_26218607_26219456_26219668_26221247_26221331_26221781
transcript_52617.known	chr13	-	3520	5	FSM	ENSG00000127870.17	ENST00000381588.9	3520	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_4	23.636571240347	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTATGTGAACTATGTT	-26220672	True	NA	-21	True	AATAAA	-13	NA	26222314	26212774	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_26215593_26218510_26218607_26219456_26219668_26221247_26221331_26222002
transcript_52618.known	chr13	+	3065	13	FSM	ENSG00000132964.12	ENST00000381527.8	3065	13	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_11	14.8237328482254	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGAGTCAGCTGTCTTTT	26250926	True	NA	6	True	AATAAA	-22	NA	26254128	26405238	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_26254770_26337566_26337643_26349071_26349183_26353739_26353881_26382813_26382872_26385210_26385343_26393366_26393511_26396284_26396355_26397152_26397226_26400452_26400551_26401268_26401348_26401465_26401625_26403955
transcript_52626.known	chr13	+	4857	10	FSM	ENSG00000132970.14	ENST00000335327.6	4857	10	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_6	22.3098273203028	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTTGTATGTTTGGCTT	26554115	True	NA	29	True	AATAAA	-40	NA	26557682	26688948	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_26557820_26612960_26613059_26642260_26642404_26665027_26665163_26667516_26667671_26671871_26671990_26676548_26676725_26681053_26681321_26682606_26682975_26685687
transcript_52637.known	chr13	-	4412	9	FSM	ENSG00000152484.14	ENST00000282344.11	4412	9	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_6	29.9643016771624	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGGTTTCAAGTGTGT	-27167486	True	NA	-12	True	ATTAAA	-16	NA	27171811	27066155	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_27069385_27071070_27071150_27075190_27075389_27089882_27089967_27090081_27090159_27095600_27095831_27105730_27105945_27116515_27116597_27171591
transcript_5264.known	chr1	-	4438	29	FSM	ENSG00000142733.17	ENST00000357582.3	4438	29	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_16	13.364350614487	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTCCTGGCAATTTTG	-27366837	True	NA	-7	True	ATTAAA	-16	NA	27366961	27355183	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_27355470_27355668_27355746_27356025_27356100_27356387_27356501_27356589_27356750_27357008_27357115_27357399_27357577_27357710_27357877_27358180_27358320_27358418_27358612_27358708_27358867_27359416_27359523_27359857_27359995_27360240_27360369_27360704_27360839_27360920_27361009_27361156_27361253_27361345_27361396_27361519_27361628_27361704_27361868_27362090_27362251_27362640_27362754_27362850_27363022_27363441_27363549_27363916_27364086_27364203_27364395_27364660_27364685_27364772_27364913_27366257
transcript_52641.nic	chr13	-	637	4	ISM	ENSG00000152484.14	ENST00000282344.11	4412	9	-42	29595	-42	-6313	5prime_fragment	FALSE	canonical	3	181	junction_1	16.0485374896143	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGAGAAAGCAGGAAAA	-27167528	True	NA	-8	True	AATACA	-19	NA	27171853	27095750	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_27095831_27105730_27105945_27116515_27116597_27171591
transcript_52642.known	chr13	-	349	2	FSM	ENSG00000152484.14	ENST00000620323.1	349	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGGGCTAATTATTTT	-27171689	False	NA	-3	True	ATTAAA	-29	NA	27171701	27170090	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_27170330_27171591
transcript_52644.known	chr13	+	566	6	FSM	ENSG00000122026.11	ENST00000311549.11	566	6	0	0	0	0	multi-exon	FALSE	canonical	3	12896	junction_1	3006.75260039798	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTCTTCATTGAGTAG	27251339	False	NA	0	True	AATAAA	-21	NA	27251557	27256568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_27251586_27253764_27253844_27254219_27254282_27255241_27255355_27256183_27256335_27256435
transcript_52645.known	chr13	+	806	6	FSM	ENSG00000122026.11	ENST00000319826.8	806	6	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	8097.27432164676	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTCTTCATTGAGTAG	27244316	True	NA	0	True	AATAAA	-21	NA	27251582	27256568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_27251851_27253764_27253844_27254219_27254282_27255241_27255355_27256183_27256335_27256435
transcript_52646.known	chr13	+	616	6	FSM	ENSG00000122026.11	ENST00000272274.8	616	6	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_1	7965.98944011351	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTCTTCATTGAGTAG	27244312	True	NA	0	True	AATAAA	-21	NA	27251578	27256568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_27251657_27253764_27253844_27254219_27254282_27255241_27255355_27256183_27256335_27256435
transcript_52647.known	chr13	+	641	6	FSM	ENSG00000122026.11	ENST00000326092.8	641	6	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	8057.76806317978	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTCTTCATTGAGTAG	27244330	True	NA	0	True	AATAAA	-21	NA	27251596	27256568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_27251700_27253764_27253844_27254219_27254282_27255241_27255355_27256183_27256335_27256435
transcript_52649.nic	chr13	+	700	5	ISM	ENSG00000122026.11	ENST00000311549.11	566	6	-294	261	-98	0	5prime_fragment	FALSE	canonical	3	12896	junction_1	3275.45969102048	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTACCTGGGTTCAACTAAA	27251243	False	NA	44	True	AAAAAG	-19	NA	27251263	27256307	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_27251586_27253764_27253844_27254219_27254282_27255241_27255355_27256183
transcript_52650.nic	chr13	+	671	5	ISM	ENSG00000122026.11	ENST00000319826.8	806	6	-25	261	0	0	5prime_fragment	FALSE	canonical	3	88	junction_1	8784.56232190882	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTACCTGGGTTCAACTAAA	27251339	False	NA	44	True	AAAAAG	-19	NA	27251557	27256307	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_27251851_27253764_27253844_27254219_27254282_27255241_27255355_27256183
transcript_52653.nic	chr13	+	501	5	ISM	ENSG00000122026.11	ENST00000326092.8	641	6	-20	261	-2	0	5prime_fragment	FALSE	canonical	3	187	junction_1	8741.80040094716	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTACCTGGGTTCAACTAAA	27244310	True	NA	44	True	AAAAAG	-19	NA	27251576	27256307	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_27251700_27253764_27253844_27254219_27254282_27255241_27255355_27256183
transcript_52659.known	chr13	+	1443	9	FSM	ENSG00000122034.17	ENST00000381140.10	1443	9	0	0	0	0	multi-exon	FALSE	canonical	3	904	junction_2	90.0387937224839	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTGTGGCCTAGATGAG	27414172	True	NA	5	True	ATTAAA	-17	NA	27424618	27435823	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_27424939_27427091_27427193_27429869_27429967_27430532_27430622_27432730_27432805_27434138_27434220_27434804_27435035_27435132_27435193_27435432
transcript_52662.nic	chr13	+	1102	8	ISM	ENSG00000122034.17	ENST00000381140.10	1443	9	-61	642	-61	147	5prime_fragment	FALSE	canonical	3	904	junction_2	96.2539159023185	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGCTCAAAGTAAGTTGA	27414111	True	NA	NA	False	AAGAAA	-2	NA	27424557	27435181	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_27424939_27427091_27427193_27429869_27429967_27430532_27430622_27432730_27432805_27434138_27434220_27434804_27435035_27435132
transcript_52664.known	chr13	+	1191	8	FSM	ENSG00000122034.17	ENST00000419181.5	1191	8	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_4	324.158565381518	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGATTCCTTATCATTT	27414215	True	NA	12	True	ATTAAA	-16	NA	27424661	27435688	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_27424939_27427091_27427193_27429869_27429967_27430532_27430622_27434138_27434220_27434804_27435035_27435132_27435193_27435432
transcript_5267.known	chr1	-	4309	28	FSM	ENSG00000142733.17	ENST00000374040.7	4309	28	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_26	14.5116196761127	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTTGTCCTGGCAATTT	-27366734	False	NA	-9	True	ATTAAA	-14	NA	27366858	27355185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_27355470_27355668_27355746_27356025_27356100_27356387_27356501_27356589_27356750_27357008_27357115_27357399_27357577_27357710_27357877_27358180_27358320_27358418_27358612_27358708_27358867_27359416_27359523_27359857_27359995_27360240_27360369_27360704_27360839_27360920_27361009_27361156_27361253_27361345_27361396_27361519_27361628_27361704_27361868_27362090_27362251_27362640_27362754_27362850_27363022_27363441_27363549_27363916_27364086_27364203_27364395_27364772_27364913_27366257
transcript_52677.known	chr13	-	995	5	FSM	ENSG00000122033.15	ENST00000381120.8	995	5	0	0	0	0	multi-exon	FALSE	canonical	3	497	junction_4	47.91137651957	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGCTCCTTGGTCTGCAG	-27447086	True	NA	-6	True	AATAAA	-23	NA	27450564	27435642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_27435894_27437115_27437274_27439988_27440450_27445087_27445157_27450508
transcript_52679.known	chr13	-	798	5	FSM	ENSG00000122033.15	ENST00000485650.5	798	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	245.353826136867	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAAAAATGTAGACGTGT	-27447113	True	NA	NA	False	CATAAA	-4	NA	27450591	27437149	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_27437274_27439988_27440450_27441016_27441078_27445087_27445157_27450508
transcript_52681.nic	chr13	-	758	4	ISM	ENSG00000122033.15	ENST00000381120.8	995	5	-43	1502	-16	0	5prime_fragment	FALSE	canonical	3	497	junction_3	38.2186690854963	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGTAGACGTGTCAGAA	-27450597	False	NA	NA	False	CATAAA	-9	NA	27450607	27437144	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_27437274_27439988_27440450_27445087_27445157_27450508
transcript_52684.nnic	chr13	+	628	3	NNC	ENSG00000122034.17	novel	688	6	NA	NA	-61	-3428	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_2	552.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAAGGCTTTGCAGAGGA	27414111	True	NA	NA	False	NA	NA	NA	27424557	27429317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr13_+_27424939_27427091_27427193_27429171
transcript_52685.nic	chr13	+	570	3	ISM	ENSG00000122034.17	ENST00000435781.5	688	6	-80	4212	-61	-2788	5prime_fragment	FALSE	canonical	3	904	junction_2	117	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATATATAGTAAGTATGAT	27414111	True	NA	NA	False	AAGAAA	-34	NA	27424557	27429957	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_27424939_27427091_27427193_27429869
transcript_52688.known	chr13	-	877	4	FSM	ENSG00000122033.15	ENST00000471771.5	877	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	267.762747388222	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGTAAGTAAAGAAGGTACAA	-27450031	False	NA	NA	False	CATAAA	-37	NA	27450041	27437116	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_27437274_27439988_27440450_27445087_27445157_27449851
transcript_52690.known	chr13	-	373	3	FSM	ENSG00000122033.15	ENST00000484342.2	373	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	261	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGTCAGCGAGTTATTCA	-27447109	True	NA	NA	False	AATAAA	-28	NA	27450587	27440205	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_27440450_27445087_27445138_27450508
transcript_52691.known	chr13	+	688	6	FSM	ENSG00000122034.17	ENST00000435781.5	688	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	440.053905788825	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAAAAACATGGACGGAAC	27414191	True	NA	NA	False	AAAAAG	-14	NA	27424637	27434169	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_27424939_27427091_27427193_27429869_27429967_27430537_27430622_27432730_27432805_27434138
transcript_52692.known	chr13	-	947	5	FSM	ENSG00000122033.15	ENST00000461838.5	947	5	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_4	249.78090399388	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCAGTAATTTTAATAAAG	-27450121	False	NA	-47	True	NA	NA	NA	27450131	27435683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_27435894_27437115_27437274_27439988_27440450_27445087_27445138_27450063
transcript_52694.known	chr13	-	4750	10	FSM	ENSG00000139517.9	ENST00000316334.5	4750	10	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_7	6.70175948888899	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGACGTTGTCTCTTTTC	-27618418	True	NA	-5	True	AATAAA	-18	NA	27620529	27545912	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_27548471_27550332_27550492_27553207_27553440_27556235_27556414_27559841_27559986_27562412_27562782_27567639_27567840_27569028_27569277_27581296_27581804_27620374
transcript_52707.nic	chr13	+	2284	3	NIC	ENSG00000186184.20	novel	693	2	NA	NA	-637	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	221	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTTTGACTGGTTTCTGT	NA	False	NA	19	True	AATAAA	-19	NA	27620104	27623449	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_27621141_27621336_27622010_27622874
transcript_52708.nic	chr13	+	1610	3	NIC	ENSG00000186184.20	novel	693	2	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	237.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTTTGACTGGTTTCTGT	27619763	True	NA	19	True	AATAAA	-19	NA	27620742	27623449	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_27621105_27621336_27622010_27622874
transcript_52709.known	chr13	+	1606	3	FSM	ENSG00000186184.20	ENST00000621089.2	1606	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	127.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCCCTTTCTACATGCT	27620913	False	NA	NA	False	NA	NA	NA	27620946	27667022	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_27621141_27648378_27648454_27665685
transcript_52710.known	chr13	+	668	2	FSM	ENSG00000186184.20	ENST00000399696.3	668	2	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGACTGGTTTCTGTTCC	27607361	False	NA	22	True	AATAAA	-22	NA	27621953	27623452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_27622010_27622840
transcript_52711.known	chr13	+	2036	3	FSM	ENSG00000186184.20	ENST00000399697.7	2036	3	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_2	14.5	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGCATTCTGTATTTAT	27621767	False	NA	13	True	AATAAA	-19	NA	27621778	27667415	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_27622010_27648378_27648454_27665685
transcript_52712.known	chr13	+	693	2	FSM	ENSG00000186184.20	ENST00000302979.5	693	2	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_1	0	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTTTGACTGGTTTCTGT	27607299	True	NA	19	True	AATAAA	-19	NA	27621891	27623449	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_27622010_27622874
transcript_52713.known	chr13	+	2118	4	FSM	ENSG00000186184.20	ENST00000465887.2	2118	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	132.456282095893	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGTATGCATTCTGTA	27607299	True	NA	8	True	AATAAA	-14	NA	27621891	27667410	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_27622010_27648378_27648454_27650041_27650242_27665685
transcript_52714.known	chr13	-	3826	24	FSM	ENSG00000122025.15	ENST00000241453.12	3826	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.20647277613144	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCCTTCATTTTATTTTT	-28100541	True	NA	NA	False	AATAAA	-19	NA	28100576	28003273	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_28004175_28014451_28014558_28015156_28015257_28015589_28015702_28018466_28018590_28023349_28023478_28024860_28024944_28027087_28027242_28028177_28028289_28033886_28033992_28034081_28034215_28034300_28034408_28035494_28035674_28035934_28036044_28037184_28037289_28048274_28048444_28049383_28049538_28049634_28049775_28050094_28050223_28052544_28052675_28057346_28057463_28061866_28062070_28070490_28070613_28100467
transcript_52715.known	chr13	-	1351	1	FSM	ENSG00000261485.1	ENST00000563843.1	1351	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTCCTCTCAGTTAA	-28138180	False	NA	NA	False	ATTAAA	-18	NA	28138193	28136842	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_28136800_28138200
transcript_52718.known	chr13	+	5590	19	FSM	ENSG00000152520.14	ENST00000380958.8	5590	19	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	9.63676729773098	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCCTTTTCTTGCACGT	28137778	True	NA	NA	False	AATAAA	-17	NA	28138544	28295335	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_28139088_28174271_28174394_28176492_28176560_28177864_28177936_28197184_28197347_28220230_28220379_28256291_28256540_28260446_28260552_28261400_28261459_28266714_28266877_28267094_28267212_28267299_28267402_28270700_28270867_28271980_28272072_28277236_28277377_28280411_28280542_28281314_28281380_28287983_28288123_28292381
transcript_52719.known	chr13	+	4940	18	FSM	ENSG00000152520.14	ENST00000399613.1	4940	18	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	8.48609691380259	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCCTTTTCTTGCACGT	28139022	False	NA	NA	False	AATAAA	-17	NA	28139032	28295335	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_28139088_28174271_28174394_28176492_28176560_28177864_28177936_28220230_28220379_28256291_28256540_28260446_28260552_28261400_28261459_28266714_28266877_28267094_28267212_28267299_28267402_28270700_28270867_28271980_28272072_28277236_28277377_28280411_28280542_28281314_28281380_28287983_28288123_28292381
transcript_52726.known	chr13	-	7123	30	FSM	ENSG00000102755.12	ENST00000282397.9	7123	30	0	0	0	0	multi-exon	TRUE	canonical	3	53	junction_12	76.5910430245042	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTTTCTCCCTGATTTG	-28492009	True	NA	-1	True	AATAAA	-15	NA	28495128	28300345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_28303369_28306677_28306773_28308842_28308928_28311589_28311733_28311992_28312099_28317497_28317598_28319422_28319535_28321462_28321586_28322261_28322360_28322789_28322947_28327461_28327551_28329614_28329729_28334024_28334130_28339167_28339301_28345444_28345552_28357553_28357686_28384884_28385032_28389795_28390105_28396959_28397069_28405779_28405895_28427158_28427319_28427751_28427922_28430049_28430168_28431135_28431311_28433818_28433956_28434057_28434221_28438220_28438346_28466902_28467130_28467520_28467618_28494779
transcript_5273.known	chr1	-	946	6	FSM	ENSG00000174950.11	ENST00000374030.3	946	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	4.60434577328853	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCATGTCCTGTGTCTTGG	-27382875	True	NA	-4	True	AATAAA	-17	NA	27383333	27379175	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_27379510_27380050_27380196_27381779_27381825_27382327_27382400_27382499_27382668_27383151
transcript_52734.known	chr13	-	2969	15	FSM	ENSG00000102755.12	ENST00000541932.5	2969	15	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	52.8169731531562	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTGCCTACTCTGAGCC	-28492009	True	NA	-10	True	ATTAAA	-16	NA	28495128	28368095	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_28368664_28384884_28385032_28389795_28390105_28396959_28397069_28405779_28405895_28427158_28427319_28427751_28427922_28430049_28430168_28431135_28431311_28433818_28433956_28434057_28434221_28438220_28438346_28466902_28467130_28467520_28467618_28494779
transcript_52736.nic	chr13	-	2386	14	ISM	ENSG00000102755.12	ENST00000541932.5	2969	15	0	16804	0	648	5prime_fragment	FALSE	canonical	3	152	junction_1	29.596097615781	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAACAAGAGCCTGGTAAG	-28492009	True	NA	NA	False	TTTAAA	-14	NA	28495128	28384899	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_28385032_28389795_28390105_28396959_28397069_28405779_28405895_28427158_28427319_28427751_28427922_28430049_28430168_28431135_28431311_28433818_28433956_28434057_28434221_28438220_28438346_28466902_28467130_28467520_28467618_28494779
transcript_52740.known	chr13	-	6453	13	FSM	ENSG00000102755.12	ENST00000615840.4	6453	13	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_9	21.1259450807663	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCCTGTTTGGTCTGCTG	-28491960	True	NA	84	True	AATAAA	-20	NA	28495079	28385547	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_28390105_28396959_28397069_28405779_28405895_28427158_28427319_28427751_28427922_28430049_28430168_28431135_28431311_28433818_28433956_28434057_28434221_28438220_28438346_28466902_28467130_28467520_28467618_28494779
transcript_52748.nic	chr13	-	1100	6	ISM	ENSG00000102755.12	ENST00000539099.1	1911	12	-2	34775	-2	-34775	5prime_fragment	FALSE	canonical	3	198	junction_2	26.003076741032	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGACCCATTTTTCTA	-28492011	True	NA	2	True	NA	NA	NA	28495130	28433818	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_28433956_28434057_28434221_28438220_28438346_28466902_28467130_28467520_28467618_28494779
transcript_5275.known	chr1	-	1457	5	FSM	ENSG00000174950.11	ENST00000374027.7	1457	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	3.34477204006491	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCATGTCCTGTGTCTTGG	-27383281	False	NA	-4	True	AATAAA	-17	NA	27383303	27379175	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_27380196_27381779_27381825_27382327_27382400_27382499_27382668_27383151
transcript_52752.known	chr13	+	1428	7	FSM	ENSG00000132963.8	ENST00000460403.1	1428	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	4079.66185962622	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTTTGATTAGATAAATT	28598574	True	NA	NA	False	ATTAAA	-31	NA	28659103	28678925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_28659188_28659821_28659920_28662409_28662508_28664508_28664570_28668472_28668575_28672338_28672433_28678034
transcript_52753.known	chr13	+	1338	6	FSM	ENSG00000132963.8	ENST00000380842.5	1338	6	0	0	0	0	multi-exon	FALSE	canonical	3	7534	junction_1	629.289249868453	2319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGCAATGTCTAGAGACT	28598600	True	NA	NA	False	GATAAA	-17	NA	28659129	28678959	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_28659188_28662409_28662508_28664508_28664570_28668472_28668575_28672338_28672433_28678034
transcript_52758.nnic	chr13	-	4691	14	NNC	ENSG00000139514.13	novel	7343	13	NA	NA	-41	-2556	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	58.719068402716	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAGTTTCACATCTCTTA	-29591164	True	NA	NA	False	AATAAA	-24	NA	29595729	29511969	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr13_-_29514584_29516137_29516247_29517143_29517311_29517572_29517791_29519446_29519550_29522316_29522457_29523265_29523489_29524131_29524254_29530537_29530713_29532823_29532983_29535818_29536203_29553760_29553861_29595415_29595518_29595654
transcript_52760.known	chr13	-	7343	13	FSM	ENSG00000139514.13	ENST00000380752.10	7343	13	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_12	19.8471590466299	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCATGGTGTGATCTCAA	-29591123	True	NA	-18	True	AATAAA	-15	NA	29595688	29509413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_29514584_29516137_29516247_29517143_29517311_29517572_29517791_29519446_29519550_29522316_29522457_29523265_29523489_29524131_29524254_29530537_29530713_29532823_29532983_29535818_29536203_29553760_29553861_29595415
transcript_52765.known	chr13	-	4317	5	FSM	ENSG00000122042.10	ENST00000380680.5	4317	5	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	11.8953772533703	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGTGTATTTGCCTATT	-29849452	True	NA	-2	True	TTTAAA	-18	NA	29850617	29764370	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_29767308_29767617_29767696_29772111_29772199_29777154_29777264_29849511
transcript_52774.known	chr13	-	1634	11	FSM	ENSG00000102781.14	ENST00000380617.7	1634	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_10	6.34350061086148	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTTTAAAAAACAAGTTT	-30306731	False	NA	-28	True	GATAAA	-19	NA	30307026	30208479	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_30208739_30210315_30210443_30227411_30227547_30230467_30230595_30231313_30231473_30240459_30240566_30240958_30241087_30255446_30255616_30280062_30280224_30283615_30283792_30306939
transcript_52775.known	chr13	-	7618	11	FSM	ENSG00000102781.14	ENST00000380615.8	7618	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_6	5.22398315464359	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTTTCTTTGTGGTTCAT	-30307256	True	NA	-4	True	AATAAA	-22	NA	30307551	30202629	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_30208739_30210315_30210443_30227411_30227547_30230467_30230595_30231313_30231473_30240459_30240566_30240958_30241087_30255446_30255616_30280062_30280224_30283615_30283792_30307330
transcript_52788.known	chr13	-	5456	5	FSM	ENSG00000189403.15	ENST00000341423.10	5456	5	0	0	0	0	multi-exon	FALSE	canonical	3	2423	junction_1	3990.78609894091	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGATTTTTACTGGTTTT	-30387004	True	NA	-20	True	NA	NA	NA	30465936	30456703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_30461534_30462537_30462713_30463206_30463353_30463530_30463695_30465795
transcript_52789.known	chr13	-	821	5	FSM	ENSG00000189403.15	ENST00000326004.4	821	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	5000.93553747696	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAAAAAAGGGAGTTGTCA	-30387006	True	NA	NA	False	NA	NA	NA	30465938	30461495	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_30461689_30462537_30462713_30463206_30463353_30463530_30463695_30465795
transcript_52792.known	chr13	-	1282	5	FSM	ENSG00000189403.15	ENST00000399494.5	1282	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	5494.33221602043	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTATTAGTATTGTT	-30386310	False	NA	-31	True	AGTAAA	-6	NA	30465242	30460906	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_30461534_30462537_30462713_30463206_30463353_30463530_30463695_30465072
transcript_52796.known	chr13	-	2319	5	FSM	ENSG00000189403.15	ENST00000339872.8	2319	5	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_4	5491.0238742424	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAGTTAAATGGCTTTCA	-30385378	False	NA	-31	True	AATAAA	-24	NA	30464310	30459849	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_30461534_30462537_30462713_30463206_30463353_30463530_30463695_30464160
transcript_52805.nic	chr13	-	667	4	ISM	ENSG00000189403.15	ENST00000326004.4	821	5	-48	1051	-48	-201	5prime_fragment	FALSE	canonical	3	10105	junction_3	1092.30408871441	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAAAAGGTAAGAAGTGT	NA	False	NA	NA	False	NA	NA	NA	30465986	30462546	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_30462713_30463206_30463353_30463530_30463695_30465795
transcript_52807.nic	chr13	-	422	3	ISM	ENSG00000189403.15	ENST00000326004.4	821	5	-48	1790	-48	25	5prime_fragment	FALSE	canonical	3	10105	junction_2	1333.5	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAATGAAAACCTATATC	NA	False	NA	5	True	NA	NA	NA	30465986	30463285	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_30463353_30463530_30463695_30465795
transcript_52808.known	chr13	-	503	2	FSM	ENSG00000189403.15	ENST00000468384.1	503	2	0	0	0	0	multi-exon	FALSE	canonical	3	10105	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCGGACAAGGCCCGTTA	-30386982	True	NA	19	True	NA	NA	NA	30465914	30463310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_30463695_30465795
transcript_52809.known	chr13	+	4894	9	FSM	ENSG00000132952.12	ENST00000255304.9	4894	9	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	17.900768139943	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACCTGTTTTTGTGATGA	30615712	True	NA	NA	False	AATAAA	-28	NA	30617919	30660766	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_30618057_30621072_30621240_30621763_30621893_30630834_30631475_30637743_30637858_30642627_30642758_30646931_30647058_30653147_30653306_30657473
transcript_5281.known	chr1	+	2137	2	FSM	ENSG00000181773.7	ENST00000374024.4	2137	2	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	0	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCCCTATGTGTGTG	27391690	True	NA	NA	False	AATAAA	-19	NA	27392621	27395814	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27392738_27393793
transcript_52823.known	chr13	+	2294	5	FSM	ENSG00000102802.10	ENST00000380482.9	2294	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.40832691319598	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCTTTCCATTGTGGT	NA	False	NA	15	True	ATTAAA	-19	NA	30906270	30925572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_30906794_30917402_30917513_30921013_30921127_30921560_30921847_30924310
transcript_52825.nnic	chr13	+	736	4	NNC	ENSG00000236094.3	novel	641	3	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	65.2805909559308	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCAATACATTTGCGTA	NA	False	NA	9	True	AATAAA	-18	NA	30863337	30883395	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr13_+_30863579_30875273_30875367_30882559_30882660_30883093
transcript_52827.nnic	chr13	+	684	4	NNC	ENSG00000236094.3	novel	641	3	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	71.2008114810186	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCAATACATTTGCGTA	30863299	True	NA	9	True	AATAAA	-18	NA	30863348	30883395	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr13_+_30863579_30881952_30882005_30882559_30882660_30883093
transcript_52829.nnic	chr13	+	641	3	FSM	ENSG00000236094.3	ENST00000690833.1	641	3	-29	29	-29	0	multi-exon	FALSE	canonical	3	73	junction_1	49.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCAATACATTTGCGTA	NA	False	NA	9	True	AATAAA	-18	NA	30863339	30883395	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_30863579_30882559_30882660_30883093
transcript_52833.known	chr13	-	5244	18	FSM	ENSG00000120694.20	ENST00000320027.10	5244	18	0	0	0	0	multi-exon	TRUE	canonical	3	768	junction_12	92.9664894792202	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAATTTTGAGTCTACTT	-31145409	True	NA	NA	False	NA	NA	NA	31161904	31134972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_31137525_31138406_31138569_31138780_31138901_31138999_31139108_31140183_31140310_31141121_31141260_31143791_31143924_31145562_31145769_31147958_31148093_31148373_31148481_31149953_31150183_31150946_31151192_31151608_31151743_31152851_31152952_31154632_31154756_31155513_31155655_31158805_31158864_31161475
transcript_52834.known	chr13	-	3570	18	FSM	ENSG00000120694.20	ENST00000630972.2	3570	18	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_17	226.783511847036	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGATTTTGTCACTAAT	NA	False	NA	-5	True	AATAAA	-27	NA	31162388	31136624	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_31137525_31138406_31138569_31138780_31138901_31138999_31139108_31140183_31140310_31141121_31141260_31143791_31143924_31145562_31145769_31147958_31148093_31148373_31148481_31149953_31150183_31150946_31151192_31151608_31151743_31152851_31152952_31154632_31154756_31155513_31155655_31158805_31158864_31161981
transcript_52842.known	chr13	-	3480	17	FSM	ENSG00000120694.20	ENST00000380405.7	3480	17	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_6	233.381854144126	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTTGATTTTGTCACT	-31145432	True	NA	-8	True	AATAAA	-24	NA	31161927	31136627	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_31137525_31138406_31138569_31138780_31138901_31138999_31139108_31140183_31140310_31141121_31141260_31145562_31145769_31147958_31148093_31148373_31148481_31149953_31150183_31150946_31151192_31151608_31151743_31152851_31152952_31154632_31154756_31155513_31155655_31158805_31158864_31161475
transcript_52846.nic	chr13	-	2799	17	ISM	ENSG00000120694.20	ENST00000320027.10	5244	18	-112	3439	23	127	5prime_fragment	FALSE	canonical	3	768	junction_11	94.8775526665818	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGGTGAGTGTTACTGTC	-31145521	True	NA	18	True	ATTAAA	-8	NA	31162016	31138411	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_31138569_31138780_31138901_31138999_31139108_31140183_31140310_31141121_31141260_31143791_31143924_31145562_31145769_31147958_31148093_31148373_31148481_31149953_31150183_31150946_31151192_31151608_31151743_31152851_31152952_31154632_31154756_31155513_31155655_31158805_31158864_31161475
transcript_52851.nic	chr13	-	2325	14	ISM	ENSG00000120694.20	ENST00000320027.10	5244	18	-112	5300	23	-1734	5prime_fragment	FALSE	canonical	3	768	junction_8	96.9751386428135	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATGATGCTAAAAATGCA	-31145521	True	NA	NA	False	GATAAA	-14	NA	31162016	31140272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_31140310_31141121_31141260_31143791_31143924_31145562_31145769_31147958_31148093_31148373_31148481_31149953_31150183_31150946_31151192_31151608_31151743_31152851_31152952_31154632_31154756_31155513_31155655_31158805_31158864_31161475
transcript_52857.nic	chr13	-	2133	12	ISM	ENSG00000120694.20	ENST00000320027.10	5244	18	-112	8836	23	-5270	5prime_fragment	FALSE	canonical	3	768	junction_6	66.2069133240693	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAGATGCTGACAAAGTG	-31145521	True	NA	-18	True	AAGAAA	-7	NA	31162016	31143808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_31143924_31145562_31145769_31147958_31148093_31148373_31148481_31149953_31150183_31150946_31151192_31151608_31151743_31152851_31152952_31154632_31154756_31155513_31155655_31158805_31158864_31161475
transcript_52874.known	chr13	+	4215	15	FSM	ENSG00000187676.8	ENST00000343307.5	4215	15	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_13	7.02655313646683	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGAACACTTTCTTACAAA	31199153	True	NA	NA	False	AATAAA	-22	NA	31199974	31332276	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_31200155_31215050_31215101_31222951_31222992_31229184_31229295_31247022_31247100_31247854_31247967_31260945_31261083_31269213_31269278_31274508_31274629_31276701_31276772_31284647_31284762_31286719_31286820_31317565_31317686_31323750_31323896_31329500
transcript_52890.nic	chr13	+	1291	10	ISM	ENSG00000139618.17	ENST00000380152.8	11954	27	-55	67753	-52	-776	5prime_fragment	FALSE	canonical	3	12	junction_9	4.46661138716484	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAAGTGAAAGAAAAATACT	32313178	True	NA	NA	False	NA	NA	NA	32315452	32332515	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_32315668_32316421_32316528_32319076_32319326_32325075_32325185_32326100_32326151_32326241_32326283_32326498_32326614_32329442_32329493_32330918_32331031_32332271
transcript_52891.nic	chr13	+	2067	10	ISM	ENSG00000139618.17	ENST00000380152.8	11954	27	-55	66977	-52	0	5prime_fragment	FALSE	canonical	3	12	junction_9	4.46661138716484	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACCGAAAGACCAAAAATCA	32313178	True	NA	NA	False	TATAAA	-11	NA	32315452	32333291	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_32315668_32316421_32316528_32319076_32319326_32325075_32325185_32326100_32326151_32326241_32326283_32326498_32326614_32329442_32329493_32330918_32331031_32332271
transcript_52897.known	chr13	+	2011	10	FSM	ENSG00000139618.17	ENST00000530893.6	2011	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7.94425019187532	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACCGAAAGACCAAAAATCA	32313230	True	NA	NA	False	TATAAA	-11	NA	32315504	32333291	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_32315668_32316421_32316524_32319076_32319326_32325075_32325185_32326100_32326151_32326241_32326283_32326498_32326614_32329442_32329493_32330918_32331031_32332271
transcript_52902.known	chr13	-	5649	7	FSM	ENSG00000244754.9	ENST00000674349.1	5649	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	91.6333272705224	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTTAAGAGGATATGAAAT	-32532852	True	NA	NA	False	NA	NA	NA	32538825	32514019	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_32518004_32521372_32521450_32522181_32522271_32527407_32527533_32535768_32537028_32538617_32538685_32538777
transcript_52904.known	chr13	-	9427	6	FSM	ENSG00000244754.9	ENST00000267068.5	9427	6	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_3	16.8237926758505	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAAGTTGGATTTTTTTA	-32532809	True	NA	-6	True	AATAAA	-16	NA	32538782	32510291	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_32518004_32521372_32521450_32522181_32522271_32527407_32527533_32535768_32537028_32538617
transcript_52905.known	chr13	-	2053	6	FSM	ENSG00000244754.9	ENST00000674484.1	2053	6	0	0	0	0	multi-exon	TRUE	canonical	3	75	junction_5	77.6468930479514	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAATGTTTTTATATTC	-32532829	True	NA	-11	True	AATAAA	-17	NA	32538802	32517620	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_32518004_32521372_32521450_32522181_32522271_32527407_32527533_32535768_32537028_32538682
transcript_52909.known	chr13	-	2701	6	FSM	ENSG00000244754.9	ENST00000674465.1	2701	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	100.536560514074	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTCATTTCAGAGGTCT	-32532852	True	NA	-7	True	ATTAAA	-10	NA	32538825	32516900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_32518004_32521372_32521450_32522181_32522271_32527407_32527533_32535768_32537028_32538777
transcript_52914.known	chr13	-	2181	3	FSM	ENSG00000244754.9	ENST00000674433.1	2181	3	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_2	19	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACAAAAAGTGTGCCTGG	-32532852	True	NA	NA	False	AAAAAG	-30	NA	32538825	32526818	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_32527533_32535768_32537028_32538617
transcript_52915.known	chr13	-	2055	3	FSM	ENSG00000244754.9	ENST00000674494.1	2055	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	103.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTGGGGACTTTAAAAAAA	-32532842	True	NA	NA	False	NA	NA	NA	32538815	32526869	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_32527533_32535768_32537028_32538682
transcript_52916.known	chr13	-	1919	3	FSM	ENSG00000244754.9	ENST00000512755.2	1919	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	132.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTGTTTATCATTAATA	-32532853	True	NA	NA	False	AATACA	-22	NA	32538826	32526921	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_32527533_32535768_32537028_32538777
transcript_52917.known	chr13	-	3573	3	FSM	ENSG00000244754.9	ENST00000483088.2	3573	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	112.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGACAGATTGAGACCCTG	-32532846	True	NA	NA	False	NA	NA	NA	32538819	32533563	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_32537028_32538617_32538685_32538777
transcript_52920.known	chr13	-	3691	2	FSM	ENSG00000244754.9	ENST00000674369.1	3691	2	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTCTCAAAAAAAAAAAAAAA	-32532852	True	NA	NA	False	NA	NA	NA	32538825	32533544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_32537028_32538617
transcript_52921.known	chr13	-	3626	2	FSM	ENSG00000244754.9	ENST00000674276.1	3626	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTCTCAAAAAAAAAAAAAAA	-32532852	True	NA	NA	False	NA	NA	NA	32538825	32533544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_32537028_32538682
transcript_52922.known	chr13	-	3518	2	FSM	ENSG00000244754.9	ENST00000674462.1	3518	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTGAGACCCTGTCTCAA	-32532852	True	NA	NA	False	NA	NA	NA	32538825	32533557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_32537028_32538777
transcript_52928.known	chr13	-	2999	5	FSM	ENSG00000139597.18	ENST00000380130.7	2999	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	2.58602010819715	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTATGATGCAGTATGT	-32428088	False	NA	NA	False	AATAAA	-22	NA	32428130	32400722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_32403201_32404320_32404398_32407249_32407339_32407644_32407773_32427903
transcript_52929.known	chr13	+	7472	35	FSM	ENSG00000083642.19	ENST00000315596.15	7472	35	0	0	0	0	multi-exon	TRUE	canonical	2	117	junction_3	23.6819504071456	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTATTATTTTGTG	32580108	True	NA	NA	False	AATAAA	-13	NA	32586451	32778019	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_32586594_32648753_32648881_32651803_32652008_32658238_32658326_32658433_32658532_32659153_32659281_32667763_32667845_32673215_32673357_32675843_32675960_32678834_32678930_32683877_32684024_32687133_32687286_32688455_32688570_32694222_32694305_32696853_32696903_32699729_32699870_32701322_32701439_32706933_32707040_32709945_32710107_32732100_32732225_32735171_32735331_32741079_32741149_32742590_32742728_32745976_32746101_32753331_32753537_32755841_32755957_32758086_32758220_32758533_32758654_32759627_32759691_32760574_32760721_32764488_32764595_32770120_32770561_32770653_32770762_32773188_32773325_32775016
transcript_5293.known	chr1	-	5681	9	FSM	ENSG00000158195.11	ENST00000618852.5	5681	9	0	0	0	0	multi-exon	FALSE	canonical	3	407	junction_1	50.2792203599061	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACCTCTGGTGTTTGTGG	-27477723	True	NA	-6	True	GATAAA	-18	NA	27490167	27404229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_27408347_27409691_27410207_27412571_27412728_27414832_27414964_27415984_27416103_27418268_27418423_27418953_27419089_27428760_27428934_27489985
transcript_52947.known	chr13	-	5915	14	FSM	ENSG00000133121.21	ENST00000336934.10	5915	14	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_13	2.29225606550021	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGTTGATTTTCATGCT	-33285546	True	NA	NA	False	AATAAA	-37	NA	33285755	33103136	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_33105711_33106757_33106935_33109872_33110091_33110685_33110908_33111777_33111893_33112720_33112932_33118064_33118264_33126080_33126241_33127372_33127547_33128928_33130290_33142309_33142374_33165336_33165419_33167550_33167623_33285469
transcript_52952.known	chr13	+	2306	9	FSM	ENSG00000133119.13	ENST00000380071.8	2306	9	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_8	34.069552022297	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTAAGTCTTTTTGTGGA	33810592	True	NA	14	True	AATAAA	-18	NA	33818148	33837500	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_33818266_33821131_33821270_33823916_33823985_33825788_33825887_33829835_33830018_33830718_33830856_33831255_33831355_33835147_33835218_33836103
transcript_52954.known	chr13	+	1461	9	FSM	ENSG00000133119.13	ENST00000434425.5	1461	9	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_8	151.01567592472	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGTCTGCTATTTTCT	33810512	True	NA	16	True	AATAAA	-27	NA	33818068	33966558	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_33818266_33821131_33821270_33823916_33823985_33825788_33825887_33829835_33830018_33830718_33830856_33831255_33831355_33835147_33835218_33966086
transcript_52964.known	chr13	+	11200	59	FSM	ENSG00000172915.20	ENST00000379939.7	11200	59	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_24	10.4748722603377	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGACTGTTTCAGATTTCAT	34936543	True	NA	11	True	AATAAA	-17	NA	34942269	35672736	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_34943115_35040932_35041165_35044946_35045048_35045305_35045402_35048562_35048685_35050268_35050396_35056009_35056130_35058716_35058864_35069907_35070106_35070718_35070853_35098296_35098406_35109289_35109443_35110809_35110979_35117413_35117494_35118227_35118291_35118376_35118475_35123481_35123575_35142268_35142378_35155773_35155856_35156082_35156207_35157077_35157271_35159015_35160033_35161749_35161968_35164355_35164510_35168986_35168996_35171271_35171453_35173463_35173595_35176995_35177104_35182359_35182529_35183975_35184072_35195863_35196303_35208699_35208855_35211052_35211180_35232491_35232620_35290388_35290451_35309527_35309593_35349107_35349217_35352156_35352324_35432268_35432394_35452091_35452236_35472399_35472537_35550476_35550595_35550929_35551033_35554986_35555103_35566904_35567018_35583897_35584039_35593327_35593448_35606425_35606579_35628080_35628249_35645868_35645932_35646258_35646349_35649654_35649848_35651804_35651877_35654854_35655011_35655578_35655750_35665084_35665187_35667373_35667571_35668367_35668520_35670900
transcript_52969.known	chr13	-	2901	1	FSM	ENSG00000180660.8	ENST00000379919.6	2901	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTATGTCAAACCTTAT	NA	False	NA	NA	False	AATAAA	-21	NA	35476689	35473788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_35473800_35476700
transcript_52970.known	chr13	-	8394	17	FSM	ENSG00000133083.15	ENST00000360631.8	8394	17	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_12	11.7200415954893	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTATTTTATCCTTCAAC	-36130717	True	NA	NA	False	AATAAA	-15	NA	36131382	35768651	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_35774700_35793365_35793480_35805698_35805780_35808223_35808321_35809017_35809096_35810834_35810969_35822728_35822876_35827634_35827755_35828249_35828308_35836032_35836142_35839091_35839177_35854498_35854594_35871223_35871341_35947357_35947458_36111868_36112216_36125761_36126157_36131113
transcript_52971.known	chr13	-	4612	13	FSM	ENSG00000133083.15	ENST00000379893.5	4612	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	10.506611674983	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTTTTGTGTTCAATG	-35854704	True	NA	-4	True	AATAAA	-14	NA	35855642	35771338	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_35774700_35793365_35793480_35805698_35805780_35808223_35808321_35809017_35809096_35810834_35810969_35822728_35822876_35827634_35827755_35828249_35828308_35836032_35836142_35839091_35839177_35854498_35854594_35855509
transcript_52976.known	chr13	-	2101	7	FSM	ENSG00000133083.15	ENST00000379892.4	2101	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	6.84957419601151	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATATACATAATTTTTTAA	-36130641	True	NA	NA	False	NA	NA	NA	36131306	35849922	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_35850777_35854498_35854594_35871223_35871341_35947357_35947458_36111868_36112216_36125761_36126157_36131113
transcript_52981.known	chr13	-	5247	3	FSM	ENSG00000133083.15	ENST00000460982.1	5247	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	7.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGTTCAGTGAGTTTC	-35855761	False	NA	0	True	AATAAA	-15	NA	35855784	35845899	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_35850777_35854498_35854594_35855509
transcript_52989.known	chr13	-	2051	16	FSM	ENSG00000250709.1	ENST00000511166.1	2051	16	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_10	72.339016673807	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGCTACAAGAACAAATGG	-36293914	True	NA	NA	False	NA	NA	NA	36297842	36168793	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_36169055_36170530_36170788_36173691_36173811_36174475_36174568_36174721_36174870_36189945_36190057_36191794_36191895_36193620_36193726_36193805_36193868_36201878_36202094_36227347_36227382_36248605_36248683_36253802_36253857_36254044_36254144_36283591_36283703_36297636
transcript_52990.nnic	chr13	-	2657	16	NIC	ENSG00000250709.1	novel	2051	16	NA	NA	-25	574	combination_of_known_splicesites	FALSE	canonical	3	60	junction_5	76.9665439583257	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCATTGTAATCCATTTT	-36293939	True	NA	-15	True	AATAAA	-18	NA	36297867	36168219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_36169055_36170530_36170788_36173691_36173811_36174475_36174568_36174721_36174870_36189945_36190057_36191794_36191895_36193620_36193726_36193805_36193868_36201878_36202094_36248605_36248683_36253802_36253857_36254044_36254144_36283468_36283510_36283591_36283703_36297636
transcript_52991.nnic	chr13	-	2616	15	NIC	ENSG00000250709.1	novel	2051	16	NA	NA	-25	574	combination_of_known_splicesites	FALSE	canonical	3	60	junction_5	71.2341998234682	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCATTGTAATCCATTTT	-36293939	True	NA	-15	True	AATAAA	-18	NA	36297867	36168219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_36169055_36170530_36170788_36173691_36173811_36174475_36174568_36174721_36174870_36189945_36190057_36191794_36191895_36193620_36193726_36193805_36193868_36201878_36202094_36248605_36248683_36253802_36253857_36254044_36254144_36283591_36283703_36297636
transcript_53.known	ERCC-00145	+	1024	1	FSM	ERCC-00145A	DQ875386	1024	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	379	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00145_+_0_1000
transcript_53000.known	chr13	-	837	8	FSM	ENSG00000242715.8	ENST00000503173.5	837	8	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	60.5774929578736	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAAAAGATTGGGACCCA	-36293821	True	NA	46	True	NA	NA	NA	36297749	36227119	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_36227382_36248605_36248683_36253802_36253857_36254044_36254144_36283468_36283510_36283591_36283703_36295777_36295858_36297636
transcript_53001.known	chr13	-	854	8	FSM	ENSG00000242715.8	ENST00000506800.5	854	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	110.946208698134	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAAAAGATTGGGACCCA	-36293821	True	NA	46	True	NA	NA	NA	36297749	36227119	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_36227382_36240569_36240667_36248605_36248683_36253802_36253857_36254044_36254144_36283468_36283510_36283591_36283703_36297636
transcript_53007.known	chr13	-	1158	8	FSM	ENSG00000242715.8	ENST00000239859.8	1158	8	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	63.5259869691779	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAAGTCCATTTTAAG	-36293886	True	NA	NA	False	TTTAAA	-22	NA	36297814	36230774	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_36231293_36248605_36248683_36253802_36253857_36254044_36254144_36283468_36283510_36283591_36283703_36295777_36295858_36297636
transcript_53009.known	chr13	-	753	7	FSM	ENSG00000242715.8	ENST00000491049.6	753	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	88.3240561166033	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAAAAGATTGGGACCCA	-36293821	True	NA	46	True	NA	NA	NA	36297749	36227119	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_36227382_36248605_36248683_36253802_36253857_36254044_36254144_36283468_36283506_36283591_36283703_36297636
transcript_53012.known	chr13	-	624	7	FSM	ENSG00000242715.8	ENST00000379862.6	624	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	90.2016260016045	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTCCATTTATAAT	-36293823	True	NA	-95	True	NA	NA	NA	36297751	36231161	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_36231293_36248605_36248683_36253802_36253857_36254044_36254144_36283468_36283506_36283591_36283703_36297636
transcript_53015.known	chr13	-	716	6	FSM	ENSG00000242715.8	ENST00000239860.10	716	6	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_4	86.4097216752837	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAAAAGATTGGGACCCA	-36293821	True	NA	46	True	NA	NA	NA	36297749	36227119	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_36227382_36248605_36248683_36253802_36253857_36254044_36254144_36283591_36283703_36297636
transcript_53023.known	chr13	-	1632	5	FSM	ENSG00000242715.8	ENST00000477250.1	1632	5	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	66.3720573735665	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGTATAGTATTTCAT	-36293904	True	NA	-2	True	AATAAA	-17	NA	36297832	36280056	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_36281261_36283468_36283510_36283591_36283703_36295777_36295858_36297636
transcript_53030.nic	chr13	-	1598	4	NIC	ENSG00000242715.8	novel	1632	5	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	86.7422747120585	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGTATAGTATTTCAT	-36293950	True	NA	-2	True	AATAAA	-17	NA	36297878	36280056	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_36281261_36283468_36283510_36283591_36283703_36297636
transcript_53033.nic	chr13	-	1868	4	NIC	ENSG00000242715.8	novel	887	3	NA	NA	-1	896	combination_of_known_junctions	FALSE	canonical	3	79	junction_1	52.1557496564111	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATCTCTCTTTTATTGT	-36293910	True	NA	NA	False	ATTAAA	-22	NA	36297838	36281931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_36283407_36283591_36283703_36295777_36295858_36297636
transcript_53036.known	chr13	-	887	3	FSM	ENSG00000242715.8	ENST00000485600.1	887	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	38	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTTAGGGCATATCTAAG	-36293909	True	NA	NA	False	AGTAAA	-2	NA	36297837	36282827	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_36283407_36283591_36283699_36297636
transcript_53040.known	chr13	-	3018	10	FSM	ENSG00000133104.14	ENST00000494062.2	3018	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	363.450881426743	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTATCATATCTGCTT	-36335807	False	68	-12	True	ATTAAA	-17	NA	36346493	36303601	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_36304633_36312144_36312236_36312318_36312478_36314226_36314422_36326574_36326699_36329361_36329518_36331398_36331597_36335020_36335833_36336286_36336359_36346313
transcript_53041.nnic	chr13	-	3081	10	NIC	ENSG00000133104.14	novel	3018	10	NA	NA	-27	0	combination_of_known_splicesites	FALSE	canonical	3	189	junction_9	318.920323653897	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTATCATATCTGCTT	NA	False	NA	-12	True	ATTAAA	-17	NA	36346824	36303601	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_36304633_36312144_36312236_36312318_36312478_36314226_36314422_36326574_36326699_36329361_36329518_36331398_36331597_36335020_36335833_36336286_36336359_36346581
transcript_53043.nnic	chr13	-	2962	10	NIC	ENSG00000133104.14	novel	3018	10	NA	NA	-27	-119	combination_of_known_splicesites	FALSE	canonical	3	189	junction_9	318.920323653897	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGTATTGAGACTGTA	NA	False	NA	-12	True	AATAAA	-19	NA	36346824	36303720	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_36304633_36312144_36312236_36312318_36312478_36314226_36314422_36326574_36326699_36329361_36329518_36331398_36331597_36335020_36335833_36336286_36336359_36346581
transcript_53049.known	chr13	-	4900	9	FSM	ENSG00000133104.14	ENST00000438666.7	4900	9	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_8	307.883805192803	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTCTTGACCTCC	-36335708	False	10686	1	True	TATAAA	-21	NA	36346394	36301637	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_36304633_36312144_36312236_36312318_36312478_36314226_36314422_36326574_36326699_36329361_36329518_36331398_36331597_36335020_36335833_36346224
transcript_53051.known	chr13	-	4944	9	FSM	ENSG00000133104.14	ENST00000451493.5	4944	9	0	0	0	0	multi-exon	FALSE	canonical	3	785	junction_8	78.4624711247358	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTGTTTTCTTGACCT	NA	False	NA	-1	True	TATAAA	-19	NA	36346797	36301639	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_36304633_36312144_36312236_36312318_36312478_36314226_36314422_36326574_36326699_36329361_36329518_36331398_36331597_36335020_36335833_36346581
transcript_53064.known	chr13	+	556	5	FSM	ENSG00000120664.11	ENST00000488319.5	556	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.54950975679639	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCATCCTCTACTTTAG	36346348	False	NA	NA	False	AATACA	-44	NA	36346430	36369601	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_36346508_36365499_36365605_36365729_36365844_36368197_36368344_36369487
transcript_53067.known	chr13	-	2001	5	FSM	ENSG00000133104.14	ENST00000495510.1	2001	5	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_4	402.829601072215	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTACTAGTTTATGATAT	-36335597	False	86	NA	False	AATAAA	-15	NA	36346283	36325922	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_36326699_36329361_36329518_36331398_36331597_36335020_36335833_36346224
transcript_53071.nic	chr13	-	1441	5	ISM	ENSG00000133104.14	ENST00000451493.5	4944	9	19	24981	-1	-698	5prime_fragment	FALSE	canonical	3	785	junction_4	97.6037909099846	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTACCTGAATGGAGTGA	-36336092	True	NA	NA	False	AAGAAA	-9	NA	36346778	36326620	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_36326699_36329361_36329518_36331398_36331597_36335020_36335833_36346581
transcript_53077.known	chr13	-	796	2	FSM	ENSG00000133104.14	ENST00000494703.1	796	2	0	0	0	0	multi-exon	FALSE	canonical	3	785	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTTATAGGAATCATTCT	-36336091	True	NA	NA	False	NA	NA	NA	36346777	36335232	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_36335833_36346581
transcript_53078.known	chr13	+	1699	9	FSM	ENSG00000133101.10	ENST00000625767.1	1699	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	4.49826355386165	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTGTTAGATTTATTTA	36432126	False	NA	NA	False	AATAAA	-16	NA	36432522	36442870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_36432730_36433035_36433222_36437628_36437876_36438066_36438192_36438643_36438868_36439978_36440184_36441117_36441232_36442170_36442305_36442613
transcript_53079.known	chr13	+	1730	9	FSM	ENSG00000133101.10	ENST00000255465.7	1730	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	5.91607978309962	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTGTTAGATTTATTTA	36432098	True	NA	NA	False	AATAAA	-16	NA	36432494	36442870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_36432730_36433032_36433222_36437628_36437876_36438066_36438192_36438643_36438868_36439978_36440184_36441117_36441232_36442170_36442305_36442613
transcript_5308.nic	chr1	-	787	5	ISM	ENSG00000158195.11	ENST00000536657.1	1083	8	-141	7788	-25	-7788	5prime_fragment	FALSE	canonical	3	523	junction_2	27.8298401001515	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGGGAAAGGGGCCTCT	-27490178	False	NA	0	True	NA	NA	NA	27490192	27415984	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_27416103_27418268_27418423_27418953_27419089_27428760_27428934_27489985
transcript_53080.known	chr13	+	2306	3	FSM	ENSG00000133111.4	ENST00000255476.3	2306	3	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_2	3	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGCTGATTTCTTTATTC	36817166	True	NA	21	True	ATTAAA	-21	NA	36819221	36829104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_36819958_36825427_36825536_36827642
transcript_53085.known	chr13	-	2923	26	FSM	ENSG00000102710.21	ENST00000350612.11	2923	26	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	108.254987875848	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGGCTGTTTATTTGG	-37053954	True	NA	0	True	AATACA	-25	NA	37059688	37009311	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_37009810_37010551_37010656_37012191_37012298_37017244_37017365_37019341_37019398_37021447_37021603_37022010_37022081_37024034_37024194_37024339_37024443_37025319_37025438_37026203_37026237_37026789_37026817_37028147_37028306_37029764_37029837_37031566_37031624_37031738_37031896_37033448_37033589_37040404_37040459_37040575_37040693_37044077_37044182_37045246_37045374_37047534_37047602_37047877_37047937_37048563_37048600_37051487_37051584_37059558
transcript_531.known	chr1	-	837	3	FSM	ENSG00000160087.21	ENST00000461142.3	837	3	0	0	0	0	multi-exon	FALSE	canonical	3	470	junction_1	16.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCGACTACCAAGGCTGATC	-1264074	True	NA	NA	False	GGGGCT	-40	NA	1273837	1262852	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1263387_1267861_1267993_1273665
transcript_53105.known	chr13	-	2625	25	FSM	ENSG00000102710.21	ENST00000464744.5	2625	25	0	0	0	0	multi-exon	FALSE	canonical	2	40	junction_24	127.323379846576	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGAGTTTCTACTTTTTG	-37053698	False	NA	-26	True	TTTAAA	-25	NA	37059432	37009616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_37009810_37012191_37012298_37017244_37017365_37019341_37019398_37021447_37021603_37022010_37022081_37024034_37024194_37024339_37024443_37025319_37025438_37026203_37026237_37026789_37026817_37028147_37028306_37029764_37029837_37031566_37031624_37031738_37031896_37033448_37033589_37040404_37040459_37040575_37040693_37044077_37044182_37045246_37045377_37047534_37047602_37047877_37047937_37048563_37048600_37051487_37051584_37059194
transcript_53106.known	chr13	-	2681	25	FSM	ENSG00000102710.21	ENST00000356185.7	2681	25	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_24	121.178128756343	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGGTTGGTTTGCCTAAG	-37053916	True	NA	-44	True	AATAAA	-23	NA	37059650	37009493	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_37009810_37012191_37012298_37017244_37017365_37019341_37019398_37021447_37021603_37022010_37022081_37024034_37024194_37024339_37024443_37025319_37025438_37026203_37026237_37026789_37026817_37028147_37028306_37029764_37029837_37031566_37031624_37031738_37031896_37033448_37033589_37040404_37040459_37040575_37040693_37044077_37044182_37045246_37045377_37047534_37047602_37047877_37047937_37048563_37048600_37051487_37051584_37059479
transcript_53107.known	chr13	-	2843	25	FSM	ENSG00000102710.21	ENST00000360252.8	2843	25	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_20	92.4143372113993	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGGTGGCTGTTTAT	-37053979	True	NA	-4	True	AATACA	-21	NA	37059713	37009315	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_37009810_37012191_37012298_37017244_37017365_37019341_37019398_37021447_37021603_37022010_37022081_37024034_37024194_37024339_37024443_37025319_37025438_37026203_37026237_37026789_37026817_37028147_37028306_37029764_37029837_37031566_37031624_37031738_37031896_37033448_37033589_37040404_37040459_37040575_37040693_37044077_37044182_37045246_37045377_37047534_37047602_37047877_37047937_37048563_37048600_37051487_37051584_37059558
transcript_53110.known	chr13	-	2836	25	FSM	ENSG00000102710.21	ENST00000475892.5	2836	25	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_6	94.7504031067356	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGTTGGTTTGCCTAAGT	-37053915	True	NA	-43	True	AATAAA	-24	NA	37059649	37009492	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_37009810_37012191_37012298_37017244_37017365_37019341_37019398_37021447_37021603_37022010_37022318_37024034_37024194_37024339_37024443_37025319_37025438_37026203_37026237_37026789_37026817_37028147_37028306_37029764_37029837_37031566_37031624_37031738_37031896_37033448_37033589_37040404_37040459_37040575_37040693_37044077_37044182_37045246_37045374_37047534_37047602_37047877_37047937_37048563_37048600_37051487_37051584_37059558
transcript_53141.nic	chr13	+	1932	11	FSM	ENSG00000120699.14	ENST00000692143.1	3630	11	4	1694	0	0	multi-exon	FALSE	canonical	0	0	junction_10	766.203687018015	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTCTATTATTTCTTA	36986997	True	NA	26	True	AATAAA	-24	NA	37000785	37009401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_37001802_37002272_37002310_37002487_37002552_37002933_37003008_37004515_37004562_37005919_37006026_37006114_37006161_37006974_37007072_37008056_37008178_37008728_37008836_37009183
transcript_53150.known	chr13	-	1219	10	FSM	ENSG00000120697.10	ENST00000239891.4	1219	10	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_7	29.1653438853482	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTCTTTTGTTTGTTTA	-36995728	True	NA	9	True	TATAAA	-33	NA	36999340	36949737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995036_36995424_36995597_36999234
transcript_53151.known	chr13	-	1057	10	FSM	ENSG00000120697.10	ENST00000681893.1	1057	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_9	135.540982823246	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCTTTTGATAATTTTAA	-37000721	False	20	-12	True	AATAAA	-15	NA	37000741	36949838	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995036_36995424_36995597_37000696
transcript_53152.known	chr13	+	694	9	FSM	ENSG00000120699.14	ENST00000239893.9	694	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	816.347965024719	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCATGTTCCCGCCACTTC	36986994	True	NA	NA	False	NA	NA	NA	37000782	37008833	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_37000823_37002487_37002552_37002933_37003008_37004515_37004562_37005919_37006026_37006114_37006161_37006974_37007072_37008061_37008178_37008728
transcript_53156.known	chr13	-	1417	9	FSM	ENSG00000120697.10	ENST00000681553.1	1417	9	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_7	30.9311230801599	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTCATTTCATTTGAAA	-36995700	True	NA	-74	True	NA	NA	NA	36999312	36949900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995597_36999234
transcript_53157.known	chr13	-	1064	9	FSM	ENSG00000120697.10	ENST00000681043.1	1064	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	139.983871838866	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGTCTGCCTTTTGA	-36995730	True	NA	-21	True	AATAAA	-6	NA	36999342	36949847	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36995424_36995597_36999234
transcript_53158.known	chr13	-	901	9	FSM	ENSG00000120697.10	ENST00000679837.1	901	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	143.743206361205	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTGCAGTCTTCAGTT	-36995728	True	NA	-115	True	AATGAA	-5	NA	36999340	36949941	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36989483_36989577_36993603_36993673_36994988_36995036_36995424_36995597_36999234
transcript_53159.known	chr13	-	919	9	FSM	ENSG00000120697.10	ENST00000680488.1	919	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	142.287506039708	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTCTGCCTTTTGATA	-36995688	True	NA	-19	True	AATAAA	-8	NA	36999300	36949845	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_36950058_36952513_36952600_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995036_36995424_36995597_36999234
transcript_5316.nnic	chr1	-	2299	3	NNC	ENSG00000158195.11	novel	5681	9	NA	NA	-25	-1370	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	295	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTCTTTAGACCCAGAGC	-27490178	False	NA	37	True	NA	NA	NA	27490192	27405599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_27407667_27428908_27428934_27489985
transcript_53160.known	chr13	-	960	8	FSM	ENSG00000120697.10	ENST00000679673.1	960	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	152.634417174248	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTCTTTTGTTTGTTTA	-36995688	True	NA	9	True	TATAAA	-33	NA	36999300	36949737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36999234
transcript_53161.known	chr13	+	1166	11	FSM	ENSG00000120699.14	ENST00000389704.4	1166	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	590.984949046928	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGATTCAGTGCTCT	36986997	True	NA	11	True	ATTAAA	-24	NA	37000785	37009614	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_37000823_37002272_37002310_37002487_37002552_37002933_37003008_37004515_37004562_37005919_37006026_37006114_37006161_37006974_37007072_37008056_37008178_37008728_37008836_37009183
transcript_53162.known	chr13	+	2423	10	FSM	ENSG00000120699.14	ENST00000490537.6	2423	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	777.533628346631	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTCTATTATTTCTTA	36986998	True	NA	26	True	AATAAA	-24	NA	37000786	37009401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_37000823_37002272_37002310_37002487_37002552_37002933_37004562_37005956_37006026_37006114_37006161_37006974_37007072_37008056_37008178_37008728_37008836_37009183
transcript_53163.known	chr13	-	734	9	FSM	ENSG00000102710.21	ENST00000497318.1	734	9	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_4	139.186700154864	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTTGTTTTGTTTTTTA	-37053895	True	NA	NA	False	NA	NA	NA	37059629	37040404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_37040459_37040575_37040693_37044077_37044182_37045246_37045377_37047534_37047602_37047877_37047937_37048563_37048600_37051487_37051584_37059558
transcript_53164.known	chr13	-	1110	10	FSM	ENSG00000120697.10	ENST00000680795.1	1110	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	178.828906437907	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCATTGTCTGCCTTTTG	-36995712	True	NA	-22	True	AATAAA	-5	NA	36999324	36949848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995036_36995426_36995617_36999234
transcript_53165.known	chr13	-	3196	22	FSM	ENSG00000133110.15	ENST00000379743.8	3196	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	1.41100308476467	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAATTAGTGTTTCTTGA	-37598655	True	NA	NA	False	ATTAAA	-10	NA	37598750	37562590	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_37563371_37564518_37564561_37569299_37569384_37569743_37569822_37570579_37570670_37571368_37571459_37577752_37577799_37578843_37578912_37579018_37579122_37579228_37579360_37579860_37579992_37580560_37580698_37582365_37582515_37583968_37584104_37584715_37584929_37586138_37586281_37586781_37586929_37587821_37587987_37590371_37590530_37592099_37592165_37597183_37597283_37598607
transcript_53166.known	chr13	-	7979	11	FSM	ENSG00000133107.15	ENST00000379705.8	7979	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	7.79743547584717	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTAATCTCCTAATGGAC	-37869293	True	NA	NA	False	ATTAAA	-20	NA	37869772	37632062	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_37637626_37639039_37639130_37639257_37639300_37651264_37651460_37655087_37655284_37663415_37663730_37674227_37674368_37691998_37692336_37745936_37746456_37782955_37783361_37869594
transcript_5317.nnic	chr1	-	3077	3	NNC	ENSG00000158195.11	novel	5681	9	NA	NA	-3	-1370	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	203.5	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTCTTTAGACCCAGAGC	-27477726	True	NA	37	True	NA	NA	NA	27490170	27405599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_27408347_27409691_27409898_27490046
transcript_53170.nic	chr13	-	2315	5	ISM	ENSG00000133107.15	ENST00000355779.6	2784	11	-607	37264	-607	-10701	5prime_fragment	FALSE	canonical	3	22	junction_1	5.35607132140714	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCGGATGTCGTATTCATC	-37870200	True	NA	NA	False	AATAAA	-16	NA	37870409	37674128	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_37674368_37691998_37692336_37745936_37746456_37782955_37783361_37869594
transcript_5318.nic	chr1	-	4466	2	ISM	ENSG00000126705.15	ENST00000644989.1	6103	6	52425	-28	2491	0	3prime_fragment	FALSE	canonical	3	46	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTGTCTTGTGAAAGGG	-27551044	False	NA	2	True	AAAAAG	-40	NA	27551054	27534244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_27534917_27547260
transcript_53180.known	chr13	+	3168	6	FSM	ENSG00000120686.12	ENST00000239878.9	3168	6	0	0	0	0	multi-exon	FALSE	canonical	3	838	junction_5	81.2034482026472	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTTGAATTCTGATTTAT	38340601	True	NA	NA	False	ATTAAA	-22	NA	38349850	38363619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_38349922_38349998_38350056_38354238_38354297_38358092_38358133_38359300_38359334_38360710
transcript_53185.known	chr13	+	846	6	FSM	ENSG00000120686.12	ENST00000379649.5	846	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	383.40547726917	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATTCATCTGAGATAAAAA	38340601	True	NA	NA	False	ATTAAA	-17	NA	38349850	38361125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_38349922_38349998_38350228_38354238_38354297_38358092_38358133_38359300_38359334_38360710
transcript_53192.known	chr13	+	777	3	FSM	ENSG00000120686.12	ENST00000494372.1	777	3	0	0	0	0	multi-exon	FALSE	canonical	3	971	junction_1	52	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCGGAGACTTAGGGTTC	38340599	True	NA	NA	False	AAAAAG	-35	NA	38349848	38354885	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_38349922_38349998_38350056_38354238
transcript_53196.known	chr13	-	5182	13	FSM	ENSG00000120685.20	ENST00000352251.8	5182	13	0	0	0	0	multi-exon	FALSE	canonical	3	396	junction_2	37.2028971392761	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGTTTTTTATATATG	-39032526	True	NA	-23	True	CATAAA	-17	NA	39038089	39009864	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_39011488_39012082_39012234_39012690_39014477_39017499_39017545_39022325_39022413_39023051_39023131_39024472_39024557_39026276_39026388_39028226_39028321_39029280_39029376_39031562_39031632_39034130_39034197_39037197
transcript_5320.known	chr1	-	2637	13	FSM	ENSG00000000938.13	ENST00000374005.8	2637	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	2.45373864405591	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCCTTCAATCTGTGTA	NA	False	NA	NA	False	ATTAAA	-20	NA	27635185	27612063	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_27613123_27613218_27613351_27614429_27614584_27614849_27614927_27615433_27615614_27615688_27615845_27616856_27617007_27617192_27617297_27621558_27621658_27623041_27623145_27623690_27623930_27625088_27625152_27635064
transcript_53200.known	chr13	-	5102	12	FSM	ENSG00000120685.20	ENST00000625998.2	5102	12	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_11	126.091925013932	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGTGTTTTTTATATAT	-39032513	True	NA	-24	True	CATAAA	-16	NA	39038076	39009865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_39011488_39012082_39012234_39012690_39014477_39017499_39017545_39022325_39022413_39023051_39023131_39024472_39024557_39026276_39026388_39028226_39028321_39029280_39029376_39031562_39031632_39037197
transcript_53204.nnic	chr13	-	3134	12	NIC	ENSG00000120685.20	novel	5182	13	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	3	52	junction_2	121.338199581525	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTCTGTGTTTTACTA	NA	False	NA	-21	True	AATAAA	-14	NA	39038115	39010152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_39011488_39012082_39012234_39017499_39017545_39022325_39022413_39023051_39023131_39024472_39024557_39026276_39026388_39028226_39028321_39029280_39029376_39031562_39031632_39034130_39034197_39037197
transcript_53205.nnic	chr13	-	2140	12	NIC	ENSG00000120685.20	novel	5182	13	NA	NA	-26	-7	combination_of_known_splicesites	FALSE	canonical	3	52	junction_2	121.338199581525	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAGTGTTTGGAGAC	NA	False	NA	-23	True	AATAAA	-18	NA	39038115	39011146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_39011488_39012082_39012234_39017499_39017545_39022325_39022413_39023051_39023131_39024472_39024557_39026276_39026388_39028226_39028321_39029280_39029376_39031562_39031632_39034130_39034197_39037197
transcript_5321.known	chr1	-	822	5	FSM	ENSG00000126709.16	ENST00000339145.8	822	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	11.1214882097676	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTCCTGCTGTCAATCA	-27671380	True	NA	-3	True	AATAAA	-17	NA	27672178	27666063	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_27666476_27668225_27668376_27668457_27668536_27669220_27669347_27672122
transcript_53212.known	chr13	+	3411	7	FSM	ENSG00000188811.14	ENST00000379600.8	3411	7	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_3	28.008431270284	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCTATAACTTTTTATT	39036955	True	NA	35	True	ATTAAA	-23	NA	39038455	39050109	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_39038724_39039135_39039289_39039563_39039712_39042104_39042306_39044089_39044182_39047039_39047153_39047673
transcript_53213.known	chr13	+	3275	6	FSM	ENSG00000188811.14	ENST00000379599.6	3275	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	42.6680208118446	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCTATAACTTTTTATT	39036890	True	NA	35	True	ATTAAA	-23	NA	39038390	39050109	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_39038724_39039135_39039289_39039563_39039712_39044089_39044182_39047039_39047153_39047673
transcript_53215.nic	chr13	+	2111	5	ISM	ENSG00000188811.14	ENST00000379600.8	3411	7	-140	4819	5	826	5prime_fragment	FALSE	canonical	3	66	junction_3	29.2446576317795	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGGTGACTCATTGTGT	39036815	True	NA	16	True	ATTAAA	-23	NA	39038315	39045290	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_39038724_39039135_39039289_39039563_39039712_39042104_39042306_39044089
transcript_53216.nic	chr13	+	1036	3	ISM	ENSG00000188811.14	ENST00000379599.6	3275	6	-75	10071	5	-1779	5prime_fragment	FALSE	canonical	3	112	junction_1	14.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCAGGCGTGGTGGCGG	39036815	True	NA	NA	False	AATACA	-18	NA	39038315	39040038	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_39038724_39039135_39039289_39039563
transcript_53217.nic	chr13	+	1131	3	ISM	ENSG00000188811.14	ENST00000379599.6	3275	6	4	9897	4	-1605	5prime_fragment	FALSE	canonical	3	112	junction_1	14.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGACAAGGAGCCTGTTAA	39036894	True	NA	NA	False	AAAAAG	-8	NA	39038394	39040212	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_39038724_39039135_39039289_39039563
transcript_53219.known	chr13	-	2132	4	FSM	ENSG00000183722.9	ENST00000379589.4	2132	4	0	0	0	0	multi-exon	TRUE	canonical	1	6	junction_2	11.0252236056942	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGATGAGTCATGGAGTG	-39602938	True	NA	-2	True	AATAAA	-19	NA	39603193	39342891	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_39344055_39378427_39378527_39600831_39601391_39602882
transcript_5322.known	chr1	-	828	5	FSM	ENSG00000126709.16	ENST00000362020.4	828	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	9.65336728815391	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGTCCTGCTGTCAAT	-27671400	True	NA	-5	True	AATAAA	-15	NA	27672198	27666065	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_27666476_27668225_27668376_27668457_27668536_27669232_27669347_27672122
transcript_53221.known	chr13	+	3574	19	FSM	ENSG00000133103.17	ENST00000455146.8	3574	19	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_12	17.6211853415003	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGAGCAGCAATTATTGC	39653425	True	NA	13	True	AATAAA	-14	NA	39655661	39752628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_39655880_39659363_39659508_39660809_39660882_39665095_39665155_39677467_39677580_39679537_39679621_39679974_39680046_39682170_39682265_39687502_39687632_39687707_39687800_39689759_39689825_39694633_39694726_39699500_39699619_39719235_39719368_39719659_39719828_39723332_39723441_39724507_39724562_39727468_39727549_39750945
transcript_5323.known	chr1	+	3579	9	FSM	ENSG00000009780.16	ENST00000373954.11	3579	9	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_5	6.85565460040104	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAATTGTTGGATTTTGT	27725543	True	NA	8	True	AATAAA	-18	NA	27725960	27763116	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27726162_27727471_27727537_27732602_27732658_27734030_27734184_27744653_27744812_27749067_27749155_27755194_27755331_27759525_27759628_27760494
transcript_53230.known	chr13	-	1486	7	FSM	ENSG00000102738.8	ENST00000323563.8	1486	7	0	0	0	0	multi-exon	FALSE	canonical	3	534	junction_3	24.592794789441	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTTCTTTTCACTCGGT	-40765179	True	NA	NA	False	AATACA	-21	NA	40771190	40729127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_40729602_40749137_40749282_40754018_40754093_40756872_40757014_40758947_40759107_40766745_40767034_40770984
transcript_53234.nic	chr13	-	814	4	ISM	ENSG00000102738.8	ENST00000323563.8	1486	7	-21	27746	-21	2128	5prime_fragment	FALSE	canonical	3	540	junction_2	15.1730755689881	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATCAGGCTTTGTAATCT	-40765200	True	NA	NA	False	NA	NA	NA	40771211	40756873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_40757014_40758947_40759107_40766745_40767034_40770984
transcript_53235.nic	chr13	-	366	2	ISM	ENSG00000102738.8	ENST00000323563.8	1486	7	-21	37767	-21	-7893	5prime_fragment	FALSE	canonical	3	570	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTGTTAGGCATTATTAA	-40765200	True	NA	NA	False	NA	NA	NA	40771211	40766894	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_40767034_40770984
transcript_53240.nnic	chr13	+	2786	8	NNC	ENSG00000102743.15	novel	3821	7	NA	NA	-25	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	56.8377569248198	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAGTCTGATGAATTT	NA	False	NA	7	True	ATTAAA	-13	NA	40789386	40812458	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr13_+_40789664_40793157_40793282_40799056_40799316_40805117_40805256_40807293_40807464_40808437_40808597_40809542_40810195_40811451
transcript_53243.known	chr13	+	3821	7	FSM	ENSG00000102743.15	ENST00000338625.9	3821	7	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_6	24.5860168026914	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTCTGATGAATTTCA	40789450	True	NA	9	True	ATTAAA	-15	NA	40789610	40812460	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_40789664_40793157_40793282_40799056_40799316_40805117_40805256_40807293_40807464_40808437_40808597_40809542
transcript_53245.nnic	chr13	+	2616	7	NNC	ENSG00000102743.15	novel	3821	7	NA	NA	-25	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	70.4337750419972	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAGTCTGATGAATTT	NA	False	NA	7	True	ATTAAA	-13	NA	40789386	40812458	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr13_+_40789664_40793157_40793282_40799056_40799316_40805117_40805256_40808437_40808597_40809542_40810195_40811451
transcript_53252.known	chr13	+	2388	10	FSM	ENSG00000120688.9	ENST00000379487.5	2388	10	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_8	23.7133082393478	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAATATTGTTATTCTAA	41057355	True	NA	NA	False	ATTAAA	-19	NA	41061508	41084006	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_41061676_41062643_41062717_41065015_41065079_41065163_41065288_41068560_41068738_41071526_41071574_41072781_41072858_41076043_41076238_41080645_41080810_41082703
transcript_53255.nic	chr13	+	944	8	ISM	ENSG00000120688.9	ENST00000379487.5	2388	10	-22	7768	-22	-7768	5prime_fragment	FALSE	canonical	3	272	junction_4	14.8461497791618	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTTTTTAAATTTTACTC	41057333	True	NA	NA	False	AATAAA	-9	NA	41061486	41076238	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_41061676_41062643_41062717_41065015_41065079_41065163_41065288_41068560_41068738_41071526_41071574_41072781_41072858_41076043
transcript_53256.nic	chr13	+	550	5	ISM	ENSG00000120688.9	ENST00000379487.5	2388	10	-22	15345	-22	-15345	5prime_fragment	FALSE	canonical	3	272	junction_4	15.4979837398289	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCTTCAAAGGGCAGATG	41057333	True	NA	NA	False	AAGAAA	-27	NA	41061486	41068661	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_41061676_41062643_41062717_41065015_41065079_41065163_41065288_41068560
transcript_53258.known	chr13	-	5234	1	FSM	ENSG00000165572.8	ENST00000379485.2	5234	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGCTTCCTGACTTTTT	-41131690	True	NA	-6	True	AATAAA	-14	NA	41132802	41127568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_41127600_41132800
transcript_5327.known	chr1	+	2273	8	FSM	ENSG00000009780.16	ENST00000373949.5	2273	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	9.72268544409918	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGGAA	27725610	True	NA	NA	False	NA	NA	NA	27726027	27761964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27726162_27727471_27727537_27732602_27732658_27734030_27734184_27744653_27744812_27755194_27755331_27759525_27759628_27760494
transcript_53271.known	chr13	-	2184	10	FSM	ENSG00000120662.16	ENST00000379480.9	2184	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_9	25.5623179458638	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTGTTTGACTTCTATT	-41262100	True	NA	-17	True	TATAAA	-25	NA	41263576	41216368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_41217229_41223255_41223355_41226431_41226569_41233889_41234008_41240260_41240434_41252644_41252753_41252948_41253031_41254528_41254621_41260492_41260916_41263484
transcript_53287.known	chr13	-	820	6	FSM	ENSG00000120662.16	ENST00000452359.5	820	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	49.295030175465	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACACCAGCAGATTATGG	-41262071	True	NA	NA	False	TATAAA	-25	NA	41263547	41252663	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_41252753_41252948_41253031_41254528_41254621_41260492_41260916_41262410_41262482_41263484
transcript_53292.known	chr13	+	4285	20	FSM	ENSG00000172766.19	ENST00000379406.8	4285	20	0	0	0	0	multi-exon	TRUE	canonical	3	92	junction_5	10.7654417857376	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATTTATGTTTGTGTTT	41308639	True	NA	14	True	AATAAA	-18	NA	41311266	41377030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_41311583_41316845_41316931_41318805_41318911_41320666_41320825_41323055_41323191_41325697_41325852_41328723_41328844_41331273_41331370_41336649_41336757_41355143_41355217_41358303_41358474_41358809_41358963_41362030_41362160_41367438_41367653_41369089_41369284_41372202_41372312_41372731_41372831_41373636_41373781_41374741_41374840_41375404
transcript_53295.nic	chr13	+	2315	16	NIC	ENSG00000172766.19	novel	2816	15	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_13	27.7965625372795	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCAAAAGAAAAAAAGAGATG	41308597	True	NA	60	True	AAGAAA	-35	NA	41311224	41369204	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_41311583_41316845_41316931_41318805_41318911_41320666_41320825_41323055_41323191_41325697_41325852_41328723_41328844_41331273_41331370_41336649_41336757_41355143_41355217_41358303_41358474_41358809_41358963_41362030_41362160_41362730_41362874_41367438_41367653_41369089
transcript_53298.nic	chr13	+	2172	15	ISM	ENSG00000172766.19	ENST00000379406.8	4285	20	-42	7826	-42	0	5prime_fragment	FALSE	canonical	3	92	junction_5	7.28851486789948	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCAAAAGAAAAAAAGAGATG	41308597	True	NA	60	True	AAGAAA	-35	NA	41311224	41369204	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_41311583_41316845_41316931_41318805_41318911_41320666_41320825_41323055_41323191_41325697_41325852_41328723_41328844_41331273_41331370_41336649_41336757_41355143_41355217_41358303_41358474_41358809_41358963_41362030_41362160_41367438_41367653_41369089
transcript_53299.known	chr13	+	2816	15	FSM	ENSG00000172766.19	ENST00000464857.5	2816	15	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_13	20.638407825	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCAAAAGAAAAAAAGAGATG	41308667	True	NA	60	True	AAGAAA	-35	NA	41311294	41369204	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_41311583_41316845_41316931_41318805_41318911_41320666_41320825_41323055_41323191_41325697_41325852_41328723_41328844_41331273_41331370_41336649_41336757_41355143_41355217_41358303_41358474_41358809_41358963_41362030_41362874_41367438_41367653_41369089
transcript_5330.known	chr1	+	3034	9	FSM	ENSG00000117758.14	ENST00000373943.9	3034	9	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_4	8.09224165481976	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCCTTATCTGTGCCTTG	27771571	True	NA	12	True	AATAAA	-14	NA	27773218	27824443	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27773426_27789561_27789632_27793532_27793633_27801677_27801816_27810245_27810290_27812162_27812269_27817850_27817924_27819649_27819733_27822230
transcript_53302.nic	chr13	+	2052	14	ISM	ENSG00000172766.19	ENST00000379406.8	4285	20	-42	9383	-42	-1557	5prime_fragment	FALSE	canonical	3	92	junction_5	7.53846153846154	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAGGTAACTGAATAGGAA	41308597	True	NA	NA	False	AATAAA	-1	NA	41311224	41367647	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_41311583_41316845_41316931_41318805_41318911_41320666_41320825_41323055_41323191_41325697_41325852_41328723_41328844_41331273_41331370_41336649_41336757_41355143_41355217_41358303_41358474_41358809_41358963_41362030_41362160_41367438
transcript_53312.known	chr13	-	7174	45	FSM	ENSG00000102763.18	ENST00000379310.8	7174	45	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_41	11.8121269454407	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGTACTACCTGGTGAGT	-41959013	True	NA	-10	True	AATAAA	-26	NA	41961109	41566834	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_41568306_41570467_41570707_41575739_41575839_41587511_41587671_41590639_41590766_41605167_41605277_41611575_41611733_41614975_41615085_41670945_41671148_41675214_41675297_41685046_41685243_41689353_41689509_41690165_41690276_41691319_41691446_41691873_41691939_41692861_41692973_41699070_41699271_41701391_41701531_41703302_41703412_41719590_41719743_41721369_41721576_41727193_41727314_41729541_41729678_41732079_41732156_41761127_41761205_41777984_41778057_41783794_41783902_41787436_41787544_41811224_41811341_41816697_41816776_41819217_41819387_41830528_41830643_41833370_41833532_41865735_41865814_41865901_41866037_41868345_41868478_41883386_41883492_41885919_41886029_41886780_41886831_41887196_41887362_41891419_41891588_41907585_41907697_41912037_41912169_41949935_41950014_41960852
transcript_53314.known	chr13	-	3475	26	FSM	ENSG00000102763.18	ENST00000281496.6	3475	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	11.8222840432803	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTCAGTCCTTTTGTTG	-41959024	True	NA	-5	True	AATAAA	-26	NA	41961120	41719336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_41719743_41721369_41721576_41727193_41727314_41729541_41729678_41732079_41732156_41761127_41761205_41777984_41778057_41783794_41783902_41787436_41787544_41811224_41811341_41816697_41816776_41819217_41819387_41830528_41830643_41833370_41833532_41865735_41865814_41865901_41866037_41868345_41868478_41883386_41883492_41885919_41886029_41886780_41886831_41887196_41887362_41891419_41891588_41907585_41907697_41912037_41912169_41949935_41950014_41960852
transcript_53326.nnic	chr13	+	4613	7	NNC	ENSG00000023516.9	novel	9915	13	NA	NA	-680	-20244	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	2.98607881119482	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGACAAAGTAAAAGAAATG	NA	False	NA	23	True	NA	NA	NA	42271471	42303017	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr13_+_42271765_42286299_42286400_42292384_42292502_42295694_42295743_42297047_42297183_42298532_42298798_42299362
transcript_53327.known	chr13	+	9915	13	FSM	ENSG00000023516.9	ENST00000025301.4	9915	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	4.29793231940921	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCTTGGTTTTCATTC	42271683	True	NA	7	True	AATAAA	-12	NA	42272151	42323261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_42272229_42285985_42286036_42286299_42286400_42292384_42292502_42295694_42295743_42297047_42297183_42298532_42298798_42299362_42303864_42308453_42308610_42313046_42313131_42313893_42313941_42317527_42317689_42319087
transcript_53329.known	chr13	+	2201	5	FSM	ENSG00000120659.15	ENST00000398795.7	2201	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	7.11951543294907	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGATTTTGTACTTCAC	42573791	True	NA	13	True	AATAAA	-18	NA	42574151	42608013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_42574523_42581125_42581294_42600751_42600798_42600882_42600982_42606496
transcript_53335.nnic	chr13	+	2888	4	Antisense	novelGene_ENSG00000133106.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_2	2.86744175568088	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTTGTCTGTATCTCTC	42870324	False	NA	5	True	AATAAA	-14	NA	42870527	42907445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr13_+_42870767_42874059_42874128_42897403_42897653_42905113
transcript_53337.known	chr13	+	7459	6	FSM	ENSG00000120675.6	ENST00000379221.4	7459	6	0	0	0	0	multi-exon	FALSE	canonical	3	680	junction_3	61.5922072993005	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACACTCAATTTTTCTGT	43016870	True	NA	NA	False	AATAAA	-22	NA	43023585	43114213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_43023735_43065685_43065738_43068929_43069004_43078611_43078689_43085767_43085839_43107177
transcript_53341.known	chr13	+	924	4	FSM	ENSG00000120675.6	ENST00000474320.1	924	4	0	0	0	0	multi-exon	FALSE	canonical	3	680	junction_3	23.3666428910958	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAACAAAAAAACAGGCAA	43023191	False	NA	NA	False	AAAACA	-9	NA	43023202	43078877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_43023735_43065685_43065738_43068929_43069004_43078611
transcript_53346.known	chr13	+	4028	7	FSM	ENSG00000179630.11	ENST00000325686.7	4028	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	6.21825270205921	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGATTATCTCTGCCAA	43879453	True	NA	7	True	AATAAA	-20	NA	43879903	43893932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_43880120_43880951_43881548_43882184_43882364_43883770_43883937_43888756_43888983_43890113_43890275_43891448
transcript_53361.known	chr13	+	499	4	FSM	ENSG00000227258.7	ENST00000444663.6	706	4	203	4	125	-4	multi-exon	FALSE	canonical	3	12	junction_1	0.942809041582063	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTTTGCAGTTGCCTATT	44142293	False	NA	4	True	NA	NA	NA	44142545	44148030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_44142697_44143556_44143738_44146781_44146856_44147937
transcript_53362.known	chr13	+	2277	4	FSM	ENSG00000227258.7	ENST00000659169.1	2277	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5.65685424949238	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAATTAAAGAAATTGAGAA	44142087	True	NA	NA	False	AATATA	-42	NA	44142339	44240492	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_44142697_44143556_44143738_44146781_44146856_44238827
transcript_53364.known	chr13	+	962	4	FSM	ENSG00000151778.11	ENST00000493476.1	962	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	5.90668171555645	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATACCATGTGTGGGTTA	44373694	True	NA	0	True	AATAAA	-15	NA	44373881	44397710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_44374110_44379640_44379714_44390356_44390579_44397271
transcript_53365.known	chr13	+	802	3	FSM	ENSG00000151778.11	ENST00000379179.8	802	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	4.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCATGTGTGGGTTACAGT	44373636	True	NA	4	True	AATAAA	-19	NA	44373823	44397714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_44374110_44379640_44379714_44397271
transcript_5337.known	chr1	+	1029	7	FSM	ENSG00000117751.18	ENST00000431586.1	1029	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.66826908263056	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCTGATTTGATATTTT	27828957	False	NA	NA	False	AAGAAA	-41	NA	27831323	27850432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27831367_27832755_27832817_27838698_27838853_27841013_27841235_27843185_27843331_27847027_27847093_27850092
transcript_53370.nic	chr13	-	4760	4	NIC	ENSG00000102804.15	novel	5961	3	NA	NA	-171	1045	combination_of_known_junctions	FALSE	canonical	2	19	junction_3	302.560554086102	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTTTTTCATATGACC	-44575891	True	NA	NA	False	AATAAA	-20	NA	44577318	44433521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_44434884_44436043_44436096_44573162_44576247_44577056
transcript_53372.known	chr13	-	3135	3	FSM	ENSG00000102804.15	ENST00000261489.6	3135	3	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_2	163	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTCCTCATTTTAGTAA	-44431647	True	NA	1	True	ATTAAA	-16	NA	44436845	44432142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_44434884_44436043_44436096_44436503
transcript_53373.known	chr13	-	2872	3	FSM	ENSG00000102804.15	ENST00000622051.1	2872	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	350	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTCCTCATTTTAGTAA	NA	False	NA	1	True	ATTAAA	-16	NA	44437254	44432142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_44434884_44436043_44436096_44437175
transcript_53374.known	chr13	-	5961	3	FSM	ENSG00000102804.15	ENST00000458659.3	5961	3	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_2	273	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTCCTCATTTTAGTAA	-44576302	False	104	1	True	ATTAAA	-16	NA	44576330	44432142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_44434884_44436043_44436096_44573162
transcript_53375.known	chr13	-	3480	10	FSM	ENSG00000083635.8	ENST00000379161.5	3480	10	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_8	21.5687244996826	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTGTCTTACTTTGTA	-44986360	True	NA	-4	True	ATTAAA	-15	NA	44989471	44939248	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_44941323_44943441_44943675_44949721_44949839_44959380_44959575_44965843_44965937_44979189_44979267_44979889_44979953_44980721_44980821_44982071_44982155_44989024
transcript_53379.nic	chr13	-	1344	9	ISM	ENSG00000083635.8	ENST00000379161.5	3480	10	-33	4288	-33	-4288	5prime_fragment	FALSE	canonical	3	136	junction_7	22.8770490885516	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTTTGAAAAAACAAACCCT	-44989493	False	NA	NA	False	AAGAAA	-2	NA	44989504	44943536	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_44943675_44949721_44949839_44959380_44959575_44965843_44965937_44979189_44979267_44979889_44979953_44980721_44980821_44982071_44982155_44989024
transcript_5338.known	chr1	+	2340	7	FSM	ENSG00000117751.18	ENST00000311772.10	2340	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_6	6.20259802197613	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAATGAGAGAATGTAGT	27828415	True	NA	17	True	AATAAA	-24	NA	27830781	27851676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27830892_27832755_27832817_27838698_27838853_27841013_27841235_27843185_27843331_27847027_27847093_27850092
transcript_53380.nic	chr13	-	562	2	ISM	ENSG00000083635.8	ENST00000379161.5	3480	10	-33	42824	-33	-42824	5prime_fragment	FALSE	canonical	3	140	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATTTGAAAGATGTTCTT	-44989493	False	NA	18	True	AAAACA	-10	NA	44989504	44982072	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_44982155_44989024
transcript_53388.nnic	chr13	+	3419	10	NNC	ENSG00000133114.18	novel	4294	10	NA	NA	4	-1310	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	39.3938642837927	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGATCTAAGAGTTTTT	44986880	True	NA	NA	False	AAAAAG	-20	NA	44989532	45032292	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr13_+_44989743_45004304_45004438_45006201_45006304_45008794_45008880_45014951_45015084_45015431_45015597_45020329_45020429_45027784_45028004_45029238_45030319_45031098
transcript_53390.nnic	chr13	+	3538	10	NNC	ENSG00000133114.18	novel	4294	10	NA	NA	4	-1310	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	39.3938642837927	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGATCTAAGAGTTTTT	44986880	True	NA	NA	False	AAAAAG	-20	NA	44989532	45032292	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr13_+_44989743_45004304_45004438_45006201_45006304_45008794_45008880_45014951_45015084_45015431_45015597_45020329_45020429_45027784_45028004_45029238_45030431_45031091
transcript_53398.nic	chr13	+	2194	9	ISM	ENSG00000133114.18	ENST00000497558.5	4294	10	-87	3315	4	-18	5prime_fragment	FALSE	canonical	3	35	junction_8	27.0647372054487	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCAATTCTATAAGTTATA	44986880	True	NA	8	True	AATAAA	-1	NA	44989532	45030287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_44989743_45004304_45004438_45006201_45006304_45008794_45008880_45014951_45015084_45015431_45015597_45020329_45020429_45027784_45028004_45029238
transcript_5340.known	chr1	+	2651	7	FSM	ENSG00000117751.18	ENST00000373931.8	2651	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.66826908263056	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATTCTAATGAGAGAATG	27828455	True	NA	13	True	AATAAA	-20	NA	27830821	27851672	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27831247_27832755_27832817_27838698_27838853_27841013_27841235_27843185_27843331_27847027_27847093_27850092
transcript_53402.nic	chr13	+	1516	9	NIC	ENSG00000133114.18	novel	4294	10	NA	NA	4	4	combination_of_known_junctions	FALSE	canonical	2	9	junction_8	34.6365053087057	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGTTGTAGTATTTATT	44986880	True	NA	6	True	AATAAA	-16	NA	44989532	45033606	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_44989743_45004304_45004438_45006201_45006304_45008794_45008880_45014951_45015084_45015431_45015597_45020329_45020429_45027784_45028004_45033235
transcript_53405.known	chr13	+	3410	8	FSM	ENSG00000133114.18	ENST00000361121.6	3410	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	39.4570290677991	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCTTGCAGATTAATC	44986911	True	NA	26	True	AATAAA	-19	NA	44989563	45030305	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_44989743_45004310_45004438_45006201_45006304_45008794_45008880_45014951_45015084_45015431_45015597_45020329_45020429_45027784
transcript_53412.known	chr13	+	3442	8	FSM	ENSG00000133114.18	ENST00000379151.9	3442	8	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_5	15.4774358473283	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCTTGCAGATTAATC	44986885	True	NA	26	True	AATAAA	-19	NA	44989537	45030305	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_44989743_45004304_45004438_45006201_45006304_45008794_45008880_45014951_45015084_45015431_45015597_45020329_45020429_45027784
transcript_53413.known	chr13	+	899	1	FSM	ENSG00000133114.18	ENST00000611650.1	899	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGTCATGCCTTTCTTT	44986876	True	NA	4	True	AATAAA	-21	NA	44989528	44990427	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_44989500_44990400
transcript_53415.known	chr13	+	2228	8	FSM	ENSG00000188342.12	ENST00000340473.8	2228	8	0	0	0	0	multi-exon	FALSE	canonical	3	434	junction_3	50.6045089545449	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCCCATTCCCCACTCC	45116031	True	NA	9	True	AATAAA	-17	NA	45120509	45284893	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_45120722_45136732_45136807_45149769_45149789_45151686_45151832_45207423_45207506_45252870_45252971_45267232_45267377_45283441
transcript_53422.nic	chr13	+	694	7	ISM	ENSG00000188342.12	ENST00000340473.8	2228	8	-38	17637	-38	-77	5prime_fragment	FALSE	canonical	3	434	junction_3	40.4255144954547	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGACGGAAAGCGAGCTCG	45115993	True	NA	22	True	AAAAAG	-4	NA	45120471	45267256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_45120722_45136732_45136807_45149769_45149789_45151686_45151832_45207423_45207506_45252870_45252971_45267232
transcript_53424.nic	chr13	+	737	6	ISM	ENSG00000188342.12	ENST00000340473.8	2228	8	-105	31923	-105	-14363	5prime_fragment	FALSE	canonical	3	434	junction_3	19.3245957266899	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTCTTCTGCTTGTCTC	NA	False	NA	NA	False	AATACA	-3	NA	45120404	45252970	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_45120722_45136732_45136807_45149769_45149789_45151686_45151832_45207423_45207506_45252870
transcript_53429.known	chr13	-	4548	6	FSM	ENSG00000133112.17	ENST00000530705.6	4548	6	0	0	0	0	multi-exon	FALSE	canonical	3	3129	junction_5	544.574843341115	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGCATCCTTAAGGTTAT	-45181082	True	NA	15	True	AATAAA	-30	NA	45341183	45333470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_45337389_45338659_45338777_45339496_45339603_45339993_45340185_45340711_45340786_45341041
transcript_53433.known	chr13	-	1101	5	FSM	ENSG00000133112.17	ENST00000379056.5	1101	5	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_4	1720.98945014198	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAACTTTGTCTCAGCT	-45181111	True	NA	-8	True	AATAAA	-18	NA	45341212	45336872	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_45337389_45338659_45338777_45339496_45339603_45339993_45340185_45341041
transcript_53435.known	chr13	-	1008	5	FSM	ENSG00000133112.17	ENST00000309246.9	1008	5	0	0	0	0	multi-exon	FALSE	canonical	3	3129	junction_4	399.309638626467	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCACTGCACTCTATCCT	-45341057	False	NA	NA	False	NA	NA	NA	45341086	45338184	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_45338777_45339496_45339603_45339993_45340185_45340711_45340786_45341041
transcript_53439.known	chr13	-	764	6	FSM	ENSG00000133112.17	ENST00000379060.8	764	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1587.42054919294	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAATGCATTTAAACTC	-45181021	True	NA	7	True	AAGAAA	-25	NA	45341122	45337197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_45337389_45338659_45338777_45339496_45339603_45339993_45340185_45340711_45340786_45341037
transcript_5344.known	chr1	+	2713	6	FSM	ENSG00000130775.16	ENST00000373921.8	2713	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	14.1336477952438	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATGAGAACGGTATCATT	27870608	True	NA	18	True	AATAAA	-22	NA	27872543	27886675	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27872666_27876587_27876729_27879643_27880055_27881970_27883044_27885294_27885452_27885866
transcript_53441.known	chr13	-	3663	10	FSM	ENSG00000174032.17	ENST00000519676.6	3663	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	6.33820475420074	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTCTGGTTATTTCAGA	-45417617	True	NA	NA	False	AATAAA	-26	NA	45418373	45393315	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_45396016_45397257_45397339_45398939_45399079_45401082_45401208_45402274_45402371_45404326_45404413_45405882_45405978_45408926_45409075_45411361_45411481_45418299
transcript_53445.known	chr13	+	4555	23	FSM	ENSG00000136152.15	ENST00000349995.10	4555	23	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_13	8.6945408919801	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGTCAGACTCACATGC	45462421	True	NA	95	True	ATTAAA	-17	NA	45464938	45536701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_45465211_45476200_45476348_45479004_45479067_45480124_45480291_45481229_45481305_45482380_45482474_45483229_45483356_45486494_45486576_45490914_45490959_45491411_45491539_45492158_45492251_45493346_45493487_45496151_45496313_45503243_45503350_45509691_45509817_45511764_45511855_45516142_45516264_45518761_45518851_45518959_45519095_45524975_45525052_45529790_45529919_45530681_45530781_45534701
transcript_53448.known	chr13	+	531	2	FSM	ENSG00000136152.15	ENST00000617325.1	531	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTCCATGGGGGTCTT	45462380	True	NA	NA	False	NA	NA	NA	45464897	45465658	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_45465211_45465440
transcript_53449.known	chr13	+	255	2	FSM	ENSG00000136152.15	ENST00000476702.1	255	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATTTTCCAGTCTGTTT	45462546	False	NA	NA	False	AATAAA	-14	NA	45465063	45466624	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_45465211_45466516
transcript_53450.nnic	chr13	-	683	4	ISM	ENSG00000123200.17	ENST00000679008.1	8024	19	8	87699	8	-7	5prime_fragment	FALSE	canonical	3	93	junction_3	62.2949971238997	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGATTGAATTTCCCAAA	-46046233	True	NA	NA	False	AATACA	-25	NA	46052738	46042163	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_46042276_46044954_46045065_46045390_46045517_46052403
transcript_53454.nic	chr13	-	3257	14	ISM	ENSG00000123200.17	ENST00000679008.1	8024	19	-21	15195	-8	-7484	5prime_fragment	FALSE	canonical	3	93	junction_13	40.9227877375554	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTCAAAAGAAACCAATTAAG	-46046262	True	NA	NA	False	AAGAAA	-8	NA	46052767	45969659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_45969972_45970361_45970466_45975282_45975839_45979812_45980005_45985296_45985762_45988786_45989098_46003138_46003337_46010347_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045517_46052403
transcript_53466.nic	chr13	-	2630	12	ISM	ENSG00000123200.17	ENST00000679008.1	8024	19	-21	21029	-8	-13318	5prime_fragment	FALSE	canonical	3	93	junction_11	33.9824942780157	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGAGAGAGAGAGGGAG	-46046262	True	NA	6	True	AAAAAG	-16	NA	46052767	45975493	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_45975839_45979812_45980005_45985296_45985762_45988786_45989098_46003138_46003337_46010347_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045517_46052403
transcript_53467.nic	chr13	-	2347	12	ISM	ENSG00000123200.17	ENST00000282007.7	6412	17	-19	13318	-19	-13318	5prime_fragment	FALSE	canonical	3	41	junction_11	46.9221264481185	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGAGAGAGAGAGGGAG	-46046273	True	NA	6	True	AAAAAG	-16	NA	46052778	45975493	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_45975839_45979812_45980005_45985296_45985762_45988786_45989098_46003138_46003337_46010347_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045517_46052697
transcript_53468.nic	chr13	-	2536	12	ISM	ENSG00000123200.17	ENST00000679008.1	8024	19	-21	21123	-8	-13412	5prime_fragment	FALSE	canonical	3	93	junction_11	33.9824942780157	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGATCGTGAAAGGGA	-46046262	True	NA	-3	True	NA	NA	NA	46052767	45975587	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_45975839_45979812_45980005_45985296_45985762_45988786_45989098_46003138_46003337_46010347_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045517_46052403
transcript_53469.nic	chr13	-	2253	12	ISM	ENSG00000123200.17	ENST00000282007.7	6412	17	-19	13412	-19	-13412	5prime_fragment	FALSE	canonical	3	41	junction_11	46.9221264481185	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGATCGTGAAAGGGA	-46046273	True	NA	-3	True	NA	NA	NA	46052778	45975587	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_45975839_45979812_45980005_45985296_45985762_45988786_45989098_46003138_46003337_46010347_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045517_46052697
transcript_53476.nic	chr13	-	1119	7	ISM	ENSG00000123200.17	ENST00000679008.1	8024	19	-21	55883	-8	-198	5prime_fragment	FALSE	canonical	3	93	junction_6	44.2417600614322	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAGTAGGGTGATAAATAG	-46046262	True	NA	NA	False	NA	NA	NA	46052767	46010347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045517_46052403
transcript_53477.nic	chr13	-	836	7	ISM	ENSG00000123200.17	ENST00000282007.7	6412	17	-19	48172	-19	-198	5prime_fragment	FALSE	canonical	3	41	junction_6	61.4129917489415	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAGTAGGGTGATAAATAG	-46046273	True	NA	NA	False	NA	NA	NA	46052778	46010347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045517_46052697
transcript_5348.nic	chr1	+	2300	5	NIC	ENSG00000130775.16	novel	2713	6	NA	NA	0	0	intron_retention	FALSE	canonical	2	3	junction_2	30.9384469552045	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAATGAGAACGGTATCA	27870608	True	NA	16	True	AATAAA	-20	NA	27872543	27886673	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_27872666_27876587_27876729_27881970_27883044_27885294_27885452_27885866
transcript_53487.known	chr13	-	8024	19	FSM	ENSG00000123200.17	ENST00000679008.1	8024	19	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_18	49.0032752747642	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGATCTTTCCATTT	-46046241	True	NA	-8	True	AATAAA	-18	NA	46052746	45954464	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_45957298_45959482_45959647_45963841_45964043_45965279_45965433_45967503_45968029_45968747_45969972_45970361_45970466_45975282_45975839_45979812_45980005_45985296_45985762_45988786_45989098_46003138_46003337_46010347_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045517_46052403
transcript_53488.known	chr13	-	8018	19	FSM	ENSG00000123200.17	ENST00000242848.8	8018	19	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_18	58.6605636556201	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGATCTTTCCATTT	-46046241	True	NA	-8	True	AATAAA	-18	NA	46052746	45954464	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_45957298_45959482_45959647_45963841_45964043_45965279_45965430_45967503_45968029_45968747_45969972_45970361_45970466_45975282_45975839_45979812_45980005_45985296_45985762_45988786_45989098_46003138_46003337_46010347_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045514_46052403
transcript_53491.known	chr13	-	11050	15	FSM	ENSG00000102445.20	ENST00000429979.6	11050	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_13	5.34188302808235	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCAAGCTCCCCTGCCTA	-46386989	True	NA	NA	False	TATAAA	-25	NA	46387252	46334680	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_46343498_46344740_46344832_46345446_46345601_46349285_46349348_46350112_46350352_46356431_46356497_46359485_46359632_46361440_46361574_46362537_46362599_46363114_46363214_46368041_46368250_46368732_46368816_46371940_46372598_46377889_46378006_46387133
transcript_53492.nic	chr13	-	2651	14	NIC	ENSG00000102445.20	novel	11050	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_8	4.58322126454346	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGCTCTGGCTTTTA	-46386989	True	NA	2	True	NA	NA	NA	46387252	46342963	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_46343498_46344740_46344832_46345446_46345601_46349285_46349348_46350112_46350352_46356431_46356497_46359485_46359632_46361440_46361574_46362537_46362599_46363114_46363214_46368041_46368250_46368732_46368816_46371940_46372598_46387133
transcript_53493.known	chr13	-	3206	13	FSM	ENSG00000102445.20	ENST00000378797.6	3206	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	5.46897816984327	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTCATTCTTGCCCAT	NA	False	NA	NA	False	AATAAA	-19	NA	46387500	46341999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_46343498_46344740_46344832_46345446_46345601_46349285_46349348_46350112_46350352_46356431_46356497_46359485_46359632_46361440_46361574_46362537_46362599_46363114_46363214_46368041_46368250_46368732_46368816_46387133
transcript_53495.known	chr13	+	4131	19	FSM	ENSG00000136141.15	ENST00000389798.7	4131	19	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_18	11.1942721243974	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCAAGTTTTTATCAGCC	46551955	True	NA	NA	False	AATAAA	-17	NA	46553199	46743595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_46553704_46650200_46650346_46669029_46669157_46681740_46681847_46685904_46686042_46687851_46687980_46689132_46689197_46692535_46692642_46694892_46695018_46699335_46699404_46701120_46701208_46705067_46705158_46705267_46705305_46711790_46711845_46712524_46712598_46723220_46723331_46728846_46728985_46733920_46733999_46741641
transcript_53497.known	chr13	+	4710	19	FSM	ENSG00000136141.15	ENST00000311191.10	4710	19	0	0	0	0	multi-exon	FALSE	canonical	2	27	junction_9	7.61253028131584	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTTTGTGATTGACTTA	46551923	True	NA	5	True	ATTAAA	-18	NA	46553167	46753040	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_46553704_46650200_46650346_46669029_46669157_46681740_46681847_46685904_46686042_46687851_46687980_46689132_46689197_46692535_46692642_46694892_46695018_46699335_46699404_46701120_46701208_46705067_46705158_46705267_46705305_46711790_46711845_46712524_46712598_46723220_46723331_46728846_46728985_46733920_46733999_46750539
transcript_535.known	chr1	-	3793	24	FSM	ENSG00000131584.19	ENST00000354700.10	3793	24	0	0	0	0	multi-exon	TRUE	canonical	3	64	junction_22	18.152056755675	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGCTCCTGGGCTCCC	-1306642	True	NA	-40	True	AATAAA	-14	NA	1307930	1292390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1293709_1293822_1293934_1294089_1294200_1294401_1294629_1294717_1294817_1295446_1295555_1295735_1295939_1296014_1296110_1296210_1296281_1296424_1296634_1297821_1297934_1298012_1298114_1298369_1298422_1298566_1298680_1299344_1299357_1299830_1299906_1299972_1300069_1300157_1300203_1300508_1300693_1301987_1302047_1302921_1302976_1303161_1303282_1304085_1304144_1307768
transcript_5350.known	chr1	+	1082	4	FSM	ENSG00000130775.16	ENST00000373927.7	1082	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	32.1489588564786	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGAAGACCCTTATGGAG	27870613	True	NA	NA	False	NA	NA	NA	27872548	27886533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27872666_27876587_27876729_27885294_27885452_27885866
transcript_53501.known	chr13	-	1079	11	FSM	ENSG00000139684.15	ENST00000378697.5	1079	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	259.262820319459	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAAACATTGGATTTTAT	-46792901	True	NA	-97	True	TATAAA	-44	NA	46797133	46771334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_46771497_46777455_46777624_46779934_46780034_46781495_46781616_46782666_46782792_46784251_46784351_46787020_46787110_46790596_46790662_46791345_46791421_46793396_46793445_46797104
transcript_53505.known	chr13	-	1121	10	FSM	ENSG00000139684.15	ENST00000378720.8	1121	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	185.410056061932	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTGATTTTAAAAGTTAT	-46792929	True	NA	-18	True	AATAAA	-14	NA	46797161	46771255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_46771497_46777455_46777624_46779934_46780034_46781495_46781616_46782666_46782792_46784251_46784351_46787020_46787110_46791345_46791421_46793396_46793445_46797104
transcript_53507.nic	chr13	-	1216	10	NIC	ENSG00000139684.15	novel	3090	9	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	185.410056061932	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACATGATTTACTCAACT	-46792955	True	NA	-16	True	AATAAA	-37	NA	46797187	46775382	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_46775693_46777455_46777624_46779934_46780034_46781495_46781616_46782666_46782792_46784251_46784351_46787020_46787110_46791345_46791421_46793396_46793445_46797104
transcript_53516.known	chr13	-	2201	12	FSM	ENSG00000136143.16	ENST00000643023.1	2201	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	298.799830727822	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATTTGGGTTCATGGCT	-47991454	True	NA	-19	True	AATAAA	-11	NA	48001305	47942660	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_47943446_47948939_47949029_47949482_47949604_47954139_47954283_47954395_47954558_47965577_47965641_47968594_47968734_47973263_47973393_47988540_47988704_47988881_47988982_47996842_47997024_48001179
transcript_53518.known	chr13	-	2111	11	FSM	ENSG00000136143.16	ENST00000646932.1	2111	11	0	0	0	0	multi-exon	FALSE	canonical	3	694	junction_1	63.9061812346818	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTCATGGCTTTTGT	-47991422	True	NA	-14	True	AATAAA	-16	NA	48001273	47942655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_47943446_47948939_47949029_47949482_47949604_47954139_47954283_47954395_47954558_47968594_47968734_47973263_47973393_47988540_47988704_47988881_47988982_47996842_47997024_48001179
transcript_53519.known	chr13	-	2321	11	FSM	ENSG00000136143.16	ENST00000646804.1	2321	11	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_10	237.469240113325	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAATTTAAGTTAATAAAAA	-48037521	True	NA	7	True	AATAAA	-40	NA	48037942	47942688	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_47943446_47948939_47949029_47949482_47949604_47954139_47954283_47954395_47954558_47968594_47968734_47973263_47973393_47988540_47988704_47988881_47988982_47996842_47997024_48037605
transcript_5352.known	chr1	-	1584	9	FSM	ENSG00000117748.10	ENST00000373912.8	1584	9	0	0	0	0	multi-exon	FALSE	canonical	3	672	junction_5	48.6441157798145	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCGTTTTTCTTTCTGAG	-27909354	True	NA	0	True	AATAAA	-29	NA	27914575	27891523	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_27892248_27894011_27894107_27894289_27894398_27897004_27897122_27897632_27897708_27906927_27907042_27907180_27907283_27914062_27914170_27914433
transcript_53526.known	chr13	-	1445	4	FSM	ENSG00000136143.16	ENST00000470760.2	1445	4	0	0	0	0	multi-exon	FALSE	canonical	3	694	junction_2	53.1057644914582	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTTGCAACTTTTAAT	-47991422	True	NA	NA	False	ATTAAA	-22	NA	48001273	47987633	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_47988704_47988881_47988982_47996842_47997024_48001179
transcript_53528.known	chr13	+	1938	3	FSM	ENSG00000136159.4	ENST00000258662.3	1938	3	0	0	0	0	multi-exon	FALSE	canonical	3	497	junction_2	4.5	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTTTTCATTTCTATAT	48030987	True	NA	19	True	AATAAA	-16	NA	48037725	48047221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_48037905_48040919_48041117_48045659
transcript_5353.known	chr1	-	1162	9	FSM	ENSG00000117748.10	ENST00000373909.7	1162	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_8	235.011036974862	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTACAAATAAGCTTGTTAC	-27914094	False	NA	NA	False	NA	NA	NA	27914746	27891923	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_27892248_27894011_27894107_27894289_27894398_27897004_27897122_27897632_27897708_27906927_27907042_27907180_27907283_27914062_27914170_27914626
transcript_53530.nic	chr13	+	597	2	ISM	ENSG00000136159.4	ENST00000258662.3	1938	3	-226	6110	-226	-6110	5prime_fragment	FALSE	canonical	3	506	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAGTAAGAGAATTATAT	NA	False	NA	NA	False	NA	NA	NA	48037499	48041111	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_48037905_48040919
transcript_53531.nic	chr13	+	930	2	ISM	ENSG00000136159.4	ENST00000258662.3	1938	3	-171	5722	-171	-5722	5prime_fragment	FALSE	canonical	3	506	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCATGTAGTCTGAAGT	48037492	False	NA	5	True	AATAAA	-14	NA	48037554	48041499	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_48037905_48040919
transcript_53537.known	chr13	-	2254	7	FSM	ENSG00000136146.15	ENST00000258648.7	2254	7	0	0	0	0	multi-exon	FALSE	canonical	3	810	junction_6	54.9173621604923	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGTGGTATGTGCCA	-48082294	True	NA	NA	False	NA	NA	NA	48095104	48075723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_48077312_48079843_48079976_48081644_48081732_48083370_48083429_48086281_48086453_48090351_48090419_48094953
transcript_53538.known	chr13	-	931	7	FSM	ENSG00000136146.15	ENST00000378586.5	931	7	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_6	275.662686388032	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCATAGTTTTAGTTTTA	-48082321	True	NA	NA	False	ATTAAA	-35	NA	48095131	48076967	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_48077312_48079843_48079976_48081644_48081732_48083370_48083429_48086281_48086453_48090351_48090419_48095059
transcript_53545.nic	chr13	-	342	3	ISM	ENSG00000136146.15	ENST00000258648.7	2254	7	-51	10656	-24	-9209	5prime_fragment	FALSE	canonical	3	810	junction_2	10.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATCATGAAATGCAAGTT	-48082345	True	NA	-15	True	AATGAA	-24	NA	48095155	48086379	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_48086453_48090351_48090419_48094953
transcript_53546.known	chr13	+	10089	6	FSM	ENSG00000136156.15	ENST00000647800.2	10089	6	0	0	0	0	multi-exon	FALSE	canonical	3	1335	junction_3	80.4596793431344	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGACTTTATTATTTTTG	48214176	True	NA	NA	False	AATAAA	-19	NA	48233205	48270357	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_48233478_48253807_48253937_48256176_48256384_48258125_48258237_48258796_48258948_48261138
transcript_53549.nic	chr13	+	604	3	ISM	ENSG00000136156.15	ENST00000647800.2	10089	6	-96	14074	-93	-2595	5prime_fragment	FALSE	canonical	3	1359	junction_1	30	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAAATCTTTGAAGAAG	NA	False	NA	NA	False	AAGAAA	-2	NA	48233109	48256283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_48233478_48253807_48253937_48256176
transcript_5355.nnic	chr1	-	1547	8	NIC	ENSG00000117748.10	novel	1584	9	NA	NA	-25	0	intron_retention	FALSE	canonical	3	15	junction_4	255.039892837916	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCGTTTTTCTTTCTGAG	-27913961	False	NA	0	True	AATAAA	-29	NA	27914613	27891523	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_27892248_27894011_27894107_27894289_27894398_27897004_27897122_27906927_27907042_27907180_27907283_27914062_27914170_27914433
transcript_53550.known	chr13	+	4768	27	FSM	ENSG00000139687.16	ENST00000267163.6	4768	27	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_4	11.8109491875149	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTGATGTTGTGTTCTT	48302594	True	NA	9	True	AATAAA	-21	NA	48303750	48481890	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_48304050_48307279_48307407_48342598_48342715_48345079_48345200_48347824_48347864_48348955_48349024_48360016_48360128_48362814_48362958_48364893_48364972_48367493_48367604_48368526_48368605_48373404_48373493_48376917_48377035_48379593_48379651_48380052_48380085_48380164_48380242_48381246_48381444_48452992_48453112_48456203_48456350_48459687_48459834_48463730_48463836_48464997_48465112_48465204_48465369_48473359_48473391_48476700_48476844_48477354_48477405_48479997
transcript_53553.known	chr13	-	3075	15	FSM	ENSG00000136161.13	ENST00000344532.8	3075	15	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_13	15.3750725898403	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAATGTGTTGGGGTTTTTT	-48532085	True	NA	NA	False	AATAAA	-24	NA	48533080	48488962	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_48490252_48496190_48496322_48499620_48499761_48501741_48501869_48502723_48502915_48510628_48510772_48511769_48511878_48512015_48512175_48512728_48512896_48515204_48515356_48515585_48515742_48521897_48521963_48522307_48522404_48524658_48524758_48533027
transcript_53558.known	chr13	-	3179	14	FSM	ENSG00000136161.13	ENST00000430805.6	3179	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_11	18.8679622641132	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGAACAAATGTGTTGGG	NA	False	NA	NA	False	AATAAA	-17	NA	48533256	48488969	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_48490252_48496190_48496322_48499620_48499761_48501741_48501869_48502723_48502915_48510628_48510772_48511769_48511878_48512015_48512175_48512728_48512896_48515204_48515356_48515585_48515742_48522307_48522404_48524658_48524758_48533027
transcript_53563.known	chr13	-	2984	12	FSM	ENSG00000136161.13	ENST00000544904.3	2984	12	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_11	9.34021784657551	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGAACAAATGTGTTGGG	NA	False	NA	NA	False	AATAAA	-17	NA	48533256	48488969	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_48490252_48496190_48496322_48499620_48499761_48501741_48501869_48502723_48502915_48510628_48510772_48511769_48511878_48512015_48512175_48512728_48512896_48515204_48515356_48515585_48515742_48533027
transcript_53566.nic	chr13	-	2854	11	NIC	ENSG00000136161.13	novel	3075	15	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_5	18.3425734290475	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAATGTGTTGGGGTTTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	48533262	48488962	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_48490252_48496190_48496322_48499620_48499761_48501741_48501869_48502723_48502915_48511769_48511878_48512015_48512175_48512728_48512896_48515204_48515356_48515585_48515742_48533027
transcript_53569.known	chr13	+	6286	26	FSM	ENSG00000102531.16	ENST00000492622.6	6286	26	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	21.6974099836824	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTTGATTTTGTGCAAC	48974623	True	NA	32	True	AATAAA	-19	NA	48975911	49209779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_48976178_49006151_49006290_49075288_49075365_49114654_49114732_49131136_49131375_49136331_49136602_49138746_49138806_49145777_49145936_49167243_49167304_49168612_49168752_49172042_49172097_49174434_49174560_49175366_49175542_49178567_49178655_49185963_49186103_49187121_49187191_49188514_49188634_49191014_49191121_49191208_49191385_49196876_49196991_49197724_49197875_49197981_49198266_49198361_49198575_49201799_49201967_49203156_49203285_49207080
transcript_53571.known	chr13	+	6328	26	FSM	ENSG00000102531.16	ENST00000541916.5	6328	26	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	25.4971684702439	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGACTTGATTTTGTGCAA	48976341	True	NA	31	True	AATAAA	-18	NA	48976608	49209778	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_48976918_49006151_49006290_49075288_49075365_49114654_49114732_49131136_49131375_49136331_49136602_49138746_49138806_49145777_49145936_49167243_49167304_49168612_49168752_49172042_49172097_49174434_49174560_49175366_49175542_49178567_49178655_49185963_49186103_49187121_49187191_49188514_49188634_49191014_49191121_49191208_49191385_49196876_49196991_49197724_49197875_49197981_49198266_49198361_49198575_49201799_49201967_49203156_49203285_49207080
transcript_53572.known	chr13	+	5714	24	FSM	ENSG00000102531.16	ENST00000398316.7	5714	24	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	23.7759707770138	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACGTTTATTGTATTCAT	49108976	True	NA	16	True	AATAAA	-21	NA	49110312	49209593	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_49110407_49114654_49114732_49131136_49131375_49136331_49136602_49138746_49138806_49145777_49145936_49167243_49167304_49168612_49168752_49172042_49172097_49174434_49174560_49175366_49175542_49178567_49178655_49185963_49186103_49187121_49187191_49188514_49188634_49191014_49191121_49191208_49191385_49196876_49196991_49197724_49197875_49197981_49198266_49198361_49198575_49201799_49201967_49203156_49203285_49207080
transcript_53580.nic	chr13	+	1130	6	ISM	ENSG00000102531.16	ENST00000378383.5	2037	8	-228	10252	-71	-10252	5prime_fragment	FALSE	canonical	3	52	junction_1	23.7520525428856	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAGGTAACTGTTTGAAG	48975786	False	NA	10	True	NA	NA	NA	48975840	49136595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_48976178_49006151_49006290_49075288_49075365_49114654_49114732_49131136_49131375_49136331
transcript_53584.known	chr13	+	6082	26	FSM	ENSG00000102531.16	ENST00000484074.5	6082	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	33.4495201759308	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCATATATATTCATTATT	48976405	False	NA	30	True	AATAAA	-35	NA	48976672	49209607	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_48976918_49006151_49006290_49075288_49075365_49114654_49114732_49131136_49131375_49136331_49136602_49138746_49138806_49145777_49145936_49167243_49167304_49168612_49168752_49172042_49172097_49174434_49174560_49175366_49175542_49178567_49178655_49185963_49186103_49187121_49187191_49188514_49188634_49191014_49191110_49191208_49191385_49196876_49196991_49197724_49197875_49197981_49198266_49198361_49198575_49201799_49201967_49203156_49203285_49207080
transcript_53588.known	chr13	+	3386	10	FSM	ENSG00000102543.14	ENST00000251108.10	3386	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	14.8656535113996	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTAGCCTCAGAAGGTG	49247144	True	NA	3	True	AATAAA	-18	NA	49247924	49293485	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_49248120_49248870_49248966_49255838_49255914_49259345_49259524_49267489_49268060_49274290_49274341_49278349_49278520_49280508_49280699_49286221_49286283_49291683
transcript_53589.known	chr13	+	677	5	FSM	ENSG00000102543.14	ENST00000466868.1	677	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	13.8631706330118	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGGTTTCAAATGAAGA	49247166	True	NA	11	True	AATAAA	-17	NA	49247946	49267785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_49248120_49248870_49248966_49255838_49255914_49259485_49259524_49267489
transcript_53590.known	chr13	-	3502	11	FSM	ENSG00000102547.19	ENST00000409308.6	3502	11	0	0	0	0	multi-exon	TRUE	canonical	2	22	junction_2	2.65518360947035	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGGTTGGTTTCATTC	-49443384	True	NA	-21	True	AATAAA	-13	NA	49444064	49308649	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_49310994_49331946_49332091_49339676_49339743_49344178_49344239_49350743_49350913_49359713_49359833_49376966_49377132_49382799_49382942_49433317_49433394_49434085_49434224_49443985
transcript_53596.nic	chr13	+	3178	14	FSM	ENSG00000136169.17	ENST00000611815.2	6203	14	-137	3162	-137	-3161	multi-exon	FALSE	canonical	3	24	junction_2	12.0167535908791	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTATAAATATGTAACTAA	49444125	False	NA	1	True	AATAAA	-14	NA	49444136	49491841	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_49444858_49451552_49451910_49460106_49460233_49461096_49461163_49467863_49467961_49476475_49477040_49480218_49480336_49480946_49481117_49482736_49482963_49483463_49483564_49485629_49485724_49488289_49488631_49490821_49490911_49491731
transcript_53604.known	chr13	+	1356	10	FSM	ENSG00000136147.18	ENST00000378319.8	1356	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	6.23609564462324	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTACTTGTACCAAATTTG	49495399	True	NA	14	True	AATAAA	-15	NA	49495952	49528976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_49496096_49506634_49506757_49513058_49513167_49518017_49518152_49520893_49520941_49522042_49522108_49523174_49523242_49524084_49524217_49526386_49526459_49528510
transcript_53605.known	chr13	+	903	9	FSM	ENSG00000136147.18	ENST00000426879.5	903	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	15.4712434858999	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGCTCAAAACCAGAGACCA	49495462	False	NA	NA	False	NA	NA	NA	49496015	49528708	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_49496096_49513058_49513167_49518017_49518152_49520893_49520941_49522042_49522108_49523174_49523242_49524084_49524217_49526386_49526459_49528510
transcript_53608.known	chr13	-	4008	13	FSM	ENSG00000136144.12	ENST00000378302.7	4008	13	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_4	9.9173669220548	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATAGAGTTGTTTTTTTC	-49583382	True	NA	NA	False	AATAAA	-21	NA	49585558	49531945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_49534263_49540875_49541007_49541675_49541828_49544736_49544864_49549457_49549649_49551325_49551469_49552177_49552286_49555514_49555674_49559917_49560085_49566617_49566769_49567153_49567321_49580504_49580585_49585443
transcript_53609.nnic	chr13	-	3945	12	NIC	ENSG00000136144.12	novel	4008	13	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	2	19	junction_11	44.9876015977809	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATAGAGTTGTTTTTTTC	-49583399	True	NA	NA	False	AATAAA	-21	NA	49585575	49531945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_49534263_49540875_49541007_49541675_49541828_49544736_49544864_49549457_49549649_49551325_49551469_49552177_49552286_49555514_49555674_49559917_49560085_49566617_49566769_49567153_49567321_49585443
transcript_5361.known	chr1	+	1913	8	FSM	ENSG00000130768.15	ENST00000548116.5	1913	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	78.9719660928575	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTGTTCCTTTTCTTTT	27930078	True	NA	26	True	AAAACA	-25	NA	27935028	27959157	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27935245_27945231_27945446_27948993_27949163_27953214_27953359_27954353_27954527_27955683_27955865_27955948_27956083_27958475
transcript_53610.known	chr13	+	3552	2	FSM	ENSG00000152213.4	ENST00000282026.2	3552	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGAGGCTCATTTCCTTGC	49628454	True	NA	NA	False	NA	NA	NA	49628506	49633872	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_49628616_49630429
transcript_53614.known	chr13	-	977	4	FSM	ENSG00000123179.14	ENST00000242827.11	977	4	0	0	0	0	multi-exon	TRUE	canonical	3	943	junction_3	48.5615302705982	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGCAGTGTTATATTAAT	-49672617	True	NA	-2	True	AGTAAA	-17	NA	49691486	49660673	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_49661209_49663056_49663196_49669776_49669847_49691253
transcript_53616.known	chr13	-	810	3	FSM	ENSG00000123179.14	ENST00000473576.6	810	3	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	466.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTGGCATTAATTGTT	-49672569	True	NA	-10	True	AATAAA	-19	NA	49691438	49660722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_49661209_49663056_49663196_49691253
transcript_53617.known	chr13	-	766	3	FSM	ENSG00000123179.14	ENST00000378272.9	766	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	438	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTGGCATTAATTGTT	-49672594	True	NA	-10	True	AATAAA	-19	NA	49691463	49660722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_49661209_49669776_49669847_49691253
transcript_53619.known	chr13	-	579	2	FSM	ENSG00000123179.14	ENST00000378270.5	579	2	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGTTTTAAGGCGACCAG	-49672588	True	NA	-121	True	NA	NA	NA	49691457	49660833	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_49661209_49691253
transcript_5362.known	chr1	+	1866	8	FSM	ENSG00000130768.15	ENST00000373894.8	1866	8	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_4	17.0281879151444	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTTGTGTTCCTTTT	27930049	True	NA	21	True	AAAACA	-20	NA	27934999	27959152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27935245_27945231_27945446_27949064_27949163_27953214_27953359_27954353_27954527_27955683_27955865_27955948_27956083_27958475
transcript_53623.known	chr13	-	4222	17	FSM	ENSG00000102753.10	ENST00000261667.8	4222	17	0	0	0	0	multi-exon	TRUE	canonical	3	210	junction_1	23.9686481418957	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGAAAACTTATTTCTGA	-49792492	False	NA	-48	True	AATAAA	-27	NA	49792682	49699319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_49701899_49702385_49702481_49705620_49705784_49706097_49706170_49706267_49706373_49709571_49709701_49710890_49711023_49719774_49719820_49721954_49722125_49722476_49722564_49725415_49725502_49732370_49732467_49732604_49732658_49732746_49732777_49732956_49733047_49746948_49746994_49792437
transcript_53629.nic	chr13	-	1222	12	ISM	ENSG00000102753.10	ENST00000261667.8	4222	17	-29	10267	-29	-8377	5prime_fragment	FALSE	canonical	3	223	junction_10	22.0018782068281	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGATAAATAAGGTAAG	-49792478	True	NA	NA	False	NA	NA	NA	49792711	49709586	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_49709701_49710890_49711023_49719774_49719820_49721954_49722125_49722476_49722564_49725415_49725502_49732370_49732467_49732604_49732658_49732746_49732777_49732956_49733047_49746948_49746994_49792437
transcript_53630.known	chr13	-	3057	5	FSM	ENSG00000123178.15	ENST00000361840.8	3057	5	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_3	16.6358047596141	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTTATCTACCTCTTTT	-49934840	True	NA	-7	True	ATTAAA	-24	NA	49936340	49912701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_49915161_49921477_49921581_49927918_49928086_49931017_49931135_49936129
transcript_53633.known	chr13	-	705	6	FSM	ENSG00000231607.14	ENST00000443587.6	1734	6	19	1010	16	209	multi-exon	FALSE	canonical	1	5	junction_4	17.895250766614	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAACCCTTTTAATGAAG	-50081035	True	NA	NA	False	NA	NA	NA	50081972	50044514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_50044769_50049583_50049663_50068096_50068164_50070581_50070642_50075558_50075654_50081822
transcript_53635.known	chr13	-	1737	5	FSM	ENSG00000231607.14	ENST00000458725.7	1806	5	12	57	0	13	multi-exon	FALSE	canonical	3	34	junction_1	5.59016994374947	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTACTGTTTAGGTA	-50081104	True	NA	17	True	ATTAAA	-37	NA	50082041	50043491	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_50044769_50049583_50049663_50068096_50068164_50075558_50075654_50081822
transcript_53641.known	chr13	+	2607	3	FSM	ENSG00000204977.10	ENST00000420995.6	2607	3	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	65	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATATATA	49993520	True	NA	NA	False	NA	NA	NA	49997018	50014331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_49997132_49997666_49997764_50011934
transcript_53643.known	chr13	+	1489	3	FSM	ENSG00000204977.10	ENST00000457662.2	1489	3	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	71	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCAAGTATGCAGTTTT	49993560	True	NA	9	True	TATAAA	-14	NA	49997058	50013168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_49997217_49997666_49997764_50011934
transcript_53647.known	chr13	+	2957	3	FSM	ENSG00000176124.15	ENST00000469754.3	2957	3	0	0	0	0	multi-exon	TRUE	canonical	3	72	junction_2	4.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTTTCTATTTGAAGCA	50080659	True	NA	15	True	AATAAA	-21	NA	50082168	50107218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_50082558_50083141_50083195_50104703
transcript_53649.known	chr13	+	2888	2	FSM	ENSG00000176124.15	ENST00000655550.1	2888	2	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGTTTCACTATTAACT	50080659	True	NA	-1	True	AATAAA	-5	NA	50082168	50107202	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_50082558_50104703
transcript_5365.known	chr1	+	1548	7	FSM	ENSG00000130768.15	ENST00000373888.8	1548	7	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_4	16.2420920929404	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGGCTTCCCACAGTCT	27930088	True	NA	26	True	GATAAA	-23	NA	27935038	27956480	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27935245_27945231_27945446_27949064_27949163_27953214_27953359_27954353_27954527_27955683_27955865_27955948
transcript_53650.known	chr13	-	2092	2	FSM	ENSG00000186047.11	ENST00000400393.3	2092	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAAAAAAAAAAATC	-50843921	False	NA	NA	False	NA	NA	NA	50843939	50711900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_50713241_50843187
transcript_53652.known	chr13	-	1121	2	FSM	ENSG00000186047.11	ENST00000504404.2	1121	2	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGAATGAATGAGATATT	-50843449	True	NA	NA	False	ATTAAA	-22	NA	50843692	50822904	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_50823521_50843187
transcript_53654.known	chr13	+	1513	11	FSM	ENSG00000136104.21	ENST00000336617.8	1513	11	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_10	28.0864736127553	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGTGTATGACTGCTTT	50909063	True	NA	7	True	AATAAA	-17	NA	50909790	50956762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_50910141_50927406_50927479_50929474_50929583_50930682_50930760_50934884_50935000_50943320_50943395_50945426_50945533_50947986_50948069_50949462_50949506_50953904_50953986_50956357
transcript_53657.known	chr13	+	1257	11	FSM	ENSG00000136104.21	ENST00000611510.5	1257	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	131.190129201857	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAATTTCATGTTCTCT	50910121	False	NA	87	True	NA	NA	NA	50910154	50956572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_50910439_50927406_50927479_50929474_50929583_50930682_50930760_50934884_50935000_50943320_50943395_50945426_50945533_50947986_50948069_50949462_50949506_50953904_50953986_50956357
transcript_53658.known	chr13	+	3410	10	FSM	ENSG00000136104.21	ENST00000616907.2	3410	10	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_4	28.1034245090488	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTTTTACATGTTTCA	50908336	True	NA	18	True	AATAAA	-15	NA	50910006	50956503	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_50910141_50927406_50927479_50929474_50929583_50930682_50930760_50934884_50935000_50943320_50943395_50945426_50945533_50947986_50948069_50949462_50949506_50953904
transcript_53659.known	chr13	+	1567	10	FSM	ENSG00000136104.21	ENST00000646731.1	1567	10	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_5	173.700963415169	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATTTGTCCAGTATGTG	50909652	False	NA	3	True	ATTAAA	-17	NA	50909767	50970457	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_50910141_50927406_50927479_50929474_50929583_50930682_50930760_50934884_50935000_50943329_50943395_50945426_50945533_50947986_50948069_50949462_50949506_50969931
transcript_53663.nic	chr13	+	1000	9	ISM	ENSG00000136104.21	ENST00000646279.1	7282	10	37	6810	4	-733	5prime_fragment	FALSE	canonical	3	404	junction_4	29.7381804251706	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAGAAGCTGTGACTAAG	50909089	True	NA	NA	False	NA	NA	NA	50909816	50949504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_50910141_50927406_50927479_50929474_50929583_50930682_50930760_50934884_50935000_50943320_50943395_50945426_50945533_50947986_50948069_50949462
transcript_53672.known	chr13	-	800	5	FSM	ENSG00000226792.8	ENST00000433280.6	800	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	19.2921616207205	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATTTGGTAGAGTTGAAA	-51171566	True	NA	NA	False	NA	NA	NA	51172388	51084080	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_51084326_51085318_51085560_51087927_51088076_51113192_51113223_51172252
transcript_53684.known	chr13	-	826	4	FSM	ENSG00000226792.8	ENST00000569306.1	826	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	22.2311093340441	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGGGTCCCTGAGAAGC	-51172021	False	NA	NA	False	NA	NA	NA	51172222	51084123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_51084326_51085318_51085560_51087927_51088076_51171987
transcript_53685.nnic	chr13	-	2894	4	NIC	ENSG00000226792.8	novel	3075	4	NA	NA	-162	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_3	16.3095064303001	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGTTGACAGATTCTTT	-51172349	False	NA	-4	True	AATAAA	-20	NA	51172550	51082118	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_51084326_51085318_51085560_51087927_51088076_51172252
transcript_53688.nnic	chr13	+	1943	3	Antisense	novelGene_ENSG00000226792.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	22	junction_2	38.5	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTTTCAGGTAGTT	51152780	True	NA	11	True	ATTAAA	-18	NA	51170150	51176074	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr13_+_51170463_51172316_51172419_51174545
transcript_53692.nnic	chr13	+	2574	2	Antisense	novelGene_ENSG00000226792.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	134	junction_1	0	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAGCTTATTGAATCAA	51152780	True	NA	NA	False	AAAAAG	-12	NA	51170150	51178210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr13_+_51170463_51175948
transcript_53694.nnic	chr13	+	1780	2	Antisense	novelGene_ENSG00000226792.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	110	junction_1	0	46	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTTTCAGGTAGTT	51152841	True	NA	11	True	ATTAAA	-18	NA	51170211	51176074	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr13_+_51170463_51174545
transcript_53706.known	chr13	+	2104	5	FSM	ENSG00000150510.17	ENST00000280057.6	2104	5	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_2	110.917762328673	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAATATATTTTTTGAAT	51211681	True	NA	10	True	AATAAA	-18	NA	51222370	51281480	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_51222570_51231347_51231380_51245311_51245420_51251467_51252202_51280449
transcript_53722.known	chr13	+	4728	4	FSM	ENSG00000150510.17	ENST00000322475.13	4728	4	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_3	36.0370180046389	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGAGGTTGTCTCATAAA	51211708	True	NA	17	True	AATAAA	-18	NA	51222397	51284239	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_51222570_51231347_51231380_51251467_51252202_51280449
transcript_53729.known	chr13	+	2383	3	FSM	ENSG00000150510.17	ENST00000615498.4	2383	3	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_1	19	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATATTGTTTATACTAAAA	51211644	True	NA	NA	False	AGTAAA	-18	NA	51222333	51253582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_51222570_51231347_51231380_51251467
transcript_53734.nnic	chr13	+	4283	3	NIC	ENSG00000150510.17	novel	4728	4	NA	NA	-4	-444	combination_of_known_splicesites	TRUE	canonical	2	3	junction_1	99	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTAATGGCCGAGGGCTGG	51211677	True	NA	NA	False	NA	NA	NA	51222366	51283795	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_51222570_51251467_51252202_51280449
transcript_53735.known	chr13	-	3767	20	FSM	ENSG00000102786.15	ENST00000469430.5	3767	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	74.9047779635776	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAGTAATCATTTAAAA	-51452759	False	NA	22	True	AATAAA	-41	NA	51452791	51365198	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_51365846_51367804_51367899_51368938_51369311_51374207_51374440_51374653_51374797_51376047_51376175_51378238_51378455_51379461_51379573_51382028_51382124_51383328_51383462_51383588_51383742_51387385_51387541_51389318_51389445_51395299_51395484_51421111_51421335_51423029_51423091_51430293_51430384_51451024_51451175_51451977_51452056_51452414
transcript_53739.known	chr13	-	7350	18	FSM	ENSG00000102786.15	ENST00000311234.9	7350	18	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_14	17.7301963212959	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCAGAATTATTTTTATG	-51448396	True	NA	-11	True	AATAAA	-18	NA	51453036	51361576	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_51365846_51367804_51367899_51368938_51369311_51374207_51374440_51374653_51374797_51376047_51376175_51378238_51378455_51379461_51379573_51382028_51382124_51383328_51383462_51383588_51383742_51387385_51387541_51389318_51389445_51395299_51395484_51430293_51430384_51451024_51451175_51451977_51452056_51452414
transcript_53746.nic	chr13	-	3011	16	ISM	ENSG00000102786.15	ENST00000311234.9	7350	18	-31	7369	-31	-3210	5prime_fragment	FALSE	canonical	3	170	junction_12	17.8395316331144	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGAAGTATGTATAATAA	NA	False	NA	-5	True	ACTAAA	-32	NA	51453067	51368945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_51369311_51374207_51374440_51374653_51374797_51376047_51376175_51378238_51378455_51379461_51379573_51382028_51382124_51383328_51383462_51383588_51383742_51387385_51387541_51389318_51389445_51395299_51395484_51430293_51430384_51451024_51451175_51451977_51452056_51452414
transcript_53747.nic	chr13	-	2927	16	ISM	ENSG00000102786.15	ENST00000311234.9	7350	18	-31	7453	-31	-3294	5prime_fragment	FALSE	canonical	3	170	junction_12	17.8395316331144	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGAAATTGATGCATTG	NA	False	NA	-89	True	NA	NA	NA	51453067	51369029	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_51369311_51374207_51374440_51374653_51374797_51376047_51376175_51378238_51378455_51379461_51379573_51382028_51382124_51383328_51383462_51383588_51383742_51387385_51387541_51389318_51389445_51395299_51395484_51430293_51430384_51451024_51451175_51451977_51452056_51452414
transcript_53752.nic	chr13	-	3380	5	ISM	ENSG00000102786.15	ENST00000311234.9	7350	18	-31	31498	-31	2224	5prime_fragment	FALSE	canonical	3	170	junction_1	21.7313138121007	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTTGTTTATGTGTGTA	NA	False	NA	NA	False	NA	NA	NA	51453067	51393074	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_51395484_51430293_51430384_51451024_51451175_51451977_51452056_51452414
transcript_53753.known	chr13	-	15428	3	FSM	ENSG00000102786.15	ENST00000442263.4	15428	3	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	6.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACAGTCGTGTAACGGAG	-51448375	True	NA	NA	False	AATAAA	-14	NA	51453015	51436425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_51451175_51451977_51452056_51452414
transcript_53767.known	chr13	+	9369	12	FSM	ENSG00000139668.9	ENST00000298125.7	9369	12	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_5	21.6996781786701	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCGTCCCTTGGTTATGCT	51579324	True	NA	NA	False	ATTAAA	-18	NA	51584461	51767709	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_51584825_51660595_51660664_51675169_51675244_51703595_51703651_51719197_51719349_51727677_51727791_51739048_51739176_51751309_51751416_51755357_51755460_51756331_51756463_51758191_51758301_51759739
transcript_53785.nic	chr13	+	2138	9	NIC	ENSG00000139668.9	novel	9369	12	NA	NA	0	820	combination_of_known_junctions	FALSE	canonical	3	21	junction_8	56.3802658294549	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCAGGCATGGTTGCAG	51579324	True	NA	NA	False	AATACA	-13	NA	51584461	51753943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_51584825_51660595_51660664_51675169_51675244_51703595_51703651_51719197_51719349_51727677_51727791_51739048_51739176_51751309_51751416_51752862
transcript_53786.nic	chr13	+	2344	9	NIC	ENSG00000139668.9	novel	9369	12	NA	NA	-32	987	combination_of_known_junctions	FALSE	canonical	3	21	junction_8	56.3802658294549	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTACTTAATTGATGTACT	51584373	False	NA	NA	False	NA	NA	NA	51584422	51754110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_51584825_51660595_51660664_51675169_51675244_51703595_51703651_51719197_51719349_51727677_51727791_51739048_51739176_51751309_51751416_51752862
transcript_53787.nic	chr13	+	3585	8	ISM	ENSG00000139668.9	ENST00000298125.7	9369	12	0	13766	0	820	5prime_fragment	FALSE	canonical	3	152	junction_5	14.7620583709366	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCAGGCATGGTTGCAG	51579324	True	NA	NA	False	AATACA	-13	NA	51584461	51753943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_51584825_51660595_51660664_51675169_51675244_51703595_51703651_51719197_51719349_51727677_51727791_51739048_51739176_51751309
transcript_53795.known	chr13	-	1199	10	FSM	ENSG00000102796.12	ENST00000682342.1	1199	10	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_7	26.6791637383517	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCTGCAGCAGGTTCTT	-51803099	True	NA	-9	True	AATAAA	-32	NA	51804162	51767994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_51768297_51769155_51769294_51771820_51771912_51773929_51774035_51777059_51777122_51790010_51790093_51791164_51791258_51797825_51797909_51799533_51799668_51804053
transcript_53797.known	chr13	-	1119	9	FSM	ENSG00000102796.12	ENST00000444610.8	1119	9	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_7	26.6739573366983	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGCAGCAGGTTCTTTT	-51803100	True	NA	-7	True	AATAAA	-34	NA	51804163	51767992	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_51768297_51769155_51769294_51771820_51771912_51773929_51774035_51777059_51777122_51790010_51790093_51791164_51791258_51799533_51799668_51804053
transcript_5380.nic	chr1	+	2955	5	NIC	ENSG00000158156.9	novel	2427	6	NA	NA	-74	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	51.0508325103519	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTAGTCTGTGTCATCA	NA	False	NA	14	True	AATAAA	-17	NA	27959513	27968093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_27960363_27963496_27963694_27965350_27965459_27965718_27965929_27966502
transcript_53805.nic	chr13	-	2945	8	NIC	ENSG00000102796.12	novel	1199	10	NA	NA	-24	2	intron_retention	FALSE	canonical	3	21	junction_1	36.698996260533	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAGTACATGCCTCATGA	-51803124	True	NA	-8	True	ATTAAA	-19	NA	51804187	51770781	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_51773034_51773929_51774035_51777059_51777122_51790010_51790093_51791164_51791258_51797825_51797909_51799533_51799668_51804053
transcript_53806.known	chr13	-	1324	8	FSM	ENSG00000102796.12	ENST00000280056.6	1324	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	37.3625371685793	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAATAGTACATGCCTCAT	-51803035	False	NA	-10	True	ATTAAA	-17	NA	51804098	51770783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_51771496_51771820_51771912_51773929_51774035_51777059_51777122_51790010_51790093_51791164_51791258_51799533_51799668_51804053
transcript_53813.known	chr13	+	1793	1	FSM	ENSG00000231856.3	ENST00000618844.1	1793	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTAGTTTCATACAAAGTG	51803728	True	NA	6	True	ATTAAA	-18	NA	51803837	51805630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_51803800_51805600
transcript_53815.known	chr13	-	2414	16	FSM	ENSG00000136098.17	ENST00000618534.4	2414	16	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_15	52.4491711617596	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAATGTGTGCAGTTTTTC	-52156415	True	NA	-9	True	ATTAAA	-19	NA	52159535	52132643	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_52133227_52133688_52133816_52135728_52135864_52136115_52136260_52136799_52136903_52141019_52141070_52143914_52143988_52144690_52144892_52148414_52148470_52151145_52151233_52151324_52151393_52152608_52152693_52153894_52153993_52154079_52154174_52156074_52156249_52159197
transcript_53817.known	chr13	-	2128	16	FSM	ENSG00000136098.17	ENST00000610828.5	2128	16	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_6	38.7013637428393	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTAATGTGTGCAGTTT	-52156477	True	NA	-12	True	ATTAAA	-16	NA	52159597	52132646	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_52133227_52133688_52133816_52135728_52135864_52136115_52136260_52136799_52136903_52141019_52141070_52143914_52143988_52144690_52144892_52148414_52148470_52151145_52151233_52151324_52151393_52152608_52152693_52153894_52153993_52154079_52154174_52156074_52156249_52159542
transcript_5382.known	chr1	+	2243	4	FSM	ENSG00000158156.9	ENST00000675575.1	2243	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	54.9322815433289	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCATGAAATCCTCCAAC	27959085	True	NA	-2	True	AATAAA	-1	NA	27959942	27968077	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27960363_27963496_27963694_27964184_27964236_27966502
transcript_53821.known	chr13	-	2345	15	FSM	ENSG00000136098.17	ENST00000611833.4	2345	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	52.1268077061377	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGTGTGCAGTTTTTCA	NA	False	NA	-8	True	ATTAAA	-20	NA	52159861	52132642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_52133227_52133688_52133816_52135728_52135864_52136115_52136260_52136799_52136903_52143915_52143988_52144690_52144892_52148414_52148470_52151145_52151233_52151324_52151393_52152608_52152693_52153894_52153993_52154079_52154174_52156074_52156249_52159542
transcript_5383.nic	chr1	+	2308	4	NIC	ENSG00000158156.9	novel	2427	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_3	54.485472069779	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACCTAGTCTGTGTCATC	27959092	True	NA	13	True	AATAAA	-16	NA	27959949	27968092	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_27960363_27963496_27963694_27965350_27965459_27966502
transcript_53834.known	chr13	+	6504	5	FSM	ENSG00000253710.5	ENST00000679359.1	6504	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	66.8183170994301	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCATATGCCAATTAAAGAA	52004717	True	NA	-29	True	NA	NA	NA	52012410	52033540	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_52012463_52018912_52019144_52023712_52023780_52024005_52024938_52028318
transcript_53837.known	chr13	+	6454	4	FSM	ENSG00000253710.5	ENST00000681047.1	6454	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	69.8760807906874	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCATATGCCAATTAAAGAA	52004704	True	NA	-29	True	NA	NA	NA	52012397	52033540	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_52012463_52018912_52019148_52024005_52024938_52028318
transcript_53842.known	chr13	+	1004	4	FSM	ENSG00000253710.5	ENST00000650049.2	1004	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	66.6049714527543	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTTTAGAAAACAGACAAAA	52004719	True	NA	68	True	NA	NA	NA	52012412	52028689	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_52012463_52018912_52019144_52024585_52024938_52028318
transcript_53844.known	chr13	+	6556	4	FSM	ENSG00000253710.5	ENST00000680950.1	6556	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	73.1619208787376	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCATATGCCAATTAAAGAA	52004710	True	NA	-29	True	NA	NA	NA	52012403	52033540	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_52012575_52018912_52019144_52024005_52024938_52028318
transcript_53848.known	chr13	+	1520	3	FSM	ENSG00000253710.5	ENST00000681145.1	1520	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	68	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCACAAAGTCGTGAAGAA	52004717	True	NA	NA	False	AGTAAA	-4	NA	52012410	52029554	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_52012463_52018912_52019148_52028321
transcript_5385.known	chr1	+	1578	4	FSM	ENSG00000158156.9	ENST00000675359.1	1578	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	55.3915356550279	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCTTAGCTCCCCTATCC	27959404	False	NA	NA	False	NA	NA	NA	27960261	27967572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27960363_27963496_27963694_27965718_27965929_27966502
transcript_53850.known	chr13	+	6219	3	FSM	ENSG00000253710.5	ENST00000681053.1	6219	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	72	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCATATGCCAATTAAAGAA	52004704	True	NA	-29	True	NA	NA	NA	52012397	52033540	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_52012463_52024005_52024938_52028318
transcript_53855.known	chr13	+	1983	2	FSM	ENSG00000253710.5	ENST00000616513.1	1983	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTTTTGGGTACGTCTTT	52004717	True	NA	9	True	ATTAAA	-14	NA	52012410	52017713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_52012463_52015782
transcript_53857.known	chr13	+	1404	2	FSM	ENSG00000253710.5	ENST00000523764.1	1404	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAATGCCAGAATGATG	52004704	True	NA	NA	False	AAGAAA	-10	NA	52012397	52029657	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_52012463_52028318
transcript_5386.known	chr1	+	2178	3	FSM	ENSG00000158156.9	ENST00000373884.6	2178	3	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	17.5	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTAGTCTGTGTCATCA	27959115	True	NA	14	True	AATAAA	-17	NA	27959972	27968093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27960363_27963496_27963694_27966502
transcript_53861.known	chr13	+	5097	4	FSM	ENSG00000253710.5	ENST00000649340.2	5097	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	75.0125915356141	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCCTGGGCAATAAGCAAA	52004704	True	NA	NA	False	NA	NA	NA	52012397	52032190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_52012463_52018912_52019144_52024005_52024938_52028321
transcript_53862.known	chr13	-	733	2	FSM	ENSG00000136098.17	ENST00000550331.1	733	2	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTAATGTGTGCAGTTTTT	NA	False	NA	-10	True	ATTAAA	-18	NA	52133839	52132644	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_52133227_52133688
transcript_53870.known	chr13	-	4425	14	FSM	ENSG00000136100.14	ENST00000378060.9	4425	14	0	0	0	0	multi-exon	TRUE	canonical	3	139	junction_8	20.2121880156182	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTTTGTGTGAGCAGTT	-52447173	True	NA	-2	True	AATAAA	-24	NA	52450634	52412605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_52415924_52416016_52416094_52417056_52417142_52417991_52418057_52423573_52423640_52425931_52426067_52426988_52427067_52427186_52427220_52433661_52433749_52434792_52434883_52436289_52436405_52439097_52439169_52442376_52442446_52450498
transcript_5388.known	chr1	+	4991	2	FSM	ENSG00000158156.9	ENST00000481387.2	4991	2	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATTAGGTTATGAATAAA	27959075	True	NA	-22	True	NA	NA	NA	27959932	27968057	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_27960363_27963496
transcript_53881.nic	chr13	-	595	6	ISM	ENSG00000136100.14	ENST00000378060.9	4425	14	-47	21076	-47	1156	5prime_fragment	FALSE	canonical	3	168	junction_1	19.4278151113294	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGACAAAAACATTTCTGAG	-52450576	False	NA	NA	False	AAAAAG	-9	NA	52450681	52433681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_52433749_52434792_52434883_52436289_52436405_52439097_52439169_52442376_52442446_52450498
transcript_53882.nic	chr13	-	432	5	ISM	ENSG00000136100.14	ENST00000378060.9	4425	14	4	22232	-2	0	5prime_fragment	FALSE	canonical	3	176	junction_2	17.6688284840846	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGCCAGTTTCCCAGTC	-52447169	True	NA	NA	False	NA	NA	NA	52450630	52434837	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_52434883_52436289_52436405_52439097_52439169_52442376_52442446_52450498
transcript_53883.known	chr13	-	3026	5	FSM	ENSG00000136114.17	ENST00000258613.5	3026	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.58113883008419	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGCTTGGTCTGTCATGT	-52406129	True	NA	NA	False	AATAAA	-16	NA	52406172	52377166	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_52378790_52386027_52386187_52397231_52398195_52402542_52402682_52406030
transcript_53884.known	chr13	-	557	1	FSM	ENSG00000278238.1	ENST00000614364.1	557	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTTGTGTTTGTGTGGTT	-52455224	True	NA	-1	True	GATAAA	-18	NA	52455331	52454774	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_52454800_52455300
transcript_53886.known	chr13	+	3614	9	FSM	ENSG00000136108.15	ENST00000258607.10	3614	9	0	0	0	0	multi-exon	FALSE	canonical	3	522	junction_2	62.6039136156838	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCAGCTTTTTAATATCT	52448065	True	NA	21	True	AATAAA	-18	NA	52455477	52476627	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_52455627_52456522_52456608_52460898_52460975_52461057_52461927_52462362_52462568_52465294_52465466_52468277_52468348_52473828_52474085_52474894
transcript_53889.known	chr13	+	3395	9	FSM	ENSG00000136108.15	ENST00000490903.5	3395	9	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	196.390196738534	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTTAATGAAGTTTATT	52448559	False	NA	10	True	ATTAAA	-15	NA	52455971	52476349	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_52456180_52456522_52456608_52460898_52460975_52461057_52461927_52462362_52462568_52465294_52465466_52468277_52468348_52473828_52474085_52474894
transcript_5389.known	chr1	-	5999	18	FSM	ENSG00000158161.16	ENST00000373871.8	5999	18	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_11	20.6726002569605	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGCTCCTGTGTCTTTTC	-28086142	True	NA	-5	True	AATAAA	-17	NA	28088610	27970343	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_27974547_27978373_27978475_27988534_27988657_27989696_27989812_27993399_27993561_27997319_27997379_27999959_28000050_28004335_28004420_28010946_28011087_28013110_28013295_28017153_28017240_28027788_28027927_28035543_28035681_28038838_28038906_28042570_28042651_28048382_28048427_28057993_28058095_28088523
transcript_53896.known	chr13	+	1972	6	FSM	ENSG00000136108.15	ENST00000378034.7	1972	6	0	0	0	0	multi-exon	FALSE	canonical	3	522	junction_2	48.2012447972041	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGCTCTCTTGGTTTTGT	52448026	True	NA	9	True	ATTAAA	-19	NA	52455438	52465843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_52455627_52456522_52456608_52460898_52460975_52461057_52461927_52462362_52462568_52465294
transcript_53900.known	chr13	+	537	4	FSM	ENSG00000136108.15	ENST00000480747.1	537	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	233.704942181375	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGCATTTCACCTTAAAAA	52455766	True	NA	NA	False	NA	NA	NA	52456007	52461258	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_52456180_52456522_52456608_52460895_52460975_52461057
transcript_5391.known	chr1	-	5885	17	FSM	ENSG00000158161.16	ENST00000540618.5	5885	17	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	14.0734679450376	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTTTGCTCCTGTGTCTT	-28086169	True	NA	-8	True	AATAAA	-14	NA	28088637	27970346	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_27974547_27978373_27978475_27988534_27988657_27989696_27989812_27993399_27993561_27997319_27997379_27999959_28000050_28004335_28004420_28010946_28011087_28013110_28013295_28017153_28017240_28035543_28035681_28038838_28038906_28042570_28042651_28048382_28048427_28057993_28058095_28088523
transcript_53910.known	chr13	+	825	6	FSM	ENSG00000273784.5	ENST00000398039.2	825	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	33.5475781540188	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCCCGAACAGCTGAGGA	52600106	False	NA	NA	False	NA	NA	NA	52600137	52642515	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_52600221_52621988_52622265_52627437_52627579_52632421_52632495_52637304_52637447_52642405
transcript_53912.nic	chr13	+	2262	6	NIC	ENSG00000273784.5	novel	2158	6	NA	NA	-44	23	combination_of_known_junctions	FALSE	canonical	3	14	junction_5	31.2409987036266	2532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTTGGTGGAATCCGTA	52615507	True	NA	5	True	AATAAA	-20	NA	52617480	52643796	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_52617683_52621988_52622265_52627437_52627579_52632421_52632495_52637304_52637447_52642368
transcript_53913.known	chr13	+	2158	6	FSM	ENSG00000273784.5	ENST00000683187.1	2158	6	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_5	21.1660104885167	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATGTCTCTAAAAAAAAA	52615551	True	NA	-18	True	NA	NA	NA	52617524	52643773	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_52617683_52621988_52622265_52627437_52627579_52632421_52632495_52637304_52637447_52642405
transcript_53917.nic	chr13	+	2129	5	NIC	ENSG00000273784.5	novel	2158	6	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_3	38.5835133185147	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATGTCTCTAAAAAAAAA	52615507	True	NA	-18	True	NA	NA	NA	52617480	52643773	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_52617683_52621988_52622265_52627437_52627579_52637304_52637447_52642405
transcript_53922.known	chr13	-	975	1	FSM	ENSG00000273723.1	ENST00000620372.1	975	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTTGTCTTGGTCATAA	-52651973	True	NA	NA	False	AATAAA	-16	NA	52652279	52651304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_52651300_52652300
transcript_53924.known	chr13	+	1217	14	FSM	ENSG00000165416.15	ENST00000343788.10	1217	14	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_5	146.118295271392	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAATGCCCATTGTGTATT	52648439	True	NA	26	True	AATAAA	-33	NA	52652838	52687872	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_52652959_52653045_52653104_52657531_52657623_52658398_52658469_52659178_52659250_52661474_52661571_52662648_52662703_52663095_52663113_52664034_52664058_52665636_52665734_52666811_52666920_52676229_52676321_52679973_52680156_52687733
transcript_53927.nic	chr13	+	1134	13	ISM	ENSG00000165416.15	ENST00000343788.10	1217	14	-156	7817	-26	-7817	5prime_fragment	FALSE	canonical	3	158	junction_5	149.901333290342	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAAAAGTTGGAGGGAG	52651593	True	NA	NA	False	GATAAA	-30	NA	52652682	52680055	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_52652959_52653045_52653104_52657531_52657623_52658398_52658469_52659178_52659250_52661474_52661571_52662648_52662703_52663095_52663113_52664034_52664058_52665636_52665734_52666811_52666920_52676229_52676321_52679973
transcript_53929.known	chr13	+	14161	13	FSM	ENSG00000165416.15	ENST00000310528.9	14161	13	0	0	0	0	multi-exon	FALSE	canonical	3	405	junction_5	52.1111925490953	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGAGTGGGTTAAGTGG	52648436	True	NA	NA	False	AATAAA	-16	NA	52652835	52700909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_52652959_52653045_52653104_52657531_52657623_52658398_52658469_52659178_52659250_52662648_52662703_52663095_52663113_52664034_52664058_52665636_52665734_52666811_52666920_52676229_52676321_52679973_52680156_52687733
transcript_5393.known	chr1	-	1729	17	FSM	ENSG00000158161.16	ENST00000373863.3	1729	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	21.8073955345429	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTGGCATTATTATCTC	-28086096	True	NA	NA	False	AATAAA	-16	NA	28088564	27977272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_27977390_27978373_27978475_27988534_27988657_27989696_27989812_27993399_27993561_27997319_27997379_27999959_28000050_28004335_28004420_28010946_28011087_28013110_28013295_28017153_28017240_28035543_28035681_28038838_28038906_28042570_28042651_28048382_28048427_28057993_28058095_28088523
transcript_53931.nic	chr13	+	1058	12	ISM	ENSG00000165416.15	ENST00000310528.9	14161	13	-173	20854	-46	-7817	5prime_fragment	FALSE	canonical	3	405	junction_5	53.1259224518844	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAAAAGTTGGAGGGAG	52652621	True	NA	NA	False	GATAAA	-30	NA	52652662	52680055	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_52652959_52653045_52653104_52657531_52657623_52658398_52658469_52659178_52659250_52662648_52662703_52663095_52663113_52664034_52664058_52665636_52665734_52666811_52666920_52676229_52676321_52679973
transcript_53933.nnic	chr13	+	1031	12	NNC	ENSG00000165416.15	novel	775	10	NA	NA	310	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	162.959610673147	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAATGCCCATTGTGTATT	52652967	True	NA	26	True	AATAAA	-33	NA	52653148	52687872	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr13_+_52653237_52657531_52657623_52658398_52658469_52659178_52659250_52662648_52662703_52663095_52663113_52664034_52664058_52665636_52665734_52666811_52666920_52676229_52676321_52679973_52680156_52687733
transcript_53938.nic	chr13	+	472	4	ISM	ENSG00000165416.15	ENST00000343788.10	1217	14	-135	29406	-5	-7183	5prime_fragment	FALSE	canonical	3	559	junction_1	12.7104506432917	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTATGCAGTAGCTACTCT	52651614	False	NA	NA	False	NA	NA	NA	52652703	52658466	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_52652959_52653045_52653104_52657531_52657623_52658398
transcript_53941.known	chr13	-	1444	7	FSM	ENSG00000136110.13	ENST00000448904.6	1444	7	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	329.912109507972	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAATTGTACACTTGAGC	-52730507	True	NA	-10	True	AATAAA	-27	NA	52739812	52703263	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_52703808_52708535_52708703_52712715_52712870_52723996_52724111_52733218_52733360_52739030_52739172_52739629
transcript_53945.nnic	chr13	-	1496	6	NIC	ENSG00000136110.13	novel	1455	7	NA	NA	-155	0	combination_of_known_splicesites	FALSE	canonical	3	119	junction_3	374.713437175664	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAATTGTACACTTGAGC	-52739944	False	NA	-10	True	AATAAA	-27	NA	52739975	52703263	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_52703811_52708535_52708703_52712715_52712870_52733218_52733360_52739030_52739172_52739629
transcript_53946.nnic	chr13	-	1421	6	NIC	ENSG00000136110.13	novel	1455	7	NA	NA	-133	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_1	411.738072079811	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAATTGTACACTTGAGC	-52739922	False	NA	-10	True	AATAAA	-27	NA	52739953	52703263	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_52703811_52712715_52712870_52723996_52724111_52733218_52733360_52739030_52739172_52739629
transcript_53954.nic	chr13	-	895	5	ISM	ENSG00000136110.13	ENST00000377962.8	1455	7	-154	9452	-154	0	5prime_fragment	FALSE	canonical	3	845	junction_2	126.83946546718	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACATTTTAAATTATCTT	-52739943	False	NA	0	True	NA	NA	NA	52739974	52712715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_52712870_52723996_52724111_52733218_52733360_52739030_52739172_52739629
transcript_53959.nnic	chr13	-	1057	4	NNC	ENSG00000136110.13	novel	1444	7	NA	NA	-265	-17100	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	515.671945674336	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAAGAATAAACTGATGG	-52740054	False	NA	NA	False	AATAAA	-18	NA	52740085	52729815	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr13_-_52730135_52733218_52733360_52739030_52739172_52739629
transcript_53961.known	chr13	-	3708	3	FSM	ENSG00000136099.13	ENST00000338862.5	3708	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATCTGCCAATTGCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	52848641	52843978	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_52844934_52845424_52845633_52846096
transcript_53987.nnic	chr13	-	2180	5	NNC	ENSG00000234787.8	novel	1020	3	NA	NA	-35	6879	at_least_one_novel_splicesite	FALSE	canonical	3	112	junction_1	1784.09323957578	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTATGGCATAGTTCAC	-54118130	True	NA	-18	True	AATAAA	-15	NA	54132901	54108903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr13_-_54110330_54110894_54111012_54127279_54127430_54130873_54131072_54132612
transcript_5399.nic	chr1	-	1653	15	ISM	ENSG00000158161.16	ENST00000373863.3	1729	17	-80	11200	-7	0	5prime_fragment	FALSE	canonical	3	58	junction_13	12.050277327658	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATTATTTTCTAGCCCCT	-28086176	True	NA	-11	True	AATAAA	-20	NA	28088644	27988472	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_27988657_27989696_27989812_27993399_27993561_27997319_27997379_27999959_28000050_28004335_28004420_28010946_28011087_28013110_28013295_28017153_28017240_28035543_28035681_28038838_28038906_28042570_28042651_28048382_28048427_28057993_28058095_28088523
transcript_53992.nnic	chr13	-	1225	5	NIC	ENSG00000234787.8	novel	1060	5	NA	NA	-91	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	1684.58576139655	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGTGGCCTCTGCTCTGA	-54132939	False	NA	-3	True	CATAAA	-23	NA	54132957	54115782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_54116210_54120939_54121045_54127279_54127430_54130873_54131072_54132612
transcript_54.known	ERCC-00148	+	478	1	FSM	ERCC-00148A	DQ883642	478	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	478	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00148_+_0_500
transcript_54006.nnic	chr13	-	1007	4	NIC	ENSG00000234787.8	novel	1060	5	NA	NA	-71	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	359.511705882669	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGTGGCCTCTGCTCTGA	-54132919	False	NA	-3	True	CATAAA	-23	NA	54132937	54115782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_54116210_54120939_54121045_54127279_54127430_54132612
transcript_54008.nic	chr13	-	1120	4	NIC	ENSG00000234787.8	novel	1060	5	NA	NA	-91	0	combination_of_known_junctions	FALSE	canonical	3	1104	junction_1	1248.13220453604	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGTGGCCTCTGCTCTGA	-54132939	False	NA	-3	True	CATAAA	-23	NA	54132957	54115782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_54116210_54127279_54127430_54130873_54131072_54132612
transcript_5401.known	chr1	-	681	1	FSM	ENSG00000228589.3	ENST00000436160.1	681	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATTCTAAAAGTAGCCCT	-28096394	False	NA	NA	False	AATAAA	-5	NA	28096422	28095741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_28095700_28096400
transcript_54015.nic	chr13	-	989	4	NIC	ENSG00000234787.8	novel	1060	5	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	1104	junction_1	1248.13220453604	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAATCCTGTT	-54118121	True	NA	-69	True	NA	NA	NA	54132892	54115848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_54116210_54127279_54127430_54130873_54131072_54132612
transcript_5402.known	chr1	-	1539	2	FSM	ENSG00000169403.12	ENST00000305392.3	1539	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGTTCTCCCCGATGGGG	-28193781	True	NA	NA	False	TTTAAA	-4	NA	28193873	28149672	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_28151060_28193721
transcript_54024.known	chr13	-	1030	4	FSM	ENSG00000234787.8	ENST00000427299.6	1030	4	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_1	1612.78826880654	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCAGGTTCTCTTTG	-54118091	True	NA	0	True	ATTAAA	-18	NA	54132862	54124323	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_54124756_54127279_54127430_54130873_54131072_54132612
transcript_54028.known	chr13	-	833	4	FSM	ENSG00000234787.8	ENST00000606706.5	833	4	0	0	0	0	multi-exon	FALSE	canonical	3	758	junction_1	1410.41042096106	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTAGGTTTGTTTATAC	-54118048	True	NA	NA	False	NA	NA	NA	54132819	54124994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_54125273_54127279_54127430_54130873_54131072_54132612
transcript_54031.nic	chr13	-	848	3	NIC	ENSG00000234787.8	novel	1060	5	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	587	junction_2	258.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGTGGCCTCTGCTCTGA	-54118112	True	NA	-3	True	CATAAA	-23	NA	54132883	54115782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_54116210_54127279_54127430_54132612
transcript_54035.known	chr13	-	849	3	FSM	ENSG00000234787.8	ENST00000607494.5	849	3	0	0	0	0	multi-exon	FALSE	canonical	3	587	junction_2	85.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTCTCTAAACCTTATTC	-54118080	True	NA	NA	False	ACTAAA	-19	NA	54132851	54124812	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_54125273_54127279_54127430_54132612
transcript_54037.known	chr13	-	1020	3	FSM	ENSG00000234787.8	ENST00000451744.1	1020	3	0	0	0	0	multi-exon	FALSE	canonical	3	3573	junction_2	163.5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGGTGTTTTAGAGTT	-54118095	True	NA	NA	False	AATAAA	-26	NA	54132866	54126861	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_54127430_54130873_54131072_54132612
transcript_5405.known	chr1	-	1600	10	FSM	ENSG00000126698.11	ENST00000489277.5	1600	10	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_8	1019.781797043	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATTGATGTACTTTTC	-28209836	True	NA	23	True	AATAAA	-12	NA	28233025	28200558	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_28201371_28203746_28203823_28205257_28205350_28208341_28208414_28209971_28210067_28210570_28210638_28214939_28214997_28228921_28229024_28230130_28230253_28232920
transcript_5406.known	chr1	-	1763	9	FSM	ENSG00000126698.11	ENST00000263697.6	1763	9	0	0	0	0	multi-exon	FALSE	canonical	3	2188	junction_2	233.390465475777	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTCCAGCTCACAGTCTAT	-28209840	True	NA	NA	False	ATTAAA	-18	NA	28233029	28200277	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_28201371_28203746_28203823_28205257_28205350_28208341_28208414_28209971_28210067_28210570_28210638_28214939_28214997_28228921_28229024_28232920
transcript_54062.nnic	chr13	+	1511	3	Antisense	novelGene_ENSG00000283126.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	48	junction_1	20.5	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTGTATAGTTCAAACG	54267334	True	NA	10	True	AATAAA	-25	NA	54268485	54353580	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr13_+_54269408_54335030_54335144_54353104
transcript_54065.nnic	chr13	+	1229	3	Antisense	novelGene_ENSG00000283126.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	51	junction_2	14	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCTTCTGGGTGACTGTT	54267438	False	NA	8	True	CATAAA	-18	NA	54268589	54342275	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr13_+_54269408_54335042_54335144_54341965
transcript_54067.nnic	chr13	+	1499	3	Antisense	novelGene_ENSG00000283126.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	79	junction_1	5	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTGTATAGTTCAAACG	54267334	True	NA	10	True	AATAAA	-25	NA	54268485	54353580	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr13_+_54269408_54335042_54335144_54353104
transcript_54072.nnic	chr13	+	832	2	Antisense	novelGene_ENSG00000283126.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	67	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTGTATAGTTCAAACG	54268991	False	NA	10	True	AATAAA	-25	NA	54269051	54353580	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr13_+_54269408_54353104
transcript_54086.nnic	chr13	-	3717	4	NNC	ENSG00000274090.1	novel	809	3	NA	NA	-231	2575	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_2	71.1867653117878	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACACACACACATTTCCTAA	-55583706	False	NA	25	True	AATAAA	-44	NA	55583755	55533121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr13_-_55536347_55554860_55554985_55581427_55581530_55583489
transcript_54090.known	chr13	-	809	3	FSM	ENSG00000274090.1	ENST00000617598.1	809	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	19.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCATTATTTCAACTAATA	-55583475	False	NA	NA	False	NA	NA	NA	55583524	55535696	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_55536347_55554860_55554985_55583489
transcript_54098.nnic	chr13	-	1213	3	NNC	ENSG00000274090.1	novel	809	3	NA	NA	-231	-18443	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_1	76	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTCTTTTTTTTTTTTTC	-55583706	False	NA	2	True	ATTAAA	-22	NA	55583755	55554139	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr13_-_55554985_55581427_55581530_55583489
transcript_5410.nic	chr1	-	615	7	ISM	ENSG00000126698.11	ENST00000263697.6	1763	9	-21	4980	-21	0	5prime_fragment	FALSE	canonical	3	2378	junction_3	199.080734600033	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACATATCAGTATATTCAT	-28209861	True	NA	-2	True	ATTAAA	-36	NA	28233050	28205257	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_28205350_28208341_28208414_28209971_28210067_28210570_28210638_28214939_28214997_28228921_28229024_28232920
transcript_54100.nnic	chr13	-	711	3	NNC	ENSG00000274090.1	novel	809	3	NA	NA	-231	-42567	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	114	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-55583706	False	NA	NA	False	ATTAAA	-21	NA	55583755	55578263	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr13_-_55578620_55581440_55581530_55583489
transcript_54104.nnic	chr13	+	2656	2	Antisense	novelGene_ENSG00000274090.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGGAGATAGGGGTGGGG	NA	False	NA	NA	False	NA	NA	NA	55578263	55583740	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr13_+_55578620_55581440
transcript_54107.known	chr13	-	4745	28	FSM	ENSG00000139734.19	ENST00000400324.9	4745	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	29.3484809374068	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTCTTTTGTCTCTCTT	-60159077	True	NA	NA	False	AATAAA	-29	NA	60163928	59665582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_59666847_59774188_59774249_59774727_59774824_59810787_59810924_59833106_59833272_59839323_59839449_59861406_59861537_59879228_59879469_59911734_59911837_59916154_59916250_59924774_59924871_59969943_59970059_59970851_59971161_59974351_59974457_59980794_59980860_59983768_59983888_59991157_59991275_59992067_59992187_59992472_59992584_60008543_60008650_60010532_60010670_60015912_60015983_60016070_60016146_60042689_60042821_60093627_60093733_60112009_60112187_60132956_60132990_60163586
transcript_54108.known	chr13	-	3549	27	FSM	ENSG00000139734.19	ENST00000377908.6	3549	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	35.1536988719352	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAAACTGGTTTTTAAAAA	-60163750	False	NA	NA	False	NA	NA	NA	60163766	59666583	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_59666847_59774188_59774249_59774727_59774824_59810787_59810924_59833106_59833272_59839323_59839449_59861406_59861537_59879228_59879469_59911734_59911837_59916154_59916250_59924774_59924871_59969943_59970059_59970851_59971161_59974351_59974457_59980794_59980860_59983768_59983888_59991157_59991275_59992067_59992187_59992472_59992584_60008543_60008650_60010532_60010670_60015912_60015983_60016070_60016146_60042689_60042821_60093627_60093733_60112009_60112187_60163586
transcript_54110.known	chr13	-	3372	26	FSM	ENSG00000139734.19	ENST00000400319.5	3372	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	39.6777015463346	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAAACTGGTTTTTAAAAA	-60163750	False	NA	NA	False	NA	NA	NA	60163766	59666583	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_59666847_59774188_59774249_59774727_59774824_59810787_59810924_59833106_59833272_59839323_59839449_59861406_59861537_59879228_59879469_59911734_59911837_59916154_59916250_59924774_59924871_59969943_59970059_59970851_59971161_59974351_59974457_59980794_59980860_59983768_59983888_59991157_59991275_59992067_59992187_59992472_59992584_60008543_60008650_60010532_60010670_60015912_60015983_60016070_60016146_60042689_60042821_60093627_60093733_60163586
transcript_54113.nic	chr13	-	3273	25	ISM	ENSG00000139734.19	ENST00000267215.8	3449	27	-218	36837	-56	26779	5prime_fragment	FALSE	canonical	0	0	junction_2	30.9609689322253	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAGCAGAGGAAAAAGAA	-60163968	True	NA	-3	True	AATAAA	-18	NA	60163984	59810895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_59810924_59833106_59833272_59839323_59839449_59861406_59861537_59879228_59879469_59911734_59911837_59916154_59916250_59924774_59924871_59969943_59970059_59970851_59971161_59974351_59974457_59980794_59980860_59983768_59983888_59991157_59991275_59992067_59992187_59992472_59992584_60008543_60008650_60010532_60010670_60015912_60015983_60016070_60016146_60042689_60042821_60093627_60093733_60112009_60112187_60132956_60132990_60163586
transcript_54120.nic	chr13	-	2343	18	ISM	ENSG00000139734.19	ENST00000267215.8	3449	27	-218	150761	-56	-63566	5prime_fragment	FALSE	canonical	3	109	junction_1	14.3160084131651	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGAACTTAAGTTTTTA	-60163968	True	NA	NA	False	AAGAAA	-17	NA	60163984	59924819	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_59924871_59969943_59970059_59970851_59971161_59974351_59974457_59980794_59980860_59983768_59983888_59991157_59991275_59992067_59992187_59992472_59992584_60008543_60008650_60010532_60010670_60015912_60015983_60016070_60016146_60042689_60042821_60093627_60093733_60112009_60112187_60132956_60132990_60163586
transcript_54123.nic	chr13	-	2291	17	ISM	ENSG00000139734.19	ENST00000267215.8	3449	27	-218	195886	-56	-108691	5prime_fragment	FALSE	canonical	3	110	junction_14	13.4669734907291	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAGTTTAACATCTTGAT	-60163968	True	NA	NA	False	AATACA	-19	NA	60163984	59969944	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_59970059_59970851_59971161_59974351_59974457_59980794_59980860_59983768_59983888_59991157_59991275_59992067_59992187_59992472_59992584_60008543_60008650_60010532_60010670_60015912_60015983_60016070_60016146_60042689_60042821_60093627_60093733_60112009_60112187_60132956_60132990_60163586
transcript_54126.nic	chr13	-	2132	16	ISM	ENSG00000139734.19	ENST00000267215.8	3449	27	-218	196838	-56	-109643	5prime_fragment	FALSE	canonical	3	110	junction_13	13.5885572776836	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTTAAACCTGAAATCAG	-60163968	True	NA	NA	False	AAGAAA	-1	NA	60163984	59970896	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_59971161_59974351_59974457_59980794_59980860_59983768_59983888_59991157_59991275_59992067_59992187_59992472_59992584_60008543_60008650_60010532_60010670_60015912_60015983_60016070_60016146_60042689_60042821_60093627_60093733_60112009_60112187_60132956_60132990_60163586
transcript_5413.nic	chr1	-	453	5	ISM	ENSG00000126698.11	ENST00000263697.6	1763	9	-21	9692	-21	190	5prime_fragment	FALSE	canonical	3	2378	junction_1	78.9255978754675	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATTTATAGTGCTGCTG	-28209861	True	NA	0	True	NA	NA	NA	28233050	28209969	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_28210067_28210570_28210638_28214939_28214997_28228921_28229024_28232920
transcript_54133.nic	chr13	-	919	6	ISM	ENSG00000139734.19	ENST00000267215.8	3449	27	-218	242012	-56	-154817	5prime_fragment	FALSE	canonical	3	110	junction_3	10.2097992144802	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTATTGCTAATAATTA	-60163968	True	NA	NA	False	NA	NA	NA	60163984	60016070	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_60016146_60042689_60042821_60093627_60093733_60112009_60112187_60132956_60132990_60163586
transcript_54137.nic	chr13	-	678	4	ISM	ENSG00000139734.19	ENST00000267215.8	3449	27	-218	319604	-56	-232409	5prime_fragment	FALSE	canonical	3	110	junction_1	8.52447456836295	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGATGCAGTACATTAAT	-60163968	True	NA	NA	False	GATAAA	-44	NA	60163984	60093662	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_60093733_60112009_60112187_60132956_60132990_60163586
transcript_5414.nnic	chr1	-	1052	4	NNC	ENSG00000126698.11	novel	1600	10	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_3	1032.20379124796	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATTGATGTACTTTTC	-28209846	True	NA	23	True	AATAAA	-12	NA	28233035	28200558	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_28201371_28203746_28203823_28205257_28205307_28232920
transcript_54140.nic	chr13	+	2906	14	NIC	ENSG00000083544.16	novel	2645	14	NA	NA	22	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_8	7.88827307279647	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTTTACTGTGTGTTTT	60396950	False	NA	19	True	AATAAA	-15	NA	60396960	60573870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_60397406_60439687_60439773_60444682_60444749_60460379_60460541_60467237_60467380_60483774_60483847_60485798_60485949_60494434_60494576_60509762_60509920_60510629_60510756_60528366_60529218_60535107_60535234_60567524_60567651_60573612
transcript_54141.known	chr13	+	2645	14	FSM	ENSG00000083544.16	ENST00000377881.8	2645	14	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_8	7.94209815331711	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTACTGTGTGTTTTA	60396636	True	NA	20	True	AATAAA	-16	NA	60397219	60573871	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_60397406_60439687_60439773_60444682_60444749_60460379_60460541_60467237_60467380_60483774_60483847_60485798_60485949_60494434_60494576_60509762_60509920_60510629_60510756_60528366_60529218_60535107_60535234_60567524_60567651_60573615
transcript_54142.nic	chr13	+	2016	11	ISM	ENSG00000083544.16	ENST00000377881.8	2645	14	-259	45034	22	0	5prime_fragment	FALSE	canonical	3	36	junction_8	7.49933330370107	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAACATCTATTCCTGAT	60396950	False	NA	NA	False	AAAAAG	-6	NA	60396960	60528837	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_60397406_60439687_60439773_60444682_60444749_60460379_60460541_60467237_60467380_60483774_60483847_60485798_60485949_60494434_60494576_60509762_60509920_60510629_60510756_60528366
transcript_54145.known	chr13	-	28227	2	FSM	ENSG00000184226.15	ENST00000377861.4	28227	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTGAGACTTTGTGTT	NA	False	NA	NA	False	AATAAA	-21	NA	67230445	67201014	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_67228576_67229779
transcript_54148.known	chr13	-	2231	3	FSM	ENSG00000204899.6	ENST00000377818.4	2231	3	0	0	0	0	multi-exon	FALSE	canonical	3	648	junction_1	22.5	254	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCCTGTACTTTTGTTTT	-72719985	True	NA	-10	True	AATAAA	-16	NA	72727629	72708366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_72710346_72718951_72719098_72727523
transcript_54154.known	chr13	-	3651	23	FSM	ENSG00000083520.15	ENST00000545453.5	3651	23	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	76.3876044636987	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTAGTTATATCAGTG	NA	False	NA	0	True	AATAAA	-24	NA	72782096	72759043	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_72759164_72759472_72759879_72760528_72760652_72761362_72761522_72761645_72761815_72761922_72762138_72763450_72763608_72765971_72766059_72768784_72768913_72770903_72770989_72771080_72771146_72771794_72771897_72772158_72772276_72772692_72772840_72773683_72773822_72773945_72774060_72775210_72775376_72775924_72776093_72777419_72777494_72778186_72778381_72780845_72781004_72781288_72781357_72781604
transcript_54156.known	chr13	-	10571	21	FSM	ENSG00000083520.15	ENST00000377767.9	10571	21	0	0	0	0	multi-exon	FALSE	canonical	2	127	junction_16	33.1995481896968	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGTTCTAATTGCAAACT	-72776307	True	NA	-4	True	AATAAA	-17	NA	72781900	72752168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_72759879_72760528_72760652_72761362_72761522_72761645_72761815_72761922_72762138_72763450_72763608_72765971_72766059_72768784_72768913_72770903_72770989_72771080_72771146_72771794_72771897_72772158_72772276_72772692_72772840_72773683_72773822_72773945_72774060_72775210_72775376_72775924_72776093_72777419_72777494_72778186_72778381_72780845_72781004_72781604
transcript_54157.known	chr13	-	5232	21	FSM	ENSG00000083520.15	ENST00000377780.8	5232	21	0	0	0	0	multi-exon	FALSE	canonical	2	41	junction_19	61.5454913052126	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	-72776332	True	NA	NA	False	NA	NA	NA	72781925	72757442	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_72759879_72760528_72760652_72761362_72761522_72761645_72761815_72761922_72762138_72763450_72763608_72765971_72766059_72768784_72768913_72770903_72770989_72771080_72771146_72771794_72771897_72772158_72772276_72772692_72772840_72773683_72773822_72773945_72774060_72775210_72775376_72775924_72776093_72777419_72777494_72778186_72778381_72781288_72781357_72781604
transcript_54166.nic	chr13	-	2303	16	ISM	ENSG00000083520.15	ENST00000377767.9	10571	21	-203	11377	-7	-3871	5prime_fragment	FALSE	canonical	2	127	junction_11	31.9524646936664	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATGAGGAATTTTCTGAA	NA	False	NA	NA	False	NA	NA	NA	72782103	72763545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_72763608_72765971_72766059_72768784_72768913_72770903_72770989_72771080_72771146_72771794_72771897_72772158_72772276_72772692_72772840_72773683_72773822_72773945_72774060_72775210_72775376_72775924_72776093_72777419_72777494_72778186_72778381_72780845_72781004_72781604
transcript_5417.known	chr1	+	503	3	FSM	ENSG00000130770.18	ENST00000335514.10	503	3	0	0	0	0	multi-exon	FALSE	canonical	3	3943	junction_2	212	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTTGATGCCTTCTTC	28179949	True	NA	13	True	AATAAA	-15	NA	28236123	28238100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28236271_28236360_28236453_28237836
transcript_54171.known	chr13	+	2760	12	FSM	ENSG00000136122.18	ENST00000390667.11	2760	12	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	14.2411346933934	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCATTTTCTTCTTTCC	72726149	True	NA	NA	False	AATAAA	-16	NA	72727922	72756196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_72728008_72728925_72729094_72731280_72731388_72734959_72735006_72737961_72738044_72743536_72743603_72744504_72744562_72744980_72745208_72745943_72746077_72746500_72747112_72753689_72753822_72755150
transcript_54175.known	chr13	+	1673	11	FSM	ENSG00000136122.18	ENST00000651376.1	1673	11	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_2	32.552112066654	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCCTCTGTCAGAATCAA	72726149	True	NA	NA	False	AAAACA	-31	NA	72727922	72755216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_72728008_72728925_72729094_72734959_72735006_72737961_72738044_72743536_72743603_72744504_72744562_72744980_72745208_72745943_72746077_72746500_72747112_72753689_72753822_72755150
transcript_5418.known	chr1	+	1855	2	FSM	ENSG00000130770.18	ENST00000465645.1	1855	2	0	0	0	0	multi-exon	FALSE	canonical	3	4367	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTTTGATGCCTTCT	28179979	True	NA	11	True	AATAAA	-13	NA	28236153	28238098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28236271_28236360
transcript_54186.known	chr13	+	567	7	FSM	ENSG00000136122.18	ENST00000471712.5	567	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	39.8789836045671	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGAAAGCTGTTTTTAGA	72726151	True	NA	NA	False	NA	NA	NA	72727924	72745045	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_72728008_72728925_72729094_72734959_72735006_72737961_72738044_72743536_72743603_72744504_72744562_72744980
transcript_54190.nic	chr13	-	814	3	ISM	ENSG00000083520.15	ENST00000490646.1	2934	20	-249	18549	-7	2622	5prime_fragment	FALSE	canonical	3	170	junction_2	21.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAAGCCATAGAAGAAGG	NA	False	NA	NA	False	NA	NA	NA	72782103	72778223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_72778381_72780845_72781004_72781604
transcript_54193.known	chr13	+	3080	18	FSM	ENSG00000083535.16	ENST00000326291.11	3080	18	0	0	0	0	multi-exon	TRUE	canonical	1	20	junction_8	16.5169515523088	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGGAAAGTCTGTTGC	72779525	True	NA	NA	False	AATAAA	-41	NA	72782132	73016461	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_72782350_72783422_72783722_72792446_72792548_72795358_72795558_72797906_72798027_72821848_72821983_72827009_72827119_72827732_72827915_72835242_72835369_72854056_72854156_72893783_72893950_72908530_72908682_72917075_72917167_72931164_72931268_72965273_72965405_72973590_72973676_72998821_72998996_73015868
transcript_54201.known	chr13	+	3349	4	FSM	ENSG00000102554.14	ENST00000377687.6	3349	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	1.63299316185545	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTGGTGCTTTTCTTC	73058539	True	NA	14	True	AATAAA	-15	NA	73059004	73077538	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_73059589_73061860_73062735_73063823_73063884_73075707
transcript_54209.known	chr13	-	6182	19	FSM	ENSG00000136111.14	ENST00000377625.6	6182	19	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_18	16.2989055150232	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTTACTTTTCGGGAG	-75481820	False	NA	0	True	AATAAA	-26	NA	75482114	75284664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_75287026_75288933_75289111_75292101_75292272_75294853_75295014_75299329_75299575_75302242_75302402_75306312_75306472_75309941_75310152_75312737_75312899_75326196_75326424_75327751_75327827_75336920_75337041_75341124_75341236_75341495_75341588_75349169_75349303_75356146_75356252_75359768_75359859_75362025_75362608_75481269
transcript_54212.nic	chr13	-	3054	12	ISM	ENSG00000136111.14	ENST00000377625.6	6182	19	-317	25291	-262	79	5prime_fragment	FALSE	canonical	3	91	junction_11	15.9819112625276	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAAACTTGAAGGTTAGC	-75482137	False	NA	NA	False	AAAAAG	-5	NA	75482431	75309955	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_75310152_75312737_75312899_75326196_75326424_75327751_75327827_75336920_75337041_75341124_75341236_75341495_75341588_75349169_75349303_75356146_75356252_75359768_75359859_75362025_75362608_75481269
transcript_54213.nic	chr13	-	3212	12	ISM	ENSG00000136111.14	ENST00000377625.6	6182	19	-554	25370	-499	0	5prime_fragment	FALSE	canonical	3	91	junction_11	15.9819112625276	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAATCAAAAGAACTGAGG	NA	False	NA	NA	False	AAGAAA	-4	NA	75482668	75310034	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_75310152_75312737_75312899_75326196_75326424_75327751_75327827_75336920_75337041_75341124_75341236_75341495_75341588_75349169_75349303_75356146_75356252_75359768_75359859_75362025_75362608_75481269
transcript_54218.known	chr13	-	847	7	FSM	ENSG00000136111.14	ENST00000413735.1	847	7	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_4	7.35791335154804	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAATCAAAAGAACTGAGG	-75341512	False	19	NA	False	AAGAAA	-4	NA	75341531	75310034	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_75310152_75312737_75312899_75326196_75326424_75327751_75327827_75336920_75337041_75341124_75341236_75341495
transcript_54219.known	chr13	-	486	5	FSM	ENSG00000188243.14	ENST00000355801.4	486	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	1095.24883017513	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTAGTGGTGATGAATG	-75511805	True	NA	-21	True	AATAAA	-18	NA	75537841	75526435	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_75526640_75527812_75527852_75530113_75530267_75537663_75537676_75537763
transcript_54222.known	chr13	-	1669	4	FSM	ENSG00000188243.14	ENST00000682242.1	1669	4	0	0	0	0	multi-exon	FALSE	canonical	3	2167	junction_2	49.4660377318508	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTTTTGAATTTAAAAAGC	-75511805	True	NA	NA	False	AATAAA	-17	NA	75537841	75525213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_75526640_75530113_75530267_75537663_75537676_75537763
transcript_54223.known	chr13	-	374	4	FSM	ENSG00000188243.14	ENST00000486516.5	374	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	1032.33403293486	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTAGTGGTGATGAATG	-75511790	True	NA	-21	True	AATAAA	-18	NA	75537826	75526435	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_75526640_75530310_75530406_75537663_75537676_75537763
transcript_54224.known	chr13	-	392	4	FSM	ENSG00000188243.14	ENST00000497707.5	392	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	1034.28762386915	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTAGTGGTGATGAATG	-75511805	True	NA	-21	True	AATAAA	-18	NA	75537841	75526435	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_75526640_75530310_75530409_75537663_75537676_75537763
transcript_54227.known	chr13	+	4128	15	FSM	ENSG00000261553.5	ENST00000563635.5	4128	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	822.105723996963	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAACAAACAAACAAACAAAC	75540959	True	NA	NA	False	NA	NA	NA	75549772	75807120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_75549863_75549975_75549988_75560752_75560882_75566694_75566852_75567226_75567313_75569459_75569508_75594914_75594991_75621762_75621869_75713181_75713253_75727028_75727099_75760931_75761039_75795400_75795432_75796635_75796750_75800683_75800883_75804288
transcript_54240.nic	chr13	+	975	9	NIC	ENSG00000118939.18	novel	1050	8	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	126	junction_1	547.947519727026	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCTTAACCTGTGTTT	NA	False	NA	6	True	ATTAAA	-17	NA	75549467	75605933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_75549671_75549975_75549988_75560752_75560882_75566694_75566852_75567226_75567313_75569459_75569508_75594914_75594991_75604768_75604828_75605728
transcript_54241.known	chr13	+	931	9	FSM	ENSG00000118939.18	ENST00000377595.8	931	9	0	0	0	0	multi-exon	FALSE	canonical	3	1415	junction_1	137.923665482034	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTTGAAAACTAGCAATAG	75540977	True	NA	93	True	NA	NA	NA	75549790	75606020	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_75549863_75549975_75549988_75560752_75560882_75566694_75566852_75567226_75567313_75569459_75569508_75594914_75594991_75604768_75604828_75605728
transcript_54251.known	chr13	-	3506	5	FSM	ENSG00000005812.11	ENST00000355619.10	3506	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_4	10.8943792847505	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTATTTTACTTTTTAAA	-77025662	True	NA	-5	True	AATAAA	-15	NA	77027159	77005259	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_77007789_77015408_77015581_77018599_77018723_77021512_77021862_77026826
transcript_54253.known	chr13	-	1093	5	FSM	ENSG00000005812.11	ENST00000417323.1	1093	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	30.6216834938904	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGTATTTTTTTTTATA	-77025698	True	NA	NA	False	NA	NA	NA	77027195	77007564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_77007789_77015408_77015581_77018599_77018723_77021656_77021862_77026826
transcript_54256.known	chr13	+	604	4	FSM	ENSG00000102805.16	ENST00000635989.1	604	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	50.2195181179589	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTAGTTCAAGTAGCAAC	76990615	True	NA	NA	False	NA	NA	NA	76992088	76996099	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_76992272_76995062_76995229_76995456_76995514_76995901
transcript_54258.known	chr13	+	5243	4	FSM	ENSG00000102805.16	ENST00000377453.9	5243	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	16.4991582276861	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTAACCTTGTATCTTCA	76990607	True	NA	NA	False	AATAGA	-8	NA	76992080	77005117	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_76992272_76995062_76995229_76995901_76996128_77000457
transcript_5426.known	chr1	+	3462	10	FSM	ENSG00000130766.5	ENST00000253063.4	3462	10	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_3	18.8882352828094	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTTTTTATGGGCTGTT	28257584	True	NA	25	True	AATAAA	-25	NA	28259517	28282491	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28259938_28269182_28269249_28271673_28271872_28272283_28272467_28272580_28272794_28273357_28273509_28274039_28274159_28274824_28275016_28279096_28279242_28280715
transcript_54265.known	chr13	+	2341	3	FSM	ENSG00000102805.16	ENST00000485938.4	2341	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	7.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTAAAGGATATGTTAAC	76990585	True	NA	NA	False	ATTAAA	-45	NA	76992058	76997863	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_76992272_76995062_76995229_76995901
transcript_54267.nic	chr13	-	1570	7	ISM	ENSG00000005810.19	ENST00000683697.1	15359	85	-30	225374	-30	0	5prime_fragment	FALSE	canonical	3	11	junction_5	1.59861050777091	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAGAAAAGAAAAAAAGTC	-77326483	True	NA	NA	False	NA	NA	NA	77327124	77270030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_77270064_77270295_77270539_77273471_77273669_77278757_77278912_77288160_77288377_77296598_77296675_77326473
transcript_54268.known	chr13	-	649	2	FSM	ENSG00000005810.19	ENST00000491491.1	649	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGTAAAGCTGCTGGTAA	-77326409	False	NA	NA	False	AAGAAA	-45	NA	77327050	77296602	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_77296675_77326473
transcript_54270.known	chr13	-	2555	8	FSM	ENSG00000136160.17	ENST00000475537.2	2555	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	460.511029361149	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTATCTACAATTTTTT	-77919359	False	NA	-59	True	NA	NA	NA	77919390	77897349	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_77898335_77899858_77899968_77900520_77900655_77901057_77901208_77903155_77903361_77903494_77903608_77918090_77918625_77919065
transcript_54271.known	chr13	-	4471	8	FSM	ENSG00000136160.17	ENST00000377211.8	4471	8	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_7	418.471611696562	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGACTGTGTGTTTCATTG	NA	False	NA	0	True	ATTAAA	-24	NA	77919768	77895480	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_77898335_77899858_77899968_77900520_77900655_77901057_77901208_77903155_77903361_77903494_77903608_77918090_77918625_77919396
transcript_54273.known	chr13	-	4445	8	FSM	ENSG00000136160.17	ENST00000646605.1	4445	8	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_7	459.750464704407	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATGAAGTTATTCAATTA	-77919366	False	NA	-45	True	AATATA	-14	NA	77919397	77895525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_77898335_77899858_77899968_77900520_77900655_77901057_77901208_77903155_77903361_77903494_77903608_77918090_77918625_77919006
transcript_54275.known	chr13	-	4300	7	FSM	ENSG00000136160.17	ENST00000646607.2	4300	7	0	0	0	0	multi-exon	FALSE	canonical	3	645	junction_6	342.568930614296	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGCTGGACTGTGTGTT	-77913091	True	NA	-6	True	ATTAAA	-18	NA	77918831	77895486	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_77898335_77899858_77899968_77900520_77900655_77901057_77901208_77903155_77903361_77903494_77903608_77918090
transcript_54282.known	chr13	-	1571	7	FSM	ENSG00000136160.17	ENST00000626030.1	1571	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	424.509291875795	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAAACTTGTTCTTTAAT	-77913059	True	NA	NA	False	TATAAA	-5	NA	77918799	77896407	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_77896559_77899858_77899968_77900520_77900655_77901057_77901208_77903155_77903361_77903494_77903608_77918090
transcript_54283.known	chr13	-	3507	6	FSM	ENSG00000152193.8	ENST00000282003.7	3507	6	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	20.0259831219344	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTGATGTCGATGATGA	-78655358	True	NA	-13	True	AATAAA	-20	NA	78659155	78614288	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_78617123_78635109_78635199_78638822_78639072_78642121_78642214_78644861_78644998_78659048
transcript_54288.nic	chr13	-	621	4	ISM	ENSG00000152193.8	ENST00000282003.7	3507	6	-36	24533	-36	-24533	5prime_fragment	FALSE	canonical	3	177	junction_2	20.9814733091416	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTGTGGTTTTTAAAAA	-78655394	True	NA	0	True	AAAAAG	-31	NA	78659191	78638821	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_78639072_78642121_78642214_78644861_78644998_78659048
transcript_54289.known	chr13	-	5230	22	FSM	ENSG00000139746.16	ENST00000622611.4	5230	22	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_9	50.6125740608124	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCAAATTGGCAGAGGCT	-79401292	True	NA	NA	False	NA	NA	NA	79406221	79318867	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_79320711_79322348_79322463_79334343_79334431_79337101_79337303_79341122_79341228_79342663_79342832_79344247_79344323_79344668_79344795_79353152_79353225_79354438_79354562_79355219_79355385_79358273_79358434_79359574_79359687_79365577_79365734_79366054_79366196_79366632_79366873_79368729_79368991_79370944_79371163_79371841_79371931_79377378_79377516_79378788_79378908_79405703
transcript_54291.known	chr13	-	3624	21	FSM	ENSG00000139746.16	ENST00000267229.11	3624	21	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_9	28.9786128032382	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCCAAGACAATGTTCC	-79400859	False	NA	NA	False	AAAAAG	-42	NA	79405788	79319953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_79320711_79322348_79322463_79334343_79334431_79337101_79337303_79341122_79341228_79342663_79342832_79344247_79344323_79344668_79344795_79354438_79354562_79355219_79355385_79358273_79358434_79359574_79359687_79365577_79365719_79366054_79366196_79366632_79366873_79368729_79368991_79370944_79371163_79371841_79371931_79377378_79377516_79378788_79378908_79405703
transcript_54297.nic	chr13	-	2708	16	ISM	ENSG00000139746.16	ENST00000438724.5	5152	21	-43	23933	-9	-22847	5prime_fragment	FALSE	canonical	3	96	junction_9	21.5668469853358	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATGAAGTCTGAAGATAAA	NA	False	NA	14	True	TTTAAA	-42	NA	79406264	79342800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_79342832_79344247_79344323_79344668_79344795_79354438_79354571_79355219_79355385_79358273_79358434_79359574_79359687_79365577_79365719_79366054_79366196_79366632_79366873_79368729_79368991_79370944_79371163_79371841_79371931_79377378_79377516_79378788_79378908_79405703
transcript_54303.known	chr13	-	5258	22	FSM	ENSG00000139746.16	ENST00000438737.3	5258	22	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_9	44.072965680277	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCAAATTGGCAGAGGCT	-79401326	False	NA	NA	False	NA	NA	NA	79406255	79318867	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_79320711_79322348_79322463_79334343_79334431_79337101_79337303_79341122_79341228_79342663_79342832_79344247_79344323_79344668_79344795_79353152_79353225_79354438_79354571_79355219_79355385_79358273_79358434_79359574_79359687_79365577_79365719_79366054_79366196_79366632_79366873_79368729_79368991_79370944_79371163_79371841_79371931_79377378_79377516_79378788_79378908_79405703
transcript_54308.known	chr13	-	2192	3	FSM	ENSG00000139746.16	ENST00000472143.2	2192	3	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	9.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACAAACAAACT	NA	False	NA	NA	False	NA	NA	NA	79406477	79376216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_79377516_79378788_79378908_79405703
transcript_54314.known	chr13	+	2324	8	FSM	ENSG00000102471.15	ENST00000620924.1	2324	8	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_7	15.7519030272406	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTGTTTTGTCTCATT	79481248	False	NA	77	True	AATAAA	-27	NA	79481473	79554096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_79481525_79520809_79520976_79533322_79533457_79539681_79539776_79543557_79543683_79548327_79548395_79551016_79551123_79552515
transcript_54321.known	chr13	-	2286	2	FSM	ENSG00000136158.12	ENST00000377104.4	2286	2	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGCTGTTTTGTCTTCTT	-80337730	True	NA	-22	True	ATTAAA	-1	NA	80341126	80335975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_80337757_80340621
transcript_54328.known	chr13	+	5075	2	FSM	ENSG00000165300.8	ENST00000683689.1	5075	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGGGATGGAAGTAATG	87670970	True	NA	6	True	AATAAA	-21	NA	87671370	87679616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_87672210_87675380
transcript_54331.known	chr13	+	21103	2	FSM	ENSG00000165300.8	ENST00000325089.7	21103	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCCTTACCATTATTCA	87672518	False	NA	106	True	TATAAA	-21	NA	87672614	87696272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_87672826_87675380
transcript_54335.known	chr13	+	792	5	FSM	ENSG00000183098.11	ENST00000617456.1	792	5	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_3	4.94974746830583	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGGTTTTTGGTCAGAT	NA	False	NA	NA	False	NA	NA	NA	94286347	94403217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_94286480_94305979_94306124_94382413_94382551_94398465_94398642_94403014
transcript_54340.nic	chr13	-	1999	12	NIC	ENSG00000088451.11	novel	1797	12	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_11	45.4792660051109	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTAATCCTTCTTTGC	-94593441	True	NA	NA	False	AATAAA	-17	NA	94596278	94574053	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_94574853_94576313_94576412_94577370_94577430_94578004_94578171_94578729_94578774_94579893_94579954_94581090_94581190_94583093_94583237_94590852_94590944_94592240_94592310_94593840_94593908_94595974
transcript_54341.known	chr13	-	1797	12	FSM	ENSG00000088451.11	ENST00000261296.7	1797	12	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_11	20.3571418214959	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTAATCCTTCTTTGC	-94593315	True	NA	NA	False	AATAAA	-17	NA	94596152	94574053	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_94574853_94576313_94576412_94577370_94577430_94578004_94578171_94578729_94578774_94579893_94579954_94581090_94581190_94583093_94583237_94590852_94590944_94592240_94592310_94593840_94593908_94596050
transcript_54348.nic	chr13	-	1142	11	ISM	ENSG00000088451.11	ENST00000261296.7	1797	12	-147	2263	-57	-2263	5prime_fragment	FALSE	canonical	3	118	junction_10	21.2369960210949	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGTATGTTTTGAATTAAT	-94593462	True	NA	NA	False	AATAAA	-6	NA	94596299	94576316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_94576412_94577370_94577430_94578004_94578171_94578729_94578774_94579893_94579954_94581090_94581190_94583093_94583237_94590852_94590944_94592240_94592310_94593840_94593908_94596050
transcript_54354.known	chr13	+	8884	9	FSM	ENSG00000152749.8	ENST00000376958.5	8884	9	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_4	16.8999815088656	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTATTGTCTGCAAATAAT	94599707	True	NA	27	True	AATAAA	-38	NA	94601856	94634661	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_94602073_94605390_94605550_94612189_94612391_94619149_94619331_94619467_94619518_94621077_94621236_94623108_94623301_94625965_94626044_94627012
transcript_54368.known	chr13	+	3287	2	FSM	ENSG00000227640.4	ENST00000438290.2	3287	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACAGGCTGGCTTGCTTGC	94712666	True	NA	NA	False	AATAAA	-17	NA	94712715	94716246	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_94713394_94713637
transcript_54369.known	chr13	-	5855	31	FSM	ENSG00000125257.16	ENST00000645237.2	5855	31	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_18	9.56550515597001	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGAGATCTGTATTTCTG	-95301009	True	NA	-5	True	AATAAA	-19	NA	95301451	95019834	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_95021683_95034604_95034740_95043681_95043788_95044265_95044439_95053094_95053185_95062703_95062860_95071661_95071854_95073203_95073305_95074213_95074325_95075431_95075552_95083139_95083291_95115921_95116002_95161188_95161336_95163121_95163217_95163609_95163648_95164377_95164519_95166157_95166368_95170531_95170629_95177706_95177794_95177996_95178092_95186700_95186893_95188452_95188543_95194835_95194938_95206531_95206782_95207799_95207926_95209433_95209598_95210691_95210782_95234609_95234835_95246974_95247096_95247642_95247754_95301240
transcript_54374.known	chr13	-	2903	21	FSM	ENSG00000125257.16	ENST00000629385.1	2903	21	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	11.4990216975184	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGTGTCTTAACAATTT	-95301004	True	NA	NA	False	ATTAAA	-22	NA	95301446	95095943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_95096180_95115921_95116002_95161188_95161336_95163121_95163217_95163609_95163648_95164377_95164519_95166157_95166368_95170531_95170629_95177706_95177794_95177996_95178092_95186700_95186893_95188452_95188543_95194835_95194938_95206531_95206782_95207799_95207926_95209433_95209598_95210691_95210782_95234609_95234835_95246974_95247096_95247642_95247754_95301240
transcript_54375.nnic	chr13	+	1089	6	NNC	ENSG00000134873.10	novel	2466	5	NA	NA	-56	-1523	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	321.88917347435	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGTAAAATGTTTTCTA	95547260	True	NA	19	True	AATAAA	-15	NA	95552663	95578236	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr13_+_95552974_95557534_95557625_95560131_95560294_95560381_95560464_95577230_95577339_95577899
transcript_54378.known	chr13	+	2466	5	FSM	ENSG00000134873.10	ENST00000299339.3	2466	5	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_1	43.2695042726399	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCTTGAAATATCTTTT	95547316	True	NA	9	True	AATAAA	-19	NA	95552719	95579759	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_95552974_95560131_95560294_95560381_95560464_95577230_95577339_95577899
transcript_54387.known	chr13	-	7491	23	FSM	ENSG00000134874.18	ENST00000376829.7	7491	23	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_21	30.2059391565728	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACAGAAAATGATTAGTAT	-95643889	True	NA	NA	False	AATAAA	-25	NA	95644706	95578201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_95582314_95584735_95584911_95586005_95586137_95587538_95587730_95589153_95589208_95589802_95589933_95590278_95590442_95593943_95594087_95599364_95599425_95606002_95606060_95609456_95609514_95611444_95611494_95612036_95612178_95619884_95619948_95622342_95622481_95624767_95624930_95629988_95630114_95633233_95633322_95641294_95641856_95641993_95642242_95643042_95643258_95643600_95643699_95644376
transcript_54397.nic	chr13	-	3209	21	ISM	ENSG00000134874.18	ENST00000376829.7	7491	23	-26	7825	-26	-1449	5prime_fragment	FALSE	canonical	3	21	junction_19	28.8190908947524	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAATTACAAGAACTAAA	NA	False	NA	NA	False	NA	NA	NA	95644732	95586026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_95586137_95587538_95587730_95589153_95589208_95589802_95589933_95590278_95590442_95593943_95594087_95599364_95599425_95606002_95606060_95609456_95609514_95611444_95611494_95612036_95612178_95619884_95619948_95622342_95622481_95624767_95624930_95629988_95630114_95633233_95633322_95641294_95641856_95641993_95642242_95643042_95643258_95643600_95643699_95644376
transcript_54408.nic	chr13	-	2426	15	ISM	ENSG00000134874.18	ENST00000376829.7	7491	23	-26	21155	-26	0	5prime_fragment	FALSE	canonical	3	21	junction_13	7.18878094175719	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTGATCAGGTTTACCT	NA	False	NA	NA	False	AATAGA	-32	NA	95644732	95599356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_95599425_95606002_95606060_95609456_95609514_95611444_95611494_95612036_95612178_95619884_95619948_95622342_95622481_95624767_95624930_95629988_95630114_95633233_95633322_95641294_95641856_95641993_95642242_95643042_95643258_95643600_95643699_95644376
transcript_54421.nic	chr13	-	1762	8	ISM	ENSG00000134874.18	ENST00000376829.7	7491	23	-26	46657	-26	12150	5prime_fragment	FALSE	canonical	3	21	junction_6	6.18754509363078	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGAAACTAGTTGATGAAA	NA	False	NA	NA	False	AAGAAA	-2	NA	95644732	95624858	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_95624930_95629988_95630114_95633233_95633322_95641294_95641856_95641993_95642242_95643042_95643258_95643600_95643699_95644376
transcript_54423.nic	chr13	-	1691	7	ISM	ENSG00000134874.18	ENST00000376829.7	7491	23	-26	51787	-26	7020	5prime_fragment	FALSE	canonical	3	21	junction_5	6.66874967458085	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCAGGCAGAATTCTGTG	NA	False	NA	NA	False	NA	NA	NA	95644732	95629988	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_95630114_95633233_95633322_95641294_95641856_95641993_95642242_95643042_95643258_95643600_95643699_95644376
transcript_54426.known	chr13	-	1580	6	FSM	ENSG00000134874.18	ENST00000466027.1	1580	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13.5735036007657	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGAGGGTGGCCTAAAGT	-95643849	True	NA	NA	False	AGTAAA	-15	NA	95644666	95637008	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_95637177_95641294_95641856_95641993_95642242_95643042_95643258_95643600_95643699_95644376
transcript_54427.known	chr13	+	5590	12	FSM	ENSG00000102580.15	ENST00000602402.6	5590	12	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	7.92944090449328	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTGCTTTTGATTCAT	95673114	True	NA	21	True	AATAAA	-23	NA	95677138	95794988	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_95677338_95709226_95709338_95723241_95723367_95725177_95725253_95757643_95757797_95760039_95760222_95760678_95760799_95763642_95763749_95763832_95763954_95785938_95786072_95787006_95787156_95790872
transcript_54430.nic	chr13	+	1449	11	ISM	ENSG00000102580.15	ENST00000602402.6	5590	12	-30	7888	-30	-4743	5prime_fragment	FALSE	canonical	3	45	junction_4	8.2	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTGAGAAAAAGTTCATTGA	95673084	True	NA	NA	False	AAGAAA	-9	NA	95677108	95787100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_95677338_95709226_95709338_95723241_95723367_95725177_95725253_95757643_95757797_95760039_95760222_95760678_95760799_95763642_95763749_95763832_95763954_95785938_95786072_95787006
transcript_54431.nic	chr13	+	1354	10	ISM	ENSG00000102580.15	ENST00000602402.6	5590	12	-30	8918	-30	-5773	5prime_fragment	FALSE	canonical	3	45	junction_4	8.50417471917887	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTGAATTATTAATTTAAAA	95673084	True	NA	NA	False	AGTAAA	-3	NA	95677108	95786070	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_95677338_95709226_95709338_95723241_95723367_95725177_95725253_95757643_95757797_95760039_95760222_95760678_95760799_95763642_95763749_95763832_95763954_95785938
transcript_54432.nic	chr13	+	556	5	ISM	ENSG00000102580.15	ENST00000602402.6	5590	12	-30	37329	-30	-34184	5prime_fragment	FALSE	canonical	3	45	junction_4	11.9373363863133	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTGAAAATGAAGAAAAGGAA	95673084	True	NA	NA	False	NA	NA	NA	95677108	95757659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_95677338_95709226_95709338_95723241_95723367_95725177_95725253_95757643
transcript_54433.known	chr13	-	4850	39	FSM	ENSG00000102595.21	ENST00000376747.8	4850	39	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_8	52.3120365592382	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGATTGTTCCTTTTTCCT	-96048565	True	NA	4	True	AATAAA	-21	NA	96053401	95801579	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_95801813_95832926_95833054_95837085_95837203_95853542_95853658_95854314_95854476_95856157_95856341_95859590_95859676_95860787_95860884_95863628_95863715_95867338_95867424_95877278_95877365_95877697_95877857_95884490_95884681_95887891_95887972_95890861_95890965_95894561_95894658_95895179_95895305_95900806_95900939_95902853_95903061_95925679_95925775_95927027_95927127_95927212_95927337_95936923_95937089_95939956_95940092_95947036_95947173_95947995_95948082_95949334_95949455_95970111_95970263_95972579_95972672_95983803_95983865_95986332_95986433_95989972_95990074_95996062_95996136_95999210_95999308_96013306_96013482_96023039_96023153_96023628_96023760_96031888_96031972_96053154
transcript_54440.nic	chr13	-	3667	30	ISM	ENSG00000102595.21	ENST00000376747.8	4850	39	-20	65759	-20	0	5prime_fragment	FALSE	canonical	3	46	junction_4	56.2326575194553	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGGGGGCAGAACTTT	-96048585	True	NA	NA	False	ATTAAA	-32	NA	96053421	95867338	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_95867424_95877278_95877365_95877697_95877857_95884490_95884681_95887891_95887972_95890861_95890965_95894561_95894658_95895179_95895305_95900806_95900939_95902853_95903061_95925679_95925775_95927027_95927127_95927212_95927337_95936923_95937089_95939956_95940092_95947036_95947173_95947995_95948082_95949334_95949455_95970111_95970263_95972579_95972672_95983803_95983865_95986332_95986433_95989972_95990074_95996062_95996136_95999210_95999308_96013306_96013482_96023039_96023153_96023628_96023760_96031888_96031972_96053154
transcript_54448.known	chr13	-	1547	10	FSM	ENSG00000102595.21	ENST00000397618.7	1547	10	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	34.5814479628872	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAATTTTTAATTGTAAT	-96048564	True	NA	NA	False	AATAAA	-16	NA	96053400	95984909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_95985338_95986332_95986433_95989972_95990074_95996062_95996136_95999210_95999308_96013306_96013482_96023039_96023153_96023628_96023760_96031888_96031972_96053154
transcript_54449.known	chr13	-	1233	10	FSM	ENSG00000102595.21	ENST00000376714.7	1233	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	84.0041151255383	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGTTTCTTGTAATTAG	-96053372	False	NA	NA	False	AATAAA	-16	NA	96053482	95983523	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_95983596_95983803_95983865_95986332_95986433_95996062_95996136_95999210_95999308_96013306_96013482_96023039_96023153_96023628_96023760_96031888_96031972_96053154
transcript_5445.nnic	chr1	+	2281	9	NIC	ENSG00000130766.5	novel	3462	10	NA	NA	-45	-1028	combination_of_known_splicesites	TRUE	canonical	3	10	junction_2	53.2011219336585	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGATTATCTCTAGAGAGT	28257539	True	NA	30	True	CATAAA	-11	NA	28259472	28281463	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_28259938_28269182_28269249_28272283_28272467_28272580_28272794_28273357_28273509_28274039_28274159_28274824_28275016_28279096_28279242_28280715
transcript_54450.known	chr13	-	2240	8	FSM	ENSG00000102595.21	ENST00000376712.4	2240	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	65.4800172041916	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATATGCTGTTTGTATA	-96048557	True	NA	NA	False	NA	NA	NA	96053393	95990144	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_95991474_95996062_95996136_95999210_95999308_96013306_96013482_96023039_96023153_96023628_96023760_96031888_96031972_96053154
transcript_54452.nic	chr13	-	768	2	ISM	ENSG00000102595.21	ENST00000621375.5	1004	8	61	35560	-20	-35560	5prime_fragment	FALSE	canonical	3	212	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCCAGGTGTGGTGTTTC	-96048585	True	NA	NA	False	AATAAA	-14	NA	96053421	96031470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_96031972_96053154
transcript_54453.known	chr13	+	5540	2	FSM	ENSG00000125249.7	ENST00000245304.5	5540	2	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTGGTTTTTTTGTT	97433082	True	NA	NA	False	AATAAA	-15	NA	97434168	97469128	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_97434785_97464204
transcript_54457.known	chr13	+	4335	29	FSM	ENSG00000065150.21	ENST00000357602.7	4335	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	392.031131625111	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTGTAAAAACTCAGTACT	NA	False	NA	20	True	AATAAA	-23	NA	97960248	98022489	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_97960404_97969722_97969831_97975890_97975998_97976692_97976787_97982502_97982584_97985420_97985614_97989061_97989165_97990125_97990223_97990432_97990538_97992891_97993015_97993104_97993226_97997530_97997619_98000538_98000646_98002466_98002592_98002683_98002774_98002863_98003038_98006129_98006349_98008058_98008143_98009880_98010014_98010102_98010225_98012245_98012343_98014041_98014215_98015529_98015642_98015725_98015782_98016728_98016852_98018484_98018705_98019580_98019810_98020991_98021134_98021735
transcript_5446.nnic	chr1	+	3309	9	NIC	ENSG00000130766.5	novel	3462	10	NA	NA	-45	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	53.2011219336585	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTTTTTATGGGCTGTT	28257539	True	NA	25	True	AATAAA	-25	NA	28259472	28282491	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_28259938_28269182_28269249_28272283_28272467_28272580_28272794_28273357_28273509_28274039_28274159_28274824_28275016_28279096_28279242_28280715
transcript_54463.known	chr13	+	3419	26	FSM	ENSG00000065150.21	ENST00000490680.5	3419	26	0	0	0	0	multi-exon	FALSE	canonical	3	997	junction_14	157.561599382591	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTCTTTGTTTTGTTTTT	97946334	True	NA	10	True	AATAAA	-19	NA	97976631	98021882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_97976787_97982502_97982584_97985420_97985614_97989061_97989165_97990125_97990223_97990432_97990538_97992891_97993015_97993104_97993226_97997530_97997619_98000538_98000646_98002466_98002592_98002683_98002774_98002863_98003038_98006129_98006349_98008058_98008143_98009880_98010014_98010102_98010225_98012245_98012343_98014041_98014215_98015529_98015642_98015725_98015782_98016728_98016852_98018484_98018705_98019580_98019810_98020991_98021134_98021735
transcript_54511.known	chr13	+	10419	27	FSM	ENSG00000152767.17	ENST00000319562.11	10419	27	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_1	33.3846153846154	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTGTTGAAACTAATTT	98139487	True	NA	NA	False	NA	NA	NA	98143093	98455176	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_98143493_98213219_98213414_98343761_98343867_98365394_98365438_98368116_98368196_98377820_98377919_98384729_98384845_98385666_98385815_98388382_98388479_98389956_98390121_98390811_98390881_98393642_98393719_98395226_98395477_98409337_98409526_98410733_98410824_98411900_98412035_98424571_98424651_98431042_98431281_98435575_98435707_98438803_98438873_98439106_98439197_98439960_98440044_98440122_98440236_98440669_98440837_98446097_98446206_98446665_98446818_98448235
transcript_54537.known	chr13	+	13532	13	FSM	ENSG00000152767.17	ENST00000596580.2	13532	13	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_1	23.7888571020598	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGGCCTTTTTCTCCGG	98143401	False	NA	7	True	AATAAA	-20	NA	98143415	98407494	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_98143493_98213219_98213414_98343761_98343867_98365394_98365438_98368116_98368196_98377820_98377919_98384729_98384845_98385666_98385815_98388382_98388479_98389956_98390121_98390811_98390881_98393642_98393719_98395226
transcript_54541.nic	chr13	+	1103	7	ISM	ENSG00000152767.17	ENST00000596580.2	13532	13	-405	22663	-83	0	5prime_fragment	FALSE	canonical	3	265	junction_1	19.675845315739	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATAACCACATGTAAGTC	98142989	False	NA	NA	False	AATACA	-43	NA	98143010	98384831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_98143493_98213219_98213414_98343761_98343867_98365394_98365438_98368116_98368196_98377820_98377919_98384729
transcript_54544.known	chr13	-	9605	11	FSM	ENSG00000102572.15	ENST00000539966.6	9605	11	0	0	0	0	multi-exon	TRUE	canonical	3	593	junction_10	75.8725246713196	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCCTCATTCCATCTCT	-98562294	True	NA	NA	False	AATAAA	-17	NA	98577107	98445184	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_98453210_98457167_98457305_98460371_98460441_98461773_98461898_98463690_98463837_98466375_98466562_98474820_98474979_98475249_98475359_98482264_98482322_98519242_98519474_98576744
transcript_54546.known	chr13	-	3124	23	FSM	ENSG00000088386.17	ENST00000376503.10	3124	23	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_2	2.93067278542089	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAAGTGTTCATGTATCT	-98752511	False	NA	-6	True	AATAAA	-14	NA	98752672	98683800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_98684916_98686189_98686298_98687580_98687725_98688247_98688357_98688469_98688578_98702479_98702530_98704288_98704436_98706133_98706254_98708685_98708768_98709571_98709661_98709741_98709775_98709866_98709912_98711853_98711944_98712497_98712585_98715877_98715961_98719236_98719321_98721494_98721586_98721803_98721904_98723911_98724032_98726122_98726265_98726367_98726450_98726842_98726860_98752594
transcript_54547.known	chr13	-	1771	2	FSM	ENSG00000228889.8	ENST00000658188.1	1765	2	-9	3	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCTTAGCATCAGGAA	-99200200	True	NA	-15	True	AATAAA	-16	NA	99200710	99196376	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_99197803_99200365
transcript_54554.nic	chr13	+	2328	10	NIC	ENSG00000134882.16	novel	2259	9	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_2	205.286129735373	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTCAGTATTTTTCTAT	99194642	True	NA	16	True	AATAAA	-17	NA	99200846	99386427	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_99200940_99201428_99201568_99238426_99238555_99243831_99243952_99244514_99244625_99314096_99314221_99318021_99318070_99340319_99340566_99367786_99367907_99385227
transcript_54559.known	chr13	+	2259	9	FSM	ENSG00000134882.16	ENST00000403766.8	2259	9	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_1	16.8962828752362	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCGCACTGCTCGTCTT	99194649	True	NA	25	True	AATAAA	-40	NA	99200853	99386504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_99200940_99238426_99238555_99243831_99243952_99244514_99244625_99314096_99314221_99318021_99318070_99340319_99340566_99367786_99367907_99385227
transcript_54563.nnic	chr13	+	2110	8	NIC	ENSG00000134882.16	novel	2259	9	NA	NA	30	-2	combination_of_known_splicesites	FALSE	canonical	3	18	junction_7	172.557828224722	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTCTTCAGTATTTTTCT	99194599	True	NA	14	True	AATAAA	-15	NA	99200803	99386425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_99200940_99238426_99238555_99243831_99243952_99244514_99244625_99314096_99314221_99318021_99318070_99340319_99340566_99385227
transcript_54572.known	chr13	+	3858	19	FSM	ENSG00000125304.10	ENST00000642475.1	3858	19	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_1	478.6307115352	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTGAGTCTTTCAATTT	99498932	False	NA	-44	True	TTTAAA	-7	NA	99498955	99563334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_99499470_99500596_99500785_99501018_99501778_99517613_99517682_99520035_99520130_99529466_99529595_99536607_99536738_99537738_99537864_99539445_99539558_99540713_99540794_99541558_99541668_99543862_99543996_99546984_99547105_99549164_99549223_99552166_99552327_99554303_99554456_99555535_99555648_99559362_99559535_99562690
transcript_54575.known	chr13	+	3417	17	FSM	ENSG00000125304.10	ENST00000376387.5	3417	17	0	0	0	0	multi-exon	FALSE	canonical	3	1312	junction_3	160.328958706779	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTTTTTTTTTGAGA	99491788	True	NA	NA	False	NA	NA	NA	99501471	99564048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_99501778_99517613_99517682_99520035_99520130_99529466_99529595_99536607_99536738_99537738_99537864_99539445_99539558_99540713_99540794_99541558_99541668_99543862_99543996_99546984_99547105_99549164_99549223_99552166_99552327_99554303_99554456_99555535_99555648_99559362_99559535_99562690
transcript_54577.known	chr13	+	1169	9	FSM	ENSG00000125246.16	ENST00000339105.9	1181	9	6	6	6	-6	multi-exon	FALSE	canonical	3	50	junction_8	24.6056395974581	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGAGACTCTGGACGACTGT	99605424	True	NA	5	True	ATTAAA	-16	NA	99606695	99892564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_99606758_99772823_99773011_99858860_99859050_99862990_99863093_99864817_99864912_99866239_99866408_99870937_99871063_99891317_99891438_99892442
transcript_5458.known	chr1	+	1106	4	FSM	ENSG00000130772.14	ENST00000398997.2	1106	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	30.24345659257	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTCTGTGTAATTCTGA	28326210	True	NA	7	True	AATAAA	-13	NA	28329054	28335964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28329181_28330596_28330736_28334416_28335087_28335793
transcript_54583.nic	chr13	+	992	5	ISM	ENSG00000125246.16	ENST00000339105.9	1181	9	-25	27332	-4	0	5prime_fragment	FALSE	canonical	3	89	junction_3	14.6692706021806	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTGCTTCAGTATTTTGT	99605393	True	NA	8	True	AATAAA	-22	NA	99606664	99865238	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_99606758_99772823_99773011_99858860_99859050_99862990_99863093_99864817
transcript_54585.known	chr13	-	4639	2	FSM	ENSG00000139800.9	ENST00000267294.5	4497	2	-142	0	-142	0	multi-exon	FALSE	canonical	3	371	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAATGTCTTCCCTTGGTC	-99971834	False	NA	29	True	AATAGA	-17	NA	99971909	99962963	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_99965820_99970126
transcript_54586.known	chr13	-	913	2	FSM	ENSG00000274605.3	ENST00000612598.2	1038	2	119	6	102	-6	multi-exon	FALSE	canonical	3	205	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAGATTTGAGGATTGC	-100086818	True	NA	-7	True	AATAAA	-19	NA	100088848	100086030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_100086728_100088632
transcript_54598.known	chr13	+	2484	24	FSM	ENSG00000175198.17	ENST00000376285.6	2484	24	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_10	29.9982986285042	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTAGTTTGCCCTTTCTTT	100083276	True	NA	16	True	AATAAA	-19	NA	100089092	100530435	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_100089226_100102882_100102961_100111840_100111889_100111992_100112062_100154978_100155093_100157286_100157341_100209331_100209464_100235841_100235879_100257594_100257674_100262728_100262832_100268688_100268784_100273195_100273347_100301459_100301604_100302923_100302999_100307191_100307261_100309832_100309909_100330560_100330672_100340156_100340260_100368471_100368575_100425632_100425732_100449251_100449306_100515426_100515568_100527674_100527753_100530097
transcript_5460.nnic	chr1	+	1304	4	NNC	ENSG00000130772.14	novel	1829	3	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	33.0252428706689	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCTGTGTAATTCTGAT	28326172	True	NA	8	True	AATAAA	-14	NA	28329016	28335965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_28329181_28330596_28330736_28334416_28335161_28335708
transcript_54602.known	chr13	+	2418	23	FSM	ENSG00000175198.17	ENST00000376279.7	2418	23	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_21	61.3643265954447	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTAGTTTGCCCTTTC	NA	False	NA	13	True	AATAAA	-16	NA	100089014	100530432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_100089226_100102882_100102961_100111840_100111889_100111992_100112062_100154978_100155093_100157286_100157341_100209331_100209464_100235841_100235879_100257594_100257674_100262728_100262832_100268688_100268784_100273195_100273347_100301459_100301604_100302923_100302999_100307191_100307261_100309832_100309909_100330560_100330672_100340156_100340260_100368471_100368575_100425632_100425732_100449251_100449306_100527674_100527753_100530097
transcript_54609.known	chr13	+	2481	23	FSM	ENSG00000175198.17	ENST00000376286.8	2481	23	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	70.0828464882872	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTAGTTTGCCCTTTC	NA	False	NA	13	True	AATAAA	-16	NA	100089014	100530432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_100089226_100111840_100111889_100111992_100112062_100154978_100155093_100157286_100157341_100209331_100209464_100235841_100235879_100257594_100257674_100262728_100262832_100268688_100268784_100273195_100273347_100301459_100301604_100302923_100302999_100307191_100307261_100309832_100309909_100330560_100330672_100340156_100340260_100368471_100368575_100425632_100425732_100449251_100449306_100515426_100515568_100527674_100527753_100530097
transcript_5462.nnic	chr1	+	1563	4	NNC	ENSG00000130772.14	novel	1829	3	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	33.0252428706689	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCTGTGTAATTCTGAT	28326172	True	NA	8	True	AATAAA	-14	NA	28329016	28335965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_28329181_28330596_28330736_28334416_28335286_28335574
transcript_54625.known	chr13	-	393	3	FSM	ENSG00000134864.11	ENST00000471912.1	393	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCAGCCTTTCGGGCGCG	-100588530	True	NA	NA	False	NA	NA	NA	100588731	100532513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_100532602_100583824_100583998_100588599
transcript_54626.known	chr13	-	2644	3	FSM	ENSG00000134864.11	ENST00000683975.1	2644	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	4.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTATAAATCCTTCATTCC	-100588588	True	NA	NA	False	ATTAAA	-18	NA	100588789	100530179	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_100532602_100583824_100583998_100588740
transcript_54633.known	chr13	-	348	1	FSM	ENSG00000234354.3	ENST00000427219.1	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTGAGTTCTTAAAGAC	-100540236	False	NA	NA	False	NA	NA	NA	100540248	100539900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_100539900_100540200
transcript_54635.known	chr13	-	3911	19	FSM	ENSG00000125247.16	ENST00000342624.10	3911	19	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_2	29.0688837074973	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTTTTTTTTTTTTTG	-100672978	True	NA	-2	True	AATAAA	-16	NA	100674795	100603624	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_100605143_100606357_100606428_100612397_100612511_100614315_100614431_100625534_100625677_100625784_100625893_100626070_100626151_100634804_100634937_100635023_100635196_100636531_100636735_100637537_100637703_100637929_100638023_100642210_100642312_100656380_100656469_100662963_100663181_100664220_100664337_100668578_100668795_100670359_100670570_100674743
transcript_54643.known	chr13	-	3483	18	FSM	ENSG00000125247.16	ENST00000376234.7	3483	18	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_17	39.9998269892452	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATATTGCCTTCTTAAT	-100673062	True	NA	-4	True	AGTAAA	-26	NA	100674879	100603926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_100605143_100606357_100606428_100612397_100612511_100614315_100614431_100625534_100625677_100625784_100625893_100626070_100626151_100634804_100634937_100635023_100635196_100636531_100636735_100637537_100637703_100637929_100638023_100642210_100642312_100656380_100656469_100662963_100663181_100664220_100664337_100668578_100668795_100674743
transcript_54647.nnic	chr13	-	3667	18	NIC	ENSG00000125247.16	novel	3911	19	NA	NA	-62	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_13	40.5817556635191	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATATTGCCTTCTTAAT	-100674901	False	NA	-4	True	AGTAAA	-26	NA	100674941	100603926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_100605143_100606357_100606428_100612397_100612511_100614315_100614431_100625534_100625677_100625784_100625893_100626070_100626151_100634804_100634937_100635023_100635196_100636531_100636735_100637537_100637703_100637929_100638023_100642210_100642312_100662963_100663181_100664220_100664337_100668578_100668795_100670359_100670570_100674743
transcript_5465.known	chr1	+	1829	3	FSM	ENSG00000130772.14	ENST00000373842.9	1829	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	7	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCTGTGTAATTCTGAT	28326195	True	NA	8	True	AATAAA	-14	NA	28329039	28335965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28329181_28330596_28330736_28334416
transcript_54668.nic	chr13	-	2999	15	ISM	ENSG00000125247.16	ENST00000342624.10	3911	19	-146	21152	-62	133	5prime_fragment	FALSE	canonical	3	125	junction_9	20.7906228862918	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGTTCATTCTAACCAA	-100674901	False	NA	NA	False	AATAAA	-18	NA	100674941	100624776	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_100625677_100625784_100625893_100626070_100626151_100634804_100634937_100635023_100635196_100636531_100636735_100637537_100637703_100637929_100638023_100642210_100642312_100656380_100656469_100662963_100663181_100664220_100664337_100668578_100668795_100670359_100670570_100674743
transcript_5467.known	chr1	+	862	3	FSM	ENSG00000130772.14	ENST00000479574.5	862	3	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_1	26	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATATGTTTGCTTTTTTT	28326157	True	NA	NA	False	NA	NA	NA	28329001	28335016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28329125_28330596_28330736_28334416
transcript_54672.nic	chr13	-	2323	15	ISM	ENSG00000125247.16	ENST00000342624.10	3911	19	-146	21828	-62	0	5prime_fragment	FALSE	canonical	3	125	junction_9	20.7906228862918	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGCCCATACATTTTATA	-100674901	False	NA	-10	True	AATAAA	-19	NA	100674941	100625452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_100625677_100625784_100625893_100626070_100626151_100634804_100634937_100635023_100635196_100636531_100636735_100637537_100637703_100637929_100638023_100642210_100642312_100656380_100656469_100662963_100663181_100664220_100664337_100668578_100668795_100670359_100670570_100674743
transcript_54701.known	chr13	+	1074	1	FSM	ENSG00000272143.1	ENST00000606448.1	1074	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATGTGTCGTGAACAGAG	102394119	True	NA	8	True	ATTAAA	-16	NA	102394629	102395703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_102394600_102395700
transcript_54704.known	chr13	+	5484	30	FSM	ENSG00000134900.12	ENST00000376052.5	5484	30	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_24	70.5195767255149	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGCCTATTCATTTGTG	102590661	True	NA	NA	False	AATAAA	-17	NA	102596985	102679958	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_102597204_102604792_102604922_102614100_102614197_102616395_102616501_102618721_102618847_102622876_102623041_102627011_102627167_102627847_102627925_102629481_102629610_102630095_102630196_102633949_102634099_102635586_102635703_102636223_102636393_102637081_102637240_102638238_102638316_102640269_102640377_102643221_102643377_102644556_102644674_102644908_102645010_102646293_102646391_102647206_102647345_102648906_102649152_102649407_102649487_102651358_102651398_102657055_102657208_102663647_102663745_102664794_102664926_102674282_102674491_102676295_102676416_102678226
transcript_54712.known	chr13	+	3931	29	FSM	ENSG00000134900.12	ENST00000376065.8	3931	29	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_8	43.1062255790677	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTGACGTGTGGCTTAA	102590678	True	NA	10	True	ATTAAA	-23	NA	102597002	102678461	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_102597204_102604792_102604922_102614100_102614197_102616395_102616501_102618721_102618847_102622876_102623041_102627011_102627167_102627847_102627925_102629481_102629610_102630095_102630196_102633949_102634099_102635586_102635703_102636223_102636393_102637081_102637240_102638238_102638316_102640269_102640377_102643221_102643377_102644556_102644674_102644908_102645010_102646293_102646391_102647206_102647345_102648906_102649152_102649407_102649487_102657055_102657208_102663647_102663745_102664794_102664926_102674282_102674491_102676295_102676416_102678226
transcript_54715.nic	chr13	+	3711	28	ISM	ENSG00000134900.12	ENST00000376065.8	3931	29	-67	2098	-50	0	5prime_fragment	FALSE	canonical	3	243	junction_8	41.4102563122515	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAACTTGTGGAAGAAAAAC	102590611	True	NA	NA	False	AATAAA	-30	NA	102596935	102676363	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_102597204_102604792_102604922_102614100_102614197_102616395_102616501_102618721_102618847_102622876_102623041_102627011_102627167_102627847_102627925_102629481_102629610_102630095_102630196_102633949_102634099_102635586_102635703_102636223_102636393_102637081_102637240_102638238_102638316_102640269_102640377_102643221_102643377_102644556_102644674_102644908_102645010_102646293_102646391_102647206_102647345_102648906_102649152_102649407_102649487_102657055_102657208_102663647_102663745_102664794_102664926_102674282_102674491_102676295
transcript_5472.known	chr1	+	3375	15	FSM	ENSG00000204138.13	ENST00000632421.1	3375	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	30.7312245650138	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATCGGTTAGATGAGA	28363475	True	NA	NA	False	NA	NA	NA	28369709	28497545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28369826_28407409_28407464_28432930_28433047_28459084_28459259_28460211_28460293_28465684_28465850_28466381_28466769_28473553_28474152_28476106_28476292_28480450_28480605_28489169_28489226_28490950_28491013_28491649_28491788_28493014_28493092_28496533
transcript_54720.nic	chr13	+	3162	25	ISM	ENSG00000134900.12	ENST00000376052.5	5484	30	-43	22828	-43	5	5prime_fragment	FALSE	canonical	3	70	junction_24	66.93088267426	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATTCAGAAAAAGAGAAAGA	102590618	True	NA	35	True	NA	NA	NA	102596942	102657130	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_102597204_102604792_102604922_102614100_102614197_102616395_102616501_102618721_102618847_102622876_102623041_102627011_102627167_102627847_102627925_102629481_102629610_102630095_102630196_102633949_102634099_102635586_102635703_102636223_102636393_102637081_102637240_102638238_102638316_102640269_102640377_102643221_102643377_102644556_102644674_102644908_102645010_102646293_102646391_102647206_102647345_102648906_102649152_102649407_102649487_102651358_102651398_102657055
transcript_54722.nic	chr13	+	3118	24	ISM	ENSG00000134900.12	ENST00000376065.8	3931	29	-60	21336	-43	0	5prime_fragment	FALSE	canonical	3	243	junction_8	34.032731937066	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGATTCAGAAAAAGAG	102590618	True	NA	30	True	NA	NA	NA	102596942	102657125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_102597204_102604792_102604922_102614100_102614197_102616395_102616501_102618721_102618847_102622876_102623041_102627011_102627167_102627847_102627925_102629481_102629610_102630095_102630196_102633949_102634099_102635586_102635703_102636223_102636393_102637081_102637240_102638238_102638316_102640269_102640377_102643221_102643377_102644556_102644674_102644908_102645010_102646293_102646391_102647206_102647345_102648906_102649152_102649407_102649487_102657055
transcript_54729.nnic	chr13	+	2126	14	NNC	ENSG00000134900.12	novel	4341	27	NA	NA	-43	5514	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_13	68.0128773048894	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCATCTTTAATTTTTGG	102590618	True	NA	NA	False	AAAAAG	-9	NA	102596942	102637046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr13_+_102597204_102604792_102604922_102614100_102614197_102616395_102616501_102618721_102618847_102622876_102623041_102627011_102627167_102627847_102627925_102629481_102629610_102630095_102630196_102633949_102634099_102635586_102635703_102636223_102636393_102636694
transcript_54732.known	chr13	+	691	3	FSM	ENSG00000134900.12	ENST00000490010.1	691	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	154	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGTTTGTCTTTTCTCAG	102590708	True	NA	NA	False	AATAAA	-14	NA	102597032	102608022	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_102597204_102604792_102604922_102607631
transcript_54735.known	chr13	-	1362	6	FSM	ENSG00000151287.17	ENST00000376032.9	1362	6	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_5	26.0353605698097	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGTTCACTGAAGGCTT	-102772290	True	NA	1	True	AATAAA	-15	NA	102773786	102765887	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_102766581_102767272_102767479_102768259_102768312_102769310_102769542_102770011_102770087_102773681
transcript_54739.known	chr13	-	1038	5	FSM	ENSG00000151287.17	ENST00000376021.8	1038	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	60.0187470712277	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTTGTCTTATTGAT	-102772263	True	NA	0	True	ATTAAA	-23	NA	102773759	102766109	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_102766581_102767272_102767479_102768259_102768312_102769310_102769542_102773681
transcript_54740.known	chr13	-	959	5	FSM	ENSG00000151287.17	ENST00000376029.3	959	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	65.9640053362438	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTTGTCTTATTGAT	-102772315	True	NA	0	True	ATTAAA	-23	NA	102773811	102766109	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_102766581_102768259_102768312_102769310_102769542_102770011_102770087_102773681
transcript_54744.known	chr13	-	828	4	FSM	ENSG00000151287.17	ENST00000376022.5	828	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	80.6597793203031	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTTGTCTTATTGAT	-102772259	True	NA	0	True	ATTAAA	-23	NA	102773755	102766109	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_102766581_102768259_102768312_102769310_102769542_102773681
transcript_54746.known	chr13	-	2029	10	FSM	ENSG00000134901.13	ENST00000376004.5	2029	10	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_6	10.9217192152739	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACGTTGTGCTAATTATTA	-102797630	True	NA	-2	True	AATAAA	-21	NA	102798976	102784280	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_102784513_102786231_102786340_102787833_102787924_102789011_102789222_102790900_102791139_102791257_102791431_102793340_102793419_102793600_102793807_102796803_102797010_102798488
transcript_54750.known	chr13	+	3888	15	FSM	ENSG00000134899.24	ENST00000652225.2	3888	15	0	0	0	0	multi-exon	FALSE	non_canonical	3	73	junction_8	12.0781891466074	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTATTTAGTGTGTGGTT	102845201	True	NA	23	True	AATAAA	-20	NA	102846031	102875995	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_102846355_102852117_102852294_102853756_102853873_102854287_102854375_102856051_102856113_102858274_102858419_102861506_102861715_102862029_102863104_102865666_102865912_102866261_102866382_102866631_102866846_102868112_102868258_102872197_102872399_102873258_102873344_102875306
transcript_54752.known	chr13	+	4279	14	FSM	ENSG00000134899.24	ENST00000682869.1	4279	14	0	0	0	0	multi-exon	FALSE	non_canonical	3	73	junction_7	11.8476522528865	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTAACTGGTGGCACG	102845202	True	NA	0	True	AATGAA	-19	NA	102846032	102875972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_102846355_102852117_102852294_102853756_102854375_102856051_102856113_102858274_102858419_102861506_102861715_102862029_102863104_102865666_102865912_102866261_102866382_102866631_102866846_102868112_102868258_102872197_102872399_102873258_102873344_102875306
transcript_54753.nic	chr13	+	3241	13	ISM	ENSG00000134899.24	ENST00000682632.1	4733	14	-249	3704	-54	-3615	5prime_fragment	TRUE	canonical	3	73	junction_8	11.6010057035299	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACGGACATTGCAACTCAC	NA	False	NA	NA	False	NA	NA	NA	102845776	102872270	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_102846355_102852117_102852294_102853756_102853873_102854287_102854375_102856051_102856113_102858274_102858419_102861506_102861715_102862029_102863104_102865666_102865912_102866261_102866382_102866631_102866846_102868112_102868258_102872197
transcript_54759.known	chr13	+	3789	11	FSM	ENSG00000134897.14	ENST00000257336.6	3789	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	9.1874914965947	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATGAATGTTTTTAAAC	102798873	True	NA	NA	False	AATAAA	-21	NA	102799118	102841533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_102799522_102805306_102805391_102807145_102807746_102816427_102816555_102821036_102821133_102821742_102821848_102822064_102822160_102831564_102831698_102834465_102834553_102838642_102838740_102839571
transcript_54765.nic	chr13	+	2908	11	NIC	ENSG00000134897.14	novel	1962	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	8.42614977317636	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACTCTGTCTCAAAAAAAA	102800112	True	NA	NA	False	NA	NA	NA	102800351	102840671	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_102800736_102805306_102805391_102807145_102807746_102816427_102816555_102821036_102821133_102821742_102821848_102822064_102822160_102831564_102831698_102834465_102834553_102838642_102838740_102839571
transcript_54772.known	chr13	+	4024	15	FSM	ENSG00000134899.24	ENST00000652613.1	4024	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	27.1251822151314	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAACTGGTGGCACGG	102845835	False	NA	1	True	AATGAA	-20	NA	102845866	102875973	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_102846355_102852124_102852294_102853756_102853873_102854287_102854375_102856051_102856113_102858274_102858419_102861506_102861715_102862029_102863104_102865666_102865912_102866261_102866382_102866631_102866846_102868112_102868258_102872197_102872399_102873258_102873344_102875306
transcript_54773.known	chr13	+	2988	11	FSM	ENSG00000134897.14	ENST00000651855.1	2988	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	16.7797497001594	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGGCGACAGGGCAAGAC	102798894	True	NA	NA	False	NA	NA	NA	102799139	102840655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_102799522_102805057_102805240_102807145_102807746_102816427_102816555_102821036_102821133_102821742_102821848_102822064_102822160_102831564_102831698_102834465_102834553_102838642_102838740_102839571
transcript_54774.known	chr13	-	4995	5	FSM	ENSG00000125266.8	ENST00000646441.1	4995	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_4	5.70087712549569	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCTTCAAAGTACTTTTC	-106532185	True	NA	-13	True	AATAAA	-23	NA	106535662	106489744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_106493429_106494880_106494995_106495747_106495841_106512528_106512813_106534842
transcript_54778.nic	chr13	-	1810	5	NIC	ENSG00000134884.15	novel	821	5	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	3	186	junction_3	619.702146196058	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTGAAGCAATTTTTTT	-106568163	False	NA	-7	True	AATAAA	-35	NA	106568180	106543326	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_106544161_106557047_106557132_106557558_106557617_106559431_106559658_106567572
transcript_54783.nic	chr13	-	3625	4	NIC	ENSG00000134884.15	novel	4009	3	NA	NA	-43	0	intron_retention	FALSE	canonical	3	258	junction_2	567.145679893819	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTGAAGCAATTTTTTT	-106568163	False	NA	-7	True	AATAAA	-35	NA	106568180	106543326	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_106544161_106557047_106557132_106557558_106559658_106567572
transcript_54784.known	chr13	-	3363	4	FSM	ENSG00000134884.15	ENST00000400198.8	3363	4	0	0	0	0	multi-exon	FALSE	canonical	3	931	junction_2	251.142721707532	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGTGTGAGGACTCTTT	-106547822	True	NA	NA	False	TATAAA	-17	NA	106568137	106541672	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_106544161_106557047_106557132_106559431_106559658_106567572
transcript_54789.known	chr13	-	4009	3	FSM	ENSG00000134884.15	ENST00000472226.2	4009	3	0	0	0	0	multi-exon	FALSE	canonical	3	1418	junction_2	41	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTGAAGCAATTTTTTT	-106547822	True	NA	-7	True	AATAAA	-35	NA	106568137	106543326	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_106544161_106557047_106559658_106567572
transcript_54791.nic	chr13	-	682	2	ISM	ENSG00000134884.15	ENST00000360629.3	361	4	-557	2478	-43	-2478	5prime_fragment	FALSE	canonical	3	1418	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTGGAGGAAGAACTGGAG	-106568163	False	NA	-20	True	AAGAAA	-34	NA	106568180	106559583	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_106559658_106567572
transcript_54792.known	chr13	-	9264	3	FSM	ENSG00000204442.4	ENST00000375915.4	9264	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	4.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTACGCCTTATTTC	-107867431	True	NA	NA	False	ATTAAA	-38	NA	107867496	107163509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_107170787_107210583_107210756_107865681
transcript_54793.known	chr13	-	3981	3	FSM	ENSG00000174405.15	ENST00000442234.6	3981	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	5.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTCTTATGTTCTATTC	-108214954	True	NA	NA	False	AATAAA	-22	NA	108215536	108207441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_108211297_108214537_108214611_108215483
transcript_54794.known	chr13	+	5313	2	FSM	ENSG00000139826.6	ENST00000375898.4	5313	2	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGTCTTCAGATAGTTT	108216695	True	NA	12	True	AATAAA	-21	NA	108218391	108234243	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_108218660_108229198
transcript_54801.known	chr13	-	8156	2	FSM	ENSG00000185950.9	ENST00000375856.5	8156	2	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGATTTTTAAATTACGGT	-109783093	True	NA	NA	False	AATAAA	-18	NA	109786583	109752694	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_109756309_109782041
transcript_54803.known	chr13	-	6540	52	FSM	ENSG00000187498.16	ENST00000375820.10	6540	52	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_38	55.8764702786052	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATTTTTATTTTGCACT	-110302735	True	NA	-7	True	AATAAA	-23	NA	110307157	110148962	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_110150445_110152333_110152507_110155282_110155398_110161191_110161370_110162229_110162443_110163462_110163562_110164861_110164991_110166231_110166304_110167157_110167231_110169628_110169763_110170546_110170733_110172719_110172771_110173899_110173999_110174445_110174527_110174622_110174750_110175217_110175358_110176423_110176514_110176625_110176725_110176884_110177038_110177841_110177932_110178063_110178232_110178922_110179037_110179270_110179422_110181291_110181390_110182992_110183098_110183183_110183277_110186384_110186554_110187137_110187330_110192213_110192285_110192829_110192914_110195022_110195119_110198466_110198632_110200853_110200890_110201437_110201523_110203565_110203608_110205352_110205407_110205493_110205539_110206664_110206716_110206864_110206892_110207402_110207490_110208848_110208891_110209391_110209428_110209979_110210043_110210128_110210213_110211646_110211674_110211868_110211923_110212416_110212480_110212573_110212619_110213781_110213827_110213925_110214016_110242674_110242735_110306943
transcript_54814.nic	chr13	-	3318	37	ISM	ENSG00000187498.16	ENST00000375820.10	6540	52	-50	26315	-50	3589	5prime_fragment	FALSE	canonical	3	132	junction_23	30.9800812151738	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAGAAAGGGCAGGCAGG	-110302785	True	NA	NA	False	NA	NA	NA	110307207	110175277	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_110175358_110176423_110176514_110176625_110176725_110176884_110177038_110177841_110177932_110178063_110178232_110178922_110179037_110179270_110179422_110181291_110181390_110182992_110183098_110183183_110183277_110186384_110186554_110187137_110187330_110192213_110192285_110192829_110192914_110195022_110195119_110198466_110198632_110200853_110200890_110201437_110201523_110203565_110203608_110205352_110205407_110205493_110205539_110206664_110206716_110206864_110206892_110207402_110207490_110208848_110208891_110209391_110209428_110209979_110210043_110210128_110210213_110211646_110211674_110211868_110211923_110212416_110212480_110212573_110212619_110213781_110213827_110213925_110214016_110242674_110242735_110306943
transcript_54820.nic	chr13	-	1572	22	ISM	ENSG00000187498.16	ENST00000543140.6	2549	25	-99	4294	-73	2502	5prime_fragment	FALSE	canonical	3	132	junction_8	14.9408508774872	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGGAGAGAAAGGTAAGAAA	-110302808	True	NA	NA	False	NA	NA	NA	110307230	110195034	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_110195119_110198466_110198632_110200853_110200890_110201437_110201523_110203565_110203608_110205352_110205407_110205493_110205539_110206664_110206716_110206864_110206892_110207402_110207490_110208848_110208891_110209391_110209428_110209979_110210043_110210128_110210213_110211646_110211674_110211868_110211923_110212416_110212480_110212573_110212619_110213781_110213827_110213925_110214016_110242674_110242735_110306943
transcript_54821.nic	chr13	-	1013	13	ISM	ENSG00000187498.16	ENST00000543140.6	2549	25	-156	16689	-130	-1933	5prime_fragment	FALSE	canonical	3	147	junction_6	13.7059901746159	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGACTTCGCCACCAAGGG	-110307276	False	NA	NA	False	AAGAAA	-3	NA	110307287	110207429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_110207490_110208848_110208891_110209391_110209428_110209979_110210043_110210128_110210213_110211646_110211674_110211868_110211923_110212416_110212480_110212573_110212619_110213781_110213827_110213925_110214016_110242674_110242735_110306943
transcript_54823.known	chr13	-	2412	10	FSM	ENSG00000187498.16	ENST00000650424.1	2412	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	97.5465700746742	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTATTTCTTAAGAATTC	-110169633	False	NA	-60	True	TTTAAA	-1	NA	110169660	110149110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_110150445_110152339_110152507_110155282_110155398_110161191_110161370_110162229_110162443_110163462_110163562_110164861_110164991_110166231_110166304_110167157_110167231_110169628
transcript_54824.known	chr13	+	6446	48	FSM	ENSG00000134871.19	ENST00000360467.7	6446	48	0	0	0	0	multi-exon	TRUE	canonical	3	200	junction_17	70.691917613931	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACACCCCAACCAGGCC	110296364	True	NA	NA	False	NA	NA	NA	110307283	110513209	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_110307529_110307859_110307948_110308068_110308124_110357471_110357553_110424733_110424869_110424952_110424998_110428466_110428584_110429884_110429957_110430400_110430437_110430544_110430608_110432324_110432361_110434400_110434443_110436268_110436368_110438001_110438038_110438617_110438669_110439788_110439834_110445828_110445883_110446797_110446865_110449678_110449790_110450304_110450455_110457342_110457436_110458770_110458935_110462113_110462187_110462277_110462385_110465404_110465607_110466002_110466063_110467039_110467097_110469216_110469325_110472928_110473151_110478002_110478165_110480219_110480391_110482515_110482660_110484904_110485028_110485654_110485837_110489444_110489509_110489710_110489786_110491232_110491341_110492069_110492178_110493210_110493283_110495341_110495468_110501667_110501785_110503120_110503283_110503382_110503482_110503846_110503994_110504147_110504265_110506414_110506607_110507934_110508222_110511933
transcript_54835.nic	chr13	+	3812	33	ISM	ENSG00000134871.19	ENST00000360467.7	6446	48	-562	28246	-536	856	5prime_fragment	FALSE	canonical	3	200	junction_17	34.6615330734231	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACATTAAAGGAGAGAAAGG	NA	False	NA	NA	False	AATGAA	-2	NA	110306721	110484963	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_110307529_110307859_110307948_110308068_110308124_110357471_110357553_110424733_110424869_110424952_110424998_110428466_110428584_110429884_110429957_110430400_110430437_110430544_110430608_110432324_110432361_110434400_110434443_110436268_110436368_110438001_110438038_110438617_110438669_110439788_110439834_110445828_110445883_110446797_110446865_110449678_110449790_110450304_110450455_110457342_110457436_110458770_110458935_110462113_110462187_110462277_110462385_110465404_110465607_110466002_110466063_110467039_110467097_110469216_110469325_110472928_110473151_110478002_110478165_110480219_110480391_110482515_110482660_110484904
transcript_54844.nic	chr13	+	2310	23	ISM	ENSG00000134871.19	ENST00000360467.7	6446	48	-380	51051	-354	-291	5prime_fragment	FALSE	canonical	3	200	junction_17	19.5929655111385	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGATTCCAGAACAATCAC	110306893	False	NA	NA	False	NA	NA	NA	110306903	110462158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_110307529_110307859_110307948_110308068_110308124_110357471_110357553_110424733_110424869_110424952_110424998_110428466_110428584_110429884_110429957_110430400_110430437_110430544_110430608_110432324_110432361_110434400_110434443_110436268_110436368_110438001_110438038_110438617_110438669_110439788_110439834_110445828_110445883_110446797_110446865_110449678_110449790_110450304_110450455_110457342_110457436_110458770_110458935_110462113
transcript_54846.nic	chr13	+	2887	22	ISM	ENSG00000134871.19	ENST00000360467.7	6446	48	-165	53438	-139	0	5prime_fragment	FALSE	canonical	3	200	junction_17	17.7886304742569	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACATTATTTATTTATCGA	110307107	False	NA	NA	False	NA	NA	NA	110307118	110459771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_110307529_110307859_110307948_110308068_110308124_110357471_110357553_110424733_110424869_110424952_110424998_110428466_110428584_110429884_110429957_110430400_110430437_110430544_110430608_110432324_110432361_110434400_110434443_110436268_110436368_110438001_110438038_110438617_110438669_110439788_110439834_110445828_110445883_110446797_110446865_110449678_110449790_110450304_110450455_110457342_110457436_110458770
transcript_54849.known	chr13	+	3108	18	FSM	ENSG00000134871.19	ENST00000650540.1	3108	18	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_17	19.7424594689302	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTCTGTGGCTTTCAAT	110296437	True	NA	NA	False	AATAAA	-31	NA	110307356	110448678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_110307529_110307859_110307948_110308068_110308124_110357471_110357553_110424733_110424869_110424952_110424998_110428466_110428584_110429884_110429957_110430400_110430437_110430544_110430608_110432324_110432361_110434400_110434443_110436268_110436368_110438001_110438038_110438617_110438669_110439788_110439834_110445828_110445883_110446797
transcript_5485.known	chr1	+	6048	14	FSM	ENSG00000204138.13	ENST00000373839.8	6048	14	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	13.2173456053805	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATACTATTCTGGTGTGAG	28363505	True	NA	12	True	ATTAAA	-25	NA	28369739	28500364	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28369826_28407409_28407464_28459084_28459259_28460211_28460293_28465684_28465850_28466381_28466769_28473553_28474152_28476106_28476292_28480450_28480605_28489169_28489226_28490950_28491013_28491649_28491788_28493014_28493092_28496533
transcript_54855.nic	chr13	+	2317	3	ISM	ENSG00000134871.19	ENST00000480771.5	585	4	-19	18533	-10	-18533	5prime_fragment	FALSE	canonical	3	245	junction_2	6.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAGTTACTAAACATAGCT	110296328	True	NA	NA	False	AAAACA	-21	NA	110307247	110310016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_110307529_110307859_110307948_110308068
transcript_54857.known	chr13	-	1507	2	FSM	ENSG00000139832.5	ENST00000267328.5	1507	2	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	0	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATTGAGACTGAACTGAC	-110559605	True	NA	-1	True	ATTAAA	-22	NA	110561722	110523065	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_110524198_110561347
transcript_54862.nnic	chr13	+	2274	11	NNC	ENSG00000213995.12	novel	2515	10	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_10	43.551808228821	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTATTGTATTTTTTTC	110613614	True	NA	10	True	ATTAAA	-23	NA	110615562	110639996	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr13_+_110615648_110622215_110622367_110624233_110624280_110625189_110625279_110627438_110627548_110634544_110634596_110634671_110634777_110635467_110635589_110637128_110637250_110638377_110638546_110638768
transcript_54868.known	chr13	+	1191	10	FSM	ENSG00000213995.12	ENST00000679389.1	1191	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	46.5951833466841	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCACCTTGGACGGGGGAG	110613611	True	NA	NA	False	AGTAAA	-2	NA	110615559	110638551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_110615648_110622215_110622367_110624233_110624280_110625189_110625279_110627438_110627548_110634544_110634596_110634671_110634777_110635467_110635589_110637128_110637250_110638241
transcript_54869.known	chr13	+	2515	10	FSM	ENSG00000213995.12	ENST00000680254.1	2515	10	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_3	9.54521404218424	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTATTGTATTTTTTTC	110613596	True	NA	10	True	ATTAAA	-23	NA	110615544	110639996	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_110615648_110622215_110622367_110624233_110624280_110625189_110625279_110627438_110627548_110634544_110634596_110634671_110634777_110635467_110635589_110637128_110637250_110638377
transcript_54874.known	chr13	+	2692	10	FSM	ENSG00000213995.12	ENST00000309957.3	2692	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	55.9174877126894	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGAGTATTGTATTTTT	110613679	True	NA	7	True	ATTAAA	-20	NA	110615627	110639993	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_110615775_110622215_110622367_110624233_110624280_110625189_110625279_110627438_110627548_110634544_110634596_110634671_110634777_110635467_110635589_110637128_110637250_110638241
transcript_54875.known	chr13	+	2559	10	FSM	ENSG00000213995.12	ENST00000680505.1	2559	10	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	38.2925709198837	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTATTGTATTTTTTTC	110613679	True	NA	10	True	ATTAAA	-23	NA	110615627	110639996	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_110615775_110622215_110622367_110624233_110624280_110625189_110625279_110627438_110627548_110634544_110634596_110634671_110634777_110635467_110635589_110637128_110637250_110638377
transcript_54878.nnic	chr13	+	2459	9	NIC	ENSG00000213995.12	novel	2515	10	NA	NA	-65	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_8	45.6172938697595	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTATTGTATTTTTTTC	NA	False	NA	10	True	ATTAAA	-23	NA	110615479	110639996	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_110615648_110622215_110622367_110624233_110624280_110625189_110625279_110627438_110627548_110634544_110634596_110634671_110634777_110635467_110635589_110638377
transcript_54883.nic	chr13	+	2656	9	NIC	ENSG00000213995.12	novel	2515	10	NA	NA	-65	0	intron_retention	FALSE	canonical	3	127	junction_3	9.77800465330223	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTATTGTATTTTTTTC	NA	False	NA	10	True	ATTAAA	-23	NA	110615479	110639996	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_110615648_110622215_110622367_110624233_110624280_110625189_110625279_110627438_110627548_110634544_110634777_110635467_110635589_110637128_110637250_110638377
transcript_54888.known	chr13	+	2377	9	FSM	ENSG00000213995.12	ENST00000470164.2	2377	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	42.5776863509515	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGAGTATTGTATTTTT	110613642	True	NA	7	True	ATTAAA	-20	NA	110615590	110639993	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_110615648_110622215_110622367_110624233_110624280_110627438_110627548_110634544_110634596_110634671_110634777_110635467_110635589_110637128_110637250_110638377
transcript_54911.known	chr13	+	2216	7	FSM	ENSG00000213995.12	ENST00000424185.7	2216	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	51.9326486903951	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGAGTATTGTATTTTT	110613606	True	NA	7	True	ATTAAA	-20	NA	110615554	110639993	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_110615648_110627438_110627548_110634544_110634596_110634671_110634777_110635467_110635589_110637128_110637250_110638377
transcript_54924.nnic	chr13	+	2155	6	NIC	ENSG00000213995.12	novel	2515	10	NA	NA	-35	0	combination_of_known_splicesites	FALSE	canonical	3	31	junction_1	48.8696224663134	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTATTGTATTTTTTTC	110613561	True	NA	10	True	ATTAAA	-23	NA	110615509	110639996	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_110615648_110634544_110634596_110634671_110634777_110635467_110635589_110637128_110637250_110638377
transcript_54933.nnic	chr13	+	2231	5	NIC	ENSG00000213995.12	novel	2515	10	NA	NA	-35	0	intron_retention	FALSE	canonical	3	31	junction_1	52.2804934942278	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTATTGTATTTTTTTC	110613561	True	NA	10	True	ATTAAA	-23	NA	110615509	110639996	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_110615648_110634544_110634777_110635467_110635589_110637128_110637250_110638377
transcript_54942.nic	chr13	-	2020	16	NIC	ENSG00000134905.17	novel	1838	15	NA	NA	-47	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_2	96.1016591370247	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCCCACTGGCGTCTG	-110706147	False	NA	-9	True	ATTAAA	-14	NA	110706180	110641416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_110641609_110642314_110642522_110644064_110644183_110644384_110644484_110645966_110646091_110647100_110647240_110651033_110651101_110663450_110663519_110667339_110667474_110676973_110677104_110683050_110683135_110687720_110687827_110687946_110688019_110701437_110701556_110705520_110705572_110705869
transcript_54950.known	chr13	-	1838	15	FSM	ENSG00000134905.17	ENST00000257347.9	1838	15	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_6	36.5971589172756	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCCCACTGGCGTCTG	-110701149	True	NA	-9	True	ATTAAA	-14	NA	110706116	110641416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_110641609_110642314_110642522_110644384_110644484_110645966_110646091_110647100_110647240_110651033_110651101_110663450_110663519_110667339_110667474_110676973_110677104_110683050_110683135_110687720_110687827_110687946_110688019_110701437_110701556_110705520_110705572_110705869
transcript_54961.nic	chr13	-	2912	14	NIC	ENSG00000134905.17	novel	1838	15	NA	NA	-47	0	intron_retention	FALSE	canonical	3	247	junction_5	35.6038359744378	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCCCACTGGCGTCTG	-110706147	False	NA	-9	True	ATTAAA	-14	NA	110706180	110641416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_110641609_110642314_110642522_110644384_110644484_110645966_110647240_110651033_110651101_110663450_110663519_110667339_110667474_110676973_110677104_110683050_110683135_110687720_110687827_110687946_110688019_110701437_110701556_110705520_110705572_110705869
transcript_54970.nnic	chr13	-	2670	12	NIC	ENSG00000134905.17	novel	1838	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	16	junction_9	90.4257149120502	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCCCACTGGCGTCTG	-110701149	True	NA	-9	True	ATTAAA	-14	NA	110706116	110641416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_110641609_110642314_110642522_110644384_110644484_110645966_110647240_110651033_110651101_110663450_110663519_110667339_110667474_110676973_110677104_110683050_110683135_110701437_110701556_110705520_110705572_110705869
transcript_54978.known	chr13	+	4697	2	FSM	ENSG00000153487.13	ENST00000333219.9	4697	2	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTTCCTCTTATTATAT	110711864	True	NA	NA	False	AATAAA	-19	NA	110713699	110723339	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_110714286_110719228
transcript_54980.known	chr13	+	2870	2	FSM	ENSG00000153487.13	ENST00000375774.3	2870	2	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCGTGCTTATGTGCGT	110714968	False	NA	22	True	AATAAA	-14	NA	110714981	110721071	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_110716009_110719228
transcript_5499.known	chr1	+	918	7	FSM	ENSG00000204138.13	ENST00000632202.1	918	7	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_3	37.3749767744261	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCACAAGCCTTGCAAAGAC	28369591	True	NA	NA	False	NA	NA	NA	28369608	28466584	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28369826_28407409_28407464_28457831_28457856_28459084_28459259_28460211_28460293_28465684_28465850_28466381
transcript_55.known	ERCC-00150	+	727	1	FSM	ERCC-00150A	DQ883659	727	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00150_+_0_700
transcript_55001.nic	chr13	-	2612	7	NIC	ENSG00000088448.14	novel	2495	6	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_4	308.683584849528	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTCCCTGGGGTTTCTC	-110897650	True	NA	-1	True	AATAAA	-16	NA	110915092	110878539	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_110880113_110883697_110883794_110893027_110893264_110894108_110894203_110906032_110906125_110910617_110910771_110914724
transcript_55011.known	chr13	-	2495	6	FSM	ENSG00000088448.14	ENST00000267339.6	2495	6	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_3	286.883530374262	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTCCCTGGGGTTTCTC	-110897627	True	NA	-1	True	AATAAA	-16	NA	110915069	110878539	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_110880113_110883697_110883794_110893027_110893264_110906032_110906125_110910617_110910771_110914724
transcript_55020.nnic	chr13	-	2281	5	NIC	ENSG00000088448.14	novel	2495	6	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	288.623781937664	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTCCCTGGGGTTTCTC	-110897649	True	NA	-1	True	AATAAA	-16	NA	110915091	110878539	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_110880113_110883697_110883794_110906032_110906125_110910617_110910771_110914724
transcript_55024.known	chr13	-	1193	5	FSM	ENSG00000088448.14	ENST00000310847.8	1193	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	137.812372448921	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTTTAATTT	-110897564	True	NA	0	True	ATTAAA	-24	NA	110915006	110892691	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_110893264_110894108_110894203_110906032_110906125_110910617_110910771_110914724
transcript_55025.known	chr13	-	997	5	FSM	ENSG00000088448.14	ENST00000465753.1	997	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	152.736701548776	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCGCACCTTCGAGATGAG	-110897595	True	NA	31	True	NA	NA	NA	110915037	110892956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_110893264_110900529_110900662_110906032_110906125_110910617_110910771_110914724
transcript_55027.nnic	chr13	-	1250	5	NNC	ENSG00000088448.14	novel	1193	5	NA	NA	-32	-8	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_2	154.548333863552	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGAATTTTTTTTTTTT	-110897659	True	NA	-8	True	ATTAAA	-16	NA	110915101	110892699	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr13_-_110893264_110903475_110903540_110906032_110906125_110910617_110910771_110914724
transcript_55032.known	chr13	-	535	4	FSM	ENSG00000088448.14	ENST00000460846.1	535	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	174.997777763668	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTTTGGTTTCCATTTC	-110914793	False	NA	NA	False	AATAAA	-18	NA	110914803	110905022	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_110905234_110906032_110906125_110910617_110910771_110914724
transcript_55035.nic	chr13	+	2675	21	NIC	ENSG00000102606.19	novel	5233	21	NA	NA	0	-2265	combination_of_known_junctions	FALSE	canonical	3	88	junction_3	38.6534280497862	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAATGCATACCTGTGG	111149391	True	NA	26	True	TATAAA	-34	NA	111153646	111303466	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_111153722_111153904_111153992_111205288_111205374_111209871_111210003_111217678_111217881_111233204_111233294_111243871_111243967_111244198_111244295_111267547_111267671_111273813_111273953_111274730_111274791_111275531_111275679_111277586_111277674_111280271_111280351_111280537_111280678_111283138_111283364_111286146_111286241_111288353_111288444_111300747_111300848_111301477_111301533_111302990
transcript_55036.nic	chr13	+	4941	21	NIC	ENSG00000102606.19	novel	5233	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_3	38.6534280497862	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAATGTGTCGCTTCGTCT	111149391	True	NA	22	True	ATTAAA	-22	NA	111153646	111305732	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_111153722_111153904_111153992_111205288_111205374_111209871_111210003_111217678_111217881_111233204_111233294_111243871_111243967_111244198_111244295_111267547_111267671_111273813_111273953_111274730_111274791_111275531_111275679_111277586_111277674_111280271_111280351_111280537_111280678_111283138_111283364_111286146_111286241_111288353_111288444_111300747_111300848_111301477_111301533_111302990
transcript_5504.known	chr1	+	1421	6	FSM	ENSG00000204138.13	ENST00000463428.5	1421	6	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	17.7538728169377	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATGAAACTGAGGCAGAT	28363504	True	NA	NA	False	AAAACA	-21	NA	28369738	28467241	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28369826_28407409_28407464_28459084_28459259_28460211_28460293_28465684_28465850_28466381
transcript_55041.nic	chr13	+	4810	20	NIC	ENSG00000102606.19	novel	5032	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_3	45.9613230150787	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAATGTGTCGCTTCGTCT	111149391	True	NA	22	True	ATTAAA	-22	NA	111153646	111305732	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_111153722_111153904_111153992_111205288_111205374_111217678_111217881_111233204_111233294_111243871_111243967_111244198_111244295_111267547_111267671_111273813_111273953_111274730_111274791_111275531_111275679_111277586_111277674_111280271_111280351_111280537_111280678_111283138_111283364_111286146_111286241_111288353_111288444_111300747_111300848_111301477_111301533_111302990
transcript_55055.nic	chr13	+	2273	2	ISM	ENSG00000102606.19	ENST00000491775.5	581	6	0	61698	0	2140	5prime_fragment	FALSE	canonical	3	114	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAATTGAATGTTAAAAAC	111149391	True	NA	NA	False	NA	NA	NA	111153646	111156102	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_111153722_111153904
transcript_55056.known	chr13	+	5032	20	FSM	ENSG00000102606.19	ENST00000375736.8	5032	20	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	38.3904708859848	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAATGTGTCGCTTCGTC	111149482	True	NA	21	True	ATTAAA	-21	NA	111153737	111305731	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_111153992_111205288_111205374_111209871_111210003_111217678_111217881_111233204_111233294_111243871_111243967_111244198_111244295_111267547_111267671_111273813_111273953_111274730_111274791_111275531_111275679_111277586_111277674_111280271_111280351_111280537_111280678_111283138_111283364_111286146_111286241_111288353_111288444_111300747_111300848_111301477_111301533_111302990
transcript_55057.known	chr13	-	4111	23	FSM	ENSG00000126216.15	ENST00000649778.1	4111	23	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_9	62.5512847441241	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAAAAGCAATTATCTTT	NA	False	NA	-27	True	CATAAA	-35	NA	112588205	112485032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_112486152_112489580_112489698_112499044_112499186_112504031_112504164_112504625_112504715_112516439_112516576_112518974_112519044_112519885_112520022_112521662_112521865_112522319_112522510_112526941_112527051_112527373_112527485_112545698_112545866_112547619_112547753_112548107_112548177_112554056_112554183_112554886_112555006_112556051_112556225_112558195_112558414_112559321_112559400_112565110_112565179_112569151_112569260_112587904
transcript_55060.known	chr13	-	3879	22	FSM	ENSG00000126216.15	ENST00000261965.8	3879	22	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	21.6082414780389	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCATTCGTTATTTCTTG	-112584005	True	NA	-5	True	ATTAAA	-16	NA	112588153	112485010	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_112486152_112489580_112489698_112499044_112499186_112504031_112504164_112504625_112504715_112516439_112516576_112518974_112519044_112519885_112520022_112522319_112522510_112526941_112527051_112527373_112527485_112545698_112545866_112547619_112547753_112548107_112548177_112554056_112554183_112554886_112555006_112556051_112556225_112558195_112558414_112559321_112559400_112565110_112565179_112569151_112569260_112587904
transcript_55067.known	chr13	-	2723	21	FSM	ENSG00000126216.15	ENST00000375669.7	2723	21	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	46.0593095910045	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAAATCTCCTGCCCGTT	-112583977	True	NA	NA	False	AATAAA	-25	NA	112588125	112498806	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_112498937_112499044_112499186_112504031_112504164_112504625_112504715_112516439_112516576_112518974_112519044_112519885_112520022_112522319_112522510_112526941_112527051_112527373_112527485_112545698_112545866_112547619_112547753_112548107_112548177_112554056_112554183_112554886_112555006_112556051_112556225_112558195_112558414_112559321_112559400_112565110_112565179_112569151_112569260_112587904
transcript_55077.known	chr13	-	2461	10	FSM	ENSG00000126216.15	ENST00000464139.5	2461	10	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_1	22.4999314127898	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAGAACTCTTCATGTGC	-112583987	True	NA	-3	True	AATAAA	-21	NA	112588135	112546481	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_112547753_112548107_112548177_112554056_112554183_112554886_112555006_112556051_112556225_112558195_112558414_112559321_112559400_112565110_112565179_112569151_112569260_112587904
transcript_55086.nic	chr13	+	5265	31	NIC	ENSG00000126217.21	novel	3648	30	NA	NA	-50	0	combination_of_known_junctions	TRUE	canonical	3	30	junction_1	10.171037311897	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGCCTTTGTCTGTCAA	112892786	True	NA	7	True	AATAAA	-17	NA	112894327	113098548	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_112894432_112902198_112902372_113014762_113014847_113024643_113024759_113045270_113045362_113060592_113060713_113064303_113064421_113064935_113065086_113066045_113066171_113070058_113070174_113074443_113074564_113074997_113075190_113075965_113076158_113077051_113077212_113078362_113078437_113078665_113078740_113081212_113081280_113082426_113082543_113083997_113084068_113084891_113084985_113085085_113085179_113086123_113086250_113087234_113087457_113087706_113087800_113088326_113088406_113088561_113088629_113089609_113089729_113094513_113094636_113096370_113096484_113096549_113096654_113096773
transcript_55090.known	chr13	+	3648	30	FSM	ENSG00000126217.21	ENST00000375608.7	3648	30	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	10.2718112821185	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCCTCGGCGCCGGAGACC	112892836	True	NA	NA	False	NA	NA	NA	112894377	113096861	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_112894432_112902198_112902372_113014762_113014847_113024643_113024759_113045270_113045362_113060592_113060713_113064303_113064421_113064935_113065086_113066045_113066171_113070058_113070174_113074443_113074564_113074997_113075190_113075965_113076158_113077051_113077212_113078362_113078437_113078665_113078740_113081212_113081280_113082426_113082543_113083997_113084068_113084891_113084985_113085085_113085179_113086123_113086250_113087234_113087457_113087706_113087800_113088326_113088406_113088561_113088629_113089609_113089729_113094513_113094636_113096370_113096484_113096549
transcript_55097.known	chr13	+	1450	8	FSM	ENSG00000126218.12	ENST00000409306.5	1450	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	5.35666664550076	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCAAGGCCAAGAGCCATG	113122685	True	NA	-50	True	GGGGCT	-2	NA	113122813	113149462	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_113122926_113129451_113129613_113138456_113138482_113139356_113139471_113140918_113141051_113143850_113144096_113147378_113147493_113148915
transcript_55105.known	chr13	+	4037	20	FSM	ENSG00000139842.15	ENST00000375441.7	4037	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	288.295881405644	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGACACATTCTTCATAA	NA	False	NA	38	True	AATAAA	-15	NA	113208192	113265072	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_113208608_113209972_113210089_113218944_113219049_113227975_113228046_113229445_113229520_113233176_113233340_113233896_113233987_113235062_113235146_113236822_113236891_113239432_113239552_113242967_113243161_113244409_113244515_113244948_113245060_113245151_113245238_113245955_113246064_113253081_113253196_113254692_113254799_113254952_113255126_113260606_113260760_113263486
transcript_55112.known	chr13	+	5821	20	FSM	ENSG00000139842.15	ENST00000375440.9	5821	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	239.04170407711	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGACCCGTTGCCCCT	113196474	True	NA	6	True	AATATA	-17	NA	113209612	113267108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_113209776_113209972_113210089_113218944_113219049_113227975_113228046_113229445_113229520_113233176_113233340_113233896_113233987_113235062_113235146_113236822_113236891_113239432_113239552_113242967_113243161_113244409_113244515_113244948_113245060_113245151_113245238_113245955_113246064_113253081_113253196_113254692_113254799_113254952_113255126_113260606_113260760_113263486
transcript_55140.known	chr13	-	1668	15	FSM	ENSG00000126226.22	ENST00000375459.5	1668	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	300.465455245555	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTGTTGGTTAAAAAAAAA	-113208094	False	NA	-20	True	AATAAA	-20	NA	113208106	113177611	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_113178009_113178173_113178288_113178965_113179090_113179916_113180043_113180157_113180232_113181129_113181231_113184345_113184488_113185484_113185561_113190871_113190976_113195070_113195126_113196180_113196223_113197177_113197244_113198190_113198265_113200426_113200517_113208023
transcript_55142.known	chr13	-	1654	15	FSM	ENSG00000126226.22	ENST00000375477.5	1654	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	249.586688960214	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGTTGGTTAAAAAAAAAT	-113200427	True	NA	-19	True	AATAAA	-21	NA	113208666	113177610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_113178009_113178173_113178288_113178965_113179090_113179916_113180043_113180157_113180232_113181129_113181231_113184345_113184488_113185484_113185561_113190871_113190976_113195070_113195126_113196180_113196223_113197177_113197244_113198190_113198265_113200426_113200517_113208598
transcript_55145.known	chr13	-	1671	15	FSM	ENSG00000126226.22	ENST00000375479.6	1671	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	246.403445924089	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGTTGGTTAAAAAAAAAT	-113200476	True	NA	-19	True	AATAAA	-21	NA	113208715	113177610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_113177977_113178173_113178288_113178965_113179090_113179916_113180043_113180157_113180232_113181129_113181231_113184345_113184488_113185484_113185561_113190871_113190976_113195070_113195126_113196180_113196223_113197177_113197244_113198190_113198265_113200426_113200517_113208598
transcript_5515.known	chr1	+	2686	14	FSM	ENSG00000180198.17	ENST00000649185.1	2686	14	0	0	0	0	multi-exon	FALSE	canonical	2	59	junction_3	291.949902486934	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTAGAGTTTTATAAAAT	28462191	True	NA	83	True	NA	NA	NA	28505979	28538968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28506085_28508127_28508161_28508829_28508906_28516724_28516868_28529857_28529940_28530522_28530616_28531802_28531991_28532170_28532351_28535049_28535147_28535257_28535381_28535870_28536027_28536261_28536382_28536746_28536900_28537831
transcript_55156.known	chr13	-	2372	14	FSM	ENSG00000126226.22	ENST00000375457.2	2372	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	287.386777293795	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCTTTGTTGGTTAAAA	-113200411	True	NA	-25	True	AATAAA	-15	NA	113208650	113177616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_113178288_113178965_113179090_113179916_113180043_113180157_113180232_113181129_113181231_113184345_113184488_113185484_113185561_113190871_113190976_113195070_113195126_113196180_113196223_113197177_113197244_113198190_113198265_113200426_113200517_113208023
transcript_55157.known	chr13	-	1897	14	FSM	ENSG00000126226.22	ENST00000337344.9	1897	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	220.585047801544	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATGGCTCACTCTAGCC	-113200430	True	NA	56	True	AATACA	-22	NA	113208669	113177535	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_113178288_113178965_113179090_113179916_113180043_113180157_113180232_113181129_113181231_113184345_113184488_113185484_113185561_113190871_113190976_113195070_113195126_113196180_113196223_113197177_113197244_113198190_113198265_113200426_113200517_113208598
transcript_55177.known	chr13	+	1111	6	FSM	ENSG00000139842.15	ENST00000488558.2	1111	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	519.11231925278	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATGAGCTTTAAACCCAA	113196461	True	NA	35	True	CATAAA	-17	NA	113209599	113230212	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_113209776_113209972_113210089_113218944_113219049_113227975_113228046_113229445_113229520_113229641
transcript_55193.known	chr13	+	2701	9	FSM	ENSG00000185896.11	ENST00000332556.5	2701	9	0	0	0	0	multi-exon	FALSE	canonical	3	644	junction_4	45.3484770968111	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCATGGAATACTATGCAG	113274516	True	NA	37	True	ATTAAA	-21	NA	113297238	113323672	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_113297496_113306484_113306607_113309642_113309863_113310708_113310868_113319468_113319657_113320344_113320471_113321403_113321471_113321556_113321728_113322281
transcript_55200.nnic	chr13	+	2422	8	NIC	ENSG00000185896.11	novel	2701	9	NA	NA	-90	-5	combination_of_known_splicesites	FALSE	canonical	3	39	junction_1	232.531060027582	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGGTGGGCCTTGTCCTT	113297107	False	NA	24	True	AATAAA	-15	NA	113297148	113323425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_113297496_113309642_113309863_113310708_113310868_113319468_113319657_113320344_113320471_113321403_113321471_113321556_113321728_113322281
transcript_5521.known	chr1	+	2844	13	FSM	ENSG00000180198.17	ENST00000373833.10	2844	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	255.961083739089	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTGAGACAGA	28462268	True	NA	132	True	AATAGA	-37	NA	28506056	28539300	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28506085_28508127_28508161_28508829_28508902_28516724_28516868_28529857_28529940_28531802_28531991_28532170_28532351_28535049_28535147_28535257_28535381_28535870_28536027_28536261_28536382_28536746_28536900_28537831
transcript_55214.known	chr13	-	1415	8	FSM	ENSG00000139835.14	ENST00000375431.9	1415	8	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_1	27.5206786817121	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTGAGTGGTCACTGAG	-113358056	True	NA	-1	True	NA	NA	NA	113364130	113324162	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_113324578_113325660_113325847_113325918_113326092_113344862_113344960_113350848_113350974_113355322_113355482_113363761_113363911_113364019
transcript_55221.nnic	chr13	-	1306	7	NIC	ENSG00000139835.14	novel	1415	8	NA	NA	-32	0	combination_of_known_splicesites	FALSE	canonical	3	138	junction_5	146.125136631435	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTGAGTGGTCACTGAG	-113358106	True	NA	-1	True	NA	NA	NA	113364180	113324162	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_113324578_113325660_113325847_113325918_113326092_113344862_113344960_113350848_113350974_113363761_113363911_113364019
transcript_55226.known	chr13	-	1834	7	FSM	ENSG00000139835.14	ENST00000375430.8	1834	7	0	0	0	0	multi-exon	FALSE	canonical	3	505	junction_5	16.8267313786394	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTCTA	-113358074	True	NA	NA	False	NA	NA	NA	113364148	113324844	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_113325847_113325918_113326092_113344862_113344960_113350848_113350974_113355322_113355482_113363761_113363911_113364019
transcript_5524.known	chr1	+	2715	12	FSM	ENSG00000180198.17	ENST00000398958.6	2715	12	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	205.472525359684	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGTTTGGGTATTTCT	28505926	True	NA	28	True	NA	NA	NA	28505942	28539196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28506085_28508127_28508161_28508829_28508906_28529857_28529940_28531802_28531991_28532170_28532351_28535049_28535147_28535257_28535381_28535870_28536027_28536261_28536382_28536746_28536900_28537831
transcript_55253.nic	chr13	-	1918	3	NIC	ENSG00000139835.14	novel	877	3	NA	NA	-32	940	combination_of_known_junctions	FALSE	canonical	3	68	junction_1	235.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAATTGGTTCTGTTTGTGT	-113358106	True	NA	-3	True	ATTAAA	-25	NA	113364180	113358676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_113360285_113363761_113363911_113364019
transcript_55254.known	chr13	-	877	3	FSM	ENSG00000139835.14	ENST00000476439.1	877	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	9.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGACCTTTCTCTTAAATACA	-113358057	True	NA	NA	False	NA	NA	NA	113364131	113359616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_113360285_113363761_113363911_113364071
transcript_55255.nic	chr13	-	1994	2	ISM	ENSG00000139835.14	ENST00000476439.1	877	3	-16	-940	1	940	intron_retention	FALSE	canonical	3	68	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAATTGGTTCTGTTTGTGT	-113358073	True	NA	-3	True	ATTAAA	-25	NA	113364147	113358676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_-_113360285_113363761
transcript_55256.known	chr13	-	1341	7	FSM	ENSG00000153531.15	ENST00000375418.8	1993	7	-36	688	-36	-688	multi-exon	FALSE	canonical	0	0	junction_6	3.04138126514911	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATATTTTCCGTCCTCCA	NA	False	NA	NA	False	CATAAA	-20	NA	113453524	113422632	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_113422980_113424216_113424350_113425051_113425180_113428951_113429093_113433741_113433868_113444424_113444590_113453223
transcript_55257.nnic	chr13	-	2054	7	Fusion	ENSG00000150401.15_ENSG00000153531.15	novel	1877	7	NA	NA	-36	0	multi-exon	TRUE	canonical	2	2	junction_4	2.44948974278318	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCTGTGCTTGGCCGCTTG	NA	False	NA	40	True	AATAAA	-22	NA	113490987	113421939	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr13_-_113422980_113424216_113424350_113425051_113425180_113428951_113429093_113433741_113433868_113444424_113444590_113490666
transcript_55264.nic	chr13	-	3394	8	NIC	ENSG00000150401.15	novel	3164	8	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_7	28.1519202230487	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTTTCCTTTCGATTCT	-113488924	True	NA	-1	True	ATTAAA	-16	NA	113490687	113455818	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_113458109_113459311_113459409_113461053_113461137_113462739_113462892_113474123_113474255_113480574_113480744_113483839_113484057_113490432
transcript_55265.known	chr13	-	3164	8	FSM	ENSG00000150401.15	ENST00000375403.6	3164	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	23.4015523643459	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTTTCCTTTCGATTCT	-113488928	True	NA	-1	True	ATTAAA	-16	NA	113490691	113455818	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_113458109_113459311_113459409_113461053_113461137_113462739_113462892_113474123_113474255_113480574_113480744_113483839_113484057_113490666
transcript_55267.nnic	chr13	-	3413	8	NIC	ENSG00000150401.15	novel	3164	8	NA	NA	-89	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_7	24.2646967878043	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTTTCCTTTCGATTCT	-113490760	False	NA	-1	True	ATTAAA	-16	NA	113490800	113455818	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_113458109_113459311_113459409_113461053_113461137_113462739_113462892_113474123_113474255_113480574_113480744_113483839_113484197_113490666
transcript_55276.known	chr13	-	3032	7	FSM	ENSG00000150401.15	ENST00000478244.6	3032	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	26.7581763205193	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTTTCCTTTCGATTCT	-113488948	True	NA	-1	True	ATTAAA	-16	NA	113490711	113455818	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_113458109_113459311_113459409_113461053_113461137_113474123_113474255_113480574_113480744_113483839_113484057_113490666
transcript_55277.nnic	chr13	-	3437	7	NIC	ENSG00000150401.15	novel	3032	7	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_6	27.6269795670826	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTTTCCTTTCGATTCT	-113490936	False	NA	-1	True	ATTAAA	-16	NA	113490976	113455818	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_113458109_113459311_113459409_113461053_113461137_113474123_113474255_113480574_113480744_113483839_113484197_113490666
transcript_55290.known	chr13	+	3058	13	FSM	ENSG00000150403.18	ENST00000434316.7	3058	13	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_11	63.0923045140126	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTATTGAGCTTAT	113488970	True	NA	3	True	ATTAAA	-16	NA	113491020	113550229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_113491274_113495501_113496026_113498341_113498522_113499957_113500150_113501751_113501881_113503495_113503589_113510237_113510425_113520615_113520734_113534044_113534241_113539356_113539508_113547299_113547380_113548302_113548453_113549424
transcript_55295.nnic	chr13	+	3285	12	NIC	ENSG00000150403.18	novel	3058	13	NA	NA	-307	0	combination_of_known_splicesites	FALSE	canonical	3	50	junction_10	80.6105831495002	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTATTGAGCTTAT	NA	False	NA	3	True	ATTAAA	-16	NA	113490713	113550229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_113491274_113495501_113496026_113498341_113498522_113499957_113500150_113501751_113501881_113503495_113503589_113510237_113510425_113520615_113520734_113534044_113534241_113539356_113539508_113548302_113548453_113549424
transcript_55301.nic	chr13	+	3272	12	NIC	ENSG00000150403.18	novel	3058	13	NA	NA	-307	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_5	97.3763254612258	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTATTGAGCTTAT	NA	False	NA	3	True	ATTAAA	-16	NA	113490713	113550229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_113491274_113495501_113496026_113498341_113498522_113499957_113500150_113501751_113501881_113510237_113510425_113520615_113520734_113534044_113534241_113539356_113539508_113547299_113547380_113548302_113548453_113549424
transcript_55304.nnic	chr13	+	3134	11	NIC	ENSG00000150403.18	novel	3058	13	NA	NA	-307	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_9	95.5152343869814	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTATTGAGCTTAT	NA	False	NA	3	True	ATTAAA	-16	NA	113490713	113550229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_113491274_113495501_113496026_113498341_113498522_113499957_113500150_113501751_113501881_113503495_113503589_113510237_113510425_113520615_113520734_113534044_113534241_113548302_113548453_113549424
transcript_55307.nnic	chr13	+	3018	11	NIC	ENSG00000150403.18	novel	3058	13	NA	NA	-307	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_8	97.6127040912196	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTATTGAGCTTAT	NA	False	NA	3	True	ATTAAA	-16	NA	113490713	113550229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_113491274_113495501_113496026_113498341_113498522_113499957_113500150_113501751_113501881_113503495_113503589_113510237_113510425_113520615_113520734_113547299_113547380_113548302_113548453_113549424
transcript_55319.nnic	chr13	+	2938	10	NIC	ENSG00000150403.18	novel	3058	13	NA	NA	-307	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_8	97.0795778958914	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTATTGAGCTTAT	NA	False	NA	3	True	ATTAAA	-16	NA	113490713	113550229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_113491274_113495501_113496026_113498341_113498522_113499957_113500150_113501751_113501881_113503495_113503589_113510237_113510425_113520615_113520734_113548302_113548453_113549424
transcript_55331.known	chr13	+	2843	9	FSM	ENSG00000150403.18	ENST00000474393.5	2843	9	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_8	42.6079511359089	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGCTTCTGCTTACCGAG	113489045	True	NA	4	True	AATAAA	-15	NA	113491095	113535286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_113491274_113495501_113496026_113498341_113498522_113499957_113500150_113501751_113501881_113503495_113503589_113510237_113510425_113520615_113520734_113534044
transcript_55351.known	chr13	+	2639	12	FSM	ENSG00000198176.13	ENST00000375370.10	2639	12	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_11	50.8946408063749	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTTCTCTAATTCAG	113578872	True	NA	12	True	AATAAA	-24	NA	113584752	113641473	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_113584889_113585773_113585850_113610995_113611063_113623179_113623287_113631622_113631745_113633119_113633286_113633889_113634034_113634533_113634603_113635976_113636129_113636533_113636701_113637817_113637897_113640119
transcript_55354.nnic	chr13	+	2538	11	NNC	ENSG00000198176.13	novel	804	7	NA	NA	-147	0	at_least_one_novel_splicesite	FALSE	canonical	3	95	junction_4	177.944963401609	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTTCTCTAATTCAG	113584456	True	NA	12	True	AATAAA	-24	NA	113584573	113641473	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr13_+_113584731_113585773_113585850_113610995_113611063_113623179_113623287_113633119_113633286_113633889_113634034_113634533_113634603_113635976_113636129_113636533_113636701_113637817_113637897_113640119
transcript_55355.nic	chr13	+	2284	11	NIC	ENSG00000198176.13	novel	2639	12	NA	NA	-19	-284	combination_of_known_junctions	FALSE	canonical	3	95	junction_4	137.925487129827	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAACTCAAAATTTGT	113578821	True	NA	24	True	ATTAAA	-21	NA	113584701	113641189	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_113584889_113585773_113585850_113610995_113611063_113623179_113623287_113633119_113633286_113633889_113634034_113634533_113634603_113635976_113636129_113636533_113636701_113637817_113637897_113640119
transcript_55356.nic	chr13	+	2568	11	NIC	ENSG00000198176.13	novel	2639	12	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	95	junction_4	137.925487129827	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTTCTCTAATTCAG	113578821	True	NA	12	True	AATAAA	-24	NA	113584701	113641473	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_113584889_113585773_113585850_113610995_113611063_113623179_113623287_113633119_113633286_113633889_113634034_113634533_113634603_113635976_113636129_113636533_113636701_113637817_113637897_113640119
transcript_55361.nnic	chr13	+	2486	10	NIC	ENSG00000198176.13	novel	2639	12	NA	NA	-19	-3	combination_of_known_splicesites	FALSE	canonical	3	95	junction_4	182.43666244061	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTGTGTTTCTCTAATT	113578821	True	NA	9	True	AATAAA	-21	NA	113584701	113641470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_113584889_113585773_113585850_113610995_113611063_113623179_113623287_113633119_113633286_113633889_113634034_113634533_113634603_113635976_113636129_113636533_113636701_113640119
transcript_55364.nnic	chr13	+	2461	10	NIC	ENSG00000198176.13	novel	2639	12	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_3	169.152134022732	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTTCTCTAATTCAG	113578821	True	NA	12	True	AATAAA	-24	NA	113584701	113641473	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_113584889_113585773_113585850_113610995_113611063_113633119_113633286_113633889_113634034_113634533_113634603_113635976_113636129_113636533_113636701_113637817_113637897_113640119
transcript_55370.known	chr13	+	447	3	FSM	ENSG00000198176.13	ENST00000464794.5	447	3	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	191	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCGCAGCGAATCCTGCA	113578852	True	NA	26	True	AATAAA	-34	NA	113584732	113586180	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_113584889_113585773_113585850_113585965
transcript_55376.known	chr13	-	2508	15	FSM	ENSG00000183087.15	ENST00000327773.7	2508	15	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_14	15.2080805588909	312	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGCGTGGCCGTCATCTG	-113860923	True	NA	-3	True	AATAAA	-23	NA	113864076	113820548	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_113821019_113821957_113822187_113823374_113823551_113826995_113827165_113828546_113828712_113832298_113832489_113832633_113832753_113834550_113834673_113835512_113835636_113838068_113838192_113839727_113839851_113846526_113846590_113848025_113848051_113863574_113863742_113863832
transcript_55393.known	chr13	+	6117	9	FSM	ENSG00000184497.13	ENST00000375353.5	6117	9	0	0	0	0	multi-exon	TRUE	canonical	2	15	junction_7	7.45716936913733	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCCGTATTACGTGAAGT	113758817	True	NA	NA	False	TTTAAA	-16	NA	113759225	113816995	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_113759316_113766114_113766258_113769097_113769161_113795147_113795238_113799338_113799420_113800826_113800913_113801652_113801813_113804884_113805029_113811735
transcript_55396.known	chr13	+	694	5	FSM	ENSG00000184497.13	ENST00000488362.5	694	5	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_3	7.98044484975618	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCACGTGTCCAGTTCTGT	113758831	True	NA	9	True	ATTAAA	-17	NA	113759239	113799660	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_113759316_113766114_113766258_113769097_113769161_113795147_113795238_113799338
transcript_55400.known	chr13	-	4203	24	FSM	ENSG00000185989.11	ENST00000334062.8	4203	24	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_7	9.08997245561593	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGCCTTGGTTTTCCAG	-114130352	True	NA	1	True	ATTAAA	-23	NA	114132623	113977782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_-_113979423_113981674_113981859_113992484_113992589_113996530_113996740_113999584_113999668_114000825_114000933_114007532_114007607_114009386_114009465_114011170_114011249_114013141_114013249_114015208_114015333_114016196_114016272_114017236_114017352_114018103_114018253_114018762_114018920_114021403_114021509_114024278_114024356_114027388_114027462_114027846_114027928_114029810_114029888_114040999_114041095_114052051_114052156_114073719_114073838_114132434
transcript_55402.nnic	chr13	-	4118	23	NIC	ENSG00000185989.11	novel	4203	24	NA	NA	-33	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_22	23.3291220127183	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGCCTTGGTTTTCCAG	NA	False	NA	1	True	ATTAAA	-23	NA	114132656	113977782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_-_113979423_113981674_113981859_113992484_113992589_113996530_113996740_113999584_113999668_114000825_114000933_114007532_114007607_114009386_114009465_114011170_114011249_114013141_114013249_114015208_114015333_114016196_114016272_114017236_114017352_114018103_114018253_114018762_114018920_114021403_114021509_114024278_114024356_114027388_114027462_114027846_114027928_114029810_114029888_114040999_114041095_114052051_114052156_114132434
transcript_55412.known	chr13	+	2034	19	FSM	ENSG00000130177.16	ENST00000252457.9	2034	19	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	92.3315282615376	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTATGTCTTTTTTTTTCT	114234995	False	NA	11	True	AATAAA	-15	NA	114235060	114272675	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_114235133_114236644_114236700_114236801_114236897_114238989_114239029_114239349_114239491_114242120_114242281_114243256_114243349_114243855_114243990_114244889_114244970_114245999_114246050_114246930_114247005_114250548_114250675_114257077_114257231_114259334_114259399_114261886_114261949_114262878_114263015_114265149_114265241_114272183_114272482_114272563
transcript_55416.known	chr13	+	2331	18	FSM	ENSG00000130177.16	ENST00000356221.8	2331	18	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_6	36.9713252769435	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTGATTTACAGAAAAAT	114230586	True	NA	8	True	AATAAA	-18	NA	114234896	114272723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_114235133_114236644_114236700_114236798_114236897_114238989_114239029_114239349_114239491_114242120_114242281_114243256_114243349_114243855_114243990_114244889_114244970_114245999_114246050_114246930_114247005_114250548_114250675_114257077_114257231_114259334_114259399_114261886_114261949_114262878_114263015_114265149_114265241_114272183
transcript_55417.nnic	chr13	+	2186	18	NNC	ENSG00000130177.16	novel	2211	19	NA	NA	3	0	intron_retention	FALSE	canonical	3	23	junction_17	88.6553530605884	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTATGTCTTTTTTTTTCT	114230589	True	NA	11	True	AATAAA	-15	NA	114234899	114272675	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr13_+_114235133_114236644_114236700_114236798_114236897_114238989_114239029_114239349_114239491_114242120_114242281_114243256_114243349_114243855_114243990_114244889_114244970_114245999_114246050_114246930_114247005_114250548_114250675_114257077_114257231_114259334_114259399_114261886_114261949_114262878_114263015_114265149_114265241_114272277
transcript_55419.known	chr13	+	2058	18	FSM	ENSG00000130177.16	ENST00000628084.2	2058	18	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_12	99.5425175629397	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTATGTCTTTTTTTTTCT	114230576	True	NA	11	True	AATAAA	-15	NA	114234886	114272675	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_114235133_114236644_114236700_114236798_114236897_114238989_114239029_114239349_114239491_114242120_114242281_114243256_114243349_114243855_114243990_114244889_114244970_114245999_114246050_114246930_114247005_114250548_114250675_114259334_114259399_114261886_114261949_114262878_114263015_114265149_114265241_114272183_114272482_114272563
transcript_55421.nnic	chr13	+	2175	18	NIC	ENSG00000130177.16	novel	2211	19	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	3	47	junction_1	92.7056957298808	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTATGTCTTTTTTTTTCT	NA	False	NA	11	True	AATAAA	-15	NA	114234867	114272675	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_114235133_114236798_114236897_114238989_114239029_114239349_114239491_114242120_114242281_114243256_114243349_114243855_114243990_114244889_114244970_114245999_114246050_114246930_114247005_114250548_114250675_114257077_114257231_114259334_114259399_114261886_114261949_114262878_114263015_114265149_114265241_114272183_114272482_114272563
transcript_55431.nnic	chr13	+	2305	17	NIC	ENSG00000130177.16	novel	2331	18	NA	NA	-19	0	intron_retention	FALSE	canonical	3	47	junction_1	85.273983979582	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTGATTTACAGAAAAAT	NA	False	NA	8	True	AATAAA	-18	NA	114234867	114272723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_114235133_114236798_114236897_114238989_114239029_114239349_114239491_114242120_114242281_114243256_114243349_114243855_114243990_114244889_114244970_114245999_114246050_114246930_114247005_114250548_114250675_114257077_114257231_114259334_114259399_114261886_114261949_114262878_114263015_114265149_114265241_114272183
transcript_55446.known	chr13	+	2370	10	FSM	ENSG00000169062.15	ENST00000375299.8	2370	10	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_1	107.021054810909	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTTGAATCTGTGTCA	114277726	True	NA	8	True	AATAAA	-25	NA	114281600	114305817	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_114281847_114282020_114282128_114282836_114282944_114286301_114286401_114286518_114286630_114291488_114291545_114291633_114291793_114298839_114299001_114301730_114302026_114304788
transcript_55447.nic	chr13	+	2243	9	ISM	ENSG00000169062.15	ENST00000375299.8	2370	10	292	9	-32	0	3prime_fragment	FALSE	canonical	3	283	junction_2	84.6153059440194	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGAAATATTCTTTGAA	114278018	False	NA	-1	True	AATAAA	-16	NA	114281892	114305808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_114282128_114282836_114282944_114286301_114286401_114286518_114286630_114291488_114291545_114291633_114291793_114298839_114299001_114301730_114302026_114304788
transcript_5545.known	chr1	+	2201	3	FSM	ENSG00000242125.3	ENST00000413987.1	2201	3	0	0	0	0	multi-exon	FALSE	canonical	3	735	junction_1	131	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGGTTTTAGTATGTTT	28462191	True	NA	25	True	AGTAAA	-17	NA	28505979	28510892	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28506085_28508127_28508161_28508829
transcript_55455.nic	chr13	+	853	7	ISM	ENSG00000169062.15	ENST00000375299.8	2370	10	-16	14073	-16	0	5prime_fragment	FALSE	canonical	3	220	junction_1	121.621909575902	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGACAGATAAACAGAAGAA	114281572	False	NA	-13	True	AAAAAG	-35	NA	114281584	114291744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_114281847_114282020_114282128_114282836_114282944_114286301_114286401_114286518_114286630_114291488_114291545_114291633
transcript_5546.known	chr1	+	185	2	FSM	ENSG00000242125.3	ENST00000447507.1	185	2	0	0	0	0	multi-exon	FALSE	canonical	3	735	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCATTTAATCATTCTCAG	28462254	True	NA	NA	False	NA	NA	NA	28506042	28508270	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28506085_28508127
transcript_55467.nic	chr13	+	735	6	ISM	ENSG00000169062.15	ENST00000480362.5	965	8	-116	13205	1	0	5prime_fragment	FALSE	canonical	3	215	junction_3	145.378127653372	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGACAGATAAACAGAAGAA	114277729	True	NA	-13	True	AAAAAG	-35	NA	114281603	114291744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_114281847_114282020_114282128_114282836_114282944_114286518_114286630_114291488_114291545_114291633
transcript_5547.known	chr1	+	204	1	FSM	ENSG00000200087.1	ENST00000363217.1	204	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGTATACTAGATTTTAAG	28508548	False	NA	5	True	NA	NA	NA	28508558	28508762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28508600_28508800
transcript_55471.nic	chr13	+	719	6	ISM	ENSG00000169062.15	ENST00000375299.8	2370	10	292	14073	-32	0	internal_fragment	FALSE	canonical	3	283	junction_2	101.706243662816	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGACAGATAAACAGAAGAA	114278018	False	NA	-13	True	AAAAAG	-35	NA	114281892	114291744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_114282128_114282836_114282944_114286301_114286401_114286518_114286630_114291488_114291545_114291633
transcript_55474.nic	chr13	+	1849	5	ISM	ENSG00000169062.15	ENST00000375299.8	2370	10	-191	18200	-191	0	5prime_fragment	FALSE	canonical	3	220	junction_1	112.255011024007	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCCACATTGTTTATCAT	NA	False	NA	2	True	AATAAA	-15	NA	114281409	114287617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_114281847_114282020_114282128_114282836_114282944_114286301_114286401_114286518
transcript_5548.known	chr1	+	2424	10	FSM	ENSG00000180198.17	ENST00000373832.5	2424	10	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_1	74.2978656456979	1616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGGCCACTTGTTTTC	28518125	False	NA	98	True	AATAAA	-14	NA	28518135	28538983	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28518309_28529857_28529940_28531802_28531991_28532170_28532351_28535049_28535147_28535257_28535381_28535870_28536027_28536261_28536382_28536746_28536900_28537831
transcript_55482.nic	chr13	+	620	5	ISM	ENSG00000169062.15	ENST00000480362.5	965	8	173	13205	-32	0	internal_fragment	FALSE	canonical	3	215	junction_2	130.635705302953	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGACAGATAAACAGAAGAA	114278018	False	NA	-13	True	AAAAAG	-35	NA	114281892	114291744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr13_+_114282128_114282836_114282944_114286518_114286630_114291488_114291545_114291633
transcript_5549.known	chr1	+	1132	10	FSM	ENSG00000180098.9	ENST00000480930.5	1132	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	84.5897872013249	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTTTGGAGATCATGAA	28549324	True	NA	19	True	NA	NA	NA	28553098	28577744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28553138_28553639_28553738_28560632_28560733_28561112_28561261_28561345_28561399_28564702_28564835_28567293_28567414_28571175_28571339_28571866_28571901_28577499
transcript_55492.nnic	chr13	+	481	4	NIC	ENSG00000169062.15	novel	937	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	58	junction_1	212.697489929294	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGACAGATAAACAGAAGAA	114281811	True	NA	-13	True	AAAAAG	-35	NA	114281924	114291744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr13_+_114282128_114286518_114286630_114291488_114291545_114291633
transcript_55498.known	chr13	+	494	2	FSM	ENSG00000169062.15	ENST00000492270.1	494	2	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTCCGTTCCGTCAAAGA	114277728	True	NA	NA	False	AATAAA	-16	NA	114281602	114282270	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_114281847_114282020
transcript_55499.known	chr13	+	615	3	FSM	ENSG00000198824.7	ENST00000478022.3	615	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	10.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAAGGTGTTCAGTCTTTC	114310279	True	NA	56	True	AGTAAA	-19	NA	114314530	114322441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_114314644_114321109_114321233_114322062
transcript_55500.known	chr13	+	3799	3	FSM	ENSG00000198824.7	ENST00000361283.4	3799	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	11.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACATCTTCATGTGTGTT	114310251	True	NA	8	True	ATTAAA	-20	NA	114314502	114327322	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr13_+_114314644_114321109_114321233_114323787
transcript_55505.known	chr14	-	4737	10	FSM	ENSG00000136319.12	ENST00000258821.8	4737	10	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_9	14.8656535113996	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGCTTTTTCATTTTCTT	-20303605	True	NA	0	True	TATAAA	-34	NA	20305951	20286226	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_20289747_20291982_20292128_20295311_20295527_20295707_20295855_20296389_20296447_20298796_20298889_20299297_20299449_20300606_20300819_20301832_20301966_20305886
transcript_55507.known	chr14	-	682	3	FSM	ENSG00000136319.12	ENST00000557379.1	682	3	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_2	16.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATACAGATGGCAGCAAGAA	-20303607	True	NA	NA	False	AAGAAA	-40	NA	20305953	20300336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_20300819_20301832_20301966_20305886
transcript_55508.known	chr14	-	1294	8	FSM	ENSG00000100814.18	ENST00000556854.5	1294	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	191.321291901069	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATGGAGATGGAGATTTTC	-20326791	True	NA	NA	False	AATACA	-18	NA	20333303	20311703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_20311753_20313467_20313802_20315484_20315619_20316226_20316561_20325538_20325654_20326715_20326794_20329173_20329374_20333253
transcript_55510.known	chr14	-	1686	8	FSM	ENSG00000100814.18	ENST00000437553.6	1686	8	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	198.004122818342	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTTCTATGTTCATCT	-20326800	True	NA	-8	True	AATAAA	-22	NA	20333312	20311367	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_20311753_20313467_20313802_20316226_20316561_20317793_20317975_20325538_20325654_20326715_20326794_20329173_20329374_20333253
transcript_55511.known	chr14	-	1613	7	FSM	ENSG00000100814.18	ENST00000398160.6	1613	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_6	160.309769578221	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTTCTATGTTCATCT	-20332986	False	NA	-8	True	AATAAA	-22	NA	20333010	20311367	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_20311753_20313467_20313802_20316226_20316561_20325538_20325654_20326715_20326794_20329173_20329374_20332843
transcript_55512.known	chr14	-	1470	7	FSM	ENSG00000100814.18	ENST00000358932.9	1470	7	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_6	102.256893274841	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACTGTTTCTATGTTCAT	-20326767	True	NA	-10	True	AATAAA	-20	NA	20333279	20311369	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_20311753_20313467_20313802_20316226_20316561_20325538_20325654_20326715_20326794_20329173_20329374_20333253
transcript_55515.known	chr14	-	1305	6	FSM	ENSG00000100814.18	ENST00000353689.8	1305	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	172.350805045988	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTTCTATGTTCATCT	-20326800	True	NA	-8	True	AATAAA	-22	NA	20333312	20311367	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_20311753_20313467_20313802_20316226_20316561_20325538_20325654_20326715_20326794_20333253
transcript_55519.known	chr14	+	1827	16	FSM	ENSG00000129484.14	ENST00000429687.8	1827	16	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_1	31.7851118187955	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGGCTTCTTCGGGCTT	20336364	True	NA	14	True	AATAAA	-16	NA	20343634	20357904	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_20343688_20344931_20345088_20345393_20345465_20346862_20346914_20350525_20350623_20351046_20351123_20352244_20352348_20354084_20354248_20354808_20354948_20355751_20355816_20355896_20356032_20356306_20356435_20356589_20356690_20357050_20357150_20357395_20357521_20357637
transcript_55522.known	chr14	+	1886	16	FSM	ENSG00000129484.14	ENST00000250416.9	1886	16	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	87.3574012637484	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGGCTTCTTCGGGCTT	20336344	True	NA	14	True	AATAAA	-16	NA	20343614	20357904	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_20343688_20344931_20345127_20345393_20345465_20346862_20346914_20350525_20350623_20351046_20351123_20352244_20352348_20354084_20354248_20354808_20354948_20355751_20355816_20355896_20356032_20356306_20356435_20356589_20356690_20357050_20357150_20357395_20357521_20357637
transcript_55537.nic	chr14	+	609	7	ISM	ENSG00000129484.14	ENST00000429687.8	1827	16	-84	5639	-64	-1843	5prime_fragment	FALSE	canonical	3	280	junction_1	33.0592901718513	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATTGGGAAGATCGAGAAA	20336280	True	NA	NA	False	NA	NA	NA	20343550	20352265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_20343688_20344931_20345088_20345393_20345465_20346862_20346914_20350525_20350623_20351046_20351123_20352244
transcript_55538.nic	chr14	+	624	7	ISM	ENSG00000129484.14	ENST00000429687.8	1827	16	-16	5556	4	-1760	5prime_fragment	FALSE	canonical	3	280	junction_1	33.0592901718513	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCTCACTATACTTTTC	20336348	True	NA	NA	False	NA	NA	NA	20343618	20352348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_20343688_20344931_20345088_20345393_20345465_20346862_20346914_20350525_20350623_20351046_20351123_20352244
transcript_5554.known	chr1	+	1799	9	FSM	ENSG00000180098.9	ENST00000373830.4	1799	9	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	28.5689954321114	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTCTTTTTATTCTTCTT	28549310	True	NA	14	True	AATATA	-7	NA	28553084	28578545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28553138_28553639_28553738_28560632_28560733_28561345_28561399_28564702_28564835_28567293_28567414_28571175_28571339_28571866_28571901_28577499
transcript_55552.known	chr14	-	1976	11	FSM	ENSG00000092094.11	ENST00000206542.9	1976	11	0	0	0	0	multi-exon	TRUE	canonical	3	192	junction_8	12.6984250992003	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTCTACTCCGTATACT	-20454778	False	3755	NA	False	NA	NA	NA	20454812	20446400	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_20447280_20447421_20447521_20447614_20447691_20447903_20447995_20448105_20448172_20448732_20448812_20448963_20449014_20449170_20449267_20451973_20452150_20452328_20452449_20454568
transcript_55574.known	chr14	-	1011	2	FSM	ENSG00000092094.11	ENST00000556439.1	1011	2	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCACTCCATCTCAATTT	-20455055	False	NA	NA	False	NA	NA	NA	20455089	20451958	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_20452449_20454568
transcript_55577.known	chr14	-	1696	7	FSM	ENSG00000165782.11	ENST00000398020.6	1696	7	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_6	78.622869163848	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTTTTCAGTTGTTAACT	-20457710	True	NA	-16	True	AATAAA	-17	NA	20461465	20457857	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_20458703_20459205_20459297_20459387_20459441_20459627_20459734_20460191_20460299_20460654_20460846_20461162
transcript_55578.known	chr14	-	1821	7	FSM	ENSG00000165782.11	ENST00000250489.9	1821	7	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_6	80.3258986877831	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCTCAAATAAAAAATCTTG	-20457679	True	NA	NA	False	TTTAAA	-11	NA	20461434	20457680	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_20458703_20459205_20459297_20459387_20459441_20459627_20459734_20460191_20460299_20460654_20460846_20461183
transcript_55583.known	chr14	+	899	5	FSM	ENSG00000100823.12	ENST00000553681.5	899	5	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	983.469750424486	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTTTGGACTTATATGA	20392809	True	NA	-32	True	NA	NA	NA	20455200	20457342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_20455241_20455577_20455704_20455913_20456102_20456667_20456861_20456990
transcript_55587.known	chr14	+	1453	5	FSM	ENSG00000100823.12	ENST00000216714.8	1453	5	0	0	0	0	multi-exon	FALSE	canonical	3	1465	junction_1	411.084845257034	986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGCTGTCTTCGTGTCT	20392834	True	NA	15	True	AATAAA	-15	NA	20455225	20457767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_20455395_20455577_20455704_20455913_20456102_20456667_20456861_20456990
transcript_55588.known	chr14	+	952	5	FSM	ENSG00000100823.12	ENST00000555839.5	952	5	0	0	0	0	multi-exon	FALSE	canonical	2	80	junction_4	876.731821881697	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCGATCCAAGAATGTTG	20392847	True	NA	-8	True	NA	NA	NA	20455238	20457366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_20455395_20455577_20455704_20455913_20456102_20456667_20456861_20457077
transcript_5559.known	chr1	+	1610	8	FSM	ENSG00000180098.9	ENST00000491577.5	1610	8	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	24.7608974154074	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTACAACACTGCTGC	28549331	True	NA	39	True	NA	NA	NA	28553105	28577764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28553138_28553639_28553738_28560632_28561399_28564702_28564835_28567293_28567414_28571175_28571339_28571866_28571901_28577499
transcript_55590.known	chr14	+	1387	5	FSM	ENSG00000100823.12	ENST00000398030.8	1387	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1017.92887153278	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGCTGTCTTCGTGTCT	20392834	True	NA	15	True	AATAAA	-15	NA	20455225	20457767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_20455329_20455577_20455704_20455913_20456102_20456667_20456861_20456990
transcript_55592.known	chr14	+	740	5	FSM	ENSG00000100823.12	ENST00000557150.5	740	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1127.27134599439	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGACTGGAGTACCGGCAG	20392873	True	NA	NA	False	NA	NA	NA	20455264	20457089	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_20455329_20455577_20455774_20455913_20456102_20456667_20456861_20456990
transcript_55594.known	chr14	+	640	5	FSM	ENSG00000100823.12	ENST00000557592.5	640	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	1125.73006866655	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTTCGCAAGTTCCTG	20392856	True	NA	NA	False	NA	NA	NA	20455247	20457119	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_20455339_20455734_20455774_20455913_20456102_20456667_20456861_20456990
transcript_55597.known	chr14	+	773	5	FSM	ENSG00000100823.12	ENST00000556054.5	773	5	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	981.344071923808	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCCGAGGTCTGGTACGA	20392855	True	NA	NA	False	NA	NA	NA	20455246	20457074	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_20455429_20455577_20455704_20455913_20456102_20456667_20456861_20456990
transcript_55599.known	chr14	+	898	4	FSM	ENSG00000100823.12	ENST00000555306.5	898	4	0	0	0	0	multi-exon	FALSE	canonical	3	1465	junction_1	433.672687634349	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATCAGGAAGGCCGGGTG	20392834	True	NA	NA	False	NA	NA	NA	20455225	20457002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_20455395_20455577_20456102_20456667_20456861_20456990
transcript_55601.known	chr14	+	831	4	FSM	ENSG00000100823.12	ENST00000557365.1	831	4	0	0	0	0	multi-exon	FALSE	canonical	2	37	junction_1	1073.96461766671	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTTTAGGCACCTCTAC	20392865	True	NA	-72	True	NA	NA	NA	20455256	20457302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_20455395_20455913_20456102_20456667_20456861_20456990
transcript_55602.known	chr14	+	654	4	FSM	ENSG00000100823.12	ENST00000554813.5	654	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	1088.30459380124	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGCCTGGCTTCCCGAAA	20392823	True	NA	NA	False	NA	NA	NA	20455214	20457139	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_20455339_20455913_20456102_20456667_20456861_20456990
transcript_55609.known	chr14	+	1803	3	FSM	ENSG00000100823.12	ENST00000557159.5	1803	3	0	0	0	0	multi-exon	FALSE	canonical	3	2017	junction_1	255	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCACATGAAAATAAAGAGCC	20392848	True	NA	-14	True	TTTAAA	-43	NA	20455239	20457738	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_20456102_20456667_20456861_20456990
transcript_55610.known	chr14	+	1603	4	FSM	ENSG00000100823.12	ENST00000553555.5	1603	4	0	0	0	0	multi-exon	FALSE	canonical	3	2017	junction_2	215.388021951083	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATCCACATGAAAATAAAG	20392834	True	NA	-18	True	TTTAAA	-39	NA	20455225	20457734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_20455704_20455913_20456102_20456667_20456861_20456990
transcript_55611.known	chr14	+	1477	6	FSM	ENSG00000198805.12	ENST00000361505.10	1477	6	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_3	31.6417445789577	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTTTTTGTGTAACT	20465415	True	NA	51	True	AATAAA	-17	NA	20469405	20477089	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_20469536_20472307_20472478_20474471_20474576_20474772_20474949_20475061_20475253_20476383
transcript_55616.known	chr14	+	1222	2	FSM	ENSG00000214274.10	ENST00000336811.10	1222	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTCTTCTCACTGATT	NA	False	NA	15	True	AATAAA	-27	NA	20684176	20694186	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_20684759_20693546
transcript_55617.known	chr14	+	2061	2	FSM	ENSG00000258818.4	ENST00000555835.3	2061	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	20684199	True	NA	NA	False	ATTAAA	-22	NA	20684559	20701216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_20684759_20699354
transcript_55618.known	chr14	-	914	2	FSM	ENSG00000129538.14	ENST00000397967.5	914	2	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAGTGGCTTGAGAAAAT	-20802728	True	NA	NA	False	ATTAAA	-22	NA	20802844	20801227	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_20802094_20802796
transcript_55619.known	chr14	-	878	3	FSM	ENSG00000129538.14	ENST00000340900.3	878	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTGTCTAGGTACTGTT	-20802739	True	NA	11	True	AATAAA	-31	NA	20802855	20801345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_20802094_20802248_20802320_20802796
transcript_5562.known	chr1	-	524	6	FSM	ENSG00000197989.15	ENST00000475441.6	524	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	26.2404268257969	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTGTGTTTGTATTTTT	-28578172	False	NA	98	True	AATAAA	-27	NA	28581623	28578538	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_28578681_28579532_28579588_28579911_28579982_28580559_28580647_28581093_28581230_28581589
transcript_55621.known	chr14	+	1529	14	FSM	ENSG00000165792.18	ENST00000557550.6	1529	14	0	0	0	0	multi-exon	FALSE	canonical	2	135	junction_3	165.864812708044	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTTTGAAGAATGGAAG	20979702	True	NA	-3	True	AATAAA	-5	NA	20990002	20997016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992091_20992206_20992540_20992623_20993117_20993192_20993968_20994064_20994542_20994614_20994793_20994902_20995164_20995234_20995900_20995952_20996208_20996293_20996526_20996712_20996784
transcript_55623.known	chr14	+	1539	14	FSM	ENSG00000165792.18	ENST00000339374.11	1539	14	0	0	0	0	multi-exon	FALSE	canonical	2	406	junction_8	103.749356595995	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGATTTTGTGATTCTTAA	20979679	True	NA	16	True	AATAAA	-24	NA	20989979	20997035	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992123_20992206_20992540_20992623_20993117_20993192_20993968_20994064_20994542_20994614_20994793_20994902_20995164_20995234_20995900_20995952_20996208_20996293_20996526_20996712_20996784
transcript_55624.known	chr14	+	1500	14	FSM	ENSG00000165792.18	ENST00000556670.6	1500	14	0	0	0	0	multi-exon	FALSE	canonical	2	43	junction_13	182.973564876971	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAGTGGATTTTGTGATT	20979686	True	NA	11	True	AATAAA	-19	NA	20989986	20997030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992123_20992206_20992540_20992623_20993117_20993192_20993968_20994064_20994542_20994614_20994793_20994902_20995164_20995234_20995900_20995952_20996208_20996293_20996526_20996712_20996811
transcript_55627.known	chr14	+	1605	13	FSM	ENSG00000165792.18	ENST00000555533.6	1605	13	0	0	0	0	multi-exon	FALSE	canonical	2	135	junction_3	168.139244543193	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATAAATTTTTGAAGAA	20979693	True	NA	-9	True	NA	NA	NA	20989993	20997010	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992091_20992206_20992540_20992623_20993117_20993192_20993968_20994064_20994542_20994614_20994793_20994902_20995164_20995234_20995900_20995952_20996208_20996293_20996526
transcript_5563.known	chr1	-	682	6	FSM	ENSG00000197989.15	ENST00000483436.5	682	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	34.1666504065002	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTATATTTGTGTTTG	-28578367	False	NA	91	True	AATAAA	-20	NA	28581818	28578545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_28578681_28579532_28579588_28579941_28579982_28580559_28580647_28581093_28581230_28581589
transcript_55630.known	chr14	+	1586	13	FSM	ENSG00000165792.18	ENST00000382985.8	1586	13	0	0	0	0	multi-exon	FALSE	canonical	2	406	junction_8	96.4515926370437	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAATAAATTTTTGAAGA	20979679	True	NA	-10	True	NA	NA	NA	20989979	20997009	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992123_20992206_20992540_20992623_20993117_20993192_20993968_20994064_20994542_20994614_20994793_20994902_20995164_20995234_20995900_20995952_20996208_20996293_20996526
transcript_55656.known	chr14	+	5893	24	FSM	ENSG00000165801.10	ENST00000298694.9	5893	24	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_20	56.5058171554111	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGCAGAGTGGCTCCTC	21067552	True	NA	19	True	AATAAA	-25	NA	21070303	21090248	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_21070400_21073044_21073243_21073931_21075181_21075331_21075500_21075644_21075766_21076359_21076457_21076562_21076644_21076773_21076891_21078176_21078273_21078372_21078489_21078883_21079011_21080659_21080783_21080872_21081017_21081508_21082120_21082243_21082479_21082830_21082918_21083834_21084051_21084752_21084924_21085688_21085867_21087000_21087106_21087319_21087464_21087967_21088099_21088829_21088877_21089013
transcript_55665.nic	chr14	+	5724	23	NIC	ENSG00000165801.10	novel	5893	24	NA	NA	-647	0	combination_of_known_junctions	FALSE	canonical	3	157	junction_20	38.1321105007272	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCCTCTAAGGAGCTAG	21069456	True	NA	18	True	ATTAAA	-15	NA	21069625	21089545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_21070400_21073044_21073243_21073931_21075181_21075331_21075500_21075644_21075766_21076359_21076457_21076562_21076644_21076773_21076891_21078176_21078273_21078372_21078489_21078883_21079011_21080659_21080783_21080872_21081017_21081508_21082120_21082243_21082479_21082830_21082918_21083834_21084051_21084752_21084924_21085688_21085867_21087000_21087106_21087967_21088099_21088829_21088877_21089013
transcript_5567.known	chr1	-	1104	5	FSM	ENSG00000197989.15	ENST00000470977.6	1104	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	29.3204280323463	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTTTGTATTTTTT	NA	False	NA	99	True	AATAAA	-28	NA	28581878	28578537	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_28578681_28579532_28579982_28580559_28580647_28581093_28581230_28581589
transcript_55672.nnic	chr14	+	3814	22	NIC	ENSG00000165801.10	novel	5893	24	NA	NA	-40	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	75.3025040764343	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCCTCTAAGGAGCTAG	21067481	True	NA	18	True	ATTAAA	-15	NA	21070232	21089545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_21070400_21075331_21075500_21075644_21075766_21076359_21076457_21076562_21076644_21076773_21076891_21078176_21078273_21078372_21078489_21078883_21079011_21080659_21080783_21080872_21081017_21081508_21082120_21082243_21082479_21082830_21082918_21083834_21084051_21084752_21084924_21085688_21085867_21087000_21087106_21087319_21087464_21087967_21088099_21088829_21088877_21089013
transcript_55676.nnic	chr14	+	3670	21	NIC	ENSG00000165801.10	novel	5893	24	NA	NA	-40	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	63.3869860460331	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCCTCTAAGGAGCTAG	21067481	True	NA	18	True	ATTAAA	-15	NA	21070232	21089545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_21070400_21075331_21075500_21075644_21075766_21076359_21076457_21076562_21076644_21076773_21076891_21078176_21078273_21078372_21078489_21078883_21079011_21080659_21080783_21080872_21081017_21081508_21082120_21082243_21082479_21082830_21082918_21083834_21084051_21084752_21084924_21085688_21085867_21087000_21087106_21087967_21088099_21088829_21088877_21089013
transcript_5568.known	chr1	-	1644	4	FSM	ENSG00000197989.15	ENST00000461448.6	1644	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	16.539514973407	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTTTGTATTTTTT	-28578406	True	NA	99	True	AATAAA	-28	NA	28581857	28578537	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_28578681_28579532_28580647_28581110_28581230_28581589
transcript_55698.known	chr14	-	2079	17	FSM	ENSG00000165795.25	ENST00000397853.7	2079	17	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_16	35.2878785845792	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCGTTATTATTCTTTGT	-21024383	True	NA	-14	True	AATAAA	-17	NA	21025094	21016771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21024029_21024097_21025028
transcript_5570.known	chr1	+	450	2	FSM	ENSG00000180098.9	ENST00000411406.3	450	2	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCGGGTGTGGTGGCAG	28549322	True	NA	NA	False	AATACA	-5	NA	28553096	28554048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28553138_28553639
transcript_55700.known	chr14	-	2122	17	FSM	ENSG00000165795.25	ENST00000298687.9	2122	17	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_16	34.5377963251855	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTTTGTCTAGGTGTG	NA	False	NA	-5	True	AATAAA	-26	NA	21025776	21016762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21024029_21024097_21025676
transcript_55704.known	chr14	-	2022	16	FSM	ENSG00000165795.25	ENST00000397851.6	2022	16	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_15	36.8395922284104	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACCGTTATTATTCTTTG	-21024527	False	43	-15	True	AATAAA	-16	NA	21025105	21016772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21025028
transcript_55705.known	chr14	-	2054	16	FSM	ENSG00000165795.25	ENST00000397858.5	2054	16	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_15	38.5247972090704	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTCTTTGTCTAGGTGT	NA	False	NA	-6	True	AATAAA	-25	NA	21025776	21016763	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21025676
transcript_55711.known	chr14	-	1980	15	FSM	ENSG00000165795.25	ENST00000554143.5	1980	15	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_14	42.857202380911	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACCGTTATTATTCTTTG	-21024527	False	43	-15	True	AATAAA	-16	NA	21025105	21016772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21023240_21023322_21025028
transcript_5572.known	chr1	-	1359	6	FSM	ENSG00000120656.14	ENST00000263974.4	1359	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	154.175743876915	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAAGACAGGGTACCTTTG	-28639248	True	NA	-8	True	AATAAA	-13	NA	28643005	28603100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_28603575_28605371_28605461_28613246_28613362_28617952_28618031_28621913_28622166_28642654
transcript_5573.known	chr1	-	1335	6	FSM	ENSG00000120656.14	ENST00000373824.9	1335	6	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_2	24.071559982685	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATGTTATATGCCTAAAAA	-28639310	True	NA	NA	False	NA	NA	NA	28643067	28602849	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_28603575_28605371_28605461_28613246_28613362_28617952_28618031_28621913_28622166_28642991
transcript_55735.nnic	chr14	-	2811	5	NNC	ENSG00000165804.16	novel	3055	5	NA	NA	-301	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	139.98303468635	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGTCTGTCTGCCTA	-21093513	False	NA	-27	True	AATAAA	-21	NA	21094129	21090076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_-_21091141_21091410_21091543_21091864_21093291_21093585_21093675_21094029
transcript_55736.nnic	chr14	-	2846	5	NNC	ENSG00000165804.16	novel	3055	5	NA	NA	180	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	137.989809406347	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGTCTGTCTGCCTA	-21093652	False	NA	-27	True	AATAAA	-21	NA	21094268	21090076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_-_21091141_21091410_21091543_21091864_21093291_21093585_21093675_21094133
transcript_55737.nic	chr14	-	2893	5	NIC	ENSG00000165804.16	novel	3055	5	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_4	135.604894823159	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGTCTGTCTGCCTA	-21094480	False	NA	-27	True	AATAAA	-21	NA	21094572	21090076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_21091141_21091410_21091543_21091864_21093291_21093585_21093675_21094390
transcript_55738.nic	chr14	-	2863	5	NIC	ENSG00000165804.16	novel	3055	5	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_4	136.399001096049	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGTCTGTCTGCCTA	-21094479	False	NA	-27	True	AATAAA	-21	NA	21094571	21090076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_21091141_21091410_21091543_21091864_21093291_21093585_21093675_21094419
transcript_55741.known	chr14	-	3055	5	FSM	ENSG00000165804.16	ENST00000360947.8	3055	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_4	103.670149995068	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGTCTGTCTGCCTA	-21098563	False	NA	-27	True	AATAAA	-21	NA	21098655	21090076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21091141_21091410_21091543_21091864_21093291_21093585_21093675_21098311
transcript_55742.known	chr14	-	2908	5	FSM	ENSG00000165804.16	ENST00000421093.6	2908	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	138.786481690401	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACAGGGCCCTGTGTCTGT	-21098922	False	NA	-34	True	AATAAA	-14	NA	21099014	21090083	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21091141_21091410_21091543_21091864_21093291_21093585_21093675_21098810
transcript_55743.nic	chr14	-	3354	5	NIC	ENSG00000165804.16	novel	3055	5	NA	NA	-166	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_4	121.091907244043	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGTCTGTCTGCCTA	-21103653	False	NA	-27	True	AATAAA	-21	NA	21103745	21090076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_21091141_21091410_21091543_21091864_21093291_21093585_21093675_21103102
transcript_55744.known	chr14	-	2918	5	FSM	ENSG00000165804.16	ENST00000451119.6	2918	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	138.388041390866	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGGCCCTGTGTCTGTCT	NA	False	NA	-32	True	AATAAA	-16	NA	21104722	21090081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21091141_21091410_21091543_21091864_21093291_21093585_21093675_21104510
transcript_55749.nic	chr14	+	1902	3	ISM	ENSG00000165801.10	ENST00000555038.5	1796	4	-647	692	-647	-692	5prime_fragment	FALSE	canonical	3	202	junction_1	10.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAACAGAAGAAAGAAGCG	21069456	True	NA	NA	False	GGGGCT	-37	NA	21069625	21074861	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_21070400_21073044_21073243_21073931
transcript_55751.known	chr14	-	567	3	FSM	ENSG00000165804.16	ENST00000554923.1	567	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAGCGCCCACGTAGTCCT	-21093919	False	793	NA	False	NA	NA	NA	21094535	21092971	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21093305_21093585_21093675_21094390
transcript_55752.known	chr14	-	798	3	FSM	ENSG00000165804.16	ENST00000555270.5	798	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	100.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGGGCTCCCGAGCGTCCC	-21093884	False	NA	NA	False	NA	NA	NA	21094500	21092662	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21093291_21093585_21093675_21094419
transcript_55754.known	chr14	-	654	3	FSM	ENSG00000165804.16	ENST00000555697.1	654	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	81	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGCCGTGAGCGCAGGG	-21103487	False	NA	NA	False	NA	NA	NA	21103579	21093202	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21093291_21093585_21093675_21103102
transcript_55756.known	chr14	+	732	2	FSM	ENSG00000179636.15	ENST00000533755.5	732	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGCCAAGAACGCCCGAA	21024086	True	NA	NA	False	NA	NA	NA	21024108	21031008	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_21024345_21030512
transcript_55758.known	chr14	-	2513	1	FSM	ENSG00000165804.16	ENST00000624093.1	2513	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTTCTGCCTCATATT	-21104124	False	NA	NA	False	ATTAAA	-16	NA	21104216	21101703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21101700_21104200
transcript_55759.known	chr14	+	4902	23	FSM	ENSG00000165801.10	ENST00000556399.5	4902	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	82.7775696252182	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAGCTAGAGTAGTCCTC	21067539	True	NA	28	True	ATTAAA	-25	NA	21070290	21089555	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_21070400_21073044_21073243_21073931_21074992_21075331_21075500_21075622_21075766_21076359_21076457_21076562_21076644_21076773_21076891_21078176_21078273_21078372_21078489_21078883_21079011_21080659_21080783_21080872_21081017_21081508_21082120_21082243_21082479_21082830_21082918_21083834_21084051_21084752_21084924_21085688_21085867_21087000_21087106_21087967_21088099_21088829_21088877_21089013
transcript_55760.known	chr14	+	358	2	FSM	ENSG00000178107.2	ENST00000320322.2	358	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTTGTATTTTATCAA	21108027	False	NA	NA	False	AATAAA	-23	NA	21108042	21116703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_21108160_21116462
transcript_55769.known	chr14	-	1924	10	FSM	ENSG00000092199.19	ENST00000554969.5	1924	10	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_8	3068.17418663057	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGTATTTTATTATTG	-21168426	True	NA	-13	True	ATTAAA	-37	NA	21269425	21210533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21211307_21211405_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21263310_21263337_21263666_21263830_21269297
transcript_55782.known	chr14	-	1714	9	FSM	ENSG00000092199.19	ENST00000555309.5	1714	9	0	0	0	0	multi-exon	FALSE	canonical	3	470	junction_2	2805.80899374405	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGGACCTTTTTTCCTC	-21168422	True	NA	-92	True	NA	NA	NA	21269421	21210612	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21211307_21211405_21211564_21211809_21211924_21212959_21213118_21230318_21230367_21230957_21231073_21233952_21234230_21263310_21263337_21269297
transcript_55784.known	chr14	-	748	9	FSM	ENSG00000092199.19	ENST00000554539.5	748	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	2528.31747104176	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGACAGCGCCAATGGCGA	-21168446	True	NA	29	True	AAAAAG	-24	NA	21269445	21211255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21211307_21211405_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231028_21234218_21234230_21263310_21263337_21269297
transcript_55786.known	chr14	-	1658	9	FSM	ENSG00000092199.19	ENST00000555914.5	1658	9	0	0	0	0	multi-exon	FALSE	canonical	3	470	junction_2	2381.63415208445	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGGACCTTTTTTCCTC	-21168405	True	NA	-92	True	NA	NA	NA	21269404	21210612	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21211307_21211405_21211564_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21263310_21263337_21269297
transcript_5579.known	chr1	+	1950	2	FSM	ENSG00000188060.8	ENST00000373826.3	1950	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCATCTCAGAATCTGCC	NA	False	NA	9	True	AATAAA	-15	NA	28592199	28595443	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28592400_28593693
transcript_55790.known	chr14	-	1039	9	FSM	ENSG00000092199.19	ENST00000554383.5	1039	9	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_8	3108.87539956171	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGATGACCAGGTGAAAAC	-21168443	True	NA	NA	False	AATGAA	-7	NA	21269442	21211417	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21263310_21263337_21268622_21268669_21269297
transcript_55799.nic	chr14	-	2033	8	NIC	ENSG00000092199.19	novel	3165	9	NA	NA	-245	0	combination_of_known_junctions	FALSE	canonical	3	2080	junction_7	2011.2125695709	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCCTGGTTTTTTATTT	NA	False	NA	-29	True	AATAAA	-36	NA	21269739	21210549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_21211307_21211405_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21269297
transcript_55803.known	chr14	-	1790	8	FSM	ENSG00000092199.19	ENST00000553753.5	1790	8	0	0	0	0	multi-exon	FALSE	canonical	3	5281	junction_7	997.361867066087	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCTTATTAAACCAGGAAT	-21168404	True	NA	-61	True	AATAAA	-4	NA	21269403	21210581	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21263310_21263337_21269297
transcript_55804.known	chr14	-	1371	8	FSM	ENSG00000092199.19	ENST00000557201.5	1371	8	0	0	0	0	multi-exon	FALSE	canonical	3	1574	junction_5	2716.54956719372	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTGTCTCCAAAATAAT	-21168426	True	NA	-9	True	AATAAA	-19	NA	21269425	21210936	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21211307_21211405_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230957_21231073_21233952_21234230_21269297
transcript_55806.known	chr14	-	1156	8	FSM	ENSG00000092199.19	ENST00000556628.5	1156	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2699.2800476257	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATCTCTTGTTATGCAG	-21168411	True	NA	5	True	AATAAA	-33	NA	21269410	21210922	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21211307_21211405_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21234077_21234230_21263310_21263337_21269297
transcript_5581.known	chr1	+	2236	2	FSM	ENSG00000188060.8	ENST00000465518.3	2236	2	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	0	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGAATCTGCCTCCTGG	28592218	True	NA	15	True	AATAAA	-21	NA	28592264	28595449	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28592745_28593693
transcript_55810.known	chr14	-	3301	7	FSM	ENSG00000092199.19	ENST00000336053.10	3301	7	0	0	0	0	multi-exon	FALSE	canonical	3	2080	junction_6	2035.65572291147	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGTAACTTTTTTTATT	-21269483	False	NA	3	True	ATTAAA	-31	NA	21269494	21209135	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21269297
transcript_55825.known	chr14	-	4433	26	FSM	ENSG00000092201.10	ENST00000216297.7	4433	26	0	0	0	0	multi-exon	FALSE	canonical	3	1308	junction_10	133.961391452911	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCTGTGACCGTTCATT	-21347440	True	NA	-10	True	AATAAA	-32	NA	21384019	21351475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21352819_21353487_21353566_21353702_21353833_21354410_21354541_21357196_21357367_21357926_21358003_21358314_21358428_21359483_21359610_21360414_21360534_21360845_21360973_21361077_21361214_21362196_21362325_21362793_21362948_21363033_21363150_21363232_21363329_21363437_21363504_21364826_21364940_21365069_21365144_21366438_21366530_21368268_21368442_21369203_21369356_21369749_21369897_21370335_21370489_21371873_21372045_21373337_21373431_21383861
transcript_55848.nic	chr14	-	1708	12	ISM	ENSG00000092201.10	ENST00000216297.7	4433	26	-229	11765	-229	6108	5prime_fragment	FALSE	canonical	3	1526	junction_7	85.5918625930571	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAAGAGTAAGTTTACTA	-21384231	False	26	32	True	NA	NA	NA	21384248	21363240	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_21363329_21363437_21363504_21364826_21364940_21365069_21365144_21366438_21366530_21368268_21368442_21369203_21369356_21369749_21369897_21370335_21370489_21371873_21372045_21373337_21373431_21383861
transcript_55850.nic	chr14	-	1414	11	ISM	ENSG00000092201.10	ENST00000216297.7	4433	26	-23	11962	-23	5911	5prime_fragment	FALSE	canonical	3	1526	junction_6	89.3913306758547	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAGGAAGAAGATAGATAAG	-21347463	True	NA	0	True	AAGAAA	-28	NA	21384042	21363437	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_21363504_21364826_21364940_21365069_21365144_21366438_21366530_21368268_21368442_21369203_21369356_21369749_21369897_21370335_21370489_21371873_21372045_21373337_21373431_21383861
transcript_55857.nic	chr14	-	1421	9	ISM	ENSG00000092201.10	ENST00000216297.7	4433	26	-229	13614	-229	4259	5prime_fragment	FALSE	canonical	3	1526	junction_4	80.1810451416044	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAATACAAACTGAAGAAAG	-21384231	False	26	NA	False	NA	NA	NA	21384248	21365089	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_21365144_21366438_21366530_21368268_21368442_21369203_21369356_21369749_21369897_21370335_21370489_21371873_21372045_21373337_21373431_21383861
transcript_5586.known	chr1	+	1912	10	FSM	ENSG00000162419.13	ENST00000294409.2	1912	10	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_2	16.4451951780587	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAACAAAATC	28666470	True	NA	-10	True	NA	NA	NA	28668779	28714873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28668840_28683582_28683741_28690073_28690187_28691584_28691710_28692941_28693046_28696926_28697085_28702437_28702570_28704191_28704330_28710519_28710643_28714072
transcript_55864.known	chr14	-	888	3	FSM	ENSG00000092201.10	ENST00000555752.1	888	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	891	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCGTTGTCACTGTTGTCT	-21347434	True	NA	NA	False	NA	NA	NA	21384013	21372074	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21372718_21373337_21373431_21383861
transcript_55865.nic	chr14	-	444	3	ISM	ENSG00000092201.10	ENST00000556217.5	1027	5	-32	2439	-23	200	5prime_fragment	FALSE	canonical	3	1619	junction_1	91.5	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTCAGGATTAATAAAGAAT	-21347463	True	NA	4	True	NA	NA	NA	21384042	21371874	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_21372045_21373337_21373431_21383861
transcript_55869.known	chr14	-	915	2	FSM	ENSG00000092201.10	ENST00000555943.1	915	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTTTTGAGAAAAATGATCA	-21347402	True	NA	NA	False	AATAAA	-23	NA	21383981	21382974	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21383770_21383861
transcript_55873.known	chr14	-	2324	6	FSM	ENSG00000092201.10	ENST00000557394.5	2324	6	0	0	0	0	multi-exon	FALSE	canonical	3	1748	junction_4	64.4533940145901	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCACCTGTGACCGTTC	-21358370	False	NA	-13	True	AATAAA	-29	NA	21358402	21351478	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21352819_21353487_21353566_21353702_21353833_21354410_21354541_21357196_21357367_21357926
transcript_55877.known	chr14	-	8467	38	FSM	ENSG00000100888.15	ENST00000646647.2	8467	38	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_37	26.1457956401538	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCACTCTTCCTTTGTTCT	-21451811	True	NA	-30	True	AATAAA	-16	NA	21456123	21385198	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21386177_21390946_21391064_21391462_21391643_21391832_21391947_21392506_21392810_21393105_21393255_21393475_21394196_21394276_21394486_21394911_21395120_21395297_21395353_21395816_21395893_21397822_21397953_21399601_21399706_21399980_21400071_21400150_21400308_21400412_21400613_21400874_21401072_21401402_21401514_21401956_21402137_21402335_21402504_21403016_21403213_21403452_21403664_21405208_21405465_21405720_21405865_21406855_21407033_21408311_21408556_21408703_21408826_21409850_21409989_21412912_21412997_21414300_21414419_21414937_21414994_21415573_21415643_21415724_21415908_21426127_21426243_21427868_21428255_21428963_21429336_21430800_21431859_21456031
transcript_55889.known	chr14	-	8259	39	FSM	ENSG00000100888.15	ENST00000643469.1	8259	39	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_37	29.2951004194773	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTGAAAAGGAAAAAAAAAAA	-21437293	False	NA	NA	False	NA	NA	NA	21437308	21385494	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21386177_21390946_21391064_21391462_21391643_21391832_21391947_21392506_21392810_21393105_21393255_21393475_21394196_21394276_21394486_21394911_21395120_21395297_21395353_21395816_21395893_21397822_21397953_21399601_21399706_21399980_21400071_21400150_21400308_21400412_21400613_21400874_21401072_21401402_21401514_21401956_21402137_21402335_21402504_21403016_21403213_21403452_21403664_21405208_21405465_21405720_21405865_21406855_21407033_21408311_21408556_21408703_21408826_21409850_21409989_21412912_21412997_21414300_21414419_21414937_21414994_21415573_21415643_21415724_21415908_21426127_21426243_21427868_21428255_21428963_21429336_21430800_21431859_21436900_21436966_21437193
transcript_5589.known	chr1	+	6358	10	FSM	ENSG00000162419.13	ENST00000373816.6	6358	10	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	9.87452139799728	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTTCATATGAAGGTTC	28666474	True	NA	11	True	AATAAA	-22	NA	28668783	28719353	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28668840_28683582_28683741_28690103_28690187_28691584_28691710_28692941_28693046_28696926_28697085_28702437_28702570_28704191_28704330_28710519_28710643_28714072
transcript_55890.known	chr14	-	1104	7	FSM	ENSG00000100888.15	ENST00000642518.1	1104	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	25.3163320144658	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACAGAGGACCTGGATAT	-21436076	True	NA	-36	True	NA	NA	NA	21437275	21415871	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21415908_21426127_21426243_21427868_21428255_21428963_21429336_21431810_21431859_21436900_21436966_21437193
transcript_55891.nic	chr14	-	2350	6	ISM	ENSG00000100888.15	ENST00000643469.1	8259	39	25	30377	-7	0	intron_retention	FALSE	canonical	2	10	junction_5	19.0515091265758	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACAGAGGACCTGGATAT	-21436084	True	NA	-36	True	NA	NA	NA	21437283	21415871	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_21415908_21426127_21426243_21427868_21428255_21428963_21429336_21430800_21431859_21436900
transcript_55900.known	chr14	-	2815	5	FSM	ENSG00000100888.15	ENST00000643048.1	2815	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	21.7428149051589	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCAATACTCGTTTCCTCA	-21436074	True	NA	NA	False	NA	NA	NA	21437273	21425323	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21426243_21427868_21428255_21428963_21429336_21430800_21431859_21437193
transcript_55907.known	chr14	-	1980	11	FSM	ENSG00000165819.12	ENST00000298717.9	1980	11	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_2	74.5601099784597	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAAGTCCATTCTGGCT	-21502021	True	NA	-11	True	AATAAA	-21	NA	21511340	21498137	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21498370_21499024_21499138_21499305_21499372_21499491_21499601_21499763_21499803_21500494_21500683_21500912_21501130_21501727_21501904_21503172_21503578_21503663_21503882_21511123
transcript_55920.known	chr14	-	2030	10	FSM	ENSG00000165819.12	ENST00000537163.5	2030	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_7	143.148545828589	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACATTTGTATTGTAGTT	-21502021	True	NA	-35	True	TTTAAA	-1	NA	21511340	21498161	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21498370_21499024_21499601_21499763_21499803_21500494_21500683_21500912_21501130_21501727_21501904_21503172_21503292_21503505_21503578_21503663_21503882_21511123
transcript_55924.nnic	chr14	-	2310	9	NNC	ENSG00000129472.15	novel	2914	8	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.8850528248603	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATACTCCATGTGTCATT	-21474031	False	NA	-9	True	ATTAAA	-22	NA	21476987	21459019	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_-_21460346_21460977_21461304_21462349_21462419_21463655_21463768_21468356_21468450_21468669_21468753_21474866_21474935_21476527_21476600_21476826
transcript_55925.known	chr14	-	1318	9	FSM	ENSG00000129472.15	ENST00000649801.1	1318	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	10.8850528248603	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCATATGTCTATTTATA	-21473953	True	NA	NA	False	NA	NA	NA	21476909	21459667	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21460341_21461238_21461304_21462349_21462419_21463655_21463768_21468356_21468450_21468669_21468753_21474866_21474935_21476527_21476600_21476826
transcript_55932.known	chr14	-	2124	9	FSM	ENSG00000165819.12	ENST00000543235.5	2124	9	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_6	147.543002206136	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTATTTAAATAAACATTT	-21501991	True	NA	-46	True	NA	NA	NA	21511310	21498172	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21498370_21499024_21499601_21499763_21499803_21500494_21500683_21500912_21501130_21501727_21501825_21503172_21503578_21503663_21503882_21511123
transcript_55933.nic	chr14	-	2291	9	NIC	ENSG00000165819.12	novel	2030	10	NA	NA	-29	0	intron_retention	FALSE	canonical	3	357	junction_6	62.6766254276664	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGGGATTCTGAAGTCCA	NA	False	NA	-19	True	AATAAA	-13	NA	21511371	21498145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_21498370_21499024_21499601_21499763_21499803_21500494_21500683_21500912_21501130_21501727_21501904_21503172_21503578_21503663_21503882_21511123
transcript_55958.known	chr14	-	1592	4	FSM	ENSG00000165819.12	ENST00000536201.5	1592	4	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_1	70.0587055420111	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCCCTTTTTATTTTCCC	-21502021	True	NA	-56	True	NA	NA	NA	21511340	21501151	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21501904_21503172_21503578_21503663_21503882_21511123
transcript_55959.known	chr14	-	621	3	FSM	ENSG00000129472.15	ENST00000475857.1	621	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	4.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTCAGACTTTTTCTAT	-21474004	True	NA	NA	False	NA	NA	NA	21476960	21474519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21474935_21476527_21476600_21476826
transcript_55962.known	chr14	-	1553	3	FSM	ENSG00000165819.12	ENST00000538267.5	1553	3	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_1	68.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATCTCTTATCTGAAG	-21501940	True	NA	NA	False	NA	NA	NA	21511259	21502378	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21503578_21503663_21503882_21511123
transcript_55964.known	chr14	+	4514	9	FSM	ENSG00000092203.15	ENST00000448790.7	4514	9	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_5	35.134562755213	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGATTGCAATTCTAGC	21470835	True	NA	17	True	AATAAA	-22	NA	21477194	21499170	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_21477285_21477495_21477565_21487450_21487694_21488589_21488851_21489172_21489404_21492295_21492377_21492507_21493258_21495228_21495393_21496545
transcript_55965.known	chr14	+	3766	6	FSM	ENSG00000092203.15	ENST00000673643.1	3766	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	190.757856981043	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGATTGCAATTCTAGCC	21470858	True	NA	18	True	AATAAA	-23	NA	21477217	21499171	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_21477285_21477495_21477565_21487450_21487647_21492613_21493258_21495228_21495393_21496545
transcript_55968.nic	chr14	-	4186	3	NIC	ENSG00000165821.12	novel	3178	4	NA	NA	-32	0	intron_retention	FALSE	canonical	3	60	junction_1	147	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATGTGTTTCTCCTTA	-21516761	True	NA	-4	True	ATTAAA	-16	NA	21526259	21521079	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_21522245_21522832_21525655_21526060
transcript_55969.nic	chr14	-	4364	3	NIC	ENSG00000165821.12	novel	3094	4	NA	NA	-9	0	intron_retention	FALSE	canonical	3	60	junction_1	193.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATGTGTTTCTCCTTA	-21537186	False	NA	-4	True	ATTAAA	-16	NA	21537225	21521079	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_21522245_21522832_21525655_21536848
transcript_55978.known	chr14	-	1466	3	FSM	ENSG00000165821.12	ENST00000611430.4	1466	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	163	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATAGTGTGCAGAGGTG	-21526485	False	NA	NA	False	NA	NA	NA	21526500	21521536	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21522245_21525336_21525655_21526060
transcript_55979.known	chr14	-	1566	3	FSM	ENSG00000165821.12	ENST00000613414.4	1566	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	209.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTTATGTGTTTCTCC	-21536895	False	10041	-7	True	ATTAAA	-13	NA	21536934	21521082	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21522245_21525336_21525655_21536848
transcript_55982.known	chr14	-	4861	2	FSM	ENSG00000165821.12	ENST00000537235.2	4861	2	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_1	0	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATGTGTTTCTCCTTA	-21516848	True	NA	-4	True	ATTAAA	-16	NA	21526346	21521079	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21525655_21526060
transcript_55983.known	chr14	-	553	2	FSM	ENSG00000165821.12	ENST00000541965.1	553	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTCCACCACCCCCTCC	-21527063	True	NA	NA	False	NA	NA	NA	21537104	21525244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21525655_21536961
transcript_55984.known	chr14	-	4942	2	FSM	ENSG00000165821.12	ENST00000614342.1	4942	2	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_1	0	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTATGTGTTTCTCCTT	-21527175	True	NA	-5	True	ATTAAA	-15	NA	21537216	21521080	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_21525655_21536848
transcript_55988.known	chr14	-	684	3	FSM	ENSG00000129562.11	ENST00000250498.9	684	3	0	0	0	0	multi-exon	FALSE	canonical	3	1823	junction_2	117.5	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATATGCCTCTGGCTCTGTT	-22568737	True	NA	-6	True	ATTAAA	-20	NA	22589224	22564906	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22565138_22575058_22575234_22588946
transcript_55989.known	chr14	-	441	2	FSM	ENSG00000129562.11	ENST00000538631.1	441	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATATGCCTCTGGCTCTGT	-22568670	True	NA	-7	True	ATTAAA	-45	NA	22589157	22564907	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22565138_22588946
transcript_55990.known	chr14	-	591	3	FSM	ENSG00000129562.11	ENST00000535847.1	591	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	1026.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATATGCCTCTGGCTCTGTT	-22568733	True	NA	-6	True	ATTAAA	-20	NA	22589220	22564906	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22565138_22575058_22575234_22589035
transcript_55999.nnic	chr14	+	2363	7	NNC	ENSG00000100439.11	novel	3051	7	NA	NA	-65	-2	intron_retention	FALSE	canonical	0	0	junction_3	89.151088981945	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCGGTGGGGATGATGTT	22592915	True	NA	15	True	AATAAA	-15	NA	22598224	22612356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_+_22598330_22601666_22601756_22603389_22603607_22603924_22604080_22606421_22606534_22609723_22609911_22610858
transcript_56.known	ERCC-00154	+	521	1	FSM	ERCC-00154A	DQ854997	521	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00154_+_0_500
transcript_56003.known	chr14	+	3366	7	FSM	ENSG00000100439.11	ENST00000428304.7	3051	7	-63	-252	-53	252	multi-exon	FALSE	canonical	3	176	junction_1	27.6792140222386	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCCTGTGTCTTCTCTGA	22592927	True	NA	NA	False	AATATA	-25	NA	22598236	22613215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_22598330_22601666_22601756_22603389_22603763_22603924_22604080_22606421_22606534_22609723_22609911_22610858
transcript_56012.known	chr14	+	2806	10	FSM	ENSG00000155463.14	ENST00000612549.6	2806	10	0	0	0	0	multi-exon	FALSE	canonical	3	812	junction_1	34.0993465054503	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTAAGTGTTCTGTTGTCT	22756149	True	NA	NA	False	NA	NA	NA	22766687	22773042	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_22766765_22767247_22767410_22767957_22768172_22769790_22769935_22770192_22770279_22770460_22770626_22770804_22770910_22771017_22771181_22771267_22771349_22771433
transcript_56014.known	chr14	+	1679	9	FSM	ENSG00000155463.14	ENST00000495424.5	1679	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	290.16536233672	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCACAGAGTTAGTAAACCT	22756164	True	NA	-16	True	NA	NA	NA	22766702	22771754	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_22766765_22767247_22767410_22767957_22768172_22769796_22769935_22770192_22770626_22770804_22770910_22771017_22771181_22771267_22771349_22771433
transcript_56020.known	chr14	-	380	2	FSM	ENSG00000258458.8	ENST00000554730.1	380	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTAAGCCACTAAGTTGT	-22766447	True	NA	NA	False	AATAAA	-14	NA	22766530	22764384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22764658_22766423
transcript_56021.nnic	chr14	-	2631	11	NNC	ENSG00000155465.20	novel	2272	11	NA	NA	112	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	5.18555686498567	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGTGGCTTCATTTTA	NA	False	NA	-3	True	AATAAA	-17	NA	22822851	22773221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_-_22773717_22773932_22774117_22774353_22774504_22775443_22775541_22775832_22775937_22776194_22776319_22778792_22778938_22779925_22780052_22812899_22813441_22815319_22815452_22822318
transcript_56022.known	chr14	-	2447	10	FSM	ENSG00000155465.20	ENST00000397532.9	2447	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	4.15739709641549	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCTGAGTGGCTTCATT	-22815779	False	NA	-6	True	AATAAA	-14	NA	22815803	22773224	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22773717_22773932_22774117_22774353_22774504_22775443_22775541_22775832_22775937_22776194_22776319_22778792_22778938_22779925_22780052_22812899_22813441_22815319
transcript_56028.known	chr14	+	1042	5	FSM	ENSG00000172590.18	ENST00000311892.10	1042	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	803.978972050886	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATGCACAGTTTAGGCC	22807243	True	NA	-43	True	NA	NA	NA	22829915	22834977	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_22829949_22830049_22830111_22830186_22830255_22830963_22831038_22834171
transcript_56029.known	chr14	+	398	5	FSM	ENSG00000172590.18	ENST00000556840.5	398	5	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_1	674.943886556505	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCTCTGGATTTCTTT	22807248	True	NA	18	True	AATAAA	-26	NA	22829920	22834347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_22829949_22830049_22830111_22830186_22830255_22833417_22833483_22834171
transcript_56032.known	chr14	+	411	5	FSM	ENSG00000172590.18	ENST00000432849.7	411	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_4	788.0439391303	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTCTCTGGATTTCTT	22807230	True	NA	17	True	AATAAA	-25	NA	22829902	22834346	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_22829941_22830052_22830111_22830186_22830255_22833417_22833490_22834171
transcript_56036.known	chr14	+	333	4	FSM	ENSG00000172590.18	ENST00000397505.2	333	4	0	0	0	0	multi-exon	TRUE	canonical	3	85	junction_3	775.654992033615	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCTCTGGATTTCTTT	22807240	True	NA	18	True	AATAAA	-26	NA	22829912	22834347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_22829941_22830049_22830111_22830186_22830255_22834171
transcript_56040.known	chr14	+	220	4	FSM	ENSG00000172590.18	ENST00000556465.5	220	4	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_3	798.679048318048	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAGTTGCAGGAAGAACA	22807237	True	NA	-95	True	NA	NA	NA	22829909	22834234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_22829941_22830052_22830111_22830186_22830255_22834171
transcript_56041.known	chr14	+	362	4	FSM	ENSG00000172590.18	ENST00000556654.5	362	4	0	0	0	0	multi-exon	FALSE	canonical	2	56	junction_1	760.65950916878	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTCTCTGGATTTCTT	22807214	True	NA	17	True	AATAAA	-25	NA	22829886	22834346	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_22829941_22830186_22830255_22833417_22833483_22834171
transcript_56042.known	chr14	+	3701	10	FSM	ENSG00000157227.14	ENST00000311852.11	3701	10	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_4	5.61303597347337	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGTGTGGCTGAGCTC	22828825	True	NA	19	True	AATAAA	-13	NA	22836584	22847758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_22836926_22841490_22841640_22841912_22842036_22842409_22842718_22843256_22843419_22843709_22843871_22844370_22844510_22844629_22844781_22845250_22845367_22845707
transcript_56046.known	chr14	+	3532	10	FSM	ENSG00000157227.14	ENST00000680097.1	3532	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	15.0661094620007	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGTGTGGCTGAGCTC	22828825	True	NA	19	True	AATAAA	-13	NA	22836584	22847758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_22836926_22841490_22841640_22841912_22842036_22842578_22842718_22843256_22843419_22843709_22843871_22844370_22844510_22844629_22844781_22845250_22845367_22845707
transcript_5605.known	chr1	+	2825	6	FSM	ENSG00000198492.16	ENST00000542507.5	2825	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	448.505696730822	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCTAGTACCATTTAGTA	28735890	True	NA	21	True	AATAAA	-22	NA	28736620	28769774	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28736810_28737046_28737148_28737657_28737683_28738258_28738339_28742402_28743987_28768928
transcript_56050.known	chr14	+	1780	8	FSM	ENSG00000197324.9	ENST00000546834.5	1780	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	87.8073029364847	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGACTGGGGAGAGGGCT	22872253	False	NA	NA	False	NA	NA	NA	22872303	22879310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_22872338_22872737_22872783_22873310_22873447_22875054_22875246_22875354_22876373_22876688_22876819_22876939_22877054_22879198
transcript_56054.nnic	chr14	+	2380	7	NNC	ENSG00000197324.9	novel	6892	7	NA	NA	-24	1	intron_retention	TRUE	canonical	3	15	junction_5	90.6433793623242	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGCAAATTAGCTGCGAG	NA	False	NA	16	True	AATAAA	-20	NA	22871715	22878084	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_+_22872338_22872737_22872783_22873310_22873447_22875054_22875246_22875354_22875466_22876688_22876819_22876939
transcript_56056.known	chr14	+	6892	7	FSM	ENSG00000197324.9	ENST00000359591.9	6892	7	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_4	22.1359436211787	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTAGGCCATGACTGAG	22869433	True	NA	NA	False	AATAAA	-19	NA	22871739	22881713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_22872338_22872737_22872783_22873310_22873447_22875054_22875246_22875354_22876373_22876688_22876819_22876939
transcript_56062.known	chr14	+	1858	5	FSM	ENSG00000139890.10	ENST00000267396.9	1858	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	3.20156211871642	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCACTTTTGACTCTG	22883080	True	NA	9	True	AATAAA	-17	NA	22883221	22887678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_22883391_22884673_22885016_22885265_22885340_22886023_22886232_22886613
transcript_56073.nic	chr14	-	2067	18	NIC	ENSG00000100462.16	novel	2304	17	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_1	209.680973687752	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACCATGCTGCCCCCTGCC	-22920536	True	NA	-6	True	AATAAA	-20	NA	22929395	22920528	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_22920732_22920987_22921057_22922175_22922241_22922442_22922560_22922741_22922836_22923050_22923161_22924007_22924184_22924269_22924393_22924478_22924538_22924631_22924710_22924878_22925041_22926132_22926297_22926505_22926556_22926701_22926815_22927525_22927661_22928125_22928212_22928496_22928616_22929251
transcript_56082.known	chr14	-	2418	17	FSM	ENSG00000100462.16	ENST00000397441.6	2418	17	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_16	210.789281259152	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGCCCCCTGCCACTA	-22920542	True	NA	-2	True	AATAAA	-24	NA	22929401	22920524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22921057_22922175_22922241_22922442_22922560_22922741_22922836_22923050_22923161_22924007_22924184_22924269_22924393_22924478_22924538_22924631_22924710_22924878_22925041_22926132_22926297_22926505_22926556_22926701_22926815_22927525_22927661_22928125_22928212_22928496_22928616_22929166
transcript_56083.known	chr14	-	2304	17	FSM	ENSG00000100462.16	ENST00000324366.13	2304	17	0	0	0	0	multi-exon	FALSE	canonical	3	754	junction_14	81.1553053949648	1115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACCATGCTGCCCCCTGCC	-22920517	True	NA	-6	True	AATAAA	-20	NA	22929376	22920528	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22921057_22922175_22922241_22922442_22922560_22922741_22922836_22923050_22923161_22924007_22924184_22924269_22924393_22924478_22924538_22924631_22924710_22924878_22925041_22926132_22926297_22926505_22926556_22926701_22926815_22927525_22927661_22928125_22928212_22928496_22928616_22929251
transcript_5609.known	chr1	+	2744	5	FSM	ENSG00000198492.16	ENST00000373812.8	2744	5	0	0	0	0	multi-exon	FALSE	canonical	3	1001	junction_1	84.4463587136829	1712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTAGTACCATTTAGTAT	28727221	True	NA	22	True	AATAAA	-23	NA	28736939	28769775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28737148_28737657_28737683_28738258_28738339_28742402_28743987_28768928
transcript_56092.known	chr14	-	2271	16	FSM	ENSG00000100462.16	ENST00000216350.12	2271	16	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_14	293.933098964146	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGACCATGCTGCCCCCTGC	-22920532	True	NA	-7	True	AATAAA	-19	NA	22929391	22920529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22921057_22922175_22922241_22922442_22922560_22922741_22922836_22923050_22923161_22924007_22924184_22924269_22924393_22924478_22924538_22924631_22924710_22924878_22925041_22926132_22926297_22926505_22926556_22926701_22926815_22927525_22927615_22928496_22928616_22929166
transcript_56093.known	chr14	-	1857	16	FSM	ENSG00000100462.16	ENST00000553897.5	1857	16	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_14	224.829317977488	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCAGCTTCAGGTTCTGC	-22920549	True	NA	NA	False	NA	NA	NA	22929408	22920875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22921057_22922175_22922241_22922442_22922560_22922741_22922836_22923050_22923161_22924007_22924184_22924269_22924393_22924478_22924538_22924631_22924710_22924878_22925041_22926132_22926297_22926505_22926556_22926701_22926815_22927525_22927615_22928496_22928616_22929251
transcript_56105.known	chr14	-	10007	14	FSM	ENSG00000100461.18	ENST00000359890.8	10007	14	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_11	55.4387555894049	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGGGAGTGAGGGTTT	-22915461	True	NA	NA	False	AATAAA	-19	NA	22919149	22893203	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22901734_22901813_22901884_22901979_22902100_22902186_22902383_22904260_22904327_22904874_22905013_22905093_22905247_22905335_22905454_22905605_22905660_22906194_22906369_22908332_22908381_22909482_22909596_22911327_22911404_22918998
transcript_56116.known	chr14	-	2430	13	FSM	ENSG00000100461.18	ENST00000399922.6	2430	13	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_10	34.2121648280582	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAAGCCTCCTCCTTGTGG	-22915494	True	NA	-32	True	CATAAA	-41	NA	22919182	22900765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22901734_22901813_22901884_22901979_22902100_22902186_22902383_22904260_22904327_22904874_22905013_22905093_22905247_22905335_22905454_22905605_22905660_22906194_22906369_22909482_22909596_22911327_22911404_22918998
transcript_56128.known	chr14	-	1743	12	FSM	ENSG00000100461.18	ENST00000542016.6	1743	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_10	65.6330898201421	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTCAAGGAAAACCCTTAG	-22915490	True	NA	NA	False	NA	NA	NA	22919178	22901335	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22901734_22901813_22901884_22901979_22902100_22902186_22902383_22904260_22904327_22904874_22905013_22905093_22905247_22905335_22905454_22905605_22905660_22906194_22906369_22911327_22911404_22918998
transcript_56130.known	chr14	-	2361	12	FSM	ENSG00000100461.18	ENST00000346528.9	2361	12	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_8	66.1098509807291	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTACAAAAGGCAAGCCT	-22915490	True	NA	-43	True	CATAAA	-30	NA	22919178	22900776	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22901734_22901813_22901884_22901979_22902100_22902186_22902383_22904260_22904327_22904874_22905013_22905093_22905247_22905335_22905454_22906194_22906369_22909482_22909596_22911327_22911404_22918998
transcript_56149.known	chr14	-	2320	11	FSM	ENSG00000100461.18	ENST00000307814.10	2320	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	81.7420332509536	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAATAAAAATAAAAAAA	-22915461	True	NA	NA	False	NA	NA	NA	22919149	22902961	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22904191_22904260_22904327_22904874_22905013_22905093_22905247_22905335_22905454_22905605_22905660_22906194_22906369_22908332_22908381_22909482_22909596_22911327_22911404_22918998
transcript_56154.known	chr14	-	628	2	FSM	ENSG00000100462.16	ENST00000557015.1	628	2	0	0	0	0	multi-exon	FALSE	canonical	3	876	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCGGTAAGACTGTTTGAC	-22920535	True	NA	NA	False	NA	NA	NA	22929394	22928130	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22928616_22929251
transcript_56156.nic	chr14	-	1819	10	NIC	ENSG00000092036.19	novel	1642	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	41	junction_9	70.3916731888154	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCTTAGGATTTTAGTCA	-22953279	True	NA	-32	True	AATAAA	-12	NA	22957161	22946235	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22951554_22951690_22952327_22952460_22952540_22952684_22955099_22955177_22956745
transcript_56157.nnic	chr14	-	1768	10	NNC	ENSG00000092036.19	novel	1642	10	NA	NA	-3	0	intron_retention	FALSE	canonical	2	3	junction_9	81.4466423835603	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCTTAGGATTTTAGTCA	-22953275	True	NA	-32	True	AATAAA	-12	NA	22957157	22946235	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22951554_22951690_22952327_22952460_22952540_22952684_22955099_22955177_22956792
transcript_56158.known	chr14	-	1586	10	FSM	ENSG00000092036.19	ENST00000541587.6	1586	10	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_9	40.8275506109403	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTTAGTCATTTTCCTT	-22953208	True	NA	-24	True	AATAAA	-20	NA	22957090	22946227	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22951554_22951690_22952327_22952460_22952540_22952684_22955099_22955177_22956915
transcript_56159.known	chr14	-	1642	10	FSM	ENSG00000092036.19	ENST00000206474.11	1642	10	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_9	57.2139152546427	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTTAGTCATTTTCCTT	-22953272	True	NA	-24	True	AATAAA	-20	NA	22957154	22946227	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22951554_22951690_22952327_22952460_22952540_22952684_22955099_22955177_22956923
transcript_56161.known	chr14	-	1447	9	FSM	ENSG00000092036.19	ENST00000490506.5	1447	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	80.3877322730278	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTTAGTCATTTTCCTT	-22953212	True	NA	-24	True	AATAAA	-20	NA	22957094	22946227	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22951554_22951690_22952327_22952460_22955099_22955177_22956915
transcript_56163.known	chr14	-	1626	9	FSM	ENSG00000092036.19	ENST00000555986.5	1626	9	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_8	88.1616944880258	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGATTATCTCCTGAAT	-22953255	True	NA	-66	True	NA	NA	NA	22957137	22946269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22952327_22952460_22952540_22952684_22955099_22955177_22956745
transcript_56165.known	chr14	-	1454	9	FSM	ENSG00000092036.19	ENST00000555367.5	1454	9	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_5	66.3474519103786	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCCTGAATAAAGTTATG	-22953244	True	NA	-57	True	NA	NA	NA	22957126	22946260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22952327_22952460_22952540_22952684_22955099_22955177_22956915
transcript_56166.known	chr14	-	1474	9	FSM	ENSG00000092036.19	ENST00000342454.12	1474	9	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_5	77.6140290153784	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCTTAGGATTTTAGTCA	-22953247	True	NA	-32	True	AATAAA	-12	NA	22957129	22946235	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22952327_22952460_22952540_22952684_22955099_22955177_22956923
transcript_56172.known	chr14	-	4168	8	FSM	ENSG00000129474.16	ENST00000262713.7	4168	8	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_3	9.87679200996777	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCTTGTGTAACTTTACA	-22978676	True	NA	-1	True	ATTAAA	-38	NA	22982551	22971176	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22973569_22974046_22974116_22974838_22974891_22974973_22975105_22976455_22976519_22976644_22976713_22978343_22978446_22981260
transcript_56184.known	chr14	-	751	2	FSM	ENSG00000129474.16	ENST00000553736.1	751	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGATCTTGCTGCATCT	-22981570	False	NA	NA	False	AATAAA	-19	NA	22981586	22978611	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22979037_22981260
transcript_56189.known	chr14	-	3360	7	FSM	ENSG00000100802.15	ENST00000299088.11	3360	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	17.4164673034842	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATGGTTCGACTTAGGATT	-23009721	True	NA	NA	False	AATAAA	-37	NA	23010143	22985893	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_22987635_22987902_22988016_22989741_22989846_22990065_22990128_22995947_22996269_22998426_22999403_23010100
transcript_5619.known	chr1	+	879	4	FSM	ENSG00000198492.16	ENST00000496288.5	879	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	499.011689909832	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCCTGCAAAACAGCAACC	28727246	True	NA	NA	False	NA	NA	NA	28736964	28743002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28737148_28737657_28737683_28738258_28738330_28742402
transcript_56192.known	chr14	-	1625	1	FSM	ENSG00000280129.1	ENST00000623843.1	1625	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGTGTCTCCTCTTTTT	-23006701	False	422	NA	False	AATAAA	-19	NA	23007123	23005498	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23005500_23007100
transcript_56199.known	chr14	-	1117	4	FSM	ENSG00000100804.19	ENST00000493471.2	1117	4	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	1345.9323905754	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCAGCCTGTGTTGCAT	-23015340	True	NA	-8	True	NA	NA	NA	23034890	23025857	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23026376_23027744_23027830_23033367_23033675_23034683
transcript_56201.known	chr14	-	444	3	FSM	ENSG00000100804.19	ENST00000555895.5	444	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	1498.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTTTGTTTGTTTGTTT	-23034665	False	NA	-3	True	AATAAA	-16	NA	23034727	23016542	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23016636_23033367_23033675_23034683
transcript_56206.known	chr14	-	796	3	FSM	ENSG00000100804.19	ENST00000334454.10	796	3	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_2	1573	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTCATGGATCGGGGCT	-23015335	True	NA	NA	False	NA	NA	NA	23034885	23026296	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23026376_23033367_23033675_23034475
transcript_56207.known	chr14	-	1044	3	FSM	ENSG00000100804.19	ENST00000361611.11	1044	3	0	0	0	0	multi-exon	FALSE	canonical	3	3047	junction_2	58.5	2849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCAGCCTGTGTTGCATCT	-23015350	True	NA	-6	True	NA	NA	NA	23034900	23025855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23026376_23033367_23033675_23034683
transcript_56209.known	chr14	-	900	3	FSM	ENSG00000100804.19	ENST00000425762.2	900	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	1559.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTACTTTCTTGGATG	-23035168	True	NA	-15	True	NA	NA	NA	23035230	23025901	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23026376_23033367_23033675_23035111
transcript_56210.known	chr14	-	729	2	FSM	ENSG00000100804.19	ENST00000460922.2	729	2	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCAGCCTGTGTTGCAT	-23015344	True	NA	-8	True	NA	NA	NA	23034894	23025857	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23026376_23034683
transcript_56213.known	chr14	-	3552	14	FSM	ENSG00000139880.21	ENST00000397359.7	3552	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	19.2132227643902	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTGCTTCTGTTTTTGC	-23056263	True	NA	0	True	AATAAA	-26	NA	23057538	23047061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23047375_23047460_23048480_23049026_23049276_23049626_23049739_23049821_23049944_23051969_23052084_23052472_23052610_23053495_23053750_23054140_23054329_23054505_23054674_23054746_23054867_23055058_23055354_23055532_23055858_23057402
transcript_5622.known	chr1	+	2719	4	FSM	ENSG00000198492.16	ENST00000541996.5	2719	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	552.792506783111	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTAGTACCATTTAGTAT	28727221	True	NA	22	True	AATAAA	-23	NA	28736939	28769775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28737148_28738258_28738339_28742402_28743987_28768928
transcript_56220.nnic	chr14	-	3442	13	NNC	ENSG00000139880.21	novel	3415	13	NA	NA	-123	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	16.4435059792274	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGCCCTGCTTCTGTT	-23057647	False	NA	-5	True	AATAAA	-21	NA	23057661	23047066	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_-_23047375_23047460_23048480_23049026_23049276_23049626_23049739_23049821_23049944_23052472_23052610_23053495_23053750_23054140_23054329_23054505_23054674_23054746_23054867_23055058_23055240_23055532_23055858_23057402
transcript_56221.known	chr14	-	3415	13	FSM	ENSG00000139880.21	ENST00000487137.7	3415	13	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	10.2048463432278	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGCCCTGCTTCTGTT	-23056245	True	NA	-5	True	AATAAA	-21	NA	23057520	23047066	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23047375_23047460_23048480_23049026_23049276_23049626_23049739_23049821_23049944_23052472_23052610_23053495_23053750_23054140_23054329_23054505_23054674_23054746_23054867_23055058_23055354_23055532_23055858_23057402
transcript_56226.nnic	chr14	-	2799	13	NNC	ENSG00000139880.21	novel	3415	13	NA	NA	-69	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	15.2943344630182	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGCCCTGCTTCTGTT	-23056332	True	NA	-5	True	AATAAA	-21	NA	23057607	23047066	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_-_23047375_23048163_23048480_23049026_23049276_23049626_23049739_23049821_23049944_23052472_23052610_23053495_23053750_23054140_23054329_23054505_23054674_23054746_23054867_23055058_23055354_23055532_23055858_23057402
transcript_56227.nnic	chr14	-	2295	12	NNC	ENSG00000139880.21	novel	3415	13	NA	NA	-77	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	16.8537706990709	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGCCCTGCTTCTGTT	-23056340	True	NA	-5	True	AATAAA	-21	NA	23057615	23047066	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_-_23047375_23047460_23047514_23049626_23049739_23049821_23049944_23052472_23052610_23053495_23053750_23054140_23054329_23054505_23054674_23054746_23054867_23055058_23055354_23055532_23055858_23057402
transcript_56230.nic	chr14	-	4089	12	NIC	ENSG00000139880.21	novel	3415	13	NA	NA	-109	0	intron_retention	FALSE	canonical	3	30	junction_4	10.3436809471866	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGCCCTGCTTCTGTT	-23057633	False	NA	-5	True	AATAAA	-21	NA	23057647	23047066	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_23047375_23047460_23049276_23049626_23049739_23049821_23049944_23052472_23052610_23053495_23053750_23054140_23054329_23054505_23054674_23054746_23054867_23055058_23055354_23055532_23055858_23057402
transcript_56232.nnic	chr14	-	2415	12	NIC	ENSG00000139880.21	novel	3415	13	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	15.6368921686573	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGCCCTGCTTCTGTT	-23056264	True	NA	-5	True	AATAAA	-21	NA	23057539	23047066	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_23047375_23049026_23049276_23049626_23049739_23049821_23049944_23052472_23052610_23053495_23053750_23054140_23054329_23054505_23054674_23054746_23054867_23055058_23055354_23055532_23055858_23057402
transcript_56248.known	chr14	-	4173	19	FSM	ENSG00000100813.15	ENST00000555053.5	4173	19	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_15	182.613198446645	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAAGGGTCTTTCACATC	-23095248	False	NA	NA	False	NA	NA	NA	23095383	23059058	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064222_23064354_23064486_23065965_23066009_23069475_23069618_23078150_23078267_23078819_23079039_23079546_23080810_23081747_23081837_23089981_23090102_23090521_23090634_23093478_23093545_23094974
transcript_56251.known	chr14	-	4935	19	FSM	ENSG00000100813.15	ENST00000262710.5	4935	19	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_15	168.303380173358	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTGTGAGTGGCTTTC	NA	False	NA	-6	True	AATAAA	-17	NA	23095614	23058566	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064489_23065965_23066009_23069475_23069618_23078150_23078267_23078819_23079039_23079546_23080810_23081747_23081837_23089981_23090102_23090521_23090634_23093478_23093545_23094974
transcript_56255.nic	chr14	-	4307	18	NIC	ENSG00000100813.15	novel	4460	19	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	114	junction_8	166.90970975672	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGCTTTCTTT	-23088961	True	NA	-3	True	AATAAA	-20	NA	23095139	23058563	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064222_23064354_23064489_23065965_23066009_23069475_23069618_23078150_23078267_23078819_23079039_23079546_23080810_23081747_23081837_23090521_23090634_23093478_23093545_23094974
transcript_56258.known	chr14	-	4815	18	FSM	ENSG00000100813.15	ENST00000457657.5	4815	18	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_15	156.21318943557	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTGTGAGTGGCTTTC	NA	False	NA	-6	True	AATAAA	-17	NA	23095614	23058566	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064489_23065965_23066009_23069475_23069618_23078150_23078267_23078819_23079039_23079546_23080810_23081747_23081837_23090521_23090634_23093478_23093545_23094974
transcript_56269.nic	chr14	-	3278	16	NIC	ENSG00000100813.15	novel	4815	18	NA	NA	-3	187	combination_of_known_junctions	FALSE	canonical	3	114	junction_6	169.212292697664	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGTGAGAAGAAAGGTA	-23088961	True	NA	NA	False	AAGAAA	-2	NA	23095139	23061314	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064222_23064354_23064489_23065965_23066009_23069475_23069618_23078150_23078267_23078819_23079039_23079546_23080810_23081747_23081837_23090521_23090634_23093478_23093545_23094974
transcript_5628.known	chr1	+	2594	4	FSM	ENSG00000198492.16	ENST00000478283.5	2594	4	0	0	0	0	multi-exon	FALSE	canonical	3	1094	junction_2	64.8348328875424	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAAAAAAAGAAAAAGA	28727231	True	NA	NA	False	NA	NA	NA	28736949	28769125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28737683_28738258_28738339_28742402_28743987_28768928
transcript_56280.nic	chr14	-	2498	13	NIC	ENSG00000100813.15	novel	2563	13	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_12	171.429832584647	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGCTTTCTTT	-23067853	True	NA	-3	True	AATAAA	-20	NA	23071585	23058563	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064222_23064354_23064489_23065965_23066009_23069475_23069618_23071124_23071187_23071426
transcript_56289.known	chr14	-	2563	13	FSM	ENSG00000100813.15	ENST00000357481.6	2563	13	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_12	148.522070937472	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTGTGAGTGGCTTTC	-23067885	True	NA	-6	True	AATAAA	-17	NA	23071617	23058566	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064489_23065965_23066009_23069475_23069618_23071124_23071187_23071426
transcript_5629.known	chr1	+	9317	3	FSM	ENSG00000116329.12	ENST00000234961.7	9317	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGGCTGTTTTGTTTGC	28812015	True	NA	11	True	AATAAA	-26	NA	28812169	28871267	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28812611_28858953_28859304_28862741
transcript_56294.nic	chr14	-	2738	12	NIC	ENSG00000100813.15	novel	2751	12	NA	NA	-20	0	intron_retention	FALSE	canonical	3	114	junction_8	145.97560081417	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGCTTTCTTT	-23067853	True	NA	-3	True	AATAAA	-20	NA	23071585	23058563	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064222_23064354_23064489_23065965_23066009_23069475_23069618_23071124
transcript_56295.nic	chr14	-	2436	12	NIC	ENSG00000100813.15	novel	2563	13	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_11	162.884992129898	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGCTTTCTTT	-23067853	True	NA	-3	True	AATAAA	-20	NA	23071585	23058563	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064222_23064354_23064489_23065965_23066009_23069475_23069618_23071426
transcript_56297.known	chr14	-	2738	12	FSM	ENSG00000100813.15	ENST00000397341.7	2738	12	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_11	109.210616140034	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACTTAGTTTTAAACTGT	-23067833	True	NA	-19	True	AATAAA	-4	NA	23071565	23058579	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064489_23065965_23066009_23069475_23069618_23071124
transcript_56298.known	chr14	-	2445	12	FSM	ENSG00000100813.15	ENST00000338631.10	2445	12	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_11	132.429054763124	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTGTGAGTGGCTTTC	-23067829	True	NA	-6	True	AATAAA	-17	NA	23071561	23058566	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064489_23065965_23066009_23069475_23069618_23071426
transcript_56319.known	chr14	-	734	7	FSM	ENSG00000100813.15	ENST00000555566.1	734	7	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_6	188.097492451831	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCATGAAGTAAAGAAAGGT	-23067806	True	NA	72	True	NA	NA	NA	23071538	23063453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23063578_23064104_23064222_23064354_23064489_23065965_23066009_23069475_23069618_23071124_23071187_23071426
transcript_5632.known	chr1	+	5925	21	FSM	ENSG00000159023.22	ENST00000642937.2	5925	21	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	75.3830219611817	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTCTGTGAGGATTGAT	28886152	True	NA	7	True	AATAAA	-16	NA	28887099	29120041	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28887211_28987447_28987906_28993329_28993543_28997214_28997320_29011864_29011908_29015691_29015768_29018223_29018443_29030399_29030488_29033092_29033246_29035825_29035924_29039253_29039427_29053103_29053313_29058588_29058646_29058810_29058853_29060421_29060485_29064981_29065159_29097806_29097936_29109335_29109438_29112367_29112449_29115698_29115804_29116818
transcript_5633.known	chr1	+	6031	21	FSM	ENSG00000159023.22	ENST00000343067.9	6031	21	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_13	68.2058648504658	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTCTGTGAGGATTGAT	28908176	True	NA	7	True	AATAAA	-16	NA	28914568	29120041	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28914769_28987430_28987906_28993329_28993543_28997214_28997320_29011864_29011908_29015691_29015768_29018223_29018443_29030399_29030488_29033092_29033246_29035825_29035924_29039253_29039427_29053103_29053313_29058588_29058646_29058810_29058853_29060421_29060485_29064981_29065159_29097806_29097936_29109335_29109438_29112367_29112449_29115698_29115804_29116818
transcript_56333.known	chr14	+	2914	2	FSM	ENSG00000179933.6	ENST00000319074.6	2914	2	0	0	0	0	multi-exon	FALSE	canonical	3	1222	junction_1	0	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGGACTCCATGGATTTGA	23084139	True	NA	10	True	AATAAA	-15	NA	23095504	23100456	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23095620_23097657
transcript_56337.nic	chr14	-	3925	12	NIC	ENSG00000092068.21	novel	4236	11	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_11	1179.23044663924	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGGTGGTGTTGGTAAT	-23142251	True	NA	27	True	AATAAA	-17	NA	23183663	23125296	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_23127344_23128018_23128197_23129649_23129800_23131460_23131558_23137920_23138025_23139423_23139548_23140470_23140625_23143078_23143205_23165284_23165437_23166335_23166541_23182763_23183039_23183350
transcript_56344.known	chr14	-	4236	11	FSM	ENSG00000092068.21	ENST00000316902.12	4236	11	0	0	0	0	multi-exon	FALSE	canonical	3	3847	junction_2	128.382864900266	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGGTGTTGGTAATTA	-23142248	True	NA	29	True	AATAAA	-19	NA	23183660	23125294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23127344_23128018_23128197_23129649_23129800_23131460_23131558_23137920_23138025_23139423_23139548_23140470_23140625_23143078_23143205_23165284_23165437_23166335_23166541_23182763
transcript_56348.nnic	chr14	-	3149	10	NNC	ENSG00000092068.21	novel	4236	11	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	1288.86737529938	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGGTGGTGTTGGTAAT	-23142251	True	NA	27	True	AATAAA	-17	NA	23183663	23125296	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_-_23127344_23128018_23128197_23129649_23129800_23131460_23131558_23137920_23138025_23139423_23139548_23140470_23140625_23143078_23143205_23165284_23165332_23183541
transcript_56354.known	chr14	-	1752	9	FSM	ENSG00000092068.21	ENST00000453702.5	1752	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_8	1352.84829156857	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCCCTCCCCATCATACC	-23154199	True	NA	NA	False	NA	NA	NA	23154401	23126667	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23127344_23128018_23128197_23129649_23129800_23131460_23131558_23137920_23138025_23139423_23139548_23140470_23140625_23143078_23143205_23154258
transcript_56355.known	chr14	-	1819	9	FSM	ENSG00000092068.21	ENST00000529705.6	1819	9	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_8	1355.48423081938	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGGTCAGCTGGAGAGACC	-23155361	False	NA	NA	False	NA	NA	NA	23155458	23126750	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23127344_23128018_23128197_23129649_23129800_23131460_23131558_23137920_23138025_23139423_23139548_23140470_23140625_23143078_23143205_23155165
transcript_56368.known	chr14	-	3557	6	FSM	ENSG00000092068.21	ENST00000469263.5	3557	6	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_1	1671.29726859108	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAAGTTGGTGGTGTTG	-23142229	True	NA	22	True	AATAAA	-12	NA	23183641	23125301	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23127344_23140470_23140625_23143078_23143205_23165284_23165437_23166335_23166541_23182763
transcript_56369.known	chr14	+	1811	7	FSM	ENSG00000100836.11	ENST00000216727.9	1811	7	0	0	0	0	multi-exon	FALSE	canonical	3	2622	junction_1	219.652503337026	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTGGCCTTTTGGGTGT	23306276	True	NA	8	True	AATAAA	-21	NA	23321456	23326163	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23321821_23322180_23322296_23322998_23323067_23323376_23323484_23323964_23324053_23324137_23324290_23325246
transcript_56370.nnic	chr14	+	865	8	NNC	ENSG00000100836.11	novel	1811	7	NA	NA	-21	35	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1061.96884922991	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAGATGACCTTGATGGA	23321150	True	NA	80	True	ATTAAA	-18	NA	23321435	23325369	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_+_23321516_23321688_23321821_23322180_23322296_23322998_23323067_23323376_23323484_23323964_23324053_23324137_23324290_23325246
transcript_56382.known	chr14	+	2768	6	FSM	ENSG00000100836.11	ENST00000397276.6	2768	6	0	0	0	0	multi-exon	FALSE	canonical	3	2622	junction_1	219.399179579141	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTGGCCTTTTGGGTGT	23306276	True	NA	8	True	AATAAA	-21	NA	23321456	23326163	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23321821_23322180_23322296_23322998_23323067_23323376_23323484_23323964_23324053_23324137
transcript_56383.known	chr14	+	3526	4	FSM	ENSG00000129473.11	ENST00000250405.10	3526	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	9.41629792788369	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTGAACAGGGTTTGTGA	23305247	True	NA	11	True	AATAAA	-25	NA	23306832	23311751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23306895_23307191_23307280_23307759_23308200_23308815
transcript_56385.known	chr14	-	4986	2	FSM	ENSG00000215271.9	ENST00000357460.7	4986	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGATGGAGTCTCGCTC	-23285283	True	NA	NA	False	NA	NA	NA	23286132	23272421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23277188_23285912
transcript_56387.nic	chr14	-	1181	2	ISM	ENSG00000215271.9	ENST00000558278.1	563	3	-464	109	-449	-109	5prime_fragment	FALSE	canonical	3	61	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGATGTAGTGGTGAG	NA	False	NA	-7	True	ATTAAA	-20	NA	23286581	23285099	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_23285612_23285912
transcript_56396.known	chr14	-	2455	10	FSM	ENSG00000092096.19	ENST00000397267.6	2455	10	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	45.4193084518789	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCCTGGACTTCCCTCCC	-23347868	True	NA	-15	True	AATAAA	-26	NA	23352912	23346313	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23346937_23347100_23347213_23347459_23347732_23347890_23347997_23348160_23348307_23348505_23348672_23349271_23349427_23351751_23351856_23351947_23352452_23352645
transcript_56398.nic	chr14	-	3072	10	NIC	ENSG00000092096.19	novel	2372	10	NA	NA	-806	0	intron_retention	FALSE	canonical	3	10	junction_6	58.8729538188634	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGCATATCATAGCCTGGA	NA	False	NA	-25	True	AATAAA	-16	NA	23353718	23346323	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_23346937_23347100_23347213_23347513_23347732_23347890_23347997_23348160_23348307_23348505_23348547_23349271_23349427_23351751_23351856_23351947_23352452_23352645
transcript_56400.known	chr14	-	2238	10	FSM	ENSG00000092096.19	ENST00000354772.10	2372	10	146	-12	119	8	multi-exon	TRUE	canonical	3	127	junction_6	30.9591526983939	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCCCTCCCTTCTGTTT	-23347697	False	NA	-7	True	AATAAA	-34	NA	23352741	23346305	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23346937_23347100_23347213_23347513_23347732_23347890_23347997_23348160_23348307_23348505_23348672_23349271_23349427_23351751_23351856_23351947_23352452_23352645
transcript_56409.known	chr14	-	2245	9	FSM	ENSG00000092096.19	ENST00000397260.7	2245	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_7	59.3083836822418	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCCTGGACTTCCCTCCC	-23347816	True	NA	-15	True	AATAAA	-26	NA	23352860	23346313	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23346937_23347100_23347213_23347513_23347732_23347890_23347997_23348160_23348307_23348505_23348672_23349271_23349427_23351947_23352452_23352645
transcript_56455.known	chr14	-	2653	6	FSM	ENSG00000100842.13	ENST00000216733.8	2653	6	0	0	0	0	multi-exon	TRUE	canonical	3	87	junction_5	13.9942845476287	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGATTCGACATTTGCTG	-23365162	False	2196	-16	True	AATAAA	-14	NA	23365172	23356405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23357661_23358875_23358966_23359316_23360040_23360140_23360282_23360554_23360834_23365007
transcript_56458.known	chr14	-	2704	5	FSM	ENSG00000100842.13	ENST00000351354.3	2704	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	43.2290411644765	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCTTCTTGGGAGCATG	-23365742	False	NA	1	True	AATAAA	-22	NA	23365752	23356655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23357661_23358875_23358966_23359316_23360040_23360140_23360282_23365007
transcript_56461.known	chr14	+	1200	5	FSM	ENSG00000166091.21	ENST00000359320.7	1200	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.29903810567666	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGAGTCTCTTTCTTCC	NA	False	NA	NA	False	ATTAAA	-15	NA	23376807	23379772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23377378_23378348_23378502_23379030_23379124_23379298_23379384_23379473
transcript_56462.nnic	chr14	+	1199	12	NNC	ENSG00000129460.16	novel	1108	11	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_3	344.921167182079	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGCCCCTTTTTGCACA	23462764	True	NA	10	True	AATAAA	-19	NA	23469687	23478173	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_+_23469728_23470041_23470102_23470905_23470978_23471067_23471144_23475170_23475309_23475557_23475643_23475725_23475779_23476028_23476153_23476238_23476408_23477199_23477357_23477502_23477561_23478006
transcript_56463.known	chr14	+	1108	11	FSM	ENSG00000129460.16	ENST00000408901.8	1108	11	0	0	0	0	multi-exon	FALSE	canonical	3	452	junction_1	142.304919099798	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGCCCCTTTTTGCACA	23462779	True	NA	10	True	AATAAA	-19	NA	23469702	23478173	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23469728_23470041_23470102_23470905_23470978_23475170_23475309_23475557_23475643_23475725_23475779_23476028_23476153_23476238_23476408_23477199_23477357_23477502_23477561_23478006
transcript_5649.nic	chr1	+	5933	18	NIC	ENSG00000159023.22	novel	2937	20	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	3	68	junction_12	51.9405435975034	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTCTCTGTGAGGATT	NA	False	NA	4	True	AATAAA	-13	NA	28914501	29120038	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_28914769_28987430_28987906_28993329_28993543_28997214_28997320_29011864_29011908_29015691_29015768_29018223_29018443_29030399_29030488_29033092_29033246_29035825_29035924_29039253_29039427_29053103_29053313_29064981_29065159_29097806_29097936_29109335_29109438_29112367_29112449_29115698_29115804_29116818
transcript_56521.nic	chr14	-	2640	22	NIC	ENSG00000213983.12	novel	2598	22	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_21	87.4608043082696	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGGGTATATTTGAAGT	-23567327	False	NA	-16	True	AATAAA	-33	NA	23567545	23559566	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_23559851_23559937_23560037_23560254_23560419_23561295_23561432_23561511_23561636_23561961_23562067_23562287_23562416_23562503_23562594_23563379_23563503_23563583_23563639_23563715_23563857_23564045_23564160_23564332_23564389_23564561_23564661_23565118_23565200_23565605_23565702_23565815_23565893_23566063_23566161_23566277_23566420_23566561_23566687_23567110_23567320_23567450
transcript_56522.known	chr14	-	2598	22	FSM	ENSG00000213983.12	ENST00000397120.8	2598	22	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_21	70.0703566087932	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGGGTATATTTGAAGT	-23564710	True	NA	-16	True	AATAAA	-33	NA	23567791	23559566	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23559851_23559937_23560037_23560254_23560419_23561295_23561432_23561511_23561636_23561961_23562067_23562287_23562416_23562503_23562594_23563379_23563503_23563583_23563639_23563715_23563857_23564045_23564160_23564332_23564389_23564561_23564661_23565118_23565200_23565605_23565702_23565815_23565893_23566063_23566161_23566277_23566420_23566561_23566687_23567110_23567320_23567738
transcript_5657.nic	chr1	+	2217	14	ISM	ENSG00000159023.22	ENST00000650265.1	4185	17	-67	13318	-42	4337	5prime_fragment	FALSE	canonical	3	39	junction_13	59.2064885297521	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTAGCCATTTTTCACTTT	NA	False	NA	38	True	AAAACA	-43	NA	28914501	29058851	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_28914769_28987430_28987906_28993329_28993543_28997214_28997320_29011864_29011908_29015691_29015768_29018223_29018443_29030399_29030488_29033092_29033246_29035825_29035924_29039253_29039427_29053103_29053313_29058588_29058646_29058810
transcript_5660.nic	chr1	+	2171	13	ISM	ENSG00000159023.22	ENST00000373797.2	2407	15	-72	6581	-42	4126	5prime_fragment	FALSE	canonical	3	74	junction_12	41.2966066671612	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGGTTTGTGCCAATAGG	NA	False	NA	4	True	NA	NA	NA	28914501	29058640	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_28914769_28987430_28987906_28993329_28993543_28997214_28997320_29011864_29011908_29015691_29015768_29018223_29018443_29030399_29030488_29033092_29033246_29035825_29035924_29039253_29039427_29053103_29053313_29058588
transcript_5661.known	chr1	+	2964	13	FSM	ENSG00000159023.22	ENST00000645184.1	2964	13	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_12	42.8727931080877	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAGACCCTGTCTCAAAA	28908233	True	NA	NA	False	NA	NA	NA	28914625	29065950	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_28914769_28987430_28987906_28993329_28993543_28997214_28997320_29011864_29011908_29015691_29015768_29018223_29018443_29030399_29030488_29033092_29033246_29035825_29035924_29039253_29039427_29053103_29053313_29064981
transcript_56627.nic	chr14	-	2547	21	NIC	ENSG00000213983.12	novel	2598	22	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_5	96.8942206738874	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGGGTATATTTGAAGT	-23567835	False	NA	-16	True	AATAAA	-33	NA	23567845	23559566	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_23559851_23559937_23560037_23560254_23560419_23561295_23561432_23561511_23561636_23562287_23562416_23562503_23562594_23563379_23563503_23563583_23563639_23563715_23563857_23564045_23564160_23564332_23564389_23564561_23564661_23565118_23565200_23565605_23565702_23565815_23565893_23566063_23566161_23566277_23566420_23566561_23566687_23567110_23567320_23567738
transcript_5664.nic	chr1	+	2018	12	ISM	ENSG00000159023.22	ENST00000373797.2	2407	15	-72	12010	-42	-1303	5prime_fragment	FALSE	canonical	3	191	junction_1	13.6587694713351	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGGTCCCTAAAGCACAG	NA	False	NA	-85	True	NA	NA	NA	28914501	29053211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_28914769_28987430_28987906_28993329_28993543_28997214_28997320_29011864_29011908_29015691_29015768_29018223_29018443_29030399_29030488_29033092_29033246_29035825_29035924_29039253_29039427_29053103
transcript_5665.nic	chr1	+	2118	12	ISM	ENSG00000159023.22	ENST00000373797.2	2407	15	-72	11910	-42	-1203	5prime_fragment	FALSE	canonical	3	191	junction_1	13.6587694713351	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATGTCATCAGTCCAAAT	NA	False	NA	15	True	NA	NA	NA	28914501	29053311	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_28914769_28987430_28987906_28993329_28993543_28997214_28997320_29011864_29011908_29015691_29015768_29018223_29018443_29030399_29030488_29033092_29033246_29035825_29035924_29039253_29039427_29053103
transcript_5667.nic	chr1	+	1766	11	ISM	ENSG00000159023.22	ENST00000373797.2	2407	15	-72	25939	-42	-15232	5prime_fragment	FALSE	canonical	3	191	junction_1	11.8494725621017	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAATTTCTTGCGCTAGGA	NA	False	NA	NA	False	NA	NA	NA	28914501	29039282	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_28914769_28987430_28987906_28993329_28993543_28997214_28997320_29011864_29011908_29015691_29015768_29018223_29018443_29030399_29030488_29033092_29033246_29035825_29035924_29039253
transcript_5675.nic	chr1	+	818	3	ISM	ENSG00000159023.22	ENST00000373797.2	2407	15	-72	71816	-42	-61109	5prime_fragment	FALSE	canonical	3	191	junction_1	16.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGAAGTAAAAGAAGAAAGC	NA	False	NA	42	True	NA	NA	NA	28914501	28993405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_28914769_28987430_28987906_28993329
transcript_5676.nic	chr1	+	574	2	ISM	ENSG00000159023.22	ENST00000373797.2	2407	15	-72	77484	-42	-66777	5prime_fragment	FALSE	canonical	3	191	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGTAGAGTCAGATAAAGA	NA	False	NA	NA	False	NA	NA	NA	28914501	28987737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_28914769_28987430
transcript_5677.known	chr1	-	2468	2	FSM	ENSG00000253304.2	ENST00000521452.2	2468	2	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	0	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACTGTGGTGTGTCTGAG	-29123216	True	NA	-18	True	AATAAA	-16	NA	29123903	29119428	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_29121849_29123855
transcript_5678.known	chr1	-	2553	2	FSM	ENSG00000253304.2	ENST00000420504.2	2553	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGTTACTGTGGTGTGT	-29122465	False	NA	-23	True	AATAAA	-11	NA	29122501	29119433	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_29121849_29122363
transcript_5679.known	chr1	-	2300	6	FSM	ENSG00000116350.18	ENST00000373795.7	2300	6	0	0	0	0	multi-exon	FALSE	canonical	3	578	junction_1	61.8721261958889	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATGGTGTTTGAATTGA	-29168801	True	NA	-5	True	AATAAA	-22	NA	29181900	29147742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_29149227_29150102_29150193_29154695_29154911_29159373_29159487_29160374_29160518_29181645
transcript_5681.known	chr1	-	1264	5	FSM	ENSG00000116350.18	ENST00000466448.4	1264	5	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	263.705801983953	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTCCGTGTCAAAGGAGCG	-29168783	True	NA	NA	False	NA	NA	NA	29181882	29148670	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_29149227_29154695_29154911_29159373_29159487_29160374_29160518_29181645
transcript_56835.known	chr14	-	4386	7	FSM	ENSG00000092051.18	ENST00000397118.7	4386	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	108.316921833828	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGGGGATTGTCATCTCC	-23577244	True	NA	-4	True	AATAAA	-14	NA	23578785	23568037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23569718_23570927_23571461_23571801_23571921_23575684_23576457_23577074_23577625_23577868_23577995_23578179
transcript_56838.known	chr14	-	4265	6	FSM	ENSG00000092051.18	ENST00000356300.9	4265	6	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_5	50.7133118618771	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGGGGATTGTCATCTCC	-23577249	True	NA	-4	True	AATAAA	-14	NA	23578790	23568037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23569718_23570927_23571461_23571801_23571921_23575684_23576457_23577074_23577625_23578179
transcript_56851.known	chr14	+	569	3	FSM	ENSG00000259431.6	ENST00000554970.1	569	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	11.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACTGTGCCTCTCCCCTC	23555929	True	NA	NA	False	NA	NA	NA	23556270	23558898	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23556344_23556742_23557035_23558694
transcript_56852.known	chr14	+	535	3	FSM	ENSG00000259431.6	ENST00000556015.5	535	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	8	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAAGGGAACTCTGGGTCT	23555929	True	NA	NA	False	NA	NA	NA	23556270	23558859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23556344_23556742_23557040_23558694
transcript_56854.known	chr14	+	1779	3	FSM	ENSG00000259431.6	ENST00000404535.3	1779	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	33.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTTCTCAGGCTTTATT	23555137	True	NA	8	True	AATATA	-17	NA	23556006	23559574	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23556344_23556742_23557305_23558694
transcript_56857.known	chr14	+	571	2	FSM	ENSG00000259431.6	ENST00000555446.1	571	2	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCCTCAGTGTCCCTTC	23555967	False	NA	NA	False	NA	NA	NA	23555987	23558909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23556344_23558694
transcript_56859.known	chr14	+	2611	2	FSM	ENSG00000259431.6	ENST00000288014.7	2611	2	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	0	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAGATGAAATGGGTGACA	23555929	True	NA	NA	False	NA	NA	NA	23556270	23560271	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23557305_23558694
transcript_56862.known	chr14	+	1595	2	FSM	ENSG00000259431.6	ENST00000554789.1	1595	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCACTTCAAATATACCCAA	23555952	False	NA	-23	True	NA	NA	NA	23556293	23559543	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23557040_23558694
transcript_56863.known	chr14	-	9296	10	FSM	ENSG00000136367.15	ENST00000419474.5	9296	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	9.81432563421048	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAAGTGTTTTTTTTCCTA	-23549857	True	NA	-1	True	AATACA	-33	NA	23551765	23520856	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23522942_23523202_23526680_23526846_23526974_23527603_23527805_23529709_23529769_23530119_23530195_23531480_23531722_23532566_23533085_23533284_23535375_23551342
transcript_56866.known	chr14	-	2554	18	FSM	ENSG00000213983.12	ENST00000465445.6	2554	18	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_17	135.831235610496	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCCACAAATAAAGCCCAAT	-23567313	False	NA	-61	True	NA	NA	NA	23567324	23559611	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23559851_23559937_23560037_23560254_23560419_23561295_23561432_23561511_23561636_23561961_23562067_23562287_23562416_23562503_23562594_23563379_23563503_23563583_23563639_23563715_23564222_23564332_23564389_23564561_23564661_23565118_23565200_23565605_23565702_23566063_23566161_23566277_23566420_23567110
transcript_56867.known	chr14	+	1676	9	FSM	ENSG00000100867.15	ENST00000250383.11	1676	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	0.82915619758885	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGGAAGCATCTGTCAAG	23636245	True	NA	6	True	AATAAA	-18	NA	23636363	23645639	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23636773_23638826_23639005_23639178_23639357_23639793_23639896_23643151_23643220_23644110_23644163_23644408_23644544_23644826_23644883_23645141
transcript_56868.known	chr14	-	2759	3	FSM	ENSG00000215256.5	ENST00000555045.2	2759	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	15	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTATGGCTTCTGAGTTT	NA	False	NA	-15	True	AATAAA	-15	NA	23954204	23938739	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23941159_23953773_23954034_23954124
transcript_56871.known	chr14	-	2852	2	FSM	ENSG00000215256.5	ENST00000556379.2	2859	2	7	0	-4	0	multi-exon	FALSE	canonical	3	52	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGAGTTTTGTGTCATG	-23953288	True	NA	-6	True	AATAAA	-24	NA	23954197	23938730	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23941159_23953773
transcript_56876.known	chr14	-	3270	2	FSM	ENSG00000215256.5	ENST00000667602.1	3270	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTTTGTTTATGGCTTC	-23953257	True	NA	-22	True	AATAAA	-8	NA	23954166	23938746	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_23941159_23953308
transcript_56878.known	chr14	+	1264	8	FSM	ENSG00000157326.19	ENST00000313250.10	1264	8	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_5	37.2881772585535	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACCTGTTCATTTCTCAG	23951419	True	NA	NA	False	AATAAA	-31	NA	23953769	23969279	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23953917_23955034_23955213_23959901_23960004_23965761_23965833_23965931_23965984_23966282_23966418_23967210_23967267_23968756
transcript_56879.nic	chr14	+	744	7	ISM	ENSG00000157326.19	ENST00000313250.10	1264	8	-38	2048	-2	-892	5prime_fragment	FALSE	canonical	3	105	junction_5	32.1074584619974	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGGAAAGCATGAAAGAAAC	23951381	True	NA	NA	False	CATAAA	-44	NA	23953731	23967231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_23953917_23955034_23955213_23959901_23960004_23965761_23965833_23965931_23965984_23966282_23966418_23967210
transcript_56881.known	chr14	+	1143	7	FSM	ENSG00000157326.19	ENST00000558581.5	1143	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	61.4455495178907	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACCTGTTCATTTCTCAG	23951438	True	NA	NA	False	AATAAA	-31	NA	23953788	23969279	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23953917_23955034_23955213_23965761_23965833_23965931_23965984_23966282_23966418_23967210_23967267_23968756
transcript_56885.known	chr14	+	727	5	FSM	ENSG00000157326.19	ENST00000397075.7	727	5	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	58.6190028915539	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCCCTGCCGTCAAGGT	23951428	True	NA	NA	False	NA	NA	NA	23953778	23969009	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23953917_23955034_23955213_23959901_23960004_23967210_23967267_23968756
transcript_56887.known	chr14	+	785	4	FSM	ENSG00000157326.19	ENST00000397074.7	785	4	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_2	84.0092587489948	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGAGAGAAGGAACCTGG	23951435	True	NA	NA	False	NA	NA	NA	23953785	23969176	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23953917_23955034_23955213_23967210_23967267_23968756
transcript_56888.known	chr14	+	1258	8	FSM	ENSG00000187630.18	ENST00000335125.11	1258	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	59.2476642095342	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATTGACCTGTTCATTT	23988584	True	NA	NA	False	AATAAA	-26	NA	23988928	24006403	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23989076_23990181_23990360_23995031_23995134_24000862_24000934_24001032_24001085_24001383_24001518_24004336_24004393_24005885
transcript_56892.known	chr14	+	1117	5	FSM	ENSG00000187630.18	ENST00000397071.5	1117	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	78.0032050623563	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACCTGTTCATTTCTCAG	23988473	True	NA	NA	False	AATAAA	-31	NA	23988817	24006408	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_23989076_23990181_23990360_23995031_23995134_24004336_24004393_24005885
transcript_569.known	chr1	-	2004	18	FSM	ENSG00000127054.22	ENST00000527098.5	2004	18	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_16	164.280079853518	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTGGACAGACCCTGG	-1318743	True	NA	NA	False	NA	NA	NA	1324666	1311822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1311925_1312017_1312148_1312225_1312369_1312439_1312502_1312592_1312701_1312786_1312950_1313034_1313125_1313508_1313593_1313731_1313922_1314300_1314366_1314823_1314963_1315403_1315439_1315519_1315619_1319295_1319525_1320455_1320530_1320995_1321094_1323180_1323288_1324580
transcript_5690.nic	chr1	-	1453	11	NIC	ENSG00000116353.16	novel	2515	10	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_9	146.035920238823	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAAGTCATCCCTGTCGA	-29227282	True	NA	-2	True	AATAAA	-24	NA	29230948	29193816	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_29194180_29195940_29196014_29196197_29196259_29200515_29200590_29201942_29202046_29203130_29203234_29206761_29206906_29216004_29216137_29216587_29216686_29220837_29220922_29230730
transcript_56902.known	chr14	+	4589	40	FSM	ENSG00000186648.15	ENST00000342740.6	4589	40	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_34	4.51660680324529	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTCGAGTCTCTGCT	24051699	True	NA	NA	False	AATAAA	-15	NA	24052008	24069729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24052194_24053708_24053804_24054087_24054139_24054241_24054302_24054395_24054512_24054710_24054809_24055065_24055137_24055236_24055311_24055542_24055619_24055700_24055790_24056298_24056394_24056621_24056709_24056914_24057025_24057166_24057245_24057802_24057880_24057959_24058065_24058154_24058225_24058679_24058762_24058889_24058987_24059134_24059190_24059269_24059443_24059663_24059733_24059969_24060064_24060156_24060256_24060627_24060757_24060926_24061041_24061496_24061673_24062479_24062568_24062708_24062847_24063119_24063184_24063324_24063534_24064245_24064347_24064957_24065274_24065621_24065751_24066397_24066465_24066566_24066657_24068583_24068703_24068785_24068967_24069136_24069248_24069378
transcript_56919.nic	chr14	+	2957	16	NIC	ENSG00000100897.18	novel	4304	15	NA	NA	-16	0	intron_retention	TRUE	canonical	3	78	junction_2	95.2615114070502	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGTGTCTGTCTCTCTC	NA	False	NA	16	True	AATAAA	-16	NA	24114760	24124029	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_24115294_24115381_24115393_24115542_24115750_24116916_24117045_24117265_24117394_24117667_24117733_24118054_24118156_24118387_24118535_24118749_24118805_24119144_24119214_24119558_24119617_24119710_24119897_24120837_24120992_24121364_24121518_24122970_24123078_24123174
transcript_56923.known	chr14	+	2570	15	FSM	ENSG00000100897.18	ENST00000326009.9	2570	15	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	102.973941621467	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGTGTCTGTCTCTCTC	24113051	True	NA	16	True	AATAAA	-16	NA	24115274	24124029	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24115294_24115381_24115727_24116916_24117045_24117265_24117394_24117667_24117733_24118054_24118156_24118387_24118535_24118749_24118805_24119144_24119214_24119558_24119617_24119710_24119897_24120837_24120992_24121364_24121518_24122970_24123078_24123174
transcript_56925.known	chr14	+	4304	15	FSM	ENSG00000100897.18	ENST00000446197.8	4304	15	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_1	61.9410516342031	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGGCTTCTGTGTTCTC	24110753	True	NA	12	True	AATAAA	-24	NA	24114776	24125242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24115294_24115381_24115750_24116916_24117045_24117265_24117394_24117667_24117733_24118054_24118156_24118387_24118535_24118749_24118805_24119144_24119214_24119558_24119617_24119710_24119897_24120837_24120992_24121364_24121518_24122970_24123078_24123174
transcript_56953.known	chr14	+	2179	10	FSM	ENSG00000100889.12	ENST00000216780.9	2179	10	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_7	27.8159737392335	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGATTTGTGCTGTTTT	24087919	True	NA	13	True	NA	NA	NA	24094310	24104125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24094435_24096891_24097138_24098202_24098388_24098474_24098679_24099048_24099237_24099557_24099721_24099994_24100214_24102752_24102891_24103159_24103256_24103509
transcript_56964.known	chr14	+	2505	10	FSM	ENSG00000100889.12	ENST00000545054.6	2505	10	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	83.9617784882715	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATGAGCAATTTGATA	24087909	True	NA	-82	True	NA	NA	NA	24094300	24104030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24094846_24096891_24097138_24098202_24098388_24098474_24098679_24099048_24099237_24099557_24099721_24099994_24100214_24102752_24102891_24103159_24103256_24103509
transcript_56965.nic	chr14	+	2262	9	NIC	ENSG00000100889.12	novel	2433	9	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	2	48	junction_8	75.4453444554401	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTGCTGTTTTCATTT	NA	False	NA	18	True	NA	NA	NA	24094136	24104130	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_24094435_24096891_24097138_24098202_24098388_24098474_24098679_24099048_24099237_24099557_24099721_24099994_24100214_24102752_24102891_24103509
transcript_56966.nnic	chr14	+	2069	9	NIC	ENSG00000100889.12	novel	2179	10	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_6	82.996987897152	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGATTTGTGCTGTTTT	24094070	True	NA	13	True	NA	NA	NA	24094201	24104125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_24094435_24096891_24097138_24098202_24098388_24098474_24098679_24099048_24099237_24099557_24099721_24102752_24102891_24103159_24103256_24103509
transcript_5697.known	chr1	-	2515	10	FSM	ENSG00000116353.16	ENST00000263702.11	2515	10	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_9	38.6353640855718	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGGTGTCTCCCTTATCA	-29227268	True	NA	NA	False	NA	NA	NA	29230934	29192656	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_29194180_29195940_29196014_29196197_29196259_29200515_29200590_29201942_29202046_29203130_29203234_29206761_29206906_29216004_29216137_29216587_29216686_29230730
transcript_56977.known	chr14	+	1830	7	FSM	ENSG00000100889.12	ENST00000396973.8	1830	7	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_6	27.8612634315101	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGGCTGGATTTTTTTTT	NA	False	NA	NA	False	AATAAA	-1	NA	24094158	24100562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24094435_24096891_24097138_24098202_24098388_24098474_24098679_24099048_24099237_24099557_24099721_24099994
transcript_5698.known	chr1	-	2416	10	FSM	ENSG00000116353.16	ENST00000373791.7	2416	10	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_9	106.842678853964	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGACTAATGCTGTAAAGA	-29227258	True	NA	-4	True	ATTAAA	-22	NA	29230924	29192872	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_29194180_29195940_29196014_29196197_29196259_29200515_29200590_29201942_29202046_29203130_29203234_29206761_29206906_29216004_29216137_29216587_29216813_29230730
transcript_56983.known	chr14	-	3543	3	FSM	ENSG00000129535.13	ENST00000561028.6	3543	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTTGTTGCTGATGT	-24114789	True	NA	NA	False	CATAAA	-25	NA	24114949	24078661	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24081569_24082467_24082876_24114721
transcript_56984.known	chr14	+	2402	15	FSM	ENSG00000100897.18	ENST00000396941.8	2402	15	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	123.473454141168	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGTGTCTGTCTCTCTC	24114983	True	NA	16	True	AATAAA	-16	NA	24115325	24124029	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24115393_24115542_24115727_24116971_24117045_24117265_24117394_24117667_24117733_24118054_24118156_24118387_24118535_24118749_24118805_24119144_24119214_24119558_24119617_24119710_24119897_24120837_24120992_24121364_24121518_24122970_24123078_24123174
transcript_56985.known	chr14	+	2469	13	FSM	ENSG00000100897.18	ENST00000396936.5	2469	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	115.575973089373	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCCTCTCACTGGCTTTGG	24115334	False	NA	-32	True	NA	NA	NA	24115373	24123981	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24115750_24116916_24117045_24117265_24117394_24118054_24118156_24118387_24118535_24118749_24118805_24119144_24119214_24119558_24119617_24119710_24119897_24120837_24120992_24121364_24121518_24122970_24123078_24123174
transcript_56989.known	chr14	+	945	11	FSM	ENSG00000092010.15	ENST00000561435.5	945	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	243.141543138971	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAAGTCTCTTTATTGGA	24129670	True	NA	24	True	AATAAA	-24	NA	24136226	24138967	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24136302_24136984_24137018_24137142_24137206_24137320_24137432_24137519_24137566_24137699_24137798_24138048_24138118_24138195_24138264_24138344_24138400_24138473_24138569_24138735
transcript_56993.known	chr14	+	1136	10	FSM	ENSG00000092010.15	ENST00000382708.7	1136	10	0	0	0	0	multi-exon	FALSE	canonical	3	748	junction_4	38.146242311257	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCCAAGTCTCTTTATT	24129643	True	NA	21	True	AATAAA	-21	NA	24136199	24138964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24136302_24136984_24137018_24137142_24137206_24137320_24137432_24137519_24137566_24137699_24137798_24138048_24138118_24138195_24138264_24138344_24138400_24138473
transcript_56995.known	chr14	+	865	10	FSM	ENSG00000092010.15	ENST00000561142.5	865	10	0	0	0	0	multi-exon	FALSE	canonical	3	748	junction_4	679.492966378626	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGGAGAAACAAAGGGAATG	24129640	True	NA	NA	False	NA	NA	NA	24136196	24138787	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24136302_24136984_24137018_24137142_24137206_24137320_24137432_24137519_24137566_24137699_24137798_24138048_24138264_24138344_24138400_24138473_24138561_24138735
transcript_57.known	ERCC-00157	+	1003	1	FSM	ERCC-00157A	DQ839618	1003	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1003	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00157_+_0_1000
transcript_57003.known	chr14	-	838	6	FSM	ENSG00000100908.14	ENST00000216799.9	838	6	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_5	70.7021923281025	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAGTGGTATAACTATA	-24140607	False	4372	-10	True	AATAAA	-15	NA	24141591	24138964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24139197_24139359_24139455_24139544_24139615_24140888_24140966_24141106_24141317_24141437
transcript_57006.nic	chr14	-	1077	6	NIC	ENSG00000100908.14	novel	838	6	NA	NA	-64	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_3	125.501553775242	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAGTGGTATAACTATA	-24140671	False	NA	-10	True	AATAAA	-15	NA	24141655	24138964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_24139197_24139359_24139455_24139544_24139790_24140888_24140966_24141106_24141317_24141437
transcript_57007.known	chr14	-	771	6	FSM	ENSG00000100908.14	ENST00000560600.1	771	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	147.888606728172	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCACCTTGTGGACTTTGA	-24140503	False	4372	NA	False	NA	NA	NA	24141487	24139129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24139197_24139359_24139455_24139544_24139817_24140888_24140966_24141106_24141317_24141437
transcript_57008.known	chr14	-	953	5	FSM	ENSG00000100908.14	ENST00000419198.6	953	5	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_2	28.3460755661167	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAGTGGTATAACTATA	-24140601	False	4372	-10	True	AATAAA	-15	NA	24141585	24138964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24139197_24139359_24139455_24139544_24139615_24140888_24140966_24141106
transcript_57009.nic	chr14	-	1198	5	NIC	ENSG00000100908.14	novel	953	5	NA	NA	-64	0	intron_retention	FALSE	canonical	3	76	junction_3	134.351218825882	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAGTGGTATAACTATA	-24140671	False	NA	-10	True	AATAAA	-15	NA	24141655	24138964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_24139197_24139359_24139455_24139544_24139790_24140888_24140966_24141106
transcript_57010.known	chr14	-	872	5	FSM	ENSG00000100908.14	ENST00000560403.5	872	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	154.180089505746	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAGTGGTATAACTATA	-24140586	False	4372	-10	True	AATAAA	-15	NA	24141570	24138964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24139197_24139359_24139455_24139544_24139790_24140888_24140966_24141347
transcript_57013.nic	chr14	+	374	4	ISM	ENSG00000092010.15	ENST00000561142.5	865	10	-63	1357	-29	-331	5prime_fragment	FALSE	canonical	3	756	junction_3	28.7672653471886	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAAGCTGGGAAGACCTGG	24129577	True	NA	15	True	AAGAAA	-9	NA	24136133	24137430	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_24136302_24136984_24137018_24137142_24137206_24137320
transcript_57023.known	chr14	+	3502	21	FSM	ENSG00000092098.17	ENST00000324103.11	3502	21	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_6	22.9878228634205	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGGCTTCTTGGTGGTCC	24143436	True	NA	15	True	AATAAA	-15	NA	24147497	24160655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24147891_24147975_24148123_24148257_24148414_24148641_24148702_24148800_24148877_24149405_24149584_24150060_24150449_24150597_24150889_24151130_24151380_24151484_24151671_24151785_24151993_24155156_24155331_24155413_24155513_24155602_24155693_24157289_24157405_24157519_24157639_24157897_24158012_24158141_24158200_24159863_24159961_24160238_24160408_24160519
transcript_57026.nic	chr14	+	3971	21	NIC	ENSG00000092098.17	novel	3502	21	NA	NA	-14	0	combination_of_known_junctions	TRUE	canonical	3	10	junction_8	31.16003048779	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGGCTTCTTGGTGGTCC	24146826	False	NA	15	True	AATAAA	-15	NA	24146860	24160655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_24147891_24147975_24148123_24148257_24148414_24148641_24148702_24148800_24148877_24149405_24149584_24150060_24150449_24150597_24150889_24151298_24151380_24151484_24151671_24151785_24151993_24155156_24155331_24155413_24155513_24155602_24155693_24157289_24157405_24157519_24157639_24157897_24158012_24158141_24158200_24159863_24159961_24160238_24160408_24160519
transcript_57035.known	chr14	+	3198	21	FSM	ENSG00000092098.17	ENST00000559275.5	3198	21	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	39.071217027372	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTCTTGGTGGTCCTTCT	24146676	True	NA	19	True	AATAAA	-19	NA	24146886	24160659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24146908_24147975_24148123_24148257_24148478_24148641_24148702_24148800_24148877_24149405_24149584_24150060_24150449_24150597_24150889_24151130_24151380_24151484_24151671_24151785_24151993_24155156_24155331_24155413_24155513_24155602_24155693_24157289_24157405_24157519_24157639_24157897_24158012_24158141_24158200_24159863_24159961_24160238_24160408_24160519
transcript_57057.known	chr14	-	793	11	FSM	ENSG00000100911.16	ENST00000216802.10	793	11	0	0	0	0	multi-exon	FALSE	canonical	3	1223	junction_6	162.041229321429	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTTCTGGCGTGTGTCA	-24142238	True	NA	-21	True	AATAAA	-21	NA	24146610	24143364	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24143490_24143584_24143672_24143974_24144030_24144191_24144260_24144399_24144469_24145057_24145156_24145242_24145274_24145378_24145466_24145709_24145773_24146207_24146241_24146533
transcript_57058.known	chr14	-	1502	11	FSM	ENSG00000100911.16	ENST00000558273.5	1502	11	0	0	0	0	multi-exon	TRUE	canonical	3	45	junction_9	502.1080063094	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGGACTAGAAGGAAAATAAA	-24146251	True	NA	-61	True	AAGAAA	-22	NA	24147235	24143404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24143490_24143584_24143672_24143974_24144030_24144191_24144260_24144399_24144469_24145057_24145156_24145242_24145274_24145378_24145466_24145709_24145897_24146207_24146241_24146533
transcript_57060.known	chr14	-	755	10	FSM	ENSG00000100911.16	ENST00000560410.5	755	10	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_9	507.059277709334	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTTCTGGCGTGTGTCA	-24142233	True	NA	-21	True	AATAAA	-21	NA	24146605	24143364	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24143490_24143584_24143672_24143974_24144030_24144191_24144260_24144399_24144469_24145057_24145156_24145242_24145274_24145378_24145466_24145709_24145773_24146533
transcript_57074.known	chr14	+	1626	9	FSM	ENSG00000213928.9	ENST00000396864.8	1626	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_7	15.9921855917195	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTATCTGATTTTCTGGG	24160769	True	NA	10	True	AATAAA	-19	NA	24161264	24166565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24161339_24162143_24162325_24162965_24163150_24163377_24163509_24163877_24163960_24164062_24164135_24164613_24164956_24165846_24165963_24166121
transcript_57080.known	chr14	-	3498	30	FSM	ENSG00000196497.17	ENST00000354464.11	3498	30	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_25	36.9999839316095	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTGAGAGCAAGAAGGCT	-24180324	True	NA	-14	True	AATAAA	-28	NA	24188816	24180218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24180573_24180688_24180759_24181512_24181618_24181710_24181844_24181954_24182164_24182277_24182404_24182791_24182843_24182975_24183170_24183249_24183356_24183455_24183514_24183589_24183668_24183782_24183899_24183997_24184110_24184297_24184419_24184649_24184764_24184866_24184981_24185182_24185313_24185458_24185568_24185860_24185971_24186128_24186183_24186286_24186452_24186707_24186792_24186877_24186980_24187084_24187151_24187399_24187580_24187666_24187797_24188215_24188258_24188343_24188424_24188551_24188639_24188718
transcript_57087.known	chr14	-	3485	30	FSM	ENSG00000196497.17	ENST00000560155.5	3485	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	78.6373847972621	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCTGTCCCTGAGGCTGG	-24180377	True	NA	-100	True	NA	NA	NA	24188869	24180304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24180573_24180688_24180759_24181512_24181618_24181710_24181844_24181954_24182164_24182277_24182424_24182791_24182843_24182975_24183170_24183249_24183356_24183455_24183514_24183589_24183668_24183782_24183899_24183997_24184110_24184297_24184419_24184649_24184764_24184866_24184981_24185182_24185313_24185458_24185568_24185860_24185971_24186128_24186183_24186286_24186452_24186707_24186792_24186877_24186980_24187084_24187151_24187399_24187580_24187666_24187797_24188215_24188258_24188343_24188424_24188551_24188639_24188718
transcript_57127.known	chr14	+	2405	20	FSM	ENSG00000100918.14	ENST00000620473.4	2405	20	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	25.2619517255922	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTCATGACTCATTTGT	NA	False	NA	14	True	AAAACA	-20	NA	24171852	24180257	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24172366_24172466_24172609_24172712_24172782_24172898_24173042_24173125_24173199_24173290_24173412_24175542_24175625_24176821_24176902_24177140_24177223_24177352_24177384_24177464_24177542_24177708_24177759_24178090_24178223_24178605_24178673_24178776_24178917_24179084_24179134_24179396_24179464_24179594_24179727_24179799_24179907_24180009
transcript_57131.nic	chr14	+	2219	20	NIC	ENSG00000100918.14	novel	2405	20	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	41.6350720472144	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGATGTCATGACTCATT	24169393	True	NA	11	True	AAAACA	-17	NA	24172010	24180254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_24172366_24172491_24172609_24172712_24172782_24172898_24173042_24173125_24173199_24173290_24173412_24175542_24175625_24176821_24176902_24177140_24177223_24177352_24177384_24177464_24177542_24177708_24177759_24178090_24178223_24178605_24178673_24178776_24178917_24179084_24179134_24179396_24179464_24179594_24179727_24179799_24179907_24180009
transcript_57154.known	chr14	-	1938	6	FSM	ENSG00000100926.15	ENST00000524835.5	1938	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	80.7727676881262	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTATTGCTGTTCTCTCCC	-24193208	True	NA	NA	False	NA	NA	NA	24195637	24189400	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24189809_24190379_24190654_24192170_24192357_24192647_24193270_24194674_24194831_24195345
transcript_57157.nic	chr14	-	2453	6	NIC	ENSG00000100926.15	novel	2200	6	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_5	74.1161251010871	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCATGCAGTTGGAGGTT	-24193228	True	NA	-9	True	AATAAA	-16	NA	24195657	24189148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_24189809_24190379_24190654_24192170_24192357_24192647_24193270_24194674_24195037_24195308
transcript_5716.known	chr1	-	571	4	FSM	ENSG00000116353.16	ENST00000483435.5	571	4	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_3	38.5082963644055	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAAGTCATCCCTGTCGA	NA	False	NA	-2	True	AATAAA	-24	NA	29200589	29193816	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_29194180_29195940_29196014_29196197_29196259_29200515
transcript_57161.known	chr14	-	1266	6	FSM	ENSG00000254505.11	ENST00000533523.6	1266	6	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_3	266.128089460696	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTCTCTTTGATAGCAG	-24213801	False	NA	-94	True	NA	NA	NA	24213830	24209674	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24209936_24210347_24210484_24210653_24210769_24211410_24211593_24211679_24211830_24213408
transcript_57164.known	chr14	-	723	6	FSM	ENSG00000213920.9	ENST00000288087.12	723	6	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_5	6.8818602136341	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACAGTGTGGGGAGTTTC	-24213600	True	NA	-9	True	ATTAAA	-31	NA	24216066	24213942	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24214152_24214309_24214396_24214491_24214600_24215551_24215663_24215736_24215798_24215918
transcript_57169.known	chr14	-	651	5	FSM	ENSG00000129559.13	ENST00000531430.5	651	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	2074.19845964652	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGGAATCTTTCTTCTG	-24204037	True	NA	-26	True	AATAAA	-13	NA	24232325	24216865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24217224_24218132_24218216_24218383_24218432_24231651_24231738_24232249
transcript_57173.known	chr14	-	626	4	FSM	ENSG00000129559.13	ENST00000396828.8	626	4	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	1845.066274028	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCTTCTGTTGCACAAG	-24204015	True	NA	-17	True	AATAAA	-22	NA	24232303	24216856	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24217224_24218058_24218216_24218383_24218432_24232249
transcript_57174.known	chr14	-	616	4	FSM	ENSG00000129559.13	ENST00000250495.10	616	4	0	0	0	0	multi-exon	FALSE	canonical	3	3882	junction_3	160.188083895845	1230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCTTCTGTTGCACAAG	-24204079	True	NA	-17	True	AATAAA	-22	NA	24232367	24216856	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24217224_24218132_24218216_24218383_24218432_24232249
transcript_57176.known	chr14	-	1065	3	FSM	ENSG00000100926.15	ENST00000530468.5	1065	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	110.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGTGTGCTTCGGAATGAC	-24193155	True	NA	50	True	NA	NA	NA	24195584	24192842	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24193270_24194674_24195037_24195308
transcript_5718.known	chr1	+	5550	30	FSM	ENSG00000060656.20	ENST00000428026.6	5550	30	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_20	42.2836523170589	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTCTCACCAGCCTGA	29232811	True	NA	31	True	AATAAA	-32	NA	29236548	29326813	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_29236718_29255274_29255407_29258504_29258777_29259260_29259343_29259448_29259565_29259869_29260045_29260609_29260904_29275447_29275757_29279011_29279122_29279455_29279658_29280038_29280142_29282675_29282950_29283939_29283977_29284730_29284870_29291868_29292027_29303854_29304046_29304773_29304850_29305351_29305429_29310743_29310781_29311455_29311545_29311642_29311760_29312551_29312707_29315371_29315508_29316001_29316152_29317747_29317922_29320684_29320826_29323370_29323497_29323630_29323789_29325190_29325327_29325598
transcript_57183.known	chr14	-	653	3	FSM	ENSG00000129559.13	ENST00000524927.1	653	3	0	0	0	0	multi-exon	FALSE	canonical	3	3882	junction_2	119.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGTTTAAAGTTAGAAGAAA	-24204066	True	NA	NA	False	NA	NA	NA	24232354	24217715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24218216_24218383_24218432_24232249
transcript_57185.known	chr14	+	2276	19	FSM	ENSG00000100918.14	ENST00000611366.5	2276	19	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_12	22.8549505672644	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGATGTCATGACTCATT	24169462	True	NA	11	True	AAAACA	-17	NA	24172079	24180254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24172609_24172712_24172782_24172898_24173042_24173125_24173199_24173290_24173412_24175542_24175625_24176821_24176902_24177140_24177223_24177352_24177384_24177464_24177542_24177708_24177759_24178090_24178223_24178605_24178673_24178776_24178917_24179084_24179134_24179396_24179464_24179594_24179727_24179799_24179907_24180009
transcript_57186.known	chr14	-	3540	30	FSM	ENSG00000196497.17	ENST00000558780.5	3540	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	103.53390708732	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTCTGAGAGCAAGAAGGC	-24180330	True	NA	-15	True	AATAAA	-27	NA	24188822	24180219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24180573_24180688_24180759_24181512_24181618_24181710_24181844_24181954_24182164_24182277_24182424_24182791_24182843_24182975_24183170_24183249_24183356_24183455_24183514_24183589_24183668_24183782_24183899_24183997_24184110_24184297_24184419_24184649_24184764_24184866_24184981_24185182_24185313_24185458_24185568_24185860_24185971_24186128_24186183_24186286_24186452_24186707_24186792_24186877_24186980_24187084_24187151_24187399_24187580_24187666_24187814_24188215_24188258_24188343_24188424_24188551_24188639_24188718
transcript_57187.known	chr14	-	2200	6	FSM	ENSG00000100926.15	ENST00000261789.9	2200	6	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_2	29.5499576987853	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCATGCAGTTGGAGGTT	-24193012	False	NA	-9	True	AATAAA	-16	NA	24195441	24189148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24189809_24190379_24190654_24192170_24192357_24192647_24193270_24194674_24195037_24195345
transcript_57188.known	chr14	-	889	4	FSM	ENSG00000213920.9	ENST00000530222.5	889	4	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	3.39934634239519	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACAGTGTGGGGAGTTTC	-24213571	True	NA	-9	True	ATTAAA	-31	NA	24216037	24213942	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24214152_24214309_24214396_24214491_24214600_24215551
transcript_57189.known	chr14	-	3632	29	FSM	ENSG00000196497.17	ENST00000561090.5	3632	29	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_25	37.5437160153986	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTGAGAGCAAGAAGGCT	-24180330	True	NA	-14	True	AATAAA	-28	NA	24188822	24180218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24180573_24180688_24180759_24181512_24181618_24181710_24181844_24181954_24182164_24182277_24182404_24182791_24182843_24182975_24183170_24183249_24183356_24183455_24183514_24183589_24183668_24183782_24183899_24183997_24184110_24184297_24184419_24184649_24184764_24184866_24184981_24185182_24185313_24185458_24185568_24185860_24185971_24186128_24186183_24186286_24186452_24186707_24186792_24186877_24186980_24187084_24187151_24187399_24187580_24187666_24187797_24188215_24188258_24188343_24188639_24188718
transcript_5719.known	chr1	+	5573	30	FSM	ENSG00000060656.20	ENST00000373779.8	5573	30	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_20	42.3429180744344	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGCAGCCCTGTGTGTGT	29232784	True	NA	18	True	AATAAA	-19	NA	29236521	29326800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_29236718_29255274_29255407_29258504_29258777_29259260_29259343_29259448_29259565_29259869_29260045_29260609_29260904_29275447_29275757_29279011_29279122_29279455_29279658_29280038_29280142_29282675_29282950_29283939_29283977_29284730_29284870_29291868_29292027_29303854_29304046_29304773_29304850_29305351_29305429_29310743_29310781_29311455_29311554_29311642_29311760_29312551_29312707_29315371_29315508_29316001_29316152_29317747_29317922_29320684_29320826_29323370_29323497_29323630_29323789_29325190_29325327_29325598
transcript_57190.known	chr14	-	2107	6	FSM	ENSG00000100926.15	ENST00000529332.5	2107	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	83.7458058651298	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTTTTTACAATTACC	-24193024	False	NA	-52	True	NA	NA	NA	24195453	24189191	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24189809_24190379_24190592_24192170_24192357_24192647_24193270_24194674_24195037_24195345
transcript_57191.known	chr14	-	2055	5	FSM	ENSG00000100926.15	ENST00000396854.8	2055	5	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	30.4333287696236	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACAAGATCCCTGCCCTC	-24193189	True	NA	-16	True	AATAAA	-12	NA	24195618	24190041	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24190654_24192170_24192357_24192647_24193270_24194674_24195037_24195345
transcript_57197.known	chr14	+	1562	10	FSM	ENSG00000100938.19	ENST00000559910.5	1562	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	107.895010697128	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATACCTCAATAAAGAGA	24232229	False	NA	-25	True	AAAAAG	-22	NA	24232635	24239204	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24232789_24233218_24233341_24233478_24233599_24235736_24235821_24235966_24236042_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
transcript_57198.known	chr14	+	1893	10	FSM	ENSG00000100938.19	ENST00000559836.5	1893	10	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	76.5738568674424	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGCTGGGGCTTTCTGT	24232416	False	NA	13	True	AATAAA	-23	NA	24232441	24239242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24232789_24233218_24233341_24233478_24233599_24235736_24235821_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
transcript_57200.known	chr14	+	1972	10	FSM	ENSG00000100938.19	ENST00000355299.8	1972	10	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	81.6874501142791	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGCTGGGGCTTTCTGT	24232409	False	NA	13	True	AATAAA	-23	NA	24232421	24239242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24232848_24233218_24233341_24233478_24233599_24235736_24235821_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
transcript_57204.known	chr14	+	1595	10	FSM	ENSG00000100938.19	ENST00000399440.7	1595	10	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	66.159925955741	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGCTGGGGCTTTCTGT	24230746	True	NA	13	True	AATAAA	-23	NA	24232928	24239242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24232978_24233218_24233341_24233478_24233599_24235736_24235821_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
transcript_57210.known	chr14	+	1484	9	FSM	ENSG00000100938.19	ENST00000456667.7	1484	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	113.471362025843	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTAAAGAGATGCTGGGG	24230765	True	NA	5	True	AATAAA	-15	NA	24232947	24239234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24232978_24233218_24233341_24233478_24233599_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
transcript_57217.known	chr14	+	1864	9	FSM	ENSG00000100938.19	ENST00000420554.6	1864	9	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_2	24.2950612265127	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGCTGGGGCTTTCTGT	24230718	True	NA	13	True	AATAAA	-23	NA	24232900	24239242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24233341_24233478_24233599_24235736_24235821_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
transcript_57219.known	chr14	-	1801	9	FSM	ENSG00000092330.18	ENST00000267415.12	1801	9	0	0	0	0	multi-exon	TRUE	canonical	3	70	junction_1	65.1843539509291	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGCCTTGATGTGAAGGA	-24240706	True	NA	-7	True	ATTAAA	-18	NA	24242623	24239642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24239932_24240063_24240156_24240262_24240331_24240418_24240876_24241019_24241117_24241203_24241312_24241674_24241777_24241889_24241995_24242140
transcript_57222.nic	chr14	-	1971	8	NIC	ENSG00000092330.18	novel	1801	9	NA	NA	2	0	intron_retention	FALSE	canonical	3	70	junction_2	60.6333914874082	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGCCTTGATGTGAAGGA	-24240744	True	NA	-7	True	ATTAAA	-18	NA	24242661	24239642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_24240156_24240262_24240331_24240418_24240876_24241019_24241117_24241203_24241312_24241674_24241777_24241889_24241995_24242140
transcript_57226.known	chr14	-	2168	6	FSM	ENSG00000092330.18	ENST00000399423.8	2168	6	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_3	13.42236938845	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGCCTTGATGTGAAGGA	-24240746	True	NA	-7	True	ATTAAA	-18	NA	24242663	24239642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24240876_24241019_24241117_24241203_24241312_24241674_24241777_24241889_24241995_24242140
transcript_57228.known	chr14	-	1874	4	FSM	ENSG00000092330.18	ENST00000558566.1	1874	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	100.943328435095	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTAATCCTTAATAATTA	-24240696	True	NA	-46	True	AATGAA	-45	NA	24242613	24239681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24240876_24241674_24241777_24241889_24241995_24242140
transcript_57229.known	chr14	-	2744	15	FSM	ENSG00000092295.12	ENST00000206765.11	2744	15	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	2.51931315550691	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCTCTGTCCATCTT	-24261775	False	NA	NA	False	AATAAA	-16	NA	24263177	24249113	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24249542_24254151_24254289_24254663_24254825_24254971_24255254_24255363_24255518_24255988_24256078_24258284_24258389_24258534_24258674_24259074_24259250_24259703_24259812_24259939_24260059_24260449_24260699_24261694_24261884_24262033_24262355_24263088
transcript_57235.known	chr14	-	1883	17	FSM	ENSG00000100949.15	ENST00000558376.5	1883	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	35.4113660249079	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCTCTCAGGCTACCAAG	-24270147	True	NA	-21	True	AATAAA	-10	NA	24271549	24265556	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24265764_24266429_24266518_24266775_24266890_24267659_24267777_24267865_24267959_24268109_24268199_24268368_24268421_24268513_24268620_24268724_24268827_24268910_24268994_24269079_24269164_24269490_24269695_24269952_24270141_24270333_24270459_24270836_24270948_24271112_24271170_24271486
transcript_57236.known	chr14	-	1963	17	FSM	ENSG00000100949.15	ENST00000559974.5	1963	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	42.1225889517727	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTCTCAGGCTACCAAGC	-24270147	True	NA	-20	True	AATAAA	-11	NA	24271549	24265555	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24265764_24266429_24266518_24266775_24266890_24267659_24267777_24267865_24267959_24268109_24268199_24268368_24268421_24268513_24268620_24268724_24268827_24268910_24268994_24269079_24269164_24269490_24269695_24269952_24270141_24270333_24270459_24270836_24270948_24271112_24271249_24271486
transcript_5724.nic	chr1	+	4724	25	NIC	ENSG00000060656.20	novel	1590	14	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	43.2187387020954	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGCAGCCCTGTGTGTGT	29259385	True	NA	18	True	AATAAA	-19	NA	29260134	29326800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_29260268_29260609_29260904_29275447_29275757_29279011_29279122_29279455_29279658_29280038_29280142_29282675_29282950_29283939_29283977_29284730_29284870_29291868_29292027_29303854_29304046_29304773_29304850_29305351_29305429_29310743_29310781_29311455_29311545_29311642_29311760_29312551_29312707_29315371_29315508_29316001_29316152_29317747_29317922_29320684_29320826_29323370_29323497_29323630_29323789_29325190_29325327_29325598
transcript_57243.known	chr14	-	2265	16	FSM	ENSG00000100949.15	ENST00000399409.7	2265	16	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_12	16.7788226311887	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGTCGCTGCTATCAC	-24270197	True	NA	-2	True	AATAAA	-29	NA	24271599	24265537	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24265764_24266429_24266518_24266775_24266890_24267659_24267777_24267869_24267959_24268109_24268199_24268368_24268421_24268513_24268620_24268724_24268827_24268910_24268994_24269079_24269164_24269490_24269695_24269952_24270141_24270333_24270459_24270836_24270948_24271112
transcript_5725.nic	chr1	+	4733	25	NIC	ENSG00000060656.20	novel	1590	14	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	43.2980625689213	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGCAGCCCTGTGTGTGT	29259385	True	NA	18	True	AATAAA	-19	NA	29260134	29326800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_29260268_29260609_29260904_29275447_29275757_29279011_29279122_29279455_29279658_29280038_29280142_29282675_29282950_29283939_29283977_29284730_29284870_29291868_29292027_29303854_29304046_29304773_29304850_29305351_29305429_29310743_29310781_29311455_29311554_29311642_29311760_29312551_29312707_29315371_29315508_29316001_29316152_29317747_29317922_29320684_29320826_29323370_29323497_29323630_29323789_29325190_29325327_29325598
transcript_57265.known	chr14	-	1427	9	FSM	ENSG00000157379.14	ENST00000288111.12	1427	9	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	9.10957600550102	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTTGACTGCTGATT	-24299097	True	NA	-4	True	AATAAA	-20	NA	24299780	24290597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24290996_24291138_24291220_24291555_24291626_24292183_24292331_24292651_24292785_24296508_24296589_24296737_24296882_24298956_24299131_24299580
transcript_57269.known	chr14	-	2027	7	FSM	ENSG00000157379.14	ENST00000561273.5	2027	7	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	7.11219609778396	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTCTTGGAGCTAATAAAA	-24299078	True	NA	-42	True	NA	NA	NA	24299761	24290635	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24290996_24291138_24291626_24292183_24292785_24296508_24296589_24296737_24296882_24298956_24299131_24299580
transcript_57276.known	chr14	+	331	2	FSM	ENSG00000288044.2	ENST00000669726.2	355	2	12	12	12	-12	multi-exon	FALSE	canonical	3	87	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTTGAGTAGTATTATA	24270494	True	NA	79	True	AATAAA	-9	NA	24271212	24298846	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24271311_24298613
transcript_57280.known	chr14	+	6045	10	FSM	ENSG00000196943.14	ENST00000267425.8	6045	10	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	9.06492357972051	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCTGCCAGTCTTTTGTC	24296949	True	NA	4	True	AATAAA	-15	NA	24299849	24309124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24300202_24300407_24300858_24301611_24301723_24301964_24302107_24302231_24302425_24303073_24303215_24303731_24303858_24304040_24304278_24304492_24304599_24304937
transcript_57284.nnic	chr14	-	2482	8	NNC	ENSG00000136305.12	novel	2409	8	NA	NA	-5	0	intron_retention	FALSE	canonical	1	1	junction_7	15.160367234796	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTCTGACTCCAATTTAA	-24311123	True	NA	-1	True	AATAAA	-23	NA	24311435	24305186	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_-_24305766_24305946_24306138_24306373_24306524_24307370_24307516_24307817_24307954_24308478_24308831_24310406_24310549_24310648
transcript_57286.known	chr14	-	2294	7	FSM	ENSG00000136305.12	ENST00000258807.5	2294	7	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_6	4.14996653266291	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTCTGACTCCAATTTAA	-24311110	True	NA	-1	True	AATAAA	-23	NA	24311422	24305186	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24305766_24305946_24306138_24306373_24306524_24307370_24307516_24307817_24307921_24308478_24308831_24310648
transcript_57287.nnic	chr14	-	2412	7	NNC	ENSG00000136305.12	novel	2294	7	NA	NA	-77	0	intron_retention	FALSE	canonical	2	8	junction_5	9.74679434480896	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTCTGACTCCAATTTAA	NA	False	NA	-1	True	AATAAA	-23	NA	24311507	24305186	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_-_24305766_24305946_24306138_24306373_24306524_24307370_24307516_24307817_24307954_24308478_24308831_24310648
transcript_57290.known	chr14	+	2703	2	FSM	ENSG00000213903.9	ENST00000345363.8	2703	2	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTTCCGGTATTTTTGA	24311463	True	NA	12	True	AATAAA	-23	NA	24311501	24318036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24311805_24315636
transcript_57291.known	chr14	+	4110	2	FSM	ENSG00000213903.9	ENST00000396789.4	4110	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTTCCGGTATTTTTGA	24313272	False	NA	12	True	AATAAA	-23	NA	24313310	24318036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24315021_24315636
transcript_5731.known	chr1	+	619	3	FSM	ENSG00000060656.20	ENST00000527027.1	619	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	58	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTTGTCCTCACTAACC	29259431	True	NA	NA	False	NA	NA	NA	29260180	29275685	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_29260268_29260609_29260904_29275447
transcript_57311.known	chr14	+	3057	10	FSM	ENSG00000100968.14	ENST00000554050.5	3057	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	29.7860684975915	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGGCTCCAGAGCTCTT	24368006	False	NA	28	True	AATAAA	-18	NA	24368019	24378056	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24368441_24369498_24370595_24372440_24372604_24373170_24373371_24373694_24373868_24374325_24374467_24375659_24375716_24375974_24376102_24376293_24376555_24377637
transcript_57313.known	chr14	+	4762	10	FSM	ENSG00000100968.14	ENST00000250373.9	4762	10	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_9	13.2748718344933	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTCAAACTCAATATTTT	24367311	True	NA	3	True	AATAAA	-19	NA	24368183	24379601	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24368441_24369498_24370595_24372440_24372604_24373170_24373371_24373694_24373868_24374325_24374467_24375659_24375716_24375974_24376102_24376293_24376879_24377637
transcript_5732.known	chr1	-	5246	5	FSM	ENSG00000162512.16	ENST00000339394.7	5246	5	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_4	37.645550865939	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCGTGTCCAGAGTATG	-30906989	True	NA	-1	True	AATAAA	-16	NA	30908758	30869465	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_30873378_30874296_30874589_30876551_30877166_30878622_30878741_30908448
transcript_57320.known	chr14	+	5367	9	FSM	ENSG00000100968.14	ENST00000553708.5	5367	9	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_5	11.8367806011601	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAACTCAATATTTTTTG	24368327	False	NA	6	True	AATAAA	-22	NA	24368340	24379604	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24368441_24369498_24370595_24372440_24372604_24373170_24373371_24373694_24373868_24374325_24374467_24375659_24375716_24375974_24376102_24376293
transcript_57328.nic	chr14	+	4584	8	NIC	ENSG00000100968.14	novel	5367	9	NA	NA	12	-1	intron_retention	FALSE	canonical	3	81	junction_2	10.6598617749586	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCAGGCTCCAGAGCTC	24368018	False	NA	26	True	AATAAA	-16	NA	24368031	24378054	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_24368441_24369498_24370595_24372440_24372604_24373170_24373371_24373694_24374467_24375659_24375716_24375974_24376102_24376293
transcript_57331.known	chr14	+	7635	9	FSM	ENSG00000205978.6	ENST00000382554.4	7635	9	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	10.5170991723003	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATGTCCAGTTCTTTGT	24397734	True	NA	6	True	AATAAA	-15	NA	24399002	24419283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24399087_24399229_24399445_24407868_24408528_24408651_24410209_24411075_24411207_24411353_24411451_24412996_24413099_24413315_24413418_24414595
transcript_57333.known	chr14	+	6778	8	FSM	ENSG00000100441.10	ENST00000553935.6	6778	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	19.6811315420509	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATATCCCTCTCTCTGTCTT	24428168	True	NA	NA	False	AATAAA	-24	NA	24429953	24441843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24430120_24430713_24430932_24431462_24432611_24432721_24432853_24432935_24433033_24436071_24436180_24436387_24436490_24437035
transcript_57337.known	chr14	+	2443	8	FSM	ENSG00000100441.10	ENST00000556842.5	2443	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	29.5241167418732	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTGGGCAGGAAGTGACAG	24428149	True	NA	NA	False	NA	NA	NA	24429934	24437617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_24429992_24430713_24430932_24431462_24432611_24432721_24432853_24432935_24433033_24436071_24436180_24436387_24436490_24437035
transcript_57342.known	chr14	-	1206	6	FSM	ENSG00000100445.18	ENST00000399395.8	1206	6	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_5	104.542814195907	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCTCATCTCTTTGGC	-24436650	True	NA	-12	True	AATAAA	-19	NA	24442776	24439765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24440493_24440782_24440927_24441673_24441796_24442177_24442261_24442345_24442453_24442753
transcript_57343.nic	chr14	-	1268	6	NIC	ENSG00000100445.18	novel	1206	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_5	143.27791176591	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGGCTCATCTCTTTG	-24442867	False	NA	-14	True	AATAAA	-17	NA	24442904	24439767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_24440493_24440782_24440927_24441673_24441796_24442177_24442261_24442345_24442453_24442817
transcript_57345.nic	chr14	-	1316	5	NIC	ENSG00000100445.18	novel	1206	6	NA	NA	-27	0	intron_retention	FALSE	canonical	3	142	junction_4	116.043903329731	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGGCTCATCTCTTTG	-24436677	True	NA	-14	True	AATAAA	-17	NA	24442803	24439767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_24440493_24440782_24440927_24441673_24441796_24442177_24442453_24442753
transcript_57347.known	chr14	-	976	5	FSM	ENSG00000100445.18	ENST00000555365.5	976	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	176.143939719764	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTAATCTTTTCAACTC	-24436639	True	NA	NA	False	NA	NA	NA	24442765	24439901	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24440493_24440782_24440927_24441673_24441796_24442345_24442453_24442753
transcript_57353.known	chr14	-	2476	3	FSM	ENSG00000139899.11	ENST00000267406.11	2476	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACATTTTAAAAGTTGAAT	-24429628	False	NA	NA	False	AATAAA	-21	NA	24429668	24426544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24427987_24428285_24428406_24428754
transcript_57354.nic	chr14	-	1008	3	ISM	ENSG00000100445.18	ENST00000538105.6	1041	4	132	-14	-35	0	3prime_fragment	FALSE	canonical	3	79	junction_2	184	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGGCTCATCTCTTTG	-24442279	False	107	-14	True	AATAAA	-17	NA	24442316	24439767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_24440493_24440782_24440927_24442177
transcript_57355.known	chr14	-	556	3	FSM	ENSG00000100445.18	ENST00000556249.1	556	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	200	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCAGAAGGTGATCCCAC	-24442404	False	NA	NA	False	NA	NA	NA	24442441	24440176	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24440493_24440782_24440927_24442345
transcript_57359.known	chr14	-	1041	4	FSM	ENSG00000100445.18	ENST00000538105.6	1041	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	155.857484759493	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGTCTCACTAACCTT	-24442411	False	107	-28	True	AATAAA	-3	NA	24442448	24439781	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24440493_24440782_24440927_24442177_24442261_24442345
transcript_57360.known	chr14	-	1960	3	FSM	ENSG00000100445.18	ENST00000556262.5	1960	3	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_2	26.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTCTCACTAACCTTGG	-24436650	True	NA	-26	True	AATAAA	-5	NA	24442776	24439779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24440493_24440782_24440927_24441673
transcript_57361.known	chr14	-	1970	6	FSM	ENSG00000168952.16	ENST00000419632.6	1970	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	23.7873916182502	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAATCGCAGATAGAAAT	-25049327	False	NA	NA	False	NA	NA	NA	25049889	24812086	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24812733_24819036_24819195_24855935_24856102_24857026_24857158_24974664_24974851_25049206
transcript_57362.known	chr14	-	4132	6	FSM	ENSG00000168952.16	ENST00000323944.10	4190	6	-150	208	-150	-6	multi-exon	FALSE	canonical	3	34	junction_5	10.8185026690388	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGAAATTTGTTTCTTGC	NA	False	NA	-8	True	ATTAAA	-14	NA	25050297	24809661	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_24812733_24819036_24819195_24855935_24856102_24857026_24857158_24974664_24974851_25049877
transcript_57366.known	chr14	-	896	5	FSM	ENSG00000139910.20	ENST00000344429.9	896	5	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_1	11.2333209693305	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAAGAGTAAGTTTGATC	-26597430	False	93	-12	True	AATAAA	-16	NA	26597440	26470117	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_26470491_26472319_26472392_26479976_26480144_26595409_26595554_26597300
transcript_57370.known	chr14	+	508	3	FSM	ENSG00000257869.1	ENST00000548280.1	508	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGGCCAACCATGGGCCC	28317897	True	NA	NA	False	NA	NA	NA	28318140	28418612	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_28318533_28405425_28405473_28418543
transcript_57372.known	chr14	-	3189	19	FSM	ENSG00000184304.17	ENST00000415220.6	3189	19	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_16	7.09372875533883	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTTTTCTTACTGGAGC	-29927630	False	NA	NA	False	ATTAAA	-28	NA	29927642	29576941	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_29577457_29578274_29578361_29597490_29597759_29599026_29599126_29599655_29599818_29624151_29624259_29626483_29626557_29629040_29629094_29630741_29631022_29632868_29632947_29634417_29634542_29636289_29636495_29638488_29638567_29638693_29638905_29656475_29656500_29663698_29663860_29666076_29666209_29725535_29725675_29927248
transcript_57375.known	chr14	-	3833	18	FSM	ENSG00000184304.17	ENST00000331968.11	3833	18	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_14	8.07962108125183	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCCACCTCATTGAA	-29927351	True	NA	0	True	AATAAA	-18	NA	29927847	29576478	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_29577457_29578274_29578361_29597490_29597759_29599026_29599126_29599655_29599818_29624151_29624259_29626483_29626557_29629040_29629094_29630741_29631022_29632868_29632947_29634417_29634542_29636289_29636495_29638488_29638567_29638693_29638905_29663698_29663860_29666076_29666209_29725535_29725675_29927248
transcript_57384.known	chr14	+	5770	15	FSM	ENSG00000092140.16	ENST00000206595.11	5770	15	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_7	41.3792810227435	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGGACTCAGATAAATGGC	30550113	True	NA	-94	True	AATAAA	-17	NA	30559157	30620064	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_30559273_30581075_30581117_30586717_30586816_30589382_30589485_30592322_30592448_30593473_30593640_30597419_30597527_30598482_30598600_30601769_30601895_30601998_30602132_30605504_30605813_30607887_30608070_30612206_30612380_30615348_30615540_30616277
transcript_57395.known	chr14	+	2334	14	FSM	ENSG00000092140.16	ENST00000438909.6	2334	14	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	104.708781838406	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAATATTATAGCCACT	30550113	True	NA	7	True	AATAAA	-18	NA	30559157	30616669	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_30559273_30586717_30586816_30589382_30589485_30592322_30592448_30593473_30593640_30597419_30597527_30598482_30598600_30601769_30601895_30601998_30602132_30605504_30605813_30607887_30608070_30612206_30612380_30615348_30615540_30616277
transcript_57408.nic	chr14	+	1206	11	ISM	ENSG00000092140.16	ENST00000206595.11	5770	15	-16	14499	-16	0	5prime_fragment	FALSE	canonical	3	318	junction_7	43.42303536143	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACTAAAAGATT	30550097	True	NA	NA	False	AATAGA	-17	NA	30559141	30605565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_30559273_30581075_30581117_30586717_30586816_30589382_30589485_30592322_30592448_30593473_30593640_30597419_30597527_30598482_30598600_30601769_30601895_30601998_30602132_30605504
transcript_57411.nic	chr14	+	1180	10	ISM	ENSG00000092140.16	ENST00000438909.6	2334	14	-31	11104	-31	0	5prime_fragment	TRUE	canonical	3	70	junction_1	120.570966756891	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACTAAAAGATT	30550082	True	NA	NA	False	AATAGA	-17	NA	30559126	30605565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_30559273_30586717_30586816_30589382_30589485_30592322_30592448_30593473_30593640_30597419_30597527_30598482_30598600_30601769_30601895_30601998_30602132_30605504
transcript_57413.nic	chr14	+	1035	10	ISM	ENSG00000092140.16	ENST00000648008.1	4126	16	-80	16204	-16	-3544	5prime_fragment	FALSE	canonical	3	318	junction_7	45.7699561818546	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTATTACCCAATTCTAA	30550097	True	NA	NA	False	AAAAAG	-9	NA	30559141	30602021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_30559273_30581075_30581117_30586717_30586816_30589382_30589485_30592322_30592448_30593473_30593640_30597419_30597527_30598482_30598600_30601769_30601895_30601998
transcript_57421.known	chr14	+	2062	25	FSM	ENSG00000092108.22	ENST00000678399.1	2062	25	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_19	149.528053852409	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCCTTCTCTGTAACAG	30612508	True	NA	74	True	GATAAA	-32	NA	30622303	30735685	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707816_30707915_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_57422.known	chr14	+	2190	25	FSM	ENSG00000092108.22	ENST00000458591.7	2190	25	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_1	56.2723875201881	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATAGGTTATGATTGAAG	30612523	True	NA	NA	False	GATAAA	-23	NA	30622318	30735850	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_57425.known	chr14	+	2171	25	FSM	ENSG00000092108.22	ENST00000677340.1	2171	25	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_15	147.39513692415	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGAAACATTTCAGAAA	30612526	True	NA	NA	False	NA	NA	NA	30622321	30735774	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_30622463_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700190_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_57429.known	chr14	+	1943	24	FSM	ENSG00000092108.22	ENST00000463622.6	1943	24	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	116.915396034345	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTGTAACAGTGTCCTA	30612523	True	NA	81	True	GATAAA	-39	NA	30622318	30735692	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_30622400_30628208_30628280_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_57430.known	chr14	+	2058	24	FSM	ENSG00000092108.22	ENST00000544052.6	2058	24	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	101.629093225277	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAATAAAATTTCAACATT	30612523	True	NA	NA	False	ATTAAA	-12	NA	30622318	30735789	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_30622400_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_57434.known	chr14	+	1995	24	FSM	ENSG00000092108.22	ENST00000676658.1	1995	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	115.503385820961	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCCTAACAGTGAAAATCAG	30612508	True	NA	95	True	AAAAAG	-44	NA	30622303	30735706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30734789_30734859_30735585
transcript_57435.nnic	chr14	+	1788	22	NNC	ENSG00000092108.22	novel	1995	24	NA	NA	0	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	117.560656414074	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGTGGTGAAATGATTT	30612515	True	NA	NA	False	AATATA	-40	NA	30622310	30722854	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30722830
transcript_57440.known	chr14	+	2372	15	FSM	ENSG00000092108.22	ENST00000678006.1	2372	15	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_1	38.4014774375642	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCTCAAAAACAAACAAACAA	30612508	True	NA	NA	False	NA	NA	NA	30622303	30695867	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772
transcript_57441.nic	chr14	+	1217	14	ISM	ENSG00000092108.22	ENST00000678006.1	2372	15	7	20855	0	1018	5prime_fragment	FALSE	canonical	3	389	junction_1	39.6591990716645	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTATTGATCTCCATACA	30612515	True	NA	NA	False	NA	NA	NA	30622310	30675012	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983
transcript_57447.known	chr14	+	4736	11	FSM	ENSG00000092108.22	ENST00000469043.2	4736	11	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_10	122.388112167808	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTATTCCTGTCTTAGAA	30612519	True	NA	NA	False	NA	NA	NA	30622314	30661939	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30658082
transcript_57454.known	chr14	-	4195	18	FSM	ENSG00000196792.12	ENST00000357479.10	4195	18	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_10	24.7207238334805	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTTAGTGAGTCCTTC	-31023099	True	NA	-39	True	AATAAA	-41	NA	31026379	30893803	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_30895581_30895661_30895749_30902535_30902644_30905417_30905559_30906876_30907045_30911040_30911163_30911776_30911825_30912006_30912183_30913523_30913658_30918965_30919107_30929200_30929312_30935162_30935305_30936494_30936625_30947089_30947264_30950862_30950945_30955619_30955694_30956138_30956243_31025903
transcript_57460.known	chr14	-	3970	16	FSM	ENSG00000196792.12	ENST00000355683.9	3970	16	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_9	13.4930434751476	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTGAGTCCTTCATTTT	-31023121	True	NA	-34	True	ATTAAA	-18	NA	31026401	30893798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_30895581_30895661_30895749_30902535_30902644_30905417_30905559_30906876_30907045_30911040_30911163_30911776_30911825_30912006_30912183_30913523_30913658_30935162_30935305_30936494_30936625_30947089_30947264_30950862_30950945_30955619_30955694_30956138_30956243_31025903
transcript_57466.nic	chr14	-	915	5	ISM	ENSG00000196792.12	ENST00000555358.5	2208	15	-87	51767	-5	0	5prime_fragment	FALSE	canonical	3	67	junction_4	9.70502447189084	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGGGACAAGAAATAAAA	-31023126	True	NA	0	True	NA	NA	NA	31026406	30947111	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_30947264_30950862_30950945_30955619_30955694_30956138_30956243_31025903
transcript_57469.nic	chr14	-	730	2	ISM	ENSG00000196792.12	ENST00000555358.5	2208	15	-211	60795	-129	-9028	5prime_fragment	FALSE	canonical	3	67	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTATGTGTGCCTCATTTTG	-31026520	False	44	48	True	AATAAA	-30	NA	31026530	30956139	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_30956243_31025903
transcript_57470.nic	chr14	-	537	2	ISM	ENSG00000196792.12	ENST00000555358.5	2208	15	-88	60865	-6	-9098	5prime_fragment	FALSE	canonical	3	67	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTCAAGAGAACCTGAAGAA	-31023127	True	NA	-22	True	AAGAAA	-2	NA	31026407	30956209	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_30956243_31025903
transcript_57475.known	chr14	+	2536	12	FSM	ENSG00000100473.18	ENST00000396618.9	2536	12	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	19.197968212055	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCTTACTTTTATTACT	30873522	True	NA	4	True	AATAAA	-22	NA	30874558	30890618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_30874592_30874915_30874973_30875055_30875104_30877571_30877729_30878810_30878945_30879422_30879486_30880451_30880497_30880586_30880735_30884552_30884657_30885393_30885621_30885795_30886313_30889615
transcript_57479.known	chr14	+	2860	11	FSM	ENSG00000100473.18	ENST00000644874.2	2860	11	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_7	14.624978632463	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCTTACTTTTATTACT	30873522	True	NA	4	True	AATAAA	-22	NA	30874558	30890618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_30874973_30875055_30875104_30877571_30877729_30878810_30878945_30879422_30879486_30880451_30880497_30880586_30880735_30884552_30884657_30885393_30885621_30885795_30886313_30889615
transcript_57485.known	chr14	+	4060	6	FSM	ENSG00000100478.16	ENST00000542754.7	4060	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	7.38647412504775	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCATTCTGAGTAGTGTGA	31025335	True	NA	9	True	AATAAA	-24	NA	31025648	31096450	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_31025788_31066125_31066335_31069842_31069930_31072904_31072974_31080572_31080585_31092906
transcript_57499.nic	chr14	-	2786	12	ISM	ENSG00000092148.14	ENST00000399332.6	9445	43	-55	56723	-44	12316	5prime_fragment	FALSE	canonical	3	37	junction_11	22.0716339402725	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGGTCTTAATTATAG	-31207838	False	NA	5	True	AATGAA	-22	NA	31207848	31156839	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_31157011_31157164_31157304_31168297_31168473_31169353_31169469_31171860_31171960_31172045_31172123_31173155_31173427_31173524_31173807_31174910_31175139_31178019_31178255_31205796_31205958_31207015
transcript_57500.nic	chr14	-	2347	12	ISM	ENSG00000092148.14	ENST00000687002.1	5207	25	-66	28468	9	12316	5prime_fragment	FALSE	canonical	3	65	junction_11	15.9487816576576	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGGTCTTAATTATAG	-31203552	True	NA	5	True	AATGAA	-22	NA	31207784	31156839	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_31157011_31157164_31157304_31168297_31168473_31169353_31169469_31171860_31171960_31172045_31172123_31173155_31173427_31173524_31173807_31174910_31175139_31178019_31178255_31205796_31205958_31207390
transcript_57505.nic	chr14	-	2678	10	ISM	ENSG00000092148.14	ENST00000399332.6	9445	43	-385	68309	-374	730	5prime_fragment	FALSE	canonical	3	37	junction_9	21.653842358549	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATACAAACAAAGATGAAGA	-31208007	True	NA	NA	False	AATAAA	-22	NA	31208178	31168425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_31168473_31169353_31169469_31171860_31171960_31172045_31172123_31173155_31173427_31173524_31173807_31174910_31175139_31178019_31178255_31205796_31205958_31207015
transcript_57506.nic	chr14	-	2305	10	ISM	ENSG00000092148.14	ENST00000687002.1	5207	25	-462	40054	-376	730	5prime_fragment	FALSE	canonical	3	65	junction_9	14.0668597494209	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATACAAACAAAGATGAAGA	-31208170	False	NA	NA	False	AATAAA	-22	NA	31208180	31168425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_31168473_31169353_31169469_31171860_31171960_31172045_31172123_31173155_31173427_31173524_31173807_31174910_31175139_31178019_31178255_31205796_31205958_31207390
transcript_57514.known	chr14	-	7811	36	FSM	ENSG00000129493.15	ENST00000543095.7	7811	36	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_35	17.9036879110514	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGTATTTTTAAATTAT	-31419272	True	NA	-2	True	AATAAA	-18	NA	31420550	31291787	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_31293613_31293890_31294105_31295908_31296064_31302294_31302520_31304904_31305178_31306731_31306880_31307892_31308021_31308933_31309183_31312967_31313191_31315769_31315950_31318223_31318293_31321498_31321681_31323564_31323805_31326162_31326343_31337475_31337615_31343895_31344066_31345086_31345277_31347747_31347908_31349788_31349980_31350611_31350718_31358636_31358813_31358893_31359058_31364188_31364299_31371809_31371910_31374815_31374969_31380466_31380579_31383520_31383772_31386419_31386576_31387119_31387376_31388844_31389006_31394051_31394227_31395198_31395349_31398672_31398782_31400300_31400513_31402849_31403050_31420471
transcript_57520.known	chr14	-	507	3	FSM	ENSG00000129493.15	ENST00000382464.6	507	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	64.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTTCCTGTTGTATTT	-31419253	True	NA	NA	False	ATTAAA	-19	NA	31420531	31400265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_31400513_31402849_31403050_31420471
transcript_57523.known	chr14	-	749	4	FSM	ENSG00000203546.7	ENST00000547760.1	749	4	0	0	0	0	multi-exon	FALSE	non_canonical	1	4	junction_1	19.6129209111409	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTATGAATCTTATTACA	-31455153	True	NA	-37	True	NA	NA	NA	31457376	31427506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_31427793_31428143_31428189_31453274_31453345_31457028
transcript_57526.known	chr14	-	1400	5	FSM	ENSG00000129480.13	ENST00000356180.4	1400	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	27.9419040152957	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTCTATTTTTCAGTTT	-31455202	True	NA	NA	False	ATTAAA	-20	NA	31457425	31446991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_31447249_31447389_31447570_31447704_31448455_31453274_31453345_31457282
transcript_57534.known	chr14	-	823	3	FSM	ENSG00000129480.13	ENST00000549850.1	823	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	6	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGGACCATTCACACACTT	-31455265	True	NA	NA	False	NA	NA	NA	31457488	31448161	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_31448455_31453274_31453345_31457028
transcript_57535.known	chr14	-	2713	3	FSM	ENSG00000129480.13	ENST00000310850.9	2713	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	7	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGTTGTCTCAAAGTTT	-31455283	True	NA	-5	True	AATAAA	-20	NA	31457506	31446035	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_31448455_31453274_31453345_31457282
transcript_57539.known	chr14	+	3040	11	FSM	ENSG00000151413.17	ENST00000281081.12	3040	11	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_4	10.6249705881946	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCTATATCTGAACTGAAA	31560454	True	NA	22	True	AATAAA	-24	NA	31561403	31861224	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_31561548_31562067_31562216_31565013_31565049_31599288_31599380_31673354_31673395_31673483_31673575_31787779_31787874_31826628_31826715_31846470_31846592_31850118_31850202_31859117
transcript_57542.known	chr14	+	4824	7	FSM	ENSG00000100852.14	ENST00000556611.5	4824	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	47.5815090134813	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTTCAGTAGTATACTTCA	32074456	True	NA	NA	False	AAAAAG	-24	NA	32076966	32155011	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_32077054_32090501_32094387_32117142_32117288_32146262_32146341_32149901_32150034_32152422_32152529_32154620
transcript_57550.nic	chr14	+	4083	2	ISM	ENSG00000100852.14	ENST00000556611.5	4824	7	-112	60626	-112	3296	5prime_fragment	FALSE	canonical	3	49	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAGGTTAACTTAAGGTC	32076839	False	NA	33	True	GATAAA	-3	NA	32076854	32094385	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_32077054_32090501
transcript_57554.known	chr14	-	2706	5	FSM	ENSG00000129521.15	ENST00000250457.9	2706	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	5.76085931090146	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCATTCTAATGGTTTGA	-33948377	True	NA	-9	True	AATAAA	-15	NA	33951074	33924226	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_33925923_33926959_33927034_33929075_33929213_33931095_33931216_33950395
transcript_57555.known	chr14	-	1004	5	FSM	ENSG00000129521.15	ENST00000553215.5	1004	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	30.7774267930248	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTGGAGAATTATCACAA	-33948129	False	NA	NA	False	NA	NA	NA	33950826	33925398	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_33925923_33926959_33927034_33929075_33929213_33931095_33931216_33950677
transcript_57561.known	chr14	-	2849	1	FSM	ENSG00000129521.15	ENST00000547327.2	2849	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCCATTTCTACATGATT	-33948384	True	NA	NA	False	ATTAAA	-16	NA	33951081	33948232	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_33948200_33951100
transcript_57562.known	chr14	-	2662	2	FSM	ENSG00000165389.7	ENST00000298130.5	2662	2	0	0	0	0	multi-exon	FALSE	canonical	3	674	junction_1	0	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAATGATTATTTGAGCCT	-34448437	True	NA	NA	False	ATTAAA	-23	NA	34462240	34432787	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_34435305_34462095
transcript_57565.known	chr14	-	1303	6	FSM	ENSG00000129518.10	ENST00000250454.8	1303	6	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_2	33.9682204420544	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTGTATTGTTTTTGCT	-34535175	True	NA	-8	True	ATTAAA	-20	NA	34539701	34515937	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_34516587_34524696_34524808_34529357_34529476_34533443_34533540_34536093_34536276_34539554
transcript_57566.nic	chr14	-	1567	6	NIC	ENSG00000129518.10	novel	1303	6	NA	NA	-34	-72	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	151.390092146085	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTTTCTGAGTGTTAT	-34535212	True	NA	-16	True	ATTAAA	-38	NA	34539738	34516009	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_34516587_34524696_34524808_34529357_34529476_34533443_34533540_34536093_34536276_34539255
transcript_57570.nnic	chr14	-	1163	5	NIC	ENSG00000129518.10	novel	1303	6	NA	NA	-47	-72	combination_of_known_splicesites	FALSE	canonical	3	19	junction_2	156.436089186607	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTTTCTGAGTGTTAT	-34535225	True	NA	-16	True	ATTAAA	-38	NA	34539751	34516009	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_34516587_34524696_34524808_34533443_34533540_34536093_34536276_34539554
transcript_57571.nic	chr14	-	504	4	ISM	ENSG00000129518.10	ENST00000250454.8	1303	6	-50	13509	-47	-91	5prime_fragment	FALSE	canonical	3	351	junction_2	33.5360502544153	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACACAAGATTCCAACAAA	-34535225	True	NA	NA	False	AAAAAG	-7	NA	34539751	34529446	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_34529476_34533443_34533540_34536093_34536276_34539554
transcript_57573.nic	chr14	-	475	3	ISM	ENSG00000129518.10	ENST00000250454.8	1303	6	-50	17506	-47	2420	5prime_fragment	FALSE	canonical	3	351	junction_1	32.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAACCTATTTACCAG	-34535225	True	NA	NA	False	NA	NA	NA	34539751	34533443	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_34533540_34536093_34536276_34539554
transcript_57574.known	chr14	-	562	2	FSM	ENSG00000129518.10	ENST00000555683.1	562	2	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCAGTGGCATGATCATAG	-34535178	True	NA	NA	False	NA	NA	NA	34539704	34535863	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_34536276_34539554
transcript_57578.known	chr14	-	2975	14	FSM	ENSG00000129515.20	ENST00000652385.1	2975	14	0	0	0	0	multi-exon	FALSE	canonical	3	536	junction_13	99.8392198611608	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTGAAAATGCTGTGTA	-34623223	True	NA	NA	False	AATAAA	-20	NA	34630160	34561411	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_34563176_34567685_34567772_34567853_34568014_34575755_34575843_34581560_34581601_34586229_34586306_34593044_34593151_34597549_34597646_34603347_34603472_34605595_34605718_34608029_34608141_34609637_34609743_34629906_34629955_34630110
transcript_57586.nic	chr14	-	1075	12	ISM	ENSG00000129515.20	ENST00000652385.1	2975	14	12	6480	0	0	5prime_fragment	FALSE	canonical	3	536	junction_11	99.2336753025382	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAGAAATTTGAAAAAATAT	-34623211	True	NA	NA	False	AATAAA	-39	NA	34630148	34567891	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_34568014_34575755_34575843_34581560_34581601_34586229_34586306_34593044_34593151_34597549_34597646_34603347_34603472_34605595_34605718_34608029_34608141_34609637_34609743_34629906_34629955_34630110
transcript_57588.nic	chr14	-	917	10	ISM	ENSG00000129515.20	ENST00000652385.1	2975	14	-44	20154	-44	4664	5prime_fragment	FALSE	canonical	3	536	junction_9	107.076757976535	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGAGTAAGTACTAAATTA	-34623267	False	NA	NA	False	GATAAA	-2	NA	34630204	34581565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_34581601_34586229_34586306_34593044_34593151_34597549_34597646_34603347_34603472_34605595_34605718_34608029_34608141_34609637_34609743_34629906_34629955_34630110
transcript_57589.nic	chr14	-	631	7	ISM	ENSG00000129515.20	ENST00000652385.1	2975	14	-44	36207	-44	5746	5prime_fragment	FALSE	canonical	3	536	junction_6	124.552086382454	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAACTTGAAGACTTCTT	-34623267	False	NA	NA	False	AATAAA	-4	NA	34630204	34597618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_34597646_34603347_34603472_34605595_34605718_34608029_34608141_34609637_34609743_34629906_34629955_34630110
transcript_57590.nic	chr14	-	554	6	ISM	ENSG00000129515.20	ENST00000652385.1	2975	14	12	41930	0	23	5prime_fragment	FALSE	canonical	3	536	junction_5	123.740696619988	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACATTGATTGGTGGTCA	-34623211	True	NA	NA	False	AATATA	-15	NA	34630148	34603341	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_34603472_34605595_34605718_34608029_34608141_34609637_34609743_34629906_34629955_34630110
transcript_57592.known	chr14	-	441	1	FSM	ENSG00000240463.1	ENST00000480487.1	441	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAACCATGCTGGGTTAA	NA	False	NA	-54	True	NA	NA	NA	34569129	34568688	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_34568700_34569100
transcript_57593.known	chr14	-	4306	4	FSM	ENSG00000165410.15	ENST00000298159.11	4306	4	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_2	21.6999743983464	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGATCATTGAACCTCT	-34713052	True	NA	NA	False	ATTAAA	-21	NA	34714593	34709112	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_34712978_34713059_34713137_34713253_34713562_34714537
transcript_57595.known	chr14	-	1223	4	FSM	ENSG00000165410.15	ENST00000422678.2	1223	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	54.3220847251731	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAATAAAAATTGTGGCAT	-34713036	True	NA	NA	False	NA	NA	NA	34714577	34712036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_34712978_34713059_34713137_34713396_34713562_34714537
transcript_57596.known	chr14	-	1387	4	FSM	ENSG00000165410.15	ENST00000554470.5	1387	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	55.7155474012615	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGCCTTGTTTTCCTTGG	-34714795	False	NA	NA	False	AATAAA	-21	NA	34714823	34712007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_34712978_34713059_34713137_34713507_34713562_34714537
transcript_57601.known	chr14	-	5920	26	FSM	ENSG00000198604.11	ENST00000358716.8	5920	26	0	0	0	0	multi-exon	TRUE	canonical	1	24	junction_15	22.784205055257	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGAATTCTCTAATTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	34875647	34752730	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_34753705_34754826_34754915_34758703_34758847_34761756_34762224_34764706_34764934_34765020_34765269_34771510_34771660_34773571_34773727_34774326_34774491_34775918_34776516_34780185_34780311_34783118_34783233_34783761_34783928_34785776_34786002_34792774_34792922_34794748_34794888_34795669_34795766_34800223_34800391_34801093_34801194_34802853_34802989_34807450_34807539_34810934_34811037_34826012_34826157_34862043_34862323_34874491_34874663_34875137
transcript_57609.nnic	chr14	-	1348	9	ISM	ENSG00000198604.11	ENST00000360310.6	5729	27	-41	47595	-41	10616	5prime_fragment	FALSE	canonical	3	63	junction_8	12.6682427747498	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGATAAAGAGAAAAAGAG	NA	False	NA	-22	True	ATTAAA	-44	NA	34875401	34800325	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_34800391_34801093_34801194_34802853_34802989_34807450_34807539_34810934_34811037_34826012_34826157_34862043_34862323_34874491_34874663_34875137
transcript_57611.nnic	chr14	-	1271	8	ISM	ENSG00000198604.11	ENST00000360310.6	5729	27	-41	48375	-41	9836	5prime_fragment	FALSE	canonical	3	63	junction_7	13.3676429317595	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTCACTGGGTGAGTTT	NA	False	NA	NA	False	GATAAA	-20	NA	34875401	34801105	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_34801194_34802853_34802989_34807450_34807539_34810934_34811037_34826012_34826157_34862043_34862323_34874491_34874663_34875137
transcript_57616.known	chr14	+	2187	16	FSM	ENSG00000100883.13	ENST00000216774.11	2187	16	0	0	0	0	multi-exon	FALSE	canonical	3	607	junction_11	48.5708646092376	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTTGTTAACTTTCTTTA	34973689	True	NA	38	True	AATAAA	-23	NA	34982991	35029567	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_34983216_34996676_34996788_34999557_34999650_35000935_35001021_35007282_35007388_35008626_35008694_35008773_35008832_35011508_35011660_35013345_35013495_35013801_35013903_35014743_35014831_35018691_35018766_35018965_35019075_35022909_35023081_35028087_35028184_35029060
transcript_57619.known	chr14	+	2253	16	FSM	ENSG00000100883.13	ENST00000678963.1	2253	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	179.561861825451	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTATAAGTTAAGGGGTTG	34982328	True	NA	25	True	AATAAA	-10	NA	34982700	35029554	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_34983004_34996676_34996788_34999557_34999650_35000935_35001021_35007282_35007388_35008626_35008694_35008773_35008832_35011508_35011660_35013345_35013495_35013801_35013903_35014743_35014831_35018691_35018766_35018965_35019075_35022909_35023081_35028087_35028184_35029060
transcript_5762.known	chr1	-	3936	22	FSM	ENSG00000134644.16	ENST00000440538.6	3936	22	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_10	99.348581215683	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAAAAAGG	-31052322	True	NA	5	True	AAAAAG	-5	NA	31065684	30932843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_30933343_30936642_30936836_30941150_30941273_30941997_30942124_30945345_30945484_30950126_30950262_30952233_30952364_30953713_30953982_30964673_30964911_30965981_30966198_30967166_30967311_30968353_30968493_30974650_30974803_30980061_30980167_30981311_30981406_30992389_30992661_30995053_30995221_31005852_31006032_31006993_31007103_31028795_31028865_31059203_31059578_31065615
transcript_57621.known	chr14	+	2304	15	FSM	ENSG00000100883.13	ENST00000555746.6	2304	15	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_13	177.02962971186	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTATAAGTTAAGGGGTTG	34982318	True	NA	25	True	AATAAA	-10	NA	34982690	35029554	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_34983216_34996676_34996788_34999557_34999650_35000935_35001021_35007282_35007388_35008626_35008694_35008773_35008832_35011508_35011660_35013345_35013495_35013801_35013903_35014743_35014831_35018691_35018766_35018965_35019075_35028087_35028184_35029060
transcript_57623.known	chr14	+	2045	15	FSM	ENSG00000100883.13	ENST00000678477.1	2045	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	183.631396541872	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTATAAGTTAAGGGGTT	34973668	True	NA	24	True	AATAAA	-9	NA	34982970	35029553	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_34983216_34996676_34996788_34999557_34999650_35000935_35001021_35007282_35007388_35008626_35008694_35008773_35008832_35011508_35011660_35013801_35013903_35014743_35014831_35018691_35018766_35018965_35019075_35022909_35023081_35028087_35028184_35029060
transcript_57624.known	chr14	+	2107	15	FSM	ENSG00000100883.13	ENST00000678519.1	2107	15	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	185.069553940994	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTATAAGTTAAGGGGTT	34973670	True	NA	24	True	AATAAA	-9	NA	34982972	35029553	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_34983216_34996676_34996788_34999557_34999650_35007282_35007388_35008626_35008694_35008773_35008832_35011508_35011660_35013345_35013495_35013801_35013903_35014743_35014831_35018691_35018766_35018965_35019075_35022909_35023081_35028087_35028184_35029060
transcript_57625.known	chr14	+	1949	15	FSM	ENSG00000100883.13	ENST00000555557.5	1949	15	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	182.828122697192	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAATTATCTCGAAGGC	34973722	True	NA	-75	True	NA	NA	NA	34983024	35029454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_34983216_34996676_34996788_35000935_35001021_35007282_35007388_35008626_35008694_35008773_35008832_35011508_35011660_35013345_35013495_35013801_35013903_35014743_35014831_35018691_35018766_35018965_35019075_35022909_35023081_35028087_35028184_35029060
transcript_57626.known	chr14	+	1751	13	FSM	ENSG00000100883.13	ENST00000553923.2	1751	13	0	0	0	0	multi-exon	FALSE	canonical	3	607	junction_11	48.5943383762164	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAATTTGGCTGGGTGAGG	34973668	True	NA	NA	False	TTTAAA	-4	NA	34982970	35019391	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_34983216_34996676_34996788_34999557_34999650_35000935_35001021_35007282_35007388_35008626_35008694_35008773_35008832_35011508_35011660_35013345_35013495_35013801_35013903_35014743_35014831_35018691_35018766_35018965
transcript_57629.known	chr14	+	1329	8	FSM	ENSG00000100883.13	ENST00000679045.1	1329	8	0	0	0	0	multi-exon	FALSE	canonical	3	631	junction_1	31.3342741210623	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCATGGTGGTGGGTGCCTG	34973668	True	NA	NA	False	AATACA	-12	NA	34982970	35012074	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_34983216_34996676_34996788_34999557_34999650_35000935_35001021_35007282_35007388_35008626_35008694_35008773_35008832_35011508
transcript_5763.known	chr1	-	5385	22	FSM	ENSG00000134644.16	ENST00000426105.7	5385	22	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_5	72.2747968416612	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGTGCTTTATTTTAAC	-31052355	True	NA	-2	True	AATACA	-16	NA	31065717	30931505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_30933343_30936642_30936836_30941150_30941273_30941997_30942124_30945345_30945484_30950126_30950262_30952233_30952364_30953713_30953982_30964673_30964911_30965981_30966279_30967166_30967311_30968353_30968493_30974650_30974803_30980061_30980164_30981311_30981406_30992389_30992661_30995053_30995221_31005852_31006032_31006993_31007103_31028795_31028865_31059203_31059578_31065615
transcript_57634.known	chr14	-	580	3	FSM	ENSG00000258704.7	ENST00000556705.6	614	3	34	0	0	0	multi-exon	TRUE	canonical	3	16	junction_2	5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGAATCTCTAGAGGTT	-34982209	True	NA	NA	False	NA	NA	NA	34982532	34963707	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_34964041_34969169_34969308_34982423
transcript_57636.known	chr14	-	600	4	FSM	ENSG00000258704.7	ENST00000554945.1	600	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	10.6562449087639	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAATCTCTTTTGCATTG	-34982169	True	NA	-3	True	AATAAA	-17	NA	34982492	34963913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_34964041_34969169_34969308_34971941_34972214_34982429
transcript_57638.known	chr14	+	6118	7	FSM	ENSG00000100890.16	ENST00000250377.11	6118	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	87.0314438707196	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTACTTTTATCATCT	35118495	True	NA	7	True	AATAAA	-21	NA	35122563	35277614	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_35122636_35122951_35124232_35127478_35127612_35180669_35180778_35266726_35266876_35270400_35270597_35273434
transcript_5764.known	chr1	-	5375	22	FSM	ENSG00000134644.16	ENST00000373747.7	5375	22	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_14	85.3946686456864	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGTGCTTTATTTTAAC	-31052342	True	NA	-2	True	AATACA	-16	NA	31065704	30931505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_30933343_30936642_30936836_30941150_30941273_30941997_30942124_30945345_30945484_30950126_30950262_30952233_30952364_30953713_30953982_30964673_30964911_30965981_30966279_30967166_30967311_30968353_30968493_30974650_30974803_30980061_30980167_30981311_30981406_30992389_30992661_30995053_30995221_31005852_31006032_31006993_31007103_31028795_31028865_31059203_31059578_31065615
transcript_57641.known	chr14	+	1406	7	FSM	ENSG00000100890.16	ENST00000605870.5	1406	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	103.215658803411	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGAATCATTTATCGTCC	35118653	False	NA	-36	True	NA	NA	NA	35122721	35274017	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_35122911_35126734_35126783_35127478_35127612_35180669_35180778_35266726_35266876_35270400_35270597_35273434
transcript_57642.known	chr14	+	789	6	FSM	ENSG00000100890.16	ENST00000557404.3	789	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	109.902502246309	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACCATATGATGAAGACTT	35122735	False	NA	NA	False	NA	NA	NA	35122758	35273485	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_35122911_35127478_35127612_35180669_35180778_35266726_35266876_35270400_35270597_35273434
transcript_57645.nic	chr14	-	1943	14	NIC	ENSG00000092020.11	novel	1511	13	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	127	junction_13	60.5876547270601	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATGTTTTGGTTACTGG	-35122520	False	NA	-2	True	AATAAA	-26	NA	35122542	35085471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_35085779_35087950_35088011_35091069_35091208_35095047_35095185_35096557_35096634_35096708_35096765_35099251_35099385_35107303_35107375_35108138_35108237_35109818_35109932_35110524_35110630_35116609_35116738_35121901_35122102_35122221
transcript_57652.known	chr14	+	858	6	FSM	ENSG00000151327.13	ENST00000382406.7	858	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	144.22205101856	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAAAAGCCAGATCTGAAA	35041806	True	NA	NA	False	NA	NA	NA	35046377	35081387	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_35046407_35046504_35046629_35053277_35053452_35077149_35077217_35078926_35079025_35081021
transcript_57656.nic	chr14	+	631	5	ISM	ENSG00000151327.13	ENST00000382406.7	858	6	-151	2375	-45	0	5prime_fragment	FALSE	canonical	0	0	junction_1	156.967353293607	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAGAAGGAGGTATGCCT	NA	False	NA	13	True	NA	NA	NA	35046226	35079012	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_35046407_35046504_35046629_35053277_35053452_35077149_35077217_35078926
transcript_57658.known	chr14	+	3053	5	FSM	ENSG00000151327.13	ENST00000280987.9	3053	5	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_1	16.1148223694833	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAATGGTTTGTCTTACTT	35045621	True	NA	10	True	TATAAA	-17	NA	35046271	35083378	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_35046629_35053277_35053452_35077149_35077217_35078926_35079025_35081021
transcript_57662.nic	chr14	+	590	4	ISM	ENSG00000151327.13	ENST00000280987.9	3053	5	94	4366	-12	0	5prime_fragment	FALSE	canonical	3	344	junction_1	18.2086670449969	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAGAAGGAGGTATGCCT	35041794	True	NA	13	True	NA	NA	NA	35046365	35079012	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_35046629_35053277_35053452_35077149_35077217_35078926
transcript_57666.nic	chr14	+	668	3	NIC	ENSG00000151327.13	novel	540	2	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	60.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGGGAATTTTGTATCA	NA	False	NA	9	True	AATAAA	-27	NA	35046226	35050396	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_35046407_35046504_35046629_35050032
transcript_57670.known	chr14	+	540	2	FSM	ENSG00000151327.13	ENST00000554052.2	540	2	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGGGAATTTTGTATCA	35046354	False	NA	9	True	AATAAA	-27	NA	35046452	35050396	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_35046629_35050032
transcript_57671.nic	chr14	-	521	2	ISM	ENSG00000092020.11	ENST00000557278.1	896	6	-69	13763	-25	-11979	5prime_fragment	FALSE	canonical	3	127	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTTTGGGAGGGGCAG	-35122520	False	NA	0	True	NA	NA	NA	35122542	35121901	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_35122102_35122221
transcript_57672.known	chr14	-	1511	13	FSM	ENSG00000092020.11	ENST00000261475.10	1511	13	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_12	31.1644384230203	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATGTTTTGGTTACTGG	-35120453	True	NA	-2	True	AATAAA	-26	NA	35121990	35085471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_35085779_35087950_35088011_35091069_35091208_35095047_35095185_35096557_35096634_35096708_35096765_35099251_35099385_35107303_35107375_35108138_35108237_35109818_35109932_35110524_35110630_35116609_35116738_35121901
transcript_57673.known	chr14	-	712	7	FSM	ENSG00000092020.11	ENST00000555630.5	712	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	114.720554198258	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGATCCTTTAAGAACAG	-35120477	True	NA	NA	False	NA	NA	NA	35122014	35099271	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_35099385_35107303_35107375_35108138_35108237_35109847_35109932_35110524_35110630_35116609_35116738_35121901
transcript_57677.nic	chr14	+	1121	2	ISM	ENSG00000100890.16	ENST00000534898.9	6186	8	-9	153643	-4	632	5prime_fragment	FALSE	canonical	3	210	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTATAATGACTGTATCC	35118474	True	NA	NA	False	AAAAAG	-20	NA	35122542	35123979	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_35122636_35122951
transcript_57681.known	chr14	+	1023	7	FSM	ENSG00000100902.11	ENST00000261479.9	1023	7	0	0	0	0	multi-exon	FALSE	canonical	3	2380	junction_5	135.980901436766	1048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCCTATTTTAAAATTTAT	35266575	True	NA	NA	False	AATAAA	-41	NA	35292381	35317493	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_35292553_35307993_35308089_35308913_35308996_35310739_35310896_35312880_35313060_35314360_35314456_35317248
transcript_57685.known	chr14	+	925	6	FSM	ENSG00000100902.11	ENST00000554541.5	925	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	1035.97247067671	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCTTTTGGAAAATAATTG	35266542	True	NA	NA	False	AATAAA	-5	NA	35292348	35317457	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_35292553_35308913_35308996_35310739_35310896_35312880_35313060_35314360_35314456_35317248
transcript_57687.known	chr14	-	1559	6	FSM	ENSG00000100906.11	ENST00000216797.10	1559	6	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_5	19.5959179422654	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTATCCTGATCATTTT	-35403152	True	NA	-14	True	ATTAAA	-15	NA	35404749	35401512	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_35402061_35402393_35402664_35402770_35402860_35403149_35403361_35403689_35403799_35404417
transcript_57689.known	chr14	-	1400	6	FSM	ENSG00000100906.11	ENST00000557140.5	1400	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	52.6178676876971	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTTATTAAACAGATTT	-35403149	True	NA	3	True	NA	NA	NA	35404746	35401539	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_35402061_35402393_35402535_35402770_35402860_35403149_35403361_35403689_35403799_35404417
transcript_57696.nic	chr14	-	2578	15	ISM	ENSG00000174373.17	ENST00000553892.2	6271	41	-488	174529	-19	5300	5prime_fragment	TRUE	canonical	0	0	junction_1	8.99092513003404	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCACAAAGGGAAAGGTAAGA	-35807816	True	NA	NA	False	NA	NA	NA	35809323	35723040	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_35723265_35725023_35725154_35728361_35728511_35738512_35738651_35742367_35742566_35748584_35748825_35750481_35750691_35752023_35752163_35756792_35756909_35760828_35761007_35762709_35762754_35770941_35771000_35775005_35775056_35775634_35775746_35808729
transcript_57698.nic	chr14	-	2245	13	ISM	ENSG00000174373.17	ENST00000553892.2	6271	41	-488	179829	-19	0	5prime_fragment	FALSE	canonical	2	18	junction_6	6.0184900284226	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTATGTGTTTTTATTG	-35807816	True	NA	NA	False	AAAAAG	-27	NA	35809323	35728340	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_35728511_35738512_35738651_35742367_35742566_35748584_35748825_35750481_35750691_35752023_35752163_35756792_35756909_35760828_35761007_35762709_35762754_35770941_35771000_35775005_35775056_35775634_35775746_35808729
transcript_57699.nic	chr14	-	2134	13	ISM	ENSG00000174373.17	ENST00000553892.2	6271	41	-488	179940	-19	-111	5prime_fragment	FALSE	canonical	2	18	junction_6	6.0184900284226	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCTGGATGAACACACAG	-35807816	True	NA	NA	False	AATAAA	-4	NA	35809323	35728451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_35728511_35738512_35738651_35742367_35742566_35748584_35748825_35750481_35750691_35752023_35752163_35756792_35756909_35760828_35761007_35762709_35762754_35770941_35771000_35775005_35775056_35775634_35775746_35808729
transcript_57700.known	chr14	+	1544	11	FSM	ENSG00000100916.14	ENST00000552677.5	1544	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	63.9240956134696	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAGGCCGATAGAATGT	35824786	True	NA	NA	False	TTTAAA	-36	NA	35826440	35870860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_35826659_35829794_35829908_35831409_35831501_35832977_35833106_35834843_35834924_35862589_35862687_35863869_35863954_35864934_35865000_35865721_35865762_35867905_35868033_35870359
transcript_57703.known	chr14	+	2637	10	FSM	ENSG00000100916.14	ENST00000216807.12	2637	10	0	0	0	0	multi-exon	TRUE	canonical	3	143	junction_6	11.255725566337	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTAGTGTCTTGGATTAC	35824683	True	NA	3	True	AATAAA	-20	NA	35826337	35871963	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_35826659_35831409_35831501_35832977_35833106_35834843_35834924_35862589_35862687_35863869_35863954_35864934_35865000_35865721_35865762_35867905_35868033_35870359
transcript_57710.known	chr14	-	1586	9	FSM	ENSG00000151332.20	ENST00000318473.11	1586	9	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	94.8248385181857	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATCCCTTTGACGGTGTG	-36316124	True	NA	-12	True	AATAAA	-14	NA	36320627	36298567	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_36299188_36300784_36300824_36308091_36308190_36311572_36311726_36311958_36312025_36314511_36314609_36314690_36314916_36316692_36316813_36320459
transcript_57713.known	chr14	-	1449	8	FSM	ENSG00000151332.20	ENST00000359527.11	1449	8	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	117.246295794584	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAATAAACAATAGATCCA	-36316104	True	NA	-34	True	NA	NA	NA	36320607	36298589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_36299191_36300784_36300824_36311572_36311726_36311958_36312025_36314511_36314609_36314690_36314916_36316692_36316813_36320459
transcript_57716.known	chr14	-	853	7	FSM	ENSG00000151332.20	ENST00000604336.5	853	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	128.049035746294	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAACTTGAGGATAAA	-36316094	True	NA	NA	False	NA	NA	NA	36320597	36308156	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_36308190_36311572_36311726_36311958_36312025_36314511_36314609_36314690_36314937_36316692_36316813_36320459
transcript_57718.known	chr14	+	1924	1	FSM	ENSG00000258708.1	ENST00000556667.1	1924	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTTGAAAATGTTTACC	37171874	False	NA	24	True	AATAAA	-36	NA	37171887	37173811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_37171900_37173800
transcript_57719.known	chr14	+	5983	13	FSM	ENSG00000151338.19	ENST00000684589.1	5983	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	5.55965126804031	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATATTTCAATGCAATTC	37196854	True	NA	9	True	AATAAA	-21	NA	37197936	37551259	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_37198105_37247102_37247241_37247828_37247908_37266937_37267170_37268657_37268794_37270419_37270526_37285317_37285448_37308055_37308090_37308348_37308520_37369516_37369625_37422854_37422950_37499907_37500139_37546904
transcript_5773.known	chr1	-	5360	22	FSM	ENSG00000134644.16	ENST00000257075.9	5360	22	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_5	73.5022791076141	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGTGCTTTATTTTAAC	-31052336	True	NA	-2	True	AATACA	-16	NA	31065698	30931505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_30933343_30936642_30936836_30941150_30941273_30941997_30942124_30945345_30945484_30950132_30950262_30952233_30952364_30953713_30953982_30964673_30964911_30965981_30966279_30967166_30967311_30968353_30968493_30974650_30974803_30980061_30980164_30981311_30981406_30992389_30992661_30995053_30995221_31005852_31006032_31006993_31007103_31028795_31028865_31059203_31059578_31065615
transcript_57731.nnic	chr14	+	1193	5	NNC	ENSG00000258649.2	novel	939	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	32.5998466254061	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGACTCCTGCCTCAACA	38185362	True	NA	18	True	AATAAA	-26	NA	38190981	38202925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_+_38191232_38193240_38193324_38196740_38196991_38199045_38199512_38202781
transcript_57734.nnic	chr14	+	943	4	NIC	ENSG00000258649.2	novel	939	4	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_2	14.2672897060218	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGACTCCTGCCTCAACA	38185362	True	NA	18	True	AATAAA	-26	NA	38190981	38202925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_38191232_38193240_38193324_38199045_38199512_38202781
transcript_57735.nnic	chr14	+	834	4	NIC	ENSG00000258649.2	novel	939	4	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_2	29.4882274061286	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGACTCCTGCCTCAACA	38185362	True	NA	18	True	AATAAA	-26	NA	38190981	38202925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_38191232_38193240_38193324_38199154_38199512_38202781
transcript_57738.nnic	chr14	+	999	4	NIC	ENSG00000258649.2	novel	1017	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	20	junction_1	26.1448954015034	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGACTCCTGCCTCAACA	38185363	True	NA	18	True	AATAAA	-26	NA	38190982	38202925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_38191232_38193183_38193324_38199045_38199512_38202781
transcript_57739.nnic	chr14	+	1109	4	NNC	ENSG00000258649.2	novel	859	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	39.1350936571711	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGACTCCTGCCTCAACA	38185363	True	NA	18	True	AATAAA	-26	NA	38190982	38202925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_+_38191232_38196740_38196991_38199045_38199512_38202781
transcript_57740.nnic	chr14	+	1027	3	FSM	ENSG00000258649.2	ENST00000689498.1	859	3	-168	0	-168	0	multi-exon	FALSE	canonical	3	30	junction_1	27	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGACTCCTGCCTCAACA	38190798	False	NA	18	True	AATAAA	-26	NA	38190814	38202925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_38191232_38199045_38199512_38202781
transcript_57746.nnic	chr14	+	750	3	NIC	ENSG00000258649.2	novel	859	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	41	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGACTCCTGCCTCAACA	38185363	True	NA	18	True	AATAAA	-26	NA	38190982	38202925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_38191232_38199154_38199512_38202781
transcript_57760.known	chr14	-	3843	20	FSM	ENSG00000100934.15	ENST00000307712.11	3843	20	0	0	0	0	multi-exon	FALSE	canonical	3	486	junction_15	58.860226943068	332	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGGCTATTTTGAAATC	-39097049	True	NA	-15	True	AATAAA	-18	NA	39103235	39031918	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_39033329_39039030_39039097_39040731_39040888_39042785_39042873_39045162_39045325_39048651_39048730_39055142_39055297_39061764_39061872_39063323_39063414_39064912_39064994_39067172_39067297_39074414_39074531_39075934_39076094_39085761_39085907_39086928_39087009_39091476_39091714_39092540_39092628_39093186_39093245_39095897_39096140_39103031
transcript_57775.known	chr14	+	1320	10	FSM	ENSG00000092208.19	ENST00000308317.12	1320	10	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_5	29.3030146344479	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCACTTTTTTTTTTT	39110338	True	NA	4	True	AATAAA	-22	NA	39114322	39136973	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_39114476_39114828_39114914_39117998_39118089_39118539_39118600_39122429_39122544_39124991_39125037_39128279_39128349_39131957_39132069_39133660_39133720_39136439
transcript_57778.known	chr14	+	825	10	FSM	ENSG00000092208.19	ENST00000412033.7	825	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	125.825668150152	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGCCAATTCAAGTACAG	39110321	True	NA	NA	False	NA	NA	NA	39114305	39136541	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_39114396_39114828_39114914_39117998_39118089_39118539_39118600_39122429_39122544_39124991_39125037_39128279_39128349_39131957_39132069_39133660_39133720_39136439
transcript_57780.known	chr14	+	801	9	FSM	ENSG00000092208.19	ENST00000396249.7	801	9	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_8	121.828709157571	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATAGAAGATATTTCTCAT	39110321	True	NA	NA	False	NA	NA	NA	39114305	39136496	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_39114476_39114828_39114914_39117998_39118089_39118539_39118600_39122429_39122544_39124991_39125037_39128279_39128349_39131957_39132069_39136439
transcript_57784.known	chr14	+	1094	9	FSM	ENSG00000092208.19	ENST00000250379.13	1094	9	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_5	122.823043440553	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTTTTGTTTTTTGTT	39110321	True	NA	26	True	NA	NA	NA	39114305	39136775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_39114476_39114828_39114914_39117998_39118089_39118539_39118600_39122429_39122544_39128279_39128349_39131957_39132069_39133660_39133720_39136439
transcript_57793.known	chr14	-	1000	6	FSM	ENSG00000182400.15	ENST00000555269.5	1000	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	44.8972159493214	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGCCCTTATTTTAAACC	-39167277	True	NA	50	True	AATGAA	-33	NA	39170353	39150117	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_39150382_39151745_39151840_39154210_39154295_39158284_39158403_39159449_39159551_39170014
transcript_57794.known	chr14	-	3251	6	FSM	ENSG00000182400.15	ENST00000330149.10	3251	6	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	12.1095004025765	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATACTTTCGTGATTTTGT	-39167257	True	NA	-5	True	AATAAA	-19	NA	39170333	39147813	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_39150382_39151745_39151840_39154210_39154295_39158284_39158403_39159482_39159551_39170014
transcript_57799.known	chr14	-	3229	5	FSM	ENSG00000182400.15	ENST00000347691.9	3229	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	42.0535373066286	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTTCGTGATTTTGTGG	-39167317	True	NA	-3	True	AATAAA	-21	NA	39170393	39147811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_39150382_39151745_39151840_39158284_39158403_39159482_39159551_39170014
transcript_57802.known	chr14	+	3537	9	FSM	ENSG00000100941.9	ENST00000216832.9	3537	9	0	0	0	0	multi-exon	FALSE	canonical	3	630	junction_8	42.3170695464608	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTTTGCACAGCAATCTG	39165496	True	NA	5	True	ATTAAA	-15	NA	39175253	39183220	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_39175393_39176077_39176150_39176526_39176596_39177411_39177485_39177592_39177688_39177840_39177917_39179090_39179247_39179323_39179463_39180502
transcript_57809.nic	chr14	+	769	8	ISM	ENSG00000100941.9	ENST00000216832.9	3537	9	-58	3866	13	108	5prime_fragment	FALSE	canonical	3	631	junction_4	38.5412580415919	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATTAAATATATAAGAACT	39165438	True	NA	NA	False	AATGAA	-14	NA	39175195	39179354	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_39175393_39176077_39176150_39176526_39176596_39177411_39177485_39177592_39177688_39177840_39177917_39179090_39179247_39179323
transcript_57814.nic	chr14	+	660	7	ISM	ENSG00000100941.9	ENST00000216832.9	3537	9	-88	4082	-17	-108	5prime_fragment	FALSE	canonical	3	631	junction_4	36.5957647822805	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGAGAAAGCAGGTTGA	39175101	False	NA	24	True	NA	NA	NA	39175165	39179138	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_39175393_39176077_39176150_39176526_39176596_39177411_39177485_39177592_39177688_39177840_39177917_39179090
transcript_5782.nic	chr1	-	3969	22	NIC	ENSG00000134644.16	novel	3936	22	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	119	junction_10	88.7621091352644	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAAAAAGG	-31052358	True	NA	5	True	AAAAAG	-5	NA	31065720	30932843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_30933343_30936642_30936836_30941150_30941273_30941997_30942124_30945345_30945484_30950126_30950262_30952233_30952364_30953713_30953982_30964673_30964911_30965981_30966198_30967166_30967311_30968353_30968493_30974650_30974803_30980061_30980164_30981311_30981406_30992389_30992661_30995053_30995221_31005852_31006032_31006993_31007103_31028795_31028865_31059203_31059578_31065615
transcript_57823.known	chr14	+	2526	24	FSM	ENSG00000150527.18	ENST00000556148.5	2526	24	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	34.1810480437423	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTTATGAGTAAATTATT	39264696	True	NA	NA	False	AATAAA	-16	NA	39267410	39350421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_39267523_39276933_39276956_39279336_39279359_39279448_39279538_39291018_39291112_39293270_39293382_39293999_39294072_39294924_39295030_39299863_39299987_39302128_39302250_39303477_39303525_39304290_39304382_39308448_39308588_39313339_39313442_39314738_39314800_39315682_39315719_39317943_39318012_39319208_39319292_39320927_39321057_39326863_39327023_39345903_39346027_39347712_39347772_39348742_39348978_39350097
transcript_57825.known	chr14	+	3860	24	FSM	ENSG00000150527.18	ENST00000280083.7	3860	24	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_18	17.0667542924657	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAAAACTAAAAAGAAA	39267114	False	NA	NA	False	AAAACA	-4	NA	39267145	39351395	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_39267523_39276933_39277066_39279336_39279359_39279448_39279538_39291018_39291097_39293270_39293382_39293999_39294072_39294924_39295030_39299863_39299987_39302128_39302250_39303477_39303525_39304290_39304382_39308448_39308588_39313339_39313442_39314738_39314800_39315682_39315719_39317943_39318012_39319208_39319292_39320927_39321057_39326863_39327023_39345903_39346027_39347712_39347772_39348742_39348978_39350097
transcript_57831.known	chr14	+	2762	23	FSM	ENSG00000150527.18	ENST00000348007.7	2762	23	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_18	19.1583764559984	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGGCTCTATTAACTTTT	39264699	True	NA	19	True	AATAAA	-20	NA	39267413	39350694	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_39267523_39276933_39277066_39279336_39279359_39279448_39279538_39291018_39291097_39293270_39293382_39293999_39294072_39294924_39295030_39299863_39299987_39302128_39302250_39303477_39303525_39304290_39304382_39308448_39308588_39313339_39313442_39314738_39314800_39315682_39315719_39317943_39318012_39319208_39319292_39326863_39327023_39345903_39346027_39347712_39347772_39348742_39348978_39350097
transcript_57835.nic	chr14	+	1538	13	ISM	ENSG00000150527.18	ENST00000348007.7	2762	23	-317	42125	11	-6733	5prime_fragment	FALSE	canonical	3	97	junction_2	12.0956833438858	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATGAAACTCCACAGGT	39267060	True	NA	NA	False	AAGAAA	-2	NA	39267096	39308569	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_39267523_39276933_39277066_39279336_39279359_39279448_39279538_39291018_39291097_39293270_39293382_39293999_39294072_39294924_39295030_39299863_39299987_39302128_39302250_39303477_39303525_39304290_39304382_39308448
transcript_57839.known	chr14	-	3853	4	FSM	ENSG00000165355.8	ENST00000298097.8	3771	4	-67	-15	-34	15	multi-exon	FALSE	canonical	3	42	junction_3	7.36357401145817	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTAGTATTCTGGTTGT	-39432484	False	NA	NA	False	AATAAA	-31	NA	39432500	39397668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_39399788_39401175_39401862_39402400_39402512_39431563
transcript_57845.nnic	chr14	+	786	4	NNC	ENSG00000251363.3	novel	599	4	NA	NA	-270	-42861	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_3	67.0721005088305	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGCTTCTCAATGACT	NA	False	NA	NA	False	AATAAA	-3	NA	40954422	41106448	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_+_40954953_40962789_40962843_40974339_40974391_41106296
transcript_57846.nnic	chr14	+	855	4	NNC	ENSG00000251363.3	novel	599	4	NA	NA	-270	-8255	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_3	51.6978400580398	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCTGACACTTCGTTC	NA	False	NA	0	True	AATAAA	-22	NA	40954422	41141054	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_+_40954953_40962789_40962843_40974339_40974391_41140833
transcript_57847.known	chr14	+	599	4	FSM	ENSG00000251363.3	ENST00000651006.1	599	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_3	46.5999523128034	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACATTTTCACAATTTGAA	40953133	True	NA	-1	True	AATAAA	-11	NA	40954692	41149309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_40954953_40962789_40962843_40974339_40974391_41149074
transcript_57850.nic	chr14	+	2428	3	ISM	ENSG00000251363.3	ENST00000515218.2	696	4	-475	-307	-270	307	intron_retention	FALSE	canonical	3	157	junction_2	11	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAGAAAAATTCAACAGT	NA	False	NA	NA	False	AAGAAA	-2	NA	40954422	40976184	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_40954953_40962789_40962843_40974339
transcript_57851.known	chr14	-	530	2	FSM	ENSG00000258636.2	ENST00000557067.1	530	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAATATCCCATTAAAAAGT	-41604839	False	NA	NA	False	AATAAA	-7	NA	41604856	41587860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_41588288_41604753
transcript_57852.known	chr14	+	4417	6	FSM	ENSG00000165379.14	ENST00000298119.9	4417	6	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	4.60434577328853	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCACATTGCCTGATTTG	41606862	True	NA	10	True	AATAAA	-19	NA	41606875	41904549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_41608563_41766853_41767030_41886605_41888011_41891249_41891963_41898916_41898961_41904157
transcript_57854.nic	chr14	+	2763	2	ISM	ENSG00000165379.14	ENST00000298119.9	4417	6	-303	136923	-303	664	5prime_fragment	FALSE	canonical	2	13	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAATCATATATAGGAAA	41606562	False	NA	NA	False	AAGAAA	-2	NA	41606572	41767626	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_41608563_41766853
transcript_57856.known	chr14	+	2935	5	FSM	ENSG00000179476.8	ENST00000325192.8	2935	5	0	0	0	0	multi-exon	TRUE	canonical	3	54	junction_1	6.05702071979286	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAAGGCTCCCAGATTTTC	44896609	True	NA	17	True	AATAAA	-30	NA	44897274	44907257	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_44897569_44900434_44900960_44903206_44903297_44904394_44904530_44905366
transcript_57861.known	chr14	-	2177	5	FSM	ENSG00000179454.14	ENST00000355081.3	2177	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	8.09320702811932	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGTAAAGACTTT	-44959236	False	NA	NA	False	AGTAAA	-27	NA	44961132	44928812	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_44929192_44931332_44931542_44934114_44934559_44945029_44945929_44960886
transcript_57862.known	chr14	-	6522	5	FSM	ENSG00000179454.14	ENST00000396128.9	6522	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	5.35607132140714	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTATATGTCATATGAT	-44960051	True	NA	-13	True	AATAAA	-14	NA	44961947	44924323	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_44929192_44931332_44931542_44934114_44934559_44945029_44945929_44961845
transcript_57866.nnic	chr14	-	1141	3	NNC	ENSG00000179454.14	novel	847	3	NA	NA	4	7544	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	9	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCAGTCTGTAGTATTCT	-44960067	True	NA	NA	False	AATAAA	-19	NA	44961963	44937688	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_-_44937813_44945029_44945929_44961845
transcript_57868.known	chr14	+	6424	20	FSM	ENSG00000198718.13	ENST00000361462.7	6424	20	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	6.84089058043746	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTGAGAGGTGTCCTG	44961713	True	NA	4	True	AATAAA	-17	NA	44962189	45074431	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_44964468_44995745_44995903_44999362_44999498_45004060_45004367_45006007_45006268_45008912_45009146_45011974_45012076_45025782_45025873_45027298_45027475_45028175_45028330_45032222_45032377_45043685_45043792_45044634_45044871_45046544_45046704_45052435_45052563_45054430_45054550_45066577_45066768_45068423_45068644_45071711_45071799_45073295
transcript_57883.known	chr14	+	3174	15	FSM	ENSG00000185246.18	ENST00000424478.5	3174	15	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	92.8042706617601	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATGAATTTATTTTG	45080390	True	NA	16	True	AATAAA	-21	NA	45084127	45115601	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_45084250_45095220_45095564_45096102_45096229_45096423_45096759_45096886_45097006_45102528_45102697_45107450_45107617_45108414_45108523_45109615_45109781_45110093_45110221_45110548_45110818_45112317_45112503_45114182_45114258_45114493_45114615_45114856
transcript_57891.known	chr14	+	3532	14	FSM	ENSG00000185246.18	ENST00000355765.11	3532	14	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_3	51.6275922741287	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGCCTCTCCCCTACCC	45080378	True	NA	NA	False	NA	NA	NA	45084115	45116282	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_45084250_45095220_45095564_45096102_45096229_45096886_45097006_45102528_45102697_45107450_45107617_45108414_45108523_45109615_45109781_45110093_45110221_45110548_45110818_45112317_45112503_45114182_45114258_45114493_45114615_45114856
transcript_57915.known	chr14	-	1299	7	FSM	ENSG00000100442.11	ENST00000396062.4	1299	7	0	0	0	0	multi-exon	FALSE	canonical	3	2472	junction_2	138.357929540257	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGATGAGTCTTCCGTTTT	-45116203	True	NA	-4	True	AATAAA	-15	NA	45134481	45115598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_45116253_45118027_45118126_45120886_45120955_45121484_45121621_45129793_45129902_45130698_45130801_45134348
transcript_57922.known	chr14	-	1684	8	FSM	ENSG00000100442.11	ENST00000216330.7	1684	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	941.485409079824	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGATGAGTCTTCCGTTT	NA	False	NA	-5	True	AATAAA	-14	NA	45135319	45115599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_45116253_45118027_45118126_45120886_45120955_45121484_45121621_45129793_45129902_45130698_45130801_45134348_45134807_45135258
transcript_57930.known	chr14	+	7131	23	FSM	ENSG00000187790.11	ENST00000267430.10	7131	23	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	8.14588067067192	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCGGGTTATTTCTTC	45134398	True	NA	NA	False	ATTAAA	-21	NA	45135929	45200890	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_45136540_45137068_45137242_45140631_45140710_45148836_45148996_45151396_45151529_45153919_45154053_45154696_45154823_45155372_45155460_45159095_45159281_45164358_45164566_45166949_45167164_45170588_45170747_45173054_45173211_45175070_45176977_45181429_45181525_45181636_45181706_45183773_45183903_45185216_45185374_45187780_45187888_45188801_45189363_45196171_45196548_45198643_45198936_45199869
transcript_57939.known	chr14	+	2354	11	FSM	ENSG00000187790.11	ENST00000556036.5	2354	11	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	6.7446274915669	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAGAAAACAGTTTT	45134408	True	NA	NA	False	ATTAAA	-42	NA	45135939	45167423	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_45136540_45137068_45137242_45140631_45140710_45148836_45148996_45151396_45151529_45153919_45154053_45154696_45154823_45155372_45155460_45159095_45159281_45164358_45164566_45166949
transcript_57943.known	chr14	-	4577	17	FSM	ENSG00000129534.14	ENST00000310806.9	4577	17	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_14	45.4549485067358	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTCTTGTTTTTTGTT	-45245395	True	NA	-11	True	AATAAA	-21	NA	45253202	45203189	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_45204213_45204398_45204454_45206082_45206171_45210379_45210529_45217018_45217180_45218281_45218455_45223917_45224747_45226742_45226837_45227662_45227815_45231140_45231299_45232732_45232821_45235813_45235945_45237647_45237722_45242033_45242519_45242760_45242875_45246742_45247378_45253034
transcript_57949.nic	chr14	-	2746	12	NIC	ENSG00000129534.14	novel	4577	17	NA	NA	-40	2578	combination_of_known_junctions	TRUE	canonical	3	57	junction_11	92.9968452321932	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATTAAAAGGAAAGCTG	-45253220	False	NA	93	True	AAGAAA	-14	NA	45253242	45224247	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_45224747_45226742_45226837_45227662_45227815_45231140_45231299_45232732_45232821_45235813_45235945_45237647_45237722_45242033_45242519_45242760_45242875_45246742_45247378_45250030_45250139_45253034
transcript_57955.nic	chr14	-	2658	11	ISM	ENSG00000129534.14	ENST00000310806.9	4577	17	-60	21058	-60	2578	5prime_fragment	FALSE	canonical	3	225	junction_8	34.6654006179072	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATTAAAAGGAAAGCTG	-45253240	False	NA	93	True	AAGAAA	-14	NA	45253262	45224247	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_45224747_45226742_45226837_45227662_45227815_45231140_45231299_45232732_45232821_45235813_45235945_45237647_45237722_45242033_45242519_45242760_45242875_45246742_45247378_45253034
transcript_57956.nic	chr14	-	2509	11	ISM	ENSG00000129534.14	ENST00000310806.9	4577	17	0	21147	0	2489	5prime_fragment	FALSE	canonical	3	225	junction_8	34.6654006179072	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTGAAGAAAATAGAAAATCA	-45245395	True	NA	4	True	AAGAAA	-22	NA	45253202	45224336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_45224747_45226742_45226837_45227662_45227815_45231140_45231299_45232732_45232821_45235813_45235945_45237647_45237722_45242033_45242519_45242760_45242875_45246742_45247378_45253034
transcript_57957.known	chr14	-	2131	11	FSM	ENSG00000129534.14	ENST00000454990.5	2131	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	114.339144653089	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAATATAAAATGT	-45245391	True	NA	NA	False	AATAAA	-37	NA	45253198	45226825	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_45226837_45227662_45227815_45231140_45231299_45232508_45232628_45232732_45232821_45235813_45235945_45237647_45237722_45242033_45242519_45242760_45242875_45246742_45247378_45253034
transcript_57959.nic	chr14	-	2218	11	NIC	ENSG00000129534.14	novel	2131	11	NA	NA	-40	54	combination_of_known_junctions	FALSE	canonical	3	57	junction_10	97.4195052338083	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAGGATAATAAAAAGTC	-45253220	False	NA	NA	False	TATAAA	-39	NA	45253242	45226771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_45226837_45227662_45227815_45231140_45231299_45232732_45232821_45235813_45235945_45237647_45237722_45242033_45242519_45242760_45242875_45246742_45247378_45250030_45250139_45253034
transcript_5796.nic	chr1	-	3967	22	NIC	ENSG00000134644.16	novel	5360	22	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	119	junction_10	89.7210592933767	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAAAAAGG	-31052362	True	NA	5	True	AAAAAG	-5	NA	31065724	30932843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_30933343_30936642_30936836_30941150_30941273_30941997_30942124_30945345_30945484_30950132_30950262_30952233_30952364_30953713_30953982_30964673_30964911_30965981_30966198_30967166_30967311_30968353_30968493_30974650_30974803_30980061_30980164_30981311_30981406_30992389_30992661_30995053_30995221_31005852_31006032_31006993_31007103_31028795_31028865_31059203_31059578_31065615
transcript_57961.nic	chr14	-	2130	10	ISM	ENSG00000129534.14	ENST00000310806.9	4577	17	-60	23582	-60	54	5prime_fragment	FALSE	canonical	3	225	junction_7	35.7211421989835	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAGGATAATAAAAAGTC	-45253240	False	NA	NA	False	TATAAA	-39	NA	45253262	45226771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_45226837_45227662_45227815_45231140_45231299_45232732_45232821_45235813_45235945_45237647_45237722_45242033_45242519_45242760_45242875_45246742_45247378_45253034
transcript_57965.nic	chr14	-	2129	10	NIC	ENSG00000129534.14	novel	2131	11	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_9	99.3612936040321	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGGAGATGACTTATCTAA	-45253220	False	NA	NA	False	AGTAAA	-20	NA	45253242	45227686	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_45227815_45231140_45231299_45232732_45232821_45235813_45235945_45237647_45237722_45242033_45242519_45242760_45242875_45246742_45247378_45250030_45250139_45253034
transcript_57968.nic	chr14	-	2041	9	ISM	ENSG00000129534.14	ENST00000310806.9	4577	17	-60	24497	-60	0	5prime_fragment	FALSE	canonical	3	225	junction_6	35.7226731222623	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGGAGATGACTTATCTAA	-45253240	False	NA	NA	False	AGTAAA	-20	NA	45253262	45227686	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_45227815_45231140_45231299_45232732_45232821_45235813_45235945_45237647_45237722_45242033_45242519_45242760_45242875_45246742_45247378_45253034
transcript_57971.nic	chr14	-	1739	8	ISM	ENSG00000129534.14	ENST00000310806.9	4577	17	0	28065	0	1318	5prime_fragment	FALSE	canonical	3	225	junction_5	38.186438451794	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAAGATCTGTCCGTGAC	-45245395	True	NA	NA	False	AAAACA	-6	NA	45253202	45231254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_45231299_45232732_45232821_45235813_45235945_45237647_45237722_45242033_45242519_45242760_45242875_45246742_45247378_45253034
transcript_57973.known	chr14	-	1950	8	FSM	ENSG00000129534.14	ENST00000627697.1	1950	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	100.666959498605	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCCTGTCTCAGCCTCCC	-45253380	False	NA	NA	False	NA	NA	NA	45253402	45232572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_45232628_45232732_45232821_45235813_45235945_45237647_45237722_45242033_45242519_45242760_45242875_45246742_45247378_45253034
transcript_5798.nic	chr1	-	3964	22	NIC	ENSG00000134644.16	novel	3936	22	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	119	junction_10	100.173953010141	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAAAAAGG	-31052356	True	NA	5	True	AAAAAG	-5	NA	31065718	30932843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_30933343_30936642_30936836_30941150_30941273_30941997_30942124_30945345_30945484_30950132_30950262_30952233_30952364_30953713_30953982_30964673_30964911_30965981_30966198_30967166_30967311_30968353_30968493_30974650_30974803_30980061_30980167_30981311_30981406_30992389_30992661_30995053_30995221_31005852_31006032_31006993_31007103_31028795_31028865_31059203_31059578_31065615
transcript_57980.known	chr14	-	808	3	FSM	ENSG00000129534.14	ENST00000451174.1	808	3	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	5.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTGCAGCATACCTAC	-45245370	True	NA	NA	False	AATGAA	-29	NA	45253177	45246820	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_45247378_45250030_45250139_45253034
transcript_57986.known	chr14	+	351	1	FSM	ENSG00000258608.1	ENST00000555084.1	351	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAATGTATGATGAATTT	NA	False	NA	NA	False	AATGAA	-37	NA	45290035	45290386	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_45290000_45290400
transcript_58.known	ERCC-00158	+	1012	1	FSM	ERCC-00158A	DQ516795	1012	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1012	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00158_+_0_1000
transcript_58001.known	chr14	+	1502	4	FSM	ENSG00000165501.17	ENST00000298288.11	1502	4	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_2	96.858430482615	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTGTTAACTTTTTTT	49592057	True	NA	10	True	ATTAAA	-17	NA	49598939	49614672	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_49599204_49602369_49602469_49607399_49608122_49614255
transcript_58005.known	chr14	+	957	3	FSM	ENSG00000165501.17	ENST00000318317.8	957	3	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_2	128.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGTGTTAACTTTTT	49598746	False	NA	8	True	ATTAAA	-15	NA	49598760	49614670	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_49599204_49602369_49602469_49614255
transcript_58007.known	chr14	-	7062	3	FSM	ENSG00000213741.11	ENST00000396020.7	7062	3	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	11584.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTTCTATGTGATGGT	-49559448	True	NA	1	True	AATAAA	-29	NA	49586376	49570983	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_49577854_49585949_49586050_49586284
transcript_58008.known	chr14	-	295	3	FSM	ENSG00000213741.11	ENST00000245458.11	295	3	0	0	0	0	multi-exon	FALSE	canonical	3	17884	junction_1	2690.5	2586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGTTTATGAGTGTTCT	-49559452	True	NA	-33	True	AATAAA	-15	NA	49586380	49583576	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_49583676_49585949_49586050_49586284
transcript_58009.known	chr14	+	299	1	FSM	ENSG00000276168.1	ENST00000618786.1	299	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAACAATAAATACGTTA	49576213	True	NA	10	True	NA	NA	NA	49586579	49586878	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_49586600_49586900
transcript_58010.known	chr14	-	676	2	FSM	ENSG00000165502.7	ENST00000298289.7	676	2	0	0	0	0	multi-exon	FALSE	canonical	3	5859	junction_1	0	1462	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCTTAGAAGGATCTTTA	-49559862	True	NA	NA	False	CATAAA	-7	NA	49620626	49618529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_49619141_49620561
transcript_58011.known	chr14	+	2683	1	FSM	ENSG00000168282.6	ENST00000305386.4	2683	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCTGTGCAAGAAACTGT	49617407	True	NA	7	True	AATAAA	-21	NA	49620798	49623481	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_49620800_49623500
transcript_58019.known	chr14	-	2977	3	FSM	ENSG00000165506.15	ENST00000298292.13	2977	3	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_1	20.5	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTTTGTCACACAAAGT	-49635192	True	NA	-15	True	AATAAA	-20	NA	49635244	49625173	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_49626049_49628011_49628156_49633286
transcript_58020.known	chr14	-	2819	2	FSM	ENSG00000165506.15	ENST00000406043.3	2819	2	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_1	0	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTTTGTCACACAAAGT	-49635178	True	NA	-15	True	AATAAA	-20	NA	49635230	49625173	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_49626049_49633286
transcript_58021.known	chr14	-	1692	19	FSM	ENSG00000100479.13	ENST00000216367.10	1692	19	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	11.1366373451785	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGTTCTGCTTAAATTTG	-49687433	True	NA	-13	True	AATAAA	-17	NA	49688214	49643554	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_49643671_49647292_49647361_49650264_49650442_49651268_49651378_49653989_49654068_49654154_49654215_49654783_49654839_49655004_49655095_49655670_49655844_49663314_49663388_49664625_49664675_49665106_49665164_49666329_49666414_49669523_49669599_49674122_49674217_49674349_49674428_49679724_49679801_49683592_49683694_49688135
transcript_58023.known	chr14	-	1792	18	FSM	ENSG00000100479.13	ENST00000539565.6	1792	18	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_15	19.596624241458	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATATTACAATAAAATTATG	NA	False	NA	-43	True	AAGAAA	-43	NA	49688422	49643584	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_49643671_49647292_49647361_49650264_49650442_49651268_49651378_49653989_49654068_49654154_49654215_49654783_49654839_49655004_49655095_49655670_49655844_49663314_49663388_49664625_49664675_49665106_49665164_49666329_49666414_49669523_49669599_49674122_49674217_49679724_49679801_49683592_49683694_49688135
transcript_58028.known	chr14	+	4969	13	FSM	ENSG00000165516.11	ENST00000298307.10	4969	13	0	0	0	0	multi-exon	FALSE	canonical	3	582	junction_6	74.942199949917	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTGGTGCTGAAGTATAA	49765558	True	NA	27	True	AATAAA	-19	NA	49768152	49786385	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_49768622_49771593_49771674_49774560_49774679_49777838_49777955_49778177_49778260_49778410_49778495_49779594_49779676_49779747_49779807_49780212_49780323_49780702_49780776_49782369_49782458_49782541_49782595_49782829
transcript_58029.nnic	chr14	+	2334	13	NNC	ENSG00000165516.11	novel	4969	13	NA	NA	-563	-471	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_12	189.886515816392	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGGATATTACCTGAGT	49767536	True	NA	NA	False	AAAAAG	-9	NA	49767566	49785914	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_+_49768622_49771593_49771674_49774560_49774679_49777838_49777955_49778177_49778260_49778410_49778495_49779594_49779676_49779747_49779807_49780212_49780323_49780702_49780776_49782369_49782458_49782541_49782595_49785579
transcript_5803.nic	chr1	-	4051	22	NIC	ENSG00000134644.16	novel	5375	22	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	144	junction_14	86.3985649078767	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAAAAAGG	-31052362	True	NA	5	True	AAAAAG	-5	NA	31065724	30932843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_30933343_30936642_30936836_30941150_30941273_30941997_30942124_30945345_30945484_30950132_30950262_30952233_30952364_30953713_30953982_30964673_30964911_30965981_30966279_30967166_30967311_30968353_30968493_30974650_30974803_30980061_30980167_30981311_30981406_30992389_30992661_30995053_30995221_31005852_31006032_31006993_31007103_31028795_31028865_31059203_31059578_31065615
transcript_58033.known	chr14	+	1756	12	FSM	ENSG00000165516.11	ENST00000555443.5	1756	12	0	0	0	0	multi-exon	FALSE	canonical	3	582	junction_6	76.4049671701027	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAATAAATGTATTTAACA	49765573	True	NA	-8	True	NA	NA	NA	49768167	49783115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_49768622_49771593_49771674_49774560_49774679_49777838_49777955_49778177_49778260_49778410_49778495_49779594_49779807_49780212_49780323_49780702_49780776_49782369_49782458_49782541_49782595_49782829
transcript_58035.known	chr14	-	300	1	FSM	ENSG00000274012.1	ENST00000490232.3	300	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCCCCTCCCTCATTAA	-49855828	True	NA	-2	True	NA	NA	NA	49862849	49862549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_49862500_49862800
transcript_58036.known	chr14	-	1486	2	FSM	ENSG00000282885.2	ENST00000655317.1	1486	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGCTTCTGGGTCTGCC	-49862801	False	NA	NA	False	AATAAA	-17	NA	49862864	49861175	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_49862317_49862519
transcript_58037.known	chr14	+	3875	2	FSM	ENSG00000165527.8	ENST00000298316.7	3875	2	0	0	0	0	multi-exon	FALSE	canonical	3	1098	junction_1	0	298	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTCACGTTATGTTACT	49884759	True	NA	17	True	AATAAA	-17	NA	49893081	49897054	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_49893158_49893255
transcript_58040.known	chr14	-	1772	6	FSM	ENSG00000100483.14	ENST00000395860.7	1772	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_4	22.3015694514982	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTGACTGTGAATTTCA	-50115051	True	NA	-7	True	AATAAA	-15	NA	50116572	50108636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_50109714_50112614_50112720_50114284_50114405_50115838_50115912_50116068_50116180_50116286
transcript_58041.known	chr14	-	1793	6	FSM	ENSG00000100483.14	ENST00000491402.5	1793	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_4	19.8131269616888	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACTGTGAATTTCAGAAA	-50115079	True	NA	-3	True	AATAAA	-19	NA	50116600	50108632	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_50109714_50112614_50112720_50114284_50114405_50115838_50115912_50116079_50116180_50116286
transcript_58042.known	chr14	-	795	5	FSM	ENSG00000100483.14	ENST00000395859.2	795	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	33.1087224157019	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACGAAAAATTCCTGCTTG	-50115079	True	NA	NA	False	GGGGCT	-8	NA	50116600	50109536	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_50109714_50114284_50114405_50115838_50115912_50116068_50116180_50116286
transcript_58044.known	chr14	-	1849	5	FSM	ENSG00000100483.14	ENST00000484763.1	1849	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_4	19.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACCTTGTGACTGTGAA	-50115037	True	NA	-12	True	AATAAA	-10	NA	50116558	50108641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_50109714_50112614_50112720_50114284_50114405_50115838_50115912_50116079
transcript_58059.known	chr14	-	1958	11	FSM	ENSG00000087299.12	ENST00000421284.7	1958	11	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	9.54986910905066	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTTAATTTTGAAGAGT	-50309652	True	NA	-107	True	AATACA	-18	NA	50312229	50245650	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_50246121_50247040_50247254_50265357_50265490_50267752_50267911_50269162_50269331_50278519_50278555_50283870_50284034_50294114_50294247_50302016_50302169_50302901_50303018_50312010
transcript_58066.known	chr14	-	6095	10	FSM	ENSG00000087299.12	ENST00000267436.9	6095	10	0	0	0	0	multi-exon	TRUE	canonical	3	50	junction_4	8.5764535535124	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTTTGTCCCTGGGAT	-50309652	True	NA	-5	True	ATTAAA	-16	NA	50312229	50242433	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_50247254_50265357_50265490_50267752_50267911_50269162_50269331_50278519_50278555_50283870_50284034_50294114_50294247_50302016_50302169_50302901_50303018_50312010
transcript_58074.known	chr14	+	2944	6	FSM	ENSG00000125375.18	ENST00000557421.7	2944	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	64.8320908192849	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTGGAGATTTCATACC	50311106	True	NA	13	True	AATAAA	-25	NA	50312323	50327957	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_50312390_50314590_50314627_50321482_50321595_50322510_50322720_50323944_50324117_50325608
transcript_58078.known	chr14	+	2908	5	FSM	ENSG00000125375.18	ENST00000554438.6	2908	5	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_4	35.2526594741446	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTGGAGATTTCATACC	50311106	True	NA	13	True	AATAAA	-25	NA	50312323	50327957	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_50312390_50321482_50321595_50322510_50322720_50323944_50324117_50325608
transcript_58090.nic	chr14	+	583	3	ISM	ENSG00000125375.18	ENST00000555939.6	719	5	-23	1814	-23	0	5prime_fragment	FALSE	canonical	3	145	junction_1	33	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTTCCTCTCCTTCCTC	50311083	True	NA	5	True	ATTAAA	-13	NA	50312300	50322892	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_50312390_50321482_50321595_50322510
transcript_58091.known	chr14	-	4354	33	FSM	ENSG00000012983.12	ENST00000013125.9	4354	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	53.3476858536291	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATATAAAGTTATTTATT	-50526973	True	NA	-52	True	AATAAA	-14	NA	50532609	50418524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_50420107_50423120_50423177_50425906_50425978_50428661_50428755_50429191_50429261_50434393_50434572_50434961_50435066_50437475_50437535_50437893_50438009_50438091_50438095_50440012_50440074_50440361_50440442_50442731_50442817_50443728_50443771_50443938_50444037_50445040_50445195_50446078_50446122_50447413_50447482_50448773_50448833_50456515_50456595_50462664_50462782_50464051_50464134_50466582_50466646_50468650_50468783_50475076_50475150_50476127_50476171_50476258_50476307_50482360_50482417_50485577_50485643_50486103_50486195_50504799_50504858_50531941_50532159_50532399
transcript_58092.known	chr14	-	4270	33	FSM	ENSG00000012983.12	ENST00000682126.1	4270	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	49.3276275909353	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAAGTTATTTATTCTTT	-50526933	True	NA	-48	True	AATAAA	-18	NA	50532569	50418520	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_50420107_50423120_50423177_50425906_50425978_50428661_50428755_50429191_50429261_50434393_50434572_50434961_50435066_50437475_50437535_50437893_50438009_50438091_50438095_50440012_50440074_50440361_50440442_50442731_50442817_50443728_50443771_50443938_50444037_50445040_50445195_50446078_50446122_50447413_50447482_50448773_50448833_50456515_50456595_50462664_50462782_50464051_50464134_50466582_50466646_50468650_50468783_50475076_50475150_50476127_50476171_50476258_50476307_50482360_50482417_50485577_50485643_50486103_50486195_50504799_50504858_50531941_50532159_50532447
transcript_58105.nic	chr14	-	1200	12	ISM	ENSG00000012983.12	ENST00000013125.9	4354	33	-88	45553	-78	0	5prime_fragment	FALSE	canonical	3	53	junction_11	46.650272602465	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCAACTGCTGAAAGACTT	-50527061	False	NA	NA	False	NA	NA	NA	50532697	50464077	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_50464134_50466582_50466646_50468650_50468783_50475076_50475150_50476127_50476171_50476258_50476307_50482360_50482417_50485577_50485643_50486103_50486195_50504799_50504858_50531941_50532159_50532399
transcript_58106.nic	chr14	-	1193	12	ISM	ENSG00000012983.12	ENST00000557390.6	3277	33	-119	44518	-119	0	5prime_fragment	FALSE	canonical	3	116	junction_11	31.0507449239238	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCAACTGCTGAAAGACTT	NA	False	NA	NA	False	NA	NA	NA	50532738	50464077	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_50464134_50466582_50466646_50468650_50468783_50475076_50475150_50476127_50476171_50476258_50476307_50482360_50482417_50485577_50485643_50486103_50486195_50504799_50504858_50531941_50532159_50532447
transcript_58108.nic	chr14	-	869	9	ISM	ENSG00000012983.12	ENST00000557390.6	3277	33	-61	55532	-61	0	5prime_fragment	FALSE	canonical	3	116	junction_8	35.0891721190455	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCACCCCTTACTGGTAAG	-50527044	True	NA	NA	False	NA	NA	NA	50532680	50475091	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_50475150_50476127_50476171_50476258_50476307_50482360_50482417_50485577_50485643_50486103_50486195_50504799_50504858_50531941_50532159_50532447
transcript_58111.known	chr14	+	2853	14	FSM	ENSG00000198513.14	ENST00000441560.6	2853	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.83292380386141	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTACTGAATTTGAAAAT	50532963	False	NA	NA	False	ATTAAA	-32	NA	50533025	50633049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_50533368_50560126_50560300_50587830_50588079_50590940_50591076_50591534_50591640_50593845_50593897_50595575_50595633_50613258_50613352_50614372_50614512_50620598_50620727_50621842_50621900_50623176_50623249_50628030_50628463_50632228
transcript_58115.known	chr14	-	3094	5	FSM	ENSG00000151748.15	ENST00000324679.5	3094	5	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_1	33.2001506020681	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAAGGCCATAGACAAAG	-50655101	True	NA	54	True	NA	NA	NA	50668306	50633579	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_50635385_50640749_50640894_50644743_50645015_50665178_50665620_50667873
transcript_58120.nic	chr14	-	1651	2	ISM	ENSG00000151748.15	ENST00000324679.5	3094	5	-36	30858	-36	-182	5prime_fragment	FALSE	canonical	3	415	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAACTTTCTTGTCTGATT	-50655137	True	NA	NA	False	GATAAA	-18	NA	50668342	50664437	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_50665620_50667873
transcript_58121.known	chr14	-	6496	30	FSM	ENSG00000100503.26	ENST00000382041.7	6496	30	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_26	16.3041834246998	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATTATAAATGTCTGTA	-50829507	True	NA	-22	True	AATAAA	-7	NA	50831121	50725839	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_50726067_50729522_50729724_50735515_50735618_50738139_50738287_50739307_50739488_50741581_50741729_50743415_50743530_50744242_50744366_50747991_50748106_50752517_50752734_50754562_50754633_50754741_50754868_50756491_50758631_50759856_50760360_50761789_50761912_50763825_50763965_50766306_50766397_50766779_50766891_50770387_50770563_50770851_50770993_50771331_50771469_50772300_50772469_50772948_50773096_50776948_50777140_50778764_50778805_50792711_50792882_50806736_50806819_50821873_50822078_50830463_50830518_50831005
transcript_58122.known	chr14	-	4364	29	FSM	ENSG00000100503.26	ENST00000324330.13	4364	29	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_12	17.1182487064393	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATGTCTGTAAGAACTT	-50829507	True	NA	-15	True	AATAAA	-14	NA	50831121	50725832	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_50726067_50729522_50729724_50735515_50735618_50738139_50738287_50739307_50739488_50741581_50741729_50743415_50743530_50744242_50744366_50747991_50748106_50752517_50752734_50754562_50754633_50754741_50754868_50759856_50760360_50761789_50761912_50763825_50763965_50766306_50766397_50766779_50766891_50770387_50770563_50770851_50770993_50771331_50771469_50772300_50772469_50772948_50773096_50776948_50777140_50778764_50778805_50792711_50792882_50806736_50806819_50821873_50822078_50830463_50830518_50831005
transcript_58124.nic	chr14	-	2614	17	ISM	ENSG00000100503.26	ENST00000382041.7	6496	30	-65	34058	-24	-2110	5prime_fragment	FALSE	canonical	3	25	junction_13	5.01521123682742	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTCTTGGAAAAGCACCA	-50829572	True	NA	NA	False	AAGAAA	-2	NA	50831186	50759897	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_50760360_50761789_50761912_50763825_50763965_50766306_50766397_50766779_50766891_50770387_50770563_50770851_50770993_50771331_50771469_50772300_50772469_50772948_50773096_50776948_50777140_50778764_50778805_50792711_50792882_50806736_50806819_50821873_50822078_50830463_50830518_50831005
transcript_58128.nic	chr14	-	2261	17	ISM	ENSG00000100503.26	ENST00000382041.7	6496	30	-65	34411	-24	-2463	5prime_fragment	FALSE	canonical	3	25	junction_13	5.01521123682742	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGTGACCTTAAAAATGAA	-50829572	True	NA	NA	False	AAAACA	-3	NA	50831186	50760250	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_50760360_50761789_50761912_50763825_50763965_50766306_50766397_50766779_50766891_50770387_50770563_50770851_50770993_50771331_50771469_50772300_50772469_50772948_50773096_50776948_50777140_50778764_50778805_50792711_50792882_50806736_50806819_50821873_50822078_50830463_50830518_50831005
transcript_58139.known	chr14	-	2799	20	FSM	ENSG00000100504.17	ENST00000216392.8	2799	20	0	0	0	0	multi-exon	TRUE	canonical	3	277	junction_13	53.0823329557223	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAGTGCCAAAACTTATT	-50934156	True	NA	-26	True	AATAAA	-21	NA	50944483	50905216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_50905557_50908270_50908338_50908820_50908956_50909894_50910103_50911729_50911872_50911977_50912037_50912155_50912304_50913028_50913131_50914700_50914816_50915335_50915500_50915824_50915972_50916641_50916735_50916961_50917106_50920540_50920624_50920955_50921068_50923968_50924101_50931672_50931777_50935106_50935186_50937735_50937838_50944160
transcript_58146.known	chr14	-	2696	19	FSM	ENSG00000100504.17	ENST00000544180.6	2696	19	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_18	93.2326176166599	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGAGTGCCAAAACTTAT	-50934156	True	NA	-27	True	AATAAA	-20	NA	50944483	50905217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_50905557_50908270_50908338_50908820_50908956_50909894_50910103_50911729_50911872_50911977_50912037_50912155_50912304_50913028_50913131_50914700_50914816_50915335_50915500_50915824_50915972_50916641_50916735_50916961_50917106_50920540_50920624_50920955_50921068_50923968_50924101_50931672_50931777_50935106_50935186_50944160
transcript_58159.known	chr14	+	1477	11	FSM	ENSG00000131969.15	ENST00000353130.5	1477	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	121.734300835878	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTATGCCATTTTGT	50871832	True	NA	21	True	AATAAA	-21	NA	50872159	50904970	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_50872279_50880451_50880572_50881595_50881627_50885613_50885660_50885765_50885896_50886646_50886685_50888823_50888904_50901828_50901912_50903388_50903468_50904073_50904193_50904338
transcript_58165.known	chr14	+	850	6	FSM	ENSG00000131969.15	ENST00000554566.5	850	6	0	0	0	0	multi-exon	FALSE	canonical	2	42	junction_1	100.260460800856	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAACATGCTGAAACCTCA	50893070	False	NA	NA	False	NA	NA	NA	50893581	50904571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_50893759_50895563_50895723_50901828_50901912_50903388_50903468_50904073_50904193_50904338
transcript_58169.known	chr14	-	1459	5	FSM	ENSG00000100504.17	ENST00000530336.2	1459	5	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_3	15.6044865343272	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTACACTGTGGGTCCCA	-50934143	True	NA	14	True	AATAAA	-43	NA	50944470	50923236	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_50924101_50931672_50931777_50935106_50935186_50937735_50937838_50944160
transcript_58176.known	chr14	-	5284	10	FSM	ENSG00000100505.14	ENST00000298355.7	5284	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	7.76665871880057	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTCTAGAATTTCTTAG	NA	False	NA	NA	False	AATAAA	-22	NA	51096061	50975261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_50977354_50979386_50979550_50981799_50982104_50998049_50998189_51000682_51000841_51009079_51009234_51010383_51010495_51022834_51022958_51025264_51025361_51094117
transcript_58183.known	chr14	-	3726	7	FSM	ENSG00000100505.14	ENST00000360392.4	3726	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	3.13138237134266	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTTTGTTCTATTTGT	-51094649	True	NA	0	True	AATAAA	-26	NA	51095076	50996063	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_50998189_51000682_51000841_51009079_51009234_51010383_51010495_51022834_51022958_51025264_51025361_51094117
transcript_58188.known	chr14	+	4025	8	FSM	ENSG00000139921.13	ENST00000457354.7	4025	8	0	0	0	0	multi-exon	FALSE	canonical	3	1038	junction_7	80.7455059721213	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGCAAAGTCAGATTATATA	51227117	True	NA	36	True	AATAAA	-30	NA	51240246	51257655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_51240445_51243855_51243972_51245312_51245359_51247091_51247221_51249325_51249372_51249467_51249570_51249692_51249766_51254340
transcript_58191.known	chr14	+	2117	8	FSM	ENSG00000139921.13	ENST00000556683.1	2117	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	405.283674902971	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATATTATCCTGTGTTC	51227120	True	NA	21	True	TTTAAA	-34	NA	51240249	51255654	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_51240445_51243855_51243972_51245312_51245455_51247091_51247221_51249325_51249372_51249467_51249570_51249692_51249766_51254340
transcript_58200.known	chr14	+	4828	14	FSM	ENSG00000139926.16	ENST00000395718.6	4828	14	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_4	10.4099406292892	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCTTTTTGATTATTAGA	51650261	True	NA	21	True	AATAAA	-21	NA	51651857	51730727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_51651997_51689690_51689936_51698141_51698233_51701055_51701136_51702511_51702589_51704748_51704936_51708077_51708234_51711530_51711597_51712482_51712552_51715324_51715500_51720054_51720391_51721948_51722081_51725778_51725871_51727744
transcript_58202.known	chr14	+	4800	14	FSM	ENSG00000139926.16	ENST00000344768.10	4800	14	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	13.3797515477415	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCTTTTTGATTATTAGA	51650313	True	NA	21	True	AATAAA	-21	NA	51651909	51730727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_51651997_51689690_51689936_51698141_51698233_51701055_51701160_51702511_51702589_51704748_51704936_51708077_51708234_51711530_51711597_51712482_51712552_51715324_51715500_51720054_51720391_51721948_51722081_51725778_51725871_51727744
transcript_58211.known	chr14	+	2125	4	FSM	ENSG00000186469.9	ENST00000556766.6	3573	4	34	1414	4	1220	multi-exon	FALSE	canonical	3	75	junction_2	5.71547606649408	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGGAAGAGAAAAAGTT	51859006	True	NA	NA	False	AAAAAG	-5	NA	51860645	51968381	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_51860791_51877616_51877658_51950649_51950766_51966558
transcript_58213.known	chr14	+	3729	3	FSM	ENSG00000186469.9	ENST00000335281.8	3729	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	33.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCATATGCAGTCAATTT	NA	False	NA	7	True	AATAAA	-17	NA	51860413	51969794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_51860791_51950649_51950766_51966558
transcript_58214.known	chr14	-	4870	22	FSM	ENSG00000087303.19	ENST00000216286.10	4870	22	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_10	7.02021699892661	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATGACTTAAGGATCTAT	-52068338	True	NA	-6	True	AATAAA	-15	NA	52069059	52004808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_52005497_52005736_52005850_52006536_52006661_52007809_52007968_52010875_52011048_52011553_52011684_52014286_52014457_52015053_52015276_52019060_52019295_52020058_52020179_52027200_52027345_52028721_52028851_52029546_52029691_52038746_52038978_52040650_52040852_52042104_52042351_52042781_52042932_52053578_52053939_52054019_52054322_52060123_52060357_52067857_52068164_52068766
transcript_58220.known	chr14	+	7007	8	FSM	ENSG00000087302.9	ENST00000261700.8	7007	8	0	0	0	0	multi-exon	FALSE	canonical	3	2149	junction_3	98.0840955298991	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGACCTTGTCTTTTCCTAG	51968923	True	NA	NA	False	AATAAA	-21	NA	51989545	52010694	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_51989701_51991316_51991442_51993722_51993823_51998493_51998581_51999707_51999797_52001797_52001867_52004193_52004243_52004361
transcript_58221.known	chr14	+	851	8	FSM	ENSG00000087302.9	ENST00000556760.5	851	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	817.639759007721	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTATTGCTTTTTTCTT	51968992	True	NA	2	True	NA	NA	NA	51989614	52004653	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_51989701_51991316_51991442_51993722_51993823_51998493_51998581_51999707_51999797_52001797_52001867_52004239_52004243_52004361
transcript_58227.known	chr14	+	2458	2	FSM	ENSG00000125384.7	ENST00000245457.6	2458	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAAAATGGAGTAGTATT	52314187	True	NA	NA	False	AATAAA	-15	NA	52314311	52328598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_52315392_52327220
transcript_58229.known	chr14	-	4557	21	FSM	ENSG00000087301.9	ENST00000281741.9	4557	21	0	0	0	0	multi-exon	TRUE	canonical	3	51	junction_9	8.99666604915399	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCACAAGCCTCCTTTAG	-52550259	True	NA	-5	True	AATAAA	-20	NA	52552505	52430595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_52432588_52439203_52439395_52440563_52440725_52455323_52455463_52457089_52457175_52470036_52470174_52470511_52470681_52482229_52482290_52482821_52482966_52488362_52488487_52490390_52490452_52490838_52491006_52511239_52511391_52514879_52514971_52519171_52519294_52536718_52536794_52537598_52537673_52542370_52542454_52543397_52543631_52544263_52544372_52552315
transcript_58231.nic	chr14	-	307	2	ISM	ENSG00000087301.9	ENST00000281741.9	4557	21	-42	113701	-25	-55934	5prime_fragment	FALSE	canonical	3	86	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTAACAGCAGATACAGA	-52550301	True	NA	NA	False	AATAAA	-1	NA	52552547	52544296	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_52544372_52552315
transcript_58233.known	chr14	+	2808	8	FSM	ENSG00000180998.12	ENST00000542169.6	2808	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4.65109159888563	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATGACTTTGTATTCAA	52553094	False	NA	3	True	AATAAA	-19	NA	52553287	52636725	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_52553592_52598271_52598316_52600112_52600342_52613670_52613719_52632159_52632310_52633529_52633656_52633827_52633947_52634937
transcript_58234.known	chr14	+	4200	7	FSM	ENSG00000180998.12	ENST00000321662.11	4200	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	2.92498812913071	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGAGTTCTGGTTTTCTT	52552644	True	NA	4	True	AATAAA	-17	NA	52552835	52637713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_52553592_52598271_52598316_52600112_52600342_52632159_52632310_52633529_52633656_52633827_52633947_52634937
transcript_58236.known	chr14	-	5139	16	FSM	ENSG00000197930.13	ENST00000395686.8	5139	16	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_4	18.3782480122562	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGGTGTGGTTTTTGGT	-52695380	False	NA	0	True	AATAAA	-18	NA	52695558	52639914	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_52643631_52646153_52646288_52646374_52646462_52652238_52652309_52653068_52653316_52657916_52658010_52658123_52658151_52661292_52661305_52663800_52663848_52666374_52666496_52671629_52671704_52671794_52671872_52678433_52678473_52682324_52682409_52683787_52683908_52695367
transcript_58248.known	chr14	+	2163	14	FSM	ENSG00000100519.12	ENST00000445930.7	2163	14	0	0	0	0	multi-exon	FALSE	canonical	3	955	junction_4	72.3017182474833	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAAAGGAATCATCATTGG	52693083	True	NA	NA	False	AATAAA	-16	NA	52707199	52728590	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_52707305_52708308_52708389_52708482_52708523_52708763_52708817_52711100_52711169_52711409_52711525_52713880_52713969_52718080_52718143_52718228_52718353_52718976_52719039_52720860_52720982_52721109_52721191_52723964_52724037_52727498
transcript_58256.known	chr14	+	1590	14	FSM	ENSG00000100519.12	ENST00000612399.4	1590	14	0	0	0	0	multi-exon	FALSE	canonical	3	955	junction_4	72.3017182474833	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATATTCTTGTCTTTTCTG	52693061	True	NA	13	True	AATAAA	-27	NA	52707177	52727995	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_52707305_52708308_52708389_52708482_52708523_52708763_52708817_52711100_52711169_52711409_52711525_52713880_52713969_52718080_52718143_52718228_52718353_52718976_52719039_52720860_52720982_52721109_52721191_52723964_52724037_52727498
transcript_58261.known	chr14	+	4554	12	FSM	ENSG00000198252.12	ENST00000442123.6	4554	12	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	119.573691791276	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATTGGTGGTTGTATTA	52722123	True	NA	4	True	ATTAAA	-11	NA	52730179	52774941	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_52730211_52730458_52730532_52744851_52744885_52746425_52746480_52750682_52750781_52756550_52756612_52757318_52757356_52757742_52757783_52757873_52757925_52759681_52759755_52768839_52768934_52771032
transcript_58263.known	chr14	+	4864	11	FSM	ENSG00000198252.12	ENST00000354586.5	4864	11	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_5	32.3061913570758	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGAAAAGCTCATTCATA	52722109	True	NA	31	True	ATTAAA	-27	NA	52730165	52774989	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_52730532_52744851_52744885_52746425_52746480_52750682_52750781_52756550_52756612_52757318_52757356_52757742_52757783_52757873_52757925_52759681_52759755_52768839_52768934_52771032
transcript_58279.nnic	chr14	-	3014	7	NNC	ENSG00000100522.10	novel	3867	6	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	136.542626636845	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTGCCTGGACTACAGAC	NA	False	NA	-23	True	AATAAA	-18	NA	52791702	52775192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_-_52775911_52776858_52778459_52780678_52780741_52781783_52781912_52783422_52783486_52784496_52784665_52791427
transcript_58280.nnic	chr14	-	2361	7	NNC	ENSG00000100522.10	novel	3867	6	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	136.542626636845	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTGCCTGGACTACAGAC	NA	False	NA	-23	True	AATAAA	-18	NA	52791702	52775192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_-_52775942_52777542_52778459_52780678_52780741_52781783_52781912_52783422_52783486_52784496_52784665_52791427
transcript_58281.nnic	chr14	-	3078	7	NNC	ENSG00000100522.10	novel	3867	6	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	136.542626636845	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTGCCTGGACTACAGAC	NA	False	NA	-23	True	AATAAA	-18	NA	52791702	52775192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_-_52775947_52776830_52778459_52780678_52780741_52781783_52781912_52783422_52783486_52784496_52784665_52791427
transcript_58282.nic	chr14	-	3041	7	NIC	ENSG00000100522.10	novel	2317	7	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	136.542626636845	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTGCCTGGACTACAGAC	NA	False	NA	-23	True	AATAAA	-18	NA	52791702	52775192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_52775947_52776867_52778459_52780678_52780741_52781783_52781912_52783422_52783486_52784496_52784665_52791427
transcript_58286.known	chr14	-	785	7	FSM	ENSG00000100522.10	ENST00000557604.1	785	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	166.880862360614	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATAAAAAGTTTGGATATA	-52791285	False	NA	NA	False	NA	NA	NA	52791668	52778374	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_52778459_52780678_52780741_52781783_52781912_52783422_52783486_52784496_52784665_52787832_52787872_52791427
transcript_58291.known	chr14	-	3867	6	FSM	ENSG00000100522.10	ENST00000216410.8	3867	6	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_1	23.0651251893416	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTGCCTGGACTACAGAC	-52786092	True	NA	-23	True	AATAAA	-18	NA	52791607	52775192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_52778459_52780678_52780741_52781783_52781912_52783422_52783486_52784496_52784665_52791427
transcript_583.known	chr1	-	2114	17	FSM	ENSG00000127054.22	ENST00000435064.6	2114	17	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_10	44.9576189316116	1435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTGGTACTCTCTTCTT	-1318737	True	NA	-17	True	AGTAAA	-15	NA	1324660	1311599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1311925_1312017_1312148_1312225_1312369_1312439_1312502_1312592_1312701_1312786_1312950_1313034_1313125_1313508_1313593_1313731_1313922_1314300_1314366_1314823_1314963_1315403_1315439_1315519_1315619_1319295_1319525_1320455_1320530_1320995_1321094_1324580
transcript_58301.known	chr14	-	3247	16	FSM	ENSG00000073712.15	ENST00000343279.8	3247	16	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_13	34.321745617352	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTATTTTTGTACTTG	-52950960	False	NA	-8	True	AATAAA	-17	NA	52950992	52857274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_52858551_52859572_52859715_52860340_52860466_52861013_52861035_52864400_52864623_52864746_52864854_52872798_52872924_52874176_52874227_52875222_52875358_52878581_52878690_52881035_52881139_52881243_52881470_52893292_52893428_52919122_52919357_52950411_52950578_52950920
transcript_58303.known	chr14	-	3286	15	FSM	ENSG00000073712.15	ENST00000341590.8	3286	15	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	91.0782630488746	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATTTTTGTACTTGTT	-52946345	True	NA	-6	True	AATAAA	-19	NA	52951050	52857272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_52858551_52859572_52859715_52860340_52860466_52864400_52864623_52864746_52864854_52872798_52872924_52874176_52874227_52875222_52875358_52878581_52878690_52881035_52881139_52881243_52881470_52893292_52893428_52919122_52919357_52950411_52950578_52950920
transcript_58309.nic	chr14	-	887	4	ISM	ENSG00000073712.15	ENST00000399304.7	2082	15	-320	33871	-288	0	5prime_fragment	FALSE	canonical	3	317	junction_1	31.0268700752536	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTAGATGACCAGTCTGAA	-52951306	False	NA	NA	False	AAAAAG	-5	NA	52951338	52893358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_52893428_52919122_52919357_52950411_52950578_52950920
transcript_58311.nic	chr14	-	472	2	ISM	ENSG00000073712.15	ENST00000399304.7	2082	15	-208	90924	-176	-57036	5prime_fragment	FALSE	canonical	3	355	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAGCATCCCAGCCGC	-52951194	False	NA	NA	False	NA	NA	NA	52951226	52950411	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_52950578_52950920
transcript_58312.known	chr14	-	12769	13	FSM	ENSG00000100523.16	ENST00000395606.5	12769	13	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_10	23.6130554754968	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTGCACTGGTTTCAT	-53151142	True	NA	NA	False	ATTAAA	-25	NA	53153204	53036744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_53046950_53054437_53054630_53055659_53055913_53058476_53058627_53061125_53061202_53062942_53063206_53072596_53072704_53073740_53073848_53091784_53091933_53093315_53093445_53103030_53103052_53103682_53103857_53152260
transcript_58313.known	chr14	-	5603	12	FSM	ENSG00000100523.16	ENST00000357758.3	5603	12	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	16.4944268073334	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTGTACATGCTATGA	-53151220	True	NA	-1	True	ATTAAA	-13	NA	53153282	53043967	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_53046950_53054437_53054630_53055659_53055913_53058476_53058627_53061125_53061202_53062942_53063206_53072596_53072704_53073740_53073848_53091784_53091933_53093315_53093445_53103682_53103857_53152260
transcript_58322.known	chr14	-	1931	4	FSM	ENSG00000125378.16	ENST00000245451.9	1931	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	7.03957069398096	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGATTTTTTTTTTCTCC	-53956273	True	NA	3	True	AATAAA	-25	NA	53956825	53949735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_53950889_53951852_53952230_53953275_53953401_53956549
transcript_58323.known	chr14	-	1708	4	FSM	ENSG00000125378.16	ENST00000559087.5	1708	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	14.1656862405839	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGATTTTTTTTTTCTCC	-53956259	True	NA	3	True	AATAAA	-25	NA	53956811	53949735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_53950889_53951852_53952230_53953275_53953401_53956758
transcript_58329.known	chr14	-	1705	3	FSM	ENSG00000125378.16	ENST00000558984.1	1705	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	5.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATCATGATTTTTTTTT	-53952903	False	552	-2	True	AATAAA	-20	NA	53953455	53949740	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_53950889_53951852_53952230_53953275
transcript_58330.known	chr14	+	938	9	FSM	ENSG00000100526.21	ENST00000556102.6	938	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_8	528.558402047494	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTGTGTCTCTTTCATT	54386057	True	NA	16	True	NA	NA	NA	54397002	54420218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_54397078_54399893_54399977_54401523_54401580_54408744_54408790_54411483_54411707_54415898_54415931_54417847_54417952_54418213_54418307_54419991
transcript_58331.known	chr14	+	841	8	FSM	ENSG00000100526.21	ENST00000335183.11	841	8	0	0	0	0	multi-exon	FALSE	canonical	3	1166	junction_1	68.4621152498942	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTGTGTCTCTTTCATT	54386061	True	NA	16	True	NA	NA	NA	54397006	54420218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_54397078_54399893_54399977_54401523_54401580_54408744_54408790_54411483_54411707_54415898_54415931_54417847_54417952_54419991
transcript_58333.known	chr14	+	727	7	FSM	ENSG00000100526.21	ENST00000442975.6	727	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	447.846699961791	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAACTCGTTGTGTCTCT	54386049	True	NA	10	True	NA	NA	NA	54396994	54420212	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_54397078_54399893_54399913_54408744_54408790_54411483_54411707_54415898_54415931_54417847_54417952_54419991
transcript_58334.nic	chr14	+	805	7	NIC	ENSG00000100526.21	novel	841	8	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	147	junction_1	420.430500267946	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTGTGTCTCTTTCATT	54386014	True	NA	16	True	NA	NA	NA	54396959	54420218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_54397078_54401523_54401580_54408744_54408790_54411483_54411707_54415898_54415931_54417847_54417952_54419991
transcript_58335.known	chr14	+	1070	6	FSM	ENSG00000100526.21	ENST00000541304.5	1070	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	508.741427446203	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTCAGCATGTCTTTTG	54386083	True	NA	NA	False	NA	NA	NA	54397028	54414219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_54397078_54399893_54399977_54401523_54401580_54408744_54408790_54411483_54411707_54413605
transcript_58338.known	chr14	+	689	6	FSM	ENSG00000100526.21	ENST00000555837.5	689	6	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	455.286898559579	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGAGGTGGGCGGTGCT	NA	False	NA	NA	False	AATACA	-11	NA	54396848	54417951	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_54397078_54401523_54401580_54408744_54408790_54411483_54411707_54415898_54415931_54417847
transcript_58339.known	chr14	-	787	6	FSM	ENSG00000100528.12	ENST00000554683.1	787	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	368.336042222316	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTAATATAAAATGATTA	-54433938	True	NA	NA	False	GATAAA	-23	NA	54441344	54427594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_54427842_54430260_54430405_54432107_54432221_54436368_54436438_54436669_54436786_54441246
transcript_58340.known	chr14	-	4735	5	FSM	ENSG00000100528.12	ENST00000216416.9	4735	5	0	0	0	0	multi-exon	FALSE	canonical	3	660	junction_1	66.7359535782624	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTGTAGTTTATGCAT	-54433968	True	NA	-2	True	AATAAA	-17	NA	54441374	54423560	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_54427842_54430260_54430405_54432107_54432221_54436368_54436438_54441246
transcript_58341.known	chr14	-	1233	4	FSM	ENSG00000100528.12	ENST00000395573.8	1233	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	381.210644598961	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTCACTTTCAGTGCAT	-54433985	True	NA	-10	True	AATAAA	-12	NA	54441391	54426935	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_54427842_54432107_54432221_54436368_54436438_54441246
transcript_58342.known	chr14	-	856	4	FSM	ENSG00000100528.12	ENST00000557659.5	856	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	339.405689731658	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGATGATTATATATGGATA	-54433970	True	NA	-67	True	NA	NA	NA	54441376	54427328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_54427842_54430260_54430405_54436368_54436438_54441246
transcript_58344.known	chr14	-	4125	7	FSM	ENSG00000197045.13	ENST00000616146.4	4125	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	330.653771589962	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGACTTCCAGCTTTTCT	-54480349	True	NA	-26	True	AATAAA	-12	NA	54489026	54474490	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_54478160_54479785_54479860_54480873_54480956_54481407_54481459_54482152_54482203_54483670_54483768_54488924
transcript_58354.known	chr14	+	1962	6	FSM	ENSG00000100532.13	ENST00000216420.12	1962	6	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_3	20.4978047605103	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTTATTCATCCATTGT	54508490	True	NA	16	True	AATAAA	-25	NA	54509905	54539292	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_54510064_54522453_54522594_54530048_54530227_54530902_54531051_54537721_54537830_54538062
transcript_58357.known	chr14	+	1827	6	FSM	ENSG00000100532.13	ENST00000556216.5	1827	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	83.2163445484119	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGAGTTTGGCCTTTTA	54508486	True	NA	23	True	CATAAA	-25	NA	54509901	54538616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_54510064_54522453_54522594_54530048_54530764_54530902_54531051_54537721_54537830_54538062
transcript_58358.known	chr14	+	901	6	FSM	ENSG00000100532.13	ENST00000557512.5	901	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	99.2725541124031	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAGACACACATGCCTGT	54508710	False	NA	NA	False	NA	NA	NA	54510125	54538247	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_54510268_54522453_54522594_54530048_54530227_54530902_54531051_54537721_54537830_54538062
transcript_58361.known	chr14	+	622	5	FSM	ENSG00000100532.13	ENST00000557755.5	622	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	105.650366776458	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAACAATTCCTCTTCAGA	54508496	True	NA	NA	False	NA	NA	NA	54509911	54538098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_54510064_54530048_54530227_54530902_54531051_54537721_54537830_54538062
transcript_58363.known	chr14	+	719	4	FSM	ENSG00000100532.13	ENST00000554791.5	719	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	114.499878699596	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATTTTCAGCAGTGCCC	54509797	False	NA	NA	False	NA	NA	NA	54509811	54538281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_54510064_54522453_54522594_54537721_54537830_54538062
transcript_58371.known	chr14	-	2916	6	FSM	ENSG00000131979.20	ENST00000491895.7	2916	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	4.48998886412873	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGTGAAAGTTGTTTC	-54902486	True	NA	-9	True	ATTAAA	-14	NA	54902826	54842016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_54844144_54845767_54845853_54847098_54847131_54859680_54859737_54865326_54865437_54902320
transcript_58372.known	chr14	-	1977	7	FSM	ENSG00000131979.20	ENST00000395514.5	1977	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13.3884278389959	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTGTTTCTTTTTCAAC	-54902484	True	NA	0	True	ATTAAA	-23	NA	54902824	54842007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_54843055_54844000_54844144_54845767_54845853_54847098_54847131_54859680_54859737_54865326_54865437_54902320
transcript_58374.known	chr14	-	6019	26	FSM	ENSG00000198554.12	ENST00000360586.8	6019	26	0	0	0	0	multi-exon	FALSE	canonical	1	126	junction_11	55.1433912631423	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACAATGCCATAATTACTC	-55020123	True	NA	NA	False	AATAAA	-18	NA	55027099	54938948	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_54941691_54944331_54944471_54955560_54955695_54957033_54957205_54957591_54957636_54962497_54962552_54962737_54962854_54962951_54963173_54966474_54966607_54967279_54967395_54981539_54981697_54984722_54984861_54987145_54987388_54989027_54989213_54991212_54991401_54995602_54995814_55000502_55000645_55000885_55000993_55002092_55002186_55007279_55007376_55008315_55008367_55008607_55008720_55010308_55010461_55013484_55013597_55026710_55026804_55027027
transcript_58382.known	chr14	-	3722	25	FSM	ENSG00000198554.12	ENST00000420358.2	3722	25	0	0	0	0	multi-exon	FALSE	canonical	1	58	junction_24	77.8272660019182	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTTCTAGGGGTTTGGT	-55020129	True	NA	-9	True	ATTAAA	-29	NA	55027105	54941158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_54941691_54944331_54944471_54955560_54955695_54957033_54957205_54957591_54957636_54962497_54962552_54962737_54962854_54962951_54963173_54966474_54966607_54967279_54967395_54981539_54981697_54984722_54984861_54987145_54987388_54989027_54989213_54991212_54991401_54995602_54995814_55000502_55000645_55000885_55000993_55002092_55002186_55007279_55007376_55008315_55008367_55008607_55008720_55010308_55010461_55013484_55013597_55027027
transcript_58390.nic	chr14	-	3036	24	ISM	ENSG00000198554.12	ENST00000360586.8	6019	26	0	16714	0	-14392	5prime_fragment	FALSE	canonical	1	126	junction_9	53.6922547772244	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTCAAACTAATAAAACTG	-55020123	True	NA	NA	False	AAGAAA	-1	NA	55027099	54955662	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_54955695_54957033_54957205_54957591_54957636_54962497_54962552_54962737_54962854_54962951_54963173_54966474_54966607_54967279_54967395_54981539_54981697_54984722_54984861_54987145_54987388_54989027_54989213_54991212_54991401_54995602_54995814_55000502_55000645_55000885_55000993_55002092_55002186_55007279_55007376_55008315_55008367_55008607_55008720_55010308_55010461_55013484_55013597_55026710_55026804_55027027
transcript_58401.nic	chr14	-	2578	19	ISM	ENSG00000198554.12	ENST00000360586.8	6019	26	-6	24050	0	-21728	5prime_fragment	FALSE	canonical	1	126	junction_4	51.3980172072766	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGGAAGAAGAAGAAGA	-55020129	True	NA	-4	True	NA	NA	NA	55027105	54962998	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_54963173_54966474_54966607_54967279_54967395_54981539_54981697_54984722_54984861_54987145_54987388_54989027_54989213_54991212_54991401_54995602_54995814_55000502_55000645_55000885_55000993_55002092_55002186_55007279_55007376_55008315_55008367_55008607_55008720_55010308_55010461_55013484_55013597_55026710_55026804_55027027
transcript_58413.known	chr14	+	6903	3	FSM	ENSG00000180008.9	ENST00000555846.2	6903	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	1.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTTGTGTTTTATTTTAA	55024201	True	NA	15	True	ATTAAA	-22	NA	55027235	55049489	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_55027472_55031862_55031992_55042951
transcript_58420.known	chr14	+	6779	2	FSM	ENSG00000180008.9	ENST00000395472.2	6779	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTTGTGTTTTATTTTA	55024195	True	NA	14	True	ATTAAA	-21	NA	55027229	55049488	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_55027472_55042951
transcript_58432.known	chr14	+	6466	4	FSM	ENSG00000168175.15	ENST00000395468.9	6466	4	0	0	0	0	multi-exon	FALSE	canonical	3	855	junction_1	96.858430482615	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGTTTCTTTTTTTCCTG	55038208	True	NA	NA	False	NA	NA	NA	55051646	55070194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_55051804_55061679_55061702_55062617_55063326_55064615
transcript_58440.known	chr14	+	958	6	FSM	ENSG00000131981.16	ENST00000254301.14	958	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	11.0163514831363	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTCATTTAATTGGAGTG	55128418	True	NA	17	True	AATAAA	-26	NA	55129251	55145423	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_55129301_55137369_55137392_55138044_55138369_55140274_55140364_55142583_55142750_55145115
transcript_58446.known	chr14	-	2954	20	FSM	ENSG00000126787.13	ENST00000395425.6	2954	20	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_1	317.562409073413	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGCTTAAGGCTAAGTA	-55171041	True	NA	14	True	AATAAA	-36	NA	55191544	55148111	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_55148474_55148593_55148685_55150798_55150849_55151694_55151942_55152589_55152648_55154616_55154807_55158521_55158742_55162970_55163076_55169398_55169560_55170701_55170788_55175345_55175473_55175893_55176019_55177061_55177337_55179628_55179700_55180655_55180779_55181212_55181298_55182369_55182433_55183559_55183754_55188941_55189181_55191462
transcript_58463.known	chr14	-	2881	19	FSM	ENSG00000126787.13	ENST00000247191.7	2881	19	0	0	0	0	multi-exon	FALSE	canonical	3	917	junction_6	125.45162857098	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCCTCTCTTGTTTAAA	-55171082	True	NA	-9	True	AATAAA	-13	NA	55191585	55148134	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_55148474_55150798_55150849_55151694_55151942_55152589_55152648_55154616_55154807_55158521_55158742_55162970_55163076_55169398_55169560_55170701_55170788_55175345_55175473_55175893_55176019_55177061_55177337_55179628_55179700_55180655_55180779_55181212_55181298_55182369_55182433_55183559_55183754_55188941_55189181_55191462
transcript_58480.nic	chr14	-	2363	17	ISM	ENSG00000126787.13	ENST00000247191.7	2881	19	-13	3702	10	-1509	5prime_fragment	FALSE	canonical	3	917	junction_4	114.275964637145	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGAATTTCAGATGTTGT	-55171095	True	NA	NA	False	NA	NA	NA	55191598	55151836	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_55151942_55152589_55152648_55154616_55154807_55158521_55158742_55162970_55163076_55169398_55169560_55170701_55170788_55175345_55175473_55175893_55176019_55177061_55177337_55179628_55179700_55180655_55180779_55181212_55181298_55182369_55182433_55183559_55183754_55188941_55189181_55191462
transcript_58493.nic	chr14	-	772	5	ISM	ENSG00000126787.13	ENST00000247191.7	2881	19	-69	33079	-46	-558	5prime_fragment	FALSE	canonical	3	1162	junction_3	52.7494075796117	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAGGAATATTAGCAATTA	-55191644	False	NA	NA	False	AAGAAA	-22	NA	55191654	55181213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_55181298_55182369_55182433_55183559_55183754_55188941_55189181_55191462
transcript_58495.nic	chr14	-	431	3	ISM	ENSG00000126787.13	ENST00000247191.7	2881	19	-5	35555	-5	-84	5prime_fragment	FALSE	canonical	3	1162	junction_1	69	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAACTTCAAAAATTGAAAG	-55171087	True	NA	NA	False	AATACA	-11	NA	55191590	55183689	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_55183754_55188941_55189181_55191462
transcript_58498.nnic	chr14	-	3685	11	NNC	ENSG00000126775.9	novel	4715	10	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.1591556493098	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTGCTCATGTGTATGT	-55408163	True	NA	-2	True	AATAAA	-12	NA	55411848	55366392	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_-_55367476_55368521_55369926_55377818_55377905_55377983_55378075_55380572_55380691_55381961_55382192_55385858_55386097_55390910_55390993_55395939_55395983_55397371_55397435_55411601
transcript_58499.known	chr14	-	4715	10	FSM	ENSG00000126775.9	ENST00000247178.6	4715	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	8.2192186706253	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTCATGTGTATGTCT	-55408145	True	NA	0	True	AATAAA	-14	NA	55411830	55366390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_55369926_55377818_55377905_55377983_55378075_55380572_55380691_55381961_55382192_55385858_55386097_55390910_55390993_55395939_55395983_55397371_55397435_55411601
transcript_58500.nic	chr14	-	418	4	ISM	ENSG00000126775.9	ENST00000247178.6	4715	10	-18	24537	-18	-24536	5prime_fragment	FALSE	canonical	3	26	junction_1	7.78888096369861	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAGAAATGGAGAAAAGTA	-55408163	True	NA	NA	False	AAAACA	-19	NA	55411848	55390927	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_55390993_55395939_55395983_55397371_55397435_55411601
transcript_58501.known	chr14	+	3515	3	FSM	ENSG00000178974.11	ENST00000681904.1	3515	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTTAAATGGAACCCAAGT	55269622	True	NA	-2	True	AATAAA	-8	NA	55271369	55353598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_55271538_55332816_55332946_55350380
transcript_58502.known	chr14	+	3348	2	FSM	ENSG00000178974.11	ENST00000313833.5	3348	2	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGTTTTGCAAAGATTT	55269673	True	NA	11	True	AATAAA	-21	NA	55271420	55353611	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_55271538_55350380
transcript_58505.known	chr14	+	577	2	FSM	ENSG00000178974.11	ENST00000554940.1	577	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCCAAGGTACAGGTGGA	55269675	True	NA	NA	False	NA	NA	NA	55271422	55350864	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_55271538_55350402
transcript_58508.known	chr14	+	4728	44	FSM	ENSG00000126777.18	ENST00000395314.8	4728	44	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_39	181.007115846367	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGACTTGTTCTAATTTTT	55566300	True	NA	19	True	AATAAA	-20	NA	55580206	55684579	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_55580355_55612018_55612572_55616516_55616655_55617963_55618135_55619181_55619313_55627911_55628029_55629956_55630098_55633234_55633342_55634525_55634659_55636448_55636537_55637197_55637365_55637778_55637848_55639184_55639223_55639912_55640004_55640373_55640443_55640932_55640971_55641126_55641209_55641691_55641761_55646972_55647008_55648024_55648116_55648801_55648871_55649775_55649814_55650327_55650419_55650568_55650638_55651889_55651928_55652849_55652941_55653016_55653086_55653558_55653597_55656041_55656133_55658545_55658615_55659665_55659704_55661521_55661613_55663954_55664042_55667240_55667331_55670728_55670810_55671565_55671656_55671784_55671878_55672629_55672702_55672928_55673013_55673171_55673256_55675834_55675919_55678351_55678445_55679564_55679686_55684098
transcript_58513.known	chr14	+	4449	42	FSM	ENSG00000126777.18	ENST00000438792.6	4449	42	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_32	140.091238222702	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGACTTGTTCTAATTTTT	55566408	True	NA	19	True	AATAAA	-20	NA	55580314	55684579	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_55580355_55612018_55612572_55616516_55616655_55617963_55618135_55619181_55619313_55627911_55628029_55629956_55630098_55633234_55633342_55634525_55634659_55636448_55636537_55637197_55637365_55637778_55637848_55639184_55639223_55639912_55640004_55640373_55640443_55640932_55640971_55641126_55641209_55641691_55641761_55646972_55647008_55648024_55648116_55648801_55648871_55649775_55649814_55650327_55650419_55650568_55650638_55651889_55651928_55652849_55652941_55653016_55653086_55653558_55653597_55656041_55656133_55658545_55658615_55659665_55659704_55661521_55661613_55667240_55667331_55670728_55670810_55671565_55671656_55671784_55671878_55672629_55672702_55672928_55673013_55675834_55675919_55678351_55678445_55679564_55679686_55684098
transcript_58523.nic	chr14	+	3033	28	ISM	ENSG00000126777.18	ENST00000395314.8	4728	44	-52	30981	-52	723	5prime_fragment	FALSE	canonical	3	609	junction_1	69.3978411526825	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTATGCTTTAAGACCACA	55580141	False	NA	NA	False	NA	NA	NA	55580154	55653598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_55580355_55612018_55612572_55616516_55616655_55617963_55618135_55619181_55619313_55627911_55628029_55629956_55630098_55633234_55633342_55634525_55634659_55636448_55636537_55637197_55637365_55637778_55637848_55639184_55639223_55639912_55640004_55640373_55640443_55640932_55640971_55641126_55641209_55641691_55641761_55646972_55647008_55648024_55648116_55648801_55648871_55649775_55649814_55650327_55650419_55650568_55650638_55651889_55651928_55652849_55652941_55653016_55653086_55653558
transcript_58529.nic	chr14	+	2350	18	ISM	ENSG00000126777.18	ENST00000395314.8	4728	44	0	42819	0	4419	5prime_fragment	FALSE	canonical	3	609	junction_1	66.8729105032041	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGCTTTTCCTAAATTA	55566300	True	NA	NA	False	ATTAAA	-41	NA	55580206	55641760	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_55580355_55612018_55612572_55616516_55616655_55617963_55618135_55619181_55619313_55627911_55628029_55629956_55630098_55633234_55633342_55634525_55634659_55636448_55636537_55637197_55637365_55637778_55637848_55639184_55639223_55639912_55640004_55640373_55640443_55640932_55640971_55641126_55641209_55641691
transcript_58535.nic	chr14	+	1301	7	ISM	ENSG00000126777.18	ENST00000395314.8	4728	44	-21	54601	-21	-7363	5prime_fragment	FALSE	canonical	3	609	junction_1	56.3165655518477	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCAATGTGGTTATAACA	55566279	True	NA	NA	False	AAGAAA	-1	NA	55580185	55629978	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_55580355_55612018_55612572_55616516_55616655_55617963_55618135_55619181_55619313_55627911_55628029_55629956
transcript_58541.nic	chr14	+	506	3	ISM	ENSG00000126777.18	ENST00000395308.5	4134	43	-122	68471	-5	17	5prime_fragment	FALSE	canonical	3	113	junction_2	10	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGAATGGAAACCTCCAT	55566295	True	NA	NA	False	AATAAA	-11	NA	55580201	55612247	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_55580355_55601756_55601881_55612018
transcript_58542.nic	chr14	+	672	3	ISM	ENSG00000126777.18	ENST00000395308.5	4134	43	-122	68305	-5	140	5prime_fragment	FALSE	canonical	3	113	junction_2	10	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGCTTGAAGAGCAGG	55566295	True	NA	NA	False	AAAAAG	-18	NA	55580201	55612413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_55580355_55601756_55601881_55612018
transcript_58545.nic	chr14	+	716	2	ISM	ENSG00000126777.18	ENST00000395314.8	4728	44	-339	72332	-339	17	5prime_fragment	FALSE	canonical	3	609	junction_1	0	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGAATGGAAACCTCCAT	NA	False	NA	NA	False	AATAAA	-11	NA	55579867	55612247	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_55580355_55612018
transcript_58546.nic	chr14	+	779	2	ISM	ENSG00000126777.18	ENST00000395314.8	4728	44	-236	72166	-236	140	5prime_fragment	FALSE	canonical	3	609	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGCTTGAAGAGCAGG	55579957	True	NA	NA	False	AAAAAG	-18	NA	55579970	55612413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_55580355_55612018
transcript_58547.known	chr14	-	1465	3	FSM	ENSG00000186615.12	ENST00000335142.6	1534	3	69	0	22	0	multi-exon	FALSE	canonical	3	21	junction_1	2	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACTATTAAAATGTGAAT	-55579485	True	NA	-36	True	NA	NA	NA	55580074	55576185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_55577380_55578605_55578738_55579935
transcript_58550.known	chr14	-	415	3	FSM	ENSG00000186615.12	ENST00000663686.1	415	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	7.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGCCACTCATTGCGTG	-55580848	True	NA	-10	True	ATTAAA	-14	NA	55580888	55577139	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_55577380_55578605_55578738_55580845
transcript_58553.known	chr14	+	5871	6	FSM	ENSG00000139946.10	ENST00000267460.9	5871	6	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	5.54977477020464	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACTATTTCTCGTGACA	56117088	True	NA	-48	True	ATTAAA	-20	NA	56118410	56301524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_56118738_56178334_56178465_56279675_56279778_56288436_56288635_56290267_56290457_56296599
transcript_58560.known	chr14	+	4259	16	FSM	ENSG00000070269.14	ENST00000261556.11	4259	16	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_8	12.9587379358057	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGTCTTTATTGGTTCA	56578677	True	NA	14	True	AATAAA	-22	NA	56579797	56649515	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_56580075_56585000_56585033_56585760_56585913_56603814_56603993_56605569_56605684_56609105_56609286_56612244_56612286_56615943_56616028_56617182_56617298_56618593_56618764_56621530_56621703_56625381_56625531_56632994_56633172_56634898_56634953_56636507_56636599_56647242
transcript_58582.known	chr14	+	2572	7	FSM	ENSG00000070269.14	ENST00000557657.5	2572	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	7.67390962214756	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTGAGATGGCGT	56578704	True	NA	NA	False	NA	NA	NA	56579824	56613910	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_56580075_56585000_56585033_56585760_56585913_56603814_56603993_56605569_56605684_56609105_56609286_56612244
transcript_58586.known	chr14	-	2956	5	FSM	ENSG00000165588.19	ENST00000339475.10	2956	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	120.553670620185	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTCTGGCTATTTC	-56810424	False	NA	-1	True	AATGAA	-19	NA	56810448	56799904	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_56802356_56804187_56804340_56805359_56805576_56810158_56810223_56810375
transcript_58587.known	chr14	-	3011	5	FSM	ENSG00000165588.19	ENST00000672264.2	3011	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	105.396869023705	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTCTGGCTATTTC	-56810400	True	NA	-1	True	AATGAA	-19	NA	56810479	56799904	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_56802356_56804187_56804364_56805359_56805576_56810158_56810223_56810375
transcript_58591.known	chr14	-	2109	3	FSM	ENSG00000165588.19	ENST00000408990.8	2109	3	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_2	12	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGGTCCAGTTTAATTT	-56801033	True	NA	-1	True	ATTAAA	-16	NA	56805667	56800706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_56802356_56804187_56804340_56805359
transcript_58592.known	chr14	-	908	3	FSM	ENSG00000165588.19	ENST00000554845.2	1086	3	0	178	0	-103	multi-exon	FALSE	canonical	3	35	junction_2	109.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATCAGTCCCCAGCTTCTC	-56801014	True	NA	NA	False	NA	NA	NA	56805648	56801912	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_56802356_56804187_56804364_56805359
transcript_58595.known	chr14	-	835	2	FSM	ENSG00000165588.19	ENST00000554788.5	835	2	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAGCTTAACTTCAATGC	-56801014	True	NA	NA	False	NA	NA	NA	56805648	56801809	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_56802356_56805359
transcript_58599.known	chr14	-	10486	18	FSM	ENSG00000070367.16	ENST00000621441.5	10486	18	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_13	42.9213491695318	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATACAATTGTTGTTTTTG	-57257617	True	NA	-6	True	AATAAA	-18	NA	57268905	57200506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_57208798_57209566_57209783_57209952_57210062_57217981_57218069_57219321_57219443_57222307_57222417_57229733_57229882_57231505_57231716_57232666_57232750_57233742_57233884_57233987_57234033_57235710_57235821_57237337_57237367_57239594_57239660_57244164_57244360_57246710_57246859_57247617_57247713_57268621
transcript_58601.known	chr14	-	2349	18	FSM	ENSG00000070367.16	ENST00000555148.5	2349	18	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_16	107.779988641478	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTCGGTTGATAGAAAGCA	-57257549	True	NA	NA	False	NA	NA	NA	57268837	57208544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_57208798_57209566_57209783_57209952_57210062_57217981_57218069_57219321_57219443_57222307_57222417_57229733_57229882_57231505_57231716_57232666_57232750_57233742_57233884_57233987_57234033_57235710_57235821_57237337_57237367_57239594_57239660_57244164_57244360_57246710_57246828_57247617_57247713_57268621
transcript_58606.nic	chr14	-	1912	15	ISM	ENSG00000070367.16	ENST00000621441.5	10486	18	-85	17518	-85	-9480	5prime_fragment	FALSE	canonical	3	349	junction_10	41.8444641938867	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTGAACAAATGGAGATG	NA	False	NA	NA	False	AAAAAG	-4	NA	57268990	57218024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_57218069_57219321_57219443_57222307_57222417_57229733_57229882_57231505_57231716_57232666_57232750_57233742_57233884_57233987_57234033_57235710_57235821_57237337_57237367_57239594_57239660_57244164_57244360_57246710_57246859_57247617_57247713_57268621
transcript_58610.known	chr14	-	594	4	FSM	ENSG00000070367.16	ENST00000555749.5	594	4	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_2	39.1265752256556	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATGAGCTGCAATAATT	-57257437	False	NA	NA	False	GATAAA	-31	NA	57268725	57244112	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_57244360_57246710_57246859_57247617_57247713_57268621
transcript_58611.known	chr14	-	772	5	FSM	ENSG00000070367.16	ENST00000554598.5	772	5	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_3	40.0562105047395	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTATGATTTTCTTTGCC	-57257535	True	NA	NA	False	AATAAA	-13	NA	57268823	57239527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_57239660_57244164_57244360_57246710_57246859_57247617_57247713_57268621
transcript_58617.nnic	chr14	+	3336	8	NNC	ENSG00000053770.12	novel	11675	8	NA	NA	-359	-5	intron_retention	FALSE	canonical	3	26	junction_2	82.3994749339324	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTATATCTTGGGTTC	57268552	False	NA	NA	False	ATTAAA	-14	NA	57268564	57290069	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_+_57269389_57274243_57274818_57280194_57280423_57282088_57282229_57282933_57283020_57283111_57283231_57286222_57286320_57288801
transcript_58618.known	chr14	+	11675	8	FSM	ENSG00000053770.12	ENST00000261558.8	11675	8	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_2	21.2458879574858	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGTGTAAGTGTTTTATA	57265507	True	NA	5	True	AATAAA	-17	NA	57268970	57298742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_57269389_57274243_57274890_57280194_57280423_57282088_57282229_57282933_57283020_57283111_57283231_57286222_57286320_57288801
transcript_58622.known	chr14	+	1691	2	FSM	ENSG00000053770.12	ENST00000554931.1	1691	2	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGGAGAGAGACAGGC	57265460	True	NA	41	True	NA	NA	NA	57268923	57275469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_57269389_57274243
transcript_58627.known	chr14	+	7600	5	FSM	ENSG00000139977.14	ENST00000556492.6	7600	5	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	11.8638105177047	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGACTTAACTAGGTAAA	57386251	True	NA	13	True	AATAAA	-24	NA	57390585	57415906	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_57390706_57390956_57391729_57396751_57396876_57399827_57399884_57409378
transcript_58635.nic	chr14	+	3300	2	ISM	ENSG00000139977.14	ENST00000556492.6	7600	5	-8	21778	-8	-15803	5prime_fragment	FALSE	canonical	3	168	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACAAATGTGAGACACTTT	57386243	True	NA	NA	False	NA	NA	NA	57390577	57394128	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_57390706_57390956
transcript_58636.known	chr14	-	6495	8	FSM	ENSG00000139971.15	ENST00000267485.7	6495	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	11.771636613973	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTGGGCCTGGTAGCGC	-58151100	True	NA	NA	False	AATACA	-6	NA	58152213	58000760	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_58004805_58005047_58005183_58012118_58012151_58096723_58096982_58131511_58131722_58133089_58133342_58137989_58139415_58152074
transcript_58640.known	chr14	-	2380	5	FSM	ENSG00000139971.15	ENST00000334342.5	2380	5	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	18.6949190958399	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAGGAGAGAACTGAATAA	-58151070	True	NA	NA	False	AAAAAG	-21	NA	58152183	58116123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_58116508_58131511_58131722_58133089_58133342_58137989_58139415_58152074
transcript_58642.nnic	chr14	-	1070	4	NNC	ENSG00000139971.15	novel	6495	8	NA	NA	-29011	-3293	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	16.9901932498329	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACGTTTGCTGTCTTAAA	NA	False	NA	-3	True	ATTAAA	-18	NA	58033035	58004053	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_-_58004805_58005047_58005183_58012118_58012151_58032883
transcript_58644.nic	chr14	-	2339	4	ISM	ENSG00000139971.15	ENST00000334342.5	2380	5	-38	15083	-8	0	5prime_fragment	FALSE	canonical	3	54	junction_3	3.29983164553722	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAATTCATTTTCATATG	-58151108	True	NA	-9	True	AATAAA	-21	NA	58152221	58131206	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_58131722_58133089_58133342_58137989_58139415_58152074
transcript_58645.nic	chr14	-	2248	4	ISM	ENSG00000139971.15	ENST00000334342.5	2380	5	-38	15174	-8	-91	5prime_fragment	FALSE	canonical	3	54	junction_3	3.29983164553722	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTCAAAAGAAGAATAATATT	-58151108	True	NA	-100	True	NA	NA	NA	58152221	58131297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_58131722_58133089_58133342_58137989_58139415_58152074
transcript_58646.known	chr14	+	2408	13	FSM	ENSG00000131966.14	ENST00000254286.9	2408	13	0	0	0	0	multi-exon	FALSE	non_canonical	2	219	junction_5	67.456313023072	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGGCTTCATTCTTT	58194757	True	NA	5	True	AATGAA	-17	NA	58200148	58235636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_58200295_58202854_58202928_58207935_58208019_58208998_58209108_58211291_58211400_58213630_58213699_58215204_58215285_58219693_58219730_58223621_58223702_58223782_58223857_58230398_58230481_58232065_58232268_58234369
transcript_58648.nic	chr14	+	1063	12	ISM	ENSG00000131966.14	ENST00000254286.9	2408	13	-28	3475	-21	0	5prime_fragment	FALSE	non_canonical	2	219	junction_5	70.4431075759629	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGGTATTTGGTAGAAAA	58194729	True	NA	NA	False	NA	NA	NA	58200120	58232161	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_58200295_58202854_58202928_58207935_58208019_58208998_58209108_58211291_58211400_58213630_58213699_58215204_58215285_58219693_58219730_58223621_58223702_58223782_58223857_58230398_58230481_58232065
transcript_58652.known	chr14	+	540	4	FSM	ENSG00000131966.14	ENST00000556312.5	540	4	0	0	0	0	multi-exon	FALSE	canonical	3	401	junction_3	34.3155293643498	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGTGTATGGCACACAG	58194778	True	NA	NA	False	AATAAA	-18	NA	58200169	58209257	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_58200295_58202854_58202928_58207935_58208019_58208998
transcript_58653.known	chr14	+	1602	13	FSM	ENSG00000131966.14	ENST00000545307.6	1602	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	116.961175894682	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATTTATATCAATAAAGTA	58200067	False	NA	-17	True	NA	NA	NA	58200079	58234760	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_58200295_58202854_58202928_58207935_58208019_58208998_58209108_58211291_58211411_58213640_58213699_58215204_58215285_58219693_58219730_58223621_58223702_58223782_58223857_58230398_58230481_58232065_58232268_58234369
transcript_58654.known	chr14	+	955	11	FSM	ENSG00000100567.13	ENST00000216455.9	955	11	0	0	0	0	multi-exon	FALSE	canonical	3	2503	junction_3	208.499424459637	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTGAAGTTTGGTTAATA	58221145	True	NA	22	True	ATTAAA	-15	NA	58244842	58272004	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_58244942_58247749_58247833_58252118_58252243_58257744_58257847_58257924_58257999_58260947_58261021_58263704_58263771_58267473_58267521_58270417_58270486_58270933_58270999_58271850
transcript_58666.known	chr14	+	925	5	FSM	ENSG00000100567.13	ENST00000553665.5	925	5	0	0	0	0	multi-exon	FALSE	canonical	3	2503	junction_3	255.452539623312	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGGTTTCAATAGT	58221158	True	NA	NA	False	AATAGA	-33	NA	58244855	58258454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_58244942_58247749_58247833_58252118_58252243_58257744_58257847_58257924
transcript_58667.known	chr14	-	741	5	FSM	ENSG00000257621.9	ENST00000554378.5	741	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	40.034360242172	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTGAACCCAGGAGGCAG	-58296049	True	NA	NA	False	NA	NA	NA	58298134	58267103	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_58267394_58273978_58274011_58285590_58285757_58291634_58291708_58297954
transcript_58670.known	chr14	-	1039	4	FSM	ENSG00000257621.9	ENST00000556002.5	1039	4	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_2	40.9986449640581	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAATTAAGCATTCTTTC	-58296017	True	NA	NA	False	NA	NA	NA	58298102	58266607	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_58267394_58273978_58274011_58291634_58291708_58297954
transcript_58671.known	chr14	-	903	4	FSM	ENSG00000257621.9	ENST00000555275.5	903	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	33.0756708170825	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACGACTGGTGAAGACATC	-58296037	True	NA	NA	False	TATAAA	-43	NA	58298122	58266888	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_58267394_58273978_58274136_58291634_58291708_58297954
transcript_58675.known	chr14	-	1983	3	FSM	ENSG00000257621.9	ENST00000555707.5	1983	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	40.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCTTGACTCATGTATTG	-58296044	True	NA	NA	False	AATAAA	-16	NA	58298129	58272400	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_58274136_58291634_58291708_58297954
transcript_58679.nic	chr14	+	1810	16	ISM	ENSG00000032219.19	ENST00000395168.7	4051	24	-6	20956	-5	-7902	5prime_fragment	FALSE	canonical	3	33	junction_10	10.0651212941855	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGAGGATTCTGACAAAGA	58296617	True	NA	NA	False	ATTAAA	-4	NA	58298549	58351270	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_58298701_58299797_58299861_58301579_58301691_58304943_58305010_58306021_58306113_58318541_58318622_58318710_58318806_58323484_58323618_58328236_58328317_58329527_58329605_58330002_58330170_58344694_58344768_58346410_58346506_58347019_58347118_58347646_58347879_58351072
transcript_58680.nic	chr14	+	1586	15	ISM	ENSG00000032219.19	ENST00000395168.7	4051	24	-118	24486	-66	-11432	5prime_fragment	FALSE	canonical	3	33	junction_10	10.3972131273879	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTTAGAAGAATCAATGGA	58298420	False	NA	NA	False	AGTAAA	-14	NA	58298437	58347740	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_58298701_58299797_58299861_58301579_58301691_58304943_58305010_58306021_58306113_58318541_58318622_58318710_58318806_58323484_58323618_58328236_58328317_58329527_58329605_58330002_58330170_58344694_58344768_58346410_58346506_58347019_58347118_58347646
transcript_58681.nic	chr14	+	2188	15	ISM	ENSG00000032219.19	ENST00000395168.7	4051	24	-617	24383	-565	-11329	5prime_fragment	FALSE	canonical	3	33	junction_10	10.3972131273879	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTGAAAGAGAAGAGATAGAA	58297921	False	NA	NA	False	NA	NA	NA	58297938	58347843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_58298701_58299797_58299861_58301579_58301691_58304943_58305010_58306021_58306113_58318541_58318622_58318710_58318806_58323484_58323618_58328236_58328317_58329527_58329605_58330002_58330170_58344694_58344768_58346410_58346506_58347019_58347118_58347646
transcript_58682.known	chr14	+	8558	31	FSM	ENSG00000100578.18	ENST00000652326.2	8558	31	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	14.941515615522	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAATATGTTTCTTATTG	58426157	True	NA	10	True	AATAAA	-23	NA	58427718	58551297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_58428464_58429362_58429434_58430647_58430718_58432387_58432458_58442705_58442881_58443953_58444176_58448339_58448494_58450578_58450747_58453349_58453474_58456701_58456811_58457758_58457980_58458472_58458546_58459842_58460071_58460985_58461161_58465834_58466030_58467734_58467923_58470612_58470724_58472198_58472280_58474606_58474798_58477122_58477242_58482512_58482713_58487006_58487167_58487886_58488110_58488620_58488875_58490163_58490241_58492143_58492276_58498782_58498961_58508554_58508710_58512521_58512628_58540070_58540137_58547780
transcript_58684.known	chr14	+	4807	30	FSM	ENSG00000100578.18	ENST00000261244.9	4807	30	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_12	19.2376711295186	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCCAATATTTTAAAATAAA	58427964	True	NA	NA	False	NA	NA	NA	58427989	58548045	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_58428464_58429362_58429434_58430647_58430718_58432387_58432458_58442705_58442881_58443953_58444176_58448339_58448494_58450578_58450747_58453349_58453474_58456701_58456811_58457758_58457980_58458472_58458546_58460985_58461161_58465834_58466030_58467734_58467923_58470612_58470724_58472198_58472280_58474606_58474798_58477122_58477242_58482512_58482713_58487006_58487167_58487886_58488110_58488620_58488875_58490163_58490241_58492143_58492276_58498782_58498961_58508554_58508710_58512521_58512628_58540070_58540137_58547780
transcript_58686.known	chr14	+	5942	30	FSM	ENSG00000100578.18	ENST00000650904.1	5942	30	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_17	19.3210561425543	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATAAACCTGTGAAACAT	58426131	True	NA	-68	True	TATAAA	-3	NA	58427692	58548736	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_58428464_58429362_58429434_58430647_58430718_58432387_58432458_58442705_58442881_58443953_58444176_58448339_58448494_58450578_58450747_58453349_58453474_58456701_58456811_58457758_58457980_58458472_58458546_58459842_58460071_58460985_58461161_58465834_58466030_58467734_58467923_58470612_58470724_58474606_58474798_58477122_58477242_58482512_58482713_58487006_58487167_58487886_58488110_58488620_58488875_58490163_58490241_58492143_58492276_58498782_58498961_58508554_58508710_58512521_58512628_58540070_58540137_58547780
transcript_58693.nic	chr14	+	2148	6	ISM	ENSG00000100578.18	ENST00000650845.1	6431	29	-28	77305	-2	-175	5prime_fragment	FALSE	canonical	3	44	junction_2	13.0935098426663	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGCCTGGCATGGTGGCA	58426129	True	NA	NA	False	NA	NA	NA	58427690	58444942	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_58428464_58429362_58429434_58430647_58430718_58432387_58432458_58442705_58442881_58443953
transcript_58695.known	chr14	-	430	4	FSM	ENSG00000100575.14	ENST00000555404.5	430	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	113.329411696856	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTCCTGATGGATGAAC	-58420040	True	NA	NA	False	AATGAA	-43	NA	58427187	58409033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_58409169_58410842_58410939_58411906_58411972_58427053
transcript_58699.known	chr14	+	2571	4	FSM	ENSG00000165617.15	ENST00000335867.4	2571	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	34.7978287956144	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCTCCCTAGTTGCCA	58638165	False	NA	NA	False	NA	NA	NA	58638178	58647170	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_58638548_58640735_58640869_58641591_58641748_58645257
transcript_58701.known	chr14	+	3828	4	FSM	ENSG00000165617.15	ENST00000395153.8	3828	4	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_3	25.0909456887451	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGCTGGTTATTGGTG	58636768	True	NA	5	True	TATAAA	-23	NA	58637961	58648321	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_58638548_58640735_58640869_58641591_58641748_58645368
transcript_58704.known	chr14	+	376	1	FSM	ENSG00000213598.4	ENST00000480540.1	376	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTGATCGTCAGATACAT	NA	False	NA	NA	False	NA	NA	NA	58794653	58795029	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_58794700_58795000
transcript_58705.known	chr14	+	5890	25	FSM	ENSG00000100592.16	ENST00000360909.8	5890	25	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_8	11.0471684406257	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATATGCTTTCTATGAAT	59186488	True	NA	16	True	AATAAA	-22	NA	59188666	59371403	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_59188769_59263440_59263661_59291216_59291307_59315279_59315352_59320489_59320585_59322891_59323226_59324127_59324239_59324350_59324455_59325663_59325731_59325959_59326078_59326509_59326649_59326932_59326992_59330500_59330689_59331208_59331509_59331812_59331921_59340073_59340181_59347538_59347624_59352525_59352633_59353875_59353965_59355164_59355334_59359396_59359505_59360801_59360863_59363650_59363783_59367428_59367600_59368649
transcript_58709.nic	chr14	+	3144	24	ISM	ENSG00000100592.16	ENST00000360909.8	5890	25	-60	3856	-39	0	5prime_fragment	FALSE	canonical	3	43	junction_8	10.9768617274585	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATGAGAAAGAAAAAGGAGG	NA	False	NA	NA	False	AAGAAA	-8	NA	59188606	59367547	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_59188769_59263440_59263661_59291216_59291307_59315279_59315352_59320489_59320585_59322891_59323226_59324127_59324239_59324350_59324455_59325663_59325731_59325959_59326078_59326509_59326649_59326932_59326992_59330500_59330689_59331208_59331509_59331812_59331921_59340073_59340181_59347538_59347624_59352525_59352633_59353875_59353965_59355164_59355334_59359396_59359505_59360801_59360863_59363650_59363783_59367428
transcript_58710.nnic	chr14	+	3178	24	NNC	ENSG00000100592.16	novel	5890	25	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	13.5705117873326	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATGAGAAAGAAAAAGGAGG	59186540	True	NA	NA	False	AAGAAA	-8	NA	59188718	59367547	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_+_59188915_59263440_59263661_59291216_59291307_59315279_59315352_59320489_59320585_59322891_59323226_59324127_59324239_59324350_59324455_59325663_59325731_59325959_59326078_59326509_59326649_59326932_59326992_59330500_59330689_59331208_59331509_59331812_59331921_59340073_59340181_59347538_59347624_59352525_59352633_59353875_59353965_59355164_59355334_59359396_59359505_59360801_59360863_59363650_59363783_59367428
transcript_58716.nic	chr14	+	587	5	ISM	ENSG00000100592.16	ENST00000360909.8	5890	25	-60	50871	-39	-2525	5prime_fragment	FALSE	canonical	3	55	junction_2	3.34477204006491	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGTAAAACTATAGAGAGT	NA	False	NA	24	True	AAGAAA	-1	NA	59188606	59320532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_59188769_59263440_59263661_59291216_59291307_59315279_59315352_59320489
transcript_58720.known	chr14	+	582	3	FSM	ENSG00000100592.16	ENST00000556135.1	582	3	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGTAACCATCATTCATAA	59186520	True	NA	NA	False	NA	NA	NA	59188698	59291508	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_59188769_59263440_59263661_59291216
transcript_58724.known	chr14	+	2524	8	FSM	ENSG00000050130.18	ENST00000356057.9	2524	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	287.754288607911	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAATCCTCAATTGAGTA	NA	False	NA	68	True	ATTAAA	-15	NA	59484442	59505404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_59484594_59484989_59485117_59486730_59486805_59487673_59487829_59495017_59495225_59498726_59498909_59501190_59501268_59503853
transcript_58726.known	chr14	+	2347	7	FSM	ENSG00000050130.18	ENST00000616435.5	2347	7	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_1	97.135072050327	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCAATTGAGTAATTGTA	59478031	True	NA	74	True	ATTAAA	-21	NA	59484516	59505410	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_59484594_59486712_59486805_59487673_59487829_59495017_59495225_59498726_59498909_59501190_59501268_59503853
transcript_58728.known	chr14	+	1191	7	FSM	ENSG00000050130.18	ENST00000553941.5	1191	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	239.373313745149	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTAATATTATCTGCTACA	59478083	True	NA	NA	False	NA	NA	NA	59484568	59504274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_59484594_59486680_59486805_59487673_59487829_59495017_59495225_59498726_59498909_59501190_59501268_59503853
transcript_58730.known	chr14	+	2137	7	FSM	ENSG00000050130.18	ENST00000554271.5	2137	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	242.279051692235	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTCAATGTTTTGACA	59478059	True	NA	NA	False	AATAAA	-15	NA	59484544	59504705	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_59485117_59486712_59486805_59487673_59487829_59495017_59495225_59498726_59498909_59501190_59501268_59503853
transcript_58735.nic	chr14	+	1578	6	NIC	ENSG00000050130.18	novel	1636	7	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_1	229.047593307592	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTCAATGTTTTGACA	59478003	True	NA	NA	False	AATAAA	-15	NA	59484488	59504705	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_59484594_59487673_59487829_59495017_59495225_59498726_59498909_59501190_59501268_59503853
transcript_58743.known	chr14	-	1516	5	FSM	ENSG00000126790.12	ENST00000247194.9	1516	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	24.0767003553228	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTACAAGCTCATTATTTT	-59483289	True	NA	NA	False	ATTAAA	-34	NA	59484408	59472605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_59473091_59475868_59476007_59476091_59476215_59479181_59479352_59483808
transcript_58747.nic	chr14	-	1418	5	NIC	ENSG00000126790.12	novel	1516	5	NA	NA	-29	-1	combination_of_known_junctions	FALSE	canonical	3	44	junction_4	19.5879427199489	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTCATTCTTTGTAAAAT	NA	False	NA	-22	True	AATAAA	-17	NA	59484437	59472861	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_59473091_59475868_59476007_59476091_59476215_59479181_59479352_59483679
transcript_58753.known	chr14	-	758	4	FSM	ENSG00000126790.12	ENST00000481608.1	758	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	22.2910046630673	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGGCACCCTTAGCTT	-59482887	False	NA	NA	False	NA	NA	NA	59484006	59475868	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_59476007_59476091_59476215_59479181_59479352_59483679
transcript_58754.known	chr14	-	3239	9	FSM	ENSG00000139970.18	ENST00000267484.10	3239	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	6.76387462923434	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTTCTCCCTCTCTTCT	-59870711	True	NA	-8	True	AATAAA	-15	NA	59870776	59595982	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_59596788_59603064_59603124_59603211_59603259_59603851_59603922_59605367_59605507_59607284_59607493_59726918_59727669_59745707_59746482_59870389
transcript_58757.known	chr14	-	1703	7	FSM	ENSG00000139970.18	ENST00000342503.8	1703	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	5.27309733985213	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCTCTCTTCTCATGCA	-59630804	True	NA	-2	True	AATAAA	-21	NA	59630814	59595976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_59596788_59603064_59603124_59603211_59603259_59603851_59603922_59605367_59605507_59607284_59607493_59630445
transcript_58761.known	chr14	+	18069	11	FSM	ENSG00000126773.13	ENST00000406854.6	18069	11	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	23.8671322114744	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGATTGCTTAAATTT	60090865	True	NA	NA	False	AATAAA	-16	NA	60091922	60148221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_60092420_60107585_60108328_60114699_60114880_60114973_60115462_60115718_60115820_60115940_60116061_60118328_60118693_60121195_60121300_60124217_60125252_60125636_60125824_60133969
transcript_58764.known	chr14	+	17339	10	FSM	ENSG00000126773.13	ENST00000317623.8	17339	10	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	25.2869946566497	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGATTGCTTAAATTT	NA	False	NA	NA	False	AATAAA	-16	NA	60091910	60148221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_60092420_60114699_60114880_60114973_60115462_60115718_60115820_60115940_60116061_60118328_60118693_60121195_60121300_60124217_60125252_60125636_60125824_60133969
transcript_58770.known	chr14	-	1956	7	FSM	ENSG00000100612.14	ENST00000557185.6	1956	7	0	0	0	0	multi-exon	FALSE	canonical	3	542	junction_3	25.2102272015854	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGTGCTTAGTATTAGT	-60161113	True	NA	NA	False	ATTAAA	-26	NA	60165398	60144118	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_60145014_60149352_60149569_60150064_60150188_60152938_60153179_60153958_60154066_60155999_60156153_60165176
transcript_58772.known	chr14	-	1361	6	FSM	ENSG00000100612.14	ENST00000554101.5	1361	6	0	0	0	0	multi-exon	FALSE	canonical	3	542	junction_2	20.5465325541805	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAATAAATAAAAAA	-60165266	False	4285	NA	False	NA	NA	NA	60165293	60148947	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_60149569_60150064_60150188_60152938_60153179_60153958_60154066_60155999_60156153_60165176
transcript_58773.known	chr14	-	563	2	FSM	ENSG00000100612.14	ENST00000555171.1	563	2	0	0	0	0	multi-exon	FALSE	canonical	3	574	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCTTTTCTGCCACCT	-60161133	True	NA	NA	False	NA	NA	NA	60165418	60155831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_60156153_60165176
transcript_58780.nic	chr14	+	2574	7	NIC	ENSG00000100614.18	novel	8231	6	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	80.3853565990446	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAATCATGTATGTGTAAT	60247795	True	NA	18	True	AATAAA	-23	NA	60249232	60293355	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_60249678_60277004_60277092_60282683_60283538_60285623_60285742_60289805_60289915_60291396_60291455_60292452
transcript_58781.nic	chr14	+	2580	7	NIC	ENSG00000100614.18	novel	8231	6	NA	NA	21	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	79.6380701814291	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAATCATGTATGTGTAAT	60247804	True	NA	18	True	AATAAA	-23	NA	60249241	60293355	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_60249678_60250379_60250482_60282683_60283538_60285623_60285742_60289805_60289915_60291396_60291455_60292452
transcript_58784.known	chr14	+	8231	6	FSM	ENSG00000100614.18	ENST00000395076.9	8231	6	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_3	16.5819178625393	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGTATTTATGATTG	60247783	True	NA	NA	False	AATAAA	-16	NA	60249220	60299087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_60249678_60282683_60283538_60285623_60285742_60289805_60289915_60291396_60291455_60292452
transcript_58788.known	chr14	+	4125	4	FSM	ENSG00000100614.18	ENST00000325658.3	4125	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	74.2473344078201	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGATCCTTGCTTTTTG	60249430	False	NA	7	True	AATAAA	-19	NA	60249440	60288555	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_60249678_60250379_60250482_60282683_60283538_60285623
transcript_58789.nic	chr14	+	2276	3	ISM	ENSG00000100614.18	ENST00000395076.9	8231	6	-50	12549	-50	-2017	5prime_fragment	FALSE	canonical	3	167	junction_1	3	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAATAGCGTTAAAA	60249152	False	NA	NA	False	AAGAAA	-5	NA	60249170	60286538	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_60249678_60282683_60283538_60285623
transcript_58790.nic	chr14	+	4228	3	ISM	ENSG00000100614.18	ENST00000395076.9	8231	6	15	10532	15	0	5prime_fragment	FALSE	canonical	3	167	junction_1	3	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGATCCTTGCTTTTTG	60247798	True	NA	7	True	AATAAA	-19	NA	60249235	60288555	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_60249678_60282683_60283538_60285623
transcript_58793.known	chr14	-	2780	18	FSM	ENSG00000179008.9	ENST00000321731.8	2780	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	5.905835481417	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGATGTGACTGTTGA	-60485933	True	NA	-1	True	AATAAA	-14	NA	60486063	60435955	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_60437048_60442073_60442132_60455000_60455146_60456916_60457096_60458677_60458740_60461353_60461413_60461507_60461594_60465978_60466056_60466916_60467045_60468444_60468537_60469532_60469654_60471416_60471460_60471551_60471740_60478299_60478390_60483690_60483818_60484880_60484938_60485029_60485087_60485944
transcript_58799.nic	chr14	-	3978	4	NIC	ENSG00000100625.9	novel	6491	3	NA	NA	-29	1294	combination_of_known_junctions	FALSE	canonical	3	97	junction_1	6.0184900284226	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGAAAATAATTTCTTCA	NA	False	NA	NA	False	AGTAAA	-32	NA	60724380	60711872	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_60714204_60719759_60720446_60723211_60724048_60724255
transcript_58801.nic	chr14	-	2826	4	NIC	ENSG00000100625.9	novel	6491	3	NA	NA	-29	142	combination_of_known_junctions	FALSE	canonical	3	97	junction_1	6.0184900284226	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACAATTGTTTTTGTTTA	NA	False	NA	NA	False	ATTAAA	-24	NA	60724380	60713024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_60714204_60719759_60720446_60723211_60724048_60724255
transcript_58807.known	chr14	-	6491	3	FSM	ENSG00000100625.9	ENST00000216513.5	6491	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	7	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTGCATTGAAAATTATTT	-60722391	True	NA	-16	True	AATAAA	-18	NA	60724351	60709538	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_60714204_60719759_60720446_60723211
transcript_58808.nic	chr14	+	1224	9	NIC	ENSG00000020426.11	novel	2648	8	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_8	179.156879577648	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTGGTTTTTCTCTTA	60723421	True	NA	21	True	AATAAA	-18	NA	60734738	60968680	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_60734952_60796216_60796370_60798086_60798161_60808324_60808429_60811986_60812128_60818721_60818848_60879713_60879836_60968228_60968398_60968558
transcript_58810.known	chr14	+	2648	8	FSM	ENSG00000020426.11	ENST00000261245.9	2648	8	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_3	42.3883888606784	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTAGTTGCTATTGC	60723443	True	NA	NA	False	AATAAA	-27	NA	60734760	60969965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_60734952_60796216_60796370_60798086_60798161_60808324_60808429_60811986_60812128_60818721_60818848_60879713_60879836_60968228
transcript_58813.nic	chr14	+	597	5	ISM	ENSG00000020426.11	ENST00000539616.6	1220	7	-37	156639	-3	3024	5prime_fragment	FALSE	canonical	3	502	junction_3	30.5122926047847	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAACAAAGAAGATTATTTA	60723421	True	NA	NA	False	NA	NA	NA	60734738	60812039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_60734952_60796216_60796370_60798086_60798161_60808324_60808429_60811986
transcript_58815.known	chr14	+	1097	4	FSM	ENSG00000020426.11	ENST00000556764.5	1097	4	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_3	35.2262528363278	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGTTTTGAAAATATC	60723455	True	NA	NA	False	TATAAA	-36	NA	60734772	60809015	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_60734952_60796216_60796370_60798086_60798161_60808324
transcript_58818.known	chr14	+	612	2	FSM	ENSG00000020426.11	ENST00000555545.1	612	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGGCAACTTGCTGTC	60723424	True	NA	NA	False	NA	NA	NA	60734741	60753954	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_60734952_60753552
transcript_58822.known	chr14	+	1605	16	FSM	ENSG00000139974.16	ENST00000267488.9	1605	16	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_15	19.0717941823346	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTGGGTTGATCTTTTG	60980282	True	NA	4	True	AAAAAG	-25	NA	60981244	61052630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_60981383_60982507_60982639_60984729_60984804_61015903_61015957_61019540_61019581_61030444_61030524_61037058_61037142_61037624_61037684_61043146_61043213_61043449_61043504_61045345_61045426_61046066_61046168_61050511_61050637_61051786_61051932_61052040_61052136_61052348
transcript_58833.known	chr14	-	5304	5	FSM	ENSG00000126814.7	ENST00000261249.7	5304	5	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	7.1239034243875	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGCAATTTGTTTTAGC	-60978908	True	NA	2	True	AATAAA	-30	NA	60981079	60971440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_60975195_60975474_60976127_60977513_60977639_60979230_60979887_60980962
transcript_58834.nic	chr14	-	1673	5	NIC	ENSG00000126814.7	novel	5304	5	NA	NA	0	-3570	combination_of_known_junctions	FALSE	canonical	3	6	junction_4	60.4648658313239	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGTACTTTGCCTTATT	-60978908	True	NA	0	True	AATAAA	-29	NA	60981079	60975010	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_60975195_60975474_60976127_60977513_60977639_60979230_60979887_60981023
transcript_58835.known	chr14	+	3720	14	FSM	ENSG00000027075.17	ENST00000332981.11	3720	14	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_7	5.77179430224741	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTGTTTTGACTAGAAT	61321102	True	NA	10	True	AATAAA	-18	NA	61321578	61550976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_61322465_61391224_61391289_61443110_61443262_61445691_61445727_61449163_61449253_61450841_61450972_61453225_61453354_61457175_61457320_61457505_61457680_61485501_61485657_61529074_61529214_61530406_61530596_61547742_61547887_61549684
transcript_58840.known	chr14	+	3922	15	FSM	ENSG00000100644.17	ENST00000394997.5	3922	15	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	166.390016993514	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTTGATCAGCTTTTAT	61684353	True	NA	23	True	AATAAA	-19	NA	61695539	61748258	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_61695840_61720378_61720573_61721508_61721655_61721738_61721824_61726705_61726819_61727452_61727656_61732417_61732525_61734137_61734286_61736888_61737110_61738086_61738374_61740504_61740628_61740754_61741189_61744704_61744814_61745690_61745818_61746933
transcript_58843.known	chr14	+	3555	14	FSM	ENSG00000100644.17	ENST00000323441.10	3555	14	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_13	192.583402358317	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTTGATCAGCTTTTAT	61695766	False	NA	23	True	AATAAA	-19	NA	61695776	61748258	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_61695840_61720381_61720573_61721508_61721655_61721738_61721824_61726705_61726819_61727452_61727656_61732417_61732525_61734137_61734286_61736888_61737110_61738086_61738374_61740504_61740628_61740754_61741189_61744704_61744814_61746933
transcript_58855.nic	chr14	+	1634	10	ISM	ENSG00000100644.17	ENST00000337138.9	3946	15	-16	10095	-16	-2735	5prime_fragment	FALSE	canonical	3	507	junction_1	79.4552440212044	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACAGAATATAAATTTGGC	61684310	True	NA	36	True	NA	NA	NA	61695496	61738163	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_61695840_61720381_61720573_61721508_61721655_61721738_61721824_61726705_61726819_61727452_61727656_61732417_61732525_61734137_61734286_61736888_61737110_61738086
transcript_58858.known	chr14	+	2593	10	FSM	ENSG00000023608.5	ENST00000216294.5	2593	10	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_3	23.5172644751693	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGCAGTCACAATTGTT	61758720	True	NA	15	True	AATAAA	-18	NA	61762419	61796428	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_61762589_61766875_61767036_61767211_61767353_61768635_61768741_61776094_61776254_61778071_61778141_61778847_61778911_61782246_61782398_61792806_61792903_61794948
transcript_58866.nic	chr14	+	1040	8	ISM	ENSG00000023608.5	ENST00000216294.5	2593	10	-65	14073	-65	-14073	5prime_fragment	FALSE	canonical	3	162	junction_3	16.0242163678628	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTGAAACCAGCAGGAAGG	61758655	True	NA	NA	False	AAAAAG	-13	NA	61762354	61782355	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_61762589_61766875_61767036_61767211_61767353_61768635_61768741_61776094_61776254_61778071_61778141_61778847_61778911_61782246
transcript_58871.nic	chr14	+	806	5	ISM	ENSG00000023608.5	ENST00000216294.5	2593	10	-65	20168	-65	-20168	5prime_fragment	FALSE	canonical	3	162	junction_3	19.1360262332596	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACTTGTTTGGTGCCTCA	61758655	True	NA	NA	False	NA	NA	NA	61762354	61776260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_61762589_61766875_61767036_61767211_61767353_61768635_61768741_61776094
transcript_58872.nic	chr14	+	370	2	ISM	ENSG00000100644.17	ENST00000337138.9	3946	15	-16	27850	-16	-1416	5prime_fragment	FALSE	canonical	3	507	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCGAGATGCAGCCAGAT	61684310	True	NA	NA	False	AAGAAA	-2	NA	61695496	61720408	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_61695840_61720381
transcript_58884.known	chr14	-	2164	14	FSM	ENSG00000154001.14	ENST00000555899.1	2164	14	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	76.2319723571905	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATCGGTCTTC	-63537829	True	NA	NA	False	NA	NA	NA	63543298	63375760	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_63376109_63382070_63382158_63384443_63384572_63389611_63389732_63391816_63391868_63391971_63392026_63393819_63393929_63395225_63395286_63396585_63396717_63415139_63415233_63421992_63422095_63453688_63453886_63539528_63539693_63542778
transcript_58892.nic	chr14	-	1946	13	ISM	ENSG00000154001.14	ENST00000555899.1	2164	14	-115	6295	-36	0	5prime_fragment	FALSE	canonical	3	211	junction_12	38.780274911638	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTTTTTAAAGCTTTTT	NA	False	NA	-1	True	NA	NA	NA	63543413	63382055	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_63382158_63384443_63384572_63389611_63389732_63391816_63391868_63391971_63392026_63393819_63393929_63395225_63395286_63396585_63396717_63415139_63415233_63421992_63422095_63453688_63453886_63539528_63539693_63542778
transcript_58900.known	chr14	-	976	4	FSM	ENSG00000140006.12	ENST00000554717.1	976	4	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_3	57.249939349798	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTTATAAACAGATTTACT	-63639213	True	NA	NA	False	NA	NA	NA	63641853	63599262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_63599974_63624927_63625034_63641298_63641408_63641803
transcript_58902.known	chr14	-	1687	3	FSM	ENSG00000140006.12	ENST00000267522.7	1687	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	53.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGGACTTTTTAGAAGGA	-63641393	False	NA	-82	True	AGTAAA	-26	NA	63641407	63598501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_63599974_63624927_63625034_63641298
transcript_58903.known	chr14	-	3109	3	FSM	ENSG00000140006.12	ENST00000620954.2	3109	3	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	20.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTTGGGCAGTTATT	-63639231	True	NA	NA	False	ATTAAA	-20	NA	63641871	63597038	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_63599974_63624927_63625034_63641803
transcript_58911.nic	chr14	+	307	2	FSM	ENSG00000274015.3	ENST00000686344.1	314	2	-11	18	-11	-18	multi-exon	FALSE	canonical	3	71	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTCTTGATACTTTATT	63641841	True	NA	13	True	AATGAA	-27	NA	63642049	63651490	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_63642198_63651331
transcript_58912.known	chr14	-	3336	3	FSM	ENSG00000126821.8	ENST00000247225.7	3336	3	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	4	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGGTTTTGCTTTGTTTTG	-63727412	True	NA	NA	False	AATAAA	-20	NA	63728065	63684215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_63686657_63698568_63698659_63727260
transcript_58915.nic	chr14	+	3193	23	ISM	ENSG00000054654.20	ENST00000358025.7	21842	116	-86	231275	-86	58	5prime_fragment	FALSE	canonical	0	0	junction_18	3.63067737231197	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCCGTAGAGGAAGGAC	63852814	False	NA	NA	False	AATAAA	-14	NA	63852896	63995157	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_63853144_63909097_63909228_63940613_63940676_63941694_63941791_63941884_63941963_63942050_63942144_63949824_63950007_63954718_63954916_63961524_63961626_63963898_63964001_63967708_63967847_63976562_63976728_63977904_63978018_63978851_63979015_63980653_63980733_63980985_63981174_63982629_63982795_63983736_63983887_63986455_63986618_63990410_63990570_63990941_63991116_63993834_63993970_63995043
transcript_58918.nnic	chr14	+	3116	23	NNC	ENSG00000054654.20	novel	21777	115	NA	NA	-72	58	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.83976583308052	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCCGTAGAGGAAGGAC	63852828	False	NA	NA	False	AATAAA	-14	NA	63852910	63995157	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_+_63853081_63909097_63909228_63940613_63940676_63941694_63941791_63941884_63941963_63942050_63942144_63949824_63950007_63954718_63954916_63961524_63961626_63963898_63964001_63967708_63967847_63976562_63976728_63977904_63978018_63978851_63979015_63980653_63980733_63980985_63981174_63982629_63982795_63983736_63983887_63986455_63986618_63990410_63990570_63990941_63991116_63993834_63993970_63995043
transcript_58929.nic	chr14	+	4157	19	NIC	ENSG00000054654.20	novel	6766	36	NA	NA	-10437	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_14	42.4174215897311	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGTTGTACTGAATTC	64185389	True	NA	13	True	ATTAAA	-17	NA	64186316	64226432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_64186580_64188549_64188709_64190070_64190238_64202800_64202964_64208757_64208946_64209427_64209579_64209941_64210125_64211960_64212099_64212810_64213006_64214193_64214471_64216247_64216388_64218397_64218513_64219207_64219411_64220436_64220638_64221533_64221705_64223188_64223381_64224460_64224548_64224995_64225046_64225318
transcript_58931.nic	chr14	+	4124	19	ISM	ENSG00000054654.20	ENST00000394768.6	11095	63	110693	-2	-10446	0	3prime_fragment	FALSE	canonical	3	94	junction_17	28.9823807693869	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGTTGTACTGAATTC	64185380	True	NA	13	True	ATTAAA	-17	NA	64186307	64226432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_64186580_64188549_64188709_64190070_64190238_64202800_64202964_64208757_64208946_64209427_64209579_64209941_64210125_64211960_64212099_64212810_64213006_64214193_64214471_64216247_64216388_64218397_64218513_64219207_64219411_64220436_64220638_64221575_64221705_64223188_64223381_64224460_64224548_64224995_64225046_64225318
transcript_58932.nic	chr14	+	4199	19	NIC	ENSG00000054654.20	novel	21842	116	NA	NA	-10524	0	combination_of_known_junctions	FALSE	canonical	3	102	junction_17	28.1745551083873	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGTTGTACTGAATTC	NA	False	NA	13	True	ATTAAA	-17	NA	64186229	64226432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_64186580_64188549_64188709_64190070_64190238_64202800_64202964_64208757_64208946_64209427_64209579_64209941_64210125_64211960_64212099_64212810_64213006_64214193_64214471_64216247_64216388_64218397_64218513_64219207_64219411_64220436_64220638_64221575_64221705_64223188_64223381_64224460_64224548_64224998_64225046_64225318
transcript_58936.known	chr14	+	3229	24	FSM	ENSG00000054654.20	ENST00000674003.1	3229	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.93280036545917	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAAGCTTAGTGACAATA	NA	False	NA	NA	False	AATAGA	-10	NA	63761898	63995099	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_63761987_63852500_63852754_63909097_63909228_63940613_63940676_63941694_63941791_63941884_63941963_63942050_63942144_63949824_63950007_63954718_63954916_63961524_63961626_63963898_63964001_63967708_63967847_63976562_63976728_63977904_63978018_63978851_63979015_63980653_63980733_63980985_63981174_63982629_63982795_63983736_63983887_63986455_63986618_63990410_63990570_63990941_63991116_63993834_63993970_63995043
transcript_58937.nic	chr14	+	2329	18	ISM	ENSG00000054654.20	ENST00000358025.7	21842	116	-86	242666	-86	-11333	5prime_fragment	FALSE	canonical	1	2	junction_17	3.29831665150028	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGATCAGCCCACTTTTGA	63852814	False	NA	NA	False	GATAAA	-5	NA	63852896	63983766	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_63853144_63909097_63909228_63940613_63940676_63941694_63941791_63941884_63941963_63942050_63942144_63949824_63950007_63954718_63954916_63961524_63961626_63963898_63964001_63967708_63967847_63976562_63976728_63977904_63978018_63978851_63979015_63980653_63980733_63980985_63981174_63982629_63982795_63983736
transcript_58938.nic	chr14	+	2449	18	ISM	ENSG00000054654.20	ENST00000358025.7	21842	116	-86	242546	-86	-11213	5prime_fragment	FALSE	canonical	1	2	junction_17	3.29831665150028	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAATAATCATACTTTGT	63852814	False	NA	NA	False	TATAAA	-2	NA	63852896	63983886	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_63853144_63909097_63909228_63940613_63940676_63941694_63941791_63941884_63941963_63942050_63942144_63949824_63950007_63954718_63954916_63961524_63961626_63963898_63964001_63967708_63967847_63976562_63976728_63977904_63978018_63978851_63979015_63980653_63980733_63980985_63981174_63982629_63982795_63983736
transcript_58940.nnic	chr14	+	2372	18	NNC	ENSG00000054654.20	novel	21777	115	NA	NA	-72	-11213	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.69044403326073	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAATAATCATACTTTGT	63852828	False	NA	NA	False	TATAAA	-2	NA	63852910	63983886	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_+_63853081_63909097_63909228_63940613_63940676_63941694_63941791_63941884_63941963_63942050_63942144_63949824_63950007_63954718_63954916_63961524_63961626_63963898_63964001_63967708_63967847_63976562_63976728_63977904_63978018_63978851_63979015_63980653_63980733_63980985_63981174_63982629_63982795_63983736
transcript_58950.nic	chr14	+	2109	16	ISM	ENSG00000054654.20	ENST00000358025.7	21842	116	-86	245284	-86	-13951	5prime_fragment	FALSE	canonical	1	3	junction_11	3.24139887497152	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GACAAAGAAGGAAGAAATTA	63852814	False	NA	NA	False	NA	NA	NA	63852896	63981148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_63853144_63909097_63909228_63940613_63940676_63941694_63941791_63941884_63941963_63942050_63942144_63949824_63950007_63954718_63954916_63961524_63961626_63963898_63964001_63967708_63967847_63976562_63976728_63977904_63978018_63978851_63979015_63980653_63980733_63980985
transcript_58966.nic	chr14	+	3245	8	ISM	ENSG00000054654.20	ENST00000674144.1	12249	57	142920	9407	-22245	-9407	internal_fragment	FALSE	canonical	2	4	junction_4	3.02371578407382	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAAGAAATTAACAATGGG	64051722	False	NA	15	True	AAAAAG	-30	NA	64051742	64078517	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_64053658_64055943_64056267_64062750_64062896_64065431_64065651_64070644_64070911_64073967_64074137_64075944_64076101_64078465
transcript_58985.known	chr14	+	3154	28	FSM	ENSG00000100714.17	ENST00000652337.1	3154	28	0	0	0	0	multi-exon	FALSE	canonical	3	1297	junction_20	107.803433372567	1326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGCCTTAACAGACTGT	64368335	True	NA	9	True	AATAAA	-38	NA	64388352	64460025	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_64388469_64400792_64400878_64411089_64411150_64412471_64412526_64415357_64415495_64415638_64415740_64417887_64418025_64419813_64419926_64424803_64424932_64425729_64425828_64426018_64426193_64427336_64427474_64430183_64430231_64431531_64431640_64431786_64431862_64435568_64435672_64439095_64439173_64440125_64440267_64441384_64441454_64442053_64442166_64442262_64442403_64444692_64444735_64448216_64448318_64449444_64449623_64453753_64453862_64454722_64454876_64458213_64458308_64459758
transcript_58991.known	chr14	+	6814	27	FSM	ENSG00000100714.17	ENST00000545908.6	6814	27	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_26	286.402479349455	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTTCAGTTCCCTTTT	64387985	True	NA	15	True	AATAAA	-19	NA	64388030	64463457	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_64388469_64400792_64400878_64411089_64411150_64412471_64412526_64415357_64415495_64415638_64415740_64417887_64418025_64419813_64419926_64424803_64424932_64425729_64425828_64426018_64426193_64427336_64427474_64430183_64430231_64431531_64431640_64431786_64431862_64435568_64435672_64439095_64439173_64440125_64440267_64441384_64441454_64442053_64442166_64442262_64442403_64444692_64444735_64448216_64448318_64449444_64449623_64453753_64453862_64454722_64454876_64459758
transcript_59.known	ERCC-00160	+	727	1	FSM	ERCC-00160A	DQ883658	727	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00160_+_0_700
transcript_59002.known	chr14	+	3082	26	FSM	ENSG00000100714.17	ENST00000557370.3	3082	26	0	0	0	0	multi-exon	FALSE	canonical	3	1297	junction_20	92.8941246796588	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGGGGTAGTGCTAACAT	64368344	True	NA	NA	False	NA	NA	NA	64388361	64455173	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_64388469_64400792_64400878_64411089_64411150_64412471_64412526_64415357_64415495_64415638_64415740_64417887_64418025_64419813_64419926_64424803_64424932_64425729_64425828_64426018_64426193_64427336_64427474_64430183_64430231_64431531_64431640_64431786_64431862_64435568_64435672_64439095_64439173_64440125_64440267_64441384_64441454_64442053_64442166_64442262_64442403_64444692_64444735_64448216_64448318_64449444_64449623_64453753_64453862_64454722
transcript_59028.nic	chr14	+	2817	17	ISM	ENSG00000100714.17	ENST00000557370.3	3082	26	-331	15255	0	337	5prime_fragment	TRUE	canonical	3	1330	junction_8	68.2382945548172	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAACTCAGGGTCTTGGA	64387985	True	NA	NA	False	NA	NA	NA	64388030	64439918	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_64388469_64400792_64400878_64411089_64411150_64412471_64412526_64415357_64415495_64415638_64415740_64417887_64418025_64419813_64419926_64424803_64424932_64425729_64425828_64426018_64426193_64427336_64427474_64430183_64430231_64431531_64431640_64431786_64431862_64435568_64435672_64439095
transcript_59048.known	chr14	+	4119	3	FSM	ENSG00000126804.14	ENST00000358738.3	4119	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	49.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTCTGTATATTACTT	64504562	False	NA	NA	False	AATAAA	-26	NA	64504573	64533690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_64504947_64521486_64523403_64531860
transcript_59050.known	chr14	-	10365	3	FSM	ENSG00000089775.12	ENST00000608382.6	10365	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	28	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCATGGTGTCCTTTCATG	-64503738	True	NA	-1	True	AATAAA	-18	NA	64503838	64478050	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_64488058_64490360_64490541_64503660
transcript_59052.known	chr14	+	6487	2	FSM	ENSG00000179841.8	ENST00000394718.4	6487	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTATTCAGATCTTTTAA	64464978	True	NA	6	True	AATAAA	-16	NA	64465498	64474503	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_64465614_64468131
transcript_59054.known	chr14	+	3642	2	FSM	ENSG00000126804.14	ENST00000683701.1	3642	2	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTTTTAATGTGAATTAC	64503885	True	NA	NA	False	AATAAA	-19	NA	64504769	64524951	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_64504947_64521486
transcript_59058.known	chr14	+	2497	1	FSM	ENSG00000126803.10	ENST00000247207.7	2497	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	315	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACTGTCTTGGAGTTTTC	64537688	True	NA	10	True	AGTAAA	-19	NA	64540740	64543237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_64540700_64543200
transcript_59062.nic	chr14	+	4959	18	NIC	ENSG00000126822.18	novel	10526	17	NA	NA	-61	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_15	16.6822533806039	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTGTGAACTCCTTCCT	64704351	False	NA	17	True	NA	NA	NA	64704362	64744345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_64704705_64727592_64727983_64728995_64729094_64730242_64730313_64730641_64730689_64730798_64730950_64731037_64731170_64731360_64731544_64731713_64731807_64732094_64732182_64732426_64732461_64732802_64732902_64736852_64736892_64737355_64737376_64737861_64738138_64738741_64738856_64741035_64742456_64742981
transcript_59063.nic	chr14	+	4871	18	NIC	ENSG00000126822.18	novel	4702	17	NA	NA	-67	-175	combination_of_known_junctions	FALSE	canonical	3	30	junction_14	14.6407971496251	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGGTATGATGTGCGT	64704345	False	NA	20	True	AATGAA	-23	NA	64704356	64744164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_64704705_64727592_64727983_64728995_64729094_64730242_64730313_64730641_64730689_64730798_64730950_64731037_64731170_64731360_64731544_64731713_64731807_64732094_64732182_64732426_64732461_64732802_64732902_64736852_64736892_64737355_64737376_64737861_64738225_64738741_64738856_64741035_64742456_64742981
transcript_59064.nic	chr14	+	4805	18	NIC	ENSG00000126822.18	novel	4702	17	NA	NA	71	-91	combination_of_known_junctions	FALSE	canonical	3	30	junction_14	14.6407971496251	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTGAGGGTTGTTGTG	64701573	True	NA	10	True	AATGAA	-17	NA	64704506	64744248	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_64704705_64727592_64727983_64728995_64729094_64730242_64730313_64730641_64730689_64730798_64730950_64731037_64731170_64731360_64731544_64731713_64731807_64732094_64732182_64732426_64732461_64732802_64732902_64736852_64736892_64737355_64737376_64737861_64738225_64738741_64738856_64741035_64742456_64742981
transcript_59065.nic	chr14	+	5156	18	NIC	ENSG00000126822.18	novel	4702	17	NA	NA	151	0	combination_of_known_junctions	TRUE	canonical	3	30	junction_14	14.6407971496251	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTGTGAACTCCTTCCT	64704241	False	NA	17	True	NA	NA	NA	64704252	64744345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_64704705_64727592_64727983_64728995_64729094_64730242_64730313_64730641_64730689_64730798_64730950_64731037_64731170_64731360_64731544_64731713_64731807_64732094_64732182_64732426_64732461_64732802_64732902_64736852_64736892_64737355_64737376_64737861_64738225_64738741_64738856_64741035_64742456_64742981
transcript_59072.known	chr14	+	10526	17	FSM	ENSG00000126822.18	ENST00000247226.13	10526	17	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_14	16.6339261751398	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTCTGATACATAGTAA	64701490	True	NA	8	True	ATTAAA	-16	NA	64704423	64750249	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_64704705_64727592_64727983_64728995_64729094_64730242_64730313_64730641_64730689_64730798_64730950_64731037_64731170_64731360_64731544_64731713_64731807_64732094_64732182_64732426_64732461_64732802_64732902_64736852_64736892_64737355_64737376_64738741_64738856_64741035_64742456_64742981
transcript_5909.known	chr1	-	4631	18	FSM	ENSG00000134644.16	ENST00000424085.6	4631	18	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_15	118.39626151397	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGTGCTTTATTTTAAC	-31052333	True	NA	-2	True	AATACA	-16	NA	31065695	30931505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_30933343_30936642_30936836_30941150_30941273_30941997_30942124_30945345_30945484_30950132_30950262_30952233_30952364_30953713_30953982_30964673_30964911_30965981_30966279_30967166_30967311_30968353_30968493_30974650_30974803_30980061_30980164_30981311_30981406_31028795_31028865_31059203_31059578_31065615
transcript_59096.known	chr14	+	4702	17	FSM	ENSG00000126822.18	ENST00000471182.7	4702	17	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_13	15.0891879751695	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTATGTGTGAACTCCTTC	NA	False	NA	15	True	NA	NA	NA	64727592	64744343	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_64727983_64728995_64729094_64730242_64730313_64730641_64730689_64730798_64730950_64731037_64731170_64731360_64731544_64731713_64731807_64732094_64732182_64732426_64732461_64732802_64732902_64736852_64736892_64737355_64737376_64737861_64738225_64738741_64738856_64741035_64742456_64742981
transcript_59097.known	chr14	+	1468	14	FSM	ENSG00000125954.13	ENST00000549987.1	1468	14	0	0	0	0	multi-exon	FALSE	canonical	2	27	junction_3	561.791586784858	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTTTATACGTTTCAATA	64901351	True	NA	-36	True	NA	NA	NA	64914492	65061361	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_64914535_64923990_64924127_64926009_64926081_65004248_65004314_65012316_65012390_65015624_65015717_65027452_65027600_65027697_65027782_65032609_65032697_65040789_65040920_65044310_65044444_65053237_65053350_65054574_65054690_65061180
transcript_59099.known	chr14	+	1847	13	FSM	ENSG00000125954.13	ENST00000552941.6	1847	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	483.230700310134	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTGCCTCTGCCTCTCGA	64901343	True	NA	NA	False	NA	NA	NA	64914484	65061803	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_64914535_64923990_64924127_65004248_65004314_65012316_65012390_65015624_65015717_65027452_65027600_65027697_65027782_65032609_65032697_65040789_65040920_65044310_65044444_65053237_65053350_65054574_65054690_65061180
transcript_59102.known	chr14	+	3518	4	FSM	ENSG00000258289.10	ENST00000549115.7	3518	4	0	0	0	0	multi-exon	FALSE	canonical	3	1462	junction_2	170.241005636128	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTCTTCTTTTTACTT	64901313	True	NA	16	True	AATAAA	-26	NA	64914454	64935368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_64914535_64923990_64924127_64926009_64926081_64932137
transcript_59105.known	chr14	+	1023	4	FSM	ENSG00000258289.10	ENST00000551093.6	1023	4	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_3	791.714314355599	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGATTTGTTGAGATGAG	64901335	True	NA	NA	False	NA	NA	NA	64914476	64944056	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_64914535_64923990_64924127_64926009_64926081_64943298
transcript_59106.known	chr14	+	439	3	FSM	ENSG00000258289.10	ENST00000548752.7	439	3	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_2	848.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGCATATTTTTTTTC	64901273	True	NA	52	True	AATACA	-41	NA	64914414	64932320	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_64914535_64923990_64924127_64932137
transcript_59107.known	chr14	-	922	2	FSM	ENSG00000176153.13	ENST00000389614.6	922	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCAGCCTGTGTGTGTGT	-64942644	True	NA	-5	True	AATAAA	-16	NA	64942745	64939157	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_64939839_64942504
transcript_59108.known	chr14	-	1084	3	NNC	ENSG00000176153.13	novel	1134	3	NA	NA	-159	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGTGTGTGTTCTTT	-64942895	False	NA	0	True	AATAAA	-21	NA	64942905	64939152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_-_64939839_64942504_64942607_64942609
transcript_59111.known	chr14	-	3518	8	FSM	ENSG00000139998.16	ENST00000642625.1	3518	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	166.594338047209	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGTGTGGCTGCCTGGATG	-64972153	False	NA	-5	True	AATAAA	-16	NA	64972197	64945815	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_64948513_64948667_64948734_64950324_64950415_64951073_64951152_64951602_64951664_64952510_64952572_64957939_64958160_64971952
transcript_59112.known	chr14	-	3391	7	FSM	ENSG00000139998.16	ENST00000267512.9	3391	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	132.644889334895	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGGCTGCCTGGATGAG	-64972113	False	NA	-3	True	AATAAA	-18	NA	64972157	64945813	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_64948513_64948667_64948734_64950324_64950415_64950942_64951152_64951602_64951664_64952510_64952572_64971952
transcript_59113.known	chr14	-	3437	7	FSM	ENSG00000139998.16	ENST00000533601.7	3437	7	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_6	25.8005167906898	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGTGTGGCTGCCTGGATG	-64967888	True	NA	-5	True	AATAAA	-16	NA	64972336	64945815	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_64948513_64948667_64948734_64950324_64950415_64951073_64951152_64951602_64951664_64952510_64952572_64971952
transcript_59117.nic	chr14	+	2889	13	NIC	ENSG00000257365.8	novel	2711	12	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_7	46.9695527857024	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGTCTCTTATTTGTG	64985242	True	NA	4	True	AATAAA	-15	NA	64986861	65062650	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_64987098_65004248_65004314_65012316_65012390_65015624_65015717_65027452_65027600_65027697_65027782_65032358_65032504_65032609_65032697_65040789_65040920_65044310_65044444_65053237_65053350_65054574_65054690_65061180
transcript_59120.known	chr14	+	2711	12	FSM	ENSG00000257365.8	ENST00000246166.3	2711	12	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_10	12.4389417848655	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGTCTCTTATTTGTG	64985275	True	NA	4	True	AATAAA	-15	NA	64986894	65062650	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_64987098_65004248_65004314_65012316_65012390_65015624_65015717_65027452_65027600_65027697_65027782_65032609_65032697_65040789_65040920_65044310_65044444_65053237_65053350_65054574_65054690_65061180
transcript_59130.known	chr14	-	623	6	FSM	ENSG00000125952.20	ENST00000553928.5	623	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	137.418193846375	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATAAAAACTGTCTGTCT	-65102328	False	NA	NA	False	NA	NA	NA	65102360	65076457	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_65076664_65077327_65077429_65077912_65078037_65093707_65093816_65101545_65101573_65102303
transcript_59131.known	chr14	-	2097	6	FSM	ENSG00000125952.20	ENST00000394606.6	2097	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	139.949133616468	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGGTGGTGTCTTCTT	-65093166	True	NA	-3	True	AATAAA	-17	NA	65102519	65075126	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_65076664_65077343_65077429_65077912_65078037_65093707_65093816_65101545_65101573_65102303
transcript_59136.known	chr14	-	2010	5	FSM	ENSG00000125952.20	ENST00000358664.9	2010	5	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_3	116.77836914429	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGGTGGTGTCTTCTT	-65093164	True	NA	-3	True	AATAAA	-17	NA	65102517	65075126	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_65076664_65077912_65078037_65093707_65093816_65101545_65101573_65102303
transcript_59138.known	chr14	-	615	5	FSM	ENSG00000125952.20	ENST00000556979.5	615	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	135.424102359957	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTGACCTTCCAGGCTCA	-65093164	True	NA	NA	False	AATAAA	-22	NA	65102517	65077286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_65077429_65077912_65078037_65093707_65093816_65101545_65101573_65102303
transcript_59141.known	chr14	-	1973	4	FSM	ENSG00000125952.20	ENST00000358402.8	1973	4	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_3	67.8871612800732	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTGGTGTCTTCTTACC	-65093151	True	NA	0	True	AATAAA	-20	NA	65102504	65075123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_65076664_65077912_65078037_65093707_65093816_65102303
transcript_59142.known	chr14	-	474	4	FSM	ENSG00000125952.20	ENST00000556892.5	474	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	182.435376686285	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGACAACAGCCTCTACA	-65102663	True	NA	NA	False	NA	NA	NA	65102695	65076608	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_65076664_65077912_65078037_65093707_65093816_65102508
transcript_59143.known	chr14	-	3155	4	FSM	ENSG00000125952.20	ENST00000284165.10	3155	4	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_2	109.63880091768	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCGAAGAATTGTCTTGCA	-65093135	True	NA	-5	True	AATAAA	-18	NA	65102488	65075201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_65078037_65093707_65093816_65101545_65101573_65102303
transcript_59146.known	chr14	-	574	4	FSM	ENSG00000125952.20	ENST00000555667.5	574	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	155.833957218002	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAATTAAATGGGTTG	-65093164	True	NA	NA	False	AATAAA	-8	NA	65102517	65077300	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_65077429_65077912_65078037_65093707_65093816_65102303
transcript_59147.known	chr14	-	897	4	FSM	ENSG00000125952.20	ENST00000246163.2	897	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	64.88108781113	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGCAGTACCTCTTTTT	-65093156	True	NA	NA	False	AATAAA	-19	NA	65102509	65083743	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_65084300_65093707_65093816_65101545_65101573_65102303
transcript_59150.known	chr14	-	585	3	FSM	ENSG00000125952.20	ENST00000556443.5	585	3	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_2	71.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTGAGTGTTAGAGCCG	-65093164	True	NA	NA	False	NA	NA	NA	65102517	65077773	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_65078037_65093707_65093816_65102303
transcript_59156.known	chr14	+	5166	11	FSM	ENSG00000033170.17	ENST00000360689.9	5166	11	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_1	16.4039629358274	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCAACTGAGCGGAGGTA	NA	False	NA	7	True	AATAAA	-16	NA	65410591	65744121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_65411994_65455620_65455719_65561336_65561767_65615977_65616094_65616210_65616374_65629491_65629607_65669242_65669481_65721774_65722022_65724146_65724324_65733230_65733382_65742092
transcript_59158.known	chr14	+	4249	11	FSM	ENSG00000033170.17	ENST00000673929.1	4249	11	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	13.5262707351287	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCAACTGAGCGGAGGTA	65412577	True	NA	7	True	AATAAA	-16	NA	65412729	65744121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_65413215_65455620_65455719_65561336_65561767_65615977_65616094_65616210_65616374_65629491_65629607_65669242_65669481_65721774_65722022_65724146_65724324_65733230_65733382_65742092
transcript_59159.known	chr14	+	2858	11	FSM	ENSG00000033170.17	ENST00000674118.1	2858	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	28.5138562807629	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTCACTCTCCATTAG	65412612	False	NA	NA	False	AATACA	-11	NA	65412980	65743028	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_65413215_65455620_65455719_65561336_65561767_65615977_65616094_65616210_65616374_65629491_65629607_65669242_65669481_65721774_65722022_65724146_65724324_65733277_65733382_65742092
transcript_59161.known	chr14	+	2269	10	FSM	ENSG00000033170.17	ENST00000557164.5	2269	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	30.2487628560407	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTATAAGGTTGTCTGT	65411316	True	NA	NA	False	NA	NA	NA	65411873	65742936	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_65411994_65455620_65455719_65615977_65616094_65616210_65616374_65629491_65629607_65669242_65669481_65721774_65722022_65724146_65724324_65733230_65733382_65742092
transcript_59162.known	chr14	+	3559	10	FSM	ENSG00000033170.17	ENST00000394586.6	3559	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	28.1007886186074	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTAAAGTTTCTAGAAT	NA	False	NA	6	True	AATAAA	-14	NA	65411121	65743142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_65411994_65561336_65561767_65615977_65616094_65616210_65616374_65629491_65629607_65669242_65669481_65721774_65722022_65724146_65724324_65733230_65733382_65742092
transcript_59163.nic	chr14	+	3215	10	NIC	ENSG00000033170.17	novel	4249	11	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	28.1007886186074	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTAAAGTTTCTAGAAT	65412670	False	NA	6	True	AATAAA	-14	NA	65412686	65743142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_65413215_65561336_65561767_65615977_65616094_65616210_65616374_65629491_65629607_65669242_65669481_65721774_65722022_65724146_65724324_65733230_65733382_65742092
transcript_59170.nic	chr14	+	1888	8	ISM	ENSG00000033170.17	ENST00000674118.1	2858	11	-293	21053	-42	63	5prime_fragment	FALSE	canonical	3	50	junction_1	14.2270222908839	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAAGAAGCCACCAAGAAG	65412671	False	NA	NA	False	AAAAAG	-4	NA	65412687	65721975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_65413215_65455620_65455719_65561336_65561767_65615977_65616094_65616210_65616374_65629491_65629607_65669242_65669481_65721774
transcript_59172.known	chr14	-	1521	1	FSM	ENSG00000276116.2	ENST00000621019.2	1521	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTAAATGCATGGATGCT	-65412586	False	NA	NA	False	AATAAA	-16	NA	65412690	65411169	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_65411200_65412700
transcript_59174.known	chr14	+	3557	23	FSM	ENSG00000171723.16	ENST00000478722.6	3557	23	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_9	9.20923000882114	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAATGTGTTGGCCTCGTT	66506489	True	NA	23	True	AATAAA	-27	NA	66508146	67181803	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_66508592_66681106_66681186_66776463_66776522_66824473_66824567_66879938_66880034_66916002_66916070_66922665_66922939_66924193_66924293_66965190_66965326_67023632_67023676_67058648_67058787_67088982_67089076_67100855_67100912_67110139_67110260_67111860_67111920_67113017_67113172_67122255_67122378_67143361_67143450_67159414_67159489_67165161_67165227_67168932_67169037_67179577_67179675_67180803
transcript_59178.known	chr14	+	5468	15	FSM	ENSG00000072415.10	ENST00000261681.9	5468	15	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_10	9.13867091662945	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGAACTTGAAAGTTTTC	67240238	True	NA	NA	False	ATTAAA	-39	NA	67241434	67336061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_67241534_67269700_67269784_67279017_67279538_67292510_67292720_67301388_67301467_67301971_67302119_67302409_67302572_67303521_67303600_67312526_67312711_67316831_67316904_67317407_67317480_67320229_67320398_67321056_67321260_67323701_67323813_67332779
transcript_59181.known	chr14	+	5006	15	FSM	ENSG00000072415.10	ENST00000555925.5	5006	15	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	19.3508160456517	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGCAATTTCTCTTGCTA	67240226	True	NA	25	True	AATAAA	-33	NA	67241422	67335819	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_67241534_67269700_67269784_67279249_67279538_67292510_67292720_67301388_67301467_67301971_67302119_67302409_67302572_67303521_67303600_67312526_67312711_67316831_67316904_67317407_67317480_67320229_67320398_67321056_67321260_67323701_67323813_67332779
transcript_59186.nic	chr14	+	1834	11	ISM	ENSG00000072415.10	ENST00000677222.1	3730	13	-149	5454	-78	-5454	5prime_fragment	FALSE	canonical	3	61	junction_10	7.56372923894027	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGGAAAAAGGTTTTAT	67241093	True	NA	NA	False	AATAAA	-3	NA	67241263	67317438	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_67241534_67269700_67269784_67279017_67279538_67292510_67292720_67301388_67301467_67301971_67302119_67302409_67302572_67303521_67303600_67312526_67312711_67316831_67316904_67317407
transcript_59189.known	chr14	-	1599	9	FSM	ENSG00000100554.12	ENST00000216442.12	1599	9	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_4	31.8345331362029	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGGCATTATAATACTTC	-67356359	True	NA	NA	False	AATAAA	-18	NA	67359804	67337871	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_67338763_67340439_67340519_67343371_67343439_67345767_67345872_67347408_67347454_67349036_67349105_67350610_67350691_67352922_67353041_67359657
transcript_59193.nic	chr14	-	792	8	ISM	ENSG00000100554.12	ENST00000216442.12	1599	9	-84	2568	-56	-1885	5prime_fragment	FALSE	canonical	3	321	junction_3	32.4672519468401	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTTGAAATTGGCAGTT	-67356443	True	NA	-4	True	NA	NA	NA	67359888	67340439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_67340519_67343371_67343439_67345767_67345872_67347408_67347454_67349036_67349105_67350610_67350691_67352922_67353041_67359657
transcript_59195.known	chr14	+	4154	8	FSM	ENSG00000134001.15	ENST00000256383.11	4154	8	0	0	0	0	multi-exon	FALSE	canonical	3	1185	junction_3	157.908524281675	551	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATGATACAGACTTTTC	67347894	True	NA	16	True	AATAAA	-18	NA	67360327	67386516	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_67360457_67364766_67365009_67374467_67374548_67376438_67376591_67380658_67380766_67381592_67381691_67382446_67382591_67383314
transcript_59198.known	chr14	-	1513	9	FSM	ENSG00000100558.9	ENST00000216446.9	1513	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.68967934891875	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTCTCTTAACTTCTTT	-67412090	True	NA	1	True	AATAAA	-16	NA	67412165	67386983	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_67387457_67388223_67388303_67390662_67390747_67392325_67392428_67392661_67392850_67393149_67393242_67395401_67395584_67397661_67397827_67412017
transcript_59206.known	chr14	-	594	4	FSM	ENSG00000100564.9	ENST00000558001.1	594	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	42.4970587217516	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGAGATCCTGGCACAC	-67599018	True	NA	NA	False	NA	NA	NA	67600282	67590126	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_67590173_67592634_67592719_67593742_67593948_67600023
transcript_59209.known	chr14	-	1049	4	FSM	ENSG00000100564.9	ENST00000559581.5	1049	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	50.4997249717483	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCCAACACTGTGGGGGA	-67599003	True	NA	NA	False	AAAACA	-32	NA	67600267	67591808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_67592437_67592634_67592719_67593742_67593836_67600023
transcript_59210.known	chr14	+	1911	8	FSM	ENSG00000081181.8	ENST00000261783.4	1911	8	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_5	43.7264222181509	190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTCTGAAATGTTGTTC	67617029	True	NA	10	True	AATAAA	-17	NA	67619919	67651708	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_67620089_67620893_67620967_67642185_67642364_67645642_67645803_67646643_67646739_67646920_67647026_67648046_67648184_67650714
transcript_59215.known	chr14	-	1103	7	FSM	ENSG00000100568.11	ENST00000216456.6	1103	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	617.527237366004	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGCTGTGGGAGGAGGGA	-67665501	True	NA	-125	True	NA	NA	NA	67674610	67651263	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_67651482_67653436_67653499_67656415_67656590_67659730_67659923_67662476_67662536_67663028_67663191_67674374
transcript_59216.known	chr14	-	2539	7	FSM	ENSG00000072042.13	ENST00000381346.9	2539	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	409.604450116885	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAAACACTGTTCATTA	-67675256	True	NA	-19	True	AATAAA	-34	NA	67695764	67676799	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_67678424_67685014_67685205_67690211_67690422_67691139_67691245_67692437_67692594_67692933_67693053_67695629
transcript_59217.known	chr14	-	1926	7	FSM	ENSG00000072042.13	ENST00000553384.5	1926	7	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_5	256.054301966508	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCCTAAAAACAAACAAACAA	-67675246	True	NA	NA	False	NA	NA	NA	67695754	67677363	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_67678424_67685014_67685205_67690211_67690422_67691139_67691245_67692437_67692594_67692972_67693053_67695629
transcript_59221.known	chr14	-	5142	6	FSM	ENSG00000100568.11	ENST00000554659.6	5142	6	0	0	0	0	multi-exon	FALSE	canonical	3	1173	junction_4	89.9497637573329	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCTAAAAGTGTGTTGCC	-67665523	True	NA	NA	False	AGTAAA	-19	NA	67674632	67647084	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_67651482_67653436_67653499_67656415_67656590_67659730_67659923_67662476_67662536_67674374
transcript_59229.known	chr14	-	1064	6	FSM	ENSG00000072042.13	ENST00000428130.6	1064	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	520.566230176334	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTACTACCTAGGAGAAT	-67675225	True	NA	NA	False	NA	NA	NA	67695733	67678033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_67678424_67685014_67685205_67691139_67691245_67692437_67692594_67692933_67693053_67695629
transcript_59239.known	chr14	-	801	2	FSM	ENSG00000072042.13	ENST00000556692.1	801	2	0	0	0	0	multi-exon	FALSE	canonical	3	1040	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGTGGGTCTTGAGGT	-67675285	True	NA	NA	False	NA	NA	NA	67695793	67692415	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_67693053_67695629
transcript_59240.known	chr14	-	9674	42	FSM	ENSG00000072121.17	ENST00000347230.9	9674	42	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_4	8.33768278323973	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGGCTTCATAACTTC	-67814711	True	NA	-14	True	AATAAA	-16	NA	67816590	67746521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_67748640_67751051_67751097_67752343_67752527_67753706_67753767_67754070_67754213_67755050_67755251_67755947_67756146_67761365_67761585_67762202_67762413_67762671_67762820_67766226_67766448_67767703_67767841_67768516_67768549_67769593_67769731_67772046_67772211_67775015_67775115_67775859_67776107_67777558_67777736_67778125_67778249_67780240_67780346_67781332_67781530_67782779_67783526_67784333_67784437_67785058_67785278_67785857_67786023_67786113_67786234_67789334_67789599_67790571_67790774_67793607_67793760_67794170_67794240_67797671_67797756_67798013_67798623_67802078_67802283_67804100_67804265_67805216_67805306_67805453_67805619_67806544_67806676_67807397_67807921_67809199_67809290_67813985_67814065_67815769_67816047_67816533
transcript_59242.known	chr14	+	922	7	FSM	ENSG00000182185.19	ENST00000390683.7	922	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_6	9.14087280053472	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAGTACAGTCTAATTGC	67818050	True	NA	NA	False	AATAAA	-35	NA	67819811	67887326	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_67819854_67823541_67823628_67825463_67825578_67835079_67835197_67865002_67865140_67885868_67885989_67887020
transcript_59246.known	chr14	+	2596	11	FSM	ENSG00000182185.19	ENST00000487270.5	2596	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	20.0688813838739	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAAAATCAGGGGAAAAATA	67818046	True	NA	NA	False	NA	NA	NA	67819807	68595996	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_67819854_67823541_67823628_67825463_67825578_67835079_67835197_67865002_67865140_67885868_67885989_67887020_67887205_68291883_68291981_68411423_68411528_68468171_68468251_68594484
transcript_59248.nic	chr14	+	3752	3	ISM	ENSG00000182185.19	ENST00000557045.5	528	6	291602	25538	-95256	1002	internal_fragment	FALSE	canonical	3	47	junction_1	4	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATGAAAGAACCCCCCT	NA	False	NA	NA	False	AAAAAG	-12	NA	68291880	68471719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_68291981_68411423_68411528_68468171
transcript_59251.known	chr14	-	727	2	FSM	ENSG00000185650.10	ENST00000557086.1	727	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTTGCTGGGTTTCCCA	-68796138	False	NA	NA	False	NA	NA	NA	68796253	68789944	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_68790493_68796074
transcript_59252.known	chr14	-	3017	2	FSM	ENSG00000185650.10	ENST00000439696.3	3017	2	0	0	0	0	multi-exon	FALSE	canonical	3	1360	junction_1	0	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGATGGTGGAGCTGGTT	-68766303	True	NA	75	True	AATAAA	-19	NA	68793067	68787661	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_68790493_68792881
transcript_59257.known	chr14	-	3722	22	FSM	ENSG00000072110.16	ENST00000394419.9	3722	22	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_3	361.852922352392	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACAGCTCTTTGCCTGCTC	-68951376	True	NA	-11	True	ATTAAA	-16	NA	68979302	68874127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_68875018_68877081_68877241_68878457_68878524_68878988_68879070_68879961_68880109_68880809_68880990_68882457_68882593_68882872_68883056_68884167_68884309_68884774_68884884_68885424_68885576_68890138_68890287_68892052_68892284_68893654_68893748_68902476_68902563_68904654_68904737_68909317_68909397_68909954_68910043_68912155_68912243_68921005_68921126_68925557_68925673_68978951
transcript_59258.known	chr14	-	3778	22	FSM	ENSG00000072110.16	ENST00000683267.1	3778	22	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_14	365.9041793704	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATGACAGCTCTTTGCC	-68951418	True	NA	-16	True	ATTAAA	-11	NA	68979344	68874132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_68875018_68877081_68877241_68878988_68879070_68879961_68880109_68880809_68880990_68882457_68882593_68882872_68883056_68884167_68884309_68884774_68884884_68885424_68885576_68890138_68890287_68892052_68892284_68893654_68893748_68900861_68900947_68902476_68902563_68904654_68904737_68909317_68909397_68909954_68910043_68912155_68912243_68921005_68921126_68925557_68925673_68978951
transcript_59271.known	chr14	-	3043	21	FSM	ENSG00000072110.16	ENST00000438964.6	3043	21	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	361.677701828576	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTGCAAAAAAGAAAAAAAAG	-68951336	True	NA	1	True	NA	NA	NA	68979262	68874685	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_68875018_68877081_68877241_68878457_68878524_68879961_68880109_68880809_68880990_68882457_68882593_68882872_68883056_68884167_68884309_68884774_68884884_68885424_68885576_68890138_68890287_68892052_68892284_68893654_68893748_68902476_68902563_68904654_68904737_68909317_68909397_68909954_68910043_68912155_68912243_68921005_68921126_68925557_68925673_68978951
transcript_59273.known	chr14	-	3779	21	FSM	ENSG00000072110.16	ENST00000193403.10	3779	21	0	0	0	0	multi-exon	FALSE	canonical	3	996	junction_10	117.855674449727	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCACACTCCTATGACA	-68979424	False	NA	-26	True	ATTAAA	-1	NA	68979440	68874142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_68875018_68877081_68877241_68878988_68879070_68879961_68880109_68880809_68880990_68882457_68882593_68882872_68883056_68884167_68884309_68884774_68884884_68885424_68885576_68890138_68890287_68892052_68892284_68893654_68893748_68902476_68902563_68904654_68904737_68909317_68909397_68909954_68910043_68912155_68912243_68921005_68921126_68925557_68925673_68978951
transcript_59313.known	chr14	-	4895	20	FSM	ENSG00000072110.16	ENST00000684340.1	4895	20	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	281.291954088458	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATGACAGCTCTTTGCC	-68951418	True	NA	-16	True	ATTAAA	-11	NA	68979344	68874132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_68875018_68877081_68878524_68879961_68880109_68880809_68880990_68882457_68882593_68882872_68883056_68884167_68884309_68884774_68884884_68885424_68885576_68890138_68890287_68892052_68892284_68893654_68893748_68902476_68902563_68904654_68904737_68909317_68909397_68909954_68910043_68912155_68912243_68921005_68921126_68925557_68925673_68978951
transcript_59318.nic	chr14	-	3457	20	NIC	ENSG00000072110.16	novel	3779	21	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	116	junction_2	272.002097922494	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTTTTTTAAGGAAGAGA	-68979358	False	NA	-24	True	ATTAAA	-18	NA	68979374	68874317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_68875018_68877081_68877241_68879961_68880109_68880809_68880990_68882457_68882593_68882872_68883056_68884167_68884309_68884774_68884884_68885424_68885576_68890138_68890287_68892052_68892284_68893654_68893748_68902476_68902563_68904654_68904737_68909317_68909397_68909954_68910043_68912155_68912243_68921005_68921126_68925557_68925673_68978951
transcript_59320.known	chr14	-	5441	20	FSM	ENSG00000072110.16	ENST00000682378.1	5441	20	0	0	0	0	multi-exon	FALSE	canonical	3	996	junction_9	120.65536644312	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATGACAGCTCTTTGCC	-68951418	True	NA	-16	True	ATTAAA	-11	NA	68979344	68874132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_68875018_68877081_68879070_68879961_68880109_68880809_68880990_68882457_68882593_68882872_68883056_68884167_68884309_68884774_68884884_68885424_68885576_68890138_68890287_68892052_68892284_68893654_68893748_68902476_68902563_68904654_68904737_68909317_68909397_68909954_68910043_68912155_68912243_68921005_68921126_68925557_68925673_68978951
transcript_59321.known	chr14	-	3495	20	FSM	ENSG00000072110.16	ENST00000682331.1	3495	20	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	434.185543140921	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATGACAGCTCTTTGCC	-68951418	True	NA	-16	True	ATTAAA	-11	NA	68979344	68874132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_68875018_68877081_68877241_68878457_68878524_68879961_68880109_68880809_68880990_68882457_68882593_68884167_68884309_68884774_68884884_68885424_68885576_68890138_68890287_68892052_68892284_68893654_68893748_68902476_68902563_68904654_68904737_68909317_68909397_68909954_68910043_68912155_68912243_68921005_68921126_68925557_68925673_68978951
transcript_59330.nic	chr14	-	3089	20	NIC	ENSG00000072110.16	novel	3043	21	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	116	junction_2	272.002097922494	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTGCAAAAAAGAAAAAAAAG	-68979358	False	NA	1	True	NA	NA	NA	68979374	68874685	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_68875018_68877081_68877241_68879961_68880109_68880809_68880990_68882457_68882593_68882872_68883056_68884167_68884309_68884774_68884884_68885424_68885576_68890138_68890287_68892052_68892284_68893654_68893748_68902476_68902563_68904654_68904737_68909317_68909397_68909954_68910043_68912155_68912243_68921005_68921126_68925557_68925673_68978951
transcript_59358.known	chr14	-	2245	8	FSM	ENSG00000072110.16	ENST00000683261.1	2245	8	0	0	0	0	multi-exon	FALSE	canonical	3	1100	junction_1	40.0596494019117	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCAGACTCTGTCTCAAAA	-68951418	True	NA	NA	False	NA	NA	NA	68979344	68901281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_68902563_68904654_68904737_68909317_68909397_68909954_68910043_68912155_68912243_68921005_68921126_68925557_68925673_68978951
transcript_59369.known	chr14	-	4803	9	FSM	ENSG00000139990.18	ENST00000554215.5	4803	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	57.7337639514349	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATCACTCAGTGTGTGTTT	-69152588	False	NA	-9	True	ATTAAA	-37	NA	69152599	69051854	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_69055612_69062383_69062512_69075344_69075412_69091673_69091888_69116365_69116496_69118138_69118279_69119193_69119231_69122216_69122361_69152413
transcript_59370.known	chr14	-	2791	9	FSM	ENSG00000139990.18	ENST00000556847.5	2791	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	58.1463670404265	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTAGTGAATACAGAGG	-69152598	False	NA	-65	True	AAAAAG	-32	NA	69152609	69053801	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_69055612_69062383_69062512_69075344_69075412_69091673_69091888_69116365_69116496_69118138_69118279_69119193_69119231_69122216_69122361_69152488
transcript_59371.known	chr14	-	2883	9	FSM	ENSG00000139990.18	ENST00000557386.5	2883	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	55.2538177414014	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAGCCTTACAAAAAAAAAA	-69151463	True	NA	-88	True	ATTAAA	-40	NA	69153003	69053824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_69055612_69062383_69062512_69075344_69075412_69091673_69091888_69116365_69116496_69118138_69118276_69119193_69119231_69122216_69122361_69152764
transcript_59385.known	chr14	+	5708	16	FSM	ENSG00000100626.17	ENST00000337827.8	5708	16	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	5.10772834916745	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCCAAACACTTTGCTAG	69259944	False	NA	NA	False	AATAAA	-21	NA	69259963	69357033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_69260468_69320710_69320869_69324691_69324791_69325336_69325405_69325961_69326028_69328449_69328572_69331463_69331552_69333084_69333170_69333496_69333601_69338650_69338778_69339526_69339620_69341680_69341765_69347039_69347182_69347876_69348003_69352030_69352171_69353331
transcript_59386.known	chr14	+	4108	15	FSM	ENSG00000100626.17	ENST00000448469.8	4108	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	4.84294142362398	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGCACCAGCGCCTTCC	69259880	True	NA	6	True	AATAAA	-18	NA	69260157	69354466	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_69260468_69320710_69320869_69324691_69324791_69325336_69325405_69325961_69326028_69328449_69328572_69331463_69331552_69333084_69333170_69333496_69333601_69338650_69338778_69339526_69339620_69341680_69341765_69347039_69347182_69347876_69348003_69352030
transcript_59388.known	chr14	+	3404	11	FSM	ENSG00000081177.19	ENST00000409014.5	3404	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	64.2953342008578	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTCACTGGATGTAAAT	69189938	True	NA	15	True	AATAAA	-16	NA	69191530	69242356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_69191592_69203916_69204001_69209423_69209804_69210111_69210202_69228815_69229073_69230471_69230599_69234699_69235032_69236045_69236153_69236406_69236543_69237574_69237932_69240883
transcript_59391.nic	chr14	+	3357	10	FSM	ENSG00000081177.19	ENST00000685843.1	5009	10	-8	1660	-8	0	multi-exon	FALSE	canonical	3	96	junction_1	25.4606935015574	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCACTGGATGTAAATGT	NA	False	NA	17	True	AATAAA	-18	NA	69191489	69242358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_69191592_69203916_69204001_69209423_69209804_69228815_69229073_69230471_69230599_69234699_69235032_69236045_69236153_69236406_69236543_69237574_69237932_69240883
transcript_59393.known	chr14	+	2688	10	FSM	ENSG00000081177.19	ENST00000409949.5	2688	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	41.665629616724	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGGAGAAAAAGTTCTTCC	69190173	False	NA	NA	False	GGGGCT	-25	NA	69191765	69241517	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_69192040_69203916_69204001_69209423_69209804_69228815_69229073_69230471_69230599_69234699_69235032_69236045_69236153_69236406_69236543_69237574_69237932_69240883
transcript_59398.known	chr14	+	3252	9	FSM	ENSG00000081177.19	ENST00000409018.7	3252	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	52.8961246217528	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCACTGGATGTAAATGT	69189918	True	NA	17	True	AATAAA	-18	NA	69191510	69242358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_69191592_69209423_69209804_69228815_69229073_69230471_69230599_69234699_69235032_69236045_69236153_69236406_69236543_69237574_69237932_69240883
transcript_5940.known	chr1	-	2922	7	FSM	ENSG00000084628.10	ENST00000373736.7	2922	7	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_6	10.5619863451699	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCCTGTCCTGCCCATTG	-31237075	True	NA	-13	True	ATTAAA	-20	NA	31239887	31179744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_31181713_31181859_31181942_31182529_31182591_31183816_31184015_31185246_31185328_31188049_31188188_31239493
transcript_59403.known	chr14	+	2496	9	FSM	ENSG00000081177.19	ENST00000409242.5	2496	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	53.8677489319908	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTCCTTGTCTAGTGC	69191054	True	NA	NA	False	NA	NA	NA	69191805	69241449	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_69192040_69209423_69209804_69228815_69229073_69230471_69230599_69234699_69235032_69236045_69236153_69236406_69236543_69237574_69237932_69240883
transcript_59405.known	chr14	+	2828	8	FSM	ENSG00000081177.19	ENST00000409675.5	2828	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	60.6104995282272	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCACTGGATGTAAATGT	69189962	True	NA	17	True	AATAAA	-18	NA	69191554	69242358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_69191592_69228815_69229073_69230471_69230599_69234699_69235032_69236045_69236153_69236406_69236543_69237574_69237932_69240883
transcript_59412.known	chr14	+	2377	8	FSM	ENSG00000029364.12	ENST00000555840.5	2377	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_7	43.0969481376061	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTTAATCTGAGTGGCT	69393739	False	NA	25	True	ATTAAA	-14	NA	69398737	69462381	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_69399466_69424093_69424203_69442068_69442267_69453240_69453310_69454811_69454898_69455731_69455867_69458362_69458730_69461696
transcript_59413.known	chr14	+	5399	7	FSM	ENSG00000029364.12	ENST00000336643.10	5399	7	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_3	15.2825245151302	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTGGCTCATTACTTA	69393693	True	NA	34	True	ATTAAA	-23	NA	69398691	69462390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_69399466_69424093_69424203_69442068_69442267_69453240_69453310_69454811_69454898_69455731_69455867_69458362
transcript_59416.known	chr14	+	2065	7	FSM	ENSG00000029364.12	ENST00000556605.5	2065	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	41.1042036239063	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGAGTGGCTCATTACT	69393691	True	NA	32	True	ATTAAA	-21	NA	69398689	69462388	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_69399466_69424093_69424203_69442068_69442267_69453240_69453310_69454811_69454898_69455731_69455867_69461696
transcript_59420.known	chr14	+	855	6	FSM	ENSG00000029364.12	ENST00000557046.1	855	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	49.5378643060033	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTCAAGGTCCAGCCTTG	69399357	False	NA	NA	False	NA	NA	NA	69399369	69458593	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_69399466_69424093_69424203_69442068_69442267_69454811_69454898_69455731_69455867_69458362
transcript_59421.known	chr14	+	5192	6	FSM	ENSG00000029364.12	ENST00000031146.8	5192	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	49.4246901861812	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTTAATCTGAGTGGCT	69393693	True	NA	25	True	ATTAAA	-14	NA	69398691	69462381	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_69399466_69424093_69424203_69453240_69453310_69454811_69454898_69455731_69455867_69458362
transcript_59432.known	chr14	-	791	4	FSM	ENSG00000100632.11	ENST00000557016.6	791	4	0	0	0	0	multi-exon	FALSE	canonical	3	2505	junction_1	204.764905847332	2331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTCCCTGAGTGCTTTT	-69324749	True	NA	-12	True	AATAAA	-20	NA	69398299	69380127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_69380641_69386962_69387084_69394824_69394913_69398230
transcript_59433.known	chr14	-	668	3	FSM	ENSG00000100632.11	ENST00000216520.6	668	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	1244.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATATTTTCTCCCTGAG	-69324721	True	NA	-19	True	AATAAA	-13	NA	69398271	69380134	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_69380641_69386962_69387084_69398230
transcript_59435.known	chr14	+	4891	13	FSM	ENSG00000175985.10	ENST00000322564.9	4891	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_11	2.40947204913349	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTATGTGGTGTGGTC	69484582	True	NA	NA	False	ATTAAA	-21	NA	69484727	69531551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_69485115_69500114_69500209_69500576_69500667_69500870_69500948_69501733_69501826_69502826_69502880_69522282_69522378_69524228_69524323_69525943_69526123_69526696_69526830_69527187_69527333_69527782_69527933_69528249
transcript_59436.known	chr14	-	4182	2	FSM	ENSG00000267909.3	ENST00000599174.3	4182	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCCCTGAAATGGCTGAT	-69574613	True	NA	NA	False	ATTAAA	-31	NA	69574871	69569798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_69573651_69574541
transcript_59437.known	chr14	+	5390	6	FSM	ENSG00000100647.8	ENST00000342745.5	5390	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	4.44522215417857	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGGAGATGTGATCCTT	69611043	True	NA	9	True	ATTAAA	-22	NA	69611595	69715144	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_69611829_69658512_69658714_69703394_69703593_69704603_69704743_69708676_69709105_69710953
transcript_5944.known	chr1	-	1615	10	FSM	ENSG00000060688.13	ENST00000263694.9	1615	10	0	0	0	0	multi-exon	FALSE	canonical	3	1358	junction_3	116.998364449896	673	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGCTCACTTGTTTTT	-31286230	True	NA	-1	True	AATACA	-19	NA	31296788	31259567	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_31260122_31261528_31261633_31267870_31267933_31269157_31269241_31271378_31271500_31281373_31281497_31289253_31289420_31291912_31292007_31293218_31293349_31296610
transcript_59442.nic	chr14	+	1176	9	NIC	ENSG00000100650.16	novel	1496	8	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_8	523.370909943417	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGTCTGTTTGTCTGA	69727476	True	NA	20	True	AATAAA	-15	NA	69767089	69772005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_69767256_69768137_69768283_69768603_69768675_69768797_69768897_69769181_69769252_69770466_69770541_69770994_69771106_69771193_69771545_69771916
transcript_59444.known	chr14	+	2057	8	FSM	ENSG00000100650.16	ENST00000555547.5	2057	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	574.169675554649	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTTTTGATAAGCCTTC	69727572	True	NA	0	True	NA	NA	NA	69767185	69771654	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_69767256_69768137_69768283_69768603_69768675_69768797_69768897_69769181_69769252_69769510_69770541_69770994_69771106_69771193
transcript_59445.known	chr14	+	1496	8	FSM	ENSG00000100650.16	ENST00000557154.6	1496	8	0	0	0	0	multi-exon	FALSE	canonical	3	1228	junction_1	168.880950702571	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGTCTGTTTGTCTGA	69727528	True	NA	20	True	AATAAA	-15	NA	69767141	69772005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_69767256_69768137_69768283_69768603_69768675_69768797_69768897_69769181_69769252_69770466_69770541_69770994_69771106_69771193
transcript_59449.known	chr14	+	1638	8	FSM	ENSG00000100650.16	ENST00000394366.6	1638	8	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	525.176122061612	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTTATTGATAATAAAAT	69727479	True	NA	5	True	NA	NA	NA	69767092	69771973	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_69767381_69768137_69768283_69768603_69768675_69768797_69768897_69769181_69769252_69770466_69770541_69770994_69771106_69771193
transcript_59451.known	chr14	+	2815	9	FSM	ENSG00000100650.16	ENST00000553521.5	2815	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	542.005246745823	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTTGTCTGTTTGTCTG	NA	False	NA	19	True	AATAAA	-14	NA	69726899	69772004	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_69727192_69766113_69767256_69768137_69768283_69768603_69768675_69768797_69768897_69769181_69769252_69770466_69770541_69770994_69771106_69771193
transcript_59453.nic	chr14	+	2762	7	NIC	ENSG00000100650.16	novel	2815	9	NA	NA	-3	0	intron_retention	FALSE	canonical	3	1228	junction_1	178.99348219046	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTTGTCTGTTTGTCTG	69727476	True	NA	19	True	AATAAA	-14	NA	69767089	69772004	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_69767256_69768137_69768283_69768603_69768675_69768797_69768897_69769181_69770541_69770994_69771106_69771193
transcript_59458.known	chr14	+	3044	6	FSM	ENSG00000100650.16	ENST00000554465.5	3044	6	0	0	0	0	multi-exon	FALSE	canonical	3	1228	junction_1	193.226913239331	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTTGTCTGTTTGTCTG	69727479	True	NA	19	True	AATAAA	-14	NA	69767092	69772004	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_69767256_69768137_69768283_69768603_69768675_69768797_69770541_69770994_69771106_69771193
transcript_59463.known	chr14	+	644	4	FSM	ENSG00000100650.16	ENST00000556647.1	644	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	713.967475138438	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGTCTGTTTGTCTGA	69770434	False	NA	20	True	AATAAA	-15	NA	69770447	69772005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_69770541_69770994_69771106_69771193_69771545_69771916
transcript_59464.known	chr14	-	801	1	FSM	ENSG00000242071.3	ENST00000477943.1	801	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTACACTGTTGAGTTTTC	-69885655	True	NA	NA	False	AAAAAG	-37	NA	69886140	69885339	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_69885300_69886100
transcript_59465.known	chr14	-	5133	7	FSM	ENSG00000100678.19	ENST00000356921.7	5133	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.70782512765993	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGCTTCTACCTGTGTTT	-70188930	True	NA	1	True	AATAAA	-27	NA	70188951	70044214	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_70046324_70048766_70049043_70051007_70051108_70051989_70052115_70060835_70060940_70166638_70168485_70188378
transcript_59466.known	chr14	-	929	6	FSM	ENSG00000258644.6	ENST00000621525.4	929	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	1154.53945796582	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACGTATTCCACTCTCCA	-70412376	True	NA	-27	True	AATAAA	-28	NA	70417074	70326063	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_70326450_70329173_70329237_70342657_70342730_70375675_70375772_70388469_70388607_70416899
transcript_59474.nnic	chr14	-	2617	5	NNC	ENSG00000213463.5	novel	7057	4	NA	NA	-7	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	62.4519815538306	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAATCTTTTTTCACCTTA	-70412399	True	NA	-19	True	AATAAA	-19	NA	70417097	70366500	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_-_70367322_70371766_70373132_70375675_70375772_70388469_70388607_70416899
transcript_59477.known	chr14	-	1669	4	FSM	ENSG00000133983.16	ENST00000389912.7	1669	4	0	0	0	0	multi-exon	FALSE	canonical	3	2297	junction_3	72.6008876590975	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTAGTGATAATTTGTG	-70339999	True	NA	-10	True	AATAAA	-17	NA	70359683	70325080	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_70326450_70329173_70329237_70342657_70342730_70359518
transcript_59482.known	chr14	-	7057	4	FSM	ENSG00000213463.5	ENST00000256366.6	7057	4	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_2	15.9234278833282	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATCTTTTTTCACCTTATT	-70412392	True	NA	-17	True	AATAAA	-21	NA	70417090	70366498	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_70373132_70375675_70375772_70388469_70388607_70416899
transcript_59488.known	chr14	-	627	3	FSM	ENSG00000133983.16	ENST00000557612.5	627	3	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_2	1080	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTCACGTATTCCACTC	-70340016	True	NA	-31	True	AATAAA	-24	NA	70359700	70326067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_70326450_70329173_70329237_70359518
transcript_59491.known	chr14	-	902	3	FSM	ENSG00000213463.5	ENST00000554216.1	902	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	60.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATACACATACGTATGCA	-70412363	True	NA	-72	True	AATACA	-1	NA	70417061	70372487	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_70373132_70375675_70375772_70416899
transcript_59498.known	chr14	-	975	9	FSM	ENSG00000133997.12	ENST00000554963.5	975	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	71.1089612847776	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGATTGTTGTACTTTG	-70596389	True	NA	-4	True	AATAAA	-16	NA	70600643	70581256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_70581489_70584816_70584944_70585755_70585784_70591265_70591382_70592879_70592989_70593295_70593379_70596610_70596703_70597617_70597778_70600615
transcript_59502.known	chr14	-	2351	8	FSM	ENSG00000133997.12	ENST00000256379.10	2351	8	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_2	21.266050361061	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACAAAGAATTCCTATATA	-70596401	True	NA	NA	False	NA	NA	NA	70600655	70583220	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_70584944_70585755_70585784_70591265_70591382_70592879_70592989_70593295_70593379_70596610_70596703_70597617_70597778_70600615
transcript_59505.known	chr14	-	1093	4	FSM	ENSG00000133997.12	ENST00000554870.5	1093	4	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_3	15.7973274814304	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGTGGATCACCTGAGC	-70596401	True	NA	NA	False	NA	NA	NA	70600655	70592577	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_70593379_70596610_70596703_70597617_70597778_70600615
transcript_59506.known	chr14	-	689	3	FSM	ENSG00000133997.12	ENST00000556423.1	689	3	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGTTGGTTGCTTGGACA	-70596399	True	NA	NA	False	NA	NA	NA	70600653	70596211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_70596703_70597617_70597778_70600615
transcript_59507.known	chr14	-	862	5	FSM	ENSG00000133997.12	ENST00000556495.5	862	5	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_4	23.2217570394662	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	-70596410	True	NA	NA	False	NA	NA	NA	70600664	70592510	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_70592989_70593295_70593379_70596610_70596703_70597617_70597778_70600615
transcript_59508.known	chr14	+	5094	3	FSM	ENSG00000133985.3	ENST00000256367.3	5094	3	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_2	6	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTTCCTCTGTTGCCAGC	70639316	True	NA	20	True	CATAAA	-20	NA	70641915	70675366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_70642536_70667563_70667747_70671075
transcript_59512.known	chr14	-	11511	12	FSM	ENSG00000006432.16	ENST00000554752.7	11511	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	24.451334699665	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGTTTGTTGTGGTTC	-70808654	True	NA	-1	True	AATAAA	-17	NA	70809513	70722525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_70730865_70732538_70733343_70734385_70734499_70735960_70736030_70738244_70738399_70740041_70740165_70742350_70742592_70748828_70749005_70749932_70750082_70761001_70761183_70800666_70801081_70808765
transcript_59515.known	chr14	-	4025	11	FSM	ENSG00000006432.16	ENST00000381250.8	4025	11	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	6.64906008395172	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCGCTGTCCCCCAACA	-70808647	True	NA	NA	False	NA	NA	NA	70809506	70729935	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_70730865_70732538_70733343_70734385_70734499_70738244_70738399_70740041_70740165_70742350_70742592_70748828_70749005_70749932_70750082_70761001_70761183_70800666_70801081_70808765
transcript_59528.known	chr14	+	963	2	FSM	ENSG00000259153.3	ENST00000653562.2	1019	2	49	7	49	-7	multi-exon	FALSE	canonical	3	49	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTATATATATAATACATT	70809356	True	NA	NA	False	AATAAA	-17	NA	70809990	70815389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_70810675_70815110
transcript_59530.known	chr14	+	1659	2	FSM	ENSG00000259153.3	ENST00000661317.1	1659	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTACAGTATAATGATAA	70809732	False	NA	NA	False	AAAACA	-43	NA	70809890	70815994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_70810666_70815110
transcript_59532.known	chr14	+	368	2	ISM	ENSG00000259153.3	ENST00000554032.2	537	3	305	5	263	-5	3prime_fragment	FALSE	canonical	3	28	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATATATATAATACATTCC	70810180	False	NA	NA	False	AATAAA	-19	NA	70810204	70815391	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_70810292_70815110
transcript_59534.known	chr14	+	284	2	FSM	ENSG00000275630.1	ENST00000622856.1	284	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGGCGTCTGATGATAGTT	70821883	True	NA	5	True	CATAAA	-23	NA	70822003	70823984	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_70822123_70823819
transcript_5955.known	chr1	+	1705	9	FSM	ENSG00000121766.16	ENST00000546109.5	1705	9	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	246.86927208545	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATAATCCTTCTTCCTGG	31288392	True	NA	48	True	ACTAAA	-40	NA	31296981	31364953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_31297076_31310043_31310165_31318166_31318237_31319108_31319167_31337174_31337276_31338956_31339049_31346639_31346741_31348828_31348975_31364031
transcript_59550.known	chr14	+	7952	24	FSM	ENSG00000197555.10	ENST00000381232.8	7952	24	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	52.1143137854011	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTCGATAGAGAATTACT	71317133	True	NA	6	True	AATAAA	-18	NA	71320475	71741209	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_71320504_71321121_71321182_71512742_71512846_71529311_71529371_71587570_71589371_71618756_71618888_71624047_71624237_71650334_71650510_71658332_71658437_71661309_71661468_71671118_71671693_71672347_71672623_71685361_71685632_71698980_71699128_71702380_71702506_71705221_71705341_71709221_71709665_71723646_71723887_71724669_71724836_71730054_71730302_71733665_71733813_71735276_71735392_71738240_71738326_71739017
transcript_59563.nic	chr14	+	6518	23	ISM	ENSG00000197555.10	ENST00000381232.8	7952	24	244	1808	205	0	3prime_fragment	FALSE	canonical	3	118	junction_1	46.1084779139064	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTGAATGTCTTTATT	71320619	False	NA	13	True	AATAAA	-34	NA	71320719	71739401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_71321182_71512742_71512846_71529311_71529371_71587570_71589371_71618756_71618888_71624047_71624237_71650334_71650510_71658332_71658437_71661309_71661468_71671118_71671693_71672347_71672623_71685361_71685632_71698980_71699128_71702380_71702506_71705221_71705341_71709221_71709665_71723646_71723887_71724669_71724836_71730054_71730302_71733665_71733813_71735276_71735392_71738240_71738326_71739017
transcript_5958.known	chr1	+	761	8	FSM	ENSG00000121766.16	ENST00000479629.5	761	8	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	258.776714089777	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGGTGAATGCTACTTT	31288408	True	NA	NA	False	AAAAAG	-2	NA	31296997	31348968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_31297076_31310043_31310165_31318166_31318237_31319108_31319167_31337174_31337276_31338956_31339049_31346639_31346741_31348828
transcript_59582.nnic	chr14	+	2184	6	ISM	ENSG00000197555.10	ENST00000381232.8	7952	24	-74	122393	-47	30847	5prime_fragment	FALSE	canonical	3	87	junction_1	47.4232010728926	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAAAAACCAGATGAAATG	71317059	True	NA	NA	False	GGGGCT	-38	NA	71320401	71618816	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_71320504_71321121_71321182_71512742_71512846_71529311_71529371_71587570_71589371_71618756
transcript_59594.nic	chr14	+	2434	14	NIC	ENSG00000119599.17	novel	2374	14	NA	NA	-3	0	intron_retention	FALSE	canonical	3	31	junction_9	12.7872902876023	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATGGTGTGACATGCAC	72924401	True	NA	11	True	AATAAA	-12	NA	72926447	72959644	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_72926544_72937970_72938071_72939801_72939903_72940219_72940378_72941744_72941825_72942993_72943097_72945883_72946028_72947141_72947192_72951797_72951878_72954160_72954263_72954385_72954484_72955522_72955697_72956385_72956501_72958611
transcript_59595.known	chr14	+	2474	14	FSM	ENSG00000119599.17	ENST00000358377.7	2474	14	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_9	11.800611758287	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACCAGCTTTCATAGCCT	72924417	True	NA	70	True	NA	NA	NA	72926463	72959703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_72926544_72937970_72938071_72939801_72939903_72940219_72940378_72941744_72941825_72942993_72943097_72945883_72946028_72947141_72947192_72951797_72951878_72954163_72954263_72954385_72954484_72955522_72955697_72956385_72956501_72958611
transcript_59597.known	chr14	+	1872	14	FSM	ENSG00000119599.17	ENST00000509320.5	1872	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	25.7906914082118	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAAAAACGAAAAGCTTCT	72924404	True	NA	NA	False	AAAAAG	-24	NA	72926450	72959121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_72926544_72937970_72938071_72939801_72939903_72940251_72940378_72941744_72941825_72942993_72943097_72945887_72946028_72947141_72947192_72951797_72951878_72954160_72954263_72954385_72954484_72955522_72955697_72956385_72956501_72958611
transcript_5960.known	chr1	+	1568	8	FSM	ENSG00000121766.16	ENST00000344147.10	1568	8	0	0	0	0	multi-exon	FALSE	canonical	3	493	junction_1	66.7006715995929	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTGAGTTATTTTTCCT	31288442	True	NA	31	True	ACTAAA	-23	NA	31297031	31364936	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_31297076_31310043_31310165_31319108_31319167_31337174_31337276_31338956_31339049_31346639_31346741_31348828_31348975_31364031
transcript_59607.known	chr14	-	319	1	FSM	ENSG00000176043.5	ENST00000488095.1	319	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCCTCCCCTGCCCTCTT	NA	False	NA	NA	False	AAGAAA	-7	NA	72929930	72929611	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_72929600_72929900
transcript_59608.known	chr14	+	2374	14	FSM	ENSG00000119599.17	ENST00000555042.5	2374	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	21.5227965011699	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATGGTGTGACATGCAC	72924440	True	NA	11	True	AATAAA	-12	NA	72926486	72959644	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_72926544_72937970_72938071_72939801_72939903_72940219_72940378_72941744_72941825_72942993_72943097_72945883_72946028_72947141_72947192_72951797_72951878_72954160_72954263_72954385_72954463_72955522_72955697_72956385_72956501_72958611
transcript_59610.known	chr14	-	4380	12	FSM	ENSG00000165861.14	ENST00000556143.6	4380	12	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_10	9.78360916351746	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGACTGTGCTGGCTCTT	-73026134	True	NA	-11	True	CATAAA	-15	NA	73027106	72969450	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_72971115_72974079_72974194_72974778_72974960_72975550_72975722_72977926_72978045_72978136_72978235_72978860_72978970_72981788_72981896_72993142_72993358_72997810_72998316_73024025_73024943_73026925
transcript_59611.known	chr14	-	4362	12	FSM	ENSG00000165861.14	ENST00000318876.9	4362	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	19.2795871153623	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCGACTGTGCTGGCTCT	-73026159	True	NA	-12	True	CATAAA	-14	NA	73027131	72969451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_72971115_72974079_72974194_72974778_72974960_72975550_72975722_72977926_72978003_72978136_72978235_72978860_72978970_72981788_72981896_72993142_72993358_72997810_72998316_73024025_73024943_73026925
transcript_59629.nic	chr14	+	1513	11	ISM	ENSG00000119707.14	ENST00000261973.12	6813	19	-36	17905	-34	4815	5prime_fragment	FALSE	canonical	3	228	junction_9	55.4855837132493	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGGACCGAGAAGAAGATGA	73058484	False	NA	-36	True	AAAAAG	-9	NA	73058497	73105994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914_73097101_73099379_73099434_73099666_73099751_73103191_73103479_73105858
transcript_59639.nic	chr14	+	4018	10	ISM	ENSG00000119707.14	ENST00000526754.5	1567	11	-51	-2049	-34	2049	intron_retention	FALSE	canonical	3	86	junction_9	89.7601742917698	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAGGAAATTGAGAAAGAA	73058484	False	NA	5	True	AAAAAG	-11	NA	73058497	73103228	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914_73097101_73099379_73099434_73099666_73099751_73100300
transcript_59640.nic	chr14	+	4124	10	ISM	ENSG00000119707.14	ENST00000526754.5	1567	11	-51	-2155	-34	2155	intron_retention	FALSE	canonical	3	86	junction_9	89.7601742917698	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAAAGAACGGGAGCGGG	73058484	False	NA	44	True	NA	NA	NA	73058497	73103334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914_73097101_73099379_73099434_73099666_73099751_73100300
transcript_59642.nic	chr14	+	1127	10	ISM	ENSG00000119707.14	ENST00000261973.12	6813	19	-36	20671	-34	2049	5prime_fragment	FALSE	canonical	3	228	junction_9	53.6168390722426	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAGGAAATTGAGAAAGAA	73058484	False	NA	5	True	AAAAAG	-11	NA	73058497	73103228	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914_73097101_73099379_73099434_73099666_73099751_73103191
transcript_59643.nic	chr14	+	1233	10	ISM	ENSG00000119707.14	ENST00000261973.12	6813	19	-36	20565	-34	2155	5prime_fragment	FALSE	canonical	3	228	junction_9	53.6168390722426	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAAAGAACGGGAGCGGG	73058484	False	NA	44	True	NA	NA	NA	73058497	73103334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914_73097101_73099379_73099434_73099666_73099751_73103191
transcript_59644.nic	chr14	+	1377	10	ISM	ENSG00000119707.14	ENST00000261973.12	6813	19	-36	20421	-34	2299	5prime_fragment	FALSE	canonical	3	228	junction_9	53.6168390722426	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGCTTTACAGAAGTTA	73058484	False	NA	13	True	NA	NA	NA	73058497	73103478	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914_73097101_73099379_73099434_73099666_73099751_73103191
transcript_59648.known	chr14	+	2470	9	FSM	ENSG00000119707.14	ENST00000525321.5	2470	9	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_6	42.3844016119138	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAACAGTTGTTTTTTAT	73050994	True	NA	NA	False	AATAAA	-20	NA	73058546	73101179	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914_73097101_73099379_73099434_73099666
transcript_5965.known	chr1	+	1730	8	FSM	ENSG00000121766.16	ENST00000373714.5	1730	8	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	210.135621901278	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTGAGTTATTTTTCCT	31288418	True	NA	31	True	ACTAAA	-23	NA	31297007	31364936	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_31297214_31310043_31310165_31319108_31319167_31337174_31337276_31338956_31339049_31346639_31346741_31348828_31348975_31364031
transcript_59652.nic	chr14	+	825	7	ISM	ENSG00000119707.14	ENST00000525321.5	2470	9	-49	4206	-34	-127	5prime_fragment	FALSE	canonical	3	262	junction_6	45.3679402221437	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAGAGATCAGATGATTA	73058484	False	NA	-88	True	AAGAAA	-5	NA	73058497	73096973	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914
transcript_59653.nic	chr14	+	952	7	ISM	ENSG00000119707.14	ENST00000525321.5	2470	9	-49	4079	-34	0	5prime_fragment	FALSE	canonical	3	262	junction_6	45.3679402221437	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTGTTCTGACAACAAC	73058484	False	NA	39	True	NA	NA	NA	73058497	73097100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914
transcript_59654.nic	chr14	+	742	6	ISM	ENSG00000119707.14	ENST00000525321.5	2470	9	-49	13042	-34	4586	5prime_fragment	FALSE	canonical	3	319	junction_5	31.4795171500454	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAGAAGAAAGCTTCTAA	73058484	False	NA	NA	False	NA	NA	NA	73058497	73088137	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000
transcript_59660.known	chr14	+	2776	12	FSM	ENSG00000080815.19	ENST00000357710.8	2776	12	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_3	32.4218067621009	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCTGTCCTGGTATTTT	73131744	True	NA	12	True	ATTAAA	-25	NA	73136446	73220401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73136584_73147794_73147877_73147966_73148095_73170796_73171048_73173565_73173708_73186852_73186921_73192643_73192865_73198030_73198130_73206385_73206473_73211768_73211943_73217125_73217245_73219133
transcript_59661.known	chr14	+	6018	12	FSM	ENSG00000080815.19	ENST00000324501.10	6018	12	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_3	44.2225775327079	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCTAGTGTTTTTTAC	73131804	True	NA	7	True	AATAAA	-16	NA	73136506	73223691	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73136584_73147794_73147877_73147966_73148107_73170796_73171048_73173565_73173708_73186852_73186921_73192643_73192865_73198030_73198130_73206385_73206473_73211768_73211943_73217125_73217245_73219133
transcript_59665.known	chr14	+	3046	12	FSM	ENSG00000080815.19	ENST00000394164.5	3046	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	80.1930521917872	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCTGTCCTGGTATTTT	73136787	False	NA	12	True	ATTAAA	-25	NA	73136816	73220401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73137224_73147794_73147877_73147966_73148095_73170796_73171048_73173565_73173708_73186852_73186921_73192643_73192865_73198030_73198130_73206385_73206473_73211768_73211943_73217125_73217245_73219133
transcript_5967.nic	chr1	+	732	7	ISM	ENSG00000121766.16	ENST00000344147.10	1568	8	-75	15968	-25	0	5prime_fragment	FALSE	canonical	3	493	junction_1	72.0431969183921	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGGTGAATGCTACTTT	NA	False	NA	NA	False	AAAAAG	-2	NA	31296956	31348968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_31297076_31310043_31310165_31319108_31319167_31337174_31337276_31338956_31339049_31346639_31346741_31348828
transcript_59670.known	chr14	+	1249	5	FSM	ENSG00000080815.19	ENST00000394157.7	1249	5	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_3	62.4794966368968	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCACAATCTAAGTGGGTT	73131744	True	NA	NA	False	AATAAA	-14	NA	73136446	73174204	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73136584_73147794_73147877_73147966_73148107_73170796_73171048_73173565
transcript_59671.known	chr14	+	5889	27	FSM	ENSG00000100767.17	ENST00000644200.2	5889	27	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_19	6.33075053740581	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCCAGTTTAATTAAACCA	73237055	True	NA	11	True	AATAAA	-17	NA	73237505	73274623	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73237593_73239772_73239833_73244643_73244760_73245635_73245697_73246072_73246176_73249983_73250115_73250906_73251031_73251485_73251567_73251663_73251837_73252017_73252142_73252648_73252776_73253753_73253962_73254512_73254696_73254876_73255019_73258978_73259060_73259268_73259546_73260708_73260830_73261155_73261295_73262349_73262828_73263644_73263783_73264210_73264336_73264587_73264727_73265369_73265508_73266500_73266629_73266722_73266832_73268556_73268724_73272494
transcript_59673.known	chr14	-	3050	2	FSM	ENSG00000258376.2	ENST00000554614.2	3050	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGATCAAGTTTCTATTT	-73245841	True	NA	NA	False	AATGAA	-18	NA	73245979	73242650	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_73245245_73245523
transcript_59677.known	chr14	-	3604	13	FSM	ENSG00000133961.21	ENST00000555238.6	3604	13	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	65.147428959246	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGCCCATGAAGGGCT	-73452301	True	NA	-13	True	AATAAA	-15	NA	73458546	73275215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_73277294_73279280_73279425_73282358_73282506_73284080_73284375_73287109_73287315_73292733_73292875_73297210_73297286_73316389_73316423_73323129_73323205_73355625_73355767_73366896_73366982_73409936_73410069_73458492
transcript_5968.known	chr1	+	1489	7	FSM	ENSG00000121766.16	ENST00000618216.4	1489	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	229.40460375115	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATAATCCTTCTTCCTGG	31288392	True	NA	48	True	ACTAAA	-40	NA	31296981	31364953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_31297076_31310043_31310165_31319108_31319167_31337174_31337276_31338956_31339049_31346639_31346741_31364031
transcript_59684.nic	chr14	-	3567	12	NIC	ENSG00000133961.21	novel	3604	13	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	126	junction_10	74.5037577398306	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGCCCATGAAGGGCT	-73452349	True	NA	-13	True	AATAAA	-15	NA	73458594	73275215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_73277294_73279280_73279425_73282358_73282506_73284080_73284375_73287109_73287315_73292733_73292875_73297210_73297286_73316389_73316423_73323129_73323205_73355625_73355767_73409936_73410069_73458492
transcript_59685.known	chr14	-	3547	12	FSM	ENSG00000133961.21	ENST00000557597.5	3547	12	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_7	78.5552392895261	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGCCCATGAAGGGCT	-73452277	True	NA	-13	True	AATAAA	-15	NA	73458522	73275215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_73277294_73279280_73279425_73282358_73282506_73284080_73284375_73287109_73287315_73292733_73292875_73297210_73297286_73323129_73323205_73355625_73355767_73366896_73366982_73409936_73410069_73458492
transcript_59689.known	chr14	-	3037	12	FSM	ENSG00000133961.21	ENST00000555394.5	3037	12	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	60.5427244811737	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGGAATTCTAATGTCAT	-73452335	True	NA	1	True	AATAAA	-33	NA	73458580	73275672	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_73277294_73282358_73282506_73284080_73284375_73287109_73287315_73292733_73292875_73297210_73297286_73316389_73316423_73323129_73323205_73355625_73355767_73366896_73366982_73409936_73410069_73458492
transcript_59691.nic	chr14	-	3108	12	NIC	ENSG00000133961.21	novel	3604	13	NA	NA	-14	-2	combination_of_known_junctions	FALSE	canonical	3	126	junction_10	74.5037577398306	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGATGGAATTCTAATGTC	-73452349	True	NA	-1	True	AATAAA	-31	NA	73458594	73275674	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_73277294_73279280_73279425_73282358_73282506_73284080_73284375_73287109_73287315_73292733_73292875_73297210_73297286_73316389_73316423_73323129_73323205_73355625_73355767_73409936_73410069_73458492
transcript_5970.known	chr1	+	1534	7	FSM	ENSG00000121766.16	ENST00000616393.4	1534	7	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	225.216500776968	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATAATCCTTCTTCCTGG	31288392	True	NA	48	True	ACTAAA	-40	NA	31296981	31364953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_31297076_31310043_31310165_31319108_31319167_31338956_31339049_31346639_31346741_31348828_31348975_31364031
transcript_59701.nic	chr14	-	3534	11	NIC	ENSG00000133961.21	novel	3604	13	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	99	junction_7	87.8268751578923	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGCCCATGAAGGGCT	-73452349	True	NA	-13	True	AATAAA	-15	NA	73458594	73275215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_73277294_73279280_73279425_73282358_73282506_73284080_73284375_73287109_73287315_73292733_73292875_73297210_73297286_73323129_73323205_73355625_73355767_73409936_73410069_73458492
transcript_59702.nic	chr14	-	3423	11	NIC	ENSG00000133961.21	novel	3604	13	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	126	junction_9	71.608728518247	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGCCCATGAAGGGCT	-73452349	True	NA	-13	True	AATAAA	-15	NA	73458594	73275215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_73277294_73282358_73282506_73284080_73284375_73287109_73287315_73292733_73292875_73297210_73297286_73316389_73316423_73323129_73323205_73355625_73355767_73409936_73410069_73458492
transcript_59703.known	chr14	-	3607	11	FSM	ENSG00000133961.21	ENST00000554546.5	3607	11	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_6	76.6456782865153	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAGTGACTAGAAAAATAC	NA	False	NA	96	True	NA	NA	NA	73458617	73275106	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_73277294_73282358_73282506_73284080_73284375_73287109_73287315_73292733_73292875_73297210_73297286_73323129_73323205_73355625_73355767_73366896_73366982_73409936_73410069_73458492
transcript_59732.known	chr14	-	1740	7	FSM	ENSG00000133961.21	ENST00000554315.5	1740	7	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_3	96.0115733764541	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGCCATATTTGGTGGTG	-73452301	True	NA	NA	False	NA	NA	NA	73458546	73286192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_73287315_73292733_73292875_73297210_73297286_73323129_73323205_73355625_73355767_73409936_73410069_73458492
transcript_59735.known	chr14	-	847	5	FSM	ENSG00000133961.21	ENST00000557774.5	847	5	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_2	69.6527099257452	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAGGTATAAATTATTAG	-73452332	True	NA	NA	False	AATAAA	-41	NA	73458577	73322800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_73323205_73355625_73355767_73366896_73366982_73409936_73410069_73458492
transcript_59741.known	chr14	+	1686	3	FSM	ENSG00000184227.8	ENST00000311148.9	1686	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	1	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGAGTTTTTAAGATTTT	73537102	True	NA	6	True	ATTAAA	-17	NA	73537142	73543796	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73537879_73541492_73541696_73543049
transcript_59742.known	chr14	+	1553	3	FSM	ENSG00000119673.16	ENST00000613168.1	1553	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	30.5	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTTTTAAGATTTTTAT	73568120	True	NA	17	True	ATTAAA	-20	NA	73569284	73575658	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73569884_73573387_73573591_73574907
transcript_59743.known	chr14	+	1465	3	FSM	ENSG00000177465.5	ENST00000326303.5	1465	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	1	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTATTTTACGTAACTT	73591709	True	NA	6	True	ATTAAA	-20	NA	73591872	73595766	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73592417_73593701_73593905_73595048
transcript_59746.known	chr14	-	629	2	FSM	ENSG00000258603.5	ENST00000555011.3	1303	2	658	16	-56	-16	multi-exon	FALSE	canonical	2	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTGACAGTCTCAC	-73633654	False	124	NA	False	ATTAAA	-8	NA	73633778	73616699	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_73617211_73633660
transcript_59747.known	chr14	+	2462	1	FSM	ENSG00000170468.8	ENST00000304061.8	2462	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	425	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTTCCTAAGGCTAGAT	73488476	True	NA	23	True	ATTAAA	-16	NA	73490932	73493394	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73490900_73493400
transcript_59748.known	chr14	+	632	9	FSM	ENSG00000119661.15	ENST00000554871.5	632	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	21.5315901642215	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACGCTTTCCACTGTGT	73643779	True	NA	NA	False	ATTAAA	-25	NA	73645026	73695942	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73645043_73653169_73653216_73654846_73654886_73658846_73658957_73661986_73662043_73671541_73671598_73687258_73687386_73689374_73689516_73695901
transcript_59751.known	chr14	+	8417	8	FSM	ENSG00000119661.15	ENST00000553645.7	8417	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	12.328828005938	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	73643738	True	NA	11	True	AATAAA	-22	NA	73644985	73703732	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73645043_73654846_73654886_73658846_73658957_73661986_73662043_73671541_73671598_73687258_73687386_73689374_73689516_73695901
transcript_59755.known	chr14	-	2602	1	FSM	ENSG00000176903.5	ENST00000316836.5	2602	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	641	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTCTTCTCATTTTTCT	-73712655	True	NA	-3	True	ATTAAA	-16	NA	73714384	73711782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_73711800_73714400
transcript_59757.known	chr14	-	3839	12	FSM	ENSG00000156030.14	ENST00000286523.9	8091	12	0	4252	0	-1	multi-exon	FALSE	canonical	1	1	junction_3	2.76638619176417	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAGAAGAAGAAAAAAACAG	-73759975	True	NA	0	True	NA	NA	NA	73760298	73719382	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_73719502_73721296_73721510_73722697_73722848_73725271_73725361_73726032_73726109_73726603_73726708_73726829_73726973_73727457_73727525_73729639_73729986_73736997_73737298_73738559_73740256_73759762
transcript_59758.known	chr14	-	7721	12	FSM	ENSG00000156030.14	ENST00000394071.6	7721	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	2.76638619176417	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGAATGCTTTGTTCTC	-73786880	True	NA	-5	True	ATTAAA	-19	NA	73787258	73715121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_73719502_73721296_73721510_73722697_73722848_73725271_73725361_73726032_73726109_73726603_73726708_73726829_73726973_73727457_73727525_73729639_73729986_73736997_73737298_73738559_73740256_73787101
transcript_59759.known	chr14	+	656	3	FSM	ENSG00000259065.2	ENST00000556194.2	656	3	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTTGATTTAACAAATAC	73787337	True	NA	NA	False	AAAACA	-40	NA	73787359	73803300	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73787510_73789026_73789117_73802884
transcript_59766.known	chr14	-	5261	16	FSM	ENSG00000187097.13	ENST00000334696.11	5261	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	9.58795540711829	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAAGTCTTCCTTCGAAG	-74018510	True	NA	-3	True	AATAAA	-19	NA	74019288	73963229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_73967015_73970009_73970126_73971851_73971909_73972883_73973025_73973876_73973979_73974923_73974986_73975935_73976016_73976323_73976413_73977023_73977060_73977298_73977375_73983017_73983162_73986813_73986894_73987885_73988173_74011090_74011151_74015823_74015931_74019249
transcript_5977.known	chr1	-	1097	4	FSM	ENSG00000121769.8	ENST00000373713.7	1097	4	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_2	17.1464281994822	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGGAGAAAATGACCACTG	-31368139	True	NA	NA	False	NA	NA	NA	31373076	31365252	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_31365940_31367392_31367495_31369384_31369558_31372941
transcript_59793.known	chr14	+	2623	12	FSM	ENSG00000119725.21	ENST00000555044.6	2623	12	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	28.7163385405165	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGATAGTTTTTTTAAAA	73884241	True	NA	NA	False	AATAAA	-25	NA	73886858	73932521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73886916_73892026_73892209_73893796_73893933_73896315_73896535_73898070_73898263_73903959_73904111_73904901_73905084_73909340_73909431_73920979_73921106_73922065_73922207_73923394_73923523_73931502
transcript_59798.known	chr14	+	1961	12	FSM	ENSG00000119725.21	ENST00000556396.5	1961	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	49.5108302702508	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCTTCATTCTGACTGT	73886754	False	NA	NA	False	NA	NA	NA	73886807	73931840	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73886916_73892026_73892209_73893796_73893933_73896347_73896535_73898070_73898263_73903959_73904111_73904901_73905084_73909340_73909431_73920979_73921106_73922065_73922207_73923394_73923523_73931502
transcript_59802.known	chr14	+	2109	12	FSM	ENSG00000119723.17	ENST00000334571.7	2109	12	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_5	8.65500380757229	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCATGTTTGGTGGCAGA	73949177	True	NA	NA	False	NA	NA	NA	73950301	73963670	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73950496_73953434_73953570_73955450_73955510_73955804_73955929_73958146_73958278_73958970_73959079_73959161_73959225_73959414_73959523_73961172_73961376_73961454_73961571_73961736_73961904_73962969
transcript_59804.known	chr14	-	5462	12	FSM	ENSG00000119711.13	ENST00000553458.6	5462	12	0	0	0	0	multi-exon	TRUE	canonical	3	156	junction_3	11.3814405978613	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTTTTTGTATTTTA	-74080744	True	NA	NA	False	AATGAA	-27	NA	74084453	74056846	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_74060747_74064821_74064921_74065180_74065361_74066704_74066887_74067379_74067570_74068859_74068982_74071194_74071498_74071895_74071975_74072202_74072365_74072536_74072612_74074954_74075018_74084346
transcript_59809.known	chr14	+	2293	11	FSM	ENSG00000119725.21	ENST00000324593.10	2293	11	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_9	40.1327796196575	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTGGCTCTTGTTTTA	73886751	False	NA	11	True	AATAAA	-17	NA	73886804	73932278	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73886916_73892026_73892209_73893796_73893933_73896315_73896535_73898070_73898263_73903959_73904111_73904901_73905084_73909340_73909431_73920979_73921106_73923394_73923523_73931502
transcript_59816.known	chr14	+	1722	11	FSM	ENSG00000119725.21	ENST00000540593.5	1722	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	51.8328081431057	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAACAGGATGCCTTAGCC	73886599	True	NA	NA	False	NA	NA	NA	73886616	73931597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73886916_73892026_73892209_73893796_73893933_73898070_73898263_73903959_73904111_73904901_73905084_73909340_73909431_73920979_73921106_73922065_73922207_73923394_73923523_73931502
transcript_59832.known	chr14	+	2765	10	FSM	ENSG00000140043.12	ENST00000555661.6	2765	10	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	23.5282861023403	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGCATCTTATACTCTGC	73848821	True	NA	NA	False	AGTAAA	-15	NA	73851830	73885726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73851944_73858815_73858900_73860538_73860658_73874022_73874215_73876997_73877169_73879095_73879306_73880054_73880177_73881204_73881293_73882398_73882439_73884100
transcript_59835.known	chr14	+	2543	10	FSM	ENSG00000140043.12	ENST00000555228.5	2543	10	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	46.2147429846343	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTGAATGTTTTGGCTT	73848834	True	NA	4	True	AGTAAA	-14	NA	73851843	73885456	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73852005_73858815_73858900_73860538_73860658_73874022_73874215_73876997_73877169_73879095_73879306_73880054_73880177_73881204_73881293_73882398_73882439_73884100
transcript_59837.known	chr14	+	2559	10	FSM	ENSG00000140043.12	ENST00000267568.8	2559	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	54.9702500909513	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGTTTTGGCTTATG	73848937	True	NA	7	True	AGTAAA	-17	NA	73851946	73885459	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73852121_73858815_73858900_73860538_73860658_73874022_73874215_73876997_73877169_73879095_73879306_73880054_73880177_73881204_73881293_73882398_73882439_73884100
transcript_5984.known	chr1	+	1900	10	FSM	ENSG00000168528.12	ENST00000373709.8	1900	10	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	22.5492602052145	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTGTGCCCCTCACCCT	31409890	True	NA	29	True	AATAAA	-20	NA	31413212	31434678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_31413305_31423692_31423855_31424682_31424874_31425329_31425410_31425775_31425914_31426653_31426824_31428977_31429069_31429396_31429539_31432966_31433186_31434063
transcript_59842.known	chr14	+	2167	10	FSM	ENSG00000119725.21	ENST00000555730.6	2167	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	62.4620378537197	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGCCCAGTCAGTTCT	73886680	True	NA	-4	True	AATAAA	-2	NA	73886733	73932263	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73886916_73893796_73893933_73896315_73896535_73898070_73898263_73903959_73904111_73904901_73905084_73909340_73909431_73920979_73921106_73923394_73923523_73931502
transcript_59854.known	chr14	-	3592	9	FSM	ENSG00000156050.10	ENST00000651776.1	3592	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1.87082869338697	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACCAAGATTTTCTACTA	-73950400	False	NA	NA	False	AGTAAA	-16	NA	73950414	73932995	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_73934395_73935948_73936089_73937601_73937702_73937947_73938113_73940925_73941054_73942368_73942716_73944334_73944886_73946285_73946606_73949972
transcript_59861.known	chr14	-	726	4	FSM	ENSG00000119711.13	ENST00000556852.1	726	4	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_2	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGACTTTTGGGAAGGAC	-74080738	True	NA	NA	False	NA	NA	NA	74084447	74071877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_74072365_74072536_74072612_74074954_74075018_74084346
transcript_59863.known	chr14	+	1608	12	FSM	ENSG00000119723.17	ENST00000394026.8	1608	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	27.5824833622673	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTCTCTTTTTCTTCTT	73949898	True	NA	NA	False	AATAAA	-14	NA	73949925	73963108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73950181_73953434_73953570_73955450_73955510_73955804_73955929_73958146_73958278_73958970_73959079_73959161_73959225_73959414_73959523_73961172_73961376_73961454_73961571_73961736_73961904_73962969
transcript_59864.known	chr14	+	2461	13	FSM	ENSG00000119725.21	ENST00000398139.7	2461	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	66.3393527419602	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTGGCTCTTGTTTTA	73884253	True	NA	11	True	AATAAA	-17	NA	73886870	73932278	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_73886916_73892026_73892209_73893796_73893933_73896315_73896535_73898070_73898263_73903959_73904111_73904930_73905084_73909340_73909431_73920979_73921106_73922065_73922207_73923394_73923523_73927106_73927229_73931502
transcript_59865.known	chr14	+	1798	6	FSM	ENSG00000205659.12	ENST00000555028.7	2874	6	-3	1079	-3	-24	multi-exon	FALSE	canonical	3	93	junction_1	16.2406896405294	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	74081926	True	NA	NA	False	NA	NA	NA	74084952	74200414	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_74084994_74091231_74091307_74095947_74095986_74097793_74097861_74101154_74101239_74198921
transcript_59867.known	chr14	+	585	6	FSM	ENSG00000205659.12	ENST00000554076.5	585	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	48.9514044742334	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATAGGAAAGATACACAC	74081936	True	NA	NA	False	ATTAAA	-22	NA	74084962	74114295	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_74084994_74091231_74091307_74095947_74095986_74097793_74097861_74101154_74101239_74114005
transcript_59876.known	chr14	-	3035	19	FSM	ENSG00000119688.21	ENST00000356924.9	3035	19	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_17	75.2898104364432	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATTTTCTCACTGTAAA	-74297940	True	NA	NA	False	AATAAA	-22	NA	74302934	74285268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_74286530_74286700_74286817_74287809_74287887_74288206_74288260_74288715_74288766_74289482_74289520_74290026_74290119_74290290_74290500_74292286_74292377_74292550_74292643_74292747_74292870_74293153_74293249_74295147_74295199_74295853_74295980_74296332_74296450_74297929_74298070_74299547_74299676_74300149_74300269_74302874
transcript_5988.nic	chr1	+	2693	9	NIC	ENSG00000168528.12	novel	1900	10	NA	NA	-54	0	intron_retention	FALSE	canonical	3	155	junction_1	18.4932420089069	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCTGTGCCCCTCACCC	31409836	True	NA	28	True	AATAAA	-19	NA	31413158	31434677	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_31413305_31423692_31423855_31424682_31424874_31425329_31425410_31425775_31426824_31428977_31429069_31429396_31429539_31432966_31433186_31434063
transcript_59895.nic	chr14	-	2246	18	NIC	ENSG00000119688.21	novel	3035	19	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_17	84.8679821514785	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTACAGCTTTCTGTCTT	-74297997	True	NA	-31	True	ATTAAA	-3	NA	74302991	74285995	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_74286530_74286700_74286817_74287809_74287887_74288206_74288260_74288715_74288766_74289482_74289520_74290026_74290119_74290290_74290500_74292286_74292377_74292550_74292643_74292747_74292870_74293153_74293249_74295147_74295199_74295853_74295980_74296332_74296450_74297929_74298070_74299547_74299676_74302874
transcript_59896.known	chr14	-	1842	18	FSM	ENSG00000119688.21	ENST00000553486.5	1842	18	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_16	68.737804832194	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACATGGGTCCTGTGCAG	-74297951	True	NA	NA	False	NA	NA	NA	74302945	74286344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_74286530_74286700_74286817_74287809_74287887_74288206_74288260_74288715_74288766_74289482_74289520_74290026_74290119_74290290_74290500_74292286_74292377_74292550_74292643_74292747_74292870_74293153_74293249_74295147_74295199_74295853_74295980_74296332_74296450_74297929_74298070_74300149_74300269_74302874
transcript_59931.nnic	chr14	-	2186	17	NIC	ENSG00000119688.21	novel	1842	18	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_16	76.1934216320543	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTACAGCTTTCTGTCTT	NA	False	NA	-31	True	ATTAAA	-3	NA	74303059	74285995	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_74286530_74286700_74286817_74287809_74287887_74288206_74288260_74288715_74288766_74289482_74289520_74290026_74290119_74290290_74290500_74292286_74292377_74292550_74292643_74292747_74292870_74293153_74293249_74295147_74295199_74295853_74295980_74296332_74296450_74297929_74298070_74302874
transcript_59945.nic	chr14	-	2146	17	NIC	ENSG00000119688.21	novel	1842	18	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	47	junction_11	85.3152014224312	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTACAGCTTTCTGTCTT	-74298001	True	NA	-31	True	ATTAAA	-3	NA	74302995	74285995	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_74286530_74286700_74286817_74287809_74287887_74288206_74288260_74288715_74288766_74289482_74289520_74290026_74290119_74290290_74290500_74292286_74292377_74292550_74292643_74292747_74292870_74295147_74295199_74295853_74295980_74296332_74296450_74297929_74298070_74300149_74300269_74302874
transcript_59976.known	chr14	-	2336	17	FSM	ENSG00000119688.21	ENST00000481935.5	2336	17	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_15	70.4787201926936	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGTTAAACATTAAAAAGA	-74297943	True	NA	31	True	NA	NA	NA	74302937	74286013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_74286817_74287809_74287887_74288206_74288260_74288715_74288766_74289482_74289520_74290026_74290119_74290290_74290500_74292286_74292377_74292550_74292643_74292747_74292870_74293153_74293249_74295147_74295199_74295853_74295980_74296332_74296450_74297929_74298070_74300149_74300269_74302874
transcript_5999.known	chr1	+	2207	12	FSM	ENSG00000142910.16	ENST00000271064.12	2207	12	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_8	6.05211526439754	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACAGTGTCTTGGAACCTC	31575426	True	NA	7	True	AATAAA	-17	NA	31576514	31587686	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_31576596_31577133_31577459_31579203_31579268_31583148_31583242_31583460_31583576_31584677_31584802_31584885_31585037_31585150_31585341_31585439_31585486_31585752_31585877_31586709_31586756_31586838
transcript_6.known	ERCC-00019	+	627	1	FSM	ERCC-00019A	DQ883651	627	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	627	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00019_+_0_600
transcript_60.known	ERCC-00162	+	507	1	FSM	ERCC-00162A	DQ516750	507	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	507	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00162_+_0_500
transcript_6001.nic	chr1	+	1885	11	NIC	ENSG00000142910.16	novel	2207	12	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	16.1554944214035	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACAGTGTCTTGGAACCTC	31575423	True	NA	7	True	AATAAA	-17	NA	31576511	31587686	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_31576596_31579203_31579268_31583148_31583242_31583460_31583576_31584677_31584802_31584885_31585037_31585150_31585341_31585439_31585486_31585752_31585877_31586709_31586756_31586838
transcript_6007.known	chr1	-	5418	71	FSM	ENSG00000084636.18	ENST00000373672.8	5418	71	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_52	8.90430989430835	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTATTTCCCTCCTTGCCT	-31703960	False	NA	NA	False	AATAAA	-15	NA	31704017	31652262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_31652854_31653598_31653677_31653866_31654044_31654791_31654859_31655313_31655503_31656399_31656445_31657032_31657069_31658487_31658578_31658913_31658965_31660584_31660639_31661065_31661120_31661413_31661459_31661659_31661705_31662333_31662388_31662586_31662659_31665171_31665235_31665582_31665619_31665881_31665936_31666036_31666082_31667574_31667629_31668164_31668219_31668801_31668856_31670601_31670647_31671614_31671660_31672415_31672503_31672595_31672638_31672723_31672841_31675006_31675040_31675257_31675312_31679631_31679686_31679803_31679852_31680041_31680102_31680904_31680932_31681022_31681068_31682933_31683003_31683193_31683248_31683333_31683370_31683706_31683749_31683949_31684004_31684108_31684232_31684522_31684631_31684820_31684857_31685638_31685771_31686090_31686136_31686243_31686280_31688466_31688503_31688860_31688972_31689049_31689086_31689740_31689852_31690366_31690394_31690528_31690574_31691187_31691227_31691416_31691513_31691597_31691643_31692004_31692068_31692473_31692510_31692597_31692643_31692766_31692809_31693091_31693155_31694143_31694171_31695185_31695222_31695760_31695788_31696087_31696142_31696962_31697089_31697219_31697301_31697905_31698173_31698482_31698607_31699812_31699931_31700040_31700116_31702120_31702228_31703836
transcript_60172.known	chr14	-	838	9	FSM	ENSG00000119688.21	ENST00000556119.5	838	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_7	97.6498847925588	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGAGCGAGTGGGGCTTG	-74297922	True	NA	NA	False	NA	NA	NA	74302916	74292311	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_74292377_74292550_74292643_74292747_74292870_74293153_74293249_74295147_74295199_74295853_74295980_74296332_74296450_74299547_74299676_74302874
transcript_60228.known	chr14	+	3408	2	FSM	ENSG00000133980.5	ENST00000256362.5	3408	2	0	0	0	0	multi-exon	FALSE	canonical	3	984	junction_1	0	2072	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTGGTCTCTGGTATTT	74336707	True	NA	25	True	AATAAA	-18	NA	74348470	74360008	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_74348653_74356782
transcript_60234.known	chr14	-	796	5	FSM	ENSG00000119655.11	ENST00000238633.6	796	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	668.471016574391	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGGCTGTGGTCTTCT	-74474923	True	NA	-7	True	AATAAA	-27	NA	74493291	74479941	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_74480289_74480710_74480780_74484414_74484588_74486328_74486437_74493192
transcript_60235.known	chr14	-	699	5	FSM	ENSG00000119655.11	ENST00000556009.5	699	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	671.766700573942	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTCTCTTTTTCTGTCT	-74494136	True	NA	-92	True	NA	NA	NA	74494177	74480095	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_74480289_74480701_74480780_74484414_74484588_74486328_74486437_74494030
transcript_60237.known	chr14	+	2581	4	FSM	ENSG00000165898.14	ENST00000556816.6	2581	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	419.154970015732	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCTCAAAAAAAAAAAAAAAA	74480358	True	NA	NA	False	NA	NA	NA	74493764	74497106	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_74493846_74494049_74494153_74494274_74494391_74494825
transcript_60239.known	chr14	-	583	4	FSM	ENSG00000119655.11	ENST00000554482.1	583	4	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_2	679.861423788374	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGGCTGTGGTCTTCT	-74493201	False	NA	-7	True	AATAAA	-27	NA	74493242	74479941	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_74480289_74480701_74480780_74486328_74486437_74493192
transcript_60240.known	chr14	+	925	3	FSM	ENSG00000165898.14	ENST00000555139.1	925	3	0	0	0	0	multi-exon	FALSE	canonical	3	832	junction_1	52.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTCACCAGTTGTACCAA	74480365	True	NA	NA	False	NA	NA	NA	74493771	74495022	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_74493846_74494049_74494153_74494274
transcript_60243.known	chr14	-	729	5	FSM	ENSG00000119655.11	ENST00000553490.5	729	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	668.471016574391	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTAGGTGGTTTCATT	-74474971	True	NA	-78	True	NA	NA	NA	74493339	74480081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_74480289_74480685_74480780_74484414_74484588_74486328_74486437_74493192
transcript_60244.known	chr14	+	851	4	FSM	ENSG00000165898.14	ENST00000298818.12	851	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	419.154970015732	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTTATTGTGTTGTGGA	74480349	True	NA	12	True	TATAAA	-18	NA	74493755	74495366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_74493846_74494049_74494153_74494274_74494405_74494838
transcript_60245.known	chr14	-	5417	20	FSM	ENSG00000119682.18	ENST00000356357.9	5417	20	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_13	12.37525007442	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGAGTGAGTGGCTGCT	-74711805	True	NA	-6	True	AATAAA	-13	NA	74713080	74661255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_74663823_74663898_74664075_74664835_74664926_74667318_74667378_74667464_74667595_74669648_74669775_74669946_74670127_74670761_74670872_74671407_74671484_74672830_74672953_74673076_74673219_74674033_74674112_74675698_74675947_74676140_74676322_74676582_74676753_74683295_74683534_74684453_74684681_74685599_74685661_74692040_74692329_74712932
transcript_60246.known	chr14	-	5409	20	FSM	ENSG00000119682.18	ENST00000681099.1	5409	20	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_16	18.1820586738061	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAACTAAGGAGTGAGTG	-74711833	True	NA	-12	True	AATAAA	-7	NA	74713108	74661261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_74663823_74663898_74664075_74664835_74664926_74667318_74667378_74667464_74667595_74669648_74669775_74669946_74670127_74670761_74670872_74671407_74671484_74672830_74672953_74673076_74673219_74674033_74674112_74675698_74675947_74676140_74676322_74676582_74676753_74683295_74683534_74684483_74684681_74685599_74685661_74692040_74692329_74712932
transcript_60249.known	chr14	+	8195	21	FSM	ENSG00000119596.18	ENST00000325680.12	8195	21	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	53.1359341688842	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTATTTTCATTGCTTA	74757034	True	NA	NA	False	ATTAAA	-27	NA	74763315	74837318	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_74764363_74778446_74778684_74780404_74780585_74781333_74782326_74797579_74799698_74802555_74802677_74809379_74809798_74809909_74810003_74810224_74810421_74811619_74811739_74812627_74812783_74816202_74816266_74816570_74816691_74816930_74817108_74817193_74817278_74818230_74818315_74821056_74821138_74824255_74824308_74829212_74829344_74835264_74835448_74835774
transcript_6025.known	chr1	-	1614	5	FSM	ENSG00000162517.13	ENST00000373703.5	1614	5	0	0	0	0	multi-exon	TRUE	canonical	3	212	junction_4	36.0234298755685	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCATGTTTTCCACCATG	-31640074	True	NA	-4	True	AATAAA	-17	NA	31644876	31629865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_31630843_31632494_31632639_31633158_31633315_31635221_31635523_31644840
transcript_60252.known	chr14	+	2813	15	FSM	ENSG00000119689.15	ENST00000334220.9	2813	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	5.72899891529302	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTTCCTGTATCTGTTC	74873772	True	NA	7	True	ATTAAA	-18	NA	74881915	74903743	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_74882017_74882590_74882625_74885585_74885635_74889094_74889148_74889274_74889350_74889896_74889953_74891055_74891168_74892833_74892987_74893347_74893425_74894311_74894410_74898368_74898500_74899922_74899997_74900288_74900373_74901065_74901234_74902195
transcript_60265.known	chr14	-	5322	12	FSM	ENSG00000198208.12	ENST00000557413.6	5322	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	9.68683182179817	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTGACTCTTTTTGGCA	-74922524	True	NA	NA	False	AATAAA	-21	NA	74923260	74903950	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_74907125_74907434_74907531_74908849_74908933_74909100_74909191_74909542_74910149_74911247_74911381_74911793_74911842_74918512_74918606_74919844_74919970_74921276_74921562_74921977_74922486_74923179
transcript_6027.known	chr1	-	750	4	FSM	ENSG00000162517.13	ENST00000478502.5	750	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	112.221012094686	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAAATAGTGAGGACCGG	-31640094	True	NA	NA	False	NA	NA	NA	31644896	31630448	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_31630843_31632494_31632639_31633158_31633315_31644840
transcript_60291.nic	chr14	-	2798	4	NIC	ENSG00000198208.12	novel	1626	7	NA	NA	0	1784	intron_retention	FALSE	canonical	3	17	junction_3	6.54896090146283	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGGCAGACAGGCCCTT	-74922566	True	NA	NA	False	AATAAA	-37	NA	74923302	74918087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_74919970_74921276_74921562_74921977_74922486_74923179
transcript_60293.nic	chr14	-	841	2	ISM	ENSG00000198208.12	ENST00000553894.6	1626	7	-47	10878	0	-252	5prime_fragment	FALSE	canonical	3	17	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAATCCTGAGCTGGTTAT	-74922566	True	NA	NA	False	AAAAAG	-10	NA	74923302	74921767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_74922486_74923179
transcript_60294.known	chr14	-	1693	7	FSM	ENSG00000119630.14	ENST00000238607.10	1693	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	13.2916013582513	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAAAGTATTCTAGTGTG	-74955366	True	NA	-28	True	NA	NA	NA	74955577	74941857	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_74942734_74946212_74946276_74946378_74946409_74948506_74948584_74949356_74949554_74953903_74953944_74955167
transcript_60295.known	chr14	-	1699	6	FSM	ENSG00000119630.14	ENST00000553716.5	1699	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	12.1161049846888	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAAACGCTGATCTAGTG	-74955415	True	NA	-11	True	AATAAA	-11	NA	74955626	74941840	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_74942734_74946378_74946409_74948506_74948584_74949356_74949554_74953903_74953947_74955167
transcript_60297.known	chr14	+	4304	8	FSM	ENSG00000119718.11	ENST00000266126.10	4304	8	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_4	13.7914495841682	272	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCAGTTTGTAAAGACACT	75002905	False	NA	NA	False	AATAAA	-16	NA	75002920	75012366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_75003154_75003274_75003396_75003550_75003700_75004736_75004901_75005865_75005962_75006576_75006715_75007721_75007789_75009030
transcript_60302.known	chr14	-	7820	13	FSM	ENSG00000119684.16	ENST00000355774.7	7820	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_8	15.3104448734262	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTCCTTCCATCCCTCT	-75050287	True	NA	-11	True	AATAAA	-15	NA	75051467	75013774	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_75017202_75018828_75018981_75022813_75022893_75022994_75023019_75030542_75030703_75032067_75032180_75033418_75033491_75038339_75038413_75039910_75040016_75041614_75041701_75042378_75042478_75046375_75049719_75051379
transcript_60304.known	chr14	-	7819	12	FSM	ENSG00000119684.16	ENST00000380968.6	7819	12	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	19.2074365763553	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCATCCCTCTCTTCAT	NA	False	NA	-5	True	AATAAA	-21	NA	75051532	75013768	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_75017202_75018828_75018981_75022813_75022893_75022994_75023019_75030542_75030703_75032067_75032180_75038339_75038413_75039910_75040016_75041614_75041701_75042378_75042478_75046375_75049719_75051379
transcript_60305.known	chr14	-	616	2	FSM	ENSG00000119684.16	ENST00000553263.1	616	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTAGACTGGAGTTTGAG	-75050324	True	NA	NA	False	NA	NA	NA	75051504	75049168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_75049719_75051438
transcript_60308.known	chr14	-	8278	22	FSM	ENSG00000119638.14	ENST00000238616.10	8278	22	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_10	18.3285708099816	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGCTCCTATTTAAATA	-75123739	True	NA	NA	False	ATTAAA	-16	NA	75127048	75079352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_75084687_75087017_75087231_75088479_75088642_75091269_75091479_75095371_75095432_75097099_75097271_75100991_75101154_75101656_75101766_75103841_75103998_75105949_75105997_75106501_75106703_75107342_75107488_75109684_75109878_75110320_75110372_75113338_75113404_75114202_75114314_75117194_75117327_75118829_75118936_75120509_75120581_75121118_75121175_75124045_75124224_75126702
transcript_60309.known	chr14	-	6010	22	FSM	ENSG00000119638.14	ENST00000678531.1	6010	22	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_21	25.417422203558	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAACCTCACAGAATGAT	-75123731	True	NA	-21	True	AATAAA	-11	NA	75127040	75081410	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_75084687_75087017_75087231_75088479_75088642_75091269_75091479_75095371_75095432_75097099_75097271_75100991_75101154_75101656_75101766_75103841_75103998_75105949_75105997_75106501_75106703_75107342_75107488_75109684_75109878_75110320_75110372_75113338_75113404_75114202_75114314_75117194_75117327_75118829_75118936_75120509_75120581_75121118_75121175_75124045_75124224_75126904
transcript_6031.known	chr1	-	2472	15	FSM	ENSG00000134668.13	ENST00000257100.7	2472	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_14	2.61080955464244	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCATCTGCTAGCTGGTCA	-31815892	True	NA	-3	True	AATAAA	-20	NA	31816022	31790421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_31791253_31792214_31792402_31792677_31792768_31793277_31793429_31793746_31793898_31794123_31794236_31796589_31796716_31798206_31798324_31798441_31798602_31799400_31799486_31799808_31799864_31800015_31800142_31800440_31800618_31801663_31801706_31815960
transcript_60310.known	chr14	-	6172	22	FSM	ENSG00000119638.14	ENST00000678037.1	6172	22	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_10	25.5540865199381	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAACCTCACAGAATGAT	-75123655	True	NA	-21	True	AATAAA	-11	NA	75126964	75081410	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_75084687_75087017_75087231_75088479_75088642_75091269_75091479_75095371_75095432_75097099_75097271_75100991_75101154_75101656_75101766_75103841_75103998_75105949_75105997_75106465_75106703_75107342_75107488_75109684_75109878_75110320_75110372_75113338_75113404_75114202_75114314_75117194_75117327_75118829_75118936_75120509_75120581_75121118_75121175_75124045_75124224_75126702
transcript_60317.nic	chr14	-	1570	11	NIC	ENSG00000119638.14	novel	2667	9	NA	NA	-13	757	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	19.4010309004444	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATAAGACCTCTTTATTT	-75123757	True	NA	NA	False	AATAAA	-19	NA	75127066	75107512	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_75107756_75109684_75109878_75110320_75110372_75113338_75113404_75114202_75114314_75117194_75117327_75118829_75118936_75120509_75120581_75121118_75121175_75124045_75124224_75126702
transcript_60319.known	chr14	-	1161	6	FSM	ENSG00000170348.9	ENST00000555873.1	1161	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	937.372796703638	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAAGATTTTTGTGTGAC	-75147671	True	NA	NA	False	NA	NA	NA	75176597	75134499	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_75135007_75135759_75135887_75139073_75139172_75147663_75147738_75152031_75152144_75176354
transcript_60320.known	chr14	-	4109	5	FSM	ENSG00000170348.9	ENST00000303575.9	4109	5	0	0	0	0	multi-exon	FALSE	canonical	3	1841	junction_2	41.4276477729547	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAGGTGTACTGTTACTC	-75147686	True	NA	-32	True	AATAAA	-16	NA	75176612	75131468	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_75135007_75135759_75135887_75147663_75147738_75152031_75152144_75176354
transcript_60323.nnic	chr14	-	716	4	NNC	ENSG00000119640.9	novel	580	3	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	126.720164141308	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTAGAGTACTTTTAAAA	-75060579	True	NA	-23	True	AATAAA	-16	NA	75064046	75053242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_-_75053660_75056446_75056561_75063469_75063562_75063953
transcript_60324.known	chr14	+	1509	3	FSM	ENSG00000119703.15	ENST00000439583.2	1509	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGACTTGTGGTTTGTG	75069531	True	NA	20	True	ATTAAA	-15	NA	75069640	75078089	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_75069750_75070554_75071397_75077531
transcript_60326.known	chr14	+	3923	3	FSM	ENSG00000119703.15	ENST00000524913.3	3923	3	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_2	3	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTGTTCCCTTTAATCT	75069531	True	NA	NA	False	AATAAA	-16	NA	75069640	75079988	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_75069750_75070554_75071912_75077531
transcript_60327.known	chr14	+	1551	3	FSM	ENSG00000119703.15	ENST00000526130.2	1551	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGGGCTGGTATGCTT	75069567	True	NA	-78	True	ACTAAA	-5	NA	75069676	75077991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_75069926_75070554_75071397_75077531
transcript_60329.known	chr14	-	580	3	FSM	ENSG00000119640.9	ENST00000238618.8	580	3	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_2	14	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTAGAGTACTTTTAAAA	-75060557	True	NA	-23	True	AATAAA	-16	NA	75064024	75053242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_75053660_75063469_75063562_75063953
transcript_60330.known	chr14	+	3082	2	FSM	ENSG00000119703.15	ENST00000674086.1	3082	2	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATGTCTCCTAAACCTTC	75069552	True	NA	NA	False	AATACA	-20	NA	75069661	75078363	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_75071912_75077531
transcript_60331.known	chr14	+	4322	2	FSM	ENSG00000119703.15	ENST00000674017.1	4322	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAGACTCCATCTCAAAA	75068732	False	NA	NA	False	NA	NA	NA	75068742	75079199	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_75071397_75077531
transcript_60332.known	chr14	-	789	3	FSM	ENSG00000119640.9	ENST00000555463.1	789	3	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_2	151.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTACTTTTAAAAAATCTT	-75069206	True	NA	-17	True	AATAAA	-22	NA	75069483	75053236	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_75053660_75063469_75063562_75069209
transcript_60333.known	chr14	+	1697	3	FSM	ENSG00000119703.15	ENST00000525046.2	1697	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGACTTGTGGTTTGTG	75069542	True	NA	20	True	ATTAAA	-15	NA	75069651	75078089	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_75069949_75070554_75071397_75077531
transcript_60334.known	chr14	+	2104	4	FSM	ENSG00000170345.10	ENST00000303562.9	2104	4	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	7.58653778449403	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACCTTGTGCTCTTTTCA	75277824	True	NA	10	True	AATAAA	-21	NA	75278827	75282230	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_75279124_75279876_75280129_75280559_75280668_75280782
transcript_60338.known	chr14	+	5401	4	FSM	ENSG00000140044.13	ENST00000435893.6	5401	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	54.0205722130211	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGAGGTTTTGTTTTTATT	75428346	False	NA	NA	False	AATAAA	-23	NA	75428356	75474111	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_75428607_75437897_75438122_75461425_75461531_75469289
transcript_60346.nic	chr14	+	4502	33	NIC	ENSG00000119685.20	novel	4716	32	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	25	junction_19	30.9743940366474	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTTTGCTTCCTCTTCTT	75658892	True	NA	23	True	TATAAA	-20	NA	75661245	75954826	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_75661388_75663054_75663224_75669415_75669523_75681544_75681628_75683549_75683657_75690191_75690323_75699187_75699271_75707017_75707088_75707622_75707708_75717860_75717963_75719734_75719827_75720595_75720704_75732337_75732420_75733988_75734051_75735194_75735290_75745094_75745209_75745489_75745582_75752892_75752956_75757830_75757870_75764614_75764773_75766061_75766369_75771733_75771855_75775483_75775631_75776746_75776851_75779574_75779703_75782486_75782574_75783146_75783531_75792915_75793101_75820006_75820162_75863666_75863863_75882684_75882903_75902141_75902225_75954423
transcript_60352.known	chr14	+	4716	32	FSM	ENSG00000119685.20	ENST00000298832.14	4716	32	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	17.3103519039476	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTTTTTTTCCCTTTA	75658892	True	NA	11	True	AATAAA	-16	NA	75661245	75955079	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_75661388_75663054_75663224_75669415_75669523_75681544_75681628_75683549_75683657_75690191_75690323_75699187_75699271_75707017_75707088_75707622_75707708_75717860_75717963_75719734_75719827_75720595_75720704_75732337_75732420_75733988_75734051_75735194_75735290_75745094_75745209_75745489_75745582_75752892_75752956_75764614_75764773_75766061_75766369_75771733_75771855_75775483_75775631_75776746_75776851_75779574_75779703_75782486_75782574_75783146_75783531_75792915_75793101_75820006_75820162_75863666_75863863_75882684_75882903_75902141_75902225_75954423
transcript_60355.nic	chr14	+	4743	32	NIC	ENSG00000119685.20	novel	4716	32	NA	NA	-8	-2	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	23.5573116097945	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTTTGCTTCCTCTTCTT	75658862	True	NA	23	True	TATAAA	-20	NA	75661215	75954826	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_75661638_75663054_75663224_75669415_75669523_75681544_75681628_75683549_75683657_75690191_75690323_75699187_75699271_75707017_75707088_75707622_75707708_75717860_75717963_75719734_75719827_75720595_75720704_75732337_75732420_75733988_75734051_75735194_75735290_75745094_75745209_75745489_75745582_75752892_75752956_75764614_75764773_75766061_75766369_75771733_75771855_75775483_75775631_75776746_75776851_75779574_75779703_75782486_75782574_75783146_75783531_75792915_75793101_75820006_75820162_75863666_75863863_75882684_75882903_75902141_75902225_75954423
transcript_60371.known	chr14	+	3629	10	FSM	ENSG00000119686.10	ENST00000238667.9	3629	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	16.669629366302	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTCTGCCTTATCATTCA	75578155	True	NA	6	True	AATAAA	-14	NA	75578619	75648167	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_75579642_75622078_75622221_75624611_75624753_75633628_75633697_75634909_75635014_75639351_75639463_75640954_75641061_75641181_75641294_75641842_75641899_75646400
transcript_60378.nic	chr14	+	2797	8	NIC	ENSG00000119686.10	novel	669	7	NA	NA	-361	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_4	9.61716153126105	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTCTGCCTTATCATTCA	75631317	True	NA	6	True	AATAAA	-14	NA	75631352	75648167	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_75631826_75633628_75633697_75634909_75635014_75639351_75639463_75640954_75641061_75641181_75641294_75641842_75641899_75646400
transcript_60386.known	chr14	-	2320	5	FSM	ENSG00000133935.7	ENST00000256319.7	2320	5	0	0	0	0	multi-exon	FALSE	canonical	3	1203	junction_2	74.7813479418498	498	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAAGGTCAGAAAAGG	-75649610	True	NA	NA	False	NA	NA	NA	75660876	75649790	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_75651635_75651770_75651890_75654885_75654977_75657369_75657534_75660774
transcript_60394.known	chr14	+	441	2	FSM	ENSG00000119686.10	ENST00000554496.1	441	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGCACCTATCACCAAA	75578991	False	NA	NA	False	NA	NA	NA	75579455	75646655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_75579642_75646400
transcript_60395.known	chr14	+	1008	10	FSM	ENSG00000119650.13	ENST00000679083.1	1008	10	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	105.817569546325	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCTCCATTTCTTTCCA	75983087	True	NA	8	True	AATAAA	-17	NA	75985752	76083741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_75985841_75986125_75986309_75988884_75988978_76022326_76022395_76058641_76058675_76059326_76059374_76082294_76082368_76082616_76082693_76083226_76083290_76083457
transcript_60397.known	chr14	+	816	9	FSM	ENSG00000119650.13	ENST00000314067.11	816	9	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_4	30.4094454898474	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTCCATTTCTTTCCAG	75983097	True	NA	9	True	AATAAA	-18	NA	75985762	76083742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_75985841_75988884_75988978_76022326_76022395_76058641_76058675_76059326_76059374_76082294_76082368_76082616_76082693_76083226_76083290_76083457
transcript_60399.nic	chr14	+	1277	9	NIC	ENSG00000119650.13	novel	816	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	43	junction_1	81.9320411987886	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTCCATTTCTTTCCAG	75983104	True	NA	9	True	AATAAA	-18	NA	75985769	76083742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_75986309_75988884_75988978_76022326_76022395_76058641_76058675_76059326_76059374_76082294_76082368_76082616_76082693_76083226_76083290_76083457
transcript_604.known	chr1	-	2450	16	FSM	ENSG00000127054.22	ENST00000323275.10	2450	16	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_14	132.040128580502	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTGGTACTCTCTTCTT	-1318698	True	NA	-17	True	AGTAAA	-15	NA	1324621	1311599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1311925_1312017_1312148_1312225_1312369_1312439_1312502_1312592_1312701_1312786_1312950_1313034_1313125_1313508_1313593_1313731_1313922_1314300_1314366_1314823_1314963_1315403_1315439_1315519_1315619_1319295_1319434_1320455_1321094_1324580
transcript_60401.nic	chr14	+	992	8	ISM	ENSG00000119650.13	ENST00000314067.11	816	9	-10	2	0	-1	intron_retention	FALSE	canonical	3	228	junction_4	32.5080837670276	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCCTCCATTTCTTTCC	75983087	True	NA	7	True	AATAAA	-16	NA	75985752	76083740	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_75985841_75988884_75988978_76022326_76022395_76058641_76058675_76059326_76059374_76082294_76082368_76082616_76082693_76083226
transcript_60402.nic	chr14	+	1075	8	ISM	ENSG00000119650.13	ENST00000555305.5	1765	9	-27	843	0	0	5prime_fragment	FALSE	canonical	3	228	junction_4	32.504316824768	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTCCATTTCTTTCCAG	75983087	True	NA	9	True	AATAAA	-18	NA	75985752	76083742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_75985841_75988884_75988978_76022326_76022395_76058641_76058675_76059326_76059374_76082294_76082693_76083226_76083290_76083457
transcript_60404.nic	chr14	+	1526	8	NIC	ENSG00000119650.13	novel	816	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	43	junction_1	87.010438032058	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTCCATTTCTTTCCAG	75983104	True	NA	9	True	AATAAA	-18	NA	75985769	76083742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_75986309_75988884_75988978_76022326_76022395_76058641_76058675_76059326_76059374_76082294_76082693_76083226_76083290_76083457
transcript_6041.nnic	chr1	-	3661	8	NNC	ENSG00000184007.22	novel	3910	6	NA	NA	-22	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	608.01664853683	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTCTTTGTGCATTTTTTT	-31925274	True	NA	-26	True	AATAAA	-13	NA	31938390	31906425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_31908112_31908197_31908961_31910037_31910113_31911695_31911827_31915894_31915988_31918969_31919659_31937986_31938075_31938254
transcript_60414.known	chr14	+	848	4	FSM	ENSG00000119650.13	ENST00000556742.1	848	4	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_1	32.6190128606002	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCCGTGTTTGAAACTCA	75983118	True	NA	2	True	AATAAA	-15	NA	75985783	76059271	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_75985841_75988884_75988978_76022326_76022395_76058641
transcript_60417.known	chr14	-	3431	7	FSM	ENSG00000119699.8	ENST00000238682.8	3431	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	0.816496580927726	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTGACTCGATAAATATC	-75981928	True	NA	NA	False	AGTAAA	-20	NA	75981995	75958096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_75959346_75960922_75961077_75963315_75963488_75965587_75965696_75971125_75971256_75971554_75971719_75980541
transcript_6042.nnic	chr1	-	3661	8	NNC	ENSG00000184007.22	novel	3910	6	NA	NA	-24	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	608.01664853683	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTCTTTGTGCATTTTTTT	-31925276	True	NA	-26	True	AATAAA	-13	NA	31938392	31906425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_31908112_31908197_31908961_31910037_31910113_31911695_31911827_31915894_31915988_31918969_31919659_31937986_31938081_31938262
transcript_60426.nnic	chr14	+	3247	10	NNC	ENSG00000089916.18	novel	14021	10	NA	NA	-11	-2477	intron_retention	FALSE	canonical	3	22	junction_9	38.7871685541036	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGGATTGTATTCCTGT	76146177	True	NA	5	True	ATTAAA	-14	NA	76151904	76199530	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_+_76151992_76154353_76155026_76166662_76166728_76171842_76172020_76173545_76173626_76176622_76176691_76177987_76178043_76180763_76180850_76195877_76195973_76197668
transcript_60429.known	chr14	+	14021	10	FSM	ENSG00000089916.18	ENST00000261530.12	14021	10	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_9	23.6068623628233	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGATTTCCTCTGCCAT	76146194	True	NA	-4	True	NA	NA	NA	76151921	76214343	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_76151992_76154353_76155026_76166662_76166728_76171842_76172020_76173545_76173626_76176622_76176691_76177987_76178043_76180763_76180850_76195877_76195973_76201690
transcript_60437.nic	chr14	+	4939	9	ISM	ENSG00000089916.18	ENST00000261530.12	14021	10	-17	14817	-11	-2481	5prime_fragment	FALSE	canonical	3	109	junction_7	16.0618920118397	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACATTTGGATTGTATTC	76146177	True	NA	1	True	ATTAAA	-10	NA	76151904	76199526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_76151992_76154353_76155026_76166662_76166728_76171842_76172020_76173545_76173626_76176622_76176691_76177987_76178043_76180763_76180850_76195877
transcript_60447.known	chr14	+	1458	5	FSM	ENSG00000089916.18	ENST00000557263.5	1458	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	65.8198298387348	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAACAAAACTG	76146194	True	NA	NA	False	NA	NA	NA	76151921	76174035	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_76151976_76154353_76155026_76166662_76166728_76171842_76172020_76173545
transcript_60461.known	chr14	-	5287	10	FSM	ENSG00000013523.11	ENST00000251089.8	5287	10	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_5	18.5472369909914	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGAAGAATTTTCAGAT	-76811315	True	NA	NA	False	ATTAAA	-18	NA	76812882	76786008	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_76789389_76790610_76790775_76791296_76791367_76803370_76803482_76803785_76803913_76806415_76806850_76807432_76807503_76807921_76808149_76809058_76809644_76812763
transcript_60466.nnic	chr14	-	4729	9	NIC	ENSG00000013523.11	novel	5287	10	NA	NA	-11	-135	combination_of_known_splicesites	FALSE	canonical	3	3	junction_5	47.1896108799384	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAGCTAGGAATTAGAAAC	-76811326	True	NA	NA	False	AAAAAG	-24	NA	76812893	76786143	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_76789389_76790610_76790775_76791296_76791367_76803370_76803482_76803785_76803913_76807432_76807503_76807921_76808149_76809058_76809644_76812763
transcript_60468.nnic	chr14	-	3683	9	NIC	ENSG00000013523.11	novel	5287	10	NA	NA	-64	-1234	combination_of_known_splicesites	FALSE	canonical	3	3	junction_5	47.1896108799384	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTTCATTTTATTAGGA	-76811379	True	NA	1	True	AATAAA	-23	NA	76812946	76787242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_76789389_76790610_76790775_76791296_76791367_76803370_76803482_76803785_76803913_76807432_76807503_76807921_76808149_76809058_76809644_76812763
transcript_60475.known	chr14	+	1462	4	FSM	ENSG00000071246.11	ENST00000554237.1	1462	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	3.09120616516523	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAACAAGGTTTTCCAGT	76762317	False	NA	NA	False	ATTAAA	-29	NA	76762328	76773650	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_76763131_76769962_76770052_76771189_76771247_76773136
transcript_60477.known	chr14	+	6449	7	FSM	ENSG00000071246.11	ENST00000167106.9	6449	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	3.09120616516523	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTAAGCCTTGTCTCCTT	76760642	True	NA	5	True	AATAAA	-43	NA	76761467	76783015	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_76763131_76769962_76770052_76771189_76771247_76773136_76773212_76775891_76776274_76777958_76778072_76778945
transcript_60480.nnic	chr14	-	3923	3	Genic_Genomic	ENSG00000119669.5	novel	4166	1	NA	NA	0	-3	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGCGCTGAGTCAGCAA	-77020889	True	NA	-15	True	AATAAA	-13	NA	77028708	77024545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Genic_Genomic_chr14_-_77027481_77027567_77027904_77028056
transcript_60484.nnic	chr14	+	1153	2	Genic_Genomic	ENSG00000273729.1	novel	3487	1	NA	NA	-784	-2541	multi-exon	FALSE	canonical	2	10	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTAGCGTCGTTTCCGAT	77027263	False	NA	6	True	AGTAAA	-15	NA	77027301	77029031	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Genic_Genomic_chr14_+_77027812_77028388
transcript_60485.nnic	chr14	-	4101	2	Genic_Genomic	ENSG00000119669.5	novel	4166	1	NA	NA	-25	-3	multi-exon	FALSE	canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGCGCTGAGTCAGCAA	-77020914	True	NA	-15	True	AATAAA	-13	NA	77028733	77024545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Genic_Genomic_chr14_-_77027481_77027567
transcript_60487.known	chr14	-	4166	1	FSM	ENSG00000119669.5	ENST00000238647.5	4166	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCGCTGAGTCAGCAATTT	-77020889	True	NA	-12	True	AATAAA	-16	NA	77028708	77024542	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_77024500_77028700
transcript_60488.known	chr14	-	424	2	FSM	ENSG00000258819.2	ENST00000555512.1	424	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAGCAGCTCAGCTAAGG	NA	False	NA	NA	False	NA	NA	NA	77076344	77070662	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_77070847_77076104
transcript_60492.known	chr14	+	584	5	FSM	ENSG00000198894.8	ENST00000554658.5	584	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	62.4834978214248	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCTGTCAGTCCATGTC	77094827	True	NA	NA	False	NA	NA	NA	77098311	77113522	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_77098362_77099883_77099962_77105656_77105845_77109811_77109982_77113424
transcript_60493.known	chr14	+	4325	4	FSM	ENSG00000198894.8	ENST00000361786.7	4325	4	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	12.2836838484589	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCTTTTTGCTTTATA	77094773	True	NA	10	True	AATAAA	-21	NA	77098257	77117287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_77098362_77105656_77105845_77109811_77109982_77113424
transcript_60500.known	chr14	-	3408	3	FSM	ENSG00000177108.5	ENST00000319374.4	3408	3	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_2	3.5	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATATGATTGTATGGGC	-77135276	True	NA	-4	True	AATAAA	-21	NA	77141791	77131269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_77133949_77139212_77139753_77141602
transcript_60503.known	chr14	+	2314	1	FSM	ENSG00000269883.1	ENST00000600936.1	2314	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTGGCTGATTAAAACAAG	77140658	True	NA	4	True	AATAAA	-21	NA	77140682	77142996	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_77140700_77143000
transcript_60504.known	chr14	-	1778	4	FSM	ENSG00000165553.5	ENST00000298352.5	1778	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	1.4142135623731	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCGGGCCTGATCTTTTC	-77271180	True	NA	-1	True	AATAAA	-23	NA	77271206	77265482	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_77266671_77268465_77268586_77269214_77269327_77270848
transcript_60509.known	chr14	-	2729	21	FSM	ENSG00000009830.13	ENST00000682247.1	2729	21	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	22.7114508563412	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTAAAATAGTCCAGGCT	-77319515	True	NA	-45	True	AATACA	-32	NA	77320802	77277009	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_77277482_77278393_77278509_77278728_77278859_77279822_77279929_77280020_77280081_77280391_77280464_77283796_77283874_77284949_77285042_77285480_77285633_77286743_77286823_77288761_77288832_77291313_77291381_77296163_77296274_77298688_77298772_77299454_77299562_77301089_77301250_77302834_77302944_77304691_77304801_77306336_77306442_77311948_77312034_77320433
transcript_60520.nic	chr14	-	2756	20	NIC	ENSG00000009830.13	novel	4875	21	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_19	21.6927678567148	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCAGGCTATAGTAATAT	-77319606	True	NA	-35	True	CATAAA	-10	NA	77320893	77276999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_77277482_77278393_77278509_77278728_77278870_77279822_77279929_77280020_77280081_77280391_77280464_77283796_77283874_77284949_77285042_77285480_77285633_77286743_77286823_77288761_77288832_77291313_77291381_77296163_77296274_77298688_77298772_77299454_77299562_77301089_77301250_77302834_77302944_77304691_77304801_77306336_77306442_77320433
transcript_60522.known	chr14	-	4604	20	FSM	ENSG00000009830.13	ENST00000682467.1	4604	20	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	23.848668784024	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTATTTGGTTTAAAAAAAA	-77319540	True	NA	-77	True	NA	NA	NA	77320827	77275029	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_77277482_77278393_77278509_77279822_77279929_77280020_77280081_77280391_77280464_77283796_77283874_77284949_77285042_77285480_77285633_77286743_77286823_77288761_77288832_77291313_77291381_77296163_77296274_77298688_77298772_77299454_77299562_77301089_77301250_77302834_77302944_77304691_77304801_77306336_77306442_77311948_77312034_77320433
transcript_60538.nic	chr14	-	2411	17	NIC	ENSG00000009830.13	novel	4875	21	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_13	20.9596897341063	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCAGGCTATAGTAATAT	-77320880	False	NA	-35	True	CATAAA	-10	NA	77320922	77276999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_77277482_77278393_77278509_77278728_77278870_77279822_77279929_77280020_77280081_77280391_77280464_77283796_77283874_77284949_77285042_77285480_77285633_77286743_77286823_77288761_77288832_77291313_77291381_77296163_77296274_77304691_77304801_77306336_77306442_77311948_77312034_77320433
transcript_6054.nnic	chr1	-	3855	7	NNC	ENSG00000184007.22	novel	3910	6	NA	NA	-36	-5	intron_retention	FALSE	non_canonical	3	851	junction_1	311.14488407957	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTCTTTGTGCATTTTTTT	-31938385	False	NA	-26	True	AATAAA	-13	NA	31938404	31906425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_31908112_31908197_31908961_31910037_31910113_31911695_31911827_31915894_31915988_31918969_31919659_31937986
transcript_60550.known	chr14	+	1186	9	FSM	ENSG00000100577.19	ENST00000216465.10	1186	9	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_5	14.6708682428819	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTTTGTCTAAGACTGA	77316638	True	NA	22	True	ATTAAA	-19	NA	77321035	77331597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_77321184_77324869_77324922_77326837_77326906_77327471_77327553_77327911_77328038_77329122_77329202_77329754_77329808_77330309_77330360_77331068
transcript_60555.known	chr14	+	867	8	FSM	ENSG00000100577.19	ENST00000349555.7	867	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	48.8751011273029	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGGGTGGGCAGGAATAC	77316627	True	NA	-73	True	NA	NA	NA	77321024	77331393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_77321184_77324869_77324922_77326837_77326906_77327471_77327553_77329122_77329202_77329754_77329808_77330309_77330360_77331068
transcript_60558.known	chr14	+	919	8	FSM	ENSG00000100577.19	ENST00000556627.5	919	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	53.2993088747932	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATCTATGTGACGGGGC	77316640	True	NA	-53	True	NA	NA	NA	77321037	77331413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_77321184_77324869_77324922_77326837_77326906_77327911_77328038_77329122_77329202_77329754_77329808_77330309_77330360_77331068
transcript_60559.known	chr14	+	873	8	FSM	ENSG00000100577.19	ENST00000557639.5	873	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	45.2764749475207	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCTGAAACTTGTTCCAC	77316622	True	NA	NA	False	NA	NA	NA	77321019	77331320	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_77321184_77326837_77326906_77327471_77327553_77327911_77328038_77329122_77329202_77329754_77329808_77330309_77330360_77331068
transcript_60562.known	chr14	-	7761	6	FSM	ENSG00000100580.8	ENST00000216468.8	7761	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	5.84465567848098	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGTAACATCTGAGTTAT	-77375584	True	NA	-9	True	AATAAA	-16	NA	77377094	77335028	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_77341989_77343177_77343484_77343696_77343824_77346348_77346479_77351672_77351752_77376935
transcript_60570.known	chr14	-	2761	21	FSM	ENSG00000151445.16	ENST00000343765.6	2761	21	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_19	29.7365095463472	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCGCTCCTGGTGGTTT	-77456242	True	NA	-8	True	AATAAA	-24	NA	77457561	77426674	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_77427637_77428369_77428475_77429005_77429096_77429680_77429768_77433841_77433932_77434261_77434304_77435258_77435394_77435843_77435920_77437807_77437882_77441065_77441094_77442559_77442663_77443118_77443153_77444248_77444342_77448493_77448551_77449292_77449358_77449713_77449753_77451186_77451334_77453298_77453402_77454009_77454103_77457094_77457366_77457494
transcript_60573.known	chr14	-	2530	20	FSM	ENSG00000151445.16	ENST00000557658.6	2530	20	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_7	12.150715583729	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCGCTCCTGGTGGTTT	-77456282	True	NA	-8	True	AATAAA	-24	NA	77457601	77426674	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_77427637_77428369_77428475_77429005_77429096_77429680_77429768_77433841_77433932_77434261_77434304_77435258_77435394_77435843_77435920_77437807_77437882_77441065_77441094_77442559_77442663_77443118_77443153_77444248_77444342_77448493_77448551_77449292_77449358_77449713_77449753_77451186_77451334_77453298_77453402_77454009_77454103_77457494
transcript_60575.known	chr14	-	1623	19	FSM	ENSG00000151445.16	ENST00000448935.6	1623	19	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_16	24.8123824125708	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTTGAGTCATGAGAATG	-77456267	True	NA	NA	False	NA	NA	NA	77457586	77427419	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_77427637_77428369_77428475_77429005_77429096_77429680_77429768_77433841_77433932_77434261_77434304_77435258_77435394_77435843_77435920_77437807_77437882_77441065_77441094_77442559_77442663_77443118_77443153_77444248_77444342_77448493_77448551_77449292_77449358_77449713_77449753_77453298_77453402_77454009_77454103_77457494
transcript_60583.known	chr14	+	1048	9	FSM	ENSG00000100591.8	ENST00000555133.5	1048	9	0	0	0	0	multi-exon	TRUE	canonical	2	25	junction_1	315.175918139378	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCCAGCGGCAGGGGACT	77457659	True	NA	NA	False	ATTAAA	-32	NA	77457869	77469247	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_77457983_77459615_77459807_77462159_77462243_77462641_77462760_77464597_77464687_77465538_77465668_77468082_77468185_77468456_77468509_77469076
transcript_60584.known	chr14	+	1337	9	FSM	ENSG00000100591.8	ENST00000216479.8	1337	9	0	0	0	0	multi-exon	FALSE	canonical	3	837	junction_7	69.1997787207445	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGTGTCTGGAACCTATGT	77447619	True	NA	39	True	AATAAA	-17	NA	77458092	77469472	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_77458270_77459615_77459807_77462159_77462243_77462641_77462760_77464597_77464687_77465538_77465668_77468082_77468185_77468456_77468509_77469076
transcript_60591.known	chr14	-	2934	20	FSM	ENSG00000151445.16	ENST00000553888.5	2934	20	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_19	24.0416305603426	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCGCTCCTGGTGGTTT	-77456286	True	NA	-8	True	AATAAA	-24	NA	77457605	77426674	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_77427637_77428369_77428475_77429005_77429096_77429680_77429768_77433841_77433932_77434261_77434304_77435258_77435394_77435843_77435920_77437807_77437882_77441065_77441094_77442559_77442663_77443118_77443153_77444248_77444342_77448493_77448551_77449292_77449358_77449713_77449753_77451186_77451334_77453298_77453402_77454009_77454103_77457094
transcript_60592.known	chr14	-	2940	7	FSM	ENSG00000100593.18	ENST00000342219.9	2940	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	2.05480466765633	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCCTGATGAAGACTTT	-77498708	True	NA	3	True	AATAAA	-17	NA	77498816	77474393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_77476113_77478241_77478326_77478574_77478716_77482321_77482668_77484322_77484566_77484676_77484920_77498652
transcript_60595.known	chr14	-	8034	12	FSM	ENSG00000100596.8	ENST00000216484.7	8034	12	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_6	21.7023440102029	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGCCTTTATTCATTCA	-77610875	True	NA	-1	True	AATAAA	-16	NA	77616637	77505996	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_77512404_77518037_77518168_77521445_77521582_77552095_77552223_77555299_77555520_77557040_77557147_77562395_77562490_77570383_77570509_77576766_77576916_77578954_77579110_77597185_77597381_77616447
transcript_60600.known	chr14	-	2597	6	FSM	ENSG00000100601.10	ENST00000216489.8	2597	6	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	7.19444229944198	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAAGCTAGGTTCTTTG	-77705621	True	NA	1	True	AATAAA	-21	NA	77708023	77672403	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_77674242_77675655_77675850_77679879_77679971_77694737_77694901_77704368_77704478_77707821
transcript_60601.nic	chr14	-	1882	6	NIC	ENSG00000100601.10	novel	2597	6	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_2	33.2830287083372	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGAATAAACTCACTTGAT	-77705632	True	NA	-60	True	AATAAA	-34	NA	77708034	77673074	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_77674242_77675655_77675795_77679879_77679971_77694737_77694901_77704368_77704478_77707821
transcript_60603.known	chr14	-	1750	5	FSM	ENSG00000100601.10	ENST00000557057.5	1750	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	38.7201497930987	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGAATAAACTCACTTGAT	-77705608	True	NA	-60	True	AATAAA	-34	NA	77708010	77673074	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_77674242_77675655_77675850_77679879_77679971_77704368_77704478_77707821
transcript_60604.nic	chr14	-	735	4	NIC	ENSG00000100601.10	novel	497	3	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	42.2400547137693	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGAGATACCTTTTTTTT	-77705632	True	NA	NA	False	AATAAA	-16	NA	77708034	77691732	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_77691983_77694737_77694901_77704368_77704478_77707821
transcript_60606.known	chr14	-	2129	14	FSM	ENSG00000100603.14	ENST00000261531.12	2129	14	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_13	76.5857990451534	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCAGTTATGTTAACTTT	-77751912	True	NA	-20	True	AATAAA	-16	NA	77761156	77717598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_77718287_77718366_77718531_77720710_77720829_77723180_77723278_77730987_77731130_77732484_77732602_77734946_77735013_77735936_77736007_77736970_77737076_77738777_77738885_77738965_77739062_77751318_77751481_77754966_77755121_77761113
transcript_60608.known	chr14	-	1855	13	FSM	ENSG00000100603.14	ENST00000555761.5	1855	13	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_12	79.3293066204974	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAATGGGGGGGATAGAA	-77751912	True	NA	NA	False	GATAAA	-45	NA	77761156	77717952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_77718531_77720710_77720829_77723180_77723278_77730987_77731130_77732484_77732602_77734946_77735013_77735936_77736007_77736970_77737076_77738777_77738885_77738965_77739062_77751318_77751481_77754966_77755121_77761113
transcript_6061.nnic	chr1	-	1910	7	NNC	ENSG00000184007.22	novel	3910	6	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	624.541075955422	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACTTTTAGATAAAAAAAAAA	-31925274	True	NA	NA	False	NA	NA	NA	31938390	31908262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_31908961_31910037_31910113_31911695_31911827_31915894_31915988_31918969_31919659_31937986_31938075_31938254
transcript_60610.nic	chr14	-	1033	10	ISM	ENSG00000100603.14	ENST00000555761.5	1855	13	-47	13111	4	-208	5prime_fragment	FALSE	canonical	3	510	junction_9	79.6966470785036	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATGAAGAGAAACTTAGAGA	NA	False	NA	19	True	AAGAAA	-9	NA	77761203	77731063	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_77731130_77732484_77732602_77734946_77735013_77735936_77736007_77736970_77737076_77738777_77738885_77738965_77739062_77751318_77751481_77754966_77755121_77761113
transcript_60615.known	chr14	+	285	4	FSM	ENSG00000119705.10	ENST00000553981.1	285	4	0	0	0	0	multi-exon	FALSE	canonical	3	1070	junction_2	6830.7389709232	2363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTCTAAATGTTTTTAT	77571127	True	NA	30	True	AATAAA	-18	NA	77708177	77717598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_77708209_77710837_77710881_77715771_77715880_77717495
transcript_60616.known	chr14	+	865	4	FSM	ENSG00000119705.10	ENST00000557623.5	865	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	7414.92487412306	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATGCTGAGATATAAAATT	77571052	True	NA	NA	False	AATATA	-17	NA	77708102	77721107	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_77708209_77710837_77710897_77715771_77715880_77720515
transcript_60618.known	chr14	+	445	3	FSM	ENSG00000119705.10	ENST00000554074.1	445	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	8267.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCATAGGTATTTGTGT	77571070	True	NA	NA	False	ATTAAA	-13	NA	77708120	77712038	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_77708209_77710837_77710897_77711740
transcript_60619.known	chr14	+	729	3	FSM	ENSG00000119705.10	ENST00000556831.5	729	3	0	0	0	0	multi-exon	FALSE	canonical	3	14792	junction_2	873.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCGGTGGTAGGCCAGG	77571068	True	NA	NA	False	AAAAAG	-3	NA	77708118	77716351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_77708209_77710837_77710897_77715771
transcript_6062.nnic	chr1	-	1910	7	NNC	ENSG00000184007.22	novel	3910	6	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	624.541075955422	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACTTTTAGATAAAAAAAAAA	-31925276	True	NA	NA	False	NA	NA	NA	31938392	31908262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_31908961_31910037_31910113_31911695_31911827_31915894_31915988_31918969_31919659_31937986_31938081_31938262
transcript_60632.known	chr14	+	3268	11	FSM	ENSG00000063761.16	ENST00000238561.10	3268	11	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	6.35609943282828	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCATGGTTACTTGCTTTT	77799679	True	NA	NA	False	AGTAAA	-23	NA	77800108	77935014	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_77800171_77818967_77819114_77822434_77822519_77859075_77859280_77887090_77887250_77899099_77899259_77907802_77907920_77924456_77924607_77925763_77925962_77931517_77931712_77933219
transcript_60635.nnic	chr14	+	2064	10	NIC	ENSG00000063761.16	novel	3268	11	NA	NA	-56	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_8	13.5190765993379	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATTTGTCCATCATAAC	NA	False	NA	15	True	AATAAA	-17	NA	77800052	77933952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_77800171_77818967_77819114_77822434_77822519_77859075_77859280_77887090_77887250_77899099_77899259_77907802_77907920_77924456_77924607_77931517_77931712_77933219
transcript_60636.nic	chr14	+	2145	10	NIC	ENSG00000063761.16	novel	3268	11	NA	NA	-56	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_6	13.6743429209958	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATTTGTCCATCATAAC	NA	False	NA	15	True	AATAAA	-17	NA	77800052	77933952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_77800171_77818967_77819114_77822434_77822519_77859075_77859280_77887090_77887250_77899099_77899259_77924456_77924607_77925763_77925962_77931517_77931712_77933219
transcript_60638.known	chr14	+	1972	10	FSM	ENSG00000063761.16	ENST00000341211.5	1972	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	15.1657508881031	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATTTGTCCATCATAAC	77799709	True	NA	15	True	AATAAA	-17	NA	77800138	77933952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_77800171_77818967_77819114_77822434_77822519_77887090_77887250_77899099_77899259_77907802_77907920_77924456_77924607_77925763_77925962_77931517_77931712_77933219
transcript_60640.known	chr14	+	844	7	FSM	ENSG00000063761.16	ENST00000557501.5	844	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	16.2112786527021	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGCGATCCCCACCCCG	77799705	True	NA	NA	False	NA	NA	NA	77800134	77924512	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_77800171_77818967_77819114_77822434_77822519_77859075_77859280_77887090_77887250_77899099_77899259_77924456
transcript_60642.known	chr14	+	3381	6	FSM	ENSG00000021645.20	ENST00000557594.5	3381	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAACAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-35	NA	79279338	79862478	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_79280539_79467220_79467403_79663777_79663950_79697629_79697938_79805111_79805191_79861038
transcript_60647.nic	chr14	+	2369	2	ISM	ENSG00000021645.20	ENST00000634499.2	5412	22	0	1617507	0	-400970	5prime_fragment	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCAAATTTCTACCTGTG	78170072	True	NA	NA	False	AAAAAG	-24	NA	78170372	78244457	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_78170675_78242390
transcript_60655.known	chr14	-	6343	9	FSM	ENSG00000165417.12	ENST00000553612.6	6343	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	3.59687364248454	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTATTTTGCAGTTTAA	-81210752	True	NA	0	True	AATAAA	-25	NA	81220959	81175451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_81180331_81185530_81185621_81192518_81192840_81196107_81196242_81197408_81197485_81201593_81201659_81203899_81204105_81216412_81216515_81220488
transcript_60661.nic	chr14	-	1478	8	ISM	ENSG00000165417.12	ENST00000553612.6	6343	9	-14	10079	-14	-5322	5prime_fragment	FALSE	canonical	3	11	junction_7	2.89968330431206	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGATGTCATCTTCAGA	-81210766	True	NA	NA	False	NA	NA	NA	81220973	81185530	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_81185621_81192518_81192840_81196107_81196242_81197408_81197485_81201593_81201659_81203899_81204105_81216412_81216515_81220488
transcript_60664.nic	chr14	-	1339	7	ISM	ENSG00000165417.12	ENST00000553612.6	6343	9	-14	17116	-14	4659	5prime_fragment	FALSE	canonical	3	11	junction_6	3.1091263510296	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAGGAAGACAAAGAGAAAG	-81210766	True	NA	NA	False	NA	NA	NA	81220973	81192567	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_81192840_81196107_81196242_81197408_81197485_81201593_81201659_81203899_81204105_81216412_81216515_81220488
transcript_60666.nic	chr14	-	2179	7	ISM	ENSG00000140022.14	ENST00000649389.1	4382	9	-39	17008	-33	686	5prime_fragment	FALSE	canonical	3	10	junction_2	9.1469484893415	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAGAAGAAATACCAGCC	-81431306	True	NA	NA	False	TATAAA	-1	NA	81436498	81277789	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_81278740_81324016_81324188_81370987_81371186_81395893_81396179_81398294_81398581_81427101_81427213_81436320
transcript_60667.nic	chr14	-	2008	6	NIC	ENSG00000140022.14	novel	11084	9	NA	NA	-33	686	combination_of_known_junctions	FALSE	canonical	2	11	junction_3	8.40476055578028	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAGAAGAAATACCAGCC	-81431306	True	NA	NA	False	TATAAA	-1	NA	81436498	81277789	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_81278740_81370987_81371186_81395893_81396179_81398294_81398581_81427101_81427213_81436320
transcript_60671.known	chr14	-	7919	21	FSM	ENSG00000071537.14	ENST00000336735.9	7919	21	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_10	15.2390124351941	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGTTTCCCACTGCCTCC	-81532593	True	NA	NA	False	TATAAA	-19	NA	81533853	81471546	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_81477182_81479611_81479741_81484224_81484398_81485671_81485747_81486288_81486455_81487389_81487539_81487854_81487943_81489251_81489315_81490387_81490466_81492479_81492549_81495080_81495138_81497891_81498047_81498412_81498495_81499458_81499519_81499608_81499663_81502720_81502884_81504200_81504307_81506073_81506242_81526732_81526965_81527700_81527739_81533674
transcript_60680.known	chr14	+	1294	2	FSM	ENSG00000258743.7	ENST00000670297.1	1294	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTTACATGGGTTTTGA	82642470	True	NA	NA	False	ATTAAA	-2	NA	82642621	82652164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_82642675_82650923
transcript_60681.known	chr14	+	6788	2	FSM	ENSG00000185070.12	ENST00000683129.1	6788	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCAGTAAAGTCTTATTT	85533905	False	NA	NA	False	NA	NA	NA	85533960	85627893	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_85533994_85621138
transcript_60686.known	chr14	-	3794	17	FSM	ENSG00000054983.17	ENST00000261304.7	3794	17	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_6	12.9638921624642	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGTGTCAAATATATTT	-87992219	True	NA	-2	True	ATTAAA	-18	NA	87993182	87933013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_87934879_87939904_87939982_87941394_87941559_87945552_87945734_87947727_87947879_87949844_87949932_87950658_87950749_87963383_87963512_87965504_87965630_87968334_87968491_87976357_87976489_87982204_87982244_87984393_87984534_87986488_87986603_87988143_87988208_87988454_87988524_87992969
transcript_60690.known	chr14	-	1221	10	FSM	ENSG00000054983.17	ENST00000622264.4	1221	10	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_9	11.3442213494224	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTTGTTTTACATGTAA	-87992191	True	NA	2	True	AATAAA	-14	NA	87993154	87963313	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_87963512_87965504_87965630_87968334_87968491_87976357_87976489_87982204_87982244_87984393_87984534_87986488_87986603_87988143_87988208_87988454_87988524_87992969
transcript_60692.known	chr14	-	2396	7	FSM	ENSG00000100433.16	ENST00000312350.9	2396	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1.86338998124982	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACAAACACATCACACTGT	-88270896	True	NA	NA	False	AAGAAA	-9	NA	88270911	88184892	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_88186156_88187966_88188110_88192223_88192411_88227374_88227536_88240702_88240821_88263201_88263552_88270737
transcript_60695.known	chr14	-	7530	7	FSM	ENSG00000100433.16	ENST00000319231.10	7530	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1.86338998124982	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAATGTCTCTTCTGTTTT	-88323232	True	NA	NA	False	NA	NA	NA	88323269	88180107	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_88186156_88187966_88188110_88192223_88192411_88227374_88227536_88240702_88240821_88263201_88263552_88322746
transcript_60696.known	chr14	-	6443	19	FSM	ENSG00000070778.13	ENST00000556564.6	6443	19	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_15	7.91622805802528	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCTTTGAAATAGTATC	-88554800	True	NA	-3	True	AATAAA	-16	NA	88555007	88465777	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_88468266_88468915_88469077_88469498_88469734_88469921_88470051_88472243_88472466_88473664_88473803_88478919_88480353_88485075_88485161_88485781_88485843_88496412_88496493_88497202_88497291_88500782_88500872_88501280_88501369_88504424_88504496_88505303_88505372_88507922_88508021_88517091_88517262_88550237_88550620_88554650
transcript_60698.known	chr14	+	2000	12	FSM	ENSG00000042317.17	ENST00000393545.9	2000	12	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	10.560334329794	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTACTTTTCTTCCTTTTT	88384880	True	NA	14	True	AATAAA	-25	NA	88385656	88438460	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_88385838_88391380_88391456_88393392_88393489_88396155_88396204_88416710_88416845_88426231_88426705_88427629_88427697_88429347_88429464_88431171_88431226_88433134_88433213_88437542_88437598_88437837
transcript_6070.nnic	chr1	-	1520	7	NNC	ENSG00000184007.22	novel	3910	6	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	624.541075955422	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAGAGAAAAGGAATTAA	-31925274	True	NA	-18	True	AATAAA	-15	NA	31938390	31908652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_31908961_31910037_31910113_31911695_31911827_31915894_31915988_31918969_31919659_31937986_31938075_31938254
transcript_60700.known	chr14	+	1891	11	FSM	ENSG00000042317.17	ENST00000356583.9	1891	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	9.51262319236918	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTACTTTTCTTCCTTT	88384891	True	NA	12	True	AATAAA	-23	NA	88385667	88438458	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_88385838_88391380_88391456_88396155_88396204_88416710_88416845_88426231_88426705_88427629_88427697_88429347_88429464_88431171_88431226_88433134_88433213_88437542_88437598_88437837
transcript_60701.known	chr14	+	890	7	FSM	ENSG00000042317.17	ENST00000555534.5	890	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	17.3533538225004	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCAGTGGGGATCTTTTG	88384872	True	NA	NA	False	NA	NA	NA	88385648	88426517	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_88385838_88391380_88391456_88393392_88393489_88396155_88396204_88415204_88415267_88416710_88416845_88426231
transcript_60704.known	chr14	+	2301	12	FSM	ENSG00000042317.17	ENST00000556553.5	2301	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.3552962839192	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTACTTTTCTTCCTTTTT	NA	False	NA	14	True	AATAAA	-25	NA	88384923	88438460	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_88385062_88385397_88385838_88391380_88391456_88396155_88396204_88416710_88416845_88426231_88426705_88427629_88427697_88429347_88429464_88431171_88431226_88433134_88433213_88437542_88437598_88437837
transcript_60708.known	chr14	+	18153	17	FSM	ENSG00000100722.20	ENST00000251038.10	18153	17	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_10	113.812328390865	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTATTCTTGTTTTTT	88552895	True	NA	NA	False	ATTAAA	-17	NA	88563036	88627596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88596733_88596809_88601923_88602084_88602827_88603061_88607242_88607364_88609266_88609404_88609711_88609804_88610833_88610941_88611744
transcript_6071.nnic	chr1	-	1520	7	NNC	ENSG00000184007.22	novel	3910	6	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	624.541075955422	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAGAGAAAAGGAATTAA	-31925276	True	NA	-18	True	AATAAA	-15	NA	31938392	31908652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_31908961_31910037_31910113_31911695_31911827_31915894_31915988_31918969_31919659_31937986_31938081_31938262
transcript_60711.known	chr14	+	2529	17	FSM	ENSG00000100722.20	ENST00000555755.5	2529	17	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_12	168.697850738384	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCTGTTAAAATATTTG	88552896	True	NA	NA	False	NA	NA	NA	88563037	88611991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88596733_88596809_88601923_88602084_88602827_88603046_88607242_88607364_88609266_88609404_88609714_88609804_88610833_88610941_88611744
transcript_60722.known	chr14	+	2195	16	FSM	ENSG00000100722.20	ENST00000393514.9	2195	16	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_9	161.676989361161	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACTCTACAGAACTTGTC	88552992	False	NA	-44	True	NA	NA	NA	88563133	88611810	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88601923_88602084_88602827_88603061_88607242_88607364_88609266_88609404_88609711_88609804_88610833_88610941_88611744
transcript_60733.known	chr14	+	2075	15	FSM	ENSG00000100722.20	ENST00000556945.5	2075	15	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_10	139.927751036755	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATCTGAAGTGTCTAATT	88552868	True	NA	30	True	AATATA	-32	NA	88563009	88611884	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88596733_88596809_88607242_88607364_88609266_88609404_88609711_88609804_88610833_88610941_88611744
transcript_60736.nic	chr14	+	2122	15	NIC	ENSG00000100722.20	novel	2529	17	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	156	junction_10	152.233591321136	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGAAGTGTCTAATTTT	88552820	True	NA	32	True	AATATA	-34	NA	88562961	88611886	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88596733_88596809_88607242_88607364_88609266_88609404_88609714_88609804_88610833_88610941_88611744
transcript_60737.nic	chr14	+	3215	15	NIC	ENSG00000100722.20	novel	2529	17	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	156	junction_10	152.233591321136	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTTCA	88552820	True	NA	22	True	AATAAA	-35	NA	88562961	88612979	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88596733_88596809_88607242_88607364_88609266_88609404_88609714_88609804_88610833_88610941_88611744
transcript_60741.nic	chr14	+	2050	14	NIC	ENSG00000100722.20	novel	2075	15	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	105	junction_9	154.342468663476	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGAAGTGTCTAATTTT	88552820	True	NA	32	True	AATATA	-34	NA	88562961	88611886	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88607242_88607364_88609266_88609404_88609711_88609804_88610833_88610941_88611744
transcript_60742.nic	chr14	+	3143	14	NIC	ENSG00000100722.20	novel	2195	16	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	105	junction_9	154.342468663476	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTTCA	88552820	True	NA	22	True	AATAAA	-35	NA	88562961	88612979	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88607242_88607364_88609266_88609404_88609711_88609804_88610833_88610941_88611744
transcript_60744.known	chr14	+	2560	14	FSM	ENSG00000100722.20	ENST00000302216.12	2560	14	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_9	166.512859996995	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCAGAAAATAGGAACAGTT	88552828	True	NA	NA	False	NA	NA	NA	88562969	88612407	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88607242_88607364_88609266_88609404_88609714_88609804_88610833_88610941_88611744
transcript_60750.known	chr14	+	1983	13	FSM	ENSG00000100722.20	ENST00000557607.5	1983	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	254.135612857038	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATTTGGGGCATGTTT	88552872	True	NA	NA	False	NA	NA	NA	88563013	88612001	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_88563170_88563650_88563694_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88607242_88607364_88609266_88609404_88609726_88609804_88610833_88610941_88611744
transcript_60751.nic	chr14	+	1507	9	ISM	ENSG00000100722.20	ENST00000556945.5	2075	15	-103	33743	-63	0	5prime_fragment	FALSE	canonical	3	523	junction_6	49.7669569091782	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAACTTAAATGATGTTT	NA	False	NA	NA	False	ATTAAA	-42	NA	88562906	88578141	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984
transcript_60753.known	chr14	+	2183	15	FSM	ENSG00000165533.19	ENST00000380656.7	2183	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	23.7499731471384	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTCATTATTTTTTAAT	88823584	True	NA	16	True	AATAAA	-19	NA	88824650	88877988	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_88824822_88833692_88833723_88839451_88839573_88840864_88840929_88841036_88841197_88841424_88841515_88843805_88843851_88852970_88853057_88857189_88857278_88861221_88861333_88870058_88870199_88871548_88871724_88872329_88872453_88875025_88875110_88877293
transcript_60754.known	chr14	+	5270	14	FSM	ENSG00000165533.19	ENST00000622513.4	5270	14	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	15.7772962488215	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTGTGTTTTTTTTTT	88823557	True	NA	NA	False	ATTAAA	-13	NA	88824623	88881078	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_88824822_88839451_88839573_88840864_88840929_88841036_88841197_88841424_88841515_88843805_88843851_88852970_88853057_88857189_88857278_88861221_88861333_88870058_88870199_88871548_88871724_88872329_88872453_88875025_88875110_88877293
transcript_60757.known	chr14	+	2058	13	FSM	ENSG00000165533.19	ENST00000346301.8	2058	13	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	9.14201229975594	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTCATTATTTTTTAAT	88823589	True	NA	16	True	AATAAA	-19	NA	88824655	88877988	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_88824822_88839451_88839573_88840864_88840929_88841036_88841197_88843805_88843851_88852970_88853057_88857189_88857278_88861221_88861333_88870058_88870199_88871548_88871724_88872329_88872453_88875025_88875110_88877293
transcript_60758.known	chr14	+	1859	12	FSM	ENSG00000165533.19	ENST00000554686.5	1859	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_11	14.8652348320358	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTTTAAAATAAATCATTG	88823672	True	NA	-16	True	ATTAAA	-21	NA	88824738	88877956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_88824822_88839451_88839573_88840864_88840929_88841036_88841197_88843805_88843851_88852970_88853057_88857189_88857278_88861221_88861333_88870058_88870199_88871548_88871724_88872329_88872453_88877293
transcript_60765.nic	chr14	-	2762	8	NIC	ENSG00000053254.16	novel	7832	7	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_2	61.0663740598402	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACTAGA	-89612695	True	NA	6	True	NA	NA	NA	89619185	89161399	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_89162970_89180700_89180807_89190383_89190450_89280949_89281015_89350671_89350809_89411933_89412491_89486568_89486672_89619027
transcript_60769.nic	chr14	-	2529	8	NIC	ENSG00000053254.16	novel	7832	7	NA	NA	-36	-233	combination_of_known_junctions	FALSE	canonical	3	40	junction_2	61.0663740598402	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATAAGCCTGAAGATTGG	-89612695	True	NA	-5	True	ATTAAA	-20	NA	89619185	89161632	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_89162970_89180700_89180807_89190383_89190450_89280949_89281015_89350671_89350809_89411933_89412491_89486568_89486672_89619027
transcript_60770.nic	chr14	-	3277	7	NIC	ENSG00000053254.16	novel	7832	7	NA	NA	-341	237	combination_of_known_junctions	FALSE	canonical	3	44	junction_6	54.7623654224931	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACAAAAACAAACTTTTTT	-89619406	False	NA	NA	False	AAAAAG	-16	NA	89619490	89161123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_89162970_89180700_89180807_89280949_89281015_89350671_89350809_89411933_89412491_89486568_89486672_89619027
transcript_60772.nic	chr14	-	2809	7	NIC	ENSG00000053254.16	novel	7832	7	NA	NA	-32	78	combination_of_known_junctions	FALSE	canonical	3	44	junction_6	54.7623654224931	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCCTATACTGCCCTCA	-89612691	True	NA	64	True	AATAAA	-2	NA	89619181	89161282	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_89162970_89180700_89180807_89280949_89281015_89350671_89350809_89411933_89412491_89486568_89486672_89619027
transcript_60776.nic	chr14	-	3134	7	NIC	ENSG00000053254.16	novel	7832	7	NA	NA	-474	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_6	54.7623654224931	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACTAGA	NA	False	NA	6	True	NA	NA	NA	89619623	89161399	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_89162970_89180700_89180807_89280949_89281015_89350671_89350809_89411933_89412491_89486568_89486672_89619027
transcript_60779.nic	chr14	-	2501	7	NIC	ENSG00000053254.16	novel	7832	7	NA	NA	-74	-233	combination_of_known_junctions	FALSE	canonical	3	44	junction_6	54.7623654224931	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATAAGCCTGAAGATTGG	-89619139	False	NA	-5	True	ATTAAA	-20	NA	89619223	89161632	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_89162970_89180700_89180807_89280949_89281015_89350671_89350809_89411933_89412491_89486568_89486672_89619027
transcript_60788.known	chr14	-	2421	5	FSM	ENSG00000053254.16	ENST00000615335.4	2421	5	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	36.9932426261878	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACTAGA	-89411909	False	NA	6	True	NA	NA	NA	89412476	89161399	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_89162970_89180700_89180807_89280949_89281015_89350671_89350809_89411933
transcript_60790.known	chr14	+	1077	2	FSM	ENSG00000258920.1	ENST00000555562.1	1077	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACTGTATTGGTTATTAG	89417090	True	NA	NA	False	NA	NA	NA	89417353	89419793	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_89417797_89419159
transcript_60796.known	chr14	-	3136	6	FSM	ENSG00000140025.16	ENST00000316738.12	3136	6	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_5	9.48683298050514	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGATCAATGGTATCATTG	-89951924	True	NA	NA	False	AATAAA	-20	NA	89954730	89794668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_89797325_89931540_89931632_89932525_89932628_89950096_89950143_89953905_89954002_89954585
transcript_60799.known	chr14	-	644	6	FSM	ENSG00000140025.16	ENST00000555608.5	644	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	51.361464153585	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCTTTGCCCCCATCAA	-89951935	True	NA	NA	False	NA	NA	NA	89954741	89831063	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_89831217_89931540_89931632_89932525_89932628_89950096_89950143_89953905_89954002_89954585
transcript_6080.known	chr1	-	3910	6	FSM	ENSG00000184007.22	ENST00000647444.2	3910	6	0	0	0	0	multi-exon	FALSE	canonical	3	1566	junction_5	73.9540397814751	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGCATTTTTTTCCTCC	-31925252	True	NA	-21	True	AATAAA	-18	NA	31938368	31906420	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_31908961_31910037_31910113_31911695_31911827_31915894_31915988_31918969_31919659_31937986
transcript_60802.known	chr14	+	3722	17	FSM	ENSG00000042088.14	ENST00000335725.9	3722	17	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	118.580141676421	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATTTAACCAGTTGATTT	89950090	True	NA	18	True	AATAAA	-18	NA	89955926	90044764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_89955971_89956577_89956801_89963107_89963674_89966146_89966191_89967366_89967423_89971174_89971272_89975780_89975816_89980539_89980633_89984515_89984684_89985131_89985211_89988904_89989091_89989716_89989766_89991916_89991984_89993375_89993484_90019315_90019419_90033105_90033215_90043069
transcript_60808.known	chr14	+	2068	16	FSM	ENSG00000042088.14	ENST00000393454.6	2068	16	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	79.1773255982348	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTATATGTTTTGGAAA	89950101	True	NA	7	True	AATAAA	-19	NA	89955937	90043344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_89955971_89963107_89963674_89966146_89966191_89967366_89967423_89971174_89971272_89975780_89975816_89980539_89980633_89984515_89984684_89985131_89985211_89988904_89989091_89989716_89989766_89991916_89991984_89993375_89993484_90019315_90019419_90033105_90033215_90043069
transcript_60811.nic	chr14	+	2342	16	NIC	ENSG00000042088.14	novel	2370	18	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_1	96.7470929795826	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTTTTATATGTTTTGG	89950132	True	NA	4	True	AATAAA	-16	NA	89955968	90043341	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_89956279_89963107_89963674_89966146_89966191_89967366_89967423_89971174_89971272_89975780_89975816_89980539_89980633_89984515_89984684_89985131_89985211_89988904_89989091_89989716_89989766_89991916_89991984_89993375_89993484_90019315_90019419_90033105_90033215_90043069
transcript_60820.known	chr14	+	910	7	FSM	ENSG00000042088.14	ENST00000554180.5	910	7	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	116.504172552841	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTCCAACCTCATCCATG	89950070	True	NA	NA	False	NA	NA	NA	89955906	89980587	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_89955971_89963107_89963674_89966146_89966191_89967366_89967423_89971174_89971272_89975780_89975816_89980539
transcript_60823.known	chr14	-	14008	14	FSM	ENSG00000119720.18	ENST00000354366.8	14008	14	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_7	5.92757072286415	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGAGTCTGTCTTGG	-90330602	True	NA	-6	True	AATAAA	-14	NA	90331941	90267859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_90278462_90279061_90279134_90286353_90286493_90288216_90289146_90290220_90290608_90292696_90292873_90298259_90298381_90301238_90301373_90302719_90303126_90303934_90304383_90312393_90312544_90316577_90316812_90318004_90318114_90331840
transcript_60827.known	chr14	+	4390	11	FSM	ENSG00000100764.14	ENST00000261303.13	4390	11	0	0	0	0	multi-exon	FALSE	canonical	3	1037	junction_1	274.025546254359	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATCAGTATTGCCTTTT	90241228	True	NA	NA	False	ATTAAA	-18	NA	90256552	90275429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_90256601_90259159_90259214_90260114_90260212_90263317_90263443_90263661_90263848_90264040_90264170_90265069_90265167_90268223_90268414_90269396_90269549_90270197_90270353_90272272
transcript_60832.known	chr14	+	1389	10	FSM	ENSG00000100764.14	ENST00000543772.2	1389	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	616.511772338614	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGCCCATTGGGTGGCC	90241253	True	NA	NA	False	AAAACA	-27	NA	90256577	90272550	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_90256601_90259159_90259214_90263317_90263443_90263661_90263848_90264040_90264170_90265069_90265167_90268223_90268414_90269396_90269549_90270197_90270353_90272272
transcript_60833.known	chr14	+	577	4	FSM	ENSG00000100764.14	ENST00000554624.5	577	4	0	0	0	0	multi-exon	FALSE	canonical	3	1037	junction_1	433.0573480114	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAGTGGATGATCTGAG	90241203	True	NA	NA	False	NA	NA	NA	90256527	90263670	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_90256601_90259159_90259214_90260114_90260212_90263317
transcript_60834.nic	chr14	-	367	3	ISM	ENSG00000119720.18	ENST00000354366.8	14008	14	-62	48857	-34	-130	5prime_fragment	FALSE	canonical	3	27	junction_1	5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGCATCAGCATCATAAG	-90330664	False	NA	NA	False	AAAAAG	-23	NA	90332003	90316716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_90316812_90318004_90318114_90331840
transcript_60835.known	chr14	+	1104	7	FSM	ENSG00000198668.14	ENST00000447653.8	1104	7	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	3680.97381438964	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATGAAAAATGAAAAAA	90321617	True	NA	-19	True	NA	NA	NA	90397028	90405072	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_90397234_90398990_90399088_90400064_90400096_90401258_90401403_90403861_90403969_90404378_90404515_90404688
transcript_60838.known	chr14	+	4203	6	FSM	ENSG00000198668.14	ENST00000356978.9	4203	6	0	0	0	0	multi-exon	FALSE	canonical	3	7896	junction_5	449.510222353174	1138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGAACTGTGTAGGTTTC	90321617	True	NA	39	True	AATAAA	-26	NA	90397028	90408268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_90397234_90400064_90400096_90401258_90401403_90403861_90403969_90404378_90404515_90404688
transcript_60842.known	chr14	+	877	6	FSM	ENSG00000198668.14	ENST00000553542.5	877	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	3312.26224807155	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCACAGTCAGGCCTTTG	90321644	True	NA	-43	True	AATACA	-43	NA	90397055	90405048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_90397155_90400064_90400096_90401258_90401403_90403861_90403969_90404378_90404515_90404688
transcript_60845.known	chr14	+	1420	5	FSM	ENSG00000198668.14	ENST00000553630.1	1420	5	0	0	0	0	multi-exon	FALSE	canonical	1	94	junction_3	3719.32984555014	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAAAGTGGTGTTAAATG	90321628	True	NA	57	True	AATAAA	-11	NA	90397039	90405603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_90397234_90400064_90400096_90401258_90401403_90404378_90404515_90404688
transcript_60847.known	chr14	+	583	4	FSM	ENSG00000198668.14	ENST00000553995.5	583	4	0	0	0	0	multi-exon	FALSE	canonical	3	8332	junction_3	335.098327195002	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCCTGAGCCTCTGATC	90321620	True	NA	NA	False	NA	NA	NA	90397031	90404067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_90397234_90400064_90400096_90401258_90401403_90403861
transcript_60849.known	chr14	+	588	3	FSM	ENSG00000198668.14	ENST00000556757.5	588	3	0	0	0	0	multi-exon	FALSE	canonical	3	8809	junction_2	170	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTCTTCCTGCTTGGT	90321620	True	NA	NA	False	NA	NA	NA	90397031	90401613	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_90397234_90400064_90400096_90401258
transcript_60851.known	chr14	-	19471	20	FSM	ENSG00000165914.15	ENST00000328459.11	19471	20	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_13	7.93707943244223	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCCTTGGGATTTTTC	-90815366	True	NA	NA	False	AATAAA	-17	NA	90816430	90524563	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_90541590_90578105_90578309_90593485_90593627_90610741_90610840_90617928_90618046_90644047_90644209_90646950_90647024_90652840_90652899_90654992_90655111_90657173_90657279_90658303_90658388_90676522_90676661_90680471_90680536_90689539_90689713_90695499_90695579_90730074_90730197_90744791_90744923_90780737_90780907_90786173_90786329_90816174
transcript_60853.known	chr14	-	703	4	FSM	ENSG00000258884.3	ENST00000659138.2	706	4	3	0	3	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATGCCTTCTTACTCTTG	-90828171	True	NA	NA	False	NA	NA	NA	90828199	90820063	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_90820366_90821686_90821745_90823021_90823154_90827988
transcript_60854.known	chr14	-	26829	17	FSM	ENSG00000100784.12	ENST00000614987.5	26829	17	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_6	4.7169905660283	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGACTTGGACTTGTGG	-91060095	True	NA	NA	False	AATAAA	-24	NA	91060641	90847860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_90872323_90873631_90873796_90875200_90875361_90890486_90890679_90894412_90894584_90899328_90899423_90900107_90900242_90900610_90900737_90902807_90902970_90906148_90906300_90920205_90920310_90923112_90923197_90943077_90943186_90947434_90947551_90978305_90978525_91001087_91001160_91060331
transcript_60863.known	chr14	+	2764	16	FSM	ENSG00000133943.21	ENST00000523816.5	2764	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	37.636861364005	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTACTCTTCGGAATAT	91113603	True	NA	23	True	AATAAA	-19	NA	91114389	91225355	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_91114529_91145220_91145314_91147780_91147859_91157638_91157691_91160265_91160398_91167224_91167379_91170002_91170187_91173288_91173440_91175933_91176057_91181185_91181390_91188909_91189171_91196374_91196475_91199756_91199906_91204705_91204826_91215404_91215557_91224683
transcript_60866.nic	chr14	+	2807	15	NIC	ENSG00000133943.21	novel	2719	15	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	30.4124705893313	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTACTCTTCGGAATAT	91114021	True	NA	23	True	AATAAA	-19	NA	91114038	91225355	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_91114284_91145220_91145314_91157638_91157691_91160265_91160398_91167224_91167379_91170002_91170202_91173288_91173440_91175933_91176057_91181185_91181390_91188909_91189171_91196374_91196475_91199756_91199906_91204705_91204826_91215404_91215557_91224683
transcript_60877.nic	chr14	+	2945	14	NIC	ENSG00000133943.21	novel	2435	13	NA	NA	-104	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	25.5053074880342	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTACTCTTCGGAATAT	91060102	True	NA	23	True	AATAAA	-19	NA	91060228	91225355	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_91060705_91157638_91157691_91160265_91160398_91167224_91167379_91170002_91170202_91173288_91173440_91175933_91176057_91181185_91181390_91188909_91189171_91196374_91196475_91199756_91199906_91204705_91204826_91215404_91215557_91224683
transcript_60880.nic	chr14	+	2660	14	NIC	ENSG00000133943.21	novel	2814	16	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	26.7930928129846	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTACTCTTCGGAATAT	91114039	False	NA	23	True	AATAAA	-19	NA	91114056	91225355	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_91114284_91157638_91157691_91160265_91160398_91167224_91167379_91170002_91170202_91173288_91173404_91175933_91176057_91181185_91181390_91188909_91189171_91196374_91196475_91199756_91199906_91204705_91204826_91215404_91215557_91224683
transcript_60883.known	chr14	+	2957	14	FSM	ENSG00000133943.21	ENST00000256324.15	2957	14	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	18.9146322620734	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGAAAGTCTTTTTTTTTG	91113578	True	NA	NA	False	CATAAA	-21	NA	91114072	91225632	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_91114284_91157638_91157691_91160265_91160398_91167224_91167379_91170002_91170202_91173288_91173440_91175933_91176057_91181185_91181390_91188909_91189171_91196374_91196475_91199756_91199906_91204705_91204826_91215404_91215557_91224683
transcript_60887.known	chr14	+	2538	14	FSM	ENSG00000133943.21	ENST00000428926.6	2538	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	29.7253701934239	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTGTACTCTTCGGAA	91113655	False	NA	20	True	AATAAA	-16	NA	91114441	91225352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_91114529_91157638_91157691_91160265_91160398_91167224_91167379_91170002_91170187_91173288_91173440_91175933_91176057_91181185_91181390_91188909_91189171_91196374_91196475_91199756_91199906_91204705_91204826_91215404_91215557_91224683
transcript_60901.known	chr14	+	959	7	FSM	ENSG00000133943.21	ENST00000518665.6	959	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	45.7192519623845	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCCAGAGACAGAGATATT	91113592	False	NA	3	True	AATAAA	-19	NA	91114086	91167721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_91114284_91145220_91145314_91147780_91147859_91157638_91157691_91160265_91160398_91167224_91167379_91167468
transcript_60903.known	chr14	+	550	5	FSM	ENSG00000133943.21	ENST00000524232.5	550	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	47.5210479682424	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATTCTGCCAGGTCAAC	91113570	True	NA	NA	False	NA	NA	NA	91114064	91167278	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_91114284_91145220_91145314_91157638_91157691_91160265_91160398_91167224
transcript_60908.known	chr14	+	622	3	FSM	ENSG00000133943.21	ENST00000521081.5	622	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	38.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAGAAATACATCCAGCAT	91113568	True	NA	NA	False	AAGAAA	-7	NA	91114062	91160369	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_91114529_91157638_91157691_91160265
transcript_60909.known	chr14	-	2859	2	FSM	ENSG00000119714.11	ENST00000531499.2	2859	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTTGGGAGTATGCTGCA	-91253908	True	NA	NA	False	AATAAA	-15	NA	91253925	91232531	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_91235180_91253714
transcript_60910.known	chr14	-	7519	30	FSM	ENSG00000015133.20	ENST00000389857.11	7519	30	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_23	23.5490229177454	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCGTTCTGGCTTTCCTCA	-91414898	True	NA	-16	True	AATAAA	-17	NA	91417820	91271322	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_91273654_91277921_91278212_91279237_91279307_91281456_91281526_91283328_91283518_91289104_91289344_91290994_91291085_91294172_91294319_91297304_91297492_91299926_91300071_91303700_91303979_91305764_91305927_91307037_91307227_91308350_91308493_91309858_91309987_91313079_91314151_91315649_91315788_91321119_91321305_91324778_91324924_91325909_91326057_91338004_91338164_91338488_91338571_91339277_91339463_91339883_91340025_91342379_91342464_91343598_91343658_91359641_91359712_91408658_91408768_91416737_91416839_91417630
transcript_60913.nic	chr14	-	4321	24	ISM	ENSG00000015133.20	ENST00000389857.11	7519	30	-56	19739	-32	-2330	5prime_fragment	FALSE	canonical	3	34	junction_17	20.829399754671	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACATAAGGAAAAGCTGGAA	-91414954	True	NA	-9	True	ATTAAA	-12	NA	91417876	91291061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_91291085_91294172_91294319_91297304_91297492_91299926_91300071_91303700_91303979_91305764_91305927_91307037_91307227_91308350_91308493_91309858_91309987_91313079_91314151_91315649_91315788_91321119_91321305_91324778_91324924_91325909_91326057_91338004_91338164_91338488_91338571_91339277_91339463_91339883_91340025_91342379_91342464_91343598_91343658_91359641_91359712_91408658_91408768_91416737_91416839_91417630
transcript_60919.nic	chr14	-	3396	17	ISM	ENSG00000015133.20	ENST00000389857.11	7519	30	-333	37101	-309	5519	5prime_fragment	FALSE	canonical	3	34	junction_10	7.47495819386303	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTGCTCTTAGAAGCAC	-91418116	True	NA	13	True	ATTAAA	-28	NA	91418153	91308423	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_91308493_91309858_91309987_91313079_91314151_91315649_91315788_91321119_91321305_91324778_91324924_91325909_91326057_91338004_91338164_91338488_91338571_91339277_91339463_91339883_91340025_91342379_91342464_91343598_91343658_91359641_91359712_91408658_91408768_91416737_91416839_91417630
transcript_60927.known	chr14	-	1651	4	FSM	ENSG00000015133.20	ENST00000553403.1	1651	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	19.8662192343351	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACTACATAAAAAAGAGC	-91414922	True	NA	NA	False	NA	NA	NA	91417844	91378658	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_91379886_91408658_91408768_91416737_91416839_91417630
transcript_60937.nic	chr14	-	3906	16	NIC	ENSG00000100796.18	novel	4108	15	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_15	152.918918239555	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATTAGTTGTATGTTTC	-91507280	False	NA	-20	True	AATAAA	-25	NA	91510312	91457610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_91458870_91461380_91461608_91462048_91462240_91462734_91462878_91465249_91465420_91470836_91470996_91473032_91473136_91473238_91473371_91475849_91475967_91476407_91476525_91476908_91476987_91481575_91482194_91485631_91485731_91490746_91490803_91509505_91509705_91510074
transcript_60943.nic	chr14	-	4187	16	NIC	ENSG00000100796.18	novel	4416	15	NA	NA	-2	0	intron_retention	FALSE	canonical	3	59	junction_6	191.136065554242	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGGTCATTTGTGTCAT	NA	False	NA	-22	True	ATTAAA	-18	NA	91510556	91458138	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_91458870_91461380_91461608_91462048_91462240_91462734_91462878_91465249_91465420_91466260_91466417_91470836_91470996_91473032_91473136_91473238_91473371_91475810_91475967_91476407_91476525_91476908_91476987_91481575_91482194_91485631_91485731_91490746_91490803_91509505
transcript_60947.known	chr14	-	4416	15	FSM	ENSG00000100796.18	ENST00000554943.6	4416	15	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_8	108.982047763354	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCACCTGTCACCTTATT	-91507278	False	NA	-5	True	AATAAA	-16	NA	91510310	91457507	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_91458870_91461380_91461608_91462048_91462240_91462734_91462878_91465249_91465420_91470836_91470996_91473032_91473136_91473238_91473371_91475810_91475967_91476407_91476525_91476908_91476987_91481575_91482194_91485631_91485731_91490746_91490803_91509505
transcript_60948.known	chr14	-	4108	15	FSM	ENSG00000100796.18	ENST00000554684.5	4108	15	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_8	94.5284753556367	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATTAGTTGTATGTTTC	-91507112	False	NA	-20	True	AATAAA	-25	NA	91510144	91457610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_91458870_91461380_91461608_91462048_91462240_91462734_91462878_91465249_91465420_91470836_91470996_91473032_91473136_91473238_91473371_91475849_91475967_91476407_91476525_91476908_91476987_91481575_91482194_91485631_91485731_91490746_91490803_91509505
transcript_60969.nic	chr14	-	3068	13	ISM	ENSG00000100796.18	ENST00000554943.6	4416	15	-246	4546	-2	0	5prime_fragment	FALSE	canonical	3	254	junction_6	106.509258856788	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATGTATGTTGGAAAAAA	NA	False	NA	NA	False	AGTAAA	-15	NA	91510556	91462053	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_91462240_91462734_91462878_91465249_91465420_91470836_91470996_91473032_91473136_91473238_91473371_91475810_91475967_91476407_91476525_91476908_91476987_91481575_91482194_91485631_91485731_91490746_91490803_91509505
transcript_60970.known	chr14	-	2953	13	FSM	ENSG00000100796.18	ENST00000554390.5	2953	13	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_6	90.0402302060338	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATGTATGTTGGAAAAAA	-91507448	False	NA	NA	False	AGTAAA	-15	NA	91510480	91462053	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_91462240_91462734_91462878_91465249_91465420_91470836_91470996_91473032_91473136_91473238_91473371_91475849_91475967_91476407_91476525_91476908_91476987_91481575_91482194_91485631_91485731_91490746_91490803_91509505
transcript_60980.known	chr14	-	4708	12	FSM	ENSG00000165929.13	ENST00000340892.9	4708	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_11	19.8760622669499	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATATTTCTTTCTGTGTT	-91836058	False	NA	-79	True	AATAAA	-43	NA	91836440	91780178	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_91783211_91785161_91785362_91787512_91787628_91792366_91792559_91797784_91797902_91798298_91798400_91798988_91799065_91800280_91800373_91802253_91802422_91812311_91812546_91813702_91813826_91836182
transcript_60981.known	chr14	-	3751	12	FSM	ENSG00000165929.13	ENST00000360594.9	3751	12	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_11	7.2738635475991	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTTTCAGGTACAGAAGT	-91836065	True	NA	-1	True	AATAAA	-31	NA	91836447	91780954	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_91783211_91785161_91785362_91787512_91787628_91792366_91792559_91797784_91797902_91798298_91798400_91798988_91799065_91800280_91800373_91802253_91802422_91812311_91812546_91813702_91813826_91836370
transcript_60992.known	chr14	-	1770	11	FSM	ENSG00000165929.13	ENST00000556018.5	1770	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	24.9889975789346	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATATCAACCATAGATAG	NA	False	NA	-18	True	AATAAA	-15	NA	91836526	91782822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_91783211_91785161_91785362_91787512_91787628_91797784_91797902_91798298_91798400_91798988_91799065_91800280_91800373_91802253_91802422_91812311_91812546_91813702_91813826_91836370
transcript_60994.known	chr14	-	2625	11	FSM	ENSG00000140092.15	ENST00000342058.9	2625	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	3.85227205685164	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTGTTTGGTTCATTTT	-91947497	True	NA	-1	True	ATTAAA	-13	NA	91947694	91869410	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_91870386_91877486_91877683_91881291_91881419_91882953_91883077_91887192_91887313_91891220_91891338_91894949_91895073_91936946_91937202_91940564_91940617_91942906_91942962_91947212
transcript_60999.nic	chr14	-	1937	11	ISM	ENSG00000100815.12	ENST00000267622.8	9996	21	5	40417	5	9425	5prime_fragment	FALSE	canonical	3	53	junction_5	6.51229606206597	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGGAGATAGCATCATCA	-92036932	True	NA	NA	False	GATAAA	-25	NA	92040054	92006407	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_92006449_92007639_92007853_92010985_92011073_92011754_92011796_92014214_92014578_92015695_92015862_92017681_92017751_92021555_92021832_92025309_92025421_92033191_92033254_92039546
transcript_61.known	ERCC-00163	+	527	1	FSM	ERCC-00163A	DQ668359	527	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00163_+_0_500
transcript_61003.nic	chr14	-	1412	7	ISM	ENSG00000100815.12	ENST00000267622.8	9996	21	-10	48382	-10	1460	5prime_fragment	FALSE	canonical	3	53	junction_1	7.24377127070024	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGACAAATAATGGAAGAAT	-92036947	True	NA	5	True	NA	NA	NA	92040069	92014372	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_92014578_92015695_92015862_92017681_92017751_92021555_92021832_92025309_92025421_92033191_92033254_92039546
transcript_61004.nic	chr14	-	1347	7	ISM	ENSG00000100815.12	ENST00000267622.8	9996	21	-10	48447	-10	1395	5prime_fragment	FALSE	canonical	3	53	junction_1	7.24377127070024	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCTTCTGCAGAAAATGA	-92036947	True	NA	-60	True	AATAAA	-17	NA	92040069	92014437	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_92014578_92015695_92015862_92017681_92017751_92021555_92021832_92025309_92025421_92033191_92033254_92039546
transcript_61007.known	chr14	-	6950	12	FSM	ENSG00000066427.25	ENST00000545170.5	6950	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	94.1963835701029	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTTTGAATTTGTGTT	-92102995	True	NA	-10	True	AATAAA	-20	NA	92106621	92058551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_92064415_92070934_92071054_92080540_92080568_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92093745_92093832_92096092_92096138_92096673_92096839_92106528
transcript_61013.known	chr14	-	6884	11	FSM	ENSG00000066427.25	ENST00000644486.2	6884	11	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	41.9238595551507	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTTTGAATTTGTGTT	-92102956	True	NA	-10	True	AATAAA	-20	NA	92106582	92058551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_92064415_92070934_92071054_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92093745_92093832_92096092_92096138_92096673_92096839_92106528
transcript_61017.known	chr14	-	1205	10	FSM	ENSG00000066427.25	ENST00000340660.10	1205	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_9	78.7204775153639	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTAAATGTTTCTTTT	-92102984	True	NA	-10	True	ATTAAA	-14	NA	92106610	92064093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_92064415_92070934_92071054_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92093745_92093832_92096092_92096138_92106528
transcript_61018.known	chr14	-	1315	10	FSM	ENSG00000066427.25	ENST00000503767.5	1315	10	0	0	0	0	multi-exon	TRUE	canonical	1	18	junction_8	70.427267446636	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTAAATGTTTCTTTT	-92102974	True	NA	-10	True	ATTAAA	-14	NA	92106600	92064093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_92064415_92070934_92071054_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92093745_92093832_92096673_92096839_92106528
transcript_61020.known	chr14	-	1022	10	FSM	ENSG00000066427.25	ENST00000553309.5	1022	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	77.9982589232717	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTAAGGCCTGCTCACCA	-92102948	True	NA	NA	False	NA	NA	NA	92106574	92070937	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_92071054_92080952_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92093745_92093832_92096092_92096138_92096673_92096839_92106528
transcript_61023.known	chr14	-	6770	9	FSM	ENSG00000066427.25	ENST00000393287.9	6770	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_6	80.0327081573528	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTTTGAATTTGTGTT	-92102995	True	NA	-10	True	AATAAA	-20	NA	92106621	92058551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_92064415_92070934_92071054_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92096092_92096138_92096673_92096839_92106528
transcript_61025.known	chr14	-	848	9	FSM	ENSG00000066427.25	ENST00000556315.6	848	9	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_7	90.6151718808721	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGACCTATCAGGACAGAG	-92102948	True	NA	NA	False	NA	NA	NA	92106574	92071010	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_92071054_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92096092_92096135_92096673_92096839_92106528
transcript_61027.known	chr14	-	426	5	FSM	ENSG00000066427.25	ENST00000504047.1	426	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	113.263796069176	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGCAGCACAGAGCTGA	-92102965	True	NA	NA	False	NA	NA	NA	92106591	92093551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_92093619_92093745_92093832_92096092_92096138_92096673_92096839_92106528
transcript_61029.known	chr14	-	454	4	FSM	ENSG00000183648.11	ENST00000553514.5	454	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1243.50374167332	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTTCTTTTCATACAAAG	-92108475	True	NA	-3	True	AATAAA	-20	NA	92121724	92116121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_92116230_92117497_92117643_92118848_92118967_92121641
transcript_61032.known	chr14	-	417	3	FSM	ENSG00000183648.11	ENST00000617122.1	417	3	0	0	0	0	multi-exon	FALSE	canonical	3	2463	junction_2	100	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTCTTTCTTTTCATAC	-92121797	False	NA	-7	True	AATAAA	-16	NA	92121809	92116125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_92116230_92117497_92117643_92121641
transcript_61039.known	chr14	+	13003	16	FSM	ENSG00000165934.13	ENST00000298875.9	13003	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	65.593495612497	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGGACTGTGTATAGT	92117922	True	NA	1	True	AATAAA	-16	NA	92121968	92172145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_92122129_92126121_92126181_92130950_92131134_92134010_92134171_92134249_92134356_92135366_92135497_92138231_92138348_92142163_92142352_92143003_92143295_92154357_92154459_92155122_92155324_92156478_92156632_92157658_92157885_92158982_92159283_92161111_92161247_92161651
transcript_61053.nic	chr14	+	1928	10	ISM	ENSG00000165934.13	ENST00000298875.9	13003	16	-481	17734	-481	-742	5prime_fragment	FALSE	canonical	0	0	junction_1	62.7294799462022	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAACTAAAGAAAGAAGC	92121447	True	NA	NA	False	NA	NA	NA	92121487	92154411	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_92122129_92126121_92126181_92130950_92131134_92134010_92134171_92134249_92134356_92135366_92135497_92138231_92138348_92142163_92142352_92143003_92143295_92154357
transcript_61059.known	chr14	+	3852	10	FSM	ENSG00000100599.16	ENST00000216487.12	3852	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.46766367429494	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTTTCTGAAGGGGCTG	92513526	True	NA	8	True	AATAAA	-18	NA	92513780	92688994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_92513977_92555750_92555956_92577359_92577478_92615406_92615480_92641237_92641330_92651581_92653076_92659160_92659470_92676474_92676607_92684986_92685151_92687925
transcript_61061.known	chr14	+	2814	9	FSM	ENSG00000100599.16	ENST00000555589.5	2814	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.77284706819664	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCCGCAGGCGCACCGGC	92513538	True	NA	NA	False	NA	NA	NA	92513792	92688041	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_92513977_92555750_92555956_92577359_92577478_92641237_92641330_92651581_92653076_92659160_92659470_92676474_92676607_92684986_92685151_92687925
transcript_61065.known	chr14	-	1980	14	FSM	ENSG00000100600.15	ENST00000334869.9	1980	14	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_3	51.6643697396157	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCACGTCCGACACTGAC	-92745152	True	NA	-14	True	AATAAA	-21	NA	92748627	92703808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_92704362_92704639_92704708_92706482_92706654_92709671_92709873_92711658_92711749_92711836_92711956_92712804_92712872_92713822_92713886_92714375_92714452_92716135_92716222_92717379_92717462_92718746_92718845_92732648_92732816_92748488
transcript_61070.known	chr14	-	1797	13	FSM	ENSG00000100600.15	ENST00000557434.5	1797	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	137.562006221033	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAAGATTTATAAC	-92745170	True	NA	-44	True	NA	NA	NA	92748645	92703838	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_92704362_92704639_92704708_92709671_92709873_92711658_92711749_92711836_92711956_92712804_92712872_92713822_92713886_92714375_92714452_92716135_92716222_92717379_92717462_92718746_92718845_92732648_92732816_92748488
transcript_61073.known	chr14	-	1728	12	FSM	ENSG00000100600.15	ENST00000555699.5	1728	12	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	138.176435301853	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACGTCCGACACTGACTT	-92745137	True	NA	-12	True	AATAAA	-23	NA	92748612	92703806	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_92704362_92709671_92709873_92711658_92711749_92711836_92711956_92712804_92712872_92713822_92713886_92714375_92714452_92716135_92716222_92717379_92717462_92718746_92718845_92732648_92732816_92748488
transcript_61077.known	chr14	+	2879	13	FSM	ENSG00000066455.13	ENST00000163416.7	2879	13	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_3	18.6607133363712	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCTTTTCTAAAATAAT	92790545	True	NA	NA	False	AATAAA	-14	NA	92794304	92839947	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_92794457_92797407_92797982_92806735_92806964_92809299_92809520_92810253_92810378_92811550_92811755_92816250_92816422_92819707_92819837_92824545_92824645_92833121_92833348_92835558_92835665_92837385_92837450_92839365
transcript_61082.nic	chr14	+	2651	12	NIC	ENSG00000066455.13	novel	2879	13	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_11	59.5106768669037	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGTGACAAAAATAAAAAGT	92790558	True	NA	-18	True	NA	NA	NA	92794317	92839796	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_92794457_92797407_92797982_92806735_92806964_92809299_92809520_92810253_92810378_92811550_92811755_92816250_92816422_92819707_92819837_92824545_92824645_92833121_92833348_92835558_92835665_92839365
transcript_61092.known	chr14	+	1985	8	FSM	ENSG00000100604.13	ENST00000216492.10	1985	8	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_5	18.2208671582886	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGAATTTTTTCGCCTC	NA	False	NA	15	True	AATAAA	-18	NA	92923149	92935285	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_92923406_92924198_92924246_92926604_92926699_92927549_92927619_92929716_92929816_92931249_92931703_92932369_92932852_92934800
transcript_61106.known	chr14	-	6188	11	FSM	ENSG00000100605.17	ENST00000267615.11	6188	11	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_10	100.874625154198	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGAGGGTGTCCTTCTGTGC	NA	False	NA	0	True	AATAAA	-18	NA	93115925	92936913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_92941905_92946330_92946494_92951945_92952014_92958200_92958367_92962354_92962396_92962750_92962850_92993879_92993998_93016675_93016802_93076594_93076620_93115068_93115306_93115771
transcript_61115.known	chr14	-	2803	11	FSM	ENSG00000100605.17	ENST00000354313.7	2803	11	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_1	142.85268635906	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGAGGGTGTCCTTCTGTGC	NA	False	NA	0	True	AATAAA	-18	NA	93115918	92936913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_92938527_92946330_92946494_92951945_92952014_92958200_92958367_92962354_92962396_92962750_92962850_92993879_92993998_93016675_93016802_93076594_93076620_93115068_93115306_93115771
transcript_61116.known	chr14	-	3174	11	FSM	ENSG00000100605.17	ENST00000556603.6	3174	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_10	126.0499900833	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCCTCAGGTACGGGTG	-93115658	True	NA	-37	True	AATAAA	-37	NA	93115871	92939752	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_92941905_92946330_92946494_92951945_92952014_92958200_92958367_92962354_92962396_92962750_92962850_92993879_92993998_93016675_93016802_93076594_93076620_93115068_93115185_93115771
transcript_61139.known	chr14	-	3035	9	FSM	ENSG00000100605.17	ENST00000555495.5	3035	9	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_8	133.826146548423	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCACACGTGTTTACACAT	-93115066	False	NA	-23	True	AATAAA	-20	NA	93115279	92939861	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_92941905_92946330_92946494_92951945_92952014_92958200_92958367_92962354_92962396_92962750_92962850_92993879_92993998_93016675_93016802_93115068
transcript_6115.known	chr1	+	1989	11	FSM	ENSG00000121774.18	ENST00000484270.2	1989	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_9	745.591148016123	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGGTCCCACTCTGGTA	32013728	False	NA	4	True	AATAAA	-16	NA	32014181	32060850	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32014378_32030297_32030423_32031523_32031641_32033187_32033335_32036909_32037044_32037834_32038037_32038551_32038620_32039514_32039574_32042526_32042720_32045330_32045391_32060162
transcript_61152.known	chr14	-	2407	3	FSM	ENSG00000165943.5	ENST00000298894.5	2407	3	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTGTCTGTTTTGTTT	-93184012	True	NA	-22	True	AATAAA	-16	NA	93184897	93182198	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_93184363_93184558_93184714_93184809
transcript_61155.known	chr14	+	3494	11	FSM	ENSG00000012963.15	ENST00000013070.11	3494	11	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_2	18.3847763108502	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTTTCAGATTGTTTT	NA	False	NA	19	True	AATAAA	-15	NA	93207255	93229215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_93207442_93209823_93209958_93210647_93210709_93212031_93212128_93214928_93214983_93215175_93215282_93218526_93218736_93219211_93219362_93220248_93220412_93222312_93222375_93226942
transcript_61163.nic	chr14	+	3446	10	NIC	ENSG00000012963.15	novel	3494	11	NA	NA	-33	0	combination_of_known_junctions	TRUE	canonical	3	22	junction_3	84.2194370691642	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTTTCAGATTGTTTT	NA	False	NA	19	True	AATAAA	-15	NA	93207207	93229215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_93207442_93209823_93209958_93210647_93210709_93214928_93214983_93215175_93215282_93218526_93218736_93219211_93219362_93220248_93220412_93222312_93222375_93226942
transcript_61164.known	chr14	+	1276	10	FSM	ENSG00000012963.15	ENST00000553674.1	1276	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	88.1564266265118	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCCTTTCCGTCCTCCTCT	NA	False	NA	21	True	AATAAA	-22	NA	93207242	93227118	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_93207442_93210647_93210709_93212031_93212128_93214928_93214983_93215175_93215282_93218526_93218736_93219211_93219362_93220248_93220412_93222312_93222375_93226942
transcript_61173.known	chr14	+	909	2	FSM	ENSG00000153485.6	ENST00000283534.4	909	2	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTGGCTTGCTTTAAAA	93183358	True	NA	7	True	CATAAA	-18	NA	93184950	93187086	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_93185033_93186259
transcript_61174.known	chr14	+	2373	2	FSM	ENSG00000153485.6	ENST00000415050.3	2373	2	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTAGCATTTCTTTTCT	93183724	False	NA	NA	False	AATACA	-18	NA	93185316	93188463	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_93185486_93186259
transcript_61175.known	chr14	-	1125	2	FSM	ENSG00000170270.5	ENST00000306954.5	1125	2	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	0	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTGTGTGTGTTTCTT	NA	False	NA	-3	True	AATATA	-14	NA	93207065	93202893	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_93203783_93206829
transcript_61177.known	chr14	-	8445	11	FSM	ENSG00000011114.15	ENST00000334746.10	8445	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	9.4678403028357	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTGAGTTGGATACAGT	NA	False	NA	-5	True	AATAAA	-15	NA	93333036	93237549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_93243089_93245824_93246287_93248475_93248655_93251462_93251653_93253646_93253791_93257194_93257356_93261601_93261678_93263784_93263994_93293857_93294938_93295969_93296158_93332819
transcript_6118.known	chr1	+	1834	10	FSM	ENSG00000121775.18	ENST00000468135.5	1834	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	51.8309217016681	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTCCTGTGGTTCTT	32069477	True	NA	83	True	AAAAAG	-24	NA	32072968	32102866	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32073052_32074950_32075078_32075602_32075823_32076563_32076647_32076762_32076847_32077163_32077319_32091674_32092012_32094783_32094972_32100441_32100563_32102430
transcript_61181.known	chr14	-	2697	9	FSM	ENSG00000011114.15	ENST00000554565.5	2697	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	17.2477353585913	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACAAGCAGGCTGGCACT	NA	False	NA	NA	False	NA	NA	NA	93333039	93242032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_93243089_93245824_93246287_93248475_93248655_93251462_93251653_93253646_93253791_93257194_93257356_93261601_93261678_93263784_93263994_93332819
transcript_61185.known	chr14	-	2621	4	FSM	ENSG00000011114.15	ENST00000298896.7	2621	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	6.0184900284226	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATGGCTCTTGTGGTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	93333092	93287627	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_93288708_93293857_93294938_93295969_93296158_93332819
transcript_61191.known	chr14	+	8400	50	FSM	ENSG00000133958.13	ENST00000256339.8	8400	50	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.50711776991615	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTAGTGTTTTTTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	93333218	93707272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_93333524_93467670_93467792_93474247_93474394_93477557_93477729_93487662_93487756_93496410_93496467_93497156_93497287_93523977_93524043_93528557_93528647_93529285_93529327_93532549_93532579_93537988_93538219_93540659_93540832_93542465_93542697_93571893_93572085_93572692_93572817_93575057_93575199_93577841_93578064_93580148_93580377_93582202_93582345_93586595_93586676_93586759_93586909_93593679_93593838_93597358_93597541_93600568_93600771_93603238_93603419_93612796_93613084_93617121_93617305_93618191_93618355_93621620_93622842_93630800_93630909_93634520_93634638_93637215_93637300_93641144_93641248_93643556_93643698_93646607_93646647_93653741_93653855_93653939_93654026_93655233_93655408_93659192_93659262_93662603_93662715_93673350_93673456_93682616_93682695_93686571_93686662_93688664_93688841_93690116_93690304_93691748_93691947_93694334_93694413_93704624_93704667_93706703
transcript_61192.known	chr14	-	2168	3	FSM	ENSG00000100628.12	ENST00000553883.1	2168	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	3	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTGCCCAGTGAAGTCC	NA	False	NA	-8	True	AATAAA	-14	NA	93940495	93934166	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_93934793_93937697_93937852_93939107
transcript_612.nic	chr1	-	2634	16	NIC	ENSG00000127054.22	novel	2114	17	NA	NA	-37	0	intron_retention	FALSE	canonical	3	455	junction_8	43.6126383313624	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTACTTGGTACTCTCTTC	NA	False	NA	-19	True	AGTAAA	-13	NA	1324724	1311601	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_1311925_1312017_1312148_1312225_1312369_1312439_1312502_1312592_1312701_1312786_1312950_1313034_1313125_1313508_1313593_1313731_1313922_1314300_1314963_1315403_1315439_1315519_1315619_1319295_1319525_1320455_1320530_1320995_1321094_1324580
transcript_61200.known	chr14	-	2769	9	FSM	ENSG00000089737.18	ENST00000555054.1	2769	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_8	245.973544055047	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTTAAACTTGATTTC	-94072811	True	NA	19	True	NA	NA	NA	94081202	94050964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_94051463_94052997_94053128_94054995_94055185_94057821_94057898_94060097_94060614_94060912_94061067_94062096_94062622_94079024_94079622_94081118
transcript_61201.known	chr14	-	5573	9	FSM	ENSG00000089737.18	ENST00000621632.5	5573	9	0	0	0	0	multi-exon	FALSE	canonical	3	624	junction_8	78.8336856933633	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCAAAGCAACTCTCCT	-94072811	True	NA	NA	False	AATAAA	-20	NA	94081202	94048286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_94051463_94052997_94053128_94054995_94055185_94057821_94057898_94060097_94060614_94060912_94061067_94062096_94062622_94079024_94079748_94081118
transcript_61205.known	chr14	-	2214	8	FSM	ENSG00000089737.18	ENST00000544005.5	2214	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	263.137505762245	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATTGTGTCATCCTGAT	-94072811	True	NA	-20	True	ATTAAA	-13	NA	94081202	94050922	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_94051463_94052997_94053128_94054995_94055185_94057821_94057898_94060097_94060614_94060912_94061067_94062096_94062622_94081118
transcript_61207.known	chr14	-	5573	8	FSM	ENSG00000089737.18	ENST00000555762.1	5573	8	0	0	0	0	multi-exon	FALSE	canonical	3	624	junction_7	84.0585315996769	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTCATCCTGATTTT	-94072807	True	NA	-17	True	ATTAAA	-16	NA	94081198	94050919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_94051463_94052997_94053128_94054995_94057898_94060097_94060614_94060912_94061067_94062096_94062622_94079024_94079748_94081118
transcript_61212.known	chr14	+	3911	6	FSM	ENSG00000089723.10	ENST00000203664.10	3911	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	3.54400902933387	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTTTTGTCCTGGCTTCT	NA	False	NA	5	True	ATTAAA	-14	NA	94026339	94048930	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_94026541_94037379_94037476_94038962_94039082_94043970_94044056_94044585_94044781_94045715
transcript_61217.known	chr14	-	810	2	FSM	ENSG00000089737.18	ENST00000555324.1	810	2	0	0	0	0	multi-exon	FALSE	canonical	3	624	junction_1	0	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCAGATAATTGGGAGAGA	-94072755	True	NA	NA	False	NA	NA	NA	94081146	94078965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_94079748_94081118
transcript_61224.known	chr14	+	647	6	FSM	ENSG00000165948.11	ENST00000553664.1	647	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	72.4419767814214	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTAGTGTCGGTTCTCTG	94080333	True	NA	21	True	AATAAA	-16	NA	94081364	94102708	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_94081450_94088247_94088304_94096886_94096966_94100738_94100772_94101813_94101976_94102476
transcript_61227.known	chr14	+	647	5	FSM	ENSG00000165948.11	ENST00000555523.6	647	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	18.3507493035026	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGTGTCGGTTCTCTGT	94080278	True	NA	22	True	AATAAA	-17	NA	94081309	94102709	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_94081450_94096886_94096966_94100738_94100772_94101813_94101976_94102476
transcript_61228.nic	chr14	+	760	5	NIC	ENSG00000165948.11	novel	647	5	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_4	61.2107016787097	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGTGTCGGTTCTCTGT	NA	False	NA	22	True	AATAAA	-17	NA	94081280	94102709	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_94081450_94096886_94096966_94100738_94100772_94101813_94102060_94102476
transcript_6123.known	chr1	+	2713	9	FSM	ENSG00000121774.18	ENST00000327300.12	2713	9	0	0	0	0	multi-exon	FALSE	canonical	3	1557	junction_1	186.944510483726	2013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATGTGATGAATTGTCA	32001078	True	NA	NA	False	AATAAA	-23	NA	32013867	32043877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32014378_32030297_32030423_32031523_32031641_32033187_32033335_32036909_32037044_32037834_32038037_32038551_32038620_32039514_32039574_32042526
transcript_61230.nic	chr14	+	699	5	NIC	ENSG00000165948.11	novel	674	5	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_1	40.7944542799631	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGTGTCGGTTCTCTGT	NA	False	NA	22	True	AATAAA	-17	NA	94081288	94102709	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_94081450_94096855_94096966_94100738_94100772_94101813_94101976_94102476
transcript_61231.nic	chr14	+	783	5	NIC	ENSG00000165948.11	novel	674	5	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_4	63.5270611629406	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGTGTCGGTTCTCTGT	NA	False	NA	22	True	AATAAA	-17	NA	94081288	94102709	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_94081450_94096855_94096966_94100738_94100772_94101813_94102060_94102476
transcript_61237.known	chr14	+	828	3	FSM	ENSG00000165948.11	ENST00000557600.5	828	3	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	23	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTCTGGAGATTTTGGG	94080279	True	NA	NA	False	AAAACA	-36	NA	94081310	94101348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_94081450_94096886_94096966_94100738
transcript_61238.nic	chr14	+	2242	3	NIC	ENSG00000165948.11	novel	580	5	NA	NA	-12	0	intron_retention	FALSE	canonical	3	61	junction_1	56.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGTGTCGGTTCTCTGT	NA	False	NA	22	True	AATAAA	-17	NA	94081288	94102709	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_94081450_94096855_94096966_94100738
transcript_61239.known	chr14	+	674	5	FSM	ENSG00000165948.11	ENST00000393115.7	674	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	65.8540051933062	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGTGTCGGTTCTCTGT	94080297	True	NA	22	True	AATAAA	-17	NA	94081328	94102709	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_94081450_94096840_94096966_94100738_94100772_94101813_94101976_94102476
transcript_61245.known	chr14	-	451	4	FSM	ENSG00000119632.4	ENST00000238609.4	451	4	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_3	45.7626728046147	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCTGTTTTGCTTCTTG	-94126072	True	NA	-10	True	AATAAA	-18	NA	94129604	94127780	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_94127993_94128513_94128676_94129261_94129292_94129557
transcript_61247.known	chr14	-	516	3	FSM	ENSG00000119632.4	ENST00000555558.1	516	3	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_2	14	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTTTTGCTTCTTGCA	-94125869	False	NA	-8	True	AATAAA	-20	NA	94129401	94127778	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_94127993_94128513_94128676_94129261
transcript_61248.known	chr14	+	3857	25	FSM	ENSG00000119698.12	ENST00000304338.8	3857	25	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_15	4.66592255972314	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTGTGTTTGTGAAAAAA	NA	False	NA	28	True	AATAAA	-17	NA	94174321	94279734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_94174583_94176053_94176128_94208463_94208567_94230586_94230735_94231241_94231316_94233652_94233760_94234561_94234670_94237564_94237687_94240672_94240796_94241787_94241958_94242288_94242409_94244634_94244713_94245586_94245671_94246356_94246540_94250171_94250278_94251748_94251897_94256459_94256605_94258782_94258825_94259294_94259370_94264877_94264948_94265386_94265474_94265793_94265888_94266958_94267030_94275373_94275522_94278618
transcript_61251.known	chr14	-	1486	5	FSM	ENSG00000186910.4	ENST00000334708.4	1486	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.08972473588517	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTAAGGAGCAATCCTTAC	-94452755	False	NA	-25	True	AATAAA	-22	NA	94452800	94442463	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_94442810_94443077_94443226_94446330_94446605_94448131_94448778_94452728
transcript_61252.known	chr14	+	2278	6	FSM	ENSG00000188488.14	ENST00000329597.12	2278	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	2.41660919471891	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATAACTGTCTTTATGGA	94581273	True	NA	9	True	AATAAA	-18	NA	94581425	94593118	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_94581491_94581614_94581711_94587345_94587982_94590040_94590312_94590748_94590897_94592056
transcript_61253.known	chr14	+	2211	5	FSM	ENSG00000188488.14	ENST00000554866.5	2211	5	0	0	0	0	multi-exon	TRUE	canonical	3	6	junction_2	2.73861278752583	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTATAACTGTCTTTAT	94581241	True	NA	6	True	AATAAA	-15	NA	94581393	94593115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_94581491_94587345_94587982_94590040_94590312_94590748_94590897_94592056
transcript_61254.known	chr14	-	1140	3	FSM	ENSG00000133937.5	ENST00000238558.5	1140	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	1.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGGGCCACATTCTGTATT	-94769814	True	NA	-7	True	AATAAA	-15	NA	94770113	94768222	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_94768650_94768957_94769218_94769660
transcript_61256.known	chr14	-	7423	29	FSM	ENSG00000100697.15	ENST00000393063.6	7423	29	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_26	31.1437377005263	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAGCTCATTATTTCCA	-95157335	False	NA	NA	False	NA	NA	NA	95157420	95089246	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_95090664_95091033_95091110_95091202_95091366_95093887_95094157_95095824_95096714_95099779_95099936_95103345_95104127_95105070_95105247_95105677_95105784_95106040_95106224_95107607_95107762_95107879_95108094_95108323_95108504_95111316_95111457_95112171_95112248_95113091_95113225_95115666_95115822_95116452_95116696_95117621_95117755_95124195_95124669_95126579_95126749_95129471_95129633_95130057_95130193_95131508_95131640_95132514_95132678_95133314_95133504_95140658_95140760_95141682_95141749_95157229
transcript_61258.known	chr14	-	10384	27	FSM	ENSG00000100697.15	ENST00000343455.8	10384	27	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_26	19.3534548083217	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTCCTTTCATCTTT	-95157444	False	NA	-6	True	AATAAA	-16	NA	95157529	95086227	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_95090664_95091033_95091110_95091202_95091366_95093887_95094157_95095824_95096714_95099779_95099936_95103345_95104127_95105070_95105247_95105677_95105784_95106040_95106224_95107607_95107762_95107879_95108094_95108323_95108504_95111316_95111457_95112171_95112248_95113091_95113225_95115666_95115822_95116452_95116696_95117621_95117755_95124195_95124669_95126579_95126749_95129471_95129633_95130057_95130193_95131508_95131640_95132514_95132678_95133314_95133504_95157229
transcript_61263.nic	chr14	-	2090	10	ISM	ENSG00000100697.15	ENST00000556045.6	6161	28	-128	26011	-54	0	5prime_fragment	FALSE	canonical	3	83	junction_9	16.6807348033666	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGATACAGACAAAATAAAAA	-95157498	False	NA	NA	False	NA	NA	NA	95157583	95116513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_95116696_95117621_95117755_95124195_95124669_95126579_95126749_95129471_95129633_95130057_95130193_95131508_95131640_95132514_95132678_95133314_95133504_95157229
transcript_61269.known	chr14	+	723	4	FSM	ENSG00000235706.9	ENST00000435343.2	817	4	83	11	75	0	multi-exon	FALSE	canonical	2	14	junction_3	4.02768199119819	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATTGCTTTTTTGGGC	95157132	True	NA	2	True	AATAAA	-15	NA	95157759	95179925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_95157859_95158192_95158235_95158875_95159036_95179503
transcript_61270.nic	chr14	-	523	4	ISM	ENSG00000100697.15	ENST00000532939.3	5989	25	-132	38137	-35	-872	5prime_fragment	FALSE	canonical	3	39	junction_1	5.55777733351102	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCAATGAAAGAAACACTGG	-95157479	False	NA	NA	False	NA	NA	NA	95157564	95133482	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_95133504_95140658_95140760_95141682_95141749_95157229
transcript_61272.known	chr14	+	1709	3	FSM	ENSG00000235706.9	ENST00000554631.2	1709	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	15	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTTGGGCTGTCACGT	95157017	True	NA	10	True	AATAAA	-23	NA	95157644	95179933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_95159036_95179498_95179634_95179750
transcript_61274.known	chr14	+	650	2	FSM	ENSG00000235706.9	ENST00000661445.1	650	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTTTTTGGGCTGTCAC	95158191	False	NA	8	True	AATAAA	-21	NA	95158818	95179931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_95159036_95179498
transcript_61277.known	chr14	-	12749	13	FSM	ENSG00000165959.12	ENST00000298912.9	12749	13	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_6	5.49936865063214	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATTTCGTTGATGATACTT	-95319607	True	NA	-1	True	TATAAA	-14	NA	95319908	95181939	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_95191733_95193848_95193920_95194535_95194597_95196497_95196695_95202837_95204464_95209394_95209478_95210685_95210880_95213218_95213410_95215640_95215734_95221690_95221775_95223759_95223856_95230071_95230134_95319710
transcript_61282.known	chr14	+	1103	2	FSM	ENSG00000182512.5	ENST00000331334.5	1103	2	0	0	0	0	multi-exon	FALSE	canonical	3	1713	junction_1	0	428	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCGTCGAGCCCTGGTCT	95516659	True	NA	14	True	ATTAAA	-14	NA	95535049	95544714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_95535385_95543946
transcript_61284.known	chr14	-	428	2	FSM	ENSG00000247092.8	ENST00000553559.1	428	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTTGTTCCTACCTGT	-95534858	False	NA	-34	True	ATTAAA	-14	NA	95534872	95532913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_95533062_95534592
transcript_61285.known	chr14	-	981	2	FSM	ENSG00000247092.8	ENST00000554169.2	1375	2	394	0	-10	0	multi-exon	FALSE	canonical	3	99	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTACAAGGATCAGTAACAAA	-95534231	False	NA	NA	False	NA	NA	NA	95534245	95532633	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_95533062_95533692
transcript_61286.known	chr14	-	275	1	FSM	ENSG00000252481.1	ENST00000516672.1	275	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTTTTTTTTTAAACT	-95533615	False	NA	-2	True	NA	NA	NA	95533629	95533354	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_95533400_95533600
transcript_61287.known	chr14	+	1142	4	FSM	ENSG00000213231.13	ENST00000340722.8	1142	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	3.85861230093008	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTTGTGCTGAATTGGA	95685762	True	NA	18	True	ATTAAA	-18	NA	95686425	95692628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_95686630_95690735_95690907_95691267_95691337_95691930
transcript_61288.known	chr14	+	1724	3	FSM	ENSG00000213231.13	ENST00000464815.5	1724	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	4.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTTGTGCTGAATTGGA	95685774	True	NA	18	True	ATTAAA	-18	NA	95686437	95692628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_95686630_95690735_95690907_95691267
transcript_61289.known	chr14	-	1345	4	FSM	ENSG00000100721.11	ENST00000402399.6	1345	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	4.02768199119819	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAGGGACTACAATTTTT	-95713991	True	NA	NA	False	AATAAA	-34	NA	95714125	95709946	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_95710882_95711748_95711803_95712219_95712397_95713946
transcript_61290.known	chr14	-	1391	4	FSM	ENSG00000100721.11	ENST00000554012.5	1391	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	5.90668171555645	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTATTTTCCTTTGGA	-95714062	True	NA	89	True	AATAAA	-14	NA	95714196	95709966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_95710882_95711753_95711803_95712219_95712397_95713946
transcript_61291.nnic	chr14	+	3495	3	NNC	ENSG00000250366.4	novel	3373	3	NA	NA	-166	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	152	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGATGTCTTTTCTTTCAA	95876125	True	NA	20	True	AATAAA	-27	NA	95876225	95925571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_+_95876602_95876849_95877178_95922780
transcript_61292.known	chr14	+	3373	3	FSM	ENSG00000250366.4	ENST00000678517.1	3373	3	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	105.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAATGTGATGCTGTTAAA	95876391	False	NA	1	True	ATTAAA	-9	NA	95876429	95925663	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_95876602_95876859_95877178_95922780
transcript_61293.known	chr14	+	3197	2	FSM	ENSG00000250366.4	ENST00000503525.2	3197	2	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGATGTCTTTTCTTTCAA	95876692	False	NA	20	True	AATAAA	-27	NA	95876771	95925571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_95877178_95922780
transcript_61294.known	chr14	+	536	3	FSM	ENSG00000227051.7	ENST00000553782.1	536	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTGTTCTAGAACCAGGA	96038608	True	NA	NA	False	NA	NA	NA	96039383	96086809	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96039528_96040274_96040368_96086510
transcript_61296.nic	chr14	-	3523	20	ISM	ENSG00000066739.12	ENST00000359933.6	13162	42	-38	38040	-38	-87	5prime_fragment	TRUE	canonical	2	3	junction_13	3.92520091410191	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGACTCTCAGAACAAGAA	-96362818	True	NA	NA	False	NA	NA	NA	96363379	96317234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_96317318_96317697_96317856_96322111_96322255_96322539_96322736_96323895_96323999_96325648_96325923_96328346_96328536_96328673_96328767_96329483_96329635_96331375_96331638_96332304_96332411_96332500_96332656_96333687_96333874_96334404_96334502_96341521_96341702_96343118_96343282_96344653_96344757_96345232_96345386_96347178_96347342_96362814
transcript_61297.nic	chr14	-	2807	15	ISM	ENSG00000066739.12	ENST00000359933.6	13162	42	-38	46487	-38	-7959	5prime_fragment	FALSE	canonical	2	3	junction_8	4.04628829664816	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATTGGAACTTACCTTT	-96362818	True	NA	NA	False	NA	NA	NA	96363379	96325681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_96325923_96328346_96328536_96328673_96328767_96329483_96329635_96331375_96331638_96332304_96332411_96332500_96332656_96333687_96333874_96334404_96334502_96341521_96341702_96343118_96343282_96344653_96344757_96345232_96345386_96347178_96347342_96362814
transcript_61298.known	chr14	+	760	4	FSM	ENSG00000100744.15	ENST00000554182.5	760	4	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_1	53.8227543785051	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTCTTCATATAATATCT	96359839	True	NA	NA	False	NA	NA	NA	96363525	96385912	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96363569_96379687_96379756_96382246_96382506_96385522
transcript_61304.known	chr14	+	3283	18	FSM	ENSG00000140057.9	ENST00000267584.9	3283	18	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_13	5.81550248939438	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCGTGTCTGGCTTCTTTC	96391609	True	NA	12	True	AATAAA	-19	NA	96392127	96489427	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96392260_96398074_96398264_96404756_96404866_96408846_96408942_96420821_96420933_96437834_96437916_96442729_96442819_96446516_96446608_96449801_96449880_96451420_96451571_96456346_96456476_96458082_96458213_96471477_96471607_96472686_96472756_96478464_96478663_96482998_96483220_96486897_96487057_96488304
transcript_61311.known	chr14	+	601	3	FSM	ENSG00000140057.9	ENST00000556643.1	601	3	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_2	6	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAAAATGAAGGCCGGCA	96391625	True	NA	NA	False	AATAGA	-15	NA	96392143	96405052	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96392260_96398074_96398264_96404756
transcript_61314.known	chr14	+	4515	22	FSM	ENSG00000090060.19	ENST00000216277.13	4515	22	0	0	0	0	multi-exon	FALSE	canonical	3	1069	junction_12	501.608379103055	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTGCCTGATTTCTTTTG	96471607	True	NA	18	True	AATAAA	-21	NA	96502381	96567116	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96502601_96520054_96520229_96521005_96521073_96525309_96525392_96527429_96527540_96527952_96528007_96531474_96531587_96532330_96532421_96532510_96532650_96534490_96534564_96535878_96536000_96536975_96537061_96542242_96542297_96542773_96542894_96544148_96544259_96547796_96547919_96552479_96552623_96555846_96555948_96556174_96556414_96560648_96560712_96562818_96562894_96564954
transcript_61318.known	chr14	+	2588	21	FSM	ENSG00000090060.19	ENST00000392990.6	2588	21	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_19	601.90534139514	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTCATTAGAAAGTAGAA	96502306	True	NA	NA	False	AATACA	-45	NA	96502557	96565428	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96502601_96520054_96520229_96521005_96521073_96525309_96525392_96527429_96527540_96527952_96528007_96531474_96531587_96532330_96532421_96532510_96532650_96534490_96534564_96535878_96536000_96536975_96537061_96542242_96542297_96542773_96542894_96544148_96544259_96547796_96547919_96552479_96552623_96555846_96555948_96556174_96556414_96562818_96562894_96564954
transcript_61324.known	chr14	+	2267	20	FSM	ENSG00000090060.19	ENST00000553689.5	2267	20	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_4	536.761345834693	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAACCTCAGGGGTCC	96471623	True	NA	8	True	AATAAA	-18	NA	96502397	96565048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96502601_96520054_96520229_96521005_96521073_96525309_96525392_96531474_96531587_96532330_96532421_96532510_96532650_96534490_96534564_96535878_96536000_96536975_96537061_96542242_96542297_96542773_96542894_96544148_96544259_96547796_96547919_96552479_96552623_96555846_96555948_96556174_96556414_96560648_96560712_96562818_96562894_96564954
transcript_6133.known	chr1	+	1778	9	FSM	ENSG00000121775.18	ENST00000336294.10	1778	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	42.1453956559907	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGCCTGTGTCCTGTGGTT	32069447	True	NA	80	True	AAAAAG	-21	NA	32072938	32102863	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32073052_32074950_32075078_32075602_32075823_32076762_32076847_32077163_32077319_32091674_32092012_32094783_32094972_32100441_32100563_32102430
transcript_61334.nic	chr14	+	1753	16	ISM	ENSG00000090060.19	ENST00000392990.6	2588	21	-211	17524	-29	0	5prime_fragment	TRUE	canonical	3	1069	junction_12	514.661554378754	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAGAAAAAGGTAAAT	96502332	False	NA	NA	False	AAAAAG	-39	NA	96502346	96547904	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_96502601_96520054_96520229_96521005_96521073_96525309_96525392_96527429_96527540_96527952_96528007_96531474_96531587_96532330_96532421_96532510_96532650_96534490_96534564_96535878_96536000_96536975_96537061_96542242_96542297_96542773_96542894_96544148_96544259_96547796
transcript_61341.known	chr14	+	2173	12	FSM	ENSG00000090060.19	ENST00000618976.2	2173	12	0	0	0	0	multi-exon	FALSE	canonical	3	1208	junction_9	433.255617103883	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGATGTCTCTGTGTTTT	96471601	True	NA	0	True	ATTAAA	-18	NA	96502375	96537901	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96502601_96520054_96520229_96521005_96521073_96525309_96525392_96527429_96527540_96527952_96528007_96531474_96531587_96532330_96532421_96532510_96532650_96534490_96534564_96535878_96536000_96536975
transcript_61345.known	chr14	+	3264	9	FSM	ENSG00000090060.19	ENST00000557320.5	3264	9	0	0	0	0	multi-exon	FALSE	canonical	3	2066	junction_1	96.8836286479816	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCCTGTATTTTTTA	96471626	True	NA	NA	False	AATAAA	-9	NA	96502400	96534885	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96502601_96520054_96520229_96521005_96521073_96525309_96525392_96527429_96527540_96527952_96528007_96531474_96531587_96532330_96532421_96532510
transcript_61349.known	chr14	+	1421	7	FSM	ENSG00000090060.19	ENST00000557471.5	1421	7	0	0	0	0	multi-exon	FALSE	canonical	3	2066	junction_1	101.167764958344	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTAATGTTGTTTTTTT	96471666	True	NA	NA	False	ATTAAA	-8	NA	96502440	96532248	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96502601_96520054_96520229_96521005_96521073_96525309_96525392_96527429_96527540_96527952_96528007_96531474
transcript_61354.known	chr14	-	1512	1	FSM	ENSG00000260806.1	ENST00000569214.1	1512	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGGGCATGGTAGTTC	-96502089	True	NA	NA	False	AAAAAG	-39	NA	96502321	96500809	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_96500800_96502300
transcript_61355.known	chr14	+	1072	4	FSM	ENSG00000258702.4	ENST00000663585.1	1072	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCCAGTGCAGCGGTGT	96592710	True	NA	NA	False	NA	NA	NA	96592761	96595763	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96592816_96593120_96593250_96593489_96593700_96595084
transcript_61357.known	chr14	+	1816	14	FSM	ENSG00000100749.9	ENST00000553683.2	1816	14	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_12	384.655121024246	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGTGGCTGTAAGGTT	96789070	True	NA	15	True	AATAAA	-30	NA	96797303	96881612	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556_96860736_96876029_96876121_96877501_96877574_96881176
transcript_61360.known	chr14	+	1682	13	FSM	ENSG00000100749.9	ENST00000680683.1	1682	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_12	308.836796166951	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACAGTATGTTGTGGCTG	96789146	True	NA	8	True	AATAAA	-23	NA	96797379	96881605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556_96860736_96876029_96876121_96881155
transcript_61362.known	chr14	+	1444	13	FSM	ENSG00000100749.9	ENST00000679903.1	1444	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	303.93213560852	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTTCAGGTTATACTCC	96789154	True	NA	32	True	ATTAAA	-21	NA	96797387	96881405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556_96860736_96876038_96876121_96881176
transcript_61364.known	chr14	+	1435	13	FSM	ENSG00000100749.9	ENST00000680538.1	1435	13	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_10	308.787098535904	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATCTTCAGGTTATACT	96789080	True	NA	30	True	ATTAAA	-19	NA	96797313	96881403	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860646_96860736_96876029_96876121_96881176
transcript_61366.known	chr14	+	1823	12	FSM	ENSG00000100749.9	ENST00000681419.1	1823	12	0	0	0	0	multi-exon	FALSE	canonical	3	949	junction_5	83.9485281103893	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGGAAAGGAATTAAAGCT	96789158	True	NA	NA	False	TATAAA	-35	NA	96797391	96876723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556_96860736_96876029
transcript_61367.known	chr14	+	6456	12	FSM	ENSG00000100749.9	ENST00000681524.1	6456	12	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_8	317.940947789038	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGTTTGTGATGCCTGC	96789113	True	NA	NA	False	AATAAA	-24	NA	96797346	96886488	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856527_96856587_96860556_96860736_96876029_96876121_96881176
transcript_61369.known	chr14	+	1320	11	FSM	ENSG00000100749.9	ENST00000557352.2	1320	11	0	0	0	0	multi-exon	FALSE	canonical	3	949	junction_5	79.0187319564165	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTAGTAGCAAGTTACTA	96789154	True	NA	NA	False	AATAAA	-18	NA	96797387	96860922	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556
transcript_61371.known	chr14	+	1202	10	FSM	ENSG00000100749.9	ENST00000679736.1	1202	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_8	343.595297399516	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTAGTAGCAAGTTACTA	96789151	True	NA	NA	False	AATAAA	-18	NA	96797384	96860922	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856527_96856587_96860556
transcript_61373.nic	chr14	+	476	5	ISM	ENSG00000100749.9	ENST00000555351.2	968	6	11	5967	-3	-5967	5prime_fragment	FALSE	canonical	3	1102	junction_1	36.6401419211225	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAAAAAGGTAAAAATATG	96789108	True	NA	NA	False	NA	NA	NA	96797341	96847335	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256
transcript_61374.known	chr14	+	1130	11	FSM	ENSG00000100749.9	ENST00000680509.1	1130	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	330.109678743293	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAATTTTGTTATTAAATT	96789143	True	NA	NA	False	AAAACA	-10	NA	96797376	96860735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96797434_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556
transcript_61375.known	chr14	+	1070	11	FSM	ENSG00000100749.9	ENST00000680348.1	1070	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	421.595256140294	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGACCTCAGTGTTGTGGA	96789161	True	NA	NA	False	ACTAAA	-29	NA	96797394	96860681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852836_96852944_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556
transcript_61376.known	chr14	+	1960	13	FSM	ENSG00000100749.9	ENST00000681344.1	1960	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	308.511029876657	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGTATGTTGTGGCTGT	96789215	True	NA	9	True	AATAAA	-24	NA	96797448	96881606	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_96797815_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556_96860736_96876029_96876121_96881176
transcript_61378.known	chr14	-	2856	13	FSM	ENSG00000183576.13	ENST00000331768.10	2856	13	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_8	29.2759856082307	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTGTCTATTCCTTTT	-99475858	True	NA	-6	True	ATTAAA	-17	NA	99480859	99397747	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_99399126_99400098_99400260_99404224_99404311_99405204_99405372_99406515_99406591_99412950_99413066_99413875_99413935_99458278_99458536_99459112_99459186_99461191_99461341_99463485_99463579_99465702_99465814_99480727
transcript_61382.known	chr14	-	1330	9	FSM	ENSG00000183576.13	ENST00000329331.7	1330	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	109.399425844014	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGATCTTTTTTCTTTGT	-99475787	True	NA	1	True	AATAAA	-18	NA	99480788	99409803	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_99410216_99412950_99413066_99413875_99413935_99458278_99458536_99459112_99459186_99461191_99461341_99463485_99463579_99465702_99465814_99480727
transcript_61383.known	chr14	-	16564	6	FSM	ENSG00000205476.9	ENST00000380243.9	16564	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	11.8321595661992	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTACTGAATAAATGATCAT	-99603294	True	NA	NA	False	AATAAA	-15	NA	99604207	99500189	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_99515336_99516187_99516287_99517087_99517184_99522132_99522241_99536014_99536089_99603166
transcript_61387.known	chr14	+	747	5	FSM	ENSG00000090061.17	ENST00000556641.5	747	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	2.8613807855649	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGCTAATGCTGTTTC	99474770	True	NA	NA	False	NA	NA	NA	99481449	99501019	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_99481480_99492625_99492875_99493513_99493596_99495497_99495630_99500765
transcript_61388.known	chr14	+	936	7	FSM	ENSG00000090061.17	ENST00000557441.5	936	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	9.10433352249844	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCATGTATAGGAGATG	99474732	True	NA	NA	False	AATACA	-14	NA	99481411	99502312	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_99481615_99492625_99492875_99493513_99493596_99495497_99495630_99500765_99500872_99501355_99501414_99502206
transcript_61389.nic	chr14	+	452	4	ISM	ENSG00000090061.17	ENST00000556641.5	747	5	-41	5472	0	0	5prime_fragment	FALSE	canonical	3	22	junction_1	3.29983164553722	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATGTAAAGATATCA	99474729	True	NA	NA	False	AAGAAA	-5	NA	99481408	99495547	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_99481480_99492625_99492875_99493513_99493596_99495497
transcript_61393.known	chr14	+	4460	22	FSM	ENSG00000066629.18	ENST00000262233.11	4460	22	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_11	8.93310995760934	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTTCATTTCATTTTAAT	99792073	True	NA	NA	False	AATGAA	-25	NA	99793412	99942060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_99793544_99850852_99851036_99865513_99865647_99878484_99878620_99891198_99891228_99894628_99894759_99897144_99897295_99898232_99898303_99900928_99901040_99907637_99907734_99909344_99909480_99910241_99910342_99911421_99911577_99914178_99914305_99914565_99914698_99917781_99917850_99920788_99920878_99936028_99936127_99936246_99936335_99937816_99937913_99939196_99939328_99939986
transcript_61401.known	chr14	-	3834	3	FSM	ENSG00000168350.8	ENST00000305631.7	3834	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGACCTGGTGTTCCGTGT	-100159589	True	NA	NA	False	TATAAA	-16	NA	100159645	100143956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_100146908_100148967_100149711_100159505
transcript_61402.nnic	chr14	+	1660	6	NNC	ENSG00000100811.14	novel	931	6	NA	NA	-350	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	77.1300200959393	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTATCTTGCTCTGTAA	100238727	False	NA	NA	False	ATTAAA	-35	NA	100238793	100277793	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_+_100238970_100239198_100239924_100262303_100262467_100274697_100274759_100276489_100276649_100277417
transcript_61411.known	chr14	-	1025	5	FSM	ENSG00000197119.13	ENST00000556715.6	1025	5	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_3	159.679953344182	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCCCCGCGCTACCGCGGC	-100300319	True	NA	NA	False	NA	NA	NA	100306515	100292524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_100293033_100293293_100293378_100295625_100295698_100298841_100298886_100306198
transcript_61413.known	chr14	-	1067	5	FSM	ENSG00000197119.13	ENST00000556868.1	1067	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	177.939596492742	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGCAGATCTACGGGCACGA	-100300321	True	NA	NA	False	NA	NA	NA	100306517	100292780	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_100293033_100293293_100293378_100295625_100295994_100298841_100298886_100306198
transcript_61417.known	chr14	-	2291	4	FSM	ENSG00000197119.13	ENST00000359232.8	2291	4	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_2	82.4068497692327	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGAGGCTGCCTTTGCA	-100300248	True	NA	-6	True	AATAAA	-19	NA	100306444	100291115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_100293033_100293293_100293378_100298841_100298886_100306198
transcript_61419.known	chr14	-	674	3	FSM	ENSG00000197119.13	ENST00000554060.1	674	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	223.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCCACGTTGCTGCGT	-100300294	True	NA	NA	False	NA	NA	NA	100306490	100292734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_100293033_100293293_100293378_100306198
transcript_61421.known	chr14	-	331	2	FSM	ENSG00000258982.1	ENST00000554537.1	331	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGTAACACTCACTGCA	-100238286	True	NA	NA	False	NA	NA	NA	100238555	100207406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_100207653_100238470
transcript_61422.known	chr14	-	534	2	FSM	ENSG00000197119.13	ENST00000557438.1	534	2	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCACCCAGAGCAAGGGC	-100300248	True	NA	NA	False	NA	NA	NA	100306444	100298597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_100298886_100306198
transcript_61424.known	chr14	-	1050	2	FSM	ENSG00000197119.13	ENST00000556844.1	1050	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTATCAGCTCCAGCGGGT	-100300228	True	NA	NA	False	NA	NA	NA	100306424	100304952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_100305777_100306198
transcript_61426.known	chr14	+	6534	5	FSM	ENSG00000100811.14	ENST00000262238.10	6534	5	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_1	19.1702895126808	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATGCCTGTGGTTCTTGT	100236209	True	NA	19	True	AATAAA	-19	NA	100239143	100282788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_100239924_100262303_100262467_100274697_100274759_100276489_100276649_100277417
transcript_61427.known	chr14	+	1923	7	FSM	ENSG00000176473.14	ENST00000402312.8	1923	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	32.5802428201851	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTGCATTAGCAGCTT	100374972	True	NA	36	True	AATAAA	-36	NA	100376484	100530303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_100376496_100380909_100381747_100468020_100468169_100483993_100484125_100525869_100526041_100529067_100529209_100529819
transcript_61428.known	chr14	+	1952	7	FSM	ENSG00000176473.14	ENST00000554998.5	1952	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	26.9840487860678	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTTGCTGTTTGTTAAG	100374920	True	NA	4	True	AATAAA	-4	NA	100376432	100530271	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_100376505_100380909_100381747_100468020_100468169_100483993_100484125_100525869_100526041_100529067_100529209_100529819
transcript_6143.known	chr1	+	1215	8	FSM	ENSG00000121774.18	ENST00000492989.1	1215	8	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	667.953316222819	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAACATGAGGGGAAAA	32001206	False	NA	7	True	NA	NA	NA	32013995	32042624	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32014378_32030297_32030423_32033187_32033335_32036909_32037044_32037834_32038037_32038551_32038620_32039514_32039574_32042526
transcript_61430.known	chr14	+	2123	7	FSM	ENSG00000176473.14	ENST00000335290.10	2123	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	37.9282949202249	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTGCATTAGCAGCTT	100374981	True	NA	36	True	AATAAA	-36	NA	100376493	100530303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_100376705_100380909_100381747_100468020_100468169_100483993_100484125_100525869_100526041_100529067_100529209_100529819
transcript_61431.known	chr14	+	705	6	FSM	ENSG00000176473.14	ENST00000555775.5	705	6	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	42.9138672226123	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGGTGACTTGCTGGTGAC	100376404	False	NA	NA	False	NA	NA	NA	100376417	100529855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_100376496_100468020_100468169_100483993_100484125_100525869_100526041_100529067_100529209_100529819
transcript_61454.known	chr14	-	3092	11	FSM	ENSG00000140105.18	ENST00000355338.6	3092	11	0	0	0	0	multi-exon	FALSE	canonical	3	515	junction_10	132.76957482797	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAGTAAATAAACTTCCTT	NA	False	NA	-36	True	NA	NA	NA	100376805	100333817	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_100335037_100337061_100337203_100342397_100342572_100343274_100343388_100346745_100346847_100353686_100353870_100354446_100354567_100360553_100360663_100361707_100361922_100369086_100369259_100376259
transcript_61473.known	chr14	-	2466	10	FSM	ENSG00000140105.18	ENST00000358655.8	2466	10	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_9	208.457829468376	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGGCTCCTGCTCTTGTC	-100362620	True	NA	-20	True	AATAAA	-4	NA	100376335	100333801	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_100335037_100337061_100337203_100342397_100342572_100343274_100343388_100346745_100346847_100353686_100353870_100354446_100354567_100360553_100360663_100361707_100361922_100376259
transcript_61485.known	chr14	-	2639	11	FSM	ENSG00000140105.18	ENST00000392882.7	2639	11	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_10	206.528061047403	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGTCATTGTGCTCTGT	-100361632	False	NA	-8	True	AATAAA	-16	NA	100375347	100333789	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_100335037_100337061_100337203_100342397_100342572_100343274_100343388_100346745_100346847_100353686_100353870_100354446_100354567_100360553_100360663_100361707_100361922_100369086_100369259_100375282
transcript_61486.known	chr14	-	2690	10	FSM	ENSG00000140105.18	ENST00000344102.9	2690	10	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_9	261.118581453421	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCACCCAGTAGAGTAAAT	-100361893	False	NA	-46	True	NA	NA	NA	100375608	100333827	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_100335037_100337061_100337203_100342397_100342572_100343274_100343388_100346745_100346847_100353686_100353870_100354446_100354567_100360553_100360663_100361707_100361922_100375282
transcript_61487.known	chr14	-	471	4	FSM	ENSG00000140105.18	ENST00000557239.5	471	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	274.840964114805	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCCATTTTATCTGTACA	-100362593	True	NA	NA	False	NA	NA	NA	100376308	100354530	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_100354567_100361707_100361922_100369086_100369259_100376259
transcript_61488.known	chr14	-	2666	7	FSM	ENSG00000183092.18	ENST00000553553.6	2666	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	3.02305952453618	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGTTGGGCTGTTTCTC	NA	False	NA	2	True	AATAAA	-19	NA	100568491	100537146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_100539316_100540495_100540580_100543857_100543966_100544999_100545067_100546500_100546663_100567910_100567940_100568444
transcript_61489.known	chr14	-	2751	7	FSM	ENSG00000183092.18	ENST00000556188.6	2751	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGTTGGGCTGTTTCTC	NA	False	NA	2	True	AATAAA	-19	NA	100569558	100537146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_100539316_100540495_100540580_100543857_100543966_100544999_100545067_100546500_100546663_100567910_100567940_100569426
transcript_61490.known	chr14	-	2784	7	FSM	ENSG00000183092.18	ENST00000554140.3	2788	7	4	0	4	0	multi-exon	FALSE	canonical	1	3	junction_4	2	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGTTGGGCTGTTTCTC	NA	False	NA	2	True	AATAAA	-19	NA	100587413	100537146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_100539316_100540495_100540580_100543857_100543966_100544999_100545067_100546500_100546663_100567910_100567940_100587248
transcript_61492.known	chr14	-	2744	6	FSM	ENSG00000183092.18	ENST00000557378.6	2750	6	0	6	0	0	multi-exon	FALSE	canonical	1	3	junction_4	2.13541565040626	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAATCTGGGTTGGGCTG	-100568059	False	NA	-4	True	AATAAA	-13	NA	100568070	100537152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_100539316_100540495_100540580_100543857_100543966_100544999_100545067_100546500_100546663_100567910
transcript_61493.known	chr14	+	4657	5	FSM	ENSG00000185559.16	ENST00000341267.9	4657	5	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_4	6.74536878161602	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTCTGCGTCTTTGAT	100726734	True	NA	NA	False	AATAAA	-15	NA	100726891	100738224	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_100727136_100728395_100728460_100728935_100729067_100732041_100732184_100734148
transcript_61503.known	chr14	+	1949	10	FSM	ENSG00000214548.18	ENST00000649261.1	1949	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	601.852715668896	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATAAATGTGTTTCCTGTC	100825995	True	NA	NA	False	NA	NA	NA	100826117	100860996	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_100826218_100828707_100828817_100829033_100829750_100831420_100831535_100832511_100832642_100834631_100834752_100835735_100835880_100836166_100836301_100845457_100845534_100860690
transcript_61518.known	chr14	+	1835	9	FSM	ENSG00000214548.18	ENST00000423456.6	1835	9	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_6	607.101502530672	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGGATGTGCTACTAAT	100825995	True	NA	NA	False	AATAAA	-24	NA	100826117	100861026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_100826218_100828707_100828817_100829033_100829750_100831420_100831535_100832511_100832642_100834631_100834752_100836166_100836301_100845457_100845534_100860690
transcript_61528.known	chr14	+	1046	8	FSM	ENSG00000214548.18	ENST00000649036.1	1046	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	593.659800882352	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCTTAACAAAAACTGATG	100825993	True	NA	NA	False	AATAAA	-10	NA	100826115	100861012	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_100826218_100828707_100828817_100829033_100829182_100829708_100829750_100831420_100831535_100836166_100836301_100845457_100845534_100860690
transcript_6153.known	chr1	+	1538	7	FSM	ENSG00000121775.18	ENST00000441402.5	1538	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	29.3806436658937	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTCCTGTGGTTCTT	32069451	True	NA	83	True	AAAAAG	-24	NA	32072942	32102866	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32073052_32074950_32075078_32075602_32075823_32091674_32092012_32094783_32094972_32100441_32100563_32102430
transcript_61534.known	chr14	+	1694	8	FSM	ENSG00000214548.18	ENST00000412736.7	1694	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	606.162973976808	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGGATGTGCTACTAAT	100825995	True	NA	NA	False	AATAAA	-24	NA	100826117	100861026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_100826218_100828707_100828817_100829033_100829750_100831015_100831095_100835735_100835880_100836166_100836301_100845457_100845534_100860690
transcript_61538.known	chr14	+	1674	8	FSM	ENSG00000214548.18	ENST00000398518.6	1674	8	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_4	586.690893129962	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAATAAATGTGTTTCCTG	100826004	True	NA	NA	False	NA	NA	NA	100826126	100860994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_100826218_100828707_100828817_100829033_100829750_100831420_100831535_100832511_100832642_100836166_100836301_100845457_100845534_100860690
transcript_61540.known	chr14	+	1712	8	FSM	ENSG00000214548.18	ENST00000554639.5	1712	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	590.65936866854	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGGATGTGCTACTAAT	100826009	True	NA	NA	False	AATAAA	-24	NA	100826131	100861026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_100826218_100828707_100828817_100829033_100829750_100831420_100831535_100835738_100835880_100836166_100836301_100845457_100845534_100860690
transcript_61565.nic	chr14	+	1554	7	NIC	ENSG00000214548.18	novel	1694	8	NA	NA	-2	0	intron_retention	FALSE	canonical	3	68	junction_4	581.151634448551	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGGATGTGCTACTAAT	100825991	True	NA	NA	False	AATAAA	-24	NA	100826113	100861026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_100826218_100828707_100828817_100829033_100829750_100831015_100831095_100836166_100836301_100845457_100845534_100860690
transcript_61567.known	chr14	+	12998	7	FSM	ENSG00000214548.18	ENST00000522771.9	12998	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	553.650511504224	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGGCTTTTTCCTTCCT	100825995	True	NA	NA	False	AGTAAA	-19	NA	100826117	100857624	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_100826218_100828707_100828817_100829033_100829750_100831420_100831535_100836166_100836301_100845457_100845534_100845875
transcript_61569.known	chr14	+	1582	7	FSM	ENSG00000214548.18	ENST00000451743.6	1582	7	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_4	544.384591381253	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGTGCTACTAATATAAG	100826003	True	NA	NA	False	AATAAA	-29	NA	100826125	100861031	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_100826218_100828707_100828817_100829033_100829750_100831420_100831535_100836166_100836301_100845457_100845534_100860690
transcript_61572.known	chr14	+	1608	7	FSM	ENSG00000214548.18	ENST00000429159.6	1608	7	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_4	550.145056629007	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGATGGATGTGCTACT	100825985	True	NA	NA	False	AATAAA	-21	NA	100826107	100861023	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_100826218_100828707_100828817_100829033_100829750_100832511_100832642_100836166_100836301_100845457_100845534_100860690
transcript_61579.known	chr14	+	1643	7	FSM	ENSG00000214548.18	ENST00000648456.1	1643	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	580.378731710787	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGGATGTGCTACTAAT	NA	False	NA	NA	False	AATAAA	-24	NA	100826097	100861026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_100826218_100828707_100828817_100829033_100829788_100831420_100831535_100836166_100836301_100845457_100845534_100860690
transcript_61599.known	chr14	+	1426	6	FSM	ENSG00000214548.18	ENST00000521404.5	1426	6	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_3	478.10668265566	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTCTCAATAAATGTGTT	100826003	True	NA	NA	False	NA	NA	NA	100826125	100860989	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_100826218_100828707_100828817_100829033_100829750_100836166_100836301_100845457_100845534_100860690
transcript_61612.known	chr14	+	4504	3	FSM	ENSG00000214548.18	ENST00000452120.7	4504	3	0	0	0	0	multi-exon	FALSE	canonical	3	1002	junction_1	69	872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCACTGCAACCTCTGCC	100825995	True	NA	NA	False	NA	NA	NA	100826117	100833328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_100826218_100828707_100828817_100829033
transcript_61615.known	chr14	+	499	3	FSM	ENSG00000214548.18	ENST00000455286.1	499	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	570	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTGTCAGTCTTTGTCGA	100827302	True	NA	NA	False	NA	NA	NA	100827410	100829306	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_100827528_100828707_100828817_100829033
transcript_61616.known	chr14	+	2853	4	FSM	ENSG00000214548.18	ENST00000524035.5	2853	4	0	0	0	0	multi-exon	FALSE	canonical	3	714	junction_1	353.061845385007	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTGATGGATGTGCTA	100833636	False	NA	NA	False	AATAAA	-19	NA	100833763	100861021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_100836076_100836166_100836301_100845457_100845534_100860690
transcript_61632.known	chr14	-	588	4	FSM	ENSG00000230805.8	ENST00000448840.6	588	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.24721912892465	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGTTGGCTGCACCAAAG	-101077626	True	NA	NA	False	NA	NA	NA	101077671	101073895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_101074130_101074480_101074562_101076533_101076707_101077571
transcript_61634.known	chr14	+	4328	14	FSM	ENSG00000078304.19	ENST00000334743.9	4328	14	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_13	128.186393502938	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCTCATCATGAAACTAAA	101807785	True	NA	3	True	AATAAA	-17	NA	101809894	101927977	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_101810037_101856685_101856886_101882160_101882272_101883256_101883350_101883431_101883563_101890236_101890297_101892999_101893109_101894506_101894561_101901718_101901890_101906401_101906530_101909588_101909691_101912400_101912474_101917830_101917948_101925140
transcript_61638.known	chr14	+	3845	13	FSM	ENSG00000078304.19	ENST00000350249.7	3845	13	0	0	0	0	multi-exon	TRUE	canonical	3	78	junction_12	100.836880102911	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTCTGCGTTTGGCATC	101807693	True	NA	7	True	AATAAA	-22	NA	101809802	101927519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_101810037_101856685_101856886_101882160_101882272_101883256_101883350_101883431_101883563_101890236_101890297_101892999_101893109_101894506_101894561_101901718_101901890_101906401_101906530_101909588_101909691_101912400_101912474_101925140
transcript_61641.known	chr14	+	1526	12	FSM	ENSG00000078304.19	ENST00000445439.7	1526	12	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_1	43.9573422067838	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCCTTTTGTACAAGTAC	101807785	True	NA	13	True	AATAAA	-22	NA	101809894	101912625	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_101810037_101856685_101856886_101882160_101882272_101883256_101883350_101883431_101883563_101890236_101890297_101892999_101893109_101894506_101894561_101901718_101901890_101906401_101906530_101909588_101909691_101912400
transcript_61648.known	chr14	+	735	2	FSM	ENSG00000078304.19	ENST00000556946.1	735	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGGCTTTAAATCCTAAG	101807725	True	NA	NA	False	ATTAAA	-19	NA	101809834	101836701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_101810037_101836168
transcript_61649.known	chr14	+	1079	1	FSM	ENSG00000271780.1	ENST00000607414.1	1079	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTGTTGAATAAGTGAT	101948116	True	NA	89	True	ATTAAA	-36	NA	101948346	101949425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_101948300_101949400
transcript_61651.nic	chr14	+	2776	9	ISM	ENSG00000197102.14	ENST00000681668.1	5261	25	-88	17200	-88	-2122	5prime_fragment	FALSE	canonical	3	81	junction_4	15.8587515271537	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACCTAGAAGTCCGTTCC	NA	False	NA	NA	False	AAGAAA	-4	NA	101964484	101987483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_101964948_101975711_101975800_101979318_101979493_101979718_101979975_101980363_101980551_101983018_101983291_101983381_101983610_101985686_101986764_101987452
transcript_61653.nic	chr14	+	2744	8	ISM	ENSG00000197102.14	ENST00000681668.1	5261	25	-88	17921	-88	-2843	5prime_fragment	FALSE	canonical	3	81	junction_4	15.1158789330415	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGCTCTCATGTAATCC	NA	False	NA	NA	False	AAGAAA	-2	NA	101964484	101986762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_101964948_101975711_101975800_101979318_101979493_101979718_101979975_101980363_101980551_101983018_101983291_101983381_101983610_101985686
transcript_61654.nic	chr14	+	1531	7	ISM	ENSG00000197102.14	ENST00000681668.1	5261	25	-88	21211	-88	-6133	5prime_fragment	FALSE	canonical	3	81	junction_4	15.7550697307953	268	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAGAAAATCTGAAGATG	NA	False	NA	NA	False	AAGAAA	-3	NA	101964484	101983472	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_101964948_101975711_101975800_101979318_101979493_101979718_101979975_101980363_101980551_101983018_101983291_101983381
transcript_61657.nic	chr14	+	1440	6	ISM	ENSG00000197102.14	ENST00000681668.1	5261	25	-88	21393	-88	-6315	5prime_fragment	FALSE	canonical	3	81	junction_4	15.4583310871517	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTTTGAATATATAAGA	NA	False	NA	15	True	NA	NA	NA	101964484	101983290	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_101964948_101975711_101975800_101979318_101979493_101979718_101979975_101980363_101980551_101983018
transcript_61661.known	chr14	-	3228	11	FSM	ENSG00000080824.19	ENST00000216281.13	3228	11	0	0	0	0	multi-exon	FALSE	canonical	3	2947	junction_10	505.282732734852	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACAGTGTCTCAAAGTTC	-101959874	True	NA	-5	True	AATACA	-19	NA	102087044	102080741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_102081822_102082110_102082445_102083033_102083303_102083545_102083694_102083792_102083984_102084398_102084565_102084680_102084999_102085297_102085432_102085757_102086125_102086216_102086379_102086985
transcript_61675.known	chr14	-	3510	12	FSM	ENSG00000080824.19	ENST00000334701.11	3510	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_11	1445.54983676749	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTGTGTGACAGTGTCTT	-102139181	True	NA	-8	True	AATACA	-14	NA	102139686	102081048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_102081822_102082110_102082445_102083033_102083303_102083545_102083694_102083792_102083984_102084398_102084565_102084680_102084999_102085297_102085432_102085757_102086125_102086216_102086379_102101874_102102086_102139249
transcript_61680.known	chr14	+	2695	5	FSM	ENSG00000140153.18	ENST00000424963.6	2695	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	46.0054344615938	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATACCGCTTGTTTATCT	102136941	True	NA	2	True	ATTAAA	-10	NA	102139851	102223667	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_102140173_102194937_102195121_102197754_102197848_102208602_102209863_102222829
transcript_61684.nic	chr14	-	1409	5	ISM	ENSG00000080824.19	ENST00000216281.13	3228	11	-544	4114	-544	77	5prime_fragment	FALSE	canonical	3	2947	junction_4	240.547682383348	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGATGGTGACAAGAAGA	-102087490	True	NA	-56	True	AAGAAA	-2	NA	102087588	102084855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_102084999_102085297_102085432_102085757_102086125_102086216_102086379_102086985
transcript_61688.nic	chr14	-	1332	5	ISM	ENSG00000080824.19	ENST00000216281.13	3228	11	-544	4191	-544	0	5prime_fragment	FALSE	canonical	3	2947	junction_4	240.547682383348	1228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAGAAAAAGAAGAGAA	-102087490	True	NA	-133	True	AAGAAA	-18	NA	102087588	102084932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_102084999_102085297_102085432_102085757_102086125_102086216_102086379_102086985
transcript_61693.known	chr14	+	2067	4	FSM	ENSG00000140153.18	ENST00000454394.2	2067	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	52.8540968663315	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTAGCGCTCCTGTATTAG	102137003	True	NA	-97	True	NA	NA	NA	102139913	102210134	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_102140173_102194937_102195121_102197754_102197848_102208602
transcript_61694.known	chr14	+	2616	4	FSM	ENSG00000140153.18	ENST00000335263.9	2616	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	26.5497436689865	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTTGTTTATCTTCTGTT	102136933	True	NA	8	True	ATTAAA	-16	NA	102139843	102223673	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_102140173_102194937_102195121_102208602_102209863_102222829
transcript_61702.known	chr14	+	491	3	FSM	ENSG00000140153.18	ENST00000557485.5	491	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	50.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAACATGTACTTATATAA	102139329	False	NA	NA	False	NA	NA	NA	102139502	102208683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_102139730_102194937_102195121_102208602
transcript_61705.known	chr14	+	2384	3	FSM	ENSG00000140153.18	ENST00000342702.8	2384	3	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_2	11	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTTGTAGCACTTTGAT	102136986	True	NA	18	True	AATAAA	-18	NA	102139896	102210527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_102140173_102194937_102195121_102208602
transcript_61709.known	chr14	+	2198	3	FSM	ENSG00000140153.18	ENST00000299135.6	2198	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTTTGTAGCACTTTG	102137000	True	NA	16	True	AATAAA	-16	NA	102139910	102210525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_102140173_102193462_102193476_102208602
transcript_61710.known	chr14	+	2382	3	FSM	ENSG00000140153.18	ENST00000556807.1	2382	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	20	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCGCTTGTTTATCTTCTG	102136982	True	NA	6	True	ATTAAA	-14	NA	102139892	102223671	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_102140173_102208602_102209863_102222829
transcript_61718.known	chr14	+	2865	9	FSM	ENSG00000022976.16	ENST00000559098.5	2865	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	24.2332416321053	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTGTCTACATTTTTCT	102319940	False	NA	7	True	TATAAA	-18	NA	102319957	102342367	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_102320054_102325984_102326888_102331621_102331847_102334553_102334647_102335688_102335839_102336634_102336720_102338815_102338954_102339093_102339224_102341322
transcript_61719.known	chr14	+	2992	8	FSM	ENSG00000022976.16	ENST00000442396.7	2992	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	11.7212522838663	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTGTCTACATTTTTCT	102318978	True	NA	7	True	TATAAA	-18	NA	102319745	102342367	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_102320054_102325984_102326888_102331621_102331847_102334553_102334647_102335688_102335839_102338815_102338954_102339093_102339224_102341322
transcript_61720.nic	chr14	+	2226	8	NIC	ENSG00000022976.16	novel	2992	8	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_7	15.5550372443614	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTGTCTACATTTTTCT	102318964	True	NA	7	True	TATAAA	-18	NA	102319731	102342367	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_102320054_102325984_102326888_102331621_102331847_102334553_102334647_102335688_102335839_102338815_102338954_102339093_102339224_102342102
transcript_61726.known	chr14	-	4270	6	FSM	ENSG00000100865.15	ENST00000559514.5	4270	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	175.10065676633	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGACAGTGTGCTTTTTTTT	-102359138	False	NA	NA	False	ATTAAA	-20	NA	102362916	102341101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_102344390_102348278_102348760_102349918_102350049_102355767_102355898_102359418_102359588_102362844
transcript_6173.known	chr1	+	3941	14	FSM	ENSG00000025800.14	ENST00000471599.5	3941	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	72.7619934602378	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	32099204	True	NA	18	True	ATTAAA	-21	NA	32108057	32173173	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32108135_32154587_32154722_32156852_32156928_32157345_32157446_32158266_32158362_32159399_32159532_32160618_32160704_32161946_32162047_32162360_32162525_32163234_32163314_32166104_32166231_32167168_32167297_32169881_32170061_32170706
transcript_61732.known	chr14	-	953	5	FSM	ENSG00000100865.15	ENST00000216756.11	953	5	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_2	23.8170107276291	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGAGTGATCTAGTTTC	-102359112	True	NA	-2	True	AGTAAA	-23	NA	102362890	102348281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_102348760_102349918_102350049_102355767_102355898_102359418_102359588_102362844
transcript_61734.known	chr14	+	8704	20	FSM	ENSG00000196663.16	ENST00000359520.12	8704	20	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_4	7.6455407675853	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTTGTCTCTAACTACT	102361922	True	NA	13	True	AATAAA	-21	NA	102362940	102502477	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_102363117_102376649_102376941_102407337_102407467_102408487_102408620_102414635_102414794_102424978_102425292_102428249_102428383_102431795_102432129_102434234_102435212_102438021_102438206_102440435_102440610_102443646_102443828_102445805_102445948_102449628_102449870_102450559_102450650_102452393_102452628_102465140_102465290_102496978_102497121_102497569_102497720_102498102
transcript_61735.known	chr14	+	4281	17	FSM	ENSG00000196663.16	ENST00000558678.1	4281	17	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	8.21940349113	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGTCATGGAGAAAATGC	102362060	True	NA	NA	False	AATAAA	-42	NA	102363078	102465671	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_102363117_102376649_102376941_102407337_102407467_102408487_102408620_102414635_102414794_102424978_102425292_102428249_102428383_102431795_102432129_102434234_102435212_102438021_102438206_102440435_102440610_102443646_102443828_102445805_102445948_102449628_102449870_102450559_102450650_102452393_102452628_102465140
transcript_61736.known	chr14	-	6705	4	FSM	ENSG00000156381.9	ENST00000286918.9	6705	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	63.2051334061474	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTATGAATTTGCGAGTC	-102508190	True	NA	-8	True	AATAAA	-15	NA	102509776	102501766	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_102507943_102508474_102508550_102508640_102508847_102509528
transcript_61739.known	chr14	-	1413	3	FSM	ENSG00000156381.9	ENST00000560748.5	1413	3	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_2	58	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTTTATATATATTGATC	-102508213	True	NA	-34	True	NA	NA	NA	102509799	102506875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_102507943_102508474_102508550_102509528
transcript_61740.known	chr14	-	1502	3	FSM	ENSG00000156381.9	ENST00000559404.5	1502	3	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_2	48.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTGGGTGAGGACAAGT	-102509217	False	NA	NA	False	NA	NA	NA	102509235	102507110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_102507943_102508474_102508550_102508640
transcript_61742.known	chr14	+	7806	12	FSM	ENSG00000131323.16	ENST00000392745.8	7806	12	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_6	5.17144096484651	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGATCACACCGTCTC	102777437	True	NA	22	True	AATAAA	-19	NA	102777448	102911500	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_102777676_102830333_102830473_102870184_102870447_102871916_102871969_102875623_102875729_102876357_102876526_102886188_102886270_102889559_102889635_102891324_102891418_102897260_102897402_102903254_102903430_102905212
transcript_61744.known	chr14	+	1786	8	FSM	ENSG00000131323.16	ENST00000539721.5	1786	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	14.3199589555905	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGAGAAGGTTTTCATTT	102777579	True	NA	NA	False	GATAAA	-8	NA	102777601	102906021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_102777676_102870184_102870447_102871916_102871969_102875623_102875729_102876357_102876526_102897260_102897402_102903254_102903430_102905212
transcript_61750.nic	chr14	-	1867	11	ISM	ENSG00000198752.11	ENST00000361246.7	6844	37	-25	43345	-25	10573	5prime_fragment	FALSE	canonical	3	18	junction_9	7.78524244966077	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTAAATGAAGAAATCGAAC	-103051793	True	NA	NA	False	GATAAA	-12	NA	103057574	102975724	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_102975804_102975882_102976050_102978125_102978206_102980772_102981022_102983555_102983757_102986486_102986581_102999564_102999714_103003927_103004024_103008471_103008556_103012096_103012189_103056998
transcript_61754.nic	chr14	+	1368	8	ISM	ENSG00000166126.11	ENST00000541086.5	2269	11	5697	-1	-26	0	3prime_fragment	FALSE	canonical	2	11	junction_1	2.20389266007736	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTGTCAGCCTGGCTAT	102928473	True	NA	2	True	AGTAAA	-14	NA	102928618	102930842	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_102928976_102929120_102929259_102929427_102929537_102929654_102929738_102929923_102930087_102930164_102930328_102930405_102930494_102930575
transcript_61755.nic	chr14	+	1495	7	NIC	ENSG00000166126.11	novel	1550	12	NA	NA	-8	0	intron_retention	FALSE	canonical	2	11	junction_1	2.21108319357027	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTGTCAGCCTGGCTAT	102928491	True	NA	2	True	AGTAAA	-14	NA	102928636	102930842	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_102929259_102929427_102929537_102929654_102929738_102929923_102930087_102930164_102930328_102930405_102930494_102930575
transcript_61764.known	chr14	-	1558	3	FSM	ENSG00000251533.2	ENST00000514902.2	1558	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	4	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCTTCTTTTATTCAT	-103188835	False	NA	-4	True	AATAAA	-13	NA	103189028	103187220	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_103188271_103188376_103188448_103188591
transcript_61765.nic	chr14	-	2105	2	ISM	ENSG00000251533.2	ENST00000514902.2	1558	3	-403	0	-403	0	intron_retention	FALSE	canonical	3	14	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCTTCTTTTATTCAT	NA	False	NA	-4	True	AATAAA	-13	NA	103189431	103187220	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_103188271_103188376
transcript_61769.known	chr14	+	5710	12	FSM	ENSG00000100664.11	ENST00000216554.8	5710	12	0	0	0	0	multi-exon	FALSE	canonical	3	1325	junction_1	235.608689452351	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGAGTCACTTGTGTTCAA	103312236	True	NA	10	True	AATAAA	-22	NA	103334236	103345025	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103334261_103334388_103334598_103335652_103335933_103336035_103336118_103336676_103336850_103337115_103337228_103338326_103338473_103338734_103338894_103339171_103339334_103339638_103339804_103340426_103340562_103340962
transcript_6178.known	chr1	+	4865	11	FSM	ENSG00000084652.16	ENST00000373610.8	4865	11	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	28.9117623122493	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTCTCTCCTGACCTG	32168226	True	NA	9	True	AATAAA	-16	NA	32179674	32198285	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32179777_32180313_32180515_32181241_32181578_32184524_32184617_32187953_32188125_32190054_32190250_32192310_32192431_32192656_32192732_32193207_32193301_32194064_32194161_32194901
transcript_61785.nic	chr14	+	1118	7	ISM	ENSG00000100664.11	ENST00000216554.8	5710	12	-216	6677	-168	0	5prime_fragment	FALSE	canonical	3	1325	junction_1	285.194913855224	1072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAGAAAAAGAAAAGA	103334007	False	NA	NA	False	NA	NA	NA	103334020	103338348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_+_103334261_103334388_103334598_103335652_103335933_103336035_103336118_103336676_103336850_103337115_103337228_103338326
transcript_61790.nic	chr14	+	748	6	NIC	ENSG00000100664.11	novel	5710	12	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_1	811.863929485724	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAGAAAAAGAAAAGA	103312181	True	NA	NA	False	NA	NA	NA	103334181	103338348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_103334261_103335652_103335933_103336035_103336118_103336676_103336850_103337115_103337228_103338326
transcript_61800.known	chr14	+	3481	18	FSM	ENSG00000075413.19	ENST00000429436.7	3481	18	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_16	233.578287965719	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCATTGTCTCCTAATG	103378054	True	NA	11	True	ATTAAA	-23	NA	103385414	103503831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103386081_103405075_103405268_103428386_103428441_103448918_103448968_103451917_103451984_103457141_103457213_103462404_103462462_103465556_103465794_103465971_103466092_103466342_103466443_103467078_103467192_103468032_103468187_103474992_103475211_103480386_103480491_103491776_103492035_103498501_103498529_103500155_103500201_103502881
transcript_61808.known	chr14	+	2969	17	FSM	ENSG00000075413.19	ENST00000416682.6	2969	17	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_6	220.023010160301	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTGGGAGCGAAAGCTG	103378092	True	NA	35	True	ATTAAA	-17	NA	103385452	103503360	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103386081_103405075_103405268_103428386_103428441_103448918_103448968_103451917_103451984_103457141_103457213_103458726_103458796_103462404_103462462_103465556_103465794_103465971_103466092_103466342_103466443_103467078_103467192_103468032_103468187_103474992_103475211_103480386_103480491_103491776_103492035_103502881
transcript_61810.known	chr14	+	2968	17	FSM	ENSG00000075413.19	ENST00000676938.1	2968	17	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_16	210.185994642245	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAAGTCTGAGGACGAG	103378028	True	NA	12	True	NA	NA	NA	103385388	103503337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103386081_103405075_103405268_103428386_103428441_103448918_103448968_103451917_103451984_103457141_103457213_103462404_103462462_103465556_103465794_103465971_103466092_103466342_103466443_103467078_103467192_103468032_103468187_103474992_103475211_103480386_103480491_103491776_103492035_103498501_103498529_103502881
transcript_61813.known	chr14	+	3413	17	FSM	ENSG00000075413.19	ENST00000677228.1	3413	17	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_11	243.31319034066	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGTAAAATCTTGCATT	103378031	True	NA	0	True	ATTAAA	-12	NA	103385391	103503820	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103386081_103405075_103405268_103428386_103428441_103448918_103448968_103451917_103451984_103457141_103457213_103462404_103462462_103465556_103465794_103465971_103466092_103466342_103466443_103467078_103467192_103468085_103468187_103474992_103475211_103480386_103480491_103491776_103492035_103500155_103500201_103502881
transcript_61819.known	chr14	+	3283	16	FSM	ENSG00000075413.19	ENST00000303622.13	3283	16	0	0	0	0	multi-exon	FALSE	canonical	3	478	junction_11	81.2257758760522	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCATTGTCTCCTAATG	103385529	False	NA	11	True	ATTAAA	-23	NA	103385540	103503831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103386081_103405075_103405268_103428386_103428441_103448918_103448968_103451917_103451984_103457141_103457213_103462404_103462462_103465556_103465794_103465971_103466092_103466342_103466443_103467078_103467192_103468032_103468187_103474992_103475211_103480386_103480491_103491776_103492035_103502881
transcript_61822.known	chr14	+	2911	16	FSM	ENSG00000075413.19	ENST00000216288.11	2911	16	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_11	123.794273786077	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATCTTGCATTGTCTCC	103385847	False	NA	6	True	ATTAAA	-18	NA	103385859	103503826	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103386081_103405075_103405268_103428386_103428441_103448918_103448968_103451917_103451984_103457141_103457213_103462404_103462462_103465556_103465794_103465971_103466092_103466342_103466443_103467078_103467192_103468080_103468187_103474992_103475211_103480386_103480491_103491776_103492035_103502881
transcript_61826.known	chr14	+	2643	16	FSM	ENSG00000075413.19	ENST00000440884.7	2643	16	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	253.259673501768	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAATTAAAGTGTTTTCC	103378031	True	NA	-17	True	NA	NA	NA	103385391	103503252	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103386081_103405075_103405268_103428386_103428441_103448918_103448968_103451917_103451984_103457141_103457213_103462404_103462462_103465971_103466092_103466342_103466443_103467078_103467192_103468032_103468187_103474992_103475211_103480386_103480491_103491776_103492035_103498501_103498529_103502881
transcript_61828.known	chr14	+	3334	16	FSM	ENSG00000075413.19	ENST00000678237.1	3334	16	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	279.211508836342	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATAATTAAAAATTCACT	103378064	True	NA	-23	True	NA	NA	NA	103385424	103503797	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103386081_103405075_103405268_103451917_103451984_103457141_103457213_103462404_103462462_103465556_103465794_103465971_103466092_103466342_103466443_103467078_103467192_103468032_103468187_103474992_103475211_103480386_103480491_103491776_103492035_103498501_103498529_103500155_103500201_103502881
transcript_61831.known	chr14	+	2625	15	FSM	ENSG00000075413.19	ENST00000560417.6	2625	15	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_14	169.629608505215	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAAATGTATAGAATAATA	103378031	True	NA	13	True	ATTAAA	-20	NA	103385391	103503282	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103386081_103405075_103405268_103428386_103428441_103448918_103448968_103451917_103451984_103457141_103457213_103462404_103462462_103465556_103465794_103465971_103466092_103466342_103466443_103467078_103467192_103468032_103468187_103474992_103475211_103480386_103480491_103502881
transcript_61839.known	chr14	+	3286	15	FSM	ENSG00000075413.19	ENST00000678302.1	3286	15	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_5	178.214042370289	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTAAGTAGATTCACAA	103378054	True	NA	-41	True	TTTAAA	-31	NA	103385414	103503779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103386081_103405075_103405268_103428386_103428441_103448918_103448968_103451917_103451984_103462404_103462462_103465556_103465794_103465971_103466092_103466342_103466443_103467078_103467192_103468032_103468187_103474992_103475211_103480386_103480491_103491776_103492035_103502881
transcript_6184.nnic	chr1	+	4616	10	NIC	ENSG00000084652.16	novel	4865	11	NA	NA	48	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	59.5379327160321	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTCTCTCCTGACCTG	32168274	True	NA	9	True	AATAAA	-16	NA	32179722	32198285	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_32179777_32181241_32181578_32184524_32184617_32187953_32188125_32190054_32190250_32192310_32192431_32192656_32192732_32193207_32193301_32194064_32194161_32194901
transcript_61841.known	chr14	+	3334	15	FSM	ENSG00000075413.19	ENST00000676694.1	3334	15	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	175.444988180201	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTAAGTAGATTCACAA	103378028	True	NA	-41	True	TTTAAA	-31	NA	103385388	103503779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103386081_103405075_103405268_103428386_103428441_103451917_103451984_103457141_103457213_103462404_103462462_103465556_103465794_103465971_103466092_103466342_103466443_103467078_103467192_103468032_103468187_103474992_103475211_103480386_103480491_103491776_103492035_103502881
transcript_61850.known	chr14	+	3165	15	FSM	ENSG00000075413.19	ENST00000677829.1	3165	15	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	174.882482407648	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTAAGTAGATTCACAA	103378054	True	NA	-41	True	TTTAAA	-31	NA	103385414	103503779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103386081_103428386_103428441_103448918_103448968_103451917_103451984_103457141_103457213_103462404_103462462_103465556_103465794_103465971_103466092_103466342_103466443_103467078_103467192_103468032_103468187_103474992_103475211_103480386_103480491_103491776_103492035_103502881
transcript_61863.known	chr14	+	3637	18	FSM	ENSG00000075413.19	ENST00000678179.1	3637	18	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_14	263.766949143003	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGTAAAATCTTGCATT	103378016	True	NA	0	True	ATTAAA	-12	NA	103385376	103503820	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103386081_103405075_103405268_103428386_103428441_103448918_103448968_103451917_103451984_103457141_103457213_103462404_103462462_103465556_103465794_103465971_103466092_103466342_103466443_103467078_103467192_103468032_103468187_103474992_103475211_103480386_103480491_103490951_103491108_103491776_103492035_103500155_103500201_103502881
transcript_61868.known	chr14	+	2430	8	FSM	ENSG00000075413.19	ENST00000558223.6	2430	8	0	0	0	0	multi-exon	FALSE	canonical	3	521	junction_2	49.80082779412	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATCTCTACTAAAACTACA	103378054	True	NA	NA	False	NA	NA	NA	103385414	103466831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103386081_103405075_103405268_103428386_103428441_103448918_103448968_103451917_103451984_103457141_103457213_103462404_103462462_103465556
transcript_6187.nic	chr1	+	2258	6	ISM	ENSG00000084652.16	ENST00000373610.8	4865	11	-297	7172	-297	-7172	5prime_fragment	FALSE	canonical	3	95	junction_1	37.7200212089018	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGATGTCACTCCCTTTG	32179356	False	NA	NA	False	NA	NA	NA	32179377	32191113	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_32179777_32180313_32180515_32181241_32181578_32184524_32184617_32187953_32188125_32190054
transcript_61872.known	chr14	+	2081	6	FSM	ENSG00000075413.19	ENST00000559328.6	2081	6	0	0	0	0	multi-exon	FALSE	canonical	3	521	junction_2	44.3729647420589	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTAATCCCAGCACTTT	103378054	True	NA	NA	False	NA	NA	NA	103385414	103458195	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103386081_103405075_103405268_103428386_103428441_103448918_103448968_103451917_103451984_103457141
transcript_61875.known	chr14	+	3230	16	FSM	ENSG00000075413.19	ENST00000678619.1	3230	16	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	252.332708057349	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTCACAAGATAATTAAAAAT	103378029	True	NA	-28	True	TTTAAA	-44	NA	103385389	103503792	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103386081_103428386_103428441_103448918_103448968_103451917_103451984_103457141_103457213_103462404_103462462_103465556_103465794_103465971_103466092_103466342_103466443_103467078_103467192_103468032_103468187_103474992_103475211_103480386_103480491_103491776_103492035_103498501_103498529_103502881
transcript_61876.known	chr14	-	1420	8	FSM	ENSG00000166165.14	ENST00000348956.7	1420	8	0	0	0	0	multi-exon	FALSE	canonical	3	1706	junction_7	276.78968660744	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTCTGAGTGGTGCCTCT	-103455284	True	NA	-9	True	AATAAA	-19	NA	103522830	103519666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_103520043_103520121_103520312_103520468_103520593_103521262_103521435_103521817_103521951_103522022_103522178_103522300_103522506_103522765
transcript_61877.nic	chr14	-	1308	6	ISM	ENSG00000166165.14	ENST00000348956.7	1420	8	495	0	-33	0	intron_retention	FALSE	canonical	3	2115	junction_5	187.524505065338	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTCTGAGTGGTGCCTCT	-103522255	False	NA	-9	True	AATAAA	-19	NA	103522335	103519666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr14_-_103520043_103520121_103520312_103520468_103520593_103521262_103521435_103521817_103521951_103522022
transcript_6188.nic	chr1	+	503	3	ISM	ENSG00000084652.16	ENST00000373610.8	4865	11	60	16784	60	-16784	5prime_fragment	FALSE	canonical	3	95	junction_1	39.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATCCGGCAGAGTGACGA	32168286	True	NA	NA	False	NA	NA	NA	32179734	32181501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_32179777_32180313_32180515_32181241
transcript_61880.known	chr14	-	735	3	FSM	ENSG00000166165.14	ENST00000554282.5	735	3	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_2	1282.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGCCTGCCTGCGTCTG	-103521363	False	NA	-21	True	AATAAA	-7	NA	103521443	103519678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_103520043_103520121_103520312_103521262
transcript_61881.known	chr14	-	1170	4	FSM	ENSG00000166165.14	ENST00000553528.5	1170	4	0	0	0	0	multi-exon	FALSE	canonical	3	2346	junction_3	127.50947677199	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAAATAAACTAGGGTTTT	-103521690	False	NA	21	True	NA	NA	NA	103521770	103519694	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_103520043_103520121_103520312_103520468_103520593_103521262
transcript_61882.known	chr14	-	4063	1	FSM	ENSG00000260285.1	ENST00000568177.1	4063	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATACTTTGTCTCTGTGTCT	-103528992	True	NA	-3	True	NA	NA	NA	103529072	103525009	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_103525000_103529100
transcript_61883.nnic	chr14	+	2103	5	NNC	ENSG00000166166.13	novel	3217	4	NA	NA	0	-1030	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	60.4540114467187	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTCTGAGTGATCCCTA	103525632	True	NA	14	True	AATAAA	-14	NA	103529195	103536043	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_+_103529262_103529949_103530150_103530233_103530310_103532581_103532849_103534549
transcript_6189.known	chr1	+	5012	10	FSM	ENSG00000084652.16	ENST00000373609.1	5012	10	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	8.73053390247253	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTCTCTCCTGACCTG	32179030	True	NA	9	True	AATAAA	-16	NA	32180064	32198285	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32180515_32181241_32181578_32184524_32184617_32187953_32188125_32190054_32190250_32192310_32192431_32192656_32192732_32193207_32193301_32194064_32194161_32194901
transcript_61890.known	chr14	+	3217	4	FSM	ENSG00000166166.13	ENST00000389749.9	3217	4	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	6.53197264742181	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCCTTCAAATGTCCTTT	103525632	True	NA	3	True	ATTAAA	-19	NA	103529195	103537073	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103529262_103529949_103530310_103532581_103532849_103534549
transcript_61892.nnic	chr14	+	2008	4	NNC	ENSG00000166166.13	novel	3217	4	NA	NA	-21	-1030	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	64.6649484307809	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTCTGAGTGATCCCTA	103525611	True	NA	14	True	AATAAA	-14	NA	103529174	103536043	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_+_103529262_103530149_103530310_103532581_103532849_103534549
transcript_61896.known	chr14	+	2827	3	FSM	ENSG00000166166.13	ENST00000299202.4	2827	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	69.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCCTTCAAATGTCCTTT	103525662	True	NA	3	True	ATTAAA	-19	NA	103529225	103537073	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103529262_103532581_103532849_103534549
transcript_6190.known	chr1	+	880	6	FSM	ENSG00000160050.16	ENST00000373602.10	880	6	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_1	15.2	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCTCCGTGTCCTGCTTC	32197182	True	NA	NA	False	ATTAAA	-16	NA	32200594	32205387	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32200710_32201912_32202100_32203878_32204046_32204185_32204380_32204597_32204621_32205193
transcript_61903.known	chr14	+	2467	17	FSM	ENSG00000126214.22	ENST00000555836.5	2467	17	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_15	114.953234377072	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAAATTAAAAGTTT	103621238	True	NA	-11	True	NA	NA	NA	103629236	103701514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679519_103687080_103687212_103692358_103692426_103700654_103700728_103701200
transcript_61906.known	chr14	+	2524	17	FSM	ENSG00000126214.22	ENST00000334553.11	2550	17	26	0	0	0	multi-exon	FALSE	canonical	2	20	junction_15	116.639250871008	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTACTTGAAAGTTTTT	103621238	True	NA	19	True	ATTAAA	-16	NA	103629236	103701544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679546_103687080_103687212_103692358_103692426_103700654_103700728_103701200
transcript_6191.known	chr1	+	1415	5	FSM	ENSG00000160050.16	ENST00000421922.6	1415	5	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_1	12.49749974995	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCTCCGTGTCCTGCTTC	32197220	True	NA	NA	False	ATTAAA	-16	NA	32200632	32205387	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32200710_32201912_32202100_32203878_32204046_32204185_32204380_32204597
transcript_61914.known	chr14	+	2271	16	FSM	ENSG00000126214.22	ENST00000347839.10	2271	16	0	0	0	0	multi-exon	FALSE	canonical	2	42	junction_15	115.478636792939	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAACCTTGGAGGTGCCTT	103621238	True	NA	NA	False	NA	NA	NA	103629236	103693743	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679519_103687080_103687212_103692358_103692426_103693552
transcript_61916.known	chr14	+	2426	16	FSM	ENSG00000126214.22	ENST00000554280.5	2426	16	0	0	0	0	multi-exon	FALSE	canonical	2	60	junction_14	95.8511809467619	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTACTTGAAAGTTTTT	103621242	True	NA	19	True	ATTAAA	-16	NA	103629240	103701544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679519_103687080_103687212_103700654_103700728_103701200
transcript_61919.known	chr14	+	2294	16	FSM	ENSG00000126214.22	ENST00000246489.11	2294	16	0	0	0	0	multi-exon	FALSE	canonical	2	42	junction_15	117.267140419737	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAACCTTGGAGGTGCCTT	103621242	True	NA	NA	False	NA	NA	NA	103629240	103693743	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679546_103687080_103687212_103692358_103692426_103693552
transcript_6192.known	chr1	+	633	5	FSM	ENSG00000160050.16	ENST00000681230.1	633	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	171.42345230452	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCTCCGTGTCCTGCTTC	32197235	True	NA	NA	False	ATTAAA	-16	NA	32200647	32205387	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32200710_32201912_32202100_32203878_32204046_32204597_32204621_32205193
transcript_61920.known	chr14	+	2453	16	FSM	ENSG00000126214.22	ENST00000452929.6	2453	16	0	0	0	0	multi-exon	FALSE	canonical	2	47	junction_13	98.1666610073569	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTACTTGAAAGTTTTT	103621242	True	NA	19	True	ATTAAA	-16	NA	103629240	103701544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679546_103687080_103687212_103700654_103700728_103701200
transcript_6193.known	chr1	+	2012	5	FSM	ENSG00000160051.12	ENST00000291358.11	2012	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	6.18465843842649	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGAGTCTGGCTGCTTTC	32204898	True	NA	7	True	AATAAA	-14	NA	32205670	32208682	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32205724_32206153_32206298_32206508_32206762_32207001_32207121_32207239
transcript_61932.known	chr14	+	2416	15	FSM	ENSG00000126214.22	ENST00000445352.8	2416	15	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_5	114.459867309419	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCTTTCTAACTTCTA	103621298	True	NA	-22	True	NA	NA	NA	103629296	103686186	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662922_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679519_103684985_103685037_103685637
transcript_61935.known	chr14	+	2265	15	FSM	ENSG00000126214.22	ENST00000557450.5	2265	15	0	0	0	0	multi-exon	FALSE	canonical	2	81	junction_13	70.1575850118423	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAAATTAAAAGTTT	103621242	True	NA	-11	True	NA	NA	NA	103629240	103701514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679519_103700654_103700728_103701200
transcript_61936.known	chr14	+	3250	15	FSM	ENSG00000126214.22	ENST00000389744.8	3250	15	0	0	0	0	multi-exon	FALSE	canonical	2	91	junction_13	81.0585578203706	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCACGTACATGGTAATT	103621228	True	NA	NA	False	AAAAAG	-21	NA	103629226	103686917	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679546_103684985_103685037_103685637
transcript_61939.known	chr14	+	15091	15	FSM	ENSG00000126214.22	ENST00000348520.10	15091	15	0	0	0	0	multi-exon	FALSE	canonical	2	71	junction_13	72.5303947546496	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGATCATCTCCTTATTT	103621178	True	NA	9	True	AATAAA	-23	NA	103629176	103714249	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679546_103700654_103700728_103701200
transcript_6194.known	chr1	+	2252	5	FSM	ENSG00000160051.12	ENST00000537469.2	2252	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	14.956186011146	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGAGTCTGGCTGCTTTC	32204898	True	NA	7	True	AATAAA	-14	NA	32205670	32208682	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32205964_32206153_32206298_32206508_32206762_32207001_32207121_32207239
transcript_61943.nnic	chr14	+	2351	15	NNC	ENSG00000126214.22	novel	2426	16	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	2	65	junction_12	94.9290820151807	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTACTTGAAAGTTTTT	103621162	True	NA	19	True	ATTAAA	-16	NA	103629160	103701544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679407_103679519_103700654_103700728_103701200
transcript_6195.known	chr1	+	2089	4	FSM	ENSG00000160051.12	ENST00000617816.1	2089	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	5.09901951359278	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAAGATGATGCCACTGC	32204898	True	NA	NA	False	NA	NA	NA	32205670	32208548	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32205724_32206153_32206762_32207001_32207121_32207239
transcript_61950.known	chr14	+	2322	14	FSM	ENSG00000126214.22	ENST00000380038.7	2322	14	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_12	109.32071053318	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTGTAAAGCCTTTTAC	103621204	True	NA	71	True	NA	NA	NA	103629202	103685316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679308_103679519_103684985
transcript_61955.known	chr14	+	3135	14	FSM	ENSG00000126214.22	ENST00000553286.5	3135	14	0	0	0	0	multi-exon	FALSE	canonical	2	91	junction_13	70.2582724814025	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCCGACTGACCTGTG	103621238	True	NA	3	True	AATAAA	-1	NA	103629236	103686211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679546_103684985
transcript_6197.known	chr1	+	2214	12	FSM	ENSG00000084623.12	ENST00000678063.1	2214	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	656.310108620678	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTAAGCCCTTCTGAA	32207676	True	NA	NA	False	AATAAA	-16	NA	32222406	32236167	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32234423_32234550_32235010
transcript_61972.known	chr14	+	2188	14	FSM	ENSG00000126214.22	ENST00000557575.5	2188	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_13	92.5569711010915	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCGATTAGCTGTTCACTT	103621238	True	NA	34	True	AATAAA	-38	NA	103629236	103685916	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103629495_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679546_103685637
transcript_61973.known	chr14	-	4684	2	FSM	ENSG00000166170.12	ENST00000299204.6	4684	2	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGCTGTGAGTCTGAGG	-103556518	True	NA	-7	True	AATAAA	-26	NA	103562657	103556550	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_103561193_103562615
transcript_61983.known	chr14	+	2506	5	FSM	ENSG00000256053.9	ENST00000674165.1	2506	5	0	0	0	0	multi-exon	FALSE	canonical	3	427	junction_2	55.5309598332318	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGATT	103558257	True	NA	NA	False	NA	NA	NA	103562962	103592171	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103563125_103571622_103571821_103574106_103574171_103587273_103587365_103590180
transcript_61987.known	chr14	+	906	5	FSM	ENSG00000256053.9	ENST00000477116.5	906	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	212.117155128952	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCCCGTTTCCTGTGTTTC	103558467	False	NA	21	True	AATAAA	-14	NA	103563172	103590526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103563380_103571622_103571821_103574106_103574171_103587273_103587365_103590180
transcript_61988.known	chr14	+	782	4	FSM	ENSG00000256053.9	ENST00000458117.6	782	4	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_2	209.19103443716	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGTTTCCTGTGTTTCG	103558273	True	NA	22	True	AATAAA	-15	NA	103562978	103590527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103563125_103571622_103571821_103587273_103587365_103590180
transcript_61990.known	chr14	+	575	3	FSM	ENSG00000256053.9	ENST00000440963.2	575	3	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	216.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAATAAAGCCCAAGCACT	103558259	True	NA	-1	True	NA	NA	NA	103562964	103590504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103563125_103587273_103587365_103590180
transcript_62.known	ERCC-00164	+	1007	1	FSM	ERCC-00164A	DQ516779	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00164_+_0_1000
transcript_6200.known	chr1	+	1416	11	FSM	ENSG00000084623.12	ENST00000677378.1	1416	11	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	521.012667792253	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	32207676	True	NA	31	True	AATAAA	-32	NA	32222406	32231602	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32222445_32222540_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_62009.known	chr14	-	2567	10	FSM	ENSG00000126215.14	ENST00000555055.6	2567	10	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_9	78.2163823577632	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCAGGACCTGCTTCTTG	-103711887	True	NA	-33	True	AATAAA	-16	NA	103715451	103697616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_103699018_103699132_103699180_103699363_103699577_103703172_103703328_103707002_103707216_103708521_103708660_103711032_103711246_103711465_103711568_103712874_103712932_103715423
transcript_62017.known	chr14	-	2563	9	FSM	ENSG00000126215.14	ENST00000352127.11	2563	9	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_8	72.1481765188837	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCAGGACCTGCTTCTTG	NA	False	NA	-33	True	AATAAA	-16	NA	103715504	103697616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_103699018_103699132_103699180_103699363_103699577_103703172_103703328_103707002_103707216_103708521_103708660_103711032_103711246_103711465_103711568_103715423
transcript_62018.nic	chr14	-	2641	9	NIC	ENSG00000126215.14	novel	2563	9	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_8	91.3837205141047	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCAGGACCTGCTTCTTG	-103711924	True	NA	-33	True	AATAAA	-16	NA	103715488	103697616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_103699018_103699132_103699180_103699363_103699577_103703172_103703328_103707002_103707216_103708521_103708660_103711032_103711246_103711465_103711662_103715423
transcript_6203.known	chr1	+	1276	11	FSM	ENSG00000084623.12	ENST00000678689.1	1276	11	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_10	525.025561282496	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	32207674	True	NA	31	True	AATAAA	-32	NA	32222404	32231602	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231259
transcript_62030.known	chr14	-	2599	8	FSM	ENSG00000126215.14	ENST00000557439.5	2599	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	129.816353801382	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGGCTTTTAATAGAAGC	-103711919	True	NA	NA	False	AATAAA	-12	NA	103715483	103704395	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_103706043_103706206_103706376_103707002_103707216_103708521_103708660_103711032_103711246_103711465_103711568_103712874_103712932_103715423
transcript_6204.known	chr1	-	1538	11	FSM	ENSG00000160055.20	ENST00000491434.5	1538	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	16.7812395251364	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGCTGTGCCAAATATAC	-32221839	True	NA	-5	True	AATATA	-13	NA	32222333	32214476	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32215050_32215135_32215217_32215672_32215796_32216193_32216282_32216383_32216518_32216888_32216948_32217258_32217352_32217436_32217578_32221130_32221198_32221866_32222019_32222306
transcript_62042.known	chr14	-	746	6	FSM	ENSG00000126215.14	ENST00000553361.5	746	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	129.380678619336	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCTCACTTCCCACACAG	-103711895	True	NA	NA	False	NA	NA	NA	103715459	103706331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_103706376_103707002_103707216_103708521_103708660_103711032_103711246_103711465_103711568_103715423
transcript_62048.known	chr14	-	2539	10	FSM	ENSG00000126215.14	ENST00000554913.5	2539	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	107.481379380711	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGCTTCTTGCTGTCTGC	-103711879	True	NA	-25	True	AATAAA	-24	NA	103715443	103697608	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_103699018_103699132_103699180_103699363_103699577_103703172_103703328_103707002_103707216_103708521_103708660_103711032_103711181_103711465_103711568_103712874_103712969_103715423
transcript_62049.known	chr14	-	5500	17	FSM	ENSG00000088808.18	ENST00000202556.14	5500	17	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	5.85101486923423	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGAACATATTGCACTAG	-103846969	True	NA	NA	False	AATAAA	-1	NA	103847575	103733194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_103735196_103736002_103736203_103737693_103737861_103738678_103738813_103738885_103739024_103739823_103740594_103741789_103742292_103742653_103742824_103746372_103746554_103749793_103749935_103752999_103753197_103754069_103754245_103757649_103757752_103778744_103778822_103784794_103784915_103797370_103797519_103847298
transcript_6205.known	chr1	+	1256	10	FSM	ENSG00000084623.12	ENST00000678968.1	1256	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	564.102521108519	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGGTGTCTGTTTCAT	32207676	True	NA	33	True	AATAAA	-34	NA	32222406	32231604	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226284_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_62055.known	chr14	+	1521	8	FSM	ENSG00000100711.14	ENST00000216602.10	1521	8	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_5	252.243080041002	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGCCTCGCCTTCCTGTG	103703763	True	NA	24	True	ATTAAA	-21	NA	103715729	103733668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103715980_103726791_103726843_103727745_103727915_103728907_103728984_103729090_103729183_103729792_103729847_103732619_103732763_103732982
transcript_62057.known	chr14	+	1383	7	FSM	ENSG00000100711.14	ENST00000311141.7	1383	7	0	0	0	0	multi-exon	TRUE	canonical	3	619	junction_5	133.291243356627	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGACAAGGCCTCGCCTTCC	103703843	True	NA	20	True	ATTAAA	-17	NA	103715809	103733664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103715980_103726791_103726843_103727745_103727915_103728907_103728984_103729090_103729183_103732619_103732763_103732982
transcript_6207.known	chr1	+	1400	10	FSM	ENSG00000084623.12	ENST00000678883.1	1400	10	0	0	0	0	multi-exon	FALSE	canonical	3	1054	junction_1	219.738115733645	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGTGGATCTCCAACCA	32207693	True	NA	-66	True	AAAAAG	-2	NA	32222423	32231505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926
transcript_62070.known	chr14	+	566	5	FSM	ENSG00000100711.14	ENST00000554630.5	566	5	0	0	0	0	multi-exon	FALSE	canonical	3	926	junction_4	17.3691536926817	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGGGTTTGGTGCCATGC	103703864	True	NA	NA	False	NA	NA	NA	103715830	103729211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103715980_103726791_103726843_103727745_103727915_103728907_103728984_103729090
transcript_62079.known	chr14	+	1473	3	FSM	ENSG00000287346.1	ENST00000667526.1	1473	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	3	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAACCAGCACTGGCCTCT	103873063	False	NA	14	True	AATAAA	-21	NA	103873156	103880370	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103873462_103877394_103877596_103879403
transcript_6208.known	chr1	+	1250	10	FSM	ENSG00000084623.12	ENST00000677353.1	1250	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	562.343311509971	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGGTGTCTGTTTCAT	32207697	True	NA	33	True	AATAAA	-34	NA	32222427	32231604	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_62080.known	chr14	+	1292	2	FSM	ENSG00000287346.1	ENST00000660176.1	1292	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCCTCTCGGCCTCTGGG	103873054	False	NA	25	True	AATAAA	-32	NA	103873147	103880381	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_103873462_103879403
transcript_62082.known	chr14	-	749	5	FSM	ENSG00000156411.10	ENST00000555030.5	749	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	2224.02139996449	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTACTTATCTTGTGG	-103886875	True	NA	-27	True	AATAAA	-17	NA	103921520	103912299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_103912695_103913960_103913985_103914478_103914634_103915065_103915190_103921469
transcript_62083.known	chr14	-	842	5	FSM	ENSG00000156411.10	ENST00000414262.6	842	5	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_4	2249.991486095	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTGCTACTTATCTTGT	-103886856	True	NA	-29	True	AATAAA	-15	NA	103921501	103912301	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_103912695_103913960_103913985_103915065_103915190_103920939_103921209_103921469
transcript_62089.known	chr14	-	615	4	FSM	ENSG00000156411.10	ENST00000286953.8	615	4	0	0	0	0	multi-exon	TRUE	canonical	3	4431	junction_1	102.973567266341	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGGCCTCTCTGAGCC	-103886884	True	NA	-15	True	AATAAA	-29	NA	103921529	103912287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_103912695_103913960_103913985_103915065_103915190_103921469
transcript_62092.known	chr14	-	932	3	FSM	ENSG00000156411.10	ENST00000554089.5	932	3	0	0	0	0	multi-exon	FALSE	canonical	3	4527	junction_2	77	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCCAAGTAGCTGGGATT	-103886866	True	NA	NA	False	NA	NA	NA	103921511	103913218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_103913985_103915065_103915190_103921469
transcript_62093.known	chr14	-	271	3	FSM	ENSG00000156411.10	ENST00000553449.1	271	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	2196	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTACCTGGTACTGCTT	-103886893	True	NA	-14	True	AATAAA	-17	NA	103921538	103912516	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_103912695_103913960_103913985_103921469
transcript_62094.known	chr14	+	1791	15	FSM	ENSG00000166183.16	ENST00000546892.6	1791	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1.79710651791559	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCAGCCTGCTCTCATGT	104085617	True	NA	NA	False	GGGGCT	-3	NA	104085690	104112633	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_104085853_104092632_104092742_104093490_104093603_104095530_104095657_104097553_104097638_104098852_104098980_104103562_104103676_104104303_104104487_104104621_104104736_104105327_104105451_104106798_104106895_104107181_104107346_104109228_104109316_104111919_104112001_104112523
transcript_62099.known	chr14	+	6889	15	FSM	ENSG00000066735.15	ENST00000423312.7	6889	15	0	0	0	0	multi-exon	TRUE	canonical	3	48	junction_1	34.0276748112654	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACGGCTGCCGAGTTCAC	104135674	True	NA	46	True	ATTAAA	-16	NA	104138586	104180894	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_104138765_104139042_104139289_104152014_104152462_104157754_104157943_104166858_104167049_104171722_104171936_104172574_104172669_104172976_104173240_104173329_104173514_104173705_104173869_104174147_104174311_104174981_104177899_104178549_104178756_104179235_104179387_104179608
transcript_62100.known	chr14	-	3348	4	FSM	ENSG00000258986.7	ENST00000556573.6	3348	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1.4142135623731	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGTCTATTCCTCAAAA	NA	False	NA	-12	True	AGTAAA	-15	NA	104604772	104590863	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_104593659_104595164_104595244_104596989_104597128_104604436
transcript_62101.known	chr14	+	7578	22	FSM	ENSG00000203485.14	ENST00000330634.11	7578	22	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_6	23.5545394039156	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTTCTCCTGTTGCAGT	104686432	True	NA	30	True	NA	NA	NA	104689605	104722535	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_104689740_104701356_104701757_104703104_104703221_104703294_104703455_104703915_104703950_104706034_104706177_104706909_104707052_104707252_104708003_104708435_104708588_104708670_104708733_104709280_104709384_104709619_104709706_104710087_104710189_104710936_104711008_104711078_104711187_104711628_104711700_104712432_104712554_104712827_104712993_104713206_104713310_104713444_104713607_104714202_104714857_104718794
transcript_62105.known	chr14	+	1689	5	FSM	ENSG00000203485.14	ENST00000398337.8	1689	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	16.4696690920006	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGGTTGCCAGGTACTGT	104686447	True	NA	NA	False	AATAAA	-19	NA	104689620	104704809	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_104689740_104701356_104701757_104703104_104703221_104703294_104703455_104703915
transcript_62109.nic	chr14	+	3046	4	NIC	ENSG00000203485.14	novel	1689	5	NA	NA	6	0	intron_retention	FALSE	canonical	3	46	junction_1	15.9652400197707	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGGTTGCCAGGTACTGT	104686438	True	NA	NA	False	AATAAA	-19	NA	104689611	104704809	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_104689740_104701356_104703221_104703294_104703455_104703915
transcript_62113.known	chr14	+	1723	13	FSM	ENSG00000185100.11	ENST00000330877.7	1723	13	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_6	6.46088659206734	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAGCAGTTGTTACATGT	104723557	True	NA	7	True	AATAAA	-21	NA	104724228	104747310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_104724463_104735019_104735123_104738375_104738439_104739327_104739379_104739749_104739817_104740600_104740709_104740838_104740921_104741116_104741244_104741847_104742003_104743066_104743192_104744811_104744910_104746235_104746386_104746950
transcript_62114.known	chr14	+	856	6	FSM	ENSG00000184990.13	ENST00000553819.5	856	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	716.238954539614	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCGCCAGGGGCCTGAC	104741658	True	NA	NA	False	NA	NA	NA	104753170	104768494	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_104753320_104755629_104755825_104756603_104756761_104766789_104766898_104767863_104768008_104768391
transcript_62116.known	chr14	+	550	4	FSM	ENSG00000184990.13	ENST00000553810.5	550	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	690.987698877484	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGCCCTGCCCCGT	104741647	True	NA	NA	False	GGGGCT	-34	NA	104753159	104757312	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_104753320_104755629_104755825_104756603_104756761_104757274
transcript_62118.known	chr14	+	752	4	FSM	ENSG00000184990.13	ENST00000329967.11	752	4	0	0	0	0	multi-exon	FALSE	canonical	3	1413	junction_3	41.8807831827438	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGAGGACTCTTGTCTGTC	104741634	True	NA	19	True	AATAAA	-17	NA	104753146	104759654	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_104753320_104755629_104755825_104756603_104756761_104759427
transcript_62119.known	chr14	+	1244	3	FSM	ENSG00000184990.13	ENST00000535554.4	1244	3	0	0	0	0	multi-exon	FALSE	canonical	3	1422	junction_2	42	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCAGAGGCCCAGACTCAT	104741634	True	NA	NA	False	NA	NA	NA	104753146	104757479	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_104753320_104755629_104755825_104756603
transcript_62120.known	chr14	+	550	3	FSM	ENSG00000184990.13	ENST00000347067.9	550	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	684	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTCTTGTCTGTCAGCAC	104741646	True	NA	24	True	AATAAA	-22	NA	104753158	104759659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_104753320_104756603_104756761_104759427
transcript_62121.known	chr14	+	4142	2	FSM	ENSG00000184990.13	ENST00000556431.1	4142	2	0	0	0	0	multi-exon	FALSE	canonical	3	1506	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGAGGACTCTTGTCTGT	104741689	True	NA	18	True	AATAAA	-16	NA	104753201	104759653	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_104753320_104755629
transcript_62122.known	chr14	-	2866	15	FSM	ENSG00000142208.18	ENST00000349310.7	2866	15	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_14	266.49600831716	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGCTCACTTTGCTGG	-104791807	True	NA	-4	True	AATAAA	-15	NA	104795751	104769348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_104770421_104770744_104770848_104772364_104772453_104772877_104773093_104773250_104773380_104773454_104773581_104773911_104773981_104774937_104775004_104775075_104775208_104775651_104775800_104776658_104776771_104780087_104780217_104792597_104792723_104793126_104793211_104795483
transcript_62123.known	chr14	-	2957	15	FSM	ENSG00000142208.18	ENST00000649815.2	2957	15	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_14	260.168312867667	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGCTCACTTTGCTGG	-104791804	True	NA	-4	True	AATAAA	-15	NA	104795748	104769348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_104770421_104770744_104770848_104772364_104772453_104772877_104773093_104773250_104773380_104773454_104773581_104773911_104773981_104774937_104775004_104775075_104775208_104775651_104775800_104776658_104776771_104780087_104780217_104792597_104792723_104793126_104793305_104795483
transcript_62124.known	chr14	-	2779	14	FSM	ENSG00000142208.18	ENST00000407796.7	2779	14	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_13	143.630195767097	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGCTCACTTTGCTGG	-104791804	True	NA	-4	True	AATAAA	-15	NA	104795748	104769348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_104770421_104770744_104770848_104772364_104772453_104772877_104773093_104773250_104773380_104773454_104773581_104773911_104773981_104774937_104775004_104775075_104775208_104775651_104775800_104776658_104776771_104780087_104780217_104792597_104792723_104795483
transcript_62125.known	chr14	+	1411	2	FSM	ENSG00000179627.10	ENST00000555360.1	1411	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGGGGTGGAAGGGAAGG	104800326	True	NA	NA	False	NA	NA	NA	104800595	104802486	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_104800701_104801180
transcript_62127.nnic	chr14	+	3489	2	NNC	ENSG00000179627.10	novel	1411	2	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	0	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCAGTGACTATTCCTGAG	104800296	True	NA	12	True	AATAAA	-19	NA	104800565	104804712	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_+_104800701_104801358
transcript_6213.known	chr1	+	1141	9	FSM	ENSG00000084623.12	ENST00000677640.1	1141	9	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_4	555.607761262386	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	32207676	True	NA	31	True	AATAAA	-32	NA	32222406	32231602	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_62132.known	chr14	+	6813	19	NNC	ENSG00000099814.17	novel	6727	19	NA	NA	33	23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	31.0716018969805	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTTTCTCTATCCTTG	104862192	True	NA	53	True	AATAAA	-45	NA	104865312	104896770	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr14_+_104865514_104868423_104868556_104876255_104876346_104877884_104877966_104878444_104878502_104880286_104880426_104882727_104882833_104883031_104883509_104883830_104884550_104885368_104885543_104886039_104886131_104886274_104887979_104889514_104889759_104892975_104893136_104893522_104893667_104893760_104893850_104894284_104894379_104894536_104894589_104894710
transcript_62133.known	chr14	-	18335	7	FSM	ENSG00000185567.7	ENST00000333244.6	18335	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGAAGGCTGCTGAGGTC	-104978194	True	NA	-2	True	AATAAA	-18	NA	104978374	104937252	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_104954800_104954956_104955142_104955482_104955634_104956587_104956690_104957409_104957509_104957613_104957673_104978182
transcript_62135.known	chr14	+	1962	6	FSM	ENSG00000140104.14	ENST00000389964.7	1962	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	5.31413210223457	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGTTGTCACTGGTTC	104986081	False	NA	3	True	AATAAA	-12	NA	104986278	104995514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_104986855_104988942_104989089_104989631_104989708_104991490_104991621_104992947_104993065_104994597
transcript_62137.known	chr14	+	2379	5	FSM	ENSG00000140104.14	ENST00000547315.6	2379	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	3.35410196624968	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTTGTCACTGGTTCAT	104985590	True	NA	5	True	AATAAA	-14	NA	104985787	104995516	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_104986855_104988942_104989089_104991490_104991621_104992947_104993065_104994597
transcript_62139.known	chr14	-	1536	3	FSM	ENSG00000170779.11	ENST00000392590.3	1536	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	297.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAATGTGGTGTTAGTTA	-105014738	True	NA	80	True	ATTAAA	-21	NA	105021060	105009935	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_105010634_105011159_105011936_105020998
transcript_62143.known	chr14	-	2448	2	FSM	ENSG00000170779.11	ENST00000336219.4	2448	2	0	0	0	0	multi-exon	FALSE	canonical	3	596	junction_1	0	987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGTAGTAGTTGTAGTGC	-105014761	True	NA	33	True	NA	NA	NA	105021083	105009572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_105011936_105020998
transcript_62145.known	chr14	-	5773	26	FSM	ENSG00000184916.9	ENST00000331782.8	5773	26	0	0	0	0	multi-exon	TRUE	canonical	2	15	junction_25	7.5835611687386	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGACCTGGTAATTCCTT	-105168575	True	NA	NA	False	AATAAA	-19	NA	105168776	105140994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_105143171_105143481_105143639_105144929_105145062_105145730_105145974_105146384_105146501_105146610_105146725_105147325_105147412_105147499_105147528_105147771_105147889_105148115_105148230_105148325_105148440_105148744_105148859_105148936_105149090_105149169_105149321_105150603_105150778_105150864_105150912_105150990_105151105_105151282_105151397_105151625_105151740_105151937_105152058_105152160_105152292_105155561_105155623_105155737_105155990_105157705_105157764_105167756_105168108_105168354
transcript_62161.nic	chr14	-	839	5	NIC	ENSG00000183828.15	novel	854	5	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	79.0929042329336	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTGCCTGCTGGTTCTG	-105180266	False	NA	-6	True	AATAAA	-17	NA	105181333	105172938	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_-_105173262_105176533_105176772_105176962_105176992_105177691_105177736_105181128
transcript_62162.known	chr14	-	854	5	FSM	ENSG00000183828.15	ENST00000392568.7	854	5	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	5.30919014539883	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTGCCTGCTGGTTCTG	-105180245	True	NA	-6	True	AATAAA	-17	NA	105181312	105172938	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_105173262_105176533_105176772_105176962_105177028_105177691_105177736_105181128
transcript_62163.known	chr14	-	1042	5	FSM	ENSG00000183828.15	ENST00000551024.5	1042	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	75.3139263350411	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGTTGCGGTGAGCCTGA	-105180256	True	NA	NA	False	NA	NA	NA	105181323	105175487	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_105175988_105176533_105176772_105176962_105177028_105177691_105177736_105181128
transcript_62168.known	chr14	-	570	4	FSM	ENSG00000183828.15	ENST00000339418.9	570	4	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_3	4.78423336480244	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGGGATTAGGGGAGGG	-105180176	True	NA	NA	False	NA	NA	NA	105181243	105176425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_105176772_105176962_105177028_105177691_105177736_105181128
transcript_62170.known	chr14	-	3671	18	FSM	ENSG00000185024.18	ENST00000547530.7	3671	18	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_17	7.96358494153904	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTGAGGCTTGTCTGAT	-105300803	True	NA	-18	True	AGTAAA	-31	NA	105301001	105209285	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_105210589_105211121_105211294_105212112_105212165_105217543_105217801_105218997_105219054_105219150_105219233_105220068_105220131_105221647_105221915_105226068_105226162_105226250_105226291_105226633_105226761_105228819_105228914_105241264_105241415_105252506_105252580_105256517_105256550_105272720_105272895_105286295_105286377_105300445
transcript_62171.known	chr14	-	2292	18	FSM	ENSG00000185024.18	ENST00000327359.7	2292	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	16.1094869854461	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGACCCTCCAAGGCTG	-105315466	True	NA	NA	False	NA	NA	NA	105315490	105210277	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_105210589_105211121_105211294_105212112_105212165_105217543_105217801_105218997_105219054_105219150_105219233_105220068_105220131_105221647_105221915_105226068_105226162_105226250_105226291_105226633_105226761_105228819_105228914_105241264_105241415_105252506_105252580_105256517_105256550_105272720_105272895_105286295_105286377_105315321
transcript_62174.known	chr14	-	3314	17	FSM	ENSG00000185024.18	ENST00000379937.6	3314	17	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_16	15.5035278243373	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTGAGGCTTGTCTGAT	-105300492	True	NA	-18	True	AGTAAA	-31	NA	105300725	105209285	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_105210589_105211121_105211294_105212112_105212165_105217543_105217801_105218997_105219054_105219150_105219233_105220068_105220131_105221647_105221915_105226068_105226162_105226250_105226291_105226633_105226761_105228819_105228914_105241264_105241415_105252506_105252580_105256517_105256550_105272720_105272895_105300445
transcript_62182.known	chr14	-	3579	14	FSM	ENSG00000185024.18	ENST00000392557.8	3579	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_13	17.8275765376874	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTGAGGCTTGTCTGAT	-105247877	False	NA	-18	True	AGTAAA	-31	NA	105247894	105209285	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_105210589_105211121_105211294_105212112_105212165_105217543_105217801_105218997_105219054_105219150_105219233_105220068_105220131_105221647_105221915_105226068_105226162_105226250_105226291_105226633_105226761_105228819_105228914_105241264_105241415_105247070
transcript_62188.known	chr14	-	1452	4	FSM	ENSG00000185024.18	ENST00000548421.2	1452	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	3.85861230093008	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGTTTGGTATAGGAGAT	-105301243	False	NA	-3	True	ATTAAA	-18	NA	105301278	105256185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_105256550_105272720_105272895_105286295_105286377_105300445
transcript_62194.known	chr14	+	3708	24	FSM	ENSG00000179364.15	ENST00000325438.12	3708	24	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_15	25.7926148190921	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGATATTTTTAATGCTTT	NA	False	NA	-11	True	AATAAA	-30	NA	105314414	105395206	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_105315038_105348492_105348581_105352377_105352468_105355051_105355178_105367212_105367376_105368073_105368148_105368458_105368540_105369840_105369901_105376767_105376926_105379738_105379830_105380079_105380155_105380956_105381100_105381913_105382047_105382476_105382582_105382806_105382914_105383358_105383514_105384352_105384464_105384878_105384988_105389960_105390004_105391206_105391250_105391630_105391767_105392618_105392846_105393221_105393336_105394553
transcript_62203.known	chr14	+	2871	21	FSM	ENSG00000182979.18	ENST00000331320.12	2871	21	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_17	170.933203328084	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGTCCTTCCCTGTGTCTT	105411165	True	NA	26	True	ATTAAA	-44	NA	105419826	105470729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_105420064_105438671_105438740_105445417_105445512_105449358_105449410_105450057_105450185_105450260_105450325_105454192_105454311_105458269_105458373_105460357_105460458_105460764_105460954_105463183_105463259_105463492_105463552_105464031_105464148_105464415_105464568_105464673_105464864_105465093_105465184_105466425_105466579_105466706_105466743_105469466_105469499_105469840_105469993_105470064
transcript_62204.known	chr14	+	2144	21	FSM	ENSG00000182979.18	ENST00000438610.5	2144	21	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_13	195.503574136127	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCCGCCCCTCGCCCGCCC	105419713	True	NA	NA	False	NA	NA	NA	105420015	105470238	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_105420064_105438671_105438740_105445417_105445512_105449358_105449410_105450057_105450185_105450260_105450325_105454192_105454311_105458269_105458373_105460357_105460458_105460764_105460954_105463183_105463259_105463492_105463552_105464031_105464148_105464462_105464568_105464673_105464864_105465093_105465184_105466425_105466579_105466706_105466743_105469466_105469499_105469840_105469993_105470064
transcript_62208.known	chr14	+	2770	20	FSM	ENSG00000182979.18	ENST00000406191.5	2770	20	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_4	114.099606579544	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGTCCTTCCCTGTGTCTT	105411230	False	NA	26	True	ATTAAA	-44	NA	105419891	105470729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_105420064_105438671_105438740_105445417_105445512_105449358_105449410_105450057_105450185_105450260_105450325_105454192_105454311_105458269_105458373_105460357_105460458_105460764_105460954_105463183_105463259_105463492_105463552_105464031_105464148_105464415_105464568_105464673_105464864_105465093_105465184_105466425_105466579_105469466_105469499_105469840_105469993_105470064
transcript_62212.known	chr14	+	2709	20	FSM	ENSG00000182979.18	ENST00000405646.5	2709	20	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_16	166.622269248196	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGTCCTTCCCTGTGTCTT	105411276	False	NA	26	True	ATTAAA	-44	NA	105419937	105470729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_105420064_105438671_105438740_105445417_105445512_105450057_105450185_105450260_105450325_105454192_105454311_105458269_105458373_105460357_105460458_105460764_105460954_105463183_105463259_105463492_105463552_105464031_105464148_105464415_105464568_105464673_105464864_105465093_105465184_105466425_105466579_105466706_105466743_105469466_105469499_105469840_105469993_105470064
transcript_62221.nic	chr14	+	2760	19	NIC	ENSG00000182979.18	novel	2888	22	NA	NA	22	0	combination_of_known_junctions	FALSE	canonical	3	228	junction_3	97.2401888160839	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCGGTCCTTCCCTGTGTC	105411187	True	NA	24	True	ATTAAA	-42	NA	105419848	105470727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_105420064_105438671_105438740_105445417_105445512_105450057_105450185_105450260_105450325_105454192_105454311_105458269_105458373_105460357_105460458_105460764_105460954_105463183_105463259_105463492_105463552_105464031_105464148_105464415_105464568_105464673_105464864_105465093_105465184_105466425_105466579_105469466_105469499_105469840_105469993_105470064
transcript_62229.nnic	chr14	+	2666	18	NIC	ENSG00000182979.18	novel	2888	22	NA	NA	22	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_2	137.294546095405	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCGGTCCTTCCCTGTGTC	105411187	True	NA	24	True	ATTAAA	-42	NA	105419848	105470727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr14_+_105420064_105438671_105438740_105450057_105450185_105450260_105450325_105454192_105454311_105458269_105458373_105460357_105460458_105460764_105460954_105463183_105463259_105463492_105463552_105464031_105464148_105464415_105464568_105464673_105464864_105465093_105465184_105466425_105466579_105469466_105469499_105469840_105469993_105470064
transcript_6223.known	chr1	+	987	7	FSM	ENSG00000084623.12	ENST00000679290.1	987	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	645.557381906003	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	32207676	True	NA	31	True	AATAAA	-32	NA	32222406	32231602	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32222445_32222537_32222631_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_62234.known	chr14	+	2616	4	FSM	ENSG00000226174.7	ENST00000451127.3	2616	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0.816496580927726	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGGTTTGGTTTCTTTTTC	105398426	True	NA	8	True	CATAAA	-17	NA	105398537	105413859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_105398636_105399301_105399491_105411367_105411497_105411659
transcript_62236.known	chr14	-	572	3	FSM	ENSG00000251602.7	ENST00000661026.1	572	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGAGAACTGACTGCTGG	-105419066	False	NA	NA	False	NA	NA	NA	105419080	105418017	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_105418313_105418681_105418817_105418938
transcript_62240.known	chr14	-	2279	3	FSM	ENSG00000251602.7	ENST00000551271.5	2279	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAATAAATAAATAA	-105419576	True	NA	NA	False	AATAAA	-3	NA	105419739	105416883	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_-_105418310_105418681_105418817_105419021
transcript_62243.known	chr14	+	1178	8	FSM	ENSG00000182809.11	ENST00000329146.9	1178	8	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	4.59369576880387	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTGTCTCTGCTTGTGGG	105474589	True	NA	4	True	AATAAA	-17	NA	105474820	105480162	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_105474906_105478265_105478361_105478449_105478508_105478730_105478872_105478978_105479048_105479124_105479220_105479435_105479494_105479585
transcript_62244.known	chr14	+	1383	7	FSM	ENSG00000182809.11	ENST00000552643.5	1383	7	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	4.95535624910617	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGATTGTCTCTGCTTGTG	105474605	True	NA	2	True	AATAAA	-15	NA	105474836	105480160	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_105474906_105478265_105478361_105478449_105478872_105478978_105479048_105479124_105479220_105479435_105479494_105479585
transcript_62247.known	chr14	+	1920	9	FSM	ENSG00000185347.18	ENST00000392523.9	1920	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_6	27.9228848796108	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTCGGGTTTCCCTGTT	105490520	True	NA	39	True	AATAAA	-39	NA	105491245	105499248	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_105491523_105491621_105491701_105492106_105492310_105492578_105492735_105493834_105493934_105495879_105496087_105497356_105497444_105497797_105497978_105498616
transcript_62248.known	chr14	+	1630	8	FSM	ENSG00000185347.18	ENST00000392522.7	1630	8	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_5	16.119452059356	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGGCTCAGCCTGGTGGT	105490523	True	NA	-41	True	NA	NA	NA	105491248	105499168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_105491523_105491621_105491701_105492106_105492310_105492578_105492735_105493834_105493934_105497356_105497444_105497797_105497978_105498616
transcript_6225.known	chr1	-	969	7	FSM	ENSG00000160055.20	ENST00000483001.5	969	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	16.996731711976	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTTCCAGGGACAAGG	-32221841	True	NA	NA	False	GGGGCT	-30	NA	32222335	32215846	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32216282_32216383_32216518_32216888_32216948_32217258_32217352_32221130_32221198_32221866_32222019_32222306
transcript_62252.known	chr14	+	1553	7	FSM	ENSG00000185347.18	ENST00000354560.10	1553	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	28.4941514466858	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTAGCAGCTTTCCTGCC	105490542	True	NA	0	True	NA	NA	NA	105491267	105499209	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_105491523_105491621_105491701_105492106_105492310_105492578_105492735_105497356_105497444_105497797_105497978_105498616
transcript_62256.known	chr14	+	1311	5	FSM	ENSG00000213145.10	ENST00000330233.11	1311	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	3.49106001094224	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTACATGCGCGTG	105486297	False	NA	26	True	AGTAAA	-20	NA	105486316	105488791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_105487300_105488165_105488261_105488330_105488389_105488470_105488517_105488662
transcript_62257.known	chr14	+	1548	2	FSM	ENSG00000184986.11	ENST00000392519.7	1548	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGCACTGCTTTGCCTGT	105526528	True	NA	23	True	TTTAAA	-28	NA	105526582	105530198	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_105526654_105528721
transcript_62258.known	chr14	+	366	2	FSM	ENSG00000184986.11	ENST00000552019.1	366	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGCTGGCTGAGCGCCGCA	105527050	False	NA	NA	False	NA	NA	NA	105527104	105528753	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr14_+_105527439_105528721
transcript_62283.nnic	chr15	+	551	5	NNC	ENSG00000276550.5	novel	5181	32	NA	NA	-731	-41065	at_least_one_novel_splicesite	FALSE	canonical	3	78	junction_3	74.1552425658496	22	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGAAGAAGAAACTCCTGC	NA	False	NA	NA	False	AAGAAA	-25	NA	22494838	22523402	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_+_22494956_22495569_22495673_22516875_22516991_22523041_22523202_22523346
transcript_62290.known	chr15	+	2799	6	FSM	ENSG00000170113.16	ENST00000559448.5	2799	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	63.6220087705505	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAAATGTGTTTTTGT	22785622	True	NA	NA	False	ATTAAA	-13	NA	22786766	22826076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_22786835_22810748_22810797_22812162_22812254_22813632_22813715_22820312_22820474_22823727
transcript_62291.known	chr15	+	582	6	FSM	ENSG00000170113.16	ENST00000557930.1	582	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	56.9048328351819	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGAGAGCCCTCTGCCTG	22786792	False	NA	NA	False	NA	NA	NA	22786812	22823916	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_22786835_22810748_22810797_22812162_22812254_22814082_22814154_22820312_22820474_22823727
transcript_62294.known	chr15	+	6553	5	FSM	ENSG00000170113.16	ENST00000337435.9	6553	5	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_2	15.4656878282215	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTTGATTTTTTTTTT	22785499	True	NA	9	True	AATAAA	-21	NA	22786643	22829789	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_22786835_22810748_22810797_22812162_22812254_22820312_22820474_22823727
transcript_62296.known	chr15	+	4223	3	FSM	ENSG00000274253.6	ENST00000619879.6	4229	3	6	0	6	0	multi-exon	FALSE	canonical	3	8	junction_1	3	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCCCCCATCTGCTCCTC	22757571	True	NA	NA	False	NA	NA	NA	22757840	22768189	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_22757995_22758818_22758922_22764223
transcript_62298.known	chr15	-	6826	31	FSM	ENSG00000273749.5	ENST00000617928.5	6826	31	0	0	0	0	multi-exon	TRUE	canonical	3	320	junction_28	37.0822059753731	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTCATGTGCTGAGGTCAT	-22973099	True	NA	NA	False	AATAAA	-14	NA	22980368	22867051	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_22870193_22872824_22872973_22873490_22873730_22874549_22874645_22875198_22875272_22879912_22880044_22881845_22881937_22882867_22883012_22892889_22892978_22903705_22903906_22909193_22909314_22910519_22910629_22910736_22910814_22912178_22912276_22914725_22914883_22916476_22916631_22917787_22917936_22918691_22918859_22925981_22926108_22927905_22928029_22932222_22932341_22933801_22933894_22937103_22937209_22939191_22939321_22939410_22939508_22943172_22943355_22944557_22944660_22944861_22944940_22947002_22947093_22947168_22947292_22980286
transcript_62300.nic	chr15	-	4475	31	NIC	ENSG00000273749.5	novel	4515	32	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_30	74.0772944670333	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGTTCATTTATTTAC	-22973135	True	NA	-2	True	AATAAA	-14	NA	22980404	22869465	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_22870193_22872824_22872973_22873490_22873730_22874549_22874645_22875198_22875272_22879912_22880044_22881845_22881937_22882867_22883012_22892889_22892978_22903705_22903906_22909193_22909314_22910519_22910629_22910736_22910814_22912178_22912276_22914725_22914883_22916476_22916631_22917787_22917936_22918691_22918859_22925981_22926108_22927905_22928029_22932222_22932341_22933801_22933894_22937103_22937209_22939191_22939321_22939410_22939508_22943172_22943355_22944557_22944660_22944861_22944940_22947002_22947093_22947168_22947319_22980286
transcript_62338.known	chr15	+	3227	8	FSM	ENSG00000140157.16	ENST00000337451.8	3227	8	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_2	295.130825366705	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTAGCACTTGAGATTG	22827144	True	NA	9	True	AATAAA	-21	NA	22838665	22868384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_22838922_22839654_22839791_22845145_22845268_22851638_22851871_22853211_22853269_22858539_22858631_22860628_22860790_22866212
transcript_62353.known	chr15	+	4169	7	FSM	ENSG00000140157.16	ENST00000398014.7	4169	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	333.139610373789	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGGTGACCTCCATCCC	22827123	True	NA	NA	False	NA	NA	NA	22838644	22869362	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_22838922_22839654_22839791_22845145_22845268_22851638_22851871_22858539_22858631_22860628_22860790_22866212
transcript_62354.known	chr15	+	2099	7	FSM	ENSG00000140157.16	ENST00000674477.1	2099	7	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_2	297.1146897898	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCAGAAATCACCCCAAGG	22827164	True	NA	142	True	AATGAA	-30	NA	22838685	22867398	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_22838922_22839654_22839791_22851638_22851871_22853211_22853269_22858539_22858631_22860628_22860790_22866212
transcript_62367.nic	chr15	+	2481	7	NIC	ENSG00000140157.16	novel	2099	7	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	376.799091765832	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAGTTCTTATTCTAAAA	22827126	True	NA	8	True	AATAAA	-9	NA	22838647	22867716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_22838948_22839654_22839791_22851638_22851871_22853211_22853269_22858539_22858631_22860628_22860790_22866212
transcript_62369.known	chr15	+	4076	7	FSM	ENSG00000140157.16	ENST00000674173.1	4076	7	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	326.930888041426	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGGTGACCTCCATCCC	22827137	True	NA	NA	False	NA	NA	NA	22838658	22869362	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_22838922_22845145_22845268_22851638_22851871_22853211_22853269_22858539_22858631_22860628_22860790_22866212
transcript_62373.known	chr15	+	4082	7	FSM	ENSG00000140157.16	ENST00000674289.1	4082	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	352.401601711583	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGGTGACCTCCATCCC	22827157	True	NA	NA	False	NA	NA	NA	22838678	22869362	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_22838948_22845145_22845268_22851638_22851871_22853211_22853269_22858539_22858631_22860628_22860790_22866212
transcript_62377.known	chr15	+	2280	6	FSM	ENSG00000140157.16	ENST00000398013.7	2280	6	0	0	0	0	multi-exon	FALSE	canonical	3	433	junction_1	173.757762416532	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAGTTCTTATTCTAAAA	22827165	True	NA	8	True	AATAAA	-9	NA	22838686	22867716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_22838922_22851638_22851871_22853211_22853269_22858539_22858631_22860628_22860790_22866212
transcript_62386.nnic	chr15	+	2345	6	NIC	ENSG00000140157.16	novel	2280	6	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	346.029131721594	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAGTTCTTATTCTAAAA	22827126	True	NA	8	True	AATAAA	-9	NA	22838647	22867716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_22838948_22851638_22851871_22853211_22853269_22858539_22858631_22860628_22860790_22866212
transcript_62388.known	chr15	+	1691	6	FSM	ENSG00000140157.16	ENST00000674330.1	1691	6	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_1	336.056780916559	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTATGAAGTGAATTTGA	22827167	True	NA	10	True	ATTAAA	-14	NA	22838688	22866876	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_22839175_22851638_22851871_22853211_22853269_22858539_22858631_22860628_22860790_22866212
transcript_62389.known	chr15	+	1412	5	FSM	ENSG00000140157.16	ENST00000539711.2	1412	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	359.284966983034	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACATTGTCCTCAAAT	22827176	True	NA	50	True	NA	NA	NA	22838697	22866916	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_22838922_22851638_22851871_22858539_22858631_22860628_22860790_22866212
transcript_62397.known	chr15	-	3744	23	FSM	ENSG00000275835.5	ENST00000615383.5	3744	23	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	13.2861855802456	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTATCCTTTTGCTGC	NA	False	NA	0	True	AATAAA	-19	NA	23039569	22999176	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_22999867_23000568_23000670_23003064_23003154_23004101_23004228_23005431_23005611_23006051_23006173_23006267_23006353_23008698_23008882_23009944_23010134_23011132_23011332_23017772_23018042_23019218_23019335_23021958_23022162_23023946_23024194_23024736_23024831_23026115_23026206_23027191_23027307_23030884_23031021_23031949_23032030_23032727_23032825_23036896_23037006_23037098_23037153_23039397
transcript_62403.known	chr15	-	3342	22	FSM	ENSG00000275835.5	ENST00000620435.4	3342	22	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_4	12.4492621060096	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCGTGTAGTTTTTGTAA	NA	False	NA	NA	False	AATAAA	-34	NA	23039572	23000283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_23000670_23003064_23003154_23004101_23004228_23005431_23005611_23006051_23006173_23006267_23006353_23008698_23008882_23009944_23010134_23011132_23011332_23017772_23018042_23019218_23019335_23021958_23022162_23023946_23024194_23024736_23024831_23026115_23026206_23027191_23027307_23030884_23031021_23031949_23032030_23032727_23032825_23036896_23037006_23037098_23037153_23039397
transcript_62404.nic	chr15	-	2602	18	ISM	ENSG00000275835.5	ENST00000620435.4	3342	22	-68	5796	-68	-281	5prime_fragment	FALSE	canonical	3	81	junction_9	11.6170141301902	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTGGATGTTTTACT	NA	False	NA	-17	True	AATAAA	-11	NA	23039640	23006079	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_23006173_23006267_23006353_23008698_23008882_23009944_23010134_23011132_23011332_23017772_23018042_23019218_23019335_23021958_23022162_23023946_23024194_23024736_23024831_23026115_23026206_23027191_23027307_23030884_23031021_23031949_23032030_23032727_23032825_23036896_23037006_23037098_23037153_23039397
transcript_62406.nic	chr15	-	1605	13	ISM	ENSG00000275835.5	ENST00000620435.4	3342	22	3	17666	0	-7990	5prime_fragment	FALSE	canonical	3	81	junction_4	9.39377749127344	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGATAACGCTAGTGCG	NA	False	NA	NA	False	AAGAAA	-4	NA	23039569	23017949	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_23018042_23019218_23019335_23021958_23022162_23023946_23024194_23024736_23024831_23026115_23026206_23027191_23027307_23030884_23031021_23031949_23032030_23032727_23032825_23036896_23037006_23037098_23037153_23039397
transcript_6241.known	chr1	-	972	5	FSM	ENSG00000160055.20	ENST00000487174.1	972	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	20.8686367547092	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAACAGCTACCTCATGGA	-32221825	True	NA	NA	False	NA	NA	NA	32222319	32216729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32216948_32217258_32217352_32217436_32217578_32221130_32221198_32221866
transcript_6242.known	chr1	-	1107	5	FSM	ENSG00000160055.20	ENST00000309777.11	1107	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	11.1887220003001	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGGTTAGTAAGTATTC	-32221859	True	NA	-3	True	AATAAA	-16	NA	32222353	32216199	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32216948_32217258_32217352_32221130_32221198_32221866_32222019_32222306
transcript_62425.known	chr15	-	4319	1	FSM	ENSG00000254585.5	ENST00000650528.1	4319	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAGTGTTTGTCTTTATT	-23647071	True	NA	-3	True	AGTAAA	-39	NA	23647867	23643548	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_23643500_23647900
transcript_62426.known	chr15	-	1906	1	FSM	ENSG00000182636.8	ENST00000649030.2	1906	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTCCCTTAAGTTTCT	-23682152	True	NA	NA	False	AATAAA	-13	NA	23687305	23685399	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_23685400_23687300
transcript_62447.known	chr15	+	1605	12	FSM	ENSG00000128739.23	ENST00000400097.5	1605	12	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	3407.22137828776	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTACTGTTGTATATATTT	24856156	True	NA	21	True	AATAAA	-23	NA	24856550	24978582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_24856717_24886515_24886590_24920010_24920125_24962113_24962210_24967931_24968083_24974310_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_62452.known	chr15	+	1763	12	FSM	ENSG00000128739.23	ENST00000554227.6	1763	12	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_6	3480.33846553906	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAATAATAGCTAATAATAA	24828736	True	NA	-22	True	NA	NA	NA	24954947	24978539	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_24955063_24962113_24962210_24967028_24967153_24967931_24968083_24974310_24974457_24974641_24974958_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_62464.nic	chr15	+	1550	11	NIC	ENSG00000128739.23	novel	1763	12	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	3	579	junction_3	2777.47109615924	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGAGGTACTGTTGTATA	24828671	True	NA	16	True	AATAAA	-18	NA	24954882	24978577	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_24955063_24962113_24962210_24967028_24967153_24967931_24968083_24974310_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_62488.known	chr15	+	1298	10	FSM	ENSG00000128739.23	ENST00000577565.1	1298	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	2420.75812020598	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTAATAATAAATGCATAGA	24828793	True	NA	-13	True	NA	NA	NA	24955004	24978548	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_24955063_24962113_24962210_24967931_24968083_24974287_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_62491.known	chr15	+	1468	10	FSM	ENSG00000128739.23	ENST00000390687.9	1468	10	0	0	0	0	multi-exon	FALSE	canonical	3	7282	junction_5	263.817464018187	4367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCACTTTGTGCATTGAC	24828775	True	NA	8	True	GATAAA	-20	NA	24954986	24978723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_24955063_24962113_24962210_24967931_24968083_24974310_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_62494.known	chr15	+	1304	10	FSM	ENSG00000128739.23	ENST00000346403.10	1304	10	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_3	2321.71193755549	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACTGTTGTATATATTTT	24828723	True	NA	22	True	AATAAA	-24	NA	24954934	24978583	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_24955063_24962113_24962210_24967931_24968083_24974386_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_62502.nnic	chr15	+	1400	10	NNC	ENSG00000128739.23	novel	1468	10	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	canonical	3	276	junction_1	2339.91820580903	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGAGGTACTGTTGTATA	24828671	True	NA	16	True	AATAAA	-18	NA	24954882	24978577	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_+_24955037_24962113_24962210_24967931_24968083_24974310_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_6252.known	chr1	-	1169	4	FSM	ENSG00000220785.8	ENST00000403496.7	1172	4	0	3	0	0	multi-exon	FALSE	canonical	3	23	junction_2	9.93310961716756	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTTGCTGGGGTGTCAG	-32240240	False	NA	-3	True	AATAAA	-18	NA	32240422	32231659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32231970_32232041_32232185_32234951_32235114_32239868
transcript_62549.known	chr15	+	6701	19	FSM	ENSG00000224078.15	ENST00000668163.1	6701	19	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_12	439.769117314086	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGTAACACATTCATAT	25089061	False	NA	1	True	AATAAA	-9	NA	25089073	25122467	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_25089867_25091589_25091720_25093833_25093975_25095626_25095829_25097320_25097440_25098716_25098829_25099144_25099279_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109100_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
transcript_62554.known	chr15	+	7549	16	FSM	ENSG00000224078.15	ENST00000654058.1	7549	16	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	512.178718808191	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGTAACACATTCATAT	25096192	False	NA	1	True	AATAAA	-9	NA	25096334	25122467	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_25097440_25098716_25098829_25099144_25100291_25100778_25100891_25103858_25103971_25106163_25106295_25107471_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
transcript_62561.known	chr15	+	17832	11	FSM	ENSG00000224078.15	ENST00000551631.7	17832	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	365.420429095036	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGCGAGTTCTGGTCATT	24979543	False	NA	35	True	AATAAA	-31	NA	24979556	25036490	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_24979643_24979946_24980085_24981774_24982438_24998365_24998487_24998969_24999079_25000244_25000375_25001357_25001714_25002724_25002889_25019026_25019149_25019827_25019870_25020589
transcript_6257.known	chr1	+	1482	10	FSM	ENSG00000084623.12	ENST00000471486.6	1482	10	0	0	0	0	multi-exon	FALSE	canonical	3	1560	junction_6	107.150983818784	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	32207706	True	NA	31	True	AATAAA	-32	NA	32222436	32231602	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_62581.nic	chr15	+	3433	5	NIC	ENSG00000224078.15	novel	17832	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_1	385.625709075523	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACTCCATCTCAAAAAAAAA	24981980	False	NA	NA	False	NA	NA	NA	24981993	25023250	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_24982438_25002724_25002889_25019026_25019149_25019827_25019870_25020589
transcript_62584.nnic	chr15	+	1701	4	NIC	ENSG00000224078.15	novel	17832	11	NA	NA	-8	849	combination_of_known_splicesites	FALSE	canonical	3	625	junction_1	140.117411084022	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATACGTGTACAGCCATTA	24981972	False	NA	2	True	ATTAAA	-13	NA	24981985	25021674	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_24982438_25019026_25019149_25019827_25019870_25020589
transcript_62585.nnic	chr15	+	3277	4	NIC	ENSG00000224078.15	novel	17832	11	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	625	junction_1	140.117411084022	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACTCCATCTCAAAAAAAAA	24981972	False	NA	NA	False	NA	NA	NA	24981985	25023250	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_24982438_25019026_25019149_25019827_25019870_25020589
transcript_62586.known	chr15	+	11177	3	FSM	ENSG00000224078.15	ENST00000557108.6	11177	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCTATGGATGTTTTTC	24978569	False	NA	7	True	ATTAAA	-21	NA	24978582	24991753	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_24979643_24979946_24980085_24981774
transcript_62587.known	chr15	+	2256	10	FSM	ENSG00000224078.15	ENST00000663996.1	2256	10	0	0	0	0	multi-exon	FALSE	canonical	3	1513	junction_8	132.608120340524	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGGGATTAAGTATGTG	25107399	False	NA	27	True	AATAAA	-17	NA	25107469	25119890	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_25107589_25107909_25108039_25108997_25109104_25109197_25109404_25109554_25109716_25111764_25111895_25115298_25115657_25117409_25117516_25118267_25118383_25119064
transcript_62592.known	chr15	+	331	4	FSM	ENSG00000273173.5	ENST00000338327.4	331	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	3647.5855941522	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATGTAGATTTATTTAG	24828802	True	NA	22	True	AATAAA	-23	NA	24955013	24968829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_24955063_24962113_24962210_24967931_24968083_24968794
transcript_62594.known	chr15	+	650	3	FSM	ENSG00000273173.5	ENST00000577949.5	650	3	0	0	0	0	multi-exon	FALSE	canonical	3	7503	junction_1	270.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTTTTCTGCCAGTAG	24828774	True	NA	NA	False	NA	NA	NA	24954985	24968408	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_24955063_24962113_24962210_24967931
transcript_62597.nic	chr15	+	1695	2	ISM	ENSG00000273173.5	ENST00000577949.5	650	3	-96	4773	-96	-4773	5prime_fragment	FALSE	canonical	3	7503	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGTGTATGAATACTAAT	24828678	True	NA	NA	False	AAAAAG	-5	NA	24954889	24963635	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_24955063_24962113
transcript_62598.nic	chr15	+	1942	2	ISM	ENSG00000273173.5	ENST00000577949.5	650	3	-96	4526	-96	-4526	5prime_fragment	FALSE	canonical	3	7503	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCAGGCGTGGTGTTGT	24828678	True	NA	NA	False	AATAAA	-1	NA	24954889	24963882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_24955063_24962113
transcript_62599.nnic	chr15	+	1636	2	NNC	ENSG00000273173.5	novel	650	3	NA	NA	-63	-4773	at_least_one_novel_splicesite	FALSE	canonical	3	276	junction_1	0	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGTGTATGAATACTAAT	24828711	True	NA	NA	False	AAAAAG	-5	NA	24954922	24963635	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_+_24955037_24962113
transcript_6260.known	chr1	+	2166	13	FSM	ENSG00000182866.17	ENST00000333070.4	2166	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	56.8438406709313	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACATCTCTTTGCTGTCCA	32270764	True	NA	12	True	AATAAA	-19	NA	32274131	32286162	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32274227_32274324_32274435_32274736_32274819_32274992_32275084_32275320_32275420_32275568_32275673_32275913_32276064_32276336_32276490_32276606_32276787_32279580_32279748_32279840_32279995_32280078_32280211_32285513
transcript_62600.known	chr15	+	1236	1	FSM	ENSG00000261069.3	ENST00000567527.1	1236	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACATTACTCCAACAGGGG	25087650	False	NA	NA	False	NA	NA	NA	25087660	25088896	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_25087700_25088900
transcript_62606.known	chr15	-	2986	15	FSM	ENSG00000114062.22	ENST00000428984.6	2986	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	179.257140580172	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAGGAAAAAAAAAGAAAA	-25438504	False	NA	NA	False	AATAAA	-11	NA	25438524	25339105	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_25339258_25340084_25340229_25354352_25354427_25354527_25354684_25355891_25356057_25356690_25356897_25360382_25360528_25370565_25371813_25375464_25375764_25405460_25405503_25407066_25407138_25408619_25408685_25409087_25409208_25411907_25411972_25438488
transcript_6261.known	chr1	+	2099	13	FSM	ENSG00000182866.17	ENST00000619559.4	2099	13	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_5	15.5802135914613	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTCTTTGCTGTCCACT	32270743	True	NA	14	True	AATAAA	-21	NA	32274110	32286164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32274227_32274324_32274435_32274736_32274819_32274992_32275084_32275320_32275420_32275568_32275673_32275913_32276064_32276336_32276490_32276606_32276787_32279670_32279748_32279840_32279995_32280078_32280211_32285513
transcript_62610.known	chr15	-	3176	15	FSM	ENSG00000114062.22	ENST00000566215.5	3176	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_11	178.874842232421	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAGGAAAAAAAAAGAAAA	-25438521	False	67	NA	False	AATAAA	-11	NA	25438541	25339105	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_25339258_25340084_25340229_25354352_25354427_25354527_25354684_25355891_25356057_25356690_25356897_25360382_25360528_25370565_25371813_25375464_25375764_25405460_25405503_25407066_25407263_25408571_25408685_25409087_25409208_25411907_25411972_25438488
transcript_62616.known	chr15	-	8742	14	FSM	ENSG00000114062.22	ENST00000638011.1	8742	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_10	179.750912466514	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTGCTAGTATTTTG	-25438905	False	NA	0	True	CATAAA	-21	NA	25438925	25333727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_25339258_25340084_25340229_25354352_25354427_25354527_25354684_25355891_25356057_25356690_25356897_25360382_25360528_25370565_25371813_25375464_25375764_25393745_25393859_25405460_25405503_25409087_25409208_25411907_25411972_25438488
transcript_62619.known	chr15	-	5075	14	FSM	ENSG00000114062.22	ENST00000630424.2	5075	14	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_11	163.655179421488	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTCTTCAGTTCTCA	-25438674	False	3275	-23	True	AATAAA	-13	NA	25438694	25337246	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_25339258_25340084_25340229_25354352_25354427_25354527_25354684_25355891_25356057_25356690_25356897_25360382_25360528_25370565_25371813_25375464_25375764_25405460_25405503_25407066_25407263_25409087_25409208_25411907_25411972_25438488
transcript_62620.known	chr15	-	5274	14	FSM	ENSG00000114062.22	ENST00000650110.1	5274	14	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_10	168.983210538168	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTCTTCAGTTCTCA	-25435749	True	NA	-23	True	AATAAA	-13	NA	25439024	25337246	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_25339258_25340084_25340229_25354352_25354427_25354527_25354684_25355891_25356057_25356690_25356897_25360382_25360528_25370565_25371813_25375464_25375764_25405460_25405503_25408619_25408685_25409087_25409208_25411907_25411972_25438488
transcript_62622.known	chr15	-	8725	14	FSM	ENSG00000114062.22	ENST00000637886.1	8725	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_13	176.555504456378	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTGCTAGTATTTTG	-25435710	True	NA	0	True	CATAAA	-21	NA	25438985	25333727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_25339258_25340084_25340229_25354352_25354427_25354527_25354684_25355891_25356057_25356690_25356897_25360382_25360528_25370565_25371813_25375464_25375764_25405460_25405503_25409087_25409208_25411907_25411972_25421925_25421962_25438488
transcript_62623.known	chr15	-	8728	13	FSM	ENSG00000114062.22	ENST00000648336.2	8728	13	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_10	123.619347415991	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTGCTAGTATTTTG	-25435749	True	NA	0	True	CATAAA	-21	NA	25439024	25333727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_25339258_25340084_25340229_25354352_25354427_25354527_25354684_25355891_25356057_25356690_25356897_25360382_25360528_25370565_25371813_25375464_25375764_25405460_25405503_25409087_25409208_25411907_25411972_25438488
transcript_62633.known	chr15	-	5025	11	FSM	ENSG00000114062.22	ENST00000649550.1	5025	11	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_10	88.5146315588558	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTCTTCAGTTCTCA	-25435749	True	NA	-23	True	AATAAA	-13	NA	25439024	25337246	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_25339258_25340084_25340229_25354352_25354427_25354527_25354684_25355891_25356057_25356690_25356897_25360382_25360528_25370565_25371813_25375464_25375764_25405460_25405503_25438488
transcript_62637.known	chr15	-	2598	10	FSM	ENSG00000114062.22	ENST00000675177.1	2598	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	147.051347377139	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAACAAAACAAAATAA	-25438509	False	NA	NA	False	NA	NA	NA	25438529	25339136	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_25339258_25340084_25340229_25354352_25354427_25354527_25354684_25355891_25356057_25356690_25356897_25360382_25360528_25370565_25371813_25375464_25375764_25438488
transcript_62642.known	chr15	-	4968	9	FSM	ENSG00000114062.22	ENST00000625778.3	4968	9	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_8	85.7394308355263	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTAATACATTTCAACTA	-25435776	True	NA	NA	False	AATAAA	-12	NA	25439051	25352281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_25354427_25354527_25354684_25355891_25356057_25356690_25356897_25360382_25360528_25370565_25371813_25375464_25375764_25405460_25405503_25438488
transcript_6265.nic	chr1	+	2183	13	NIC	ENSG00000182866.17	novel	2099	13	NA	NA	-63	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	57.0233870150368	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTCTTTGCTGTCCACT	32270680	True	NA	14	True	AATAAA	-21	NA	32274047	32286164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_32274227_32274303_32274435_32274736_32274819_32274992_32275084_32275320_32275420_32275568_32275673_32275913_32276064_32276336_32276490_32276606_32276787_32279670_32279748_32279840_32279995_32280078_32280211_32285513
transcript_62656.known	chr15	-	3371	6	FSM	ENSG00000114062.22	ENST00000675000.1	3371	6	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_3	94.9623083122983	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTAAATTCGAGAATTCA	-25435724	True	NA	NA	False	TTTAAA	-43	NA	25438999	25369477	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_25371813_25375464_25375764_25405460_25405503_25409087_25409208_25411907_25411972_25438488
transcript_62663.nic	chr15	-	1802	4	ISM	ENSG00000114062.22	ENST00000625778.3	4968	9	-5	18638	-5	563	5prime_fragment	FALSE	canonical	3	210	junction_3	81.6714284326056	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCTCGAGTGGACCCCCT	-25435781	True	NA	NA	False	AAGAAA	-15	NA	25439056	25370919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_25371813_25375464_25375764_25405460_25405503_25438488
transcript_62668.known	chr15	-	1759	8	FSM	ENSG00000206190.13	ENST00000673716.1	1759	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	7.07106781186548	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCATGAATGGTCTCCAT	-25863221	True	NA	-5	True	ATTAAA	-20	NA	25863343	25719149	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_25719299_25721656_25721910_25723890_25724022_25725950_25726083_25727159_25727267_25736055_25736142_25781018_25781224_25862647
transcript_62677.known	chr15	-	5767	9	FSM	ENSG00000166206.15	ENST00000311550.10	5767	9	0	0	0	0	multi-exon	FALSE	canonical	3	874	junction_1	75.8649087193809	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAATGTGAAGACTGATT	-26773020	False	2952	-10	True	ATTAAA	-15	NA	26773066	26543551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_26548135_26560931_26561177_26567580_26567734_26580318_26580457_26583331_26583415_26621313_26621535_26772401_26772470_26772680_26772773_26772882
transcript_62678.known	chr15	-	4494	9	FSM	ENSG00000166206.15	ENST00000299267.8	4494	9	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_8	277.973441851915	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTAGTCCTGTCTTTCCA	-26770836	True	NA	-19	True	AATAAA	-13	NA	26773788	26544784	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_26548135_26560931_26561177_26567580_26567734_26580318_26580457_26583331_26583415_26621313_26621535_26772401_26772470_26772680_26772773_26773644
transcript_62706.known	chr15	-	1900	7	FSM	ENSG00000166206.15	ENST00000400188.7	1900	7	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_6	343.437241557885	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTGGCTGGGGTGAGCC	-26628791	True	NA	NA	False	NA	NA	NA	26629090	26547188	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_26548135_26560931_26561177_26567580_26567734_26580318_26580457_26583331_26583415_26621313_26621535_26628976
transcript_62720.known	chr15	-	406	4	FSM	ENSG00000166206.15	ENST00000554722.1	406	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	467.786988560677	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCGCTGCTTCAGAGAGC	-26770799	True	NA	NA	False	NA	NA	NA	26773751	26771818	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_26771958_26772401_26772470_26772680_26772773_26773644
transcript_62722.known	chr15	-	3860	1	FSM	ENSG00000166206.15	ENST00000621499.1	3860	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTCATTACAATATTT	-26615696	False	NA	0	True	ATTAAA	-22	NA	26615717	26611857	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_26611900_26615700
transcript_62726.known	chr15	+	2553	11	FSM	ENSG00000186297.12	ENST00000335625.10	2553	11	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	48.2684161745546	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATAGGATTCTTTTTTTT	26864983	True	NA	18	True	AATAAA	-21	NA	26867061	26949208	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_26867112_26868728_26868794_26869174_26869335_26880845_26880968_26883165_26883234_26883336_26883558_26914802_26914886_26937184_26937329_26939924_26940078_26943214_26943427_26947933
transcript_62729.nic	chr15	+	2827	11	NIC	ENSG00000186297.12	novel	2761	11	NA	NA	22	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_1	46.9754191040378	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATAGGATTCTTTTTTT	26865015	True	NA	17	True	AATAAA	-20	NA	26867093	26949207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_26867419_26868728_26868794_26869174_26869335_26880845_26880968_26883165_26883234_26883336_26883558_26914802_26914886_26937184_26937329_26939924_26940078_26943214_26943427_26947933
transcript_62731.known	chr15	+	2761	11	FSM	ENSG00000186297.12	ENST00000400081.7	2761	11	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	43.1768456467121	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATAGGATTCTTTTTTT	26865047	True	NA	17	True	AATAAA	-20	NA	26867125	26949207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_26867385_26868728_26868794_26869174_26869335_26880845_26880968_26883165_26883234_26883336_26883558_26914802_26914886_26937184_26937329_26939924_26940078_26943214_26943427_26947933
transcript_62732.nnic	chr15	+	2609	11	NNC	ENSG00000186297.12	novel	2761	11	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_9	71.9658947001981	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACATATAGGATTCTTTTT	26865035	True	NA	15	True	AATAAA	-18	NA	26867113	26949205	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_+_26867385_26868728_26868794_26869174_26869335_26880845_26880968_26883165_26883234_26883336_26883558_26914802_26914886_26937184_26937329_26939924_26940078_26943456_26943507_26947933
transcript_62736.known	chr15	+	2183	10	FSM	ENSG00000186297.12	ENST00000355395.9	2183	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	58.5139004272478	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGAAAGTACTGCATGATC	26866898	False	NA	NA	False	AATGAA	-32	NA	26866910	26948752	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_26867112_26869174_26869335_26880845_26880968_26883165_26883234_26883336_26883558_26914802_26914886_26937184_26937329_26939924_26940078_26943214_26943427_26947933
transcript_62742.nic	chr15	+	2670	9	NIC	ENSG00000186297.12	novel	2553	11	NA	NA	-192	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	61.3411311845486	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATAGGATTCTTTTTTT	26866686	False	NA	17	True	AATAAA	-20	NA	26866718	26949207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_26867112_26880845_26880968_26883165_26883234_26883336_26883558_26914802_26914886_26937184_26937329_26939924_26940078_26943214_26943427_26947933
transcript_62744.nnic	chr15	+	2582	9	NIC	ENSG00000186297.12	novel	2761	11	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	64.3834945851808	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATAGGATTCTTTTTTT	26865035	True	NA	17	True	AATAAA	-20	NA	26867113	26949207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_26867419_26880845_26880968_26883165_26883234_26883336_26883558_26914802_26914886_26937184_26937329_26939924_26940078_26943214_26943427_26947933
transcript_62745.nnic	chr15	+	2517	9	NIC	ENSG00000186297.12	novel	2761	11	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	2	16	junction_1	61.0384100382702	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATAGGATTCTTTTTTT	26865066	True	NA	17	True	AATAAA	-20	NA	26867144	26949207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_26867385_26880845_26880968_26883165_26883234_26883336_26883558_26914802_26914886_26937184_26937329_26939924_26940078_26943214_26943427_26947933
transcript_62763.known	chr15	-	3121	21	FSM	ENSG00000128731.18	ENST00000564734.5	3121	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	33.9621480474955	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAATTGATGAACAG	NA	False	NA	8	True	AAAAAG	-13	NA	28322149	28254487	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_28254519_28255871_28255997_28256088_28256318_28257060_28257262_28260776_28260971_28262917_28263170_28265617_28265732_28265816_28265975_28268464_28268617_28269247_28269437_28270694_28270869_28272214_28272387_28272893_28273005_28274290_28274448_28274904_28275006_28280067_28280288_28292887_28293023_28298516_28298630_28299401_28299517_28321361_28321465_28322074
transcript_62770.nic	chr15	-	3077	20	ISM	ENSG00000128731.18	ENST00000261609.13	15364	93	-39	143448	-39	0	5prime_fragment	FALSE	canonical	3	30	junction_15	31.4714838167635	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAATTGATGAACAG	NA	False	NA	8	True	AAAAAG	-13	NA	28322218	28254487	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_28254519_28255871_28255997_28256088_28256318_28257060_28257262_28260776_28260971_28262917_28263170_28265617_28265732_28265816_28265975_28268464_28268617_28269247_28269437_28270694_28270869_28272214_28272387_28272893_28273005_28274290_28274448_28274904_28275006_28280067_28280288_28292887_28293023_28299401_28299517_28321361_28321465_28322074
transcript_62790.nic	chr15	-	3047	19	ISM	ENSG00000128731.18	ENST00000261609.13	15364	93	-39	144831	-39	-1383	5prime_fragment	FALSE	canonical	3	30	junction_14	32.140557432919	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTTTGGAGGCACACG	NA	False	NA	NA	False	NA	NA	NA	28322218	28255870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_28255997_28256088_28256318_28257060_28257262_28260776_28260971_28262917_28263170_28265617_28265732_28265816_28265975_28268464_28268617_28269247_28269437_28270694_28270869_28272214_28272387_28272893_28273005_28274290_28274448_28274904_28275006_28280067_28280288_28292887_28293023_28299401_28299517_28321361_28321465_28322074
transcript_62793.nnic	chr15	-	2819	18	NIC	ENSG00000128731.18	novel	3121	21	NA	NA	-39	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_13	33.9931806717161	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAATTGATGAACAG	NA	False	NA	8	True	AAAAAG	-13	NA	28322218	28254487	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_28254519_28255871_28255997_28256088_28256318_28257060_28257262_28260776_28260971_28262917_28263170_28265617_28265732_28265816_28265975_28268464_28268617_28269247_28269437_28270694_28270869_28272214_28272387_28272893_28273005_28280067_28280288_28292887_28293023_28299401_28299517_28321361_28321465_28322074
transcript_628.known	chr1	-	1798	15	FSM	ENSG00000127054.22	ENST00000419704.5	1798	15	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_13	137.881511539763	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGACTACTTGGTACTCT	-1318730	True	NA	-23	True	AGTAAA	-9	NA	1324653	1311605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1311925_1312017_1312148_1312225_1312369_1312439_1312502_1312592_1312701_1312786_1312950_1313034_1313125_1313508_1313593_1313731_1313922_1314300_1314366_1314823_1314963_1315403_1315439_1315519_1315619_1320995_1321094_1324580
transcript_62805.nnic	chr15	-	2789	17	NIC	ENSG00000128731.18	novel	3121	21	NA	NA	-39	-1383	combination_of_known_splicesites	FALSE	canonical	3	8	junction_12	34.8083480468407	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTTTGGAGGCACACG	NA	False	NA	NA	False	NA	NA	NA	28322218	28255870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_28255997_28256088_28256318_28257060_28257262_28260776_28260971_28262917_28263170_28265617_28265732_28265816_28265975_28268464_28268617_28269247_28269437_28270694_28270869_28272214_28272387_28272893_28273005_28280067_28280288_28292887_28293023_28299401_28299517_28321361_28321465_28322074
transcript_62813.nic	chr15	-	421	4	ISM	ENSG00000128731.18	ENST00000261609.13	15364	93	-39	181924	-39	-12930	5prime_fragment	FALSE	canonical	3	82	junction_1	29.4882274061286	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGAAGAAGAAACTCCTGC	NA	False	NA	15	True	AAGAAA	-28	NA	28322218	28292963	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_28293023_28299401_28299517_28321361_28321465_28322074
transcript_62815.nic	chr15	-	362	3	ISM	ENSG00000128731.18	ENST00000564734.5	3121	21	-69	44914	-39	-19368	5prime_fragment	FALSE	canonical	3	129	junction_1	12	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGGCCTTTAACTAGTG	NA	False	NA	NA	False	NA	NA	NA	28322218	28299401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_28299517_28321361_28321465_28322074
transcript_62816.known	chr15	-	491	3	FSM	ENSG00000128731.18	ENST00000563945.1	491	3	0	0	0	0	multi-exon	TRUE	canonical	3	73	junction_1	40	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGGATGATGGGAT	NA	False	NA	NA	False	NA	NA	NA	28322119	28320121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_28320465_28321361_28321465_28322074
transcript_62819.known	chr15	-	15364	93	FSM	ENSG00000128731.18	ENST00000261609.13	15364	93	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_88	51.7251294081256	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAGGCTGAGCTTTCTTA	NA	False	NA	NA	False	AATAAA	-16	NA	28322179	28111039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_28112036_28113070_28113284_28113572_28113679_28114611_28114803_28115428_28115542_28116664_28116860_28117012_28117155_28121345_28121430_28124036_28124235_28125005_28125194_28130162_28130303_28130502_28130595_28132099_28132262_28132652_28132831_28135477_28135693_28141431_28141631_28141730_28141847_28142237_28142394_28142826_28142953_28143872_28143992_28144076_28144236_28144672_28144805_28146236_28146345_28152676_28152831_28163093_28163286_28167686_28167828_28168406_28168591_28169483_28169656_28174394_28174621_28175511_28175657_28176427_28176600_28176686_28176769_28176949_28177128_28177418_28177510_28178886_28179031_28179141_28179224_28182400_28182513_28186576_28186753_28190964_28191057_28191138_28191245_28191960_28192152_28196214_28196355_28196460_28196570_28198377_28198504_28198600_28198770_28201455_28201555_28202112_28202250_28202346_28202615_28206239_28206383_28211001_28211146_28212444_28212584_28213741_28213973_28214075_28214273_28214654_28214803_28215620_28215803_28218488_28218672_28220451_28220645_28222027_28222216_28228217_28228410_28229194_28229347_28229459_28229597_28229673_28229848_28230366_28230501_28233145_28233342_28233433_28233562_28233663_28233797_28234069_28234285_28236962_28237114_28238113_28238218_28238601_28238773_28245880_28246067_28246741_28246898_28248551_28248737_28254339_28254519_28255871_28255997_28256088_28256318_28257060_28257262_28260776_28260971_28262917_28263170_28265617_28265732_28265816_28265975_28268464_28268617_28269247_28269437_28270694_28270869_28272214_28272387_28272893_28273005_28274290_28274448_28274904_28275006_28280067_28280288_28292887_28293023_28299401_28299517_28321361_28321465_28322074
transcript_6282.known	chr1	+	2091	13	FSM	ENSG00000182866.17	ENST00000336890.10	2091	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	57.0233870150368	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCTTTGCTGTCCACTC	32251212	False	NA	15	True	AATAAA	-22	NA	32251264	32286165	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32251372_32274324_32274435_32274736_32274819_32274992_32275084_32275320_32275420_32275568_32275673_32275913_32276064_32276336_32276490_32276606_32276787_32279670_32279748_32279840_32279995_32280078_32280211_32285513
transcript_62820.known	chr15	+	409	1	FSM	ENSG00000256338.2	ENST00000544920.2	409	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATTATCT	NA	False	NA	6	True	AATAAA	-19	NA	28315650	28316059	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_28315600_28316100
transcript_62829.known	chr15	+	480	3	FSM	ENSG00000261377.6	ENST00000563144.2	581	3	96	5	49	-5	multi-exon	FALSE	canonical	3	47	junction_2	0.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTTTATGTGTACAGTT	28831779	True	NA	39	True	AATATA	-26	NA	28832379	28838983	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_28832461_28833275_28833379_28838687
transcript_62839.known	chr15	+	3941	15	FSM	ENSG00000034053.15	ENST00000683413.1	3941	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	33.1601709702394	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTGTGTGACTGGTCT	28885421	True	NA	8	True	AATAAA	-20	NA	28885973	29118315	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_28886279_28921639_28921750_28995752_28995807_29053844_29054836_29074920_29075002_29076054_29076092_29093074_29093221_29094277_29094314_29098489_29098577_29101598_29101785_29105378_29105559_29106606_29106820_29108269_29108390_29113875_29114017_29117061
transcript_62840.known	chr15	+	3349	15	FSM	ENSG00000034053.15	ENST00000558330.5	3349	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	32.5501967140361	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCATATTTATTTAGATGC	28885469	True	NA	32	True	AATAAA	-24	NA	28886021	29117717	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_28886279_28895519_28895610_28921639_28921750_28995752_28995807_29053844_29054836_29074920_29075002_29076054_29076092_29093074_29093221_29098489_29098577_29101598_29101785_29105378_29105559_29106606_29106820_29108269_29108390_29113875_29114017_29117061
transcript_62843.nic	chr15	+	3264	14	NIC	ENSG00000034053.15	novel	3349	15	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	21.2511050878683	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCATATTTATTTAGATGC	28885433	True	NA	32	True	AATAAA	-24	NA	28885985	29117717	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_28886279_28921639_28921719_28995752_28995807_29053844_29054836_29074920_29075002_29076054_29076092_29093074_29093221_29098489_29098577_29101598_29101785_29105378_29105559_29106606_29106820_29108269_29108390_29113875_29114017_29117061
transcript_62845.nic	chr15	+	3354	14	NIC	ENSG00000034053.15	novel	3349	15	NA	NA	-47	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_2	15.4579023661728	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCATATTTATTTAGATGC	28885914	True	NA	32	True	AATAAA	-24	NA	28885926	29117717	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_28886279_28921639_28921750_28995752_28995807_29053844_29054836_29074920_29075002_29076054_29076092_29093074_29093221_29098489_29098577_29101598_29101785_29105378_29105559_29106606_29106820_29108269_29108390_29113875_29114017_29117061
transcript_62846.nic	chr15	+	3949	14	NIC	ENSG00000034053.15	novel	3941	15	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_2	15.4579023661728	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTGTGTGACTGGTCT	28885917	False	NA	8	True	AATAAA	-20	NA	28885929	29118315	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_28886279_28921639_28921750_28995752_28995807_29053844_29054836_29074920_29075002_29076054_29076092_29093074_29093221_29098489_29098577_29101598_29101785_29105378_29105559_29106606_29106820_29108269_29108390_29113875_29114017_29117061
transcript_62853.known	chr15	+	2555	12	FSM	ENSG00000034053.15	ENST00000559814.5	2555	12	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	16.7790700005288	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCAGGCTCCCTTGTCCC	28885975	True	NA	NA	False	NA	NA	NA	28886159	29108620	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_28886279_28921639_28921750_28995752_28995807_29053844_29054836_29074920_29075002_29076054_29076092_29093074_29093221_29098489_29098577_29101598_29101785_29105378_29105559_29106606_29106820_29108269
transcript_62869.known	chr15	+	2530	2	FSM	ENSG00000256802.3	ENST00000536835.3	2588	2	58	0	2	0	multi-exon	FALSE	canonical	3	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAAAGTGAGGCCGGGCA	NA	False	NA	NA	False	AAGAAA	-15	NA	29674989	29679168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_29675527_29677175
transcript_6287.known	chr1	+	2118	14	FSM	ENSG00000116478.12	ENST00000373548.8	2118	14	0	0	0	0	multi-exon	TRUE	canonical	3	1040	junction_6	56.1193782519427	1031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCTGAGCTTGTTTCCT	32282665	True	NA	16	True	AATAAA	-17	NA	32292082	32333626	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32292219_32302620_32302734_32316664_32316783_32324478_32324554_32326938_32327078_32327535_32327678_32329067_32329161_32330577_32330687_32330767_32330909_32331473_32331583_32331675_32331807_32332089_32332243_32332700_32332750_32333016
transcript_62872.known	chr15	-	5938	27	FSM	ENSG00000104067.17	ENST00000677774.1	5938	27	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_1	94.9243314341737	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTGGGGATATTTTTTT	-29821611	False	NA	NA	False	AAGAAA	-10	NA	29822077	29700772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_29701690_29704161_29704306_29705527_29705746_29708558_29709037_29710830_29711001_29716610_29716839_29718020_29718119_29718265_29719139_29720357_29720709_29726378_29726480_29726780_29726992_29727936_29728020_29732432_29732529_29732630_29732816_29733093_29733314_29734273_29734383_29737263_29737415_29741330_29741437_29742641_29742782_29761138_29761287_29761600_29761770_29762334_29762439_29766265_29766543_29772063_29772167_29773232_29773358_29800645_29800703_29822001
transcript_62879.nic	chr15	-	783	4	ISM	ENSG00000104067.17	ENST00000495972.6	2890	9	-17	13181	-16	-13181	5prime_fragment	FALSE	canonical	3	498	junction_1	26.5497436689865	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGGGAAAAATGCAAAAATT	NA	False	NA	-20	True	NA	NA	NA	29822519	29772083	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_29772167_29773232_29773358_29800645_29800703_29822001
transcript_62884.known	chr15	+	1158	5	FSM	ENSG00000178081.12	ENST00000568486.5	1158	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.71729831301464	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAAACTCTGGTTACTGC	NA	False	NA	NA	False	AAAAAG	-26	NA	30103731	30131757	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_30104009_30110301_30110427_30116891_30116939_30127684_30127764_30131127
transcript_62886.known	chr15	-	3411	10	FSM	ENSG00000166664.15	ENST00000299847.7	3411	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	8.4210201428873	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCTCACTCATTTCTGG	-30393527	False	NA	NA	False	AATAAA	-22	NA	30393540	30360565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_30362812_30367417_30367528_30371097_30371185_30372146_30372342_30372977_30373146_30377029_30377110_30380352_30380400_30383318_30383383_30386862_30386988_30393251
transcript_62888.known	chr15	+	573	6	FSM	ENSG00000260128.6	ENST00000561753.5	573	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	2.1540659228538	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAACAGTCCCAGAACTCC	NA	False	NA	NA	False	TTTAAA	-37	NA	30572764	30600107	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_30573017_30579287_30579413_30582893_30582958_30585877_30585925_30596659_30596739_30600101
transcript_62890.known	chr15	+	798	4	FSM	ENSG00000260128.6	ENST00000569682.5	798	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	4.78423336480244	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCGCACAACTGCACTTCAC	30572957	False	NA	NA	False	NA	NA	NA	30572968	30600647	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_30573017_30579287_30579413_30596659_30596739_30600101
transcript_62898.known	chr15	+	5188	19	FSM	ENSG00000261794.2	ENST00000566740.2	5188	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.372677996249965	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTGTTTTTGCCTTAAAA	NA	False	NA	NA	False	AATAAA	-19	NA	30604027	30617752	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_30604174_30605842_30605963_30606854_30606915_30607095_30607177_30608029_30608069_30608330_30608379_30608466_30608552_30608646_30608757_30609805_30609893_30609998_30610107_30610301_30610390_30610765_30611023_30611277_30611347_30612596_30612673_30613103_30613196_30613769_30613871_30613952_30614051_30614145_30614302_30614385
transcript_62901.known	chr15	+	3256	11	FSM	ENSG00000285077.3	ENST00000428041.4	3256	11	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_10	50.3079516577648	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTGTGAATATCTGATC	NA	False	NA	12	True	AATAAA	-25	NA	30625965	30649529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_30626950_30630702_30630774_30633489_30633587_30634169_30634424_30635079_30635189_30635486_30635634_30638745_30638821_30644638_30644703_30646113_30646296_30647667_30647715_30648303
transcript_62903.known	chr15	-	2833	17	FSM	ENSG00000166912.17	ENST00000567567.5	2833	17	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_10	19.6341539160719	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTGTCTCCATCCATT	-30991566	False	215	NA	False	NA	NA	NA	30991578	30941208	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_30942073_30942889_30943073_30947129_30947301_30948301_30948472_30951967_30952039_30953561_30953632_30954762_30954894_30958862_30958952_30959033_30959122_30960880_30961074_30965874_30966041_30967919_30968011_30974313_30974457_30974930_30975004_30976818_30976956_30990776_30990838_30991446
transcript_62907.known	chr15	-	4985	16	FSM	ENSG00000166912.17	ENST00000435680.6	4985	16	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_10	9.88736567544662	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTTGTCAGTATGAAAT	-30991616	False	NA	-21	True	AATAAA	-18	NA	30991628	30938940	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_30942073_30942889_30943073_30947129_30947301_30948301_30948472_30951967_30952039_30953561_30953632_30954762_30954894_30958862_30958952_30959033_30959122_30960880_30961074_30967919_30968011_30974313_30974457_30974930_30975004_30976818_30976956_30990776_30990838_30991446
transcript_62910.known	chr15	+	4753	15	FSM	ENSG00000198690.10	ENST00000656435.1	4753	15	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	55.3128855342266	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAATATTTGCAAAACT	30899952	True	NA	NA	False	AATAAA	-2	NA	30903863	30943085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_30903888_30904511_30905898_30908117_30908259_30910613_30910816_30913857_30914092_30918163_30918296_30920544_30920654_30922234_30922355_30925126_30925292_30925788_30925940_30928552_30928657_30929202_30929398_30930542_30930672_30937118_30937260_30941565
transcript_62911.known	chr15	+	4442	15	FSM	ENSG00000198690.10	ENST00000657391.1	4442	15	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	54.4078044371712	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAAACCCGCATTAGCAG	30899952	True	NA	NA	False	AAAAAG	-12	NA	30903863	30942767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_30903895_30904511_30905898_30908117_30908259_30910613_30910816_30913857_30914092_30918163_30918296_30920544_30920654_30922234_30922355_30925126_30925292_30925788_30925940_30928552_30928657_30929202_30929398_30930542_30930672_30937118_30937260_30941565
transcript_62912.known	chr15	+	3542	15	FSM	ENSG00000198690.10	ENST00000664837.1	3542	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	63.1949122855275	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATAAATATTTGCAAAAC	30899992	True	NA	NA	False	AATAAA	-1	NA	30903903	30943084	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_30904025_30904511_30904591_30908117_30908259_30910613_30910816_30913857_30914092_30918163_30918296_30920544_30920654_30922234_30922355_30925126_30925292_30925788_30925940_30928552_30928657_30929202_30929398_30930542_30930672_30937118_30937260_30941565
transcript_62914.known	chr15	+	4849	15	FSM	ENSG00000198690.10	ENST00000362065.9	4849	15	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_10	27.8047125648931	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTCTCATGAATGCCTT	30900003	True	NA	NA	False	AATAAA	-25	NA	30903914	30943108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_30904012_30904511_30905898_30908117_30908259_30910613_30910816_30913857_30914092_30918163_30918296_30920544_30920654_30922234_30922355_30925126_30925292_30925788_30925940_30928552_30928657_30929202_30929398_30930542_30930672_30937118_30937260_30941565
transcript_62925.known	chr15	+	7413	14	FSM	ENSG00000198690.10	ENST00000656307.1	7413	14	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	25.2415549179237	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTATAGCAAATTCCTGC	30900000	True	NA	NA	False	NA	NA	NA	30903911	30943056	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_30904012_30904511_30905898_30908117_30908259_30910613_30910816_30913857_30914092_30918163_30918296_30920544_30920654_30922234_30922355_30925126_30925292_30925788_30928657_30929202_30929398_30930542_30930672_30937118_30937260_30941565
transcript_62933.known	chr15	+	4441	11	FSM	ENSG00000198690.10	ENST00000602886.2	4441	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_10	60.3580152092496	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACTGGGAATGGCGTGAA	30900075	False	NA	-16	True	TATAAA	-18	NA	30903986	30928383	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_30904012_30904511_30905898_30908117_30908259_30910613_30910816_30913857_30914092_30918163_30918296_30920544_30920654_30922234_30922355_30925126_30925292_30925788_30925940_30926607
transcript_62934.known	chr15	+	2738	4	FSM	ENSG00000198690.10	ENST00000561594.5	2738	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	99.6739127800694	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGGCTCACACCTGTA	30899940	True	NA	NA	False	ATTAAA	-22	NA	30903851	30911788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_30903888_30904511_30905898_30908117_30908259_30910613
transcript_62935.known	chr15	+	2157	4	FSM	ENSG00000198690.10	ENST00000658773.1	2157	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	97.8059302905504	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACGTAACAATTTACCAAAA	30899952	True	NA	NA	False	NA	NA	NA	30903863	30911212	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_30903895_30904511_30905898_30908117_30908259_30910613
transcript_62937.known	chr15	+	2304	4	FSM	ENSG00000198690.10	ENST00000565466.5	2304	4	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	29.8477618740315	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTTTCAGTTGAAAATTAC	30899981	True	NA	NA	False	NA	NA	NA	30903892	30911271	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_30904012_30904511_30905898_30908117_30908259_30910613
transcript_62942.known	chr15	+	4354	16	FSM	ENSG00000198690.10	ENST00000667837.1	4354	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	82.6837079209414	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTTGCTTATAGCAAAT	NA	False	NA	NA	False	NA	NA	NA	30890558	30943050	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_30890565_30903894_30904012_30904511_30905354_30908117_30908259_30910613_30910816_30913857_30914092_30918082_30918296_30920544_30920654_30922234_30922355_30925126_30925292_30925788_30925940_30928552_30928657_30929202_30929398_30930542_30930672_30937118_30937260_30941565
transcript_62944.known	chr15	+	468	2	FSM	ENSG00000259448.3	ENST00000557928.1	468	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGATTATATTAGTAAGATG	NA	False	NA	NA	False	NA	NA	NA	31216020	31224445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_31216038_31223994
transcript_62945.known	chr15	+	1450	2	FSM	ENSG00000259448.3	ENST00000559292.2	1450	2	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTGATTCCTGCATTA	NA	False	NA	NA	False	NA	NA	NA	31216019	31220720	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_31216038_31219288
transcript_62946.known	chr15	+	6845	2	FSM	ENSG00000169926.11	ENST00000307145.4	6845	2	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGGAGCTAGTTTCTT	NA	False	NA	21	True	AATAAA	-21	NA	31326834	31377899	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_31327790_31372009
transcript_62949.known	chr15	-	1630	6	FSM	ENSG00000169918.10	ENST00000558371.5	1630	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	9.38083151964686	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTTTCTCAGGCACGCAT	-31870295	False	NA	NA	False	TATAAA	-22	NA	31870578	31558182	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_31559188_31570017_31570198_31655095_31655251_31656982_31657078_31689358_31689482_31870506
transcript_62951.known	chr15	+	6149	10	FSM	ENSG00000175344.19	ENST00000306901.9	6149	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_9	3.93778781037097	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCGTAGTTTTGTAATAT	32029839	True	NA	NA	False	AATAAA	-27	NA	32030514	32173018	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_32030650_32030897_32031038_32101302_32101348_32111789_32111900_32153906_32153987_32157607_32157776_32158411_32158607_32159568_32159656_32163225_32163336_32167939
transcript_62957.known	chr15	+	2084	9	FSM	ENSG00000175344.19	ENST00000637519.1	2084	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	8.45207075218848	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGATGCTGTTTCTACA	NA	False	NA	NA	False	NA	NA	NA	32030461	32169010	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_32030650_32030897_32031038_32101302_32101348_32153906_32153987_32157607_32157776_32158411_32158607_32159568_32159656_32163225_32163336_32167939
transcript_62959.known	chr15	+	1788	8	FSM	ENSG00000175344.19	ENST00000437966.3	1788	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	7.55928946018454	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTTCCAATAATTGACTG	32029880	True	NA	NA	False	AATAAA	-15	NA	32030555	32168888	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_32030650_32030897_32031038_32101302_32101348_32157607_32157776_32158411_32158607_32159568_32159656_32163225_32163336_32167939
transcript_62962.known	chr15	+	3152	13	FSM	ENSG00000198826.11	ENST00000543522.5	3152	13	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	112.172826725351	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATGATGTACATGTTAGT	32615049	True	NA	12	True	AATAAA	-23	NA	32615570	32637903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_32615608_32615804_32615919_32620107_32620179_32623491_32623589_32624172_32624427_32625079_32625244_32625486_32625634_32628727_32628803_32629594_32629763_32632978_32633109_32633932_32634042_32635776_32635916_32636256
transcript_62974.known	chr15	+	5876	12	FSM	ENSG00000198826.11	ENST00000361627.8	5876	12	0	0	0	0	multi-exon	TRUE	canonical	3	270	junction_11	24.829667671844	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGTTATCTAATAACAAC	32614982	True	NA	10	True	AATAAA	-14	NA	32615503	32639941	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_32616341_32620107_32620179_32623491_32623589_32624172_32624427_32625079_32625244_32625486_32625634_32628727_32628803_32629594_32629763_32632978_32633109_32633932_32634042_32635776_32635916_32636256
transcript_6298.nnic	chr1	+	2013	13	NIC	ENSG00000116478.12	novel	2118	14	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	3	46	junction_6	317.679870309719	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCTGAGCTTGTTTCCT	32282677	True	NA	16	True	AATAAA	-17	NA	32292094	32333626	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_32292219_32302620_32302734_32316664_32316783_32324478_32324554_32326938_32327078_32327535_32327678_32330577_32330687_32330767_32330909_32331473_32331583_32331675_32331807_32332089_32332243_32332700_32332750_32333016
transcript_62984.known	chr15	+	2422	11	FSM	ENSG00000198826.11	ENST00000567348.5	2422	11	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_7	20.9057408383439	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCATGTGCTTGGGTAT	32615017	True	NA	6	True	ATTAAA	-15	NA	32615538	32636181	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_32616341_32620107_32620179_32623491_32623589_32624172_32624427_32625079_32625244_32625486_32625634_32628727_32628803_32629594_32629763_32632978_32633109_32633932_32634042_32635776
transcript_62989.known	chr15	+	1238	6	FSM	ENSG00000166922.9	ENST00000300175.9	1198	6	-34	-6	0	0	multi-exon	FALSE	canonical	3	65	junction_3	31.891064579283	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAGTTTTCTTTTTAAA	32639463	True	NA	31	True	AATAAA	-21	NA	32641675	32697098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_32641779_32643585_32643819_32679765_32679916_32684556_32684670_32691709_32691764_32696513
transcript_62991.known	chr15	+	1235	6	FSM	ENSG00000166922.9	ENST00000413748.6	1235	6	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_3	22.6061938415117	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAGTTTTCTTTTTAAA	32639463	True	NA	31	True	AATAAA	-21	NA	32641675	32697098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_32641779_32643585_32643819_32679765_32679916_32684559_32684670_32691709_32691764_32696513
transcript_62994.known	chr15	+	949	5	FSM	ENSG00000166922.9	ENST00000497208.5	949	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	56.38705525207	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCTCAGATTTCTTGCA	32639489	True	NA	10	True	AATAAA	-14	NA	32641701	32696889	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_32641779_32643585_32643819_32679765_32679916_32684556_32684670_32696513
transcript_62995.nic	chr15	+	1205	5	ISM	ENSG00000166922.9	ENST00000413748.6	1235	6	-10	4790	-10	0	5prime_fragment	FALSE	canonical	3	90	junction_3	24.3053492054733	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTGTCTGTTGAATT	32639453	True	NA	9	True	NA	NA	NA	32641665	32692308	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_32641779_32643585_32643819_32679765_32679916_32684559_32684670_32691709
transcript_62996.known	chr15	+	1148	5	FSM	ENSG00000166922.9	ENST00000494364.5	1148	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	55.1968069728675	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTGGCATATGGAGTTT	32639486	True	NA	21	True	AATAAA	-11	NA	32641698	32697088	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_32641779_32643585_32643819_32679765_32679916_32684559_32684670_32696513
transcript_62997.known	chr15	+	659	4	FSM	ENSG00000166922.9	ENST00000471027.1	659	4	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	39.6063967897443	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCCAGAAAGTCTGTCCT	32641410	False	NA	NA	False	NA	NA	NA	32643622	32691909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_32643819_32679765_32679916_32684556_32684670_32691709
transcript_62999.known	chr15	-	4060	2	FSM	ENSG00000248905.10	ENST00000558197.1	4060	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGACTACTGTTCTTTTC	-33068136	False	109	NA	False	AATAAA	-18	NA	33068162	33062666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_33065075_33066510
transcript_63.known	ERCC-00165	+	856	1	FSM	ERCC-00165A	DQ668363	856	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	856	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00165_+_0_900
transcript_63002.known	chr15	-	1633	6	FSM	ENSG00000169857.9	ENST00000306730.8	1633	6	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_5	13.7317151150175	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTCCTTTCCTTTCTTGT	-34036963	True	NA	-3	True	AATAAA	-19	NA	34039204	33866226	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_33866729_33867494_33867856_33870934_33871031_33875924_33875996_34003031_34003210_34038779
transcript_63004.known	chr15	-	1069	5	FSM	ENSG00000134153.10	ENST00000256545.9	1069	5	0	0	0	0	multi-exon	FALSE	canonical	3	693	junction_1	29.7405447159261	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTTTCTTTTTTTTTAC	-34093620	True	NA	3	True	ATTAAA	-23	NA	34101862	34084016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_34084487_34088052_34088134_34090316_34090456_34095894_34096015_34101603
transcript_63005.known	chr15	-	581	4	FSM	ENSG00000134153.10	ENST00000527822.5	581	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	346.218941647559	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTCCAGAGCTGGCATTT	-34093565	False	NA	NA	False	AGTAAA	-38	NA	34101807	34084329	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_34084487_34088052_34088134_34090316_34090456_34101603
transcript_63011.known	chr15	-	2740	10	FSM	ENSG00000134152.11	ENST00000256544.8	2740	10	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_4	33.5592345297419	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGTAGTTATCACTGTC	-34207115	True	NA	-1	True	GATAAA	-23	NA	34210096	34140673	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_34142372_34145397_34145492_34146760_34146851_34147199_34147290_34147379_34147431_34148631_34148751_34152789_34153070_34154643_34154685_34163559_34163691_34209950
transcript_63030.known	chr15	-	924	5	FSM	ENSG00000134152.11	ENST00000560671.5	924	5	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_4	10.3531396204243	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTCGAACTCCTGAGCTC	-34207080	True	NA	NA	False	TTTAAA	-42	NA	34210061	34148389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_34148751_34152789_34153070_34154643_34154685_34163559_34163691_34209950
transcript_63031.known	chr15	-	853	6	FSM	ENSG00000134152.11	ENST00000560108.5	853	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	165.917569895415	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAACTTGTAGCTTATTT	-34207098	True	NA	NA	False	NA	NA	NA	34210079	34148657	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_34148751_34152789_34153070_34154643_34154685_34163559_34163691_34177820_34178000_34209950
transcript_63033.known	chr15	-	1553	1	FSM	ENSG00000134152.11	ENST00000560915.1	1553	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTGAGTGGTTATTCTG	-34207088	True	NA	NA	False	AATAAA	-33	NA	34210069	34208516	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_34208500_34210100
transcript_63035.known	chr15	+	1006	5	FSM	ENSG00000128463.13	ENST00000558205.5	1006	5	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	548.5	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCACAAGTTCCTTATTT	34208368	True	NA	22	True	AATAAA	-31	NA	34225036	34230156	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_34225201_34225535_34225659_34227692_34227847_34228428_34228590_34229752
transcript_63038.known	chr15	+	852	4	FSM	ENSG00000128463.13	ENST00000249209.8	852	4	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_3	570.579237851034	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAAAAGTTGCACAAGT	34208344	True	NA	13	True	AATAAA	-22	NA	34225012	34230147	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_34225201_34225535_34225651_34227692_34227847_34229752
transcript_63041.known	chr15	-	507	2	FSM	ENSG00000182117.6	ENST00000328848.6	507	2	0	0	0	0	multi-exon	FALSE	canonical	3	6080	junction_1	0	1571	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTATTTTGTGAGTTGTT	-34321083	True	NA	-25	True	ATTAAA	-20	NA	34343136	34341718	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_34342109_34343019
transcript_63043.known	chr15	+	4109	8	FSM	ENSG00000184507.16	ENST00000537011.6	4109	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.43276948084663	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCAGAGTGCCCTTTTTCT	NA	False	NA	20	True	AATAAA	-20	NA	34343314	34357735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_34343703_34345941_34346036_34347968_34348678_34350703_34350833_34353735_34353873_34354445_34354733_34355020_34355138_34355487
transcript_63044.known	chr15	+	3922	7	FSM	ENSG00000184507.16	ENST00000438749.7	3922	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.70782512765993	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGAGTGCCCTTTTTCTGT	NA	False	NA	22	True	AATAAA	-22	NA	34343409	34357737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_34343703_34347968_34348678_34350703_34350833_34353735_34353873_34354445_34354733_34355020_34355138_34355487
transcript_63045.nnic	chr15	-	2101	16	NNC	ENSG00000176454.15	novel	2165	14	NA	NA	-77	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_4	76.7597695555571	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATATTGATGTTACCATT	-34367263	False	NA	NA	False	ATTAAA	-15	NA	34367273	34358908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_-_34359303_34359588_34359746_34360110_34360210_34360753_34360828_34361168_34361230_34361399_34361533_34362195_34362322_34362572_34362656_34362781_34362837_34363421_34363457_34363660_34363720_34364012_34364074_34364193_34364307_34365007_34365229_34365558_34365702_34366986
transcript_63050.nnic	chr15	-	1975	15	NNC	ENSG00000176454.15	novel	2165	14	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	68.402955241088	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATATTGATGTTACCATT	-34365474	True	NA	NA	False	ATTAAA	-15	NA	34367208	34358908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_-_34359303_34359588_34359746_34360110_34360210_34360753_34360828_34361399_34361533_34362195_34362322_34362572_34362656_34362781_34362837_34363421_34363457_34363660_34363720_34364012_34364074_34364193_34364307_34365007_34365229_34365558_34365702_34366986
transcript_63052.nnic	chr15	-	1976	15	NNC	ENSG00000176454.15	novel	2165	14	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	66.5748006503411	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATATTGATGTTACCATT	-34365488	True	NA	NA	False	ATTAAA	-15	NA	34367222	34358908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_-_34359303_34359588_34359746_34360110_34360210_34361168_34361230_34361399_34361533_34362195_34362322_34362572_34362656_34362781_34362837_34363421_34363457_34363660_34363720_34364012_34364074_34364193_34364307_34365007_34365229_34365558_34365702_34366986
transcript_63059.nnic	chr15	-	2120	14	NNC	ENSG00000176454.15	novel	2165	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_3	52.4380728029734	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATATTGATGTTACCATT	-34365462	True	NA	NA	False	ATTAAA	-15	NA	34367196	34358908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_-_34359303_34359588_34359746_34360110_34360210_34361168_34361533_34362195_34362322_34362572_34362656_34362781_34362837_34363421_34363457_34363660_34363720_34364012_34364074_34364193_34364307_34365007_34365229_34365558_34365702_34366986
transcript_63062.known	chr15	-	2165	14	FSM	ENSG00000176454.15	ENST00000314891.11	2165	14	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_3	28.9173480414695	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGCTACCATTCCATATT	-34365462	True	NA	NA	False	ATTAAA	-13	NA	34367196	34358632	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_34359303_34359588_34359746_34360110_34360210_34361399_34361533_34362195_34362322_34362572_34362656_34362781_34362837_34363421_34363457_34363660_34363720_34364012_34364074_34364193_34364307_34365007_34365229_34365558_34365702_34366986
transcript_63119.nic	chr15	-	1711	10	ISM	ENSG00000215252.12	ENST00000683415.1	5607	24	-47	8721	-47	-6857	5prime_fragment	FALSE	canonical	3	30	junction_4	24.7451204817095	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGGGCGTGGTGGCGGGCG	-34583463	False	NA	NA	False	AATACA	-10	NA	34583698	34533815	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_34534174_34535864_34535990_34537343_34537648_34544857_34544954_34545377_34545427_34546934_34546983_34551137_34551277_34552894_34553092_34553744_34553957_34583515
transcript_63127.nic	chr15	-	1795	8	ISM	ENSG00000215252.12	ENST00000683415.1	5607	24	-431	12066	-431	7697	5prime_fragment	FALSE	canonical	3	30	junction_2	27.4434483464243	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTAATGGGCTTGTCCAA	-34583847	False	235	NA	False	ATTAAA	-28	NA	34584082	34537160	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_34537648_34544857_34544954_34545377_34545427_34546934_34546983_34551137_34551277_34552894_34553092_34553744_34553957_34583515
transcript_63129.known	chr15	-	9597	35	FSM	ENSG00000021776.11	ENST00000156471.10	9597	35	0	0	0	0	multi-exon	TRUE	canonical	3	352	junction_24	42.1609722119245	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTGGCTTTCTGTTCT	-34961651	True	NA	0	True	AGTAAA	-21	NA	34969742	34851781	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_34857107_34860041_34860156_34862866_34863042_34867523_34867610_34870751_34870923_34873827_34874000_34874676_34874865_34875934_34876007_34882501_34882640_34884524_34884735_34886525_34886662_34890214_34890325_34893662_34893774_34896896_34896967_34897558_34897706_34900621_34900864_34904335_34904506_34906544_34906713_34910134_34910314_34915037_34915180_34918257_34918379_34920331_34920435_34927034_34927139_34930257_34930372_34932317_34932435_34934570_34934636_34938736_34938814_34940898_34941000_34942011_34942081_34944287_34944429_34948263_34948385_34952884_34952921_34960773_34960815_34964233_34964291_34969538
transcript_63148.known	chr15	-	5439	3	FSM	ENSG00000198146.4	ENST00000356321.4	5439	3	0	0	0	0	multi-exon	FALSE	canonical	3	1513	junction_1	26	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGCCTTTTTTTTGGGG	-34977698	True	NA	-3	True	AATAAA	-16	NA	34988287	34978340	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_34983491_34987556_34987674_34988115
transcript_63158.known	chr15	-	563	2	FSM	ENSG00000198146.4	ENST00000559564.1	563	2	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACCACAGAGGAAAGATGG	-34977636	True	NA	NA	False	AAGAAA	-28	NA	34988225	34983037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_34983491_34988115
transcript_63167.known	chr15	-	2098	9	FSM	ENSG00000134146.12	ENST00000256538.9	2098	9	0	0	0	0	multi-exon	FALSE	canonical	2	110	junction_1	29.6497786669648	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTTTTTGTGTGAAGATA	-35544084	True	NA	-4	True	AATAAA	-22	NA	35546165	35370879	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_35372204_35373520_35373609_35381821_35381917_35410834_35410897_35450684_35450804_35454746_35454821_35538273_35538468_35542412_35542508_35546118
transcript_63172.nic	chr15	-	2295	5	ISM	ENSG00000134146.12	ENST00000256538.9	2098	9	-66	78105	-38	40984	5prime_fragment	FALSE	canonical	3	181	junction_1	13.0647426304539	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGACAATAAGACCTTTCT	-35546125	False	NA	NA	False	AAAAAG	-36	NA	35546231	35448984	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_35450804_35454746_35454821_35538273_35538468_35542412_35542508_35546118
transcript_63173.known	chr15	-	3648	4	FSM	ENSG00000134146.12	ENST00000440392.3	3648	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	92.6318879580173	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCCTGGTTTCTTCATGT	-35544111	True	NA	NA	False	AATAAA	-15	NA	35546192	35518993	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_35522279_35538273_35538468_35542412_35542508_35546118
transcript_63176.known	chr15	+	2240	12	FSM	ENSG00000186073.14	ENST00000437989.6	2240	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_11	27.6940188070628	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACTTGCGTTTTGTATTT	36578585	False	NA	NA	False	AATAAA	-16	NA	36579843	36810244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_36579962_36644277_36644324_36645222_36645288_36654097_36654159_36657832_36657906_36691684_36691765_36692125_36692176_36697322_36697391_36709222_36709289_36709855_36709962_36808323_36808490_36808903
transcript_63181.known	chr15	+	2872	11	FSM	ENSG00000186073.14	ENST00000566621.6	2872	11	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_7	12.0847010720166	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACTTGCGTTTTGTATTT	36578367	True	NA	NA	False	AATAAA	-16	NA	36579625	36810244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_36579962_36644277_36644324_36645222_36645288_36654097_36654159_36657832_36657906_36691684_36691765_36692125_36692176_36697322_36697391_36709222_36709289_36709855_36709962_36808323
transcript_63185.known	chr15	+	2506	10	FSM	ENSG00000186073.14	ENST00000642817.1	2506	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	31.1626557133873	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAACTTCTGTTTCAGTAT	36578393	True	NA	NA	False	ATTAAA	-44	NA	36579651	36809950	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_36579962_36645222_36645288_36654097_36654159_36657832_36657906_36691684_36691765_36692125_36692176_36697322_36697391_36709222_36709289_36709855_36709962_36808323
transcript_6319.nnic	chr1	-	1467	3	NNC	ENSG00000175130.7	novel	1546	2	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	6724	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGCTTTAATGAGTGGT	-32336210	False	NA	-10	True	AATAAA	-14	NA	32336237	32333838	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_32335098_32335946_32336107_32336189
transcript_63191.known	chr15	+	2677	11	FSM	ENSG00000186073.14	ENST00000569302.6	2677	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	32.0686763057037	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACACACACTTTATACAAA	36578386	True	NA	NA	False	NA	NA	NA	36579644	36810050	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_36579962_36644277_36644324_36645222_36645288_36654097_36654159_36657832_36657906_36691684_36691765_36692125_36692176_36697322_36697391_36709222_36709289_36709837_36709962_36808323
transcript_63193.known	chr15	+	7270	7	FSM	ENSG00000166068.13	ENST00000299084.9	7270	7	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_6	6.50640709864771	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAAATAGTGTTTCTTTT	38252777	False	NA	10	True	AATAAA	-19	NA	38252835	38357249	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_38253218_38299372_38299548_38322240_38322410_38324762_38324810_38339736_38339896_38349421_38349524_38351013
transcript_63199.known	chr15	+	1177	5	FSM	ENSG00000166068.13	ENST00000561205.1	1177	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	95.7140924838135	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAAGAACCCAGGGCTT	38252789	False	NA	NA	False	AGTAAA	-32	NA	38252847	38326363	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_38253218_38299372_38299548_38322240_38322410_38324762_38324810_38325947
transcript_63201.known	chr15	+	3111	7	FSM	ENSG00000171262.11	ENST00000491535.5	3111	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	4.25897744639355	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	38445315	True	NA	NA	False	NA	NA	NA	38454153	38483665	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_38454233_38464031_38464178_38465268_38465404_38470226_38470406_38473504_38473586_38474181_38474299_38481291
transcript_63203.known	chr15	-	2816	12	FSM	ENSG00000150667.8	ENST00000350221.4	2816	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	2.60958183534679	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTTTTGCTGGCACAT	-39782677	True	NA	NA	False	AATAAA	-22	NA	39782841	39600030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_39600927_39617734_39618246_39713443_39713582_39726588_39726748_39738090_39738202_39739664_39739790_39741804_39741901_39763820_39763915_39765591_39765747_39770426_39770611_39776398_39776532_39782627
transcript_63204.known	chr15	+	7789	22	FSM	ENSG00000137801.11	ENST00000260356.6	7789	22	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_7	9.69769825648968	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGTGTTTCTTTCTGTC	39578996	True	NA	NA	False	TATAAA	-40	NA	39581078	39599466	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_39581229_39581828_39581925_39582192_39582753_39583616_39583693_39583987_39584188_39584299_39584423_39585469_39585564_39587346_39587521_39588041_39588219_39588525_39588700_39588958_39589087_39589201_39589355_39589804_39590024_39590515_39590624_39591190_39591351_39591504_39591624_39592567_39592803_39592999_39593228_39593396_39593669_39594098_39594197_39594300_39594441_39595361
transcript_6321.known	chr1	-	1546	2	FSM	ENSG00000175130.7	ENST00000329421.8	1546	2	0	0	0	0	multi-exon	FALSE	canonical	3	13448	junction_1	0	5890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGCTTTAATGAGTGGT	-32269764	True	NA	-10	True	AATAAA	-14	NA	32336233	32333838	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32335098_32335946
transcript_63213.nic	chr15	-	4553	4	Fusion	ENSG00000166073.11_ENSG00000259580.1	novel	1035	6	NA	NA	-674	-112	multi-exon	FALSE	canonical	2	16	junction_2	197.035247833703	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCTGGTTGGGTATGTTT	-39916004	True	NA	-13	True	AATAAA	-14	NA	39920940	39799143	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr15_-_39802255_39807005_39807259_39860819_39860923_39919854
transcript_63217.nnic	chr15	-	4635	4	NNC	ENSG00000166073.11	novel	3912	3	NA	NA	-677	-115	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_2	158.865421732428	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAATCTGGTTGGGTATG	-39916007	True	NA	-16	True	AATAAA	-11	NA	39920943	39799146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_-_39802255_39805219_39805405_39807005_39807259_39919854
transcript_63218.known	chr15	-	828	3	FSM	ENSG00000166073.11	ENST00000558041.5	828	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	15	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCATGGCTGAGGCCAG	-39919923	False	NA	NA	False	NA	NA	NA	39919951	39801626	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_39802255_39860819_39860923_39919854
transcript_6322.known	chr1	-	2759	2	FSM	ENSG00000225828.2	ENST00000416512.1	2759	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCGGGCTGGCAGTGTAT	NA	False	NA	-4	True	AATAAA	-24	NA	32364223	32361270	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32361536_32361729
transcript_63220.known	chr15	-	3912	3	FSM	ENSG00000166073.11	ENST00000561100.2	3912	3	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_2	35	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGTTTTATGAGCTATA	-39914110	True	NA	NA	False	AATAAA	-28	NA	39920266	39799007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_39802255_39807005_39807259_39919854
transcript_63224.nnic	chr15	-	3715	2	NIC	ENSG00000166073.11	novel	3912	3	NA	NA	-51	5	combination_of_known_splicesites	FALSE	canonical	3	209	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTATGAGCTATATTTTC	-39920289	False	NA	NA	False	AATAAA	-33	NA	39920317	39799002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_39802255_39919854
transcript_63228.nnic	chr15	-	4367	2	NIC	ENSG00000166073.11	novel	3912	3	NA	NA	-703	5	combination_of_known_splicesites	FALSE	canonical	3	209	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTATGAGCTATATTTTC	NA	False	NA	NA	False	AATAAA	-33	NA	39920969	39799002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_39802255_39919854
transcript_63229.nnic	chr15	-	4223	2	NIC	ENSG00000166073.11	novel	3912	3	NA	NA	-703	-115	combination_of_known_splicesites	FALSE	canonical	3	209	junction_1	0	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAATCTGGTTGGGTATG	NA	False	NA	-16	True	AATAAA	-11	NA	39920969	39799146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_39802255_39919854
transcript_6323.known	chr1	-	2925	12	FSM	ENSG00000160058.19	ENST00000444377.5	2925	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	79.2434266116567	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTGAAAGGTGTCTGGG	-32390771	True	NA	-10	True	ATTAAA	-12	NA	32394428	32365112	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32366655_32368446_32368551_32369229_32369339_32376261_32376742_32377969_32378049_32378214_32378284_32378723_32378840_32381213_32381269_32383829_32383998_32386778_32386896_32394079_32394141_32394403
transcript_63231.known	chr15	+	5538	39	FSM	ENSG00000128829.12	ENST00000263791.10	5538	39	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_20	54.5516096585929	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTGCTTTTTAATTGTA	39928547	True	NA	13	True	AATAAA	-13	NA	39934114	40035591	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_39934340_39939504_39939618_39943382_39943486_39949115_39949269_39953903_39953985_39955619_39955769_39961783_39961900_39965685_39965844_39967343_39967880_39972907_39973015_39973591_39973750_39976413_39976845_39978077_39978148_39985804_39985889_39987982_39988106_39990272_39990378_39992174_39992230_39992768_39992849_39996963_39997066_39998730_39998785_40000987_40001225_40002712_40002789_40003192_40003315_40007015_40007066_40008026_40008196_40009613_40009731_40011280_40011347_40016501_40016673_40017107_40017243_40019092_40019201_40020898_40021028_40022518_40022606_40025976_40026090_40029405_40029465_40030358_40030457_40032168_40032238_40032756_40032802_40034325_40034445_40035026
transcript_63239.nic	chr15	+	2693	12	ISM	ENSG00000128829.12	ENST00000263791.10	5538	39	-48	58432	-48	-1133	5prime_fragment	FALSE	canonical	3	388	junction_4	43.288194332809	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCACTTTTAGAGAGTAA	39928499	True	NA	NA	False	TTTAAA	-25	NA	39934066	39977159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_39934340_39939504_39939618_39943382_39943486_39949115_39949269_39953903_39953985_39955619_39955769_39961783_39961900_39965685_39965844_39967343_39967880_39972907_39973015_39973591_39973750_39976413
transcript_63240.nic	chr15	+	3406	12	ISM	ENSG00000128829.12	ENST00000263791.10	5538	39	-48	57719	-48	-420	5prime_fragment	FALSE	canonical	3	388	junction_4	43.288194332809	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGGCTAATTTTTATTAAA	39928499	True	NA	23	True	ATTAAA	-19	NA	39934066	39977872	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_39934340_39939504_39939618_39943382_39943486_39949115_39949269_39953903_39953985_39955619_39955769_39961783_39961900_39965685_39965844_39967343_39967880_39972907_39973015_39973591_39973750_39976413
transcript_63243.nic	chr15	+	703	5	ISM	ENSG00000128829.12	ENST00000559624.5	3548	11	-79	21465	-48	7069	5prime_fragment	FALSE	canonical	3	388	junction_4	54.172756067972	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAAATGGCTAAGCAG	39928499	True	NA	56	True	GATAAA	-15	NA	39934066	39953964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_39934340_39939504_39939618_39943382_39943486_39949115_39949269_39953903
transcript_63244.nic	chr15	+	642	4	ISM	ENSG00000128829.12	ENST00000559624.5	3548	11	-79	26161	-48	2373	5prime_fragment	TRUE	canonical	3	392	junction_3	56.3461523876199	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGATGCCCTTGTCGATG	39928499	True	NA	NA	False	NA	NA	NA	39934066	39949268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_39934340_39939504_39939618_39943382_39943486_39949115
transcript_63245.known	chr15	+	687	4	FSM	ENSG00000128829.12	ENST00000560648.1	687	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	224.206749824056	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACATTGATTTCTACAGA	39928608	True	NA	NA	False	AATAAA	-20	NA	39934175	39946895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_39934340_39939504_39939618_39943382_39943486_39946588
transcript_63247.known	chr15	-	1119	5	FSM	ENSG00000140319.11	ENST00000267884.11	1119	5	0	0	0	0	multi-exon	FALSE	canonical	3	7515	junction_4	758.788961108423	1858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTCATTACAGCCAAGGG	-39967721	True	NA	42	True	NA	NA	NA	40039181	40035689	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_40036501_40036985_40037019_40038281_40038395_40038875_40038949_40039092
transcript_63249.known	chr15	-	791	6	FSM	ENSG00000140319.11	ENST00000558527.5	791	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3878.28268180647	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTCTCTTTATTCCTT	-39967704	True	NA	-24	True	ATTAAA	-16	NA	40039164	40036040	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_40036501_40036985_40037019_40037308_40037349_40038281_40038395_40038875_40038949_40039092
transcript_63252.known	chr15	+	1058	4	FSM	ENSG00000248508.9	ENST00000667323.1	1058	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	10.6249183003395	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTGGATTCTCTGTTTCC	40038788	True	NA	NA	False	ATTAAA	-19	NA	40039290	40065705	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40039449_40045960_40046070_40064295_40064602_40065220
transcript_63253.known	chr15	+	879	4	FSM	ENSG00000248508.9	ENST00000668306.2	942	4	60	3	0	0	multi-exon	FALSE	canonical	1	6	junction_2	11.4697670227235	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTGGATTCTCTGTTTCC	40038802	True	NA	NA	False	ATTAAA	-19	NA	40039304	40065705	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40039449_40045960_40046070_40064460_40064602_40065220
transcript_63257.known	chr15	+	568	3	FSM	ENSG00000248508.9	ENST00000660446.2	613	3	45	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	11.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCCTCCTAATTTTTCC	40038802	True	NA	NA	False	TATAAA	-26	NA	40039304	40057003	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40039449_40045960_40046070_40056688
transcript_6326.known	chr1	-	3309	11	FSM	ENSG00000160058.19	ENST00000455895.7	3309	11	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_10	20.630317496345	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCCATCTCTACTAAAAAT	-32390784	True	NA	NA	False	NA	NA	NA	32394441	32364632	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32366655_32368446_32368551_32376261_32376742_32377969_32378049_32378214_32378284_32378723_32378840_32381213_32381269_32383829_32383998_32386778_32386896_32394079_32394141_32394403
transcript_63261.known	chr15	-	4692	5	FSM	ENSG00000104081.14	ENST00000354670.9	4692	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	10.8714074525794	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCTTTTATTTTTCAA	-40107852	True	NA	0	True	AATAAA	-16	NA	40108879	40087889	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_40091889_40104179_40104341_40105794_40106092_40108258_40108387_40108772
transcript_63264.known	chr15	-	630	4	FSM	ENSG00000104081.14	ENST00000559701.5	630	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	7.48331477354788	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGGTGGGCTGCCCTCT	-40107852	True	NA	NA	False	NA	NA	NA	40108879	40091790	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_40091889_40105794_40106092_40108258_40108387_40108772
transcript_6327.known	chr1	-	1505	11	FSM	ENSG00000160058.19	ENST00000446293.6	1505	11	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_8	56.8190989016897	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCCTCTTGGGCCTCTGCT	-32390773	True	NA	NA	False	NA	NA	NA	32394430	32366476	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32366655_32368446_32368551_32376261_32376742_32377969_32378049_32378214_32378284_32378723_32378840_32381213_32381269_32383829_32384049_32386778_32386896_32394079_32394141_32394403
transcript_63273.known	chr15	+	3669	23	FSM	ENSG00000156970.13	ENST00000287598.11	3669	23	0	0	0	0	multi-exon	FALSE	canonical	3	655	junction_5	71.8729509230014	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGCTTCTAACATGTCA	40139772	True	NA	15	True	AATAAA	-16	NA	40161068	40221123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40161256_40165052_40165197_40170061_40170122_40170536_40170682_40176476_40176674_40183713_40183884_40185164_40185380_40185550_40185643_40196544_40196775_40199614_40199728_40200243_40200360_40200930_40200981_40202404_40202466_40202588_40202695_40206183_40206459_40208636_40208771_40209634_40209776_40210109_40210211_40212498_40212649_40213331_40213475_40217495_40217668_40218455_40218563_40220563
transcript_63283.nic	chr15	+	3920	22	NIC	ENSG00000156970.13	novel	3669	23	NA	NA	-34	0	intron_retention	TRUE	canonical	3	655	junction_5	72.2394293124765	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGCTTCTAACATGTCA	40160970	False	NA	15	True	AATAAA	-16	NA	40160988	40221123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_40161256_40165052_40165197_40170061_40170122_40170536_40170682_40176476_40176674_40183713_40183884_40185164_40185643_40196544_40196775_40199614_40199728_40200243_40200360_40200930_40200981_40202404_40202466_40202588_40202695_40206183_40206459_40208636_40208771_40209634_40209776_40210109_40210211_40212498_40212649_40213331_40213475_40217495_40217668_40218455_40218563_40220563
transcript_63298.known	chr15	+	4020	11	FSM	ENSG00000137843.12	ENST00000560346.5	4020	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	20.3577994881569	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGGGCTTCCTGTGTCTC	40239368	False	NA	8	True	ATTAAA	-16	NA	40239419	40277485	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40239803_40240598_40240682_40253177_40253290_40264780_40264990_40265841_40266496_40272223_40272722_40272865_40273000_40273345_40273473_40273550_40273677_40274141_40274277_40275926
transcript_63304.nic	chr15	+	3858	10	NIC	ENSG00000137843.12	novel	2540	10	NA	NA	-158	0	intron_retention	FALSE	canonical	3	33	junction_5	8.31479419283098	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGCTTCCTGTGTCTCTG	NA	False	NA	10	True	ATTAAA	-18	NA	40252389	40277487	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_40252692_40253177_40253290_40264780_40264990_40265841_40266496_40272223_40272722_40272865_40273000_40273345_40273473_40273550_40273677_40274141_40274277_40275926
transcript_63309.known	chr15	-	4517	32	FSM	ENSG00000137841.12	ENST00000557821.5	4517	32	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_18	22.3083116804302	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGCTTAAGCCTGGTC	-40307712	False	NA	-10	True	ATTAAA	-17	NA	40307837	40287908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_40288919_40289271_40289359_40290024_40290083_40290576_40290673_40290760_40290838_40291017_40291184_40291264_40291488_40291605_40291651_40291848_40291925_40292063_40292159_40292338_40292444_40292925_40293026_40293559_40293725_40294265_40294421_40294935_40295061_40295200_40295286_40296295_40296393_40296521_40296635_40296757_40296909_40297520_40297606_40297876_40297960_40298222_40298381_40298561_40298709_40298797_40298965_40299127_40299229_40301956_40302033_40302135_40302190_40302269_40302350_40302468_40302610_40303287_40303357_40304000_40304079_40307588
transcript_63311.known	chr15	-	4242	31	FSM	ENSG00000137841.12	ENST00000456256.6	4242	31	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_7	22.0921303233125	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGCCTTGGCCCTGCTT	-40307700	False	NA	NA	False	NA	NA	NA	40307825	40288138	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_40288919_40289271_40289359_40290024_40290083_40290576_40290673_40290760_40290838_40291017_40291184_40291264_40291488_40291848_40291925_40292063_40292159_40292338_40292444_40292925_40293026_40293559_40293725_40294265_40294421_40294935_40295061_40295200_40295286_40296295_40296393_40296521_40296635_40296745_40296909_40297520_40297606_40297876_40297960_40298222_40298381_40298561_40298709_40298797_40298965_40299127_40299229_40301956_40302033_40302135_40302190_40302269_40302350_40302468_40302610_40303287_40303357_40304000_40304079_40307588
transcript_63317.known	chr15	-	1641	6	FSM	ENSG00000137841.12	ENST00000559381.5	1641	6	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	5.42586398650022	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTTAAGCCTGGTCT	-40290972	True	NA	-9	True	ATTAAA	-18	NA	40291329	40287907	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_40288919_40289271_40289359_40290024_40290083_40290576_40290673_40290760_40290838_40291017
transcript_63318.known	chr15	+	3024	1	FSM	ENSG00000259330.3	ENST00000638170.2	3024	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTAAGTTGATCATT	40323196	True	NA	24	True	AATACA	-20	NA	40323691	40326715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40323700_40326700
transcript_63324.known	chr15	+	1899	9	FSM	ENSG00000128944.14	ENST00000416151.6	1899	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	160.069467341526	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACCTACATGAAACAATAC	NA	False	NA	19	True	AATAAA	-26	NA	40382720	40394154	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40383045_40383227_40383323_40386361_40386495_40387158_40387207_40389505_40389612_40389835_40389930_40391492_40391555_40391948_40392024_40393192
transcript_63325.known	chr15	+	1388	9	FSM	ENSG00000128944.14	ENST00000561169.5	1388	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	162.536870817055	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATGAAACAATACACCTTG	40376044	True	NA	25	True	AATAAA	-32	NA	40382978	40394160	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40383045_40383227_40383323_40386361_40386495_40387158_40387207_40389488_40389612_40389835_40389930_40391492_40391555_40391948_40392024_40393468
transcript_63327.known	chr15	+	1598	9	FSM	ENSG00000128944.14	ENST00000560981.5	1598	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	155.097096604031	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTTGGATCTTTTAATC	NA	False	NA	37	True	AATAAA	-44	NA	40382720	40394172	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40383045_40383227_40383323_40386404_40386495_40387158_40387207_40389505_40389612_40389835_40389930_40391492_40391555_40391948_40392024_40393468
transcript_63329.known	chr15	+	1464	8	FSM	ENSG00000128944.14	ENST00000448395.6	1464	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	163.143607704053	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTTGGATCTTTTAATC	NA	False	NA	37	True	AATAAA	-44	NA	40382835	40394172	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40383045_40383227_40383323_40386361_40386495_40387158_40387207_40389505_40389612_40389835_40389930_40391948_40392024_40393468
transcript_63334.known	chr15	+	665	3	FSM	ENSG00000128944.14	ENST00000559591.5	665	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	228.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTAGTCAATGAAGAGTG	40376006	True	NA	2	True	AATACA	-15	NA	40382940	40384922	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40383045_40383227_40383323_40384456
transcript_63345.known	chr15	+	4350	12	FSM	ENSG00000128928.10	ENST00000487418.8	4350	12	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_7	64.4371690899793	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGCAGCCTGAGTGGTAA	40397959	True	NA	NA	False	AATAAA	-36	NA	40405794	40421308	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40405972_40407635_40407726_40407938_40407991_40410627_40410798_40411259_40411354_40411554_40411692_40412990_40413088_40414888_40414983_40415400_40415483_40416077_40416183_40416289_40416363_40418129
transcript_63359.nic	chr15	+	2105	11	NIC	ENSG00000128928.10	novel	4350	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_7	140.451272689143	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCCCTTGTTTCTTCC	40397959	True	NA	NA	False	AAAACA	-17	NA	40405794	40419157	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_40405972_40407635_40407726_40407938_40407991_40410627_40410798_40411259_40411354_40411554_40411692_40412990_40413088_40415400_40415483_40416077_40416183_40416289_40416363_40418129
transcript_63368.known	chr15	+	4251	11	FSM	ENSG00000128928.10	ENST00000479013.7	4251	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	154.590555985804	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATGAACCATGCAGCCT	40397959	True	NA	NA	False	AATAAA	-27	NA	40405794	40421299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40405972_40407938_40407991_40410627_40410798_40411259_40411354_40411554_40411692_40412990_40413088_40414888_40414983_40415400_40415483_40416077_40416183_40416289_40416363_40418129
transcript_63389.known	chr15	+	4665	12	FSM	ENSG00000128928.10	ENST00000651168.1	4665	12	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_7	64.4371690899793	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCTGAGTGGTAAATGGA	NA	False	NA	NA	False	AATAAA	-41	NA	40405484	40421313	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40405972_40407635_40407726_40407938_40407991_40410627_40410798_40411259_40411354_40411554_40411692_40412990_40413088_40414888_40414983_40415400_40415483_40416077_40416183_40416289_40416363_40418129
transcript_63391.nic	chr15	+	4722	7	NIC	ENSG00000140320.12	novel	4698	7	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	27.8053751797901	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTTTCCTGTGTGTCCTGT	40439670	False	NA	27	True	AATAAA	-31	NA	40439706	40468236	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_40439966_40458450_40459897_40461911_40462295_40463860_40464021_40464470_40464548_40465334_40465436_40465940
transcript_63392.nic	chr15	+	4713	7	NIC	ENSG00000140320.12	novel	4698	7	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	25.5973088863307	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTTTCCTGTGTGTCCTGT	40439670	False	NA	27	True	AATAAA	-31	NA	40439706	40468236	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_40439966_40458450_40459897_40461911_40462295_40463860_40464021_40464470_40464548_40465343_40465436_40465940
transcript_63393.known	chr15	+	4698	7	FSM	ENSG00000140320.12	ENST00000561234.5	4698	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	33.728079300982	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGATCGTTTCCTGTGT	40438068	True	NA	20	True	AATAAA	-24	NA	40439720	40468229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40439966_40458450_40459897_40461914_40462295_40463860_40464021_40464470_40464548_40465334_40465436_40465940
transcript_63394.nic	chr15	+	4710	7	NIC	ENSG00000140320.12	novel	4698	7	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	32.3470761172217	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTTTCCTGTGTGTCCTGT	40439670	False	NA	27	True	AATAAA	-31	NA	40439706	40468236	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_40439966_40458450_40459897_40461914_40462295_40463860_40464021_40464470_40464548_40465343_40465436_40465940
transcript_63395.known	chr15	+	4779	7	FSM	ENSG00000140320.12	ENST00000416165.6	4779	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	26.7669987526099	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTTTCCTGTGTGTCCTGT	40439201	True	NA	27	True	AATAAA	-31	NA	40440952	40468236	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40441269_40458450_40459897_40461911_40462295_40463860_40464021_40464470_40464548_40465334_40465436_40465940
transcript_63398.known	chr15	+	4432	6	FSM	ENSG00000140320.12	ENST00000560846.1	4432	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	22.7947362344906	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGGATCGTTTCCTGTG	NA	False	NA	19	True	AATAAA	-23	NA	40458464	40468228	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40459897_40461911_40462295_40463860_40464021_40464470_40464548_40465343_40465436_40465940
transcript_63399.known	chr15	+	2175	1	FSM	ENSG00000169105.8	ENST00000306243.7	2175	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	217	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGAGCATTTCTGTGATTT	40470508	True	NA	17	True	AATAAA	-17	NA	40470983	40473158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40471000_40473200
transcript_63405.known	chr15	-	1509	4	FSM	ENSG00000128891.16	ENST00000416810.7	1509	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	4.18993502999218	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCAGTGTCTGTGGTGCTG	-40563762	True	NA	-4	True	TATAAA	-17	NA	40565042	40553098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_40554128_40557215_40557373_40562771_40563028_40564975
transcript_63406.known	chr15	-	576	4	FSM	ENSG00000128891.16	ENST00000558113.5	576	4	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	28.5773803324704	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCGGGCCAGGCAGGGATG	-40563731	True	NA	NA	False	NA	NA	NA	40565011	40539228	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_40539356_40557215_40557373_40562771_40563028_40564975
transcript_63407.known	chr15	+	2365	3	FSM	ENSG00000166133.18	ENST00000315616.12	2365	3	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	6	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATGTCTCTGTTTCCCTT	40565776	True	NA	13	True	TATAAA	-21	NA	40569298	40574949	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40569944_40571603_40571901_40573526
transcript_63409.known	chr15	+	1558	3	FSM	ENSG00000166133.18	ENST00000559271.1	1558	3	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_1	94	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGAGGACGGGCTTCTAA	40565809	True	NA	-75	True	NA	NA	NA	40569331	40574358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40569761_40571603_40571901_40573526
transcript_6341.known	chr1	-	1473	10	FSM	ENSG00000160058.19	ENST00000419121.6	1473	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	67.8658808074999	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGGGATAGTTCTAGCC	-32390784	True	NA	NA	False	NA	NA	NA	32394441	32366300	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32366655_32368446_32368551_32376261_32376742_32377969_32378049_32378214_32378284_32378723_32378840_32381213_32381269_32386778_32386896_32394079_32394141_32394403
transcript_63412.known	chr15	+	5923	10	FSM	ENSG00000137812.21	ENST00000533001.1	5923	10	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_9	4.2716406192758	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTTTTATTTTGCCAA	40591610	True	NA	NA	False	NA	NA	NA	40594264	40626042	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40594393_40602914_40602967_40605109_40605150_40606392_40606453_40608846_40608909_40610244_40610298_40611477_40611512_40615340_40615379_40618958_40619012_40620639
transcript_63422.known	chr15	+	2436	10	FSM	ENSG00000051180.17	ENST00000267868.8	2436	10	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_5	33.6301598913979	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTTGCCTTGTGGCCCCC	40691125	True	NA	3	True	AATAAA	-15	NA	40695173	40732340	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40695426_40698756_40698846_40701063_40701202_40706176_40706295_40709024_40709117_40718804_40718900_40728710_40728825_40729504_40729635_40729852_40729975_40731054
transcript_63428.known	chr15	+	1611	9	FSM	ENSG00000051180.17	ENST00000423169.6	1611	9	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_8	94.4202705990615	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGGTCTGCACAGATTC	40695098	False	NA	17	True	AATAAA	-24	NA	40695128	40731592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40695426_40698756_40698846_40701063_40701202_40706176_40706295_40709024_40709117_40718804_40718900_40728710_40728825_40729504_40729635_40731054
transcript_63430.known	chr15	+	1545	9	FSM	ENSG00000051180.17	ENST00000525066.5	1545	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	100.622360213821	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGTAAAATAAAATGCCTCA	40691138	True	NA	-18	True	ACTAAA	-39	NA	40695186	40731557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40695426_40698756_40698846_40701063_40701202_40706176_40706295_40709024_40709117_40728710_40728825_40729504_40729635_40729852_40729975_40731054
transcript_63434.known	chr15	-	1242	4	FSM	ENSG00000245849.8	ENST00000650326.1	1242	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4.24264068711928	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGGTTTTATGGCTCA	-40694079	True	NA	-86	True	AATAAA	-4	NA	40695093	40686242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_40687147_40687798_40687845_40694585_40694796_40695011
transcript_63435.known	chr15	-	1151	2	FSM	ENSG00000245849.8	ENST00000499988.2	1151	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAAGCTGGGCGTGGTG	-40694093	True	NA	NA	False	NA	NA	NA	40695107	40693740	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_40694796_40695011
transcript_63439.known	chr15	-	2246	13	FSM	ENSG00000137824.16	ENST00000338376.8	2246	13	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_12	20.4944098069043	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTCTTTATTCTTACTT	-40752487	True	NA	-17	True	AATAAA	-16	NA	40755254	40735886	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_40736595_40737123_40737205_40737287_40737342_40737627_40737727_40737964_40738043_40738500_40738577_40740132_40740194_40744046_40744150_40744976_40745260_40751425_40751570_40751985_40752179_40754596_40754791_40755082
transcript_6344.known	chr1	-	1630	10	FSM	ENSG00000160058.19	ENST00000373520.8	1630	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	67.0960247943936	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAAAGAAAACAGACAT	-32390771	True	NA	NA	False	AATATA	-39	NA	32394428	32368032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32368551_32376261_32376742_32377969_32378049_32378214_32378284_32378723_32378840_32381213_32381269_32383829_32383940_32386778_32386896_32394079_32394141_32394403
transcript_63440.nic	chr15	-	2129	13	NIC	ENSG00000137824.16	novel	2246	13	NA	NA	0	0	intron_retention	TRUE	canonical	3	27	junction_12	40.8400504679196	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGCTCTTTATTCTTACT	-40752487	True	NA	-18	True	AATAAA	-15	NA	40755254	40735887	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_40736595_40737123_40737205_40737287_40737342_40737627_40737727_40737964_40738043_40738500_40738577_40740132_40740194_40744046_40744150_40744976_40745260_40751425_40751570_40751985_40752179_40754596_40754791_40755198
transcript_63442.nic	chr15	-	1935	4	ISM	ENSG00000137824.16	ENST00000338376.8	2246	13	-17	14324	-17	-6117	5prime_fragment	FALSE	canonical	3	115	junction_3	21.0607586652418	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCTGGGCATGGTGGCAT	-40752504	True	NA	NA	False	AAGAAA	-21	NA	40755271	40750210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_40751570_40751985_40752179_40754596_40754791_40755082
transcript_63447.known	chr15	+	2775	11	FSM	ENSG00000166140.17	ENST00000355341.8	2775	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	30.3922687537472	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGCATCACTTTTGGT	40806810	True	NA	NA	False	TATAAA	-22	NA	40807088	40815084	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40807869_40809118_40809241_40809407_40809459_40809851_40809971_40810070_40810217_40810648_40810758_40812698_40812903_40813337_40813418_40813712_40813812_40813942_40814071_40814147
transcript_6345.nic	chr1	-	1709	10	ISM	ENSG00000160058.19	ENST00000455895.7	3309	11	-8	3400	-8	0	5prime_fragment	FALSE	canonical	3	159	junction_9	21.5944665980506	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAAAGAAAACAGACAT	-32390792	True	NA	NA	False	AATATA	-39	NA	32394449	32368032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_32368551_32376261_32376742_32377969_32378049_32378214_32378284_32378723_32378840_32381213_32381269_32383829_32383998_32386778_32386896_32394079_32394141_32394403
transcript_63452.known	chr15	+	2059	11	FSM	ENSG00000166140.17	ENST00000564258.5	2059	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	30.3922687537472	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCCCAGCATCTCATTTC	40806810	True	NA	23	True	AATAAA	-15	NA	40807088	40814565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40807672_40809118_40809241_40809407_40809459_40809851_40809971_40810070_40810217_40810648_40810758_40812698_40812903_40813337_40813418_40813712_40813812_40813942_40814071_40814147
transcript_63455.known	chr15	-	3721	11	FSM	ENSG00000104129.10	ENST00000220496.9	3721	11	0	0	0	0	multi-exon	TRUE	canonical	3	212	junction_1	12.1692234756372	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAATCACTTTGGGGGGC	-40802711	True	NA	NA	False	AATAAA	-19	NA	40807473	40765160	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_40768063_40773726_40773838_40774355_40774437_40775030_40775109_40775552_40775597_40776195_40776293_40776541_40776628_40779222_40779311_40779544_40779604_40779927_40779998_40807368
transcript_6346.known	chr1	-	4599	10	FSM	ENSG00000160058.19	ENST00000341071.11	4599	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_7	59.359128807956	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTTGTCCTGAACCTTT	-32390769	True	NA	-68	True	ATTAAA	-15	NA	32394426	32365170	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32368551_32376261_32376742_32377969_32378049_32378214_32378284_32378723_32378840_32381213_32381269_32383829_32384049_32386778_32386896_32394079_32394141_32394403
transcript_63460.known	chr15	+	1555	10	FSM	ENSG00000166140.17	ENST00000299173.14	1555	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	33.8442328730529	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGCATCTCATTTCTACA	40807311	False	NA	27	True	AATAAA	-19	NA	40807589	40814569	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40807869_40809118_40809241_40809407_40809459_40809851_40809971_40810070_40810217_40810648_40810758_40813337_40813418_40813712_40813812_40813942_40814071_40814147
transcript_63467.known	chr15	-	903	10	FSM	ENSG00000104129.10	ENST00000560645.5	903	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	76.3832119102646	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGAGGGACAGCCCCAGG	-40802711	True	NA	NA	False	AATGAA	-36	NA	40807473	40773781	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_40773838_40774355_40774437_40775030_40775109_40775552_40775597_40776195_40776293_40776541_40776628_40779083_40779311_40779544_40779604_40779927_40779998_40807368
transcript_63476.known	chr15	-	792	9	FSM	ENSG00000104129.10	ENST00000559310.3	792	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	75.396348552168	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCAGCGGTGAGTGCTGC	-40802695	True	NA	NA	False	NA	NA	NA	40807457	40774364	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_40774437_40775030_40775109_40775552_40775597_40776195_40776402_40776541_40776628_40779222_40779311_40779544_40779604_40779927_40779998_40807368
transcript_63482.known	chr15	+	727	3	FSM	ENSG00000137880.6	ENST00000260447.6	727	3	0	0	0	0	multi-exon	FALSE	canonical	3	537	junction_1	17.5	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCGCCTGTGCTCTGCTT	40757578	True	NA	16	True	AATAAA	-16	NA	40764067	40767708	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40764217_40765826_40765922_40767225
transcript_63483.known	chr15	+	626	3	FSM	ENSG00000137880.6	ENST00000559445.1	626	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	286	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGAGTGGCTGCGCCTGT	40757637	False	NA	7	True	AATAAA	-7	NA	40764126	40767699	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40764217_40765859_40765922_40767225
transcript_63484.known	chr15	+	785	2	FSM	ENSG00000137880.6	ENST00000558467.1	785	2	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCGCCTGTGCTCTGCTT	40765602	False	NA	16	True	AATAAA	-16	NA	40765619	40767708	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40765922_40767225
transcript_63485.known	chr15	+	1486	11	FSM	ENSG00000166140.17	ENST00000561768.5	1486	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	29.8866190794476	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCCCTGGCACTTAGTGG	40806628	True	NA	-21	True	NA	NA	NA	40807767	40814521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40807822_40809118_40809241_40809407_40809459_40809851_40809971_40810070_40810217_40810648_40810758_40812698_40812903_40813337_40813418_40813712_40813812_40813942_40814071_40814147
transcript_63487.known	chr15	+	3056	11	FSM	ENSG00000166145.15	ENST00000344051.8	3056	11	0	0	0	0	multi-exon	TRUE	canonical	3	288	junction_5	201.837781398825	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGTTCGTTTATTCAGTGA	40843936	False	NA	NA	False	NA	NA	NA	40844017	40858207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40844187_40844489_40845030_40853123_40853252_40853488_40853628_40853710_40853930_40854059_40854087_40854396_40854523_40854638_40854690_40855891_40856063_40856275_40856324_40856769
transcript_63493.nic	chr15	+	2468	11	NIC	ENSG00000166145.15	novel	2978	11	NA	NA	31	532	combination_of_known_junctions	FALSE	canonical	3	179	junction_1	214.269666541954	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTGGCTCTGTTCTGTG	40843972	False	NA	12	True	AATAAA	-14	NA	40844097	40857655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_40844279_40844489_40845030_40853123_40853252_40853488_40853628_40853710_40853882_40854059_40854087_40854396_40854523_40854638_40854690_40855891_40856063_40856275_40856324_40856769
transcript_63494.nic	chr15	+	2458	11	NIC	ENSG00000166145.15	novel	3056	11	NA	NA	-21	532	combination_of_known_junctions	FALSE	canonical	3	179	junction_1	252.746038544623	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTGGCTCTGTTCTGTG	40843120	True	NA	12	True	AATAAA	-14	NA	40844155	40857655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_40844279_40844489_40845030_40853123_40853252_40853488_40853628_40853710_40853930_40854059_40854087_40854396_40854523_40854638_40854690_40855891_40856063_40856275_40856324_40856769
transcript_63505.nic	chr15	+	2600	10	NIC	ENSG00000166145.15	novel	2978	11	NA	NA	0	532	intron_retention	FALSE	canonical	3	575	junction_4	97.4485619299855	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTGGCTCTGTTCTGTG	40843141	False	NA	12	True	AATAAA	-14	NA	40844176	40857655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_40845030_40853123_40853252_40853488_40853628_40853710_40853882_40854059_40854087_40854396_40854523_40854638_40854690_40855891_40856063_40856275_40856324_40856769
transcript_63506.nic	chr15	+	2648	10	NIC	ENSG00000166145.15	novel	3056	11	NA	NA	0	532	intron_retention	FALSE	canonical	3	288	junction_4	182.94693287102	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTGGCTCTGTTCTGTG	40843141	False	NA	12	True	AATAAA	-14	NA	40844176	40857655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_40845030_40853123_40853252_40853488_40853628_40853710_40853930_40854059_40854087_40854396_40854523_40854638_40854690_40855891_40856063_40856275_40856324_40856769
transcript_63518.known	chr15	-	643	3	FSM	ENSG00000261183.6	ENST00000564302.5	643	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	67	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGGAATGCATTCACTG	-40842347	True	NA	0	True	AATAAA	-24	NA	40844387	40835992	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_40836283_40838542_40838687_40844178
transcript_63519.known	chr15	-	629	2	FSM	ENSG00000261183.6	ENST00000565315.1	629	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTTACAAAAATGTTCAGC	-40842292	True	NA	NA	False	TATAAA	-38	NA	40844332	40835807	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_40836283_40844178
transcript_63520.known	chr15	-	470	2	FSM	ENSG00000261183.6	ENST00000568525.2	579	2	109	0	-16	0	multi-exon	FALSE	canonical	3	164	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAAAAGCCCACTAATTC	-40842260	True	NA	61	True	AATAAA	-19	NA	40844300	40838338	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_40838687_40844178
transcript_63522.known	chr15	+	2978	11	FSM	ENSG00000166145.15	ENST00000562057.6	2978	11	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_1	145.689258354897	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGTTCGTTTATTCAGTGA	40841683	True	NA	NA	False	NA	NA	NA	40844047	40858207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40844187_40844489_40845030_40853123_40853252_40853488_40853628_40853710_40853882_40854059_40854087_40854396_40854523_40854638_40854690_40855891_40856063_40856275_40856324_40856769
transcript_63523.known	chr15	-	1650	3	FSM	ENSG00000104140.7	ENST00000220507.5	1650	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	2	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGTGCGTTGTCTCTGTCA	-40873793	True	NA	-4	True	AATAAA	-17	NA	40874234	40872213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_40873502_40873683_40873743_40873931
transcript_63532.known	chr15	+	3875	5	FSM	ENSG00000104142.11	ENST00000220509.10	3875	5	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_3	11.5839328382031	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGGCTTTGTGTCGATG	40891802	True	NA	15	True	ATTAAA	-15	NA	40894449	40903975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40894860_40895937_40896080_40898906_40898999_40899143_40901015_40902615
transcript_63536.known	chr15	+	873	4	FSM	ENSG00000104142.11	ENST00000558474.1	873	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	69.9634825383134	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATCCAGGAGCTGCAGCG	40891819	True	NA	NA	False	NA	NA	NA	40894466	40902861	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40894860_40895937_40896080_40898906_40898999_40902615
transcript_63541.known	chr15	+	1520	3	FSM	ENSG00000128965.13	ENST00000617768.5	1520	3	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	2.5	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCTGTGCCGGAATGT	40951379	True	NA	12	True	CATAAA	-13	NA	40953470	40956512	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_40953815_40954227_40954264_40955372
transcript_63543.known	chr15	-	5991	37	FSM	ENSG00000128908.18	ENST00000401393.7	5991	37	0	0	0	0	multi-exon	FALSE	non_canonical	2	11	junction_1	15.7553390911317	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTATGTAAATTGAGGT	-41114584	True	NA	-13	True	AATAAA	-13	NA	41116153	40978892	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_40979258_40979491_40980441_40982861_40983078_40983761_40983922_40984196_40984353_40985337_40985427_40987090_40987194_40987815_40987975_40997528_40997602_41005592_41005688_41016087_41016216_41020899_41021126_41027595_41027737_41044903_41045076_41047407_41047502_41048211_41048277_41049286_41049421_41049934_41050103_41053928_41054015_41055246_41055365_41056621_41056707_41058638_41058782_41059866_41059927_41069569_41069666_41070466_41070548_41071848_41072059_41073427_41073496_41074369_41074566_41079700_41079905_41081019_41081074_41085368_41085584_41087561_41087683_41092026_41092183_41095600_41095669_41095758_41095929_41096167_41096354_41115972
transcript_63544.known	chr15	-	6365	36	FSM	ENSG00000128908.18	ENST00000648947.1	6365	36	0	0	0	0	multi-exon	TRUE	canonical	3	61	junction_32	10.8105768314448	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGGTGTCTGTGGTCTTT	-41116213	False	NA	0	True	AATAAA	-26	NA	41116280	40978879	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_40980441_40982861_40983078_40983761_40983922_40984196_40984353_40985337_40985427_40987090_40987194_40987815_40987975_40997528_40997602_41005592_41005688_41016087_41016216_41020899_41021126_41027595_41027737_41044903_41045076_41047407_41047502_41048211_41048277_41049286_41049421_41049934_41050103_41053928_41054015_41055246_41055365_41056621_41056707_41058638_41058782_41059866_41059927_41069569_41069666_41070466_41070548_41071848_41072059_41073427_41073496_41074369_41074566_41079700_41079905_41081019_41081074_41085368_41085584_41087561_41087683_41092026_41092183_41095600_41095669_41095758_41095929_41096167_41096354_41115972
transcript_63547.nic	chr15	-	4225	32	ISM	ENSG00000128908.18	ENST00000648947.1	6365	36	36	6469	36	0	5prime_fragment	FALSE	canonical	3	61	junction_28	10.0576899928202	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCAGAGAAGGTATTTCCA	-41114675	True	NA	-11	True	NA	NA	NA	41116244	40985348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_40985427_40987090_40987194_40987815_40987975_40997528_40997602_41005592_41005688_41016087_41016216_41020899_41021126_41027595_41027737_41044903_41045076_41047407_41047502_41048211_41048277_41049286_41049421_41049934_41050103_41053928_41054015_41055246_41055365_41056621_41056707_41058638_41058782_41059866_41059927_41069569_41069666_41070466_41070548_41071848_41072059_41073427_41073496_41074369_41074566_41079700_41079905_41081019_41081074_41085368_41085584_41087561_41087683_41092026_41092183_41095600_41095669_41095758_41095929_41096167_41096354_41115972
transcript_6355.known	chr1	+	12831	4	FSM	ENSG00000273274.2	ENST00000609129.2	12831	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	12.675435561221	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGATTTCTCCTTTCAGTT	32464036	True	NA	10	True	AATAAA	-20	NA	32465071	32496686	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32465106_32470583_32471616_32480890_32481070_32485100
transcript_63551.known	chr15	+	3201	7	FSM	ENSG00000187446.12	ENST00000334660.10	3201	7	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_4	8.05536398239638	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTTTGTCCATTTTACA	41225541	True	NA	NA	False	AATAAA	-21	NA	41231267	41281887	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_41231450_41243666_41243740_41256909_41256991_41262755_41262884_41270556_41270619_41278766_41278890_41279335
transcript_63558.nnic	chr15	+	1511	5	NNC	ENSG00000247556.6	novel	473	5	NA	NA	-28	843	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	303.604491896941	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGAACAGAGTATTGGAA	41259259	True	NA	14	True	AATAAA	-23	NA	41283961	41299624	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_+_41284111_41285224_41285364_41286010_41286101_41298040_41298788_41299238
transcript_63559.nnic	chr15	+	3886	5	NNC	ENSG00000247556.6	novel	473	5	NA	NA	-28	3218	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	303.604491896941	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAAAAGGTAGTGAATACA	41259259	True	NA	NA	False	NA	NA	NA	41283961	41301999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_+_41284111_41285224_41285364_41286010_41286101_41298040_41298788_41299238
transcript_63560.known	chr15	+	1384	5	FSM	ENSG00000247556.6	ENST00000501665.2	1384	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	355.502812928393	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTTGGTACAGGATCAG	41259329	True	NA	NA	False	AATAAA	-18	NA	41284031	41309737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_41284111_41285224_41285364_41286010_41286101_41308566_41308625_41308719
transcript_63562.known	chr15	-	1201	5	FSM	ENSG00000104147.9	ENST00000220514.8	1201	5	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_2	30.1081384346492	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATTTGTCTTTTTCAGT	-41328195	True	NA	NA	False	AATAAA	-15	NA	41332591	41309272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_41309850_41313272_41313355_41319657_41319781_41331914_41331982_41332239
transcript_63566.known	chr15	+	642	4	FSM	ENSG00000247556.6	ENST00000559368.5	642	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	345.071973168884	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAAATAGGCTTCATACC	41259305	True	NA	NA	False	NA	NA	NA	41284007	41288271	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_41284111_41285224_41285364_41286010_41286101_41287961
transcript_63567.known	chr15	+	1482	4	FSM	ENSG00000247556.6	ENST00000557993.5	1482	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	336.11539023906	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCTTTGTATGTATATGT	41259328	True	NA	16	True	AATAAA	-18	NA	41284030	41289155	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_41284111_41285224_41285364_41286010_41286101_41287982
transcript_63568.known	chr15	+	8829	4	FSM	ENSG00000247556.6	ENST00000500949.6	8829	4	0	0	0	0	multi-exon	FALSE	canonical	3	607	junction_3	59.4194132137525	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCATTGTGTGTCGTTACT	41259302	True	NA	15	True	AATAAA	-28	NA	41284004	41306534	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_41284111_41285224_41285364_41286010_41286101_41298040
transcript_63575.known	chr15	+	1301	9	FSM	ENSG00000137804.14	ENST00000450592.6	1301	9	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	723.992910445261	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCACTTTAGTCACGAGAT	41318859	True	NA	NA	False	NA	NA	NA	41332870	41380263	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_41333051_41349097_41349242_41350987_41351130_41356038_41356141_41358148_41358259_41365404_41365590_41371526_41371685_41377195_41377305_41380092
transcript_63576.known	chr15	-	485	4	FSM	ENSG00000104147.9	ENST00000560640.1	485	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	215.264178781948	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTGATCCTGTACCAAA	-41332477	False	NA	NA	False	AATGAA	-39	NA	41332487	41309761	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_41309850_41313272_41313355_41331914_41331982_41332239
transcript_63578.known	chr15	+	676	3	FSM	ENSG00000247556.6	ENST00000558457.5	676	3	0	0	0	0	multi-exon	FALSE	canonical	3	731	junction_1	2	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCGAGGTGGGCAGATAC	41259287	True	NA	NA	False	NA	NA	NA	41283989	41286426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_41284111_41285224_41285364_41286010
transcript_63580.known	chr15	+	566	2	FSM	ENSG00000247556.6	ENST00000560545.1	566	2	0	0	0	0	multi-exon	FALSE	canonical	3	731	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCTTAAGTAGGGGTCCA	41259307	True	NA	NA	False	NA	NA	NA	41284009	41285689	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_41284111_41285224
transcript_63582.known	chr15	+	2409	11	FSM	ENSG00000137804.14	ENST00000260359.10	2409	11	0	0	0	0	multi-exon	FALSE	canonical	3	649	junction_3	447.5461987326	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATTCTTTGTAAACATAA	NA	False	NA	21	True	AATAAA	-22	NA	41332693	41381050	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_41333051_41342385_41342455_41349097_41349242_41351032_41351130_41356038_41356141_41358148_41358259_41365401_41365590_41371526_41371685_41375711_41375829_41377195_41377305_41380092
transcript_63583.known	chr15	+	546	5	FSM	ENSG00000137804.14	ENST00000558582.5	546	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	821.15052670019	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGGAGTTGCAATGGTAC	41318871	True	NA	NA	False	NA	NA	NA	41332882	41351986	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_41333051_41342385_41342455_41349097_41349242_41350987_41351130_41351963
transcript_63584.known	chr15	+	821	4	FSM	ENSG00000247556.6	ENST00000561275.5	821	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	338.943784260589	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTAGCCGGGTGTGGT	41259303	True	NA	NA	False	ACTAAA	-6	NA	41284005	41297290	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_41284111_41285224_41285364_41286010_41286101_41296803
transcript_63585.known	chr15	+	2256	11	FSM	ENSG00000137804.14	ENST00000560747.5	2256	11	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_3	561.82278344688	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATTCTTTGTAAACATAA	41318874	True	NA	21	True	AATAAA	-22	NA	41332885	41381050	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_41333051_41342385_41342455_41349097_41349242_41350990_41351130_41356038_41356141_41358148_41358259_41365404_41365590_41371526_41371685_41375711_41375829_41377195_41377305_41380092
transcript_63586.known	chr15	+	2232	11	FSM	ENSG00000137804.14	ENST00000560177.5	2232	11	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_3	570.235600431962	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATTCTTTGTAAACATAA	41318901	True	NA	21	True	AATAAA	-22	NA	41332912	41381050	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_41333051_41342385_41342455_41349097_41349242_41350990_41351130_41356038_41356141_41358148_41358259_41365401_41365590_41371526_41371685_41375711_41375829_41377195_41377305_41380092
transcript_63587.known	chr15	+	5021	18	FSM	ENSG00000137815.15	ENST00000389629.9	5030	18	9	0	9	0	multi-exon	FALSE	canonical	1	192	junction_16	95.4835807186304	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATTGAGTCTAAGGATT	41412662	True	NA	NA	False	AATAAA	-25	NA	41417103	41483563	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_41417314_41438320_41438432_41452900_41453049_41457671_41457877_41464770_41464886_41466140_41466253_41470256_41470393_41471171_41471350_41474619_41474703_41475524_41475613_41475711_41475820_41476445_41476524_41477164_41477287_41477457_41477516_41478547_41478626_41479102_41479199_41480213_41480326_41480580
transcript_63591.nic	chr15	+	743	5	ISM	ENSG00000137815.15	ENST00000389629.9	5030	18	31	18702	-6	11867	5prime_fragment	FALSE	canonical	3	542	junction_4	32.2722791262099	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGACACAGATTCAAGAATC	41412684	True	NA	NA	False	AAAAAG	-28	NA	41417125	41464861	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_41417314_41438320_41438432_41452900_41453049_41457671_41457877_41464770
transcript_63592.known	chr15	-	1509	5	FSM	ENSG00000137806.10	ENST00000260361.9	1509	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_4	42.0260335982353	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATGGCTAGTATGTATTC	-41401351	True	NA	-2	True	AATAAA	-23	NA	41402496	41387352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_41387594_41388447_41388523_41394858_41395045_41396486_41397141_41402143
transcript_63594.known	chr15	-	1364	5	FSM	ENSG00000137806.10	ENST00000560978.2	1364	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_4	42.0260335982353	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATTCTCCTGCCTCAGCT	NA	False	NA	NA	False	NA	NA	NA	41402519	41387217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_41387594_41388447_41388523_41394858_41395045_41396486_41397141_41402446
transcript_63595.nic	chr15	+	704	4	ISM	ENSG00000137815.15	ENST00000389629.9	5030	18	-21	25687	-21	4882	5prime_fragment	FALSE	canonical	3	582	junction_2	20.1714870272097	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGGTTGTCCTCGTCGTT	NA	False	NA	24	True	NA	NA	NA	41417073	41457876	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_41417314_41438320_41438432_41452900_41453049_41457671
transcript_63596.known	chr15	-	1469	4	FSM	ENSG00000137806.10	ENST00000679240.1	1469	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	66.1261420821347	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	-41401315	True	NA	NA	False	NA	NA	NA	41402460	41394046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_41394359_41394858_41395045_41396486_41397141_41402143
transcript_63597.nic	chr15	+	393	3	ISM	ENSG00000137815.15	ENST00000389629.9	5030	18	-21	30621	-21	0	5prime_fragment	FALSE	canonical	3	582	junction_2	24.5	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAATAGAGAAGAAAGG	NA	False	NA	NA	False	AATAAA	-22	NA	41417073	41452942	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_41417314_41438320_41438432_41452900
transcript_63600.nic	chr15	+	297	2	ISM	ENSG00000137815.15	ENST00000462276.1	485	4	-4	14563	-4	-14511	5prime_fragment	FALSE	canonical	3	631	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGTGTGGAGGGCCTCGG	41412686	True	NA	NA	False	NA	NA	NA	41417127	41438431	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_41417314_41438320
transcript_63610.nnic	chr15	-	4620	25	NNC	ENSG00000103932.12	novel	4663	25	NA	NA	-3	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	66.2152293450851	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATCTGGACTGATTTCA	-41536903	True	NA	-4	True	AATAAA	-21	NA	41544272	41517175	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_-_41517692_41517797_41517858_41518005_41518183_41520390_41521148_41521737_41521881_41522097_41522193_41522764_41522961_41523244_41523355_41523770_41523973_41524095_41524255_41524990_41525149_41526897_41527069_41527166_41527302_41527422_41527606_41527859_41528028_41528234_41528337_41529469_41529569_41529863_41529980_41531022_41531203_41534713_41534936_41535511_41535633_41536128_41536219_41536500_41536650_41536944_41537202_41544218
transcript_63623.known	chr15	-	4663	25	FSM	ENSG00000103932.12	ENST00000304330.9	4663	25	0	0	0	0	multi-exon	TRUE	canonical	3	180	junction_24	34.9132854369221	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATCTGGACTGATTTCA	-41536888	True	NA	-4	True	AATAAA	-21	NA	41544257	41517175	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_41517692_41517797_41517858_41518005_41518183_41520390_41521148_41521737_41521881_41522097_41522251_41522764_41522961_41523244_41523355_41523770_41523973_41524095_41524255_41524990_41525149_41526897_41527069_41527166_41527302_41527422_41527606_41527859_41528028_41528234_41528337_41529469_41529569_41529863_41529980_41531022_41531203_41534713_41534936_41535511_41535633_41536128_41536219_41536500_41536650_41536944_41537202_41544218
transcript_6369.known	chr1	-	1567	7	FSM	ENSG00000176261.16	ENST00000468695.6	1567	7	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_3	168.835883495054	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTATTGTTGTTTTTG	-32638473	True	NA	-3	True	AATAAA	-19	NA	32650550	32620819	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32621949_32627507_32627545_32631826_32631880_32633644_32633728_32633950_32634073_32634767_32634793_32650432
transcript_6371.known	chr1	-	588	7	FSM	ENSG00000176261.16	ENST00000476493.6	588	7	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_6	320.050733825471	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTACGAAGAACTGTTTTTG	-32638473	True	NA	-17	True	AATAAA	-6	NA	32650550	32621840	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32621949_32627507_32627545_32631826_32631880_32633644_32633728_32633950_32634111_32634767_32634793_32650428
transcript_63719.known	chr15	+	332	2	FSM	ENSG00000259838.1	ENST00000566760.1	332	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATTATAATAAACT	NA	False	NA	NA	False	NA	NA	NA	41557026	41557435	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_41557169_41557245
transcript_6373.known	chr1	-	598	7	FSM	ENSG00000176261.16	ENST00000373501.6	598	7	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_5	276.755457639652	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTTGTTTTCCTCTTC	-32638448	True	NA	-6	True	AATAAA	-17	NA	32650525	32621829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32621949_32627507_32627545_32631826_32631880_32633644_32633728_32633950_32634073_32634701_32634793_32650432
transcript_63730.known	chr15	+	8032	19	FSM	ENSG00000092445.12	ENST00000263798.8	8032	19	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_4	29.311018448173	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGTGGTACATTTTTTT	41557312	True	NA	6	True	TATAAA	-20	NA	41559211	41583589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_41559382_41561126_41561311_41561538_41561640_41562547_41562719_41564183_41564271_41565025_41565142_41567359_41567538_41568216_41568363_41568877_41569023_41570026_41570157_41570239_41570341_41570603_41570700_41571037_41571119_41571594_41571688_41572442_41572565_41573001_41573112_41573307_41573468_41573678_41573816_41577885
transcript_63732.nnic	chr15	+	4129	19	NNC	ENSG00000092445.12	novel	8032	19	NA	NA	-397	-7	at_least_one_novel_splicesite	TRUE	canonical	3	36	junction_7	68.2689172444415	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTAAGGTTTTGTCTCTT	41558424	True	NA	NA	False	AATAAA	-14	NA	41558814	41579331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_+_41559382_41561126_41561311_41561538_41561640_41562547_41562719_41564183_41564271_41565025_41565142_41567359_41567538_41568258_41568363_41568877_41569023_41570026_41570157_41570239_41570341_41570603_41570700_41571037_41571119_41571594_41571688_41572442_41572565_41573001_41573112_41573307_41573468_41573678_41573816_41577885
transcript_63751.nic	chr15	+	1511	3	ISM	ENSG00000092445.12	ENST00000263798.8	8032	19	-340	21234	-340	0	5prime_fragment	FALSE	canonical	3	270	junction_1	8	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCCTAAGGAGCCTGAAAAA	41558481	False	NA	NA	False	NA	NA	NA	41558871	41562355	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_41559382_41561126_41561311_41561538
transcript_63752.known	chr15	+	2004	1	FSM	ENSG00000092445.12	ENST00000568490.1	2004	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTGTCTCTTTTTTTTT	41577289	False	NA	NA	False	AATAAA	-21	NA	41577334	41579338	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_41577300_41579300
transcript_63759.known	chr15	+	3525	9	FSM	ENSG00000174197.18	ENST00000566718.6	3525	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.57127865021179	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGAGGAAGGCTGCTC	41621117	False	NA	-94	True	AAGAAA	-37	NA	41621133	41713359	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_41621299_41668827_41669959_41696074_41697024_41698862_41698942_41699063_41699160_41707727_41707860_41708103_41708209_41710690_41711350_41713150
transcript_63760.known	chr15	+	7888	22	FSM	ENSG00000174197.18	ENST00000570161.6	7888	22	0	0	0	0	multi-exon	TRUE	canonical	3	3	junction_1	13.9704904414485	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CACAAAAAAGAAAAAAGAAG	41621314	False	NA	NA	False	AAAACA	-15	NA	41621491	41762194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_41621590_41668827_41669959_41696074_41697024_41698862_41698942_41699063_41699160_41707727_41707860_41708103_41708209_41710690_41711350_41713150_41713497_41727179_41727407_41729163_41729350_41734521_41734595_41736180_41736699_41739905_41740204_41742545_41743173_41748636_41748928_41749110_41750616_41754436_41754568_41757787_41757840_41760322_41760530_41761738_41761851_41762128
transcript_63762.nic	chr15	+	3636	9	ISM	ENSG00000174197.18	ENST00000219905.13	12046	24	-41	56467	-33	114	5prime_fragment	FALSE	canonical	3	21	junction_1	3.80788655293195	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGAAAGAAGCTAGAAT	41660313	False	NA	20	True	NA	NA	NA	41660363	41713473	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_41660526_41668827_41669959_41696074_41697024_41698862_41698942_41699063_41699160_41707727_41707860_41708103_41708209_41710690_41711350_41713150
transcript_63765.nnic	chr15	+	2457	8	NIC	ENSG00000174197.18	novel	14568	23	NA	NA	7	114	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	9.11379309013519	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGAAAGAAGCTAGAAT	41658113	True	NA	20	True	NA	NA	NA	41660411	41713473	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_41660526_41696074_41697024_41698862_41698942_41699063_41699160_41707727_41707860_41708103_41708209_41710690_41711350_41713150
transcript_63768.known	chr15	+	1717	3	FSM	ENSG00000174197.18	ENST00000682463.1	1717	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	10.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTTGACTGTTATGAAT	41658168	True	NA	NA	False	CATAAA	-45	NA	41660466	41675067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_41660526_41668827_41669959_41674540
transcript_63769.known	chr15	+	7182	31	FSM	ENSG00000137802.14	ENST00000457542.7	7182	31	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	4.08805849055786	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGATGCCGGCCAGTG	41774021	True	NA	6	True	AATAAA	-17	NA	41774483	41827855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_41774611_41775166_41775390_41799822_41799915_41810882_41810946_41811177_41811236_41811956_41812128_41812515_41812654_41812918_41813102_41813620_41813782_41814549_41814740_41815258_41815406_41815623_41815800_41816558_41816651_41816909_41817036_41817387_41817459_41817613_41817736_41818008_41818085_41818193_41818306_41818518_41818583_41818822_41818958_41819245_41819380_41819594_41819651_41820831_41821069_41821583_41821751_41821964_41822111_41822224_41822423_41822592_41822678_41822938_41823223_41823446_41824062_41824483_41824570_41825208
transcript_63790.known	chr15	+	3331	25	FSM	ENSG00000168970.22	ENST00000382448.8	3331	25	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_6	33.8959805876744	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGGCGCTGAGACCATC	41825884	True	NA	19	True	NA	NA	NA	41828115	41848143	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_41828189_41834739_41834894_41834969_41835224_41835587_41835645_41836147_41836244_41836474_41836552_41840157_41840231_41840523_41840661_41840773_41840906_41841054_41841096_41841230_41841274_41841516_41841572_41841818_41841950_41842192_41842277_41842553_41842592_41843675_41843812_41844470_41844608_41844847_41845071_41845202_41845321_41845637_41845776_41845942_41846048_41846202_41846383_41846668_41846836_41847336_41847524_41847648
transcript_6380.known	chr1	-	514	6	FSM	ENSG00000176261.16	ENST00000436661.6	514	6	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_2	215.140326298907	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTTGTTTTCCTCTTC	-32638483	True	NA	-6	True	AATAAA	-17	NA	32650560	32621829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32621949_32627507_32627545_32633644_32633728_32633950_32634073_32634767_32634793_32650432
transcript_63802.known	chr15	+	1409	8	FSM	ENSG00000243789.11	ENST00000397299.9	1409	8	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	26.6664965980971	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTATGTCCTTTTTTTTT	41825860	True	NA	15	True	AATAAA	-13	NA	41828091	41837581	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_41828189_41834739_41834894_41834969_41835224_41835587_41835645_41836147_41836244_41836474_41836552_41836780_41836941_41837067
transcript_63805.known	chr15	+	1192	7	FSM	ENSG00000243789.11	ENST00000408047.5	1192	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	55.876848714134	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGTCCTGTCAGTAAAG	41825870	True	NA	NA	False	NA	NA	NA	41828101	41837452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_41828189_41834893_41835224_41835587_41835645_41836147_41836244_41836474_41836552_41836780_41836941_41837067
transcript_63810.known	chr15	-	6401	6	FSM	ENSG00000103966.11	ENST00000220325.9	6401	6	0	0	0	0	multi-exon	TRUE	canonical	3	413	junction_1	26.5887194125629	1498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCACTTGAGATTTTAGT	-41964209	True	NA	NA	False	AATAAA	-30	NA	41972557	41895932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_41901182_41909698_41909864_41919209_41919623_41943066_41943165_41953763_41953941_41972258
transcript_63814.known	chr15	-	2032	3	FSM	ENSG00000103966.11	ENST00000569223.1	2032	3	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_1	8.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAACAAAAAAAAAA	-41964204	True	NA	NA	False	NA	NA	NA	41972552	41941603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_41943165_41953763_41953941_41972258
transcript_6382.known	chr1	-	548	6	FSM	ENSG00000176261.16	ENST00000465588.2	548	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_5	318.795608501748	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAAAAAATAAAAGACTCCT	-32638448	True	NA	-34	True	AATGAA	-41	NA	32650525	32621857	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32621949_32627507_32627545_32631826_32631880_32633644_32633728_32633950_32634111_32650401
transcript_63820.known	chr15	-	4832	25	FSM	ENSG00000166887.16	ENST00000318006.10	4832	25	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_15	22.7516788147356	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTCTCTTATTTCTCC	-42202881	True	NA	NA	False	AATAAA	-27	NA	42208304	42158700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_42160830_42161681_42161774_42162031_42162167_42162331_42162482_42163349_42163396_42163625_42163729_42164357_42164487_42164995_42165114_42165717_42165817_42166158_42166233_42166562_42166650_42166771_42166914_42167393_42167538_42169723_42169867_42173722_42173853_42178217_42178339_42178449_42178571_42184516_42184701_42187270_42187364_42187757_42187857_42189113_42189209_42191124_42191168_42191495_42191561_42199895_42199962_42208080
transcript_63833.known	chr15	+	7781	24	FSM	ENSG00000214013.10	ENST00000318010.13	5553	24	1041	-3269	0	3269	multi-exon	FALSE	canonical	2	11	junction_14	12.0352349751624	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGAGAGAATGTTTTAT	42274227	False	NA	8	True	AATAAA	-20	NA	42274241	42356935	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_42274511_42276347_42276411_42278481_42278591_42287690_42287819_42292734_42292918_42297610_42297657_42306545_42306613_42308221_42308319_42310282_42310464_42310692_42310847_42321784_42322021_42326297_42326425_42327362_42327443_42329305_42329450_42330575_42330673_42338388_42338491_42339668_42339913_42340689_42340755_42343077_42343155_42345757_42345833_42348102_42348217_42349382_42349496_42351328_42351433_42352029
transcript_63837.known	chr15	-	10396	22	FSM	ENSG00000103994.18	ENST00000564754.7	10396	22	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_18	28.2682325326778	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTTTACTTTCGTTACCTT	-42482847	True	NA	-6	True	AATAAA	-18	NA	42491141	42412822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_42417361_42417804_42417952_42421060_42421133_42421916_42421989_42422500_42422621_42423997_42424061_42424833_42425026_42428017_42428135_42435383_42435519_42437231_42437378_42438611_42438668_42439032_42439814_42442072_42442415_42444201_42444263_42444826_42444982_42446588_42446659_42448071_42448706_42449770_42451955_42456957_42457159_42466052_42466115_42472235_42472322_42490979
transcript_63839.known	chr15	-	2964	20	FSM	ENSG00000103978.16	ENST00000389834.9	2964	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	61.9418009392777	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGATTGTCTTATTTTC	-42269549	True	NA	NA	False	NA	NA	NA	42273433	42210446	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_42211750_42217802_42217834_42218322_42218379_42219580_42219643_42220061_42220136_42226805_42226910_42227710_42227770_42228711_42228821_42231191_42231261_42233212_42233307_42236319_42236420_42237431_42237616_42239669_42239732_42244049_42244168_42260957_42261003_42261195_42261250_42264089_42264204_42267946_42268033_42272062_42272124_42273254
transcript_63842.nic	chr15	-	2327	20	NIC	ENSG00000103978.16	novel	2964	20	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	81.6694574305983	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAACTGTTACAGTATGA	-42273105	False	NA	NA	False	AAGAAA	-11	NA	42273122	42211138	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_42211750_42217802_42217834_42218322_42218379_42219580_42219643_42220061_42220136_42226805_42226910_42227710_42227770_42228711_42228821_42231191_42231261_42233212_42233307_42236319_42236420_42237431_42237616_42239669_42239732_42244049_42244168_42260957_42261003_42261195_42261250_42264089_42264204_42267946_42268033_42272062_42272124_42272888
transcript_63845.nic	chr15	-	2311	20	NIC	ENSG00000103978.16	novel	2964	20	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	80.5261093908604	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAACTGTTACAGTATGA	-42269585	True	NA	NA	False	AAGAAA	-11	NA	42273469	42211138	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_42211750_42217802_42217834_42218322_42218379_42219580_42219643_42220061_42220136_42226805_42226910_42227710_42227770_42228711_42228821_42231843_42231916_42233212_42233307_42236319_42236420_42237431_42237616_42239669_42239732_42244049_42244168_42260957_42261003_42261195_42261250_42264089_42264204_42267946_42268033_42272062_42272124_42273254
transcript_63846.known	chr15	-	5677	20	FSM	ENSG00000103994.18	ENST00000565380.5	5677	20	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_17	32.1497534702748	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAATCTAGGAGATAATGA	-42482811	True	NA	NA	False	AAAAAG	-2	NA	42491105	42415120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_42417361_42417804_42417952_42421060_42421133_42421916_42421989_42422500_42422621_42423997_42424061_42424833_42425026_42428017_42428135_42435383_42435519_42437231_42437378_42438611_42438668_42439032_42439814_42442072_42442415_42444201_42444263_42444826_42444982_42446588_42446659_42448071_42448706_42466052_42466115_42472235_42472322_42490979
transcript_63849.known	chr15	-	3049	19	FSM	ENSG00000103978.16	ENST00000448392.5	3049	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	84.9517837102645	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTCTAGATTGTCTTA	NA	False	NA	NA	False	NA	NA	NA	42273584	42210451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_42211750_42217802_42217834_42218322_42218379_42219580_42219643_42220061_42220136_42226805_42226910_42227710_42227770_42228711_42228821_42231191_42231261_42233212_42233307_42236319_42236420_42237431_42237616_42239669_42239732_42244049_42244168_42260957_42261003_42261195_42261250_42264089_42264204_42267946_42268033_42273254
transcript_6385.nic	chr1	-	581	6	NIC	ENSG00000176261.16	novel	598	7	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_4	320.350183393111	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTTGTTTTCCTCTTC	-32638484	True	NA	-6	True	AATAAA	-17	NA	32650561	32621829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_32621949_32627507_32627545_32633644_32633728_32633950_32634073_32634701_32634793_32650432
transcript_63858.nic	chr15	+	2015	14	NIC	ENSG00000214013.10	novel	5553	24	NA	NA	169	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_7	12.9696961318097	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAAAGTGATTGAATAAA	42273426	False	NA	NA	False	NA	NA	NA	42273463	42327495	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_42273612_42274167_42274511_42276347_42276411_42278481_42278591_42287690_42287819_42292734_42292918_42297610_42297657_42306545_42306613_42308221_42308319_42310282_42310464_42310692_42310847_42321784_42322021_42326297_42326425_42327362
transcript_63860.nic	chr15	+	2829	13	ISM	ENSG00000214013.10	ENST00000318010.13	5553	24	5	26171	5	0	5prime_fragment	FALSE	canonical	3	14	junction_6	13.3486890742125	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAAAGTGATTGAATAAA	42273035	True	NA	NA	False	NA	NA	NA	42273205	42327495	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_42274511_42276347_42276411_42278481_42278591_42287690_42287819_42292734_42292918_42297610_42297657_42306545_42306613_42308221_42308319_42310282_42310464_42310692_42310847_42321784_42322021_42326297_42326425_42327362
transcript_63876.nic	chr15	-	3411	7	ISM	ENSG00000103994.18	ENST00000564754.7	10396	22	-49	33803	-49	0	5prime_fragment	FALSE	canonical	3	83	junction_3	23.3095116493961	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAATAAAAGAAGGAA	-42491166	False	NA	NA	False	NA	NA	NA	42491190	42446625	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_42446659_42448071_42448706_42449770_42451955_42456957_42457159_42466052_42466115_42472235_42472322_42490979
transcript_63885.known	chr15	+	1437	5	FSM	ENSG00000214013.10	ENST00000440615.6	1437	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	15.4353490404331	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCATTAAAAAAACTAGATTT	42274227	False	NA	106	True	NA	NA	NA	42274241	42284389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_42274511_42276347_42276411_42278481_42278591_42280916_42281134_42283610
transcript_63888.nic	chr15	-	1026	5	ISM	ENSG00000103994.18	ENST00000565380.5	5677	20	-85	31505	-49	0	5prime_fragment	FALSE	canonical	3	37	junction_2	43.5452351009844	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAATAAAAGAAGGAA	-42491166	False	NA	NA	False	NA	NA	NA	42491190	42446625	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_42446659_42448071_42448706_42466052_42466115_42472235_42472322_42490979
transcript_63890.nic	chr15	-	1537	5	ISM	ENSG00000103994.18	ENST00000564754.7	10396	22	-49	38155	-49	689	5prime_fragment	FALSE	canonical	3	83	junction_1	20.712315177208	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATACTGGATCTCTTAAT	-42491166	False	NA	NA	False	AAAAAG	-4	NA	42491190	42450977	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_42451955_42456957_42457159_42466052_42466115_42472235_42472322_42490979
transcript_63896.nic	chr15	-	486	4	ISM	ENSG00000103994.18	ENST00000564754.7	10396	22	-49	44209	-49	-5365	5prime_fragment	FALSE	canonical	3	97	junction_1	15.7480157480236	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAGAGGAAGAGGAAGAAGA	-42491166	False	NA	11	True	NA	NA	NA	42491190	42457031	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_42457159_42466052_42466115_42472235_42472322_42490979
transcript_63901.known	chr15	+	2310	8	FSM	ENSG00000092531.10	ENST00000249647.8	2310	8	0	0	0	0	multi-exon	FALSE	canonical	3	700	junction_5	38.4330852367635	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGTATTGTTCTTTCAA	42483585	True	NA	23	True	ATTAAA	-14	NA	42495633	42533058	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_42495714_42511832_42511904_42512954_42512997_42513398_42513448_42515236_42515355_42528261_42528421_42529674_42529820_42531412
transcript_63904.known	chr15	+	2480	7	FSM	ENSG00000092531.10	ENST00000349777.5	2480	7	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_5	289.681290386521	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGTATTGTTCTTTCAAA	42495291	False	NA	24	True	ATTAAA	-15	NA	42495305	42533059	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_42495714_42511832_42511904_42512954_42512997_42513398_42513448_42515236_42515355_42529674_42529820_42531412
transcript_63909.known	chr15	-	7097	6	FSM	ENSG00000180979.10	ENST00000397130.8	7097	6	0	0	0	0	multi-exon	FALSE	canonical	2	55	junction_5	14.4968962195361	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACATGCAGTATTTGTCTT	-42547769	True	NA	-11	True	AATAAA	-22	NA	42548793	42537828	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_42544125_42545076_42545263_42547260_42547530_42548105_42548245_42548350_42548457_42548692
transcript_6391.known	chr1	+	7077	5	FSM	ENSG00000160062.15	ENST00000373510.9	7077	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	2.54950975679639	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGACTTTAGTTATGTCAC	32538571	True	NA	12	True	AATAAA	-15	NA	32539426	32605941	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32539573_32553458_32553541_32592930_32593755_32595053_32595224_32600086
transcript_63912.known	chr15	-	1459	5	FSM	ENSG00000180979.10	ENST00000569830.1	1459	5	0	0	0	0	multi-exon	FALSE	canonical	2	55	junction_4	15.7003184681076	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACCTCTGTTGGAATGTG	-42547769	True	NA	NA	False	NA	NA	NA	42548793	42544042	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_42544125_42545076_42545263_42547260_42548245_42548350_42548457_42548692
transcript_63914.known	chr15	-	2407	6	FSM	ENSG00000180979.10	ENST00000563454.5	2407	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	36.0388679067476	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTGGCTGGAAGCAAGG	-42547748	True	NA	62	True	AATAAA	-14	NA	42548772	42542523	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_42544125_42545076_42545263_42547260_42547530_42548105_42548245_42548350_42548457_42548666
transcript_63915.known	chr15	+	626	7	FSM	ENSG00000137814.12	ENST00000564279.5	626	7	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_3	48.7456550770311	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTGGTGACTGAGACAGA	42544365	True	NA	NA	False	NA	NA	NA	42548857	42566630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_42548966_42558197_42558291_42559338_42559409_42560781_42560871_42561269_42561403_42563748_42563858_42566606
transcript_63918.known	chr15	+	3921	6	FSM	ENSG00000137814.12	ENST00000260372.8	3921	6	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	14.505171491575	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAGTCCTAGTCTGAA	42544345	True	NA	70	True	AATAAA	-21	NA	42548837	42569994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_42548966_42558197_42558291_42559338_42559409_42561269_42561403_42563748_42563858_42566606
transcript_63921.known	chr15	+	592	6	FSM	ENSG00000137814.12	ENST00000567640.5	592	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	59.194594347795	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGACTGAGACAGAAGAACT	42544335	True	NA	NA	False	NA	NA	NA	42548827	42566636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_42548966_42558197_42558291_42560781_42560871_42561269_42561403_42563748_42563858_42566606
transcript_63924.known	chr15	+	1702	5	FSM	ENSG00000137814.12	ENST00000568876.5	1702	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	41.8173110087198	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAAAATTAGCCAGGCAT	42544335	True	NA	NA	False	AATAAA	-4	NA	42548827	42567858	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_42548966_42559338_42559409_42561269_42561403_42563748_42563858_42566606
transcript_63927.known	chr15	+	590	5	FSM	ENSG00000137814.12	ENST00000563479.5	590	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	58.4652674671039	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATCTTTATAAACATGAT	42544345	True	NA	-23	True	AAGAAA	-1	NA	42548837	42566733	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_42548966_42558197_42558291_42561269_42561403_42563748_42563858_42566606
transcript_63929.known	chr15	+	15637	33	FSM	ENSG00000159433.12	ENST00000290607.12	15637	33	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	5.05593710403917	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAGTGAAGAGTAGATGAA	42575254	True	NA	22	True	ATTAAA	-19	NA	42575605	42720998	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_42575763_42583345_42583416_42585520_42585638_42634855_42634973_42637906_42637940_42638025_42638088_42638699_42638813_42651015_42651086_42652519_42652593_42661157_42661226_42662793_42662892_42663280_42663491_42663819_42663918_42665252_42665331_42665785_42665849_42669157_42669338_42674439_42674492_42674826_42674965_42675663_42675747_42675871_42675976_42681421_42681613_42682103_42682576_42684115_42694343_42694527_42694726_42695139_42695324_42695742_42695881_42716676_42716765_42716926_42717049_42717730_42717796_42717976_42718180_42718434_42718515_42718751_42718911_42719472
transcript_63931.known	chr15	-	4657	28	FSM	ENSG00000140326.13	ENST00000356231.4	4657	28	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_26	11.0531823248408	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTGTCACCTGTCTTCTC	-42735958	True	NA	NA	False	AATAAA	-33	NA	42737128	42723543	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_42724617_42725143_42725252_42725488_42725671_42726096_42726161_42726309_42726418_42727620_42727770_42727954_42728034_42728203_42728268_42728651_42728811_42729022_42729127_42729228_42729363_42729567_42729623_42729795_42729886_42730127_42730216_42730597_42730765_42730924_42731072_42731210_42731332_42731619_42731826_42732332_42732409_42733096_42733187_42733937_42734048_42734225_42734347_42735099_42735179_42735260_42735375_42735509_42735680_42735874_42736079_42736301_42736781_42737012
transcript_6394.known	chr1	+	1943	5	FSM	ENSG00000160062.15	ENST00000316459.4	1943	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	5.52268050859363	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTGAAATCATTCATATT	32538573	True	NA	NA	False	ACTAAA	-2	NA	32539428	32600990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32539573_32553458_32553541_32592930_32593755_32595053_32595224_32600267
transcript_63947.known	chr15	-	3332	29	FSM	ENSG00000159459.12	ENST00000546274.6	3332	29	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_22	5.83925840972209	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTTTTTTTTAAATTG	-43104687	True	NA	NA	False	AATAAA	-23	NA	43106113	43015655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_43015870_43017094_43017182_43021274_43021376_43022701_43022802_43024828_43024984_43025380_43025430_43026560_43026664_43027775_43027829_43029943_43030069_43032567_43032632_43036177_43036280_43036527_43036594_43037772_43037884_43038170_43038233_43043214_43043396_43047160_43047290_43048391_43048492_43054741_43054900_43056343_43056443_43058340_43058430_43059084_43059193_43059701_43059826_43060051_43060115_43067897_43068037_43070794_43070926_43074978_43075090_43082637_43082717_43085983_43086241_43105941
transcript_63949.known	chr15	+	2707	14	FSM	ENSG00000137842.7	ENST00000260403.7	2707	14	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_3	4.2994426499945	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGTGAGCCTGAGGCTTG	43133251	True	NA	NA	False	AATAAA	-23	NA	43133585	43185144	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43133983_43134256_43134369_43135511_43135650_43138573_43138620_43146492_43146635_43148754_43148880_43149028_43149152_43151789_43151946_43154671_43154832_43160680_43160795_43169592_43169678_43178606_43178712_43181180_43181300_43184259
transcript_63953.known	chr15	+	1634	12	FSM	ENSG00000166946.14	ENST00000566515.5	1634	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_9	85.5950489029255	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTCAATAAAATGCTAACT	43182391	True	NA	NA	False	AGTAAA	-32	NA	43185327	43195164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43185608_43185819_43185880_43186153_43186234_43189198_43189281_43190054_43190152_43190324_43190399_43190965_43191043_43191394_43191676_43192742_43192804_43194080_43194138_43194414_43194462_43194726
transcript_63955.known	chr15	+	3515	11	FSM	ENSG00000166946.14	ENST00000300213.9	3515	11	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_5	12.6130884401878	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCTCAGTTATTCCTT	43182466	True	NA	7	True	AATAAA	-20	NA	43185402	43197177	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43185608_43185819_43185880_43186153_43186234_43189198_43189281_43190054_43190152_43190324_43190399_43190965_43191043_43191394_43191676_43192742_43192804_43194414_43194462_43194726
transcript_63958.known	chr15	+	1385	10	FSM	ENSG00000166946.14	ENST00000568507.5	1385	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	68.182398800371	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTGCCAGTGATTAAATG	43182502	True	NA	NA	False	AATAAA	-6	NA	43185438	43195180	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43185608_43185819_43185880_43186153_43186234_43189198_43189281_43190324_43190399_43190965_43191043_43191394_43191676_43192742_43192804_43194414_43194462_43194726
transcript_63959.known	chr15	+	1450	10	FSM	ENSG00000166946.14	ENST00000563065.5	1450	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	69.2164256535031	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGTGCCCTTCCAAAG	43182469	True	NA	NA	False	AATAAA	-21	NA	43185405	43195195	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43185608_43185819_43185880_43189198_43189281_43190054_43190152_43190324_43190399_43190965_43191043_43191394_43191676_43192742_43192804_43194414_43194462_43194726
transcript_63961.known	chr15	+	1479	9	FSM	ENSG00000166946.14	ENST00000444658.7	1479	9	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_3	13.0192165662915	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAATGAGTGCCCTTCCA	43185881	True	NA	NA	False	AATAAA	-18	NA	43185939	43195192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43186234_43189198_43189281_43190054_43190152_43190324_43190399_43190965_43191043_43191394_43191676_43192742_43192804_43194414_43194462_43194726
transcript_63964.known	chr15	+	4268	13	FSM	ENSG00000168803.16	ENST00000562188.7	4268	13	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	8.31497978884428	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCCTTATCATGAAATTC	43329452	True	NA	NA	False	NA	NA	NA	43330671	43354569	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43330860_43331899_43332001_43333310_43333435_43334944_43335171_43335695_43335827_43336625_43336687_43340264_43340353_43342993_43343076_43345853_43345981_43347015_43347097_43348906_43349046_43350940_43351042_43351750
transcript_63966.known	chr15	+	3514	12	FSM	ENSG00000168803.16	ENST00000428046.7	3514	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	12.6065705025082	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTCCCTGAGTTCTGTG	43329454	True	NA	24	True	AATAAA	-14	NA	43330673	43353898	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43330860_43331899_43332001_43333310_43333435_43334944_43335171_43335695_43335827_43336625_43336687_43340264_43340353_43342993_43343076_43345853_43345981_43348906_43349046_43350940_43351042_43351750
transcript_63971.nic	chr15	+	1724	11	ISM	ENSG00000168803.16	ENST00000562188.7	4268	13	-9	5157	-9	0	5prime_fragment	TRUE	canonical	3	32	junction_2	8.2951793229562	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATTTTCACATGTCTGT	43329443	True	NA	3	True	ATTAAA	-16	NA	43330662	43349412	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_43330860_43331899_43332001_43333310_43333435_43334944_43335171_43335695_43335827_43336625_43336687_43340264_43340353_43342993_43343076_43345853_43345981_43347015_43347097_43348906
transcript_63974.known	chr15	+	1559	10	FSM	ENSG00000168803.16	ENST00000389651.8	1559	10	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_1	13.7956872845945	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATTTTCACATGTCTGT	43329507	True	NA	3	True	ATTAAA	-16	NA	43330726	43349412	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43330860_43333310_43333435_43334944_43335171_43335695_43335827_43336625_43336687_43340264_43340353_43342993_43343076_43345853_43345981_43347015_43347097_43348906
transcript_63980.nic	chr15	+	311	2	ISM	ENSG00000168803.16	ENST00000389651.8	1559	10	-55	15979	0	1050	5prime_fragment	FALSE	canonical	1	10	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTTTTTCCATTTTAA	43329452	True	NA	NA	False	AAGAAA	-11	NA	43330671	43333433	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_43330860_43333310
transcript_63983.known	chr15	-	6179	28	FSM	ENSG00000067369.14	ENST00000450115.6	6179	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	57.5514799071768	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGGATTTCTTCATCTG	-43485876	True	NA	-8	True	AATAAA	-24	NA	43493127	43407215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_43407571_43407942_43408089_43408896_43409097_43409646_43409742_43413118_43413329_43415593_43415810_43416224_43416417_43420304_43420736_43421024_43421175_43421854_43422127_43428015_43428169_43432193_43432678_43438323_43438417_43441525_43441584_43446386_43446591_43447365_43447486_43455891_43457219_43469857_43470067_43474672_43474768_43475564_43475695_43477592_43477760_43479396_43479527_43479858_43480018_43480894_43481023_43491668_43491754_43492001_43492096_43492283_43492469_43493036
transcript_63984.known	chr15	-	5574	23	FSM	ENSG00000067369.14	ENST00000572085.5	5574	23	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_14	24.7893605543631	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	-43485905	True	NA	NA	False	NA	NA	NA	43493156	43415221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_43415810_43416224_43416417_43420304_43420736_43421024_43421175_43421854_43422127_43428015_43428169_43432193_43432678_43438323_43438417_43441525_43441584_43446386_43446591_43447365_43447486_43455891_43457219_43469857_43470067_43474672_43474768_43475564_43475695_43477592_43477760_43479396_43479527_43479858_43480018_43480894_43481023_43491668_43491754_43492001_43492096_43492283_43492469_43493036
transcript_63991.nic	chr15	-	3348	17	ISM	ENSG00000067369.14	ENST00000572085.5	5574	23	-15	17427	-15	0	5prime_fragment	FALSE	canonical	3	138	junction_8	18.096529363389	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGGAGAAGAGGAGAAAGAA	-43485920	True	NA	NA	False	NA	NA	NA	43493171	43432648	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_43432678_43438323_43438417_43441525_43441584_43446386_43446591_43447365_43447486_43455891_43457219_43469857_43470067_43474672_43474768_43475564_43475695_43477592_43477760_43479396_43479527_43479858_43480018_43480894_43481023_43491668_43491754_43492001_43492096_43492283_43492469_43493036
transcript_63995.nic	chr15	-	2273	12	ISM	ENSG00000067369.14	ENST00000413546.1	3143	16	-85	23814	-15	-9308	5prime_fragment	FALSE	canonical	3	138	junction_3	20.375402444943	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGCTCAGAAGCTATGGA	-43485920	True	NA	NA	False	NA	NA	NA	43493171	43456462	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_43457219_43469857_43470067_43474672_43474768_43475564_43475695_43477592_43477760_43479396_43479527_43479858_43480018_43480894_43481023_43491668_43491754_43492001_43492096_43492283_43492469_43493036
transcript_64.known	ERCC-00170	+	1007	1	FSM	ERCC-00170A	DQ516773	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00170_+_0_1000
transcript_64007.known	chr15	+	6812	18	FSM	ENSG00000137822.13	ENST00000564079.6	6812	18	0	0	0	0	multi-exon	TRUE	canonical	3	63	junction_12	10.6156507818641	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGAGTGGTTTTCTTAT	43368684	True	NA	NA	False	ATTAAA	-21	NA	43371100	43409771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43371433_43376097_43376227_43376502_43376626_43377013_43377068_43377846_43377904_43380083_43380164_43383302_43383505_43385790_43385957_43386205_43386331_43395106_43395158_43395582_43395689_43397213_43397322_43398040_43398180_43400043_43400222_43401715_43401851_43403682_43403800_43404412_43404553_43405201
transcript_6401.known	chr1	-	817	4	FSM	ENSG00000176261.16	ENST00000492007.6	817	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	342.639103949849	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTACCTCAGCCTCCCG	-32638472	True	NA	NA	False	NA	NA	NA	32650549	32621310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32621949_32627507_32627545_32634767_32634793_32650432
transcript_64018.known	chr15	-	6055	6	FSM	ENSG00000140265.14	ENST00000684362.1	6055	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	25.350345165303	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCTGGTGTTTCTTGAAG	-43370329	True	NA	NA	False	AATAAA	-16	NA	43371043	43358174	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_43361942_43363914_43364383_43366109_43366809_43368922_43369128_43369595_43370026_43370557
transcript_64020.known	chr15	-	5595	5	FSM	ENSG00000140265.14	ENST00000396976.6	5595	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	20.2900837849428	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTGTTTCTTGAAGTGT	-43369785	False	NA	NA	False	AATAAA	-19	NA	43370048	43358171	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_43361942_43363914_43364383_43366109_43366809_43368922_43369128_43369595
transcript_64025.known	chr15	-	5718	31	NIC	ENSG00000168781.23	novel	5636	30	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_10	17.9268885569508	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGTGATGTCCTTGTGA	NA	False	NA	-1	True	AATAAA	-30	NA	43590253	43533461	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_43535477_43539469_43539584_43558794_43558933_43564102_43564166_43564866_43564993_43568462_43568554_43571411_43571577_43571723_43571841_43572768_43572877_43573033_43573161_43573356_43573485_43573808_43574033_43574221_43574364_43576370_43576554_43576826_43576949_43577107_43577240_43577452_43577536_43577621_43577732_43577875_43577952_43578069_43578157_43579018_43579121_43581001_43581124_43581226_43581389_43581852_43581955_43582094_43582250_43582563_43582650_43582861_43582953_43583403_43583600_43584357_43584533_43584798_43584893_43590171
transcript_64028.known	chr15	+	1779	10	FSM	ENSG00000237289.10	ENST00000300283.10	1779	10	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	68.564649135769	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTGTGTTACTTCTAA	43593003	False	NA	20	True	AGTAAA	-20	NA	43593053	43599406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43593272_43594044_43594368_43594971_43595171_43595373_43595470_43595855_43596078_43596206_43596293_43596407_43596532_43598192_43598328_43598826_43598953_43599156
transcript_64030.known	chr15	+	1579	9	FSM	ENSG00000237289.10	ENST00000441322.6	1579	9	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_7	25.4506262201935	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTGTGTTACTTCTAA	43594007	False	NA	20	True	AGTAAA	-20	NA	43594026	43599406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43594368_43594971_43595171_43595373_43595470_43595855_43596078_43596206_43596293_43596407_43596532_43598192_43598328_43598826_43598953_43599156
transcript_64037.known	chr15	+	1779	10	FSM	ENSG00000223572.10	ENST00000434505.5	1779	10	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	67.3126114061918	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTGTGTTACTTCTAA	NA	False	NA	20	True	AGTAAA	-20	NA	43692885	43699222	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43693104_43693876_43694200_43694803_43695003_43695205_43695302_43695687_43695910_43696038_43696125_43696239_43696364_43698013_43698149_43698640_43698767_43698972
transcript_64040.known	chr15	+	1579	9	FSM	ENSG00000223572.10	ENST00000413453.7	1579	9	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_7	25.4432579478336	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTGTGTTACTTCTAA	43693828	False	NA	20	True	AGTAAA	-20	NA	43693858	43699222	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43694200_43694803_43695003_43695205_43695302_43695687_43695910_43696038_43696125_43696239_43696364_43698013_43698149_43698640_43698767_43698972
transcript_6406.known	chr1	-	538	2	FSM	ENSG00000176261.16	ENST00000466361.1	538	2	0	0	0	0	multi-exon	FALSE	canonical	3	693	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTGTGAGGCTGAGGCA	-32638458	True	NA	NA	False	AATACA	-41	NA	32650535	32634357	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32634793_32650432
transcript_64060.known	chr15	+	3680	13	FSM	ENSG00000167004.14	ENST00000300289.10	3680	13	0	0	0	0	multi-exon	TRUE	canonical	3	7426	junction_3	389.321873047654	1239	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGTTCCCAGACCTTGT	43671447	True	NA	17	True	AGTAAA	-19	NA	43746437	43773278	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43746707_43753823_43753903_43756648_43756767_43761423_43761532_43763076_43763207_43765449_43765567_43765886_43766013_43766727_43766911_43768488_43768598_43769517_43769647_43770249_43770330_43770522_43770581_43771104
transcript_64078.known	chr15	-	1755	11	FSM	ENSG00000128886.12	ENST00000319359.8	1755	11	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_6	4.67011777153425	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGACTGCTTCTGTGTCCTT	-43776626	True	NA	-31	True	ATTAAA	-2	NA	43776966	43772619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_43773227_43773303_43773349_43774181_43774354_43774475_43774519_43774595_43774774_43775305_43775382_43775524_43775611_43775721_43775924_43776038_43776152_43776508_43776545_43776769
transcript_64094.known	chr15	+	1931	5	FSM	ENSG00000140264.21	ENST00000381359.5	1931	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	5727.25878475035	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCCGTGTGCCCAGGGCT	43777063	False	NA	51	True	NA	NA	NA	43777099	43794595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43777503_43785409_43785535_43791975_43792384_43792974_43793084_43793709
transcript_64095.known	chr15	+	3011	4	FSM	ENSG00000242028.8	ENST00000442995.4	3011	4	0	0	0	0	multi-exon	FALSE	canonical	3	3654	junction_2	91.9758422389029	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGCTAGTACCTGAGCT	43753179	True	NA	NA	False	AATAAA	-18	NA	43800598	43804427	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43800785_43801131_43801188_43801517_43801570_43801710
transcript_64100.known	chr15	+	586	3	FSM	ENSG00000140264.21	ENST00000402131.5	586	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	6398.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTACCCCTTCCCAGTGTT	43712924	True	NA	-1	True	NA	NA	NA	43792367	43793975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43792579_43792974_43793084_43793709
transcript_64101.known	chr15	+	690	3	FSM	ENSG00000140264.21	ENST00000403425.5	690	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	6382	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGCGCCTGGTTTGACT	43712924	True	NA	28	True	ATTAAA	-17	NA	43792367	43794046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43792612_43792974_43793084_43793709
transcript_64109.known	chr15	+	548	2	FSM	ENSG00000140264.21	ENST00000474290.1	548	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACGCCTGGCTAATGTTTT	43776989	False	NA	NA	False	NA	NA	NA	43777086	43778116	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43777503_43777984
transcript_64110.known	chr15	+	3096	2	FSM	ENSG00000242028.8	ENST00000458412.2	3096	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGCTAGTACCTGAGCT	43753179	True	NA	NA	False	AATAAA	-18	NA	43800598	43804427	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43800785_43801517
transcript_64111.known	chr15	-	1653	4	FSM	ENSG00000205771.7	ENST00000381680.7	1657	4	4	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	7.78888096369861	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGCCGGGCTTGGTGGT	-43746126	True	NA	NA	False	ACTAAA	-23	NA	43746302	43735933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_43737009_43744394_43744569_43745021_43745171_43746047
transcript_64112.known	chr15	+	506	3	FSM	ENSG00000140264.21	ENST00000339624.9	506	3	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_2	4624.5	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGCGCCTGGTTTGACT	43712903	True	NA	28	True	ATTAAA	-17	NA	43792346	43794046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43792384_43792974_43793084_43793686
transcript_64113.known	chr15	-	2043	9	FSM	ENSG00000140259.7	ENST00000267812.4	2043	9	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_2	15.3622914957372	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTGTTTCACATTTTGA	-43820248	True	NA	-1	True	ATTAAA	-25	NA	43824690	43804491	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_43805277_43805375_43805466_43809754_43809915_43812986_43813148_43813248_43813358_43814500_43814689_43814944_43815075_43817228_43817449_43824490
transcript_64117.nic	chr15	-	649	4	ISM	ENSG00000140259.7	ENST00000267812.4	2043	9	-46	10144	-46	-9730	5prime_fragment	FALSE	canonical	3	310	junction_2	8.2192186706253	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGAGATGGAAGTCATGG	-43820294	True	NA	12	True	NA	NA	NA	43824736	43814635	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_43814689_43814944_43815075_43817228_43817449_43824490
transcript_64118.nic	chr15	-	633	3	ISM	ENSG00000140259.7	ENST00000267812.4	2043	9	-110	10480	-110	-10066	5prime_fragment	FALSE	canonical	3	310	junction_1	6	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGGAGGAGGAAATTGA	-43820358	True	NA	-13	True	NA	NA	NA	43824800	43814971	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_43815075_43817228_43817449_43824490
transcript_64120.known	chr15	+	3932	13	FSM	ENSG00000092470.12	ENST00000263795.11	3932	13	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_8	16.0147501454822	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTCCTCACTTTTGTGG	43825426	True	NA	4	True	AATAAA	-16	NA	43827001	43868412	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43827093_43827964_43828367_43835060_43835151_43836160_43836217_43839604_43839729_43842414_43842517_43842627_43842672_43843900_43844055_43851086_43851246_43856945_43857164_43858670_43858824_43861332_43861387_43866127
transcript_64124.known	chr15	+	2586	13	FSM	ENSG00000092470.12	ENST00000381246.6	2586	13	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	30.9528090629734	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTTTGATTCTATAGTA	43825404	True	NA	23	True	ATTAAA	-20	NA	43826979	43867018	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_43827119_43827964_43828367_43835060_43835151_43836160_43836217_43839604_43839729_43842414_43842517_43842627_43842672_43843900_43844055_43851086_43851246_43856945_43857164_43858670_43858824_43861332_43861387_43866127
transcript_64125.known	chr15	-	5051	14	FSM	ENSG00000171877.21	ENST00000417257.6	5051	14	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	7.07525063850272	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGAGTGGGCTCTTTCT	-44194374	True	NA	-3	True	AATAAA	-14	NA	44195271	43870763	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_43874463_43883702_43883810_43884726_43884796_43885680_43885756_43888174_43888267_43888808_43888873_43891980_43892070_43902174_43902263_43905827_43905952_43909881_43909980_43919458_43919538_43919766_43919810_43924204_43924310_44194952
transcript_64130.known	chr15	-	2042	14	FSM	ENSG00000171877.21	ENST00000449926.5	2042	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	10.7235294022181	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGTCTGAGTTGGATTT	NA	False	NA	-2	True	ATTAAA	-18	NA	43924309	43873274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_43873940_43874118_43874463_43883702_43883810_43884726_43884796_43885680_43885756_43888174_43888267_43888808_43888873_43891980_43892070_43902174_43902263_43905827_43905952_43909881_43909980_43919458_43919538_43919766_43919810_43924204
transcript_64131.known	chr15	-	396	1	FSM	ENSG00000227973.1	ENST00000451079.1	396	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATCATATGAAAGACTGAAA	-43876229	False	NA	NA	False	AAGAAA	-5	NA	43876244	43875848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_43875800_43876200
transcript_64132.known	chr15	+	3974	10	FSM	ENSG00000166734.20	ENST00000299957.11	3974	10	0	0	0	0	multi-exon	TRUE	canonical	3	105	junction_8	24.9077309630644	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTGTTTTGCTGATTCT	NA	False	NA	10	True	AATAAA	-18	NA	44288718	44415758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_44289357_44322964_44323020_44328684_44328788_44331987_44332079_44337762_44337908_44338236_44338318_44379689_44379789_44380805_44380977_44402886_44403055_44413335
transcript_64135.known	chr15	+	3764	9	FSM	ENSG00000166734.20	ENST00000345795.6	3764	9	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_8	36.8169033868955	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCACTGTTTTGCTGATTC	44287831	False	NA	9	True	AATAAA	-17	NA	44288759	44415757	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_44289357_44322964_44323020_44328684_44328788_44331987_44332079_44337762_44337908_44338236_44338318_44379689_44379789_44380805_44380977_44413335
transcript_64142.known	chr15	+	6433	13	FSM	ENSG00000137770.14	ENST00000260327.9	6433	13	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_1	28.7793328623163	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCTTTGATGATATTTT	44420799	True	NA	15	True	AATAAA	-16	NA	44427628	44529038	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_44427773_44458990_44459201_44484223_44484363_44486550_44486701_44490783_44491000_44496379_44496459_44497026_44497139_44499726_44499814_44514597_44514661_44514764_44514845_44519168_44519296_44521310_44521407_44524108
transcript_64151.nic	chr15	+	524	4	ISM	ENSG00000137770.14	ENST00000260327.9	6433	13	-3	42460	-3	0	5prime_fragment	FALSE	canonical	3	287	junction_1	44.7238440009602	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATGTAAAACAAAATGGAA	44420796	True	NA	NA	False	NA	NA	NA	44427625	44486578	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_44427773_44458990_44459201_44484223_44484363_44486550
transcript_64152.nic	chr15	+	269	2	ISM	ENSG00000137770.14	ENST00000560834.1	571	4	-43	25262	-23	-25229	5prime_fragment	FALSE	canonical	3	287	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAAATATTCAGAGGTTG	44420769	True	NA	NA	False	NA	NA	NA	44427598	44459085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_44427773_44458990
transcript_64153.nic	chr15	+	358	2	ISM	ENSG00000137770.14	ENST00000560834.1	571	4	-18	25148	2	-25115	5prime_fragment	FALSE	canonical	3	287	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAATGATTTTACCATATA	44420794	True	NA	4	True	ATTAAA	-27	NA	44427623	44459199	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_44427773_44458990
transcript_64155.known	chr15	-	1288	3	FSM	ENSG00000179523.6	ENST00000653319.1	1288	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	32	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATCTCTTTCTGCATATA	-44537024	False	NA	-27	True	NA	NA	NA	44537046	44534526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_44535475_44536042_44536359_44537022
transcript_64156.known	chr15	-	1408	3	FSM	ENSG00000179523.6	ENST00000560049.2	1408	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	11.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTATTGATTCTGTTTC	-44536900	False	NA	-5	True	AATAAA	-19	NA	44536922	44534504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_44535475_44536042_44536359_44536800
transcript_64158.known	chr15	-	2863	2	FSM	ENSG00000179523.6	ENST00000313807.5	2873	2	10	0	-1	0	multi-exon	FALSE	canonical	3	66	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	-44536901	False	NA	NA	False	NA	NA	NA	44536923	44533492	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_44535475_44536042
transcript_64159.known	chr15	-	570	2	FSM	ENSG00000179523.6	ENST00000558323.1	570	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGGATTGGAAGGAGGCA	-44535921	False	NA	NA	False	NA	NA	NA	44535943	44535088	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_44535475_44535759
transcript_64162.known	chr15	-	500	2	FSM	ENSG00000179523.6	ENST00000559356.1	500	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAGAAGTCAGGAAAAGG	-44536310	True	NA	NA	False	NA	NA	NA	44536894	44535068	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_44535475_44536800
transcript_64163.known	chr15	-	7772	40	FSM	ENSG00000104133.16	ENST00000261866.12	7772	40	0	0	0	0	multi-exon	TRUE	canonical	2	43	junction_37	16.3721914294482	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATGTCATTATTACTGC	-44661258	True	NA	-1	True	AATAAA	-17	NA	44663662	44562695	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_44563302_44564546_44564699_44565853_44566010_44566216_44566306_44567423_44567593_44569397_44569506_44570524_44570659_44572682_44572821_44573546_44573746_44574901_44575042_44583813_44584559_44585635_44585851_44589251_44589415_44592330_44592439_44595258_44595460_44596082_44596356_44596783_44596944_44598264_44598374_44598630_44598837_44600466_44600633_44606024_44606092_44608443_44608606_44610839_44610986_44613429_44613537_44615362_44615567_44620189_44620404_44621758_44621935_44622219_44622348_44622727_44622800_44626330_44626508_44628668_44628845_44629232_44629389_44633504_44633638_44648865_44649012_44651490_44651940_44652128_44652267_44657094_44657297_44659078_44659304_44660431_44660617_44663390
transcript_64165.known	chr15	-	7586	40	FSM	ENSG00000104133.16	ENST00000684038.1	7586	40	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	23.6999099802161	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATAGATTTTCAATTCA	-44661264	True	NA	-21	True	NA	NA	NA	44663668	44562715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_44563302_44564546_44564699_44565853_44566010_44566216_44566306_44567423_44567593_44569397_44569506_44570524_44570659_44572682_44572821_44573546_44573746_44574901_44575042_44583813_44584559_44585635_44585851_44589251_44589415_44592330_44592439_44595258_44595460_44596082_44596356_44596783_44596944_44598264_44598374_44598630_44598837_44600466_44600633_44601738_44601825_44606024_44606092_44608443_44608606_44610839_44610986_44613429_44613537_44615362_44615567_44620189_44620404_44621758_44621935_44622219_44622348_44622727_44622800_44626330_44626508_44628668_44628845_44629232_44629389_44633504_44633638_44648865_44649012_44651490_44651940_44652128_44652267_44657094_44657264_44660431_44660617_44663390
transcript_64166.known	chr15	-	2579	12	FSM	ENSG00000104133.16	ENST00000559193.5	2579	12	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_9	7.46451661291358	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATCTCATGACTTTTTT	-44661254	True	NA	NA	False	AATATA	-15	NA	44663658	44622475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_44622800_44626330_44626508_44628668_44628845_44629232_44629389_44633504_44633638_44648865_44649012_44651490_44651940_44652128_44652267_44657094_44657297_44659078_44659304_44660431_44660617_44663390
transcript_64170.known	chr15	+	2479	8	FSM	ENSG00000104131.13	ENST00000261868.10	2479	8	0	0	0	0	multi-exon	FALSE	canonical	3	494	junction_6	63.5783302834594	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCAGGTACAGGTATTCT	44525290	True	NA	5	True	ATTAAA	-18	NA	44537146	44562803	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_44537238_44537323_44537428_44550875_44550931_44551430_44551523_44554552_44554668_44557488_44557651_44560248_44560323_44561017
transcript_64175.nic	chr15	+	792	7	ISM	ENSG00000104131.13	ENST00000261868.10	2479	8	-100	2482	-78	-254	5prime_fragment	FALSE	canonical	3	494	junction_6	65.5101773263768	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAGAGCAAGCTGTGTAG	44525190	True	NA	NA	False	AAGAAA	-2	NA	44537046	44560321	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_44537238_44537323_44537428_44550875_44550931_44551430_44551523_44554552_44554668_44557488_44557651_44560248
transcript_64176.known	chr15	+	925	7	FSM	ENSG00000104131.13	ENST00000535391.5	925	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	235.094839018923	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTTGCAACGTGACAAAAAA	44525326	True	NA	NA	False	ACTAAA	-13	NA	44537182	44561447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_44537238_44537323_44537428_44550875_44550931_44551430_44551523_44554552_44554668_44560248_44560323_44561017
transcript_64177.known	chr15	+	1550	6	FSM	ENSG00000104131.13	ENST00000424492.7	1550	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	225.442320782944	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGTAAATTGTTATGTT	44525268	True	NA	-63	True	TATAAA	-33	NA	44537124	44561999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_44537238_44537323_44537428_44554552_44554668_44557488_44557651_44560248_44560323_44561017
transcript_64179.nic	chr15	+	377	4	ISM	ENSG00000104131.13	ENST00000535391.5	925	7	-136	9990	-78	-3117	5prime_fragment	FALSE	canonical	3	599	junction_3	25.5734237050888	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGCAGAGAAGATAAAAGAG	44525190	True	NA	1	True	AAGAAA	-5	NA	44537046	44551457	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_44537238_44537323_44537428_44550875_44550931_44551430
transcript_64181.nic	chr15	+	350	3	ISM	ENSG00000104131.13	ENST00000535391.5	925	7	-136	10517	-78	-3644	5prime_fragment	FALSE	canonical	3	605	junction_1	25.5	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCCACTGGGGCGCCTC	44525190	True	NA	NA	False	AGTAAA	-6	NA	44537046	44550930	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_44537238_44537323_44537428_44550875
transcript_64183.known	chr15	+	943	4	FSM	ENSG00000166710.22	ENST00000648006.3	943	4	0	0	0	0	multi-exon	FALSE	canonical	3	2883	junction_2	77.7988860245869	824	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTATCTCTTATATCTC	44693973	True	NA	33	True	AATAAA	-14	NA	44711516	44718145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_44711614_44715422_44715702_44716328_44716357_44717606
transcript_64186.known	chr15	+	3190	2	FSM	ENSG00000185880.13	ENST00000560141.2	3190	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTATGGATGTTGTGAG	NA	False	NA	1	True	AATAAA	-12	NA	44729000	44734000	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_44729553_44731362
transcript_64193.known	chr15	+	4758	9	FSM	ENSG00000140263.15	ENST00000674405.1	4758	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	112.035429664013	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGTTGCATATTTTTGT	45014684	True	NA	NA	False	AATAAA	-14	NA	45023167	45077172	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_45023350_45040407_45040442_45043256_45043422_45061066_45061227_45065270_45065390_45068180_45068247_45068876_45068979_45072316_45072439_45073364
transcript_64196.known	chr15	+	4818	9	FSM	ENSG00000140263.15	ENST00000267814.14	4818	9	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_7	54.9907662703476	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTCTCCTGACTCAT	45014711	True	NA	NA	False	AATAAA	-27	NA	45023194	45077185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_45023350_45040407_45040442_45043256_45043422_45061066_45061227_45065270_45065390_45068180_45068247_45068876_45069053_45072316_45072439_45073364
transcript_6420.known	chr1	+	7883	12	FSM	ENSG00000162521.19	ENST00000373493.10	7883	12	0	0	0	0	multi-exon	FALSE	canonical	3	1658	junction_9	108.727424749058	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATCTGTTTCTTTTTTT	32623217	True	NA	NA	False	AATAAA	-16	NA	32651207	32686211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32651323_32651913_32652062_32657426_32657573_32668224_32668399_32668738_32668855_32668971_32669133_32669230_32669358_32669485_32669564_32672449_32672527_32672641_32672700_32672790_32672902_32679639
transcript_64201.nic	chr15	-	2089	6	NIC	ENSG00000138606.20	novel	2215	7	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_2	39.8577470512321	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCGAAGCATCAAGTTCC	-45186367	True	NA	-10	True	TATAAA	-39	NA	45187981	45167213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_45168134_45171882_45172003_45172146_45172319_45175218_45175426_45178164_45178307_45187453
transcript_64202.known	chr15	-	2062	6	FSM	ENSG00000138606.20	ENST00000560540.5	2062	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	42.5318704032635	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCGAAGCATCAAGTTCC	-45186342	True	NA	-10	True	TATAAA	-39	NA	45187956	45167213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_45168134_45171882_45172003_45172148_45172319_45175218_45175426_45178164_45178307_45187453
transcript_64206.known	chr15	-	1731	4	FSM	ENSG00000138606.20	ENST00000560734.5	1731	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	60.1405760605009	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTCTGGAGCAGACACAG	-45186338	True	NA	-47	True	TATAAA	-2	NA	45187952	45167250	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_45168134_45175218_45175426_45178164_45178307_45187453
transcript_64208.known	chr15	-	2348	9	FSM	ENSG00000171766.17	ENST00000396659.8	2348	9	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	5.39531046372681	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCATTGGTCTAGTCAT	-45377839	True	NA	-4	True	AATAAA	-21	NA	45378544	45361123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_45362222_45363899_45364017_45364796_45364861_45366045_45366211_45366370_45366509_45368069_45368261_45369325_45369522_45376600_45376820_45378384
transcript_64216.known	chr15	+	2561	8	FSM	ENSG00000171763.20	ENST00000305560.11	2561	8	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	12.9662041083577	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTGTGTGTGTGTTGAT	45401655	True	NA	6	True	AATAAA	-18	NA	45402335	45421415	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_45403519_45405319_45405506_45410371_45410531_45414570_45414781_45415586_45415780_45417268_45417400_45418556_45418683_45421042
transcript_6422.known	chr1	+	1417	12	FSM	ENSG00000162521.19	ENST00000373485.5	1417	12	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_11	520.603384831025	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGATGGGTTTTATTTA	32623243	True	NA	26	True	AATAAA	-21	NA	32651233	32680657	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32651323_32651913_32652062_32657426_32657573_32668224_32668399_32668738_32668855_32668971_32669133_32669230_32669358_32669485_32669564_32672449_32672527_32672641_32672700_32672790_32672902_32680525
transcript_64220.known	chr15	+	2464	8	FSM	ENSG00000171763.20	ENST00000531970.5	2464	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	24.4773948193605	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAAAAAACT	45401694	True	NA	-82	True	AATAAA	-7	NA	45402374	45421327	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_45403519_45405319_45405506_45410371_45410531_45414570_45414781_45415586_45415810_45417268_45417400_45418556_45418683_45421042
transcript_64224.known	chr15	+	1839	5	FSM	ENSG00000104164.12	ENST00000567523.5	1839	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	45.088801270382	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAAAAAAATT	45583499	True	NA	NA	False	NA	NA	NA	45587378	45607773	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_45587526_45592134_45592277_45603103_45603188_45605427_45605515_45606394
transcript_64226.known	chr15	+	3838	5	FSM	ENSG00000104164.12	ENST00000565323.6	3838	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	46.1214429522755	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTGATGTCATTTATCA	45583710	False	NA	7	True	AATAAA	-15	NA	45587589	45609708	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_45587797_45592134_45592277_45603099_45603188_45605427_45605515_45606394
transcript_64228.known	chr15	+	616	5	FSM	ENSG00000104164.12	ENST00000565409.5	616	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	45.2789962344573	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTATGTCATATGTTGA	45587521	True	NA	NA	False	NA	NA	NA	45587784	45606601	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_45587877_45592134_45592277_45603099_45603188_45605427_45605515_45606394
transcript_64229.known	chr15	+	592	4	FSM	ENSG00000104164.12	ENST00000568597.5	592	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	52.3152835115025	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCATATGTTGAAATCCT	45583496	True	NA	NA	False	NA	NA	NA	45587375	45606607	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_45587526_45592134_45592277_45605427_45605515_45606394
transcript_64231.known	chr15	+	1052	4	FSM	ENSG00000104164.12	ENST00000567461.5	1052	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	57.1333722286915	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAAAGAGGTAAACCTTT	45587131	True	NA	NA	False	AAGAAA	-28	NA	45587235	45606981	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_45587526_45603099_45603188_45605427_45605515_45606394
transcript_64234.known	chr15	-	10137	17	FSM	ENSG00000104177.19	ENST00000324324.12	10137	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	51.2797169941489	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTAGTGCCCTGTTGTCC	-48169183	True	NA	-4	True	AATAAA	-15	NA	48178295	48134631	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_48143072_48149031_48149084_48149162_48149372_48151099_48151172_48151472_48151572_48151873_48151943_48152233_48152285_48153791_48153894_48157992_48158057_48158174_48158225_48158768_48158923_48159612_48159805_48165932_48166027_48166120_48166129_48167348_48167402_48168630_48168840_48178076
transcript_64237.known	chr15	-	2958	16	FSM	ENSG00000104177.19	ENST00000267836.10	2958	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	52.9836033336939	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGCTTATTTGTTGCTTT	-48169241	True	NA	NA	False	ATTAAA	-19	NA	48178353	48141796	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_48143072_48149031_48149084_48149162_48149372_48151472_48151572_48151873_48151943_48152233_48152285_48153791_48153894_48157992_48158057_48158174_48158225_48158768_48158923_48159612_48159805_48165932_48166027_48166120_48166129_48167348_48167402_48168630_48168840_48178076
transcript_6425.known	chr1	+	1674	12	FSM	ENSG00000162521.19	ENST00000458695.6	1674	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	523.021008379789	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGTAAGGAATAGAGCCAA	32623365	False	NA	NA	False	AGTAAA	-9	NA	32651355	32680040	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32651433_32651913_32652062_32657426_32657573_32668224_32668399_32668738_32668855_32668971_32669133_32669230_32669358_32669485_32669564_32672449_32672527_32672641_32672700_32672790_32672902_32679639
transcript_64250.known	chr15	+	635	7	FSM	ENSG00000128951.14	ENST00000559416.5	635	7	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_1	720.40235671155	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTGCTTCAAGTGTTTT	48330931	True	NA	NA	False	AAAACA	-36	NA	48331094	48342137	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_48331192_48332267_48332407_48334416_48334509_48336045_48336091_48341288_48341364_48341514_48341586_48342021
transcript_64252.known	chr15	+	2141	7	FSM	ENSG00000128951.14	ENST00000331200.8	2141	7	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_1	635.538725981527	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAATGAATTCTGTTTTG	48329640	True	NA	NA	False	AATAAA	-27	NA	48331428	48343373	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_48331796_48332267_48332407_48334416_48334509_48336045_48336091_48341288_48341364_48341514_48341586_48342021
transcript_64254.known	chr15	+	769	7	FSM	ENSG00000128951.14	ENST00000558813.5	769	7	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	713.411152297343	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTTTTTCCGCAATTG	48331377	False	NA	NA	False	ATTAAA	-45	NA	48331404	48342293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_48331480_48332267_48332407_48334416_48334509_48336045_48336091_48341288_48341364_48341514_48341586_48342021
transcript_64256.known	chr15	+	724	7	FSM	ENSG00000128951.14	ENST00000558472.5	724	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	729.972069480896	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGGTTCCACTGGAAAG	48329667	True	NA	NA	False	NA	NA	NA	48331455	48342052	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_48331727_48332267_48332407_48334416_48334509_48336045_48336091_48341288_48341364_48341514_48341586_48342021
transcript_64260.known	chr15	+	1935	6	FSM	ENSG00000128951.14	ENST00000455976.6	1935	6	0	0	0	0	multi-exon	FALSE	canonical	3	1780	junction_4	124.589566176305	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAACCAGAATGAATTCTGT	48332079	False	NA	NA	False	AATAAA	-23	NA	48332102	48343369	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_48332407_48334416_48334509_48336045_48336091_48341288_48341364_48341514_48341586_48342021
transcript_64261.known	chr15	+	569	6	FSM	ENSG00000128951.14	ENST00000559935.5	569	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	986.794487216057	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATTCTTTCTTTGAAGT	NA	False	NA	NA	False	NA	NA	NA	48331010	48341495	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_48331192_48332267_48332407_48334416_48334509_48336045_48336091_48341288_48341364_48341458
transcript_64262.known	chr15	-	4109	2	FSM	ENSG00000166147.15	ENST00000560355.1	4109	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTGACTTTCAATTCA	-48645388	True	NA	NA	False	AATAAA	-13	NA	48645721	48640988	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_48644951_48645574
transcript_64265.nic	chr15	-	3477	20	ISM	ENSG00000103995.14	ENST00000399334.7	5097	26	-99	17753	-7	13069	5prime_fragment	FALSE	canonical	3	55	junction_13	9.37640109567233	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTTCCTGAGAGTGAG	-48808736	True	NA	NA	False	NA	NA	NA	48811086	48755903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_48756554_48760134_48760267_48762390_48762673_48767059_48767193_48767334_48767464_48768218_48768329_48768955_48769082_48772486_48772692_48781195_48781360_48782138_48782231_48783972_48784121_48788800_48789002_48791236_48791377_48793320_48793462_48796009_48796161_48797300_48797580_48797660_48797731_48797947_48798052_48805562_48805657_48810960
transcript_64266.nic	chr15	-	3024	20	ISM	ENSG00000103995.14	ENST00000399334.7	5097	26	-99	18206	-7	12616	5prime_fragment	FALSE	canonical	3	55	junction_13	9.37640109567233	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAAGAAGAAATCCACAGAA	-48808736	True	NA	NA	False	AAGAAA	-2	NA	48811086	48756356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_48756554_48760134_48760267_48762390_48762673_48767059_48767193_48767334_48767464_48768218_48768329_48768955_48769082_48772486_48772692_48781195_48781360_48782138_48782231_48783972_48784121_48788800_48789002_48791236_48791377_48793320_48793462_48796009_48796161_48797300_48797580_48797660_48797731_48797947_48798052_48805562_48805657_48810960
transcript_64270.nic	chr15	-	2024	14	ISM	ENSG00000103995.14	ENST00000399334.7	5097	26	-99	30822	-7	0	5prime_fragment	FALSE	canonical	3	55	junction_7	5.94352116064057	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAACAACAAAATCAGGTG	-48808736	True	NA	NA	False	AATGAA	-11	NA	48811086	48768972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_48769082_48772486_48772692_48781195_48781360_48782138_48782231_48783972_48784121_48788800_48789002_48791236_48791377_48793320_48793462_48796009_48796161_48797300_48797580_48797660_48797731_48797947_48798052_48805562_48805657_48810960
transcript_64271.known	chr15	-	1947	13	FSM	ENSG00000103995.14	ENST00000560322.5	1947	13	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_6	6.16891850777392	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGATGAAAAAAGCATTG	NA	False	NA	NA	False	AAGAAA	-24	NA	48811146	48772514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_48772692_48781195_48781360_48782138_48782231_48783972_48784121_48788800_48789002_48791236_48791377_48793320_48793462_48796009_48796161_48797300_48797580_48797660_48797731_48797947_48798052_48805562_48805657_48810960
transcript_64273.known	chr15	-	5560	27	FSM	ENSG00000103995.14	ENST00000380950.7	5560	27	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	13.4997808441558	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGTTATGAATTATTTT	-48808719	True	NA	-1	True	AATAAA	-18	NA	48811069	48737937	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_48739289_48741600_48741705_48741946_48742101_48744239_48744344_48744895_48744993_48748442_48748611_48752348_48752470_48755902_48756554_48760134_48760267_48762390_48762673_48767059_48767193_48767334_48767464_48768218_48768329_48768955_48769082_48772486_48772692_48781195_48781360_48782138_48782231_48783972_48784121_48788800_48789002_48791236_48791377_48793320_48793462_48796009_48796161_48797300_48797580_48797660_48797731_48797947_48798052_48805562_48805657_48810960
transcript_64274.known	chr15	-	253	2	FSM	ENSG00000103995.14	ENST00000559630.1	253	2	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAACAAGTTTTATTTC	-48808726	True	NA	NA	False	AAAAAG	-16	NA	48811076	48805519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_48805657_48810960
transcript_64275.known	chr15	+	2040	1	FSM	ENSG00000255302.5	ENST00000530028.3	2040	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGACAATTCAGAGCCTTA	48854687	True	NA	7	True	AGTAAA	-20	NA	48878133	48880173	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_48878100_48880200
transcript_64277.nic	chr15	-	1650	10	ISM	ENSG00000138593.9	ENST00000559471.6	7059	18	-90	28216	-89	63	5prime_fragment	FALSE	canonical	2	4	junction_5	2.40370085030933	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGGTACATATTCATTT	-49046349	False	NA	NA	False	NA	NA	NA	49046536	49016853	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_49017016_49017547_49017629_49019417_49019553_49027364_49027481_49028143_49028169_49028452_49028683_49032964_49033101_49035333_49035659_49037590_49037770_49046275
transcript_64282.known	chr15	-	7059	18	FSM	ENSG00000138593.9	ENST00000559471.6	7059	18	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	3.06898763782249	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCCTTTCAGAAGAGAT	-49043607	True	NA	NA	False	AATAAA	-19	NA	49046446	48988637	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_48992927_48996366_48996587_48999832_48999988_49000876_49001098_49009215_49009379_49011730_49011864_49012647_49012818_49016559_49016702_49016847_49017016_49017547_49017629_49019417_49019553_49027364_49027481_49028143_49028169_49028452_49028683_49032964_49033101_49035333_49035659_49037590_49037770_49046275
transcript_64285.nic	chr15	+	2044	11	NIC	ENSG00000156958.15	novel	5299	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	21.8451367585557	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCACTGAATTGTATGCA	49155118	True	NA	7	True	ATTAAA	-22	NA	49155773	49328514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_49156017_49161739_49161862_49201161_49201251_49217189_49217314_49235850_49235942_49239220_49239368_49281986_49282086_49283565_49283719_49292326_49292538_49319603_49319806_49327951
transcript_64288.known	chr15	+	5299	10	FSM	ENSG00000156958.15	ENST00000327171.7	5299	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	13.1656117720877	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATTGTCCTTATATTGAC	49155109	True	NA	NA	False	AATAAA	-18	NA	49155764	49331882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_49156017_49201161_49201251_49217189_49217314_49235850_49235942_49239220_49239368_49281986_49282086_49283565_49283719_49292326_49292538_49319603_49319806_49327951
transcript_64289.known	chr15	+	5176	10	FSM	ENSG00000156958.15	ENST00000560031.6	5176	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	12.5766783971831	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATTGTCCTTATATTGAC	49169856	True	NA	NA	False	AATAAA	-18	NA	49170246	49331882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_49170376_49201161_49201251_49217189_49217314_49235850_49235942_49239220_49239368_49281986_49282086_49283565_49283719_49292326_49292538_49319603_49319806_49327951
transcript_64292.known	chr15	-	6576	13	FSM	ENSG00000166200.15	ENST00000388901.10	6576	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	117.353780178664	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTAAGTATTTACTGTG	-49149722	True	NA	NA	False	AATAAA	-15	NA	49155599	49122726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_49128095_49128701_49128761_49129476_49129560_49130718_49130817_49133758_49133812_49133929_49134109_49134339_49134515_49137149_49137228_49137347_49137438_49139527_49139654_49144226_49144305_49144964_49145079_49155524
transcript_64293.known	chr15	-	2036	13	FSM	ENSG00000166200.15	ENST00000299259.10	2036	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	123.946533051778	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTAGTTTGGTTCTTGATG	-49149784	True	NA	-6	True	AATAAA	-17	NA	49155661	49127349	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_49128095_49128701_49128761_49129476_49129560_49130718_49130817_49133758_49133812_49133929_49134109_49134339_49134515_49137149_49137228_49137347_49137459_49139527_49139654_49144226_49144305_49144964_49145079_49155524
transcript_64301.known	chr15	-	803	8	FSM	ENSG00000166200.15	ENST00000558843.5	803	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	127.201591570071	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGATGAATCTGGAAGTC	-49149713	True	NA	NA	False	NA	NA	NA	49155590	49134032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_49134109_49134339_49134515_49137149_49137228_49137347_49137438_49139527_49139654_49144226_49144305_49144964_49145079_49155524
transcript_64305.known	chr15	-	3316	16	FSM	ENSG00000166262.16	ENST00000299338.11	3316	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	9.56986009418227	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGCACAATTTTGTCTCT	-49620509	True	NA	-8	True	AATAAA	-43	NA	49620818	49326969	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_49328676_49331779_49331850_49335418_49335497_49367447_49367609_49371301_49371400_49508210_49508349_49541679_49541807_49568244_49568347_49575010_49575110_49576740_49576846_49577628_49577665_49588015_49588084_49589775_49590008_49611214_49611269_49615120_49615244_49620699
transcript_64311.nic	chr15	+	1192	6	NIC	ENSG00000104047.15	novel	1201	6	NA	NA	1	0	combination_of_known_junctions	TRUE	canonical	3	27	junction_2	179.446259364747	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCATATATAATGCCTGT	49617372	True	NA	22	True	AATAAA	-33	NA	49621037	49643657	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_49621123_49625112_49625432_49631000_49631059_49632158_49632303_49634535_49634795_49643330
transcript_64316.known	chr15	+	13776	6	FSM	ENSG00000104047.15	ENST00000251250.7	13776	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	186.261107051365	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTTCTTTCTTTAACC	49617433	True	NA	NA	False	AATAAA	-20	NA	49621098	49656232	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_49621123_49623670_49623799_49625112_49625432_49632158_49632303_49634535_49634795_49643330
transcript_64318.known	chr15	+	794	5	FSM	ENSG00000104047.15	ENST00000559223.5	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	188.719865144081	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTATATTTATAGATAGCAC	49617379	True	NA	NA	False	NA	NA	NA	49621044	49634730	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_49621123_49625112_49625432_49631000_49631059_49632158_49632303_49634535
transcript_64319.known	chr15	+	13699	5	FSM	ENSG00000104047.15	ENST00000403028.8	13699	5	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_4	19.4470434770944	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTTCTTTCTTTAACC	49617382	True	NA	NA	False	AATAAA	-20	NA	49621047	49656232	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_49621123_49625112_49625432_49632158_49632303_49634535_49634795_49643330
transcript_6432.known	chr1	+	762	4	FSM	ENSG00000162521.19	ENST00000401893.7	762	4	0	0	0	0	multi-exon	FALSE	canonical	3	1668	junction_1	98.3564944474944	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGGTGCTGTTTAAGCA	32623219	True	NA	NA	False	NA	NA	NA	32651209	32668579	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32651323_32651913_32652062_32657426_32657573_32668224
transcript_64323.known	chr15	+	1131	5	FSM	ENSG00000104047.15	ENST00000558653.5	1131	5	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	164.503799348222	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTAACATTAATAAACTTAT	49617399	True	NA	-25	True	NA	NA	NA	49621064	49643610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_49621194_49625112_49625432_49632158_49632303_49634535_49634795_49643330
transcript_64328.known	chr15	+	2384	10	FSM	ENSG00000140284.11	ENST00000267842.10	2384	10	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_3	7.24866952457782	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCACTGTCTCTGTGTT	50181716	True	NA	10	True	ATTAAA	-18	NA	50182195	50236385	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_50182906_50197499_50197710_50202486_50202646_50205238_50205364_50222964_50223160_50225987_50226079_50226979_50227179_50228944_50229043_50233867_50233999_50235919
transcript_6433.known	chr1	+	690	2	FSM	ENSG00000162521.19	ENST00000465780.1	690	2	0	0	0	0	multi-exon	FALSE	canonical	3	1668	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATTACAATGAGTCTAGT	32623235	True	NA	NA	False	AAAAAG	-6	NA	32651225	32652506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32651323_32651913
transcript_64330.nic	chr15	-	2764	10	NIC	ENSG00000104064.18	novel	2726	9	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_9	81.9757567294016	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATATGTTCATTGTAGAC	-50351648	True	NA	-16	True	ATTAAA	-10	NA	50355167	50277262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_50278785_50286067_50286184_50289482_50289669_50300788_50300903_50301220_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50346371_50346396_50354984
transcript_64332.nic	chr15	-	2757	10	NIC	ENSG00000104064.18	novel	4609	9	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_9	81.3498768845768	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATATGTTCATTGTAGAC	-50351677	True	NA	-16	True	ATTAAA	-10	NA	50355196	50277262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_50278785_50286067_50286184_50289482_50289669_50300788_50300903_50301256_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50346371_50346396_50354984
transcript_64334.known	chr15	-	2726	9	FSM	ENSG00000104064.18	ENST00000220429.12	2726	9	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_4	51.6690187636653	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATATGTTCATTGTAGAC	-50351634	True	NA	-16	True	ATTAAA	-10	NA	50355153	50277262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_50278785_50286067_50286184_50289482_50289669_50300788_50300903_50301220_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50354984
transcript_64335.known	chr15	-	4609	9	FSM	ENSG00000104064.18	ENST00000380877.8	4609	9	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	49.7242395618073	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTTGTCCAAAACGTGA	-50351679	True	NA	-11	True	AATAAA	-17	NA	50355198	50275388	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_50278785_50286067_50286184_50289482_50289669_50300788_50300903_50301256_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50354984
transcript_64337.known	chr15	-	1412	9	FSM	ENSG00000104064.18	ENST00000560825.5	1412	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_8	89.0118496325068	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAATGAATGAATGAGTG	-50355162	False	NA	NA	False	AATAAA	-6	NA	50355202	50285893	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_50286184_50289482_50289666_50300788_50300903_50301256_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50346371_50346396_50354984
transcript_64338.nic	chr15	-	1459	9	NIC	ENSG00000104064.18	novel	1633	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_8	85.108662161968	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAGTGAGTGAAGAATTT	-50351679	True	NA	NA	False	AATAAA	-18	NA	50355198	50285881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_50286184_50289482_50289669_50300788_50300903_50301220_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50346371_50346396_50354984
transcript_64340.known	chr15	-	1450	8	FSM	ENSG00000104064.18	ENST00000543881.5	1450	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	86.2054972440971	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAATGAGTTGATAAAGAT	-50351605	True	NA	NA	False	TTTAAA	-38	NA	50355124	50278401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_50278785_50286067_50286184_50289482_50289669_50300788_50300903_50301220_50301369_50302928_50303124_50303965_50304134_50354984
transcript_64342.known	chr15	-	1392	8	FSM	ENSG00000104064.18	ENST00000429662.6	1392	8	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_3	44.7172522977567	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGAGTGAAGAATTTGT	-50351634	True	NA	NA	False	AATAAA	-20	NA	50355153	50285879	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_50286184_50289482_50289669_50300788_50300903_50301220_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50354984
transcript_64343.known	chr15	-	1401	8	FSM	ENSG00000104064.18	ENST00000396464.7	1401	8	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_3	41.7284711692443	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGAGTGAAGAATTTGT	-50351679	True	NA	NA	False	AATAAA	-20	NA	50355198	50285879	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_50286184_50289482_50289669_50300788_50300903_50301256_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50354984
transcript_6435.known	chr1	+	5293	7	FSM	ENSG00000162522.11	ENST00000373481.7	5293	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	12.2292908852294	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGCTACTGCTTCTTA	32747254	True	NA	21	True	ATTAAA	-14	NA	32754020	32774970	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32754181_32767786_32767958_32768061_32768118_32768651_32768776_32769672_32769787_32769879_32772442_32772864
transcript_64350.known	chr15	+	2277	3	FSM	ENSG00000244879.9	ENST00000648591.1	2277	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	32	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCTCATCTCACTTTCAG	50353302	True	NA	NA	False	AATATA	-3	NA	50355475	50372158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_50355766_50356099_50356258_50370329
transcript_64353.known	chr15	+	709	2	FSM	ENSG00000244879.9	ENST00000560359.1	709	2	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATAGGCTGTGTTTTCTTTT	50355293	False	NA	10	True	ATTAAA	-36	NA	50355327	50356370	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_50355766_50356099
transcript_64355.known	chr15	+	16182	2	FSM	ENSG00000244879.9	ENST00000499624.3	16182	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGCACTTGTCTTTGTCCT	50353293	True	NA	NA	False	CATAAA	-17	NA	50355466	50372202	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_50355546_50356099
transcript_64358.known	chr15	+	1076	1	FSM	ENSG00000244879.9	ENST00000619314.1	1076	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTATGAACTTAATCTAG	50354071	True	NA	NA	False	AAGAAA	-43	NA	50354958	50356034	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_50355000_50356000
transcript_64360.nic	chr15	+	4412	21	NIC	ENSG00000138592.14	novel	18865	20	NA	NA	-8	78	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	77.4897412565044	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTATAACCCTGTGGGT	50418235	True	NA	NA	False	ATTAAA	-17	NA	50424371	50499773	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_50424515_50432337_50432500_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480_50482066_50484274_50484362_50489800_50489882_50490262_50490526_50492700_50492914_50494069_50494281_50495847_50496085_50497088_50497232_50498595_50498729_50498902
transcript_64363.known	chr15	+	19026	20	FSM	ENSG00000138592.14	ENST00000396444.7	19026	20	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	60.6823617740024	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGCAGTGTCTCATACCT	50418245	True	NA	NA	False	AATAAA	-15	NA	50424381	50514419	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_50424655_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480_50482066_50484274_50484362_50489800_50489882_50490262_50490526_50492700_50492914_50494069_50494281_50495847_50496085_50497088_50497232_50498595_50498729_50498902
transcript_64365.known	chr15	+	18865	20	FSM	ENSG00000138592.14	ENST00000307179.9	18865	20	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	54.2516961706832	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCAGTGTCTCATACCTGT	50418268	True	NA	NA	False	AATAAA	-17	NA	50424404	50514421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_50424515_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480_50482066_50484274_50484362_50489800_50489882_50490262_50490526_50492700_50492914_50494069_50494281_50495847_50496085_50497088_50497232_50498595_50498729_50498902
transcript_6437.known	chr1	+	878	5	FSM	ENSG00000162522.11	ENST00000294521.7	878	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	23.7841859225831	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAGTTGGGAGCAGGACA	32764639	True	NA	NA	False	NA	NA	NA	32765633	32773197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32765828_32767786_32767958_32768061_32768118_32768651_32768776_32772864
transcript_64377.known	chr15	+	1917	12	FSM	ENSG00000138592.14	ENST00000559329.5	1917	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	91.4314989938613	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTCGGGAAAGGCAGCA	50418268	True	NA	-15	True	AAGAAA	-3	NA	50424404	50481702	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_50424655_50432337_50432500_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480
transcript_6438.known	chr1	+	684	4	FSM	ENSG00000162522.11	ENST00000468130.1	684	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	2.05480466765633	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGAGTTAGAAAATCTTG	32747252	True	NA	58	True	TATAAA	-5	NA	32754018	32768946	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32754181_32767786_32767958_32768061_32768118_32768651
transcript_64382.nic	chr15	+	1943	12	NIC	ENSG00000138592.14	novel	1917	12	NA	NA	-8	130	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	85.0769219273247	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAGAAGAAAGAAAGTGAA	50418235	True	NA	118	True	AAAAAG	-13	NA	50424371	50481835	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_50424515_50432337_50432500_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480
transcript_64388.nic	chr15	+	1638	11	ISM	ENSG00000138592.14	ENST00000307179.9	18865	20	-23	32719	0	0	5prime_fragment	FALSE	canonical	3	121	junction_1	47.6849032713709	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTCGGGAAAGGCAGCA	50418245	True	NA	-15	True	AAGAAA	-3	NA	50424381	50481702	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_50424515_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480
transcript_64389.nic	chr15	+	1716	11	ISM	ENSG00000138592.14	ENST00000307179.9	18865	20	-23	32641	0	75	5prime_fragment	FALSE	canonical	3	121	junction_1	47.6849032713709	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAGAAGCTGAAGAAAATGA	50418245	True	NA	63	True	AAAAAG	-12	NA	50424381	50481780	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_50424515_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480
transcript_64390.nic	chr15	+	1771	11	ISM	ENSG00000138592.14	ENST00000307179.9	18865	20	-23	32586	0	130	5prime_fragment	FALSE	canonical	3	121	junction_1	47.6849032713709	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAGAAGAAAGAAAGTGAA	50418245	True	NA	118	True	AAAAAG	-13	NA	50424381	50481835	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_50424515_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480
transcript_64398.known	chr15	+	652	5	FSM	ENSG00000138592.14	ENST00000560297.5	652	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	121.929026486723	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTGTCGAAGAAGCTGAAA	50418243	True	NA	NA	False	NA	NA	NA	50424379	50449440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_50424515_50432337_50432500_50439008_50439178_50441348_50441494_50449399
transcript_64399.known	chr15	+	582	4	FSM	ENSG00000138592.14	ENST00000560954.5	582	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	121.94078708765	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGGATTCCAAAGACAAAA	50418245	True	NA	NA	False	NA	NA	NA	50424381	50459134	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_50424515_50439008_50439178_50441348_50441494_50458999
transcript_64402.nic	chr15	-	2091	16	ISM	ENSG00000092439.16	ENST00000560955.5	7218	39	-49	52503	-23	-8849	5prime_fragment	FALSE	canonical	3	56	junction_4	5.72091678744665	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACCAAAGATGAAATTGTA	-50681741	True	NA	19	True	AAGAAA	-2	NA	50686820	50612795	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_50612830_50613706_50613842_50614122_50614264_50619744_50619799_50624165_50624301_50628148_50628250_50631416_50631490_50632868_50632993_50634381_50634557_50637421_50637594_50639423_50639549_50643339_50643554_50648686_50648886_50657780_50657820_50662966_50663047_50686530
transcript_64411.known	chr15	-	7270	15	FSM	ENSG00000138600.10	ENST00000261854.10	7270	15	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_4	18.3871350322414	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAATTTGTTTTATTTTG	-50761550	True	NA	-14	True	AATAAA	-19	NA	50765706	50702265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_50707875_50719939_50720101_50722123_50722202_50725220_50725324_50726320_50726378_50730964_50731040_50732602_50732685_50736100_50736203_50736643_50736741_50739679_50739829_50747494_50747629_50748112_50748203_50748687_50748871_50749635_50749747_50765467
transcript_64414.known	chr15	+	6743	21	FSM	ENSG00000081014.11	ENST00000261842.10	6743	21	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	6.01061560907034	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTTTTGGTCTATGTTC	50907621	True	NA	3	True	AATAAA	-17	NA	50908682	51005895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_50908929_50912077_50912150_50915447_50915572_50923930_50924005_50925097_50925220_50929008_50929169_50930804_50930972_50934623_50934698_50941441_50941565_50941665_50941776_50948019_50948160_50949825_50949939_50950050_50950170_50958491_50958795_50968262_50968378_50984021_50984146_50993369_50993626_50997325_50997884_50999071_50999263_51001025_51001184_51002501
transcript_64416.known	chr15	+	3160	12	FSM	ENSG00000104112.9	ENST00000220478.8	3160	12	0	0	0	0	multi-exon	TRUE	canonical	3	524	junction_5	37.2323506360302	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGGGTCCGTGCCATC	51681444	True	NA	20	True	AATAAA	-16	NA	51681502	51721026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_51681838_51682516_51682570_51683078_51683125_51683218_51683435_51688259_51688403_51689218_51689369_51692158_51692337_51695874_51695992_51699318_51699403_51701106_51701245_51713332_51713414_51719407
transcript_64428.known	chr15	-	1277	3	FSM	ENSG00000140280.14	ENST00000267838.7	1277	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	3.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTAAATGCTGACAGCTT	-51737381	True	NA	47	True	AATAAA	-19	NA	51737655	51723010	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_51723650_51724789_51725122_51737349
transcript_64429.known	chr15	-	1228	3	FSM	ENSG00000140280.14	ENST00000454181.6	1228	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	13.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGAGTCTCCTTTTTTTTT	NA	False	NA	-11	True	AATAAA	-41	NA	51751585	51723068	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_51723650_51724789_51725122_51751270
transcript_64433.known	chr15	+	8232	10	FSM	ENSG00000138594.14	ENST00000308580.12	8232	10	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_7	31.3538152127466	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGACTTTTTGAAAAAGC	51818758	True	NA	30	True	AATAAA	-22	NA	51829652	51915725	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_51829837_51862810_51863011_51869216_51869374_51887588_51887712_51889055_51889146_51893814_51893946_51896418_51896527_51900154_51900299_51901891_51902037_51908775
transcript_64442.nic	chr15	+	565	3	ISM	ENSG00000138594.14	ENST00000308580.12	8232	10	-25	46353	0	6389	5prime_fragment	FALSE	canonical	3	379	junction_2	1.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAGCCCCAGAATTTTAA	NA	False	NA	NA	False	CATAAA	-40	NA	51829627	51869372	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_51829837_51862810_51863011_51869216
transcript_64443.nnic	chr15	-	1236	9	NNC	ENSG00000259556.2	novel	1041	9	NA	NA	-5571	110	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	3.86490620843508	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCACGATGTTAGAAAATT	-51936014	True	NA	NA	False	AATAAA	-17	NA	51936198	51918962	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_-_51919144_51922715_51922909_51924039_51924179_51925744_51925882_51926777_51926871_51928206_51928294_51929332_51929479_51930528_51930624_51936033
transcript_64445.nic	chr15	+	2332	7	NIC	ENSG00000069956.14	novel	5330	6	NA	NA	5	-3067	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	266.299121707568	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTGATAAGAAAGGCAAATC	52011417	True	NA	-17	True	AAGAAA	-3	NA	52019213	52064292	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_52019377_52042753_52042834_52045829_52047016_52049992_52050138_52058632_52058798_52061298_52061501_52063901
transcript_64448.known	chr15	+	5288	6	FSM	ENSG00000069956.14	ENST00000680652.1	5288	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	236.512663508743	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGTGCCAATTACTTT	52011454	True	NA	-10	True	AATAAA	-3	NA	52019250	52067359	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_52019383_52045829_52047016_52049992_52050138_52058632_52058798_52061298_52061501_52063901
transcript_64454.nic	chr15	+	297	2	ISM	ENSG00000069956.14	ENST00000261845.7	5330	6	7	21400	-3	-78	5prime_fragment	FALSE	canonical	3	491	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGCAAAACGGAAATAGTG	52011429	True	NA	NA	False	AATAAA	-24	NA	52019225	52045975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_52019377_52045829
transcript_64457.known	chr15	-	2165	12	FSM	ENSG00000166477.13	ENST00000299601.10	2165	12	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_8	43.9830921684028	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCTATGTTTAAGAAATC	-51964690	True	NA	-2	True	AATAAA	-16	NA	51971778	51938024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_51938261_51947291_51947390_51949807_51949995_51951843_51951980_51953128_51953264_51954480_51954576_51958741_51958827_51959898_51960045_51960638_51960734_51962388_51962494_51965748_51966505_51971687
transcript_64458.nnic	chr15	-	2226	12	NNC	ENSG00000166477.13	novel	2165	12	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	146.353133445859	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCTATGTTTAAGAAATC	-51964726	True	NA	-2	True	AATAAA	-16	NA	51971814	51938024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_-_51938286_51947291_51947390_51949807_51949995_51951843_51951980_51953128_51953264_51954480_51954576_51958741_51958827_51959898_51960045_51960638_51960734_51962388_51962494_51965748_51966505_51971687
transcript_64464.nic	chr15	-	1672	9	ISM	ENSG00000166477.13	ENST00000299601.10	2165	12	-36	13827	-36	1363	5prime_fragment	FALSE	canonical	3	485	junction_5	37.1969000724523	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAAGGTATGTTTGCTA	-51964726	True	NA	-5	True	NA	NA	NA	51971814	51951851	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_51951980_51953128_51953264_51954480_51954576_51958741_51958827_51959898_51960045_51960638_51960734_51962388_51962494_51965748_51966505_51971687
transcript_64465.nic	chr15	-	1353	7	ISM	ENSG00000166477.13	ENST00000299601.10	2165	12	-36	16512	-36	-1322	5prime_fragment	FALSE	canonical	3	485	junction_3	33.1381787201543	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGGAAATGAAATTAAAGA	-51964726	True	NA	NA	False	NA	NA	NA	51971814	51954536	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_51954576_51958741_51958827_51959898_51960045_51960638_51960734_51962388_51962494_51965748_51966505_51971687
transcript_64467.nic	chr15	-	501	2	ISM	ENSG00000166477.13	ENST00000299601.10	2165	12	-36	28106	-36	-12916	5prime_fragment	FALSE	canonical	3	576	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGGGCAGAGAAGATAAAAG	-51964726	True	NA	NA	False	AAAAAG	-21	NA	51971814	51966130	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_51966505_51971687
transcript_64468.known	chr15	-	1249	2	FSM	ENSG00000137875.4	ENST00000260442.3	1249	2	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTTGTCTTTCCTAATT	NA	False	NA	NA	False	AATAAA	-20	NA	52112775	52109262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_52109974_52112237
transcript_6447.known	chr1	-	2443	13	FSM	ENSG00000134684.12	ENST00000373477.9	2443	13	0	0	0	0	multi-exon	FALSE	canonical	3	1058	junction_4	71.7431278164598	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGATGTGAGCTGGAC	-32797092	True	NA	-12	True	AATAAA	-16	NA	32817358	32775238	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32776092_32779381_32779524_32780084_32780279_32781047_32781146_32782403_32782540_32786361_32786448_32786939_32787076_32791161_32791255_32797762_32797844_32806481_32806612_32810590_32810767_32810910_32811058_32817187
transcript_64473.known	chr15	-	6977	41	FSM	ENSG00000128833.13	ENST00000261839.12	6977	41	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_22	11.6816094781498	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTGGGTCAGATTCTTT	-52293154	True	NA	NA	False	AATAAA	-14	NA	52295804	52192321	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_52194055_52195376_52195458_52196308_52196484_52204864_52205148_52205815_52205967_52208553_52208644_52211729_52211885_52213187_52213287_52214602_52214691_52218518_52218688_52219758_52219823_52221161_52221256_52223543_52223725_52224900_52224982_52225074_52225139_52225438_52225533_52229132_52229314_52232621_52232686_52235669_52235764_52237481_52237647_52239732_52239880_52242047_52242214_52244355_52244568_52245353_52245466_52245955_52246043_52246916_52247015_52247457_52247593_52248699_52248784_52251389_52251516_52253316_52253458_52256638_52256721_52260861_52261128_52264189_52264297_52269752_52269861_52271762_52271845_52272579_52272724_52275561_52275719_52278872_52279018_52279508_52279675_52282781_52282893_52295609
transcript_64485.nic	chr15	-	2997	13	ISM	ENSG00000128833.13	ENST00000261839.12	6977	41	-3	57904	-3	765	5prime_fragment	FALSE	canonical	3	39	junction_3	12.7442797625706	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAGTTTTTAGTGCTTAG	-52293157	True	NA	NA	False	AAAAAG	-23	NA	52295807	52250225	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_52251516_52253316_52253458_52256638_52256721_52260861_52261128_52264189_52264297_52269752_52269861_52271762_52271845_52272579_52272724_52275561_52275719_52278872_52279018_52279508_52279675_52282781_52282893_52295609
transcript_64487.known	chr15	-	2129	13	FSM	ENSG00000128833.13	ENST00000559459.5	2129	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	20.45370789531	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGATAATGGGTTATCTTC	-52293094	True	NA	NA	False	ATTAAA	-38	NA	52295744	52250990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_52251516_52253316_52253458_52256638_52256721_52260901_52261128_52264189_52264297_52269752_52269861_52271762_52271845_52272579_52272724_52275561_52275719_52278872_52279018_52279508_52279675_52282781_52282893_52295609
transcript_64489.nic	chr15	-	2232	13	ISM	ENSG00000128833.13	ENST00000261839.12	6977	41	-3	58669	-3	0	5prime_fragment	FALSE	canonical	3	39	junction_3	12.7442797625706	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGATAATGGGTTATCTTC	-52293157	True	NA	NA	False	ATTAAA	-38	NA	52295807	52250990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_52251516_52253316_52253458_52256638_52256721_52260861_52261128_52264189_52264297_52269752_52269861_52271762_52271845_52272579_52272724_52275561_52275719_52278872_52279018_52279508_52279675_52282781_52282893_52295609
transcript_64510.known	chr15	-	1735	11	FSM	ENSG00000069966.19	ENST00000358784.11	1735	11	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_6	17.9454729667401	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTCTATTGTCTTTT	NA	False	NA	-6	True	NA	NA	NA	52180001	52122205	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_52122769_52124472_52124640_52125947_52126045_52128195_52128245_52133377_52133470_52135612_52135757_52141139_52141273_52147458_52147536_52149883_52149926_52153939_52154077_52179767
transcript_64525.known	chr15	+	2554	3	FSM	ENSG00000259577.2	ENST00000654724.1	2554	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTCAGGAGTTCAAGAC	52179899	True	NA	NA	False	NA	NA	NA	52180027	52206915	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_52180402_52181049_52181203_52204888
transcript_64526.known	chr15	-	918	3	FSM	ENSG00000069966.19	ENST00000560116.1	918	3	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_1	1.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAATTCCTATATTTATT	-52175395	True	NA	NA	False	AATAAA	-18	NA	52179900	52149277	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_52149926_52153939_52154077_52179767
transcript_64528.known	chr15	+	1972	2	FSM	ENSG00000259577.2	ENST00000560518.1	1972	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACATCACTGAGAATCTG	52180088	False	NA	NA	False	AATAAA	-20	NA	52180216	52205874	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_52181203_52204888
transcript_64529.nic	chr15	-	3388	22	ISM	ENSG00000197535.16	ENST00000685053.1	4266	29	-22	21459	-4	-255	5prime_fragment	FALSE	canonical	3	52	junction_16	10.2685041204037	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAGCAGGTAGGAATAATG	-52528219	True	NA	NA	False	AAGAAA	-1	NA	52529136	52370176	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_52370418_52372123_52372364_52375303_52375461_52376346_52376559_52379624_52379734_52379821_52379909_52383090_52383189_52384160_52384323_52387828_52387913_52389237_52389364_52391929_52392071_52396315_52396398_52397200_52397467_52405286_52405394_52407291_52407400_52408058_52408141_52410332_52410477_52416144_52416302_52425829_52425975_52428397_52428570_52433174_52433286_52528779
transcript_64530.known	chr15	-	12225	41	FSM	ENSG00000197535.16	ENST00000399231.8	12227	41	0	2	0	0	multi-exon	FALSE	canonical	0	0	junction_12	23.2018183554652	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTTTGTCAGTGTCTTA	-52529021	False	NA	NA	False	AATAAA	-15	NA	52529050	52307282	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_52313849_52314122_52314204_52317047_52317223_52319059_52319343_52321358_52321510_52323354_52323445_52327851_52328007_52330352_52330500_52336462_52336557_52340195_52340395_52343116_52343198_52346360_52346462_52348817_52348827_52351253_52351482_52353604_52353659_52353870_52354015_52359967_52360082_52364553_52364703_52367030_52367125_52370168_52370418_52372123_52372364_52375303_52375461_52376346_52376559_52379624_52379734_52379821_52379909_52383090_52383189_52384160_52384323_52387828_52387913_52389237_52389364_52391929_52392071_52396315_52396398_52397200_52397467_52405286_52405394_52407291_52407400_52408058_52408141_52410332_52410477_52416144_52416302_52425829_52425975_52428397_52428570_52433174_52433286_52528779
transcript_64535.known	chr15	-	745	4	FSM	ENSG00000128989.11	ENST00000567669.5	745	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	714.238211118827	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGTTACTCTTATTTAA	-52569144	False	NA	NA	False	TTTAAA	-45	NA	52569167	52551593	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_52552105_52557099_52557223_52568847_52568903_52569111
transcript_64538.known	chr15	-	718	4	FSM	ENSG00000128989.11	ENST00000564163.5	718	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	702.431174959907	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTAGAGCAACATAAGTAAA	-52546084	True	NA	NA	False	NA	NA	NA	52569015	52551734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_52552105_52557099_52557223_52564189_52564247_52568847
transcript_64541.known	chr15	-	5366	3	FSM	ENSG00000128989.11	ENST00000249822.9	5366	3	0	0	0	0	multi-exon	FALSE	canonical	3	1543	junction_1	60.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTTTCATCTTATTTGT	-52546099	True	NA	-8	True	ATTAAA	-17	NA	52569030	52547044	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_52552105_52557099_52557223_52568847
transcript_64542.known	chr15	-	955	3	FSM	ENSG00000128989.11	ENST00000563277.5	955	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	761	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTGGTGTAACTTATGT	NA	False	NA	NA	False	NA	NA	NA	52569209	52551366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_52552105_52557099_52557223_52569115
transcript_64550.known	chr15	-	4217	13	FSM	ENSG00000047346.13	ENST00000261844.11	4217	13	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_12	7.01338006955277	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACGTGTACTTGGCTTTT	-52678221	False	402	NA	False	AATATA	-16	NA	52678623	52581320	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_52582308_52584744_52584945_52587150_52587220_52593577_52593737_52600126_52600236_52601085_52601166_52605132_52605247_52608567_52610384_52611129_52611256_52611574_52611778_52613672_52613858_52678005_52678123_52678571
transcript_64551.known	chr15	-	4726	13	FSM	ENSG00000047346.13	ENST00000619572.5	4726	13	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_12	6.84754619472471	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACGTGTACTTGGCTTTT	-52678986	True	NA	NA	False	AATATA	-16	NA	52679388	52581320	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_52582308_52584744_52584945_52587150_52587220_52593577_52593737_52600126_52600236_52601085_52601166_52605132_52605247_52608567_52610384_52611129_52611256_52611574_52611778_52613672_52613858_52678005_52678123_52678827
transcript_64560.known	chr15	-	4352	2	FSM	ENSG00000169856.9	ENST00000305901.7	4352	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATCCAACTACATGTTAC	-52789341	True	NA	NA	False	NA	NA	NA	52790336	52755052	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_52757848_52788779
transcript_64565.known	chr15	-	2130	3	FSM	ENSG00000259203.3	ENST00000660503.2	2211	3	0	81	0	-77	multi-exon	TRUE	canonical	2	7	junction_1	53.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTGTCATCAGTCAGAG	-52805239	False	NA	-78	True	NA	NA	NA	52805251	52802564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_52803848_52804208_52804298_52804493
transcript_64566.known	chr15	-	959	3	FSM	ENSG00000259203.3	ENST00000654059.2	1337	3	376	2	279	-2	multi-exon	FALSE	canonical	3	56	junction_1	29	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTTTTCCAGAATCCA	-52804601	False	NA	-12	True	AATAAA	-16	NA	52804613	52800167	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_52800918_52804208_52804298_52804493
transcript_6457.known	chr1	-	2248	12	FSM	ENSG00000134684.12	ENST00000675785.1	2248	12	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_11	328.569476407116	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTCCATAAGGCATCTCA	-32797114	True	NA	-82	True	AATGAA	-39	NA	32817380	32775308	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32776092_32779381_32779524_32780084_32780279_32781047_32781146_32782403_32782540_32786361_32786448_32786939_32787076_32791161_32791255_32797762_32797844_32806481_32806612_32810590_32810767_32817187
transcript_64570.nic	chr15	-	2591	2	ISM	ENSG00000259203.3	ENST00000560818.1	572	3	-20	562	-20	308	5prime_fragment	FALSE	canonical	3	114	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCCTAAAATGTCCAGATA	-52804950	False	NA	NA	False	ATTAAA	-28	NA	52804962	52802175	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_52804298_52804493
transcript_64571.nic	chr15	-	2283	2	ISM	ENSG00000259203.3	ENST00000560818.1	572	3	-20	870	-20	0	5prime_fragment	FALSE	canonical	3	114	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATAGAGATGTGTTCATT	-52804950	False	NA	3	True	AATAAA	-23	NA	52804962	52802483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_52804298_52804493
transcript_64573.known	chr15	-	4333	3	FSM	ENSG00000166415.15	ENST00000567224.1	4333	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	41	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGTTTTTTGTTTGTTT	-53540332	True	NA	NA	False	ATTAAA	-16	NA	53541103	53513740	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_53517755_53523217_53523323_53540889
transcript_64574.known	chr15	-	4224	3	FSM	ENSG00000166415.15	ENST00000614174.4	4224	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	26.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTACTGTTTTTTGTTTGTT	-53540309	True	NA	NA	False	ATTAAA	-15	NA	53541080	53513741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_53517755_53523217_53523323_53540974
transcript_64578.known	chr15	-	1395	6	FSM	ENSG00000137876.11	ENST00000677730.1	1395	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	795.440657748898	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGATATTTATTCTTTA	-55179700	True	NA	-1	True	AATAAA	-16	NA	55196958	55181314	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_55182220_55183310_55183401_55185361_55185426_55190974_55191048_55192719_55192834_55196809
transcript_64582.known	chr15	-	1540	6	FSM	ENSG00000137876.11	ENST00000677147.1	1540	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	791.179625622399	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTACAGTTTTAAGTATG	-55179679	True	NA	20	True	ATTAAA	-43	NA	55196937	55181159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_55182226_55183314_55183401_55185361_55185426_55190974_55191048_55192710_55192834_55196809
transcript_64588.known	chr15	-	3447	7	FSM	ENSG00000069974.16	ENST00000336787.6	3447	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_6	9.38083151964686	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTGTGAACGTAACTG	-55289250	True	NA	3	True	AATAAA	-22	NA	55289813	55202965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_55205706_55223888_55224013_55228608_55228713_55230400_55230487_55234781_55234957_55270164_55270285_55289715
transcript_64603.known	chr15	+	1668	12	FSM	ENSG00000069943.10	ENST00000539642.5	1668	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	14.6851248738982	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTCCTAGATAAATTAAC	55318997	False	NA	NA	False	NA	NA	NA	55319250	55355432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_55319414_55320274_55320411_55321269_55321391_55327530_55327636_55329723_55329855_55333866_55334008_55339266_55339319_55340611_55340824_55341737_55341803_55350698_55350913_55354797_55354979_55355285
transcript_64606.known	chr15	-	3553	9	FSM	ENSG00000260916.8	ENST00000442196.8	3553	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	19.4164878389476	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGTTTCAGTCAATTTT	-55406692	True	NA	-20	True	AATAAA	-33	NA	55408359	55355238	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_55356410_55359538_55360945_55365187_55365310_55371792_55372045_55376948_55377151_55378299_55378377_55385599_55385715_55389364_55389434_55408220
transcript_64607.known	chr15	-	2970	8	FSM	ENSG00000260916.8	ENST00000569205.5	2970	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	25.0534123302147	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAAAGAGGCAAACTAAGC	-55406385	False	20	NA	False	GATAAA	-9	NA	55408052	55359017	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_55360945_55365187_55365310_55371792_55372045_55376948_55377151_55378299_55378377_55385599_55385715_55389364_55389434_55407846
transcript_64608.known	chr15	-	6822	8	FSM	ENSG00000260916.8	ENST00000310958.10	6822	8	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_4	7.90504876128967	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGCTGAGTACTGTTT	NA	False	NA	-31	True	AATAAA	-22	NA	55408510	55355249	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_55360945_55365187_55365310_55371792_55372045_55376948_55377151_55378299_55378377_55385599_55385715_55389364_55389434_55408220
transcript_64613.known	chr15	+	868	2	FSM	ENSG00000261652.3	ENST00000569691.2	868	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCAAAAGCCTTTCATAT	NA	False	NA	92	True	AATAAA	-35	NA	55408494	55418798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_55408787_55418222
transcript_64614.known	chr15	-	944	2	FSM	ENSG00000225973.4	ENST00000436697.3	944	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGTTAATTTTAATGTTT	-55317702	True	NA	0	True	AATAAA	-27	NA	55319123	55317183	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_55317868_55318863
transcript_64615.known	chr15	-	801	2	FSM	ENSG00000225973.4	ENST00000567948.1	801	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGCAAAAAAACCCACAAATA	-55317740	True	NA	NA	False	AAAACA	-4	NA	55319161	55317321	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_55317868_55318906
transcript_64618.known	chr15	-	371	2	FSM	ENSG00000225973.4	ENST00000565225.1	371	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGTATGCCAAAGATCAGA	-55317686	True	NA	-17	True	NA	NA	NA	55319107	55317703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_55317868_55318900
transcript_64619.known	chr15	-	2866	7	FSM	ENSG00000260916.8	ENST00000568808.5	2866	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	37.348583194904	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACTGATTCTGGTGTCT	-55406612	True	NA	NA	False	AATAAA	-22	NA	55408279	55358838	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_55360945_55371792_55372031_55376948_55377151_55378299_55378377_55385599_55385715_55389364_55389434_55408220
transcript_64622.known	chr15	-	5735	29	FSM	ENSG00000069869.17	ENST00000435532.8	5735	29	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	4.72617548276379	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAACTGTGGTTCATTATA	-55993069	True	NA	NA	False	AATAAA	-28	NA	55993612	55826921	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_55830000_55830513_55830587_55833007_55833105_55834037_55834146_55834226_55834287_55837788_55837850_55838106_55838181_55838508_55838605_55840446_55840518_55840605_55840728_55841933_55842164_55846968_55847035_55848371_55848431_55848520_55848576_55848805_55848887_55850541_55850743_55852423_55852544_55856130_55856197_55860406_55860575_55860660_55860779_55862912_55863080_55869578_55869682_55872414_55872477_55873957_55874009_55924645_55924700_55951375_55951415_55951510_55951590_55966472_55966547_55993510
transcript_64630.known	chr15	+	1433	13	FSM	ENSG00000151575.14	ENST00000352903.6	1433	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	17.1601929541081	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACAGGACATTGTTTGTG	56364419	True	NA	NA	False	ATTAAA	-17	NA	56365426	56445874	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_56365478_56365578_56365671_56373440_56373505_56383951_56384032_56388471_56388521_56389317_56389401_56391242_56391419_56394164_56394248_56394660_56394835_56412301_56412437_56427604_56427740_56428366_56428474_56445670
transcript_64631.known	chr15	+	2297	9	FSM	ENSG00000151575.14	ENST00000561221.6	2297	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_6	10.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCACTTAGACAAAATTTAT	56364438	True	NA	NA	False	AATAAA	-14	NA	56365445	56396298	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_56365478_56365578_56365671_56373440_56373505_56383951_56384032_56388471_56388521_56389317_56389401_56391242_56391419_56394164_56394248_56394660
transcript_64636.known	chr15	-	2030	10	FSM	ENSG00000138587.6	ENST00000260453.4	2030	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_9	9.98888270918113	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTTTTTTGGTCTACTG	-56464384	True	NA	-2	True	AATAAA	-22	NA	56465137	56428723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_56429194_56431372_56431499_56434137_56434396_56443429_56443538_56443637_56443855_56444443_56444674_56446840_56446944_56456393_56456522_56464025_56464248_56464969
transcript_64640.known	chr15	-	584	2	FSM	ENSG00000138587.6	ENST00000558694.1	584	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGAGTCTTGCTCTGTCG	-56464332	True	NA	NA	False	NA	NA	NA	56465085	56463779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_56464248_56464969
transcript_64645.known	chr15	-	4399	22	FSM	ENSG00000137871.21	ENST00000267807.12	4399	22	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	17.1092262707221	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATTTTTCCAATCACTG	-56731652	True	NA	44	True	AATAAA	-18	NA	56733509	56630175	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_56632123_56635194_56635251_56642951_56642998_56654197_56654235_56654384_56654504_56658423_56658487_56666394_56666536_56666678_56666987_56668822_56668958_56676669_56676817_56677573_56677675_56678663_56678822_56682253_56682478_56689040_56689151_56689299_56689471_56693097_56693216_56700932_56701073_56701172_56701239_56704120_56704268_56707081_56707151_56707262_56707307_56733457
transcript_64648.known	chr15	-	3666	6	FSM	ENSG00000137871.21	ENST00000558320.5	3666	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	12.0332871651931	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATATTCTCTGTTTTA	-56731637	True	NA	NA	False	AATAAA	-9	NA	56733494	56697762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_56701073_56701172_56701239_56704120_56704268_56707081_56707144_56707262_56707307_56733457
transcript_64654.known	chr15	-	1441	2	FSM	ENSG00000285331.2	ENST00000560587.1	1441	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGCATAGAGATCTGAT	-56917265	True	NA	-17	True	AATAAA	-19	NA	56918493	56916725	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_56917213_56917539
transcript_64656.known	chr15	+	596	2	FSM	ENSG00000276524.1	ENST00000621974.1	596	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTTCCAGGCTCTG	56887022	False	NA	38	True	AATAAA	-15	NA	56887106	56888219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_56887171_56887687
transcript_64660.known	chr15	+	6114	21	FSM	ENSG00000140262.18	ENST00000333725.10	6114	21	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_14	47.8869502056667	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCAGGATGATTCCTCTT	56912472	True	NA	NA	False	AATAAA	-37	NA	56918643	57289853	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_56918907_56919891_56919989_56921025_56921099_57063749_57063824_57091788_57091892_57166401_57166467_57192157_57192294_57197772_57197826_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57252420_57252493_57253261_57253469_57262093_57262209_57263111_57263275_57273029_57273263_57282444_57282599_57286156
transcript_64663.known	chr15	+	4076	20	FSM	ENSG00000140262.18	ENST00000557843.5	4076	20	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	68.7131417188542	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTTGAATTCTAAATATT	56918766	False	NA	NA	False	AAGAAA	-2	NA	56918831	57288085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_56918907_56919901_56919989_56921025_56921099_57063749_57063824_57091788_57091892_57166401_57166467_57192157_57192294_57197772_57197826_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57253261_57253469_57262093_57262209_57263111_57263275_57273029_57273263_57282444_57282599_57286156
transcript_6467.known	chr1	-	2075	11	FSM	ENSG00000134684.12	ENST00000674629.1	2075	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	348.299885156455	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCATCACTGTCATAAAT	-32797091	True	NA	-56	True	NA	NA	NA	32817357	32775282	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32776092_32779381_32779524_32780084_32780279_32781047_32781146_32782403_32782540_32786361_32786448_32786939_32787076_32791161_32791255_32797762_32797844_32806481_32806612_32817187
transcript_64670.nic	chr15	+	2367	19	ISM	ENSG00000140262.18	ENST00000267811.9	6061	20	-125	7377	-123	0	5prime_fragment	FALSE	canonical	3	122	junction_14	37.297808825853	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAGAAGGGAAGAAGAAAA	NA	False	NA	3	True	NA	NA	NA	56918499	57282476	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_56918907_56919891_56919989_56921025_56921099_57063749_57063824_57091788_57091892_57166401_57166467_57192157_57192294_57197772_57197826_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57253261_57253469_57262093_57262209_57263111_57263275_57273029_57273263_57282444
transcript_64673.nic	chr15	+	2057	18	ISM	ENSG00000140262.18	ENST00000333725.10	6114	21	-77	26629	-56	0	5prime_fragment	FALSE	canonical	3	125	junction_14	44.3637839765695	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGAATCCTCCCAAAAAGA	56918531	False	NA	NA	False	NA	NA	NA	56918566	57263224	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_56918907_56919891_56919989_56921025_56921099_57063749_57063824_57091788_57091892_57166401_57166467_57192157_57192294_57197772_57197826_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57252420_57252493_57253261_57253469_57262093_57262209_57263111
transcript_64679.nic	chr15	+	1940	17	ISM	ENSG00000140262.18	ENST00000333725.10	6114	21	-83	27655	-62	0	5prime_fragment	FALSE	canonical	3	125	junction_14	44.97112789057	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTATAGAGGTAACTATAT	56918525	False	NA	NA	False	CATAAA	-10	NA	56918560	57262198	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_56918907_56919891_56919989_56921025_56921099_57063749_57063824_57091788_57091892_57166401_57166467_57192157_57192294_57197772_57197826_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57252420_57252493_57253261_57253469_57262093
transcript_64680.nic	chr15	+	2052	17	ISM	ENSG00000140262.18	ENST00000267811.9	6061	20	-125	26629	-123	0	5prime_fragment	FALSE	canonical	3	122	junction_14	37.3003016073597	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGAATCCTCCCAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	56918499	57263224	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_56918907_56919891_56919989_56921025_56921099_57063749_57063824_57091788_57091892_57166401_57166467_57192157_57192294_57197772_57197826_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57253261_57253469_57262093_57262209_57263111
transcript_64683.nic	chr15	+	1857	16	ISM	ENSG00000140262.18	ENST00000267811.9	6061	20	-53	27655	-51	0	5prime_fragment	FALSE	canonical	3	122	junction_14	37.9066690116074	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTATAGAGGTAACTATAT	56918389	True	NA	NA	False	CATAAA	-10	NA	56918571	57262198	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_56918907_56919891_56919989_56921025_56921099_57063749_57063824_57091788_57091892_57166401_57166467_57192157_57192294_57197772_57197826_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57253261_57253469_57262093
transcript_64691.known	chr15	+	1809	14	FSM	ENSG00000140262.18	ENST00000543579.5	1809	14	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	79.9995562117868	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAGAAAAAACAAAACACT	57218652	True	NA	NA	False	NA	NA	NA	57219429	57286251	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_57219591_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57252420_57252493_57253261_57253469_57262093_57262209_57263111_57263275_57273029_57273263_57282444_57282599_57286156
transcript_64693.known	chr15	+	3956	13	FSM	ENSG00000140262.18	ENST00000343827.7	3956	13	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	78.0612295288484	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACACAGTAAAATAGTGAGT	57218688	True	NA	9	True	AATAAA	-18	NA	57219465	57288506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_57219591_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57253261_57253469_57262093_57262209_57263111_57263275_57273029_57273263_57282444_57282599_57286156
transcript_64700.known	chr15	+	2530	3	FSM	ENSG00000247982.7	ENST00000501726.2	2538	3	0	8	0	3	multi-exon	FALSE	canonical	0	0	junction_1	18.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGAACTGTGGCTTGTG	NA	False	NA	NA	False	AATAAA	-30	NA	57300364	57307761	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_57300925_57305318_57307069_57307541
transcript_64701.known	chr15	+	1470	1	FSM	ENSG00000247982.7	ENST00000613170.1	1470	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGCTTGTGTTTCATGT	NA	False	NA	NA	False	AATAAA	-38	NA	57306299	57307769	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_57306300_57307800
transcript_64703.known	chr15	+	7214	19	FSM	ENSG00000128849.11	ENST00000281282.6	7214	19	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	25.2994412664601	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTCTCCTGTGATTG	57372881	True	NA	9	True	AATAAA	-20	NA	57376504	57550717	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_57376568_57437984_57439602_57440376_57440472_57442372_57442479_57451499_57451602_57452140_57452290_57453682_57453819_57461679_57461893_57516779_57516987_57518392_57518498_57523488_57523642_57524580_57524752_57528653_57528816_57531689_57531780_57543695_57543780_57544472_57544598_57545591_57545701_57546075_57546240_57547354
transcript_64719.nnic	chr15	+	2850	11	NIC	ENSG00000128849.11	novel	7214	19	NA	NA	-54	-32271	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	45.9174258860403	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTGTGTCAGCCAGAAG	57372827	True	NA	24	True	AAGAAA	-3	NA	57376450	57518446	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_57376568_57402660_57402715_57437984_57439602_57440376_57440472_57442372_57442479_57451499_57451602_57452140_57452290_57453682_57453819_57461679_57461893_57516779_57516987_57518392
transcript_64726.nic	chr15	+	2811	10	ISM	ENSG00000128849.11	ENST00000281282.6	7214	19	-69	32271	-69	-32271	5prime_fragment	FALSE	canonical	3	52	junction_1	27.149790259063	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTGTGTCAGCCAGAAG	57372812	True	NA	24	True	AAGAAA	-3	NA	57376435	57518446	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_57376568_57437984_57439602_57440376_57440472_57442372_57442479_57451499_57451602_57452140_57452290_57453682_57453819_57461679_57461893_57516779_57516987_57518392
transcript_64729.nnic	chr15	+	2817	10	NNC	ENSG00000128849.11	novel	577	3	NA	NA	9021	-32271	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.1710215874408	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTGTGTCAGCCAGAAG	57382543	False	NA	24	True	AAGAAA	-3	NA	57386166	57518446	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_+_57386305_57437984_57439602_57440376_57440472_57442372_57442479_57451499_57451602_57452140_57452290_57453682_57453819_57461679_57461893_57516779_57516987_57518392
transcript_64732.nic	chr15	+	2689	9	ISM	ENSG00000128849.11	ENST00000281282.6	7214	19	-23	33753	-23	-33753	5prime_fragment	FALSE	canonical	3	52	junction_1	24.806438176409	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAACGCTGAAGAAGTACG	57372858	True	NA	NA	False	NA	NA	NA	57376481	57516964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_57376568_57437984_57439602_57440376_57440472_57442372_57442479_57451499_57451602_57452140_57452290_57453682_57453819_57461679_57461893_57516779
transcript_64752.nic	chr15	+	2060	5	ISM	ENSG00000128849.11	ENST00000281282.6	7214	19	-77	99116	-77	13584	5prime_fragment	FALSE	canonical	3	52	junction_1	31.6385840391128	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATCTGGTTTTTCCTTTAT	57376413	False	NA	5	True	NA	NA	NA	57376427	57451601	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_57376568_57437984_57439602_57440376_57440472_57442372_57442479_57451499
transcript_64756.nnic	chr15	+	2058	5	NNC	ENSG00000128849.11	novel	577	3	NA	NA	9021	13584	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	53.7215040742532	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATCTGGTTTTTCCTTTAT	57382543	False	NA	5	True	NA	NA	NA	57386166	57451601	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_+_57386305_57437984_57439602_57440376_57440472_57442372_57442479_57451499
transcript_64759.nnic	chr15	+	583	4	NNC	ENSG00000128849.11	novel	915	8	NA	NA	9039	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.1993265821489	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCCTCATCTGTTTTGTT	57385077	True	NA	22	True	AGTAAA	-16	NA	57386184	57407282	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_+_57386305_57402660_57402715_57405965_57406065_57406972
transcript_64764.known	chr15	+	2398	13	FSM	ENSG00000263155.6	ENST00000267853.10	2398	13	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_4	2.69258240356725	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTCTCTCTGTTTCATC	57591783	True	NA	7	True	AATAAA	-24	NA	57591903	57685364	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_57592110_57604268_57604356_57618032_57618189_57621607_57621701_57625778_57625893_57629701_57629855_57632433_57632560_57633612_57633742_57637694_57637775_57639439_57639546_57661449_57661534_57674967_57675069_57684401
transcript_64770.known	chr15	+	4114	4	FSM	ENSG00000255529.9	ENST00000299638.8	4114	4	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_1	28.2960539062723	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGTGTTTGGTGTCTTTC	57701716	True	NA	NA	False	TATAAA	-18	NA	57706713	57717557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_57706956_57708713_57709359_57711983_57712189_57714535
transcript_64774.known	chr15	+	1648	4	FSM	ENSG00000255529.9	ENST00000494490.2	1648	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	129.167419352646	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACATGGTATTAAAATTTT	57701697	True	NA	-15	True	NA	NA	NA	57706694	57714882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_57707146_57708713_57709359_57711983_57712189_57714535
transcript_64780.known	chr15	-	11158	16	FSM	ENSG00000137845.15	ENST00000260408.8	11158	16	0	0	0	0	multi-exon	FALSE	canonical	3	586	junction_9	66.4514526218619	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTGTTTGTGGATGAA	-58739818	True	NA	-1	True	AATAAA	-14	NA	58749707	58588808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_58597642_58599597_58599725_58610296_58610518_58610998_58611108_58611807_58611992_58621470_58621622_58627699_58627884_58633195_58633360_58640776_58640961_58643885_58643979_58646054_58646205_58665096_58665198_58679123_58679283_58682195_58682315_58717576_58717728_58749479
transcript_64786.nnic	chr15	-	4572	15	NIC	ENSG00000137845.15	novel	11158	16	NA	NA	-8	1478	combination_of_known_splicesites	FALSE	canonical	3	41	junction_9	183.552806170489	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAAGGTTCTATACTCTT	-58739910	True	NA	-12	True	AATAAA	-17	NA	58749799	58595393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_58597642_58599597_58599725_58610296_58610518_58610998_58611108_58611807_58611992_58621470_58621622_58627699_58627884_58633195_58633360_58640776_58640961_58646054_58646205_58665096_58665198_58679123_58679283_58682195_58682315_58717576_58717728_58749479
transcript_64797.known	chr15	-	861	4	FSM	ENSG00000137845.15	ENST00000402627.5	861	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	378.351688247852	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACGATGGAGTTGGTTTTG	-58749565	False	NA	-9	True	AATGAA	-19	NA	58749594	58596871	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_58597519_58633314_58633360_58640776_58640831_58749479
transcript_64798.known	chr15	-	583	2	FSM	ENSG00000137845.15	ENST00000561288.1	583	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAGGCTAGGAGGCTCGA	-58739818	True	NA	1	True	AATAAA	-44	NA	58749707	58597163	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_58597519_58749479
transcript_64801.known	chr15	-	995	6	FSM	ENSG00000137845.15	ENST00000558733.5	995	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	276.71313665961	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTCTCAGTTATTTCTT	-58739881	True	NA	NA	False	ATTAAA	-21	NA	58749770	58655242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_58655417_58665096_58665198_58679123_58679283_58682195_58682315_58717576_58717728_58749479
transcript_64804.known	chr15	+	5905	14	FSM	ENSG00000157450.16	ENST00000348370.9	5905	14	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_6	23.9980275323575	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTACTCTGGTGACTTT	58983553	True	NA	98	True	GATAAA	-19	NA	58987662	59097419	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_58988069_59030803_59031703_59052304_59052432_59055681_59055846_59058355_59058551_59066763_59067084_59075953_59076216_59080935_59081285_59084128_59084255_59085658_59085786_59089666_59089760_59091058_59091155_59092536_59092641_59094782
transcript_64805.nic	chr15	+	702	2	ISM	ENSG00000157450.16	ENST00000559209.5	5278	14	-304	65970	-15	-54	5prime_fragment	FALSE	canonical	3	140	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTCGTTGTGAGGAAAAAA	58987635	False	NA	NA	False	AAGAAA	-4	NA	58987647	59031084	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_58988069_59030803
transcript_64809.nnic	chr15	+	2198	10	NNC	ENSG00000128923.11	novel	9250	9	NA	NA	-93	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	29.962115997735	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGTGTTATTTTGTAAC	58771087	False	NA	NA	False	GATAAA	-21	NA	58771098	58854591	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_+_58772236_58787905_58787964_58802312_58802378_58806775_58806830_58810229_58810389_58821716_58821820_58831773_58831917_58847296_58847471_58851770_58851966_58854481
transcript_64812.known	chr15	+	1859	9	FSM	ENSG00000128923.11	ENST00000560289.5	1859	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	31.4632722392316	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGTGTTATTTTGTAAC	58769989	True	NA	NA	False	GATAAA	-21	NA	58771285	58854591	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_58772236_58787905_58787964_58802312_58802378_58810229_58810287_58821716_58821824_58831773_58831917_58847296_58847471_58851770_58851966_58854481
transcript_64815.known	chr15	+	4820	9	FSM	ENSG00000128923.11	ENST00000450403.3	4820	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_8	18.060661671157	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	58770065	False	NA	NA	False	AATAGA	-16	NA	58771361	58857533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_58772236_58787905_58787964_58802312_58802378_58810229_58810389_58821716_58821820_58831773_58831917_58847296_58847471_58851770_58851966_58854484
transcript_64833.known	chr15	-	4168	21	FSM	ENSG00000137776.17	ENST00000380516.7	4168	21	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_15	75.2750954831676	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTATGTGTCTTTGTTTTC	-58924688	True	NA	-28	True	AATAAA	-16	NA	58933679	58879049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_58880108_58883625_58883787_58886974_58887120_58887225_58887541_58888384_58888556_58889429_58889555_58890280_58890462_58892896_58893061_58893278_58893365_58893820_58893988_58894089_58894194_58894432_58894583_58897114_58897234_58898802_58898853_58899468_58899938_58901259_58901288_58912562_58912611_58913498_58913697_58916934_58917000_58932355_58932444_58933403
transcript_64842.nic	chr15	-	1654	12	ISM	ENSG00000137776.17	ENST00000380516.7	4168	21	3	14876	3	0	5prime_fragment	FALSE	canonical	3	233	junction_6	69.2890698928162	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAAGGATACTAAGAAAATA	-58924685	True	NA	17	True	AAAAAG	-40	NA	58933676	58893925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_58893988_58894089_58894194_58894432_58894583_58897114_58897234_58898802_58898853_58899468_58899938_58901259_58901288_58912562_58912611_58913498_58913697_58916934_58917000_58932355_58932444_58933403
transcript_64849.known	chr15	-	1373	11	FSM	ENSG00000137776.17	ENST00000249736.11	1373	11	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_5	98.8144220243179	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAATGATGAAAAGAGTAG	-58924588	True	NA	NA	False	AAGAAA	-13	NA	58933579	58894157	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_58894194_58894432_58894583_58897114_58897234_58898802_58898853_58899468_58899884_58901259_58901288_58912562_58912611_58913498_58913697_58916934_58917000_58932355_58932444_58933403
transcript_64851.nic	chr15	-	1633	11	ISM	ENSG00000137776.17	ENST00000380516.7	4168	21	-38	15040	-38	0	5prime_fragment	FALSE	canonical	3	233	junction_5	72.383976127317	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGATTTATTTTTATTT	-58924726	True	NA	NA	False	GATAAA	-27	NA	58933717	58894089	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_58894194_58894432_58894583_58897114_58897234_58898802_58898853_58899468_58899938_58901259_58901288_58912562_58912611_58913498_58913697_58916934_58917000_58932355_58932444_58933403
transcript_64861.known	chr15	-	896	10	FSM	ENSG00000137776.17	ENST00000558756.5	896	10	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_4	123.782166289648	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGATTTATTTTTATTT	-58933394	False	NA	NA	False	GATAAA	-27	NA	58933449	58894089	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_58894194_58894432_58894583_58897114_58897234_58898802_58898853_58901259_58901288_58912562_58912611_58913498_58913697_58916934_58917000_58932355_58932444_58933403
transcript_64869.nic	chr15	-	673	5	ISM	ENSG00000137776.17	ENST00000557950.5	924	7	-118	12145	3	937	5prime_fragment	FALSE	canonical	3	407	junction_2	41.4909628714495	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTTACATTTAGTCCTA	-58924685	True	NA	NA	False	NA	NA	NA	58933676	58912561	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_58912611_58913498_58913697_58916934_58917000_58932355_58932444_58933403
transcript_64871.nic	chr15	-	665	4	ISM	ENSG00000137776.17	ENST00000557950.5	924	7	-159	13082	-38	0	5prime_fragment	FALSE	canonical	3	407	junction_1	42.8978113919839	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTAGCCAGTTTTTTTT	-58924726	True	NA	24	True	AATAGA	-32	NA	58933717	58913498	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_58913697_58916934_58917000_58932355_58932444_58933403
transcript_64872.nic	chr15	-	951	4	ISM	ENSG00000137776.17	ENST00000557950.5	924	7	-563	13200	-442	-60	5prime_fragment	FALSE	canonical	3	407	junction_1	42.8978113919839	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGAAGAAAATGTGCATT	-58934066	True	NA	-94	True	ACTAAA	-25	NA	58934121	58913616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_58913697_58916934_58917000_58932355_58932444_58933403
transcript_64879.known	chr15	-	8644	28	FSM	ENSG00000157483.9	ENST00000288235.9	8644	28	0	0	0	0	multi-exon	TRUE	canonical	3	130	junction_12	30.6448303004383	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATGTCTTTGGAATATG	-59370805	True	NA	NA	False	AGTAAA	-20	NA	59372871	59132433	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_59137457_59138197_59138368_59153589_59153792_59158286_59158380_59161072_59161231_59163156_59163304_59171896_59172043_59173745_59173916_59174125_59174241_59178392_59178538_59188117_59188217_59195460_59195568_59202325_59202408_59205399_59205486_59208680_59208849_59210513_59210601_59214227_59214315_59214639_59214721_59217890_59218088_59223058_59223192_59224688_59224824_59227458_59227591_59231701_59231792_59236584_59236673_59256283_59256379_59261419_59261510_59272305_59272450_59372497
transcript_64884.nic	chr15	-	2556	20	ISM	ENSG00000157483.9	ENST00000288235.9	8644	28	-43	41714	-43	-2251	5prime_fragment	FALSE	canonical	3	130	junction_4	30.6859708802616	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACGTTCAAATGAGAGAAGA	-59370848	True	NA	NA	False	AAGAAA	-1	NA	59372914	59174147	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_59174241_59178392_59178538_59188117_59188217_59195460_59195568_59202325_59202408_59205399_59205486_59208680_59208849_59210513_59210601_59214227_59214315_59214639_59214721_59217890_59218088_59223058_59223192_59224688_59224824_59227458_59227591_59231701_59231792_59236584_59236673_59256283_59256379_59261419_59261510_59272305_59272450_59372497
transcript_64889.nic	chr15	-	626	3	ISM	ENSG00000157483.9	ENST00000558571.1	557	6	-387	33962	-43	10801	5prime_fragment	FALSE	canonical	3	209	junction_1	14	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAATTGAAATGTACCAAG	-59370848	True	NA	NA	False	NA	NA	NA	59372914	59261444	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_59261510_59272305_59272450_59372497
transcript_64892.known	chr15	+	1488	9	FSM	ENSG00000157456.8	ENST00000288207.7	1488	9	0	0	0	0	multi-exon	FALSE	canonical	3	717	junction_5	42.4497865130085	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCATGTGTATTTATTTGT	59091902	True	NA	17	True	AATAAA	-23	NA	59105145	59125045	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_59105293_59107321_59107451_59107556_59107671_59114443_59114615_59114717_59114877_59116689_59116927_59117227_59117369_59123516_59123628_59124766
transcript_64893.known	chr15	+	2503	8	FSM	ENSG00000157456.8	ENST00000621385.1	2503	8	0	0	0	0	multi-exon	FALSE	canonical	3	717	junction_5	41.8173872635656	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCATGTGTATTTATTTG	59092025	False	NA	16	True	AATAAA	-22	NA	59105268	59125044	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_59105293_59107321_59107451_59107556_59107671_59114443_59114615_59114717_59114877_59116689_59116927_59117227_59117369_59123516
transcript_64899.known	chr15	+	3458	9	FSM	ENSG00000157470.12	ENST00000288228.10	3458	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	2.02715934252836	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGTGTATGATTTTTAAA	59438054	True	NA	NA	False	AATAAA	-26	NA	59438185	59523555	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_59438283_59458549_59458647_59459932_59460207_59492270_59492390_59507212_59507343_59508862_59508970_59514288_59514425_59516644_59516841_59521253
transcript_64901.known	chr15	+	887	3	FSM	ENSG00000157470.12	ENST00000558513.1	887	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGCATTTGGATTGCTC	59438069	True	NA	NA	False	AATACA	-18	NA	59438200	59460640	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_59438283_59458549_59458647_59459932
transcript_64905.known	chr15	-	2515	10	FSM	ENSG00000140299.13	ENST00000612191.4	2515	10	0	0	0	0	multi-exon	TRUE	canonical	3	199	junction_1	28.5298197905972	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAAAAGTTTAATTACC	NA	False	NA	NA	False	AATAAA	-17	NA	59689443	59662864	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_59664121_59668891_59668991_59669275_59669363_59671182_59671315_59672636_59672740_59677910_59678088_59679591_59679769_59680240_59680309_59682407_59682515_59689134
transcript_64906.known	chr15	-	970	6	FSM	ENSG00000140307.11	ENST00000396063.5	970	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	587.497268078755	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTAATAACTGGTGAAGC	-59645128	True	NA	-20	True	AATAAA	-16	NA	59657514	59638868	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_59639158_59642135_59642263_59650668_59650774_59652205_59652327_59656814_59657034_59657405
transcript_64908.known	chr15	-	1559	5	FSM	ENSG00000140307.11	ENST00000396060.7	1559	5	0	0	0	0	multi-exon	FALSE	canonical	3	1123	junction_2	69.3194597497701	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTCTATGCATGTATTT	-59645129	True	NA	-3	True	AATAAA	-18	NA	59657515	59638061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_59639158_59642135_59642263_59650668_59650774_59652205_59652327_59657405
transcript_64910.known	chr15	-	832	5	FSM	ENSG00000140299.13	ENST00000560458.5	832	5	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_2	15.1389398572027	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAACACAGGCGCTAGGT	-59684175	True	NA	NA	False	AGTAAA	-11	NA	59689339	59677812	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_59678088_59679591_59679769_59680240_59680309_59682407_59682515_59689134
transcript_64913.known	chr15	-	518	3	FSM	ENSG00000140307.11	ENST00000267869.8	518	3	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_2	554.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTGAAGCTATTAAGGTA	-59645111	True	NA	-10	True	AATAAA	-26	NA	59657497	59638858	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_59639158_59642135_59642263_59657405
transcript_64914.known	chr15	-	633	4	FSM	ENSG00000140307.11	ENST00000396064.7	633	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	600.816296568446	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATAACTGGTGAAGCTAT	-59645134	True	NA	-17	True	AATAAA	-19	NA	59657520	59638865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_59639158_59650668_59650774_59652205_59652327_59657405
transcript_64915.known	chr15	+	795	1	FSM	ENSG00000234797.5	ENST00000484430.1	795	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	892	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCAGACTTCAAATAGTG	NA	False	NA	NA	False	NA	NA	NA	59768351	59769146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_59768400_59769100
transcript_64916.known	chr15	+	2871	2	FSM	ENSG00000171956.7	ENST00000396057.6	2871	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTAGTTTTGTGTGTTTTT	60001749	True	NA	19	True	ATTAAA	-16	NA	60004310	60007444	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_60004644_60004906
transcript_64918.known	chr15	-	757	3	FSM	ENSG00000259223.2	ENST00000560503.2	757	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGATCTGTGCTATTTTG	-60118281	True	NA	NA	False	AATAAA	-19	NA	60118320	60073553	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_60074049_60074800_60074936_60118193
transcript_64919.known	chr15	-	1920	15	FSM	ENSG00000182718.18	ENST00000558169.6	1920	15	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_6	692.11629021695	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	-60387404	True	NA	NA	False	AATAAA	-22	NA	60397988	60347143	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354209_60355914_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60396150_60396428_60397257_60397339_60397942
transcript_64920.known	chr15	-	1790	15	FSM	ENSG00000182718.18	ENST00000557906.6	1790	15	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_12	626.999564658248	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	-60387402	True	NA	NA	False	AATAAA	-22	NA	60397986	60347143	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60396279_60396428_60397257_60397339_60397942
transcript_64921.known	chr15	-	1838	14	FSM	ENSG00000182718.18	ENST00000560468.6	1838	14	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_13	572.504835771933	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	-60387402	True	NA	NA	False	AATAAA	-22	NA	60397986	60347143	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60396150_60396428_60397942
transcript_64922.known	chr15	-	1616	14	FSM	ENSG00000182718.18	ENST00000558558.6	1616	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	574.645380743174	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	-60387402	True	NA	NA	False	AATAAA	-22	NA	60397986	60347143	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60396372_60396428_60397942
transcript_64923.known	chr15	-	1444	14	FSM	ENSG00000182718.18	ENST00000421017.6	1444	14	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_13	509.824485403712	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTAGAAACACGTACTTT	-60387402	True	NA	-17	True	AATAAA	-11	NA	60397986	60347341	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60397257_60397339_60397942
transcript_64924.known	chr15	-	1444	13	FSM	ENSG00000182718.18	ENST00000332680.8	1444	13	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_12	440.248690767187	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTACTTTGTGGCCCTGC	-60387401	True	NA	-7	True	AATAAA	-21	NA	60397985	60347331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60397870
transcript_64925.known	chr15	-	1554	13	FSM	ENSG00000182718.18	ENST00000451270.7	1554	13	0	0	0	0	multi-exon	FALSE	canonical	3	1313	junction_12	114.214314874372	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCCTGAGTCACACAATCC	-60387402	True	NA	NA	False	AATAAA	-15	NA	60397986	60347150	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60397942
transcript_64926.known	chr15	-	1542	13	FSM	ENSG00000182718.18	ENST00000559113.6	1542	13	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_10	626.456746755557	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	-60387402	True	NA	NA	False	AATAAA	-22	NA	60397986	60347143	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60386027_60386087_60397257_60397339_60397942
transcript_64927.known	chr15	-	1445	12	FSM	ENSG00000182718.18	ENST00000558985.6	1445	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_10	450.749733570692	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCAAGTGTCGCTATTTA	-60387449	True	NA	NA	False	AAGAAA	-35	NA	60398033	60347206	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60386027_60386087_60397942
transcript_64930.known	chr15	-	908	3	FSM	ENSG00000182718.18	ENST00000560936.2	908	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	72.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTCGCAGTCATGGCCGT	-60387402	True	NA	NA	False	ATTAAA	-21	NA	60397986	60395644	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_60396428_60397257_60397339_60397942
transcript_64931.known	chr15	-	1659	13	FSM	ENSG00000182718.18	ENST00000676687.1	1659	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	446.207413156209	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	-60387493	True	NA	NA	False	AATAAA	-22	NA	60398077	60347143	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357138_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60397942
transcript_64939.known	chr15	-	7060	16	FSM	ENSG00000128915.12	ENST00000558181.5	7060	16	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_13	63.2304427383589	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCTACTGTTGCCATGT	-60473250	True	NA	-7	True	AATAAA	-19	NA	60479160	60419612	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_60423763_60428428_60428688_60431933_60431985_60436142_60436228_60442415_60442546_60447969_60448146_60448847_60449842_60453602_60453785_60455002_60455163_60455325_60455443_60456656_60456795_60466593_60466714_60468060_60468163_60476062_60476168_60477936_60478070_60479002
transcript_6494.known	chr1	+	3583	7	FSM	ENSG00000116497.18	ENST00000356689.7	3583	7	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_6	117.999646892127	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTTGAAGACATTCAGT	32812585	True	NA	NA	False	AAAACA	-34	NA	32817591	32837178	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32817690_32825312_32825430_32826097_32826931_32827992_32828082_32829963_32830068_32834033_32834062_32834864
transcript_64940.known	chr15	-	7206	16	FSM	ENSG00000128915.12	ENST00000261520.9	7206	16	0	0	0	0	multi-exon	TRUE	canonical	3	251	junction_13	43.6874759577108	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACTGTTGCCATGTCCCC	-60473232	True	NA	-3	True	AATAAA	-23	NA	60479142	60419608	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_60423763_60428428_60428688_60431933_60431985_60436142_60436228_60442415_60442546_60447969_60448146_60448847_60449842_60453602_60453785_60455002_60455163_60455325_60455443_60456656_60456795_60466593_60466714_60468060_60468323_60476062_60476168_60477936_60478070_60479002
transcript_6495.known	chr1	+	4220	7	FSM	ENSG00000116497.18	ENST00000373475.10	4220	7	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	46.2409150236262	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATGTACTGTGGCGGTCT	32812646	True	NA	20	True	AATAAA	-17	NA	32817652	32858875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32817690_32825312_32825430_32826097_32826931_32827992_32828082_32829963_32830068_32853078_32853167_32855923
transcript_64969.known	chr15	-	3796	9	FSM	ENSG00000128915.12	ENST00000561114.5	3796	9	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_6	56.9614727249919	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTATCATGGATTTTC	-60473163	True	NA	NA	False	AATAAA	-16	NA	60479073	60451094	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_60453785_60455002_60455163_60455325_60455443_60456656_60456795_60466593_60466714_60468060_60468323_60476062_60476168_60477936_60478070_60479002
transcript_64972.known	chr15	-	584	5	FSM	ENSG00000128915.12	ENST00000560406.5	584	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	171.840041899436	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCACAGAGAGAGCAGAGG	-60473193	True	NA	NA	False	NA	NA	NA	60479103	60468170	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_60468323_60476062_60476168_60477936_60478070_60478567_60478661_60479002
transcript_64973.nic	chr15	-	645	4	ISM	ENSG00000128915.12	ENST00000561114.5	3796	9	-80	16972	7	104	5prime_fragment	FALSE	canonical	3	251	junction_1	72.3064466159292	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGTATGTATTGTGTT	-60473243	True	NA	-2	True	AATAAA	-20	NA	60479153	60468066	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_60468323_60476062_60476168_60477936_60478070_60479002
transcript_64975.known	chr15	-	559	5	FSM	ENSG00000128915.12	ENST00000560072.5	559	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	161.253682128502	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACTGAGTTCCTAAAGTT	-60473193	True	NA	NA	False	TTTAAA	-34	NA	60479103	60466686	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_60466714_60468060_60468323_60476062_60476168_60477936_60478070_60479071
transcript_64976.known	chr15	-	10827	11	FSM	ENSG00000069667.16	ENST00000335670.11	10827	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	4.61410879802373	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTTGCCTTGTTTTTCTTC	NA	False	NA	NA	False	AATAAA	-20	NA	61229302	60488283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_60497620_60499891_60500005_60500958_60501070_60502759_60502868_60503534_60503668_60505507_60505630_60511225_60511622_60514615_60514758_60531765_60531852_60678656_60678687_61229052
transcript_64977.known	chr15	-	1701	10	FSM	ENSG00000069667.16	ENST00000449337.6	1701	10	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	1.24721912892465	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGAACTTGTTTTTCTC	-60592079	True	NA	-24	True	AATGAA	-10	NA	60592541	60497284	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_60497620_60499891_60500005_60500958_60501070_60502759_60502868_60503534_60503668_60505507_60505630_60511225_60511622_60514615_60514758_60531765_60531852_60592386
transcript_64981.known	chr15	-	492	2	FSM	ENSG00000069667.16	ENST00000558904.2	492	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAATGTGTGTGTGTGTGT	-61228446	False	NA	NA	False	AATAAA	-28	NA	61229155	61176067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_61176457_61229052
transcript_65.known	ERCC-00171	+	489	1	FSM	ERCC-00171A	DQ854994	489	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3191	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	489	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00171_+_0_500
transcript_65012.nic	chr15	+	1414	10	NIC	ENSG00000140416.23	novel	1295	10	NA	NA	-169	0	combination_of_known_junctions	FALSE	canonical	3	301	junction_9	468.529404060338	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTGTTTGCTATTCTT	63042378	False	NA	18	True	AATAAA	-13	NA	63042462	63066091	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63064063_63064143_63065895
transcript_65013.known	chr15	+	1295	10	FSM	ENSG00000140416.23	ENST00000288398.10	1295	10	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_9	527.138630535146	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTGCTATTCTTTT	63006892	True	NA	20	True	AATAAA	-15	NA	63042631	63066093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63064063_63064191_63065895
transcript_65014.known	chr15	+	1217	10	FSM	ENSG00000140416.23	ENST00000403994.9	1217	10	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_9	537.249327134221	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGTTAGTGTTTGGCTG	63007007	True	NA	8	True	AATAAA	-24	NA	63042746	63066178	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63064063_63064143_63065895
transcript_65015.known	chr15	+	1097	10	FSM	ENSG00000140416.23	ENST00000560970.6	1097	10	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_9	579.093437949821	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTGCTATTCTTTT	63042699	False	NA	20	True	AATAAA	-15	NA	63042829	63066093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63064063_63064191_63065895
transcript_65019.known	chr15	+	1100	10	FSM	ENSG00000140416.23	ENST00000561266.6	1100	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	633.889755574439	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTGTTTGCTATTCTT	63007037	False	NA	18	True	AATAAA	-13	NA	63042776	63066091	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_63042944_63043705_63043832_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63064063_63064143_63065895
transcript_65034.nic	chr15	+	1163	9	NIC	ENSG00000140416.23	novel	1295	10	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	112	junction_8	457.204822809209	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGTTTGCTATTCTTT	63006896	True	NA	19	True	AATAAA	-14	NA	63042635	63066092	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63065895
transcript_65035.known	chr15	+	1717	9	FSM	ENSG00000140416.23	ENST00000358278.7	1717	9	0	0	0	0	multi-exon	FALSE	canonical	3	1160	junction_2	187.662429644295	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCACATTGTAGGACATTT	63006945	True	NA	-5	True	AATAAA	-1	NA	63042684	63071889	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63071089
transcript_65042.known	chr15	+	977	9	FSM	ENSG00000140416.23	ENST00000559556.5	977	9	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_5	447.724454882688	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACACCTGCTTACCCCTT	63007018	True	NA	NA	False	NA	NA	NA	63042757	63071222	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63071089
transcript_65045.known	chr15	+	933	9	FSM	ENSG00000140416.23	ENST00000559397.6	933	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	618.558354159088	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACATTCTTTCGTTTTGTT	63007030	False	NA	NA	False	NA	NA	NA	63042769	63071190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_63042944_63043705_63043832_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63071089
transcript_65049.known	chr15	+	1670	9	FSM	ENSG00000140416.23	ENST00000267996.11	1670	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	652.228439658989	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGGTCCTGTCATTTG	63007018	True	NA	21	True	AATAAA	-27	NA	63042757	63071915	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_63042944_63043705_63043832_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63071089
transcript_65057.known	chr15	+	941	9	FSM	ENSG00000140416.23	ENST00000559281.6	941	9	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_8	576.205692439774	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTGCTATTCTTTT	63048286	False	NA	20	True	AATAAA	-15	NA	63048575	63066093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_63048708_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63064063_63064143_63065895
transcript_65077.known	chr15	+	943	8	FSM	ENSG00000140416.23	ENST00000404484.9	943	8	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_1	377.917980519583	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCACTGTCACAGAAACATC	63045018	True	NA	NA	False	TTTAAA	-38	NA	63048470	63071263	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_63048708_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63071089
transcript_65078.known	chr15	+	1968	8	FSM	ENSG00000140416.23	ENST00000558910.3	1968	8	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_7	576.204328837808	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGAATGTTTCAGAGTTC	63045034	True	NA	10	True	ATTAAA	-26	NA	63048486	63065278	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_63048708_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63064063
transcript_65096.nic	chr15	+	677	4	ISM	ENSG00000140416.23	ENST00000288398.10	1295	10	-77	6503	-77	0	5prime_fragment	FALSE	canonical	3	1160	junction_2	176.426251510999	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAAGATGAAGAAAAAAT	63042543	False	NA	NA	False	NA	NA	NA	63042554	63059590	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562
transcript_65099.known	chr15	+	653	4	FSM	ENSG00000140416.23	ENST00000558868.5	653	4	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_1	494.517497724353	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGGGTGTCTTATGTAT	63045084	False	NA	NA	False	NA	NA	NA	63048536	63061098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_63048708_63056984_63057119_63059562_63059681_63060868
transcript_65101.nic	chr15	+	541	3	ISM	ENSG00000140416.23	ENST00000558868.5	653	4	-208	1508	-110	0	5prime_fragment	FALSE	canonical	3	450	junction_1	546	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAAGATGAAGAAAAAAT	63048315	False	NA	NA	False	NA	NA	NA	63048328	63059590	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_63048708_63056984_63057119_63059562
transcript_65102.known	chr15	+	3957	2	FSM	ENSG00000140416.23	ENST00000610733.1	3957	2	0	0	0	0	multi-exon	FALSE	canonical	3	1176	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTAGCTATCATTTGAGTT	63006947	True	NA	34	True	AAAACA	-20	NA	63042686	63047726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_63042944_63044026
transcript_65107.known	chr15	+	1911	6	FSM	ENSG00000103642.12	ENST00000261893.9	1911	6	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_5	15.4350251052598	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACTTTCTGCATGTGTAA	63120363	True	NA	9	True	AATAAA	-17	NA	63121860	63142061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_63122229_63122635_63122703_63126858_63127050_63127352_63127690_63129484_63129651_63141279
transcript_65109.known	chr15	+	2978	5	FSM	ENSG00000103642.12	ENST00000413507.3	2978	5	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_4	14.5494845269515	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTATTTTTTGTTTTG	63120335	True	NA	26	True	AATAAA	-37	NA	63121832	63131471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_63122229_63122635_63122703_63126858_63127050_63127352_63127690_63129484
transcript_65112.known	chr15	-	923	4	FSM	ENSG00000185088.14	ENST00000455271.5	923	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2135.16947024508	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTCTTTTTCTTTTTTT	-63157271	False	NA	-7	True	AATAAA	-19	NA	63157281	63153852	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_63154061_63155620_63155732_63156412_63156522_63156786
transcript_65114.known	chr15	-	6110	4	FSM	ENSG00000185088.14	ENST00000330964.10	6110	4	0	0	0	0	multi-exon	FALSE	canonical	3	4359	junction_3	90.292118519097	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTATTGGATTGGTAAAT	-63125910	True	NA	NA	False	AATAAA	-22	NA	63157477	63148248	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_63154061_63155620_63155732_63156412_63156522_63157399
transcript_65115.known	chr15	-	970	3	FSM	ENSG00000185088.14	ENST00000439025.1	970	3	0	0	0	0	multi-exon	FALSE	canonical	3	4359	junction_2	59	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCTTTTACAAAATTTT	-63125932	True	NA	NA	False	TTTAAA	-18	NA	63157499	63154970	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_63155732_63156412_63156522_63157399
transcript_65118.known	chr15	+	774	9	FSM	ENSG00000166128.13	ENST00000558119.5	774	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	93.7456665665139	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGTCACCCAGCCTCAGA	63184306	True	NA	NA	False	NA	NA	NA	63189593	63263679	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_63189749_63244755_63244817_63249644_63249706_63251283_63251343_63255506_63255585_63256504_63256595_63259626_63259693_63262691_63262743_63263526
transcript_65119.known	chr15	+	4800	8	FSM	ENSG00000166128.13	ENST00000321437.9	4800	8	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_5	25.5885816372085	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTAATGGCTCTCTGAAAT	63184318	True	NA	66	True	AATAAA	-23	NA	63189605	63267776	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_63189749_63244755_63244817_63249644_63249706_63255506_63255585_63256504_63256595_63259626_63259693_63262691_63262743_63263526
transcript_6512.known	chr1	+	706	3	FSM	ENSG00000116497.18	ENST00000482212.1	706	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	112.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTGCACCATTTAATCCA	32812692	True	NA	NA	False	ATTAAA	-39	NA	32817698	32826538	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_32817847_32825312_32825430_32826097
transcript_65123.known	chr15	+	584	7	FSM	ENSG00000166128.13	ENST00000559006.1	584	7	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_5	25.4798395250485	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGTTTGGCATTTGAT	63184318	True	NA	57	True	NA	NA	NA	63189605	63262776	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_63189749_63244755_63244817_63249644_63249706_63255506_63255585_63256504_63256595_63259626_63259693_63262691
transcript_65124.known	chr15	+	4138	6	FSM	ENSG00000138613.14	ENST00000261879.10	4138	6	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_3	15.4350251052598	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGTGTTTCCTGTTCT	63275136	True	NA	10	True	AATAAA	-22	NA	63277604	63309126	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_63277737_63279160_63279332_63286557_63286629_63287423_63287547_63302344_63302473_63305613
transcript_65126.known	chr15	+	685	5	FSM	ENSG00000138613.14	ENST00000380343.8	685	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	44.7325384926901	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAACCGCAGACTACATCT	63275141	True	NA	-88	True	NA	NA	NA	63277609	63305801	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_63277737_63279160_63279332_63286557_63286629_63302344_63302473_63305613
transcript_65130.known	chr15	-	6098	11	FSM	ENSG00000074410.14	ENST00000178638.8	6098	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	3.57211421989835	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCGTATCATGATGACTG	-63381666	True	NA	NA	False	CATAAA	-17	NA	63381846	63321377	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_63326358_63327148_63327234_63328097_63328131_63338818_63338946_63340287_63340446_63340719_63340784_63342001_63342098_63345476_63345620_63346529_63346710_63375657_63375679_63381635
transcript_65131.known	chr15	-	2744	10	FSM	ENSG00000074410.14	ENST00000344366.7	2744	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	3.22413736189931	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTCTGTACCATCACAAC	-63381655	True	NA	NA	False	NA	NA	NA	63381835	63324687	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_63326358_63327148_63327234_63338818_63338946_63340287_63340446_63340719_63340784_63342001_63342098_63345476_63345620_63346529_63346710_63375657_63375679_63381635
transcript_65133.known	chr15	-	2556	9	FSM	ENSG00000074410.14	ENST00000422263.2	2556	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	4.52078533000628	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAT	-63381666	True	NA	NA	False	NA	NA	NA	63381846	63324706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_63326358_63327148_63327234_63338818_63338946_63340287_63340446_63340719_63340784_63342001_63342098_63345476_63345620_63375657_63375679_63381635
transcript_65135.known	chr15	+	5499	16	FSM	ENSG00000140455.17	ENST00000559192.5	5499	16	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	47.9054624581929	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTTCTGAACACCTTTT	63504713	False	NA	19	True	ATTAAA	-23	NA	63504733	63594640	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_63504831_63532646_63532708_63533802_63533919_63537024_63537157_63553714_63553799_63556666_63556749_63558105_63558189_63559856_63559971_63562894_63563009_63570432_63570580_63574045_63574153_63574322_63574404_63588304_63588424_63588701_63588816_63588943_63589012_63590660
transcript_65136.known	chr15	+	2439	16	FSM	ENSG00000140455.17	ENST00000558157.5	2439	16	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	45.4030835957207	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTGTCCTGCAAATACAA	63502248	True	NA	6	True	AATAAA	-17	NA	63504634	63591444	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_63504831_63529013_63529167_63532646_63532708_63537024_63537157_63553714_63553799_63556666_63556749_63558105_63558189_63559856_63559971_63562894_63563009_63570432_63570580_63574045_63574153_63574322_63574404_63588304_63588424_63588701_63588816_63588943_63589012_63590660
transcript_65137.known	chr15	+	5517	15	FSM	ENSG00000140455.17	ENST00000380324.8	5517	15	0	0	0	0	multi-exon	TRUE	canonical	3	119	junction_1	21.1351337244651	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGACTTATTTCTGAAC	63502206	True	NA	12	True	ATTAAA	-16	NA	63504592	63594633	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_63504831_63532646_63532708_63537024_63537157_63553714_63553799_63556666_63556749_63558105_63558189_63559856_63559971_63562894_63563009_63570432_63570580_63574045_63574153_63574322_63574404_63588304_63588424_63588701_63588816_63588943_63589012_63590660
transcript_65148.known	chr15	-	1741	12	FSM	ENSG00000035664.11	ENST00000457488.5	1741	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	2.90340353139478	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGGCTTCTTTTAGGGC	-64046214	False	NA	NA	False	ATTAAA	-17	NA	64046322	63907922	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_63908601_63911907_63911992_63912107_63912198_63924815_63924862_63925940_63926094_63929550_63929578_63930406_63930456_63939231_63939362_63971422_63971562_63983532_63983755_64040169_64040268_64046297
transcript_6515.known	chr1	-	1030	6	FSM	ENSG00000121900.19	ENST00000373463.8	1030	6	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_5	18.8637217960826	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGGCTGCATGCAGGGG	-32900376	True	NA	-1	True	ATTAAA	-17	NA	32901389	32894594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32894880_32895304_32895440_32895554_32895744_32895909_32895970_32898125_32898320_32901222
transcript_65154.known	chr15	-	919	5	FSM	ENSG00000166797.11	ENST00000300030.8	919	5	0	0	0	0	multi-exon	FALSE	canonical	3	1044	junction_2	98.9504295089213	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGACTCACTGTTTTTAT	-64081493	True	NA	-28	True	AATAAA	-18	NA	64093838	64072564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_64073029_64075491_64075538_64081101_64081152_64088686_64088852_64093644
transcript_65155.known	chr15	-	826	4	FSM	ENSG00000166797.11	ENST00000380290.7	826	4	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_2	472.269932230381	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATGATTCTTATAATGAC	-64081463	True	NA	-41	True	AATAAA	-5	NA	64093808	64072577	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_64073029_64075491_64075538_64088686_64088852_64093644
transcript_6516.nnic	chr1	-	1157	6	NNC	ENSG00000121900.19	novel	1030	6	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	95.300786985208	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGGCTGCATGCAGGGG	-32900449	False	NA	-1	True	ATTAAA	-17	NA	32901462	32894594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_32894934_32895304_32895440_32895554_32895744_32895909_32895970_32898125_32898320_32901222
transcript_65162.known	chr15	+	8214	15	FSM	ENSG00000028528.15	ENST00000559844.6	8214	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	111.250498737703	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCCAGTGCATCCTTTGA	64087399	True	NA	10	True	AATAAA	-22	NA	64095981	64144231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_64096173_64112572_64112685_64118116_64118245_64118787_64118855_64123502_64123547_64126078_64126221_64127173_64127253_64127730_64127807_64129915_64130030_64130227_64130322_64131686_64131893_64134663_64134808_64136329_64136411_64136860_64136933_64137567
transcript_65163.known	chr15	+	3373	15	FSM	ENSG00000028528.15	ENST00000261889.9	3373	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	148.961935283029	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTCCTCAGTTTGGATT	64087410	True	NA	NA	False	AATACA	-14	NA	64095992	64139875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_64096173_64112572_64112685_64118116_64118245_64118787_64118855_64123502_64123547_64126078_64126221_64127173_64127253_64127730_64127807_64129915_64130030_64130227_64130322_64131686_64131893_64134663_64134808_64136329_64136411_64136860_64136933_64138041
transcript_65165.known	chr15	+	8119	15	FSM	ENSG00000028528.15	ENST00000380285.7	8119	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	111.250498737703	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCCAGTGCATCCTTTGA	64087408	True	NA	10	True	AATAAA	-22	NA	64095990	64144231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_64096173_64112572_64112685_64118202_64118245_64118787_64118855_64123502_64123547_64126078_64126221_64127173_64127253_64127730_64127807_64129915_64130030_64130227_64130322_64131686_64131893_64134663_64134808_64136329_64136411_64136860_64136933_64137567
transcript_65168.nic	chr15	+	2622	14	ISM	ENSG00000028528.15	ENST00000261889.9	3373	15	-14	1874	-3	-5	5prime_fragment	FALSE	canonical	0	0	junction_2	115.328191332286	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGTCACATGACTCAGAA	64087396	True	NA	5	True	AATAAA	-12	NA	64095978	64138001	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_64096173_64112572_64112685_64118116_64118245_64118787_64118855_64123502_64123547_64126078_64126221_64127173_64127253_64127730_64127807_64129915_64130030_64130227_64130322_64131686_64131893_64134663_64134808_64136329_64136411_64136860
transcript_6517.known	chr1	-	768	5	FSM	ENSG00000121900.19	ENST00000475208.5	768	5	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_3	97.345711256326	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCTGAGCTGCACCAGC	-32900425	True	NA	NA	False	NA	NA	NA	32901438	32894845	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_32894880_32895304_32895440_32895554_32895744_32898125_32898320_32901222
transcript_65174.known	chr15	+	1374	13	FSM	ENSG00000028528.15	ENST00000561026.5	1374	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	119.561322016036	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACCAAGGACCCCAGAGC	64087431	True	NA	NA	False	NA	NA	NA	64096013	64137618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_64096173_64112572_64112685_64123502_64123547_64126078_64126221_64127173_64127253_64127730_64127807_64129915_64130030_64130227_64130322_64131686_64131893_64134663_64134808_64136329_64136411_64136860_64136933_64137567
transcript_65185.known	chr15	-	888	5	FSM	ENSG00000166794.6	ENST00000680343.1	888	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	2271.51594480426	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAATGGGTGCCTGCCCC	-64162497	False	NA	NA	False	NA	NA	NA	64162581	64155739	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_64156146_64156724_64156910_64160103_64160198_64162040_64162155_64162492
transcript_65186.known	chr15	-	893	5	FSM	ENSG00000166794.6	ENST00000300026.4	893	5	0	0	0	0	multi-exon	FALSE	canonical	3	4932	junction_4	148.211630785172	3221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATGTGTGGGCCTGGTT	-64092537	True	NA	NA	False	AATAAA	-30	NA	64163022	64155816	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_64156146_64156724_64156910_64160103_64160198_64162040_64162155_64162851
transcript_65187.known	chr15	-	869	5	FSM	ENSG00000166794.6	ENST00000681658.1	869	5	0	0	0	0	multi-exon	FALSE	canonical	3	469	junction_4	2071.0942759807	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAATGGGTGCCTGCCCC	-64092541	True	NA	NA	False	NA	NA	NA	64163026	64155739	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_64156146_64156724_64156910_64160103_64160198_64162040_64162155_64162956
transcript_65193.known	chr15	-	2485	13	FSM	ENSG00000169118.18	ENST00000634654.1	2485	13	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	10.5790673817056	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTCTGGTTATATTGG	-64355059	True	NA	2	True	TTTAAA	-32	NA	64356071	64171133	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_64171986_64180347_64180455_64188374_64188486_64203081_64203190_64204440_64204590_64204864_64204950_64207508_64207595_64213889_64214125_64216561_64216714_64251511_64251582_64259200_64259242_64300318_64300724_64355987
transcript_65195.known	chr15	-	8085	12	FSM	ENSG00000169118.18	ENST00000303052.13	8085	12	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	6.59701911146427	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGCTGAAGAAGAAAATTAT	-64355161	True	NA	NA	False	AATAAA	-20	NA	64356173	64165524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_64171986_64180347_64180455_64203081_64203190_64204440_64204590_64204864_64204950_64207508_64207595_64213889_64214125_64216561_64216714_64251511_64251582_64259200_64259242_64300318_64300724_64355987
transcript_65202.known	chr15	-	2132	4	FSM	ENSG00000166803.14	ENST00000300035.9	2132	4	0	0	0	0	multi-exon	FALSE	canonical	3	861	junction_2	80.8125402809902	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTGTGTGCTTCCTAA	-64370775	True	NA	-18	True	AATAAA	-27	NA	64381441	64364303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_64366076_64376742_64376906_64380957_64381039_64381325
transcript_65204.known	chr15	-	911	3	FSM	ENSG00000166803.14	ENST00000380258.6	911	3	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	467	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCAGGAGTTGGAGACCA	-64370778	True	NA	NA	False	NA	NA	NA	64381444	64365364	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_64366076_64380957_64381039_64381325
transcript_65207.known	chr15	+	2013	13	FSM	ENSG00000103671.10	ENST00000261884.8	2013	13	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_11	14.9840192649814	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTTGACATTTTTCTTA	64385150	True	NA	19	True	TATAAA	-21	NA	64387835	64455303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_64387965_64393945_64394116_64395397_64395532_64397605_64397819_64400742_64400822_64406329_64406460_64409612_64409829_64414084_64414212_64418540_64418729_64424030_64424156_64425539_64425632_64445005_64445109_64454996
transcript_65213.nic	chr15	+	1730	10	ISM	ENSG00000103671.10	ENST00000261884.8	2013	13	-44	30973	39	0	5prime_fragment	TRUE	canonical	3	109	junction_2	14.2992704639946	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAAAACAGTGCAAATAAAA	64385106	True	NA	NA	False	NA	NA	NA	64387791	64424330	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_64387965_64393945_64394116_64395397_64395532_64397605_64397819_64400742_64400822_64406329_64406460_64409612_64409829_64414084_64414212_64418540_64418729_64424030
transcript_65214.nic	chr15	+	2320	5	ISM	ENSG00000180357.10	ENST00000326648.5	9006	10	-15	11297	-15	0	5prime_fragment	FALSE	canonical	2	14	junction_2	4.63680924774785	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTCTAGTTTAAAACCTGA	64460551	False	NA	NA	False	AAAAAG	-15	NA	64460562	64674771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_64460839_64499292_64500167_64622826_64623053_64670345_64670434_64673915
transcript_65215.nic	chr15	+	2604	5	ISM	ENSG00000180357.10	ENST00000326648.5	9006	10	-15	11013	-15	284	5prime_fragment	FALSE	canonical	2	14	junction_2	4.63680924774785	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGAATCTTCAAAGGAAC	64460551	False	NA	NA	False	AAAAAG	-15	NA	64460562	64675055	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_64460839_64499292_64500167_64622826_64623053_64670345_64670434_64673915
transcript_65216.known	chr15	+	3863	2	FSM	ENSG00000180357.10	ENST00000416172.1	3863	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	64459816	True	NA	NA	False	AATAGA	-16	NA	64460741	64503058	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_64460839_64499292
transcript_6522.nnic	chr1	-	2682	10	NNC	ENSG00000116514.17	novel	2677	9	NA	NA	-113	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	23.6945584209842	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACCTCATTTTCCTTGGC	-32963921	True	NA	-4	True	AATAAA	-20	NA	32964922	32936448	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_32937260_32938396_32938529_32942251_32942460_32944018_32944160_32945513_32945629_32946401_32946565_32948221_32948364_32949568_32949775_32964050_32964399_32964506
transcript_65222.known	chr15	-	1934	6	FSM	ENSG00000180304.14	ENST00000326005.10	1934	6	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_4	1205.64329716546	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTATTCTTTATTTCT	-64679111	False	NA	-21	True	AATAAA	-18	NA	64703281	64687572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_64688835_64689083_64689170_64690373_64690550_64691433_64691515_64691515_64691592_64703028
transcript_65226.known	chr15	-	785	4	FSM	ENSG00000180304.14	ENST00000559753.1	785	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	1327.74353279874	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGTTTATGAACTGGCA	-64679031	True	NA	-42	True	AGTAAA	-3	NA	64703201	64688484	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_64688835_64689083_64689170_64690373_64690550_64703028
transcript_65228.known	chr15	-	1744	5	FSM	ENSG00000180304.14	ENST00000560258.6	1744	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	1546.73931223073	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTGTCAATAAACTGATT	-64679038	True	NA	-52	True	NA	NA	NA	64703208	64687603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_64688835_64690373_64690550_64691433_64691515_64691515_64691592_64703028
transcript_65242.known	chr15	-	2017	8	FSM	ENSG00000166831.9	ENST00000300069.5	2017	8	0	0	0	0	multi-exon	FALSE	canonical	3	1490	junction_2	180.576853444731	703	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTCTCGGCCTTTGCTTC	-64760463	True	NA	-12	True	AATAAA	-16	NA	64775589	64739890	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_64741001_64741172_64741243_64748418_64748568_64748999_64749151_64749430_64749494_64750342_64750382_64751560_64751639_64775232
transcript_6525.known	chr1	-	880	8	FSM	ENSG00000004455.17	ENST00000467905.5	880	8	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	585.48657594538	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGGAAGGGTGGTCAGGG	-33016816	True	NA	NA	False	NA	NA	NA	33036886	33010754	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_33010834_33012073_33012123_33013206_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33024441_33024568_33036735
transcript_65268.known	chr15	-	2278	13	FSM	ENSG00000140451.13	ENST00000333425.10	2278	13	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	112.007037229314	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGCCTCCTGCCTCCTCT	-64816288	True	NA	-5	True	AATAAA	-20	NA	64825668	64815631	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_64815949_64816573_64816766_64817945_64818092_64818256_64818345_64819116_64819224_64819846_64819987_64820981_64821089_64821166_64821282_64821366_64821521_64822265_64822392_64822477_64822611_64823777_64824355_64825592
transcript_6527.known	chr1	-	3597	7	FSM	ENSG00000004455.17	ENST00000373449.7	3597	7	0	0	0	0	multi-exon	FALSE	canonical	3	600	junction_1	286.414278430544	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTCTGCATGCATTATC	-33016813	True	NA	-6	True	ATTAAA	-16	NA	33036883	33007985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_33010834_33013206_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33024441_33024568_33036735
transcript_65277.known	chr15	-	2690	13	FSM	ENSG00000140451.13	ENST00000559239.2	2690	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_12	124.000308019331	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGCCTCCTGCCTCCTCT	-64816267	True	NA	-5	True	AATAAA	-20	NA	64825647	64815631	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_64816358_64816573_64816766_64817945_64818092_64818256_64818345_64819116_64819224_64819846_64819987_64820981_64821089_64821166_64821282_64821366_64821521_64822265_64822392_64822477_64822611_64823777_64824355_64825568
transcript_65278.known	chr15	-	2687	13	FSM	ENSG00000140451.13	ENST00000268043.8	2687	13	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_9	80.4478350651319	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGCCTCCTGCCTCCTCT	-64816288	True	NA	-5	True	AATAAA	-20	NA	64825668	64815631	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_64816358_64816573_64816766_64817945_64818092_64818256_64818345_64819116_64819224_64819846_64819987_64820981_64821089_64821166_64821282_64821366_64821521_64822265_64822392_64822477_64822611_64823777_64824355_64825592
transcript_6528.nic	chr1	-	2807	7	NIC	ENSG00000004455.17	novel	2840	8	NA	NA	6	197	intron_retention	FALSE	canonical	3	85	junction_1	477.395945614213	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCCCTGTTGTGGCATTT	-33016826	True	NA	-7	True	AATAAA	-16	NA	33036896	33009921	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_33010834_33012073_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33024441_33024568_33036735
transcript_65287.nic	chr15	-	2699	13	NIC	ENSG00000140451.13	novel	2690	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	125	junction_6	104.096376284458	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGCCTCCTGCCTCCTCT	-64816267	True	NA	-5	True	AATAAA	-20	NA	64825647	64815631	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_64816358_64816573_64816766_64817945_64818092_64818256_64818345_64819116_64819224_64819846_64820020_64820981_64821089_64821166_64821282_64821366_64821521_64822265_64822392_64822477_64822611_64823777_64824355_64825592
transcript_6530.known	chr1	-	886	7	FSM	ENSG00000004455.17	ENST00000550338.5	886	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_6	616.846122536965	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGACTTGGTTATGTTT	-33016832	True	NA	NA	False	NA	NA	NA	33036902	33013206	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33024441_33024568_33031543_33031662_33036735
transcript_6531.known	chr1	-	5970	6	FSM	ENSG00000004455.17	ENST00000672715.1	5970	6	0	0	0	0	multi-exon	FALSE	canonical	3	1287	junction_3	40.1865649191368	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTCTGCATGCATTATC	-33016813	True	NA	-6	True	ATTAAA	-16	NA	33036883	33007985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33024441_33024568_33036735
transcript_6534.known	chr1	-	936	6	FSM	ENSG00000004455.17	ENST00000548033.5	936	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_5	530.08889820482	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCTCAGAACCCCATGG	-33016770	True	NA	NA	False	TTTAAA	-24	NA	33036840	33010477	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_33010834_33013206_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33036735
transcript_6537.known	chr1	-	5059	5	FSM	ENSG00000004455.17	ENST00000354858.11	5059	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	562.366595291719	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGGGTGAGCTATTGT	NA	False	NA	-15	True	AATAAA	-6	NA	33037004	33008891	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33036735
transcript_6538.known	chr1	-	811	5	FSM	ENSG00000004455.17	ENST00000480134.5	811	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	573.299823390868	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGGCGTGTGTGCTACT	-33016807	True	NA	-7	True	ATTAAA	-20	NA	33036877	33013043	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_33013403_33014521_33014595_33021592_33021704_33024441_33024568_33036735
transcript_6539.known	chr1	-	920	5	FSM	ENSG00000004455.17	ENST00000487289.1	920	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	586.664459039407	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTGTAGTCCATACCTT	-33016774	True	NA	NA	False	NA	NA	NA	33036844	33019682	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_33020162_33021366_33021462_33021592_33021704_33024441_33024568_33036735
transcript_6541.known	chr1	-	581	2	FSM	ENSG00000004455.17	ENST00000551979.1	581	2	0	0	0	0	multi-exon	FALSE	canonical	3	1377	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCACTGCAACCTCCACC	-33016798	True	NA	NA	False	NA	NA	NA	33036868	33024119	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_33024568_33036735
transcript_65439.nic	chr15	-	1675	4	ISM	ENSG00000140451.13	ENST00000268043.8	2687	13	-63	5934	-63	24	5prime_fragment	FALSE	canonical	3	292	junction_1	1.69967317119759	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGGCTTTGGGTATTAGC	NA	False	NA	NA	False	NA	NA	NA	64825731	64821565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_64822392_64822477_64822611_64823777_64824355_64825592
transcript_6544.known	chr1	+	1806	8	FSM	ENSG00000142920.17	ENST00000471119.5	1806	8	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	1.12485826771597	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGGAATCTGGCAGTTTGA	33081022	True	NA	10	True	AATAAA	-27	NA	33081154	33120530	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_33081509_33092049_33092223_33093281_33093417_33094547_33094714_33096706_33096870_33098066_33098180_33117901_33118117_33120043
transcript_6545.known	chr1	+	2048	11	FSM	ENSG00000142920.17	ENST00000373443.7	2048	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.48660687473185	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGGAATCTGGCAGTTTG	33081034	True	NA	9	True	AATAAA	-26	NA	33081166	33120529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_33081295_33081390_33081509_33082177_33082355_33083953_33084128_33092049_33092223_33093281_33093417_33094547_33094714_33096706_33096870_33098066_33098180_33117901_33118117_33120043
transcript_65451.known	chr15	-	1631	3	FSM	ENSG00000140451.13	ENST00000560444.1	1631	3	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_2	0.5	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-64816245	True	NA	NA	False	NA	NA	NA	64825625	64821589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_64822611_64823777_64824355_64825592
transcript_65456.known	chr15	-	1114	2	FSM	ENSG00000140451.13	ENST00000560504.1	1114	2	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAGAGAGC	-64816237	True	NA	NA	False	NA	NA	NA	64825617	64823265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_64824355_64825592
transcript_6546.nic	chr1	-	3300	6	NIC	ENSG00000116525.14	novel	3817	5	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_5	27.6362081335338	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTTCCATTCATTTTGA	-33180842	True	NA	0	True	ATTAAA	-22	NA	33182098	33145398	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_33147728_33158252_33158369_33159687_33159945_33165470_33165567_33181024_33181422_33181993
transcript_6547.nic	chr1	-	3345	6	NIC	ENSG00000116525.14	novel	3817	5	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_5	30.6555052152138	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTTCCATTCATTTTGA	-33180814	True	NA	0	True	ATTAAA	-22	NA	33182070	33145398	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_33147728_33158252_33158369_33159687_33159945_33165470_33165567_33181024_33181495_33181993
transcript_65473.known	chr15	+	3689	6	FSM	ENSG00000241839.10	ENST00000323544.5	3689	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	7.22218803410712	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGTGCCTCAAGCCTGT	64840217	True	NA	26	True	AATAAA	-16	NA	64841914	64868002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_64842029_64848592_64848743_64854920_64855038_64859893_64859999_64861476_64861576_64864898
transcript_65474.known	chr15	+	1477	6	FSM	ENSG00000166839.17	ENST00000496660.5	1477	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	8.18290901819151	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGGGTTGTGGCCTTTCTT	64911418	True	NA	6	True	AGTAAA	-24	NA	64911917	64932514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_64911965_64921920_64922020_64926065_64926171_64926900_64927000_64930821_64930921_64931486
transcript_65476.known	chr15	+	742	4	FSM	ENSG00000166839.17	ENST00000496480.5	742	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	13.1233464566864	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTAACCTCCGCCTCCTG	64911402	True	NA	NA	False	NA	NA	NA	64911901	64931967	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_64911965_64921920_64922020_64930821_64930921_64931486
transcript_65477.known	chr15	+	3569	5	FSM	ENSG00000241839.10	ENST00000616065.4	3569	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	38.1935858489354	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCAGTGCCTCAAGCCT	64840185	True	NA	24	True	AATAAA	-14	NA	64841882	64868000	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_64842029_64854920_64855038_64859893_64859999_64861476_64861576_64864898
transcript_65490.nic	chr15	-	1913	10	NIC	ENSG00000090487.11	novel	1799	9	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_9	344.263178110104	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGTCGCTTTTGTGATT	-64979893	True	NA	-6	True	AATAAA	-12	NA	64989928	64963026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_64963737_64965319_64965461_64969254_64969363_64970113_64970223_64974601_64974748_64976474_64976556_64980863_64981026_64983506_64983594_64989168_64989274_64989664
transcript_65495.known	chr15	-	1613	9	FSM	ENSG00000090487.11	ENST00000433215.6	1613	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	294.525784100476	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGTCGCTTTTGTGATT	-64979439	False	10035	-6	True	AATAAA	-12	NA	64989474	64963026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_64963737_64965319_64965461_64969254_64969363_64970113_64970223_64974601_64974748_64976474_64976556_64980863_64981026_64983506_64983594_64989405
transcript_65497.known	chr15	-	1799	9	FSM	ENSG00000090487.11	ENST00000204566.7	1799	9	0	0	0	0	multi-exon	FALSE	canonical	3	778	junction_2	73.827078365597	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTTTTGTGATTATTGT	-64979879	True	NA	-1	True	AATAAA	-17	NA	64989914	64963021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_64963737_64965319_64965461_64969254_64969363_64970113_64970223_64974601_64974748_64976474_64976556_64980863_64981026_64983506_64983594_64989664
transcript_6550.known	chr1	-	3817	5	FSM	ENSG00000116525.14	ENST00000291416.10	3817	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	10.779030568655	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTTCCATTCATTTTGA	-33180787	True	NA	0	True	ATTAAA	-22	NA	33182043	33145398	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_33147728_33158252_33158369_33159687_33159945_33165470_33165567_33181024
transcript_65501.nic	chr15	-	1854	8	NIC	ENSG00000090487.11	novel	1799	9	NA	NA	-115	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_7	281.735148459597	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGTCGCTTTTGTGATT	NA	False	NA	-6	True	AATAAA	-12	NA	64990061	64963026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_64963737_64965319_64965461_64969254_64969363_64970113_64970223_64974601_64974748_64976474_64976556_64980863_64981026_64989664
transcript_65504.known	chr15	-	1533	8	FSM	ENSG00000090487.11	ENST00000416889.6	1533	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	314.799579907922	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACATTGGTTATTTTATGC	-64979876	True	NA	41	True	NA	NA	NA	64989911	64963203	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_64963737_64965319_64965461_64969254_64969363_64970113_64970223_64974601_64974748_64980863_64981026_64983506_64983594_64989664
transcript_65513.nnic	chr15	-	1901	9	NNC	ENSG00000103707.10	novel	2746	9	NA	NA	0	68	intron_retention	FALSE	canonical	3	20	junction_8	74.6105513650717	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGGAGATTATCTTTCC	-65026259	True	NA	-3	True	AATAAA	-22	NA	65029639	65002509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_-_65003257_65004853_65004937_65006112_65006192_65016435_65016528_65020196_65020273_65021513_65021617_65023671_65023795_65026830_65027041_65029251
transcript_65514.known	chr15	-	2746	9	FSM	ENSG00000103707.10	ENST00000220058.9	2746	9	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	20.6424168885332	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGTGTGCAAACTCAT	-65026259	True	NA	-5	True	AATAAA	-13	NA	65029639	65001511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_65003257_65004853_65004937_65006112_65006192_65016435_65016528_65020196_65020273_65021513_65021617_65023671_65023795_65026830_65027041_65029404
transcript_65522.nic	chr15	-	1044	6	ISM	ENSG00000103707.10	ENST00000558460.5	1522	10	-47	13677	-24	0	5prime_fragment	FALSE	canonical	3	223	junction_4	18.6697616481839	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTATAGAGACCTTAGA	-65026283	True	NA	NA	False	TTTAAA	-1	NA	65029663	65016254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_65016528_65020196_65020273_65021513_65021617_65023671_65023795_65026830_65027041_65029404
transcript_65524.known	chr15	-	421	2	FSM	ENSG00000103707.10	ENST00000559633.1	421	2	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTATGCTTTCTGTAATAT	-65026152	False	NA	NA	False	TATAAA	-33	NA	65029532	65026747	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_65027041_65029404
transcript_65525.known	chr15	-	2519	5	FSM	ENSG00000103710.11	ENST00000220062.9	2519	5	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_4	7.94905654779232	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGTTTGCTTGCAGTTC	-65067517	True	NA	-4	True	AATAAA	-22	NA	65067991	65053336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_65055275_65058426_65058618_65059344_65059419_65065216_65065274_65067732
transcript_65526.known	chr15	-	1523	4	FSM	ENSG00000103710.11	ENST00000421977.7	1523	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	32.3144274623924	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTCTTTCACCAGCAGAC	-65067925	False	NA	NA	False	GATAAA	-39	NA	65067943	65054227	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_65055275_65058426_65058618_65059344_65059419_65067732
transcript_65527.known	chr15	-	7377	2	FSM	ENSG00000246922.10	ENST00000561387.1	7377	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAACAAAGTGATGCATAC	-65101595	False	NA	NA	False	ATTAAA	-11	NA	65101628	65093008	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_65093232_65094474
transcript_65529.known	chr15	-	2823	5	FSM	ENSG00000090470.15	ENST00000204549.9	2823	5	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_4	14.9164338901763	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGCCTTTGCTGCCAA	-65133475	True	NA	-8	True	AATAAA	-19	NA	65133808	65117378	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_65118841_65119375_65119464_65119717_65119955_65129031_65129171_65132911
transcript_65534.nic	chr15	-	1240	3	ISM	ENSG00000090470.15	ENST00000204549.9	2823	5	-15	2387	-15	-802	5prime_fragment	FALSE	canonical	3	89	junction_2	11	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTACTTCAGAAACGTGAA	-65133490	True	NA	NA	False	AAAAAG	-7	NA	65133823	65119765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_65119955_65129031_65129171_65132911
transcript_65535.nic	chr15	-	1185	3	ISM	ENSG00000090470.15	ENST00000204549.9	2823	5	-15	2442	-15	-857	5prime_fragment	FALSE	canonical	3	89	junction_2	11	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGGAAGAGAGGAAAAGAGA	-65133490	True	NA	NA	False	NA	NA	NA	65133823	65119820	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_65119955_65129031_65129171_65132911
transcript_6554.known	chr1	+	3187	9	FSM	ENSG00000160094.15	ENST00000539719.6	3187	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	22.7211355350035	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCGGTGGTGTTTGGCGT	33256416	False	NA	13	True	AATAAA	-17	NA	33256491	33300719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_33256655_33270486_33270613_33276099_33276164_33276347_33276595_33280123_33280458_33281586_33281812_33294936_33295016_33295146_33295306_33298929
transcript_65540.known	chr15	-	4695	14	FSM	ENSG00000166855.9	ENST00000300107.7	4695	14	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_4	31.171030398347	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAACGTGGTGGTGTGTCC	-65181101	True	NA	NA	False	AATAAA	-20	NA	65185342	65148218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_65150914_65152429_65152537_65153546_65153640_65154781_65155082_65155691_65155857_65156843_65156933_65157745_65157911_65158574_65158752_65162603_65162646_65164028_65164189_65166630_65166786_65178933_65179052_65180043_65180205_65185074
transcript_65547.nic	chr15	-	1675	11	ISM	ENSG00000166855.9	ENST00000300107.7	4695	14	-61	6749	-61	-289	5prime_fragment	FALSE	canonical	3	201	junction_1	26.0545581424825	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCGGTTATTGCGTCATGT	-65181162	True	NA	16	True	AAGAAA	-3	NA	65185403	65154967	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_65155082_65155691_65155857_65156843_65156933_65157745_65157911_65158574_65158752_65162603_65162646_65164028_65164189_65166630_65166786_65178933_65179052_65180043_65180205_65185074
transcript_65549.nic	chr15	-	1750	10	ISM	ENSG00000166855.9	ENST00000300107.7	4695	14	-267	7490	-267	977	5prime_fragment	FALSE	canonical	3	208	junction_4	24.2670329642684	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAGGAAAAATGAAAAGGTA	NA	False	NA	NA	False	NA	NA	NA	65185609	65155708	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_65155857_65156843_65156933_65157745_65157911_65158574_65158752_65162603_65162646_65164028_65164189_65166630_65166786_65178933_65179052_65180043_65180205_65185074
transcript_65553.nic	chr15	-	1098	7	ISM	ENSG00000166855.9	ENST00000558958.1	1493	9	-50	1922	-50	-417	5prime_fragment	FALSE	canonical	3	208	junction_1	26.1002341411379	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATATTTTGCTGCTTGGA	-65181151	True	NA	NA	False	CATAAA	-12	NA	65185392	65158607	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_65158752_65162603_65162646_65164028_65164189_65166630_65166786_65178933_65179052_65180043_65180205_65185074
transcript_65554.known	chr15	-	2734	6	FSM	ENSG00000138617.16	ENST00000649807.2	2734	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	10.2489023802552	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTTGCCTTTGTGAGT	-65286681	True	NA	-11	True	AATAAA	-21	NA	65286883	65258098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_65259543_65260884_65261027_65263148_65263321_65266561_65266769_65270934_65271073_65286252
transcript_65570.known	chr15	-	4441	14	FSM	ENSG00000174498.14	ENST00000327987.9	4441	14	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_1	39.3494434296707	251	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGTTTTTGGGTGGTT	-65374417	True	NA	-6	True	AATAAA	-21	NA	65378002	65327126	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_65329149_65329389_65329598_65329725_65329865_65330292_65330398_65330549_65330742_65331049_65331215_65331411_65331660_65331940_65332107_65333256_65333416_65334727_65334866_65335290_65335422_65335811_65335957_65375096_65375403_65377685
transcript_6564.known	chr1	-	2550	7	FSM	ENSG00000134686.20	ENST00000373418.7	2550	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	6.23609564462324	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGGTGCCTTTCTCC	-33349295	True	NA	-2	True	AATAAA	-14	NA	33349885	33323625	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_33325020_33328869_33329147_33330070_33330213_33331347_33331463_33332274_33332405_33334089_33334293_33349596
transcript_65645.known	chr15	-	7281	20	FSM	ENSG00000074603.19	ENST00000300141.11	7281	20	0	0	0	0	multi-exon	TRUE	canonical	3	38	junction_4	9.98974543471532	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTAAGTGTTCCTTTT	-65515412	True	NA	-3	True	AATAAA	-18	NA	65517689	65442466	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_65447007_65450998_65451111_65451959_65452103_65454262_65454416_65456224_65456372_65463760_65463907_65466677_65466814_65467070_65467224_65474208_65474289_65478879_65479040_65480221_65480400_65481514_65481616_65485098_65485161_65487689_65487819_65490188_65490300_65497863_65498033_65500605_65500780_65507242_65507356_65512294_65512565_65517485
transcript_65647.known	chr15	-	3125	20	FSM	ENSG00000074603.19	ENST00000321147.10	3125	20	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	18.9344985530925	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACATTAGCACCATGT	-65515427	True	NA	NA	False	ACTAAA	-14	NA	65517704	65446620	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_65447007_65450998_65451111_65451959_65452103_65456224_65456372_65463760_65463907_65466677_65466814_65467070_65467224_65474208_65474289_65478879_65479040_65480221_65480400_65481514_65481616_65485098_65485161_65487689_65487819_65490188_65490300_65497863_65498033_65500605_65500780_65507242_65507356_65512294_65512565_65515655_65515792_65517485
transcript_65659.known	chr15	-	561	3	FSM	ENSG00000074603.19	ENST00000560194.1	561	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	18.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCTTTTGTTTTTTT	-65515351	True	NA	4	True	AATAAA	-26	NA	65517628	65511960	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_65512109_65512294_65512565_65517485
transcript_65662.known	chr15	+	3228	11	FSM	ENSG00000074696.13	ENST00000261875.10	3228	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	490.633019679679	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAATGACTGTGCTTAAA	65513780	True	NA	20	True	ATTAAA	-17	NA	65530462	65578349	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_65530719_65551675_65551719_65554886_65554961_65556738_65556904_65558679_65558732_65562773_65562885_65564214_65564343_65570090_65570204_65571547_65571655_65572234_65572367_65576302
transcript_65669.known	chr15	+	1332	10	FSM	ENSG00000074696.13	ENST00000442729.6	1332	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	657.119715871967	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTATCTCATGTTCAGTC	65513799	True	NA	-48	True	NA	NA	NA	65530481	65576637	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_65530719_65551675_65551719_65554886_65554961_65558679_65558732_65562773_65562885_65564214_65564343_65570090_65570204_65571547_65571655_65572234_65572367_65576302
transcript_65678.known	chr15	+	393	2	FSM	ENSG00000074696.13	ENST00000566239.1	393	2	0	0	0	0	multi-exon	FALSE	canonical	3	1784	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTGAAGGAAAAAAAAAAAAA	65513905	False	NA	NA	False	TTTAAA	-35	NA	65530587	65551937	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_65530719_65551675
transcript_65688.known	chr15	-	2419	12	FSM	ENSG00000138614.16	ENST00000567744.5	2419	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_11	79.9162785059961	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCATTTTCAAGCTTCTG	-65608221	True	NA	NA	False	NA	NA	NA	65611121	65579026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605237_65607158_65607426_65610685
transcript_65689.known	chr15	-	2615	12	FSM	ENSG00000138614.16	ENST00000573314.5	2615	12	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_11	59.7605414470919	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGCTTTTGGTCTGTCTT	-65608236	True	NA	21	True	ACTAAA	-5	NA	65611136	65578752	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605237_65607158_65607443_65610795
transcript_6569.known	chr1	+	2367	4	FSM	ENSG00000121903.15	ENST00000373413.2	2367	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.69967317119759	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGGCATGCACCTGTAA	33472447	True	NA	NA	False	AATACA	-15	NA	33472650	33492636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_33472692_33479178_33479706_33488464_33488652_33491024
transcript_65690.known	chr15	-	2393	12	FSM	ENSG00000138614.16	ENST00000313182.7	2304	12	-114	25	-3	-22	multi-exon	FALSE	canonical	3	114	junction_11	51.5083239682338	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGGTTTCACTATGAAA	-65608345	True	NA	-8	True	AATAAA	-17	NA	65611245	65578781	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605237_65607158_65607443_65611097
transcript_65693.known	chr15	-	1797	12	FSM	ENSG00000138614.16	ENST00000569491.5	1797	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	122.534124105279	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGACCGGCAGGGGCTC	-65608231	True	NA	NA	False	NA	NA	NA	65611131	65579096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593570_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605233_65607301_65607426_65611097
transcript_65698.known	chr15	-	1741	11	FSM	ENSG00000138614.16	ENST00000420799.7	1741	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_10	83.7795321065951	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGCTTGAATGACTGAT	-65608342	True	NA	NA	False	NA	NA	NA	65611242	65579146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605237_65611097
transcript_65709.known	chr15	+	4895	5	FSM	ENSG00000103769.10	ENST00000261890.7	4895	5	0	0	0	0	multi-exon	FALSE	canonical	3	1133	junction_4	74.7039992236025	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTGTTTAATTTTTA	65851072	True	NA	30	True	AATATA	-29	NA	65869490	65891989	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_65869626_65877331_65877528_65877761_65877956_65879670_65879752_65887700
transcript_65718.known	chr15	+	3763	17	FSM	ENSG00000166938.13	ENST00000319194.9	3763	17	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	47.198674173646	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGTCTCCAATCAGTTCT	NA	False	NA	23	True	AATAAA	-18	NA	66293216	66333898	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_66293368_66294987_66295142_66306823_66306953_66308708_66308845_66311723_66311901_66314038_66314118_66315035_66315216_66318448_66318619_66320570_66320733_66322686_66322935_66323492_66323586_66325830_66326365_66328969_66329125_66329220_66329400_66331874_66332021_66332735_66332911_66333003
transcript_65727.known	chr15	+	3780	17	FSM	ENSG00000166938.13	ENST00000319212.9	3780	17	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_15	11.5650335062204	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGTCTCCAATCAGTTCT	66289629	True	NA	23	True	AATAAA	-18	NA	66293567	66333898	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_66293736_66294987_66295142_66306823_66306953_66308708_66308845_66311723_66311901_66314038_66314118_66315035_66315216_66318448_66318619_66320570_66320733_66322686_66322935_66323492_66323586_66325830_66326365_66328969_66329125_66329220_66329400_66331874_66332021_66332735_66332911_66333003
transcript_6575.nic	chr1	-	3194	13	ISM	ENSG00000121904.19	ENST00000373381.9	13655	71	-66	257422	-66	688	5prime_fragment	FALSE	canonical	2	13	junction_12	9.35822573402079	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCATGATATCTGCCCATC	-34165285	False	NA	NA	False	AATAAA	-1	NA	34165296	33771419	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_33772752_33788599_33788713_33792422_33792527_33810742_33810865_33819712_33819838_33820468_33820557_33825696_33825775_33846883_33846997_33918093_33918302_33935759_33935955_34032593_34032707_34088976_34089194_34164910
transcript_65757.known	chr15	+	2399	12	FSM	ENSG00000166938.13	ENST00000564909.5	2399	12	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_2	9.49728103761482	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTGTTCCTTGGTTTTT	66289657	True	NA	NA	False	AAAACA	-16	NA	66293595	66326561	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_66293736_66294987_66295142_66306823_66306953_66308708_66308845_66311723_66311901_66314038_66314118_66315035_66315216_66318448_66318619_66320570_66320733_66322686_66322935_66323492_66323586_66325830
transcript_6576.nic	chr1	-	3172	13	ISM	ENSG00000121904.19	ENST00000373381.9	13655	71	-155	257533	-155	577	5prime_fragment	FALSE	canonical	2	13	junction_12	9.35822573402079	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTTGATGACTTTTGAG	-34165374	False	94	NA	False	AATGAA	-27	NA	34165385	33771530	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_33772752_33788599_33788713_33792422_33792527_33810742_33810865_33819712_33819838_33820468_33820557_33825696_33825775_33846883_33846997_33918093_33918302_33935759_33935955_34032593_34032707_34088976_34089194_34164910
transcript_65765.known	chr15	-	1728	8	FSM	ENSG00000075131.10	ENST00000261881.9	1728	8	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_7	14.5377762665241	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACAGGCTTTATGGGAGG	-66352306	True	NA	-2	True	AGTAAA	-18	NA	66356685	66336190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_66337182_66341149_66341357_66349059_66349124_66349314_66349438_66351524_66351601_66352128_66352208_66352814_66352956_66356638
transcript_65769.known	chr15	-	1459	7	FSM	ENSG00000075131.10	ENST00000566524.5	1459	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	68.2731442239349	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTTTCACCATGTTGGC	-66352306	True	NA	NA	False	NA	NA	NA	66356685	66336383	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_66337182_66341149_66341357_66349059_66349124_66349314_66349438_66352128_66352208_66352814_66352956_66356638
transcript_6577.nic	chr1	-	2721	13	ISM	ENSG00000121904.19	ENST00000373381.9	13655	71	-155	257984	-155	126	5prime_fragment	FALSE	canonical	2	13	junction_12	9.35822573402079	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTTGGATGACCTGACC	-34165374	False	94	NA	False	NA	NA	NA	34165385	33771981	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_33772752_33788599_33788713_33792422_33792527_33810742_33810865_33819712_33819838_33820468_33820557_33825696_33825775_33846883_33846997_33918093_33918302_33935759_33935955_34032593_34032707_34088976_34089194_34164910
transcript_65778.known	chr15	+	2547	11	FSM	ENSG00000169032.11	ENST00000307102.10	2547	11	0	0	0	0	multi-exon	FALSE	canonical	3	461	junction_1	47.8472569746689	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGCTTTTGTGGTAAGC	66381797	True	NA	18	True	AATAAA	-36	NA	66386911	66491544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_66387428_66435026_66435238_66436745_66436893_66443279_66443358_66444655_66444708_66481754_66481880_66484989_66485192_66487227_66487293_66489214_66489277_66489717_66489764_66490501
transcript_65785.nnic	chr15	+	2334	9	FSM	ENSG00000169032.11	ENST00000686347.1	2209	9	-114	-11	-39	0	multi-exon	FALSE	canonical	3	22	junction_5	171.201589872875	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGCTTTTGTGGTAAGC	NA	False	NA	18	True	AATAAA	-36	NA	66386797	66491544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_66387428_66435026_66435238_66436745_66436893_66443279_66443358_66444655_66444708_66487227_66487293_66489214_66489277_66489717_66489764_66490501
transcript_65788.known	chr15	+	1338	5	FSM	ENSG00000169032.11	ENST00000425818.2	1338	5	0	0	0	0	multi-exon	FALSE	canonical	3	461	junction_1	24.6614577833509	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTTAGTTACCCAGTCTC	66381722	True	NA	NA	False	NA	NA	NA	66386836	66444966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_66387428_66435026_66435238_66436745_66436893_66443279_66443358_66444655
transcript_65791.known	chr15	-	749	4	FSM	ENSG00000174446.13	ENST00000395589.6	749	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	160.513758496481	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGGCAAGTCACCTCTT	-66497721	False	150775	NA	False	NA	NA	NA	66497750	66490305	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_66490718_66494414_66494553_66495329_66495420_66497641
transcript_65793.known	chr15	-	1069	3	FSM	ENSG00000174446.13	ENST00000565465.1	1069	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	175.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAAATAAATTTATAAGTA	-66497730	False	150775	-30	True	NA	NA	NA	66497759	66493843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_66494553_66495329_66495420_66497489
transcript_65794.known	chr15	-	1296	3	FSM	ENSG00000174446.13	ENST00000316634.6	1296	3	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_2	0.5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCAGGCTGCTCTCGAACT	-66497733	False	150775	NA	False	AGTAAA	-20	NA	66497762	66493467	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_66494553_66495329_66495420_66497641
transcript_65795.known	chr15	-	794	2	FSM	ENSG00000174446.13	ENST00000307979.7	794	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCACTTGAGACATCACT	-66497733	False	150775	-66	True	TATAAA	-24	NA	66497762	66493879	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_66494553_66497641
transcript_65799.known	chr15	+	3595	19	FSM	ENSG00000174442.12	ENST00000307897.10	3595	19	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_1	52.7546440527827	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTCTTAGACTAATTTT	66501583	True	NA	7	True	AATAAA	-19	NA	66505325	66550130	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_66505392_66508840_66508893_66513987_66514084_66515525_66515645_66518878_66519079_66520589_66520661_66521049_66521206_66523676_66523749_66527289_66527384_66527856_66527913_66528851_66528958_66529493_66529574_66532246_66532404_66532984_66533014_66535932_66536070_66537167_66537264_66540097_66540211_66546590_66546706_66548350
transcript_65804.known	chr15	+	3256	19	FSM	ENSG00000174442.12	ENST00000446801.6	3256	19	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	100.247548536881	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTGTTGGCATTTCTTG	NA	False	NA	92	True	AATAAA	-24	NA	66505116	66549487	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_66505392_66508745_66508893_66513987_66514084_66515525_66515645_66518878_66519079_66520589_66520661_66521049_66521206_66523676_66523749_66527289_66527384_66527856_66527913_66528851_66528958_66529493_66529574_66532246_66532404_66532984_66533014_66535932_66536070_66537167_66537264_66540097_66540211_66546590_66546706_66548350
transcript_65806.nic	chr15	+	2049	18	ISM	ENSG00000174442.12	ENST00000307897.10	3595	19	-234	3425	9	0	5prime_fragment	FALSE	canonical	3	419	junction_1	52.8336817179669	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTATGTTCACATTTTA	NA	False	NA	9	True	NA	NA	NA	66505091	66546705	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_66505392_66508840_66508893_66513987_66514084_66515525_66515645_66518878_66519079_66520589_66520661_66521049_66521206_66523676_66523749_66527289_66527384_66527856_66527913_66528851_66528958_66529493_66529574_66532246_66532404_66532984_66533014_66535932_66536070_66537167_66537264_66540097_66540211_66546590
transcript_65809.known	chr15	+	2206	18	FSM	ENSG00000174442.12	ENST00000535141.6	2206	18	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_1	132.327971500823	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAGAAAAGGGAGGAAGAT	NA	False	NA	NA	False	AAAACA	-22	NA	66504958	66548426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_66505392_66513987_66514084_66515525_66515645_66518878_66519079_66520589_66520661_66521049_66521206_66523676_66523749_66527289_66527384_66527856_66527913_66528851_66528958_66529493_66529574_66532246_66532404_66532984_66533014_66535932_66536070_66537167_66537264_66540097_66540211_66546590_66546706_66548350
transcript_65819.known	chr15	-	2552	12	FSM	ENSG00000188501.11	ENST00000537670.5	2552	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	8.69691690407374	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCATGCATTTTTCTCA	-66565685	True	NA	NA	False	GATAAA	-16	NA	66565964	66547467	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_66548606_66550040_66550105_66551661_66551862_66552042_66552170_66552983_66553259_66557721_66557884_66557981_66558037_66561005_66561102_66561186_66561316_66563515_66563626_66563910_66563999_66565856
transcript_65827.known	chr15	-	2741	10	FSM	ENSG00000174444.15	ENST00000307961.11	2741	10	0	0	0	0	multi-exon	FALSE	canonical	3	9516	junction_7	826.499550013694	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTTCAGGTTCTTTAC	-66354080	True	NA	NA	False	ATTAAA	-17	NA	66504855	66498014	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_66499653_66500055_66500177_66500292_66500377_66500948_66501106_66501374_66501505_66501787_66501913_66502611_66502751_66503057_66503165_66503357_66503530_66504787
transcript_65837.known	chr15	-	1099	6	FSM	ENSG00000174444.15	ENST00000566039.5	1099	6	0	0	0	0	multi-exon	FALSE	canonical	3	9516	junction_3	891.988251043701	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTAGATGAATTGTACGG	-66354071	True	NA	NA	False	NA	NA	NA	66504846	66501007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_66501505_66501787_66501913_66502611_66502751_66503057_66503165_66503357_66503530_66504787
transcript_65838.known	chr15	+	3828	4	FSM	ENSG00000137834.15	ENST00000288840.10	3828	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	4.96655480858378	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAGCTTAAAATAACTAACA	66701263	True	NA	NA	False	AATAAA	-16	NA	66702235	66782849	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_66704076_66711667_66711725_66716420_66716499_66780996
transcript_65842.known	chr15	+	6464	9	FSM	ENSG00000166949.17	ENST00000327367.9	6464	9	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_5	15.2786615905975	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTGTGCCAGGAGCTCA	67064619	True	NA	24	True	AATAAA	-15	NA	67065601	67195169	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_67066361_67164894_67165089_67165252_67165385_67166778_67166854_67170553_67170605_67181240_67181454_67184726_67184865_67187364_67187510_67190412
transcript_65844.nnic	chr15	-	2188	11	NNC	ENSG00000103591.13	novel	3132	10	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	147.088714726861	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTTTGTAATGCATATCA	-67250126	True	NA	-19	True	AATAAA	-20	NA	67254695	67201672	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_-_67202899_67203547_67203598_67204043_67204149_67205018_67205047_67208561_67208659_67209461_67209545_67231813_67231898_67235978_67236069_67236407_67236505_67236629_67236821_67254558
transcript_65849.known	chr15	-	2251	10	FSM	ENSG00000103591.13	ENST00000561452.5	2251	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_9	112.289088989861	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTACTGCAAATAAAAATCC	-67250106	True	NA	-53	True	TTTAAA	-13	NA	67254675	67201706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_67202899_67203547_67203598_67204043_67204149_67208561_67208659_67209461_67209545_67231813_67231898_67235978_67236069_67236407_67236505_67236629_67236821_67254413
transcript_6585.nnic	chr1	+	2296	8	NNC	ENSG00000142698.15	novel	2136	7	NA	NA	-5	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	16.0611077972059	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTGTGCCTGTTTATTT	34166862	False	NA	8	True	GATAAA	-19	NA	34166877	34219131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_34167172_34177954_34178110_34197224_34197914_34200771_34201033_34202083_34202260_34208156_34208235_34212209_34212407_34218685
transcript_65850.known	chr15	-	3132	10	FSM	ENSG00000103591.13	ENST00000261880.10	3132	10	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_5	32.0061722442468	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACTTGGTTTTTGGTTGT	-67250092	True	NA	NA	False	TTTAAA	-5	NA	67254661	67200666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_67202899_67203547_67203598_67204043_67204149_67208561_67208659_67209461_67209545_67231813_67231898_67235978_67236069_67236407_67236505_67236629_67236821_67254558
transcript_65853.known	chr15	+	4193	2	FSM	ENSG00000189227.6	ENST00000342683.6	4193	2	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	0	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTTGCAATGATTGAGG	67520181	True	NA	NA	False	AATAAA	-16	NA	67521130	67530146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_67521595_67526417
transcript_65854.known	chr15	-	1533	1	FSM	ENSG00000270964.1	ENST00000604760.1	1533	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTCCTCATGTACTTTT	-67542543	True	NA	NA	False	AATAAA	-10	NA	67542604	67541071	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_67541100_67542600
transcript_65859.known	chr15	+	2344	22	FSM	ENSG00000137764.20	ENST00000178640.10	2344	22	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	8.48474688515901	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTGCCATAAGAGTTGT	67542686	False	NA	24	True	AATAAA	-21	NA	67542702	67807114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_67543471_67550033_67550083_67563282_67563351_67580753_67580824_67585889_67585931_67586845_67586914_67592925_67592975_67600684_67600750_67630887_67630928_67646230_67646300_67646387_67646470_67658552_67658615_67664596_67664646_67692478_67692553_67693517_67693569_67703336_67703409_67727915_67727946_67748230_67748258_67748568_67748602_67769601_67769664_67772706_67772753_67806645
transcript_6586.nnic	chr1	+	2317	8	NNC	ENSG00000142698.15	novel	2136	7	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	14.8461497791618	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTGTGCCTGTTTATTT	34166889	False	NA	8	True	GATAAA	-19	NA	34166904	34219131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_34167172_34177906_34178110_34197224_34197914_34200771_34201033_34202083_34202260_34208156_34208235_34212209_34212407_34218685
transcript_65862.nnic	chr15	+	2309	21	NIC	ENSG00000137764.20	novel	2344	22	NA	NA	-35	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	14.0925512239623	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTGCCATAAGAGTTGT	67542651	False	NA	24	True	AATAAA	-21	NA	67542667	67807114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_67543471_67550033_67550083_67563282_67563351_67585889_67585931_67586845_67586914_67592925_67592975_67600684_67600750_67630887_67630928_67646230_67646300_67646387_67646470_67658552_67658615_67664596_67664646_67692478_67692553_67693517_67693569_67703336_67703409_67727915_67727946_67748230_67748258_67748568_67748602_67769601_67769664_67772706_67772753_67806645
transcript_65869.known	chr15	+	7980	14	FSM	ENSG00000033800.14	ENST00000249636.11	7980	14	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	17.547568485785	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTGAAATCATCTATTAT	68049188	True	NA	NA	False	AATAAA	-39	NA	68054314	68193847	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_68054351_68086305_68086751_68141945_68142031_68142289_68142338_68145815_68145907_68146565_68146701_68153589_68153696_68164730_68164805_68173731_68173893_68175636_68175768_68176473_68176655_68181211_68181355_68183629_68183668_68187541
transcript_6587.known	chr1	+	2136	7	FSM	ENSG00000142698.15	ENST00000373374.7	2136	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	9.41039614232874	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTGTGCCTGTTTATTT	34166867	False	NA	8	True	GATAAA	-19	NA	34166882	34219131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_34167172_34197224_34197914_34200771_34201033_34202083_34202260_34208156_34208235_34212209_34212407_34218685
transcript_65882.known	chr15	-	1053	7	FSM	ENSG00000128973.13	ENST00000636212.1	1053	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	23.6502290334223	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCACTGAGTCCCTGGCAC	-68220612	True	NA	NA	False	NA	NA	NA	68229713	68208148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_68208411_68209636_68209760_68211262_68211319_68211555_68211742_68214289_68214389_68218535_68218651_68229501
transcript_65883.known	chr15	-	2323	7	FSM	ENSG00000128973.13	ENST00000638076.1	2323	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	20.7015834069656	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGATTCAAGAATGAAGTAA	-68220641	True	NA	-53	True	NA	NA	NA	68229742	68207029	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_68208411_68209636_68209760_68211262_68211319_68211555_68211864_68214289_68214389_68218535_68218651_68229501
transcript_65885.known	chr15	-	900	7	FSM	ENSG00000128973.13	ENST00000564752.1	900	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	20.4565936123838	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCGCCTCTTCCTGGACA	-68220608	True	NA	NA	False	NA	NA	NA	68229709	68208326	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_68208411_68209636_68209760_68211262_68211319_68211648_68211864_68214289_68214389_68218535_68218651_68229501
transcript_65887.known	chr15	-	2228	7	FSM	ENSG00000128973.13	ENST00000249806.11	2228	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	15.5715195861619	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGTTAGAGGTGTTTTT	-68220627	True	NA	-15	True	AGTAAA	-18	NA	68229728	68206991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_68208411_68209636_68209760_68211262_68211319_68211674_68211864_68214289_68214389_68218535_68218651_68229501
transcript_65889.known	chr15	-	868	6	FSM	ENSG00000128973.13	ENST00000637450.1	868	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	12.6585939187573	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCCTGGGCTTTCTACA	-68220576	True	NA	NA	False	NA	NA	NA	68229677	68208185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_68208411_68209636_68209760_68211262_68211319_68211674_68211864_68214289_68214389_68229501
transcript_65890.known	chr15	-	874	6	FSM	ENSG00000128973.13	ENST00000637667.1	874	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	22.1684460438706	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGGAAGAAGTACCCGG	-68220602	True	NA	NA	False	NA	NA	NA	68229703	68208221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_68208411_68209636_68209760_68211262_68211319_68211674_68211864_68218535_68218651_68229501
transcript_65891.known	chr15	-	981	6	FSM	ENSG00000128973.13	ENST00000566347.5	981	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	21.4196171767845	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGAGAGCATGAGTGGGGTG	-68220617	True	NA	-112	True	AATACA	-34	NA	68229718	68208039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_68208411_68209636_68209760_68211262_68211319_68214289_68214389_68218535_68218651_68229501
transcript_65893.known	chr15	-	765	5	FSM	ENSG00000128973.13	ENST00000637494.1	765	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	24.1492753514469	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGGGTGGGAGGGTGG	-68220576	True	NA	NA	False	NA	NA	NA	68229677	68208115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_68208411_68209636_68209760_68211262_68211319_68218535_68218651_68229501
transcript_65894.known	chr15	-	3238	4	FSM	ENSG00000260007.3	ENST00000637054.1	3238	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	43.7137151119519	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTTATACAAACTGACAT	-68220576	True	NA	NA	False	AATAAA	-15	NA	68229677	68191354	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_68194113_68197439_68197629_68218535_68218651_68229501
transcript_65897.known	chr15	-	3389	3	FSM	ENSG00000260007.3	ENST00000562767.2	3389	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	37	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTAAGCTTTGTATTTA	-68220617	True	NA	-109	True	NA	NA	NA	68229718	68191129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_68194113_68197439_68197629_68229501
transcript_65903.known	chr15	-	894	3	FSM	ENSG00000128973.13	ENST00000636020.1	894	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	15.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACTAGCAGGAACTGCTG	-68220615	True	NA	NA	False	NA	NA	NA	68229716	68213824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_68214389_68218535_68218651_68229501
transcript_65910.known	chr15	+	7177	2	FSM	ENSG00000169018.6	ENST00000306917.5	7177	2	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTTGAGGTTTGTGTCT	68277734	False	NA	31	True	AGTAAA	-14	NA	68277744	68295862	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_68278666_68289606
transcript_65913.known	chr15	-	2440	7	FSM	ENSG00000140350.15	ENST00000465139.6	2440	7	0	0	0	0	multi-exon	FALSE	canonical	3	2353	junction_4	227.622250425763	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGAGGTTTACATATGGT	-68780431	True	NA	-11	True	TATAAA	-18	NA	68820895	68778534	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_68780143_68780409_68780474_68782955_68783054_68784396_68784596_68787412_68787536_68787769_68787920_68820697
transcript_6592.known	chr1	-	918	2	FSM	ENSG00000163866.9	ENST00000456842.1	918	2	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGTTCACTTTGGGGCA	-34851534	True	NA	93	True	NA	NA	NA	34859755	34855168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_34855983_34859651
transcript_6593.known	chr1	-	897	2	FSM	ENSG00000163866.9	ENST00000423898.1	897	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAGGAGGGATACCTGCA	-34851496	True	NA	-87	True	NA	NA	NA	34859717	34855348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_34855983_34859454
transcript_65931.known	chr15	-	707	3	FSM	ENSG00000140350.15	ENST00000495420.5	707	3	0	0	0	0	multi-exon	FALSE	canonical	3	2910	junction_1	8.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGTAGAACCCTAGTTTCAA	-68780433	True	NA	NA	False	NA	NA	NA	68820897	68787178	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_68787536_68787769_68787920_68820697
transcript_65937.known	chr15	-	724	5	FSM	ENSG00000140350.15	ENST00000560303.1	724	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1204.47218730862	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTGGTGGTATGGCAGC	-68780422	True	NA	NA	False	NA	NA	NA	68820886	68780419	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_68780471_68784384_68784596_68787412_68787536_68787769_68787920_68820697
transcript_6594.known	chr1	-	5694	2	FSM	ENSG00000163866.9	ENST00000521580.3	5694	2	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_1	0	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGTTAATCAGATCCT	-34851528	True	NA	0	True	ATTAAA	-15	NA	34859749	34850361	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_34855983_34859676
transcript_65941.known	chr15	+	5044	5	FSM	ENSG00000138604.10	ENST00000261858.7	5044	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	4.03112887414927	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACCTGGATATTTCTCTT	69159324	True	NA	NA	False	AATAAA	-20	NA	69160634	69272207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_69160758_69210315_69210407_69255793_69256393_69261086_69261330_69268219
transcript_65944.known	chr15	+	1308	3	FSM	ENSG00000138604.10	ENST00000559798.2	1308	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTATAATATAATGATTTA	69159273	True	NA	2	True	AATAAA	-16	NA	69160583	69197458	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_69160758_69194435_69194526_69196414
transcript_65945.nnic	chr15	+	1201	2	NIC	ENSG00000138604.10	novel	1308	3	NA	NA	-35	-52	combination_of_known_splicesites	FALSE	canonical	3	42	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGATTGTAATGTTTC	69159238	True	NA	8	True	AATAAA	-26	NA	69160548	69197406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_69160758_69196414
transcript_6595.known	chr1	+	1355	2	FSM	ENSG00000189280.3	ENST00000338513.1	1355	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGGTGCCCTCTGGTTGT	34754975	True	NA	2	True	AATAAA	-20	NA	34755046	34758512	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_34755196_34757306
transcript_65955.known	chr15	+	5372	9	FSM	ENSG00000137819.14	ENST00000395407.7	5372	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	9.37333318515884	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGGCCACTGTCCTAGG	69297725	True	NA	NA	False	AGTAAA	-34	NA	69298911	69407780	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_69299057_69337340_69337502_69359965_69360132_69379882_69380011_69384676_69384883_69389653_69389781_69397467_69397565_69399973_69400116_69403580
transcript_6596.known	chr1	+	2192	2	FSM	ENSG00000188910.8	ENST00000373366.3	2192	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTTGGCTCTGTCTCTGG	34781164	True	NA	NA	False	AATAAA	-15	NA	34781213	34786364	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_34781779_34784737
transcript_65962.known	chr15	+	3660	24	FSM	ENSG00000137807.16	ENST00000679126.1	3660	24	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_7	118.954122147168	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTTGTGTGATGGCTGT	69410088	True	NA	105	True	ATTAAA	-21	NA	69414348	69448425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_69414477_69415993_69416064_69417382_69417512_69421646_69421753_69421991_69422129_69422325_69422436_69423158_69423330_69425281_69425324_69426069_69426183_69426335_69426458_69429110_69429214_69435482_69435563_69435651_69435772_69436137_69436262_69436563_69436723_69438247_69438406_69439903_69440078_69440307_69440488_69440767_69441080_69444789_69445042_69446008_69446092_69446282_69446365_69446870_69446942_69447791
transcript_65965.nic	chr15	+	3429	23	NIC	ENSG00000137807.16	novel	3660	24	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_7	115.431180527692	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTTGTGTGATGGCTGT	NA	False	NA	105	True	ATTAAA	-21	NA	69414267	69448425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_69414477_69415993_69416064_69417382_69417512_69421646_69421753_69421991_69422129_69422325_69422436_69423158_69423330_69425281_69425324_69426069_69426183_69426335_69426458_69429110_69429214_69435482_69435563_69435651_69435772_69436137_69436262_69436563_69436723_69438247_69438406_69439903_69440078_69440307_69440488_69444789_69445042_69446008_69446092_69446282_69446365_69446870_69446942_69447791
transcript_65966.known	chr15	+	3620	23	FSM	ENSG00000137807.16	ENST00000647715.1	3620	23	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_17	76.3948664494854	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGTGTGATGGCTGTTC	69410088	True	NA	107	True	ATTAAA	-23	NA	69414348	69448427	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_69414477_69415993_69416064_69417382_69417512_69421646_69421753_69421991_69422129_69422325_69422436_69423158_69423330_69426069_69426183_69426335_69426458_69429110_69429214_69435482_69435563_69435651_69435772_69436137_69436262_69436563_69436723_69438247_69438406_69439903_69440078_69440307_69440488_69440767_69441080_69444789_69445042_69446008_69446092_69446282_69446365_69446870_69446942_69447791
transcript_65969.known	chr15	+	3351	22	FSM	ENSG00000137807.16	ENST00000352331.8	3351	22	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_17	63.8825452830171	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTTGTGTGATGGCTGT	69410043	True	NA	105	True	ATTAAA	-21	NA	69414303	69448425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_69414477_69415993_69416064_69417382_69417512_69421646_69421753_69421991_69422129_69422325_69422436_69423158_69423330_69426069_69426183_69426335_69426458_69429110_69429214_69435482_69435563_69435651_69435772_69436137_69436262_69436563_69436723_69438247_69438406_69439903_69440078_69440307_69440488_69444789_69445042_69446008_69446092_69446282_69446365_69446870_69446942_69447791
transcript_6597.known	chr1	-	922	3	FSM	ENSG00000243749.1	ENST00000373337.3	922	3	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	18.5	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATGTCTCTTTTGCCTC	-34983192	True	NA	-9	True	TATAAA	-12	NA	34985353	34981534	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_34982120_34983766_34983948_34985197
transcript_65976.nic	chr15	+	3250	21	NIC	ENSG00000137807.16	novel	3351	22	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_4	102.206115276925	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTTGTGTGATGGCTGT	NA	False	NA	105	True	ATTAAA	-21	NA	69414267	69448425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_69414477_69415993_69416064_69417382_69417512_69421646_69421753_69422325_69422436_69423158_69423330_69426069_69426183_69426335_69426458_69429110_69429214_69435482_69435563_69435651_69435772_69436137_69436262_69436563_69436723_69438247_69438406_69439903_69440078_69440307_69440488_69444789_69445042_69446008_69446092_69446282_69446365_69446870_69446942_69447791
transcript_65983.nic	chr15	+	1908	16	ISM	ENSG00000137807.16	ENST00000559279.6	3129	22	-91	10036	-5	0	5prime_fragment	FALSE	canonical	3	54	junction_7	116.463365723113	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATAGAACGACTGGAAAA	NA	False	NA	NA	False	ACTAAA	-35	NA	69414267	69438360	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_69414477_69415993_69416064_69417382_69417512_69421646_69421753_69421991_69422129_69422325_69422436_69423158_69423330_69425281_69425324_69426069_69426183_69426335_69426458_69429110_69429214_69435482_69435563_69435651_69435772_69436137_69436262_69436563_69436723_69438247
transcript_65984.known	chr15	+	3723	23	FSM	ENSG00000137807.16	ENST00000260363.9	3723	23	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_17	76.3948664494854	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGTGTGATGGCTGTTC	NA	False	NA	107	True	ATTAAA	-23	NA	69414245	69448427	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_69414477_69415993_69416064_69417382_69417512_69421646_69421753_69421991_69422129_69422325_69422436_69423158_69423330_69426069_69426183_69426335_69426458_69429110_69429214_69435482_69435563_69435651_69435772_69436137_69436262_69436563_69436723_69438247_69438406_69439903_69440078_69440307_69440488_69440767_69441080_69444789_69445042_69446008_69446092_69446282_69446365_69446870_69446942_69447791
transcript_65997.nic	chr15	+	1053	8	ISM	ENSG00000137807.16	ENST00000395392.6	3357	23	-25	21942	-5	4274	5prime_fragment	FALSE	canonical	3	324	junction_7	41.51714669131	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACCTAGAACTAGAAAAATA	NA	False	NA	NA	False	NA	NA	NA	69414267	69426190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_69414477_69415993_69416064_69417382_69417512_69421646_69421753_69421991_69422129_69422325_69422436_69423158_69423330_69426069
transcript_65999.known	chr15	+	1174	4	FSM	ENSG00000137818.12	ENST00000260379.11	1174	4	0	0	0	0	multi-exon	FALSE	canonical	3	21541	junction_3	1482.43365974858	7001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACATGCCAGGCACATGAA	69276386	True	NA	68	True	AATAAA	-31	NA	69452817	69456205	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_69453021_69453646_69453722_69455169_69455288_69455427
transcript_66.known	SIRV1	-	1561	6	FSM	SIRV1A	SIRV101	1561	6	0	0	0	0	multi-exon	FALSE	canonical	3	1688	junction_5	2318.84911108938	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10786	1000	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV1_-_1485_6337_6474_6560_6814_7552_7815_10282_10367_10444
transcript_66001.known	chr15	+	1962	3	FSM	ENSG00000137818.12	ENST00000487304.6	1962	3	0	0	0	0	multi-exon	FALSE	canonical	3	21541	junction_2	1403	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTGGTCTTGTCCAT	69276387	True	NA	32	True	AATAAA	-14	NA	69452818	69455546	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_69453021_69453646_69455288_69455427
transcript_66002.known	chr15	+	445	3	FSM	ENSG00000137818.12	ENST00000357790.5	445	3	0	0	0	0	multi-exon	FALSE	canonical	3	1049	junction_1	10246	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTGGTCTTGTCCATA	69276382	True	NA	33	True	AATAAA	-15	NA	69452813	69455547	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_69453021_69455169_69455288_69455427
transcript_66012.known	chr15	-	6004	20	FSM	ENSG00000140332.18	ENST00000558939.5	6004	20	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_8	30.3225504156875	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAAAGTGTCTGTGAACA	-70098090	False	NA	-4	True	ATTAAA	-22	NA	70098176	70047789	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_70050205_70051390_70051468_70052373_70052525_70053226_70053375_70054437_70054686_70055048_70055299_70056297_70056375_70057458_70057659_70058149_70058292_70058662_70058816_70059409_70059461_70060529_70060650_70064453_70064471_70066013_70066219_70074532_70074608_70076095_70076159_70094531_70094577_70095577_70095642_70096160_70096262_70096774
transcript_66014.known	chr15	-	2304	20	FSM	ENSG00000140332.18	ENST00000558379.5	2304	20	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_8	30.8652688299421	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGAACTCCAGCAGGGCT	-70096712	False	NA	NA	False	NA	NA	NA	70096798	70050096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_70050205_70051390_70051468_70052373_70052525_70053226_70053375_70054437_70054686_70055048_70055299_70056297_70056375_70057473_70057659_70058149_70058292_70058662_70058816_70059409_70059461_70060529_70060650_70064453_70064471_70066013_70066219_70074532_70074608_70076095_70076159_70094531_70094577_70095577_70095642_70096160_70096262_70096774
transcript_66025.known	chr15	-	1575	9	FSM	ENSG00000140332.18	ENST00000559191.5	1575	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	51.603657816089	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTGGAGGCTTATGGC	-70093736	True	NA	-38	True	NA	NA	NA	70097866	70049835	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_70050205_70051390_70051468_70052373_70052525_70053226_70053375_70054437_70054686_70055048_70055299_70056297_70056375_70057473_70057520_70097657
transcript_66026.known	chr15	-	6904	19	FSM	ENSG00000137831.15	ENST00000322954.11	6904	19	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_8	28.4602820492171	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTTAAATCTTTAATATT	-70760897	True	NA	NA	False	AATAAA	-22	NA	70763558	70654553	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_70657128_70660150_70660217_70664661_70664815_70666723_70669463_70671038_70671092_70671964_70672002_70676492_70676592_70677107_70677141_70678098_70678207_70679607_70679677_70682757_70682796_70684264_70684447_70687539_70687647_70687749_70687821_70690453_70690512_70691298_70691364_70695016_70695106_70699526_70699661_70763329
transcript_66035.nic	chr15	-	2262	4	ISM	ENSG00000137831.15	ENST00000560441.5	4723	19	33735	3	3400	0	3prime_fragment	FALSE	canonical	3	208	junction_1	5.09901951359278	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTAGGTTTTTTTTTA	NA	False	NA	-25	True	AATAAA	-14	NA	70668573	70656934	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_70657128_70660150_70660217_70664661_70664815_70666723
transcript_66036.known	chr15	+	6176	16	FSM	ENSG00000137821.12	ENST00000260382.10	6176	16	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	9.22942155404239	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCATAGTGTACTTGCGG	70892172	True	NA	NA	False	AATAAA	-22	NA	70892825	71053658	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_70892943_70893583_70893641_70895848_70895937_70900921_70901025_70904551_70904756_70911531_70911599_70919049_70919194_70936760_70936823_70963784_70963933_70980100_70980185_70984093_70984258_71008378_71008617_71009806_71009993_71012803_71012914_71037178_71037333_71049408
transcript_6604.known	chr1	+	3055	11	FSM	ENSG00000197056.11	ENST00000488455.5	3055	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	47.5966385367706	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAGAAGAAAAATTCAG	35074308	True	NA	NA	False	TTTAAA	-20	NA	35079385	35114636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_35079443_35093319_35093442_35093913_35094084_35095818_35095892_35097316_35097567_35104294_35104470_35104556_35104770_35110293_35110448_35111775_35111913_35112086_35112131_35112976
transcript_66040.known	chr15	-	4467	3	FSM	ENSG00000166173.11	ENST00000299213.10	4467	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	4	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTATGGGCCAGGCAT	-70851797	True	NA	NA	False	AATAAA	-17	NA	70854157	70829129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_70833117_70836294_70836506_70853888
transcript_66041.known	chr15	-	527	2	FSM	ENSG00000166173.11	ENST00000344870.4	527	2	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATTGATCATCTCCCCA	-70851761	True	NA	3	True	AATAAA	-36	NA	70854121	70851426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_70851721_70853888
transcript_66042.known	chr15	-	2047	3	FSM	ENSG00000129028.9	ENST00000249861.9	2047	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	2.5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTGAGCCTGAACAATGA	-70891962	True	NA	-15	True	AATAAA	-18	NA	70892433	70881341	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_70882651_70882760_70882909_70891843
transcript_66047.known	chr15	-	12478	42	FSM	ENSG00000066933.16	ENST00000356056.10	12478	42	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_16	6.49669297652059	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATATGTGTGGTTTGTTT	-72116618	True	NA	-2	True	ATTAAA	-21	NA	72118150	71822290	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_71827044_71827883_71828027_71830108_71830312_71848844_71848969_71850035_71850168_71851252_71851359_71852131_71852261_71854376_71854570_71859734_71859797_71862499_71862612_71875790_71875839_71878039_71878232_71879720_71879838_71880334_71880559_71883593_71883737_71888003_71888117_71893678_71893779_71897460_71899033_71899686_71900007_71901190_71901341_71902940_71903064_71903928_71904040_71904925_71905007_71916369_71916493_71933669_71933710_71935340_71935485_71938851_71938928_71951776_71951897_71959900_71960097_71967983_71968126_71978170_71978293_71991102_71991238_71994468_71994586_71999850_71999941_72007825_72007953_72010349_72010448_72019038_72019096_72020917_72021018_72027730_72027794_72032493_72032589_72045723_72046635_72117679
transcript_66054.known	chr15	+	4178	2	FSM	ENSG00000166192.15	ENST00000340912.6	4178	2	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGCCTCCATCTCGTCTC	72117802	True	NA	NA	False	AATAAA	-17	NA	72118402	72143692	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_72118465_72139576
transcript_66057.known	chr15	-	3284	12	FSM	ENSG00000175318.12	ENST00000309731.12	3284	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	4.87021644944686	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGGTATAGAAAGTTCAT	-72197396	False	216	0	True	AATAAA	-22	NA	72197787	72159805	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72162013_72162272_72162378_72163265_72163477_72163612_72163758_72165353_72165411_72166631_72166704_72166993_72167093_72167735_72167840_72168490_72168567_72168938_72168997_72169846_72169940_72197730
transcript_66095.known	chr15	-	2305	11	FSM	ENSG00000067225.20	ENST00000335181.10	2305	11	0	0	0	0	multi-exon	FALSE	canonical	1	2003	junction_4	2785.53535429009	19122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTCTCTTTTCTGCT	-72176175	True	NA	-4	True	AATAAA	-17	NA	72231190	72199028	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72199757_72200473_72200656_72202453_72202621_72206727_72206881_72207126_72207278_72208620_72208892_72209672_72209860_72210346_72210479_72217408_72217501_72218943_72219111_72231115
transcript_6610.known	chr1	+	4161	10	FSM	ENSG00000197056.11	ENST00000359858.9	4161	10	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	21.5807413000974	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGATCTTTCCTAATC	35074307	True	NA	9	True	ATTAAA	-21	NA	35079384	35115859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_35079443_35093913_35094084_35095818_35095892_35097316_35097567_35104294_35104470_35104556_35104770_35110293_35110448_35111771_35111913_35112086_35112131_35112976
transcript_66109.known	chr15	-	2503	11	FSM	ENSG00000067225.20	ENST00000565184.6	2503	11	0	0	0	0	multi-exon	FALSE	canonical	1	99	junction_10	4498.60654091909	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTTTCCTCTCTTTTCT	-72176156	True	NA	-7	True	AATAAA	-14	NA	72231171	72199031	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72199757_72200473_72200656_72203021_72203189_72206727_72206881_72207126_72207278_72208620_72208892_72209672_72209860_72210346_72210479_72217408_72217501_72218943_72219111_72230895
transcript_66110.known	chr15	-	2717	11	FSM	ENSG00000067225.20	ENST00000319622.10	2717	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	4511.89498548005	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTCTCTTTTCTGCT	-72231374	False	NA	-4	True	AATAAA	-17	NA	72231386	72199028	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72199757_72200473_72200656_72203021_72203189_72206727_72206881_72207126_72207278_72208620_72208892_72209672_72209860_72210346_72210479_72217408_72217501_72218943_72219111_72230899
transcript_66157.nic	chr15	-	2788	23	NIC	ENSG00000137817.17	novel	2625	23	NA	NA	-115	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_13	42.0847482237669	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGATCACTGTGGTTTGA	-72272177	False	NA	-8	True	AATAAA	-30	NA	72272686	72241181	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_72241558_72241900_72241986_72242156_72242221_72242619_72242700_72250019_72250093_72250844_72250955_72251206_72251256_72253436_72253505_72254454_72254521_72256464_72256591_72257347_72257441_72258036_72258133_72259607_72259657_72260533_72260689_72261557_72261708_72264554_72264622_72265080_72265172_72265412_72265474_72265896_72265992_72266744_72266823_72267474_72267672_72271022_72271288_72272392
transcript_66163.nic	chr15	-	4034	22	NIC	ENSG00000137817.17	novel	2625	23	NA	NA	172	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	36.5130362207658	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGATCACTGTGGTTTGA	NA	False	NA	-8	True	AATAAA	-30	NA	72272827	72241181	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_72241558_72241900_72241986_72242156_72242221_72242619_72242700_72250019_72250093_72250844_72250955_72251206_72251256_72253436_72253505_72254454_72254521_72256464_72256591_72257347_72257441_72258036_72258133_72259607_72259657_72260533_72260689_72261557_72261708_72264554_72264622_72265080_72265172_72265412_72265474_72265896_72265992_72266744_72266823_72267474_72267672_72271022
transcript_66168.known	chr15	-	2305	22	FSM	ENSG00000137817.17	ENST00000565443.5	2305	22	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_13	34.4896711345003	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTGCTGTGGACTGGATA	-72270542	False	NA	-25	True	AATAAA	-13	NA	72271051	72241198	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72241558_72241900_72241986_72242156_72242221_72242619_72242700_72250019_72250093_72250844_72250958_72251206_72251256_72253436_72253505_72254454_72254521_72256464_72256591_72257347_72257441_72258036_72258133_72259607_72259662_72260477_72260689_72261557_72261708_72264554_72264622_72265080_72265172_72265412_72265474_72265896_72265992_72266744_72266823_72267474_72267672_72271022
transcript_66180.known	chr15	-	2271	21	FSM	ENSG00000137817.17	ENST00000567440.5	2271	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	35.4291899427577	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTGTAAATAAAACAATAAA	-72270706	False	NA	-49	True	NA	NA	NA	72271215	72241222	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72241558_72241900_72241986_72242156_72242221_72242619_72242700_72250019_72250093_72251206_72251256_72253436_72253505_72254454_72254521_72256464_72256591_72257347_72257441_72258036_72258133_72259607_72259657_72260533_72260689_72261557_72261708_72264554_72264622_72265080_72265172_72265412_72265474_72265896_72265992_72266744_72266823_72267474_72267672_72271022
transcript_66193.known	chr15	-	1892	15	FSM	ENSG00000213614.11	ENST00000683681.1	1892	15	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	92.1510793673706	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAATGTGGCATTTTTCTA	-72374367	True	NA	-56	True	AATAAA	-2	NA	72376009	72343911	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72344141_72345445_72345551_72345676_72345777_72346234_72346326_72346526_72346711_72347685_72347759_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72353690_72353738_72355558_72355625_72356524_72356618_72375719
transcript_66198.known	chr15	-	4785	14	FSM	ENSG00000213614.11	ENST00000268097.10	4785	14	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_5	30.2543458661228	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTCTAGCCGAGCCACC	-72374372	True	NA	-13	True	AATAAA	-28	NA	72376014	72340923	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72344141_72345445_72345551_72346234_72346326_72346526_72346711_72347685_72347759_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72353690_72353738_72355558_72355625_72356524_72356618_72375719
transcript_66201.nic	chr15	-	2424	14	NIC	ENSG00000213614.11	novel	1892	15	NA	NA	-44	0	intron_retention	FALSE	canonical	3	23	junction_2	71.0206237235554	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGGATTACCTGTGTTT	-72374416	False	NA	-31	True	AATAAA	-27	NA	72376058	72343886	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_72344141_72345445_72345551_72345676_72346326_72346526_72346711_72347685_72347759_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72353690_72353738_72355558_72355625_72356524_72356618_72375719
transcript_66203.known	chr15	-	2261	14	FSM	ENSG00000213614.11	ENST00000683860.1	2261	14	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	73.4510262313459	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGCATCCTGGCCAGGG	-72374367	True	NA	NA	False	NA	NA	NA	72376009	72344020	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72344141_72345445_72346129_72346234_72346326_72346526_72346711_72347685_72347759_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72353690_72353738_72355558_72355625_72356524_72356618_72375719
transcript_66205.known	chr15	-	1743	13	FSM	ENSG00000213614.11	ENST00000567411.5	1743	13	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_10	73.3637720919226	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGGCATTTTTCTATAAT	-72374361	True	NA	-52	True	AATAAA	-6	NA	72376003	72343907	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72344141_72345445_72345551_72346234_72346326_72346526_72346711_72347685_72347759_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72355558_72355625_72356524_72356618_72375719
transcript_66212.known	chr15	-	2953	13	FSM	ENSG00000213614.11	ENST00000684263.1	2953	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	79.4405787715293	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTCTAGGCACTGTGGT	-72374361	True	NA	-12	True	ATTAAA	-8	NA	72376003	72343445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72344141_72345445_72346326_72346526_72346711_72347685_72347759_72348030_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72353690_72353738_72355558_72355625_72356524_72356618_72375719
transcript_66213.known	chr15	-	1582	13	FSM	ENSG00000213614.11	ENST00000567159.5	1582	13	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_4	31.4717686541799	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGATCCAGGGCTGGGG	-72374351	True	NA	NA	False	NA	NA	NA	72375993	72345410	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72345551_72346234_72346326_72346526_72346711_72347685_72347759_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72353690_72353738_72355558_72355625_72356524_72356618_72375719
transcript_66215.known	chr15	-	2075	12	FSM	ENSG00000213614.11	ENST00000684231.1	2075	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_9	77.7347683786093	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATATTGTTCTCTAGGC	-72374350	True	NA	-20	True	TTTAAA	-10	NA	72375992	72343453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72344141_72345445_72345551_72346234_72346326_72346526_72346711_72347685_72347759_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72355558_72355625_72356524_72356618_72375719
transcript_66220.known	chr15	-	1987	12	FSM	ENSG00000213614.11	ENST00000684125.1	1987	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	80.3801916308463	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATATTGTTCTCTAGGC	-72374361	True	NA	-20	True	TTTAAA	-10	NA	72376003	72343453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72344141_72345445_72345551_72346234_72346326_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72353690_72353738_72355558_72355625_72356524_72356618_72375719
transcript_66223.known	chr15	-	2451	12	FSM	ENSG00000213614.11	ENST00000684520.1	2451	12	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_3	32.1882376750902	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATAACAACTATTTACAT	-72374367	True	NA	-12	True	AATAAA	-7	NA	72376009	72345241	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72346326_72346526_72346711_72347685_72347759_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72353690_72353738_72355558_72355625_72356524_72356618_72375719
transcript_66225.known	chr15	-	3477	12	FSM	ENSG00000213614.11	ENST00000683853.1	3477	12	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	80.0261320955962	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATATTGTTCTCTAGGCA	-72374361	True	NA	-19	True	ATTAAA	-1	NA	72376003	72343452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72345551_72346234_72346326_72346526_72346711_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72353690_72353738_72355558_72355625_72356524_72356618_72375719
transcript_66241.known	chr15	-	1000	2	FSM	ENSG00000213614.11	ENST00000567213.2	1000	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGAGATGCCTTTCCT	-72374347	True	NA	NA	False	AATAAA	-23	NA	72375989	72369958	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72370689_72375719
transcript_66242.known	chr15	-	2233	11	FSM	ENSG00000213614.11	ENST00000683884.1	2233	11	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	82.5269047038601	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAAAATGGTACAAATA	-72374361	True	NA	-40	True	GATAAA	-25	NA	72376003	72345269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72346326_72347685_72347759_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72353690_72353738_72355558_72355625_72356524_72356618_72375719
transcript_66249.known	chr15	+	21679	14	FSM	ENSG00000166233.15	ENST00000379887.9	21679	14	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_8	22.8827730350836	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGGTCCCTTTTGTTGA	72466986	True	NA	NA	False	GATAAA	-6	NA	72474329	72602987	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_72475015_72518066_72518135_72544819_72544965_72555270_72555364_72555851_72555908_72561482_72561550_72563393_72563501_72566562_72566606_72567105_72567178_72570176_72570308_72572107_72572166_72580730_72580992_72582074_72582188_72583207
transcript_66260.known	chr15	-	2325	1	FSM	ENSG00000261423.2	ENST00000565181.1	2325	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGTAGTCTAGGTTTTT	-72475108	True	NA	NA	False	AGTAAA	-15	NA	72475168	72472843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72472800_72475200
transcript_66262.known	chr15	+	1876	17	FSM	ENSG00000140463.14	ENST00000567279.5	1876	17	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	136.950022248081	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAACTGGCAGCAAGGCT	72682395	True	NA	NA	False	NA	NA	NA	72686206	72737824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_72686252_72695176_72695229_72704423_72704482_72709699_72709780_72712243_72712308_72715290_72715403_72716777_72716851_72722793_72722848_72724527_72724656_72727939_72727995_72729615_72729685_72731304_72731458_72731554_72731727_72735112_72735183_72735824_72735967_72736761_72736964_72737477
transcript_66269.known	chr15	+	2467	16	FSM	ENSG00000140463.14	ENST00000268057.9	2467	16	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_1	33.623007995518	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCACGGTCTTCCCTTAC	72682395	True	NA	12	True	AATAAA	-17	NA	72686206	72738473	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_72686252_72695176_72695229_72709699_72709780_72712243_72712308_72715290_72715403_72716777_72716851_72722793_72722848_72724527_72724656_72727939_72727995_72729615_72729685_72731304_72731458_72731554_72731727_72735112_72735183_72735824_72735967_72736761_72736964_72737477
transcript_66279.known	chr15	+	1864	16	FSM	ENSG00000140463.14	ENST00000562084.5	1864	16	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	104.386376292865	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAGAGAGAAATAAGAA	72682408	True	NA	NA	False	NA	NA	NA	72686219	72737570	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_72686565_72695176_72695229_72709699_72709780_72712243_72712308_72715290_72715403_72716777_72716851_72722793_72722848_72724527_72724656_72727939_72727995_72729615_72729685_72731304_72731458_72731554_72731727_72735112_72735183_72735824_72735967_72736761_72736964_72737477
transcript_6628.known	chr1	+	3980	9	FSM	ENSG00000197056.11	ENST00000373329.5	3980	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	34.9890607904814	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATGTTTTGATCTTTCC	35074313	True	NA	4	True	ATTAAA	-16	NA	35079390	35115854	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_35079443_35095818_35095892_35097316_35097567_35104294_35104470_35104556_35104770_35110293_35110448_35111771_35111913_35112086_35112131_35112976
transcript_66287.nic	chr15	+	2036	15	NIC	ENSG00000140463.14	novel	2467	16	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_9	107.112400433053	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTTAAAAGAAAAAAAACAA	72682371	True	NA	3	True	NA	NA	NA	72686182	72738087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_72686252_72695176_72695229_72709699_72709780_72712243_72712308_72715290_72715403_72716777_72716851_72722793_72722848_72724527_72724656_72727939_72727995_72731304_72731458_72731554_72731727_72735112_72735183_72735824_72735967_72736761_72736964_72737477
transcript_66291.known	chr15	+	2055	15	FSM	ENSG00000140463.14	ENST00000566400.5	2055	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	140.629633710506	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTTAAAAGAAAAAAAACAA	72682374	True	NA	3	True	NA	NA	NA	72686185	72738087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_72686252_72709699_72709780_72712243_72712308_72715290_72715403_72716777_72716851_72722788_72722848_72724527_72724656_72727939_72727995_72729615_72729685_72731304_72731458_72731554_72731727_72735112_72735183_72735824_72735967_72736761_72736964_72737477
transcript_66320.nic	chr15	-	2762	7	NIC	ENSG00000159322.18	novel	2716	7	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_6	88.1828907567802	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGTCTGTAATTGATT	-72780222	True	NA	-2	True	ATTAAA	-19	NA	72783774	72751368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_72752896_72755555_72755655_72756250_72756448_72760406_72760528_72771782_72771846_72774871_72775098_72783245
transcript_66321.known	chr15	-	2608	7	FSM	ENSG00000159322.18	ENST00000456471.3	2608	7	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	58.6988548061677	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGATGTGCATGTTACT	-72780206	True	NA	73	True	GATAAA	-18	NA	72783758	72751293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72752896_72755555_72755655_72756250_72756448_72760406_72760528_72771782_72771846_72774871_72775098_72783458
transcript_66326.known	chr15	-	2716	7	FSM	ENSG00000159322.18	ENST00000567941.5	2716	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_6	85.9088664419065	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGTCTGTAATTGATT	-72780179	True	NA	-2	True	ATTAAA	-19	NA	72783731	72751368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72752893_72755555_72755655_72756250_72756448_72760406_72760528_72771782_72771846_72774871_72775098_72783245
transcript_66328.known	chr15	-	2557	7	FSM	ENSG00000159322.18	ENST00000311669.12	2557	7	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	53.8547429047186	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGTCTGTAATTGATT	NA	False	NA	-2	True	ATTAAA	-19	NA	72783785	72751368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72752893_72755555_72755655_72756250_72756448_72760406_72760528_72771782_72771846_72774871_72775098_72783458
transcript_6633.nic	chr1	+	817	6	ISM	ENSG00000197056.11	ENST00000488455.5	3055	11	-36	10233	-32	6809	5prime_fragment	FALSE	canonical	2	12	junction_1	47.8648096204299	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTGTTACCATATGTAC	35074272	True	NA	NA	False	AAAAAG	-5	NA	35079349	35104403	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_35079443_35093319_35093442_35093913_35094084_35095818_35095892_35097316_35097567_35104294
transcript_6634.nic	chr1	+	697	5	ISM	ENSG00000197056.11	ENST00000359858.9	4161	10	-37	11456	-34	6809	5prime_fragment	FALSE	canonical	3	66	junction_1	26.8642420328585	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTGTTACCATATGTAC	NA	False	NA	NA	False	AAAAAG	-5	NA	35079347	35104403	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_35079443_35093913_35094084_35095818_35095892_35097316_35097567_35104294
transcript_66346.nic	chr15	-	2360	6	NIC	ENSG00000159322.18	novel	2557	7	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_2	87.3260556764131	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAATTCTGTCTGTAATTG	NA	False	NA	-5	True	ATTAAA	-16	NA	72783788	72751371	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_72752893_72755555_72755655_72760406_72760528_72771782_72771846_72774871_72775098_72783458
transcript_66347.known	chr15	-	2262	5	FSM	ENSG00000159322.18	ENST00000569534.5	2262	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	91.3153875313465	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGTCTGTAATTGATT	-72780224	True	NA	-2	True	ATTAAA	-19	NA	72783776	72751368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72752896_72755555_72755655_72756250_72756448_72760406_72760528_72783458
transcript_66352.known	chr15	-	1041	5	FSM	ENSG00000159322.18	ENST00000563907.5	1041	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	104.464108668959	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTAAAGACCCCATTCGA	-72780071	False	NA	NA	False	NA	NA	NA	72783623	72752429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72752896_72760406_72760528_72771782_72771846_72774871_72775098_72783458
transcript_66361.known	chr15	-	951	4	FSM	ENSG00000159322.18	ENST00000569517.5	951	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	35.9382185918495	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCCGTGGCTGCAGGAGC	-72780163	True	NA	NA	False	NA	NA	NA	72783715	72752634	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72752896_72755555_72755655_72760406_72760528_72783245
transcript_66374.known	chr15	-	556	3	FSM	ENSG00000159322.18	ENST00000562286.1	556	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	111	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATCAAGCAGGTAAGGAAA	-72780076	True	NA	NA	False	NA	NA	NA	72783628	72760417	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_72760528_72771782_72771846_72783245
transcript_66394.nnic	chr15	+	3602	11	NNC	ENSG00000103855.18	novel	3295	10	NA	NA	-84	0	intron_retention	TRUE	canonical	2	10	junction_1	341.987207363083	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTCTCTGTGAAGTGT	73684151	False	NA	16	True	AATAAA	-15	NA	73684184	73714514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_+_73684461_73697593_73697703_73699585_73699719_73702254_73702594_73702771_73703087_73703658_73703998_73704175_73704473_73708338_73708474_73709647_73709690_73711134_73711171_73712933
transcript_66397.known	chr15	+	3295	10	FSM	ENSG00000103855.18	ENST00000318443.10	3295	10	0	0	0	0	multi-exon	FALSE	canonical	3	582	junction_1	140.856901381035	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTCTCTGTGAAGTGT	73680244	True	NA	16	True	AATAAA	-15	NA	73684382	73714514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_73684461_73699585_73699719_73702254_73702594_73702771_73703087_73703658_73703998_73704175_73704473_73708338_73708474_73709647_73709690_73711134_73711171_73712933
transcript_66399.known	chr15	+	2181	10	FSM	ENSG00000103855.18	ENST00000560928.5	2181	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	284.662286374487	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAGTGAAGACAGGGCAC	73683991	True	NA	NA	False	NA	NA	NA	73684437	73713580	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_73684461_73699585_73699719_73702379_73702594_73702771_73703087_73703658_73703998_73704175_73704473_73708338_73708474_73709647_73709690_73711134_73711171_73712933
transcript_66404.known	chr15	+	2690	9	FSM	ENSG00000103855.18	ENST00000561213.5	2690	9	0	0	0	0	multi-exon	FALSE	canonical	3	582	junction_1	149.275699211225	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	73680252	True	NA	NA	False	NA	NA	NA	73684390	73712154	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_73684461_73699585_73699719_73702254_73702594_73702771_73703087_73703658_73703998_73704175_73704473_73708338_73708474_73709647_73709690_73711134
transcript_66408.known	chr15	+	2439	9	FSM	ENSG00000103855.18	ENST00000537340.6	2439	9	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	289.776611159355	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCCTCCTCTGCAGTGC	73684092	False	NA	NA	False	NA	NA	NA	73684268	73713677	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_73684461_73702254_73702594_73702771_73703087_73703658_73703998_73704175_73704473_73708338_73708474_73709647_73709690_73711134_73711171_73712933
transcript_66412.known	chr15	+	2738	8	FSM	ENSG00000103855.18	ENST00000318424.9	2738	8	0	0	0	0	multi-exon	FALSE	canonical	3	582	junction_1	62.1791355517201	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGCTTTTTCTCTGTGA	73684214	False	NA	11	True	AATAAA	-10	NA	73684280	73714509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_73684461_73699585_73699719_73702254_73702594_73704175_73704473_73708338_73708474_73709647_73709690_73711134_73711171_73712933
transcript_66416.known	chr15	+	1224	2	FSM	ENSG00000260469.3	ENST00000615095.1	1224	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGGTGTTTTATTGCTAA	73752157	True	NA	NA	False	ACTAAA	-16	NA	73752316	73770613	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_73752397_73769469
transcript_66419.known	chr15	+	2346	7	FSM	ENSG00000129038.16	ENST00000261921.8	2346	7	0	0	0	0	multi-exon	TRUE	canonical	3	54	junction_1	8.34665601703261	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGGCTCTGCATGCGG	73925640	True	NA	6	True	AATAAA	-15	NA	73926461	73952136	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_73927886_73942853_73942963_73946416_73946555_73947066_73947224_73947806_73947903_73949458_73949575_73951830
transcript_66428.nic	chr15	-	736	3	FSM	ENSG00000261801.7	ENST00000688623.1	701	3	-35	0	-27	0	multi-exon	FALSE	canonical	3	20	junction_1	27.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGTTTTGGGGTAATTTG	-73926846	True	NA	-1	True	AATAAA	-18	NA	73928001	73916137	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_73916448_73919837_73920039_73927776
transcript_66429.known	chr15	-	588	3	FSM	ENSG00000261801.7	ENST00000565416.1	588	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	26.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCACCTGGATCAAGAAATA	-73926785	True	NA	NA	False	NA	NA	NA	73927940	73919160	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_73919384_73919837_73920039_73927776
transcript_66430.known	chr15	-	885	3	FSM	ENSG00000261801.7	ENST00000565756.5	885	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	35	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTGCATACAAGCACTCA	-73926804	True	NA	NA	False	TTTAAA	-34	NA	73927959	73918760	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_73919384_73919959_73920039_73927776
transcript_66433.known	chr15	-	1183	2	FSM	ENSG00000261801.7	ENST00000562965.1	1183	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGACTGACTTATGTGG	-73926805	True	NA	NA	False	NA	NA	NA	73927960	73919039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_73920039_73927776
transcript_66437.nic	chr15	-	2027	7	NIC	ENSG00000067221.14	novel	2169	8	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	7.67390962214756	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAGAAGAAGCCAAGCG	-73992106	True	NA	NA	False	AATAAA	-20	NA	73992337	73983217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_73984131_73984658_73984869_73985317_73985514_73988598_73988803_73989107_73989258_73990350_73990458_73992090
transcript_66438.known	chr15	-	6280	7	FSM	ENSG00000067221.14	ENST00000541638.6	6280	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	5.19615242270663	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAGTCTTTGTTTGGACA	-73992064	True	NA	NA	False	AATAAA	-20	NA	73992295	73978925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_73984131_73984658_73984872_73985317_73985514_73988598_73988803_73989107_73989258_73990350_73990458_73992090
transcript_66440.known	chr15	-	1849	6	FSM	ENSG00000067221.14	ENST00000564777.5	1849	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	9.35948716543807	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAAGCGGGGCTCCTGGGG	-73992066	True	NA	NA	False	AATAAA	-32	NA	73992297	73983205	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_73984131_73984658_73984869_73985317_73985514_73988598_73988803_73990350_73990458_73992090
transcript_66442.known	chr15	-	1891	6	FSM	ENSG00000067221.14	ENST00000316911.10	1891	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	7.19444229944198	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAGAAGAAGCCAAGCG	-73992281	False	NA	NA	False	AATAAA	-20	NA	73992348	73983217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_73984131_73984658_73984872_73985317_73985514_73988598_73988803_73990350_73990458_73992090
transcript_66445.known	chr15	-	1833	7	FSM	ENSG00000067221.14	ENST00000561656.5	1833	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	9.94428926011753	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGTGTTTACAATGTATA	NA	False	NA	NA	False	AATAAA	-1	NA	73994622	73983236	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_73984131_73984658_73984869_73985317_73985514_73988598_73988803_73989107_73989258_73990350_73990458_73994550
transcript_66446.known	chr15	-	2169	8	FSM	ENSG00000067221.14	ENST00000316900.9	2169	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	11.3497280377378	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAGAAGAAGCCAAGCG	-73992281	False	NA	NA	False	AATAAA	-20	NA	73992348	73983217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_73984131_73984658_73984869_73985317_73985514_73988598_73988803_73989107_73989258_73990350_73990458_73990814_73990946_73992090
transcript_66447.known	chr15	+	5565	9	FSM	ENSG00000140464.20	ENST00000268058.8	5565	9	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_8	37.3329613076702	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGCTTGTCTTCAGGGT	73992584	True	NA	NA	False	AATAAA	-33	NA	73994715	74047827	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74032571_74032716_74033155_74033415_74034477_74034531_74042988_74043140_74044220
transcript_66448.known	chr15	+	2251	8	FSM	ENSG00000140464.20	ENST00000569477.5	2251	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	48.4115014163758	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCCTGCCCAGCTGCAAA	73992599	True	NA	NA	False	NA	NA	NA	73994730	74035590	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74032571_74032716_74033155_74033415_74034477_74034531_74035131
transcript_66449.known	chr15	+	3010	8	FSM	ENSG00000140464.20	ENST00000436891.7	3010	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	48.0917490483618	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGCGAACCCTTATTCC	73992612	True	NA	26	True	AATAAA	-18	NA	73994743	74036394	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74032571_74032716_74033155_74033423_74034477_74034531_74035171
transcript_66450.known	chr15	+	2148	8	FSM	ENSG00000140464.20	ENST00000569965.5	2148	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	44.757851893522	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGCCTGAGTGTGCGA	73992601	True	NA	4	True	AATAAA	-14	NA	73994732	74043338	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74032571_74032716_74033155_74033423_74034477_74034531_74042988
transcript_66451.known	chr15	+	5393	8	FSM	ENSG00000140464.20	ENST00000565898.5	5393	8	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_7	43.2765195326189	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACAAAAAAACATGG	73992597	True	NA	NA	False	AATAAA	-18	NA	73994728	74047812	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74033155_74033415_74034477_74034531_74042988_74043140_74044220
transcript_66453.known	chr15	+	3643	7	FSM	ENSG00000140464.20	ENST00000435786.6	3643	7	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_4	24.6576560118759	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGCGAACCCTTATTCC	73992612	True	NA	26	True	AATAAA	-18	NA	73994743	74036394	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74032571_74032716_74033155_74033415_74034477
transcript_66454.nic	chr15	+	2955	7	NIC	ENSG00000140464.20	novel	2199	8	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	7	junction_6	54.6455751995428	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCCTTGCGAACCCTTAT	73992541	True	NA	23	True	AATAAA	-15	NA	73994672	74036391	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74033155_74033415_74034477_74034531_74035142
transcript_66455.known	chr15	+	2885	7	FSM	ENSG00000140464.20	ENST00000354026.10	2885	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_6	42.3179105764398	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGCGAACCCTTATTCC	73992585	True	NA	26	True	AATAAA	-18	NA	73994716	74036394	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74033155_74033415_74034477_74034531_74035171
transcript_66456.known	chr15	+	1985	7	FSM	ENSG00000140464.20	ENST00000564428.5	1985	7	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	35.485912697858	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGCCTGAGTGTGCGA	73992612	True	NA	4	True	AATAAA	-14	NA	73994743	74043338	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74033155_74033415_74034477_74034531_74042988
transcript_66457.nic	chr15	+	3570	6	ISM	ENSG00000140464.20	ENST00000354026.10	2885	7	-44	0	0	0	intron_retention	FALSE	canonical	3	60	junction_4	34.5160832076874	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGCGAACCCTTATTCC	73992541	True	NA	26	True	AATAAA	-18	NA	73994672	74036394	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74033155_74033415_74034477
transcript_66460.known	chr15	+	1726	6	FSM	ENSG00000140464.20	ENST00000359928.8	1726	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	56.0406994959913	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGCCTGAGTGTGCGA	73992612	True	NA	4	True	AATAAA	-14	NA	73994743	74043338	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74034477_74034531_74042988
transcript_66464.known	chr15	+	2824	4	FSM	ENSG00000167178.17	ENST00000565159.5	2824	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.74165738677394	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTCCCCAACCTTCACCT	74129620	True	NA	NA	False	NA	NA	NA	74129658	74135077	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74129974_74130553_74130622_74131206_74131317_74132746
transcript_66465.known	chr15	+	4259	4	FSM	ENSG00000167178.17	ENST00000435464.5	4259	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.74165738677394	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGCTCGGTGACTTTT	74130203	True	NA	9	True	AATAAA	-13	NA	74130248	74136800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74130276_74130553_74130622_74131206_74131317_74132746
transcript_66466.known	chr15	+	4202	3	FSM	ENSG00000167178.17	ENST00000453268.3	4202	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	3	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTCGGTGACTTTTTG	74130472	True	NA	11	True	AATAAA	-15	NA	74130585	74136802	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74130622_74131206_74131317_74132746
transcript_66467.known	chr15	-	2139	3	FSM	ENSG00000248540.3	ENST00000668929.1	2139	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGACTCTGTCTCAAAAAAA	-74129134	False	NA	NA	False	NA	NA	NA	74129146	74126385	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74127734_74128015_74128625_74128964
transcript_66468.known	chr15	-	1260	2	FSM	ENSG00000248540.3	ENST00000659491.1	1260	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTAGGGCCCAAGCCTG	-74129329	False	NA	NA	False	NA	NA	NA	74129341	74127741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74128625_74128964
transcript_66470.known	chr15	-	2924	1	FSM	ENSG00000248540.3	ENST00000563727.1	2924	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTGGACTTTGTGAC	-74128826	False	NA	-6	True	ATTAAA	-18	NA	74128838	74125914	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74125900_74128800
transcript_66471.known	chr15	+	4817	4	FSM	ENSG00000167178.17	ENST00000361742.7	4817	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.74165738677394	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTCGGTGACTTTTTG	74129343	False	NA	11	True	AATAAA	-15	NA	74129373	74136802	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74129957_74130553_74130622_74131206_74131317_74132746
transcript_66472.known	chr15	+	2175	2	FSM	ENSG00000129009.13	ENST00000395118.1	2175	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTGTCTGCCTGGAATT	NA	False	NA	4	True	AATAAA	-18	NA	74174500	74176872	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74174654_74174850
transcript_66489.known	chr15	-	2565	19	FSM	ENSG00000137868.19	ENST00000563965.5	2565	19	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_18	24.7863089448815	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCAGGTCCTCCGGATCA	-74202846	False	NA	NA	False	NA	NA	NA	74202858	74179974	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74180244_74180781_74180938_74181294_74181459_74182160_74182263_74182342_74182461_74183855_74183990_74184979_74185056_74189114_74189278_74190839_74190902_74191166_74191244_74191423_74191492_74193799_74193923_74195301_74195469_74195651_74195676_74196007_74196148_74197337_74197424_74197751_74197819_74202154_74202283_74202417
transcript_66490.known	chr15	-	2708	19	FSM	ENSG00000137868.19	ENST00000395105.9	2708	19	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	15.6115065193103	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCCTCATAGCGGGAGGG	-74201877	True	NA	-5	True	AATAAA	-16	NA	74202787	74179465	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74180244_74180781_74180938_74181294_74181459_74182160_74182263_74182342_74182461_74183855_74183990_74184979_74185056_74189114_74189278_74190839_74190902_74191166_74191244_74191423_74191492_74193799_74193923_74195301_74195469_74195651_74195676_74196007_74196148_74197337_74197424_74197751_74197819_74202154_74202283_74202712
transcript_66492.known	chr15	-	2864	19	FSM	ENSG00000137868.19	ENST00000323940.9	2864	19	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_18	24.2441287279576	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCCTCATAGCGGGAGGG	-74208838	True	NA	-5	True	AATAAA	-16	NA	74209030	74179465	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74180244_74180781_74180938_74181294_74181459_74182160_74182263_74182342_74182461_74183855_74183990_74184979_74185056_74189114_74189278_74190839_74190902_74191166_74191244_74191423_74191492_74193799_74193923_74195301_74195469_74195651_74195676_74196007_74196148_74197337_74197424_74197751_74197819_74202154_74202283_74208799
transcript_66493.known	chr15	-	2631	19	FSM	ENSG00000137868.19	ENST00000535552.5	2631	19	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_18	26.0779931818969	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCAGCCACATCCAGGCGT	-74209675	True	NA	NA	False	AAGAAA	-41	NA	74209705	74179814	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74180244_74180781_74180938_74181294_74181459_74182160_74182263_74182342_74182461_74183855_74183990_74184979_74185056_74189114_74189278_74190839_74190902_74191166_74191244_74191423_74191492_74193799_74193923_74195301_74195469_74195651_74195676_74196007_74196148_74197337_74197424_74197751_74197819_74202154_74202283_74209358
transcript_66494.known	chr15	-	2732	19	FSM	ENSG00000137868.19	ENST00000449139.6	2732	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	26.6419445588445	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCCTCATAGCGGGAGGG	-74212213	False	NA	-5	True	AATAAA	-16	NA	74212225	74179465	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74180244_74180781_74180938_74181294_74181459_74182160_74182263_74182342_74182461_74183855_74183990_74184979_74185056_74189114_74189278_74190839_74190902_74191166_74191244_74191423_74191492_74193799_74193923_74195301_74195469_74195651_74195676_74196007_74196148_74197337_74197424_74197751_74197819_74202154_74202283_74212126
transcript_66531.known	chr15	-	612	2	FSM	ENSG00000277749.1	ENST00000611006.1	612	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTGTTAAACTGCATGT	-74319612	True	NA	-16	True	AATAAA	-15	NA	74319688	74311515	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74311959_74319519
transcript_66533.known	chr15	-	2001	9	FSM	ENSG00000140459.18	ENST00000358632.8	2001	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	6.48074069840786	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGCGTTCCATCAGAC	-74366193	False	NA	-12	True	AATAAA	-17	NA	74366206	74337758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74338104_74338570_74338769_74339236_74339316_74339586_74339754_74342976_74343138_74343788_74343993_74345043_74345244_74347899_74348056_74365715
transcript_66535.known	chr15	+	915	4	FSM	ENSG00000260266.1	ENST00000564109.1	915	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	1.24721912892465	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGAGTGGTGGATGGCAA	74350653	True	NA	NA	False	AATACA	-33	NA	74350767	74361903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74350940_74354525_74354686_74356282_74356476_74361513
transcript_66538.known	chr15	-	3376	14	FSM	ENSG00000138623.10	ENST00000261918.9	3376	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.64262742338943	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCGCCTGTTCCTTGCCT	-74432359	True	NA	-5	True	AATAAA	-16	NA	74433958	74409288	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74410986_74411294_74411357_74411555_74411711_74411884_74412013_74414546_74414746_74414837_74414947_74415800_74415986_74416574_74416715_74417334_74417446_74417590_74417676_74417876_74417970_74418267_74418310_74418800_74418953_74433740
transcript_66542.known	chr15	-	2304	13	FSM	ENSG00000138623.10	ENST00000543145.6	2304	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.80277563773199	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGCCCAAGAGCCCATGG	-74432356	True	NA	NA	False	ACTAAA	-13	NA	74433955	74410315	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74410986_74411294_74411357_74411555_74411711_74411884_74412013_74414546_74414746_74414837_74414947_74415800_74415986_74416574_74416715_74417334_74417446_74417590_74417676_74417876_74417970_74418800_74418953_74433740
transcript_66544.nnic	chr15	-	1630	12	NNC	ENSG00000138629.16	novel	1477	12	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_11	228.578141873078	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTGTCCAGTTCTTGA	-74453757	True	NA	-3	True	AATATA	-18	NA	74461122	74445976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_-_74446228_74448477_74448601_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74460667_74460779_74460888
transcript_66545.known	chr15	-	1477	12	FSM	ENSG00000138629.16	ENST00000564488.5	1477	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_11	226.742654577736	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTTTGTCCAGTTCTTG	-74453753	True	NA	-4	True	AATATA	-17	NA	74461118	74445977	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74446228_74448477_74448601_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74460667_74460779_74461036
transcript_66551.known	chr15	-	1720	11	FSM	ENSG00000138629.16	ENST00000567435.5	1720	11	0	0	0	0	multi-exon	TRUE	canonical	3	73	junction_10	168.281341805917	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTGTCCAGTTCTTGA	-74453737	True	NA	-3	True	AATATA	-18	NA	74461102	74445976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74446228_74448477_74448601_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74460667
transcript_66552.known	chr15	-	1409	11	FSM	ENSG00000138629.16	ENST00000395081.7	1409	11	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_10	114.592495391278	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTGTCCAGTTCTTGA	-74453795	True	NA	-3	True	AATATA	-18	NA	74461160	74445976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74446228_74448477_74448601_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74461036
transcript_66553.known	chr15	-	1360	11	FSM	ENSG00000138629.16	ENST00000361351.8	1360	11	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_10	114.882766331596	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTGTCCAGTTCTTGA	-74453817	True	NA	-3	True	AATATA	-18	NA	74461182	74445976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74446228_74448477_74448601_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74461107
transcript_66554.nnic	chr15	-	1434	11	NNC	ENSG00000138629.16	novel	1360	11	NA	NA	-124	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_10	177.745576597563	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTGTCCAGTTCTTGA	NA	False	NA	-3	True	AATATA	-18	NA	74461306	74445976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_-_74446228_74448477_74448601_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74461157
transcript_6656.known	chr1	-	3740	10	FSM	ENSG00000116560.11	ENST00000357214.6	3740	10	0	0	0	0	multi-exon	FALSE	canonical	3	1936	junction_9	195.766868153594	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGTGTTGTCAGTTAA	-35104552	True	NA	-14	True	CATAAA	-14	NA	35193145	35182935	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_35184594_35187000_35187123_35187202_35187252_35187972_35188091_35189002_35189088_35189185_35189383_35190497_35190594_35190693_35190996_35191340_35191530_35192221
transcript_66560.nnic	chr15	-	1305	10	NIC	ENSG00000138629.16	novel	1409	11	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	62	junction_1	202.633281850688	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTGTCCAGTTCTTGA	-74453814	True	NA	-3	True	AATATA	-18	NA	74461179	74445976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_74446228_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74461036
transcript_66561.nnic	chr15	-	1245	10	NIC	ENSG00000138629.16	novel	1360	11	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	62	junction_1	202.780730572108	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTGTCCAGTTCTTGA	-74453825	True	NA	-3	True	AATATA	-18	NA	74461190	74445976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_74446228_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74461107
transcript_66569.known	chr15	+	1333	4	FSM	ENSG00000247240.9	ENST00000499217.6	1333	4	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	19.258475767539	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTCATTTTCATCCATTC	74459819	True	NA	23	True	AATAAA	-32	NA	74461264	74481302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74462032_74466035_74466131_74479059_74479279_74481050
transcript_66570.known	chr15	+	1344	4	FSM	ENSG00000247240.9	ENST00000666989.2	1391	4	42	5	0	0	multi-exon	FALSE	canonical	3	44	junction_3	9.20144916122817	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTTCCCTGTCATGGTC	74459861	True	NA	9	True	AATAAA	-18	NA	74461306	74481288	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74462099_74466035_74466131_74479059_74479279_74481050
transcript_66571.known	chr15	+	1296	4	FSM	ENSG00000247240.9	ENST00000657781.2	1347	4	31	20	14	-5	multi-exon	FALSE	canonical	3	17	junction_1	19.258475767539	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACATGTTTCCCTGTCA	74459833	True	NA	4	True	AATAAA	-13	NA	74461278	74481283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74462028_74466035_74466131_74479059_74479279_74481050
transcript_66573.known	chr15	+	1251	3	FSM	ENSG00000247240.9	ENST00000659591.2	1300	3	45	4	0	-1	multi-exon	FALSE	canonical	3	13	junction_1	15.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCCCTGTCATGGTCAT	74459861	True	NA	11	True	AATAAA	-20	NA	74461306	74481290	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74462099_74479059_74479279_74481050
transcript_66574.known	chr15	-	3385	2	FSM	ENSG00000260103.2	ENST00000563287.1	3385	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAAAATATAA	-74490234	True	NA	NA	False	AATAAA	-15	NA	74490286	74478069	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74481404_74490235
transcript_66591.known	chr15	+	4228	9	FSM	ENSG00000179361.18	ENST00000346246.10	4228	9	0	0	0	0	multi-exon	FALSE	canonical	3	917	junction_7	94.8429623113913	1626	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGTCTCTCTCAGTTGCT	74525248	True	NA	31	True	AATAAA	-20	NA	74541219	74598131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74541331_74543859_74544489_74572861_74572934_74573131_74573205_74589819_74590004_74591150_74591435_74591559_74591815_74593137_74593237_74595610
transcript_66633.known	chr15	+	1854	13	FSM	ENSG00000179335.20	ENST00000395066.9	1854	13	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	38.2784933814741	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTGGAGAGCTAAGTGT	74611610	True	NA	19	True	AATAAA	-19	NA	74615835	74630201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74615899_74619196_74619349_74620008_74620226_74622119_74622217_74622493_74622561_74624901_74625019_74625801_74625969_74627351_74627447_74627538_74627669_74627969_74628053_74628603_74628684_74628941_74629033_74629706
transcript_66635.nic	chr15	+	1769	13	NIC	ENSG00000179335.20	novel	1854	13	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	75.3008779644847	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCTGGTACCAGTGTGT	74611661	True	NA	15	True	AATAAA	-19	NA	74615886	74630116	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_74615950_74619196_74619349_74620008_74620226_74622119_74622217_74622493_74622561_74624901_74625019_74625801_74625969_74627351_74627447_74627538_74627669_74627969_74628053_74628603_74628684_74628941_74629033_74629706
transcript_66637.nic	chr15	+	2445	12	ISM	ENSG00000179335.20	ENST00000395066.9	1854	13	0	83	0	0	intron_retention	FALSE	canonical	3	200	junction_1	37.793261019822	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGGTACCAGTGTGTCC	74611610	True	NA	17	True	AATAAA	-21	NA	74615835	74630118	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_74615899_74619196_74619349_74620008_74620226_74622119_74622217_74622493_74622561_74624901_74625019_74625801_74625969_74627351_74627447_74627538_74627669_74627969_74628053_74628603_74628684_74628941
transcript_66638.nic	chr15	+	2516	12	ISM	ENSG00000179335.20	ENST00000395066.9	1854	13	9	3	1	-2	intron_retention	FALSE	canonical	3	200	junction_1	37.793261019822	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCTTGTGGAGAGCTAAG	74611619	True	NA	16	True	AATAAA	-16	NA	74615844	74630198	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_74615899_74619196_74619349_74620008_74620226_74622119_74622217_74622493_74622561_74624901_74625019_74625801_74625969_74627351_74627447_74627538_74627669_74627969_74628053_74628603_74628684_74628941
transcript_66639.nic	chr15	+	1672	12	NIC	ENSG00000179335.20	novel	1854	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_3	73.1641424164679	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCTGGTACCAGTGTGT	74611610	True	NA	15	True	AATAAA	-19	NA	74615835	74630116	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_74615899_74619196_74619349_74620008_74620226_74622493_74622561_74624901_74625019_74625801_74625969_74627351_74627447_74627538_74627669_74627969_74628053_74628603_74628684_74628941_74629033_74629706
transcript_66640.nic	chr15	+	1759	12	NIC	ENSG00000179335.20	novel	3787	12	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_3	73.1641424164679	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTGTGGAGAGCTAAGTG	74611607	True	NA	18	True	AATAAA	-18	NA	74615832	74630200	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_74615899_74619196_74619349_74620008_74620226_74622493_74622561_74624901_74625019_74625801_74625969_74627351_74627447_74627538_74627669_74627969_74628053_74628603_74628684_74628941_74629033_74629706
transcript_66641.known	chr15	+	3787	12	FSM	ENSG00000179335.20	ENST00000454830.6	3787	12	0	0	0	0	multi-exon	TRUE	canonical	3	200	junction_1	36.9589900044463	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTGTGGAGAGCTAAGTG	74611570	True	NA	18	True	AATAAA	-18	NA	74615795	74630200	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74615899_74619196_74619349_74620008_74622217_74622493_74622561_74624901_74625019_74625801_74625969_74627351_74627447_74627538_74627669_74627969_74628053_74628603_74628684_74628941_74629033_74629706
transcript_66646.nic	chr15	+	2348	11	NIC	ENSG00000179335.20	novel	1854	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	47	junction_3	76.1675127597062	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGGTACCAGTGTGTCC	74611610	True	NA	17	True	AATAAA	-21	NA	74615835	74630118	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_74615899_74619196_74619349_74620008_74620226_74622493_74622561_74624901_74625019_74625801_74625969_74627351_74627447_74627538_74627669_74627969_74628053_74628603_74628684_74628941
transcript_66657.known	chr15	-	3810	9	FSM	ENSG00000179151.13	ENST00000647659.1	3810	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	134.591743803251	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAATGACTGACTGAGTC	-74689080	True	NA	-18	True	AATAAA	-1	NA	74695936	74630574	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74632947_74635408_74635627_74640465_74640620_74655732_74656069_74671454_74671775_74674960_74675143_74676940_74677023_74687090_74687180_74695879
transcript_66661.known	chr15	-	1825	8	FSM	ENSG00000179151.13	ENST00000568176.5	1825	8	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_6	119.282378054286	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCATGGACCTTGTTAAA	-74689144	True	NA	-39	True	NA	NA	NA	74696000	74632541	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74632947_74635408_74635627_74640465_74640620_74655732_74656069_74671454_74671775_74674960_74675143_74687090_74687180_74695879
transcript_66666.known	chr15	-	3744	7	FSM	ENSG00000179151.13	ENST00000315127.9	3744	7	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_6	47.2605073560955	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTGCCGTGTGACTTG	-74689168	True	NA	-1	True	AATAAA	-18	NA	74696024	74630557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74632947_74635408_74635627_74640465_74640620_74655732_74656069_74671454_74671775_74674960_74675143_74695879
transcript_66677.nic	chr15	-	3301	5	ISM	ENSG00000179151.13	ENST00000315127.9	3744	7	-25	7769	-20	2234	5prime_fragment	FALSE	canonical	3	215	junction_4	47.1646053730973	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCTGAAGTTCAGAAAAGG	-74689193	True	NA	NA	False	NA	NA	NA	74696049	74638326	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_74640620_74655732_74656069_74671454_74671775_74674960_74675143_74695879
transcript_66680.known	chr15	+	958	1	FSM	ENSG00000179335.20	ENST00000568232.1	958	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGGTACCAGTGTGTCC	74629145	False	NA	17	True	AATAAA	-21	NA	74629160	74630118	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74629200_74630100
transcript_66681.known	chr15	-	2608	7	FSM	ENSG00000140465.15	ENST00000395048.6	2608	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTGGAGATTTTTTGAAT	NA	False	NA	NA	False	AATAAA	-21	NA	74725536	74719541	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74720775_74720966_74721054_74721198_74721323_74721413_74721504_74721590_74721718_74722272_74723124_74725440
transcript_66687.known	chr15	+	1900	14	FSM	ENSG00000103653.17	ENST00000439220.6	1900	14	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	33.635005715288	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGGGCATTTTACAAGAA	74777590	True	NA	-12	True	AAGAAA	-10	NA	74782088	74802882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74782149_74782667_74782721_74798232_74798313_74798614_74798729_74798825_74798939_74799271_74799492_74800411_74800506_74800680_74800747_74800822_74800923_74801011_74801103_74801521_74801596_74801694_74801891_74801996_74802084_74802330
transcript_66691.known	chr15	+	2743	13	FSM	ENSG00000103653.17	ENST00000220003.14	2743	13	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_3	14.7843291660085	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCTTGTCCTGCCCGGT	74777581	True	NA	46	True	NA	NA	NA	74782079	74803197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74782721_74798232_74798313_74798614_74798729_74798825_74798939_74799271_74799492_74800411_74800506_74800680_74800747_74800822_74800923_74801011_74801103_74801521_74801596_74801694_74801891_74801996_74802084_74802330
transcript_66697.known	chr15	+	2002	3	FSM	ENSG00000213578.6	ENST00000395018.6	2002	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAGCCCAGATCTCATC	74826604	True	NA	NA	False	AATAAA	-24	NA	74826626	74831802	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74826868_74828033_74828122_74830129
transcript_66702.known	chr15	-	2674	17	FSM	ENSG00000140474.14	ENST00000647587.1	2674	17	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_15	70.2138474590305	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTATTTTCTCTATTTGCG	-74840894	True	NA	-17	True	NA	NA	NA	74843124	74836131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74837245_74837368_74837436_74837750_74837799_74838151_74838193_74838265_74838345_74838439_74838505_74838642_74838746_74839009_74839051_74839267_74839374_74839557_74839714_74840233_74840317_74840497_74840642_74841404_74841510_74842074_74842196_74842279_74842421_74842534_74842675_74843003
transcript_66705.known	chr15	-	1633	16	FSM	ENSG00000140474.14	ENST00000566631.5	1633	16	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_14	58.4155991343256	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTACTCGGTGGTTACTG	-74840911	True	NA	NA	False	NA	NA	NA	74843141	74836972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74837245_74837368_74837436_74837750_74837799_74838151_74838193_74838265_74838345_74838439_74838505_74838642_74838746_74839009_74839051_74839267_74839374_74839557_74839714_74840233_74840317_74840497_74840642_74841404_74841510_74842074_74842119_74842279_74842421_74843003
transcript_66707.known	chr15	-	1470	16	FSM	ENSG00000140474.14	ENST00000568667.5	1470	16	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_15	58.9450214653923	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACAGATGTGAGCCATCT	-74842666	False	2230	NA	False	NA	NA	NA	74842676	74837212	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74837245_74837368_74837436_74837750_74837799_74838151_74838193_74838265_74838345_74838439_74838505_74838642_74838746_74839009_74839051_74839267_74839374_74839557_74839714_74840233_74840317_74840497_74840642_74841404_74841510_74842074_74842196_74842279_74842421_74842538
transcript_66710.known	chr15	-	2580	16	FSM	ENSG00000140474.14	ENST00000440863.7	2580	16	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_11	31.4851640547664	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCGCGTCTCTTCTTGCC	-74840926	True	NA	-3	True	ATTAAA	-13	NA	74843156	74836117	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74837245_74837368_74837436_74837750_74837799_74838151_74838193_74838265_74838345_74838439_74838505_74838642_74838746_74839009_74839051_74839267_74839374_74839557_74839714_74840233_74840317_74840497_74840642_74841404_74841510_74842074_74842196_74842279_74842421_74843003
transcript_66712.nic	chr15	-	2895	16	NIC	ENSG00000140474.14	novel	2674	17	NA	NA	6	0	intron_retention	FALSE	canonical	3	26	junction_14	69.7893974755478	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCGCGTCTCTTCTTGCC	-74840920	True	NA	-3	True	ATTAAA	-13	NA	74843150	74836117	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_74837245_74837368_74837436_74837750_74837799_74838151_74838193_74838265_74838345_74838439_74838505_74838642_74838746_74839009_74839051_74839267_74839374_74839557_74839714_74840233_74840642_74841404_74841510_74842074_74842196_74842279_74842421_74842534_74842675_74843003
transcript_66722.known	chr15	-	2951	15	FSM	ENSG00000140474.14	ENST00000570276.5	2951	15	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_4	18.7067869381949	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCGCGTCTCTTCTTGCC	-74843336	False	NA	-3	True	ATTAAA	-13	NA	74843346	74836117	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74837245_74837368_74837436_74837750_74837799_74838151_74838193_74838265_74838345_74838439_74838505_74838642_74838746_74839009_74839051_74839267_74839374_74839557_74839714_74840233_74840642_74841404_74841510_74842074_74842196_74842279_74842421_74843003
transcript_66733.nic	chr15	-	2936	14	NIC	ENSG00000140474.14	novel	2951	15	NA	NA	-6	0	intron_retention	FALSE	canonical	3	189	junction_4	19.4126780997862	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCGCGTCTCTTCTTGCC	-74840917	True	NA	-3	True	ATTAAA	-13	NA	74843147	74836117	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_74837245_74837368_74837436_74837750_74837799_74838151_74838193_74838265_74838345_74838439_74838505_74838642_74838746_74839009_74839051_74839267_74839714_74840233_74840642_74841404_74841510_74842074_74842196_74842279_74842421_74843003
transcript_66739.known	chr15	-	1565	14	FSM	ENSG00000140474.14	ENST00000565881.5	1565	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	80.4447695424977	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCTGGAGCAGAGGGGCA	-74840894	True	NA	NA	False	NA	NA	NA	74843124	74837198	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74837245_74837368_74837436_74837750_74837799_74838151_74838193_74838439_74838505_74838642_74838746_74839009_74839051_74839267_74839374_74839557_74839714_74840233_74840642_74841404_74841506_74842074_74842196_74842279_74842421_74843003
transcript_66770.known	chr15	-	2611	16	FSM	ENSG00000140474.14	ENST00000569437.5	2611	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	62.3322994566666	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCGCGTCTCTTCTTGCC	-74840963	True	NA	-3	True	ATTAAA	-13	NA	74843193	74836117	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74837245_74837368_74837436_74837756_74837799_74838151_74838193_74838265_74838345_74838439_74838505_74838642_74838746_74839009_74839051_74839267_74839374_74839557_74839714_74840233_74840317_74840497_74840642_74841404_74841510_74842074_74842196_74842279_74842421_74843003
transcript_66773.known	chr15	-	858	9	FSM	ENSG00000140497.16	ENST00000569904.5	858	9	0	0	0	0	multi-exon	FALSE	canonical	2	38	junction_3	146.330479993062	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCGACGGACAGGGGCCAG	-74870908	True	NA	NA	False	NA	NA	NA	74873302	74845205	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74845218_74845472_74845594_74848599_74848646_74850513_74850674_74851352_74851482_74852068_74852187_74854020_74854120_74854580_74854650_74873198
transcript_66775.known	chr15	-	2453	9	FSM	ENSG00000140497.16	ENST00000268099.13	2453	9	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_2	22.2145082097264	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGGTCCACATGTCTGGT	-74870971	True	NA	-5	True	AATAAA	-16	NA	74873365	74843729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74845218_74845472_74845594_74848599_74848702_74850513_74850674_74851352_74851482_74852068_74852187_74854020_74854120_74854580_74854650_74873198
transcript_66785.known	chr15	-	3162	8	FSM	ENSG00000140497.16	ENST00000563829.5	3162	8	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_2	23.4912054755365	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTTTGGTAGGATTCTTT	-74870971	True	NA	-1	True	AAAACA	-24	NA	74873365	74844854	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74845218_74845472_74845594_74848599_74848702_74850513_74850674_74851352_74851482_74852068_74854120_74854580_74854650_74873198
transcript_66794.known	chr15	+	5793	8	FSM	ENSG00000178802.18	ENST00000352410.9	5793	8	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	31.0154668459701	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGCCTCCATTCAACA	74885720	True	NA	3	True	AATAAA	-14	NA	74890041	74902219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74890090_74890526_74890655_74891378_74891580_74892660_74892803_74893137_74893321_74896151_74896326_74897010_74897220_74897511
transcript_66798.nic	chr15	+	1914	8	NIC	ENSG00000178802.18	novel	5793	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	61.2815516401843	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGGGGTAATGAGCACT	74885720	True	NA	15	True	ATTAAA	-17	NA	74890041	74898228	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_74890202_74890526_74890655_74891378_74891580_74892660_74892803_74893137_74893321_74896151_74896326_74897010_74897220_74897511
transcript_66801.known	chr15	+	1707	8	FSM	ENSG00000178802.18	ENST00000563786.5	1707	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	63.7930326948654	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACCCAGCATTAGCTCAG	74885720	True	NA	NA	False	NA	NA	NA	74890041	74898044	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74890090_74890437_74890655_74891378_74891580_74892660_74892803_74893137_74893321_74896151_74896326_74897010_74897220_74897511
transcript_66805.known	chr15	+	2809	7	FSM	ENSG00000178802.18	ENST00000566377.5	2809	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	58.9170792064765	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCTGCTAAAGGGAACCCA	74885717	True	NA	6	True	AATAAA	-19	NA	74890038	74899441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74890090_74890526_74890655_74891378_74891580_74892660_74892803_74893137_74893321_74896151_74896326_74897511
transcript_66808.known	chr15	+	1619	7	FSM	ENSG00000178802.18	ENST00000323744.10	1619	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	66.7599347579736	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGGGGTAATGAGCACT	74885720	True	NA	15	True	ATTAAA	-17	NA	74890041	74898228	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74890090_74890526_74890655_74891378_74891580_74892660_74892803_74896151_74896326_74897010_74897220_74897511
transcript_66810.known	chr15	+	1523	7	FSM	ENSG00000178802.18	ENST00000535694.5	1523	7	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	57.9417811255401	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGACCAGGTAATTTCTA	74885720	True	NA	NA	False	NA	NA	NA	74890041	74898077	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74890090_74891378_74891580_74892660_74892803_74893137_74893321_74896151_74896326_74897010_74897220_74897511
transcript_66821.known	chr15	+	1481	6	FSM	ENSG00000178802.18	ENST00000563422.5	1481	6	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	30.2892720282281	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGCTCAGGTTAGGAGGC	74885720	True	NA	NA	False	AATACA	-39	NA	74890041	74896930	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74890090_74890526_74890655_74891378_74891580_74892660_74892803_74893137_74893321_74896151
transcript_66827.known	chr15	+	851	6	FSM	ENSG00000178802.18	ENST00000561470.5	851	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	72.0155538755344	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGCTACAGCTGCACC	74885720	True	NA	NA	False	NA	NA	NA	74890041	74896188	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74890202_74890526_74890655_74891378_74891580_74892660_74892803_74893137_74893321_74896151
transcript_66831.known	chr15	+	1148	5	FSM	ENSG00000178802.18	ENST00000565576.5	1148	5	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	33.8045854877707	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGGGTGTGGTCACTG	74885740	True	NA	8	True	NA	NA	NA	74890061	74893786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74890090_74890526_74890655_74891378_74891580_74892660_74892803_74893137
transcript_66836.known	chr15	-	673	5	FSM	ENSG00000178761.15	ENST00000563413.5	673	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	57.1139212451745	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGTTAGAGAAAAACTGCT	-74902926	True	NA	NA	False	NA	NA	NA	74906805	74901919	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74902064_74902603_74902787_74904663_74904713_74905153_74905232_74906586
transcript_66837.known	chr15	-	1145	5	FSM	ENSG00000178761.15	ENST00000570143.5	1145	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	16.9022927438854	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAGCATAAAGTGAGTCC	-74902963	True	NA	NA	False	NA	NA	NA	74906842	74902099	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74902784_74904663_74904713_74904981_74905060_74905153_74905232_74906586
transcript_66840.known	chr15	-	742	4	FSM	ENSG00000178761.15	ENST00000563877.5	742	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	64.5875805055086	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCCCATCTGGGCTGTGG	-74906873	True	NA	NA	False	NA	NA	NA	74906883	74902468	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74902787_74904663_74904713_74905153_74905232_74906586
transcript_66843.known	chr15	-	533	3	FSM	ENSG00000178761.15	ENST00000569761.1	533	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	19	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTAGACATTACCCTCCA	-74906870	False	NA	NA	False	NA	NA	NA	74906880	74902625	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74902787_74905153_74905232_74906586
transcript_66845.known	chr15	-	865	7	FSM	ENSG00000178761.15	ENST00000563671.5	865	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	77.2521125205576	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGAGCTGTGTCTGTGTTG	-74902914	True	NA	-11	True	AATAAA	-14	NA	74906793	74899991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74900138_74901949_74902064_74902603_74902787_74904663_74904713_74905153_74905232_74906277_74906366_74906586
transcript_66846.known	chr15	-	2721	6	FSM	ENSG00000178761.15	ENST00000563119.5	2721	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	74.9175546851337	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGAGCTGTGTCTGTGTTG	-74902958	True	NA	-11	True	AATAAA	-14	NA	74906837	74899991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74902064_74902603_74902787_74904663_74904713_74905153_74905232_74906277_74906366_74906586
transcript_66847.known	chr15	-	4706	3	FSM	ENSG00000178761.15	ENST00000566894.1	4706	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	99	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGAGCTGTGTCTGTGTT	-74902917	True	NA	-12	True	AATAAA	-13	NA	74906796	74899992	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74902787_74904663_74906366_74906586
transcript_66851.known	chr15	-	1173	5	FSM	ENSG00000178741.12	ENST00000322347.11	1173	5	0	0	0	0	multi-exon	FALSE	canonical	3	4027	junction_1	125.680895525135	1277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCTTGTCTTAGAAGCG	-74896930	True	NA	33	True	ATTAAA	-18	NA	74938073	74919790	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74920443_74923647_74923771_74926765_74926888_74929115_74929233_74937914
transcript_66852.known	chr15	-	579	4	FSM	ENSG00000178741.12	ENST00000567270.5	579	4	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_3	1784.79024600154	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTATTTGTTTCATGTG	-74896937	True	NA	-5	True	AATAAA	-24	NA	74938080	74920274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74920443_74923647_74923771_74926765_74926888_74937914
transcript_66854.known	chr15	-	571	4	FSM	ENSG00000178741.12	ENST00000568783.5	571	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	2017.40146392994	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATTAGGTATTTGTTTC	-74896940	True	NA	-10	True	AATAAA	-19	NA	74938083	74920279	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74920443_74926765_74926888_74929115_74929233_74937914
transcript_66856.known	chr15	-	441	3	FSM	ENSG00000178741.12	ENST00000562233.5	441	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	2145.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTATTTGTTTCATGTG	-74896927	True	NA	-5	True	AATAAA	-24	NA	74938070	74920274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74920443_74929115_74929233_74937914
transcript_66857.known	chr15	-	2355	1	FSM	ENSG00000178718.7	ENST00000322177.6	2355	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	402	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACGTTCTGTGGCTGACT	-74950239	True	NA	-3	True	AATAAA	-18	NA	74956772	74954417	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_74954400_74956800
transcript_66860.nic	chr15	+	3461	8	NIC	ENSG00000198794.12	novel	3427	8	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	65.8569879142894	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTCTGCTGTGTCATGT	74990527	True	NA	14	True	AATAAA	-19	NA	74995546	75021493	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_74995674_75007660_75007729_75011791_75011847_75012676_75012806_75016592_75016750_75017869_75017972_75018417_75018536_75018788
transcript_66864.known	chr15	+	3379	7	FSM	ENSG00000198794.12	ENST00000425597.8	3379	7	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_3	39.1269301973291	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTGCTGTGTCATGTGT	74990543	True	NA	16	True	AATAAA	-21	NA	74995562	75021495	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74995674_75011791_75011847_75012676_75012806_75016592_75016750_75017869_75017972_75018417_75018536_75018788
transcript_66874.known	chr15	+	1206	6	FSM	ENSG00000198794.12	ENST00000562765.5	1206	6	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_3	34.5519898124551	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGGGTGGGTACAGGCC	74990553	True	NA	NA	False	NA	NA	NA	74995572	75019489	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74995674_75011791_75011847_75012676_75012806_75017869_75017972_75018417_75018536_75018788
transcript_66879.known	chr15	+	593	3	FSM	ENSG00000198794.12	ENST00000567535.5	593	3	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	7.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTCCACTGGAGTAACTT	74990564	True	NA	NA	False	NA	NA	NA	74995583	75013124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74995674_75011791_75011847_75012676
transcript_66881.known	chr15	+	3427	8	FSM	ENSG00000198794.12	ENST00000361900.10	3427	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	71.4831220267685	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTGCTGTGTCATGTGT	74990578	True	NA	16	True	AATAAA	-21	NA	74995597	75021495	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_74995674_74997233_74997317_75011791_75011847_75012676_75012806_75016592_75016750_75017869_75017972_75018417_75018536_75018788
transcript_66882.known	chr15	+	277	1	FSM	ENSG00000260483.2	ENST00000565251.2	277	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCTTTTTGAGATACTGT	75022964	False	NA	NA	False	NA	NA	NA	75022979	75023256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75023000_75023300
transcript_66884.known	chr15	+	2215	6	FSM	ENSG00000138621.12	ENST00000342932.8	2215	6	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	70.612746724653	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATCAAGAACCAACTTCTT	75020539	True	NA	10	True	AATAAA	-18	NA	75023589	75050726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75023627_75028246_75028454_75043440_75043537_75044385_75044515_75048552_75048722_75049149
transcript_66888.known	chr15	+	926	5	FSM	ENSG00000138621.12	ENST00000568649.5	926	5	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_3	94.7918772891433	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGAGAGTCCTGGCTGAG	75020554	True	NA	NA	False	NA	NA	NA	75023604	75049581	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75023627_75028246_75028454_75043440_75043537_75048552_75048722_75049149
transcript_66890.known	chr15	+	464	5	FSM	ENSG00000138621.12	ENST00000569562.5	464	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	77.3252061102976	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGACAAAGTGAAAGAAGTC	75020539	True	NA	NA	False	NA	NA	NA	75023589	75049182	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75023627_75043440_75043537_75044385_75044515_75048552_75048722_75049149
transcript_66892.known	chr15	+	1127	4	FSM	ENSG00000138621.12	ENST00000568207.5	1127	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	54.5221667458903	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTTGGGTGTGATTTCT	75020535	True	NA	NA	False	NA	NA	NA	75023585	75045168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75023627_75028246_75028454_75043440_75043537_75044385
transcript_66895.known	chr15	+	757	4	FSM	ENSG00000138621.12	ENST00000564923.5	757	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	101.161037734671	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCAGTGTTGTCCTCAC	75020536	True	NA	NA	False	NA	NA	NA	75023586	75049490	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75023627_75028246_75028454_75048552_75048722_75049149
transcript_66903.known	chr15	+	4425	3	FSM	ENSG00000167173.19	ENST00000394987.5	4425	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	4.5	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGGCCTGTCCGTGTGTT	75196262	True	NA	28	True	ATTAAA	-22	NA	75201881	75212169	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75202060_75205998_75208825_75210748
transcript_66911.known	chr15	+	895	8	FSM	ENSG00000140365.16	ENST00000267935.13	895	8	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_1	177.035797141109	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCAGGGGGTTCTGTT	75327201	True	NA	15	True	AATAAA	-17	NA	75336062	75340273	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75336093_75338061_75338134_75338354_75338421_75338645_75338686_75338984_75339105_75339263_75339345_75339701_75339879_75339964
transcript_66912.nnic	chr15	+	1012	8	NIC	ENSG00000140365.16	novel	895	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	110	junction_1	242.284282340782	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCAGGGGGTTCTGTT	75327222	True	NA	15	True	AATAAA	-17	NA	75336083	75340273	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_75336231_75338061_75338134_75338354_75338421_75338645_75338686_75338984_75339105_75339263_75339345_75339701_75339879_75339964
transcript_66914.known	chr15	+	722	7	FSM	ENSG00000140365.16	ENST00000338995.10	722	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_6	302.505096375802	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCAGGGGGTTCTGTT	75327197	True	NA	15	True	AATAAA	-17	NA	75336058	75340273	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75336093_75338061_75338134_75338354_75338421_75338645_75338686_75338984_75339105_75339263_75339345_75339964
transcript_66917.known	chr15	+	639	7	FSM	ENSG00000140365.16	ENST00000564815.5	639	7	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	306.281143541173	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGGGAGGCAGCCCTGGTT	75327191	True	NA	NA	False	NA	NA	NA	75336052	75340073	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75336093_75338061_75338134_75338645_75338686_75338984_75339105_75339263_75339345_75339701_75339879_75339964
transcript_66923.known	chr15	+	536	5	FSM	ENSG00000140365.16	ENST00000565517.5	536	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	342.802694709362	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGCAGAAGCACTTGCG	75327201	True	NA	NA	False	NA	NA	NA	75336062	75339307	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75336093_75338061_75338139_75338354_75338421_75338645_75338686_75338984
transcript_66926.known	chr15	+	926	4	FSM	ENSG00000140365.16	ENST00000567023.5	926	4	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_1	210.042852770572	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGCATGGAGAGTCCAG	75327198	True	NA	NA	False	NA	NA	NA	75336059	75339400	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75336093_75338061_75338134_75338354_75338421_75338645
transcript_66929.known	chr15	-	3177	26	FSM	ENSG00000140400.18	ENST00000569482.5	3177	26	0	0	0	0	multi-exon	FALSE	canonical	1	37	junction_3	38.0052627934606	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTCAGTCCCCTT	-75365393	True	NA	0	True	AATAAA	-16	NA	75368592	75355791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_75356033_75356109_75356220_75356300_75356381_75356605_75356686_75356792_75356903_75358200_75358345_75358461_75358619_75358703_75358809_75359058_75359154_75359327_75359426_75359619_75359776_75359902_75359989_75360089_75360212_75360564_75360689_75361045_75361192_75361285_75361382_75361603_75361721_75361854_75361948_75362342_75362454_75362641_75362749_75363998_75364189_75364487_75364666_75366521_75366593_75367510_75367635_75368072_75368199_75368482
transcript_66931.known	chr15	-	3261	26	FSM	ENSG00000140400.18	ENST00000267978.10	3261	26	0	0	0	0	multi-exon	FALSE	canonical	1	83	junction_2	32.1711920823584	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTCAGTCCCCTT	-75365408	True	NA	0	True	AATAAA	-16	NA	75368607	75355791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_75356033_75356109_75356220_75356300_75356450_75356605_75356686_75356792_75356903_75358200_75358345_75358461_75358619_75358703_75358809_75359058_75359154_75359327_75359426_75359619_75359776_75359902_75359989_75360089_75360212_75360564_75360689_75361045_75361192_75361285_75361382_75361603_75361721_75361854_75361948_75362342_75362454_75362641_75362749_75363998_75364189_75364487_75364666_75366521_75366593_75367510_75367635_75368072_75368199_75368482
transcript_66950.known	chr15	-	2961	24	FSM	ENSG00000140400.18	ENST00000563622.5	2961	24	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_19	43.5459907239294	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTCAGTCCCCTT	-75365405	True	NA	0	True	AATAAA	-16	NA	75368604	75355791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_75356033_75356109_75356220_75356300_75356450_75356605_75356686_75356792_75356903_75358200_75358345_75358461_75358619_75358703_75358809_75359058_75359154_75359327_75359426_75359619_75359776_75359902_75359989_75360089_75360212_75360564_75360689_75361045_75361192_75361285_75361382_75361603_75361721_75361854_75361948_75362342_75362454_75364487_75364666_75366521_75366593_75367510_75367635_75368072_75368199_75368482
transcript_66961.nnic	chr15	-	3732	23	NIC	ENSG00000140400.18	novel	3300	26	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_2	40.3386747140502	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTCAGTCCCCTT	-75365419	True	NA	0	True	AATAAA	-16	NA	75368618	75355791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_75356033_75356109_75356220_75356293_75356450_75356605_75356686_75356792_75356903_75358200_75358345_75358461_75358809_75359058_75359776_75359902_75359989_75360089_75360212_75360564_75360689_75361045_75361192_75361285_75361382_75361603_75361721_75361854_75361948_75362342_75362454_75362641_75362749_75363998_75364189_75364487_75364666_75366521_75366593_75367510_75367635_75368072_75368199_75368482
transcript_66976.known	chr15	-	6723	21	FSM	ENSG00000169375.16	ENST00000394947.8	6723	21	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_20	50.4325291850409	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGTATTTTTTTTTGT	-75449190	False	2500	-9	True	ATTAAA	-14	NA	75451690	75369378	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_75372210_75375664_75375873_75380628_75380724_75381612_75381706_75384263_75384438_75389651_75389822_75392241_75392816_75394679_75394864_75396257_75396497_75400039_75400157_75400729_75400941_75401851_75401971_75407054_75407145_75409835_75409992_75410133_75410287_75411491_75411744_75412762_75413046_75414204_75414312_75422646_75422824_75430186_75430409_75451422
transcript_66977.known	chr15	-	5050	21	FSM	ENSG00000169375.16	ENST00000360439.8	5050	21	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_20	72.0558117017635	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAAACTCTCAACCCACG	-75453283	True	NA	41	True	AATAAA	-23	NA	75455783	75370932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_75372210_75375664_75375873_75380628_75380724_75381612_75381706_75384263_75384438_75389651_75389822_75392241_75392816_75394679_75394864_75396257_75396497_75400039_75400157_75400729_75400941_75401851_75401971_75407054_75407145_75409835_75409992_75410133_75410287_75411491_75411744_75412762_75413046_75414204_75414312_75422646_75422824_75430186_75430409_75455634
transcript_66978.nic	chr15	-	4946	21	NIC	ENSG00000169375.16	novel	5050	21	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_20	75.7740720827382	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAAACTCTCAACCCACG	-75453332	True	NA	41	True	AATAAA	-23	NA	75455832	75370932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_75372210_75375664_75375873_75380628_75380724_75381612_75381706_75384263_75384438_75389651_75389822_75392241_75392816_75394679_75394864_75396257_75396497_75400039_75400157_75400729_75400941_75401851_75401971_75407054_75407145_75409835_75409992_75410133_75410287_75411491_75411744_75412762_75413046_75414204_75414312_75422646_75422824_75430186_75430409_75455787
transcript_66982.nic	chr15	-	4749	21	NIC	ENSG00000169375.16	novel	4930	21	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_20	75.7740720827382	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTCTAGCTTCTTGTGTA	-75453332	True	NA	-11	True	ATTAAA	-29	NA	75455832	75371129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_75372210_75375664_75375873_75380628_75380724_75381612_75381706_75384263_75384438_75389651_75389822_75392241_75392816_75394679_75394864_75396257_75396497_75400039_75400157_75400729_75400941_75401851_75401971_75407054_75407145_75409835_75409992_75410133_75410287_75411491_75411744_75412762_75413046_75414204_75414312_75422646_75422824_75430186_75430409_75455787
transcript_66991.nic	chr15	-	3761	20	ISM	ENSG00000169375.16	ENST00000394947.8	6723	21	-26	6443	-26	-82	5prime_fragment	FALSE	canonical	3	202	junction_19	46.8402128535536	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGGGAAGGAAGGAAACA	-75449216	False	2500	-11	True	NA	NA	NA	75451716	75375821	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_75375873_75380628_75380724_75381612_75381706_75384263_75384438_75389651_75389822_75392241_75392816_75394679_75394864_75396257_75396497_75400039_75400157_75400729_75400941_75401851_75401971_75407054_75407145_75409835_75409992_75410133_75410287_75411491_75411744_75412762_75413046_75414204_75414312_75422646_75422824_75430186_75430409_75451422
transcript_66999.nic	chr15	-	3438	19	NIC	ENSG00000140400.18	novel	3261	26	NA	NA	-12	125	intron_retention	FALSE	canonical	3	98	junction_13	17.3981161176848	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCCAGGCGCAGTGTTCT	-75365425	True	NA	NA	False	AATACA	-5	NA	75368624	75357609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_75358345_75358461_75358809_75359058_75359426_75359619_75359776_75359902_75359989_75360089_75360212_75360564_75360689_75361045_75361192_75361285_75361382_75361603_75361721_75361854_75361948_75362342_75362454_75362641_75362749_75363998_75364189_75364487_75364666_75366521_75366593_75367510_75367635_75368072_75368199_75368482
transcript_67.known	SIRV1	-	1363	6	FSM	SIRV1A	SIRV103	1363	6	0	0	0	0	multi-exon	FALSE	canonical	3	1470	junction_5	2371.66899882762	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10791	1000	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV1_-_1485_6337_6474_6560_6814_7552_7815_10282_10367_10647
transcript_6701.nic	chr1	-	1655	5	ISM	ENSG00000116560.11	ENST00000357214.6	3740	10	-27	6330	-27	-6330	5prime_fragment	FALSE	canonical	3	1936	junction_4	90.8250378475011	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATGAAAGATGCAAAAGACA	-35193159	False	NA	-32	True	AAAACA	-25	NA	35193172	35189265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_35189383_35190497_35190594_35190693_35190996_35191340_35191530_35192221
transcript_67021.nic	chr15	-	2683	15	ISM	ENSG00000169375.16	ENST00000394947.8	6723	21	-26	23358	-26	-8729	5prime_fragment	FALSE	canonical	3	202	junction_14	35.6800550242094	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGGAAGATGCTGCTGCT	-75449216	False	2500	NA	False	NA	NA	NA	75451716	75392736	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_75392816_75394679_75394864_75396257_75396497_75400039_75400157_75400729_75400941_75401851_75401971_75407054_75407145_75409835_75409992_75410133_75410287_75411491_75411744_75412762_75413046_75414204_75414312_75422646_75422824_75430186_75430409_75451422
transcript_67024.nic	chr15	-	2489	14	ISM	ENSG00000169375.16	ENST00000394947.8	6723	21	-26	25416	-26	-10787	5prime_fragment	FALSE	canonical	3	202	junction_13	32.431812857241	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAAATACTACTTGAAGT	-75449216	False	2500	NA	False	NA	NA	NA	75451716	75394794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_75394864_75396257_75396497_75400039_75400157_75400729_75400941_75401851_75401971_75407054_75407145_75409835_75409992_75410133_75410287_75411491_75411744_75412762_75413046_75414204_75414312_75422646_75422824_75430186_75430409_75451422
transcript_6703.known	chr1	-	1431	3	FSM	ENSG00000116560.11	ENST00000466213.5	1431	3	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_1	193	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTGGTTTTGTTTTTGT	-35179192	False	NA	-8	True	AATAAA	-17	NA	35179246	35176379	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_35176472_35177318_35177400_35177988
transcript_67038.known	chr15	+	3711	10	FSM	ENSG00000140398.14	ENST00000355059.9	3711	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	13.2832392301142	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGAATGATCATGAGTATCA	75346935	True	NA	NA	False	AATAAA	-18	NA	75347038	75357115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75347474_75348883_75349340_75352110_75352231_75352323_75352388_75352601_75352702_75353738_75353867_75354249_75354278_75354430_75354493_75354652_75354819_75354963
transcript_6704.known	chr1	-	2835	3	FSM	ENSG00000116560.11	ENST00000468598.5	2835	3	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_1	130	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTTTTGTTTTTGTTT	-35180604	False	NA	-6	True	AATAAA	-19	NA	35180645	35176377	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_35176475_35177318_35177400_35177988
transcript_67045.known	chr15	+	1797	10	FSM	ENSG00000140398.14	ENST00000569035.5	1797	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	12.3087843770011	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGGCACCTCTTGGTC	75347303	True	NA	15	True	AATAAA	-15	NA	75347637	75355247	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75348027_75348883_75349340_75352110_75352231_75352323_75352388_75352601_75352702_75353738_75353867_75354249_75354278_75354430_75354493_75354652_75354819_75354963
transcript_6706.nic	chr1	+	5600	31	NIC	ENSG00000146463.12	novel	7366	30	NA	NA	-45	-1873	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	65.1429197994686	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGTGAAGTGGTCTTGAT	NA	False	NA	20	True	AATAAA	-22	NA	35268663	35420185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_35269086_35295926_35295989_35325359_35325406_35358924_35359447_35361193_35361256_35361618_35361790_35370028_35370114_35370371_35370628_35381258_35381434_35381545_35381759_35385441_35385593_35386073_35386190_35387002_35387279_35387453_35387605_35388909_35389083_35389947_35390099_35392211_35392353_35392646_35392685_35393594_35393740_35396551_35396671_35397376_35397546_35398412_35398467_35398863_35399044_35399481_35399577_35405022_35405195_35405372_35405469_35408007_35408160_35413971_35414084_35415465_35415715_35418442_35418573_35419469
transcript_67065.known	chr15	-	4078	3	FSM	ENSG00000169375.16	ENST00000567289.5	4078	3	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_2	51.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAATTGTCATGATATTT	-75449164	False	2500	NA	False	ATTAAA	-20	NA	75451664	75419209	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_75422824_75430186_75430409_75451422
transcript_67068.known	chr15	+	1430	1	FSM	ENSG00000260274.1	ENST00000563278.1	1430	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTAGGTAAAACTTACTC	75367981	True	NA	NA	False	AATAAA	-23	NA	75368154	75369584	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75368200_75369600
transcript_67072.nnic	chr15	-	4030	14	NNC	ENSG00000169410.11	novel	7839	13	NA	NA	-157	1734	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	55.891166432694	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCCTTTTAGCTTCATC	-75579326	False	NA	-7	True	TATAAA	-16	NA	75579472	75467126	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_-_75468984_75469791_75470000_75470679_75470831_75473688_75473768_75479847_75479915_75490207_75490302_75505674_75506004_75508916_75509028_75517258_75517365_75523120_75523246_75524208_75524299_75527117_75527262_75578713_75579299_75579388
transcript_67075.known	chr15	-	7839	13	FSM	ENSG00000169410.11	ENST00000618819.5	7839	13	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_4	23.6800138419629	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTGGAAGTCTGGAGTC	-75579169	False	NA	-2	True	AATAAA	-20	NA	75579315	75463250	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_75468984_75469791_75470000_75470679_75470831_75473688_75473768_75479847_75479915_75490207_75490302_75505674_75506004_75508916_75509028_75517258_75517365_75523120_75523246_75524208_75524299_75527117_75527262_75578713
transcript_6708.known	chr1	+	7366	30	FSM	ENSG00000146463.12	ENST00000314607.11	7366	30	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	46.3565512675621	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGAAATTTTTTTTATG	35263711	True	NA	NA	False	AGTAAA	-27	NA	35268708	35422058	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_35269086_35325359_35325406_35358924_35359447_35361193_35361256_35361618_35361790_35370028_35370114_35370371_35370628_35381258_35381434_35381545_35381759_35385441_35385593_35386073_35386190_35387002_35387279_35387453_35387605_35388909_35389083_35389947_35390099_35392211_35392353_35392646_35392685_35393594_35393740_35396551_35396671_35397376_35397546_35398412_35398467_35398863_35399044_35399481_35399577_35405022_35405195_35405372_35405469_35408007_35408160_35413971_35414084_35415465_35415715_35418442_35418573_35419469
transcript_67086.known	chr15	-	1641	10	FSM	ENSG00000169371.14	ENST00000567134.5	1641	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	157.182444909266	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTTGTGGTTCTTAAGC	-75622493	True	NA	NA	False	AATATA	-20	NA	75625794	75598082	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_75598682_75601137_75601219_75605149_75605228_75607215_75607314_75609557_75609652_75609889_75609995_75617407_75617553_75620893_75621057_75622341_75622491_75625665
transcript_67089.known	chr15	-	1682	9	FSM	ENSG00000169371.14	ENST00000564675.5	1682	9	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_8	110.929031366906	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATCCACAATGTAAATATA	-75622392	True	NA	NA	False	NA	NA	NA	75625693	75598121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_75598682_75601137_75601219_75605149_75605228_75607215_75607314_75609557_75609652_75609889_75609995_75617407_75617553_75620893_75621057_75625335
transcript_67090.known	chr15	-	1420	9	FSM	ENSG00000169371.14	ENST00000308588.10	1420	9	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_8	72.3911898990478	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGGTTTGTGGTTCTTA	-75622424	True	NA	NA	False	AATATA	-17	NA	75625725	75598085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_75598682_75601137_75601219_75605149_75605228_75607215_75607314_75609557_75609652_75609889_75609995_75617407_75617553_75620893_75621057_75625665
transcript_67093.nic	chr15	-	2111	8	ISM	ENSG00000169371.14	ENST00000308588.10	1420	9	14	1751	14	954	5prime_fragment	FALSE	canonical	3	200	junction_7	77.2005075588687	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCCAGTCACTGCAAGC	-75622410	True	NA	NA	False	AAGAAA	-15	NA	75625711	75599836	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_75601219_75605149_75605228_75607215_75607314_75609557_75609652_75609889_75609995_75617407_75617553_75620893_75621057_75625665
transcript_67094.nic	chr15	-	378	3	ISM	ENSG00000169371.14	ENST00000308588.10	1420	9	-70	19382	-1	52	5prime_fragment	FALSE	canonical	3	200	junction_2	94	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGATGAAGAAATGGACAT	-75622494	True	NA	NA	False	AAGAAA	-9	NA	75625795	75617467	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_75617553_75620893_75621057_75625665
transcript_67096.known	chr15	+	8002	2	FSM	ENSG00000173548.9	ENST00000308527.6	8002	2	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	0	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGCCCCTTTCTGTTGGT	75646261	True	NA	9	True	ATTAAA	-16	NA	75647911	75662301	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75650574_75656961
transcript_67097.known	chr15	-	1132	1	FSM	ENSG00000177971.9	ENST00000403490.3	1132	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	637	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTAATCTGTCTGGTTT	-75628161	True	NA	-8	True	AATAAA	-26	NA	75640224	75639092	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_75639100_75640200
transcript_67098.known	chr15	+	2968	13	FSM	ENSG00000140367.12	ENST00000267938.9	2968	13	0	0	0	0	multi-exon	TRUE	canonical	3	132	junction_2	16.975472502015	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTACTTTCTCATTTTTCC	75841553	True	NA	58	True	TTTAAA	-37	NA	75843446	75901078	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75843847_75854385_75854488_75859877_75859983_75868950_75869011_75873427_75873569_75876186_75876272_75877960_75878022_75879097_75879189_75883365_75883425_75890434_75890484_75890918_75891015_75896994_75897062_75899426
transcript_67102.known	chr15	+	10707	7	FSM	ENSG00000167196.14	ENST00000308275.8	10707	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	258.921910149673	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGAGCTTTTCATTTTG	75892089	True	NA	15	True	AATAAA	-15	NA	75903877	75942511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75904104_75904490_75904630_75913202_75913291_75914109_75914206_75917229_75917395_75929883_75930050_75932684
transcript_67110.known	chr15	+	1486	6	FSM	ENSG00000167196.14	ENST00000453211.6	1486	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	275.737846513677	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGGAGCCATTACTT	75892089	True	NA	NA	False	GATAAA	-15	NA	75903877	75930655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75904104_75904490_75904630_75913202_75913291_75914109_75914206_75917229_75917395_75929883
transcript_67114.known	chr15	+	725	6	FSM	ENSG00000167196.14	ENST00000565036.5	725	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	339.298924254115	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGCGATGCAGCGCCTCA	75892193	True	NA	NA	False	NA	NA	NA	75903981	75932798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75904104_75904490_75904630_75913202_75913291_75914109_75914206_75929883_75930050_75932684
transcript_67116.known	chr15	+	2164	6	FSM	ENSG00000167196.14	ENST00000569022.1	2164	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	259.577040587183	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCTGTGCAGGTATGAC	75892089	True	NA	15	True	AATAAA	-15	NA	75903877	75934107	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_75904104_75913202_75913291_75914109_75914206_75917229_75917395_75929883_75930050_75932684
transcript_67128.known	chr15	+	2292	11	FSM	ENSG00000169758.13	ENST00000484722.5	2292	11	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_2	2.42693221990232	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCAGTTGGTGGAGGTT	76059432	True	NA	7	True	AATAAA	-17	NA	76059957	76204962	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_76060017_76134167_76134302_76137706_76137896_76156603_76156653_76160094_76160169_76169815_76169873_76170992_76171132_76175558_76175675_76191967_76192158_76202201_76202265_76203740
transcript_67130.known	chr15	+	2372	11	FSM	ENSG00000169758.13	ENST00000388942.8	2372	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	2.58650343127551	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCAGTTGGTGGAGGTTT	76059459	True	NA	8	True	AATAAA	-18	NA	76059984	76204963	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_76060017_76134167_76134302_76137706_76137896_76156603_76156759_76160094_76160169_76169815_76169873_76170992_76171132_76175558_76175675_76191967_76192158_76202201_76202265_76203740
transcript_67142.known	chr15	-	2289	12	FSM	ENSG00000140374.17	ENST00000557943.6	2289	12	0	0	0	0	multi-exon	TRUE	canonical	3	649	junction_11	92.6840362657583	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGGCATTTCAGTCTTC	-76303855	True	NA	0	True	TATAAA	-19	NA	76311469	76215352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_76216598_76225848_76225930_76231332_76231399_76274411_76274495_76283756_76283826_76285636_76285739_76286370_76286482_76287845_76287946_76292430_76292514_76292618_76292701_76295590_76295738_76311349
transcript_67144.known	chr15	-	1346	11	FSM	ENSG00000140374.17	ENST00000433983.6	1346	11	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_10	220.114152202897	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTAAAAAAGCACGGCTAT	-76303790	True	NA	NA	False	NA	NA	NA	76311404	76216083	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_76216598_76225848_76225930_76231332_76231399_76274411_76274495_76283756_76283826_76285636_76285739_76286370_76286482_76287845_76287946_76292430_76292514_76292618_76292701_76311349
transcript_67145.known	chr15	-	917	11	FSM	ENSG00000140374.17	ENST00000688389.1	2477	11	334	1226	-4	-24	multi-exon	FALSE	canonical	3	20	junction_4	270.660839428241	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTGAGATATTGAAGAAAAA	-76303782	True	NA	NA	False	NA	NA	NA	76311396	76216582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_76216598_76225848_76225930_76231332_76231399_76274411_76274495_76285636_76285739_76286370_76286482_76287845_76287946_76292430_76292514_76292618_76292701_76295590_76295738_76311349
transcript_67147.known	chr15	-	942	10	FSM	ENSG00000140374.17	ENST00000560726.5	942	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	285.56376987753	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAGAGCTACATTTCATA	-76303852	True	NA	-85	True	NA	NA	NA	76311466	76216467	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_76216598_76225848_76225930_76231332_76231399_76274411_76274495_76283756_76283826_76285636_76285739_76286370_76286482_76287845_76287946_76292430_76292514_76311349
transcript_6715.nic	chr1	+	3281	18	ISM	ENSG00000146463.12	ENST00000314607.11	7366	30	-45	28332	-45	-3736	5prime_fragment	FALSE	canonical	3	151	junction_1	46.1622683292431	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGCCAGACAGGTATGTT	NA	False	NA	NA	False	ACTAAA	-34	NA	35268663	35393726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_35269086_35325359_35325406_35358924_35359447_35361193_35361256_35361618_35361790_35370028_35370114_35370371_35370628_35381258_35381434_35381545_35381759_35385441_35385593_35386073_35386190_35387002_35387279_35387453_35387605_35388909_35389083_35389947_35390099_35392211_35392353_35392646_35392685_35393594
transcript_67150.known	chr15	-	792	9	FSM	ENSG00000140374.17	ENST00000559602.5	792	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	304.506747667437	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATCATTGGAAAGCATGGA	-76303800	True	NA	-100	True	NA	NA	NA	76311414	76216482	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_76216598_76225848_76225930_76231332_76231399_76274411_76274495_76283756_76283826_76285636_76285739_76286370_76286482_76287845_76287946_76311349
transcript_67153.known	chr15	+	1831	6	FSM	ENSG00000159556.10	ENST00000290759.9	1831	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.979795897113271	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGACGCCACTCCTCTGTGC	76336743	True	NA	NA	False	AATAAA	-16	NA	76336772	76342475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_76336942_76337777_76337968_76338251_76338515_76340275_76340560_76341133_76341302_76341718
transcript_67154.known	chr15	-	5033	32	FSM	ENSG00000140386.13	ENST00000563290.6	5033	32	0	0	0	0	multi-exon	TRUE	canonical	2	22	junction_31	8.11211757883866	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGATGGTTCTGAATGAGTT	-76904561	True	NA	NA	False	AATAAA	-17	NA	76905340	76347903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_76348737_76351236_76351289_76353948_76354141_76376161_76376312_76381377_76381616_76404523_76404680_76434077_76434311_76471211_76471336_76504858_76504975_76574157_76574285_76621763_76621830_76665652_76665790_76701757_76701866_76702849_76703003_76705902_76705985_76728594_76728738_76733228_76733385_76753807_76753949_76764960_76765073_76765336_76765455_76765562_76765639_76766917_76767089_76771741_76771955_76774854_76775118_76795279_76795441_76800247_76800365_76804532_76804634_76841733_76841932_76857808_76857880_76862415_76862534_76883811_76883877_76905298
transcript_67158.known	chr15	-	2507	19	FSM	ENSG00000140386.13	ENST00000564590.5	2507	19	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	9.86279328375206	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAGAAAAGAAAAAGCT	-76904665	True	NA	NA	False	NA	NA	NA	76905444	76702965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_76703003_76705902_76705985_76728594_76728738_76733228_76733385_76753807_76753949_76764960_76765073_76765336_76765455_76765562_76765639_76766917_76767089_76771723_76771955_76774854_76775118_76795279_76795441_76800247_76800365_76804532_76804634_76841733_76841932_76857808_76857880_76862415_76862534_76883811_76883877_76905298
transcript_67174.known	chr15	+	1750	8	FSM	ENSG00000117906.14	ENST00000320963.9	1750	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	643.004744959799	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTTTCATTTTTGAGTG	76921431	True	NA	-26	True	NA	NA	NA	76931737	76949860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_76931986_76932360_76932467_76935525_76935723_76941636_76941691_76943757_76943872_76947420_76947518_76948409_76948553_76949069
transcript_67179.known	chr15	+	6218	7	FSM	ENSG00000117906.14	ENST00000394885.8	6218	7	0	0	0	0	multi-exon	FALSE	canonical	3	1392	junction_5	59.080923787256	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCTGCCTGCTATAAAAT	76921442	True	NA	NA	False	AATAAA	-13	NA	76931748	76954393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_76931986_76932360_76932467_76935525_76935723_76943757_76943872_76947420_76947518_76948409_76948553_76949069
transcript_67189.known	chr15	+	1052	10	FSM	ENSG00000140368.13	ENST00000557995.1	1052	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	2.62936879248872	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGTGCGTTCTGTTCTCC	77028252	True	NA	-8	True	NA	NA	NA	77028342	77037313	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_77028424_77028553_77028653_77029528_77029575_77030501_77030582_77031179_77031279_77032297_77032395_77032861_77032953_77035507_77035564_77035801_77035936_77037044
transcript_67192.known	chr15	-	6348	7	FSM	ENSG00000140391.15	ENST00000267970.9	6348	7	0	0	0	0	multi-exon	FALSE	canonical	3	927	junction_5	56.2069588416081	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	-77060515	True	NA	NA	False	NA	NA	NA	77071109	77041403	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_77046928_77052384_77052469_77052776_77052930_77054177_77054280_77055788_77055864_77056063_77056256_77070891
transcript_67193.known	chr15	-	1592	7	FSM	ENSG00000140391.15	ENST00000561277.5	1592	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	373.404048362271	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAATTCAATAAACTCTGT	-77060528	True	NA	-35	True	AATAGA	-5	NA	77071122	77046059	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_77046928_77052384_77052469_77052776_77052930_77054177_77054280_77055788_77055864_77056063_77056256_77071004
transcript_67197.known	chr15	+	4112	11	FSM	ENSG00000140382.15	ENST00000381714.7	4112	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	155.070338878846	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACCTGTTTCAATTTTAC	77420656	False	NA	19	True	ATTAAA	-17	NA	77420673	77485603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_77421005_77447718_77447812_77458403_77458497_77464239_77464388_77467094_77467308_77470909_77471043_77471782_77471815_77477554_77477631_77478294_77478511_77479178_77479322_77482969
transcript_67200.known	chr15	+	3805	10	FSM	ENSG00000140382.15	ENST00000336216.9	3805	10	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_9	36.8443506231214	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACCTGTTTCAATTTTAC	77418667	True	NA	19	True	ATTAAA	-17	NA	77420887	77485603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_77421005_77458403_77458497_77464239_77464388_77467094_77467308_77470909_77471043_77471782_77471815_77477554_77477631_77478294_77478511_77479178_77479322_77482969
transcript_67208.nic	chr15	+	1911	9	ISM	ENSG00000140382.15	ENST00000336216.9	3805	10	-457	5999	19	0	5prime_fragment	FALSE	canonical	3	376	junction_3	25.8215026673507	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTTTTTTCTTATGCTT	77420378	False	NA	7	True	AATAAA	-16	NA	77420430	77479604	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_77421005_77458403_77458497_77464239_77464388_77467094_77467308_77470909_77471043_77471782_77471815_77477554_77477631_77478294_77478511_77479178
transcript_67210.nic	chr15	+	2188	9	ISM	ENSG00000140382.15	ENST00000336216.9	3805	10	-196	5461	18	538	5prime_fragment	FALSE	canonical	3	376	junction_3	25.8215026673507	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCAGGCATGGTGGTAT	77419678	True	NA	NA	False	AATACA	-6	NA	77420691	77480142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_77421005_77458403_77458497_77464239_77464388_77467094_77467308_77470909_77471043_77471782_77471815_77477554_77477631_77478294_77478511_77479178
transcript_67217.known	chr15	+	747	3	FSM	ENSG00000140382.15	ENST00000560986.1	747	3	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_2	16	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGCCTGGGCAGTCATG	77418714	False	NA	NA	False	NA	NA	NA	77420934	77464823	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_77421005_77458403_77458497_77464239
transcript_67218.known	chr15	-	3477	2	FSM	ENSG00000169783.13	ENST00000355300.7	3477	2	0	0	0	0	multi-exon	TRUE	canonical	3	382	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGACTGTTCTCATTAT	-77631663	True	NA	NA	False	NA	NA	NA	77632912	77613026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_77615901_77632309
transcript_6722.nic	chr1	+	2613	14	NIC	ENSG00000146463.12	novel	7366	30	NA	NA	-45	-9953	combination_of_known_junctions	TRUE	canonical	3	45	junction_1	77.9108123084095	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTAATGGCAATGTGTG	NA	False	NA	NA	False	AATAAA	-1	NA	35268663	35387509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_35269086_35295926_35295989_35325359_35325406_35358924_35359447_35361193_35361256_35361618_35361790_35370028_35370114_35370371_35370628_35381258_35381434_35381545_35381759_35385441_35385593_35386073_35386190_35387002_35387279_35387453
transcript_67224.known	chr15	-	6215	14	FSM	ENSG00000103740.10	ENST00000258873.9	6215	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	4.96973086314249	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGTCTTCAAGTGCATT	-78234481	True	NA	NA	False	AAAAAG	-15	NA	78234565	78167467	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_78171530_78173592_78173840_78174384_78174525_78178613_78178832_78179549_78179781_78180754_78180937_78181968_78182146_78182465_78182616_78182704_78182786_78193505_78193627_78193931_78194021_78194505_78194727_78208001_78208103_78234370
transcript_67228.known	chr15	+	2110	12	FSM	ENSG00000166411.14	ENST00000560667.5	2110	12	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	114.726768476057	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTTCCAAGAGCTTTTA	78145276	True	NA	NA	False	NA	NA	NA	78149359	78169715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78149431_78155212_78155276_78156907_78157163_78157547_78157632_78160091_78160207_78161580_78161769_78162233_78162368_78163506_78163610_78163715_78163781_78164991_78165077_78166149_78166303_78168921
transcript_6723.nic	chr1	+	2551	13	ISM	ENSG00000146463.12	ENST00000314607.11	7366	30	-45	34549	-45	-9953	5prime_fragment	FALSE	canonical	3	151	junction_1	40.1146793580604	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTAATGGCAATGTGTG	NA	False	NA	NA	False	AATAAA	-1	NA	35268663	35387509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_35269086_35325359_35325406_35358924_35359447_35361193_35361256_35361618_35361790_35370028_35370114_35370371_35370628_35381258_35381434_35381545_35381759_35385441_35385593_35386073_35386190_35387002_35387279_35387453
transcript_67232.known	chr15	+	4083	11	FSM	ENSG00000166411.14	ENST00000299518.7	4083	11	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_6	13.6853936735485	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACTAGGTTTCTGTCTTG	78145278	True	NA	NA	False	AATAAA	-21	NA	78149361	78171945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78149431_78155212_78155276_78157547_78157632_78160091_78160207_78161580_78161769_78162233_78162368_78163506_78163610_78163715_78163781_78164991_78165077_78166149_78166303_78168921
transcript_67241.nic	chr15	-	1670	7	NIC	ENSG00000136425.14	novel	1499	6	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_5	223.707956943869	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTCTCCATGTATGCTA	NA	False	NA	-15	True	AGTAAA	-16	NA	78131565	78104648	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_78105333_78105738_78105935_78109234_78109383_78111164_78111277_78120567_78120662_78123704_78123740_78131164
transcript_67245.known	chr15	-	1499	6	FSM	ENSG00000136425.14	ENST00000258930.8	1499	6	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_4	96.0362431585076	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGCTTCTGATCCTTGA	-78129919	True	NA	28	True	NA	NA	NA	78131445	78104605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_78105333_78105738_78105935_78109234_78109383_78111164_78111277_78123704_78123740_78131164
transcript_67252.known	chr15	-	1511	5	FSM	ENSG00000136425.14	ENST00000539011.5	1511	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_4	205.784474633049	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTCTCCATGTATGCTA	-78131443	False	NA	-15	True	AGTAAA	-16	NA	78131535	78104648	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_78105333_78105738_78105935_78109234_78109383_78111164_78111277_78131164
transcript_67257.known	chr15	-	535	5	FSM	ENSG00000136425.14	ENST00000557917.5	535	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	226.870420063965	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCCACCATCCTGCCCT	-78131179	False	NA	NA	False	NA	NA	NA	78131271	78105283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_78105333_78105738_78105935_78109234_78109383_78123704_78123740_78131164
transcript_67260.known	chr15	-	934	4	FSM	ENSG00000136425.14	ENST00000557846.5	934	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	238.021007476231	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAGAGGGAAAAGCAGATA	-78131341	False	NA	-87	True	NA	NA	NA	78131433	78105011	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_78105333_78105738_78105935_78109234_78109383_78131164
transcript_67263.known	chr15	-	804	4	FSM	ENSG00000136425.14	ENST00000560618.5	804	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	218.09223329184	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCCCCAGTGTTGATTA	-78131171	False	NA	NA	False	NA	NA	NA	78131263	78105489	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_78105935_78109234_78109383_78111164_78111277_78131164
transcript_67267.known	chr15	+	559	2	FSM	ENSG00000166411.14	ENST00000560414.1	559	2	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCTTATATAGGCTTTG	78145308	True	NA	NA	False	NA	NA	NA	78149391	78155732	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78149431_78155212
transcript_67272.nnic	chr15	-	1188	11	NNC	ENSG00000140395.9	novel	1202	11	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_6	255.255969567805	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGTGTCCTTGAACATG	-78290107	True	NA	-4	True	CATAAA	-17	NA	78299646	78283234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_-_78283522_78285260_78285340_78286040_78286134_78288288_78288383_78289618_78289713_78289950_78290049_78292615_78292789_78293166_78293273_78294945_78294974_78295674_78295726_78299561
transcript_67273.known	chr15	-	1202	11	FSM	ENSG00000140395.9	ENST00000267973.7	1202	11	0	0	0	0	multi-exon	FALSE	canonical	3	664	junction_10	80.8609299971253	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGTGTCCTTGAACATG	-78290070	True	NA	-4	True	CATAAA	-17	NA	78299609	78283234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_78283522_78285260_78285340_78286040_78286134_78288288_78288383_78289618_78289713_78289950_78290100_78292615_78292789_78293166_78293273_78294945_78294974_78295674_78295726_78299561
transcript_67274.known	chr15	-	1266	11	FSM	ENSG00000140395.9	ENST00000558311.5	1266	11	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_10	247.425059361416	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGTGTCCTTGAACATG	-78290066	True	NA	-4	True	CATAAA	-17	NA	78299605	78283234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_78283522_78285260_78285340_78286040_78286134_78288288_78288383_78289618_78289713_78289950_78290100_78292615_78292789_78293166_78293273_78294945_78294974_78295674_78295794_78299561
transcript_67280.known	chr15	-	884	9	FSM	ENSG00000140395.9	ENST00000558459.5	884	9	0	0	0	0	multi-exon	FALSE	canonical	2	31	junction_6	271.709604863354	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGCTTTCTTAATGCAA	-78290052	True	NA	-25	True	NA	NA	NA	78299591	78283255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_78283522_78285260_78285340_78286040_78286134_78288288_78288383_78289618_78289713_78289950_78290100_78294945_78294974_78295674_78295726_78299561
transcript_67282.known	chr15	+	3245	8	FSM	ENSG00000140403.13	ENST00000394855.7	3245	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	11.6128008188009	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTTTGCTTTTTCCTTT	NA	False	NA	18	True	ATTAAA	-23	NA	78264085	78282196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78264394_78264756_78264896_78270496_78270678_78273094_78273200_78274196_78274425_78275497_78275729_78280044_78280146_78280244
transcript_67286.known	chr15	-	603	3	FSM	ENSG00000140395.9	ENST00000560946.1	603	3	0	0	0	0	multi-exon	FALSE	canonical	3	664	junction_2	83.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGCAGTGGCAGTGGCAG	-78290075	True	NA	NA	False	NA	NA	NA	78299614	78294474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_78294974_78295674_78295726_78299561
transcript_67288.known	chr15	+	1320	8	FSM	ENSG00000140403.13	ENST00000483802.6	1320	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	15.6479117730496	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTCTAGTCTGCATATG	78264172	True	NA	4	True	TATAAA	-1	NA	78264561	78280668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78264586_78264756_78264896_78270496_78270678_78273094_78273200_78274196_78274425_78275610_78275729_78280044_78280146_78280244
transcript_67289.known	chr15	+	2961	8	FSM	ENSG00000140403.13	ENST00000343789.7	2961	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	12.8476155176669	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTTTGCTTTTTCCTTT	78264172	True	NA	18	True	ATTAAA	-23	NA	78264561	78282196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78264586_78264756_78264896_78270496_78270678_78273094_78273200_78274196_78274425_78275497_78275729_78280044_78280146_78280244
transcript_67291.known	chr15	+	738	4	FSM	ENSG00000166426.8	ENST00000299529.7	738	4	0	0	0	0	multi-exon	FALSE	canonical	3	2941	junction_3	68.425141578224	1029	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTTCCCTTTTTTGGTTT	78298293	True	NA	30	True	ATTAAA	-20	NA	78340352	78348225	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78340499_78341042_78341222_78343498_78343613_78347926
transcript_67294.known	chr15	+	6324	22	FSM	ENSG00000136381.13	ENST00000258886.13	6324	22	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_6	20.1497792901604	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGATTCTTGTTCTGTTTT	78430033	True	NA	16	True	AATAAA	-19	NA	78438215	78501453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78438357_78439794_78439882_78462921_78463088_78465250_78465389_78466270_78466490_78470531_78470602_78471740_78471925_78473241_78473382_78476187_78476360_78478296_78478398_78483317_78483435_78484760_78484921_78485704_78485841_78487732_78487818_78488179_78488337_78488646_78488772_78490421_78490527_78490618_78490762_78493908_78494057_78494141_78494265_78497125_78497312_78498032
transcript_67300.nic	chr15	+	2193	16	ISM	ENSG00000136381.13	ENST00000258886.13	6324	22	0	12687	0	10	5prime_fragment	FALSE	canonical	3	138	junction_6	19.1550399518131	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGTAAGAGTCTTATGT	78430033	True	NA	NA	False	ATTAAA	-9	NA	78438215	78488766	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_78438357_78439794_78439882_78462921_78463088_78465250_78465389_78466270_78466490_78470531_78470602_78471740_78471925_78473241_78473382_78476187_78476360_78478296_78478398_78483317_78483435_78484760_78484921_78485704_78485841_78487732_78487818_78488179_78488337_78488646
transcript_67302.known	chr15	+	4396	8	FSM	ENSG00000136381.13	ENST00000560440.5	4396	8	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_6	6.86309265683675	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAACCAAGAGTAGAGGAGC	78430101	True	NA	NA	False	NA	NA	NA	78438283	78476700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78438357_78439794_78439882_78462921_78463088_78465250_78465389_78466270_78466490_78470531_78470602_78471740_78471925_78473241
transcript_67303.known	chr15	+	847	5	FSM	ENSG00000188266.14	ENST00000408962.6	847	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1.11803398874989	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACAAGTGCCAGGTCCTG	78507028	True	NA	NA	False	AATAAA	-20	NA	78507563	78537372	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78507672_78513083_78513426_78514967_78515108_78527379_78527564_78537299
transcript_67304.known	chr15	+	4378	9	FSM	ENSG00000041357.16	ENST00000044462.12	4378	9	0	0	0	0	multi-exon	FALSE	canonical	3	3132	junction_8	190.823052852636	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTACTCCTGTGTATAA	78513843	True	NA	NA	False	AATAAA	-14	NA	78540443	78552417	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78540540_78541904_78541931_78542176_78542220_78542482_78542646_78544189_78544268_78544868_78544958_78545633_78545765_78546574_78546699_78548789
transcript_67306.known	chr15	+	944	9	FSM	ENSG00000041357.16	ENST00000560217.5	944	9	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_3	1114.62605837115	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAGTGGGAAAATAGGACA	78513804	True	NA	NA	False	NA	NA	NA	78540404	78549037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78540540_78541904_78541931_78542176_78542220_78542575_78542646_78544189_78544268_78544868_78544958_78545633_78545765_78546574_78546699_78548789
transcript_67308.known	chr15	+	1094	9	FSM	ENSG00000041357.16	ENST00000559082.5	1094	9	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	1130.7164142149	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAAATGAAGGAATAAATT	78513820	True	NA	10	True	AATAAA	-11	NA	78540420	78549186	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78540464_78541904_78541931_78542176_78542220_78542482_78542646_78544189_78544268_78544868_78544958_78545633_78545765_78546574_78546699_78548789
transcript_6731.known	chr1	+	466	4	FSM	ENSG00000146463.12	ENST00000441447.1	466	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	76.630426217151	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAATAAGTTAAAAAAAGA	35268670	True	NA	NA	False	AATACA	-5	NA	35269032	35359229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_35269086_35295926_35295989_35325359_35325406_35358924
transcript_67310.known	chr15	+	786	9	FSM	ENSG00000041357.16	ENST00000559365.5	786	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	1173.50042607576	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACAGTAATCAGAGTTC	78514134	False	NA	NA	False	NA	NA	NA	78540734	78548820	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78540836_78541904_78541931_78542176_78542220_78542482_78542646_78544189_78544268_78544868_78544958_78545633_78545765_78546574_78546699_78548789
transcript_67312.known	chr15	+	635	8	FSM	ENSG00000041357.16	ENST00000557929.5	635	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	1253.16751327447	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAAATGACCTTGAAGTC	78513866	True	NA	19	True	TATAAA	-4	NA	78540466	78546610	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78540540_78541904_78541931_78542176_78542220_78542482_78542646_78544189_78544268_78544868_78544958_78545633_78545765_78546578
transcript_67314.known	chr15	+	773	8	FSM	ENSG00000041357.16	ENST00000558281.5	773	8	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_7	1226.35940399016	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCACCATTTCAGTGTAAAA	78513877	True	NA	NA	False	GATAAA	-30	NA	78540477	78548970	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78540540_78541904_78541931_78542176_78542220_78542482_78542646_78544189_78544268_78544868_78544958_78545633_78545765_78548789
transcript_67318.known	chr15	+	1019	8	FSM	ENSG00000041357.16	ENST00000413382.6	1019	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	1240.39233424636	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTGTAGCAGTAATTGT	78513826	True	NA	-19	True	AATAAA	-29	NA	78540426	78549204	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78540540_78541904_78541931_78542176_78542220_78544189_78544268_78544868_78544958_78545633_78545765_78546574_78546699_78548789
transcript_6732.nic	chr1	+	773	3	ISM	ENSG00000146463.12	ENST00000314607.11	7366	30	-45	62829	-45	0	5prime_fragment	FALSE	canonical	3	151	junction_1	29.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAATAAGTTAAAAAAAGA	NA	False	NA	NA	False	AATACA	-5	NA	35268663	35359229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_35269086_35325359_35325406_35358924
transcript_6733.nnic	chr1	+	1075	5	ISM	ENSG00000146463.12	ENST00000314607.11	7366	30	0	60372	0	2457	5prime_fragment	FALSE	canonical	3	151	junction_1	25.1694258973064	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATTAGAATTAAAGAAGAAC	35263711	True	NA	NA	False	AATAAA	-42	NA	35268708	35361686	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_35269086_35325359_35325406_35358924_35359447_35361193_35361256_35361618
transcript_67333.known	chr15	+	1051	6	FSM	ENSG00000169684.13	ENST00000559554.5	1051	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	58.5231578095372	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAATCCACAGTAAAGTTC	78563587	True	NA	-9	True	NA	NA	NA	78565570	78593535	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78565826_78580810_78580963_78586644_78586690_78588313_78588424_78589804_78589850_78593091
transcript_67334.nnic	chr15	+	1421	6	NNC	ENSG00000169684.13	novel	3623	6	NA	NA	-29	35	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	51.8706082478314	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGAATTCCAGTTGTATT	78563507	True	NA	26	True	AGTAAA	-20	NA	78565490	78593570	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_+_78565826_78580810_78580963_78586644_78586690_78588313_78588424_78589804_78590105_78593091
transcript_67335.nnic	chr15	+	1552	6	NNC	ENSG00000169684.13	novel	3623	6	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	51.8706082478314	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGACTACTTGATATAATT	78563507	True	NA	7	True	AATATA	-25	NA	78565490	78593701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_+_78565826_78580810_78580963_78586644_78586690_78588313_78588424_78589804_78590105_78593091
transcript_67336.nnic	chr15	+	1976	6	NNC	ENSG00000169684.13	novel	3623	6	NA	NA	-29	424	intron_retention	FALSE	canonical	3	19	junction_5	51.8706082478314	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTTTAAGGCTTACTTTA	78563507	True	NA	14	True	AATAAA	-21	NA	78565490	78594125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_+_78565826_78580810_78580963_78586644_78586690_78588313_78588424_78589804_78590105_78593091
transcript_67337.known	chr15	+	3623	6	FSM	ENSG00000169684.13	ENST00000299565.9	3623	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	44.1017006474807	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCTTTTGACTTATTGA	78563536	True	NA	NA	False	TATAAA	-13	NA	78565519	78595269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78565826_78580810_78580963_78586644_78586690_78588313_78588424_78589804_78590637_78593091
transcript_67340.known	chr15	-	3015	6	FSM	ENSG00000080644.16	ENST00000326828.6	3015	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	2.19089023002066	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGCTGTGACTCATGTTT	-78620632	True	NA	-4	True	AATAAA	-16	NA	78620996	78595308	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_78596733_78601252_78602265_78617023_78617134_78618616_78618662_78618775_78618916_78620712
transcript_67342.nic	chr15	+	1082	5	ISM	ENSG00000169684.13	ENST00000559554.5	1051	6	-80	3291	-29	-3030	5prime_fragment	FALSE	canonical	3	128	junction_2	12.7573508221731	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTCAGTACTTGTGTCT	78563507	True	NA	7	True	AATGAA	-20	NA	78565490	78590244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_78565826_78580810_78580963_78586644_78586690_78588313_78588424_78589804
transcript_67343.nic	chr15	+	2059	5	ISM	ENSG00000169684.13	ENST00000559554.5	1051	6	-80	2314	-29	-2053	5prime_fragment	FALSE	canonical	3	128	junction_2	12.7573508221731	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGGGCATGGTGGCAC	78563507	True	NA	NA	False	AATACA	-5	NA	78565490	78591221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_78565826_78580810_78580963_78586644_78586690_78588313_78588424_78589804
transcript_67344.nic	chr15	+	2229	5	ISM	ENSG00000169684.13	ENST00000559554.5	1051	6	-80	2144	-29	-1883	5prime_fragment	FALSE	canonical	3	128	junction_2	12.7573508221731	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTTTTAAAGAATGAGCC	78563507	True	NA	NA	False	NA	NA	NA	78565490	78591391	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_78565826_78580810_78580963_78586644_78586690_78588313_78588424_78589804
transcript_67345.nic	chr15	+	2464	5	ISM	ENSG00000169684.13	ENST00000559554.5	1051	6	-80	1909	-29	-1648	5prime_fragment	FALSE	canonical	3	128	junction_2	12.7573508221731	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGACATTTGATGTATATAT	78563507	True	NA	NA	False	AATAAA	-31	NA	78565490	78591626	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_78565826_78580810_78580963_78586644_78586690_78588313_78588424_78589804
transcript_6735.nnic	chr1	+	779	3	ISM	ENSG00000146463.12	ENST00000314607.11	7366	30	-64	62842	-64	-13	5prime_fragment	FALSE	canonical	3	151	junction_1	29.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAATACAAATTCAAAATA	NA	False	NA	NA	False	AATGAA	-3	NA	35268644	35359216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_35269086_35325359_35325406_35358924
transcript_67352.nic	chr15	+	454	2	ISM	ENSG00000169684.13	ENST00000559554.5	1051	6	-80	12606	-29	-12345	5prime_fragment	FALSE	canonical	3	144	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGACTTGCAATATCTCA	78563507	True	NA	NA	False	AATAAA	-8	NA	78565490	78580929	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_78565826_78580810
transcript_67356.known	chr15	-	2596	6	FSM	ENSG00000117971.12	ENST00000261751.8	2596	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	6.20966987850401	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGGCTCCTACCCCTCC	-78640678	True	NA	NA	False	AATAAA	-16	NA	78641210	78624110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_78625292_78628966_78629946_78631075_78631186_78631287_78631333_78635438_78635588_78641078
transcript_67365.known	chr15	-	5520	24	FSM	ENSG00000136378.15	ENST00000388820.5	5520	24	0	0	0	0	multi-exon	FALSE	canonical	2	60	junction_15	33.5627955873323	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGCGTGACTTCGTCTT	-78808220	True	NA	-8	True	CATAAA	-21	NA	78811464	78759205	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_78759579_78762402_78762566_78763698_78763846_78763925_78764100_78764554_78764708_78765644_78767052_78767378_78767593_78768132_78768260_78771161_78771304_78771584_78771830_78773082_78773204_78774166_78774301_78774623_78774794_78776187_78776334_78776748_78776842_78777443_78777589_78788230_78788375_78789688_78789839_78790669_78790795_78791139_78791224_78796589_78796787_78797947_78798114_78800191_78800548_78811120
transcript_6737.nnic	chr1	+	908	3	ISM	ENSG00000146463.12	ENST00000314607.11	7366	30	-64	62713	-64	116	5prime_fragment	FALSE	canonical	3	151	junction_1	29.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAGAAAAATAGAGACCTAA	NA	False	NA	NA	False	AAAACA	-23	NA	35268644	35359345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_35269086_35325359_35325406_35358924
transcript_67373.known	chr15	+	2359	13	FSM	ENSG00000185787.15	ENST00000331268.9	2359	13	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_3	2900.7599040309	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCAACGTTTCTCCCCTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	78872813	78898133	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78873058_78878212_78878260_78880511_78880580_78884966_78885084_78886140_78886228_78887268_78887350_78890988_78891015_78891483_78891573_78892211_78892314_78893538_78893628_78894057_78894231_78894819_78894905_78896982
transcript_67383.known	chr15	+	2172	12	FSM	ENSG00000185787.15	ENST00000426013.7	2172	12	0	0	0	0	multi-exon	FALSE	canonical	3	6640	junction_6	618.320211781501	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTCTCCCCTTTGATAGG	78771901	True	NA	NA	False	ATTAAA	-26	NA	78872889	78898139	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78873058_78878212_78878260_78880511_78880580_78886140_78886228_78887268_78887350_78890988_78891015_78891483_78891573_78892211_78892314_78893538_78893628_78894057_78894231_78894819_78894905_78896982
transcript_67388.known	chr15	+	1468	12	FSM	ENSG00000185787.15	ENST00000559345.5	1468	12	0	0	0	0	multi-exon	FALSE	canonical	2	42	junction_1	2290.27369615638	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACATGTTAATGCTATAT	78772016	True	NA	NA	False	NA	NA	NA	78873004	78897389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78873219_78878212_78878260_78880511_78880580_78886140_78886228_78887268_78887350_78890988_78891015_78891483_78891573_78892211_78892314_78893538_78893628_78894057_78894231_78894819_78894905_78896982
transcript_67408.known	chr15	+	933	7	FSM	ENSG00000185787.15	ENST00000561171.5	933	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	3029.28058932957	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCCATCCTTTGCAAGTC	78772036	False	NA	-74	True	AGTAAA	-1	NA	78873024	78897514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78873058_78878212_78878260_78880511_78880580_78886140_78886228_78887268_78887350_78894819_78894905_78896982
transcript_67416.known	chr15	+	448	5	FSM	ENSG00000185787.15	ENST00000559619.5	448	5	0	0	0	0	multi-exon	FALSE	canonical	3	7509	junction_3	297.362993662628	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTGTTGGAACCAGTAA	78771998	True	NA	NA	False	NA	NA	NA	78872986	78887443	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_78873058_78878212_78878260_78880511_78880580_78886140_78886228_78887268
transcript_67425.known	chr15	-	1540	13	FSM	ENSG00000103811.18	ENST00000677316.1	1540	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	31.3646784704635	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCATGCTGGTCCTGGG	-78944014	True	NA	-29	True	AATAAA	-24	NA	78945058	78921768	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_78922206_78922992_78923119_78925333_78925441_78927712_78927782_78929411_78929494_78931450_78931507_78932371_78932459_78934977_78935083_78935679_78935751_78937317_78937424_78939139_78939172_78944537_78944632_78944890
transcript_67426.known	chr15	-	2145	12	FSM	ENSG00000103811.18	ENST00000220166.10	2145	12	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_11	8.55222169192126	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTAGTAACATAAGACCAC	-78944002	True	NA	NA	False	AATATA	-19	NA	78945046	78921057	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_78922206_78922992_78923119_78925333_78925441_78927712_78927782_78929411_78929494_78931450_78931507_78932371_78932459_78934977_78935083_78935679_78935751_78937317_78937424_78939139_78939172_78944890
transcript_67427.known	chr15	-	1503	12	FSM	ENSG00000103811.18	ENST00000676808.1	1503	12	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_10	24.2238186178346	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCATGCTGGTCCTGGG	-78943998	True	NA	-29	True	AATAAA	-24	NA	78945042	78921768	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_78922206_78922992_78923119_78925333_78925441_78927712_78927782_78929411_78929494_78931450_78931507_78932371_78932459_78934977_78935083_78935679_78935751_78937317_78937497_78939139_78939172_78944890
transcript_67429.known	chr15	-	3693	11	FSM	ENSG00000103811.18	ENST00000527715.6	3693	11	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_10	8.63075894692929	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCTGGTCCTGGGCCAT	-78943985	True	NA	-25	True	AATAAA	-28	NA	78945029	78921764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_78922206_78922992_78923119_78925333_78927782_78929411_78929494_78931450_78931507_78932371_78932459_78934977_78935083_78935679_78935751_78937317_78937424_78939139_78939172_78944890
transcript_67431.known	chr15	-	1386	12	FSM	ENSG00000103811.18	ENST00000525807.6	1386	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	24.9485420829778	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGAGCATGCTGGTCCTG	-78943961	True	NA	-31	True	AATAAA	-22	NA	78945005	78921770	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_78922206_78922992_78923119_78925333_78925441_78927712_78927782_78929411_78929494_78931450_78931507_78932371_78932459_78934977_78935083_78935679_78935751_78937317_78937424_78939139_78939167_78944890
transcript_67432.known	chr15	-	1783	12	FSM	ENSG00000103811.18	ENST00000677448.1	1783	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_11	24.3985502888665	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAGATGGAGCATGCTGG	-78944005	True	NA	-36	True	AATAAA	-17	NA	78945049	78921775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_78922206_78922992_78923119_78925333_78925441_78927712_78927782_78929411_78929494_78931450_78931507_78932371_78932459_78934977_78935083_78935679_78935751_78937317_78937424_78939139_78939172_78944537
transcript_67434.known	chr15	+	1483	4	FSM	ENSG00000166557.14	ENST00000543455.1	1483	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	203.892673292157	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGGAGACTTGTGCCTT	79303844	True	NA	13	True	AATAAA	-15	NA	79311158	79322837	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_79311418_79313756_79314006_79314540_79314656_79321977
transcript_67437.known	chr15	+	1418	3	FSM	ENSG00000166557.14	ENST00000299705.10	1418	3	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_2	1.5	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGACTTGTGCCTTTAT	79303797	True	NA	16	True	AATAAA	-18	NA	79311111	79322840	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_79311418_79313756_79314006_79321977
transcript_67442.known	chr15	-	859	4	FSM	ENSG00000259332.3	ENST00000479961.1	859	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	328.75928377259	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAAATAATCAGTGTTTTA	-79918704	True	NA	NA	False	NA	NA	NA	79923744	79845194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_79845443_79889092_79889355_79907628_79907685_79923451
transcript_67446.nic	chr15	-	1023	3	NIC	ENSG00000136371.11	novel	948	3	NA	NA	-70	0	combination_of_known_junctions	FALSE	canonical	3	253	junction_2	283.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGGTGTTAATGTGAC	-79891546	True	NA	-1	True	ATTAAA	-34	NA	79897084	79844975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_79845443_79889092_79889355_79896790
transcript_67447.known	chr15	-	2301	3	FSM	ENSG00000136371.11	ENST00000258874.4	2301	3	0	0	0	0	multi-exon	TRUE	canonical	3	605	junction_2	107.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGCTGAATATGGGTTTG	-79891476	True	NA	NA	False	AGTAAA	-16	NA	79897014	79843546	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_79845443_79889092_79889355_79896871
transcript_67448.known	chr15	-	632	3	FSM	ENSG00000259332.3	ENST00000494999.1	632	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	399	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGGCTACTATGATGCCT	-79918714	True	NA	NA	False	NA	NA	NA	79923754	79845375	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_79845443_79889092_79889355_79923451
transcript_67449.nic	chr15	-	959	3	NIC	ENSG00000136371.11	novel	2301	3	NA	NA	-70	-64	combination_of_known_junctions	FALSE	canonical	3	253	junction_2	283.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAGTGTGAATAGTAGAA	-79891546	True	NA	-65	True	TATAAA	-19	NA	79897084	79845039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_79845443_79889092_79889355_79896790
transcript_67453.nnic	chr15	-	971	3	Fusion	ENSG00000288604.1_ENSG00000180953.11	novel	1004	3	NA	NA	-76	0	multi-exon	FALSE	canonical	3	34	junction_2	253.5	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTATATGCCATTTTTGTC	-79918738	True	NA	-11	True	AATAAA	-15	NA	79923778	79898846	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr15_-_79899126_79907628_79907685_79923142
transcript_67454.known	chr15	-	529	3	FSM	ENSG00000180953.11	ENST00000485386.1	529	3	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_2	92.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCCAGAGTTACAGAAAT	-79918662	True	NA	-16	True	AATAAA	-23	NA	79923702	79898903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_79899126_79907628_79907685_79923451
transcript_67456.nnic	chr15	-	672	3	NNC	ENSG00000180953.11	novel	529	3	NA	NA	-64	0	at_least_one_novel_splicesite	FALSE	canonical	3	95	junction_2	223	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTATATGCCATTTTTGTC	-79918726	True	NA	-11	True	AATAAA	-15	NA	79923766	79898846	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_-_79899126_79907628_79907707_79923451
transcript_67460.nnic	chr15	-	615	3	NNC	ENSG00000180953.11	novel	529	3	NA	NA	-64	0	at_least_one_novel_splicesite	FALSE	canonical	3	95	junction_2	223	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCCAGAGTTACAGAAAT	-79918726	True	NA	-16	True	AATAAA	-23	NA	79923766	79898903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_-_79899126_79907628_79907707_79923451
transcript_67463.known	chr15	+	1706	7	FSM	ENSG00000086666.19	ENST00000261749.11	1706	7	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_1	774.08715056295	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTTTTCTCTTATTCTT	80045732	True	NA	27	True	AATAAA	-27	NA	80059675	80138393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_80059810_80098415_80098579_80120327_80120499_80121711_80121821_80122699_80122801_80131179_80131294_80137479
transcript_67469.known	chr15	+	1602	7	FSM	ENSG00000086666.19	ENST00000559775.5	1602	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	862.740095406619	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAATAAAAAGGAAAACCA	80071968	True	NA	-8	True	NA	NA	NA	80072582	80138358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_80072648_80098415_80098579_80120327_80120499_80121711_80121821_80122699_80122801_80131179_80131294_80137479
transcript_67470.known	chr15	+	1472	6	FSM	ENSG00000086666.19	ENST00000558494.5	1472	6	0	0	0	0	multi-exon	FALSE	canonical	3	1569	junction_1	245.000734692776	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAGGAAAACCAGA	80045770	True	NA	-6	True	NA	NA	NA	80059713	80138360	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_80059810_80120327_80120499_80121711_80121821_80122699_80122801_80131179_80131294_80137479
transcript_67471.nic	chr15	+	1493	6	NIC	ENSG00000086666.19	novel	1706	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_2	734.048336283109	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTCCCTTGTATTACTT	80045732	True	NA	13	True	AATAAA	-13	NA	80059675	80138379	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_80059810_80120327_80120499_80121747_80121821_80122699_80122801_80131179_80131294_80137479
transcript_67481.known	chr15	+	1446	6	FSM	ENSG00000086666.19	ENST00000559835.5	1446	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	806.330602172583	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAGGAAAACCAGA	80071963	True	NA	-6	True	NA	NA	NA	80072577	80138360	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_80072648_80120327_80120499_80121711_80121821_80122699_80122801_80131179_80131294_80137479
transcript_67482.nic	chr15	+	615	5	ISM	ENSG00000086666.19	ENST00000561060.5	891	6	25	6437	3	0	5prime_fragment	FALSE	canonical	3	1569	junction_1	272.557333418127	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAAAAAAGAATCGCTG	80059499	False	NA	NA	False	NA	NA	NA	80059637	80131241	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_80059810_80120327_80120499_80121711_80121821_80122699_80122801_80131179
transcript_67483.known	chr15	+	582	5	FSM	ENSG00000086666.19	ENST00000564367.5	582	5	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_4	883.030860162882	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGATGCTGCTGAGAAAATC	80045746	True	NA	NA	False	NA	NA	NA	80059689	80137560	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_80059810_80120327_80120499_80121711_80121821_80122699_80122801_80137479
transcript_67488.known	chr15	+	1471	15	FSM	ENSG00000103876.14	ENST00000261755.9	1471	15	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	37.4798585365309	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGCAGATGCAGCTGTGTC	80152554	True	NA	22	True	AATAAA	-26	NA	80152793	80186343	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_80152842_80153025_80153136_80158059_80158171_80159755_80159878_80160409_80160460_80162245_80162337_80168051_80168150_80168263_80168317_80172148_80172249_80173013_80173145_80175015_80175092_80177536_80177584_80180123_80180226_80181041_80181160_80186129
transcript_67489.known	chr15	+	2152	15	FSM	ENSG00000103876.14	ENST00000407106.5	2152	15	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	35.0458154944848	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCCTGCATGTCCAGTGT	80152540	True	NA	NA	False	AATACA	-18	NA	80152779	80186946	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_80152906_80153025_80153136_80158059_80158171_80159755_80159878_80160409_80160460_80162245_80162337_80168051_80168150_80168263_80168317_80172148_80172249_80173013_80173145_80175015_80175092_80177536_80177584_80180123_80180226_80181041_80181160_80186129
transcript_6749.known	chr1	-	4777	21	FSM	ENSG00000142687.18	ENST00000325722.8	4777	21	0	0	0	0	multi-exon	TRUE	canonical	3	185	junction_20	32.5743764330186	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCTGTCTGCTGGGTGTG	-35552014	True	NA	-7	True	ATTAAA	-18	NA	35557403	35433491	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_35435082_35441046_35441139_35442245_35442337_35442905_35443029_35444160_35444304_35448172_35448333_35449866_35450006_35450357_35450510_35451627_35451777_35453556_35453690_35454361_35454486_35456012_35456242_35460304_35460438_35462620_35462714_35466607_35466696_35470862_35470961_35474804_35474907_35478965_35479213_35506611_35507136_35554349_35554520_35557206
transcript_67490.known	chr15	+	1456	14	FSM	ENSG00000103876.14	ENST00000561421.6	1456	14	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_8	12.2879649592696	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCAGCTGTGTCCACTTA	80152253	True	NA	28	True	AATAAA	-32	NA	80152998	80186349	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_80153136_80158059_80158171_80159755_80159878_80160409_80160460_80162245_80162337_80168051_80168150_80168263_80168317_80172148_80172249_80173013_80173145_80175015_80175092_80177536_80177584_80180123_80180226_80181041_80181160_80186129
transcript_67499.known	chr15	+	2124	5	FSM	ENSG00000103876.14	ENST00000558767.6	2124	5	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_3	4.06201920231798	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCAATGCTCACTTTCAT	80152554	True	NA	22	True	ATTAAA	-19	NA	80152793	80163744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_80153136_80158059_80158171_80159755_80159878_80160409_80160460_80162245
transcript_67505.known	chr15	-	998	5	FSM	ENSG00000259495.3	ENST00000656160.1	998	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6.06217782649107	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATCATCTTGCAACTTG	-80403920	True	NA	-21	True	AATAAA	-9	NA	80404214	80344868	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_80345128_80347698_80347785_80397943_80398007_80403501_80403586_80403708
transcript_67507.nnic	chr15	-	964	4	NIC	ENSG00000259495.3	novel	998	5	NA	NA	-29	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	3.68178700572909	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATCATCTTGCAACTTG	-80403949	True	NA	-21	True	AATAAA	-9	NA	80404243	80344868	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_80345128_80347698_80347785_80403501_80403586_80403708
transcript_67508.known	chr15	+	6523	19	FSM	ENSG00000172379.22	ENST00000303329.9	6523	19	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	3.98918290467028	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGGCCCAGGCCAAGTT	80403747	True	NA	NA	False	AATAAA	-21	NA	80404381	80597933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_80404547_80450879_80450995_80457928_80457977_80470217_80470432_80475009_80475224_80508155_80508259_80513910_80513977_80514319_80514406_80551198_80551276_80552639_80552775_80555064_80555140_80563087_80563240_80574147_80574221_80574986_80575111_80576865_80576966_80580410_80580550_80581238_80581405_80591567_80591705_80593599
transcript_6751.nic	chr1	-	4030	21	NIC	ENSG00000142687.18	novel	4777	21	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_20	55.2290458001947	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-35556816	False	NA	NA	False	NA	NA	NA	35557424	35434104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_35435082_35441046_35441139_35442245_35442337_35442905_35443029_35444160_35444304_35448172_35448333_35449866_35450006_35450357_35450510_35451627_35451777_35453556_35453690_35454361_35454486_35456012_35456242_35460304_35460438_35462620_35462714_35466607_35466696_35470862_35470961_35474804_35474907_35478965_35479213_35506611_35507136_35554349_35554520_35557361
transcript_67512.known	chr15	+	2361	3	FSM	ENSG00000136379.12	ENST00000258884.5	2361	3	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_2	2.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGGCTTGTGCAGTTT	80694426	True	NA	30	True	AATAAA	-18	NA	80695309	80755621	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_80696020_80749512_80749693_80754150
transcript_67517.known	chr15	-	4200	3	FSM	ENSG00000117899.11	ENST00000261758.6	4200	3	0	0	0	0	multi-exon	FALSE	canonical	3	870	junction_2	37	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGAAACCTGTATCAGAT	-80980268	True	NA	-5	True	AATAAA	-27	NA	80989819	80975751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_80979478_80981949_80982183_80989578
transcript_6752.known	chr1	-	3213	21	FSM	ENSG00000142687.18	ENST00000426982.6	3213	21	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_20	57.8863325837801	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGAATGGCTCTGTACCC	-35557047	True	NA	NA	False	NA	NA	NA	35557655	35434964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_35435082_35441046_35441139_35442245_35442337_35442905_35443029_35444160_35444304_35448172_35448333_35449866_35450006_35450357_35450510_35451627_35451777_35453556_35453690_35454361_35454486_35456012_35456242_35460304_35460438_35462620_35462714_35466607_35466696_35470862_35470961_35474804_35474907_35478965_35479213_35506611_35507136_35554349_35554520_35557549
transcript_67523.nnic	chr15	+	2994	2	Genic_Genomic	ENSG00000140406.4	novel	4866	1	NA	NA	-4	-1789	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATGGCTTTTTGCAATT	80997855	True	NA	0	True	ATTAAA	-13	NA	81000918	81003999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Genic_Genomic_chr15_+_81002608_81002694
transcript_67525.known	chr15	-	2683	4	FSM	ENSG00000172345.14	ENST00000560723.5	2683	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	4.24264068711928	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTCAATGTGTCTTCCAT	-81323731	True	NA	-6	True	TTTAAA	-26	NA	81324141	81312666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_81313404_81318408_81318503_81319338_81319457_81322407
transcript_67531.known	chr15	-	3405	2	FSM	ENSG00000183496.6	ENST00000329713.5	3405	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGTGGTGACTTTTTT	-82045690	True	NA	NA	False	AATAAA	-19	NA	82046018	82041777	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82044614_82045449
transcript_67533.known	chr15	-	4333	1	FSM	ENSG00000183496.6	ENST00000558133.1	4333	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCTTATCTTGTGTGGT	-82045791	True	NA	NA	False	AATAAA	-10	NA	82046119	82041786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82041800_82046100
transcript_67535.known	chr15	-	3546	20	FSM	ENSG00000140598.15	ENST00000650113.1	3546	20	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_10	53.3709643326314	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTAAAGAGGATGTTAGA	-82258378	True	NA	-21	True	AATAAA	-17	NA	82262638	82130240	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82130562_82138657_82138843_82151464_82152424_82157712_82157861_82163852_82163985_82214716_82214856_82219651_82219819_82220077_82220230_82225164_82225265_82227449_82227580_82228190_82228328_82229033_82229111_82230847_82230972_82238306_82238522_82240417_82240556_82241269_82241404_82252690_82252776_82259087_82259156_82261687_82261798_82262613
transcript_67542.nic	chr15	-	2329	18	ISM	ENSG00000140598.15	ENST00000268206.12	3643	20	-28	22060	-28	-136	5prime_fragment	FALSE	canonical	3	161	junction_9	24.7456262955951	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAAGAAGATCAAAGCAAA	-82258502	True	NA	NA	False	AAAAAG	-19	NA	82262762	82152292	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_82152424_82157712_82157861_82163852_82163985_82214716_82214856_82219651_82219819_82220077_82220230_82225164_82225265_82227449_82227573_82228190_82228328_82229033_82229111_82230847_82230972_82238306_82238522_82240417_82240556_82241269_82241404_82252690_82252776_82259087_82259156_82261687_82261798_82262613
transcript_67549.known	chr15	+	445	4	FSM	ENSG00000188659.10	ENST00000562097.5	445	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	2.05480466765633	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCTCTCCTTATGTAGC	82262526	True	NA	0	True	AATAAA	-11	NA	82262826	82264881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_82262933_82263138_82263189_82263358_82263439_82264672
transcript_67550.known	chr15	+	551	2	FSM	ENSG00000188659.10	ENST00000569120.1	551	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATATTTAGTAACTATT	82262517	True	NA	NA	False	AAGAAA	-44	NA	82262817	82265748	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_82263189_82265568
transcript_67551.known	chr15	+	262	2	FSM	ENSG00000188659.10	ENST00000565006.1	262	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTATGTAGCTCTCTTCT	82262843	False	NA	8	True	AATAAA	-19	NA	82263143	82264889	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_82263189_82264672
transcript_67577.known	chr15	+	648	5	FSM	ENSG00000259429.5	ENST00000618775.4	648	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	12.871965661856	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCAGATGTTAGAGGTCT	NA	False	NA	NA	False	NA	NA	NA	82355141	82414738	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_82355375_82400659_82400717_82404611_82404752_82408287_82408368_82414600
transcript_67582.known	chr15	-	636	2	FSM	ENSG00000237550.6	ENST00000418824.3	636	2	0	0	0	0	multi-exon	FALSE	canonical	2	36	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGTTCAAGCACAATAT	NA	False	NA	-4	True	AATAAA	-33	NA	82372912	82372195	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82372417_82372497
transcript_67583.known	chr15	-	579	1	FSM	ENSG00000237550.6	ENST00000466501.1	579	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTAAGAGTTACCTGGCT	NA	False	NA	NA	False	AAAAAG	-27	NA	82372888	82372309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82372300_82372900
transcript_67584.nic	chr15	-	3075	8	NIC	ENSG00000255769.7	novel	918	8	NA	NA	-32	1511	intron_retention	FALSE	canonical	3	53	junction_4	23.7529804789347	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGCTTCAGTTTTCTTA	NA	False	NA	NA	False	AATACA	-14	NA	82513982	82471481	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_82473482_82475477_82475616_82476785_82476941_82477032_82477124_82477202_82477299_82477393_82477583_82477837_82477927_82513665
transcript_67586.nnic	chr15	-	3017	8	NNC	ENSG00000255769.7	novel	918	8	NA	NA	-32	1511	intron_retention	FALSE	canonical	3	22	junction_4	33.1003421894884	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGCTTCAGTTTTCTTA	NA	False	NA	NA	False	AATACA	-14	NA	82513982	82471481	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_-_82473482_82475477_82475616_82476785_82476941_82477032_82477124_82477260_82477299_82477393_82477583_82477837_82477927_82513665
transcript_67605.nic	chr15	-	2613	8	NIC	ENSG00000255769.7	novel	918	8	NA	NA	-32	1049	intron_retention	FALSE	canonical	3	53	junction_4	23.7529804789347	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCTGTCTACTCAGTTT	NA	False	NA	-8	True	NA	NA	NA	82513982	82471943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_82473482_82475477_82475616_82476785_82476941_82477032_82477124_82477202_82477299_82477393_82477583_82477837_82477927_82513665
transcript_67607.nnic	chr15	-	2555	8	NNC	ENSG00000255769.7	novel	918	8	NA	NA	-32	1049	intron_retention	FALSE	canonical	3	22	junction_4	33.1003421894884	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCTGTCTACTCAGTTT	NA	False	NA	-8	True	NA	NA	NA	82513982	82471943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_-_82473482_82475477_82475616_82476785_82476941_82477032_82477124_82477260_82477299_82477393_82477583_82477837_82477927_82513665
transcript_67609.nnic	chr15	-	2635	8	NNC	ENSG00000255769.7	novel	918	8	NA	NA	-32	1049	intron_retention	FALSE	canonical	3	12	junction_2	39.0619602003519	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCTGTCTACTCAGTTT	NA	False	NA	-8	True	NA	NA	NA	82513982	82471943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_-_82473482_82475477_82475638_82476785_82476941_82477032_82477124_82477202_82477299_82477393_82477583_82477837_82477927_82513665
transcript_67613.nic	chr15	-	2976	7	NIC	ENSG00000255769.7	novel	918	8	NA	NA	-22	1511	intron_retention	FALSE	canonical	3	14	junction_6	41.1761122766856	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGCTTCAGTTTTCTTA	NA	False	NA	NA	False	AATACA	-14	NA	82513972	82471481	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_82473482_82475477_82475616_82476785_82476941_82477032_82477124_82477202_82477299_82477393_82477583_82513665
transcript_67616.nic	chr15	-	2979	7	NIC	ENSG00000255769.7	novel	1349	7	NA	NA	-32	1511	intron_retention	TRUE	canonical	3	29	junction_4	31.3953287395859	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGCTTCAGTTTTCTTA	NA	False	NA	NA	False	AATACA	-14	NA	82513982	82471481	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_82473482_82475477_82475616_82476785_82476941_82477032_82477124_82477393_82477583_82477837_82477927_82513665
transcript_6762.nic	chr1	-	3883	21	NIC	ENSG00000142687.18	novel	4777	21	NA	NA	-19	-147	combination_of_known_junctions	FALSE	canonical	3	44	junction_20	55.2290458001947	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCCGGGTTTGGTGGCGT	-35556816	False	NA	NA	False	AATAAA	-9	NA	35557424	35434251	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_35435082_35441046_35441139_35442245_35442337_35442905_35443029_35444160_35444304_35448172_35448333_35449866_35450006_35450357_35450510_35451627_35451777_35453556_35453690_35454361_35454486_35456012_35456242_35460304_35460438_35462620_35462714_35466607_35466696_35470862_35470961_35474804_35474907_35478965_35479213_35506611_35507136_35554349_35554520_35557361
transcript_67620.nic	chr15	-	4245	7	NIC	ENSG00000255769.7	novel	918	8	NA	NA	-32	1511	intron_retention	FALSE	canonical	3	53	junction_3	25.130769099961	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGCTTCAGTTTTCTTA	NA	False	NA	NA	False	AATACA	-14	NA	82513982	82471481	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_82473482_82475477_82476941_82477032_82477124_82477202_82477299_82477393_82477583_82477837_82477927_82513665
transcript_67622.known	chr15	-	983	7	FSM	ENSG00000255769.7	ENST00000618267.4	983	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_6	45.0841805219229	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATCAGAGTGAATGTTCT	NA	False	NA	NA	False	NA	NA	NA	82513950	82473784	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82473814_82475477_82475616_82476785_82476941_82477032_82477124_82477202_82477299_82477393_82477583_82513665
transcript_67638.known	chr15	-	1349	7	FSM	ENSG00000255769.7	ENST00000618004.4	1349	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	41.3699434640926	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACGCCTGTCCAGCGGCCT	NA	False	NA	NA	False	NA	NA	NA	82513950	82472992	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82473482_82475477_82475616_82476785_82476941_82477032_82477124_82477480_82477583_82477837_82477927_82513665
transcript_67643.nic	chr15	-	3783	7	NIC	ENSG00000255769.7	novel	918	8	NA	NA	-32	1049	intron_retention	FALSE	canonical	3	53	junction_3	25.130769099961	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCTGTCTACTCAGTTT	NA	False	NA	-8	True	NA	NA	NA	82513982	82471943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_82473482_82475477_82476941_82477032_82477124_82477202_82477299_82477393_82477583_82477837_82477927_82513665
transcript_67672.known	chr15	-	570	5	FSM	ENSG00000255769.7	ENST00000612379.4	570	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	51.1828828809007	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACCACAAGGAGGGGCAT	NA	False	NA	NA	False	NA	NA	NA	82513874	82476898	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82476941_82477032_82477124_82477393_82477583_82477837_82477927_82513715
transcript_67674.known	chr15	-	2112	12	FSM	ENSG00000214575.10	ENST00000615198.4	2112	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	4.69745843009593	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACGTGTCCAGAAGGTATT	-82647770	True	NA	NA	False	NA	NA	NA	82647977	82544272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82544703_82546440_82546522_82547142_82547238_82549459_82549659_82552479_82552617_82553466_82553557_82553877_82553992_82555869_82556123_82557759_82557987_82571343_82571533_82627192_82627368_82647855
transcript_67676.known	chr15	-	2068	10	FSM	ENSG00000214575.10	ENST00000617462.4	2068	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	4.74016200171145	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GGAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	82571809	82544296	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82544703_82546440_82546522_82547142_82547238_82549459_82549659_82552479_82552617_82553466_82553557_82553877_82553992_82555869_82556123_82557759_82557987_82571343
transcript_67678.known	chr15	-	488	5	FSM	ENSG00000182774.13	ENST00000647841.1	488	5	0	0	0	0	multi-exon	FALSE	canonical	3	9563	junction_4	1855.80636112715	2349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTCATCTTTGCAGT	-82433674	True	NA	-10	True	AATAAA	-18	NA	82540457	82536749	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82536882_82538305_82538372_82538879_82538986_82539980_82540133_82540425
transcript_67681.known	chr15	-	932	4	FSM	ENSG00000182774.13	ENST00000560639.1	932	4	0	0	0	0	multi-exon	FALSE	canonical	3	9563	junction_3	1911.97390730685	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTGAATTTTTTCTGTA	-82433669	True	NA	-27	True	NA	NA	NA	82540452	82536808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82536882_82538305_82538986_82539980_82540133_82540425
transcript_67682.known	chr15	-	1909	4	FSM	ENSG00000182774.13	ENST00000561157.5	1909	4	0	0	0	0	multi-exon	FALSE	canonical	3	9563	junction_3	2126.36878791573	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGCCTGTGTCATCTTT	-82433676	True	NA	-15	True	AATAAA	-13	NA	82540459	82536754	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82538372_82538879_82538986_82539980_82540133_82540425
transcript_67683.known	chr15	-	580	2	FSM	ENSG00000182774.13	ENST00000559273.1	580	2	0	0	0	0	multi-exon	FALSE	canonical	3	9563	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGTAGCTGGGATTAGAG	-82433673	True	NA	NA	False	NA	NA	NA	82540456	82539583	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82540133_82540425
transcript_67684.known	chr15	-	583	6	FSM	ENSG00000182774.13	ENST00000558397.1	583	6	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	6365.81570578351	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGCCTGTGTCATCTT	-82433654	True	NA	-16	True	AATAAA	-12	NA	82540437	82536755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82536882_82537921_82538043_82538305_82538372_82538879_82538986_82539980_82540133_82540425
transcript_67685.known	chr15	-	3754	27	FSM	ENSG00000103723.17	ENST00000535359.6	3754	27	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	8.95286804068094	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGGCTCACCTTTCCT	-82709428	True	NA	-2	True	AATAAA	-15	NA	82709875	82659280	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82659711_82659844_82659984_82661824_82661923_82662167_82662253_82662693_82662923_82663126_82663234_82663559_82663621_82663800_82663976_82664366_82664491_82664834_82664944_82665246_82665304_82665456_82665576_82666746_82666934_82676460_82676638_82677273_82677384_82677670_82677804_82678104_82678168_82679728_82679801_82680174_82680230_82680471_82680756_82680836_82681020_82681111_82681179_82681419_82681581_82688735_82688832_82689157_82689233_82689377_82689454_82709593
transcript_67687.known	chr15	-	3683	26	FSM	ENSG00000103723.17	ENST00000642989.2	3683	26	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_25	8.58333268608412	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGGCTCACCTTTCCT	-82699454	False	447	-2	True	AATAAA	-15	NA	82699901	82659280	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82659711_82659844_82659984_82661824_82661923_82662167_82662253_82662693_82662923_82663126_82663234_82663559_82663621_82663800_82663976_82664366_82664491_82664834_82664944_82665456_82665576_82666746_82666934_82676460_82676638_82677273_82677384_82677670_82677804_82678104_82678168_82679728_82679801_82680174_82680230_82680471_82680756_82680836_82681020_82681111_82681179_82681419_82681581_82688735_82688832_82689157_82689233_82689377_82689454_82699633
transcript_67688.known	chr15	-	3697	26	FSM	ENSG00000103723.17	ENST00000668990.2	3697	26	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_22	7.78244177620366	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGGCTCACCTTTCCT	-82709428	True	NA	-2	True	AATAAA	-15	NA	82709875	82659280	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82659711_82659844_82659984_82661824_82661923_82662167_82662253_82662693_82662923_82663126_82663234_82663559_82663621_82663800_82663976_82664366_82664491_82664834_82664944_82665456_82665576_82666746_82666934_82676460_82676638_82677273_82677384_82677670_82677804_82678104_82678168_82679728_82679801_82680174_82680230_82680471_82680756_82680836_82681020_82681111_82681179_82681419_82681581_82688735_82688832_82689157_82689233_82689377_82689454_82709593
transcript_67689.known	chr15	-	3254	25	FSM	ENSG00000103723.17	ENST00000535348.5	3254	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	8.14953560367433	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCTATACCTCCCCATGA	-82709332	False	NA	NA	False	NA	NA	NA	82709779	82659531	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82659711_82659844_82659984_82661824_82661923_82662167_82662253_82662693_82662923_82663126_82663234_82663559_82663621_82663800_82663976_82664366_82664491_82664834_82664944_82665456_82665576_82666746_82666934_82676460_82676638_82677273_82677384_82677670_82677804_82678104_82678168_82679728_82679801_82680174_82680230_82680471_82680756_82680836_82681020_82681111_82681179_82681419_82681581_82689157_82689233_82689377_82689454_82709593
transcript_6769.nic	chr1	-	3661	20	NIC	ENSG00000142687.18	novel	4777	21	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	2	17	junction_18	63.1033097454565	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-35556816	False	NA	NA	False	NA	NA	NA	35557424	35434104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_35435082_35441046_35441139_35442245_35442337_35442905_35443029_35444160_35444304_35448172_35448333_35449866_35450006_35450357_35450510_35451627_35451777_35453556_35453690_35454361_35454486_35456012_35456242_35460304_35460438_35462620_35462714_35466607_35466696_35470862_35470961_35474804_35474907_35478965_35479213_35554349_35554520_35557206
transcript_67690.known	chr15	-	3420	25	FSM	ENSG00000103723.17	ENST00000666973.1	3420	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.65534115766418	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAGAGATGGCAGCCACT	-82709376	True	NA	-88	True	NA	NA	NA	82709823	82659366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82659711_82661824_82661923_82662167_82662253_82662693_82662923_82663126_82663234_82663559_82663621_82663800_82663976_82664366_82664491_82664834_82664944_82665456_82665576_82666746_82666934_82676460_82676638_82677273_82677384_82677670_82677804_82678104_82678168_82679728_82679801_82680174_82680230_82680471_82680756_82680836_82681020_82681111_82681179_82681419_82681581_82688735_82688832_82689157_82689233_82689377_82689454_82709593
transcript_67694.known	chr15	-	2650	18	FSM	ENSG00000103723.17	ENST00000660624.1	2650	18	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_6	6.65980038563248	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGGCTCACCTTTCC	-82680137	True	NA	-3	True	AATAAA	-14	NA	82680407	82659281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82659711_82659844_82659984_82661824_82661923_82662167_82662253_82662693_82662923_82663126_82663234_82663559_82663621_82663800_82663976_82664366_82664491_82664834_82664944_82665456_82665576_82666746_82666934_82676460_82676638_82677273_82677384_82677670_82677804_82678104_82678168_82679728_82679801_82680174
transcript_67696.nnic	chr15	-	2585	17	NIC	ENSG00000103723.17	novel	2650	18	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_16	8.42035294687818	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGGCTCACCTTTCC	-82680144	True	NA	-3	True	AATAAA	-14	NA	82680414	82659281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_82659711_82659844_82659984_82661824_82661923_82662167_82662253_82662693_82662923_82663126_82663234_82663559_82663621_82663800_82663976_82664366_82664491_82664834_82664944_82665456_82665576_82666746_82666934_82676460_82676638_82677273_82677384_82677670_82677804_82678104_82678168_82680174
transcript_67700.known	chr15	-	2425	13	FSM	ENSG00000103723.17	ENST00000664460.1	2425	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	8.25462833135986	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCCTGTTTTTGTAATAA	-82709396	True	NA	-46	True	NA	NA	NA	82709843	82675741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82676638_82677273_82677384_82677670_82677804_82678104_82678168_82679728_82679801_82680174_82680230_82680471_82680756_82680836_82681020_82681111_82681179_82681419_82681581_82689157_82689233_82689377_82689454_82709593
transcript_67702.known	chr15	-	3395	4	FSM	ENSG00000103723.17	ENST00000535513.2	3395	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	4.71404520791032	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAATAAATAAATAA	-82709472	True	NA	NA	False	NA	NA	NA	82709919	82685913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82688832_82689157_82689233_82689377_82689454_82709593
transcript_67703.known	chr15	+	1016	3	FSM	ENSG00000259462.3	ENST00000654760.1	1016	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTTTTAAGTGGGATAAAA	82648743	False	NA	NA	False	AAGAAA	-24	NA	82648764	82650829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_82648809_82649770_82649942_82650028
transcript_67708.known	chr15	+	674	5	FSM	ENSG00000250988.7	ENST00000559366.1	674	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	24.6715929765388	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTGTTGAGTTTTTAATC	82749806	True	NA	NA	False	AATAAA	-19	NA	82750583	82757206	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_82750849_82754628_82754785_82756729_82756786_82756903_82756940_82757045
transcript_67712.known	chr15	+	790	4	FSM	ENSG00000250988.7	ENST00000561107.5	790	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	9.56846672960488	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACGTGTTGAGTTTTTAA	82749794	True	NA	NA	False	AATAAA	-17	NA	82750571	82757204	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_82750849_82754628_82754785_82756729_82756786_82756903
transcript_67717.known	chr15	+	725	3	FSM	ENSG00000250988.7	ENST00000558174.5	725	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	33.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTGTTGAGTTTTTAATC	82749805	True	NA	NA	False	AATAAA	-19	NA	82750582	82757206	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_82750849_82754628_82754785_82756903
transcript_67720.known	chr15	+	594	2	FSM	ENSG00000250988.7	ENST00000544685.2	594	2	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTACAAAAAACAGTGTTGA	82749786	True	NA	NA	False	TATAAA	-9	NA	82750563	82754937	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_82750849_82754628
transcript_67722.known	chr15	+	5101	10	FSM	ENSG00000156232.7	ENST00000286760.5	5101	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	6.05530070819498	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCTTCTGTGCATCAA	82809375	True	NA	NA	False	AATAAA	-15	NA	82809627	82836108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_82810336_82813102_82813277_82816691_82816843_82817919_82818090_82819322_82819489_82823099_82823288_82826409_82826497_82826750_82826847_82830598_82831080_82833228
transcript_67725.known	chr15	-	1949	9	FSM	ENSG00000103942.13	ENST00000450735.7	1949	9	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_6	12.9903810567666	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTACACAGAATTTAGTG	-82951342	True	NA	-11	True	AATAAA	-17	NA	82952720	82848982	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82849904_82851150_82851232_82852141_82852253_82854643_82854801_82859028_82859136_82864166_82864260_82875272_82875405_82892684_82892842_82952530
transcript_67726.nnic	chr15	-	2503	9	NNC	ENSG00000103942.13	novel	1990	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	41.6803310927349	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTACACAGAATTTAGTG	-82951342	True	NA	-11	True	AATAAA	-17	NA	82952720	82848982	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_-_82849904_82851150_82851232_82852141_82852253_82854643_82854801_82859028_82859169_82864166_82864260_82875272_82875405_82892684_82892842_82952009
transcript_67727.known	chr15	-	1990	9	FSM	ENSG00000103942.13	ENST00000304231.12	1990	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_5	30.2438010177292	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTACACAGAATTTAGTG	-82951350	True	NA	-11	True	AATAAA	-17	NA	82952728	82848982	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82849904_82851150_82851232_82852141_82852253_82854643_82854801_82859028_82859169_82864166_82864260_82875272_82875405_82892684_82892842_82952530
transcript_67730.known	chr15	-	518	5	FSM	ENSG00000169609.14	ENST00000451195.7	518	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	71.5978351628036	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAGCTGACTCATCTATA	-83008554	True	NA	NA	False	AAAAAG	-11	NA	83011607	82990618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_82990656_82991931_82992047_83008547_83008676_83010236_83010364_83011496
transcript_67732.known	chr15	+	1565	4	FSM	ENSG00000169612.4	ENST00000304191.4	1565	4	0	0	0	0	multi-exon	FALSE	canonical	3	663	junction_2	18.4028983224563	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGGCAGTTAGCCCATT	82979282	True	NA	37	True	AATAAA	-34	NA	82986209	82991057	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_82986370_82987335_82987385_82989009_82989189_82989880
transcript_67740.known	chr15	-	419	4	FSM	ENSG00000169609.14	ENST00000563387.5	419	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	67.2772043282286	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTCCACAACGGTTCTG	-83008490	True	NA	-12	True	ATTAAA	-5	NA	83011543	83004866	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_83004973_83008547_83008676_83010236_83010364_83011485
transcript_67741.known	chr15	-	11274	4	FSM	ENSG00000169609.14	ENST00000304177.10	11274	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	79.2646761734941	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACCTTATATAATTTTTCA	-83008586	True	NA	-9	True	AATAAA	-20	NA	83011639	82994816	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_83005693_83008547_83008676_83010236_83010364_83011496
transcript_67748.known	chr15	-	541	3	FSM	ENSG00000169609.14	ENST00000565725.1	541	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	94.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGATTATAGGCGCATGCC	-83008586	True	NA	NA	False	NA	NA	NA	83011639	83008404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_83008676_83010236_83010364_83011496
transcript_67753.known	chr15	-	3194	8	FSM	ENSG00000064726.10	ENST00000261721.9	3194	8	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_4	53.9516034071656	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTATGTCATTTGCCT	-83063115	True	NA	NA	False	AATAAA	-26	NA	83067252	83016422	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_83018226_83018706_83018854_83020674_83020763_83030135_83030329_83041727_83041926_83050072_83050179_83056388_83056546_83066750
transcript_67759.known	chr15	-	1467	7	FSM	ENSG00000064726.10	ENST00000379403.2	1467	7	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	160.562985218332	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATAAGAAACAGTTTCTT	-83063014	False	NA	NA	False	AAAAAG	-32	NA	83067151	83017960	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_83018226_83018706_83018854_83030135_83030329_83041727_83041926_83050072_83050179_83056388_83056546_83066750
transcript_67765.known	chr15	-	934	7	FSM	ENSG00000166503.9	ENST00000563790.5	934	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	237.424139931521	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATATTCCTCTCTGTTGTG	-83203940	True	NA	NA	False	NA	NA	NA	83207541	83139131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_83139276_83151214_83151362_83157414_83157574_83157902_83158042_83163998_83164076_83192251_83192309_83207330
transcript_67768.known	chr15	-	12538	6	FSM	ENSG00000166503.9	ENST00000299633.7	12538	6	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_5	38.7422250264489	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGGTGTGTAACCTTGG	-83207223	True	NA	NA	False	AATAAA	-15	NA	83207823	83127752	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_83139276_83151214_83151362_83157414_83157574_83157902_83158042_83163998_83164076_83207330
transcript_67779.nic	chr15	-	776	4	ISM	ENSG00000166503.9	ENST00000299633.7	12538	6	56	29698	56	-100	5prime_fragment	FALSE	canonical	3	449	junction_3	19.6864307469779	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAGGCTCAAAACGGAAAAA	-83207722	False	NA	21	True	AAGAAA	-11	NA	83207767	83157450	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_83157574_83157902_83158042_83163998_83164076_83207330
transcript_67782.known	chr15	+	1647	9	FSM	ENSG00000140600.17	ENST00000563901.5	1647	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	27.7668867538296	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGCCTTGGTTATTTTT	83445646	True	NA	18	True	AATAAA	-20	NA	83447375	83618739	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_83447579_83559252_83559322_83565133_83565207_83568535_83568673_83572564_83572699_83576582_83576742_83586982_83587087_83588661_83588772_83618081
transcript_67785.nic	chr15	-	3447	8	NIC	ENSG00000225151.10	novel	2850	7	NA	NA	-32	465	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	36.1691039650231	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAGTTTTCTTATCTGA	NA	False	NA	-19	True	AATACA	-19	NA	84230168	84198845	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_84201209_84202869_84203021_84204176_84204332_84204425_84204517_84204599_84204692_84204786_84204976_84205230_84205320_84229851
transcript_67786.nic	chr15	-	3110	8	NIC	ENSG00000225151.10	novel	2525	7	NA	NA	-32	460	combination_of_known_junctions	FALSE	canonical	3	56	junction_1	24.454038521275	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGCTTCAGTTTTCTTA	NA	False	NA	-24	True	AATACA	-14	NA	84230168	84198850	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_84200877_84202869_84203021_84204176_84204332_84204425_84204517_84204599_84204692_84204786_84204976_84205230_84205320_84229851
transcript_67790.nic	chr15	-	3058	8	NIC	ENSG00000225151.10	novel	2525	7	NA	NA	-32	408	combination_of_known_junctions	FALSE	canonical	3	56	junction_1	24.454038521275	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGTTTTGCCTCTTACTT	NA	False	NA	-76	True	NA	NA	NA	84230168	84198902	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_84200877_84202869_84203021_84204176_84204332_84204425_84204517_84204599_84204692_84204786_84204976_84205230_84205320_84229851
transcript_67792.nic	chr15	-	2982	8	NIC	ENSG00000225151.10	novel	2850	7	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	36.1691039650231	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGTCTACTCAGTTTTT	NA	False	NA	NA	False	NA	NA	NA	84230168	84199310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_84201209_84202869_84203021_84204176_84204332_84204425_84204517_84204599_84204692_84204786_84204976_84205230_84205320_84229851
transcript_67793.nic	chr15	-	2649	8	NIC	ENSG00000225151.10	novel	2525	7	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_1	24.454038521275	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTGTCTACTCAGTTTT	NA	False	NA	NA	False	NA	NA	NA	84230168	84199311	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_84200877_84202869_84203021_84204176_84204332_84204425_84204517_84204599_84204692_84204786_84204976_84205230_84205320_84229851
transcript_67795.nnic	chr15	-	2614	8	NNC	ENSG00000225151.10	novel	2525	7	NA	NA	-32	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.2553026894725	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGACACCTGTCTACTCAG	NA	False	NA	NA	False	NA	NA	NA	84230168	84199315	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_-_84200846_84202869_84203021_84204176_84204332_84204425_84204517_84204599_84204692_84204786_84204976_84205230_84205320_84229851
transcript_67808.known	chr15	-	2850	7	FSM	ENSG00000225151.10	ENST00000400817.7	2850	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	47.4400206108256	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGTCTACTCAGTTTTT	NA	False	NA	NA	False	NA	NA	NA	84230125	84199310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_84201209_84202869_84203021_84204176_84204332_84204425_84204517_84204599_84204692_84204786_84204976_84229851
transcript_67814.nic	chr15	-	2494	7	NIC	ENSG00000225151.10	novel	2525	7	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	38.459574736194	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTGTCTACTCAGTTTT	NA	False	NA	NA	False	NA	NA	NA	84230168	84199311	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_84200877_84202869_84203021_84204425_84204517_84204599_84204692_84204786_84204976_84205230_84205320_84229851
transcript_67819.known	chr15	-	962	6	FSM	ENSG00000225151.10	ENST00000559654.5	962	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	47.8388963083389	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCCCCAGGCTCAGCCAT	NA	False	NA	NA	False	NA	NA	NA	84230090	84202708	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_84203021_84204425_84204517_84204599_84204692_84204786_84204976_84205230_84205320_84229901
transcript_67832.known	chr15	-	903	5	FSM	ENSG00000225151.10	ENST00000557980.5	903	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	52.1176553578535	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCATGGAGCCTGTTGTAA	NA	False	NA	NA	False	NA	NA	NA	84230090	84202728	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_84203021_84204425_84204517_84204599_84204692_84204786_84204976_84229851
transcript_67840.known	chr15	-	1631	8	FSM	ENSG00000189136.9	ENST00000561403.6	1631	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	4.16986271980755	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGACTCCATCTCAAAAA	-84570999	False	NA	NA	False	NA	NA	NA	84571009	84527210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_84527668_84538531_84538617_84539703_84539789_84542144_84542285_84546220_84546278_84554965_84555071_84569504_84569684_84570486
transcript_67841.nic	chr15	-	1988	9	NIC	ENSG00000177082.13	novel	2063	8	NA	NA	-12	0	combination_of_known_junctions	TRUE	canonical	3	30	junction_2	34.9622564346182	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGGGCATGGTGGCT	-84650827	True	NA	NA	False	NA	NA	NA	84654310	84642767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_84643724_84645470_84645837_84645972_84646086_84646183_84646349_84647889_84647955_84648536_84648626_84652713_84652803_84653631_84653700_84654233
transcript_67844.nic	chr15	-	1674	9	NIC	ENSG00000177082.13	novel	5331	8	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	34.9622564346182	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCCTAGTAGCAATTAAGG	-84650827	True	NA	-35	True	AATAAA	-15	NA	84654310	84643081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_84643724_84645470_84645837_84645972_84646086_84646183_84646349_84647889_84647955_84648536_84648626_84652713_84652803_84653631_84653700_84654233
transcript_67848.known	chr15	-	1915	8	FSM	ENSG00000177082.13	ENST00000398528.7	1915	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	28.0597031127471	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGGGCATGGTGGCT	-84654333	False	NA	NA	False	NA	NA	NA	84654343	84642767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_84643724_84645470_84645837_84646183_84646349_84647889_84647955_84648536_84648626_84652713_84652803_84653631_84653700_84654226
transcript_67871.known	chr15	-	1180	5	FSM	ENSG00000177082.13	ENST00000560252.5	1180	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	27.8691137282835	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGTCTCTACTAAAAATACA	-84650815	True	NA	NA	False	NA	NA	NA	84654298	84647085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_84647955_84648536_84648626_84652713_84652803_84653631_84653700_84654233
transcript_67875.known	chr15	+	8975	4	FSM	ENSG00000176700.21	ENST00000348993.9	8975	4	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_1	0.816496580927726	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGCTCTGAGTCTACTA	84631071	True	NA	2	True	ATTAAA	-15	NA	84631450	84647478	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_84632299_84637346_84637421_84638395_84638478_84639507
transcript_67876.known	chr15	+	993	3	FSM	ENSG00000176371.14	ENST00000334141.7	993	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	53.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGGAGTCCCTGCGTTT	84596809	True	NA	15	True	AATAAA	-25	NA	84601017	84606889	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_84601136_84603819_84604334_84606528
transcript_67877.known	chr15	+	906	3	FSM	ENSG00000176371.14	ENST00000379358.7	906	3	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_2	19.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTGCTTCCGAGCTCAT	84596841	True	NA	20	True	AATAAA	-21	NA	84601049	84616614	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_84601136_84603819_84604334_84616308
transcript_67878.known	chr15	+	3756	3	FSM	ENSG00000176371.14	ENST00000546148.6	3756	3	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	14.5	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGAGTCTGTCTTTTAC	84596800	True	NA	16	True	AATAAA	-17	NA	84601008	84623716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_84601136_84603819_84604334_84620601
transcript_67880.nic	chr15	+	1063	3	NIC	ENSG00000176371.14	novel	993	3	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_2	23.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGGAGTCCCTGCGTTT	84596792	True	NA	15	True	AATAAA	-25	NA	84601000	84606889	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_84601189_84603819_84604334_84606528
transcript_67881.nic	chr15	+	1008	3	NIC	ENSG00000176371.14	novel	906	3	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	83	junction_1	10.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTGCTTCCGAGCTCAT	84596792	True	NA	20	True	AATAAA	-21	NA	84601000	84616614	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_84601189_84603819_84604334_84616308
transcript_67882.known	chr15	+	3813	3	FSM	ENSG00000176371.14	ENST00000448803.6	3813	3	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	15.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGAGTCTGTCTTTTAC	84596796	True	NA	16	True	AATAAA	-17	NA	84601004	84623716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_84601189_84603819_84604334_84620601
transcript_67884.nic	chr15	+	2837	2	ISM	ENSG00000176371.14	ENST00000334141.7	993	3	-20	371	-7	-371	5prime_fragment	FALSE	canonical	3	143	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTACAGCTGTAGCTGT	84596789	True	NA	NA	False	ATTAAA	-20	NA	84600997	84606518	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_84601136_84603819
transcript_67885.nic	chr15	+	3201	2	ISM	ENSG00000176371.14	ENST00000334141.7	993	3	-20	7	-7	-7	intron_retention	FALSE	canonical	3	143	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGCTCACAGGAGTCCC	84596789	True	NA	8	True	AATAAA	-18	NA	84600997	84606882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_84601136_84603819
transcript_67888.known	chr15	-	2031	7	FSM	ENSG00000177082.13	ENST00000559126.5	2031	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	19.672315572906	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCCTAGTAGCAATTAAGG	-84650763	True	NA	-35	True	AATAAA	-15	NA	84654246	84643081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_84643724_84645470_84645837_84646183_84646349_84647889_84647955_84648536_84648626_84652713_84652803_84653631
transcript_67889.known	chr15	+	2390	3	FSM	ENSG00000176371.14	ENST00000327179.6	2390	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	71.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGGGCCGAGTCCTCAGA	84596841	True	NA	-29	True	NA	NA	NA	84601049	84622394	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_84601136_84603819_84604331_84620601
transcript_67890.known	chr15	-	655	3	FSM	ENSG00000197696.10	ENST00000360476.8	655	3	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_2	7.5	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGCCTGGTCCTCTCCTT	-84656634	True	NA	-1	True	AATAAA	-18	NA	84658199	84655131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_84655410_84657175_84657349_84657995
transcript_67892.known	chr15	-	1089	7	FSM	ENSG00000140612.14	ENST00000560266.5	1089	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	526.254928718012	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTATCCCTGAATTGTG	-84693781	True	NA	-12	True	AATAAA	-18	NA	84716111	84669543	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_84670070_84670724_84670783_84679931_84679970_84680712_84680833_84687624_84687775_84691534_84691645_84716024
transcript_67893.known	chr15	-	1223	7	FSM	ENSG00000140612.14	ENST00000455959.7	1223	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_6	521.95362182222	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTGCACATTGAACCCC	-84693833	True	NA	-28	True	AATAAA	-2	NA	84716163	84669559	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_84670070_84670724_84670783_84680712_84680833_84687624_84687775_84691534_84691645_84714730_84714867_84716024
transcript_67896.known	chr15	-	1079	6	FSM	ENSG00000140612.14	ENST00000268220.12	1079	6	0	0	0	0	multi-exon	FALSE	canonical	3	1052	junction_5	54.6721135497797	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTATCCCTGAATTGTG	-84693809	True	NA	-12	True	AATAAA	-18	NA	84716139	84669543	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_84670070_84670724_84670783_84680712_84680833_84687624_84687775_84691534_84691645_84716024
transcript_67901.known	chr15	-	1256	5	FSM	ENSG00000140612.14	ENST00000559729.5	1256	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	485.525166700965	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTGAATTGTGTTTGTC	-84715641	False	NA	-6	True	AATAAA	-24	NA	84716460	84669537	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_84670070_84670724_84670783_84680712_84680833_84691534_84691645_84716024
transcript_67902.known	chr15	-	882	5	FSM	ENSG00000140612.14	ENST00000558217.5	882	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	480.768330383772	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTTATCCCTGAATTGT	-84693733	True	NA	-13	True	AATAAA	-17	NA	84716063	84669544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_84670070_84670724_84670783_84687624_84687775_84691534_84691645_84716024
transcript_67903.known	chr15	-	971	5	FSM	ENSG00000140612.14	ENST00000558134.5	971	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	484.643876985978	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTATCCCTGAATTGTG	-84693759	True	NA	-12	True	AATAAA	-18	NA	84716089	84669543	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_84670070_84680712_84680833_84687624_84687775_84691534_84691645_84716024
transcript_67913.known	chr15	+	8187	11	FSM	ENSG00000166716.10	ENST00000560079.7	8187	11	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	19.9258625911151	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGTAGTTGTTTTCATT	84748051	True	NA	16	True	ATTAAA	-32	NA	84748591	84806445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_84748665_84764706_84764816_84778182_84778313_84782656_84784896_84790704_84790884_84797868_84798046_84798314_84798475_84798587_84798876_84799097_84799211_84799841_84799978_84801862
transcript_67919.known	chr15	+	4036	22	FSM	ENSG00000073417.15	ENST00000394553.6	4036	22	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_8	9.2194214800227	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTTTATCATCTTTTT	84981844	False	NA	NA	False	ATTAAA	-19	NA	84981855	85139142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_84982349_85064369_85064427_85067013_85067205_85075861_85075919_85076732_85076788_85083555_85083645_85089337_85089417_85091043_85091182_85097947_85098037_85100014_85100067_85100155_85100199_85109052_85109131_85113376_85113448_85113872_85114038_85115438_85115488_85115983_85116120_85117640_85117840_85120796_85121015_85123060_85123194_85126206_85126375_85136533_85136664_85137796
transcript_67925.nnic	chr15	-	2640	8	NNC	ENSG00000229212.8	novel	844	5	NA	NA	0	1531	intron_retention	FALSE	canonical	3	22	junction_1	32.9935058545076	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGTCTACTCAGTTTTT	NA	False	NA	NA	False	NA	NA	NA	85234785	85203908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_-_85205475_85207467_85207619_85208774_85208930_85209024_85209116_85209198_85209291_85209385_85209575_85209829_85209919_85234478
transcript_67942.known	chr15	+	5459	15	FSM	ENSG00000170776.22	ENST00000559362.5	5459	15	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_8	10.0772526220277	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTATCACTGTGGGCATT	85376726	True	NA	29	True	AATAAA	-26	NA	85380586	85684874	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_85380799_85485709_85485754_85521427_85521576_85533583_85533881_85543771_85543956_85575130_85575330_85578929_85582108_85585701_85585824_85639373_85639450_85645817_85645955_85655416_85655788_85664562_85664756_85669721_85669831_85682157_85682213_85684740
transcript_67948.known	chr15	+	3765	4	FSM	ENSG00000170776.22	ENST00000560302.5	3765	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	3.68178700572909	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATTGTGTAAGTTGTAT	85376779	True	NA	NA	False	AATAAA	-9	NA	85380639	85536997	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_85380799_85485709_85485754_85521427_85521576_85533583
transcript_67949.nnic	chr15	-	3612	4	NNC	ENSG00000183655.13	novel	3650	3	NA	NA	-33	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	31.2836485510668	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGCCTGCCTTGTGTG	-85792503	True	NA	-5	True	AATAAA	-15	NA	85794958	85759325	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_-_85760238_85760308_85761012_85768016_85769821_85794765
transcript_67951.known	chr15	-	3650	3	FSM	ENSG00000183655.13	ENST00000337975.6	3650	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	4	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGCCTGCCTTGTGTG	-85792470	True	NA	-5	True	AATAAA	-15	NA	85794925	85759325	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_85761012_85768016_85769821_85794765
transcript_67952.known	chr15	-	548	2	FSM	ENSG00000183655.13	ENST00000559131.1	548	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCCTGCCCTGCTGGGG	-85792463	True	NA	NA	False	GGGGCT	-27	NA	85794918	85760616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_85761012_85794765
transcript_67953.nic	chr15	-	3019	2	ISM	ENSG00000183655.13	ENST00000337975.6	3650	3	-33	7669	-33	-6378	5prime_fragment	FALSE	canonical	3	70	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCGCCAACCAGGCATGA	-85792503	True	NA	NA	False	NA	NA	NA	85794958	85766994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_85769821_85794765
transcript_67954.nic	chr15	-	2856	2	ISM	ENSG00000183655.13	ENST00000337975.6	3650	3	-33	7832	-33	-6541	5prime_fragment	FALSE	canonical	3	70	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCAGGCATGGTGGTGC	-85792503	True	NA	NA	False	AATACA	-6	NA	85794958	85767157	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_85769821_85794765
transcript_67961.known	chr15	-	2622	16	FSM	ENSG00000140538.16	ENST00000557856.5	2622	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	8.34425950379461	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGGAAAAAAAAAGAA	-88255702	False	475	NA	False	TATAAA	-30	NA	88256177	87876790	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_87877121_87880269_87880429_87929190_87929435_87933011_87933185_87940622_87940754_88032856_88033046_88126270_88126374_88127161_88127227_88135100_88135398_88135898_88136041_88136466_88136610_88137403_88137562_88147334_88147404_88183417_88183490_88184224_88184300_88255905
transcript_67968.nic	chr15	-	2153	6	NIC	ENSG00000140543.15	novel	2276	5	NA	NA	-12	0	intron_retention	FALSE	canonical	2	10	junction_4	19.0515091265758	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGGTTGGATGACTG	-88545966	True	NA	NA	False	AATAAA	-24	NA	88546693	88512479	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_88513141_88516781_88516974_88527598_88527787_88530622_88531474_88531608_88531716_88546539
transcript_67969.known	chr15	-	2315	6	FSM	ENSG00000140543.15	ENST00000564406.5	2315	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	18.3150211575089	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATGTGGTTGGATGA	-88545926	True	NA	NA	False	AATAAA	-21	NA	88546653	88512482	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_88513141_88516781_88516974_88527598_88527787_88530622_88531716_88536311_88536382_88546539
transcript_67972.known	chr15	-	2276	5	FSM	ENSG00000140543.15	ENST00000268148.13	2276	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	15.9765453086705	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGGTTGGATGACTG	-88545954	True	NA	NA	False	AATAAA	-24	NA	88546681	88512479	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_88513141_88516781_88516974_88527598_88527787_88530622_88531716_88546539
transcript_67973.known	chr15	-	986	4	FSM	ENSG00000259494.2	ENST00000312475.5	986	4	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_2	28.6472802664872	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGTCTCAGCTGATTTG	-88462323	True	NA	-10	True	AATAAA	-15	NA	88467388	88459477	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_88459864_88464702_88464877_88465586_88465774_88467149
transcript_67981.known	chr15	-	1002	2	FSM	ENSG00000259494.2	ENST00000558531.1	1002	2	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTCGAGGTGTAATTTGG	-88462325	True	NA	NA	False	NA	NA	NA	88467390	88465012	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_88465774_88467149
transcript_67982.known	chr15	+	766	5	FSM	ENSG00000181991.16	ENST00000353598.6	766	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	103.151284529084	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATAATTTTGAGATTTT	88462483	True	NA	12	True	AATAAA	-14	NA	88467717	88478259	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_88467783_88467907_88468025_88475109_88475240_88476988_88477055_88477871
transcript_67983.known	chr15	+	458	3	FSM	ENSG00000181991.16	ENST00000560850.1	458	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	104.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAGCATTTACCCTCCCA	88462473	True	NA	35	True	AATAAA	-14	NA	88467707	88472620	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_88467783_88467907_88468025_88472354
transcript_67984.known	chr15	+	3392	6	FSM	ENSG00000181991.16	ENST00000325844.9	3392	6	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	32.7987804651332	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTACTGTCTCTTAATCAT	88462473	True	NA	5	True	AATAAA	-18	NA	88467707	88480776	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_88467783_88467907_88468025_88472626_88472726_88475109_88475240_88476988_88477055_88477871
transcript_67985.known	chr15	+	453	2	FSM	ENSG00000181991.16	ENST00000559125.1	453	2	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATGAGTGAATGTGAGAT	88462443	True	NA	85	True	AGTAAA	-23	NA	88467677	88468258	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_88467783_88467910
transcript_67991.nic	chr15	+	3356	4	NIC	ENSG00000181026.15	novel	3072	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_1	302.269563285636	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAAGTGGCCCTTCCTGT	88610877	True	NA	25	True	AATAAA	-18	NA	88621336	88632281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_88621664_88626145_88626750_88629225_88629427_88630057
transcript_67993.nic	chr15	+	3474	4	NIC	ENSG00000181026.15	novel	3072	4	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	287.732900833781	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAAGTGGCCCTTCCTGT	88610893	True	NA	25	True	AATAAA	-18	NA	88621352	88632281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_88621798_88626145_88626750_88629225_88629427_88630057
transcript_67999.known	chr15	+	3072	4	FSM	ENSG00000181026.15	ENST00000332810.4	3072	4	0	0	0	0	multi-exon	FALSE	canonical	3	629	junction_1	41.0636362518253	4220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAAGTGGCCCTTCCTGT	88610880	True	NA	25	True	AATAAA	-18	NA	88621339	88632281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_88621383_88626145_88626750_88629225_88629427_88630057
transcript_68000.known	chr15	+	1242	2	FSM	ENSG00000181026.15	ENST00000557787.1	1242	2	0	0	0	0	multi-exon	TRUE	canonical	3	629	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACAGGGCTTAAGGGGAAA	88610877	True	NA	NA	False	CATAAA	-2	NA	88621336	88627341	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_88621383_88626145
transcript_68003.known	chr15	+	1583	4	FSM	ENSG00000172183.16	ENST00000306072.10	1583	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	9.84321537348893	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAGCAATTTTTTTTTTT	88638910	True	NA	NA	False	AATAAA	-17	NA	88639015	88656483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_88639077_88639342_88639595_88652109_88652311_88655414
transcript_68004.known	chr15	+	4159	10	FSM	ENSG00000157766.19	ENST00000558207.5	4159	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	1.39664500999739	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAAGGCTTTAGAGCAAT	88803310	True	NA	NA	False	CATAAA	-29	NA	88803473	88851521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_88803810_88836199_88836277_88838662_88839047_88840011_88840187_88841739_88841868_88843354_88843649_88845504_88845883_88847242_88847418_88847910_88848039_88849437
transcript_68018.known	chr15	-	3071	6	FSM	ENSG00000140511.12	ENST00000558770.5	3071	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	84.9164295057205	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCAGCCCTTTTCTGTG	-88893854	True	NA	-10	True	AATAAA	-24	NA	88895531	88877294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_88878257_88878966_88879270_88879417_88880611_88881356_88881726_88887174_88887346_88895458
transcript_68020.known	chr15	-	1547	6	FSM	ENSG00000140511.12	ENST00000562889.5	1547	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	87.9786337697966	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTGTAAAGCAAACAGAAC	-88893920	True	NA	NA	False	TTTAAA	-27	NA	88895597	88877830	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_88878257_88878966_88879270_88881356_88881726_88887174_88887346_88892973_88893113_88895458
transcript_68023.known	chr15	-	1892	5	FSM	ENSG00000140511.12	ENST00000359595.8	1892	5	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_4	21.016362672927	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCAGCCCTTTTCTGTGT	-88893867	True	NA	-9	True	AATAAA	-25	NA	88895544	88877293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_88878257_88878966_88879270_88881356_88881726_88887174_88887346_88895458
transcript_68027.known	chr15	-	807	3	FSM	ENSG00000140511.12	ENST00000563808.1	807	3	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_2	11	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACGACAGAGCTGGGGTC	-88895503	False	NA	NA	False	NA	NA	NA	88895513	88881144	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_88881726_88887174_88887346_88895458
transcript_68092.known	chr15	-	1989	9	FSM	ENSG00000140545.15	ENST00000558018.5	1989	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_8	418.905941113277	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGGTGTGGTTCGTTAT	-88896557	True	NA	-5	True	AATATA	-20	NA	88913379	88898682	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_88899533_88899655_88899812_88901550_88901736_88905756_88905902_88906625_88906779_88907194_88907377_88909791_88909924_88912123_88912177_88913246
transcript_68102.known	chr15	-	1689	9	FSM	ENSG00000140545.15	ENST00000566497.5	1689	9	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_1	327.769354882362	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCCAAAATATATTTATCT	-88896559	True	NA	-37	True	NA	NA	NA	88913381	88898714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_88899158_88899374_88899533_88899655_88899812_88901550_88901736_88905756_88905902_88906625_88906779_88907194_88907377_88909791_88909924_88913246
transcript_68122.known	chr15	-	1936	8	FSM	ENSG00000140545.15	ENST00000268150.13	1936	8	0	0	0	0	multi-exon	FALSE	canonical	3	918	junction_3	48.0616101202086	4145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGGTGTGGTTCGTTAT	-88896557	True	NA	-5	True	AATATA	-20	NA	88913379	88898682	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_88899533_88899655_88899812_88901550_88901736_88905756_88905902_88906625_88906779_88907194_88907377_88909791_88909924_88913246
transcript_68149.known	chr15	-	1172	7	FSM	ENSG00000140545.15	ENST00000542878.5	1172	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_6	367.996376793758	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTGGGGACTGGGGAAG	-88896557	True	NA	NA	False	TTTAAA	-8	NA	88913379	88899314	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_88899533_88899655_88899812_88901550_88901736_88905756_88905902_88906625_88906779_88907194_88907377_88913246
transcript_68166.known	chr15	-	1752	7	FSM	ENSG00000140545.15	ENST00000268151.11	1752	7	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	336.038894904874	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAAATATATTTATCTTC	-88896559	True	NA	-35	True	NA	NA	NA	88913381	88898712	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_88899533_88901550_88901736_88905756_88905902_88906625_88906779_88907194_88907377_88909791_88909924_88913246
transcript_6817.known	chr1	-	2171	13	FSM	ENSG00000142687.18	ENST00000440579.5	2171	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_12	70.3089906531637	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAGGTACCTCTCTGCC	-35554379	False	NA	-7	True	NA	NA	NA	35554987	35451634	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_35451777_35453556_35453690_35454361_35454486_35456012_35456242_35460304_35460438_35462620_35462714_35466607_35466696_35470862_35470961_35474804_35474907_35478965_35479213_35506611_35507136_35554349_35554520_35554899
transcript_6818.nic	chr1	-	2301	13	ISM	ENSG00000142687.18	ENST00000325722.8	4777	21	-21	18143	-19	0	5prime_fragment	FALSE	canonical	3	185	junction_12	29.2293374311952	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAGGTACCTCTCTGCC	-35556816	False	NA	-7	True	NA	NA	NA	35557424	35451634	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_35451777_35453556_35453690_35454361_35454486_35456012_35456242_35460304_35460438_35462620_35462714_35466607_35466696_35470862_35470961_35474804_35474907_35478965_35479213_35506611_35507136_35554349_35554520_35557206
transcript_68199.nic	chr15	-	3083	5	ISM	ENSG00000140545.15	ENST00000558029.5	849	6	-67	1918	-48	321	5prime_fragment	FALSE	canonical	3	955	junction_3	35.5132017706092	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGACTGAAAGCCCCAGC	-88896607	True	NA	NA	False	AAAAAG	-4	NA	88913429	88903468	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_88905902_88906625_88906779_88907194_88907377_88909791_88909924_88913246
transcript_68208.known	chr15	+	8424	11	FSM	ENSG00000140526.18	ENST00000352732.10	8424	11	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_6	5.76541412215983	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGCTATGTGTCCTTTG	89086248	True	NA	11	True	AATAAA	-14	NA	89088455	89202355	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_89088564_89113724_89113825_89116321_89116522_89151676_89151853_89155366_89155535_89175811_89175996_89185423_89185517_89188192_89188304_89191079_89191150_89193234_89193320_89195226
transcript_68225.nic	chr15	+	4149	38	NIC	ENSG00000140525.19	novel	4733	38	NA	NA	2	0	combination_of_known_junctions	TRUE	canonical	3	198	junction_1	78.4955973417955	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTGGGGCTTCTGCTTC	89236481	True	NA	22	True	AATAAA	-22	NA	89243946	89316481	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_89244068_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521_89264608_89268398_89268526_89273376_89273470_89274167_89274305_89276710_89276892_89278686_89278775_89281169_89281301_89281764_89281836_89283135_89283251_89285095_89285219_89290212_89290282_89291612_89291715_89292687_89292865_89292941_89293064_89293832_89293998_89294914_89295095_89299799_89299967_89300299_89300386_89301325_89301443_89303863_89303916_89305114_89305243_89305340_89305410_89305604_89305699_89306006_89306195_89307475_89307530_89307612_89307673_89312903_89312973_89314611_89314708_89315281_89315390_89316396
transcript_68226.nic	chr15	+	4796	38	NIC	ENSG00000140525.19	novel	4733	38	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	198	junction_1	78.4955973417955	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTCTGTGGTTGAAGT	89236481	True	NA	16	True	AATAAA	-13	NA	89243946	89317128	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_89244068_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521_89264608_89268398_89268526_89273376_89273470_89274167_89274305_89276710_89276892_89278686_89278775_89281169_89281301_89281764_89281836_89283135_89283251_89285095_89285219_89290212_89290282_89291612_89291715_89292687_89292865_89292941_89293064_89293832_89293998_89294914_89295095_89299799_89299967_89300299_89300386_89301325_89301443_89303863_89303916_89305114_89305243_89305340_89305410_89305604_89305699_89306006_89306195_89307475_89307530_89307612_89307673_89312903_89312973_89314611_89314708_89315281_89315390_89316396
transcript_68230.known	chr15	+	4733	38	FSM	ENSG00000140525.19	ENST00000310775.12	4733	38	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_1	75.7324401004262	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTGTGGTTGAAGTAGG	89236513	True	NA	19	True	AATAAA	-16	NA	89243978	89317131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_89244034_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521_89264608_89268398_89268526_89273376_89273470_89274167_89274305_89276710_89276892_89278686_89278775_89281169_89281301_89281764_89281836_89283135_89283251_89285095_89285219_89290212_89290282_89291612_89291715_89292687_89292865_89292941_89293064_89293832_89293998_89294914_89295095_89299799_89299967_89300299_89300386_89301325_89301443_89303863_89303916_89305114_89305243_89305340_89305410_89305604_89305699_89306006_89306195_89307475_89307530_89307612_89307673_89312903_89312973_89314611_89314708_89315281_89315390_89316396
transcript_68240.known	chr15	+	4713	37	FSM	ENSG00000140525.19	ENST00000300027.12	4713	37	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_23	109.028609338655	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCTGAGTCAAGAGTGGA	89236483	True	NA	NA	False	TATAAA	-20	NA	89243948	89317261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_89244034_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521_89264608_89268398_89268526_89273376_89273470_89274167_89274305_89276710_89276892_89278686_89278775_89281169_89281301_89281764_89281836_89283135_89283251_89285095_89285219_89290212_89290282_89291612_89291715_89292687_89292865_89292941_89293064_89293832_89293998_89299799_89299967_89300299_89300386_89301325_89301443_89303863_89303916_89305114_89305243_89305340_89305410_89305604_89305699_89306006_89306195_89307475_89307530_89307612_89307673_89312903_89312973_89314611_89314708_89315281_89315390_89316396
transcript_68262.nic	chr15	-	4596	24	NIC	ENSG00000140521.17	novel	4487	23	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_3	78.2052217615617	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCTATCTTCTCATCAAA	-89334857	False	NA	-17	True	AATAAA	-16	NA	89334871	89316319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_89316828_89317375_89317537_89317938_89318038_89318540_89318750_89318930_89319100_89319227_89319351_89320765_89321013_89321124_89321261_89321735_89321854_89321961_89322016_89322741_89322903_89323403_89323512_89323814_89323902_89324106_89324228_89325449_89325687_89326611_89326739_89326911_89327064_89327166_89327350_89328455_89328536_89328684_89328832_89328942_89329111_89330080_89330277_89333095_89333914_89334684
transcript_68275.known	chr15	-	4487	23	FSM	ENSG00000140521.17	ENST00000442287.6	4487	23	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_22	40.603835873022	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCTATCTTCTCATCAAA	-89330582	True	NA	-17	True	AATAAA	-16	NA	89334861	89316319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_89316828_89317375_89317537_89318540_89318750_89318930_89319100_89319227_89319351_89320765_89321013_89321124_89321261_89321735_89321854_89321961_89322016_89322741_89322903_89323403_89323512_89323814_89323902_89324106_89324228_89325449_89325687_89326611_89326739_89326911_89327064_89327166_89327350_89328455_89328536_89328684_89328832_89328942_89329111_89330080_89330277_89333095_89333914_89334684
transcript_6828.known	chr1	-	570	3	FSM	ENSG00000142687.18	ENST00000476329.1	570	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	14.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTTCTGGCAATAATTCA	-35556995	True	NA	NA	False	AATGAA	-2	NA	35557603	35533095	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_35533442_35554349_35554520_35557549
transcript_68304.known	chr15	+	584	6	FSM	ENSG00000140525.19	ENST00000567891.5	584	6	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_1	144.16934486915	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGTTGATTAACACCCTG	89236509	True	NA	NA	False	NA	NA	NA	89243974	89261847	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_89244068_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820
transcript_68305.known	chr15	+	1109	1	FSM	ENSG00000261441.1	ENST00000569473.1	1109	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTTTTTTTTTTTTT	89335026	True	NA	NA	False	AATACA	-17	NA	89335052	89336161	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_89335100_89336200
transcript_68306.known	chr15	+	2759	5	FSM	ENSG00000255571.9	ENST00000558754.6	2759	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	0.433012701892219	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAGGCTTAACTTCTGTC	NA	False	NA	NA	False	NA	NA	NA	89378562	89396795	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_89379270_89387816_89387882_89388500_89388582_89389344_89389483_89395027
transcript_68309.known	chr15	-	1952	11	FSM	ENSG00000140519.14	ENST00000268122.9	1952	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.26885775404495	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGAATGCTCCAATGG	-89496567	True	NA	NA	False	AATAAA	-24	NA	89496583	89471406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_89471856_89472710_89472864_89476754_89476829_89477081_89477207_89477516_89477654_89477836_89477975_89479321_89479489_89480260_89480409_89483066_89483218_89486798_89486986_89496360
transcript_68310.known	chr15	+	6656	22	FSM	ENSG00000140534.14	ENST00000560985.5	6656	22	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	20.9522727269932	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATCCTAAAGTCTCCCAG	89570969	False	NA	2	True	ATTAAA	-10	NA	89575586	89628012	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_89576241_89582685_89582966_89584288_89584528_89585707_89585943_89592046_89592177_89594414_89594555_89595392_89595612_89599323_89599476_89600584_89600686_89601297_89601392_89601488_89601569_89601736_89601977_89602795_89602893_89606767_89606826_89608802_89608950_89616404_89616496_89618151_89618211_89619707_89619843_89621392_89621551_89623622_89625787_89625935_89626062_89626955
transcript_68314.known	chr15	-	4567	19	FSM	ENSG00000166813.16	ENST00000394412.8	4567	19	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_18	22.366269246345	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGGGAAGTTTTCACTT	-89653794	True	NA	-8	True	AATAAA	-19	NA	89655467	89627976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_89628787_89628975_89629123_89629374_89629574_89630286_89630494_89631494_89631711_89632819_89632997_89633140_89633267_89633685_89633884_89642202_89642406_89645012_89645166_89645335_89645452_89645892_89646027_89646829_89647058_89647595_89647713_89648254_89648775_89648973_89649368_89649740_89649942_89652602_89652955_89655398
transcript_6832.nnic	chr1	+	3540	9	NNC	ENSG00000020129.16	novel	3433	8	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_5	104.701883340272	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGAAGCCTCCTGCGTGG	35553073	True	NA	13	True	AATAAA	-13	NA	35557766	35566772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_35557884_35558155_35558224_35559106_35559248_35560325_35561295_35562391_35562634_35562791_35562881_35563201_35563427_35563766_35563910_35565226
transcript_68324.nic	chr15	+	1811	6	ISM	ENSG00000140534.14	ENST00000268138.12	6788	22	-13	33470	-13	-33459	5prime_fragment	FALSE	canonical	3	44	junction_2	7.70973410695855	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTATGTACCTAGAAAGGCT	89570838	True	NA	NA	False	AAAAAG	-4	NA	89575455	89594553	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_89576241_89582685_89582966_89584285_89584528_89585707_89585943_89592046_89592177_89594414
transcript_68325.nic	chr15	-	2300	2	ISM	ENSG00000166813.16	ENST00000445906.1	1375	5	-34	2239	-18	-2239	5prime_fragment	FALSE	canonical	3	34	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAACTTTTTAATGGCTAC	NA	False	NA	NA	False	NA	NA	NA	89655485	89650741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_89652955_89655398
transcript_68329.known	chr15	-	2708	3	FSM	ENSG00000166821.9	ENST00000300056.8	2708	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	5.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGTGTCTGTGAGTG	-89690513	True	NA	-3	True	AATAAA	-14	NA	89690754	89681534	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_89683949_89686430_89686547_89690576
transcript_68331.known	chr15	+	1886	3	FSM	ENSG00000140527.15	ENST00000558000.1	1886	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATGTTTAATGGAAAAAC	89690830	False	NA	NA	False	AATAAA	-18	NA	89690843	89704478	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_89690858_89701706_89702050_89702949
transcript_68332.known	chr15	-	2369	2	FSM	ENSG00000166823.6	ENST00000300057.5	1094	2	-61	-1214	-61	1214	multi-exon	FALSE	canonical	3	7	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTTGTGTCTGGCTTCT	NA	False	NA	NA	False	TATAAA	-18	NA	89751310	89748660	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_89750228_89750508
transcript_68333.known	chr15	+	1640	2	FSM	ENSG00000188095.6	ENST00000341735.5	1640	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTGGCCTTGTTTTT	NA	False	NA	NA	False	AAAAAG	-26	NA	89776331	89778754	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_89777282_89778064
transcript_68334.known	chr15	-	3662	21	FSM	ENSG00000166825.15	ENST00000300060.7	3662	21	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_20	3.91503512117069	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGACTCATTACTAAACT	-89814803	True	NA	-2	True	AATAAA	-15	NA	89814852	89784894	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_89785502_89790459_89790542_89790952_89791094_89792159_89792328_89792451_89792563_89793034_89793127_89797574_89797723_89799259_89799316_89799425_89799560_89801110_89801188_89801434_89801608_89803238_89803305_89803441_89803508_89803646_89803791_89803888_89804003_89804252_89804408_89804490_89804618_89805077_89805218_89805320_89805464_89805969_89806807_89814771
transcript_68336.known	chr15	-	2439	10	FSM	ENSG00000250021.7	ENST00000398333.7	2439	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	226.223149965354	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAAGGTTTGTTGCTGTG	-89912098	True	NA	-11	True	AATACA	-15	NA	89912882	89834307	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_89835644_89837614_89837723_89871474_89871547_89888520_89888633_89889048_89889141_89903215_89903380_89903776_89903984_89908279_89908413_89910743_89910820_89912743
transcript_68352.known	chr15	-	1262	7	FSM	ENSG00000157823.17	ENST00000423566.6	1262	7	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_4	213.713723367395	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAACCAGAGTCACCCGC	-89888388	True	NA	NA	False	NA	NA	NA	89893977	89834981	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_89835644_89837614_89837723_89871474_89871547_89877305_89877425_89888520_89888633_89889048_89889141_89893880
transcript_68353.known	chr15	-	738	7	FSM	ENSG00000157823.17	ENST00000558011.5	738	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	207.380018859634	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATTTTGAGCCTTAGAAG	-89888405	True	NA	NA	False	NA	NA	NA	89893994	89835439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_89835644_89837614_89837723_89871474_89871547_89878264_89878301_89888520_89888633_89889048_89889141_89893880
transcript_68358.known	chr15	-	578	6	FSM	ENSG00000157823.17	ENST00000558806.5	578	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	180.590143695607	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTGCCAGAGATTCCTC	-89888439	True	NA	NA	False	AAAACA	-2	NA	89894028	89835593	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_89835644_89837614_89837723_89871474_89871547_89888520_89888633_89889048_89889137_89893880
transcript_68362.known	chr15	-	7587	6	FSM	ENSG00000242498.8	ENST00000357484.10	7587	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	4.88262224629348	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTGAGTCTAATGTTTTAT	-89912168	True	NA	NA	False	CATAAA	-16	NA	89912952	89895005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_89901804_89903215_89903380_89903776_89903984_89908279_89908413_89910743_89910820_89912743
transcript_68373.known	chr15	+	4676	5	FSM	ENSG00000140548.10	ENST00000268154.9	4676	5	0	0	0	0	multi-exon	TRUE	canonical	3	69	junction_1	1.22474487139159	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGTGACTGCAAATGCT	90001241	True	NA	14	True	AATAAA	-14	NA	90001323	90082191	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_90001615_90067109_90068596_90073070_90073263_90074115_90074291_90079659
transcript_68375.known	chr15	-	2658	11	FSM	ENSG00000182054.10	ENST00000330062.8	2658	11	0	0	0	0	multi-exon	FALSE	canonical	3	408	junction_8	45.1819654286973	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGTCCTCTGCATAGTA	-90099104	True	NA	-15	True	AATAAA	-30	NA	90102468	90083044	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_90084354_90084815_90084909_90085000_90085099_90085274_90085388_90087111_90087264_90087438_90087576_90088358_90088503_90088586_90088748_90090478_90090645_90091552_90091645_90102275
transcript_68387.known	chr15	+	3781	15	FSM	ENSG00000185033.15	ENST00000332496.10	3781	15	0	0	0	0	multi-exon	TRUE	canonical	3	26	junction_1	50.7892805659636	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCTTCAAGGACAGTTGC	90184266	True	NA	42	True	AATAAA	-32	NA	90184962	90229670	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_90185082_90201457_90201736_90217438_90217603_90217766_90217830_90219792_90219892_90220981_90221094_90221366_90221481_90221613_90221766_90223558_90223741_90223837_90223989_90224967_90225179_90225281_90225398_90225660_90225828_90227556_90227643_90227903
transcript_6839.known	chr1	+	3433	8	FSM	ENSG00000020129.16	ENST00000356090.8	3433	8	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_2	30.5774359918672	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGCGTGGTCTGCCC	35553098	True	NA	20	True	AATAAA	-20	NA	35557791	35566779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_35557884_35558155_35558224_35559106_35559248_35560325_35561295_35562391_35562634_35563201_35563427_35563766_35563910_35565226
transcript_68391.known	chr15	+	3807	14	FSM	ENSG00000185033.15	ENST00000411539.7	3780	14	-11	-16	-11	-3	multi-exon	FALSE	canonical	3	170	junction_4	21.7162987899894	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGGACAGTTGCTTTTTG	90199005	True	NA	48	True	AATAAA	-38	NA	90201318	90229676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_90201736_90217438_90217603_90217766_90217830_90219792_90219892_90220981_90221094_90221366_90221481_90221613_90221766_90223558_90223741_90223837_90223989_90224967_90225179_90225281_90225398_90225660_90225828_90227556_90227643_90227903
transcript_68409.known	chr15	-	1141	7	FSM	ENSG00000185043.12	ENST00000328649.11	1141	7	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_2	44.0293462741991	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATCTGAAGAATTAAAAAC	-90228515	True	NA	-2	True	AGTAAA	-16	NA	90233941	90229974	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_90230506_90230933_90231023_90231094_90231214_90231356_90231508_90232218_90232328_90233668_90233704_90233834
transcript_68410.nic	chr15	-	951	7	NIC	ENSG00000185043.12	novel	906	8	NA	NA	-63	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	187.588201476887	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTATGTGTGACATGAGAT	NA	False	NA	-38	True	AATAAA	-16	NA	90234110	90230249	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_90230506_90230933_90231023_90231094_90231214_90231356_90231508_90232218_90232328_90233668_90233704_90233918
transcript_68414.nic	chr15	-	2236	6	NIC	ENSG00000185043.12	novel	1096	7	NA	NA	-10	0	intron_retention	FALSE	canonical	3	411	junction_2	45.5280133544173	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTATGTGTGACATGAGAT	-90228544	True	NA	-38	True	AATAAA	-16	NA	90233970	90230249	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_90230506_90230933_90231023_90231094_90231214_90231356_90231508_90232218_90233704_90233834
transcript_68423.nic	chr15	-	2916	5	NIC	ENSG00000185043.12	novel	1096	7	NA	NA	2	0	intron_retention	FALSE	canonical	3	411	junction_2	35.6467039149484	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTATGTGTGACATGAGAT	-90228513	True	NA	-38	True	AATAAA	-16	NA	90233939	90230249	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_90230506_90230933_90231023_90231094_90231214_90231356_90233704_90233834
transcript_6843.nic	chr1	+	3689	8	NIC	ENSG00000020129.16	novel	3433	8	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	95.1447876252026	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGAAGCCTCCTGCGTGG	35553096	True	NA	13	True	AATAAA	-13	NA	35557789	35566772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_35557884_35558155_35558485_35559106_35559248_35560325_35561295_35562391_35562634_35563201_35563427_35563766_35563910_35565226
transcript_68430.known	chr15	+	1340	3	FSM	ENSG00000182768.9	ENST00000379095.5	1340	3	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_1	713.5	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTTTGGTGCTCTTTG	90245755	True	NA	11	True	AATAAA	-17	NA	90265671	90272211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_90265877_90266287_90266399_90271187
transcript_68435.known	chr15	+	2784	2	FSM	ENSG00000182768.9	ENST00000331497.3	2784	2	0	0	0	0	multi-exon	FALSE	canonical	3	1710	junction_1	0	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTTATCAATTATTATTG	90245742	True	NA	NA	False	ATTAAA	-16	NA	90265658	90273231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_90266399_90271187
transcript_68438.known	chr15	+	7205	38	FSM	ENSG00000140575.13	ENST00000268182.10	7205	38	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_19	44.5955118660781	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTGTTTTTCTCAGTT	90377113	True	NA	28	True	AATAAA	-15	NA	90388241	90502239	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_90388397_90390773_90390874_90426109_90426267_90429588_90429667_90433718_90433796_90439331_90439400_90440501_90440616_90441505_90441685_90443393_90443479_90448572_90448737_90449558_90449644_90452774_90452939_90453131_90453293_90454427_90454553_90456151_90456316_90466000_90466092_90466268_90466437_90467449_90467593_90472839_90473011_90473714_90473799_90473895_90473968_90474063_90474134_90474484_90474694_90476662_90476819_90477066_90477231_90477664_90477890_90481959_90482101_90482196_90482282_90483360_90483594_90484219_90484353_90486029_90486133_90486953_90487090_90487494_90487583_90491332_90491546_90492544_90492712_90494712_90494836_90497231_90497341_90499994
transcript_6844.nic	chr1	+	4244	8	NIC	ENSG00000020129.16	novel	3433	8	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	2	19	junction_2	88.7909721463499	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGAAGCCTCCTGCGTGG	35557368	True	NA	13	True	AATAAA	-13	NA	35557435	35566772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_35557884_35558155_35558686_35559106_35559248_35560325_35561295_35562391_35562634_35563201_35563427_35563766_35563910_35565226
transcript_68441.nic	chr15	+	4836	36	ISM	ENSG00000140575.13	ENST00000268182.10	7205	38	-52	7471	-52	0	5prime_fragment	FALSE	canonical	3	285	junction_19	40.425855537247	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATACAGCAGCAAGACTA	90377061	True	NA	NA	False	AAAAAG	-44	NA	90388189	90494768	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_90388397_90390773_90390874_90426109_90426267_90429588_90429667_90433718_90433796_90439331_90439400_90440501_90440616_90441505_90441685_90443393_90443479_90448572_90448737_90449558_90449644_90452774_90452939_90453131_90453293_90454427_90454553_90456151_90456316_90466000_90466092_90466268_90466437_90467449_90467593_90472839_90473011_90473714_90473799_90473895_90473968_90474063_90474134_90474484_90474694_90476662_90476819_90477066_90477231_90477664_90477890_90481959_90482101_90482196_90482282_90483360_90483594_90484219_90484353_90486029_90486133_90486953_90487090_90487494_90487583_90491332_90491546_90492544_90492712_90494712
transcript_68443.nic	chr15	+	4780	35	ISM	ENSG00000140575.13	ENST00000268182.10	7205	38	-52	9528	-52	95	5prime_fragment	FALSE	canonical	3	285	junction_19	37.0200544173796	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTATTTTTTCTTTTTA	90377061	True	NA	NA	False	TATAAA	-45	NA	90388189	90492711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_90388397_90390773_90390874_90426109_90426267_90429588_90429667_90433718_90433796_90439331_90439400_90440501_90440616_90441505_90441685_90443393_90443479_90448572_90448737_90449558_90449644_90452774_90452939_90453131_90453293_90454427_90454553_90456151_90456316_90466000_90466092_90466268_90466437_90467449_90467593_90472839_90473011_90473714_90473799_90473895_90473968_90474063_90474134_90474484_90474694_90476662_90476819_90477066_90477231_90477664_90477890_90481959_90482101_90482196_90482282_90483360_90483594_90484219_90484353_90486029_90486133_90486953_90487090_90487494_90487583_90491332_90491546_90492544
transcript_68444.nic	chr15	+	4471	34	ISM	ENSG00000140575.13	ENST00000268182.10	7205	38	-52	10836	-52	-217	5prime_fragment	TRUE	canonical	3	285	junction_19	31.4401788876089	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCAAAATCTGTAAAGGAAG	90377061	True	NA	9	True	AAAACA	-18	NA	90388189	90491403	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_90388397_90390773_90390874_90426109_90426267_90429588_90429667_90433718_90433796_90439331_90439400_90440501_90440616_90441505_90441685_90443393_90443479_90448572_90448737_90449558_90449644_90452774_90452939_90453131_90453293_90454427_90454553_90456151_90456316_90466000_90466092_90466268_90466437_90467449_90467593_90472839_90473011_90473714_90473799_90473895_90473968_90474063_90474134_90474484_90474694_90476662_90476819_90477066_90477231_90477664_90477890_90481959_90482101_90482196_90482282_90483360_90483594_90484219_90484353_90486029_90486133_90486953_90487090_90487494_90487583_90491332
transcript_68446.nic	chr15	+	2974	24	ISM	ENSG00000140575.13	ENST00000633485.1	5863	39	-57	24154	-52	-403	5prime_fragment	FALSE	canonical	3	285	junction_19	26.2657640126504	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGAACAGTTGTCTGATA	90377061	True	NA	NA	False	AGTAAA	-18	NA	90388189	90476700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_90388397_90390773_90390874_90426109_90426267_90429588_90429667_90433718_90433796_90439331_90439400_90440501_90440616_90441505_90441685_90443393_90443479_90448572_90448737_90449558_90449644_90452774_90452939_90453131_90453293_90454427_90454553_90456151_90456316_90466000_90466092_90466268_90466437_90467449_90467593_90472839_90473011_90473714_90473799_90473895_90473968_90474063_90474134_90474484_90474694_90476662
transcript_68448.nic	chr15	+	2920	23	ISM	ENSG00000140575.13	ENST00000633485.1	5863	39	-57	26177	-52	438	5prime_fragment	FALSE	canonical	3	285	junction_19	26.3148451331214	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATTACGTTGCAGGTAT	90377061	True	NA	NA	False	NA	NA	NA	90388189	90474677	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_90388397_90390773_90390874_90426109_90426267_90429588_90429667_90433718_90433796_90439331_90439400_90440501_90440616_90441505_90441685_90443393_90443479_90448572_90448737_90449558_90449644_90452774_90452939_90453131_90453293_90454427_90454553_90456151_90456316_90466000_90466092_90466268_90466437_90467449_90467593_90472839_90473011_90473714_90473799_90473895_90473968_90474063_90474134_90474484
transcript_68454.nic	chr15	+	2177	17	ISM	ENSG00000140575.13	ENST00000633485.1	5863	39	-57	34428	-52	-6652	5prime_fragment	FALSE	canonical	3	287	junction_3	25.8081110070071	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCAGTAGGTGAGTTCTG	90377061	True	NA	NA	False	AAGAAA	-4	NA	90388189	90466426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_90388397_90390773_90390874_90426109_90426267_90429588_90429667_90433718_90433796_90439331_90439400_90440501_90440616_90441505_90441685_90443393_90443479_90448572_90448737_90449558_90449644_90452774_90452939_90453131_90453293_90454427_90454553_90456151_90456316_90466000_90466092_90466268
transcript_68457.known	chr15	+	1201	2	FSM	ENSG00000140575.13	ENST00000559809.2	1201	2	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGTGTGTGTATGTGTG	90377226	True	NA	9	True	AATAAA	-28	NA	90388354	90391932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_90388397_90390773
transcript_68460.known	chr15	+	5214	15	FSM	ENSG00000140577.17	ENST00000268184.11	5214	15	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_14	4.28868944350802	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGGTGTTTTTCTTCA	90529491	True	NA	28	True	ATTAAA	-27	NA	90529922	90645345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_90530204_90540038_90540138_90593635_90593756_90602323_90602386_90604384_90604448_90607377_90607479_90614452_90614489_90617882_90617969_90619740_90619791_90625775_90625994_90629233_90629533_90638445_90638647_90638734_90638816_90641096_90641200_90641931
transcript_68462.known	chr15	+	5209	15	FSM	ENSG00000140577.17	ENST00000420329.6	5209	15	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_14	4.62303460722412	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGGTGTTTTTCTTCA	90529493	True	NA	28	True	ATTAAA	-27	NA	90529924	90645345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_90530204_90540038_90540138_90593635_90593756_90602323_90602386_90604384_90604448_90607377_90607479_90614452_90614489_90617882_90617969_90619740_90619791_90625775_90625994_90629233_90629533_90638445_90638647_90638734_90638816_90641096_90641200_90641934
transcript_68465.nic	chr15	+	2365	3	ISM	ENSG00000140577.17	ENST00000691029.1	3631	17	-55	49754	-43	0	5prime_fragment	FALSE	canonical	3	21	junction_2	3.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAATGTATATTTTTTCAG	90529448	True	NA	NA	False	NA	NA	NA	90529879	90595577	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_90530204_90540038_90540138_90593635
transcript_68473.known	chr15	+	5240	22	FSM	ENSG00000197299.13	ENST00000355112.8	5240	22	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_9	27.5337764125703	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGACCATTCTTTTGCC	90711418	True	NA	NA	False	AATAAA	-16	NA	90717345	90816166	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_90717441_90747388_90747491_90749366_90750068_90751786_90751947_90754810_90754939_90760146_90760280_90760593_90761256_90762965_90763158_90765295_90765415_90766909_90767024_90769132_90769232_90769437_90769587_90782821_90782929_90784920_90785082_90790648_90790845_90794166_90794358_90798189_90798338_90803520_90803721_90804166_90804360_90809136_90809260_90811204_90811407_90815101
transcript_68482.nic	chr15	+	2386	10	ISM	ENSG00000197299.13	ENST00000681142.1	4270	22	-36	44972	-19	-2197	5prime_fragment	FALSE	canonical	3	181	junction_9	15.6497150212684	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCCAATCATAAAACTTCT	90711399	True	NA	NA	False	NA	NA	NA	90717326	90766984	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_90717441_90747388_90747491_90749366_90750068_90751786_90751947_90754810_90754939_90760146_90760280_90760593_90761256_90762965_90763158_90765295_90765415_90766909
transcript_68483.nic	chr15	+	1662	7	ISM	ENSG00000197299.13	ENST00000681142.1	4270	22	-36	51039	-19	95	5prime_fragment	FALSE	canonical	3	195	junction_6	9.23158828275082	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGCTCTTATTTCCCAG	90711399	True	NA	NA	False	NA	NA	NA	90717326	90760917	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_90717441_90747388_90747491_90749366_90750068_90751786_90751947_90754810_90754939_90760146_90760280_90760593
transcript_68487.nnic	chr15	+	4207	16	NNC	ENSG00000140564.13	novel	4189	15	NA	NA	-472	0	intron_retention	FALSE	canonical	2	3	junction_1	49.3690861437263	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGTCTCCAGTGTGGTA	90870907	True	NA	10	True	ATTAAA	-22	NA	90871066	90883457	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_+_90871151_90875581_90875918_90876254_90876354_90876461_90876558_90876895_90877025_90877134_90877212_90877526_90877616_90878131_90878305_90878763_90878977_90879443_90879545_90879670_90879775_90879866_90879985_90880093_90880274_90880690_90880816_90880929_90881041_90881285
transcript_68488.known	chr15	+	4191	16	FSM	ENSG00000140564.13	ENST00000610579.4	4191	16	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	27.8770315652311	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCCAGTGTGGTAC	90871452	True	NA	11	True	ATTAAA	-23	NA	90871538	90883458	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_90871606_90875581_90875918_90876254_90876354_90876461_90876558_90876895_90877025_90877134_90877212_90877526_90877616_90878131_90878305_90878763_90878977_90879443_90879545_90879670_90879775_90879866_90879985_90880093_90880274_90880690_90880816_90880929_90881041_90881285
transcript_68489.known	chr15	+	4287	16	FSM	ENSG00000140564.13	ENST00000680053.1	4287	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	49.6060032209364	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAAAGTCCTCCAAGGGG	90872146	True	NA	NA	False	NA	NA	NA	90872169	90883564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_90872227_90875581_90875918_90876254_90876354_90876461_90876558_90876895_90877025_90877134_90877212_90877526_90877616_90878131_90878305_90878763_90878977_90879443_90879545_90879670_90879775_90879866_90879985_90880093_90880274_90880690_90880816_90880929_90881041_90881285
transcript_68492.known	chr15	+	4247	16	FSM	ENSG00000140564.13	ENST00000268171.8	4247	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	50.0802023425092	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGTCTCCAGTGTGGTA	90868576	True	NA	10	True	ATTAAA	-22	NA	90868587	90883457	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_90868712_90875581_90875918_90876254_90876354_90876461_90876558_90876895_90877025_90877134_90877212_90877526_90877616_90878131_90878305_90878763_90878977_90879443_90879545_90879670_90879775_90879866_90879985_90880093_90880274_90880690_90880816_90880929_90881041_90881285
transcript_68495.known	chr15	+	2737	19	FSM	ENSG00000182511.12	ENST00000328850.8	2737	19	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_11	10.6418983268964	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCCTGGCATGTGCACTC	90883924	True	NA	7	True	AATAAA	-20	NA	90884503	90895776	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_90884545_90885036_90885259_90885411_90885586_90886960_90887058_90887186_90887371_90889305_90889444_90889516_90889637_90889839_90889963_90890091_90890279_90890400_90890485_90890981_90891192_90891553_90891677_90892057_90892112_90892706_90892826_90893099_90893195_90893290_90893415_90893653_90893812_90893935_90894059_90895415
transcript_68502.nic	chr15	+	2686	18	NIC	ENSG00000182511.12	novel	2737	19	NA	NA	-102	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_10	8.40497463505494	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCCTGGCATGTGCACTC	90884330	False	NA	7	True	AATAAA	-20	NA	90884344	90895776	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_90884545_90885036_90885259_90885411_90885586_90886960_90887058_90887186_90887371_90889305_90889444_90889516_90889637_90889839_90889963_90890091_90890279_90890400_90890485_90891553_90891677_90892057_90892112_90892706_90892826_90893099_90893195_90893290_90893415_90893653_90893812_90893935_90894059_90895415
transcript_68507.nic	chr15	+	2984	18	NIC	ENSG00000182511.12	novel	2737	19	NA	NA	-364	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_2	13.4450052469296	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCCTGGCATGTGCACTC	90884069	False	NA	7	True	AATAAA	-20	NA	90884082	90895776	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_90884545_90885036_90885259_90886960_90887058_90887186_90887371_90889305_90889444_90889516_90889637_90889839_90889963_90890091_90890279_90890400_90890485_90890981_90891192_90891553_90891677_90892057_90892112_90892706_90892826_90893099_90893195_90893290_90893415_90893653_90893812_90893935_90894059_90895415
transcript_68513.known	chr15	+	2327	17	FSM	ENSG00000182511.12	ENST00000414248.6	2327	17	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	12.1243556529821	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCCGTGTCCTCTCTGTGT	90883867	True	NA	-76	True	NA	NA	NA	90884446	90895693	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_90884545_90885036_90885259_90886960_90887058_90887186_90887371_90889305_90889444_90889516_90889637_90889839_90889963_90890091_90890279_90890400_90890485_90891553_90891677_90892057_90892112_90892706_90892826_90893099_90893195_90893290_90893415_90893653_90893812_90893935_90894059_90895415
transcript_6852.known	chr1	+	3698	7	FSM	ENSG00000020129.16	ENST00000373243.7	3698	7	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_1	29.4604254325471	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGCGTGGTCTGCCC	35553105	True	NA	20	True	AATAAA	-20	NA	35557798	35566779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_35558224_35559106_35559248_35560325_35561295_35562391_35562634_35563201_35563427_35563766_35563910_35565226
transcript_68526.nic	chr15	+	5200	24	NIC	ENSG00000196547.15	novel	6394	23	NA	NA	-24	0	intron_retention	TRUE	canonical	0	0	junction_2	19.1234176853865	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTAAGAATCAACTGAAGAC	90902199	True	NA	6	True	AATAAA	-18	NA	90902403	90921191	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_90902527_90903230_90903433_90904189_90904340_90905250_90905509_90905578_90905724_90905844_90906017_90906369_90906498_90906739_90906914_90907308_90907496_90909326_90909505_90910089_90910293_90910500_90910684_90910846_90910962_90911170_90911239_90911384_90911551_90912042_90912280_90912541_90912665_90912876_90912992_90913272_90913407_90913613_90913756_90916122_90916257_90918193_90918389_90918644_90918756_90919634
transcript_6853.known	chr1	+	2245	7	FSM	ENSG00000116819.9	ENST00000373235.4	2245	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCAGTGCAACTTATTTA	35573204	True	NA	5	True	ATTAAA	-16	NA	35573313	35595328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_35573605_35573926_35574410_35574948_35575001_35588329_35588553_35589929_35590049_35590633_35590776_35594393
transcript_68536.known	chr15	+	3252	20	FSM	ENSG00000140553.18	ENST00000418476.2	3252	20	0	0	0	0	multi-exon	TRUE	canonical	3	162	junction_1	40.6274200216766	459	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCCCTGTCCTTGGG	90927005	True	NA	26	True	AATAAA	-17	NA	90935284	90954093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_90935376_90935543_90935706_90935945_90935983_90936284_90936461_90939730_90939824_90940305_90940474_90942436_90942606_90942911_90943083_90944891_90945064_90946613_90946915_90947795_90947891_90948141_90948284_90948653_90948795_90949315_90949444_90949653_90949721_90950153_90950268_90950499_90950616_90952928_90953047_90953154_90953311_90953458
transcript_6854.known	chr1	-	852	3	FSM	ENSG00000239636.2	ENST00000444348.2	902	3	42	8	42	-2	multi-exon	FALSE	canonical	0	0	junction_2	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATCAATGGATGGTGTTA	-35577702	False	NA	NA	False	ATTAAA	-17	NA	35577729	35569814	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_35569920_35574359_35574699_35577321
transcript_68561.nic	chr15	+	2002	9	NIC	ENSG00000166965.13	novel	2675	8	NA	NA	-23	0	intron_retention	FALSE	canonical	3	36	junction_1	33.6988037621516	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTTGATGGTCATTTT	90954838	False	NA	15	True	NA	NA	NA	90954857	90962342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_+_90954949_90955799_90955884_90956611_90956901_90957112_90957504_90957603_90957726_90959899_90959999_90960327_90960499_90961024_90961055_90961617
transcript_68567.known	chr15	+	1871	8	FSM	ENSG00000166965.13	ENST00000555155.5	1871	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	49.3608123506732	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACCTCAAGTGATACAGC	90953549	True	NA	-3	True	NA	NA	NA	90954880	90962324	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_90954949_90956611_90956901_90957112_90957504_90957603_90957726_90959899_90959999_90960333_90960499_90961024_90961055_90961617
transcript_68586.known	chr15	-	1856	4	FSM	ENSG00000184508.12	ENST00000394272.8	1856	4	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_3	11.0855260988773	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTCTGGAAAAGCGATCA	-90930592	True	NA	-18	True	ATTAAA	-16	NA	90932549	90929967	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_90931406_90931703_90931945_90932054_90932111_90932428
transcript_68587.known	chr15	-	1047	4	FSM	ENSG00000184508.12	ENST00000330334.7	1047	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	72.3202753190433	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTAAGCTGCTGCTGCTC	-90930589	True	NA	-8	True	AATAAA	-17	NA	90932546	90930924	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_90931557_90931703_90931945_90932054_90932111_90932428
transcript_68588.known	chr15	-	1220	3	FSM	ENSG00000184508.12	ENST00000494993.1	1220	3	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTAAGCTGCTGCTGCTC	-90930595	True	NA	-8	True	AATAAA	-17	NA	90932552	90930924	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_90931406_90931703_90931945_90932054
transcript_68593.known	chr15	-	2501	23	FSM	ENSG00000184056.15	ENST00000333371.8	2501	23	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_17	14.6203328358627	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTGGTCGTTCTGGACA	-91021153	True	NA	-1	True	AATAAA	-21	NA	91022594	90998672	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_90999055_90999676_90999794_90999899_90999976_91000489_91000592_91001388_91001463_91002049_91002183_91003084_91003132_91004876_91004932_91005054_91005120_91005379_91005455_91005693_91005785_91005972_91006060_91006371_91006446_91006651_91006730_91006949_91007047_91007468_91007574_91007869_91007965_91009800_91009847_91013803_91013872_91014383_91014434_91016962_91017025_91017804_91017886_91022153
transcript_68598.known	chr15	-	2356	22	FSM	ENSG00000184056.15	ENST00000574755.5	2356	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	28.1096815174299	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACGTTGGTCGTTCTGGA	-91021072	True	NA	-3	True	AATAAA	-19	NA	91022513	90998674	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_90999055_90999676_90999794_90999899_90999976_91000489_91000592_91001388_91001463_91002049_91002183_91003084_91003132_91004876_91004932_91005054_91005120_91005379_91005455_91005693_91005785_91005972_91006060_91006371_91006446_91006651_91006730_91006949_91007047_91007468_91007574_91007869_91007965_91009800_91009847_91013803_91013872_91014383_91014434_91017804_91017886_91022153
transcript_6860.known	chr1	-	4426	6	FSM	ENSG00000126067.12	ENST00000373237.4	4426	6	0	0	0	0	multi-exon	FALSE	canonical	3	2590	junction_4	70.4602015324963	1483	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACATGGCCTCGTCATTC	-35603959	True	NA	NA	False	CATAAA	-19	NA	35641526	35599540	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_35603375_35605232_35605283_35609245_35609409_35631273_35631345_35636309_35636433_35641341
transcript_68618.known	chr15	-	3072	15	FSM	ENSG00000198901.14	ENST00000394249.8	3072	15	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	118.0140297782	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATAGTGTGGTGTTTCCT	-90986059	True	NA	-4	True	AATAAA	-30	NA	90994535	90966039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_90967203_90969078_90969121_90969446_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90984692_90984826_90994406
transcript_68622.nnic	chr15	-	2633	14	NIC	ENSG00000198901.14	novel	3072	15	NA	NA	-85	0	combination_of_known_splicesites	FALSE	canonical	3	50	junction_1	91.3476356155121	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATAGTGTGGTGTTTCCT	-90994666	False	NA	-4	True	AATAAA	-30	NA	90994687	90966039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_90966654_90969446_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90984692_90984826_90994406
transcript_68626.nnic	chr15	-	2516	14	NNC	ENSG00000198901.14	novel	3072	15	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	100.03602901251	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATAGTGTGGTGTTTCCT	-90986103	True	NA	-4	True	AATAAA	-30	NA	90994579	90966039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_-_90966722_90969523_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90984692_90984826_90994406
transcript_68632.nic	chr15	-	3004	14	NIC	ENSG00000198901.14	novel	3072	15	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_1	73.3007906994172	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATAGTGTGGTGTTTCCT	-90986110	True	NA	-4	True	AATAAA	-30	NA	90994586	90966039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_90967203_90969523_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90984692_90984826_90994406
transcript_68635.nic	chr15	-	2546	14	NIC	ENSG00000198901.14	novel	4087	14	NA	NA	-85	0	combination_of_known_junctions	FALSE	canonical	3	101	junction_1	79.3963914938741	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTCAAAAAGATATAGTGT	-90994666	False	NA	-14	True	AATAAA	-20	NA	90994687	90966049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_90966654_90969523_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90984692_90984826_90994406
transcript_68637.known	chr15	-	4087	14	FSM	ENSG00000198901.14	ENST00000361188.9	4087	14	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	85.1934797627309	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATTAAAATCTGTA	NA	False	NA	-41	True	AATATA	-13	NA	90995629	90966076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_90967203_90969446_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90984692_90984826_90994406
transcript_6865.known	chr1	-	2628	2	FSM	ENSG00000142686.8	ENST00000270815.5	2628	2	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTTGAGTATGTGTTT	-35718413	True	NA	NA	False	AATAAA	-17	NA	35718884	35713876	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_35716327_35718706
transcript_6866.nic	chr1	-	2221	11	ISM	ENSG00000092853.14	ENST00000318121.8	8512	25	-30	17645	-30	-2792	5prime_fragment	FALSE	canonical	3	61	junction_1	24.4550608259313	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGATAAAGAAAATAATGAT	-35767589	True	NA	NA	False	AATAGA	-21	NA	35770008	35749756	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_35749812_35751249_35751507_35753744_35753937_35760341_35760917_35761095_35761205_35761997_35762071_35762403_35762482_35763159_35763322_35764265_35764715_35765217_35765327_35769846
transcript_68674.nnic	chr15	+	2490	11	NNC	ENSG00000176463.14	novel	2705	11	NA	NA	-20	22	at_least_one_novel_splicesite	TRUE	canonical	2	4	junction_10	17.6320730488505	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCACAAGTTGAAAACATTG	91853026	True	NA	NA	False	AATAAA	-20	NA	91853687	92163568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_+_91854089_91915992_91916459_92094880_92094980_92104278_92104543_92120464_92120630_92126060_92126260_92128350_92128490_92146983_92147160_92150949_92151015_92162755_92162999_92163295
transcript_68675.known	chr15	+	2705	11	FSM	ENSG00000176463.14	ENST00000424469.2	2705	11	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_10	17.3712406004868	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTCTCATGCTCTAAT	91853838	False	NA	NA	False	ATTAAA	-19	NA	91853855	92172435	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_91854089_91915992_91916459_92094880_92094980_92104278_92104543_92120464_92120630_92126060_92126260_92128350_92128490_92146983_92147160_92150949_92151015_92162755_92162999_92171779
transcript_68676.known	chr15	+	5102	10	FSM	ENSG00000176463.14	ENST00000318445.11	5102	10	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_7	9.11382073529328	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAGAGTTCTCTCTCTTC	91853046	True	NA	4	True	AATAAA	-14	NA	91853707	92165903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_91854089_91915992_91916459_92094880_92094980_92104278_92104543_92120464_92120630_92126060_92126260_92128350_92128490_92146983_92147160_92150949_92151015_92162755
transcript_68681.known	chr15	-	567	4	FSM	ENSG00000185442.13	ENST00000557398.2	567	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	62.4731053245226	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCTCAGACTGTCACTG	-92809645	True	NA	NA	False	TATAAA	-28	NA	92809798	92619301	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_92619460_92630213_92630346_92699039_92699164_92809645
transcript_68682.known	chr15	-	2604	3	FSM	ENSG00000185442.13	ENST00000327355.6	2604	3	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	5.5	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGAGTACCTTGGGCTTG	-92653493	True	NA	-8	True	AATAAA	-18	NA	92655775	92617447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_92619460_92630213_92630346_92655315
transcript_68684.known	chr15	-	2794	2	FSM	ENSG00000258741.5	ENST00000671695.1	2794	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTATAAGTGAGAACATAT	-92734060	True	NA	NA	False	NA	NA	NA	92734205	92713476	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_92716050_92733984
transcript_68687.nic	chr15	+	4776	33	ISM	ENSG00000173575.22	ENST00000626874.2	7764	38	126	19928	-6	0	5prime_fragment	TRUE	canonical	3	12	junction_17	8.27812441015475	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAACAAGGAGAAACAAATG	92895043	True	NA	-9	True	AAAAAG	-39	NA	92900314	93002234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_92900825_92901166_92901300_92924320_92924553_92927243_92927331_92929029_92929092_92937517_92937626_92939577_92939719_92941821_92941956_92942842_92943069_92944414_92944516_92945820_92945866_92946037_92946217_92948951_92949077_92953356_92953574_92955422_92955513_92956458_92956650_92967324_92967514_92971764_92971928_92972264_92972418_92974878_92974951_92978233_92978384_92979134_92979284_92980814_92980912_92981364_92981458_92984329_92984501_92985497_92985674_92991475_92991518_92992858_92992999_92996956_92997096_92997252_92997404_92998498_92998622_93000511_93000641_93002176
transcript_68688.nic	chr15	+	4844	33	ISM	ENSG00000173575.22	ENST00000626874.2	7764	38	135	19851	0	77	5prime_fragment	FALSE	canonical	3	12	junction_17	8.27812441015475	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGGTAATGATGCCCTT	92895052	True	NA	68	True	AAGAAA	-20	NA	92900323	93002311	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_92900825_92901166_92901300_92924320_92924553_92927243_92927331_92929029_92929092_92937517_92937626_92939577_92939719_92941821_92941956_92942842_92943069_92944414_92944516_92945820_92945866_92946037_92946217_92948951_92949077_92953356_92953574_92955422_92955513_92956458_92956650_92967324_92967514_92971764_92971928_92972264_92972418_92974878_92974951_92978233_92978384_92979134_92979284_92980814_92980912_92981364_92981458_92984329_92984501_92985497_92985674_92991475_92991518_92992858_92992999_92996956_92997096_92997252_92997404_92998498_92998622_93000511_93000641_93002176
transcript_68697.nic	chr15	+	4281	29	ISM	ENSG00000173575.22	ENST00000626874.2	7764	38	134	25093	-1	0	5prime_fragment	FALSE	canonical	3	12	junction_17	8.75888761458314	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGTGGACCCTGAAGAAAA	92895051	True	NA	NA	False	CATAAA	-7	NA	92900322	92997069	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_92900825_92901166_92901300_92924320_92924553_92927243_92927331_92929029_92929092_92937517_92937626_92939577_92939719_92941821_92941956_92942842_92943069_92944414_92944516_92945820_92945866_92946037_92946217_92948951_92949077_92953356_92953574_92955422_92955513_92956458_92956650_92967324_92967514_92971764_92971928_92972264_92972418_92974878_92974951_92978233_92978384_92979134_92979284_92980814_92980912_92981364_92981458_92984329_92984501_92985497_92985674_92991475_92991518_92992858_92992999_92996956
transcript_6870.nic	chr1	-	875	4	ISM	ENSG00000092853.14	ENST00000373220.7	3977	24	-80	26762	-30	-16202	5prime_fragment	FALSE	canonical	3	107	junction_1	18.7082869338697	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCACAAGGCAAGTAAAGCAT	-35767589	True	NA	NA	False	AGTAAA	-4	NA	35770008	35763166	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_35763322_35764265_35764715_35765217_35765327_35769846
transcript_68707.nic	chr15	+	3738	25	ISM	ENSG00000173575.22	ENST00000635856.1	4236	29	-4	8810	-1	5212	5prime_fragment	FALSE	canonical	3	12	junction_17	8.99063942232265	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGAGGAGGAAGAGCGGCA	92895048	True	NA	NA	False	NA	NA	NA	92900319	92984425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_92900825_92901166_92901300_92924320_92924553_92927243_92927331_92929029_92929092_92937517_92937626_92939577_92939719_92941821_92941956_92942842_92943069_92944414_92944516_92945820_92945866_92946037_92946217_92948951_92949077_92953356_92953574_92955422_92955513_92956458_92956650_92967324_92967514_92971764_92971928_92972264_92972418_92974878_92974951_92978233_92978384_92979134_92979284_92980814_92980912_92981364_92981458_92984329
transcript_6871.nic	chr1	-	716	3	ISM	ENSG00000092853.14	ENST00000373220.7	3977	24	-80	27865	-30	-17305	5prime_fragment	FALSE	canonical	3	137	junction_2	7.5	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGGTACATTTTAAAGAAT	-35767589	True	NA	28	True	AAAAAG	-15	NA	35770008	35764269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_35764715_35765217_35765327_35769846
transcript_68718.known	chr15	+	2232	13	FSM	ENSG00000173575.22	ENST00000420239.7	2232	13	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	7.7723691511805	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCCTGGGAGTTTTTAT	92895052	True	NA	8	True	AATAAA	-17	NA	92900323	92949234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_92900825_92901166_92901300_92924320_92924553_92927243_92927331_92929029_92929092_92937517_92937626_92939577_92939719_92941821_92941956_92942842_92943069_92944414_92944516_92945820_92945866_92946037_92946217_92948951
transcript_6872.nic	chr1	-	649	3	ISM	ENSG00000092853.14	ENST00000373220.7	3977	24	-80	27932	-30	-17372	5prime_fragment	FALSE	canonical	3	137	junction_2	7.5	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGACTTGAGAAAGAGGAG	-35767589	True	NA	-39	True	AGTAAA	-9	NA	35770008	35764336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_35764715_35765217_35765327_35769846
transcript_68720.nic	chr15	+	1574	9	ISM	ENSG00000173575.22	ENST00000420239.7	2232	13	-9	6225	-6	-3159	5prime_fragment	FALSE	canonical	3	24	junction_4	6.08147802758507	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAAGGGCCTAAAAAAACT	92895043	True	NA	NA	False	NA	NA	NA	92900314	92943009	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_92900825_92901166_92901300_92924320_92924553_92927243_92927331_92929029_92929092_92937517_92937626_92939577_92939719_92941821_92941956_92942842
transcript_68726.known	chr15	+	9350	39	FSM	ENSG00000173575.22	ENST00000394196.9	9350	39	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_17	9.68767815491622	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGCTAACACGTTGCATT	92895052	True	NA	41	True	ATTAAA	-25	NA	92900323	93027996	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_92900825_92901166_92901300_92924320_92924553_92927243_92927331_92929029_92929092_92937517_92937626_92939577_92939719_92941821_92941956_92942842_92943069_92944414_92944516_92945820_92945866_92946037_92946217_92948951_92949077_92953356_92953574_92955422_92955513_92956458_92956650_92967324_92967514_92971764_92971928_92972264_92972418_92974878_92974951_92978233_92978384_92979134_92979284_92980814_92980912_92981364_92981458_92984329_92984501_92985497_92985674_92991475_92991518_92992858_92992999_92996956_92997096_92997252_92997404_92998498_92998622_93000511_93000641_93002176_93002318_93004616_93004752_93009144_93009324_93012344_93012445_93014695_93014910_93020011_93020259_93024371
transcript_6873.nic	chr1	-	436	3	ISM	ENSG00000092853.14	ENST00000373220.7	3977	24	-80	28145	-30	-17585	5prime_fragment	FALSE	canonical	3	137	junction_2	7.5	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAAGGATTTACAAAACT	-35767589	True	NA	NA	False	AATAAA	-32	NA	35770008	35764549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_35764715_35765217_35765327_35769846
transcript_68730.nnic	chr15	+	1113	6	ISM	ENSG00000173575.22	ENST00000420239.7	2232	13	-19	11638	-16	8	5prime_fragment	FALSE	canonical	3	24	junction_4	6.58483105326173	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAAGCCAGAAGACCTGT	92895033	True	NA	NA	False	NA	NA	NA	92900304	92937596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_+_92900825_92901166_92901300_92924320_92924553_92927243_92927331_92929029_92929092_92937517
transcript_68731.known	chr15	+	802	5	FSM	ENSG00000272888.8	ENST00000556895.5	802	5	0	0	0	0	multi-exon	FALSE	canonical	3	553	junction_1	146.443461786452	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGCACACTAACCCAGATA	92882826	False	NA	-96	True	AAGAAA	-2	NA	92882861	92897975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_92883187_92885514_92885585_92886168_92886255_92892003_92892073_92897723
transcript_68736.known	chr15	-	3174	4	FSM	ENSG00000182175.15	ENST00000543599.5	3174	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	41.1204193666467	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTGTTGGAGTTTGTTTT	-93087702	False	NA	-1	True	AGTAAA	-28	NA	93088523	93043405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_93045706_93051992_93052508_93072915_93073032_93088280
transcript_68737.known	chr15	-	11350	4	FSM	ENSG00000182175.15	ENST00000329082.12	11359	4	7	2	7	-2	multi-exon	FALSE	canonical	3	13	junction_3	35.5183833465933	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCCCTGCTCTGTGATCT	-93088383	True	NA	NA	False	AATAAA	-15	NA	93089204	93035272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_93045706_93051992_93052508_93072915_93073032_93088918
transcript_68739.known	chr15	-	3038	3	FSM	ENSG00000182175.15	ENST00000542321.6	3038	3	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	6.5	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTTAGACGTGTTGG	-93068709	True	NA	-11	True	AGTAAA	-18	NA	93073148	93043415	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_93045706_93051992_93052508_93072915
transcript_68743.known	chr15	-	989	2	FSM	ENSG00000182175.15	ENST00000557420.1	989	2	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGCTGGGACCGCCCAC	-93068706	True	NA	NA	False	NA	NA	NA	93073145	93044946	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_93045706_93072915
transcript_68744.known	chr15	-	473	2	FSM	ENSG00000182175.15	ENST00000557608.1	473	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAACGGGCCAAAGACTC	-93068695	True	NA	NA	False	NA	NA	NA	93073134	93066005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_93066260_93072915
transcript_68753.known	chr15	-	1358	3	FSM	ENSG00000258433.2	ENST00000554649.2	1358	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	3.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCCAAGGTGACCAAAACA	-95046907	True	NA	NA	False	AAGAAA	-2	NA	95047088	95034107	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_95034745_95035383_95035739_95046722
transcript_68755.known	chr15	+	1149	5	FSM	ENSG00000259485.2	ENST00000656523.1	1149	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	18.364367672207	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTACACACTTGTGCTTT	97295065	True	NA	NA	False	AATAAA	-22	NA	97295836	97432089	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_97296324_97411191_97411279_97429048_97429205_97429769_97429890_97431790
transcript_68756.known	chr15	+	956	4	FSM	ENSG00000259485.2	ENST00000655490.1	956	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	13.9283882771841	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACACACTTGTGCTTTT	97295103	True	NA	NA	False	AATAAA	-23	NA	97295874	97432090	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_97296324_97411191_97411279_97429769_97429890_97431790
transcript_68757.known	chr15	+	798	3	FSM	ENSG00000259485.2	ENST00000659377.1	798	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	29.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTTACACACTTGTGC	97295137	True	NA	NA	False	AATAAA	-19	NA	97295908	97432086	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_97296324_97411191_97411279_97431790
transcript_68759.known	chr15	+	4062	8	FSM	ENSG00000140450.9	ENST00000268042.7	4062	8	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	11.1721227405812	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTATGAGGTGCTAGTTTT	97959664	True	NA	8	True	AATAAA	-14	NA	97960702	97973833	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_97961169_97965599_97965667_97965894_97966043_97968013_97968117_97969122_97969380_97969882_97970046_97970588_97970744_97971130
transcript_6876.known	chr1	+	13712	19	FSM	ENSG00000092847.13	ENST00000373204.6	13712	19	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_7	12.1100917002166	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTCGATCTGATGTTTGT	35874300	True	NA	9	True	ATTAAA	-19	NA	35883208	35930532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_35883447_35888426_35888611_35892556_35892678_35893096_35893279_35893673_35893811_35894036_35894172_35894314_35894403_35895121_35895270_35901473_35901594_35901947_35902071_35902203_35902338_35906934_35907120_35913841_35914002_35914183_35914275_35915347_35915543_35917592_35917728_35918321_35918424_35919054_35919255_35919498
transcript_68763.known	chr15	-	334	2	FSM	ENSG00000259424.2	ENST00000560221.1	334	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCGAGATAAGAAGTGGTT	-98647361	False	109	-12	True	AATAAA	-35	NA	98647371	98646950	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_98647194_98647280
transcript_68770.nic	chr15	-	3552	13	NIC	ENSG00000103852.13	novel	3872	14	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_12	15.7718102955875	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTTCCTTTCTGTACTT	-99248153	True	NA	-5	True	AATAAA	-17	NA	99249601	99136323	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_99138128_99139316_99139400_99156147_99156298_99161739_99161868_99175049_99175156_99199918_99200097_99218587_99218714_99218897_99219049_99221740_99221865_99228532_99228733_99241364_99241560_99245388_99245511_99249416
transcript_68773.nic	chr15	-	3429	12	NIC	ENSG00000103852.13	novel	3872	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_11	18.057758571542	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTTCCTTTCTGTACTT	-99248152	True	NA	-5	True	AATAAA	-17	NA	99249600	99136323	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_99138128_99139316_99139400_99156147_99156298_99161739_99161868_99175049_99175156_99199918_99200097_99218587_99218714_99218897_99219049_99221740_99221865_99228532_99228733_99241364_99241560_99249416
transcript_68785.known	chr15	+	967	10	FSM	ENSG00000168904.15	ENST00000561276.5	967	10	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	27.8288419529891	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTTAGTTTTGTGGCTT	99249996	True	NA	NA	False	NA	NA	NA	99251519	99386035	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_99251542_99255897_99255974_99276575_99276617_99287256_99287295_99287813_99287952_99333922_99334130_99352368_99352472_99361335_99361512_99363105_99363266_99386029
transcript_68787.known	chr15	+	5852	10	FSM	ENSG00000168904.15	ENST00000301981.8	5852	10	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	8.84572854999784	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACGAGTTTTGTGGTGTTT	99249957	True	NA	NA	False	NA	NA	NA	99251480	99390729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_99251542_99255897_99256126_99276575_99276617_99287256_99287295_99287813_99287952_99333922_99334130_99352368_99352472_99361335_99361512_99363105_99363266_99386029
transcript_68789.known	chr15	+	1235	9	FSM	ENSG00000168904.15	ENST00000447360.6	1235	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_8	26.4516067564902	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATTTGTCTTCTGTGTTT	99249981	True	NA	13	True	AATATA	-20	NA	99251504	99386296	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_99251542_99255897_99256126_99276575_99276617_99287256_99287295_99287813_99287952_99333922_99334130_99352368_99352472_99361335_99361512_99386029
transcript_68798.known	chr15	+	2854	11	FSM	ENSG00000068305.18	ENST00000557785.5	2854	11	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_8	35.8414564436213	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTGGAAAAAAAAAGCCATG	99561196	True	NA	NA	False	AAAACA	-22	NA	99565979	99713782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_99566105_99598429_99598512_99632977_99633174_99645560_99645765_99671322_99671455_99674392_99674613_99675398_99675459_99690240_99690429_99706728_99706856_99710633_99710761_99712389
transcript_68802.known	chr15	+	5824	11	FSM	ENSG00000068305.18	ENST00000354410.9	5824	11	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	55.6651596602399	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACGGACTGGCTCTTCCTG	99565687	False	NA	-12	True	NA	NA	NA	99565699	99716466	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_99566105_99598429_99598512_99632977_99633174_99645560_99645765_99671519_99671658_99674392_99674613_99675398_99675459_99690240_99690429_99706728_99706856_99710633_99710761_99712389
transcript_68804.known	chr15	+	5464	10	FSM	ENSG00000068305.18	ENST00000691492.1	2633	10	-90	-2741	0	16	multi-exon	FALSE	canonical	3	63	junction_1	47.5077641477789	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGTTGTTGTAAACTGTT	99561144	True	NA	31	True	AATAAA	-41	NA	99565927	99716422	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_99566105_99632977_99633174_99645560_99645765_99671322_99671455_99674392_99674613_99675398_99675459_99690240_99690429_99706728_99706856_99710633_99710761_99712389
transcript_68812.nnic	chr15	+	2447	9	NNC	ENSG00000068305.18	novel	2854	11	NA	NA	-15	-17321	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_8	45.1774279923061	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGGAGGGAGGAATTGAC	99561129	True	NA	5	True	AATAAA	-17	NA	99565912	99695248	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_+_99566105_99598429_99598512_99632977_99633174_99645560_99645765_99671322_99671455_99674392_99674613_99675398_99675459_99690240_99690429_99694075
transcript_68820.nnic	chr15	+	2297	8	NNC	ENSG00000068305.18	novel	2633	10	NA	NA	1	-17321	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_7	59.1966628954638	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGGAGGGAGGAATTGAC	99561197	True	NA	5	True	AATAAA	-17	NA	99565980	99695248	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr15_+_99566105_99632977_99633174_99645560_99645765_99671322_99671455_99674392_99674613_99675398_99675459_99690240_99690429_99694075
transcript_68832.known	chr15	-	2847	5	FSM	ENSG00000183060.16	ENST00000332728.8	2847	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	6.79613860953409	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCCTTTTTATTTAATT	NA	False	NA	4	True	AATAAA	-28	NA	99733444	99727400	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_99729732_99731172_99731199_99731717_99732008_99732928_99733029_99733344
transcript_68836.nic	chr15	-	2739	4	NIC	ENSG00000183060.16	novel	2885	6	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	0.816496580927726	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTCCCCCTTTTTATTT	-99731440	True	NA	0	True	AATAAA	-24	NA	99733380	99727404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_99729732_99731172_99731199_99731717_99732008_99733284
transcript_68837.nic	chr15	-	2736	4	NIC	ENSG00000183060.16	novel	559	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	14.1656862405839	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTCCCCCTTTTTATTT	-99731497	True	NA	0	True	AATAAA	-24	NA	99733437	99727404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_99729732_99731172_99731199_99731717_99732008_99733344
transcript_68844.known	chr15	-	2672	3	FSM	ENSG00000183060.16	ENST00000409796.5	2672	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	20	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTCCCCCTTTTTATTT	-99731399	True	NA	0	True	AATAAA	-24	NA	99733339	99727404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_99729732_99731717_99732008_99733284
transcript_68845.known	chr15	-	2710	3	FSM	ENSG00000183060.16	ENST00000684762.1	2710	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTCCCCCTTTTTATTT	-99731497	True	NA	0	True	AATAAA	-24	NA	99733437	99727404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_99729732_99731717_99732008_99733344
transcript_68848.known	chr15	-	2431	2	FSM	ENSG00000183060.16	ENST00000545021.2	2431	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCCTTTTTATTTAATT	NA	False	NA	4	True	AATAAA	-28	NA	99733444	99727400	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_99729732_99733344
transcript_68849.nnic	chr15	-	2458	2	NIC	ENSG00000183060.16	novel	2672	3	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTCCCCCTTTTTATTT	-99731475	True	NA	0	True	AATAAA	-24	NA	99733415	99727404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_99729732_99733284
transcript_68851.known	chr15	-	2222	2	FSM	ENSG00000183060.16	ENST00000496108.5	2222	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTTCTTGCAATGGTG	NA	False	NA	NA	False	AATAAA	-17	NA	99733444	99715700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_99717823_99733344
transcript_68860.nic	chr15	-	2474	7	NIC	ENSG00000140471.17	novel	4755	7	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	13.8283123417944	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGACATTTTATTTTCCAG	-100601278	True	NA	-6	True	AATAAA	-22	NA	100602210	100569234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr15_-_100570118_100571893_100572066_100573650_100574242_100574986_100575129_100580262_100580353_100580443_100580946_100602116
transcript_68863.known	chr15	+	4926	6	FSM	ENSG00000183475.13	ENST00000332783.12	4926	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	5.41848687365763	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTGGAGTTGTATTTTA	100601328	True	NA	18	True	ATTAAA	-22	NA	100602588	100651701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_100603047_100603214_100603314_100609706_100609829_100612165_100612428_100629436_100630043_100648322
transcript_68867.known	chr15	+	1694	5	FSM	ENSG00000183475.13	ENST00000343276.4	1694	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	5.97390157267426	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCACAAGATTTCATAAAAAT	100601348	True	NA	NA	False	AATAAA	-19	NA	100602608	100630209	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_100603047_100603214_100603314_100609706_100609829_100612165_100612428_100629436
transcript_68868.known	chr15	+	2133	5	FSM	ENSG00000183475.13	ENST00000558747.5	2133	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	25.936219847927	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTAAGCGTAAAATCTT	100601347	True	NA	NA	False	TTTAAA	-8	NA	100602607	100649533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_100603047_100603214_100603314_100609706_100609829_100612165_100612428_100648322
transcript_68874.known	chr15	-	750	4	FSM	ENSG00000140471.17	ENST00000561073.1	750	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	22.573337271116	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAATCCATCTGGTCCTGG	-100601218	True	NA	NA	False	NA	NA	NA	100602150	100576574	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_100576703_100580262_100580353_100580443_100580946_100602120
transcript_68876.known	chr15	+	3469	13	FSM	ENSG00000184254.17	ENST00000329841.10	3469	13	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	11.3578166916005	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGCTTTTTCATTTAA	100878968	True	NA	7	True	AATAAA	-18	NA	100879830	100916626	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_100880007_100885266_100885372_100887571_100887713_100892509_100892640_100892944_100893007_100893953_100894083_100895932_100896047_100898082_100898186_100900574_100900760_100905522_100905688_100907120_100907279_100908407_100908483_100914700
transcript_68877.known	chr15	+	3104	10	FSM	ENSG00000184254.17	ENST00000346623.6	3104	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	21.9752947704215	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGCTTTTTCATTTAA	100879012	True	NA	7	True	AATAAA	-18	NA	100879874	100916626	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_100880007_100885266_100885372_100887571_100887713_100895932_100896047_100898082_100898186_100900574_100900760_100905522_100905688_100907120_100907279_100908407_100908483_100914700
transcript_68878.known	chr15	+	576	4	FSM	ENSG00000184254.17	ENST00000560555.1	576	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	29.8254179443567	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCCCTTCAAAGAGGGTG	100878985	True	NA	NA	False	TTTAAA	-17	NA	100879847	100892239	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_100880007_100885266_100885372_100887571_100887713_100892068
transcript_68879.known	chr15	+	1670	1	FSM	ENSG00000184254.17	ENST00000557963.1	1670	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTATGTTTTTGAGTCC	100878976	True	NA	NA	False	AGTAAA	-19	NA	100879838	100881508	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_100879800_100881500
transcript_6888.known	chr1	+	19660	19	FSM	ENSG00000126070.20	ENST00000373191.9	19660	19	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_9	31.8600334022904	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTCTTGTGTGGTCATC	35929893	True	NA	NA	False	AATAAA	-22	NA	35931104	36072500	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_35931446_35945691_35945864_35966954_35967076_35972023_35972233_35973374_35973512_36004340_36004476_36008689_36008778_36008896_36009045_36009474_36009595_36013629_36013753_36013914_36014049_36027113_36027299_36034173_36034334_36036176_36036268_36039789_36039985_36040306_36040442_36043446_36043549_36054945_36055146_36055636
transcript_68881.known	chr15	-	1439	7	FSM	ENSG00000131871.15	ENST00000398226.7	1439	7	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	343.955786887404	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGTGGCAGGAGTGTCCA	-101266737	True	NA	NA	False	NA	NA	NA	101277450	101270816	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_101271646_101272763_101272857_101274419_101274496_101274591_101274682_101275254_101275362_101276540_101276676_101277341
transcript_68882.known	chr15	-	1218	6	FSM	ENSG00000131871.15	ENST00000526049.6	1218	6	0	0	0	0	multi-exon	FALSE	canonical	3	836	junction_3	75.5232414558591	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTATTACTTATTTCTCT	-101266772	True	NA	-8	True	ATTAAA	-21	NA	101277485	101272190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_101272857_101274419_101274496_101274591_101274682_101275254_101275362_101276540_101276676_101277341
transcript_68883.known	chr15	-	856	4	FSM	ENSG00000131871.15	ENST00000527833.5	856	4	0	0	0	0	multi-exon	FALSE	canonical	3	836	junction_1	85.9806179709513	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTCTGCCAATCTTCAGA	-101266728	True	NA	NA	False	NA	NA	NA	101277441	101274167	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_101274682_101275254_101275362_101276540_101276676_101277341
transcript_68884.known	chr15	-	556	3	FSM	ENSG00000131871.15	ENST00000529968.1	556	3	0	0	0	0	multi-exon	FALSE	canonical	3	963	junction_1	41	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATATCAAGAAGAATACACG	-101266787	True	NA	NA	False	NA	NA	NA	101277500	101275099	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_101275362_101276540_101276676_101277341
transcript_68885.known	chr15	-	355	2	FSM	ENSG00000131871.15	ENST00000534014.1	355	2	0	0	0	0	multi-exon	FALSE	canonical	3	1045	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATTTAAAAAAAAAAAAAATA	-101266740	True	NA	NA	False	AGTAAA	-35	NA	101277453	101276432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_101276676_101277341
transcript_68890.known	chr15	-	1052	9	FSM	ENSG00000131876.18	ENST00000254193.11	1052	9	0	0	0	0	multi-exon	FALSE	canonical	3	1968	junction_3	216.970620130929	1415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTGTCATCATGGTGC	-101276691	True	NA	-2	True	AATAAA	-22	NA	101295248	101281509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_101281783_101284966_101285061_101285725_101285802_101286213_101286294_101286907_101287011_101287655_101287703_101291961_101292041_101293024_101293173_101295096
transcript_68899.known	chr15	-	924	8	FSM	ENSG00000131876.18	ENST00000559309.5	924	8	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_3	807.877617525055	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTGTGTGTCATCATG	-101276647	True	NA	-6	True	AATAAA	-18	NA	101295204	101281513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_101281783_101284966_101285061_101285725_101285802_101286907_101287011_101287655_101287703_101291961_101292041_101293024_101293173_101295096
transcript_68904.known	chr15	-	2108	7	FSM	ENSG00000131876.18	ENST00000558036.5	2108	7	0	0	0	0	multi-exon	FALSE	canonical	3	2243	junction_2	166.731737297439	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTGTGTGTCATCATG	-101276725	True	NA	-6	True	AATAAA	-18	NA	101295282	101281513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_101281783_101284966_101285061_101285725_101287011_101287655_101287703_101291961_101292041_101293024_101293173_101295096
transcript_68908.known	chr15	-	556	6	FSM	ENSG00000131876.18	ENST00000394082.8	556	6	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_3	1120.17380794232	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTTGTGTTAGCAAAGT	-101276646	True	NA	NA	False	NA	NA	NA	101295203	101281653	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_101281783_101284966_101285061_101285725_101285802_101286907_101287011_101287655_101287703_101295096
transcript_68910.known	chr15	-	506	5	FSM	ENSG00000131876.18	ENST00000540017.6	506	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	1223.04180222918	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATAATAGGCCCTCTTG	-101276698	True	NA	NA	False	NA	NA	NA	101295255	101281708	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_101281783_101284966_101285061_101285725_101285802_101286907_101287011_101295096
transcript_68913.known	chr15	+	2590	2	FSM	ENSG00000259172.1	ENST00000558838.1	2590	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTTTCAATCATTCCAC	101295310	True	NA	NA	False	AATAAA	-21	NA	101295418	101305737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_101295730_101303458
transcript_68914.known	chr15	-	1353	6	FSM	ENSG00000184277.13	ENST00000559107.5	1353	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	103.459364003458	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATATGCTGTCATTTGA	-101652374	False	NA	NA	False	NA	NA	NA	101652384	101632976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_101633729_101645086_101645163_101646724_101646900_101650003_101650162_101651695_101651774_101652270
transcript_68915.known	chr15	-	1395	6	FSM	ENSG00000184277.13	ENST00000333202.8	1395	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	91.358633965269	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGGGCCTGTTTTCTA	-101650917	True	NA	63	True	AATAAA	-17	NA	101652381	101641847	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_101642645_101645086_101645163_101646724_101646900_101650003_101650162_101651695_101651774_101652270
transcript_68916.known	chr15	-	1267	5	FSM	ENSG00000184277.13	ENST00000428002.6	1267	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	97.7113094784836	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATATGCTGTCATTTGA	-101650912	True	NA	NA	False	NA	NA	NA	101652376	101632976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_101633729_101645086_101645163_101646724_101646900_101650003_101650162_101652270
transcript_68918.known	chr15	-	1329	5	FSM	ENSG00000184277.13	ENST00000347970.7	1329	5	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_4	24.3002057604457	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGGCCTGTTTTCTATA	-101652381	False	NA	65	True	AATAAA	-19	NA	101652391	101641845	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_101642645_101645086_101645163_101646724_101646900_101650003_101650162_101652270
transcript_68925.known	chr15	-	3481	19	FSM	ENSG00000185418.16	ENST00000335968.8	3481	19	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_6	9.92269502419629	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAGTAGTATAAGGTG	-101721887	True	NA	NA	False	AATATA	-9	NA	101724473	101653595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_101654731_101656921_101657037_101657784_101657858_101661711_101661817_101671485_101671587_101671670_101671749_101675599_101675738_101684074_101684238_101685895_101686063_101701085_101701185_101702238_101702386_101703858_101703938_101705682_101705748_101708792_101708911_101711879_101712002_101714839_101714964_101721125_101721323_101723092_101723165_101724090
transcript_68933.nic	chr15	-	458	2	ISM	ENSG00000185418.16	ENST00000615656.1	2356	19	-60	67139	-29	-8441	5prime_fragment	FALSE	canonical	3	76	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGGAAAGCGAGGCTGAC	-101721916	True	NA	NA	False	AAAAAG	-8	NA	101724502	101723118	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr15_-_101723165_101724090
transcript_68934.known	chr15	-	503	3	FSM	ENSG00000259658.5	ENST00000558592.1	503	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATTTACTACCTGGTTT	NA	False	NA	-5	True	ATTAAA	-26	NA	101745710	101737098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_-_101737370_101744440_101744597_101745634
transcript_68945.known	chr15	+	427	3	FSM	ENSG00000185596.16	ENST00000559884.5	427	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	106	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATTAACTCACACTTCAT	101953192	True	NA	NA	False	TATAAA	-24	NA	101961602	101966755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr15_+_101961642_101966069_101966224_101966521
transcript_68949.known	chr16	+	1054	2	FSM	ENSG00000231439.4	ENST00000527434.1	1054	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTCACTACTCTTTTTT	NA	False	NA	NA	False	CATAAA	-11	NA	22909	25123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_23086_24245
transcript_68950.known	chr16	-	1372	3	FSM	ENSG00000161980.6	ENST00000293860.6	1372	3	0	0	0	0	multi-exon	FALSE	canonical	3	1200	junction_1	2	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACATGTTGATCAGTTCC	-45383	True	NA	NA	False	NA	NA	NA	53608	46406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_47558_51557_51646_53475
transcript_68953.known	chr16	+	831	6	FSM	ENSG00000161981.11	ENST00000397876.6	831	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	450.564534778316	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCAAATGCCCTAGTCACA	43486	True	NA	-58	True	NA	NA	NA	53886	57372	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_54059_55458_55550_55776_55883_56320_56421_56538_56614_57085
transcript_68955.known	chr16	+	1085	5	FSM	ENSG00000161981.11	ENST00000383018.7	1085	5	0	0	0	0	multi-exon	FALSE	canonical	3	906	junction_1	31.8040877875785	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGGAGCTCACAGTGGC	43428	True	NA	13	True	AATAAA	-24	NA	53828	57668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_54059_55458_55550_55776_55883_56538_56614_57085
transcript_68959.known	chr16	+	408	4	FSM	ENSG00000161981.11	ENST00000417493.1	408	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	436.075171909105	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGCCGGCCACGTCCT	43498	True	NA	NA	False	NA	NA	NA	53898	56613	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_54059_55458_55543_55793_55883_56538
transcript_68967.known	chr16	-	2992	18	FSM	ENSG00000007384.15	ENST00000262316.10	2992	18	0	0	0	0	multi-exon	FALSE	canonical	1	57	junction_2	46.2804000903833	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGGCTTCCCTATCCTTC	-69651	True	NA	-7	True	AATAAA	-35	NA	72631	58058	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_58760_58973_59128_59248_59350_59418_59495_59731_59827_60215_60280_60438_60540_61119_61282_61384_61460_61584_61697_61797_62053_62537_62696_62774_62898_62972_63183_63586_63801_64698_64830_64898_65040_72512
transcript_6897.known	chr1	+	1035	6	FSM	ENSG00000126070.20	ENST00000397828.3	1035	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	31.7716855076969	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAGAGGAGAAAAAACTAAT	35929870	True	NA	NA	False	NA	NA	NA	35931081	35982652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_35931446_35945691_35945864_35966954_35967076_35972023_35972233_35973374_35973512_35982620
transcript_68976.nic	chr16	-	3100	17	NIC	ENSG00000007384.15	novel	2992	18	NA	NA	-42	0	intron_retention	FALSE	canonical	1	57	junction_2	46.9240992854418	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCAGGGCTTCCCTATCC	-69693	True	NA	-10	True	AATAAA	-32	NA	72673	58061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_58760_58973_59128_59248_59350_59418_59495_59731_59827_60215_60280_60438_60540_61119_61282_61384_61460_61584_61697_61797_62053_62537_62696_62774_62898_62972_63183_63586_63801_64698_65040_72512
transcript_68981.nnic	chr16	-	2869	17	NIC	ENSG00000007384.15	novel	2992	18	NA	NA	-42	0	combination_of_known_splicesites	FALSE	canonical	1	35	junction_7	57.2570615186459	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCAGGGCTTCCCTATCC	-69693	True	NA	-10	True	AATAAA	-32	NA	72673	58061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_58760_58973_59128_59248_59350_59418_59495_59731_59827_60215_60280_60438_60540_61384_61460_61584_61697_61797_62053_62537_62696_62774_62898_62972_63183_63586_63801_64698_64830_64898_65040_72512
transcript_68987.nic	chr16	-	3152	17	NIC	ENSG00000007384.15	novel	2992	18	NA	NA	-42	0	intron_retention	FALSE	canonical	3	123	junction_11	36.8946451907319	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCAGGGCTTCCCTATCC	-69693	True	NA	-10	True	AATAAA	-32	NA	72673	58061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_58760_58973_59350_59418_59495_59731_59827_60215_60280_60438_60540_61119_61282_61384_61460_61584_61697_61797_62053_62537_62696_62774_62898_62972_63183_63586_63801_64698_64830_64898_65040_72512
transcript_6901.known	chr1	+	1490	10	FSM	ENSG00000092850.12	ENST00000207457.8	1490	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.4569664858009	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCGGCTGTTCTCTGCCCC	36083973	True	NA	2	True	AATAAA	-15	NA	36084093	36088275	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_36084150_36084869_36085078_36085162_36085289_36085835_36086042_36086703_36086848_36086930_36087046_36087203_36087312_36087438_36087583_36087727_36087808_36087972
transcript_69016.known	chr16	-	3128	14	FSM	ENSG00000103148.17	ENST00000611875.5	3128	14	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_13	47.3016256272683	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGAAGTGGAGCCTCCCT	-137839	True	NA	NA	False	NA	NA	NA	138673	85385	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_86871_88697_88891_89712_89903_92595_92726_93218_93326_98144_98302_100371_100510_110524_110607_112621_112776_117300_117376_119125_119256_130521_130592_138149_138335_138641
transcript_69039.known	chr16	+	1193	5	FSM	ENSG00000103152.12	ENST00000219431.4	1193	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	265.263548193113	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGTGCCTTAGCCAGA	68954	True	NA	24	True	AATAAA	-15	NA	78256	85842	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_78334_79138_79332_79424_79701_83051_83257_85400
transcript_6904.known	chr1	+	1651	6	FSM	ENSG00000116863.11	ENST00000373178.5	1651	6	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_3	28.175166370405	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGTTTCTTGTTTCTCC	36085867	True	NA	20	True	AATAAA	-20	NA	36088891	36093932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_36089116_36091243_36091341_36091617_36091826_36091909_36092095_36092421_36092523_36093096
transcript_69042.known	chr16	+	1036	4	FSM	ENSG00000103152.12	ENST00000356432.8	1036	4	0	0	0	0	multi-exon	FALSE	canonical	3	516	junction_1	28.7556757682529	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCCTTAGCCAGAGCTC	68922	True	NA	28	True	AATAAA	-19	NA	78224	85846	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_78334_79424_79701_83051_83257_85400
transcript_69045.nic	chr16	+	1102	3	ISM	ENSG00000103152.12	ENST00000356432.8	1036	4	-13	2091	-13	-1929	5prime_fragment	FALSE	canonical	3	516	junction_1	4.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAGGAAAAGAAAGGGTT	68909	True	NA	NA	False	NA	NA	NA	78211	83755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_78334_79424_79701_83051
transcript_69046.known	chr16	+	576	3	FSM	ENSG00000188536.13	ENST00000251595.11	576	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTGTGCCTGGGTTC	NA	False	NA	NA	False	AATAAA	-17	NA	172875	173710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_173008_173124_173330_173471
transcript_69047.known	chr16	+	577	3	FSM	ENSG00000206172.8	ENST00000320868.9	577	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	3	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTGTGCCTGAGTTT	176664	False	NA	NA	False	AATAAA	-17	NA	176679	177522	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_176812_176928_177134_177282
transcript_69048.known	chr16	+	528	3	FSM	ENSG00000086506.3	ENST00000199708.3	528	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	8	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTCTTGCCGTGCTCTCT	179972	True	NA	10	True	AGTAAA	-17	NA	180458	181179	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_180582_180665_180871_180979
transcript_69054.nic	chr16	-	1598	12	NIC	ENSG00000007392.17	novel	1520	11	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	96	junction_10	235.183803625172	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGCGGGGGGTTTCTGCT	-219495	True	NA	-31	True	AATAAA	-23	NA	229479	188989	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_189340_189967_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_208600_208665_220648_220748_227241_227337_228332_228403_229278
transcript_6906.nnic	chr1	+	1564	5	NIC	ENSG00000116863.11	novel	1651	6	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	131.078936141548	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGTTTCTTGTTTCTCC	36085857	True	NA	20	True	AATAAA	-20	NA	36088881	36093932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_36089116_36091617_36091826_36091909_36092095_36092421_36092523_36093096
transcript_69064.known	chr16	-	1520	11	FSM	ENSG00000007392.17	ENST00000629543.2	1520	11	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_9	196.873157134232	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTCCTCTGCGTAGAG	-219466	True	NA	-16	True	AATAAA	-38	NA	229450	188974	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_189340_189967_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_220648_220748_227241_227337_228332_228403_229278
transcript_69073.known	chr16	-	989	11	FSM	ENSG00000007392.17	ENST00000418978.5	989	11	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_9	245.015183203001	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGGCGTCGGAGGCGGTCA	-229339	False	NA	NA	False	NA	NA	NA	229374	190121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_208600_208665_220648_220748_227241_227337_228332_228403_229278
transcript_69074.known	chr16	-	1504	10	FSM	ENSG00000007392.17	ENST00000397783.5	1504	10	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	150.898870558406	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTCTGCGTAGAGGCTT	-219479	True	NA	-12	True	AATAAA	-42	NA	229463	188970	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_189340_189930_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_220648_220748_227241_227337_229278
transcript_69076.known	chr16	-	1434	10	FSM	ENSG00000007392.17	ENST00000293872.13	1434	10	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_9	66.7096157949225	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGCGGGGGGTTTCTGCT	-219465	True	NA	-31	True	AATAAA	-23	NA	229449	188989	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_189340_189967_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_220648_220748_227241_227337_229278
transcript_6908.known	chr1	-	4669	4	FSM	ENSG00000171812.13	ENST00000397799.2	4669	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	4.02768199119819	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTGTGCTGAAACTGATA	-36125138	True	NA	NA	False	AATAAA	-18	NA	36125222	36095238	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_36099488_36100049_36100259_36115707_36115753_36125056
transcript_69087.known	chr16	-	1211	10	FSM	ENSG00000007392.17	ENST00000419516.5	1211	10	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_8	207.450127875486	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGTGTCTGGTGGGGATG	-219450	True	NA	NA	False	NA	NA	NA	229434	189895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_220648_220748_227241_227337_228332_228403_229278
transcript_69095.known	chr16	-	2097	9	FSM	ENSG00000007392.17	ENST00000337351.8	2097	9	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_8	66.317418526357	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGCGTAGAGGCTTTT	-219479	True	NA	-10	True	AATAAA	-44	NA	229463	188968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_220648_220748_227241_227337_229278
transcript_69107.nic	chr16	-	650	5	ISM	ENSG00000007392.17	ENST00000293872.13	1434	10	-30	17014	-16	0	5prime_fragment	FALSE	canonical	3	453	junction_4	64.1677489086223	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGTGAGATAAGTGCCTT	-219495	True	NA	31	True	AAAAAG	-27	NA	229479	206003	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_206148_208077_208189_220648_220748_227241_227337_229278
transcript_69109.known	chr16	-	2376	17	FSM	ENSG00000076344.16	ENST00000316163.9	2376	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	3.09232921921325	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATCCTGCTGTGGGTGCA	-275860	True	NA	NA	False	AATAAA	-25	NA	275914	268310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_269384_269502_269586_270522_270662_270743_270832_270983_271100_271201_271316_271398_271461_271539_271570_272862_272932_273474_273557_273759_273837_274042_274102_274213_274266_274975_275083_275282_275334_275401_275499_275837
transcript_6911.known	chr1	+	3238	18	FSM	ENSG00000116871.16	ENST00000373150.8	3238	18	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_7	53.0772108481473	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCCTGTTCTTGGAGCT	36151819	True	NA	15	True	AATAAA	-16	NA	36156197	36180849	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_36156464_36170970_36171316_36171512_36171582_36172463_36172628_36173363_36173479_36174897_36175009_36176198_36176322_36176417_36176582_36176696_36176843_36177872_36178202_36178418_36178597_36178684_36178824_36178920_36179026_36179261_36179316_36179514_36179558_36179665_36179757_36179873_36180068_36180247
transcript_69111.known	chr16	+	2687	15	FSM	ENSG00000167930.17	ENST00000666018.1	2687	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	295.423044988376	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGATCCCGGCCGGGC	234435	False	NA	NA	False	AATAAA	-32	NA	234520	269955	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_234858_249548_249655_254380_254682_259482_259600_259968_260161_261383_261515_262092_262226_262423_262554_263261_263403_263699_263776_264015_264172_264613_264717_264810_264909_268775_269006_269519
transcript_69144.known	chr16	+	2901	13	FSM	ENSG00000167930.17	ENST00000301678.7	2901	13	0	0	0	0	multi-exon	TRUE	canonical	1	10	junction_2	236.155360232764	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTGTGTGCGTCTGCCTGT	226485	True	NA	38	True	NA	NA	NA	234845	266120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_234858_249548_249655_254387_254682_259482_259600_259968_260161_261383_261515_262092_262226_262423_262554_263261_263403_263699_263776_264015_264172_264613_264717_264810
transcript_69150.nic	chr16	+	3222	13	NIC	ENSG00000167930.17	novel	2909	13	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_4	227.08813450582	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGTGGTCAGGCGTGAG	234395	True	NA	14	True	AATAAA	-23	NA	234480	266096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_234858_249548_249655_254380_254682_259482_259600_259995_260161_261383_261515_262092_262226_262423_262554_263261_263403_263699_263776_264015_264172_264613_264717_264810
transcript_6917.known	chr1	+	3324	17	FSM	ENSG00000116871.16	ENST00000373151.6	3324	17	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_13	79.7738013071961	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCAATCCTGCCTGTT	36151823	True	NA	6	True	AATAAA	-7	NA	36156201	36180840	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_36156464_36170970_36171316_36171512_36171582_36172463_36172628_36173363_36173479_36174897_36175009_36176198_36176582_36176696_36176843_36177872_36178202_36178418_36178597_36178684_36178824_36178920_36179026_36179261_36179316_36179511_36179558_36179665_36179757_36179873_36180068_36180247
transcript_69177.known	chr16	+	964	6	FSM	ENSG00000242173.10	ENST00000219409.8	964	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	1.72046505340853	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGGTGTCGTCTCTTT	280559	True	NA	14	True	ATTAAA	-22	NA	280590	283010	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_280754_281745_281926_282024_282109_282296_282374_282466_282531_282614
transcript_69179.known	chr16	+	432	3	FSM	ENSG00000167930.17	ENST00000447499.1	432	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	235.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGGTGAGCCTCGGCT	226469	True	NA	NA	False	NA	NA	NA	234829	254674	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_234858_249548_249659_254380
transcript_69185.known	chr16	-	3324	10	FSM	ENSG00000103126.15	ENST00000354866.7	3324	10	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_9	45.8300672236949	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCTGTGGTGTGTCTT	-352438	False	NA	-2	True	AATAAA	-17	NA	352449	287440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_288249_289439_289608_293487_293719_297055_297227_297721_298252_304303_304442_309972_310070_314542_314684_346147_347107_352368
transcript_69191.known	chr16	-	3672	13	FSM	ENSG00000129925.11	ENST00000431232.7	3672	13	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_10	65.001869631231	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGTTTTTACATTTTTTCT	-376164	True	NA	-16	True	ACTAAA	-1	NA	381978	370787	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_372284_372610_372728_374004_374152_374220_374400_374755_374893_375132_375257_375344_375436_376135_376456_376543_376813_377036_377165_377377_377586_377670_377849_381700
transcript_6920.nic	chr1	+	3216	17	NIC	ENSG00000116871.16	novel	3238	18	NA	NA	-51	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_5	83.0773124490074	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCCTGTTCTTGGAGCT	NA	False	NA	15	True	AATAAA	-16	NA	36156108	36180849	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_36156464_36170970_36171316_36171512_36171582_36172463_36172628_36173363_36173479_36176198_36176322_36176417_36176582_36176696_36176843_36177872_36178202_36178418_36178597_36178684_36178824_36178920_36179026_36179261_36179316_36179514_36179558_36179665_36179757_36179873_36180068_36180247
transcript_69212.nnic	chr16	-	1112	6	NNC	ENSG00000086504.18	novel	1524	6	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	canonical	1	83	junction_5	687.286665082337	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTATCTTTGCTTT	-370365	False	NA	-20	True	AGTAAA	-16	NA	370388	367393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_367783_368327_368415_368500_368636_369067_369221_369930_370226_370335
transcript_69213.known	chr16	-	800	6	FSM	ENSG00000086504.18	ENST00000441883.5	800	6	0	0	0	0	multi-exon	FALSE	canonical	1	90	junction_5	685.248684785312	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTGTCAGAGCCGGCGG	-359475	True	NA	NA	False	NA	NA	NA	370432	367723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_367783_368327_368415_368500_368636_369067_369221_369930_370226_370361
transcript_69214.nnic	chr16	-	1122	6	NNC	ENSG00000086504.18	novel	1524	6	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	1	49	junction_5	697.26063993316	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTATCTTTGCTTT	-359507	True	NA	-20	True	AGTAAA	-16	NA	370464	367393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_367783_368327_368415_368500_368636_369067_369221_369930_370226_370401
transcript_69215.nic	chr16	-	1124	6	NIC	ENSG00000086504.18	novel	1524	6	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	248	junction_5	640.780898591711	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTATCTTTGCTTT	-359551	True	NA	-20	True	AGTAAA	-16	NA	370508	367393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_367783_368327_368415_368500_368636_369067_369221_369930_370226_370443
transcript_69216.known	chr16	-	865	6	FSM	ENSG00000086504.18	ENST00000389675.6	865	6	0	0	0	0	multi-exon	FALSE	canonical	1	100	junction_5	682.346656766192	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACACAGATCCCGGGGAG	-359552	True	NA	NA	False	NA	NA	NA	370509	367612	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_367783_368327_368415_368500_368636_369067_369221_369930_370226_370484
transcript_69218.known	chr16	-	1512	5	FSM	ENSG00000086504.18	ENST00000483764.5	1512	5	0	0	0	0	multi-exon	FALSE	canonical	3	503	junction_4	498.456868745933	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGCTTTGAGGACTGGT	-359552	True	NA	-10	True	AGTAAA	-26	NA	370509	367383	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_367783_368327_368415_368500_369221_369930_370226_370498
transcript_69220.known	chr16	-	2346	13	FSM	ENSG00000129925.11	ENST00000250930.7	2346	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	210.116964781259	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTACTTCCTCCTACTGAG	-376164	True	NA	-5	True	AATAAA	-16	NA	381978	371863	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_372284_372610_372728_374004_374152_374220_374400_374755_374893_375132_375257_375344_375436_376135_376456_376543_376813_377036_377165_377377_377586_377670_377806_381907
transcript_69235.known	chr16	+	1012	9	FSM	ENSG00000242612.7	ENST00000424398.6	1012	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	52.0154724577217	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTGAACACTCAGCTATT	401860	False	NA	NA	False	NA	NA	NA	401881	411976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_402044_404955_405025_406345_406362_407424_407561_410242_410368_410690_410785_410971_411077_411360_411579_411889
transcript_69238.known	chr16	+	1551	9	FSM	ENSG00000242612.7	ENST00000219481.10	1551	9	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_3	26.2651741856017	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTATCGTTTAGGGGTTGT	401863	False	NA	4	True	ATTAAA	-16	NA	401884	412482	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_402044_404955_405025_406345_406398_407424_407561_410242_410368_410690_410785_410971_411077_411360_411579_411889
transcript_6927.known	chr1	+	3456	16	FSM	ENSG00000116871.16	ENST00000316156.8	3456	16	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_5	79.0974083014102	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCCTGTTCTTGGAGCT	NA	False	NA	15	True	AATAAA	-16	NA	36155964	36180849	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_36156464_36170970_36171316_36171512_36171582_36172463_36172628_36173363_36173479_36176198_36176582_36176696_36176843_36177872_36178202_36178418_36178597_36178684_36178824_36178920_36179026_36179261_36179316_36179514_36179558_36179665_36179757_36179873_36180068_36180247
transcript_69280.known	chr16	+	1167	6	FSM	ENSG00000103202.13	ENST00000448828.5	1167	6	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_2	1308.57867933113	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAAGTTTTGCACACCCA	370282	True	NA	-6	True	AGTAAA	-1	NA	397198	400734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_397314_398207_398395_398989_399124_399378_399481_399626_399740_400218
transcript_69289.known	chr16	+	1232	5	FSM	ENSG00000103202.13	ENST00000397722.5	1232	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	1196.79008184393	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACCCAGTTCCATAACGT	396418	True	NA	6	True	AGTAAA	-13	NA	396724	400746	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_397080_398989_399124_399378_399481_399626_399740_400218
transcript_69294.known	chr16	+	966	5	FSM	ENSG00000103202.13	ENST00000433358.5	966	5	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_4	1135.95254632401	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGGTGGTACACTAATTA	370320	True	NA	21	True	ATTAAA	-18	NA	397236	400648	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_397314_398989_399124_399378_399481_399626_399740_400108
transcript_69296.known	chr16	+	1000	5	FSM	ENSG00000103202.13	ENST00000219479.7	1000	5	0	0	0	0	multi-exon	FALSE	canonical	3	2194	junction_1	296.894762500116	1809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCATAACGTTGTTGGAT	370282	True	NA	14	True	AGTAAA	-21	NA	397198	400754	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_397314_398989_399124_399378_399481_399626_399740_400218
transcript_69298.known	chr16	+	1652	5	FSM	ENSG00000103202.13	ENST00000460297.1	1652	5	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	1151.34888283265	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGTGCCCAGCACATGG	370291	True	NA	6	True	ATTAAA	-3	NA	397207	400633	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_397314_398207_399124_399378_399481_399626_399740_400218
transcript_69300.known	chr16	+	904	4	FSM	ENSG00000103202.13	ENST00000621774.4	904	4	0	0	0	0	multi-exon	TRUE	canonical	2	115	junction_2	1075.57560816936	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCCATAACGTTGTTGGA	370275	True	NA	13	True	AGTAAA	-20	NA	397191	400753	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_397314_398989_399124_399626_399740_400218
transcript_69304.known	chr16	+	766	6	FSM	ENSG00000103202.13	ENST00000382940.8	766	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1359.38324250375	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTACCCCAAGCCAGC	370292	True	NA	-39	True	NA	NA	NA	397208	400506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_397314_397878_397903_398989_399124_399378_399481_399626_399740_400218
transcript_69305.known	chr16	-	2253	1	FSM	ENSG00000277142.1	ENST00000622160.1	2253	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTGTGTGCTTGTGGT	NA	False	NA	NA	False	NA	NA	NA	527407	525154	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_525200_527400
transcript_69312.nnic	chr16	+	4663	14	NNC	ENSG00000103326.12	novel	4888	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	5	junction_1	55.7776651446982	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACGCCTCCTCCTCCTGCT	NA	False	NA	17	True	AATAAA	-18	NA	527711	554636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_527872_527982_528030_533945_533999_546816_548288_548992_549202_549287_549472_549614_549839_551301_551428_551511_551665_552050_552213_552300_552531_552604_552772_552862_553042_553338
transcript_69318.nic	chr16	+	4726	13	NIC	ENSG00000103326.12	novel	4888	14	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	103	junction_2	32.9528282380874	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACGCCTCCTCCTCCTGCT	NA	False	NA	17	True	AATAAA	-18	NA	527759	554636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_528030_533945_533999_546816_548288_548992_549202_549287_549472_549614_549839_551301_551428_551511_551665_552050_552213_552300_552531_552604_552772_552862_553042_553338
transcript_69325.known	chr16	+	3174	4	FSM	ENSG00000103326.12	ENST00000567216.5	3174	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	58.8614191696621	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACAGACGTGATGCCGGGC	NA	False	NA	22	True	AATAAA	-14	NA	527747	539858	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_528030_533945_533999_536028_536143_537133
transcript_69329.known	chr16	+	2245	3	FSM	ENSG00000161992.6	ENST00000409413.4	2245	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	5.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGCCGTCTGTGCCTCCTT	560323	True	NA	NA	False	ATTAAA	-17	NA	560393	565529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_560662_563255_564377_564673
transcript_69332.known	chr16	+	2958	11	FSM	ENSG00000007541.17	ENST00000321878.10	2958	11	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_9	25.8125938254953	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCAGGCTCGGTCCCGGGT	567733	True	NA	10	True	AATAAA	-19	NA	569967	584109	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_570097_574065_574764_575838_575971_576133_576255_578378_578506_578784_578939_579068_579181_580182_580264_580857_580973_582247_582310_582882
transcript_69336.known	chr16	+	2846	10	FSM	ENSG00000007541.17	ENST00000026218.9	2846	10	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_9	23.1713957336824	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCAGGCTCGGTCCCGGGT	567783	True	NA	10	True	AATAAA	-19	NA	570017	584109	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_570097_574065_574764_575838_575971_576133_576255_578378_578506_578784_578939_579068_579181_580182_580264_580857_580973_582882
transcript_69346.known	chr16	+	1289	4	FSM	ENSG00000282907.1	ENST00000635107.1	1289	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	62.4179461373089	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGACTGGGGTGGAGCCC	569444	False	NA	NA	False	NA	NA	NA	569460	576257	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_569796_574065_574764_575838_575971_576133
transcript_69351.known	chr16	+	2052	4	FSM	ENSG00000007541.17	ENST00000422307.6	2052	4	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	5.65685424949238	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAAGCTCTTATCCTTTA	567741	True	NA	25	True	TATAAA	-33	NA	569975	577234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_570097_574065_574764_575838_575971_576133
transcript_69355.known	chr16	+	916	3	FSM	ENSG00000282907.1	ENST00000409439.6	916	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	75.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGGCTGGAGCACCTCACG	568805	False	NA	NA	False	NA	NA	NA	568836	575903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_568990_574065_574764_575838
transcript_69356.known	chr16	+	2112	3	FSM	ENSG00000007541.17	ENST00000470411.2	2112	3	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	6	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAAGTCTCTTCCTGCTGC	567827	True	NA	8	True	TATAAA	-16	NA	570061	577217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_570097_574065_574764_575838
transcript_69362.known	chr16	+	2071	2	FSM	ENSG00000257108.2	ENST00000540585.1	2071	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGGGCTGGGGTCTTGT	566973	True	NA	4	True	AATAAA	-16	NA	567004	569495	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_567076_567495
transcript_69364.nic	chr16	+	3307	2	ISM	ENSG00000007541.17	ENST00000422307.6	2052	4	-34	17	-26	0	intron_retention	FALSE	canonical	3	140	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAAGTCTCTTCCTGCTGC	567707	True	NA	8	True	TATAAA	-16	NA	569941	577217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_570097_574065
transcript_69366.nic	chr16	+	3686	2	ISM	ENSG00000007541.17	ENST00000422307.6	2052	4	-34	-362	-26	362	intron_retention	FALSE	canonical	3	140	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTCTTTTCTCCTTCTTG	567707	True	NA	NA	False	AAAACA	-33	NA	569941	577596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_570097_574065
transcript_69367.known	chr16	+	1775	2	FSM	ENSG00000007541.17	ENST00000476438.1	1775	2	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGCAGGCTCGGTCCCGGG	581746	False	NA	9	True	AATAAA	-18	NA	581760	584108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_582310_582882
transcript_69368.known	chr16	+	2096	2	FSM	ENSG00000257108.2	ENST00000424439.3	2096	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGGGCTGGGGTCTTGT	566973	True	NA	4	True	AATAAA	-16	NA	567004	569495	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_567076_567470
transcript_69373.known	chr16	+	2717	7	FSM	ENSG00000197562.10	ENST00000535977.5	2717	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	75.7055700284552	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTTTTGCTGTGTCTGGTG	589136	True	NA	30	True	AGTAAA	-22	NA	589356	629271	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_589548_590260_590434_617207_617269_618199_618261_625431_625510_625898_626122_627341
transcript_69375.known	chr16	+	753	7	FSM	ENSG00000197562.10	ENST00000566290.5	753	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	78.2206636524021	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCCGTCACCATCAAGAG	589630	True	NA	NA	False	NA	NA	NA	589668	627415	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_589752_590260_590434_617207_617269_618199_618261_625431_625510_625898_626122_627341
transcript_69377.known	chr16	+	2569	7	FSM	ENSG00000197562.10	ENST00000538492.5	2569	7	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	49.7113892606334	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTTTTGCTGTGTCTGGTG	588761	True	NA	30	True	AGTAAA	-22	NA	590076	629271	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_590120_590260_590434_617207_617269_618199_618261_625431_625510_625898_626122_627341
transcript_6938.known	chr1	-	1056	5	FSM	ENSG00000054116.12	ENST00000373162.5	1056	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	212.927804666277	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACTGCGATATAGTCCAT	-36146462	True	NA	-24	True	AATAAA	-4	NA	36149497	36137053	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_36137323_36137795_36137979_36139719_36139820_36140068_36140167_36149091
transcript_69383.nnic	chr16	+	2464	5	NIC	ENSG00000197562.10	novel	2569	7	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_2	89.4158123600071	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACGTTTTGCTGTGTCTG	588741	True	NA	27	True	AGTAAA	-19	NA	590056	629268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_590120_590260_590434_625431_625510_625898_626122_627341
transcript_69385.known	chr16	+	1976	2	FSM	ENSG00000127578.7	ENST00000319070.3	1976	2	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	0	321	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGGCTTGCTGCTGCT	629792	True	NA	8	True	AATAAA	-21	NA	630984	634117	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_631425_632581
transcript_69386.known	chr16	+	2718	6	FSM	ENSG00000197562.10	ENST00000248139.8	2718	6	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_3	22.3839228018683	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACGTTTTGCTGTGTCTG	588750	True	NA	27	True	AGTAAA	-19	NA	590065	629268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_590434_617207_617269_618199_618261_625431_625510_625898_626122_627341
transcript_6939.known	chr1	-	1282	5	FSM	ENSG00000054116.12	ENST00000373166.8	1282	5	0	0	0	0	multi-exon	FALSE	canonical	3	476	junction_4	35.5598087733891	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTCCTGTTTTCTTTCT	-36146451	True	NA	-2	True	AATAAA	-26	NA	36149486	36136571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_36137323_36137795_36137979_36139719_36139820_36140068_36140167_36149336
transcript_69390.known	chr16	-	797	6	FSM	ENSG00000130731.16	ENST00000301686.13	797	6	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_4	329.291117402216	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGGTGTCTGCCCCAC	-616793	True	NA	-18	True	AATAAA	-18	NA	636305	634429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_634645_634718_634798_634888_634957_635280_635341_635611_635775_636093
transcript_69395.known	chr16	-	755	6	FSM	ENSG00000130731.16	ENST00000456420.6	755	6	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_3	414.677899097601	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGACAGCCCCACCCAGTC	-616727	True	NA	-101	True	NA	NA	NA	636239	634512	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_634645_634718_634798_634888_635064_635280_635341_635611_635775_636093
transcript_69398.known	chr16	-	588	5	FSM	ENSG00000130731.16	ENST00000568077.5	588	5	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_4	358.249563851793	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCAGTCTGTGCTCTCAG	-616819	True	NA	-90	True	NA	NA	NA	636331	634501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_634645_634718_634798_634888_634957_635280_635341_636093
transcript_69399.known	chr16	-	801	5	FSM	ENSG00000130731.16	ENST00000614890.4	801	5	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_3	476.879112039938	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGTCTGCCCCACCTC	-616854	True	NA	-15	True	AATAAA	-21	NA	636366	634426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_634645_634718_634798_634888_634957_635611_635775_636093
transcript_6940.known	chr1	-	1336	5	FSM	ENSG00000054116.12	ENST00000616395.4	1336	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	215.444888544611	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCCTGTTTTCTTTCTGC	-36149494	False	NA	0	True	AATAAA	-28	NA	36149514	36136569	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_36137323_36137795_36137979_36139719_36139844_36140068_36140167_36149336
transcript_69402.known	chr16	-	518	5	FSM	ENSG00000130731.16	ENST00000564039.1	518	5	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_3	464.767683902399	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATGCCTGATCTTCCGG	-616766	True	NA	NA	False	NA	NA	NA	636278	634625	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_634645_634718_634798_634888_635064_635280_635341_636093
transcript_69407.known	chr16	-	726	5	FSM	ENSG00000130731.16	ENST00000397666.6	726	5	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_2	447.374214165278	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGGTGTCTGCCCCAC	-616790	True	NA	-18	True	AATAAA	-18	NA	636302	634429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_634645_634718_634798_635280_635341_635611_635775_636093
transcript_69411.known	chr16	-	604	4	FSM	ENSG00000130731.16	ENST00000397664.8	604	4	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_2	520.944228194237	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCGGCTTGCTGGTGTC	-616839	True	NA	-26	True	AATAAA	-10	NA	636351	634437	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_634645_634718_634798_635280_635341_636093
transcript_69413.known	chr16	-	558	4	FSM	ENSG00000130731.16	ENST00000397665.6	558	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	550.675544722621	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGGACCTTGTGGACGACA	-616778	True	NA	-114	True	NA	NA	NA	636290	634525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_634645_634718_634798_635611_635775_636093
transcript_69415.known	chr16	-	544	3	FSM	ENSG00000130731.16	ENST00000338401.8	544	3	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_2	614.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGTGTCTGCCCCACC	-616830	True	NA	-17	True	AATAAA	-19	NA	636342	634428	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_634645_634718_634798_636093
transcript_69418.known	chr16	-	1710	3	FSM	ENSG00000130731.16	ENST00000448973.6	1710	3	0	0	0	0	multi-exon	FALSE	canonical	3	921	junction_2	228	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCGGCTTGCTGGTGTCTG	-616798	True	NA	-24	True	AATAAA	-12	NA	636310	634435	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_634645_634718_634798_634888
transcript_69419.known	chr16	+	1050	6	FSM	ENSG00000172366.20	ENST00000491999.5	1050	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	175.418813130177	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGAGTGTCTTTGACT	635729	True	NA	22	True	AATAAA	-15	NA	641845	648474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_642044_642119_642250_646471_646609_647416_647545_647782_647885_648119
transcript_69425.known	chr16	+	931	5	FSM	ENSG00000172366.20	ENST00000307650.9	931	5	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_1	49.0433481728154	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGAGTGTCTTTGACT	635711	True	NA	22	True	AATAAA	-15	NA	641827	648474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_642044_642119_642250_647416_647545_647782_647885_648119
transcript_69431.known	chr16	+	702	4	FSM	ENSG00000172366.20	ENST00000474840.5	702	4	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	203.853433187234	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGAGTGTCTTTGACT	635812	True	NA	22	True	AATAAA	-15	NA	641928	648474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_642044_642119_642250_647782_647885_648119
transcript_69434.known	chr16	+	727	2	FSM	ENSG00000172366.20	ENST00000619377.1	727	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGGGGGCAGGGGTGGGG	636715	False	NA	NA	False	NA	NA	NA	636816	638620	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_636946_638022
transcript_69435.known	chr16	+	1379	5	FSM	ENSG00000172366.20	ENST00000615744.4	1379	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	213.512733812295	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGGAGCTCCAGGCTAAT	642362	False	NA	-15	True	GGGGCT	-5	NA	642450	648437	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_643145_646471_646609_647416_647545_647782_647885_648119
transcript_69444.known	chr16	+	2490	19	FSM	ENSG00000140983.14	ENST00000315082.9	2490	19	0	0	0	0	multi-exon	FALSE	canonical	3	637	junction_10	175.760569462487	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTGTTGTTTGTCTTTA	643613	True	NA	65	True	NA	NA	NA	668131	674171	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_668237_668352_668412_668487_668570_668655_668700_669552_669607_670122_670176_670248_670358_670455_670558_670674_670774_670891_671001_671082_671204_671696_671782_671859_672003_672083_672182_672253_672385_672488_672567_672702_672826_672927_673131_673479
transcript_6947.known	chr1	-	1114	3	FSM	ENSG00000054116.12	ENST00000616074.4	1114	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	260	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCCTGTTTTCTTTCTGC	-36149494	False	NA	0	True	AATAAA	-28	NA	36149514	36136569	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_36137323_36137795_36137979_36149336
transcript_69478.nic	chr16	+	2595	18	NIC	ENSG00000140983.14	novel	2490	19	NA	NA	-42	0	intron_retention	TRUE	canonical	3	897	junction_9	113.357260517846	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCGGATCCCAGTCTCTG	668052	False	NA	19	True	ATTAAA	-19	NA	668062	674125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_668237_668352_668412_668487_668570_668655_668700_669552_669607_670122_670176_670248_670358_670455_670558_670674_670774_670891_671204_671696_671782_671859_672003_672083_672182_672253_672385_672488_672567_672702_672826_672927_673131_673479
transcript_69486.nic	chr16	+	2414	18	NIC	ENSG00000140983.14	novel	2490	19	NA	NA	-42	0	intron_retention	FALSE	canonical	3	40	junction_8	322.165080510514	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCGGATCCCAGTCTCTG	668052	False	NA	19	True	ATTAAA	-19	NA	668062	674125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_668237_668352_668412_668487_668570_668655_668700_669552_669607_670122_670176_670248_670358_670455_670558_670891_671001_671082_671204_671696_671782_671859_672003_672083_672182_672253_672385_672488_672567_672702_672826_672927_673131_673479
transcript_6949.known	chr1	-	221	2	FSM	ENSG00000054116.12	ENST00000469757.1	221	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCCGGATGAGATTCATC	-36146461	True	NA	NA	False	NA	NA	NA	36149496	36137261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_36137323_36149336
transcript_69492.nic	chr16	+	2459	18	NIC	ENSG00000140983.14	novel	2490	19	NA	NA	-42	0	intron_retention	FALSE	canonical	3	182	junction_4	300.988383364566	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCGGATCCCAGTCTCTG	668052	False	NA	19	True	ATTAAA	-19	NA	668062	674125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_668237_668352_668412_668487_668570_668655_668700_670122_670176_670248_670358_670455_670558_670674_670774_670891_671001_671082_671204_671696_671782_671859_672003_672083_672182_672253_672385_672488_672567_672702_672826_672927_673131_673479
transcript_69494.known	chr16	+	2559	18	FSM	ENSG00000140983.14	ENST00000569675.5	2559	18	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_5	294.246383590445	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTTTGTCTTTATGT	643616	True	NA	68	True	NA	NA	NA	668134	674174	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_668237_668352_668412_668487_668700_669552_669607_670122_670176_670265_670358_670455_670558_670674_670774_670891_671001_671082_671204_671696_671782_671859_672003_672083_672182_672253_672385_672488_672567_672702_672826_672927_673131_673479
transcript_69523.nic	chr16	+	2614	17	NIC	ENSG00000140983.14	novel	2490	19	NA	NA	-42	0	intron_retention	FALSE	canonical	3	107	junction_8	289.080161622603	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCGGATCCCAGTCTCTG	668052	False	NA	19	True	ATTAAA	-19	NA	668062	674125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_668237_668352_668412_668487_668570_668655_668700_669552_669607_670122_670176_670248_670358_670455_670558_670773_671204_671696_671782_671859_672003_672083_672182_672253_672385_672488_672567_672702_672826_672927_673131_673479
transcript_69533.nic	chr16	+	2541	17	NIC	ENSG00000140983.14	novel	2490	19	NA	NA	-42	0	intron_retention	FALSE	canonical	3	182	junction_4	280.627867468646	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCGGATCCCAGTCTCTG	668052	False	NA	19	True	ATTAAA	-19	NA	668062	674125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_668237_668352_668412_668487_668570_668655_668700_670122_670176_670248_670358_670455_670558_670674_670774_670891_671204_671696_671782_671859_672003_672083_672182_672253_672385_672488_672567_672702_672826_672927_673131_673479
transcript_6954.known	chr1	+	4405	12	FSM	ENSG00000054118.15	ENST00000354618.10	4405	12	0	0	0	0	multi-exon	FALSE	canonical	1	127	junction_4	113.786301082554	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTTCTGTTCATTGTCAT	36178141	True	NA	13	True	AATAAA	-24	NA	36224442	36305357	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_36224506_36259381_36259485_36282532_36282701_36286367_36287271_36289059_36289765_36291373_36291547_36292597_36292710_36293850_36293936_36296582_36296771_36300885_36301085_36301552_36301697_36303795
transcript_6956.nic	chr1	+	2834	11	ISM	ENSG00000054118.15	ENST00000354618.10	4405	12	-46	3716	-35	-2507	5prime_fragment	FALSE	canonical	1	127	junction_4	117.633371115513	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGGAAGAGGAGTGGGACC	36178095	True	NA	NA	False	AAAAAG	-4	NA	36224396	36301641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_36224506_36259381_36259485_36282532_36282701_36286367_36287271_36289059_36289765_36291373_36291547_36292597_36292710_36293850_36293936_36296582_36296771_36300885_36301085_36301552
transcript_696.known	chr1	+	1257	8	FSM	ENSG00000169972.12	ENST00000379031.10	1257	8	0	0	0	0	multi-exon	TRUE	canonical	3	332	junction_1	29.9829883740219	202	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAGTTTGTTTCTTCAGC	1304240	True	NA	17	True	AATAAA	-17	NA	1308596	1311677	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1308721_1308914_1308973_1309085_1309274_1309453_1309604_1309680_1309852_1310633_1310689_1310908_1311072_1311329
transcript_6963.nic	chr1	+	2402	9	ISM	ENSG00000054118.15	ENST00000354618.10	4405	12	-27	8712	-16	2476	5prime_fragment	FALSE	canonical	1	127	junction_4	116.356134346239	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAAGGAGAGAGATCTTAA	36178114	True	NA	-54	True	NA	NA	NA	36224415	36296645	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_36224506_36259381_36259485_36282532_36282701_36286367_36287271_36289059_36289765_36291373_36291547_36292597_36292710_36293850_36293936_36296582
transcript_6968.known	chr1	+	3339	13	FSM	ENSG00000054118.15	ENST00000469141.6	3339	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	187.07039673164	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTACCGCGAGAGGCATCC	36178130	True	NA	NA	False	NA	NA	NA	36224431	36304148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_36224506_36224970_36225103_36259381_36259485_36282532_36282701_36286367_36287271_36289059_36289765_36291373_36291547_36292597_36292710_36293850_36293936_36296582_36296771_36300885_36301085_36301552_36301697_36303795
transcript_6969.nic	chr1	+	2367	7	ISM	ENSG00000054118.15	ENST00000354618.10	4405	12	-156	12664	-145	-1476	5prime_fragment	FALSE	canonical	1	127	junction_4	131.627525827828	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCAGAGATACACAGGTAA	NA	False	NA	NA	False	AAGAAA	-2	NA	36224286	36292693	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_36224506_36259381_36259485_36282532_36282701_36286367_36287271_36289059_36289765_36291373_36291547_36292597
transcript_69704.known	chr16	+	1044	9	FSM	ENSG00000140983.14	ENST00000561983.5	1044	9	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_8	471.906240687703	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGAGTGATGCCGGGG	643586	True	NA	NA	False	NA	NA	NA	668104	671199	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_668237_668352_668412_668487_668570_668655_668700_669552_669607_670122_670176_670265_670358_670455_670558_670773
transcript_69705.known	chr16	+	1458	8	FSM	ENSG00000103269.14	ENST00000352681.8	1458	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	4.70345075232981	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGGGGCTGTCCCGGGCT	675631	False	NA	9	True	AATAAA	-15	NA	675670	678268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_675830_676335_676498_676671_676897_676970_677120_677275_677389_677458_677560_677638_677700_677780
transcript_69706.known	chr16	+	1560	7	FSM	ENSG00000103269.14	ENST00000219551.2	1560	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	3.71558280160133	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGGGGCTGTCCCGGGCT	676043	False	NA	9	True	AATAAA	-15	NA	676074	678268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_676498_676671_676897_676970_677120_677275_677389_677458_677560_677638_677700_677780
transcript_69709.known	chr16	-	1934	9	FSM	ENSG00000161999.13	ENST00000609261.6	1934	9	0	0	0	0	multi-exon	FALSE	canonical	3	459	junction_8	44.8518394271629	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTGTCGGGAGTCGGTG	-677232	True	NA	-12	True	AGTAAA	-14	NA	684334	681669	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_682875_682952_683088_683166_683235_683321_683442_683529_683599_683684_683782_683860_683910_684065_684156_684233
transcript_69710.known	chr16	-	823	8	FSM	ENSG00000161999.13	ENST00000562111.1	823	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	178.06637148283	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGATCACGGCCCAGCAAAA	-677244	True	NA	NA	False	NA	NA	NA	684346	682657	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_682875_683166_683235_683321_683442_683529_683599_683684_683782_683860_683910_684065_684156_684233
transcript_69712.known	chr16	-	1015	8	FSM	ENSG00000161999.13	ENST00000562824.5	1015	8	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_7	182.609989220922	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCCTGGACCAGGACGC	-684352	False	NA	NA	False	CATAAA	-33	NA	684363	682527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_682875_682952_683088_683166_683235_683321_683442_683529_683599_683684_683782_683860_683910_684233
transcript_69713.nic	chr16	-	2113	8	NIC	ENSG00000161999.13	novel	1934	9	NA	NA	5	0	intron_retention	FALSE	canonical	3	459	junction_7	47.7865150477429	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTGTGTCGGGAGTCGGT	-677256	True	NA	-13	True	AGTAAA	-13	NA	684358	681670	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_682875_682952_683088_683166_683235_683321_683442_683529_683599_683684_683782_683860_684156_684233
transcript_69714.nic	chr16	-	2120	8	NIC	ENSG00000161999.13	novel	1934	9	NA	NA	-51	0	intron_retention	FALSE	canonical	3	48	junction_6	176.397973055132	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTGTGTCGGGAGTCGGT	-684403	False	NA	-13	True	AGTAAA	-13	NA	684414	681670	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_682875_682952_683088_683166_683235_683321_683442_683529_683599_683684_683782_683909_684156_684233
transcript_69715.nic	chr16	-	2032	8	NIC	ENSG00000161999.13	novel	1934	9	NA	NA	-8	0	intron_retention	FALSE	canonical	3	459	junction_7	47.1363631890908	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTGTGTCGGGAGTCGGT	-677252	True	NA	-13	True	AGTAAA	-13	NA	684354	681670	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_682875_682952_683088_683166_683235_683321_683442_683529_683599_683684_683910_684065_684156_684233
transcript_69716.known	chr16	-	1998	8	FSM	ENSG00000161999.13	ENST00000568689.5	1998	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	184.347387243957	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCTTGCCAGTAAAGCCT	-677242	True	NA	-41	True	NA	NA	NA	684344	681698	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_682875_682957_683088_683166_683235_683321_683599_683684_683782_683860_683910_684065_684156_684233
transcript_69718.known	chr16	+	1340	7	FSM	ENSG00000103266.11	ENST00000219548.9	1340	7	0	0	0	0	multi-exon	FALSE	canonical	3	1110	junction_4	63.7636695584214	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGGTGGAGATGAAGACG	674773	True	NA	15	True	NA	NA	NA	680409	682801	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_680685_681151_681351_681437_681604_681792_681881_682019_682077_682164_682282_682363
transcript_69722.known	chr16	+	1560	7	FSM	ENSG00000103266.11	ENST00000565677.5	1560	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	454.75246624461	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGGACGTGCTGGTGTGT	679203	False	NA	24	True	AATAAA	-15	NA	680223	682746	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_680685_681062_681351_681437_681604_681792_681881_682019_682077_682164_682282_682363
transcript_69736.known	chr16	-	1428	7	FSM	ENSG00000161999.13	ENST00000569441.5	1428	7	0	0	0	0	multi-exon	FALSE	canonical	3	459	junction_6	51.4673575083168	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCAGGGGGCTCCGGGTCA	-677218	True	NA	NA	False	NA	NA	NA	684320	682405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_682875_682952_683088_683166_683235_683321_683599_683684_683782_683860_684156_684233
transcript_69737.nic	chr16	-	2148	7	NIC	ENSG00000161999.13	novel	1934	9	NA	NA	-8	0	intron_retention	FALSE	canonical	3	48	junction_5	188.401536323059	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTGTGTCGGGAGTCGGT	-677252	True	NA	-13	True	AGTAAA	-13	NA	684354	681670	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_682875_682952_683088_683166_683235_683321_683599_683684_683782_683909_684156_684233
transcript_69747.nic	chr16	+	1731	6	ISM	ENSG00000103266.11	ENST00000219548.9	1340	7	-364	55	-178	0	intron_retention	FALSE	canonical	3	1110	junction_4	50.1876478827211	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGGACGTGCTGGTGTGT	680014	False	NA	24	True	AATAAA	-15	NA	680045	682746	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_680685_681151_681351_681437_681604_681792_681881_682019_682077_682164
transcript_69749.known	chr16	+	743	6	FSM	ENSG00000103266.11	ENST00000567173.5	743	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	469.770752601734	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGATCAGCTTTGAGCTGA	674787	True	NA	NA	False	NA	NA	NA	680423	682193	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_680685_681208_681351_681437_681604_681792_681881_682019_682077_682164
transcript_69760.known	chr16	-	1975	6	FSM	ENSG00000161999.13	ENST00000565302.5	1975	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	212.002452815999	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTGCCAGTAAAGCCTT	-677234	True	NA	-40	True	NA	NA	NA	684336	681697	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_683088_683166_683235_683321_683442_683529_683599_683684_683910_684233
transcript_69771.known	chr16	+	894	4	FSM	ENSG00000103266.11	ENST00000563505.5	894	4	0	0	0	0	multi-exon	FALSE	canonical	3	1140	junction_1	43.4076286178158	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGGAAGGTGAGTGTGT	674793	True	NA	NA	False	NA	NA	NA	680429	682066	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_680685_681151_681351_681437_681604_681792
transcript_69777.known	chr16	+	1853	5	FSM	ENSG00000103266.11	ENST00000569248.5	1853	5	0	0	0	0	multi-exon	FALSE	canonical	3	1211	junction_3	36.4031248658683	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTGTGTAATAAAATCCG	674782	True	NA	-5	True	NA	NA	NA	680418	682717	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_681351_681437_681604_681792_682077_682164_682282_682363
transcript_6978.known	chr1	+	3825	14	FSM	ENSG00000054118.15	ENST00000648638.1	3825	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	200.219731366323	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTTCTGTTCATTGTCAT	36178131	True	NA	13	True	AATAAA	-24	NA	36224432	36305357	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_36224506_36225411_36225464_36259381_36259485_36282532_36282701_36286367_36287271_36289059_36289765_36291373_36291547_36292597_36292710_36293850_36293936_36296582_36296771_36300885_36301085_36301552_36301697_36303795_36303832_36304473
transcript_69780.known	chr16	-	3243	9	FSM	ENSG00000127580.17	ENST00000293883.9	3243	9	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_6	17.8448171747429	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGGCACTGCGTGTCACC	-688948	True	NA	-8	True	AATAAA	-15	NA	690398	684621	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_684903_684991_685177_685256_685598_685678_685784_685868_685991_686067_686187_686743_687417_687561_687740_689159
transcript_69783.nnic	chr16	-	3231	9	NNC	ENSG00000127580.17	novel	3243	9	NA	NA	13	0	intron_retention	FALSE	canonical	3	6	junction_3	68.2796409993491	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGGCACTGCGTGTCACC	-688981	True	NA	-8	True	AATAAA	-15	NA	690431	684621	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_684903_684991_685177_685256_685598_685723_685784_685868_685991_686067_686187_686743_687417_687561_687740_689159
transcript_69784.nic	chr16	-	3353	8	NIC	ENSG00000127580.17	novel	3243	9	NA	NA	13	0	intron_retention	FALSE	canonical	3	186	junction_5	18.5758236557574	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGGCACTGCGTGTCACC	-688981	True	NA	-8	True	AATAAA	-15	NA	690431	684621	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_684903_684991_685177_685256_685598_685678_685784_685868_686187_686743_687417_687561_687740_689159
transcript_69797.known	chr16	-	3519	6	FSM	ENSG00000127585.12	ENST00000397621.6	3519	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	51.8189154653009	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGAGTTGTTTTTAG	-705211	True	NA	-2	True	ATTAAA	-16	NA	705801	692499	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_694424_694633_694698_694991_695077_695414_695924_696772_697420_705511
transcript_69799.nic	chr16	-	2184	4	NIC	ENSG00000127585.12	novel	3519	6	NA	NA	-63	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_3	30.4740326617051	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGAGTTGTTTTTAG	-695315	False	557	-2	True	ATTAAA	-16	NA	695326	692499	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_694424_694633_694698_694991_695077_695215
transcript_69800.nnic	chr16	-	2159	4	NNC	ENSG00000127585.12	novel	3519	6	NA	NA	-63	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_3	41.2983723112129	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGAGTTGTTTTTAG	-695315	False	557	-2	True	ATTAAA	-16	NA	695326	692499	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_694424_694633_694698_694991_695077_695240
transcript_69805.known	chr16	+	503	4	FSM	ENSG00000103260.9	ENST00000570132.1	503	4	0	0	0	0	multi-exon	FALSE	canonical	2	34	junction_1	134.038137193197	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCACCTTCCTCTTCATG	713595	False	NA	NA	False	GGGGCT	-45	NA	715236	717247	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_715394_715875_715985_716932_716993_717070
transcript_69806.known	chr16	+	3322	4	FSM	ENSG00000103260.9	ENST00000568223.7	3322	4	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_1	25.8241919309954	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTGGCATGCATCTGTA	713476	True	NA	NA	False	AATAAA	-20	NA	715117	719655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_715394_715583_715985_716932_716993_717070
transcript_69807.known	chr16	+	915	3	FSM	ENSG00000103260.9	ENST00000219542.3	915	3	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_1	22.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGTGCTGGGGAGGGGC	713696	False	NA	-85	True	NA	NA	NA	715337	717390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_715394_715583_715985_716932
transcript_69810.known	chr16	-	1585	14	FSM	ENSG00000162004.19	ENST00000345165.10	1585	14	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_6	16.0221739839386	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTCTTTATCGTGTCTA	-725980	False	NA	1	True	CATAAA	-23	NA	726443	722581	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_722790_722921_723023_723094_723162_723856_723937_724105_724206_724321_724510_724680_724807_724910_724990_725077_725146_725236_725294_725412_725581_725793_725881_725965_726086_726307
transcript_69816.known	chr16	-	1847	13	FSM	ENSG00000162004.19	ENST00000466708.5	1847	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_12	15.8210478652824	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCACAGAGTCTTTATCG	-726417	False	463	-5	True	CATAAA	-17	NA	726880	722587	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_722790_722921_723023_723094_723162_723856_723937_724105_724206_724321_724807_724910_724990_725077_725146_725236_725294_725445_725581_725793_725881_725965_726086_726614
transcript_6983.nic	chr1	+	1472	5	ISM	ENSG00000054118.15	ENST00000354618.10	4405	12	-156	16219	-145	-5031	5prime_fragment	FALSE	canonical	1	127	junction_4	147.04591119783	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAAGGGAGCTTCTCTGA	NA	False	NA	68	True	AATAAA	-2	NA	36224286	36289138	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_36224506_36259381_36259485_36282532_36282701_36286367_36287271_36289059
transcript_69842.nic	chr16	-	2921	11	NIC	ENSG00000103245.14	novel	3212	10	NA	NA	8	0	intron_retention	FALSE	canonical	3	19	junction_10	45.0488623607744	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGCCTACGAAAACAGCTCC	-739204	True	NA	-14	True	AATAAA	-18	NA	740926	729765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_730656_730842_731001_731564_731703_732300_732374_733297_733428_734228_734348_734736_734872_736265_736399_737185_737330_739642_739739_740021
transcript_69845.known	chr16	-	2095	11	FSM	ENSG00000103245.14	ENST00000251588.7	2095	11	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_5	20.8844439715306	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCCTACGAAAACAGCTCCT	-739275	True	NA	-13	True	AATAAA	-19	NA	740997	729764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_730656_730842_731001_731564_731703_732300_732374_733297_733428_734228_734348_734736_734872_736265_736399_737185_737330_739642_739739_740919
transcript_69874.nic	chr16	+	1390	9	NIC	ENSG00000103253.19	novel	1512	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	104.209824392905	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCAGTGTTGGCAGATG	726810	False	NA	9	True	AATAAA	-14	NA	726956	729715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_727141_727411_727615_727964_728030_728115_728234_728315_728425_728503_728605_728793_728896_729008_729089_729287
transcript_69888.known	chr16	+	1512	8	FSM	ENSG00000103253.19	ENST00000389703.8	1512	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	98.4054503219269	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCAGTGTTGGCAGATG	726874	True	NA	9	True	AATAAA	-14	NA	727105	729715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_727615_727964_728030_728115_728234_728315_728425_728503_728605_728793_728896_729008_729089_729287
transcript_69904.known	chr16	+	1041	7	FSM	ENSG00000103253.19	ENST00000561546.5	1041	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	90.5348306209028	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGAGGCTGCTCATTAAG	727230	False	NA	NA	False	NA	NA	NA	727245	729185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_727615_727964_728030_728115_728234_728315_728425_728503_728605_728793_728896_729008
transcript_69908.known	chr16	+	1295	7	FSM	ENSG00000103253.19	ENST00000389701.9	1295	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	105.423616371707	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCAGTGTTGGCAGATG	726312	False	NA	9	True	AATAAA	-14	NA	727404	729715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_727615_727964_728030_728115_728425_728503_728605_728793_728896_729008_729089_729287
transcript_6993.nnic	chr1	+	1250	4	NIC	ENSG00000054118.15	novel	4405	12	NA	NA	-26	-5031	combination_of_known_splicesites	FALSE	canonical	1	43	junction_1	191.191003972467	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAAGGGAGCTTCTCTGA	36178104	True	NA	68	True	AATAAA	-2	NA	36224405	36289138	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_36224506_36282532_36282701_36286367_36287271_36289059
transcript_69931.known	chr16	+	870	5	FSM	ENSG00000103254.10	ENST00000569529.6	870	5	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	25.0798724079689	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACTCATGTTTTATGG	719552	True	NA	17	True	GATAAA	-17	NA	721145	722590	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_721437_721597_721703_721800_721942_722083_722135_722308
transcript_69936.known	chr16	+	806	4	FSM	ENSG00000103254.10	ENST00000219535.7	806	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	89.4514144972317	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTCTGTGGGTTCTATCC	719548	True	NA	0	True	NA	NA	NA	721141	722573	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_721437_721597_721703_721800_721942_722308
transcript_69937.known	chr16	+	800	4	FSM	ENSG00000103254.10	ENST00000566437.1	800	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	87.6444838854993	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAGTTCTGCCCCCATCC	721213	False	NA	-65	True	NA	NA	NA	721224	722508	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_721437_721597_721703_721800_722084_722308
transcript_69939.known	chr16	+	740	4	FSM	ENSG00000103253.19	ENST00000568141.5	740	4	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	1.63299316185545	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGAGCGGGCCTGGGCCCT	726253	False	NA	NA	False	NA	NA	NA	727345	728603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_727615_727964_728030_728115_728234_728315
transcript_69943.known	chr16	+	908	3	FSM	ENSG00000103254.10	ENST00000564640.5	908	3	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	31	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTGCTGGAGGACAAGCTG	719552	True	NA	NA	False	NA	NA	NA	721145	722312	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_721437_721597_721703_721800
transcript_69946.known	chr16	+	675	3	FSM	ENSG00000103253.19	ENST00000561750.1	675	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	62	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGCCTGGAGGGCAGCGC	726182	True	NA	NA	False	NA	NA	NA	727274	728532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_727615_728115_728234_728315
transcript_69949.known	chr16	-	3212	10	FSM	ENSG00000103245.14	ENST00000540986.5	3212	10	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_5	21.8428732338745	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGCCTACGAAAACAGCTCC	-739212	True	NA	-14	True	AATAAA	-18	NA	740934	729765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_730656_730842_731001_731564_731703_732300_732374_733297_733428_734228_734348_734736_734872_736265_736399_737185_737330_739642
transcript_69953.known	chr16	+	3092	22	FSM	ENSG00000127586.17	ENST00000262315.14	3092	22	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_8	111.130941541051	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGTGCGAGTGGAGTGGG	776820	True	NA	23	True	TATAAA	-23	NA	788619	798074	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_788776_788930_789126_789209_789361_789546_789716_790176_790270_790346_790400_790524_790667_791160_791371_791850_791949_792223_792348_792438_792591_792717_792812_792965_793065_793143_793275_794053_794202_795131_795357_795684_795835_795946_796078_796716_796862_796960_797093_797693_797752_797838
transcript_69960.nnic	chr16	+	2878	21	NIC	ENSG00000127586.17	novel	3092	22	NA	NA	-11	0	combination_of_known_splicesites	TRUE	canonical	3	65	junction_15	142.93236162605	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGTGCGAGTGGAGTGGG	776809	True	NA	23	True	TATAAA	-23	NA	788608	798074	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_788776_788930_789126_789209_789361_789546_789716_790176_790270_790346_790400_790524_790667_791160_791371_791850_791949_792223_792348_792438_792591_792717_792812_792965_793065_793143_793275_794053_794202_795684_795835_795946_796078_796716_796862_796960_797093_797693_797752_797838
transcript_69965.nic	chr16	+	3005	21	NIC	ENSG00000127586.17	novel	3092	22	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_8	127.677278714735	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGTGCGAGTGGAGTGGG	776809	True	NA	23	True	TATAAA	-23	NA	788608	798074	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_788776_788930_789126_789209_789361_789546_789716_790176_790270_790346_790400_790524_790667_791160_791371_792223_792348_792438_792591_792717_792812_792965_793065_793143_793275_794053_794202_795131_795357_795684_795835_795946_796078_796716_796862_796960_797093_797693_797752_797838
transcript_69969.nic	chr16	+	3597	21	NIC	ENSG00000127586.17	novel	3092	22	NA	NA	-11	0	intron_retention	FALSE	canonical	3	261	junction_7	106.590466271614	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGTGCGAGTGGAGTGGG	776809	True	NA	23	True	TATAAA	-23	NA	788608	798074	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_788776_788930_789126_789209_789361_789546_789716_790176_790270_790346_790400_790524_791371_791850_791949_792223_792348_792438_792591_792717_792812_792965_793065_793143_793275_794053_794202_795131_795357_795684_795835_795946_796078_796716_796862_796960_797093_797693_797752_797838
transcript_69973.known	chr16	+	3172	21	FSM	ENSG00000127586.17	ENST00000455171.6	3172	21	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_7	113.525889117857	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGTGCGAGTGGAGTGGG	776824	True	NA	23	True	TATAAA	-23	NA	788623	798074	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_788776_788930_789361_789546_789716_790176_790270_790346_790400_790524_790667_791160_791371_791850_791949_792223_792348_792438_792591_792717_792812_792965_793065_793143_793275_794053_794202_795131_795357_795684_795835_795946_796078_796716_796862_796960_797093_797693_797752_797838
transcript_69991.known	chr16	+	4494	19	FSM	ENSG00000127586.17	ENST00000471202.5	4494	19	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	138.159328313364	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACGTGCGAGTGGAGTG	776835	True	NA	21	True	TATAAA	-21	NA	788634	798072	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_788776_788930_789126_789209_789361_789546_789716_790006_790270_790346_790400_790524_792348_792438_792591_792717_792812_792965_793065_793143_793275_794053_794202_795131_795357_795684_795835_795946_796078_796716_796862_796960_797093_797693_797752_797838
transcript_7.known	ERCC-00022	+	735	1	FSM	ERCC-00022A	DQ855004	735	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00022_+_0_700
transcript_70.known	SIRV1	-	670	5	FSM	SIRV1A	SIRV105	670	5	0	0	0	0	multi-exon	FALSE	canonical	3	1761	junction_4	2566.82264677558	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCTGGAAGTCAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	10640	6449	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV1_-_6474_6560_6814_7552_7815_10282_10367_10593
transcript_70001.nic	chr16	+	4352	19	NIC	ENSG00000127586.17	novel	3092	22	NA	NA	-11	0	intron_retention	FALSE	canonical	3	371	junction_3	85.1425275640793	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGTGCGAGTGGAGTGGG	776809	True	NA	23	True	TATAAA	-23	NA	788608	798074	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_788776_788930_789126_789209_789361_789546_789716_790176_790270_790346_790400_790524_792348_792438_792591_792717_792812_792965_793065_793143_793275_794053_794202_795131_795357_795684_795835_795946_796078_796716_796862_796960_797093_797693_797752_797838
transcript_7001.known	chr1	+	2544	16	FSM	ENSG00000214193.11	ENST00000453908.8	2544	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	7.77059986244448	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGCCTGCGCGCGGCTA	36305689	True	NA	4	True	NA	NA	NA	36306367	36321347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_36306425_36306597_36306756_36306841_36306906_36307166_36307286_36307516_36307608_36307769_36307826_36307917_36307964_36308108_36308210_36308388_36308476_36309547_36309591_36319070_36319165_36319259_36319313_36319441_36319537_36319674_36320799_36320914_36320979_36321055
transcript_70041.known	chr16	-	940	6	FSM	ENSG00000007376.8	ENST00000565377.1	940	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	84.5680790842502	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCGGAGTGGACGCTGGA	-785323	True	NA	NA	False	NA	NA	NA	788381	785982	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_786378_786826_786929_787076_787180_787353_787478_787555_787646_788255
transcript_70042.known	chr16	-	835	6	FSM	ENSG00000007376.8	ENST00000567283.5	835	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	97.0760526597574	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCAGCTCGTGCAGGCCT	-785275	True	NA	NA	False	NA	NA	NA	788333	786148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_786378_786826_786929_787076_787180_787343_787478_787555_787745_788255
transcript_70050.known	chr16	-	1835	5	FSM	ENSG00000007376.8	ENST00000567114.5	1835	5	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	88.5476566601285	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGGACTCCAAATAAATGT	-785339	True	NA	-48	True	NA	NA	NA	788397	785013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_786378_786826_786929_787076_787180_787353_787478_788255
transcript_70052.known	chr16	-	1918	5	FSM	ENSG00000007376.8	ENST00000565809.5	1918	5	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_2	102.822662871567	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACTGGCTCCAAGGATGA	-785313	True	NA	-25	True	AATAAA	-7	NA	788371	784990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_786378_786826_786929_787353_787478_787555_787745_788255
transcript_70054.known	chr16	-	587	5	FSM	ENSG00000007376.8	ENST00000563560.1	587	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	107.961509344766	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCCGCTCACGGGTGTGT	-785271	True	NA	NA	False	NA	NA	NA	788329	786840	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_786929_787067_787180_787353_787478_787555_787745_788255
transcript_70060.known	chr16	-	2606	11	FSM	ENSG00000103227.19	ENST00000262301.16	2606	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	16.1418710191849	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACTGTTTAAATGAAGAA	-970480	True	NA	-3	True	NA	NA	NA	970984	853633	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_854707_868943_869057_869882_870067_870728_870883_871160_871342_879569_879738_893006_893073_910930_911080_934243_934255_954356_954667_970787
transcript_70068.known	chr16	-	1603	10	FSM	ENSG00000103227.19	ENST00000568897.5	1603	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	16.3095064303001	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGACCCAGCCCCTCGGC	-970362	True	NA	-28	True	AATAAA	-3	NA	970866	854511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_854707_868943_869057_869882_870067_870728_870883_871160_871342_879569_879738_893006_893073_910930_911080_954352_954667_970787
transcript_7007.known	chr1	+	5952	13	FSM	ENSG00000214193.11	ENST00000505871.7	5952	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	8.36120339557783	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGCTGAACATGTACAG	36306409	True	NA	NA	False	NA	NA	NA	36307109	36324977	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_36307286_36307516_36307608_36307769_36307826_36307917_36307964_36308108_36308210_36308388_36308476_36309547_36309591_36319070_36319165_36319259_36319313_36319441_36319537_36319674_36320799_36320914_36320979_36321055
transcript_70075.known	chr16	-	1728	4	FSM	ENSG00000260807.7	ENST00000563863.5	1728	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	11.4309521329882	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTGCTGTCTCCCAAGT	-980930	False	NA	-3	True	AATGAA	-19	NA	981298	975763	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_977094_979024_979111_979600_979759_981144
transcript_70077.known	chr16	-	1658	3	FSM	ENSG00000260807.7	ENST00000655952.1	1658	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	7	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACACAGGGCCTGGGGGGC	-979864	False	NA	NA	False	GGGGCT	-17	NA	980232	976153	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_977094_979024_979111_979600
transcript_70078.known	chr16	-	1140	3	FSM	ENSG00000260807.7	ENST00000669274.1	1140	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	20.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACACAGGGCCTGGGGGGC	-979872	False	NA	NA	False	GGGGCT	-17	NA	980240	976153	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_977094_979024_979111_980126
transcript_70079.known	chr16	-	813	3	FSM	ENSG00000260807.7	ENST00000565069.5	813	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	16	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAGGACCTCCCAGAGAG	-980930	False	NA	NA	False	NA	NA	NA	981298	976520	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_977094_979024_979111_981144
transcript_70080.known	chr16	+	3087	3	FSM	ENSG00000005513.10	ENST00000293894.4	3087	3	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	15	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGGCTGCATTTTGTGTG	981500	True	NA	15	True	ATTAAA	-19	NA	981769	986979	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_982345_983727_983961_984700
transcript_70081.nnic	chr16	+	2703	2	FSM	ENSG00000162009.9	ENST00000689027.1	2689	2	-15	1	-15	-1	multi-exon	FALSE	canonical	3	3	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCTTTCCCCGAGCAAA	NA	False	NA	NA	False	AATAAA	-17	NA	1072731	1081453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1072823_1078841
transcript_70083.known	chr16	+	8069	34	FSM	ENSG00000196557.13	ENST00000358590.8	8069	34	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	16.1750638496972	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGATTCCTGCCATCAG	1152158	False	NA	NA	False	AATAAA	-23	NA	1153240	1221771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1153471_1153719_1154037_1194971_1195084_1195431_1195566_1195925_1196024_1198614_1198775_1200255_1200572_1200715_1200809_1201662_1202453_1204009_1204459_1205113_1205266_1206103_1206290_1207000_1207119_1207274_1207431_1207769_1207861_1208012_1208222_1209031_1209413_1210034_1210136_1210369_1210494_1210582_1210652_1210786_1210972_1211167_1211295_1211480_1211607_1211715_1211806_1211945_1212139_1213779_1213932_1214971_1215082_1215241_1215376_1215522_1215594_1216931_1217011_1217918_1218041_1218209_1218652_1218969_1219131_1219980
transcript_70093.known	chr16	+	3109	8	FSM	ENSG00000103275.21	ENST00000397515.6	3109	8	0	0	0	0	multi-exon	TRUE	canonical	3	72	junction_1	889.361890024849	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGGCCTGCCGGGTGTGTC	1272406	True	NA	15	True	ATTAAA	-15	NA	1309634	1327018	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1309774_1312346_1312604_1314019_1314097_1314292_1314377_1315653_1315727_1320173_1320284_1320437_1320518_1324729
transcript_70096.known	chr16	+	2832	7	FSM	ENSG00000103275.21	ENST00000325437.9	2832	7	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	749.829313910839	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGGCCTGCCGGGTGTGTC	1306613	True	NA	15	True	ATTAAA	-15	NA	1309152	1327018	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1309272_1314019_1314097_1314292_1314377_1315653_1315727_1320173_1320284_1320437_1320518_1324729
transcript_70098.known	chr16	+	3253	7	FSM	ENSG00000103275.21	ENST00000355803.8	3253	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	765.464437812467	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGGCCTGCCGGGTGTGTC	1308868	False	NA	15	True	ATTAAA	-15	NA	1308879	1327018	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1309420_1314019_1314097_1314292_1314377_1315653_1315727_1320173_1320284_1320437_1320518_1324729
transcript_70099.known	chr16	+	2850	7	FSM	ENSG00000103275.21	ENST00000397514.8	2850	7	0	0	0	0	multi-exon	FALSE	canonical	3	1635	junction_1	219.269240888913	1396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGGCCTGCCGGGTGTGT	1272407	True	NA	14	True	ATTAAA	-14	NA	1309635	1327017	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1309774_1314019_1314097_1314292_1314377_1315653_1315727_1320173_1320284_1320437_1320518_1324729
transcript_70110.known	chr16	+	1771	4	FSM	ENSG00000103275.21	ENST00000473256.6	1771	4	0	0	0	0	multi-exon	FALSE	canonical	3	1635	junction_1	122.532535361928	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	1272407	True	NA	NA	False	NA	NA	NA	1309635	1317125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1309774_1314019_1314097_1314292_1314377_1315653
transcript_70114.known	chr16	+	735	3	FSM	ENSG00000103275.21	ENST00000562482.1	735	3	0	0	0	0	multi-exon	FALSE	canonical	3	1635	junction_1	149	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAAGTGCTTGGCCAGGG	1272529	False	NA	NA	False	NA	NA	NA	1309757	1314934	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1309774_1314019_1314097_1314292
transcript_70116.known	chr16	+	4531	34	FSM	ENSG00000007516.14	ENST00000426824.8	4531	34	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	6.6217495101249	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTCTGCCGTTTCTTGA	1332986	True	NA	9	True	AATATA	-18	NA	1333644	1349439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1333750_1338539_1338681_1338901_1338990_1339163_1339245_1339495_1339604_1340921_1340982_1341128_1341196_1341293_1341490_1341821_1341867_1341985_1342064_1342180_1342284_1342526_1342635_1342718_1342815_1342912_1343017_1343392_1343514_1344021_1344147_1344226_1344318_1344468_1344526_1344600_1344699_1344797_1344850_1344968_1345100_1345248_1345373_1345746_1345891_1345985_1346079_1346169_1346362_1346441_1346511_1346604_1346685_1346846_1346956_1347297_1347370_1347544_1347626_1347700_1347822_1347893_1348018_1348095_1348302_1348378
transcript_70117.known	chr16	+	3663	34	FSM	ENSG00000007516.14	ENST00000562208.5	3663	34	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_4	7.33996694707856	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTGTCTGTCTGGTGTGTG	1332986	True	NA	NA	False	NA	NA	NA	1333644	1348640	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1333750_1338539_1338681_1338901_1338990_1339163_1339245_1339564_1339604_1340921_1340982_1341128_1341196_1341293_1341490_1341821_1341867_1341985_1342064_1342180_1342284_1342526_1342635_1342718_1342815_1342912_1343017_1343392_1343514_1344021_1344147_1344226_1344318_1344468_1344526_1344600_1344699_1344797_1344850_1344968_1345100_1345248_1345373_1345746_1345891_1345985_1346079_1346169_1346362_1346441_1346511_1346604_1346685_1346846_1346956_1347297_1347370_1347544_1347626_1347700_1347822_1347893_1348018_1348095_1348302_1348378
transcript_70124.known	chr16	-	1210	6	FSM	ENSG00000007520.4	ENST00000007390.3	1210	6	0	0	0	0	multi-exon	FALSE	canonical	3	509	junction_5	52.2899607955485	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTTGTGAGTCTGTTTT	-1347259	True	NA	-10	True	AATGAA	-16	NA	1351878	1349239	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1349609_1349888_1349953_1350057_1350235_1350806_1351001_1351378_1351599_1351692
transcript_70128.nic	chr16	-	1201	5	NIC	ENSG00000007520.4	novel	1210	6	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	2	24	junction_1	244.487601935149	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTTGTGAGTCTGTTTT	NA	False	NA	-10	True	AATGAA	-16	NA	1351933	1349239	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_1349609_1350057_1350235_1350806_1351001_1351378_1351599_1351692
transcript_70134.known	chr16	-	2484	15	FSM	ENSG00000059145.19	ENST00000508903.7	2484	15	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_6	26.2499757045563	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTTTTTTTTTAATAT	-1412488	False	2203	-6	True	TATAAA	-15	NA	1414691	1365807	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1366396_1367241_1367350_1367655_1367859_1370129_1370358_1371518_1371612_1385207_1385386_1390631_1390695_1392890_1392977_1394130_1394216_1397177_1397296_1399373_1399510_1401567_1401702_1403167_1403345_1413845_1414056_1414614
transcript_70135.known	chr16	-	5250	15	FSM	ENSG00000059145.19	ENST00000389221.9	5250	15	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_6	27.1101306465585	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCTGCTTCTCTGAG	-1412501	False	2203	-12	True	ATTAAA	-14	NA	1414704	1363204	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1366396_1367091_1367350_1367655_1367859_1370129_1370358_1371518_1371612_1385207_1385386_1390631_1390695_1392890_1392977_1394130_1394216_1397177_1397296_1399373_1399510_1401567_1401702_1403167_1403345_1413845_1414056_1414614
transcript_70141.known	chr16	+	1975	11	FSM	ENSG00000090581.11	ENST00000204679.9	1975	11	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_5	11.7966096824469	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGACAGTAGCACAAAATATA	1347970	True	NA	NA	False	AATAAA	-20	NA	1351930	1364113	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1352018_1352101_1352160_1352238_1352307_1361742_1361798_1361871_1361956_1362037_1362132_1362205_1362321_1362451_1362535_1362610_1362743_1362824_1362907_1362996
transcript_70147.known	chr16	+	2185	10	FSM	ENSG00000090581.11	ENST00000683366.1	2185	10	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	104.269711994933	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCTATTAAAAGTCTTTG	1347979	True	NA	NA	False	GATAAA	-31	NA	1351939	1364387	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1352018_1352101_1352160_1352238_1352307_1361871_1361956_1362037_1362132_1362205_1362321_1362451_1362535_1362610_1362743_1362824_1362907_1362996
transcript_70150.known	chr16	+	2313	10	FSM	ENSG00000090581.11	ENST00000527168.6	2313	10	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_4	12.2030152112875	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCTATTAAAAGTCTTTG	1347985	True	NA	NA	False	GATAAA	-31	NA	1351945	1364387	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1352018_1352101_1352307_1361742_1361798_1361871_1361956_1362037_1362132_1362205_1362321_1362451_1362535_1362610_1362743_1362824_1362907_1362996
transcript_70186.nic	chr16	-	4152	6	NIC	ENSG00000059145.19	novel	4281	6	NA	NA	-29	0	intron_retention	FALSE	canonical	3	40	junction_5	18.0665436650179	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTCTGCTTCTCTGA	-1378384	True	NA	-13	True	ATTAAA	-13	NA	1379712	1363205	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_1366396_1367091_1367350_1367655_1367859_1370129_1370358_1371518_1371612_1379532
transcript_70189.known	chr16	-	2180	6	FSM	ENSG00000059145.19	ENST00000397464.5	2180	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	22.9817318755572	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCTGTTTTCTGATTAC	-1378355	True	NA	NA	False	NA	NA	NA	1379683	1364998	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1366396_1367241_1367350_1367655_1367859_1370129_1370358_1371518_1371612_1379532
transcript_7019.known	chr1	-	980	3	FSM	ENSG00000142694.7	ENST00000490466.2	980	3	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_2	3	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTCTCTCCCTCTGTTA	-36321495	True	NA	-1	True	AAGAAA	-17	NA	36323645	36322029	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_36322726_36322970_36323068_36323458
transcript_70194.nnic	chr16	-	2317	6	NNC	ENSG00000059145.19	novel	2184	6	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	30.6985341669598	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTTTCTGATTACTCAG	-1378384	True	NA	NA	False	NA	NA	NA	1379712	1364994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_1366396_1367091_1367350_1367655_1367813_1370129_1370358_1371518_1371612_1379532
transcript_70197.nic	chr16	-	2363	6	NIC	ENSG00000059145.19	novel	2184	6	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_5	18.0665436650179	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTTTCTGATTACTCAG	-1378384	True	NA	NA	False	NA	NA	NA	1379712	1364994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_1366396_1367091_1367350_1367655_1367859_1370129_1370358_1371518_1371612_1379532
transcript_70198.nic	chr16	-	2302	6	NIC	ENSG00000059145.19	novel	2184	6	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_5	28.9786128032382	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTTTCTGATTACTCAG	-1378384	True	NA	NA	False	NA	NA	NA	1379712	1364994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_1366396_1367091_1367350_1367655_1367859_1370129_1370358_1371518_1371612_1379593
transcript_7020.nnic	chr1	+	1852	2	NIC	ENSG00000214193.11	novel	2387	6	NA	NA	822	-3	combination_of_known_splicesites	FALSE	canonical	3	20	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTGTTTGTGAAGTGCC	36321400	True	NA	9	True	AATAAA	-10	NA	36321425	36329218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_36321779_36327719
transcript_70203.nic	chr16	-	2152	6	NIC	ENSG00000059145.19	novel	2184	6	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_5	31.2576390663147	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTTTCTGATTACTCAG	-1378384	True	NA	NA	False	NA	NA	NA	1379712	1364994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_1366396_1367241_1367350_1367655_1367859_1370129_1370358_1371518_1371612_1379593
transcript_70207.nic	chr16	-	2197	6	NIC	ENSG00000059145.19	novel	4320	6	NA	NA	-29	-162	combination_of_known_junctions	FALSE	canonical	3	40	junction_5	18.0665436650179	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCCTGGCGTGAGAGCGG	-1378384	True	NA	NA	False	AGTAAA	-11	NA	1379712	1365160	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_1366396_1367091_1367350_1367655_1367859_1370129_1370358_1371518_1371612_1379532
transcript_70212.known	chr16	-	1431	6	FSM	ENSG00000059145.19	ENST00000301712.5	1431	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	8.01498596380555	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAGAGTAGAGGATTTTGT	-1412548	False	2203	NA	False	AATAAA	-17	NA	1414751	1398304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1398942_1399373_1399510_1401567_1401702_1403167_1403345_1413845_1414056_1414614
transcript_70218.known	chr16	-	669	5	FSM	ENSG00000059145.19	ENST00000402641.6	669	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	32.3612422505688	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCGACCGGCAGCTGGCG	-1378352	True	NA	NA	False	NA	NA	NA	1379680	1367291	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1367350_1367655_1367859_1370129_1370358_1371518_1371612_1379593
transcript_70220.known	chr16	+	386	3	FSM	ENSG00000090581.11	ENST00000527137.2	386	3	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_1	12	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTCCTTTCCTTTCCGA	1347990	True	NA	NA	False	ATTAAA	-16	NA	1351950	1352499	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1352018_1352101_1352160_1352238
transcript_70223.known	chr16	+	1237	11	FSM	ENSG00000090581.11	ENST00000683887.1	1237	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	108.492211702039	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCTGGGTTAAGAAAATT	1347994	True	NA	4	True	AGTAAA	-16	NA	1351954	1363351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1352018_1352101_1352160_1352238_1352307_1361694_1361798_1361871_1361956_1362037_1362132_1362205_1362321_1362451_1362535_1362610_1362743_1362824_1362907_1362996
transcript_70224.known	chr16	-	917	2	FSM	ENSG00000174109.5	ENST00000442039.3	917	2	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	0	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGATGATTCCCTTTTTTT	-1418544	True	NA	-7	True	AATAAA	-22	NA	1420747	1419751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1420613_1420691
transcript_70225.known	chr16	-	1005	1	FSM	ENSG00000174109.5	ENST00000563974.1	1005	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGATGATTCCCTTTTTTT	-1418553	True	NA	-7	True	AATAAA	-22	NA	1420756	1419751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1419800_1420800
transcript_70230.nnic	chr16	-	3819	25	NIC	ENSG00000103249.18	novel	4168	25	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	58.214402570727	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCGCCTTTGCCAGCGTC	-1470238	True	NA	-8	True	AATAAA	-12	NA	1475084	1445343	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_1446718_1447005_1447087_1447387_1447569_1447654_1447715_1448354_1448485_1448680_1448767_1448965_1449094_1449275_1449328_1450496_1450667_1451622_1451717_1452754_1452894_1453833_1453895_1454410_1454466_1455133_1455251_1455730_1455796_1456112_1456207_1457253_1457338_1457693_1457757_1459106_1459188_1460417_1460528_1460815_1460949_1461404_1461471_1461602_1461675_1465266_1465339_1474833
transcript_70234.known	chr16	-	3717	24	FSM	ENSG00000103249.18	ENST00000262318.12	3717	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	77.0753197523944	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCGCCTTTGCCAGCGTC	-1470211	True	NA	-8	True	AATAAA	-12	NA	1475057	1445343	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1446718_1447005_1447084_1447387_1447569_1447654_1447715_1448354_1448485_1448680_1448767_1448965_1449094_1449275_1449328_1450496_1450667_1451622_1451717_1452754_1452894_1453833_1453895_1454410_1454466_1455133_1455251_1455730_1455796_1456112_1456207_1457253_1457338_1457693_1457757_1459106_1459188_1460417_1460528_1460815_1460949_1461404_1461471_1461602_1461675_1474833
transcript_7026.known	chr1	-	3846	12	FSM	ENSG00000196182.11	ENST00000373129.7	3846	12	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_10	44.8129261163276	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGCCTGCGTCTCCTGCC	-36384155	True	NA	-4	True	AATAAA	-21	NA	36385884	36339623	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_36341974_36343363_36343449_36343859_36343980_36344119_36344265_36348699_36348816_36354363_36354417_36355205_36355434_36358238_36358383_36358736_36358823_36361220_36361341_36367847_36368085_36385722
transcript_70273.known	chr16	-	4168	25	FSM	ENSG00000103249.18	ENST00000382745.9	4168	25	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_19	25.9405035074923	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCGCTGCTTCTTGCCTTT	-1470182	True	NA	-1	True	AATAAA	-19	NA	1475028	1444934	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1446718_1447005_1447087_1447391_1447569_1447654_1447715_1448354_1448485_1448680_1448767_1448965_1449094_1449275_1449328_1450496_1450667_1451622_1451717_1452754_1452894_1453833_1453895_1454410_1454466_1455133_1455251_1455730_1455796_1456112_1456207_1457253_1457338_1457693_1457757_1459106_1459188_1460417_1460528_1460815_1460949_1461404_1461471_1461602_1461675_1465266_1465339_1474833
transcript_70274.known	chr16	-	5232	31	FSM	ENSG00000187535.14	ENST00000426508.7	5232	31	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_30	23.5711688297377	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGTGCCCTGTCCCATCC	-1611051	True	NA	-1	True	AATAAA	-19	NA	1612072	1510426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1511151_1518215_1518358_1519880_1520048_1520130_1520344_1520601_1520809_1523517_1523701_1523827_1523957_1524551_1524696_1524783_1524917_1525230_1525327_1525886_1526078_1526618_1526797_1557934_1558135_1561984_1562117_1563996_1564163_1566160_1566292_1568216_1568335_1571406_1571535_1580758_1580851_1583313_1583387_1584216_1584421_1586129_1586276_1587197_1587305_1587932_1588025_1589604_1589781_1592175_1592319_1592466_1592589_1602369_1602592_1607119_1607298_1610663_1610854_1611967
transcript_7028.known	chr1	-	3645	11	FSM	ENSG00000196182.11	ENST00000373132.4	3645	11	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	20.8614476966485	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGTGGCCTGCGTCTCC	-36384195	True	NA	-8	True	AATAAA	-17	NA	36385924	36339627	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_36341974_36343363_36343449_36343859_36343980_36344119_36344265_36348699_36348816_36354363_36354417_36355205_36355434_36358238_36358383_36358736_36358823_36361220_36361341_36385722
transcript_70292.nic	chr16	+	3358	21	NIC	ENSG00000100726.15	novel	3314	21	NA	NA	-63	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_7	90.5880096922324	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGGAGTGTTGGTGGCC	NA	False	NA	NA	False	AATAAA	-15	NA	1493280	1510454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_1493606_1494280_1494617_1495345_1495624_1497035_1497105_1497360_1497509_1499230_1499334_1500095_1500165_1500346_1500489_1500562_1500700_1501419_1501500_1501662_1501774_1502046_1502136_1502312_1502405_1502644_1502762_1502930_1503003_1505409_1505602_1506237_1506330_1506951_1507052_1507305_1507371_1507600_1507717_1509829
transcript_70299.known	chr16	+	3314	21	FSM	ENSG00000100726.15	ENST00000262319.11	3314	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	77.2369082757719	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGGAGTGTTGGTGGCC	1490979	True	NA	NA	False	AATAAA	-15	NA	1493359	1510454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1493606_1494245_1494617_1495345_1495624_1497035_1497105_1497360_1497509_1499230_1499334_1500095_1500165_1500346_1500489_1500562_1500700_1501419_1501500_1501662_1501774_1502046_1502136_1502312_1502405_1502644_1502762_1502930_1503003_1505409_1505602_1506237_1506330_1506951_1507052_1507305_1507371_1507600_1507717_1509829
transcript_70305.nnic	chr16	+	3633	21	NNC	ENSG00000100726.15	novel	3314	21	NA	NA	128	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	98.6846492621826	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGGAGTGTTGGTGGCC	1493260	False	NA	NA	False	AATAAA	-15	NA	1493487	1510454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_1494053_1494245_1494617_1495345_1495624_1497035_1497105_1497360_1497509_1499230_1499334_1500095_1500165_1500346_1500489_1500562_1500700_1501419_1501500_1501662_1501774_1502046_1502136_1502312_1502405_1502644_1502762_1502930_1503003_1505409_1505602_1506237_1506330_1506951_1507052_1507305_1507371_1507600_1507717_1509829
transcript_7034.nic	chr1	-	2026	7	ISM	ENSG00000196182.11	ENST00000373132.4	3645	11	-23	8018	-23	7559	5prime_fragment	FALSE	canonical	3	99	junction_5	21.6307394438768	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATAAAGTTACTGCCCAC	-36385915	False	NA	NA	False	AAAAAG	-12	NA	36385947	36347645	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_36348816_36354363_36354417_36355205_36355434_36358238_36358383_36358736_36358823_36361220_36361341_36385722
transcript_70354.known	chr16	+	593	6	FSM	ENSG00000206053.13	ENST00000566742.5	593	6	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_5	418.873441507098	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCACACCTGTCCAATT	1655009	True	NA	NA	False	NA	NA	NA	1678289	1700225	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1678357_1685438_1685588_1691842_1691986_1697811_1697861_1698810_1698844_1700073
transcript_70357.known	chr16	+	3185	6	FSM	ENSG00000206053.13	ENST00000562684.5	3185	6	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_1	486.775759462198	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGCCTTGTTTTGTTTTG	1654996	True	NA	85	True	NA	NA	NA	1678276	1701490	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1678357_1683508_1683593_1685438_1685588_1691842_1691986_1697811_1697861_1698810
transcript_70359.known	chr16	+	3695	5	FSM	ENSG00000206053.13	ENST00000248098.8	3695	5	0	0	0	0	multi-exon	FALSE	canonical	3	1014	junction_4	39.2460189063808	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTAGCTATTTTCATAT	1654998	True	NA	24	True	AATAAA	-32	NA	1678278	1702086	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1678357_1685438_1685588_1691842_1691986_1697811_1697861_1698810
transcript_70367.known	chr16	+	1065	4	FSM	ENSG00000206053.13	ENST00000561516.5	1065	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	477.883528348348	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTGCCCTGACCCTCT	1654998	True	NA	44	True	NA	NA	NA	1678278	1699599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1678357_1685438_1685588_1697811_1697861_1698810
transcript_70369.known	chr16	+	911	4	FSM	ENSG00000206053.13	ENST00000569256.5	911	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	459.290273743692	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCGCTTCCATTCTGGAGA	1654975	True	NA	NA	False	NA	NA	NA	1678255	1699428	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1678357_1691842_1691986_1697811_1697861_1698810
transcript_7037.known	chr1	-	1006	4	FSM	ENSG00000181817.6	ENST00000476041.1	1006	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	236.17507630287	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGCTAGTGTGGGTTGCT	-36393144	True	NA	NA	False	NA	NA	NA	36397887	36391237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_36391605_36392357_36392488_36393765_36394154_36397766
transcript_70381.known	chr16	+	5686	32	FSM	ENSG00000138834.15	ENST00000610761.2	5686	32	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	38.9480830565166	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGAGGACTTTATTATAAAAA	1703898	True	NA	49	True	NA	NA	NA	1706194	1770351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1706658_1724556_1724678_1729137_1729209_1729486_1729579_1743331_1743477_1747028_1747276_1748243_1748347_1748601_1748721_1758147_1758160_1758977_1758996_1759957_1760016_1760379_1760533_1761223_1761306_1762350_1762482_1762674_1762732_1762835_1763007_1763656_1763784_1764114_1764211_1764300_1764460_1765012_1765179_1765959_1766143_1766219_1766410_1766528_1766649_1766722_1766804_1766903_1766972_1767148_1767298_1767563_1767736_1767804_1767919_1768068_1768108_1768198_1768379_1768476_1768627_1768702
transcript_70384.known	chr16	+	5661	32	FSM	ENSG00000138834.15	ENST00000250894.8	5661	32	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	38.0254309996023	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTTCCTGGGCCCA	1703886	True	NA	15	True	AATAAA	-16	NA	1706182	1770317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1706658_1724556_1724678_1729137_1729209_1729486_1729579_1743334_1743477_1747028_1747276_1748243_1748347_1748601_1748721_1758147_1758160_1758977_1758996_1759957_1760016_1760379_1760533_1761223_1761306_1762350_1762482_1762674_1762732_1762835_1763007_1763656_1763784_1764114_1764211_1764300_1764460_1765012_1765179_1765959_1766143_1766219_1766410_1766528_1766649_1766722_1766804_1766903_1766972_1767148_1767298_1767563_1767736_1767804_1767919_1768068_1768108_1768198_1768379_1768476_1768627_1768702
transcript_70388.nic	chr16	+	3720	15	ISM	ENSG00000138834.15	ENST00000250894.8	5661	32	57694	0	-45	0	3prime_fragment	FALSE	canonical	3	98	junction_4	13.8698395441184	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTTCCTGGGCCCA	NA	False	NA	15	True	AATAAA	-16	NA	1763876	1770317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_1764211_1764300_1764460_1765012_1765179_1765959_1766143_1766219_1766410_1766528_1766649_1766722_1766804_1766903_1766972_1767148_1767298_1767563_1767736_1767804_1767919_1768068_1768108_1768198_1768379_1768476_1768627_1768702
transcript_70399.nic	chr16	+	1271	4	ISM	ENSG00000138834.15	ENST00000564098.5	4436	5	-75	16996	0	495	5prime_fragment	FALSE	canonical	3	75	junction_2	5.55777733351102	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTTTAAAAATTAGCTAAG	1703869	True	NA	NA	False	NA	NA	NA	1706165	1730073	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_1706658_1724556_1724678_1729137_1729209_1729486
transcript_7040.known	chr1	-	860	2	FSM	ENSG00000181817.6	ENST00000315732.3	860	2	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_1	0	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCTCTAAGTGTCTCCA	-36393165	True	NA	-26	True	ATTAAA	-15	NA	36397908	36393435	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_36394154_36397766
transcript_70400.known	chr16	-	920	4	FSM	ENSG00000103024.8	ENST00000563498.1	920	4	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_3	49.1279508585037	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGATTTGGGCCCAGGAACA	-1771482	False	39727	-30	True	AATAAA	-16	NA	1771561	1770343	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1770767_1770880_1770994_1771069_1771172_1771279
transcript_70405.known	chr16	-	1014	3	FSM	ENSG00000103024.8	ENST00000561637.5	1014	3	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_2	37.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCAGGAACAGGCAGCTAC	-1771459	False	39727	-21	True	AATAAA	-25	NA	1771538	1770334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1770767_1770880_1770994_1771069
transcript_70406.known	chr16	-	913	4	FSM	ENSG00000103024.8	ENST00000566600.1	913	4	0	0	0	0	multi-exon	TRUE	canonical	3	395	junction_3	52.5124323903926	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTTTTTTTATAATAAAGT	-1771478	False	39727	-63	True	NA	NA	NA	1771557	1770376	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1770767_1770880_1770994_1771069_1771411_1771488
transcript_70407.known	chr16	+	1349	7	FSM	ENSG00000095906.17	ENST00000262302.14	1349	7	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_3	113.598342124053	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATGTTTCTAGAGTCTT	1771801	True	NA	16	True	ATTAAA	-25	NA	1782959	1789186	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1783037_1786536_1786656_1786756_1786956_1787676_1787832_1787940_1788052_1788137_1788208_1788568
transcript_70413.known	chr16	-	1535	7	FSM	ENSG00000162032.16	ENST00000566339.6	1535	7	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_6	74.2914680311422	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGCGTGAGCTGAAACGT	-1779501	True	NA	-2	True	AATAAA	-25	NA	1782571	1776711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1777444_1777746_1777873_1777945_1778049_1778133_1778322_1778434_1778613_1781357_1781496_1782501
transcript_70415.known	chr16	+	1173	6	FSM	ENSG00000095906.17	ENST00000568834.5	1173	6	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_2	207.513854959133	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGATCTGATGTTTCTAGA	1771773	True	NA	11	True	ATTAAA	-20	NA	1782931	1789181	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1783037_1786536_1786656_1787676_1787832_1787940_1788052_1788137_1788208_1788568
transcript_70417.known	chr16	-	2316	6	FSM	ENSG00000162032.16	ENST00000564709.5	2316	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	142.032953922672	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATGGCGTGAGCTGAAAC	-1779435	True	NA	-4	True	AATAAA	-23	NA	1782505	1776713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1777444_1777746_1777873_1777945_1778049_1778133_1778613_1781357_1781496_1781765
transcript_70419.known	chr16	-	1628	6	FSM	ENSG00000162032.16	ENST00000567868.5	1628	6	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_5	71.2336998898695	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCACATGGCGTGAGCTG	-1779487	True	NA	-8	True	AATAAA	-19	NA	1782557	1776717	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1777444_1777746_1777873_1777945_1778049_1778133_1778613_1781357_1781496_1782501
transcript_7042.known	chr1	-	1455	10	FSM	ENSG00000116885.18	ENST00000235532.9	1455	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	3.44623609317129	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCCCATTTTATTCTTA	-36450292	True	NA	1	True	AATATA	-20	NA	36450451	36417905	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_36418256_36418990_36419055_36420475_36420616_36422149_36422220_36422767_36422897_36423362_36423467_36431801_36431883_36432421_36432590_36438755_36438911_36450257
transcript_70427.known	chr16	-	1746	5	FSM	ENSG00000162032.16	ENST00000563741.5	1746	5	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_4	77.9274502341761	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAACACCCACATGGCGTGA	-1779524	True	NA	-12	True	AATAAA	-15	NA	1782594	1776721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1777444_1777746_1777873_1777945_1778613_1781357_1781496_1782501
transcript_70435.known	chr16	-	1781	4	FSM	ENSG00000162032.16	ENST00000569380.5	1781	4	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_3	89.9382504215469	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCACATGGCGTGAGCTG	-1779482	True	NA	-8	True	AATAAA	-19	NA	1782552	1776717	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1777444_1777746_1778613_1781357_1781496_1782501
transcript_70438.known	chr16	-	1040	3	FSM	ENSG00000074071.15	ENST00000177742.7	1040	3	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_1	1257	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCGTGGTGTCTTTGCGCT	-1733423	True	NA	-4	True	AATAAA	-19	NA	1773150	1771889	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1772535_1772603_1772647_1772798
transcript_7044.known	chr1	-	989	9	FSM	ENSG00000116885.18	ENST00000445843.7	989	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	4.60807714779169	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTGCTAGTTTTCTAC	-36450239	False	NA	NA	False	NA	NA	NA	36450279	36418059	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_36418256_36418990_36419055_36422149_36422220_36422767_36422897_36423362_36423467_36431801_36431883_36432421_36432590_36438755_36438911_36450257
transcript_70440.known	chr16	-	998	3	FSM	ENSG00000074071.15	ENST00000397375.7	998	3	0	0	0	0	multi-exon	FALSE	canonical	3	2790	junction_2	74	1648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGGGTCGTGGTGTCTTT	-1733407	True	NA	-9	True	AATAAA	-14	NA	1773134	1771894	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1772514_1772603_1772647_1772798
transcript_70447.nic	chr16	-	1454	2	NIC	ENSG00000074071.15	novel	1040	3	NA	NA	-356	-5	intron_retention	FALSE	canonical	3	2790	junction_1	0	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTACCCAGGGTCGTGGT	-1773485	False	3070	-15	True	AATAAA	-8	NA	1773506	1771900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_1772647_1772798
transcript_70448.known	chr16	-	713	2	FSM	ENSG00000074071.15	ENST00000569585.1	713	2	0	0	0	0	multi-exon	FALSE	canonical	3	2938	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGGGTCGTGGTGTCTT	-1769628	False	NA	-10	True	AATAAA	-13	NA	1772698	1771895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1772514_1772603
transcript_70449.known	chr16	-	1867	14	FSM	ENSG00000162039.17	ENST00000325962.9	1867	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_11	11.5717468622411	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATTTGAATGATTTATTT	-1872062	True	NA	-3	True	AATAAA	-17	NA	1872164	1833985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1834367_1837783_1837871_1839254_1839439_1841819_1841974_1844861_1844964_1853038_1853135_1853218_1853272_1854099_1854201_1857734_1857931_1860402_1860476_1861984_1862117_1865777_1865836_1868106_1868185_1871992
transcript_7045.known	chr1	-	767	5	FSM	ENSG00000116885.18	ENST00000354267.3	767	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	4.43705983732471	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATGTATTTAGTGCCTT	-36450284	True	NA	NA	False	AATAAA	-21	NA	36450443	36428298	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_36428476_36431801_36431883_36432421_36432590_36438755_36438911_36450257
transcript_70454.known	chr16	-	1257	10	FSM	ENSG00000063854.13	ENST00000397353.6	1257	10	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_9	77.2395663975656	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCCTTGCAGACTGTTT	-1825101	True	NA	-5	True	NA	NA	NA	1826841	1809102	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1809383_1809753_1809834_1816892_1816995_1817167_1817272_1819114_1819224_1819896_1820015_1822299_1822365_1822864_1823038_1826506_1826603_1826711
transcript_70456.known	chr16	-	2619	9	FSM	ENSG00000063854.13	ENST00000397356.8	2619	9	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_8	30.0891903347365	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTGCTCATTTGTCAAC	-1825085	True	NA	NA	False	NA	NA	NA	1826825	1807628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1809383_1809753_1809834_1816892_1816995_1817167_1817272_1819114_1819224_1819896_1820015_1822299_1822365_1822864_1823038_1826711
transcript_70459.known	chr16	-	1276	8	FSM	ENSG00000063854.13	ENST00000455446.6	1276	8	0	0	0	0	multi-exon	FALSE	canonical	2	36	junction_4	68.1924048676438	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGAGGTGGCCGCGTCTTC	-1825094	True	NA	NA	False	NA	NA	NA	1826834	1808871	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1809383_1809753_1809834_1816892_1816995_1817167_1817272_1819896_1820015_1822299_1822365_1822864_1823038_1826711
transcript_70461.known	chr16	-	1147	3	FSM	ENSG00000063854.13	ENST00000565097.1	1147	3	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_2	38.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGCTCTTCAAAGCTAGA	-1825092	True	NA	NA	False	NA	NA	NA	1826832	1821511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1822365_1822864_1823038_1826711
transcript_70462.known	chr16	+	1974	1	FSM	ENSG00000180185.12	ENST00000427358.4	1974	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACAAGGGTAATTTTTTT	1826715	True	NA	11	True	AATAAA	-20	NA	1826940	1828914	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1826900_1828900
transcript_70463.known	chr16	-	1363	5	NNC	ENSG00000198736.13	novel	550	5	NA	NA	-94	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	145.07131866775	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTACTGTCTTTTTTTTTG	-1938262	True	NA	-10	True	AATGAA	-9	NA	1943293	1938233	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_1939144_1940777_1940812_1940814_1940893_1941256_1941406_1943101
transcript_70464.known	chr16	-	550	5	FSM	ENSG00000198736.13	ENST00000564908.1	550	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	159.204860164506	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCCAGACGGCCACCACAC	-1938168	True	NA	NA	False	AAGAAA	-41	NA	1943199	1939094	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1939144_1940777_1940893_1941028_1941168_1941256_1941406_1943101
transcript_70465.known	chr16	-	1277	4	FSM	ENSG00000198736.13	ENST00000361871.8	1277	4	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_3	21.202725191719	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTTTTTTTTTGTTTTG	-1938168	True	NA	-5	True	AATGAA	-14	NA	1943199	1938228	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1939144_1940777_1940893_1941256_1941406_1943101
transcript_70466.known	chr16	-	847	3	FSM	ENSG00000198736.13	ENST00000399753.2	847	3	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_2	17	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGCAGGGCGCAGTGGTT	-1938164	True	NA	-88	True	NA	NA	NA	1943195	1939018	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1939144_1940777_1941406_1943101
transcript_70468.known	chr16	+	628	4	FSM	ENSG00000140990.15	ENST00000569148.1	628	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	1138.434402541	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTCTGGTGTGATC	1920785	True	NA	25	True	TATAAA	-14	NA	1959551	1961975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1959755_1961152_1961259_1961496_1961637_1961796
transcript_70469.known	chr16	+	495	4	FSM	ENSG00000140990.15	ENST00000570172.1	495	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	1245.5982052367	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGAGGCAGAGGATGCT	1920791	True	NA	NA	False	NA	NA	NA	1959557	1961840	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1959755_1961152_1961292_1961496_1961612_1961796
transcript_7047.known	chr1	-	953	8	FSM	ENSG00000116898.12	ENST00000373116.6	953	8	0	0	0	0	multi-exon	FALSE	canonical	3	1635	junction_1	57.7057985273011	1154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAGAAGGAATTTATTCT	-36443054	True	NA	25	True	GGGGCT	-15	NA	36464384	36455717	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_36455926_36456186_36456379_36457922_36457982_36460691_36460777_36461263_36461313_36462087_36462164_36463805_36463851_36464145
transcript_70470.known	chr16	+	675	4	FSM	ENSG00000140990.15	ENST00000268668.11	675	4	0	0	0	0	multi-exon	FALSE	canonical	3	2271	junction_3	200.769076857524	1568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTCTGGTGTGATC	1920771	True	NA	25	True	TATAAA	-14	NA	1959537	1961975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1959755_1961152_1961292_1961496_1961637_1961796
transcript_70473.known	chr16	+	830	3	FSM	ENSG00000140990.15	ENST00000543683.6	830	3	0	0	0	0	multi-exon	FALSE	canonical	3	2629	junction_1	56.5	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTCTGGTGTGATC	1920776	True	NA	25	True	TATAAA	-14	NA	1959542	1961975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1959755_1961152_1961292_1961496
transcript_70476.known	chr16	+	958	2	FSM	ENSG00000140990.15	ENST00000565031.1	958	2	0	0	0	0	multi-exon	FALSE	canonical	3	2629	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGAGGCAGCTGTGGGT	1920777	True	NA	-51	True	NA	NA	NA	1959543	1961899	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1959755_1961152
transcript_70482.known	chr16	-	945	7	FSM	ENSG00000140988.16	ENST00000343262.9	945	7	0	0	0	0	multi-exon	FALSE	canonical	3	35178	junction_6	8060.65561160436	11933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTTTTCCCGTGTCCT	-1202565	True	NA	-24	True	AATAAA	-18	NA	1964826	1962057	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1962271_1962496_1962657_1962735_1962910_1963148_1963257_1964275_1964366_1964448_1964629_1964806
transcript_70503.known	chr16	-	170	3	FSM	ENSG00000140988.16	ENST00000563194.1	170	3	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_2	18966	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTTTTGAAGATTATGCC	-1964698	False	NA	NA	False	NA	NA	NA	1964841	1963211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1963257_1964275_1964366_1964806
transcript_70504.known	chr16	-	1186	5	FSM	ENSG00000140988.16	ENST00000533161.5	1186	5	0	0	0	0	multi-exon	FALSE	canonical	3	38190	junction_3	6771.59508535471	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGTTTTTTTCCCGTGT	-1964670	False	NA	-27	True	AATAAA	-15	NA	1964813	1962060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1962271_1962496_1962910_1963148_1963257_1964275_1964366_1964448
transcript_70505.known	chr16	-	1114	5	FSM	ENSG00000140988.16	ENST00000533872.5	1114	5	0	0	0	0	multi-exon	FALSE	canonical	3	38190	junction_3	6589.69802039517	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGTTTTTTTCCCGTGT	-1964438	False	NA	-27	True	AATAAA	-15	NA	1964581	1962060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1962271_1962496_1962657_1962735_1963257_1964275_1964366_1964448
transcript_70506.known	chr16	-	765	5	FSM	ENSG00000140988.16	ENST00000530225.5	765	5	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	21661.8581194573	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGTTTTTTTCCCGTGT	-1964488	False	NA	-27	True	AATAAA	-15	NA	1964631	1962060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1962271_1962735_1962910_1963148_1963257_1964275_1964366_1964448
transcript_70507.known	chr16	+	275	2	FSM	ENSG00000255198.5	ENST00000531523.2	335	2	60	0	60	0	multi-exon	FALSE	canonical	3	499	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATGCGGGTGTTCTTGGG	1964293	True	NA	15	True	AATAAA	-20	NA	1964958	1965509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1965130_1965405
transcript_70508.known	chr16	+	471	1	FSM	ENSG00000255198.5	ENST00000564014.1	471	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTGCATGCGGGTGTTC	1964368	True	NA	10	True	AATAAA	-15	NA	1965033	1965504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1965000_1965500
transcript_70521.known	chr16	+	6783	22	FSM	ENSG00000183751.16	ENST00000568546.6	6783	22	0	0	0	0	multi-exon	FALSE	canonical	3	496	junction_10	34.6318506488619	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATCCACTCCCCATATGA	1966835	True	NA	NA	False	NA	NA	NA	1972052	1982929	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1972206_1974055_1974108_1974196_1974293_1974375_1974424_1974537_1974680_1974762_1974848_1974927_1975099_1975186_1975263_1975344_1975439_1975528_1975711_1975807_1975950_1976055_1976115_1976210_1976315_1976813_1976962_1977053_1977285_1977355_1977427_1977513_1977671_1977741_1977801_1977957_1978062_1978148_1978221_1978312_1978472_1978551
transcript_70561.nic	chr16	-	1167	4	ISM	ENSG00000196408.12	ENST00000397280.8	1147	8	685	-123	685	0	intron_retention	FALSE	canonical	3	17	junction_2	6.53197264742181	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCACCGTCTAAGCGTGC	-1980486	False	NA	-12	True	AGTAAA	-16	NA	1980498	1978916	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_1979350_1979424_1979543_1979789_1979904_1979996
transcript_70563.known	chr16	+	2594	21	FSM	ENSG00000183751.16	ENST00000569628.5	2594	21	0	0	0	0	multi-exon	FALSE	canonical	3	496	junction_9	35.0341262200158	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGTCCGGCCTCTCTCCA	1966868	True	NA	15	True	CATAAA	-15	NA	1972085	1978684	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1972206_1974055_1974293_1974375_1974424_1974537_1974680_1974762_1974848_1974927_1975099_1975186_1975263_1975344_1975439_1975528_1975711_1975807_1975950_1976055_1976115_1976210_1976315_1976813_1976962_1977053_1977285_1977355_1977427_1977513_1977671_1977741_1977801_1977957_1978062_1978148_1978221_1978312_1978472_1978551
transcript_70567.known	chr16	+	2026	4	FSM	ENSG00000127561.16	ENST00000248121.7	2026	4	0	0	0	0	multi-exon	TRUE	canonical	3	126	junction_1	157.404644855932	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGACGCTCCTGGAATCA	1989387	True	NA	16	True	AATAAA	-24	NA	1989969	1994275	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1990202_1991973_1992212_1992635_1992779_1992862
transcript_70569.known	chr16	+	2365	3	FSM	ENSG00000127554.13	ENST00000248114.7	2365	3	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_1	17.5	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTTCTTTTTGTTGT	1977716	True	NA	30	True	AATAAA	-20	NA	1984192	1987749	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1984477_1984746_1984944_1985865
transcript_70574.known	chr16	+	482	2	FSM	ENSG00000127554.13	ENST00000561710.1	482	2	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGCGGGGAACGTAGAGA	1977781	True	NA	NA	False	GGGGCT	-13	NA	1984257	1985009	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_1984477_1984746
transcript_70582.known	chr16	-	3368	12	FSM	ENSG00000167962.15	ENST00000652647.1	3362	12	-7	1	0	0	multi-exon	FALSE	canonical	3	85	junction_4	32.6448456944312	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTGGTGTTCTGAGCTT	NA	False	NA	-8	True	AATAAA	-21	NA	2009821	1997654	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1998586_1998701_1998853_1998964_1999122_1999495_2000257_2000390_2000482_2001003_2001192_2001582_2001701_2002205_2002424_2002520_2002733_2002990_2003121_2003615_2003729_2009523
transcript_70583.nnic	chr16	-	3402	12	NNC	ENSG00000167962.15	novel	3362	12	NA	NA	-3	0	intron_retention	FALSE	canonical	3	21	junction_8	55.2335387391836	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGGTGTTCTGAGCTTC	NA	False	NA	-7	True	AATAAA	-22	NA	2009824	1997653	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_1998586_1998701_1998853_1998964_1999122_1999495_2000257_2000390_2000482_2001003_2001192_2001582_2001701_2002205_2002454_2002520_2002733_2002990_2003121_2003615_2003729_2009523
transcript_70584.nic	chr16	-	3354	12	NIC	ENSG00000167962.15	novel	3362	12	NA	NA	-3	0	intron_retention	FALSE	canonical	3	78	junction_4	34.4201075194848	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGGTGTTCTGAGCTTC	NA	False	NA	-7	True	AATAAA	-22	NA	2009824	1997653	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_1998586_1998701_1998853_1998964_1999122_1999495_2000257_2000408_2000482_2001003_2001192_2001582_2001701_2002205_2002424_2002520_2002733_2002990_2003121_2003615_2003729_2009523
transcript_70585.nnic	chr16	-	3384	12	NNC	ENSG00000167962.15	novel	3362	12	NA	NA	-3	0	intron_retention	FALSE	canonical	3	21	junction_8	56.1528315926078	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGGTGTTCTGAGCTTC	NA	False	NA	-7	True	AATAAA	-22	NA	2009824	1997653	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_1998586_1998701_1998853_1998964_1999122_1999495_2000257_2000408_2000482_2001003_2001192_2001582_2001701_2002205_2002454_2002520_2002733_2002990_2003121_2003615_2003729_2009523
transcript_70591.nic	chr16	-	3506	11	NIC	ENSG00000167962.15	novel	3362	12	NA	NA	-3	0	intron_retention	FALSE	canonical	3	165	junction_7	16.5541535573402	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGGTGTTCTGAGCTTC	NA	False	NA	-7	True	AATAAA	-22	NA	2009824	1997653	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_1998586_1998701_1998853_1998964_1999122_1999495_2000482_2001003_2001192_2001582_2001701_2002205_2002424_2002520_2002733_2002990_2003121_2003615_2003729_2009523
transcript_70614.known	chr16	-	3382	11	FSM	ENSG00000167962.15	ENST00000562988.5	3382	11	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_6	54.4136012408662	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGGTGTTCTGAGCTTC	-2007828	True	NA	-7	True	AATAAA	-22	NA	2009764	1997653	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_1998586_1998701_1998853_1998964_1999122_1999495_2000257_2000408_2000482_2001003_2001192_2001591_2001701_2002205_2002733_2002990_2003121_2003615_2003729_2009523
transcript_70615.known	chr16	+	751	2	FSM	ENSG00000183971.10	ENST00000566435.4	751	2	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_1	0	294	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTCGTCTGCTTGTGTA	2017092	True	NA	18	True	AATAAA	-32	NA	2019784	2020755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2020313_2020532
transcript_70618.known	chr16	+	2160	7	FSM	ENSG00000065054.14	ENST00000424542.7	2160	7	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_3	28.014381227426	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACACGCCTCTGTCTTTT	2024595	True	NA	10	True	GATAAA	-17	NA	2026901	2039026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2027219_2029581_2029783_2036323_2036504_2036727_2036882_2036954_2036999_2037537_2037601_2037825
transcript_70619.known	chr16	+	1564	7	FSM	ENSG00000065054.14	ENST00000432365.6	1564	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_6	75.3340707928506	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCCGCCCCCTCCCCTCA	2024621	True	NA	13	True	AATAAA	-27	NA	2026927	2038489	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2027219_2029581_2029783_2036323_2036504_2036727_2036882_2036954_2036999_2037537_2037601_2037858
transcript_70623.known	chr16	-	1030	6	FSM	ENSG00000065057.9	ENST00000651570.2	1030	6	0	0	0	0	multi-exon	FALSE	canonical	3	617	junction_3	22.7209154745138	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGATCTGGCTGATGTC	-2041567	True	NA	-6	True	AATAAA	-18	NA	2047834	2039819	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2040048_2040132_2040239_2043566_2043727_2044629_2044801_2046127_2046367_2047708
transcript_70624.nnic	chr16	-	1047	6	NNC	ENSG00000065057.9	novel	1030	6	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_5	248.142217286781	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGATCTGGCTGATGTC	-2041559	True	NA	-6	True	AATAAA	-18	NA	2047826	2039819	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_2040048_2040132_2040239_2043566_2043727_2044629_2044801_2046127_2046392_2047708
transcript_70625.known	chr16	-	837	6	FSM	ENSG00000065057.9	ENST00000568513.5	837	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	262.540968231627	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGGATCTGGCTGATGT	-2041527	True	NA	-7	True	AATAAA	-17	NA	2047794	2039820	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2040048_2040132_2040239_2043566_2043727_2044629_2044801_2046279_2046367_2047708
transcript_70627.known	chr16	-	802	5	FSM	ENSG00000065057.9	ENST00000651583.1	802	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	283.617149516738	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGGATCTGGCTGATGT	-2041511	True	NA	-7	True	AATAAA	-17	NA	2047778	2039820	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2040048_2040132_2040239_2043566_2043727_2046127_2046367_2047708
transcript_70636.known	chr16	+	5538	41	FSM	ENSG00000103197.18	ENST00000350773.9	5538	41	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_26	47.292150511475	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCTTTTATTGACTTTG	2043190	True	NA	36	True	NA	NA	NA	2048019	2088718	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2048066_2048586_2048754_2050399_2050487_2053341_2053453_2054295_2054441_2055401_2055520_2056195_2056245_2056643_2056770_2057104_2057179_2058746_2058874_2060669_2060814_2061870_2062009_2062496_2062601_2062971_2063054_2064271_2064428_2065518_2065636_2070455_2070579_2071509_2071617_2071783_2071935_2072240_2072364_2072848_2072984_2074199_2074390_2075798_2075893_2076067_2076171_2076490_2076586_2077597_2077727_2079031_2079197_2079275_2079429_2079556_2079670_2080164_2080378_2081594_2081799_2083694_2083817_2084227_2084716_2084950_2085027_2085229_2085323_2086192_2086380_2086731_2086872_2087862_2087942_2088047_2088140_2088226_2088326_2088445
transcript_70637.known	chr16	+	6344	41	FSM	ENSG00000103197.18	ENST00000643946.1	6344	41	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_34	52.713227704249	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACCGTCCAATACTGCTG	2043147	True	NA	NA	False	AATAAA	-19	NA	2047976	2089487	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2048066_2048586_2048754_2050399_2050487_2053341_2053453_2054295_2054441_2055401_2055520_2056195_2056245_2056643_2056770_2057104_2057179_2058746_2058874_2060669_2060814_2061870_2062009_2062496_2062601_2062971_2063054_2064271_2064428_2065518_2065636_2070455_2070579_2071509_2071617_2071783_2071935_2072240_2072364_2072848_2072984_2074199_2074390_2075798_2075893_2076067_2076171_2076490_2076586_2077597_2077727_2079031_2079197_2079275_2079429_2079556_2079670_2080164_2080378_2081594_2081799_2083694_2083817_2084227_2084716_2084950_2085027_2085235_2085323_2086192_2086380_2086731_2086872_2087862_2087942_2088047_2088140_2088226_2088326_2088445
transcript_70639.known	chr16	+	5388	40	FSM	ENSG00000103197.18	ENST00000642797.1	5388	40	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_25	42.572983318212	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCTTTTATTGACTTTG	2043211	True	NA	36	True	NA	NA	NA	2048040	2088718	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2048066_2048586_2048754_2050399_2050487_2053341_2053453_2054295_2054441_2055401_2055520_2056195_2056245_2056643_2056770_2057104_2057179_2058746_2058874_2060669_2060814_2061870_2062009_2062496_2062601_2062971_2063054_2064271_2064428_2065518_2065636_2070455_2070579_2071509_2071617_2071783_2071935_2072240_2072364_2072848_2072984_2074199_2074390_2075798_2075893_2076067_2076171_2076490_2076586_2079031_2079197_2079275_2079429_2079556_2079670_2080164_2080378_2081594_2081799_2083694_2083817_2084227_2084716_2084950_2085027_2085229_2085323_2086192_2086380_2086731_2086872_2087862_2087942_2088047_2088140_2088226_2088326_2088445
transcript_70641.known	chr16	+	5437	40	FSM	ENSG00000103197.18	ENST00000401874.7	5437	40	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_25	41.298690706164	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCTTTTATTGACTTTG	2043159	True	NA	36	True	NA	NA	NA	2047988	2088718	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2048066_2048586_2048754_2050399_2050487_2053341_2053453_2054295_2054441_2055401_2055520_2056195_2056245_2056643_2056770_2057104_2057179_2058746_2058874_2060669_2060814_2061870_2062009_2062496_2062601_2062971_2063054_2064271_2064428_2065518_2065636_2070455_2070579_2071509_2071617_2071783_2071935_2072240_2072364_2072848_2072984_2074199_2074390_2075798_2075893_2076067_2076171_2076490_2076586_2079034_2079197_2079275_2079429_2079556_2079670_2080164_2080378_2081594_2081799_2083694_2083817_2084227_2084716_2084950_2085027_2085229_2085323_2086192_2086380_2086731_2086872_2087862_2087942_2088047_2088140_2088226_2088326_2088445
transcript_70645.known	chr16	+	5264	39	FSM	ENSG00000103197.18	ENST00000382538.10	5264	39	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	49.9885651744421	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACAGATTGCAGTCAGACA	2043150	True	NA	18	True	AATAAA	-33	NA	2047979	2088700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2048066_2050399_2050487_2053341_2053453_2054295_2054441_2055401_2055520_2056195_2056245_2056643_2056770_2057104_2057179_2058746_2058874_2060669_2060814_2061870_2062009_2062496_2062601_2062971_2063054_2064271_2064428_2065518_2065636_2070455_2070579_2071509_2071617_2071783_2071935_2072240_2072364_2072848_2072984_2074199_2074390_2075798_2075893_2076067_2076171_2076490_2076586_2079031_2079197_2079275_2079429_2079556_2079670_2080164_2080378_2081594_2081799_2083694_2083817_2084227_2084716_2084950_2085027_2085229_2085323_2086192_2086380_2086731_2086872_2087862_2087942_2088047_2088140_2088226_2088326_2088445
transcript_7066.known	chr1	-	1395	3	FSM	ENSG00000233621.3	ENST00000424989.2	1419	3	21	3	1	0	multi-exon	FALSE	canonical	2	4	junction_2	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTTATTTTTCTCTGCTA	-37474330	True	NA	-5	True	AATAAA	-17	NA	37474411	37454878	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_37455913_37456366_37456460_37474143
transcript_70665.nic	chr16	+	3827	22	ISM	ENSG00000103197.18	ENST00000642936.1	5507	41	-12	13166	-3	280	5prime_fragment	FALSE	canonical	3	106	junction_5	16.2233559694523	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGCGGAAGCCTTTCCT	2043144	True	NA	NA	False	NA	NA	NA	2047973	2075550	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_2048066_2048586_2048754_2050399_2050487_2053341_2053453_2054295_2054441_2055401_2055520_2056195_2056245_2056643_2056770_2057104_2057179_2058746_2058874_2060669_2060814_2061870_2062009_2062496_2062601_2062971_2063054_2064271_2064428_2065518_2065636_2070455_2070579_2071509_2071617_2071783_2071935_2072240_2072364_2072848_2072984_2074199
transcript_70679.known	chr16	+	2433	15	FSM	ENSG00000103197.18	ENST00000644222.1	2433	15	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_5	17.7281052085584	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCAAGGCAGGCGGATCA	2043178	True	NA	NA	False	AAAAAG	-44	NA	2048007	2065174	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2048066_2048586_2048754_2050399_2050487_2053341_2053453_2054295_2054441_2055401_2055520_2056195_2056245_2056643_2056770_2057104_2057179_2058746_2058874_2060669_2060814_2061870_2062009_2062496_2062601_2062971_2063054_2064271
transcript_70686.known	chr16	+	2793	4	FSM	ENSG00000103197.18	ENST00000461648.3	2793	4	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	19.1543438647449	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTGCTTGAAACCGGAA	2043155	True	NA	NA	False	NA	NA	NA	2047984	2055799	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2048066_2048586_2048754_2050399_2050487_2053341
transcript_70688.nic	chr16	-	2378	4	ISM	ENSG00000008710.20	ENST00000262304.9	14140	46	44565	0	-494	0	3prime_fragment	FALSE	canonical	3	79	junction_1	11.0855260988773	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGCCTCTATGTCTGTG	-2091323	False	NA	-20	True	AATAAA	-19	NA	2091333	2088707	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_2090195_2090284_2090591_2090673_2090809_2090883
transcript_7069.known	chr1	+	2721	6	FSM	ENSG00000163874.11	ENST00000640233.1	2721	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	20.6842935581566	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGAGCCCTTTCAAGAG	37474021	True	NA	-3	True	AATAAA	-9	NA	37474579	37484360	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_37474630_37475458_37475940_37480289_37480430_37481600_37481836_37482349_37482541_37482736
transcript_70690.known	chr16	+	600	3	FSM	ENSG00000259933.6	ENST00000570072.5	600	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	6	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCCAGCACTTCAGGAG	2091342	True	NA	NA	False	GATAAA	-36	NA	2091435	2095017	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2091615_2092888_2093013_2094720
transcript_70692.known	chr16	+	335	4	FSM	ENSG00000103197.18	ENST00000642206.1	335	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	68.3634080159522	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGAAGGCCATCGTGCA	2043194	True	NA	NA	False	NA	NA	NA	2048023	2053425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2048066_2048586_2048754_2050399_2050487_2053386
transcript_70693.known	chr16	+	5287	39	FSM	ENSG00000103197.18	ENST00000439673.6	5287	39	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	49.5949591420254	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGATTGCAGTCAGACAG	2043184	True	NA	19	True	AATAAA	-34	NA	2048013	2088701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2048066_2048586_2048754_2050399_2050487_2054295_2054441_2055401_2055520_2056195_2056245_2056643_2056770_2057104_2057179_2058746_2058874_2060669_2060814_2061870_2062009_2062496_2062601_2062971_2063054_2064271_2064428_2065518_2065636_2070455_2070579_2071509_2071617_2071783_2071935_2072240_2072364_2072848_2072984_2074199_2074390_2075798_2075893_2076067_2076171_2076490_2076586_2079031_2079197_2079275_2079429_2079556_2079670_2080164_2080378_2081594_2081799_2083694_2083817_2084227_2084716_2084950_2085027_2085229_2085323_2086192_2086380_2086731_2086872_2087862_2087942_2088047_2088140_2088226_2088326_2088445
transcript_70695.known	chr16	+	1674	9	FSM	ENSG00000167964.13	ENST00000210187.11	1674	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	8.44744783943648	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCACTTCTAGAGCAGGAT	2148501	True	NA	31	True	AATAAA	-41	NA	2148624	2154165	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2148979_2149940_2150052_2151568_2151611_2151694_2151762_2151855_2151909_2152819_2152886_2152988_2153046_2153145_2153223_2153318
transcript_70696.known	chr16	+	1720	8	FSM	ENSG00000167964.13	ENST00000562735.5	1720	8	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_2	4.83608882280307	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCTAGTGAATAAAGTTGT	2148500	True	NA	-24	True	NA	NA	NA	2148623	2154110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2148979_2149940_2150052_2151568_2151611_2151694_2151762_2151855_2151909_2152819_2152886_2152988_2153223_2153318
transcript_70698.known	chr16	-	342	2	FSM	ENSG00000260260.2	ENST00000563192.2	394	2	47	5	0	0	multi-exon	FALSE	canonical	3	187	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTCTCAAGTGTCTTTA	-2149463	True	NA	-1	True	AATAAA	-23	NA	2155358	2154796	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2154923_2155142
transcript_7070.known	chr1	+	2654	6	FSM	ENSG00000163874.11	ENST00000373087.7	2654	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	9.75704873412037	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGATTGTCTTTGTTAT	37474021	True	NA	14	True	AATAAA	-26	NA	37474579	37484377	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_37474630_37475458_37475940_37480289_37480430_37481600_37481836_37482433_37482541_37482736
transcript_70717.known	chr16	+	3683	21	FSM	ENSG00000131653.13	ENST00000326181.11	3683	21	0	0	0	0	multi-exon	TRUE	canonical	3	969	junction_5	92.2297538758507	955	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCTGGGGGTGCGGTGGG	2146535	True	NA	15	True	AATAAA	-21	NA	2155781	2178129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2155859_2163882_2164002_2165878_2165937_2168076_2168169_2170613_2170731_2171263_2171357_2171571_2171606_2172190_2172375_2172464_2172600_2173181_2173400_2173480_2173555_2173787_2173837_2173920_2174049_2174250_2174334_2175110_2175151_2175300_2175418_2175499_2175623_2175833_2175954_2176048_2176181_2176264_2176385_2176559
transcript_7073.known	chr1	-	1408	8	FSM	ENSG00000163875.16	ENST00000475828.5	1408	8	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	145.724649491388	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAATTTCACAGGCTT	-37510716	True	NA	-49	True	TTTAAA	-37	NA	37514756	37493334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_37494108_37495884_37495919_37496546_37496605_37501803_37501997_37509277_37509324_37509454_37509543_37513422_37513539_37514656
transcript_7074.known	chr1	-	2147	8	FSM	ENSG00000163875.16	ENST00000373075.6	2147	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	180.676506497109	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTGACTCT	-37510723	True	NA	-3	True	AATAAA	-18	NA	37514763	37492574	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_37494108_37495884_37495919_37496706_37496737_37501803_37501997_37509277_37509324_37509454_37509543_37513422_37513539_37514656
transcript_7079.known	chr1	-	4702	7	FSM	ENSG00000163875.16	ENST00000296214.10	4702	7	0	0	0	0	multi-exon	TRUE	canonical	3	340	junction_4	34.3834585552737	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTGCTGATAATTGTTT	-37510726	True	NA	NA	False	AATAAA	-15	NA	37514766	37489992	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_37494108_37495884_37495919_37501803_37501997_37509277_37509324_37509454_37509543_37513422_37513539_37514656
transcript_70805.known	chr16	+	1671	9	FSM	ENSG00000167965.18	ENST00000569417.6	1671	9	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_1	139.865504592805	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGGCGAGGGTGCCG	2199266	True	NA	29	True	GATAAA	-19	NA	2205453	2209453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2205513_2206030_2206215_2206357_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
transcript_70809.known	chr16	+	1861	9	FSM	ENSG00000167965.18	ENST00000564088.5	1861	9	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	170.90768707112	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTTGCTCGGGAAGCAG	NA	False	NA	7	True	AATAAA	-16	NA	2205176	2209396	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2205513_2206060_2206215_2206357_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
transcript_70816.known	chr16	+	1691	9	FSM	ENSG00000167965.18	ENST00000397124.5	1691	9	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_1	127.60485884166	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTGCTCGGGAAGCAGA	2203731	True	NA	8	True	AATAAA	-17	NA	2205740	2209397	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2205876_2206030_2206215_2206357_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
transcript_7082.known	chr1	-	603	6	FSM	ENSG00000163875.16	ENST00000373073.8	603	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	149.693820847756	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAAATGTTCTCTGGTTT	-37510723	True	NA	NA	False	NA	NA	NA	37514763	37493761	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_37493815_37501803_37501997_37509277_37509324_37509454_37509543_37513422_37513539_37514656
transcript_70822.known	chr16	+	1588	9	FSM	ENSG00000167965.18	ENST00000565250.1	1588	9	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	184.059772900001	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGGGGCTCAGTCTGGGA	2203759	False	NA	-37	True	NA	NA	NA	2205768	2209352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2205876_2206060_2206215_2206357_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
transcript_70830.known	chr16	+	1403	8	FSM	ENSG00000167965.18	ENST00000565330.5	1403	8	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_1	148.199121427344	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGGGCTAGCCTGCACT	2199266	True	NA	NA	False	NA	NA	NA	2205453	2209098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2205513_2206030_2206215_2206357_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
transcript_70834.known	chr16	+	1865	8	FSM	ENSG00000167965.18	ENST00000568542.5	1865	8	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	180.9963355137	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGATGTTGCTCGGGAAG	2205245	True	NA	4	True	AATAAA	-13	NA	2205256	2209393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2205513_2206060_2206215_2206357_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
transcript_70842.nic	chr16	+	2066	8	NIC	ENSG00000167965.18	novel	1691	9	NA	NA	-1	0	intron_retention	FALSE	canonical	3	267	junction_1	135.251843700889	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTGCTCGGGAAGCAGA	2199265	True	NA	8	True	AATAAA	-17	NA	2205452	2209397	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_2205876_2206030_2206215_2206357_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
transcript_70861.known	chr16	-	826	6	FSM	ENSG00000182685.8	ENST00000328540.8	826	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	11.034491379307	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGGTGGTGTTCTCTA	-2204821	False	NA	0	True	AATAAA	-15	NA	2210863	2209252	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2209457_2209552_2209707_2209949_2210052_2210125_2210282_2210521_2210651_2210782
transcript_7087.known	chr1	-	4554	4	FSM	ENSG00000163877.11	ENST00000296215.8	4554	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	4.64279609239471	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTCTCTTGGGTAAAAT	-37552378	True	NA	0	True	ATTAAA	-22	NA	37554293	37534448	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_37538013_37540156_37540756_37552644_37552748_37554005
transcript_70876.known	chr16	-	3164	2	FSM	ENSG00000184207.9	ENST00000333503.8	3164	2	0	0	0	0	multi-exon	FALSE	canonical	3	1460	junction_1	0	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAAAATTAGCGGGACTT	-2208798	True	NA	NA	False	ACTAAA	-3	NA	2214840	2211592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2214054_2214137
transcript_70877.known	chr16	-	905	2	FSM	ENSG00000184207.9	ENST00000562001.1	905	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATCGGGTTCAGAGGGTG	-2213807	False	NA	NA	False	NA	NA	NA	2213899	2212261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2212848_2213580
transcript_70884.nic	chr16	+	2697	14	NIC	ENSG00000167967.16	novel	2548	14	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	45.0821734931215	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGATGTTGTGGCAGT	2222147	True	NA	15	True	AATAAA	-16	NA	2223600	2235742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_2223930_2228371_2228524_2229569_2229676_2232170_2232365_2232455_2232577_2232755_2232909_2233010_2233184_2233437_2233648_2233881_2233991_2234170_2234389_2234582_2234782_2234858_2235002_2235080_2235144_2235215
transcript_70886.known	chr16	+	2493	14	FSM	ENSG00000167967.16	ENST00000564139.5	2493	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	47.0521553751131	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGATGTTGTGGCAGT	2222140	True	NA	15	True	AATAAA	-16	NA	2223593	2235742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2223771_2228371_2228524_2229569_2229676_2232170_2232365_2232455_2232577_2232755_2232909_2233010_2233184_2233437_2233648_2233881_2233991_2234170_2234389_2234582_2234782_2234858_2234950_2235080_2235144_2235215
transcript_70887.nnic	chr16	+	2519	14	NNC	ENSG00000167967.16	novel	2548	14	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_12	42.9630362661568	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGATGTTGTGGCAGT	2222136	True	NA	15	True	AATAAA	-16	NA	2223589	2235742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_2223771_2228371_2228524_2229569_2229676_2232170_2232365_2232455_2232577_2232755_2232909_2233010_2233184_2233437_2233648_2233881_2233991_2234170_2234389_2234582_2234782_2234858_2234972_2235080_2235144_2235215
transcript_70888.known	chr16	+	2548	14	FSM	ENSG00000167967.16	ENST00000301727.9	2548	14	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_8	28.1872437471132	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGATGTTGTGGCAGT	2222137	True	NA	15	True	AATAAA	-16	NA	2223590	2235742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2223771_2228371_2228524_2229569_2229676_2232170_2232365_2232455_2232577_2232755_2232909_2233010_2233184_2233437_2233648_2233881_2233991_2234170_2234389_2234582_2234782_2234858_2235002_2235080_2235144_2235215
transcript_70901.nic	chr16	+	2625	13	NIC	ENSG00000167967.16	novel	2548	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	100	junction_8	28.4145893668884	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGATGTTGTGGCAGT	2222137	True	NA	15	True	AATAAA	-16	NA	2223590	2235742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_2223771_2228371_2228524_2229569_2229676_2232170_2232365_2232455_2232577_2232755_2232909_2233010_2233184_2233437_2233648_2233881_2233991_2234170_2234389_2234582_2235002_2235080_2235144_2235215
transcript_70906.nnic	chr16	+	2401	13	NIC	ENSG00000167967.16	novel	2548	14	NA	NA	-52	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_7	47.2308162114525	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGATGTTGTGGCAGT	2223410	False	NA	15	True	AATAAA	-16	NA	2223527	2235742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_2223771_2228371_2228524_2229569_2229676_2232170_2232365_2232455_2232577_2232755_2232909_2233010_2233184_2233881_2233991_2234170_2234389_2234582_2234782_2234858_2235002_2235080_2235144_2235215
transcript_7093.known	chr1	-	2350	16	FSM	ENSG00000134697.13	ENST00000373062.8	2350	16	0	0	0	0	multi-exon	FALSE	canonical	3	588	junction_9	51.119207088269	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGAAATTGTGTTTTCTT	-37589626	True	NA	-38	True	ATTAAA	-18	NA	37595937	37566815	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_37567008_37567672_37567765_37568274_37568358_37568850_37569303_37574342_37574457_37574664_37574824_37575594_37575700_37576427_37576557_37582222_37582337_37582777_37582937_37583866_37583934_37587310_37587496_37590705_37590846_37592711_37592807_37593761_37593847_37595758
transcript_70931.known	chr16	+	1349	7	FSM	ENSG00000167968.13	ENST00000320700.10	1349	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.21335164821342	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCTCCCAGGCCTCTG	2236423	True	NA	NA	False	AATAAA	-27	NA	2236443	2238711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2236561_2236777_2236961_2237037_2237127_2237217_2237302_2237375_2237650_2237766_2238019_2238361
transcript_70933.known	chr16	-	1507	7	FSM	ENSG00000167969.13	ENST00000301729.9	1507	7	0	0	0	0	multi-exon	FALSE	canonical	3	751	junction_6	107.867846099856	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTTGAAACAAAGGTTTTT	-2243571	True	NA	NA	False	NA	NA	NA	2251587	2239401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2240146_2243045_2243225_2243317_2243440_2244405_2244553_2246858_2246987_2251315_2251430_2251514
transcript_70934.known	chr16	-	948	7	FSM	ENSG00000167969.13	ENST00000562238.5	948	7	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_2	340.317702873196	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGCCAGCGTTTCATTT	-2243556	True	NA	-25	True	NA	NA	NA	2251572	2239894	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2240146_2243045_2243225_2243368_2243440_2244405_2244553_2246858_2246987_2251315_2251430_2251514
transcript_70937.nic	chr16	-	2181	6	ISM	ENSG00000167969.13	ENST00000301729.9	1507	7	-48	2274	-44	739	5prime_fragment	FALSE	canonical	3	751	junction_5	103.55597520182	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTTTCACATAATTTT	-2251621	False	NA	3	True	AAAACA	-28	NA	2251635	2241675	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_2243225_2243317_2243440_2244405_2244553_2246858_2246987_2251315_2251430_2251514
transcript_70946.known	chr16	-	705	4	FSM	ENSG00000167969.13	ENST00000561688.1	705	4	0	0	0	0	multi-exon	FALSE	canonical	3	751	junction_3	107.722895533968	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGGAGGCTGTGTGGGTG	-2243546	True	NA	NA	False	NA	NA	NA	2251562	2244137	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2244553_2246858_2246987_2251315_2251430_2251514
transcript_70954.known	chr16	-	2298	8	FSM	ENSG00000205937.12	ENST00000565678.5	2298	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1217.18172305485	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATGCAAATCTAGTTCTG	-2266955	False	NA	65	True	AATAAA	-10	NA	2267603	2253129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2254064_2255584_2255727_2262277_2262432_2262739_2262843_2263095_2263288_2264175_2264332_2264572_2264761_2267174
transcript_70955.known	chr16	-	1792	8	FSM	ENSG00000205937.12	ENST00000568631.5	1792	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1217.18172305485	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCAGCCGGGCCCCGGC	-2267181	False	27273	NA	False	NA	NA	NA	2267829	2253827	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2254064_2255584_2255727_2262277_2262432_2262739_2262843_2263095_2263288_2264175_2264332_2264572_2264761_2267208
transcript_70958.known	chr16	-	2069	8	FSM	ENSG00000205937.12	ENST00000397086.6	2069	8	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_7	1145.62539733562	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGGTTCACTGCCTTC	-2267200	False	27273	79	True	AATAAA	-24	NA	2267848	2253115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2254064_2255584_2255727_2262277_2262432_2262739_2262843_2263095_2263288_2264175_2264332_2264572_2264761_2267662
transcript_70959.known	chr16	-	1092	8	FSM	ENSG00000205937.12	ENST00000561518.5	1092	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	1214.17996178155	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGATCACGGTCCCCGGGC	-2267406	False	NA	NA	False	NA	NA	NA	2268054	2254028	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2254064_2255584_2255727_2262277_2262432_2262739_2262843_2263095_2263288_2264175_2264332_2264572_2264761_2267932
transcript_70960.known	chr16	-	1951	8	FSM	ENSG00000205937.12	ENST00000320225.10	1951	8	0	0	0	0	multi-exon	FALSE	canonical	3	902	junction_7	960.07244624602	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTTCTGGGTTCACTGC	-2267478	False	NA	75	True	AATAAA	-20	NA	2268126	2253119	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2254064_2255584_2255727_2262277_2262432_2262739_2262843_2263095_2263288_2264175_2264332_2264572_2264761_2268054
transcript_70968.known	chr16	-	2037	7	FSM	ENSG00000205937.12	ENST00000566458.5	2037	7	0	0	0	0	multi-exon	FALSE	canonical	3	1433	junction_6	696.613873597769	1494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTGGGTTCACTGCCTT	-2267749	True	NA	78	True	AATAAA	-23	NA	2268397	2253116	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2254064_2255584_2255727_2262277_2262432_2262739_2262843_2263095_2263288_2264175_2264332_2268054
transcript_70976.known	chr16	-	830	6	FSM	ENSG00000205937.12	ENST00000567147.5	830	6	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	1310.26766731077	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATTTGCAGGCAGCAGGC	-2240798	True	NA	NA	False	NA	NA	NA	2268071	2253855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2254064_2262277_2262432_2262739_2262843_2263095_2263288_2264175_2264332_2268054
transcript_70984.known	chr16	-	735	5	FSM	ENSG00000205937.12	ENST00000570051.5	735	5	0	0	0	0	multi-exon	FALSE	canonical	3	1433	junction_4	808.906360464547	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTGGGCTGCACTTCTT	-2240841	True	NA	NA	False	GGGGCT	-14	NA	2268114	2262207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2262432_2262739_2262843_2263095_2263288_2264175_2264332_2268054
transcript_70995.known	chr16	-	6602	33	FSM	ENSG00000167972.14	ENST00000301732.10	6602	33	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_19	7.84393675076489	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACAGTCTGTGGGTCACA	-2340002	True	NA	-3	True	AATAAA	-16	NA	2340728	2275880	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2276806_2277596_2277671_2277878_2278070_2278287_2278459_2278942_2279131_2281026_2281222_2281380_2281510_2283185_2283359_2284278_2284438_2284778_2284999_2285441_2285647_2286693_2286968_2288025_2288330_2289433_2289621_2292139_2292239_2295589_2295741_2297328_2297540_2297765_2297922_2298385_2298541_2299402_2299533_2300004_2300149_2303968_2304151_2308449_2308624_2317282_2317404_2317647_2317765_2319580_2319841_2323522_2323689_2324403_2324532_2326009_2326275_2326412_2326493_2328452_2328758_2329647_2329855_2340572
transcript_710.known	chr1	-	485	4	FSM	ENSG00000127054.22	ENST00000534345.5	485	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	229.341569619543	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGTCCAGGTCAGGTTCC	-1318748	True	NA	NA	False	NA	NA	NA	1324671	1319305	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1319525_1320455_1320530_1320995_1321097_1324580
transcript_71000.known	chr16	+	4230	17	FSM	ENSG00000162063.13	ENST00000397066.9	4230	17	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_1	32.8718510849328	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGTGATGGACGTCCTT	2424727	True	NA	30	True	ATTAAA	-20	NA	2429446	2458854	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2429498_2431129_2431285_2432960_2433068_2435805_2435874_2437128_2437323_2438069_2438124_2439352_2439458_2439748_2439827_2443648_2443801_2445457_2445623_2448854_2448979_2449281_2449463_2449827_2449916_2453209_2453310_2453409_2453538_2455394_2455565_2456544
transcript_71007.known	chr16	+	4173	16	FSM	ENSG00000162063.13	ENST00000293968.11	4173	16	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	113.313410013506	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGATGAGTGATGGACGTC	2424674	True	NA	27	True	ATTAAA	-17	NA	2429393	2458851	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2429498_2431129_2431285_2435805_2435874_2437128_2437323_2438069_2438124_2439352_2439458_2439748_2439827_2443648_2443801_2445457_2445623_2448854_2448979_2449281_2449463_2449827_2449916_2453209_2453310_2453409_2453538_2455394_2455565_2456544
transcript_71030.known	chr16	+	857	4	FSM	ENSG00000162063.13	ENST00000569093.1	857	4	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_1	26.9485105752103	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGTGCTCCTTGAAAGAAA	2424729	True	NA	NA	False	NA	NA	NA	2429448	2436351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2429498_2431129_2431285_2432960_2433068_2435805
transcript_71033.known	chr16	+	1633	10	FSM	ENSG00000162062.15	ENST00000361837.9	1633	10	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	37.0618435444539	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTATTTATGTTTT	2456231	True	NA	17	True	ATTAAA	-17	NA	2460108	2464963	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2460171_2460282_2460382_2460622_2460694_2460815_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630_2462733_2464038_2464230_2464521
transcript_71035.known	chr16	+	1864	9	FSM	ENSG00000162062.15	ENST00000563531.5	1864	9	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	35.5824307067407	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGCTTGTGTGATATTAAA	2456256	True	NA	-19	True	NA	NA	NA	2460133	2464927	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2460171_2460282_2460382_2460622_2460694_2460815_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630_2462733_2464038
transcript_71038.nic	chr16	+	1900	9	NIC	ENSG00000162062.15	novel	1633	10	NA	NA	-3	0	intron_retention	FALSE	canonical	3	148	junction_1	37.6029835917311	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTATTTATGTTTT	2456205	True	NA	17	True	ATTAAA	-17	NA	2460082	2464963	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_2460171_2460282_2460694_2460815_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630_2462733_2464038_2464230_2464521
transcript_71039.nic	chr16	+	1560	9	NIC	ENSG00000162062.15	novel	1633	10	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	74.7394432344796	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTATTTATGTTTT	2456205	True	NA	17	True	ATTAAA	-17	NA	2460082	2464963	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_2460171_2460622_2460694_2460815_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630_2462733_2464038_2464230_2464521
transcript_71044.known	chr16	+	2156	8	FSM	ENSG00000162062.15	ENST00000569994.5	2156	8	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	35.1271742009934	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGTTTATTTATGTTT	2456240	True	NA	16	True	ATTAAA	-16	NA	2460117	2464962	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2460171_2460282_2460694_2460815_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630_2462733_2464038
transcript_71046.nic	chr16	+	1851	8	NIC	ENSG00000162062.15	novel	2156	8	NA	NA	-3	0	intron_retention	FALSE	canonical	3	20	junction_1	78.8216793963256	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGTTTATTTATGTTT	2456205	True	NA	16	True	ATTAAA	-16	NA	2460082	2464962	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_2460171_2460622_2460694_2460815_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630_2462733_2464038
transcript_71068.known	chr16	+	1709	9	FSM	ENSG00000162062.15	ENST00000483320.5	1709	9	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_8	29.0729148005493	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTATTTATGTTTT	2456267	True	NA	17	True	ATTAAA	-17	NA	2460144	2464963	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2460382_2460622_2460694_2460815_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630_2462733_2464038_2464230_2464521
transcript_71074.known	chr16	+	3172	11	FSM	ENSG00000162066.16	ENST00000293971.11	3172	11	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_8	26.6915717034423	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGCAGTTCTGTGACAT	2517578	True	NA	26	True	AATACA	-22	NA	2520370	2531417	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2520542_2520768_2520906_2520983_2521124_2527560_2527616_2527772_2527986_2528059_2528149_2528235_2528381_2528451_2528560_2528649_2528719_2528993_2529096_2529474
transcript_7108.nic	chr1	-	2083	14	ISM	ENSG00000134697.13	ENST00000373062.8	2350	16	-44	1486	-44	-1481	5prime_fragment	FALSE	canonical	3	588	junction_7	47.2156076892743	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGGAAGAAGATGTAGAT	-37589670	True	NA	19	True	AAGAAA	-3	NA	37595981	37568301	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_37568358_37568850_37569303_37574342_37574457_37574664_37574824_37575594_37575700_37576427_37576557_37582222_37582337_37582777_37582937_37583866_37583934_37587310_37587496_37590705_37590846_37592711_37592807_37593761_37593847_37595758
transcript_71083.known	chr16	+	2890	10	FSM	ENSG00000162066.16	ENST00000648227.1	2890	10	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_8	51.0315806361338	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGATGGTTGGTCCACA	2517604	True	NA	NA	False	GGGGCT	-2	NA	2520396	2531230	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2520542_2520768_2520906_2520983_2521124_2527560_2527616_2527772_2527986_2528059_2528149_2528235_2528381_2528451_2528560_2528993_2529096_2529474
transcript_71085.known	chr16	+	3273	10	FSM	ENSG00000162066.16	ENST00000302956.8	3273	10	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_4	19.5448202856921	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTTCTGTGACATGAAGT	2517572	True	NA	31	True	AATACA	-27	NA	2520364	2531422	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2520542_2520768_2520906_2520983_2521124_2527560_2527616_2527772_2527986_2528059_2528149_2528235_2528381_2528451_2528719_2528993_2529096_2529474
transcript_71091.nic	chr16	+	3167	10	NIC	ENSG00000162066.16	novel	3172	11	NA	NA	-36	0	intron_retention	TRUE	canonical	3	16	junction_3	53.103672189407	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGCAGTTCTGTGACAT	2520093	False	NA	26	True	AATACA	-22	NA	2520320	2531417	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_2520542_2520768_2520906_2520983_2521124_2527772_2527986_2528059_2528149_2528235_2528381_2528451_2528560_2528649_2528719_2528993_2529096_2529474
transcript_711.known	chr1	-	704	4	FSM	ENSG00000127054.22	ENST00000490853.5	704	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	228.948805534241	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCGAGGCCAACTTCTTCA	-1318726	True	NA	NA	False	NA	NA	NA	1324649	1319380	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1319844_1320455_1320530_1320995_1321094_1324580
transcript_71100.known	chr16	+	1117	9	FSM	ENSG00000162066.16	ENST00000563633.5	1117	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	55.7539236287456	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAAGGGGACCCTGGACT	2517600	True	NA	NA	False	GGGGCT	-7	NA	2520392	2529060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2520542_2520768_2520906_2520983_2521124_2527772_2527986_2528059_2528149_2528235_2528381_2528451_2528560_2528649_2528719_2528993
transcript_71123.known	chr16	+	6673	7	FSM	ENSG00000162065.14	ENST00000567020.6	6673	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	3.34995854037363	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACTGTGAAATAACTTGC	2475029	False	NA	21	True	AATAAA	-22	NA	2475050	2505734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2475171_2496033_2497114_2498237_2498397_2499356_2499421_2499834_2499931_2500267_2500491_2500803
transcript_71145.known	chr16	+	1093	3	FSM	ENSG00000185883.12	ENST00000330398.9	1093	3	0	0	0	0	multi-exon	FALSE	canonical	3	1482	junction_1	27	655	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGCCTGTGTCTGCTCAGC	2497202	True	NA	23	True	AATAAA	-15	NA	2513951	2520218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2514183_2519217_2519402_2519540
transcript_71147.known	chr16	+	3061	8	FSM	ENSG00000162065.14	ENST00000569874.2	3061	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	9.3917028079392	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAACTCCAGGGCTCCAAG	2474124	True	NA	23	True	ATTAAA	-15	NA	2475126	2502855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2475171_2496033_2497114_2498237_2498397_2499356_2499421_2499834_2499931_2500267_2500491_2500803_2501053_2501709
transcript_7115.known	chr1	+	2628	6	FSM	ENSG00000163879.11	ENST00000652629.1	2628	6	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_3	13.3266649991661	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTTGTCTGAATTTTT	37555445	True	NA	15	True	AATAAA	-17	NA	37556939	37566857	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_37557076_37557602_37557749_37559326_37559497_37561556_37561736_37562080_37562246_37565025
transcript_71153.nic	chr16	+	2110	15	NIC	ENSG00000140992.19	novel	2416	14	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	18.9084799030725	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACCCAACCACACAAAGAAC	2536699	True	NA	NA	False	AAGAAA	-14	NA	2537987	2597928	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_2538137_2538618_2538772_2557702_2557964_2561479_2561523_2561770_2561909_2565552_2565698_2566355_2566454_2577424_2577501_2581294_2581364_2581606_2581704_2583411_2583586_2586675_2586894_2595792_2595851_2597122_2597276_2597650
transcript_71156.known	chr16	+	7184	14	FSM	ENSG00000140992.19	ENST00000342085.9	7184	14	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_11	7.26424330327879	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTTTGCTGGCGTGGCTC	2536732	True	NA	4	True	AATAAA	-17	NA	2538020	2603188	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2538137_2557702_2557964_2561479_2561523_2561770_2561909_2565552_2565698_2566355_2566454_2577424_2577501_2581294_2581364_2581606_2581704_2583411_2583586_2586675_2586894_2595792_2595851_2597122_2597276_2597650
transcript_71158.nnic	chr16	+	1897	13	NIC	ENSG00000140992.19	novel	7184	14	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_6	15.1455897504484	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACCCAACCACACAAAGAAC	2536683	True	NA	NA	False	AAGAAA	-14	NA	2537971	2597928	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_2538137_2557702_2557964_2561479_2561523_2561770_2561909_2565552_2565698_2566355_2566454_2581294_2581364_2581606_2581704_2583411_2583586_2586675_2586894_2595792_2595851_2597122_2597276_2597650
transcript_71160.nnic	chr16	+	1690	12	NIC	ENSG00000140992.19	novel	7184	14	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	15.6210284208697	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACCCAACCACACAAAGAAC	2536683	True	NA	NA	False	AAGAAA	-14	NA	2537971	2597928	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_2538137_2557702_2557964_2561479_2561523_2566355_2566454_2577424_2577501_2581294_2581364_2581606_2581704_2583411_2583586_2586675_2586894_2595792_2595851_2597122_2597276_2597650
transcript_71161.known	chr16	+	4728	11	FSM	ENSG00000140992.19	ENST00000268673.11	4728	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	16.6252819524963	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGATTTCTTACTTTT	2536714	True	NA	11	True	TTTAAA	-27	NA	2538002	2601095	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2538137_2557702_2557964_2561479_2561523_2577424_2577501_2581294_2581364_2581606_2581704_2583411_2583586_2586675_2586894_2595792_2595851_2597122_2597276_2597650
transcript_71165.nic	chr16	+	1118	7	NIC	ENSG00000140992.19	novel	1729	12	NA	NA	-7	0	combination_of_known_junctions	TRUE	canonical	1	2	junction_6	21.9241115365405	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTGGGTTGACTCGTGG	2536683	True	NA	NA	False	ATTAAA	-20	NA	2537971	2571341	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_2538137_2557702_2557964_2561479_2561523_2561770_2561909_2565552_2565698_2566355_2566454_2571073
transcript_71168.known	chr16	+	1125	3	FSM	ENSG00000140992.19	ENST00000570136.5	1125	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	3	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGGTGGAAGTTGGGGTGG	2536732	True	NA	NA	False	ATTAAA	-29	NA	2538020	2562227	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2538137_2557702_2557964_2561479
transcript_71171.known	chr16	+	2748	4	FSM	ENSG00000215154.6	ENST00000399702.5	2748	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	2.49443825784929	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAGAAAATAAGTTACTA	NA	False	NA	NA	False	AATAAA	-23	NA	2603349	2630494	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2603728_2610461_2611053_2613959_2614069_2628824
transcript_71181.known	chr16	+	2434	6	FSM	ENSG00000167977.9	ENST00000301738.9	2434	6	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_3	26.8894031172133	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGCGTAGTAGCTGTTTAT	2675632	True	NA	16	True	AATAAA	-17	NA	2682522	2709030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2682801_2695934_2696044_2697905_2697998_2699820_2699917_2702352_2702479_2707297
transcript_71182.known	chr16	+	774	5	FSM	ENSG00000167977.9	ENST00000564195.1	774	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	174.195830891557	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGAGAGACGGGCCCAGC	2675649	True	NA	NA	False	NA	NA	NA	2682539	2707479	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2682801_2695934_2696044_2699820_2699917_2702352_2702479_2707297
transcript_71186.known	chr16	-	1135	6	FSM	ENSG00000172382.10	ENST00000302641.8	1135	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	3.05941170815567	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCCACGTGGGGATCCT	-2720205	False	NA	-5	True	AATAAA	-19	NA	2720224	2712421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2712815_2713528_2713699_2714064_2714337_2715717_2715881_2716499_2716527_2720114
transcript_71188.known	chr16	-	1297	5	FSM	ENSG00000172382.10	ENST00000565903.5	1297	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	4.03112887414927	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGCCCACGTGGGGATC	-2720532	False	NA	-7	True	AATAAA	-17	NA	2720551	2712423	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2712815_2713528_2713699_2714064_2714337_2716499_2716527_2720114
transcript_71196.known	chr16	+	3314	11	FSM	ENSG00000167978.17	ENST00000576924.5	3314	11	0	0	0	0	multi-exon	TRUE	canonical	3	324	junction_1	444.163269530473	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAGTCTAAAGACTCACT	2752530	False	NA	NA	False	NA	NA	NA	2752625	2763582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2752855_2756333_2756607_2757471_2757580_2757780_2757946_2758469_2758548_2758984_2759048_2759139_2759173_2759351_2759403_2759568_2759662_2760300_2760500_2761560
transcript_71199.known	chr16	+	2870	10	FSM	ENSG00000167978.17	ENST00000571378.5	2870	10	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	514.906463997751	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATTTCACCATACCCCAA	2717066	True	NA	NA	False	NA	NA	NA	2752715	2763501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2752855_2757471_2757580_2757780_2757946_2758469_2758548_2758984_2759048_2759139_2759173_2759351_2759403_2759568_2759662_2760300_2760500_2761560
transcript_71205.nic	chr16	+	1427	5	ISM	ENSG00000167978.17	ENST00000301740.13	9044	15	-617	12888	-605	0	5prime_fragment	FALSE	canonical	3	879	junction_1	409.109398572069	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAGAAAGATAGAGG	2751821	True	NA	39	True	NA	NA	NA	2752020	2758524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_2752847_2756333_2756607_2757471_2757580_2757780_2757946_2758469
transcript_71209.known	chr16	-	582	5	FSM	ENSG00000103363.16	ENST00000262306.11	582	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	3294.45192710411	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTGCATTTCTCATTTT	-2700877	True	NA	-3	True	AATAAA	-16	NA	2777277	2771413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2771605_2771993_2772103_2775450_2775557_2776992_2777128_2777236
transcript_7121.known	chr1	-	539	2	FSM	ENSG00000134697.13	ENST00000488496.1	539	2	0	0	0	0	multi-exon	FALSE	canonical	3	680	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTTAAATATGGCCAGATA	-37589624	True	NA	NA	False	ATTAAA	-6	NA	37595935	37593484	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_37593847_37595758
transcript_71214.known	chr16	+	461	4	FSM	ENSG00000167978.17	ENST00000576415.5	461	4	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_1	712.08348449384	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAGAAAGATAGAGG	2717064	True	NA	39	True	NA	NA	NA	2752713	2758524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2752847_2757471_2757580_2757780_2757946_2758469
transcript_71219.known	chr16	-	974	4	FSM	ENSG00000103363.16	ENST00000409906.9	974	4	0	0	0	0	multi-exon	FALSE	canonical	3	5348	junction_3	1397.77465995059	2010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTGCATTTCTCATTTT	-2700880	True	NA	-3	True	AATAAA	-16	NA	2777280	2771413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2772103_2775450_2775557_2776992_2777128_2777236
transcript_71226.known	chr16	-	331	3	FSM	ENSG00000103363.16	ENST00000572954.1	331	3	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_1	2468.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTTGCTGCCTCTTT	-2700872	True	NA	-7	True	AATAAA	-16	NA	2777272	2771942	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2772103_2776992_2777128_2777236
transcript_71229.known	chr16	+	9044	15	FSM	ENSG00000167978.17	ENST00000301740.13	9044	15	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_12	682.157157666107	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGTCTGTAGACTGTTTA	2752542	False	NA	17	True	AATAAA	-18	NA	2752637	2771412	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2752847_2756333_2756607_2757471_2757580_2757780_2757946_2758469_2758548_2758984_2759048_2759139_2759173_2759351_2759403_2759568_2759662_2760300_2760500_2761560_2768262_2768996_2769285_2770351_2770466_2770603_2770718_2770857
transcript_71230.known	chr16	+	1759	3	FSM	ENSG00000167978.17	ENST00000574331.5	1759	3	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	33	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGGTCTGTAGACTGTT	2769346	False	NA	15	True	AATAAA	-16	NA	2769373	2771410	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2770466_2770603_2770718_2770857
transcript_71231.known	chr16	-	997	3	FSM	ENSG00000103363.16	ENST00000409477.1	997	3	0	0	0	0	multi-exon	FALSE	canonical	3	7310	junction_1	724.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCCTGCATTTCTCATTT	-2700795	True	NA	-4	True	AATAAA	-15	NA	2777195	2771414	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2772103_2775450_2775557_2776992
transcript_71232.known	chr16	-	472	3	FSM	ENSG00000103363.16	ENST00000494946.6	472	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	3639	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTTGCTGCCTCTTTTT	-2700727	True	NA	-5	True	AATAAA	-18	NA	2777127	2771940	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2772103_2775450_2775626_2776992
transcript_71233.known	chr16	+	3250	1	FSM	ENSG00000276791.1	ENST00000621230.1	3250	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGAGTTCTGTGCATCG	2777179	False	NA	4	True	AATAAA	-15	NA	2777318	2780568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2777300_2780600
transcript_71235.known	chr16	-	2855	2	FSM	ENSG00000172460.18	ENST00000476276.5	2855	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTGCTTTTCTAGTAA	NA	False	NA	NA	False	AATAAA	-28	NA	2842638	2839567	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2839932_2840147
transcript_71239.known	chr16	-	1383	6	FSM	ENSG00000005001.10	ENST00000161006.8	1383	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	4.04969134626332	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGTTTTTTCCCATGC	-2858147	True	NA	-3	True	AATAAA	-15	NA	2858170	2852729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2853330_2853864_2854023_2855573_2855852_2856081_2856254_2856821_2856849_2858022
transcript_71240.known	chr16	-	761	3	FSM	ENSG00000263280.3	ENST00000662388.1	761	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAGTCGGAGTACTCTG	NA	False	NA	NA	False	AATAAA	-38	NA	2868251	2866324	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2866857_2867460_2867530_2868091
transcript_71243.nnic	chr16	+	1173	5	NNC	ENSG00000162076.13	novel	990	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	81.863835116613	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCAGGTTTTAAACATCC	2880923	True	NA	16	True	AATAAA	-26	NA	2883214	2899365	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_2883367_2895219_2895321_2896351_2896772_2898775_2898959_2899048
transcript_71244.known	chr16	+	990	4	FSM	ENSG00000162076.13	ENST00000396958.8	990	4	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	4.96655480858378	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCAGGTTTTAAACATCC	2880923	True	NA	16	True	AATAAA	-26	NA	2883214	2899365	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2883367_2895219_2895321_2896351_2896772_2899048
transcript_71245.known	chr16	+	754	3	FSM	ENSG00000162076.13	ENST00000572006.1	754	3	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAGAGCAGTGGCACAGG	2880967	True	NA	NA	False	NA	NA	NA	2883258	2896896	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2883367_2895219_2895321_2896351
transcript_71246.nic	chr16	+	1230	3	NIC	ENSG00000162076.13	novel	990	4	NA	NA	-339	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	86	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCAGGTTTTAAACATCC	2882844	True	NA	16	True	AATAAA	-26	NA	2882873	2899365	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_2883367_2896351_2896772_2899048
transcript_71255.known	chr16	+	4963	10	FSM	ENSG00000059122.17	ENST00000416288.6	4963	10	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	20.4613456709637	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAACGTATCAACTAAGAA	2910790	True	NA	NA	False	AATAAA	-14	NA	2911998	2951199	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2912155_2914175_2914290_2929612_2930011_2930412_2930881_2933129_2933583_2933715_2933980_2937120_2937385_2938183_2938457_2940031_2940093_2948687
transcript_7126.known	chr1	-	2696	5	FSM	ENSG00000116922.15	ENST00000486637.2	2696	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_4	100.193562667469	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGTGTCAAGTCTTATG	-37686749	True	NA	0	True	AATAAA	-13	NA	37690529	37681569	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_37683161_37683318_37683438_37686272_37686453_37689605_37689884_37690001
transcript_7127.known	chr1	-	919	5	FSM	ENSG00000116922.15	ENST00000464085.5	919	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	112.422195317473	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGGAGACCACGGGTAC	-37686724	True	NA	NA	False	NA	NA	NA	37690504	37683110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_37683161_37683318_37683438_37686272_37686453_37689605_37689887_37690215
transcript_71271.known	chr16	+	1995	9	FSM	ENSG00000131650.14	ENST00000303746.10	1995	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	5.71046189025021	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCCTCGAAAGTTCTTCC	2964070	True	NA	4	True	AATAAA	-16	NA	2964274	2968380	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2964615_2964858_2965034_2966139_2966232_2966324_2966450_2966641_2966796_2966909_2967243_2967319_2967446_2967525_2967605_2967809
transcript_71272.known	chr16	+	1877	9	FSM	ENSG00000131650.14	ENST00000571007.5	1877	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	12.7273082385868	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGGCCTCGAAAGTTCTTC	2964070	True	NA	3	True	AATAAA	-15	NA	2964274	2968379	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2964615_2964858_2965034_2966139_2966232_2966324_2966450_2966758_2966796_2966909_2967243_2967319_2967446_2967525_2967605_2967809
transcript_71274.known	chr16	-	1806	9	FSM	ENSG00000127564.17	ENST00000574730.5	1806	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_7	189.988445372344	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGTGTCTAATAAAAAGTAT	-2971366	True	NA	-64	True	NA	NA	NA	2980439	2972848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2973065_2973137_2973216_2973999_2974158_2974244_2974418_2974549_2974657_2975318_2975813_2976663_2976825_2979647_2979913_2980285
transcript_71278.known	chr16	-	2061	9	FSM	ENSG00000127564.17	ENST00000262300.13	2061	9	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_7	57.0360357581065	915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGCTCATGTGGCAACAT	-2971373	True	NA	-23	True	AATAAA	-28	NA	2980446	2972807	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2973065_2973137_2973216_2973999_2974158_2974244_2974418_2974549_2974657_2975318_2975813_2976663_2977032_2979647_2979913_2980285
transcript_7128.known	chr1	-	2355	5	FSM	ENSG00000116922.15	ENST00000358011.8	2355	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	117.885537705013	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGTGTCAAGTCTTATG	-37686740	True	NA	0	True	AATAAA	-13	NA	37690520	37681569	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_37683161_37683318_37683438_37686272_37686453_37689605_37689884_37690333
transcript_71280.nic	chr16	-	2181	9	NIC	ENSG00000127564.17	novel	2061	9	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_8	174.613099093396	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGCCCTTCCTGTCCCTT	-2971452	True	NA	-6	True	AATAAA	-45	NA	2980525	2972790	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_2973065_2973137_2973216_2973999_2974158_2974244_2974418_2974549_2974657_2975318_2975813_2976663_2977032_2979647_2979937_2980285
transcript_71284.known	chr16	-	1891	9	FSM	ENSG00000127564.17	ENST00000573944.5	1891	9	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_7	171.8245835147	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCGTGTCTAATAAAAAGT	-2971406	True	NA	-66	True	NA	NA	NA	2980479	2972850	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2973065_2973137_2973216_2973999_2974158_2974244_2974418_2974549_2974657_2975318_2975813_2976663_2977032_2979807_2979913_2980285
transcript_71285.known	chr16	-	1892	9	FSM	ENSG00000127564.17	ENST00000574385.5	1892	9	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_8	226.08225826013	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCACCCAAGCTTGCTCA	-2971351	True	NA	-34	True	AATAAA	-17	NA	2980424	2972818	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2973065_2973137_2973216_2973999_2974158_2974244_2974418_2974549_2974657_2975318_2975813_2976663_2977032_2979807_2979937_2980285
transcript_7129.nic	chr1	-	2731	5	NIC	ENSG00000116922.15	novel	2696	5	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_4	112.034313939971	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGTGTCAAGTCTTATG	-37686781	True	NA	0	True	AATAAA	-13	NA	37690561	37681569	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_37683161_37683318_37683438_37686272_37686453_37689605_37689887_37690001
transcript_71293.known	chr16	-	2061	9	FSM	ENSG00000127564.17	ENST00000440027.6	2061	9	0	0	0	0	multi-exon	TRUE	canonical	2	15	junction_2	181.416948973904	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGCCCTTCCTGTCCCTT	-2980355	False	9073	-6	True	AATAAA	-45	NA	2980391	2972790	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_2973065_2973137_2973254_2973999_2974158_2974244_2974418_2974549_2974657_2975318_2975813_2976663_2977032_2979647_2979913_2980285
transcript_713.known	chr1	-	773	4	FSM	ENSG00000127054.22	ENST00000532952.5	773	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	232.718714331272	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACTGCATGAAGAAGGT	-1318719	True	NA	NA	False	NA	NA	NA	1324642	1319346	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1319886_1320455_1320530_1320995_1321094_1324580
transcript_71302.known	chr16	+	1922	8	FSM	ENSG00000131650.14	ENST00000575769.1	1922	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_7	4.86553896169326	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAGATTTTGAATAAAGGA	2964498	False	NA	-28	True	AAAACA	-14	NA	2964520	2968348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2964615_2964858_2965034_2966139_2966232_2966324_2966450_2966641_2966796_2966909_2967243_2967319_2967446_2967525
transcript_71303.known	chr16	+	1882	8	FSM	ENSG00000131650.14	ENST00000319500.10	1882	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	9.81876587282262	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCGAAAGTTCTTCCGTG	2964289	True	NA	7	True	AATAAA	-19	NA	2964311	2968383	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2964615_2964858_2965034_2966139_2966232_2966324_2966450_2966641_2966796_2966909_2967243_2967319_2967446_2967809
transcript_71304.known	chr16	+	1798	8	FSM	ENSG00000131650.14	ENST00000575885.5	1798	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	15.2020406793406	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGGCCTCGAAAGTTCTTC	2964070	True	NA	3	True	AATAAA	-15	NA	2964274	2968379	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2964615_2964858_2965034_2966139_2966232_2966324_2966450_2966758_2966796_2966909_2967243_2967319_2967446_2967809
transcript_71320.known	chr16	+	2339	7	FSM	ENSG00000131650.14	ENST00000572045.5	2339	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	4.42530601578392	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCCTCGAAAGTTCTTCC	2964173	False	NA	4	True	AATAAA	-16	NA	2964215	2968380	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2964615_2964858_2965034_2966139_2966232_2966324_2966450_2966641_2966796_2966909_2967243_2967319
transcript_71338.known	chr16	+	2685	3	FSM	ENSG00000162073.14	ENST00000318782.9	2685	3	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	24	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCTGGAACTTCTTGT	2967664	True	NA	12	True	AATAAA	-17	NA	2969347	2973484	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2969841_2971156_2971379_2971514
transcript_71339.known	chr16	+	2644	3	FSM	ENSG00000162073.14	ENST00000293978.12	2644	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	55.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTTCTGGAACTTCTT	2967586	True	NA	10	True	AATAAA	-15	NA	2969269	2973482	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2969841_2971273_2971379_2971514
transcript_71341.known	chr16	+	842	3	FSM	ENSG00000162073.14	ENST00000576565.1	842	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	58.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGGATGCTTCCAGCTC	2967657	True	NA	NA	False	GGGGCT	-4	NA	2969340	2972031	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2969444_2971156_2971379_2971514
transcript_71343.known	chr16	+	2251	2	FSM	ENSG00000162073.14	ENST00000572687.1	2251	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTTCTGGAACTTCTT	2969473	True	NA	10	True	AATAAA	-15	NA	2969557	2973482	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_2969841_2971514
transcript_71355.known	chr16	+	1583	1	FSM	ENSG00000213937.4	ENST00000445369.3	1583	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCCTCTAATCTGTGCGC	3012854	True	NA	NA	False	AATAAA	-17	NA	3012922	3014505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3012900_3014500
transcript_71356.known	chr16	+	977	4	FSM	ENSG00000006327.14	ENST00000326577.9	977	4	0	0	0	0	multi-exon	FALSE	canonical	3	1417	junction_1	109.42374310704	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTGGAGAGGCAGTGAT	3010371	True	NA	18	True	AATAAA	-19	NA	3020367	3022383	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3020492_3021214_3021320_3021554_3021690_3021770
transcript_71360.known	chr16	+	881	3	FSM	ENSG00000006327.14	ENST00000341627.5	881	3	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	766.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTGGAGAGGCAGTGAT	3010362	True	NA	18	True	AATAAA	-19	NA	3020358	3022383	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3020492_3021554_3021690_3021770
transcript_71361.known	chr16	+	1678	3	FSM	ENSG00000006327.14	ENST00000571351.1	1678	3	0	0	0	0	multi-exon	FALSE	canonical	3	1616	junction_2	28	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTGGAGAGGCAGTGAT	3010393	True	NA	18	True	AATAAA	-19	NA	3020389	3022383	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3021320_3021554_3021690_3021770
transcript_71362.known	chr16	+	1300	14	FSM	ENSG00000131652.14	ENST00000574549.5	1300	14	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	318.157472825632	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTCTTTCTATGAATGG	3017980	True	NA	64	True	AATAAA	-22	NA	3024040	3027755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3024087_3024192_3024366_3025711_3025824_3025923_3025989_3026062_3026167_3026250_3026289_3026364_3026414_3026515_3026588_3026678_3026782_3026866_3026917_3027010_3027074_3027169_3027281_3027365_3027501_3027576
transcript_71364.known	chr16	+	1360	13	FSM	ENSG00000131652.14	ENST00000575576.5	1360	13	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	247.355625680023	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTACAATAAAGTTTCAGG	3017993	True	NA	31	True	NA	NA	NA	3024053	3027722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3024366_3025711_3025824_3025923_3025989_3026062_3026167_3026250_3026289_3026364_3026414_3026515_3026588_3026678_3026782_3026866_3026917_3027010_3027074_3027169_3027281_3027365_3027501_3027576
transcript_7138.known	chr1	+	2303	11	FSM	ENSG00000134690.11	ENST00000327331.2	2303	11	0	0	0	0	multi-exon	TRUE	canonical	3	195	junction_1	87.6296753388942	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAATCACTGTTCATCCT	37685215	True	NA	27	True	AATAAA	-21	NA	37692480	37709713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_37692579_37692675_37692785_37692904_37693034_37695909_37695951_37698904_37698978_37700435_37700522_37701753_37701819_37703251_37703348_37705440_37705568_37706977_37707065_37708321
transcript_71381.known	chr16	-	2083	11	FSM	ENSG00000162069.16	ENST00000642419.1	2083	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	46.410774611075	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAATGAAAAACACTCT	-3035233	True	NA	62	True	AAAAAG	-32	NA	3036926	3027711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3028274_3028347_3028469_3028699_3028831_3029279_3029430_3029544_3029740_3030448_3030596_3030695_3030813_3030934_3031151_3031409_3031509_3035214_3035527_3036893
transcript_71385.known	chr16	+	3674	10	FSM	ENSG00000008516.18	ENST00000336577.9	3674	10	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	6.68331255192114	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTCCATTCTTCTGAGC	3043675	True	NA	15	True	AATAAA	-17	NA	3046560	3060726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3047017_3047414_3047548_3050008_3050145_3050253_3050547_3057032_3057210_3057309_3057395_3057530_3057614_3058180_3058334_3058411_3058670_3058826
transcript_71390.known	chr16	-	2032	10	FSM	ENSG00000162069.16	ENST00000572449.6	2032	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_9	27.2274371422162	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCTGGGGGTGTCGTCA	-3035251	True	NA	92	True	AAAAAG	-28	NA	3036944	3027681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3028274_3028347_3028469_3028699_3028831_3029279_3029430_3029544_3029740_3030448_3030596_3030695_3030813_3030934_3031151_3035214_3035527_3036893
transcript_7140.known	chr1	+	2371	10	FSM	ENSG00000134690.11	ENST00000373055.6	2371	10	0	0	0	0	multi-exon	FALSE	canonical	3	430	junction_4	29.8332816055831	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGTTCATCCTGCCTGT	37685250	True	NA	33	True	AATAAA	-27	NA	37692515	37709719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_37692785_37692904_37693034_37695909_37695951_37698904_37698978_37700435_37700522_37701753_37701819_37703251_37703348_37705440_37705568_37706977_37707065_37708321
transcript_71418.known	chr16	-	495	5	FSM	ENSG00000103145.11	ENST00000573842.1	495	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_4	227.003854592824	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCCCAGTCCCCCCTACC	-3024268	False	NA	NA	False	NA	NA	NA	3024286	3022917	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3022999_3023232_3023362_3023473_3023531_3023846_3023969_3024180
transcript_71422.known	chr16	-	656	4	FSM	ENSG00000103145.11	ENST00000248089.8	656	4	0	0	0	0	multi-exon	FALSE	canonical	3	380	junction_3	151.836169018525	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTCAGTCTGGAACCTGG	-3020013	True	NA	-6	True	AATAAA	-19	NA	3023942	3022624	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3022999_3023232_3023362_3023473_3023531_3023846
transcript_71426.known	chr16	-	794	4	FSM	ENSG00000261971.9	ENST00000572574.5	794	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	5.90668171555645	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGCATCTCCCCATGCT	NA	False	NA	NA	False	NA	NA	NA	3059370	3054986	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3055033_3055735_3055946_3058539_3058703_3058995
transcript_71428.known	chr16	-	618	3	FSM	ENSG00000103145.11	ENST00000574151.5	618	3	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_2	261.5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTCAGTCTGGAACCTGG	-3020032	True	NA	-6	True	AATAAA	-19	NA	3023961	3022624	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3022999_3023232_3023362_3023846
transcript_71431.known	chr16	-	1199	3	FSM	ENSG00000103145.11	ENST00000576921.1	1199	3	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	319	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTCAGTCTGGAACCTGG	-3024057	True	NA	-6	True	AATAAA	-19	NA	3024269	3022624	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3022999_3023232_3023969_3024180
transcript_71433.known	chr16	-	560	2	FSM	ENSG00000261971.9	ENST00000572427.1	560	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCCCTCCAGCTGCCGGT	-3058818	True	NA	NA	False	NA	NA	NA	3059308	3058455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3058703_3058995
transcript_71434.known	chr16	-	1365	2	FSM	ENSG00000103145.11	ENST00000575214.1	1365	2	0	0	0	0	multi-exon	FALSE	canonical	3	732	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAAGAAGAACTGAATAAA	-3024243	False	NA	-44	True	NA	NA	NA	3024261	3022662	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3022999_3023232
transcript_71435.known	chr16	-	610	4	FSM	ENSG00000103145.11	ENST00000572355.5	610	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	299.395316522412	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGCTTCAGTCTGGAAC	-3024216	False	NA	-10	True	AATAAA	-15	NA	3024234	3022628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3022999_3023232_3023362_3023473_3023531_3024180
transcript_71436.known	chr16	-	1811	9	FSM	ENSG00000162069.16	ENST00000389347.4	1811	9	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_8	16.959049943909	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTATCTTTTCTAGGGCA	-3033848	False	NA	-19	True	AATATA	-1	NA	3035541	3027866	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3028274_3028347_3028469_3028699_3028831_3029279_3029430_3029544_3029740_3030448_3030596_3030695_3030813_3030934_3031151_3035214
transcript_71437.known	chr16	+	818	7	FSM	ENSG00000008517.19	ENST00000525643.7	818	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	4.14996653266291	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCAGGGGAGATACCATG	3065490	True	NA	2	True	AATAAA	-17	NA	3065639	3069530	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3065688_3065783_3065827_3067376_3067416_3067553_3067614_3067983_3068011_3068179_3068240_3068989
transcript_71438.known	chr16	+	1056	6	FSM	ENSG00000008517.19	ENST00000008180.13	1056	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	6.27375485654325	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAGATGGAGTTTCGCT	3065481	True	NA	NA	False	NA	NA	NA	3065630	3069819	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3065688_3065783_3065827_3067376_3067416_3067983_3068011_3068179_3068240_3068989
transcript_71449.nnic	chr16	-	2871	7	NNC	ENSG00000130182.8	novel	2716	6	NA	NA	-90	0	at_least_one_novel_splicesite	FALSE	canonical	3	81	junction_1	217.02304025149	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCCCTCTTTATTTCTTT	-3099342	False	NA	-31	True	ATTAAA	-31	NA	3099385	3088889	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_3090647_3091228_3091293_3091539_3091598_3091763_3091829_3092048_3092317_3092541_3093005_3099189
transcript_71456.nic	chr16	-	2863	7	NIC	ENSG00000130182.8	novel	2716	6	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_6	268.340993679477	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCCCTCTTTATTTCTTT	-3086824	True	NA	-31	True	ATTAAA	-31	NA	3099350	3088889	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_3090647_3091539_3091598_3091763_3091829_3092048_3092317_3092541_3093005_3093267_3093359_3099189
transcript_71477.known	chr16	-	2716	6	FSM	ENSG00000130182.8	ENST00000576985.6	2716	6	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_4	176.978642779291	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCCCTCTTTATTTCTTT	-3086768	True	NA	-31	True	ATTAAA	-31	NA	3099294	3088889	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3090647_3091539_3091598_3091763_3091829_3092048_3092317_3092541_3093005_3099189
transcript_71490.known	chr16	-	2247	5	FSM	ENSG00000130182.8	ENST00000575108.5	2247	5	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_4	287.746741945065	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGCCCCTCTTTATTT	-3086766	True	NA	-35	True	ATTAAA	-27	NA	3099292	3088893	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3090647_3091539_3091598_3091763_3091829_3092048_3092317_3099189
transcript_71493.known	chr16	-	2350	5	FSM	ENSG00000130182.8	ENST00000538082.5	2350	5	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_3	231.712645317428	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCCACTTTCACAGCTG	-3086769	True	NA	-130	True	NA	NA	NA	3099295	3088988	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3090647_3091539_3091598_3091763_3091829_3092541_3093005_3099189
transcript_71505.known	chr16	-	575	4	FSM	ENSG00000130182.8	ENST00000572431.1	575	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	313.756097771643	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGGCCGCACGCCTGCCA	-3086702	True	NA	NA	False	NA	NA	NA	3099228	3090233	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3090647_3091539_3091598_3091763_3091829_3099189
transcript_71507.nic	chr16	-	3252	4	NIC	ENSG00000130182.8	novel	2716	6	NA	NA	-90	0	intron_retention	FALSE	canonical	3	459	junction_3	114.825471428986	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCCCTCTTTATTTCTTT	-3099342	False	NA	-31	True	ATTAAA	-31	NA	3099385	3088889	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_3090647_3091539_3091598_3091763_3093005_3099189
transcript_71513.known	chr16	+	1006	7	FSM	ENSG00000122386.11	ENST00000414351.5	1006	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	20.8865985742054	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAAGCCCAACGAGGAGG	3111555	False	NA	NA	False	NA	NA	NA	3112794	3119496	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3112951_3113416_3113488_3115354_3115569_3115828_3115921_3116426_3116548_3118904_3119016_3119255
transcript_71515.known	chr16	+	1968	7	FSM	ENSG00000122386.11	ENST00000219091.9	1968	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	15.1152976226809	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCCCGCCTACACAGCTTT	3111346	True	NA	12	True	ATTAAA	-16	NA	3112585	3120517	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3112683_3113416_3113488_3115354_3115569_3115828_3115921_3116426_3116548_3118904_3119016_3119255
transcript_71517.known	chr16	+	2062	7	FSM	ENSG00000122386.11	ENST00000382192.7	2062	7	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	17.8457900419741	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCCCGCCTACACAGCTTT	3111320	True	NA	12	True	ATTAAA	-16	NA	3112559	3120517	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3112683_3113348_3113488_3115354_3115569_3115828_3115921_3116426_3116548_3118904_3119016_3119255
transcript_71518.nnic	chr16	+	2175	7	NNC	ENSG00000122386.11	novel	1968	7	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.520661906384	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCCCGCCTACACAGCTTT	3111333	True	NA	12	True	ATTAAA	-16	NA	3112572	3120517	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_3112877_3113416_3113488_3115354_3115569_3115828_3115921_3116426_3116548_3118904_3119016_3119255
transcript_71519.known	chr16	+	2309	7	FSM	ENSG00000122386.11	ENST00000620094.4	2309	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	21.202725191719	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCGCCCGCCTACACAGCT	3111339	True	NA	10	True	ATTAAA	-14	NA	3112578	3120515	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3112951_3113348_3113488_3115354_3115569_3115828_3115921_3116426_3116548_3118904_3119016_3119255
transcript_71520.known	chr16	+	3245	6	FSM	ENSG00000085644.14	ENST00000576863.1	3245	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	11.5238882327103	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGGCTGTTCTGTTCT	3134732	True	NA	12	True	AATAAA	-13	NA	3135158	3142804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3135388_3137165_3137680_3138353_3138542_3138744_3138819_3138974_3139099_3140688
transcript_71521.known	chr16	+	3311	6	FSM	ENSG00000085644.14	ENST00000396878.8	3311	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	4.83321838943783	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGGCTGTTCTGTTCT	3134602	True	NA	12	True	AATAAA	-13	NA	3135028	3142804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3135388_3137165_3137680_3138417_3138542_3138744_3138819_3138974_3139099_3140688
transcript_71523.known	chr16	+	2240	6	FSM	ENSG00000085644.14	ENST00000576416.5	2240	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	12.7027556065603	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCGTGGAGGACTGGCCTT	3134706	True	NA	NA	False	NA	NA	NA	3135132	3141779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3135446_3137165_3137680_3138417_3138542_3138744_3138819_3138974_3139099_3140688
transcript_71531.known	chr16	-	1489	4	FSM	ENSG00000263072.9	ENST00000573447.2	1489	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	15.9652400197707	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATATATTAAATTTTCC	-3134213	True	NA	-33	True	NA	NA	NA	3134873	3128861	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3129654_3131746_3132104_3132849_3132946_3134629
transcript_71532.known	chr16	-	1592	3	FSM	ENSG00000263072.9	ENST00000571963.5	1592	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	0.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTAGGGTTCTCCAGAAA	-3134222	True	NA	NA	False	NA	NA	NA	3134882	3128671	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3129654_3131746_3132104_3134629
transcript_71534.known	chr16	-	634	2	FSM	ENSG00000263072.9	ENST00000575089.2	688	2	53	1	8	-1	multi-exon	FALSE	canonical	3	41	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCGGATTGCACTTTCTT	-3134167	True	NA	-12	True	CATAAA	-17	NA	3134827	3131667	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3132104_3134629
transcript_71535.known	chr16	+	302	3	FSM	ENSG00000263011.2	ENST00000570700.2	305	3	0	3	0	-3	multi-exon	FALSE	canonical	1	1	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGATGCTCAGACTTCA	3106685	True	NA	NA	False	AATAAA	-17	NA	3106763	3109576	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3106831_3108248_3108332_3109424
transcript_71536.known	chr16	-	3348	5	FSM	ENSG00000010539.12	ENST00000431561.7	3348	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	13.4721935853075	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATAGTTTTTGTTTCTTGC	-3234169	True	NA	-5	True	NA	NA	NA	3235167	3222344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3224614_3232420_3232548_3232832_3232922_3233505_3233837_3234635
transcript_71537.known	chr16	-	3008	5	FSM	ENSG00000010539.12	ENST00000414144.7	3008	5	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_4	16.1709616287962	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGCCTATTGGTCTTTT	-3234160	True	NA	-8	True	NA	NA	NA	3235158	3222324	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3224614_3232420_3232548_3232832_3232922_3233505_3233837_3234986
transcript_71538.known	chr16	-	2373	5	FSM	ENSG00000010539.12	ENST00000396870.8	2373	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	17.3637553541853	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCAGACTCTCATTTGT	-3234188	True	NA	-122	True	AATATA	-13	NA	3235186	3223335	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3224611_3232420_3232548_3232832_3232922_3233505_3233837_3234635
transcript_71539.known	chr16	-	1350	5	FSM	ENSG00000010539.12	ENST00000575948.1	1350	5	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_1	19.1180542943052	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGGAACCCTTTCTGGG	-3234072	True	NA	NA	False	NA	NA	NA	3235070	3223891	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3224611_3232420_3232548_3232832_3232922_3233505_3233837_3234986
transcript_71546.known	chr16	+	2859	7	FSM	ENSG00000162086.16	ENST00000669516.2	2859	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	16.0043396892496	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAGTGTTGGGCGAGGAT	3303625	True	NA	NA	False	AATAAA	-17	NA	3305496	3318851	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3305644_3308312_3308837_3311752_3311949_3312676_3312769_3313048_3313176_3316911_3317023_3317189
transcript_71547.known	chr16	+	3282	6	FSM	ENSG00000006194.10	ENST00000219069.6	3282	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	21.7770521421059	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTGAGTCTTCAATGA	3281547	True	NA	NA	False	AATAAA	-20	NA	3283490	3291460	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3284206_3285058_3285240_3285680_3285755_3286022_3286150_3288453_3288571_3289392
transcript_71548.nnic	chr16	+	3321	6	NNC	ENSG00000006194.10	novel	3282	6	NA	NA	-72	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	31.2499599999744	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTGAGTCTTCAATGA	3281469	True	NA	NA	False	AATAAA	-20	NA	3283412	3291460	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_3284206_3285058_3285240_3285719_3285755_3286022_3286150_3288453_3288571_3289392
transcript_71551.known	chr16	+	2546	6	FSM	ENSG00000162086.16	ENST00000498240.6	2546	6	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_4	23.6474100061719	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCTGCCTTGCAATGTC	NA	False	NA	3	True	AATAAA	-17	NA	3305405	3318574	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3305644_3308312_3308837_3311752_3311949_3312676_3312769_3316911_3317023_3317189
transcript_71553.nnic	chr16	+	3274	5	NIC	ENSG00000006194.10	novel	3282	6	NA	NA	-103	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_4	17.2481883106603	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTGAGTCTTCAATGA	3281438	True	NA	NA	False	AATAAA	-20	NA	3283381	3291460	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_3284206_3285058_3285240_3285680_3285755_3286022_3286150_3289392
transcript_71559.nic	chr16	+	3148	5	NIC	ENSG00000006194.10	novel	3282	6	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	35.2065334845679	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTGAGTCTTCAATGA	3281500	True	NA	NA	False	AATAAA	-20	NA	3283443	3291460	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_3284206_3285680_3285755_3286022_3286150_3288453_3288571_3289392
transcript_7156.known	chr1	-	1848	5	FSM	ENSG00000196449.4	ENST00000373044.3	1848	5	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_2	27.6857363998143	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTTCTTCTTTTGAA	-37803193	True	NA	-3	True	ATTAAA	-16	NA	37808208	37802944	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_37803998_37804301_37804445_37806856_37806977_37807100_37807216_37807791
transcript_71560.known	chr16	+	598	5	FSM	ENSG00000162086.16	ENST00000571101.5	598	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	30.019785142469	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATCAGCAGGCGTCATA	3303636	True	NA	NA	False	NA	NA	NA	3305507	3317252	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3305644_3311752_3311949_3312676_3312769_3316911_3317023_3317189
transcript_71564.nic	chr16	+	3139	4	NIC	ENSG00000006194.10	novel	3282	6	NA	NA	-106	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	34.6538437823121	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTGAGTCTTCAATGA	3281435	True	NA	NA	False	AATAAA	-20	NA	3283378	3291460	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_3284206_3286022_3286150_3288453_3288571_3289392
transcript_71570.known	chr16	+	851	3	FSM	ENSG00000006194.10	ENST00000575823.1	851	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	36	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGTGAGAAGCCCTATCAG	3282011	False	NA	NA	False	NA	NA	NA	3283954	3289875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3284206_3288453_3288571_3289392
transcript_71572.known	chr16	+	1139	2	FSM	ENSG00000006194.10	ENST00000574253.1	1139	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCAGAACACCCATCTGAC	3281566	True	NA	NA	False	NA	NA	NA	3283509	3289835	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3284206_3289392
transcript_71573.nic	chr16	+	1339	2	ISM	ENSG00000162086.16	ENST00000498240.6	2546	6	72	9089	-6	13	5prime_fragment	FALSE	canonical	3	75	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGCCGGGTGCAGTGACTC	3303606	True	NA	NA	False	AAAACA	-19	NA	3305477	3309485	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_3305644_3308312
transcript_71574.known	chr16	-	3421	2	FSM	ENSG00000140993.11	ENST00000396862.2	3421	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATTTGTGTTTCATAA	-3304617	True	NA	0	True	TATAAA	-44	NA	3305430	3298807	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3302010_3305211
transcript_71576.nnic	chr16	-	3011	7	NNC	ENSG00000140987.21	novel	3108	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_6	15.7559512565887	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGGCCTTTGGTTGT	-3399464	True	NA	-4	True	AATAAA	-17	NA	3401004	3382084	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_3383712_3384458_3384942_3390009_3390134_3390422_3390518_3393648_3393815_3397191_3397648_3400944
transcript_71577.known	chr16	-	3108	7	FSM	ENSG00000140987.21	ENST00000396852.9	3108	7	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	6.82316316348624	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGGCCTTTGGTTGT	-3399464	True	NA	-4	True	AATAAA	-17	NA	3401004	3382084	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3383712_3384458_3384942_3390009_3390134_3390422_3390518_3393648_3393815_3397191_3397745_3400944
transcript_71579.nic	chr16	-	3175	7	NIC	ENSG00000140987.21	novel	3108	7	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_3	17.3917285576283	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGGCCTTTGGTTGT	-3399481	True	NA	-4	True	AATAAA	-17	NA	3401021	3382084	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_3383712_3384458_3384942_3390009_3390184_3390422_3390518_3393648_3393815_3397191_3397745_3400944
transcript_71585.nic	chr16	-	3872	6	NIC	ENSG00000140987.21	novel	3108	7	NA	NA	4	0	intron_retention	FALSE	canonical	3	45	junction_3	7.00285656000464	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGGCCTTTGGTTGT	-3399481	True	NA	-4	True	AATAAA	-17	NA	3401021	3382084	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_3384942_3390009_3390134_3390422_3390518_3393648_3393815_3397191_3397745_3400944
transcript_71588.nic	chr16	-	2906	5	NIC	ENSG00000140987.21	novel	3108	7	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	21.540659228538	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGGCCTTTGGTTGT	-3399481	True	NA	-4	True	AATAAA	-17	NA	3401021	3382084	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_3383712_3384458_3384942_3393648_3393815_3397191_3397745_3400944
transcript_7159.known	chr1	+	1234	3	FSM	ENSG00000197982.14	ENST00000468084.1	1234	3	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_1	167.5	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCTGGTGACCGACGTT	37803781	True	NA	24	True	ATTAAA	-15	NA	37807746	37809449	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_37808307_37808530_37808733_37808977
transcript_71590.known	chr16	-	906	5	FSM	ENSG00000140987.21	ENST00000571906.1	906	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	21.1586270821148	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTACAGGGCCATGGCG	-3399436	True	NA	NA	False	NA	NA	NA	3400976	3384839	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3384942_3390009_3390134_3390422_3390518_3397191_3397745_3400944
transcript_71591.known	chr16	-	2441	4	FSM	ENSG00000140987.21	ENST00000576500.5	2441	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	20.8486610281492	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGCAAACAGAAAGAAG	-3399455	True	NA	NA	False	NA	NA	NA	3400995	3382357	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3383712_3384458_3384942_3397191_3397745_3400944
transcript_71594.known	chr16	-	1746	3	FSM	ENSG00000140987.21	ENST00000439568.2	1746	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	24	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTCTCCTTTCCTGGAA	-3399454	True	NA	NA	False	NA	NA	NA	3400994	3382498	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3383712_3384458_3384942_3400944
transcript_71595.nic	chr16	-	3487	3	NIC	ENSG00000140987.21	novel	3108	7	NA	NA	4	0	intron_retention	FALSE	canonical	3	14	junction_1	25	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGGCCTTTGGTTGT	-3399481	True	NA	-4	True	AATAAA	-17	NA	3401021	3382084	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_3384942_3397191_3397745_3400944
transcript_71596.known	chr16	-	3027	6	FSM	ENSG00000140987.21	ENST00000304926.7	3027	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	23.3632189562997	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGGCCTTTGGTTGT	-3399485	True	NA	-4	True	AATAAA	-17	NA	3401025	3382084	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3383712_3384458_3384942_3390009_3390184_3390422_3390518_3397191_3397788_3400973
transcript_71597.known	chr16	+	1068	4	FSM	ENSG00000103343.13	ENST00000575752.5	1068	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	33.9934634239519	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTTGTCCTCCTCTGTG	3399105	True	NA	10	True	AATAAA	-19	NA	3401234	3405043	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3401271_3401732_3402407_3404425_3404649_3404908
transcript_7160.known	chr1	+	1329	3	FSM	ENSG00000197982.14	ENST00000373042.5	1329	3	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	240.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGACCGACGTTTCCTT	37803824	True	NA	29	True	ATTAAA	-20	NA	37807789	37809454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_37808440_37808530_37808733_37808977
transcript_71600.known	chr16	+	1586	4	FSM	ENSG00000103343.13	ENST00000571936.5	1586	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	33.4165627596057	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTACTTGCATGTAAATCA	3399105	True	NA	NA	False	NA	NA	NA	3401234	3408973	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3401271_3401732_3402407_3404425_3404649_3408320
transcript_71601.known	chr16	+	1557	3	FSM	ENSG00000103343.13	ENST00000344823.9	1557	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	30	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCCTCAAATCTATTTCC	3399114	True	NA	46	True	NA	NA	NA	3401243	3405079	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3402407_3404425_3404649_3404908
transcript_71604.known	chr16	+	2459	3	FSM	ENSG00000103343.13	ENST00000268655.5	2459	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	12.5	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAAGGCAAAGTTAATTG	3399085	True	NA	17	True	AATAAA	-20	NA	3401214	3409364	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3402407_3404425_3404649_3408320
transcript_71605.known	chr16	+	1002	2	FSM	ENSG00000103343.13	ENST00000572544.1	1002	2	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTTTAGAGGGGCCTG	3399844	False	NA	-39	True	NA	NA	NA	3401973	3404994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3402407_3404425
transcript_71607.known	chr16	-	5483	4	FSM	ENSG00000167981.7	ENST00000301744.7	5483	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	4.32049379893857	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGTGAACTTTTTAAAAA	-3443188	True	NA	NA	False	ATTAAA	-23	NA	3443504	3432413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3437539_3440806_3440934_3443120_3443207_3443359
transcript_71611.known	chr16	+	4083	12	FSM	ENSG00000103351.13	ENST00000576634.6	4083	12	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	12.5362284915914	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATTGGTAGTAGTTAT	3500272	True	NA	NA	False	AATACA	-23	NA	3501003	3539048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3501090_3504719_3504832_3506330_3506416_3508288_3508469_3512382_3512479_3515507_3515592_3519902_3520037_3523157_3523300_3526411_3526485_3530567_3530676_3532785_3532842_3536121
transcript_7162.known	chr1	-	7937	11	FSM	ENSG00000188786.10	ENST00000373036.5	7937	11	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	2.4576411454889	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTAGTATCTGTGGCAT	-37858552	True	NA	-6	True	ATTAAA	-35	NA	37859592	37809573	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_37815567_37817418_37817483_37822120_37822717_37823709_37823813_37832244_37832323_37835078_37835216_37835670_37835745_37838624_37838757_37839919_37840159_37857250_37857710_37859530
transcript_71620.nic	chr16	+	2676	8	NIC	ENSG00000122390.19	novel	2656	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	27	junction_2	112.344768186042	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCGTCACATCCTGTTTCC	3442900	True	NA	20	True	AATAAA	-16	NA	3443649	3486953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_3443828_3448470_3448541_3476221_3476338_3479470_3479601_3482501_3482599_3483362_3483598_3484698_3485062_3485466
transcript_71623.known	chr16	+	2656	8	FSM	ENSG00000122390.19	ENST00000407558.9	2656	8	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	114.607938607396	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCGTCACATCCTGTTTCC	3442930	True	NA	20	True	AATAAA	-16	NA	3443679	3486953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3443838_3448470_3448541_3476221_3476338_3479470_3479601_3482501_3482599_3483362_3483598_3484698_3485062_3485466
transcript_71626.known	chr16	+	1950	7	FSM	ENSG00000122390.19	ENST00000572169.6	1950	7	0	0	0	0	multi-exon	FALSE	canonical	2	27	junction_2	121.314558987049	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCCTGGCACAGGCGGT	3442956	True	NA	NA	False	NA	NA	NA	3443705	3485878	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3443828_3448470_3448541_3476221_3476338_3479470_3479601_3482501_3482599_3483362_3483598_3484698
transcript_71632.known	chr16	+	2531	7	FSM	ENSG00000122390.19	ENST00000575076.5	2531	7	0	0	0	0	multi-exon	FALSE	canonical	2	169	junction_5	53.8072692321606	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCGTCACATCCTGTTTC	3454105	True	NA	19	True	AATAAA	-15	NA	3458077	3486952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3483362_3483598_3484698_3485062_3485466
transcript_71633.known	chr16	+	2619	7	FSM	ENSG00000122390.19	ENST00000414063.6	2619	7	0	0	0	0	multi-exon	FALSE	canonical	2	90	junction_6	79.6061485620859	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCGTCACATCCTGTTTC	3454039	True	NA	19	True	AATAAA	-15	NA	3458011	3486952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3483362_3483598_3484698_3485084_3485466
transcript_71635.nic	chr16	+	776	7	ISM	ENSG00000103351.13	ENST00000341633.9	1643	13	-57	16573	-21	-3210	5prime_fragment	FALSE	canonical	3	61	junction_1	7.41057802513857	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGAACTGGAAAGAAATCG	3500223	True	NA	NA	False	NA	NA	NA	3500954	3519986	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_3501090_3504719_3504832_3506330_3506416_3508288_3508469_3512382_3512479_3515507_3515592_3519902
transcript_71642.known	chr16	+	2931	6	FSM	ENSG00000122390.19	ENST00000572584.2	2931	6	0	0	0	0	multi-exon	FALSE	canonical	2	169	junction_5	51.8204592800952	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTCTCATTACGAGCAAA	3454072	True	NA	-19	True	NA	NA	NA	3458044	3486914	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3483362_3483598_3484698
transcript_71643.nic	chr16	+	3723	6	NIC	ENSG00000122390.19	novel	2531	7	NA	NA	3	0	intron_retention	TRUE	canonical	3	193	junction_5	43.4354693769965	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCGTCACATCCTGTTTCC	3454015	True	NA	20	True	AATAAA	-16	NA	3457987	3486953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3483362_3485062_3485466
transcript_71646.nic	chr16	+	2395	6	NIC	ENSG00000122390.19	novel	833	6	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	108.206099643227	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCGTCACATCCTGTTTCC	3454015	True	NA	20	True	AATAAA	-16	NA	3457987	3486953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3484690_3485062_3485466
transcript_71647.known	chr16	+	833	6	FSM	ENSG00000122390.19	ENST00000570819.5	833	6	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	103.698408859538	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCCGCTGCCTGTTCTTG	3454157	True	NA	NA	False	NA	NA	NA	3458129	3485604	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3484761_3485062_3485466
transcript_71648.known	chr16	+	1089	6	FSM	ENSG00000122390.19	ENST00000572942.5	1089	6	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	113.994034931658	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGAGTGGCCCCCACTC	3454105	True	NA	NA	False	NA	NA	NA	3458077	3485786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3484761_3485084_3485466
transcript_71652.nic	chr16	+	2482	6	NIC	ENSG00000122390.19	novel	2619	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	26	junction_1	105.163872123463	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCGTCACATCCTGTTTCC	3454039	True	NA	20	True	AATAAA	-16	NA	3458011	3486953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_3458182_3479470_3479601_3482501_3482599_3483362_3483598_3484698_3485062_3485466
transcript_71653.known	chr16	+	2522	6	FSM	ENSG00000122390.19	ENST00000360862.9	2522	6	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_1	114.468161512274	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCGTCACATCCTGTTTC	3454020	True	NA	19	True	AATAAA	-15	NA	3457992	3486952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3458182_3479470_3479601_3482501_3482599_3483362_3483598_3484698_3485084_3485466
transcript_71655.known	chr16	+	3899	5	FSM	ENSG00000122390.19	ENST00000648681.1	3899	5	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_1	25.7972866790289	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCCCACCCTGCCCCAC	3454132	True	NA	-92	True	NA	NA	NA	3458104	3486841	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3483362
transcript_71660.known	chr16	+	1124	5	FSM	ENSG00000122390.19	ENST00000577013.6	1124	5	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_1	117.482977490358	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACCAGCACAGCCCAGAGG	3454039	True	NA	NA	False	NA	NA	NA	3458011	3485190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3458182_3479470_3479601_3482501_3482599_3483362_3483598_3484698
transcript_71665.known	chr16	+	326	3	FSM	ENSG00000122390.19	ENST00000615865.1	326	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	7	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGATAATTCACTGTCC	3442984	True	NA	NA	False	AATAAA	-17	NA	3443733	3450165	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_3443828_3448470_3448541_3450003
transcript_71668.known	chr16	-	7315	15	FSM	ENSG00000188827.11	ENST00000294008.4	7315	15	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_14	8.1928291193941	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTGCCACACTCCAGG	-3610356	True	NA	-14	True	AATAAA	-21	NA	3611606	3581180	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3582694_3583096_3583511_3584768_3584872_3589001_3591311_3592698_3592866_3594452_3594600_3595604_3595694_3596152_3596394_3597378_3597696_3597796_3598000_3600978_3601192_3602117_3602308_3606473_3606699_3608429_3609567_3611559
transcript_7168.known	chr1	-	3905	18	FSM	ENSG00000204084.13	ENST00000373027.5	3905	18	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_10	18.6070269867918	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTTGTGTATGTTTTTAT	-37928996	True	NA	-2	True	GATAAA	-17	NA	37931749	37860696	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_37862431_37864311_37864424_37865760_37865889_37866458_37866544_37868500_37868615_37872929_37873166_37873992_37874156_37875605_37875717_37878187_37878324_37880084_37880195_37882806_37882919_37885637_37885826_37886887_37887005_37887350_37887466_37888242_37888345_37889556_37889725_37891357_37891455_37931672
transcript_71689.known	chr16	-	2223	18	FSM	ENSG00000126602.11	ENST00000246957.10	2223	18	0	0	0	0	multi-exon	FALSE	canonical	3	1682	junction_11	127.485123631759	6284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTTGGGCTTTTTTT	-3692692	True	NA	-2	True	TTTAAA	-18	NA	3717524	3658036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3658231_3658792_3658866_3661986_3662133_3662881_3662968_3663423_3663563_3664273_3664460_3665970_3666119_3671721_3671792_3672699_3672821_3674338_3674495_3675323_3675398_3676035_3676146_3677497_3677659_3679718_3679791_3685995_3686137_3689054_3689138_3690826_3690986_3717420
transcript_71711.known	chr16	-	2052	17	FSM	ENSG00000126602.11	ENST00000538171.5	2052	17	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_16	477.941942080835	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGTGTTGGGCTTTTTT	-3692681	True	NA	-3	True	TTTAAA	-17	NA	3717513	3658037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3658231_3658792_3658866_3661986_3662133_3662881_3662968_3663423_3663563_3664273_3664460_3665970_3666119_3671721_3671792_3672699_3672821_3674338_3674495_3675323_3675398_3676035_3676146_3677497_3677659_3679718_3679791_3685995_3686137_3689054_3689138_3717420
transcript_7175.known	chr1	-	2774	17	FSM	ENSG00000183431.12	ENST00000373019.5	2774	17	0	0	0	0	multi-exon	FALSE	canonical	3	1391	junction_7	131.475981052624	583	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAATCTTTTTCTTTATA	-37968512	True	NA	-14	True	AATAAA	-18	NA	37990022	37956974	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_37958264_37960119_37960176_37968043_37968135_37969353_37969465_37969570_37969736_37976883_37976954_37978719_37978828_37978987_37979056_37979464_37979534_37980585_37980725_37981728_37981812_37984168_37984261_37984706_37984780_37987572_37987679_37987783_37987837_37989547_37989596_37989869
transcript_7177.known	chr1	-	1656	6	FSM	ENSG00000183386.10	ENST00000373016.4	1656	6	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_5	30.7571129984594	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGGGCCTCCGTGTGTGT	-38003626	True	NA	-9	True	AATAAA	-14	NA	38005514	37996769	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_37997560_37997683_37997871_37997962_37998133_37998973_37999149_37999256_37999433_38005356
transcript_71778.known	chr16	-	10790	31	FSM	ENSG00000005339.15	ENST00000262367.10	10790	31	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_6	11.0330815681245	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGTTCAGATTGGCTAAT	-3879593	True	NA	-27	True	AATAAA	-27	NA	3880713	3725053	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3729875_3731191_3731474_3731775_3731938_3736035_3736204_3736649_3736816_3738558_3738673_3739577_3739725_3740398_3740550_3744893_3744962_3745276_3745355_3749626_3749684_3751725_3751807_3757287_3757377_3757808_3758049_3758853_3758973_3767719_3767910_3769173_3769354_3770569_3770987_3773750_3773931_3774568_3774694_3777612_3777658_3778010_3778183_3778699_3778818_3780731_3780879_3781203_3781307_3782683_3782927_3791980_3792095_3793385_3793627_3810602_3810780_3850296_3851010_3879831
transcript_71779.known	chr16	-	7980	11	FSM	ENSG00000162104.10	ENST00000294016.8	7980	11	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	9.7821265581672	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGATGCCTGGTGTTTT	-4116059	True	NA	NA	False	ATTAAA	-18	NA	4116442	3962652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_3966967_3974668_3974711_3977481_3977631_3979115_3979276_3983231_3983441_3988993_3989097_3992145_3992364_3993405_3993511_4007367_4007559_4113749_4115486_4115689
transcript_7178.known	chr1	-	1091	6	FSM	ENSG00000183386.10	ENST00000477194.5	1091	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_5	44.9826633271086	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCACCTCTGGGACTCA	-38005596	False	NA	NA	False	NA	NA	NA	38005606	37997344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_37997560_37997683_37997871_37997962_37998133_37998973_37999149_37999256_37999433_38005438
transcript_71781.known	chr16	-	318	2	FSM	ENSG00000263105.1	ENST00000573220.1	318	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTGTCAGGCATGTCCA	-4183364	False	NA	NA	False	CATAAA	-27	NA	4183515	4180116	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4180312_4183392
transcript_71786.known	chr16	-	2163	7	FSM	ENSG00000090447.12	ENST00000204517.11	2163	7	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	7.03364928200306	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGAGTCTCCTGGGTG	-4270299	True	NA	-4	True	AATAAA	-20	NA	4273023	4257185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4258250_4260089_4260246_4260454_4260596_4261778_4261950_4262323_4262423_4262535_4262702_4272657
transcript_71789.known	chr16	-	3284	31	FSM	ENSG00000103426.12	ENST00000572467.5	3284	31	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	172.959481446442	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCGTTTGCATGTGTCC	-4415710	True	NA	-6	True	AATAAA	-14	NA	4416587	4340250	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4340406_4340919_4340986_4341367_4341505_4343206_4343292_4355285_4355373_4357167_4357260_4357967_4358104_4358366_4358484_4359295_4359386_4359479_4359622_4360277_4360364_4360443_4360549_4360942_4361086_4361161_4361249_4361360_4361470_4361984_4362161_4362611_4362739_4364275_4364414_4364596_4364690_4364774_4364921_4365002_4365061_4365490_4365546_4387985_4388069_4388544_4388632_4395288_4395340_4405490_4405568_4407500_4407685_4408180_4408252_4412355_4412431_4413307_4413405_4416458
transcript_7179.known	chr1	-	1468	5	FSM	ENSG00000183386.10	ENST00000485803.5	1468	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	75.8926050415981	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGGGCCTCCGTGTGTGT	-38003614	True	NA	-9	True	AATAAA	-14	NA	38005502	37996769	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_37997560_37997683_37997871_37997962_37998133_37998973_37999149_38005356
transcript_71795.known	chr16	-	3472	28	FSM	ENSG00000262246.6	ENST00000251166.9	3472	28	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_19	16.8420402857746	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTGTGCTGCTGTGGTC	-4415719	True	NA	-1	True	ATTAAA	-18	NA	4416596	4354541	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4355164_4355285_4355373_4357167_4357260_4357967_4358104_4358366_4358484_4359295_4359386_4359479_4359622_4360277_4360364_4360443_4360549_4360942_4361086_4361161_4361249_4361360_4361470_4361984_4362161_4362611_4362739_4364275_4364414_4364596_4364690_4364774_4364921_4365002_4365061_4365490_4365546_4387985_4388069_4388544_4388632_4395288_4395340_4405490_4405568_4407500_4407685_4408180_4408252_4412355_4412431_4413307_4413405_4416458
transcript_7180.known	chr1	-	882	4	FSM	ENSG00000183386.10	ENST00000475084.5	882	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	80.6267118681313	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACACCTGGACTCCAGAAT	-38003614	True	NA	NA	False	NA	NA	NA	38005502	37997185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_37997560_37997683_37997871_37998973_37999149_38005356
transcript_71806.nic	chr16	-	3700	27	ISM	ENSG00000103426.12	ENST00000572467.5	3284	31	-117	14293	-117	-13603	5prime_fragment	FALSE	canonical	3	119	junction_18	17.1571228329614	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTCTTGTGCTGCTGTGG	NA	False	NA	-3	True	ATTAAA	-16	NA	4416704	4354543	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_4355373_4357167_4357260_4357967_4358104_4358366_4358484_4359295_4359386_4359479_4359622_4360277_4360364_4360443_4360549_4360942_4361086_4361161_4361249_4361360_4361470_4361984_4362161_4362611_4362739_4364275_4364414_4364596_4364690_4364774_4364921_4365002_4365061_4365490_4365546_4387985_4388069_4388544_4388632_4395288_4395340_4405490_4405568_4407500_4407685_4408180_4408252_4412355_4412431_4413307_4413405_4416458
transcript_71808.known	chr16	-	2826	26	FSM	ENSG00000262246.6	ENST00000574025.5	2826	26	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_23	32.3876519679955	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTCAGCTGCTGCTCATC	NA	False	NA	NA	False	NA	NA	NA	4416627	4354963	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4355164_4355285_4355373_4357167_4357260_4357967_4358104_4358366_4358484_4359295_4359386_4359479_4359622_4360277_4360364_4360443_4360549_4360942_4361086_4361161_4361249_4361360_4361470_4361984_4362161_4362611_4362739_4364275_4364414_4364596_4364690_4364774_4364921_4365002_4365061_4365490_4365546_4387985_4388069_4388544_4388632_4395288_4395340_4405490_4405568_4412355_4412431_4413307_4413405_4416458
transcript_71814.nnic	chr16	-	2747	24	NNC	ENSG00000262246.6	novel	1737	17	NA	NA	-75	1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	32.7767264933814	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAATTTATCCAATTTTA	NA	False	NA	-4	True	AATAAA	-20	NA	4416704	4358848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_4359070_4359295_4359386_4359479_4359622_4360277_4360364_4360443_4360549_4360942_4361086_4361161_4361249_4361360_4361470_4361984_4362161_4362611_4362739_4364275_4364414_4364596_4364690_4364774_4364921_4365002_4365061_4365490_4365546_4387985_4388069_4388544_4388632_4395288_4395340_4405490_4405568_4407500_4407685_4408180_4408252_4412355_4412431_4413307_4413405_4416458
transcript_7182.known	chr1	+	2023	8	FSM	ENSG00000183520.12	ENST00000373014.5	2023	8	0	0	0	0	multi-exon	FALSE	canonical	3	819	junction_4	58.1567200040774	262	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCATAGTGTTTTATCTAG	38003657	True	NA	20	True	AATAAA	-16	NA	38012733	38024820	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_38012866_38016358_38016421_38017667_38017771_38018463_38018578_38019058_38019153_38019252_38019384_38022698_38022810_38023544
transcript_71827.known	chr16	+	3900	7	FSM	ENSG00000126603.9	ENST00000433375.2	3900	7	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_1	3.65148371670111	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGTATGTCGTGGATG	NA	False	NA	15	True	AATAAA	-16	NA	4316066	4339595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_4316255_4332214_4332453_4333346_4333520_4334800_4334978_4335059_4335194_4335274_4335394_4336724
transcript_71841.known	chr16	-	548	5	FSM	ENSG00000217930.8	ENST00000577031.5	548	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	276.714089811126	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTAAAGACACATACGCAG	-4342217	True	NA	NA	False	NA	NA	NA	4351265	4331548	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4331775_4340919_4340986_4341367_4341505_4343206_4343292_4351231
transcript_71843.known	chr16	-	533	5	FSM	ENSG00000217930.8	ENST00000318059.8	533	5	0	0	0	0	multi-exon	FALSE	canonical	3	468	junction_4	112.247494404107	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCGTTTGCATGTGTCC	-4342273	True	NA	-6	True	AATAAA	-14	NA	4351321	4340250	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4340406_4340919_4340986_4341367_4341505_4343206_4343292_4351231
transcript_71844.known	chr16	-	606	5	FSM	ENSG00000217930.8	ENST00000571986.5	606	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	298.033869719534	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCGTTTGCATGTGTCC	-4342267	True	NA	-6	True	AATAAA	-14	NA	4351315	4340250	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4340406_4340919_4340986_4341367_4341584_4343206_4343292_4351231
transcript_71845.known	chr16	-	650	5	FSM	ENSG00000217930.8	ENST00000573614.5	650	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	281.665138062913	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCGTTTGCATGTGTCC	-4342222	True	NA	-6	True	AATAAA	-14	NA	4351270	4340250	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4340406_4340919_4340986_4341367_4341673_4343206_4343292_4351231
transcript_71846.known	chr16	-	353	4	FSM	ENSG00000217930.8	ENST00000571178.1	353	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	345.309844761033	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCGGCTCCCCCCGCCCA	-4342245	True	NA	-73	True	AAAAAG	-22	NA	4351293	4340317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4340406_4340919_4340986_4341367_4341505_4351231
transcript_71850.known	chr16	+	2816	2	FSM	ENSG00000168140.5	ENST00000304735.4	2816	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCAGGGTAGAAGGGCTG	4370668	True	NA	15	True	AATAAA	-26	NA	4371847	4383538	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_4371994_4380868
transcript_71856.known	chr16	+	2700	12	FSM	ENSG00000103423.14	ENST00000262375.11	2700	12	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_11	175.315206093491	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTCATTTCTTCTTTG	NA	False	NA	17	True	AAAAAG	-17	NA	4425867	4456775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_4426093_4434383_4434518_4437401_4437486_4441374_4441576_4442267_4442421_4443016_4443165_4444663_4444729_4446885_4447015_4448732_4448849_4450399_4450498_4454810_4454928_4455545
transcript_71865.known	chr16	+	2591	11	FSM	ENSG00000103423.14	ENST00000355296.8	2591	11	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_1	54.0522894982257	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTCATTTCTTCTTTG	NA	False	NA	17	True	AAAAAG	-17	NA	4425859	4456775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_4426093_4434383_4434518_4437401_4437486_4441374_4441576_4442267_4442421_4443016_4443165_4444663_4444729_4446885_4447015_4448732_4448849_4450399_4450498_4455545
transcript_71878.known	chr16	+	403	3	FSM	ENSG00000103423.14	ENST00000573120.5	403	3	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_1	62.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAAAAAAGAGAT	4426003	True	NA	NA	False	NA	NA	NA	4426047	4437625	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_4426093_4434383_4434518_4437401
transcript_71885.known	chr16	+	1797	7	FSM	ENSG00000103415.12	ENST00000458134.7	1797	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	218.97260102579	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCGCGCTGTGTAAATGCT	4476327	False	NA	-39	True	NA	NA	NA	4476339	4510295	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_4476488_4483636_4483755_4505483_4505611_4506894_4507013_4507712_4508205_4509411_4509539_4509628
transcript_7189.known	chr1	+	573	5	FSM	ENSG00000224592.5	ENST00000428151.1	573	5	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_4	2.27760839478607	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTGGGCTTCAGAGCAC	38047412	False	NA	NA	False	NA	NA	NA	38047424	38119025	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_38047615_38102416_38102497_38103545_38103662_38105631_38105753_38118959
transcript_71893.nic	chr16	-	1383	7	NIC	ENSG00000153406.14	novel	1233	6	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_4	192.450354348567	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGCTTCCAGGAGAAGAG	-4471958	True	NA	-21	True	AATAAA	-16	NA	4474636	4461693	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_4461960_4463659_4463851_4466152_4466403_4469226_4469466_4471313_4471450_4474092_4474167_4474409
transcript_719.known	chr1	-	2428	2	FSM	ENSG00000127054.22	ENST00000496353.1	2428	2	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTATGTTTATCTTTTTTG	-1318688	True	NA	-34	True	NA	NA	NA	1324611	1318696	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1321094_1324580
transcript_71900.known	chr16	+	1727	6	FSM	ENSG00000103415.12	ENST00000406590.6	1727	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	193.229811364603	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCTTCCCTGCCTCCTG	NA	False	NA	12	True	AATAAA	-17	NA	4474702	4510346	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_4474848_4505483_4505611_4506894_4507013_4507712_4508205_4509411_4509539_4509628
transcript_71904.known	chr16	-	1240	6	FSM	ENSG00000153406.14	ENST00000574425.5	1240	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	160.327913976325	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGGCTTCCAGGAGAAGA	-4471965	True	NA	-22	True	AATAAA	-15	NA	4474643	4461694	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4461960_4463659_4463851_4466152_4466403_4469226_4469466_4474092_4474167_4474422
transcript_7191.known	chr1	-	2681	7	FSM	ENSG00000116954.8	ENST00000373001.4	2681	7	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_6	9.72967967955095	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCGTTTCTCCTTGCCTG	-38858483	True	NA	-2	True	AATAAA	-17	NA	38859772	38838197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_38839705_38845938_38846088_38851614_38851758_38852373_38852489_38855707_38855908_38856878_38857083_38859409
transcript_71914.known	chr16	+	1027	5	FSM	ENSG00000103415.12	ENST00000575120.5	1027	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	211.391816303281	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCAGGTGACTTTTTAAA	4475866	True	NA	-60	True	ACTAAA	-6	NA	4476405	4509836	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_4476488_4506894_4507013_4507712_4508205_4509411_4509539_4509628
transcript_71932.nic	chr16	-	1395	4	ISM	ENSG00000153406.14	ENST00000404295.7	1233	6	-14	3854	7	615	5prime_fragment	FALSE	canonical	3	292	junction_3	71.1243043316887	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAGACGAGGAGAGGATT	-4471958	True	NA	NA	False	AAAACA	-31	NA	4474636	4465547	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_4466403_4469226_4469466_4474092_4474167_4474409
transcript_71935.known	chr16	-	1092	6	FSM	ENSG00000153406.14	ENST00000283429.11	1092	6	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_5	137.31860762475	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGCTTCCAGGAGAAGAG	-4471947	True	NA	-21	True	AATAAA	-16	NA	4474625	4461693	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4461960_4463659_4463851_4466152_4466403_4469226_4469466_4474092_4474167_4474553
transcript_71936.known	chr16	+	1673	6	FSM	ENSG00000103415.12	ENST00000570646.6	1673	6	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_1	51.6975821484912	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTTCCCTGCCTCCTGG	4475858	True	NA	13	True	AATAAA	-18	NA	4476397	4510347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_4476488_4505483_4505611_4506894_4507013_4507712_4508205_4509411_4509539_4509628
transcript_7194.known	chr1	-	2532	5	FSM	ENSG00000214114.9	ENST00000397572.5	2532	5	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_2	21.4184499906039	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCCTTGCAAACTGTAAAG	-38868844	True	NA	NA	False	ATTAAA	-17	NA	38873348	38862492	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_38864715_38866879_38867010_38867561_38867611_38873017_38873091_38873290
transcript_71944.known	chr16	-	2774	6	FSM	ENSG00000089486.17	ENST00000563332.6	2774	6	0	0	0	0	multi-exon	FALSE	canonical	3	456	junction_5	50.8999017680781	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAATATGTGCTTTTTTA	-4533185	True	NA	20	True	AATGAA	-10	NA	4538470	4510674	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4512684_4512790_4513065_4513695_4513852_4514045_4514145_4514574_4514665_4538324
transcript_71945.known	chr16	-	2706	6	FSM	ENSG00000089486.17	ENST00000567695.6	2706	6	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_5	192.394802424598	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGCTTTTTTAAAACCC	-4537551	True	NA	26	True	AATACA	-3	NA	4538773	4510668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4512684_4512790_4513065_4513695_4513852_4514045_4514145_4514574_4514665_4538701
transcript_71959.known	chr16	-	799	3	FSM	ENSG00000153443.13	ENST00000587615.1	799	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	138	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCCTTCCTTCGAAGACG	-4609799	True	NA	NA	False	NA	NA	NA	4614872	4609367	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4609909_4610492_4610556_4614677
transcript_71960.known	chr16	-	1374	3	FSM	ENSG00000153443.13	ENST00000283474.12	1374	3	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_1	3	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCAGGCTCTGTGGTCTT	-4609815	True	NA	-5	True	NA	NA	NA	4614888	4608883	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4609984_4610492_4610556_4614677
transcript_71961.known	chr16	-	1275	3	FSM	ENSG00000153443.13	ENST00000591897.5	1275	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	137.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGGCTCTGTGGTCTTA	-4614386	True	NA	-4	True	NA	NA	NA	4615027	4608882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4609984_4610492_4610556_4614916
transcript_71962.known	chr16	-	1462	3	FSM	ENSG00000153443.13	ENST00000590965.1	1462	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	138	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGGCTCTGTGGTCTTA	-4609801	True	NA	-4	True	NA	NA	NA	4614874	4608882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4609984_4610492_4610657_4614677
transcript_71964.known	chr16	-	2641	1	FSM	ENSG00000153443.13	ENST00000590891.1	2641	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGGCTCTGTGGTCTTA	-4611479	False	NA	-4	True	NA	NA	NA	4611523	4608882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4608900_4611500
transcript_71965.known	chr16	-	1305	2	FSM	ENSG00000153443.13	ENST00000591401.5	1305	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGGCTCTGTGGTCTTA	-4609808	True	NA	-4	True	NA	NA	NA	4614881	4608882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4609984_4614677
transcript_71966.known	chr16	+	1898	18	FSM	ENSG00000102858.13	ENST00000587747.5	1898	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	80.7325028982841	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTGGCCTCCACTTGGT	4617980	True	NA	NA	False	NA	NA	NA	4624845	4688843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_4625049_4650364_4650484_4651962_4652052_4652677_4652825_4657245_4657364_4664708_4664776_4665101_4665152_4668264_4668313_4671390_4671460_4672399_4672517_4673497_4673658_4677462_4677573_4680031_4680098_4681549_4681777_4682822_4682947_4683223_4683270_4683842_4683933_4688795
transcript_71967.nic	chr16	+	4054	18	NIC	ENSG00000102858.13	novel	6425	17	NA	NA	-77	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_17	73.6333383197498	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGTCTGCTCCTTCCT	4624577	False	NA	14	True	AATAAA	-13	NA	4624746	4690972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_4625049_4650364_4650484_4651962_4652052_4652677_4652825_4657245_4657364_4664708_4664776_4665101_4665152_4668264_4668313_4671390_4671460_4673497_4673658_4677462_4677573_4680031_4680098_4681549_4681777_4682822_4682947_4683223_4683270_4683842_4683933_4686258_4686304_4688795
transcript_7197.known	chr1	-	750	4	FSM	ENSG00000214114.9	ENST00000494695.4	750	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	162.708327998293	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTTTTGTACGGGTTCC	-38868864	True	NA	NA	False	NA	NA	NA	38873368	38864235	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_38864715_38866879_38867000_38873017_38873091_38873290
transcript_71970.known	chr16	+	6425	17	FSM	ENSG00000102858.13	ENST00000399577.9	6425	17	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_16	66.2267647933975	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGTCTGCTCCTTCCT	4618002	True	NA	14	True	AATAAA	-13	NA	4624867	4690972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_4625049_4650364_4650484_4651962_4652052_4652677_4652825_4657245_4657364_4664708_4664776_4665101_4665152_4668264_4668313_4671390_4671460_4673497_4673658_4677462_4677573_4680031_4680098_4681549_4681777_4682822_4682947_4683223_4683270_4683842_4683933_4686258
transcript_71972.known	chr16	+	3930	17	FSM	ENSG00000102858.13	ENST00000262370.12	3930	17	0	0	0	0	multi-exon	TRUE	canonical	3	54	junction_12	54.9715480385081	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGTCTGCTCCTTCCT	4617960	True	NA	14	True	AATAAA	-13	NA	4624825	4690972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_4625049_4650364_4650484_4651962_4652052_4652677_4652825_4657245_4657364_4664708_4664776_4665101_4665152_4668264_4668313_4671390_4671460_4673497_4673658_4677462_4677573_4680031_4680098_4681549_4681777_4682822_4682947_4683223_4683270_4683842_4683933_4688795
transcript_71973.known	chr16	+	1841	17	FSM	ENSG00000102858.13	ENST00000586183.5	1841	17	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_16	63.4772350925905	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTTGATCAAAGAGCA	4618095	False	NA	-30	True	NA	NA	NA	4624960	4689039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_4625049_4650364_4650484_4651962_4652052_4652677_4652825_4657245_4657364_4664708_4664776_4665101_4665152_4668264_4668313_4671390_4671460_4673497_4673658_4677462_4677573_4681549_4681777_4682822_4682947_4683223_4683270_4683842_4683933_4686258_4686304_4688795
transcript_71977.known	chr16	+	6405	16	FSM	ENSG00000102858.13	ENST00000415496.5	6405	16	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_15	50.5324538182037	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCTGCTCCTTCCTCC	4617958	True	NA	16	True	AATAAA	-15	NA	4624823	4690974	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_4625049_4650364_4650484_4651962_4652052_4652677_4652825_4657245_4657364_4664708_4664776_4665101_4665152_4668264_4668313_4671390_4671460_4673497_4673658_4677462_4677573_4681549_4681777_4682822_4682947_4683223_4683270_4683842_4683933_4686258
transcript_71978.known	chr16	+	1665	16	FSM	ENSG00000102858.13	ENST00000588994.5	1665	16	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_11	28.8795198482708	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGGCCGAGCTGGCAG	4618095	False	NA	NA	False	NA	NA	NA	4624960	4688908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_4625049_4650364_4650484_4651962_4652052_4652677_4652825_4657245_4657364_4664708_4664776_4665101_4665152_4668264_4668313_4671390_4671460_4673497_4673658_4677462_4677573_4681549_4681777_4682822_4682947_4683223_4683270_4683842_4683933_4688795
transcript_71981.known	chr16	+	1575	15	FSM	ENSG00000102858.13	ENST00000536343.5	1575	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	59.5850018794964	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAGACGGCCCACGGCCT	4617976	True	NA	NA	False	NA	NA	NA	4624841	4688809	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_4625049_4650364_4650484_4651962_4652052_4652677_4652825_4657245_4657364_4664708_4664776_4665101_4665152_4668264_4668313_4671390_4671460_4673497_4673658_4681549_4681777_4682822_4682947_4683223_4683270_4683842_4683933_4688795
transcript_71984.known	chr16	+	1349	3	FSM	ENSG00000168101.14	ENST00000304301.10	1349	3	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_2	11.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCCTGTGTGTTTGTTT	4688050	True	NA	28	True	AATAAA	-32	NA	4693693	4695859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_4693880_4693977_4694239_4694957
transcript_71985.known	chr16	+	2040	2	FSM	ENSG00000168101.14	ENST00000405142.1	2040	2	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGCTGCCCTGTGTGTTT	4688074	True	NA	24	True	AATAAA	-28	NA	4693717	4695855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_4693880_4693977
transcript_71992.known	chr16	-	2772	18	FSM	ENSG00000168096.15	ENST00000304283.9	2772	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_17	51.2424861569309	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGGGCTCAGTTCTGGT	-4732003	True	NA	-3	True	AATAAA	-16	NA	4734271	4696510	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4696897_4697016_4697105_4697332_4697417_4697976_4698063_4698426_4698600_4698799_4698942_4699051_4699177_4700969_4701135_4701433_4701544_4702101_4702243_4705094_4705254_4714050_4714187_4724749_4724832_4726658_4726781_4726978_4727178_4729979_4730152_4731511_4731580_4733937
transcript_72002.nic	chr16	-	2603	17	NIC	ENSG00000168096.15	novel	2302	17	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_14	36.083182976977	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAAGGGCTCAGTTCTGG	NA	False	NA	-4	True	AATAAA	-15	NA	4734389	4696511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_4696897_4697016_4697105_4697332_4697417_4697976_4698063_4698426_4698600_4698799_4698942_4699051_4699177_4700969_4701135_4701433_4701544_4702101_4702243_4705094_4705254_4714050_4714187_4724749_4724832_4726658_4726781_4726978_4727178_4729979_4730152_4734155
transcript_72003.known	chr16	-	2302	17	FSM	ENSG00000168096.15	ENST00000592077.5	2302	17	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_16	49.3371294640254	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAAGGGCTCAGTTCTGG	-4731951	True	NA	-4	True	AATAAA	-15	NA	4734219	4696511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4696897_4697016_4697105_4697332_4697417_4697976_4698063_4698426_4698600_4698799_4698942_4699051_4699177_4700969_4701135_4701433_4701544_4702101_4702243_4705094_4705254_4714050_4714187_4724749_4724832_4726658_4726781_4729979_4730152_4731511_4731580_4734155
transcript_72005.nic	chr16	-	2676	17	NIC	ENSG00000168096.15	novel	2291	16	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_14	38.6279832990282	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAAGGGCTCAGTTCTGG	NA	False	NA	-4	True	AATAAA	-15	NA	4734388	4696511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_4696897_4697016_4697105_4697332_4697417_4697976_4698063_4698426_4698600_4698799_4698942_4699051_4699177_4700969_4701135_4701433_4701544_4702101_4702243_4705094_4705254_4714050_4714187_4724749_4724832_4726658_4726855_4726978_4727178_4729979_4730152_4734155
transcript_72014.nic	chr16	-	2398	16	NIC	ENSG00000168096.15	novel	2302	17	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_14	33.3235985785182	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAAGGGCTCAGTTCTGG	NA	False	NA	-4	True	AATAAA	-15	NA	4734383	4696511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_4696897_4697016_4697105_4697332_4697417_4697976_4698063_4698426_4698600_4698799_4698942_4699051_4699177_4700969_4701135_4701433_4701544_4702101_4702243_4705094_4705254_4714050_4714187_4724749_4724832_4726658_4726781_4729979_4730152_4734155
transcript_72017.known	chr16	-	2291	16	FSM	ENSG00000168096.15	ENST00000590193.5	2291	16	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_13	41.5352059502939	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAAGGGCTCAGTTCTGG	-4731931	True	NA	-4	True	AATAAA	-15	NA	4734199	4696511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4696897_4697016_4697105_4697332_4697417_4697976_4698063_4698426_4698600_4698799_4698942_4699051_4699177_4700969_4701135_4701433_4701544_4702101_4702243_4705094_4705254_4714050_4714187_4724749_4724832_4726978_4727178_4729979_4730152_4734155
transcript_72038.known	chr16	-	2272	15	FSM	ENSG00000168096.15	ENST00000450067.6	2272	15	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_13	38.6937214756174	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGGCTCAGTTCTGGTC	NA	False	NA	-2	True	AATAAA	-17	NA	4734377	4696509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4696897_4697016_4697105_4697332_4697417_4697976_4698063_4698426_4698600_4698799_4698942_4699051_4699177_4700969_4701135_4701433_4701544_4702101_4702243_4705094_4705254_4714050_4714187_4724749_4724832_4729979_4730152_4734155
transcript_7207.known	chr1	+	2688	5	FSM	ENSG00000174574.16	ENST00000432648.8	2688	5	0	0	0	0	multi-exon	FALSE	canonical	3	2179	junction_2	102.196807680084	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAAGGGTGATTTGTTTC	38948954	True	NA	44	True	ATTAAA	-19	NA	38991275	39006059	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_38991601_38998170_38998312_39000971_39001107_39003346_39003419_39004044
transcript_72072.known	chr16	-	834	2	FSM	ENSG00000168096.15	ENST00000590689.1	834	2	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTGATCCCTGGCCTTC	-4731927	True	NA	NA	False	AAAAAG	-7	NA	4734195	4729357	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4730152_4734155
transcript_72076.known	chr16	-	2397	1	FSM	ENSG00000103199.14	ENST00000591026.1	2397	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGGTGCAGTGGCTCAC	NA	False	NA	NA	False	AATATA	-42	NA	4753188	4750791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4750800_4753200
transcript_72077.known	chr16	-	5824	6	FSM	ENSG00000103199.14	ENST00000219478.11	5824	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	3.12409987036266	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-4766534	True	NA	NA	False	NA	NA	NA	4767162	4748238	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4753059_4760491_4760589_4762270_4762336_4762572_4762757_4765564_4766077_4767016
transcript_72078.known	chr16	-	2210	7	FSM	ENSG00000168096.15	ENST00000589035.5	2210	7	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_6	14.2760483172184	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAAGGGCTCAGTTCTGG	NA	False	NA	-4	True	AATAAA	-15	NA	4700303	4696511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4696897_4697016_4697105_4697332_4697417_4697976_4698063_4698426_4698600_4698799_4698942_4699051
transcript_72079.known	chr16	-	1418	11	FSM	ENSG00000067836.13	ENST00000322048.12	1418	11	0	0	0	0	multi-exon	TRUE	canonical	3	279	junction_7	19.2429207762231	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGCCCCTGTCTGTCT	-4800017	True	NA	-7	True	AATAAA	-16	NA	4802633	4796967	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4797502_4797713_4797841_4797937_4797988_4798070_4798185_4798568_4798668_4799685_4799782_4800497_4800579_4801266_4801322_4801502_4801586_4802381_4802454_4802526
transcript_72081.nnic	chr16	-	1781	11	NNC	ENSG00000067836.13	novel	1418	11	NA	NA	-95	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	91.1144335437586	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGCCCCTGTCTGTCT	-4802915	False	NA	-7	True	AATAAA	-16	NA	4802975	4796967	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_4797502_4797713_4797862_4797937_4797988_4798070_4798185_4798568_4798668_4799685_4799782_4800497_4800579_4801266_4801322_4801502_4801586_4802381_4802454_4802526
transcript_72082.nic	chr16	-	1634	10	NIC	ENSG00000067836.13	novel	1418	11	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	66	junction_9	81.638921968917	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGCCCCTGTCTGTCT	-4802861	False	NA	-7	True	AATAAA	-16	NA	4802921	4796967	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_4797502_4797713_4797841_4797937_4797988_4798070_4798185_4798568_4798668_4799685_4799782_4800497_4800579_4801266_4801322_4801502_4801586_4802526
transcript_72083.known	chr16	-	1362	10	FSM	ENSG00000067836.13	ENST00000587843.5	1362	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_7	92.4675451906248	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGAGCCCCTGTCTGTC	-4800017	True	NA	-8	True	AATAAA	-15	NA	4802633	4796968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4797502_4797713_4797841_4797937_4797988_4798070_4798185_4798568_4798668_4799685_4799782_4800497_4800579_4801502_4801586_4802381_4802454_4802526
transcript_72100.known	chr16	+	394	4	FSM	ENSG00000267795.6	ENST00000588606.5	394	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	3.39934634239519	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGTCTGCAGTGTCTT	4795324	True	NA	NA	False	NA	NA	NA	4795377	4796281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_4795450_4795714_4795859_4795947_4796034_4796189
transcript_72102.known	chr16	+	6443	18	FSM	ENSG00000118900.15	ENST00000262376.11	6443	18	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	13.2644124136051	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTCTTCCTGTAGGAGCT	4845960	True	NA	62	True	AAAACA	-40	NA	4847480	4882401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_4848211_4852878_4853167_4857989_4858077_4858567_4858664_4859024_4859160_4859864_4859969_4860663_4861103_4868832_4868904_4870211_4870342_4870515_4870635_4870843_4870973_4871154_4871302_4872883_4872935_4873030_4873074_4874210_4875435_4876870_4877112_4877384_4877475_4880082
transcript_72106.known	chr16	-	3527	18	FSM	ENSG00000140632.17	ENST00000588732.5	3527	18	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_14	269.145385905695	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCCGCAGGAGTCCTG	-4832852	True	NA	-1	True	AATAAA	-19	NA	4847271	4803202	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4804149_4804521_4805311_4811169_4811295_4811622_4811803_4812085_4812249_4813736_4813839_4814536_4814648_4817597_4817698_4821379_4821454_4821546_4821598_4822874_4822932_4823820_4823908_4831978_4832222_4832773_4832913_4843403_4843603_4845073_4845154_4846173_4846211_4847227
transcript_72114.nic	chr16	-	3370	17	NIC	ENSG00000140632.17	novel	3527	18	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	254	junction_1	145.988106857203	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCCGCAGGAGTCCTG	-4832894	True	NA	-1	True	AATAAA	-19	NA	4847313	4803202	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_4804149_4804521_4805311_4811169_4811295_4811622_4811803_4812085_4812249_4813736_4813839_4814536_4814648_4817597_4817698_4821379_4821454_4821546_4821598_4822874_4822932_4823820_4823908_4831978_4832222_4832773_4832913_4845073_4845154_4846173_4846211_4847227
transcript_7213.known	chr1	+	1243	4	FSM	ENSG00000174574.16	ENST00000446189.6	1243	4	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_2	1031.63828717024	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGTTAGGTTAATTCTT	38948966	True	NA	75	True	NA	NA	NA	38991287	39004761	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_38991601_38998170_38998312_39003346_39003419_39004044
transcript_72133.known	chr16	-	1831	16	FSM	ENSG00000140632.17	ENST00000591451.5	1831	16	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_6	175.970022699575	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTGTCAGCAGGATTGG	-4832846	True	NA	NA	False	NA	NA	NA	4847265	4805048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4805311_4811169_4811295_4811622_4811803_4812085_4812249_4813736_4813839_4814536_4814630_4817597_4817698_4821379_4821454_4821546_4821598_4822874_4822932_4823820_4823908_4831978_4832222_4832773_4832913_4845073_4845154_4846173_4846211_4847227
transcript_72145.known	chr16	-	3466	15	FSM	ENSG00000140632.17	ENST00000436648.9	3466	15	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_11	202.317151007612	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCCGCAGGAGTCCTG	-4832860	True	NA	-1	True	AATAAA	-19	NA	4847279	4803202	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4805311_4811169_4811295_4811622_4811803_4812085_4812249_4813736_4813839_4814536_4814648_4817597_4817698_4821379_4821454_4821546_4821598_4822874_4822932_4823820_4823908_4832773_4832913_4845073_4845154_4846173_4846211_4847227
transcript_72148.nic	chr16	-	3747	15	NIC	ENSG00000140632.17	novel	3718	16	NA	NA	-80	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_8	196.636720883969	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCCGCAGGAGTCCTG	NA	False	NA	-1	True	AATAAA	-19	NA	4847368	4803202	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_4805311_4811169_4811295_4811622_4811803_4812085_4812249_4813736_4813839_4814536_4814648_4817597_4817698_4821379_4821454_4822874_4822932_4823820_4823908_4831978_4832222_4832773_4832913_4845073_4845154_4846173_4846211_4847227
transcript_7217.known	chr1	+	1330	4	FSM	ENSG00000174574.16	ENST00000372984.8	1330	4	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	1118.55809961853	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACTGAACCTCTAAAGGG	38948966	True	NA	NA	False	NA	NA	NA	38991287	39004854	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_38991601_39000971_39001107_39003346_39003419_39004044
transcript_722.known	chr1	+	2154	3	FSM	ENSG00000224051.7	ENST00000343938.9	2154	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	4	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTGCCTGATTTCCTGC	1323296	True	NA	23	True	AATAAA	-37	NA	1324801	1328896	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1325103_1326835_1327033_1327240
transcript_72212.known	chr16	+	2305	5	FSM	ENSG00000118900.15	ENST00000592120.5	2305	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	39.436658073422	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTAAAGAAAAGAAGAAAAA	4846650	True	NA	NA	False	NA	NA	NA	4846664	4859129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_4848394_4852878_4853167_4857989_4858077_4858567_4858664_4859024
transcript_72213.known	chr16	-	630	4	FSM	ENSG00000140632.17	ENST00000587875.1	630	4	0	0	0	0	multi-exon	FALSE	canonical	3	750	junction_3	46.2913478836908	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGATTTAAATCCTTTCTT	-4832863	True	NA	NA	False	AATACA	-9	NA	4847282	4832454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4832913_4845073_4845154_4846173_4846211_4847227
transcript_72218.known	chr16	-	1091	1	FSM	ENSG00000275056.1	ENST00000614098.1	1091	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCCGGCTTGTTCTCAC	-4825915	False	NA	-2	True	AATAAA	-14	NA	4840334	4839243	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4839200_4840300
transcript_72219.known	chr16	-	3606	14	FSM	ENSG00000140632.17	ENST00000589389.5	3606	14	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_8	204.000899174257	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCCGCAGGAGTCCTG	-4831791	False	NA	-1	True	AATAAA	-19	NA	4846210	4803202	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4805311_4811169_4811295_4811622_4811803_4812085_4812249_4813736_4813839_4814536_4814648_4817597_4817698_4821379_4821454_4822874_4822932_4823820_4823908_4831978_4832222_4832773_4832913_4845073_4845154_4846173
transcript_72220.known	chr16	-	6251	22	FSM	ENSG00000118898.16	ENST00000345988.7	6251	22	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_9	8.95212765599112	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGTTTCTTCTTTTGCA	-4935240	True	NA	0	True	AATAAA	-30	NA	4937148	4882506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_4886048_4887134_4887228_4888101_4888219_4888977_4889062_4890183_4890335_4890727_4890922_4891810_4891950_4892034_4892214_4893212_4893371_4893540_4893639_4894466_4894619_4895260_4895408_4895593_4895717_4897674_4897771_4899012_4899121_4899222_4899385_4900829_4900872_4900963_4901090_4902405_4902527_4903885_4904041_4910849_4910950_4936983
transcript_72228.nic	chr16	-	2541	16	ISM	ENSG00000118898.16	ENST00000345988.7	6251	22	-102	8936	-102	0	5prime_fragment	FALSE	canonical	3	59	junction_3	9.05882013411362	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGCATAAAGCACATA	-4937224	False	NA	NA	False	NA	NA	NA	4937250	4891442	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_4891950_4892034_4892214_4893212_4893371_4893540_4893639_4894466_4894619_4895260_4895408_4895593_4895717_4897674_4897771_4899012_4899121_4899222_4899385_4900829_4900872_4900963_4901090_4902405_4902527_4903885_4904041_4910849_4910950_4936983
transcript_7223.known	chr1	+	495	3	FSM	ENSG00000168653.11	ENST00000372969.8	495	3	0	0	0	0	multi-exon	FALSE	canonical	3	2012	junction_1	2337	1292	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTCTATTTTCTCTTGG	38898454	True	NA	21	True	AATAAA	-17	NA	39026349	39034615	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_39026403_39028722_39028941_39034391
transcript_72240.known	chr16	+	3900	13	FSM	ENSG00000033011.14	ENST00000262374.10	3900	13	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_11	15.4189187544249	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCGCTATGTTGCTCAAG	5068508	True	NA	23	True	GATAAA	-18	NA	5071842	5087379	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_5072058_5072950_5073029_5073152_5073257_5075387_5075537_5077444_5077535_5077906_5078018_5078756_5078879_5079063_5079103_5079747_5079808_5080945_5081057_5082558_5082674_5083681_5083758_5084749
transcript_72244.known	chr16	+	1419	13	FSM	ENSG00000033011.14	ENST00000544428.1	1419	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	83.3999733546454	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATTTCTTCTCTGGAGG	5068913	False	NA	22	True	NA	NA	NA	5072247	5085057	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_5072304_5072950_5073029_5073152_5073257_5075387_5075537_5077444_5077535_5077906_5078018_5078756_5078879_5079063_5079103_5079747_5079808_5080945_5081057_5082558_5082674_5083681_5083758_5084749
transcript_72246.known	chr16	+	3053	12	FSM	ENSG00000033011.14	ENST00000683772.1	3053	12	0	0	0	0	multi-exon	TRUE	canonical	3	273	junction_6	13.5610038878499	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCAGTTTGTGGTTCCTG	5068471	True	NA	-82	True	NA	NA	NA	5071805	5085487	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_5072058_5072950_5073029_5073152_5073257_5075387_5075537_5077444_5077535_5077906_5078018_5078756_5078879_5079063_5079103_5079747_5079808_5080945_5081057_5082558_5083758_5084749
transcript_72249.known	chr16	+	1952	12	FSM	ENSG00000033011.14	ENST00000684335.1	1952	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	86.0082640657472	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTTGGAAATTAACATTC	5068471	True	NA	-64	True	NA	NA	NA	5071805	5085505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_5072058_5072950_5073029_5073152_5073257_5075387_5075537_5077444_5077535_5077906_5078018_5078756_5078879_5079063_5079103_5079747_5079808_5082558_5082674_5083681_5083758_5084749
transcript_7225.nic	chr1	+	4517	34	ISM	ENSG00000127603.32	ENST00000672812.1	6545	36	-86	8446	-86	1727	5prime_fragment	FALSE	canonical	1	3	junction_1	9.18386815799499	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTATTAAATGAGAGATT	39157691	True	NA	NA	False	ATTAAA	-37	NA	39158777	39324735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_39159021_39231181_39231244_39250013_39250104_39254297_39254376_39257935_39258029_39282207_39282375_39283188_39283302_39283408_39283516_39284065_39284186_39284332_39284429_39285082_39285211_39285296_39285391_39285603_39285759_39287285_39287563_39291909_39292039_39292765_39292844_39293457_39293620_39295045_39295151_39295786_39295883_39297619_39297746_39300209_39300363_39302923_39303079_39309569_39309697_39310244_39310429_39310830_39311001_39315512_39315692_39316390_39316530_39317213_39317408_39318452_39318616_39319663_39319748_39322607_39322716_39322909_39323009_39324192_39324346_39324645
transcript_72251.known	chr16	+	2051	12	FSM	ENSG00000033011.14	ENST00000684190.1	2051	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	86.4068791262049	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCCAGTCCAATGAAAGTT	5068471	True	NA	-37	True	NA	NA	NA	5071805	5085532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_5072058_5072950_5073029_5073152_5073257_5075387_5075537_5077444_5077535_5077906_5078018_5078756_5078879_5079747_5079808_5080945_5081057_5082558_5082674_5083681_5083758_5084749
transcript_72262.known	chr16	-	2203	10	FSM	ENSG00000103174.13	ENST00000312251.8	2203	10	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	6.8005083324886	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGACTTAGGTCACTGC	-5033463	True	NA	2	True	AATAAA	-45	NA	5033935	5024843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_5025686_5027134_5027199_5027277_5027380_5027845_5027894_5027979_5028186_5028879_5029009_5030384_5030494_5031744_5031885_5033272_5033729_5033828
transcript_72272.known	chr16	-	2100	9	FSM	ENSG00000103174.13	ENST00000381955.7	2100	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	17.9613299897307	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGACTTAGGTCACTGC	-5033462	True	NA	2	True	AATAAA	-45	NA	5033934	5024843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_5025686_5027134_5027199_5027845_5027894_5027979_5028186_5028879_5029009_5030384_5030494_5031744_5031885_5033272_5033729_5033828
transcript_72279.nic	chr16	-	2447	9	NIC	ENSG00000118894.15	novel	2397	8	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_8	85.6416042294865	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACACCCCTTAATCTACA	-5097365	True	NA	NA	False	AATAAA	-17	NA	5097791	5084303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_5085733_5089106_5089257_5090083_5090350_5090431_5090566_5091793_5091896_5093483_5093565_5095451_5095515_5097279_5097354_5097643
transcript_72286.nic	chr16	-	2741	8	NIC	ENSG00000118894.15	novel	2397	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	88	junction_7	68.7542206496653	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACACCCCTTAATCTACA	-5097369	True	NA	NA	False	AATAAA	-17	NA	5097795	5084303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_5085733_5089106_5089257_5090083_5090350_5090431_5090566_5091793_5091896_5093483_5093565_5095451_5095515_5097279
transcript_72287.known	chr16	-	2397	8	FSM	ENSG00000118894.15	ENST00000427587.9	2397	8	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_5	49.6502050060507	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGATCTGTGGCTACTTTC	-5097369	True	NA	NA	False	AATAAA	-37	NA	5097795	5084283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_5085733_5089106_5089257_5090083_5090350_5090431_5090566_5091793_5091896_5093483_5093565_5095451_5095515_5097643
transcript_72289.known	chr16	-	1282	8	FSM	ENSG00000118894.15	ENST00000587161.5	1282	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	102.272545042097	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAACGTGTGTATCA	-5097340	True	NA	NA	False	NA	NA	NA	5097766	5085362	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_5085733_5089106_5089257_5090083_5090350_5090431_5090566_5091793_5091896_5095451_5095515_5097279_5097354_5097643
transcript_723.known	chr1	+	1101	2	FSM	ENSG00000224051.7	ENST00000464957.1	1101	2	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGGCCTATTACACGCGT	NA	False	NA	NA	False	NA	NA	NA	1324755	1327994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1325103_1327240
transcript_72303.known	chr16	-	2268	7	FSM	ENSG00000118894.15	ENST00000458008.8	2268	7	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_4	69.7075239044458	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACACCCCTTAATCTACA	-5097362	True	NA	NA	False	AATAAA	-17	NA	5097788	5084303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_5085733_5089106_5089257_5090083_5090350_5090431_5090566_5093483_5093565_5095451_5095515_5097643
transcript_7231.known	chr1	+	4338	32	FSM	ENSG00000127603.32	ENST00000524432.5	4338	32	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_11	7.27946665322832	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGACAGTTGGGTCCAA	39102123	True	NA	NA	False	AATACA	-36	NA	39105410	39323008	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_39105718_39231181_39231244_39250013_39250104_39254297_39254376_39257935_39258029_39282207_39282375_39283188_39283302_39283408_39283516_39284065_39284186_39284332_39284429_39285082_39285211_39285296_39285391_39285603_39285759_39287285_39287563_39291909_39292039_39292765_39292844_39293457_39293620_39295045_39295151_39295786_39295883_39297619_39297746_39300209_39300363_39302923_39303079_39309569_39309697_39310244_39310429_39310830_39311001_39315512_39315692_39316390_39316530_39317213_39317408_39318452_39318616_39319663_39319748_39322607_39322716_39322909
transcript_72311.known	chr16	-	873	6	FSM	ENSG00000118894.15	ENST00000587133.1	873	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	99.5035677752311	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATGGGAAAGCGGATAAA	-5097316	True	NA	NA	False	NA	NA	NA	5097742	5085571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_5085733_5089106_5089257_5090083_5090350_5090431_5090566_5095451_5095515_5097643
transcript_72322.known	chr16	-	2260	11	FSM	ENSG00000103174.13	ENST00000562746.5	2260	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	20.0159936051149	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCACCAGGTGGTGTGTGG	-5033446	True	NA	-26	True	AATAAA	-17	NA	5033918	5024871	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_5025686_5027134_5027199_5027277_5027380_5027845_5027894_5027979_5028186_5028296_5028399_5028879_5029009_5030384_5030494_5031744_5031885_5033272_5033729_5033828
transcript_72323.known	chr16	+	1580	3	FSM	ENSG00000078328.23	ENST00000585867.2	1580	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCAGGCATGTTGTCAG	5239556	True	NA	NA	False	AATACA	-18	NA	5239814	5600151	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_5240106_5467215_5467255_5598901
transcript_72335.known	chr16	+	4974	11	FSM	ENSG00000067365.15	ENST00000381920.8	4974	11	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_10	25.3355481487968	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTGGGCGTGGTGGCGG	8618964	True	NA	NA	False	AATACA	-17	NA	8621697	8649654	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_8621776_8625495_8625799_8628729_8629111_8635038_8635080_8635167_8635313_8639090_8639163_8641130_8641185_8642126_8642208_8642462_8642566_8644556_8644726_8646107
transcript_72344.nnic	chr16	+	1371	10	NIC	ENSG00000067365.15	novel	4974	11	NA	NA	-2	0	intron_retention	FALSE	canonical	3	34	junction_9	50.1526066183731	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACATGCTTGAGATTTTG	8618962	True	NA	17	True	AGTAAA	-18	NA	8621695	8646218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_8621776_8625495_8625799_8628729_8629111_8635038_8635080_8635167_8635313_8639090_8639163_8641130_8641185_8642126_8642208_8642462_8642566_8646107
transcript_72349.known	chr16	+	1510	10	FSM	ENSG00000067365.15	ENST00000163678.11	1510	10	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	41.5980175216127	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGAGATTTTGTCATTT	8618957	True	NA	23	True	AGTAAA	-24	NA	8621690	8646224	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_8621776_8625495_8625799_8628729_8629111_8635167_8635313_8639090_8639163_8641130_8641185_8642126_8642208_8642462_8642566_8644556_8644726_8646107
transcript_7235.nnic	chr1	-	2716	17	NNC	ENSG00000090621.15	novel	3142	16	NA	NA	-114	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	170.698198584519	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTCTGTCTCTGACCAC	-39564851	True	NA	-14	True	AATAAA	-21	NA	39576904	39560815	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39563835_39563923_39564422_39564543_39564685_39564774_39565105_39565379_39567750_39567847_39568801_39568940_39569594_39569690_39569862_39570003_39571233_39571350_39572392_39572587_39575758_39575977_39576516
transcript_72354.nnic	chr16	+	1386	9	NIC	ENSG00000067365.15	novel	1510	10	NA	NA	-43	0	intron_retention	FALSE	canonical	3	34	junction_8	61.8546683767685	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACATGCTTGAGATTTTG	8618906	True	NA	17	True	AGTAAA	-18	NA	8621639	8646218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_8621776_8625495_8625799_8628729_8629111_8635167_8635313_8639090_8639163_8641130_8641185_8642126_8642208_8642462_8642566_8646107
transcript_7236.nic	chr1	-	2900	17	NIC	ENSG00000090621.15	novel	3142	16	NA	NA	-86	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_16	164.342202051086	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTCTGTCTCTGACCAC	-39564823	True	NA	-14	True	AATAAA	-21	NA	39576876	39560815	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39563835_39563923_39564422_39564543_39564685_39564774_39565105_39565379_39567750_39567847_39568801_39568940_39569594_39569690_39569862_39570003_39571233_39571350_39572392_39572587_39575758_39576224_39576551
transcript_72361.known	chr16	+	4779	16	FSM	ENSG00000183044.12	ENST00000268251.13	4779	16	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	4.34306599330729	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGTGAATGTGGACTTT	8673822	True	NA	5	True	AATAAA	-15	NA	8674616	8784570	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_8674712_8735698_8735810_8746000_8746099_8748107_8748138_8750421_8750540_8757756_8757807_8764068_8764150_8764737_8764831_8766207_8766271_8768192_8768257_8768824_8768974_8772779_8772918_8774889_8775058_8776343_8776491_8779478_8779591_8781308
transcript_7237.nnic	chr1	-	2668	17	NNC	ENSG00000090621.15	novel	3048	16	NA	NA	-114	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	182.57733806527	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTCTGTCTCTGACCAC	-39564851	True	NA	-14	True	AATAAA	-21	NA	39576904	39560815	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39563835_39563923_39564470_39564543_39564685_39564774_39565105_39565379_39567750_39567847_39568801_39568940_39569594_39569690_39569862_39570003_39571233_39571350_39572392_39572587_39575758_39575977_39576516
transcript_72370.known	chr16	+	2285	8	FSM	ENSG00000140650.13	ENST00000268261.9	2285	8	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_2	35.1556306634789	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTTCTCATTCCGATT	8792003	True	NA	27	True	ATTAAA	-15	NA	8797838	8849325	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_8797949_8801798_8801911_8804766_8804844_8806315_8806408_8811078_8811179_8811637_8811714_8812990_8813107_8847723
transcript_72372.known	chr16	+	986	7	FSM	ENSG00000140650.13	ENST00000566604.5	986	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	143.787748666799	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTCCCCATCATTCTAG	8792001	True	NA	NA	False	NA	NA	NA	8797836	8848124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_8797949_8801798_8801911_8804766_8804844_8806315_8806408_8811637_8811714_8812990_8813107_8847723
transcript_72373.known	chr16	+	931	7	FSM	ENSG00000140650.13	ENST00000562318.5	931	7	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	144.391154699848	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTCCCCACCCACCCCC	8792006	True	NA	NA	False	NA	NA	NA	8797841	8848051	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_8797949_8801798_8801911_8806315_8806408_8811078_8811179_8811637_8811714_8812990_8813107_8847723
transcript_72376.known	chr16	+	1557	6	FSM	ENSG00000140650.13	ENST00000566540.5	1557	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	195.399488228603	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCCTATCTGCACTCAC	8792006	True	NA	NA	False	NA	NA	NA	8797841	8848777	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_8797949_8801798_8801911_8806315_8806408_8811637_8811714_8812990_8813107_8847723
transcript_72377.known	chr16	+	793	6	FSM	ENSG00000140650.13	ENST00000565221.5	793	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	146.030133876539	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGGAATGCCTCGCACAAA	8792031	True	NA	NA	False	NA	NA	NA	8797866	8848030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_8797949_8801798_8801911_8811078_8811179_8811637_8811714_8812990_8813107_8847723
transcript_72379.known	chr16	+	1085	7	FSM	ENSG00000140650.13	ENST00000682008.1	1085	7	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_2	35.3777236878425	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCAGTCCCCGGTGCCACT	8797699	True	NA	NA	False	ATTAAA	-29	NA	8797715	8813385	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_8797949_8801798_8801911_8804766_8804844_8806315_8806408_8811078_8811179_8811637_8811714_8812990
transcript_72382.known	chr16	+	1002	5	FSM	ENSG00000140650.13	ENST00000570076.5	1002	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	177.504049249588	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACGAAGCTCCCGCCTGCA	8792014	True	NA	NA	False	NA	NA	NA	8797849	8848322	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_8797949_8801798_8801911_8811637_8811714_8812990_8813107_8847723
transcript_72386.known	chr16	-	556	5	FSM	ENSG00000153048.11	ENST00000565287.5	556	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1087.80613507187	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAGGCACCAAGCATGAG	-8838668	True	NA	NA	False	NA	NA	NA	8869006	8855213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_8855327_8858349_8858473_8859170_8859336_8860104_8860219_8868965
transcript_72393.known	chr16	+	1036	4	FSM	ENSG00000140650.13	ENST00000564030.5	1036	4	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_2	44.5745318414999	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAGGCTGGAGTGCAGTGG	8791985	True	NA	NA	False	NA	NA	NA	8797820	8807034	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_8797949_8801798_8801911_8804766_8804844_8806315
transcript_72396.known	chr16	-	565	4	FSM	ENSG00000153048.11	ENST00000567908.5	565	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1048.39379793833	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCATCACTCACCTGGCAC	-8867862	False	NA	NA	False	NA	NA	NA	8867887	8855230	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_8855327_8858349_8858473_8859170_8859336_8867706
transcript_72397.known	chr16	-	3026	4	FSM	ENSG00000153048.11	ENST00000396593.6	3026	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	1037.13397827325	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGTGTTTGTGTGGAGG	-8868376	False	NA	-2	True	AATAAA	-22	NA	8868401	8852941	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_8855327_8858349_8858473_8859170_8859336_8868048
transcript_72399.known	chr16	-	2709	4	FSM	ENSG00000153048.11	ENST00000311052.10	2709	4	0	0	0	0	multi-exon	FALSE	canonical	3	1448	junction_3	374.904728638564	1282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTATGCGTGTGTTTGTGT	-8838668	True	NA	-7	True	AATAAA	-17	NA	8869006	8852946	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_8855327_8858349_8858473_8859170_8859336_8868965
transcript_72412.known	chr16	-	1439	2	FSM	ENSG00000184857.8	ENST00000333050.7	1439	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGGTACGTTATTTTATA	-8796393	True	NA	1	True	AATAAA	-16	NA	8797639	8795179	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_8796591_8797611
transcript_72414.known	chr16	-	1913	2	FSM	ENSG00000153048.11	ENST00000563815.5	1913	2	0	0	0	0	multi-exon	FALSE	canonical	3	1448	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGCG	-8838668	True	NA	NA	False	AATACA	-10	NA	8869006	8857463	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_8859336_8868965
transcript_72415.known	chr16	-	5831	31	FSM	ENSG00000187555.16	ENST00000344836.9	5831	31	0	0	0	0	multi-exon	FALSE	canonical	1	212	junction_5	117.482050638479	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGTGTTGTAATGTTTCC	-8959194	True	NA	-3	True	ATTAAA	-17	NA	8963906	8892096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_8894105_8894549_8894641_8894783_8894856_8895030_8895151_8895641_8895742_8896998_8897100_8898359_8898438_8898530_8898640_8899120_8899189_8899603_8899758_8900529_8900631_8900989_8901058_8901141_8901235_8902081_8902188_8902380_8902483_8903267_8903403_8904434_8904566_8905186_8905332_8906425_8906583_8908340_8908451_8910744_8910828_8915253_8915345_8915444_8915526_8916501_8916557_8917025_8917157_8919030_8919140_8920358_8920448_8921156_8921296_8923214_8923414_8930292_8930398_8963206
transcript_7242.known	chr1	-	2082	16	FSM	ENSG00000090621.15	ENST00000678625.1	2082	16	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_7	167.22139682336	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTTACGTTTCCCAATAA	-39575773	False	NA	3	True	NA	NA	NA	39575786	39560856	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39563835_39563923_39564422_39564543_39564700_39564774_39565105_39565379_39567750_39567847_39568801_39568940_39569594_39569690_39569862_39570003_39571233_39571350_39572392_39572587_39575758
transcript_72422.known	chr16	+	5952	4	FSM	ENSG00000182831.12	ENST00000327827.12	5952	4	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_3	12.0369800568452	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAGTGACTTGTGTTCCT	9086495	True	NA	NA	False	AATAAA	-36	NA	9091643	9121635	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_9092271_9092920_9093002_9102983_9103260_9116667
transcript_72429.known	chr16	+	10359	3	FSM	ENSG00000182831.12	ENST00000574285.2	10359	3	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_1	3	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTTGGTTGTTAATCT	9092161	False	NA	20	True	AATAAA	-21	NA	9092190	9113181	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_9092271_9092920_9093002_9102983
transcript_7244.known	chr1	-	3048	16	FSM	ENSG00000090621.15	ENST00000372857.7	3048	16	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_6	130.79024768265	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTCTGTCTCTGACCAC	-39576731	False	NA	-14	True	AATAAA	-21	NA	39576744	39560815	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39563835_39563923_39564470_39564543_39564685_39564774_39565105_39565379_39567750_39567847_39568801_39568940_39569594_39569690_39569862_39570003_39571233_39571350_39572392_39572587_39575758
transcript_72444.nnic	chr16	+	3401	5	Fusion	ENSG00000287830.1_ENSG00000283221.1	novel	1797	2	NA	NA	-120331	0	multi-exon	FALSE	canonical	3	24	junction_4	18.8729303501073	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCCCAGAACTGAGAATAAA	9672075	True	NA	-22	True	NA	NA	NA	9674305	9810726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr16_+_9674462_9794521_9794723_9805478_9805525_9807654_9810392_9810465
transcript_7245.nnic	chr1	-	2629	16	NNC	ENSG00000090621.15	novel	3142	16	NA	NA	-114	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	204.066154850714	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTCTGTCTCTGACCAC	-39564851	True	NA	-14	True	AATAAA	-21	NA	39576904	39560815	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39564422_39564543_39564685_39564774_39565105_39565379_39567750_39567847_39568801_39568940_39569594_39569690_39569862_39570003_39571233_39571350_39572392_39572587_39575758_39575977_39576516
transcript_72457.known	chr16	+	3665	12	FSM	ENSG00000166669.14	ENST00000396560.6	3665	12	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	11.6873881309005	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCTATGTCTTTATTTT	10383159	True	NA	19	True	AATAAA	-17	NA	10386054	10483638	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_10386123_10428867_10429017_10430610_10431456_10433524_10433650_10438100_10438236_10440363_10440463_10457371_10457530_10472109_10472184_10473478_10473535_10473922_10473990_10480878_10480965_10481835
transcript_72461.known	chr16	+	576	3	FSM	ENSG00000166669.14	ENST00000566316.5	576	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	1	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATTAGTTCTCATTGTT	10383162	True	NA	11	True	AATAAA	-21	NA	10386057	10387741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_10386123_10387143_10387291_10387377
transcript_72462.known	chr16	+	1681	1	FSM	ENSG00000166669.14	ENST00000562396.1	1681	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATTAGTTCTCATTGTT	10383165	True	NA	11	True	AATAAA	-21	NA	10386060	10387741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_10386100_10387700
transcript_72464.known	chr16	-	5097	5	FSM	ENSG00000213853.10	ENST00000359543.8	5097	5	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	3.03108891324554	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATCTCCCTCTGCTTCTTT	-10578905	True	NA	NA	False	GATAAA	-20	NA	10580598	10528421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_10533093_10537927_10538075_10543569_10543661_10547539_10547678_10580548
transcript_72466.known	chr16	-	3582	2	FSM	ENSG00000213853.10	ENST00000342147.4	3582	2	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAATGTAG	-10578939	True	NA	NA	False	AAAAAG	-2	NA	10580632	10544179	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_10547678_10580548
transcript_72467.known	chr16	-	782	1	FSM	ENSG00000262158.1	ENST00000572729.1	782	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTACTCTTTTAGTATAAG	NA	False	NA	NA	False	NA	NA	NA	10724617	10723835	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_10723800_10724600
transcript_72469.known	chr16	+	1231	11	FSM	ENSG00000103274.11	ENST00000283027.10	1231	11	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_4	26.4166614090426	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCCGAGGCCTGTTTCAC	10740779	True	NA	22	True	AATAAA	-16	NA	10743841	10769351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_10743883_10743960_10744066_10747142_10747277_10752609_10752679_10755720_10755754_10756689_10756781_10757872_10758028_10761363_10761475_10761756_10761860_10767948_10768033_10769046
transcript_72470.nic	chr16	+	1170	10	NIC	ENSG00000103274.11	novel	1231	11	NA	NA	-22	0	combination_of_known_junctions	TRUE	canonical	3	30	junction_9	73.7093055753143	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCCGAGGCCTGTTTCAC	10740756	True	NA	22	True	AATAAA	-16	NA	10743818	10769351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_10743883_10743960_10744066_10747142_10747277_10752609_10752679_10755720_10755754_10756689_10756781_10757872_10758028_10761363_10761475_10761756_10761860_10769046
transcript_72471.known	chr16	+	1185	10	FSM	ENSG00000103274.11	ENST00000433392.6	1185	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	78.4551456345803	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCCGAGGCCTGTTTCAC	10740792	True	NA	22	True	AATAAA	-16	NA	10743854	10769351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_10743883_10743960_10744066_10747142_10747277_10752609_10752679_10756689_10756781_10757872_10758028_10761363_10761475_10761756_10761860_10767948_10768033_10769046
transcript_72475.nic	chr16	-	1184	8	NIC	ENSG00000166676.17	novel	3256	6	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	10	junction_4	4.48580527660217	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCGGACCACACCAGCAT	-10818783	True	NA	-15	True	ATTAAA	-18	NA	10818794	10769237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_10769479_10770271_10770332_10771669_10771799_10773312_10773442_10774038_10774129_10774951_10775097_10818102_10818183_10818484
transcript_72479.known	chr16	-	626	3	FSM	ENSG00000182108.11	ENST00000570992.1	626	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	105.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTAGGAGGCTTACTTCT	-10941707	False	NA	-5	True	GATAAA	-14	NA	10941718	10928941	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_10929075_10929216_10929560_10941568
transcript_72480.known	chr16	-	1393	3	FSM	ENSG00000182108.11	ENST00000469379.5	1393	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGGGCCCTGCCTTTT	-10942120	False	NA	-1	True	ATTAAA	-22	NA	10942131	10928890	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_10929560_10933843_10934005_10941568
transcript_72481.known	chr16	-	1569	2	FSM	ENSG00000182108.11	ENST00000331808.5	1569	2	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_1	0	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGGGCCCTGCCTTTT	-10941404	True	NA	-1	True	ATTAAA	-22	NA	10942468	10928890	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_10929560_10941568
transcript_72487.known	chr16	-	5854	1	FSM	ENSG00000182108.11	ENST00000570440.2	5854	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCTCTGTTATGAAGTA	-10941396	True	NA	NA	False	ATTAAA	-17	NA	10942460	10936606	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_10936600_10942500
transcript_72492.nic	chr16	+	3369	22	NIC	ENSG00000038532.16	novel	6812	24	NA	NA	-41	9741	combination_of_known_junctions	FALSE	canonical	3	29	junction_21	7.44503669759736	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGCGGTCCAGTTGTT	10943171	True	NA	NA	False	NA	NA	NA	10944522	11166974	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_10944798_10957781_10957911_10962454_10962589_10969160_10969310_10971124_10971231_10972937_10973062_10977224_10977400_10979328_10979383_10982877_10982992_11003073_11003258_11020192_11020326_11024820_11024922_11039753_11039877_11042253_11042364_11044027_11044073_11047291_11047343_11051512_11051642_11060901_11061023_11120614_11120767_11123741_11123947_11125978_11126147_11166387
transcript_72493.known	chr16	+	3365	21	FSM	ENSG00000038532.16	ENST00000409552.4	3365	21	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_16	6.81083695297428	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTCGAAAGAGAGCCTTT	10943229	True	NA	NA	False	AGTAAA	-17	NA	10944580	11126787	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_10944798_10957781_10957911_10962454_10962589_10969160_10969310_10971124_10971231_10972937_10973062_10977224_10977400_10979328_10979383_10982877_10982992_11003073_11003258_11020192_11020326_11024820_11024922_11039753_11039877_11042253_11042364_11044027_11044073_11047291_11047343_11051512_11051642_11060901_11061023_11120614_11120767_11123741_11123947_11125978
transcript_72501.nic	chr16	+	2176	10	ISM	ENSG00000038532.16	ENST00000409552.4	3365	21	-58	122798	-41	-20930	5prime_fragment	FALSE	canonical	3	39	junction_9	4.44722135470878	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTAGTATTTTTAAAAT	10943171	True	NA	NA	False	NA	NA	NA	10944522	11003989	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_10944798_10957781_10957911_10962454_10962589_10969160_10969310_10971124_10971231_10972937_10973062_10977224_10977400_10979328_10979383_10982877_10982992_11003073
transcript_72511.known	chr16	+	934	2	FSM	ENSG00000175643.10	ENST00000572992.1	934	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCTCAAATGCCTGCAGAA	11312395	True	NA	NA	False	NA	NA	NA	11312899	11317036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_11312938_11316140
transcript_72513.known	chr16	+	1427	2	FSM	ENSG00000175643.10	ENST00000312499.6	1427	2	0	0	0	0	multi-exon	FALSE	canonical	3	1258	junction_1	0	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGAGTTTTTTTTTTTA	11338325	True	NA	9	True	AATAAA	-13	NA	11345458	11351760	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_11345767_11350641
transcript_72514.known	chr16	+	818	2	FSM	ENSG00000175643.10	ENST00000576027.1	818	2	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCACTCAAACATTTAGAC	11338316	True	NA	NA	False	NA	NA	NA	11345449	11351365	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_11345544_11350641
transcript_72516.known	chr16	-	1238	2	FSM	ENSG00000185338.7	ENST00000332029.4	1238	2	0	0	0	0	multi-exon	TRUE	canonical	3	878	junction_1	0	1271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATAAGTTTTCTA	-11250372	True	NA	6	True	AATAAA	-25	NA	11256204	11254416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_11255529_11256078
transcript_72517.known	chr16	-	1784	1	FSM	ENSG00000185338.7	ENST00000644787.1	1784	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATAAGTTTTCTA	-11250368	True	NA	6	True	AATAAA	-25	NA	11256200	11254416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_11254400_11256200
transcript_7252.known	chr1	-	2142	15	FSM	ENSG00000090621.15	ENST00000470443.6	2142	15	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_12	205.93509974291	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTTACGTTTCCCAATAA	-39575768	False	NA	3	True	NA	NA	NA	39575781	39560856	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39564422_39564543_39564685_39564774_39565105_39565379_39567750_39567847_39568801_39568940_39569594_39569690_39569862_39570003_39571096_39571350_39572392_39572587_39575758
transcript_72527.known	chr16	-	2440	4	FSM	ENSG00000189067.14	ENST00000622633.5	2440	4	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_3	99.6895180046528	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCCCATTCATTCTCTG	-11581443	True	NA	-8	True	AATAAA	-16	NA	11586919	11547721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_11549746_11553532_11553690_11556510_11556736_11586885
transcript_72528.known	chr16	-	1118	4	FSM	ENSG00000189067.14	ENST00000570904.5	1118	4	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_3	218.187992336884	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAGACTTCATTAGCACA	-11587200	False	NA	NA	False	NA	NA	NA	11587247	11549106	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_11549746_11553532_11553690_11556510_11556736_11587150
transcript_7253.known	chr1	-	2122	15	FSM	ENSG00000090621.15	ENST00000677609.1	2122	15	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_6	202.994885328148	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTTACGTTTCCCAATAA	-39575900	False	NA	3	True	NA	NA	NA	39575913	39560856	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39564422_39564543_39564700_39564774_39565105_39565379_39567750_39567847_39568801_39568940_39569594_39569690_39569862_39570003_39571233_39571350_39572392_39572587_39575758
transcript_72531.known	chr16	-	2632	4	FSM	ENSG00000189067.14	ENST00000571688.5	2632	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	272.833282427199	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCCCATTCATTCTCTG	NA	False	NA	-8	True	AATAAA	-16	NA	11587563	11547721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_11549746_11553532_11553690_11556510_11556736_11587337
transcript_72538.known	chr16	-	3116	12	FSM	ENSG00000153066.13	ENST00000283033.10	3116	12	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_6	22.4595136204263	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCTTGAATGTCATTCAG	-11741915	True	NA	-7	True	AATAAA	-24	NA	11742857	11679082	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_11679838_11684164_11684246_11687856_11687967_11688302_11688446_11691289_11692083_11698124_11698326_11700451_11700565_11721576_11721671_11730644_11730775_11733981_11734080_11736016_11736234_11742476
transcript_72544.nic	chr16	-	2927	10	NIC	ENSG00000153066.13	novel	3116	12	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_7	28.102985211144	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCTTGAATGTCATTCAG	-11742899	False	NA	-7	True	AATAAA	-24	NA	11742911	11679082	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_11679838_11684164_11684246_11687856_11687967_11688302_11688446_11691289_11692083_11698124_11698326_11721576_11721671_11733981_11734080_11736016_11736234_11742476
transcript_7255.known	chr1	-	2470	15	FSM	ENSG00000090621.15	ENST00000372862.7	2470	15	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	165.662384113606	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTCTGTCTCTGACCAC	-39576240	False	NA	-14	True	AATAAA	-21	NA	39576253	39560815	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39564470_39564543_39564685_39564774_39565105_39565379_39567750_39567847_39568801_39568940_39569594_39569690_39569862_39570003_39571233_39571350_39572392_39572587_39575758
transcript_72554.known	chr16	+	3264	2	FSM	ENSG00000184602.6	ENST00000329565.6	3264	2	0	0	0	0	multi-exon	FALSE	canonical	3	626	junction_1	0	380	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACAATTTTCACCTCTGA	11664809	True	NA	18	True	AATAAA	-33	NA	11668454	11679152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_11668541_11675974
transcript_72557.known	chr16	-	3805	23	FSM	ENSG00000122299.12	ENST00000355758.9	3805	23	0	0	0	0	multi-exon	TRUE	canonical	3	225	junction_22	29.427316258007	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCTTTCATTTTTTCCT	-11794173	True	NA	-10	True	AATAAA	-14	NA	11797258	11750596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_11751507_11752668_11752833_11756236_11756371_11758430_11758540_11761405_11761512_11761909_11762044_11762670_11762748_11763477_11763660_11765052_11765154_11765488_11765686_11767416_11767579_11768314_11768502_11769030_11769096_11770782_11770988_11774235_11774520_11774979_11775014_11776319_11776359_11776451_11776533_11776750_11776910_11779165_11779364_11781424_11781465_11782286_11782389_11797123
transcript_72562.nic	chr16	-	2791	21	ISM	ENSG00000122299.12	ENST00000355758.9	3805	23	-145	5725	-145	0	5prime_fragment	FALSE	canonical	3	225	junction_20	23.9905710644828	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAAAAGTGAAGACATAG	NA	False	NA	NA	False	NA	NA	NA	11797403	11756321	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_11756371_11758430_11758540_11761405_11761512_11761909_11762044_11762670_11762748_11763477_11763660_11765052_11765154_11765488_11765686_11767416_11767579_11768314_11768502_11769030_11769096_11770782_11770988_11774235_11774520_11774979_11775014_11776319_11776359_11776451_11776533_11776750_11776910_11779165_11779364_11781424_11781465_11782286_11782389_11797123
transcript_72571.known	chr16	+	808	1	FSM	ENSG00000277369.1	ENST00000615722.1	808	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCGAGGTCTCATTTATA	NA	False	NA	NA	False	NA	NA	NA	11797467	11798275	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_11797500_11798300
transcript_72573.known	chr16	-	1323	9	FSM	ENSG00000171490.13	ENST00000355674.9	1323	9	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_3	770.147865266794	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAATCAAAGAAGAGGCA	-11830548	True	NA	-8	True	NA	NA	NA	11851544	11837965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_11838114_11839694_11839986_11841694_11841818_11841906_11842001_11846500_11846603_11846694_11846844_11847667_11847807_11850278_11850419_11851407
transcript_72575.known	chr16	-	1470	8	FSM	ENSG00000171490.13	ENST00000396503.7	1470	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_7	826.031896404461	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGCCTTTGTAACCTTCTC	-11830584	True	NA	NA	False	NA	NA	NA	11851580	11837717	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_11838114_11839694_11839986_11841694_11841821_11841906_11842001_11846500_11846603_11846694_11846844_11847667_11847807_11851407
transcript_72578.nic	chr16	-	1087	8	ISM	ENSG00000171490.13	ENST00000571133.6	5440	9	-65	5999	-27	0	5prime_fragment	FALSE	canonical	3	2056	junction_2	208.939303753653	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACCTGAATCAAAGAAGG	-11830611	True	NA	-35	True	AGTAAA	-39	NA	11851607	11839848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_11839986_11841694_11841821_11841906_11842001_11846500_11846603_11846694_11846844_11847667_11847807_11850278_11850419_11851407
transcript_72579.nic	chr16	-	994	8	ISM	ENSG00000171490.13	ENST00000571133.6	5440	9	-65	6092	-27	-93	5prime_fragment	FALSE	canonical	3	2056	junction_2	208.939303753653	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGAGGAAGAAGAAGAGGC	-11830611	True	NA	-128	True	AAGAAA	-16	NA	11851607	11839941	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_11839986_11841694_11841821_11841906_11842001_11846500_11846603_11846694_11846844_11847667_11847807_11850278_11850419_11851407
transcript_72582.known	chr16	-	894	7	FSM	ENSG00000171490.13	ENST00000573251.5	894	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	883.343726353954	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACCTGAATCAAAGAAGG	-11830520	True	NA	-35	True	AGTAAA	-39	NA	11851516	11839848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_11839986_11841694_11841821_11841906_11842001_11846694_11846844_11847667_11847807_11850278_11850419_11851407
transcript_72584.known	chr16	-	871	7	FSM	ENSG00000171490.13	ENST00000570767.5	871	7	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_6	909.407988137826	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAGAAGAAAAAAGTTAGTA	-11830546	True	NA	21	True	NA	NA	NA	11851542	11841707	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_11841821_11841906_11842001_11846500_11846603_11846694_11846844_11847667_11847807_11850278_11850414_11851403
transcript_72608.known	chr16	-	2509	15	FSM	ENSG00000103342.13	ENST00000439887.6	2509	15	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_12	492.786972230395	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTTCGGTATTTGAATT	-11898173	True	NA	-16	True	AATAAA	-16	NA	11915878	11872678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_11873172_11875760_11875930_11876085_11876176_11877406_11877581_11883014_11883096_11885180_11885275_11886470_11886612_11886776_11886932_11887569_11887751_11891061_11891140_11894953_11894988_11896557_11896783_11897839_11897882_11897993_11898036_11915368
transcript_72649.nic	chr16	-	1054	6	ISM	ENSG00000103342.13	ENST00000434724.7	7141	15	-81	22973	45	-308	5prime_fragment	FALSE	canonical	3	1628	junction_3	133.962084188027	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTATGAAAGAGAAGCTAAAG	-11916025	False	NA	-14	True	NA	NA	NA	11916037	11891100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_11891140_11894953_11894988_11896557_11896786_11897839_11897882_11897993_11898036_11915368
transcript_72656.nic	chr16	+	2951	20	ISM	ENSG00000048471.14	ENST00000566228.6	8173	21	-40	48926	-40	-2036	5prime_fragment	FALSE	canonical	0	0	junction_14	1.99722799589582	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATGCACTTAGAAAATCAT	11976049	True	NA	NA	False	ATTAAA	-13	NA	11976693	12525361	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_11976814_11999296_11999359_12002990_12003044_12027319_12027445_12042896_12043078_12046383_12046455_12048371_12048621_12051846_12052223_12061527_12061647_12069056_12069133_12078832_12078916_12126632_12126697_12129629_12129759_12199600_12199684_12277932_12278037_12356162_12356280_12398445_12398502_12403447_12403530_12477718_12477860_12524701
transcript_72660.nic	chr16	+	1895	14	NIC	ENSG00000048471.14	novel	8173	21	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	1.07141448286032	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATTTGTGGTGGTTTTTC	11976049	True	NA	NA	False	AATAAA	-18	NA	11976693	12135737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_11976814_11999296_11999359_12002990_12003044_12027319_12027445_12042896_12043078_12046383_12046455_12048371_12048621_12051846_12052223_12061527_12061647_12069056_12069133_12078832_12078916_12126632_12126697_12129629_12129759_12135550
transcript_72663.known	chr16	+	2248	8	FSM	ENSG00000048471.14	ENST00000564111.5	2248	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	0.989743318610787	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	11976100	True	NA	NA	False	NA	NA	NA	11976744	12053284	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_11976814_11999296_11999359_12002990_12003044_12027319_12027445_12042896_12043078_12046383_12046455_12048371_12048621_12051846
transcript_72666.nic	chr16	+	861	7	ISM	ENSG00000048471.14	ENST00000564111.5	2248	8	-51	4664	-40	-3248	5prime_fragment	FALSE	canonical	1	2	junction_3	1	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGGAACGGGTGCTC	11976049	True	NA	NA	False	NA	NA	NA	11976693	12048620	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_11976814_11999296_11999359_12002990_12003044_12027319_12027445_12042896_12043078_12046383_12046455_12048371
transcript_72668.known	chr16	-	6143	4	FSM	ENSG00000103381.12	ENST00000381774.9	6143	4	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	14.290634073484	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGCAGTTCTT	-12803059	True	NA	NA	False	ATTAAA	-21	NA	12803887	12659798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_12665116_12704623_12705050_12781184_12781404_12803706
transcript_72671.known	chr16	-	1993	3	FSM	ENSG00000103381.12	ENST00000433677.6	1993	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	59.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGCTCTTCTTTTAGTGT	-12803023	True	NA	-1	True	ATTAAA	-16	NA	12803851	12663486	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_12665116_12781184_12781404_12803706
transcript_72673.known	chr16	+	4043	2	FSM	ENSG00000237515.9	ENST00000423335.2	4043	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCTGAGCATTTTCATTA	12901738	False	NA	19	True	AATAAA	-23	NA	12901756	12911650	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_12902628_12908478
transcript_72675.nic	chr16	+	2808	2	ISM	ENSG00000237515.9	ENST00000566106.1	555	3	121014	-2388	121014	2388	3prime_fragment	FALSE	canonical	3	28	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATCTTTCAAAGAACGCA	NA	False	NA	NA	False	AAAAAG	-10	NA	13203393	13237681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_13203550_13235029
transcript_72677.known	chr16	+	2803	8	FSM	ENSG00000175595.16	ENST00000683407.1	2803	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	8.29556065197599	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATCTTTTCTCTGTTTA	13918614	True	NA	NA	False	NA	NA	NA	13920157	13936727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_13920373_13922030_13922212_13926560_13926757_13928027_13928236_13930709_13930891_13932156_13932286_13934191_13934303_13935145
transcript_72681.known	chr16	+	2073	6	FSM	ENSG00000175595.16	ENST00000575156.5	2073	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	7.57363849150459	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGAATATCCTTTTTAA	13918613	True	NA	NA	False	AATAAA	-17	NA	13920156	13933247	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_13920373_13922030_13922212_13926560_13926757_13928027_13928236_13930709_13930891_13932156
transcript_72683.known	chr16	+	8804	17	FSM	ENSG00000186260.17	ENST00000571589.6	8804	17	0	0	0	0	multi-exon	TRUE	canonical	2	27	junction_7	12.2931319748061	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGATTCTTGCTGTGCAG	14067731	True	NA	7	True	AATAAA	-16	NA	14071318	14266773	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_14071366_14079289_14079355_14140543_14140761_14210242_14210309_14212353_14212410_14213544_14213621_14217125_14217288_14218819_14218999_14234145_14234284_14240236_14240485_14245527_14245661_14246472_14247508_14248925_14249082_14251861_14252024_14252364_14252503_14258100_14258162_14260908
transcript_72694.known	chr16	-	3071	24	FSM	ENSG00000140694.17	ENST00000437198.7	3071	24	0	0	0	0	multi-exon	FALSE	canonical	1	107	junction_21	53.4902425602029	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGTTTTCTCCTCTCTT	-14629772	True	NA	-1	True	ATTAAA	-16	NA	14630260	14435700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_14436773_14446887_14447082_14482637_14482828_14552020_14552096_14554064_14554152_14555653_14555710_14580873_14580944_14582180_14582292_14584346_14584423_14584748_14584792_14586317_14586362_14593300_14593379_14599903_14599961_14604145_14604227_14606483_14606527_14608280_14608320_14609057_14609124_14610643_14610810_14617589_14617651_14627105_14627188_14627268_14627337_14628171_14628252_14629596_14629675_14630106
transcript_72695.known	chr16	-	2100	24	FSM	ENSG00000140694.17	ENST00000341484.11	2100	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	81.5211942010773	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAACCAAGTTGTCTCCTG	-14629788	True	NA	NA	False	NA	NA	NA	14630276	14436604	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_14436773_14446887_14447082_14482637_14482828_14552020_14552096_14554064_14554152_14555653_14555710_14580873_14580944_14582180_14582292_14584346_14584423_14584748_14584792_14586317_14586362_14593300_14593379_14599903_14599961_14604145_14604227_14606483_14606527_14608280_14608320_14609057_14609124_14610643_14610810_14617589_14617651_14627105_14627188_14627268_14627337_14628171_14628252_14629596_14629675_14630189
transcript_7270.known	chr1	-	4077	5	FSM	ENSG00000163909.8	ENST00000372852.4	4077	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	2.06155281280883	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGAAGGTGAGATATCTT	-39639374	True	NA	2	True	AATAAA	-20	NA	39639643	39623434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_39627181_39630226_39630309_39631495_39631580_39632648_39632716_39639545
transcript_72701.nic	chr16	-	2971	23	NIC	ENSG00000140694.17	novel	3071	24	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	1	14	junction_4	81.361515970339	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGTTTTCTCCTCTCTT	-14629759	True	NA	-1	True	ATTAAA	-16	NA	14630247	14435700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_14436773_14446887_14447082_14482637_14482828_14552020_14552096_14555653_14555710_14580873_14580944_14582180_14582292_14584346_14584423_14584748_14584792_14586317_14586362_14593300_14593379_14599903_14599961_14604145_14604227_14606483_14606527_14608280_14608320_14609057_14609124_14610643_14610810_14617589_14617651_14627105_14627188_14627268_14627337_14628171_14628252_14629596_14629675_14630106
transcript_72706.nic	chr16	-	1984	23	ISM	ENSG00000140694.17	ENST00000437198.7	3071	24	-54	11256	-15	0	5prime_fragment	FALSE	canonical	1	107	junction_20	54.6837073655369	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCCTCTCAGAGGGAAGG	NA	False	NA	NA	False	NA	NA	NA	14630314	14446956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_14447082_14482637_14482828_14552020_14552096_14554064_14554152_14555653_14555710_14580873_14580944_14582180_14582292_14584346_14584423_14584748_14584792_14586317_14586362_14593300_14593379_14599903_14599961_14604145_14604227_14606483_14606527_14608280_14608320_14609057_14609124_14610643_14610810_14617589_14617651_14627105_14627188_14627268_14627337_14628171_14628252_14629596_14629675_14630106
transcript_72707.known	chr16	-	2879	23	FSM	ENSG00000140694.17	ENST00000651049.1	2879	23	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	82.8788446623261	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGTTTCTGATGCTTTAA	-14629720	True	NA	NA	False	AATAAA	-15	NA	14630208	14460708	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_14461835_14482637_14482828_14552020_14552096_14554064_14554152_14555653_14555710_14580873_14580944_14582180_14582292_14584346_14584423_14584748_14584792_14586317_14586362_14593300_14593379_14599903_14599961_14604145_14604227_14606483_14606527_14608280_14608320_14609057_14609124_14610643_14610810_14617589_14617651_14627105_14627188_14627268_14627337_14628171_14628252_14629596_14629675_14630106
transcript_7271.nnic	chr1	-	3365	5	NNC	ENSG00000163909.8	novel	4077	5	NA	NA	6628	-718	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	6.21992765231236	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAGTAGATTCTACTTC	-39632973	False	269	-26	True	AATAAA	-24	NA	39633015	39624152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_39627181_39630226_39630309_39631495_39631580_39632648_39632716_39632911
transcript_72721.known	chr16	+	2903	8	FSM	ENSG00000103429.11	ENST00000261658.7	2903	8	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_6	50.059556367126	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGTAGAGAAAAAGCAATT	14628271	True	NA	19	True	AATAAA	-30	NA	14632950	14669236	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_14633019_14644273_14644610_14648387_14648593_14649803_14649974_14655065_14655211_14661891_14662066_14664868_14665072_14667634
transcript_72727.known	chr16	+	1414	4	FSM	ENSG00000103429.11	ENST00000562442.5	1414	4	0	0	0	0	multi-exon	TRUE	canonical	3	210	junction_2	22.6274169979695	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGGTATTTTGTGTCTG	14628252	True	NA	24	True	TATAAA	-14	NA	14632931	14650589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_14633019_14644273_14644610_14648387_14648593_14649803
transcript_72730.known	chr16	+	1177	3	FSM	ENSG00000103429.11	ENST00000566520.5	1177	3	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_2	121.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGGACGTTTGATATAAA	14628251	True	NA	-9	True	NA	NA	NA	14632930	14650556	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_14633019_14644273_14644610_14649803
transcript_72731.known	chr16	-	636	4	FSM	ENSG00000069764.10	ENST00000438167.8	636	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	1.24721912892465	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGCATTCAGTTATTTG	NA	False	NA	NA	False	AATAAA	-20	NA	14694308	14672547	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_14672750_14688164_14688272_14690494_14690646_14694132
transcript_72732.nnic	chr16	+	1521	8	NNC	ENSG00000254852.8	novel	954	7	NA	NA	386	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	81.6593221742575	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGAATAAATAAATAATA	NA	False	NA	NA	False	AAGAAA	-5	NA	14751198	14765413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_14751730_14755191_14755321_14758946_14759047_14759209_14759355_14762311_14762420_14763437_14763499_14763607_14763644_14765002
transcript_72733.known	chr16	-	706	2	FSM	ENSG00000255277.3	ENST00000542005.2	706	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGAGCCTTTCTGCTC	NA	False	NA	NA	False	AATAAA	-13	NA	14824702	14822431	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_14823069_14824633
transcript_72737.known	chr16	+	4312	31	FSM	ENSG00000103512.16	ENST00000287667.12	4312	31	0	0	0	0	multi-exon	TRUE	canonical	3	744	junction_11	167.347359969881	581	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAGATGTATTTCTTGGA	NA	False	NA	22	True	AATAAA	-29	NA	14833720	14896157	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_14834017_14838406_14838497_14841361_14841408_14844673_14844775_14846576_14846684_14848898_14848972_14852429_14852583_14853466_14853605_14853936_14854027_14857216_14857323_14857504_14857656_14863012_14863188_14864584_14864727_14865023_14865156_14866554_14866692_14868547_14868636_14871620_14871685_14872233_14872330_14875035_14875255_14875339_14875423_14876358_14876519_14876663_14876791_14878720_14878835_14880014_14880143_14881543_14881686_14882593_14882678_14884371_14884483_14886760_14886863_14889095_14889216_14894997_14895091_14895513
transcript_72762.known	chr16	+	4598	23	FSM	ENSG00000179889.20	ENST00000396410.9	4598	23	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_4	48.2281938049306	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGGCCTGAATTAGTAAGA	14975000	False	NA	NA	False	AATAAA	-17	NA	14975025	15038332	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_14975221_14997752_14997827_14998339_14998406_15001775_15001857_15004186_15004334_15006393_15006584_15008778_15008848_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703_15022755_15026642_15026707_15028877_15028967_15029950_15030057_15031734_15031907_15032860_15032980_15033277_15033400_15034285_15034379_15034456_15034554_15035448_15035554_15036015
transcript_72771.known	chr16	+	2683	22	FSM	ENSG00000179889.20	ENST00000627450.2	2683	22	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	124.697457000185	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGCCCGTGGCAACTTTT	14969526	True	NA	NA	False	NA	NA	NA	14975128	15036604	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_14975221_14997752_14997827_14998342_14998406_15004186_15004334_15006393_15006584_15008778_15008848_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703_15022755_15026642_15026707_15028877_15028967_15029950_15030057_15031734_15031907_15032860_15032980_15033277_15033400_15034285_15034379_15034456_15034554_15035448_15035554_15036015
transcript_72781.known	chr16	+	2048	17	FSM	ENSG00000179889.20	ENST00000535621.6	2048	17	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_16	118.419738114049	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCGACCTAACTCCATCTAA	14974986	False	NA	NA	False	AATAAA	-41	NA	14975011	15139339	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_14975221_14997752_14997827_14998339_14998406_15001775_15001857_15004186_15004334_15006393_15006584_15008778_15008848_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703_15022755_15026642_15026707_15028877_15028967_15029950_15030057_15138878
transcript_72793.known	chr16	+	2183	14	FSM	ENSG00000179889.20	ENST00000455313.6	2183	14	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	128.778972152441	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGCTCTAAGTAATCAGAC	14969477	True	NA	NA	False	CATAAA	-19	NA	14975079	15029805	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_14975221_14997752_14997827_14998339_14998406_15001775_15001857_15004186_15004334_15006393_15006584_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703_15022755_15026642_15026707_15028877
transcript_72796.known	chr16	+	884	9	FSM	ENSG00000179889.20	ENST00000562119.5	884	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	164.877037515841	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGAGGCCTTCCAGAAAGG	14969486	True	NA	NA	False	GGGGCT	-25	NA	14975088	15036197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_14975221_14997752_14997827_14998339_14998406_15001775_15001789_15033277_15033400_15034285_15034379_15034456_15034554_15035448_15035554_15036015
transcript_72798.known	chr16	+	283	3	FSM	ENSG00000179889.20	ENST00000566426.1	283	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	269	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCTCATATCCGGAGAT	14975005	False	NA	NA	False	TTTAAA	-28	NA	14975030	14998362	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_14975221_14997756_14997827_14998339
transcript_72804.known	chr16	-	1210	10	FSM	ENSG00000157045.9	ENST00000287706.8	1210	10	0	0	0	0	multi-exon	FALSE	canonical	3	536	junction_9	107.490338354227	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATTTGTTGAGACTTATT	NA	False	NA	-13	True	AATAAA	-17	NA	15056074	15037856	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_15038211_15038573_15038688_15039968_15040067_15041067_15041122_15041622_15041677_15044333_15044408_15047441_15047551_15047854_15047921_15047996_15048100_15055890
transcript_72808.known	chr16	-	1043	9	FSM	ENSG00000157045.9	ENST00000565187.5	1043	9	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_8	238.169057604047	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTATTTTGGCAAAGGC	-15054947	True	NA	-30	True	NA	NA	NA	15056027	15037873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_15038211_15038573_15038688_15039968_15040067_15041067_15041122_15041622_15041677_15044333_15044408_15047441_15047551_15047854_15047921_15055890
transcript_7281.known	chr1	+	1198	11	FSM	ENSG00000084072.17	ENST00000372830.5	1198	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_10	335.512443882489	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTCTCATAAAGCCCAT	39734502	True	NA	10	True	AATAAA	-18	NA	39738900	39763914	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_39738932_39740164_39740264_39741365_39741410_39741894_39741922_39743215_39743298_39743823_39743925_39745374_39745499_39748902_39749089_39752909_39753053_39762516_39762652_39763688
transcript_72811.known	chr16	-	1049	8	FSM	ENSG00000157045.9	ENST00000622833.4	1049	8	0	0	0	0	multi-exon	FALSE	canonical	2	76	junction_7	266.584596214364	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTGAGACTTATTTTT	NA	False	NA	-10	True	AATAAA	-20	NA	15056079	15037853	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_15038211_15038573_15038688_15039968_15040067_15041067_15041122_15041622_15041677_15044333_15044408_15047441_15047551_15055890
transcript_72812.nnic	chr16	-	930	7	NIC	ENSG00000157045.9	novel	1210	10	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	63	junction_6	292.608384477729	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATTTGTTGAGACTTATT	NA	False	NA	-13	True	AATAAA	-17	NA	15056072	15037856	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_15038211_15038573_15038688_15039968_15040067_15041067_15041122_15041622_15041677_15044333_15044408_15055890
transcript_72815.known	chr16	-	3706	18	FSM	ENSG00000085721.13	ENST00000198767.11	3706	18	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_6	37.6545948339738	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTTTCAATTTCTGTTT	-15093760	True	NA	-22	True	AATAAA	-16	NA	15094272	15060032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_15061906_15063195_15063284_15065218_15065372_15068168_15068278_15070069_15070255_15071120_15071252_15072949_15073081_15074722_15074862_15076557_15076651_15079997_15080097_15083512_15083583_15084641_15084706_15085638_15085699_15086128_15086259_15086364_15086455_15091314_15091372_15092508_15092615_15094144
transcript_72817.known	chr16	-	2198	17	FSM	ENSG00000085721.13	ENST00000429751.6	2198	17	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_14	65.196817406987	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTCTAATATAGGCAGCA	-15093737	True	NA	NA	False	NA	NA	NA	15094249	15061427	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_15061906_15063195_15063284_15065218_15065372_15068168_15068278_15070069_15070255_15071120_15071252_15072949_15073081_15074722_15074862_15076557_15076651_15079997_15080097_15083512_15083583_15084641_15084706_15085638_15085699_15086128_15086259_15091314_15091372_15092508_15092615_15094144
transcript_72821.known	chr16	-	2493	8	FSM	ENSG00000250251.6	ENST00000424133.2	2493	8	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_7	60.4621656028607	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATCCCACAAAGAAAAGCT	-15131489	False	NA	NA	False	NA	NA	NA	15131499	15126658	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_15127597_15127686_15127898_15127991_15128136_15128221_15128390_15129881_15130078_15130201_15130455_15130634_15130792_15131073
transcript_72824.known	chr16	+	5894	4	FSM	ENSG00000156968.9	ENST00000396385.4	5894	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	5.71547606649408	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAAAAAGTTTCTTTTAAT	NA	False	NA	NA	False	ATTAAA	-25	NA	15395753	15413271	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_15396208_15400786_15400858_15407823_15407854_15407932
transcript_72828.known	chr16	+	5820	3	FSM	ENSG00000156968.9	ENST00000287594.7	5820	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	10	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGAAAAAGTTTCTTTT	NA	False	NA	NA	False	ATTAAA	-22	NA	15395753	15413268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_15396208_15407823_15407854_15407932
transcript_72831.known	chr16	+	2111	6	FSM	ENSG00000166780.11	ENST00000300006.9	2111	6	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_5	17.91758912354	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAATGTCTGTTTAGTAA	NA	False	NA	9	True	ATTAAA	-37	NA	15434587	15588259	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_15434760_15515304_15515429_15567982_15568057_15581216_15581332_15583155_15583239_15586716
transcript_72836.known	chr16	+	546	4	FSM	ENSG00000166780.11	ENST00000567550.1	546	4	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_3	12.7279220613579	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCCATCTTCTGCTCCT	NA	False	NA	NA	False	NA	NA	NA	15434587	15581392	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_15434760_15515304_15515429_15567982_15568057_15581216
transcript_72838.known	chr16	+	1854	5	FSM	ENSG00000166780.11	ENST00000566490.5	1854	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	58.636059724371	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTACTTTTTTTCTTGA	NA	False	NA	21	True	AATAAA	-31	NA	15434474	15587972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_15434760_15515304_15515429_15567982_15568057_15581216_15581332_15586716
transcript_72841.known	chr16	-	5891	27	FSM	ENSG00000166783.22	ENST00000548025.5	5891	27	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_23	15.2813844287477	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGAGTGTATTTTCAGGTT	-15641257	True	NA	NA	False	NA	NA	NA	15643108	15596170	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_15596938_15598853_15599025_15600427_15600554_15600640_15600702_15601990_15602204_15604167_15604399_15608290_15608519_15609522_15609726_15610974_15611109_15611591_15611735_15612556_15612778_15615829_15616006_15617051_15617172_15617298_15617536_15620450_15620532_15621732_15621912_15622933_15623124_15624768_15624928_15625015_15625174_15625371_15625801_15630331_15630505_15631380_15631499_15633616_15633835_15634756_15634932_15635655_15636343_15639089_15639292_15643017
transcript_72849.nic	chr16	-	2135	8	ISM	ENSG00000166783.22	ENST00000551742.5	5900	27	-58	29223	-12	-3901	5prime_fragment	FALSE	canonical	2	9	junction_1	11.2304251468763	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAATGTTAAAAGTTTAC	NA	False	NA	NA	False	NA	NA	NA	15643166	15625393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_15625798_15630331_15630505_15631380_15631499_15633616_15633844_15634756_15634932_15635655_15636343_15639089_15639292_15643017
transcript_72852.nic	chr16	-	2138	8	ISM	ENSG00000166783.22	ENST00000396368.8	7730	27	-12	31007	-12	-3901	5prime_fragment	FALSE	canonical	3	25	junction_1	7.18842607166236	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAATGTTAAAAGTTTAC	NA	False	NA	NA	False	NA	NA	NA	15643166	15625393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_15625801_15630331_15630505_15631380_15631499_15633616_15633844_15634756_15634932_15635655_15636343_15639089_15639292_15643017
transcript_7286.known	chr1	+	4339	10	FSM	ENSG00000084072.17	ENST00000324379.10	4339	10	0	0	0	0	multi-exon	TRUE	canonical	3	685	junction_1	75.3103865412179	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTGTTTATTTGACTTG	39734483	True	NA	NA	False	AATAAA	-17	NA	39738881	39756769	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_39738932_39740164_39740264_39741365_39741410_39741894_39741922_39743215_39743298_39743823_39743925_39745374_39745499_39748902_39749089_39752909_39753053_39753286
transcript_72863.known	chr16	+	3203	9	FSM	ENSG00000072864.16	ENST00000396354.6	3203	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_8	11.0227038425243	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAAGGGTTTTTTTTCTTTT	15648472	True	NA	18	True	AATAAA	-20	NA	15650244	15726353	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_15650295_15664735_15664862_15667285_15667440_15677800_15677950_15687374_15687512_15691143_15691324_15694164_15694257_15696708_15696861_15724190
transcript_72864.known	chr16	-	646	6	FSM	ENSG00000133393.13	ENST00000573429.5	646	6	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_4	276.219477951863	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCTTAAAATTGTATTAT	-15883703	True	NA	NA	False	NA	NA	NA	15888614	15867419	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_15867517_15873490_15873628_15879803_15879889_15882948_15883021_15884007_15884206_15888557
transcript_72868.known	chr16	-	2264	5	FSM	ENSG00000133393.13	ENST00000255759.11	2264	5	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_4	61.7353221421902	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTGCAAAGGGTGTTC	-15883692	True	NA	-9	True	AATAAA	-17	NA	15888603	15865718	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_15867517_15873490_15873628_15879803_15879889_15884007_15884206_15888557
transcript_7287.known	chr1	+	1079	10	FSM	ENSG00000084072.17	ENST00000356511.6	1079	10	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_9	265.511851354844	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTCTCATAAAGCCCAT	39734486	True	NA	10	True	AATAAA	-18	NA	39738884	39763914	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_39738932_39740164_39740264_39741365_39741410_39741894_39741922_39743215_39743298_39743823_39743925_39745374_39745499_39748902_39749089_39752909_39753053_39763688
transcript_72871.known	chr16	-	565	4	FSM	ENSG00000133393.13	ENST00000575744.5	565	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	275.918264870032	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTTTTGAGATGGA	-15883692	True	NA	35	True	AAAAAG	-21	NA	15888603	15867219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_15867517_15873490_15873628_15879803_15879889_15888557
transcript_72872.known	chr16	-	851	4	FSM	ENSG00000133393.13	ENST00000573087.5	851	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	273.126751202115	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGGAGTAGTTTTTGTATT	-15883714	True	NA	NA	False	AAAACA	-16	NA	15888625	15867068	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_15867517_15873490_15873628_15884007_15884206_15888557
transcript_72873.known	chr16	-	530	4	FSM	ENSG00000133393.13	ENST00000575073.5	530	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	222.873656286845	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGAGTTTCTACAAAACAC	-15883714	True	NA	-83	True	NA	NA	NA	15888625	15867337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_15867517_15879803_15879889_15884007_15884206_15888557
transcript_72876.known	chr16	-	2039	3	FSM	ENSG00000133393.13	ENST00000573968.5	2039	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	244	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTGGTGCAAAGGGTGT	-15883691	True	NA	-11	True	AATAAA	-15	NA	15888602	15865720	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_15867517_15884007_15884206_15888557
transcript_72879.known	chr16	-	796	6	FSM	ENSG00000133393.13	ENST00000572415.5	796	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	275.967679266975	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTACATTTGTGAATAAAA	-15883712	True	NA	-52	True	AAAACA	-13	NA	15888623	15867306	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_15867517_15873490_15873628_15879803_15879889_15882948_15883049_15884007_15884206_15888557
transcript_7288.known	chr1	+	1213	10	FSM	ENSG00000084072.17	ENST00000475350.5	1213	10	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	320.287370965513	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGGGAGTTGTCAGAG	39734509	True	NA	32	True	AATAAA	-30	NA	39738907	39753716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_39738924_39740164_39740264_39741365_39741410_39741894_39741922_39743215_39743298_39743823_39743925_39745413_39745499_39748902_39749089_39752909_39753053_39753286
transcript_72880.known	chr16	+	6504	31	FSM	ENSG00000103222.20	ENST00000399410.8	6504	31	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_4	38.0356703927014	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTATTTCTTTCTAA	15949450	True	NA	15	True	AGTAAA	-19	NA	15949615	16143053	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_15949800_16007815_16007993_16009775_16009902_16014490_16014629_16016495_16016622_16033108_16033171_16036471_16036604_16044449_16044681_16045835_16046014_16048141_16048304_16052723_16052817_16056091_16056296_16068155_16068303_16071641_16071730_16076325_16076402_16079351_16079479_16083365_16083543_16086823_16086992_16090404_16090589_16102626_16102718_16106737_16106874_16111374_16111583_16114765_16115077_16121974_16122175_16124788_16124916_16125809_16125912_16131788_16131936_16134349_16134509_16136477_16136645_16138363_16138559_16141172
transcript_729.nnic	chr1	-	3141	16	NNC	ENSG00000107404.21	novel	3305	15	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	41.2883626326946	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGATGTGTGGCCTGTGCC	-1347645	True	NA	-4	True	AAAAAG	-17	NA	1349422	1335278	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_1336516_1337976_1338184_1338268_1338437_1338521_1338654_1339286_1339440_1339581_1339650_1339735_1339813_1340037_1340178_1340246_1340317_1340409_1340504_1341666_1341806_1342052_1342157_1342362_1342485_1342688_1342759_1348895_1349070_1349236
transcript_72902.known	chr16	-	714	2	FSM	ENSG00000091262.17	ENST00000575728.1	714	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCTGCTCATCCATCC	NA	False	NA	NA	False	AATAAA	-21	NA	16223467	16221186	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_16221832_16223398
transcript_72906.known	chr16	+	4320	31	FSM	ENSG00000103226.19	ENST00000399336.9	4320	31	0	0	0	0	multi-exon	TRUE	canonical	3	75	junction_12	316.252704863268	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAGATGTATTTCTTGGA	NA	False	NA	NA	False	AATAAA	-29	NA	16232527	16294811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_16232832_16236900_16236991_16239850_16239897_16243160_16243262_16245067_16245175_16247394_16247468_16250927_16251081_16251962_16252101_16252432_16252523_16255719_16255826_16256007_16256159_16261501_16261677_16263073_16263216_16263512_16263645_16265042_16265180_16267043_16267132_16270120_16270185_16270732_16270829_16273688_16273908_16273992_16274076_16275011_16275172_16275316_16275444_16277369_16277484_16278661_16278790_16280188_16280331_16281238_16281323_16283015_16283127_16285404_16285507_16287742_16287863_16293651_16293745_16294167
transcript_72914.known	chr16	+	3757	23	FSM	ENSG00000103226.19	ENST00000574894.2	3757	23	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_12	344.093926370823	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAGGCCCTGTCTCAGAA	NA	False	NA	NA	False	NA	NA	NA	16232554	16278371	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_16232832_16236900_16236991_16239850_16239897_16243160_16243262_16245067_16245175_16247394_16247468_16250927_16251081_16251962_16252101_16252432_16252523_16255719_16255826_16256007_16256159_16261501_16261677_16263073_16263216_16263512_16263645_16265042_16265180_16267043_16267132_16270120_16270185_16270732_16270829_16273688_16273908_16273992_16274076_16275011_16275172_16275316_16275444_16277369
transcript_72934.known	chr16	-	3921	32	FSM	ENSG00000185164.15	ENST00000621364.4	3921	32	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_1	288.792336338026	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATAGATGTATTTCTTGG	-18554173	True	NA	NA	False	AATAAA	-28	NA	18562112	18499924	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_18500109_18500439_18500568_18500990_18501084_18506872_18506993_18509165_18509268_18511545_18511657_18513349_18513434_18514341_18514484_18515882_18516011_18517188_18517303_18519228_18519356_18519500_18519661_18520596_18520680_18520764_18520984_18523843_18523940_18524488_18524553_18527536_18527625_18529500_18529638_18531036_18531169_18531465_18531608_18533004_18533180_18538525_18538677_18538858_18538965_18542171_18542262_18542593_18542732_18543616_18543770_18547227_18547301_18549520_18549628_18551438_18551540_18554806_18554853_18557701_18557792_18561875
transcript_7294.known	chr1	-	5051	11	FSM	ENSG00000043514.17	ENST00000316891.10	5051	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	42.6234677143941	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAGAGACTCAACAATAC	-39880751	True	NA	NA	False	NA	NA	NA	39883504	39838109	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_39841914_39844100_39844219_39844530_39844641_39847219_39847298_39847547_39847661_39847985_39848098_39850118_39850262_39852730_39852877_39853969_39854069_39857276_39857418_39883317
transcript_72942.known	chr16	-	4235	31	FSM	ENSG00000185164.15	ENST00000622306.5	4235	31	0	0	0	0	multi-exon	FALSE	canonical	3	495	junction_20	235.724471929977	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCATAGATGTATTTCTT	-18554158	True	NA	NA	False	AATAAA	-26	NA	18562097	18499926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_18500568_18500990_18501084_18506872_18506993_18509165_18509268_18511545_18511657_18513349_18513434_18514341_18514484_18515882_18516011_18517188_18517303_18519228_18519356_18519500_18519661_18520596_18520680_18520764_18520984_18523843_18523940_18524488_18524553_18527536_18527625_18529500_18529638_18531036_18531169_18531465_18531608_18533004_18533180_18538525_18538677_18538858_18538965_18542171_18542262_18542593_18542732_18543616_18543770_18547227_18547301_18549520_18549628_18551438_18551540_18554806_18554853_18557701_18557792_18561875
transcript_7295.nnic	chr1	-	2224	11	NNC	ENSG00000043514.17	novel	5051	11	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	54.6281978468996	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCTTTGATCCTTAAAAA	-39880790	True	NA	-24	True	AATAAA	-17	NA	39883543	39841050	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_39841914_39844100_39844219_39844530_39844641_39847219_39847298_39847547_39847661_39847985_39848098_39850118_39850262_39852730_39852952_39853969_39854069_39857276_39857418_39883317
transcript_72964.known	chr16	+	796	2	FSM	ENSG00000256340.9	ENST00000565118.2	813	2	0	17	0	-17	multi-exon	FALSE	canonical	3	20	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCTGCTCATCCATCC	NA	False	NA	NA	False	AATAAA	-21	NA	18571161	18573522	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_18571312_18572876
transcript_72969.known	chr16	-	589	6	FSM	ENSG00000134419.15	ENST00000576008.5	589	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	5943.75957118052	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGCTTCCACTTGGTC	-18727114	True	NA	-33	True	AATAAA	-14	NA	18790362	18782967	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_18783103_18784737_18784824_18786239_18786337_18788062_18788143_18788980_18789119_18790309
transcript_72973.known	chr16	-	2278	6	FSM	ENSG00000170540.15	ENST00000304414.12	2278	6	0	0	0	0	multi-exon	FALSE	canonical	3	2796	junction_3	105.286276408656	2935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCTCACTTTCTTTATA	-18748510	True	NA	-6	True	AATAAA	-16	NA	18801549	18791668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_18793371_18794598_18794684_18795463_18795582_18797924_18798045_18798700_18798835_18801430
transcript_72976.known	chr16	-	802	5	FSM	ENSG00000134419.15	ENST00000565420.5	802	5	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_4	6031.56039097678	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTGCTTCCACTTGGT	-18727012	True	NA	-34	True	AATAAA	-13	NA	18790260	18782968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_18783103_18784737_18784824_18788062_18788143_18788980_18789119_18789896
transcript_72977.known	chr16	-	2203	5	FSM	ENSG00000134419.15	ENST00000322989.8	2203	5	0	0	0	0	multi-exon	FALSE	canonical	3	1451	junction_4	5500.24128448016	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATTTGTTGTCACCATT	-18727086	True	NA	-4	True	AATAAA	-18	NA	18790334	18781294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_18783103_18784737_18784824_18788062_18788143_18788980_18789119_18790243
transcript_72978.known	chr16	-	481	5	FSM	ENSG00000134419.15	ENST00000569365.6	481	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	5708.00862823454	1437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGCTTCCACTTGGTC	-18727086	True	NA	-33	True	AATAAA	-14	NA	18790334	18782967	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_18783103_18784737_18784824_18788062_18788160_18788980_18789119_18790309
transcript_72981.known	chr16	-	418	4	FSM	ENSG00000134419.15	ENST00000574723.5	418	4	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_2	5222.86168898069	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCACTTGGTCGTTTTG	-18727114	True	NA	-27	True	AATAAA	-20	NA	18790362	18782961	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_18783103_18784737_18784824_18788980_18789119_18790309
transcript_72984.known	chr16	-	778	4	FSM	ENSG00000170540.15	ENST00000569976.5	778	4	0	0	0	0	multi-exon	FALSE	canonical	3	2796	junction_1	131.251243380354	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATGCCTATAATCCCAGC	-18748509	True	NA	NA	False	AGTAAA	-44	NA	18801548	18795175	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_18795582_18797924_18798045_18798700_18798835_18801430
transcript_72988.known	chr16	-	606	2	FSM	ENSG00000134419.15	ENST00000573554.1	606	2	0	0	0	0	multi-exon	FALSE	canonical	3	6711	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCCAGCCTGGGCGACAG	-18727092	True	NA	NA	False	NA	NA	NA	18790340	18788543	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_18789119_18790309
transcript_72995.known	chr16	-	16062	63	FSM	ENSG00000157106.18	ENST00000446231.7	16062	63	0	0	0	0	multi-exon	TRUE	canonical	1	16	junction_12	24.5350998332867	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGCATTTAAGTTCTGAA	-18920689	True	NA	-7	True	AATAAA	-18	NA	18926408	18804859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_18809647_18811760_18811868_18811947_18812128_18815174_18815282_18815439_18815652_18816301_18816530_18817290_18817471_18819501_18819655_18828030_18828169_18829285_18829756_18829925_18830116_18830218_18830370_18832939_18833167_18834203_18834439_18834891_18835165_18835932_18836213_18836359_18836533_18837252_18837444_18838013_18838233_18838356_18838467_18838550_18838690_18839697_18839947_18841564_18841795_18842207_18842455_18845428_18845652_18847452_18847608_18847815_18848034_18849216_18849379_18849948_18850127_18850236_18850468_18852066_18852206_18852317_18852463_18853582_18853868_18854655_18854905_18858169_18858291_18859021_18859182_18859555_18859704_18860666_18860777_18863649_18863852_18864001_18864145_18866620_18866776_18868189_18868355_18868522_18868720_18869103_18869304_18869853_18869995_18870609_18870712_18870800_18870889_18871363_18871483_18872183_18872346_18872493_18872625_18876123_18876394_18877130_18877233_18879494_18879720_18882164_18882339_18884069_18884168_18885089_18885163_18885540_18885667_18889371_18889586_18890862_18890922_18892217_18892355_18896051_18896208_18896792_18896957_18925949
transcript_72997.known	chr16	+	4401	16	FSM	ENSG00000170537.13	ENST00000304381.10	4401	16	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_7	4.16333199893227	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATCGTGTATACTGGAA	18983400	True	NA	7	True	ATTAAA	-23	NA	18983933	19063942	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_18984131_19009171_19009416_19016449_19016599_19021628_19021797_19023112_19023196_19030223_19030370_19035675_19035824_19037873_19038048_19040288_19040447_19044883_19045002_19045340_19045439_19047062_19047250_19051685_19051817_19056541_19056698_19059415_19059495_19061777
transcript_7300.nic	chr1	-	2003	10	NIC	ENSG00000043514.17	novel	5051	11	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	53.5691545666688	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCTTTGATCCTTAAAAA	-39880790	True	NA	-24	True	AATAAA	-17	NA	39883543	39841050	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_39841914_39844100_39844219_39844530_39844641_39847219_39847298_39847547_39847661_39847985_39848098_39850118_39850262_39853969_39854069_39857276_39857418_39883317
transcript_7301.known	chr1	-	2034	10	FSM	ENSG00000043514.17	ENST00000372818.5	2034	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	55.4699340205747	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCTTTGATCCTTAAAAA	-39880753	True	NA	-24	True	AATAAA	-17	NA	39883506	39841050	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_39841914_39844100_39844219_39844530_39844641_39847547_39847661_39847985_39848098_39850118_39850262_39852730_39852877_39853969_39854069_39857276_39857418_39883317
transcript_73010.known	chr16	+	2642	6	FSM	ENSG00000167186.11	ENST00000321998.10	2642	6	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	14.319217855735	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACTGATCTGCTCTTTAA	19066895	True	NA	6	True	AATAAA	-22	NA	19067613	19080095	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_19067738_19071927_19072107_19073920_19074036_19075720_19075861_19077305_19077375_19078080
transcript_73015.known	chr16	+	2575	6	FSM	ENSG00000167186.11	ENST00000569127.1	2575	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	33.5583074662594	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGACTGTGGTATTTTGT	19067897	False	NA	14	True	AATAAA	-21	NA	19067988	19079262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_19068879_19071927_19072107_19073920_19074036_19075720_19075861_19077305_19077375_19078080
transcript_73017.known	chr16	+	819	6	FSM	ENSG00000167186.11	ENST00000544894.6	819	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	36.5874295352926	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCAGTGTTGATTTTTC	19067825	True	NA	25	True	AATAAA	-29	NA	19067916	19078304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_19068009_19071927_19072107_19073920_19074036_19075720_19075861_19077305_19077375_19078080
transcript_7302.known	chr1	-	1851	9	FSM	ENSG00000043514.17	ENST00000441669.6	1851	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	57.8332732948776	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCTTTGATCCTTAAAAA	-39880738	True	NA	-24	True	AATAAA	-17	NA	39883491	39841050	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_39841914_39844100_39844219_39844530_39844641_39847219_39847298_39847547_39847661_39847985_39848092_39850118_39850262_39852730_39852877_39883317
transcript_73020.known	chr16	+	703	5	FSM	ENSG00000167186.11	ENST00000566049.5	703	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	30.2737510064412	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTTTTTTTTTTTAA	19066907	True	NA	4	True	AATAAA	-8	NA	19067625	19078283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_19067738_19071927_19072107_19075720_19075861_19077305_19077375_19078080
transcript_73022.known	chr16	+	3088	8	FSM	ENSG00000103528.17	ENST00000355377.7	3088	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	10.3490115864428	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCGAGTTATCTTTTTCT	19167830	True	NA	17	True	ATTAAA	-21	NA	19168239	19268332	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_19168662_19172759_19172778_19173429_19173579_19180390_19180540_19183527_19184148_19223044_19223166_19224682_19224839_19266879
transcript_73024.known	chr16	+	1721	7	FSM	ENSG00000103528.17	ENST00000568115.5	1721	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	18.9802528961023	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTTGTGTGTCTGGTTG	19167850	True	NA	3	True	AATAAA	-15	NA	19168259	19250078	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_19168662_19173443_19173579_19180390_19180540_19183527_19184148_19223044_19223166_19224682_19224839_19249940
transcript_73025.nic	chr16	+	499	2	ISM	ENSG00000103534.17	ENST00000541464.5	3581	21	-36	67500	7	0	5prime_fragment	FALSE	canonical	2	4	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTTTCATACAGCTGA	NA	False	NA	NA	False	NA	NA	NA	19410502	19430640	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_19410774_19430412
transcript_73028.known	chr16	-	2238	6	FSM	ENSG00000006007.12	ENST00000564172.1	2238	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_5	80.1947629212781	208	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGATAACTAGAAC	-19515480	True	NA	NA	False	NA	NA	NA	19522123	19502382	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_19503618_19504880_19505093_19507686_19507780_19510838_19510945_19517013_19517186_19521703
transcript_73033.known	chr16	+	5446	15	FSM	ENSG00000103540.16	ENST00000381396.9	5446	15	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_13	23.6293660256789	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTTTGATTGTTTTTAT	NA	False	NA	NA	False	AATAAA	-20	NA	19523856	19553408	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_19524089_19527866_19528023_19532415_19532545_19535939_19537588_19540656_19540788_19541886_19542065_19542620_19542761_19542877_19542995_19544796_19544899_19545093_19545211_19545816_19545891_19546411_19546475_19547954_19548015_19548514_19548601_19551195
transcript_73034.known	chr16	+	5549	15	FSM	ENSG00000103540.16	ENST00000396212.6	5549	15	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	29.227555491351	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTTTGATTGTTTTTAT	NA	False	NA	NA	False	AATAAA	-20	NA	19523810	19553408	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_19524089_19525718_19525862_19527866_19528023_19532415_19532545_19535939_19537588_19540656_19540788_19541886_19542065_19542620_19542761_19542877_19542995_19544796_19544899_19545093_19545211_19545816_19545891_19546411_19546475_19547954_19548015_19551195
transcript_7304.known	chr1	-	983	9	FSM	ENSG00000043514.17	ENST00000492612.6	983	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	54.9919028130506	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAGATGCCATACAATG	-39880728	True	NA	NA	False	NA	NA	NA	39883481	39844195	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_39844219_39844530_39844641_39847219_39847298_39847547_39847661_39847985_39848098_39850118_39850262_39853969_39854069_39857276_39857418_39883317
transcript_7305.known	chr1	-	1156	8	FSM	ENSG00000043514.17	ENST00000495175.6	1156	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	40.2380670611341	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCCACCATTTTCTTTTG	-39880758	True	NA	NA	False	NA	NA	NA	39883511	39841625	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_39841914_39844100_39844219_39844530_39844641_39847219_39847298_39847547_39847661_39847985_39848098_39850118_39850262_39883317
transcript_73054.nic	chr16	+	1748	9	ISM	ENSG00000174628.16	ENST00000320394.10	3482	10	1783	1103	-40	-175	3prime_fragment	FALSE	canonical	3	15	junction_4	8.49632273398321	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTACAGCCTTTTAAATTT	19718209	False	NA	4	True	AATAAA	-16	NA	19718238	19857364	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_19718488_19730429_19730495_19733697_19733828_19735352_19735451_19763847_19763901_19764034_19764113_19788837_19788923_19827025_19827138_19856486
transcript_73059.known	chr16	+	920	8	FSM	ENSG00000174628.16	ENST00000564955.5	920	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	10.8289106618556	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGACTTGGAACATGTGC	19717719	True	NA	NA	False	NA	NA	NA	19718278	19856641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_19718488_19733697_19733828_19735352_19735451_19763847_19763901_19764034_19764113_19788837_19788923_19827025_19827138_19856486
transcript_73063.known	chr16	+	1915	7	FSM	ENSG00000174628.16	ENST00000568300.6	1915	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	12.4688500761787	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCCTTAGCTCTTCATC	19717723	True	NA	5	True	AATAAA	-20	NA	19718282	19857539	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_19718488_19730429_19730495_19733697_19733828_19763847_19764113_19788837_19788923_19827025_19827138_19856486
transcript_73068.nnic	chr16	-	488	2	NNC	ENSG00000103550.14	novel	1020	2	NA	NA	-45	-25	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	0	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGTGTCAGCACCCTTT	-19704695	True	NA	NA	False	AAAAAG	-12	NA	19718176	19714823	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_19715038_19717902
transcript_73072.known	chr16	-	6422	5	FSM	ENSG00000103550.14	ENST00000219837.12	6422	5	0	0	0	0	multi-exon	FALSE	canonical	3	836	junction_4	105.411099984774	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGCTGTCTGAGTTTCTG	-19704746	True	NA	-7	True	AATAAA	-30	NA	19718227	19701936	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_19707222_19710508_19710587_19711371_19711441_19714117_19715038_19718157
transcript_73080.nic	chr16	-	955	2	ISM	ENSG00000103550.14	ENST00000565844.1	1394	4	-3	3904	-3	635	5prime_fragment	FALSE	canonical	3	836	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAGGAAAGAGAGTG	-19704757	True	NA	15	True	AAGAAA	-3	NA	19718238	19714163	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_19715038_19718157
transcript_73081.nic	chr16	-	1201	2	ISM	ENSG00000103550.14	ENST00000565844.1	1394	4	-300	3955	-300	584	5prime_fragment	FALSE	canonical	3	836	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGTAGAGCAGCCAGTCA	-19718519	False	NA	-36	True	AAAAAG	-15	NA	19718535	19714214	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_19715038_19718157
transcript_73083.nic	chr16	-	807	2	ISM	ENSG00000103550.14	ENST00000565844.1	1394	4	-4	4053	-4	486	5prime_fragment	FALSE	canonical	3	836	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGTAAAAAGAAGCCAGT	-19704758	True	NA	89	True	NA	NA	NA	19718239	19714312	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_19715038_19718157
transcript_73084.nic	chr16	-	1308	2	ISM	ENSG00000103550.14	ENST00000565844.1	1394	4	-576	4124	-576	415	5prime_fragment	FALSE	canonical	3	836	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACCAGGAGGGAGATGCC	-19718795	False	NA	18	True	AAGAAA	-8	NA	19718811	19714383	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_19715038_19718157
transcript_73086.nic	chr16	-	551	2	ISM	ENSG00000103550.14	ENST00000565844.1	1394	4	-4	4309	-4	230	5prime_fragment	FALSE	canonical	3	836	junction_1	0	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGCCCAGGACCCCACAG	-19704758	True	NA	NA	False	AAAACA	-16	NA	19718239	19714568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_19715038_19718157
transcript_73087.nic	chr16	-	659	2	ISM	ENSG00000103550.14	ENST00000565844.1	1394	4	-232	4429	-232	110	5prime_fragment	FALSE	canonical	3	836	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAAGTCACCTCTAGCCA	-19718413	True	NA	NA	False	AAGAAA	-3	NA	19718467	19714688	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_19715038_19718157
transcript_73088.known	chr16	-	1020	2	FSM	ENSG00000103550.14	ENST00000564480.1	1020	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCATGTAGAACCTGAGAC	-19704650	True	NA	NA	False	AAAAAG	-37	NA	19718131	19714798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_19715038_19717350
transcript_73089.nic	chr16	-	287	2	ISM	ENSG00000103550.14	ENST00000565844.1	1394	4	5	4564	-3	-25	5prime_fragment	FALSE	canonical	3	836	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGTGTCAGCACCCTTT	-19704749	True	NA	NA	False	AAAAAG	-12	NA	19718230	19714823	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_19715038_19718157
transcript_7310.known	chr1	-	545	4	FSM	ENSG00000043514.17	ENST00000541099.5	545	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	69.8442712197802	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGGATCCAGTTCAGGAG	-39880681	True	NA	NA	False	NA	NA	NA	39883434	39841713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_39841914_39844100_39844219_39844530_39844641_39883317
transcript_73104.known	chr16	-	5144	4	FSM	ENSG00000167191.12	ENST00000300571.7	5144	4	0	0	0	0	multi-exon	FALSE	canonical	3	956	junction_2	12.5698050899765	1815	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTATCTTGTACAGAAAAG	-19875698	True	NA	55	True	ATTAAA	-17	NA	19884848	19856690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_19860545_19861836_19861974_19871815_19872847_19884726
transcript_73110.known	chr16	+	2533	14	FSM	ENSG00000005187.12	ENST00000289416.10	2533	14	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	6.68655809603099	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACACTTGTGGTTCCTGAA	20763782	True	NA	NA	False	AATAAA	-17	NA	20764013	20797581	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_20764126_20769983_20770254_20775838_20776050_20777372_20777581_20780713_20780858_20780973_20781131_20781707_20781788_20784983_20785108_20786077_20786159_20790586_20790689_20792001_20792130_20792235_20792336_20796369_20796490_20796885
transcript_73113.known	chr16	-	4122	5	FSM	ENSG00000066654.14	ENST00000381337.6	4122	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	106.175267835782	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTTCTAATATTTTTT	NA	False	NA	-13	True	AATAAA	-16	NA	20742084	20733663	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_20736359_20736859_20737287_20737707_20737957_20738896_20739072_20741508
transcript_73115.known	chr16	-	1099	5	FSM	ENSG00000066654.14	ENST00000565248.1	1099	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	171.425457561005	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGCTAAACTGGAATCT	-20734902	True	NA	NA	False	NA	NA	NA	20741803	20737088	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_20737287_20737707_20737957_20738087_20738270_20738896_20739072_20741508
transcript_73118.known	chr16	-	4357	4	FSM	ENSG00000066654.14	ENST00000396083.7	4357	4	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_3	31.4430702487315	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTTCTAATATTTTTT	-20734917	True	NA	-13	True	AATAAA	-16	NA	20741818	20733663	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_20737287_20737707_20737957_20738896_20739072_20741508
transcript_7312.known	chr1	-	3256	3	FSM	ENSG00000116990.11	ENST00000397332.2	3256	3	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_2	27	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTGGGGGCAGCTTAT	-39901676	True	NA	-4	True	AATAAA	-17	NA	39902013	39895425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_39897971_39900938_39901444_39901807
transcript_73128.known	chr16	-	2903	10	FSM	ENSG00000196678.14	ENST00000563117.5	2903	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_9	24.7421268185694	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTTTTATAAGTTCTT	-20806655	False	NA	NA	False	NA	NA	NA	20806676	20797373	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_20799068_20799262_20799352_20799956_20800039_20800301_20800403_20801202_20801360_20802795_20802924_20803432_20803517_20803602_20803671_20805714_20805946_20806407
transcript_73131.nic	chr16	-	4188	9	ISM	ENSG00000196678.14	ENST00000563117.5	2903	10	211	-1034	4	0	intron_retention	FALSE	canonical	3	56	junction_1	16.3320046228257	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTATGCATTTGTATGT	-20805492	True	NA	-2	True	AATAAA	-21	NA	20806465	20796339	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_20799068_20799262_20799352_20799956_20800039_20800301_20800403_20801202_20801360_20802795_20802924_20803432_20803517_20803602_20803671_20805714
transcript_73132.known	chr16	-	3502	9	FSM	ENSG00000196678.14	ENST00000357967.9	3502	9	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_8	21.8288799529431	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTATGCATTTGTATGT	-20805499	True	NA	-2	True	AATAAA	-21	NA	20806472	20796339	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_20799068_20799262_20799352_20799956_20800039_20800301_20800403_20801202_20801360_20802795_20802924_20803432_20803517_20803602_20803671_20806407
transcript_73133.nic	chr16	-	3328	9	NIC	ENSG00000196678.14	novel	2646	9	NA	NA	4	0	intron_retention	FALSE	canonical	3	29	junction_1	22.7911715363647	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAGTTATGCATTTGT	-20805492	True	NA	-6	True	AATAAA	-17	NA	20806465	20796343	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_20798212_20799262_20799352_20799956_20800039_20800301_20800403_20801202_20801360_20802795_20802924_20803432_20803517_20803602_20803671_20805714
transcript_73135.known	chr16	-	2646	9	FSM	ENSG00000196678.14	ENST00000569729.5	2646	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	26.6103245940368	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAGTTATGCATTTGT	-20805503	True	NA	-6	True	AATAAA	-17	NA	20806476	20796343	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_20798212_20799262_20799352_20799956_20800039_20800301_20800403_20801202_20801360_20802795_20802924_20803432_20803517_20803602_20803671_20806407
transcript_73137.known	chr16	-	563	4	FSM	ENSG00000196678.14	ENST00000565884.5	563	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	15.8394724940223	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAGCAGTGTTGCTGAAC	-20806098	False	NA	NA	False	NA	NA	NA	20806119	20802917	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_20802924_20803432_20803517_20803602_20803671_20805714
transcript_7314.known	chr1	-	3522	2	FSM	ENSG00000116990.11	ENST00000372816.3	3522	2	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_1	0	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGAGTGGGGGCAGCTT	-39900594	True	NA	-6	True	AATAAA	-15	NA	39901917	39895427	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_39897971_39900938
transcript_73140.known	chr16	+	2691	20	FSM	ENSG00000005189.20	ENST00000261377.11	2691	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	10.6879692636445	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGGGATGTCCACAGAT	20805708	True	NA	11	True	AATAAA	-20	NA	20806526	20849665	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_20806706_20806951_20807092_20813189_20813303_20814926_20815054_20816115_20816213_20821761_20821903_20824438_20824528_20825832_20825949_20827057_20827197_20827352_20827448_20828434_20828538_20832155_20832260_20833002_20833124_20839754_20839860_20840330_20840469_20843933_20844027_20844628_20844846_20845053_20845242_20846220_20846340_20849398
transcript_73142.known	chr16	+	2447	20	FSM	ENSG00000005189.20	ENST00000564274.5	2447	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	12.702432859654	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGCCTGCCATGTTTCCA	20805879	False	NA	NA	False	AATAAA	-41	NA	20806697	20849480	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_20806818_20806951_20807092_20813189_20813303_20814926_20815054_20816115_20816213_20821761_20821903_20824438_20824528_20825832_20825949_20827057_20827197_20827352_20827448_20828434_20828538_20832155_20832260_20833002_20833124_20839754_20839860_20840330_20840469_20843933_20844027_20844628_20844846_20845053_20845242_20846220_20846340_20849398
transcript_73144.known	chr16	+	2604	19	FSM	ENSG00000005189.20	ENST00000348433.10	2604	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	12.998100525998	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGGGATGTCCACAGAT	20805702	True	NA	11	True	AATAAA	-20	NA	20806520	20849665	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_20806706_20806951_20807092_20813189_20813303_20814926_20815054_20816115_20816213_20821761_20821903_20824438_20824528_20825832_20825949_20827057_20827197_20827352_20827448_20828434_20828538_20832155_20832260_20833002_20833124_20839754_20839860_20840330_20840469_20844628_20844846_20845053_20845242_20846220_20846340_20849398
transcript_73145.known	chr16	+	2549	19	FSM	ENSG00000005189.20	ENST00000566993.5	2549	19	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	10.5633012516605	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATAAATGCCTAAAGTTCA	20805677	True	NA	-15	True	NA	NA	NA	20806495	20849639	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_20806706_20806951_20807092_20813189_20813303_20814984_20815054_20816115_20816213_20821761_20821903_20825832_20825949_20827057_20827197_20827352_20827448_20828434_20828538_20832155_20832260_20833002_20833124_20839754_20839860_20840330_20840469_20843933_20844027_20844628_20844846_20845053_20845242_20846220_20846340_20849398
transcript_7315.known	chr1	-	1944	2	FSM	ENSG00000116990.11	ENST00000372815.1	1944	2	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCTGGTGGAGTGGTAGAG	-39900596	True	NA	-2	True	AATAAA	-16	NA	39901919	39899611	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_39901444_39901807
transcript_73151.known	chr16	+	857	5	FSM	ENSG00000102897.10	ENST00000568663.5	857	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	61.0834470212676	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATCCCTAGAGTTTCTCA	20899874	True	NA	NA	False	NA	NA	NA	20899901	20924263	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_20900005_20900297_20900536_20915555_20915715_20920121_20920215_20923999
transcript_73153.nic	chr16	+	1577	5	NIC	ENSG00000102897.10	novel	769	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	59.8038460301677	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTCTGTCTATTCTTT	20900218	True	NA	17	True	AATAAA	-17	NA	20900449	20925006	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_20900536_20902485_20902718_20915555_20915715_20920121_20920215_20923999
transcript_73155.known	chr16	+	1626	5	FSM	ENSG00000102897.10	ENST00000219168.8	1626	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	52.8695328142778	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTGTCTGTCTATTCT	20900521	False	NA	15	True	AATAAA	-15	NA	20900752	20925004	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_20900890_20902485_20902718_20915555_20915715_20920121_20920215_20923999
transcript_73158.known	chr16	+	1378	4	FSM	ENSG00000102897.10	ENST00000567954.6	1378	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	41.7212975189731	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTCTGTCTATTCTTT	20899663	True	NA	17	True	AATAAA	-17	NA	20900770	20925006	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_20900890_20915555_20915715_20920121_20920215_20923999
transcript_73159.known	chr16	+	931	4	FSM	ENSG00000102897.10	ENST00000562740.5	931	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	54.1623075169029	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGCGGAAGGATGTAAG	20900434	False	NA	NA	False	NA	NA	NA	20900665	20924381	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_20900890_20902485_20902718_20920121_20920215_20923999
transcript_73160.known	chr16	+	1378	6	FSM	ENSG00000011638.11	ENST00000451578.6	1378	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	44.6748251255671	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTCTTTTTTTTTTTTT	21156622	True	NA	NA	False	NA	NA	NA	21158688	21180220	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_21158747_21161084_21161279_21166839_21166912_21170436_21170606_21174009_21174149_21179474
transcript_73161.known	chr16	+	713	6	FSM	ENSG00000011638.11	ENST00000572599.5	713	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	39.1029410658585	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGATTATGGCTTAGAAGA	21156638	True	NA	NA	False	NA	NA	NA	21158704	21179612	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_21158747_21160977_21161009_21161084_21161279_21170436_21170606_21174009_21174149_21179474
transcript_73165.known	chr16	+	1717	5	FSM	ENSG00000011638.11	ENST00000233047.9	1717	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	23.8890665368072	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGAGTGGTTTATTTGC	21156607	True	NA	30	True	AATAAA	-27	NA	21158673	21180616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_21158747_21161084_21161279_21170436_21170606_21174009_21174149_21179474
transcript_73169.known	chr16	+	1812	5	FSM	ENSG00000011638.11	ENST00000261388.7	1812	5	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	9.3407708461347	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGAATTACTGAGTGGTT	21156612	True	NA	23	True	AATAAA	-20	NA	21158678	21180609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_21158747_21160977_21161279_21170436_21170606_21174009_21174149_21179474
transcript_73173.known	chr16	+	584	4	FSM	ENSG00000011638.11	ENST00000572258.5	584	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	34.4995974211616	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGGGATTATGGCTTAGA	21156594	True	NA	NA	False	NA	NA	NA	21158660	21179609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_21158747_21161084_21161279_21170436_21170606_21179474
transcript_73176.nic	chr16	+	1756	4	NIC	ENSG00000011638.11	novel	1812	5	NA	NA	-58	0	intron_retention	FALSE	canonical	3	12	junction_3	36.5786823163438	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGAGTGGTTTATTTGC	21156536	True	NA	30	True	AATAAA	-27	NA	21158602	21180616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_21158747_21160977_21161279_21170436_21170606_21179474
transcript_73177.known	chr16	-	2295	19	FSM	ENSG00000103310.11	ENST00000574091.6	2295	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTTGCCTTCCACATTC	NA	False	NA	NA	False	AATAAA	-14	NA	21211574	21197449	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_21197623_21197765_21197850_21198778_21198863_21199569_21199667_21199742_21199879_21201368_21201559_21201705_21201831_21201931_21202024_21202103_21202292_21203124_21203252_21204029_21204212_21204307_21204405_21205419_21205585_21205730_21205776_21206837_21206991_21209630_21209726_21210108_21210193_21211306_21211396_21211485
transcript_73181.known	chr16	-	1244	8	FSM	ENSG00000103316.12	ENST00000572914.2	1244	8	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_6	14.9829835452879	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGCTTCGGTAACTTC	-21277092	True	NA	-3	True	AATAAA	-19	NA	21278290	21258520	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_21258846_21261253_21261339_21262036_21262159_21267553_21267738_21269789_21269892_21275531_21275595_21277430_21277585_21278081
transcript_732.known	chr1	-	3305	15	FSM	ENSG00000107404.21	ENST00000378888.10	3305	15	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	18.0295958504513	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGATGTGTGGCCTGTGCCC	-1347641	True	NA	-3	True	AAAAAG	-18	NA	1349418	1335277	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1336516_1337976_1338184_1338268_1338437_1338521_1338654_1339286_1339440_1339581_1339650_1339735_1339813_1340037_1340178_1340246_1340317_1340409_1340504_1341666_1341806_1342052_1342157_1342362_1342485_1342688_1342759_1348895
transcript_73204.known	chr16	-	416	2	FSM	ENSG00000180747.15	ENST00000435197.2	416	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTCGTCCTGTGCTGCG	-21519999	False	NA	NA	False	NA	NA	NA	21520010	21502088	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_21502322_21519827
transcript_73208.known	chr16	+	3153	5	FSM	ENSG00000197006.15	ENST00000358154.8	3153	5	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_4	127.723089142097	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTCGTGTAAGTGCTTCA	21585417	True	NA	28	True	AATAAA	-19	NA	21599576	21657471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_21599899_21612644_21612836_21617864_21618075_21624930_21625116_21655226
transcript_73211.known	chr16	+	1817	5	FSM	ENSG00000197006.15	ENST00000396014.8	1817	5	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_4	234.273744794418	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAACAGAAACAAA	21585398	True	NA	NA	False	NA	NA	NA	21599557	21656119	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_21599899_21612644_21612836_21617864_21618075_21624930_21625116_21655229
transcript_73219.nic	chr16	+	1511	4	NIC	ENSG00000197006.15	novel	3153	5	NA	NA	-68	-186	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	280.94958029274	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGGCATCATGTTTG	21585330	True	NA	13	True	AATAAA	-13	NA	21599489	21655933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_21599899_21617864_21618075_21624930_21625116_21655226
transcript_7323.known	chr1	+	2129	14	FSM	ENSG00000168389.18	ENST00000372811.10	2129	14	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_5	8.29771480625342	214	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTGTTTCTGTCTGTG	39953142	True	NA	12	True	CATAAA	-13	NA	39955144	39969956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_39955386_39957086_39957222_39958700_39958826_39965210_39965335_39965470_39965550_39965856_39966015_39966600_39966692_39966810_39966933_39967085_39967170_39967627_39967712_39967803_39967917_39968333_39968478_39968568_39968746_39969504
transcript_73233.nnic	chr16	-	1402	8	NIC	ENSG00000248124.9	novel	1178	8	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_6	49.9824458981269	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTCAGGTTTGTGGGTT	-21819048	True	NA	NA	False	AATAAA	-20	NA	21820468	21810426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_21810839_21811777_21811838_21812285_21812416_21812521_21812612_21817461_21817519_21818655_21818762_21819108_21819482_21820294
transcript_73234.known	chr16	-	1151	8	FSM	ENSG00000248124.9	ENST00000551681.2	1178	8	27	0	10	0	multi-exon	FALSE	canonical	3	45	junction_2	45.0219900919177	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTCAGGTTTGTGGGTT	-21818990	True	NA	NA	False	AATAAA	-20	NA	21820410	21810426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_21810839_21811777_21811838_21812285_21812416_21812521_21812612_21817461_21817519_21818655_21818762_21819301_21819482_21820294
transcript_73237.nic	chr16	-	1044	7	FSM	ENSG00000248124.9	ENST00000692968.1	1001	7	-46	3	-42	0	multi-exon	FALSE	canonical	3	29	junction_6	53.9557431810759	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTCAGGTTTGTGGGTT	NA	False	NA	NA	False	AATAAA	-20	NA	21820483	21810426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_21810839_21811777_21811838_21812285_21812416_21812521_21812612_21817461_21817519_21818655_21818762_21820294
transcript_73246.known	chr16	+	1914	14	FSM	ENSG00000140740.11	ENST00000268379.9	1914	14	0	0	0	0	multi-exon	FALSE	canonical	3	1018	junction_9	47.4736924968971	663	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTATATTCCCATTCATTC	21938736	True	NA	58	True	AATAAA	-38	NA	21953360	21983660	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_21953457_21957234_21957319_21957416_21957567_21958534_21958600_21962459_21962517_21962760_21962886_21965407_21965506_21968627_21968686_21971524_21971621_21971922_21972123_21973895_21973977_21976166_21976244_21980546_21980701_21983087
transcript_73264.known	chr16	+	7398	18	FSM	ENSG00000103319.12	ENST00000263026.10	7398	18	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	9.13376185020894	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGACTCAAATGTCTCC	22203985	True	NA	20	True	AATAAA	-20	NA	22206277	22288738	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_22206680_22225653_22225976_22244629_22244731_22248754_22248816_22250653_22250692_22251150_22251323_22256747_22256898_22257252_22257386_22257642_22257771_22258493_22258696_22260461_22260530_22263109_22263188_22264817_22264881_22266389_22266525_22266687_22266877_22273625_22273751_22280197_22280377_22283886
transcript_73284.known	chr16	+	3690	21	FSM	ENSG00000058600.16	ENST00000299853.10	3690	21	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_5	27.5664651342895	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAATATGTCTCAGCTT	22293567	True	NA	3	True	AGTAAA	-15	NA	22297408	22335096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_22297538_22302930_22303005_22305155_22305207_22308147_22308226_22308924_22309041_22309427_22309511_22313619_22313728_22314078_22314129_22315088_22315209_22316600_22316687_22316994_22317040_22317114_22317207_22318825_22318947_22322849_22322932_22324353_22324414_22324502_22324661_22325204_22325267_22325760_22326279_22328509_22328588_22332059_22332186_22333643
transcript_73298.known	chr16	+	2469	20	FSM	ENSG00000058600.16	ENST00000359210.8	2469	20	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_19	39.4158172336874	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGTTTAATATTTTCTT	22293591	True	NA	17	True	AATAAA	-36	NA	22297432	22334025	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_22297538_22302930_22303005_22305155_22305207_22308147_22308226_22308924_22309041_22309427_22309511_22313619_22313728_22314078_22314129_22315088_22315209_22316600_22316687_22316994_22317040_22317114_22317207_22318825_22318947_22322849_22322932_22324353_22324414_22324502_22324661_22325204_22325267_22325760_22326279_22328509_22328588_22333643
transcript_733.known	chr1	-	2926	15	FSM	ENSG00000107404.21	ENST00000378891.9	2926	15	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_4	29.9919206807842	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTGGCCTGTGCCCCT	-1348960	False	NA	-1	True	AAAAAG	-20	NA	1349112	1335275	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1336516_1337976_1338184_1338268_1338437_1338521_1338654_1339361_1339440_1339581_1339650_1339735_1339813_1340037_1340178_1340246_1340317_1340409_1340504_1341666_1341806_1342052_1342157_1342362_1342485_1342688_1342759_1348895
transcript_73305.known	chr16	+	3655	20	FSM	ENSG00000058600.16	ENST00000615879.4	3655	20	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	46.9673075430063	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTCTCAGCTTTTCCA	22293533	True	NA	8	True	AGTAAA	-20	NA	22297374	22335101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_22297538_22305155_22305207_22308147_22308226_22308924_22309041_22309427_22309511_22313619_22313728_22314078_22314129_22315088_22315209_22316600_22316687_22316994_22317040_22317114_22317207_22318825_22318947_22322849_22322932_22324353_22324414_22324502_22324661_22325204_22325267_22325760_22326279_22328509_22328588_22332059_22332186_22333643
transcript_73310.nic	chr16	+	2629	19	ISM	ENSG00000058600.16	ENST00000564209.5	2464	21	-2	4830	0	14	5prime_fragment	FALSE	canonical	3	152	junction_5	16.7999301879796	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGATTCAGTTCTGTTCA	22293567	True	NA	NA	False	AAGAAA	-12	NA	22297408	22329105	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_22297538_22302930_22303005_22305155_22305207_22308147_22308226_22308924_22309041_22309427_22309511_22313619_22313728_22314078_22314129_22315088_22315209_22316600_22316687_22316994_22317040_22317114_22317207_22318825_22318947_22322849_22322932_22324353_22324414_22324502_22324661_22325204_22325267_22325760_22326279_22328509
transcript_73318.known	chr16	+	4800	18	FSM	ENSG00000058600.16	ENST00000564061.5	4800	18	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_5	17.1823116579241	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACATAGA	22293613	True	NA	NA	False	NA	NA	NA	22297454	22329091	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_22297538_22302930_22303005_22305155_22305207_22308147_22308226_22308924_22309041_22309427_22309511_22313619_22313728_22314078_22314129_22315088_22315209_22316600_22316687_22316994_22317040_22317114_22317207_22318825_22318947_22322849_22322932_22324353_22324414_22324502_22324661_22325204_22325267_22325760
transcript_73322.known	chr16	+	1549	2	FSM	ENSG00000058600.16	ENST00000565117.1	1549	2	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCATGGTGCTATCTTCA	22331424	False	NA	11	True	AATAAA	-17	NA	22331434	22334441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_22332186_22333643
transcript_73330.known	chr16	-	3366	7	FSM	ENSG00000257122.5	ENST00000551766.5	3366	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	40.970178856768	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATATGCCTGGATCTCAC	-22437694	False	21	75	True	AATAAA	-34	NA	22437715	22418671	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_22420595_22426212_22426367_22429795_22429949_22432725_22432835_22434626_22434812_22435681_22435813_22437004
transcript_73342.known	chr16	-	2704	5	FSM	ENSG00000140743.8	ENST00000268383.7	2704	5	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	9.98436277385793	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGGATCTGTGTCTTAC	-22371292	True	NA	NA	False	AATAAA	-19	NA	22374619	22345935	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_22347824_22349278_22349444_22349700_22349850_22364901_22365015_22374230
transcript_73348.known	chr16	-	711	4	FSM	ENSG00000140743.8	ENST00000561630.1	711	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	92.9551863354954	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGCAGCAGCTGGGGGC	-22371110	False	NA	NA	False	NA	NA	NA	22374437	22347633	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_22347824_22349278_22349444_22349700_22349850_22374230
transcript_73350.known	chr16	+	2329	2	FSM	ENSG00000122254.7	ENST00000261374.4	2329	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGGCTTTTCTCTGTAA	22814105	True	NA	11	True	AATAAA	-23	NA	22814161	22916338	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_22815096_22914943
transcript_73351.known	chr16	-	2768	1	FSM	ENSG00000260566.2	ENST00000563129.2	2768	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACATTTCTCCTTTCTCC	-23064161	False	NA	-3	True	AATAAA	-25	NA	23064173	23061405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_23061400_23064200
transcript_73352.known	chr16	+	3477	13	FSM	ENSG00000166828.3	ENST00000300061.3	3477	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	1.44096803881588	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTGTTCAAGTTTTGT	23182694	True	NA	NA	False	AATAAA	-23	NA	23182744	23216883	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_23182814_23186227_23186589_23189370_23189672_23192351_23192543_23194170_23194275_23197263_23197428_23209749_23209849_23212033_23212152_23212677_23212757_23212836_23212895_23213101_23213164_23214711_23214788_23215088
transcript_73354.nnic	chr16	+	2601	13	NNC	ENSG00000168447.11	novel	1852	12	NA	NA	-547	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_10	7.22841614740048	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCAGCTGTGTTGTTTGTT	23301359	True	NA	7	True	AATAAA	-16	NA	23301754	23381294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_23301932_23348591_23348911_23352800_23353075_23355298_23355490_23367855_23367960_23371298_23371463_23371775_23371884_23375737_23375856_23377164_23377241_23377328_23377387_23378705_23378768_23380093_23380170_23380420
transcript_73355.nnic	chr16	+	2609	13	NNC	ENSG00000168447.11	novel	1852	12	NA	NA	-520	0	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	8.61321658847611	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCAGCTGTGTTGTTTGTT	23301386	True	NA	7	True	AATAAA	-16	NA	23301781	23381294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_23301967_23348591_23348911_23352800_23353075_23355298_23355490_23367855_23367960_23371298_23371463_23371775_23371884_23375737_23375856_23377164_23377241_23377328_23377387_23378705_23378768_23380093_23380170_23380420
transcript_73356.known	chr16	+	2560	13	FSM	ENSG00000168447.11	ENST00000343070.7	2560	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	9.03196484099052	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCAGCTGTGTTGTTTGTT	23302283	True	NA	7	True	AATAAA	-16	NA	23302301	23381294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_23302438_23348591_23348911_23352800_23353075_23355298_23355490_23367855_23367960_23371298_23371463_23371775_23371884_23375737_23375856_23377164_23377241_23377328_23377387_23378705_23378768_23380093_23380170_23380420
transcript_73357.nnic	chr16	+	2493	12	NNC	ENSG00000168447.11	novel	1825	11	NA	NA	-547	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_6	10.1264729568322	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCAGCTGTGTTGTTTGTT	23301359	True	NA	7	True	AATAAA	-16	NA	23301754	23381294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_23301932_23348591_23348911_23352800_23353075_23355298_23355490_23367855_23367960_23371298_23371463_23375737_23375856_23377164_23377241_23377328_23377387_23378705_23378768_23380093_23380170_23380420
transcript_73370.known	chr16	-	2935	17	FSM	ENSG00000168434.13	ENST00000307149.10	2935	17	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_10	12.5597011807606	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGACTGTTTCCTTCTTCT	-23451607	True	NA	-1	True	AATAAA	-20	NA	23453189	23388492	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_23389087_23392379_23392524_23393232_23393348_23398045_23398130_23403693_23403835_23406075_23406263_23410294_23410361_23413447_23413565_23416966_23417122_23418699_23418828_23424748_23424948_23433544_23433668_23434635_23434719_23442476_23442646_23445047_23445165_23445812_23445962_23452825
transcript_73388.known	chr16	+	730	3	FSM	ENSG00000260136.6	ENST00000570080.1	730	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	8.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTGTTCAAAGGATCCT	23452458	True	NA	-7	True	NA	NA	NA	23452757	23457588	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_23453266_23455469_23455531_23457427
transcript_73389.known	chr16	+	579	2	FSM	ENSG00000260136.6	ENST00000565747.5	579	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAATGGAATTTTCTTAA	23452707	False	NA	10	True	AATAAA	-33	NA	23453006	23455789	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_23453266_23455469
transcript_73390.known	chr16	+	438	2	FSM	ENSG00000260136.6	ENST00000562842.1	438	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATATAGTCTTTTCTCAT	23452707	False	NA	11	True	CATAAA	-16	NA	23453006	23457606	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_23453266_23457427
transcript_73399.known	chr16	-	5973	17	FSM	ENSG00000103365.15	ENST00000309859.8	5973	17	0	0	0	0	multi-exon	FALSE	canonical	3	492	junction_14	29.7352247973679	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCAGTGTCGTCTTTTTT	-23499638	True	NA	-5	True	AATAAA	-15	NA	23510494	23463541	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_23467701_23468885_23468997_23469995_23470166_23474903_23475062_23478367_23478502_23478882_23478912_23479764_23479888_23480644_23480771_23482922_23483005_23486014_23486153_23486709_23486791_23488605_23488710_23491676_23491801_23493359_23493459_23494302_23494379_23495693_23495779_23510320
transcript_73420.nic	chr16	-	4194	16	NIC	ENSG00000103365.15	novel	5973	17	NA	NA	0	425	intron_retention	FALSE	canonical	3	496	junction_12	28.6919268552439	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGTCTGATCTTTTGAC	-23499638	True	NA	-13	True	NA	NA	NA	23510494	23466164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_23467701_23468885_23468997_23469995_23470166_23474903_23475062_23478367_23478502_23478882_23478912_23479764_23479888_23480644_23480771_23482922_23483005_23486014_23486153_23486709_23486791_23488605_23488710_23491676_23491801_23493359_23494379_23495693_23495779_23510320
transcript_73422.nic	chr16	-	3768	16	NIC	ENSG00000103365.15	novel	5973	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	496	junction_12	28.6919268552439	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTGGAGTGTTGAGTA	-23499638	True	NA	-2	True	AATAAA	-18	NA	23510494	23466590	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_23467701_23468885_23468997_23469995_23470166_23474903_23475062_23478367_23478502_23478882_23478912_23479764_23479888_23480644_23480771_23482922_23483005_23486014_23486153_23486709_23486791_23488605_23488710_23491676_23491801_23493359_23494379_23495693_23495779_23510320
transcript_73426.known	chr16	-	3840	10	FSM	ENSG00000103356.18	ENST00000674054.1	3840	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	72.3414400645805	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGAGAAGCAGTATTTTT	-23551447	True	NA	-5	True	AGTAAA	-17	NA	23557350	23522016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_23523418_23523510_23524455_23525243_23525380_23529501_23529633_23529743_23529898_23532656_23532766_23534887_23535361_23544513_23544704_23552148_23552305_23557204
transcript_73432.known	chr16	-	5196	9	FSM	ENSG00000103356.18	ENST00000449606.7	5196	9	0	0	0	0	multi-exon	TRUE	canonical	3	229	junction_6	10.2522863303753	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGTGTGCTGTGCTATC	-23551447	True	NA	-1	True	AATAAA	-37	NA	23557350	23520753	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_23524455_23525243_23525380_23529501_23529633_23529743_23529898_23532656_23532766_23534887_23535361_23544513_23544704_23552148_23552305_23557204
transcript_73445.known	chr16	+	4745	7	FSM	ENSG00000103353.16	ENST00000395878.8	4745	7	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_1	66.210942365208	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCGTCTCTTTTTCCTTCC	23544669	True	NA	14	True	ATTAAA	-14	NA	23557726	23574389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_23557768_23557949_23558280_23559467_23559677_23562205_23562272_23562624_23562731_23566986_23567070_23570479
transcript_73450.nnic	chr16	+	4964	6	NIC	ENSG00000103353.16	novel	4745	7	NA	NA	-296	0	combination_of_known_splicesites	FALSE	canonical	3	46	junction_5	214.711527403631	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCGTCTCTTTTTCCTTCC	23557395	False	NA	14	True	ATTAAA	-14	NA	23557424	23574389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_23557768_23557949_23558280_23559467_23559677_23562205_23562272_23562624_23562731_23570479
transcript_73461.known	chr16	-	665	5	FSM	ENSG00000004779.10	ENST00000007516.8	665	5	0	0	0	0	multi-exon	FALSE	canonical	3	4011	junction_2	148.150261559	1125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCCCCCATCTTCAGT	-23572507	True	NA	-25	True	AATAAA	-14	NA	23596316	23581013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_23581174_23582275_23582376_23585335_23585424_23587196_23587320_23596122
transcript_73463.known	chr16	-	503	4	FSM	ENSG00000004779.10	ENST00000562133.5	503	4	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_3	1925.93013603528	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCCCCCATCTTCAGT	-23572468	True	NA	-25	True	AATAAA	-14	NA	23596277	23581013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_23581174_23582275_23582376_23585335_23585424_23596122
transcript_73464.known	chr16	-	3963	13	FSM	ENSG00000083093.10	ENST00000568219.5	3963	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	47.0451172339442	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTCTGCTTGGCATGTTA	-23638832	True	NA	-8	True	AATAAA	-14	NA	23641285	23603167	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_23603670_23607863_23608013_23614003_23614092_23621361_23621479_23622968_23623131_23624008_23624095_23626235_23626398_23629203_23629276_23629639_23630470_23634861_23636335_23637849_23637953_23638069_23638130_23641126
transcript_73469.nic	chr16	-	1219	4	ISM	ENSG00000083093.10	ENST00000261584.9	4008	13	-20	32335	-20	535	5prime_fragment	FALSE	canonical	3	111	junction_3	12.4988888395018	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAACAGAGAAATCTTTAA	-23638877	True	NA	NA	False	AATGAA	-24	NA	23641330	23635499	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_23636335_23637849_23637953_23638069_23638130_23641109
transcript_73477.known	chr16	+	878	6	FSM	ENSG00000166847.10	ENST00000563998.5	878	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_5	131.825035558501	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTATGAACAGTCACTTTG	23633911	True	NA	100	True	NA	NA	NA	23641470	23667371	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_23641591_23642954_23643024_23658506_23658626_23661169_23661282_23665625_23665729_23667016
transcript_73478.known	chr16	+	10954	6	FSM	ENSG00000166847.10	ENST00000300087.7	10954	6	0	0	0	0	multi-exon	TRUE	canonical	3	301	junction_5	22.3571017799714	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATTTTTCAAAGTCTTC	23633906	True	NA	19	True	AATAAA	-31	NA	23641465	23677472	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_23641591_23642954_23643024_23658506_23658626_23661169_23661282_23665625_23665729_23667046
transcript_73479.known	chr16	+	772	5	FSM	ENSG00000166847.10	ENST00000568589.5	772	5	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_3	19.2142525225417	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTTGAGGGGTGATACT	23633951	True	NA	NA	False	AATAGA	-1	NA	23641510	23666017	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_23641591_23642954_23643024_23658506_23658626_23661169_23661282_23665625
transcript_73480.known	chr16	+	3405	1	FSM	ENSG00000166847.10	ENST00000563614.1	3405	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGCTTCCTTTTTGTTTT	23666454	False	NA	38	True	AATAAA	-30	NA	23666467	23669872	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_23666500_23669900
transcript_73481.known	chr16	+	523	3	FSM	ENSG00000166847.10	ENST00000568272.1	523	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	166.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGGTTTGCAAGTATAGT	23633969	True	NA	NA	False	AATAAA	-29	NA	23641528	23651147	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_23641591_23642954_23643024_23650755
transcript_73482.known	chr16	-	3337	22	FSM	ENSG00000134398.15	ENST00000256797.9	3337	22	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_7	2.2985749306947	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAATATTCTGTACAATT	-23713093	True	NA	43	True	CATAAA	-29	NA	23713222	23690309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_23691044_23691128_23691197_23691301_23691426_23691962_23692091_23692183_23692332_23694727_23694928_23695018_23695119_23695199_23695390_23695893_23695979_23700538_23700705_23700958_23701115_23702151_23702274_23702389_23702538_23702623_23702703_23704882_23705148_23706329_23706432_23706753_23706862_23707006_23707080_23710171_23710245_23710515_23710550_23710912_23711019_23713094
transcript_73484.known	chr16	-	3169	21	FSM	ENSG00000134398.15	ENST00000457008.6	3169	21	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	2.39321958875486	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGTTCCGAATTCAATAGA	-23713097	True	NA	27	True	CATAAA	-13	NA	23713226	23690325	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_23691044_23691128_23691197_23691301_23691426_23691962_23692091_23692183_23692332_23694727_23694928_23695018_23695119_23695199_23695390_23695893_23695979_23700538_23700705_23702151_23702274_23702389_23702538_23702623_23702703_23704882_23705148_23706329_23706432_23706753_23706862_23707006_23707080_23710171_23710245_23710515_23710550_23710912_23711019_23713094
transcript_73487.known	chr16	+	2160	10	FSM	ENSG00000166851.15	ENST00000300093.9	2160	10	0	0	0	0	multi-exon	FALSE	canonical	3	1840	junction_4	147.424640719786	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTGTATTTCCTGAG	23656622	True	NA	61	True	ATTAAA	-16	NA	23678888	23690367	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_23679341_23680083_23680253_23680913_23681059_23682063_23682158_23683869_23684090_23687468_23687625_23688667_23688746_23689237_23689393_23689493_23689677_23689859
transcript_73496.nic	chr16	+	2718	9	NIC	ENSG00000166851.15	novel	2160	10	NA	NA	-47	0	intron_retention	TRUE	canonical	3	1840	junction_4	154.922510872371	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTCTTGTATTTCCTGA	23656555	True	NA	60	True	ATTAAA	-15	NA	23678821	23690366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_23679341_23680083_23680253_23680913_23681059_23682063_23682158_23683869_23684090_23687468_23687625_23688667_23689393_23689493_23689677_23689859
transcript_73507.known	chr16	-	759	5	FSM	ENSG00000134398.15	ENST00000562458.2	759	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.34520787991171	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAAATTTGTAAAATTAG	-23694713	False	NA	NA	False	NA	NA	NA	23694760	23690637	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_23691044_23691128_23691197_23691301_23691426_23691962_23692091_23694727
transcript_73509.known	chr16	+	1967	7	FSM	ENSG00000166869.3	ENST00000300113.3	1967	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	4.42216638714053	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAGTGTGAATGCATTCG	23754759	False	NA	8	True	AATAAA	-15	NA	23755025	23758935	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_23755117_23755660_23755734_23755846_23755928_23756062_23756194_23756387_23756450_23757200_23757324_23757529
transcript_73516.nic	chr16	+	3962	17	ISM	ENSG00000122257.20	ENST00000319715.10	6858	18	-78	3350	-68	-600	5prime_fragment	FALSE	canonical	3	72	junction_16	28.9362850716881	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGAGGAAAGTGAGGGTTT	NA	False	NA	104	True	AAAAAG	-8	NA	24539487	24569513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_24540793_24546162_24546263_24548944_24548982_24553512_24553558_24555614_24555704_24555820_24555918_24556307_24556448_24559504_24559678_24561611_24561716_24561823_24562162_24563198_24563296_24563422_24563502_24563609_24563665_24564796_24564866_24567142_24567506_24567791_24567894_24568744
transcript_73518.nic	chr16	+	4448	17	ISM	ENSG00000122257.20	ENST00000319715.10	6858	18	-78	2864	-68	-114	5prime_fragment	FALSE	canonical	3	72	junction_16	28.9362850716881	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAGTCAAAGAGGAAAAAGT	NA	False	NA	NA	False	AAGAAA	-6	NA	24539487	24569999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_24540793_24546162_24546263_24548944_24548982_24553512_24553558_24555614_24555704_24555820_24555918_24556307_24556448_24559504_24559678_24561611_24561716_24561823_24562162_24563198_24563296_24563422_24563502_24563609_24563665_24564796_24564866_24567142_24567506_24567791_24567894_24568744
transcript_73522.nic	chr16	+	3701	16	ISM	ENSG00000122257.20	ENST00000348022.6	5739	17	-1015	3429	2	-679	5prime_fragment	FALSE	canonical	3	38	junction_15	32.6628569207016	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCAAAAGAGAAGGAGAGTG	24535025	True	NA	25	True	AATACA	-3	NA	24539567	24569434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_24540793_24546162_24546263_24548944_24548982_24553512_24553558_24555614_24555704_24555820_24555918_24556307_24556448_24559504_24559678_24561611_24561716_24561823_24562162_24563198_24563296_24563422_24563502_24563609_24563665_24564796_24564866_24567142_24567506_24568744
transcript_73524.nic	chr16	+	4080	16	ISM	ENSG00000122257.20	ENST00000348022.6	5739	17	-1040	3075	-13	-325	5prime_fragment	FALSE	canonical	3	38	junction_15	32.6628569207016	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGTAAAACCTGCTAAAG	24535000	True	NA	NA	False	GATAAA	-45	NA	24539542	24569788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_24540793_24546162_24546263_24548944_24548982_24553512_24553558_24555614_24555704_24555820_24555918_24556307_24556448_24559504_24559678_24561611_24561716_24561823_24562162_24563198_24563296_24563422_24563502_24563609_24563665_24564796_24564866_24567142_24567506_24568744
transcript_73525.nic	chr16	+	4262	16	ISM	ENSG00000122257.20	ENST00000348022.6	5739	17	-1011	2864	6	-114	5prime_fragment	FALSE	canonical	3	38	junction_15	32.6628569207016	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAGTCAAAGAGGAAAAAGT	24535029	True	NA	NA	False	AAGAAA	-6	NA	24539571	24569999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_24540793_24546162_24546263_24548944_24548982_24553512_24553558_24555614_24555704_24555820_24555918_24556307_24556448_24559504_24559678_24561611_24561716_24561823_24562162_24563198_24563296_24563422_24563502_24563609_24563665_24564796_24564866_24567142_24567506_24568744
transcript_73534.nic	chr16	+	2059	8	ISM	ENSG00000122257.20	ENST00000567686.5	1138	10	1831	1860	-13	0	internal_fragment	FALSE	canonical	3	135	junction_3	11.5068746089156	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTAAGTAGTGAGAAGTCT	24535000	True	NA	34	True	AATAAA	-36	NA	24539542	24559805	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_24540793_24546162_24546263_24548944_24548982_24553512_24553558_24555614_24555704_24555820_24555918_24556307_24556448_24559504
transcript_73536.nic	chr16	+	2802	4	ISM	ENSG00000122257.20	ENST00000567686.5	1138	10	1840	6729	-4	-2	internal_fragment	FALSE	canonical	3	135	junction_3	16.779617264871	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGCTTGTTTTGTGGAT	24535009	True	NA	1	True	AATAAA	-11	NA	24539551	24554936	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_24540793_24546162_24546263_24548944_24548982_24553512
transcript_73537.known	chr16	+	854	3	FSM	ENSG00000122257.20	ENST00000452655.6	854	3	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	9	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGCCATTTTCACGTT	24540446	False	NA	13	True	AATAAA	-17	NA	24540495	24549401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_24540793_24546162_24546263_24548944
transcript_73544.known	chr16	+	8303	24	FSM	ENSG00000090905.19	ENST00000315183.11	8303	24	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_7	65.966795794915	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAGTGGTTTGGATCTT	24723232	True	NA	42	True	AATAAA	-19	NA	24729694	24826221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_24729847_24730252_24730301_24750725_24750814_24758338_24758361_24776932_24777359_24789231_24791818_24793472_24793650_24794543_24794720_24795906_24795940_24797489_24797571_24797914_24797967_24804176_24804320_24805013_24805152_24805604_24805734_24806205_24806284_24806573_24806785_24809349_24809482_24815146_24815306_24816815_24816957_24818592_24818701_24820138_24820361_24822076_24822148_24822873_24823014_24823431
transcript_73553.nic	chr16	+	596	3	ISM	ENSG00000090905.19	ENST00000395799.8	8491	25	-300	75441	-300	0	5prime_fragment	FALSE	canonical	3	128	junction_2	16.5	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GACGACAAGAAAAAGAAGGA	24729337	False	NA	NA	False	AAAAAG	-7	NA	24729350	24750777	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_24729847_24730252_24730301_24750725
transcript_73558.known	chr16	+	454	3	FSM	ENSG00000090905.19	ENST00000566108.2	454	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GACGACAAGAAAAAGAAGGA	24610050	True	NA	NA	False	AAAAAG	-7	NA	24610208	24750777	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_24610485_24640883_24641010_24750725
transcript_73559.known	chr16	+	8491	25	FSM	ENSG00000090905.19	ENST00000395799.8	8491	25	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_12	81.6190230923867	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAAAGTGGTTTGGAT	24723188	True	NA	39	True	AATAAA	-16	NA	24729650	24826218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_24729847_24730252_24730301_24750725_24750814_24758338_24758361_24776932_24777359_24789231_24791818_24793472_24793650_24794543_24794720_24795906_24795940_24797489_24797571_24797914_24797967_24804176_24804320_24804704_24804852_24805013_24805152_24805604_24805734_24806205_24806284_24806573_24806785_24809349_24809482_24815146_24815306_24816815_24816957_24818592_24818701_24820138_24820361_24822076_24822148_24822873_24823014_24823431
transcript_73561.nic	chr16	-	3669	22	NIC	ENSG00000140750.17	novel	3495	20	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_21	130.230321000666	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAACTTCATAATTCTTG	-25010008	True	NA	-25	True	ATTAAA	-19	NA	25015406	24919394	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_24920261_24927683_24927733_24930783_24931405_24935469_24935640_24939363_24939598_24941986_24942144_24943770_24943863_24947481_24947596_24949403_24949485_24952288_24952371_24952930_24953043_24954602_24954731_24959670_24959753_24959910_24959980_24964196_24964309_24968350_24968428_24968660_24968773_24970506_24970581_24977214_24977320_24978965_24979006_25013862_25013957_25015208
transcript_73565.nic	chr16	-	3575	21	NIC	ENSG00000140750.17	novel	3495	20	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	107.625496514534	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAACTTCATAATTCTTG	-25010008	True	NA	-25	True	ATTAAA	-19	NA	25015406	24919394	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_24920261_24927683_24927733_24930783_24931405_24935469_24935640_24939363_24939598_24941986_24942144_24943770_24943863_24947481_24947596_24949403_24949485_24952288_24952371_24952930_24953043_24954602_24954731_24959670_24959753_24959910_24959980_24964196_24964309_24968350_24968428_24968660_24968773_24970506_24970581_24977214_24977320_24978965_24979006_25015208
transcript_73570.known	chr16	-	3495	20	FSM	ENSG00000140750.17	ENST00000289968.11	3495	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	119.884986434078	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATAATTCTTGGAGGTA	-25009971	True	NA	-19	True	ATTAAA	-25	NA	25015369	24919388	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_24920261_24930783_24931405_24935469_24935640_24939363_24939598_24941986_24942144_24943770_24943863_24947481_24947596_24949403_24949485_24952288_24952371_24952930_24953043_24954602_24954731_24959670_24959753_24959910_24959980_24964196_24964309_24968350_24968428_24968660_24968773_24970506_24970581_24977214_24977320_24978965_24979006_25015208
transcript_73574.nic	chr16	-	3341	20	NIC	ENSG00000140750.17	novel	3495	20	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	124.705281372587	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAACTTCATAATTCTTG	-25010008	True	NA	-25	True	ATTAAA	-19	NA	25015406	24919394	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_24920261_24927683_24927733_24930783_24931405_24935469_24935640_24941986_24942144_24943770_24943863_24947481_24947596_24949403_24949485_24952288_24952371_24952930_24953043_24954602_24954731_24959670_24959753_24959910_24959980_24964196_24964309_24968350_24968428_24968660_24968773_24970506_24970581_24977214_24977320_24978965_24979006_25015208
transcript_73577.known	chr16	-	3219	19	FSM	ENSG00000140750.17	ENST00000303665.9	3219	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	136.616250863505	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTCATAATTCTTGGA	-25009933	True	NA	-23	True	ATTAAA	-21	NA	25015331	24919392	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_24920261_24930783_24931405_24935469_24935640_24941986_24942144_24943770_24943863_24947481_24947596_24949403_24949485_24952288_24952371_24952930_24953043_24954602_24954731_24959670_24959753_24959910_24959980_24964196_24964309_24968350_24968428_24968660_24968773_24970506_24970581_24977214_24977320_24978965_24979006_25015208
transcript_73589.known	chr16	-	1292	3	FSM	ENSG00000140750.17	ENST00000571843.1	1292	3	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_1	3.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAACTTCATAATTCTTG	-24931137	False	NA	-25	True	ATTAAA	-19	NA	24931160	24919394	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_24920261_24927683_24927733_24930783
transcript_73590.known	chr16	-	645	7	FSM	ENSG00000140750.17	ENST00000571480.5	645	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	202.542793832151	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGAGAATTCCTTGATAA	-25009939	True	NA	NA	False	AATAAA	-16	NA	25015337	24964196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_24964309_24968350_24968428_24968660_24968769_24970506_24970581_24977214_24977320_24978965_24979006_25015208
transcript_73591.known	chr16	+	1032	1	FSM	ENSG00000262587.3	ENST00000619106.1	1032	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCGCGGTGTCATTAGAGT	25031492	True	NA	11	True	ATTAAA	-24	NA	25031743	25032775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_25031700_25032800
transcript_73592.known	chr16	-	534	1	FSM	ENSG00000275494.1	ENST00000613406.1	534	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGGATTTGCTTAGTGAAT	-25106926	True	NA	0	True	AATAAA	-18	NA	25107102	25106568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_25106600_25107100
transcript_73593.nic	chr16	+	1552	12	NIC	ENSG00000205629.12	novel	1529	12	NA	NA	-22	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_2	294.230078073224	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGCCTGTGGTTGGACCTC	25103804	True	NA	28	True	AATAAA	-16	NA	25111708	25178228	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_25111997_25125963_25126127_25128474_25128571_25132401_25132524_25140170_25140248_25151553_25151616_25161101_25161205_25164597_25164719_25169111_25169214_25170713_25170806_25174936_25175035_25178000
transcript_73595.nic	chr16	+	1368	11	NIC	ENSG00000205629.12	novel	1352	11	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	226.314029613721	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGCCTGTGGTTGGACCTC	25103825	True	NA	28	True	AATAAA	-16	NA	25111729	25178228	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_25111997_25128474_25128571_25132401_25132524_25140170_25140248_25151553_25151616_25161101_25161205_25164597_25164719_25169111_25169214_25170713_25170806_25174936_25175035_25178000
transcript_73604.known	chr16	+	1168	9	FSM	ENSG00000205629.12	ENST00000564011.5	1168	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	268.429692843396	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTTGTTTAAATAAATCTCA	25103830	True	NA	-2	True	NA	NA	NA	25111734	25178198	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_25111997_25128474_25128571_25132401_25132524_25140170_25140248_25164597_25164719_25169111_25169214_25170713_25170806_25174936_25175035_25178000
transcript_73607.known	chr16	+	1529	12	FSM	ENSG00000205629.12	ENST00000380962.9	1529	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	294.230078073224	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGTTGGACCTCTGC	25103826	True	NA	31	True	AATAAA	-19	NA	25111730	25178231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_25111997_25125963_25126127_25128474_25128567_25132401_25132524_25140170_25140248_25151553_25151616_25161101_25161205_25164597_25164719_25169111_25169214_25170713_25170806_25174936_25175035_25178000
transcript_73608.known	chr16	+	1352	11	FSM	ENSG00000205629.12	ENST00000399069.8	1352	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	226.314029613721	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGCCTGTGGTTGGACCTC	25103837	True	NA	28	True	AATAAA	-16	NA	25111741	25178228	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_25111997_25128474_25128567_25132401_25132524_25140170_25140248_25151553_25151616_25161101_25161205_25164597_25164719_25169111_25169214_25170713_25170806_25174936_25175035_25178000
transcript_73609.known	chr16	-	3667	7	FSM	ENSG00000155592.16	ENST00000569150.1	3667	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	12.657891697365	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTCTTCAAGGATATAAAA	-25257522	False	NA	NA	False	NA	NA	NA	25257557	25239493	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_25240739_25243784_25244277_25246706_25247391_25251908_25252047_25252945_25253038_25255205_25255393_25256728
transcript_73611.known	chr16	-	2332	5	FSM	ENSG00000155592.16	ENST00000565590.1	2332	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	6.21992765231236	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTTGTGTAATCTAAAA	-25257499	False	NA	NA	False	AATAAA	-7	NA	25257534	25246270	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_25247391_25251908_25252036_25252945_25253038_25255205_25255393_25256728
transcript_73615.known	chr16	+	2431	8	FSM	ENSG00000155666.12	ENST00000286096.9	2431	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	4.58034844053754	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGCTGGTCTTGAACT	27202901	True	NA	24	True	AATAGA	-20	NA	27203525	27221768	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_27203637_27210092_27210622_27213584_27213752_27214875_27215009_27215944_27215990_27218960_27219111_27220392_27220486_27220565
transcript_73617.nic	chr16	+	2385	8	NIC	ENSG00000155666.12	novel	798	4	NA	NA	-56	-8	intron_retention	FALSE	canonical	2	5	junction_1	9.3328474120349	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCCTCTGTTTTTTGTTT	27203122	False	NA	12	True	NA	NA	NA	27203746	27221714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_27203866_27210092_27210622_27213584_27213752_27214875_27215009_27215944_27215990_27218960_27219111_27220392_27220486_27220565
transcript_73619.nic	chr16	+	2380	7	NIC	ENSG00000155666.12	novel	2431	8	NA	NA	-30	-6	intron_retention	FALSE	canonical	2	6	junction_6	9.7410927974683	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGCCCAGGCTGGTCT	27202853	True	NA	18	True	AATAGA	-14	NA	27203477	27221762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_27203637_27210092_27210622_27213584_27213752_27214875_27215009_27215944_27215990_27218960_27219111_27220565
transcript_73634.nic	chr16	+	2098	2	ISM	ENSG00000155666.12	ENST00000562269.1	779	4	-39	1611	-30	316	intron_retention	FALSE	canonical	3	35	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAAATAAAGGGAGAAGAAA	27202853	True	NA	NA	False	AATAAA	-7	NA	27203477	27212031	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_27203637_27210092
transcript_73637.known	chr16	-	1042	8	FSM	ENSG00000169189.17	ENST00000361439.9	1042	8	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_7	37.2766819930122	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGTCTGTGTTCTCGAGC	-27267309	True	NA	-3	True	AATAAA	-22	NA	27268772	27224993	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_27225237_27225725_27225847_27226719_27226837_27233000_27233148_27234187_27234266_27235177_27235300_27257434_27257582_27268705
transcript_73642.nic	chr16	+	3963	12	NIC	ENSG00000077238.14	novel	3624	11	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_4	37.001451836604	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTATGTATTAACCAAA	27311839	True	NA	29	True	AATAAA	-18	NA	27313878	27364778	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_27314021_27330065_27330199_27340185_27340274_27341069_27341314_27342120_27342260_27344868_27345021_27346466_27346619_27352539_27352697_27355807_27355908_27358915_27358995_27360765_27360816_27362251
transcript_73643.nnic	chr16	+	3781	12	NNC	ENSG00000077238.14	novel	3624	11	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	38.3909855121621	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTATGTATTAACCAAA	27311845	True	NA	29	True	AATAAA	-18	NA	27313884	27364778	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_27314021_27330065_27330199_27340185_27340274_27342120_27342260_27344593_27344662_27344868_27345021_27346466_27346619_27352539_27352697_27355807_27355908_27358915_27358995_27360765_27360816_27362251
transcript_73650.known	chr16	+	3624	11	FSM	ENSG00000077238.14	ENST00000395762.7	3624	11	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	20.4355083127384	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTATGTATTAACCAAA	27311934	True	NA	29	True	AATAAA	-18	NA	27313973	27364778	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_27314021_27330065_27330199_27340185_27340274_27342120_27342260_27344868_27345021_27346466_27346619_27352539_27352697_27355807_27355908_27358915_27358995_27360765_27360816_27362251
transcript_73655.known	chr16	+	3539	10	FSM	ENSG00000077238.14	ENST00000543915.6	3539	10	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	22.432339970302	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTATGTATTAACCAAA	27311886	True	NA	29	True	AATAAA	-18	NA	27313925	27364778	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_27314021_27340185_27340274_27342120_27342260_27344868_27345021_27346466_27346619_27352539_27352697_27355807_27355908_27358915_27358995_27360765_27360816_27362251
transcript_73665.known	chr16	+	2953	9	FSM	ENSG00000103522.16	ENST00000395754.4	2953	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	1.76334199745824	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGAGGTCAAGTTGTTTGT	27427171	True	NA	16	True	AATAAA	-33	NA	27427243	27450485	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_27427362_27430055_27430121_27434346_27434450_27437487_27437688_27442961_27443117_27444541_27444720_27445176_27445277_27446006_27446089_27448533
transcript_73668.known	chr16	-	7090	37	FSM	ENSG00000077235.18	ENST00000356183.9	7090	37	0	0	0	0	multi-exon	TRUE	canonical	2	235	junction_3	89.2217725185844	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTTTTGTGTGTTTCCT	-27534587	True	NA	0	True	ATTAAA	-16	NA	27549913	27460612	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_27461563_27462293_27462487_27463540_27463593_27464319_27464837_27465259_27465541_27469290_27469551_27470107_27470396_27471747_27471921_27476450_27476545_27478468_27478532_27481078_27481192_27483043_27483126_27484210_27484354_27485996_27486155_27488226_27488416_27488553_27488636_27489042_27489179_27489601_27489744_27492337_27492516_27492616_27492714_27493198_27493297_27494762_27494909_27495210_27495493_27497636_27497822_27498629_27498734_27501190_27501345_27502858_27502996_27505898_27506117_27506846_27507157_27508539_27508656_27511748_27511902_27528597_27528722_27533290_27533388_27537783_27537928_27538179_27538357_27545313_27545524_27549669
transcript_73670.known	chr16	-	7015	37	FSM	ENSG00000077235.18	ENST00000561623.5	7015	37	0	0	0	0	multi-exon	FALSE	canonical	2	368	junction_24	71.1652788484683	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTTTTGTGTGTTTCCT	-27534587	True	NA	0	True	ATTAAA	-16	NA	27549913	27460612	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_27461563_27462293_27462487_27463540_27463593_27464394_27464837_27465259_27465541_27469290_27469551_27470107_27470396_27471747_27471921_27476450_27476545_27478468_27478532_27481078_27481192_27483043_27483126_27484210_27484354_27485996_27486155_27488226_27488416_27488553_27488636_27489042_27489179_27489601_27489744_27492337_27492516_27492616_27492714_27493198_27493297_27494762_27494909_27495210_27495493_27497636_27497822_27498629_27498734_27501190_27501345_27502858_27502996_27505898_27506117_27506846_27507157_27508539_27508656_27511748_27511902_27528597_27528722_27533290_27533388_27537783_27537928_27538179_27538357_27545313_27545524_27549669
transcript_73673.nic	chr16	-	3783	23	ISM	ENSG00000077235.18	ENST00000561623.5	7015	37	-61	27615	-61	-5090	5prime_fragment	FALSE	canonical	2	368	junction_10	60.2689049932957	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTATGTGGTGATCATTTT	NA	False	NA	21	True	AAGAAA	-1	NA	27549974	27488227	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_27488416_27488553_27488636_27489042_27489179_27489601_27489744_27492337_27492516_27492616_27492714_27493198_27493297_27494762_27494909_27495210_27495493_27497636_27497822_27498629_27498734_27501190_27501345_27502858_27502996_27505898_27506117_27506846_27507157_27508539_27508656_27511748_27511902_27528597_27528722_27533290_27533388_27537783_27537928_27538179_27538357_27545313_27545524_27549669
transcript_73675.nic	chr16	-	2383	14	ISM	ENSG00000077235.18	ENST00000561623.5	7015	37	-61	37075	-61	-14550	5prime_fragment	FALSE	canonical	2	368	junction_1	62.349368777737	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGATAATAAAATGGGCATA	NA	False	NA	NA	False	NA	NA	NA	27549974	27497687	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_27497822_27498629_27498734_27501190_27501345_27502858_27502996_27505898_27506117_27506846_27507157_27508539_27508656_27511748_27511902_27528597_27528722_27533290_27533388_27537783_27537928_27538179_27538357_27545313_27545524_27549669
transcript_73676.nic	chr16	-	2304	14	ISM	ENSG00000077235.18	ENST00000561623.5	7015	37	-61	37154	-61	-14629	5prime_fragment	FALSE	canonical	2	368	junction_1	62.349368777737	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAAGAGGGCCCAAGTGG	NA	False	NA	NA	False	NA	NA	NA	27549974	27497766	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_27497822_27498629_27498734_27501190_27501345_27502858_27502996_27505898_27506117_27506846_27507157_27508539_27508656_27511748_27511902_27528597_27528722_27533290_27533388_27537783_27537928_27538179_27538357_27545313_27545524_27549669
transcript_73677.nic	chr16	-	1854	11	ISM	ENSG00000077235.18	ENST00000561623.5	7015	37	0	42322	0	-19797	5prime_fragment	FALSE	canonical	3	449	junction_3	44.1824625841521	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACCGACTGCTGAAACGC	-27534587	True	NA	NA	False	NA	NA	NA	27549913	27502934	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_27502996_27505898_27506117_27506846_27507157_27508539_27508656_27511748_27511902_27528597_27528722_27533290_27533388_27537783_27537928_27538179_27538357_27545313_27545524_27549669
transcript_73678.nic	chr16	-	727	4	ISM	ENSG00000077235.18	ENST00000561623.5	7015	37	-61	77280	-61	-54755	5prime_fragment	FALSE	canonical	3	495	junction_1	52.6518966631044	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGAACAAAAACGGGCTG	NA	False	NA	NA	False	NA	NA	NA	27549974	27537892	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_27537928_27538179_27538357_27545313_27545524_27549669
transcript_73679.known	chr16	+	6624	28	FSM	ENSG00000047578.14	ENST00000261588.10	6599	28	0	-25	0	25	multi-exon	TRUE	canonical	3	11	junction_6	9.31936049896877	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCCGAGTCACCGGATTT	27548894	True	NA	NA	False	AATAAA	-18	NA	27550143	27780369	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_27550178_27573900_27573957_27618424_27618502_27628660_27628831_27631064_27631163_27648603_27648736_27677728_27677997_27681398_27681531_27698327_27698501_27699533_27699600_27701588_27701696_27703895_27703999_27708704_27708921_27721557_27721696_27740040_27740921_27749583_27750307_27751718_27751925_27754172_27754252_27761412_27761591_27766308_27766475_27769860_27770019_27771587_27771653_27773098_27773210_27774944_27775085_27776927_27777030_27777609_27777771_27777880_27777970_27778573
transcript_73687.known	chr16	-	4255	25	FSM	ENSG00000169180.12	ENST00000565698.5	4255	25	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_23	120.520853140304	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCTGGCTGGGGAGCTG	-28206139	False	NA	-3	True	AATAAA	-22	NA	28211550	28097978	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28098640_28101457_28101689_28101846_28101946_28104545_28104708_28106042_28106215_28106382_28106498_28107521_28107678_28111816_28112007_28112903_28113051_28117317_28117463_28121669_28121763_28125688_28125849_28132333_28132404_28133840_28133934_28135215_28135325_28146093_28146204_28152658_28152786_28156073_28156528_28166507_28166586_28169749_28169910_28175897_28176096_28177219_28177333_28180940_28181032_28208986_28209123_28211365
transcript_73688.known	chr16	-	4537	24	FSM	ENSG00000169180.12	ENST00000304658.10	4537	24	0	0	0	0	multi-exon	TRUE	canonical	3	146	junction_21	93.1873329214504	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTGGGGAGCTGCTT	-28206554	True	NA	0	True	AATAAA	-25	NA	28211965	28097975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28098640_28101457_28101689_28101846_28101946_28104545_28104708_28106042_28106215_28106382_28106498_28107521_28107678_28111816_28112007_28112903_28113051_28117317_28117463_28121669_28121763_28125688_28125849_28132333_28132404_28133840_28133934_28135215_28135325_28146093_28146204_28152658_28152786_28156073_28156528_28166507_28166586_28169749_28169910_28175897_28176096_28177219_28177333_28180940_28181032_28211365
transcript_73698.nic	chr16	-	4451	23	NIC	ENSG00000169180.12	novel	4537	24	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_22	105.250193851532	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTGGGGAGCTGCTT	-28206559	True	NA	0	True	AATAAA	-25	NA	28211970	28097975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_28098640_28101457_28101689_28101846_28101946_28104545_28104708_28106042_28106215_28106382_28106498_28107521_28107678_28111816_28112007_28112903_28113051_28117317_28117463_28121669_28121763_28125688_28125849_28132333_28132404_28133840_28133934_28135215_28135325_28146093_28146204_28152658_28152786_28156073_28156528_28166507_28166586_28169749_28169910_28175897_28176096_28177219_28177333_28211365
transcript_73699.nnic	chr16	-	4431	23	NIC	ENSG00000169180.12	novel	4537	24	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_21	104.177465005039	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTGGGGAGCTGCTT	-28206561	True	NA	0	True	AATAAA	-25	NA	28211972	28097975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_28098640_28101457_28101689_28101846_28101946_28104545_28104708_28106042_28106215_28106382_28106498_28107521_28107678_28111816_28112007_28112903_28113051_28117317_28117463_28121669_28121763_28125688_28125849_28132333_28132404_28133840_28133934_28135215_28135325_28146093_28146204_28152658_28152786_28156073_28156528_28166507_28166586_28169749_28169910_28175897_28176096_28180940_28181032_28211365
transcript_737.known	chr1	-	2001	10	FSM	ENSG00000162576.17	ENST00000445648.5	2001	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	18.483893555949	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTGTCCCAGGTATGCT	-1358391	True	NA	-8	True	AATAAA	-18	NA	1358543	1352691	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1353333_1353847_1353947_1354029_1354107_1354192_1354233_1354353_1354510_1354681_1355153_1355243_1355346_1355449_1355753_1356680_1356705_1358455
transcript_73714.known	chr16	+	4986	4	FSM	ENSG00000188322.8	ENST00000341901.5	4986	4	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_1	23.6126143312331	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGGGTGGCTGTCTTTT	28288776	True	NA	19	True	AATAAA	-20	NA	28292524	28323849	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28293301_28317384_28317618_28318994_28319198_28320075
transcript_73722.nnic	chr16	-	2967	21	NNC	ENSG00000205609.13	novel	2913	21	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	182	junction_20	686.130825717662	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGTTGATTGCTTGTT	-28403684	True	NA	NA	False	ACTAAA	-16	NA	28403846	28379714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_28379881_28379975_28380139_28380291_28380380_28380467_28380534_28380631_28380792_28383117_28383482_28388057_28388283_28388507_28388699_28390290_28390385_28390519_28390646_28390839_28390982_28391751_28391856_28391979_28392143_28399870_28399999_28400376_28400487_28400614_28400670_28400858_28400985_28401206_28401397_28401538_28401605_28403517_28403649_28403737
transcript_73723.known	chr16	-	2913	21	FSM	ENSG00000205609.13	ENST00000380876.5	2913	21	0	0	0	0	multi-exon	TRUE	canonical	3	2016	junction_13	408.871018782207	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGTTGATTGCTTGTT	-28403679	True	NA	NA	False	ACTAAA	-16	NA	28403841	28379714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28379881_28379975_28380139_28380291_28380380_28380467_28380534_28380631_28380792_28383117_28383482_28388057_28388283_28388507_28388699_28390290_28390385_28390519_28390646_28390839_28390982_28391751_28391856_28391979_28392143_28399870_28399999_28400376_28400487_28400614_28400670_28400858_28400985_28401206_28401397_28401538_28401605_28403517_28403649_28403786
transcript_73735.nic	chr16	-	485	5	ISM	ENSG00000205609.13	ENST00000380876.5	2913	21	-20	21247	-20	-21247	5prime_fragment	FALSE	canonical	3	2294	junction_4	222.021395365402	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGATGAACAAGAACA	NA	False	NA	NA	False	NA	NA	NA	28403861	28400961	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_28400985_28401206_28401397_28401538_28401605_28403517_28403649_28403786
transcript_73736.nic	chr16	-	462	4	ISM	ENSG00000205609.13	ENST00000380876.5	2913	21	-20	21492	-20	-21492	5prime_fragment	FALSE	canonical	3	2294	junction_3	256.243373898071	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGATGCCTATATTTATT	NA	False	NA	NA	False	NA	NA	NA	28403861	28401206	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_28401397_28401538_28401605_28403517_28403649_28403786
transcript_73738.known	chr16	-	1753	17	FSM	ENSG00000188603.22	ENST00000637184.1	1753	17	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	70.4939879972044	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAAATGCCGATTTTAT	-28490822	True	NA	-34	True	NA	NA	NA	28492047	28477305	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28477636_28477736_28477878_28479643_28479766_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491481_28491561_28491713_28491836_28492019
transcript_7374.known	chr1	+	2592	13	FSM	ENSG00000131236.18	ENST00000340450.7	2592	13	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_2	620.95777276362	3284	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGCTTAGTTGTTTAC	40000161	True	NA	17	True	AATAAA	-10	NA	40040752	40072641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40040802_40059336_40059459_40060069_40060171_40061734_40061813_40064226_40064371_40064473_40064560_40066214_40066321_40067539_40067718_40069689_40069875_40070158_40070283_40070429_40070513_40070835_40070980_40071449
transcript_73742.known	chr16	-	1685	16	FSM	ENSG00000188603.22	ENST00000636147.2	1685	16	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_15	44.538921805041	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTATATCGTTTTTGTC	-28490849	True	NA	-7	True	AATAAA	-20	NA	28492074	28477278	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491481_28491561_28491713_28491836_28492019
transcript_73747.known	chr16	-	1876	15	FSM	ENSG00000188603.22	ENST00000359984.12	1876	15	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_13	30.53143244833	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCGTTTTTGTCTCTAAAA	-28490849	True	NA	0	True	AATAAA	-27	NA	28492074	28477271	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491481_28491561_28491713
transcript_73749.known	chr16	-	1452	15	FSM	ENSG00000188603.22	ENST00000567963.6	1452	15	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_13	56.8205194324324	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGAACTGTGCTCCCAGC	-28490849	True	NA	NA	False	NA	NA	NA	28492074	28477432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491713_28491836_28492019
transcript_73751.known	chr16	-	1616	15	FSM	ENSG00000188603.22	ENST00000568452.6	1616	15	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_14	46.0940143973738	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCCAGAGACCCTCCATG	-28490821	True	NA	NA	False	NA	NA	NA	28492046	28477447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491481_28491561_28491713_28491836_28492019
transcript_73753.known	chr16	-	1720	14	FSM	ENSG00000188603.22	ENST00000357857.14	1720	14	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_13	47.7914602061817	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTATATCGTTTTTGT	-28490780	True	NA	-8	True	AATAAA	-19	NA	28492005	28477279	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491713
transcript_73754.known	chr16	-	1608	14	FSM	ENSG00000188603.22	ENST00000333496.14	1608	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_11	57.0594001714791	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGACTTCTTATATCGTT	-28491872	False	NA	-13	True	AATAAA	-14	NA	28491891	28477284	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28489289_28489387_28491481_28491561_28491713
transcript_73755.known	chr16	-	1536	14	FSM	ENSG00000188603.22	ENST00000636172.1	1536	14	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_10	55.5647710962823	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCGGGATCCTCAGGACG	-28490833	True	NA	NA	False	GGGGCT	-44	NA	28492058	28477515	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28488590_28488663_28489289_28489387_28491481_28491561_28491713
transcript_73756.known	chr16	-	1173	14	FSM	ENSG00000188603.22	ENST00000355477.10	1173	14	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	56.8143452174291	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCGGGATCCTCAGGACG	-28491740	False	1225	NA	False	GGGGCT	-44	NA	28491759	28477515	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491481_28491561_28491713
transcript_73757.known	chr16	-	1318	14	FSM	ENSG00000188603.22	ENST00000565316.6	1318	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	57.5611843244074	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGACACCCAGGCCCACC	-28491740	False	1225	NA	False	NA	NA	NA	28491759	28477463	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482607_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491481_28491561_28491713
transcript_73758.known	chr16	-	1957	14	FSM	ENSG00000188603.22	ENST00000561689.6	1957	14	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_12	31.6401736992068	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCATGGACTTCTTATAT	-28490819	True	NA	-17	True	AATAAA	-10	NA	28492044	28477288	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491481_28491561_28491713
transcript_73763.known	chr16	-	1577	13	FSM	ENSG00000188603.22	ENST00000637578.1	1577	13	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_10	68.151944212913	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGGCCAGCCATTGTCTC	-28490798	True	NA	-89	True	NA	NA	NA	28492023	28477360	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28488590_28488663_28489289_28489387_28491713
transcript_73766.known	chr16	-	1224	13	FSM	ENSG00000188603.22	ENST00000636228.1	1224	13	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	68.4110838160666	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGGGCAGAGGGACAGG	-28491837	False	NA	NA	False	NA	NA	NA	28491856	28477482	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491713
transcript_73768.known	chr16	-	1968	13	FSM	ENSG00000188603.22	ENST00000568076.6	1968	13	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_12	48.2760436333477	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATCCATGGACTTCT	-28490845	True	NA	-22	True	AATAAA	-5	NA	28492070	28477293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491481_28491561_28491713_28491836_28492019
transcript_73775.known	chr16	-	1469	12	FSM	ENSG00000188603.22	ENST00000357806.11	1469	12	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_7	75.5301920913443	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCCATGGACTTCTTAT	-28490758	True	NA	-19	True	AATAAA	-8	NA	28491983	28477290	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28487455_28487542_28488590_28488663_28489289_28489387_28491481_28491561_28491713
transcript_73777.known	chr16	-	1430	11	FSM	ENSG00000188603.22	ENST00000395653.9	1430	11	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_7	86.5230605099011	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCCATGGACTTCTTAT	-28490798	True	NA	-19	True	AATAAA	-8	NA	28492023	28477290	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28487455_28487542_28488590_28488663_28489289_28489387_28491713
transcript_73783.known	chr16	-	1653	11	FSM	ENSG00000196502.13	ENST00000564818.5	1653	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	20.2002475232359	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATATGATTGTGGGCCA	-28622980	False	NA	17	True	AATAAA	-31	NA	28623252	28605586	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28605934_28606055_28606237_28606760_28606856_28606950_28607078_28608290_28608389_28608477_28608604_28608707_28608860_28609362_28609436_28609930_28610192_28620062_28620134_28623130
transcript_73787.known	chr16	+	1159	10	FSM	ENSG00000176476.9	ENST00000317058.8	1159	10	0	0	0	0	multi-exon	TRUE	canonical	3	92	junction_1	9.76134983582107	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTCTCCTGGGTTTTACT	28552564	True	NA	5	True	ATTAAA	-16	NA	28553919	28591790	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28554098_28581054_28581145_28584912_28584989_28585647_28585721_28589099_28589165_28590095_28590226_28590295_28590443_28590630_28590667_28590772_28590936_28591589
transcript_73790.known	chr16	-	1876	10	FSM	ENSG00000196502.13	ENST00000562058.5	1876	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	16.947267524389	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAATAAAATATGATTGTG	-28623281	True	NA	12	True	AATAAA	-26	NA	28623553	28605591	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28605934_28606055_28606237_28606760_28606856_28606950_28607078_28608290_28608389_28608477_28608604_28608707_28608860_28609930_28610192_28620062_28620134_28623130
transcript_73793.nic	chr16	+	1814	9	ISM	ENSG00000176476.9	ENST00000317058.8	1159	10	-3	2	2	0	intron_retention	FALSE	canonical	3	92	junction_1	9.75881012214092	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCGTCTCCTGGGTTTTA	28552561	True	NA	3	True	ATTAAA	-14	NA	28553916	28591788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_28554098_28581054_28581145_28584912_28584989_28585647_28585721_28589099_28589165_28590095_28590226_28590295_28590443_28590630_28590667_28590772
transcript_73797.nnic	chr16	+	1062	9	NIC	ENSG00000176476.9	novel	1159	10	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	37.1146871197913	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCGTCTCCTGGGTTTTA	28552569	True	NA	3	True	ATTAAA	-14	NA	28553924	28591788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_28554098_28584912_28584989_28585647_28585721_28589099_28589165_28590095_28590226_28590295_28590443_28590630_28590667_28590772_28590936_28591589
transcript_73798.known	chr16	-	1651	9	FSM	ENSG00000196502.13	ENST00000563493.1	1651	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	19.061987698034	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAATAAAATAA	-28623353	True	NA	-24	True	NA	NA	NA	28623625	28605627	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28605934_28606055_28606237_28606760_28606856_28606950_28607078_28608290_28608389_28608477_28608604_28608707_28608860_28620062_28620134_28623130
transcript_738.known	chr1	-	2293	10	FSM	ENSG00000162576.17	ENST00000309212.11	2293	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	16.1986129569292	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTCCCAGGTATGCTT	-1358403	True	NA	-7	True	AATAAA	-19	NA	1358555	1352690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1353630_1353847_1353929_1354029_1354107_1354192_1354233_1354353_1354510_1354681_1355153_1355243_1355346_1355449_1355753_1356680_1356705_1358455
transcript_73808.known	chr16	-	1282	6	FSM	ENSG00000196502.13	ENST00000350842.8	1282	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	21.2884945451763	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATTGTGGGCCAGGCAG	-28623314	True	NA	22	True	AATAAA	-36	NA	28623586	28605581	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28605934_28606055_28606237_28606760_28606856_28606950_28607078_28620062_28620134_28623130
transcript_73809.known	chr16	+	764	3	FSM	ENSG00000176476.9	ENST00000564682.5	764	3	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	17	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATGATGGAGAAAAGGTAA	28552559	True	NA	NA	False	NA	NA	NA	28553914	28585403	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28554098_28581054_28581145_28584912
transcript_73810.known	chr16	-	5291	3	FSM	ENSG00000176046.9	ENST00000324873.8	5291	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGTCAATTACTCCTC	-28538943	True	NA	NA	False	AATGAA	-21	NA	28538974	28532707	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28537670_28538005_28538156_28538795
transcript_73811.known	chr16	-	432	1	FSM	ENSG00000275441.1	ENST00000613454.1	432	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGATTGCTGCTTGCTGG	-28553941	True	NA	1	True	AATAAA	-28	NA	28554140	28553708	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28553700_28554100
transcript_73831.known	chr16	+	2910	21	FSM	ENSG00000184110.15	ENST00000331666.11	2910	21	0	0	0	0	multi-exon	FALSE	canonical	3	2240	junction_1	321.704041006637	4555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGTTGATTGCTTGTT	28709627	True	NA	NA	False	ACTAAA	-16	NA	28711463	28735596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28711519_28711656_28711788_28713700_28713767_28713908_28714099_28714320_28714447_28714635_28714691_28714818_28714929_28715306_28715435_28723163_28723324_28723447_28723552_28724321_28724464_28724657_28724784_28724918_28725013_28726604_28726796_28727020_28727246_28731828_28732193_28734519_28734680_28734777_28734844_28734931_28735020_28735172_28735336_28735430
transcript_73838.known	chr16	+	3137	21	FSM	ENSG00000184110.15	ENST00000395587.5	3137	21	0	0	0	0	multi-exon	TRUE	canonical	3	181	junction_1	651.676336458521	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGAGCCTGCTGCTTTTTG	NA	False	NA	NA	False	NA	NA	NA	28711416	28735727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28711568_28711656_28711788_28713700_28713767_28713908_28714099_28714320_28714447_28714635_28714691_28714818_28714929_28715306_28715435_28723163_28723324_28723447_28723552_28724321_28724464_28724657_28724784_28724918_28725013_28726604_28726796_28727020_28727246_28731828_28732193_28734519_28734680_28734777_28734844_28734931_28735020_28735172_28735336_28735430
transcript_73872.known	chr16	+	2986	20	FSM	ENSG00000184110.15	ENST00000566866.5	2986	20	0	0	0	0	multi-exon	FALSE	canonical	3	2418	junction_7	300.301667349255	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTTGATTGCTTGTTG	28709690	True	NA	NA	False	ACTAAA	-17	NA	28711526	28735597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28711788_28713700_28713767_28713908_28714099_28714320_28714447_28714635_28714691_28714818_28714929_28715306_28715435_28723163_28723324_28723447_28723552_28724321_28724464_28724657_28724784_28724918_28725013_28726604_28726796_28727020_28727246_28731828_28732193_28734519_28734680_28734777_28734844_28734931_28735020_28735172_28735336_28735430
transcript_73874.nnic	chr16	+	4323	24	NIC	ENSG00000168488.19	novel	3981	24	NA	NA	-307	0	combination_of_known_splicesites	FALSE	canonical	3	119	junction_22	140.623550612148	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGAGTTTCCTCCT	NA	False	NA	24	True	AATAAA	-31	NA	28822691	28837237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_28823559_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836123_28836325_28836486_28836727
transcript_73877.nic	chr16	+	4200	24	NIC	ENSG00000168488.19	novel	3807	23	NA	NA	-307	0	combination_of_known_junctions	FALSE	canonical	3	120	junction_22	140.501787757128	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGAGTTTCCTCCT	NA	False	NA	24	True	AATAAA	-31	NA	28822691	28837237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_28823559_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836123_28836448_28836486_28836727
transcript_73879.known	chr16	+	3981	24	FSM	ENSG00000168488.19	ENST00000395547.6	3981	24	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_22	163.73558609847	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGAGTTTCCTCCT	28822819	False	NA	24	True	AATAAA	-31	NA	28823092	28837237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28823559_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836177_28836325_28836491_28836727
transcript_73886.nnic	chr16	+	3967	24	NIC	ENSG00000168488.19	novel	3264	15	NA	NA	-106	0	combination_of_known_splicesites	FALSE	canonical	3	119	junction_22	149.232225369881	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGAGTTTCCTCCT	28823997	False	NA	24	True	AATAAA	-31	NA	28824031	28837237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_28824543_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836123_28836325_28836486_28836727
transcript_73888.nic	chr16	+	3844	24	NIC	ENSG00000168488.19	novel	3264	15	NA	NA	-106	0	combination_of_known_junctions	FALSE	canonical	3	120	junction_22	149.118759842154	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGAGTTTCCTCCT	28823997	False	NA	24	True	AATAAA	-31	NA	28824031	28837237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_28824543_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836123_28836448_28836486_28836727
transcript_73897.known	chr16	+	3807	23	FSM	ENSG00000168488.19	ENST00000340394.12	3807	23	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_22	114.271823240801	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGAGTTTCCTCCT	28823005	False	NA	24	True	AATAAA	-31	NA	28823047	28837237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28823559_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836123_28836727
transcript_73898.known	chr16	+	3739	23	FSM	ENSG00000168488.19	ENST00000382686.8	3739	23	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_22	130.277516882072	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGAGTTTCCTCCT	28822819	False	NA	24	True	AATAAA	-31	NA	28823092	28837237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28823559_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836123_28836750
transcript_73899.known	chr16	+	3635	23	FSM	ENSG00000168488.19	ENST00000570200.5	3635	23	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_22	135.022350460829	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAATTTTAAACTAACTT	28822530	True	NA	2	True	AATAAA	-9	NA	28823251	28837215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28823559_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836177_28836727
transcript_73900.known	chr16	+	3788	23	FSM	ENSG00000168488.19	ENST00000325215.10	3788	23	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_22	139.193337211114	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACCTGCCTGGAGTTTC	28822819	False	NA	19	True	AATAAA	-26	NA	28823092	28837232	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28823559_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836177_28836750
transcript_73909.nic	chr16	+	3807	23	NIC	ENSG00000168488.19	novel	3264	15	NA	NA	-106	0	combination_of_known_junctions	FALSE	canonical	3	167	junction_22	125.823699300987	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGAGTTTCCTCCT	28823997	False	NA	24	True	AATAAA	-31	NA	28824031	28837237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_28824543_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836123_28836727
transcript_73910.nic	chr16	+	3784	23	NIC	ENSG00000168488.19	novel	3264	15	NA	NA	-106	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_22	140.366698035379	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGAGTTTCCTCCT	28823997	False	NA	24	True	AATAAA	-31	NA	28824031	28837237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_28824543_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932_28836123_28836750
transcript_73919.known	chr16	+	4456	22	FSM	ENSG00000168488.19	ENST00000336783.9	4456	22	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_1	84.0051828656977	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACCTGCCTGGAGTTTC	28822949	False	NA	19	True	AATAAA	-26	NA	28822998	28837232	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28823559_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932
transcript_73927.nic	chr16	+	4396	22	NIC	ENSG00000168488.19	novel	3264	15	NA	NA	-106	0	intron_retention	FALSE	canonical	3	174	junction_1	100.631565714445	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAACTAACTTAACCTG	28823997	False	NA	8	True	AATAAA	-15	NA	28824031	28837221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_28824543_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835400_28835548_28835759_28835932
transcript_73936.known	chr16	+	4574	21	FSM	ENSG00000168488.19	ENST00000563314.5	4574	21	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_1	85.6448480645508	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGAGTTTCCTCCT	28822754	False	NA	24	True	AATAAA	-31	NA	28823034	28837237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28823559_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614_28830791_28830961_28831073_28832204_28832400_28832495_28832568_28832816_28832888_28833058_28833355_28833438_28833509_28834064_28834212_28834342_28834416_28834505_28834694_28835057_28835188_28835277_28835759_28835932
transcript_73951.known	chr16	+	1294	9	FSM	ENSG00000168488.19	ENST00000568266.5	1294	9	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	121.794909581641	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCCGTGGTATCAATGG	28822214	False	NA	NA	False	NA	NA	NA	28824137	28830768	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28824543_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614
transcript_73958.known	chr16	-	2011	10	FSM	ENSG00000178952.11	ENST00000313511.8	2011	10	0	0	0	0	multi-exon	TRUE	canonical	3	1525	junction_5	125.839403827083	4707	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATTTCTCAGTGAAGTT	-28813612	True	NA	-11	True	AATAAA	-16	NA	28846348	28842410	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28843149_28843735_28843856_28843949_28844102_28844229_28844335_28844418_28844552_28844697_28844863_28844950_28845056_28845313_28845481_28845911_28846107_28846217
transcript_74.known	SIRV1	+	702	3	FSM	SIRV1B	SIRV108	702	3	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	19.5	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAAGACATAGGGCGTGG	NA	False	NA	NA	False	NA	NA	NA	10582	11606	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV1_+_10792_10897_11188_11403
transcript_740.known	chr1	-	2231	9	FSM	ENSG00000162576.17	ENST00000342753.8	2231	9	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_7	18.0208212909401	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCCAGGTATGCTTCT	NA	False	NA	-5	True	AATAAA	-21	NA	1358794	1352688	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1353630_1353847_1353929_1354029_1354107_1354192_1354233_1354353_1354510_1354681_1355153_1355243_1355346_1356680_1356705_1358455
transcript_74012.nic	chr16	+	3240	10	NIC	ENSG00000178188.15	novel	3095	11	NA	NA	-205	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	41.9402867696561	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCGTGATGGCTATGGCCA	NA	False	NA	21	True	AATAAA	-22	NA	28863353	28874205	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_28863755_28866011_28867034_28867330_28867433_28869005_28869098_28869207_28869384_28871779_28871984_28872189_28872402_28872533_28872706_28873169_28873270_28873446
transcript_74017.nic	chr16	+	2994	10	NIC	ENSG00000178188.15	novel	3033	10	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_1	24.0097716732681	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCGTGATGGCTATGGCCA	28863637	False	NA	21	True	AATAAA	-22	NA	28863790	28874205	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_28863946_28866011_28867034_28867330_28867433_28869005_28869098_28869207_28869384_28871779_28871984_28872189_28872402_28872533_28872706_28873169_28873270_28873446
transcript_74018.known	chr16	+	3033	10	FSM	ENSG00000178188.15	ENST00000359285.9	3033	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_8	39.3279971270429	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCGTGATGGCTATGGCCA	28863704	True	NA	21	True	AATAAA	-22	NA	28863804	28874205	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28863946_28866011_28867034_28867330_28867433_28869005_28869098_28869207_28869384_28871779_28871984_28872189_28872402_28872533_28872759_28873169_28873270_28873446
transcript_74027.nnic	chr16	+	4498	10	NNC	ENSG00000178188.15	novel	2529	10	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	41.39630805987	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCGTGATGGCTATGGCCA	28863860	True	NA	21	True	AATAAA	-22	NA	28863965	28874205	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_28865625_28866011_28867034_28867330_28867433_28869005_28869098_28869207_28869384_28871779_28871984_28872189_28872402_28872533_28872706_28873169_28873270_28873446
transcript_74029.known	chr16	+	2529	10	FSM	ENSG00000178188.15	ENST00000395532.8	2529	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	44.1386703721603	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTCCCGGAAGAGCTGGT	28863948	True	NA	NA	False	NA	NA	NA	28863974	28873607	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28864263_28866011_28867034_28867330_28867433_28869005_28869098_28869207_28869384_28871779_28871984_28872189_28872402_28872533_28872706_28873169_28873270_28873446
transcript_74044.known	chr16	+	1532	9	FSM	ENSG00000178188.15	ENST00000538342.5	1532	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	44.2210357183095	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCACCCGCTCCACCCT	28863705	True	NA	NA	False	NA	NA	NA	28863805	28873823	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28863946_28867373_28867433_28869005_28869098_28869207_28869384_28871779_28871984_28872189_28872402_28872533_28872706_28873169_28873270_28873446
transcript_74053.nic	chr16	+	3115	20	NIC	ENSG00000196296.14	novel	3130	21	NA	NA	-27	0	combination_of_known_junctions	TRUE	canonical	2	6	junction_1	5.45645060323976	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTTGCCTCTGTGCAAG	28879813	True	NA	4	True	AATAAA	-14	NA	28880025	28904464	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_28880095_28880914_28881020_28882450_28882590_28884574_28884656_28887188_28887275_28887424_28887723_28888786_28888954_28894154_28894244_28894504_28894608_28894821_28894954_28897999_28898126_28898232_28898452_28900580_28900917_28901862_28902084_28902183_28902387_28902579_28902666_28902777_28902912_28903029_28903148_28903322_28903441_28904179
transcript_74059.known	chr16	-	2307	13	FSM	ENSG00000177548.13	ENST00000358201.9	2307	13	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_4	10.8892786211433	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGTCGCCTTGTCCCTGC	-28924591	True	NA	-6	True	AATAAA	-17	NA	28925238	28904420	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28905045_28905396_28905514_28905703_28905760_28905866_28905879_28906018_28906197_28908608_28908765_28910887_28910987_28911083_28911180_28914235_28914587_28914671_28914783_28919785_28919944_28924402_28924616_28925102
transcript_74062.nic	chr16	-	2387	12	ISM	ENSG00000177548.13	ENST00000358201.9	2307	13	407	0	-4	0	3prime_fragment	TRUE	canonical	3	66	junction_4	10.4050210384178	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGTCGCCTTGTCCCTGC	-28924778	False	NA	-6	True	AATAAA	-17	NA	28924831	28904420	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_28905045_28905396_28905514_28905703_28905760_28905866_28905879_28906018_28906197_28908608_28908765_28910887_28910987_28911083_28911180_28914235_28914587_28914671_28914783_28919785_28919944_28924402
transcript_74064.known	chr16	-	1645	12	FSM	ENSG00000177548.13	ENST00000544477.5	1645	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_11	26.4693804078137	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGGACTGACGGGGGCCA	-28924549	True	NA	NA	False	NA	NA	NA	28925196	28904827	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28905045_28905396_28905514_28905703_28905760_28905866_28905879_28906018_28906197_28908608_28908765_28910887_28910987_28911083_28911180_28914235_28914587_28914671_28914783_28919785_28919944_28925102
transcript_74077.nic	chr16	+	1040	8	ISM	ENSG00000177455.15	ENST00000538922.8	1918	15	4814	2	-14	0	3prime_fragment	FALSE	canonical	2	9	junction_5	1.92724822331886	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCTATGAAGTAGTGCCA	28936742	True	NA	36	True	AATAAA	-17	NA	28936784	28939340	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_28937137_28937270_28937376_28937454_28937524_28937623_28937681_28937768_28937826_28938675_28938769_28938871_28938979_28939140
transcript_74083.nnic	chr16	-	923	3	FSM	ENSG00000260442.6	ENST00000686287.1	437	3	-486	0	-486	0	multi-exon	FALSE	canonical	3	50	junction_1	28.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGGGACTCTGTTTTCTC	NA	False	NA	-7	True	ATTAAA	-19	NA	28880424	28878956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28879108_28879541_28879756_28879866
transcript_74084.known	chr16	-	558	2	FSM	ENSG00000260442.6	ENST00000561547.5	558	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGGGACTCTGTTTTCTC	-28878160	True	NA	-7	True	ATTAAA	-19	NA	28879895	28878956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28879108_28879488
transcript_74085.known	chr16	-	530	2	FSM	ENSG00000260442.6	ENST00000566956.2	546	2	16	0	16	0	multi-exon	FALSE	canonical	3	50	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGGGACTCTGTTTTCTC	-28878185	True	NA	-7	True	ATTAAA	-19	NA	28879920	28878956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_28879108_28879541
transcript_74092.known	chr16	+	4569	8	FSM	ENSG00000176953.13	ENST00000320805.9	4564	8	0	-5	0	5	multi-exon	FALSE	canonical	3	186	junction_3	20.4759689910502	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATACTGGAGGATTTTTGT	28950904	False	NA	8	True	AATAAA	-21	NA	28950936	28967097	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28951399_28952131_28952205_28954564_28954683_28955977_28956059_28956150_28956338_28958716_28958862_28958990_28959101_28963704
transcript_74133.known	chr16	+	823	2	FSM	ENSG00000176953.13	ENST00000565752.5	823	2	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGATGCATTTTTTGCAA	28944882	True	NA	NA	False	NA	NA	NA	28951006	28952562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28951399_28952131
transcript_74148.known	chr16	+	2102	13	FSM	ENSG00000169682.18	ENST00000323081.12	2102	13	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	150.148445065394	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGGTGCCTGCTCTCGT	28970145	True	NA	13	True	AATAAA	-14	NA	28974793	28984543	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28975101_28975187_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28981900_28982057_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
transcript_74150.known	chr16	+	1979	13	FSM	ENSG00000169682.18	ENST00000565975.5	1979	13	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	136.421808088818	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCCTGCTCTCGTCTTTC	28970123	True	NA	18	True	AATAAA	-19	NA	28974771	28984548	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28974864_28975100_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28981900_28982057_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
transcript_74151.nic	chr16	+	2118	13	NIC	ENSG00000169682.18	novel	2102	13	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	53	junction_1	153.940171459203	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCCAGGTGCCTGCTCT	28970130	True	NA	10	True	AATAAA	-11	NA	28974778	28984540	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_28975101_28975183_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28981900_28982057_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
transcript_74154.known	chr16	+	2205	12	FSM	ENSG00000169682.18	ENST00000311008.16	2205	12	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_6	64.2088534355203	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGGTGCCTGCTCTCGT	28970129	True	NA	13	True	AATAAA	-14	NA	28974777	28984543	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28981900_28982057_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
transcript_74168.known	chr16	+	2027	11	FSM	ENSG00000169682.18	ENST00000334536.12	2027	11	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_6	162.500492306947	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGGTGCCTGCTCTCGTC	28970152	True	NA	14	True	AATAAA	-15	NA	28974800	28984544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
transcript_7417.known	chr1	-	2368	10	FSM	ENSG00000131238.18	ENST00000641471.1	2368	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	653.952163463632	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGTTTTCAGTATTTT	-40082194	True	NA	-15	True	AATAAA	-16	NA	40097247	40072709	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_40074184_40076841_40076914_40078559_40078659_40080396_40080488_40089409_40089513_40091328_40091400_40092044_40092173_40092397_40092508_40093932_40094020_40097114
transcript_74184.known	chr16	+	2253	5	FSM	ENSG00000169682.18	ENST00000568900.5	2253	5	0	0	0	0	multi-exon	FALSE	canonical	3	481	junction_3	39.350984739902	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATACAAAAAAAAATTA	28970129	True	NA	NA	False	NA	NA	NA	28974777	28980687	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404
transcript_74187.known	chr16	-	1840	2	FSM	ENSG00000260908.1	ENST00000562618.1	1840	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	29107711	29103656	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_29105140_29107354
transcript_74196.known	chr16	+	1356	8	FSM	ENSG00000213648.11	ENST00000360423.12	1356	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	63.3986415871984	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTCATGTAGAGCCT	NA	False	NA	NA	False	AATAAA	-19	NA	29459912	29464966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29459986_29461381_29461534_29461637_29461764_29461852_29461951_29463344_29463472_29463566_29463662_29464159_29464341_29464462
transcript_74199.known	chr16	+	1165	6	FSM	ENSG00000181625.17	ENST00000330181.9	1165	6	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_2	61.9096115316515	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGCCTTATGGTGGATGC	NA	False	NA	NA	False	AATAAA	-14	NA	29454500	29458219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29454931_29455397_29455450_29455543_29455886_29457631_29457760_29457927_29458016_29458094
transcript_7420.known	chr1	-	2267	9	FSM	ENSG00000131238.18	ENST00000433473.8	2267	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	525.556609700611	2367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTAGTTTCTTATCCTTG	-40082199	True	NA	-31	True	NA	NA	NA	40097252	40072725	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_40074184_40076841_40076914_40078559_40078659_40080396_40080488_40089409_40089513_40091328_40091400_40092044_40092173_40092397_40092505_40097114
transcript_74205.known	chr16	+	762	5	FSM	ENSG00000181625.17	ENST00000351581.4	762	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	237.075278129121	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGCCTTATGGTGGATGC	NA	False	NA	NA	False	AATAAA	-14	NA	29454561	29458219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29454931_29455397_29455450_29457631_29457760_29457927_29458016_29458094
transcript_74208.known	chr16	-	937	5	FSM	ENSG00000261740.7	ENST00000569622.6	937	5	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_3	1062.21066648759	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATCTTGATAAGTTTTT	NA	False	NA	NA	False	NA	NA	NA	29454347	29443229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_29443689_29444397_29444500_29446801_29446923_29454015_29454114_29454190
transcript_7421.known	chr1	-	2340	9	FSM	ENSG00000131238.18	ENST00000530704.6	2340	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	537.675886919806	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTAGTTTCTTATCCTTG	-40082199	True	NA	-31	True	NA	NA	NA	40097252	40072725	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_40074184_40076841_40076914_40078559_40078659_40080396_40080488_40089409_40089583_40091328_40091400_40092044_40092173_40092397_40092508_40097114
transcript_74210.known	chr16	-	1305	5	FSM	ENSG00000261740.7	ENST00000568556.2	1305	5	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_3	1069.69537135579	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTGCCATTATATTTA	NA	False	NA	NA	False	AATAAA	-14	NA	29454651	29443269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_29443689_29444397_29444500_29446801_29447027_29454015_29454114_29454190
transcript_74214.known	chr16	-	1012	3	FSM	ENSG00000183336.9	ENST00000330978.4	399	3	-613	0	-613	0	multi-exon	FALSE	canonical	3	2524	junction_1	158.5	317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTTCTGTGTCGATGTG	NA	False	NA	NA	False	ATTAAA	-14	NA	29454964	29453592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_29453733_29454015_29454114_29454190
transcript_74215.nnic	chr16	-	2538	14	Fusion	ENSG00000205534.6_ENSG00000279583.1	novel	4221	29	NA	NA	-436	-17446	multi-exon	TRUE	canonical	2	3	junction_13	158.593111918295	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACGTTTCTTCTTTTTCCT	NA	False	NA	NA	False	AATAAA	-32	NA	29595402	29545013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr16_-_29545451_29546165_29546268_29548537_29548763_29551188_29551362_29553085_29553184_29554415_29554489_29554866_29554993_29558664_29558879_29560156_29560216_29561514_29561652_29565350_29565507_29566085_29566250_29569270_29569329_29594886
transcript_74216.nnic	chr16	-	2646	14	Fusion	ENSG00000205534.6_ENSG00000260727.2	novel	4221	29	NA	NA	-86	-17446	multi-exon	FALSE	canonical	3	19	junction_13	157.463811941049	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACGTTTCTTCTTTTTCCT	-29612493	True	NA	NA	False	AATAAA	-32	NA	29613726	29545013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr16_-_29545451_29546165_29546268_29548537_29548763_29551188_29551362_29553085_29553184_29554415_29554489_29554866_29554993_29558664_29558879_29560156_29560216_29561514_29561652_29565350_29565507_29566085_29566250_29569270_29569329_29613102
transcript_74218.nnic	chr16	-	2645	13	Fusion	ENSG00000205534.6_ENSG00000260727.2	novel	4221	29	NA	NA	-143	-17446	multi-exon	FALSE	canonical	3	32	junction_12	158.152067292492	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACGTTTCTTCTTTTTCCT	NA	False	NA	NA	False	AATAAA	-32	NA	29613783	29545013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr16_-_29545451_29546165_29546268_29548537_29548763_29551188_29551362_29553085_29553184_29554415_29554489_29554866_29554993_29558664_29558879_29560156_29560216_29561514_29561652_29565350_29565507_29566085_29566250_29613102
transcript_74233.known	chr16	+	913	3	FSM	ENSG00000103485.19	ENST00000219771.7	913	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	532	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTTTGAGACCAGCCTGG	29667607	True	NA	NA	False	NA	NA	NA	29679007	29697776	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29679211_29696995_29697128_29697198
transcript_74241.known	chr16	+	7252	2	FSM	ENSG00000197471.12	ENST00000652691.1	7252	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGGTCAAAAAGGTGTTC	29663018	True	NA	20	True	AATAAA	-29	NA	29663246	29670876	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29663317_29663694
transcript_74243.known	chr16	+	2200	4	FSM	ENSG00000103485.19	ENST00000395384.9	2200	4	0	0	0	0	multi-exon	FALSE	canonical	3	847	junction_2	116.121583791396	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGTGCCTGAGGAGTTTT	29667779	True	NA	17	True	AATAAA	-17	NA	29679179	29698699	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29679211_29694663_29695200_29696995_29697128_29697198
transcript_74244.known	chr16	+	1935	2	FSM	ENSG00000197471.12	ENST00000395389.2	1935	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCATTTCCCCCTCTTTC	NA	False	NA	18	True	AATAAA	-30	NA	29662978	29665527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29663081_29663694
transcript_7426.known	chr1	-	2195	8	FSM	ENSG00000131238.18	ENST00000439754.6	2195	8	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	549.343950098847	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGAGTAGTTTCTTATCC	-40082199	True	NA	-34	True	NA	NA	NA	40097252	40072728	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_40074184_40078559_40078659_40080396_40080488_40089409_40089513_40091328_40091400_40092044_40092173_40092397_40092508_40097114
transcript_7427.known	chr1	-	1957	6	FSM	ENSG00000131238.18	ENST00000449045.7	1957	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	627.032885899934	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTCTAAAATAAAGAGTAGT	-40082207	True	NA	-43	True	NA	NA	NA	40097260	40072737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_40074184_40076841_40076914_40078559_40078659_40080396_40080488_40089409_40089513_40097114
transcript_74273.known	chr16	+	2081	14	FSM	ENSG00000079616.14	ENST00000160827.9	2081	14	0	0	0	0	multi-exon	FALSE	canonical	3	1578	junction_8	90.1627719393486	4140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCGCCTGATTTTTGGG	29770461	True	NA	24	True	AATACA	-15	NA	29790750	29805384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29790830_29796892_29797089_29798373_29798502_29798592_29798748_29798974_29799185_29799263_29799495_29799627_29799782_29799912_29800049_29802768_29802938_29803448_29803609_29803997_29804066_29804813_29805027_29805114_29805175_29805262
transcript_74284.known	chr16	+	2505	14	FSM	ENSG00000079616.14	ENST00000561482.6	2256	14	-249	0	-8	0	multi-exon	FALSE	canonical	0	0	junction_1	464.071701764607	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCGCCTGATTTTTGGG	29770429	True	NA	24	True	AATACA	-15	NA	29790718	29805384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29791222_29796892_29797089_29798373_29798502_29798592_29798748_29798974_29799185_29799263_29799495_29799627_29799782_29799912_29800049_29802768_29802938_29803448_29803609_29803997_29804066_29804813_29805027_29805114_29805175_29805262
transcript_74285.known	chr16	+	2493	14	FSM	ENSG00000079616.14	ENST00000400751.9	2493	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	464.071701764607	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCGCCTGATTTTTGGG	29770681	False	NA	24	True	AATACA	-15	NA	29790970	29805384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29791462_29796892_29797089_29798373_29798502_29798592_29798748_29798974_29799185_29799263_29799495_29799627_29799782_29799912_29800049_29802768_29802938_29803448_29803609_29803997_29804066_29804813_29805027_29805114_29805175_29805262
transcript_74294.nic	chr16	+	2875	13	FSM	ENSG00000079616.14	ENST00000691169.1	2853	13	-22	0	-22	0	multi-exon	TRUE	canonical	3	1578	junction_8	89.9948686808803	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCGCCTGATTTTTGGG	NA	False	NA	24	True	AATACA	-15	NA	29790704	29805384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29790830_29796892_29797089_29798373_29798502_29798592_29798748_29798974_29799185_29799263_29799495_29799627_29799782_29799912_29800049_29802768_29802938_29803448_29803609_29803997_29805027_29805114_29805175_29805262
transcript_7432.known	chr1	-	588	6	FSM	ENSG00000131238.18	ENST00000372779.9	588	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	636.977550624824	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTATCGCAACCACAGC	-40082192	True	NA	NA	False	CATAAA	-6	NA	40097245	40080446	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_40080488_40089409_40089513_40091328_40091400_40092044_40092173_40092397_40092508_40097110
transcript_74375.known	chr16	+	2333	6	FSM	ENSG00000103495.15	ENST00000545521.5	2333	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	388.624034254188	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTCTGGCTCTGGATT	29805264	True	NA	7	True	AATAAA	-14	NA	29806105	29811160	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29806181_29806806_29806894_29806977_29807829_29808229_29808294_29808569_29808742_29810076
transcript_7439.known	chr1	+	6232	8	FSM	ENSG00000117000.9	ENST00000372771.5	6232	8	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_6	21.2362800847214	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTTGTTTACTCATAATG	40156794	True	NA	7	True	AATAAA	-18	NA	40161386	40240921	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40161637_40189054_40189210_40190771_40190854_40195631_40195765_40202411_40202615_40222573_40222711_40231516_40231659_40235791
transcript_74391.known	chr16	+	2462	4	FSM	ENSG00000167371.21	ENST00000358758.12	2462	4	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_3	42.0502345085283	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGCCTCCAATCTCGGTTG	29810476	True	NA	6	True	AATAAA	-17	NA	29812192	29815881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29812324_29812989_29813934_29814332_29814466_29814627
transcript_74396.known	chr16	+	1470	3	FSM	ENSG00000167371.21	ENST00000567659.3	1470	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	25.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGCCCCCACCCCTAAG	29810474	True	NA	NA	False	NA	NA	NA	29812190	29814725	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29812324_29812989_29813934_29814332
transcript_74400.nic	chr16	+	1255	2	NIC	ENSG00000103495.15	novel	1461	3	NA	NA	213	0	intron_retention	FALSE	canonical	0	0	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGTTTCTGGCTCTGGA	29799165	True	NA	5	True	AATAAA	-12	NA	29806860	29811158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_29807067_29810109
transcript_74402.known	chr16	+	2867	2	FSM	ENSG00000167371.21	ENST00000647876.1	2867	2	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTACAACGCGGTTCGGA	29812136	False	NA	-28	True	NA	NA	NA	29812149	29815682	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29812324_29812989
transcript_74404.known	chr16	+	1461	3	FSM	ENSG00000103495.15	ENST00000563402.1	1461	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	384.5	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGTTTCTGGCTCTGGA	29799463	False	NA	5	True	AATAAA	-12	NA	29806570	29811158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29806894_29806977_29807067_29810109
transcript_74405.known	chr16	+	2698	6	FSM	ENSG00000103495.15	ENST00000219782.10	2698	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	410.895899225096	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGCTCTGGATTGAAT	29799488	False	NA	11	True	AATAAA	-18	NA	29806595	29811164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29806894_29806977_29807829_29808229_29808294_29808569_29808742_29809539_29809765_29810076
transcript_74406.known	chr16	+	1464	3	FSM	ENSG00000103495.15	ENST00000568544.5	1464	3	0	0	0	0	multi-exon	FALSE	canonical	3	669	junction_2	239	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGCGGACCCCATTACAATA	29807265	True	NA	-28	True	NA	NA	NA	29808050	29811125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29808294_29808569_29808742_29810076
transcript_74407.known	chr16	+	1593	4	FSM	ENSG00000103495.15	ENST00000568282.1	1593	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	468.865533910191	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGACCCCATTACAATAAAT	29807360	False	NA	-25	True	NA	NA	NA	29808145	29811128	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29808294_29808569_29808742_29809539_29809772_29810087
transcript_74408.known	chr16	+	3002	2	FSM	ENSG00000167371.21	ENST00000300797.7	3002	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGCCTCCAATCTCGGTT	29810524	True	NA	5	True	AATAAA	-16	NA	29812240	29815880	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29812352_29812989
transcript_74409.known	chr16	+	3874	3	FSM	ENSG00000280789.2	ENST00000320330.8	3874	3	0	0	0	0	multi-exon	FALSE	canonical	3	924	junction_1	22	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAAGTTGTGTCCTTGTT	29813323	True	NA	19	True	NA	NA	NA	29816151	29822489	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29817008_29817209_29817293_29819554
transcript_74410.known	chr16	+	2798	15	FSM	ENSG00000013364.19	ENST00000357402.10	2798	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.37974369781684	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACAATTTCAACACTTTT	29820451	False	NA	10	True	AATACA	-18	NA	29820461	29848021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29820511_29830514_29830675_29830877_29831074_29833732_29833857_29833934_29834067_29835703_29835799_29836721_29836959_29840177_29840460_29841595_29841841_29841914_29842113_29844492_29844880_29845862_29845980_29846157_29846285_29847196_29847386_29847761
transcript_74411.known	chr16	-	1015	6	FSM	ENSG00000103502.14	ENST00000564296.5	1015	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	185.59137911013	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTGCTGTGCCACACAG	-29857649	True	NA	NA	False	NA	NA	NA	29863276	29859149	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_29859335_29859441_29859524_29860580_29860663_29861105_29861260_29862585_29862636_29862814
transcript_74412.known	chr16	-	1843	6	FSM	ENSG00000103502.14	ENST00000219789.11	1843	6	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_5	32.124756808418	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTTCTCAGAGTGTGG	-29857599	True	NA	-11	True	AATAAA	-18	NA	29863226	29858356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_29859335_29859441_29859524_29860580_29860663_29861105_29861260_29862585_29862721_29862814
transcript_74414.known	chr16	-	1671	5	FSM	ENSG00000103502.14	ENST00000566113.5	1671	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	205.74255758107	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTCTGTCAATGAGTTGG	-29857577	True	NA	-26	True	AATAAA	-3	NA	29863204	29858371	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_29859335_29859441_29859524_29860580_29860663_29861105_29861260_29862814
transcript_74417.known	chr16	-	1047	5	FSM	ENSG00000103502.14	ENST00000563415.1	1047	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	203.143268409268	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCCTGGCGGGACTTCAC	-29862866	False	NA	NA	False	NA	NA	NA	29862890	29858734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_29859335_29860580_29860663_29861105_29861260_29862585_29862721_29862814
transcript_74420.known	chr16	-	3173	18	FSM	ENSG00000174938.15	ENST00000350527.7	3173	18	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_16	85.9293586108978	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGCCGGTGGAGTGTGGG	-29897560	False	NA	-11	True	AATAAA	-21	NA	29899090	29871158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_29871729_29872186_29872284_29872408_29872527_29872704_29872744_29873239_29873432_29873537_29873730_29876755_29876951_29877270_29877468_29878286_29878426_29879863_29880065_29885585_29885750_29887648_29887818_29888539_29888726_29895258_29895461_29895720_29895861_29896821_29896912_29897852_29897985_29898940
transcript_74422.known	chr16	-	3843	18	FSM	ENSG00000174938.15	ENST00000617533.5	3843	18	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_12	63.5101822749326	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGCCGGTGGAGTGTGGG	NA	False	NA	-11	True	AATAAA	-21	NA	29899550	29871158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_29871729_29872186_29872284_29872408_29872527_29872704_29872744_29873239_29873432_29873537_29873730_29876755_29876951_29877270_29877468_29878286_29878426_29879863_29880065_29885585_29885750_29887648_29887818_29888539_29888726_29895258_29895461_29895720_29895861_29896821_29897122_29897852_29897985_29898940
transcript_74427.known	chr16	-	3801	17	FSM	ENSG00000174938.15	ENST00000308713.9	3801	17	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	78.3250438876353	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGCCGGTGGAGTGTGGG	NA	False	NA	-11	True	AATAAA	-21	NA	29899547	29871158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_29871729_29872186_29872284_29872408_29872527_29873239_29873432_29873537_29873730_29876755_29876951_29877270_29877468_29878286_29878426_29879863_29880065_29885585_29885750_29887648_29887818_29888539_29888726_29895258_29895461_29895720_29895861_29896821_29897122_29897852_29897985_29898940
transcript_74429.known	chr16	-	3015	16	FSM	ENSG00000174938.15	ENST00000346932.9	3015	16	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_13	87.154422339508	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGCCGGTGGAGTGTGGG	-29897534	False	1530	-11	True	AATAAA	-21	NA	29899064	29871158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_29871729_29872186_29872284_29872408_29872527_29872704_29872744_29873239_29873432_29873537_29873730_29876755_29876951_29877270_29877468_29878286_29878426_29879863_29880065_29885585_29885750_29887648_29887818_29888539_29888726_29896821_29897122_29897852_29897985_29898940
transcript_74438.known	chr16	-	1716	6	FSM	ENSG00000174943.11	ENST00000568000.6	1716	6	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	15.6588633048507	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGCTGGCTCCTGGGGA	-29924488	True	NA	-5	True	AATAAA	-15	NA	29926226	29906338	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_29907109_29910977_29911174_29911814_29911868_29911959_29912050_29923189_29923360_29925789
transcript_74439.nic	chr16	-	1162	6	NIC	ENSG00000174943.11	novel	1716	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	42.0218990527558	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAGTTGAGAAACTGGTG	-29924490	True	NA	-19	True	AATAAA	-1	NA	29926228	29906352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_29906567_29910977_29911174_29911814_29911868_29911959_29912050_29923189_29923360_29925789
transcript_74445.known	chr16	+	775	4	FSM	ENSG00000174939.11	ENST00000563177.5	775	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	26.6624996744283	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCCTTGAAGGAAGGTGC	29898526	True	NA	NA	False	GGGGCT	-33	NA	29900374	29905887	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29900567_29901551_29901921_29904851_29904966_29905787
transcript_74446.known	chr16	+	1115	4	FSM	ENSG00000174939.11	ENST00000483405.5	1115	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	39.5165225640561	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCGACTACTTCCTTCGC	29898530	True	NA	9	True	TATAAA	-19	NA	29900378	29906056	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29900742_29901551_29901921_29904851_29904966_29905787
transcript_74450.known	chr16	+	1732	5	FSM	ENSG00000174939.11	ENST00000566693.1	1732	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	41.3906692383682	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATGGTTATTTGTAATTT	29900836	False	NA	76	True	AATAAA	-17	NA	29900857	29919864	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29901921_29904851_29904966_29905787_29905960_29906078_29906128_29919530
transcript_74451.known	chr16	-	2878	3	FSM	ENSG00000174943.11	ENST00000567795.3	2878	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	58.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTTACATGTCAATAAATT	-29924467	True	NA	NA	False	NA	NA	NA	29926205	29919669	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_29921962_29923189_29923360_29925789
transcript_74454.known	chr16	+	1013	7	FSM	ENSG00000149932.17	ENST00000570255.6	1013	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	376.069585759515	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGTGTATGGTGTTTAT	29957472	True	NA	14	True	AATAAA	-16	NA	29962110	29973048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29962133_29963106_29963309_29963399_29963590_29968024_29968255_29971407_29971579_29972041_29972141_29972949
transcript_74455.nic	chr16	+	1030	6	NIC	ENSG00000149932.17	novel	946	6	NA	NA	-87	0	combination_of_known_junctions	FALSE	canonical	3	263	junction_1	219.287391338399	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGTGTATGGTGTTTAT	NA	False	NA	14	True	AATAAA	-16	NA	29961991	29973048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_29962133_29963109_29963309_29963399_29963590_29968024_29968255_29971407_29971579_29972949
transcript_74457.known	chr16	+	946	6	FSM	ENSG00000149932.17	ENST00000279396.11	946	6	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	254.781004001476	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGTGTATGGTGTTTAT	29957440	True	NA	14	True	AATAAA	-16	NA	29962078	29973048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29962133_29963106_29963309_29963399_29963590_29968024_29968255_29971407_29971579_29972949
transcript_74461.known	chr16	+	1249	5	FSM	ENSG00000149932.17	ENST00000561899.6	1249	5	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	284.226472201306	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTTTGGTTTTACTTAT	29957465	True	NA	-10	True	NA	NA	NA	29962103	29972005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29962133_29963106_29963309_29963399_29963590_29968024_29968255_29971407
transcript_74467.known	chr16	+	4246	19	FSM	ENSG00000149930.18	ENST00000279394.7	4246	19	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_16	26.0566808570077	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGACTCACCCTTCTG	29974257	False	NA	15	True	AATAAA	-21	NA	29974280	29992261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29974649_29977737_29977905_29978088_29978161_29978251_29978354_29978798_29978845_29978973_29979071_29979194_29979309_29979416_29979509_29981660_29981755_29981858_29981941_29982733_29982902_29983071_29983333_29983502_29983665_29985212_29985579_29985657_29985862_29986264_29986505_29989592_29989806_29990783_29990967_29991046
transcript_7447.nic	chr1	+	2108	4	ISM	ENSG00000117000.9	ENST00000372771.5	6232	8	-14	43683	-14	-43683	5prime_fragment	FALSE	canonical	3	106	junction_1	18.8325958557674	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAAGGAAAAGTGCTGTT	40156780	True	NA	NA	False	AAGAAA	-7	NA	40161372	40197238	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_40161637_40189054_40189210_40190771_40190854_40195631
transcript_74475.known	chr16	+	4937	16	FSM	ENSG00000149930.18	ENST00000308893.9	4937	16	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_11	15.1798111538539	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCCTTTGGCCCAGGCT	29969759	True	NA	7	True	AATAAA	-15	NA	29973867	29988393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29974649_29977737_29977905_29978088_29978161_29978251_29978354_29978798_29978845_29978973_29979071_29979194_29979309_29979416_29979509_29981660_29981755_29981858_29981941_29982733_29982902_29983071_29983333_29983502_29983665_29985212_29985579_29985657_29985862_29986264
transcript_7448.known	chr1	-	1541	1	FSM	ENSG00000259943.1	ENST00000567508.1	1541	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATTAGTGTATGTTTTA	-40257163	True	NA	-4	True	AATAAA	-17	NA	40257967	40256426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_40256400_40258000
transcript_74500.nic	chr16	-	2256	13	NIC	ENSG00000149927.18	novel	1782	12	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_12	20.2325027286954	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGGACTCGTGTGTGCT	-30021225	False	384	-7	True	AATAAA	-12	NA	30021335	30005515	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_30006332_30006412_30006510_30006595_30006678_30006784_30006949_30007030_30007091_30007172_30007300_30008995_30009106_30009201_30009277_30009477_30009558_30009960_30010232_30010898_30010990_30013466_30013597_30021182
transcript_7451.known	chr1	+	3357	11	FSM	ENSG00000084073.10	ENST00000675937.1	3357	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_7	259.037912283125	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTATGTACTTTGTCTTT	NA	False	NA	14	True	ATTAAA	-14	NA	40258040	40294174	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40258395_40260838_40260986_40267785_40267873_40268418_40268536_40269974_40270128_40271893_40272036_40280119_40280313_40281342_40281528_40285924_40286030_40290853_40290998_40292444
transcript_74512.known	chr16	-	1782	12	FSM	ENSG00000149927.18	ENST00000564944.5	1782	12	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_11	17.8936250710083	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAACCCAGAGCCACTC	-30011209	False	212	NA	False	AAAAAG	-7	NA	30011421	30005798	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30006332_30006412_30006510_30006595_30006678_30006784_30006949_30007030_30007091_30007172_30007300_30008995_30009106_30009201_30009277_30009477_30009558_30009960_30010232_30010898_30010990_30011329
transcript_74528.known	chr16	+	1412	8	FSM	ENSG00000169592.15	ENST00000562441.5	1412	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	105.686482830404	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTCTGTATTAAAGGAGT	29986735	True	NA	-4	True	TTTAAA	-35	NA	29996245	30005762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30001211_30001531_30004567_30004658_30005220
transcript_74531.nic	chr16	+	1767	8	NIC	ENSG00000169592.15	novel	1926	11	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_7	90.4492190374787	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGAGTGGCTCTGGGTTT	29995665	True	NA	8	True	AATGAA	-12	NA	29995700	30005774	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30001413_30001531_30004567_30004658_30005220
transcript_74537.known	chr16	+	883	7	FSM	ENSG00000169592.15	ENST00000567065.5	883	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	88.4006033161916	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGATGCCCCCCCCCACG	29986735	True	NA	NA	False	GGGGCT	-35	NA	29996245	30005323	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30001211_30001531_30005220
transcript_74538.known	chr16	+	1154	7	FSM	ENSG00000169592.15	ENST00000563197.6	1154	7	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_6	52.3789610011076	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTTTGTCCTTTTTT	29986730	True	NA	25	True	ATTAAA	-15	NA	29996240	30005791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30001413_30001531_30005220
transcript_74540.known	chr16	+	880	7	FSM	ENSG00000169592.15	ENST00000567705.5	880	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	92.8505370055673	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTAAACATGCACGGGTGTC	29986739	True	NA	NA	False	NA	NA	NA	29996249	30005577	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30001464_30001531_30005220
transcript_74545.known	chr16	-	2560	7	FSM	ENSG00000149929.16	ENST00000279392.8	2560	7	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_4	20.5216687647201	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTACTATTCAGTGGCCA	-29994640	True	NA	-8	True	AATAAA	-20	NA	29995617	29992329	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_29993371_29993458_29993558_29993639_29993809_29993905_29994844_29995102_29995218_29995342_29995464_29995540
transcript_74547.known	chr16	+	515	6	FSM	ENSG00000169592.15	ENST00000620599.4	515	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	90.9276635573575	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGGAGAGCAAAGCCCAG	29986699	True	NA	NA	False	GGGGCT	-40	NA	29996209	30001229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30001211
transcript_74548.known	chr16	+	1489	6	FSM	ENSG00000169592.15	ENST00000304516.11	1489	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_5	77.0418068323946	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCTTTAAAAGGGCAGCT	29995679	False	NA	-49	True	NA	NA	NA	29995714	30005717	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30005220
transcript_74552.known	chr16	-	988	6	FSM	ENSG00000149929.16	ENST00000564026.1	988	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	53.4131070056779	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCCCCCATTCTCACC	-29995608	False	NA	-4	True	AATAAA	-27	NA	29995643	29992989	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_29993371_29993458_29993558_29993639_29993809_29995102_29995218_29995342_29995464_29995540
transcript_74559.known	chr16	-	2313	5	FSM	ENSG00000149926.14	ENST00000380495.9	2325	5	12	0	12	0	multi-exon	FALSE	canonical	3	63	junction_4	8.44097150806707	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGCCCTTGCCACCAAG	-30031149	False	NA	-5	True	AATAAA	-22	NA	30031259	30024426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30025468_30025725_30025822_30026608_30026844_30029431_30029516_30030402
transcript_7456.known	chr1	+	2975	10	FSM	ENSG00000084073.10	ENST00000372759.4	2975	10	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_5	27.7733329777209	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACTTTGTCTTTAGTTTG	40253183	True	NA	20	True	ATTAAA	-20	NA	40258235	40294180	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40258395_40260838_40260986_40267785_40267873_40268418_40268536_40269974_40270128_40271893_40272036_40281342_40281528_40285924_40286030_40290853_40290998_40292444
transcript_74562.nic	chr16	-	1191	4	ISM	ENSG00000149929.16	ENST00000279392.8	2560	7	-471	2107	-14	323	5prime_fragment	FALSE	canonical	3	142	junction_1	26.7374061735406	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCAGAGAGAGGAGGAAGT	-29995359	True	NA	NA	False	AAGAAA	-1	NA	29996088	29994436	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_29994844_29995102_29995218_29995342_29995464_29995540
transcript_74565.nnic	chr16	+	729	3	NNC	ENSG00000169592.15	novel	1154	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	56.5	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTTTGTCCTTTTTT	29986699	True	NA	25	True	ATTAAA	-15	NA	29996209	30005791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_29996251_30001413_30001531_30005220
transcript_74566.known	chr16	-	2065	12	FSM	ENSG00000149927.18	ENST00000616445.4	2065	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	20.627751506924	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGGACTCGTGTGTGCT	-30011209	False	212	-7	True	AATAAA	-12	NA	30011421	30005515	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30006332_30006412_30006510_30006595_30006678_30006784_30006949_30007030_30007091_30007172_30007300_30008995_30009106_30009201_30009277_30009477_30009558_30009960_30010236_30010902_30010990_30011329
transcript_74567.known	chr16	-	2013	11	FSM	ENSG00000149927.18	ENST00000350119.9	2013	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	18.3891272223562	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGACTCGTGTGTGCTGG	-30010949	True	NA	-5	True	AATAAA	-14	NA	30011027	30005513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30006332_30006412_30006510_30006595_30006678_30006784_30006949_30007030_30007091_30007172_30007300_30008995_30009106_30009201_30009277_30009477_30009558_30009960_30010236_30010902
transcript_74568.known	chr16	+	2323	14	FSM	ENSG00000285043.3	ENST00000338110.11	2323	14	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	5395.92772594932	988	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGCCGTCCGTGTCTTGT	30053000	True	NA	21	True	AATAAA	-18	NA	30053150	30070414	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30053218_30053463_30053500_30054783_30054928_30055171_30055328_30063728_30064249_30064423_30064506_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829_30070030_30070116
transcript_74575.known	chr16	+	1640	10	FSM	ENSG00000149925.22	ENST00000642816.3	1640	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	4765.61925037095	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGCCGTCCGTGTCTTGT	29959537	True	NA	21	True	AATAAA	-18	NA	30065759	30070414	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30065928_30066884_30067039_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829_30070030_30070116
transcript_74577.known	chr16	+	1603	9	FSM	ENSG00000149925.22	ENST00000412304.6	1603	9	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	3777.50502771009	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTCGGCCGTCCGTGTCT	30064023	False	NA	18	True	AATAAA	-15	NA	30064496	30070411	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30064785_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829_30070030_30070116
transcript_74579.known	chr16	+	1447	9	FSM	ENSG00000149925.22	ENST00000395240.7	1447	9	0	0	0	0	multi-exon	TRUE	canonical	3	704	junction_5	3651.02947596633	4226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCACACTGCCAAATAAACAG	29959554	True	NA	-13	True	NA	NA	NA	30065776	30070380	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30065928_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068991_30069305_30069390_30069498_30069674_30069829_30070030_30070116
transcript_74583.known	chr16	+	1499	8	FSM	ENSG00000149925.22	ENST00000569798.5	1499	8	0	0	0	0	multi-exon	FALSE	canonical	3	7633	junction_1	1361.86656123581	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAATGCTAAGTCCATCAC	29959549	True	NA	-41	True	NA	NA	NA	30065771	30070352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30065928_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829
transcript_74597.known	chr16	+	1550	9	FSM	ENSG00000149925.22	ENST00000563060.6	1550	9	0	0	0	0	multi-exon	FALSE	canonical	3	2581	junction_1	2958.74876161782	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGCCGTCCGTGTCTTGT	30064017	False	NA	21	True	AATAAA	-18	NA	30064273	30070414	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30064506_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829_30070030_30070116
transcript_74598.known	chr16	+	801	4	FSM	ENSG00000149925.22	ENST00000566130.1	801	4	0	0	0	0	multi-exon	FALSE	canonical	3	11256	junction_2	244.835999531659	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGCCGTCCGTGTCTTGT	30069044	False	NA	21	True	AATAAA	-18	NA	30069261	30070414	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30069390_30069498_30069674_30069829_30070030_30070116
transcript_74605.known	chr16	+	1402	9	FSM	ENSG00000149923.14	ENST00000279387.12	1402	9	0	0	0	0	multi-exon	FALSE	canonical	3	2200	junction_1	376.416574422541	4299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGGTTTGTGCCAGACT	30055634	True	NA	108	True	AATAAA	-15	NA	30075993	30085376	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30076095_30076314_30076476_30081258_30081311_30082483_30082535_30082745_30082848_30083393_30083568_30083654_30083782_30084665_30084856_30084932
transcript_74606.known	chr16	+	1301	8	FSM	ENSG00000149923.14	ENST00000627746.2	1301	8	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_2	1053.07948805551	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAGAAGAAAAATGGT	30055663	True	NA	88	True	GATAAA	-30	NA	30076022	30085356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30076095_30076314_30076476_30082483_30082535_30082745_30082848_30083393_30083568_30083654_30083782_30084665_30084856_30084932
transcript_74607.known	chr16	+	1447	8	FSM	ENSG00000149923.14	ENST00000563200.5	1447	8	0	0	0	0	multi-exon	FALSE	canonical	3	2200	junction_1	402.154097787586	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATTCTAATAAAAGAAG	30055647	True	NA	79	True	GATAAA	-21	NA	30076006	30085347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30076095_30076314_30076476_30081258_30081311_30082483_30082535_30082745_30082848_30083393_30083782_30084665_30084856_30084932
transcript_74608.known	chr16	+	1490	9	FSM	ENSG00000149923.14	ENST00000566749.5	1490	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_5	1072.82540954948	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGTTTTTGGGTTTGTGCC	30055657	True	NA	103	True	AATAAA	-10	NA	30076016	30085371	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30076095_30076314_30076476_30081258_30081311_30082483_30082535_30082745_30082964_30083393_30083568_30083654_30083782_30084665_30084856_30084932
transcript_74609.known	chr16	+	1333	8	FSM	ENSG00000149923.14	ENST00000561610.1	1333	8	0	0	0	0	multi-exon	FALSE	canonical	3	2822	junction_4	222.237600374932	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAGATAAAAATTTTGAGAA	30055865	False	NA	50	True	NA	NA	NA	30076224	30085318	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30076476_30081258_30081311_30082483_30082535_30082745_30082848_30083393_30083568_30083654_30083782_30084665_30084856_30084932
transcript_74610.known	chr16	-	1796	8	FSM	ENSG00000149922.12	ENST00000279386.6	1796	8	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_4	4.45384493374854	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATTGGGCTCCTGTGTT	-30090957	False	NA	-1	True	AATAAA	-25	NA	30091249	30085795	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30086439_30086511_30086696_30086777_30086852_30088544_30088616_30088692_30088840_30088942_30089211_30090757_30090993_30091075
transcript_74614.known	chr16	-	371	5	FSM	ENSG00000090238.12	ENST00000568674.1	371	5	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_4	99.9924997187289	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGTACAAAGAGGGGAAG	-30093530	True	NA	NA	False	NA	NA	NA	30096208	30092777	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30092800_30094788_30094898_30095102_30095147_30095251_30095336_30096096
transcript_74615.known	chr16	-	796	5	FSM	ENSG00000090238.12	ENST00000566595.5	796	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	131.873755918302	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGAGCTCTGGACCCTC	-30096620	True	NA	NA	False	NA	NA	NA	30096912	30092636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30092800_30094788_30094898_30095102_30095147_30095251_30095435_30096615
transcript_74616.known	chr16	+	1650	2	FSM	ENSG00000250616.3	ENST00000515455.2	1650	2	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTCAGTGCTGGTTTT	30096297	True	NA	6	True	AGTAAA	-18	NA	30096429	30104116	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30097420_30103456
transcript_74621.known	chr16	-	935	5	FSM	ENSG00000090238.12	ENST00000398838.8	935	5	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_4	63.7666644885868	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCGTTTGTACATAATAAAAC	-30093566	True	NA	-51	True	NA	NA	NA	30096244	30092348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30092800_30094788_30094898_30095102_30095147_30095251_30095435_30096096
transcript_74623.known	chr16	-	1787	9	FSM	ENSG00000102882.12	ENST00000263025.9	1787	9	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_4	24.8768843507381	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCTCTGTCTGTGTTC	-30121012	True	NA	-1	True	TATAAA	-24	NA	30123220	30114104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30114709_30116635_30116791_30116893_30117004_30117153_30117286_30117669_30117785_30118046_30118164_30118348_30118539_30121823_30122007_30123039
transcript_74624.known	chr16	-	2567	8	FSM	ENSG00000102882.12	ENST00000484663.5	2567	8	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_4	25.8093480928828	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGGCTCTGTCTGTGTT	-30122950	False	2208	-2	True	TATAAA	-23	NA	30122968	30114105	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30114709_30116635_30116791_30116893_30117004_30117153_30117286_30117669_30117785_30118046_30118164_30118348_30118539_30121823
transcript_74628.known	chr16	+	1623	11	FSM	ENSG00000102879.16	ENST00000219150.10	1623	11	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_2	7.85111457055621	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCCAGACTCTGATGACT	30183509	True	NA	NA	False	AATAAA	-20	NA	30183601	30189076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30183726_30185208_30185408_30186597_30186721_30186815_30186946_30187038_30187224_30187381_30187502_30187724_30187830_30187941_30188088_30188191_30188250_30188360_30188577_30188859
transcript_74631.known	chr16	+	2809	10	FSM	ENSG00000102879.16	ENST00000568763.1	2809	10	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	6.8059523693838	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCCCAGACTCTGATGAC	30183512	True	NA	NA	False	AATAAA	-19	NA	30183604	30189075	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30183726_30185208_30186721_30186815_30186946_30187038_30187224_30187381_30187502_30187724_30187830_30187941_30188088_30188191_30188250_30188360_30188577_30188859
transcript_74638.nic	chr16	+	2290	12	NIC	ENSG00000213599.10	novel	2195	11	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	3	89	junction_5	184.508684200648	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATTTGTGTTCATGTAG	NA	False	NA	6	True	AATAAA	-18	NA	30193874	30204310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_30194273_30194739_30194792_30194885_30195228_30196973_30197102_30197269_30197358_30200724_30200877_30200980_30201107_30201195_30201294_30202689_30202817_30202911_30203007_30203504_30203686_30203807
transcript_74655.known	chr16	+	1355	8	FSM	ENSG00000261052.6	ENST00000338971.10	1355	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	63.314891693851	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATTTGTGTTCATGTAG	NA	False	NA	6	True	AATAAA	-18	NA	30199254	30204310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30199328_30200724_30200877_30200980_30201107_30201195_30201294_30202689_30202817_30202911_30203007_30203504_30203686_30203807
transcript_74659.known	chr16	+	1133	6	FSM	ENSG00000132207.18	ENST00000251303.11	1133	6	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_2	56.4283616632629	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGCCTTATGGTGGATGC	NA	False	NA	NA	False	AATAAA	-14	NA	30193874	30197561	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30194273_30194739_30194792_30194885_30195228_30196973_30197102_30197269_30197358_30197436
transcript_74664.known	chr16	+	762	5	FSM	ENSG00000132207.18	ENST00000345535.8	762	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	236.72597554979	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGCCTTATGGTGGATGC	NA	False	NA	NA	False	AATAAA	-14	NA	30193903	30197561	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30194273_30194739_30194792_30196973_30197102_30197269_30197358_30197436
transcript_74667.known	chr16	-	335	3	FSM	ENSG00000169627.9	ENST00000569282.2	335	3	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	1200.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTCTGTGTCGATGTGT	-30193217	True	NA	NA	False	ATTAAA	-15	NA	30193666	30192933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30193075_30193357_30193418_30193532
transcript_74668.known	chr16	-	1012	3	FSM	ENSG00000169627.9	ENST00000305321.4	1012	3	0	0	0	0	multi-exon	FALSE	canonical	3	2524	junction_1	90.5	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTTCTGTGTCGATGTG	NA	False	NA	NA	False	ATTAAA	-14	NA	30194306	30192934	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30193075_30193357_30193456_30193532
transcript_74669.known	chr16	-	687	2	FSM	ENSG00000169627.9	ENST00000567436.2	687	2	0	0	0	0	multi-exon	FALSE	canonical	3	2705	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTCTGTGTCGATGTGT	NA	False	NA	NA	False	ATTAAA	-15	NA	30193697	30192933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30193456_30193532
transcript_7467.nic	chr1	-	2795	32	NIC	ENSG00000049089.15	novel	2852	32	NA	NA	84	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_31	6.30081837341927	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGAGTTGTTGGGCTTC	-40315883	False	NA	33	True	NA	NA	NA	40315951	40300488	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_40301382_40301811_40301890_40302620_40302810_40303130_40303186_40303529_40303677_40303806_40303840_40303927_40303973_40304063_40304100_40304319_40304392_40304475_40304530_40304793_40304848_40305714_40305769_40306142_40306188_40307445_40307500_40307702_40307757_40308191_40308246_40309937_40309992_40310110_40310165_40310263_40310318_40310713_40310768_40311092_40311147_40311229_40311287_40311499_40311548_40311661_40311716_40312058_40312113_40312455_40312480_40312573_40312610_40312730_40312785_40314204_40314268_40314351_40314388_40315589_40315665_40315844
transcript_74670.known	chr16	+	1558	5	FSM	ENSG00000132207.18	ENST00000565081.1	1558	5	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_1	59.4448273611758	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACTTGAGTACAATAAAAAG	NA	False	NA	NA	False	NA	NA	NA	30193886	30197531	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30194792_30194885_30195228_30196973_30197102_30197269_30197358_30197436
transcript_74671.known	chr16	-	307	2	FSM	ENSG00000169627.9	ENST00000565525.1	307	2	0	0	0	0	multi-exon	FALSE	canonical	3	2524	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTTCTGTGTCGATGTG	-30193075	False	NA	NA	False	ATTAAA	-14	NA	30193524	30192934	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30193075_30193357
transcript_74672.known	chr16	+	2195	11	FSM	ENSG00000213599.10	ENST00000565342.5	2195	11	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_4	180.926532050996	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATGATTTGTGTTCAT	NA	False	NA	2	True	AATAAA	-14	NA	30194432	30204306	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30194792_30194885_30195228_30196973_30197102_30197269_30197358_30200724_30200877_30200980_30201107_30201195_30201294_30202689_30202817_30202911_30203007_30203504_30203686_30203807
transcript_74676.known	chr16	-	2362	13	FSM	ENSG00000183604.15	ENST00000411546.4	2374	13	7	5	-1	-5	multi-exon	TRUE	canonical	3	32	junction_8	155.838302059824	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAACGTTTCTTCTTTTTC	-30334611	True	NA	NA	False	AATAAA	-30	NA	30335374	30285022	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30285458_30286166_30286269_30288560_30288786_30291202_30291376_30293098_30293197_30294114_30294188_30294565_30294692_30298376_30298591_30299868_30299928_30301221_30301359_30305054_30305211_30305789_30305954_30334974
transcript_74685.known	chr16	-	3361	7	FSM	ENSG00000169217.9	ENST00000305596.8	3361	7	0	0	0	0	multi-exon	FALSE	canonical	3	408	junction_6	25.5864547498606	518	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTCAGTTTGTGGTAATT	-30350355	True	NA	-8	True	AATAAA	-17	NA	30355308	30350772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30353096_30353180_30353288_30353367_30353801_30353900_30354059_30354183_30354323_30354603_30354708_30355211
transcript_74699.known	chr16	-	3580	9	FSM	ENSG00000169221.14	ENST00000409939.8	3580	9	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_3	17.726657186283	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTTCTGCCTTGTTA	-30370454	False	NA	-6	True	NA	NA	NA	30370494	30357101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30358574_30358662_30358818_30359171_30359362_30359537_30359604_30359726_30359842_30364899_30365007_30365104_30365213_30365494_30365595_30369227
transcript_7470.known	chr1	-	2852	32	FSM	ENSG00000049089.15	ENST00000372748.8	2852	32	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_31	5.88795839916535	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGAGTTGTTGGGCTTC	-40317218	True	NA	33	True	NA	NA	NA	40317286	40300488	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_40301382_40301811_40301890_40302620_40302810_40303130_40303186_40303529_40303677_40303806_40303840_40303927_40303973_40304063_40304100_40304319_40304392_40304475_40304530_40304793_40304848_40305714_40305769_40306142_40306188_40307445_40307500_40307702_40307757_40308191_40308246_40309937_40309992_40310110_40310165_40310263_40310318_40310713_40310768_40311092_40311147_40311229_40311287_40311499_40311548_40311661_40311716_40312058_40312113_40312455_40312480_40312573_40312610_40312730_40312785_40314204_40314268_40314351_40314388_40315589_40315665_40317122
transcript_74704.nic	chr16	-	3404	8	NIC	ENSG00000169221.14	novel	3580	9	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_2	53.21347075119	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTTCTGCCTTGTTA	-30370468	False	NA	-6	True	NA	NA	NA	30370508	30357101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_30358574_30358662_30358818_30359537_30359604_30359726_30359842_30364899_30365007_30365104_30365213_30365494_30365595_30369227
transcript_74705.nnic	chr16	-	3233	6	NIC	ENSG00000169221.14	novel	3580	9	NA	NA	32	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	62.3198202821542	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTTCTGCCTTGTTA	-30370422	False	82	-6	True	NA	NA	NA	30370462	30357101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_30358574_30358662_30358818_30359171_30359362_30359537_30359604_30359726_30359842_30369227
transcript_74707.nic	chr16	+	619	6	ISM	ENSG00000180209.12	ENST00000322861.12	657	7	997	0	-21	0	3prime_fragment	FALSE	canonical	0	0	junction_1	7.5736384915046	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCGGCGCCTTCAGAGTG	NA	False	NA	23	True	AATAAA	-24	NA	30375798	30377991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_30375913_30376144_30376221_30376422_30376528_30376619_30376699_30377653_30377703_30377795
transcript_74708.nic	chr16	+	742	5	NIC	ENSG00000180209.12	novel	657	7	NA	NA	88	0	intron_retention	FALSE	canonical	3	12	junction_1	4.15331193145904	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCGGCGCCTTCAGAGTG	NA	False	NA	23	True	AATAAA	-24	NA	30375907	30377991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_30376221_30376422_30376528_30376619_30376699_30377653_30377703_30377795
transcript_74711.known	chr16	+	3032	3	FSM	ENSG00000180035.13	ENST00000613509.2	3032	3	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	59	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGCGGCTTTCTAGCTCC	30393855	True	NA	22	True	AATAAA	-18	NA	30395419	30400108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30395579_30395779_30395874_30397329
transcript_74718.known	chr16	+	3234	2	FSM	ENSG00000180035.13	ENST00000320159.2	3234	2	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGCGGCTTTCTAGCTCC	30393854	True	NA	22	True	AATAAA	-18	NA	30395418	30400108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30395874_30397329
transcript_7472.known	chr1	+	2905	10	FSM	ENSG00000084070.12	ENST00000372718.8	2905	10	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_5	7.6173940004456	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGTTTGCTTGGCCATT	40372969	True	NA	6	True	AATAAA	-13	NA	40373726	40423322	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40374224_40406735_40406870_40408652_40408739_40409756_40409836_40413015_40413103_40414158_40414241_40415271_40415382_40416175_40416342_40416779_40417097_40421975
transcript_74720.known	chr16	+	2069	3	FSM	ENSG00000179965.12	ENST00000319296.10	2069	3	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	3.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAAAGGCTGGGCAT	30406296	True	NA	NA	False	ATTAAA	-5	NA	30407605	30419414	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30407665_30408044_30408195_30417554
transcript_74721.known	chr16	+	2415	3	FSM	ENSG00000179965.12	ENST00000566625.2	2415	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	38.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGGCTACATGGAAGTAT	30406319	True	NA	NA	False	AATAAA	-17	NA	30407628	30431108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30407665_30408044_30408195_30428879
transcript_74723.known	chr16	-	1024	3	FSM	ENSG00000179958.10	ENST00000678016.1	1024	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	549	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGTCGTGAGGTTTCAAT	-30419293	False	10531	-15	True	AATAAA	-20	NA	30429824	30423697	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30424534_30429056_30429168_30429747
transcript_74724.known	chr16	-	1181	3	FSM	ENSG00000179958.10	ENST00000319285.5	1181	3	0	0	0	0	multi-exon	FALSE	canonical	3	1078	junction_2	14.5	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTGTTATTACCTGTTT	-30419499	True	NA	68	True	AGTAAA	-22	NA	30430030	30423614	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30424534_30429056_30429168_30429879
transcript_74725.known	chr16	-	749	3	FSM	ENSG00000179958.10	ENST00000565758.1	749	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	553.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGATTATTCCTGGATGGC	-30419461	True	NA	4	True	AGTAAA	-21	NA	30429992	30424033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30424534_30429056_30429168_30429854
transcript_74726.known	chr16	-	2244	1	FSM	ENSG00000179918.19	ENST00000478753.5	2244	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	386	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCTAATGTTTGGTGG	-30439992	True	NA	-8	True	AATAAA	-26	NA	30445874	30443630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30443600_30445900
transcript_74728.known	chr16	-	1511	3	FSM	ENSG00000169955.8	ENST00000568028.1	1511	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	15	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCCCTTTGCTGAGGCAG	-30534970	False	NA	NA	False	NA	NA	NA	30535004	30532305	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30533149_30534196_30534311_30534450
transcript_74734.known	chr16	+	1153	2	FSM	ENSG00000235560.4	ENST00000664247.1	1153	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGCTTCCACTTCATTG	30534468	True	NA	NA	False	GATAAA	-21	NA	30535048	30537149	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30535481_30536428
transcript_74735.known	chr16	-	1999	2	FSM	ENSG00000169957.10	ENST00000562803.1	1999	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAGGTGGGGTGGGGAGTG	-30526787	False	NA	NA	False	NA	NA	NA	30526821	30524132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30526052_30526741
transcript_74736.known	chr16	-	3504	2	FSM	ENSG00000169955.8	ENST00000395094.3	3504	2	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTCTCTGAGAGCTTTGA	-30534468	True	NA	-1	True	ATTAAA	-21	NA	30534918	30530366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30533149_30534196
transcript_74740.known	chr16	-	2289	2	FSM	ENSG00000169957.10	ENST00000380412.7	2289	2	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	0	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGACTTGTCCTTAAAATG	-30526532	False	860	-14	True	AATAAA	-17	NA	30526566	30524003	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30526052_30526325
transcript_74743.known	chr16	-	2846	3	FSM	ENSG00000169951.10	ENST00000395091.3	2846	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	6.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTTGCTTGTATTGCAT	-30558267	True	NA	-37	True	AGTAAA	-17	NA	30558374	30553763	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30556108_30557732_30557847_30557986
transcript_74749.known	chr16	-	949	2	FSM	ENSG00000169951.10	ENST00000568333.1	949	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGACTGTGGCCGCCGCTT	-30558150	False	NA	NA	False	NA	NA	NA	30558211	30555637	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30556108_30557732
transcript_74767.known	chr16	-	3208	3	FSM	ENSG00000197162.10	ENST00000395216.3	3208	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	7	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCCAGGCACGTTGGCTCA	-30585024	True	NA	NA	False	ACTAAA	-24	NA	30585697	30580655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30583444_30585121_30585251_30585406
transcript_74768.known	chr16	-	1106	3	FSM	ENSG00000229809.9	ENST00000223459.11	1106	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	4.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCCAGTCTTTTGTTTA	-30571398	True	NA	-2	True	AATAGA	-17	NA	30571714	30569725	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30570437_30571009_30571124_30571433
transcript_74769.known	chr16	-	1414	2	FSM	ENSG00000229809.9	ENST00000563665.3	1414	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAGAGAGTGA	-30571356	True	NA	38	True	NA	NA	NA	30571672	30569685	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30570437_30571009
transcript_74770.known	chr16	+	1488	2	FSM	ENSG00000239791.2	ENST00000492040.1	1488	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGGCGTGGTGGCCCAT	30572200	False	NA	NA	False	AATAAA	-13	NA	30572254	30583860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30572412_30582529
transcript_74771.known	chr16	-	3557	3	FSM	ENSG00000156853.13	ENST00000287461.8	3557	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	0.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTTCCTTGTGGAATTA	-30609489	True	NA	NA	False	ATTAAA	-17	NA	30610389	30602557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30605448_30609524_30609639_30609836
transcript_74773.known	chr16	-	602	3	FSM	ENSG00000156853.13	ENST00000565710.1	602	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	35.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCCGGAGGAGCCGGTC	-30609814	False	NA	NA	False	NA	NA	NA	30609828	30605046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30605448_30609524_30609639_30609741
transcript_74775.known	chr16	-	1207	3	FSM	ENSG00000156853.13	ENST00000563304.5	1207	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	33	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTACCCCTCACTGCT	-30609486	True	NA	NA	False	NA	NA	NA	30610386	30604539	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30605448_30609524_30609639_30610201
transcript_74779.nic	chr16	+	2024	12	NIC	ENSG00000156858.12	novel	2316	11	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_1	21.4533897993836	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTTGTATCTCTAGCT	NA	False	NA	27	True	AGTAAA	-19	NA	30650691	30656412	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_30650807_30651595_30651669_30651795_30651965_30652720_30652843_30652913_30653104_30653364_30653409_30654229_30654340_30654628_30655215_30655350_30655421_30655501_30655594_30655867_30655940_30656031
transcript_74780.known	chr16	+	2078	12	FSM	ENSG00000156858.12	ENST00000300835.9	2078	12	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	12.5408423669516	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGTATCTCTAGCTG	30650416	True	NA	28	True	AGTAAA	-20	NA	30650959	30656413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30651128_30651595_30651669_30651795_30651965_30652720_30652843_30652913_30653104_30653364_30653409_30654229_30654340_30654628_30655215_30655350_30655421_30655501_30655594_30655867_30655940_30656031
transcript_74783.known	chr16	+	2316	11	FSM	ENSG00000156858.12	ENST00000542965.2	2316	11	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_6	10.2102889283311	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGTATCTCTAGCTG	30651174	False	NA	28	True	AGTAAA	-20	NA	30651189	30656413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30651669_30651795_30651965_30652720_30652843_30652913_30653104_30653364_30653409_30654229_30654340_30654628_30655215_30655350_30655421_30655501_30655594_30655867_30655940_30656031
transcript_74785.known	chr16	+	2124	11	FSM	ENSG00000156858.12	ENST00000287463.8	2124	11	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	12.9464280788177	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGTATCTCTAGCTG	30650969	True	NA	28	True	AGTAAA	-20	NA	30650984	30656413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30651128_30651595_30651669_30651795_30651965_30652720_30653104_30653364_30653409_30654229_30654340_30654628_30655215_30655350_30655421_30655501_30655594_30655867_30655940_30656031
transcript_748.known	chr1	-	875	4	FSM	ENSG00000175756.14	ENST00000378853.3	875	4	0	0	0	0	multi-exon	FALSE	canonical	3	687	junction_3	1786.35214893369	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTTCCTGCGGGTCTGG	-1344473	True	NA	-30	True	AATAAA	-15	NA	1375173	1373736	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1373903_1373999_1374446_1374704_1374791_1374996
transcript_7480.known	chr1	+	2109	6	FSM	ENSG00000187801.15	ENST00000411995.6	2109	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	9.45727233402951	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCCCAACTCTTAATTTT	40449461	True	NA	14	True	ATTAAA	-20	NA	40450106	40463718	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40450176_40450655_40451089_40454202_40454289_40456944_40457072_40457343_40457440_40462420
transcript_74807.known	chr16	+	5309	20	FSM	ENSG00000103549.22	ENST00000324685.11	5309	20	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	26.4374032024449	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCAAGGTCAAGTCCAA	30756732	True	NA	17	True	AATAAA	-18	NA	30762321	30776307	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30762361_30762474_30762678_30763117_30763286_30763417_30763560_30764178_30764386_30764937_30765060_30765180_30765328_30765424_30765500_30766162_30766283_30766378_30766559_30766740_30766877_30767893_30768016_30768102_30768531_30768618_30768737_30768837_30768988_30769185_30769399_30769474_30769601_30771832_30771974_30772088_30772191_30773937
transcript_74809.nnic	chr16	+	3857	20	NIC	ENSG00000103549.22	novel	5309	20	NA	NA	-13	3	combination_of_known_splicesites	FALSE	canonical	3	22	junction_19	51.7161440634035	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTCCCCCGATTTTAGC	30756719	True	NA	40	True	NA	NA	NA	30762308	30775218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_30762361_30762474_30762678_30763117_30763286_30763417_30763560_30764178_30764386_30764937_30765060_30765180_30765328_30765424_30765500_30766162_30766283_30766378_30766559_30766740_30766877_30767893_30768016_30768102_30768531_30768618_30768737_30768837_30768988_30769185_30769399_30769474_30769601_30771832_30771974_30772088_30772191_30774313
transcript_74815.nic	chr16	+	4268	20	NIC	ENSG00000103549.22	novel	5309	20	NA	NA	-13	0	intron_retention	FALSE	canonical	3	34	junction_1	46.9309034143906	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTAGTCCCCCGATTTT	30756719	True	NA	37	True	NA	NA	NA	30762308	30775215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_30762399_30762474_30762678_30763117_30763286_30763417_30763560_30764178_30764386_30764937_30765060_30765180_30765328_30765424_30765500_30766162_30766283_30766378_30766559_30766740_30766877_30767893_30768016_30768102_30768531_30768618_30768737_30768837_30768988_30769185_30769399_30769474_30769601_30771832_30771974_30772088_30772191_30773937
transcript_74819.known	chr16	+	5371	19	FSM	ENSG00000103549.22	ENST00000493683.5	5371	19	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	26.8139451465275	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCAAGGTCAAGTCCAA	30756746	True	NA	17	True	AATAAA	-18	NA	30762335	30776307	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30762361_30762474_30762678_30763117_30763286_30763417_30763560_30764178_30764386_30764937_30765060_30765180_30765328_30765424_30765500_30766162_30766283_30766378_30766559_30766740_30766877_30767893_30768016_30768102_30768531_30768618_30768737_30768837_30768988_30769185_30769601_30771832_30771974_30772088_30772191_30773937
transcript_7482.known	chr1	+	1976	5	FSM	ENSG00000187801.15	ENST00000484445.5	1976	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13.9463256809814	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCCAAAAACGAACATTAAAA	40449461	True	NA	-24	True	NA	NA	NA	40450106	40463680	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40450176_40450664_40451089_40456944_40457072_40457343_40457440_40462420
transcript_74822.known	chr16	+	4063	19	FSM	ENSG00000103549.22	ENST00000563683.5	4063	19	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	57.0900577277517	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTGCAGCCAGAGTAGCC	30756732	True	NA	3	True	AATAAA	-13	NA	30762321	30775181	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30762361_30762474_30762678_30763117_30763286_30763417_30763560_30764178_30764386_30764937_30765060_30765180_30765328_30765424_30765500_30766378_30766559_30766740_30766877_30767893_30768016_30768102_30768531_30768618_30768737_30768837_30768988_30769185_30769399_30769474_30769601_30771832_30771974_30772088_30772191_30773937
transcript_74827.known	chr16	+	3917	18	FSM	ENSG00000103549.22	ENST00000357890.9	3917	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	59.138041550913	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTAGTCCCCCGATTTT	30756732	True	NA	37	True	NA	NA	NA	30762321	30775215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30762361_30762474_30762678_30763117_30763286_30763417_30763560_30764178_30764386_30764937_30765060_30765180_30765328_30765424_30765500_30766740_30766877_30767893_30768016_30768102_30768531_30768618_30768737_30768837_30768988_30769185_30769399_30769474_30769601_30771832_30771974_30772088_30772191_30773937
transcript_7484.known	chr1	+	2796	6	FSM	ENSG00000187815.10	ENST00000372706.6	2796	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	6.85273667960473	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGATTTGCAGACCAGC	40477074	True	NA	82	True	AATAAA	-17	NA	40477289	40496343	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40477895_40479035_40479489_40481762_40481855_40489087_40489215_40489528_40489625_40494920
transcript_7485.nnic	chr1	+	2796	6	NNC	ENSG00000187815.10	novel	2104	6	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	7.98498591107085	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAACAGTTTTTTTCTGAT	40477039	True	NA	27	True	ATTAAA	-44	NA	40477254	40496288	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_40477895_40479015_40479489_40481762_40481855_40489087_40489215_40489528_40489625_40494920
transcript_74859.known	chr16	+	1536	10	FSM	ENSG00000156873.16	ENST00000328273.11	1536	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_7	78.661016746261	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATGAAATAAAATCTGCTA	30746423	True	NA	-12	True	NA	NA	NA	30748439	30757331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30748491_30748802_30748916_30751105_30751282_30751548_30751604_30753231_30753298_30753393_30753558_30756181_30756273_30756354_30756521_30756589_30756716_30756803
transcript_7486.known	chr1	+	2104	6	FSM	ENSG00000187815.10	ENST00000372705.3	2104	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	8.74985714169094	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAACAGTTTTTTTCTGAT	40477414	False	NA	27	True	ATTAAA	-44	NA	40477629	40496288	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40477895_40479332_40479489_40481762_40481855_40489087_40489215_40489528_40489625_40494920
transcript_74860.known	chr16	+	1791	9	FSM	ENSG00000156873.16	ENST00000563913.5	1791	9	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	29.8579972536672	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAATAAAATCTGCTACAC	30746426	True	NA	-9	True	NA	NA	NA	30748442	30757334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30748491_30748802_30748916_30751105_30751604_30753231_30753298_30753393_30753558_30756181_30756273_30756366_30756521_30756589_30756716_30756803
transcript_74861.known	chr16	-	6083	3	FSM	ENSG00000102870.6	ENST00000262525.6	6083	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	1.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTGTTTCTTGTTTTTT	-30785419	True	NA	-6	True	AATAAA	-15	NA	30787205	30778455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30784255_30784409_30784516_30787027
transcript_74865.nic	chr16	-	6264	2	NIC	ENSG00000102870.6	novel	6083	3	NA	NA	-29	-3	intron_retention	FALSE	canonical	3	28	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGGGTGTTTCTTGTTT	-30785448	False	NA	-9	True	AATAAA	-12	NA	30787234	30778458	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_30784516_30787027
transcript_74867.nic	chr16	-	3260	2	NIC	ENSG00000102870.6	novel	6083	3	NA	NA	-29	-3007	intron_retention	FALSE	canonical	3	28	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTTAAGTCTGTAGCAG	-30785448	False	NA	NA	False	TATAAA	-19	NA	30787234	30781462	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_30784516_30787027
transcript_74869.known	chr16	-	1603	6	FSM	ENSG00000099385.12	ENST00000572628.5	1603	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	188.813135136303	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGAACGAATTGGGCTAT	-30893915	False	NA	NA	False	NA	NA	NA	30893942	30851245	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30852323_30888859_30888946_30892585_30892748_30892839_30892949_30893211_30893291_30893852
transcript_7487.known	chr1	+	1899	4	FSM	ENSG00000164002.12	ENST00000415550.6	1899	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	7.84573486395988	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTGAACTGATGGTTTTT	40508307	True	NA	5	True	AATAAA	-19	NA	40508766	40516038	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40508909_40509450_40509626_40509732_40509791_40514514
transcript_74871.known	chr16	-	857	6	FSM	ENSG00000099385.12	ENST00000215115.5	857	6	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_1	35.6673520183374	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTCATGTCATTTCC	-30891670	True	NA	0	True	AATAAA	-14	NA	30894077	30887794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_30887991_30888859_30888946_30892585_30892748_30892839_30892949_30893211_30893291_30893852
transcript_74875.known	chr16	+	1375	2	FSM	ENSG00000260083.3	ENST00000663816.1	1375	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATAAAATGAGTGTGTCT	NA	False	NA	7	True	AATAAA	-13	NA	30875407	30895211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30876119_30894547
transcript_74876.known	chr16	+	925	1	FSM	ENSG00000260083.3	ENST00000658747.1	925	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTGTCTTTGTTGACT	30894193	True	NA	16	True	AATAAA	-22	NA	30894295	30895220	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30894300_30895200
transcript_74877.nic	chr16	+	4325	11	NIC	ENSG00000099364.18	novel	4490	11	NA	NA	29	0	combination_of_known_junctions	TRUE	canonical	2	2	junction_1	4.83321838943783	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGGGGCTGCGGAGTTCG	30922222	True	NA	29	True	TATAAA	-15	NA	30923600	30948776	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_30924460_30925730_30925932_30927307_30927452_30927572_30927660_30927744_30927964_30928466_30928500_30930072_30930585_30942115_30942280_30942374_30942537_30946729_30946949_30947051
transcript_74878.known	chr16	+	4490	11	FSM	ENSG00000099364.18	ENST00000338343.10	4490	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	4.83838816136118	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGGAGTTCGTGTGTGT	30922193	True	NA	36	True	TATAAA	-22	NA	30923571	30948783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30924460_30925730_30925932_30927307_30927452_30927572_30927660_30927744_30927964_30928466_30928629_30930072_30930585_30942115_30942280_30942374_30942537_30946729_30946949_30947051
transcript_7488.known	chr1	+	1878	4	FSM	ENSG00000164002.12	ENST00000432259.6	1878	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	13.2748718344933	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGAACTGATGGTTT	40508307	True	NA	3	True	AATAAA	-17	NA	40508766	40516036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40508890_40509450_40509626_40509732_40509791_40514514
transcript_74881.known	chr16	+	3796	11	FSM	ENSG00000099364.18	ENST00000562319.7	3796	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.1662365412358	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGGAGTTCGTGTGTGT	30924519	True	NA	36	True	TATAAA	-22	NA	30924574	30948783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30924769_30925730_30925932_30927307_30927452_30927572_30927660_30927744_30927964_30928466_30928629_30930072_30930585_30942115_30942280_30942374_30942537_30946729_30946949_30947051
transcript_7489.nnic	chr1	+	2363	4	NIC	ENSG00000164002.12	novel	1892	4	NA	NA	1	0	intron_retention	FALSE	canonical	1	2	junction_1	13.2748718344933	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGAACTGATGGTTT	40508282	True	NA	3	True	AATAAA	-17	NA	40508741	40516036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_40509350_40509450_40509626_40509732_40509791_40514514
transcript_74890.nnic	chr16	+	2096	3	NNC	ENSG00000175938.7	novel	1393	3	NA	NA	-27	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	29.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCCCTGTTGCTGTGA	30949011	False	NA	25	True	AATAAA	-12	NA	30949040	30954935	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_30949518_30953184_30954320_30954451
transcript_74893.known	chr16	+	2204	2	FSM	ENSG00000175938.7	ENST00000318663.5	2204	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCCTGTTGCTGTGAAGG	30947858	True	NA	28	True	AATAAA	-15	NA	30949067	30954938	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30949518_30953184
transcript_74894.known	chr16	+	628	2	FSM	ENSG00000175938.7	ENST00000562699.1	628	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCCCTTCCACCTTTTC	30947942	True	NA	NA	False	NA	NA	NA	30949151	30956461	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30949518_30956199
transcript_74895.known	chr16	+	5934	19	FSM	ENSG00000099381.19	ENST00000684162.1	5934	19	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_7	8.39477350630869	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGGTCGGTGTATTTG	30954924	True	NA	16	True	ATTAAA	-16	NA	30957970	30984664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30958125_30958716_30958882_30959090_30959187_30961266_30961538_30963432_30963555_30964093_30964324_30964611_30965462_30965600_30966387_30966883_30967061_30967500_30967589_30969304_30969463_30969601_30969690_30971377_30971720_30979144_30980195_30980484_30980658_30980738_30980850_30981060_30981181_30983634_30983773_30983849
transcript_74897.nnic	chr16	+	2416	7	NNC	ENSG00000099377.14	novel	2171	7	NA	NA	-76	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	7.96694560181141	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGTCCATCTGTCTGTCC	NA	False	NA	14	True	ATTAAA	-15	NA	30985130	30989147	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_30985298_30985483_30985825_30986048_30986205_30986422_30986532_30986604_30986705_30986839_30987003_30987767
transcript_74899.known	chr16	+	2171	7	FSM	ENSG00000099377.14	ENST00000297679.10	2171	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	6.89605362185907	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGTCCATCTGTCTGTCC	30984807	True	NA	14	True	ATTAAA	-15	NA	30985206	30989147	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_30985298_30985652_30985825_30986048_30986205_30986422_30986532_30986604_30986705_30986839_30987003_30987767
transcript_749.known	chr1	-	798	4	FSM	ENSG00000175756.14	ENST00000321751.9	798	4	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_3	2010.08943969057	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGCGGGTCTGGAGCTC	-1344469	True	NA	-25	True	AATAAA	-20	NA	1375169	1373731	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1373903_1373999_1374446_1374704_1374791_1375074
transcript_74909.known	chr16	+	1410	11	FSM	ENSG00000103496.15	ENST00000313843.8	1410	11	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_3	15.9940613979064	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCCCTGTGCACGTGTG	31028975	True	NA	8	True	ATTAAA	-19	NA	31033557	31040164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31033836_31034012_31034115_31034225_31034326_31034461_31034537_31034969_31035041_31037925_31038035_31038113_31038191_31038509_31038648_31039540_31039652_31039722_31039819_31039911
transcript_7491.known	chr1	+	1691	3	FSM	ENSG00000164002.12	ENST00000443729.6	1691	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	14	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGAACTGATGGTTT	40508338	True	NA	3	True	AATAAA	-17	NA	40508797	40516036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40508909_40509732_40509791_40514514
transcript_74914.known	chr16	+	649	4	FSM	ENSG00000103496.15	ENST00000613541.1	649	4	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_3	22.0957512255687	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTCAGCCTTAGTCATT	31029222	False	NA	4	True	AATAAA	-18	NA	31033804	31034877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31033836_31034012_31034115_31034225_31034326_31034461
transcript_74915.known	chr16	+	846	4	FSM	ENSG00000103496.15	ENST00000565483.1	846	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	66.594961437701	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAACTTACTTTCTCCT	31029023	True	NA	-20	True	NA	NA	NA	31033605	31034853	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31033836_31034012_31034115_31034203_31034326_31034461
transcript_74916.known	chr16	+	1002	3	FSM	ENSG00000103496.15	ENST00000461455.5	1002	3	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	18	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTCAGCCTTAGTCATT	31029005	True	NA	4	True	AATAAA	-18	NA	31033587	31034877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31033836_31034012_31034115_31034225
transcript_74918.known	chr16	-	400	3	FSM	ENSG00000167394.13	ENST00000414399.1	400	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	44.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGAGCGCACGCACTCGG	-31073684	False	NA	NA	False	NA	NA	NA	31073712	31062121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_31062281_31064294_31064482_31073658
transcript_74919.known	chr16	-	2865	3	FSM	ENSG00000167394.13	ENST00000538906.5	2865	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	39	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCATCTTCTGTGTTCTG	-31073474	False	NA	-5	True	ATTAAA	-18	NA	31073502	31060847	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_31062281_31063812_31064482_31072739
transcript_7492.known	chr1	+	1606	2	FSM	ENSG00000164002.12	ENST00000419161.2	1606	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGAACTGATGGTTT	40508346	True	NA	3	True	AATAAA	-17	NA	40508805	40516036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40508890_40514514
transcript_74920.known	chr16	-	2685	3	FSM	ENSG00000167394.13	ENST00000300849.5	2685	3	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	2.5	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCATCTTCTGTGTTCTGG	-31074212	False	NA	-4	True	ATTAAA	-19	NA	31074240	31060846	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_31062281_31063812_31064482_31073658
transcript_7493.known	chr1	+	2567	2	FSM	ENSG00000164002.12	ENST00000372703.1	2567	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTTGAACTGATGGTTTT	40508287	True	NA	4	True	AATAAA	-18	NA	40508746	40516037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40509791_40514514
transcript_74938.known	chr16	+	6892	3	FSM	ENSG00000167395.10	ENST00000300850.5	6892	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	10	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCCAGTCCTCATAGGCA	31072926	True	NA	NA	False	NA	NA	NA	31074421	31084196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31074632_31076245_31081702_31082970
transcript_7494.known	chr1	+	1625	2	FSM	ENSG00000164002.12	ENST00000418186.2	1625	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGAACTGATGGTTT	40508315	True	NA	3	True	AATAAA	-17	NA	40508774	40516036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40508878_40514514
transcript_74942.known	chr16	-	840	3	FSM	ENSG00000167397.15	ENST00000394975.3	840	3	0	0	0	0	multi-exon	FALSE	canonical	3	897	junction_2	40	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGTCTGAACCATGTGT	-31085838	True	NA	-17	True	AATAAA	-18	NA	31094797	31090853	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_31091343_31093311_31093422_31094556
transcript_74943.known	chr16	-	876	3	FSM	ENSG00000167397.15	ENST00000300851.10	876	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	478.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGTCTGCCATGGACT	-31085801	True	NA	-5	True	AATAAA	-30	NA	31094760	31090841	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_31091343_31093311_31093483_31094556
transcript_74945.known	chr16	-	901	2	FSM	ENSG00000167397.15	ENST00000354895.4	901	2	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_1	0	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGTCTGCCATGGACT	-31094944	False	NA	-5	True	AATAAA	-30	NA	31094956	31090841	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_31091343_31094556
transcript_74946.known	chr16	-	1077	4	FSM	ENSG00000167397.15	ENST00000319788.11	1077	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	420.74457809935	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGTCTGCCATGGACT	-31094928	False	NA	-5	True	AATAAA	-30	NA	31094940	31090841	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_31091343_31092782_31092865_31093311_31093422_31094556
transcript_74947.known	chr16	+	2036	12	FSM	ENSG00000103507.14	ENST00000219794.11	2036	12	0	0	0	0	multi-exon	FALSE	canonical	3	567	junction_11	55.9756440541127	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTTTCCGGGTCCCAG	31101434	True	NA	12	True	NA	NA	NA	31108385	31112791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31108480_31109046_31109419_31109510_31109580_31109672_31109784_31110076_31110125_31110204_31110325_31110400_31110500_31110687_31110762_31111090_31111220_31111299_31111390_31111868_31112028_31112120
transcript_74953.known	chr16	+	1997	11	FSM	ENSG00000103507.14	ENST00000394950.7	1997	11	0	0	0	0	multi-exon	FALSE	canonical	3	631	junction_1	39.4827810570633	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGGCCCCGTGTGTGGG	NA	False	NA	18	True	ATTAAA	-20	NA	31108293	31112567	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31108480_31109046_31109419_31109510_31109580_31109672_31109784_31110076_31110125_31110204_31110325_31110400_31110500_31110687_31110762_31111090_31111220_31111299_31111390_31111868
transcript_74966.known	chr16	+	1789	10	FSM	ENSG00000103510.20	ENST00000448516.6	1789	10	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_3	16.0030861221234	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGGACTTTGGAGGGGA	31112567	True	NA	20	True	AATAAA	-14	NA	31117663	31131359	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31117893_31120185_31120261_31120338_31120515_31127034_31127089_31127188_31127354_31128049_31128140_31130016_31130158_31130266_31130361_31130455_31130607_31130745
transcript_74967.known	chr16	+	1495	11	FSM	ENSG00000103510.20	ENST00000219797.9	1495	11	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_3	15.3218797802358	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGGACTTTGGAGGGGA	31112567	True	NA	20	True	AATAAA	-14	NA	31117663	31131359	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31117893_31120185_31120261_31120338_31120515_31127034_31127089_31127188_31127354_31128049_31128140_31130016_31130158_31130266_31130361_31130455_31130607_31130745_31130901_31131194
transcript_7497.known	chr1	+	2102	6	FSM	ENSG00000117010.17	ENST00000648542.1	2102	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	22.5335305711289	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTCAGTTGAGGAAAAGAA	40530701	True	NA	-51	True	NA	NA	NA	40531572	40548110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40531788_40532732_40532809_40533142_40533182_40540585_40540713_40541614_40541711_40546561
transcript_74972.known	chr16	-	1837	6	FSM	ENSG00000052344.16	ENST00000317508.11	1837	6	0	0	0	0	multi-exon	TRUE	canonical	3	716	junction_3	21.0428135001002	996	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCGTGCATGTGTGAAG	-31125319	True	NA	-5	True	ATTAAA	-15	NA	31135727	31131432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_31132336_31132428_31132596_31132681_31132954_31133225_31133389_31135153_31135172_31135413
transcript_74993.known	chr16	+	1785	15	FSM	ENSG00000089280.19	ENST00000568685.1	1785	15	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_8	648.366613349363	1160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCCATTAAAAGTGACCAT	31103915	True	NA	0	True	NA	NA	NA	31180150	31191575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31180228_31182397_31182423_31182512_31182665_31183857_31184003_31184208_31184397_31184938_31185180_31186801_31186837_31188324_31188358_31189119_31189227_31189664_31189795_31190039_31190142_31190274_31190399_31190741_31190843_31190962_31191111_31191398
transcript_75.known	SIRV1	-	973	3	FSM	SIRV1A	SIRV106	973	3	0	0	0	0	multi-exon	FALSE	canonical	3	870	junction_2	92	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10786	1000	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV1_-_1485_7552_7809_10553
transcript_750.known	chr1	-	1047	4	FSM	ENSG00000175756.14	ENST00000338338.10	753	4	-288	-6	-288	0	multi-exon	FALSE	canonical	3	2275	junction_3	1038.92583416185	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCGGGTCTGGAGCTCCA	-1375448	False	NA	-23	True	AATAAA	-22	NA	1375495	1373729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1373903_1373999_1374446_1374704_1374791_1375153
transcript_7500.known	chr1	+	1028	5	FSM	ENSG00000117010.17	ENST00000372697.7	1028	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	16.1148223694833	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTGCCAGGCTGATT	40530791	True	NA	NA	False	NA	NA	NA	40531662	40545037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40531788_40533142_40533182_40540585_40540713_40541614_40541711_40544396
transcript_75001.known	chr16	+	1787	14	FSM	ENSG00000089280.19	ENST00000566605.5	1787	14	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	674.779902753308	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTGTTCCTCTTCCCC	31103902	True	NA	27	True	ATTAAA	-17	NA	31180137	31191602	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31180228_31182397_31182423_31182512_31182665_31183857_31184003_31184208_31184397_31184938_31185180_31188324_31188358_31189122_31189227_31189664_31189795_31190039_31190142_31190274_31190399_31190741_31190843_31190962_31191111_31191398
transcript_75009.known	chr16	+	4920	13	FSM	ENSG00000089280.19	ENST00000487509.6	4920	13	0	0	0	0	multi-exon	FALSE	canonical	3	1041	junction_3	462.568463401185	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTGTTCCTCTTCCCC	31103914	True	NA	27	True	ATTAAA	-17	NA	31180149	31191602	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31180228_31182397_31182423_31182512_31182665_31183857_31184003_31184208_31184397_31184938_31188358_31189122_31189227_31189664_31189795_31190039_31190142_31190274_31190399_31190741_31190843_31190962_31191111_31191398
transcript_7501.known	chr1	+	2019	5	FSM	ENSG00000117010.17	ENST00000372699.8	2019	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	7.46240577829965	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTGTTTTGCTTTTTC	40530765	True	NA	6	True	AATAAA	-17	NA	40531636	40548167	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40531788_40533142_40533182_40540585_40540713_40541614_40541711_40546561
transcript_75020.nic	chr16	+	1030	9	ISM	ENSG00000089280.19	ENST00000254108.12	1824	15	-18	2379	-17	-469	5prime_fragment	FALSE	canonical	3	1041	junction_3	261.781367509225	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTTGTGGAGAGGAGTGG	31103885	True	NA	7	True	NA	NA	NA	31180120	31189226	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_31180228_31182397_31182423_31182512_31182665_31183857_31184003_31184208_31184397_31184938_31185180_31186801_31186837_31188324_31188358_31189122
transcript_75024.nic	chr16	+	1112	6	ISM	ENSG00000089280.19	ENST00000568685.1	1785	15	-30	6142	-17	1035	5prime_fragment	FALSE	canonical	3	1041	junction_3	256.069053186831	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATACATAGATACGTATGG	31103885	True	NA	NA	False	AATAGA	-40	NA	31180120	31185433	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_31180228_31182397_31182423_31182512_31182665_31183857_31184003_31184208_31184397_31184938
transcript_75033.known	chr16	+	952	3	FSM	ENSG00000089280.19	ENST00000487045.6	952	3	0	0	0	0	multi-exon	FALSE	canonical	3	1691	junction_1	45	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTTTGACTCTTCTTA	31103903	True	NA	NA	False	NA	NA	NA	31180138	31183350	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31180228_31182397_31182423_31182512
transcript_75034.known	chr16	-	757	3	FSM	ENSG00000103490.14	ENST00000247470.10	757	3	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_2	11	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGTTTTCCTGCTTC	-31197160	True	NA	-4	True	AATATA	-18	NA	31202760	31201485	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_31201842_31202146_31202204_31202416
transcript_75037.known	chr16	+	1095	2	FSM	ENSG00000261359.2	ENST00000561916.2	1095	2	0	0	0	0	multi-exon	FALSE	canonical	1	18	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTCTTTGTTTGAATCCT	31201825	True	NA	11	True	ATTAAA	-22	NA	31201884	31203452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31201987_31202459
transcript_75039.known	chr16	-	696	2	FSM	ENSG00000103490.14	ENST00000350605.4	696	2	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGTTTTCCTGCTTC	-31197156	True	NA	-4	True	AATATA	-18	NA	31202756	31201485	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_31201842_31202416
transcript_75048.known	chr16	-	589	2	FSM	ENSG00000169900.8	ENST00000302964.4	589	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGCTGCGCGCACACGT	-31216936	True	NA	-5	True	AATAAA	-19	NA	31217135	31215961	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_31216158_31216742
transcript_75049.known	chr16	-	372	3	FSM	ENSG00000156885.6	ENST00000287490.5	372	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCGGCTCTGTGGGGAG	-31428277	True	NA	-1	True	AATAAA	-16	NA	31428360	31427730	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_31427858_31428014_31428152_31428252
transcript_75050.known	chr16	-	1905	2	FSM	ENSG00000176723.10	ENST00000315678.10	1905	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTAGTCCCAGCTACTC	-31442771	True	NA	NA	False	AATAAA	-29	NA	31442789	31435433	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_31437185_31442635
transcript_75055.known	chr16	-	3026	1	FSM	ENSG00000260267.1	ENST00000564629.1	3026	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTTTGTGTATGTGAGA	-31459557	True	NA	-2	True	NA	NA	NA	31459736	31456710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_31456700_31459700
transcript_75056.known	chr16	+	3108	6	FSM	ENSG00000140691.18	ENST00000268314.9	3108	6	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_5	5.6	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTGTGTTGTGTGGTGTG	31458541	True	NA	4	True	ATTAAA	-16	NA	31459500	31467165	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31460000_31461921_31462030_31462130_31462918_31464393_31464888_31465849_31465983_31466078
transcript_75057.known	chr16	+	2072	7	FSM	ENSG00000140691.18	ENST00000564900.1	2072	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	35.6978057215473	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTGTGTTGTGTGGTGTG	31459944	False	NA	4	True	ATTAAA	-16	NA	31459960	31467165	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31460000_31461921_31462030_31462130_31462196_31462771_31462918_31464393_31464888_31465849_31465983_31466078
transcript_75058.known	chr16	+	1805	11	FSM	ENSG00000140682.19	ENST00000394863.8	1805	11	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	7.67854152818099	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGGTGCTGTCTCTGAA	31471753	True	NA	6	True	CATAAA	-18	NA	31472151	31477958	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31472202_31473440_31473557_31473681_31473735_31473834_31473978_31474151_31474240_31474349_31474456_31474562_31474758_31476011_31476186_31476480_31476563_31476861_31477011_31477309
transcript_7506.known	chr1	+	562	4	FSM	ENSG00000117010.17	ENST00000465152.1	562	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	21.7613316585993	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATAATAGAAGTTATACT	40530781	True	NA	NA	False	TATAAA	-41	NA	40531652	40546765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40531788_40540585_40540713_40541614_40541711_40546561
transcript_75060.nic	chr16	+	1346	7	ISM	ENSG00000140682.19	ENST00000569703.5	1005	8	-36	949	-2	580	5prime_fragment	FALSE	canonical	2	11	junction_1	6.82316316348624	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGGTATGTTATTATTGT	31471740	True	NA	20	True	AATAAA	-29	NA	31472138	31475339	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_31472202_31473440_31473557_31473681_31473735_31473834_31473978_31474151_31474240_31474349_31474456_31474562
transcript_75064.known	chr16	-	2785	13	FSM	ENSG00000140688.17	ENST00000327237.7	2785	13	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_4	21.5192097645078	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAACTGCAGCTGGACCC	-31506891	True	NA	-11	True	AATAAA	-31	NA	31508391	31489474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_31490933_31492008_31492087_31492196_31492341_31492977_31493049_31493466_31493525_31493602_31493788_31493865_31493937_31496848_31496951_31499301_31499408_31499492_31499526_31500685_31500732_31507763_31507879_31508073
transcript_7507.known	chr1	-	7259	8	FSM	ENSG00000117016.10	ENST00000372684.8	7259	8	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	6.49018096662888	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATGTGTTGCTTTCTGT	-40664477	True	NA	-4	True	ATTAAA	-17	NA	40665682	40620679	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_40626730_40628809_40628950_40629270_40629373_40633068_40633182_40635915_40636058_40641708_40641957_40647667_40647843_40665393
transcript_75075.nic	chr16	-	3277	11	NIC	ENSG00000140688.17	novel	2785	13	NA	NA	-15	0	intron_retention	FALSE	canonical	3	145	junction_8	21.1898560636924	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTCTTGCTCGGCAAT	-31506906	True	NA	-30	True	AATAAA	-12	NA	31508406	31489493	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_31490933_31492008_31492087_31492196_31492341_31492977_31493788_31493865_31493937_31496848_31496951_31499301_31499408_31499492_31499526_31500685_31500732_31507763_31507879_31508073
transcript_75096.known	chr16	+	961	2	FSM	ENSG00000260625.3	ENST00000651898.1	961	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTAAGTACTTTAAAAACA	31508409	True	NA	NA	False	AATAAA	-13	NA	31508463	31509560	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31509037_31509172
transcript_75098.known	chr16	+	1812	9	FSM	ENSG00000131797.13	ENST00000254109.10	1844	9	32	0	4	0	multi-exon	TRUE	canonical	1	2	junction_2	6.6332495807108	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTCCTAAACTTACTGTG	31699961	True	NA	NA	False	NA	NA	NA	31700589	31707437	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31700739_31701662_31701859_31702534_31702682_31703155_31703368_31704219_31704391_31705348_31705473_31705671_31705793_31705889_31706035_31706890
transcript_75100.known	chr16	+	1571	8	FSM	ENSG00000131797.13	ENST00000693004.1	1643	8	72	0	5	0	multi-exon	FALSE	canonical	3	10	junction_1	5.01426536422407	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTCCTAAACTTACTGTG	31700006	True	NA	NA	False	NA	NA	NA	31700634	31707437	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31700739_31702534_31702682_31703155_31703368_31704219_31704391_31705348_31705473_31705671_31705793_31705889_31706035_31706890
transcript_75106.known	chr16	+	518	5	FSM	ENSG00000197302.11	ENST00000529515.2	5982	5	62	5402	3	-52	multi-exon	FALSE	canonical	3	34	junction_4	29.7605023479107	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTAAGCCAAGGCATAAGC	31710649	True	NA	NA	False	AATAAA	-11	NA	31713305	31754484	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31713436_31722625_31722753_31723257_31723354_31753765_31753901_31754454
transcript_75110.known	chr16	+	2769	5	FSM	ENSG00000197302.11	ENST00000316491.14	2759	5	-10	0	2	0	multi-exon	FALSE	canonical	3	80	junction_4	10.7325439668328	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCATTGTATTCATTTA	31710577	True	NA	4	True	AATAAA	-14	NA	31713233	31761565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31713436_31722625_31722753_31723257_31723354_31753765_31753901_31759356
transcript_75113.known	chr16	+	481	3	FSM	ENSG00000197302.11	ENST00000542684.5	481	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	30	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTTAAAAAAATTAAATGGG	31710630	True	NA	NA	False	NA	NA	NA	31713286	31759553	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31713436_31753765_31753901_31759356
transcript_75117.known	chr16	+	680	5	FSM	ENSG00000185947.15	ENST00000394846.7	680	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	30.7845334543176	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATAACTTTGATCAATATA	31870931	True	NA	NA	False	NA	NA	NA	31873806	31914725	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31873970_31884497_31884625_31885160_31885257_31890206_31890251_31914475
transcript_75119.known	chr16	+	3268	4	FSM	ENSG00000185947.15	ENST00000300870.15	3268	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	22.2161102706022	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGAAATTACTTCAATT	31870931	True	NA	72	True	ATTAAA	-20	NA	31873806	31917357	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_31873970_31884497_31884625_31885160_31885257_31914475
transcript_7512.known	chr1	+	1536	11	FSM	ENSG00000066136.21	ENST00000425457.6	1536	11	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_8	99.1314279126453	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAATATTTCTCCTTTTG	40689400	True	NA	37	True	ATTAAA	-38	NA	40691715	40771139	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40691868_40738835_40738949_40747533_40747606_40749572_40749687_40753150_40753247_40758120_40758295_40762887_40763047_40766595_40766704_40766917_40766975_40769355_40769416_40770708
transcript_75121.known	chr16	-	5177	13	FSM	ENSG00000171241.9	ENST00000303383.8	5177	13	0	0	0	0	multi-exon	TRUE	canonical	3	106	junction_8	12.690766547201	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGTGTAATATATCAATGC	-46619689	True	NA	72	True	AATATA	-17	NA	46621379	46578590	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_46582055_46583515_46583658_46584002_46584090_46595551_46595671_46599830_46599963_46603538_46603660_46603974_46604144_46604227_46604462_46608296_46608390_46615945_46616155_46617633_46617750_46618204_46618373_46621256
transcript_75131.known	chr16	-	1482	7	FSM	ENSG00000171241.9	ENST00000566016.5	1482	7	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_2	12.9700509722291	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCATTATGTGGTACATGG	-46619678	True	NA	NA	False	TATAAA	-38	NA	46621368	46603593	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_46604144_46604227_46604462_46608296_46608390_46615945_46616155_46617633_46617750_46618204_46618373_46621256
transcript_75132.known	chr16	-	530	2	FSM	ENSG00000171241.9	ENST00000564272.1	530	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCATGGCATCGCTTAT	-46619661	True	NA	NA	False	AATAAA	-27	NA	46621351	46620465	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_46620901_46621256
transcript_75133.known	chr16	-	1591	1	FSM	ENSG00000261512.2	ENST00000574180.1	1591	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTAGAGATGGGGTTTC	-46624427	False	NA	NA	False	ATTAAA	-31	NA	46624451	46622860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_46622900_46624500
transcript_75139.known	chr16	-	4017	17	FSM	ENSG00000069329.18	ENST00000568784.6	4017	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	151.644526772317	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGAGCTTTTTTTCCCC	-46679602	True	NA	-6	True	AATAAA	-15	NA	46689147	46659676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_46660652_46661717_46661862_46662242_46662483_46662982_46663163_46668929_46669053_46671704_46671861_46672264_46672473_46674313_46674463_46674563_46674661_46676582_46676693_46677314_46677399_46678942_46679157_46680670_46680854_46681376_46681501_46682078_46682176_46683507_46683607_46688313
transcript_75140.known	chr16	-	6776	17	FSM	ENSG00000069329.18	ENST00000299138.12	6776	17	0	0	0	0	multi-exon	TRUE	canonical	3	454	junction_16	52.882978121509	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGGGAGAAAGAAAAAAA	-46679633	True	NA	NA	False	NA	NA	NA	46689178	46656131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_46660652_46661717_46661862_46662242_46662483_46662982_46663163_46668929_46669053_46671704_46671861_46672264_46672473_46674313_46674463_46674563_46674661_46676582_46676693_46677314_46677399_46678942_46679157_46680670_46680854_46681376_46681501_46682078_46682176_46683507_46683607_46689130
transcript_75147.nic	chr16	-	2707	16	NIC	ENSG00000069329.18	novel	5054	18	NA	NA	-45	-508	combination_of_known_junctions	FALSE	canonical	3	29	junction_14	152.182784834553	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACAAGCACTTATCTTGG	-46689213	False	NA	41	True	TTTAAA	-44	NA	46689239	46660184	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_46660652_46661717_46661862_46662242_46662483_46662982_46663163_46668929_46669053_46671704_46671861_46672264_46672473_46674313_46674463_46674563_46674661_46676582_46676693_46677314_46677399_46678942_46679157_46680670_46680854_46681376_46681521_46683507_46683607_46689130
transcript_75167.known	chr16	+	1615	7	FSM	ENSG00000091651.9	ENST00000219097.7	1615	7	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_4	35.8767179224757	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAGTTGTACTTGTCATC	46680590	True	NA	20	True	AATAAA	-18	NA	46689658	46698394	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_46689771_46690990_46691121_46692381_46692546_46693092_46693183_46695561_46695675_46696016_46696086_46697457
transcript_75172.nic	chr16	+	1687	7	NIC	ENSG00000091651.9	novel	1615	7	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	165.319891926733	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAGTTGTACTTGTCATC	46680577	True	NA	20	True	AATAAA	-18	NA	46689645	46698394	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_46689830_46690990_46691121_46692381_46692546_46693092_46693183_46695561_46695675_46696016_46696086_46697457
transcript_75173.nic	chr16	+	1024	6	ISM	ENSG00000091651.9	ENST00000219097.7	1615	7	-381	2344	-365	-169	5prime_fragment	FALSE	canonical	3	399	junction_4	32.5907962467934	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAAGAAGATAGTGGTTG	46689266	False	NA	NA	False	NA	NA	NA	46689277	46696050	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_46689771_46690990_46691121_46692381_46692546_46693092_46693183_46695561_46695675_46696016
transcript_75176.known	chr16	+	888	6	FSM	ENSG00000091651.9	ENST00000568364.6	888	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	191.473653540115	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGAATTGGAGGCCGG	46680628	True	NA	NA	False	NA	NA	NA	46689696	46697818	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_46689771_46690990_46691121_46692381_46692546_46693092_46693183_46696016_46696086_46697457
transcript_75182.known	chr16	+	1833	4	FSM	ENSG00000091651.9	ENST00000569239.5	1833	4	0	0	0	0	multi-exon	FALSE	canonical	3	456	junction_1	11.7851130197758	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCTGGCCGGGCGGGGGG	46680590	True	NA	NA	False	GGGGCT	-29	NA	46689658	46694519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_46689771_46690990_46691121_46692381_46692546_46693092
transcript_75185.known	chr16	-	6845	4	FSM	ENSG00000155330.10	ENST00000285697.9	6845	4	0	0	0	0	multi-exon	TRUE	canonical	3	232	junction_2	48.5249076935409	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCATGTATACTTACCAT	-46830037	True	NA	NA	False	AGTAAA	-18	NA	46831180	46796602	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_46803071_46809602_46809786_46824385_46824483_46831083
transcript_75186.known	chr16	-	6640	3	FSM	ENSG00000155330.10	ENST00000394806.6	6640	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	133.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATTATCATGTATACTTA	-46831139	False	NA	NA	False	AGTAAA	-14	NA	46831162	46796606	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_46803071_46824385_46824483_46831083
transcript_7519.nic	chr1	+	1820	10	NIC	ENSG00000066136.21	novel	1955	10	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_9	69.6006243763678	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATGGCATTTTCTTGA	40691621	True	NA	5	True	ATTAAA	-14	NA	40691654	40771107	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_40691868_40738835_40738949_40747533_40747606_40749572_40749687_40753150_40753247_40758120_40758295_40762887_40763047_40766595_40766704_40769355_40769416_40770396
transcript_7520.nic	chr1	+	2376	10	NIC	ENSG00000066136.21	novel	1955	10	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_9	69.6006243763678	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGAGTCTGGGTTTCTGT	NA	False	NA	18	True	AATAAA	-16	NA	40691594	40771603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_40691868_40738835_40738949_40747533_40747606_40749572_40749687_40753150_40753247_40758120_40758295_40762887_40763047_40766595_40766704_40769355_40769416_40770396
transcript_75206.known	chr16	+	3992	12	FSM	ENSG00000166123.14	ENST00000340124.9	3992	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	196.464115706484	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGTTTAACTTTCATTGT	46875889	True	NA	16	True	AATAAA	-17	NA	46884361	46931289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_46884468_46884693_46884959_46897647_46897738_46900681_46900791_46906841_46906976_46909683_46909928_46916627_46916708_46918620_46918758_46922241_46922417_46924388_46924545_46926924_46927038_46928906
transcript_7521.known	chr1	+	1911	10	FSM	ENSG00000066136.21	ENST00000456393.6	1911	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_9	80.8580527304363	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAGAGTCTGGGTTTCT	40689427	True	NA	16	True	AATAAA	-14	NA	40691742	40771601	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40691868_40738835_40738949_40747533_40747606_40749572_40749687_40753150_40753247_40758120_40758295_40762887_40763047_40766595_40766704_40769355_40769416_40770711
transcript_75226.nic	chr16	+	1479	6	ISM	ENSG00000166123.14	ENST00000340124.9	3992	12	-50	20881	-50	534	5prime_fragment	FALSE	canonical	0	0	junction_1	263.94211486612	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGCCAGGTGTGGTGGTA	46875839	True	NA	NA	False	NA	NA	NA	46884311	46910408	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_46884468_46884693_46884959_46897647_46897738_46900681_46900791_46906841_46906976_46909683
transcript_75232.known	chr16	-	3008	9	FSM	ENSG00000069345.12	ENST00000317089.10	3008	9	0	0	0	0	multi-exon	FALSE	canonical	3	773	junction_1	54.0248785283225	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCAGTGTAGTCTGTCTTT	-46949295	True	NA	-4	True	AATAAA	-17	NA	46973674	46955361	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_46957221_46959002_46959131_46959274_46959420_46964610_46964808_46967512_46967647_46968083_46968165_46971348_46971573_46971895_46971956_46973494
transcript_75247.known	chr16	-	7429	9	FSM	ENSG00000171208.10	ENST00000562435.6	7429	9	0	0	0	0	multi-exon	TRUE	canonical	3	77	junction_4	14.0356688476182	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAATATCTGATGCCATT	-47141566	True	NA	NA	False	TTTAAA	-32	NA	47143945	47077702	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_47083802_47086225_47086340_47109482_47109712_47122656_47122785_47122867_47122913_47128324_47128574_47129223_47129365_47131968_47132026_47143578
transcript_75248.known	chr16	-	3241	9	FSM	ENSG00000171208.10	ENST00000303155.9	3241	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	26.5506591255283	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTTTCACTGGATTTCAT	-47143690	False	NA	NA	False	AGTAAA	-19	NA	47143709	47081633	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_47083802_47086225_47086340_47109482_47109712_47122656_47122785_47122888_47122913_47128324_47128574_47129223_47129365_47131968_47132026_47143578
transcript_75264.nic	chr16	-	2284	8	NIC	ENSG00000171208.10	novel	7429	9	NA	NA	-97	159	combination_of_known_junctions	FALSE	canonical	2	25	junction_1	31.9316872880408	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTCCTTTTATTTTTCC	-47144023	False	NA	-12	True	AATAAA	-14	NA	47144042	47082830	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_47083802_47109482_47109712_47122656_47122785_47122867_47122913_47128324_47128574_47129223_47129365_47131968_47132026_47143578
transcript_75265.nic	chr16	-	2263	8	NIC	ENSG00000171208.10	novel	3241	9	NA	NA	-97	159	combination_of_known_junctions	FALSE	canonical	2	25	junction_1	38.0552766595206	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTCCTTTTATTTTTCC	-47144023	False	NA	-12	True	AATAAA	-14	NA	47144042	47082830	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_47083802_47109482_47109712_47122656_47122785_47122888_47122913_47128324_47128574_47129223_47129365_47131968_47132026_47143578
transcript_75267.nic	chr16	-	1332	8	ISM	ENSG00000171208.10	ENST00000303155.9	3241	9	-260	4593	-24	-2613	5prime_fragment	FALSE	canonical	3	35	junction_3	27.793700651737	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAGTTTGATGTAAAGGC	-47141590	True	NA	-1	True	NA	NA	NA	47143969	47086226	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_47086340_47109482_47109712_47122656_47122785_47122888_47122913_47128324_47128574_47129223_47129365_47131968_47132026_47143578
transcript_75273.known	chr16	-	3185	18	FSM	ENSG00000129636.13	ENST00000320640.11	3185	18	0	0	0	0	multi-exon	TRUE	canonical	3	321	junction_3	30.4268366338542	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTATTTCAGTGAGTTT	-47454902	True	NA	NA	False	AATAAA	-16	NA	47461063	47154390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_47155779_47158872_47158991_47161749_47161833_47162539_47162665_47218867_47218947_47237964_47238009_47258631_47258741_47260544_47260696_47311239_47311413_47313728_47313824_47365787_47365870_47375875_47375941_47428803_47428899_47451395_47451471_47452732_47452791_47454012_47454159_47459102_47459176_47460837
transcript_7528.known	chr1	+	2363	10	FSM	ENSG00000066136.21	ENST00000372652.5	2363	10	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	92.6216250780495	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGAGTCTGGGTTTCTGT	40708136	True	NA	18	True	AATAAA	-16	NA	40709356	40771603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40709617_40738835_40738949_40747533_40747606_40749572_40749687_40753150_40753247_40758120_40758295_40762887_40763047_40766595_40766704_40769355_40769416_40770396
transcript_75296.nic	chr16	+	3994	32	NIC	ENSG00000102893.16	novel	3829	32	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	133	junction_1	27.3252274301661	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCATACTGGAAATCAAAAG	47461071	True	NA	10	True	AATAAA	-16	NA	47461112	47699745	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_47461427_47463898_47463994_47497398_47497489_47499755_47499895_47502990_47503091_47511664_47511773_47515520_47515602_47547432_47547549_47580294_47580359_47587667_47587764_47588904_47589103_47593499_47593558_47594136_47594215_47596372_47596532_47610825_47610921_47641034_47641091_47641598_47641693_47648532_47648617_47649099_47649205_47650543_47650627_47650830_47650922_47660505_47660568_47660656_47660820_47661718_47661801_47663676_47663735_47665941_47666033_47669214_47669418_47689040_47689176_47693377_47693508_47696380_47696489_47698447_47698589_47699228
transcript_75297.nic	chr16	+	4249	32	NIC	ENSG00000102893.16	novel	3829	32	NA	NA	-10	255	combination_of_known_junctions	FALSE	canonical	3	133	junction_1	27.3252274301661	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTCTTTGAGCTCCTGC	47461071	True	NA	26	True	AATAAA	-17	NA	47461112	47700000	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_47461427_47463898_47463994_47497398_47497489_47499755_47499895_47502990_47503091_47511664_47511773_47515520_47515602_47547432_47547549_47580294_47580359_47587667_47587764_47588904_47589103_47593499_47593558_47594136_47594215_47596372_47596532_47610825_47610921_47641034_47641091_47641598_47641693_47648532_47648617_47649099_47649205_47650543_47650627_47650830_47650922_47660505_47660568_47660656_47660820_47661718_47661801_47663676_47663735_47665941_47666033_47669214_47669418_47689040_47689176_47693377_47693508_47696380_47696489_47698447_47698589_47699228
transcript_75298.nic	chr16	+	4414	32	NIC	ENSG00000102893.16	novel	3829	32	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	133	junction_1	27.3252274301661	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	47457738	True	NA	NA	False	NA	NA	NA	47461295	47700348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_47461427_47463898_47463994_47497398_47497489_47499755_47499895_47502990_47503091_47511664_47511773_47515520_47515602_47547432_47547549_47580294_47580359_47587667_47587764_47588904_47589103_47593499_47593558_47594136_47594215_47596372_47596532_47610825_47610921_47641034_47641091_47641598_47641693_47648532_47648617_47649099_47649205_47650543_47650627_47650830_47650922_47660505_47660568_47660656_47660820_47661718_47661801_47663676_47663735_47665941_47666033_47669214_47669418_47689040_47689176_47693377_47693508_47696380_47696489_47698447_47698589_47699228
transcript_7530.known	chr1	+	1202	10	FSM	ENSG00000066136.21	ENST00000372651.5	1202	10	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	72.9139523304316	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTAGGACACTGGTGCAC	40708322	False	NA	NA	False	NA	NA	NA	40709542	40770940	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40709617_40738835_40738949_40747533_40747606_40749572_40749687_40753150_40753247_40758120_40758295_40762887_40763047_40766595_40766704_40769355_40769416_40770708
transcript_75300.known	chr16	+	3829	32	FSM	ENSG00000102893.16	ENST00000566044.5	3829	32	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	36.3207471032092	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCATACTGGAAATCAAAAG	47457737	True	NA	10	True	AATAAA	-16	NA	47461294	47699745	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_47461427_47463881_47463994_47497398_47497489_47499755_47499895_47502990_47503091_47511664_47511773_47515520_47515602_47547432_47547549_47580294_47580359_47587667_47587764_47588904_47589103_47593499_47593558_47594136_47594215_47596372_47596532_47610825_47610921_47641034_47641091_47641598_47641693_47648532_47648617_47649099_47649205_47650543_47650627_47650830_47650922_47660505_47660568_47660656_47660820_47661718_47661801_47663676_47663735_47665941_47666033_47669214_47669418_47689040_47689176_47693377_47693508_47696380_47696489_47698447_47698589_47699228
transcript_75305.known	chr16	+	5464	31	FSM	ENSG00000102893.16	ENST00000299167.12	5464	31	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	44.5424766062937	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGCCAATGCCTGTTTT	47457768	True	NA	5	True	AGTAAA	-19	NA	47461325	47701523	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_47461427_47497398_47497489_47499755_47499895_47502990_47503091_47511664_47511773_47515520_47515602_47547432_47547549_47580294_47580359_47587667_47587764_47588904_47589103_47593499_47593558_47594136_47594215_47596372_47596532_47610825_47610921_47641034_47641091_47641598_47641693_47648532_47648617_47649099_47649205_47650543_47650627_47650830_47650922_47660505_47660568_47660656_47660820_47661718_47661801_47663676_47663735_47665941_47666033_47669214_47669418_47689040_47689176_47693377_47693508_47696380_47696489_47698447_47698589_47699228
transcript_75322.known	chr16	+	8195	15	FSM	ENSG00000102910.14	ENST00000285737.9	8195	15	0	0	0	0	multi-exon	TRUE	canonical	3	140	junction_2	22.8898203914102	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCAGGTTAGGATCATA	48240746	True	NA	NA	False	GATAAA	-18	NA	48244299	48357349	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_48244622_48252130_48252366_48256609_48256742_48258617_48258741_48261423_48261588_48262777_48262873_48270015_48270275_48277337_48277480_48296014_48296166_48299661_48299789_48303171_48303306_48334215_48334359_48347506_48347715_48348099_48348291_48351580
transcript_75325.known	chr16	-	2415	2	FSM	ENSG00000196470.12	ENST00000356721.3	2415	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTACTGTGTCTGCTTTAG	-48365807	True	NA	NA	False	ATTAAA	-25	NA	48365901	48360530	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_48362431_48365386
transcript_75326.known	chr16	-	2110	2	FSM	ENSG00000196470.12	ENST00000394725.3	2110	2	0	0	0	0	multi-exon	FALSE	canonical	3	454	junction_1	0	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTACTGTGTCTGCTTTAG	-48381993	True	NA	NA	False	ATTAAA	-25	NA	48385413	48360530	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_48362431_48385203
transcript_75328.known	chr16	-	7077	7	FSM	ENSG00000102921.8	ENST00000262384.4	7077	7	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_2	20.9841209807162	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGGACAGTGCCTTCTT	-48608570	True	NA	-4	True	AATAAA	-17	NA	48610180	48538725	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_48543262_48546146_48546255_48548006_48548115_48551385_48551483_48553538_48553670_48560753_48562445_48609774
transcript_75331.nic	chr16	-	1425	2	ISM	ENSG00000102921.8	ENST00000262384.4	7077	7	-49	22749	-49	483	5prime_fragment	FALSE	canonical	3	216	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTCCAAGAAGACAGAGAA	-48608619	True	NA	NA	False	AATAAA	-2	NA	48610229	48561474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_48562445_48609774
transcript_75332.known	chr16	+	2237	4	FSM	ENSG00000260086.4	ENST00000568150.4	2244	4	7	0	7	0	multi-exon	FALSE	canonical	0	0	junction_1	4.78423336480244	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAAATAAAAGACAAA	48623005	True	NA	NA	False	GATAAA	-37	NA	48623421	48746318	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_48623604_48741282_48741403_48744246_48744330_48744466
transcript_75334.known	chr16	-	2442	3	FSM	ENSG00000102924.12	ENST00000219197.11	2442	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGACCCAGTTGCTTCGG	-49281461	True	NA	-29	True	AATAAA	-23	NA	49281838	49277916	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_49279602_49280922_49281043_49281201
transcript_75337.known	chr16	+	1278	6	FSM	ENSG00000279249.3	ENST00000660181.1	1278	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	7.65767588763066	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGATTTATGTGTGTGA	49281909	True	NA	NA	False	AATAAA	-21	NA	49282059	49290472	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_49282233_49285482_49285624_49287366_49287476_49287829_49287990_49289537_49289656_49289895
transcript_75338.known	chr16	+	1090	5	FSM	ENSG00000279249.3	ENST00000659163.1	1090	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	5.40832691319598	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGATTTATGTGTGTGA	49281992	True	NA	NA	False	AATAAA	-21	NA	49282142	49290472	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_49282233_49285482_49285521_49287366_49287476_49289537_49289656_49289737
transcript_75339.known	chr16	+	1103	5	FSM	ENSG00000279249.3	ENST00000664244.1	1103	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	2.34520787991171	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGATTTATGTGTGTGA	49281886	True	NA	NA	False	AATAAA	-21	NA	49282036	49290472	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_49282233_49285520_49285624_49287366_49287476_49289537_49289656_49289895
transcript_75340.known	chr16	-	7968	8	FSM	ENSG00000102935.12	ENST00000563137.7	7968	8	0	0	0	0	multi-exon	FALSE	canonical	3	805	junction_4	45.2985560881743	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGCTGGTTCTCTTTCTT	-49854360	True	NA	3	True	AATAAA	-24	NA	49856112	49487523	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_49491305_49523623_49523740_49525362_49525495_49626169_49626255_49635659_49638875_49730770_49730972_49789486_49789547_49855734
transcript_75345.known	chr16	+	2965	7	FSM	ENSG00000205423.12	ENST00000458059.7	2965	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	85.9935398090397	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGACTTTTTCTTTATTGT	NA	False	NA	15	True	AATAAA	-22	NA	50024409	50037088	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_50025341_50025650_50025702_50026395_50026468_50029724_50029799_50033396_50033507_50034101_50034157_50035416
transcript_75347.known	chr16	+	656	6	FSM	ENSG00000205423.12	ENST00000562576.5	656	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	79.4521239489543	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTTTGCAGATGAAGT	50023111	True	NA	NA	False	NA	NA	NA	50025270	50035696	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_50025341_50026395_50026468_50029724_50029799_50033396_50033507_50034106_50034157_50035416
transcript_75349.known	chr16	+	1992	5	FSM	ENSG00000205423.12	ENST00000568890.5	1992	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	88.4657419569858	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGGACTTTTTCTTTAT	50023095	True	NA	12	True	AATAAA	-19	NA	50025254	50037085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_50025341_50026395_50026468_50033396_50033507_50034101_50034157_50035416
transcript_75350.known	chr16	+	1744	7	FSM	ENSG00000205423.12	ENST00000565457.5	1744	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	78.8662721883626	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGTGATTGGACTTTTTC	50023120	True	NA	7	True	AATAAA	-14	NA	50025279	50037080	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_50025341_50026395_50026468_50029724_50029799_50033396_50033507_50034101_50034157_50035416_50036176_50036467
transcript_75354.known	chr16	+	4416	15	FSM	ENSG00000155393.14	ENST00000299192.8	4416	15	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	8.59757915618919	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGTGTGATTTTCTG	50063667	True	NA	NA	False	AATAAA	-20	NA	50065969	50107272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_50066270_50066366_50066540_50068779_50068868_50070177_50070291_50072604_50072715_50075570_50075712_50078740_50079019_50083936_50084028_50084133_50084292_50084568_50084652_50086214_50086352_50094704_50094794_50100229_50100374_50102258_50102436_50104938
transcript_75358.known	chr16	+	8121	13	FSM	ENSG00000121274.14	ENST00000436909.8	8121	13	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	8.99845665779539	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGGTATGAGCCCTTAT	50152482	True	NA	NA	False	AATAAA	-29	NA	50152910	50235310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_50153033_50153746_50154260_50211322_50211447_50214220_50214268_50216074_50216196_50217555_50217664_50222305_50222435_50223173_50223388_50224656_50224784_50224890_50224995_50225097_50225286_50227838_50228004_50229151
transcript_75371.known	chr16	-	2145	17	FSM	ENSG00000166164.16	ENST00000394689.2	2145	17	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_4	105.422198059754	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGGAATGTGCTTGGGGC	-50368160	False	NA	-29	True	AATAAA	-21	NA	50368779	50319029	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_50319267_50319886_50320031_50320247_50320392_50320662_50320778_50321981_50322039_50323586_50323699_50325747_50325884_50326283_50326392_50328668_50328745_50333573_50333698_50334710_50334896_50339975_50340087_50350022_50350168_50354424_50354483_50354792_50354923_50368089_50368299_50368725
transcript_75378.nic	chr16	-	1128	7	ISM	ENSG00000166164.16	ENST00000394689.2	2145	17	-236	15681	-27	0	5prime_fragment	FALSE	canonical	3	435	junction_4	42.4529150942547	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAAGATCTTTGGGATGT	-50357731	True	NA	NA	False	AATAAA	-3	NA	50369015	50334710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_50334896_50339975_50340087_50350022_50350168_50354424_50354483_50354792_50354923_50368089_50368299_50368725
transcript_75379.nic	chr16	-	445	2	ISM	ENSG00000166164.16	ENST00000567826.1	740	5	-95	18127	-27	-18127	5prime_fragment	FALSE	canonical	3	562	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAGAAGCAGATTCCAGG	-50357731	True	NA	17	True	AAAAAG	-10	NA	50369015	50368143	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_50368299_50368725
transcript_75380.known	chr16	-	740	5	FSM	ENSG00000166164.16	ENST00000567826.1	740	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	224.618982946678	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCAATCCTATATACACAA	-50357636	True	NA	NA	False	ACTAAA	-8	NA	50368920	50350016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_50350168_50354424_50354480_50354792_50354923_50368089_50368299_50368725
transcript_75381.known	chr16	+	17039	10	FSM	ENSG00000140807.7	ENST00000268459.6	17039	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	4.00308522992263	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCGTTGCTCAGATCTCA	50547618	True	NA	8	True	AATAAA	-16	NA	50548395	50649249	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_50548579_50548716_50548750_50549421_50549556_50608293_50608361_50621601_50621709_50625484_50625581_50630185_50630334_50630825_50630911_50632280_50632409_50633191
transcript_75385.known	chr16	+	3513	18	FSM	ENSG00000083799.18	ENST00000569418.5	3513	18	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	13.8148909178706	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAAGGATATGAAATCATT	50740724	True	NA	3	True	AATAAA	-17	NA	50742049	50796881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_50742125_50742761_50742842_50749575_50750203_50751603_50751907_50754318_50754425_50776178_50776278_50777824_50777942_50779664_50780045_50781245_50781412_50782324_50782467_50784328_50784452_50786854_50786947_50787785_50787853_50791557_50791691_50792596_50792706_50793545_50793665_50794211_50794429_50796323
transcript_75386.known	chr16	+	3536	18	FSM	ENSG00000083799.18	ENST00000398568.6	3536	18	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	12.2607201874756	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAGGATATGAAATCATTT	50740794	True	NA	4	True	AATAAA	-18	NA	50742119	50796882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_50742217_50742761_50742842_50749575_50750203_50751603_50751907_50754318_50754425_50776178_50776278_50777824_50777942_50779664_50780045_50781245_50781412_50782324_50782467_50784328_50784452_50786854_50786947_50787785_50787853_50791557_50791691_50792596_50792706_50793545_50793665_50794211_50794429_50796323
transcript_75387.known	chr16	+	1307	5	FSM	ENSG00000261241.8	ENST00000668895.1	1307	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGTGTCTCACAGTCTG	NA	False	NA	2	True	AATAAA	-14	NA	50880081	50901061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_50880262_50884211_50884278_50884481_50884742_50893660_50893863_50900462
transcript_75388.known	chr16	+	1354	5	FSM	ENSG00000261241.8	ENST00000663343.1	1354	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.82915619758885	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGTGTCTCACAGTCTG	NA	False	NA	2	True	AATAAA	-14	NA	50880079	50901061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_50880262_50884211_50884323_50884481_50884742_50893660_50893863_50900462
transcript_75389.known	chr16	+	2248	2	FSM	ENSG00000261241.8	ENST00000576842.2	2264	2	16	0	16	0	multi-exon	FALSE	canonical	3	5	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGGTCTGAGAGTCCCT	50880178	True	NA	NA	False	AATAAA	-17	NA	50880208	50884101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_50880262_50881906
transcript_75394.known	chr16	-	5134	3	FSM	ENSG00000103449.13	ENST00000251020.9	5134	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	94.5	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGTCTGTGTTTTTAG	-51151260	False	NA	17	True	GATAAA	-7	NA	51151270	51135981	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_51137553_51138687_51142146_51151165
transcript_75396.known	chr16	+	1377	1	FSM	ENSG00000224578.5	ENST00000562726.1	1377	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2585	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTTTGCAGAACACCTAT	51645744	False	NA	NA	False	GATAAA	-29	NA	51645755	51647132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_51645800_51647100
transcript_75397.known	chr16	+	622	3	FSM	ENSG00000260057.6	ENST00000569993.6	622	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCCAGTGGGTGTCTGC	NA	False	NA	NA	False	AATAAA	-21	NA	51762333	51772646	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_51762576_51771563_51771673_51772375
transcript_7540.known	chr1	-	1687	1	FSM	ENSG00000272145.1	ENST00000606277.1	1687	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAAAAAAGTTACTT	-40691503	True	NA	NA	False	NA	NA	NA	40692066	40690379	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_40690400_40692100
transcript_75406.nic	chr16	+	2159	4	ISM	ENSG00000177200.18	ENST00000447540.6	11547	39	-12	104742	-12	0	5prime_fragment	FALSE	canonical	1	3	junction_1	9.89949493661167	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTATTACAATTTTTTC	53054200	True	NA	NA	False	ATTAAA	-17	NA	53054978	53222755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_53055078_53155925_53157542_53209481_53209814_53222643
transcript_75409.known	chr16	+	11504	39	FSM	ENSG00000177200.18	ENST00000564845.5	11504	39	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	7.3757482366104	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGAAGTTTAATTATTT	NA	False	NA	15	True	ATTAAA	-27	NA	53130920	53327451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_53131059_53155925_53157542_53209481_53209814_53222643_53222756_53226365_53226513_53227395_53227465_53227547_53227604_53228982_53229101_53231418_53231506_53231646_53231785_53235184_53235307_53238342_53238587_53242839_53243017_53245335_53245480_53245594_53245851_53247292_53247504_53249870_53250067_53254437_53254606_53255599_53255780_53262986_53263098_53267293_53267491_53267926_53268127_53273625_53273786_53274212_53274303_53285595_53285700_53286225_53286344_53287956_53288015_53291724_53291768_53292832_53293053_53296955_53297159_53303719_53304626_53306236_53306398_53307680_53307906_53308685_53308855_53314376_53314517_53314822_53315045_53318211_53318341_53321525_53321631_53324019
transcript_7541.known	chr1	+	3335	11	FSM	ENSG00000117013.17	ENST00000506017.1	3335	11	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_1	5.95315042645489	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGATTGTTCTTGGTTTT	40818872	True	NA	8	True	ATTAAA	-13	NA	40818963	40840451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40818991_40819346_40819473_40819874_40819986_40820164_40820261_40822313_40822403_40824096_40824259_40831083_40831305_40833013_40833114_40834966_40835099_40837664_40837795_40838310
transcript_75413.known	chr16	+	703	3	FSM	ENSG00000177200.18	ENST00000565442.1	703	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	12	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTATTACAATTTTTTC	53206375	True	NA	NA	False	ATTAAA	-17	NA	53208450	53222755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_53208710_53209481_53209814_53222643
transcript_75416.known	chr16	+	720	2	FSM	ENSG00000177200.18	ENST00000561869.1	720	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAATCATGTTAGAGTC	53054260	True	NA	NA	False	NA	NA	NA	53055038	53121980	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_53055078_53121299
transcript_75418.nic	chr16	+	569	2	ISM	ENSG00000177200.18	ENST00000565442.1	703	3	-12	12976	-12	-34	5prime_fragment	FALSE	canonical	1	3	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGTTCTAAGTTAAAAGAG	53206363	True	NA	NA	False	AAAACA	-5	NA	53208438	53209779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_53208710_53209481
transcript_75425.known	chr16	+	4854	22	FSM	ENSG00000103479.17	ENST00000262133.11	4854	22	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_13	33.6276799925003	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGTTTGGTTATATTG	53431036	True	NA	9	True	AATAAA	-15	NA	53434470	53491648	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_53434797_53439015_53439147_53442657_53442859_53447041_53447107_53451702_53451832_53453451_53453613_53453704_53453770_53454655_53454843_53459450_53459618_53461740_53461851_53462551_53462656_53464225_53464364_53465437_53465603_53467057_53467170_53469915_53470186_53470382_53470664_53470745_53470923_53479153_53479226_53479885_53479992_53480566_53480770_53481670_53481836_53490129
transcript_7543.known	chr1	-	1310	1	FSM	ENSG00000179862.7	ENST00000372638.4	1310	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGCCGTTTTCATTTCC	-40859587	True	NA	-4	True	AATAAA	-17	NA	40862363	40861053	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_40861100_40862400
transcript_75436.nic	chr16	+	2937	19	ISM	ENSG00000103479.17	ENST00000262133.11	4854	22	-32	11719	21	-826	5prime_fragment	FALSE	canonical	3	182	junction_13	33.4263516952467	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGCAGCAGTGATAGCA	53431004	True	NA	NA	False	GATAAA	-22	NA	53434438	53479929	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_53434797_53439015_53439147_53442657_53442859_53447041_53447107_53451702_53451832_53453451_53453613_53453704_53453770_53454655_53454843_53459450_53459618_53461740_53461851_53462551_53462656_53464225_53464364_53465437_53465603_53467057_53467170_53469915_53470186_53470382_53470664_53470745_53470923_53479153_53479226_53479885
transcript_7544.known	chr1	+	2947	20	FSM	ENSG00000171793.16	ENST00000649124.1	2947	20	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	128.304843883576	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATCAGTAAGGCAGAAC	40972594	True	NA	NA	False	NA	NA	NA	40979720	41012539	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40979830_40980885_40981044_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41007448_41007546_41008658_41008715_41008793_41008891_41009444_41009590_41010160_41010255_41011657
transcript_75445.nic	chr16	+	2823	17	ISM	ENSG00000103479.17	ENST00000262133.11	4854	22	-32	20724	21	667	5prime_fragment	FALSE	canonical	3	182	junction_13	32.7774217259381	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTACCATTTGGAATTGTA	53431004	True	NA	NA	False	NA	NA	NA	53434438	53470924	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_53434797_53439015_53439147_53442657_53442859_53447041_53447107_53451702_53451832_53453451_53453613_53453704_53453770_53454655_53454843_53459450_53459618_53461740_53461851_53462551_53462656_53464225_53464364_53465437_53465603_53467057_53467170_53469915_53470186_53470382_53470664_53470745
transcript_75446.known	chr16	+	6326	21	FSM	ENSG00000103479.17	ENST00000680543.1	6326	21	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_20	57.7330927631631	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAGCATTTATAAATTA	NA	False	NA	-11	True	NA	NA	NA	53434417	53491628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_53434797_53439015_53439147_53442657_53442859_53447041_53447107_53451702_53451832_53453451_53453613_53453704_53453770_53454655_53454843_53459450_53459618_53461740_53461851_53462551_53462656_53464225_53464364_53465437_53467170_53469915_53470664_53470745_53470923_53479153_53479226_53479885_53479992_53480566_53480770_53481670_53481836_53490129_53490302_53490514
transcript_75448.known	chr16	-	2133	11	FSM	ENSG00000166971.17	ENST00000300245.8	2133	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	57.4251686980543	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTTAAATAACATTTTCT	-53502187	True	NA	NA	False	AATAAA	-20	NA	53503244	53491378	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_53492523_53492692_53492754_53494137_53494246_53494338_53494438_53494516_53494606_53495072_53495174_53495261_53495327_53498390_53498597_53500217_53500330_53501520_53501571_53503146
transcript_75450.known	chr16	-	2384	10	FSM	ENSG00000166971.17	ENST00000394657.12	2384	10	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	29.6577181676807	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGAAGTTTTGTATTTA	-53502152	True	NA	1	True	ATTAAA	-19	NA	53503209	53491039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_53492520_53492692_53492754_53494137_53494246_53494338_53494438_53494516_53494606_53495072_53495174_53495261_53495327_53498390_53498597_53500217_53500330_53503146
transcript_75454.nic	chr16	-	2280	10	NIC	ENSG00000166971.17	novel	2133	11	NA	NA	212	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_9	39.5699100046712	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTTAAATAACATTTTCT	-53501937	False	NA	NA	False	AATAAA	-20	NA	53502994	53491378	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_53492523_53492692_53492754_53494137_53494246_53494338_53494438_53494516_53494606_53495072_53495174_53495261_53495327_53498390_53498597_53500217_53500330_53502699
transcript_75455.nic	chr16	-	2121	10	NIC	ENSG00000166971.17	novel	2133	11	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	28.701529188839	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTTAAATAACATTTTCT	NA	False	NA	NA	False	AATAAA	-20	NA	53503282	53491378	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_53492523_53492692_53492754_53494137_53494246_53494338_53494438_53494516_53494606_53495072_53495174_53495261_53495327_53498390_53498597_53500217_53500330_53503146
transcript_75456.nic	chr16	-	2167	10	NIC	ENSG00000166971.17	novel	2133	11	NA	NA	0	-59	intron_retention	FALSE	canonical	3	37	junction_9	39.5699100046712	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCTTTGCCATTTATGC	-53502152	True	NA	NA	False	AATAAA	-12	NA	53503209	53491706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_53492523_53492692_53492754_53494137_53494246_53494338_53494438_53494516_53494606_53495072_53495174_53495261_53495327_53498390_53498597_53500217_53500330_53502699
transcript_75458.nic	chr16	-	1793	10	NIC	ENSG00000166971.17	novel	2133	11	NA	NA	-38	-59	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	28.701529188839	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCTTTGCCATTTATGC	NA	False	NA	NA	False	AATAAA	-12	NA	53503282	53491706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_53492523_53492692_53492754_53494137_53494246_53494338_53494438_53494516_53494606_53495072_53495174_53495261_53495327_53498390_53498597_53500217_53500330_53503146
transcript_75461.known	chr16	-	1162	10	FSM	ENSG00000166971.17	ENST00000570004.5	1162	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	47.0909285909246	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTGCCAGTGTTTTCCA	-53502166	True	NA	-1	True	AGTAAA	-17	NA	53503223	53492304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_53492520_53492692_53492754_53494137_53494246_53494338_53494438_53494516_53494606_53495072_53495174_53495261_53495327_53498390_53498597_53500217_53500330_53503117
transcript_7547.known	chr1	+	2840	19	FSM	ENSG00000171793.16	ENST00000650070.2	2840	19	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_11	25.1136306503947	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTTTGCTTCTCATTCT	40972569	True	NA	NA	False	AATAAA	-22	NA	40979695	41012565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40979830_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41007448_41007546_41008658_41008715_41008793_41008891_41009444_41009590_41010160_41010255_41011657
transcript_75473.known	chr16	-	6678	26	FSM	ENSG00000103494.16	ENST00000621565.5	6678	26	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	18.0423501795082	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAGGCCACACTGAAAT	-53702613	True	NA	NA	False	CATAAA	-20	NA	53703841	53599253	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_53602189_53605480_53605615_53610966_53611052_53619024_53619209_53636438_53636513_53637694_53637855_53638309_53638412_53641032_53641117_53641284_53641476_53645624_53646004_53648963_53649116_53652534_53652988_53656471_53656590_53657452_53657633_53658413_53658465_53658771_53658879_53664869_53665010_53671509_53671584_53672869_53673017_53675016_53675123_53686432_53686577_53687862_53687966_53692065_53692365_53696150_53696296_53700638_53700731_53703802
transcript_75474.known	chr16	-	7725	25	FSM	ENSG00000103494.16	ENST00000262135.9	7725	25	0	0	0	0	multi-exon	TRUE	canonical	2	11	junction_6	18.421709339798	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCCTACTATCTAATTTG	-53702661	True	NA	NA	False	AATAAA	-21	NA	53703889	53598152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_53602189_53605480_53605615_53610966_53611052_53619024_53619209_53636438_53636513_53637694_53637855_53641032_53641117_53641284_53641476_53645624_53646004_53648963_53649116_53652534_53652988_53656471_53656590_53657452_53657633_53658413_53658465_53658771_53658879_53664869_53665010_53671509_53671584_53672869_53673017_53675016_53675123_53686432_53686577_53687862_53687966_53692065_53692365_53696150_53696296_53700638_53700731_53703802
transcript_75477.known	chr16	-	893	3	FSM	ENSG00000103494.16	ENST00000566096.5	893	3	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_2	8	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGATTTATGTGCAAAAA	NA	False	NA	NA	False	AAGAAA	-13	NA	53703938	53695630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_53696296_53700638_53700731_53703802
transcript_75478.known	chr16	-	1107	9	FSM	ENSG00000103494.16	ENST00000562230.5	1107	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_8	24.009112853248	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGGGAACTTTTAAAGGAAAA	-53702616	True	NA	NA	False	NA	NA	NA	53703844	53671550	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_53671584_53672869_53673017_53675016_53675123_53686432_53686577_53687862_53687966_53692065_53692365_53696150_53696296_53700638_53700727_53703802
transcript_75483.known	chr16	+	11573	9	FSM	ENSG00000140718.21	ENST00000471389.6	11573	9	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_8	22.1345318450606	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTATGCTTGGTGTTA	53698901	True	NA	NA	False	AATAAA	-14	NA	53704155	54121941	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_53704230_53810139_53810218_53825863_53826492_53844154_53844299_53873785_53873866_53879843_53879988_53888831_53888952_53933984_53934110_54111761
transcript_75492.known	chr16	+	2472	11	FSM	ENSG00000140718.21	ENST00000637845.1	2472	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	96.160334857986	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGTACCCACAAAAATTAAA	53698903	True	NA	NA	False	CATAAA	-15	NA	53704157	54121902	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_53704230_53810139_53810218_53825863_53826492_53844154_53844299_53873785_53873866_53879843_53879988_53888831_53888952_53933984_53934110_54111761_54111890_54118380_54118807_54121375
transcript_75493.known	chr16	-	2625	4	FSM	ENSG00000177508.12	ENST00000329734.4	2625	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2.05480466765633	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGCCTGTCTGCCCCCTCG	-54286685	True	NA	2	True	AATAAA	-26	NA	54286787	54283303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_54283741_54284245_54284313_54284496_54285614_54285783
transcript_75495.known	chr16	-	1603	5	FSM	ENSG00000245694.11	ENST00000502066.7	1603	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	9.36416040016402	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTAACCTTTTGGGGTTT	-54928549	True	NA	NA	False	ATTAAA	-2	NA	54928838	54917967	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_54919210_54920297_54920411_54923584_54923651_54925100_54925214_54928769
transcript_75496.known	chr16	-	735	2	FSM	ENSG00000245694.11	ENST00000560208.1	735	2	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATTACTTTGAATAATT	-54928979	True	NA	NA	False	AATAAA	-34	NA	54929149	54924858	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_54925214_54928769
transcript_75497.nnic	chr16	+	2827	14	NNC	ENSG00000087245.13	novel	3514	13	NA	NA	-53	0	intron_retention	FALSE	non_canonical	1	3	junction_1	100.206237035568	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTTTGCCATCTGTTT	NA	False	NA	16	True	AATAAA	-16	NA	55479144	55506237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_55479276_55479561_55479633_55482908_55483136_55484015_55484165_55485298_55485428_55485603_55485778_55488542_55488717_55489650_55489825_55491800_55491957_55493157_55493294_55496925_55497063_55498288_55498449_55502778_55502889_55505338
transcript_75500.known	chr16	+	3514	13	FSM	ENSG00000087245.13	ENST00000219070.9	3514	13	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_1	36.8852386915597	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATGGCTCAAGAGAAGTG	55477216	True	NA	25	True	AATAAA	-38	NA	55479197	55506691	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_55479633_55482908_55483136_55484015_55484165_55485298_55485428_55485603_55485778_55488542_55488717_55489650_55489825_55491800_55491957_55493157_55493294_55496925_55497063_55498288_55498449_55502778_55502889_55505338
transcript_75518.known	chr16	+	5313	14	FSM	ENSG00000087253.13	ENST00000262134.10	5313	14	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_12	7.23649527777953	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTTCTTCTGGTGGGTT	55508303	True	NA	NA	False	ATTAAA	-17	NA	55509071	55586666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_55509353_55525507_55525648_55528376_55528595_55529834_55529948_55531913_55531975_55532823_55532883_55534442_55534478_55537577_55537633_55545734_55545818_55549276_55549403_55550948_55551103_55574630_55574730_55579108_55579245_55582913
transcript_75525.known	chr16	+	5933	15	FSM	ENSG00000103546.19	ENST00000568943.6	5933	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.82065180664829	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTAGCAGAGTTCTGAA	NA	False	NA	NA	False	AATAAA	-22	NA	55655987	55706192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_55656170_55656643_55656969_55669564_55669697_55671937_55672176_55685142_55685282_55691917_55692053_55694009_55694114_55695277_55695403_55696224_55696338_55697896_55698026_55698468_55698569_55699553_55699655_55700138_55700307_55701862_55701935_55702322
transcript_75526.known	chr16	-	1946	14	FSM	ENSG00000198848.13	ENST00000360526.8	1946	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_13	2.21880078490092	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGCTTGTGTCTTGTAC	NA	False	NA	NA	False	AATAAA	-20	NA	55833096	55802850	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_55803233_55803528_55803602_55806332_55806465_55810516_55810665_55810926_55811011_55812902_55813044_55816923_55816963_55819534_55819640_55820371_55820480_55821367_55821522_55823549_55823684_55826150_55826296_55828766_55828975_55833003
transcript_7553.nic	chr1	+	2491	19	NIC	ENSG00000171793.16	novel	2037	18	NA	NA	-117	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	86.3552095835695	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGGAAACTTGTCACTT	40979916	False	NA	NA	False	TTTAAA	-40	NA	40979990	41011779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_40980562_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41007448_41007546_41008658_41008715_41008793_41008891_41009444_41009590_41010160_41010255_41011657
transcript_75531.known	chr16	-	3607	14	FSM	ENSG00000159461.15	ENST00000290649.10	3607	14	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_10	13.8832835500172	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGTTGTGTGTGGCT	-56424202	True	NA	-6	True	AATAAA	-13	NA	56425545	56361451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_56363057_56363920_56364106_56367443_56367528_56369192_56369328_56385918_56386023_56389184_56389376_56401732_56401844_56402984_56403119_56404908_56405042_56405203_56405245_56407963_56408117_56409423_56409589_56414251_56414345_56425072
transcript_75536.known	chr16	-	3688	18	FSM	ENSG00000125124.14	ENST00000682470.1	3688	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	47.6457516160552	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTATTGTACATGGATCTT	-56519213	True	NA	NA	False	TATAAA	-16	NA	56520049	56465639	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_56466975_56484760_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498569_56499777_56499908_56500853_56501026_56501352_56501498_56502316_56502457_56502672_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
transcript_75539.known	chr16	-	2540	18	FSM	ENSG00000125124.14	ENST00000682855.1	2540	18	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_16	45.6978946763926	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTCTTCCTAAATCTTGG	-56519188	True	NA	NA	False	AATAAA	-21	NA	56520024	56470402	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_56470615_56484760_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498569_56499777_56499908_56500853_56501026_56501352_56501498_56502316_56502457_56502672_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
transcript_7554.nic	chr1	+	3270	19	NIC	ENSG00000171793.16	novel	2037	18	NA	NA	-110	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	86.3552095835695	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTTTGCTTCTCATTCT	40979977	True	NA	NA	False	AATAAA	-22	NA	40979997	41012565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_40980562_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41007448_41007546_41008658_41008715_41008793_41008891_41009444_41009590_41010160_41010255_41011657
transcript_75542.known	chr16	-	2704	17	FSM	ENSG00000125124.14	ENST00000245157.11	2704	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	37.0729327643498	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGTTGATTGATTATA	-56519188	True	NA	0	True	ATTAAA	-17	NA	56520024	56484384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498569_56499777_56499908_56500853_56501026_56501352_56501498_56502316_56502457_56502672_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
transcript_75544.known	chr16	-	2928	17	FSM	ENSG00000125124.14	ENST00000682493.1	2928	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	48.3689837990215	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAATCAGAATTGCCCAT	-56519259	True	NA	-10	True	ATTAAA	-45	NA	56520095	56484356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498694_56499777_56499908_56500853_56501026_56501352_56501498_56502316_56502457_56502672_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
transcript_75545.known	chr16	-	2992	16	FSM	ENSG00000125124.14	ENST00000684020.1	2992	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	38.210295296774	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAATCAGAATTGCCCAT	-56519232	True	NA	-10	True	ATTAAA	-45	NA	56520068	56484356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498569_56499777_56499908_56500853_56501026_56501352_56501498_56502316_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
transcript_75547.known	chr16	-	2611	16	FSM	ENSG00000125124.14	ENST00000683020.1	2611	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	50.3245466944313	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAATCAGAATTGCCCAT	-56519239	True	NA	-10	True	ATTAAA	-45	NA	56520075	56484356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498569_56499777_56499908_56501352_56501498_56502316_56502457_56502672_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
transcript_75551.known	chr16	-	3811	15	FSM	ENSG00000125124.14	ENST00000684402.1	3811	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	39.5513744955823	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAATCAGAATTGCCCAT	-56519232	True	NA	-10	True	ATTAAA	-45	NA	56520068	56484356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498569_56499777_56499908_56500853_56501026_56501352_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
transcript_75554.known	chr16	-	3639	14	FSM	ENSG00000125124.14	ENST00000682705.1	3639	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	53.7517854389026	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAATCAGAATTGCCCAT	-56519232	True	NA	-10	True	ATTAAA	-45	NA	56520068	56484356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498569_56499777_56499908_56501352_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
transcript_75555.known	chr16	-	5347	13	FSM	ENSG00000125124.14	ENST00000683396.1	5347	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	42.5476856662681	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAATCAGAATTGCCCAT	-56519232	True	NA	-10	True	ATTAAA	-45	NA	56520068	56484356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56499908_56500853_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
transcript_75559.known	chr16	-	2610	17	FSM	ENSG00000125124.14	ENST00000682658.1	2610	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	49.0750382068114	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATTGAGTTTGTACTTT	-56519188	True	NA	-65	True	TATAAA	-22	NA	56520024	56484449	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498569_56499777_56499908_56500853_56501026_56501352_56501498_56502316_56502457_56502701_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
transcript_7556.nic	chr1	+	1972	18	ISM	ENSG00000171793.16	ENST00000650070.2	2840	19	-45	2316	-37	660	5prime_fragment	FALSE	canonical	3	348	junction_11	25.8408758569036	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGCGTAAGTGGTACTTTA	40972524	True	NA	5	True	AATAAA	-15	NA	40979650	41010249	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_40979830_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41007448_41007546_41008658_41008715_41008793_41008891_41009444_41009590_41010160
transcript_75560.known	chr16	-	4267	16	FSM	ENSG00000125124.14	ENST00000683170.1	4267	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	50.5580414529237	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGTTGATTGATTATA	-56519170	True	NA	0	True	ATTAAA	-17	NA	56520006	56484384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56499908_56500853_56501026_56501352_56501498_56501944_56502457_56502672_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
transcript_75565.known	chr16	+	4587	13	FSM	ENSG00000087263.17	ENST00000566157.6	4587	13	0	0	0	0	multi-exon	TRUE	canonical	3	378	junction_6	38.2368350619603	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGGTTTCTCTCTTTAT	56446464	True	NA	NA	False	GATAAA	-24	NA	56451553	56479104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_56451767_56453262_56453409_56458547_56458595_56462533_56462635_56466151_56466269_56466875_56466968_56467164_56467294_56467904_56468019_56470002_56470083_56470486_56470792_56474827_56474951_56475506_56475566_56476043
transcript_75578.known	chr16	-	4393	7	FSM	ENSG00000167005.14	ENST00000300291.10	4393	7	0	0	0	0	multi-exon	TRUE	canonical	3	1092	junction_4	68.3073121187541	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTGTGATTGTTTTGG	-56434239	True	NA	-6	True	AATAAA	-18	NA	56451332	56429132	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_56432734_56434330_56434446_56434753_56434830_56439656_56439747_56446625_56446690_56447788_56447990_56451086
transcript_75587.known	chr16	+	406	3	FSM	ENSG00000087250.9	ENST00000200691.5	406	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCAAGGACTGGTCTCT	56589505	True	NA	NA	False	AATAAA	-15	NA	56589527	56591085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_56589622_56589869_56589936_56590839
transcript_75588.known	chr16	+	401	3	FSM	ENSG00000125148.7	ENST00000245185.6	401	3	0	0	0	0	multi-exon	FALSE	canonical	3	1383	junction_1	44	329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTCTCTGGTTTCCTTT	56596158	True	NA	27	True	AATAAA	-16	NA	56608583	56609497	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_56608684_56608991_56609058_56609262
transcript_75589.known	chr16	+	186	3	FSM	ENSG00000260549.3	ENST00000566367.2	186	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	3	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGGACAGCCCTGCTCC	56617422	False	NA	NA	False	NA	NA	NA	56617562	56618680	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_56617591_56618178_56618245_56618588
transcript_7559.known	chr1	+	2855	18	FSM	ENSG00000171793.16	ENST00000498694.2	2855	18	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_11	25.4841018355912	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAAGGCAGAACAAGAGAC	40972614	True	NA	NA	False	AATAAA	-3	NA	40979740	41012546	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40979830_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41007448_41007546_41008658_41008891_41009444_41009590_41010160_41010255_41011657
transcript_75590.known	chr16	+	704	3	FSM	ENSG00000169715.15	ENST00000306061.10	704	3	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_1	2.5	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTACTCTGTTCTTCTTTG	56625334	False	NA	28	True	AATAAA	-18	NA	56625474	56627112	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_56625880_56626465_56626532_56626879
transcript_75591.known	chr16	+	332	2	FSM	ENSG00000169715.15	ENST00000568293.1	332	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTACTCTGTTCTTCTTTG	56618145	True	NA	28	True	AATAAA	-18	NA	56625780	56627112	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_56625880_56626879
transcript_75592.known	chr16	+	398	3	FSM	ENSG00000205364.4	ENST00000379818.4	398	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	8.5	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTACTCTGTTCTTCTTTG	56632544	True	NA	6	True	AATAAA	-17	NA	56632658	56633981	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_56632760_56633339_56633406_56633750
transcript_75593.known	chr16	+	186	3	FSM	ENSG00000255986.6	ENST00000444023.4	186	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	4	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGAACAGCTCTTCTCC	56635797	False	NA	-60	True	NA	NA	NA	56635817	56636943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_56635846_56636438_56636505_56636851
transcript_75594.known	chr16	+	425	3	FSM	ENSG00000198417.7	ENST00000334350.7	425	3	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_2	28	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGACTTCAGTTTCCCTT	56650422	True	NA	15	True	ATTAAA	-15	NA	56657958	56659303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_56658087_56658674_56658741_56659072
transcript_75595.known	chr16	+	416	3	FSM	ENSG00000198417.7	ENST00000568475.1	416	3	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	193.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTTCAGTTTCCCTTAT	56650475	True	NA	17	True	ATTAAA	-17	NA	56658011	56659305	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_56658087_56658674_56658783_56659072
transcript_75596.known	chr16	-	406	3	FSM	ENSG00000125144.14	ENST00000444837.6	406	3	0	0	0	0	multi-exon	FALSE	canonical	3	580	junction_2	97.5	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTCTGGTTCCTGTTGTGT	-56642030	True	NA	-7	True	ATTAAA	-18	NA	56668065	56666730	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_56666971_56667311_56667378_56667965
transcript_75598.known	chr16	-	305	2	FSM	ENSG00000125144.14	ENST00000569500.5	305	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCGTTCTGGTTCCTGTT	-56641999	True	NA	-11	True	ATTAAA	-14	NA	56668034	56666734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_56666971_56667965
transcript_75600.known	chr16	+	397	3	FSM	ENSG00000205358.4	ENST00000332374.5	397	3	0	0	0	0	multi-exon	FALSE	canonical	3	677	junction_2	31	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCGTTCTGGTTCCTGTT	56667059	True	NA	14	True	ATTAAA	-14	NA	56669813	56671129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_56669913_56670505_56670572_56670897
transcript_75601.known	chr16	+	697	2	FSM	ENSG00000205358.4	ENST00000569155.1	697	2	0	0	0	0	multi-exon	FALSE	canonical	3	739	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCGTTCTGGTTCCTGTT	56667085	True	NA	14	True	ATTAAA	-14	NA	56669839	56671129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_56669913_56670505
transcript_75602.known	chr16	+	404	3	FSM	ENSG00000187193.9	ENST00000394485.5	404	3	0	0	0	0	multi-exon	FALSE	canonical	3	2353	junction_2	272	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCTCTGGGCACCTCA	56666575	True	NA	18	True	AATAAA	-14	NA	56682469	56684196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_56682569_56683164_56683231_56683957
transcript_75603.known	chr16	+	549	3	FSM	ENSG00000187193.9	ENST00000564974.1	549	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	1445	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCTCTGGGCACCTCA	56666586	True	NA	18	True	AATAAA	-14	NA	56682480	56684196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_56682569_56683164_56683387_56683957
transcript_7561.known	chr1	+	2648	18	FSM	ENSG00000171793.16	ENST00000648914.1	2648	18	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_13	97.6320328623268	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCATAGCTACGTGGCAC	40972578	True	NA	NA	False	NA	NA	NA	40979704	41012479	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40979830_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41008658_41008715_41008793_41008891_41009444_41009590_41010160_41010255_41011657
transcript_75612.known	chr16	+	8234	22	FSM	ENSG00000102900.13	ENST00000308159.10	8234	22	0	0	0	0	multi-exon	FALSE	canonical	3	1245	junction_7	106.69310896742	1185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGAGTGCCATGTGCCC	56716757	True	NA	NA	False	AGTAAA	-15	NA	56730128	56850286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_56730212_56748233_56748427_56758537_56758656_56798475_56798539_56805503_56805633_56818663_56818739_56821503_56821594_56823706_56823847_56828976_56829110_56830527_56830686_56831841_56832008_56832294_56832389_56833214_56833407_56834127_56834255_56834369_56834443_56834733_56834779_56836600_56836718_56837607_56837727_56838951_56839070_56839520_56839605_56841704_56841834_56844498
transcript_75665.known	chr16	+	1862	8	FSM	ENSG00000051108.15	ENST00000300302.9	1862	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	89.3683046585926	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGACTCCTGTCATCCT	56929756	True	NA	22	True	AATAAA	-22	NA	56932146	56943881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_56932392_56935234_56935313_56935403_56935476_56936686_56936818_56939236_56939360_56939894_56940246_56942131_56942238_56943125
transcript_75669.known	chr16	+	1782	7	FSM	ENSG00000051108.15	ENST00000379792.6	1782	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	105.454044756735	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCCTGTCATCCTAGCAG	56929769	True	NA	27	True	AATAAA	-27	NA	56932159	56943886	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_56932392_56935234_56935313_56936686_56936818_56939236_56939360_56939894_56940246_56942131_56942238_56943125
transcript_75673.known	chr16	+	1388	6	FSM	ENSG00000051108.15	ENST00000344114.8	1388	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	122.384639559056	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGACTCCTGTCATCCT	56929756	True	NA	22	True	AATAAA	-22	NA	56932146	56943881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_56932392_56935234_56935313_56935403_56935476_56936686_56936818_56942131_56942238_56943125
transcript_75680.known	chr16	+	2601	16	FSM	ENSG00000140848.17	ENST00000290776.13	2601	16	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	12.5496347888428	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGGCCCATACCAGTT	57091574	True	NA	NA	False	AATAAA	-24	NA	57092582	57148369	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_57092791_57110707_57110923_57113287_57113468_57115475_57115551_57117495_57117568_57119194_57119279_57119560_57119651_57121092_57121192_57121673_57121761_57123413_57123474_57125859_57125994_57127848_57127904_57134774_57134827_57137148_57137283_57146084_57146322_57147550
transcript_75681.nic	chr16	+	2141	16	NIC	ENSG00000140848.17	novel	1976	15	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	27.4862389812308	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGCTTTTTCCAAGTAA	57105961	True	NA	14	True	AATAAA	-15	NA	57106021	57147964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_57106175_57110707_57110923_57113287_57113468_57115475_57115551_57117495_57117568_57119194_57119279_57119560_57119651_57121092_57121192_57121673_57121761_57123413_57123474_57125859_57125994_57127848_57127904_57134774_57134827_57137148_57137283_57146084_57146322_57147550
transcript_75706.known	chr16	-	1055	8	FSM	ENSG00000172775.17	ENST00000564108.5	1055	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	391.047990165203	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACACAGGGAGCTCCTCCC	-57178230	True	NA	NA	False	NA	NA	NA	57186032	57154278	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_57154508_57164000_57164066_57167092_57167227_57172250_57172373_57172775_57172875_57173727_57173870_57175538_57175591_57185820
transcript_7572.known	chr1	+	2019	17	FSM	ENSG00000171793.16	ENST00000480420.6	2019	17	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_13	100.613120416773	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTATTTTATTATGCGGA	40972561	True	NA	NA	False	TTTAAA	-15	NA	40979687	41011754	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_40979830_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41008658_41008891_41009444_41009590_41010160_41010255_41011657
transcript_75726.known	chr16	-	1086	7	FSM	ENSG00000172775.17	ENST00000567439.5	1086	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	378.062458096836	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGCCTGCATCCTGTGT	-57178238	True	NA	-82	True	NA	NA	NA	57186040	57154199	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_57154508_57164000_57164066_57167092_57167227_57172250_57172373_57172775_57172875_57173727_57173870_57185824
transcript_75727.nic	chr16	-	2781	7	NIC	ENSG00000172775.17	novel	2823	7	NA	NA	-91	0	intron_retention	FALSE	canonical	0	0	junction_3	353.177677978411	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTTTCCTCTACTGA	NA	False	NA	NA	False	AATAAA	-18	NA	57186207	57152465	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_57154508_57164000_57164066_57167092_57167227_57172250_57172373_57172775_57172875_57173727_57173870_57186030
transcript_75730.nic	chr16	-	1620	7	NIC	ENSG00000172775.17	novel	2823	7	NA	NA	3	203	intron_retention	FALSE	canonical	0	0	junction_3	353.177677978411	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAGAGAAACAAACGTAG	-57186096	False	53	41	True	AATAAA	-23	NA	57186113	57153532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_57154508_57164000_57164066_57167092_57167227_57172250_57172373_57172775_57172875_57173727_57173870_57186030
transcript_75741.nic	chr16	-	1112	7	NIC	ENSG00000172775.17	novel	2823	7	NA	NA	-91	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	353.177677978411	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACCTGTGGCCCGAATCG	NA	False	NA	-17	True	NA	NA	NA	57186207	57154134	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_57154508_57164000_57164066_57167092_57167227_57172250_57172373_57172775_57172875_57173727_57173870_57186030
transcript_75753.nic	chr16	+	2487	15	NIC	ENSG00000159579.14	novel	3586	15	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	49.3738342667863	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCTCTAATCAGTTGTA	NA	False	NA	NA	False	AAAAAG	-8	NA	57186255	57239046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_57186786_57204503_57205009_57208057_57208111_57209074_57209188_57212971_57213099_57213887_57213947_57216106_57216174_57216903_57217036_57220731_57220848_57221271_57221416_57227341_57227454_57230710_57230814_57231166_57231320_57235123_57235229_57238878
transcript_75754.nic	chr16	+	3910	15	NIC	ENSG00000159579.14	novel	3503	15	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	49.3738342667863	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGATTTCACAACTTTCA	NA	False	NA	36	True	AATAAA	-21	NA	57186255	57240469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_57186786_57204503_57205009_57208057_57208111_57209074_57209188_57212971_57213099_57213887_57213947_57216106_57216174_57216903_57217036_57220731_57220848_57221271_57221416_57227341_57227454_57230710_57230814_57231166_57231320_57235123_57235229_57238878
transcript_75756.known	chr16	+	3503	15	FSM	ENSG00000159579.14	ENST00000394420.9	3503	15	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	44.3020707121886	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGATTTCACAACTTTCA	57182767	True	NA	36	True	AATAAA	-21	NA	57186328	57240469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_57186452_57204503_57205009_57208057_57208111_57209074_57209188_57212971_57213099_57213887_57213947_57216106_57216174_57216903_57217036_57220731_57220848_57221271_57221416_57227341_57227454_57230710_57230814_57231166_57231320_57235123_57235229_57238878
transcript_75760.known	chr16	+	3586	15	FSM	ENSG00000159579.14	ENST00000537866.5	3586	15	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	59.2219967407312	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATCATGAATTATTGACTA	57182771	True	NA	5	True	AATAAA	-20	NA	57186332	57239957	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_57187051_57204503_57205009_57208057_57208111_57209074_57209188_57212971_57213099_57213887_57213947_57216106_57216174_57216903_57217036_57220731_57220848_57221271_57221416_57227341_57227454_57230710_57230814_57231166_57231320_57235123_57235229_57238878
transcript_75762.nic	chr16	+	2093	15	NIC	ENSG00000159579.14	novel	3503	15	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	65.033154809603	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCTCTAATCAGTTGTA	57182732	True	NA	NA	False	AAAAAG	-8	NA	57186293	57239046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_57186430_57204503_57205009_57208057_57208111_57209074_57209188_57212971_57213099_57213887_57213947_57216106_57216174_57216903_57217036_57220731_57220848_57221271_57221416_57227341_57227454_57230710_57230814_57231166_57231320_57235123_57235229_57238878
transcript_75771.known	chr16	+	1969	6	FSM	ENSG00000102931.8	ENST00000219204.8	1969	6	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_5	12.0233106921513	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTGTATTCTTTCTTTA	57243959	True	NA	49	True	AGTAAA	-35	NA	57245258	57253635	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_57245406_57246079_57246142_57248536_57248644_57249766_57249853_57250410_57250508_57252165
transcript_75773.known	chr16	-	1497	4	FSM	ENSG00000102934.10	ENST00000219207.10	1497	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	3.29983164553722	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGACAAGATGTTGGCAA	-57284344	True	NA	-10	True	AATAAA	-21	NA	57284672	57256096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_57257030_57258461_57258585_57261896_57262071_57284405
transcript_75774.known	chr16	+	3285	3	FSM	ENSG00000006210.7	ENST00000006053.7	3285	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATATGGGTGATTTCTCT	57372435	True	NA	8	True	AATAAA	-19	NA	57372489	57385044	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_57372639_57379633_57379755_57382029
transcript_75776.known	chr16	-	2016	9	FSM	ENSG00000005194.15	ENST00000567518.5	2016	9	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_7	317.792286722003	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCCTTGAAACTTGATT	-57438364	True	NA	-18	True	AATAAA	-15	NA	57447419	57428186	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_57429281_57430257_57430340_57431150_57431267_57432486_57432561_57434043_57434213_57436655_57436733_57439181_57439296_57440771_57440984_57447341
transcript_75778.known	chr16	-	2021	9	FSM	ENSG00000005194.15	ENST00000394391.9	2021	9	0	0	0	0	multi-exon	FALSE	canonical	3	962	junction_8	99.8620924074796	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCCTTGAAACTTGATT	-57438330	True	NA	-18	True	AATAAA	-15	NA	57447385	57428186	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_57429281_57430257_57430340_57431150_57431267_57432486_57432561_57434043_57434213_57436655_57436733_57439181_57439335_57440771_57440984_57447341
transcript_75795.known	chr16	-	1137	8	FSM	ENSG00000005194.15	ENST00000568940.5	1137	8	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	373.000957486324	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCTCATGTTAAGAGAAG	-57438313	True	NA	NA	False	NA	NA	NA	57447368	57428937	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_57429281_57430257_57430340_57432486_57432561_57434043_57434213_57436655_57436733_57439181_57439335_57440771_57440984_57447341
transcript_75817.known	chr16	+	1630	9	FSM	ENSG00000088682.14	ENST00000262507.11	1630	9	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_5	31.5730799099486	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCATTGTGTAGTTAGTTT	57443509	True	NA	10	True	AATAAA	-17	NA	57447478	57461270	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_57447579_57451039_57451209_57452800_57452937_57456503_57456647_57456930_57457016_57458245_57458351_57459564_57459721_57460050_57460105_57460588
transcript_75823.known	chr16	-	2767	9	FSM	ENSG00000125170.11	ENST00000340099.9	2767	9	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_8	40.9906620463734	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTTCTGTTAATCAATAA	-57485293	True	NA	-3	True	AATAAA	-15	NA	57486493	57471960	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_57473496_57473612_57473737_57473900_57474040_57474792_57474983_57475099_57475220_57475505_57475621_57475849_57475958_57479441_57479689_57486304
transcript_75837.nic	chr16	-	2923	8	NIC	ENSG00000125170.11	novel	2767	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	62	junction_7	43.761878853819	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGATCTCTGGTTTTCTCC	-57485293	True	NA	-4	True	AATAAA	-19	NA	57486493	57471921	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_57473737_57473900_57474040_57474792_57474983_57475099_57475220_57475505_57475621_57475849_57475958_57479441_57479689_57486304
transcript_75839.known	chr16	-	1848	8	FSM	ENSG00000125170.11	ENST00000569548.5	1848	8	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	15.3010603874239	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGAACAGCAGGTGGCTTC	-57479864	False	NA	NA	False	NA	NA	NA	57479874	57472876	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_57473496_57473612_57473737_57473900_57474040_57474792_57474983_57475099_57475220_57475505_57475621_57475849_57475958_57479441
transcript_75844.known	chr16	-	2851	7	FSM	ENSG00000125170.11	ENST00000566936.5	2851	7	0	0	0	0	multi-exon	TRUE	canonical	3	160	junction_3	13.9373598647664	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGATCTCTGGTTTTCTCC	-57479795	False	1200	-4	True	AATAAA	-19	NA	57479805	57471921	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_57473737_57473900_57474040_57474792_57474983_57475099_57475220_57475505_57475621_57475849_57475958_57479441
transcript_75849.known	chr16	+	882	6	FSM	ENSG00000088682.14	ENST00000567933.5	882	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	103.584940990474	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGATTGAAAAATGAGATG	57443527	True	NA	NA	False	NA	NA	NA	57447496	57460873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_57447579_57451039_57451209_57452800_57452937_57459564_57459721_57460050_57460105_57460588
transcript_75852.known	chr16	+	1027	5	FSM	ENSG00000088682.14	ENST00000568790.5	1027	5	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_4	37.9901302972233	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTCAATGTGATGCTTG	57443512	True	NA	NA	False	NA	NA	NA	57447481	57457412	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_57447579_57451039_57451209_57452800_57452937_57456503_57456647_57456930
transcript_75853.known	chr16	+	1482	8	FSM	ENSG00000088682.14	ENST00000567072.5	1482	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	94.542291584027	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAATAAATATGTTTG	57443524	True	NA	-18	True	NA	NA	NA	57447493	57461242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_57447579_57451039_57451209_57452800_57452937_57456503_57456627_57458245_57458351_57459564_57459721_57460050_57460105_57460588
transcript_75854.known	chr16	+	1764	9	FSM	ENSG00000102978.13	ENST00000219252.10	1764	9	0	0	0	0	multi-exon	FALSE	canonical	3	522	junction_7	41.0571248384492	427	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATGCGTCATCGTGCCA	57454103	True	NA	27	True	AATAAA	-18	NA	57462678	57472009	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_57462811_57463028_57463079_57465952_57466022_57466174_57466228_57469164_57469294_57469709_57469762_57469960_57470130_57470279_57470355_57470974
transcript_75855.known	chr16	-	2432	9	FSM	ENSG00000135736.6	ENST00000258214.3	2432	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_8	6.49879796577798	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAAGAATGAATGAATG	-57536368	True	NA	NA	False	AATAAA	-15	NA	57536571	57512180	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_57512871_57515340_57515445_57516292_57516464_57518067_57518278_57518624_57518742_57521067_57521177_57525900_57526128_57528592_57529325_57536499
transcript_75858.nnic	chr16	-	2441	9	NNC	ENSG00000135736.6	novel	2432	9	NA	NA	-592	83	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	13.067134345372	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGGGGCATCTGAAAGTA	NA	False	NA	-14	True	AATAAA	-13	NA	57537163	57512303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_57512871_57515340_57515445_57516292_57516464_57518067_57518278_57518624_57518742_57521067_57521177_57525900_57526128_57528592_57529325_57536959
transcript_75864.nnic	chr16	+	4105	12	NNC	ENSG00000159618.16	novel	504	3	NA	NA	-14052	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_11	9.54675315841824	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTACTGGTATTATCATT	57528084	True	NA	20	True	AATAAA	-32	NA	57528590	57577189	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_57529420_57562055_57562158_57562383_57562460_57563090_57563248_57563847_57563980_57565033_57565151_57566598_57566752_57567469_57567592_57567855_57568125_57570417_57570536_57574814_57575093_57575437
transcript_75865.nnic	chr16	+	3987	11	NNC	ENSG00000159618.16	novel	504	3	NA	NA	-14052	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_9	18.3163861064349	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTACTGGTATTATCATT	57528084	True	NA	20	True	AATAAA	-32	NA	57528590	57577189	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_57529420_57562055_57562158_57562383_57562460_57563090_57563248_57563847_57563980_57565033_57565151_57566598_57566752_57567469_57567592_57567855_57568125_57574814_57575093_57575437
transcript_75869.known	chr16	+	3741	15	FSM	ENSG00000205336.14	ENST00000567835.5	3741	15	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	2.60298102261266	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCGTAAGCATTTTGGGT	57620009	False	NA	NA	False	AATAAA	-28	NA	57620076	57665028	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_57620137_57641590_57641709_57650252_57650352_57651199_57651623_57653202_57653336_57653985_57654134_57655398_57655531_57655875_57655993_57656225_57656272_57656513_57656618_57657372_57657492_57659394_57659682_57660767_57660877_57661696_57661966_57663451
transcript_7589.nic	chr1	-	3626	18	NIC	ENSG00000010803.16	novel	3323	16	NA	NA	-56	0	intron_retention	FALSE	canonical	3	25	junction_13	18.336342418465	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGTCTTTTTAATCAGT	-41241652	True	NA	-28	True	AATAAA	-15	NA	41242210	41027201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_41028320_41028583_41028727_41033982_41034049_41037361_41037542_41046406_41046599_41048689_41048891_41070594_41070722_41075218_41075452_41113282_41113527_41116921_41117011_41142877_41143113_41151613_41151685_41152598_41152742_41159724_41159934_41160874_41160899_41161363_41161433_41186120_41186251_41242058
transcript_75890.nic	chr16	+	2733	20	NIC	ENSG00000140854.13	novel	2618	20	NA	NA	-33	0	intron_retention	FALSE	canonical	0	0	junction_16	87.8536304759891	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGTTTCCTTGTGGGGA	NA	False	NA	11	True	ATTAAA	-13	NA	57735705	57757244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_57735856_57736977_57737284_57741686_57741818_57744393_57744512_57750826_57750928_57751260_57751303_57751640_57751725_57751939_57752056_57752529_57752602_57752777_57752929_57753076_57753268_57753388_57753520_57753944_57753996_57754929_57754998_57755118_57755239_57755344_57755495_57755789_57755918_57755991_57756067_57756355_57756473_57756813
transcript_75892.known	chr16	+	2618	20	FSM	ENSG00000140854.13	ENST00000379661.8	2618	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	87.8536304759891	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGTTTCCTTGTGGGGA	57730988	True	NA	11	True	ATTAAA	-13	NA	57735769	57757244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_57735856_57736977_57737284_57741686_57741818_57744393_57744512_57750826_57750928_57751260_57751303_57751640_57751725_57751939_57752056_57752529_57752602_57752777_57752929_57753076_57753268_57753388_57753520_57753944_57753996_57754929_57754998_57755118_57755239_57755344_57755495_57755840_57755918_57755991_57756067_57756355_57756473_57756813
transcript_75902.nic	chr16	+	2824	20	NIC	ENSG00000140854.13	novel	2618	20	NA	NA	34	0	intron_retention	FALSE	canonical	0	0	junction_16	100.763071985228	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGTTTCCTTGTGGGGA	57731043	True	NA	11	True	ATTAAA	-13	NA	57735824	57757244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_57736117_57736977_57737284_57741686_57741818_57744393_57744512_57750826_57750928_57751260_57751303_57751640_57751725_57751939_57752056_57752529_57752602_57752777_57752929_57753076_57753268_57753388_57753520_57753944_57753996_57754929_57754998_57755118_57755239_57755344_57755495_57755840_57755918_57755991_57756067_57756355_57756473_57756813
transcript_75956.known	chr16	-	3359	20	FSM	ENSG00000140859.16	ENST00000445690.7	3359	20	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	13.9587838091061	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGGTCTGAAAAAGTTGG	-57802136	True	NA	-18	True	AATAAA	-19	NA	57802491	57758216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_57758910_57759124_57759154_57759727_57759837_57760281_57760417_57760725_57760956_57761041_57761172_57761412_57761537_57762139_57762271_57764142_57764248_57765458_57765641_57766873_57766986_57769594_57769726_57769807_57769956_57770526_57770701_57771197_57771438_57771542_57771687_57772222_57772289_57794998_57795142_57798071_57798283_57802369
transcript_75957.known	chr16	-	3047	20	FSM	ENSG00000140859.16	ENST00000541240.5	3047	20	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	15.8126146213533	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGGTTCCCGCAGCTGGG	-57803005	False	NA	NA	False	NA	NA	NA	57803023	57758444	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_57758910_57759124_57759154_57759727_57759837_57760281_57760417_57760725_57760956_57761041_57761172_57761412_57761537_57762139_57762271_57764142_57764248_57765458_57765641_57766873_57766986_57769594_57769726_57769807_57769956_57770526_57770701_57771197_57771438_57771542_57771687_57772222_57772289_57794998_57795142_57798071_57798283_57802985
transcript_75961.known	chr16	-	3427	19	FSM	ENSG00000140859.16	ENST00000379655.8	3427	19	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_13	7.16322053234868	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGGTCTGAAAAAGTTGG	-57802570	False	NA	-18	True	AATAAA	-19	NA	57802588	57758216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_57758910_57759727_57759837_57760281_57760417_57760725_57760956_57761041_57761172_57761412_57761537_57762139_57762271_57764142_57764248_57765458_57765641_57766873_57766986_57769594_57769726_57769807_57769956_57770526_57770701_57771197_57771438_57771542_57771687_57772222_57772289_57794998_57795142_57798071_57798283_57802369
transcript_75966.nic	chr16	-	3186	18	NIC	ENSG00000140859.16	novel	3427	19	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_16	11.7499907973166	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGGTCTGAAAAAGTTGG	-57802135	True	NA	-18	True	AATAAA	-19	NA	57802490	57758216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_57758910_57759727_57759837_57760281_57760417_57760725_57760956_57761041_57761172_57761412_57761537_57762139_57762271_57764142_57764248_57765458_57765641_57766873_57766986_57769594_57769726_57769807_57769956_57770526_57770701_57771197_57771438_57771542_57771687_57772222_57772289_57798071_57798283_57802369
transcript_75972.known	chr16	+	2248	7	FSM	ENSG00000103005.12	ENST00000219281.8	2248	7	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_2	22.5511763674438	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTTGGACTACTTGTA	57993428	True	NA	24	True	AATAAA	-22	NA	58001406	58021618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_58001582_58002478_58002646_58009928_58010113_58014272_58014327_58017333_58017440_58018971_58019056_58020140
transcript_75974.known	chr16	+	1212	6	FSM	ENSG00000103005.12	ENST00000539737.6	1212	6	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_3	182.564618697052	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCTCTCTCTTCCTCTCC	57993426	True	NA	NA	False	NA	NA	NA	58001404	58020634	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_58001582_58002478_58002646_58009928_58010113_58017333_58017440_58018971_58019056_58020140
transcript_75976.known	chr16	+	1217	4	FSM	ENSG00000103005.12	ENST00000423271.7	1217	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	213.729319987273	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTCATTTCACTCACCCT	57993428	True	NA	NA	False	NA	NA	NA	58001406	58011708	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_58001582_58002478_58002646_58009928_58010113_58011017
transcript_75978.known	chr16	+	1751	4	FSM	ENSG00000103005.12	ENST00000563149.1	1751	4	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_3	213.729319987273	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACCTAGCTGAGCCTGAC	57993441	True	NA	7	True	AATAAA	-27	NA	58001419	58013558	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_58001582_58002478_58002646_58009928_58010113_58012320
transcript_75980.known	chr16	-	517	2	FSM	ENSG00000166188.3	ENST00000562909.1	517	2	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCAGGAGAGCCAGGCCC	-58000435	False	NA	NA	False	NA	NA	NA	58000453	57998058	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_57998523_58000400
transcript_75981.known	chr16	-	5027	2	FSM	ENSG00000166188.3	ENST00000299237.3	5027	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGCACTGCTTGTTCTG	-58000235	True	NA	-7	True	AGTAAA	-19	NA	58000672	57994675	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_57998523_57999492
transcript_75982.known	chr16	+	2895	1	FSM	ENSG00000103005.12	ENST00000624720.1	2895	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTACCTAGCTGAGCCTGA	58010638	False	NA	6	True	AATAAA	-26	NA	58010662	58013557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_58010700_58013600
transcript_75989.nnic	chr16	+	4222	11	NNC	ENSG00000102996.5	novel	4062	10	NA	NA	-219	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	71.3579708231673	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCCTTGTTTGTAAGGC	58025524	False	NA	16	True	AATAAA	-17	NA	58025534	58046901	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_58026513_58037471_58037621_58038265_58038395_58039874_58040183_58040536_58040699_58041616_58041871_58042230_58042370_58043209_58043361_58043511_58043628_58045006_58046109_58046167
transcript_75996.known	chr16	+	4062	10	FSM	ENSG00000102996.5	ENST00000219271.4	4062	10	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	30.4087381853422	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCCTTGTTTGTAAGGC	58023500	True	NA	16	True	AATAAA	-17	NA	58025753	58046901	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_58026513_58037471_58037621_58038265_58038395_58039874_58040183_58040536_58040699_58041616_58041871_58042230_58042370_58043209_58043361_58043511_58043628_58045006
transcript_76004.nic	chr16	+	2428	9	ISM	ENSG00000102996.5	ENST00000219271.4	4062	10	-35	3048	-35	2986	5prime_fragment	FALSE	canonical	3	176	junction_1	26.6505159424729	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAGTGCCCCAAATTCCA	58023465	True	NA	NA	False	AATAAA	-14	NA	58025718	58043853	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_58026513_58037471_58037621_58038265_58038395_58039874_58040183_58040536_58040699_58041616_58041871_58042230_58042370_58043209_58043361_58043511
transcript_7601.nic	chr1	-	3495	17	NIC	ENSG00000010803.16	novel	3323	16	NA	NA	9	0	intron_retention	FALSE	canonical	3	25	junction_12	20.5060966544099	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGTCTTTTTAATCAGT	-41241587	True	NA	-28	True	AATAAA	-15	NA	41242145	41027201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_41028320_41028583_41028727_41037361_41037542_41046406_41046599_41048689_41048891_41070594_41070722_41075218_41075452_41113282_41113527_41116921_41117011_41142877_41143113_41151613_41151685_41152598_41152742_41159724_41159934_41160874_41160899_41161363_41161433_41186120_41186251_41242058
transcript_76010.known	chr16	-	1281	6	FSM	ENSG00000070761.8	ENST00000262498.8	1281	6	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_1	23.7116005364463	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTCCTAGTTTGTCTTT	-58123309	True	NA	0	True	AATAAA	-24	NA	58129381	58113591	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_58114031_58114809_58114921_58115268_58115458_58116040_58116153_58116871_58116952_58129031
transcript_76016.known	chr16	+	5272	9	FSM	ENSG00000103021.10	ENST00000219299.8	5272	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_7	16.293691263799	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTGTATATATGTATTT	58248930	True	NA	NA	False	AATAAA	-18	NA	58249935	58283836	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_58250116_58252726_58252854_58253997_58254160_58258367_58258524_58259853_58259935_58262384_58262541_58267478_58267587_58278481_58278638_58279690
transcript_76022.known	chr16	+	891	8	NNC	ENSG00000103021.10	novel	5272	9	NA	NA	-11	5009	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	25.9662261015956	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAAAAAATTGAAAAAGAAA	58248971	True	NA	NA	False	AATATA	-43	NA	58249976	58267549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_58250116_58252726_58252854_58253997_58254160_58258367_58258524_58259853_58259869_58259869_58259935_58262384_58262541_58267478
transcript_76024.known	chr16	+	1728	4	FSM	ENSG00000181938.14	ENST00000426538.6	1728	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAAAGCTGTCAGGGAGT	58391140	True	NA	NA	False	NA	NA	NA	58392393	58405481	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_58392788_58395101_58395219_58403097_58403332_58404498
transcript_76025.known	chr16	+	2200	3	FSM	ENSG00000181938.14	ENST00000318129.6	2200	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	21.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTTGCTTGTGTGGTA	58391217	True	NA	18	True	AATACA	-22	NA	58392470	58406147	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_58392788_58403097_58403332_58404498
transcript_76027.known	chr16	+	1932	2	FSM	ENSG00000181938.14	ENST00000328514.11	1932	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGTTCTGTACAAGTGC	58391140	True	NA	18	True	AATAAA	-19	NA	58392393	58406036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_58392788_58404498
transcript_76029.known	chr16	-	655	1	FSM	ENSG00000276131.1	ENST00000613275.1	655	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTAAGTCCGACCCTTTC	-58392637	True	NA	-11	True	AATAAA	-24	NA	58392807	58392152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_58392200_58392800
transcript_76031.known	chr16	+	3324	16	FSM	ENSG00000103034.15	ENST00000258187.9	3324	16	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	19.0314359824884	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCTCATTTCTCCCCTG	58463612	True	NA	13	True	ATTAAA	-25	NA	58463664	58513628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_58463798_58487755_58487851_58494963_58495009_58503797_58503904_58504153_58504275_58504358_58504422_58504588_58504650_58506386_58506474_58506557_58506615_58506911_58507016_58507807_58507865_58507947_58508000_58508961_58509010_58509153_58509190_58509300_58509353_58511421
transcript_76033.known	chr16	+	3626	16	FSM	ENSG00000103034.15	ENST00000394282.8	3626	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	19.8355460950509	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCTTATGTGCTCATT	58463971	False	NA	4	True	ATTAAA	-16	NA	58464023	58513619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_58464468_58487755_58487851_58494963_58495009_58503797_58503904_58504153_58504275_58504358_58504422_58504588_58504650_58506386_58506474_58506557_58506615_58506911_58507016_58507807_58507865_58507947_58508000_58508961_58509010_58509153_58509190_58509300_58509353_58511421
transcript_76038.known	chr16	+	1375	15	FSM	ENSG00000103034.15	ENST00000356752.8	1375	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	18.660363974839	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGTGTTTTAAGGGGCTC	58499705	True	NA	NA	False	NA	NA	NA	58500142	58511735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_58500270_58500987_58501078_58503797_58503904_58504153_58504275_58504358_58504422_58504588_58504650_58506386_58506474_58506557_58506615_58506911_58507016_58507807_58507865_58507947_58508000_58508961_58509010_58509153_58509190_58509300_58509353_58511421
transcript_7604.nic	chr1	-	3274	16	NIC	ENSG00000010803.16	novel	3323	16	NA	NA	-56	0	intron_retention	FALSE	canonical	2	9	junction_12	19.3245957266899	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGTCTTTTTAATCAGT	-41241652	True	NA	-28	True	AATAAA	-15	NA	41242210	41027201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_41028320_41028583_41028727_41033982_41034049_41037361_41037542_41046406_41046599_41048689_41048891_41070594_41070722_41075218_41075452_41113282_41113527_41116921_41117011_41142877_41143113_41151613_41151685_41160874_41160899_41161363_41161433_41186120_41186251_41242058
transcript_76043.known	chr16	+	3265	14	FSM	ENSG00000103034.15	ENST00000566192.5	3265	14	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	12.0231532061166	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCTTATGTGCTCATT	NA	False	NA	4	True	ATTAAA	-16	NA	58500046	58513619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_58500270_58503797_58503904_58504153_58504275_58504358_58504422_58504588_58504650_58506386_58506474_58506557_58506615_58506911_58507016_58507807_58507865_58507947_58508000_58508961_58509010_58509153_58509190_58509300_58509353_58511421
transcript_7605.nic	chr1	-	3327	16	NIC	ENSG00000010803.16	novel	3323	16	NA	NA	-9	0	intron_retention	FALSE	canonical	1	10	junction_11	18.3477519058875	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGTCTTTTTAATCAGT	-41241567	True	NA	-28	True	AATAAA	-15	NA	41242125	41027201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_41028320_41028583_41028727_41033982_41034049_41037361_41037542_41046406_41046599_41048689_41048891_41070594_41070722_41075218_41075452_41113282_41113527_41116921_41117011_41142877_41143113_41159724_41159934_41160874_41160899_41161363_41161433_41186120_41186251_41242058
transcript_76050.nic	chr16	+	3225	14	NIC	ENSG00000103034.15	novel	583	8	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	14.8972814326252	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGCTTATGTGCTCAT	58501387	True	NA	3	True	ATTAAA	-15	NA	58501494	58513618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_58501679_58503797_58503904_58504153_58504275_58504358_58504422_58504588_58504650_58506386_58506474_58506557_58506615_58506911_58507016_58507807_58507865_58507947_58508000_58508961_58509010_58509153_58509190_58509300_58509353_58511421
transcript_76064.known	chr16	-	7660	49	FSM	ENSG00000125107.19	ENST00000569240.5	7660	49	0	0	0	0	multi-exon	TRUE	canonical	3	203	junction_30	167.555504899786	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTCTGGAACTTCTTG	-58612841	True	NA	-17	True	AATACA	-13	NA	58629834	58520694	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_58521037_58521182_58521318_58523369_58523503_58525178_58525360_58525988_58526139_58528474_58528649_58530245_58530348_58531957_58532076_58532231_58532396_58534146_58534396_58536988_58537221_58537890_58538061_58538157_58538267_58538771_58538915_58539767_58539960_58541500_58541621_58542230_58542336_58542427_58542569_58543606_58543904_58545360_58545492_58546320_58546499_58546671_58546750_58547185_58547297_58547565_58547683_58549718_58549899_58551131_58551273_58551588_58551820_58553781_58553861_58555250_58555538_58555783_58555909_58556861_58556994_58558472_58558675_58560211_58560363_58574608_58574761_58575006_58575130_58576462_58576583_58578698_58578940_58580632_58580761_58581344_58581516_58582792_58582904_58583055_58583183_58585337_58585507_58586544_58586749_58587200_58587256_58587344_58587414_58587779_58587879_58588798_58588907_58599235_58599512_58629727
transcript_76072.known	chr16	-	4999	31	FSM	ENSG00000125107.19	ENST00000441024.6	4999	31	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_12	74.7638430140012	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATATCTGACAATCTCA	-58612845	True	NA	NA	False	AATAAA	-20	NA	58629838	58543326	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_58543904_58545360_58545492_58546320_58546499_58546671_58546750_58547185_58547297_58547565_58547683_58549718_58549899_58551131_58551273_58551588_58551820_58553781_58553861_58555250_58555538_58555783_58555909_58556846_58556994_58558472_58558675_58560211_58560363_58574608_58574761_58575006_58575130_58576462_58576583_58578698_58578940_58580632_58580761_58581344_58581516_58582792_58582904_58583055_58583183_58585337_58585507_58586544_58586749_58587200_58587256_58587344_58587414_58587779_58587879_58588798_58588907_58599235_58599512_58629727
transcript_7608.known	chr1	-	3323	16	FSM	ENSG00000010803.16	ENST00000372596.5	3323	16	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_11	20.4439613469493	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGTCTTTTTAATCAGT	-41241558	True	NA	-28	True	AATAAA	-15	NA	41242116	41027201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_41028320_41028583_41028727_41037361_41037542_41046406_41046599_41048689_41048891_41070594_41070722_41075218_41075452_41113282_41113527_41116921_41117011_41142877_41143113_41151613_41151685_41159724_41159934_41160874_41160899_41161363_41161433_41186120_41186251_41242058
transcript_76082.known	chr16	-	599	2	FSM	ENSG00000125107.19	ENST00000569916.1	599	2	0	0	0	0	multi-exon	FALSE	canonical	3	688	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGATCTCGGCTCACTGC	-58612831	True	NA	NA	False	NA	NA	NA	58629824	58599009	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_58599512_58629727
transcript_76084.known	chr16	+	1909	9	FSM	ENSG00000103037.12	ENST00000427443.5	1909	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	44.1219899823206	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAAGGAGGACTTCAATTA	58513020	True	NA	2	True	AATAAA	-14	NA	58515495	58519515	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_58515565_58515790_58515881_58515952_58516098_58516201_58516344_58516477_58516673_58516807_58516929_58518019_58518232_58518400_58518544_58518723
transcript_76085.known	chr16	+	2042	9	FSM	ENSG00000103037.12	ENST00000310682.6	2042	9	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	29.7814959328775	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTGGGGGAAAAGGATAT	58513003	True	NA	NA	False	TTTAAA	-39	NA	58515478	58519662	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_58515565_58515790_58515881_58515952_58516098_58516201_58516344_58516477_58516673_58516807_58516929_58518050_58518232_58518400_58518544_58518723
transcript_76095.known	chr16	+	6256	8	FSM	ENSG00000103037.12	ENST00000219315.9	6256	8	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_5	27.1263107460981	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCTTCTGTGTTCAAC	58513041	True	NA	7	True	AATAAA	-18	NA	58515516	58523842	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_58515565_58515790_58516098_58516201_58516344_58516477_58516673_58516807_58516929_58518050_58518232_58518400_58518544_58518723
transcript_761.known	chr1	-	1072	3	FSM	ENSG00000175756.14	ENST00000338370.7	1072	3	0	0	0	0	multi-exon	FALSE	canonical	3	4380	junction_2	93	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCGGGTCTGGAGCTCCA	-1344457	True	NA	-23	True	AATAAA	-22	NA	1375157	1373729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1373903_1373999_1374446_1374704
transcript_7613.nic	chr1	-	3159	15	NIC	ENSG00000010803.16	novel	3252	15	NA	NA	-12	0	intron_retention	FALSE	canonical	2	22	junction_11	15.828158839388	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGTCTTTTTAATCAGT	-41241608	True	NA	-28	True	AATAAA	-15	NA	41242166	41027201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_41028320_41028583_41028727_41033982_41034049_41037361_41037542_41046406_41046599_41048689_41048891_41070594_41070722_41075218_41075452_41113282_41113527_41116921_41117011_41142877_41143113_41160874_41160899_41161363_41161433_41186120_41186251_41242058
transcript_76136.known	chr16	-	4058	12	FSM	ENSG00000103042.9	ENST00000219320.9	4058	12	0	0	0	0	multi-exon	TRUE	canonical	3	83	junction_11	22.5875706331477	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTCCCCTGTGTCTGA	-58683014	True	NA	0	True	AATAAA	-19	NA	58684770	58665108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_58667488_58670112_58670168_58671044_58671245_58672095_58672244_58675939_58676055_58676288_58676347_58677325_58677425_58678332_58678475_58678695_58678895_58679856_58680242_58683954_58684179_58684716
transcript_76155.known	chr16	-	1921	9	FSM	ENSG00000103042.9	ENST00000562149.5	1921	9	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_8	23.7588799188851	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAACAAAAGAATCTCTA	-58682987	True	NA	NA	False	NA	NA	NA	58684743	58671571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_58672244_58675939_58676055_58676288_58676347_58677325_58677425_58678332_58678475_58678695_58678895_58679856_58680242_58683954_58684179_58684716
transcript_7616.known	chr1	-	3108	15	FSM	ENSG00000010803.16	ENST00000337495.9	3108	15	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_11	21.8754591788542	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGTCTTTTTAATCAGT	-41241552	True	NA	-28	True	AATAAA	-15	NA	41242110	41027201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_41028320_41028583_41028727_41037361_41037542_41046406_41046599_41048689_41048891_41070594_41070722_41075218_41075452_41113282_41113527_41116921_41117011_41142877_41143113_41151613_41151685_41160874_41160899_41161363_41161433_41186120_41186251_41242058
transcript_76164.known	chr16	-	2421	10	FSM	ENSG00000125166.13	ENST00000245206.10	2421	10	0	0	0	0	multi-exon	FALSE	canonical	3	1205	junction_5	56.9151415120206	2063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTCTACTAAGTTATC	-58715996	True	NA	-17	True	AATAAA	-17	NA	58734316	58707130	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_58708294_58709416_58709568_58716013_58716180_58716662_58716814_58718195_58718301_58718526_58718689_58719195_58719256_58722149_58722279_58723745_58723903_58734139
transcript_76168.known	chr16	-	1615	9	FSM	ENSG00000125166.13	ENST00000434819.2	1615	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	431.877297388969	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGCACACGTTAGAGGCT	-58716006	True	NA	NA	False	NA	NA	NA	58734326	58707817	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_58708294_58709416_58709568_58716013_58716180_58716662_58716814_58718195_58718301_58718526_58718689_58719195_58719256_58723745_58723903_58734139
transcript_7617.known	chr1	-	3252	15	FSM	ENSG00000010803.16	ENST00000372597.5	3252	15	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_10	20.7552550513092	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGTCTTTTTAATCAGT	-41241558	True	NA	-28	True	AATAAA	-15	NA	41242116	41027201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_41028320_41028583_41028727_41037361_41037542_41046406_41046599_41048689_41048891_41070594_41070722_41075218_41075452_41113282_41113527_41116921_41117011_41142877_41143113_41159724_41159934_41160874_41160899_41161363_41161433_41186120_41186251_41242058
transcript_76182.known	chr16	-	987	3	FSM	ENSG00000125166.13	ENST00000492378.1	987	3	0	0	0	0	multi-exon	FALSE	canonical	3	1270	junction_2	7	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACTAGTAGTAATCCTGA	-58716015	True	NA	NA	False	AATAAA	-29	NA	58734335	58721644	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_58722279_58723745_58723903_58734139
transcript_76186.known	chr16	-	566	1	FSM	ENSG00000224631.4	ENST00000591758.1	566	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3704	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAGCTATCAACCT	NA	False	NA	NA	False	AATAAA	-30	NA	61055964	61055398	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_61055400_61056000
transcript_76189.known	chr16	-	3986	9	FSM	ENSG00000150394.14	ENST00000584337.5	3986	9	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	3.73329613076702	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTCTTTCTCTGAAGAAA	-62036182	True	NA	NA	False	AATAAA	-43	NA	62036402	61725165	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_61727216_61789345_61789483_61817478_61817733_61820925_61821114_61825011_61825180_61857118_61857239_61901178_61901474_62021151_62021603_62036079
transcript_76192.known	chr16	-	6722	13	FSM	ENSG00000140937.14	ENST00000268603.9	6722	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_11	4.28417631134232	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTGATGAGGCAGATTT	-65121748	True	NA	NA	False	AATAAA	-22	NA	65122063	64943752	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_64948100_64950766_64951019_64971578_64971697_64971930_64972065_64972903_64973041_64982047_64982302_64988156_64988345_64991767_64991936_64992914_64993035_64998561_64998857_65004641_65005042_65053803_65053929_65121879
transcript_76194.known	chr16	-	2395	12	FSM	ENSG00000140937.14	ENST00000566827.5	2395	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	4.98758789976189	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGTGTAAACAGGTATT	-65121874	False	NA	NA	False	NA	NA	NA	65121930	64947546	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_64948100_64950766_64951019_64971578_64971697_64971930_64972065_64972903_64973041_64982047_64982302_64988156_64988345_64991767_64991936_64992914_64993035_64998561_64998857_65053803_65053929_65121879
transcript_76195.known	chr16	-	3639	1	FSM	ENSG00000140937.14	ENST00000619158.1	3639	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTTTTGTGTGTACA	NA	False	NA	NA	False	AATAAA	-15	NA	64988334	64984695	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_64984700_64988300
transcript_76196.nnic	chr16	-	643	3	NNC	ENSG00000260834.2	novel	696	3	NA	NA	-71	5	at_least_one_novel_splicesite	FALSE	canonical	3	263	junction_2	322.5	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-65231440	True	NA	-101	True	AATAAA	-22	NA	65235004	65229840	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_65230206_65233014_65233174_65234885
transcript_76198.nnic	chr16	-	772	3	FSM	ENSG00000260834.2	ENST00000691011.1	696	3	-71	-5	-71	5	multi-exon	FALSE	canonical	3	371	junction_2	268.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-65231440	True	NA	-101	True	AATAAA	-22	NA	65235004	65229840	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_65230206_65233014_65233303_65234885
transcript_76203.nnic	chr16	-	400	3	NNC	ENSG00000260834.2	novel	146	2	NA	NA	-71	-10	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	13	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATAACAAGTGAACACAT	-65231440	True	NA	-29	True	AATAAA	-17	NA	65235004	65227904	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_65228022_65228302_65228467_65234885
transcript_76204.nnic	chr16	-	339	3	NNC	ENSG00000260834.2	novel	146	2	NA	NA	-72	-10	at_least_one_novel_splicesite	FALSE	canonical	3	467	junction_2	91.5	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATAACAAGTGAACACAT	-65234990	False	NA	-29	True	AATAAA	-17	NA	65235005	65227904	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_65228022_65233014_65233117_65234885
transcript_76205.nnic	chr16	-	395	3	NNC	ENSG00000260834.2	novel	146	2	NA	NA	-71	-10	at_least_one_novel_splicesite	FALSE	canonical	3	263	junction_2	193.5	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATAACAAGTGAACACAT	-65231440	True	NA	-29	True	AATAAA	-17	NA	65235004	65227904	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_65228022_65233014_65233174_65234885
transcript_76206.nnic	chr16	-	524	3	NIC	ENSG00000260834.2	novel	146	2	NA	NA	-71	-10	combination_of_known_splicesites	FALSE	canonical	3	371	junction_2	139.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATAACAAGTGAACACAT	-65231440	True	NA	-29	True	AATAAA	-17	NA	65235004	65227904	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_65228022_65233014_65233303_65234885
transcript_76209.nnic	chr16	-	587	3	NNC	ENSG00000260834.2	novel	696	3	NA	NA	-72	5	at_least_one_novel_splicesite	FALSE	canonical	3	467	junction_2	220.5	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-65234990	False	NA	-101	True	AATAAA	-22	NA	65235005	65229840	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_65230206_65233014_65233117_65234885
transcript_76211.known	chr16	-	146	2	FSM	ENSG00000260834.2	ENST00000565901.1	146	2	0	0	0	0	multi-exon	FALSE	canonical	3	1283	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAACACATGTGTACAGCA	-65234889	False	NA	-19	True	AATAAA	-27	NA	65234904	65227894	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_65228022_65234885
transcript_76212.nnic	chr16	-	484	2	NIC	ENSG00000260834.2	novel	696	3	NA	NA	-71	5	combination_of_known_splicesites	FALSE	canonical	3	1386	junction_1	0	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-65231440	True	NA	-101	True	AATAAA	-22	NA	65235004	65229840	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_65230206_65234885
transcript_76213.known	chr16	-	4824	10	FSM	ENSG00000166548.17	ENST00000544898.6	4824	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	5.57330497954865	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTGGAGTACTGTGCAG	-66550010	True	NA	NA	False	AATAAA	-15	NA	66550122	66508002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_66512067_66513730_66513812_66517135_66517216_66517788_66517878_66528993_66529068_66531379_66531470_66536963_66537018_66541878_66541954_66548977_66549010_66549937
transcript_76214.known	chr16	-	1156	10	FSM	ENSG00000166548.17	ENST00000564917.5	1156	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	7.79046584131471	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGAGTCGCTCTCATG	-66550080	False	NA	NA	False	NA	NA	NA	66550106	66511705	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_66512067_66513730_66513863_66517135_66517216_66517788_66517878_66528993_66529068_66531379_66531470_66536963_66537018_66541878_66541954_66548977_66549010_66549937
transcript_76216.known	chr16	-	3371	10	FSM	ENSG00000166548.17	ENST00000451102.7	3371	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	7.33333333333333	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTATGTACCTGGTTTTT	-66550398	False	NA	NA	False	AATATA	-22	NA	66550424	66509442	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_66512067_66513730_66513812_66517135_66517216_66517788_66517878_66528993_66529068_66531379_66531470_66536963_66537018_66541878_66541954_66548977_66549010_66550252
transcript_76217.known	chr16	-	4267	10	FSM	ENSG00000166548.17	ENST00000678015.1	4267	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	7.5832824581118	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTATGTACCTGGTTTTT	-66552453	True	NA	NA	False	AATATA	-22	NA	66552479	66509442	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_66512067_66513730_66513812_66517135_66517216_66517788_66517878_66528993_66529068_66531379_66531470_66536963_66537018_66541878_66541954_66548977_66549010_66551411
transcript_76219.known	chr16	-	2745	9	FSM	ENSG00000166548.17	ENST00000527800.6	2745	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	4.79420222769128	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTCCTGAAGCTTTGGA	-66549732	True	NA	0	True	AATAAA	-16	NA	66549856	66510743	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_66512067_66513730_66513812_66517135_66517216_66517788_66517878_66528993_66529068_66531379_66531470_66536963_66537018_66541878_66541954_66548977
transcript_76221.known	chr16	+	656	4	FSM	ENSG00000217555.13	ENST00000264001.9	656	4	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_2	90.149258948085	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTTCTGCAGTTATTT	66550071	True	NA	31	True	ATTAAA	-21	NA	66552575	66566068	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_66552794_66558189_66558349_66563121_66563218_66565885
transcript_76222.known	chr16	+	571	3	FSM	ENSG00000217555.13	ENST00000345436.8	571	3	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	54.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGCAGTTATTTTAAC	66550064	True	NA	35	True	ATTAAA	-25	NA	66552568	66566072	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_66552794_66558189_66558349_66565885
transcript_76223.known	chr16	+	508	3	FSM	ENSG00000217555.13	ENST00000351137.8	508	3	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	67	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGCAGTTATTTTAAC	66550064	True	NA	35	True	ATTAAA	-25	NA	66552568	66566072	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_66552794_66563121_66563218_66565885
transcript_76225.known	chr16	+	585	3	FSM	ENSG00000254788.7	ENST00000527729.5	585	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGCTTCCTCTCGTTGC	66550108	True	NA	NA	False	CATAAA	-27	NA	66552612	66579135	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_66552794_66577103_66577203_66578830
transcript_76226.nic	chr16	+	1858	6	NIC	ENSG00000140931.20	novel	2330	6	NA	NA	11	-107	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	94.8071727244305	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCACTTGCTTGGAGTGT	66604310	False	NA	24	True	AAAAAG	-22	NA	66604320	66613742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_66604450_66604730_66604953_66608308_66608465_66609434_66609531_66609882_66610004_66612608
transcript_76227.known	chr16	+	2159	6	FSM	ENSG00000140931.20	ENST00000361909.8	2159	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	94.0097867245746	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTATTTCCCTAACCTT	66604265	True	NA	27	True	AATACA	-24	NA	66604275	66613892	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_66604556_66604730_66604953_66608308_66608465_66609434_66609531_66609882_66610004_66612608
transcript_76229.known	chr16	+	1950	5	FSM	ENSG00000140931.20	ENST00000566756.5	1950	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	99.7130257288385	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGTTTTAGCAAAAATACA	66602396	True	NA	-16	True	NA	NA	NA	66604740	66613849	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_66604953_66608308_66608465_66609434_66609531_66609758_66610004_66612608
transcript_76230.known	chr16	+	1901	5	FSM	ENSG00000140931.20	ENST00000567572.6	1901	5	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_4	8.52569645248997	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATCCTTTATTTCCCTA	66602359	True	NA	22	True	AATACA	-19	NA	66604703	66613887	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_66604953_66608308_66608465_66609434_66609531_66609882_66610004_66612608
transcript_76233.known	chr16	+	824	4	FSM	ENSG00000140931.20	ENST00000564060.5	824	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	102.324103818319	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAAAGCAGAGCCTTGTC	66602387	True	NA	NA	False	NA	NA	NA	66604731	66612934	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_66604953_66608308_66608465_66609882_66610004_66612608
transcript_76236.known	chr16	-	4326	13	FSM	ENSG00000135720.13	ENST00000258198.7	4326	13	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_9	29.6436005835249	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGTGGCTTTCTTTAT	-66744099	True	NA	-3	True	AATAAA	-23	NA	66751609	66720892	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_66723823_66725827_66725945_66727687_66727806_66728200_66728243_66729039_66729100_66730111_66730224_66732338_66732475_66734217_66734312_66736074_66736245_66742437_66742669_66749196_66749314_66751272_66751347_66751484
transcript_7624.known	chr1	-	363	2	FSM	ENSG00000010803.16	ENST00000488592.1	363	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATGAATTTTCCAGATTG	-41241596	True	NA	NA	False	NA	NA	NA	41242154	41185983	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_41186251_41242058
transcript_76242.known	chr16	-	1502	12	FSM	ENSG00000135720.13	ENST00000443351.6	1502	12	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_9	83.7435084446046	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAAGCACATCTGGGCTTC	-66744091	True	NA	NA	False	NA	NA	NA	66751601	66723477	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_66723823_66725827_66725945_66727687_66727806_66728200_66728243_66729039_66729100_66730111_66730224_66732338_66732475_66734217_66734312_66736074_66736245_66749196_66749314_66751272_66751347_66751484
transcript_76252.nic	chr16	-	1302	11	ISM	ENSG00000135720.13	ENST00000258198.7	4326	13	-23	6795	-23	309	5prime_fragment	FALSE	canonical	3	217	junction_7	31.046577911261	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGTATTCCTCAAAAGTA	-66744122	True	NA	NA	False	AGTAAA	-24	NA	66751632	66727687	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_66727806_66728200_66728243_66729039_66729100_66730111_66730224_66732338_66732475_66734217_66734312_66736074_66736245_66742437_66742669_66749196_66749314_66751272_66751347_66751484
transcript_76255.nic	chr16	-	1097	7	ISM	ENSG00000135720.13	ENST00000258198.7	4326	13	-243	11539	-243	-423	5prime_fragment	FALSE	canonical	3	217	junction_3	31.3036206638572	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCGACTTGTTGTATAAGT	-66751690	False	NA	NA	False	NA	NA	NA	66751852	66732431	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_66732475_66734217_66734312_66736074_66736245_66742437_66742669_66749196_66749314_66751272_66751347_66751484
transcript_7626.known	chr1	-	5225	13	FSM	ENSG00000198815.9	ENST00000361346.6	5225	13	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_8	25.2535751044393	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACAACACTGATTGGTCT	-42330012	True	NA	-12	True	AATAAA	-19	NA	42335235	42176547	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_42179826_42181916_42182025_42188736_42188929_42189302_42189405_42191302_42191720_42194889_42195065_42199101_42199231_42205761_42205864_42227882_42227967_42265114_42265190_42278347_42278673_42311049_42311111_42335058
transcript_76262.known	chr16	-	1909	21	FSM	ENSG00000159593.15	ENST00000379463.6	1909	21	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_20	328.570764828522	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATGTAGTCTTGTTCTT	-66814340	True	NA	NA	False	AATAAA	-17	NA	66830976	66802879	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_66803119_66805776_66805827_66805911_66806027_66808520_66808614_66808988_66809076_66810373_66810414_66810696_66810773_66813563_66813698_66813786_66813847_66816580_66816673_66816964_66817029_66817424_66817488_66818527_66818638_66821449_66821560_66823226_66823307_66823528_66823601_66824854_66824886_66826522_66826584_66826676_66826781_66827979_66828078_66830846
transcript_76265.known	chr16	-	1813	20	FSM	ENSG00000159593.15	ENST00000290810.8	1813	20	0	0	0	0	multi-exon	FALSE	canonical	3	1007	junction_19	81.3157383750478	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTAGTCTTGTTCTTTG	-66814340	True	NA	NA	False	AATAAA	-19	NA	66830976	66802877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_66803119_66805776_66805827_66805911_66806027_66808520_66808614_66808988_66809076_66810373_66810414_66810696_66810773_66813563_66813698_66813786_66813847_66816580_66816673_66816964_66817029_66817424_66817488_66818527_66818638_66821449_66821560_66823226_66823307_66823528_66823601_66824854_66824886_66826522_66826584_66826676_66826781_66830846
transcript_76267.known	chr16	-	1654	19	FSM	ENSG00000159593.15	ENST00000394074.6	1654	19	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_18	265.255851333513	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTTCTTAATAAACATT	-66814319	True	NA	NA	False	NA	NA	NA	66830955	66802911	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_66803119_66805776_66805827_66805911_66806027_66808520_66808614_66808988_66809076_66810373_66810414_66810696_66810773_66813563_66813698_66813786_66813847_66816580_66816673_66816964_66817029_66817424_66817488_66818527_66818638_66821449_66821560_66823226_66823307_66823528_66823601_66824854_66824886_66826522_66826584_66830846
transcript_76283.nic	chr16	-	825	10	ISM	ENSG00000159593.15	ENST00000290810.8	1813	20	0	14087	0	-318	5prime_fragment	FALSE	canonical	3	1007	junction_9	83.0115267914457	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATATGGGATATGATTAA	-66814340	True	NA	46	True	TATAAA	-35	NA	66830976	66816964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_66817029_66817424_66817488_66818527_66818638_66821449_66821560_66823226_66823307_66823528_66823601_66824854_66824886_66826522_66826584_66826676_66826781_66830846
transcript_7629.known	chr1	-	5106	12	FSM	ENSG00000198815.9	ENST00000361776.5	5106	12	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_7	29.326038411719	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACACTGATTGGTCTCCG	-42329992	True	NA	-9	True	AATAAA	-22	NA	42335215	42176544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_42179826_42181916_42182025_42188736_42188929_42189302_42189405_42191302_42191720_42194889_42195065_42199101_42199231_42227882_42227967_42265114_42265190_42278347_42278673_42311049_42311111_42335058
transcript_76290.nic	chr16	-	752	9	ISM	ENSG00000159593.15	ENST00000290810.8	1813	20	0	14556	0	0	5prime_fragment	FALSE	canonical	3	1007	junction_8	86.7236090980997	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTGAAGTATGTCCTTT	-66814340	True	NA	NA	False	NA	NA	NA	66830976	66817433	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_66817488_66818527_66818638_66821449_66821560_66823226_66823307_66823528_66823601_66824854_66824886_66826522_66826584_66826676_66826781_66830846
transcript_76293.nic	chr16	-	762	8	ISM	ENSG00000159593.15	ENST00000290810.8	1813	20	-65	15651	-64	104	5prime_fragment	FALSE	canonical	3	1007	junction_7	92.3082679207589	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGTAGTGTGTGTGACC	NA	False	NA	NA	False	NA	NA	NA	66831041	66818528	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_66818638_66821449_66821560_66823226_66823307_66823528_66823601_66824854_66824886_66826522_66826584_66826676_66826781_66830846
transcript_76294.known	chr16	+	1518	7	FSM	ENSG00000168748.14	ENST00000338437.7	1518	7	0	0	0	0	multi-exon	TRUE	canonical	2	14	junction_3	2.80871659105879	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAATTGAGTGCTTGTGC	66844299	True	NA	NA	False	AATAAA	-22	NA	66844413	66854147	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_66844528_66847029_66847228_66850540_66850660_66851462_66851559_66851663_66851727_66852711_66852868_66853375
transcript_76296.known	chr16	+	574	3	FSM	ENSG00000172840.7	ENST00000561704.1	574	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGTGTTGCGGTTTGAG	66875760	True	NA	NA	False	NA	NA	NA	66880518	66884594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_66880641_66883014_66883103_66884230
transcript_76302.known	chr16	+	6997	2	FSM	ENSG00000172840.7	ENST00000311765.4	6997	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTTAGTTTCTTTTGG	66875756	True	NA	4	True	ATTAAA	-24	NA	66880514	66891101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_66880641_66884230
transcript_76305.nic	chr16	+	2425	2	ISM	ENSG00000172840.7	ENST00000566805.5	558	5	-39	6500	-5	1489	5prime_fragment	FALSE	canonical	2	13	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGCCTACTGTAAGCATGC	66875751	True	NA	-10	True	TTTAAA	-23	NA	66880509	66886500	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_66880665_66884230
transcript_76307.known	chr16	+	362	2	FSM	ENSG00000172840.7	ENST00000568398.1	362	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGTATGTCTCAAATAGG	66875772	True	NA	NA	False	NA	NA	NA	66880530	66884366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_66880757_66884230
transcript_76310.known	chr16	-	1460	5	FSM	ENSG00000166592.12	ENST00000299759.11	1460	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.22474487139159	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGGCTGTTGACTCTCT	-66925520	False	NA	NA	False	AATAAA	-16	NA	66925535	66921684	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_66922354_66923515_66923721_66923845_66923920_66924809_66925195_66925408
transcript_76311.known	chr16	-	668	5	FSM	ENSG00000166595.12	ENST00000422424.7	668	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	577.952149835953	535	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCCAGCATGCCTTGGTG	-66923482	True	NA	-11	True	AATAAA	-16	NA	66934402	66932064	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_66932301_66932779_66932826_66933613_66933740_66933986_66934067_66934222
transcript_76315.known	chr16	+	3868	12	FSM	ENSG00000172831.14	ENST00000417689.6	3868	12	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_10	27.2730303013468	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAATAAAAATAAATTCT	66932904	True	NA	-21	True	NA	NA	NA	66934443	66945069	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_66935712_66938036_66938242_66939216_66939359_66940221_66940356_66940436_66940696_66941123_66941223_66941505_66941647_66941767_66941849_66942104_66942250_66942647_66942738_66943298_66943372_66943838
transcript_76318.known	chr16	+	2871	12	FSM	ENSG00000172831.14	ENST00000317091.10	2871	12	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	11.3202809298435	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGTCTGCCTCTCCCC	66935504	False	NA	6	True	AATAAA	-18	NA	66935515	66945096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_66935712_66938036_66938242_66939216_66939359_66940221_66940356_66940436_66940696_66941123_66941223_66941505_66941647_66941767_66941849_66942104_66942250_66942647_66942786_66943298_66943372_66943838
transcript_76326.known	chr16	+	3391	12	FSM	ENSG00000172831.14	ENST00000568470.6	3391	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	25.7726871893227	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	66932931	True	NA	NA	False	NA	NA	NA	66934470	66944306	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_66935977_66938036_66938242_66939216_66939359_66940221_66940356_66940436_66940696_66941123_66941223_66941505_66941647_66941767_66941849_66942104_66942250_66942647_66942786_66943298_66943372_66943838
transcript_76335.nic	chr16	+	3823	11	ISM	ENSG00000172831.14	ENST00000317091.10	2871	12	-1257	772	-185	18	intron_retention	FALSE	canonical	3	72	junction_1	11.8507383736204	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAGTGTGTGATTAGAA	NA	False	NA	NA	False	NA	NA	NA	66934258	66944324	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_66935712_66938036_66938242_66939216_66939359_66940221_66940356_66940436_66940696_66941123_66941223_66941505_66941647_66941767_66941849_66942104_66942250_66942647_66942786_66943298
transcript_7634.nic	chr1	-	486	3	ISM	ENSG00000198815.9	ENST00000445886.5	1326	8	-11	87016	3	-13491	5prime_fragment	FALSE	canonical	3	136	junction_1	3.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTTTAAGTGAAATTTAT	-42330009	True	NA	NA	False	AAAAAG	-5	NA	42335232	42278421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_42278673_42311049_42311111_42335058
transcript_76372.known	chr16	+	584	6	FSM	ENSG00000067955.15	ENST00000561924.6	584	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	218.611619087367	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATACACATTGCTTCTAG	67025977	True	NA	NA	False	NA	NA	NA	67029115	67098811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67029150_67029726_67029814_67036638_67036756_67066681_67066799_67082212_67082340_67098709
transcript_76373.known	chr16	+	3103	6	FSM	ENSG00000067955.15	ENST00000412916.7	3103	6	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_5	122.18739705878	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGGTCTTGGCTCTTTCTT	67026010	True	NA	72	True	AATAAA	-18	NA	67029148	67101058	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67029486_67029726_67029814_67036638_67036756_67066681_67066799_67082212_67082309_67098709
transcript_76376.known	chr16	+	3134	6	FSM	ENSG00000067955.15	ENST00000290858.11	3134	6	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_5	107.919229055808	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGGTCTTGGCTCTTTCTT	67026010	True	NA	72	True	AATAAA	-18	NA	67029148	67101058	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67029486_67029726_67029814_67036638_67036756_67066681_67066799_67082212_67082340_67098709
transcript_76383.nic	chr16	+	1130	4	ISM	ENSG00000067955.15	ENST00000650873.1	2197	7	-229	32864	-8	267	5prime_fragment	FALSE	canonical	3	512	junction_2	47.0177271533479	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGACGTGGTGGCTCACA	67025969	True	NA	NA	False	GATAAA	-36	NA	67029107	67067229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_67029486_67029726_67029814_67036638_67036756_67066681
transcript_76388.known	chr16	+	2818	6	FSM	ENSG00000067955.15	ENST00000651988.1	2818	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	230.062947907741	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACTTCTGTGTAGTAA	67028970	False	NA	49	True	NA	NA	NA	67028983	67101035	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67029028_67029726_67029814_67036638_67036756_67066681_67066799_67082212_67082340_67098709
transcript_7639.nnic	chr1	+	1419	5	NNC	ENSG00000177181.15	novel	10577	5	NA	NA	-11	5014	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_4	65.1325571431062	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCCCGACTGATCAGTATG	42378308	True	NA	15	True	TATAAA	-16	NA	42380780	42415179	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_42381098_42399403_42399635_42404510_42404598_42409983_42410072_42414483
transcript_76391.known	chr16	+	1353	17	FSM	ENSG00000125149.12	ENST00000569600.5	1353	17	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	39.8134320926996	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACACCACCACCCATGCCC	67107459	True	NA	NA	False	NA	NA	NA	67109962	67147131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67109990_67110118_67110240_67120111_67120195_67125958_67126043_67131285_67131330_67132445_67132526_67132816_67132912_67134167_67134266_67134354_67134468_67139983_67140118_67140510_67140595_67144293_67144377_67144833_67144878_67145375_67145420_67145569_67145629_67146277_67146351_67147044
transcript_76393.nic	chr16	+	2505	17	NIC	ENSG00000125149.12	novel	1353	17	NA	NA	-29	-327	intron_retention	FALSE	canonical	3	63	junction_1	32.0134249183058	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTCATGTACAGCCTCAT	67107408	True	NA	4	True	NA	NA	NA	67109911	67148217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_67110005_67110118_67110240_67120111_67120195_67125958_67126043_67131285_67131330_67132445_67132526_67132816_67132912_67134167_67134266_67134354_67134468_67139983_67140118_67140510_67140595_67144293_67144377_67144833_67144878_67145375_67145420_67145569_67145629_67146277_67146351_67147044
transcript_76394.nic	chr16	+	2832	17	NIC	ENSG00000125149.12	novel	1353	17	NA	NA	-29	0	intron_retention	FALSE	canonical	3	63	junction_1	32.0134249183058	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGTATTGGTTTTTTG	67107408	True	NA	14	True	NA	NA	NA	67109911	67148544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_67110005_67110118_67110240_67120111_67120195_67125958_67126043_67131285_67131330_67132445_67132526_67132816_67132912_67134167_67134266_67134354_67134468_67139983_67140118_67140510_67140595_67144293_67144377_67144833_67144878_67145375_67145420_67145569_67145629_67146277_67146351_67147044
transcript_76397.nic	chr16	+	2762	17	NIC	ENSG00000125149.12	novel	2917	16	NA	NA	0	0	intron_retention	TRUE	canonical	0	0	junction_1	45.8798958559193	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGTATTGGTTTTTTG	67107437	True	NA	14	True	NA	NA	NA	67109940	67148544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_67109990_67110144_67110240_67120111_67120195_67125958_67126043_67131285_67131330_67132445_67132526_67132816_67132912_67134167_67134266_67134354_67134468_67139983_67140118_67140510_67140595_67144293_67144377_67144833_67144878_67145375_67145420_67145569_67145629_67146277_67146351_67147044
transcript_7640.known	chr1	+	10577	5	FSM	ENSG00000177181.15	ENST00000431473.4	10577	5	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_4	21.7313138121007	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCATGTTTGCAATTTACT	42378319	True	NA	NA	False	ATTAAA	-19	NA	42380791	42424232	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42381098_42399403_42399635_42404510_42404598_42409983_42410188_42414483
transcript_76404.known	chr16	-	2702	2	FSM	ENSG00000237172.4	ENST00000449549.4	2702	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTTTTCTTCTCAGTTC	-67150682	True	NA	NA	False	ATTAAA	-16	NA	67150998	67148103	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67150672_67150864
transcript_76406.known	chr16	+	1702	13	FSM	ENSG00000102878.18	ENST00000521374.6	1702	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.640095478989051	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTTTCTGGTCTCTTT	67164729	False	NA	NA	False	CATAAA	-15	NA	67164744	67169941	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67164935_67165521_67165631_67165718_67165847_67165945_67166071_67166319_67166396_67166557_67166623_67167119_67167223_67167474_67167600_67167719_67167948_67168830_67168937_67169035_67169102_67169278_67169349_67169630
transcript_76408.known	chr16	+	1460	4	FSM	ENSG00000135722.9	ENST00000519917.5	1460	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.942809041582063	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCGTCCTATTAAAGG	67159945	True	NA	NA	False	AATAAA	-15	NA	67159960	67164174	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67160057_67161734_67161938_67162847_67163853_67164018
transcript_76418.known	chr16	-	3386	7	FSM	ENSG00000196123.13	ENST00000563902.2	3386	7	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_3	32.142477951908	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGGCCTTTGTCTAC	-67181411	True	NA	0	True	ATTAAA	-17	NA	67183963	67175598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67176976_67178009_67178108_67178198_67178505_67179429_67179563_67179814_67179959_67180040_67180667_67183261
transcript_76422.known	chr16	+	1592	6	FSM	ENSG00000140939.14	ENST00000564053.5	1592	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.403845442912	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGGAGGGTGACTTCTCT	67170410	True	NA	NA	False	NA	NA	NA	67170539	67175485	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67170575_67171151_67171458_67173861_67174047_67174161_67174465_67174620_67174945_67175046
transcript_76426.known	chr16	+	1394	4	FSM	ENSG00000140939.14	ENST00000268605.11	1394	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	8.73053390247253	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCGTTTCTGAGTTTTA	NA	False	NA	21	True	AATATA	-30	NA	67170496	67175735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67170575_67174161_67174465_67174620_67174945_67175046
transcript_76430.known	chr16	+	1351	4	FSM	ENSG00000140939.14	ENST00000568146.1	1351	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	8.25967446224258	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCGTTTCTGAGTTTTA	67173915	False	NA	21	True	AATATA	-30	NA	67174001	67175735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67174047_67174161_67174455_67174620_67174945_67175046
transcript_76431.known	chr16	-	3500	8	FSM	ENSG00000196123.13	ENST00000561621.5	3500	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	30.5774359918672	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGATGTGTGTGGCCTTTG	-67181400	True	NA	-5	True	ATTAAA	-12	NA	67183952	67175603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67176976_67178009_67178098_67178198_67178505_67179429_67179563_67179814_67179959_67180040_67180667_67181557_67181698_67183261
transcript_76432.known	chr16	-	2824	3	FSM	ENSG00000196123.13	ENST00000561679.5	2824	3	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	8	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGATGTGTGTGGCCTTTG	-67179532	False	NA	-5	True	ATTAAA	-12	NA	67179552	67175603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67176976_67178009_67178108_67178198
transcript_76433.known	chr16	-	2429	14	FSM	ENSG00000179044.16	ENST00000314586.11	2429	14	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_12	4.49983563144913	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGAGTCTGTGTGTGTT	-67189930	True	NA	NA	False	AATAAA	-15	NA	67190136	67184378	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67184605_67184685_67184811_67184901_67185058_67185135_67185259_67185360_67185491_67186236_67186348_67186556_67186658_67186758_67186885_67187020_67187139_67187224_67187838_67188720_67188941_67189019_67189181_67189630_67189684_67189970
transcript_76443.nic	chr16	-	2610	12	NIC	ENSG00000179044.16	novel	2429	14	NA	NA	-7	0	intron_retention	FALSE	canonical	3	8	junction_10	4.52906134802951	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGAGTCTGTGTGTGTT	-67189939	True	NA	NA	False	AATAAA	-15	NA	67190145	67184378	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_67185058_67185135_67185259_67185360_67185491_67186236_67186348_67186556_67186658_67186758_67186885_67187020_67187139_67187224_67187838_67188720_67188941_67189019_67189181_67189630_67189684_67189970
transcript_7645.known	chr1	+	966	3	FSM	ENSG00000127125.9	ENST00000372562.1	966	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	321	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACCTGATATGATGTCA	42456085	False	NA	NA	False	NA	NA	NA	42456116	42460081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42456500_42457246_42457351_42459602
transcript_76455.known	chr16	+	2110	10	FSM	ENSG00000205250.9	ENST00000379378.8	2110	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	312.491580133483	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGATGTGGTTCTTTGG	67186482	True	NA	21	True	AATAAA	-18	NA	67192154	67198918	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67192363_67192760_67192871_67193008_67193171_67193471_67193516_67194397_67194460_67194685_67194981_67195781_67196007_67197598_67197647_67197866_67197912_67198007
transcript_76468.nic	chr16	+	2309	9	NIC	ENSG00000205250.9	novel	2110	10	NA	NA	-62	0	intron_retention	FALSE	canonical	0	0	junction_2	331.410904316681	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGATGTGGTTCTTTG	67192031	False	NA	20	True	AATAAA	-17	NA	67192092	67198917	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_67192363_67192760_67193171_67193471_67193516_67194397_67194460_67194685_67194981_67195781_67196007_67197598_67197647_67197866_67197912_67198007
transcript_7647.known	chr1	+	984	3	FSM	ENSG00000127125.9	ENST00000372556.3	984	3	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	250.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTGTTTTGTTTGAAA	42450923	True	NA	23	True	AATAAA	-33	NA	42456560	42460414	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42456629_42457246_42457351_42459602
transcript_7649.known	chr1	+	2269	3	FSM	ENSG00000127125.9	ENST00000372561.4	2269	3	0	0	0	0	multi-exon	FALSE	canonical	3	549	junction_1	53	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAAGACTGAAATACTTC	42450905	True	NA	16	True	AATAAA	-26	NA	42456542	42461236	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42457074_42457246_42457351_42459602
transcript_76490.known	chr16	+	2615	8	FSM	ENSG00000205250.9	ENST00000567007.5	2615	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	349.192479522544	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGATGTGGTTCTTTG	67186512	True	NA	20	True	AATAAA	-17	NA	67192184	67198917	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67193171_67193471_67193516_67194397_67194460_67194685_67194981_67195781_67196007_67197598_67197647_67197866_67197912_67198007
transcript_76491.known	chr16	+	2486	20	FSM	ENSG00000102890.16	ENST00000393997.8	2486	20	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_1	12.4375448049695	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGAGCCAGCTCTGTA	67198089	True	NA	6	True	AATAAA	-20	NA	67199130	67204004	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67199405_67199552_67199594_67199683_67199757_67199950_67200002_67200191_67200362_67200450_67200551_67200656_67200809_67200889_67200969_67201384_67201436_67201519_67201643_67201741_67201874_67201976_67202079_67202175_67202285_67202396_67202534_67202626_67202791_67202891_67203005_67203118_67203224_67203326_67203410_67203496_67203584_67203664
transcript_76512.known	chr16	+	2281	19	FSM	ENSG00000102890.16	ENST00000477898.5	2281	19	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	11.4060845793856	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCTGAGCCTGTGACAGT	67199439	True	NA	31	True	AATAAA	-45	NA	67199508	67204029	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67199594_67199683_67199757_67199950_67200002_67200191_67200362_67200450_67200551_67200656_67200809_67200889_67200969_67201384_67201436_67201519_67201643_67201741_67201874_67201976_67202079_67202175_67202285_67202396_67202534_67202626_67202791_67202891_67203005_67203118_67203224_67203326_67203410_67203496_67203584_67203664
transcript_76513.known	chr16	-	1468	7	FSM	ENSG00000125122.17	ENST00000637247.1	1468	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.4142135623731	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCCTTGTCTTAAGTTCT	-67226760	True	NA	NA	False	ATTAAA	-14	NA	67226818	67207139	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67207505_67207598_67207774_67207872_67208091_67208311_67208456_67210047_67210323_67223825_67223928_67226629
transcript_76516.known	chr16	+	776	6	FSM	ENSG00000168701.19	ENST00000304800.14	776	6	0	0	0	0	multi-exon	FALSE	canonical	3	533	junction_4	55.3953066604022	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATGGCTGTGTGGGTGA	67223971	True	NA	25	True	AATAAA	-15	NA	67227129	67229278	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67227225_67227835_67227932_67228354_67228415_67228494_67228632_67228796_67228882_67228975
transcript_76517.known	chr16	+	775	6	FSM	ENSG00000168701.19	ENST00000562235.5	775	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	241.811165995287	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATGGCTGTGTGGGTGA	67223998	True	NA	25	True	AATAAA	-15	NA	67227156	67229278	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67227225_67227835_67227932_67228354_67228415_67228494_67228658_67228796_67228882_67228975
transcript_76518.known	chr16	+	887	6	FSM	ENSG00000168701.19	ENST00000563953.5	887	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	253.17630220856	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCTTAGAATGTGGCTG	67223961	True	NA	9	True	NA	NA	NA	67227119	67229262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67227225_67227718_67227932_67228354_67228415_67228494_67228632_67228796_67228882_67228975
transcript_7652.known	chr1	+	793	2	FSM	ENSG00000127125.9	ENST00000372560.3	793	2	0	0	0	0	multi-exon	FALSE	canonical	3	549	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAGTGAGGGAGCTGGAC	42450901	True	NA	NA	False	NA	NA	NA	42456538	42457504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42457074_42457246
transcript_76522.known	chr16	+	915	5	FSM	ENSG00000168701.19	ENST00000567193.5	915	5	0	0	0	0	multi-exon	FALSE	canonical	3	601	junction_1	35.6467039149484	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGGTATACTTATACTC	67223944	True	NA	-28	True	NA	NA	NA	67227102	67229225	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67227225_67227835_67227932_67228354_67228415_67228494_67228882_67228975
transcript_76524.known	chr16	+	832	5	FSM	ENSG00000168701.19	ENST00000565201.1	832	5	0	0	0	0	multi-exon	FALSE	canonical	3	533	junction_4	61.9273768215641	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATGGCTGTGTGGGTGA	67224009	True	NA	25	True	AATAAA	-15	NA	67227167	67229278	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67227225_67227835_67227932_67228354_67228415_67228494_67228632_67228796
transcript_7653.known	chr1	+	1617	2	FSM	ENSG00000127125.9	ENST00000472013.1	1617	2	0	0	0	0	multi-exon	FALSE	canonical	3	655	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGTTTTGTTTTGTTTGA	42450906	True	NA	21	True	AATAAA	-31	NA	42456543	42460412	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42457351_42459602
transcript_76532.nic	chr16	-	3907	23	NIC	ENSG00000135723.14	novel	3813	22	NA	NA	-70	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_12	40.3670401922695	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTTTCTCTTCTTTCAGG	-67245154	True	NA	-1	True	AATAAA	-20	NA	67247551	67229388	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_67229719_67229792_67229991_67230065_67230229_67230313_67230507_67230600_67230792_67231187_67231350_67231429_67231550_67231636_67231820_67232038_67232195_67233656_67234268_67234356_67234473_67236410_67236435_67236556_67236734_67236965_67237115_67237238_67237383_67237474_67237570_67237656_67237769_67238033_67238129_67238201_67238308_67238379_67238448_67238902_67238968_67239347_67239455_67247209
transcript_7654.known	chr1	+	937	11	FSM	ENSG00000171960.12	ENST00000678038.1	937	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	178.06754336487	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGCGTATGTTTTTTTT	NA	False	NA	8	True	AATAAA	-8	NA	42658334	42676748	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42658513_42658843_42658909_42659227_42659252_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350_42667441_42668046_42668152_42676583
transcript_76551.known	chr16	-	3813	22	FSM	ENSG00000135723.14	ENST00000258201.9	3813	22	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_18	26.6719382544545	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTTTCTCTTCTTTCAGG	-67245084	True	NA	-1	True	AATAAA	-20	NA	67247481	67229388	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67229719_67229792_67229991_67230065_67230229_67230313_67230507_67230600_67230792_67231187_67231350_67231429_67231550_67231636_67231820_67232038_67232195_67233656_67234268_67234356_67234473_67236556_67236734_67236965_67237115_67237238_67237383_67237474_67237570_67237656_67237769_67238033_67238129_67238201_67238308_67238379_67238448_67238902_67238968_67239347_67239455_67247209
transcript_76555.nnic	chr16	-	3775	22	NNC	ENSG00000135723.14	novel	3813	22	NA	NA	-70	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	40.2593632156622	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTTTCTCTTCTTTCAGG	-67245154	True	NA	-1	True	AATAAA	-20	NA	67247551	67229388	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_67229719_67229792_67229991_67230065_67230229_67230313_67230507_67230600_67230792_67231295_67231350_67231429_67231550_67231636_67231820_67232038_67232195_67233656_67234268_67234356_67234473_67236556_67236734_67236965_67237115_67237238_67237383_67237474_67237570_67237656_67237769_67238033_67238129_67238201_67238308_67238379_67238448_67238902_67238968_67239347_67239455_67247209
transcript_7657.known	chr1	+	1036	10	FSM	ENSG00000171960.12	ENST00000678333.1	1036	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	140.722562178823	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATCCCTGTAATCCCAGC	42647845	True	NA	NA	False	NA	NA	NA	42658435	42676202	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42658513_42658843_42658909_42659227_42659252_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350_42667441_42675732
transcript_76571.nic	chr16	-	3721	21	NIC	ENSG00000135723.14	novel	3813	22	NA	NA	-70	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_5	39.9998437496948	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTTTCTCTTCTTTCAGG	-67245154	True	NA	-1	True	AATAAA	-20	NA	67247551	67229388	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_67229719_67229792_67229991_67230065_67230229_67230313_67230507_67230600_67230792_67231429_67231550_67231636_67231820_67232038_67232195_67233656_67234268_67234356_67234473_67236556_67236734_67236965_67237115_67237238_67237383_67237474_67237570_67237656_67237769_67238033_67238129_67238201_67238308_67238379_67238448_67238902_67238968_67239347_67239455_67247209
transcript_7658.known	chr1	+	973	10	FSM	ENSG00000171960.12	ENST00000677900.1	973	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	143.801560801296	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTAGTTGCTTTCTTCCTG	NA	False	NA	NA	False	AATAAA	-25	NA	42658334	42676043	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42658513_42658843_42658909_42659227_42659252_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350_42667441_42675737
transcript_76586.known	chr16	+	3708	16	FSM	ENSG00000135740.17	ENST00000299798.16	3708	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	14.2382895352247	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGTCTTGTGTCCATGT	67248849	True	NA	19	True	ATTAAA	-16	NA	67248978	67272191	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67249202_67252541_67252845_67255020_67255185_67255392_67255472_67255752_67255931_67256468_67256690_67256910_67257114_67257344_67257435_67257530_67257602_67258317_67258448_67259572_67259662_67259819_67259947_67264351_67264523_67265039_67265107_67266087_67266226_67270737
transcript_7659.known	chr1	+	754	10	FSM	ENSG00000171960.12	ENST00000304979.8	754	10	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_3	28.5064428498299	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTTTTTTCTTTTGGT	42647832	True	NA	18	True	AATAAA	-18	NA	42658422	42676758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42658513_42658843_42658909_42659227_42659252_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350_42667441_42676583
transcript_7661.known	chr1	+	849	10	FSM	ENSG00000171960.12	ENST00000677307.1	849	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	139.484058118252	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTTTTTTCTTTTGGT	42647856	True	NA	18	True	AATAAA	-18	NA	42658446	42676758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42658513_42658843_42658909_42659227_42659371_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350_42667441_42676583
transcript_76613.nnic	chr16	+	2612	4	NIC	ENSG00000135740.17	novel	3990	15	NA	NA	-388	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	18.3726850393609	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTGTCTTGTGTCCATG	67247828	True	NA	18	True	ATTAAA	-15	NA	67248483	67272190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_67249202_67252541_67252845_67266087_67266226_67270737
transcript_76615.nic	chr16	+	4525	22	NIC	ENSG00000196155.13	novel	6782	21	NA	NA	-59	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	9.10732181585763	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCTGATGGGCACATGCA	NA	False	NA	16	True	AATAAA	-18	NA	67278774	67289480	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_67278883_67279875_67280544_67280710_67280807_67280881_67281006_67281090_67281185_67281566_67281645_67281723_67281838_67282008_67282108_67282200_67282350_67282502_67282642_67282741_67282859_67284274_67284458_67284712_67285216_67285289_67285537_67286273_67286364_67286444_67286667_67286748_67286920_67286999_67287178_67287897_67288015_67288166_67288401_67288488_67288605_67288802
transcript_76616.known	chr16	+	6782	21	FSM	ENSG00000196155.13	ENST00000360461.9	6782	21	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	7.49983333148144	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTCTGATGGGCACATGC	NA	False	NA	15	True	AATAAA	-17	NA	67277509	67289479	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67280544_67280710_67280807_67280881_67281006_67281090_67281185_67281566_67281645_67281723_67281838_67282008_67282108_67282200_67282350_67282502_67282642_67282741_67282859_67284274_67284458_67284712_67285216_67285289_67285537_67286273_67286364_67286444_67286667_67286748_67286920_67286999_67287178_67287897_67288015_67288166_67288401_67288488_67288605_67288802
transcript_76620.known	chr16	-	1021	4	FSM	ENSG00000159713.11	ENST00000393957.7	1021	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.24721912892465	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCCTGGTTGACGATGA	-67393465	False	33	0	True	AATAAA	-18	NA	67393498	67389808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67390363_67390478_67390633_67390923_67391118_67393379
transcript_76624.known	chr16	-	2252	12	FSM	ENSG00000159714.12	ENST00000565726.3	2252	12	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	3.86336897470469	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCCGTGGGGAGGTGGCG	-67416013	True	NA	NA	False	NA	NA	NA	67416477	67394151	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67394894_67395001_67395063_67395186_67395281_67395483_67395567_67398211_67398325_67398572_67398732_67398819_67398945_67399354_67399457_67400956_67401133_67406199_67406443_67407766_67407814_67416170
transcript_76627.known	chr16	-	2047	11	FSM	ENSG00000159714.12	ENST00000348579.6	2047	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	6.34034699365894	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCGCGCTTACTTTCTTAA	-67416010	True	NA	-1	True	AATAAA	-21	NA	67416474	67394418	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67394894_67395001_67395222_67395483_67395567_67398211_67398325_67398572_67398732_67398819_67398945_67399354_67399457_67400956_67401133_67406199_67406443_67407766_67407814_67416170
transcript_76631.known	chr16	-	1189	5	FSM	ENSG00000159714.12	ENST00000566075.1	1189	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	5.61248608016091	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGACGTCGCGCTTACTT	-67396224	False	NA	-7	True	AATAAA	-15	NA	67396257	67394424	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67394894_67395001_67395063_67395186_67395281_67395483_67395567_67395775
transcript_76639.nic	chr16	+	1866	5	NIC	ENSG00000176387.7	novel	540	4	NA	NA	-235	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	73.6796274420548	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGCAGGTGCTGTTTGGA	NA	False	NA	19	True	AATAAA	-25	NA	67430416	67437553	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_67430780_67435627_67435841_67435956_67436143_67436248_67436387_67436587
transcript_7664.known	chr1	+	2315	9	FSM	ENSG00000171960.12	ENST00000678803.1	2315	9	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_3	30.2241625194148	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCTGGATGACATCAAAAA	42647835	True	NA	NA	False	NA	NA	NA	42658425	42669179	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42658513_42658843_42658909_42659227_42659252_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350
transcript_76640.nnic	chr16	+	1730	5	NNC	ENSG00000176387.7	novel	540	4	NA	NA	-214	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	74.1046557241851	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGCAGGTGCTGTTTGGA	67430409	False	NA	19	True	AATAAA	-25	NA	67430437	67437553	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_67430665_67435627_67435841_67435956_67436143_67436248_67436387_67436587
transcript_76642.known	chr16	+	1896	5	FSM	ENSG00000176387.7	ENST00000326152.6	1896	5	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	22.6867251933813	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGCAGGTGCTGTTTGGA	67430685	True	NA	19	True	AATAAA	-25	NA	67431120	67437553	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67431514_67435627_67435841_67435956_67436143_67436248_67436387_67436587
transcript_76643.nnic	chr16	+	1873	5	NNC	ENSG00000176387.7	novel	1896	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	74.5297759288192	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGCAGGTGCTGTTTGGA	67430685	True	NA	19	True	AATAAA	-25	NA	67431120	67437553	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_67431514_67435650_67435841_67435956_67436143_67436248_67436387_67436587
transcript_76648.known	chr16	-	1262	9	FSM	ENSG00000159720.13	ENST00000540149.5	1262	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	176.84204640017	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGCGTGTGTGTGCGTGTG	-67475018	True	NA	NA	False	NA	NA	NA	67481117	67438475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67438690_67438792_67438871_67438970_67439148_67439273_67439352_67443098_67443179_67444527_67444707_67452237_67452361_67453543_67453716_67480956
transcript_76651.known	chr16	-	1636	8	FSM	ENSG00000159720.13	ENST00000290949.8	1636	8	0	0	0	0	multi-exon	TRUE	canonical	3	371	junction_6	22.2435498561736	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTGCTGTCTCGTTTAG	-67475058	True	NA	-5	True	AATAAA	-21	NA	67481157	67438018	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67438690_67438792_67438871_67438970_67439148_67439273_67439352_67443098_67443179_67444527_67444707_67453543_67453716_67480956
transcript_76655.known	chr16	-	905	6	FSM	ENSG00000159720.13	ENST00000565835.5	905	6	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_5	159.900719197882	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACCAAGGATGGACGAAGA	-67474980	True	NA	NA	False	GGGGCT	-13	NA	67481079	67438320	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67438690_67438792_67438871_67438970_67439148_67439273_67439352_67443098_67443179_67480956
transcript_76657.known	chr16	+	696	2	FSM	ENSG00000270049.4	ENST00000602596.1	696	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGCATGCCTGTAGTAG	67481335	True	NA	NA	False	AATAAA	-17	NA	67481383	67484669	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67481520_67484109
transcript_7666.nnic	chr1	+	660	9	NIC	ENSG00000171960.12	novel	754	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_5	145.680247030955	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTTTTTTTTCTTTTGG	42647832	True	NA	17	True	AATAAA	-17	NA	42658422	42676757	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_42658513_42658843_42658909_42659227_42659252_42659521_42659567_42660861_42660905_42665979_42666068_42666546_42666588_42667350_42667441_42676583
transcript_76662.known	chr16	+	3706	12	FSM	ENSG00000102974.16	ENST00000646771.1	3706	12	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_11	117.563417034354	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGTACAGCTAATAAATC	67553659	True	NA	-26	True	AATAAA	-39	NA	67562588	67639138	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67562725_67571147_67571265_67610823_67611614_67611950_67612122_67616744_67616879_67620696_67620818_67621441_67621592_67626554_67626716_67628369_67628553_67629397_67629534_67636689_67636852_67637693
transcript_76667.nic	chr16	+	2233	10	ISM	ENSG00000102974.16	ENST00000264010.10	3814	12	-106	9679	-47	1588	5prime_fragment	FALSE	canonical	3	371	junction_1	46.2171471572838	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGCGCTCTAAGAAAGAAG	67562363	False	NA	NA	False	AGTAAA	-18	NA	67562419	67629498	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_67562725_67571147_67571265_67610823_67611614_67611950_67612122_67616744_67616879_67620696_67620818_67621441_67621592_67626554_67626716_67628369_67628553_67629397
transcript_76668.known	chr16	+	2797	10	FSM	ENSG00000102974.16	ENST00000401394.6	2797	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	140.882141443754	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGTGCTCCAAAGACTC	67553643	True	NA	4	True	AATAAA	-13	NA	67562572	67639168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67562725_67571147_67571265_67616744_67616879_67620696_67620818_67621441_67621592_67626554_67626716_67628369_67628553_67629397_67629534_67636689_67636852_67637687
transcript_76672.nic	chr16	+	1410	3	ISM	ENSG00000102974.16	ENST00000264010.10	3814	12	-459	27719	-400	137	5prime_fragment	FALSE	canonical	3	371	junction_1	23.5	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAAACTGCGTTATACAG	NA	False	NA	NA	False	AAGAAA	-9	NA	67562066	67611458	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_67562725_67571147_67571265_67610823
transcript_76673.nic	chr16	+	1360	3	ISM	ENSG00000102974.16	ENST00000264010.10	3814	12	-255	27565	-196	291	5prime_fragment	FALSE	canonical	3	371	junction_1	23.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAAACGAGTTTATCCAT	67562214	True	NA	NA	False	ATTAAA	-7	NA	67562270	67611612	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_67562725_67571147_67571265_67610823
transcript_76676.known	chr16	-	1408	12	FSM	ENSG00000102977.17	ENST00000602320.1	1408	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	144.042177018853	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTCATGCGGCAGGAGAG	-67656780	True	NA	-39	True	AATAAA	-3	NA	67660239	67657545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67657685_67657761_67657815_67657985_67658363_67658554_67658642_67658719_67658817_67658927_67659080_67659228_67659264_67659374_67659420_67659536_67659614_67659701_67659796_67659902_67660037_67660121
transcript_76680.known	chr16	-	2065	12	FSM	ENSG00000102977.17	ENST00000620338.4	2065	12	0	0	0	0	multi-exon	TRUE	canonical	3	332	junction_1	33.3850562897694	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGGGCCGCCGCCTCTTT	-67660536	False	NA	-6	True	AATAAA	-36	NA	67660815	67657512	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67657685_67657761_67657854_67657985_67658363_67658554_67658642_67658719_67658817_67658927_67659080_67659228_67659264_67659374_67659420_67659536_67659614_67659701_67659796_67659902_67660046_67660121
transcript_76689.nic	chr16	+	1560	10	ISM	ENSG00000159753.14	ENST00000334583.11	4462	38	7790	0	-31	0	3prime_fragment	TRUE	canonical	3	92	junction_7	21.1017523115329	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGTGTGGAGCGGTATC	67652231	True	NA	12	True	ATTAAA	-14	NA	67652933	67657569	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_67653255_67654148_67654250_67654331_67654693_67654777_67654901_67656030_67656068_67656227_67656300_67656423_67656646_67656800_67656882_67657238_67657317_67657405
transcript_7669.known	chr1	+	806	9	FSM	ENSG00000171960.12	ENST00000677356.1	806	9	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_2	28.5194560782635	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTTTTTTTTCTTTTGG	42658639	True	NA	17	True	AATAAA	-17	NA	42658700	42676757	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42658909_42659227_42659252_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350_42667441_42676583
transcript_76690.nic	chr16	+	1527	10	NIC	ENSG00000159753.14	novel	4462	38	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_7	36.4630711207319	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGTGTGGAGCGGTATC	67652231	True	NA	12	True	ATTAAA	-14	NA	67652933	67657569	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_67653255_67654148_67654250_67654331_67654693_67654777_67654901_67656030_67656068_67656227_67656300_67656423_67656646_67656833_67656882_67657238_67657317_67657405
transcript_76698.nic	chr16	+	1479	9	ISM	ENSG00000159753.14	ENST00000545661.5	4119	38	7687	-51	-31	0	3prime_fragment	FALSE	canonical	3	43	junction_7	34.1201919689793	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGTGTGGAGCGGTATC	67652231	True	NA	12	True	ATTAAA	-14	NA	67652933	67657569	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_67653255_67654148_67654250_67654331_67654693_67654777_67654901_67656030_67656068_67656227_67656300_67656423_67656646_67657238_67657317_67657405
transcript_76701.known	chr16	-	1858	9	FSM	ENSG00000102977.17	ENST00000602860.5	1858	9	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_1	22.4746384843005	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTTTTTTAATAAAATAAT	-67656822	True	NA	-56	True	NA	NA	NA	67660281	67657562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67657685_67657761_67657854_67657985_67658363_67658554_67658642_67658719_67658817_67658927_67659614_67659701_67659796_67659902_67660046_67660121
transcript_76718.known	chr16	+	1244	3	FSM	ENSG00000102981.10	ENST00000458121.7	1244	3	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_2	45	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATGGTCCTTGTGTGTCC	67659635	True	NA	12	True	ATTAAA	-18	NA	67660959	67662774	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67661102_67661454_67661678_67661895
transcript_76719.nnic	chr16	+	1308	3	NNC	ENSG00000102981.10	novel	1244	3	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	94	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCATGGTCCTTGTGTGTC	67659603	True	NA	11	True	ATTAAA	-17	NA	67660927	67662773	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_67661102_67661454_67661711_67661895
transcript_76720.known	chr16	+	1281	2	FSM	ENSG00000102981.10	ENST00000602727.1	1281	2	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCCCTCAGCCTGGGGAA	67661188	True	NA	-32	True	NA	NA	NA	67661231	67662730	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67661678_67661895
transcript_76721.known	chr16	-	1565	7	FSM	ENSG00000124074.12	ENST00000243878.9	1565	7	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_4	11.7815769553806	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTCCATAAGAGCTTT	-67666471	True	NA	0	True	ATTAAA	-17	NA	67666750	67662944	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67663322_67663419_67663557_67663656_67663821_67663936_67664063_67664995_67665169_67666070_67666266_67666357
transcript_76729.known	chr16	+	1314	4	FSM	ENSG00000159761.15	ENST00000445068.1	1314	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	4.54606056566195	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGATTCCCCAGATAG	67666593	True	NA	7	True	AATAAA	-20	NA	67666836	67668757	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67667073_67667226_67667526_67667877_67668099_67668199
transcript_76730.known	chr16	+	1266	4	FSM	ENSG00000159761.15	ENST00000403458.9	1266	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	4.98887651569859	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTGTGATTCCCCAGAT	67666570	True	NA	5	True	AATAAA	-18	NA	67666813	67668755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67667073_67667295_67667526_67667877_67668099_67668199
transcript_76733.nic	chr16	+	1367	3	ISM	ENSG00000159761.15	ENST00000403458.9	1266	4	0	0	0	0	intron_retention	FALSE	canonical	2	14	junction_2	4	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTGTGATTCCCCAGAT	67666570	True	NA	5	True	AATAAA	-18	NA	67666813	67668755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_67667073_67667295_67667526_67667877
transcript_76734.known	chr16	+	1719	2	FSM	ENSG00000159761.15	ENST00000459925.1	1719	2	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGATTCCCCAGATAG	67666572	True	NA	7	True	AATAAA	-20	NA	67666815	67668757	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67667073_67667295
transcript_76736.known	chr16	-	1991	3	FSM	ENSG00000141098.13	ENST00000602377.1	1991	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	45	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCATGTGGTTTTTGTTTG	-67718303	True	NA	1	True	AATAAA	-20	NA	67719339	67674530	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67676054_67685511_67685803_67719162
transcript_76737.known	chr16	-	2018	3	FSM	ENSG00000141098.13	ENST00000268797.12	2018	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	2.5	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACATGGCATGTGGTTTTT	-67718280	True	NA	-4	True	AATAAA	-15	NA	67719316	67674535	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67676054_67685456_67685803_67719162
transcript_76741.known	chr16	-	819	3	FSM	ENSG00000141098.13	ENST00000602855.2	819	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	45	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAACCCCAGGGTTCTTT	-67718294	True	NA	NA	False	AAGAAA	-2	NA	67719330	67683279	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67683585_67685456_67685803_67719162
transcript_76742.known	chr16	-	5507	2	FSM	ENSG00000141098.13	ENST00000602279.2	5507	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTATTCGTTTTGATT	-67718264	True	NA	NA	False	AATAAA	-23	NA	67719300	67680433	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67685803_67719162
transcript_76747.known	chr16	-	2029	3	FSM	ENSG00000141098.13	ENST00000602496.1	2029	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	45	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATTGAAGAGATTGAA	-67718288	True	NA	-31	True	AATAAA	-3	NA	67719324	67680748	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67681491_67684677_67685803_67719162
transcript_76750.known	chr16	-	5245	14	FSM	ENSG00000141084.12	ENST00000317506.8	5245	14	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_9	8.25194974271008	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATGTGTGTCTGGTCTCT	-67805668	True	NA	-3	True	ATTAAA	-18	NA	67806560	67723069	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67726559_67727326_67727439_67727750_67727897_67728389_67728512_67729279_67729485_67729679_67729829_67729937_67730047_67731471_67731585_67734857_67735043_67738012_67738036_67744287_67744456_67772033_67772087_67805427_67805540_67806301
transcript_76752.known	chr16	-	2374	14	FSM	ENSG00000141084.12	ENST00000602677.5	2374	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	17.1705679104351	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGATAGCTTATTATTTTC	-67805668	True	NA	NA	False	NA	NA	NA	67806560	67726030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67726559_67727326_67727439_67727750_67727897_67728389_67728602_67729279_67729485_67729679_67729829_67729937_67730047_67731471_67731585_67734857_67735043_67738012_67738036_67744287_67744456_67772033_67772087_67805427_67805540_67806301
transcript_76756.known	chr16	-	2232	13	FSM	ENSG00000141084.12	ENST00000448631.6	2232	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	22.7344269042936	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAACAAATGAGATTATA	-67805668	True	NA	NA	False	NA	NA	NA	67806560	67726004	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67726559_67727326_67727439_67727750_67727897_67728389_67728602_67729279_67729485_67729679_67729829_67729937_67730047_67731471_67731585_67734857_67735043_67738012_67738036_67772033_67772087_67805427_67805540_67806301
transcript_76769.known	chr16	+	2120	5	FSM	ENSG00000102898.12	ENST00000219169.9	2120	5	0	0	0	0	multi-exon	FALSE	canonical	3	1872	junction_1	350.150681849972	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTTTCTTTCTTCCAA	67832399	True	NA	23	True	AATAAA	-15	NA	67846932	67872567	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67846986_67865101_67865230_67868339_67868412_67868500_67868600_67870799
transcript_7677.known	chr1	+	2979	8	FSM	ENSG00000065978.19	ENST00000321358.12	2979	8	0	0	0	0	multi-exon	FALSE	canonical	3	3018	junction_1	434.176631037157	5976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTCTGACTTGTGGTT	42538861	True	NA	NA	False	ATTAAA	-17	NA	42682417	42703805	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42682732_42683402_42683467_42693489_42693524_42696198_42696289_42696641_42696945_42697179_42697263_42700780_42701047_42701980
transcript_76771.known	chr16	+	1119	5	FSM	ENSG00000102898.12	ENST00000569436.6	1119	5	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	1064.80338560694	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTTAATTAGTTTACTA	67847041	False	NA	27	True	AATAAA	-29	NA	67847160	67871323	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67847457_67865101_67865230_67868339_67868412_67868500_67868600_67870799
transcript_76773.known	chr16	+	1179	5	FSM	ENSG00000102898.12	ENST00000568396.2	1179	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1137.75107119264	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTTAATTAGTTTACTA	67847158	False	NA	27	True	AATAAA	-29	NA	67847210	67871323	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67847567_67865101_67865230_67868339_67868412_67868500_67868600_67870799
transcript_76776.known	chr16	+	1876	1	FSM	ENSG00000168286.3	ENST00000303596.3	1876	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	965	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGTCTCGCCATTTTAT	67838489	True	NA	12	True	ATTAAA	-19	NA	67842319	67844195	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67842300_67844200
transcript_76777.known	chr16	-	2133	12	FSM	ENSG00000102901.13	ENST00000565157.5	2133	12	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_5	60.6615049419167	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTGCATTTTGGTGC	-67824820	True	NA	-2	True	AATAAA	-14	NA	67833897	67828158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67828391_67828473_67828579_67828666_67828844_67829422_67829517_67829764_67830549_67831215_67831359_67831575_67831613_67831753_67831891_67832011_67832109_67832227_67832316_67832454_67832546_67833749
transcript_76778.known	chr16	-	2957	10	FSM	ENSG00000102901.13	ENST00000569862.5	2957	10	0	0	0	0	multi-exon	TRUE	canonical	3	377	junction_9	28.2055944017416	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGCATTTTGGTGCAT	-67824836	True	NA	0	True	AATAAA	-16	NA	67833913	67828156	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67828391_67828473_67828579_67828666_67828844_67829422_67829517_67829764_67831359_67831575_67831613_67831753_67831891_67832011_67832109_67832227_67832546_67833749
transcript_76779.known	chr16	-	1737	12	FSM	ENSG00000102901.13	ENST00000626059.2	1737	12	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_10	138.556847539196	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGAATATTCTGCATTT	-67824819	True	NA	-8	True	AATAAA	-8	NA	67833896	67828164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67828391_67828473_67828579_67828666_67828844_67829422_67829517_67829764_67830089_67830389_67830549_67831215_67831359_67831575_67831613_67831753_67831891_67832011_67832109_67832454_67832546_67833749
transcript_76780.known	chr16	-	1990	11	FSM	ENSG00000102901.13	ENST00000436104.6	1990	11	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_6	164.758034705443	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTGCATTTTGGTGC	-67824820	True	NA	-2	True	AATAAA	-14	NA	67833897	67828158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67828391_67828473_67828560_67828666_67828844_67829422_67829517_67829764_67830549_67831215_67831359_67831840_67831891_67832011_67832109_67832227_67832316_67832454_67832546_67833749
transcript_76781.known	chr16	-	1931	12	FSM	ENSG00000102901.13	ENST00000563885.5	1931	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	127.129399815781	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAGCATCAATAAAGTGTC	-67824803	True	NA	-30	True	NA	NA	NA	67833880	67828186	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67828391_67828473_67828579_67828666_67828844_67829422_67829517_67829921_67830549_67831215_67831359_67831575_67831613_67831753_67831891_67832011_67832109_67832227_67832316_67832454_67832546_67833749
transcript_76790.known	chr16	+	4767	29	FSM	ENSG00000038358.15	ENST00000358933.10	4767	29	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_5	42.7444351312996	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTATGTGTGTGCTTTT	67862642	True	NA	17	True	AATAAA	-2	NA	67873051	67884499	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67873344_67875944_67876102_67876487_67876600_67876872_67876973_67877216_67877407_67877508_67877657_67877740_67877846_67878165_67878276_67878359_67878444_67878535_67878632_67878736_67878840_67878956_67879138_67879236_67879310_67879411_67879504_67879586_67879775_67879849_67879972_67880062_67880217_67880556_67880991_67881075_67881181_67881264_67881418_67881496_67881534_67881667_67881846_67881953_67882110_67882211_67882328_67882428_67882595_67882678_67882866_67882957_67883178_67883567_67883732_67883955
transcript_76799.nic	chr16	+	4881	28	NIC	ENSG00000038358.15	novel	4767	29	NA	NA	-6	0	intron_retention	FALSE	canonical	3	320	junction_5	41.7202453872394	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTATGTGTGTGCTTTT	67862636	True	NA	17	True	AATAAA	-2	NA	67873045	67884499	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_67873344_67875944_67876102_67876487_67876600_67876872_67876973_67877216_67877407_67877508_67877657_67877740_67877846_67878165_67878276_67878359_67878444_67878535_67878632_67878736_67878840_67878956_67879138_67879236_67879310_67879411_67879504_67879586_67879775_67879849_67879972_67880062_67880217_67880556_67880991_67881075_67881181_67881264_67881418_67881496_67881534_67881667_67882110_67882211_67882328_67882428_67882595_67882678_67882866_67882957_67883178_67883567_67883732_67883955
transcript_7682.nic	chr1	+	945	7	ISM	ENSG00000065978.19	ENST00000321358.12	2979	8	0	2968	0	-1512	5prime_fragment	FALSE	canonical	3	3018	junction_1	330.159767721966	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAGGAGATGAGACCCAAG	42538861	True	NA	NA	False	GATAAA	-6	NA	42682417	42700837	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_42682732_42683402_42683467_42693489_42693524_42696198_42696289_42696641_42696945_42697179_42697263_42700780
transcript_7683.nic	chr1	+	1157	7	ISM	ENSG00000065978.19	ENST00000321358.12	2979	8	-3	2759	-3	-1303	5prime_fragment	FALSE	canonical	3	3018	junction_1	330.159767721966	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCAAGCTTGGATGGCC	42538858	True	NA	NA	False	AGTAAA	-31	NA	42682414	42701046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_42682732_42683402_42683467_42693489_42693524_42696198_42696289_42696641_42696945_42697179_42697263_42700780
transcript_76832.known	chr16	+	626	3	FSM	ENSG00000188038.8	ENST00000339176.8	626	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	14.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGCTCCTTCCTTTCTCC	67884151	True	NA	28	True	ATTAAA	-17	NA	67884884	67886368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67884983_67885721_67885855_67885973
transcript_76834.nnic	chr16	+	607	3	NNC	ENSG00000188038.8	novel	626	3	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	43.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGCTCCTTCCTTTCTCC	67884149	True	NA	28	True	ATTAAA	-17	NA	67884882	67886368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_67884983_67885742_67885855_67885973
transcript_76841.known	chr16	-	977	8	FSM	ENSG00000205220.12	ENST00000358514.9	977	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_7	355.400722381635	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATGGCTGTGTCATTCTT	-67936840	False	NA	NA	False	AATAAA	-20	NA	67936850	67934505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67934672_67934796_67934949_67935419_67935479_67935581_67935698_67935962_67936104_67936214_67936313_67936397_67936486_67936693
transcript_76845.nic	chr16	-	678	4	ISM	ENSG00000261884.2	ENST00000573493.1	573	5	-117	3581	-117	-3581	5prime_fragment	FALSE	canonical	3	86	junction_2	309.483799611906	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATGGCTGTGTCATTCTT	-67928298	True	NA	NA	False	AATAAA	-20	NA	67935758	67934505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_67934672_67934796_67934949_67935295_67935479_67935581
transcript_76846.known	chr16	-	591	4	FSM	ENSG00000205220.12	ENST00000570985.1	591	4	0	0	0	0	multi-exon	FALSE	canonical	3	723	junction_2	15.1730755689881	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATGGCTGTGTCATTCTT	-67935785	False	NA	NA	False	AATAAA	-20	NA	67935795	67934505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67934672_67934796_67934949_67935419_67935479_67935581
transcript_76847.known	chr16	+	3497	3	FSM	ENSG00000159792.10	ENST00000291041.6	3497	3	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	1.5	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTCTGGCTTCTTGCTGT	67890205	True	NA	25	True	AGTAAA	-39	NA	67893253	67929676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67893372_67908679_67909707_67927324
transcript_76848.known	chr16	+	1509	2	FSM	ENSG00000159792.10	ENST00000570631.5	1509	2	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTCTTTTTGTTTTGTTT	67890223	True	NA	NA	False	NA	NA	NA	67893271	67910088	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67893372_67908679
transcript_76849.known	chr16	+	185	2	FSM	ENSG00000159792.10	ENST00000575198.1	185	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTGGTTTTGCTTTG	67890252	True	NA	4	True	AATAAA	-17	NA	67893300	67903145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_67893372_67903031
transcript_76865.known	chr16	-	3627	24	FSM	ENSG00000124067.17	ENST00000541864.6	3627	24	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_23	50.027213766132	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGAAGGGTAGCCAGGGA	-67966526	False	NA	NA	False	NA	NA	NA	67966878	67944481	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67944932_67945086_67945221_67945368_67945554_67945763_67945872_67945950_67946083_67946170_67946341_67946437_67946634_67946936_67947106_67947330_67947436_67947668_67947789_67948060_67948160_67949799_67949919_67950318_67950494_67950653_67950712_67950961_67951061_67951139_67951305_67951822_67952038_67952183_67952426_67954642_67954774_67957741_67957797_67957897_67958045_67961574_67961707_67963464_67963560_67966752
transcript_76866.known	chr16	-	4708	24	FSM	ENSG00000124067.17	ENST00000316341.8	4708	24	0	0	0	0	multi-exon	TRUE	canonical	3	184	junction_12	28.6291720034482	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGCTCTGCAGAGGCAG	-67966472	True	NA	NA	False	AATAAA	-17	NA	67968637	67943473	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67944932_67945086_67945221_67945368_67945554_67945763_67945872_67945950_67946083_67946170_67946341_67946437_67946634_67946936_67947106_67947330_67947436_67947668_67947789_67948060_67948160_67949799_67949919_67950318_67950494_67950653_67950712_67950961_67951061_67951139_67951305_67951822_67952038_67952183_67952426_67954642_67954774_67957741_67957797_67957897_67958045_67961574_67961707_67963464_67963560_67968438
transcript_76874.known	chr16	-	3620	23	FSM	ENSG00000124067.17	ENST00000572037.5	3620	23	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_22	57.624102509997	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCAGGGCCCCCCACCAAG	-67966419	True	NA	-101	True	NA	NA	NA	67968584	67944413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67944932_67945086_67945221_67945368_67945554_67945763_67945872_67945950_67946083_67946170_67946341_67946437_67946634_67946936_67947106_67947330_67947436_67947668_67947789_67948060_67948160_67949799_67949919_67950318_67950494_67950653_67950712_67950961_67951061_67951139_67951305_67951822_67952038_67952183_67952426_67954642_67954774_67957741_67957797_67957897_67958045_67961574_67961707_67968438
transcript_7690.known	chr1	+	1524	7	FSM	ENSG00000065978.19	ENST00000436427.1	1524	7	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	1439.18896913814	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTGTGTAAATTTGTC	42681531	True	NA	-7	True	AATAAA	-14	NA	42682986	42702349	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42683366_42693489_42693524_42696198_42696289_42696641_42696945_42697179_42697263_42700780_42701047_42701980
transcript_76903.known	chr16	-	673	5	FSM	ENSG00000124067.17	ENST00000576462.1	673	5	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_4	26.6774717692663	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAAAAAAGGGCA	-67968117	False	NA	NA	False	TATAAA	-11	NA	67968469	67957528	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67957797_67957897_67958045_67961574_67961707_67963464_67963560_67968438
transcript_76906.known	chr16	-	1737	10	FSM	ENSG00000141096.6	ENST00000672962.1	1737	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_8	3.57287448684745	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGGTGCACATGTCCTT	NA	False	NA	-1	True	AATAAA	-15	NA	67980549	67975663	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_67976002_67976092_67976229_67976699_67976776_67977269_67977355_67977652_67977830_67977937_67978008_67978266_67978409_67978496_67978627_67979638_67979766_67980093
transcript_76907.nic	chr16	-	2220	9	NIC	ENSG00000141096.6	novel	1737	10	NA	NA	-12	0	intron_retention	FALSE	canonical	3	22	junction_7	3.60555127546399	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGGTGCACATGTCCTT	NA	False	NA	-1	True	AATAAA	-15	NA	67980561	67975663	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_67976002_67976092_67976776_67977269_67977355_67977652_67977830_67977937_67978008_67978266_67978409_67978496_67978627_67979638_67979766_67980093
transcript_76909.known	chr16	+	6144	11	FSM	ENSG00000072736.19	ENST00000329524.8	6144	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_9	35.6691743666713	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTAATCTGTCTGAGTGT	68084143	False	NA	10	True	AATAAA	-20	NA	68085657	68229259	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68085785_68121986_68123122_68126447_68126611_68157868_68158069_68166842_68167016_68174373_68174515_68181474_68181531_68183239_68183367_68190767_68191776_68214328_68214433_68226349
transcript_76910.known	chr16	+	6328	11	FSM	ENSG00000072736.19	ENST00000349223.9	6328	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_9	35.6775839989201	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTTAATCTGTCTGAGTG	68083943	True	NA	9	True	AATAAA	-19	NA	68085457	68229258	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68085785_68121986_68123122_68126447_68126611_68157868_68158069_68166842_68167016_68174373_68174515_68181474_68181531_68183239_68183367_68190767_68191776_68221195_68221285_68226349
transcript_76913.known	chr16	+	6328	10	FSM	ENSG00000072736.19	ENST00000346183.8	6328	10	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	14.8282346626251	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTAATCTGTCTGAGTGT	68083855	True	NA	10	True	AATAAA	-20	NA	68085369	68229259	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68085785_68121986_68123122_68126447_68126611_68157868_68158069_68166842_68167016_68174373_68174515_68181474_68181531_68183239_68183367_68190767_68191776_68226349
transcript_76915.known	chr16	+	3555	10	FSM	ENSG00000072736.19	ENST00000569766.5	3555	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	32.1723752370735	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGCTTACTGCAGCCTTG	68084626	True	NA	NA	False	NA	NA	NA	68084750	68226471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68085181_68121986_68123122_68126447_68126611_68157868_68158069_68166842_68167016_68174373_68174515_68181474_68181531_68183239_68183367_68190767_68191776_68226349
transcript_76917.known	chr16	+	3583	9	FSM	ENSG00000072736.19	ENST00000379165.8	3583	9	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	15.2638257000006	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATATATATATATATAT	68084143	False	NA	NA	False	NA	NA	NA	68085657	68192228	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68085785_68121986_68123122_68126447_68126611_68157868_68158069_68166842_68167016_68174373_68174515_68181474_68181531_68183239_68183367_68190767
transcript_76926.known	chr16	+	1982	17	FSM	ENSG00000167264.18	ENST00000565263.6	1982	17	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	20.8172854858649	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTGTGTCCTGGCATG	68021330	True	NA	14	True	CATAAA	-1	NA	68023283	68079320	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68023352_68025414_68025495_68038005_68038150_68049504_68049551_68053563_68053656_68054573_68054618_68056363_68056425_68061065_68061114_68066316_68066383_68066565_68066637_68070133_68070221_68070939_68071109_68074033_68074156_68075354_68075505_68076631_68076720_68078444_68078519_68078748
transcript_76932.known	chr16	+	1933	16	FSM	ENSG00000167264.18	ENST00000358896.10	1933	16	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	27.0970273072322	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTGTGTCCTGGCATG	68021299	True	NA	14	True	CATAAA	-1	NA	68023252	68079320	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68023352_68038005_68038150_68049504_68049551_68053563_68053656_68054573_68054618_68056363_68056425_68061065_68061114_68066316_68066383_68066565_68066637_68070133_68070221_68070939_68071109_68074033_68074156_68075354_68075505_68076631_68076720_68078444_68078519_68078748
transcript_76943.known	chr16	-	3429	15	FSM	ENSG00000103067.14	ENST00000473183.7	3429	15	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_3	19.7397609728514	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGCCTTAAAGATCCAT	-68233152	True	NA	1	True	TATAAA	-25	NA	68236127	68229032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_68230316_68230388_68230555_68230840_68231028_68231177_68231377_68231481_68231695_68231801_68232104_68232245_68232289_68232370_68232504_68232576_68232688_68232760_68232816_68233326_68233426_68233767_68233883_68233993_68234108_68235633_68235763_68235847
transcript_76945.known	chr16	+	2694	6	FSM	ENSG00000103066.13	ENST00000219345.10	2694	6	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	7.39188744503053	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCCCTGGCCTACATTCT	68244908	True	NA	8	True	AATAAA	-20	NA	68245372	68261058	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68245554_68249289_68249447_68254918_68255038_68255281_68255381_68255765_68255991_68259145
transcript_76946.known	chr16	+	1203	6	FSM	ENSG00000103066.13	ENST00000566188.5	1203	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	26.4529771481397	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTGCTGTTGGCCTCTGG	68244908	True	NA	NA	False	NA	NA	NA	68245372	68259692	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68245554_68249289_68249447_68254918_68255038_68255281_68255381_68255890_68255991_68259145
transcript_76951.known	chr16	+	6255	11	FSM	ENSG00000103064.15	ENST00000219343.11	6255	11	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	22.4501670372405	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTCTCTCTTCTTTAAT	68262691	True	NA	3	True	AATAAA	-16	NA	68264525	68301819	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68264577_68266592_68266722_68274690_68275250_68287745_68287872_68290395_68290541_68291208_68291333_68291557_68291662_68294704_68294802_68296363_68296514_68296626_68296811_68297233
transcript_76957.nnic	chr16	+	3332	10	NIC	ENSG00000103064.15	novel	6255	11	NA	NA	-5	1577	intron_retention	FALSE	canonical	3	9	junction_1	33.7324256941281	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCATAGTTGCCCTGGGT	68262676	True	NA	6	True	AATAAA	-15	NA	68264510	68299010	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_68264577_68274690_68275250_68287745_68287872_68290395_68290541_68291208_68291333_68291557_68291662_68294704_68294802_68296363_68296514_68296626_68296811_68297233
transcript_76964.nic	chr16	+	1009	5	ISM	ENSG00000103064.15	ENST00000219343.11	6255	11	0	11280	0	-1039	5prime_fragment	TRUE	canonical	3	53	junction_2	20.4496332485451	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAAGATGGGATCACACT	68262691	True	NA	NA	False	AAGAAA	-16	NA	68264525	68290539	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_68264577_68266592_68266722_68274690_68275250_68287745_68287872_68290395
transcript_76965.known	chr16	-	4191	5	FSM	ENSG00000103061.13	ENST00000263997.11	4191	5	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	12.4096736459909	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTGCAGGTAAGACTCAA	-68308547	True	NA	NA	False	AGTAAA	-18	NA	68310946	68298033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_68301406_68302380_68302502_68304025_68304233_68310334_68310614_68310734
transcript_76973.nic	chr16	-	2179	4	NIC	ENSG00000103061.13	novel	4191	5	NA	NA	-7	972	intron_retention	FALSE	canonical	3	94	junction_2	10.8730042868667	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTTGAAAAAAGGAAGGTTT	-68308554	True	NA	NA	False	AAGAAA	-7	NA	68310953	68301027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_68302502_68304025_68304233_68310334_68310614_68310734
transcript_76974.known	chr16	-	910	3	FSM	ENSG00000103061.13	ENST00000568538.2	910	3	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	12	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGAGTGACAACAAAATCT	-68308423	True	NA	NA	False	GATAAA	-25	NA	68310822	68303689	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_68304233_68310334_68310614_68310734
transcript_76988.known	chr16	+	3738	19	FSM	ENSG00000132600.18	ENST00000441236.3	3738	19	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	67.7292403618998	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTAAATCTCAGCAAGTT	68306703	True	NA	20	True	ATTAAA	-19	NA	68311018	68358584	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68311100_68312041_68312177_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
transcript_76990.known	chr16	+	4238	19	FSM	ENSG00000132600.18	ENST00000339507.9	4238	19	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	74.7389902705854	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAGAAATTAAAAAAGTTT	68306818	True	NA	-11	True	AATACA	-9	NA	68311133	68358553	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68311746_68312041_68312177_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
transcript_76994.nic	chr16	+	2304	18	NIC	ENSG00000132600.18	novel	4531	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	137	junction_1	43.8194628985765	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGTGGCTCATGGCT	68306677	True	NA	5	True	AATAAA	-18	NA	68310992	68357259	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_68311100_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
transcript_77.known	SIRV1	+	464	3	FSM	SIRV1B	SIRV109	464	3	0	0	0	0	multi-exon	FALSE	canonical	3	3912	junction_2	265	1070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTTCGGCTAATCATGT	NA	False	NA	NA	False	NA	NA	NA	10711	11643	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV1_+_10792_10882_11058_11434
transcript_7701.known	chr1	+	776	5	FSM	ENSG00000065978.19	ENST00000332220.10	776	5	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	1431.7035962447	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGGTCCACGTAAACATG	42538883	True	NA	NA	False	NA	NA	NA	42682439	42697262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42682732_42683402_42683467_42693489_42693524_42696641_42696945_42697179
transcript_77011.known	chr16	+	2091	17	FSM	ENSG00000132600.18	ENST00000449359.7	2091	17	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	74.5125566179956	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGTGGCTCATGGCT	68306740	True	NA	5	True	AATAAA	-18	NA	68311055	68357259	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68311100_68315896_68316075_68321425_68321463_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
transcript_77018.nnic	chr16	+	2130	16	NIC	ENSG00000132600.18	novel	3738	19	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_10	71.7447946234119	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGTGGCTCATGGCT	68306719	True	NA	5	True	AATAAA	-18	NA	68311034	68357259	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_68311100_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
transcript_77021.nic	chr16	+	2216	16	FSM	ENSG00000132600.18	ENST00000691961.1	3416	16	-34	1234	1	0	multi-exon	FALSE	canonical	3	43	junction_1	86.9478515484361	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGTGGCTCATGGCT	68306678	True	NA	5	True	AATAAA	-18	NA	68310993	68357259	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68311100_68312041_68312177_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
transcript_77028.nic	chr16	+	2135	15	NIC	ENSG00000132600.18	novel	3416	16	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_10	68.2450940151954	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGTGGCTCATGGCT	NA	False	NA	5	True	AATAAA	-18	NA	68310939	68357259	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_68311100_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
transcript_77042.known	chr16	+	1723	11	FSM	ENSG00000132600.18	ENST00000565356.5	1723	11	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_10	74.9143510951006	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATATAAATTAAGCGT	68306748	True	NA	-22	True	NA	NA	NA	68311063	68352660	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68311100_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68352247
transcript_77046.known	chr16	-	5271	9	FSM	ENSG00000103056.12	ENST00000219334.10	5271	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGTGTTCTCCACTTAT	-68448469	True	NA	NA	False	AATAAA	-15	NA	68448508	68358326	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_68361308_68361602_68361760_68363495_68363560_68363776_68363867_68364750_68364907_68365016_68365093_68370858_68372388_68386597_68386660_68448352
transcript_77048.known	chr16	+	1062	2	FSM	ENSG00000287760.1	ENST00000666035.1	1062	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAGAAAA	68448798	True	NA	NA	False	NA	NA	NA	68448842	68450002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68449067_68449164
transcript_7705.known	chr1	-	1586	4	FSM	ENSG00000164007.11	ENST00000372539.3	1586	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	2.94392028877595	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGTATCATTCGGTCTG	-42740123	False	NA	0	True	NA	NA	NA	42740140	42734994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_42736031_42738228_42738314_42738420_42738586_42739840
transcript_77061.known	chr16	+	4636	5	FSM	ENSG00000184939.16	ENST00000570495.5	4636	5	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_1	13.1624465810882	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGAGTCAGTTTGTCGTTT	68539005	False	NA	12	True	AATAAA	-18	NA	68539212	68567131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68539470_68539757_68539826_68557997_68558125_68558472_68558569_68563043
transcript_77065.known	chr16	+	695	5	FSM	ENSG00000184939.16	ENST00000611381.4	695	5	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_4	15.9275704361965	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGCA	68538448	True	NA	NA	False	NA	NA	NA	68539315	68576040	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68539470_68539757_68539826_68557997_68558125_68558472_68558569_68575790
transcript_77066.known	chr16	+	648	5	FSM	ENSG00000184939.16	ENST00000576805.5	648	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	18.5067555233217	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGACTCCTGGGATGTTA	68538455	True	NA	NA	False	NA	NA	NA	68539322	68563137	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68539488_68539757_68539826_68557997_68558125_68558374_68558569_68563043
transcript_77067.known	chr16	+	543	5	FSM	ENSG00000184939.16	ENST00000573685.5	543	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	19.3955536141663	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATCCCACTGCACACATG	68538423	True	NA	NA	False	NA	NA	NA	68539290	68563098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68539488_68539757_68539826_68557997_68558125_68558472_68558569_68563043
transcript_77087.known	chr16	+	3611	16	FSM	ENSG00000062038.15	ENST00000429102.6	3611	16	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_15	221.825597160372	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTGCCTGGGGAGTGAA	68644982	False	NA	13	True	ATTAAA	-13	NA	68644992	68699036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68645425_68645635_68645751_68676384_68676471_68678133_68678278_68678500_68678657_68678761_68678907_68679798_68679975_68680967_68681097_68682301_68682488_68684582_68684825_68685204_68685351_68687511_68687737_68691719_68691927_68695254_68695386_68695776_68695924_68698092
transcript_77088.known	chr16	+	4452	16	FSM	ENSG00000062038.15	ENST00000264012.9	4452	16	0	0	0	0	multi-exon	FALSE	canonical	3	800	junction_9	56.7217771230768	1774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGACTAATTCTGTAAAG	68629439	True	NA	5	True	AATAAA	-16	NA	68645309	68700292	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68645425_68645635_68645751_68676384_68676471_68678133_68678278_68678500_68678657_68678761_68678907_68679798_68679975_68680967_68681097_68682301_68682488_68684582_68684825_68685204_68685351_68687511_68687737_68691719_68691927_68695254_68695386_68695776_68695924_68698190
transcript_77104.known	chr16	+	2746	15	FSM	ENSG00000062038.15	ENST00000542274.5	2746	15	0	0	0	0	multi-exon	TRUE	canonical	3	33	junction_1	221.08162912077	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGCCTGGGCCTGCTGT	68629430	True	NA	NA	False	NA	NA	NA	68645300	68698692	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68645425_68676384_68676471_68678133_68678278_68678500_68678657_68678761_68678907_68679798_68679975_68680967_68681097_68682301_68682488_68684582_68684825_68685204_68685351_68687511_68687737_68691719_68691927_68695254_68695386_68695776_68695924_68698190
transcript_77129.known	chr16	-	1682	2	FSM	ENSG00000260577.2	ENST00000562172.2	1682	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTTTGAAATTGGTCTG	-68646141	True	NA	-9	True	AATAAA	-19	NA	68646168	68644247	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_68645741_68645979
transcript_77137.known	chr16	+	4811	16	FSM	ENSG00000039068.20	ENST00000261769.10	4811	16	0	0	0	0	multi-exon	TRUE	canonical	3	975	junction_10	57.8682027445893	985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGTCAAATTTGTTTTA	68708067	True	NA	13	True	ATTAAA	-14	NA	68737291	68835537	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68737464_68738296_68738412_68801669_68801894_68808423_68808568_68808692_68808849_68810196_68810342_68811683_68811860_68812134_68812264_68813312_68813496_68815514_68815760_68819279_68819426_68822000_68822226_68823398_68823627_68828173_68828305_68829653_68829798_68833289
transcript_77142.known	chr16	+	4138	15	FSM	ENSG00000039068.20	ENST00000566612.5	4138	15	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_10	290.696112103063	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCTTTTGATGATGTC	68708087	True	NA	NA	False	NA	NA	NA	68737311	68835030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68737464_68738296_68738412_68801669_68801894_68808423_68808568_68808692_68808849_68810196_68810342_68811683_68811860_68812134_68812264_68813312_68813496_68815514_68815760_68822000_68822226_68823398_68823627_68828173_68828305_68829653_68829798_68833289
transcript_77160.known	chr16	+	4893	18	FSM	ENSG00000103047.8	ENST00000261778.2	4893	18	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	9.86307643773529	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGACTCCACGCAACCCAC	68841964	True	NA	14	True	AATAAA	-28	NA	68843530	69085182	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68843712_68859883_68860525_68862944_68863062_68867078_68867221_68875153_68875291_68878117_68878281_68880547_68880631_68900433_68900547_68902327_68902505_68907442_68907576_68909210_68909403_68919084_68919220_68927567_68928084_68930237_68930296_68974027_68974169_69022827_69022980_69040307_69040422_69083484
transcript_77168.known	chr16	+	1764	4	FSM	ENSG00000103047.8	ENST00000564180.1	1764	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	8.49836585598798	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACAAAAAAAAAAAAAAAAAT	68842037	True	NA	NA	False	NA	NA	NA	68843603	68867976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_68843712_68859883_68860525_68862944_68863062_68867078
transcript_77170.known	chr16	+	9789	7	FSM	ENSG00000168807.17	ENST00000336278.9	9754	7	-35	0	-18	0	multi-exon	FALSE	canonical	3	44	junction_1	8.31497978884428	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGGTTGTTTTTTTTTTC	NA	False	NA	3	True	AATAAA	-17	NA	69187128	69309052	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_69187747_69245601_69245816_69260049_69260261_69270142_69270286_69284047_69284245_69299589_69299775_69300831
transcript_77174.nnic	chr16	+	2117	17	NNC	ENSG00000141076.18	novel	2188	17	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	25	junction_16	235.078834848546	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTAGTCATTATAAATGT	69124562	True	NA	NA	False	AATAAA	-16	NA	69132596	69169021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_69132690_69133457_69133619_69136695_69136888_69137800_69137886_69139824_69139915_69143177_69143390_69150536_69150709_69150812_69150905_69153583_69153681_69154392_69154458_69155870_69155994_69157083_69157241_69160355_69160463_69163082_69163179_69165340_69165527_69167074_69167124_69168881
transcript_77175.known	chr16	+	2188	17	FSM	ENSG00000141076.18	ENST00000314423.12	2188	17	0	0	0	0	multi-exon	FALSE	canonical	3	787	junction_8	88.5465758442979	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTAGTCATTATAAATGT	69124614	True	NA	NA	False	AATAAA	-16	NA	69132648	69169021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_69132690_69133457_69133619_69136695_69136888_69137800_69137886_69139824_69139915_69143177_69143390_69150536_69150709_69150812_69150905_69153583_69153681_69154392_69154458_69155870_69155994_69157083_69157241_69160355_69160463_69163082_69163179_69165340_69165527_69167074_69167186_69168820
transcript_77181.known	chr16	+	2186	17	FSM	ENSG00000141076.18	ENST00000562237.5	2186	17	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	214.783893934694	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACTAGTCATTATAAATG	69124561	True	NA	NA	False	AATAAA	-15	NA	69132595	69169020	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_69132690_69133511_69133619_69136695_69136888_69137800_69137886_69139824_69139915_69143177_69143390_69150536_69150709_69150812_69150905_69153583_69153681_69154392_69154458_69155870_69155994_69157083_69157241_69160355_69160463_69163082_69163179_69165340_69165527_69167074_69167186_69168820
transcript_77199.known	chr16	+	1841	14	FSM	ENSG00000141076.18	ENST00000352319.8	1841	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	253.988328483647	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACTAGTCATTATAAATG	69124615	True	NA	NA	False	AATAAA	-15	NA	69132649	69169020	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_69132690_69133457_69133619_69136695_69136888_69137800_69137886_69139824_69139915_69143177_69143390_69150536_69150709_69150812_69150905_69153583_69153681_69160355_69160463_69163082_69163179_69165340_69165527_69167074_69167186_69168820
transcript_77200.nic	chr16	+	4321	5	NIC	ENSG00000103044.11	novel	900	4	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	34.2810078614967	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCGAAACTACTACTTTGT	69106173	False	NA	14	True	AATAAA	-22	NA	69106195	69117660	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_69106317_69106571_69106716_69109395_69110032_69113440_69113543_69114342
transcript_77206.known	chr16	+	4191	4	FSM	ENSG00000103044.11	ENST00000569188.6	4191	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	36.4447831962576	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCGAAACTACTACTTTGT	69104967	True	NA	14	True	AATAAA	-22	NA	69105652	69117660	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_69105788_69109395_69110032_69113440_69113543_69114342
transcript_77208.nic	chr16	+	4200	4	NIC	ENSG00000103044.11	novel	1163	4	NA	NA	-81	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	36.4447831962576	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCGAAACTACTACTTTGT	69106150	False	NA	14	True	AATAAA	-22	NA	69106172	69117660	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_69106317_69109395_69110032_69113440_69113543_69114342
transcript_7721.known	chr1	-	2591	15	FSM	ENSG00000117385.16	ENST00000296388.10	2591	15	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_8	39.6371295733726	1000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTTTGTTCAGACAATG	-42761777	True	NA	-21	True	AATAAA	-20	NA	42767028	42746373	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_42746853_42747271_42747413_42747722_42747799_42748199_42748318_42750185_42750337_42752273_42752370_42752536_42752665_42754868_42754991_42755164_42755218_42755547_42755638_42757782_42757923_42758851_42758984_42759200_42759391_42762322_42762476_42766506
transcript_77213.known	chr16	+	4220	4	FSM	ENSG00000103044.11	ENST00000306560.1	4220	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	45.8427263102398	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTACTTTGTATTTAATG	69107522	False	NA	22	True	AATAAA	-30	NA	69107539	69117668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_69107696_69109395_69110032_69113440_69113543_69114342
transcript_77214.known	chr16	-	1073	4	FSM	ENSG00000168802.14	ENST00000398235.6	1073	4	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_3	148.302243932975	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGGACCAAACCCCAATCT	-69132127	False	NA	NA	False	NA	NA	NA	69132146	69119810	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_69120650_69121052_69121171_69121435_69121494_69132088
transcript_77215.known	chr16	-	2921	4	FSM	ENSG00000168802.14	ENST00000448552.7	2921	4	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_2	69.5956575912287	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTGTCACTGTGTTTT	-69132569	False	NA	-10	True	AATAAA	-15	NA	69132588	69118009	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_69120650_69121052_69121171_69121435_69121494_69132483
transcript_77233.known	chr16	-	831	3	FSM	ENSG00000168802.14	ENST00000522497.1	831	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	245.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGCCAGGCCCAGGGCC	-69128674	True	NA	NA	False	NA	NA	NA	69132573	69120026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_69120650_69121052_69121171_69132483
transcript_77234.known	chr16	-	2761	3	FSM	ENSG00000286140.2	ENST00000306585.9	2761	3	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_2	61	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTGTCACTGTGTTTT	-69132132	False	3899	-10	True	AATAAA	-15	NA	69132151	69118009	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_69120650_69121435_69121494_69132088
transcript_77235.nic	chr16	-	2814	3	FSM	ENSG00000286140.2	ENST00000519520.7	2803	3	-11	0	-11	0	multi-exon	FALSE	canonical	3	295	junction_1	159.5	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTGTCACTGTGTTTT	-69132580	False	NA	-10	True	AATAAA	-15	NA	69132599	69118009	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_69120650_69121435_69121494_69132483
transcript_77236.known	chr16	-	863	3	FSM	ENSG00000168802.14	ENST00000522091.1	863	3	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_1	85	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCCATTATCACCAGCGT	-69128679	True	NA	NA	False	NA	NA	NA	69132578	69120460	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_69121171_69121435_69121494_69132483
transcript_77238.known	chr16	-	734	2	FSM	ENSG00000168802.14	ENST00000567763.1	734	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAACCCCAGGTTAGGG	-69128673	True	NA	NA	False	GGGGCT	-20	NA	69132572	69120004	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_69120650_69132483
transcript_77240.known	chr16	+	900	4	FSM	ENSG00000103044.11	ENST00000566118.5	900	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	28.4722086720835	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCTTCAACGTGGAGCGG	69106346	True	NA	NA	False	NA	NA	NA	69106608	69114397	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_69106716_69109395_69110032_69113440_69113543_69114342
transcript_77250.known	chr16	+	4106	11	FSM	ENSG00000132612.16	ENST00000254950.13	4106	11	0	0	0	0	multi-exon	FALSE	canonical	3	442	junction_6	31.3949040450835	2382	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGATGCCCACCACAAAAGC	69302743	True	NA	NA	False	AATAAA	-19	NA	69311349	69326939	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_69311533_69316007_69316120_69316224_69316373_69318649_69318712_69318822_69318943_69319386_69319544_69320140_69320290_69320687_69320770_69321050_69321271_69322559_69322701_69324207
transcript_77268.known	chr16	-	2996	10	FSM	ENSG00000132604.11	ENST00000254942.8	2996	10	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	52.8354071330351	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAAGTAGCTGTTTAATT	-69382654	True	NA	-7	True	ATTAAA	-17	NA	69386007	69355566	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_69357057_69357517_69357562_69361403_69361490_69366806_69367200_69368375_69368483_69370482_69370630_69372268_69372356_69384579_69384711_69385390_69385487_69385592
transcript_77295.known	chr16	-	4629	6	FSM	ENSG00000213380.16	ENST00000306875.10	4629	6	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_1	52.6269892735657	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAGTGAAGCTCTGCAGA	-69330212	True	NA	NA	False	AGTAAA	-39	NA	69339564	69326427	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_69329180_69330812_69331096_69332713_69332883_69334520_69335349_69336504_69336713_69339175
transcript_77296.known	chr16	+	2055	5	FSM	ENSG00000132603.15	ENST00000254940.10	2055	5	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_4	27.233940221716	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAACTTGATTGTGGCCTT	69334378	True	NA	17	True	AATAAA	-30	NA	69339771	69343106	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_69339886_69340005_69340093_69340193_69340333_69341179_69341321_69341532
transcript_7730.known	chr1	-	2726	14	FSM	ENSG00000117385.16	ENST00000460031.5	2726	14	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_9	32.05191794241	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTTTGTTCAGACAATG	-42761738	True	NA	-21	True	AATAAA	-20	NA	42766989	42746373	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_42746853_42747271_42747413_42747722_42747799_42748199_42748318_42750185_42750337_42752273_42752370_42752536_42752665_42754868_42755218_42755547_42755638_42757782_42757923_42758851_42758984_42759200_42759391_42762322_42762476_42766506
transcript_77303.known	chr16	+	1887	4	FSM	ENSG00000132603.15	ENST00000254941.6	1887	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	210.086225684175	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAAACTTGATTGTGGCC	69334403	True	NA	15	True	AATAAA	-28	NA	69339796	69343104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_69339886_69340005_69340093_69340193_69340333_69341532
transcript_77308.known	chr16	-	1731	4	FSM	ENSG00000213380.16	ENST00000562081.2	1731	4	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_3	7.36357401145817	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCATCACTCCAAAAAGATC	-69330231	True	NA	42	True	AGTAAA	-24	NA	69339583	69332595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_69332883_69334520_69335349_69336504_69336713_69339175
transcript_77310.known	chr16	+	1099	3	FSM	ENSG00000132603.15	ENST00000569637.6	1099	3	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_2	14	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAGTAGAGACAGTGTT	69339556	False	NA	NA	False	NA	NA	NA	69339567	69340887	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_69339886_69340005_69340093_69340193
transcript_7733.known	chr1	-	2993	14	FSM	ENSG00000117385.16	ENST00000236040.8	2993	14	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_7	39.2788543922409	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTTTGTTCAGACAAT	-42761761	True	NA	-22	True	AATAAA	-19	NA	42767012	42746374	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_42747413_42747722_42747799_42748199_42748318_42750185_42750337_42752273_42752370_42752536_42752665_42754868_42754991_42755164_42755218_42755547_42755638_42757782_42757923_42758851_42758984_42759200_42759391_42762322_42762476_42766506
transcript_77333.known	chr16	-	2859	2	FSM	ENSG00000258429.2	ENST00000288022.2	2859	2	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCAGTAAAATCTCTCCC	-69321236	False	9352	NA	False	AATAAA	-18	NA	69330588	69326912	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_69329180_69329996
transcript_77336.known	chr16	+	4262	5	FSM	ENSG00000103018.18	ENST00000307892.13	4262	5	0	0	0	0	multi-exon	FALSE	canonical	3	778	junction_2	22.7087538187369	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCCCCGACTACACTTAT	69406770	True	NA	25	True	AATAAA	-18	NA	69424618	69466264	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_69424858_69447149_69447279_69448114_69448145_69459092_69459122_69462429
transcript_77340.known	chr16	+	648	4	FSM	ENSG00000103018.18	ENST00000686167.1	2493	4	231	1614	169	-1614	multi-exon	FALSE	canonical	3	778	junction_2	25.7725090401036	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGGTTTATTTACAATA	69424838	False	NA	NA	False	NA	NA	NA	69424848	69459572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_69424858_69447149_69447279_69448114_69448145_69459092
transcript_77341.known	chr16	+	2492	3	FSM	ENSG00000103018.18	ENST00000514123.5	2492	3	0	0	0	0	multi-exon	FALSE	canonical	3	778	junction_2	26	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCCAAAAAACTATTGAGC	69406770	True	NA	NA	False	NA	NA	NA	69424618	69450238	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_69424858_69447149_69447279_69448114
transcript_77343.known	chr16	+	14219	16	FSM	ENSG00000102908.22	ENST00000426654.6	14219	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	5.87499408983154	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTTTGCAGTGGATAGC	NA	False	NA	0	True	AATAAA	-13	NA	69565093	69704650	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_69566375_69568494_69568549_69626402_69626529_69646516_69646579_69647027_69647587_69653235_69653429_69655608_69655800_69659726_69659900_69669976_69670112_69670235_69670289_69677202_69677336_69684886_69684971_69690939_69691089_69691748_69694240_69695135_69695380_69696359
transcript_77344.known	chr16	+	13289	15	FSM	ENSG00000102908.22	ENST00000349945.7	13289	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.20204041600946	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCAGTGGATAGCTGTC	69563457	True	NA	4	True	AATAAA	-17	NA	69565965	69704654	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_69566375_69568494_69568549_69626402_69626529_69647027_69647587_69653235_69653429_69655608_69655800_69659726_69659900_69669976_69670112_69670235_69670289_69677202_69677336_69684886_69684971_69690939_69691089_69691748_69694240_69695135_69695380_69696359
transcript_77346.known	chr16	+	13067	15	FSM	ENSG00000102908.22	ENST00000393742.7	13067	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	5.31123184143466	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGTCTTTTTTTTCCTC	69566174	False	NA	16	True	AATAAA	-29	NA	69566207	69704666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_69566375_69626402_69626529_69646516_69646579_69647027_69647587_69653235_69653429_69655608_69655800_69659726_69659900_69669976_69670112_69670235_69670289_69677202_69677336_69684886_69684971_69690939_69691089_69691748_69694240_69695135_69695380_69696359
transcript_77347.known	chr16	+	13229	14	FSM	ENSG00000102908.22	ENST00000354436.6	13229	14	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	4.17232357609865	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGTCTTTTTTTTCCTC	69563475	True	NA	16	True	AATAAA	-29	NA	69565983	69704666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_69566375_69626402_69626529_69647027_69647587_69653235_69653429_69655608_69655800_69659726_69659900_69669976_69670112_69670235_69670289_69677202_69677336_69684886_69684971_69690939_69691089_69691748_69694240_69695135_69695380_69696359
transcript_77355.known	chr16	-	2521	6	FSM	ENSG00000181019.13	ENST00000320623.10	2521	6	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_2	29.9492904757358	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATTGGTATCAGTGAAGC	-69721466	True	NA	0	True	AATAAA	-26	NA	69726560	69709400	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_69711282_69713027_69713130_69714963_69715078_69718122_69718254_69718369_69718535_69726432
transcript_77357.known	chr16	-	1105	5	FSM	ENSG00000181019.13	ENST00000379046.6	1105	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	118.113028493896	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTTCTTTAAAGGCA	-69721490	True	NA	NA	False	NA	NA	NA	69726584	69710726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_69711282_69713027_69713130_69718122_69718254_69718369_69718535_69726432
transcript_77358.known	chr16	-	2527	5	FSM	ENSG00000181019.13	ENST00000379047.7	2527	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	119.534513844329	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATTGGTATCAGTGAAGC	NA	False	NA	0	True	AATAAA	-26	NA	69726668	69709400	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_69711282_69714963_69715078_69718122_69718254_69718369_69718535_69726432
transcript_77364.known	chr16	-	1716	9	FSM	ENSG00000141101.13	ENST00000268802.10	1716	9	0	0	0	0	multi-exon	TRUE	canonical	3	491	junction_4	23.7983061372023	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTCTTTTCTTTTAAC	-69749202	True	NA	-17	True	AATAAA	-15	NA	69754926	69741870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_69742602_69744872_69745018_69748231_69748330_69748917_69749119_69749212_69749339_69749558_69749631_69752240_69752372_69754593_69754727_69754847
transcript_77367.nic	chr16	-	1601	8	NIC	ENSG00000141101.13	novel	1716	9	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_6	173.473282069132	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTCTTTTCTTTTAAC	-69749218	True	NA	-17	True	AATAAA	-15	NA	69754942	69741870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_69742602_69744872_69745018_69748231_69748330_69748917_69749119_69749212_69749339_69749558_69749631_69754593_69754727_69754847
transcript_77369.known	chr16	-	845	8	FSM	ENSG00000141101.13	ENST00000569871.5	845	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	227.016496748405	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATACGCCATCAACCCCC	-69749200	True	NA	NA	False	NA	NA	NA	69754924	69742575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_69742602_69744872_69745018_69748231_69748330_69748950_69749119_69749212_69749339_69749558_69749631_69754593_69754727_69754847
transcript_77372.nic	chr16	-	458	5	ISM	ENSG00000141101.13	ENST00000268802.10	1716	9	-14	7439	-14	0	5prime_fragment	FALSE	canonical	3	495	junction_3	25.6417628099162	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCAGCTTGTGAGCCTG	-69749216	True	NA	NA	False	AAAAAG	-2	NA	69754940	69749309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_69749339_69749558_69749631_69752240_69752372_69754593_69754727_69754847
transcript_77374.known	chr16	-	556	4	FSM	ENSG00000141101.13	ENST00000562416.1	556	4	0	0	0	0	multi-exon	FALSE	canonical	3	495	junction_3	28.9942523039768	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCAGCTTGTGAGCCTG	-69749193	True	NA	NA	False	AAAAAG	-2	NA	69754917	69749309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_69749339_69749558_69749631_69752240_69752372_69754593
transcript_77378.nic	chr16	+	4581	25	NIC	ENSG00000198373.13	novel	4487	24	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_2	40.6215383140521	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGGTGTTGTTGTGGAT	69757579	True	NA	23	True	AATAAA	-14	NA	69762290	69941739	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_69762392_69776188_69776242_69786995_69787081_69798681_69798830_69799173_69799296_69840125_69840264_69842023_69842121_69871803_69871932_69888038_69888250_69908760_69908851_69917708_69917884_69925429_69925485_69929447_69929530_69930129_69930259_69931151_69931228_69931508_69931581_69931801_69931891_69933969_69934130_69935852_69935987_69936311_69936453_69937117_69937239_69937547_69937653_69939026_69939124_69939340_69939414_69939840
transcript_77380.known	chr16	+	4487	24	FSM	ENSG00000198373.13	ENST00000359154.7	4487	24	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	24.1695335413575	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGGTGTTGTTGTGGAT	69757620	True	NA	23	True	AATAAA	-14	NA	69762331	69941739	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_69762392_69786995_69787081_69798681_69798830_69799173_69799296_69840125_69840264_69842023_69842121_69871803_69871932_69888038_69888250_69908760_69908851_69917708_69917884_69925429_69925485_69929447_69929530_69930129_69930259_69931151_69931228_69931508_69931581_69931801_69931891_69933969_69934130_69935852_69935987_69936311_69936453_69937117_69937239_69937547_69937653_69939026_69939124_69939340_69939414_69939840
transcript_77397.known	chr16	+	583	4	FSM	ENSG00000198373.13	ENST00000569658.1	583	4	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	41.2499158248299	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCTAGTAATGTGATGCA	69757650	True	NA	NA	False	NA	NA	NA	69762361	69799493	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_69762392_69786995_69787081_69798681_69798830_69799173
transcript_77407.known	chr16	-	2764	25	FSM	ENSG00000196696.13	ENST00000530079.5	2764	25	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_22	73.6969088564778	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCCACACTCCAAAAACAAA	-70064440	True	NA	NA	False	AAGAAA	-44	NA	70065853	69976351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_69976733_69978076_69978113_69978221_69978283_69982349_69982495_69982657_69982758_69986380_69986510_69990596_69990684_69996068_69996227_69996389_69996469_70010750_70010857_70011840_70011930_70014103_70014168_70018046_70018098_70021823_70021950_70023378_70023478_70023629_70023679_70024585_70024671_70030987_70031067_70031899_70031969_70034170_70034361_70036431_70036579_70038904_70039101_70042350_70042417_70042929_70043004_70065755
transcript_77416.known	chr16	-	1580	18	FSM	ENSG00000196696.13	ENST00000529089.1	1580	18	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_15	85.2076640963784	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCACAGTTCCTGTCCCAT	-70064405	True	NA	NA	False	NA	NA	NA	70065818	69996163	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_69996227_69996389_69996469_70010750_70010857_70011840_70011930_70014103_70014168_70018046_70018098_70021823_70021950_70023378_70023478_70023629_70023679_70024585_70024671_70030987_70031067_70031899_70031969_70034170_70034361_70036431_70036579_70038904_70038986_70042350_70042417_70042929_70043004_70065755
transcript_77421.known	chr16	+	8549	19	FSM	ENSG00000090857.14	ENST00000288050.9	8549	19	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	20.7021797623724	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCTGCTTGTGAAATGTTC	70110985	True	NA	14	True	AATAAA	-22	NA	70114331	70162537	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_70114441_70114820_70114931_70120460_70120720_70127259_70127394_70128783_70128866_70128958_70129123_70130422_70130545_70131301_70131420_70132150_70132301_70136193_70136387_70138898_70139024_70142233_70142390_70142552_70142687_70143509_70143659_70144420_70144534_70146133_70146229_70148463_70148554_70153390_70153574_70156474
transcript_77423.nic	chr16	+	3646	18	NIC	ENSG00000090857.14	novel	8549	19	NA	NA	-86	424	combination_of_known_junctions	FALSE	canonical	3	51	junction_8	9.19041173289147	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATATTGCCTTGTGTGTTG	70114199	True	NA	8	True	AGTAAA	-32	NA	70114245	70157658	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_70114441_70120460_70120720_70127259_70127394_70128783_70128866_70128958_70129123_70130422_70130545_70131301_70131420_70132150_70132301_70136193_70136387_70138898_70139024_70142233_70142390_70142552_70142687_70143509_70143659_70144420_70144534_70146133_70146229_70148463_70148554_70153390_70153574_70156474
transcript_77424.nic	chr16	+	4217	18	NIC	ENSG00000090857.14	novel	8549	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_8	9.19041173289147	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGGTTAGTAAAACTCT	70110985	True	NA	NA	False	AATAAA	-13	NA	70114331	70158315	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_70114441_70120460_70120720_70127259_70127394_70128783_70128866_70128958_70129123_70130422_70130545_70131301_70131420_70132150_70132301_70136193_70136387_70138898_70139024_70142233_70142390_70142552_70142687_70143509_70143659_70144420_70144534_70146133_70146229_70148463_70148554_70153390_70153574_70156474
transcript_77429.known	chr16	-	3572	22	FSM	ENSG00000090861.17	ENST00000565361.3	3572	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	359.593629297423	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTCCTGCTGGCTGCTGT	-70270574	True	NA	-32	True	AATAAA	-6	NA	70289557	70252306	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254390_70254484_70254620_70254735_70255727_70255837_70258032_70258218_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
transcript_77437.known	chr16	-	3441	21	FSM	ENSG00000090861.17	ENST00000676209.1	3441	21	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_10	274.128049458643	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGGCTGCTGTGGTG	-70270572	True	NA	-28	True	AATAAA	-10	NA	70289555	70252302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258032_70258218_70258979_70259187_70261043_70261158_70262345_70262485_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
transcript_77439.known	chr16	-	3389	21	FSM	ENSG00000090861.17	ENST00000675953.1	3389	21	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_17	276.600592009489	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGGCTGCTGTGGTG	-70270564	True	NA	-28	True	AATAAA	-10	NA	70289547	70252302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258032_70258218_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271889_70276485_70276632_70276965_70277155_70282619_70282785_70289420
transcript_7744.known	chr1	-	3001	2	FSM	ENSG00000117385.16	ENST00000492956.1	3001	2	0	0	0	0	multi-exon	FALSE	canonical	3	435	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTGCAAGAATCTGTCA	-42761766	True	NA	NA	False	NA	NA	NA	42767017	42759985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_42762476_42766506
transcript_77441.known	chr16	-	3489	21	FSM	ENSG00000090861.17	ENST00000676212.1	3489	21	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_5	275.761287166999	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTGCTGGCTGCTGTGG	-70270574	True	NA	-30	True	AATAAA	-8	NA	70289557	70252304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255719_70255837_70258032_70258218_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
transcript_77443.known	chr16	-	3717	21	FSM	ENSG00000090861.17	ENST00000674963.1	3717	21	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_20	268.487518331858	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCGCGCGTCTTTAAACAA	-70289569	False	NA	NA	False	NA	NA	NA	70289580	70251982	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258032_70258218_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289529
transcript_77444.known	chr16	-	3494	21	FSM	ENSG00000090861.17	ENST00000674691.1	3494	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	279.063662091645	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCCCAGAACCCAAAATTTT	-70289696	False	NA	5	True	AATAAA	-43	NA	70289707	70252269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258032_70258218_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289592
transcript_77446.known	chr16	-	3508	21	FSM	ENSG00000090861.17	ENST00000675045.1	3508	21	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	278.533350785862	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTGCTGGCTGCTGTGG	-70270574	True	NA	-30	True	AATAAA	-8	NA	70289557	70252304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258032_70258245_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
transcript_77448.known	chr16	-	3461	21	FSM	ENSG00000090861.17	ENST00000675035.1	3461	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	278.887970339346	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTGCTGGCTGCTGTGG	-70270574	True	NA	-30	True	AATAAA	-8	NA	70289557	70252304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258052_70258218_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
transcript_77449.known	chr16	-	3527	21	FSM	ENSG00000090861.17	ENST00000675853.1	3527	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	273.941398842891	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTCCTGCTGGCTGCTGT	-70270574	True	NA	-32	True	AATAAA	-6	NA	70289557	70252306	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70252907_70253267_70253382_70253665_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258032_70258218_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
transcript_77460.known	chr16	-	3544	21	FSM	ENSG00000090861.17	ENST00000676040.1	3544	21	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_15	278.831956561654	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGGCTGCTGTGGTG	-70270564	True	NA	-28	True	AATAAA	-10	NA	70289547	70252302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258032_70258218_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269835_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
transcript_77467.known	chr16	-	3328	20	FSM	ENSG00000090861.17	ENST00000676211.1	3328	20	0	0	0	0	multi-exon	FALSE	canonical	2	43	junction_15	277.024294663474	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGGCTGCTGTGGTG	-70270564	True	NA	-28	True	AATAAA	-10	NA	70289547	70252302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258032_70258218_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
transcript_77469.known	chr16	-	3296	20	FSM	ENSG00000090861.17	ENST00000676168.1	3296	20	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_6	266.787236131868	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTGCTGGCTGCTGTGG	-70270574	True	NA	-30	True	AATAAA	-8	NA	70289557	70252304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
transcript_7748.known	chr1	+	3440	12	FSM	ENSG00000164010.15	ENST00000372517.8	3440	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.96536480550911	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTGTTATTTTCATTGT	42816838	True	NA	21	True	AATAAA	-22	NA	42817121	42844991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42817254_42825622_42825739_42830443_42830534_42830767_42831116_42835037_42835155_42835731_42835765_42837157_42837191_42838900_42838922_42840032_42840054_42840151_42840179_42840269_42840297_42842516
transcript_77485.known	chr16	-	3790	20	FSM	ENSG00000090861.17	ENST00000676247.1	3790	20	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_9	275.649824024548	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGCTCCTGCTGGCTGC	-70289568	False	NA	-35	True	AATAAA	-3	NA	70289579	70252309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70252907_70253267_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258032_70258218_70258979_70259187_70261043_70261158_70262345_70262485_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
transcript_77486.known	chr16	-	3808	20	FSM	ENSG00000090861.17	ENST00000675986.1	3808	20	0	0	0	0	multi-exon	FALSE	canonical	3	1072	junction_15	91.5906526094741	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGCTCCTGCTGGCTGC	-70270574	True	NA	-35	True	AATAAA	-3	NA	70289557	70252309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70252907_70253267_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258032_70258218_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
transcript_77510.known	chr16	-	2545	15	FSM	ENSG00000090861.17	ENST00000564359.6	2545	15	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	277.540886857326	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATCACTAGGTCAAGAGT	-70270574	True	NA	NA	False	NA	NA	NA	70289557	70255441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70255837_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
transcript_77515.known	chr16	-	4243	20	FSM	ENSG00000090861.17	ENST00000675403.1	4243	20	0	0	0	0	multi-exon	FALSE	canonical	3	1072	junction_15	100.932082701981	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTGCTGGCTGCTGTGG	-70270574	True	NA	-30	True	AATAAA	-8	NA	70289557	70252304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258032_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
transcript_7752.known	chr1	+	4760	5	FSM	ENSG00000164008.17	ENST00000372525.7	4760	5	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	19.9624647776771	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCTTAGATGATGCTTGA	42765238	True	NA	NA	False	AATAAA	-23	NA	42767248	42779491	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42767391_42767508_42767625_42773562_42773650_42774736_42774869_42775208
transcript_77520.known	chr16	+	1765	12	FSM	ENSG00000157349.17	ENST00000563206.5	1765	12	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	169.773354020992	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGTTTCATCTTTTAAT	NA	False	NA	11	True	AATACA	-16	NA	70294776	70333823	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_70294918_70312608_70312658_70314901_70314956_70315968_70316105_70317495_70317589_70324584_70324688_70325573_70325689_70329291_70329470_70329830_70330069_70331721_70331885_70332967_70333160_70333520
transcript_77523.known	chr16	+	3275	12	FSM	ENSG00000157349.17	ENST00000288071.11	3275	12	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_1	131.601389125779	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCAGAGCAGACTCCCAC	70292672	True	NA	96	True	ATTAAA	-26	NA	70299185	70335305	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_70299355_70312608_70312658_70314901_70314956_70315968_70316105_70317495_70317589_70324584_70324688_70325573_70325689_70329291_70329470_70329830_70330069_70331721_70331885_70332967_70333160_70333520
transcript_77529.known	chr16	+	2923	12	FSM	ENSG00000168872.17	ENST00000302243.12	2923	12	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_4	117.286750394841	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGTGTGTATATAAAGTGA	70340812	True	NA	16	True	AATATA	-18	NA	70346902	70373383	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_70347049_70350556_70350606_70355484_70355536_70356111_70356248_70361417_70361511_70364542_70364646_70365016_70365132_70366084_70366263_70366623_70366862_70370222_70370386_70371371_70371564_70371924
transcript_77530.known	chr16	+	3067	12	FSM	ENSG00000168872.17	ENST00000569771.5	3067	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	168.68225300647	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCGTGTGTGTATATAAAGT	70340792	True	NA	14	True	AATATA	-16	NA	70346882	70373381	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_70347049_70350556_70350606_70355484_70355536_70356111_70356248_70361417_70361637_70364542_70364646_70365016_70365132_70366084_70366263_70366623_70366862_70370222_70370386_70371371_70371564_70371924
transcript_77539.known	chr16	+	1692	11	FSM	ENSG00000157349.17	ENST00000355992.7	1692	11	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	174.669087133356	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGTTTCATCTTTTAAT	70292680	True	NA	11	True	AATACA	-16	NA	70299193	70333823	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_70299355_70312608_70312658_70314901_70314956_70315968_70316105_70324584_70324688_70325573_70325689_70329291_70329470_70329830_70330069_70331721_70331885_70332967_70333160_70333520
transcript_77548.known	chr16	+	1703	11	FSM	ENSG00000168872.17	ENST00000417604.6	1703	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	174.179103224239	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATCGTGGAACCAGCTCC	70340853	True	NA	NA	False	NA	NA	NA	70346943	70372297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_70347049_70350556_70350606_70355484_70355536_70356111_70356248_70364542_70364646_70365016_70365132_70366084_70366263_70366623_70366862_70370222_70370386_70371371_70371564_70371924
transcript_77550.known	chr16	+	1717	10	FSM	ENSG00000157349.17	ENST00000393657.6	1717	10	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	178.773599840692	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTCATCTTTTAATTTG	70292648	True	NA	14	True	AATACA	-19	NA	70299161	70333826	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_70299355_70315968_70316105_70317495_70317589_70324584_70324688_70325573_70325689_70329291_70329470_70329830_70330069_70331721_70331885_70332967_70333160_70333520
transcript_77557.known	chr16	+	1790	9	FSM	ENSG00000157349.17	ENST00000562519.5	1790	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	223.095131053997	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATAGTGGTGGAAAGGG	70299124	False	NA	NA	False	NA	NA	NA	70299141	70333972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_70299355_70315968_70316105_70324584_70324688_70325573_70325689_70329291_70329470_70329830_70330069_70331721_70331885_70332967_70333160_70333520
transcript_77564.known	chr16	+	564	6	FSM	ENSG00000168872.17	ENST00000562509.5	564	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	176.83483819655	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTGCTGAACCGTGAGT	70340770	True	NA	NA	False	NA	NA	NA	70346860	70361496	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_70347049_70350556_70350606_70355484_70355536_70356111_70356248_70356845_70356907_70361417
transcript_77566.known	chr16	+	494	5	FSM	ENSG00000157349.17	ENST00000569099.6	494	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	131.139238979033	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTATGCCATGGGTTTCA	70294815	False	NA	NA	False	NA	NA	NA	70294832	70317516	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_70295067_70312608_70312658_70314901_70314956_70315968_70316105_70317495
transcript_77567.known	chr16	+	707	5	FSM	ENSG00000157349.17	ENST00000569224.1	707	5	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_1	13.2382022948737	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCGAAAGAGAAAAAGAGGAG	70292820	False	NA	NA	False	AAGAAA	-10	NA	70299333	70317942	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_70299355_70312608_70312658_70314901_70314956_70315968_70316105_70317495
transcript_77569.known	chr16	-	887	3	FSM	ENSG00000261777.6	ENST00000570278.1	887	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTAAATAATTTTTTTCT	-70346635	True	NA	NA	False	NA	NA	NA	70346747	70333782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70333961_70341939_70342100_70346198
transcript_77576.nic	chr16	-	4614	8	NIC	ENSG00000157350.13	novel	7920	7	NA	NA	30	1785	combination_of_known_junctions	FALSE	canonical	3	32	junction_7	91.8441448257618	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCAGGCGCAGTGGTGC	-70436230	True	NA	NA	False	AATACA	-5	NA	70439207	70379788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_70381863_70382804_70382925_70383189_70383236_70388366_70388547_70394981_70395176_70398191_70399534_70400695_70401095_70438948
transcript_7758.known	chr1	-	807	3	FSM	ENSG00000177868.12	ENST00000372521.9	807	3	0	0	0	0	multi-exon	FALSE	canonical	3	541	junction_2	23	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGCTCATACTTTAGCA	-42812249	True	NA	-35	True	AATAAA	-17	NA	42817397	42807051	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_42807501_42816430_42816581_42817189
transcript_77582.known	chr16	-	7920	7	FSM	ENSG00000157350.13	ENST00000342907.3	7920	7	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_6	28.0158685192676	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAGTACACTTAGGCCG	-70436123	True	NA	-10	True	AATAAA	-16	NA	70439100	70375976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70381863_70382804_70382925_70383189_70383236_70388366_70388547_70394981_70395176_70398191_70399534_70438948
transcript_77588.known	chr16	+	3907	24	FSM	ENSG00000157353.17	ENST00000288078.11	3907	24	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	5.8455224167855	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGTCCTCGTAAAGTCAC	70454364	True	NA	16	True	AATAAA	-18	NA	70454594	70480274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_70454631_70463168_70463273_70463622_70463775_70465125_70465177_70466131_70466258_70466881_70466955_70467373_70467472_70467885_70467967_70468848_70468969_70469151_70469324_70470313_70470427_70470970_70471073_70471181_70471353_70472540_70472606_70472982_70473354_70474128_70474340_70474527_70474695_70474789_70475012_70475349_70475494_70475647_70475768_70478271_70478460_70478550_70478651_70479179_70479404_70479578
transcript_7759.nnic	chr1	-	830	3	NNC	ENSG00000177868.12	novel	807	3	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_2	267.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGCTCATACTTTAGCA	-42812247	True	NA	-35	True	AATAAA	-17	NA	42817395	42807051	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_42807501_42816430_42816606_42817189
transcript_77598.known	chr16	-	3000	20	FSM	ENSG00000103051.20	ENST00000564415.6	3000	20	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_16	138.320716086257	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGTGCTGTTACCAGG	-70516981	True	NA	0	True	AATAAA	-19	NA	70523558	70480567	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70481145_70481358_70481488_70481763_70481866_70482091_70482176_70482728_70482822_70483852_70483970_70490329_70490393_70496265_70496432_70497220_70497388_70497936_70498056_70500957_70501092_70508405_70508465_70509230_70509389_70509915_70510022_70512238_70512433_70514334_70514510_70515867_70516041_70517625_70517741_70519648_70519732_70523372
transcript_77605.known	chr16	-	2820	19	FSM	ENSG00000103051.20	ENST00000323786.10	2820	19	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_11	30.0848594052241	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCAGTGTGCTGTTACC	-70516977	True	NA	-3	True	AATAAA	-16	NA	70523554	70480570	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70481145_70481358_70481488_70481763_70481866_70482091_70482176_70482728_70482822_70483852_70483970_70490329_70490393_70496265_70496432_70497220_70497388_70497936_70498056_70500957_70501092_70508405_70508465_70509230_70509389_70509915_70510022_70512238_70512433_70514334_70514510_70517625_70517741_70519648_70519732_70523372
transcript_77619.known	chr16	-	2761	18	FSM	ENSG00000103051.20	ENST00000674443.1	2761	18	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	110.994965439614	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGCCAGTGTGCTGTTA	-70516983	True	NA	-5	True	AATAAA	-14	NA	70523560	70480572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70481145_70481358_70481488_70481763_70481866_70482091_70482176_70482728_70482822_70483852_70483970_70496265_70496432_70497220_70497388_70497936_70498056_70500957_70501092_70508405_70508465_70509230_70509389_70509915_70510022_70512238_70512433_70514334_70514510_70517625_70517741_70519648_70519732_70523372
transcript_7762.known	chr1	-	708	3	FSM	ENSG00000177868.12	ENST00000497437.1	708	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	269	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCAGGTAGATGGTGTT	-42812104	True	NA	NA	False	NA	NA	NA	42817252	42813409	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_42813905_42816430_42816581_42817189
transcript_77638.known	chr16	+	9692	26	FSM	ENSG00000189091.13	ENST00000302516.10	9692	26	0	0	0	0	multi-exon	FALSE	canonical	3	1010	junction_16	115.377613079835	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGGCATTTCTTTTTCTT	70501743	True	NA	7	True	AATAAA	-18	NA	70523815	70577668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_70523929_70526586_70526727_70528872_70529200_70530744_70530918_70532478_70532621_70535307_70535421_70538322_70538461_70539103_70539208_70541668_70541835_70544437_70544534_70548369_70548443_70554445_70554598_70555050_70555207_70556178_70556335_70556885_70557030_70560468_70560592_70561629_70561785_70563875_70564051_70565064_70565271_70565367_70565525_70567410_70567537_70568282_70568496_70569042_70569142_70570005_70570150_70571094_70571200_70571672
transcript_7764.known	chr1	-	650	3	FSM	ENSG00000177868.12	ENST00000372522.5	650	3	0	0	0	0	multi-exon	TRUE	canonical	3	65	junction_2	261	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGCTCATACTTTAGCA	-42811656	False	NA	-35	True	AATAAA	-17	NA	42816804	42807051	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_42807501_42816430_42816581_42816753
transcript_7765.known	chr1	+	1935	5	FSM	ENSG00000164011.18	ENST00000372504.5	1935	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	16.5755844542508	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCCGTGTACTTATTTGG	42843438	True	NA	NA	False	AGTAAA	-16	NA	42846636	42852477	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42846658_42849290_42849414_42849564_42849743_42850658_42850744_42850949
transcript_7766.known	chr1	+	1859	4	FSM	ENSG00000164011.18	ENST00000372506.5	1859	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	3.2659863237109	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCCGTGTACTTATTTGG	42843429	True	NA	NA	False	AGTAAA	-16	NA	42846627	42852477	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42846658_42849290_42849414_42849564_42849743_42850949
transcript_77660.nnic	chr16	+	2102	7	NNC	ENSG00000157368.12	novel	1613	6	NA	NA	-27224	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	4.2687494916219	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTGCTTTGCATCTT	70619320	True	NA	36	True	ATTAAA	-18	NA	70619334	70660682	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_70619813_70646547_70646976_70654537_70654672_70656601_70656680_70656959_70657122_70659617_70659754_70659996
transcript_77663.known	chr16	+	1607	6	FSM	ENSG00000157368.12	ENST00000288098.7	1613	6	6	0	2	0	multi-exon	FALSE	canonical	3	17	junction_2	4.53431361950185	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTGCTTTGCATCTT	NA	False	NA	36	True	ATTAAA	-18	NA	70646564	70660682	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_70646976_70654537_70654672_70656601_70656680_70656959_70657122_70659617_70659754_70659996
transcript_77668.nic	chr16	-	3063	19	NIC	ENSG00000103043.15	novel	3096	19	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_4	74.2392902863586	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGAGCCGGCCTGCTCCTT	-70801177	False	NA	0	True	AATAAA	-22	NA	70801209	70687438	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_70688091_70692820_70692972_70695543_70695624_70697138_70697174_70698636_70698812_70731494_70731628_70744422_70744580_70762539_70762606_70762880_70763026_70772108_70772173_70780789_70780940_70781868_70782004_70783032_70783140_70783444_70783555_70784112_70784221_70784775_70784839_70785701_70785870_70786214_70786366_70800796
transcript_77671.known	chr16	-	3096	19	FSM	ENSG00000103043.15	ENST00000261776.10	3096	19	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_5	24.2653158964716	1213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGAGCCGGCCTGCTCCTT	-70791220	True	NA	0	True	AATAAA	-22	NA	70801158	70687438	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70688091_70692820_70692972_70695543_70695624_70697138_70697258_70698636_70698812_70731494_70731628_70744422_70744580_70762539_70762606_70762880_70763026_70772108_70772173_70780789_70780940_70781868_70782004_70783032_70783140_70783444_70783555_70784112_70784221_70784775_70784839_70785701_70785870_70786214_70786366_70800796
transcript_77678.known	chr16	-	2945	18	FSM	ENSG00000103043.15	ENST00000568548.5	2945	18	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_17	80.8863100636278	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCGAGCCGGCCTGCTCC	-70791222	True	NA	-2	True	AATAAA	-20	NA	70801160	70687440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70688091_70692820_70692972_70695543_70695624_70697138_70697258_70698636_70698812_70731494_70731628_70744422_70744580_70762539_70762606_70762880_70763026_70772108_70772173_70780789_70780940_70781868_70782004_70783032_70783140_70783444_70783555_70784112_70784221_70784775_70784839_70785701_70785870_70800796
transcript_7768.known	chr1	+	1683	3	FSM	ENSG00000164011.18	ENST00000372507.5	1683	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	1.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCCGTGTACTTATTTGG	42843427	True	NA	NA	False	AGTAAA	-16	NA	42846625	42852477	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42846658_42849290_42849414_42850949
transcript_77693.nic	chr16	-	2870	14	ISM	ENSG00000103043.15	ENST00000261776.10	3096	19	-51	43156	-49	680	5prime_fragment	FALSE	canonical	3	288	junction_10	22.6478051237438	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGGCCTCCCTCTGATG	-70801177	False	NA	NA	False	NA	NA	NA	70801209	70730594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_70731628_70744422_70744580_70762539_70762606_70762880_70763026_70772108_70772173_70780789_70780940_70781868_70782004_70783032_70783140_70783444_70783555_70784112_70784221_70784775_70784839_70785701_70785870_70786214_70786366_70800796
transcript_7770.known	chr1	+	1577	2	FSM	ENSG00000164011.18	ENST00000372508.7	1577	2	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCCGTGTACTTATTTGG	42843410	True	NA	NA	False	AGTAAA	-16	NA	42846608	42852477	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42846658_42850949
transcript_77713.known	chr16	-	3609	1	FSM	ENSG00000103043.15	ENST00000571759.1	3609	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCGAGCCGGCCTGCTCC	-70691030	False	NA	-2	True	AATAAA	-20	NA	70691049	70687440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_70687400_70691000
transcript_77714.nnic	chr16	-	4056	3	NIC	ENSG00000180917.18	novel	4875	3	NA	NA	-18	-914	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	18.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGATTTTGTGTTCATCT	-71288128	True	NA	-6	True	AATAAA	-11	NA	71289447	71282305	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_71285940_71288877_71288938_71289085
transcript_77715.known	chr16	-	4875	3	FSM	ENSG00000180917.18	ENST00000434935.7	4875	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	3.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTCCTTTGTAATCTGT	-71288083	True	NA	-4	True	ATTAAA	-15	NA	71289402	71281391	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_71285940_71288877_71288938_71289135
transcript_77718.known	chr16	+	1454	11	FSM	ENSG00000172137.19	ENST00000302628.9	1454	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	3.17647603485372	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAATCTTGTCTAGTGGTC	71358316	True	NA	8	True	AATAAA	-28	NA	71358722	71390433	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_71358887_71372152_71372230_71374744_71374835_71377666_71377748_71382718_71382776_71383366_71383445_71383969_71384026_71384338_71384379_71384782_71384837_71385576_71385649_71389748
transcript_77721.known	chr16	-	1790	10	FSM	ENSG00000260734.6	ENST00000561754.4	1790	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.05409255338946	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTTGGATATGTGTCCC	-71442019	True	NA	NA	False	AATAAA	-21	NA	71442054	71429979	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_71430367_71430667_71430742_71431120_71431275_71431420_71431563_71431760_71432003_71432109_71432326_71432664_71432724_71432869_71432893_71433013_71433421_71441968
transcript_77724.known	chr16	-	2612	5	FSM	ENSG00000157429.16	ENST00000565637.5	2612	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	4.63680924774785	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCTGTTTATTCAGTT	NA	False	NA	NA	False	ACTAAA	-22	NA	71489314	71474378	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_71476273_71478227_71478342_71478878_71479006_71484588_71484749_71488997
transcript_77726.known	chr16	-	2799	7	FSM	ENSG00000167377.19	ENST00000497160.5	2799	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.3365381652611	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATGAGTACATTTTTAAT	-71461310	True	NA	-2	True	AATAAA	-23	NA	71462246	71447596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_71449883_71450589_71450716_71453242_71453351_71454041_71454169_71456071_71456122_71456763_71456829_71462209
transcript_77733.known	chr16	-	3186	5	FSM	ENSG00000167377.19	ENST00000357254.8	3186	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	19.6643713349804	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATGAGTACATTTTTAAT	NA	False	NA	-2	True	AATAAA	-23	NA	71462759	71447596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_71449883_71453242_71453351_71454041_71454219_71456763_71456829_71462209
transcript_77736.known	chr16	-	2690	5	FSM	ENSG00000167377.19	ENST00000358700.7	2690	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	20.8731286586367	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATTTATTTAAAAAAGGAAA	-71455892	False	NA	-24	True	AATAAA	-1	NA	71456828	71447618	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_71449883_71450589_71450716_71453242_71453351_71454041_71454169_71456763
transcript_77737.known	chr16	+	230	3	FSM	ENSG00000247324.2	ENST00000567341.1	230	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAAGCTCCTACTCCTAC	71462302	True	NA	NA	False	AATAAA	-15	NA	71462326	71464067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_71462387_71463257_71463293_71463932
transcript_77738.known	chr16	-	2589	4	ISM	ENSG00000167377.19	ENST00000647773.2	2627	5	5419	0	0	0	3prime_fragment	FALSE	canonical	3	13	junction_3	16.8193010820572	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATGAGTACATTTTTAAT	-71455892	False	NA	-2	True	AATAAA	-23	NA	71456828	71447596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_71449886_71453242_71453351_71454041_71454169_71456763
transcript_77739.known	chr16	+	2412	3	FSM	ENSG00000140835.10	ENST00000338482.5	2412	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCCTTTCTTTCTTGTGT	NA	False	NA	NA	False	AATAGA	-13	NA	71525232	71538746	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_71525365_71526119_71526313_71536659
transcript_77742.known	chr16	+	2159	2	FSM	ENSG00000140835.10	ENST00000539698.4	2159	2	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTTCTTTCTTGTGTGA	71526314	False	NA	NA	False	AATAGA	-15	NA	71526425	71538748	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_71526496_71536659
transcript_77746.known	chr16	-	4812	19	FSM	ENSG00000040199.18	ENST00000567016.1	4812	19	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_18	5.44217639833709	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGAAATCACCTTATCTC	-71722208	True	NA	NA	False	NA	NA	NA	71723882	71648169	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_71650045_71652789_71653022_71655239_71655435_71656570_71656682_71658232_71658364_71658652_71658816_71663898_71664100_71667177_71667334_71669274_71669371_71672261_71672323_71676446_71676650_71678754_71678986_71679388_71679536_71681750_71681906_71684475_71684602_71690518_71690710_71702597_71702732_71714511_71714802_71723768
transcript_7775.known	chr1	-	3384	10	FSM	ENSG00000117394.24	ENST00000426263.10	3384	10	0	0	0	0	multi-exon	TRUE	canonical	3	759	junction_7	95.8297100764337	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGGAGAAGTTTGCTTTT	-42913904	True	NA	4	True	AATAAA	-41	NA	42958868	42925352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_42927242_42927604_42927809_42928931_42929034_42929209_42929315_42929592_42929781_42929872_42930036_42930625_42930867_42931045_42931207_42943225_42943322_42958633
transcript_77751.known	chr16	+	2914	3	FSM	ENSG00000140832.11	ENST00000268485.8	2914	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_2	33	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTCTCCTCAGTTTTTT	71619969	True	NA	6	True	AATAAA	-16	NA	71626183	71636465	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_71626697_71629366_71629495_71634192
transcript_77756.known	chr16	+	2214	3	FSM	ENSG00000140832.11	ENST00000299952.4	2214	3	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	41	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTACGTGTTTTATACCTA	71619972	True	NA	10	True	AATAAA	-20	NA	71626186	71641965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_71626697_71629366_71629495_71640389
transcript_77759.known	chr16	+	1351	3	FSM	ENSG00000140832.11	ENST00000565261.1	1351	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	34.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCACATAGCGAAACCCTG	71619969	True	NA	NA	False	NA	NA	NA	71626183	71641262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_71626534_71629366_71629495_71640389
transcript_7776.known	chr1	-	2398	9	FSM	ENSG00000117394.24	ENST00000630287.2	2398	9	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_5	314.397017121664	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTTGAAATGCTTGT	-42913884	True	NA	-10	True	TATAAA	-18	NA	42958848	42926155	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_42927242_42927604_42927809_42928931_42929034_42929209_42929315_42929592_42929781_42930625_42930867_42931045_42931207_42943225_42943322_42958633
transcript_77761.known	chr16	+	850	2	FSM	ENSG00000140832.11	ENST00000567566.1	850	2	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTAGATTTCCTGTG	71619946	True	NA	NA	False	AAAAAG	-17	NA	71626160	71629680	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_71626697_71629366
transcript_77763.known	chr16	-	3593	24	FSM	ENSG00000166747.13	ENST00000393512.7	3593	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	52.03143589563	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGATGGAGTTAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	71809201	71732384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_71733160_71734608_71734708_71738941_71739103_71739233_71739342_71745143_71745271_71745472_71745615_71746587_71746693_71748250_71748379_71749893_71749984_71750209_71750333_71753832_71753888_71756018_71756160_71758807_71758922_71761511_71761568_71764349_71764449_71764645_71764727_71765488_71765585_71767876_71767886_71769622_71769700_71771155_71771253_71773220_71773363_71774467_71774593_71789278_71789483_71808762
transcript_77766.known	chr16	-	6602	23	FSM	ENSG00000166747.13	ENST00000299980.9	6602	23	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_22	22.251984775437	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTCCTTGCTTCTTAC	-71806174	False	2660	-1	True	AATAAA	-25	NA	71808834	71728999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_71733160_71734608_71734708_71738941_71739103_71739233_71739342_71745143_71745271_71745472_71745615_71746587_71746693_71748250_71748379_71749893_71749984_71750209_71750333_71753832_71753888_71756018_71756160_71758807_71758922_71761511_71761568_71764349_71764449_71764645_71764727_71765488_71765585_71769622_71769700_71771155_71771253_71773220_71773363_71774467_71774593_71789278_71789483_71808762
transcript_7777.known	chr1	+	1124	4	FSM	ENSG00000227533.7	ENST00000431759.5	1124	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	3.85861230093008	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCTTAAGCTTTATTTT	42958633	True	NA	5	True	AATAAA	-17	NA	42959048	42983358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42959578_42970248_42970395_42973973_42974189_42983124
transcript_77780.known	chr16	+	4082	10	FSM	ENSG00000182149.21	ENST00000535424.5	4082	10	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	266.966081907213	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTTTTAGTATTTTTT	71894589	False	NA	7	True	AATAAA	-25	NA	71894718	71930639	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_71894859_71915625_71915729_71916461_71916643_71917046_71917135_71920738_71920823_71921342_71921454_71922473_71922681_71923287_71923381_71924768_71924818_71927613
transcript_77782.known	chr16	+	2356	10	FSM	ENSG00000182149.21	ENST00000329908.12	2356	10	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_8	266.27990471367	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTCTACTGTTTGGTCA	71891111	True	NA	23	True	AATAAA	-21	NA	71895542	71929010	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_71895590_71915625_71915729_71916461_71916643_71917046_71917135_71920738_71920823_71921342_71921454_71922473_71922681_71923287_71923381_71924772_71924818_71927613
transcript_7779.known	chr1	+	3075	3	FSM	ENSG00000227533.7	ENST00000416689.2	3106	3	31	0	4	0	multi-exon	FALSE	canonical	2	7	junction_2	4.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	42958688	True	NA	NA	False	NA	NA	NA	42959103	42976428	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_42959578_42970248_42970395_42973973
transcript_77799.nic	chr16	+	2462	9	NIC	ENSG00000182149.21	novel	4561	10	NA	NA	-133	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	290.945871254431	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAGCTGCTAATAAAGTTA	71895230	False	NA	-13	True	NA	NA	NA	71895359	71928974	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_71895590_71915625_71915729_71916461_71916643_71917046_71917135_71920738_71920823_71921342_71921454_71922473_71922681_71923287_71923385_71927613
transcript_77801.known	chr16	+	2255	9	FSM	ENSG00000182149.21	ENST00000378798.9	2255	9	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_7	261.558519981667	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTCTCTACTGTTTGGT	71891121	True	NA	21	True	AATAAA	-19	NA	71895552	71929008	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_71895590_71915625_71915729_71916461_71916643_71917046_71917135_71920738_71920823_71921342_71921454_71922473_71922681_71924768_71924818_71927613
transcript_77808.known	chr16	-	1187	9	FSM	ENSG00000102984.15	ENST00000563878.5	1187	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	22.6370824091799	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGATATTGCCTTTAGTC	-71883020	True	NA	NA	False	NA	NA	NA	71884158	71860597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_71860673_71861775_71861943_71864137_71864243_71864902_71865049_71867892_71868038_71879906_71880024_71881316_71881435_71883210_71883274_71883907
transcript_77811.known	chr16	-	1719	9	FSM	ENSG00000102984.15	ENST00000568666.5	1719	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	21.837110042311	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGCAGAACAGCAGCTCT	-71883020	True	NA	NA	False	NA	NA	NA	71884158	71860046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_71860673_71861775_71861943_71864137_71864243_71864902_71865049_71867911_71868038_71879906_71880024_71881316_71881435_71883210_71883274_71883907
transcript_7782.known	chr1	-	1503	10	FSM	ENSG00000117395.13	ENST00000431635.6	1503	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	430.719151715269	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTTGTCTCATCCTT	-43172530	True	NA	2	True	GATAAA	-25	NA	43172570	43164174	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_43164494_43164642_43164806_43166825_43166920_43167159_43167236_43168938_43169029_43170755_43170880_43171478_43171652_43171885_43171970_43172052_43172142_43172279
transcript_77825.nic	chr16	-	2094	8	NIC	ENSG00000102984.15	novel	1987	8	NA	NA	-66	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	22.1939502696439	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCCCTTTCTTGCTTTTC	NA	False	NA	-9	True	AATAAA	-16	NA	71884270	71859684	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_71860673_71861775_71861943_71864137_71864243_71864902_71865049_71867892_71868038_71879906_71880024_71883210_71883274_71883907
transcript_77827.known	chr16	-	1987	8	FSM	ENSG00000102984.15	ENST00000425432.6	1987	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	20.5555494269771	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCCCTTTCTTGCTTTTC	-71883044	True	NA	-9	True	AATAAA	-16	NA	71884182	71859684	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_71860673_71861775_71861943_71864137_71864243_71864902_71865049_71867911_71868038_71879906_71880024_71883210_71883274_71883907
transcript_77828.known	chr16	+	1125	7	FSM	ENSG00000182149.21	ENST00000538850.5	1125	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	313.173363419617	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGCTGGACAGTGGGAGA	71891116	True	NA	NA	False	NA	NA	NA	71895547	71928152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_71895590_71920738_71920823_71921342_71921454_71922473_71922681_71923287_71923381_71924768_71924818_71927613
transcript_77831.known	chr16	-	1748	7	FSM	ENSG00000102984.15	ENST00000564134.5	1748	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	23.2337159222445	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCACTGCCACAGGCTG	NA	False	NA	-100	True	NA	NA	NA	71884204	71859775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_71860673_71864137_71864236_71864898_71865049_71867911_71868038_71879906_71880024_71883210_71883274_71883907
transcript_77833.known	chr16	-	1032	7	FSM	ENSG00000102984.15	ENST00000562797.5	1032	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	25.2894356511875	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCAAGTGGGCTCTACGTC	-71883023	True	NA	NA	False	NA	NA	NA	71884161	71860492	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_71860673_71861775_71861943_71864137_71864243_71864902_71865049_71879906_71880024_71883210_71883274_71883907
transcript_77849.known	chr16	+	7896	3	FSM	ENSG00000224470.9	ENST00000427980.7	7896	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	1	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGGTGTTTGCGCCTTC	71841444	True	NA	19	True	TATAAA	-14	NA	71845975	71857328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_71846105_71848009_71848072_71849623
transcript_77857.known	chr16	+	4669	9	FSM	ENSG00000102967.12	ENST00000219240.9	4669	9	0	0	0	0	multi-exon	FALSE	canonical	2	180	junction_7	33.843158466668	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATTCTGTGACTTACTT	72006567	True	NA	5	True	AATATA	-14	NA	72008743	72027659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_72008786_72012049_72012263_72014472_72014673_72017023_72017107_72021123_72021312_72022361_72022476_72023164_72023319_72023473_72023634_72024144
transcript_7786.known	chr1	-	1352	9	FSM	ENSG00000117395.13	ENST00000236051.3	1352	9	0	0	0	0	multi-exon	FALSE	canonical	3	1286	junction_6	62.2670659337663	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTCTCATTTCCTTTGT	-43157459	True	NA	-7	True	GATAAA	-16	NA	43172290	43164183	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_43164494_43164642_43164806_43166825_43166920_43167159_43167236_43168938_43169029_43170755_43170880_43171478_43171652_43171885_43171970_43172052
transcript_77870.known	chr16	+	607	5	FSM	ENSG00000102967.12	ENST00000574309.5	607	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	100.641380654282	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGACTCAGGCAAGCCTTT	72006592	True	NA	NA	False	NA	NA	NA	72008768	72024238	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_72008786_72012049_72012263_72014472_72014673_72017023_72017107_72024144
transcript_77872.nic	chr16	+	4257	28	NIC	ENSG00000140829.12	novel	4323	27	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_27	48.1002040497712	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGCATGTCTGACTTTT	72090526	True	NA	19	True	AATAAA	-19	NA	72093814	72112909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_72094052_72096138_72096481_72096821_72097010_72097676_72097782_72098644_72098793_72098926_72099046_72099203_72099281_72099731_72099888_72100435_72100598_72101085_72101194_72101499_72101613_72103073_72103212_72103601_72103789_72103945_72104132_72104485_72104627_72105026_72105138_72105231_72105349_72105516_72105625_72106004_72106118_72107339_72107549_72107644_72107800_72108226_72108383_72108472_72108608_72108799_72108926_72109414_72109511_72110955_72111078_72112412_72112530_72112624
transcript_77873.nnic	chr16	+	4098	27	NNC	ENSG00000140829.12	novel	4323	27	NA	NA	-2	0	intron_retention	FALSE	non_canonical	0	0	junction_2	52.3111989774803	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATGACTGCATGTCTG	72090556	True	NA	13	True	AATAAA	-13	NA	72093844	72112903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_72094052_72096138_72096263_72096821_72097010_72097676_72097782_72098644_72098793_72098926_72099046_72099203_72099281_72099731_72099888_72100435_72100598_72101085_72101194_72101499_72101613_72103073_72103212_72103601_72103789_72103945_72104132_72104485_72104627_72105026_72105138_72105231_72105349_72105516_72105625_72106004_72106118_72107339_72107549_72107644_72107800_72108226_72108383_72108472_72108608_72108799_72108926_72109414_72109511_72110955_72111078_72112412
transcript_77874.known	chr16	+	4323	27	FSM	ENSG00000140829.12	ENST00000268482.8	4323	27	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	40.2464302507563	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCATGTCTGACTTTTTCC	72090558	True	NA	22	True	AATAAA	-22	NA	72093846	72112912	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_72094052_72096138_72096481_72096821_72097010_72097676_72097782_72098644_72098793_72098926_72099046_72099203_72099281_72099731_72099888_72100435_72100598_72101085_72101194_72101499_72101613_72103073_72103212_72103601_72103789_72103945_72104132_72104485_72104627_72105026_72105138_72105231_72105349_72105516_72105625_72106004_72106118_72107339_72107549_72107644_72107800_72108226_72108383_72108472_72108608_72108799_72108926_72109414_72109511_72110955_72111078_72112412
transcript_77879.nic	chr16	+	4714	26	NIC	ENSG00000140829.12	novel	4323	27	NA	NA	-46	0	intron_retention	FALSE	canonical	3	116	junction_1	40.0782434744838	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATGACTGCATGTCTG	72093774	False	NA	13	True	AATAAA	-13	NA	72093800	72112903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_72094052_72096138_72096481_72096821_72097010_72097676_72097782_72098644_72098793_72098926_72099046_72099203_72099281_72099731_72099888_72100435_72100598_72101085_72101194_72101499_72101613_72103073_72103212_72103601_72103789_72103945_72104627_72105026_72105138_72105231_72105349_72105516_72105625_72106004_72106118_72107339_72107549_72107644_72107800_72108226_72108383_72108472_72108608_72108799_72108926_72109414_72109511_72110955_72111078_72112412
transcript_77892.nnic	chr16	-	931	4	NNC	ENSG00000140830.9	novel	2521	4	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	27.1825107171668	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACTGTTAGTTGGGTTTT	-72093634	False	NA	-3	True	AATAAA	-17	NA	72093657	72084856	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_72085176_72088986_72089139_72090617_72090787_72093366
transcript_77893.known	chr16	-	2521	4	FSM	ENSG00000140830.9	ENST00000268483.8	2521	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	21.0765799460496	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACTGTTAGTTGGGTTTT	-72092251	True	NA	-3	True	AATAAA	-17	NA	72093620	72084856	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_72086803_72088986_72089139_72090617_72090787_72093366
transcript_77897.known	chr16	-	1984	6	FSM	ENSG00000261008.8	ENST00000659470.1	1984	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	7.6524505878836	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTAGTATCTCACGTTGC	-72663646	True	NA	-8	True	AATAAA	-27	NA	72665014	72521007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_72522624_72523331_72523416_72540577_72540612_72555264_72555327_72570450_72570516_72664891
transcript_7792.nnic	chr1	+	1779	4	NNC	ENSG00000179178.11	novel	1850	4	NA	NA	-289	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	91.3649580285328	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGGATCTCACCTCAGA	43269516	True	NA	28	True	AATAAA	-29	NA	43270656	43274002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_43270794_43271192_43271254_43272183_43272340_43272577
transcript_77921.known	chr16	+	1395	8	FSM	ENSG00000103035.11	ENST00000568717.1	1395	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	912.252225236518	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGTGAATGGAGACTGAT	74274110	True	NA	117	True	NA	NA	NA	74296819	74305888	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_74296989_74299575_74299746_74300114_74300207_74301051_74301145_74301554_74301653_74302211_74302293_74304302_74304395_74305288
transcript_77923.known	chr16	+	1631	7	FSM	ENSG00000103035.11	ENST00000219313.9	1631	7	0	0	0	0	multi-exon	FALSE	canonical	3	1751	junction_2	143.623350005028	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTCTAGTCGTTTTT	74274104	True	NA	21	True	ATTAAA	-16	NA	74296813	74306288	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_74296989_74300114_74300207_74301051_74301145_74301554_74301653_74302211_74302293_74304302_74304395_74305288
transcript_7793.nnic	chr1	+	2055	4	NNC	ENSG00000179178.11	novel	1850	4	NA	NA	-273	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	94.1358356607916	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGGATCTCACCTCAGA	43269532	True	NA	28	True	AATAAA	-29	NA	43270672	43274002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_43270794_43270900_43271254_43272183_43272340_43272577
transcript_77932.known	chr16	+	2365	1	FSM	ENSG00000261079.1	ENST00000563701.1	2365	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATCTGTCCCTGATTTCC	NA	False	NA	NA	False	AGTAAA	-17	NA	74367461	74369826	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_74367500_74369800
transcript_77933.known	chr16	+	931	6	FSM	ENSG00000103035.11	ENST00000568615.2	931	6	0	0	0	0	multi-exon	FALSE	canonical	3	1751	junction_2	157.319293158849	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGGTGTCCTTCTCAAC	74274119	True	NA	1	True	AATAAA	-18	NA	74296828	74304709	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_74296989_74300114_74300207_74301051_74301145_74301554_74301653_74302211_74302293_74304302
transcript_77936.known	chr16	-	8261	27	FSM	ENSG00000090863.12	ENST00000205061.9	8261	27	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	152.140958659314	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTCTGTGGTGACTGGG	-74594306	True	NA	-1	True	AATAAA	-27	NA	74607114	74447426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_74452132_74453170_74453335_74456648_74456756_74457873_74457995_74459681_74459790_74462093_74462196_74462487_74462631_74463355_74463480_74465675_74465814_74467755_74467849_74468945_74469064_74469984_74470074_74471172_74471287_74472348_74472412_74474545_74474633_74477395_74477534_74480240_74480395_74483022_74483125_74485795_74485918_74491000_74491216_74492956_74493141_74494759_74494832_74496440_74496645_74503530_74503747_74508838_74508926_74532120_74532154_74606656
transcript_7794.known	chr1	+	1850	4	FSM	ENSG00000179178.11	ENST00000432792.6	1850	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	93.9893611000735	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGGATCTCACCTCAGA	NA	False	NA	28	True	AATAAA	-29	NA	43270024	43274002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43270086_43270585_43270794_43272183_43272340_43272577
transcript_77944.known	chr16	-	9287	26	FSM	ENSG00000090863.12	ENST00000422840.7	9287	26	0	0	0	0	multi-exon	FALSE	canonical	3	755	junction_19	50.0039358450912	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTTGTTAAATCTTCTC	-74594306	True	NA	-14	True	AATAAA	-14	NA	74607114	74447439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_74453335_74456648_74456756_74457873_74457995_74459681_74459790_74462093_74462196_74462487_74462631_74463355_74463480_74465675_74465814_74467755_74467849_74468945_74469064_74469984_74470074_74471172_74471287_74472348_74472412_74474545_74474633_74477395_74477534_74480240_74480395_74483022_74483125_74485795_74485918_74491000_74491216_74492956_74493141_74494759_74494832_74496440_74496645_74503530_74503747_74508838_74508926_74532120_74532154_74606656
transcript_7796.nnic	chr1	+	2187	3	NNC	ENSG00000179178.11	novel	1850	4	NA	NA	-298	0	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_1	86	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGGATCTCACCTCAGA	43269507	True	NA	28	True	AATAAA	-29	NA	43270647	43274002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_43271254_43272183_43272340_43272577
transcript_77975.known	chr16	-	2918	21	FSM	ENSG00000090863.12	ENST00000567951.5	2918	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	193.791763240856	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATATAGTAACGCATCTC	-74594290	True	NA	NA	False	AAGAAA	-36	NA	74607098	74452789	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_74453335_74456648_74456756_74457873_74457995_74459681_74459790_74462093_74462196_74462487_74462631_74463355_74463480_74465675_74465814_74467755_74467849_74468945_74469064_74469984_74470074_74471172_74471287_74472348_74472412_74474545_74474633_74477395_74477534_74480240_74480275_74496628_74496645_74503530_74503747_74508838_74508926_74532120_74532154_74606656
transcript_77977.known	chr16	-	3626	26	FSM	ENSG00000090863.12	ENST00000447066.6	3626	26	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_25	221.153579215892	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACAAGCTCCTTTGTGCCT	-74594304	True	NA	-84	True	NA	NA	NA	74607112	74452026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_74452132_74453170_74453335_74456648_74456756_74457873_74457995_74459681_74459790_74462093_74462196_74462487_74462631_74463355_74463480_74465675_74465814_74467755_74467849_74468945_74469064_74469984_74470074_74471172_74471287_74472348_74472412_74474545_74474633_74477395_74477534_74480240_74480395_74483022_74483125_74485795_74485918_74491000_74491216_74492956_74493141_74494759_74494832_74496440_74496645_74503530_74503747_74508838_74508926_74606656
transcript_77978.nic	chr16	-	2598	19	ISM	ENSG00000090863.12	ENST00000422840.7	9287	26	-26	18351	4	1968	5prime_fragment	FALSE	canonical	3	755	junction_12	41.6056219491763	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAAGCAGCTAAGCACCC	NA	False	NA	NA	False	AAGAAA	-2	NA	74607140	74465790	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_74465814_74467755_74467849_74468945_74469064_74469984_74470074_74471172_74471287_74472348_74472412_74474545_74474633_74477395_74477534_74480240_74480395_74483022_74483125_74485795_74485918_74491000_74491216_74492956_74493141_74494759_74494832_74496440_74496645_74503530_74503747_74508838_74508926_74532120_74532154_74606656
transcript_77981.nic	chr16	-	2572	18	ISM	ENSG00000090863.12	ENST00000422840.7	9287	26	-26	20319	4	0	5prime_fragment	FALSE	canonical	3	755	junction_11	42.7870723935845	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTAACTTTTTGCTTTTC	NA	False	NA	NA	False	NA	NA	NA	74607140	74467758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_74467849_74468945_74469064_74469984_74470074_74471172_74471287_74472348_74472412_74474545_74474633_74477395_74477534_74480240_74480395_74483022_74483125_74485795_74485918_74491000_74491216_74492956_74493141_74494759_74494832_74496440_74496645_74503530_74503747_74508838_74508926_74532120_74532154_74606656
transcript_77986.nic	chr16	-	2361	16	ISM	ENSG00000090863.12	ENST00000422840.7	9287	26	-26	22548	4	-1734	5prime_fragment	FALSE	canonical	3	755	junction_9	40.2786957749793	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTATGTAGCTTGTAGTT	NA	False	NA	NA	False	CATAAA	-4	NA	74607140	74469987	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_74470074_74471172_74471287_74472348_74472412_74474545_74474633_74477395_74477534_74480240_74480395_74483022_74483125_74485795_74485918_74491000_74491216_74492956_74493141_74494759_74494832_74496440_74496645_74503530_74503747_74508838_74508926_74532120_74532154_74606656
transcript_7799.known	chr1	-	1486	3	FSM	ENSG00000253313.6	ENST00000523677.6	1486	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCACTCATTTTTATTT	-43284346	True	NA	-26	True	AATAAA	-30	NA	43285581	43281876	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_43283108_43283251_43283369_43285443
transcript_78.known	SIRV1	-	744	3	FSM	SIRV1A	SIRV107	744	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAGGCGCAAGGTACAT	NA	False	NA	NA	False	GATAAA	-18	NA	11643	10647	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV1_-_10792_10882_11243_11403
transcript_7800.known	chr1	-	629	3	FSM	ENSG00000253313.6	ENST00000423420.1	629	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	35.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAACCCCACTTCCCTGA	-43284382	True	NA	NA	False	GGGGCT	-21	NA	43285617	43282660	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_43283108_43283251_43283369_43285552
transcript_78003.known	chr16	-	3033	14	FSM	ENSG00000168411.14	ENST00000571750.5	3033	14	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_13	93.3328331911085	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCTTGTGTCCGGTTTA	-74661278	True	NA	NA	False	NA	NA	NA	74666870	74623428	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_74624072_74626342_74626555_74628451_74628667_74630780_74630958_74632522_74632674_74636345_74636578_74637855_74637971_74644361_74644454_74644540_74644736_74649131_74649203_74651919_74652123_74660931_74661452_74664623_74664746_74666785
transcript_78007.known	chr16	-	4948	13	FSM	ENSG00000168411.14	ENST00000361070.9	4948	13	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_12	59.7701616379128	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGCTCCTAGTGCCTTT	-74661285	True	NA	-11	True	AATAAA	-15	NA	74666877	74621398	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_74624072_74626342_74626555_74628451_74628667_74630780_74630958_74632522_74632674_74636345_74636578_74637855_74637971_74644361_74644454_74644540_74644736_74649131_74649203_74651919_74652123_74660931_74661452_74666785
transcript_7802.known	chr1	+	3893	23	FSM	ENSG00000066056.14	ENST00000372476.8	3893	23	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_12	2.08298895225265	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATGTCTACCTTTTACT	43300922	True	NA	NA	False	AATAAA	-18	NA	43300981	43323108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43301130_43304850_43305166_43305232_43305344_43306839_43306996_43307141_43307274_43307431_43307573_43307795_43307925_43308985_43309132_43309387_43309533_43311670_43311830_43311993_43312132_43312304_43312602_43313134_43313426_43313777_43313969_43317198_43317410_43317563_43317675_43317881_43318073_43319234_43319349_43319458_43319530_43321268_43321310_43321395_43321493_43321615_43321716_43322650
transcript_78023.known	chr16	-	841	3	FSM	ENSG00000168411.14	ENST00000575397.5	841	3	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_2	18	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACTTCACAAAGTAATGAA	-74661240	True	NA	NA	False	AATAAA	-11	NA	74666832	74660779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_74661452_74664623_74664746_74666785
transcript_78024.known	chr16	-	458	2	FSM	ENSG00000168411.14	ENST00000572840.1	458	2	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAGTAGCTTGGGCCTTA	-74661240	True	NA	NA	False	NA	NA	NA	74666832	74664334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_74664746_74666785
transcript_78030.known	chr16	-	2477	11	FSM	ENSG00000168404.13	ENST00000308807.12	2477	11	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_4	5.97411081249754	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGGTGGTTTTTTAC	-74700492	True	NA	-1	True	AATAAA	-22	NA	74700862	74671854	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_74672539_74674959_74675101_74675354_74675405_74675612_74675765_74678898_74678981_74682650_74682787_74685485_74685584_74691276_74691464_74692341_74692417_74695297_74695760_74700452
transcript_78036.known	chr16	-	2405	7	FSM	ENSG00000103089.9	ENST00000219368.8	2405	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	7.3352270282218	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAACCAACAAAAATGAGTT	-74774074	True	NA	NA	False	AATAAA	-40	NA	74774820	74712968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_74714270_74716346_74716600_74718987_74719161_74726224_74726332_74727243_74727387_74740022_74740116_74774485
transcript_78037.nnic	chr16	-	2319	7	NNC	ENSG00000103089.9	novel	2405	7	NA	NA	-24761	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_6	15.7338982949413	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGTTCATCAGACTCC	NA	False	NA	NA	False	AATAAA	-25	NA	74799592	74712954	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_74714270_74716346_74716600_74718987_74719161_74726224_74726332_74727243_74727387_74740022_74740116_74799357
transcript_78049.known	chr16	-	5878	26	FSM	ENSG00000103091.15	ENST00000262144.11	5878	26	0	0	0	0	multi-exon	TRUE	canonical	3	131	junction_11	22.0943431674264	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTTGTTTGTTTATTTG	-74981381	True	NA	NA	False	AATAGA	-18	NA	74985123	74871361	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_74874445_74885652_74885796_74886269_74886397_74887682_74887756_74888168_74888320_74889702_74889816_74892483_74892566_74893678_74893813_74903946_74904101_74908907_74908978_74909500_74909658_74909821_74909918_74912197_74912363_74915869_74915995_74916126_74916260_74917928_74918009_74921946_74922104_74923925_74924004_74938149_74938267_74942737_74942827_74948518_74948557_74949717_74949799_74951457_74951544_74956474_74956611_74965772_74965823_74984963
transcript_78051.nnic	chr16	-	3557	25	NIC	ENSG00000103091.15	novel	5878	26	NA	NA	-40	492	combination_of_known_splicesites	FALSE	canonical	3	12	junction_23	40.5490101262931	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAAAGTTAAACAACAT	NA	False	NA	-18	True	AATAAA	-29	NA	74985163	74873586	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_74874445_74885652_74885796_74886269_74886397_74887682_74887756_74888168_74888320_74889702_74889816_74892483_74892566_74893678_74893813_74903946_74904101_74908907_74908978_74909500_74909658_74909821_74909918_74912197_74912363_74915869_74915995_74916126_74916260_74917928_74918009_74921946_74922104_74923925_74924004_74938149_74938267_74942737_74942827_74948518_74948557_74949717_74949799_74951457_74951544_74965772_74965823_74984963
transcript_7806.known	chr1	+	1649	11	FSM	ENSG00000117399.14	ENST00000310955.11	1649	11	0	0	0	0	multi-exon	TRUE	canonical	3	1559	junction_1	274.030381527304	1350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTCAGCTAATGCCTT	43346072	True	NA	63	True	AATAAA	-32	NA	43358980	43363203	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43359007_43359166_43359397_43359489_43359639_43359724_43359822_43359968_43360098_43360192_43360390_43360498_43360594_43360732_43360962_43361119_43361246_43362194_43362313_43362950
transcript_78088.known	chr16	-	1953	17	FSM	ENSG00000103091.15	ENST00000616369.4	1953	17	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	21.8771427521969	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCTGTATGGTTATTA	-74981341	True	NA	1	True	ATTAAA	-18	NA	74985083	74908732	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_74908978_74909500_74909658_74909821_74909918_74912197_74912363_74915869_74915995_74916126_74916260_74917928_74918009_74921946_74922104_74923925_74924004_74938149_74938267_74942737_74942827_74948518_74948557_74949717_74949799_74951457_74951544_74956474_74956611_74965772_74965823_74984963
transcript_78099.nic	chr16	-	1615	14	ISM	ENSG00000103091.15	ENST00000616369.4	1953	17	-80	3385	-40	0	5prime_fragment	FALSE	canonical	3	167	junction_7	12.7148983107713	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGATGAGATTCGGAAGT	NA	False	NA	-8	True	AGTAAA	-17	NA	74985163	74912117	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_74912363_74915869_74915995_74916126_74916260_74917928_74918009_74921946_74922104_74923925_74924004_74938149_74938267_74942737_74942827_74948518_74948557_74949717_74949799_74951457_74951544_74956474_74956611_74965772_74965823_74984963
transcript_78113.known	chr16	+	4626	5	FSM	ENSG00000186187.12	ENST00000335325.9	4626	5	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_1	8.78564169540279	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCTCAGGTTGGTGTAAC	74994847	True	NA	NA	False	NA	NA	NA	74999023	75110994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_75000096_75093571_75093668_75104783_75104890_75106481_75106572_75107732
transcript_78114.known	chr16	-	2007	11	FSM	ENSG00000166816.15	ENST00000450168.3	2007	11	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	7.37631344236401	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACCTGGAAGTCAGCAGG	-75116470	True	NA	-9	True	AATAAA	-29	NA	75116780	75111863	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75112522_75112601_75112714_75112833_75112925_75113534_75113663_75113741_75113871_75113965_75114166_75114525_75114686_75114826_75114969_75115197_75115340_75115547_75115661_75116648
transcript_78117.known	chr16	-	2067	11	FSM	ENSG00000166816.15	ENST00000300051.8	2067	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	11.6451706728583	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAAGTCAGCAGGCAGC	-75116457	True	NA	-5	True	AATAAA	-33	NA	75116767	75111859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75112522_75112601_75112714_75112833_75112925_75113534_75113663_75113741_75113871_75113965_75114235_75114525_75114686_75114826_75114969_75115197_75115340_75115547_75115661_75116648
transcript_78130.known	chr16	-	2043	11	FSM	ENSG00000166816.15	ENST00000569876.2	2043	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	17.7270979012358	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAATAAATCTGTAATAAAC	-75116445	True	NA	-45	True	NA	NA	NA	75116755	75111899	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75112522_75112601_75112714_75112833_75112925_75113534_75113654_75113741_75113871_75113965_75114235_75114525_75114686_75114826_75114969_75115197_75115340_75115547_75115661_75116611
transcript_78133.known	chr16	+	3250	4	FSM	ENSG00000184517.12	ENST00000393430.6	3250	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	19.1369334592098	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTCTTTGTATATGAT	75147901	False	NA	10	True	AATAAA	-17	NA	75148581	75172236	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_75148663_75152908_75152967_75166769_75166897_75169252
transcript_78137.known	chr16	+	3067	4	FSM	ENSG00000184517.12	ENST00000464850.5	3067	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	23.5088635766739	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGTATTTTTTGGTAA	75147846	True	NA	-86	True	AATAAA	-36	NA	75148526	75172000	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_75148644_75152908_75152967_75166769_75166914_75169252
transcript_78148.known	chr16	-	3387	8	FSM	ENSG00000050820.17	ENST00000418647.7	3387	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	291.95372851162	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCAGTGCAGTTTGGTGT	-75262215	True	NA	NA	False	NA	NA	NA	75266007	75229158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75230024_75233845_75233936_75234888_75235987_75236881_75236999_75237182_75237345_75242469_75243091_75264350_75264602_75265824
transcript_78156.known	chr16	-	4085	7	FSM	ENSG00000050820.17	ENST00000162330.10	4085	7	0	0	0	0	multi-exon	TRUE	canonical	3	380	junction_6	108.033945282644	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTTATTTGTGTTTTAC	-75248620	True	NA	0	True	NA	NA	NA	75251624	75228180	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75230024_75233845_75233936_75234888_75235987_75236881_75236999_75237182_75237345_75242469_75243091_75251470
transcript_78158.known	chr16	-	3192	7	FSM	ENSG00000050820.17	ENST00000538440.6	3192	7	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_6	159.07728729562	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTCGTTATTGGTTTTC	-75262215	True	NA	-79	True	NA	NA	NA	75266007	75229102	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75230024_75233845_75233936_75234888_75235987_75236881_75236999_75237182_75237345_75242469_75243091_75265824
transcript_78175.known	chr16	-	4084	1	FSM	ENSG00000280152.1	ENST00000624205.1	4084	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-75249863	False	NA	NA	False	AATAGA	-16	NA	75250077	75245993	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75246000_75250100
transcript_78176.known	chr16	-	1293	7	FSM	ENSG00000153774.9	ENST00000283882.4	1293	7	0	0	0	0	multi-exon	FALSE	canonical	3	911	junction_4	96.6443939858329	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACCTCGCTCACCTTCCCT	-75418950	True	NA	17	True	AATAAA	-41	NA	75433503	75293709	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75294043_75305023_75305183_75395089_75395210_75411824_75411953_75412534_75412755_75414577_75414696_75433288
transcript_78179.known	chr16	-	1167	5	FSM	ENSG00000153774.9	ENST00000566901.5	1167	5	0	0	0	0	multi-exon	FALSE	canonical	3	911	junction_2	59.9723894804934	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-75418908	True	NA	NA	False	NA	NA	NA	75433461	75394681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75395210_75411824_75411953_75412534_75412755_75414577_75414696_75433288
transcript_78180.known	chr16	-	608	4	FSM	ENSG00000153774.9	ENST00000565646.5	608	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	468.027776953462	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTAATGTTCCTTCAGCTC	-75418920	True	NA	NA	False	AAGAAA	-8	NA	75433473	75395134	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75395210_75411824_75411953_75412534_75412755_75433288
transcript_78181.nic	chr16	-	650	4	ISM	ENSG00000153774.9	ENST00000564286.1	775	5	-46	5297	-13	2764	5prime_fragment	FALSE	canonical	3	911	junction_1	26.0426999794995	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAAATCACCAAGGTGTT	-75418963	True	NA	21	True	AAGAAA	-9	NA	75433516	75411868	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_75411953_75412534_75412755_75414577_75414696_75433288
transcript_78183.nic	chr16	-	458	3	ISM	ENSG00000153774.9	ENST00000564286.1	775	5	-46	6071	-13	1990	5prime_fragment	FALSE	canonical	3	963	junction_1	3	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATTGGATCAGAGGATGC	-75418963	True	NA	5	True	NA	NA	NA	75433516	75412642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_75412755_75414577_75414696_75433288
transcript_78184.nic	chr16	-	325	2	ISM	ENSG00000153774.9	ENST00000564286.1	775	5	-46	8027	-13	34	5prime_fragment	FALSE	canonical	3	969	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCCAGAGCATTCCAGCCA	-75418963	True	NA	17	True	AAAAAG	-4	NA	75433516	75414598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_75414696_75433288
transcript_7820.known	chr1	+	1777	10	FSM	ENSG00000117399.14	ENST00000372462.1	1777	10	0	0	0	0	multi-exon	FALSE	canonical	3	2055	junction_6	162.067506130038	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTCAGCTAATGCCTT	43346104	False	NA	63	True	AATAAA	-32	NA	43359012	43363203	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43359397_43359489_43359639_43359724_43359822_43359968_43360098_43360192_43360390_43360498_43360594_43360732_43360962_43361119_43361246_43362194_43362313_43362950
transcript_78208.nic	chr16	-	2314	3	NIC	ENSG00000166822.13	novel	2331	3	NA	NA	-31	21	combination_of_known_junctions	FALSE	canonical	3	35	junction_2	23.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGGAGGACCAATTTGCC	-75464425	False	NA	26	True	AAAAAG	-7	NA	75464447	75445692	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_75447689_75451737_75451840_75464231
transcript_78209.known	chr16	-	4959	3	FSM	ENSG00000166822.13	ENST00000357613.8	4959	3	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	36.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAAATTCTTATTAACTC	-75460560	True	NA	-4	True	ATTAAA	-19	NA	75464689	75443053	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75447689_75451737_75451840_75464467
transcript_78211.known	chr16	-	547	3	FSM	ENSG00000166822.13	ENST00000566980.1	547	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	36.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTTCATGTGTACCTTT	-75464715	False	NA	NA	False	AAAACA	-40	NA	75464737	75447309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75447689_75451737_75451840_75464671
transcript_78212.known	chr16	-	2331	3	FSM	ENSG00000166822.13	ENST00000569540.5	2331	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	55.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	-75464394	False	4129	5	True	NA	NA	NA	75464416	75445713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75447689_75451668_75451840_75464231
transcript_78213.known	chr16	-	5028	3	FSM	ENSG00000166822.13	ENST00000561878.2	5028	3	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	4.5	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAAATTCTTATTAACTC	-75460560	True	NA	-4	True	ATTAAA	-19	NA	75464689	75443053	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75447689_75451668_75451840_75464467
transcript_78221.known	chr16	-	2000	4	FSM	ENSG00000183196.10	ENST00000649341.1	2000	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	9.8770215933527	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAACCAGGCCATCCTAG	-75493311	True	NA	NA	False	NA	NA	NA	75495445	75473360	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75473468_75478532_75479845_75481816_75481892_75494939
transcript_78225.nnic	chr16	-	979	3	NIC	ENSG00000183196.10	novel	2000	4	NA	NA	-54	57	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	8	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGTTGTGGTGGTTT	-75493365	True	NA	0	True	AATAAA	-23	NA	75495499	75473123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_75473468_75481816_75481892_75494939
transcript_7823.known	chr1	-	1215	8	FSM	ENSG00000066322.15	ENST00000470769.5	1215	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	65.9532920686593	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCACCTTAGGGCAGTGTC	-43364786	False	NA	NA	False	NA	NA	NA	43366587	43363874	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_43364138_43364323_43364461_43364541_43364648_43364737_43364795_43364927_43365009_43365185_43365377_43365563_43365624_43366267
transcript_78230.nnic	chr16	-	2537	4	NIC	ENSG00000262583.2	novel	1443	4	NA	NA	-78	6	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	22.9540604009158	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTAATTTTTTTTTTTCT	-75516976	True	NA	NA	False	AATAAA	-25	NA	75517338	75501686	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_75502815_75504680_75504825_75505154_75505284_75516202
transcript_78231.nnic	chr16	-	2621	4	NIC	ENSG00000262583.2	novel	1443	4	NA	NA	-70	6	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	23.5088635766739	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTAATTTTTTTTTTTCT	-75516968	True	NA	NA	False	AATAAA	-25	NA	75517330	75501686	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_75502815_75504680_75504825_75505154_75505376_75516202
transcript_78239.known	chr16	-	1869	11	FSM	ENSG00000065457.11	ENST00000307921.7	1869	11	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_10	15.9172862008572	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATCTGACTTCCATTGTGT	-75620966	True	NA	-77	True	NA	NA	NA	75623300	75600001	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75600349_75603084_75603172_75608223_75608324_75608842_75608989_75612242_75612862_75617141_75617273_75618585_75618641_75620265_75620335_75620630_75620821_75622402_75622465_75623237
transcript_7824.known	chr1	-	973	8	FSM	ENSG00000066322.15	ENST00000497050.5	973	8	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_7	65.9532920686593	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGATGTATGGCACCATC	-43365937	False	NA	NA	False	NA	NA	NA	43367738	43364049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_43364138_43364323_43364461_43364541_43364648_43364737_43364795_43364927_43365009_43365185_43365377_43365563_43365624_43367485
transcript_78242.known	chr16	-	5757	10	FSM	ENSG00000065457.11	ENST00000564657.2	5757	10	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	10.9420471147646	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAATGTTTTGTTTATCC	-75620947	True	NA	-26	True	AATAAA	-16	NA	75623281	75596867	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75600349_75603084_75603172_75608223_75608324_75608842_75608989_75612242_75612862_75617141_75617273_75618585_75618641_75620265_75620335_75620630_75620821_75622402
transcript_78243.nnic	chr16	-	3414	10	NNC	ENSG00000065457.11	novel	5757	10	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_9	24.189070075369	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-75620930	True	NA	NA	False	NA	NA	NA	75623264	75599099	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_75600349_75603084_75603172_75608223_75608324_75608842_75608989_75612242_75612862_75617141_75617273_75618585_75618641_75620265_75620335_75620630_75620821_75622496
transcript_78244.known	chr16	-	2768	10	FSM	ENSG00000065457.11	ENST00000566445.5	2768	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	25.0288722167908	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-75622403	False	NA	NA	False	NA	NA	NA	75622466	75599099	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75600349_75603084_75603172_75608223_75608324_75608842_75608989_75612242_75612862_75617141_75617273_75618585_75618699_75620265_75620335_75620630_75620821_75622402
transcript_7825.known	chr1	-	1466	8	FSM	ENSG00000066322.15	ENST00000372458.8	1466	8	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_2	11.141025490483	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAGGCTGTGTGTATACGT	-43366210	True	NA	-5	True	ATTAAA	-18	NA	43368011	43363400	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_43364138_43364323_43364461_43364541_43364648_43364737_43364795_43364927_43365009_43365185_43365377_43365563_43365624_43367914
transcript_78252.known	chr16	-	4247	7	FSM	ENSG00000205084.12	ENST00000258173.11	4247	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	24.989442215108	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGCTGGTTTATTTCCT	-75555446	True	NA	0	True	TATAAA	-17	NA	75556252	75536740	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75540175_75541349_75541456_75542601_75542684_75545351_75545496_75545825_75545955_75555803_75555974_75556070
transcript_78253.known	chr16	-	2991	7	FSM	ENSG00000205084.12	ENST00000562410.5	2991	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	28.9678941051794	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAGTCAAAATGGAAG	-75555462	True	NA	-17	True	AATAAA	-13	NA	75556268	75538135	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75540175_75541349_75541456_75542601_75542684_75545351_75545496_75545825_75546078_75555803_75555974_75556070
transcript_78259.known	chr16	-	922	7	FSM	ENSG00000205084.12	ENST00000570006.5	922	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	29.8477618740315	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCACTTATCCTAGAAAGG	-75555427	True	NA	NA	False	NA	NA	NA	75556233	75540008	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75540175_75541349_75541456_75542601_75542684_75545351_75545496_75545863_75545955_75555803_75555974_75556070
transcript_78266.known	chr16	-	568	6	FSM	ENSG00000205084.12	ENST00000569294.1	568	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	34.3476345619316	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTGCTTATCTTCCTCT	-75554465	False	806	NA	False	NA	NA	NA	75555271	75540120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75540175_75541349_75541456_75542601_75542684_75545351_75545496_75545825_75545955_75555218
transcript_7827.known	chr1	-	1034	8	FSM	ENSG00000066322.15	ENST00000464204.5	1034	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	70.8173851594107	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGCTTTGGTTCCTCACC	-43366206	True	NA	NA	False	NA	NA	NA	43368007	43363755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_43364138_43364323_43364461_43364614_43364648_43364737_43364795_43364927_43365009_43365185_43365377_43365563_43365624_43367914
transcript_78271.known	chr16	+	974	4	FSM	ENSG00000034713.8	ENST00000037243.7	974	4	0	0	0	0	multi-exon	FALSE	canonical	3	671	junction_1	6.54896090146283	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTACTGTGGCCATGTCCT	75549190	True	NA	NA	False	AATAAA	-19	NA	75566378	75577881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_75566521_75566851_75566908_75568036_75568210_75577278
transcript_78275.known	chr16	+	1976	4	FSM	ENSG00000166848.7	ENST00000653858.1	1976	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	66.7149824918578	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTTTACCCTGAAAATAAA	75646500	True	NA	NA	False	AAAAAG	-23	NA	75647790	75761830	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_75648553_75654272_75654398_75760049_75760141_75760832
transcript_78276.known	chr16	+	2131	3	FSM	ENSG00000166848.7	ENST00000300086.5	2131	3	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	2.5	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCGTCAATAAGTGTTTT	75646482	True	NA	52	True	AATAAA	-18	NA	75647772	75657432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_75648553_75654272_75654398_75656206
transcript_78286.known	chr16	-	2421	15	FSM	ENSG00000065427.15	ENST00000319410.9	2421	15	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_14	311.881158685255	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTCTTTCTGGTGGTGG	-75633567	True	NA	-21	True	AGTAAA	-3	NA	75647665	75627473	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75627994_75628568_75628713_75629414_75629542_75630422_75630509_75631167_75631254_75631415_75631590_75631692_75631856_75634172_75634293_75635679_75635806_75635911_75636099_75636453_75636548_75640183_75640350_75641563_75641724_75644282_75644463_75647577
transcript_78296.known	chr16	-	1991	14	FSM	ENSG00000065427.15	ENST00000302445.8	1991	14	0	0	0	0	multi-exon	FALSE	canonical	3	781	junction_13	120.738016544307	1353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATTTGTCTCTTCTCTTT	-75633567	True	NA	-49	True	ATTAAA	-30	NA	75647665	75627723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75627994_75628568_75628713_75629414_75629542_75630422_75630509_75631167_75631254_75631415_75631590_75631692_75631856_75634172_75634293_75635679_75635806_75635911_75636099_75636453_75636548_75640183_75640350_75641563_75641724_75647577
transcript_78300.known	chr16	-	1942	14	FSM	ENSG00000065427.15	ENST00000564578.5	1942	14	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_11	396.479507667168	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAGACAAGGAATTAAAAAT	-75633550	True	NA	-95	True	NA	NA	NA	75647648	75627769	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75627994_75628568_75628713_75629414_75629542_75630422_75630509_75631167_75631254_75631415_75631590_75631692_75631856_75634172_75634293_75635679_75635806_75635911_75636099_75636453_75636548_75641563_75641724_75644282_75644463_75647577
transcript_7831.known	chr1	-	828	7	FSM	ENSG00000066322.15	ENST00000487209.5	828	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	64.6675257674893	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACCTGTGACCAAGGCTT	-43366198	True	NA	NA	False	NA	NA	NA	43367999	43363835	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_43364138_43364323_43364461_43364541_43364648_43364737_43364795_43364927_43365009_43365563_43365624_43367914
transcript_7832.known	chr1	-	1451	7	FSM	ENSG00000066322.15	ENST00000413844.3	1451	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	77.0449003287477	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGTGTGTATACGTATG	NA	False	NA	-2	True	ATTAAA	-21	NA	43368074	43363397	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_43364138_43364323_43364461_43364541_43364648_43364737_43364795_43365185_43365377_43365563_43365624_43367914
transcript_78323.known	chr16	-	649	6	FSM	ENSG00000065427.15	ENST00000566249.5	649	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	359.132064845232	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATCACTTATCACAACGAG	-75647594	False	NA	NA	False	NA	NA	NA	75647607	75634240	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_75634293_75635679_75635806_75635911_75636099_75636453_75636548_75641563_75641724_75647577
transcript_78334.known	chr16	+	5813	6	FSM	ENSG00000103111.15	ENST00000248248.8	5813	6	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	8.18290901819151	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTACTGTGCTGGCCAT	77189471	True	NA	14	True	AATAAA	-15	NA	77191189	77202398	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_77191259_77191475_77191634_77193450_77193778_77194334_77195155_77195534_77195683_77198107
transcript_78342.nic	chr16	+	3909	5	NIC	ENSG00000103111.15	novel	5813	6	NA	NA	-38	0	intron_retention	FALSE	canonical	3	120	junction_1	8.8423695919137	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTTATTGAAGAAAAACAAT	NA	False	NA	4	True	AATAAA	-14	NA	77190888	77199636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_77191259_77191475_77191634_77193450_77195155_77195534_77195683_77198107
transcript_78344.known	chr16	+	1759	5	FSM	ENSG00000103111.15	ENST00000439557.6	1759	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	55.8435314069589	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGTGTCTAGGGTGGCCC	77189473	True	NA	NA	False	NA	NA	NA	77191191	77198673	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_77191259_77191475_77191634_77194334_77195155_77195534_77195683_77198107
transcript_78347.known	chr16	+	1814	4	FSM	ENSG00000103111.15	ENST00000545553.1	1814	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	64.3583716388164	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCCTTCAGTGTCCACCT	77189481	True	NA	113	True	NA	NA	NA	77191199	77198894	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_77191259_77194334_77195155_77195534_77195683_77198107
transcript_78348.known	chr16	+	1057	11	FSM	ENSG00000205078.6	ENST00000378644.5	1057	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	22.9860827458704	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAACAGGGGCCGGAGGG	77199387	False	NA	NA	False	NA	NA	NA	77199407	77213215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_77199513_77206440_77206501_77208209_77208270_77208464_77208540_77209096_77209145_77209416_77209472_77211212_77211277_77212129_77212200_77212281_77212370_77212573_77212647_77212856
transcript_78350.known	chr16	+	598	2	FSM	ENSG00000205078.6	ENST00000568925.1	598	2	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAACAGGGGCCGGAGGG	77212379	False	NA	NA	False	NA	NA	NA	77212407	77213215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_77212647_77212856
transcript_78351.known	chr16	+	899	5	FSM	ENSG00000140876.11	ENST00000564085.5	899	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	41.1885906532379	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACTATTCACGAGGATT	77721826	True	NA	NA	False	CATAAA	-41	NA	77722513	77741969	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_77722618_77725430_77725585_77735827_77735987_77736649_77736744_77741581
transcript_78352.known	chr16	+	1096	4	FSM	ENSG00000140876.11	ENST00000268533.9	1096	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	43.1508980207828	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTGGCATTTACCTTAT	77721826	True	NA	NA	False	AATAAA	-19	NA	77722513	77742260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_77722618_77725430_77725585_77735827_77735987_77741581
transcript_78355.known	chr16	+	678	3	FSM	ENSG00000140876.11	ENST00000568787.5	678	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	37.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGAGATGCTTCAGAATT	77721828	True	NA	NA	False	NA	NA	NA	77722515	77736249	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_77722618_77725430_77725585_77735827
transcript_78356.known	chr16	+	930	3	FSM	ENSG00000140876.11	ENST00000437314.3	930	3	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	32.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATGTGGCATTTACCTT	77721831	True	NA	NA	False	AATAAA	-17	NA	77722518	77742258	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_77722618_77725430_77725585_77741581
transcript_78360.known	chr16	+	3791	9	FSM	ENSG00000171724.3	ENST00000302536.3	3791	9	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_8	9.95536915438097	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCATCTGCTATTCCAC	77787043	True	NA	18	True	AATAAA	-24	NA	77788563	77980107	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_77788916_77816920_77817051_77825245_77825462_77862747_77862891_77876369_77876474_77879168_77879225_77884607_77884803_77971849_77971934_77977596
transcript_78364.nic	chr16	+	2056	7	NIC	ENSG00000171724.3	novel	3791	9	NA	NA	-41	702	combination_of_known_junctions	FALSE	canonical	2	2	junction_6	53.2374137446798	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTCAGTCTCCTTAATTC	77787002	True	NA	9	True	AATAAA	-12	NA	77788522	77883110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_77788916_77816920_77817051_77825245_77825462_77862747_77862891_77876369_77876474_77879168_77879225_77882096
transcript_78367.nnic	chr16	+	2475	6	Fusion	ENSG00000276007.1_ENSG00000186153.18	novel	2447	6	NA	NA	-8	-2	multi-exon	FALSE	non_canonical	0	0	junction_5	33.9847024409513	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGGCGATTCTGGGAAT	78096204	True	NA	6	True	AATAAA	-11	NA	78099645	78124330	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr16_+_78099886_78108422_78108488_78109777_78109836_78114975_78115155_78118954_78120291_78123733
transcript_78368.known	chr16	+	710	6	FSM	ENSG00000186153.18	ENST00000355860.7	710	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_5	28.082734909549	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTACATCTTCTTTTGTGG	78096237	True	NA	7	True	AATAAA	-21	NA	78099678	78278696	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_78099886_78108422_78108488_78109777_78109836_78114975_78115155_78164182_78164290_78278602
transcript_78369.known	chr16	+	654	5	FSM	ENSG00000186153.18	ENST00000562214.5	654	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	27.0127284812179	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGAGGCCCGGAACCCCG	78096214	True	NA	NA	False	NA	NA	NA	78099655	78119076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_78099886_78108422_78108488_78109777_78109836_78114975_78115155_78118954
transcript_78372.known	chr16	+	448	4	FSM	ENSG00000186153.18	ENST00000565562.5	448	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	33.5095342982992	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCGTTCGGGGCCACTAC	78096292	True	NA	NA	False	GATAAA	-13	NA	78099733	78111992	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_78099886_78108422_78108488_78109777_78109836_78111819
transcript_78373.nic	chr16	+	282	2	ISM	ENSG00000186153.18	ENST00000565562.5	448	4	-78	3518	0	-3518	5prime_fragment	FALSE	canonical	3	79	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGTGGCAGGAGGTTTGTA	78096214	True	NA	20	True	AAAAAG	-5	NA	78099655	78108474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_78099886_78108422
transcript_78374.known	chr16	+	525	1	FSM	ENSG00000186153.18	ENST00000569818.1	525	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTCAGCTCCCTCCTGC	78096233	True	NA	6	True	AATAAA	-19	NA	78099674	78100199	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_78099700_78100200
transcript_78375.known	chr16	-	2669	2	FSM	ENSG00000178573.7	ENST00000326043.5	2669	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCTCTGTGTGATTTTTT	-79600595	True	NA	NA	False	AATACA	-17	NA	79600737	79593837	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_79594554_79598784
transcript_7838.known	chr1	-	867	6	FSM	ENSG00000066322.15	ENST00000470968.6	867	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	81.832511876393	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTCTACAGGGACCACGG	-43366224	True	NA	NA	False	NA	NA	NA	43368025	43363770	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_43364138_43364737_43364795_43364927_43365009_43365185_43365377_43365563_43365624_43367914
transcript_78387.known	chr16	+	3928	11	FSM	ENSG00000166451.14	ENST00000305850.10	3928	11	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_7	446.833179161978	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCAGTGTGGTCTTTTGC	80995248	True	NA	17	True	AATAAA	-19	NA	81007213	81031485	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_81007278_81011929_81012111_81014135_81014182_81017325_81017386_81017757_81017835_81020099_81020277_81022596_81022699_81024714_81024779_81026525_81026639_81028170_81028298_81028568
transcript_78397.known	chr16	+	971	10	FSM	ENSG00000166451.14	ENST00000428963.6	971	10	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_6	459.246914409952	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTCTTAAGCACAGCTCC	80995278	True	NA	22	True	GATAAA	-13	NA	81007243	81028660	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_81007278_81011929_81012111_81014135_81014182_81017325_81017386_81017757_81017835_81020099_81020277_81024714_81024779_81026525_81026639_81028170_81028298_81028568
transcript_78398.known	chr16	+	1699	10	FSM	ENSG00000166451.14	ENST00000439957.7	1699	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	436.82357938437	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCACATCAGTTAATTTTG	80995241	True	NA	3	True	AATAAA	-14	NA	81007206	81029309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_81007278_81011929_81012111_81014135_81014182_81017757_81017835_81020099_81020277_81022596_81022699_81024714_81024779_81026525_81026639_81028170_81028298_81028568
transcript_78402.known	chr16	+	1398	7	FSM	ENSG00000166451.14	ENST00000299572.9	1398	7	0	0	0	0	multi-exon	FALSE	canonical	3	698	junction_6	149.707121481318	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATTGTGTTTTATACCA	81006460	False	NA	25	True	AATAAA	-27	NA	81006551	81022885	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_81007278_81011929_81012111_81014135_81014182_81017325_81017386_81017757_81017835_81020099_81020277_81022754
transcript_7841.known	chr1	-	1483	8	FSM	ENSG00000159479.17	ENST00000290663.10	1483	8	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	76.9542668321482	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCACTGGCTCAGGGTTG	-43386466	True	NA	-11	True	AATAAA	-15	NA	43389808	43383916	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_43384553_43385045_43385107_43385977_43386227_43386588_43386671_43386857_43386999_43387502_43387648_43388309_43388429_43389758
transcript_78416.known	chr16	-	887	5	FSM	ENSG00000260643.2	ENST00000638948.1	887	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	947.593399090559	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATACTATTTTGGAATGC	-81087745	False	NA	-98	True	NA	NA	NA	81096233	81053586	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_81054095_81084462_81084595_81087600_81087665_81090600_81090681_81096130
transcript_78417.known	chr16	-	1560	5	FSM	ENSG00000140905.11	ENST00000315467.9	1560	5	0	0	0	0	multi-exon	FALSE	canonical	3	2111	junction_3	104.972317779498	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGGACTCTGATAGTATT	-81087907	True	NA	NA	False	AATAAA	-34	NA	81096395	81081944	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_81082964_81084462_81084595_81087600_81087665_81090600_81090681_81096130
transcript_78422.known	chr16	+	4881	4	FSM	ENSG00000166454.10	ENST00000299575.5	4881	4	0	0	0	0	multi-exon	FALSE	canonical	3	460	junction_3	52.6392333615231	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTATTTTCATTGTTT	81031226	True	NA	8	True	GATAAA	-20	NA	81035841	81047350	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_81036207_81041355_81041482_81042280_81042481_81043160
transcript_78423.known	chr16	-	10072	4	FSM	ENSG00000103121.9	ENST00000219400.8	10072	4	0	0	0	0	multi-exon	FALSE	canonical	3	840	junction_1	144.693545890002	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAATTCATTATTTTTT	-80997750	True	NA	NA	False	ATTAAA	-19	NA	81006885	80966447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_80976180_80981805_80981878_80997313_80997430_81006733
transcript_78426.known	chr16	-	2537	4	FSM	ENSG00000140905.11	ENST00000639169.1	2537	4	0	0	0	0	multi-exon	FALSE	canonical	3	2111	junction_2	74.2173983795055	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGATACACTGCATTTGCT	-81087848	True	NA	-91	True	NA	NA	NA	81096336	81082407	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_81084595_81087600_81087665_81090600_81090681_81096130
transcript_78428.known	chr16	-	975	4	FSM	ENSG00000140905.11	ENST00000564386.6	975	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	1042.37325368603	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTCGTTAATCATGTTT	-81087777	False	NA	-19	True	AATAAA	-4	NA	81096265	81082335	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_81082964_81084462_81084595_81090600_81090681_81096130
transcript_78430.known	chr16	-	399	3	FSM	ENSG00000103121.9	ENST00000565108.5	399	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	557	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGGGTTGATACCTGAA	-80997751	True	NA	NA	False	AATAAA	-43	NA	81006886	80976049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_80976180_80997313_80997430_81006733
transcript_78431.known	chr16	-	403	3	FSM	ENSG00000140905.11	ENST00000561801.2	403	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	1167	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGTCTTAAATTAGTGG	-81087769	False	NA	NA	False	AATAAA	-27	NA	81096257	81082819	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_81082964_81084462_81084595_81096130
transcript_78434.known	chr16	-	647	3	FSM	ENSG00000140905.11	ENST00000569885.6	647	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	1073	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGAAATACTTAATGATC	-81087752	False	NA	NA	False	NA	NA	NA	81096240	81082506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_81082964_81090600_81090681_81096130
transcript_78435.known	chr16	+	505	2	FSM	ENSG00000166454.10	ENST00000562969.1	505	2	0	0	0	0	multi-exon	FALSE	canonical	3	575	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAGTTCAGCAAAGAATG	81036029	False	NA	NA	False	AATACA	-14	NA	81036057	81041711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_81036207_81041355
transcript_78436.known	chr16	-	1857	4	FSM	ENSG00000166455.14	ENST00000378611.8	1857	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.24721912892465	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGAGTTTTTGTTTTGT	-81077062	True	NA	-8	True	AATAAA	-20	NA	81077213	81053496	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_81054095_81061205_81062139_81063745_81063994_81077135
transcript_78438.known	chr16	-	1488	7	FSM	ENSG00000166473.17	ENST00000531391.5	1488	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2.21108319357027	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGCTCTGGGATCTGCT	-81181282	True	NA	0	True	AATAAA	-16	NA	81181329	81170288	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_81170806_81170942_81171075_81174719_81174915_81175604_81175751_81177806_81177984_81179644_81179787_81181150
transcript_7844.known	chr1	-	1968	7	FSM	ENSG00000159479.17	ENST00000372457.9	1968	7	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_6	35.512517354996	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCACTGGCTCAGGGTTG	-43386458	True	NA	-11	True	AATAAA	-15	NA	43389800	43383916	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_43385107_43385977_43386227_43386588_43386671_43386857_43386999_43387502_43387648_43388309_43388429_43389758
transcript_78440.known	chr16	+	15159	11	FSM	ENSG00000261609.8	ENST00000648994.2	15159	11	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_10	7.31846978541279	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAATTGTTTCTGATTTT	81314067	True	NA	16	True	AATAAA	-21	NA	81314961	81390809	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_81315281_81351582_81351698_81354404_81354756_81356784_81357003_81357809_81357932_81362498_81362612_81363793_81363944_81364973_81365111_81365349_81365479_81377218_81377329_81377414
transcript_78444.known	chr16	+	4163	10	FSM	ENSG00000261609.8	ENST00000648349.2	4163	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	9.74996043043569	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTGTTTTTTTTTTTTAA	81314049	True	NA	NA	False	TATAAA	-2	NA	81314943	81379910	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_81315281_81354404_81354756_81356784_81357003_81357809_81357932_81362498_81362612_81363793_81363944_81364973_81365111_81365349_81365479_81377218_81377329_81377414
transcript_78447.known	chr16	+	2794	1	FSM	ENSG00000279476.1	ENST00000624318.1	2794	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAGAAAATCAAGA	NA	False	NA	NA	False	AAGAAA	-2	NA	81517823	81520617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_81517800_81520600
transcript_7845.known	chr1	-	1186	7	FSM	ENSG00000159479.17	ENST00000372455.4	1186	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	98.5573718985828	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTTCTCCCCACCACCC	-43386442	True	NA	-13	True	AATAAA	-15	NA	43389784	43384725	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_43385107_43385977_43386227_43386588_43386671_43386857_43386999_43387502_43387630_43388309_43388490_43389758
transcript_78450.known	chr16	+	8666	33	FSM	ENSG00000197943.11	ENST00000564138.6	8666	33	0	0	0	0	multi-exon	TRUE	canonical	2	24	junction_16	6.70703921264816	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGCAATCTGCCCAGAAC	81778646	True	NA	NA	False	AATAAA	-18	NA	81779290	81962685	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_81779425_81785942_81786183_81854443_81854588_81858262_81858357_81859115_81859164_81869213_81869299_81870851_81870936_81880909_81880954_81883268_81883342_81889171_81889274_81891471_81891591_81893708_81893795_81895806_81895928_81900611_81900781_81905402_81905508_81907684_81907775_81908415_81908592_81910519_81910721_81912596_81912717_81919483_81919665_81921197_81921270_81923484_81923595_81927081_81927179_81928557_81928625_81931496_81931655_81934428_81934532_81936168_81936379_81937757_81937904_81938800_81938916_81939891_81940060_81946174_81946264_81956694_81956880_81957955
transcript_78460.known	chr16	-	1101	5	FSM	ENSG00000135698.10	ENST00000258169.9	1101	5	0	0	0	0	multi-exon	FALSE	canonical	3	791	junction_3	22.4874965258474	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTATATTTTCTTGTAC	-82160584	True	NA	-8	True	AATAAA	-17	NA	82170224	82148161	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_82148864_82149308_82149404_82151423_82151515_82164081_82164195_82170124
transcript_78470.known	chr16	+	8649	4	FSM	ENSG00000230989.8	ENST00000433866.7	8649	4	0	0	0	0	multi-exon	FALSE	canonical	2	4786	junction_2	1121.4860181424	940	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCATTTATCTTTATTTT	83768688	True	NA	NA	False	ATTAAA	-16	NA	83807977	83819737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_83808122_83808679_83808747_83809304_83809426_83811420
transcript_78481.known	chr16	+	1922	6	FSM	ENSG00000140961.14	ENST00000393306.6	1922	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.93907194296653	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATGCGTCTGAGGACTC	83953223	True	NA	NA	False	AATAAA	-17	NA	83953239	83966332	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_83953371_83957639_83957739_83959259_83959397_83960568_83960761_83960980_83961073_83965061
transcript_78482.known	chr16	+	13054	5	FSM	ENSG00000103150.7	ENST00000262430.6	13054	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	8.40758586040012	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTAGCATACCTGCACTC	83898255	True	NA	NA	False	AATAAA	-22	NA	83899114	83927031	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_83899673_83906986_83907100_83908125_83908283_83912217_83912368_83914955
transcript_78488.nic	chr16	+	2474	4	ISM	ENSG00000103150.7	ENST00000262430.6	13054	5	-41	13209	-41	-2349	5prime_fragment	FALSE	canonical	3	94	junction_1	9.17726659862414	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGGTTCGGGGTGGGGGA	83898214	True	NA	NA	False	NA	NA	NA	83899073	83913822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_83899673_83906986_83907100_83908125_83908283_83912217
transcript_78489.known	chr16	+	1996	13	FSM	ENSG00000103154.10	ENST00000681513.1	1996	13	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	6.12995831053433	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGCTCTGTGTCTGT	NA	False	NA	5	True	AATAAA	-16	NA	83968243	84002776	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_83968850_83972150_83972176_83978443_83978553_83980838_83980865_83981029_83981128_83990493_83990631_83994301_83994421_83994608_83994689_83997215_83997270_83998204_83998318_84000723_84000802_84001824_84001917_84002317
transcript_78498.known	chr16	-	4377	23	FSM	ENSG00000140943.18	ENST00000343411.8	4377	23	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_14	23.4344963640081	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTGTGTAACGGACTCT	-84112641	True	NA	-21	True	AATAAA	-27	NA	84116942	84053762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_84054646_84056004_84056136_84059301_84059429_84060681_84060814_84063304_84063446_84065689_84065768_84066488_84066614_84067666_84067824_84068338_84068455_84069865_84070039_84070587_84070777_84074596_84074742_84081746_84081909_84084982_84085135_84087357_84087461_84090874_84090943_84091731_84091849_84093187_84093298_84093710_84093822_84095601_84095806_84099052_84099311_84101620_84102108_84116734
transcript_78509.nic	chr16	-	4292	19	ISM	ENSG00000140943.18	ENST00000343411.8	4377	23	0	8354	0	-2814	5prime_fragment	FALSE	canonical	3	204	junction_10	20.7263921928862	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAATTAAAAGTGAGGGT	-84112641	True	NA	NA	False	AATAAA	-7	NA	84116942	84062116	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_84063446_84065689_84065768_84066488_84066614_84067666_84067824_84068338_84068455_84069865_84070039_84070587_84070777_84074596_84074742_84081746_84081909_84084982_84085135_84087357_84087461_84090874_84090943_84091731_84091849_84093187_84093298_84093710_84093822_84095601_84095806_84099052_84099311_84101620_84102108_84116734
transcript_78524.nic	chr16	-	859	3	ISM	ENSG00000140943.18	ENST00000343411.8	4377	23	0	45384	0	2588	5prime_fragment	FALSE	canonical	3	217	junction_2	11	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAAGCGGGGCTGCTAAC	-84112641	True	NA	NA	False	GATAAA	-8	NA	84116942	84099146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_84099311_84101620_84102108_84116734
transcript_78527.known	chr16	+	521	1	FSM	ENSG00000260018.1	ENST00000565382.1	521	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTCTGGGTGACTTAGAT	84116788	True	NA	30	True	AATAAA	-36	NA	84117050	84117571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_84117000_84117600
transcript_78529.known	chr16	-	1493	7	FSM	ENSG00000103160.12	ENST00000434463.7	1493	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	101.250514401985	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAAATGCTGCACTTCA	-84142133	True	NA	-45	True	NA	NA	NA	84145169	84124122	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_84124729_84129547_84129776_84129985_84130172_84130336_84130432_84131101_84131328_84135543_84135606_84145079
transcript_78532.known	chr16	-	3648	6	FSM	ENSG00000103160.12	ENST00000219439.9	3648	6	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_3	29.9372677444018	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATAACTATGTGCCT	-84142141	True	NA	-12	True	ATTAAA	-23	NA	84145177	84122140	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_84124729_84129547_84129776_84129985_84130432_84131101_84131328_84135543_84135606_84145079
transcript_78536.known	chr16	-	542	3	FSM	ENSG00000103160.12	ENST00000567294.5	542	3	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_2	31	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCATTTTCTTACTGCT	-84142156	True	NA	-1	True	AATAAA	-30	NA	84145192	84130960	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_84131328_84135543_84135606_84145079
transcript_7854.known	chr1	-	1025	9	FSM	ENSG00000178922.18	ENST00000372434.5	1025	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	17.3092280301578	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATATGTCTCTGTAATGG	-43453815	False	375	-4	True	ATTAAA	-19	NA	43453825	43451153	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_43451312_43451409_43451545_43451647_43451718_43451797_43451848_43451934_43452014_43452204_43452320_43452902_43453005_43453412_43453498_43453594
transcript_78541.nic	chr16	-	3696	15	NIC	ENSG00000103168.17	novel	3847	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	98.3553791728998	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGGGGAAAACTATGAT	-84182685	True	NA	-9	True	ATTAAA	-17	NA	84187063	84177854	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_84179852_84179945_84180084_84180169_84180345_84181042_84181187_84181327_84181464_84181591_84181664_84181745_84181864_84181941_84182059_84182201_84182441_84183071_84183150_84183243_84183334_84183409_84183508_84183696_84183779_84184850_84184900_84186900
transcript_78542.nic	chr16	-	3795	15	NIC	ENSG00000103168.17	novel	3847	15	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	101.25125345659	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGGGGAAAACTATGAT	-84182694	False	NA	-9	True	ATTAAA	-17	NA	84187072	84177854	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_84179852_84179945_84180084_84180169_84180345_84181042_84181187_84181327_84181464_84181591_84181664_84181745_84181864_84181941_84182059_84182201_84182441_84183071_84183150_84183243_84183334_84183409_84183508_84183696_84183779_84184850_84184990_84186900
transcript_78543.nic	chr16	-	3863	15	NIC	ENSG00000103168.17	novel	3847	15	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	86.2760164843519	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGGGGAAAACTATGAT	-84182691	True	NA	-9	True	ATTAAA	-17	NA	84187069	84177854	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_84179852_84179945_84180084_84180169_84180345_84181042_84181187_84181327_84181464_84181591_84181664_84181745_84181864_84181941_84182059_84182201_84182441_84183071_84183150_84183243_84183334_84183409_84183508_84183696_84183779_84184850_84185061_84186900
transcript_78548.nic	chr16	-	3172	15	NIC	ENSG00000103168.17	novel	3847	15	NA	NA	0	370	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	98.3553791728998	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAATGGTCACGTTTTTT	-84182685	True	NA	0	True	AATACA	-20	NA	84187063	84178378	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_84179852_84179945_84180084_84180169_84180345_84181042_84181187_84181327_84181464_84181591_84181664_84181745_84181864_84181941_84182059_84182201_84182441_84183071_84183150_84183243_84183334_84183409_84183508_84183696_84183779_84184850_84184900_84186900
transcript_78549.nic	chr16	-	3271	15	NIC	ENSG00000103168.17	novel	3847	15	NA	NA	-2	370	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	101.25125345659	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAATGGTCACGTTTTTT	-84182694	False	NA	0	True	AATACA	-20	NA	84187072	84178378	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_84179852_84179945_84180084_84180169_84180345_84181042_84181187_84181327_84181464_84181591_84181664_84181745_84181864_84181941_84182059_84182201_84182441_84183071_84183150_84183243_84183334_84183409_84183508_84183696_84183779_84184850_84184990_84186900
transcript_78550.nic	chr16	-	3339	15	NIC	ENSG00000103168.17	novel	3847	15	NA	NA	1	370	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	86.2760164843519	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAATGGTCACGTTTTTT	-84182691	True	NA	0	True	AATACA	-20	NA	84187069	84178378	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_84179852_84179945_84180084_84180169_84180345_84181042_84181187_84181327_84181464_84181591_84181664_84181745_84181864_84181941_84182059_84182201_84182441_84183071_84183150_84183243_84183334_84183409_84183508_84183696_84183779_84184850_84185061_84186900
transcript_78556.nic	chr16	-	2969	15	NIC	ENSG00000103168.17	novel	3847	15	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	86.2760164843519	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTATATTCGCCTGAA	-84182691	True	NA	-8	True	AATACA	-18	NA	84187069	84178748	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_84179852_84179945_84180084_84180169_84180345_84181042_84181187_84181327_84181464_84181591_84181664_84181745_84181864_84181941_84182059_84182201_84182441_84183071_84183150_84183243_84183334_84183409_84183508_84183696_84183779_84184850_84185061_84186900
transcript_78566.nic	chr16	-	3991	14	NIC	ENSG00000103168.17	novel	3847	15	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_8	88.0776284822273	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGGGGAAAACTATGAT	-84182691	True	NA	-9	True	ATTAAA	-17	NA	84187069	84177854	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_84179852_84179945_84180084_84180169_84180345_84181042_84181187_84181327_84181664_84181745_84181864_84181941_84182059_84182201_84182441_84183071_84183150_84183243_84183334_84183409_84183508_84183696_84183779_84184850_84185061_84186900
transcript_7857.known	chr1	-	1066	8	FSM	ENSG00000178922.18	ENST00000372432.5	1066	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_6	6.94291593155592	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCATATGTCTCTGTA	-43453588	True	NA	-8	True	ATTAAA	-15	NA	43453963	43451157	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_43451312_43451427_43451545_43451647_43451718_43451797_43451848_43451934_43452014_43452204_43452320_43453385_43453498_43453594
transcript_7858.known	chr1	-	796	8	FSM	ENSG00000178922.18	ENST00000372433.5	796	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_6	14.7648230602334	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATATGTCTCTGTAATGG	-43453706	False	NA	-4	True	ATTAAA	-19	NA	43453716	43451153	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_43451312_43451427_43451545_43451647_43451718_43451797_43451848_43451934_43452014_43452204_43452320_43453412_43453498_43453594
transcript_78646.known	chr16	-	3847	15	FSM	ENSG00000103168.17	ENST00000566732.6	3847	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	86.2760164843519	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGGGGAAAACTATGAT	-84182679	True	NA	-9	True	ATTAAA	-17	NA	84187057	84177854	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_84179852_84179945_84180084_84180169_84180345_84181042_84181187_84181327_84181464_84181591_84181664_84181745_84181864_84181941_84182059_84182201_84182441_84183075_84183150_84183243_84183334_84183409_84183508_84183696_84183779_84184850_84185061_84186900
transcript_78647.known	chr16	-	3678	15	FSM	ENSG00000103168.17	ENST00000341690.10	3678	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	114.829176588175	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGGAAAACTATGATGCT	-84182671	True	NA	-6	True	ATTAAA	-20	NA	84187049	84177851	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_84179852_84179945_84180081_84180169_84180345_84181042_84181187_84181327_84181464_84181591_84181664_84181745_84181864_84181941_84182059_84182201_84182441_84183075_84183150_84183243_84183334_84183409_84183508_84183696_84183779_84184850_84184900_84186900
transcript_78648.known	chr16	-	4637	13	FSM	ENSG00000103168.17	ENST00000564774.5	4637	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	91.6610225535127	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGGGGAAAACTATGATG	-84182642	True	NA	-8	True	ATTAAA	-18	NA	84187020	84177853	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_84179852_84179945_84180084_84180169_84181187_84181327_84181664_84181745_84181864_84181941_84182059_84182201_84182441_84183075_84183150_84183243_84183334_84183409_84183508_84183696_84183779_84184850_84185061_84186900
transcript_78649.known	chr16	-	3879	14	FSM	ENSG00000103168.17	ENST00000567759.5	3879	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	89.4677886565919	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGGGGAAAACTATGAT	-84182633	True	NA	-9	True	ATTAAA	-17	NA	84187011	84177854	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_84179852_84179945_84180084_84180169_84180345_84181042_84181187_84181327_84181464_84181591_84181664_84181745_84182059_84182201_84182441_84183075_84183150_84183243_84183334_84183409_84183508_84183696_84183779_84184850_84185061_84186900
transcript_78650.known	chr16	-	3810	14	FSM	ENSG00000103168.17	ENST00000564208.5	3810	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	101.170545565104	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGGGGAAAACTATGATG	-84182674	True	NA	-8	True	ATTAAA	-18	NA	84187052	84177853	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_84179852_84179945_84180084_84180169_84180345_84181042_84181187_84181327_84181664_84181745_84181864_84181941_84182059_84182201_84182441_84183075_84183150_84183243_84183334_84183409_84183508_84183696_84183779_84184850_84184900_84186900
transcript_78652.known	chr16	+	2018	10	FSM	ENSG00000140955.11	ENST00000315906.10	2018	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.53859103528797	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTGTAGTTGGCTG	84191084	True	NA	3	True	AATAAA	-16	NA	84191156	84197166	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_84191649_84194441_84194583_84194932_84194981_84195068_84195195_84195295_84195447_84195529_84195698_84195814_84196045_84196126_84196371_84196646_84196768_84196869
transcript_78653.known	chr16	+	1295	7	FSM	ENSG00000103175.11	ENST00000219454.10	1295	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	1.63299316185545	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGAGTCTCTGGTGTTTT	84294849	False	NA	NA	False	AATAAA	-16	NA	84294877	84329844	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_84295116_84312960_84313154_84318271_84318356_84319430_84319572_84324418_84324461_84326881_84326956_84329321
transcript_78656.known	chr16	+	3374	27	FSM	ENSG00000064270.13	ENST00000262429.9	3374	27	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_26	4.04139087897798	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGATGTGTTTACCTAGG	84368242	True	NA	NA	False	AATAAA	-23	NA	84368537	84464187	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_84368715_84398498_84398610_84405127_84405245_84408404_84408495_84410567_84410604_84410703_84410766_84415482_84415592_84422389_84422540_84422628_84422698_84423187_84423264_84425734_84425802_84439165_84439291_84439426_84439525_84440856_84440959_84442509_84442600_84446328_84446431_84448532_84448690_84451920_84452092_84453137_84453236_84453320_84453372_84454817_84454985_84459119_84459189_84459269_84459387_84460653_84460802_84461713_84461813_84461987_84462130_84463613
transcript_7866.known	chr1	+	7720	34	FSM	ENSG00000142949.17	ENST00000359947.9	7720	34	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_14	210.70652933872	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGACTCTGTCTCAGCTG	43517884	True	NA	15	True	AATAAA	-26	NA	43530882	43623666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43531091_43538197_43538278_43545030_43545167_43553491_43553638_43553799_43553942_43569589_43569779_43578809_43578921_43588730_43589001_43590971_43591554_43591811_43591949_43592456_43592602_43597747_43598054_43598719_43598914_43602070_43602098_43603415_43603534_43603610_43604190_43604902_43605001_43605189_43605444_43605528_43605623_43606239_43606459_43606813_43606969_43609382_43609499_43613617_43613716_43617444_43617569_43617735_43617912_43618629_43618750_43619047_43619203_43619287_43619574_43619679_43619859_43620094_43620222_43620453_43620580_43620837_43620993_43621096_43621233_43621934
transcript_78666.known	chr16	-	1837	9	FSM	ENSG00000140950.16	ENST00000570036.5	1837	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	47.967274000093	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGTCCCACATGTGCCAA	-84503087	True	NA	NA	False	NA	NA	NA	84504690	84479790	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_84480027_84480528_84480709_84482591_84482711_84486630_84487060_84489277_84489423_84495682_84495914_84497418_84497648_84497933_84498112_84504600
transcript_78667.nnic	chr16	-	3471	9	NNC	ENSG00000140950.16	novel	1837	9	NA	NA	0	1647	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	47.5879120680872	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAATGTCCGTCAGTGTCT	-84503087	True	NA	NA	False	ATTAAA	-45	NA	84504690	84478049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_-_84480027_84480528_84480709_84482591_84482711_84486630_84487060_84489277_84489423_84495682_84495914_84497933_84498112_84502720_84502843_84504600
transcript_78668.nic	chr16	-	3475	9	NIC	ENSG00000140950.16	novel	1837	9	NA	NA	-15	1647	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	48.8262224629348	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAATGTCCGTCAGTGTCT	-84503071	True	NA	NA	False	ATTAAA	-45	NA	84504674	84478049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_84480027_84480528_84480709_84482591_84482711_84486630_84487060_84489277_84489423_84495682_84495914_84497933_84498112_84502720_84502863_84504600
transcript_78672.known	chr16	-	5013	8	FSM	ENSG00000140950.16	ENST00000343629.11	5013	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	43.2647285290672	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGACAAAAACTATATTTTG	-84503056	True	NA	NA	False	ATTAAA	-20	NA	84504659	84476354	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_84480027_84480528_84480709_84482591_84482711_84486630_84487060_84489277_84489423_84495682_84495914_84497933_84498112_84504600
transcript_78676.known	chr16	-	437	2	FSM	ENSG00000140950.16	ENST00000565701.1	437	2	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTAAACGCATCCCTCCCC	-84503026	True	NA	NA	False	NA	NA	NA	84504629	84497703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_84498112_84504600
transcript_78678.known	chr16	-	1842	4	FSM	ENSG00000103187.8	ENST00000262428.5	1842	4	0	0	0	0	multi-exon	FALSE	canonical	3	733	junction_3	79.4243175747971	1177	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGGTTTCTGATTTGT	-84599488	True	NA	-2	True	AATAAA	-24	NA	84618078	84565595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_84566956_84590104_84590263_84617500_84617584_84617837
transcript_78687.known	chr16	+	7559	5	FSM	ENSG00000135686.13	ENST00000564996.6	7559	5	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	17.1901134376711	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGACTTCCTTTTGGTGTT	84647153	True	NA	10	True	AATATA	-14	NA	84648510	84667686	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_84648650_84650851_84650931_84656870_84657945_84659759_84659918_84661577
transcript_7869.known	chr1	+	6377	33	FSM	ENSG00000142949.17	ENST00000438120.5	6377	33	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_10	120.054788924682	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTAGCCTCTTCCCTCT	43517891	True	NA	4	True	AATACA	-21	NA	43530889	43622357	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43531091_43538197_43538278_43545030_43545167_43553491_43553638_43553799_43553942_43569589_43569779_43578809_43578921_43588730_43589001_43590971_43591554_43591811_43591949_43592456_43592602_43597747_43598054_43598719_43598914_43603415_43603534_43603610_43604190_43604902_43605001_43605189_43605444_43605528_43605623_43606239_43606459_43606813_43606969_43609382_43609499_43613617_43613716_43617444_43617569_43617735_43617912_43618629_43618750_43619047_43619203_43619287_43619574_43619679_43619859_43620094_43620222_43620453_43620580_43620837_43620993_43621096_43621233_43621934
transcript_78694.nic	chr16	+	2399	3	ISM	ENSG00000135686.13	ENST00000258157.9	1974	4	-87	3326	-63	1834	5prime_fragment	FALSE	canonical	3	98	junction_1	22.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGCTCTTCTACTTTTTG	NA	False	NA	NA	False	AAAAAG	-11	NA	84648447	84658988	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_84648650_84650851_84650931_84656870
transcript_78695.known	chr16	+	585	3	FSM	ENSG00000135686.13	ENST00000567410.5	585	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	55.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGTGGTGGACTTCCTGT	84647254	True	NA	NA	False	NA	NA	NA	84648611	84657100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_84648888_84650851_84650931_84656870
transcript_78696.known	chr16	+	1974	4	FSM	ENSG00000135686.13	ENST00000258157.9	1974	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_3	57.0165667932478	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGCTTGAATAACTAACC	84647177	True	NA	20	True	ATTAAA	-22	NA	84648534	84662314	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_84648650_84650851_84650931_84656870_84657914_84661577
transcript_78711.known	chr16	+	2717	15	FSM	ENSG00000103194.16	ENST00000570191.5	2717	15	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	484.729342741169	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGGGCTAGAATGAAA	84678761	True	NA	NA	False	NA	NA	NA	84700003	84779194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_84700112_84704739_84704861_84733434_84733504_84740308_84740370_84744632_84745674_84758715_84758808_84759362_84759473_84759890_84759947_84760171_84760276_84762988_84763089_84764085_84764264_84768192_84768359_84772540_84772686_84775159_84775226_84778894
transcript_78730.known	chr16	+	3328	14	FSM	ENSG00000103194.16	ENST00000219473.12	3328	14	0	0	0	0	multi-exon	FALSE	canonical	3	1244	junction_4	129.575958395386	1893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGTGCGTGTTTCTTTG	84678757	True	NA	17	True	AATAAA	-21	NA	84699999	84779922	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_84700112_84733434_84733504_84740308_84740370_84744632_84745674_84758715_84758808_84759362_84759473_84759890_84759947_84760171_84760276_84762988_84763089_84764085_84764264_84768192_84768359_84772540_84772686_84775159_84775226_84778894
transcript_78751.nic	chr16	+	2998	13	NIC	ENSG00000103194.16	novel	3328	14	NA	NA	-53	280	combination_of_known_junctions	FALSE	canonical	3	108	junction_2	389.503922387895	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTGCTGGTTCCTAACA	84678690	True	NA	NA	False	AATAAA	-10	NA	84699932	84779586	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_84700112_84733434_84733504_84744632_84745674_84758715_84758808_84759362_84759473_84759890_84759947_84760171_84760276_84762988_84763089_84764085_84764264_84768192_84768359_84772540_84772686_84775159_84775226_84778894
transcript_78772.known	chr16	+	1315	12	FSM	ENSG00000103194.16	ENST00000563048.5	1315	12	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	418.126359958999	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGTGAAACCAACTGCTG	84678761	True	NA	NA	False	NA	NA	NA	84700003	84779015	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_84700112_84733434_84733504_84758715_84758808_84759362_84759473_84759890_84759947_84760171_84760276_84762988_84763089_84764085_84764264_84768192_84768359_84772540_84772686_84775159_84775226_84778894
transcript_78812.known	chr16	+	888	5	FSM	ENSG00000103194.16	ENST00000562743.5	888	5	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	665.262730054826	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCCCCGGGGCTGATTTT	84678743	True	NA	NA	False	NA	NA	NA	84699985	84745211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_84700112_84733052_84733106_84733434_84733504_84740308_84740370_84744632
transcript_78816.known	chr16	+	569	5	FSM	ENSG00000103194.16	ENST00000562283.5	569	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	694.018911846068	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGCGTAAAAAGAAGAAAAAG	84678761	True	NA	NA	False	NA	NA	NA	84700003	84744923	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_84700112_84733052_84733106_84733447_84733504_84740308_84740370_84744632
transcript_78818.known	chr16	+	2178	15	FSM	ENSG00000103196.12	ENST00000567845.5	2178	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	6.48860854238615	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAATAAAAAACACAGTC	84819885	False	NA	NA	False	AATGAA	-17	NA	84819990	84907112	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_84820134_84838421_84838736_84845785_84845905_84849384_84849518_84850567_84850684_84854728_84854830_84866899_84867041_84868850_84868912_84872441_84872509_84872991_84873123_84873919_84873964_84877437_84877511_84880508_84880585_84889229_84889364_84906587
transcript_7882.known	chr1	+	2168	8	FSM	ENSG00000142949.17	ENST00000436724.5	2168	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	306.764551074465	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAACTGTCTCCACCCAG	43517904	True	NA	NA	False	NA	NA	NA	43530902	43580078	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43531091_43538197_43538278_43545030_43545167_43553491_43553638_43553799_43553942_43569589_43569779_43575909_43575928_43578809
transcript_78821.nic	chr16	+	4360	14	NIC	ENSG00000103196.12	novel	1123	9	NA	NA	23	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	3.98369457729971	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCAGGCTCTGGACTGT	84841856	True	NA	4	True	AATAAA	-14	NA	84842025	84909508	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_84842266_84845785_84845905_84849384_84849518_84850567_84850684_84854728_84854830_84866896_84867041_84868850_84868912_84872441_84872509_84872991_84873123_84873919_84873964_84877437_84877511_84880508_84880585_84889229_84889364_84906587
transcript_78822.known	chr16	+	1689	10	FSM	ENSG00000103196.12	ENST00000569262.5	1689	10	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	6.68331255192114	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAACAAAAAAAAAA	84819911	False	NA	NA	False	AAAAAG	-17	NA	84820016	84873508	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_84820134_84838421_84838736_84845785_84845905_84849384_84849518_84850567_84850684_84854728_84854830_84866896_84867041_84868850_84868912_84872441_84872509_84872991
transcript_7883.known	chr1	+	1129	8	FSM	ENSG00000142949.17	ENST00000617451.4	1129	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	234.886511893271	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCATGCATACCTGGCCTG	43517877	True	NA	NA	False	NA	NA	NA	43530875	43579285	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43531091_43538197_43538278_43545030_43545167_43553491_43553638_43553799_43553942_43569589_43569779_43578809_43578921_43579175
transcript_78830.known	chr16	-	1488	9	FSM	ENSG00000153786.13	ENST00000564466.5	1488	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	92.019614077652	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTTTTATATATTTATA	-85006936	True	NA	NA	False	NA	NA	NA	85011502	84976212	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_84976520_84977094_84977226_84977923_84978006_84979188_84979286_84981869_84981995_84988762_84988874_84990303_84990636_84995921_84996008_85011285
transcript_78836.known	chr16	-	3448	8	FSM	ENSG00000153786.13	ENST00000313732.9	3448	8	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_4	19.1289928471663	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAGAATCTCAAGTACCT	-85006969	True	NA	NA	False	AATAAA	-24	NA	85011535	84974174	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_84976520_84977094_84977226_84977923_84978006_84979188_84979286_84981869_84981995_84990303_84990636_84995921_84996008_85011285
transcript_7884.nic	chr1	+	2057	8	ISM	ENSG00000142949.17	ENST00000438120.5	6377	33	-66	32641	-52	-1402	5prime_fragment	FALSE	canonical	3	600	junction_7	40.8531466577146	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCATGGTGGCACACAC	43530783	False	NA	NA	False	NA	NA	NA	43530823	43589716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_43531091_43538197_43538278_43545030_43545167_43553491_43553638_43553799_43553942_43569589_43569779_43578809_43578921_43588730
transcript_78847.known	chr16	+	7381	12	FSM	ENSG00000135709.14	ENST00000538274.6	7360	12	-31	10	-31	2	multi-exon	FALSE	canonical	2	4	junction_11	7.98241869764189	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTCTGTTTAA	85027293	True	NA	NA	False	AATAAA	-9	NA	85027750	85094220	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_85027859_85066899_85067401_85071782_85071883_85072924_85072999_85075843_85075915_85077424_85077633_85078414_85078456_85078924_85079004_85081314_85081393_85086643_85086725_85087071_85087167_85088275
transcript_78854.nic	chr16	+	1889	8	ISM	ENSG00000135709.14	ENST00000683363.1	7365	13	0	14464	0	0	5prime_fragment	FALSE	canonical	3	19	junction_1	3.37457480314792	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATGTTTTAGAGGGTGA	85027337	True	NA	9	True	AATACA	-16	NA	85027794	85079754	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_85027859_85066899_85067401_85071782_85071883_85072924_85072999_85075843_85075915_85077424_85077633_85078414_85078456_85078924
transcript_78856.nic	chr16	+	3006	8	ISM	ENSG00000135709.14	ENST00000538274.6	7360	12	-41	13413	-41	1063	5prime_fragment	FALSE	canonical	3	19	junction_1	3.37457480314792	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAATGTTTTTTTCCTTG	85027283	True	NA	NA	False	AATAAA	-14	NA	85027740	85080817	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_85027859_85066899_85067401_85071782_85071883_85072924_85072999_85075843_85075915_85077424_85077633_85078414_85078456_85078924
transcript_78865.known	chr16	+	7385	16	FSM	ENSG00000131149.19	ENST00000253458.12	7385	16	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	36.7711239365287	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAAGAGGAAAATCTTTT	85610408	True	NA	8	True	AATAAA	-15	NA	85613321	85676200	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_85613399_85633913_85634133_85648551_85648752_85654277_85654451_85654793_85654992_85655725_85655918_85656342_85656666_85657276_85657605_85661145_85661766_85662980_85663094_85663343_85663615_85665014_85665129_85665975_85666348_85668139_85668425_85670994_85671099_85672404
transcript_78872.known	chr16	+	4366	15	FSM	ENSG00000131149.19	ENST00000405402.6	4366	15	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_1	45.6202716308602	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGTTTTTATTACTTTA	85610594	True	NA	12	True	ATTAAA	-16	NA	85611408	85673354	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_85611532_85648551_85648752_85654277_85654451_85654793_85654992_85655725_85655918_85656342_85656666_85657276_85657605_85661145_85661766_85662980_85663094_85663343_85663615_85665014_85665129_85665975_85666348_85668139_85668425_85670994_85671099_85672404
transcript_78874.known	chr16	+	7140	15	FSM	ENSG00000131149.19	ENST00000393243.5	7140	15	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	44.0319920799708	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGGAAAATCTTTTTTAT	85610438	False	NA	12	True	AATAAA	-19	NA	85613351	85676204	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_85613399_85648551_85648752_85654277_85654451_85654793_85654992_85655725_85655918_85656342_85656666_85657276_85657605_85661145_85661766_85662980_85663094_85663343_85663615_85665014_85665129_85665975_85666348_85668139_85668425_85670994_85671099_85672404
transcript_78885.known	chr16	-	2628	5	FSM	ENSG00000131153.9	ENST00000253462.8	2628	5	0	0	0	0	multi-exon	FALSE	canonical	3	950	junction_4	34.4310906013736	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGGAAGATTTTATTTTT	-85677421	True	NA	0	True	CATAAA	-23	NA	85688954	85676197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_85678338_85678539_85678667_85681581_85681682_85687459_85687575_85688808
transcript_78887.known	chr16	-	832	5	FSM	ENSG00000154102.11	ENST00000602766.1	832	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	44.1163235095582	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGCCATAAGCACCAACAAG	-85750491	True	NA	-50	True	NA	NA	NA	85751112	85707653	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_85708067_85710163_85710286_85710409_85710474_85735189_85735236_85750925
transcript_78888.known	chr16	-	744	4	FSM	ENSG00000154102.11	ENST00000602675.5	744	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	31.5629881700422	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGAATCCTTTTTTTTTT	-85750330	False	NA	87	True	AATAAA	-17	NA	85750951	85707516	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_85708067_85710163_85710286_85735189_85735236_85750925
transcript_78889.known	chr16	-	911	4	FSM	ENSG00000154102.11	ENST00000284245.9	911	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	22.69116323349	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGAATCCTTTTTTTTTT	-85750475	True	NA	87	True	AATAAA	-17	NA	85751096	85707516	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_85708067_85710163_85710308_85735189_85735236_85750925
transcript_7889.known	chr1	+	2388	13	FSM	ENSG00000126091.21	ENST00000351035.8	2388	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	12.8225062552789	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATAAAGCTCTTCCCTGA	43706924	True	NA	-16	True	NA	NA	NA	43707543	43931139	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43707694_43736232_43736381_43792101_43792150_43814890_43814934_43824730_43824893_43838218_43838312_43894382_43894478_43898234_43898299_43899167_43899264_43899540_43899728_43920403_43920551_43920781_43920929_43930131
transcript_78892.known	chr16	-	761	3	FSM	ENSG00000154102.11	ENST00000602914.1	761	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	37	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCTCTGTAACAAATAGTG	-85750484	True	NA	72	True	AATAAA	-2	NA	85751105	85707531	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_85708067_85735189_85735236_85750925
transcript_78897.known	chr16	+	763	5	FSM	ENSG00000131143.10	ENST00000253452.8	763	5	0	0	0	0	multi-exon	FALSE	canonical	3	4946	junction_1	732.250298736709	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTCTGGAGTAAATATATT	85727304	True	NA	3	True	ATTAAA	-19	NA	85799694	85807068	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_85799753_85801204_85801279_85804936_85805105_85805732_85805865_85806737
transcript_78900.known	chr16	+	873	5	FSM	ENSG00000131143.10	ENST00000562336.5	873	5	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_1	2722.21164680485	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAACAATAGGTTTCTC	85727302	True	NA	-21	True	AATGAA	-6	NA	85799692	85807044	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_85799885_85801204_85801279_85804936_85805105_85805732_85805865_85806737
transcript_78902.known	chr16	-	1966	5	FSM	ENSG00000131148.9	ENST00000253457.8	1966	5	0	0	0	0	multi-exon	FALSE	canonical	3	659	junction_3	15.0582203463756	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTCTTCCCCTTTCTTC	-85791658	True	NA	0	True	AATAAA	-24	NA	85799544	85778623	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_85779868_85780378_85780474_85781210_85781281_85788973_85789051_85799064
transcript_78906.known	chr16	+	2271	3	FSM	ENSG00000131143.10	ENST00000568339.5	2271	3	0	0	0	0	multi-exon	FALSE	canonical	3	4946	junction_1	627.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTGATCAGTTCTTT	85727231	True	NA	30	True	AATAAA	-19	NA	85799621	85807002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_85799753_85801204_85801279_85804936
transcript_78908.known	chr16	-	486	2	FSM	ENSG00000131148.9	ENST00000596852.1	486	2	0	0	0	0	multi-exon	FALSE	canonical	3	675	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAGATACGAAACCTGTGA	-85799375	False	NA	NA	False	NA	NA	NA	85799396	85788896	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_85789051_85799064
transcript_78909.known	chr16	+	716	5	FSM	ENSG00000131143.10	ENST00000561569.5	716	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	2795.26877061938	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTGATCAGTTCTTT	85727306	True	NA	30	True	AATAAA	-19	NA	85799696	85807002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_85799753_85801183_85801279_85804936_85805105_85805732_85805865_85806737
transcript_7891.known	chr1	+	2422	13	FSM	ENSG00000126091.21	ENST00000643252.1	2422	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	14.046549596095	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATGGAAGCAATAAAGCTC	43706916	True	NA	-24	True	NA	NA	NA	43707535	43931131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43707694_43736232_43736381_43792101_43792150_43814890_43814934_43838218_43838312_43894382_43894478_43898234_43898299_43899167_43899264_43899540_43899728_43920403_43920551_43920781_43920929_43921442_43921639_43930131
transcript_78910.known	chr16	+	490	5	FSM	ENSG00000131143.10	ENST00000566405.5	490	5	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_2	2623.9798374797	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATGAAGGTGAACCCCAT	85727307	True	NA	NA	False	NA	NA	NA	85799697	85806802	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_85799753_85801204_85801279_85804940_85805105_85805732_85805865_85806737
transcript_78911.known	chr16	+	2668	9	FSM	ENSG00000140968.11	ENST00000268638.10	2668	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2.11763429326218	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTGTACTGTATTTT	85899052	True	NA	10	True	AATAAA	-16	NA	85899161	85922606	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_85899224_85903014_85903190_85908989_85909174_85911569_85911659_85913130_85913237_85914472_85914521_85918416_85918804_85920108_85920225_85921105
transcript_78914.known	chr16	-	2451	9	FSM	ENSG00000103248.19	ENST00000546093.5	2451	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	21.2117302453147	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTGGCCCTGGGCCCTC	-86554562	True	NA	0	True	AATAAA	-30	NA	86555235	86530832	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_86532482_86541696_86541823_86542100_86542214_86546558_86546650_86548034_86548112_86548463_86548578_86552178_86552293_86554644_86554749_86555172
transcript_78916.known	chr16	-	1207	8	FSM	ENSG00000103248.19	ENST00000634347.1	1207	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	10.1136400116731	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGTCCCCTGCCGCTCCG	-86554530	True	NA	NA	False	NA	NA	NA	86555203	86531971	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_86532482_86541696_86541823_86542100_86542214_86546558_86546650_86548463_86548578_86552032_86552147_86554644_86554749_86555168
transcript_78918.known	chr16	-	3028	8	FSM	ENSG00000103248.19	ENST00000360900.11	3028	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	8.92371296385224	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCTGCACACCTTTCAC	-86554562	True	NA	-9	True	AATAAA	-15	NA	86555235	86530185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_86532482_86541696_86541823_86542100_86542214_86546558_86546650_86548463_86548578_86552032_86552147_86554644_86554752_86555168
transcript_78919.known	chr16	-	1207	8	FSM	ENSG00000103248.19	ENST00000543303.6	1207	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	14.9447963778537	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGTCCCCTGCCGCTCCG	-86554530	True	NA	NA	False	NA	NA	NA	86555203	86531971	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_86532482_86541696_86541823_86542100_86542214_86546558_86546650_86548463_86548578_86552178_86552293_86554644_86554749_86555168
transcript_7892.known	chr1	+	2354	13	FSM	ENSG00000126091.21	ENST00000647148.1	2354	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	14.046549596095	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGAGCCTGGCCTCTT	43706935	True	NA	-4	True	AATAAA	-5	NA	43707554	43931151	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43707694_43736232_43736381_43792101_43792150_43814890_43814934_43838218_43838312_43894382_43894478_43898234_43898299_43899167_43899264_43899540_43899728_43920403_43920551_43920781_43920929_43921511_43921639_43930131
transcript_78920.known	chr16	-	1210	8	FSM	ENSG00000103248.19	ENST00000381214.9	1210	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	14.4518906326177	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGTCCCCTGCCGCTCCG	-86554530	True	NA	NA	False	NA	NA	NA	86555203	86531971	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_86532482_86541696_86541823_86542100_86542214_86546558_86546650_86548463_86548578_86552178_86552293_86554644_86554752_86555168
transcript_78926.known	chr16	+	1161	2	FSM	ENSG00000261175.6	ENST00000647896.1	1161	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTACTGCACGTCACTCT	86734625	True	NA	NA	False	NA	NA	NA	86734798	86738459	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_86734910_86737409
transcript_78929.known	chr16	-	974	5	FSM	ENSG00000260456.7	ENST00000618367.4	974	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	17.8675683852056	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGATGACCTCTGATTTC	-87316759	True	NA	12	True	AATAAA	-35	NA	87317420	87302800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_87303076_87305718_87305906_87314970_87315097_87315771_87315824_87317086
transcript_78930.known	chr16	-	1113	7	FSM	ENSG00000260456.7	ENST00000567970.2	1113	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	25.6866805086908	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCCACCTCTTAAATGAT	-87316731	True	NA	-1	True	AATAAA	-22	NA	87317392	87302813	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_87303076_87305718_87305906_87310296_87310334_87311149_87311297_87314970_87315097_87315771_87315824_87317090
transcript_78938.nic	chr16	-	2087	12	Fusion	ENSG00000260456.7_ENSG00000103264.18	novel	1113	7	NA	NA	-31	0	multi-exon	FALSE	canonical	2	10	junction_4	16.5933373067387	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCCACCTCTTAAATGAT	-87382494	True	NA	-1	True	AATAAA	-22	NA	87383807	87302813	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr16_-_87303076_87305718_87305906_87314970_87315097_87315771_87315824_87333885_87334287_87335303_87335458_87336154_87336265_87342876_87342952_87343597_87343766_87347173_87347251_87360294_87360367_87383404
transcript_78944.known	chr16	-	5953	9	FSM	ENSG00000103264.18	ENST00000311635.12	5953	9	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_4	6.42261628933256	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTGTTTTGTGATTT	-87382463	True	NA	-1	True	AGTAAA	-17	NA	87383776	87326986	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_87331511_87333885_87334287_87335303_87335458_87336154_87336265_87342876_87342952_87343597_87343766_87347173_87347251_87360294_87360367_87383404
transcript_78952.known	chr16	+	1259	5	FSM	ENSG00000140941.14	ENST00000570189.5	1259	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	469.814524573262	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGAAACTTGAATAATTT	87387083	True	NA	NA	False	CATAAA	-12	NA	87392316	87403778	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_87392468_87398814_87398871_87399597_87399687_87402174_87402282_87402922
transcript_78953.known	chr16	+	2147	4	FSM	ENSG00000140941.14	ENST00000268607.10	2147	4	0	0	0	0	multi-exon	FALSE	canonical	3	943	junction_3	7.58653778449403	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGCCCAGTTTAATGGG	87387102	True	NA	14	True	AATAAA	-21	NA	87392335	87404774	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_87392468_87398814_87398871_87402174_87402282_87402922
transcript_78955.known	chr16	+	401	2	FSM	ENSG00000270006.3	ENST00000602282.3	417	2	16	0	9	0	multi-exon	FALSE	canonical	2	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTATGTTCTTTAAGTTA	87317337	True	NA	9	True	AGTAAA	-22	NA	87317508	87318043	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_87317723_87317856
transcript_78958.known	chr16	-	6242	14	FSM	ENSG00000140948.13	ENST00000568020.6	6242	14	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_13	4.06456763496089	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGGCTGTTTTATTTC	-87490089	False	NA	-20	True	AATAAA	-7	NA	87491859	87406256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_87407015_87407677_87410336_87411515_87412977_87413054_87413196_87414413_87414542_87415275_87415368_87417459_87417743_87418846_87418902_87419782_87419878_87420606_87420717_87423809_87423882_87433127_87433202_87460007_87460132_87491668
transcript_78959.known	chr16	-	2548	10	FSM	ENSG00000140948.13	ENST00000561928.1	2548	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	3.55902608401044	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCGAATGCTCTTTGAA	-87433124	True	NA	NA	False	AGTAAA	-25	NA	87433134	87411411	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_87412977_87413054_87413196_87414413_87414542_87415275_87415368_87417459_87417743_87418846_87418902_87419782_87419878_87420606_87420717_87423809_87423882_87433127
transcript_7896.known	chr1	+	2254	12	FSM	ENSG00000126091.21	ENST00000347631.8	2254	12	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	5.68890467169528	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCCTCTTTTTGCCTT	43706916	True	NA	4	True	AATAAA	-13	NA	43707535	43931159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43707694_43736232_43736381_43792101_43792150_43814890_43814934_43838218_43838312_43894382_43894478_43898234_43898299_43899167_43899264_43899540_43899728_43920403_43920551_43920781_43920929_43930131
transcript_78962.known	chr16	-	1663	10	FSM	ENSG00000104731.14	ENST00000353170.9	1663	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	56.239566933689	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCGCGGAGGGTGTCTTC	-87761684	True	NA	NA	False	AATAAA	-18	NA	87765899	87707811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_87708073_87708349_87708467_87709264_87709668_87711234_87711444_87714497_87714574_87726764_87726925_87730551_87730645_87748672_87748810_87755193_87755293_87765791
transcript_78963.known	chr16	+	1030	2	FSM	ENSG00000154118.13	ENST00000301008.5	1030	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGTGCTCTAGTCCTCCC	87602738	True	NA	3	True	AATAAA	-13	NA	87602886	87604627	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_87603529_87604239
transcript_78964.known	chr16	-	1924	12	FSM	ENSG00000104731.14	ENST00000270583.10	1924	12	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_7	23.5887632585118	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCGCGGAGGGTGTCTTC	-87761771	True	NA	NA	False	AATAAA	-18	NA	87765986	87707811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_87708076_87708349_87708467_87709264_87709668_87711234_87711444_87714497_87714574_87726764_87726925_87730551_87730645_87748672_87748810_87755193_87755293_87756398_87756478_87761948_87762041_87765791
transcript_78965.known	chr16	-	1757	11	FSM	ENSG00000104731.14	ENST00000562155.5	1757	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	53.8506267372999	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAAATAAATTGGACTTG	-87761714	True	NA	NA	False	NA	NA	NA	87765929	87707839	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_87708073_87708349_87708467_87709264_87709668_87711234_87711444_87714497_87714574_87726764_87726925_87730551_87730645_87748672_87748810_87755193_87755293_87761948_87762041_87765791
transcript_78966.known	chr16	-	1821	11	FSM	ENSG00000104731.14	ENST00000347925.9	1821	11	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_6	43.952246814014	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCGCGGAGGGTGTCTTC	-87761761	True	NA	NA	False	AATAAA	-18	NA	87765976	87707811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_87708076_87708349_87708467_87709264_87709668_87711234_87711444_87714497_87714574_87726764_87726925_87748672_87748810_87755193_87755293_87756398_87756478_87761948_87762041_87765791
transcript_78969.known	chr16	-	4556	10	FSM	ENSG00000103257.9	ENST00000261622.5	4556	10	0	0	0	0	multi-exon	FALSE	canonical	3	1052	junction_1	39.0795327063056	2214	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGATGTTCTGTGTTCT	-87856343	True	NA	-8	True	AAGAAA	-16	NA	87869507	87830022	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_87833026_87834413_87834592_87836497_87836648_87837844_87837942_87838713_87838818_87839701_87839826_87840428_87840474_87841049_87841156_87851723_87851850_87868884
transcript_7897.known	chr1	+	2109	12	FSM	ENSG00000126091.21	ENST00000372372.7	2109	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	14.4554030620371	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAGAAAGAACTTTAAAGC	43706907	True	NA	NA	False	NA	NA	NA	43707526	43930891	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43707694_43736232_43736381_43814890_43814934_43824730_43824893_43838218_43838312_43894382_43894478_43898234_43898299_43899167_43899264_43899540_43899728_43920403_43920551_43920781_43920929_43930131
transcript_7898.known	chr1	+	2242	12	FSM	ENSG00000126091.21	ENST00000643283.1	2242	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	13.5341624683247	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTGAGGCCCAAGGAGC	43706923	True	NA	-78	True	NA	NA	NA	43707542	43931077	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43707694_43736232_43736426_43792101_43792150_43814890_43814934_43838218_43838312_43894382_43894478_43898234_43898299_43899167_43899264_43899508_43899728_43920403_43920551_43920781_43920929_43930131
transcript_7899.known	chr1	+	2297	12	FSM	ENSG00000126091.21	ENST00000361392.9	2297	12	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_2	10.7626535177809	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCCTCTTTTTGCCTT	43706918	True	NA	4	True	AATAAA	-13	NA	43707537	43931159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43707694_43736232_43736426_43792101_43792150_43814890_43814934_43838218_43838312_43894382_43894478_43898234_43898299_43899167_43899264_43899540_43899728_43920403_43920551_43920781_43920929_43930131
transcript_78999.known	chr16	+	2398	14	FSM	ENSG00000172530.21	ENST00000682872.1	2398	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_9	37.0892095825136	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGCCTTACGCTTTTCC	87949501	True	NA	15	True	AATAAA	-16	NA	87951433	88077316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_87951516_87975047_87975186_87981035_87981128_87984059_87984260_88004294_88004412_88006089_88006266_88018427_88018668_88027482_88027651_88033108_88033246_88035322_88035395_88037972_88038012_88065266_88065333_88072068_88072213_88076589
transcript_79.known	SIRV1	-	1300	4	FSM	SIRV1A	SIRV102	1300	4	0	0	0	0	multi-exon	FALSE	canonical	3	4783	junction_1	1017.87261809456	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTGAATCGATGCATAC	NA	False	NA	NA	False	NA	NA	NA	10366	1006	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV1_-_1485_6337_6814_7552_7815_10282
transcript_7900.known	chr1	+	2212	11	FSM	ENSG00000126091.21	ENST00000361400.9	2212	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	10.3754517973918	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTCTTTTTGCCTTCTC	43706913	True	NA	7	True	AATAAA	-16	NA	43707532	43931162	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43707694_43736232_43736381_43814890_43814934_43838218_43838312_43894382_43894478_43898234_43898299_43899167_43899264_43899540_43899728_43920403_43920551_43920781_43920929_43930131
transcript_79001.nic	chr16	+	2230	14	NIC	ENSG00000172530.21	novel	2398	14	NA	NA	-134	-185	combination_of_known_junctions	FALSE	canonical	3	36	junction_11	29.2184184433614	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAGGGGAGTAGCAGGAG	87951280	False	NA	21	True	AAAAAG	-19	NA	87951297	88077021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_87951516_87975047_87975186_87981035_87981128_87984059_87984260_88004294_88004412_88006089_88006266_88018427_88018668_88027482_88027651_88033108_88033246_88035331_88035395_88037972_88038012_88065266_88065333_88072068_88072213_88076589
transcript_79002.nic	chr16	+	2389	14	NIC	ENSG00000172530.21	novel	2398	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_11	29.2184184433614	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGCCTTACGCTTTTCC	87949501	True	NA	15	True	AATAAA	-16	NA	87951433	88077316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_87951516_87975047_87975186_87981035_87981128_87984059_87984260_88004294_88004412_88006089_88006266_88018427_88018668_88027482_88027651_88033108_88033246_88035331_88035395_88037972_88038012_88065266_88065333_88072068_88072213_88076589
transcript_7901.known	chr1	+	1942	10	FSM	ENSG00000126091.21	ENST00000353126.8	1942	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_9	10.6469725599044	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTTCCCTGAGCCTGGC	43706921	True	NA	-9	True	NA	NA	NA	43707540	43931146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43707694_43736232_43736381_43792101_43792150_43814890_43814934_43838218_43838312_43894382_43894478_43898234_43898299_43899167_43899264_43899540_43899728_43930131
transcript_79011.nic	chr16	+	2039	13	NIC	ENSG00000172530.21	novel	2398	14	NA	NA	0	-185	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_9	33.0374366775363	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAGGGGAGTAGCAGGAG	87949499	True	NA	21	True	AAAAAG	-19	NA	87951431	88077021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_87951516_87975047_87975186_87981035_87981128_87984059_87984260_88004294_88004412_88006089_88006266_88018427_88018668_88027482_88027651_88033108_88033246_88035322_88035395_88037972_88038012_88072068_88072213_88076589
transcript_79012.nic	chr16	+	2334	13	NIC	ENSG00000172530.21	novel	2398	14	NA	NA	0	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_9	33.0374366775363	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGCCTTACGCTTTTCC	87949499	True	NA	15	True	AATAAA	-16	NA	87951431	88077316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_87951516_87975047_87975186_87981035_87981128_87984059_87984260_88004294_88004412_88006089_88006266_88018427_88018668_88027482_88027651_88033108_88033246_88035322_88035395_88037972_88038012_88072068_88072213_88076589
transcript_79013.nic	chr16	+	2032	13	NIC	ENSG00000172530.21	novel	2398	14	NA	NA	-2	-185	combination_of_known_junctions	FALSE	canonical	3	63	junction_9	21.2464049246507	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAGGGGAGTAGCAGGAG	87949497	True	NA	21	True	AAAAAG	-19	NA	87951429	88077021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_87951516_87975047_87975186_87981035_87981128_87984059_87984260_88004294_88004412_88006089_88006266_88018427_88018668_88027482_88027651_88033108_88033246_88035331_88035395_88037972_88038012_88072068_88072213_88076589
transcript_79014.nic	chr16	+	2325	13	NIC	ENSG00000172530.21	novel	2398	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_9	21.2464049246507	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGCCTTACGCTTTTCC	87949499	True	NA	15	True	AATAAA	-16	NA	87951431	88077316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_87951516_87975047_87975186_87981035_87981128_87984059_87984260_88004294_88004412_88006089_88006266_88018427_88018668_88027482_88027651_88033108_88033246_88035331_88035395_88037972_88038012_88072068_88072213_88076589
transcript_79015.known	chr16	+	2144	13	FSM	ENSG00000172530.21	ENST00000626016.2	2144	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_8	44.6794136040302	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCAGCTCTCGGTTCCG	87949546	True	NA	-95	True	NA	NA	NA	87951478	88077206	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_87951516_87975047_87975204_87981035_87981128_87984059_87984260_88006089_88006266_88018427_88018668_88027482_88027651_88033108_88033246_88035322_88035395_88037972_88038012_88065266_88065333_88072068_88072213_88076589
transcript_79018.nic	chr16	+	2276	13	NIC	ENSG00000172530.21	novel	2398	14	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_10	32.6150740541173	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGCCTTACGCTTTTCC	87949497	True	NA	15	True	AATAAA	-16	NA	87951429	88077316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_87951516_87975047_87975186_87981035_87981128_87984059_87984260_88006089_88006266_88018427_88018668_88027482_88027651_88033108_88033246_88035331_88035395_88037972_88038012_88065266_88065333_88072068_88072213_88076589
transcript_79023.known	chr16	+	2164	12	FSM	ENSG00000172530.21	ENST00000355022.8	2164	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_8	36.6757063737909	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCTTACGCTTTTCCTC	87949554	True	NA	17	True	AATAAA	-18	NA	87951486	88077318	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_87951516_87975047_87975186_87981035_87981128_87984059_87984260_88006089_88006266_88018427_88018668_88027482_88027651_88033108_88033246_88035322_88035395_88037972_88038012_88072068_88072213_88076589
transcript_79025.known	chr16	+	1551	12	FSM	ENSG00000172530.21	ENST00000479780.6	1551	12	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	25.5057925684628	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGTGCCCATGGCACCAGG	87949501	True	NA	NA	False	NA	NA	NA	87951433	88076661	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_87951516_87975047_87975186_87981035_87981128_87984059_87984260_88006089_88006266_88018427_88018668_88027482_88027651_88033108_88033246_88035331_88035395_88037972_88038012_88072068_88072213_88076589
transcript_79046.known	chr16	+	3211	19	FSM	ENSG00000158545.16	ENST00000452588.6	3211	19	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	66.9880217779895	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGTAAAAAAGAAAAAA	88564942	True	NA	NA	False	NA	NA	NA	88570402	88631398	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_88570567_88577109_88577727_88586599_88586685_88587541_88587614_88598177_88598327_88598619_88598713_88599790_88599949_88608933_88609052_88611267_88611537_88622196_88622389_88623218_88623345_88623957_88624063_88624601_88624746_88625201_88625268_88627621_88627783_88627919_88628120_88628757_88628855_88630484_88630582_88631100
transcript_79057.known	chr16	+	3705	18	FSM	ENSG00000158545.16	ENST00000301011.10	3705	18	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_7	34.2680255902594	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTCCTTGCCCTCGTGGT	88564942	True	NA	15	True	AATAAA	-16	NA	88570402	88631964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_88570567_88577109_88577727_88586599_88586685_88598177_88598327_88598619_88598713_88599790_88599949_88608933_88609052_88611267_88611537_88622196_88622389_88623218_88623345_88623957_88624063_88624601_88624746_88625201_88625268_88627621_88627783_88627919_88628120_88628757_88628855_88630484_88630582_88631100
transcript_79083.nic	chr16	+	2503	14	ISM	ENSG00000158545.16	ENST00000301011.10	3705	18	-57	4183	-57	1082	5prime_fragment	FALSE	canonical	3	156	junction_7	20.8616178804933	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACTCAGGAGCCCTGGTA	NA	False	NA	13	True	NA	NA	NA	88570345	88627781	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_88570567_88577109_88577727_88586599_88586685_88598177_88598327_88598619_88598713_88599790_88599949_88608933_88609052_88611267_88611537_88622196_88622389_88623218_88623345_88623957_88624063_88624601_88624746_88625201_88625268_88627621
transcript_79090.known	chr16	+	1060	3	FSM	ENSG00000124391.5	ENST00000244241.5	1060	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCAGAGGCCAACATTCA	88638507	True	NA	13	True	ATTAAA	-13	NA	88638571	88640468	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_88638648_88638980_88639310_88639813
transcript_79093.known	chr16	-	692	6	FSM	ENSG00000051523.11	ENST00000261623.8	692	6	0	0	0	0	multi-exon	FALSE	canonical	3	2428	junction_1	101.39625239623	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCGTGAGCCTCTGCCTGG	-88638469	True	NA	-7	True	AATAAA	-17	NA	88651053	88643288	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_88643572_88646115_88646198_88646754_88646839_88647100_88647176_88648044_88648115_88650955
transcript_79096.known	chr16	-	1006	5	FSM	ENSG00000051523.11	ENST00000566534.5	1006	5	0	0	0	0	multi-exon	FALSE	canonical	3	2428	junction_1	111.137302468613	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCGGAGGCACCATCAAG	-88638451	True	NA	NA	False	NA	NA	NA	88651035	88643513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_88643572_88646115_88646839_88647100_88647176_88648044_88648115_88650955
transcript_79105.nic	chr16	-	2097	12	NIC	ENSG00000167508.12	novel	1799	10	NA	NA	-16	0	combination_of_known_junctions	TRUE	canonical	2	6	junction_11	291.236037866309	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGCCTCCGCCGTTTTTC	NA	False	NA	-9	True	AATAAA	-15	NA	88663177	88651939	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_88652606_88653299_88653409_88654691_88654808_88655198_88655418_88655655_88655731_88656104_88656305_88657435_88657583_88657914_88658030_88658649_88658721_88660519_88660638_88660747_88660842_88663010
transcript_79110.nic	chr16	-	1961	11	NIC	ENSG00000167508.12	novel	1799	10	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_6	255.979764825269	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGCCTCCGCCGTTTTTC	-88655126	True	NA	-9	True	AATAAA	-15	NA	88663151	88651939	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_88652606_88653299_88653409_88654691_88654808_88655198_88655418_88655655_88655731_88656104_88656305_88657145_88657248_88657435_88657583_88657914_88658030_88658649_88658721_88663010
transcript_79122.known	chr16	-	1799	10	FSM	ENSG00000167508.12	ENST00000301012.8	1799	10	0	0	0	0	multi-exon	TRUE	canonical	3	565	junction_4	59.4090237149663	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGCCTCCGCCGTTTTTC	-88655066	True	NA	-9	True	AATAAA	-15	NA	88663091	88651939	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_88652606_88653299_88653409_88654691_88654808_88655198_88655418_88655655_88655731_88656104_88656305_88657435_88657583_88657914_88658030_88658649_88658721_88663010
transcript_79150.known	chr16	+	2446	4	FSM	ENSG00000260630.8	ENST00000669434.1	2446	4	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_2	0.816496580927726	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATCAGCTGTCCCCCAT	88662862	True	NA	6	True	AGTAAA	-11	NA	88663334	88675484	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_88663401_88671276_88671466_88671812_88672123_88673603
transcript_79153.known	chr16	+	2277	4	FSM	ENSG00000260630.8	ENST00000661622.1	2277	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.62466929133727	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTAGGGATCTGGATGC	88662889	True	NA	NA	False	AATATA	-4	NA	88663361	88675114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_88663401_88671276_88671694_88671812_88672123_88673603
transcript_79155.known	chr16	+	588	3	FSM	ENSG00000260630.8	ENST00000569786.6	1136	3	46	502	0	-502	multi-exon	FALSE	canonical	1	4	junction_2	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTGATTGTTTTCTGGT	88662896	True	NA	NA	False	NA	NA	NA	88663368	88672179	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_88663401_88671276_88671466_88671812
transcript_79158.known	chr16	-	1740	3	FSM	ENSG00000185669.6	ENST00000332281.6	1740	3	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_2	1.5	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCATGTTCCGTTCTTCG	-88685534	True	NA	-11	True	AATAAA	-14	NA	88686507	88677687	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_88678630_88681093_88681715_88686330
transcript_7916.known	chr1	+	4486	22	FSM	ENSG00000066135.13	ENST00000372396.4	4486	22	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	38.993283915005	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTGTCTGCCCCAAGGA	43645952	True	NA	11	True	AATAAA	-18	NA	43650148	43705518	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43650253_43653136_43653314_43655590_43655767_43660297_43660413_43662893_43663088_43665695_43665746_43666451_43666556_43666953_43667092_43667771_43668020_43669099_43669300_43671504_43671876_43683683_43683805_43688913_43689096_43690844_43691050_43691495_43691573_43692255_43692312_43693993_43694103_43694708_43694895_43697842_43698014_43703616_43703737_43704019_43704113_43704229
transcript_79164.known	chr16	-	1864	6	FSM	ENSG00000158717.11	ENST00000312838.9	1864	6	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_4	23.5847408296127	194	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTAGCAGCCTCGACTGG	-88704102	True	NA	-11	True	AATAAA	-14	NA	88706408	88696500	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_88697634_88698501_88698610_88698970_88699086_88699619_88699733_88701261_88701419_88706170
transcript_79174.known	chr16	+	1905	15	FSM	ENSG00000174177.13	ENST00000567949.5	1905	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	58.5902408813158	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTACAGTACACGTGGGGG	88703506	True	NA	6	True	AATAAA	-24	NA	88706521	88715386	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_88706599_88707135_88707211_88709937_88710017_88710222_88710283_88711634_88711696_88712060_88712384_88712621_88712906_88713311_88713448_88713646_88713779_88714135_88714228_88714382_88714487_88714586_88714738_88714859_88714927_88715047_88715107_88715181
transcript_79175.known	chr16	+	1721	15	FSM	ENSG00000174177.13	ENST00000453996.7	1721	15	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_7	24.2953762292838	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGGGGGACGGCAGCGC	88703487	True	NA	16	True	AATAAA	-34	NA	88706502	88715396	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_88706599_88707135_88707211_88709937_88710017_88710222_88710283_88711634_88711696_88712273_88712384_88712621_88712906_88713311_88713448_88713646_88713779_88714135_88714228_88714382_88714487_88714586_88714738_88714859_88714927_88715047_88715107_88715181
transcript_79176.known	chr16	+	1672	14	FSM	ENSG00000174177.13	ENST00000312060.9	1672	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_13	60.5553197131526	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTACAGTACACGTGGGGG	88703467	True	NA	6	True	AATAAA	-24	NA	88706482	88715386	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_88706599_88707135_88707211_88709937_88710017_88710222_88710283_88711634_88711696_88712273_88712384_88712621_88712906_88713311_88713448_88713646_88713779_88714135_88714228_88714382_88714487_88714586_88714738_88714859_88714927_88715181
transcript_79182.known	chr16	+	1586	14	FSM	ENSG00000174177.13	ENST00000564105.5	1586	14	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_2	59.3995596979278	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACGGGGGACTGGCCTCT	88703467	True	NA	-60	True	NA	NA	NA	88706482	88715320	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_88706599_88707135_88707211_88710222_88710283_88711634_88711696_88712273_88712384_88712621_88712906_88713311_88713448_88713646_88713779_88714135_88714228_88714382_88714487_88714586_88714738_88714859_88714927_88715047_88715107_88715181
transcript_79202.known	chr16	+	2664	10	FSM	ENSG00000167513.9	ENST00000301019.9	2664	10	0	0	0	0	multi-exon	TRUE	canonical	3	464	junction_1	60.0045265782219	616	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGCAGAAGAGCCCTCG	88789559	True	NA	15	True	AATAAA	-20	NA	88803788	88809258	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_88804060_88804544_88804668_88804761_88804899_88805439_88805638_88805723_88805870_88806020_88806122_88806485_88806675_88807050_88807204_88807280_88807483_88808114
transcript_79208.known	chr16	-	664	5	FSM	ENSG00000198931.11	ENST00000426324.6	664	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2364.25611979751	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCGTCTCCTGTCCTCCT	-88783152	True	NA	-4	True	AGTAAA	-15	NA	88811925	88809468	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_88809707_88810069_88810149_88810422_88810557_88811549_88811657_88811819
transcript_79211.known	chr16	-	931	5	FSM	ENSG00000198931.11	ENST00000378364.8	931	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2247.58886086846	1653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAACCCTCCAGGCACTG	-88783155	True	NA	NA	False	NA	NA	NA	88811928	88809338	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_88809841_88810069_88810149_88810422_88810557_88811549_88811657_88811819
transcript_79216.known	chr16	-	788	5	FSM	ENSG00000198931.11	ENST00000569616.1	788	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2711.32655493579	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCCAATTACACACAGCG	-88783124	True	NA	-53	True	GGGGCT	-44	NA	88811897	88809517	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_88809908_88810069_88810149_88810422_88810557_88811549_88811657_88811819
transcript_79220.known	chr16	-	542	4	FSM	ENSG00000198931.11	ENST00000568319.5	542	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2195.91863844421	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCGTCTCCTGTCCTCCT	-88783164	True	NA	-4	True	AGTAAA	-15	NA	88811937	88809468	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_88809707_88810069_88810149_88811549_88811657_88811819
transcript_79224.known	chr16	-	667	4	FSM	ENSG00000198931.11	ENST00000567391.5	667	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2321.37473637211	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCGTCTCCTGTCCTCCT	-88783155	True	NA	-4	True	AGTAAA	-15	NA	88811928	88809468	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_88809841_88810069_88810149_88811549_88811657_88811819
transcript_79227.known	chr16	-	515	3	FSM	ENSG00000198931.11	ENST00000562464.1	515	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2240.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTACCCTTCTTCTCT	-88811869	False	NA	NA	False	NA	NA	NA	88811880	88809735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_88809841_88810069_88810149_88811549
transcript_79233.known	chr16	-	584	2	FSM	ENSG00000198931.11	ENST00000564858.1	584	2	0	0	0	0	multi-exon	FALSE	canonical	3	5272	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACCCAGGGAAGGGAGGC	-88783147	True	NA	NA	False	NA	NA	NA	88811920	88811173	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_88811657_88811819
transcript_7924.nnic	chr1	+	4416	22	NNC	ENSG00000066135.13	novel	1023	8	NA	NA	-79	-59	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	60.332675608096	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTTGAAAACTGGTGCA	43646260	False	NA	18	True	TATAAA	-6	NA	43650456	43705459	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_43650550_43653136_43653314_43655590_43655767_43660297_43660413_43662893_43663088_43665695_43665746_43666451_43666556_43666953_43667092_43667771_43668020_43669099_43669300_43671504_43671876_43683683_43683805_43688913_43689096_43690844_43691050_43691495_43691573_43692255_43692312_43693993_43694103_43694708_43694895_43697842_43698014_43703616_43703737_43704019_43704113_43704229
transcript_79240.known	chr16	-	2344	14	FSM	ENSG00000141012.13	ENST00000268695.10	2344	14	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_5	13.706561293235	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTTGGCTGAGTGA	-88854945	True	NA	-19	True	AATAAA	-34	NA	88856947	88813733	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_88814526_88818006_88818125_88822588_88822711_88824766_88824870_88826701_88826839_88831997_88832102_88835212_88835353_88835724_88835850_88836200_88836268_88837621_88837766_88840991_88841095_88841896_88841972_88842705_88842830_88856757
transcript_79243.nic	chr16	-	2238	13	NIC	ENSG00000141012.13	novel	2344	14	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_12	29.0988497290796	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTTCTCTTGGCTGAGT	-88854965	True	NA	-21	True	AATAAA	-32	NA	88856967	88813735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_88814526_88818006_88818125_88822588_88822711_88824766_88824870_88826701_88826839_88831997_88832102_88835212_88835353_88835724_88835850_88836200_88836268_88837621_88837766_88840991_88841095_88841896_88841972_88856757
transcript_79245.known	chr16	-	1953	12	FSM	ENSG00000141012.13	ENST00000567525.5	1953	12	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_9	42.8803833090059	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTTCTCTTGGCTGAGT	-88856793	False	NA	-21	True	AATAAA	-32	NA	88856826	88813735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_88814526_88818006_88818125_88822588_88822711_88824766_88824870_88826701_88826839_88831997_88832102_88835212_88835353_88835724_88835850_88836200_88836268_88840991_88841095_88841896_88841972_88856757
transcript_79253.known	chr16	+	915	5	FSM	ENSG00000167515.10	ENST00000564404.5	915	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	481.254805170816	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATTTGGCTTTTTCCTTC	88846152	True	NA	14	True	ACTAAA	-14	NA	88857143	88861110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_88857184_88858618_88858790_88859344_88859751_88859892_88859973_88860892
transcript_79254.known	chr16	+	1084	5	FSM	ENSG00000167515.10	ENST00000565205.5	1084	5	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_2	375.190951383426	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGTGACCATGTGGGTC	88846139	True	NA	NA	False	NA	NA	NA	88857130	88861287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_88857184_88858618_88858790_88859344_88859751_88859892_88859973_88860913
transcript_79257.known	chr16	+	801	5	FSM	ENSG00000167515.10	ENST00000568583.5	801	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	444.008445865616	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGGCTGAACAGGTGGG	88846149	True	NA	NA	False	NA	NA	NA	88857140	88861309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_88857184_88858618_88858792_88859662_88859751_88859892_88859973_88860892
transcript_79259.known	chr16	+	2215	5	FSM	ENSG00000167515.10	ENST00000301021.7	2215	5	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_4	305.427057576764	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGGTTTTCTGTTAGG	88846094	True	NA	28	True	AATAAA	-29	NA	88857085	88862686	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_88857184_88858618_88858792_88859662_88859751_88859892_88859973_88860910
transcript_79264.known	chr16	+	854	5	FSM	ENSG00000167515.10	ENST00000567895.5	854	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	429.079465250902	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCCCAGAACCAGCCTA	88846094	True	NA	NA	False	NA	NA	NA	88857085	88861351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_88857184_88858641_88858792_88859662_88859751_88859892_88859973_88860913
transcript_7927.nic	chr1	+	3565	22	NIC	ENSG00000066135.13	novel	1023	8	NA	NA	-79	-1035	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	53.0619370264386	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATGAAATAACCGACCCA	43646260	False	NA	NA	False	AAAAAG	-5	NA	43650456	43704483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_43650675_43653136_43653314_43655590_43655767_43660297_43660413_43662893_43663088_43665695_43665746_43666451_43666556_43666953_43667092_43667771_43668020_43669099_43669300_43671504_43671876_43683683_43683805_43688913_43689096_43690844_43691050_43691495_43691573_43692255_43692312_43693993_43694103_43694708_43694895_43697842_43698014_43703616_43703737_43704019_43704113_43704229
transcript_79271.known	chr16	+	499	4	FSM	ENSG00000167515.10	ENST00000567312.5	499	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	397.02141000203	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGGCTTTTTCCTTCCG	88846143	True	NA	16	True	ACTAAA	-16	NA	88857134	88861112	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_88857184_88858618_88858790_88859892_88859973_88860913
transcript_79274.nic	chr16	+	3126	4	NIC	ENSG00000167515.10	novel	1084	5	NA	NA	-51	2	intron_retention	FALSE	canonical	3	812	junction_3	117.481913501611	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGATTTTTGGGTTTT	88856958	False	NA	20	True	AATAAA	-21	NA	88857034	88862678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_88857184_88858618_88859751_88859892_88859973_88860913
transcript_7928.nic	chr1	+	4541	22	NIC	ENSG00000066135.13	novel	1023	8	NA	NA	-79	-59	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	53.0619370264386	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTTGAAAACTGGTGCA	43646260	False	NA	18	True	TATAAA	-6	NA	43650456	43705459	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_43650675_43653136_43653314_43655590_43655767_43660297_43660413_43662893_43663088_43665695_43665746_43666451_43666556_43666953_43667092_43667771_43668020_43669099_43669300_43671504_43671876_43683683_43683805_43688913_43689096_43690844_43691050_43691495_43691573_43692255_43692312_43693993_43694103_43694708_43694895_43697842_43698014_43703616_43703737_43704019_43704113_43704229
transcript_79280.known	chr16	-	4033	11	FSM	ENSG00000129993.15	ENST00000327483.9	4033	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	3.9446165846632	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTTTGCGAAGTGTAGGA	-88941172	False	NA	1	True	AATAAA	-35	NA	88941198	88874857	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_88877276_88879269_88879461_88880719_88880789_88881290_88881490_88882675_88882762_88885045_88885270_88885960_88886143_88891881_88891972_88892243_88892486_88901503_88901657_88941019
transcript_79284.known	chr16	+	4095	11	FSM	ENSG00000176715.17	ENST00000614302.5	4095	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	38.2575482748176	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCCTCTGGTGCTGAC	89092427	True	NA	NA	False	ATTAAA	-18	NA	89093851	89156233	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89093997_89098590_89098764_89100661_89101348_89102603_89102760_89112091_89112247_89114338_89114488_89120800_89120914_89133135_89133263_89145266_89145402_89145937_89146050_89154089
transcript_79289.nic	chr16	+	2297	10	NIC	ENSG00000176715.17	novel	4095	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	46.6439097952525	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGCCCCTGTCCCACGCC	89092427	True	NA	4	True	AAAACA	-19	NA	89093851	89154584	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_89093997_89098590_89098764_89100661_89101348_89102603_89102760_89112091_89112247_89120800_89120914_89133135_89133263_89145266_89145402_89145937_89146050_89154089
transcript_7929.nic	chr1	+	4600	22	NIC	ENSG00000066135.13	novel	1023	8	NA	NA	-79	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	53.0619370264386	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTGTCTGCCCCAAGGA	43646260	False	NA	11	True	AATAAA	-18	NA	43650456	43705518	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_43650675_43653136_43653314_43655590_43655767_43660297_43660413_43662893_43663088_43665695_43665746_43666451_43666556_43666953_43667092_43667771_43668020_43669099_43669300_43671504_43671876_43683683_43683805_43688913_43689096_43690844_43691050_43691495_43691573_43692255_43692312_43693993_43694103_43694708_43694895_43697842_43698014_43703616_43703737_43704019_43704113_43704229
transcript_79290.known	chr16	+	2247	10	FSM	ENSG00000176715.17	ENST00000406948.7	2247	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	38.5816434315147	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGTCCCACGCCGTCTG	89092458	True	NA	9	True	AAAACA	-24	NA	89093882	89154589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89093997_89100661_89101348_89102603_89102760_89112091_89112247_89114338_89114488_89120800_89120914_89133135_89133263_89145266_89145402_89145937_89146050_89154089
transcript_79295.nic	chr16	+	2103	9	NIC	ENSG00000176715.17	novel	2247	10	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	48.4348789613435	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGCCCCTGTCCCACGCC	89092448	True	NA	4	True	AAAACA	-19	NA	89093872	89154584	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_89093997_89100661_89101348_89102603_89102760_89112091_89112247_89120800_89120914_89133135_89133263_89145266_89145402_89145937_89146050_89154089
transcript_79296.known	chr16	+	1541	9	FSM	ENSG00000176715.17	ENST00000378345.8	1541	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	40.6199996922698	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTGTCCCACGCCGTCT	89092473	True	NA	8	True	AAAACA	-23	NA	89093897	89154588	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89093993_89102603_89102760_89112091_89112247_89114338_89114488_89120800_89120914_89133135_89133263_89145266_89145402_89145937_89146050_89154089
transcript_79307.known	chr16	-	1615	9	FSM	ENSG00000259803.8	ENST00000682282.1	1615	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	17.3956711569287	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCGTCCTCCCTGGTTC	-89199508	False	NA	-5	True	GATAAA	-14	NA	89200537	89195760	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_89196306_89197297_89197410_89198121_89198337_89198441_89198551_89198651_89198798_89199022_89199192_89199412_89199568_89199712_89199817_89200477
transcript_79308.known	chr16	-	1945	9	FSM	ENSG00000259803.8	ENST00000562855.7	1945	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	12.5043742346429	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCGTCCTCCCTGGTTC	-89200622	True	NA	-5	True	GATAAA	-14	NA	89201651	89195760	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_89196306_89197297_89197410_89198121_89198337_89198441_89198551_89198651_89198798_89199022_89199192_89199412_89199568_89199712_89199817_89201261
transcript_79312.known	chr16	-	2443	1	FSM	ENSG00000259877.2	ENST00000570267.2	2443	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGAGTTATAGGAGTTC	-89217456	True	NA	-6	True	ATTAAA	-16	NA	89217653	89215210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_89215200_89217700
transcript_79313.known	chr16	+	11192	7	FSM	ENSG00000170100.14	ENST00000433976.7	11192	7	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	9.65516557197349	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTTAAATAGCCTGAAAGA	89216251	True	NA	NA	False	ATTAAA	-18	NA	89217702	89237141	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89217911_89220996_89221153_89222091_89222184_89223156_89223284_89224718_89224803_89225554_89225632_89226693
transcript_79317.known	chr16	+	267	2	FSM	ENSG00000170100.14	ENST00000565877.5	267	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTAGCTTTGGGCCATG	89216258	True	NA	-54	True	NA	NA	NA	89217709	89218307	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89217911_89218241
transcript_79318.known	chr16	-	8724	13	FSM	ENSG00000167522.17	ENST00000642600.1	8724	13	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	44.9060748179526	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGGAGTACATTTTTAAAAT	-89490428	False	NA	NA	False	NA	NA	NA	89490479	89268121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_89268664_89270816_89270910_89274813_89274958_89275092_89275192_89279071_89285650_89286038_89286187_89288527_89288671_89290624_89290829_89291012_89291184_89305205_89305345_89316932_89317076_89418283_89418369_89490244
transcript_79327.known	chr16	-	2801	7	FSM	ENSG00000167522.17	ENST00000642695.1	2801	7	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_5	27.2483434766634	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTGCAGAAACTTGGTCT	-89490251	False	NA	-17	True	AATAAA	-10	NA	89490302	89286672	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_89288671_89290624_89290829_89291012_89291184_89305205_89305345_89316932_89317079_89418283_89418369_89490244
transcript_79339.known	chr16	+	3367	18	FSM	ENSG00000197912.16	ENST00000645042.1	3367	18	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_10	224.020760283645	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTAGTTGGAAAATCTAC	89498367	True	NA	10	True	AATAAA	-2	NA	89508402	89557747	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89508601_89510489_89510593_89512947_89513038_89524005_89524248_89526328_89526469_89529476_89529580_89530682_89530809_89531903_89532067_89532462_89532637_89544647_89544773_89545871_89546182_89546657_89546761_89548002_89548114_89550493_89550610_89552978_89553136_89553793_89553961_89554485_89554564_89556886
transcript_79341.known	chr16	+	3266	18	FSM	ENSG00000197912.16	ENST00000645063.1	3266	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	228.444325139806	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTAGTTGGAAAATCTACA	89498367	True	NA	11	True	AATAAA	-3	NA	89508402	89557748	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89508601_89510489_89510593_89512947_89513038_89524005_89524248_89526328_89526469_89529476_89529580_89530682_89530809_89531903_89532067_89532462_89532637_89544647_89544773_89546657_89546761_89548002_89548114_89550493_89550610_89552978_89553136_89553793_89553961_89554485_89554564_89555877_89556086_89556886
transcript_79345.known	chr16	+	3099	17	FSM	ENSG00000197912.16	ENST00000646303.1	3099	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	172.248548615075	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTAGTTGGAAAATCTACA	NA	False	NA	11	True	AATAAA	-3	NA	89507501	89557748	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89507741_89510489_89510593_89512947_89513038_89524005_89524248_89526328_89526469_89529476_89529580_89530682_89530809_89531903_89532067_89532462_89532637_89544647_89544773_89546657_89546761_89548002_89548114_89550493_89550610_89552978_89553136_89553793_89553961_89554485_89554564_89556886
transcript_79353.known	chr16	+	3748	17	FSM	ENSG00000197912.16	ENST00000643105.1	3748	17	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_10	173.705468663914	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTAGTTGGAAAATCTAC	89498462	True	NA	10	True	AATAAA	-2	NA	89508497	89557747	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89508601_89510489_89510593_89512947_89513038_89524005_89524248_89526328_89526469_89529476_89529580_89530682_89530809_89531903_89532067_89532462_89532637_89544647_89544773_89545871_89546761_89548002_89548114_89550493_89550610_89552978_89553136_89553793_89553961_89554485_89554564_89556886
transcript_79355.known	chr16	+	3076	17	FSM	ENSG00000197912.16	ENST00000645818.2	3076	17	0	0	0	0	multi-exon	FALSE	canonical	3	581	junction_9	60.7890499493947	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCATTGTCTGGCCAG	89498367	True	NA	29	True	AATAAA	-21	NA	89508402	89557766	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89508601_89510489_89510593_89512947_89513038_89524005_89524248_89526328_89526469_89529476_89529580_89530682_89530809_89531903_89532067_89532462_89532637_89544647_89544773_89546657_89546761_89548002_89548114_89550493_89550610_89552978_89553136_89553793_89553961_89554485_89554564_89556886
transcript_79356.known	chr16	+	4581	17	FSM	ENSG00000197912.16	ENST00000644225.1	4581	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	178.245255459297	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTAGTTGGAAAATCTAC	89498365	True	NA	10	True	AATAAA	-2	NA	89508400	89557747	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89508601_89510489_89510593_89512947_89513038_89524005_89524248_89526328_89526469_89529476_89529580_89530682_89530809_89531903_89532067_89532462_89532637_89544647_89544773_89546657_89546761_89548002_89548114_89550493_89550610_89552978_89553136_89553793_89553961_89554485_89556086_89556886
transcript_79357.known	chr16	+	3012	17	FSM	ENSG00000197912.16	ENST00000644781.1	3012	17	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_13	177.146831752645	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTAGTTGGAAAATCTAC	89498367	True	NA	10	True	AATAAA	-2	NA	89508402	89557747	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89508601_89510489_89510593_89512947_89513038_89524005_89524248_89526328_89526469_89529476_89529580_89530682_89530809_89531903_89532067_89532462_89532637_89544647_89544773_89546657_89546761_89548002_89548114_89550493_89550610_89553023_89553136_89553793_89553961_89554485_89554564_89556886
transcript_79358.known	chr16	+	3026	17	FSM	ENSG00000197912.16	ENST00000268704.7	3026	17	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_7	177.145729203388	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTGTAGTTGGAAAATC	89498374	True	NA	7	True	NA	NA	NA	89508409	89557744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89508601_89510489_89510593_89512947_89513038_89524005_89524248_89526328_89526469_89529476_89529580_89530682_89530809_89531924_89532067_89532462_89532637_89544647_89544773_89546657_89546761_89548002_89548114_89550493_89550610_89552978_89553136_89553793_89553961_89554485_89554564_89556886
transcript_79364.known	chr16	+	4168	16	FSM	ENSG00000197912.16	ENST00000645977.1	4168	16	0	0	0	0	multi-exon	FALSE	canonical	3	581	junction_8	59.5953018282482	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAATCTACATTTGCAT	89498367	True	NA	18	True	AATAAA	-10	NA	89508402	89557755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89508601_89510489_89510593_89512947_89513038_89524005_89524248_89526328_89526469_89529476_89530809_89531903_89532067_89532462_89532637_89544647_89544773_89546657_89546761_89548002_89548114_89550493_89550610_89552978_89553136_89553793_89553961_89554485_89554564_89556886
transcript_79369.known	chr16	+	2565	14	FSM	ENSG00000197912.16	ENST00000646589.1	2565	14	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	189.166374284024	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTAGTTGGAAAATCTAC	89498374	True	NA	10	True	AATAAA	-2	NA	89508409	89557747	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89508601_89510489_89510593_89512947_89513038_89530682_89530809_89531903_89532067_89532462_89532637_89544647_89544773_89546657_89546761_89548002_89548114_89550493_89550610_89552978_89553136_89553793_89553961_89554485_89554564_89556886
transcript_79387.known	chr16	+	2288	10	FSM	ENSG00000197912.16	ENST00000341316.6	2288	10	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_9	214.325297931283	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCAGTGCTTGCCGTG	89498375	True	NA	5	True	AATAAA	-16	NA	89508410	89537721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89508601_89510489_89510593_89512947_89513038_89524005_89524248_89526328_89526469_89529476_89529580_89530682_89530809_89531903_89532067_89532462_89532637_89536764
transcript_79394.known	chr16	+	1632	2	FSM	ENSG00000197912.16	ENST00000568509.3	1632	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAAATCCTTAACAGTACT	89490898	True	NA	14	True	AATAAA	-18	NA	89490954	89499285	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89491387_89498085
transcript_79395.known	chr16	+	4255	19	FSM	ENSG00000197912.16	ENST00000644498.1	4255	19	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_7	290.296442781096	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTAGTTGGAAAATCTAC	89498359	True	NA	10	True	AATAAA	-2	NA	89508394	89557747	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89508601_89510489_89510593_89512947_89513038_89524005_89524248_89526328_89526469_89529476_89529580_89530682_89530809_89531924_89532067_89532462_89532637_89540943_89541028_89541152_89542280_89544647_89544773_89546657_89546761_89548002_89548114_89550493_89550610_89552978_89553136_89553793_89553961_89554485_89554564_89556886
transcript_79400.known	chr16	+	2187	6	FSM	ENSG00000167526.14	ENST00000311528.10	2187	6	0	0	0	0	multi-exon	FALSE	canonical	3	9495	junction_1	3823.70488400975	7164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACGCCTGTAATCCCAGC	89328906	True	NA	30	True	AATACA	-20	NA	89560681	89564542	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89560713_89560939_89561064_89561226_89561369_89561577_89561752_89562334_89562392_89562883
transcript_79408.nic	chr16	+	596	5	ISM	ENSG00000167526.14	ENST00000311528.10	2187	6	-66	2149	-61	0	5prime_fragment	FALSE	canonical	3	9495	junction_1	4221.14498684895	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTGAACACTTACTCAAAT	89560566	True	NA	NA	False	NA	NA	NA	89560615	89562393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_89560713_89560939_89561064_89561226_89561369_89561577_89561752_89562334
transcript_79409.known	chr16	+	924	5	FSM	ENSG00000167526.14	ENST00000484610.5	924	5	0	0	0	0	multi-exon	FALSE	canonical	3	9495	junction_1	3985.08302924795	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCAGTCATGCTGGGTCT	89328903	True	NA	3	True	AATAAA	-25	NA	89560678	89563067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89560713_89560939_89561064_89561226_89561752_89562334_89562392_89562883
transcript_79416.known	chr16	+	554	5	FSM	ENSG00000167526.14	ENST00000563270.5	554	5	0	0	0	0	multi-exon	FALSE	canonical	1	262	junction_1	8220.8617971293	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAATAAAGCCCTCCTG	89328905	True	NA	-32	True	AAAAAG	-34	NA	89560680	89563032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89560713_89561226_89561369_89561577_89561752_89562334_89562392_89562883
transcript_79418.known	chr16	+	568	4	FSM	ENSG00000167526.14	ENST00000565571.5	568	4	0	0	0	0	multi-exon	FALSE	canonical	3	9495	junction_1	4471.73414037801	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCAAAACATTGTGGGTG	89328907	True	NA	NA	False	NA	NA	NA	89560682	89561849	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89560713_89560939_89561064_89561226_89561369_89561577
transcript_79420.known	chr16	+	698	4	FSM	ENSG00000167526.14	ENST00000491523.5	698	4	0	0	0	0	multi-exon	FALSE	canonical	3	9495	junction_1	4805.48140726354	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTGAACACTTACTCAAAT	89328901	True	NA	NA	False	NA	NA	NA	89560676	89562393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89560713_89560939_89561369_89561577_89561752_89562334
transcript_79424.known	chr16	+	2385	5	FSM	ENSG00000167526.14	ENST00000393099.3	2385	5	0	0	0	0	multi-exon	FALSE	canonical	3	17921	junction_1	819.459578014682	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACGCCTGTAATCCCAGC	89328935	True	NA	30	True	AATACA	-20	NA	89560710	89564542	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89561064_89561226_89561369_89561577_89561752_89562334_89562392_89562883
transcript_79441.nnic	chr16	+	3961	17	NNC	ENSG00000178773.15	novel	2657	17	NA	NA	-52	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	40.0078117372095	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTCTCTTGTGCCTTCAG	89573414	True	NA	12	True	AATAAA	-18	NA	89575705	89597244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_89576072_89577538_89577722_89583696_89583772_89584027_89584103_89584773_89584858_89585463_89585554_89585686_89585786_89586669_89586757_89587042_89587103_89587555_89587926_89588096_89588809_89589896_89589952_89591006_89591059_89591126_89591261_89595366_89595604_89595830_89596352_89596483
transcript_79455.nic	chr16	+	2521	16	NIC	ENSG00000178773.15	novel	2442	15	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_10	35.4672932275482	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTTGTGCCTTCAGTC	89573414	True	NA	14	True	AATAAA	-20	NA	89575705	89597246	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_89576072_89577538_89577722_89583696_89583772_89584027_89584103_89584773_89584858_89585463_89585554_89585686_89585786_89586669_89586757_89587042_89587103_89587555_89587583_89588674_89588809_89589896_89589952_89591006_89591059_89591126_89591261_89595366_89595604_89596483
transcript_79460.nnic	chr16	+	4136	16	NNC	ENSG00000178773.15	novel	2442	15	NA	NA	0	-2	intron_retention	FALSE	non_canonical	0	0	junction_10	34.4600251499231	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTCTCTTGTGCCTTCAG	89573466	True	NA	12	True	AATAAA	-18	NA	89575757	89597244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_89576072_89577538_89577722_89583696_89583772_89584027_89584103_89584773_89584858_89585463_89585554_89585686_89585786_89586669_89586757_89587042_89587103_89587555_89587926_89588096_89588809_89589896_89589952_89591006_89591059_89591126_89591261_89595366_89596352_89596483
transcript_79468.nic	chr16	+	2588	16	NIC	ENSG00000178773.15	novel	2442	15	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_14	38.4181669989024	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTTGTGCCTTCAGTC	89573414	True	NA	14	True	AATAAA	-20	NA	89575705	89597246	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_89576072_89577538_89577722_89583696_89583772_89584027_89584103_89584773_89584858_89585463_89585554_89585686_89585786_89586669_89586757_89587042_89587103_89588674_89588809_89589896_89589952_89591006_89591059_89591126_89591261_89595366_89595604_89595830_89595925_89596483
transcript_79483.known	chr16	+	2442	15	FSM	ENSG00000178773.15	ENST00000319518.13	2442	15	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_9	30.11339114963	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTTGTGCCTTCAGTC	89573466	True	NA	14	True	AATAAA	-20	NA	89575757	89597246	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89576072_89577538_89577722_89583696_89583772_89584027_89584103_89584773_89584858_89585463_89585554_89585686_89585786_89586669_89586757_89587042_89587103_89588674_89588809_89589896_89589952_89591006_89591059_89591126_89591261_89595366_89595604_89596483
transcript_79484.nnic	chr16	+	3240	15	NNC	ENSG00000178773.15	novel	2442	15	NA	NA	-52	-2	intron_retention	TRUE	canonical	3	34	junction_9	28.3962486743498	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTCTCTTGTGCCTTCAG	89573414	True	NA	12	True	AATAAA	-18	NA	89575705	89597244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_89576072_89577538_89577722_89583696_89583772_89584027_89584103_89584773_89584858_89585463_89585554_89585686_89585786_89586669_89586757_89587042_89587103_89588674_89588809_89589896_89589952_89591006_89591059_89591126_89591261_89595366_89596352_89596483
transcript_7951.known	chr1	-	3389	4	FSM	ENSG00000236200.7	ENST00000659644.2	3391	4	2	0	2	0	multi-exon	FALSE	canonical	2	10	junction_1	2.44948974278318	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAATGGCGTGAACCTGGG	-43707125	True	NA	NA	False	NA	NA	NA	43707369	43699839	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_43702729_43703563_43703648_43704352_43704458_43707058
transcript_79513.nic	chr16	+	1715	11	FSM	ENSG00000015413.10	ENST00000690203.1	1631	11	-88	4	5	0	multi-exon	FALSE	canonical	3	82	junction_6	13.9143810498347	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATCCTGGGGTACGTGTC	89611960	True	NA	11	True	AATAAA	-14	NA	89613553	89638429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89613720_89630304_89630515_89635907_89636041_89636263_89636397_89636532_89636684_89636865_89636936_89637203_89637381_89637467_89637553_89637631_89637708_89637835_89637972_89638051
transcript_79514.nnic	chr16	+	2209	11	NNC	ENSG00000015413.10	novel	1631	11	NA	NA	-17	3080	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_10	28.5602871134028	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGATGATTAGTAACATATA	89612031	True	NA	6	True	AATAAA	-16	NA	89613624	89641536	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_89613720_89630304_89630515_89635907_89636041_89636263_89636397_89636532_89636684_89636865_89636936_89637203_89637381_89637467_89637553_89637631_89637708_89637835_89637972_89640593
transcript_79519.nnic	chr16	+	1714	10	NIC	ENSG00000015413.10	novel	1631	11	NA	NA	-70	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_8	31.5841028929991	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATCCTGGGGTACGTGTC	NA	False	NA	11	True	AATAAA	-14	NA	89613478	89638429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_89613720_89630304_89630515_89635907_89636041_89636263_89636397_89636532_89636684_89636865_89636936_89637203_89637381_89637467_89637553_89637835_89637972_89638051
transcript_79522.nic	chr16	+	1435	10	NIC	ENSG00000015413.10	novel	1631	11	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	34.0014524018033	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATCCTGGGGTACGTGTC	89612030	True	NA	11	True	AATAAA	-14	NA	89613623	89638429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_89613720_89635907_89636041_89636263_89636397_89636532_89636684_89636865_89636936_89637203_89637381_89637467_89637553_89637631_89637708_89637835_89637972_89638051
transcript_79529.known	chr16	+	1772	9	FSM	ENSG00000015413.10	ENST00000564281.5	1772	9	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_6	14.6538177619349	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTAGGCCCGCAATAAAAG	89612079	True	NA	-20	True	NA	NA	NA	89613672	89638398	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89613720_89630304_89630515_89635907_89636041_89636263_89636397_89636532_89636684_89636865_89636936_89637203_89637381_89637467_89637972_89638051
transcript_79542.known	chr16	-	2330	7	FSM	ENSG00000131165.16	ENST00000535997.7	2330	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	163.509853593666	1277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGCTGTTGTAAATAAACA	-89650036	True	NA	-43	True	NA	NA	NA	89657713	89644470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_89646088_89646526_89646734_89647202_89647332_89649350_89649498_89651568_89651647_89653903_89653924_89657581
transcript_79543.known	chr16	-	2412	7	FSM	ENSG00000131165.16	ENST00000674799.1	2412	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	161.7615700825	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCTAGAATGCTGTTGTA	-89650048	True	NA	-51	True	NA	NA	NA	89657725	89644478	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_89646088_89646526_89646715_89647202_89647332_89649350_89649498_89651568_89651647_89653903_89654021_89657581
transcript_79545.known	chr16	-	2321	7	FSM	ENSG00000131165.16	ENST00000675309.1	2321	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	165.416393786509	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTCAAGCTTTGCTTTG	-89649987	True	NA	-7	True	AATAAA	-19	NA	89657664	89644434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_89646088_89646526_89646715_89647202_89647332_89649350_89649521_89651568_89651647_89653903_89653924_89657581
transcript_79546.known	chr16	-	2300	7	FSM	ENSG00000131165.16	ENST00000675536.1	2300	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	165.416393786509	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTCCTAGAATGCTGT	-89649982	True	NA	-55	True	NA	NA	NA	89657659	89644482	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_89646088_89646526_89646715_89647202_89647332_89649350_89649553_89651568_89651647_89653903_89653924_89657581
transcript_79547.known	chr16	-	803	7	FSM	ENSG00000131165.16	ENST00000550102.5	803	7	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_3	158.788818526019	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTGGGTCTGTGTCCTGG	-89649973	True	NA	NA	False	NA	NA	NA	89657650	89645888	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_89646088_89646526_89646715_89647202_89647332_89649377_89649498_89651568_89651647_89653903_89653924_89657581
transcript_79548.known	chr16	-	2550	6	FSM	ENSG00000131165.16	ENST00000675909.1	2550	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	156.236999459155	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCACAGTACATGGTCTC	NA	False	NA	NA	False	TTTAAA	-13	NA	89657738	89644236	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_89646088_89646526_89646715_89647202_89647332_89649350_89649498_89651568_89651647_89657581
transcript_79550.known	chr16	-	1845	6	FSM	ENSG00000131165.16	ENST00000675778.1	1845	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	177.182391901679	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTGTCGTGGGTGTTAC	-89650016	True	NA	NA	False	NA	NA	NA	89657693	89644769	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_89646088_89646526_89646715_89647202_89647332_89651568_89651647_89653903_89653924_89657581
transcript_79551.known	chr16	-	2797	6	FSM	ENSG00000131165.16	ENST00000551981.6	2797	6	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_3	22.068982758614	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTCAAGCTTTGCTTTG	-89649998	True	NA	-7	True	AATAAA	-19	NA	89657675	89644434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_89646088_89646526_89647332_89649350_89649498_89651568_89651647_89653903_89653924_89657581
transcript_79552.known	chr16	-	2444	8	FSM	ENSG00000131165.16	ENST00000676355.1	2444	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	196.411168060209	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTCAAGCTTTGCTTTG	-89650031	True	NA	-7	True	AATAAA	-19	NA	89657708	89644434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_89646088_89646526_89646715_89647202_89647332_89649350_89649498_89651568_89651647_89653903_89653924_89656632_89656735_89657581
transcript_79554.known	chr16	+	2190	3	FSM	ENSG00000167523.15	ENST00000301031.8	2190	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	24.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAAAAAAAAGC	89656682	True	NA	NA	False	NA	NA	NA	89657801	89671267	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89657836_89658247_89658422_89669285
transcript_79559.known	chr16	+	1297	3	FSM	ENSG00000167523.15	ENST00000457689.3	1297	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	17.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCGCCCCACCCTGTGAG	89656718	True	NA	NA	False	NA	NA	NA	89657837	89670297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89657949_89658247_89658422_89669285
transcript_7956.nnic	chr1	+	1068	3	NNC	ENSG00000117407.17	novel	1439	5	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	61	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGGCTTGTCAGATC	43932397	True	NA	30	True	NA	NA	NA	43933737	43937240	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_43933886_43934111_43934246_43936454
transcript_79563.known	chr16	+	2368	2	FSM	ENSG00000167523.15	ENST00000565890.1	2368	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGCTGAAA	89656709	True	NA	NA	False	NA	NA	NA	89657828	89671272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89658210_89669285
transcript_79580.nic	chr16	+	1749	13	NIC	ENSG00000185324.22	novel	1767	13	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	182	junction_1	85.3409420435988	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTTTCACCAGCGTTT	89681605	True	NA	34	True	GATAAA	-15	NA	89686667	89696353	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_89686760_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693327_89693397_89693468_89694172_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695594
transcript_79581.known	chr16	+	1424	13	FSM	ENSG00000185324.22	ENST00000505473.5	1424	13	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_12	127.143919983965	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGAGGACAAGAGGGACA	89681607	True	NA	NA	False	NA	NA	NA	89686669	89696164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89686760_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693327_89693397_89693468_89694172_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695728
transcript_79589.known	chr16	+	1767	13	FSM	ENSG00000185324.22	ENST00000353379.12	1767	13	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	83.2214248589602	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTCACCAGCGTTTA	89681626	True	NA	35	True	GATAAA	-16	NA	89686688	89696354	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89686798_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693327_89693397_89693468_89694172_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695594
transcript_7959.known	chr1	+	3883	20	FSM	ENSG00000117408.11	ENST00000372343.8	3883	20	0	0	0	0	multi-exon	TRUE	canonical	3	61	junction_14	17.6046141017953	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATGCATACATTTATTTA	43945290	True	NA	23	True	ATTAAA	-17	NA	43946949	43968022	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43947685_43949416_43950154_43956319_43956461_43956559_43956702_43956809_43956977_43957194_43957316_43957401_43957550_43957976_43958159_43958241_43958269_43958460_43958596_43958745_43958890_43960248_43960330_43960875_43961014_43961165_43961263_43964268_43964322_43966574_43966642_43966723_43966783_43966929_43967020_43967314_43967497_43967585
transcript_79612.nic	chr16	+	2179	12	NIC	ENSG00000185324.22	novel	1424	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	182	junction_1	85.3210756519937	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTTTCACCAGCGTTT	89681607	True	NA	34	True	GATAAA	-15	NA	89686669	89696353	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_89686760_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693327_89693397_89693468_89694172_89694789_89694930_89695071_89695292_89695346_89695594
transcript_79620.nic	chr16	+	1818	12	NIC	ENSG00000185324.22	novel	1424	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	182	junction_1	81.1758625525902	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTTTCACCAGCGTTT	89681607	True	NA	34	True	GATAAA	-15	NA	89686669	89696353	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_89686760_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693468_89694172_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695594
transcript_79627.nic	chr16	+	2229	12	NIC	ENSG00000185324.22	novel	1767	13	NA	NA	-12	0	intron_retention	FALSE	canonical	3	193	junction_1	82.9153705755812	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTTTCACCAGCGTTT	NA	False	NA	34	True	GATAAA	-15	NA	89686657	89696353	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_89686798_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693327_89693397_89693468_89694172_89694789_89694930_89695071_89695292_89695346_89695594
transcript_79635.nic	chr16	+	1868	12	NIC	ENSG00000185324.22	novel	1767	13	NA	NA	-12	0	intron_retention	FALSE	canonical	3	193	junction_1	78.6029881878934	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTTTCACCAGCGTTT	NA	False	NA	34	True	GATAAA	-15	NA	89686657	89696353	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_89686798_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693468_89694172_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695594
transcript_79639.known	chr16	+	1376	12	FSM	ENSG00000185324.22	ENST00000510811.6	1376	12	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	119.924287409781	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGTGGTGGACGCTGGC	89681628	True	NA	NA	False	NA	NA	NA	89686690	89696038	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89686798_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693327_89693397_89693468_89694172_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695594
transcript_79663.nic	chr16	+	2403	11	NIC	ENSG00000185324.22	novel	1767	13	NA	NA	-153	0	intron_retention	FALSE	canonical	3	182	junction_1	79.4125934597278	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTTTCACCAGCGTTT	NA	False	NA	34	True	GATAAA	-15	NA	89686516	89696353	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_89686760_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693468_89694172_89694789_89694930_89695071_89695292_89695346_89695594
transcript_79668.nic	chr16	+	2535	11	NIC	ENSG00000185324.22	novel	2532	11	NA	NA	-12	0	intron_retention	FALSE	canonical	3	182	junction_1	85.0917739855034	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTTTCACCAGCGTTT	NA	False	NA	34	True	GATAAA	-15	NA	89686657	89696353	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_89686760_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695594
transcript_79684.known	chr16	+	2532	11	FSM	ENSG00000185324.22	ENST00000472018.5	2532	11	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	82.4024271487194	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTCACCAGCGTTTA	89681637	True	NA	35	True	GATAAA	-16	NA	89686699	89696354	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89686798_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695594
transcript_79713.nic	chr16	+	2957	10	NIC	ENSG00000185324.22	novel	2532	11	NA	NA	-2	0	intron_retention	FALSE	canonical	3	182	junction_1	83.7077514589956	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTTTCACCAGCGTTT	89681605	True	NA	34	True	GATAAA	-15	NA	89686667	89696353	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_89686760_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89694789_89694930_89695071_89695292_89695346_89695594
transcript_79725.nic	chr16	+	3005	10	NIC	ENSG00000185324.22	novel	2532	11	NA	NA	-12	0	intron_retention	FALSE	canonical	3	193	junction_1	80.507341893553	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTTTCACCAGCGTTT	NA	False	NA	34	True	GATAAA	-15	NA	89686657	89696353	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_89686798_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89694789_89694930_89695071_89695292_89695346_89695594
transcript_7977.nnic	chr1	+	3615	14	NNC	ENSG00000117408.11	novel	3883	20	NA	NA	-574	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	29.9358288035231	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGTATGCATACATTTAT	NA	False	NA	20	True	ATTAAA	-14	NA	43946375	43968019	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_43947685_43949416_43950154_43956319_43956461_43956559_43956702_43956809_43956977_43957194_43957316_43957401_43957550_43957976_43958159_43958241_43958269_43958460_43958596_43958745_43958890_43960248_43960330_43960875_43960987_43967849
transcript_79774.known	chr16	-	692	3	FSM	ENSG00000158792.16	ENST00000569918.1	692	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	30	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTGCAGGCACGGCGT	-89700215	True	NA	NA	False	NA	NA	NA	89701640	89698067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_89698306_89700929_89701234_89701490
transcript_79775.known	chr16	-	2331	3	FSM	ENSG00000158792.16	ENST00000289805.10	2331	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	8	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTGTTAAAAAAGCTTTT	-89700280	True	NA	0	True	ATTAAA	-15	NA	89701705	89696356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_89698306_89700929_89701234_89701627
transcript_7979.nic	chr1	+	3454	11	ISM	ENSG00000117408.11	ENST00000372343.8	3883	20	-179	8537	-179	1936	5prime_fragment	FALSE	canonical	3	70	junction_1	16.8166584076623	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGGCTTACTCAATTCA	43946721	False	NA	24	True	ATTAAA	-18	NA	43946770	43959485	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_43947685_43949416_43950154_43956319_43956461_43956559_43956702_43956809_43956977_43957194_43957316_43957401_43957550_43957976_43958159_43958241_43958269_43958460_43958596_43958745
transcript_79792.known	chr16	-	4601	43	FSM	ENSG00000187741.15	ENST00000568369.5	4601	43	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	38.6969225398992	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGAAGGCTACTTGAGCC	-89811717	True	NA	0	True	AATAAA	-17	NA	89816646	89738402	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_89738709_89738881_89738975_89739128_89739290_89739477_89739554_89739993_89740100_89740803_89740867_89742799_89742939_89744958_89745072_89746583_89746689_89746830_89746891_89748658_89748768_89749729_89749903_89752137_89752223_89758576_89758706_89761948_89762023_89764889_89765067_89767140_89767238_89769836_89770025_89770165_89770260_89770563_89770635_89771677_89771815_89773270_89773385_89775741_89775816_89778800_89778851_89778942_89779004_89779868_89779958_89782858_89782919_89783006_89783103_89784853_89784965_89791402_89791537_89791926_89792069_89792470_89792548_89795905_89796019_89799165_89799233_89799604_89799639_89803258_89803342_89805279_89805393_89808293_89808368_89810706_89810803_89810928_89811072_89814519_89814614_89815876_89815987_89816536
transcript_79812.known	chr16	-	2660	15	FSM	ENSG00000075399.14	ENST00000389386.8	2660	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_12	7.6960763923401	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGCCGTGTGGCTCCCTC	-89720772	True	NA	-1	True	AATAAA	-16	NA	89720898	89707133	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_89707955_89708426_89708532_89708856_89708957_89709226_89709436_89709776_89709907_89710585_89711011_89711326_89711413_89711881_89711970_89712046_89712100_89712459_89712523_89712604_89712717_89716461_89716625_89716729_89716823_89719026_89719103_89720762
transcript_7982.nic	chr1	+	1670	2	ISM	ENSG00000117408.11	ENST00000372343.8	3883	20	15	17656	15	821	5prime_fragment	FALSE	canonical	3	70	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGACTCTCTTTTCCTT	43945305	True	NA	NA	False	ATTAAA	-29	NA	43946964	43950366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_43947685_43949416
transcript_79824.nic	chr16	-	2187	13	NIC	ENSG00000187741.15	novel	5452	43	NA	NA	-17	20	intron_retention	FALSE	canonical	3	66	junction_3	41.1976098281873	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACACACACACACACACAAA	-89811745	True	NA	NA	False	NA	NA	NA	89816674	89791023	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_-_89792069_89792470_89792548_89795905_89796019_89799165_89799233_89799604_89799639_89803258_89803342_89805279_89805393_89808293_89808368_89810706_89810803_89810928_89811072_89814519_89814614_89815876_89815987_89816536
transcript_79827.known	chr16	+	2206	11	FSM	ENSG00000158805.12	ENST00000568295.5	2206	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	12.9769025580067	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCTGGTGTGCAGTGG	89721468	True	NA	5	True	AATAAA	-15	NA	89721572	89738571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89721846_89722530_89722835_89723136_89723184_89723259_89723710_89727278_89727326_89729234_89729319_89733301_89733413_89733481_89733558_89733920_89734039_89737805_89737906_89737975
transcript_79830.known	chr16	+	4628	11	FSM	ENSG00000158805.12	ENST00000443381.7	4628	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	12.9769025580067	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCTGACACATTCCTCT	89721432	True	NA	NA	False	ATTAAA	-24	NA	89721536	89740925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89721846_89722530_89722835_89723136_89723184_89723259_89723710_89727278_89727358_89729234_89729319_89733301_89733413_89733481_89733558_89733920_89734039_89737805_89737906_89737975
transcript_79835.known	chr16	+	4589	11	FSM	ENSG00000158805.12	ENST00000289816.9	4589	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	12.9769025580067	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTGTGCTGTCATTCTA	89720695	True	NA	NA	False	AATAAA	-27	NA	89720984	89740903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89721277_89722530_89722835_89723136_89723184_89723259_89723710_89727278_89727358_89729234_89729319_89733301_89733413_89733481_89733558_89733920_89734039_89737805_89737906_89737975
transcript_79840.known	chr16	-	1088	11	FSM	ENSG00000187741.15	ENST00000534992.5	1088	11	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	52.8359725944361	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTCCTGCACCAATGTT	-89811726	True	NA	NA	False	NA	NA	NA	89816655	89798918	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_89799080_89799171_89799233_89799604_89799639_89803258_89803342_89805279_89805393_89808293_89808368_89810706_89810803_89810928_89811072_89814519_89814614_89815876_89815987_89816536
transcript_79847.known	chr16	-	1694	10	FSM	ENSG00000187741.15	ENST00000563673.5	1694	10	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	23.5801758127039	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGAATAAAGCACTGTGT	-89811706	True	NA	-29	True	ATTAAA	-32	NA	89816635	89798384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_89799233_89799604_89799639_89803258_89803342_89805279_89805393_89808293_89808368_89810706_89810803_89810928_89811072_89814519_89814614_89815876_89815987_89816536
transcript_79858.nic	chr16	-	2120	7	ISM	ENSG00000075399.14	ENST00000561976.5	2791	14	7713	0	-12	0	3prime_fragment	FALSE	canonical	3	11	junction_2	6.02771377334171	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGCCGTGTGGCTCCCTC	-89711453	True	NA	-1	True	AATAAA	-16	NA	89711656	89707133	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_-_89707955_89708426_89708532_89708856_89708957_89709226_89709436_89709776_89709907_89710585_89711011_89711326
transcript_7986.known	chr1	+	987	8	FSM	ENSG00000117410.14	ENST00000472174.7	987	8	0	0	0	0	multi-exon	FALSE	canonical	3	1545	junction_7	70.2444710584806	1187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCAGCTTCTGTTGCCCTC	43966143	True	NA	8	True	AATAAA	-21	NA	43974959	43978295	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43975108_43975799_43975849_43976089_43976174_43976301_43976380_43976589_43976660_43976772_43976825_43977025_43977217_43977980
transcript_79865.nnic	chr16	+	1446	4	NNC	ENSG00000261373.1	novel	1753	4	NA	NA	-8	-7	intron_retention	TRUE	canonical	0	0	junction_3	33.2966464777861	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTGCTATTCCTCTCCT	89709515	True	NA	NA	False	NA	NA	NA	89711847	89718157	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_89712223_89712688_89712819_89716470_89716598_89717343
transcript_79867.known	chr16	+	1753	4	FSM	ENSG00000261373.1	ENST00000562866.1	1753	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	33.2966464777861	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCCTCTCCTTGCCAGTT	89709523	True	NA	NA	False	NA	NA	NA	89711855	89718165	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89712223_89712688_89712819_89716470_89716905_89717343
transcript_79872.known	chr16	-	578	2	FSM	ENSG00000187741.15	ENST00000563767.1	578	2	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-89791997	True	NA	NA	False	NA	NA	NA	89792011	89791043	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_89791537_89791926
transcript_79873.known	chr16	+	931	2	FSM	ENSG00000261373.1	ENST00000562298.1	931	2	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTCCTCTCCTTGCCAGT	89716517	False	NA	NA	False	NA	NA	NA	89716527	89718164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89716638_89717343
transcript_79874.known	chr16	-	5452	43	FSM	ENSG00000187741.15	ENST00000389301.8	5452	43	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	41.8528899730111	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGATTCTTGTCTTTTT	-89811718	True	NA	-15	True	AAGAAA	-23	NA	89816647	89737548	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_89738709_89738881_89738975_89739132_89739290_89739477_89739554_89739993_89740100_89740803_89740867_89742799_89742939_89744958_89745072_89746583_89746689_89746830_89746891_89748658_89748768_89749729_89749903_89752137_89752223_89758576_89758706_89761948_89762023_89764889_89765067_89767140_89767238_89769836_89770025_89770165_89770260_89770563_89770635_89771677_89771815_89773270_89773385_89775741_89775816_89778800_89778851_89778942_89779004_89779868_89779958_89782858_89782919_89783006_89783103_89784853_89784965_89791402_89791537_89791926_89792069_89792470_89792548_89795905_89796019_89799165_89799233_89799604_89799639_89803258_89803342_89805279_89805393_89808293_89808368_89810706_89810803_89810928_89811072_89814519_89814614_89815876_89815987_89816536
transcript_79878.nnic	chr16	+	3378	16	NNC	ENSG00000204991.11	novel	3268	15	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_10	11.1884861452398	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTCTGGGATGTGCGCT	NA	False	NA	5	True	AATAAA	-16	NA	89828433	89871319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr16_+_89828795_89845321_89845366_89850303_89850661_89854285_89854367_89854486_89854652_89855599_89855687_89856112_89856237_89858337_89858508_89859164_89859355_89860682_89860796_89861217_89861287_89863475_89863611_89863793_89863862_89868188_89868217_89869566_89869683_89870049
transcript_79881.known	chr16	+	3268	15	FSM	ENSG00000204991.11	ENST00000378247.8	3268	15	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_10	6.54029893843406	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTCTGGGATGTGCGCT	89827758	True	NA	5	True	AATAAA	-16	NA	89828474	89871319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89828795_89845321_89845366_89850303_89850661_89854285_89854367_89854486_89854652_89855599_89855687_89856112_89856237_89858337_89858508_89859164_89859355_89860682_89860796_89863475_89863611_89863793_89863862_89868188_89868217_89869566_89869683_89870049
transcript_79891.known	chr16	+	2172	13	FSM	ENSG00000204991.11	ENST00000393062.6	2172	13	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_12	9.81884525910365	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTATATATTTATATACAC	89827782	True	NA	11	True	AATATA	-9	NA	89828498	89870391	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89828795_89845321_89845366_89850303_89850661_89854285_89854367_89854486_89854652_89855599_89855687_89856112_89856237_89858337_89858508_89859164_89859355_89860682_89860796_89863475_89863611_89863793_89863862_89870049
transcript_79903.known	chr16	+	2377	19	FSM	ENSG00000141002.20	ENST00000263347.11	2377	19	0	0	0	0	multi-exon	FALSE	canonical	2	27	junction_17	93.9633498291281	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTCCGCACCTTCTCCT	89863936	True	NA	35	True	TATAAA	-19	NA	89873585	89911384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89873860_89883350_89883513_89884581_89884657_89885847_89885967_89887651_89887718_89892192_89892276_89893727_89893859_89895037_89895138_89895989_89896084_89898556_89898650_89898766_89898873_89900634_89900795_89904117_89904206_89904937_89905097_89906193_89906285_89907242_89907323_89908965_89909084_89910590_89910664_89911079
transcript_79904.nic	chr16	+	2414	19	NIC	ENSG00000141002.20	novel	2377	19	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_16	88.7080104111862	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCTCTGCCGTCCGCACCT	89863917	True	NA	29	True	TATAAA	-13	NA	89873566	89911378	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_89873860_89883350_89883513_89884581_89884657_89885847_89885967_89887651_89887718_89892192_89892276_89893727_89893859_89895037_89895138_89895989_89896084_89898556_89898650_89898766_89898873_89900634_89900795_89904117_89904206_89904937_89905097_89906193_89906285_89907242_89907323_89908965_89909108_89910590_89910664_89911079
transcript_79924.known	chr16	+	2248	18	FSM	ENSG00000141002.20	ENST00000263346.13	2248	18	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_7	36.6927766950349	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTCTGCCGTCCGCACCTT	89863942	True	NA	30	True	TATAAA	-14	NA	89873591	89911379	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89873860_89883350_89883513_89884581_89884657_89885847_89885967_89887651_89887718_89892192_89892276_89893727_89893859_89895037_89895138_89895989_89896084_89898556_89898650_89898766_89898873_89900634_89900795_89904117_89904206_89904937_89905097_89906193_89906285_89907242_89907323_89910590_89910664_89911079
transcript_79931.nic	chr16	+	2229	18	NIC	ENSG00000141002.20	novel	2248	18	NA	NA	-5	0	combination_of_known_junctions	TRUE	canonical	3	37	junction_7	72.0804049314826	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCTCTGCCGTCCGCACCT	89863915	True	NA	29	True	TATAAA	-13	NA	89873564	89911378	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_89873860_89883350_89883513_89884581_89884657_89885847_89885967_89887651_89887718_89892192_89892276_89893727_89893859_89895082_89895138_89895989_89896084_89898556_89898650_89898766_89898873_89900634_89900795_89904117_89904206_89904937_89905097_89906193_89906285_89907242_89907323_89910590_89910664_89911079
transcript_7996.known	chr1	+	1685	7	FSM	ENSG00000117410.14	ENST00000532642.5	1685	7	0	0	0	0	multi-exon	FALSE	canonical	3	1579	junction_2	58.7066625028388	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGCACCTGTGTCCCCC	43966127	True	NA	-74	True	NA	NA	NA	43974943	43978213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43975108_43975799_43975849_43976089_43976174_43976301_43976380_43976589_43976660_43976772_43976825_43977025
transcript_79993.known	chr16	+	767	4	FSM	ENSG00000258947.8	ENST00000555810.5	767	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	229.342538574945	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCACTTCTTCATGCCC	89921375	False	NA	NA	False	NA	NA	NA	89921391	89935235	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89921432_89932570_89932680_89933467_89933579_89934728
transcript_79994.known	chr16	+	1706	4	FSM	ENSG00000258947.8	ENST00000315491.12	1706	4	0	0	0	0	multi-exon	FALSE	canonical	3	454	junction_1	25.3026129524645	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGTGCCAGAGATGTCC	89911148	True	NA	34	True	AATAAA	-23	NA	89923341	89936097	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89923459_89932570_89932680_89933467_89933579_89934728
transcript_79995.nic	chr16	+	487	3	ISM	ENSG00000141002.20	ENST00000614813.4	2047	6	-74	6020	-3	0	5prime_fragment	FALSE	canonical	3	341	junction_1	16.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAGAAAAACAAGA	89863917	True	NA	28	True	NA	NA	NA	89873566	89884613	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_89873860_89883350_89883513_89884581
transcript_79998.known	chr16	+	981	2	FSM	ENSG00000141002.20	ENST00000561585.1	981	2	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAACGTGCCTTTGCCCCC	89863942	True	NA	NA	False	NA	NA	NA	89873591	89884063	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89873860_89883350
transcript_8.known	ERCC-00024	+	519	1	FSM	ERCC-00024A	DQ854993	519	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00024_+_0_500
transcript_80.known	SIRV10001	+	9941	1	FSM	SIRV10001A	SIRV10001	9941	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	9941	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV10001_+_0_9900
transcript_80000.known	chr16	+	2111	1	FSM	ENSG00000258839.4	ENST00000555147.2	2111	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTAGCCCCTTCCAGAAAG	89918845	True	NA	6	True	AATAAA	-20	NA	89918861	89920972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89918900_89921000
transcript_80004.known	chr16	+	3620	13	FSM	ENSG00000140995.17	ENST00000563594.6	3620	13	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	164.586350183321	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTGTGTGTGTGGTGA	89942024	True	NA	5	True	ATTAAA	-14	NA	89948754	89968060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89948815_89949416_89949514_89954242_89954377_89955168_89955267_89957510_89957661_89959013_89959156_89960930_89961096_89961736_89961865_89962011_89962126_89963362_89963444_89964169_89964311_89964465_89964576_89965860
transcript_80005.known	chr16	+	1767	13	FSM	ENSG00000140995.17	ENST00000563795.1	1767	13	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_10	168.203910642873	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTAGAAATTCCACAGCTC	89942072	True	NA	NA	False	NA	NA	NA	89948802	89966306	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89948815_89949416_89949514_89954242_89954377_89955168_89955267_89957510_89957661_89959013_89959156_89960930_89961096_89961736_89961865_89962011_89962126_89963362_89963444_89964220_89964311_89964465_89964576_89965860
transcript_80007.nic	chr16	+	3544	12	NIC	ENSG00000140995.17	novel	3620	13	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	93	junction_9	163.706146736581	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTGTGTGTGTGGTGA	89942003	True	NA	5	True	ATTAAA	-14	NA	89948733	89968060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_89948815_89954242_89954377_89955168_89955267_89957510_89957661_89959013_89959156_89960930_89961096_89961736_89961865_89962011_89962126_89963362_89963444_89964169_89964311_89964465_89964576_89965860
transcript_80008.nic	chr16	+	3493	12	NIC	ENSG00000140995.17	novel	3620	13	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_9	168.083509350865	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTGTGTGTGTGGTGA	89942003	True	NA	5	True	ATTAAA	-14	NA	89948733	89968060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_89948815_89954242_89954377_89955168_89955267_89957510_89957661_89959013_89959156_89960930_89961096_89961736_89961865_89962011_89962126_89963362_89963444_89964220_89964311_89964465_89964576_89965860
transcript_8001.known	chr1	+	944	7	FSM	ENSG00000117410.14	ENST00000236067.8	944	7	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	592.221078276986	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCAGTGCAGCTTCTGTT	43966131	True	NA	2	True	AATAAA	-15	NA	43974947	43978289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43975108_43976089_43976174_43976301_43976380_43976589_43976660_43976772_43976825_43977025_43977217_43977980
transcript_80012.nic	chr16	+	898	6	NIC	ENSG00000140995.17	novel	852	6	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_1	195.206557266911	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTGTCTAGTTTGTACA	89942015	True	NA	NA	False	ATTAAA	-14	NA	89948745	89959366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr16_+_89948815_89949419_89949514_89954242_89954377_89955168_89955267_89957510_89957661_89959013
transcript_80013.known	chr16	+	516	6	FSM	ENSG00000140995.17	ENST00000566079.5	516	6	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	236.187552593273	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAGTGCTCCTTGAGCACC	89942024	True	NA	NA	False	NA	NA	NA	89948754	89959039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89948815_89949419_89949514_89954288_89954377_89955168_89955267_89957510_89957661_89959013
transcript_80014.known	chr16	+	612	6	FSM	ENSG00000140995.17	ENST00000561784.5	612	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	208.373318829451	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGAGCACCGCTTTTACA	89942024	True	NA	NA	False	NA	NA	NA	89948754	89959048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89948815_89949416_89949514_89954242_89954377_89955168_89955267_89957472_89957661_89959013
transcript_80015.known	chr16	+	852	6	FSM	ENSG00000140995.17	ENST00000418391.6	852	6	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	189.022749953544	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTGTCTAGTTTGTACA	89942064	True	NA	NA	False	ATTAAA	-14	NA	89948794	89959366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89948815_89949416_89949514_89954242_89954377_89955168_89955267_89957510_89957661_89959013
transcript_80018.known	chr16	+	816	5	FSM	ENSG00000140995.17	ENST00000610455.4	816	5	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	122.693469671372	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTGTGTCTAGTTTGT	89942000	True	NA	NA	False	ATTAAA	-11	NA	89948730	89959363	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89948815_89954242_89954377_89955168_89955267_89957510_89957661_89959013
transcript_80021.nic	chr16	+	685	4	ISM	ENSG00000140995.17	ENST00000562986.5	468	5	-48	1606	0	0	5prime_fragment	FALSE	canonical	2	13	junction_1	235.006855691961	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTGTCTAGTTTGTACA	89942000	True	NA	NA	False	ATTAAA	-14	NA	89948730	89959366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_89948815_89955168_89955267_89957510_89957661_89959013
transcript_80022.known	chr16	+	535	2	FSM	ENSG00000140995.17	ENST00000562044.1	535	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGTGTCTAGTTTGTAC	89958208	True	NA	NA	False	ATTAAA	-13	NA	89958350	89959365	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_89958534_89959013
transcript_80023.known	chr16	-	2744	1	FSM	ENSG00000177946.7	ENST00000646748.1	2744	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTTTAAAAGCTCATATA	-89972166	True	NA	-17	True	ATTAAA	-17	NA	89972534	89969790	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_89969800_89972500
transcript_80035.nic	chr16	+	1333	6	ISM	ENSG00000223959.9	ENST00000557444.5	2447	17	-53	15472	-3	495	5prime_fragment	FALSE	canonical	3	27	junction_1	12.3223374405995	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACAAAGGCACACCCCAG	89970664	True	NA	NA	False	AAAAAG	-11	NA	89972577	89985196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_89972766_89977638_89977803_89978809_89978879_89980241_89980337_89981772_89981924_89984530
transcript_80036.nic	chr16	+	796	6	ISM	ENSG00000223959.9	ENST00000436447.5	3003	10	-12	11922	0	0	5prime_fragment	FALSE	canonical	1	4	junction_1	19.7281524730523	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACTCGTTAATGTGTTT	89970667	True	NA	13	True	AGTAAA	-21	NA	89972580	89984701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_89972766_89977677_89977803_89978809_89978879_89980241_89980337_89981772_89981924_89984530
transcript_80037.nic	chr16	+	1291	6	ISM	ENSG00000223959.9	ENST00000436447.5	3003	10	-12	11427	0	495	5prime_fragment	FALSE	canonical	1	4	junction_1	19.7281524730523	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACAAAGGCACACCCCAG	89970667	True	NA	NA	False	AAAAAG	-11	NA	89972580	89985196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr16_+_89972766_89977677_89977803_89978809_89978879_89980241_89980337_89981772_89981924_89984530
transcript_8005.known	chr1	+	2466	6	FSM	ENSG00000132768.14	ENST00000255108.8	2466	6	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_5	28.93717332429	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTGTTTCTTTTTAAT	43966060	True	NA	12	True	AATAAA	-15	NA	43970009	43973369	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43970323_43970595_43970709_43970965_43971190_43971386_43972071_43972157_43972335_43972414
transcript_80056.known	chr16	+	1687	11	FSM	ENSG00000141013.17	ENST00000536122.7	1687	11	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	31.5746733949854	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCATCCTCTTTCCTGG	90018479	True	NA	18	True	AATGAA	-16	NA	90019642	90043472	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_90019769_90027635_90027723_90031298_90031497_90032717_90032925_90035632_90035688_90036380_90036587_90037231_90037400_90037761_90037849_90040299_90040510_90042469_90042536_90043195
transcript_80058.known	chr16	+	3308	11	FSM	ENSG00000141013.17	ENST00000620723.4	3308	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	41.1155688273919	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACCTGTGGTTTTCACTT	90022589	False	NA	27	True	TATAAA	-27	NA	90022599	90044971	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_90022725_90027635_90027723_90031175_90031497_90032717_90032925_90035632_90035688_90036380_90036587_90037231_90037400_90037761_90037849_90040299_90040510_90042469_90042536_90043195
transcript_80061.known	chr16	+	3094	11	FSM	ENSG00000141013.17	ENST00000268699.9	3094	11	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	34.3920048848566	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTTTATAACCTGT	90022398	True	NA	16	True	TATAAA	-16	NA	90022679	90044960	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_90022725_90027635_90027723_90031298_90031497_90032717_90032925_90035632_90035688_90036380_90036587_90037231_90037400_90037761_90037849_90040299_90040510_90042469_90042536_90043195
transcript_80070.known	chr16	+	3174	10	FSM	ENSG00000141013.17	ENST00000566266.5	3174	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	47.6608388045737	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTGGTTTTCACTTAAAA	90022401	True	NA	31	True	TATAAA	-31	NA	90022682	90044975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_90022725_90027635_90027723_90031175_90031497_90032717_90032925_90036380_90036587_90037231_90037400_90037761_90037849_90040299_90040510_90042469_90042536_90043195
transcript_80080.known	chr16	-	1349	5	FSM	ENSG00000222019.7	ENST00000409873.5	1349	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	3.74165738677394	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCTACTTATTAATTGT	-90047490	False	135	NA	False	AGTAAA	-23	NA	90047625	90039760	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_90040418_90043647_90043990_90044501_90044624_90046956_90047097_90047537
transcript_80082.known	chr16	-	2056	4	FSM	ENSG00000003249.15	ENST00000002501.11	2056	4	0	0	0	0	multi-exon	FALSE	canonical	3	684	junction_3	36.9864840178139	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGGCCACAGTCTCTTC	-90014581	True	NA	-7	True	ATTAAA	-20	NA	90019456	90004870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_90006493_90008783_90008925_90009283_90009431_90019310
transcript_80083.known	chr16	-	2073	4	FSM	ENSG00000003249.15	ENST00000568838.2	2073	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	332.129827360058	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGGCCACAGTCTCTTC	-90019099	True	NA	-7	True	ATTAAA	-20	NA	90019890	90004870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_90006493_90008783_90008925_90009283_90009431_90019727
transcript_80084.known	chr16	-	398	4	FSM	ENSG00000222019.7	ENST00000610227.1	398	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	3.39934634239519	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGAAGACTGGCAGCGGGA	-90047462	False	NA	NA	False	NA	NA	NA	90047597	90043913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_90043990_90044501_90044624_90046956_90047097_90047537
transcript_80085.known	chr16	-	1381	4	FSM	ENSG00000222019.7	ENST00000517889.5	1381	4	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_3	2.05480466765633	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGTTTCCCACTCAGGTT	-90047638	True	NA	NA	False	NA	NA	NA	90047773	90042901	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_-_90043990_90044501_90044624_90046956_90047097_90047742
transcript_80086.known	chr16	+	1492	7	FSM	ENSG00000260528.6	ENST00000660257.1	1492	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	28.6497042839111	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGGTCTTGAACTGCTG	90100116	True	NA	NA	False	NA	NA	NA	90106563	90134900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_90106706_90111371_90111486_90116287_90116484_90128622_90128733_90129796_90129929_90133218_90133435_90134318
transcript_80087.known	chr16	+	1906	4	FSM	ENSG00000260528.6	ENST00000663989.1	1906	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	14.9740516301441	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTTGTGGTCTGTGCTT	90100081	True	NA	NA	False	AATAAA	-13	NA	90106528	90120883	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr16_+_90106706_90111371_90111486_90116287_90116484_90119464
transcript_80088.nic	chr17	-	2560	10	NIC	ENSG00000181031.16	novel	2719	10	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	3.19722101554181	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCACCGAGCCAGTGTGT	-386087	True	NA	-11	True	ATTAAA	-17	NA	386246	212501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_213924_215653_215803_219622_219737_247110_247286_281767_281855_319419_319550_321271_321416_327466_327580_333758_333935_386196
transcript_80089.nic	chr17	-	2472	9	NIC	ENSG00000181031.16	novel	2578	9	NA	NA	-80	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	3.73329613076702	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCACCGAGCCAGTGTGT	NA	False	NA	-11	True	ATTAAA	-17	NA	386334	212501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_213924_215653_215803_219622_219737_247110_247286_281767_281855_319419_319550_321271_321416_327466_327580_386196
transcript_80092.known	chr17	+	1841	2	FSM	ENSG00000187624.9	ENST00000360127.7	1841	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTCCATTATAAAAAGCCT	410044	True	NA	NA	False	CATAAA	-17	NA	410324	414666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_410647_413147
transcript_80094.known	chr17	-	3621	2	FSM	ENSG00000183688.4	ENST00000329099.4	3621	2	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_1	0	176	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGAGAGATGCTTCTGTT	-445922	False	NA	NA	False	AATAAA	-19	NA	445939	439977	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_443495_445835
transcript_80099.known	chr17	-	13089	22	FSM	ENSG00000141252.21	ENST00000437048.7	13089	22	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_18	9.73200997433673	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTCTCCTGAAGTCTT	-709911	True	NA	NA	False	ATTAAA	-18	NA	714839	508667	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_519299_519825_519931_521600_521739_532841_532912_537027_537177_551871_551951_553379_553463_560425_560574_562502_562746_586269_586365_601794_601897_623532_623675_627173_627317_628087_628232_631549_631629_653290_653411_655837_655954_661808_661896_697417_697485_699330_699381_710532_710614_714622
transcript_80108.known	chr17	-	2729	18	FSM	ENSG00000141252.21	ENST00000680069.1	2729	18	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_14	9.69571660142895	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGTTCTGTTTCTTTTGAG	-709833	True	NA	NA	False	AATAAA	-23	NA	714761	536365	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_537177_551871_551951_553379_553463_560425_560574_562502_562746_586269_586365_601794_601897_623532_623675_627173_627317_628087_628232_631549_631629_653290_653411_655837_655954_661808_661896_697417_697485_699330_699381_710532_710614_714622
transcript_80111.known	chr17	-	2237	17	FSM	ENSG00000141252.21	ENST00000679361.1	2237	17	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_13	9.89633770644474	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGATGAGTCTAAAGGAGAT	-709896	True	NA	NA	False	AGTAAA	-6	NA	714824	551615	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_551951_553379_553463_560425_560574_562502_562746_586269_586365_601794_601897_623532_623675_627173_627317_628087_628232_631549_631629_653290_653411_655837_655954_661808_661896_697417_697485_699330_699381_710532_710614_714622
transcript_80112.known	chr17	-	2161	16	FSM	ENSG00000141252.21	ENST00000681154.1	2161	16	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_12	10.6010481662061	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTGATGAGTCTAAAGG	-709911	True	NA	NA	False	AGTAAA	-2	NA	714839	551619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_551951_553379_553463_560425_560574_562502_562746_586269_586365_601794_601897_623532_623675_627173_627317_628087_628232_631549_631629_653290_653411_655837_655954_697417_697485_699330_699381_710532_710614_714622
transcript_80115.known	chr17	-	3070	19	FSM	ENSG00000141252.21	ENST00000571805.6	3070	19	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_15	9.91071249821234	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTCCAGCCTGGGCAACAA	-709929	True	NA	NA	False	NA	NA	NA	714857	532004	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_532912_537027_537177_551871_551951_553379_553463_560425_560574_562502_562746_586269_586365_601794_601897_623532_623675_627173_627317_628087_628232_631549_631629_653290_653411_655837_655954_661808_661896_697417_697485_699330_699381_710532_710614_714622
transcript_80116.known	chr17	-	2695	18	FSM	ENSG00000141252.21	ENST00000291074.10	2695	18	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_14	10.568936661052	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAACAAACAAAA	-709929	True	NA	NA	False	NA	NA	NA	714857	532292	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_532912_537027_537177_551871_551951_553379_553463_560425_560574_562502_562746_586269_586365_601794_601897_623532_623675_627173_627317_628087_628232_631549_631629_653290_653411_655837_655954_697417_697485_699330_699381_710532_710614_714622
transcript_80117.known	chr17	-	2939	7	FSM	ENSG00000141252.21	ENST00000576019.6	2939	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	13.735598518691	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCCGGATTTGTGTGTG	-709881	True	NA	NA	False	CATAAA	-19	NA	714809	651059	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_653411_655837_655954_661808_661896_697417_697485_699330_699381_710532_710614_714622
transcript_80119.known	chr17	-	1369	3	FSM	ENSG00000141252.21	ENST00000571456.2	1369	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	24.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGTGTGATTGTCTTT	-709886	True	NA	-1	True	AATAAA	-14	NA	714814	704999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_706096_710532_710614_714622
transcript_80125.known	chr17	+	2224	5	FSM	ENSG00000167695.15	ENST00000308278.13	2224	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	54.9203969395706	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTCTCATTTGTGAAAT	731398	True	NA	94	True	ATTAAA	-19	NA	732595	742968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_732770_733097_733182_737845_738048_740504_740601_741300
transcript_80129.known	chr17	+	2013	4	FSM	ENSG00000167695.15	ENST00000301324.8	2013	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	58.9293362143734	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGAGTCTTTAATGGGT	731386	True	NA	11	True	NA	NA	NA	732583	742841	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_732770_733097_733182_737845_738048_741300
transcript_80132.known	chr17	+	373	3	FSM	ENSG00000167695.15	ENST00000572018.5	373	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	52	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCGGATCCTTCTCTTCC	731348	True	NA	NA	False	NA	NA	NA	732545	741365	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_732770_733097_733182_741300
transcript_80139.known	chr17	+	2386	4	FSM	ENSG00000167695.15	ENST00000570699.1	2386	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	60.5034434281774	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTAATTGTCTTTTTT	732619	True	NA	9	True	TTTAAA	-13	NA	732676	742883	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_733182_737845_738048_740504_740601_741300
transcript_80140.known	chr17	-	1015	3	FSM	ENSG00000179409.11	ENST00000573482.5	1015	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAGGAGGCAGAACGGGA	-746845	True	NA	NA	False	NA	NA	NA	752185	747166	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_748033_749813_749910_752132
transcript_80141.known	chr17	-	3744	2	FSM	ENSG00000179409.11	ENST00000319004.6	3744	2	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_1	0	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAGAGTTATTTCGTCTT	-746924	True	NA	-10	True	AAAAAG	-25	NA	752264	744420	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_748033_752132
transcript_80142.known	chr17	-	1809	10	FSM	ENSG00000167699.14	ENST00000301328.9	1809	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	327.074952711696	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTGAAATCAAGCTGTG	-771322	True	NA	-20	True	AATAAA	-17	NA	782279	759329	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_760239_769868_769956_770043_770158_770420_770508_771324_771462_775774_775920_776867_776989_778621_778662_780683_780739_782165
transcript_8015.known	chr1	+	2414	6	FSM	ENSG00000132768.14	ENST00000495421.1	2414	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	145.978902585271	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTGTTTCTTTTTAAT	43966060	True	NA	12	True	AATAAA	-15	NA	43970009	43973369	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43970271_43970595_43970709_43970965_43971190_43971386_43972071_43972157_43972335_43972414
transcript_80150.known	chr17	-	2059	9	FSM	ENSG00000167699.14	ENST00000301329.11	1765	9	-61	-233	-47	226	multi-exon	FALSE	canonical	3	689	junction_6	29.7885779284611	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGATGCTATTATACCTT	-771384	True	NA	NA	False	NA	NA	NA	782341	759096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_760239_769868_769956_770043_770158_770420_770508_771324_771462_775774_775920_776867_776989_778694_778745_782165
transcript_80159.known	chr17	-	2737	7	FSM	ENSG00000167699.14	ENST00000576239.5	2737	7	0	0	0	0	multi-exon	FALSE	canonical	3	689	junction_4	31.5119025131775	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGGTTTTGAAAAT	-771337	True	NA	87	True	ATTAAA	-17	NA	782294	759451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_760239_769868_769956_770043_771462_775774_775920_776867_776989_778694_778745_782165
transcript_80165.nic	chr17	-	563	5	ISM	ENSG00000167699.14	ENST00000576419.1	705	7	-52	11193	-37	70	5prime_fragment	FALSE	canonical	3	689	junction_2	17.0642169465815	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTATGAAAAAGATGAAGAA	-771374	True	NA	NA	False	AATGAA	-3	NA	782331	771380	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_771462_775774_775920_776867_776989_778694_778745_782165
transcript_80166.known	chr17	+	1729	4	FSM	ENSG00000171861.11	ENST00000304478.9	1729	4	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_2	38.8615777114391	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTGTTTTGTGTCGTT	777298	True	NA	14	True	AATAAA	-23	NA	782352	792509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_782693_783082_783328_787964_788133_791533
transcript_80168.known	chr17	+	727	3	FSM	ENSG00000171861.11	ENST00000574509.1	727	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	138	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGGAAGATGTAGAAAC	777312	True	NA	NA	False	NA	NA	NA	782366	791766	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_782693_787964_788133_791533
transcript_80169.known	chr17	+	770	2	FSM	ENSG00000171861.11	ENST00000574916.1	770	2	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAGGTGGGGTTTCACCA	777303	True	NA	NA	False	NA	NA	NA	782357	783517	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_782693_783082
transcript_80173.known	chr17	-	3045	8	FSM	ENSG00000167693.17	ENST00000336868.8	3045	8	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_5	17.152378308347	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTTTTGCTTGTGGTCC	NA	False	NA	0	True	NA	NA	NA	979776	799309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_801132_803681_803807_805067_805248_819438_819546_822356_822458_823631_823766_825960_826079_979318
transcript_80176.known	chr17	-	5395	23	FSM	ENSG00000159842.16	ENST00000302538.10	5395	23	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_22	14.0983118384513	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGGTGTGGATGTTT	NA	False	NA	-1	True	AATAAA	-34	NA	1179981	1003518	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1006170_1007164_1007313_1009678_1009785_1010728_1010864_1011845_1011986_1012687_1012798_1013104_1013165_1050049_1050182_1050536_1050635_1056034_1056110_1056997_1057103_1057969_1058046_1058744_1058868_1067076_1067243_1069968_1070091_1072613_1072755_1073624_1073678_1079329_1079391_1083519_1083628_1091664_1091851_1100636_1100736_1125182_1125368_1179666
transcript_80179.known	chr17	-	2673	22	FSM	ENSG00000159842.16	ENST00000291107.6	2673	22	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_21	22.2589379230079	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCTGCCCAGCCCCAGCC	-1109077	False	NA	NA	False	NA	NA	NA	1109100	1005907	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1006170_1007164_1007313_1009678_1009785_1010728_1010864_1011845_1011986_1012687_1012798_1013104_1013165_1050049_1050182_1050536_1050635_1056034_1056110_1056997_1057103_1057969_1058046_1058744_1058868_1067076_1067243_1069968_1070091_1072613_1072755_1073624_1073678_1079329_1079391_1083519_1083628_1091664_1091851_1100636_1100736_1108933
transcript_80180.nnic	chr17	-	4968	22	NNC	ENSG00000159842.16	novel	5395	23	NA	NA	-935	0	at_least_one_novel_splicesite	TRUE	canonical	3	6	junction_21	25.1198487798213	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGGTGTGGATGTTT	-1110012	True	NA	-1	True	AATAAA	-34	NA	1110035	1003518	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_1006170_1007164_1007313_1009678_1009785_1010728_1010864_1011845_1011986_1012687_1012798_1013104_1013165_1050049_1050182_1050536_1050635_1056034_1056110_1056997_1057103_1057969_1058046_1058744_1058868_1067076_1067243_1069968_1070091_1072613_1072755_1073624_1073678_1079329_1079391_1083519_1083628_1091664_1091851_1100636_1100736_1109962
transcript_80186.known	chr17	-	2213	18	FSM	ENSG00000159842.16	ENST00000536794.6	2213	18	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_17	27.5683485328819	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGAGGCAGGGTGGCTGCG	NA	False	NA	NA	False	NA	NA	NA	1079146	1006079	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1006170_1007164_1007313_1009678_1009785_1010728_1010864_1011845_1011986_1012687_1012798_1013104_1013165_1050049_1050182_1050536_1050635_1056034_1056110_1056997_1057103_1057969_1058046_1058744_1058868_1067076_1067243_1069968_1070091_1072613_1072755_1073624_1073678_1078813
transcript_80196.known	chr17	-	1049	8	FSM	ENSG00000159842.16	ENST00000543210.6	1049	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_7	40.663878570645	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCGGGTGGTGGAACCAGC	NA	False	NA	NA	False	NA	NA	NA	1031838	1006060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1006170_1007164_1007313_1009678_1009785_1010728_1010864_1011845_1011986_1012687_1012798_1013104_1013165_1031597
transcript_80201.known	chr17	-	5595	23	FSM	ENSG00000159842.16	ENST00000544583.6	5595	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	25.6278193369421	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTCAGCCCTGTGGTGT	NA	False	NA	-9	True	AATAAA	-26	NA	1187322	1003526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1006170_1007164_1007313_1009678_1009785_1010728_1010864_1011845_1011986_1012687_1012798_1013104_1013165_1050049_1050182_1050536_1050635_1056034_1056110_1056997_1057103_1057969_1058046_1058744_1058868_1067076_1067243_1069968_1070091_1072613_1072755_1073624_1073678_1079329_1079391_1083519_1083628_1091664_1091851_1100636_1100736_1125182_1125368_1186799
transcript_80202.known	chr17	+	3182	4	FSM	ENSG00000177370.5	ENST00000327158.5	3182	4	0	0	0	0	multi-exon	FALSE	canonical	3	568	junction_3	41.811747418904	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCCCATCCTACCTGTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	997128	1003671	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_997381_998778_998976_999511_999585_1001011
transcript_80207.known	chr17	-	1818	7	FSM	ENSG00000108953.17	ENST00000571732.5	1818	7	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_6	5581.5333441826	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCGCGCCTCCATCCTTT	NA	False	NA	-20	True	AATAAA	-25	NA	1400220	1344539	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1345500_1354210_1354348_1361091_1361299_1361901_1362009_1364858_1365059_1369708_1369742_1400046
transcript_80212.known	chr17	-	2052	6	FSM	ENSG00000108953.17	ENST00000264335.13	2052	6	0	0	0	0	multi-exon	FALSE	canonical	3	11131	junction_2	760.132883119787	4048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGTGTAATTATGGATCA	NA	False	NA	-8	True	ATTAAA	-18	NA	1400222	1344274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1345500_1354210_1354348_1361091_1361299_1361901_1362009_1364858_1365059_1400046
transcript_80218.known	chr17	-	739	4	FSM	ENSG00000108953.17	ENST00000573196.5	739	4	0	0	0	0	multi-exon	FALSE	canonical	2	147	junction_2	5517.5288148067	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTCTGTGGATTTTAC	NA	False	NA	NA	False	TTTAAA	-30	NA	1400206	1345257	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1345500_1354210_1354348_1364858_1365059_1400046
transcript_80220.known	chr17	-	465	2	FSM	ENSG00000108953.17	ENST00000489287.1	465	2	0	0	0	0	multi-exon	FALSE	canonical	3	11792	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATGTTATAATGTTTCTG	NA	False	NA	NA	False	NA	NA	NA	1400200	1364747	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1365059_1400046
transcript_80223.known	chr17	-	3850	3	FSM	ENSG00000167193.8	ENST00000300574.3	3850	3	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	53	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATCTTTGAATATTTTTC	-1452456	True	NA	-4	True	AATAAA	-42	NA	1456232	1420692	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1423651_1436619_1437156_1455876
transcript_80225.known	chr17	-	3675	3	FSM	ENSG00000167193.8	ENST00000398970.5	3675	3	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_1	34.5	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTGAATATTTTTCACAA	-1452447	True	NA	0	True	AAAAAG	-4	NA	1456223	1420688	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1423651_1436789_1437156_1455876
transcript_80230.known	chr17	-	4724	32	FSM	ENSG00000197879.17	ENST00000648446.1	4724	32	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_31	46.9342312215061	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTCTCCTTATGAATAT	-1484251	False	1330	0	True	AATAAA	-19	NA	1485760	1464185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1465753_1467241_1467342_1467479_1467578_1467839_1467911_1467987_1468124_1468252_1468309_1468402_1468497_1469530_1469615_1470174_1470335_1470434_1470520_1470620_1470690_1471070_1471148_1471222_1471337_1471906_1472025_1472122_1472229_1474609_1474691_1474811_1474859_1474937_1475033_1477504_1477597_1477890_1477972_1478086_1478193_1478409_1478493_1478615_1478736_1479430_1479503_1479591_1479706_1480526_1480626_1480705_1480886_1482477_1482559_1482860_1483060_1483609_1483726_1484147_1484304_1485693
transcript_80231.known	chr17	-	4714	32	FSM	ENSG00000197879.17	ENST00000361007.7	4714	32	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_31	44.6993890317608	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAAAGCAATACGTGTT	-1490173	False	1509	-26	True	NA	NA	NA	1491682	1464211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1465753_1467241_1467342_1467479_1467578_1467839_1467911_1467987_1468124_1468252_1468309_1468402_1468497_1469530_1469615_1470174_1470335_1470434_1470520_1470620_1470690_1471070_1471148_1471222_1471337_1471906_1472025_1472122_1472229_1474609_1474691_1474811_1474859_1474937_1475033_1477504_1477597_1477890_1477972_1478086_1478193_1478409_1478493_1478615_1478736_1479430_1479503_1479591_1479706_1480526_1480626_1480705_1480886_1482477_1482559_1482860_1483060_1483609_1483726_1484147_1484304_1491599
transcript_80232.known	chr17	-	4931	32	FSM	ENSG00000197879.17	ENST00000648651.1	4931	32	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_31	39.9618965237802	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTCTCCTTATGAATAT	-1491177	True	NA	0	True	AATAAA	-19	NA	1492686	1464185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1465753_1467241_1467342_1467479_1467578_1467839_1467911_1467987_1468124_1468252_1468309_1468402_1468497_1469530_1469615_1470174_1470335_1470434_1470520_1470620_1470690_1471070_1471148_1471222_1471337_1471906_1472025_1472122_1472229_1474609_1474691_1474811_1474859_1474937_1475033_1477504_1477597_1477890_1477972_1478086_1478193_1478409_1478493_1478615_1478736_1479430_1479503_1479591_1479706_1480526_1480626_1480705_1480886_1482477_1482559_1482860_1483060_1483609_1483726_1484147_1484304_1492412
transcript_80243.known	chr17	-	3194	14	FSM	ENSG00000132376.20	ENST00000406424.8	3194	14	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_11	59.4498446059251	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGCAGGGGTAATTATTA	-1516540	False	NA	2	True	NA	NA	NA	1516742	1494608	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1495880_1496059_1496165_1496318_1496403_1496665_1496804_1497935_1498123_1506979_1507090_1508114_1508227_1509177_1509354_1509682_1509800_1513452_1513562_1513871_1513980_1515426_1515586_1515887_1516119_1516455
transcript_80250.known	chr17	-	2880	13	FSM	ENSG00000132376.20	ENST00000320345.10	2880	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_11	53.9615990002767	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGTGCTTGTCCTGCCA	-1516533	False	NA	NA	False	NA	NA	NA	1516735	1494756	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1495880_1496059_1496165_1496318_1496403_1496665_1496804_1497935_1498123_1506979_1507090_1508114_1508227_1509177_1509354_1509682_1509800_1513452_1513562_1513871_1513980_1515887_1516119_1516455
transcript_80253.known	chr17	-	2706	12	FSM	ENSG00000132376.20	ENST00000421807.7	2706	12	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_7	21.5299138428988	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGCGTGTGACTGATGA	-1515241	True	NA	-6	True	NA	NA	NA	1516612	1494576	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1495880_1496059_1496165_1496318_1496403_1496665_1496804_1497935_1498123_1506979_1507090_1508114_1508227_1509177_1509354_1509682_1509800_1513452_1513562_1513871_1513980_1516455
transcript_80258.nic	chr17	-	2887	11	NIC	ENSG00000132376.20	novel	2706	12	NA	NA	-160	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_9	46.8552024859567	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGCGTGTGACTGATGA	NA	False	NA	-6	True	NA	NA	NA	1516902	1494576	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_1495880_1496059_1496165_1496318_1496403_1496665_1496804_1497935_1498123_1506979_1507090_1508114_1508227_1509177_1509354_1509682_1509800_1513871_1513980_1516455
transcript_80261.known	chr17	-	3612	12	NNC	ENSG00000174238.16	novel	3888	12	NA	NA	1	-275	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	185.361206457835	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTTTCTGGAGTCCAGT	-1558603	True	NA	-5	True	AATAAA	-10	NA	1562791	1517992	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_1520539_1521578_1521646_1534098_1534222_1535181_1535293_1535440_1535519_1538868_1538953_1541565_1541641_1541641_1541650_1548295_1548388_1553003_1553150_1558528_1558560_1562540
transcript_80263.known	chr17	-	3888	12	FSM	ENSG00000174238.16	ENST00000313486.12	3888	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	185.361206457835	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTACCAAACAAGCAAAACAT	-1558604	True	NA	NA	False	NA	NA	NA	1562792	1517717	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1520539_1521578_1521646_1534098_1534222_1535181_1535293_1535440_1535519_1538868_1538953_1541565_1541641_1543019_1543028_1548295_1548388_1553003_1553150_1558528_1558560_1562540
transcript_80264.nic	chr17	-	3515	12	NIC	ENSG00000174238.16	novel	3888	12	NA	NA	-17	-275	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	216.046291335908	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTTTCTGGAGTCCAGT	-1558621	True	NA	-5	True	AATAAA	-10	NA	1562809	1517992	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_1520539_1521578_1521646_1534098_1534222_1535181_1535293_1535440_1535519_1538868_1538953_1541565_1541641_1543019_1543028_1548295_1548388_1553003_1553150_1558528_1558560_1562655
transcript_80271.known	chr17	+	542	2	FSM	ENSG00000236618.3	ENST00000425081.3	601	2	54	5	54	-5	multi-exon	FALSE	canonical	3	158	junction_1	0	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTACAAAGTGTAGTTTGT	1512446	True	NA	9	True	AATAAA	-18	NA	1516930	1518096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_1517094_1517717
transcript_80273.known	chr17	-	3261	15	FSM	ENSG00000167703.15	ENST00000571650.5	3261	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	32.3167518321318	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCATGTGCCTATTTTGA	-1627588	False	NA	4	True	NA	NA	NA	1628341	1574371	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1575766_1576596_1576721_1578249_1578324_1583203_1583337_1585912_1586052_1586948_1586961_1590801_1590949_1591268_1591472_1591565_1591700_1593186_1593280_1613194_1613272_1614978_1615035_1616561_1616770_1627714_1627921_1628080
transcript_80274.nic	chr17	-	3284	15	NIC	ENSG00000167703.15	novel	3261	15	NA	NA	-56	0	intron_retention	FALSE	canonical	0	0	junction_5	32.9263246831902	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCATGTGCCTATTTTGA	-1627644	False	NA	4	True	NA	NA	NA	1628397	1574371	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_1575766_1576596_1576721_1578249_1578324_1583203_1583337_1585912_1586052_1586948_1586961_1590801_1590949_1591268_1591472_1591565_1591700_1593186_1593280_1613194_1613272_1614978_1615035_1616561_1616770_1627714_1627921_1628113
transcript_80283.known	chr17	-	8133	14	FSM	ENSG00000167703.15	ENST00000301335.10	8133	14	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_13	14.3452773500034	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGAGCGGCTTCCTCCTT	-1628081	True	NA	-1	True	AATAAA	-17	NA	1628834	1569267	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1575766_1576596_1576721_1578249_1578324_1583203_1583337_1585912_1586052_1590801_1590949_1591268_1591472_1591565_1591700_1593186_1593280_1613194_1613272_1614978_1615035_1616561_1616770_1627714_1627921_1628793
transcript_80287.nic	chr17	-	2875	13	NIC	ENSG00000167703.15	novel	8133	14	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_11	24.2275096165954	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCATGTGCCTATTTTGA	-1628135	True	NA	4	True	NA	NA	NA	1628888	1574371	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_1575766_1576596_1576721_1578249_1578324_1583203_1583337_1585912_1586052_1590801_1590949_1591268_1591472_1591565_1591700_1593186_1593280_1613194_1613272_1614978_1615035_1627714_1627921_1628793
transcript_80291.known	chr17	-	1658	10	FSM	ENSG00000167703.15	ENST00000412517.3	1658	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	26.3457542202173	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGCCAGCGTTCACGCTC	NA	False	NA	NA	False	NA	NA	NA	1605085	1575500	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1575766_1576596_1576721_1578249_1578324_1583203_1583337_1585912_1586052_1590801_1590949_1591268_1591472_1591565_1591700_1593186_1593280_1604739
transcript_80293.known	chr17	-	3428	11	FSM	ENSG00000074660.17	ENST00000263071.9	3428	11	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_8	4.10487515035476	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGTAAAACGGAGATTTC	-1645643	False	NA	NA	False	AATAAA	-25	NA	1645732	1633857	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1635618_1636708_1636856_1636940_1637063_1638805_1638927_1639638_1639743_1639911_1640041_1640447_1640667_1643441_1643968_1644833_1644936_1645177_1645240_1645596
transcript_80294.known	chr17	-	1560	8	FSM	ENSG00000167705.12	ENST00000301336.7	1560	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	50.1182275693572	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTCCTCGCCTGTCTGTC	-1649780	False	NA	-9	True	AATAAA	-24	NA	1649866	1646149	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1646620_1646905_1646990_1647834_1647958_1648349_1648496_1648798_1649045_1649199_1649307_1649411_1649506_1649576
transcript_80298.nnic	chr17	-	891	4	NIC	ENSG00000167705.12	novel	1560	8	NA	NA	20	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	50.9116882454314	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTCCTCGCCTGTCTGTC	-1648928	False	NA	-9	True	AATAAA	-24	NA	1649012	1646149	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_1646620_1646905_1646990_1647834_1647958_1648798
transcript_80300.known	chr17	-	7280	43	FSM	ENSG00000174231.17	ENST00000304992.11	7280	43	0	0	0	0	multi-exon	FALSE	canonical	3	657	junction_29	202.864229699595	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCAGGGGCTGGTTTGTTT	-1663506	True	NA	-8	True	AATAAA	-30	NA	1684867	1650628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1650957_1651107_1651311_1651413_1651554_1651647_1651789_1653541_1653684_1653776_1654017_1655349_1655544_1656391_1656566_1656647_1656762_1658252_1658382_1658525_1658764_1659356_1659549_1659840_1660002_1660431_1660579_1660697_1660828_1660992_1661163_1661270_1661407_1661610_1661791_1661905_1662154_1673080_1673198_1673356_1673568_1673745_1673893_1674441_1674681_1675151_1675340_1675619_1675813_1675927_1676055_1676206_1676371_1676504_1676712_1676975_1677173_1677564_1677695_1678517_1678653_1678761_1678882_1679016_1679207_1679290_1679411_1679608_1679800_1680725_1680832_1680928_1681055_1681477_1681691_1681819_1682039_1682128_1682294_1683532_1683702_1684471_1684583_1684779
transcript_80311.nic	chr17	-	1701	11	ISM	ENSG00000174231.17	ENST00000304992.11	7280	43	-2	28387	-2	-575	5prime_fragment	FALSE	canonical	3	669	junction_10	47.1750993639653	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGCATTGGACCCTAGG	-1663508	True	NA	0	True	NA	NA	NA	1684869	1679015	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_1679207_1679290_1679411_1679608_1679800_1680725_1680832_1680928_1681055_1681477_1681691_1681819_1682039_1682128_1682294_1683532_1683702_1684471_1684583_1684779
transcript_80314.known	chr17	-	865	3	FSM	ENSG00000174231.17	ENST00000571346.1	865	3	0	0	0	0	multi-exon	FALSE	canonical	3	669	junction_2	72.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCGTCTCAAAAAAAAAAAAA	-1663491	True	NA	NA	False	NA	NA	NA	1684852	1683020	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1683702_1684471_1684583_1684779
transcript_80315.known	chr17	+	3315	10	FSM	ENSG00000167716.19	ENST00000419248.5	3315	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	13.5973853695808	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGGCTTGTCTTTTTTTT	NA	False	NA	18	True	AATAAA	-26	NA	1724539	1738594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_1724787_1730379_1730488_1730754_1730946_1731067_1731259_1732324_1732491_1732665_1732832_1733526_1734217_1735571_1735718_1736038_1736219_1737364
transcript_80318.nic	chr17	-	2713	3	ISM	ENSG00000186594.15	ENST00000577164.2	2876	4	920	7	3	-3	3prime_fragment	FALSE	canonical	2	3	junction_2	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCAGTGTTATTATTTAA	-1716146	True	NA	NA	False	AATATA	-8	NA	1716254	1711509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_1714015_1714370_1714454_1716129
transcript_80320.known	chr17	-	2626	2	FSM	ENSG00000186594.15	ENST00000574306.2	2633	2	0	7	0	-4	multi-exon	FALSE	canonical	2	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATCAGTGTTATTATTTA	-1716143	True	NA	NA	False	AATATA	-7	NA	1716251	1711510	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1714015_1716129
transcript_80321.known	chr17	+	6982	10	FSM	ENSG00000167716.19	ENST00000409644.6	6982	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	7.5293663760433	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGTGAACTGAGGCTTGT	NA	False	NA	9	True	AATAAA	-17	NA	1724703	1738585	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_1728627_1730379_1730488_1730754_1730946_1731067_1731259_1732324_1732491_1732665_1732832_1733526_1734217_1735571_1735718_1736038_1736219_1737364
transcript_80322.nic	chr17	+	1322	2	ISM	ENSG00000167711.14	ENST00000382061.5	2262	10	9587	0	9587	0	3prime_fragment	FALSE	canonical	3	11	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGGTTTGATGTCACC	NA	False	NA	2	True	AATAAA	-13	NA	1752612	1755265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_1752791_1754121
transcript_80325.known	chr17	+	1438	8	FSM	ENSG00000132386.11	ENST00000254722.9	1438	8	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	17.4636649027841	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTACTTCGTTCCTC	1759607	True	NA	16	True	AATAAA	-17	NA	1762059	1777565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_1762114_1766902_1766995_1769851_1770051_1771028_1771185_1771871_1772076_1775057_1775201_1776531_1776743_1777186
transcript_80326.nic	chr17	+	1474	8	NIC	ENSG00000132386.11	novel	459	4	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	63.0225097460731	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTACTTCGTTCCTC	1762723	True	NA	16	True	AATAAA	-17	NA	1762793	1777565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_1762884_1766902_1766995_1769851_1770051_1771028_1771185_1771871_1772076_1775057_1775201_1776531_1776743_1777186
transcript_8033.known	chr1	-	2044	4	FSM	ENSG00000285649.1	ENST00000647729.1	2044	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.35702260395516	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTCTATAGCCCTCCTC	NA	False	NA	NA	False	AATACA	-13	NA	43974821	43968350	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_43969644_43970040_43970308_43973363_43973469_43974442
transcript_8034.known	chr1	+	1664	7	FSM	ENSG00000117410.14	ENST00000473485.5	1664	7	0	0	0	0	multi-exon	FALSE	canonical	3	1545	junction_6	74.5490144505986	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGCAGCTTCTGTTGCC	43966155	True	NA	5	True	AATAAA	-18	NA	43974971	43978292	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43975849_43976089_43976174_43976301_43976380_43976589_43976660_43976772_43976825_43977025_43977217_43977980
transcript_80344.known	chr17	+	4847	17	FSM	ENSG00000132383.12	ENST00000254719.10	4847	17	0	0	0	0	multi-exon	FALSE	canonical	3	810	junction_8	68.6626718093609	1598	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAGTAAATGTTTAAGAAA	1822259	True	NA	NA	False	NA	NA	NA	1830004	1900082	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_1830127_1842802_1842854_1843919_1843999_1844577_1844687_1853100_1853190_1872433_1872527_1875660_1875794_1877211_1877315_1878992_1879062_1879214_1879408_1879559_1879700_1880542_1880692_1883811_1883945_1888674_1888852_1891832_1891941_1895008_1895096_1897070
transcript_8035.nnic	chr1	+	2092	8	NNC	ENSG00000117411.18	novel	2193	7	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	3	junction_1	226.502511586742	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCTCCCTTGTCTGTTTG	43975586	True	NA	14	True	AGTAAA	-14	NA	43979176	43991168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_43979284_43979417_43979512_43981108_43981474_43981688_43981925_43984864_43985056_43985277_43985401_43985516_43985622_43990297
transcript_80363.known	chr17	-	4405	11	FSM	ENSG00000186532.12	ENST00000305513.12	4405	11	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	14.4761873433581	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTGAGATGGAGTTTCA	-1828141	True	NA	38	True	NA	NA	NA	1829902	1779484	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1781440_1783034_1783159_1783359_1783477_1784325_1784462_1786809_1786974_1787421_1787605_1799856_1801025_1804625_1804716_1811970_1812116_1827860_1828007_1829725
transcript_8037.nic	chr1	+	2078	7	NIC	ENSG00000117411.18	novel	360	2	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	241.068743077341	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCTCCCTTGTCTGTTTG	43978852	False	NA	14	True	AGTAAA	-14	NA	43978896	43991168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_43979084_43981108_43981474_43981688_43981925_43984864_43985056_43985277_43985401_43985516_43985622_43990297
transcript_80381.nic	chr17	-	2724	10	ISM	ENSG00000186532.12	ENST00000305513.12	4405	11	-7	3283	-7	342	5prime_fragment	FALSE	canonical	3	89	junction_8	10.9657153702003	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTCCTCCTGGGAGATA	-1828148	True	NA	NA	False	NA	NA	NA	1829909	1782767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_1783159_1783359_1783477_1784325_1784462_1786809_1786974_1787421_1787605_1799856_1801025_1804625_1804716_1811970_1812116_1827860_1828007_1829725
transcript_8039.known	chr1	+	2271	7	FSM	ENSG00000117411.18	ENST00000434555.7	2271	7	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	223.955662774775	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTGTACATTGCACAG	43975588	True	NA	-44	True	NA	NA	NA	43979178	43991110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43979617_43981108_43981474_43981688_43981925_43984864_43985056_43985277_43985401_43985516_43985622_43990297
transcript_80394.known	chr17	-	3614	2	FSM	ENSG00000185924.7	ENST00000331238.7	3614	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTTTTTCATTTCCTAA	-2025300	True	NA	2	True	AATAAA	-17	NA	2025334	1934676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_1937809_2024852
transcript_80399.known	chr17	+	2607	13	FSM	ENSG00000108963.19	ENST00000571418.7	2607	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	53.2139288365577	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGAGGGTTTCTGAGATT	2027993	True	NA	14	True	AATAAA	-25	NA	2030158	2043898	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_2030231_2033504_2033658_2033778_2033843_2035969_2036092_2036528_2036654_2036834_2036957_2039754_2039824_2040217_2040375_2040504_2040606_2041102_2041182_2041480_2041622_2041767_2041876_2042604
transcript_8040.known	chr1	+	2193	7	FSM	ENSG00000117411.18	ENST00000372324.6	2193	7	0	0	0	0	multi-exon	FALSE	canonical	3	452	junction_1	75.7226298187448	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCTCCCTTGTCTGTTTG	43975619	True	NA	14	True	AGTAAA	-14	NA	43979209	43991168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43979512_43981108_43981474_43981688_43981925_43984864_43985056_43985277_43985401_43985516_43985622_43990297
transcript_80405.known	chr17	+	2646	13	FSM	ENSG00000108963.19	ENST00000263083.12	2646	13	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_12	21.5153369070118	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGAGGGTTTCTGAGATT	2027987	True	NA	14	True	AATAAA	-25	NA	2030152	2043898	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_2030231_2033504_2033658_2033778_2033843_2035969_2036092_2036528_2036687_2036834_2036957_2039754_2039824_2040217_2040375_2040504_2040606_2041102_2041182_2041480_2041622_2041767_2041876_2042604
transcript_80408.nnic	chr17	+	2220	13	NNC	ENSG00000108963.19	novel	2646	13	NA	NA	0	-475	intron_retention	FALSE	canonical	2	3	junction_10	55.2916509670915	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTGAGCATCTTTTTCC	2027987	True	NA	16	True	AATAAA	-12	NA	2030152	2043423	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_2030231_2033504_2033658_2033778_2033843_2035969_2036092_2036528_2036687_2036834_2036957_2039754_2039824_2040217_2040375_2040504_2040606_2041102_2041231_2041480_2041622_2041767_2041876_2042604
transcript_8041.known	chr1	+	2004	7	FSM	ENSG00000117411.18	ENST00000309519.8	2004	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	241.812886799323	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCCCTTGTCTGTTTGGG	43979803	True	NA	16	True	AGTAAA	-16	NA	43979935	43991170	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43980047_43981108_43981474_43981688_43981925_43984864_43985056_43985277_43985401_43985516_43985622_43990297
transcript_80424.known	chr17	+	2518	12	FSM	ENSG00000108963.19	ENST00000575667.6	2518	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	56.7831892245619	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGAGGGTTTCTGAGATT	2027993	True	NA	14	True	AATAAA	-25	NA	2030158	2043898	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_2030231_2033504_2033658_2033778_2033843_2036528_2036687_2036834_2036957_2039754_2039824_2040217_2040375_2040504_2040606_2041102_2041182_2041480_2041622_2041767_2041876_2042604
transcript_8043.known	chr1	+	2629	7	FSM	ENSG00000117411.18	ENST00000356836.10	2629	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	231.023567821313	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCTCCCTTGTCTGTTTG	43979784	False	NA	14	True	AGTAAA	-14	NA	43979876	43991168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43980615_43981108_43981474_43981688_43981925_43984864_43985056_43985277_43985401_43985516_43985622_43990297
transcript_80436.known	chr17	+	991	6	FSM	ENSG00000108963.19	ENST00000576129.5	991	6	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_5	25.1029878699728	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCGGACAGCTAACAAGCA	2028020	True	NA	NA	False	NA	NA	NA	2030185	2037283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_2030231_2033504_2033658_2033778_2033843_2035969_2036092_2036528_2036687_2036834
transcript_80438.known	chr17	+	1345	5	FSM	ENSG00000108963.19	ENST00000572819.6	1345	5	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_4	25.1731503789256	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGAGGGCCTGATGGGG	2028001	True	NA	NA	False	NA	NA	NA	2030166	2037181	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_2030231_2033504_2033658_2033778_2033843_2035969_2036687_2036834
transcript_8044.nic	chr1	-	3696	15	NIC	ENSG00000196517.13	novel	3206	14	NA	NA	-323	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	16.5085012113425	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCTGCTGTGCTTTGTCT	-44031779	False	11	0	True	AATGAA	-21	NA	44031790	43996482	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_43997740_43997854_43998026_44000766_44000868_44000955_44001056_44001163_44001299_44001389_44001628_44002312_44002417_44002511_44002647_44002852_44002986_44008352_44008624_44009964_44010097_44010725_44010883_44011560_44011723_44024247_44024363_44031305
transcript_80442.known	chr17	+	1031	2	FSM	ENSG00000262664.3	ENST00000572195.3	1031	2	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_1	0	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAGCATCTTTTTCCTG	2039431	True	NA	18	True	AATAAA	-14	NA	2042021	2043425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_2042232_2042604
transcript_80444.known	chr17	-	5974	19	FSM	ENSG00000070366.14	ENST00000263073.11	5974	19	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_18	13.6950923894494	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACCTCTTGCTGATCTG	-2301851	True	NA	-4	True	AATAAA	-20	NA	2303785	2059842	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_2061623_2065072_2065155_2065467_2065680_2068777_2068932_2081809_2081957_2085724_2085902_2172657_2172860_2186662_2186832_2188398_2188516_2236491_2236638_2244657_2244720_2282646_2282860_2283624_2283736_2292551_2292631_2292870_2292978_2297242_2297354_2297862_2298056_2298905_2300665_2303632
transcript_80452.nic	chr17	-	840	2	ISM	ENSG00000070366.14	ENST00000263073.11	5974	19	-127	240262	-127	-113368	5prime_fragment	FALSE	canonical	3	30	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAGGATGGGAAAAGG	-2303876	True	NA	NA	False	GGGGCT	-16	NA	2303912	2300104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_2300665_2303632
transcript_80460.known	chr17	-	4245	15	FSM	ENSG00000167721.11	ENST00000301364.10	4245	15	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_7	62.143226599887	234	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCCATTGCCTGGATCA	-2321779	True	NA	-21	True	AATAAA	-18	NA	2336457	2322395	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_2324375_2324503_2324579_2324688_2324830_2325303_2325421_2329342_2329476_2330514_2330626_2330946_2331110_2332168_2332360_2332960_2333125_2333556_2333717_2334471_2334897_2335259_2335395_2335510_2335731_2336036_2336141_2336330
transcript_80489.known	chr17	+	2482	8	FSM	ENSG00000167720.13	ENST00000344595.10	2482	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	9.84160265694276	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGACCTGCAGGGTCTG	2303123	True	NA	7	True	AATAAA	-24	NA	2303949	2325260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_2304018_2315556_2315729_2317869_2317997_2318825_2318930_2321305_2321426_2321541_2321617_2323135_2323346_2323654
transcript_8049.known	chr1	-	3119	14	FSM	ENSG00000196517.13	ENST00000673836.1	3119	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_13	12.8173329389791	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTATTCCTGTCTCTGA	-44031166	False	NA	-20	True	AATGAA	-1	NA	44031177	43996502	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_43997740_43997854_43998026_44000766_44000868_44000955_44001056_44001163_44001299_44001389_44001628_44002312_44002417_44002511_44002647_44002852_44002986_44008352_44008624_44009964_44010097_44010725_44010883_44024247_44024363_44031087
transcript_8050.known	chr1	-	3206	14	FSM	ENSG00000196517.13	ENST00000372310.8	3206	14	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	5.86434417001413	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCTGCTGTGCTTTGTCT	-44031451	False	NA	0	True	AATGAA	-21	NA	44031462	43996482	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_43997740_43997854_43998026_44000766_44000868_44000955_44001056_44001163_44001299_44001389_44001628_44002312_44002417_44002511_44002647_44002852_44002986_44008352_44008624_44009964_44010097_44010725_44010883_44024247_44024363_44031305
transcript_80504.known	chr17	+	4878	24	FSM	ENSG00000141258.13	ENST00000268989.8	4878	24	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_11	28.10189399533	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGCCTCTGGGACTGGA	2335957	True	NA	20	True	AATAAA	-16	NA	2337500	2381054	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_2337746_2343544_2343621_2361636_2361800_2362108_2362271_2362837_2362906_2362988_2363135_2363464_2363600_2364058_2364184_2364595_2364664_2364896_2365058_2365214_2365342_2367270_2367406_2371261_2371416_2372189_2372255_2372342_2372489_2372952_2373082_2373330_2373514_2375491_2375876_2376136_2376262_2376732_2376816_2376958_2377069_2377856_2377954_2379035_2379204_2379431
transcript_80509.known	chr17	+	4734	23	FSM	ENSG00000141258.13	ENST00000426855.6	4734	23	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_5	16.928446888288	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCTGGGACTGGACACT	2335970	False	NA	24	True	AATAAA	-20	NA	2337513	2381058	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_2337746_2343544_2343621_2361636_2361800_2362108_2362271_2362837_2362906_2362988_2363135_2363464_2363600_2364058_2364184_2364595_2364664_2364896_2365058_2365214_2365342_2371261_2371416_2372189_2372255_2372342_2372489_2372952_2373082_2373330_2373514_2375491_2375876_2376136_2376262_2376732_2376816_2376958_2377069_2377856_2377954_2379035_2379204_2379431
transcript_80538.known	chr17	-	4925	6	FSM	ENSG00000070444.15	ENST00000174618.5	4925	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	2.24499443206436	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAGCTGCCAGCCTGCA	-2399895	True	NA	-12	True	AATAAA	-36	NA	2401060	2384072	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_2387650_2387856_2388050_2394042_2394155_2394304_2394347_2394874_2395455_2400639
transcript_80545.nic	chr17	-	2843	11	NIC	ENSG00000127804.13	novel	5740	10	NA	NA	-62	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	49.8822613761646	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGCCATGGTCTCTTTA	NA	False	NA	-7	True	AATAAA	-33	NA	2511953	2416048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_2416698_2419659_2420597_2420730_2420905_2438108_2438199_2441489_2441560_2464207_2464351_2467760_2467877_2473523_2473665_2477685_2477886_2502203_2502332_2511758
transcript_80546.nnic	chr17	-	4472	11	NNC	ENSG00000127804.13	novel	5740	10	NA	NA	-62	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	50.7394323972983	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGCCATGGTCTCTTTA	NA	False	NA	-7	True	AATAAA	-33	NA	2511953	2416048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_2417174_2418506_2420597_2420730_2420905_2438108_2438199_2441489_2441560_2464207_2464351_2467760_2467877_2473523_2473665_2477685_2477886_2502203_2502332_2511758
transcript_8055.nnic	chr1	-	3202	13	NIC	ENSG00000196517.13	novel	3206	14	NA	NA	-148	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_11	12.590505682193	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCTGCTGTGCTTTGTCT	-44030992	True	NA	0	True	AATGAA	-21	NA	44031615	43996482	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_43997740_43997854_43998026_44000766_44000868_44000955_44001056_44001163_44001299_44001389_44001628_44002312_44002417_44002511_44002647_44002852_44002986_44008352_44008624_44009964_44010097_44024247_44024363_44031305
transcript_80550.nnic	chr17	-	3403	11	NNC	ENSG00000127804.13	novel	5740	10	NA	NA	-3	-1001	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	50.7394323972983	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACCCATGAGCAGGCCAG	-2508382	True	NA	NA	False	NA	NA	NA	2511894	2417058	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_2417174_2418506_2420597_2420730_2420905_2438108_2438199_2441489_2441560_2464207_2464351_2467760_2467877_2473523_2473665_2477685_2477886_2502203_2502332_2511758
transcript_80552.nnic	chr17	-	2951	11	NNC	ENSG00000127804.13	novel	5740	10	NA	NA	-6	-1001	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	50.7394323972983	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACCCATGAGCAGGCCAG	-2508385	True	NA	NA	False	NA	NA	NA	2511897	2417058	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_2417174_2418961_2420597_2420730_2420905_2438108_2438199_2441489_2441560_2464207_2464351_2467760_2467877_2473523_2473665_2477685_2477886_2502203_2502332_2511758
transcript_80560.known	chr17	-	5740	10	FSM	ENSG00000127804.13	ENST00000263092.11	5740	10	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_8	16.164280083483	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGCCATGGTCTCTTTA	-2508376	True	NA	-7	True	AATAAA	-33	NA	2511888	2416048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_2420597_2420730_2420905_2438108_2438199_2441489_2441560_2464207_2464351_2467760_2467877_2473523_2473665_2477685_2477886_2502203_2502332_2511758
transcript_80570.nic	chr17	-	1048	9	ISM	ENSG00000127804.13	ENST00000263092.11	5740	10	-6	4832	-3	-696	5prime_fragment	FALSE	canonical	3	135	junction_7	16.1666129724194	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAGAGAAACCGAGAAAACC	-2508382	True	NA	NA	False	AAGAAA	-2	NA	2511894	2420880	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_2420905_2438108_2438199_2441489_2441560_2464207_2464351_2467760_2467877_2473523_2473665_2477685_2477886_2502203_2502332_2511758
transcript_80576.nnic	chr17	-	947	7	NNC	ENSG00000127804.13	novel	5740	10	NA	NA	-62	-1001	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	63.2703634325652	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACCCATGAGCAGGCCAG	NA	False	NA	NA	False	NA	NA	NA	2511953	2417058	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_2417174_2464298_2464351_2467760_2467877_2473523_2473665_2477685_2477886_2502203_2502332_2511758
transcript_80577.known	chr17	-	575	4	FSM	ENSG00000127804.13	ENST00000576976.2	575	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	76.4387917806717	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAATGTCTTCTGCTTTA	-2508377	True	NA	NA	False	NA	NA	NA	2511889	2467760	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_2467877_2477685_2477886_2502203_2502332_2511758
transcript_80578.known	chr17	+	5337	12	FSM	ENSG00000007168.14	ENST00000674608.1	5337	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	202.882777700827	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTAGATGTGATTTTTT	2591607	True	NA	12	True	ATTAAA	-41	NA	2593952	2685608	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_2594007_2638098_2638321_2662780_2662835_2665371_2665457_2666015_2666091_2666991_2667199_2670162_2670332_2672654_2672758_2674059_2674289_2676504_2676607_2680163_2680321_2681728
transcript_80580.known	chr17	+	5589	11	FSM	ENSG00000007168.14	ENST00000397195.10	5589	11	0	0	0	0	multi-exon	FALSE	canonical	3	493	junction_3	29.6292085618229	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGATTTTTTTTTTTTT	2589236	True	NA	19	True	ATTAAA	-15	NA	2593653	2685615	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_2594007_2638098_2638321_2665371_2665457_2666015_2666091_2666991_2667199_2670162_2670332_2672654_2672758_2674059_2674289_2676504_2676607_2680163_2680321_2681728
transcript_80584.known	chr17	+	5204	10	FSM	ENSG00000007168.14	ENST00000676353.1	5204	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	163.574047867632	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTAGATGTGATTTTTT	2591601	True	NA	12	True	ATTAAA	-41	NA	2593946	2685608	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_2594007_2638098_2638321_2666015_2666091_2666991_2667199_2670162_2670332_2672654_2672758_2674059_2674289_2676504_2676607_2680163_2680321_2681728
transcript_80591.nnic	chr17	+	1045	3	NNC	ENSG00000007168.14	novel	694	4	NA	NA	-28	4426	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	254	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATGTTCTTTGTTTGTTT	2589208	True	NA	8	True	AATAAA	-13	NA	2593625	2643074	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_2594007_2638098_2638321_2642632
transcript_80594.known	chr17	-	5224	26	FSM	ENSG00000132361.18	ENST00000435359.5	5224	26	0	0	0	0	multi-exon	TRUE	canonical	3	117	junction_15	48.1356416805676	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCTCACCTGTGTGTT	-2711612	False	NA	-9	True	AATAAA	-23	NA	2711633	2689385	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_2690778_2691608_2691683_2691760_2691896_2692003_2692098_2692360_2692483_2692570_2692697_2692779_2692861_2693899_2694040_2694122_2694277_2694479_2694565_2694856_2695102_2695217_2695281_2695373_2695527_2696158_2696260_2696433_2696536_2696718_2696943_2697895_2698591_2700381_2700475_2700677_2700826_2701139_2701266_2701365_2701521_2701612_2701738_2701913_2702058_2703317_2703490_2704361_2704565_2711561
transcript_80595.known	chr17	-	5357	26	FSM	ENSG00000132361.18	ENST00000651024.2	5357	26	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_15	42.6829427289169	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGGCTCACCTGTGTGT	-2704841	True	NA	-10	True	AATAAA	-22	NA	2711764	2689386	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_2690778_2691608_2691683_2691760_2691896_2692003_2692098_2692360_2692483_2692570_2692697_2692779_2692861_2693899_2694040_2694122_2694277_2694479_2694565_2694856_2695102_2695217_2695281_2695373_2695527_2696158_2696260_2696433_2696539_2696718_2696943_2697895_2698591_2700381_2700475_2700677_2700826_2701139_2701266_2701365_2701521_2701612_2701738_2701913_2702058_2703317_2703490_2704361_2704565_2711561
transcript_80610.known	chr17	+	443	2	FSM	ENSG00000262050.1	ENST00000572876.1	443	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTTCTCGGCCGGGCGG	2712215	False	NA	NA	False	TTTAAA	-29	NA	2712308	2712833	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_2712400_2712481
transcript_80611.known	chr17	-	3147	1	ISM	ENSG00000277200.2	ENST00000614400.2	4643	4	25705	0	25705	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGAGTCCAATCTCTTGCA	-2723846	False	NA	0	True	AATAAA	-15	NA	2723947	2720800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_2720800_2723900
transcript_80612.nnic	chr17	-	755	4	NNC	ENSG00000277200.2	novel	4643	4	NA	NA	-3	-6393	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	7.48331477354788	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAAACATGTGGCCAGGC	-2748567	True	NA	-11	True	AATAAA	-16	NA	2749655	2727193	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_2727503_2730445_2730494_2735015_2735169_2749410
transcript_80619.nnic	chr17	+	6838	24	NNC	ENSG00000132359.15	novel	606	6	NA	NA	57276	0	intron_retention	TRUE	canonical	3	108	junction_3	18.527657760208	56	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTTCAGAGTTCTTTG	2853676	False	NA	29	True	AATAAA	-19	NA	2853757	3037741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_2854103_2905283_2905369_2957758_2957795_2962669_2962715_2963429_2963463_2963855_2964069_2965539_2965644_2980286_2980366_2981194_2981249_2984982_2985067_2991296_2991398_2995336_2995467_2998220_2998377_3005368_3005441_3005954_3006042_3008010_3008146_3018060_3018199_3020476_3020596_3026007_3026122_3026349_3026465_3026943_3027071_3030921_3030999_3032410_3032450_3033391
transcript_8063.known	chr1	-	1881	12	FSM	ENSG00000196517.13	ENST00000475075.6	1881	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	14.4353789451215	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGGACGGCTGCTGTCA	-44031375	False	NA	NA	False	NA	NA	NA	44031386	43997442	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_43997740_43997854_43998026_44000766_44000868_44000955_44001056_44001163_44001299_44001389_44001628_44002312_44002417_44002511_44002647_44002852_44002986_44008352_44008624_44024247_44024363_44031305
transcript_80635.nnic	chr17	+	2898	3	NNC	ENSG00000132359.15	novel	3175	26	NA	NA	57202	-47938	at_least_one_novel_splicesite	FALSE	canonical	3	143	junction_2	1	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAATACCTCTAGCAAAAT	2853247	True	NA	NA	False	AAAACA	-10	NA	2853683	2960152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_2854103_2905283_2905369_2957758
transcript_80645.known	chr17	-	3788	7	FSM	ENSG00000197417.9	ENST00000225519.5	3788	7	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_2	11.5289490703475	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTGCCTTTTTTTT	-3629614	True	NA	NA	False	AAAAAG	-13	NA	3636250	3608239	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_3610973_3615336_3615538_3621236_3621413_3623338_3623492_3624047_3624232_3630204_3630347_3636051
transcript_80649.nnic	chr17	-	3275	6	NIC	ENSG00000197417.9	novel	3788	7	NA	NA	-42	-354	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	93.0453652795237	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCCCTTGTGCATTGTT	-3629656	True	NA	-2	True	ATTAAA	-27	NA	3636292	3608593	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_3610973_3621236_3621413_3623338_3623492_3624047_3624232_3630204_3630347_3636051
transcript_80659.known	chr17	+	2657	12	FSM	ENSG00000040531.16	ENST00000673965.1	2657	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	17.9231601404855	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGAGCTTGTCAGTCC	3636283	True	NA	-73	True	NA	NA	NA	3636458	3661448	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_3636704_3637106_3637317_3640187_3640268_3647443_3647523_3648846_3648932_3654997_3655102_3655220_3655353_3656486_3656587_3656675_3656796_3658004_3658176_3659857_3659976_3660235
transcript_80660.known	chr17	+	4139	12	FSM	ENSG00000040531.16	ENST00000046640.9	4139	12	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	8.98575548592841	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGGCAAAGAGGAAAATGAC	3635637	True	NA	NA	False	ATTAAA	-22	NA	3636759	3663103	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_3636832_3637106_3637317_3640187_3640268_3647443_3647523_3648846_3648932_3654997_3655102_3655220_3655353_3656486_3656587_3656675_3656796_3658004_3658176_3659857_3659976_3660235
transcript_80665.known	chr17	-	1998	12	FSM	ENSG00000083454.22	ENST00000547178.5	1998	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	10.9333064569985	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTCCTGATTTTTTTCTC	-3696085	False	NA	0	True	AATAAA	-17	NA	3696096	3673226	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_3673878_3679589_3679785_3681895_3681979_3688011_3688106_3688625_3688760_3689491_3689628_3690069_3690151_3690426_3690524_3690604_3690681_3690955_3691028_3691643_3691795_3695868
transcript_80671.nic	chr17	+	2764	11	NIC	ENSG00000040531.16	novel	2657	12	NA	NA	0	0	intron_retention	FALSE	canonical	2	16	junction_4	14.1070904158157	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTAAAACCTACTCGCTT	3636283	True	NA	-9	True	NA	NA	NA	3636458	3661512	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_3636832_3637106_3637317_3640187_3640268_3647443_3647523_3654997_3655102_3655220_3655353_3656486_3656587_3656675_3656796_3658004_3658176_3659857_3659976_3660235
transcript_80676.known	chr17	-	2031	11	FSM	ENSG00000083454.22	ENST00000345901.7	2031	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_9	11.894956914592	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGTGTCAATTTCAAACG	-3696205	False	NA	-18	True	CATAAA	-7	NA	3696216	3673244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_3673878_3679589_3679785_3681895_3681979_3688011_3688106_3688625_3688760_3689491_3689631_3690069_3690151_3690426_3690524_3690604_3690681_3691643_3691795_3695868
transcript_80681.known	chr17	+	2417	10	FSM	ENSG00000040531.16	ENST00000673669.1	2417	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	21.1974841274462	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTAAAACCTACTCGCTT	3635603	True	NA	-9	True	NA	NA	NA	3636725	3661512	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_3636832_3637106_3637317_3647443_3647523_3654997_3655102_3655220_3655353_3656486_3656587_3656675_3656796_3658004_3658176_3659857_3659976_3660235
transcript_80686.nic	chr17	+	2524	9	NIC	ENSG00000040531.16	novel	2417	10	NA	NA	81	0	intron_retention	FALSE	canonical	2	4	junction_2	19.4771500738686	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTAAAACCTACTCGCTT	3636495	True	NA	-9	True	NA	NA	NA	3636539	3661512	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_3636832_3637106_3637317_3654997_3655102_3655220_3655353_3656486_3656587_3656675_3656796_3658004_3658176_3659857_3659976_3660235
transcript_80689.known	chr17	+	803	6	FSM	ENSG00000040531.16	ENST00000399306.7	803	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	19.8131269616888	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCATTGCTGAGAGGGGAT	3635706	False	NA	NA	False	AATAAA	-21	NA	3636828	3650519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_3636832_3637106_3637317_3640187_3640268_3647443_3647523_3648846_3648932_3650173
transcript_80692.nnic	chr17	-	1225	5	NNC	ENSG00000213977.8	novel	1280	4	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	211.304282966531	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGGGCTTTGCTGAGGCA	-3662700	True	NA	-6	True	AATAAA	-15	NA	3668618	3662894	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_3663563_3663657_3663886_3664194_3664273_3664678_3664799_3668487
transcript_80694.nnic	chr17	-	1357	5	NNC	ENSG00000213977.8	novel	1280	4	NA	NA	-47	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	211.304282966531	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGGGCTTTGCTGAGGCA	NA	False	NA	-6	True	AATAAA	-15	NA	3668726	3662894	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_3663567_3663637_3663886_3664194_3664273_3664678_3664799_3668487
transcript_80698.known	chr17	-	1280	4	FSM	ENSG00000213977.8	ENST00000225525.4	1280	4	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_1	35.9289422177844	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGGGCTTTGCTGAGGCA	-3662660	True	NA	-6	True	AATAAA	-15	NA	3668578	3662894	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_3663886_3664194_3664273_3664678_3664799_3668487
transcript_8070.known	chr1	+	1472	9	FSM	ENSG00000159214.13	ENST00000372318.8	1472	9	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_1	39.323776204734	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	43991466	True	NA	14	True	ATTAAA	-18	NA	43991598	43996528	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43991747_43991846_43992005_43992211_43992388_43992522_43992640_43993886_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_80701.known	chr17	-	1302	3	FSM	ENSG00000213977.8	ENST00000611779.4	1302	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	233	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGGGGCTTTGCTGAGGC	-3668669	False	NA	-7	True	AATAAA	-14	NA	3668679	3662895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_3663886_3664678_3664799_3668487
transcript_80705.known	chr17	+	656	2	FSM	ENSG00000127774.7	ENST00000248378.6	656	2	0	0	0	0	multi-exon	FALSE	canonical	3	1160	junction_1	0	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGGAGTTCTTTCCTG	3644827	True	NA	22	True	ATTAAA	-15	NA	3668811	3669665	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_3668900_3669097
transcript_80706.known	chr17	+	762	2	FSM	ENSG00000127774.7	ENST00000397133.2	762	2	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGAGTTCTTTCCTGCTG	3644837	True	NA	25	True	ATTAAA	-18	NA	3668821	3669668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_3669013_3669097
transcript_80708.known	chr17	-	721	5	FSM	ENSG00000083457.12	ENST00000570360.1	721	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	278.314907074702	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATTGTGCAAAAAGTAAAC	-3719108	True	NA	-75	True	NA	NA	NA	3723854	3714691	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_3714943_3716687_3716799_3720306_3720403_3723287_3723384_3723687
transcript_80709.known	chr17	-	672	4	FSM	ENSG00000083457.12	ENST00000572179.5	672	4	0	0	0	0	multi-exon	FALSE	canonical	3	562	junction_3	30.554141381416	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGCCTTTAATCTGGAA	-3719091	True	NA	-11	True	AATAAA	-19	NA	3723837	3714627	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_3714943_3716687_3716799_3720306_3720403_3723687
transcript_80711.nnic	chr17	+	3737	2	Genic_Genomic	ENSG00000177602.5	novel	2797	1	NA	NA	4	1216	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGAGTCCTCGTCAGCT	3720800	True	NA	7	True	GATAAA	-15	NA	3723906	3727915	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Genic_Genomic_chr17_+_3726573_3726844
transcript_80713.known	chr17	+	2797	1	FSM	ENSG00000177602.5	ENST00000325418.5	2797	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTTTATATTTATAAACCCT	3720796	True	NA	NA	False	AATAAA	-22	NA	3723902	3726699	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_3723900_3726700
transcript_80725.known	chr17	-	12772	13	FSM	ENSG00000074356.17	ENST00000389005.6	12772	13	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_6	32.025597400968	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGTTCTAGTGGCATT	-3838720	True	NA	-2	True	AATAAA	-20	NA	3846246	3802157	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_3813280_3814321_3814484_3816115_3816271_3818262_3818573_3821248_3821353_3821952_3822053_3824941_3825051_3825766_3825844_3826086_3826216_3829242_3829369_3840099_3840206_3843085_3843152_3846040
transcript_80737.nic	chr17	-	650	5	ISM	ENSG00000074356.17	ENST00000389005.6	12772	13	-18	23930	-18	-3584	5prime_fragment	FALSE	canonical	3	165	junction_3	21.0297408448131	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAACAACACAAAGGAGGG	-3838738	True	NA	15	True	NA	NA	NA	3846264	3826087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_3826216_3829242_3829369_3840099_3840206_3843085_3843152_3846040
transcript_80739.nic	chr17	-	1455	3	ISM	ENSG00000074356.17	ENST00000389005.6	12772	13	-81	36946	-81	-16600	5prime_fragment	FALSE	canonical	3	165	junction_1	17.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTGAGTCTATGTTCTT	-3846316	False	NA	-7	True	AATAAA	-19	NA	3846327	3839103	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_3840206_3843085_3843152_3846040
transcript_8074.nic	chr1	+	1392	8	NIC	ENSG00000159214.13	novel	1472	9	NA	NA	2	0	intron_retention	FALSE	canonical	3	20	junction_1	33.3870315774107	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	43991032	True	NA	14	True	ATTAAA	-18	NA	43991775	43996528	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_43992005_43992211_43992388_43992522_43992640_43993889_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_80747.known	chr17	-	3572	16	FSM	ENSG00000004660.15	ENST00000348335.7	3572	16	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_9	7.05848583070209	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGTGCGTACATTTTCT	-3892811	True	NA	NA	False	AATAAA	-33	NA	3893053	3860314	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_3862284_3865907_3866012_3869486_3869616_3869800_3869889_3872553_3872628_3873408_3873463_3876222_3876423_3880345_3880435_3881626_3881649_3882527_3882565_3883041_3883176_3883428_3883481_3883883_3883938_3884379_3884428_3885327_3885731_3892938
transcript_80748.known	chr17	-	2459	16	FSM	ENSG00000004660.15	ENST00000158166.5	2459	16	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	12.0867236623036	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGCCTGTGCTGGAGTTT	-3892802	True	NA	NA	False	AATAAA	-20	NA	3893044	3865156	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_3866012_3869486_3869616_3869800_3869889_3872553_3872628_3873408_3873463_3876222_3876423_3880345_3880435_3881626_3881649_3882256_3882371_3882527_3882565_3883041_3883176_3883428_3883481_3883883_3883938_3884379_3884428_3885327_3885731_3892938
transcript_80762.known	chr17	-	4826	22	FSM	ENSG00000074370.18	ENST00000309890.11	4826	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	53.4228415567723	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATCCTCAGCGTCTGTTT	-3963120	True	NA	-20	True	AATAAA	-23	NA	3964464	3923869	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_3925442_3928226_3928328_3928662_3928781_3929327_3929446_3930300_3930435_3935191_3935278_3936266_3936470_3937415_3937637_3940970_3941307_3941435_3941655_3942605_3942732_3943390_3943523_3944703_3944807_3945059_3945149_3947390_3947856_3950510_3950597_3950692_3950774_3951250_3951390_3951580_3951686_3953346_3953430_3953692_3953711_3964173
transcript_80763.known	chr17	-	5033	25	FSM	ENSG00000185722.18	ENST00000574367.5	5033	25	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_11	26.9825046197634	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTTGTTCATTCTTTT	-4258724	True	NA	NA	False	ACTAAA	-17	NA	4263956	4166273	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_4167912_4169197_4169289_4170714_4170862_4172555_4172681_4173353_4173445_4173908_4174057_4177125_4177303_4178856_4179058_4179720_4179878_4181253_4181373_4182180_4182353_4183397_4183552_4183811_4183911_4184817_4185047_4189381_4189480_4194977_4195178_4195402_4195472_4197372_4197578_4206320_4206487_4207932_4208083_4209823_4209948_4216982_4217119_4235771_4235891_4242255_4242449_4263931
transcript_80769.known	chr17	+	694	4	FSM	ENSG00000167740.10	ENST00000577075.6	694	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	28.9635786616379	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGCCTCTTCTGTTAATAA	NA	False	NA	NA	False	NA	NA	NA	4143167	4157085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4143314_4149890_4150032_4154673_4154861_4156865
transcript_80773.known	chr17	+	1969	4	FSM	ENSG00000167740.10	ENST00000301391.8	1969	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	13.1233464566864	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGCTGGGCTTGCTGCTT	4142741	True	NA	9	True	ATTAAA	-25	NA	4143196	4157697	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4144006_4149890_4150032_4154673_4154861_4156865
transcript_80775.known	chr17	+	1588	4	FSM	ENSG00000167740.10	ENST00000575251.5	1588	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	30.7354301526214	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAATCAGGTGTGGTGTG	4142755	True	NA	42	True	TTTAAA	-29	NA	4143210	4157572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4143764_4149890_4150032_4154673_4154861_4156865
transcript_80779.known	chr17	-	1514	7	FSM	ENSG00000132388.13	ENST00000572484.5	1514	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_5	586.028914720843	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGCCAGAATGTTCTCA	-4348247	True	NA	NA	False	NA	NA	NA	4366628	4271979	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_4272517_4282797_4282922_4289229_4289409_4296716_4296815_4307020_4307124_4331773_4331889_4366270
transcript_80788.known	chr17	-	4167	6	FSM	ENSG00000132388.13	ENST00000396981.7	4167	6	0	0	0	0	multi-exon	FALSE	canonical	3	1153	junction_3	71.6184333813579	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGAGCTATTTTGGTTTT	-4348294	True	NA	-20	True	AATAAA	-20	NA	4366675	4269258	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_4272517_4282797_4282922_4289229_4289409_4296716_4296815_4307020_4307124_4366270
transcript_808.known	chr1	-	1598	12	FSM	ENSG00000221978.13	ENST00000488340.5	1598	12	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_6	282.157303293133	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCGGGGTTGCAGTGACTG	-1399318	False	14990	NA	False	NA	NA	NA	1399328	1387231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1387583_1387776_1387870_1387953_1388066_1390229_1390372_1390458_1390564_1390765_1390866_1392789_1392804_1393395_1393461_1395393_1395515_1398232_1398343_1398596_1398672_1399018
transcript_80804.known	chr17	-	984	5	FSM	ENSG00000132388.13	ENST00000571980.1	984	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	549.190028587556	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACATAGCACAACATGATC	-4348247	True	NA	NA	False	AATGAA	-35	NA	4366628	4272296	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_4272517_4282797_4282922_4289229_4289409_4307020_4307124_4366270
transcript_80818.known	chr17	-	863	4	FSM	ENSG00000132388.13	ENST00000574633.5	863	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	619.759272262671	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTACCAAATAATGCTTT	-4348244	True	NA	NA	False	AATATA	-31	NA	4366625	4272235	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_4272517_4282797_4282922_4307020_4307124_4366270
transcript_80822.known	chr17	-	4104	27	FSM	ENSG00000132382.15	ENST00000381556.6	4104	27	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_1	147.577158637369	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGGTTCTTGTACAACAA	-4537462	True	NA	0	True	AATAAA	-43	NA	4555386	4538896	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_4538976_4539438_4539968_4540347_4540485_4541462_4541565_4541783_4541892_4542463_4542533_4542615_4542742_4542912_4543166_4544488_4544647_4544750_4544922_4545025_4545176_4545258_4545346_4545609_4545762_4545845_4545943_4547957_4548058_4548142_4548311_4548523_4548650_4549331_4549443_4550057_4550354_4551879_4551998_4552124_4552293_4552450_4552627_4553809_4553918_4554018_4554094_4554194_4554279_4554860_4554957_4555126
transcript_8083.nnic	chr1	+	1219	7	NIC	ENSG00000159214.13	novel	1472	9	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	38.907654202683	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	43991029	True	NA	14	True	ATTAAA	-18	NA	43991772	43996528	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_43992005_43992522_43992640_43993889_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_80838.known	chr17	-	4558	26	FSM	ENSG00000132382.15	ENST00000254718.9	4558	26	0	0	0	0	multi-exon	FALSE	canonical	3	633	junction_19	58.6923368081387	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCGGACCTGGTTCTTGT	-4537460	True	NA	-7	True	AATAAA	-36	NA	4555384	4538903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_4539968_4540347_4540485_4541462_4541565_4541783_4541892_4542463_4542533_4542615_4542742_4542912_4543166_4544488_4544647_4544750_4544922_4545025_4545176_4545258_4545346_4545609_4545762_4545845_4545943_4547957_4548058_4548142_4548311_4548523_4548650_4549331_4549443_4550057_4550354_4551879_4551998_4552124_4552293_4552450_4552627_4553809_4553918_4554018_4554094_4554194_4554279_4554860_4554957_4555126
transcript_8087.known	chr1	+	728	6	FSM	ENSG00000159214.13	ENST00000490064.5	728	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	37.8914238317855	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAAGGGCTGGTCACCGA	43991030	True	NA	NA	False	NA	NA	NA	43991773	43996155	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_43992005_43993889_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_80880.nic	chr17	-	2981	13	ISM	ENSG00000132382.15	ENST00000254718.9	4558	26	-52	8009	-50	772	5prime_fragment	FALSE	canonical	3	633	junction_6	57.298923782796	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGCAGCCCAGAGGAGGAC	NA	False	NA	NA	False	NA	NA	NA	4555436	4546912	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_4548058_4548142_4548311_4548523_4548650_4549331_4549443_4550057_4550354_4551879_4551998_4552124_4552293_4552450_4552627_4553809_4553918_4554018_4554094_4554194_4554279_4554860_4554957_4555126
transcript_80883.nic	chr17	-	2781	13	ISM	ENSG00000132382.15	ENST00000254718.9	4558	26	-18	8175	-16	606	5prime_fragment	FALSE	canonical	3	633	junction_6	57.298923782796	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCAGGTGTGGTGGCAG	-4537478	True	NA	NA	False	AATACA	-5	NA	4555402	4547078	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_4548058_4548142_4548311_4548523_4548650_4549331_4549443_4550057_4550354_4551879_4551998_4552124_4552293_4552450_4552627_4553809_4553918_4554018_4554094_4554194_4554279_4554860_4554957_4555126
transcript_8091.nnic	chr1	+	1469	6	NIC	ENSG00000159214.13	novel	1659	8	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	36.7238342224774	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	43991045	True	NA	14	True	ATTAAA	-18	NA	43991788	43996528	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_43992388_43993889_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_80910.known	chr17	+	1919	8	FSM	ENSG00000188176.12	ENST00000338859.8	1919	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	8.06858356939596	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGGTTTGTCATTTCTG	4583975	True	NA	9	True	CATAAA	-20	NA	4583998	4608319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4584099_4592360_4592449_4592928_4593172_4593821_4593898_4595144_4595328_4596859_4596978_4597171_4597324_4607360
transcript_80911.known	chr17	+	2295	8	FSM	ENSG00000188176.12	ENST00000389313.9	2295	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	5.84144237150311	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGGTTTGTCATTTCTG	4584282	True	NA	9	True	CATAAA	-20	NA	4584528	4608319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4585005_4592360_4592449_4592928_4593172_4593821_4593898_4595144_4595328_4596859_4596978_4597171_4597324_4607360
transcript_80912.nic	chr17	+	2361	7	NIC	ENSG00000188176.12	novel	2295	8	NA	NA	221	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_2	8.23947139620552	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGGTTTGTCATTTCTG	4584196	False	NA	9	True	CATAAA	-20	NA	4584219	4608319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_4585005_4592360_4592449_4593821_4593898_4595144_4595328_4596859_4596978_4597171_4597324_4607360
transcript_80914.known	chr17	-	2697	14	FSM	ENSG00000161905.13	ENST00000293761.8	2697	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	1.26864788480543	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAGAGCATCAAAAAATTT	-4641652	True	NA	NA	False	AATAAA	-16	NA	4641678	4630918	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_4631780_4631888_4632057_4632180_4632282_4632860_4632983_4633145_4633316_4633413_4633501_4635758_4635969_4637114_4637259_4638216_4638378_4638580_4638685_4638849_4638973_4639050_4639133_4639429_4639632_4641516
transcript_8092.nnic	chr1	+	1530	6	NIC	ENSG00000159214.13	novel	1659	8	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	35.9466271018576	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	43991070	True	NA	14	True	ATTAAA	-18	NA	43991813	43996528	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_43992388_43993803_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_80923.known	chr17	-	3673	17	FSM	ENSG00000141456.16	ENST00000301396.8	3673	17	0	0	0	0	multi-exon	FALSE	canonical	3	725	junction_9	59.3806576251897	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGCTTCTGCCTTTTG	-4704314	False	NA	-2	True	AATAAA	-20	NA	4704337	4671384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_4671532_4671690_4673146_4673249_4673457_4673618_4673675_4674509_4674670_4674808_4674957_4675078_4675196_4675273_4675363_4675796_4675885_4676035_4676163_4676356_4676508_4676752_4676813_4682501_4682574_4682802_4682953_4690887_4690994_4691377_4691443_4703862
transcript_80938.known	chr17	-	3465	17	FSM	ENSG00000141456.16	ENST00000574876.5	3465	17	0	0	0	0	multi-exon	FALSE	canonical	3	725	junction_9	59.3806576251897	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGCTTCTGCCTTTTG	-4694213	True	NA	-2	True	AATAAA	-20	NA	4704129	4671384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_4671532_4671690_4673146_4673249_4673457_4673618_4673675_4674509_4674670_4674808_4674957_4675078_4675196_4675273_4675363_4675796_4675885_4676035_4676163_4676356_4676508_4676752_4676813_4682501_4682574_4682802_4682953_4690887_4690994_4691377_4691443_4703862
transcript_80990.nic	chr17	+	2048	15	NIC	ENSG00000141480.18	novel	1778	15	NA	NA	-198	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_13	119.133093125089	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGTGTGTTTTCTCTGT	4710136	False	NA	19	True	AATAAA	-15	NA	4710397	4721497	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_4710745_4715012_4715044_4715972_4716034_4716146_4716192_4716411_4716609_4717216_4717277_4717684_4717753_4717887_4718024_4718260_4718346_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720549_4720641_4720945
transcript_80991.known	chr17	+	1778	15	FSM	ENSG00000141480.18	ENST00000269260.7	1778	15	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_1	62.8347362661184	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGTGTGTTTTCTCTGT	4710486	False	NA	19	True	AATAAA	-15	NA	4710631	4721497	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4710745_4715012_4715044_4715972_4716034_4716146_4716192_4716411_4716609_4717216_4717277_4717684_4717753_4717887_4718024_4718260_4718346_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720585_4720641_4720945
transcript_81000.known	chr17	+	1236	14	FSM	ENSG00000141480.18	ENST00000381488.10	1236	14	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_3	117.400694533393	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGATGGGGTTGGGAGAGG	4708606	True	NA	NA	False	NA	NA	NA	4710692	4721061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4710745_4715012_4715044_4715972_4716034_4716411_4716609_4717216_4717277_4717684_4717753_4717887_4718024_4718260_4718346_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720585_4720641_4720945
transcript_81002.nic	chr17	+	2001	14	NIC	ENSG00000141480.18	novel	1778	15	NA	NA	-182	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_12	130.185348069862	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGTGTGTTTTCTCTGT	4710152	False	NA	19	True	AATAAA	-15	NA	4710413	4721497	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_4710745_4715972_4716034_4716146_4716192_4716411_4716609_4717216_4717277_4717684_4717753_4717887_4718024_4718260_4718346_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720549_4720641_4720945
transcript_81003.known	chr17	+	1348	14	FSM	ENSG00000141480.18	ENST00000574954.5	1348	14	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	76.5409740600364	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCCCACTGTCAATGGGG	4710484	False	NA	NA	False	NA	NA	NA	4710629	4721096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4710745_4715972_4716034_4716146_4716192_4716411_4716609_4717216_4717277_4717684_4717753_4717887_4718024_4718260_4718346_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720585_4720641_4720945
transcript_81017.nic	chr17	+	1880	13	NIC	ENSG00000141480.18	novel	1778	15	NA	NA	-182	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_7	128.100519341475	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGTGTGTTTTCTCTGT	4710152	False	NA	19	True	AATAAA	-15	NA	4710413	4721497	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_4710745_4715972_4716034_4716146_4716192_4716411_4716609_4717216_4717277_4717684_4717753_4717887_4718024_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720585_4720641_4720945
transcript_81020.known	chr17	+	1660	13	FSM	ENSG00000141480.18	ENST00000572457.5	1660	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	119.959339176054	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTTTACTAAGCATGAGT	4710497	False	NA	4	True	CATAAA	-12	NA	4710642	4721482	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4710745_4716146_4716192_4716411_4716609_4717216_4717277_4717684_4717753_4717887_4718024_4718260_4718346_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720585_4720641_4720945
transcript_81033.known	chr17	-	2324	6	FSM	ENSG00000161921.17	ENST00000293778.12	2324	6	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_4	6.24819974072532	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGAAGTATGTATTTTCA	-4739699	True	NA	NA	False	ATTAAA	-29	NA	4739928	4733532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_4734480_4734582_4734653_4735091_4735509_4738407_4738491_4738781_4738921_4739260
transcript_81034.known	chr17	+	652	3	FSM	ENSG00000161920.11	ENST00000575284.5	652	3	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_2	105.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGGCAAATGGTGGGCAT	4730125	True	NA	NA	False	NA	NA	NA	4731427	4733312	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4731575_4731775_4731907_4732938
transcript_81035.known	chr17	+	836	3	FSM	ENSG00000161920.11	ENST00000293777.6	836	3	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_2	17	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGATCAGACTCTCACTGG	4730125	True	NA	NA	False	AATAAA	-33	NA	4731427	4733607	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4731575_4731775_4731907_4733049
transcript_81036.known	chr17	+	802	2	FSM	ENSG00000161920.11	ENST00000573708.1	802	2	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCTTGGTGGTGAGTA	4730128	True	NA	NA	False	NA	NA	NA	4731430	4732433	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4731575_4731775
transcript_81040.known	chr17	-	698	3	FSM	ENSG00000182853.12	ENST00000328739.6	698	3	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTCTCGCCTGTTTAT	-4786258	False	18	1	True	ATTAAA	-16	NA	4786364	4785284	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_4785660_4785936_4786053_4786157
transcript_81043.known	chr17	+	871	6	FSM	ENSG00000142507.10	ENST00000614486.4	871	6	0	0	0	0	multi-exon	FALSE	canonical	1	38	junction_5	3029.86382532285	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGGGGTTCTTTTTTTT	4742573	True	NA	36	True	AATAAA	-23	NA	4796143	4798502	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4796297_4796727_4796796_4797437_4797570_4797681_4797812_4798008_4798154_4798259
transcript_81044.known	chr17	+	824	6	FSM	ENSG00000142507.10	ENST00000270586.8	824	6	0	0	0	0	multi-exon	FALSE	canonical	3	7142	junction_3	502.900944520887	2696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTACTTTGGGGTTCT	4742593	True	NA	29	True	AATAAA	-16	NA	4796163	4798495	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4796297_4796727_4796796_4797437_4797570_4797681_4797812_4798008_4798154_4798279
transcript_81055.known	chr17	+	583	2	FSM	ENSG00000142507.10	ENST00000575079.1	583	2	0	0	0	0	multi-exon	FALSE	canonical	3	7283	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGCGGTGCGTGCCTGCA	4742590	True	NA	NA	False	AATACA	-14	NA	4796160	4797174	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4796297_4796727
transcript_81062.known	chr17	+	3391	25	FSM	ENSG00000129219.14	ENST00000572940.5	3391	25	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_23	22.417402404283	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTCATGCGTCTTCCTTGG	4804623	True	NA	11	True	AATAAA	-12	NA	4807168	4823428	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4807226_4807771_4807882_4807983_4808115_4808273_4808417_4809099_4809206_4809297_4809364_4809492_4809552_4809690_4809784_4809876_4810030_4810801_4810952_4814417_4814502_4814632_4814712_4815475_4815587_4815763_4815935_4816619_4816747_4816936_4817056_4817145_4817260_4818001_4818107_4818296_4818386_4818493_4818608_4818773_4818824_4819083_4819219_4819428_4819550_4821792_4821908_4822639
transcript_81063.known	chr17	+	3443	25	FSM	ENSG00000129219.14	ENST00000263088.11	3443	25	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_23	14.0608178006196	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGCGTCTTCCTTGGAG	4804606	True	NA	13	True	AATAAA	-14	NA	4807151	4823430	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4807226_4807771_4807882_4807983_4808115_4808273_4808417_4809099_4809206_4809297_4809364_4809492_4809552_4809690_4809784_4809876_4810030_4810801_4810952_4814417_4814502_4814632_4814712_4815475_4815587_4815763_4815935_4816619_4816747_4816936_4817056_4817145_4817260_4818001_4818107_4818296_4818386_4818493_4818608_4818773_4818824_4819083_4819219_4819428_4819583_4821792_4821908_4822639
transcript_8108.known	chr1	+	482	2	FSM	ENSG00000230615.8	ENST00000623351.1	482	2	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTAATCCCAGCTACTC	44030203	True	NA	NA	False	AATACA	-26	NA	44030442	44040273	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_44030558_44039906
transcript_81080.nnic	chr17	+	3330	24	NIC	ENSG00000129219.14	novel	3443	25	NA	NA	-20	0	intron_retention	FALSE	canonical	3	7	junction_2	28.8318244667138	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTCATGCGTCTTCCTTGG	4804586	True	NA	11	True	AATAAA	-12	NA	4807131	4823428	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_4807226_4807771_4807882_4808273_4808417_4809099_4809206_4809297_4809364_4809492_4809552_4809690_4809784_4809876_4810030_4810801_4810952_4814417_4814502_4814632_4814712_4815475_4815587_4815763_4815935_4816619_4816747_4816936_4817056_4817145_4817260_4818001_4818107_4818296_4818386_4818493_4818608_4818773_4818824_4819083_4819219_4819428_4819583_4821792_4821908_4822639
transcript_8109.nic	chr1	+	1683	12	NIC	ENSG00000178028.14	novel	1552	11	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	120.023551407888	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGCTGCTTCCTTTTCCT	44208729	True	NA	17	True	AATAGA	-15	NA	44213426	44220673	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_44213528_44213708_44213859_44214349_44214442_44214538_44214617_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
transcript_81096.known	chr17	+	5017	32	FSM	ENSG00000141503.17	ENST00000355280.11	5017	32	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_21	43.2112156404792	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGGCCGCATGTCCTTGC	4824707	True	NA	27	True	AATAAA	-24	NA	4833339	4898061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4833641_4878316_4878383_4880983_4881041_4881131_4881258_4884362_4884474_4884911_4885003_4885482_4885614_4885910_4885966_4886119_4886199_4886450_4886627_4887109_4887180_4887579_4887791_4889646_4889764_4890516_4890736_4890950_4891125_4891455_4891717_4892148_4892235_4892401_4892513_4892655_4892769_4892978_4893068_4893433_4893598_4893987_4894094_4894173_4894312_4894524_4894634_4895074_4895243_4895349_4895494_4895697_4895833_4896002_4896104_4896192_4896343_4896428_4896589_4896673_4896814_4897203
transcript_81098.known	chr17	+	4863	32	FSM	ENSG00000141503.17	ENST00000347992.11	4863	32	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	83.8952570287801	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACCATGCAGGCCGCATG	4824767	True	NA	20	True	AATAAA	-17	NA	4833399	4898054	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4833641_4878316_4878383_4880983_4881041_4881131_4881258_4884362_4884474_4884911_4885003_4885482_4885614_4885910_4885966_4886119_4886199_4886450_4886627_4887109_4887180_4887579_4887791_4889646_4889764_4890516_4890736_4890950_4891125_4891455_4891717_4892148_4892235_4892655_4892769_4892978_4893068_4893285_4893310_4893433_4893598_4893987_4894094_4894173_4894312_4894524_4894634_4895074_4895243_4895349_4895494_4895697_4895833_4896002_4896104_4896192_4896343_4896428_4896589_4896673_4896814_4897203
transcript_81099.known	chr17	+	3939	32	FSM	ENSG00000141503.17	ENST00000453408.7	3939	32	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_15	56.106372882621	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGGGCCCTGGGCTGGGGCT	4824951	False	NA	NA	False	NA	NA	NA	4833583	4897287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4833641_4878316_4878383_4880983_4881041_4881131_4881258_4884362_4884474_4884911_4885003_4885482_4885614_4885910_4885966_4886119_4886199_4886450_4886627_4887109_4887180_4887579_4887791_4889646_4889764_4890516_4890736_4890950_4891125_4891515_4891717_4892148_4892235_4892401_4892513_4892655_4892769_4892978_4893068_4893433_4893598_4893987_4894094_4894173_4894312_4894524_4894634_4895074_4895243_4895349_4895494_4895697_4895833_4896002_4896104_4896192_4896343_4896428_4896589_4896673_4896814_4897203
transcript_81116.known	chr17	+	3201	3	FSM	ENSG00000205710.4	ENST00000381365.4	3201	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	7	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGTCTCTGTCTTTGTC	4899214	True	NA	24	True	NA	NA	NA	4899535	4902934	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4899829_4899935_4900146_4900236
transcript_81117.known	chr17	+	1275	2	FSM	ENSG00000205710.4	ENST00000521575.1	1275	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCGGCACGCTCAGAGAA	4899405	False	NA	NA	False	GGGGCT	-18	NA	4899417	4900799	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4899829_4899935
transcript_81118.nic	chr17	-	1543	2	ISM	ENSG00000108556.10	ENST00000649830.1	2293	11	35043	-322	834	8	3prime_fragment	FALSE	canonical	3	6	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCCCTGCCCCTGGAGTG	-4899320	True	NA	NA	False	ATTAAA	-23	NA	4899395	4897762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_4899108_4899197
transcript_81120.nic	chr17	+	1921	11	NIC	ENSG00000108523.16	novel	1728	11	NA	NA	-32	0	combination_of_known_junctions	TRUE	canonical	3	85	junction_2	245.288014383092	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGGGTAAGATCATTCTC	NA	False	NA	20	True	AATAAA	-21	NA	4939975	4945222	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_4940361_4940486_4940727_4940872_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
transcript_81123.known	chr17	+	1511	11	FSM	ENSG00000108523.16	ENST00000572430.5	1511	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	269.367796887453	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACTGGGTCTTCACTTCT	4935108	True	NA	-32	True	GGGGCT	-26	NA	4940119	4945170	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4940231_4940486_4940643_4940872_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
transcript_81125.known	chr17	+	1728	11	FSM	ENSG00000108523.16	ENST00000571816.5	1728	11	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_2	250.294146955138	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCTAATAAAATTGTTTCT	4939879	False	NA	-11	True	NA	NA	NA	4940007	4945191	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4940231_4940486_4940727_4940872_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
transcript_81130.known	chr17	+	1775	10	FSM	ENSG00000108523.16	ENST00000262482.11	1775	10	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	172.677033865802	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGGGTAAGATCATTCTC	4940084	False	NA	20	True	AATAAA	-21	NA	4940267	4945222	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4940361_4940486_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
transcript_81131.nic	chr17	+	1923	10	NIC	ENSG00000108523.16	novel	1728	11	NA	NA	-18	0	intron_retention	FALSE	canonical	3	189	junction_1	181.562967344971	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGGGTAAGATCATTCTC	4939861	True	NA	20	True	AATAAA	-21	NA	4939989	4945222	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_4940231_4940486_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
transcript_81148.known	chr17	-	1692	8	FSM	ENSG00000108528.14	ENST00000225665.12	1692	8	0	0	0	0	multi-exon	FALSE	canonical	3	1123	junction_5	85.9724683030704	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCAGGCCCGGTGTGTTTC	-4940032	False	121548	3	True	TATAAA	-43	NA	4940046	4937129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_4937897_4938022_4938075_4938153_4938254_4938338_4938430_4938511_4938603_4938768_4938976_4939059_4939213_4939815
transcript_81150.known	chr17	-	952	7	FSM	ENSG00000108528.14	ENST00000544061.6	952	7	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_6	446.065920639041	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGCCTGCTGCGCCTATA	-4940039	False	121548	NA	False	GGGGCT	-4	NA	4940053	4937723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_4937897_4938022_4938075_4938153_4938254_4938338_4938430_4938511_4938603_4938768_4938976_4939815
transcript_81156.known	chr17	-	2176	6	FSM	ENSG00000108528.14	ENST00000574710.1	2176	6	0	0	0	0	multi-exon	FALSE	canonical	3	1123	junction_5	93.9267799937803	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCAGCCCCAAATCTGGAG	-4940016	False	121548	-10	True	AATAAA	-13	NA	4940030	4937316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_4937897_4938022_4938075_4938153_4938254_4938338_4938430_4938511_4938603_4938768
transcript_81157.known	chr17	+	1436	10	FSM	ENSG00000108523.16	ENST00000576229.5	1436	10	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	217.913733072811	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGGTCTTCACTTCTTG	4940253	False	NA	-30	True	GGGGCT	-28	NA	4940486	4945172	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4940727_4940922_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
transcript_81158.known	chr17	+	1757	9	FSM	ENSG00000108523.16	ENST00000575111.5	1757	9	0	0	0	0	multi-exon	FALSE	canonical	3	685	junction_5	41.7342784770505	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCTAATAAAATTGTTTCT	4940147	False	NA	-11	True	NA	NA	NA	4940380	4945191	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
transcript_8116.known	chr1	+	1552	11	FSM	ENSG00000178028.14	ENST00000315913.9	1552	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	104.697468928337	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTTTCCTTTCCTTCA	44208790	True	NA	25	True	AATAGA	-23	NA	44213487	44220681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_44213528_44213708_44213859_44214349_44214442_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
transcript_81161.known	chr17	+	1453	12	FSM	ENSG00000108515.18	ENST00000519602.6	1453	12	0	0	0	0	multi-exon	FALSE	canonical	2	59	junction_1	30.4937332675919	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGCTGTGTGCTTCTTTG	4950319	True	NA	9	True	AATAAA	-17	NA	4951118	4957129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4951183_4951827_4951915_4952794_4952891_4953050_4953110_4953271_4953342_4953711_4953846_4955074_4955298_4955406_4955605_4955941_4956144_4956572_4956682_4956830_4956890_4956977
transcript_81163.known	chr17	+	1521	12	FSM	ENSG00000108515.18	ENST00000323997.10	1521	12	0	0	0	0	multi-exon	FALSE	canonical	2	37	junction_1	34.5734336456417	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTGTGTGCTTCTTTGTG	4951024	False	NA	11	True	AATAAA	-19	NA	4951094	4957131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4951225_4951827_4951915_4952794_4952891_4953050_4953110_4953271_4953342_4953711_4953846_4955074_4955298_4955406_4955605_4955941_4956144_4956572_4956682_4956830_4956890_4956977
transcript_8118.nic	chr1	+	1650	11	NIC	ENSG00000178028.14	novel	1552	11	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	120.960696095881	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGCTGCTTCCTTTTCCT	44208730	True	NA	17	True	AATAGA	-15	NA	44213427	44220673	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_44213528_44213662_44213859_44214349_44214442_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
transcript_8119.nnic	chr1	+	1601	11	NNC	ENSG00000178028.14	novel	1552	11	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	118.528308854889	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGCTGCTTCCTTTTCCT	44208755	True	NA	17	True	AATAGA	-15	NA	44213452	44220673	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_44213550_44213708_44213859_44214349_44214442_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
transcript_81190.known	chr17	-	807	3	FSM	ENSG00000108518.8	ENST00000225655.6	807	3	0	0	0	0	multi-exon	FALSE	canonical	3	30661	junction_2	679	21325	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTGTGTGATTTGAGCT	-4826982	True	NA	-44	True	AATAAA	-18	NA	4948530	4945651	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_4945998_4946627_4946821_4948262
transcript_81191.known	chr17	-	1668	7	FSM	ENSG00000091640.8	ENST00000573366.5	1668	7	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_6	366.258295317511	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTACATTCAATAAATACTG	-4967179	False	NA	-31	True	GGGGCT	-8	NA	4967191	4959255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_4959644_4959759_4959917_4960021_4960112_4960233_4960319_4960458_4960548_4960785_4960854_4966400
transcript_81194.known	chr17	-	1005	7	FSM	ENSG00000091640.8	ENST00000206020.8	1005	7	0	0	0	0	multi-exon	FALSE	canonical	3	898	junction_3	77.3809120879016	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGGTTTGTTTATACA	-4954802	True	NA	-1	True	AATAAA	-16	NA	4967817	4959225	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_4959644_4959759_4959917_4960021_4960112_4960233_4960319_4960458_4960548_4960785_4960854_4967719
transcript_81198.known	chr17	-	1094	6	FSM	ENSG00000091640.8	ENST00000575142.5	1094	6	0	0	0	0	multi-exon	FALSE	canonical	3	898	junction_2	81.958526097045	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGGTTTGTTTATACA	-4967778	False	NA	-1	True	AATAAA	-16	NA	4967790	4959225	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_4959917_4960021_4960112_4960233_4960319_4960458_4960548_4960785_4960854_4967719
transcript_81202.known	chr17	-	579	2	FSM	ENSG00000091640.8	ENST00000571023.1	579	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTAGCTGGGCTTGGT	-4954793	True	NA	NA	False	AATAAA	-34	NA	4967808	4965829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_4966320_4967719
transcript_81207.nic	chr17	+	4267	24	NIC	ENSG00000129250.12	novel	7917	23	NA	NA	-16	2436	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	94.99089599199	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTTGTGGCCTGTTTGTT	4993656	True	NA	26	True	AATAAA	-15	NA	4997933	5024701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_4998157_4999012_4999047_4999849_4999971_5000219_5000353_5000771_5000849_5001221_5001402_5002058_5002125_5002463_5002643_5002730_5002843_5003611_5003690_5003850_5003917_5003997_5004074_5004566_5004646_5004854_5005001_5006914_5007085_5007262_5007343_5007466_5007543_5013652_5013733_5014742_5014838_5019995_5020080_5020491_5020679_5020805_5020879_5022091_5022710_5023467
transcript_8121.known	chr1	+	1545	11	FSM	ENSG00000178028.14	ENST00000361745.10	1545	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	117.432363511938	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTTTCCTTTCCTTCA	44208757	True	NA	25	True	AATAGA	-23	NA	44213454	44220681	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_44213528_44213748_44213859_44214349_44214442_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
transcript_81210.known	chr17	+	7917	23	FSM	ENSG00000129250.12	ENST00000320785.10	7917	23	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_1	41.5348106516422	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCTCCACCAGTCTTA	4993672	True	NA	NA	False	AATAAA	-18	NA	4997949	5028401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_4998157_4999849_4999971_5000219_5000353_5000771_5000849_5001221_5001402_5002058_5002125_5002463_5002643_5002730_5002843_5003611_5003690_5003850_5003917_5003997_5004074_5004566_5004646_5004854_5005001_5006914_5007085_5007262_5007343_5007466_5007543_5013652_5013733_5014742_5014838_5019995_5020080_5020491_5020679_5020805_5020879_5022091_5022710_5023467
transcript_81224.nic	chr17	+	2370	21	ISM	ENSG00000129250.12	ENST00000320785.10	7917	23	-42	7560	-42	-1424	5prime_fragment	TRUE	canonical	3	257	junction_1	35.4895759343501	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGAAGCCGATCTTCTGC	4993630	True	NA	NA	False	AAGAAA	-2	NA	4997907	5020841	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_4998157_4999849_4999971_5000219_5000353_5000771_5000849_5001221_5001402_5002058_5002125_5002463_5002643_5002730_5002843_5003611_5003690_5003850_5003917_5003997_5004074_5004566_5004646_5004854_5005001_5006914_5007085_5007262_5007343_5007466_5007543_5013652_5013733_5014742_5014838_5019995_5020080_5020491_5020679_5020805
transcript_81241.known	chr17	-	2375	5	FSM	ENSG00000132517.15	ENST00000254853.10	2375	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.82915619758885	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATCTAGTGTGCAATTA	-5035404	True	NA	NA	False	ATTAAA	-17	NA	5035426	5032601	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_5033170_5033260_5033385_5033478_5034359_5034476_5034714_5034860
transcript_81243.known	chr17	+	4987	2	FSM	ENSG00000180787.6	ENST00000318833.4	4987	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATGCCTTTGTCATGTT	5078279	True	NA	NA	False	AATAAA	-24	NA	5078466	5096374	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_5078576_5091496
transcript_81246.known	chr17	-	2179	5	FSM	ENSG00000167840.13	ENST00000250076.7	2179	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	52.083466666496	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGCTTTGGATGCAAGTA	-5122894	True	NA	-23	True	NA	NA	NA	5123102	5105634	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_5106534_5108925_5109053_5109393_5109869_5111799_5112352_5122976
transcript_81247.known	chr17	-	2384	5	FSM	ENSG00000167840.13	ENST00000570486.5	2384	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	51.0245039172357	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAGAAACCTTTTATATG	-5122908	True	NA	NA	False	NA	NA	NA	5123116	5105928	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_5106534_5108925_5109869_5111075_5111220_5111799_5112352_5122976
transcript_8125.nic	chr1	+	1659	11	NIC	ENSG00000178028.14	novel	1742	10	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	121.532876210513	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGCTGCTTCCTTTTCCT	44208770	True	NA	17	True	AATAGA	-15	NA	44213467	44220673	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_44213663_44213748_44213859_44214349_44214442_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
transcript_81252.known	chr17	+	452	3	FSM	ENSG00000234327.9	ENST00000665679.2	469	3	16	1	-15	-1	multi-exon	FALSE	canonical	3	93	junction_1	133.5	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTTGAACATTCATTGCA	5109998	True	NA	9	True	AATAAA	-20	NA	5111941	5114382	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_5112102_5113385_5113453_5114157
transcript_81254.known	chr17	-	1553	5	FSM	ENSG00000167840.13	ENST00000573015.5	1553	5	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_4	21.821720830402	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGGACTGGATCCCATAAA	-5109022	True	NA	-44	True	NA	NA	NA	5111845	5105772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_5106534_5108925_5109053_5109393_5109869_5111075_5111220_5111799
transcript_81255.known	chr17	+	5909	18	FSM	ENSG00000029725.17	ENST00000537505.6	5909	18	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_6	58.5049608992861	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTAATGTTGAAACATCT	5277597	True	NA	18	True	AATAAA	-30	NA	5282283	5386340	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_5282521_5308693_5308823_5331948_5332153_5335183_5335345_5338018_5338139_5346789_5346926_5350450_5350630_5354358_5354491_5361207_5361676_5362911_5363017_5365121_5365239_5368369_5368469_5373313_5373455_5377115_5377306_5378176_5378233_5380363_5380463_5381388_5381506_5383121
transcript_81257.known	chr17	+	2490	17	FSM	ENSG00000029725.17	ENST00000341923.10	2490	17	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_15	74.9915620253372	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCTCATGGCAGGATTCT	5277800	False	NA	NA	False	ACTAAA	-34	NA	5282486	5383223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_5282521_5308693_5308823_5331948_5332153_5335183_5335345_5338018_5338139_5346789_5346926_5350450_5350630_5354358_5354491_5361207_5361676_5362911_5363017_5365121_5365239_5368369_5368469_5373313_5373455_5377115_5377306_5378176_5378233_5381388_5381506_5383121
transcript_8126.nnic	chr1	+	1616	11	NNC	ENSG00000178028.14	novel	1742	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	121.532876210513	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGCTGCTTCCTTTTCCT	44208773	True	NA	17	True	AATAGA	-15	NA	44213470	44220673	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_44213583_44213708_44213859_44214349_44214442_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
transcript_81263.nic	chr17	+	2484	15	ISM	ENSG00000029725.17	ENST00000341923.10	2490	17	-228	5006	-6	-476	5prime_fragment	FALSE	canonical	3	136	junction_6	62.2780139407814	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGGAAAAAGGACAGGTAAG	5277572	True	NA	NA	False	AATAAA	-2	NA	5282258	5378217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_5282521_5308693_5308823_5331948_5332153_5335183_5335345_5338018_5338139_5346789_5346926_5350450_5350630_5354358_5354491_5361207_5361676_5362911_5363017_5365121_5365239_5368369_5368469_5373313_5373455_5377115_5377306_5378176
transcript_81268.nic	chr17	+	958	5	NIC	ENSG00000029725.17	novel	2490	17	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_4	114.23112535557	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTTTGCTTCCTCCCTC	5277572	True	NA	5	True	AATAAA	-18	NA	5282258	5336689	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_5282521_5308693_5308823_5331948_5332153_5335183_5335345_5336487
transcript_81269.nic	chr17	+	1337	5	ISM	ENSG00000029725.17	ENST00000341923.10	2490	17	-228	44624	-6	1910	5prime_fragment	FALSE	canonical	3	257	junction_4	28.4462211901687	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTGAGATGGTTTTGC	5277572	True	NA	NA	False	AATAAA	-23	NA	5282258	5338599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_5282521_5308693_5308823_5331948_5332153_5335183_5335345_5338018
transcript_81270.nic	chr17	+	723	4	ISM	ENSG00000029725.17	ENST00000341923.10	2490	17	-228	47912	-6	-1378	5prime_fragment	FALSE	canonical	3	280	junction_2	20.2868320729373	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGGAGGAAAATTTAGAAAA	5277572	True	NA	3	True	NA	NA	NA	5282258	5335311	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_5282521_5308693_5308823_5331948_5332153_5335183
transcript_81275.nic	chr17	+	298	2	ISM	ENSG00000029725.17	ENST00000341923.10	2490	17	-228	74494	-6	-73	5prime_fragment	FALSE	canonical	3	322	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATGCAGAATTTTTACGT	5277572	True	NA	-35	True	NA	NA	NA	5282258	5308729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_5282521_5308693
transcript_81278.known	chr17	-	3611	17	FSM	ENSG00000108559.12	ENST00000573584.6	3611	17	0	0	0	0	multi-exon	TRUE	canonical	3	256	junction_1	68.6894904170208	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTATATGTTTCCTTTAT	-5416547	True	NA	-3	True	AATAAA	-17	NA	5419662	5384832	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_5386270_5386707_5386827_5386983_5387111_5387385_5387467_5387604_5387671_5387778_5387905_5388801_5388961_5391560_5391663_5394890_5394982_5399551_5399651_5404098_5404247_5405056_5405244_5408732_5408910_5410702_5410790_5414008_5414135_5416512_5416683_5419353
transcript_81311.known	chr17	-	5535	12	FSM	ENSG00000005100.13	ENST00000225296.8	5535	12	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_6	5.39513095453011	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGATGTGTGTGGCTTGTT	-5463271	False	NA	-7	True	ATTAAA	-14	NA	5468982	5440916	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_5444514_5448808_5448896_5450202_5450407_5450806_5450935_5453579_5453669_5453820_5453981_5455159_5455272_5455996_5456183_5460938_5461110_5462318_5462547_5463528_5463690_5468570
transcript_81317.known	chr17	-	2081	11	FSM	ENSG00000108559.12	ENST00000574867.5	2081	11	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_5	49.5730773706858	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCAGAGGTTGCAGTGAGC	-5416547	True	NA	NA	False	NA	NA	NA	5419662	5388375	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_5388961_5391560_5391663_5394890_5394982_5399551_5399651_5404098_5404247_5405056_5405244_5408732_5408910_5410702_5410790_5414008_5414135_5416512_5416683_5419353
transcript_81319.known	chr17	-	2040	11	FSM	ENSG00000005100.13	ENST00000574023.1	2040	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_10	6.58483105326173	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTGCCTGACTTCCAGGA	-5463118	False	NA	NA	False	NA	NA	NA	5468829	5444097	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_5444514_5448808_5448896_5450202_5450407_5450806_5450935_5453579_5453669_5453820_5453981_5455159_5455272_5455996_5456183_5460938_5461110_5462318_5462547_5468570
transcript_81324.known	chr17	+	995	7	FSM	ENSG00000129197.15	ENST00000381209.8	995	7	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_4	205.091578460832	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATTTAAATTTGGTATT	5406686	True	NA	27	True	AATAAA	-16	NA	5420181	5432877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5426083_5426235_5426300_5428070_5428212_5432541
transcript_81329.known	chr17	+	1394	6	FSM	ENSG00000129197.15	ENST00000381208.9	1394	6	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_5	280.355773973	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	5419602	False	NA	26	True	AATAAA	-15	NA	5419640	5432876	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5426083_5426235_5426300_5432541
transcript_81331.known	chr17	+	1471	6	FSM	ENSG00000129197.15	ENST00000539417.6	1471	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	303.260284244409	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	5419602	False	NA	26	True	AATAAA	-15	NA	5419640	5432876	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5426083_5428070_5428212_5432541
transcript_81333.known	chr17	+	1688	6	FSM	ENSG00000129197.15	ENST00000571613.5	1688	6	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_4	201.537490308875	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	5419602	False	NA	26	True	AATAAA	-15	NA	5419640	5432876	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5426300_5428070_5428212_5432541
transcript_81337.known	chr17	+	1423	6	FSM	ENSG00000129197.15	ENST00000571558.5	1423	6	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_3	280.296557238936	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	5419602	False	NA	26	True	AATAAA	-15	NA	5419640	5432876	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5426235_5426300_5428070_5428212_5432541
transcript_81339.known	chr17	-	1169	6	FSM	ENSG00000108561.8	ENST00000225698.8	1169	6	0	0	0	0	multi-exon	FALSE	canonical	3	6398	junction_4	383.96770697547	3530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTTTGTCTTTTTCTAT	-5347187	True	NA	-25	True	CATAAA	-20	NA	5439155	5432776	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_5433165_5433292_5433416_5433668_5433768_5434872_5434967_5438122_5438274_5438841
transcript_81343.known	chr17	+	815	5	FSM	ENSG00000129197.15	ENST00000327154.10	815	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	331.096662622866	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACTCATTCCCTCTGAGG	5419781	True	NA	-78	True	NA	NA	NA	5419887	5432608	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5426083_5432541
transcript_81345.known	chr17	+	1547	5	FSM	ENSG00000129197.15	ENST00000571043.5	1547	5	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_4	299.256996576521	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	5419602	False	NA	26	True	AATAAA	-15	NA	5419640	5432876	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5426300_5432541
transcript_81346.known	chr17	+	2728	5	FSM	ENSG00000129197.15	ENST00000573126.1	2728	5	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_3	189.454974862103	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCCGACATCTGTTCTT	5406704	True	NA	18	True	AAGAAA	-7	NA	5420199	5432704	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5428212_5432541
transcript_81348.known	chr17	+	1282	5	FSM	ENSG00000129197.15	ENST00000573577.5	1282	5	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_3	360.243927776722	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	5419602	False	NA	26	True	AATAAA	-15	NA	5419640	5432876	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5426235_5426300_5432541
transcript_81350.known	chr17	+	1359	5	FSM	ENSG00000129197.15	ENST00000575599.5	1359	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	340.130122159153	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	5419602	False	NA	26	True	AATAAA	-15	NA	5419640	5432876	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5428070_5428212_5432541
transcript_81357.known	chr17	+	1057	4	FSM	ENSG00000129197.15	ENST00000536255.6	1057	4	0	0	0	0	multi-exon	TRUE	canonical	3	322	junction_3	241.960511011382	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTCTTGGTCTTTTGTG	5419602	False	NA	29	True	AAGAAA	-18	NA	5419640	5432715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5432541
transcript_81364.known	chr17	+	597	3	FSM	ENSG00000129197.15	ENST00000572174.5	597	3	0	0	0	0	multi-exon	FALSE	canonical	3	774	junction_2	53	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCTGTAAGATAGTAGTAT	5406671	True	NA	NA	False	NA	NA	NA	5420166	5423069	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_5420292_5421295_5421467_5422768
transcript_81365.known	chr17	-	767	3	FSM	ENSG00000108561.8	ENST00000573406.1	767	3	0	0	0	0	multi-exon	FALSE	canonical	3	6398	junction_1	109.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACCCCGTCTCTACTAAA	-5347187	True	NA	NA	False	NA	NA	NA	5439155	5434664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_5434967_5438122_5438274_5438841
transcript_81372.nic	chr17	-	1120	8	NIC	ENSG00000072849.11	novel	657	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_4	336.906030621875	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTTCTCTCACTGTAT	-5480614	True	NA	-44	True	AATAAA	-9	NA	5486183	5474308	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_5474790_5480053_5480145_5480386_5480544_5481100_5481143_5481295_5481390_5482808_5482883_5485150_5485217_5486068
transcript_81378.known	chr17	-	4167	7	FSM	ENSG00000072849.11	ENST00000158771.9	4167	7	0	0	0	0	multi-exon	FALSE	canonical	3	728	junction_2	50.6557005676558	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTATCTGGTATTTTTAA	-5480609	True	NA	-2	True	AATAAA	-25	NA	5486178	5471253	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_5474790_5480053_5480145_5480386_5480583_5481295_5481390_5482808_5482883_5485150_5485217_5486068
transcript_81379.known	chr17	-	657	7	FSM	ENSG00000072849.11	ENST00000570848.5	657	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	367.467307691749	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGTGTGGACACTTTTG	-5480609	True	NA	NA	False	NA	NA	NA	5486178	5474609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_5474790_5480053_5480145_5481100_5481143_5481295_5481390_5482808_5482883_5485150_5485217_5486068
transcript_8138.known	chr1	+	1742	10	FSM	ENSG00000178028.14	ENST00000372289.7	1742	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	98.6510247861522	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGCTGCTTCCTTTTCCT	44208773	True	NA	17	True	AATAGA	-15	NA	44213470	44220673	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_44213859_44214349_44214442_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
transcript_81382.known	chr17	-	570	6	FSM	ENSG00000072849.11	ENST00000571476.5	570	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	305.134462163814	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGCTTCGCCTGGGGTG	-5480579	True	NA	NA	False	NA	NA	NA	5486148	5474726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_5474790_5480053_5480145_5480386_5480583_5482808_5482883_5485150_5485217_5486068
transcript_81389.known	chr17	-	589	4	FSM	ENSG00000072849.11	ENST00000572834.5	589	4	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	352.794872726663	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAACAAATATCCTGCCA	-5480593	True	NA	NA	False	NA	NA	NA	5486162	5474451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_5474790_5480053_5480145_5485150_5485217_5486068
transcript_81390.known	chr17	+	2502	3	FSM	ENSG00000167842.16	ENST00000611091.5	2502	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	12	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTTGGTTTTTTATTTTC	5483823	True	NA	14	True	ATTAAA	-16	NA	5486565	5490811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_5486685_5488195_5488590_5488822
transcript_81392.known	chr17	+	2204	2	FSM	ENSG00000167842.16	ENST00000573759.1	2204	2	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTACATGAAATATGTT	5486352	True	NA	-60	True	AATGAA	-24	NA	5486395	5490737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_5486685_5488822
transcript_81393.known	chr17	-	1500	2	FSM	ENSG00000286190.2	ENST00000568641.2	1500	2	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	0	224	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCAGTTCTCCATTAATT	-5500170	True	NA	-2	True	AATAAA	-23	NA	5501006	5499426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_5499951_5500030
transcript_81396.known	chr17	+	5884	9	FSM	ENSG00000179314.16	ENST00000574946.5	5884	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	33.6375441285478	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGTTGAGTTTAATTTC	NA	False	NA	21	True	AATAAA	-18	NA	6069105	6124427	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_6069208_6080370_6081086_6087989_6088105_6090320_6090506_6095101_6095224_6109606_6109767_6110770_6110936_6117987_6118189_6120308
transcript_81398.known	chr17	+	6056	9	FSM	ENSG00000179314.16	ENST00000317744.10	6056	9	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	16.2480768092719	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGTTGAGTTTAATTTC	6068837	True	NA	21	True	AATAAA	-18	NA	6070378	6124427	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_6070653_6080370_6081086_6087989_6088105_6090320_6090506_6095101_6095224_6109606_6109767_6110770_6110936_6117987_6118189_6120308
transcript_81399.known	chr17	+	2129	9	FSM	ENSG00000179314.16	ENST00000574232.5	2129	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	33.9521722427299	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCTGCGCTCCCCACTCT	6071095	True	NA	NA	False	NA	NA	NA	6071107	6120710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_6071172_6080370_6081086_6087989_6088105_6090320_6090506_6095101_6095224_6109606_6109767_6110770_6110936_6117987_6118189_6120308
transcript_81410.known	chr17	+	891	7	FSM	ENSG00000129195.16	ENST00000570337.6	891	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	325.802087163357	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCCCTGTCTGACCGCCA	6436083	True	NA	NA	False	AAAAAG	-22	NA	6444442	6450365	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_6444489_6445075_6445405_6447462_6447759_6449311_6449408_6449703_6449779_6450027_6450073_6450361
transcript_81411.known	chr17	+	831	6	FSM	ENSG00000129195.16	ENST00000573557.5	831	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	313.339177250468	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGAGTCGTCAGTACCCCT	6436082	True	NA	NA	False	NA	NA	NA	6444441	6450441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_6444489_6445075_6445343_6447462_6447759_6449311_6449408_6450027_6450073_6450361
transcript_81412.known	chr17	+	1551	6	FSM	ENSG00000129195.16	ENST00000572595.6	1551	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	233.462116841255	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCATTTGACATCTGTTCC	6436086	True	NA	13	True	AATAAA	-7	NA	6444445	6451055	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_6444489_6445075_6445405_6446094_6446188_6447462_6447759_6449311_6449408_6450361
transcript_81414.known	chr17	+	1908	6	FSM	ENSG00000129195.16	ENST00000572447.6	1908	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	272.919475303614	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATCTGTCACAGATAATAC	6436095	True	NA	5	True	AATAAA	-18	NA	6444454	6451469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_6444489_6445075_6445405_6447462_6447759_6449311_6449408_6450027_6450073_6450361
transcript_81420.known	chr17	+	1002	5	FSM	ENSG00000129195.16	ENST00000571373.5	1002	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	334.343386356004	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGGTCTGATCTTGTGTA	6436083	True	NA	NA	False	NA	NA	NA	6444442	6449938	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_6444489_6445075_6445405_6447462_6447759_6449311_6449408_6449703
transcript_81422.known	chr17	+	1473	5	FSM	ENSG00000129195.16	ENST00000250056.12	1473	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	335.540887970453	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTTCCCTTTCACCGG	6436081	True	NA	23	True	AATAAA	-17	NA	6444440	6451065	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_6444489_6445075_6445405_6447462_6447759_6449311_6449408_6450361
transcript_81431.known	chr17	-	4647	19	FSM	ENSG00000198920.11	ENST00000361413.8	4647	19	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_18	11.3242065647438	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGAGCATTGCTCTCCGTG	-6638475	True	NA	-16	True	AATAAA	-24	NA	6640711	6578146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_6579865_6589778_6590004_6590509_6590631_6594971_6595054_6596157_6596344_6599236_6599321_6600379_6600459_6606872_6606963_6607180_6607271_6608347_6608465_6609993_6610161_6611918_6612149_6620787_6620999_6622881_6623098_6623508_6623572_6624754_6624862_6628116_6628742_6635010_6635172_6640636
transcript_81435.known	chr17	+	391	4	FSM	ENSG00000129235.11	ENST00000576020.5	391	4	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	1506.06647337434	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAAACTGTATACTTGCT	6640888	False	NA	-8	True	NA	NA	NA	6640984	6643067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_6641101_6641752_6641835_6642248_6642325_6642950
transcript_81436.known	chr17	+	459	4	FSM	ENSG00000129235.11	ENST00000570330.5	459	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1575.43736431789	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAACTGGCATGTGT	6629682	True	NA	12	True	AATAAA	-41	NA	6641015	6643114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_6641153_6641752_6641835_6642248_6642325_6642950
transcript_81438.known	chr17	+	1917	4	FSM	ENSG00000129235.11	ENST00000250101.10	1917	4	0	0	0	0	multi-exon	FALSE	canonical	3	2916	junction_3	304.055185049615	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGCCAATGTAGAATCT	6629726	True	NA	-47	True	NA	NA	NA	6641059	6644541	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_6641228_6641752_6641835_6642248_6642325_6642950
transcript_81439.known	chr17	+	505	4	FSM	ENSG00000129235.11	ENST00000573792.5	505	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1574.51163504399	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGGCATGTGTCTAAAC	6641446	False	NA	18	True	AATAAA	-12	NA	6641465	6643120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_6641643_6641752_6641835_6642248_6642325_6642950
transcript_8144.known	chr1	-	1733	9	FSM	ENSG00000117419.16	ENST00000372257.7	1733	9	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_8	337.182813915538	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGAGGCTGCT	-44347565	True	NA	-5	True	AATAAA	-39	NA	44355257	44221069	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_44221641_44247938_44248039_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44339044_44339323_44352849_44352926_44354891
transcript_81440.known	chr17	-	1629	4	FSM	ENSG00000108590.11	ENST00000225728.8	1629	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	20.8859335970941	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGAAGGTGTGCTCTGCA	-6649088	True	NA	NA	False	AATAAA	-22	NA	6651605	6643310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_6644660_6649981_6650079_6650355_6650434_6651500
transcript_81442.known	chr17	-	593	3	FSM	ENSG00000108590.11	ENST00000575197.1	593	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	67	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCCTGTGGATTTGTAA	-6649117	True	NA	-12	True	AATAGA	-31	NA	6651634	6644278	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_6644660_6650355_6650434_6651500
transcript_81444.known	chr17	+	2100	1	FSM	ENSG00000129235.11	ENST00000574429.1	2100	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCATGTGTCTAAACAAT	6629690	True	NA	21	True	AATAAA	-15	NA	6641023	6643123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_6641000_6643100
transcript_81445.known	chr17	-	3231	12	FSM	ENSG00000141485.17	ENST00000433363.7	3231	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	2.49627822140836	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCACTGTGCTGCTGACT	-6713277	True	NA	-11	True	ATTAAA	-21	NA	6713369	6684718	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_6686339_6687528_6687667_6690778_6690941_6693043_6693163_6694096_6694198_6695725_6695942_6701003_6701127_6702969_6703139_6703877_6704057_6706641_6706779_6707027_6707157_6713231
transcript_81446.known	chr17	-	1723	11	FSM	ENSG00000141485.17	ENST00000573648.5	1723	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.3	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCCACACACCACCAAAACC	-6713285	True	NA	NA	False	NA	NA	NA	6713377	6686096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_6686339_6690778_6690941_6693043_6693163_6694096_6694198_6695725_6695942_6701003_6701127_6702969_6703139_6703877_6704057_6706641_6706779_6707027_6707157_6713231
transcript_81447.known	chr17	+	1009	4	FSM	ENSG00000274114.2	ENST00000634558.1	1009	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	1.24721912892465	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACACACACACACACACC	6656829	False	NA	NA	False	AAAAAG	-36	NA	6657033	6693211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_6657405_6657644_6657784_6689875_6690028_6692864
transcript_8145.nnic	chr1	-	1410	9	NNC	ENSG00000117419.16	novel	1733	9	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_8	387.703958420597	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGAGGCTGCT	-44347610	True	NA	-5	True	AATAAA	-39	NA	44355302	44221069	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_44221641_44247938_44248039_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44339044_44339323_44352849_44352926_44355259
transcript_81454.known	chr17	+	700	4	FSM	ENSG00000274114.2	ENST00000603173.6	700	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	3.29983164553722	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGCTAGAATGATCTGAAT	6656973	True	NA	NA	False	AATAAA	-13	NA	6657303	6658491	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_6657405_6657644_6657784_6657861_6657985_6658154
transcript_81470.known	chr17	-	1948	3	FSM	ENSG00000215067.11	ENST00000653385.1	1948	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACACCTCTATATTTCTG	-7012033	True	NA	NA	False	GGGGCT	-38	NA	7012334	6875231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_6876888_6880909_6881063_7012195
transcript_81472.known	chr17	+	2392	14	FSM	ENSG00000108839.12	ENST00000251535.11	2392	14	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	3.9102353929658	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGTAGTCTTCTTTTGGT	6995816	True	NA	22	True	AATAAA	-35	NA	6996048	7010754	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_6996253_6996825_6997028_6998508_6998591_6998714_6998838_6998952_6999057_6999305_6999467_7000335_7000480_7001601_7001812_7005256_7005344_7005857_7006028_7006485_7006608_7009746_7009848_7009955_7010127_7010243
transcript_8148.nnic	chr1	-	1375	8	NNC	ENSG00000117419.16	novel	1733	9	NA	NA	-83	0	at_least_one_novel_splicesite	FALSE	canonical	3	135	junction_7	366.026317778001	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGAGGCTGCT	NA	False	NA	-5	True	AATAAA	-39	NA	44355343	44221069	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_44221641_44247938_44248039_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44339044_44339323_44355259
transcript_81481.known	chr17	+	1662	8	FSM	ENSG00000161939.19	ENST00000547863.5	1662	8	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_1	312.408549884308	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCGTGCTGTCTGCTTAA	7001496	False	NA	18	True	AATAAA	-14	NA	7012659	7017520	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7012758_7013665_7013743_7014144_7014879_7015061_7015157_7015773_7015876_7016494_7016686_7016909_7017015_7017260
transcript_81484.known	chr17	+	783	4	FSM	ENSG00000219200.12	ENST00000549393.2	783	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	640.056768315645	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCTCTTCAGCCCTGT	7001484	True	NA	27	True	AATAAA	-6	NA	7012647	7014519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7012762_7013318_7013536_7013665_7013743_7014144
transcript_81485.known	chr17	+	591	3	FSM	ENSG00000219200.12	ENST00000552039.2	591	3	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_1	552.5	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGTCTGTGCTTGAG	7001468	True	NA	40	True	AATAAA	-19	NA	7012631	7014532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7012758_7013665_7013743_7014144
transcript_81487.known	chr17	+	1485	2	FSM	ENSG00000219200.12	ENST00000552176.2	1485	2	0	0	0	0	multi-exon	FALSE	canonical	3	1379	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGTCTGTGCTTGAG	7001482	True	NA	40	True	AATAAA	-19	NA	7012645	7014532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7013743_7014144
transcript_81488.known	chr17	+	739	3	FSM	ENSG00000219200.12	ENST00000552321.2	739	3	0	0	0	0	multi-exon	TRUE	canonical	3	80	junction_1	649.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTCTCTTCAGCCCTGTG	7013151	False	NA	28	True	AATAAA	-7	NA	7013230	7014520	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7013517_7013665_7013743_7014144
transcript_81489.known	chr17	+	760	5	FSM	ENSG00000258315.5	ENST00000552402.5	760	5	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	274.536427455447	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCGTGCTGTCTGCTTA	7001902	True	NA	17	True	AATAAA	-13	NA	7014768	7017519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7014879_7015061_7015157_7016494_7016686_7016909_7017015_7017260
transcript_81490.known	chr17	+	764	5	FSM	ENSG00000258315.5	ENST00000546760.5	764	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_4	287.05661462506	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTCCCTCTCAGCTTCG	7001886	True	NA	4	True	AAAACA	-5	NA	7014752	7017506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7014879_7015061_7015157_7015773_7015876_7016494_7016686_7017256
transcript_81491.known	chr17	+	850	6	FSM	ENSG00000258315.5	ENST00000439424.6	850	6	0	0	0	0	multi-exon	FALSE	canonical	3	536	junction_2	91.3993435425003	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCGTGCTGTCTGCTTAA	7001915	True	NA	18	True	AATAAA	-14	NA	7014781	7017520	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7014879_7015061_7015157_7015773_7015876_7016494_7016686_7016909_7017015_7017260
transcript_81492.known	chr17	+	2343	3	FSM	ENSG00000258315.5	ENST00000549857.1	2343	3	0	0	0	0	multi-exon	FALSE	canonical	3	616	junction_2	86.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTCTGCTTAACATTA	7001887	True	NA	23	True	AATAAA	-19	NA	7014753	7017525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7014879_7015061_7017015_7017260
transcript_81493.known	chr17	+	779	5	FSM	ENSG00000258315.5	ENST00000552775.1	779	5	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_4	207.092370694818	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCGTGCTGTCTGCTTAA	7002173	False	NA	18	True	AATAAA	-14	NA	7015039	7017520	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7015157_7015773_7015876_7016494_7016686_7016909_7017015_7017256
transcript_81494.known	chr17	+	3527	9	FSM	ENSG00000161940.11	ENST00000293805.10	3527	9	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_5	4.9749371855331	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTGTGTCCTGGGTTCT	7022864	True	NA	23	True	AATAAA	-18	NA	7023049	7029644	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7023100_7023659_7023851_7024082_7024305_7024400_7024764_7025075_7025201_7026456_7026622_7026704_7026836_7026949_7027088_7027502
transcript_81500.known	chr17	-	944	8	FSM	ENSG00000141505.12	ENST00000380920.8	944	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	10.7797997028077	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGGGAAGGATAGGGTGA	-7177942	False	NA	NA	False	NA	NA	NA	7178116	7173552	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7173834_7173960_7174068_7174137_7174290_7174373_7174461_7176829_7176902_7176980_7177077_7177209_7177327_7178084
transcript_81501.nnic	chr17	-	1092	8	NNC	ENSG00000141505.12	novel	1310	9	NA	NA	-69	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	10.4939243841183	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGTTAGTTGTCTGGT	-7178011	True	NA	-5	True	AGTAAA	-17	NA	7178185	7173430	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_7173834_7173960_7174068_7174137_7174290_7174373_7174461_7176829_7176902_7176980_7177077_7177209_7177327_7178127
transcript_81503.nic	chr17	-	1879	7	ISM	ENSG00000141505.12	ENST00000380920.8	944	8	-55	-122	-55	0	intron_retention	FALSE	canonical	3	21	junction_5	6.6248689714506	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGTTAGTTGTCTGGT	-7177997	True	NA	-5	True	AGTAAA	-17	NA	7178171	7173430	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_7173834_7173960_7174068_7174137_7174290_7174373_7174461_7176829_7176902_7176980_7177077_7177209
transcript_81515.known	chr17	+	2184	20	FSM	ENSG00000072778.20	ENST00000356839.10	2184	20	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_10	89.5400991895859	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGCTCCTGTGTGACG	7207452	True	NA	15	True	AATAAA	-17	NA	7219937	7225266	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7220047_7220121_7220198_7220463_7220530_7220603_7220677_7220765_7220831_7220923_7221059_7221537_7221683_7221951_7222082_7222176_7222303_7222666_7222866_7223132_7223238_7223643_7223731_7223812_7223876_7223967_7224070_7224145_7224244_7224320_7224394_7224479_7224553_7224641_7224715_7224808_7224885_7224956
transcript_81520.known	chr17	-	3446	20	FSM	ENSG00000132535.22	ENST00000302955.11	3446	20	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_19	8.27739303507232	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGTGGCCTGGTTA	-7217547	False	NA	NA	False	NA	NA	NA	7217609	7189889	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7190815_7191266_7191359_7191892_7192003_7192944_7193118_7193482_7193585_7193666_7193715_7193843_7193872_7193963_7194001_7194318_7194496_7196219_7196335_7196472_7196576_7196756_7197053_7202902_7203048_7203192_7203330_7203423_7203594_7203691_7203817_7204007_7204059_7204198_7204253_7208173_7208240_7217117
transcript_81535.nic	chr17	+	2526	19	NIC	ENSG00000072778.20	novel	2184	20	NA	NA	1	0	intron_retention	FALSE	canonical	3	602	junction_1	72.1286573414239	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTTTGCTCCTGTGTGA	NA	False	NA	13	True	AATAAA	-15	NA	7219860	7225264	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_7220047_7220121_7220198_7220463_7220530_7220603_7220677_7220765_7220831_7220923_7221059_7221537_7221683_7221951_7222082_7222176_7222303_7222666_7223238_7223643_7223731_7223812_7223876_7223967_7224070_7224145_7224244_7224320_7224394_7224479_7224553_7224641_7224715_7224808_7224885_7224956
transcript_81541.nic	chr17	+	2354	19	NIC	ENSG00000072778.20	novel	2184	20	NA	NA	1	0	intron_retention	FALSE	canonical	3	472	junction_9	88.4245685371869	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTTTGCTCCTGTGTGA	NA	False	NA	13	True	AATAAA	-15	NA	7219860	7225264	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_7220047_7220121_7220198_7220463_7220530_7220603_7220677_7220765_7220831_7220923_7221059_7221537_7221683_7221951_7222303_7222666_7222866_7223132_7223238_7223643_7223731_7223812_7223876_7223967_7224070_7224145_7224244_7224320_7224394_7224479_7224553_7224641_7224715_7224808_7224885_7224956
transcript_81545.known	chr17	+	2191	19	FSM	ENSG00000072778.20	ENST00000350303.9	2191	19	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	182.16605672359	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTTTGCTCCTGTGTGA	7207377	True	NA	13	True	AATAAA	-15	NA	7219862	7225264	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7220047_7220121_7220198_7220603_7220677_7220765_7220831_7220923_7221059_7221537_7221683_7221951_7222082_7222176_7222303_7222666_7222866_7223132_7223238_7223643_7223731_7223812_7223876_7223967_7224070_7224145_7224244_7224320_7224394_7224479_7224553_7224641_7224715_7224808_7224885_7224956
transcript_8155.nic	chr1	-	1389	7	NIC	ENSG00000117419.16	novel	1733	9	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_6	396.102434843424	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGAGGCTGCT	-44347575	True	NA	-5	True	AATAAA	-39	NA	44355267	44221069	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_44221641_44247938_44248039_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44354891
transcript_8156.nnic	chr1	-	1107	7	NNC	ENSG00000117419.16	novel	1097	7	NA	NA	-93	0	at_least_one_novel_splicesite	FALSE	canonical	3	184	junction_6	360.919543204115	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGAGGCTGCT	NA	False	NA	-5	True	AATAAA	-39	NA	44355353	44221069	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_44221641_44247938_44248039_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44355259
transcript_81574.nic	chr17	+	2621	18	NIC	ENSG00000072778.20	novel	2184	20	NA	NA	1	0	intron_retention	FALSE	canonical	3	602	junction_1	68.1393341479904	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTTTGCTCCTGTGTGA	NA	False	NA	13	True	AATAAA	-15	NA	7219860	7225264	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_7220047_7220121_7220198_7220463_7220530_7220603_7220677_7220765_7220831_7220923_7221059_7221537_7221683_7221951_7222303_7222666_7223238_7223643_7223731_7223812_7223876_7223967_7224070_7224145_7224244_7224320_7224394_7224479_7224553_7224641_7224715_7224808_7224885_7224956
transcript_81606.nic	chr17	+	2985	17	NIC	ENSG00000072778.20	novel	2184	20	NA	NA	1	0	intron_retention	FALSE	canonical	3	602	junction_1	64.0529261138787	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTTTGCTCCTGTGTGA	NA	False	NA	13	True	AATAAA	-15	NA	7219860	7225264	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_7220047_7220121_7220198_7220463_7220530_7220603_7220677_7220765_7220831_7220923_7221059_7221537_7221683_7221951_7223238_7223643_7223731_7223812_7223876_7223967_7224070_7224145_7224244_7224320_7224394_7224479_7224553_7224641_7224715_7224808_7224885_7224956
transcript_81693.known	chr17	+	799	8	FSM	ENSG00000072778.20	ENST00000583312.5	799	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	246.206898227271	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCGGGTCAGATGCAGCCT	NA	False	NA	NA	False	NA	NA	NA	7219859	7221988	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7220047_7220121_7220198_7220463_7220530_7220603_7220677_7220765_7220831_7220923_7221059_7221537_7221683_7221936
transcript_817.nic	chr1	-	2922	12	NIC	ENSG00000221978.13	novel	1598	12	NA	NA	-476	0	combination_of_known_junctions	FALSE	canonical	3	118	junction_6	315.469085334289	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGGACATCCGGAGCGTT	-1399801	False	NA	-24	True	AATAAA	-15	NA	1399811	1386501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_1387583_1387776_1387870_1387953_1388066_1390229_1390372_1390458_1390564_1390765_1390866_1392678_1392804_1393395_1393461_1395393_1395515_1398232_1398343_1398596_1398672_1399018
transcript_81702.known	chr17	+	2352	19	FSM	ENSG00000072778.20	ENST00000322910.9	2352	19	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_9	88.3547143934921	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTTGCTCCTGTGTGAC	NA	False	NA	14	True	AATAAA	-16	NA	7219843	7225265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7220198_7220463_7220530_7220603_7220677_7220765_7220831_7220923_7221059_7221537_7221683_7221951_7222082_7222176_7222303_7222666_7222866_7223132_7223238_7223643_7223731_7223812_7223876_7223967_7224070_7224145_7224244_7224320_7224394_7224479_7224553_7224641_7224715_7224808_7224885_7224956
transcript_81703.known	chr17	+	2227	21	FSM	ENSG00000072778.20	ENST00000543245.6	2227	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	229.923269809735	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGCTCCTGTGTGACG	NA	False	NA	15	True	AATAAA	-17	NA	7217124	7225266	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7217174_7217715_7217819_7220121_7220198_7220463_7220530_7220603_7220677_7220765_7220831_7220923_7221059_7221537_7221683_7221951_7222082_7222176_7222303_7222666_7222866_7223132_7223238_7223643_7223731_7223812_7223876_7223967_7224070_7224145_7224244_7224320_7224394_7224479_7224553_7224641_7224715_7224808_7224885_7224956
transcript_81714.known	chr17	-	1768	5	FSM	ENSG00000040633.13	ENST00000571362.5	1768	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	232.270316657123	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCACTGTCCTGCTCG	-7239429	False	24148	-22	True	AATAAA	-26	NA	7239439	7235028	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7235841_7235929_7236567_7237384_7237478_7237628_7237661_7239245
transcript_81721.known	chr17	-	1978	5	FSM	ENSG00000040633.13	ENST00000320316.8	1978	5	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_4	77.7383431776109	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTATAGCCCTCACTG	-7239447	False	24148	-31	True	AATAAA	-17	NA	7239457	7235037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7235841_7235929_7236768_7237384_7237478_7237628_7237661_7239245
transcript_81734.known	chr17	-	1944	4	FSM	ENSG00000040633.13	ENST00000576955.5	1944	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	276.241842514047	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTATAGCCCTCACTG	-7239445	False	24148	-31	True	AATAAA	-17	NA	7239455	7235037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7235841_7235929_7236768_7237384_7237478_7239245
transcript_81736.known	chr17	-	370	4	FSM	ENSG00000040633.13	ENST00000574899.1	370	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	290.550435476451	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAGAAGGGCAGCTCAAG	-7238161	False	NA	NA	False	AAGAAA	-12	NA	7238171	7236636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7236763_7237384_7237478_7237628_7237661_7238052
transcript_81740.known	chr17	+	1304	9	FSM	ENSG00000170291.16	ENST00000354429.7	1522	9	252	-34	-3	0	multi-exon	FALSE	canonical	3	59	junction_1	433.064083017745	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGAAGTACTTTGGTA	7251761	True	NA	NA	False	AATAAA	-19	NA	7252052	7259931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7252083_7252425_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587_7258684_7258825_7258927_7259570
transcript_81741.known	chr17	+	1389	9	FSM	ENSG00000170291.16	ENST00000396627.7	1389	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	437.872966024394	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTTGGTAGCTATTTAA	7252031	False	NA	NA	False	AATAAA	-28	NA	7252231	7259940	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7252338_7252425_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587_7258684_7258825_7258927_7259570
transcript_81745.known	chr17	+	1423	8	FSM	ENSG00000170291.16	ENST00000396628.7	1491	8	71	-3	0	0	multi-exon	FALSE	canonical	3	132	junction_7	431.921241875962	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTTGGTAGCTATTTAA	7251701	True	NA	NA	False	AATAAA	-28	NA	7252285	7259940	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587_7258684_7258825_7258927_7259570
transcript_81747.known	chr17	-	1767	8	FSM	ENSG00000175826.12	ENST00000574322.6	1767	8	0	0	0	0	multi-exon	FALSE	canonical	3	573	junction_4	46.9298216837152	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGCCTTAGGTCCTTCTCT	-7251724	False	NA	-5	True	TTTAAA	-27	NA	7251734	7243590	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7244246_7244550_7244636_7246025_7246138_7246253_7246371_7246790_7246863_7247063_7247183_7247276_7247344_7251194
transcript_81750.known	chr17	+	827	7	FSM	ENSG00000170291.16	ENST00000356683.7	2404	7	285	1292	-32	-143	multi-exon	FALSE	canonical	3	59	junction_1	448.388379520354	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTAGAGTCCCAGCCC	7251955	False	NA	NA	False	NA	NA	NA	7252023	7258639	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7252083_7252425_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587
transcript_81751.known	chr17	+	1083	7	FSM	ENSG00000170291.16	ENST00000570322.6	1083	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	458.592653912186	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTTGGTAGCTATTTAA	7245170	True	NA	NA	False	AATAAA	-28	NA	7252524	7259940	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587_7258684_7259570
transcript_81752.known	chr17	+	2197	7	ISM	ENSG00000170291.16	ENST00000396627.7	1389	9	-31	9	-14	0	intron_retention	FALSE	canonical	3	20	junction_1	456.140938258731	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGAAGTACTTTGGTA	7251909	False	NA	NA	False	AATAAA	-19	NA	7252200	7259931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_7252338_7252425_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587
transcript_81753.known	chr17	+	2209	6	FSM	ENSG00000170291.16	ENST00000574993.6	2209	6	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_5	419.015226453646	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTTGGTAGCTATTTAA	7251701	True	NA	NA	False	AATAAA	-28	NA	7252285	7259940	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587
transcript_81755.known	chr17	+	671	5	FSM	ENSG00000170291.16	ENST00000574255.6	671	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	424.850561962674	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTTTTTTGACTTTTT	7251764	True	NA	37	True	AATAAA	-27	NA	7252055	7254913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7252083_7252425_7252597_7252769_7252831_7252917_7252999_7254582
transcript_81756.known	chr17	+	473	5	FSM	ENSG00000170291.16	ENST00000570500.6	473	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	447.022370804863	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGCCTTTCCTGGGGGGC	7252036	False	NA	NA	False	NA	NA	NA	7252236	7254633	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7252346_7252425_7252597_7252769_7252831_7252917_7252999_7254582
transcript_81757.known	chr17	-	605	5	FSM	ENSG00000181885.18	ENST00000575313.1	605	5	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_4	525.585863584629	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCATCCTGGGAGGTGCAC	-7262599	True	NA	NA	False	NA	NA	NA	7263200	7260488	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7260537_7260641_7260727_7260820_7260986_7261820_7262086_7263158
transcript_81760.known	chr17	-	1228	5	FSM	ENSG00000181885.18	ENST00000397317.8	1228	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_4	507.919961706567	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTTTTTCCCTTCAGGG	-7262612	True	NA	-40	True	AATAAA	-19	NA	7263213	7260136	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7260537_7260641_7260727_7260820_7260986_7261820_7262344_7263158
transcript_81764.known	chr17	+	687	4	FSM	ENSG00000170291.16	ENST00000573657.6	687	4	0	0	0	0	multi-exon	FALSE	canonical	3	923	junction_1	87.7319148821504	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTTTTTCATTTTTTTG	7251791	False	NA	30	True	AATAAA	-20	NA	7252375	7254906	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7252597_7252769_7252831_7252917_7252999_7254582
transcript_81766.known	chr17	-	762	4	FSM	ENSG00000170296.10	ENST00000577035.5	762	4	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_3	863.472446964387	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTTGCTCCCCTCGTC	-7240718	False	24148	5	True	AATAAA	-32	NA	7241819	7240407	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7240920_7241341_7241461_7241600_7241680_7241767
transcript_81767.known	chr17	-	1319	4	FSM	ENSG00000170296.10	ENST00000302386.10	1319	4	0	0	0	0	multi-exon	FALSE	canonical	3	1594	junction_3	182.410404186701	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCACTTGGCTAGACTTTT	-7218301	True	NA	NA	False	AGTAAA	-20	NA	7242449	7240007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7240920_7241341_7241461_7241600_7241680_7242240
transcript_81768.known	chr17	-	1542	4	FSM	ENSG00000181885.18	ENST00000360325.11	1542	4	0	0	0	0	multi-exon	FALSE	canonical	3	1149	junction_3	59.2002252247968	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGGGTGTTCTACTCTCTC	-7245196	True	NA	-30	True	AATAAA	-24	NA	7262478	7259902	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7260537_7260641_7260727_7260820_7260986_7261820
transcript_8177.known	chr1	+	3042	15	FSM	ENSG00000187147.18	ENST00000361799.7	3042	15	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	220.332772442605	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTGTGTTATGTGT	44402240	True	NA	NA	False	ATTAAA	-16	NA	44405254	44651723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_44405531_44411980_44412723_44614164_44614298_44622741_44622788_44626296_44626399_44632342_44632386_44635544_44635589_44636029_44636163_44644697_44644795_44644994_44645082_44645220_44645277_44645409_44645489_44649660_44649770_44649882_44649958_44650703
transcript_81773.known	chr17	-	583	3	FSM	ENSG00000170296.10	ENST00000570856.1	583	3	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_2	1005.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTCTGTTCCCTTTC	-7218210	True	NA	NA	False	NA	NA	NA	7242358	7240573	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7240920_7241341_7241461_7242240
transcript_81776.known	chr17	+	1768	10	FSM	ENSG00000181856.15	ENST00000571308.5	1768	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	1.03040205505508	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTGCATTAATACTACAA	7281309	False	NA	-9	True	AATAAA	-8	NA	7281735	7286151	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7281968_7283244_7283362_7283472_7283646_7283737_7283863_7283973_7284090_7284216_7284380_7284484_7284673_7284834_7284940_7285087_7285190_7285704
transcript_81783.known	chr17	-	1654	9	FSM	ENSG00000006047.13	ENST00000007699.10	1654	9	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_8	24.7335804120633	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGTGGTCTTGGTCTC	-7293428	True	NA	-18	True	AGTAAA	-14	NA	7294639	7288262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7288644_7288748_7288839_7289529_7289726_7289967_7290072_7290250_7290536_7291092_7291183_7292025_7292060_7293474_7293539_7294229
transcript_81784.nic	chr17	-	1345	9	NIC	ENSG00000006047.13	novel	1654	9	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_8	38.6999677002449	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGTGGTCTTGGTCTC	-7293457	True	NA	-18	True	AGTAAA	-14	NA	7294668	7288262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_7288644_7288748_7288839_7289529_7289726_7289967_7290072_7290250_7290536_7291092_7291183_7292025_7292060_7293474_7293539_7294567
transcript_81795.known	chr17	-	4553	6	FSM	ENSG00000006047.13	ENST00000571485.5	4553	6	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_5	21.3391658693586	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGTGGTCTTGGTCTC	-7293378	True	NA	-18	True	AGTAAA	-14	NA	7294589	7288262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7288644_7288748_7288839_7289529_7289726_7289967_7290072_7290250_7290536_7291092
transcript_81796.known	chr17	-	5207	29	FSM	ENSG00000215041.10	ENST00000399464.7	5207	29	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_21	20.5328258838259	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTCGGCCTCTCTCTCGC	-7328963	True	NA	-1	True	AATAAA	-18	NA	7329335	7315627	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7316328_7317204_7317371_7317460_7317574_7317787_7317933_7318064_7318173_7318268_7318357_7318494_7318675_7319049_7319209_7320758_7320924_7321111_7321274_7321360_7321460_7321559_7321788_7321864_7322011_7322734_7322867_7322947_7323124_7323484_7323564_7323646_7323724_7323813_7324013_7324107_7324271_7324394_7324481_7324798_7324981_7325208_7325474_7325640_7325714_7326254_7326344_7326436_7326549_7326710_7327010_7327164_7327231_7327439_7327885_7329030
transcript_81799.known	chr17	-	4890	28	FSM	ENSG00000215041.10	ENST00000570460.5	4890	28	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_26	24.4148530204663	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCGTCTGATGGGAGGAGT	-7329021	True	NA	NA	False	NA	NA	NA	7329393	7315930	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7316328_7317204_7317371_7317460_7317574_7317787_7317933_7318064_7318173_7318268_7318357_7318494_7318675_7319049_7319209_7320758_7320924_7321111_7321274_7321360_7321460_7321559_7321788_7321864_7322011_7322734_7322867_7322953_7323124_7323484_7323564_7323646_7323724_7323813_7324013_7324107_7324271_7324394_7324481_7324798_7324981_7325208_7325474_7325640_7325714_7326254_7326344_7326436_7326549_7326710_7327010_7327439_7327885_7329030
transcript_81808.known	chr17	-	1586	10	FSM	ENSG00000132522.16	ENST00000571569.5	1586	10	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_9	236.107058788755	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCTGCTGCTGTTTGTG	-7310165	True	NA	-4	True	AATAAA	-18	NA	7315328	7312658	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7312840_7313028_7313125_7313211_7313292_7313379_7313470_7313567_7313722_7313905_7313989_7314079_7314160_7314290_7314404_7314487_7315120_7315251
transcript_81814.known	chr17	+	1439	7	FSM	ENSG00000132507.18	ENST00000576930.5	1439	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1864.93732393939	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGCTGCTTA	7104114	True	NA	-42	True	AATAAA	-20	NA	7307539	7312455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7307753_7308480_7308576_7309614_7309801_7311017_7311123_7311349_7311482_7311577_7311652_7311821
transcript_81816.known	chr17	+	1256	6	FSM	ENSG00000132507.18	ENST00000336452.11	1256	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	1582.7940611463	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCTGCTTATTTGAATT	7305682	True	NA	-34	True	AATAAA	-28	NA	7306998	7312463	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7307116_7309614_7309801_7311017_7311123_7311349_7311482_7311577_7311652_7311821
transcript_81817.known	chr17	+	1264	6	FSM	ENSG00000132507.18	ENST00000336458.13	1264	6	0	0	0	0	multi-exon	FALSE	canonical	3	3346	junction_1	260.314117942151	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCTGCTTATTTGAATT	7104202	True	NA	-34	True	AATAAA	-28	NA	7307627	7312463	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7307753_7309614_7309801_7311017_7311123_7311349_7311482_7311577_7311652_7311821
transcript_81818.known	chr17	+	1271	6	FSM	ENSG00000132507.18	ENST00000419711.6	1271	6	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_1	1355.76065734332	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGCTGCTTA	7299945	True	NA	-42	True	AATAAA	-20	NA	7307973	7312455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7308114_7309614_7309801_7311017_7311123_7311349_7311482_7311577_7311652_7311821
transcript_81820.known	chr17	+	1336	6	FSM	ENSG00000132507.18	ENST00000416016.2	1336	6	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	1572.00089058499	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGCTGCTTA	7306544	True	NA	-42	True	AATAAA	-20	NA	7308370	7312455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7308576_7309614_7309801_7311017_7311123_7311349_7311482_7311577_7311652_7311821
transcript_81828.known	chr17	-	1176	11	FSM	ENSG00000132522.16	ENST00000380728.7	1176	11	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_10	161.519070081523	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCTGCTGCTGTTTG	-7310197	True	NA	-6	True	AATAAA	-16	NA	7315360	7312660	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7312840_7313028_7313125_7313211_7313292_7313379_7313470_7313567_7313722_7313905_7313989_7314079_7314160_7314290_7314404_7314487_7314598_7314958_7315120_7315330
transcript_81829.known	chr17	-	1371	10	FSM	ENSG00000132522.16	ENST00000389167.9	1371	10	0	0	0	0	multi-exon	FALSE	canonical	3	709	junction_7	70.3167436990966	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCTGCTGCTGTTTGT	-7310180	True	NA	-5	True	AATAAA	-17	NA	7315343	7312659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7312840_7313028_7313125_7313211_7313292_7313379_7313470_7313567_7313722_7313905_7313989_7314079_7314160_7314290_7314404_7314487_7314598_7314958
transcript_81834.known	chr17	+	2511	22	FSM	ENSG00000072818.12	ENST00000158762.8	2511	22	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	18.405855323893	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGGTTCACTTCTTGG	7335141	True	NA	21	True	ATTAAA	-21	NA	7336528	7351477	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7336788_7337311_7337370_7341947_7342068_7342274_7342329_7342415_7342475_7343378_7343563_7343705_7343751_7343860_7343957_7344048_7344124_7344538_7344649_7346243_7346296_7346390_7346492_7346807_7346932_7347030_7347243_7347921_7347992_7348126_7348222_7348305_7348476_7348994_7349168_7349944_7350055_7350126_7350238_7350949_7351000_7351294
transcript_81846.nic	chr17	+	2457	21	NIC	ENSG00000072818.12	novel	2511	22	NA	NA	-5	0	combination_of_known_junctions	TRUE	canonical	3	4	junction_1	33.1510180839141	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCTGGTTCACTTCTTG	7335136	True	NA	20	True	ATTAAA	-20	NA	7336523	7351476	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_7336788_7341947_7342068_7342274_7342329_7342415_7342475_7343378_7343563_7343705_7343751_7343860_7343957_7344048_7344124_7344538_7344649_7346243_7346296_7346390_7346492_7346807_7346932_7347030_7347243_7347921_7347992_7348126_7348222_7348305_7348476_7348994_7349168_7349944_7350055_7350126_7350238_7350949_7351000_7351294
transcript_81857.known	chr17	+	761	5	FSM	ENSG00000072818.12	ENST00000576628.1	761	5	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	10.5237825899246	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTAGCCGGGCATGGT	7335209	True	NA	NA	False	ACTAAA	-14	NA	7336596	7342753	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7336788_7337311_7337370_7341947_7342068_7342274_7342329_7342415
transcript_81861.known	chr17	+	412	3	FSM	ENSG00000072818.12	ENST00000574499.1	412	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	82	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGGTTCACTTCTTGG	7350403	False	NA	21	True	ATTAAA	-21	NA	7350420	7351477	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7350600_7350949_7351000_7351294
transcript_81862.known	chr17	+	3051	1	FSM	ENSG00000213859.8	ENST00000576980.2	3051	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACTTGTGAAGGCTGTT	7351871	False	NA	7	True	AATAAA	-16	NA	7351888	7354939	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7351900_7354900
transcript_81864.known	chr17	+	3023	13	FSM	ENSG00000174292.13	ENST00000576812.5	3023	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	9.21464715668605	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGTTACAAAGTTTATA	NA	False	NA	25	True	NA	NA	NA	7380836	7389737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7381115_7382835_7383090_7383249_7383321_7383424_7383617_7383708_7383865_7383969_7384254_7384483_7384755_7386560_7386656_7386974_7387155_7387377_7387458_7388405_7388705_7388787_7388884_7388970
transcript_81873.known	chr17	-	1689	8	FSM	ENSG00000187838.17	ENST00000324822.15	1689	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_7	75.4878014202646	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTATGTAATAGGGGAGG	-7386016	False	NA	0	True	TATAAA	-26	NA	7394570	7389726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7390442_7390633_7390796_7392790_7392953_7393143_7393365_7393466_7393510_7393600_7393837_7394103_7394160_7394476
transcript_81874.known	chr17	-	2032	8	FSM	ENSG00000187838.17	ENST00000574401.5	2032	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_7	75.4878014202646	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAGATGTATGTAATAG	-7386253	False	NA	-6	True	TATAAA	-20	NA	7394807	7389732	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7390442_7390633_7390796_7392790_7392953_7393143_7393365_7393466_7393510_7393600_7393837_7394103_7394272_7394476
transcript_81880.known	chr17	-	1740	7	FSM	ENSG00000187838.17	ENST00000573070.5	1740	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_6	98.2554776533547	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTATGTAATAGGGGAGG	-7386288	False	75	0	True	TATAAA	-26	NA	7394842	7389726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7390442_7390633_7390796_7392790_7392953_7393466_7393510_7393600_7393837_7394103_7394160_7394476
transcript_81881.nic	chr17	-	1850	7	NIC	ENSG00000187838.17	novel	1752	8	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_3	84.5782018147834	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTATGTAATAGGGGAGG	-7386290	False	75	0	True	TATAAA	-26	NA	7394844	7389726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_7390442_7390633_7390796_7392790_7392953_7393466_7393510_7393600_7393837_7394103_7394268_7394476
transcript_81892.known	chr17	-	446	4	FSM	ENSG00000205544.4	ENST00000302422.4	446	4	0	0	0	0	multi-exon	FALSE	canonical	3	1230	junction_3	29.5334085777823	183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGAGTCTTTGTTCATC	-7395543	True	NA	-23	True	AATAAA	-1	NA	7404097	7402974	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7403210_7403309_7403391_7403657_7403690_7403999
transcript_81893.known	chr17	-	1965	7	FSM	ENSG00000187838.17	ENST00000576201.5	1965	7	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_4	38.6134691526156	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAGATGTATGTAATAG	-7385981	False	8554	-6	True	TATAAA	-20	NA	7394535	7389732	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7390442_7390633_7390796_7392790_7392953_7393143_7393365_7393466_7393510_7393600_7393837_7394103
transcript_81894.known	chr17	-	1605	7	FSM	ENSG00000187838.17	ENST00000576362.5	1605	7	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	89.5105518298758	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTGTAACTTTTTGGAC	-7385714	False	NA	-27	True	AAAAAG	-30	NA	7394268	7389753	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7390442_7390633_7390796_7392790_7392881_7393143_7393365_7393466_7393510_7393600_7393837_7394103
transcript_81895.known	chr17	-	2310	5	FSM	ENSG00000187838.17	ENST00000571541.5	2310	5	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_3	32.6525267016199	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATGTATGTAATAGGGG	-7385954	False	NA	-3	True	TATAAA	-23	NA	7394508	7389729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7390442_7390633_7390796_7392790_7392953_7393143_7393510_7393600
transcript_81898.known	chr17	+	2560	11	FSM	ENSG00000170175.11	ENST00000306071.7	2560	11	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_1	37.7380444644393	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGCATTGGTAATGAGAA	7444767	True	NA	14	True	ATTAAA	-18	NA	7445060	7457710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7445186_7445269_7445410_7446068_7446114_7446832_7446943_7447042_7447152_7447502_7447651_7448578_7448789_7454296_7454521_7455283_7455457_7455793_7455942_7456582
transcript_8190.nic	chr1	+	2003	11	NIC	ENSG00000187147.18	novel	1200	10	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	1	196	junction_6	127.613322188555	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTGTGTTATGTGT	NA	False	NA	NA	False	ATTAAA	-16	NA	44631948	44651723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_44632209_44632342_44632386_44635544_44635589_44636029_44636163_44644697_44644795_44644994_44645082_44645220_44645277_44645409_44645489_44649660_44649770_44649882_44649958_44650703
transcript_81906.known	chr17	+	1623	10	FSM	ENSG00000170175.11	ENST00000536404.6	1623	10	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	14.5381575411521	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGATCTTGAAGAAGCTC	7444933	True	NA	NA	False	NA	NA	NA	7445502	7456926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7445615_7446068_7446114_7446832_7446943_7447042_7447152_7447502_7447651_7448578_7448789_7454296_7454521_7455283_7455457_7455793_7455942_7456582
transcript_8191.nic	chr1	+	2081	11	NIC	ENSG00000187147.18	novel	1200	10	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	1	196	junction_6	130.489118320265	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTGTGTTATGTGT	NA	False	NA	NA	False	ATTAAA	-16	NA	44631948	44651723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_44632209_44632342_44632386_44635544_44635667_44636029_44636163_44644697_44644795_44644994_44645082_44645220_44645277_44645409_44645489_44649660_44649770_44649882_44649958_44650703
transcript_81916.nic	chr17	+	2136	9	NIC	ENSG00000170175.11	novel	1623	10	NA	NA	-36	-97	combination_of_known_junctions	FALSE	canonical	3	27	junction_5	33.6616900199619	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGGTCTTGTGGTCGTT	7445173	False	NA	23	True	AATAAA	-32	NA	7445466	7457613	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_7445615_7446068_7446114_7446832_7446943_7447042_7447152_7447502_7447651_7454296_7454521_7455283_7455457_7455793_7455942_7456582
transcript_81922.known	chr17	+	2578	5	FSM	ENSG00000161958.11	ENST00000293829.9	2578	5	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	28.429737951659	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGTCTGTCATCTGTCG	7438886	False	NA	20	True	ATTAAA	-20	NA	7439511	7444937	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7439814_7441470_7441582_7441775_7441880_7442593_7442793_7443075
transcript_81924.known	chr17	+	2315	5	FSM	ENSG00000161958.11	ENST00000575082.5	2315	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	26.8374738006393	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTTCTCAATTAAAGACG	7439965	True	NA	-15	True	NA	NA	NA	7440742	7444902	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7440817_7441470_7441582_7441775_7441880_7442593_7442793_7443075
transcript_81925.nnic	chr17	+	2404	5	NNC	ENSG00000161958.11	novel	2315	5	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	35.3438467063222	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGTCTGTCATCTGTCG	7440030	True	NA	20	True	ATTAAA	-20	NA	7440807	7444937	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_7440936_7441470_7441582_7441775_7441880_7442593_7442793_7443075
transcript_81927.nic	chr17	+	2867	4	ISM	ENSG00000161958.11	ENST00000293829.9	2578	5	-11	5	-11	-5	intron_retention	FALSE	canonical	2	22	junction_1	32.7854981491648	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAAGTGCTGTCTGTCATC	7438875	False	NA	15	True	ATTAAA	-15	NA	7439500	7444932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_7439814_7441470_7441582_7441775_7441880_7442593
transcript_81928.nic	chr17	+	2630	4	ISM	ENSG00000161958.11	ENST00000575082.5	2315	5	-2	-30	-1	-5	intron_retention	FALSE	canonical	3	26	junction_1	30.9012764928714	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAAGTGCTGTCTGTCATC	7440723	False	NA	15	True	ATTAAA	-15	NA	7440740	7444932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_7440817_7441470_7441582_7441775_7441880_7442593
transcript_81929.nnic	chr17	+	2682	4	NNC	ENSG00000161958.11	novel	2315	5	NA	NA	35	-5	intron_retention	FALSE	canonical	2	5	junction_1	40.7948798530186	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAAGTGCTGTCTGTCATC	7440030	True	NA	15	True	ATTAAA	-15	NA	7440807	7444932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_7440936_7441470_7441582_7441775_7441880_7442593
transcript_81930.known	chr17	+	1981	3	FSM	ENSG00000181284.3	ENST00000323206.2	1981	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	45	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCATTCCAGCCTCGCTAT	7434588	True	NA	NA	False	NA	NA	NA	7435434	7437679	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7435697_7435852_7436086_7436193
transcript_81931.known	chr17	+	1962	2	FSM	ENSG00000181284.3	ENST00000396568.1	1962	2	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	0	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAAAGTGCCTCTGTGGG	7434607	True	NA	26	True	ATTAAA	-17	NA	7435453	7437523	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7436086_7436193
transcript_81932.known	chr17	+	1095	2	FSM	ENSG00000170175.11	ENST00000575379.1	1095	2	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTTGTTCACTGCAGCA	7455564	True	NA	NA	False	NA	NA	NA	7455593	7457329	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7455942_7456582
transcript_81934.known	chr17	-	5956	4	FSM	ENSG00000174282.12	ENST00000311403.4	5956	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	18.8325958557674	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGATGCCAGGTGCAATT	-7484102	True	NA	-5	True	AATAAA	-30	NA	7484263	7459365	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7463891_7465710_7466811_7467256_7467328_7484003
transcript_81935.known	chr17	-	5860	4	FSM	ENSG00000174282.12	ENST00000380599.9	5860	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	6.59966329107444	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCTCCACAGTGGGATG	-7479320	True	NA	-17	True	AATAAA	-18	NA	7479631	7459377	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7463891_7465710_7466811_7467256_7467328_7479455
transcript_8194.nnic	chr1	+	2716	10	NNC	ENSG00000187147.18	novel	3042	15	NA	NA	-60	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	229.895682193812	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTGTGTTATGTGT	44402119	True	NA	NA	False	ATTAAA	-16	NA	44405133	44651723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_44405531_44411980_44412644_44636029_44636163_44644697_44644795_44644994_44645082_44645220_44645277_44645409_44645489_44649660_44649770_44649882_44649958_44650703
transcript_81942.known	chr17	+	2083	10	FSM	ENSG00000181222.19	ENST00000572844.1	2083	10	0	0	0	0	multi-exon	FALSE	canonical	1	231	junction_8	156.595570944731	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTTGTTCAAATTTTATT	7475358	False	NA	NA	False	GATAAA	-16	NA	7484619	7499758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7484858_7495940_7496074_7496209_7496347_7496439_7496614_7496763_7497046_7497355_7497518_7497649_7497871_7498077_7498211_7499038_7499164_7499280
transcript_81948.known	chr17	+	6751	29	FSM	ENSG00000181222.19	ENST00000617998.6	6751	29	0	0	0	0	multi-exon	TRUE	canonical	1	231	junction_8	139.105909585584	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTACATCGAGTGCTTC	7475104	True	NA	26	True	AATAAA	-22	NA	7484365	7514616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7484858_7495940_7496074_7496209_7496347_7496439_7496614_7496763_7497046_7497355_7497518_7497649_7497871_7498077_7498211_7499038_7499164_7499280_7499492_7500638_7500849_7500939_7501109_7501288_7501384_7501525_7501730_7501899_7502123_7502517_7502702_7503120_7503293_7503384_7503491_7503585_7503792_7508250_7508476_7508943_7509191_7509531_7509633_7511214_7511320_7511405_7511589_7511810_7512015_7512157_7512345_7512476_7512591_7512773_7512924_7513020
transcript_81949.known	chr17	+	1816	11	FSM	ENSG00000248871.1	ENST00000293826.4	1816	11	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_6	9.15914843203232	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGCTCCATTTCCCCCA	7548551	True	NA	10	True	AATAAA	-16	NA	7549098	7561601	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7549313_7549473_7549522_7550119_7550196_7550798_7550853_7550942_7550979_7556777_7556903_7559623_7559703_7559845_7559894_7560048_7560168_7560349_7560489_7560723
transcript_81950.known	chr17	+	1625	8	FSM	ENSG00000239697.11	ENST00000322272.11	1625	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	11.7212522838663	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTCTCTTTATTGGGGC	7548510	True	NA	NA	False	ATTAAA	-15	NA	7549057	7557890	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7549313_7549473_7549522_7550119_7550196_7550798_7550853_7550942_7550979_7553586_7553826_7556777_7556903_7557098
transcript_81951.known	chr17	+	1377	7	FSM	ENSG00000239697.11	ENST00000293825.11	1377	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	5.18544972870135	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCATAGTCTCTCTCTT	7548510	True	NA	NA	False	ATTAAA	-6	NA	7549057	7557881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7549313_7549473_7549522_7550119_7550196_7550798_7550853_7550942_7550979_7556777_7556903_7557098
transcript_81953.known	chr17	+	1811	6	FSM	ENSG00000161955.17	ENST00000338784.9	1811	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	3.65513337649941	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGCTCCATTTCCCCCA	7558735	False	NA	10	True	AATAAA	-16	NA	7558749	7561601	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7559298_7559623_7559703_7559845_7559894_7560048_7560168_7560349_7560489_7560723
transcript_81954.known	chr17	+	2036	5	FSM	ENSG00000161955.17	ENST00000349228.8	2036	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	6.80073525436772	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCGGCTCCATTTCCCCC	7558461	False	NA	9	True	AATAAA	-15	NA	7558475	7561600	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7559298_7559623_7559703_7560048_7560168_7560349_7560489_7560723
transcript_81966.known	chr17	-	2987	17	FSM	ENSG00000129245.12	ENST00000250113.12	2987	17	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_8	21.9237848865108	328	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGGCTCCTGTGCCTTC	-7613731	True	NA	-1	True	AATAAA	-15	NA	7614897	7591229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7591926_7592253_7592355_7592503_7592600_7592693_7592895_7592983_7593182_7593402_7593626_7593917_7594005_7594237_7594348_7594678_7594758_7595823_7595995_7601408_7601526_7602908_7603003_7603756_7603906_7604008_7604081_7605644_7605739_7606096_7606150_7614451
transcript_8197.nnic	chr1	+	2748	10	NNC	ENSG00000187147.18	novel	3042	15	NA	NA	-60	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	229.895682193812	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTGTGTTATGTGT	44402119	True	NA	NA	False	ATTAAA	-16	NA	44405133	44651723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_44405531_44411980_44412676_44636029_44636163_44644697_44644795_44644994_44645082_44645220_44645277_44645409_44645489_44649660_44649770_44649882_44649958_44650703
transcript_81984.nnic	chr17	+	2752	12	NNC	ENSG00000161956.13	novel	2222	12	NA	NA	-250	-7	intron_retention	TRUE	non_canonical	0	0	junction_11	158.838969342596	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTAAGTGGTGGTCTTCC	7561656	False	NA	7	True	AATAAA	-15	NA	7561668	7571962	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_7562264_7563065_7563792_7564624_7564865_7564958_7565071_7565439_7565588_7565716_7565765_7566926_7567005_7570355_7570494_7570680_7570765_7570882_7570934_7571372_7571851_7571908
transcript_81985.known	chr17	+	2222	12	FSM	ENSG00000161956.13	ENST00000429205.6	2222	12	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_11	158.838969342596	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGTCTTCCTTAAGGG	7562193	False	NA	14	True	AATAAA	-22	NA	7562225	7571969	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7562264_7563065_7563792_7564624_7564865_7564958_7565071_7565439_7565588_7565716_7565765_7566926_7567005_7570355_7570494_7570680_7570765_7570882_7570934_7571372_7571871_7571908
transcript_81992.known	chr17	+	2567	11	FSM	ENSG00000161956.13	ENST00000321337.12	2567	11	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_2	28.2851551171281	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGTCTTCCTTAAGGG	7557674	True	NA	14	True	AATAAA	-22	NA	7561918	7571969	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7562264_7563065_7563792_7564624_7564865_7564958_7565071_7565439_7565588_7565716_7565765_7566926_7567005_7570355_7570494_7570680_7570765_7570882_7570934_7571372
transcript_82.known	SIRV10003	+	9970	1	FSM	SIRV10003A	SIRV10003	9970	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	9970	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV10003_+_0_10000
transcript_8200.known	chr1	+	1200	10	FSM	ENSG00000187147.18	ENST00000440132.2	1200	10	0	0	0	0	multi-exon	FALSE	canonical	1	196	junction_6	132.865103779996	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGTGGCATGGGGGTCG	NA	False	NA	NA	False	NA	NA	NA	44631731	44649957	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_44632209_44632342_44632386_44635544_44635589_44636029_44636163_44644697_44644795_44644994_44645082_44645220_44645277_44645409_44645489_44649660_44649770_44649882
transcript_82004.known	chr17	+	1758	11	FSM	ENSG00000161960.16	ENST00000293831.13	1758	11	0	0	0	0	multi-exon	FALSE	canonical	3	10776	junction_1	1273.99711538135	2849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGGCTTCTCATTTCT	7340154	True	NA	27	True	AATAAA	-18	NA	7572824	7579006	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7572865_7574259_7574309_7574545_7574679_7575118_7575259_7576523_7576693_7577055_7577166_7577343_7577488_7577568_7577707_7577826_7577917_7578164_7578245_7578341
transcript_82007.known	chr17	+	1319	11	FSM	ENSG00000161960.16	ENST00000577269.5	1319	11	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_9	4294.18104066421	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTAGACACCCTTTTCT	7340166	True	NA	41	True	AATAAA	-35	NA	7572836	7578641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7572865_7574259_7574309_7574545_7574679_7575118_7575259_7576523_7576693_7577055_7577166_7577343_7577488_7577568_7577707_7577826_7577917_7578226_7578245_7578341
transcript_82024.known	chr17	+	3519	21	FSM	ENSG00000277957.1	ENST00000614237.1	3519	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	6751.60281044435	413	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTAATCCATTTCCCTAA	7563254	False	NA	31	True	NA	NA	NA	7563286	7578715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7563792_7564624_7564865_7564958_7565071_7565439_7565588_7565716_7565765_7566926_7567005_7570355_7570494_7570680_7570765_7570882_7570934_7571372_7571480_7572283_7572865_7574259_7574309_7574545_7574679_7575118_7575259_7576523_7576693_7577055_7577166_7577343_7577488_7577568_7577707_7577826_7577917_7578164_7578245_7578341
transcript_82060.known	chr17	+	577	6	FSM	ENSG00000161960.16	ENST00000585024.5	577	6	0	0	0	0	multi-exon	FALSE	canonical	1	31	junction_1	5655.13404262003	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTCAAGGACCAGATCT	7340157	True	NA	NA	False	AATACA	-44	NA	7572827	7577110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7572865_7574265_7574309_7574545_7574679_7575118_7575259_7576523_7576693_7577055
transcript_82067.known	chr17	-	974	6	FSM	ENSG00000141504.12	ENST00000380466.6	974	6	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_5	71.3845921750625	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGGTGTTGGGTCTTT	-7623723	True	NA	-5	True	AATAAA	-17	NA	7627869	7626236	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7626615_7626752_7626794_7626942_7627045_7627142_7627227_7627362_7627415_7627552
transcript_82068.known	chr17	-	912	6	FSM	ENSG00000141504.12	ENST00000269298.10	912	6	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_5	65.6396221805092	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTTGGGTCTTTCTT	-7623675	True	NA	-2	True	AATAAA	-20	NA	7627821	7626233	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7626615_7626752_7626794_7626942_7627045_7627142_7627227_7627362_7627415_7627569
transcript_82070.known	chr17	+	900	5	FSM	ENSG00000129255.16	ENST00000574558.1	900	5	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	178.353581405028	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGCAGAGTGGAGGGACTG	7579922	False	NA	NA	False	NA	NA	NA	7583894	7587938	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7583966_7586691_7586778_7586898_7587018_7587160_7587272_7587425
transcript_82077.known	chr17	-	582	5	FSM	ENSG00000141504.12	ENST00000576686.1	582	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	111.126898184013	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGGAGCCCAAGATCTGAC	-7623730	True	NA	NA	False	NA	NA	NA	7627876	7626533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7626615_7626752_7626794_7627142_7627227_7627362_7627415_7627552
transcript_82078.known	chr17	-	640	5	FSM	ENSG00000141504.12	ENST00000573566.1	640	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	108.544921576276	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGAGACTACGTCCACAG	-7623659	True	NA	NA	False	NA	NA	NA	7627805	7626387	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7626615_7626752_7626794_7627142_7627227_7627362_7627415_7627569
transcript_82082.known	chr17	+	782	4	FSM	ENSG00000161960.16	ENST00000584712.5	782	4	0	0	0	0	multi-exon	FALSE	canonical	3	10776	junction_1	1906.73758609365	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGATGTCAGAGCATGT	7340155	True	NA	NA	False	NA	NA	NA	7572825	7575679	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7572865_7574259_7574309_7574545_7574679_7575118
transcript_82090.known	chr17	+	716	3	FSM	ENSG00000161960.16	ENST00000584054.5	716	3	0	0	0	0	multi-exon	FALSE	canonical	3	10776	junction_1	2036.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATATCGATTCTGCAGCA	7340153	True	NA	NA	False	NA	NA	NA	7572823	7575171	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7572865_7574259_7574309_7574545
transcript_82093.known	chr17	-	1050	3	FSM	ENSG00000129194.8	ENST00000538513.6	1050	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	80	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTCTCCAGTCTTTATT	-7590055	False	NA	-5	True	ATTAAA	-19	NA	7590072	7588177	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7588547_7589143_7589739_7589986
transcript_82094.known	chr17	-	679	2	FSM	ENSG00000233223.4	ENST00000690435.1	1442	2	259	504	12	-497	multi-exon	FALSE	canonical	3	10	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGGTGGACAGGACAGGA	-7583501	False	199	NA	False	NA	NA	NA	7583518	7582471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7582532_7582899
transcript_82095.known	chr17	-	725	2	FSM	ENSG00000233223.4	ENST00000655859.2	745	2	12	8	12	-1	multi-exon	FALSE	canonical	3	12	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCGACTGCATTATCTC	-7584069	False	1646	-9	True	AATAAA	-16	NA	7584086	7581975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7582532_7583917
transcript_82096.known	chr17	-	287	2	FSM	ENSG00000233223.4	ENST00000572046.2	1058	2	732	39	520	-37	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTCGTCACATTTAATAA	-7581364	False	NA	-45	True	CATAAA	-35	NA	7583010	7582011	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7582164_7582875
transcript_82097.known	chr17	-	299	2	FSM	ENSG00000233223.4	ENST00000417897.2	371	2	30	42	4	-41	multi-exon	FALSE	canonical	2	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCAGTTCGTCACATTTA	-7584051	False	NA	-49	True	CATAAA	-31	NA	7584068	7582015	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7582164_7583917
transcript_82098.known	chr17	-	1320	2	FSM	ENSG00000129194.8	ENST00000250055.3	1320	2	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTCTCCAGTCTTTATT	-7588448	True	NA	-5	True	ATTAAA	-19	NA	7590094	7588177	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7588547_7589143
transcript_82099.known	chr17	-	1563	1	FSM	ENSG00000141504.12	ENST00000576846.1	1563	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTTGGGTCTTTCTT	-7623650	True	NA	-2	True	AATAAA	-20	NA	7627796	7626233	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7626200_7627800
transcript_82100.known	chr17	+	916	8	FSM	ENSG00000161960.16	ENST00000578495.5	916	8	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_4	4758.72789123912	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTTTGCCCGCTGCCAG	7340155	True	NA	NA	False	NA	NA	NA	7572825	7577706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7572865_7574259_7574309_7574545_7574679_7575118_7575259_7576529_7576693_7577055_7577166_7577343_7577488_7577568
transcript_82101.known	chr17	+	1645	10	FSM	ENSG00000161960.16	ENST00000582746.5	1645	10	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_9	4336.00741708172	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTGGAAACTGCCTGTT	7340171	True	NA	11	True	AATAAA	-2	NA	7572841	7578990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7572865_7574259_7574309_7574545_7574679_7575118_7575259_7576523_7576693_7577055_7577166_7577343_7577488_7577568_7577707_7577826_7577917_7578341
transcript_82102.known	chr17	+	1311	8	FSM	ENSG00000129214.15	ENST00000340624.9	1311	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.0303814862217	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGATTATTCATTTATTCA	7627865	False	NA	NA	False	ATTAAA	-30	NA	7627968	7633382	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7628152_7630415_7630508_7630679_7630870_7631199_7631362_7631588_7631749_7631878_7632016_7632751_7632960_7633203
transcript_82105.known	chr17	+	3341	7	FSM	ENSG00000129244.9	ENST00000250111.9	3341	7	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_5	19.437220880454	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGTGTGGGTTGTTC	7647020	True	NA	16	True	AATAAA	-41	NA	7650925	7657770	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7651631_7653373_7653503_7653840_7653946_7654051_7654258_7654627_7654685_7655526_7655626_7655730
transcript_82113.known	chr17	-	2653	12	FSM	ENSG00000141510.18	ENST00000420246.6	2653	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	120.923580813232	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACGCCAGTGCAGGCTAC	-7681535	True	NA	5	True	AATAAA	-30	NA	7687481	7668403	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7669691_7670608_7670716_7673206_7673340_7673534_7673609_7673700_7673838_7674180_7674291_7674858_7674972_7675052_7675237_7675993_7676273_7676381_7676404_7676520_7676623_7687376
transcript_82118.known	chr17	+	2657	11	FSM	ENSG00000141499.17	ENST00000498311.5	2657	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	79.8	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGAGTCTTCGTGTCTGT	7687515	False	NA	13	True	TATAAA	-15	NA	7687599	7703501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7688562_7688647_7689080_7689223_7689323_7689589_7689702_7700740_7700830_7701426_7701550_7701656_7701790_7702343_7702553_7702742_7702847_7702992_7703128_7703242
transcript_82120.known	chr17	+	1749	11	FSM	ENSG00000141499.17	ENST00000396463.7	1749	11	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_1	18.5280867873615	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGAGTCTTCGTGTCTGTT	7686478	True	NA	14	True	TATAAA	-16	NA	7688476	7703502	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7688562_7688647_7689080_7689223_7689323_7689589_7689702_7700740_7700830_7701458_7701550_7701656_7701790_7702343_7702553_7702742_7702847_7702992_7703128_7703242
transcript_82125.nic	chr17	-	2652	11	NIC	ENSG00000141510.18	novel	2512	11	NA	NA	-144	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_10	84.565714092651	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTGTCTGAGGGGTGA	-7671632	False	129	-12	True	AATAAA	-13	NA	7677578	7668420	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_7669691_7670608_7670716_7673534_7673609_7673700_7673838_7674180_7674291_7674858_7674972_7675052_7675237_7675993_7676273_7676381_7676404_7676520_7676623_7677324
transcript_82126.nnic	chr17	-	2619	11	NNC	ENSG00000141510.18	novel	2512	11	NA	NA	-184	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_10	88.5778753414192	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTGTCTGAGGGGTGA	-7671672	False	NA	-12	True	AATAAA	-13	NA	7677618	7668420	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_7669691_7670608_7670716_7673534_7673609_7673700_7673838_7674180_7674291_7674858_7674972_7675052_7675237_7675993_7676273_7676381_7676404_7676520_7676623_7677397
transcript_82127.known	chr17	-	2506	11	FSM	ENSG00000141510.18	ENST00000445888.6	2506	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	98.9664589646411	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTGTCTGAGGGGTGA	-7681541	True	NA	-12	True	AATAAA	-13	NA	7687487	7668420	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7669691_7670608_7670716_7673534_7673609_7673700_7673838_7674180_7674291_7674858_7674972_7675052_7675237_7675993_7676273_7676381_7676404_7676520_7676620_7687376
transcript_82133.known	chr17	+	4011	10	FSM	ENSG00000141499.17	ENST00000316024.9	4011	10	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_1	17.763883459299	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGAGTCTTCGTGTCTGTT	NA	False	NA	14	True	TATAAA	-16	NA	7686300	7703502	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7689080_7689223_7689323_7689589_7689702_7700740_7700830_7701458_7701550_7701656_7701790_7702343_7702553_7702742_7702847_7702992_7703128_7703242
transcript_82146.known	chr17	-	2639	10	FSM	ENSG00000141510.18	ENST00000610292.4	2639	10	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_9	47.1336424108468	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGCCAGTGCAGGCTACTG	-7681535	True	NA	7	True	AATAAA	-32	NA	7687481	7668401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7669691_7670608_7670716_7673534_7673609_7673700_7673838_7674180_7674291_7674858_7674972_7675052_7675237_7675993_7676273_7676381_7676623_7687376
transcript_82189.known	chr17	+	3216	5	FSM	ENSG00000108947.5	ENST00000226091.3	3216	5	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_2	2.23606797749979	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAAGGCTGGAGAATGAC	7704502	True	NA	11	True	AATAAA	-23	NA	7705201	7711372	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7705721_7707957_7708251_7708434_7708528_7708634_7708740_7709166
transcript_82191.known	chr17	+	6728	24	FSM	ENSG00000132510.11	ENST00000448097.7	6728	24	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	6.43977479675277	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTTCGCTAACGGCTG	7834133	True	NA	18	True	AATAAA	-14	NA	7834216	7854796	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7834351_7839905_7840025_7844900_7845021_7845313_7845457_7845549_7845692_7845871_7845971_7846077_7846298_7846399_7846493_7846578_7846741_7846818_7847017_7847104_7847453_7847545_7849729_7849820_7849948_7850071_7850178_7851020_7851227_7851329_7851395_7851477_7851550_7851647_7851797_7851950_7852066_7852148_7852337_7852494_7852637_7852999_7853127_7853209_7853381_7853497
transcript_82194.known	chr17	+	6713	22	FSM	ENSG00000132510.11	ENST00000254846.9	6713	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.38379467614053	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTTCGCTAACGGCTG	7839887	False	NA	18	True	AATAAA	-14	NA	7839903	7854796	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7840025_7844900_7845021_7845313_7845457_7845549_7845692_7845871_7845971_7846077_7846298_7846399_7846493_7846578_7846741_7846818_7847017_7847104_7847453_7847545_7849729_7849820_7849948_7850071_7850178_7851020_7851227_7851329_7851395_7851477_7851550_7851647_7851797_7851950_7852066_7852148_7852337_7852494_7852637_7852999_7853127_7853209
transcript_82198.nnic	chr17	-	2577	2	Antisense	novelGene_ENSG00000132510.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCACAGATTTTCAGGGGT	-7853773	False	NA	NA	False	AATAAA	-21	NA	7853786	7850457	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr17_-_7852515_7853266
transcript_82200.known	chr17	+	874	2	FSM	ENSG00000167874.7	ENST00000301599.7	874	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCGCTCTGCGAACAGAGGC	7854735	True	NA	5	True	AATAAA	-17	NA	7855065	7856099	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7855285_7855444
transcript_82201.known	chr17	+	510	2	FSM	ENSG00000167874.7	ENST00000574668.1	510	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTGTCCACGCATCAATA	7854735	True	NA	-33	True	GGGGCT	-23	NA	7855065	7856061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7855285_7855770
transcript_82203.known	chr17	+	3489	4	FSM	ENSG00000182224.12	ENST00000332439.5	3489	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	6.12825877028341	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAAGTGAACTCATCCGT	7857729	True	NA	11	True	AATAAA	-18	NA	7858002	7862282	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7858295_7858402_7858480_7858605_7858825_7859381
transcript_82204.known	chr17	+	1870	4	FSM	ENSG00000182224.12	ENST00000571846.5	1870	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	20.9496751499609	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAAACTTTGGAAAGTTTAA	7857512	True	NA	NA	False	NA	NA	NA	7857745	7860474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7858295_7858402_7858480_7858605_7858825_7859449
transcript_82206.nnic	chr17	-	629	4	NIC	ENSG00000183011.14	novel	556	5	NA	NA	-111	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_3	280.604506180654	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCTGTGTCTGTGTGTA	-7885333	False	NA	-4	True	ATTAAA	-13	NA	7885349	7856684	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_7856844_7857014_7857199_7883234_7883336_7885164
transcript_82209.known	chr17	+	597	3	FSM	ENSG00000182224.12	ENST00000573940.1	597	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	3.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGACGGTACACTTCAC	7858190	True	NA	NA	False	NA	NA	NA	7858282	7859544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7858295_7858402_7858825_7859381
transcript_82211.known	chr17	-	553	3	FSM	ENSG00000183011.14	ENST00000575071.5	553	3	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	132	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCTGTGTCTGTGTGTA	-7855408	True	NA	-4	True	ATTAAA	-13	NA	7857562	7856684	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7856844_7856984_7857199_7857382
transcript_82213.known	chr17	-	520	3	FSM	ENSG00000183011.14	ENST00000575771.6	520	3	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_2	125.5	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCTGTGTCTGTGTGTA	-7855405	True	NA	-4	True	ATTAAA	-13	NA	7857559	7856684	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7856844_7857014_7857199_7857382
transcript_82216.known	chr17	+	579	2	FSM	ENSG00000182224.12	ENST00000574357.1	579	2	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTTCGGACTGGGCCAA	7857729	True	NA	NA	False	NA	NA	NA	7858002	7858689	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7858295_7858402
transcript_82218.known	chr17	-	424	2	FSM	ENSG00000183011.14	ENST00000576384.1	424	2	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTATGACCGAATGGGCC	-7854888	True	NA	-18	True	NA	NA	NA	7857263	7856698	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7856844_7856984
transcript_82221.nic	chr17	+	3075	20	NIC	ENSG00000170037.14	novel	3996	19	NA	NA	-105	0	combination_of_known_junctions	TRUE	canonical	3	6	junction_1	36.7083285514548	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTCTCTGGCTCATAG	7931978	True	NA	23	True	AATAAA	-17	NA	7931995	7949578	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_7932139_7932927_7933350_7934137_7934223_7934464_7934547_7934988_7935146_7936365_7936483_7936700_7936818_7937163_7937263_7939512_7939750_7940095_7940243_7943390_7943525_7944122_7944249_7944475_7944639_7945727_7945987_7947570_7947723_7947915_7947980_7948156_7948328_7948486_7948620_7949084_7949158_7949384
transcript_82229.nic	chr17	+	3603	20	NIC	ENSG00000170037.14	novel	3996	19	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	36.1779228986845	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTCTCTGGCTCATAG	7929665	True	NA	23	True	AATAAA	-17	NA	7932129	7949578	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_7932801_7932927_7933350_7934137_7934223_7934464_7934547_7934988_7935146_7936365_7936483_7936700_7936818_7937163_7937263_7939512_7939750_7940095_7940243_7943390_7943525_7944122_7944249_7944475_7944639_7945727_7945987_7947570_7947723_7947915_7947980_7948156_7948328_7948486_7948620_7949084_7949158_7949384
transcript_82240.known	chr17	+	2783	19	FSM	ENSG00000170037.14	ENST00000565740.5	2783	19	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_17	26.7253982866532	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTCTCTGGCTCATAG	7933058	False	NA	23	True	AATAAA	-17	NA	7933079	7949578	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7933350_7934137_7934223_7934464_7934547_7934988_7935146_7936365_7936483_7936700_7936818_7937163_7937263_7939512_7939750_7940095_7940243_7943390_7943525_7944122_7944249_7944475_7944639_7945727_7945987_7947570_7947723_7947915_7947980_7948156_7948328_7948486_7948620_7949081_7949158_7949384
transcript_82242.known	chr17	+	3996	19	FSM	ENSG00000170037.14	ENST00000563694.6	3996	19	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_4	22.8687208881854	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAGTAAGTTATTGTATA	7929741	True	NA	NA	False	AAAACA	-43	NA	7932205	7949920	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7933350_7934137_7934223_7934464_7934547_7934988_7935146_7936365_7936483_7936700_7936818_7937163_7937263_7939512_7939750_7940095_7940243_7943390_7943525_7944122_7944249_7944475_7944639_7945727_7945987_7947570_7947723_7947915_7947980_7948156_7948328_7948486_7948620_7949084_7949158_7949384
transcript_82243.known	chr17	+	3769	19	FSM	ENSG00000170037.14	ENST00000380262.7	3769	19	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_17	37.6227620227732	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGAGTCTCTGGCTCAT	7929690	True	NA	21	True	AATAAA	-15	NA	7932154	7949576	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7933350_7934137_7934223_7934464_7934547_7934988_7935146_7936365_7936483_7936700_7936818_7937163_7937263_7939512_7939750_7940095_7940243_7943390_7943525_7944122_7944249_7944475_7944639_7945727_7945987_7947570_7947723_7947915_7947980_7948156_7948328_7948486_7948686_7949084_7949158_7949384
transcript_82252.known	chr17	-	2879	14	FSM	ENSG00000170049.10	ENST00000303790.3	2879	14	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_13	6.05692913385524	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTCCTTGTACTTCTCA	-7929833	False	12461	NA	False	TTTAAA	-16	NA	7929856	7921858	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7923180_7923455_7923545_7923710_7923832_7923967_7924063_7924144_7924266_7924414_7924501_7925096_7925184_7925682_7925727_7925930_7925976_7926058_7926104_7927343_7927424_7927656_7927695_7927782_7927827_7929193
transcript_82261.known	chr17	-	759	5	FSM	ENSG00000170043.12	ENST00000540486.5	759	5	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_4	465.898594116788	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGCGTGTTGGTTTGA	-7931976	False	NA	-3	True	AATAAA	-20	NA	7931999	7930344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7930735_7931010_7931150_7931505_7931577_7931730_7931830_7931939
transcript_82262.known	chr17	-	812	4	FSM	ENSG00000170043.12	ENST00000303731.9	812	4	0	0	0	0	multi-exon	FALSE	canonical	3	1188	junction_2	26.2339898266013	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGCCTGAGCGTGTTGGT	-7919485	True	NA	-7	True	AATAAA	-16	NA	7931946	7930348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7930735_7931010_7931150_7931505_7931577_7931730
transcript_82265.known	chr17	-	561	3	FSM	ENSG00000170043.12	ENST00000575639.1	561	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	604	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCCCAGAGCAACAGCCTA	-7919460	True	NA	NA	False	NA	NA	NA	7931921	7930503	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_7930735_7931010_7931150_7931730
transcript_82268.known	chr17	+	784	5	FSM	ENSG00000170037.14	ENST00000576538.5	784	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	48.5128848863887	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGATGCAAACGCTTCCT	7929636	True	NA	NA	False	GGGGCT	-38	NA	7932100	7935145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_7932139_7932927_7933350_7934137_7934223_7934464_7934547_7934988
transcript_82269.known	chr17	+	2697	14	FSM	ENSG00000179593.16	ENST00000380183.9	2697	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	2.09535976490404	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGCCTGGTGGTATGTGG	8039032	True	NA	NA	False	AATAAA	-15	NA	8039058	8049134	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_8039303_8039385_8039606_8039901_8039984_8042368_8042492_8042780_8042885_8044828_8045002_8045237_8045385_8045482_8045687_8046667_8046755_8046906_8047077_8047257_8047380_8047563_8047665_8047744_8047916_8048385
transcript_82271.known	chr17	+	2605	13	FSM	ENSG00000179593.16	ENST00000380173.6	2605	13	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_8	1.92930615046504	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAATTAAAAAA	8039013	True	NA	NA	False	NA	NA	NA	8039039	8049110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_8039303_8039385_8039606_8039901_8039984_8042368_8042492_8042780_8042885_8044828_8045002_8045237_8045385_8045482_8045687_8046906_8047077_8047257_8047380_8047563_8047665_8047744_8047916_8048385
transcript_82274.known	chr17	-	1221	8	FSM	ENSG00000179477.11	ENST00000649809.1	1221	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.16057691494799	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAACAAAACAAACAAGCA	-8079892	False	NA	NA	False	NA	NA	NA	8079903	8072719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8072951_8073147_8073319_8073656_8073758_8075594_8075717_8076174_8076345_8076656_8076744_8076989_8077194_8079768
transcript_82275.known	chr17	+	1804	2	FSM	ENSG00000214999.3	ENST00000399413.3	1804	2	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTTCTCATCATCCACC	8079236	True	NA	NA	False	AATAAA	-19	NA	8079481	8081565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_8079525_8079804
transcript_82278.known	chr17	-	1694	4	FSM	ENSG00000179111.9	ENST00000541682.7	1694	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	1.24721912892465	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTGTGTTTTTGTCTC	-8123873	True	NA	NA	False	AATAAA	-17	NA	8124106	8120591	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8122038_8122342_8122431_8123030_8123127_8124042
transcript_82282.known	chr17	-	4676	23	FSM	ENSG00000179094.16	ENST00000317276.9	4676	23	0	0	0	0	multi-exon	TRUE	canonical	3	64	junction_22	12.1638266053882	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGACTTTGTGGAATGAAG	-8150912	True	NA	-8	True	GATAAA	-7	NA	8152404	8140471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8141341_8141804_8141956_8142268_8142459_8142648_8142836_8143265_8143877_8144750_8144994_8145957_8146138_8146371_8146503_8146593_8146766_8146896_8147003_8147249_8147382_8147469_8147579_8147673_8147828_8147996_8148104_8148180_8148260_8148643_8148787_8149258_8149311_8149461_8149664_8149754_8149877_8149970_8150126_8150218_8150318_8150431_8150846_8152336
transcript_82289.known	chr17	-	2126	5	FSM	ENSG00000220205.9	ENST00000316509.11	2126	5	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_4	36.0104151600617	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTGTCTAAGATCTTTT	-8161626	True	NA	-2	True	AATAAA	-18	NA	8162948	8159148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8160872_8161472_8161525_8161607_8161767_8162248_8162370_8162877
transcript_82290.known	chr17	-	756	5	FSM	ENSG00000179029.15	ENST00000316425.9	756	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	19.536824204563	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTAAGACTTATATACAGT	-8175404	True	NA	-12	True	AATAAA	-17	NA	8176399	8174000	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8174273_8174519_8174617_8175756_8175876_8175958_8176027_8176199
transcript_82292.known	chr17	-	1210	2	FSM	ENSG00000179029.15	ENST00000449985.6	1210	2	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTCTTTGTTTTTTGTC	-8175378	True	NA	-25	True	AATACA	-3	NA	8176373	8173236	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8174273_8176199
transcript_82298.known	chr17	-	2358	3	FSM	ENSG00000179029.15	ENST00000532998.5	2358	3	0	0	0	0	multi-exon	TRUE	canonical	3	51	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATTTAAAAAAAT	-8175378	True	NA	NA	False	NA	NA	NA	8176373	8173741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8175858_8175958_8176027_8176199
transcript_82299.known	chr17	-	1836	1	FSM	ENSG00000196544.8	ENST00000389017.6	1836	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGAGGCTGAGTCTGTGT	-8189730	True	NA	-13	True	ATTAAA	-17	NA	8190180	8188344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8188300_8190200
transcript_82304.known	chr17	-	1243	9	FSM	ENSG00000178999.13	ENST00000585124.6	1243	9	0	0	0	0	multi-exon	TRUE	canonical	3	770	junction_8	125.652298029125	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGTAGATGTTTCTAGG	-8190797	True	NA	-8	True	AATAAA	-22	NA	8210575	8204733	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8205045_8205215_8205391_8206490_8206640_8206749_8206889_8207175_8207368_8207570_8207626_8207737_8207841_8210176_8210250_8210529
transcript_82307.nnic	chr17	-	1153	9	NIC	ENSG00000178999.13	novel	1243	9	NA	NA	-36	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	353.28102747671	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTACTCATGAGTGTAGAT	-8190858	True	NA	-17	True	AATAAA	-13	NA	8210636	8204742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_8205045_8205215_8205391_8206490_8206640_8206749_8206889_8207317_8207368_8207570_8207626_8207737_8207841_8210176_8210250_8210529
transcript_82308.nic	chr17	-	1199	9	NIC	ENSG00000178999.13	novel	1243	9	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	353.28102747671	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTACTCATGAGTGTAGAT	-8190858	True	NA	-17	True	AATAAA	-13	NA	8210636	8204742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_8205045_8205215_8205391_8206490_8206640_8206749_8206935_8207317_8207368_8207570_8207626_8207737_8207841_8210176_8210250_8210529
transcript_82311.known	chr17	-	1167	8	FSM	ENSG00000178999.13	ENST00000534871.5	1167	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_7	370.090667324666	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTACTCATGAGTGTAGAT	-8190803	True	NA	-17	True	AATAAA	-13	NA	8210581	8204742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8205045_8205215_8205391_8206490_8206640_8206749_8206889_8207175_8207368_8207570_8207626_8207737_8207841_8210529
transcript_8232.known	chr1	+	3099	15	FSM	ENSG00000187147.18	ENST00000355387.6	3099	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	220.655251004635	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTGTGTTATGTGT	44402179	True	NA	NA	False	ATTAAA	-16	NA	44405193	44651723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_44405527_44411980_44412723_44614164_44614298_44622741_44622788_44626296_44626399_44632342_44632386_44635544_44635589_44636029_44636163_44644697_44644795_44644994_44645082_44645220_44645277_44645409_44645489_44649660_44649770_44649882_44649958_44650703
transcript_82329.known	chr17	+	5369	28	FSM	ENSG00000178921.14	ENST00000314666.11	5369	28	0	0	0	0	multi-exon	FALSE	canonical	3	380	junction_1	58.0448953530214	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCATTGCCTGGGGTCCAC	8234527	True	NA	14	True	AATAAA	-18	NA	8249288	8270486	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_8249340_8253858_8254080_8254165_8254302_8255026_8255133_8255501_8255692_8255804_8255911_8256266_8256408_8256523_8256649_8256834_8256964_8257806_8257939_8258070_8258200_8262919_8262994_8263108_8263266_8263574_8263637_8263774_8263937_8264211_8264338_8264469_8264602_8264894_8265126_8265287_8265469_8265555_8265640_8265861_8266018_8266233_8266354_8266752_8266899_8267027_8267236_8267371_8267464_8267550_8267666_8268532_8268857_8268953
transcript_8233.known	chr1	+	2734	10	FSM	ENSG00000187147.18	ENST00000474064.5	2734	10	0	0	0	0	multi-exon	FALSE	canonical	1	179	junction_1	153.189143153968	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTGTGTTATGTGT	44625260	True	NA	NA	False	ATTAAA	-16	NA	44631967	44651723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_44632213_44632342_44632386_44635544_44635589_44636029_44636163_44644697_44644795_44644994_44645082_44645220_44645277_44645409_44645489_44649660_44649770_44649882
transcript_82334.nic	chr17	+	5498	27	ISM	ENSG00000178921.14	ENST00000314666.11	5369	28	-27	-5	-24	0	intron_retention	FALSE	canonical	3	380	junction_1	56.4478604266412	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTGGGGTCCACAGATG	8234500	True	NA	19	True	AATAAA	-23	NA	8249261	8270491	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_8249340_8253858_8254080_8254165_8254302_8255026_8255133_8255501_8255692_8255804_8255911_8256266_8256408_8256523_8256649_8256834_8256964_8257806_8257939_8258070_8258200_8262919_8262994_8263108_8263266_8263574_8263637_8263774_8263937_8264211_8264338_8264469_8264602_8264894_8265126_8265287_8265469_8265555_8265640_8265861_8266018_8266233_8266354_8266752_8266899_8267027_8267236_8267371_8267464_8267550_8267666_8268532
transcript_8234.known	chr1	+	860	4	FSM	ENSG00000187147.18	ENST00000488865.2	860	4	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	159.403750130151	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATCCCTCTTAAGGCTG	44625276	True	NA	19	True	ATTAAA	-22	NA	44631983	44636495	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_44632213_44632342_44632386_44635544_44635667_44636029
transcript_8235.known	chr1	-	1579	4	FSM	ENSG00000126106.14	ENST00000372243.7	1579	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	48.0578355271599	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATGTTGCTAGGTATCT	-44673265	True	NA	-1	True	AATAAA	-20	NA	44674462	44635237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_44636458_44645359_44645465_44660173_44660296_44674330
transcript_82358.known	chr17	-	7039	23	FSM	ENSG00000178971.16	ENST00000651323.1	7039	23	0	0	0	0	multi-exon	TRUE	canonical	3	82	junction_4	17.5854466501223	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAGTTCTTGGTTATTAA	-8245676	True	NA	0	True	AATAAA	-22	NA	8248056	8224814	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8228320_8228502_8228630_8228726_8228893_8229141_8229207_8229301_8229447_8229890_8229969_8230293_8230469_8230562_8230652_8231275_8231470_8231725_8231816_8231902_8232228_8232360_8232476_8232905_8233033_8234454_8234656_8234748_8234927_8235052_8235286_8235830_8235960_8236057_8236343_8237374_8237520_8238030_8238243_8238391_8238630_8242984_8243149_8248003
transcript_8236.known	chr1	-	1472	3	FSM	ENSG00000126106.14	ENST00000372244.3	1472	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	3.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATGTTGCTAGGTATCT	-44673280	True	NA	-1	True	AATAAA	-20	NA	44674477	44635237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_44636458_44645359_44645465_44674330
transcript_8237.known	chr1	-	2236	3	FSM	ENSG00000126106.14	ENST00000372237.8	2236	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	26	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACCGTGGTGATCACGGG	-44673284	True	NA	NA	False	AATAAA	-17	NA	44674481	44653246	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_44655210_44660173_44660296_44674330
transcript_8238.known	chr1	-	415	3	FSM	ENSG00000126106.14	ENST00000420706.1	415	3	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	55	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCATGCTGCGCCTGTTGC	-44674369	False	NA	NA	False	GGGGCT	-36	NA	44674402	44654895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_44655117_44660173_44660296_44674330
transcript_82397.known	chr17	-	2136	7	FSM	ENSG00000125434.11	ENST00000579192.5	2136	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	8.21414768690107	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATTTGTTGTGTTCTTTA	-8294899	True	NA	-1	True	ATTAAA	-22	NA	8295343	8287762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8288433_8289573_8289644_8289853_8289985_8290841_8290977_8291332_8291486_8292522_8292589_8294432
transcript_82399.known	chr17	+	831	5	FSM	ENSG00000108961.14	ENST00000226105.11	831	5	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_4	72.6476943887416	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAATCTCTGTGCCTTTGA	8286735	True	NA	NA	False	AATAAA	-17	NA	8288669	8290087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_8288866_8288955_8289073_8289257_8289415_8289502_8289589_8289812
transcript_82401.known	chr17	-	1940	5	FSM	ENSG00000125434.11	ENST00000577745.2	1940	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	2.77263412660235	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGATTGTCTTATGTTTA	-8294956	True	NA	2	True	TATAAA	-17	NA	8295400	8290060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8290679_8290841_8290977_8291332_8291486_8292522_8292589_8294432
transcript_82403.known	chr17	+	1074	4	FSM	ENSG00000108961.14	ENST00000407006.8	1074	4	0	0	0	0	multi-exon	FALSE	canonical	3	431	junction_3	19.8662192343351	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCTGTGCCTTTGAATC	8286719	True	NA	NA	False	AATAAA	-20	NA	8288653	8290090	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_8288866_8288955_8289073_8289257_8289415_8289502
transcript_82404.known	chr17	+	749	4	FSM	ENSG00000108961.14	ENST00000580434.5	749	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	197.053856146542	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTGCCTTTGAATCTA	8286736	True	NA	NA	False	AATAAA	-22	NA	8288670	8290092	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_8288866_8288955_8289073_8289257_8289415_8289812
transcript_82407.known	chr17	+	1140	3	FSM	ENSG00000108961.14	ENST00000439238.3	1140	3	0	0	0	0	multi-exon	FALSE	canonical	3	471	junction_2	2	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTGCCTTTGAATCTA	8286743	True	NA	NA	False	AATAAA	-22	NA	8288677	8290092	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_8288866_8288955_8289073_8289257
transcript_82409.known	chr17	+	607	2	FSM	ENSG00000108961.14	ENST00000578849.1	607	2	0	0	0	0	multi-exon	FALSE	canonical	3	475	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTAAGGAAAACCAGCAGG	8286764	True	NA	NA	False	NA	NA	NA	8288698	8289395	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_8288866_8288955
transcript_82411.known	chr17	+	4138	16	FSM	ENSG00000198844.12	ENST00000421050.2	4138	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.25832517937902	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTCTCTGAGGAAGTGTG	8310811	True	NA	20	True	AGTAAA	-20	NA	8310821	8322514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_8310864_8311990_8312641_8312921_8313255_8313500_8313556_8314905_8314965_8315065_8315278_8315413_8315575_8315754_8315908_8316018_8316149_8318386_8318462_8318569_8318663_8318749_8318911_8319006_8319160_8319311_8319395_8319498_8319604_8320841
transcript_8242.known	chr1	-	2075	2	FSM	ENSG00000126106.14	ENST00000476724.1	2075	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACCGTGGTGATCACGGG	-44673245	True	NA	NA	False	AATAAA	-17	NA	44674442	44653246	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_44655210_44674330
transcript_82425.known	chr17	-	563	4	FSM	ENSG00000161970.15	ENST00000584343.6	563	4	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_3	6373.85688226176	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTAAAACTGGACAAAGACC	-8382963	False	NA	-68	True	NA	NA	NA	8383009	8377678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8377693_8379795_8379937_8382142_8382316_8382774
transcript_82426.known	chr17	-	763	4	FSM	ENSG00000161970.15	ENST00000582556.5	763	4	0	0	0	0	multi-exon	FALSE	canonical	3	639	junction_3	6195.7682511713	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTTTGATTAAAACTTGA	-8221707	True	NA	62	True	AATAAA	-15	NA	8383166	8377548	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8377693_8379795_8379937_8382142_8382316_8382861
transcript_82427.known	chr17	-	528	4	FSM	ENSG00000161970.15	ENST00000648839.1	528	4	0	0	0	0	multi-exon	FALSE	canonical	3	9272	junction_3	2286.31406416529	2230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTGTGGTGATTT	-8221734	True	NA	95	True	ATTAAA	-20	NA	8383193	8377515	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8377693_8379795_8379937_8382142_8382316_8383156
transcript_82430.known	chr17	-	3209	3	FSM	ENSG00000184619.8	ENST00000643221.1	3209	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGAGACCATGCCACTGC	-8376612	False	161459	NA	False	NA	NA	NA	8376658	8368709	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8370387_8371308_8372082_8375899
transcript_82434.known	chr17	-	1002	3	FSM	ENSG00000161970.15	ENST00000578812.5	1002	3	0	0	0	0	multi-exon	FALSE	canonical	3	9272	junction_2	2796	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTCTATATGTTCTAGT	-8221734	True	NA	NA	False	AATAAA	-38	NA	8383193	8379144	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8379937_8382142_8382316_8383156
transcript_82435.known	chr17	-	12370	2	FSM	ENSG00000184619.8	ENST00000396267.3	12370	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCATTATGTCGGCGACTT	-8376658	False	161459	NA	False	GATAAA	-1	NA	8376704	8358821	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8370387_8375899
transcript_82438.known	chr17	-	7694	42	FSM	ENSG00000133026.14	ENST00000379980.8	7694	42	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_36	252.555342590077	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTTTTCTCACCTTCT	-8611398	True	NA	-2	True	AATAAA	-38	NA	8630761	8474206	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8475949_8476875_8477049_8478337_8478447_8480109_8480319_8480401_8480526_8481321_8481411_8484137_8484267_8487432_8487595_8490339_8490553_8492296_8492510_8492775_8493025_8493732_8493886_8495136_8495242_8499269_8499477_8500825_8500971_8504693_8504907_8506317_8506490_8508553_8508678_8509811_8509950_8512450_8512658_8513537_8513670_8513785_8513895_8518630_8518792_8518880_8518951_8520877_8521000_8521091_8521286_8535386_8535502_8535757_8535932_8542106_8542281_8545447_8545601_8546543_8546663_8548312_8548409_8548643_8548788_8552045_8552145_8553954_8554019_8569719_8569813_8576642_8576670_8577235_8577339_8589080_8589109_8604825_8604983_8622901_8623278_8630653
transcript_82442.known	chr17	-	7662	41	FSM	ENSG00000133026.14	ENST00000269243.8	7662	41	0	0	0	0	multi-exon	FALSE	canonical	3	658	junction_36	158.909012881586	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGAATCTGTTTTCTCAC	-8611398	True	NA	-7	True	AATAAA	-33	NA	8630761	8474211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8475949_8476875_8477049_8478337_8478447_8480109_8480319_8480401_8480526_8481321_8481411_8484137_8484267_8487432_8487595_8490339_8490553_8492296_8492510_8492775_8493025_8493732_8493886_8495136_8495242_8499269_8499477_8500825_8500971_8504693_8504907_8506317_8506490_8508553_8508678_8509811_8509950_8512450_8512658_8513537_8513670_8513785_8513895_8518630_8518792_8518880_8518951_8520877_8521000_8521091_8521286_8535386_8535502_8535757_8535932_8542106_8542281_8545447_8545601_8546543_8546663_8548312_8548409_8548643_8548788_8552045_8552145_8553954_8554019_8569719_8569813_8577235_8577339_8589080_8589109_8604825_8604983_8622901_8623278_8630653
transcript_8245.known	chr1	+	2862	21	FSM	ENSG00000142945.13	ENST00000372224.9	2862	21	0	0	0	0	multi-exon	FALSE	canonical	3	405	junction_3	56.9706942208009	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCTGGGATGTGTCTGAG	44735394	True	NA	29	True	AATAAA	-37	NA	44739836	44767767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_44740003_44740912_44741008_44747383_44747486_44747651_44747701_44750441_44750565_44753131_44753255_44753732_44753834_44754749_44754846_44755928_44755984_44756074_44756238_44757555_44757647_44757907_44757972_44758048_44758141_44759205_44759349_44760279_44760485_44760591_44760703_44761915_44761984_44762345_44762452_44762544_44762659_44766825_44766950_44767096
transcript_82463.nic	chr17	-	3114	23	ISM	ENSG00000133026.14	ENST00000465458.2	4236	26	-43	6864	1	-6864	5prime_fragment	FALSE	canonical	0	0	junction_17	244.72019779048	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAGCACATATTCAGGTA	-8629422	False	NA	46	True	AAGAAA	-34	NA	8630864	8512467	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_8512658_8513537_8513670_8513785_8513895_8518630_8518792_8518880_8518951_8520877_8521000_8521091_8521286_8535386_8535502_8535757_8535932_8542106_8542281_8545447_8545601_8546543_8546663_8548312_8548409_8548643_8548788_8552045_8552145_8553954_8554019_8569719_8569813_8576642_8576673_8577235_8577339_8589080_8589109_8604825_8604983_8622901_8623278_8630653
transcript_82474.nic	chr17	-	3141	22	ISM	ENSG00000133026.14	ENST00000269243.8	7662	41	-160	38256	-56	-6864	5prime_fragment	FALSE	canonical	3	658	junction_17	83.9451824156315	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAGCACATATTCAGGTA	-8629479	False	NA	46	True	AAGAAA	-34	NA	8630921	8512467	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_8512658_8513537_8513670_8513785_8513895_8518630_8518792_8518880_8518951_8520877_8521000_8521091_8521286_8535386_8535502_8535757_8535932_8542106_8542281_8545447_8545601_8546543_8546663_8548312_8548409_8548643_8548788_8552045_8552145_8553954_8554019_8569719_8569813_8577235_8577339_8589080_8589109_8604825_8604983_8622901_8623278_8630653
transcript_82475.nnic	chr17	-	3329	22	NIC	ENSG00000133026.14	novel	8100	43	NA	NA	0	-6864	combination_of_known_junctions	FALSE	canonical	3	40	junction_21	188.915174908364	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAGCACATATTCAGGTA	-8629934	False	NA	46	True	AAGAAA	-34	NA	8631376	8512467	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_8512658_8513537_8513670_8513785_8513895_8518630_8518792_8518880_8518951_8520877_8521000_8521091_8521286_8535386_8535502_8535757_8535932_8542106_8542281_8545447_8545601_8546543_8546663_8548312_8548409_8548643_8548788_8552045_8552145_8553954_8554019_8569719_8569813_8577235_8577339_8589080_8589109_8604825_8604983_8622901_8623278_8630920
transcript_82490.nic	chr17	-	2643	19	ISM	ENSG00000133026.14	ENST00000269243.8	7662	41	-160	44486	-56	2144	5prime_fragment	FALSE	canonical	3	658	junction_14	83.2542773156913	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGATTTAAAAATCACCGAT	-8629479	False	NA	NA	False	AAGAAA	-1	NA	8630921	8518697	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_8518792_8518880_8518951_8520877_8521000_8521091_8521286_8535386_8535502_8535757_8535932_8542106_8542281_8545447_8545601_8546543_8546663_8548312_8548409_8548643_8548788_8552045_8552145_8553954_8554019_8569719_8569813_8577235_8577339_8589080_8589109_8604825_8604983_8622901_8623278_8630653
transcript_82506.known	chr17	+	1858	10	FSM	ENSG00000166579.16	ENST00000402554.7	1858	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	94.3713442591762	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACGGGGCACACACAGGCC	8431569	True	NA	NA	False	NA	NA	NA	8435907	8467658	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_8436046_8444259_8444358_8445710_8445865_8446753_8446903_8448549_8448687_8450779_8450954_8454795_8454888_8460008_8460161_8463319_8463355_8466929
transcript_82507.known	chr17	+	2352	9	FSM	ENSG00000166579.16	ENST00000334527.12	2352	9	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_4	22.4220873247787	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACGTTGCTTTATTCAGT	8431545	True	NA	19	True	AATAAA	-19	NA	8435883	8468163	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_8436046_8444259_8444358_8445710_8445865_8446753_8446903_8448549_8448687_8450779_8450954_8454795_8454888_8460008_8460161_8466929
transcript_82515.known	chr17	-	2256	1	FSM	ENSG00000185156.6	ENST00000329805.6	2256	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCTATAGTCACTATATG	NA	False	NA	49	True	AATACA	-19	NA	8799365	8797109	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8797100_8799400
transcript_82517.nic	chr17	-	4523	19	NIC	ENSG00000141506.15	novel	4491	19	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_7	7.39222982112942	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTAATGACCAGTAGTT	-8965420	True	NA	-9	True	AATAAA	-15	NA	8965745	8878918	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_8880787_8880904_8881018_8881629_8881713_8881787_8881882_8884706_8884784_8886228_8886323_8886476_8886603_8887095_8887222_8887520_8887684_8888170_8888892_8889138_8889223_8889972_8890127_8890737_8890913_8893585_8893656_8904776_8904916_8905668_8905738_8909073_8909175_8911391_8911508_8965595
transcript_82518.known	chr17	-	4491	19	FSM	ENSG00000141506.15	ENST00000447110.6	4491	19	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_7	7.0858927837789	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATGACCAGTAGTTACT	-8965382	True	NA	-6	True	AATAAA	-18	NA	8965707	8878915	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8880787_8880904_8881018_8881629_8881713_8881787_8881882_8884706_8884784_8886228_8886323_8886476_8886606_8887095_8887222_8887520_8887684_8888170_8888892_8889138_8889223_8889972_8890127_8890737_8890913_8893585_8893656_8904776_8904916_8905668_8905738_8909073_8909175_8911391_8911508_8965595
transcript_82519.known	chr17	-	680	6	FSM	ENSG00000141506.15	ENST00000578743.5	680	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	11.9766439372639	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGGGCCCAGCGCCAGA	-8885070	False	NA	NA	False	NA	NA	NA	8885086	8880640	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8880787_8880904_8881018_8881629_8881713_8881787_8881882_8884706_8884784_8884919
transcript_82520.known	chr17	-	4377	18	FSM	ENSG00000141506.15	ENST00000616147.4	4377	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	8.75779435347258	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTAATGACCAGTAGTT	-8965387	True	NA	-9	True	AATAAA	-15	NA	8965712	8878918	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_8880787_8880904_8881018_8881629_8881713_8881787_8881882_8884706_8884784_8886228_8886323_8886476_8886606_8887095_8887222_8887520_8887684_8888170_8888892_8889138_8889223_8889972_8890127_8890737_8890913_8893585_8893656_8904776_8904916_8905668_8905738_8909073_8909175_8965595
transcript_82523.known	chr17	-	830	8	FSM	ENSG00000170310.15	ENST00000306357.9	830	8	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_7	46.3645712736326	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGTGCATTGCTTCAG	-9571083	True	NA	-1	True	AATAAA	-18	NA	9575820	9250470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_9250646_9378551_9378654_9491828_9491922_9505037_9505163_9545171_9545283_9557433_9557529_9568370_9568471_9575791
transcript_82524.known	chr17	-	731	7	FSM	ENSG00000170310.15	ENST00000574431.5	731	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	190.720927593755	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCCAAAGCTCTGACCTC	-9571100	True	NA	-17	True	AATAAA	-2	NA	9575837	9250486	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_9250646_9378551_9378654_9491828_9491922_9505037_9505163_9545171_9545283_9557433_9557529_9575791
transcript_82526.known	chr17	-	638	6	FSM	ENSG00000170310.15	ENST00000575858.5	638	6	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_4	173.097198128681	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTTGTGCATTGCTTCA	-9571098	True	NA	-2	True	AATAAA	-17	NA	9575835	9250471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_9250646_9378551_9378654_9491828_9491922_9505037_9505163_9568370_9568471_9575791
transcript_82528.known	chr17	+	3500	15	FSM	ENSG00000154914.17	ENST00000570475.5	3500	15	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_12	8.47234396403368	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAACTGTAGGCAGCTCA	9644921	True	NA	NA	False	NA	NA	NA	9645536	9729037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_9646137_9656402_9656535_9666647_9666752_9674890_9674984_9676745_9676882_9680230_9680367_9682822_9682959_9686797_9686910_9693126_9693231_9700171_9700250_9701118_9701246_9701351_9701686_9709955_9710115_9711967_9712133_9727953
transcript_82532.nnic	chr17	+	4887	14	NIC	ENSG00000154914.17	novel	4185	15	NA	NA	24	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_3	7.23894791139606	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGCATGGCTGTCTGAATT	9644630	True	NA	6	True	AATAAA	-16	NA	9644721	9729687	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_9646137_9656402_9656535_9666647_9666752_9676745_9676882_9680230_9680367_9682822_9682959_9686797_9686910_9693126_9693231_9700171_9700250_9701118_9701246_9701351_9701701_9709955_9710115_9711967_9712133_9727953
transcript_82538.known	chr17	-	8269	14	FSM	ENSG00000007237.19	ENST00000432992.7	8269	14	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_9	3.92232270276368	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCATCTCGTTTTTTTTTT	-10198258	False	348	45	True	TATAAA	-20	NA	10198606	9910605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_9917342_9918000_9918100_9919625_9919706_9925475_9925600_9926640_9926770_9934165_9934245_9940125_9940201_9943120_9943237_9946893_9946984_9959201_9959256_9969676_9969763_9981803_9981885_10019776_10019898_10198207
transcript_8254.known	chr1	+	685	6	FSM	ENSG00000142937.12	ENST00000372209.3	685	6	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_3	4948.02006463191	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTTGCCCTGCAAAACT	44759519	True	NA	52	True	AATATA	-21	NA	44775572	44778779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_44775601_44776033_44776141_44776674_44776715_44777613_44777790_44777999_44778130_44778575
transcript_82549.known	chr17	-	6078	40	FSM	ENSG00000125414.19	ENST00000397183.6	6078	40	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_38	3.0852451559939	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAATATCCTTAGACTGG	-10549505	True	NA	-7	True	AATAAA	-17	NA	10549623	10521155	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_10521433_10523089_10523186_10523307_10523413_10523495_10523667_10523758_10523885_10524465_10524670_10524756_10525066_10525223_10525349_10525450_10525617_10525692_10525877_10526598_10526796_10526937_10527057_10527747_10527875_10528689_10529080_10529161_10529253_10529335_10529482_10529563_10529741_10529831_10530075_10531632_10531889_10533284_10533422_10533508_10533633_10535072_10535191_10535277_10535366_10536529_10536607_10537232_10537543_10537664_10537836_10539204_10539355_10539443_10539563_10539927_10540067_10540593_10540698_10542874_10542974_10543097_10543162_10543710_10543804_10543901_10544017_10544099_10544128_10545345_10545503_10547474_10547619_10547716_10547941_10549374_10549418_10549558
transcript_8255.known	chr1	+	778	6	FSM	ENSG00000142937.12	ENST00000396651.8	778	6	0	0	0	0	multi-exon	FALSE	canonical	3	8257	junction_1	1976.66988645044	1954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTTGCCCTGCAAAACT	44759486	True	NA	52	True	AATATA	-21	NA	44775539	44778779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_44775601_44776033_44776141_44776674_44776775_44777613_44777790_44777999_44778130_44778575
transcript_82550.nic	chr17	-	2775	22	ISM	ENSG00000125414.19	ENST00000397183.6	6078	40	-21	10548	14	-10548	5prime_fragment	FALSE	canonical	0	0	junction_20	2.73135817137143	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGGAACTGGAAGAAAAG	-10549526	True	NA	NA	False	ATTAAA	-29	NA	10549644	10531703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_10531889_10533284_10533422_10533508_10533633_10535072_10535191_10535277_10535366_10536529_10536607_10537232_10537543_10537664_10537836_10539204_10539355_10539443_10539563_10539927_10540067_10540593_10540698_10542874_10542974_10543097_10543162_10543710_10543804_10543901_10544017_10544099_10544128_10545345_10545503_10547474_10547619_10547716_10547941_10549374_10549418_10549558
transcript_82553.known	chr17	-	9577	6	FSM	ENSG00000133028.12	ENST00000255390.10	9577	6	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_3	28.5685141370706	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCTTTTTTTTTTGTA	-10688738	True	NA	NA	False	AATAAA	-17	NA	10697533	10672473	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_10681254_10686726_10686843_10691871_10691965_10692763_10692962_10695740_10695832_10697234
transcript_82558.known	chr17	-	2813	6	FSM	ENSG00000187824.9	ENST00000341871.8	2813	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	7.95989949685296	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAATCTTTTTTTTTTTT	-10729637	True	NA	NA	False	ATTAAA	-17	NA	10730023	10713294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_10715589_10723269_10723330_10725010_10725135_10726203_10726265_10729030_10729061_10729779
transcript_82562.known	chr17	-	1402	5	FSM	ENSG00000187824.9	ENST00000455996.6	1402	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	13.6450540489952	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGCTGGGATTACAGGT	-10729637	True	NA	NA	False	NA	NA	NA	10730023	10714675	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_10715589_10723269_10723330_10725010_10725135_10726203_10726265_10729779
transcript_82563.known	chr17	+	1534	4	FSM	ENSG00000170222.12	ENST00000379774.5	1534	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	2.94392028877595	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTATACTTGGATTTTT	10696853	True	NA	NA	False	NA	NA	NA	10697593	10711558	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_10697668_10704909_10705528_10706437_10706555_10710833
transcript_82564.known	chr17	+	1277	4	FSM	ENSG00000170222.12	ENST00000468843.1	1277	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	5.71547606649408	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAGCTTGCATAACAAAAT	10696873	True	NA	21	True	AATAAA	-25	NA	10697613	10711233	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_10697668_10704909_10705616_10706437_10706555_10710833
transcript_82569.known	chr17	+	1138	3	FSM	ENSG00000170222.12	ENST00000609540.1	1138	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	8	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTCAGCTTGCATAACAA	10704885	False	NA	18	True	AATAAA	-22	NA	10704899	10711230	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_10705528_10706437_10706551_10710833
transcript_82570.known	chr17	-	559	4	FSM	ENSG00000187824.9	ENST00000578345.1	559	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	18.9795211273157	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTCAATCAATTTTTTA	-10729600	True	NA	NA	False	AATAAA	-27	NA	10729986	10715421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_10715589_10725010_10725135_10726203_10726265_10729779
transcript_82571.known	chr17	+	1986	4	FSM	ENSG00000007174.18	ENST00000579828.5	1986	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTACTTTGCCCAGAACT	NA	False	NA	NA	False	ATTAAA	-17	NA	11598469	11612833	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_11598916_11608128_11608326_11610395_11610555_11611649
transcript_82573.known	chr17	-	2261	7	FSM	ENSG00000154957.14	ENST00000454073.7	2261	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	35.0780874937934	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTATCTTATTTGTTT	-11996654	True	NA	-14	True	AATAAA	-13	NA	11997457	11977451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_11978745_11983296_11983405_11984112_11984198_11990461_11990551_11990973_11991164_11992442_11992912_11997430
transcript_82575.known	chr17	-	2295	7	FSM	ENSG00000154957.14	ENST00000580306.7	2295	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	33.6633661748528	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTTCACTGTGTGT	-11996672	True	NA	-1	True	AATAAA	-26	NA	11997475	11977438	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_11978745_11983296_11983408_11984112_11984198_11990461_11990551_11990973_11991164_11992442_11992912_11997430
transcript_82582.known	chr17	+	3856	12	FSM	ENSG00000065559.15	ENST00000415385.7	3856	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	92.6840362657583	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCCTTTTGGAAGTGTTT	12016289	True	NA	41	True	ATTAAA	-31	NA	12020833	12143830	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_12021002_12032265_12032299_12054888_12054992_12081355_12081531_12095574_12095695_12107789_12107910_12110374_12110427_12113232_12113361_12125293_12125372_12129138_12129288_12139838_12139885_12141146
transcript_82583.known	chr17	+	3778	11	FSM	ENSG00000065559.15	ENST00000353533.10	3778	11	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_10	17.1172427686237	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTCCTTTTGGAAGTGT	12016332	True	NA	39	True	ATTAAA	-29	NA	12020876	12143828	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_12021002_12054888_12054992_12081355_12081531_12095574_12095695_12107789_12107910_12110374_12110427_12113232_12113361_12125293_12125372_12129138_12129288_12139838_12139885_12141146
transcript_8259.nic	chr1	+	655	5	ISM	ENSG00000142937.12	ENST00000396651.8	778	6	-178	747	111	-55	5prime_fragment	FALSE	canonical	3	8257	junction_1	2135.54681229422	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CGATCTAAAAAAATTCAGAA	44775345	True	NA	-10	True	TTTAAA	-8	NA	44775361	44778032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_44775601_44776033_44776141_44776674_44776775_44777613_44777790_44777999
transcript_82593.known	chr17	+	1064	10	FSM	ENSG00000065559.15	ENST00000602375.5	1064	10	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	72.7568248039698	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAAAGGGCTGAGAGGA	12016325	True	NA	NA	False	NA	NA	NA	12020869	12141282	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_12021002_12054888_12054992_12095574_12095695_12107789_12107910_12110374_12110427_12113232_12113361_12125293_12125372_12129138_12129288_12139838_12139885_12141146
transcript_82595.known	chr17	+	1136	10	FSM	ENSG00000065559.15	ENST00000602811.5	1136	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	69.3333333333333	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAAAGGGCTGAGAGGA	12016325	True	NA	NA	False	NA	NA	NA	12020869	12141282	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_12021002_12081355_12081531_12095574_12095695_12107789_12107910_12110374_12110427_12113232_12113361_12125293_12125372_12129138_12129288_12139838_12139885_12141146
transcript_826.known	chr1	-	2815	12	FSM	ENSG00000221978.13	ENST00000481223.6	2815	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	344.489969147108	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCTATGTATGAAAACTC	-1399301	False	14990	-22	True	AATAAA	-20	NA	1399311	1386707	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1387583_1387776_1387870_1387953_1388066_1390229_1390372_1390458_1390564_1390765_1391576_1392789_1392804_1393395_1393461_1395393_1395515_1398232_1398343_1398596_1398672_1399018
transcript_82600.known	chr17	+	961	9	FSM	ENSG00000065559.15	ENST00000602305.5	961	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	73.821998753759	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAAAGGGCTGAGAGGA	12016325	True	NA	NA	False	NA	NA	NA	12020869	12141282	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_12021002_12095574_12095695_12107789_12107910_12110374_12110427_12113232_12113361_12125293_12125372_12129138_12129288_12139838_12139885_12141146
transcript_82607.known	chr17	+	8565	14	FSM	ENSG00000141052.18	ENST00000425538.6	8565	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.5191090506255	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAAACTTTTTTTTTTTC	12665786	True	NA	NA	False	AATAAA	-21	NA	12665889	12768949	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_12666244_12705127_12705194_12715518_12715575_12717345_12717422_12722846_12723009_12736160_12736337_12739202_12739329_12744182_12744437_12745918_12746073_12752413_12753347_12756413_12756558_12758084_12758214_12760649_12760708_12763072
transcript_82610.known	chr17	+	4211	20	FSM	ENSG00000006740.18	ENST00000340825.7	4211	20	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_18	13.9068926094172	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCATCTGTTCTTGCT	12787804	True	NA	11	True	ATTAAA	-20	NA	12789538	12991643	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_12789892_12894939_12894980_12896406_12896512_12908896_12908974_12915899_12916012_12919754_12919832_12928928_12929047_12941055_12941125_12943587_12943670_12944068_12944197_12949139_12949252_12949648_12949731_12952500_12952582_12955866_12955981_12956654_12956747_12958716_12958898_12974088_12974311_12980057_12980234_12984530_12984909_12990031
transcript_82611.known	chr17	+	4143	20	FSM	ENSG00000006740.18	ENST00000580768.5	4143	20	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	37.6835489503821	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGGCATCTGTTCTTGC	12787805	True	NA	10	True	ATTAAA	-19	NA	12789539	12991642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_12789892_12894939_12894980_12896406_12896512_12908896_12908974_12915899_12916012_12919754_12919832_12941055_12941125_12943587_12943670_12944068_12944197_12949139_12949252_12949648_12949731_12952500_12952582_12955866_12955981_12956654_12956747_12958716_12958898_12974088_12974311_12980057_12980234_12984530_12984909_12987100_12987153_12990031
transcript_82612.nic	chr17	+	4469	19	ISM	ENSG00000006740.18	ENST00000340825.7	4211	20	-76	4941	-35	1669	5prime_fragment	TRUE	canonical	3	75	junction_18	14.2275380690467	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATGAGCAGAAGATATCAA	12787728	True	NA	NA	False	NA	NA	NA	12789462	12986702	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_12789892_12894939_12894980_12896406_12896512_12908896_12908974_12915899_12916012_12919754_12919832_12928928_12929047_12941055_12941125_12943587_12943670_12944068_12944197_12949139_12949252_12949648_12949731_12952500_12952582_12955866_12955981_12956654_12956747_12958716_12958898_12974088_12974311_12980057_12980234_12984530
transcript_82614.nnic	chr17	+	4065	19	NIC	ENSG00000006740.18	novel	4211	20	NA	NA	-35	0	intron_retention	FALSE	canonical	2	13	junction_16	24.4568150516198	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCATCTGTTCTTGCT	12787728	True	NA	11	True	ATTAAA	-20	NA	12789462	12991643	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_12789892_12894939_12894980_12896406_12896512_12908896_12908974_12915899_12916012_12919754_12919832_12928928_12929047_12941055_12941125_12943587_12943670_12944068_12944197_12949139_12949252_12949648_12949731_12952500_12952582_12955866_12955981_12956654_12956747_12958716_12958898_12980057_12980234_12984530_12984909_12990031
transcript_82641.nic	chr17	-	2777	24	NIC	ENSG00000006744.19	novel	3767	24	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_23	171.554397067283	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGAGTTCTTTTGCTTCC	-13005333	False	12347	-6	True	AATAAA	-15	NA	13017680	12992390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_12993046_12993686_12993832_12994424_12994504_12994763_12994885_12994962_12995063_12995702_12995813_12995939_12995979_12996546_12996686_12998411_12998509_13000155_13000275_13002273_13002360_13002440_13002580_13003478_13003575_13004988_13005102_13005752_13005826_13005920_13005980_13010612_13010672_13011662_13011783_13013206_13013276_13014438_13014497_13015767_13015833_13016861_13016933_13017070_13017122_13017566
transcript_82642.known	chr17	-	3767	24	FSM	ENSG00000006744.19	ENST00000338034.9	3767	24	0	0	0	0	multi-exon	FALSE	canonical	3	700	junction_21	59.6112167671592	1162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGACAACGATTTGTAC	-13005680	True	NA	-8	True	AATAAA	-19	NA	13018027	12991611	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_12993046_12993686_12993832_12994424_12994504_12994763_12994885_12994962_12995063_12995702_12995813_12995939_12995979_12996546_12996686_12998411_12998509_13000155_13000275_13002273_13002360_13002440_13002580_13003478_13003575_13004988_13005102_13005752_13005826_13005920_13005980_13010612_13010672_13011662_13011783_13013206_13013276_13014438_13014497_13015767_13015833_13016861_13016933_13017070_13017122_13017702
transcript_82653.known	chr17	-	2671	23	FSM	ENSG00000006744.19	ENST00000426905.7	2671	23	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_17	176.874990874047	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGCAGTTTTTAAAGAAGT	-13005652	True	NA	NA	False	NA	NA	NA	13017999	12992559	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_12993046_12993686_12993832_12994424_12994504_12994763_12994885_12994962_12995063_12995702_12995813_12995939_12995979_12996546_12996686_12998411_12998509_13000155_13000275_13002273_13002360_13002440_13002580_13003478_13003575_13004988_13005102_13005752_13005826_13005920_13005980_13010612_13010672_13013206_13013276_13014438_13014497_13015767_13015833_13016861_13016933_13017070_13017122_13017702
transcript_82655.nic	chr17	-	3661	23	NIC	ENSG00000006744.19	novel	3767	24	NA	NA	16	0	intron_retention	FALSE	canonical	3	700	junction_20	58.1173648677704	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGAGTTCTTTTGCTTCC	-13005702	False	NA	-6	True	AATAAA	-15	NA	13018049	12992390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_12993046_12993686_12993832_12994424_12994504_12994763_12994885_12994962_12995063_12995702_12995813_12995939_12995979_12996546_12996686_12998411_12998509_13000155_13000275_13002273_13002360_13002440_13002580_13003478_13003575_13004988_13005826_13005920_13005980_13010612_13010672_13011662_13011783_13013206_13013276_13014438_13014497_13015767_13015833_13016861_13016933_13017070_13017122_13017702
transcript_82663.nic	chr17	-	3088	23	NIC	ENSG00000006744.19	novel	3767	24	NA	NA	16	0	intron_retention	FALSE	canonical	3	700	junction_20	60.9304067179099	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGAGTTCTTTTGCTTCC	-13005702	False	NA	-6	True	AATAAA	-15	NA	13018049	12992390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_12993046_12993686_12993832_12994424_12994504_12994763_12995063_12995702_12995813_12995939_12995979_12996546_12996686_12998411_12998509_13000155_13000275_13002273_13002360_13002440_13002580_13003478_13003575_13004988_13005102_13005752_13005826_13005920_13005980_13010612_13010672_13011662_13011783_13013206_13013276_13014438_13014497_13015767_13015833_13016861_13016933_13017070_13017122_13017702
transcript_82693.known	chr17	-	4186	2	FSM	ENSG00000153976.3	ENST00000284110.2	4186	2	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTTTTTGAACATAGATA	-13601154	True	NA	NA	False	AATAAA	-24	NA	13601929	13494031	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_13496819_13600530
transcript_82699.known	chr17	+	2898	7	FSM	ENSG00000006695.12	ENST00000261643.8	2898	7	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_3	34.9638702408961	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGAGTGTGTGTGACGTCA	14065002	True	NA	11	True	AATAAA	-15	NA	14069503	14208677	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_14069649_14074322_14074457_14076734_14077057_14102117_14102243_14159876_14159948_14191988_14192222_14206809
transcript_82702.nnic	chr17	+	2662	6	NIC	ENSG00000006695.12	novel	2898	7	NA	NA	0	-3	intron_retention	FALSE	canonical	3	8	junction_5	109.517852425986	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAGGAGTGTGTGTGACG	14065002	True	NA	8	True	AATAAA	-12	NA	14069503	14208674	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_14069649_14074322_14074457_14076734_14077057_14102117_14102243_14159876_14159948_14206809
transcript_82704.known	chr17	+	1509	6	FSM	ENSG00000006695.12	ENST00000581931.5	1509	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	108.512487760626	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATACACAGCTTCCTCT	14065102	False	NA	NA	False	NA	NA	NA	14069603	14207513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_14069649_14074322_14074457_14076734_14077057_14159876_14159948_14191988_14192222_14206809
transcript_82706.known	chr17	+	875	3	FSM	ENSG00000006695.12	ENST00000429152.6	875	3	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_2	8.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCTTTAGTGTTT	14064994	True	NA	NA	False	ATTAAA	-22	NA	14069495	14077322	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_14069649_14074322_14074457_14076734
transcript_82707.known	chr17	+	2808	3	FSM	ENSG00000125430.9	ENST00000466596.5	2808	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	2.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTTCTCACTTTTGTGA	14300096	True	NA	NA	False	AATAAA	-19	NA	14301082	14349144	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_14302073_14345027_14345703_14348001
transcript_82708.known	chr17	+	5369	2	FSM	ENSG00000125430.9	ENST00000360954.3	5369	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGGGTACCTTTATGTT	14300094	True	NA	14	True	AATAAA	-15	NA	14301080	14349404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_14302073_14345027
transcript_8271.known	chr1	+	1115	5	FSM	ENSG00000142937.12	ENST00000485390.5	1115	5	0	0	0	0	multi-exon	FALSE	canonical	3	12478	junction_1	500.554380162635	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTTGCCCTGCAAAACT	44759582	False	NA	52	True	AATATA	-21	NA	44775635	44778779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_44776141_44776674_44776775_44777613_44777790_44777999_44778130_44778575
transcript_82711.known	chr17	-	2423	5	FSM	ENSG00000109099.16	ENST00000674673.1	2423	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	4.03112887414927	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTGAGTTTTTGTGGGA	NA	False	NA	5	True	AATAAA	-22	NA	15263190	15229772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_15231081_15239470_15239612_15259093_15259194_15260649_15260762_15262428
transcript_82712.known	chr17	-	2047	5	FSM	ENSG00000109099.16	ENST00000675808.1	2047	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	6.94172168845741	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTCACTGGTCTCTCTTG	-15262532	True	NA	-8	True	AATAAA	-9	NA	15262605	15229785	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_15231081_15239470_15239612_15259093_15259194_15260649_15260984_15262428
transcript_82713.known	chr17	-	1543	3	FSM	ENSG00000109099.16	ENST00000674707.1	1543	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCAGAGTAACTCACTGG	-15262471	True	NA	-17	True	ATTAAA	-5	NA	15262544	15229794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_15231081_15239470_15239612_15262428
transcript_8272.known	chr1	-	385	1	FSM	ENSG00000234093.3	ENST00000594193.1	385	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAGGGATGTAATACATAT	-44780439	False	NA	NA	False	AAAACA	-30	NA	44780715	44780330	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_44780300_44780700
transcript_82721.nnic	chr17	-	3014	8	NIC	ENSG00000259024.6	novel	2833	7	NA	NA	-46	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_3	100.415869954781	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATCTCTTTTGTTCTT	-15562312	True	NA	-11	True	AATAAA	-15	NA	15563607	15436020	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_15438201_15440207_15440286_15503097_15503233_15545784_15545917_15547058_15547149_15553684_15553830_15555281_15555365_15563436
transcript_82726.nnic	chr17	-	3008	8	NIC	ENSG00000259024.6	novel	2833	7	NA	NA	-46	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_2	99.1101222203394	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATCTCTTTTGTTCTT	-15562312	True	NA	-11	True	AATAAA	-15	NA	15563607	15436020	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_15438201_15440207_15440286_15540432_15540562_15545784_15545917_15547058_15547149_15553684_15553830_15555281_15555365_15563436
transcript_8273.nic	chr1	-	1136	2	ISM	ENSG00000142959.5	ENST00000372207.4	2512	9	3305	0	3305	0	3prime_fragment	FALSE	canonical	3	35	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGTTTAGTTTTTGTTT	-44784589	True	NA	-9	True	AATATA	-18	NA	44784865	44783584	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_44784484_44784628
transcript_82732.known	chr17	-	2833	7	FSM	ENSG00000259024.6	ENST00000522212.6	2833	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	90.2213327816037	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATCTCTTTTGTTCTT	-15562266	True	NA	-11	True	AATAAA	-15	NA	15563561	15436020	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_15438201_15440207_15440286_15545784_15545917_15547058_15547149_15553684_15553830_15555281_15555365_15563436
transcript_82733.known	chr17	-	520	7	FSM	ENSG00000259024.6	ENST00000518506.4	520	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	109.031213675514	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGTCACCTATACCTCT	-15562153	True	NA	NA	False	AAAACA	-15	NA	15563448	15438140	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_15438201_15440207_15440286_15545784_15545917_15547058_15547149_15553764_15553830_15555281_15555365_15563436
transcript_82739.known	chr17	-	556	6	FSM	ENSG00000259024.6	ENST00000481756.7	556	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	90.8858624869677	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTCGAGGAAAGACCCTG	-15562177	True	NA	NA	False	NA	NA	NA	15563472	15438063	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_15438201_15440207_15440286_15545784_15545917_15547058_15547149_15555281_15555365_15563436
transcript_82743.known	chr17	-	1527	6	FSM	ENSG00000175106.17	ENST00000225576.7	1527	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	96.3713650416969	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGGCCTTCGTAATGAAA	-15562249	True	NA	NA	False	ATTAAA	-19	NA	15563544	15502263	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_15503233_15545784_15545917_15547058_15547149_15553684_15553830_15555281_15555365_15563436
transcript_82746.known	chr17	-	3358	12	FSM	ENSG00000221926.13	ENST00000649191.2	3358	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	16.9349753005356	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTATGTGCCAGATACC	-15683069	True	NA	-15	True	AATAAA	-16	NA	15684311	15627965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_15629199_15631618_15631715_15632508_15632675_15636035_15636270_15642720_15642817_15651090_15651947_15677175_15677281_15677574_15677722_15680864_15680954_15682853_15682952_15683035_15683158_15684195
transcript_82747.nic	chr17	-	2599	12	NIC	ENSG00000221926.13	novel	3358	12	NA	NA	-22	0	intron_retention	FALSE	canonical	2	3	junction_6	16.1807966991178	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTATGTGCCAGATACC	-15683091	False	NA	-15	True	AATAAA	-16	NA	15684333	15627965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_15629199_15631618_15631715_15632508_15632675_15636035_15636270_15642720_15642817_15658801_15658877_15677175_15677281_15677574_15677722_15680864_15680954_15682853_15682952_15683035_15683158_15684195
transcript_82750.nic	chr17	-	2485	11	NIC	ENSG00000221926.13	novel	3358	12	NA	NA	-22	0	intron_retention	FALSE	canonical	2	3	junction_7	14.8606863906079	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTATGTGCCAGATACC	-15683091	False	NA	-15	True	AATAAA	-16	NA	15684333	15627965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_15629199_15631618_15631715_15632508_15632675_15636035_15636270_15642720_15642817_15677175_15677281_15677574_15677683_15680864_15680954_15682853_15682952_15683035_15683158_15684195
transcript_82751.nic	chr17	-	2524	11	NIC	ENSG00000221926.13	novel	3358	12	NA	NA	-22	0	intron_retention	FALSE	canonical	3	29	junction_7	9.55824251627882	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTATGTGCCAGATACC	-15683091	False	NA	-15	True	AATAAA	-16	NA	15684333	15627965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_15629199_15631618_15631715_15632508_15632675_15636035_15636270_15642720_15642817_15677175_15677281_15677574_15677722_15680864_15680954_15682853_15682952_15683035_15683158_15684195
transcript_82754.nic	chr17	-	2347	10	NIC	ENSG00000221926.13	novel	3358	12	NA	NA	-22	0	intron_retention	FALSE	canonical	3	4	junction_6	17.2290309121796	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTATGTGCCAGATACC	-15683091	False	NA	-15	True	AATAAA	-16	NA	15684333	15627965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_15629199_15631618_15631715_15632508_15632675_15636035_15636270_15642720_15642817_15658801_15658877_15680864_15680954_15682853_15682952_15683035_15683158_15684195
transcript_82756.nic	chr17	-	2426	10	NIC	ENSG00000221926.13	novel	3358	12	NA	NA	-22	0	intron_retention	FALSE	canonical	2	4	junction_8	15.0775771705315	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTATGTGCCAGATACC	-15683091	False	NA	-15	True	AATAAA	-16	NA	15684333	15627965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_15629199_15631618_15631715_15632508_15632675_15636035_15636270_15642720_15642817_15677175_15677281_15677574_15677722_15680864_15680954_15683035_15683158_15684195
transcript_82757.nic	chr17	-	2377	10	NIC	ENSG00000221926.13	novel	3358	12	NA	NA	-22	0	intron_retention	FALSE	canonical	1	1	junction_6	15.8472648261186	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTATGTGCCAGATACC	-15683091	False	NA	-15	True	AATAAA	-16	NA	15684333	15627965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_15629199_15631618_15631715_15632508_15632675_15636035_15636270_15642720_15642817_15677175_15677281_15680864_15680954_15682853_15682952_15683035_15683158_15684195
transcript_8276.known	chr1	+	2340	15	FSM	ENSG00000173846.13	ENST00000372201.5	2340	15	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_11	8.58362227900153	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGACTCCCCCTCACTCGC	44799797	True	NA	7	True	AATAAA	-14	NA	44800376	44805990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_44800674_44800839_44800948_44801035_44801153_44801621_44801752_44801844_44801933_44802759_44802856_44802954_44803154_44803267_44803392_44803599_44803692_44803930_44804025_44804162_44804247_44804338_44804502_44804649_44804780_44805265_44805380_44805486
transcript_82761.nic	chr17	-	2272	9	NIC	ENSG00000221926.13	novel	3358	12	NA	NA	-22	0	intron_retention	FALSE	canonical	3	8	junction_5	14.2916059279565	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTATGTGCCAGATACC	-15683091	False	NA	-15	True	AATAAA	-16	NA	15684333	15627965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_15629199_15631618_15631715_15632508_15632675_15636035_15636270_15642720_15642817_15680864_15680954_15682853_15682952_15683035_15683158_15684195
transcript_82767.known	chr17	-	3184	7	FSM	ENSG00000221926.13	ENST00000416464.6	3184	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	21.338541031039	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGCCAGATACCGTTCTT	-15683057	True	NA	-9	True	AATAAA	-22	NA	15684299	15627959	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_15629199_15631618_15631715_15632508_15632675_15636035_15636270_15642720_15642817_15680864_15680954_15683035
transcript_82778.known	chr17	+	607	6	FSM	ENSG00000187607.16	ENST00000585194.5	607	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	57.9434206791418	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATGTCTTTCAGACATGG	15693762	True	NA	NA	False	NA	NA	NA	15699744	15716044	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_15699778_15700134_15700367_15701151_15701241_15706386_15706502_15708154_15708248_15715999
transcript_82780.known	chr17	+	5284	6	FSM	ENSG00000187607.16	ENST00000583566.6	5284	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	64.9430519763277	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTAAATTGCTTTTAA	15693769	True	NA	10	True	AATAAA	-27	NA	15699751	15720787	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_15699778_15700134_15700367_15701151_15701241_15706386_15706502_15708154_15708248_15716058
transcript_82782.known	chr17	+	5443	6	FSM	ENSG00000187607.16	ENST00000395894.6	5443	6	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	42.4358339142758	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTAAATTGCTTTTAA	15693756	True	NA	10	True	AATAAA	-27	NA	15699738	15720787	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_15699778_15700047_15700367_15701151_15701241_15706386_15706502_15708154_15708248_15715999
transcript_82785.known	chr17	+	5541	6	FSM	ENSG00000187607.16	ENST00000421016.5	5541	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_5	53.3051592249756	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTTTTGTAAATTGCT	NA	False	NA	5	True	AATAAA	-22	NA	15699576	15720782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_15699778_15700047_15700367_15701151_15701241_15706386_15706502_15708154_15708248_15716058
transcript_8279.nic	chr1	+	2685	14	NIC	ENSG00000173846.13	novel	2340	15	NA	NA	-475	0	combination_of_known_junctions	TRUE	canonical	3	7	junction_12	12.0152762725343	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGACTCCCCCTCACTCGC	NA	False	NA	7	True	AATAAA	-14	NA	44799901	44805990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_44800674_44800839_44800948_44801035_44801153_44801621_44801752_44801844_44801933_44802759_44802856_44802954_44803154_44803267_44803392_44803599_44803692_44803930_44804025_44804162_44804247_44804338_44804502_44805265_44805380_44805486
transcript_82790.nic	chr17	+	854	5	ISM	ENSG00000187607.16	ENST00000395894.6	5443	6	-22	12363	-2	0	5prime_fragment	FALSE	canonical	3	78	junction_1	43.222534631833	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGATTAGACACGTACTA	15693734	True	NA	10	True	AATAAA	-22	NA	15699716	15708424	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_15699778_15700047_15700367_15701151_15701241_15706386_15706502_15708154
transcript_82796.known	chr17	+	689	2	FSM	ENSG00000187607.16	ENST00000582094.1	689	2	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGCAGCTGGGCACACA	NA	False	NA	NA	False	NA	NA	NA	15699580	15700539	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_15699778_15700047
transcript_82797.known	chr17	+	1522	2	FSM	ENSG00000170425.4	ENST00000304222.3	1522	2	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTTGCCAGGAAGGTG	15945052	True	NA	NA	False	AATAAA	-23	NA	15945129	15975746	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_15945584_15974678
transcript_82803.known	chr17	-	969	6	FSM	ENSG00000214941.8	ENST00000476496.5	969	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	251.893151951378	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGACTCAGCATAACTTA	-15994714	True	NA	0	True	GATAAA	-32	NA	15999588	15976559	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_15977093_15978043_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999502
transcript_82806.known	chr17	-	671	6	FSM	ENSG00000214941.8	ENST00000474716.5	671	6	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_5	173.724609655627	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTCTTTTTTTTTTTCT	-15994765	True	NA	0	True	AATAAA	-28	NA	15999639	15977726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_15977914_15978043_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999505
transcript_82807.known	chr17	-	558	6	FSM	ENSG00000214941.8	ENST00000495825.6	558	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	207.269486418045	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTAGTCTTTTTTTTTT	-15994809	True	NA	-3	True	AATAAA	-25	NA	15999683	15977729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_15977914_15978043_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999659
transcript_82808.known	chr17	-	682	5	FSM	ENSG00000214941.8	ENST00000460252.5	682	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_4	218.064783951926	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCGTGGGCTGTGGAGG	-15994807	True	NA	NA	False	NA	NA	NA	15999681	15977890	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999502
transcript_82809.known	chr17	-	1869	5	FSM	ENSG00000214941.8	ENST00000399280.6	1869	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	231.448023322732	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGACTCAGCATAACTTA	-15994820	True	NA	0	True	GATAAA	-32	NA	15999694	15976559	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999659
transcript_82810.nic	chr17	-	538	4	ISM	ENSG00000214941.8	ENST00000472495.5	703	6	-31	3202	-2	-2851	5prime_fragment	FALSE	canonical	3	335	junction_3	102.713192920871	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTAGTTTTTTGTCTTTGT	-15994841	True	NA	NA	False	NA	NA	NA	15999715	15980928	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_15981145_15987265_15987369_15993756_15993779_15999518
transcript_82811.known	chr17	-	987	8	FSM	ENSG00000214941.8	ENST00000585208.5	987	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	215.354667126258	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTATTTAGTCTTTTTTT	-15994760	True	NA	-6	True	AATAAA	-22	NA	15999634	15977732	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_15977914_15978043_15978164_15981039_15981145_15986799_15986887_15987265_15987369_15990864_15991105_15993756_15993779_15999505
transcript_82814.known	chr17	-	1969	17	FSM	ENSG00000141027.22	ENST00000436828.5	1969	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	94.3329997601582	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAAAGAAAGATGA	-16201096	True	NA	-50	True	GATAAA	-22	NA	16215530	16126131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_16126207_16137310_16137413_16138157_16138213_16139007_16139187_16143605_16143697_16146375_16146549_16149450_16149518_16151589_16151617_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16198600_16198720_16215361
transcript_82816.known	chr17	-	1877	16	FSM	ENSG00000141027.22	ENST00000582357.5	1877	16	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	63.4619746164758	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGATGAAAAAGAAGAC	-16201095	True	NA	-25	True	AAAAAG	-25	NA	16215529	16126106	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_16126210_16137310_16137413_16138157_16138213_16139007_16139187_16143605_16143697_16146375_16146549_16149450_16149518_16151589_16151617_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16215361
transcript_82818.nic	chr17	-	1921	16	NIC	ENSG00000141027.22	novel	1969	17	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	3	126	junction_8	62.4117510302881	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAAAGAAAGATGA	-16215542	False	NA	-50	True	GATAAA	-22	NA	16215601	16126131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_16126207_16137310_16137413_16138157_16138213_16139007_16139187_16143605_16143697_16146375_16146549_16149450_16149518_16151589_16151617_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16215361
transcript_82824.nic	chr17	-	1916	16	ISM	ENSG00000141027.22	ENST00000436828.5	1969	17	-22	11179	-4	-11179	5prime_fragment	FALSE	canonical	0	0	junction_14	94.3775867930988	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTTTCTTACTTGTAT	-16201118	True	NA	NA	False	NA	NA	NA	16215552	16137310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_16137413_16138157_16138213_16139007_16139187_16143605_16143697_16146375_16146549_16149450_16149518_16151589_16151617_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16198600_16198720_16215361
transcript_82826.known	chr17	-	1883	15	FSM	ENSG00000141027.22	ENST00000411510.5	1883	15	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	57.1839138219832	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGTTAAATAATTAGTTA	-16201103	True	NA	0	True	AAAAAG	-20	NA	16215537	16126081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_16126210_16137310_16137413_16138157_16138213_16139007_16139187_16143605_16143697_16146375_16146549_16149450_16149518_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16215361
transcript_82828.nic	chr17	-	1894	15	ISM	ENSG00000141027.22	ENST00000268712.8	10705	46	-67	96975	-53	0	5prime_fragment	FALSE	canonical	3	129	junction_7	55.846363592723	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAAAGAAAGATGA	-16215542	False	NA	-50	True	GATAAA	-22	NA	16215601	16126131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_16126207_16137310_16137413_16138157_16138213_16139007_16139187_16143605_16143697_16146375_16146549_16149450_16149518_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16215361
transcript_82830.nic	chr17	-	1846	15	ISM	ENSG00000141027.22	ENST00000582357.5	1877	16	-72	11204	-53	-11179	5prime_fragment	FALSE	canonical	3	126	junction_7	55.3871807904895	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTTTCTTACTTGTAT	-16215542	False	NA	NA	False	NA	NA	NA	16215601	16137310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_16137413_16138157_16138213_16139007_16139187_16143605_16143697_16146375_16146549_16149450_16149518_16151589_16151617_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16215361
transcript_82832.nic	chr17	-	1788	15	ISM	ENSG00000141027.22	ENST00000582357.5	1877	16	-72	11262	-53	-11237	5prime_fragment	FALSE	canonical	3	126	junction_7	55.3871807904895	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAATTATAAAGCCCTCG	-16215542	False	NA	NA	False	AAGAAA	-3	NA	16215601	16137368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_16137413_16138157_16138213_16139007_16139187_16143605_16143697_16146375_16146549_16149450_16149518_16151589_16151617_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16215361
transcript_82836.nic	chr17	-	1819	14	ISM	ENSG00000141027.22	ENST00000411510.5	1883	15	-64	11229	-53	-11179	5prime_fragment	FALSE	canonical	3	129	junction_6	44.6018547124106	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTTTCTTACTTGTAT	-16215542	False	NA	NA	False	NA	NA	NA	16215601	16137310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_16137413_16138157_16138213_16139007_16139187_16143605_16143697_16146375_16146549_16149450_16149518_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16215361
transcript_82837.nic	chr17	-	1761	14	ISM	ENSG00000141027.22	ENST00000411510.5	1883	15	-64	11287	-53	-11237	5prime_fragment	FALSE	canonical	3	129	junction_6	44.6018547124106	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAATTATAAAGCCCTCG	-16215542	False	NA	NA	False	AAGAAA	-3	NA	16215601	16137368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_16137413_16138157_16138213_16139007_16139187_16143605_16143697_16146375_16146549_16149450_16149518_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16215361
transcript_82850.nic	chr17	-	1316	11	ISM	ENSG00000141027.22	ENST00000436828.5	1969	17	-24	23321	-6	15418	5prime_fragment	FALSE	canonical	0	0	junction_9	103.698794592801	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGAGGTCCTATCCTTGT	-16201120	True	NA	NA	False	AAGAAA	-18	NA	16215554	16149452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_16149518_16151589_16151617_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16198600_16198720_16215361
transcript_82853.nic	chr17	-	1316	10	ISM	ENSG00000141027.22	ENST00000411510.5	1883	15	-64	20370	-53	18419	5prime_fragment	FALSE	canonical	3	129	junction_2	49.6252623838571	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAACAAGGGAATACTAT	-16215542	False	NA	-40	True	AATAGA	-30	NA	16215601	16146451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_16146549_16149450_16149518_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16215361
transcript_82854.nic	chr17	-	1244	10	ISM	ENSG00000141027.22	ENST00000582357.5	1877	16	-72	23346	-53	15418	5prime_fragment	FALSE	canonical	3	126	junction_2	63.4620524310822	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGAGGTCCTATCCTTGT	-16215542	False	NA	NA	False	AAGAAA	-18	NA	16215601	16149452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_16149518_16151589_16151617_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16215361
transcript_82856.nic	chr17	-	1217	9	ISM	ENSG00000141027.22	ENST00000411510.5	1883	15	-64	23371	-53	15418	5prime_fragment	FALSE	canonical	3	129	junction_1	52.5105644132683	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGAGGTCCTATCCTTGT	-16215542	False	NA	NA	False	AAGAAA	-18	NA	16215601	16149452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_16149518_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16215361
transcript_82865.nic	chr17	-	997	6	ISM	ENSG00000141027.22	ENST00000436828.5	1969	17	-24	38850	-6	-76	5prime_fragment	FALSE	canonical	0	0	junction_4	122.251216762861	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTAAATGTCTTTGCTTA	-16201120	True	NA	NA	False	AAAAAG	-4	NA	16215554	16164981	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16198600_16198720_16215361
transcript_82866.known	chr17	-	983	5	FSM	ENSG00000141027.22	ENST00000585296.1	983	5	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_1	22.3983816379666	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATTCGGACTTGCTGTT	-16201114	True	NA	NA	False	CATAAA	-15	NA	16215548	16164870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16215361
transcript_82869.known	chr17	-	1848	15	FSM	ENSG00000141027.22	ENST00000460276.5	1848	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	86.7036060733488	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAAAGAAAGATGA	-16201096	True	NA	-50	True	GATAAA	-22	NA	16215530	16126131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_16126207_16137310_16137413_16138157_16138213_16139007_16139187_16143605_16143697_16146375_16146549_16149450_16149518_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16172021_16186553_16186688_16194461_16194640_16215361
transcript_82874.known	chr17	+	3050	10	FSM	ENSG00000011295.16	ENST00000261647.10	3050	10	0	0	0	0	multi-exon	FALSE	canonical	3	433	junction_1	73.8839597353366	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGTCACTGGAGTTTTC	15995913	True	NA	1	True	ATTAAA	-15	NA	15999823	16029404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16000033_16000117_16000246_16001914_16002026_16002792_16002832_16003830_16003888_16004200_16004263_16006473_16006569_16025016_16025172_16026539_16026703_16027373
transcript_82879.known	chr17	+	2591	10	FSM	ENSG00000011295.16	ENST00000475723.5	2591	10	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	179.539809540604	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATGTATCCCAGTAATC	15995891	True	NA	19	True	AATAAA	-19	NA	15999801	16028786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16000033_16000117_16000383_16001914_16002026_16002792_16002832_16003830_16003888_16004200_16004263_16006473_16006569_16025016_16025172_16026539_16026703_16027373
transcript_8288.nic	chr1	+	2289	12	ISM	ENSG00000173846.13	ENST00000372201.5	2340	15	-67	859	-67	10	intron_retention	FALSE	canonical	3	24	junction_11	5.72799418255395	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAACCCATCCTGATCCCTC	44799730	True	NA	NA	False	AATAAA	-11	NA	44800309	44805131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_44800674_44800839_44800948_44801035_44801153_44801621_44801752_44801844_44801933_44802759_44802856_44802954_44803154_44803267_44803392_44803599_44803692_44803930_44804025_44804162_44804247_44804338
transcript_82890.nic	chr17	+	716	7	ISM	ENSG00000011295.16	ENST00000261647.10	3050	10	-54	22875	-14	2278	5prime_fragment	FALSE	canonical	3	433	junction_1	80.5336368647702	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGAAAGAGAAAAGGAATTA	15995859	True	NA	NA	False	NA	NA	NA	15999769	16006529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_16000033_16000117_16000246_16001914_16002026_16002792_16002832_16003830_16003888_16004200_16004263_16006473
transcript_82895.known	chr17	+	552	2	FSM	ENSG00000011295.16	ENST00000583704.1	552	2	0	0	0	0	multi-exon	FALSE	canonical	3	433	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGCAAATGGAGATGGCG	15995913	True	NA	NA	False	AGTAAA	-15	NA	15999823	16000460	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16000033_16000117
transcript_82900.known	chr17	+	1289	7	FSM	ENSG00000108474.17	ENST00000225609.10	1289	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	13.29995822884	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTCTGATTGAAGCATC	16214730	True	NA	NA	False	NA	NA	NA	16217209	16326411	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16217462_16233970_16234071_16299887_16299979_16313546_16313615_16316680_16316713_16317774_16317909_16325799
transcript_82910.known	chr17	+	1257	6	FSM	ENSG00000108474.17	ENST00000395844.8	1257	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	24.4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTCTGATTGAAGCATC	16214730	True	NA	NA	False	NA	NA	NA	16217209	16326411	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16217462_16233970_16234071_16299887_16299979_16313546_16313615_16317774_16317909_16325799
transcript_82913.known	chr17	+	946	5	FSM	ENSG00000108474.17	ENST00000498772.6	946	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	10.6858551365813	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTACCTGACCATTTACTG	16214730	True	NA	NA	False	CATAAA	-9	NA	16217209	16317115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16217462_16233970_16234071_16299887_16299979_16313546_16313615_16316680
transcript_82914.known	chr17	+	888	2	FSM	ENSG00000108474.17	ENST00000463810.2	888	2	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTTTCCCATTTGTTTG	16214766	True	NA	14	True	AATAAA	-25	NA	16217245	16218219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16217462_16217547
transcript_82915.nnic	chr17	-	1407	6	NNC	ENSG00000166582.11	novel	1132	5	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_3	788.371739726888	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCACTTTGGTTTATCA	-16339489	True	NA	-22	True	AATAAA	-17	NA	16353434	16342536	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_16342942_16344596_16344712_16348615_16348686_16349023_16349334_16349930_16350030_16353026
transcript_82916.nic	chr17	-	1347	6	NIC	ENSG00000166582.11	novel	1132	5	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	97	junction_3	771.900148983015	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCACTTTGGTTTATCA	-16339545	True	NA	-22	True	AATAAA	-17	NA	16353490	16342536	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_16342942_16344596_16344712_16348615_16348686_16349139_16349334_16349930_16350030_16353026
transcript_8292.known	chr1	-	1900	12	FSM	ENSG00000070785.17	ENST00000360403.7	1900	12	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_2	64.0273701805049	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACGCCTGAGCATCAGC	-44980781	True	NA	NA	False	NA	NA	NA	44986595	44850521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_44851004_44857703_44857808_44874677_44874827_44875617_44875696_44879817_44880009_44881611_44881740_44897354_44897445_44926627_44926740_44941505_44941666_44978314_44978461_44981020_44981178_44986492
transcript_82921.known	chr17	-	1132	5	FSM	ENSG00000166582.11	ENST00000299736.5	1132	5	0	0	0	0	multi-exon	FALSE	canonical	3	1355	junction_3	208.367913796726	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCACTTTGGTTTATCA	-16339524	True	NA	-22	True	AATAAA	-17	NA	16353469	16342536	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_16342942_16344596_16344712_16348615_16348686_16349930_16350030_16353026
transcript_82923.known	chr17	-	1770	5	FSM	ENSG00000166582.11	ENST00000476243.5	1770	5	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_3	603.018449137338	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTTTGGTTTATCATTT	-16339511	True	NA	-19	True	AATAAA	-20	NA	16353456	16342533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_16342942_16344596_16344712_16348615_16349334_16349930_16350030_16353026
transcript_82930.nic	chr17	-	1858	3	FSM	ENSG00000166582.11	ENST00000631687.2	1593	3	-270	5	-25	-5	multi-exon	FALSE	canonical	3	436	junction_1	731	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAAGGTAACCACTGTTAA	-16339549	True	NA	-24	True	AATAAA	-20	NA	16353494	16348042	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_16349334_16349930_16350030_16353026
transcript_82932.known	chr17	-	735	2	FSM	ENSG00000166582.11	ENST00000584214.1	735	2	0	0	0	0	multi-exon	FALSE	canonical	3	1898	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAGGGTCCTCAGGGCTT	-16339500	True	NA	NA	False	NA	NA	NA	16353445	16349713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_16350030_16353026
transcript_82934.known	chr17	+	933	2	FSM	ENSG00000170315.14	ENST00000302182.8	933	2	0	0	0	0	multi-exon	FALSE	canonical	3	6034	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATACTTGGTGTTTTGTCA	16283729	True	NA	19	True	AATAAA	-18	NA	16381090	16382740	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16381185_16381901
transcript_82935.known	chr17	+	477	2	FSM	ENSG00000170315.14	ENST00000578649.1	477	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGTTTTGTCATGAAA	16283733	True	NA	24	True	AATAAA	-23	NA	16381094	16382745	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16381185_16382358
transcript_82936.known	chr17	+	1012	2	FSM	ENSG00000170315.14	ENST00000395839.5	1012	2	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATACTTGGTGTTTTGTCA	16283928	False	NA	19	True	AATAAA	-18	NA	16381289	16382740	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16381463_16381901
transcript_82937.known	chr17	+	2779	15	FSM	ENSG00000187688.15	ENST00000338560.12	2779	15	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_7	5.08749968660682	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTCTGGAAACATTATTT	16415532	True	NA	15	True	AATATA	-17	NA	16415570	16437003	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16415834_16417561_16417869_16420114_16420249_16422598_16422890_16423468_16423768_16426098_16426270_16426721_16426878_16427448_16427548_16428316_16428388_16428816_16428983_16431783_16431851_16431965_16432301_16433573_16433699_16434889_16434970_16436788
transcript_8294.known	chr1	-	1923	11	FSM	ENSG00000070785.17	ENST00000620860.4	1923	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	127.266020602516	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACGCCTGAGCATCAGC	-44980908	True	NA	NA	False	NA	NA	NA	44986722	44850521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_44851004_44874677_44874827_44875617_44875696_44879817_44880009_44881611_44881740_44897354_44897445_44926627_44926740_44941505_44941666_44978314_44978461_44981020_44981178_44986492
transcript_82943.known	chr17	+	1043	6	FSM	ENSG00000175061.19	ENST00000487066.6	1043	6	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	1495.64533228971	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	NA	False	NA	-27	True	AATAAA	-20	NA	16438974	16442018	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439030_16439326_16439415_16439580_16439704_16440184_16440254_16441073_16441131_16441367
transcript_82945.known	chr17	+	1149	6	FSM	ENSG00000175061.19	ENST00000484836.2	1149	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	1422.91354621425	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	16369217	True	NA	-17	True	AATAAA	-30	NA	16439036	16442028	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439061_16439326_16439415_16439527_16439704_16440110_16440254_16441073_16441131_16441367
transcript_82946.known	chr17	+	1061	6	FSM	ENSG00000175061.19	ENST00000662869.1	1061	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1364.53977589516	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	16369217	True	NA	-27	True	AATAAA	-20	NA	16439036	16442018	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439061_16439326_16439415_16439531_16439704_16440184_16440254_16441073_16441131_16441367
transcript_82948.known	chr17	+	1023	6	FSM	ENSG00000175061.19	ENST00000671170.1	1023	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	1309.35455855166	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	16369217	True	NA	-27	True	AATAAA	-20	NA	16439036	16442018	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439061_16439326_16439415_16439580_16439704_16440184_16440254_16441073_16441131_16441356
transcript_82950.known	chr17	+	604	6	FSM	ENSG00000175061.19	ENST00000584926.5	604	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	1502.69882544707	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTGGAGTGTGGTGGCA	16369217	True	NA	NA	False	NA	NA	NA	16439036	16441615	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439061_16439326_16439415_16439659_16439704_16440110_16440254_16441073_16441131_16441367
transcript_82951.known	chr17	+	993	6	FSM	ENSG00000175061.19	ENST00000481898.6	997	6	0	4	0	0	multi-exon	FALSE	canonical	3	222	junction_2	1300.5817160025	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	16369167	True	NA	-17	True	AATAAA	-30	NA	16438986	16442028	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439061_16439326_16439415_16439659_16439704_16440184_16440254_16441073_16441131_16441367
transcript_82954.known	chr17	+	904	5	FSM	ENSG00000175061.19	ENST00000663781.1	904	5	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	1388.21414054172	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	16369181	True	NA	-17	True	AATAAA	-30	NA	16439000	16442028	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439030_16439326_16439415_16440184_16440254_16441073_16441131_16441367
transcript_82955.known	chr17	+	879	5	FSM	ENSG00000175061.19	ENST00000582911.6	885	5	0	6	0	-4	multi-exon	FALSE	canonical	0	0	junction_2	1404.50745370041	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAATTCTTGAAAATGTG	16369200	True	NA	-33	True	AATAAA	-14	NA	16439019	16442012	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439061_16439326_16439394_16440184_16440254_16441073_16441131_16441367
transcript_82956.known	chr17	+	1300	5	FSM	ENSG00000175061.19	ENST00000653954.1	1300	5	0	0	0	0	multi-exon	FALSE	canonical	3	610	junction_2	1139.97442405521	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTTGAAAATGTGTATT	16369217	True	NA	-29	True	AATAAA	-18	NA	16439036	16442016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439061_16439326_16439415_16439527_16439704_16440184_16440254_16441073
transcript_82958.known	chr17	+	1035	5	FSM	ENSG00000175061.19	ENST00000654778.1	1035	5	0	0	0	0	multi-exon	FALSE	canonical	3	455	junction_4	725.442063503351	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	16369190	True	NA	-27	True	AATAAA	-20	NA	16439009	16442018	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439061_16439326_16439415_16439527_16439704_16440184_16440254_16441367
transcript_82960.known	chr17	+	960	5	FSM	ENSG00000175061.19	ENST00000483140.7	965	5	0	5	0	5	multi-exon	FALSE	canonical	3	261	junction_2	794.402448384948	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATGTGTATTTGAAGAA	16369217	True	NA	-22	True	AATAAA	-25	NA	16439036	16442023	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439061_16439326_16439415_16439580_16439704_16440184_16440254_16441367
transcript_82963.known	chr17	+	876	5	FSM	ENSG00000175061.19	ENST00000666215.2	879	5	3	0	0	0	multi-exon	FALSE	canonical	3	222	junction_2	803.507739539577	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	16369217	True	NA	-27	True	AATAAA	-20	NA	16439036	16442018	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439061_16439326_16439415_16439659_16439704_16440184_16440254_16441367
transcript_82965.known	chr17	+	973	5	FSM	ENSG00000175061.19	ENST00000477249.7	973	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	1400.42535948904	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	16369217	True	NA	-17	True	AATAAA	-30	NA	16439036	16442028	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439061_16439326_16439415_16440110_16440254_16441073_16441131_16441367
transcript_82966.known	chr17	+	1217	5	FSM	ENSG00000175061.19	ENST00000475947.7	1217	5	0	0	0	0	multi-exon	FALSE	canonical	3	2296	junction_1	469.010327711448	1946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCCAGATATTCGCTCT	NA	False	NA	31	True	AGTAAA	-26	NA	16438766	16442076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439061_16439326_16439415_16440184_16440254_16441073_16441131_16441367
transcript_82976.known	chr17	+	1159	4	FSM	ENSG00000175061.19	ENST00000491009.6	1159	4	0	0	0	0	multi-exon	FALSE	canonical	3	2296	junction_1	486.548615819175	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	16369184	True	NA	-27	True	AATAAA	-20	NA	16439003	16442018	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439061_16439326_16439415_16440184_16440254_16441073
transcript_82978.known	chr17	+	897	4	FSM	ENSG00000175061.19	ENST00000580180.6	897	4	0	0	0	0	multi-exon	FALSE	canonical	3	455	junction_3	1066.95860588247	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	NA	False	NA	-17	True	AATAAA	-30	NA	16438981	16442028	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439061_16439326_16439415_16440184_16440254_16441367
transcript_82979.known	chr17	+	1685	4	FSM	ENSG00000175061.19	ENST00000497774.6	1685	4	0	0	0	0	multi-exon	FALSE	canonical	3	2296	junction_1	540.219914067924	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	16369191	True	NA	-27	True	AATAAA	-20	NA	16439010	16442018	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439061_16439326_16440254_16441073_16441131_16441367
transcript_82980.known	chr17	+	793	4	FSM	ENSG00000175061.19	ENST00000658116.2	801	4	1	7	0	-5	multi-exon	FALSE	canonical	2	10	junction_1	1617.07190797304	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCAATTCTTGAAAATGT	16369218	True	NA	-34	True	AATAAA	-13	NA	16439037	16442011	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439061_16440184_16440254_16441073_16441131_16441367
transcript_82982.known	chr17	-	3249	4	FSM	ENSG00000181350.12	ENST00000470794.2	3249	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	11.1455023315337	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAAAAAAACTCAAGAATG	-16491168	True	NA	-100	True	AATACA	-31	NA	16492193	16441576	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_16444132_16447844_16447961_16462257_16462387_16491744
transcript_82985.known	chr17	+	1470	3	FSM	ENSG00000175061.19	ENST00000654561.1	1470	3	0	0	0	0	multi-exon	FALSE	canonical	3	2296	junction_1	593.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACAGTCTTGCTGTATT	16369217	True	NA	NA	False	NA	NA	NA	16439036	16441592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439061_16439326_16440254_16441073
transcript_82987.known	chr17	-	2656	3	FSM	ENSG00000181350.12	ENST00000409083.7	2656	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	25.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCAAGACCATCCTTTATT	-16491128	True	NA	-10	True	AATACA	-18	NA	16492153	16442013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_16444132_16462257_16462387_16491744
transcript_82994.known	chr17	+	1201	5	FSM	ENSG00000175061.19	ENST00000475953.6	1209	5	8	0	7	0	multi-exon	FALSE	canonical	3	222	junction_1	1448.64443101128	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	16369225	True	NA	-17	True	AATAAA	-30	NA	16439044	16442028	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439415_16439659_16439704_16440184_16440254_16441073_16441131_16441367
transcript_82995.known	chr17	+	1165	4	FSM	ENSG00000175061.19	ENST00000655540.1	1165	4	0	0	0	0	multi-exon	FALSE	canonical	3	2982	junction_1	218.572642386919	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	16369217	True	NA	-17	True	AATAAA	-30	NA	16439036	16442028	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439415_16440184_16440254_16441073_16441131_16441367
transcript_82996.known	chr17	+	1057	3	FSM	ENSG00000175061.19	ENST00000470491.7	1108	3	22	29	3	-3	multi-exon	FALSE	canonical	3	455	junction_2	1263.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGTCTTGGGTGTCAAT	16369239	True	NA	-46	True	AATAAA	-1	NA	16439058	16441999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439415_16440184_16440254_16441367
transcript_82997.known	chr17	+	3062	5	FSM	ENSG00000175061.19	ENST00000664939.1	3062	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	1330.43157941324	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTGAATATTGAGAAAATT	16369182	True	NA	-9	True	AATATA	-1	NA	16439001	16473090	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439061_16439326_16439415_16440184_16440254_16441073_16441131_16470301
transcript_82998.known	chr17	+	3310	7	FSM	ENSG00000175061.19	ENST00000583400.7	3310	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	1498.8527557213	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAATATATATTGAATATT	16369185	True	NA	-18	True	TTTAAA	-10	NA	16439004	16473081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16439061_16439326_16439415_16440184_16440254_16441073_16441131_16462832_16462942_16463166_16463318_16470301
transcript_82999.known	chr17	+	1930	3	FSM	ENSG00000175061.19	ENST00000659884.1	1930	3	0	0	0	0	multi-exon	FALSE	canonical	3	3396	junction_2	43.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTTGGGTGTCAATTCT	16369196	True	NA	-43	True	AATAAA	-4	NA	16439015	16442002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_16440254_16441073_16441131_16441367
transcript_83.known	SIRV12002	+	11999	1	FSM	SIRV12002A	SIRV12002	11999	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AAGAAA	-36	NA	0	11999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV12002_+_0_12000
transcript_83000.known	chr17	-	7639	6	FSM	ENSG00000141040.15	ENST00000395825.4	7639	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_4	9.92773891679269	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATATGTACAAATGCGTG	-16568530	True	NA	NA	False	ATTAAA	-23	NA	16569204	16546953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_16553427_16563145_16563233_16563698_16563826_16566524_16566623_16567328_16567930_16568951
transcript_83003.known	chr17	-	4241	6	FSM	ENSG00000197566.10	ENST00000311331.12	4241	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	3.05941170815567	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGCGTTTTATTTATTG	-16653697	True	NA	NA	False	ATTAAA	-16	NA	16653850	16620733	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_16624510_16633861_16633958_16634629_16634757_16647328_16647395_16649657_16649747_16653763
transcript_83005.known	chr17	+	3846	24	FSM	ENSG00000133030.22	ENST00000341712.8	3846	24	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	31.1831591406108	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCGGCCCCTCTCCTTCC	17042809	False	NA	79	True	ATTAAA	-13	NA	17042848	17185560	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_17042972_17075709_17075788_17078010_17078077_17126701_17126854_17131616_17131702_17136218_17136451_17137915_17138076_17142626_17142766_17143555_17143670_17146035_17146093_17147318_17147388_17150143_17150234_17154305_17154416_17158431_17159003_17161239_17161357_17171717_17171866_17172697_17172816_17173915_17174076_17175292_17175413_17176425_17176513_17177249_17177413_17180002_17180089_17180606_17180670_17184822
transcript_83007.known	chr17	-	3667	14	FSM	ENSG00000154803.13	ENST00000285071.9	3667	14	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	8.099236577363	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTACTACATGGTTTTAT	-17233822	True	NA	-14	True	AATAAA	-17	NA	17237168	17212211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_17213857_17214984_17215091_17215184_17215317_17216379_17216504_17217068_17217183_17219018_17219210_17221536_17221629_17222500_17222662_17223921_17224144_17226175_17226323_17227888_17228162_17231793_17231883_17232787_17232902_17236911
transcript_83013.known	chr17	-	1692	8	FSM	ENSG00000154803.13	ENST00000389169.9	1692	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_7	3.60272006083385	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCGTCCCAAGTTTTCCAT	-17233793	True	NA	-9	True	AATAAA	-14	NA	17237139	17221170	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_17221629_17222500_17222662_17223921_17224144_17226175_17226323_17227888_17228162_17231793_17231883_17232787_17232902_17236911
transcript_83018.known	chr17	-	2578	2	FSM	ENSG00000179598.6	ENST00000321560.4	2578	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGAGCGCTGGGTGTCTTT	-17205984	True	NA	-5	True	AATAAA	-19	NA	17206333	17200994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_17203099_17205859
transcript_8302.known	chr1	-	1457	10	FSM	ENSG00000070785.17	ENST00000372183.7	1457	10	0	0	0	0	multi-exon	FALSE	canonical	3	383	junction_4	22.4785219847143	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTCAAAAACTTTACTAGG	-44980773	True	NA	-5	True	AATAAA	-21	NA	44986587	44874526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_44874827_44875617_44875696_44879817_44880009_44881611_44881740_44897354_44897445_44926627_44926740_44941505_44941666_44978314_44978461_44981020_44981178_44986492
transcript_83021.known	chr17	-	1814	12	FSM	ENSG00000141030.13	ENST00000268717.10	1814	12	0	0	0	0	multi-exon	TRUE	canonical	3	664	junction_11	72.2685533385918	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGGCTCACACCTGTAAT	-17272636	True	NA	NA	False	AATAAA	-24	NA	17281246	17246615	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_17247152_17247479_17247561_17248925_17249040_17254858_17254946_17260300_17260475_17261965_17262107_17264801_17264982_17267884_17267978_17270757_17270808_17270895_17271009_17276034_17276165_17281131
transcript_83022.known	chr17	-	1625	12	FSM	ENSG00000141030.13	ENST00000578317.5	1625	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	293.756012774756	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTGCTTGAACATTAATG	-17272581	True	NA	-33	True	ATTAAA	-17	NA	17281191	17246836	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_17247152_17247479_17247561_17248925_17249040_17254858_17254946_17260300_17260475_17261965_17262107_17264801_17264982_17267884_17268046_17270757_17270808_17270895_17271009_17276034_17276184_17281131
transcript_83032.nic	chr17	-	1481	11	NIC	ENSG00000141030.13	novel	1814	12	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_4	228.225787324746	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTTGAACATTAATGTG	-17272696	True	NA	-31	True	ATTAAA	-19	NA	17281306	17246834	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_17247152_17247479_17247561_17248925_17249040_17254858_17254946_17261965_17262107_17264801_17264982_17267884_17267978_17270757_17270808_17270895_17271009_17276034_17276165_17281131
transcript_83046.known	chr17	+	1408	6	FSM	ENSG00000205309.14	ENST00000483704.5	1408	6	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	42.3698005659692	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGGCCTGCCCTAAGA	17303657	False	NA	9	True	AATAAA	-24	NA	17303677	17347663	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_17303818_17304363_17304478_17306542_17306644_17323184_17323246_17344793_17344927_17346804
transcript_83048.nnic	chr17	+	1719	6	NNC	ENSG00000205309.14	novel	1581	5	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	42.1834090609092	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGGCCTGCCCTAAGA	17302577	True	NA	9	True	AATAAA	-24	NA	17303327	17347663	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_17303818_17306542_17306644_17323184_17323246_17333495_17333589_17344793_17344909_17346804
transcript_83055.known	chr17	+	1581	5	FSM	ENSG00000205309.14	ENST00000389022.9	1581	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	43.9602092806665	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGGCCTGCCCTAAGA	17302622	True	NA	9	True	AATAAA	-24	NA	17303372	17347663	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_17303818_17306542_17306644_17323184_17323246_17344793_17344909_17346804
transcript_83056.nic	chr17	+	2265	5	NIC	ENSG00000205309.14	novel	1581	5	NA	NA	14	0	intron_retention	FALSE	canonical	0	0	junction_4	47.8036347990401	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGGCCTGCCCTAAGA	17302598	True	NA	9	True	AATAAA	-24	NA	17303348	17347663	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_17304478_17306542_17306644_17323184_17323246_17344793_17344909_17346804
transcript_83059.known	chr17	-	636	1	FSM	ENSG00000215030.5	ENST00000392730.2	636	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTCCTGGGGACTTGGA	-17383959	False	NA	NA	False	AAAAAG	-44	NA	17384012	17383376	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_17383400_17384000
transcript_83060.known	chr17	+	568	3	FSM	ENSG00000141026.6	ENST00000581315.1	568	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTCGAAATCCCCAAGGA	17474203	True	NA	NA	False	NA	NA	NA	17477024	17491471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_17477266_17485299_17485434_17491278
transcript_83062.known	chr17	+	2209	2	FSM	ENSG00000141026.6	ENST00000268711.4	2209	2	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	0	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAATGCTTTTTGTACTGA	17474178	True	NA	16	True	ATTAAA	-27	NA	17476999	17493221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_17477266_17491278
transcript_83063.known	chr17	-	1748	2	FSM	ENSG00000108551.5	ENST00000225688.4	1748	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGTTTTTTTTTTTTTTTT	-17495963	True	NA	-4	True	AATAAA	-19	NA	17496395	17494436	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_17495685_17495895
transcript_83066.known	chr17	-	960	8	FSM	ENSG00000133027.18	ENST00000435340.6	960	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	271.405788517519	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTCCAGCCTCTGTC	-17587554	True	NA	-7	True	AATAAA	-17	NA	17591679	17505562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_17505849_17506226_17506302_17507168_17507203_17509433_17509546_17512508_17512655_17522279_17522396_17576919_17577028_17591596
transcript_83073.known	chr17	-	1021	7	FSM	ENSG00000133027.18	ENST00000255389.10	1021	7	0	0	0	0	multi-exon	FALSE	canonical	3	504	junction_6	31.0733898304571	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTCCAGCCTCTGTC	-17587583	True	NA	-7	True	AATAAA	-17	NA	17591708	17505562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_17505849_17506226_17506302_17509433_17509546_17512508_17512655_17522279_17522396_17576919_17577028_17591530
transcript_83074.nic	chr17	-	939	7	NIC	ENSG00000133027.18	novel	960	8	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_6	197.481152405883	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTCCAGCCTCTGTC	-17587567	True	NA	-7	True	AATAAA	-17	NA	17591692	17505562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_17505849_17506226_17506302_17509433_17509546_17512508_17512655_17522279_17522396_17576919_17577028_17591596
transcript_83076.nic	chr17	-	948	6	NIC	ENSG00000133027.18	novel	1021	7	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_4	201.91721075728	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTCCAGCCTCTGTC	-17591728	False	NA	-7	True	AATAAA	-17	NA	17591751	17505562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_17505849_17506226_17506302_17509433_17509546_17512508_17512655_17576919_17577028_17591530
transcript_83077.nnic	chr17	-	918	6	NIC	ENSG00000133027.18	novel	1021	7	NA	NA	-43	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_3	218.372708917575	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTCCAGCCTCTGTC	-17591728	False	NA	-7	True	AATAAA	-17	NA	17591751	17505562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_17505849_17506226_17506302_17509433_17509546_17522279_17522396_17576919_17577028_17591530
transcript_83079.known	chr17	-	708	5	FSM	ENSG00000133027.18	ENST00000580147.5	708	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	246.191490510944	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCAATAAAGGCACCCTGA	-17587558	True	NA	-33	True	NA	NA	NA	17591683	17505588	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_17505849_17506226_17506302_17509433_17509546_17576919_17577028_17591530
transcript_8308.nic	chr1	-	770	5	ISM	ENSG00000070785.17	ENST00000372183.7	1457	10	-12	52013	0	88	5prime_fragment	FALSE	canonical	3	431	junction_1	8.8423695919137	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGACTATACTGTGTGAAA	-44980785	True	NA	NA	False	AATAAA	-34	NA	44986599	44926539	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_44926740_44941505_44941666_44978314_44978461_44981020_44981178_44986492
transcript_83084.known	chr17	+	7677	6	FSM	ENSG00000108557.20	ENST00000353383.6	7677	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	8.56971411425142	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAGCCCGTGGATTCCG	17680973	True	NA	NA	False	AATAAA	-24	NA	17681457	17811453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_17681794_17724027_17724160_17792932_17798514_17803755_17803850_17809389_17809440_17809969
transcript_83089.known	chr17	-	4253	20	FSM	ENSG00000072310.18	ENST00000355815.8	4253	20	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_19	82.0282364734691	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTGTGTCTTCAGCTGA	-17830220	True	NA	-2	True	ATTAAA	-22	NA	17836987	17812072	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_17812852_17813367_17813480_17813568_17813770_17814244_17814411_17814614_17814748_17814834_17814945_17815220_17815330_17815859_17816029_17816206_17816374_17816456_17816719_17816957_17817137_17817255_17817458_17817695_17817917_17818259_17818375_17819012_17819235_17819319_17819455_17819537_17819726_17820089_17820522_17823517_17823608_17836726
transcript_83092.known	chr17	-	4901	19	FSM	ENSG00000072310.18	ENST00000261646.11	4901	19	0	0	0	0	multi-exon	TRUE	canonical	3	226	junction_12	28.0354713589943	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCAGTGTGAAGCAATAT	-17830219	True	NA	76	True	AATAAA	-31	NA	17836986	17811333	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_17812852_17813367_17813480_17813568_17813770_17814244_17814411_17814614_17814748_17814834_17814945_17815220_17815330_17815859_17816029_17816206_17816374_17816456_17816719_17816957_17817137_17817255_17817458_17817695_17817917_17818259_17818375_17819012_17819235_17819319_17819455_17819537_17819726_17820089_17820522_17836726
transcript_83105.known	chr17	-	5735	15	FSM	ENSG00000175662.18	ENST00000379504.8	5735	15	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	4.76166666071399	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGCCTGTGTGGTCTGTT	-17971858	True	NA	NA	False	AATAAA	-17	NA	17972400	17843510	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_17847784_17848822_17848860_17850892_17850953_17861475_17861552_17862730_17862849_17866295_17866420_17866875_17866925_17869339_17869474_17879626_17879744_17882704_17882864_17884633_17884769_17893660_17893811_17898595_17898675_17907446_17907532_17972261
transcript_83106.known	chr17	-	1766	14	FSM	ENSG00000175662.18	ENST00000395739.8	1766	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	6.2936052827947	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCAGTGCTTCCTGAGCAG	-17971862	True	NA	NA	False	NA	NA	NA	17972404	17847348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_17847784_17848822_17848860_17850892_17850953_17861475_17861552_17862730_17862849_17866295_17866420_17866875_17866925_17869339_17869474_17879626_17879744_17882704_17882864_17893660_17893811_17898595_17898675_17907446_17907532_17972261
transcript_83110.known	chr17	-	1553	8	FSM	ENSG00000171953.16	ENST00000474627.8	1553	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	83.3884443616814	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGTCTAAGCTGGTTGT	-18035247	True	NA	-9	True	NA	NA	NA	18039168	18018020	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_18018687_18021122_18021239_18021744_18021858_18024623_18024705_18026318_18026417_18028231_18028378_18028614_18028660_18038880
transcript_83118.known	chr17	+	4122	6	FSM	ENSG00000141034.10	ENST00000268719.9	4122	6	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_3	26.5887194125629	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTCCTATTTGTAAACC	18036278	True	NA	22	True	AATAAA	-17	NA	18039407	18068405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_18039903_18045146_18045207_18054126_18054235_18058867_18058970_18061844_18061976_18065179
transcript_83121.known	chr17	+	1391	4	FSM	ENSG00000141034.10	ENST00000376345.3	1391	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	73.834650101125	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGACTTAATATCTCTG	18036315	True	NA	NA	False	AATAAA	-20	NA	18039444	18057467	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_18039903_18045146_18045207_18054126_18054235_18056702
transcript_83125.known	chr17	+	1900	13	FSM	ENSG00000108591.10	ENST00000225729.8	1900	13	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_11	15.5929114949354	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGTTCAGACTGAGAAC	18084032	True	NA	9	True	AATAAA	-14	NA	18087947	18107969	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_18088088_18093812_18093974_18098269_18098360_18099016_18099078_18099632_18099724_18100362_18100436_18100568_18100660_18101492_18101591_18101920_18101998_18103800_18103890_18104622_18104682_18106432_18106487_18107153
transcript_83130.known	chr17	+	2531	12	FSM	ENSG00000108591.10	ENST00000467099.6	2531	12	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	88.5072719615888	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGTTCAGACTGAGAACA	18084052	True	NA	10	True	AATAAA	-15	NA	18087967	18107970	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_18088088_18093812_18093969_18098269_18098360_18099016_18099094_18099632_18100436_18100568_18100660_18101492_18101591_18101920_18101998_18103800_18103890_18104622_18104682_18106432_18106487_18107153
transcript_8314.known	chr1	-	3597	21	FSM	ENSG00000126107.15	ENST00000372172.5	3597	21	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_12	16.4669365699878	307	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTCAGAATGTGTTTAT	-45008782	True	NA	-7	True	AATAAA	-13	NA	45011324	45002547	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45003577_45003668_45003741_45003854_45003937_45004059_45004135_45004247_45004378_45004599_45004807_45005793_45005884_45005996_45006117_45006691_45006796_45006950_45007016_45007218_45007272_45007412_45007596_45008239_45008322_45008535_45008702_45009143_45009227_45009368_45009483_45009567_45009684_45009985_45010122_45010200_45010294_45010545_45010707_45010888
transcript_83142.known	chr17	+	891	6	FSM	ENSG00000108591.10	ENST00000583355.1	891	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	89.6178553637611	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGGTCCCTGGAGGCT	18084091	True	NA	NA	False	NA	NA	NA	18088006	18107600	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_18088088_18093812_18093974_18103800_18103890_18104622_18104682_18106432_18106487_18107153
transcript_83149.known	chr17	+	3159	4	FSM	ENSG00000091542.9	ENST00000399138.5	3159	4	0	0	0	0	multi-exon	FALSE	canonical	3	846	junction_2	32.0659043568433	1243	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTGTCTGATGTTGTTGT	18178418	True	NA	21	True	AATAAA	-25	NA	18183827	18209954	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_18185014_18194954_18195036_18206814_18206971_18208218
transcript_83151.known	chr17	+	465	3	FSM	ENSG00000108591.10	ENST00000584212.1	465	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	117.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACAGGCTCTGGACTGAGC	18084058	True	NA	NA	False	NA	NA	NA	18087973	18098464	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_18088088_18093812_18093969_18098269
transcript_83157.nic	chr17	-	4217	30	NIC	ENSG00000177731.16	novel	4181	30	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	3	443	junction_19	139.358228370292	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTATTTTTAATATTAAA	-18258731	False	NA	NA	False	ATTAAA	-25	NA	18258798	18244835	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_18245273_18245353_18245420_18245554_18245661_18245743_18245851_18245933_18246063_18246161_18246223_18246307_18246463_18246593_18246829_18246912_18247053_18247168_18247358_18247656_18247849_18247928_18248034_18248549_18248722_18248799_18248884_18249126_18249202_18249325_18249409_18250837_18251018_18251264_18251478_18251679_18251814_18251998_18252147_18252471_18252557_18253300_18253459_18253543_18253720_18254078_18254183_18254520_18254683_18254768_18254855_18255182_18255264_18256525_18256598_18256908_18257020_18258627
transcript_83160.known	chr17	-	4181	30	FSM	ENSG00000177731.16	ENST00000327031.9	4181	30	0	0	0	0	multi-exon	TRUE	canonical	3	396	junction_19	144.883084604513	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCGCTAATTTTAACAAAA	-18244433	True	NA	NA	False	ATTAAA	-24	NA	18258738	18244814	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_18245273_18245353_18245420_18245554_18245661_18245743_18245851_18245933_18246063_18246161_18246223_18246307_18246463_18246593_18246829_18246912_18247053_18247168_18247358_18247656_18247849_18247928_18248034_18248549_18248722_18248799_18248884_18249126_18249202_18249325_18249409_18250837_18251018_18251264_18251478_18251679_18251817_18251998_18252147_18252471_18252557_18253300_18253459_18253543_18253720_18254078_18254183_18254520_18254683_18254768_18254855_18255182_18255264_18256525_18256598_18256908_18257020_18258627
transcript_83208.known	chr17	+	4212	23	FSM	ENSG00000131899.12	ENST00000316843.9	4212	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.4858035581887	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCATCCACATCTGCTTTA	18218933	True	NA	48	True	AATAAA	-21	NA	18225634	18244875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_18225764_18229940_18230039_18232494_18232577_18232671_18232803_18233777_18233937_18234012_18234176_18234272_18234409_18234648_18234704_18234838_18234994_18235088_18235313_18235469_18235538_18236606_18236761_18236834_18236940_18237480_18237774_18238066_18238215_18238455_18238610_18240577_18240874_18241450_18241716_18241884_18242000_18242165_18242279_18242507_18242629_18242742_18242823_18243907
transcript_83223.nic	chr17	-	2298	18	NIC	ENSG00000177731.16	novel	4181	30	NA	NA	-218	422	combination_of_known_junctions	FALSE	canonical	3	443	junction_7	111.607381532122	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAACAAGAATGAGCGGAAA	-18258889	False	NA	NA	False	NA	NA	NA	18258956	18248704	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_18248722_18248799_18248884_18249126_18249202_18249325_18249409_18250837_18251018_18251264_18251478_18251679_18251814_18251998_18252147_18252471_18252557_18253300_18253459_18253543_18253720_18254078_18254183_18254520_18254683_18254768_18254855_18255182_18255264_18256525_18256598_18256908_18257020_18258627
transcript_83239.known	chr17	+	540	4	FSM	ENSG00000177427.13	ENST00000578621.5	540	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	28.1227468233259	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGGGACCGTGTGACCATC	18259373	True	NA	NA	False	NA	NA	NA	18260644	18263802	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_18260738_18262713_18262868_18263085_18263249_18263672
transcript_83240.known	chr17	+	3236	4	FSM	ENSG00000177427.13	ENST00000323019.9	3236	4	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	5.79271573232759	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCATCTCAGTCTGTTTG	18259390	True	NA	NA	False	AATAAA	-31	NA	18260661	18266552	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_18260738_18262713_18262868_18263085_18263249_18263709
transcript_83242.known	chr17	+	718	3	FSM	ENSG00000177427.13	ENST00000395703.8	718	3	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	2.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGACTCTGGGGCAATG	18259332	True	NA	NA	False	NA	NA	NA	18260603	18263515	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_18260738_18262713_18262868_18263085
transcript_83248.known	chr17	-	2929	19	FSM	ENSG00000177302.15	ENST00000580095.5	2929	19	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_4	15.6627260607571	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTCAGGGTAGGGTAGAG	-18314684	False	NA	NA	False	NA	NA	NA	18314703	18274803	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_18274981_18277674_18278358_18280535_18280659_18282697_18282842_18285141_18285308_18285406_18285521_18290556_18290687_18290841_18291028_18292644_18292853_18294702_18294786_18299558_18299634_18301884_18301986_18302263_18302435_18302579_18302724_18305111_18305221_18306890_18306967_18308350_18308425_18308881_18308942_18314598
transcript_83252.known	chr17	-	3239	18	FSM	ENSG00000177302.15	ENST00000582981.5	3239	18	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_16	36.0409225310037	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCATTTAGTGTCCTGGAA	-18309604	True	NA	NA	False	NA	NA	NA	18315007	18274723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_18274981_18277674_18278358_18280535_18280659_18282697_18282842_18285141_18285308_18285406_18285521_18290556_18290687_18290841_18291028_18292644_18292853_18294702_18294786_18299558_18299634_18301884_18301986_18302263_18302435_18302579_18302724_18305111_18305221_18306890_18306967_18308881_18308942_18314598
transcript_83260.known	chr17	-	727	4	FSM	ENSG00000177302.15	ENST00000583328.5	727	4	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	13.1233464566864	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAATTTAA	-18314755	False	NA	NA	False	NA	NA	NA	18314774	18306549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_18306967_18308350_18308425_18308881_18308942_18314598
transcript_83266.nic	chr17	-	2678	13	NIC	ENSG00000176974.21	novel	2527	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_12	139.046155406517	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTCTCATACTATGTGTT	-18357324	False	NA	-8	True	AATAAA	-19	NA	18363562	18327872	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_18328920_18329277_18329389_18330554_18330672_18333165_18333289_18335558_18335676_18340042_18340256_18340731_18340814_18347495_18347657_18348324_18348441_18353671_18353818_18355885_18356001_18360413_18360553_18363371
transcript_83273.known	chr17	-	2527	12	FSM	ENSG00000176974.21	ENST00000316694.8	2527	12	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_4	69.910095748778	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTCTCATACTATGTGTT	-18357312	True	NA	-8	True	AATAAA	-19	NA	18363550	18327872	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_18328920_18329277_18329389_18330554_18330672_18333165_18333289_18335558_18335676_18340042_18340256_18340731_18340814_18347495_18347657_18348324_18348441_18353671_18353818_18355885_18356001_18363371
transcript_83277.nic	chr17	-	2561	12	NIC	ENSG00000176974.21	novel	2527	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_11	151.030455031783	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTCTCATACTATGTGTT	-18357324	False	NA	-8	True	AATAAA	-19	NA	18363562	18327872	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_18328920_18329277_18329389_18330554_18330672_18333165_18333289_18340042_18340256_18340731_18340814_18347495_18347657_18348324_18348441_18353671_18353818_18355885_18356001_18360413_18360553_18363371
transcript_83286.known	chr17	-	1759	11	FSM	ENSG00000176974.21	ENST00000580002.5	1759	11	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_8	122.432389505392	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGGTCATAATCATTTAG	-18357257	True	NA	-2	True	AATAAA	-14	NA	18363495	18328469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_18328920_18329277_18329389_18330554_18330672_18333165_18333289_18335558_18335676_18340042_18340256_18340731_18340814_18347495_18347657_18353671_18353818_18355885_18356001_18363371
transcript_83287.known	chr17	-	1656	11	FSM	ENSG00000176974.21	ENST00000354098.7	1656	11	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_4	86.234621817458	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACCTGGCTTTCTCACAG	-18357213	True	NA	-9	True	ATTAAA	-12	NA	18363451	18328527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_18328920_18329277_18329389_18330554_18330672_18333165_18333289_18340042_18340256_18340731_18340814_18347495_18347657_18348324_18348441_18353671_18353818_18355885_18356001_18363371
transcript_83299.nnic	chr17	-	2299	10	NIC	ENSG00000176974.21	novel	2527	12	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	97	junction_3	101.810766124047	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTCTCATACTATGTGTT	-18357324	False	NA	-8	True	AATAAA	-19	NA	18363562	18327872	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_18328920_18329277_18329389_18330554_18330672_18340042_18340256_18340731_18340814_18347495_18347657_18348324_18348441_18353671_18353818_18355885_18356001_18363371
transcript_83320.nic	chr17	+	2399	7	NIC	ENSG00000186831.11	novel	1314	8	NA	NA	-43	150	intron_retention	FALSE	canonical	0	0	junction_3	0.942809041582063	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAAATGTGTCCTTGTTC	NA	False	NA	NA	False	AATAAA	-16	NA	18426817	18431998	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_18427362_18428417_18428491_18428921_18429076_18429682_18429845_18430347_18430474_18430559_18430781_18430879
transcript_83321.known	chr17	-	5859	4	FSM	ENSG00000240445.6	ENST00000395675.7	5859	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	2.16024689946929	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTTTCCTTTATTGCT	-18681307	True	NA	1	True	ATTAAA	-16	NA	18682314	18667628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_18673056_18680740_18680830_18681614_18681847_18682203
transcript_83322.nic	chr17	-	3724	4	NIC	ENSG00000240445.6	novel	5859	4	NA	NA	-78	-2300	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	10.8012344973464	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGTTTTGCTTTGCAGA	NA	False	NA	NA	False	AAAAAG	-41	NA	18682392	18669928	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_18673056_18680740_18680830_18681614_18681934_18682203
transcript_83333.nic	chr17	+	2509	11	NIC	ENSG00000108448.23	novel	1703	10	NA	NA	0	0	intron_retention	FALSE	canonical	1	2	junction_6	4.9598387070549	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGCCAGATACCGTTCTT	18697584	True	NA	15	True	AATAAA	-22	NA	18697997	18736118	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_18698115_18699153_18699276_18699359_18699458_18701356_18701446_18704618_18704766_18705062_18705165_18722236_18722333_18727524_18727759_18731069_18731236_18732038_18732135_18734876
transcript_83339.known	chr17	+	1809	9	FSM	ENSG00000108448.23	ENST00000572555.5	1809	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	4.11551940828858	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGACGGAGTCTCGCACT	18697584	True	NA	NA	False	NA	NA	NA	18697997	18735667	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_18698115_18699153_18699276_18699359_18699458_18701356_18701446_18722236_18722333_18727524_18727759_18731069_18731236_18732038_18732135_18734876
transcript_83342.known	chr17	+	1049	7	FSM	ENSG00000171928.14	ENST00000574294.5	1049	7	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_3	142.214235886879	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTTGCATTTTGATCCA	NA	False	NA	NA	False	AATGAA	-26	NA	18781110	18805895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_18781306_18789352_18789436_18790895_18790961_18797578_18797669_18798811_18798944_18804137_18804267_18805540
transcript_83343.known	chr17	+	1876	7	FSM	ENSG00000171928.14	ENST00000307767.13	1876	7	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	49.2375195692607	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACATGTGTAATCTCAT	18778981	True	NA	NA	False	TATAAA	-21	NA	18781182	18806714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_18781306_18789352_18789436_18790895_18791041_18797578_18797669_18798811_18798944_18804137_18804267_18805540
transcript_83347.known	chr17	+	2989	7	FSM	ENSG00000171928.14	ENST00000476139.5	2989	7	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	110.38832969718	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACATGTGTAATCTCAT	18779112	True	NA	NA	False	TATAAA	-21	NA	18781313	18806714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_18782550_18789352_18789436_18790895_18791041_18797578_18797669_18798811_18798944_18804137_18804267_18805540
transcript_83350.known	chr17	+	718	6	FSM	ENSG00000171928.14	ENST00000571018.5	718	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	142.060550470565	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGCTTTGTTTTTCCAC	NA	False	NA	NA	False	NA	NA	NA	18781142	18805661	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_18781306_18789352_18789436_18797578_18797669_18798811_18798944_18804137_18804267_18805540
transcript_83357.nic	chr17	+	2022	13	NIC	ENSG00000141127.15	novel	1958	12	NA	NA	0	-53	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	129.747912635747	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGTTTTGGCAATCGT	18852097	True	NA	31	True	AATAAA	-28	NA	18858130	18931215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_18858262_18859339_18859476_18865468_18865565_18865801_18865953_18867281_18867335_18872582_18872650_18877697_18877871_18882567_18882684_18889821_18889878_18911102_18911252_18923913_18923985_18928810_18928958_18930539
transcript_83369.known	chr17	+	1958	12	FSM	ENSG00000141127.15	ENST00000268835.7	1958	12	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	70.6441437156847	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCATCAGCTTGTTTTCT	18852097	True	NA	35	True	AATAAA	-36	NA	18858130	18931287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_18858262_18865468_18865565_18865801_18865953_18867281_18867335_18872582_18872650_18877697_18877871_18882567_18882684_18889821_18889878_18911102_18911252_18923913_18923985_18928810_18928958_18930539
transcript_83379.known	chr17	+	1835	11	FSM	ENSG00000141127.15	ENST00000492129.5	1835	11	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	138.854204113523	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGCTGTGAATGTTGAAAT	18855835	True	NA	16	True	AATAAA	-17	NA	18856349	18931268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_18856430_18865468_18865565_18865801_18865953_18872582_18872650_18877697_18877871_18882567_18882684_18889821_18889878_18911102_18911252_18923913_18923985_18928810_18928958_18930539
transcript_8338.known	chr1	+	1335	10	FSM	ENSG00000126088.14	ENST00000651476.1	1335	10	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	308.344844629964	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTGTAGTTTTGTTTG	45005163	True	NA	15	True	AATAAA	-16	NA	45012161	45015575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45012286_45012856_45013020_45013135_45013216_45013291_45013355_45013593_45013792_45013908_45014071_45014438_45014577_45014735_45014837_45014939_45015007_45015336
transcript_83391.nic	chr17	+	1807	11	NIC	ENSG00000141127.15	novel	1958	12	NA	NA	10	-53	combination_of_known_junctions	FALSE	canonical	3	108	junction_1	77.2207873567733	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGTTTTGGCAATCGT	18852080	True	NA	31	True	AATAAA	-28	NA	18858113	18931215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_18858262_18865801_18865953_18867281_18867335_18872582_18872650_18877697_18877871_18882567_18882684_18889821_18889878_18911102_18911252_18923913_18923985_18928810_18928958_18930539
transcript_83392.nic	chr17	+	1860	11	NIC	ENSG00000141127.15	novel	1958	12	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	108	junction_1	77.2207873567733	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGCTGTGAATGTTGAAAT	18852080	True	NA	16	True	AATAAA	-17	NA	18858113	18931268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_18858262_18865801_18865953_18867281_18867335_18872582_18872650_18877697_18877871_18882567_18882684_18889821_18889878_18911102_18911252_18923913_18923985_18928810_18928958_18930539
transcript_8340.known	chr1	+	1193	10	FSM	ENSG00000126088.14	ENST00000246337.9	1193	10	0	0	0	0	multi-exon	FALSE	canonical	3	825	junction_1	80.2493029083988	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTGTAGTTTTGTTTG	45005255	True	NA	15	True	AATAAA	-16	NA	45012253	45015575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45012286_45012906_45013020_45013135_45013216_45013291_45013355_45013593_45013792_45013908_45014071_45014438_45014577_45014735_45014837_45014939_45015007_45015336
transcript_83405.known	chr17	+	1540	10	FSM	ENSG00000141127.15	ENST00000395656.6	1540	10	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	123.031261710285	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGTTAATAAAATAA	18852103	True	NA	NA	False	NA	NA	NA	18858136	18931024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_18858262_18865801_18865953_18872582_18872650_18877697_18877871_18882567_18882684_18889821_18889878_18911102_18911252_18923913_18923985_18928810_18928958_18930539
transcript_83416.known	chr17	-	5226	6	FSM	ENSG00000188522.15	ENST00000388995.11	5226	6	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_3	15.6767343538123	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGTTGTTATTGAATCT	-19003609	True	NA	0	True	AATAAA	-30	NA	19004764	18968788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_18971749_18977583_18978851_18979548_18979674_18988246_18988415_19003519_19004170_19004708
transcript_83418.known	chr17	-	1988	5	FSM	ENSG00000154016.14	ENST00000284154.10	1988	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.11803398874989	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGACTGCTTTGGTGCTG	NA	False	NA	-5	True	AGTAAA	-44	NA	19046957	19020655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_19022145_19024214_19024384_19035957_19036081_19041806_19041905_19046848
transcript_83425.known	chr17	+	4664	10	FSM	ENSG00000072134.16	ENST00000347697.6	4664	10	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_8	20.1218510303821	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGGTTTCTGGCTGTGTCC	19231352	True	NA	29	True	TATAAA	-25	NA	19237376	19336715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_19237532_19281954_19282078_19282949_19283715_19309884_19309998_19312051_19312145_19313104_19313280_19328710_19328888_19329560_19329648_19331852_19332069_19333955
transcript_83435.nic	chr17	+	3012	9	NIC	ENSG00000072134.16	novel	4664	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_8	62.1711347813437	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGGTTTCTGGCTGTGTCC	19231339	True	NA	29	True	TATAAA	-25	NA	19237363	19336715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_19237532_19281954_19282078_19282949_19283715_19309884_19309998_19312051_19312145_19313104_19313280_19328710_19328888_19329560_19329648_19335404
transcript_83441.known	chr17	+	1657	8	FSM	ENSG00000072134.16	ENST00000395628.6	1657	8	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_5	17.026989380009	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAACAGGTATGTACA	19231372	True	NA	NA	False	ATTAAA	-36	NA	19237396	19329636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_19237532_19281954_19282078_19282949_19283715_19309884_19309998_19312051_19312145_19313104_19313280_19328710_19328888_19329560
transcript_83448.nnic	chr17	+	3410	7	NIC	ENSG00000072134.16	novel	1657	8	NA	NA	-2	-442	intron_retention	FALSE	canonical	3	18	junction_5	73.1254629614974	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATTGCCCATGCCTAGC	19231339	True	NA	NA	False	AGTAAA	-28	NA	19237363	19331531	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_19237532_19281954_19282078_19282949_19283715_19309884_19309998_19312051_19312145_19328710_19328888_19329560
transcript_83452.known	chr17	+	4871	11	FSM	ENSG00000072134.16	ENST00000314728.10	4846	11	-25	0	-25	0	multi-exon	FALSE	canonical	2	3	junction_3	80.634297913481	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGGTTTCTGGCTGTGTCC	19231316	True	NA	29	True	TATAAA	-25	NA	19237340	19336715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_19237532_19281954_19282078_19282949_19283715_19285619_19285791_19309884_19309998_19312051_19312145_19313104_19313280_19328710_19328888_19329560_19329648_19331852_19332069_19333955
transcript_83453.nic	chr17	+	1259	5	ISM	ENSG00000072134.16	ENST00000395628.6	1657	8	-33	17495	-2	-1593	5prime_fragment	FALSE	canonical	3	195	junction_1	11.7765657133139	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTAAGAGCTTGCTGGGA	19231339	True	NA	19	True	AAAAAG	-4	NA	19237363	19312141	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_19237532_19281954_19282078_19282949_19283715_19309884_19309998_19312051
transcript_83455.known	chr17	+	639	4	FSM	ENSG00000072134.16	ENST00000581024.5	639	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	104.888300374997	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGACCGAGATTGCCGA	19231394	True	NA	NA	False	NA	NA	NA	19237418	19283233	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_19237532_19279861_19279981_19281954_19282078_19282949
transcript_83456.known	chr17	+	309	3	FSM	ENSG00000072134.16	ENST00000582969.5	309	3	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	16	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TATAACAAAGAAAATAAAAA	19231472	True	NA	NA	False	TTTAAA	-3	NA	19237496	19283100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_19237532_19281954_19282078_19282949
transcript_83458.known	chr17	+	591	2	FSM	ENSG00000072134.16	ENST00000577692.5	591	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCGGGAGAACATCTTCGC	19231371	True	NA	NA	False	NA	NA	NA	19237395	19283404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_19237532_19282949
transcript_83464.known	chr17	+	3149	7	FSM	ENSG00000166484.20	ENST00000308406.9	3149	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	76.1985709985576	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCAGGTGTAATTTTTGG	NA	False	NA	12	True	AATACA	-20	NA	19377720	19383543	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_19378102_19378895_19379133_19379781_19379948_19380607_19381687_19381780_19382467_19382812_19382947_19383077
transcript_83466.nic	chr17	+	3676	7	NIC	ENSG00000166484.20	novel	3149	7	NA	NA	-10	0	intron_retention	FALSE	canonical	3	34	junction_1	94.0025117867721	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGACTCCAGGTGTAATT	19377654	True	NA	7	True	AATACA	-15	NA	19377742	19383538	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_19378102_19378895_19379133_19379781_19380502_19380607_19381687_19381780_19382467_19382812_19382947_19383077
transcript_83467.known	chr17	+	3059	7	FSM	ENSG00000166484.20	ENST00000395602.8	3059	7	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	47.1925723910966	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGGTGTAATTTTTGGA	19378213	True	NA	13	True	AATACA	-21	NA	19378252	19383544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_19378543_19378895_19379133_19379781_19379948_19380607_19381687_19381780_19382467_19382812_19382947_19383077
transcript_83469.known	chr17	+	2902	7	FSM	ENSG00000166484.20	ENST00000395604.8	2902	7	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	61.4367334924491	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGGTGTAATTTTTGGA	19374725	True	NA	13	True	AATACA	-21	NA	19378497	19383544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_19378631_19378895_19379133_19379781_19379948_19380607_19381687_19381780_19382467_19382812_19382947_19383077
transcript_8347.nic	chr1	+	1356	9	NIC	ENSG00000126088.14	novel	1335	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	63	junction_1	326.197696956922	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTGTAGTTTTGTTTG	45005218	True	NA	15	True	AATAAA	-16	NA	45012216	45015575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_45012286_45012856_45013020_45013135_45013355_45013593_45013792_45013908_45014071_45014438_45014577_45014735_45014837_45014939_45015007_45015336
transcript_83472.nic	chr17	-	3045	7	NIC	ENSG00000108641.20	novel	3617	8	NA	NA	-32	190	combination_of_known_junctions	TRUE	canonical	2	5	junction_1	90.130306901853	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTGAGTCACATTCATAC	-19361011	False	NA	NA	False	AATAAA	-24	NA	19362765	19335371	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_19337749_19343789_19343858_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
transcript_83473.known	chr17	-	923	7	FSM	ENSG00000108641.20	ENST00000461069.6	923	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	88.2798580273741	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCCACCTTCTGTATATT	-19360860	True	NA	-6	True	AATAAA	-13	NA	19362614	19340920	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_19341327_19343789_19343858_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
transcript_83475.nic	chr17	-	989	7	NIC	ENSG00000108641.20	novel	913	7	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	89.7601742917698	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTAGGCCTGGGGCTGCCT	-19361011	False	NA	-8	True	AATAAA	-17	NA	19362765	19343174	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_19343496_19343789_19343858_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
transcript_83480.known	chr17	-	1031	7	FSM	ENSG00000108641.20	ENST00000261499.11	913	7	0	-118	0	0	multi-exon	FALSE	canonical	3	174	junction_1	28.5345794120436	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGCTGCCAGGAGACCAG	-19360969	True	NA	NA	False	NA	NA	NA	19362723	19343056	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_19343462_19343789_19343858_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
transcript_83481.nic	chr17	-	835	7	NIC	ENSG00000108641.20	novel	744	7	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	82.4439203337638	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGCCTAGGCCTGGGGCT	-19360988	True	NA	-12	True	AATAAA	-13	NA	19362742	19343178	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_19343462_19343789_19343858_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362599
transcript_83482.known	chr17	-	733	7	FSM	ENSG00000108641.20	ENST00000395616.7	733	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	86.4299652255448	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCGTTCTCAGGGCTTTGT	-19360979	True	NA	NA	False	NA	NA	NA	19362733	19343453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_19343551_19343789_19343858_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
transcript_83491.known	chr17	-	2726	6	FSM	ENSG00000108641.20	ENST00000675510.1	2726	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	98.5129433120339	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCACGCCCTCGGGACAA	-19360950	True	NA	NA	False	NA	NA	NA	19362704	19335561	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_19337749_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
transcript_83493.known	chr17	-	1346	6	FSM	ENSG00000108641.20	ENST00000647252.1	1346	6	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_1	11.4960862905599	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGCTGCCAGGAGACCAG	-19360956	True	NA	NA	False	NA	NA	NA	19362710	19343056	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_19343858_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
transcript_83494.known	chr17	-	593	6	FSM	ENSG00000108641.20	ENST00000575478.7	593	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	89.8318429066219	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCAGGGTTGGGGTGAAT	-19360967	True	NA	NA	False	NA	NA	NA	19362721	19343727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_19343858_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362599
transcript_83497.known	chr17	-	601	6	FSM	ENSG00000108641.20	ENST00000440841.1	601	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	89.3657652571722	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGCAGTATGAGTCAGAC	-19360788	False	NA	-18	True	ATTAAA	-19	NA	19362542	19346949	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_19347174_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
transcript_83498.known	chr17	-	1932	6	FSM	ENSG00000166482.12	ENST00000395592.6	1932	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	22.1503950303375	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCAGGGGGAGTTGGGG	-19386707	True	NA	1	True	AATAAA	-20	NA	19387190	19383441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_19384710_19385098_19385282_19385357_19385455_19386309_19386465_19386759_19386839_19387040
transcript_83499.known	chr17	-	1820	6	FSM	ENSG00000166482.12	ENST00000299610.5	1820	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_5	8.01498596380555	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGTTCAGGGGGAGTTG	-19386707	True	NA	-2	True	AATAAA	-17	NA	19387190	19383444	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_19384710_19385098_19385282_19385357_19385455_19386309_19386465_19386759_19386839_19387149
transcript_8350.known	chr1	+	1102	9	FSM	ENSG00000126088.14	ENST00000636293.1	1102	9	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_6	342.474725344806	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTGTAGTTTTGTTTG	45005208	True	NA	15	True	AATAAA	-16	NA	45012206	45015575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45012286_45012906_45013020_45013135_45013216_45013291_45013355_45013593_45013792_45013908_45014071_45014735_45014837_45014939_45015007_45015336
transcript_83501.known	chr17	+	2715	5	FSM	ENSG00000166484.20	ENST00000299612.11	2715	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	102.720494547096	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGGTGTAATTTTTGGA	19377664	True	NA	13	True	AATACA	-21	NA	19377752	19383544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_19378102_19380607_19381687_19381780_19382467_19382812_19382947_19383077
transcript_83502.nic	chr17	+	2437	5	NIC	ENSG00000166484.20	novel	3059	7	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	99.3956739501272	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGACTCCAGGTGTAATT	19374693	True	NA	7	True	AATACA	-15	NA	19378465	19383538	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_19378543_19380607_19381687_19381780_19382467_19382812_19382947_19383077
transcript_83505.known	chr17	+	640	2	FSM	ENSG00000166484.20	ENST00000482850.1	640	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTCAGCAGCTGCTGCCC	19374736	True	NA	NA	False	NA	NA	NA	19378508	19381213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_19378543_19380607
transcript_83506.known	chr17	-	755	6	FSM	ENSG00000108641.20	ENST00000268841.10	755	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	97.3192683901806	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTATGAGTCAGACACCT	-19360915	True	NA	-14	True	ATTAAA	-23	NA	19362669	19346945	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_19347197_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
transcript_83507.known	chr17	-	883	1	FSM	ENSG00000189343.7	ENST00000458332.1	883	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTTTTTATACAAGAAAAAT	-19445837	False	NA	NA	False	NA	NA	NA	19446852	19445969	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_19446000_19446900
transcript_83508.known	chr17	+	3280	17	FSM	ENSG00000142494.13	ENST00000270570.8	3280	17	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_10	3.76662979332984	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCCTCTACATTTTTGA	19533705	True	NA	11	True	AATAAA	-15	NA	19533853	19579034	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_19534075_19542392_19542495_19546434_19546504_19547984_19548134_19549634_19549678_19551423_19551469_19555211_19555310_19555592_19555691_19555795_19555910_19555994_19556063_19560187_19560297_19560417_19560494_19566789_19566860_19567095_19567229_19571477_19571573_19572779_19572862_19577326
transcript_83518.known	chr17	+	1755	1	FSM	ENSG00000142494.13	ENST00000574596.1	1755	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGGGCATGGTGGCAG	19533711	True	NA	NA	False	AATAAA	-10	NA	19533859	19535614	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_19533900_19535600
transcript_8352.known	chr1	+	1177	9	FSM	ENSG00000126088.14	ENST00000652287.1	1177	9	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	334.045819274841	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTGTAGTTTTGTTTG	45005208	True	NA	15	True	AATAAA	-16	NA	45012206	45015575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45012286_45012906_45013020_45013135_45013216_45013593_45013792_45013908_45014071_45014438_45014577_45014735_45014837_45014939_45015007_45015336
transcript_83522.known	chr17	+	3183	11	FSM	ENSG00000072210.19	ENST00000581518.6	3183	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	156.867332481942	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTATGCCTTGGAGCTC	NA	False	NA	NA	False	NA	NA	NA	19648135	19677130	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_19648266_19648934_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19671720_19671957_19675557
transcript_83524.known	chr17	+	3828	11	FSM	ENSG00000072210.19	ENST00000339618.8	3828	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_9	195.273654136957	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTATTTGTCAACTTTT	19640089	True	NA	25	True	TATAAA	-22	NA	19648750	19677596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19671720_19671957_19673150_19673276_19675557
transcript_83530.known	chr17	+	1708	11	FSM	ENSG00000072210.19	ENST00000672357.1	1708	11	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	151.924619466366	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGTAAGAAAATATGCAAAC	19648684	False	NA	-76	True	AATGAA	-28	NA	19648722	19675664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_19648844_19648934_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19671720_19671957_19675557
transcript_83536.known	chr17	+	3703	10	FSM	ENSG00000072210.19	ENST00000176643.11	3703	10	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_9	81.0442646922419	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTATTTGTCAACTTTT	19640089	True	NA	25	True	TATAAA	-22	NA	19648750	19677596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19671720_19671957_19675557
transcript_83542.known	chr17	+	2060	10	FSM	ENSG00000072210.19	ENST00000671878.1	2060	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	162.663554918628	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGTTCTGGTGTTTAT	19640119	True	NA	NA	False	NA	NA	NA	19648780	19685700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19671720_19671957_19685274
transcript_83547.known	chr17	+	1558	9	FSM	ENSG00000072210.19	ENST00000630662.2	1558	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_8	172.528937790157	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACGTCCCAACATTCCC	19640144	False	NA	2	True	AATAAA	-13	NA	19648805	19675742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19675557
transcript_83549.known	chr17	+	1524	9	FSM	ENSG00000072210.19	ENST00000672567.1	1524	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_8	174.901356126818	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGTTCTGGTGTTTAT	19649063	False	NA	NA	False	NA	NA	NA	19649080	19685700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19685274
transcript_83552.known	chr17	+	3276	8	FSM	ENSG00000072210.19	ENST00000395575.7	3276	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	183.917572486665	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGGAGACAATCCTTTGA	19640124	True	NA	-40	True	NA	NA	NA	19648785	19677531	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19661126_19661269_19663332_19663500_19664947_19665048_19671720_19671957_19675557
transcript_83556.known	chr17	-	3908	28	FSM	ENSG00000083290.20	ENST00000361658.6	3908	28	0	0	0	0	multi-exon	TRUE	canonical	2	14	junction_1	7.93180813225544	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTAAGTGTTCCTGTTTG	-19867672	True	NA	-1	True	AATAAA	-22	NA	19867936	19770829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_19771068_19776308_19776408_19777580_19777717_19780471_19780630_19780985_19781105_19781888_19782068_19783696_19783906_19785936_19786087_19795621_19795726_19796094_19796283_19797395_19797683_19799494_19799576_19801776_19801923_19804692_19804831_19810377_19810439_19816748_19816921_19825093_19825183_19826138_19826187_19838500_19838584_19841488_19841548_19843120_19843223_19845303_19845378_19846736_19846911_19849368_19849406_19849741_19849775_19864802_19864845_19865735_19865829_19867327
transcript_83559.known	chr17	-	9149	27	FSM	ENSG00000083290.20	ENST00000395544.9	9149	27	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_15	6.97417043485731	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTAAGTGTTCCTGTTTG	-19867672	True	NA	-1	True	AATAAA	-22	NA	19867936	19770829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_19776408_19777580_19777717_19780471_19780630_19780985_19781105_19781888_19782068_19783696_19783906_19785936_19786087_19795621_19795726_19796094_19796283_19797395_19797683_19799494_19799576_19801776_19801923_19804692_19804831_19810377_19810439_19816748_19816921_19825093_19825183_19826138_19826187_19838500_19838584_19841488_19841548_19843120_19843223_19845303_19845378_19846736_19846911_19849368_19849406_19849741_19849775_19864802_19864845_19865735_19865829_19867327
transcript_83566.known	chr17	-	4063	15	FSM	ENSG00000108599.15	ENST00000225737.11	4063	15	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_6	12.969351627304	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGACTCGGCTACTTTT	-19974272	True	NA	NA	False	TATAAA	-16	NA	19977828	19904301	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_19906233_19909180_19909277_19909925_19909979_19920035_19920119_19924407_19924518_19931804_19931979_19936285_19936431_19939712_19939850_19940886_19941011_19941825_19941911_19947406_19947506_19958013_19958572_19962839_19963023_19968413_19968462_19977591
transcript_83570.known	chr17	-	1815	14	FSM	ENSG00000108599.15	ENST00000395536.7	1815	14	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	38.0445083472584	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAAAACTTGAGATAAAGG	-19977667	False	NA	NA	False	NA	NA	NA	19977679	19906226	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_19906233_19909180_19909277_19909925_19909979_19920035_19920119_19924407_19924518_19936285_19936431_19939712_19939850_19940886_19941011_19941825_19941911_19947406_19947506_19958013_19958572_19962839_19963023_19968413_19968462_19977591
transcript_83576.known	chr17	+	3363	15	FSM	ENSG00000128487.19	ENST00000395527.9	8255	15	4	4888	-1	-483	multi-exon	FALSE	canonical	1	2	junction_3	86.8142516279112	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCCTGCTCTGCCCACCA	20008986	True	NA	NA	False	NA	NA	NA	20009362	20314138	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_20009425_20096630_20096799_20110426_20110563_20204332_20205913_20227412_20227621_20231757_20231832_20232199_20232406_20245925_20246072_20247218_20247320_20253504_20253587_20257450_20257608_20260191_20260295_20296960_20297078_20306022_20306083_20313975
transcript_83579.known	chr17	+	3754	13	FSM	ENSG00000128487.19	ENST00000680373.1	3754	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	67.4596587269425	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACAACAAAACAC	20149763	True	NA	-43	True	NA	NA	NA	20156050	20314700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_20156237_20204332_20205913_20227412_20227621_20231757_20231832_20232199_20232415_20245925_20246072_20247218_20247320_20253504_20253587_20257450_20257608_20260191_20260295_20296960_20297078_20306022_20306083_20313975
transcript_83586.nic	chr17	+	3743	12	NIC	ENSG00000128487.19	novel	8133	13	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_10	66.0541976318946	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGTTCCAGGGCAACC	NA	False	NA	-14	True	AAAACA	-19	NA	20155964	20314729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_20156237_20204332_20205913_20227412_20227621_20231757_20231832_20232199_20232406_20245925_20246072_20247218_20247320_20253504_20253587_20257450_20257608_20260191_20260295_20306022_20306083_20313975
transcript_83587.known	chr17	+	2167	12	FSM	ENSG00000128487.19	ENST00000681731.1	2167	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	67.6647056942851	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACAACAAAACAC	20149770	True	NA	-43	True	NA	NA	NA	20156057	20314700	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_20156237_20227412_20227621_20231757_20231832_20232199_20232415_20245925_20246072_20247218_20247320_20253504_20253587_20257450_20257608_20260191_20260295_20296960_20297078_20306022_20306083_20313975
transcript_83594.nic	chr17	+	2158	11	NIC	ENSG00000128487.19	novel	2251	12	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_9	66.1483181947962	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGTTCCAGGGCAACC	NA	False	NA	-14	True	AAAACA	-19	NA	20155969	20314729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_20156237_20227412_20227621_20231757_20231832_20232199_20232406_20245925_20246072_20247218_20247320_20253504_20253587_20257450_20257608_20260191_20260295_20306022_20306083_20313975
transcript_83599.known	chr17	+	2536	6	FSM	ENSG00000128487.19	ENST00000395525.7	2536	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	85.1694781010193	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACAAGTCTTATGAAAAGT	20149801	True	NA	NA	False	AATAAA	-23	NA	20156088	20237179	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_20156237_20204332_20205913_20227412_20227621_20231757_20231832_20232199_20232406_20236859
transcript_83601.known	chr17	+	3081	5	FSM	ENSG00000128487.19	ENST00000679740.1	3081	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	92.3752537208965	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAGACGTGTGAAGAAAAA	20149770	True	NA	NA	False	NA	NA	NA	20156057	20239273	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_20156237_20227412_20227621_20231757_20231832_20232199_20232406_20236859
transcript_83602.nic	chr17	+	581	2	ISM	ENSG00000128487.19	ENST00000395525.7	2536	6	-124	32538	-24	-97	5prime_fragment	FALSE	canonical	3	105	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTCTGAACGCTGAGGGG	NA	False	NA	NA	False	AATACA	-10	NA	20155964	20204641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_20156237_20204332
transcript_83604.nic	chr17	+	1113	2	ISM	ENSG00000128487.19	ENST00000395525.7	2536	6	-124	32006	-24	435	5prime_fragment	FALSE	canonical	3	105	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGATACAAAAGATGGAAG	NA	False	NA	8	True	NA	NA	NA	20155964	20205173	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_20156237_20204332
transcript_83605.nic	chr17	+	1543	2	ISM	ENSG00000128487.19	ENST00000395525.7	2536	6	-124	31576	-24	865	5prime_fragment	FALSE	canonical	3	105	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAATGAGTTTCTAGAACT	NA	False	NA	NA	False	ATTAAA	-25	NA	20155964	20205603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_20156237_20204332
transcript_83606.known	chr17	+	4060	16	FSM	ENSG00000128487.19	ENST00000677914.1	4060	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	93.9557815618011	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCCAGGGCAACCTGGAAA	20009002	True	NA	-8	True	AATAAA	-6	NA	20009378	20314735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_20009425_20017986_20018103_20096630_20096799_20110426_20110563_20204332_20205913_20227412_20227621_20231757_20231832_20232199_20232406_20245925_20246072_20247218_20247320_20253504_20253587_20257450_20257608_20260191_20260295_20296960_20297078_20306022_20306083_20313975
transcript_83607.known	chr17	-	1184	1	FSM	ENSG00000261033.1	ENST00000564549.1	1184	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTTTTTTTTTTAAAT	-20009175	True	NA	NA	False	AATAAA	-36	NA	20009234	20008050	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_20008000_20009200
transcript_83614.nic	chr17	+	1546	4	FSM	ENSG00000233098.10	ENST00000692309.1	1488	4	-53	-5	1	0	multi-exon	FALSE	canonical	3	78	junction_2	37.9502598439355	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGAATGTGATCTCT	20862680	True	NA	NA	False	AATAAA	-29	NA	20868433	20930046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_20868686_20892229_20892433_20924358_20924834_20929430
transcript_83615.known	chr17	+	3727	4	FSM	ENSG00000233098.10	ENST00000577537.5	3727	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	31.6789449880446	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTACTTGATCTTTGTGGG	20862679	True	NA	NA	False	AATAAA	-20	NA	20868432	20905230	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_20868686_20887591_20887850_20892229_20892433_20902217
transcript_83618.known	chr17	+	709	4	FSM	ENSG00000233098.10	ENST00000417232.6	709	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	17.1464281994822	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATACAATGAAAAGGAAAAAA	20862751	True	NA	NA	False	NA	NA	NA	20868504	20924425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_20868686_20887591_20887850_20892229_20892433_20924358
transcript_83619.known	chr17	+	1257	3	FSM	ENSG00000233098.10	ENST00000443508.8	1293	3	36	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	56.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGAATGTGATCTCT	20862766	True	NA	NA	False	AATAAA	-29	NA	20868519	20930046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_20868686_20924358_20924834_20929430
transcript_83622.known	chr17	+	3382	3	FSM	ENSG00000233098.10	ENST00000583962.2	3382	3	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_2	24.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTACTTGATCTTTGTGGG	20862766	True	NA	NA	False	AATAAA	-20	NA	20868519	20905230	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_20868686_20892229_20892433_20902217
transcript_83636.known	chr17	-	5189	13	FSM	ENSG00000124422.12	ENST00000261497.9	5189	13	0	0	0	0	multi-exon	FALSE	canonical	3	765	junction_10	55.5689636597824	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGGCCAGTTTTCCTTT	-21026352	True	NA	-6	True	AATAAA	-17	NA	21043011	20999595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_21003074_21004201_21004352_21004927_21004991_21006895_21006988_21007869_21007997_21011150_21011310_21012829_21012936_21015751_21015900_21017941_21018112_21019083_21019186_21021112_21021227_21028541_21028675_21042664
transcript_83637.known	chr17	-	1906	13	FSM	ENSG00000124422.12	ENST00000579645.5	1906	13	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_12	235.577113465822	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCCCTGGCCCCCCCCTC	NA	False	NA	NA	False	AAAACA	-33	NA	21043760	21002971	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_21003074_21004201_21004352_21004927_21004991_21006895_21006988_21007869_21007997_21011150_21011310_21012829_21012936_21015751_21015900_21017941_21018112_21019083_21019186_21021112_21021227_21028541_21028675_21043320
transcript_83642.nic	chr17	-	4804	13	NIC	ENSG00000124422.12	novel	5189	13	NA	NA	-57	-148	intron_retention	FALSE	canonical	3	53	junction_12	226.96088441746	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAATGACTGTGCTGTGG	-21042312	False	NA	-14	True	AATAAA	-15	NA	21042330	20999744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_21003074_21004201_21004352_21004927_21004991_21006895_21006988_21007869_21007997_21011150_21011310_21012829_21012936_21015751_21015900_21017941_21018112_21019083_21019186_21021112_21021227_21028541_21028675_21042219
transcript_83661.known	chr17	+	1910	1	FSM	ENSG00000109016.18	ENST00000581020.1	1910	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	21125251	True	NA	NA	False	NA	NA	NA	21126963	21128873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_21127000_21128900
transcript_83662.known	chr17	-	1246	3	FSM	ENSG00000178307.10	ENST00000577419.5	1246	3	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_2	2	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTCCCGCTGTTCTCTC	-21204753	True	NA	-9	True	ATTAAA	-13	NA	21214161	21197957	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_21198841_21210935_21211228_21214090
transcript_83663.known	chr17	-	958	2	FSM	ENSG00000178307.10	ENST00000317635.6	958	2	0	0	0	0	multi-exon	FALSE	canonical	3	554	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCGCTGTTCTCTCTTTC	-21204753	True	NA	-5	True	ATTAAA	-17	NA	21214161	21197953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_21198841_21214090
transcript_83664.known	chr17	-	4931	3	FSM	ENSG00000274180.1	ENST00000611551.1	4931	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	2	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGCTCTCTGGTTTTCTGT	-21252709	True	NA	-1	True	ATTAAA	-24	NA	21253410	21238869	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_21243430_21244105_21244225_21253158
transcript_83669.known	chr17	+	2401	13	FSM	ENSG00000034152.19	ENST00000395491.6	2401	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	60.4595250284574	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	21282675	True	NA	65	True	NA	NA	NA	21284671	21315213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_21284970_21296085_21296211_21298412_21298480_21298877_21298927_21300544_21300659_21300873_21300994_21302142_21302260_21303182_21303235_21304425_21304554_21305050_21305129_21312141_21312282_21313491_21313538_21314146
transcript_83671.known	chr17	+	2256	12	FSM	ENSG00000034152.19	ENST00000342679.9	2256	12	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	15.6321347346943	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTAAAGGTTGTGTGAGA	21282714	True	NA	84	True	ATTAAA	-17	NA	21284710	21315232	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_21284970_21298412_21298480_21298877_21298927_21300544_21300659_21300873_21300994_21302142_21302260_21303182_21303235_21304425_21304554_21305050_21305129_21312141_21312282_21313491_21313538_21314146
transcript_83675.nnic	chr17	+	2148	11	NIC	ENSG00000034152.19	novel	2256	12	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_9	45.2509668404997	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTAAAGGTTGTGTGAGA	21282682	True	NA	84	True	ATTAAA	-17	NA	21284678	21315232	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_21284970_21298412_21298480_21298877_21298927_21300544_21300659_21300873_21300994_21302142_21302260_21303182_21303235_21304425_21304554_21305050_21305129_21313491_21313538_21314146
transcript_83677.known	chr17	+	5263	3	FSM	ENSG00000184185.10	ENST00000583088.6	5263	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0.5	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCCCTGTGTTGAGATGT	21376227	True	NA	6	True	ATTAAA	-20	NA	21376356	21419870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_21376914_21408518_21408641_21415286
transcript_83679.known	chr17	-	7032	3	FSM	ENSG00000212719.14	ENST00000669595.1	7032	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCCCTGTCTCTTTTCT	-21550906	True	NA	-64	True	NA	NA	NA	21551680	21529285	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_21535539_21546705_21546800_21550995
transcript_83681.known	chr17	-	6975	2	FSM	ENSG00000212719.14	ENST00000666869.1	6975	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTCAATAAAATTTAGTTT	-21550915	True	NA	-36	True	NA	NA	NA	21551689	21529257	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_21535539_21550995
transcript_83683.known	chr17	-	2519	3	FSM	ENSG00000212719.14	ENST00000659749.1	2519	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	18.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTCACTTTATGGATTT	-21550895	True	NA	NA	False	AATAAA	-3	NA	21551669	21527376	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_21529111_21535427_21535539_21550995
transcript_83691.nnic	chr17	+	2289	10	NNC	ENSG00000109046.15	novel	4187	9	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_6	172.707702831356	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTAGCCAGGCGTGGTG	27281810	True	NA	NA	False	AATACA	-10	NA	27294066	27312887	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_27294436_27301787_27301957_27303366_27303636_27304779_27304912_27306781_27306883_27307743_27307920_27309099_27309273_27310060_27310175_27311508_27311617_27312209
transcript_83692.nnic	chr17	+	2857	10	NNC	ENSG00000109046.15	novel	4187	9	NA	NA	-9	-176	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_6	172.707702831356	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTTCTGCAGGGGATG	27281810	True	NA	93	True	TTTAAA	-15	NA	27294066	27313455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_27294436_27301787_27301957_27303366_27303636_27304779_27304912_27306781_27306883_27307743_27307920_27309099_27309273_27310060_27310175_27311508_27311617_27312209
transcript_83703.known	chr17	+	4187	9	FSM	ENSG00000109046.15	ENST00000467843.6	4187	9	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_5	107.142136902341	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTATATTGCAAATGTTTC	27281836	True	NA	38	True	ATTAAA	-20	NA	27294092	27313631	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_27294436_27301787_27301957_27303366_27303636_27304779_27304912_27306781_27306883_27307743_27309273_27310060_27310175_27311508_27311617_27312209
transcript_83706.known	chr17	+	5105	9	FSM	ENSG00000109046.15	ENST00000262394.7	5105	9	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_5	145.232518311155	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTCGTCATAACCTTGG	27281857	True	NA	9	True	AATAAA	-15	NA	27294113	27315926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_27294436_27301787_27301957_27303366_27303636_27304779_27304912_27306781_27306883_27309099_27309273_27310060_27310175_27311508_27311617_27312209
transcript_8371.known	chr1	+	820	5	FSM	ENSG00000126088.14	ENST00000460906.5	820	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_4	401.718184801236	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGCAAGAGTGTCCTAAA	45005269	True	NA	NA	False	NA	NA	NA	45012267	45014120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45012286_45012906_45013020_45013135_45013216_45013291_45013355_45013574
transcript_83725.known	chr17	+	1611	7	FSM	ENSG00000109046.15	ENST00000348811.6	1611	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	252.174983339391	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTAGCCAGGCGTGGTG	27281874	True	NA	NA	False	AATACA	-10	NA	27294130	27312887	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_27294436_27304779_27304912_27306781_27306883_27309099_27309273_27310060_27310175_27311508_27311617_27312209
transcript_83726.nic	chr17	+	1504	6	ISM	ENSG00000109046.15	ENST00000467843.6	4187	9	-26	5424	-9	0	5prime_fragment	FALSE	canonical	3	319	junction_5	67.9276085255473	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACCAAAAAG	27281810	True	NA	NA	False	NA	NA	NA	27294066	27308207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_27294436_27301787_27301957_27303366_27303636_27304779_27304912_27306781_27306883_27307743
transcript_83727.known	chr17	+	1900	5	FSM	ENSG00000109046.15	ENST00000581185.5	1900	5	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_1	20.5243757517738	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCACACAGGCGCACAATGG	27281857	True	NA	NA	False	NA	NA	NA	27294113	27307789	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_27294436_27301787_27301957_27303366_27303636_27304779_27304912_27306781
transcript_83729.known	chr17	+	544	2	FSM	ENSG00000109046.15	ENST00000584354.1	544	2	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTCAGTGTAGGGTAATAA	27281857	True	NA	NA	False	NA	NA	NA	27294113	27302009	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_27294436_27301787
transcript_8373.known	chr1	+	486	4	FSM	ENSG00000126088.14	ENST00000461035.5	486	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	449.062975044209	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAACTAAGGTTGAAAG	45005213	True	NA	NA	False	NA	NA	NA	45012211	45013460	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45012286_45012856_45013020_45013135_45013216_45013291
transcript_83733.nic	chr17	+	3029	3	ISM	ENSG00000141068.15	ENST00000644974.2	6026	21	-41	46524	-41	33	5prime_fragment	FALSE	canonical	3	40	junction_2	1.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGAAGGATGGTTGTC	27454310	True	NA	NA	False	NA	NA	NA	27456406	27579911	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_27456875_27550567_27550709_27577491
transcript_83734.known	chr17	-	3995	26	FSM	ENSG00000007171.18	ENST00000646938.1	3995	26	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_8	3.32120460074353	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACATGAATTGCATTTTAC	-27793648	True	NA	-29	True	NA	NA	NA	27793780	27756795	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_27757354_27758880_27759076_27760029_27760179_27760622_27760745_27761143_27761232_27762797_27763006_27763980_27764145_27765534_27765717_27766509_27766589_27767704_27767838_27768976_27769152_27769534_27769585_27770912_27771018_27772307_27772453_27773160_27773244_27774256_27774452_27778689_27778792_27778881_27779057_27780766_27780907_27781035_27781178_27782014_27782107_27782943_27783107_27787677_27787827_27788808_27788932_27789603_27789689_27793587
transcript_83737.known	chr17	-	1419	4	FSM	ENSG00000232859.10	ENST00000379102.8	1419	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	10.6144555520604	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGTGTGTCTTCTCAACT	-27893020	True	NA	2	True	AGTAAA	-18	NA	27893365	27878357	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_27879491_27880273_27880367_27882568_27882713_27893316
transcript_83738.known	chr17	-	2196	3	FSM	ENSG00000232859.10	ENST00000460380.6	2196	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	11	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGTGTGTCTTCTCAACT	-27893014	True	NA	2	True	AGTAAA	-18	NA	27893359	27878357	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_27880367_27882568_27882713_27893316
transcript_83745.known	chr17	+	3526	11	FSM	ENSG00000087095.13	ENST00000407008.8	3526	11	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_5	20.6690590013189	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTCATCTGTTTTATT	28042645	False	NA	22	True	ATTAAA	-17	NA	28042676	28196381	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_28043332_28122602_28122733_28132619_28132676_28161159_28161267_28163542_28163629_28168447_28168658_28172516_28172619_28185178_28185266_28191020_28191220_28192119_28192214_28194581
transcript_83753.known	chr17	+	1503	2	FSM	ENSG00000087095.13	ENST00000582037.2	1503	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGCGTCTCTTTGGGTTT	28042827	False	NA	18	True	AATAAA	-29	NA	28042838	28048926	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_28043332_28047916
transcript_83756.known	chr17	-	974	6	FSM	ENSG00000109083.14	ENST00000357896.7	974	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	73.1491626746335	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGATGTACCTTTTTTCC	-28333160	True	NA	-4	True	AATAAA	-17	NA	28335469	28328326	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28328734_28329172_28329277_28330110_28330229_28330442_28330529_28331858_28331988_28335339
transcript_83757.known	chr17	-	852	6	FSM	ENSG00000109083.14	ENST00000585313.5	852	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	67.2577133123035	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCAAATGGCTTGATGTA	-28333130	True	NA	-14	True	AATAAA	-7	NA	28335439	28328336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28328734_28329172_28329277_28330442_28330529_28331858_28331988_28332145_28332182_28335339
transcript_83758.known	chr17	-	1071	6	FSM	ENSG00000109083.14	ENST00000585089.5	1071	6	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_5	46.2990280675523	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGATGTACCTTTTTT	-28333140	True	NA	-6	True	AATAAA	-15	NA	28335449	28328328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28328734_28329172_28329277_28330442_28330529_28331858_28331988_28332145_28332383_28335339
transcript_83760.known	chr17	-	860	5	FSM	ENSG00000109083.14	ENST00000395418.8	860	5	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_4	31.6889176211495	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATGTACCTTTTTTCCT	-28333163	True	NA	-3	True	AATAAA	-18	NA	28335472	28328325	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28328734_28329172_28329277_28330442_28330529_28331858_28331988_28335339
transcript_83761.known	chr17	-	831	5	FSM	ENSG00000109083.14	ENST00000578985.5	831	5	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_4	45.8441653866662	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAAACTTGTTAATATCA	-28333131	True	NA	NA	False	AATAAA	-23	NA	28335440	28328998	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28329277_28330442_28330529_28331858_28331988_28332145_28332383_28335339
transcript_83765.known	chr17	-	820	4	FSM	ENSG00000109083.14	ENST00000322326.12	820	4	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_3	35.6121078036982	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCGGCTCACTGCAAGC	-28333146	True	NA	NA	False	NA	NA	NA	28335455	28330190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28330529_28331858_28331988_28332145_28332383_28335339
transcript_83767.known	chr17	+	2463	3	FSM	ENSG00000109084.14	ENST00000226230.8	2463	3	0	0	0	0	multi-exon	TRUE	canonical	3	855	junction_2	5.5	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTCTGCTTCTACTTT	28303163	True	NA	20	True	AATAAA	-17	NA	28319199	28328685	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_28319366_28325502_28325648_28326533
transcript_83769.known	chr17	-	1104	3	FSM	ENSG00000109083.14	ENST00000582797.5	1104	3	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	26	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTGCTGGGATTGCAGG	-28333161	True	NA	NA	False	NA	NA	NA	28335470	28329684	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28330529_28331858_28331988_28335339
transcript_83770.known	chr17	+	1075	2	FSM	ENSG00000109084.14	ENST00000582384.1	1075	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGAGTGTATCACCTGT	28303232	False	NA	NA	False	ACTAAA	-17	NA	28319268	28327511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_28319366_28326533
transcript_83773.known	chr17	-	752	2	FSM	ENSG00000109083.14	ENST00000580357.1	752	2	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCCAAGCAAGCCCAATGC	-28333180	True	NA	NA	False	NA	NA	NA	28335489	28331385	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28331988_28335339
transcript_83779.known	chr17	-	2670	11	FSM	ENSG00000004142.12	ENST00000540200.6	2670	11	0	0	0	0	multi-exon	FALSE	canonical	3	837	junction_2	44.9706570999357	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAGTGAGTTCAATGTTA	-28340604	True	NA	-8	True	ATTAAA	-14	NA	28357527	28346632	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28348232_28349082_28349163_28350437_28350564_28350765_28350793_28351663_28351801_28352911_28353020_28353240_28353317_28353694_28353792_28354487_28354586_28355794_28355877_28357287
transcript_8378.known	chr1	+	968	3	FSM	ENSG00000126088.14	ENST00000463092.5	968	3	0	0	0	0	multi-exon	FALSE	canonical	3	825	junction_1	108	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTATCCTTCTCTAGT	45005186	True	NA	NA	False	NA	NA	NA	45012184	45013889	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45012286_45012906_45013020_45013135
transcript_83786.known	chr17	-	1524	11	FSM	ENSG00000004142.12	ENST00000618887.2	1524	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	277.193452303621	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGAGGCTGGCTGGACA	-28340540	True	NA	NA	False	NA	NA	NA	28357463	28347660	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28348232_28349082_28349163_28350437_28350564_28350765_28350793_28351663_28351801_28352911_28353020_28353240_28353317_28353694_28353792_28354487_28354532_28355794_28355877_28357287
transcript_8379.known	chr1	-	5868	14	FSM	ENSG00000162415.7	ENST00000359600.6	5868	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	3.77001561687472	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATTGTGTTCTCTCACTA	-45206397	True	NA	-1	True	AATAAA	-37	NA	45206605	45016398	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45019317_45020065_45020148_45020624_45020789_45034311_45034470_45035687_45035824_45036038_45036300_45038935_45039074_45040391_45040539_45043218_45043396_45051073_45051254_45058608_45058760_45060098_45060248_45087880_45088238_45205755
transcript_8380.known	chr1	+	1816	1	FSM	ENSG00000186603.7	ENST00000334815.6	1816	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAATCTTCTCCTGTGCTTC	45325967	True	NA	31	True	AATAAA	-36	NA	45326894	45328710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45326900_45328700
transcript_83800.known	chr17	+	3570	7	FSM	ENSG00000109079.10	ENST00000226225.7	3570	7	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_5	9.46337971105226	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTACAGAGCCATGTTTAC	28334560	True	NA	6	True	AATAAA	-17	NA	28335760	28347009	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_28335857_28339407_28339727_28340308_28340479_28341236_28341327_28341403_28341457_28342246_28342443_28344363
transcript_83807.known	chr17	+	1656	6	FSM	ENSG00000109079.10	ENST00000544907.6	1656	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	47.6042014952462	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGCAGAATCAATCTGAG	28335583	False	NA	NA	False	NA	NA	NA	28335601	28345255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_28335857_28340308_28340479_28341236_28341327_28341403_28341457_28342246_28342443_28344363
transcript_83811.known	chr17	+	10277	9	FSM	ENSG00000004139.14	ENST00000585482.6	10277	9	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	3.70809924354783	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTCATTTACTGGCCTG	28371490	True	NA	NA	False	AATAAA	-17	NA	28371693	28404049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_28372503_28381202_28381822_28384356_28384570_28384838_28384931_28385039_28385276_28388173_28388277_28388349_28388540_28395904_28396027_28396156
transcript_83812.known	chr17	-	1626	8	FSM	ENSG00000109072.14	ENST00000226218.9	1626	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.728431359084683	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAAAATTATTGTTCTGA	NA	False	NA	NA	False	AATAAA	-17	NA	28370307	28367283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28367482_28367714_28368060_28368520_28368674_28368871_28369029_28369288_28369429_28369506_28369852_28369926_28370047_28370139
transcript_83817.known	chr17	+	3082	6	FSM	ENSG00000244045.13	ENST00000292114.8	3082	6	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_1	9.54148835350125	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCTATCTTTGCTTCAT	28354786	True	NA	19	True	ATTAAA	-16	NA	28357646	28363683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_28357882_28358915_28358990_28359314_28359405_28360528_28360572_28360734_28360848_28361156
transcript_83830.known	chr17	-	6492	5	FSM	ENSG00000076351.13	ENST00000612814.5	6492	5	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_2	5.76085931090146	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCTGAGTTCTGTGAGT	-28405778	True	NA	NA	False	AATAAA	-22	NA	28406212	28394641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28399714_28400609_28400767_28402237_28402322_28404615_28405469_28405886
transcript_83833.known	chr17	-	5363	4	FSM	ENSG00000076351.13	ENST00000618626.1	5363	4	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_2	6.59966329107444	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGATGAGTGTCTTTGTAT	-28405767	True	NA	0	True	NA	NA	NA	28406201	28395675	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28399714_28400609_28400767_28404615_28405469_28405886
transcript_83835.known	chr17	+	585	1	FSM	ENSG00000263266.2	ENST00000571702.1	585	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAAATGACTAAATAAAA	28466471	False	NA	NA	False	NA	NA	NA	28467821	28468406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_28467800_28468400
transcript_83837.known	chr17	-	1379	5	FSM	ENSG00000109103.12	ENST00000335765.9	1379	5	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_1	38.8546972707291	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTGTGGCCAGCCTCT	-28548011	True	NA	-6	True	AATAAA	-18	NA	28552624	28546707	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28547410_28547676_28547850_28547998_28548102_28548591_28548706_28552337
transcript_83838.known	chr17	-	676	5	FSM	ENSG00000109103.12	ENST00000444148.1	676	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	218.555484946043	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCGTCTAGAGACTGAGC	-28547996	True	NA	NA	False	NA	NA	NA	28552609	28547641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28547850_28547998_28548102_28548591_28548657_28552064_28552093_28552337
transcript_83840.known	chr17	-	1653	4	FSM	ENSG00000109103.12	ENST00000301032.8	1653	4	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_1	19.3045763140937	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTGTGGCCAGCCTCT	-28548018	True	NA	-6	True	AATAAA	-18	NA	28552631	28546707	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28547850_28547998_28548102_28548591_28548706_28552337
transcript_83841.known	chr17	-	538	2	FSM	ENSG00000109103.12	ENST00000581945.1	538	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGGGATATTTCAGGCT	-28547936	True	NA	NA	False	GGGGCT	-44	NA	28552549	28547523	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28547850_28552337
transcript_83843.known	chr17	-	2529	12	FSM	ENSG00000087111.21	ENST00000308360.8	2529	12	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_11	30.4335069800941	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTCTGAGCTCTACTCT	-28571513	False	3282	-5	True	AATAAA	-29	NA	28571524	28553386	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28554496_28554850_28555062_28556165_28556267_28556826_28556973_28558475_28558591_28560048_28560192_28561421_28561630_28563430_28563523_28563817_28563908_28570851_28570964_28571048_28571189_28571462
transcript_83849.known	chr17	-	2815	11	FSM	ENSG00000087111.21	ENST00000395346.6	2815	11	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_2	23.7573146630675	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTCTGAGCTCTACTCT	-28571525	False	3282	-5	True	AATAAA	-29	NA	28571536	28553386	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28554496_28554850_28555062_28556165_28556267_28556826_28556973_28558475_28558591_28560048_28560192_28561421_28561630_28563430_28563523_28563817_28563908_28570851_28570964_28571048
transcript_83850.known	chr17	-	2397	11	FSM	ENSG00000087111.21	ENST00000268758.13	2397	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_10	103.707714274301	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGAGCTCTACTCTTTCT	-28571517	False	3282	-1	True	AATAAA	-33	NA	28571528	28553382	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28554496_28554850_28555062_28556165_28556267_28556826_28556973_28558475_28558591_28560048_28560192_28561421_28561630_28563430_28563523_28563817_28563908_28570851_28570964_28571462
transcript_83865.known	chr17	-	1722	10	FSM	ENSG00000109107.14	ENST00000395321.6	1722	10	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_9	106.522819673116	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCTGTCTGTTTTACA	-28576937	False	NA	-24	True	AATAAA	-19	NA	28576948	28573114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28573622_28573734_28573935_28574066_28574242_28574493_28574578_28574695_28574857_28574951_28575007_28575122_28575335_28575420_28575545_28575964_28576021_28576800
transcript_83866.known	chr17	-	1608	9	FSM	ENSG00000109107.14	ENST00000226253.9	1608	9	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_8	41.3430768085782	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTACTTTGCCTGTCTGTT	-28573613	True	NA	-29	True	AATAAA	-14	NA	28576895	28573119	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28573622_28573734_28573935_28574066_28574242_28574493_28574578_28574695_28574857_28574951_28575007_28575122_28575335_28575420_28575545_28576800
transcript_8388.known	chr1	-	3071	11	FSM	ENSG00000070759.17	ENST00000372086.4	3071	11	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_2	7.78716893357271	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCAGCCTTCTTACTTG	-45490351	True	NA	-1	True	AATAAA	-17	NA	45491163	45343882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45345559_45345876_45345995_45346692_45346780_45346978_45347063_45347608_45347694_45347917_45348001_45355302_45355450_45385911_45385961_45421724_45421847_45457563_45457872_45490851
transcript_83887.nic	chr17	-	3243	24	NIC	ENSG00000076382.17	novel	3786	24	NA	NA	-49	0	combination_of_known_junctions	TRUE	canonical	3	32	junction_22	154.812149110744	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTCCAAGCTTACGGAAT	-28591001	True	NA	-13	True	AATAAA	-15	NA	28599074	28577573	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_28577771_28578009_28578091_28578217_28578293_28578372_28578529_28578671_28578753_28579140_28579253_28579364_28579486_28579750_28579838_28580008_28580121_28583510_28583650_28583852_28583987_28584149_28584253_28584332_28584481_28584651_28584746_28585101_28585216_28585318_28585412_28585533_28585654_28585863_28585999_28586089_28586183_28586424_28586500_28591697_28591873_28591981_28592475_28598509_28598636_28598895
transcript_83888.nic	chr17	-	3211	24	NIC	ENSG00000076382.17	novel	3786	24	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_22	157.356505881674	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTCCAAGCTTACGGAAT	-28590966	True	NA	-13	True	AATAAA	-15	NA	28599039	28577573	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_28577771_28578009_28578091_28578217_28578293_28578372_28578529_28578671_28578753_28579140_28579253_28579364_28579486_28579750_28579838_28580008_28580121_28583510_28583650_28583852_28583987_28584149_28584253_28584332_28584481_28584651_28584746_28585101_28585216_28585318_28585412_28585533_28585654_28585863_28585999_28586089_28586183_28586424_28586500_28591697_28591873_28591981_28592478_28598509_28598636_28598895
transcript_83893.known	chr17	-	3786	24	FSM	ENSG00000076382.17	ENST00000321765.10	3786	24	0	0	0	0	multi-exon	FALSE	canonical	3	543	junction_17	72.075417338362	1094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTCCAAGCTTACGGAAT	-28590952	True	NA	-13	True	AATAAA	-15	NA	28599025	28577573	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28577771_28578009_28578091_28578217_28578293_28578372_28578529_28578671_28578753_28579140_28579253_28579364_28579486_28579750_28579838_28580008_28580121_28583510_28583650_28583852_28583987_28584149_28584253_28584332_28584481_28584651_28584746_28585101_28585216_28585318_28585412_28585533_28585654_28585863_28585999_28586089_28586183_28586424_28586500_28591697_28591873_28591981_28593067_28598509_28598636_28598895
transcript_8394.known	chr1	-	3019	10	FSM	ENSG00000070759.17	ENST00000486676.5	3019	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	14.4461537450178	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTCAGCCTTCTTACTT	-45490349	True	NA	-2	True	AATAAA	-16	NA	45491161	45343883	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45345559_45345876_45345995_45346692_45346780_45346978_45347063_45347608_45347694_45347917_45348001_45355302_45355450_45421724_45421847_45457563_45457872_45490851
transcript_8395.nnic	chr1	-	2960	10	NIC	ENSG00000070759.17	novel	3071	11	NA	NA	-37	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	13.8813312771035	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTCAGCCTTCTTACTT	-45490388	True	NA	-2	True	AATAAA	-16	NA	45491200	45343883	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_45345559_45345876_45345995_45346692_45346780_45346978_45347063_45347608_45347694_45347917_45348001_45385911_45385961_45421724_45421847_45457563_45457872_45490851
transcript_83984.known	chr17	-	1582	11	FSM	ENSG00000007202.15	ENST00000580882.5	1582	11	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_3	18.7192414376224	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAAATGATAAGGAATGTC	-28638857	True	NA	NA	False	AATAAA	-17	NA	28645155	28639060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28639461_28639574_28639643_28639900_28640026_28640559_28640684_28641888_28642079_28642274_28642336_28642868_28642988_28643163_28643312_28643609_28643660_28644057_28644188_28644988
transcript_83995.known	chr17	-	735	4	FSM	ENSG00000132581.10	ENST00000591903.1	735	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	154.882751352972	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATCCCTGCCACAAGTTC	-28661096	False	NA	NA	False	NA	NA	NA	28661819	28648924	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28649277_28651485_28651578_28655286_28655484_28661725
transcript_83996.known	chr17	-	583	4	FSM	ENSG00000132581.10	ENST00000587338.1	583	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	9.17726659862414	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCGACCTATCAGTGGGCA	-28661466	True	NA	NA	False	NA	NA	NA	28662189	28649126	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28649277_28651485_28651578_28655286_28655484_28662045
transcript_83997.known	chr17	-	1309	3	FSM	ENSG00000132581.10	ENST00000247020.9	1309	3	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_1	2	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGTATCTGTTACTGC	-28657259	True	NA	NA	False	AATAAA	-17	NA	28661906	28648345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28649277_28655286_28655484_28661725
transcript_83998.known	chr17	-	1025	3	FSM	ENSG00000132581.10	ENST00000592250.5	1025	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	153	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTGTGTTGTTATTTAT	-28661462	True	NA	-3	True	GATAAA	-20	NA	28662185	28648588	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28649277_28655286_28655484_28662045
transcript_84.known	SIRV12003	+	12000	1	FSM	SIRV12003A	SIRV12003	12000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	12000	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV12003_+_0_12000
transcript_84000.known	chr17	-	823	2	FSM	ENSG00000132581.10	ENST00000585749.5	823	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTGTGTTGTTATTTAT	-28661457	True	NA	-3	True	GATAAA	-20	NA	28662180	28648588	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28649277_28662045
transcript_84001.known	chr17	+	5569	38	FSM	ENSG00000109111.15	ENST00000347486.8	5569	38	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_2	81.2671918093192	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTCTCTTTGGTGGTCAAC	28654474	True	NA	17	True	CATAAA	-17	NA	28662197	28701735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_28662343_28672756_28672859_28673370_28673511_28674282_28674442_28674536_28674614_28674969_28675163_28675400_28675486_28676156_28676431_28677714_28677817_28678075_28678193_28678544_28678635_28678820_28678964_28681255_28681405_28681881_28681981_28682726_28682857_28682941_28683093_28683267_28683423_28683620_28683817_28684585_28684726_28684843_28684962_28686338_28686416_28686653_28686790_28687087_28687226_28687303_28687472_28688090_28688219_28689353_28689562_28690081_28690230_28690920_28691064_28693695_28693837_28695351_28695548_28696843_28697083_28697619_28697734_28697905_28698031_28699780_28699894_28700172_28700251_28700345_28700513_28700940_28701129_28701438
transcript_84002.known	chr17	+	6404	37	FSM	ENSG00000109111.15	ENST00000314616.11	6404	37	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_1	46.5747772570434	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGCCTCTGCCGTTCAT	28654481	True	NA	21	True	AGTAAA	-15	NA	28662204	28702679	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_28662343_28673370_28673511_28674282_28674442_28674536_28674614_28674969_28675163_28675400_28675486_28676156_28676431_28677714_28677817_28678075_28678193_28678544_28678635_28678820_28678964_28681255_28681405_28681881_28681981_28682726_28682857_28682941_28683093_28683267_28683423_28683620_28683817_28684585_28684726_28684843_28684962_28686338_28686416_28686653_28686790_28687087_28687226_28687303_28687472_28688090_28688219_28689353_28689562_28690081_28690230_28690920_28691064_28693695_28693837_28695351_28695548_28696843_28697083_28697619_28697734_28697905_28698031_28699780_28699894_28700172_28700251_28700345_28700513_28700940_28701129_28701438
transcript_84009.nic	chr17	+	549	5	ISM	ENSG00000109111.15	ENST00000314616.11	6404	37	-5	27680	2	0	5prime_fragment	FALSE	canonical	3	221	junction_1	14.0890028036054	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGACGAGGACGATGACGA	28654476	True	NA	-29	True	NA	NA	NA	28662199	28674999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_28662343_28673370_28673511_28674282_28674442_28674536_28674614_28674969
transcript_84020.known	chr17	-	1657	5	FSM	ENSG00000167525.15	ENST00000674362.1	1657	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	24.9937492185546	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACTGGTCTGTGTGAAAT	-28710088	False	NA	-87	True	NA	NA	NA	28710104	28703280	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28704213_28704306_28704617_28704707_28704844_28707837_28707884_28709871
transcript_84028.known	chr17	-	1566	4	FSM	ENSG00000167525.15	ENST00000301039.6	1566	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	20.0055547841649	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGCCACTGTGCCTGG	-28711838	False	NA	-3	True	AATAAA	-18	NA	28711854	28703196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28704213_28704306_28704436_28704707_28704844_28711569
transcript_84033.known	chr17	-	863	11	FSM	ENSG00000109113.20	ENST00000436730.7	863	11	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_10	337.681210611429	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGACTGCCCAGCCCTAGG	-28717922	False	NA	NA	False	NA	NA	NA	28718161	28714624	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715194_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28716902_28716995_28717212_28717292_28718121
transcript_84034.known	chr17	-	1592	11	FSM	ENSG00000109113.20	ENST00000301043.10	1592	11	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_10	334.06168592043	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGGCTGGAGTTCTTT	-28718176	False	3832	-2	True	ATTAAA	-19	NA	28718415	28714283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715194_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28716902_28716995_28717212_28717426_28718121
transcript_84036.known	chr17	-	1184	11	FSM	ENSG00000109113.20	ENST00000450529.5	1184	11	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_10	416.329965291954	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGGGCTGGAGTTCTT	-28717927	False	3832	-3	True	ATTAAA	-18	NA	28718166	28714284	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715218_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28716902_28716995_28717212_28717292_28718121
transcript_84040.known	chr17	-	1741	10	FSM	ENSG00000109113.20	ENST00000395245.9	1741	10	0	0	0	0	multi-exon	FALSE	canonical	3	881	junction_8	131.832478809798	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGGCTGGAGTTCTTT	-28717857	False	NA	-2	True	ATTAAA	-19	NA	28717868	28714283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715194_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28716902_28716995_28717212
transcript_84046.known	chr17	-	1597	10	FSM	ENSG00000109113.20	ENST00000395243.7	1597	10	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_3	324.262734503449	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGGCTGGAGTTCTTT	-28717737	False	3031	-2	True	ATTAAA	-19	NA	28717748	28714283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715218_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28716902_28716995_28717212
transcript_84050.nic	chr17	-	2192	9	NIC	ENSG00000109113.20	novel	1741	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	115	junction_8	368.595115777461	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTTGGGGCTGGAGTTC	-28718175	False	3832	-5	True	ATTAAA	-16	NA	28718414	28714286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_28714711_28714792_28714901_28715031_28715123_28715194_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28717212
transcript_84053.nic	chr17	-	1990	9	ISM	ENSG00000109113.20	ENST00000415040.6	1293	10	-3	2	-3	0	intron_retention	FALSE	canonical	3	92	junction_7	375.047247023625	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTTGGGGCTGGAGTTC	-28717947	False	3832	-5	True	ATTAAA	-16	NA	28718186	28714286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715194_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28716902_28716995_28717212
transcript_841.nic	chr1	-	2246	12	NIC	ENSG00000221978.13	novel	1598	12	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	118	junction_6	315.469085334289	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTTAAAGCTATGTATGAA	-1399336	False	14990	-27	True	AATAAA	-15	NA	1399346	1386712	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_1387583_1387776_1387870_1387953_1388066_1390229_1390372_1390458_1390564_1390765_1390866_1392678_1392804_1393395_1393461_1395393_1395515_1398232_1398343_1398596_1398672_1399018
transcript_84121.known	chr17	+	3573	15	FSM	ENSG00000160602.14	ENST00000268766.11	3573	15	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	17.855428489135	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGAGTGTGGTGTCTT	28728584	True	NA	12	True	AATAAA	-14	NA	28728787	28743455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_28728861_28733982_28734189_28734771_28735005_28735239_28735372_28737305_28737515_28737674_28737737_28737818_28738001_28738094_28738246_28738670_28738748_28739083_28739202_28740462_28740614_28740821_28740986_28741077_28741237_28741412_28741572_28741958
transcript_84183.known	chr17	+	580	6	FSM	ENSG00000198242.14	ENST00000394935.7	580	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7464.73355452155	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATACATGCCTGTCTGTCA	28720237	False	NA	33	True	AATATA	-23	NA	28720263	28723933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_28720329_28720413_28720431_28720706_28720891_28722722_28722900_28723570_28723641_28723866
transcript_84184.known	chr17	+	636	5	FSM	ENSG00000198242.14	ENST00000496182.5	636	5	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_1	6575.6783442851	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGCCTGTCTGTCAATT	28720048	False	NA	36	True	AATATA	-26	NA	28720078	28723936	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_28720214_28720706_28720891_28722722_28722900_28723570_28723641_28723866
transcript_84186.known	chr17	+	688	5	FSM	ENSG00000198242.14	ENST00000394938.8	688	5	0	0	0	0	multi-exon	FALSE	canonical	3	442	junction_1	6563.85756910523	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGCCTGTCTGTCAATT	28720217	False	NA	36	True	AATATA	-26	NA	28720243	28723936	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_28720431_28720706_28720891_28722722_28722900_28723570_28723641_28723866
transcript_84190.known	chr17	-	1042	4	FSM	ENSG00000160606.11	ENST00000292090.8	1042	4	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_2	17.2497987105808	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTGTCCTTTATTGGGC	-28722401	True	NA	-1	True	AATGAA	-15	NA	28726233	28724347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28724894_28725303_28725387_28725480_28725564_28725903
transcript_84191.known	chr17	-	784	4	FSM	ENSG00000160606.11	ENST00000394933.7	784	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	133.369994959719	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGGGACTTAGCCCCAAG	-28726917	False	239	-106	True	NA	NA	NA	28726932	28724452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28724894_28725303_28725387_28725480_28725564_28726755
transcript_84192.known	chr17	-	578	4	FSM	ENSG00000160606.11	ENST00000580518.1	578	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	135.711294870971	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTACTTTTCCCGCCTC	-28727696	True	NA	NA	False	NA	NA	NA	28727935	28724598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28724894_28725303_28725387_28725480_28725564_28727818
transcript_84196.known	chr17	+	970	5	FSM	ENSG00000198242.14	ENST00000422514.7	970	5	0	0	0	0	multi-exon	FALSE	canonical	3	12081	junction_1	1995.56464440519	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCATTAGTGTTTTCAAT	28532132	True	NA	29	True	AATAAA	-23	NA	28719984	28724359	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_28720031_28720706_28720891_28722722_28722900_28723570_28723641_28723866
transcript_84197.known	chr17	+	639	4	FSM	ENSG00000198242.14	ENST00000472628.1	639	4	0	0	0	0	multi-exon	FALSE	canonical	3	12918	junction_3	1686.96499337979	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGCCTGTCTGTCAATT	28720102	False	NA	36	True	AATATA	-26	NA	28720568	28723936	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_28720891_28722722_28722900_28723570_28723641_28723866
transcript_84216.known	chr17	+	2894	7	FSM	ENSG00000076604.16	ENST00000262395.10	2894	7	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_4	19.5994614438481	1232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTGCCTTACTGTCTTG	28737480	True	NA	15	True	ATTAAA	-15	NA	28744010	28750956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_28744256_28747212_28747265_28747842_28747948_28748016_28748179_28748261_28748424_28748510_28748667_28748944
transcript_8422.known	chr1	-	1677	16	FSM	ENSG00000132781.20	ENST00000475516.5	1677	16	0	0	0	0	multi-exon	FALSE	canonical	1	37	junction_14	72.9354661479737	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	-45340035	False	NA	-2	True	AGTAAA	-20	NA	45340080	45329241	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333498_45334390_45334512_45339975
transcript_84229.known	chr17	+	789	6	FSM	ENSG00000076604.16	ENST00000586813.5	789	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	130.164511292441	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGACAGCTGTAACACCGC	28737505	True	NA	NA	False	NA	NA	NA	28744035	28748603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_28744256_28747217_28747265_28747842_28747948_28748016_28748179_28748261_28748424_28748510
transcript_8423.known	chr1	-	1742	16	FSM	ENSG00000132781.20	ENST00000481571.5	1742	16	0	0	0	0	multi-exon	FALSE	canonical	1	37	junction_14	73.0286397396407	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	-45339294	True	NA	-2	True	AGTAAA	-20	NA	45340388	45329241	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333498_45334390_45334512_45340218
transcript_84246.known	chr17	+	787	4	FSM	ENSG00000076604.16	ENST00000461195.5	787	4	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_3	17.0489491367259	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGCCTTCCCTGAACTG	28737488	True	NA	NA	False	NA	NA	NA	28744018	28748423	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_28744256_28747212_28747265_28747842_28748179_28748261
transcript_84249.known	chr17	+	702	2	FSM	ENSG00000076604.16	ENST00000394925.5	702	2	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGGGCAAAGAGCCCAAGA	28737524	True	NA	NA	False	NA	NA	NA	28744054	28747713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_28744256_28747212
transcript_8425.known	chr1	-	1708	16	FSM	ENSG00000132781.20	ENST00000456914.7	1708	16	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_15	72.7554808931946	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	-45337812	True	NA	-2	True	AGTAAA	-20	NA	45339970	45329241	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333562_45334390_45334512_45339898
transcript_84251.known	chr17	+	1841	10	FSM	ENSG00000132591.12	ENST00000254928.10	1841	10	0	0	0	0	multi-exon	FALSE	canonical	3	576	junction_9	44.8151209049847	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTATTCCTTTTATTTAT	28843644	True	NA	21	True	AATAAA	-22	NA	28855015	28861061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_28855318_28856263_28856392_28856504_28856583_28857938_28857986_28858145_28858208_28858373_28858487_28858575_28858825_28858963_28859114_28859202_28859284_28860430
transcript_84255.nic	chr17	+	2995	9	ISM	ENSG00000132591.12	ENST00000254928.10	1841	10	-7	0	-1	0	intron_retention	TRUE	canonical	3	610	junction_4	38.6522961801754	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTATTCCTTTTATTTAT	28843637	True	NA	21	True	AATAAA	-22	NA	28855008	28861061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_28855318_28856263_28856392_28856504_28856583_28857938_28857986_28858145_28858208_28858373_28858487_28858575_28858825_28858963_28859114_28859202
transcript_8426.known	chr1	-	1776	16	FSM	ENSG00000132781.20	ENST00000355498.6	1776	16	0	0	0	0	multi-exon	FALSE	canonical	1	75	junction_2	59.454184041159	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	-45340070	False	NA	-2	True	AGTAAA	-20	NA	45340115	45329241	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333562_45334390_45334512_45339975
transcript_84267.known	chr17	-	4147	5	FSM	ENSG00000173065.14	ENST00000583522.6	4147	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	47.4888144724629	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	-28838745	True	NA	-17	True	AGTAAA	-15	NA	28842839	28755979	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28759765_28766585_28766708_28790377_28790426_28834292_28834327_28842681
transcript_84268.known	chr17	-	4147	5	FSM	ENSG00000173065.14	ENST00000583307.6	4147	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	146.348898185125	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	-28838633	True	NA	-17	True	AGTAAA	-15	NA	28842727	28755979	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28759877_28766585_28766708_28790377_28790426_28834292_28834327_28842681
transcript_8427.known	chr1	-	1888	16	FSM	ENSG00000132781.20	ENST00000372115.7	1888	16	0	0	0	0	multi-exon	FALSE	canonical	1	75	junction_2	59.5790418034918	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	NA	False	NA	-2	True	AGTAAA	-20	NA	45340470	45329241	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333562_45334390_45334512_45340218
transcript_84273.known	chr17	-	4050	4	FSM	ENSG00000173065.14	ENST00000577682.6	4050	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	30.2103734943259	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	-28838696	True	NA	-17	True	AGTAAA	-15	NA	28842790	28755979	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28759765_28766585_28766708_28834292_28834327_28842681
transcript_84276.known	chr17	-	4169	4	FSM	ENSG00000173065.14	ENST00000581229.6	4169	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	159.354949719173	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	-28838689	True	NA	-17	True	AGTAAA	-15	NA	28842783	28755979	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28759877_28766585_28766708_28790377_28790426_28842681
transcript_84278.known	chr17	-	4162	4	FSM	ENSG00000173065.14	ENST00000577376.6	4162	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	153.573724604468	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	-28838696	True	NA	-17	True	AGTAAA	-15	NA	28842790	28755979	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28759877_28766585_28766708_28834292_28834327_28842681
transcript_8428.known	chr1	-	1662	16	FSM	ENSG00000132781.20	ENST00000528013.6	1662	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_14	88.270543721498	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTCTGAAAGCCCCCATT	-45339901	False	NA	-66	True	NA	NA	NA	45339946	45329305	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333604_45334390_45334512_45339898
transcript_84282.nnic	chr17	-	2950	4	NIC	ENSG00000173065.14	novel	4169	4	NA	NA	-53	-1397	combination_of_known_splicesites	FALSE	canonical	3	55	junction_3	141.349055729267	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTGGTTCTCTCTACA	NA	False	NA	NA	False	ATTAAA	-20	NA	28812488	28757376	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_28759877_28766585_28766708_28790377_28790426_28812208
transcript_84286.known	chr17	-	3974	3	FSM	ENSG00000173065.14	ENST00000582059.6	3974	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	53	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	-28807140	False	NA	-17	True	AGTAAA	-15	NA	28812224	28755979	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28759765_28766585_28766708_28812157
transcript_84288.known	chr17	-	4010	3	FSM	ENSG00000173065.14	ENST00000582266.6	4010	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	32	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	-28838690	True	NA	-17	True	AGTAAA	-15	NA	28842784	28755979	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28759765_28766585_28766708_28842681
transcript_84289.known	chr17	-	4246	3	FSM	ENSG00000173065.14	ENST00000452648.8	4246	3	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_2	10.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	-28807351	True	NA	-17	True	AGTAAA	-15	NA	28812435	28755979	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28759877_28766585_28766708_28812208
transcript_84290.known	chr17	-	4128	3	FSM	ENSG00000173065.14	ENST00000581407.6	4128	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	164.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	-28838696	True	NA	-17	True	AGTAAA	-15	NA	28842790	28755979	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28759877_28766585_28766708_28842681
transcript_84292.nic	chr17	-	2773	3	NIC	ENSG00000173065.14	novel	4246	3	NA	NA	-36	-1397	combination_of_known_junctions	FALSE	canonical	3	116	junction_1	122	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTGGTTCTCTCTACA	-28807387	True	NA	NA	False	ATTAAA	-20	NA	28812471	28757376	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_28759765_28766585_28766708_28812208
transcript_84298.known	chr17	-	2679	12	FSM	ENSG00000132589.16	ENST00000580805.5	2679	12	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_10	401.903158435376	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGCATTGTGTCTTCTG	-28886314	True	NA	-7	True	AATAAA	-17	NA	28897653	28879338	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28880600_28880712_28880863_28881191_28881376_28881813_28882029_28882117_28882238_28882336_28882451_28882572_28882692_28883107_28883232_28884224_28884316_28885856_28885948_28888944_28889027_28897525
transcript_8430.known	chr1	-	1891	16	FSM	ENSG00000132781.20	ENST00000672818.3	1891	16	0	0	0	0	multi-exon	TRUE	canonical	1	15	junction_14	76.3806258157132	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	-45340395	False	NA	-2	True	AGTAAA	-20	NA	45340440	45329241	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333595_45334390_45334512_45340218
transcript_84306.known	chr17	-	2668	11	FSM	ENSG00000132589.16	ENST00000394908.9	2668	11	0	0	0	0	multi-exon	FALSE	canonical	3	996	junction_5	95.063347300629	1121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGCATTGTGTCTTCTG	-28886394	True	NA	-7	True	AATAAA	-17	NA	28897733	28879338	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28880600_28880712_28880863_28881191_28881376_28881813_28882029_28882117_28882238_28882336_28882451_28882572_28882692_28883107_28883232_28884224_28884316_28888944_28889027_28897525
transcript_84308.known	chr17	-	2585	11	FSM	ENSG00000132589.16	ENST00000585169.5	2585	11	0	0	0	0	multi-exon	FALSE	canonical	2	36	junction_9	411.833716443907	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCCTGCATTGTGTCTTC	-28886313	True	NA	-9	True	AATAAA	-15	NA	28897652	28879340	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28880600_28880712_28880863_28881191_28881376_28881813_28882029_28882117_28882238_28882336_28882451_28882572_28882692_28883107_28883232_28885856_28885948_28888944_28889027_28897525
transcript_84310.nic	chr17	-	2713	11	Fusion	ENSG00000167536.14_ENSG00000132589.16	novel	2668	11	NA	NA	-114	0	multi-exon	FALSE	canonical	3	92	junction_7	306.37018458068	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGCATTGTGTCTTCTG	-28895547	False	NA	-7	True	AATAAA	-17	NA	28897847	28879338	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr17_-_28880600_28880712_28880863_28881191_28881376_28881813_28882029_28882117_28882238_28882336_28882451_28882572_28882692_28883176_28883232_28884224_28884316_28888944_28889027_28897525
transcript_84313.nnic	chr17	-	2586	10	NIC	ENSG00000132589.16	novel	2668	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	76	junction_9	326.547635154033	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGCATTGTGTCTTCTG	-28886394	True	NA	-7	True	AATAAA	-17	NA	28897733	28879338	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_28880600_28880712_28880863_28881191_28881376_28881813_28882029_28882117_28882238_28882336_28882451_28882572_28882692_28883107_28883232_28884224_28884316_28897525
transcript_84325.known	chr17	-	1929	5	FSM	ENSG00000167536.14	ENST00000378895.9	1929	5	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_4	21.7313138121007	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGCTCACTCCTGCCTC	-28900779	True	NA	-9	True	AATAAA	-18	NA	28903079	28897780	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28898893_28900989_28901302_28901492_28901617_28902582_28902702_28902817
transcript_84326.nnic	chr17	-	1776	4	NIC	ENSG00000167536.14	novel	1929	5	NA	NA	23	0	intron_retention	FALSE	canonical	3	15	junction_3	103.654340103163	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGCGCTCACTCCTGC	-28900748	True	NA	-12	True	AATAAA	-15	NA	28903048	28897783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_28898893_28900989_28901302_28901492_28901617_28902817
transcript_84330.known	chr17	-	2037	4	FSM	ENSG00000167536.14	ENST00000394901.7	2037	4	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_2	17.8200885394982	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGCTCACTCCTGCCTC	-28900771	True	NA	-9	True	AATAAA	-18	NA	28903071	28897780	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28898893_28900989_28901302_28901492_28901617_28902582
transcript_84333.known	chr17	+	2169	8	FSM	ENSG00000179761.12	ENST00000323372.9	2169	8	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_7	8.97388501402252	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTCTGTAGCGGGCTTT	29043103	True	NA	19	True	AATAAA	-33	NA	29043140	29057216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_29043340_29044858_29045008_29052919_29053134_29053412_29053596_29054544_29054692_29055062_29055222_29055812_29055889_29056174
transcript_84350.known	chr17	-	4506	15	FSM	ENSG00000109118.14	ENST00000332830.9	4506	15	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_14	25.4282704637085	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTCTGACTGTCTGTC	-28950248	True	NA	-4	True	TATAAA	-19	NA	28951518	28905249	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28906518_28906855_28906995_28907589_28907673_28908782_28908882_28910225_28910370_28911111_28911238_28912481_28913278_28913878_28914038_28917284_28917450_28919142_28919276_28921687_28921809_28923908_28924303_28926990_28927064_28950064_28950247_28950894
transcript_84357.known	chr17	-	7679	11	FSM	ENSG00000109118.14	ENST00000577226.5	7679	11	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_10	21.1471038206181	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGTTTTCTGACTGTCT	-28950037	False	NA	-7	True	TATAAA	-16	NA	28951307	28905252	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28910370_28911111_28911238_28912481_28913278_28913878_28914038_28917284_28917450_28919142_28919276_28921687_28921809_28923908_28924303_28926990_28927064_28950064_28950247_28950894
transcript_84363.known	chr17	-	4206	17	FSM	ENSG00000063015.21	ENST00000317338.17	4206	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.00682429475029	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATGGCCAGGTGAATGAT	-29005899	True	NA	NA	False	ATTAAA	-40	NA	29006033	28954904	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_28955995_28956158_28956262_28956349_28956468_28956718_28956758_28957044_28957243_28957347_28957540_28957946_28958142_28959024_28959222_28959333_28959473_28959697_28959893_28960504_28960672_28960804_28960974_28963961_28964148_28969756_28969953_28979679_28979814_28981370_28982040_29005814
transcript_84370.nic	chr17	-	3126	17	ISM	ENSG00000196535.18	ENST00000531253.5	7504	41	-96	37908	-62	359	5prime_fragment	TRUE	canonical	2	21	junction_6	24.006428175595	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTAAGACCACCACTCCC	-29177261	True	NA	NA	False	NA	NA	NA	29180460	29111426	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_29111584_29111721_29111864_29114010_29114098_29114906_29115100_29115350_29115442_29115663_29115841_29116443_29116456_29118044_29118190_29118376_29118441_29119334_29119436_29120615_29120759_29120997_29121212_29121546_29121724_29121850_29121958_29122165_29122254_29165941_29167022_29180312
transcript_84380.nic	chr17	-	642	2	ISM	ENSG00000108256.9	ENST00000225388.9	10877	4	-40	31642	-40	-23082	5prime_fragment	FALSE	canonical	3	130	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGAGAGAATCAGTCTGT	-29294149	True	NA	NA	False	AATAAA	-1	NA	29294188	29287480	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_29287717_29293782
transcript_84381.nic	chr17	-	574	2	ISM	ENSG00000108256.9	ENST00000225388.9	10877	4	-40	31710	-40	-23150	5prime_fragment	FALSE	canonical	3	130	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAACCAAGAATTTCATT	-29294149	True	NA	NA	False	NA	NA	NA	29294188	29287548	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_29287717_29293782
transcript_84382.known	chr17	-	10877	4	FSM	ENSG00000108256.9	ENST00000225388.9	10877	4	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_3	28.003967972811	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTGTTTGTTATCTTTT	-29273061	True	NA	-2	True	AATAAA	-16	NA	29294148	29255838	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_29264592_29267497_29267531_29285991_29287717_29293782
transcript_84383.known	chr17	-	341	1	FSM	ENSG00000239256.1	ENST00000492004.1	341	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTAATGAAAAGTCAATAAA	NA	False	NA	NA	False	NA	NA	NA	29340822	29340481	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_29340500_29340800
transcript_84390.nic	chr17	+	1986	12	ISM	ENSG00000160551.12_ENSG00000284162.1	ENST00000536202.1	4068	18	-595	45819	-27	-16476	5prime_fragment	FALSE	canonical	1	2	junction_6	4.86342395458009	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTATTTGGATTTCAAT	29385522	True	NA	17	True	TTTAAA	-5	NA	29390335	29498521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_29391025_29451454_29451681_29467144_29467217_29475669_29475772_29477660_29477707_29478250_29478348_29480367_29480482_29482196_29482289_29489663_29489758_29491783_29491866_29495559_29495728_29498317
transcript_84404.known	chr17	+	1473	7	FSM	ENSG00000167543.16	ENST00000301057.8	1473	7	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_1	33.4153158496719	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGAGTTGAGCTTGTGC	29566378	True	NA	24	True	ATTAAA	-15	NA	29568700	29573157	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_29568831_29569017_29569087_29569317_29569360_29571590_29571720_29571856_29572058_29572141_29572698_29572811
transcript_84408.nnic	chr17	+	1392	6	NIC	ENSG00000167543.16	novel	1473	7	NA	NA	-48	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_3	149.309611211067	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGAGTTGAGCTTGTGC	29566330	True	NA	24	True	ATTAAA	-15	NA	29568652	29573157	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_29568831_29569017_29569087_29569317_29569360_29571856_29572058_29572141_29572698_29572811
transcript_84414.known	chr17	-	3492	2	FSM	ENSG00000168792.5	ENST00000307201.5	3492	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTCTACTGCCGGTGAA	-29567016	False	NA	-8	True	AATAAA	-17	NA	29567037	29560546	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_29563087_29566085
transcript_84416.nnic	chr17	-	3640	21	NNC	ENSG00000108262.16	novel	3783	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	65.0380465573806	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTTCTGATGCTTAGAG	-29586815	True	NA	-7	True	AATAAA	-14	NA	29589648	29573474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_29574915_29575078_29575143_29575287_29575471_29575629_29575704_29575811_29575899_29576077_29576132_29576219_29576451_29576521_29576675_29576862_29576997_29577135_29577248_29577644_29577743_29578298_29578372_29578730_29578780_29581337_29581381_29581741_29581837_29581926_29582145_29582697_29582804_29582924_29583038_29583482_29583617_29589326_29589433_29589575
transcript_84417.nnic	chr17	-	3676	21	NNC	ENSG00000108262.16	novel	3783	20	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	65.0380465573806	63	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTTCTGATGCTTAGAG	-29586824	True	NA	-7	True	AATAAA	-14	NA	29589657	29573474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_29574915_29575078_29575143_29575287_29575471_29575629_29575704_29575811_29575899_29576077_29576132_29576219_29576451_29576521_29576675_29576862_29576997_29577135_29577248_29577644_29577743_29578298_29578372_29578730_29578780_29581337_29581381_29581741_29581837_29581926_29582145_29582697_29582804_29582924_29583038_29583482_29583617_29589326_29589436_29589551
transcript_84422.known	chr17	+	3550	15	FSM	ENSG00000198720.13	ENST00000394859.8	3550	15	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	11.9328478219936	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTTTGCTACCTAACTTT	29592028	True	NA	10	True	AATAAA	-18	NA	29593131	29614761	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_29593736_29607741_29607878_29607985_29608111_29608194_29608241_29608850_29608995_29609085_29609276_29609354_29609422_29610684_29610767_29611578_29611644_29611875_29612007_29612115_29612274_29612401_29612555_29612651_29612816_29612886_29612964_29613353
transcript_84436.known	chr17	-	2554	10	FSM	ENSG00000167549.19	ENST00000580212.6	2554	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	7.420359047584	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCCGGTATGAAGCCTCT	-29622449	True	NA	-3	True	AGTAAA	-15	NA	29622912	29614764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_29615858_29615944_29616176_29616278_29616337_29616701_29616848_29616937_29617043_29618789_29618972_29619059_29619190_29619650_29619774_29621223_29621485_29622687
transcript_84438.known	chr17	-	4069	10	FSM	ENSG00000167549.19	ENST00000459686.5	4069	10	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_9	6.63511050081494	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCGGTATGAAGCCTCTTT	-29622436	True	NA	-1	True	AGTAAA	-17	NA	29622899	29614762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_29615855_29615944_29616176_29616278_29616337_29616701_29616848_29616937_29618633_29618789_29618972_29619059_29619190_29619650_29619774_29621223_29621424_29622687
transcript_84441.known	chr17	-	560	3	FSM	ENSG00000141298.19	ENST00000582084.1	560	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	15	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAGTTTTCTGTAGTGC	NA	False	NA	-15	True	AATAAA	-23	NA	29930276	29925216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_29925556_29929937_29930041_29930158
transcript_84443.known	chr17	-	570	2	FSM	ENSG00000141298.19	ENST00000590153.1	570	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAATTGATACCTATATT	-29928960	True	NA	-75	True	NA	NA	NA	29930228	29925276	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_29925556_29929937
transcript_84448.known	chr17	+	2506	7	FSM	ENSG00000126653.18	ENST00000247026.10	2506	7	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	83.9809832971462	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATGCATTTATTTTAAAA	30109845	True	NA	15	True	AATAAA	-22	NA	30116815	30186475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_30116864_30118079_30118174_30172541_30172599_30178070_30178200_30179089_30179298_30180907_30181017_30184614
transcript_8445.known	chr1	-	2209	15	FSM	ENSG00000132781.20	ENST00000672011.1	2209	15	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_11	79.3990181402305	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGTAAAGTGCTTATTTT	NA	False	NA	-30	True	NA	NA	NA	45340893	45329269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333284_45333325_45333412_45333562_45334390_45334512_45340218
transcript_84457.known	chr17	+	2420	6	FSM	ENSG00000126653.18	ENST00000612959.4	2420	6	0	0	0	0	multi-exon	FALSE	canonical	2	48	junction_1	153.09813846027	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATGCATTTATTTTAAA	30109836	True	NA	14	True	AATAAA	-21	NA	30116806	30186474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_30116864_30172541_30172599_30178070_30178200_30179089_30179298_30180907_30181017_30184614
transcript_84463.nic	chr17	+	409	5	ISM	ENSG00000126653.18	ENST00000247026.10	2506	7	-26	7331	9	0	5prime_fragment	FALSE	canonical	3	211	junction_1	97.8068888166882	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAATGGAAAAGAAA	30109819	True	NA	NA	False	AAAAAG	-8	NA	30116789	30179144	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_30116864_30118079_30118174_30172541_30172599_30178070_30178200_30179089
transcript_84464.nic	chr17	+	529	5	ISM	ENSG00000126653.18	ENST00000247026.10	2506	7	-26	7211	9	0	5prime_fragment	FALSE	canonical	3	211	junction_1	97.8068888166882	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAGAGAAAAGAGGGCT	30109819	True	NA	NA	False	AAGAAA	-26	NA	30116789	30179264	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_30116864_30118079_30118174_30172541_30172599_30178070_30178200_30179089
transcript_84468.nic	chr17	+	319	4	ISM	ENSG00000126653.18	ENST00000247026.10	2506	7	-26	8311	9	0	5prime_fragment	FALSE	canonical	3	211	junction_1	97.2042523075337	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATCCCAAATTGCTTTTG	30109819	True	NA	28	True	AAAAAG	-8	NA	30116789	30178164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_30116864_30118079_30118174_30172541_30172599_30178070
transcript_84469.known	chr17	+	2057	7	FSM	ENSG00000126653.18	ENST00000540900.7	2057	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	191.782573649317	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGCTGAATTTATATATA	NA	False	NA	-52	True	NA	NA	NA	30115520	30185847	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_30115624_30116645_30116864_30172541_30172599_30178070_30178200_30179089_30179298_30180907_30181017_30184614
transcript_84472.known	chr17	-	2307	12	FSM	ENSG00000108578.15	ENST00000261714.11	2307	12	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_8	37.7008669913681	213	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTGATTTATGTGATCT	-30287299	True	NA	-16	True	AATAAA	-19	NA	30291944	30248202	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_30249169_30266884_30266955_30271270_30271389_30272560_30272629_30272740_30272900_30274041_30274198_30285387_30285481_30286813_30286903_30287805_30287948_30289372_30289483_30291310_30291509_30291806
transcript_84479.known	chr17	+	9372	21	FSM	ENSG00000108582.12	ENST00000225719.9	9372	21	0	0	0	0	multi-exon	TRUE	canonical	3	170	junction_6	29.2651670078952	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTACTCAATTATGAATAA	30374903	True	NA	NA	False	ATTAAA	-19	NA	30378926	30469989	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_30379727_30384988_30385237_30420840_30420984_30421663_30421834_30422673_30423024_30423505_30423698_30427390_30427559_30431771_30431882_30438974_30439078_30442307_30442451_30443801_30443972_30445690_30446021_30449552_30449749_30451710_30451847_30455338_30455471_30456255_30456352_30456461_30456527_30461179_30461312_30461876_30462063_30462369_30462470_30464587
transcript_84485.known	chr17	+	5987	9	FSM	ENSG00000108587.16	ENST00000451249.7	5987	9	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_2	62.1691241694782	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATATCCTTGGGTTTGTC	30468660	True	NA	NA	False	NA	NA	NA	30477407	30527592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_30477465_30481142_30481258_30484213_30484302_30484662_30484771_30490125_30490218_30492678_30492754_30510879_30510910_30519938_30520022_30522253
transcript_84487.known	chr17	+	6039	9	FSM	ENSG00000108587.16	ENST00000225724.9	6039	9	0	0	0	0	multi-exon	TRUE	canonical	3	243	junction_2	84.6329390662997	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATATCCTTGGGTTTGTC	30468614	True	NA	NA	False	NA	NA	NA	30477361	30527592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_30477465_30481142_30481264_30484213_30484302_30484662_30484771_30490125_30490218_30492678_30492754_30510879_30510910_30519938_30520022_30522253
transcript_84489.known	chr17	+	1011	9	FSM	ENSG00000108587.16	ENST00000467337.6	1011	9	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	144.100659262892	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTCAGTTGCTTTTGTC	30468675	True	NA	NA	False	ATTAAA	-14	NA	30477422	30522609	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_30477487_30481142_30481258_30484213_30484302_30484662_30484771_30490125_30490218_30492678_30492754_30510879_30510910_30519938_30520022_30522253
transcript_84490.known	chr17	+	947	9	FSM	ENSG00000108587.16	ENST00000414833.2	947	9	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	151.658281590555	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTTTTCTAACACATT	30468694	True	NA	NA	False	NA	NA	NA	30477441	30522558	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_30477487_30481142_30481264_30484213_30484302_30484662_30484771_30490125_30490218_30492678_30492754_30510879_30510910_30519938_30520022_30522253
transcript_8450.nnic	chr1	-	1766	15	NIC	ENSG00000132781.20	novel	1776	16	NA	NA	15	0	combination_of_known_splicesites	FALSE	canonical	1	21	junction_10	77.3894207820397	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATGTTGTATTTTTTT	-45340103	False	NA	-3	True	AGTAAA	-19	NA	45340148	45329242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45333096_45333171_45333284_45333325_45333412_45333562_45334390_45334512_45339975
transcript_84500.known	chr17	+	584	5	FSM	ENSG00000108587.16	ENST00000467635.6	584	5	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_2	85.3126602562597	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAACATTGCTGCTACA	30468669	True	NA	NA	False	NA	NA	NA	30477416	30490350	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_30477465_30481142_30481258_30484213_30484302_30484662_30484771_30490125
transcript_84504.known	chr17	+	723	4	FSM	ENSG00000108587.16	ENST00000491489.6	723	4	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_2	133.389154981455	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGGGAATTATTTACTATA	30468675	True	NA	NA	False	NA	NA	NA	30477422	30485134	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_30477465_30481142_30481264_30484213_30484302_30484662
transcript_8451.nnic	chr1	-	1789	15	NIC	ENSG00000132781.20	novel	1888	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	21	junction_10	77.4849886712759	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATGTTGTATTTTTTT	-45339320	True	NA	-3	True	AGTAAA	-19	NA	45340414	45329242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45333096_45333171_45333284_45333325_45333412_45333562_45334390_45334512_45340218
transcript_84514.known	chr17	+	1273	7	FSM	ENSG00000214719.13	ENST00000651170.1	1273	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	24.415955621046	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTAAGAAGTTAAGTTG	30600156	False	NA	NA	False	AATAAA	-22	NA	30600891	30634326	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_30601013_30607551_30607666_30608429_30608563_30610888_30610943_30631754_30631980_30633097_30633391_30633993
transcript_84523.nic	chr17	+	2858	6	NIC	ENSG00000214719.13	novel	1273	7	NA	NA	-470	0	intron_retention	FALSE	canonical	3	60	junction_1	14.2772546380598	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTATTTTAAGAAGTTAAG	30599510	True	NA	NA	False	AATAAA	-19	NA	30600421	30634323	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_30601013_30607551_30607666_30608429_30608563_30610888_30610943_30631754_30633391_30633993
transcript_84527.nic	chr17	+	1334	5	ISM	ENSG00000214719.13	ENST00000651170.1	1273	7	-531	2191	-531	-2027	5prime_fragment	FALSE	canonical	3	60	junction_1	12.1114615137893	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGAAACTGCGCAACCACA	NA	False	NA	NA	False	TTTAAA	-23	NA	30600360	30632135	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_30601013_30607551_30607666_30608429_30608563_30610888_30610943_30631754
transcript_84542.known	chr17	-	2873	8	FSM	ENSG00000176390.12	ENST00000324238.7	2873	8	0	0	0	0	multi-exon	FALSE	canonical	2	86	junction_2	28.7487355533833	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTACTTTTTTCTTC	-30818630	True	NA	-7	True	AATAAA	-17	NA	30824692	30782683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_30784444_30785918_30786032_30792439_30792573_30793449_30793673_30796159_30796338_30797310_30797399_30803900_30804109_30824522
transcript_84559.nic	chr17	+	2430	3	ISM	ENSG00000176208.9	ENST00000578295.5	4051	15	-39	39188	-35	-32601	5prime_fragment	FALSE	canonical	3	74	junction_2	5	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTAACAAAAGATCTGAGAA	30828851	True	NA	NA	False	AAGAAA	-4	NA	30831930	30837251	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_30832414_30834147_30836049_30837205
transcript_84560.nic	chr17	+	788	2	ISM	ENSG00000176208.9	ENST00000578295.5	4051	15	-39	41987	-35	-35400	5prime_fragment	FALSE	canonical	3	84	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATATTAAAACTGAAAATG	30828851	True	NA	NA	False	ACTAAA	-1	NA	30831930	30834452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_30832414_30834147
transcript_84563.nic	chr17	+	1847	2	ISM	ENSG00000176208.9	ENST00000578295.5	4051	15	-39	40928	-35	-34341	5prime_fragment	FALSE	canonical	3	84	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCTAAAGAAGAAGAATAAGA	30828851	True	NA	NA	False	AATAAA	-3	NA	30831930	30835511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_30832414_30834147
transcript_84564.nic	chr17	+	1901	2	ISM	ENSG00000176208.9	ENST00000578295.5	4051	15	-39	40874	-35	-34287	5prime_fragment	FALSE	canonical	3	84	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGAGAGGGAAACACTCAAA	30828851	True	NA	NA	False	AAGAAA	-33	NA	30831930	30835565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_30832414_30834147
transcript_84565.known	chr17	-	1262	4	FSM	ENSG00000172171.11	ENST00000306049.9	1262	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	56.8760836282606	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCCTCTCAGGTTAA	-30905503	True	NA	-3	True	AATAAA	-13	NA	30906235	30898985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_30899607_30900412_30900522_30904065_30904530_30906167
transcript_84566.known	chr17	-	1306	4	FSM	ENSG00000172171.11	ENST00000581216.6	1306	4	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_3	4.54606056566195	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCCTCTCAGGTTAA	-30905506	True	NA	-3	True	AATAAA	-13	NA	30906238	30898985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_30899607_30900412_30900563_30904065_30904530_30906167
transcript_84567.nnic	chr17	-	1298	4	NNC	ENSG00000172171.11	novel	1306	4	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	55.6496980125579	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCCTCTCAGGTTAA	-30905521	True	NA	-3	True	AATAAA	-13	NA	30906253	30898985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_30899607_30900412_30900563_30904065_30904530_30906190
transcript_84568.known	chr17	-	2109	3	FSM	ENSG00000172171.11	ENST00000580840.1	2109	3	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	5.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCCTCTCAGGTTAA	-30905503	True	NA	-3	True	AATAAA	-13	NA	30906235	30898985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_30900563_30904065_30904530_30906167
transcript_84573.known	chr17	-	559	2	FSM	ENSG00000172171.11	ENST00000541382.2	559	2	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATATTTGAGAACCTACT	-30905503	True	NA	NA	False	NA	NA	NA	30906235	30904038	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_30904530_30906167
transcript_84576.known	chr17	+	2098	6	FSM	ENSG00000181481.14	ENST00000535306.6	2098	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	35.8407589205363	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTGAGTTCTGTGAGT	30969916	True	NA	21	True	AATAAA	-21	NA	30971059	30999911	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_30971446_30984616_30984761_30987943_30988107_30993839_30993905_30997241_30997332_30998661
transcript_84577.known	chr17	+	2054	5	FSM	ENSG00000181481.14	ENST00000328381.10	2054	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	13.8270568090248	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTGAGTTCTGTGAGT	30969895	True	NA	21	True	AATAAA	-21	NA	30971038	30999911	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_30971446_30984616_30984761_30987943_30988107_30997241_30997332_30998661
transcript_84580.known	chr17	+	1905	4	FSM	ENSG00000181481.14	ENST00000324689.8	1905	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	28.0158685192676	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGCTGAGTTCTGTGA	30969879	True	NA	19	True	AATAAA	-19	NA	30971022	30999909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_30971446_30984616_30984761_30997241_30997332_30998661
transcript_84582.nic	chr17	+	4569	31	ISM	ENSG00000196712.19	ENST00000358273.9	12373	58	-66	124678	-16	-1295	5prime_fragment	TRUE	canonical	2	3	junction_4	4.49703606093317	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTAAGTTTGGAGAACTT	31094399	True	NA	NA	False	AATAAA	-34	NA	31094910	31252997	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_31095370_31155982_31156127_31159009_31159094_31163185_31163377_31169890_31169998_31181421_31181490_31181709_31181786_31182507_31182666_31200421_31200596_31201036_31201160_31201410_31201486_31206239_31206372_31214450_31214586_31219004_31219119_31221849_31221930_31223443_31223568_31225094_31225251_31226434_31226685_31227217_31227292_31227522_31227607_31229024_31229466_31229834_31229975_31230259_31230383_31230841_31230926_31232072_31232190_31232699_31232882_31233001_31233214_31235610_31235773_31235917_31236022_31248983_31249120_31252937
transcript_84595.nnic	chr17	+	4693	14	NNC	ENSG00000131242.18	novel	1968	13	NA	NA	-11	-2930	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	45.5848256699633	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCAAGAACCTGCACGAGG	31484753	True	NA	NA	False	NA	NA	NA	31487988	31535281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_31488273_31517650_31517878_31521165_31521361_31521914_31522050_31522359_31522396_31523511_31523612_31523892_31523997_31525089_31525231_31527841_31527924_31528405_31528544_31528619_31528779_31530325_31530470_31531615_31534474_31535191
transcript_84598.known	chr17	+	1968	13	FSM	ENSG00000131242.18	ENST00000394744.6	1968	13	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_3	20.6599451435219	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCGTTACGTGTACCCGTG	31484764	True	NA	NA	False	NA	NA	NA	31487999	31531849	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_31488273_31517650_31517878_31521165_31521361_31521914_31522050_31522359_31522396_31523511_31523612_31523892_31523997_31525089_31525231_31527841_31527924_31528405_31528544_31528619_31528779_31530325_31530470_31531615
transcript_84600.nnic	chr17	+	2986	12	NIC	ENSG00000131242.18	novel	1968	13	NA	NA	-13	1197	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	48.0683053942104	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCCCCCTGCAGTTTCT	31484751	True	NA	28	True	TATAAA	-15	NA	31487986	31533049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_31488273_31517650_31517878_31521914_31522050_31522359_31522396_31523511_31523612_31523892_31523997_31525089_31525231_31527841_31527924_31528405_31528544_31528619_31528779_31530325_31530470_31531615
transcript_84602.known	chr17	-	868	4	FSM	ENSG00000172301.11	ENST00000302362.11	868	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	258.25955935841	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTATGCTTCGTCTGCTT	-31855238	True	NA	-6	True	AATAAA	-16	NA	31859244	31851870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_31852309_31852811_31853031_31856798_31856866_31859100
transcript_84603.known	chr17	-	422	3	FSM	ENSG00000172301.11	ENST00000579984.1	422	3	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_2	284	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACCATCCGCCTCCACTG	-31855207	True	NA	NA	False	NA	NA	NA	31859213	31852218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_31852309_31852811_31853031_31859100
transcript_84605.nic	chr17	-	2187	20	NIC	ENSG00000108651.10	novel	4330	19	NA	NA	-66	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	146.331048049512	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGGGTCTTGCTCTGTT	NA	False	NA	-8	True	ATTAAA	-16	NA	31901774	31863173	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_31863517_31865365_31865439_31866654_31866716_31868045_31868113_31873377_31873488_31873672_31873754_31875233_31875414_31878249_31878328_31878701_31878782_31880572_31880755_31884423_31884506_31885979_31886062_31887235_31887314_31889284_31889404_31892259_31892324_31892746_31892795_31894644_31894738_31894969_31895012_31899645_31899731_31901535
transcript_84612.known	chr17	-	4330	19	FSM	ENSG00000108651.10	ENST00000261708.9	4330	19	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_7	26.4425769648726	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAGTCTACTTTAGAACA	-31893878	True	NA	-30	True	ATTAAA	-13	NA	31901708	31860903	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_31863517_31865365_31865439_31868045_31868113_31873377_31873488_31873672_31873754_31875233_31875414_31878249_31878328_31878701_31878782_31880572_31880755_31884423_31884506_31885979_31886062_31887235_31887314_31889284_31889404_31892259_31892324_31892746_31892795_31894644_31894738_31894969_31895012_31899645_31899731_31901535
transcript_84616.nnic	chr17	-	2046	18	NIC	ENSG00000108651.10	novel	4330	19	NA	NA	-66	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_7	114.732395126004	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGGGTCTTGCTCTGTT	NA	False	NA	-8	True	ATTAAA	-16	NA	31901774	31863173	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_31863517_31865365_31865439_31868045_31868113_31873377_31873488_31873672_31873754_31875233_31875414_31878249_31878328_31880572_31880755_31884423_31884506_31885979_31886062_31887235_31887314_31889284_31889404_31892259_31892324_31892746_31892795_31894644_31894738_31894969_31895012_31899645_31899731_31901535
transcript_84634.known	chr17	+	4495	16	FSM	ENSG00000178691.11	ENST00000322652.10	4495	16	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_6	31.5845250434801	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCTGTTTTGGGGTTTTT	31931777	True	NA	13	True	TATAAA	-6	NA	31937006	32001038	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_31937521_31940285_31940333_31940421_31940487_31947616_31947686_31966146_31966197_31973145_31973232_31975481_31975714_31976520_31976615_31982998_31983105_31988319_31988498_31993241_31993334_31993864_31994009_31994563_31994722_31995563_31995763_31996797_31996878_31998657
transcript_84657.known	chr17	+	3977	15	FSM	ENSG00000178691.11	ENST00000580398.1	3977	15	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	70.2815039389338	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTATTTTAGGGGAGATGT	31931837	True	NA	39	True	NA	NA	NA	31937066	32000649	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_31937521_31940285_31940333_31940421_31940487_31966146_31966197_31973145_31973232_31975481_31975714_31976520_31976615_31982998_31983105_31988319_31988498_31993241_31993334_31993864_31994009_31994563_31994722_31995563_31995763_31996797_31996878_31998657
transcript_84672.nic	chr17	+	1512	11	ISM	ENSG00000178691.11	ENST00000322652.10	4495	16	-25	7751	-25	-6089	5prime_fragment	FALSE	canonical	3	244	junction_6	22.0172659519751	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATACTCCAAATGAAAACC	31931752	True	NA	NA	False	AAGAAA	-7	NA	31936981	31993287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_31937521_31940285_31940333_31940421_31940487_31947616_31947686_31966146_31966197_31973145_31973232_31975481_31975714_31976520_31976615_31982998_31983105_31988319_31988498_31993241
transcript_84681.nic	chr17	+	1443	10	ISM	ENSG00000178691.11	ENST00000580398.1	3977	15	-85	7362	-25	-6089	5prime_fragment	FALSE	canonical	3	47	junction_3	76.3235478120435	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATACTCCAAATGAAAACC	31931752	True	NA	NA	False	AAGAAA	-7	NA	31936981	31993287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_31937521_31940285_31940333_31940421_31940487_31966146_31966197_31973145_31973232_31975481_31975714_31976520_31976615_31982998_31983105_31988319_31988498_31993241
transcript_84690.nic	chr17	+	1847	6	ISM	ENSG00000178691.11	ENST00000322652.10	4495	16	-25	26816	-25	6633	5prime_fragment	FALSE	canonical	3	251	junction_1	25.0391693152948	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATGTAAAGTTAGGAAAT	31931752	True	NA	NA	False	AAGAAA	-10	NA	31936981	31974222	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_31937521_31940285_31940333_31940421_31940487_31947616_31947686_31966146_31966197_31973145
transcript_84703.known	chr17	+	3091	15	FSM	ENSG00000185158.12	ENST00000543378.6	3091	15	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	23.7366503835013	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTAATGGTAATAAATT	32007931	True	NA	91	True	AATAAA	-19	NA	32007987	32053486	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_32008133_32017971_32018055_32020696_32020804_32021392_32022826_32024710_32024783_32027768_32027841_32030655_32030728_32031377_32031459_32034909_32034982_32035564_32035640_32045699_32045819_32047760_32047902_32049101_32049395_32050002_32050108_32053265
transcript_84709.nic	chr17	+	3551	14	NIC	ENSG00000185158.12	novel	3091	15	NA	NA	-500	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	21.1425144474295	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTTTACTTTGTGGTTG	32006690	True	NA	18	True	ATTAAA	-30	NA	32007371	32053413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_32008133_32020696_32020804_32021392_32022826_32024710_32024783_32027768_32027841_32030655_32030728_32031377_32031459_32034909_32034982_32035564_32035640_32045699_32045819_32047760_32047902_32049101_32049395_32050002_32050108_32053265
transcript_84710.nic	chr17	+	3624	14	NIC	ENSG00000185158.12	novel	3091	15	NA	NA	-500	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	21.1425144474295	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTAATGGTAATAAATT	32006690	True	NA	91	True	AATAAA	-19	NA	32007371	32053486	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_32008133_32020696_32020804_32021392_32022826_32024710_32024783_32027768_32027841_32030655_32030728_32031377_32031459_32034909_32034982_32035564_32035640_32045699_32045819_32047760_32047902_32049101_32049395_32050002_32050108_32053265
transcript_84721.known	chr17	+	431	3	FSM	ENSG00000264164.1	ENST00000358484.4	431	3	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	13.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGACACATGGACATAACTG	32082824	False	NA	NA	False	AAGAAA	-17	NA	32083178	32096989	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_32083323_32095061_32095202_32096842
transcript_84725.nic	chr17	+	439	2	ISM	ENSG00000264164.1	ENST00000358484.4	431	3	-155	1788	-155	-1788	5prime_fragment	FALSE	canonical	3	101	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTATTTTATCCAAAAG	NA	False	NA	NA	False	NA	NA	NA	32083023	32095201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_32083323_32095061
transcript_84727.known	chr17	+	860	1	FSM	ENSG00000277511.1	ENST00000613639.1	860	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGACTCATTTATTTAT	32127538	True	NA	NA	False	ATTAAA	-16	NA	32127594	32128454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_32127600_32128500
transcript_84739.known	chr17	+	3165	20	FSM	ENSG00000126858.19	ENST00000545287.7	3165	20	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_18	55.4373195500285	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTTCTTTTGTCATC	32139671	True	NA	10	True	AATAAA	-20	NA	32142501	32225727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_32142730_32171042_32171102_32173830_32173913_32175318_32175363_32175961_32176016_32176160_32176214_32182756_32182866_32183170_32183273_32192200_32192300_32193135_32193245_32193986_32194108_32198946_32199032_32199404_32199551_32200955_32201057_32202769_32202901_32203889_32203974_32206909_32207030_32208106_32208310_32211115_32211239_32224615
transcript_84740.known	chr17	+	2919	19	FSM	ENSG00000126858.19	ENST00000354266.7	2919	19	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	54.0625209626735	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATTTTTTCCATCATCAG	32139729	True	NA	23	True	AATAAA	-29	NA	32142559	32225666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_32142730_32171046_32171102_32173830_32173913_32175318_32175363_32175961_32176016_32176160_32176214_32182756_32182866_32183170_32183273_32192200_32192300_32193135_32193245_32193986_32194108_32198946_32199032_32199404_32199551_32200955_32201057_32202769_32202901_32203889_32203974_32206909_32207030_32208106_32208310_32224615
transcript_84741.known	chr17	+	3297	21	FSM	ENSG00000126858.19	ENST00000358365.7	3297	21	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_19	65.541494490132	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTTCTTTTGTCATC	32139635	True	NA	10	True	AATAAA	-20	NA	32142465	32225727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_32142730_32171042_32171102_32173830_32173913_32175318_32175363_32175961_32176016_32176160_32176214_32182756_32182866_32183170_32183273_32192200_32192300_32193135_32193245_32193986_32194108_32198946_32199032_32199404_32199551_32200955_32201057_32202769_32202901_32203889_32203974_32206909_32207030_32208106_32208310_32209349_32209446_32211115_32211239_32224615
transcript_84745.known	chr17	+	13740	12	FSM	ENSG00000010244.19	ENST00000394670.9	13740	12	0	0	0	0	multi-exon	FALSE	canonical	3	442	junction_8	256.136262805498	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATACTTGTCTGAGCCCAT	32329830	True	NA	6	True	AATAAA	-20	NA	32350156	32381885	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_32350327_32351785_32351913_32358502_32358642_32360597_32360766_32360891_32360968_32361467_32361516_32362913_32362985_32365329_32365488_32366664_32366758_32367771_32368015_32369294_32369455_32369598
transcript_84751.known	chr17	+	2124	11	FSM	ENSG00000010244.19	ENST00000394673.6	2124	11	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_8	182.635949363755	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCCTTTTTATTCATAAC	32329811	True	NA	18	True	AATAAA	-15	NA	32350137	32370343	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_32350327_32351785_32351913_32358502_32358642_32360597_32360766_32360891_32360968_32361467_32361516_32362913_32362985_32365329_32365488_32367771_32368015_32369294_32369455_32369598
transcript_84754.known	chr17	+	2283	11	FSM	ENSG00000010244.19	ENST00000321233.10	2283	11	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	387.420043363789	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATATATCATTGGATTC	32329805	True	NA	12	True	AATAAA	-22	NA	32350131	32370451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_32350327_32351785_32351913_32358502_32358642_32360597_32360766_32360891_32360968_32362913_32362985_32365329_32365488_32366664_32366758_32367771_32368015_32369294_32369455_32369598
transcript_84757.nnic	chr17	-	2114	11	NNC	ENSG00000108666.10	novel	4547	10	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	195.576685727108	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGTTGTTTTTGTTTAAT	-32342180	False	NA	-1	True	AATAAA	-18	NA	32342206	32328440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_32328658_32331123_32331979_32333416_32333521_32334468_32334606_32334774_32334840_32335322_32335443_32337896_32337955_32338207_32338352_32339812_32339939_32341203_32341285_32341999
transcript_84764.known	chr17	-	4547	10	FSM	ENSG00000108666.10	ENST00000577809.6	4547	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	156.053409660496	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGTTGTTTTTGTTTAAT	-32340115	True	NA	-1	True	AATAAA	-18	NA	32342173	32328440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_32331979_32333416_32333521_32334468_32334606_32334774_32334840_32335322_32335443_32337896_32337955_32338207_32338352_32339812_32339939_32341203_32341285_32341999
transcript_84772.known	chr17	-	776	7	FSM	ENSG00000108666.10	ENST00000583221.5	776	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	215.133033777294	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGACATTAACAGGTAAAG	-32342183	False	NA	NA	False	AAAACA	-4	NA	32342209	32334788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_32334840_32335322_32335443_32337896_32337955_32338207_32338352_32339812_32339925_32341203_32341285_32341999
transcript_84775.nic	chr17	+	473	3	ISM	ENSG00000010244.19	ENST00000577324.1	1005	5	-85	2699	-19	0	5prime_fragment	FALSE	canonical	3	1161	junction_1	25	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACAAGGTAAATATTGGGA	NA	False	NA	-3	True	AAAAAG	-36	NA	32350112	32358634	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_32350327_32351785_32351913_32358502
transcript_84784.known	chr17	+	3850	14	FSM	ENSG00000108671.11	ENST00000261712.8	3850	14	0	0	0	0	multi-exon	FALSE	canonical	3	2004	junction_13	131.193068802339	2319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTCCCTTTTACTTGT	32411336	True	NA	NA	False	AATAAA	-19	NA	32444509	32483319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_32444615_32446944_32447047_32454494_32454620_32464048_32464121_32464520_32464579_32468998_32469194_32473800_32473946_32474763_32474825_32477520_32477584_32479250_32479377_32479850_32479887_32480145_32480198_32480488_32480632_32480752
transcript_84785.known	chr17	+	3317	14	FSM	ENSG00000108671.11	ENST00000649012.1	3317	14	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_13	566.567459699666	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAATATATTATTAAAA	32411287	True	NA	NA	False	NA	NA	NA	32444460	32483295	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_32444615_32446944_32447047_32454494_32454620_32464048_32464121_32464520_32464579_32468998_32469194_32473800_32473946_32474763_32474825_32477520_32477584_32479250_32479377_32479850_32479887_32480145_32480198_32480488_32480632_32481310
transcript_84798.known	chr17	+	2159	13	FSM	ENSG00000108671.11	ENST00000457654.6	2159	13	0	0	0	0	multi-exon	FALSE	canonical	3	2025	junction_5	125.172630794435	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTAGCCCCCAAGGGGCCT	32411300	True	NA	NA	False	NA	NA	NA	32444473	32481471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_32444615_32446944_32447047_32454494_32454620_32464048_32464121_32464520_32464579_32468998_32469194_32473800_32473946_32474763_32474825_32477520_32477584_32479250_32479377_32479850_32479887_32480145_32480198_32480488
transcript_84817.known	chr17	+	3948	2	FSM	ENSG00000176749.9	ENST00000313401.4	3948	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGAGACCTCTTTTTGT	32486826	False	NA	69	True	AATAAA	-17	NA	32486992	32491253	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_32487163_32487475
transcript_84820.known	chr17	-	5510	22	FSM	ENSG00000176658.17	ENST00000318217.10	5510	22	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_21	14.1114771320395	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAGAATTAAGCACAAATC	-32874908	True	NA	75	True	AATAAA	-27	NA	32877124	32492521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_32494916_32605086_32605242_32638721_32638836_32653842_32653948_32654476_32654622_32659114_32659339_32711987_32712196_32721022_32721190_32738252_32738386_32745210_32745286_32748935_32749007_32755491_32755663_32760289_32760405_32760481_32760628_32764877_32765082_32767635_32767753_32771124_32771221_32772788_32772843_32775863_32776030_32778479_32778574_32780575_32780785_32876777
transcript_84821.known	chr17	-	3500	22	FSM	ENSG00000176658.17	ENST00000579584.5	3500	22	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	25.7391414262509	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAAGAAAATATGTCTG	-32874928	True	NA	NA	False	AATAAA	-20	NA	32877144	32594202	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_32594567_32605086_32605242_32638721_32638836_32653842_32653948_32654476_32654622_32659114_32659339_32711987_32712196_32721022_32721190_32738252_32738386_32745210_32745286_32748935_32749007_32755491_32755663_32760289_32760405_32760481_32760628_32764877_32765082_32767635_32767753_32771124_32771221_32772788_32772843_32775863_32776030_32778479_32778574_32780575_32780785_32876777
transcript_84828.nnic	chr17	-	2287	15	NNC	ENSG00000176658.17	novel	427	5	NA	NA	-36	1710	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	31.8043284180385	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATTTCTGTATCAGGAA	-32874997	True	NA	NA	False	AATAAA	-16	NA	32877213	32736647	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_32736848_32738252_32738386_32745210_32745286_32748935_32749007_32755491_32755663_32760289_32760405_32760481_32760628_32764877_32765082_32767635_32767753_32771124_32771221_32772788_32772843_32775863_32776030_32778479_32778574_32780575_32780785_32876777
transcript_84829.known	chr17	-	1916	11	FSM	ENSG00000176658.17	ENST00000583621.1	1916	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	35.8892741637387	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTGTGTATTACACTT	-32874961	True	NA	NA	False	ATTAAA	-20	NA	32877177	32759811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_32760127_32760289_32760405_32760481_32760628_32764877_32765082_32767635_32767753_32771124_32771221_32772788_32772843_32775863_32776030_32778479_32778574_32780575_32780785_32876777
transcript_84830.known	chr17	+	1683	7	FSM	ENSG00000006042.12	ENST00000394642.7	1683	7	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	190.707818985542	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTGGATAGTAAATTTATA	32927717	False	NA	-14	True	NA	NA	NA	32927909	32941613	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_32928238_32931474_32931660_32933173_32933306_32934290_32934325_32936331_32936448_32939476_32939537_32940785
transcript_84836.known	chr17	+	4218	8	FSM	ENSG00000006042.12	ENST00000579849.6	4218	8	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_1	81.8617550433382	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCTGTGGAAGAGGGTT	32922666	True	NA	NA	False	AATAAA	-13	NA	32928152	32944315	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_32928238_32931326_32931403_32931474_32931660_32933173_32933306_32934290_32934325_32936331_32936448_32939476_32939537_32940785
transcript_84837.known	chr17	+	1937	3	FSM	ENSG00000263571.3	ENST00000667899.1	1937	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	4.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGAGAGATGCTCAGAAA	34155586	False	NA	NA	False	NA	NA	NA	34155613	34162199	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_34156703_34159042_34159116_34161424
transcript_84838.known	chr17	+	741	3	FSM	ENSG00000108691.9	ENST00000225831.4	741	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	4	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACTTCCAGTGTTTTCT	34254766	True	NA	NA	False	AATAAA	-18	NA	34255284	34257203	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_34255426_34256221_34256340_34256721
transcript_84845.known	chr17	+	3055	20	FSM	ENSG00000005156.12	ENST00000262327.9	3055	20	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_19	74.4031095766934	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGGAAGCAGGTCCAGCAA	34973514	True	NA	NA	False	NA	NA	NA	34980545	35003172	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_34980623_34983001_34983553_34985987_34986132_34989465_34989664_34990962_34991115_34991670_34991838_34991957_34992036_34992523_34992693_34994275_34994432_34996063_34996196_34996573_34996654_34997737_34997826_34998218_34998297_34998603_34998728_34999306_34999450_34999781_34999857_35001256_35001404_35001908_35002105_35002667_35002790_35002994
transcript_84848.known	chr17	+	8382	20	FSM	ENSG00000005156.12	ENST00000378526.9	8382	20	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_1	26.1802826993153	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCTAGGAGGGAAACTGA	34973480	True	NA	NA	False	NA	NA	NA	34980511	35009743	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_34980623_34983001_34983553_34985987_34986132_34989465_34989664_34990962_34991115_34991670_34991838_34991957_34992036_34992523_34992693_34994275_34994432_34996063_34996196_34996573_34996654_34997737_34997826_34998218_34998297_34998603_34998728_34999306_34999450_34999781_34999857_35001256_35001404_35001908_35002105_35002667_35002790_35004272
transcript_84881.known	chr17	-	1847	14	FSM	ENSG00000132141.14	ENST00000314144.10	1847	14	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_11	3.39334538463274	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATAATATTTAAATATTT	-34961318	True	NA	60	True	AATAAA	-16	NA	34961460	34927860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_34928118_34928961_34929035_34930948_34931052_34932366_34932501_34939182_34939331_34939616_34939714_34940538_34940622_34942483_34942644_34942795_34942907_34951949_34952054_34954425_34954600_34958559_34958695_34959586_34959651_34961256
transcript_84883.known	chr17	-	1639	13	FSM	ENSG00000132141.14	ENST00000436961.7	1639	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	3.93347457373532	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGTCTTAATAGTCTC	-34961316	True	NA	-11	True	AATAAA	-14	NA	34961458	34927931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_34928118_34928961_34929035_34930948_34931052_34932366_34932501_34939182_34939331_34939616_34939714_34940538_34940622_34942483_34942644_34942795_34942907_34951949_34952054_34954425_34954600_34959586_34959651_34961256
transcript_84891.known	chr17	-	7293	7	FSM	ENSG00000092871.17	ENST00000315249.11	7293	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_5	11.3968806648525	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAACATTGTTGGTATTAT	NA	False	NA	NA	False	ATTAAA	-20	NA	35089319	35005989	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_35012150_35014739_35014764_35016369_35016581_35017522_35017607_35021370_35021782_35026373_35026562_35089104
transcript_84899.known	chr17	+	2238	1	FSM	ENSG00000198783.6	ENST00000361952.5	2238	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAAGACCTATATATTTCT	34958983	True	NA	NA	False	AATAAA	-21	NA	34961539	34963777	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_34961500_34963800
transcript_84902.known	chr17	-	9966	10	FSM	ENSG00000185379.21	ENST00000345365.11	9966	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_7	14.0712472794703	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTCCTATAAATATGTCA	-35119849	False	NA	-19	True	AATAAA	-17	NA	35119860	35092220	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_35101037_35101200_35101366_35103253_35103325_35103453_35103545_35106385_35106482_35106987_35107123_35107365_35107448_35118500_35118620_35119110_35119173_35119531
transcript_84906.known	chr17	-	1528	10	FSM	ENSG00000185379.21	ENST00000590016.5	1528	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	25.4009818027416	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGGAGCATCTCTGATG	-35119527	True	NA	NA	False	NA	NA	NA	35119813	35100671	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_35101037_35101200_35101366_35103253_35103325_35103453_35103545_35106385_35106482_35106987_35107123_35107365_35107448_35116858_35117038_35119110_35119173_35119531
transcript_84913.known	chr17	-	1571	9	FSM	ENSG00000185379.21	ENST00000586044.5	1571	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	17.3956711569287	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTAGAGCCACCTGATT	-35119735	False	286	-12	True	TATAAA	-15	NA	35119746	35100382	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_35101037_35101200_35101366_35103253_35103325_35103453_35103545_35106385_35106482_35106987_35107123_35107365_35107448_35119110_35119173_35119531
transcript_84918.known	chr17	-	1064	9	FSM	ENSG00000185379.21	ENST00000460118.6	1064	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	25.0586811304985	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATCTTGGGTTCCTTGGC	-35119733	False	286	NA	False	NA	NA	NA	35119744	35100826	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_35101037_35101200_35101366_35103253_35103325_35103453_35103545_35106385_35106482_35106987_35107062_35107365_35107448_35119110_35119173_35119531
transcript_84926.known	chr17	-	1353	7	FSM	ENSG00000185379.21	ENST00000335858.11	1353	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	22.0661883130428	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTAGAGCCACCTGATT	-35119734	False	286	-12	True	TATAAA	-15	NA	35119745	35100382	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_35101037_35101200_35101366_35103253_35103325_35103453_35103545_35106385_35106482_35119110_35119173_35119531
transcript_84929.nic	chr17	-	1972	14	NIC	ENSG00000073536.18	novel	5193	13	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	80.1348715175615	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTTGTGTGTTGGGTTC	-35136933	True	NA	-48	True	NA	NA	NA	35142306	35132070	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_35132450_35133170_35133242_35133338_35133499_35134942_35135060_35135248_35135452_35136168_35136216_35136361_35136498_35137000_35137194_35137542_35137641_35137813_35137891_35139234_35139315_35139848_35140067_35141978_35142123_35142257
transcript_84932.known	chr17	-	5193	13	FSM	ENSG00000073536.18	ENST00000442241.9	5193	13	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_12	32.8032857432842	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCCCCCCAACCGGATCC	-35136930	True	NA	13	True	AATAAA	-39	NA	35142303	35128729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_35132450_35133170_35133242_35133338_35133499_35135248_35135452_35136168_35136216_35136361_35136498_35137000_35137194_35137542_35137641_35137813_35137891_35139234_35139315_35139848_35140067_35141978_35142123_35142257
transcript_84946.known	chr17	-	2658	2	FSM	ENSG00000266947.2	ENST00000590478.1	2658	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCTGAAGACATACATTCA	-35242897	True	NA	NA	False	AATAAA	-14	NA	35242963	35231449	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_35232643_35241498
transcript_84947.known	chr17	+	1343	4	FSM	ENSG00000267364.3	ENST00000664469.1	1343	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGGTTATTTCCAGGT	NA	False	NA	NA	False	AATATA	-31	NA	35313485	35325448	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_35313707_35321734_35321866_35323147_35323344_35324653
transcript_84953.known	chr17	-	2506	4	FSM	ENSG00000172123.13	ENST00000304905.10	2506	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	5.8878405775519	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTCTCAAAACAAAACTCCA	-35432195	True	NA	NA	False	AATGAA	-19	NA	35432500	35410921	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_35411928_35420273_35420382_35421989_35423069_35432187
transcript_84955.known	chr17	-	2423	4	FSM	ENSG00000172123.13	ENST00000452764.3	2423	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	14.7196014438797	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTGGGAAAATTGCAACAC	-35433258	False	NA	-11	True	AATAAA	-17	NA	35433283	35411070	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_35411928_35420273_35420382_35421989_35423069_35432904
transcript_84957.known	chr17	-	751	3	FSM	ENSG00000172123.13	ENST00000447040.6	751	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	7.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCGGATTACCACCTTG	-35433005	True	NA	NA	False	NA	NA	NA	35433199	35422682	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_35423069_35432187_35432258_35432904
transcript_84965.known	chr17	-	3910	7	FSM	ENSG00000154760.14	ENST00000530782.5	3910	7	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_4	22.4326151445217	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGTCTCTAGTGTTTTG	-35447066	True	NA	-8	True	AATAAA	-18	NA	35448837	35438983	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_35441367_35441562_35442287_35443788_35443921_35444614_35444702_35445372_35445694_35447267_35447415_35448721
transcript_84966.known	chr17	-	3058	7	FSM	ENSG00000154760.14	ENST00000534689.5	3058	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	25.7207222984806	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGCAGTGAGTTTATG	-35446993	True	NA	NA	False	AAAAAG	-13	NA	35448764	35439479	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_35441367_35441562_35442287_35443788_35443921_35444614_35444702_35445655_35445694_35447267_35447415_35448721
transcript_84967.known	chr17	-	6004	7	FSM	ENSG00000154760.14	ENST00000526861.5	6004	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	29.4698527689268	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGTTTCACGAATTAA	-35447011	True	NA	NA	False	NA	NA	NA	35448782	35437542	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_35441367_35441562_35442287_35443788_35443921_35444614_35445694_35446716_35446754_35447267_35447415_35448721
transcript_84976.known	chr17	-	8398	6	FSM	ENSG00000154760.14	ENST00000285013.11	8398	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	12.3773987574126	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATGTTTTTACTCTGC	-35446995	True	NA	NA	False	AATAAA	-19	NA	35448766	35435095	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_35441367_35441562_35442287_35443788_35443921_35444614_35445694_35447267_35447415_35448721
transcript_84988.known	chr17	+	5700	22	FSM	ENSG00000006125.18	ENST00000610402.5	5700	22	0	0	0	0	multi-exon	TRUE	canonical	2	74	junction_14	66.82409982529	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTTTGTGGTATGTATT	35580321	True	NA	NA	False	AATAAA	-18	NA	35587321	35726413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_35587429_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598_35657792_35670856_35670899_35671753_35671901_35674175_35674322_35682694_35682825_35709223_35709309_35710233_35710321_35717194_35717350_35723624
transcript_84993.known	chr17	+	3415	22	FSM	ENSG00000006125.18	ENST00000618940.4	3415	22	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	83.5431643969769	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTGCACTTTACTGTT	35587400	False	NA	14	True	ATTAAA	-20	NA	35587514	35724086	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_35587664_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598_35657792_35670856_35670899_35671753_35671901_35674175_35674322_35682694_35682825_35709223_35709309_35710233_35710321_35717194_35717350_35723624
transcript_84999.known	chr17	+	5702	21	FSM	ENSG00000006125.18	ENST00000621914.4	5702	21	0	0	0	0	multi-exon	FALSE	canonical	2	188	junction_9	38.4008788961919	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAAGTTTGTGGTATG	35587142	False	NA	NA	False	AATAAA	-14	NA	35587273	35726409	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_35587429_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598_35657792_35671753_35671901_35674175_35674322_35682694_35682825_35709223_35709309_35710233_35710321_35717194_35717350_35723624
transcript_85002.nic	chr17	+	3464	21	NIC	ENSG00000006125.18	novel	3428	22	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	2	49	junction_1	59.9728897086008	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGCACTTTACTGTTTTA	35580360	True	NA	17	True	ATTAAA	-23	NA	35587360	35724089	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_35587598_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598_35657792_35671753_35671901_35674175_35674322_35682694_35682825_35709223_35709309_35710233_35710321_35717194_35717350_35723624
transcript_85010.nic	chr17	+	2548	15	NIC	ENSG00000006125.18	novel	2161	15	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	2	30	junction_14	69.0255794053545	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGTACAAGAGAGGGT	35587138	False	NA	12	True	AATAAA	-24	NA	35587249	35660120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_35587429_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598_35657792_35659763
transcript_85013.known	chr17	+	2542	14	FSM	ENSG00000006125.18	ENST00000616784.4	2542	14	0	0	0	0	multi-exon	FALSE	canonical	2	188	junction_9	35.796102396009	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCATCTTTCTTCCCTT	35586787	False	NA	NA	False	NA	NA	NA	35586898	35657791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_35587429_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598
transcript_85015.known	chr17	+	2285	15	FSM	ENSG00000006125.18	ENST00000614600.4	2285	15	0	0	0	0	multi-exon	FALSE	canonical	2	49	junction_1	78.2089039244332	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGCCATCTGTTTTTT	35580366	True	NA	NA	False	NA	NA	NA	35587366	35670898	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_35587598_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598_35657792_35670856
transcript_85017.known	chr17	-	1604	3	FSM	ENSG00000108733.11	ENST00000586663.2	1604	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	3	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTGAAAGGGAATCATGT	-35577960	True	NA	NA	False	ATTAAA	-15	NA	35578552	35575788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_35576182_35577037_35577592_35577895
transcript_85018.known	chr17	+	1298	2	FSM	ENSG00000267321.4	ENST00000592381.1	1298	2	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_1	0	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAGTCTGAATGAAAAATT	35565177	True	NA	NA	False	TATAAA	-20	NA	35568119	35574792	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_35568502_35573876
transcript_85020.known	chr17	+	2140	16	FSM	ENSG00000270647.7	ENST00000604841.5	2140	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	19.2208220427743	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTACATACTAGTGCA	35791492	True	NA	36	True	AATAAA	-20	NA	35809488	35847234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_35809577_35817715_35817756_35820023_35820076_35820163_35820240_35820331_35820438_35822639_35822834_35824077_35824199_35833906_35833942_35834565_35834599_35836131_35836242_35838423_35838554_35842366_35842460_35844076_35844159_35844279_35844369_35844476_35845039_35846905
transcript_85025.known	chr17	+	808	10	ISM	ENSG00000270647.7	ENST00000604841.5	2140	16	-8	11048	-1	2245	5prime_fragment	FALSE	canonical	1	1	junction_4	5.94626140455985	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTGTGTCTACAGATCAAG	35791484	True	NA	NA	False	NA	NA	NA	35809480	35836186	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_35809577_35817715_35817756_35820023_35820076_35820163_35820240_35820331_35820438_35822639_35822834_35824077_35824199_35833906_35833942_35834565_35834599_35836131
transcript_85029.known	chr17	+	760	7	FSM	ENSG00000270647.7	ENST00000605197.3	2388	7	0	1628	0	627	multi-exon	FALSE	canonical	3	15	junction_1	2.51661147842358	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTAGTTAAGAGACTTTA	35791509	True	NA	NA	False	NA	NA	NA	35809505	35824289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_35809577_35817715_35817756_35820023_35820076_35820163_35820249_35820331_35820438_35822639_35822834_35824077
transcript_8503.known	chr1	+	2173	8	FSM	ENSG00000132773.12	ENST00000495703.5	2173	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	37.1977616179758	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAAATATTTGACCAGCT	45339083	True	NA	18	True	NA	NA	NA	45340220	45343964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45340543_45341072_45341216_45341302_45341344_45341472_45341570_45341948_45342108_45342383_45342644_45342734_45343003_45343081
transcript_85038.known	chr17	+	3215	4	FSM	ENSG00000270885.2	ENST00000603017.2	3215	4	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	21.4165045389453	218	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGTGTTGGCTCCATTC	35729771	True	NA	19	True	ATTAAA	-31	NA	35731638	35743521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_35731879_35735037_35735401_35740408_35740534_35741034
transcript_85040.known	chr17	+	1041	3	FSM	ENSG00000270806.2	ENST00000605587.2	1041	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTTGAGGTGGCGCAGG	NA	False	NA	NA	False	AATAAA	-20	NA	35760886	35765079	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_35760955_35764006_35764326_35764425
transcript_85041.known	chr17	-	1163	7	FSM	ENSG00000278023.7	ENST00000620284.5	1163	7	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	13.5451918488526	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATGGTAAATAACGGACG	-35930414	True	NA	-17	True	AATAAA	-16	NA	35930773	35918079	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_35918444_35920186_35920273_35922576_35922676_35924603_35924773_35925514_35925638_35930075_35930256_35930631
transcript_85042.known	chr17	-	1032	6	FSM	ENSG00000278023.7	ENST00000616596.4	1032	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	16.004999218994	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGACGAGGCGGGGCCGCGG	-35930368	False	NA	-3	True	AATAAA	-30	NA	35930727	35918065	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_35918444_35920186_35920273_35924603_35924773_35925514_35925638_35930075_35930256_35930631
transcript_85044.known	chr17	-	779	5	FSM	ENSG00000278023.7	ENST00000613308.4	779	5	0	0	0	0	multi-exon	FALSE	canonical	2	33	junction_1	8.06225774829855	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTATAGTATGCTTTCATT	-35930381	True	NA	-4	True	AATAAA	-20	NA	35930740	35922477	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_35922676_35924603_35924773_35925514_35925638_35930075_35930256_35930631
transcript_85062.known	chr17	-	3931	26	FSM	ENSG00000278259.5	ENST00000614623.5	3931	26	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_14	30.0763295632961	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTGAATGTCAAGTTTT	-36529937	True	NA	-2	True	AGTAAA	-15	NA	36534868	36495635	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_36496407_36498265_36498560_36499074_36499161_36500829_36500960_36501068_36501236_36503096_36503201_36503949_36504021_36505296_36505405_36506455_36506609_36506962_36507140_36507398_36507513_36507802_36507925_36509061_36509136_36510745_36510918_36511364_36511456_36513428_36513506_36513628_36513726_36514445_36514549_36515112_36515183_36515857_36515991_36525227_36525342_36527550_36527700_36528063_36528203_36532526_36532682_36533952_36534105_36534760
transcript_85084.known	chr17	-	1640	11	FSM	ENSG00000278259.5	ENST00000621344.4	1640	11	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_8	18.0820352836731	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCTGCTCACTTAGTTT	-36529937	True	NA	-23	True	ATTAAA	-21	NA	36534868	36513085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_36513506_36513628_36513726_36514445_36514549_36515112_36515183_36515857_36515991_36525227_36525342_36527550_36527700_36528063_36528203_36532526_36532682_36533952_36534105_36534760
transcript_85086.known	chr17	+	881	5	FSM	ENSG00000273611.5	ENST00000620863.4	881	5	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	230.175476539096	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTCCTTTTTAAAGG	36482042	True	NA	79	True	AATAAA	-21	NA	36486699	36495822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_36486786_36486934_36486967_36492817_36492900_36493925_36494007_36495222
transcript_85088.known	chr17	+	834	5	FSM	ENSG00000273611.5	ENST00000620324.4	834	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	249.78090399388	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGGGTTAGGGATGGATC	36482037	True	NA	NA	False	NA	NA	NA	36486694	36498148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_36486786_36486934_36486967_36492812_36492900_36493925_36494007_36497605
transcript_85091.known	chr17	+	926	4	FSM	ENSG00000273611.5	ENST00000619730.4	926	4	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	252.248995152717	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTCCTTTTTAAAGGA	NA	False	NA	80	True	AATAAA	-22	NA	36486628	36495823	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_36486786_36492812_36492900_36493925_36494007_36495222
transcript_85093.known	chr17	+	1981	4	FSM	ENSG00000273611.5	ENST00000612728.4	1981	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	269.644622090303	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATACATAAGGCAAAATTGG	36482020	True	NA	NA	False	AATAAA	-26	NA	36486677	36499310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_36486786_36492812_36492900_36493925_36494007_36497605
transcript_85094.known	chr17	+	2264	2	FSM	ENSG00000277161.2	ENST00000620233.1	2264	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCAATACTTGTTTATTG	36535355	True	NA	39	True	TATAAA	-40	NA	36535554	36539310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_36535602_36537093
transcript_85095.known	chr17	+	876	2	FSM	ENSG00000277161.2	ENST00000619326.1	876	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTCACTGAAGAGGTTAA	36534438	True	NA	NA	False	NA	NA	NA	36535019	36537934	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_36535055_36537093
transcript_85096.known	chr17	+	2816	14	FSM	ENSG00000278311.5	ENST00000613102.5	2816	14	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	62.5453208462736	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGTACATGTTTCTAC	36544719	False	NA	NA	False	AATAAA	-28	NA	36544918	36589848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_36545098_36545618_36545818_36554819_36554901_36557082_36557337_36560772_36560872_36567662_36567777_36577982_36578187_36579244_36579420_36581343_36581539_36585299_36585451_36585839_36585966_36586049_36586199_36586996_36587246_36589207
transcript_851.nic	chr1	-	2956	12	NIC	ENSG00000221978.13	novel	2815	12	NA	NA	-11	0	intron_retention	FALSE	canonical	3	61	junction_6	330.739791856613	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTTAAAGCTATGTATGAA	-1399336	False	14990	-27	True	AATAAA	-15	NA	1399346	1386712	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_1387583_1387776_1387870_1387953_1388066_1390229_1390372_1390458_1390564_1390765_1391576_1392678_1392804_1393395_1393461_1395393_1395515_1398232_1398343_1398596_1398672_1399018
transcript_85100.nic	chr17	+	1901	12	ISM	ENSG00000278311.5	ENST00000613102.5	2816	14	-20	3695	-13	0	5prime_fragment	FALSE	canonical	3	84	junction_1	63.0310168957244	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAGAAGAAGAAAAG	36544699	False	NA	NA	False	NA	NA	NA	36544898	36586153	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_36545098_36545618_36545818_36554819_36554901_36557082_36557337_36560772_36560872_36567662_36567777_36577982_36578187_36579244_36579420_36581343_36581539_36585299_36585451_36585839_36585966_36586049
transcript_85102.nic	chr17	+	1779	11	ISM	ENSG00000278311.5	ENST00000613102.5	2816	14	623	3695	38	0	internal_fragment	FALSE	canonical	3	118	junction_6	45.0048886233485	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAGAAGAAGAAAAG	36545342	False	NA	NA	False	NA	NA	NA	36545541	36586153	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_36545818_36554819_36554901_36557082_36557337_36560772_36560872_36567662_36567777_36577982_36578187_36579244_36579420_36581343_36581539_36585299_36585451_36585839_36585966_36586049
transcript_85104.nic	chr17	+	1433	9	ISM	ENSG00000278311.5	ENST00000618837.4	2346	10	-33	4707	-13	-1026	5prime_fragment	FALSE	canonical	3	84	junction_1	68.9527691612164	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CGGAAGAATAGACGAAAAAA	36544699	False	NA	NA	False	AAGAAA	-15	NA	36544898	36581451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_36545098_36545618_36545818_36554819_36554901_36557082_36557337_36560772_36560872_36567662_36567777_36577982_36578187_36579244_36579420_36581343
transcript_85105.nic	chr17	+	1367	8	ISM	ENSG00000278311.5	ENST00000618837.4	2346	10	554	4707	-18	-1026	internal_fragment	FALSE	canonical	3	118	junction_6	50.6157997434938	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CGGAAGAATAGACGAAAAAA	36545286	False	NA	NA	False	AAGAAA	-15	NA	36545485	36581451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_36545818_36554819_36554901_36557082_36557337_36560772_36560872_36567662_36567777_36577982_36578187_36579244_36579420_36581343
transcript_85106.nic	chr17	+	779	5	ISM	ENSG00000278311.5	ENST00000617860.4	3497	8	-20	21659	-13	0	5prime_fragment	TRUE	canonical	3	84	junction_1	80.0640368704951	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAGATGTCAGTTGCA	36544699	False	NA	NA	False	AAAAAG	-8	NA	36544898	36560818	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_36545098_36545618_36545818_36554819_36554901_36557082_36557337_36560772
transcript_85107.known	chr17	+	695	4	FSM	ENSG00000278311.5	ENST00000616019.1	695	4	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_2	16.3095064303001	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAGATGTCAGTTGCA	36545304	False	NA	NA	False	AAAAAG	-8	NA	36545503	36560818	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_36545818_36554819_36554901_36557082_36557337_36560772
transcript_85108.known	chr17	+	2315	2	FSM	ENSG00000278311.5	ENST00000611219.1	2315	2	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAATATCTCAAAATAAC	36544712	False	NA	5	True	AATAAA	-17	NA	36544911	36547747	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_36545098_36545618
transcript_85115.known	chr17	+	1515	7	FSM	ENSG00000278535.5	ENST00000618403.5	1515	7	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_2	39.7324384686702	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTTGGCTTCAGGAGT	36591857	False	NA	17	True	ATTAAA	-20	NA	36591878	36600804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_36592157_36594970_36595181_36598162_36598258_36598920_36599051_36599670_36599764_36599971_36600038_36600161
transcript_85122.nic	chr17	+	1427	6	NIC	ENSG00000278535.5	novel	1515	7	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_4	144.556701677923	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTTGGCTTCAGGAGT	36591852	False	NA	17	True	ATTAAA	-20	NA	36591873	36600804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_36592157_36594970_36595181_36598162_36598258_36598920_36599051_36599971_36600038_36600161
transcript_85123.nic	chr17	+	2193	6	NIC	ENSG00000278535.5	novel	1515	7	NA	NA	-58	0	intron_retention	FALSE	canonical	3	307	junction_2	42.4075464982354	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTTGGCTTCAGGAGT	36591799	False	NA	17	True	ATTAAA	-20	NA	36591820	36600804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_36592157_36594970_36595181_36598162_36598258_36598920_36599764_36599971_36600038_36600161
transcript_85124.nnic	chr17	+	1320	6	NIC	ENSG00000278535.5	novel	1515	7	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	40	junction_1	142.13317698553	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTTGGCTTCAGGAGT	36591842	False	NA	17	True	ATTAAA	-20	NA	36591863	36600804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_36592157_36598162_36598258_36598920_36599051_36599670_36599764_36599971_36600038_36600161
transcript_85133.nic	chr17	+	2525	4	ISM	ENSG00000278535.5	ENST00000618403.5	1515	7	-58	0	-58	0	intron_retention	FALSE	canonical	3	307	junction_2	35.4902177445498	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTTGGCTTCAGGAGT	36591799	False	NA	17	True	ATTAAA	-20	NA	36591820	36600804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_36592157_36594970_36595181_36598162_36598258_36598920
transcript_85140.known	chr17	+	638	3	FSM	ENSG00000278535.5	ENST00000612205.1	638	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	176.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTATCTGAGTCTATTAG	36591893	False	NA	13	True	ATTAAA	-25	NA	36591914	36597013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_36592157_36594970_36595181_36596827
transcript_85141.nnic	chr17	+	2430	3	NIC	ENSG00000278535.5	novel	1515	7	NA	NA	-58	0	intron_retention	FALSE	canonical	2	7	junction_2	177	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTTGGCTTCAGGAGT	36591799	False	NA	17	True	ATTAAA	-20	NA	36591820	36600804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_36592157_36594970_36595181_36598920
transcript_85145.known	chr17	+	1839	5	FSM	ENSG00000278619.5	ENST00000614766.5	1839	5	0	0	0	0	multi-exon	FALSE	canonical	2	54	junction_1	16.6789538041209	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGGGAGATTCTGGCCAAT	36601560	False	NA	13	True	AATAAA	-14	NA	36601582	36608964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_36602353_36602552_36602647_36607669_36607803_36607898_36608019_36608242
transcript_85146.known	chr17	-	640	2	FSM	ENSG00000277268.2	ENST00000614277.1	640	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTATTCTCTTCTGCCT	-36936616	True	NA	NA	False	AATAAA	-20	NA	36936658	36906994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_36907540_36936563
transcript_85148.known	chr17	+	3425	5	FSM	ENSG00000273706.5	ENST00000614239.1	3425	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.82915619758885	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAATTGGTGTGTTATTTG	NA	False	NA	NA	False	AATAAA	-40	NA	36937474	36944612	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_36938368_36940289_36940517_36940609_36940888_36942199_36942366_36942751
transcript_85151.known	chr17	+	2007	12	FSM	ENSG00000275700.6	ENST00000679997.1	2007	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	159.364803190252	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCGCTTGTGATTTCTTA	NA	False	NA	30	True	AATAAA	-18	NA	36949007	37056871	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_36949217_36950213_36950406_36952885_36953297_36953769_36953908_36986616_36986732_36988518_36988721_36989246_36989412_36990773_36990858_37019004_37019073_37020933_37021015_37031613_37031690_37056605
transcript_85153.known	chr17	+	2018	11	FSM	ENSG00000275700.6	ENST00000680340.1	2018	11	0	0	0	0	multi-exon	FALSE	canonical	1	21	junction_10	158.11214374614	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACCGCTTGTGATTTCTT	NA	False	NA	29	True	AATAAA	-17	NA	36948924	37056870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_36949217_36950213_36950406_36952885_36953297_36953769_36953908_36986616_36986732_36988518_36988721_36989246_36989412_36990773_36990858_37019004_37019073_37020933_37021015_37056600
transcript_85154.known	chr17	+	1963	11	FSM	ENSG00000275700.6	ENST00000680579.1	1963	11	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_4	170.736785725865	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTACCGCCACCACCGC	NA	False	NA	17	True	AATAAA	-5	NA	36948924	37056858	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_36949217_36950213_36950406_36952885_36953297_36953769_36953908_36988518_36988721_36989246_36989412_36990773_36990858_37019004_37019073_37020933_37021015_37031613_37031686_37056600
transcript_85164.known	chr17	+	2076	12	FSM	ENSG00000275700.6	ENST00000680356.1	2076	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	164.538472980969	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACCGCCACCACCGCTT	NA	False	NA	19	True	AATAAA	-7	NA	36948924	37056860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_36949217_36950213_36950406_36952885_36953297_36953769_36953908_36986616_36986732_36988518_36988721_36989246_36989412_36990773_36990858_37019004_37019073_37020937_37021015_37031613_37031686_37056600
transcript_85165.known	chr17	+	2712	11	FSM	ENSG00000275700.6	ENST00000679881.1	2712	11	0	0	0	0	multi-exon	FALSE	canonical	3	480	junction_1	42.3839592298785	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACCGCCACCACCGCTT	NA	False	NA	19	True	AATAAA	-7	NA	36949289	37056860	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_36950406_36952885_36953297_36953769_36953908_36986616_36986732_36988518_36988721_36989246_36989412_36990773_36990858_37019004_37019073_37020933_37021015_37031613_37031686_37056600
transcript_85168.nic	chr17	-	782	4	NIC	ENSG00000278540.5	novel	451	4	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	76.9083148228388	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATTGTTCTGTCTTACT	-37351799	True	NA	0	True	AATAAA	-24	NA	37359138	37328644	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_37328987_37330172_37330426_37339803_37339851_37358998
transcript_8517.known	chr1	+	1887	8	FSM	ENSG00000132773.12	ENST00000372090.6	1887	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_6	14.1911153579287	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACCAGCTTCATCTTTG	45339032	True	NA	27	True	NA	NA	NA	45340169	45343973	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45340305_45341072_45341216_45341302_45341344_45341472_45341570_45341948_45342108_45342383_45342644_45342842_45343003_45343081
transcript_85171.nic	chr17	+	2326	17	NIC	ENSG00000276234.5	novel	2211	17	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	20.8924889314318	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGGTGTGTCAAATAT	37404869	True	NA	16	True	ATTAAA	-17	NA	37406877	37478267	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_37406950_37411268_37411391_37423508_37423616_37426949_37427010_37437737_37437830_37440504_37440663_37442563_37442653_37444695_37444769_37458523_37458588_37462077_37462122_37465430_37465542_37467453_37467526_37470399_37470533_37471093_37471138_37474555_37474630_37476796_37477566_37478025
transcript_85174.known	chr17	+	4236	16	FSM	ENSG00000276234.5	ENST00000615182.5	4236	16	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	11.5123122496453	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAATGACTCTTCTCTGTG	37404877	True	NA	2	True	AATAAA	-18	NA	37406885	37479725	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_37406950_37411268_37411391_37423508_37423616_37426949_37427010_37437737_37437830_37440504_37440663_37442563_37442653_37444695_37444769_37458523_37458588_37462077_37462122_37465430_37465542_37467453_37467526_37470399_37470533_37471093_37471138_37474555_37474630_37476796
transcript_8518.known	chr1	-	1526	6	FSM	ENSG00000280670.3	ENST00000626657.2	1526	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	4.45421149026402	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTACTAAAGCAATCCTC	-45499854	True	NA	NA	False	NA	NA	NA	45499974	45494391	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45495167_45495417_45495474_45496555_45496624_45497298_45497384_45499344_45499444_45499531
transcript_85185.nic	chr17	+	837	9	ISM	ENSG00000276234.5	ENST00000620367.4	1043	11	-61	7066	-8	-6884	5prime_fragment	FALSE	canonical	3	41	junction_1	12.2212673238089	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTATAAAAAACCATCC	37404869	True	NA	NA	False	NA	NA	NA	37406877	37458587	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_37406950_37411268_37411391_37423508_37423616_37426949_37427010_37437737_37437830_37440504_37440663_37442563_37442653_37444695_37444769_37458523
transcript_8519.known	chr1	-	2229	6	FSM	ENSG00000280670.3	ENST00000626177.2	2229	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	4.83321838943783	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCCTGATCCTTTTCACT	NA	False	NA	60	True	ATTAAA	-18	NA	45500079	45493865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45495167_45495417_45495546_45496555_45496624_45497298_45497384_45499344_45499444_45499531
transcript_85195.known	chr17	+	2211	17	FSM	ENSG00000276234.5	ENST00000620628.4	2211	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_16	20.8924889314318	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGGTGTGTCAAATAT	37404881	True	NA	16	True	ATTAAA	-17	NA	37406889	37478267	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_37406950_37411268_37411391_37423508_37423616_37426949_37427010_37437737_37437830_37440504_37440663_37442563_37442653_37444695_37444769_37458523_37458588_37462077_37462122_37465430_37465542_37467453_37467526_37470399_37470533_37471093_37471138_37474555_37474630_37476796_37477491_37478053
transcript_85196.known	chr17	+	1474	3	FSM	ENSG00000276023.5	ENST00000617516.5	1474	3	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	47.5	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGAATTTTTACTAATAAT	37489840	True	NA	NA	False	AATAAA	-18	NA	37489890	37513498	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_37489959_37510676_37510765_37512180
transcript_85198.known	chr17	+	1559	3	FSM	ENSG00000276023.5	ENST00000613659.1	1559	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	153.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTAACATATTAGAATTT	37491413	False	NA	NA	False	AATAAA	-7	NA	37491463	37513487	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_37491628_37510676_37510765_37512180
transcript_85204.nic	chr17	-	4817	23	NIC	ENSG00000275066.5	novel	8141	22	NA	NA	-12	-5	combination_of_known_junctions	FALSE	canonical	3	21	junction_17	26.1554475782107	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAACTGATGTTCTGCTTT	-37604690	True	NA	NA	False	AATAAA	-16	NA	37609450	37518465	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_37519072_37520178_37520215_37520537_37520649_37535978_37536128_37538323_37538421_37539191_37539246_37540379_37540544_37541971_37542566_37553114_37554060_37561194_37561258_37561470_37561590_37568790_37568925_37570636_37570886_37571790_37571988_37576340_37576419_37577379_37577614_37579131_37579435_37584647_37584760_37585324_37585431_37586418_37586550_37596222_37596345_37600362_37600404_37609278
transcript_85212.known	chr17	-	8141	22	FSM	ENSG00000275066.5	ENST00000612223.5	8141	22	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_16	19.9836668000522	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGGCTACTAAGCCTTT	-37604658	True	NA	-14	True	AATACA	-13	NA	37609418	37514806	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_37519072_37520178_37520215_37520537_37520649_37535978_37536128_37538323_37538421_37539191_37539246_37540379_37540544_37541971_37542566_37553114_37554060_37561194_37561258_37561470_37561590_37568790_37568925_37570636_37570886_37571790_37571988_37576340_37576419_37577379_37577614_37584647_37584760_37585324_37585431_37586418_37586550_37596222_37596345_37600362_37600404_37609278
transcript_8522.known	chr1	-	2095	5	FSM	ENSG00000280670.3	ENST00000629482.3	2095	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	4.96865172858795	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCCTGATCCTTTTCACT	NA	False	NA	60	True	ATTAAA	-18	NA	45500073	45493865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45495167_45496555_45496624_45497298_45497384_45499344_45499444_45499531
transcript_85220.known	chr17	-	3787	21	FSM	ENSG00000275066.5	ENST00000619541.4	3787	21	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_15	28.5543341718906	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAGGGACCAATAAATAGA	-37604621	True	NA	NA	False	NA	NA	NA	37609381	37518886	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_37519072_37520178_37520215_37520537_37520649_37535978_37536128_37538323_37538421_37539191_37539246_37540379_37540544_37541971_37542566_37553114_37554060_37561194_37561258_37561470_37561590_37568790_37568925_37570636_37570886_37571790_37571988_37576340_37576419_37584647_37584760_37585324_37585431_37586418_37586550_37596222_37596342_37600362_37600404_37609278
transcript_85237.nic	chr17	-	491	5	ISM	ENSG00000275066.5	ENST00000619976.1	1375	10	-12	13573	-12	-64	5prime_fragment	FALSE	canonical	3	84	junction_3	15.7856738848869	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTCTTAGAAGAAGAAAGAAA	-37604690	True	NA	-4	True	NA	NA	NA	37609450	37585405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_37585431_37586418_37586550_37596222_37596345_37600362_37600404_37609278
transcript_85238.known	chr17	-	6383	15	FSM	ENSG00000278053.5	ENST00000617633.5	6383	15	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_12	43.3856108000083	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGACTCAGCCTACTCTT	-37637235	True	NA	-4	True	AATAAA	-35	NA	37643446	37609738	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_37614354_37618291_37618385_37619767_37619840_37620872_37620949_37621126_37621278_37621397_37621521_37624343_37624435_37625894_37626099_37626787_37626861_37628560_37628673_37630029_37630174_37632112_37632299_37633287_37633419_37642109_37642309_37643333
transcript_85247.nic	chr17	-	1693	13	ISM	ENSG00000278053.5	ENST00000617633.5	6383	15	-18	10029	-18	0	5prime_fragment	FALSE	canonical	3	336	junction_10	43.9926603726879	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAATCTTGAATTTACCT	-37637253	True	NA	0	True	CATAAA	-22	NA	37643464	37619767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_37619840_37620872_37620949_37621126_37621278_37621397_37621521_37624343_37624435_37625894_37626099_37626787_37626861_37628560_37628673_37630029_37630174_37632112_37632299_37633287_37633419_37642109_37642309_37643333
transcript_85249.nic	chr17	-	312	2	ISM	ENSG00000278053.5	ENST00000613633.1	776	6	-31	15302	-18	-11319	5prime_fragment	FALSE	canonical	3	471	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGACGATGACTTCAGGT	-37637253	True	NA	15	True	AAGAAA	-5	NA	37643464	37642127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_37642309_37643333
transcript_85266.known	chr17	-	1643	12	FSM	ENSG00000274487.3	ENST00000649858.2	1815	12	172	0	2	0	multi-exon	FALSE	canonical	2	8	junction_9	108.205574167839	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCAGAATCTGAAACTTTT	NA	False	NA	NA	False	NA	NA	NA	38257192	38195702	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_38195941_38196366_38196472_38197545_38197711_38201104_38201220_38202071_38202106_38202237_38202335_38202780_38202982_38205634_38205743_38208994_38209117_38219045_38219124_38242200_38242286_38256897
transcript_85272.known	chr17	+	1553	8	FSM	ENSG00000278845.5	ENST00000613675.5	1553	8	0	0	0	0	multi-exon	FALSE	canonical	3	722	junction_4	38.1115441292841	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTAGCCTTTGATTGTG	38297141	True	NA	12	True	TATAAA	-18	NA	38297167	38323211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_38297250_38298448_38298627_38299350_38299469_38306532_38306632_38318686_38318736_38320617_38320768_38322125_38322300_38322508
transcript_85274.known	chr17	+	1554	7	FSM	ENSG00000278845.5	ENST00000619548.1	1554	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	286.545371625507	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTGATTGTGTTCTTA	NA	False	NA	18	True	TATAAA	-24	NA	38297022	38323217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_38297250_38298448_38298627_38299350_38299469_38306532_38306632_38318686_38318736_38322125_38322300_38322508
transcript_85277.known	chr17	+	7978	10	FSM	ENSG00000274211.6	ENST00000665913.1	7978	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	9.67368838207952	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATGTTCTTTGGTTTGG	NA	False	NA	14	True	AATAAA	-16	NA	38352123	38405593	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_38353033_38361710_38361776_38364751_38364857_38365307_38365410_38366286_38366418_38367881_38368051_38377713_38377843_38395308_38395445_38395847_38395999_38399512
transcript_85278.known	chr17	+	1827	9	FSM	ENSG00000274211.6	ENST00000613678.5	1827	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	5.15842757049084	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCACATGACCGTACTCT	NA	False	NA	NA	False	GGGGCT	-6	NA	38352227	38399648	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_38353033_38361710_38361776_38364751_38364857_38366286_38366418_38367881_38368051_38377713_38377843_38395308_38395445_38395847_38395999_38399512
transcript_8528.known	chr1	-	1234	6	FSM	ENSG00000117450.15	ENST00000262746.5	1234	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2914.58042263376	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAGGAAGCATATTATT	-45293173	True	NA	-14	True	ATTAAA	-28	NA	45521938	45511035	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45511415_45514506_45514638_45514872_45514996_45515653_45515808_45518937_45519055_45521608
transcript_85283.known	chr17	-	702	4	FSM	ENSG00000276170.5	ENST00000617990.5	734	4	32	0	32	0	multi-exon	FALSE	canonical	3	38	junction_2	13.8162545173751	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGGCTCAAAGAGAACAA	-38451946	True	NA	NA	False	AATAAA	-33	NA	38452399	38450393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_38450724_38451305_38451394_38451625_38451828_38452317
transcript_85284.nic	chr17	-	911	3	ISM	ENSG00000276170.5	ENST00000617990.5	734	4	313	0	-172	0	3prime_fragment	FALSE	canonical	3	38	junction_2	16.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGGCTCAAAGAGAACAA	-38451665	False	NA	NA	False	AATAAA	-33	NA	38452118	38450393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_38450724_38451305_38451394_38451625
transcript_85285.nic	chr17	-	1024	3	FSM	ENSG00000276170.5	ENST00000692656.1	850	3	-174	0	-153	0	multi-exon	FALSE	canonical	3	46	junction_2	12.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGGCTCAAAGAGAACAA	-38451646	False	NA	NA	False	AATAAA	-33	NA	38452099	38450393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_38450724_38451305_38451526_38451625
transcript_85286.nic	chr17	-	647	3	FSM	ENSG00000276170.5	ENST00000688817.1	654	3	7	0	-1	0	multi-exon	FALSE	canonical	3	37	junction_1	5.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGGCTCAAAGAGAACAA	-38451979	True	NA	NA	False	AATAAA	-33	NA	38452432	38450393	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_38450724_38451625_38451828_38452317
transcript_85288.known	chr17	-	419	2	FSM	ENSG00000276170.5	ENST00000622796.1	419	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGCCCGAGGAACATGG	-38451493	False	NA	-65	True	NA	NA	NA	38451946	38450625	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_38450724_38451625
transcript_85289.known	chr17	-	401	2	FSM	ENSG00000276170.5	ENST00000615582.1	401	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAGCTGAGATTCTATTCC	-38451235	False	NA	NA	False	NA	NA	NA	38451688	38451055	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_38451394_38451625
transcript_85290.known	chr17	-	3255	1	FSM	ENSG00000273604.2	ENST00000621654.2	3255	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCCTTTCATTTTTCT	NA	False	NA	0	True	CATAAA	-21	NA	38674957	38671702	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_38671700_38675000
transcript_85294.known	chr17	-	1534	11	FSM	ENSG00000277258.5	ENST00000616129.4	1534	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	50.0880225203591	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATGGACCAACCAGATT	NA	False	NA	-25	True	AATATA	-43	NA	38748378	38735043	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_38735601_38736089_38736171_38738352_38738449_38738540_38738596_38738748_38738862_38739067_38739119_38739197_38739254_38739585_38739683_38740290_38740443_38747878_38747972_38748195
transcript_8530.known	chr1	-	1107	6	FSM	ENSG00000117450.15	ENST00000447184.6	1107	6	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_5	2737.19976618441	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGGAATGGAACTGAATGA	-45293173	True	NA	NA	False	NA	NA	NA	45521938	45510913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45511415_45514506_45514638_45514872_45514996_45515653_45515808_45518937_45519055_45521857
transcript_85303.known	chr17	-	1499	10	FSM	ENSG00000277258.5	ENST00000618941.4	1499	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	45.6897751751478	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCGGGTTTTATAAATAAAT	-38748173	False	NA	-35	True	NA	NA	NA	38748184	38735108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_38735601_38736089_38736171_38738352_38738449_38738540_38738596_38738748_38738862_38739067_38739119_38739197_38739254_38739585_38739683_38740290_38740443_38747878
transcript_85304.nnic	chr17	-	2603	10	NIC	ENSG00000277258.5	novel	2634	11	NA	NA	-20	0	intron_retention	FALSE	canonical	0	0	junction_4	48.2907858705985	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCCTGTAGTTCTTTGG	NA	False	NA	-4	True	AATAAA	-15	NA	38748398	38733897	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_38735601_38736089_38736171_38738352_38738449_38738540_38738596_38738752_38738862_38739067_38739119_38739197_38739254_38739585_38739683_38740290_38740443_38748195
transcript_85306.known	chr17	-	2179	10	FSM	ENSG00000277258.5	ENST00000611883.4	2179	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	49.418844808658	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCCAATTGCCCCTCCAC	-38746617	False	NA	NA	False	NA	NA	NA	38746628	38734279	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_38735601_38736089_38736171_38738352_38738449_38738540_38738596_38738752_38738862_38739067_38739119_38739197_38739254_38739585_38739683_38740290_38740443_38746467
transcript_85309.nnic	chr17	-	1395	10	NIC	ENSG00000277258.5	novel	2634	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	48.2907858705985	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATGGACCAACCAGATT	NA	False	NA	-25	True	AATATA	-43	NA	38748336	38735043	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_38735601_38736089_38736171_38738352_38738449_38738540_38738596_38738752_38738862_38739067_38739119_38739197_38739254_38739585_38739683_38740290_38740443_38748195
transcript_8531.known	chr1	-	1296	6	FSM	ENSG00000117450.15	ENST00000424390.2	1296	6	0	0	0	0	multi-exon	FALSE	canonical	3	601	junction_5	2674.48429421449	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGGAATGGAACTGAATGA	-45523012	False	NA	NA	False	NA	NA	NA	45523047	45510913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45511415_45514506_45514638_45514872_45514996_45515653_45515808_45518937_45519055_45522777
transcript_85313.known	chr17	+	2552	4	FSM	ENSG00000277972.2	ENST00000613478.2	2552	4	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_1	40.3429740544194	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGAGTGGGGAGGAGAGA	38728071	True	NA	NA	False	NA	NA	NA	38730340	38735605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_38730407_38730759_38730796_38731319_38731440_38733275
transcript_85318.known	chr17	+	762	6	FSM	ENSG00000277791.5	ENST00000619426.5	762	6	0	0	0	0	multi-exon	FALSE	canonical	3	2579	junction_5	148.776879924268	1958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCTTTTGTCTTTGAT	38724830	True	NA	27	True	AATAAA	-16	NA	38752740	38764225	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_38752830_38753149_38753335_38755882_38755991_38760430_38760609_38762410_38762506_38764118
transcript_85319.known	chr17	+	662	6	FSM	ENSG00000277791.5	ENST00000613870.4	662	6	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	1140.99791410852	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCTTTTGTCTTTGAT	38724853	True	NA	27	True	AATAAA	-16	NA	38752763	38764225	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_38752830_38753149_38753335_38755882_38755991_38760507_38760609_38762410_38762506_38764118
transcript_85323.known	chr17	+	552	5	FSM	ENSG00000277791.5	ENST00000620309.4	552	5	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_3	1167.35373816166	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCTTTTGTCTTTGAT	38724862	True	NA	27	True	AATAAA	-16	NA	38752772	38764225	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_38752830_38753149_38753335_38755882_38755991_38762410_38762506_38764118
transcript_85328.known	chr17	-	5383	10	FSM	ENSG00000276293.5	ENST00000619039.5	5383	10	0	0	0	0	multi-exon	TRUE	canonical	3	84	junction_2	13.7517675631575	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTTATGTGTGAGTCC	NA	False	NA	-8	True	AATAAA	-20	NA	38799556	38765690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_38769772_38770435_38770540_38771013_38771273_38777686_38777801_38778333_38778373_38779382_38779530_38780451_38780605_38784242_38784340_38786822_38786921_38799265
transcript_85331.nnic	chr17	-	5306	9	NIC	ENSG00000276293.5	novel	5383	10	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_7	35.943532102452	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTTATGTGTGAGTCC	NA	False	NA	-8	True	AATAAA	-20	NA	38799576	38765690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_38769772_38770435_38770540_38771013_38771273_38777686_38777801_38778333_38778373_38779382_38779530_38780451_38780605_38786822_38786921_38799265
transcript_85336.known	chr17	-	1894	11	FSM	ENSG00000273559.5	ENST00000619299.4	1894	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_9	47.8465254746883	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTCTCTGGTGTCACCCA	-38824913	True	NA	NA	False	NA	NA	NA	38825315	38801724	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_38802207_38802699_38802862_38806296_38806396_38806764_38806977_38809701_38809766_38810467_38810596_38812794_38812865_38814860_38815098_38815624_38815742_38820900_38821074_38825165
transcript_85341.known	chr17	-	3067	10	FSM	ENSG00000273559.5	ENST00000614790.5	3067	10	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_5	23.4841685575518	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCGACCACCTGTGGAGTA	-38824919	True	NA	-8	True	AATAAA	-30	NA	38825321	38800440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_38802207_38802699_38802862_38806296_38806396_38806764_38806977_38809701_38809766_38810467_38810596_38812794_38812865_38814860_38815098_38820900_38821074_38825165
transcript_85346.nic	chr17	-	2258	10	NIC	ENSG00000273559.5	novel	3067	10	NA	NA	5	254	intron_retention	FALSE	canonical	3	45	junction_5	27.8505712865581	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTGTTTGGTCAATGAC	-38824948	False	NA	-2	True	AAAAAG	-17	NA	38825350	38801470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_38802207_38802699_38802862_38806296_38806396_38806764_38806977_38809701_38809766_38810275_38810596_38812794_38812865_38814860_38815098_38820900_38821074_38825165
transcript_85351.known	chr17	-	976	6	FSM	ENSG00000273559.5	ENST00000622665.1	976	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	56.2046261441174	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGATGAACACTTGAACAT	-38824904	True	NA	NA	False	NA	NA	NA	38825306	38810353	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_38810596_38812794_38812861_38814860_38815098_38815624_38815742_38820900_38821074_38825165
transcript_85352.nic	chr17	-	703	5	ISM	ENSG00000273559.5	ENST00000614790.5	3067	10	-29	10117	5	-204	5prime_fragment	FALSE	canonical	3	101	junction_3	10.5593560409714	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGGAGAAGAAAAAGAAGC	-38824948	False	NA	14	True	AAAAAG	-15	NA	38825350	38810557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_38810596_38812794_38812865_38814860_38815098_38820900_38821074_38825165
transcript_85354.nic	chr17	-	665	4	ISM	ENSG00000273559.5	ENST00000614790.5	3067	10	-29	12354	5	-2441	5prime_fragment	FALSE	canonical	3	101	junction_2	12.1197726417986	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTAGTATACCAGATAA	-38824948	False	NA	NA	False	ATTAAA	-35	NA	38825350	38812794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_38812865_38814860_38815098_38820900_38821074_38825165
transcript_85357.known	chr17	-	625	6	FSM	ENSG00000125691.14	ENST00000394332.5	625	6	0	0	0	0	multi-exon	FALSE	canonical	2	281	junction_1	3412.1314511607	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCACTAAATGTTTTCCTT	-38794229	True	NA	NA	False	ATTAAA	-17	NA	38853722	38847864	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_38848040_38850116_38850215_38850361_38850476_38852603_38852733_38853021_38853106_38853697
transcript_85359.known	chr17	-	588	5	FSM	ENSG00000125691.14	ENST00000245857.9	588	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	3917.6953285701	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTGTTTGCAGTGCTTG	-38793935	False	NA	-16	True	AATAAA	-25	NA	38853428	38850080	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_38850215_38850361_38850476_38852603_38852733_38853021_38853106_38853301
transcript_85362.known	chr17	-	2706	5	FSM	ENSG00000125691.14	ENST00000479035.7	2706	5	0	0	0	0	multi-exon	FALSE	canonical	3	6387	junction_4	1166.50618836764	1440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAATGTTTTCCTTTGTCA	-38794228	True	NA	NA	False	ATTAAA	-22	NA	38853721	38847859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_38850215_38850361_38850476_38852603_38852733_38853021_38853106_38853697
transcript_85365.known	chr17	-	615	4	FSM	ENSG00000125691.14	ENST00000577407.5	615	4	0	0	0	0	multi-exon	FALSE	canonical	3	6387	junction_3	1297.36305207482	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAAAAAAAAACTA	-38794244	True	NA	6	True	NA	NA	NA	38853737	38850113	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_38850476_38852603_38852733_38853021_38853106_38853697
transcript_85367.known	chr17	-	3081	1	FSM	ENSG00000125691.14	ENST00000577760.1	3081	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATCTGG	-38794271	True	NA	NA	False	NA	NA	NA	38853764	38850683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_38850700_38853800
transcript_85374.known	chr17	+	3910	7	FSM	ENSG00000002834.18	ENST00000318008.11	3910	7	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_6	23.6008474424119	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTTTCCTCTCTGGCTC	38863635	True	NA	33	True	AATAAA	-22	NA	38870057	38921770	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_38870259_38878085_38878181_38890419_38890505_38898411_38898520_38914324_38914476_38915042_38915147_38918604
transcript_85375.known	chr17	+	3492	8	FSM	ENSG00000002834.18	ENST00000435347.7	3492	8	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	172.503771032427	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCGGACTTGGTTTCCT	38863720	False	NA	24	True	AATAAA	-13	NA	38870142	38921761	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_38870259_38878085_38878181_38890419_38890505_38898411_38898520_38914324_38914476_38915042_38915147_38918604_38919983_38920306
transcript_85376.known	chr17	+	3692	2	FSM	ENSG00000263874.2	ENST00000583195.2	3692	2	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCTGAAGAATTATAAATTA	38925154	False	NA	NA	False	AATAAA	-22	NA	38925167	38929384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_38925892_38926416
transcript_85377.known	chr17	+	2698	4	FSM	ENSG00000214553.11	ENST00000647826.2	2714	4	0	16	0	-6	multi-exon	FALSE	canonical	0	0	junction_1	19.3275853524323	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTCACTCTGCAAAGAAT	39033098	False	NA	-1	True	AATAAA	-31	NA	39033108	39053199	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39033446_39034169_39034242_39044387_39046342_39052864
transcript_85380.known	chr17	-	6230	14	FSM	ENSG00000161381.14	ENST00000315392.9	6230	14	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_3	3.09991410455537	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTGTCACATTTCTGGA	-39151571	False	66	NA	False	AATAAA	-13	NA	39151637	39063312	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39067960_39069855_39070017_39072449_39072486_39077912_39078049_39079103_39079165_39083458_39083541_39087606_39087703_39105853_39105954_39107406_39107526_39108122_39108246_39108903_39108974_39109247_39109392_39139653_39139833_39151361
transcript_85382.known	chr17	-	2659	14	FSM	ENSG00000161381.14	ENST00000394318.7	2659	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	3.38286668112247	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTGTCTCTCAACGTAT	-39151453	False	NA	-1	True	AATAAA	-20	NA	39151519	39067129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39067960_39069855_39070017_39072449_39072486_39077912_39078049_39079103_39079529_39083458_39083541_39087606_39087703_39105853_39105954_39107406_39107526_39108122_39108246_39108903_39108974_39109247_39109392_39139653_39139833_39151361
transcript_85388.known	chr17	+	2777	1	FSM	ENSG00000280177.1	ENST00000623613.1	2777	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGCCTGATTAAAAAAAAT	39165047	True	NA	NA	False	NA	NA	NA	39165072	39167849	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39165100_39167800
transcript_85390.nnic	chr17	-	3226	14	NNC	ENSG00000067191.16	novel	3722	13	NA	NA	-22	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	15.5175030017166	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGCCTCCCAAGCCTGC	-39197674	False	NA	-12	True	TATAAA	-20	NA	39197725	39173800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_39174145_39174317_39175658_39177349_39177536_39177983_39178080_39183712_39183865_39184030_39184141_39184324_39184384_39184783_39184865_39186495_39186573_39186792_39186930_39187478_39187602_39191473_39191594_39194883_39194971_39197411
transcript_85393.known	chr17	-	3711	14	FSM	ENSG00000067191.16	ENST00000394303.8	3711	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	16.6853938180645	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTGGCATCACTGTGCC	-39195971	True	NA	NA	False	AATACA	-18	NA	39197669	39173452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39175658_39177349_39177536_39177983_39178080_39183712_39183865_39184030_39184141_39184324_39184384_39184783_39184865_39185130_39185151_39186495_39186573_39186792_39186930_39187478_39187602_39191473_39191594_39194883_39194971_39197411
transcript_85401.known	chr17	-	3722	13	FSM	ENSG00000067191.16	ENST00000622445.4	3722	13	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_7	9.992705672973	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTTGTGGCATCACTGT	-39196005	True	NA	NA	False	AATACA	-15	NA	39197703	39173455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39175658_39177349_39177536_39177983_39178080_39183712_39183865_39184030_39184141_39184324_39184384_39184783_39184865_39186495_39186573_39186792_39186930_39187478_39187602_39191473_39191594_39194883_39194971_39197411
transcript_85402.known	chr17	-	1753	13	FSM	ENSG00000067191.16	ENST00000394310.7	1753	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	17.2183687445188	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTGGTGTCTGTGGTTT	-39196004	True	NA	NA	False	NA	NA	NA	39197702	39177135	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39177536_39177983_39178080_39183712_39183865_39184030_39184141_39184324_39184384_39184783_39184865_39185130_39185151_39186495_39186573_39186792_39186930_39187478_39187602_39191473_39191594_39194883_39194971_39197411
transcript_85404.known	chr17	-	1889	13	FSM	ENSG00000067191.16	ENST00000344140.5	1889	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	17.3979165419311	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTGGTGTCTGTGGTTT	-39196005	True	NA	NA	False	NA	NA	NA	39197703	39177135	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39177536_39177983_39178080_39183712_39183865_39184030_39184141_39184324_39184384_39184783_39184865_39185949_39186105_39186495_39186573_39186792_39186930_39187478_39187602_39191473_39191594_39194883_39194971_39197411
transcript_8541.known	chr1	+	5049	4	FSM	ENSG00000132763.15	ENST00000401061.9	5049	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	3.09120616516523	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCCAAGCTTTTCCATTA	45498377	True	NA	NA	False	AATAAA	-17	NA	45500299	45513382	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45500414_45507355_45507551_45508211_45508365_45508795
transcript_85410.known	chr17	+	812	6	FSM	ENSG00000108298.12	ENST00000678012.1	812	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	5780.97772353432	7073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCGCAAACTCCACCTCCA	39051151	True	NA	144	True	NA	NA	NA	39200316	39204840	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39200350_39201212_39201320_39202316_39202446_39202993_39203110_39204076_39204188_39204524
transcript_85412.known	chr17	+	1051	6	FSM	ENSG00000108298.12	ENST00000579260.5	1051	6	0	0	0	0	multi-exon	FALSE	canonical	3	1265	junction_1	5674.85391530037	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGCCTTAATCTGCCTTC	39051176	True	NA	15	True	AATAAA	-1	NA	39200341	39204711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39200744_39201212_39201320_39202316_39202440_39202988_39203110_39204076_39204188_39204524
transcript_85414.known	chr17	+	792	6	FSM	ENSG00000108298.12	ENST00000582193.5	792	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	6160.2156001231	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGCCTTCCTCTCTGCT	39051179	True	NA	24	True	AATAAA	-10	NA	39200344	39204720	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39200479_39201212_39201320_39202316_39202440_39202988_39203110_39204076_39204188_39204524
transcript_85415.known	chr17	+	1247	5	FSM	ENSG00000108298.12	ENST00000577741.2	1247	5	0	0	0	0	multi-exon	FALSE	canonical	3	10414	junction_1	2025.40100967685	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCTCTGCTTCTTGCA	39051151	True	NA	31	True	AATAAA	-17	NA	39200316	39204727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39200350_39201212_39201320_39202316_39203110_39204076_39204188_39204524
transcript_85416.known	chr17	-	3430	11	FSM	ENSG00000141750.7	ENST00000333461.6	3430	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.36014705087354	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCATCTGCTCTGTGTCTC	-39225774	True	NA	-4	True	ATTAAA	-15	NA	39225945	39210540	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39212397_39212994_39213133_39213506_39213559_39214232_39214331_39214790_39214862_39214950_39215024_39215117_39215231_39216809_39216901_39217075_39217174_39217866_39218174_39225412
transcript_8542.known	chr1	-	945	6	FSM	ENSG00000117450.15	ENST00000319248.13	945	6	0	0	0	0	multi-exon	FALSE	canonical	3	6804	junction_5	235.885056754344	6108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGATGAGTCTTTATTTT	-45293119	True	NA	-29	True	ATTAAA	-13	NA	45521884	45511050	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45511415_45514506_45514638_45514872_45514996_45515653_45515808_45518937_45519055_45521828
transcript_85420.known	chr17	-	10332	15	FSM	ENSG00000108306.13	ENST00000264658.11	10332	15	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_14	4.49773185469462	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTTCATTTTCCTGTGG	-39400699	True	NA	-24	True	ATTAAA	-17	NA	39401626	39252662	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39261568_39264174_39264388_39265396_39265454_39268826_39268872_39270795_39270857_39274969_39275101_39281388_39281464_39282728_39282856_39285477_39285574_39297126_39297196_39298989_39299085_39301000_39301076_39303584_39303640_39343179_39343242_39401360
transcript_85421.known	chr17	-	1620	15	FSM	ENSG00000108306.13	ENST00000577399.5	1620	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	7.38344811876192	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGAGGTGGTCAACCTT	-39402172	True	NA	NA	False	NA	NA	NA	39402523	39261459	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39261568_39264174_39264388_39265396_39265454_39268826_39268872_39270795_39270857_39274969_39275101_39281388_39281464_39282728_39282856_39285477_39285574_39297126_39297196_39298989_39299085_39301000_39301076_39303584_39303640_39343179_39343242_39402172
transcript_85424.known	chr17	-	2870	18	FSM	ENSG00000125686.12	ENST00000394287.7	2870	18	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_1	5.34744384817107	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCCTGTGTGTAATAAAA	-39445650	True	NA	-32	True	AATAAA	-20	NA	39451268	39404284	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39405309_39410580_39410722_39415025_39415132_39415243_39415340_39419716_39419919_39423326_39423446_39423696_39423822_39424626_39424739_39427700_39427791_39431114_39431189_39431941_39432017_39434248_39434321_39439164_39439194_39440385_39440519_39440622_39440678_39443549_39443629_39447797_39447905_39451037
transcript_85425.nnic	chr17	-	2777	18	NNC	ENSG00000125686.12	novel	2870	18	NA	NA	-6	-4	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	5.54066439497253	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTTGCCTGTGTGTAAT	-39445660	True	NA	-36	True	AATAAA	-16	NA	39451278	39404288	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_39405210_39410580_39410722_39415025_39415132_39415243_39415340_39419716_39419919_39423326_39423446_39423696_39423822_39424626_39424739_39427700_39427791_39431114_39431189_39431941_39432017_39434248_39434321_39439164_39439194_39440385_39440519_39440622_39440678_39443549_39443629_39447797_39447905_39451037
transcript_85429.known	chr17	-	8137	17	FSM	ENSG00000125686.12	ENST00000300651.11	8137	17	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	3.20156211871642	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCCTGTGTGTAATAAAA	-39445645	True	NA	-32	True	AATAAA	-20	NA	39451263	39404284	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39410722_39415025_39415132_39415243_39415340_39419716_39419919_39423326_39423446_39423696_39423822_39424626_39424739_39427700_39427791_39431114_39431189_39431941_39432017_39434248_39434321_39439164_39439194_39440385_39440519_39440622_39440678_39443549_39443629_39447797_39447905_39451037
transcript_8543.nic	chr1	+	1474	11	NIC	ENSG00000117448.14	novel	1818	10	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	320	junction_1	558.45676645556	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTGCTTGCTTGTCTTA	NA	False	NA	25	True	AATAAA	-15	NA	45550795	45570047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_45550877_45550965_45551156_45552435_45552564_45561788_45561879_45566568_45566689_45566868_45567021_45567981_45568178_45568484_45568685_45568926_45569000_45569142_45569230_45569890
transcript_85436.known	chr17	+	8287	14	FSM	ENSG00000167258.15	ENST00000447079.6	8287	14	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_13	17.1232911728942	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTTTGCTCCATTGCAT	39453637	True	NA	6	True	ATTAAA	-18	NA	39461485	39534544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39463118_39470878_39471764_39490556_39490734_39492750_39492891_39494523_39494695_39501249_39501440_39509704_39509762_39511528_39511631_39515730_39515809_39517439_39517557_39519955_39520088_39524673_39524886_39525863_39526317_39530603
transcript_85438.known	chr17	+	5918	14	FSM	ENSG00000167258.15	ENST00000430627.6	5918	14	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_13	19.7382277101085	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTCAAACAGAGCATTGT	39461749	False	NA	NA	False	AAAACA	-5	NA	39461760	39532477	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39463118_39470878_39471764_39490556_39490734_39492750_39492891_39494523_39494695_39501249_39501440_39509704_39509762_39511528_39511631_39515730_39515809_39517439_39517557_39519955_39520088_39524673_39524886_39525863_39526317_39530630
transcript_85445.known	chr17	+	1815	7	FSM	ENSG00000131771.14	ENST00000254079.9	1815	7	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	4.52462398683274	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGAGACTCCTCTTTCA	39626149	True	NA	14	True	AATAAA	-14	NA	39626951	39636624	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39627474_39629169_39629231_39629539_39629563_39629971_39630048_39633882_39634087_39635606_39635727_39635815
transcript_85446.known	chr17	+	1504	7	FSM	ENSG00000131771.14	ENST00000394267.2	1504	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	27.92499875659	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAGACTCCTCTTTCAGG	39628375	True	NA	16	True	AATAAA	-16	NA	39628497	39636626	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39628707_39629169_39629231_39629539_39629563_39629971_39630048_39633882_39634087_39635606_39635727_39635815
transcript_85448.known	chr17	+	1466	5	FSM	ENSG00000131771.14	ENST00000579000.5	1466	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	36.6674242345982	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTGAGACTCCTCTTT	39627165	False	NA	12	True	AATAAA	-12	NA	39627199	39636622	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39627474_39629169_39629231_39633882_39634087_39635606_39635727_39635815
transcript_85462.known	chr17	+	2770	15	FSM	ENSG00000131748.16	ENST00000336308.10	2770	15	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_1	22.2633816673323	964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGTGCTCAGTAATCAAT	39631951	True	NA	12	True	ATTAAA	-18	NA	39637143	39664201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39637232_39653480_39653751_39657007_39657086_39657774_39657853_39657972_39658027_39658404_39658523_39658721_39658821_39659050_39659107_39659460_39659554_39660210_39660274_39660430_39660527_39660809_39660890_39660980_39661086_39662250_39662345_39662803
transcript_85463.nic	chr17	+	2122	15	NIC	ENSG00000131748.16	novel	2770	15	NA	NA	8	0	combination_of_known_junctions	TRUE	canonical	2	9	junction_14	110.218081593739	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGCCCCTCCCACTGCC	39631905	True	NA	37	True	ATTAAA	-27	NA	39637097	39663484	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_39637232_39653480_39653751_39657007_39657086_39657774_39657853_39657972_39658027_39658404_39658523_39658721_39658821_39659050_39659107_39659460_39659554_39660210_39660274_39660430_39660527_39660809_39660890_39660980_39661086_39662250_39662368_39662803
transcript_85476.nic	chr17	+	2055	14	NIC	ENSG00000131748.16	novel	2770	15	NA	NA	-47	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_6	108.097534306185	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGCCCCTCCCACTGCC	39637030	False	NA	37	True	ATTAAA	-27	NA	39637042	39663484	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_39637232_39653480_39653751_39657007_39657086_39657774_39657853_39657972_39658027_39658404_39658523_39659050_39659107_39659460_39659554_39660210_39660274_39660430_39660527_39660809_39660890_39660980_39661086_39662250_39662345_39662803
transcript_8548.known	chr1	+	1360	10	FSM	ENSG00000117448.14	ENST00000621846.4	1360	10	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_1	409.810465073735	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGCTTGCTTGTCTTAT	NA	False	NA	26	True	AATAAA	-16	NA	45550782	45570048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45550877_45550965_45551156_45561788_45561879_45566568_45566689_45566868_45567021_45567981_45568178_45568484_45568685_45568926_45569000_45569142_45569230_45569890
transcript_85486.known	chr17	+	1949	14	FSM	ENSG00000131748.16	ENST00000394250.8	1949	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	113.782206572664	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTTTGTATTAAGCCAAT	39631951	True	NA	-13	True	NA	NA	NA	39637143	39663434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39637232_39653480_39653751_39657007_39657086_39657774_39657853_39658404_39658523_39658721_39658821_39659050_39659107_39659460_39659554_39660210_39660274_39660430_39660527_39660809_39660890_39660980_39661086_39662250_39662345_39662803
transcript_8550.known	chr1	+	1818	10	FSM	ENSG00000117448.14	ENST00000372070.7	1818	10	0	0	0	0	multi-exon	TRUE	canonical	3	343	junction_1	506.487687686263	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTTGCTTGTCTTATT	NA	False	NA	27	True	AATAAA	-17	NA	45550542	45570049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45551156_45552435_45552564_45561788_45561879_45566568_45566689_45566868_45567021_45567981_45568178_45568484_45568685_45568926_45569000_45569142_45569230_45569890
transcript_85512.known	chr17	+	1989	14	FSM	ENSG00000131748.16	ENST00000580611.5	1989	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	154.230519854009	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGCCCCTCCCACTGCC	39631960	True	NA	37	True	ATTAAA	-27	NA	39637152	39663484	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39637232_39653480_39653751_39657774_39657853_39657972_39658027_39658404_39658523_39658721_39658821_39659050_39659107_39659460_39659554_39660210_39660274_39660430_39660527_39660809_39660890_39660980_39661086_39662250_39662368_39662803
transcript_85513.known	chr17	+	960	2	FSM	ENSG00000173991.6	ENST00000309889.3	960	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCATCTCTTTCCTTGTG	39665335	False	NA	19	True	AATAAA	-20	NA	39665348	39666554	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39665470_39665715
transcript_85514.known	chr17	+	821	3	FSM	ENSG00000141744.4	ENST00000394246.1	821	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	7.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGCGGTCAGTGCTGTG	39667967	False	NA	3	True	AATAAA	-15	NA	39667980	39670473	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39668071_39669628_39669837_39669950
transcript_85515.known	chr17	+	958	3	FSM	ENSG00000141744.4	ENST00000269582.3	958	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	3.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGGTCAGTGCTGTGTG	39668418	False	NA	5	True	AATAAA	-17	NA	39668452	39670475	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39668678_39669628_39669837_39669950
transcript_85535.known	chr17	+	4557	27	FSM	ENSG00000141736.14	ENST00000269571.10	4557	27	0	0	0	0	multi-exon	FALSE	canonical	3	729	junction_5	89.3176384178645	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAGGCACCGGCCTATGTC	39682771	True	NA	25	True	AATATA	-13	NA	39700063	39728658	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39700312_39706989_39707142_39708320_39708535_39709317_39709453_39709812_39709882_39710085_39710202_39710339_39710482_39711927_39712048_39712321_39712449_39715285_39715360_39715445_39715537_39715739_39715940_39716300_39716434_39716514_39716606_39717319_39717481_39719786_39719835_39723318_39723458_39723537_39723661_39723911_39724011_39724725_39724912_39725048_39725205_39725326_39725403_39725706_39725854_39726561_39726660_39726814_39727004_39727294_39727548_39727688
transcript_85544.known	chr17	+	4523	27	FSM	ENSG00000141736.14	ENST00000578373.5	4523	27	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	179.295201360129	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGTTGTATGGGGAGGC	39682787	True	NA	16	True	AATAAA	-16	NA	39700079	39728577	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39700312_39706989_39707205_39708320_39708535_39709317_39709453_39709812_39709882_39710085_39710202_39710339_39710482_39711927_39712048_39712321_39712449_39715285_39715360_39715445_39715537_39715739_39715940_39716300_39716434_39716514_39716606_39717319_39717481_39719786_39719835_39723318_39723458_39723537_39723661_39723911_39724011_39724725_39724912_39725048_39725205_39725326_39725403_39725706_39725854_39726561_39726660_39726814_39727004_39727294_39727548_39727688
transcript_85578.known	chr17	+	3238	21	FSM	ENSG00000141736.14	ENST00000445658.6	3238	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	209.748963048688	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAGGGAGCAGGGAAGGC	39682683	True	NA	NA	False	NA	NA	NA	39699975	39728079	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39700312_39711927_39712048_39712321_39712449_39715285_39715360_39715445_39715537_39715739_39715940_39716300_39716434_39716514_39716606_39717319_39717481_39719786_39719835_39723318_39723458_39723537_39723661_39723911_39724011_39724725_39724912_39725048_39725205_39725326_39725403_39725706_39725854_39726561_39726660_39726814_39727004_39727294_39727548_39727688
transcript_8558.known	chr1	+	1407	9	FSM	ENSG00000117448.14	ENST00000351829.9	1407	9	0	0	0	0	multi-exon	FALSE	canonical	3	1066	junction_1	203.119692238345	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTTGCTTGTCTTATT	45538057	True	NA	27	True	AATAAA	-17	NA	45550825	45570049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45551156_45561788_45561879_45566568_45566689_45566868_45567021_45567981_45568178_45568484_45568685_45568926_45569000_45569142_45569230_45569890
transcript_85587.nic	chr17	+	2421	15	ISM	ENSG00000141736.14	ENST00000584450.5	3730	26	-133	10389	-85	0	5prime_fragment	TRUE	canonical	3	729	junction_5	37.3696373533162	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTCTATCCCCACTGTTA	39699819	False	NA	16	True	ATTAAA	-27	NA	39699890	39717655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_39700312_39706989_39707142_39708320_39708535_39709317_39709453_39709812_39709882_39710085_39710202_39710339_39710482_39711927_39712048_39712321_39712449_39715285_39715360_39715445_39715537_39715739_39715940_39716300_39716434_39716514_39716606_39717319
transcript_85598.known	chr17	-	2687	8	FSM	ENSG00000161395.14	ENST00000300658.9	2687	8	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	23.5415394915594	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCCTTGTTCAGCTCAT	-39686187	True	NA	-2	True	AATAAA	-17	NA	39688057	39671121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39672867_39673050_39673256_39673513_39673651_39673992_39674055_39674616_39674680_39684596_39684750_39685921_39686020_39687833
transcript_85608.known	chr17	-	2533	7	FSM	ENSG00000161395.14	ENST00000378011.8	2533	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	45.4120028186382	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCCCTTGTTCAGCTCA	-39686187	True	NA	-3	True	AATAAA	-16	NA	39688057	39671122	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39672867_39673050_39673256_39673513_39673651_39673992_39674055_39674616_39674680_39685921_39686020_39687833
transcript_85609.known	chr17	-	970	7	FSM	ENSG00000161395.14	ENST00000429199.6	970	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	48.396797414705	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGATCCTGCCCCCGCCCTG	-39686187	True	NA	NA	False	NA	NA	NA	39688057	39672775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39672867_39673050_39673256_39673513_39673651_39673992_39674055_39684596_39684750_39685921_39686020_39687833
transcript_85610.known	chr17	-	3028	7	FSM	ENSG00000161395.14	ENST00000309862.10	3028	7	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	22.5345413877353	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCCCTTGTTCAGCTCA	-39686187	True	NA	-3	True	AATAAA	-16	NA	39688057	39671122	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39672867_39673050_39673256_39673513_39674055_39674616_39674680_39684596_39684750_39685921_39686020_39687833
transcript_85630.known	chr17	-	2220	4	FSM	ENSG00000161395.14	ENST00000579146.5	2220	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	65.4488774201327	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCCTTGTTCAGCTCAT	-39686187	True	NA	-2	True	AATAAA	-17	NA	39688057	39671121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39672867_39684596_39684750_39685921_39686020_39687833
transcript_85632.known	chr17	-	1397	4	FSM	ENSG00000141741.12	ENST00000394231.8	1397	4	0	0	0	0	multi-exon	FALSE	canonical	3	754	junction_3	28.3117564901148	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTCTGTACAAAGCCTGG	-39723999	True	NA	NA	False	AGTAAA	-15	NA	39730532	39728509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39729606_39729684_39729762_39730193_39730292_39730406
transcript_85635.known	chr17	-	806	3	FSM	ENSG00000141741.12	ENST00000577810.1	806	3	0	0	0	0	multi-exon	FALSE	canonical	3	754	junction_2	33.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTAACTAGTGTGTGTT	-39723977	True	NA	-8	True	AGTAAA	-18	NA	39730510	39729157	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39729762_39730193_39730292_39730406
transcript_85637.known	chr17	-	825	3	FSM	ENSG00000141741.12	ENST00000469568.5	825	3	0	0	0	0	multi-exon	FALSE	canonical	3	772	junction_1	24.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAACTAGTGTGTGTTTT	-39723958	True	NA	-6	True	AGTAAA	-20	NA	39730491	39729155	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39729606_39729684_39729762_39730193
transcript_85645.known	chr17	+	2233	15	FSM	ENSG00000141738.14	ENST00000309156.9	2233	15	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	38.4567077029085	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGAGTTCTGTCTGGCA	39737324	True	NA	24	True	AATAAA	-18	NA	39737937	39747285	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39738134_39742251_39742457_39742565_39742717_39742897_39743055_39743179_39743302_39743392_39743471_39744069_39744208_39744552_39744664_39744885_39744985_39745242_39745324_39745421_39745539_39745727_39745789_39745912_39746001_39746108_39746203_39746750
transcript_85652.known	chr17	+	2093	15	FSM	ENSG00000141738.14	ENST00000394211.7	2093	15	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	23.8824715843983	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGAGTTCTGTCTGGCA	39736748	True	NA	24	True	AATAAA	-18	NA	39738336	39747285	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39738393_39742251_39742457_39742565_39742717_39742897_39743055_39743179_39743302_39743392_39743471_39744069_39744208_39744552_39744664_39744885_39744985_39745242_39745324_39745421_39745539_39745727_39745789_39745912_39746001_39746108_39746203_39746750
transcript_85661.nic	chr17	+	2185	14	NIC	ENSG00000141738.14	novel	2233	15	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	48.8988812930928	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGAGTTCTGTCTGGCA	39737881	False	NA	24	True	AATAAA	-18	NA	39737897	39747285	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_39738134_39742251_39742457_39742565_39742717_39742897_39743055_39743179_39743302_39743392_39743471_39744069_39744208_39744552_39744664_39744885_39744985_39745242_39745324_39745421_39745539_39745727_39745789_39746108_39746203_39746750
transcript_85668.nic	chr17	+	2057	14	NIC	ENSG00000141738.14	novel	2093	15	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_12	38.9223168061991	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGAGTTCTGTCTGGCA	39737671	False	NA	24	True	AATAAA	-18	NA	39738284	39747285	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_39738393_39742251_39742457_39742565_39742717_39742897_39743055_39743179_39743302_39743392_39743471_39744069_39744208_39744552_39744664_39744885_39744985_39745242_39745324_39745421_39745539_39745727_39745789_39746108_39746203_39746750
transcript_857.known	chr1	-	3112	11	FSM	ENSG00000221978.13	ENST00000400809.8	3112	11	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_6	241.646870453561	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATGTTCTCCTAATT	-1399325	False	14990	-1	True	CATAAA	-17	NA	1399335	1385710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1387583_1387776_1387870_1387953_1388066_1390229_1390372_1390458_1390564_1390765_1390866_1393395_1393461_1395393_1395515_1398232_1398343_1398596_1398672_1399018
transcript_85702.known	chr17	-	1427	9	FSM	ENSG00000073605.19	ENST00000394179.5	1427	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	11.6505096455048	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGTCTTTTGAAGCCT	-39917288	False	NA	-2	True	ATTAAA	-21	NA	39917316	39904596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39904965_39905425_39905497_39905846_39905986_39906110_39906272_39906960_39906988_39908957_39909043_39909755_39909925_39912325_39912498_39917081
transcript_85703.known	chr17	-	1127	8	FSM	ENSG00000073605.19	ENST00000523371.5	1127	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	12.9267954581298	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAAAAGCCCTTTCTCCC	-39917288	False	NA	NA	False	NA	NA	NA	39917316	39904811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39904965_39905425_39905497_39905846_39905986_39906110_39906272_39906960_39906988_39909755_39909925_39912325_39912498_39917081
transcript_85704.known	chr17	-	2106	4	FSM	ENSG00000172057.10	ENST00000579695.5	2106	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	19.3448241713959	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTGGCCTTCGCTT	-39920706	True	NA	-12	True	AATAAA	-22	NA	39927601	39921040	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39922686_39923111_39923264_39924029_39924221_39927483
transcript_85706.known	chr17	-	2109	4	FSM	ENSG00000172057.10	ENST00000304046.7	2109	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	9.46337971105226	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTGTCTGGCCTTCGC	-39920706	True	NA	-14	True	AATAAA	-20	NA	39927601	39921042	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_39922686_39923111_39923264_39924029_39924226_39927483
transcript_85714.known	chr17	+	2147	12	FSM	ENSG00000108344.15	ENST00000264639.9	2147	12	0	0	0	0	multi-exon	FALSE	canonical	3	958	junction_3	63.9788188090273	6702	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGCATCAGTTACTAT	39955868	True	NA	16	True	AATAAA	-16	NA	39980806	39997959	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_39981191_39984293_39984485_39986574_39986713_39988682_39988820_39989738_39989930_39990093_39990198_39994953_39995069_39995175_39995296_39995423_39995528_39996182_39996339_39997329_39997381_39997503
transcript_8572.nic	chr1	+	2396	8	NIC	ENSG00000117448.14	novel	1407	9	NA	NA	-8	0	intron_retention	FALSE	canonical	3	1066	junction_1	213.947256517649	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTGCTTGCTTGTCTTA	NA	False	NA	25	True	AATAAA	-15	NA	45550795	45570047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_45551156_45561788_45561879_45566568_45566689_45566868_45568178_45568484_45568685_45568926_45569000_45569142_45569230_45569890
transcript_85777.nic	chr17	-	3809	27	NIC	ENSG00000008838.21	novel	3480	26	NA	NA	84	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_20	68.5134742502973	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGACTGTGTGTGCTGT	-40054616	True	NA	-13	True	AATAAA	-17	NA	40054658	40019103	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_40019646_40019784_40019934_40020272_40020354_40021954_40022055_40022393_40022485_40022644_40022827_40023130_40023396_40026155_40026332_40026646_40026747_40026855_40027035_40027382_40027466_40027908_40027947_40028825_40028969_40029747_40029860_40031158_40031246_40031537_40031621_40032042_40032091_40032648_40032763_40033055_40033207_40033344_40033457_40034915_40034973_40035116_40035350_40035721_40035796_40036115_40036155_40053297_40053381_40053468_40053658_40054360
transcript_85782.known	chr17	-	3480	26	FSM	ENSG00000008838.21	ENST00000394128.7	3480	26	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_25	41.7057118390275	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGACTGTGTGTGCTGT	-40049941	True	NA	-13	True	AATAAA	-17	NA	40054408	40019103	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_40019646_40019784_40019934_40020272_40020354_40021954_40022055_40022393_40022485_40022644_40022827_40023130_40023396_40026155_40026332_40026646_40026747_40026855_40027035_40027382_40027466_40027908_40027947_40028825_40028969_40029747_40029860_40031158_40031246_40031537_40031621_40032042_40032091_40032648_40032763_40033055_40033207_40033344_40033457_40035116_40035350_40035721_40035796_40036115_40036155_40053297_40053381_40053468_40053636_40054360
transcript_85784.nic	chr17	-	3752	26	NIC	ENSG00000008838.21	novel	3480	26	NA	NA	84	0	combination_of_known_junctions	FALSE	canonical	3	118	junction_25	37.5809313349204	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGACTGTGTGTGCTGT	-40054616	True	NA	-13	True	AATAAA	-17	NA	40054658	40019103	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_40019646_40019784_40019934_40020272_40020354_40021954_40022055_40022393_40022485_40022644_40022827_40023130_40023396_40026155_40026332_40026646_40026747_40026855_40027035_40027382_40027466_40027908_40027947_40028825_40028969_40029747_40029860_40031158_40031246_40031537_40031621_40032042_40032091_40032648_40032763_40033055_40033207_40033344_40033457_40035116_40035350_40035721_40035796_40036115_40036155_40053297_40053381_40053468_40053658_40054360
transcript_85796.known	chr17	-	3446	25	FSM	ENSG00000008838.21	ENST00000356271.7	3446	25	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_22	64.8768063332344	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTGTGCTGTTGGTAT	-40049940	True	NA	-7	True	AATAAA	-23	NA	40054407	40019097	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_40019646_40019784_40019934_40020272_40020354_40021954_40022055_40022393_40022485_40022644_40022827_40023130_40023396_40026155_40026332_40026646_40026747_40026855_40027035_40027382_40027466_40027908_40027947_40028825_40028969_40029747_40029860_40031158_40031246_40031537_40031621_40032042_40032091_40032648_40032763_40033055_40033207_40033344_40033457_40035116_40035350_40035721_40035796_40053297_40053381_40053468_40053636_40054360
transcript_85808.known	chr17	+	2538	10	FSM	ENSG00000126351.13	ENST00000264637.8	2538	10	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_9	5.80123443653627	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGTCTGCCTCCTCCCCC	40062798	False	NA	17	True	CATAAA	-18	NA	40062809	40093867	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_40063093_40074191_40074542_40076870_40076939_40077507_40077609_40083834_40083983_40084609_40084816_40086706_40086854_40088241_40088501_40089205_40089334_40093019
transcript_85810.known	chr17	+	2421	10	FSM	ENSG00000126351.13	ENST00000584985.5	2421	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	6.84754619472471	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGTCTGCCTCCTCCCCC	40062798	False	NA	17	True	CATAAA	-18	NA	40062809	40093867	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_40063093_40074191_40074542_40076870_40076939_40077507_40077609_40083834_40083983_40084609_40084816_40086706_40086854_40088241_40088501_40089205_40089334_40093136
transcript_85811.known	chr17	+	5204	9	FSM	ENSG00000126351.13	ENST00000450525.7	5204	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	3.69966214673719	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCGTCTCGTAAAGGAG	40062385	True	NA	21	True	TATAAA	-22	NA	40062964	40093002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_40063093_40074191_40074542_40076870_40076939_40077507_40077609_40083834_40083983_40084609_40084816_40086706_40086854_40088241_40088501_40089205
transcript_85817.known	chr17	-	2630	8	FSM	ENSG00000126368.6	ENST00000246672.4	2630	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	8.65200224555813	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCTTCTGTGGTGTGTG	-40100001	True	NA	-6	True	NA	NA	NA	40100589	40092792	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_40093283_40093911_40094123_40094934_40095121_40095443_40096088_40096442_40096588_40096690_40096780_40097064_40097404_40100063
transcript_85823.known	chr17	+	5035	9	FSM	ENSG00000188895.12	ENST00000398532.9	5035	9	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_4	16.5680415257809	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAAGGTACTCACTTCCA	40121360	True	NA	NA	False	AATAAA	-29	NA	40121970	40136917	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_40123381_40126182_40126407_40129244_40129628_40131536_40131585_40132033_40132099_40133041_40133110_40133533_40133659_40133826_40133900_40134278
transcript_85827.known	chr17	+	2267	8	FSM	ENSG00000188895.12	ENST00000578648.5	2267	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	30.7192686987785	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAACAAACAACCTCACC	40122438	True	NA	NA	False	NA	NA	NA	40122583	40134810	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_40123381_40126182_40126407_40129244_40129628_40132033_40132099_40133041_40133110_40133533_40133659_40133826_40133900_40134278
transcript_85830.known	chr17	+	2081	3	FSM	ENSG00000188895.12	ENST00000577454.5	2081	3	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	7	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTTTCAAACAATAAGGA	40122427	True	NA	NA	False	AATAAA	-14	NA	40122572	40130293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_40123381_40126182_40126407_40129244
transcript_85835.known	chr17	+	3890	14	FSM	ENSG00000108349.17	ENST00000264645.12	3890	14	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_13	58.8052648289048	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCCTTGCCAGTGTTTTG	40126932	True	NA	18	True	AATAAA	-19	NA	40140536	40172171	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_40140780_40141206_40141235_40141569_40141608_40161752_40161912_40162001_40162154_40162724_40162902_40163480_40164167_40166796_40166862_40167497_40167613_40167849_40167949_40168202_40168418_40169323_40169447_40169597_40169663_40170446
transcript_85843.known	chr17	+	580	4	FSM	ENSG00000108349.17	ENST00000581849.1	580	4	0	0	0	0	multi-exon	FALSE	canonical	3	480	junction_2	18.2391520270726	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAGTGGGTAAAAAGGGC	40126932	True	NA	NA	False	NA	NA	NA	40140536	40162023	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_40140780_40141206_40141235_40141569_40141608_40161752
transcript_85844.known	chr17	+	3163	8	FSM	ENSG00000171475.14	ENST00000582781.5	3163	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	26.6764437858802	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTAATCACACACATCAC	40217232	True	NA	NA	False	NA	NA	NA	40219325	40279869	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_40219493_40256390_40256523_40260534_40260628_40262524_40262642_40264489_40265147_40273789_40274000_40277082_40277185_40278184
transcript_85845.known	chr17	+	7492	8	FSM	ENSG00000171475.14	ENST00000323571.9	7492	8	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_5	10.2180312812844	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTCCTCCTGACTTGAAA	40217210	True	NA	16	True	AATAAA	-21	NA	40219303	40284136	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_40219493_40256390_40256523_40260534_40260668_40262524_40262642_40264489_40265147_40273789_40274000_40277082_40277185_40278184
transcript_85849.known	chr17	+	1529	8	FSM	ENSG00000171475.14	ENST00000583130.5	1529	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	25.5726256703036	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCCCGTTCCTCAGG	40219779	True	NA	NA	False	NA	NA	NA	40219789	40278231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_40219921_40256390_40256523_40260534_40260668_40262524_40262642_40264489_40265147_40273789_40274000_40277082_40277185_40278184
transcript_85858.nnic	chr17	+	2210	6	NNC	ENSG00000171475.14	novel	7492	8	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	31.45536520214	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAATCACACACATCACAG	40217209	True	NA	NA	False	NA	NA	NA	40219302	40279871	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_40219493_40256390_40256523_40260534_40260668_40262524_40262642_40264489_40265068_40278811
transcript_85860.known	chr17	+	2378	6	FSM	ENSG00000171475.14	ENST00000394103.7	2378	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	30.6528954586675	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	40217263	True	NA	NA	False	NA	NA	NA	40219356	40279849	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_40219493_40256390_40256523_40260534_40260668_40273789_40274000_40277082_40277185_40278184
transcript_85867.known	chr17	+	4564	12	FSM	ENSG00000094804.12	ENST00000209728.9	4564	12	0	0	0	0	multi-exon	FALSE	canonical	3	679	junction_11	49.0477925131521	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGCCACAGATGTTTCT	40269477	True	NA	9	True	AATAAA	-19	NA	40287878	40304657	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_40288091_40289407_40289599_40291057_40291340_40291468_40291669_40293455_40293632_40293949_40294057_40294363_40294504_40295355_40295457_40296702_40296768_40300827_40301031_40301467_40301609_40301911
transcript_85877.known	chr17	+	1948	12	FSM	ENSG00000094804.12	ENST00000649662.1	1948	12	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	227.280908943642	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCACTTGTGTATCTCTAG	40269531	True	NA	-79	True	CATAAA	-41	NA	40287932	40302236	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_40287950_40289407_40289599_40291057_40291340_40291468_40291669_40293455_40293632_40293949_40294057_40294363_40294504_40295355_40295457_40296702_40296768_40300827_40301031_40301467_40301609_40301911
transcript_85895.known	chr17	+	3275	9	FSM	ENSG00000131759.18	ENST00000254066.10	3275	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	20.8712571494867	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGCCTCCAGCCTTGCT	40308949	True	NA	10	True	AATAAA	-16	NA	40309179	40357643	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_40309287_40330856_40331397_40348315_40348465_40349783_40349926_40351909_40352071_40352330_40352508_40354301_40354507_40355262_40355422_40356008
transcript_85896.known	chr17	+	2024	9	FSM	ENSG00000131759.18	ENST00000394089.6	2024	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	17.0861786248418	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCAGTACTGGGGACCTTC	40317065	True	NA	NA	False	NA	NA	NA	40318280	40356331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_40318449_40330856_40331397_40348315_40348465_40349783_40349926_40351909_40352071_40352330_40352508_40354301_40354507_40355262_40355422_40356008
transcript_85902.known	chr17	+	2285	8	FSM	ENSG00000131759.18	ENST00000394081.7	2285	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	13.3141017767797	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATACTGAAGGAATTTG	40342247	True	NA	7	True	NA	NA	NA	40342362	40356795	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_40342868_40348315_40348465_40349783_40349926_40351909_40352071_40352330_40352508_40354301_40354507_40355262_40355422_40356008
transcript_85906.known	chr17	-	5695	35	FSM	ENSG00000131747.15	ENST00000423485.6	5695	35	0	0	0	0	multi-exon	TRUE	canonical	1	587	junction_4	173.805694815138	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATAGAATGCCTCTTTTA	-40393709	True	NA	-5	True	AATAAA	-19	NA	40417896	40388524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_40389648_40389964_40390165_40391505_40391641_40392067_40392112_40392217_40392342_40392584_40392738_40395448_40395540_40396282_40396466_40398557_40398642_40398772_40398938_40399039_40399132_40399871_40400068_40400208_40400410_40400528_40400664_40400849_40401082_40402905_40403055_40404151_40404274_40404376_40404492_40404790_40404884_40406383_40406494_40406583_40406690_40406831_40406943_40407548_40407675_40407966_40408125_40408491_40408631_40411108_40411247_40411353_40411456_40411644_40411819_40412758_40412972_40413194_40413293_40413479_40413626_40416004_40416069_40416421_40416513_40416739_40416896_40417770
transcript_85911.nic	chr17	-	3967	29	ISM	ENSG00000131747.15	ENST00000423485.6	5695	35	-81	6954	-81	904	5prime_fragment	FALSE	canonical	3	1133	junction_20	112.399495922684	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GATTAGAAAAGAAACAGAAA	-40393790	True	NA	NA	False	AAAACA	-3	NA	40417977	40395478	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_40395540_40396282_40396466_40398557_40398642_40398772_40398938_40399039_40399132_40399871_40400068_40400208_40400410_40400528_40400664_40400849_40401082_40402905_40403055_40404151_40404274_40404376_40404492_40404790_40404884_40406383_40406494_40406583_40406690_40406831_40406943_40407548_40407675_40407966_40408125_40408491_40408631_40411108_40411247_40411353_40411456_40411644_40411819_40412758_40412972_40413194_40413293_40413479_40413626_40416004_40416069_40416421_40416513_40416739_40416896_40417770
transcript_85919.nic	chr17	-	3901	28	ISM	ENSG00000131747.15	ENST00000423485.6	5695	35	-81	7763	-81	95	5prime_fragment	FALSE	canonical	3	1133	junction_19	112.656706891697	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGTAATACTCTTGTGG	-40393790	True	NA	NA	False	AATAAA	-8	NA	40417977	40396287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_40396466_40398557_40398642_40398772_40398938_40399039_40399132_40399871_40400068_40400208_40400410_40400528_40400664_40400849_40401082_40402905_40403055_40404151_40404274_40404376_40404492_40404790_40404884_40406383_40406494_40406583_40406690_40406831_40406943_40407548_40407675_40407966_40408125_40408491_40408631_40411108_40411247_40411353_40411456_40411644_40411819_40412758_40412972_40413194_40413293_40413479_40413626_40416004_40416069_40416421_40416513_40416739_40416896_40417770
transcript_85926.nic	chr17	-	3609	26	ISM	ENSG00000131747.15	ENST00000423485.6	5695	35	-81	10278	-81	-2420	5prime_fragment	FALSE	canonical	3	1133	junction_17	116.693197745199	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAACTCTGCAGGCTAAG	-40393790	True	NA	NA	False	AAGAAA	-1	NA	40417977	40398802	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_40398938_40399039_40399132_40399871_40400068_40400208_40400410_40400528_40400664_40400849_40401082_40402905_40403055_40404151_40404274_40404376_40404492_40404790_40404884_40406383_40406494_40406583_40406690_40406831_40406943_40407548_40407675_40407966_40408125_40408491_40408631_40411108_40411247_40411353_40411456_40411644_40411819_40412758_40412972_40413194_40413293_40413479_40413626_40416004_40416069_40416421_40416513_40416739_40416896_40417770
transcript_85928.nic	chr17	-	3373	24	ISM	ENSG00000131747.15	ENST00000423485.6	5695	35	-81	11356	-81	-3498	5prime_fragment	FALSE	canonical	3	1133	junction_15	120.783281683416	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCATTGGTATGTTTTGG	-40393790	True	NA	NA	False	AATAGA	-9	NA	40417977	40399880	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_40400068_40400208_40400410_40400528_40400664_40400849_40401082_40402905_40403055_40404151_40404274_40404376_40404492_40404790_40404884_40406383_40406494_40406583_40406690_40406831_40406943_40407548_40407675_40407966_40408125_40408491_40408631_40411108_40411247_40411353_40411456_40411644_40411819_40412758_40412972_40413194_40413293_40413479_40413626_40416004_40416069_40416421_40416513_40416739_40416896_40417770
transcript_85938.nic	chr17	-	2007	15	ISM	ENSG00000131747.15	ENST00000423485.6	5695	35	-81	18081	-81	6874	5prime_fragment	FALSE	canonical	3	1133	junction_6	120.250185625042	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAAAGTCAAATATTACAA	-40393790	True	NA	NA	False	CATAAA	-4	NA	40417977	40406605	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_40406690_40406831_40406943_40407548_40407675_40407966_40408125_40408491_40408631_40411108_40411247_40411353_40411456_40411644_40411819_40412758_40412972_40413194_40413293_40413479_40413626_40416004_40416069_40416421_40416513_40416739_40416896_40417770
transcript_85952.known	chr17	+	2205	4	FSM	ENSG00000141753.7	ENST00000269593.5	2205	4	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_1	25.381533094402	2018	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGATTGTGTTTGGTTGAT	40437552	True	NA	12	True	AAAACA	-23	NA	40443449	40457725	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_40444085_40452984_40453143_40453927_40454063_40456448
transcript_85953.known	chr17	-	4087	13	FSM	ENSG00000131746.13	ENST00000254051.11	4087	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.640095478989051	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTAAGTTCTGAGGCAGTC	-40501566	True	NA	NA	False	AATAAA	-19	NA	40501623	40475833	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_40477730_40478306_40478334_40478579_40478649_40479673_40479843_40480699_40480769_40482128_40482207_40482323_40482417_40484483_40484610_40484920_40485008_40487035_40487461_40488545_40488970_40495986_40496521_40501533
transcript_85954.known	chr17	-	2173	3	FSM	ENSG00000126353.3	ENST00000246657.2	2173	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCGTGTCTTTGTTTTGC	NA	False	NA	0	True	AAAAAG	-29	NA	40565472	40553768	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_40555819_40558892_40558943_40565399
transcript_85956.known	chr17	-	2491	12	FSM	ENSG00000073584.20	ENST00000647294.1	2491	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	441.340744654923	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGTCCAAATGTAATAAAAA	-40639973	True	NA	NA	False	AATAGA	-44	NA	40647844	40627744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_40628994_40630713_40630925_40631591_40631694_40632194_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40639980_40640079_40642454_40642560_40645575_40645620_40645795_40645848_40647772
transcript_85957.known	chr17	-	2488	12	FSM	ENSG00000073584.20	ENST00000644701.1	2488	12	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	416.864982006333	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGAAAAAAAGGTCTCAG	-40639966	True	NA	NA	False	AATAAA	-6	NA	40647837	40627721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_40628994_40630207_40630287_40630713_40630925_40631591_40631694_40632194_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40642454_40642560_40645575_40645620_40645795_40645848_40647772
transcript_85960.known	chr17	-	5150	11	FSM	ENSG00000073584.20	ENST00000348513.12	5150	11	0	0	0	0	multi-exon	FALSE	canonical	3	1043	junction_2	75.0392563929041	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGTTTTTAAGAGCCTGA	-40639947	True	NA	0	True	ATTAAA	-18	NA	40647818	40624961	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_40628994_40630713_40630925_40631591_40631694_40632194_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40642454_40642560_40645575_40645620_40645795_40645848_40647772
transcript_85964.known	chr17	-	2840	10	FSM	ENSG00000073584.20	ENST00000647508.1	2840	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	358.912279939483	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAAAAGGTCTCAGTGT	-40648315	False	NA	NA	False	AATAAA	-9	NA	40648370	40627718	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_40628994_40630713_40630925_40631591_40631694_40632194_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40645575_40645620_40645795_40645848_40647772
transcript_85967.known	chr17	-	2388	10	FSM	ENSG00000073584.20	ENST00000578112.6	2388	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	364.730070999579	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTCAGTGTTTTTAATGC	-40639977	True	NA	NA	False	AATAAA	-18	NA	40647848	40627709	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_40628994_40630713_40630925_40631591_40631694_40632194_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40642454_40642560_40645795_40645848_40647772
transcript_85971.nic	chr17	-	483	6	ISM	ENSG00000073584.20	ENST00000447024.6	1973	11	-13	6953	0	0	5prime_fragment	FALSE	canonical	3	1152	junction_4	16.9870538940689	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACGAAGCAGAAAAGGTAGGG	-40639984	True	NA	-7	True	AAGAAA	-22	NA	40647855	40636408	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_40636527_40637491_40637573_40642454_40642560_40645575_40645620_40645795_40645848_40647772
transcript_85972.known	chr17	-	2156	4	FSM	ENSG00000073584.20	ENST00000474246.2	2156	4	0	0	0	0	multi-exon	FALSE	canonical	3	1152	junction_2	4.32049379893857	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGACCCTAGTTATGCAT	-40639975	True	NA	-9	True	AATAAA	-16	NA	40647846	40640573	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_40642560_40645575_40645620_40645795_40645848_40647772
transcript_85973.known	chr17	-	2997	12	FSM	ENSG00000073584.20	ENST00000264640.9	2997	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	430.910299192782	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATAGTGGTATATCTGAT	-40639959	True	NA	NA	False	AATAGA	-8	NA	40647830	40627780	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_40629569_40630207_40630287_40630713_40630925_40631591_40631694_40632194_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40642454_40642560_40645575_40645620_40645795_40645848_40647772
transcript_85974.known	chr17	+	2070	3	FSM	ENSG00000167920.11	ENST00000301665.8	2070	3	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	9	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGTGTGTGTGGTTT	40818063	True	NA	5	True	ATTAAA	-15	NA	40819112	40836270	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_40819209_40833114_40833200_40834381
transcript_85976.known	chr17	+	854	3	FSM	ENSG00000167920.11	ENST00000436612.5	854	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	51	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTAGTTTTCATGACTTCT	40818056	True	NA	9	True	AATAAA	-15	NA	40819105	40835085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_40819171_40833114_40833200_40834381
transcript_85978.known	chr17	-	2163	8	FSM	ENSG00000186395.9	ENST00000635956.2	2163	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	30.0937311256219	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAATTTGTCAGAATTTA	NA	False	NA	-2	True	AATAAA	-22	NA	40822614	40818116	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_40818483_40818766_40819162_40819516_40819735_40820048_40820175_40820261_40820424_40820510_40820668_40821034_40821118_40821958
transcript_85979.known	chr17	-	2143	8	FSM	ENSG00000186395.9	ENST00000269576.6	2143	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	492.697365405531	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAATTTGTCAGAATTTA	NA	False	NA	-2	True	AATAAA	-22	NA	40822614	40818116	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_40818483_40818786_40819162_40819516_40819735_40820048_40820175_40820261_40820424_40820510_40820668_40821034_40821118_40821958
transcript_8598.known	chr1	+	1018	4	FSM	ENSG00000117448.14	ENST00000471651.1	1018	4	0	0	0	0	multi-exon	FALSE	canonical	3	1066	junction_1	215.382347362906	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTAAGGCGGGCGGATCA	45548839	True	NA	NA	False	NA	NA	NA	45551067	45567588	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45551156_45561788_45561879_45566568_45566689_45566868
transcript_85982.known	chr17	-	1390	6	FSM	ENSG00000171345.13	ENST00000361566.7	1390	6	0	0	0	0	multi-exon	FALSE	canonical	3	1126	junction_5	79.8298189901493	1645	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGGACGTTTGGTTTATT	-41525899	True	NA	-6	True	AATAAA	-19	NA	41528308	41523616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41523998_41524142_41524269_41524378_41524541_41524842_41525000_41525190_41525274_41527827
transcript_85987.known	chr17	-	1517	8	FSM	ENSG00000128422.18	ENST00000311208.13	1517	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	3.88087934491604	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAATGTGTCCTTGTTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	41624575	41619441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41619689_41620535_41620559_41620658_41620880_41620965_41621092_41621592_41621755_41622354_41622512_41622949_41623033_41624077
transcript_85988.known	chr17	-	684	4	FSM	ENSG00000128422.18	ENST00000649249.1	684	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	1.63299316185545	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTCCTTGCCTGATGAC	-41621163	True	NA	-45	True	NA	NA	NA	41621201	41619484	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41619689_41620535_41620559_41620658_41620880_41620965
transcript_85989.known	chr17	+	2338	4	FSM	ENSG00000173812.11	ENST00000469257.2	2338	4	0	0	0	0	multi-exon	FALSE	canonical	3	3824	junction_1	325.419046086051	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTTTGGTGACTTTTT	41632428	True	NA	11	True	AATAAA	-17	NA	41688884	41692668	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_41689070_41689777_41689942_41690087_41690190_41690781
transcript_85991.nic	chr17	+	779	3	ISM	ENSG00000173812.11	ENST00000469308.1	815	4	548	0	-420	0	3prime_fragment	FALSE	canonical	3	4379	junction_1	109	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTCTAGTCTTGAAGTC	41689459	True	NA	16	True	AATAAA	-14	NA	41689482	41690999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_41689942_41690087_41690190_41690781
transcript_85992.nic	chr17	+	2026	3	NIC	ENSG00000173812.11	novel	2338	4	NA	NA	-2	0	intron_retention	FALSE	canonical	3	4379	junction_1	109	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGACTTGCAGATTATTTA	41632426	True	NA	22	True	AATAAA	-18	NA	41688882	41691646	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_41689942_41690087_41690190_41690781
transcript_85993.known	chr17	+	1120	3	FSM	ENSG00000173812.11	ENST00000310837.8	1120	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	2284	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTTTCAGAAATACCTG	41632444	False	NA	6	True	AATAAA	-2	NA	41688900	41691630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_41689070_41690087_41690190_41690781
transcript_85995.known	chr17	+	2170	2	FSM	ENSG00000173812.11	ENST00000462917.1	2170	2	0	0	0	0	multi-exon	FALSE	canonical	3	4597	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGACTTGCAGATTATTTA	41632428	True	NA	22	True	AATAAA	-18	NA	41688884	41691646	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_41690190_41690781
transcript_86006.nnic	chr17	-	3533	10	NIC	ENSG00000173805.16	novel	4087	12	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	6.99205898780101	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCCTCCAGCTGTCTC	-41733822	False	NA	-1	True	AATAAA	-18	NA	41734646	41722639	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_41724830_41725858_41725898_41727052_41727145_41728200_41728332_41731492_41731560_41731637_41731744_41731936_41732119_41732229_41732395_41732718_41732799_41734165
transcript_86009.known	chr17	-	3880	10	FSM	ENSG00000173805.16	ENST00000341193.9	3880	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	8.09358837843303	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCCTCCAGCTGTCTC	-41733820	True	NA	-1	True	AATAAA	-18	NA	41734644	41722639	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41725155_41725858_41725898_41727052_41727145_41728200_41728332_41731492_41731560_41731637_41731744_41731936_41732119_41732229_41732395_41732694_41732799_41734165
transcript_8601.known	chr1	+	775	3	FSM	ENSG00000117448.14	ENST00000496999.5	775	3	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	667.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAGGCAGTCTCACATG	45538077	True	NA	NA	False	NA	NA	NA	45550845	45567213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45551156_45566568_45566689_45566868
transcript_86010.known	chr17	-	5683	10	FSM	ENSG00000173805.16	ENST00000393939.6	5683	10	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_4	6.0736223860962	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAATAT	-41733820	True	NA	NA	False	NA	NA	NA	41734644	41720812	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41725155_41725858_41725898_41727052_41727145_41728200_41728332_41731492_41731560_41731637_41731744_41731936_41732119_41732229_41732395_41732718_41732799_41734165
transcript_86016.known	chr17	-	3930	11	FSM	ENSG00000173805.16	ENST00000347901.9	3930	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	8.02558409089332	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCCTCCAGCTGTCTC	-41733819	True	NA	-1	True	AATAAA	-18	NA	41734643	41722639	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41725155_41725858_41725898_41727052_41727145_41727761_41727837_41728200_41728332_41731492_41731560_41731637_41731744_41731936_41732119_41732229_41732395_41732718_41732799_41734165
transcript_86032.known	chr17	-	3298	15	FSM	ENSG00000173801.17	ENST00000393930.5	3298	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_14	135.594326682835	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGTTTAGGGGAGTGG	-41771791	False	NA	-1	True	AATAAA	-19	NA	41785155	41754603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41755433_41755729_41755896_41756174_41756215_41757414_41757537_41757633_41757785_41758398_41758519_41758714_41758871_41762982_41763322_41764712_41764817_41764922_41765068_41767378_41767581_41768968_41769208_41769417_41769678_41771646_41771863_41784946
transcript_86035.nic	chr17	-	3615	15	NIC	ENSG00000173801.17	novel	3298	15	NA	NA	-219	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_14	130.1816627107	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGTTTAGGGGAGTGG	-41773064	False	13364	-1	True	AATAAA	-19	NA	41786428	41754603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_41755433_41755729_41755896_41756174_41756215_41757414_41757537_41757633_41757785_41758398_41758519_41758714_41758871_41762982_41763322_41764712_41764817_41764922_41765068_41767378_41767581_41768968_41769208_41769417_41769678_41771646_41771863_41785902
transcript_86039.nnic	chr17	-	3290	15	NNC	ENSG00000173801.17	novel	3200	15	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	93	junction_14	114.248141145062	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGTTTAGGGGAGTGG	NA	False	NA	-1	True	AATAAA	-19	NA	41786766	41754603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_41755433_41755729_41755896_41756174_41756215_41757414_41757537_41757633_41757785_41758398_41758519_41758714_41758871_41762982_41763322_41764712_41764817_41764922_41765068_41767378_41767581_41768968_41769208_41769417_41769678_41771646_41771863_41786565
transcript_86040.known	chr17	-	3200	15	FSM	ENSG00000173801.17	ENST00000310706.9	3200	15	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_14	75.8590597013667	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGTTTAGGGGAGTGG	-41773334	True	NA	-1	True	AATAAA	-19	NA	41786698	41754603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41755433_41755729_41755896_41756174_41756215_41757414_41757537_41757633_41757785_41758398_41758519_41758714_41758871_41762982_41763322_41764712_41764817_41764922_41765068_41767378_41767581_41768968_41769208_41769417_41769678_41771646_41771863_41786587
transcript_86057.nnic	chr17	-	3582	14	NNC	ENSG00000173801.17	novel	3505	14	NA	NA	-1	0	intron_retention	FALSE	canonical	3	93	junction_13	112.301896583857	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGGAGGCTGTTTAGGGG	NA	False	NA	-6	True	AATAAA	-14	NA	41786766	41754608	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_41755896_41756174_41756215_41757414_41757537_41757633_41757785_41758398_41758519_41758714_41758871_41762982_41763322_41764712_41764817_41764922_41765068_41767378_41767581_41768968_41769208_41769417_41769678_41771646_41771863_41786565
transcript_86058.known	chr17	-	3505	14	FSM	ENSG00000173801.17	ENST00000393931.8	3505	14	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_13	66.7112474215884	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGGAGGCTGTTTAGGGG	-41773347	True	NA	-6	True	AATAAA	-14	NA	41786711	41754608	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41755896_41756174_41756215_41757414_41757537_41757633_41757785_41758398_41758519_41758714_41758871_41762982_41763322_41764712_41764817_41764922_41765068_41767378_41767581_41768968_41769208_41769417_41769678_41771646_41771863_41786587
transcript_86068.known	chr17	-	2791	9	FSM	ENSG00000141696.13	ENST00000355468.7	2791	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	59.3738157776641	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACCCGTGGTCGTCTCCCT	-41812592	False	274	-7	True	AATAAA	-24	NA	41812603	41801946	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41802980_41803286_41803432_41806795_41806880_41807858_41808005_41809705_41809835_41810862_41811035_41811131_41811285_41811453_41812143_41812363
transcript_86077.known	chr17	-	2352	8	FSM	ENSG00000141696.13	ENST00000393928.6	2352	8	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_5	18.8517308251004	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATAGTACCCGTGGTCGT	-41810512	True	NA	-13	True	AATAAA	-18	NA	41811949	41801952	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41802980_41803286_41803432_41806795_41806880_41807858_41808005_41809705_41809835_41810862_41811035_41811131_41811285_41811453
transcript_86144.known	chr17	+	2585	10	FSM	ENSG00000141756.19	ENST00000321562.9	2585	10	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_7	20.0929936809259	919	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTTAGGGTGTCTTTTG	41799427	True	NA	13	True	AATAAA	-13	NA	41813003	41823213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_41813280_41817057_41817204_41818088_41818279_41818381_41818528_41819209_41819400_41819529_41819676_41820268_41820462_41820946_41821090_41821653_41821818_41822222
transcript_8615.known	chr1	+	3225	15	FSM	ENSG00000132780.17	ENST00000350030.8	3225	15	0	0	0	0	multi-exon	FALSE	canonical	3	925	junction_5	518.28739269692	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTCTGGAATTATGTT	45547889	True	NA	18	True	AATAAA	-14	NA	45584040	45618893	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45584206_45591222_45591271_45602254_45602366_45604935_45605017_45606481_45606592_45607320_45608338_45613168_45613249_45614095_45614182_45614292_45614367_45615012_45615202_45615304_45615472_45616336_45616394_45616625_45616704_45617462_45617592_45618060
transcript_86151.known	chr17	-	1573	9	FSM	ENSG00000141698.17	ENST00000469698.5	1573	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_8	218.617102487431	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTCTGATTCAGGGGAT	-41827989	True	NA	-3	True	AATATA	-40	NA	41836202	41825180	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41825658_41827425_41827627_41828789_41828953_41830800_41830891_41832391_41832478_41835069_41835117_41835202_41835273_41835587_41835683_41835858
transcript_86152.nic	chr17	-	1433	9	NIC	ENSG00000141698.17	novel	1534	8	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	179.617258009914	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTCTGATTCAGGGGAT	-41828065	True	NA	-3	True	AATATA	-40	NA	41836278	41825180	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_41825658_41827425_41827627_41828789_41828953_41830800_41830891_41832391_41832478_41835069_41835117_41835202_41835273_41835858_41835958_41836078
transcript_86153.known	chr17	-	1408	9	FSM	ENSG00000141698.17	ENST00000435506.7	1408	9	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_8	133.413829867821	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGCCTGATTGTGTCTG	-41828019	True	NA	NA	False	NA	NA	NA	41836232	41825056	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41825658_41827425_41827627_41828789_41828953_41830800_41830891_41832391_41832478_41835069_41835117_41835202_41835273_41835858_41835958_41836181
transcript_86154.known	chr17	-	1729	8	FSM	ENSG00000141698.17	ENST00000470690.5	1729	8	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_7	175.578809562393	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAATGTGTGAAACAG	-41828015	True	NA	-49	True	TTTAAA	-17	NA	41836228	41825226	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41825658_41827425_41827627_41828789_41828953_41830800_41830891_41832391_41832478_41835069_41835117_41835202_41835273_41835587
transcript_86155.known	chr17	-	1534	8	FSM	ENSG00000141698.17	ENST00000523903.5	1534	8	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_2	35.29641249042	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTCTGATTCAGGGGAT	-41828045	True	NA	-3	True	AATATA	-40	NA	41836258	41825180	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41825658_41827425_41827627_41828789_41828953_41830800_41830891_41832391_41832478_41835069_41835117_41835202_41835273_41835858
transcript_86165.known	chr17	-	1253	7	FSM	ENSG00000141698.17	ENST00000393910.5	1253	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	196.61107971492	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGTTCAAACAAATATAAT	-41827984	True	NA	-60	True	TTTAAA	-6	NA	41836197	41825237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41825658_41827425_41827627_41830800_41830891_41832391_41832478_41835069_41835117_41835202_41835273_41835858
transcript_86174.known	chr17	-	7402	2	FSM	ENSG00000178502.6	ENST00000319121.4	7402	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTTTGTACTGTGTGAC	-41864091	True	NA	-5	True	AATAAA	-15	NA	41865423	41848517	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41855322_41864825
transcript_86179.known	chr17	-	4293	29	FSM	ENSG00000131473.17	ENST00000352035.7	4293	29	0	0	0	0	multi-exon	TRUE	canonical	3	805	junction_16	278.84096850048	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCTGGCTCCTGGCATC	-41882131	True	NA	-17	True	AATAAA	-23	NA	41918951	41866917	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41867905_41868708_41868786_41869042_41869126_41869473_41869588_41871688_41871833_41872031_41872183_41873810_41873966_41878102_41878197_41878796_41878925_41883121_41883233_41884192_41884275_41886111_41886309_41887598_41887704_41892278_41892448_41893032_41893175_41896619_41896650_41897748_41897840_41898630_41898786_41901695_41901814_41904728_41904791_41905521_41905659_41906527_41906647_41907441_41907573_41908988_41909069_41909509_41909701_41910221_41910285_41912419_41912543_41913714_41913897_41918879
transcript_86186.known	chr17	-	3682	28	FSM	ENSG00000131473.17	ENST00000393896.6	3682	28	0	0	0	0	multi-exon	TRUE	canonical	3	423	junction_27	336.773193430598	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGCTCTGCTACCTGCT	-41882202	True	NA	-13	True	AATAAA	-20	NA	41919022	41867573	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41867905_41868708_41868786_41869042_41869126_41869473_41869588_41871688_41871833_41872031_41872183_41873810_41873966_41878102_41878197_41878796_41878925_41883121_41883233_41884192_41884275_41886111_41886309_41887598_41887704_41892278_41892448_41893032_41893175_41897748_41897840_41898630_41898786_41901695_41901814_41904728_41904791_41905521_41905659_41906527_41906647_41907441_41907573_41908988_41909069_41909509_41909701_41910221_41910285_41912419_41912543_41913714_41913901_41918879
transcript_86222.known	chr17	+	3146	12	FSM	ENSG00000204815.10	ENST00000377540.6	3146	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.66597787247549	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCTCACTCACTTCCT	41930417	True	NA	NA	False	AATAAA	-38	NA	41930616	41966503	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_41930838_41935216_41935349_41935598_41935750_41936472_41936535_41936761_41936928_41938556_41938782_41938964_41939173_41945135_41945223_41949152_41949350_41955216_41955318_41961381_41961467_41964992
transcript_86227.known	chr17	-	1876	15	FSM	ENSG00000168259.17	ENST00000586335.2	1876	15	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	273.63005712689	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATGTTTTGACCCTTCC	-42007895	True	NA	-38	True	ATTAAA	-20	NA	42017431	41976456	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987594_41987695_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42017339
transcript_86228.known	chr17	-	1909	15	FSM	ENSG00000168259.17	ENST00000585866.6	1909	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_14	282.193856150306	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGGACAGGGAGGCAGCT	-42007903	True	NA	-36	True	NA	NA	NA	42017439	41976530	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42003358_42003558_42017339
transcript_8623.known	chr1	+	1538	14	FSM	ENSG00000132780.17	ENST00000351223.7	1538	14	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_5	621.329572666409	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGAGGCTTTGATGGTTT	45547913	True	NA	14	True	AATAAA	-14	NA	45584064	45618247	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45584206_45591222_45591271_45602254_45602366_45604935_45605017_45606481_45606592_45613168_45613249_45614095_45614182_45614292_45614367_45615012_45615202_45615304_45615472_45616336_45616394_45616625_45616704_45617462_45617592_45618060
transcript_86231.known	chr17	-	1729	14	FSM	ENSG00000168259.17	ENST00000674166.1	1729	14	0	0	0	0	multi-exon	TRUE	canonical	3	79	junction_13	203.699395647072	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGAGGCAGCTTGTGAATT	-42014398	False	9536	-28	True	NA	NA	NA	42017162	41976522	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42017051
transcript_86232.known	chr17	-	1719	14	FSM	ENSG00000168259.17	ENST00000674233.1	1719	14	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	219.702757777748	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGAGGCAGCTTGTGAATT	-42007895	True	NA	-28	True	NA	NA	NA	42017431	41976522	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982245_41982402_41983562_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42017339
transcript_86233.known	chr17	-	1692	14	FSM	ENSG00000168259.17	ENST00000674214.1	1692	14	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_13	178.367879932784	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCGGGGGTGGACAGGGA	-42015762	True	NA	-43	True	NA	NA	NA	42018526	41976537	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42018437
transcript_86238.known	chr17	-	1658	13	FSM	ENSG00000168259.17	ENST00000674306.1	1658	13	0	0	0	0	multi-exon	FALSE	canonical	1	19	junction_10	231.743392570317	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAGAGAATAAA	-42007907	True	NA	22	True	ATTAAA	-4	NA	42017443	41976472	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41997114_41997240_42000481_42000571_42017339
transcript_86245.nic	chr17	-	1131	10	ISM	ENSG00000168259.17	ENST00000585693.2	1782	12	-26	2085	-21	-2085	5prime_fragment	FALSE	canonical	3	572	junction_9	95.8418192700225	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAGTTTAAAAGCATTTG	-42007928	True	NA	16	True	AAAAAG	-24	NA	42017464	41983563	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42017339
transcript_86247.known	chr17	-	2124	10	FSM	ENSG00000168259.17	ENST00000674175.1	2124	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	238.195738577631	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATACATGAAGGTGTTTG	-42007891	True	NA	NA	False	NA	NA	NA	42017427	41986591	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41987695_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42017339
transcript_86252.known	chr17	-	1572	9	FSM	ENSG00000187595.17	ENST00000436535.5	2893	9	0	1321	0	-1272	multi-exon	FALSE	canonical	2	3	junction_5	11.409973707244	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCATGGGGAGGCCAGAG	-42098371	False	NA	NA	False	NA	NA	NA	42098479	42026896	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42027134_42027632_42027729_42028049_42028247_42028782_42029077_42031618_42031785_42034224_42034336_42037736_42037886_42062806_42063059_42098409
transcript_86255.known	chr17	-	3295	8	FSM	ENSG00000168259.17	ENST00000674337.1	3295	8	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_7	86.6965150065775	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCTATAATAGCAAAAAAAAA	-42014858	False	NA	NA	False	NA	NA	NA	42017622	41986560	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42017339
transcript_86269.known	chr17	+	997	5	FSM	ENSG00000168256.18	ENST00000485789.5	997	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	109.68449069946	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCCCATCAGCGACACACA	42014308	True	NA	NA	False	NA	NA	NA	42020077	42024265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42020205_42021563_42021672_42022398_42022473_42022564_42022641_42023653
transcript_86276.known	chr17	+	2583	4	FSM	ENSG00000173786.17	ENST00000393888.1	2583	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	139.557236366382	1187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCAGTCTCTCTTACC	41964179	True	NA	17	True	AATAAA	-17	NA	41966814	41975176	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_41966888_41968072_41968741_41971891_41972032_41973474
transcript_86282.known	chr17	+	1041	4	FSM	ENSG00000168256.18	ENST00000491638.5	1041	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	121.387350613187	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTCTGAGTTCCTATT	42014334	True	NA	NA	False	NA	NA	NA	42020103	42024220	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42020205_42021563_42021672_42022375_42022641_42023653
transcript_86284.known	chr17	+	1461	4	FSM	ENSG00000168256.18	ENST00000449471.8	1461	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	116.810387665938	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGCAGATGGGCCTCACT	42014336	True	NA	NA	False	NA	NA	NA	42020105	42024833	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42020205_42021563_42021672_42022398_42022473_42023653
transcript_86287.known	chr17	+	1598	4	FSM	ENSG00000168256.18	ENST00000393881.7	1598	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	133.868094281896	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAAAAAAAATTC	42014327	True	NA	NA	False	NA	NA	NA	42020096	42024774	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42020205_42021544_42021672_42022398_42022641_42023653
transcript_86291.known	chr17	+	1644	4	FSM	ENSG00000168256.18	ENST00000393880.5	1644	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	132.926880485309	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAAAAAAAATTC	42014327	True	NA	NA	False	NA	NA	NA	42020096	42024774	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42020270_42021563_42021672_42022398_42022641_42023653
transcript_86294.known	chr17	-	1989	4	FSM	ENSG00000187595.17	ENST00000461831.1	1989	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	8.33999733546454	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTGTGTCCTAATTC	-42028434	True	NA	0	True	AATAAA	-17	NA	42028689	42025575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42027134_42027617_42027729_42028049_42028247_42028566
transcript_86298.known	chr17	+	1019	3	FSM	ENSG00000173786.17	ENST00000472031.1	1019	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	150	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGGTTAGCTCAGCCCC	41964127	True	NA	NA	False	NA	NA	NA	41966762	41974228	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_41966888_41971891_41972032_41973474
transcript_86299.known	chr17	+	585	3	FSM	ENSG00000168256.18	ENST00000462043.6	585	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	120.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCACTTTGCTCCCTCTCA	42014331	True	NA	NA	False	NA	NA	NA	42020100	42024026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42020205_42021563_42021672_42023653
transcript_86300.known	chr17	-	3733	3	FSM	ENSG00000267221.3	ENST00000587304.3	3733	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	3.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTCTCCATGGTGGTGT	-42050489	True	NA	0	True	AATAAA	-20	NA	42050601	42038231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42041190_42042833_42043564_42050556
transcript_86312.known	chr17	-	2990	18	FSM	ENSG00000108773.11	ENST00000465682.5	2990	18	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_12	29.0298736479138	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTGATTGTTTCTTT	-42120980	False	NA	-9	True	AATAAA	-12	NA	42121058	42113117	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42113843_42113999_42114085_42114218_42114283_42114357_42114395_42114489_42114605_42114891_42115036_42115722_42115834_42117034_42117162_42117387_42117597_42117677_42117815_42117906_42118018_42118296_42118404_42119053_42119437_42119536_42119719_42120029_42120120_42120224_42120371_42120705_42120830_42120965
transcript_86314.known	chr17	-	3115	18	FSM	ENSG00000108773.11	ENST00000225916.10	3115	18	0	0	0	0	multi-exon	TRUE	canonical	3	68	junction_12	35.4885819154102	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGTTTCTTTGGTGTAG	-42118634	True	NA	-2	True	AATAAA	-19	NA	42121367	42113110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42113843_42113999_42114085_42114218_42114283_42114357_42114395_42114489_42114605_42114891_42115036_42115722_42115834_42117034_42117162_42117387_42117597_42117677_42117815_42117906_42118018_42118296_42118404_42119244_42119437_42119536_42119719_42120029_42120120_42120224_42120371_42120705_42120830_42120965
transcript_8634.known	chr1	+	3097	13	FSM	ENSG00000132780.17	ENST00000537798.5	3097	13	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_2	698.984913801594	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATGTTTAAAGATCTTA	45583936	True	NA	29	True	AATAAA	-25	NA	45583987	45618904	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45584206_45591222_45591271_45606481_45606592_45607320_45608338_45613168_45613249_45614095_45614182_45614292_45614367_45615012_45615202_45615304_45615472_45616336_45616394_45616625_45616704_45617462_45617592_45618060
transcript_86368.nic	chr17	-	1764	7	NIC	ENSG00000108774.15	novel	1640	6	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_6	317.896034717152	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATTGTCTTCCTTGTCTTT	-42141457	True	NA	-3	True	AATATA	-23	NA	42154996	42124978	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_42125899_42126754_42126849_42128260_42128384_42128648_42128801_42130336_42130591_42137761_42137879_42154892
transcript_8637.known	chr1	+	2080	12	FSM	ENSG00000132780.17	ENST00000453748.5	2080	12	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	674.366418288828	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAGAAATTGAGGAACT	45547893	True	NA	-34	True	ACTAAA	-41	NA	45584044	45615354	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45584206_45591222_45591271_45600384_45600458_45602254_45602366_45604935_45605017_45606481_45606592_45607320_45608338_45613168_45613249_45614095_45614182_45614292_45614367_45615012_45615202_45615304
transcript_86371.known	chr17	-	1640	6	FSM	ENSG00000108774.15	ENST00000346213.9	1640	6	0	0	0	0	multi-exon	FALSE	canonical	3	641	junction_2	31.6455368101096	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATTGTCTTCCTTGTCTTT	-42141450	True	NA	-3	True	AATATA	-23	NA	42154989	42124978	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42125899_42126754_42126849_42128260_42128384_42128648_42128801_42130336_42130591_42154892
transcript_86379.known	chr17	-	608	3	FSM	ENSG00000108774.15	ENST00000546881.1	608	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	357.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGGGTGGGGGGTGGGC	-42141453	True	NA	NA	False	NA	NA	NA	42154992	42128550	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42128801_42130336_42130591_42154888
transcript_86380.known	chr17	-	555	2	FSM	ENSG00000108774.15	ENST00000550013.1	555	2	0	0	0	0	multi-exon	FALSE	canonical	3	733	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTCAAGCATCGCTAGT	-42141478	True	NA	NA	False	NA	NA	NA	42155017	42130160	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42130591_42154892
transcript_86383.known	chr17	-	2408	10	FSM	ENSG00000167925.16	ENST00000587427.6	2408	10	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_6	2.49443825784929	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGCCTCAGGGTCTGCT	-42193837	True	NA	0	True	AATAAA	-16	NA	42194494	42189086	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42189922_42190184_42190271_42190623_42190758_42190831_42190904_42191017_42191211_42192240_42192743_42192905_42193028_42193316_42193595_42193766_42193851_42194392
transcript_86386.known	chr17	-	2496	10	FSM	ENSG00000167925.16	ENST00000414034.7	2496	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6.97791931915893	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTGCCTCAGGGTCTGC	-42193837	True	NA	-1	True	AATAAA	-15	NA	42194494	42189087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42189922_42190184_42190360_42190623_42190758_42190831_42190904_42191017_42191211_42192240_42192743_42192905_42193028_42193316_42193595_42193766_42193851_42194392
transcript_86393.known	chr17	-	5079	19	FSM	ENSG00000173757.10	ENST00000293328.8	5079	19	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_18	19.8236826816242	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTATTGAGTCCTGTTTTT	-42274472	True	NA	-8	True	AATAAA	-18	NA	42276391	42199176	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42201865_42202339_42202448_42202756_42202809_42207557_42207729_42210170_42210302_42210402_42210498_42211983_42212191_42216013_42216107_42217159_42217283_42217376_42217465_42218150_42218331_42218722_42218879_42219311_42219464_42219711_42219843_42223381_42223557_42224778_42224869_42227528_42227686_42231999_42232138_42276247
transcript_86410.known	chr17	-	1799	9	FSM	ENSG00000173757.10	ENST00000468312.1	1799	9	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_8	13.8721843990051	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCTTAGGAACTGTTTT	-42274487	True	NA	NA	False	NA	NA	NA	42276406	42217689	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42218331_42218722_42218879_42219311_42219464_42219711_42219843_42223381_42223557_42224778_42224869_42227528_42227686_42231999_42232138_42276247
transcript_86419.known	chr17	+	3770	19	FSM	ENSG00000126561.18	ENST00000590949.6	3770	19	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	35.5998422107753	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGCTATGGCTCCTGG	42288176	True	NA	NA	False	AATAAA	-17	NA	42288497	42311943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42288599_42289401_42289540_42289865_42290023_42291971_42292062_42295618_42295794_42299750_42299882_42300129_42300282_42300714_42300871_42301274_42301455_42304341_42304430_42304529_42304653_42305609_42305703_42306240_42306448_42307401_42307497_42307592_42307724_42308177_42308334_42309046_42309099_42309376_42309485_42310506
transcript_86420.known	chr17	+	3086	18	FSM	ENSG00000126561.18	ENST00000546010.6	3086	18	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	37.375305949379	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCTGTCACTGCAGGCA	NA	False	NA	NA	False	NA	NA	NA	42288075	42310927	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42288599_42289401_42289540_42289865_42290023_42295618_42295794_42299750_42299882_42300129_42300282_42300714_42300871_42301274_42301455_42304341_42304430_42304529_42304653_42305609_42305703_42306240_42306448_42307401_42307497_42307592_42307724_42308177_42308334_42309046_42309099_42309376_42309485_42310506
transcript_86421.known	chr17	+	3858	18	FSM	ENSG00000126561.18	ENST00000677301.1	3858	18	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	36.3966042752365	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGCTATGGCTCCTGG	42288891	False	NA	NA	False	AATAAA	-17	NA	42289212	42311943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42289540_42289865_42290023_42291971_42292062_42295618_42295794_42299750_42299882_42300129_42300282_42300714_42300871_42301274_42301455_42304341_42304430_42304529_42304653_42305609_42305703_42306240_42306448_42307401_42307497_42307592_42307724_42308177_42308334_42309046_42309099_42309376_42309485_42310506
transcript_86425.known	chr17	-	4912	25	FSM	ENSG00000168610.16	ENST00000678960.1	4912	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	160.93774136983	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTCTTTTTTTTTT	-42388363	False	NA	-28	True	NA	NA	NA	42388373	42313411	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42315801_42316788_42316902_42317181_42317225_42322281_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348540_42374058_42374207_42388278
transcript_86426.known	chr17	-	3319	24	FSM	ENSG00000168610.16	ENST00000585517.5	3319	24	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	144.080278504951	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAACTTCAGTTAACAGC	-42377170	True	NA	NA	False	NA	NA	NA	42388439	42314853	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42315801_42316788_42316852_42317181_42317225_42322281_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348521_42388278
transcript_86427.known	chr17	-	4782	24	FSM	ENSG00000168610.16	ENST00000679185.1	4782	24	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	140.186467773077	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACTGCATTCAAATTCCA	-42377234	True	NA	-87	True	NA	NA	NA	42388503	42313470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42315801_42316788_42316852_42317181_42317225_42322284_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348540_42388278
transcript_86428.known	chr17	-	2633	24	FSM	ENSG00000168610.16	ENST00000404395.3	2633	24	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_3	116.750505477709	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGTGATCTGCTTTTAT	-42377145	True	NA	-4	True	AATAGA	-13	NA	42388414	42315558	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42315801_42316788_42316902_42317181_42317225_42322284_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348518_42388278
transcript_86429.known	chr17	-	4890	24	FSM	ENSG00000168610.16	ENST00000679014.1	4890	24	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_3	103.265748168507	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTGAGGTTTTTTGTCT	-42377242	True	NA	-37	True	NA	NA	NA	42388511	42313420	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42315801_42316788_42316902_42317181_42317225_42322284_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348540_42388278
transcript_86434.known	chr17	-	4837	24	FSM	ENSG00000168610.16	ENST00000678043.1	4837	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	130.145142183742	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTGAGGTTTTTTGTCT	-42377207	True	NA	-37	True	NA	NA	NA	42388476	42313420	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42315801_42316788_42316902_42317181_42317225_42322281_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324826_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348540_42388278
transcript_86444.known	chr17	-	5054	23	FSM	ENSG00000168610.16	ENST00000678764.1	5054	23	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_22	69.7324283977543	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTGAGGTTTTTTGTCT	-42377185	True	NA	-37	True	NA	NA	NA	42388454	42313420	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42315801_42316788_42316902_42317181_42317225_42322281_42322495_42323003_42323144_42323259_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348540_42388278
transcript_86446.known	chr17	-	3314	23	FSM	ENSG00000168610.16	ENST00000677603.1	3314	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	143.608253866247	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGTTAACAGCCTCCTT	-42377208	True	NA	NA	False	AAAAAG	-4	NA	42388477	42314847	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42315801_42316788_42316852_42322284_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348518_42388278
transcript_86447.known	chr17	-	2615	23	FSM	ENSG00000168610.16	ENST00000389272.7	2615	23	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_22	122.492275013637	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGAAATGTCTTGTGT	-42377162	True	NA	87	True	NA	NA	NA	42388431	42315467	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42315801_42316788_42316902_42317181_42317225_42322281_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42388278
transcript_86449.known	chr17	-	4703	23	FSM	ENSG00000168610.16	ENST00000678674.1	4703	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	159.286042666738	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTGAGGTTTTTTGTCT	-42377173	True	NA	-37	True	NA	NA	NA	42388442	42313420	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42315801_42316788_42316902_42317181_42317225_42322284_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42345558_42345658_42346568_42346714_42348388_42348518_42388278
transcript_86458.known	chr17	-	3288	23	FSM	ENSG00000168610.16	ENST00000678535.1	3288	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	132.615870122186	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCTGGGCGACAGTCTGA	-42377215	True	NA	NA	False	NA	NA	NA	42388484	42314902	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42315801_42316788_42316852_42322284_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348540_42388278
transcript_86473.nnic	chr17	-	3485	3	NNC	ENSG00000177469.13	novel	3570	2	NA	NA	-80	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATCTGTGTTTGATTGTAT	-42421713	True	NA	-4	True	AATAAA	-16	NA	42423336	42402451	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_42404374_42404535_42405389_42422626
transcript_86474.nnic	chr17	-	2309	3	NNC	ENSG00000177469.13	novel	3570	2	NA	NA	-80	-1179	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAATAGGAGAAGGTGGA	-42421713	True	NA	NA	False	NA	NA	NA	42423336	42403627	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_42404374_42404535_42405389_42422626
transcript_86475.known	chr17	-	3570	2	FSM	ENSG00000177469.13	ENST00000357037.6	3570	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTTTGATTGTATTCT	-42421633	True	NA	-1	True	AATAAA	-19	NA	42423256	42402448	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42405389_42422626
transcript_86485.known	chr17	+	4110	21	FSM	ENSG00000033627.17	ENST00000264649.10	4110	21	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_5	45.7334669580166	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCTGTCACTGTGCCCA	42450806	True	NA	20	True	AATAAA	-24	NA	42458879	42522582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42458964_42460847_42461012_42466428_42466508_42468009_42468108_42470089_42470219_42477638_42477743_42478462_42478590_42480666_42480750_42483037_42483132_42487154_42487368_42490486_42490638_42494333_42494474_42495033_42495189_42495625_42495717_42498923_42499043_42500706_42500924_42501196_42501305_42507519_42507628_42513860_42513979_42514288_42514461_42521026
transcript_86488.known	chr17	+	3028	21	FSM	ENSG00000033627.17	ENST00000393829.6	3028	21	0	0	0	0	multi-exon	TRUE	canonical	3	172	junction_5	29.8690475241512	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTAGACTTTGAGTTCCCT	42450770	True	NA	NA	False	NA	NA	NA	42458843	42521485	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42458964_42460847_42461012_42466428_42466508_42468009_42468108_42470089_42470219_42477659_42477743_42478462_42478590_42480666_42480750_42483037_42483132_42487154_42487368_42490486_42490638_42494333_42494474_42495033_42495189_42495625_42495717_42498923_42499043_42500706_42500924_42501196_42501305_42507519_42507628_42513860_42513979_42514288_42514461_42521026
transcript_86494.nic	chr17	+	3948	20	NIC	ENSG00000033627.17	novel	3028	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_19	55.0552480006218	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGCTGCCTGTCACTGT	42450770	True	NA	15	True	AATAAA	-19	NA	42458843	42522577	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_42458964_42460847_42461012_42466428_42466508_42468009_42468108_42470089_42470219_42477659_42477743_42478462_42478590_42480666_42480750_42483037_42483132_42487154_42487368_42490486_42490638_42494333_42494474_42495033_42495189_42495625_42495717_42498923_42499043_42500706_42500924_42501196_42501305_42507519_42507628_42513860_42513979_42521026
transcript_86495.nnic	chr17	+	4013	20	NIC	ENSG00000033627.17	novel	3028	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_17	54.7472662138918	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCTGCCTGTCACTGTG	42450770	True	NA	16	True	AATAAA	-20	NA	42458843	42522578	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_42458964_42460847_42461012_42466428_42466508_42468009_42468108_42470089_42470219_42477659_42477743_42478462_42478590_42480666_42480750_42483037_42483132_42487154_42487368_42490486_42490638_42494333_42494474_42495033_42495189_42495625_42495717_42498923_42499043_42500706_42500924_42501196_42501305_42513860_42513979_42514288_42514461_42521026
transcript_86500.known	chr17	+	2774	20	FSM	ENSG00000033627.17	ENST00000537728.5	2774	20	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	58.8265679515039	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGTGAGCCAGTCTGCAT	42450804	True	NA	NA	False	NA	NA	NA	42458877	42521394	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42458964_42460847_42461012_42466428_42466508_42468009_42468108_42477659_42477743_42478462_42478590_42480666_42480750_42483037_42483132_42487154_42487368_42490486_42490638_42494333_42494474_42495033_42495189_42495625_42495717_42498923_42499043_42500706_42500924_42501196_42501305_42507519_42507628_42513860_42513979_42514288_42514461_42521026
transcript_86510.known	chr17	+	1797	5	FSM	ENSG00000033627.17	ENST00000588629.1	1797	5	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_4	15.204851199535	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGTGACTTGGTTGGGC	42450784	True	NA	NA	False	NA	NA	NA	42458857	42471439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42458964_42460847_42461012_42466428_42466508_42468009_42468108_42470089
transcript_86515.known	chr17	+	1976	11	FSM	ENSG00000068120.15	ENST00000590958.5	1976	11	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	170.094561935413	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGATGCTCACCCTGGTT	42555785	True	NA	NA	False	NA	NA	NA	42562150	42566037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42562220_42562355_42562488_42562611_42563323_42563960_42564176_42564445_42564578_42564708_42564899_42564982_42565048_42565226_42565312_42565470_42565569_42565658_42565806_42565905
transcript_86519.known	chr17	+	2071	10	FSM	ENSG00000068120.15	ENST00000421097.6	2071	10	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	136.185421891634	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGAATGTTCTGAGATGT	42555781	True	NA	0	True	NA	NA	NA	42562146	42566260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42562220_42562611_42563323_42563960_42564176_42564445_42564578_42564708_42564899_42564982_42565048_42565226_42565312_42565470_42565569_42565658_42565806_42565905
transcript_86524.nic	chr17	+	2413	10	NIC	ENSG00000068120.15	novel	1976	11	NA	NA	-59	0	intron_retention	FALSE	canonical	3	35	junction_1	143.796152011566	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTTGCTTGTATGGTGT	42555709	True	NA	14	True	ATTAAA	-14	NA	42562074	42566274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_42562220_42562355_42563323_42563960_42564176_42564445_42564578_42564708_42564899_42564982_42565048_42565226_42565312_42565470_42565569_42565658_42565806_42565905
transcript_86526.nic	chr17	+	2418	10	NIC	ENSG00000068120.15	novel	1976	11	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	3	91	junction_1	126.789803694886	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTTGCTTGTATGGTGT	42555716	True	NA	14	True	ATTAAA	-14	NA	42562081	42566274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_42562488_42562611_42563323_42563960_42564176_42564445_42564578_42564708_42564899_42564982_42565048_42565226_42565312_42565470_42565569_42565658_42565806_42565905
transcript_86562.known	chr17	+	2475	6	FSM	ENSG00000108784.10	ENST00000225927.7	2475	6	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	17.8594512793647	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGAGTCCCCTGGGTCT	42534578	True	NA	23	True	ATTAAA	-24	NA	42536240	42544449	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42536656_42537397_42537546_42538338_42538486_42538669_42538756_42540949_42541207_42543027
transcript_8658.nic	chr1	+	624	6	ISM	ENSG00000132780.17	ENST00000350030.8	3225	15	-40	11504	12	-106	5prime_fragment	FALSE	canonical	3	925	junction_5	126.362336160741	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAGACAAGTCTTTGGCA	45583981	True	NA	-34	True	AAAAAG	-16	NA	45584000	45607389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_45584206_45591222_45591271_45602254_45602366_45604935_45605017_45606481_45606592_45607320
transcript_86580.known	chr17	+	1493	4	FSM	ENSG00000108784.10	ENST00000591587.1	1493	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	75.19012937584	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCGAGGAGACACTGTGGAC	42534867	False	NA	NA	False	NA	NA	NA	42536529	42544161	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42536656_42538338_42538486_42538669_42538756_42543027
transcript_86585.known	chr17	-	2313	1	FSM	ENSG00000266962.2	ENST00000590513.2	2313	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTCCTGTCCTCTTTTC	-42552235	True	NA	-1	True	AAAACA	-18	NA	42554748	42552435	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42552400_42554700
transcript_86586.known	chr17	+	2479	9	FSM	ENSG00000068120.15	ENST00000393818.3	2479	9	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_2	36.8510515453766	1526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTGTATGGTGTCTG	42555782	True	NA	17	True	ATTAAA	-17	NA	42562147	42566277	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42563323_42563960_42564176_42564445_42564578_42564708_42564899_42564982_42565048_42565226_42565312_42565470_42565569_42565658_42565806_42565905
transcript_86588.known	chr17	+	2360	8	FSM	ENSG00000108788.12	ENST00000435881.7	2360	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	158.690817346827	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGGGCACTGCCTGTCA	42562599	True	NA	10	True	AATAAA	-23	NA	42567099	42573203	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42567167_42567618_42567656_42568469_42568560_42568836_42568944_42569203_42569304_42569506_42569607_42569981_42570184_42571546
transcript_86592.known	chr17	+	2586	8	FSM	ENSG00000108788.12	ENST00000246912.8	2586	8	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_1	88.3462575579169	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGGCTGATCTGGTGCCTG	42567060	False	NA	46	True	NA	NA	NA	42567071	42573239	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42567329_42567618_42567656_42568469_42568560_42568836_42568944_42569203_42569304_42569506_42569607_42569981_42570184_42571546
transcript_86596.known	chr17	-	1408	8	FSM	ENSG00000131470.15	ENST00000253789.9	1408	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	146.474626903538	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCAATATGTAGTGCTGT	NA	False	NA	-14	True	AATAAA	-4	NA	42577831	42572322	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42573025_42573106_42573167_42573310_42573365_42573477_42573588_42574098_42574211_42577212_42577303_42577460_42577562_42577652
transcript_86598.known	chr17	-	1355	8	FSM	ENSG00000131470.15	ENST00000393795.8	1355	8	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_7	67.1686880403453	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGTGTTATACCTGCCT	-42572221	True	NA	-1	True	AATAAA	-17	NA	42577729	42572309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42573025_42573106_42573167_42573310_42573365_42573477_42573624_42574098_42574211_42577212_42577303_42577460_42577562_42577652
transcript_86599.nic	chr17	-	1283	8	NIC	ENSG00000131470.15	novel	1355	8	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	80	junction_4	121.843492787649	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGTGTTATACCTGCCT	-42572246	True	NA	-1	True	AATAAA	-17	NA	42577754	42572309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_42573025_42573106_42573167_42573310_42573365_42573477_42573624_42574195_42574211_42577212_42577303_42577460_42577562_42577652
transcript_8660.nic	chr1	+	1572	6	ISM	ENSG00000132780.17	ENST00000350030.8	3225	15	-40	10556	12	365	5prime_fragment	FALSE	canonical	3	925	junction_5	126.362336160741	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACCGGGATATGCAAGAG	45583981	True	NA	34	True	AATGAA	-41	NA	45584000	45608337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_45584206_45591222_45591271_45602254_45602366_45604935_45605017_45606481_45606592_45607320
transcript_86604.known	chr17	+	2334	7	FSM	ENSG00000108788.12	ENST00000346833.8	2334	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	204.844181974712	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGGCTGATCTGGTGCCTG	42567060	False	NA	46	True	NA	NA	NA	42567071	42573239	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42567167_42567618_42567656_42568836_42568944_42569203_42569304_42569506_42569607_42569981_42570184_42571546
transcript_86611.nic	chr17	+	1955	7	NIC	ENSG00000108788.12	novel	2586	8	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_2	159.873561152417	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTTAGCATTGTTCCAA	42562578	True	NA	38	True	AATAAA	-15	NA	42567078	42572705	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_42567329_42567618_42567656_42568836_42568944_42569203_42569304_42569506_42569607_42569981_42570184_42571546
transcript_86612.known	chr17	-	1244	7	FSM	ENSG00000131470.15	ENST00000589505.5	1244	7	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_6	68.4876306755866	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGTCAGGACTGGTGGGG	NA	False	NA	NA	False	NA	NA	NA	42577795	42572961	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42573025_42573106_42573167_42573310_42573365_42573477_42574211_42577212_42577303_42577460_42577562_42577652
transcript_86619.known	chr17	+	2537	6	FSM	ENSG00000108788.12	ENST00000590050.5	2537	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	216.973178065861	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGGCTGATCTGGTGCCTG	42567060	False	NA	46	True	NA	NA	NA	42567071	42573239	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42567167_42567618_42567656_42568836_42568944_42569203_42569607_42569981_42570184_42571546
transcript_8662.known	chr1	+	604	5	FSM	ENSG00000132780.17	ENST00000464190.6	604	5	0	0	0	0	multi-exon	FALSE	canonical	3	1160	junction_3	48.1404196076436	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTCTCCTAAGATGCTT	45547889	True	NA	104	True	GGGGCT	-15	NA	45584040	45606680	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45584206_45591222_45591271_45602254_45602366_45604935_45605017_45606481
transcript_86633.known	chr17	+	542	1	FSM	ENSG00000287710.1	ENST00000655617.1	542	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGGTGGCGCGCTTCTGT	42577683	True	NA	6	True	AATAAA	-15	NA	42577824	42578366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42577800_42578400
transcript_86634.known	chr17	-	1381	7	FSM	ENSG00000131470.15	ENST00000587209.5	1381	7	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_4	43.1380213835647	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTATTTAGAAAAATAAAAAA	-42572189	True	NA	-34	True	NA	NA	NA	42577697	42572342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42573025_42573106_42573167_42573310_42573365_42573477_42573624_42574098_42574211_42577212_42577303_42577460
transcript_86635.known	chr17	+	1608	11	FSM	ENSG00000131462.9	ENST00000251413.8	1608	11	0	0	0	0	multi-exon	FALSE	canonical	3	1572	junction_8	94.0370139891734	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACTGCTCCCTTTAAAGC	42592261	True	NA	13	True	AATAAA	-19	NA	42609682	42615238	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42609787_42610107_42610221_42610422_42610591_42612074_42612144_42612426_42612507_42612946_42613074_42613646_42613734_42613848_42613999_42614259_42614413_42614495_42614658_42614843
transcript_86637.known	chr17	+	1719	10	FSM	ENSG00000131462.9	ENST00000681947.1	1719	10	0	0	0	0	multi-exon	FALSE	canonical	3	1572	junction_8	96.0417861733008	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATATAAATCAAGTCACT	42592219	True	NA	-1	True	AATAAA	-5	NA	42609640	42615224	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42609787_42610107_42610221_42610422_42610591_42612074_42612144_42612426_42612507_42612946_42613074_42613646_42613734_42613848_42613999_42614259_42614658_42614843
transcript_86638.known	chr17	+	1899	10	FSM	ENSG00000131462.9	ENST00000680678.1	1899	10	0	0	0	0	multi-exon	TRUE	canonical	3	1632	junction_7	77.5241897732572	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATAAATCAAGTCACTGC	42592219	True	NA	1	True	AATAAA	-7	NA	42609640	42615226	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42609787_42610107_42610221_42610422_42610591_42612074_42612144_42612426_42612507_42612946_42613074_42613646_42613734_42613848_42614413_42614495_42614658_42614843
transcript_8664.known	chr1	+	1036	5	FSM	ENSG00000132780.17	ENST00000470768.5	1036	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	512.087089761107	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCTGTAGAGGCTGGAT	45547909	True	NA	NA	False	NA	NA	NA	45584060	45607972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45584206_45591222_45591271_45604935_45605017_45606481_45606592_45607320
transcript_86646.known	chr17	+	1980	9	FSM	ENSG00000131462.9	ENST00000681490.1	1980	9	0	0	0	0	multi-exon	FALSE	canonical	3	1632	junction_7	75.093275331417	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATATAAATCAAGTCACT	42592219	True	NA	-1	True	AATAAA	-5	NA	42609640	42615224	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42609787_42610107_42610221_42610422_42610591_42612074_42612144_42612426_42612507_42612946_42613074_42613646_42613734_42613848_42614658_42614843
transcript_86649.known	chr17	-	3749	9	FSM	ENSG00000141699.11	ENST00000309428.10	3749	9	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_6	17.4839211849059	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAAGAGACTGATGCTG	-42604951	True	NA	-10	True	AATAAA	-17	NA	42609374	42579514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42582271_42582673_42582807_42583497_42583581_42585124_42585263_42586052_42586138_42586764_42586892_42587833_42587865_42592055_42592163_42609085
transcript_86651.known	chr17	-	1632	8	FSM	ENSG00000141699.11	ENST00000586870.5	1632	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_6	60.3618341372109	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACTGAAGTGAGAGTGTG	-42604963	True	NA	NA	False	NA	NA	NA	42609386	42581612	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42582271_42582673_42582807_42583497_42583581_42585124_42585263_42586052_42586138_42586764_42586892_42592055_42592163_42609085
transcript_86660.known	chr17	+	1782	11	FSM	ENSG00000037042.9	ENST00000251412.8	1782	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	157.989113549004	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGGCTTGATCTGTGAA	42656197	True	NA	14	True	AATAAA	-26	NA	42659283	42667006	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42659553_42659833_42659947_42660148_42660317_42660638_42660708_42662972_42663053_42663376_42663504_42665475_42665563_42665677_42665828_42666086_42666240_42666322_42666485_42666602
transcript_86670.nic	chr17	+	2424	4	ISM	ENSG00000037042.9	ENST00000251412.8	1782	11	-56	4550	-56	1065	5prime_fragment	FALSE	canonical	3	173	junction_1	151.182009511714	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCAGGCGTGGTGGTAC	NA	False	NA	NA	False	AATAAA	-5	NA	42659227	42662456	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_42659553_42659833_42659947_42660148_42660317_42660638
transcript_86672.nic	chr17	+	2470	4	NIC	ENSG00000037042.9	novel	1782	11	NA	NA	-56	1065	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	213.988057818395	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCAGGCGTGGTGGTAC	NA	False	NA	NA	False	AATAAA	-5	NA	42659227	42662456	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_42659553_42659833_42659947_42660148_42660363_42660638
transcript_86681.nnic	chr17	-	2779	13	NNC	ENSG00000068137.15	novel	3026	13	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	40.82448883806	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTCCTGTGGGAGTGTTA	-42676548	True	NA	44	True	AAAAAG	-18	NA	42676999	42667913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_42668304_42669429_42669622_42669917_42670125_42670572_42670706_42670993_42671131_42671350_42671559_42672085_42672393_42673175_42673297_42673398_42673557_42673642_42673835_42673933_42674014_42674353_42674410_42676401
transcript_86683.nnic	chr17	-	2850	13	NNC	ENSG00000068137.15	novel	3026	13	NA	NA	-85	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	44.270632352485	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTCCTGTGGGAGTGTTA	-42677068	False	NA	44	True	AAAAAG	-18	NA	42677079	42667913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_42668304_42669429_42669622_42669917_42670125_42670572_42670706_42671002_42671131_42671350_42671559_42672085_42672393_42673175_42673297_42673398_42673557_42673642_42673835_42673933_42674014_42674353_42674410_42676401
transcript_86685.known	chr17	-	3026	13	FSM	ENSG00000068137.15	ENST00000591022.6	3026	13	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_4	28.0431215571068	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTCCTGTGGGAGTGTTA	-42676543	True	NA	44	True	AAAAAG	-18	NA	42676994	42667913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42668304_42669429_42669622_42669917_42670377_42670572_42670706_42670993_42671131_42671350_42671559_42672085_42672393_42673175_42673297_42673398_42673557_42673642_42673835_42673933_42674014_42674353_42674410_42676401
transcript_86688.known	chr17	-	2987	13	FSM	ENSG00000068137.15	ENST00000293349.10	2987	13	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	34.154876014349	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGTTTCTTA	-42676543	True	NA	14	True	NA	NA	NA	42676994	42667943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42668304_42669429_42669622_42669917_42670377_42670572_42670706_42671002_42671131_42671350_42671559_42672085_42672393_42673175_42673297_42673398_42673557_42673642_42673835_42673933_42674014_42674353_42674410_42676401
transcript_86690.known	chr17	-	2640	13	FSM	ENSG00000068137.15	ENST00000591196.5	2640	13	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	36.7238190945453	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTCCTGTGGGAGTGTTA	-42676622	False	NA	44	True	AAAAAG	-18	NA	42676633	42667913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42668304_42669429_42669622_42669942_42670377_42670572_42670706_42670993_42671131_42671350_42671559_42672085_42672393_42673175_42673297_42673398_42673557_42673642_42673835_42673933_42674014_42674353_42674410_42676401
transcript_86706.known	chr17	+	5537	24	FSM	ENSG00000108797.12	ENST00000264638.9	5537	24	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	4.40097944073898	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTGTGGTAGCTGGC	42682121	True	NA	29	True	AATAAA	-20	NA	42682530	42699993	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42682897_42683820_42683923_42684035_42684230_42684990_42685139_42685216_42685421_42685956_42686142_42686902_42687047_42687719_42687982_42688461_42688612_42688875_42689048_42689520_42689628_42690087_42690208_42690738_42690943_42691136_42691294_42691383_42691512_42691805_42691992_42692498_42692721_42693296_42693537_42695520_42695875_42696024_42696153_42697273_42697368_42697553_42697800_42697902_42697951_42698617
transcript_86709.known	chr17	-	1773	2	FSM	ENSG00000184451.5	ENST00000332438.4	1773	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGTTGAAGTTTTTCCA	-42681811	True	NA	-4	True	AAGAAA	-24	NA	42681843	42678888	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42680618_42681799
transcript_86710.known	chr17	-	1942	2	FSM	ENSG00000184451.5	ENST00000591765.1	1942	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGATGCAACCCAACAACT	-42683053	True	NA	-26	True	ATTAAA	-16	NA	42683064	42679419	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42680618_42682320
transcript_86711.known	chr17	-	4633	21	FSM	ENSG00000108799.13	ENST00000428826.7	4633	21	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_20	9.15478017212866	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGCAAGTTGTGTACTG	-42743459	True	NA	-7	True	AATAAA	-14	NA	42745040	42700274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42702593_42702876_42702962_42703739_42703821_42704601_42704684_42705087_42705184_42706006_42706186_42707957_42708084_42708875_42708917_42709845_42709938_42712288_42712486_42713208_42713390_42717975_42718068_42718453_42718618_42719104_42719208_42720272_42720450_42722794_42722916_42724304_42724425_42727634_42727764_42728824_42728953_42730827_42730919_42745010
transcript_86713.known	chr17	-	2394	20	FSM	ENSG00000108799.13	ENST00000585893.5	2394	20	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_16	11.3286340808812	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGAGGGCACAAAACTGT	-42743450	True	NA	NA	False	NA	NA	NA	42745031	42702384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42702593_42702876_42702962_42703739_42703821_42704601_42704684_42705087_42705184_42706006_42706186_42707957_42708084_42708875_42708917_42709845_42709938_42712288_42712486_42713208_42713390_42717975_42718068_42718453_42718618_42719104_42719208_42720272_42720450_42722794_42722916_42727634_42727764_42728824_42728953_42730827_42730919_42745010
transcript_86717.known	chr17	-	2752	19	FSM	ENSG00000108799.13	ENST00000586103.5	2752	19	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_18	8.7700387825205	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	-42743434	True	NA	NA	False	NA	NA	NA	42745015	42703192	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42703821_42704601_42704684_42705087_42705184_42706006_42706186_42707957_42708084_42708875_42708917_42709845_42709938_42712288_42712486_42713208_42713390_42717975_42718068_42718453_42718618_42719104_42719208_42720272_42720450_42722794_42722916_42724304_42724425_42727634_42727764_42728824_42728953_42730827_42730919_42745010
transcript_86721.nic	chr17	-	1666	13	ISM	ENSG00000108799.13	ENST00000586103.5	2752	19	-72	6659	-38	-1807	5prime_fragment	FALSE	canonical	3	21	junction_12	10.2252411001186	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAGGCAAGAAGGGTTGG	NA	False	NA	NA	False	AAGAAA	-6	NA	42745087	42709851	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_42709938_42712288_42712486_42713208_42713390_42717975_42718068_42718453_42718618_42719104_42719208_42720272_42720450_42722794_42722916_42724304_42724425_42727634_42727764_42728824_42728953_42730827_42730919_42745010
transcript_86727.known	chr17	+	858	4	FSM	ENSG00000131477.11	ENST00000589683.5	858	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	56.6647058484282	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTCTCCCCATTTCAG	42760763	False	NA	8	True	AATAAA	-18	NA	42760774	42763041	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42761013_42761833_42761900_42762354_42762464_42762596
transcript_86728.known	chr17	+	548	4	FSM	ENSG00000131477.11	ENST00000588928.1	548	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	66.9842435867487	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCACTTTGCCAACTGCT	42760618	False	NA	NA	False	NA	NA	NA	42760804	42762698	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42761076_42761833_42761900_42762354_42762464_42762596
transcript_86729.known	chr17	+	752	4	FSM	ENSG00000131477.11	ENST00000253796.10	752	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	21.4009345590327	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTCTCCCCATTTCAG	42761179	False	NA	8	True	AATAAA	-18	NA	42761226	42763041	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42761359_42761833_42761900_42762354_42762464_42762596
transcript_86732.known	chr17	+	573	3	FSM	ENSG00000131477.11	ENST00000588576.1	573	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	49.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCTGTAATCTTCAAAATA	42761210	False	NA	-31	True	NA	NA	NA	42761257	42763002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42761359_42761833_42761900_42762596
transcript_86733.known	chr17	-	2117	3	FSM	ENSG00000197291.9	ENST00000587694.5	2117	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	-42761062	False	NA	NA	False	NA	NA	NA	42761117	42753930	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42755214_42759738_42759881_42760425
transcript_86737.known	chr17	+	1088	6	FSM	ENSG00000131475.7	ENST00000253794.7	1088	6	0	0	0	0	multi-exon	FALSE	canonical	3	1167	junction_4	61.4576276795647	679	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCTGCCTCTTAAATTAC	42763844	True	NA	13	True	ATTAAA	-14	NA	42773448	42779599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42773529_42773732_42773879_42774645_42774700_42775380_42775470_42776244_42776321_42778956
transcript_86742.known	chr17	-	780	2	FSM	ENSG00000183978.8	ENST00000328434.8	780	2	0	0	0	0	multi-exon	FALSE	canonical	3	1431	junction_1	0	403	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGAGGCTGAGAGGCAG	-42785819	True	NA	1	True	AATAAA	-28	NA	42798704	42797624	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42798168_42798467
transcript_86744.known	chr17	+	4199	19	FSM	ENSG00000126562.17	ENST00000246914.10	4199	19	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.57134840263677	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCGTGAATCCATATGCCA	42780564	True	NA	NA	False	AATAAA	-18	NA	42780609	42797066	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42781317_42782757_42782931_42783936_42784158_42784421_42784580_42785096_42785186_42785265_42785483_42787277_42787543_42787777_42787900_42788129_42788189_42788289_42788408_42788680_42788798_42793591_42793730_42794613_42794669_42794771_42795383_42795460_42795522_42795624_42796034_42796122_42796323_42796480_42796579_42796685
transcript_8676.known	chr1	-	3641	13	FSM	ENSG00000159592.11	ENST00000355105.8	3641	13	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_12	149.150068908987	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTTTTTTTTCCTGAAA	-45678241	True	NA	-17	True	AATAAA	-27	NA	45686533	45627303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45628409_45629575_45629679_45630481_45630607_45633488_45633648_45634095_45634237_45640209_45640404_45642426_45642500_45654542_45654830_45655189_45655320_45659027_45659143_45660183_45661226_45685575_45685621_45686411
transcript_86769.known	chr17	-	2112	12	FSM	ENSG00000126581.13	ENST00000361523.8	2112	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	152.474791304894	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGGGTGCACTGTTGGG	-42817822	True	NA	-13	True	AATAAA	-25	NA	42824263	42810133	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42810929_42811654_42811798_42813947_42814009_42814523_42814674_42815907_42816055_42818220_42818416_42818543_42818681_42818786_42818878_42819547_42819610_42820773_42820842_42823747_42823880_42824132
transcript_86770.known	chr17	-	2109	12	FSM	ENSG00000126581.13	ENST00000590099.6	2109	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	147.637931026163	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGGGTGCACTGTTGGG	-42817841	True	NA	-13	True	AATAAA	-25	NA	42824282	42810133	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42810929_42811654_42811798_42813947_42814009_42814523_42814674_42815907_42816055_42818220_42818416_42818543_42818681_42818786_42818878_42819547_42819610_42820773_42820842_42823747_42823880_42824154
transcript_86780.known	chr17	+	3144	11	FSM	ENSG00000131467.12	ENST00000293362.7	3144	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	449.080404827465	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTAGCCTTCTGGTTTCC	42814208	True	NA	9	True	AATAAA	-22	NA	42833470	42843757	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42833674_42834343_42834377_42834514_42834578_42834771_42834877_42837648_42837698_42838092_42838206_42838691_42838800_42838944_42839013_42839111_42839167_42839293_42839381_42841497
transcript_86782.known	chr17	+	3182	11	FSM	ENSG00000131467.12	ENST00000590720.6	3182	11	0	0	0	0	multi-exon	FALSE	canonical	3	1323	junction_6	98.3850090206836	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCCTTCTGGTTTCCAAT	42814134	True	NA	12	True	AATAAA	-25	NA	42833396	42843760	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42833674_42834343_42834377_42834514_42834578_42834771_42834877_42837648_42837698_42838092_42838206_42838730_42838800_42838944_42839013_42839111_42839167_42839293_42839381_42841497
transcript_86794.known	chr17	-	2504	11	FSM	ENSG00000126581.13	ENST00000543382.6	2504	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	154.312831611632	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGCACTTAACAATATGAA	-42817846	True	NA	NA	False	NA	NA	NA	42824287	42810413	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42810929_42811654_42811798_42813947_42814009_42814523_42814674_42815907_42816055_42818220_42818416_42818543_42818681_42818786_42819610_42820773_42820842_42823747_42823880_42824154
transcript_86808.known	chr17	+	3366	10	FSM	ENSG00000131467.12	ENST00000541124.5	3366	10	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_6	474.437210457471	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAGCCTTCTGGTTTCCA	42833070	True	NA	10	True	AATAAA	-23	NA	42833141	42843758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42833674_42834343_42834377_42834514_42834578_42834771_42834877_42837648_42837698_42838092_42838206_42838944_42839013_42839111_42839167_42839293_42839381_42841497
transcript_86809.known	chr17	+	956	10	FSM	ENSG00000131467.12	ENST00000543428.5	956	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	469.890294525104	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAGTTAGAGTCTAATG	42814182	True	NA	-14	True	NA	NA	NA	42833444	42841695	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42833674_42834343_42834377_42834514_42834578_42834771_42834877_42837648_42837698_42838730_42838800_42838944_42839013_42839111_42839167_42839293_42839381_42841497
transcript_86829.known	chr17	+	826	9	FSM	ENSG00000131467.12	ENST00000592169.2	826	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	488.381190772126	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATAGTAATCACACCTC	42814233	True	NA	-38	True	NA	NA	NA	42833495	42841671	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42833674_42834343_42834377_42837648_42837698_42838092_42838206_42838730_42838800_42838944_42839013_42839111_42839167_42839293_42839381_42841497
transcript_8684.nic	chr1	-	3447	13	NIC	ENSG00000159592.11	novel	3641	13	NA	NA	24	-189	combination_of_known_junctions	FALSE	canonical	3	58	junction_12	204.273560452644	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTGTCTTGTGTAAGA	-45684665	True	NA	-41	True	AATAAA	-15	NA	45687109	45627492	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_45628409_45629575_45629679_45630481_45630607_45633488_45633648_45634095_45634237_45640209_45640404_45642426_45642500_45654542_45654830_45655189_45655320_45659027_45659143_45660183_45661226_45685575_45685621_45686992
transcript_86844.known	chr17	+	2677	4	FSM	ENSG00000131480.9	ENST00000253799.8	2677	4	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_1	32.8667342798493	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACTTGAATTTATTGTT	42844568	False	NA	4	True	AATAAA	-15	NA	42844579	42850707	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42846215_42849085_42849372_42849600_42849731_42850081
transcript_86846.known	chr17	-	2042	18	FSM	ENSG00000108825.18	ENST00000409399.6	2042	18	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_17	156.131499008685	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGGTTGCGCTACCACT	-42980410	True	NA	-16	True	AATAAA	-13	NA	42980490	42950529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42950729_42951799_42951895_42953723_42953779_42954875_42954968_42955157_42955225_42955841_42955973_42956203_42956321_42956403_42956561_42957137_42957196_42961191_42961352_42964105_42964238_42970288_42970343_42971606_42971697_42979169_42979269_42979377_42979445_42979549_42979664_42980045_42980276_42980365
transcript_86851.known	chr17	-	1790	17	FSM	ENSG00000108825.18	ENST00000360221.8	1790	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_16	153.156323326855	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGCGCTACCACTTGTA	-42979817	True	NA	-12	True	AATAAA	-17	NA	42980003	42950525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42950729_42951799_42951895_42953723_42953779_42954875_42954968_42955157_42955225_42955841_42955973_42956203_42956321_42956403_42956561_42957137_42957196_42961191_42961352_42964105_42964238_42970288_42970343_42971606_42971697_42979169_42979269_42979377_42979445_42979549_42979664_42979904
transcript_86852.known	chr17	-	2150	17	FSM	ENSG00000108825.18	ENST00000421990.7	2150	17	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_16	152.296175263859	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAATAAAATAGATTGACTC	-42980502	False	NA	-36	True	NA	NA	NA	42980528	42950549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42950729_42951799_42951895_42953723_42953779_42954875_42954968_42955157_42955225_42955841_42955973_42956203_42956321_42956403_42956561_42957137_42957196_42961191_42961352_42964105_42964238_42970288_42970343_42971606_42971697_42979169_42979269_42979377_42979445_42979549_42979664_42980045
transcript_86862.known	chr17	-	1320	12	FSM	ENSG00000266967.7	ENST00000427569.7	1320	12	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_11	34.5739117240272	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGCGCTACCACTTGTA	-42960876	True	NA	-12	True	AATAAA	-17	NA	42964454	42950525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42950729_42951799_42951895_42953723_42953779_42954875_42954968_42955157_42955225_42955841_42955973_42956203_42956321_42956403_42956561_42957137_42957196_42961191_42961352_42964105_42964238_42964401
transcript_86883.known	chr17	-	1543	7	FSM	ENSG00000267060.7	ENST00000591916.7	1543	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	7.08088192874933	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTGCTCTTGAACTCAT	-42979894	True	NA	-13	True	AATAAA	-14	NA	42980080	42968102	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42969187_42970288_42970343_42971606_42971697_42979169_42979269_42979377_42979445_42979549_42979664_42980045
transcript_86884.known	chr17	-	983	6	FSM	ENSG00000266967.7	ENST00000441280.7	983	6	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_5	30.482782025268	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAGAAGTCATGGAACTG	-42960865	True	NA	NA	False	NA	NA	NA	42964443	42955886	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42956321_42956403_42956561_42957137_42957196_42961191_42961352_42964105_42964238_42964401
transcript_86887.known	chr17	-	1670	16	FSM	ENSG00000108825.18	ENST00000409103.5	1670	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_15	152.632397900606	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATAGATTGACTCAGAA	-42979807	True	NA	-32	True	NA	NA	NA	42979993	42950545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_42950729_42951799_42951895_42953723_42953779_42954875_42954968_42955157_42955225_42955841_42955973_42956203_42956321_42956403_42956561_42957137_42957196_42961191_42961352_42964105_42964238_42970288_42970343_42979169_42979269_42979377_42979445_42979549_42979664_42979904
transcript_86890.known	chr17	+	3828	5	FSM	ENSG00000198863.8	ENST00000361677.6	5280	5	0	1452	0	-1452	multi-exon	FALSE	canonical	3	76	junction_4	7.82224392358101	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTATCCTCTGTCCTCTG	42978362	True	NA	29	True	NA	NA	NA	42980564	42993690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42981075_42987255_42987415_42989340_42989540_42990316_42990437_42990850
transcript_86892.known	chr17	+	959	4	FSM	ENSG00000198863.8	ENST00000589705.1	959	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	37.2767428238514	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGGACAGAGTGAAGCAG	42978378	True	NA	NA	False	NA	NA	NA	42980580	42991036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42981075_42987255_42987415_42990316_42990437_42990850
transcript_86894.known	chr17	+	585	5	FSM	ENSG00000131469.15	ENST00000589037.5	585	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	5455.2643382333	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAAAAGCCTGTGTCT	42998198	True	NA	53	True	ATTAAA	-8	NA	42998272	43002949	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42998416_42998748_42998832_42999932_43000103_43002672_43002784_43002871
transcript_86895.known	chr17	+	505	5	FSM	ENSG00000131469.15	ENST00000253788.12	505	5	0	0	0	0	multi-exon	FALSE	canonical	3	7329	junction_1	2490.62265056351	2959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTCTGCATGCTGTA	42913290	True	NA	63	True	ATTAAA	-18	NA	42998418	43002959	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42998472_42998748_42998832_42999932_43000103_43002672_43002784_43002871
transcript_86901.known	chr17	+	318	4	FSM	ENSG00000131469.15	ENST00000588830.1	318	4	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_2	4315.96990515715	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTCTGCATGCTGTA	42913307	True	NA	63	True	ATTAAA	-18	NA	42998435	43002959	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42998472_42998748_42998832_43002672_43002784_43002871
transcript_86905.known	chr17	+	730	4	FSM	ENSG00000131469.15	ENST00000589913.6	730	4	0	0	0	0	multi-exon	FALSE	canonical	3	10738	junction_3	1362.85680343412	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTCTGCATGCTGTA	42913342	True	NA	63	True	ATTAAA	-18	NA	42998470	43002959	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_42998832_42999932_43000103_43002672_43002784_43002871
transcript_86906.known	chr17	+	1182	7	FSM	ENSG00000068079.8	ENST00000415816.7	1182	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	5.01386965216377	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTTCTTCCTCATTTCA	43006652	False	NA	5	True	AGTAAA	-17	NA	43006783	43014456	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_43006969_43012178_43012278_43013046_43013195_43013266_43013374_43013475_43013663_43013775_43013883_43014107
transcript_86907.known	chr17	+	1232	7	FSM	ENSG00000068079.8	ENST00000438323.2	1232	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	4.74926894959167	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTTCTTCCTCATTTCA	43006608	True	NA	5	True	AGTAAA	-17	NA	43006739	43014456	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_43006969_43012178_43012278_43013046_43013195_43013266_43013380_43013475_43013663_43013775_43013883_43014107
transcript_8691.known	chr1	-	3599	12	FSM	ENSG00000159592.11	ENST00000290795.7	3599	12	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_11	141.076381632595	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTTTTTTTTCCTGAAA	-45678244	True	NA	-17	True	AATAAA	-27	NA	45686536	45627303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45628409_45629575_45629679_45630481_45630607_45633488_45633648_45634095_45634237_45640209_45640404_45642426_45642500_45654542_45654830_45655189_45655320_45659027_45659143_45660183_45661226_45686411
transcript_86911.known	chr17	-	2699	6	FSM	ENSG00000108828.16	ENST00000355653.8	2699	6	0	0	0	0	multi-exon	TRUE	canonical	3	1291	junction_5	72.9421688737043	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCCTGCTTGTTGCCTCTG	-43010759	True	NA	-20	True	AATAAA	-14	NA	43022385	43014606	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_43016145_43016306_43016549_43017840_43017931_43018035_43018207_43018591_43018800_43021935
transcript_86912.known	chr17	-	1174	6	FSM	ENSG00000108828.16	ENST00000587173.5	1174	6	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_5	542.170231569384	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGACCTCTGAAGAGGTTG	-43010730	True	NA	NA	False	NA	NA	NA	43022356	43015898	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_43016145_43016306_43016549_43017840_43017931_43018035_43018207_43018591_43018800_43022139
transcript_8692.nic	chr1	-	3624	12	NIC	ENSG00000159592.11	novel	3599	12	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	145	junction_11	175.945803075364	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTTTTTTTTCCTGAAA	-45687124	False	NA	-17	True	AATAAA	-27	NA	45687142	45627303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_45628409_45629575_45629679_45630481_45630607_45633488_45633648_45634095_45634237_45640209_45640404_45642426_45642500_45654542_45654830_45655189_45655320_45659027_45659143_45660183_45661226_45686992
transcript_86921.nnic	chr17	+	775	6	NNC	ENSG00000108830.10	novel	4162	5	NA	NA	241	-2813	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_5	338.63750530619	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGTGGCTTTAGTTTTG	43025314	True	NA	27	True	AATAAA	-19	NA	43025481	43029228	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_43025540_43025959_43026048_43027182_43027293_43028060_43028196_43028431_43028677_43029089
transcript_86923.known	chr17	+	4162	5	FSM	ENSG00000108830.10	ENST00000587250.4	4162	5	0	0	0	0	multi-exon	TRUE	canonical	3	537	junction_1	102.637712367336	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGCCAGAGTTTCTGTG	43020607	True	NA	12	True	AATAAA	-19	NA	43025230	43032041	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_43025450_43025959_43026048_43027182_43027293_43028060_43028196_43028431
transcript_86925.nnic	chr17	+	1188	5	NNC	ENSG00000108830.10	novel	4162	5	NA	NA	241	-2813	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_1	295.146044357704	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGTGGCTTTAGTTTTG	43025314	True	NA	27	True	AATAAA	-19	NA	43025481	43029228	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_43025540_43025959_43026048_43027182_43027293_43028060_43028196_43028431
transcript_86926.nnic	chr17	+	1888	5	NNC	ENSG00000108830.10	novel	4162	5	NA	NA	241	-2113	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_1	295.146044357704	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGCATCAAAAGCCTCCA	43025314	True	NA	NA	False	NA	NA	NA	43025481	43029928	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_43025540_43025959_43026048_43027182_43027293_43028060_43028196_43028431
transcript_86934.known	chr17	-	2379	23	FSM	ENSG00000012048.23	ENST00000491747.6	2379	23	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_13	22.9440570097382	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAGCCAGCCACAGGTAC	-43122637	True	NA	NA	False	NA	NA	NA	43125356	43045677	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_43045803_43047642_43047704_43049120_43049195_43051062_43051118_43057051_43057136_43063332_43063374_43063873_43063952_43067607_43067696_43070927_43071239_43074330_43074522_43076487_43076612_43082403_43082576_43090943_43091033_43094743_43094861_43095845_43095923_43097243_43097290_43099774_43099881_43104121_43104262_43104867_43104957_43106455_43106534_43115725_43115780_43124016_43124116_43125276
transcript_86938.known	chr17	-	7088	23	FSM	ENSG00000012048.23	ENST00000357654.9	7088	23	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_22	19.541067160857	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGAATGACTGTTCTTGA	-43122645	True	NA	-5	True	AATAAA	-21	NA	43125364	43044294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_43045803_43047642_43047704_43049120_43049195_43051062_43051118_43057051_43057136_43063332_43063374_43063873_43063952_43067607_43067696_43070927_43071239_43074330_43074522_43076487_43076615_43082403_43082576_43090943_43091033_43091434_43094861_43095845_43095923_43097243_43097290_43099774_43099881_43104121_43104262_43104867_43104957_43106455_43106534_43115725_43115780_43124016_43124116_43125270
transcript_86940.known	chr17	-	4497	10	FSM	ENSG00000012048.23	ENST00000354071.7	4497	10	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_9	16.4166431659918	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACAGCAAGTTGCAGCGT	-43125240	False	NA	NA	False	AGTAAA	-27	NA	43125315	43091097	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_43094861_43095845_43095923_43097243_43097290_43099774_43099881_43104121_43104262_43104867_43104957_43106455_43106534_43115725_43115780_43124016_43124116_43125270
transcript_86943.known	chr17	-	2108	10	FSM	ENSG00000012048.23	ENST00000470026.5	2108	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	22.7303028283098	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAGAAAAAAAAGTACAA	-43122604	True	NA	NA	False	NA	NA	NA	43125323	43093583	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_43094861_43095845_43095923_43097243_43097290_43099774_43099881_43104121_43104262_43104867_43104957_43106455_43106534_43115725_43115780_43124016_43124116_43125181
transcript_86945.known	chr17	-	1612	10	FSM	ENSG00000012048.23	ENST00000494123.5	1612	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_9	16.629588385662	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGCCATGTAACTGAAAA	-43125375	False	NA	NA	False	NA	NA	NA	43125450	43094111	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_43094861_43095845_43095923_43097243_43097290_43099774_43099881_43104121_43104262_43104867_43104957_43106455_43106534_43115725_43115780_43124016_43124116_43125276
transcript_86956.known	chr17	-	7270	24	FSM	ENSG00000012048.23	ENST00000471181.7	7270	24	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_12	27.2376643486229	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGAATGACTGTTCTTGA	-43125408	True	NA	-5	True	AATAAA	-21	NA	43125483	43044294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_43045803_43047642_43047704_43049120_43049195_43051062_43051118_43057051_43057136_43063332_43063374_43063873_43063952_43067607_43067696_43070927_43071239_43074330_43074522_43076487_43076612_43079333_43079400_43082403_43082576_43090943_43091033_43091434_43094861_43095845_43095923_43097243_43097290_43099774_43099881_43104121_43104262_43104867_43104957_43106455_43106534_43115725_43115780_43124016_43124116_43125270
transcript_86962.known	chr17	+	4613	21	FSM	ENSG00000188554.15	ENST00000590996.6	4613	21	0	0	0	0	multi-exon	TRUE	canonical	3	139	junction_11	20.9666401695646	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGGACTGGCTAGTCCTTG	43167003	True	NA	15	True	AATAAA	-19	NA	43171213	43211688	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_43171303_43175790_43175902_43177935_43177999_43179393_43179413_43180794_43180818_43186249_43186445_43189041_43189120_43189587_43189803_43190608_43190777_43191371_43191582_43193093_43193254_43193347_43193639_43194349_43194500_43194963_43195040_43196480_43196592_43196941_43197107_43200166_43200609_43201685_43201781_43202654_43202713_43203680_43203787_43209900
transcript_8698.nic	chr1	-	3435	12	NIC	ENSG00000159592.11	novel	3599	12	NA	NA	4	-189	combination_of_known_junctions	FALSE	canonical	3	145	junction_11	175.945803075364	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTGTCTTGTGTAAGA	-45687124	False	NA	-41	True	AATAAA	-15	NA	45687142	45627492	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_45628409_45629575_45629679_45630481_45630607_45633488_45633648_45634095_45634237_45640209_45640404_45642426_45642500_45654542_45654830_45655189_45655320_45659027_45659143_45660183_45661226_45686992
transcript_86982.nic	chr17	+	2749	17	ISM	ENSG00000188554.15	ENST00000589872.1	3097	21	-54	9091	-13	4646	5prime_fragment	FALSE	canonical	3	139	junction_11	23.4053112295052	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGATTCTGGATTTAA	43166978	True	NA	5	True	AATAAA	-18	NA	43171188	43200766	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_43171303_43175790_43175902_43177935_43177999_43179393_43179413_43180794_43180818_43186249_43186445_43189041_43189120_43189587_43189803_43190608_43190777_43191371_43191582_43193093_43193254_43193347_43193639_43194349_43194500_43194963_43195040_43196480_43196592_43196941_43197107_43200166
transcript_86995.known	chr17	-	1427	4	FSM	ENSG00000188825.15	ENST00000658683.1	1427	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.94392028877595	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTTTGTTTTTCTTTTT	NA	False	NA	NA	False	GATAAA	-1	NA	43388339	43376963	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_43377814_43379122_43379263_43381272_43381661_43388290
transcript_86998.known	chr17	+	1578	2	FSM	ENSG00000175906.5	ENST00000320033.5	1578	2	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGATCTCTGTAGTTTT	43398403	True	NA	4	True	NA	NA	NA	43398992	43401137	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_43399094_43399660
transcript_87.known	SIRV2	-	1971	11	FSM	SIRV2A	SIRV202	1971	11	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_6	1140.72846900566	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGCTCTATAGCTGTATC	NA	False	NA	NA	False	NA	NA	NA	5911	1035	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV2_-_1662_1741_1854_1973_2065_2674_2803_2881_3011_3105_3326_3665_3826_3966_4095_4338_4480_4687_4801_5788
transcript_87001.known	chr17	+	5549	23	FSM	ENSG00000067596.12	ENST00000262415.8	5549	23	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_5	19.5824174804891	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCCTAGGCTGGCATCA	43479187	True	NA	NA	False	NA	NA	NA	43483974	43525670	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_43484186_43489448_43489535_43490390_43490464_43491164_43491251_43492182_43492293_43492680_43493041_43493444_43493590_43493682_43493887_43496180_43496269_43498861_43498960_43499955_43500104_43504643_43504826_43507002_43507198_43507502_43507689_43507808_43508020_43508338_43508521_43513361_43513503_43517166_43517323_43520129_43520268_43520750_43520880_43521368_43521566_43522046_43522227_43523627
transcript_87005.known	chr17	+	3809	23	FSM	ENSG00000067596.12	ENST00000540306.5	3809	23	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_22	42.3445138269371	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCTGTTTTTAAAATTT	43479175	True	NA	9	True	ATTAAA	-13	NA	43483962	43526786	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_43484186_43489448_43489535_43490390_43490464_43491164_43491251_43492182_43492293_43492680_43493041_43493444_43493590_43493682_43493887_43496180_43496269_43498861_43498960_43499955_43500104_43504643_43504826_43507002_43507198_43507502_43507689_43507808_43508020_43508338_43508521_43513361_43513503_43517166_43517323_43520129_43520268_43520750_43520880_43521368_43521566_43522046_43522227_43526495
transcript_87016.known	chr17	+	235	3	FSM	ENSG00000067596.12	ENST00000605777.1	235	3	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_2	2	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGAATGGTGTAGGTTTTG	43479352	False	NA	NA	False	NA	NA	NA	43484139	43490493	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_43484186_43489448_43489535_43490390
transcript_87019.known	chr17	-	1727	13	FSM	ENSG00000175832.13	ENST00000591713.5	1727	13	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_12	309.745986881007	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAAATGGCAAGTCTAGA	-43545863	False	NA	NA	False	NA	NA	NA	43545899	43528336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_43528744_43529134_43529237_43529503_43529677_43529883_43529953_43530106_43530182_43532673_43532940_43533186_43533349_43533858_43533986_43536425_43536480_43544974_43545023_43545273_43545368_43545557_43545669_43545860
transcript_87020.known	chr17	-	2335	13	FSM	ENSG00000175832.13	ENST00000319349.10	2335	13	0	0	0	0	multi-exon	FALSE	canonical	3	500	junction_12	211.949614033357	897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTTCTCCTGTGTCCTCT	-43540466	True	NA	-6	True	AATAAA	-18	NA	43546340	43527845	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_43528744_43529134_43529237_43529503_43529677_43529883_43529953_43530106_43530182_43532673_43532940_43533186_43533349_43533858_43533986_43536425_43536480_43544974_43545023_43545273_43545368_43545557_43545669_43546184
transcript_87026.known	chr17	-	1775	12	FSM	ENSG00000175832.13	ENST00000545954.5	1775	12	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_11	318.747912000939	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAATTCAGCTCAGCTTCT	-43540449	True	NA	NA	False	NA	NA	NA	43546323	43528277	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_43528744_43529134_43529237_43529503_43529677_43529883_43529953_43530106_43530182_43532673_43532940_43533186_43533349_43533858_43533986_43536425_43536480_43544974_43545023_43545273_43545368_43546184
transcript_87029.nic	chr17	-	2268	12	NIC	ENSG00000175832.13	novel	2335	13	NA	NA	-95	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_6	360.733046141482	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTTCTCCTGTGTCCTCT	NA	False	NA	-6	True	AATAAA	-18	NA	43546435	43527845	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_43528744_43529134_43529237_43529503_43529677_43529883_43529953_43530106_43530182_43532673_43532940_43533858_43533986_43536425_43536480_43544974_43545023_43545273_43545368_43545557_43545669_43546184
transcript_87043.nnic	chr17	-	2134	10	NIC	ENSG00000175832.13	novel	2182	12	NA	NA	-79	0	combination_of_known_splicesites	TRUE	canonical	3	55	junction_9	353.683404497983	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTTCTCCTGTGTCCTCT	-43545445	False	NA	-6	True	AATAAA	-18	NA	43545481	43527845	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_43528744_43529134_43529237_43529503_43529677_43529883_43529953_43530106_43530182_43532673_43532940_43533186_43533349_43533858_43533986_43536425_43536480_43545273
transcript_87049.known	chr17	-	2147	12	FSM	ENSG00000175832.13	ENST00000538265.5	2147	12	0	0	0	0	multi-exon	TRUE	canonical	1	12	junction_11	331.921677508415	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTCCTGTGTCCTCTTT	-43545901	False	NA	-4	True	AATAAA	-20	NA	43545937	43527843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_43528744_43529134_43529237_43529503_43529677_43529883_43529953_43530106_43530182_43532673_43532940_43533186_43533349_43533858_43533986_43536425_43536480_43544974_43545023_43545273_43545368_43545860
transcript_87050.known	chr17	-	2182	12	FSM	ENSG00000175832.13	ENST00000393664.6	2182	12	0	0	0	0	multi-exon	FALSE	canonical	3	746	junction_11	143.905961029537	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTTCTCCTGTGTCCTCT	-43545635	False	NA	-6	True	AATAAA	-18	NA	43545671	43527845	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_43528744_43529134_43529237_43529503_43529677_43529883_43529953_43530106_43530182_43532673_43532940_43533186_43533349_43533858_43533986_43536425_43536480_43544974_43545023_43545273_43545368_43545557
transcript_87051.nic	chr17	-	1313	4	NIC	ENSG00000108861.9	novel	1019	4	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	2	30	junction_1	71.4438396380137	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAAGGTATTGTTTTTTT	-43775090	True	NA	NA	False	AATAAA	-11	NA	43778998	43766130	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_43766785_43769581_43769815_43774711_43774939_43778799
transcript_87053.known	chr17	-	4095	3	FSM	ENSG00000108861.9	ENST00000226004.8	4095	3	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	16	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTATTGTTTTTTTGTCCTT	-43775069	True	NA	NA	False	AATAAA	-17	NA	43778977	43766124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_43769815_43774711_43774939_43778799
transcript_87056.known	chr17	-	2790	20	FSM	ENSG00000161647.19	ENST00000398389.9	2790	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	10.9802138846613	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGGCCTAATGGGTTGT	-43832601	True	NA	NA	False	AATAAA	-17	NA	43833146	43800810	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_43801878_43808955_43809079_43810806_43810916_43811111_43811206_43814010_43814092_43814196_43814362_43816037_43816080_43816676_43816698_43818045_43818111_43820861_43821059_43823930_43824006_43825755_43825842_43827750_43827833_43829653_43829792_43830026_43830108_43831243_43831322_43831558_43831678_43831881_43831944_43832760_43832820_43833100
transcript_87064.known	chr17	-	2186	19	FSM	ENSG00000161647.19	ENST00000496503.5	2186	19	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	7.29197089312436	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAAGTAGCCACTGTCTTT	-43832625	True	NA	3	True	ATTAAA	-39	NA	43833170	43801417	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_43801878_43808955_43809079_43810806_43810916_43811111_43811206_43814010_43814092_43814196_43814362_43816037_43816080_43818045_43818111_43820861_43821059_43823930_43824006_43825755_43825842_43827750_43827833_43829653_43829792_43830026_43830108_43831243_43831322_43831558_43831678_43831881_43831944_43832760_43832820_43833100
transcript_87081.nic	chr17	-	2435	9	ISM	ENSG00000161647.19	ENST00000496503.5	2186	19	-100	22778	-100	845	5prime_fragment	FALSE	canonical	3	22	junction_2	5.14174095030078	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACAGTTACTTGGTTACT	NA	False	NA	NA	False	AATAAA	-21	NA	43833270	43824195	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_43825842_43827750_43827833_43829653_43829792_43830026_43830108_43831243_43831322_43831558_43831678_43831881_43831944_43832760_43832820_43833100
transcript_87096.known	chr17	-	4202	13	FSM	ENSG00000108852.16	ENST00000269095.9	4202	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_12	82.7369912567663	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTCTGGCTCTGCTTTTC	-43907501	False	NA	-4	True	ATTAAA	-13	NA	43907536	43875359	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_43877984_43879274_43879404_43879781_43879985_43880690_43880853_43881089_43881159_43881243_43881350_43881457_43881590_43882283_43882512_43882902_43883053_43883202_43883356_43898261_43898381_43904429_43904494_43907473
transcript_87100.known	chr17	-	4206	12	FSM	ENSG00000108852.16	ENST00000377184.7	4206	12	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_2	15.8713838856692	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGCTCTGCTTTTCTTT	-43896136	True	NA	-1	True	ATTAAA	-16	NA	43900598	43875356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_43877984_43879274_43879404_43879781_43879985_43880690_43880853_43881089_43881159_43881243_43881350_43881457_43881590_43882283_43882512_43882902_43883053_43883202_43883356_43898261_43898381_43900470
transcript_87117.nic	chr17	-	1115	8	ISM	ENSG00000108852.16	ENST00000377184.7	4206	12	-65	5768	-65	1220	5prime_fragment	FALSE	canonical	3	200	junction_3	15.3290440614128	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCGAATGATGTATTTGA	-43896201	True	NA	NA	False	AAGAAA	-3	NA	43900663	43881124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_43881159_43881243_43881350_43881457_43881590_43882283_43882512_43882902_43883053_43883202_43883356_43898261_43898381_43900470
transcript_87118.known	chr17	-	445	2	FSM	ENSG00000282199.1	ENST00000591374.5	445	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTTTTTGTGAGTTATC	-43917375	False	NA	NA	False	ATTAAA	-16	NA	43917399	43914432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_43914771_43917292
transcript_87120.known	chr17	-	1053	7	FSM	ENSG00000131096.11	ENST00000360085.6	1053	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	5.79271573232759	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGAATGTATGCCTTTGTAT	-44004457	False	NA	-3	True	AATAAA	-19	NA	44004469	43952737	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_43952981_43953108_43953190_43953295_43953484_43953849_43953976_43957937_43958029_43966287_43966533_44004390
transcript_87121.known	chr17	+	2114	7	FSM	ENSG00000161653.11	ENST00000293404.8	2114	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	12.4632793972266	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAGCTTACACTTGAAAGA	44004450	True	NA	20	True	ATTAAA	-21	NA	44004621	44009068	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44005090_44005636_44005912_44006023_44006238_44006528_44006710_44007322_44007495_44007590_44007774_44008447
transcript_87130.known	chr17	+	1955	4	FSM	ENSG00000161653.11	ENST00000592915.1	1955	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	8.83176086632785	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGTCAGCTTACACTTG	44005910	True	NA	15	True	ATTAAA	-16	NA	44006047	44009063	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44006238_44006528_44007495_44007590_44007774_44008447
transcript_87131.known	chr17	-	1525	4	FSM	ENSG00000091947.10	ENST00000206380.8	1525	4	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	3.68178700572909	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTTGCTTTTCTGTT	-44012932	True	NA	-3	True	AATAAA	-16	NA	44014963	44011187	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44012237_44013008_44013156_44014356_44014538_44014815
transcript_87134.known	chr17	-	965	3	FSM	ENSG00000091947.10	ENST00000587529.1	965	3	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_2	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCCATATTCAGAGGTGG	-44012921	True	NA	NA	False	NA	NA	NA	44014952	44012508	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44013156_44014356_44014538_44014815
transcript_87135.known	chr17	-	966	6	FSM	ENSG00000161654.10	ENST00000585388.2	966	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	490.218318711164	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGCCGGGGGAGGGAAG	-44049391	True	NA	NA	False	NA	NA	NA	44066659	44036142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44036301_44036861_44037103_44037411_44037539_44040146_44040257_44063800_44063935_44066463
transcript_87140.known	chr17	-	2552	5	FSM	ENSG00000161654.10	ENST00000293406.8	2552	5	0	0	0	0	multi-exon	FALSE	canonical	3	922	junction_1	61.5589148702282	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGTCTGAACTTGATTT	-44049403	True	NA	-1	True	AGTAAA	-18	NA	44066671	44034327	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44036301_44037411_44037539_44040146_44040257_44063800_44063935_44066463
transcript_87152.known	chr17	-	2791	6	FSM	ENSG00000161654.10	ENST00000591247.6	2791	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	398.620922682189	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGTCTGAACTTGATTT	-44067481	False	NA	-1	True	AGTAAA	-18	NA	44067619	44034327	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44036301_44037411_44037539_44040146_44040257_44063800_44063935_44066463_44066734_44067442
transcript_87162.known	chr17	+	1573	6	FSM	ENSG00000141349.9	ENST00000269097.9	1573	6	0	0	0	0	multi-exon	TRUE	canonical	3	717	junction_4	76.5819822151399	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCTTTCTTGCCTATGC	44070708	True	NA	24	True	AATAAA	-18	NA	44070734	44076344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44071184_44074159_44074267_44074679_44074771_44074968_44075088_44075309_44075452_44075679
transcript_87164.known	chr17	+	1572	6	FSM	ENSG00000141349.9	ENST00000585361.5	1572	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	325.43853490329	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGCAGCCAGGGCGGCCC	44070724	False	NA	-20	True	NA	NA	NA	44070750	44076300	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44071243_44074159_44074267_44074679_44074771_44074968_44075088_44075309_44075452_44075679
transcript_87165.known	chr17	+	851	5	FSM	ENSG00000141349.9	ENST00000590639.1	851	5	0	0	0	0	multi-exon	FALSE	canonical	3	817	junction_3	47.8611272328599	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGGGAAATGGCCAGAAGA	44071147	False	NA	NA	False	NA	NA	NA	44071166	44075832	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44071184_44074159_44074267_44074679_44074771_44074968_44075452_44075679
transcript_87166.nic	chr17	+	1326	5	NIC	ENSG00000141349.9	novel	1573	6	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_3	375.787423286091	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCTTTCTTGCCTATGC	44057327	True	NA	24	True	AATAAA	-18	NA	44070862	44076344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_44071184_44074159_44074267_44074679_44074771_44075309_44075452_44075679
transcript_87173.known	chr17	-	3662	27	FSM	ENSG00000108840.16	ENST00000586802.5	3662	27	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_26	97.5992288261317	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGTGTGCCGTGTGGGTC	-44118278	False	NA	35	True	ATTAAA	-22	NA	44123275	44078293	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44078416_44078499_44078666_44078794_44078880_44079143_44079278_44080106_44080226_44080400_44080499_44080762_44080883_44082584_44082673_44082764_44082821_44083544_44083653_44083804_44083855_44084554_44084676_44085021_44085156_44086571_44086738_44087411_44087697_44088386_44088599_44091269_44091493_44091699_44091832_44092171_44092285_44092380_44092528_44092675_44092807_44093091_44093207_44093313_44093486_44093574_44093835_44110728_44110801_44117493_44117705_44123253
transcript_87174.known	chr17	-	5319	27	FSM	ENSG00000108840.16	ENST00000682912.1	5319	27	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_25	69.9831340628186	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGGGCCAATGTCTCTA	-44118644	True	NA	-10	True	AATAAA	-19	NA	44123641	44076752	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44078416_44078499_44078666_44078794_44078880_44079143_44079278_44080106_44080226_44080400_44080499_44080762_44080883_44082584_44082673_44082764_44082821_44083544_44083653_44083804_44083855_44084554_44084676_44085021_44085156_44086571_44086738_44087411_44087697_44088386_44088599_44091269_44091493_44091699_44091832_44092171_44092285_44092380_44092528_44092675_44092807_44093091_44093207_44093313_44093486_44093574_44093835_44110728_44110801_44117493_44117705_44123503
transcript_87176.known	chr17	-	5326	27	FSM	ENSG00000108840.16	ENST00000225983.10	5326	27	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_25	71.2416090771771	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAATGTCTCTATTCTCTG	-44118641	True	NA	-3	True	AATAAA	-26	NA	44123638	44076745	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44078416_44078499_44078666_44078794_44078880_44079143_44079278_44080106_44080226_44080400_44080499_44080762_44080883_44082584_44082673_44082764_44082821_44083544_44083653_44083804_44083855_44084554_44084676_44085021_44085156_44086571_44086738_44087411_44087697_44088386_44088599_44091269_44091493_44091699_44091832_44092171_44092285_44092380_44092528_44092675_44092807_44093091_44093207_44093313_44093486_44093574_44093835_44110728_44110804_44117493_44117705_44123503
transcript_87190.known	chr17	-	5040	25	FSM	ENSG00000108840.16	ENST00000336057.9	5040	25	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_11	99.7786351964521	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGGGCCAATGTCTCT	-44118621	True	NA	-11	True	AATAAA	-18	NA	44123618	44076753	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44078416_44078499_44078666_44078794_44078880_44079143_44079278_44080106_44080226_44080400_44080499_44080762_44080883_44082584_44082673_44082764_44082821_44083544_44083653_44083804_44083855_44086571_44086738_44087411_44087697_44088386_44088599_44091269_44091493_44091699_44091832_44092171_44092285_44092380_44092528_44092675_44092807_44093091_44093207_44093313_44093486_44093574_44093835_44110728_44110801_44117493_44117705_44123503
transcript_87210.known	chr17	+	2698	10	FSM	ENSG00000125319.15	ENST00000585683.6	2698	10	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	28.6239992547047	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTCCCTTTCTTTT	44140503	True	NA	4	True	AATAAA	-14	NA	44141929	44162476	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44142146_44145202_44145254_44147857_44149028_44150960_44151045_44152636_44152778_44154555_44154665_44154852_44154939_44155285_44155412_44157832_44157942_44161870
transcript_87217.nic	chr17	+	2600	9	NIC	ENSG00000125319.15	novel	2698	10	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_8	42.2640509180083	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTCCCTTTCTTTT	44140492	True	NA	4	True	AATAAA	-14	NA	44141918	44162476	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_44142146_44145202_44145254_44147857_44149028_44150960_44151045_44152636_44152778_44154555_44154665_44154852_44154939_44155285_44155412_44161870
transcript_87219.nnic	chr17	+	2625	9	NIC	ENSG00000125319.15	novel	2698	10	NA	NA	-44	0	combination_of_known_splicesites	TRUE	canonical	3	11	junction_4	42.5404219537136	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTCCCTTTCTTTT	NA	False	NA	4	True	AATAAA	-14	NA	44141861	44162476	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_44142146_44145202_44145254_44147857_44149028_44150960_44151045_44154555_44154665_44154852_44154939_44155285_44155412_44157832_44157942_44161870
transcript_87221.nic	chr17	+	2682	9	NIC	ENSG00000125319.15	novel	2698	10	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	41.1969355656461	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTCCCTTTCTTTT	NA	False	NA	4	True	AATAAA	-14	NA	44141861	44162476	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_44142146_44145202_44145254_44147857_44149028_44152636_44152778_44154555_44154665_44154852_44154939_44155285_44155412_44157832_44157942_44161870
transcript_87231.nic	chr17	+	2541	8	NIC	ENSG00000125319.15	novel	2698	10	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_3	38.9594242089623	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTCCCTTTCTTTT	NA	False	NA	4	True	AATAAA	-14	NA	44141861	44162476	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_44142146_44145202_44145254_44147857_44149028_44154555_44154665_44154852_44154939_44155285_44155412_44157832_44157942_44161870
transcript_87236.known	chr17	+	2272	7	FSM	ENSG00000125319.15	ENST00000245382.6	2272	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	54.2186929634666	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTCCCTTTCTTTT	44140595	True	NA	4	True	AATAAA	-14	NA	44142021	44162476	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44142146_44145202_44145254_44147857_44149028_44154555_44154665_44154852_44154939_44155285_44155412_44161870
transcript_87246.nic	chr17	+	3001	4	ISM	ENSG00000125319.15	ENST00000319977.8	2725	10	-44	10020	-44	-311	5prime_fragment	FALSE	canonical	3	54	junction_3	43.2229362980145	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTCACATACCATTTTCT	NA	False	NA	65	True	AAAAAG	-17	NA	44141861	44152456	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_44142146_44145202_44145254_44147857_44149028_44150960
transcript_87250.nic	chr17	-	1107	4	NIC	ENSG00000267080.7	novel	2249	4	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	2	20	junction_2	1.24721912892465	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATAATATTTTCTTTCTG	-44185565	True	NA	-14	True	AATAAA	-6	NA	44186734	44175967	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_44176643_44181622_44181721_44182929_44183094_44186564
transcript_87255.known	chr17	-	2249	4	FSM	ENSG00000267080.7	ENST00000585457.6	2249	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	3.29983164553722	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAGTTATAATATTTTCT	-44185538	True	NA	-19	True	AATAAA	-1	NA	44186707	44175972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44177817_44181622_44181721_44182929_44183094_44186564
transcript_87257.known	chr17	-	2024	4	FSM	ENSG00000267080.7	ENST00000669052.1	2024	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	11.7284080571728	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTGGCTAATTTTTTAA	-44185540	True	NA	NA	False	NA	NA	NA	44186709	44176220	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44177817_44181622_44181742_44182929_44183094_44186564
transcript_87258.known	chr17	-	916	3	FSM	ENSG00000267080.7	ENST00000588785.6	916	3	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	10	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATAATATTTTCTTTCTG	-44185538	True	NA	-14	True	AATAAA	-6	NA	44186707	44175967	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44176643_44181622_44181721_44186564
transcript_87261.known	chr17	-	1853	3	FSM	ENSG00000267080.7	ENST00000667684.1	1853	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	7	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTGGCTAATTTTTTAA	-44185554	True	NA	NA	False	NA	NA	NA	44186723	44176220	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44177817_44181622_44181721_44186564
transcript_87272.known	chr17	-	4795	21	FSM	ENSG00000108312.15	ENST00000436088.6	4795	21	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_20	112.669472351653	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGACTGCTGTCTGGTC	-44219555	False	NA	-13	True	AATAAA	-13	NA	44219675	44205039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44207368_44207453_44207598_44207698_44207771_44207863_44207912_44209351_44209542_44209644_44209734_44210123_44210235_44210317_44210474_44210791_44210948_44211038_44211153_44211289_44211332_44211605_44211748_44211872_44212007_44212343_44212455_44212818_44212940_44213217_44213283_44215653_44215810_44215905_44215990_44216528_44216705_44218171_44218297_44219444
transcript_87275.known	chr17	-	4997	21	FSM	ENSG00000108312.15	ENST00000302904.8	4997	21	0	0	0	0	multi-exon	TRUE	canonical	3	62	junction_20	121.20948807746	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTCTGGTCACTGGAA	-44221506	False	120	-6	True	AATAAA	-20	NA	44221626	44205032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44207368_44207453_44207598_44207698_44207771_44207863_44207912_44209351_44209542_44209644_44209734_44210123_44210235_44210317_44210474_44210791_44210948_44211038_44211153_44211289_44211332_44211605_44211748_44211872_44212007_44212343_44212455_44212818_44212940_44213217_44213283_44215653_44215810_44215905_44215990_44216528_44216705_44218171_44218297_44221200
transcript_87281.nic	chr17	-	3294	21	NIC	ENSG00000108312.15	novel	4997	21	NA	NA	-61	0	combination_of_known_junctions	FALSE	canonical	3	122	junction_20	112.929801204111	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTCGGCTGCCGTCTCTG	-44220904	False	NA	NA	False	NA	NA	NA	44221024	44206594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_44207368_44207453_44207598_44207698_44207771_44207863_44207912_44209351_44209542_44209644_44209734_44210123_44210235_44210317_44210474_44210791_44210948_44211038_44211153_44211289_44211332_44211605_44211748_44211872_44212007_44212343_44212455_44212818_44212940_44213217_44213283_44215653_44215810_44215905_44215990_44216528_44216705_44218171_44218297_44220739
transcript_87287.known	chr17	-	2683	20	FSM	ENSG00000108312.15	ENST00000393606.7	2683	20	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_19	98.5191461628897	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATACGG	-44219630	False	NA	NA	False	NA	NA	NA	44219750	44207115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44207368_44207453_44207598_44207698_44207771_44207863_44207912_44209351_44209542_44209644_44209734_44210123_44210235_44210317_44210474_44210791_44210948_44211038_44211153_44211289_44211332_44211605_44211748_44211872_44212007_44212818_44212940_44213217_44213283_44215653_44215810_44215905_44215990_44216528_44216705_44218171_44218297_44219444
transcript_87288.known	chr17	-	3010	20	FSM	ENSG00000108312.15	ENST00000527034.5	3010	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	137.878765648016	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCGGCTGCCGTCTCTGT	-44219700	True	NA	NA	False	NA	NA	NA	44220854	44206593	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44207368_44207453_44207598_44207702_44207771_44207863_44207912_44209351_44209542_44209644_44209734_44210123_44210235_44210317_44210474_44210791_44210948_44211038_44211153_44211289_44211332_44211605_44211748_44211872_44212007_44212818_44212940_44213217_44213283_44215653_44215810_44215905_44215990_44216528_44216705_44218171_44218297_44220739
transcript_87299.nic	chr17	-	3818	20	Fusion	ENSG00000108312.15_ENSG00000288877.1	novel	3011	20	NA	NA	12	0	multi-exon	FALSE	canonical	3	62	junction_19	109.074042807647	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTCGGCTGCCGTCTCTG	NA	False	NA	NA	False	NA	NA	NA	44222120	44206594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Fusion_chr17_-_44207368_44207453_44207598_44207698_44207771_44207863_44207912_44209351_44209542_44209644_44209734_44210123_44210235_44210317_44210474_44210791_44210948_44211038_44211153_44211289_44211332_44211605_44211748_44211872_44212007_44212818_44212940_44213217_44213283_44215653_44215810_44215905_44215990_44216528_44216705_44218171_44218297_44221200
transcript_87328.known	chr17	-	3951	13	FSM	ENSG00000087152.16	ENST00000587097.6	3951	13	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_12	34.4536725989488	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGGCCTACCTACTCTC	-44199098	True	NA	-14	True	AATAAA	-19	NA	44199884	44191804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44194412_44194516_44194675_44194767_44194840_44195096_44195141_44195418_44195488_44195799_44195829_44196033_44196080_44196395_44196419_44196928_44197027_44197227_44197400_44197597_44197731_44198019_44198131_44199495
transcript_8733.known	chr1	-	382	1	FSM	ENSG00000225447.1	ENST00000432472.1	382	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGCAATACATATTTACA	-45646187	False	NA	NA	False	AAAACA	-35	NA	45646197	45645815	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45645800_45646200
transcript_87332.known	chr17	-	3811	12	FSM	ENSG00000087152.16	ENST00000389384.8	3811	12	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_10	28.7637857713623	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGGCCTACCTACTCTC	-44198336	False	NA	-14	True	AATAAA	-19	NA	44198379	44191804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44194412_44194516_44194675_44194767_44194840_44195096_44195141_44195418_44195488_44195799_44195829_44196033_44196080_44196395_44196419_44196928_44197027_44197227_44197400_44197597_44197731_44198019
transcript_8736.known	chr1	-	3117	9	FSM	ENSG00000197429.11	ENST00000396478.4	3117	9	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	5.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTTCCTTTTTTGCTA	-45750180	True	NA	NA	False	AAAAAG	-7	NA	45750653	45698710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_45700191_45714245_45714467_45716894_45717018_45719202_45719341_45727630_45727799_45729613_45729770_45740900_45741333_45746119_45746462_45750596
transcript_87370.known	chr17	+	2151	4	FSM	ENSG00000168591.16	ENST00000592825.1	2151	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	19.7989898732233	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATTTTGTGGTCCTGCA	44185855	True	NA	-6	True	AATAAA	-2	NA	44187271	44191711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44187744_44187906_44188010_44188934_44189300_44190500
transcript_87371.nic	chr17	+	2759	4	NIC	ENSG00000168591.16	novel	1580	6	NA	NA	-3	0	intron_retention	FALSE	canonical	3	39	junction_2	28.7672653471886	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCAGCCTCTTTCTGTGA	44186946	False	NA	8	True	AATAAA	-16	NA	44186966	44191725	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_44187744_44187906_44188010_44188934_44189589_44190500
transcript_87389.known	chr17	+	1837	3	FSM	ENSG00000168591.16	ENST00000589184.5	1837	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	8.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATTTTGTGGTCCTGCA	44185858	True	NA	-6	True	AATAAA	-2	NA	44187274	44191711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44187744_44188934_44189092_44190500
transcript_87391.known	chr17	+	2418	3	FSM	ENSG00000168591.16	ENST00000319511.6	2418	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	40	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGCCTCTTTCTGTGAC	44185789	True	NA	9	True	AATAAA	-17	NA	44187205	44191726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44187744_44188934_44189589_44190500
transcript_87394.known	chr17	+	1921	3	FSM	ENSG00000168591.16	ENST00000357984.7	1921	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	47	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCTTTCTGTGACAGAG	44186740	True	NA	13	True	AATAAA	-21	NA	44186985	44191730	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44187110_44189021_44189589_44190500
transcript_87395.nic	chr17	+	2025	3	NIC	ENSG00000168591.16	novel	747	5	NA	NA	-7	0	intron_retention	FALSE	canonical	3	38	junction_1	34.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCAGCCTCTTTCTGTGA	44187151	False	NA	8	True	AATAAA	-16	NA	44187198	44191725	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_44187432_44189021_44189589_44190500
transcript_87396.known	chr17	+	1918	3	FSM	ENSG00000168591.16	ENST00000589785.1	1918	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	35	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATTTTGTGGTCCTGCAG	44185845	True	NA	-5	True	AATAAA	-3	NA	44187261	44191712	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44187401_44189021_44189589_44190500
transcript_8740.known	chr1	+	1465	3	FSM	ENSG00000159596.7	ENST00000372025.5	1465	3	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_1	8.5	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTAGAGTCTTGTGATC	45680714	True	NA	11	True	ATTAAA	-15	NA	45688180	45694436	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45688276_45690973_45691111_45693203
transcript_87401.known	chr17	+	569	2	FSM	ENSG00000260793.3	ENST00000588279.1	569	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTTTTTTTTTTTTTT	44221388	True	NA	NA	False	NA	NA	NA	44221400	44222814	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44221617_44222461
transcript_87404.known	chr17	+	1821	11	FSM	ENSG00000108309.14	ENST00000225441.11	1821	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	2.95972971738975	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGGGAGACAGAGACATCAA	44308549	True	NA	22	True	AATAAA	-27	NA	44308595	44317870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44308940_44312579_44312696_44313103_44313253_44313417_44313504_44314734_44314825_44314928_44315010_44315154_44315321_44315451_44315610_44316384_44316523_44316618_44316726_44317484
transcript_87405.known	chr17	+	2005	11	FSM	ENSG00000108309.14	ENST00000426726.8	2005	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	3.29241552663087	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCAGCCTTGTATGTGGGG	44308554	True	NA	11	True	AATAAA	-15	NA	44308600	44318670	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44308940_44312579_44312696_44313103_44313253_44313417_44313504_44314734_44314825_44314928_44315010_44315154_44315321_44315451_44315610_44316384_44316523_44316618_44316726_44318095
transcript_87407.nic	chr17	+	2015	11	NIC	ENSG00000108309.14	novel	2005	11	NA	NA	-8	0	combination_of_known_junctions	TRUE	canonical	1	1	junction_4	3.19530906173409	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCAGCCTTGTATGTGGG	44308528	True	NA	10	True	AATAAA	-14	NA	44308574	44318669	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_44308940_44312579_44312696_44313118_44313253_44313417_44313504_44314734_44314825_44314928_44315010_44315154_44315321_44315451_44315610_44316384_44316523_44316618_44316726_44318095
transcript_87420.known	chr17	-	1542	12	FSM	ENSG00000013306.16	ENST00000590194.5	1542	12	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_11	808.774095276353	1375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGATGAACTTCTGCCTG	-44298510	True	NA	NA	False	NA	NA	NA	44324809	44319641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44320117_44320195_44320277_44320354_44320437_44320621_44320732_44321057_44321232_44321433_44321559_44321699_44321768_44322418_44322529_44322807_44322853_44323283_44323344_44323477_44323591_44324710
transcript_87425.known	chr17	-	1581	12	FSM	ENSG00000013306.16	ENST00000377095.10	1581	12	0	0	0	0	multi-exon	FALSE	canonical	3	667	junction_8	627.020726719251	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGCCTGTCCCTCT	-44298524	True	NA	NA	False	NA	NA	NA	44324823	44319627	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44320117_44320195_44320277_44320354_44320437_44320621_44320732_44321057_44321232_44321433_44321559_44321699_44321768_44322418_44322553_44322807_44322853_44323283_44323344_44323477_44323578_44324710
transcript_8743.nnic	chr1	+	1459	3	NNC	ENSG00000159596.7	novel	1465	3	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	185.5	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTAGAGTCTTGTGATC	45680698	True	NA	11	True	ATTAAA	-15	NA	45688164	45694436	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_45688254_45690973_45691111_45693203
transcript_87431.known	chr17	-	1274	11	FSM	ENSG00000013306.16	ENST00000537904.6	1274	11	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_8	831.950575455057	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCAGGGCTGTCCCTCTGG	-44298528	True	NA	NA	False	GGGGCT	-32	NA	44324827	44319869	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44320117_44320195_44320277_44320354_44320437_44320621_44320732_44321057_44321232_44321433_44321559_44321699_44321768_44322418_44322529_44323283_44323344_44323477_44323578_44324710
transcript_8745.known	chr1	+	722	2	FSM	ENSG00000159596.7	ENST00000496366.1	722	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTAGTAGTTAAAAGTAG	45680729	True	NA	NA	False	NA	NA	NA	45688195	45693845	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45688276_45693203
transcript_8746.nic	chr1	+	5753	30	NNC	ENSG00000086015.23	novel	5737	29	NA	NA	-80	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_25	36.290347180128	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTATGTCTTTTGCTTGC	45800574	True	NA	23	True	AATATA	-16	NA	45803531	46036122	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_45804073_45824432_45824581_45829438_45829582_45882363_45882396_45959385_45959478_45997723_45997800_46002804_46002884_46006240_46006396_46008295_46008372_46010729_46010940_46019595_46019698_46021949_46022083_46022909_46022972_46023232_46023319_46023771_46023981_46025676_46025816_46027730_46027864_46028767_46028934_46029465_46029568_46029830_46029954_46030128_46030239_46030606_46030762_46031006_46031291_46031390_46031586_46032177_46032262_46032325_46032405_46032595_46032719_46033801_46033939_46034072_46034267_46034537
transcript_8751.known	chr1	+	5737	29	FSM	ENSG00000086015.23	ENST00000361297.7	5737	29	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_3	18.601178095234	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTATGTCTTTTGCTTGC	45800654	True	NA	23	True	AATATA	-16	NA	45803611	46036122	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_45804073_45824432_45824581_45829438_45829582_45882363_45882396_45959385_45959478_45997723_45997800_46002804_46002884_46006240_46006396_46008295_46008372_46010729_46010940_46019595_46019698_46021949_46022083_46022909_46022972_46023232_46023319_46023771_46023981_46025676_46025816_46027730_46027864_46028767_46028934_46029465_46029568_46029830_46029954_46030128_46030239_46030606_46030762_46031006_46031291_46031390_46031586_46032177_46032405_46032595_46032719_46033801_46033939_46034072_46034267_46034537
transcript_87518.known	chr17	+	2130	13	FSM	ENSG00000030582.18	ENST00000053867.8	2130	13	0	0	0	0	multi-exon	FALSE	canonical	3	542	junction_1	107.422161742042	2627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCTGATTTGCCGCCC	44330720	True	NA	21	True	AATAAA	-19	NA	44345301	44353106	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44345335_44349157_44349303_44349425_44349552_44349666_44349752_44350227_44350341_44350441_44350578_44350690_44350801_44351036_44351164_44351362_44351461_44351549_44351796_44352014_44352249_44352340_44352572_44352660
transcript_87524.nic	chr17	+	2443	13	NIC	ENSG00000030582.18	novel	2130	13	NA	NA	-2	0	intron_retention	FALSE	canonical	3	151	junction_1	210.590175986968	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCTGATTTGCCGCCC	44330678	True	NA	21	True	AATAAA	-19	NA	44345259	44353106	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_44345606_44349157_44349303_44349425_44349552_44349666_44349752_44350227_44350341_44350441_44350578_44350690_44350801_44351036_44351164_44351362_44351461_44351549_44351796_44352014_44352249_44352340_44352572_44352660
transcript_87549.known	chr17	+	1632	9	FSM	ENSG00000030582.18	ENST00000589265.5	1632	9	0	0	0	0	multi-exon	TRUE	canonical	2	53	junction_5	299.310457552021	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGTTTGTACACTTTC	44330723	True	NA	-3	True	NA	NA	NA	44345304	44353082	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44345335_44349157_44349303_44349425_44349552_44349666_44349752_44350227_44350341_44351549_44351796_44352014_44352249_44352340_44352572_44352660
transcript_87555.nic	chr17	-	1980	4	ISM	ENSG00000161682.15	ENST00000588067.1	964	6	-78	1495	-59	-1495	5prime_fragment	TRUE	canonical	3	36	junction_1	49.2363912388207	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTATTGGAATTGTTTG	NA	False	NA	-11	True	AATAAA	-16	NA	44363912	44357800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_44359144_44359578_44359672_44359904_44360133_44363596
transcript_87557.nic	chr17	-	2805	26	ISM	ENSG00000005961.19	ENST00000262407.6	3479	30	4238	0	-48	0	3prime_fragment	FALSE	canonical	2	25	junction_19	13.250569799069	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGCATGCTGCCTCCT	-44385031	True	NA	-36	True	AATAAA	-16	NA	44385411	44372180	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_44372424_44374353_44374471_44374658_44374761_44374997_44375112_44375590_44375717_44375832_44375986_44376084_44376185_44376307_44376389_44377008_44377089_44377697_44377791_44378361_44378510_44378642_44378711_44379688_44379815_44380001_44380154_44380245_44380302_44380385_44380491_44380599_44380646_44380878_44381062_44383492_44383705_44383893_44383947_44384084_44384139_44384310_44384355_44384537_44384586_44384947_44385077_44385163_44385210_44385285
transcript_87560.known	chr17	-	2618	25	FSM	ENSG00000005961.19	ENST00000648408.1	2618	25	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	14.613540144522	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGCATGCTGCCTCCTT	-44384960	True	NA	-35	True	AATAAA	-17	NA	44385340	44372179	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44372424_44374658_44374761_44374997_44375112_44375590_44375717_44375832_44375986_44376084_44376185_44376307_44376389_44377008_44377089_44377697_44377791_44378361_44378510_44378642_44378711_44379688_44379815_44380001_44380154_44380245_44380302_44380385_44380491_44380599_44380646_44380878_44381062_44383492_44383705_44383893_44383947_44384084_44384139_44384310_44384355_44384537_44384586_44384947_44385077_44385163_44385210_44385285
transcript_87567.nic	chr17	-	3425	25	NIC	ENSG00000005961.19	novel	3479	30	NA	NA	-48	0	intron_retention	FALSE	canonical	2	25	junction_18	13.0697248759617	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGCATGCTGCCTCCT	-44385031	True	NA	-36	True	AATAAA	-16	NA	44385411	44372180	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_44372424_44374353_44374471_44374658_44374761_44374997_44375112_44375590_44375717_44375832_44375986_44376084_44376185_44376307_44377089_44377697_44377791_44378361_44378510_44378642_44378711_44379688_44379815_44380001_44380154_44380245_44380302_44380385_44380491_44380599_44380646_44380878_44381062_44383492_44383705_44383893_44383947_44384084_44384139_44384310_44384355_44384537_44384586_44384947_44385077_44385163_44385210_44385285
transcript_87570.nnic	chr17	-	2703	25	NIC	ENSG00000005961.19	novel	3479	30	NA	NA	-48	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	14.6855347384954	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGCATGCTGCCTCCT	-44385031	True	NA	-36	True	AATAAA	-16	NA	44385411	44372180	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_44372424_44374353_44374471_44374997_44375112_44375590_44375717_44375832_44375986_44376084_44376185_44376307_44376389_44377008_44377089_44377697_44377791_44378361_44378510_44378642_44378711_44379688_44379815_44380001_44380154_44380245_44380302_44380385_44380491_44380599_44380646_44380878_44381062_44383492_44383705_44383893_44383947_44384084_44384139_44384310_44384355_44384537_44384586_44384947_44385077_44385163_44385210_44385285
transcript_87601.known	chr17	-	496	3	FSM	ENSG00000005961.19	ENST00000587295.5	496	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	37	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGCATGCTGCCTCCT	-44375804	False	380	-36	True	AATAAA	-16	NA	44376184	44372180	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44372424_44375832_44375986_44376084
transcript_87607.known	chr17	-	4713	9	FSM	ENSG00000186566.13	ENST00000587228.5	4713	9	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_6	41.0670183967621	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAAGTTTGCTTTCAGT	-44498748	True	NA	NA	False	NA	NA	NA	44503404	44397415	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44401454_44405920_44406052_44424348_44424493_44435064_44435152_44436477_44436546_44464471_44464545_44467096_44467115_44474828_44474904_44503325
transcript_87612.known	chr17	-	6832	8	FSM	ENSG00000186566.13	ENST00000591680.6	6832	8	0	0	0	0	multi-exon	TRUE	canonical	3	84	junction_2	13.5631553730491	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAGCAGAGTCTGTCGTAA	-44498750	True	NA	-4	True	AATAAA	-18	NA	44503406	44395280	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44401454_44405920_44406052_44424348_44424493_44435064_44435152_44436477_44436546_44464471_44464545_44474828_44474904_44503325
transcript_87615.nnic	chr17	-	2238	7	NIC	ENSG00000186566.13	novel	6832	8	NA	NA	-202	1309	combination_of_known_splicesites	FALSE	canonical	2	4	junction_5	39.4732680289951	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCAGCAAACACAAACGTAA	-44503616	False	NA	NA	False	AAAAAG	-19	NA	44503632	44400027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_44401454_44405920_44406052_44424348_44424493_44435064_44435152_44436477_44436546_44474828_44474904_44503325
transcript_87616.nic	chr17	-	826	7	ISM	ENSG00000186566.13	ENST00000591680.6	6832	8	-226	10699	-202	-4572	5prime_fragment	FALSE	canonical	3	84	junction_1	14.6334851928339	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAAAAAGCCCTTCGGCG	-44503616	False	NA	NA	False	NA	NA	NA	44503632	44405979	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_44406052_44424348_44424493_44435064_44435152_44436477_44436546_44464471_44464545_44474828_44474904_44503325
transcript_87618.nic	chr17	-	606	5	ISM	ENSG00000186566.13	ENST00000591680.6	6832	8	-226	39788	-202	0	5prime_fragment	FALSE	canonical	3	90	junction_3	15.2868407462104	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGGTATTTAAACAAAGCT	-44503616	False	NA	NA	False	AAAAAG	-29	NA	44503632	44435068	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_44435152_44436477_44436546_44464471_44464545_44474828_44474904_44503325
transcript_87619.known	chr17	-	565	2	FSM	ENSG00000186566.13	ENST00000588554.1	565	2	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGTTATATTAAAAACAT	-44498750	True	NA	NA	False	NA	NA	NA	44503406	44474419	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44474904_44503325
transcript_87622.known	chr17	+	4610	8	FSM	ENSG00000180336.18	ENST00000409122.7	4610	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	5.22943006220661	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTTCATTTTTCTAAA	44656080	True	NA	8	True	AATAAA	-18	NA	44656467	44675801	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44656683_44657126_44657262_44662316_44662472_44665383_44665489_44666375_44668234_44669382_44669518_44673365_44673547_44673975
transcript_87627.known	chr17	-	2067	5	FSM	ENSG00000180329.14	ENST00000588210.1	2067	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	130.616566713415	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATAACCACCTTTAAA	-44684887	True	NA	-52	True	NA	NA	NA	44689763	44677482	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44679044_44680584_44680653_44682002_44682139_44683871_44683960_44689549
transcript_87633.known	chr17	-	2058	4	FSM	ENSG00000180329.14	ENST00000457422.6	2058	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	148.041285532861	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTCTGACTTATTTTGA	-44684903	True	NA	-9	True	AATAAA	-40	NA	44689779	44677439	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44679044_44682002_44682139_44683871_44683960_44689549
transcript_87642.known	chr17	-	692	3	FSM	ENSG00000180329.14	ENST00000592333.1	692	3	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_1	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATACAATATAGCTGTA	-44684869	True	NA	NA	False	AAAACA	-38	NA	44689745	44681730	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44682139_44683871_44683960_44689549
transcript_87644.known	chr17	+	3015	14	FSM	ENSG00000161692.18	ENST00000315005.8	3015	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	20.6689888623444	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATCTTTTATGTCTTTC	44705759	True	NA	3	True	AATAAA	-16	NA	44708664	44752264	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44708840_44709303_44709367_44722879_44723023_44729904_44730097_44730964_44731016_44732177_44732266_44734089_44734164_44736829_44736867_44738378_44738425_44741335_44741453_44747082_44747192_44747390_44747516_44748340_44748466_44750594
transcript_87646.nic	chr17	+	3491	13	ISM	ENSG00000161692.18	ENST00000393547.6	1810	15	-7	1717	-7	308	5prime_fragment	FALSE	canonical	3	21	junction_6	16.1887735449258	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGGGGCTGGAATGCCA	NA	False	NA	23	True	AATAAA	-23	NA	44708600	44750547	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_44708840_44709303_44709367_44722879_44723023_44729904_44730097_44730964_44731016_44732177_44732266_44734089_44734164_44736829_44736867_44738378_44738425_44741335_44741453_44747082_44747192_44747390_44747516_44748340
transcript_87648.nnic	chr17	+	3426	13	NNC	ENSG00000161692.18	novel	3015	14	NA	NA	-7	308	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_9	17.5552698640608	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGGGGCTGGAATGCCA	NA	False	NA	23	True	AATAAA	-23	NA	44708600	44750547	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_44708840_44709303_44709367_44722879_44723023_44729904_44730097_44730964_44731016_44732177_44732266_44734089_44734164_44736829_44736867_44738378_44738425_44741400_44741453_44747082_44747192_44747390_44747516_44748340
transcript_8765.nic	chr1	+	3423	15	ISM	ENSG00000086015.23	ENST00000361297.7	5737	29	0	10783	0	975	5prime_fragment	FALSE	canonical	3	121	junction_3	20.6749626754839	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCATCAGATCTCATGAG	45800654	True	NA	NA	False	AATAAA	-11	NA	45803611	46025339	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_45804073_45824432_45824581_45829438_45829582_45882363_45882396_45959385_45959478_45997723_45997800_46002804_46002884_46006240_46006396_46008295_46008372_46010729_46010940_46019595_46019698_46021949_46022083_46022909_46022972_46023232_46023319_46023771
transcript_87656.nnic	chr17	+	3374	12	NIC	ENSG00000161692.18	novel	3015	14	NA	NA	-7	308	combination_of_known_splicesites	FALSE	canonical	3	9	junction_9	19.787298706055	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGGGGCTGGAATGCCA	NA	False	NA	23	True	AATAAA	-23	NA	44708600	44750547	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_44708840_44709303_44709367_44722879_44723023_44729904_44730097_44730964_44731016_44732177_44732266_44734089_44734164_44736829_44736867_44738378_44738425_44747082_44747192_44747390_44747516_44748340
transcript_87657.known	chr17	+	2998	12	FSM	ENSG00000161692.18	ENST00000526924.5	2998	12	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	13.8331258904423	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTGGCCACTTTTTCTT	44705792	True	NA	NA	False	NA	NA	NA	44708697	44750239	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44708840_44709303_44709367_44722879_44723023_44729904_44730097_44730964_44731016_44734089_44734164_44736829_44736867_44738378_44738425_44741335_44741453_44747082_44747192_44747390_44747516_44748340
transcript_87659.nnic	chr17	+	3338	12	NNC	ENSG00000161692.18	novel	2998	12	NA	NA	-7	308	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_8	15.7075546386849	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGGGGCTGGAATGCCA	NA	False	NA	23	True	AATAAA	-23	NA	44708600	44750547	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_44708840_44709303_44709367_44722879_44723023_44729904_44730097_44730964_44731016_44734089_44734164_44736829_44736867_44738378_44738425_44741400_44741453_44747082_44747192_44747390_44747516_44748340
transcript_87668.nic	chr17	+	3313	11	NIC	ENSG00000161692.18	novel	2998	12	NA	NA	20	308	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	17.4817047223662	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGGGGCTGGAATGCCA	44705722	True	NA	23	True	AATAAA	-23	NA	44708627	44750547	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_44708840_44722879_44723023_44729904_44730097_44730964_44731016_44734089_44734164_44736829_44736867_44738378_44738425_44741335_44741453_44747082_44747192_44747390_44747516_44748340
transcript_87669.nnic	chr17	+	3248	11	NNC	ENSG00000161692.18	novel	2998	12	NA	NA	20	308	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	18.8151534673518	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGGGGCTGGAATGCCA	44705722	True	NA	23	True	AATAAA	-23	NA	44708627	44750547	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_44708840_44722879_44723023_44729904_44730097_44730964_44731016_44734089_44734164_44736829_44736867_44738378_44738425_44741400_44741453_44747082_44747192_44747390_44747516_44748340
transcript_87673.known	chr17	+	836	5	FSM	ENSG00000161692.18	ENST00000528766.5	836	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	6.64736790015417	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCCACCTCCAACTCTG	44705750	True	NA	NA	False	NA	NA	NA	44708655	44731218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44708840_44709303_44709367_44722879_44723023_44729904_44730097_44730964
transcript_87674.known	chr17	+	933	5	FSM	ENSG00000161692.18	ENST00000532789.1	933	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	22.544400635191	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGGCGAAACCCCATCT	44708539	True	NA	NA	False	NA	NA	NA	44708861	44731422	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44708939_44709303_44709367_44722879_44723023_44729904_44730097_44730964
transcript_87687.known	chr17	-	7692	3	FSM	ENSG00000182963.11	ENST00000592524.6	7692	3	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_2	40.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGGTTTGTGTTTCCTT	-44825888	True	NA	-6	True	AATACA	-15	NA	44830287	44798447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44805838_44807393_44807470_44830061
transcript_87688.known	chr17	-	586	3	FSM	ENSG00000182963.11	ENST00000591424.5	586	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	76	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGTGAAGCAGACAAGAAGG	-44827744	True	NA	-132	True	NA	NA	NA	44830816	44805506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44805838_44807393_44807470_44830637
transcript_87689.known	chr17	-	478	3	FSM	ENSG00000182963.11	ENST00000586267.1	478	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	96	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCCATGTACGCTTCTG	-44826622	False	NA	NA	False	NA	NA	NA	44829694	44805607	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44805838_44807393_44807470_44829522
transcript_87694.known	chr17	-	4326	28	FSM	ENSG00000108883.13	ENST00000426333.7	4326	28	0	0	0	0	multi-exon	TRUE	canonical	3	837	junction_16	81.9882724391623	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTTCTGTTGCATGAT	-44882030	True	NA	-5	True	NA	NA	NA	44899445	44849947	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44851370_44851709_44851818_44852408_44852563_44853295_44853391_44853516_44853636_44854268_44854357_44854555_44854683_44854917_44855005_44857074_44857158_44859079_44859182_44859904_44860046_44860431_44860544_44862712_44862907_44863654_44863783_44864929_44865066_44867806_44867898_44868286_44868351_44872445_44872571_44875933_44876101_44879555_44879639_44880553_44880645_44881686_44881723_44883092_44883159_44883648_44883725_44885255_44885335_44886584_44886751_44894416_44894526_44899368
transcript_87698.known	chr17	-	3364	28	FSM	ENSG00000108883.13	ENST00000592576.5	3364	28	0	0	0	0	multi-exon	FALSE	canonical	2	29	junction_23	204.343621140191	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCTTACATTCTGAATATA	-44882016	True	NA	-62	True	NA	NA	NA	44899431	44850865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44851370_44851709_44851818_44852408_44852563_44853295_44853391_44853516_44853636_44854268_44854357_44854555_44854683_44854917_44855005_44857074_44857158_44859079_44859182_44859904_44860046_44860431_44860544_44862712_44862907_44863654_44863783_44864929_44865066_44867806_44867898_44868286_44868351_44872445_44872571_44875933_44876101_44879555_44879639_44880553_44880645_44881686_44881723_44883092_44883129_44883648_44883725_44885255_44885335_44886584_44886751_44894416_44894526_44899368
transcript_87702.known	chr17	-	3045	27	FSM	ENSG00000108883.13	ENST00000402521.7	3045	27	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_26	210.903775136587	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCAGTGAGAGAGGAGCAT	-44882030	True	NA	NA	False	NA	NA	NA	44899445	44851119	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44851370_44851709_44851818_44852408_44852563_44853295_44853391_44853516_44853636_44854268_44854357_44854555_44854683_44854917_44855005_44857074_44857158_44859079_44859182_44859904_44860046_44860431_44860544_44862712_44862907_44863654_44863783_44864929_44865066_44867806_44867898_44868286_44868351_44872445_44872571_44875933_44876101_44879555_44879639_44880553_44880645_44881686_44881723_44883092_44883159_44883648_44883725_44885255_44885335_44886584_44886751_44899368
transcript_87728.known	chr17	+	849	4	FSM	ENSG00000167131.17	ENST00000357776.6	849	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.34209919681348	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACCAGGTTGACTGATGC	44899397	True	NA	NA	False	NA	NA	NA	44899715	44902800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44899844_44900989_44901142_44901519_44901653_44902364
transcript_87732.known	chr17	+	3397	4	FSM	ENSG00000214447.5	ENST00000331733.4	3397	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	3.2659863237109	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGCTGCTTTGCTTTCT	44899455	True	NA	8	True	NA	NA	NA	44899773	44905390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_44899860_44900989_44901142_44901519_44901653_44902364
transcript_87734.known	chr17	-	594	4	FSM	ENSG00000131095.14	ENST00000585543.6	594	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0.942809041582063	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCAGCTTGCTGCCCTAGG	-44911417	True	NA	NA	False	NA	NA	NA	44911515	44907204	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44907389_44908063_44908150_44910614_44910659_44911235
transcript_87745.known	chr17	-	4217	15	FSM	ENSG00000186185.14	ENST00000587309.5	4217	15	0	0	0	0	multi-exon	TRUE	canonical	3	122	junction_6	19.1087115510925	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTCTCTCTGTACA	-44943662	True	NA	-2	True	AATAAA	-17	NA	44947637	44924708	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44926500_44926988_44927079_44928025_44928579_44928818_44929025_44931601_44931730_44932055_44932243_44932672_44932774_44932911_44932987_44933922_44934100_44934232_44934431_44934506_44934618_44934830_44934936_44935258_44935417_44936031_44936359_44947627
transcript_8776.known	chr1	-	5174	11	FSM	ENSG00000117461.15	ENST00000420542.5	5174	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_10	16.004999218994	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTTGTCTTCATGCTA	-46132994	False	NA	NA	False	AATAAA	-17	NA	46133036	46040141	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_46043872_46045917_46046089_46046550_46046626_46055794_46055972_46061928_46062072_46066053_46066180_46066910_46067092_46077514_46077614_46080641_46080751_46131846_46131957_46132783
transcript_87763.known	chr17	-	4088	16	FSM	ENSG00000186185.14	ENST00000593135.6	4088	16	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	46.7653242857949	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTGTGTCTCTCTGTA	-44943798	True	NA	-4	True	AATAAA	-15	NA	44947773	44924710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44926187_44926413_44926500_44926988_44927079_44928025_44928579_44928818_44929025_44931601_44931730_44932055_44932207_44932672_44932774_44932911_44932987_44933922_44934100_44934232_44934431_44934506_44934618_44934830_44934936_44935258_44935417_44936031_44936359_44947627
transcript_87764.known	chr17	+	4881	12	FSM	ENSG00000136448.13	ENST00000258960.7	4881	12	0	0	0	0	multi-exon	FALSE	canonical	2	498	junction_8	77.3345207470348	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGTCCTGGTATTCCT	45047821	True	NA	NA	False	AATAAA	-19	NA	45061316	45109016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45061461_45081643_45081753_45086507_45086653_45093684_45093804_45096193_45096286_45097127_45097245_45098381_45098553_45099404_45099514_45102950_45103122_45103708_45103877_45104858_45104997_45105618
transcript_87766.nic	chr17	+	250	2	ISM	ENSG00000136448.13	ENST00000585561.5	807	7	-53	15531	10	-15531	5prime_fragment	FALSE	canonical	3	698	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGTGAGACAGATTCAGC	45047785	True	NA	68	True	AAAAAG	-34	NA	45061280	45081713	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_45061461_45081643
transcript_87767.known	chr17	+	3058	13	FSM	ENSG00000136448.13	ENST00000676828.1	3058	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	211.572419962737	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTTGTTTCTAATAAAGA	45047775	True	NA	NA	False	AATACA	-3	NA	45061270	45108980	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45061461_45081643_45081753_45086507_45086653_45093684_45093804_45096193_45096286_45097127_45097245_45098381_45098553_45099404_45099514_45102950_45103122_45103708_45103877_45104858_45104997_45105618_45105946_45107778
transcript_87769.known	chr17	-	1527	2	FSM	ENSG00000131094.4	ENST00000253407.4	1527	2	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTTTCAGTCTGTGCCCT	-44967717	True	NA	-1	True	AATAAA	-18	NA	44968303	44959692	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_44960368_44967451
transcript_87779.known	chr17	-	1000	5	FSM	ENSG00000172992.13	ENST00000651974.1	2171	5	13	1158	-1	-760	multi-exon	FALSE	canonical	0	0	junction_4	68.521438251105	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACAGGGCTCGCTGCCAT	-45047282	True	NA	NA	False	NA	NA	NA	45051619	45024501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_45024725_45030091_45030180_45034186_45034391_45034773_45035000_45051360
transcript_8778.known	chr1	-	5596	10	FSM	ENSG00000117461.15	ENST00000262741.10	5596	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_7	8.30142037526793	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGTCTTCATGCTATG	-46131501	True	NA	NA	False	AATAAA	-19	NA	46132629	46040139	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_46043872_46045917_46046089_46046550_46046626_46055794_46055972_46061928_46062072_46066053_46066180_46066910_46067092_46077514_46077614_46080641_46080751_46131846
transcript_87780.known	chr17	-	990	5	FSM	ENSG00000172992.13	ENST00000452796.7	2027	5	70	967	5	-569	multi-exon	FALSE	canonical	3	49	junction_4	47.5447157947127	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACACACACACACACACAC	-45047273	True	NA	NA	False	NA	NA	NA	45051610	45024310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_45024725_45030091_45030180_45034186_45034391_45034773_45035000_45051552
transcript_87781.known	chr17	-	2122	5	FSM	ENSG00000172992.13	ENST00000310604.9	2112	5	-8	-2	4	0	multi-exon	FALSE	canonical	1	2	junction_4	67.6623048676292	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAGATTCCCAGACTTG	-45059437	True	NA	-15	True	AATAAA	-28	NA	45061109	45023345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_45024725_45030091_45030180_45034186_45034391_45034773_45035003_45060887
transcript_87790.known	chr17	-	6132	15	FSM	ENSG00000161714.12	ENST00000619929.5	6132	15	0	0	0	0	multi-exon	TRUE	canonical	3	33	junction_4	4.96312936172577	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTTGGTATTTCCTCCC	-45131844	True	NA	NA	False	NA	NA	NA	45132515	45108958	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_45112705_45112862_45113013_45113121_45113258_45113438_45113606_45114249_45114367_45115093_45115245_45115343_45115491_45116631_45116785_45117993_45118139_45118290_45118493_45118814_45119044_45120324_45120455_45120901_45121131_45121210_45121373_45132247
transcript_87792.nnic	chr17	-	3606	15	NNC	ENSG00000161714.12	novel	6132	15	NA	NA	-26	654	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	10.662015354921	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCGCCACTCCCTGAGCA	-45131873	True	NA	-10	True	AATAAA	-18	NA	45132544	45111648	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_45112705_45112862_45113013_45113121_45113258_45113438_45113606_45114249_45114502_45115093_45115245_45115343_45115491_45116631_45116785_45117993_45118139_45118290_45118493_45118814_45119044_45120324_45120455_45120901_45121131_45121210_45121373_45132247
transcript_87797.nic	chr17	-	3293	14	NIC	ENSG00000161714.12	novel	6132	15	NA	NA	-1	651	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	11.5482010177154	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCACCGCCACTCCCTGA	-45131848	True	NA	-13	True	AATAAA	-15	NA	45132519	45111651	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_45112705_45113121_45113258_45113438_45113606_45114249_45114367_45115093_45115245_45115343_45115491_45116631_45116785_45117993_45118139_45118290_45118493_45118814_45119044_45120324_45120455_45120901_45121131_45121210_45121373_45132247
transcript_87801.known	chr17	+	1998	12	FSM	ENSG00000181513.15	ENST00000591859.5	1998	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	25.6878914781856	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGCTGTCTGGTCCCC	45132545	True	NA	12	True	AATAAA	-13	NA	45132630	45144176	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45132664_45135340_45135593_45135838_45135954_45136107_45136233_45136499_45136621_45136691_45136777_45137018_45137140_45137367_45137455_45137721_45137831_45137912_45137989_45139020_45139161_45143442
transcript_87803.known	chr17	+	2026	12	FSM	ENSG00000181513.15	ENST00000431281.5	2026	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	25.6878914781856	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTTCTGCTGTCTGGT	45132514	True	NA	8	True	AATAAA	-9	NA	45132599	45144172	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45132664_45135340_45135597_45135841_45135954_45136107_45136233_45136499_45136621_45136691_45136777_45137018_45137140_45137367_45137455_45137721_45137831_45137912_45137989_45139020_45139161_45143442
transcript_87807.known	chr17	+	1827	10	FSM	ENSG00000181513.15	ENST00000321854.13	1827	10	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_6	8.09663853432741	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGCTGTCTGGTCCCC	45134473	True	NA	12	True	AATAAA	-13	NA	45135686	45144176	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45135954_45136107_45136233_45136499_45136621_45136691_45136777_45137018_45137140_45137367_45137455_45137759_45137831_45137912_45137989_45139020_45139161_45143442
transcript_87808.known	chr17	+	1453	10	FSM	ENSG00000181513.15	ENST00000376955.8	1453	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	25.5255862921022	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCGACCTTGCTTTCCT	45134480	True	NA	2	True	NA	NA	NA	45135693	45142959	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45135954_45136107_45136233_45136499_45136621_45136691_45136777_45137018_45137140_45137367_45137455_45137759_45137831_45137922_45137989_45139020_45139161_45142582
transcript_87809.known	chr17	+	1986	9	FSM	ENSG00000181513.15	ENST00000398322.7	1986	9	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_5	7.99902337788808	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCTGGTCCCCTACGG	45134473	True	NA	17	True	AATAAA	-18	NA	45135686	45144181	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45136233_45136499_45136621_45136691_45136777_45137018_45137140_45137367_45137455_45137759_45137831_45137912_45137989_45139020_45139161_45143442
transcript_87810.known	chr17	-	1741	1	FSM	ENSG00000276728.1	ENST00000612013.1	1741	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTTCGTTCTTTTTATT	-45148460	False	NA	NA	False	NA	NA	NA	45148470	45146729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_45146700_45148500
transcript_87811.known	chr17	+	1528	4	FSM	ENSG00000168517.11	ENST00000307275.7	1528	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	45.6386775541195	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCTAGGATTGATTTCAC	45160680	True	NA	25	True	ATTAAA	-25	NA	45160699	45170040	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45160944_45162487_45162636_45162749_45162860_45169014
transcript_87814.known	chr17	+	1436	4	FSM	ENSG00000168517.11	ENST00000589230.6	1436	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	38.1255236758206	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGTATCTAGGATTGAT	45160917	True	NA	20	True	ATTAAA	-20	NA	45161874	45170035	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45162032_45162487_45162636_45162749_45162860_45169014
transcript_87816.known	chr17	+	1323	4	FSM	ENSG00000168517.11	ENST00000591070.6	1323	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	44.2743969153982	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGTATCTAGGATTGAT	45160938	True	NA	20	True	ATTAAA	-20	NA	45161895	45170035	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45161940_45162487_45162636_45162749_45162860_45169014
transcript_87818.known	chr17	+	1302	3	FSM	ENSG00000168517.11	ENST00000593138.6	1302	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	53	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGTATCTAGGATTGAT	45160901	True	NA	20	True	ATTAAA	-20	NA	45161077	45170035	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45161249_45162749_45162860_45169014
transcript_87819.known	chr17	+	1176	3	FSM	ENSG00000168517.11	ENST00000591576.5	1176	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	49	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGTATCTAGGATTGAT	45160937	True	NA	20	True	ATTAAA	-20	NA	45161894	45170035	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45161940_45162749_45162860_45169014
transcript_87821.known	chr17	+	1246	3	FSM	ENSG00000168517.11	ENST00000592695.1	1246	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	41	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGTATCTAGGATTGAT	45160959	True	NA	20	True	ATTAAA	-20	NA	45161916	45170035	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45162032_45162749_45162860_45169014
transcript_87823.known	chr17	+	3625	1	FSM	ENSG00000186834.4	ENST00000332499.4	3625	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTTTCTTCGTGTTTTTT	45147309	True	NA	25	True	ATTAAA	-15	NA	45148474	45152099	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45148500_45152100
transcript_87827.known	chr17	-	4442	16	FSM	ENSG00000006062.18	ENST00000344686.8	4442	16	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	5.2238768064426	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGGTGTCCTCTCTCTTGCC	NA	False	NA	2	True	AATAAA	-32	NA	45317020	45263118	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_45264801_45265162_45265264_45266536_45266682_45267091_45267199_45267405_45267760_45270412_45270564_45271057_45271222_45273502_45273608_45274122_45274255_45274463_45274594_45284811_45284950_45286430_45287046_45287153_45287365_45289235_45289306_45290489_45290766_45316959
transcript_87834.known	chr17	+	2175	4	FSM	ENSG00000267278.6	ENST00000655903.1	2175	4	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_2	1.63299316185545	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAATAAACTGGTAAATGT	45247474	True	NA	-16	True	NA	NA	NA	45247934	45269814	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45248004_45255134_45255219_45267112_45267329_45268008
transcript_87835.known	chr17	+	2191	4	FSM	ENSG00000267278.6	ENST00000657572.1	2191	4	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	12.3648246606609	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAATAAACTGGTAAATGT	45247455	True	NA	-16	True	NA	NA	NA	45247915	45269814	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45248004_45255137_45255219_45267112_45267329_45268008
transcript_87837.known	chr17	+	2090	3	FSM	ENSG00000267278.6	ENST00000590100.6	2090	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	9.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAATAAACTGGTAAATGT	45247475	True	NA	-16	True	NA	NA	NA	45247935	45269814	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45248004_45267112_45267329_45268008
transcript_87838.known	chr17	+	2296	3	FSM	ENSG00000267278.6	ENST00000586450.6	2296	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	7.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTAAATGTAAGGAAGTGT	NA	False	NA	-6	True	AATAAA	-2	NA	45262079	45269824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45262344_45267112_45267329_45268008
transcript_87840.nic	chr17	-	1307	3	ISM	ENSG00000006062.18	ENST00000344686.8	4442	16	-44	25261	-35	-23744	5prime_fragment	FALSE	canonical	3	15	junction_2	4	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGAGTTCAAGCTAGAAAC	NA	False	NA	NA	False	NA	NA	NA	45317064	45288379	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_45289306_45290489_45290766_45316959
transcript_87841.known	chr17	-	393	2	FSM	ENSG00000233483.3	ENST00000589518.1	393	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGGGCTGGGGCTTGCGG	-45247676	False	NA	-36	True	TATAAA	-21	NA	45247843	45247266	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_45247517_45247700
transcript_87843.known	chr17	+	2487	14	FSM	ENSG00000184922.15	ENST00000587489.5	2487	14	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	5.43275187169525	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCGCGTCGGCTCCATGC	NA	False	NA	7	True	AATAAA	-14	NA	45241074	45247318	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45241231_45241381_45241635_45241846_45242147_45242340_45242466_45243117_45243321_45243790_45244026_45244175_45244245_45244818_45244900_45244978_45245109_45245252_45245417_45245631_45245734_45245877_45245974_45246209_45246331_45246866
transcript_87851.known	chr17	-	3628	17	FSM	ENSG00000159314.12	ENST00000376922.6	3628	17	0	0	0	0	multi-exon	TRUE	canonical	3	26	junction_11	9.72753822917186	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGACAAATGTGTCTTG	-45425328	True	NA	-8	True	AATAAA	-18	NA	45425631	45393908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_45395634_45395743_45395850_45395982_45396118_45396206_45396285_45396486_45396586_45396667_45396791_45396915_45397025_45397948_45398048_45402713_45402819_45403618_45403710_45404028_45404097_45404268_45404335_45404444_45404529_45404600_45404682_45404923_45405107_45405675_45406084_45425563
transcript_87859.nic	chr17	-	3835	16	NIC	ENSG00000159314.12	novel	3628	17	NA	NA	-273	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_11	10.3593221571469	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGACAAATGTGTCTTG	NA	False	NA	-8	True	AATAAA	-18	NA	45425904	45393908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_45395634_45395743_45395850_45395982_45396118_45396206_45396285_45396486_45396586_45396667_45396791_45396915_45397025_45397948_45398048_45402713_45402819_45403618_45403710_45404028_45404097_45404444_45404529_45404600_45404682_45404923_45405107_45405675_45406084_45425563
transcript_87861.nic	chr17	-	3564	16	NIC	ENSG00000159314.12	novel	3628	17	NA	NA	-106	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_13	14.0275918579539	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGACAAATGTGTCTTG	NA	False	NA	-8	True	AATAAA	-18	NA	45425737	45393908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_45395634_45395743_45395850_45395982_45396118_45396206_45396285_45396486_45396586_45396667_45396791_45396915_45397025_45397948_45398048_45402713_45402819_45403618_45403710_45404028_45404097_45404444_45404529_45404600_45404682_45405027_45405107_45405675_45406084_45425563
transcript_8787.nic	chr1	-	2481	23	NIC	ENSG00000085998.15	novel	2543	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	89.6152012636286	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTTGTGATTGTGATT	-46195352	True	NA	-11	True	ATTAAA	-20	NA	46198457	46188682	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_46188981_46189241_46189358_46189457_46189568_46189853_46189990_46190472_46190518_46190719_46190785_46192097_46192224_46192307_46192437_46192517_46192591_46192899_46192959_46193173_46193216_46193304_46193389_46193563_46193640_46193854_46193926_46194273_46194402_46194552_46194652_46194843_46194962_46195810_46195925_46196011_46196078_46196730_46196850_46196969_46197085_46197701_46197872_46198335
transcript_87881.known	chr17	-	5240	12	FSM	ENSG00000225190.11	ENST00000430334.8	5240	12	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_7	5.510320894797	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCTGGCTTCTGAATTC	-45489588	True	NA	1	True	AGTAAA	-20	NA	45490721	45435899	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_45437970_45439476_45439635_45440162_45440227_45445469_45445664_45450617_45450764_45453354_45454273_45458168_45458440_45468208_45468594_45475099_45475727_45477899_45478148_45482436_45482526_45490651
transcript_87888.nic	chr17	-	3084	7	ISM	ENSG00000225190.11	ENST00000430334.8	5240	12	-59	17038	-31	0	5prime_fragment	FALSE	canonical	3	23	junction_2	5.46707315561891	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGTGCTGTCCAATAGAA	-45489647	True	NA	NA	False	TATAAA	-16	NA	45490780	45452937	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_45454273_45458168_45458440_45468208_45468594_45475099_45475727_45477899_45478148_45482436_45482526_45490651
transcript_87897.known	chr17	+	2695	15	FSM	ENSG00000263715.7	ENST00000634540.1	2695	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	65.8921505962894	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTGAAGGCCTGGACT	45614523	True	NA	7	True	TATAAA	-23	NA	45620343	45835826	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45620373_45621907_45622042_45629903_45630159_45807009_45807098_45816462_45816583_45821354_45821441_45829214_45829322_45830093_45830215_45830416_45830571_45830879_45830941_45833137_45833211_45833451_45833538_45833713_45833850_45834006_45834049_45834623
transcript_87907.known	chr17	+	546	4	FSM	ENSG00000204650.14	ENST00000585118.5	546	4	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_3	31.7909840468436	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACGAAGGCCTGAACTGG	45614507	True	NA	NA	False	NA	NA	NA	45620327	45636394	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45620373_45621907_45622042_45629903_45630159_45636282
transcript_87908.known	chr17	+	9678	4	FSM	ENSG00000204650.14	ENST00000591271.5	9678	4	0	0	0	0	multi-exon	TRUE	canonical	3	26	junction_3	82.6599459633665	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGATTTGCCAGAGAATTT	45614519	True	NA	NA	False	AATAAA	-19	NA	45620339	45655156	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45620373_45621907_45622042_45629903_45630159_45645900
transcript_87909.known	chr17	+	2609	4	FSM	ENSG00000204650.14	ENST00000455565.5	2609	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	79.9388655299925	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTAGCCTAGAGCTCGT	45614789	False	NA	19	True	AATAAA	-23	NA	45620609	45637959	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45621153_45621907_45622042_45629903_45630159_45636282
transcript_87911.known	chr17	+	718	3	FSM	ENSG00000204650.14	ENST00000582491.5	718	3	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	29	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTGTTTTTTGTTT	45614521	True	NA	NA	False	NA	NA	NA	45620341	45630456	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45620373_45621907_45622042_45629903
transcript_87912.known	chr17	+	1107	9	FSM	ENSG00000186868.17	ENST00000334239.12	1107	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	3.278719262151	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCGGTCAATAATTGTGGAG	45894657	False	NA	NA	False	NA	NA	NA	45894667	46024183	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45894687_45962320_45962471_45978374_45978441_45987039_45987096_45991459_45991587_45996398_45996665_46014242_46014325_46018617_46018731_46023955
transcript_87914.known	chr17	+	2537	13	FSM	ENSG00000120088.15	ENST00000314537.10	2537	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	4.48066835292336	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGAAGGCCTGGACTCC	NA	False	NA	9	True	TATAAA	-25	NA	45784319	45835828	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45784578_45807009_45807098_45816462_45816583_45821354_45821441_45829214_45829322_45830093_45830215_45830416_45830571_45830879_45830941_45833137_45833211_45833451_45833538_45833713_45833850_45834006_45834049_45834623
transcript_87915.known	chr17	+	1146	12	FSM	ENSG00000120088.15	ENST00000352855.9	1146	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.40125482818653	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGCAGGTCATGGAGCAG	NA	False	NA	NA	False	NA	NA	NA	45784526	45834764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_45784578_45807009_45807098_45821354_45821441_45829214_45829322_45830093_45830215_45830416_45830571_45830879_45830941_45833137_45833211_45833451_45833538_45833713_45833850_45834006_45834049_45834623
transcript_87917.known	chr17	-	5147	16	FSM	ENSG00000120071.15	ENST00000574590.6	5147	16	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	26.2937254872717	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGTACCAGGCCTTTC	NA	False	NA	-8	True	AATAAA	-17	NA	46225389	46029915	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_46031704_46032046_46032300_46033079_46033193_46033402_46033461_46034160_46034283_46038537_46038687_46039026_46039216_46039701_46039885_46050532_46050705_46066536_46066733_46067548_46067668_46082440_46082543_46094559_46094702_46170854_46172233_46223670_46223805_46225340
transcript_87921.known	chr17	-	5309	15	FSM	ENSG00000120071.15	ENST00000262419.10	5309	15	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_14	25.2146904054937	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGGAAAAATTGAAAAAAA	-46191619	False	NA	-48	True	NA	NA	NA	46192800	46029955	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_46031704_46032046_46032300_46033079_46033193_46033402_46033461_46034160_46034286_46038537_46038687_46039026_46039216_46039701_46039885_46050532_46050705_46066536_46066733_46067548_46067668_46082440_46082543_46094559_46094702_46170854_46172233_46192418
transcript_87922.known	chr17	-	4935	15	FSM	ENSG00000120071.15	ENST00000575318.6	4935	15	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	30.141249110798	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGTGTACCAGGCCTTT	-46223246	True	NA	-9	True	AATAAA	-16	NA	46225367	46029916	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_46031704_46032046_46032300_46033079_46033193_46033402_46033461_46034160_46034283_46038537_46038687_46039701_46039885_46050532_46050705_46066536_46066733_46067548_46067668_46082440_46082543_46094559_46094702_46170854_46172233_46223670_46223805_46225340
transcript_87924.known	chr17	-	5574	15	FSM	ENSG00000120071.15	ENST00000432791.7	5574	15	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_14	23.2919579709918	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGTACCAGGCCTTTC	-46192248	True	NA	-8	True	AATAAA	-17	NA	46193429	46029915	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_46031704_46032046_46032300_46033079_46033193_46033402_46033461_46034160_46034286_46038537_46038687_46039026_46039216_46039701_46039885_46050532_46050705_46066536_46066733_46067548_46067668_46082440_46082543_46094559_46094702_46170854_46172233_46192822
transcript_87925.known	chr17	-	5352	14	FSM	ENSG00000120071.15	ENST00000638275.1	5352	14	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_5	32.2860733528309	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGTGTACCAGGCCTTT	-46192219	True	NA	-9	True	AATAAA	-16	NA	46193400	46029916	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_46031704_46032046_46032300_46033079_46033193_46033402_46033461_46034160_46034283_46038537_46038687_46039701_46039885_46050532_46050705_46066536_46066733_46067548_46067668_46082440_46082543_46094559_46094702_46170854_46172233_46192822
transcript_87929.known	chr17	-	3392	8	FSM	ENSG00000120071.15	ENST00000639375.1	3392	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_7	21.4932357655489	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGCGTGGTGGCATATGT	-46223234	True	NA	NA	False	AATACA	-9	NA	46225355	46049398	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_46050705_46066536_46066733_46067548_46067668_46082440_46082543_46094559_46094702_46170854_46172233_46223670_46223805_46225340
transcript_87931.known	chr17	-	3365	4	FSM	ENSG00000120071.15	ENST00000638269.1	3365	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	24.3857882108958	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGCATAACAGAAATTGTAAA	-46223240	True	NA	NA	False	AAGAAA	-19	NA	46225361	46092869	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_46094702_46170854_46172233_46223670_46223805_46225340
transcript_87934.known	chr17	-	2655	2	FSM	ENSG00000120071.15	ENST00000639520.1	2655	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGCAAAACGAGAGAATTAA	-46223255	True	NA	NA	False	AGTAAA	-14	NA	46225376	46221185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_46223805_46225340
transcript_87936.known	chr17	+	517	2	FSM	ENSG00000214401.5	ENST00000398275.5	527	2	8	2	8	-2	multi-exon	FALSE	canonical	3	13	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGATTGAGTTCTAATGTT	NA	False	NA	NA	False	AATAAA	-15	NA	46193575	46196721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_46193739_46196367
transcript_87937.known	chr17	+	483	1	FSM	ENSG00000261575.3	ENST00000570002.2	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGAAACTGAGCTGAATG	NA	False	NA	9	True	AATAAA	-24	NA	46267036	46267519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_46267000_46267500
transcript_87941.known	chr17	-	1140	5	FSM	ENSG00000228696.10	ENST00000570618.5	1140	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	136.208250484323	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAGAAAGCAAGAAACA	NA	False	NA	NA	False	ATTAAA	-10	NA	46361764	46274783	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_46275419_46299525_46299666_46352819_46352931_46358249_46358415_46361675
transcript_87943.nnic	chr17	-	2389	5	NIC	ENSG00000228696.10	novel	5240	4	NA	NA	-1	7	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	116.754014920259	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATCCAGTTTCTAAAATT	NA	False	NA	NA	False	AATAAA	-24	NA	46361746	46309499	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_46311276_46339508_46339775_46352819_46352931_46358249_46358415_46361675
transcript_87944.known	chr17	-	731	5	FSM	ENSG00000228696.10	ENST00000575960.5	731	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	93.6919820475584	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGCTGTCAAAAAAGAAGAG	NA	False	NA	NA	False	NA	NA	NA	46361718	46330452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_46330599_46339508_46339775_46352819_46352931_46358249_46358415_46361675
transcript_87949.known	chr17	-	5240	4	FSM	ENSG00000228696.10	ENST00000450673.4	5240	4	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	58.7669597270061	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGTTATATTGTACT	NA	False	NA	NA	False	AATAAA	-24	NA	46361766	46334901	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_46339775_46352819_46352931_46358249_46358415_46361675
transcript_87958.nnic	chr17	-	770	5	NNC	ENSG00000185829.18	novel	798	5	NA	NA	-23	12332	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	123.103614894121	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAGTTGAGGTGTTCTAT	-46579693	False	NA	NA	False	AATAAA	-24	NA	46579714	46504369	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_46504610_46517093_46517234_46570758_46570870_46576174_46576340_46579600
transcript_87959.nnic	chr17	-	2422	5	NNC	ENSG00000185829.18	novel	5242	4	NA	NA	-23	1591	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	119.064058388751	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAAGTCATCCAGTTTCT	-46579693	False	NA	NA	False	AATAAA	-18	NA	46579714	46527093	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_46528860_46557364_46557631_46570758_46570870_46576174_46576340_46579600
transcript_87963.known	chr17	-	524	4	FSM	ENSG00000185829.18	ENST00000622488.6	524	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	134.71038894194	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGGTGTGATCTTGGCT	-46579652	False	NA	NA	False	NA	NA	NA	46579673	46528684	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_46528860_46570758_46570870_46576174_46576340_46579600
transcript_87964.known	chr17	-	5242	4	FSM	ENSG00000185829.18	ENST00000336125.6	5242	4	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	61.4220373047546	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGTTATATTGTACT	-46579670	False	NA	NA	False	AATAAA	-24	NA	46579691	46552755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_46557631_46570758_46570870_46576174_46576340_46579600
transcript_87968.known	chr17	-	798	5	FSM	ENSG00000185829.18	ENST00000445552.6	798	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	135.263400445205	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAATCTCTCTTGCTTGGA	-46579649	False	NA	NA	False	AATAAA	-22	NA	46579670	46516701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_46517014_46517093_46517234_46570758_46570870_46576174_46576340_46579600
transcript_87969.known	chr17	-	491	4	FSM	ENSG00000185829.18	ENST00000570550.5	491	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	137.995974176383	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAGGAAACCTGAGTCC	-46579636	False	NA	NA	False	AATAAA	-18	NA	46579657	46552532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_46552691_46570758_46570870_46576174_46576340_46579600
transcript_87970.known	chr17	+	3983	21	FSM	ENSG00000073969.18	ENST00000398238.8	3983	21	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_15	33.1012084371553	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTAGACCAGTGTTT	NA	False	NA	12	True	AATAAA	-20	NA	46590668	46757464	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_46590788_46624243_46624330_46626612_46626713_46630410_46630451_46637375_46637543_46640053_46640162_46640642_46640719_46643103_46643260_46674413_46674614_46692902_46693069_46693846_46693922_46694474_46694663_46704758_46704855_46710962_46711120_46713852_46713987_46726548_46726616_46728854_46728935_46749772_46749908_46751502_46751617_46755313_46755370_46755801
transcript_87974.known	chr17	-	586	1	FSM	ENSG00000213326.4	ENST00000484240.1	586	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAAATGGCTAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	46722167	46721581	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_46721600_46722200
transcript_87975.known	chr17	-	3287	5	FSM	ENSG00000108379.10	ENST00000225512.6	3287	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	2.69258240356725	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATACATTGTACACTGTG	NA	False	NA	-13	True	ATTAAA	-23	NA	46818692	46762505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_46764622_46768311_46768800_46769782_46770049_46773667_46773910_46818517
transcript_87984.known	chr17	+	4972	4	FSM	ENSG00000158955.11	ENST00000290015.7	4972	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.816496580927726	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTTTGTCTCAATTTAT	46851572	True	NA	NA	False	AATAAA	-29	NA	46851582	46880560	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_46851716_46872516_46872774_46875100_46875367_46876244
transcript_87985.nic	chr17	+	970	6	ISM	ENSG00000262633.2	ENST00000639822.1	1564	8	-32	82936	-5	-80158	5prime_fragment	FALSE	canonical	3	40	junction_4	134.429758610213	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGTGTGAAGTCCCTTG	46917715	True	NA	15	True	ATTAAA	-15	NA	46923127	46966996	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_46923222_46929519_46929585_46931098_46931208_46932066_46932200_46938598_46938705_46966533
transcript_87987.known	chr17	+	2452	8	FSM	ENSG00000108433.17	ENST00000640792.1	2452	8	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_6	143.233076786454	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTTCTTCCTTGTGTTTT	NA	False	NA	-34	True	NA	NA	NA	46923080	46966947	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_46923222_46929519_46929585_46931098_46931208_46932066_46932200_46935028_46935170_46938598_46938705_46963696_46965040_46966533
transcript_87989.known	chr17	+	1245	7	FSM	ENSG00000108433.17	ENST00000225567.9	1245	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	120.117188149277	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTACATGGACATTTACTT	46917707	True	NA	NA	False	TTTAAA	-36	NA	46923119	46941143	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_46923222_46929519_46929585_46931098_46931208_46932066_46932200_46935028_46935170_46938598_46938705_46940554
transcript_87991.known	chr17	+	2313	8	FSM	ENSG00000108433.17	ENST00000640358.1	2313	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_6	142.107317883065	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTGATTTCTGTGATG	46917704	True	NA	1	True	ATTAAA	-1	NA	46923116	46966982	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_46923222_46929519_46929585_46931098_46931208_46932066_46932200_46935028_46935170_46938598_46938705_46963834_46965040_46966533
transcript_87993.known	chr17	+	1115	7	FSM	ENSG00000108433.17	ENST00000573224.2	1115	7	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_6	85.479854676734	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGAAGTCCCTTGAAAG	46917715	True	NA	19	True	ATTAAA	-19	NA	46923127	46967000	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_46923222_46929519_46929585_46931098_46931208_46932066_46932200_46935028_46935170_46938598_46938705_46966533
transcript_87995.known	chr17	+	2683	6	FSM	ENSG00000108433.17	ENST00000638374.1	2683	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	122.724080766572	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGCAGAGGTGGTTTT	46917751	True	NA	-3	True	NA	NA	NA	46923163	46940779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_46923222_46929523_46929585_46931098_46931208_46932066_46932200_46935028_46935170_46938598
transcript_88.known	SIRV2	-	2051	11	FSM	SIRV2A	SIRV201	2051	11	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_6	1137.82325516752	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCCCAACGTGGCATGCG	NA	False	NA	NA	False	NA	NA	NA	5907	1000	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV2_-_1662_1741_1854_1973_2065_2674_2803_2881_3011_3105_3375_3665_3826_3966_4095_4338_4480_4687_4801_5788
transcript_880.nic	chr1	-	4106	11	NIC	ENSG00000221978.13	novel	2815	12	NA	NA	-58	0	intron_retention	FALSE	canonical	3	846	junction_6	122.861263219943	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTTAAAGCTATGTATGAA	-1399383	False	NA	-27	True	AATAAA	-15	NA	1399393	1386712	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_1387583_1387776_1387870_1387953_1388066_1390229_1390372_1390458_1390564_1390765_1392804_1393395_1393461_1395393_1395515_1398232_1398343_1398596_1398672_1399018
transcript_88002.known	chr17	+	3574	6	FSM	ENSG00000108433.17	ENST00000638216.1	3574	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	119.25166665502	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGCTCTGTCACCCAGGC	46917733	True	NA	NA	False	TTTAAA	-42	NA	46923145	46941600	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_46923270_46929519_46929585_46931098_46931208_46932066_46932200_46935028_46935170_46938598
transcript_88008.known	chr17	+	885	5	FSM	ENSG00000108433.17	ENST00000639031.1	885	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	137.168691763099	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTTTTGTATTTTAGT	46917785	True	NA	NA	False	NA	NA	NA	46923197	46935586	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_46923222_46929523_46929585_46931098_46931208_46932066_46932200_46935028
transcript_88012.known	chr17	+	3808	5	FSM	ENSG00000108433.17	ENST00000638892.1	3808	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	157.356879417457	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCTTAGTCCAAAAAAGATT	46917725	True	NA	8	True	AATAAA	-20	NA	46923137	46942019	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_46923222_46929523_46929585_46931098_46931208_46932066_46932200_46938598
transcript_88013.known	chr17	+	2190	5	FSM	ENSG00000108433.17	ENST00000640269.1	2190	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	133.306742140073	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTGATCTCTGATGGCA	46917747	True	NA	-6	True	AATACA	-8	NA	46923159	46936801	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_46923270_46929519_46929585_46931098_46931208_46932066_46932200_46935028
transcript_88015.known	chr17	+	661	5	FSM	ENSG00000108433.17	ENST00000640806.1	661	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	143.179956697856	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGACCTTGAAGGTGGG	46917747	True	NA	NA	False	NA	NA	NA	46923159	46935154	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_46923388_46929519_46929585_46931098_46931208_46932066_46932200_46935028
transcript_88016.known	chr17	+	1444	4	FSM	ENSG00000108433.17	ENST00000575949.6	1444	4	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_3	12.684198393627	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTCCTGGTCATTCTAC	46917740	True	NA	9	True	AATAAA	-21	NA	46923152	46933267	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_46923222_46929519_46929585_46931098_46931208_46932066
transcript_88019.known	chr17	+	2679	3	FSM	ENSG00000108433.17	ENST00000640709.1	2679	3	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_1	4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTTTTTTTTTTTTGGA	46917725	True	NA	NA	False	AAGAAA	-11	NA	46923137	46933628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_46923222_46929519_46929585_46931098
transcript_8802.known	chr1	-	2719	22	FSM	ENSG00000085998.15	ENST00000371984.8	2719	22	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_1	36.6534298927467	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTTGTGATTGTGATT	-46195329	True	NA	-11	True	ATTAAA	-20	NA	46198434	46188682	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_46189358_46189457_46189568_46189853_46189990_46190472_46190518_46190719_46190785_46192097_46192224_46192307_46192437_46192517_46192591_46192899_46192959_46193173_46193216_46193304_46193389_46193563_46193640_46193854_46193926_46194273_46194402_46194552_46194652_46194843_46194962_46195810_46195925_46196011_46196078_46196730_46196850_46196969_46197085_46197701_46197872_46198335
transcript_88022.known	chr17	-	2979	5	FSM	ENSG00000262879.6	ENST00000653193.1	2979	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.30116263352131	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGGTGAAACTCCATCTC	NA	False	NA	NA	False	NA	NA	NA	47067537	47016148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47018466_47021581_47021722_47033277_47033382_47056459_47056754_47067413
transcript_88023.known	chr17	-	1114	3	FSM	ENSG00000262879.6	ENST00000667718.1	1114	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTCCGTAGTTAAAATTC	-47067291	True	NA	NA	False	CATAAA	-20	NA	47067481	47053461	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47054214_47056459_47056754_47067413
transcript_88024.known	chr17	-	5940	3	FSM	ENSG00000262879.6	ENST00000573341.6	5940	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	8	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGAACTTATTTTGTGAG	-47099028	True	NA	NA	False	NA	NA	NA	47100248	47051315	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47056754_47072471_47072560_47099834
transcript_88027.known	chr17	-	633	2	FSM	ENSG00000262879.6	ENST00000670987.1	633	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCATTTTGGATGTGTG	-47067309	True	NA	-6	True	NA	NA	NA	47067499	47056206	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47056754_47067413
transcript_88029.known	chr17	-	1098	1	FSM	ENSG00000179673.5	ENST00000322329.5	1098	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCGCCTGTGAGGTGTGT	-46978894	True	NA	-6	True	AATAAA	-33	NA	46979253	46978155	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_46978200_46979300
transcript_88030.known	chr17	-	2579	19	FSM	ENSG00000004897.12	ENST00000527547.5	2579	19	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_8	23.2893765852243	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCTCTGTATACTGAGT	-47186817	True	NA	NA	False	NA	NA	NA	47189224	47120879	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47121018_47122443_47122601_47123885_47123961_47129392_47129522_47132256_47132375_47137151_47137361_47138738_47138892_47141852_47142023_47142228_47142437_47143882_47143983_47151805_47151919_47154671_47154787_47156912_47157125_47157229_47157385_47158205_47158304_47169916_47170043_47171916_47172065_47181561_47181638_47189145
transcript_88031.known	chr17	-	3177	19	FSM	ENSG00000004897.12	ENST00000531206.5	3177	19	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_11	42.6695962535907	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGATCATTGTTGTCTT	-47186769	False	NA	-6	True	NA	NA	NA	47189176	47120254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47121018_47122443_47122601_47123885_47123961_47129392_47129522_47132256_47132375_47137151_47137361_47138738_47138892_47141852_47142026_47142228_47142437_47143882_47143983_47151805_47151937_47154671_47154787_47156912_47157125_47157229_47157385_47158205_47158304_47169916_47170043_47171916_47172065_47181561_47181638_47189145
transcript_88032.known	chr17	-	2570	18	FSM	ENSG00000004897.12	ENST00000533415.5	2570	18	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_16	43.1089390131255	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGTGCAATATTTAGCTG	-47186844	True	NA	NA	False	AATGAA	-2	NA	47189251	47120770	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47121018_47122443_47122601_47123885_47123961_47129392_47129522_47132256_47132375_47137151_47137361_47138738_47138892_47141852_47142026_47142228_47142437_47143882_47143983_47151805_47151919_47154671_47154787_47156912_47157125_47157229_47157385_47158205_47158304_47169916_47170043_47181561_47181638_47189145
transcript_88033.nic	chr17	-	1397	11	ISM	ENSG00000004897.12	ENST00000527547.5	2579	19	-114	21496	-43	52	5prime_fragment	FALSE	canonical	3	105	junction_5	16.9673215328761	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAAACTAATAAAGGAGGA	-47186931	True	NA	19	True	ATTAAA	-42	NA	47189338	47142375	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_47142437_47143882_47143983_47151805_47151919_47154671_47154787_47156912_47157125_47157229_47157385_47158205_47158304_47169916_47170043_47171916_47172065_47181561_47181638_47189145
transcript_88036.nic	chr17	-	1336	10	ISM	ENSG00000004897.12	ENST00000527547.5	2579	19	-114	23003	-43	0	5prime_fragment	FALSE	canonical	3	105	junction_4	17.4547032821147	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATTTAAAGATTTCTGTA	-47186931	True	NA	NA	False	NA	NA	NA	47189338	47143882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_47143983_47151805_47151919_47154671_47154787_47156912_47157125_47157229_47157385_47158205_47158304_47169916_47170043_47171916_47172065_47181561_47181638_47189145
transcript_88049.nnic	chr17	-	763	4	FSM	ENSG00000228782.8	ENST00000691039.1	736	4	-32	5	-32	-5	multi-exon	FALSE	canonical	3	31	junction_1	83.4159590379576	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTTCCTGCTTAGAACT	NA	False	NA	-5	True	AATAAA	-16	NA	47492524	47488631	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47488956_47490165_47490296_47491014_47491193_47492393
transcript_88051.known	chr17	-	473	4	FSM	ENSG00000228782.8	ENST00000573318.1	473	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_3	69.5333652924184	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGAACTCCCTACCTT	-47491861	True	NA	NA	False	AAAAAG	-41	NA	47492459	47482991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47483091_47490165_47490296_47491014_47491193_47492393
transcript_8806.nic	chr1	-	2363	22	FSM	ENSG00000085998.15	ENST00000692369.1	2361	22	1	-3	1	0	multi-exon	FALSE	canonical	3	10	junction_1	95.5516742343094	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTCTTGTGATTGTGAT	-46195351	True	NA	-12	True	ATTAAA	-19	NA	46198456	46188683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_46188981_46189457_46189568_46189853_46189990_46190472_46190518_46190719_46190785_46192097_46192224_46192307_46192437_46192517_46192591_46192899_46192959_46193173_46193216_46193304_46193389_46193563_46193640_46193854_46193926_46194273_46194402_46194552_46194652_46194843_46194962_46195810_46195925_46196011_46196078_46196730_46196850_46196969_46197085_46197701_46197872_46198335
transcript_88061.known	chr17	+	3758	24	FSM	ENSG00000141279.17	ENST00000677120.1	3758	24	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_23	103.996837235608	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGCGAGACTGTCTCAAAA	47529471	False	NA	NA	False	NA	NA	NA	47531221	47624665	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_47531556_47545908_47545994_47569416_47569495_47579389_47579512_47582741_47582850_47585499_47585701_47586147_47586245_47586364_47586399_47587229_47587345_47590716_47590882_47591955_47592061_47592484_47592546_47596352_47596463_47599675_47599740_47601607_47601748_47603914_47604050_47605332_47605553_47612459_47612603_47613668_47613726_47618349_47618458_47619008_47619165_47619736_47619785_47621767_47621971_47623796
transcript_88073.known	chr17	+	4309	23	FSM	ENSG00000141279.17	ENST00000322157.9	4309	23	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_7	54.5553778852126	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGATTCACTTTATTC	NA	False	NA	24	True	AATAAA	-20	NA	47531107	47623276	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_47531556_47545908_47545994_47569416_47569495_47579389_47579512_47582741_47582850_47585499_47585701_47586147_47586245_47586364_47586399_47587229_47587345_47590716_47590882_47591955_47592061_47592484_47592546_47596352_47596463_47599675_47599740_47601607_47601748_47603914_47604050_47605332_47605553_47612459_47612603_47613668_47613726_47618349_47618458_47619008_47619165_47619736_47619785_47621767
transcript_88089.known	chr17	+	4252	22	FSM	ENSG00000141279.17	ENST00000678461.1	4252	22	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	106.866840235641	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATGTCCTGATTCACTT	NA	False	NA	19	True	AATAAA	-15	NA	47531107	47623271	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_47531556_47545908_47545994_47569416_47569495_47579389_47579512_47582741_47582850_47585499_47585746_47586364_47586399_47587229_47587345_47590716_47590882_47591955_47592061_47592484_47592546_47596352_47596463_47599675_47599740_47601607_47601748_47603914_47604050_47605332_47605553_47612459_47612603_47613668_47613726_47618349_47618458_47619008_47619165_47619736_47619785_47621767
transcript_88108.known	chr17	+	1749	12	FSM	ENSG00000141279.17	ENST00000532729.6	1749	12	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_7	62.9213072741731	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTTCAGGTTGAATAT	NA	False	NA	NA	False	AATAAA	-20	NA	47531107	47592675	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_47531556_47545908_47545994_47569416_47569495_47579389_47579512_47582741_47582850_47585499_47585701_47586147_47586245_47586364_47586399_47587229_47587345_47590716_47590882_47591955_47592061_47592484
transcript_88109.known	chr17	-	442	4	FSM	ENSG00000263766.6	ENST00000584391.6	786	4	29	315	-4	-315	multi-exon	FALSE	canonical	3	13	junction_2	3.39934634239519	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGCAGAATATTTTCACA	-47649363	False	41	NA	False	NA	NA	NA	47649420	47621841	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47622088_47626546_47626628_47636511_47636602_47649395
transcript_88114.known	chr17	+	6182	23	FSM	ENSG00000108424.11	ENST00000583648.6	6182	23	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	299.495747013775	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTGCTGCTTTTTTTTT	47649398	True	NA	19	True	AATAAA	-24	NA	47649494	47685505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_47649878_47650177_47650285_47650385_47650445_47652693_47652877_47656859_47657061_47658507_47658661_47661118_47661179_47663088_47663179_47664158_47664270_47665056_47665159_47668185_47668411_47669677_47669870_47670701_47670833_47673017_47673166_47673489_47673562_47674637_47674783_47676408_47676492_47677019_47677128_47678045_47678190_47678307_47678414_47680019_47680135_47680507_47680670_47682403
transcript_88121.known	chr17	+	6058	22	FSM	ENSG00000108424.11	ENST00000290158.9	6058	22	0	0	0	0	multi-exon	FALSE	canonical	3	825	junction_1	183.455951573669	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTGCTGCTTTTTTTTT	47642119	True	NA	19	True	AATAAA	-24	NA	47649918	47685505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_47650285_47650385_47650445_47652693_47652877_47656859_47657061_47658507_47658661_47661118_47661179_47663088_47663179_47664158_47664270_47665056_47665159_47668185_47668411_47669677_47669870_47670701_47670833_47673017_47673166_47673489_47673562_47674637_47674783_47676408_47676492_47677019_47677128_47678045_47678190_47678307_47678414_47680019_47680135_47680507_47680670_47682403
transcript_88138.known	chr17	+	2989	21	FSM	ENSG00000108424.11	ENST00000540627.5	2989	21	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	300.38230224166	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAAGAAAGTT	47650941	False	NA	-21	True	AAAACA	-17	NA	47651195	47682680	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_47651377_47652693_47652877_47656859_47657061_47658507_47658661_47661118_47661179_47663088_47663179_47664158_47664270_47665056_47665159_47668185_47668411_47669677_47669870_47670701_47670833_47673017_47673166_47673489_47673562_47674637_47674783_47676408_47676492_47677019_47677128_47678045_47678190_47678307_47678414_47680019_47680135_47680507_47680670_47682403
transcript_88157.nic	chr17	+	3444	10	FSM	ENSG00000198933.10	ENST00000578982.6	3342	10	-104	2	-104	0	multi-exon	FALSE	canonical	2	6	junction_1	5.17353187858792	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTGCTCAATCTGTGC	47693369	True	NA	31	True	AATAAA	-13	NA	47694056	47712050	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_47694195_47696078_47696338_47696710_47696834_47697088_47697194_47698594_47698776_47699319_47699496_47699635_47699698_47708393_47708513_47708724_47709453_47710497
transcript_88158.nic	chr17	+	3417	10	NIC	ENSG00000198933.10	novel	4121	9	NA	NA	-66	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_8	4.26296135405575	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTGCTCAATCTGTGC	47694061	True	NA	31	True	AATAAA	-13	NA	47694552	47712050	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_47694664_47696078_47696338_47696710_47696834_47697088_47697194_47698594_47698776_47699319_47699496_47699635_47699698_47708393_47708513_47708724_47709453_47710497
transcript_88165.known	chr17	+	2583	6	FSM	ENSG00000073861.3	ENST00000177694.2	2583	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTGCCTCAGTGCCAG	NA	False	NA	NA	False	AATAAA	-16	NA	47733235	47746122	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_47733946_47742609_47742765_47743070_47743193_47744194_47744354_47744481_47744544_47744747
transcript_88166.known	chr17	-	3664	23	FSM	ENSG00000006025.12	ENST00000007414.8	3664	23	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_6	5.1492196311594	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGCCTGTGACCATTCA	-47817583	False	4211	-12	True	AATAAA	-13	NA	47821794	47807371	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47808400_47808537_47808661_47808863_47808991_47809075_47809221_47809333_47809479_47810593_47810673_47810771_47810836_47813265_47813404_47813586_47813835_47814520_47814615_47815214_47815353_47816106_47816203_47816387_47816483_47816562_47816696_47816779_47816873_47817255_47817360_47818268_47818387_47818505_47818617_47818985_47819100_47819728_47819783_47819970_47820097_47820203_47820366_47821665
transcript_88172.known	chr17	-	1622	6	FSM	ENSG00000159111.13	ENST00000414011.1	1622	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	287.255565655393	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGCTTTATAATAAAATGAA	-47827323	True	NA	-50	True	NA	NA	NA	47831534	47823489	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47824459_47826636_47826782_47827039_47827205_47828500_47828671_47829138_47829237_47831459
transcript_88173.known	chr17	-	1576	5	FSM	ENSG00000159111.13	ENST00000421763.5	1576	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	256.321453452496	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTACCCAGAAGTGGGTCC	-47827319	True	NA	NA	False	NA	NA	NA	47831530	47823582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47824459_47826636_47826782_47827039_47827205_47828500_47828671_47831310
transcript_88174.known	chr17	-	1749	5	FSM	ENSG00000159111.13	ENST00000351111.7	1749	5	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_4	51.7904431338447	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAACGTGTCTCTGGTGGT	-47827330	True	NA	-3	True	ATTAAA	-25	NA	47831541	47823271	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47824459_47826636_47826782_47827039_47827205_47828500_47828671_47831459
transcript_88179.nic	chr17	-	1522	8	NIC	ENSG00000141295.14	novel	1496	8	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_7	107.78606929791	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCAGTGAACTTTATCCC	-47838300	True	NA	-9	True	AATAAA	-15	NA	47841276	47837691	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_47838003_47838269_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840190_47840373_47840669_47840844_47841184
transcript_88180.known	chr17	-	1496	8	FSM	ENSG00000141295.14	ENST00000290216.14	1496	8	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_7	41.3294380433559	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCAGTGAACTTTATCCC	-47838297	True	NA	-9	True	AATAAA	-15	NA	47841273	47837691	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47838003_47838269_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840190_47840373_47840669_47840844_47841207
transcript_88182.known	chr17	-	1477	8	FSM	ENSG00000141295.14	ENST00000581645.5	1477	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	120.068687824588	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGCTTTATTTTCTCTT	-47838271	True	NA	-25	True	NA	NA	NA	47841247	47837707	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47838003_47838269_47838451_47838530_47838720_47838790_47839007_47839443_47839644_47840190_47840373_47840669_47840844_47841207
transcript_88185.nic	chr17	-	1406	8	NIC	ENSG00000141295.14	novel	1496	8	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	105.335421489678	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCCTTAATAAATGTGCT	-47838301	True	NA	-37	True	NA	NA	NA	47841277	47837719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_47838003_47838335_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840190_47840373_47840669_47840844_47841207
transcript_88194.known	chr17	-	1779	7	FSM	ENSG00000141295.14	ENST00000407215.7	1779	7	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_6	44.0898703407786	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCAGTGAACTTTATCCC	-47838313	True	NA	-9	True	AATAAA	-15	NA	47841289	47837691	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840190_47840373_47840669_47840844_47841207
transcript_88210.known	chr17	-	952	6	FSM	ENSG00000141295.14	ENST00000579856.5	952	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	132.739444024751	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGGACACCAGGCAGCCC	-47838289	True	NA	NA	False	NA	NA	NA	47841265	47838312	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840669_47840844_47841207
transcript_88213.nic	chr17	-	2320	6	NIC	ENSG00000141295.14	novel	1779	7	NA	NA	-4	0	intron_retention	FALSE	canonical	3	248	junction_5	48.2476942454248	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCAGTGAACTTTATCCC	-47838307	True	NA	-9	True	AATAAA	-15	NA	47841283	47837691	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_47838451_47838530_47838697_47838790_47839007_47839443_47840373_47840669_47840844_47841207
transcript_88238.nic	chr17	-	2393	5	NIC	ENSG00000141295.14	novel	1779	7	NA	NA	-3	0	intron_retention	FALSE	canonical	3	248	junction_4	40.6655566788406	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCAGTGAACTTTATCCC	-47838300	True	NA	-9	True	AATAAA	-15	NA	47841276	47837691	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_47838697_47838790_47839007_47839443_47840373_47840669_47840844_47841207
transcript_88258.known	chr17	-	717	3	FSM	ENSG00000141295.14	ENST00000580428.1	717	3	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_2	50.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGGGGCTCAGGACACTT	-47838303	True	NA	NA	False	TATAAA	-40	NA	47841279	47839901	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47840373_47840669_47840844_47841207
transcript_88260.known	chr17	-	1237	2	FSM	ENSG00000141295.14	ENST00000581546.1	1237	2	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCTCTTTTGCCAGGCT	-47838285	True	NA	NA	False	NA	NA	NA	47841261	47839660	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47840844_47841207
transcript_88261.known	chr17	-	1745	7	FSM	ENSG00000141295.14	ENST00000584123.5	1745	7	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_1	25.0094426611674	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCTTTATTTTCTCTTC	-47838197	True	NA	-24	True	NA	NA	NA	47841173	47837706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47838003_47838269_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840190_47840373_47840669
transcript_88262.known	chr17	-	3824	2	FSM	ENSG00000189120.5	ENST00000536300.2	3824	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTTGTGTTCCAGCTC	-47851034	True	NA	-4	True	AATAAA	-19	NA	47851163	47844907	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47848487_47850918
transcript_88264.known	chr17	-	522	3	FSM	ENSG00000264920.3	ENST00000691236.1	557	3	25	10	4	0	multi-exon	FALSE	canonical	3	27	junction_1	1.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGTGGCATAACTGGTGC	-47895518	True	NA	NA	False	ATTAAA	-43	NA	47895812	47891228	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47891582_47893899_47893959_47895702
transcript_88268.known	chr17	+	3026	7	FSM	ENSG00000167182.16	ENST00000376741.5	3026	7	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	18.8628087928483	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCAGTTCGGCTTCCTT	47894565	True	NA	12	True	AATAAA	-28	NA	47896235	47928957	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_47896294_47915311_47915389_47916155_47917131_47922961_47923275_47924918_47925094_47925347_47925542_47927723
transcript_88278.known	chr17	+	1862	14	FSM	ENSG00000108465.15	ENST00000584991.5	1862	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	152.197473717264	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCGGACTTAATAAAAGAGG	47963679	True	NA	-4	True	NA	NA	NA	47971048	47981741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_47971153_47971361_47971408_47973518_47973651_47973930_47974036_47974399_47974449_47975158_47975338_47975513_47975654_47975868_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436
transcript_88306.nic	chr17	+	2878	12	NIC	ENSG00000108465.15	novel	2519	13	NA	NA	-23	0	intron_retention	FALSE	canonical	0	0	junction_4	154.187821495476	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCTTCAGTACTGACAG	NA	False	NA	23	True	AATAAA	-13	NA	47970984	47981768	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_47971153_47971361_47971408_47973518_47973651_47973930_47974036_47974399_47975338_47975513_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436
transcript_88309.nic	chr17	+	2921	12	NIC	ENSG00000108465.15	novel	2519	13	NA	NA	-23	0	intron_retention	FALSE	canonical	0	0	junction_4	195.808558892448	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCTTCAGTACTGACAG	NA	False	NA	23	True	AATAAA	-13	NA	47970984	47981768	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_47971153_47971361_47971408_47973518_47973694_47973930_47974036_47974399_47975338_47975513_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436
transcript_88323.nic	chr17	+	3158	11	NIC	ENSG00000108465.15	novel	2519	13	NA	NA	-23	0	intron_retention	FALSE	canonical	0	0	junction_3	161.651136711129	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCTTCAGTACTGACAG	NA	False	NA	23	True	AATAAA	-13	NA	47970984	47981768	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_47971153_47971361_47971408_47973518_47974036_47974399_47975338_47975513_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436
transcript_88334.known	chr17	+	3417	7	FSM	ENSG00000108439.11	ENST00000642017.2	3417	7	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	9.7082439194738	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTTCAACCCGGCCTG	47940192	True	NA	22	True	AATAAA	-23	NA	47941570	47949308	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_47941814_47943305_47943431_47944615_47944716_47945558_47945613_47945860_47945990_47946322_47946394_47946613
transcript_88336.known	chr17	+	696	7	FSM	ENSG00000108439.11	ENST00000583599.6	696	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	31.5471428535489	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCACCGCGGGGAGGAAG	NA	False	NA	NA	False	NA	NA	NA	47941505	47946733	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_47941603_47943305_47943431_47944615_47944716_47945558_47945613_47945860_47945990_47946322_47946394_47946613
transcript_88338.known	chr17	+	3657	7	FSM	ENSG00000108439.11	ENST00000641323.1	3657	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	30.4599007804614	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTATCAGCCGTGCACTTT	47940169	True	NA	1	True	AATAAA	-2	NA	47941547	47949287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_47942052_47943305_47943431_47944615_47944716_47945558_47945613_47945860_47945990_47946322_47946394_47946613
transcript_88341.known	chr17	+	1196	6	FSM	ENSG00000108439.11	ENST00000434554.7	1196	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	33.9293383371972	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAAAGCTTAGTCCTAGC	47940192	True	NA	NA	False	NA	NA	NA	47941570	47947141	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_47941814_47943305_47943431_47944615_47944716_47945860_47945990_47946322_47946394_47946613
transcript_88343.known	chr17	-	1524	2	FSM	ENSG00000167183.3	ENST00000300557.3	1524	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTCCTTTCAAGCTTCAG	-47957844	True	NA	NA	False	AGTAAA	-20	NA	47957883	47951966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_47953264_47957656
transcript_88344.known	chr17	+	2759	12	FSM	ENSG00000108465.15	ENST00000584063.5	2759	12	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_1	64.3913653674489	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCAGTACTGACAGTTCC	47963734	True	NA	27	True	AATAAA	-17	NA	47971103	47981772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_47971153_47971361_47971408_47973518_47973651_47973930_47974032_47974399_47975338_47975513_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436
transcript_88345.known	chr17	+	1834	14	FSM	ENSG00000108465.15	ENST00000338399.9	1834	14	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_7	93.568062118015	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACAGTTCCTTATGCTGC	47963743	True	NA	36	True	AATAAA	-26	NA	47971112	47981781	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_47971153_47971361_47971408_47973518_47973651_47973930_47974032_47974399_47974449_47975158_47975338_47975513_47975654_47975868_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436
transcript_88346.known	chr17	+	2519	13	FSM	ENSG00000108465.15	ENST00000585163.5	2519	13	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_6	85.905430885105	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCTTCAGTACTGACAG	47963755	True	NA	23	True	AATAAA	-13	NA	47971124	47981768	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_47971153_47971361_47971408_47973518_47973651_47973930_47974032_47974399_47975338_47975513_47975654_47975868_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436
transcript_88347.known	chr17	+	2609	13	FSM	ENSG00000108465.15	ENST00000580287.5	2609	13	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_12	139.174850058798	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCAGTACTGACAGTTCC	47963757	True	NA	27	True	AATAAA	-17	NA	47971126	47981772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_47971153_47971361_47971408_47973518_47973651_47973930_47974032_47974399_47975338_47975513_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436_47981460_47981586
transcript_88348.known	chr17	+	1768	13	FSM	ENSG00000108465.15	ENST00000580670.6	1768	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	188.918614899526	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAAAAAACTCTTGCTTC	47971348	False	NA	12	True	AATAAA	-2	NA	47971361	47981757	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_47971408_47973518_47973651_47973930_47974036_47974399_47974449_47975158_47975338_47975513_47975654_47975868_47976014_47976711_47976823_47977831_47977911_47978834_47978918_47980592_47980799_47981162_47981335_47981436
transcript_88349.nnic	chr17	-	973	2	NNC	ENSG00000263412.2	novel	566	2	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGGACTAGAATTTTGT	-48047909	True	NA	NA	False	AATAAA	-18	NA	48048091	48046880	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_48046971_48047208
transcript_88361.known	chr17	+	4390	6	FSM	ENSG00000082641.16	ENST00000585291.5	4390	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	76.6263662194678	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCACTTTTTCCCCACTTT	48039499	True	NA	-2	True	AATAAA	-25	NA	48048362	48061487	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48048463_48050606_48050820_48051116_48051629_48056385_48056599_48057343_48057503_48058294
transcript_88364.known	chr17	+	4839	6	FSM	ENSG00000082641.16	ENST00000362042.8	4839	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	67.1553423042426	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGGACTGGCCATTGCGT	48039495	True	NA	7	True	AATAAA	-19	NA	48048358	48061545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48048463_48050606_48051629_48056385_48056599_48057031_48057122_48057343_48057503_48058294
transcript_88379.known	chr17	+	4729	6	FSM	ENSG00000082641.16	ENST00000361665.7	4729	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	77.9420297400574	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTAAGTGCACTTTTTCC	48039909	False	NA	-9	True	AATAAA	-18	NA	48048772	48061480	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48048865_48050606_48051629_48056418_48056599_48057031_48057122_48057343_48057503_48058294
transcript_88382.known	chr17	+	4672	5	FSM	ENSG00000082641.16	ENST00000357480.9	4672	5	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	27.7342297531408	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTAAGTGCACTTTTTC	48039506	True	NA	-10	True	AATAAA	-17	NA	48048369	48061479	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48048463_48050606_48051629_48056385_48056599_48057343_48057503_48058294
transcript_88395.nic	chr17	+	4180	5	NIC	ENSG00000082641.16	novel	4729	6	NA	NA	-32	-523	intron_retention	FALSE	canonical	3	21	junction_1	78.3689192218446	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGGATTTTTCTCCTC	48039877	False	NA	36	True	CATAAA	-22	NA	48048740	48060956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_48048865_48050606_48051629_48056385_48056599_48057343_48057503_48058294
transcript_88396.nic	chr17	+	4703	5	NIC	ENSG00000082641.16	novel	4729	6	NA	NA	-32	0	intron_retention	FALSE	canonical	3	21	junction_1	78.3689192218446	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTAAGTGCACTTTTTC	48039877	False	NA	-10	True	AATAAA	-17	NA	48048740	48061479	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_48048865_48050606_48051629_48056385_48056599_48057343_48057503_48058294
transcript_88403.known	chr17	+	588	5	FSM	ENSG00000082641.16	ENST00000584634.5	588	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	85.6577492116154	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGCCCCTCCTGGAGAC	48054527	False	NA	NA	False	NA	NA	NA	48054549	48058331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48054639_48056385_48056599_48057031_48057122_48057343_48057503_48058294
transcript_88421.known	chr17	+	2172	4	FSM	ENSG00000082641.16	ENST00000536222.5	2172	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	86.4265905584361	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGGGTTTGAAGCCCACCA	48053184	True	NA	NA	False	NA	NA	NA	48054709	48059653	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48055151_48056385_48056599_48057343_48057503_48058294
transcript_88425.known	chr17	+	1998	4	FSM	ENSG00000082641.16	ENST00000582155.5	1998	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	88.7105154733956	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTGGCCAGACCATTTA	48053149	True	NA	NA	False	NA	NA	NA	48054674	48059833	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48054762_48056385_48056599_48057343_48057503_48058294
transcript_88429.known	chr17	+	2051	4	FSM	ENSG00000082641.16	ENST00000583378.5	2051	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	96.5021588704971	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGGCCGACAGAGGGGAA	48053166	True	NA	-66	True	NA	NA	NA	48054691	48059936	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48054762_48056418_48056599_48057343_48057503_48058294
transcript_88433.known	chr17	+	583	4	FSM	ENSG00000082641.16	ENST00000577431.1	583	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	99.2605997698315	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACATCAGCAAGTGAAATC	48054843	True	NA	NA	False	NA	NA	NA	48054919	48058307	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48055151_48056418_48056599_48057343_48057503_48058294
transcript_88443.known	chr17	-	2422	5	FSM	ENSG00000108468.15	ENST00000393408.7	2422	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	219.942606149877	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTCTTAAGTCTTACC	-48101181	False	NA	-1	True	AATAAA	-23	NA	48101198	48070051	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_48071580_48075005_48075101_48076000_48076179_48076864_48077042_48100754
transcript_88444.known	chr17	-	578	5	FSM	ENSG00000108468.15	ENST00000402583.5	578	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	243.003472197415	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGGCTGACGTGGCATT	-48101285	False	NA	NA	False	NA	NA	NA	48101302	48071498	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_48071580_48075005_48075101_48075988_48076179_48076864_48077042_48101267
transcript_88450.nic	chr17	-	611	3	ISM	ENSG00000108468.15	ENST00000495350.5	550	4	-242	1081	-51	-918	5prime_fragment	FALSE	canonical	3	503	junction_1	61.5	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGGTAAGAATAGAAGT	-48101512	False	NA	NA	False	AAGAAA	-1	NA	48101529	48076006	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_48076179_48076864_48077042_48101267
transcript_88451.nic	chr17	-	349	2	ISM	ENSG00000108468.15	ENST00000495350.5	550	4	-242	2029	-51	-1866	5prime_fragment	FALSE	canonical	3	626	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGAGGAATATGTGGTGG	-48101512	False	NA	NA	False	AAGAAA	-24	NA	48101529	48076954	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_48077042_48101267
transcript_88453.known	chr17	+	2992	7	FSM	ENSG00000002919.15	ENST00000359238.7	2992	7	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	24.3430345958209	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCACCTCAGTTAATCTA	48107177	True	NA	NA	False	NA	NA	NA	48107765	48123601	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48107839_48112030_48112086_48112573_48112661_48113300_48113402_48118703_48118800_48118973_48119187_48121234
transcript_88455.known	chr17	+	1282	7	FSM	ENSG00000002919.15	ENST00000582104.5	1282	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	30.8436919536772	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGGTTATGTTGTATCC	48107199	True	NA	NA	False	NA	NA	NA	48107787	48121887	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48107839_48112030_48112112_48112573_48112661_48113300_48113402_48118703_48118800_48118973_48119187_48121234
transcript_88456.known	chr17	-	2034	2	FSM	ENSG00000120094.9	ENST00000239174.7	2034	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGCCTGCTTCTGTTTC	-48530983	True	NA	NA	False	AATAAA	-18	NA	48531011	48528525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_48529876_48530327
transcript_88457.known	chr17	-	1682	2	FSM	ENSG00000173917.11	ENST00000330070.6	1682	2	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTGTTTGTGTTGGGACC	-48545091	False	NA	1	True	AATAAA	-20	NA	48545109	48542654	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_48543748_48544520
transcript_88460.known	chr17	-	382	2	FSM	ENSG00000159182.5	ENST00000290294.5	382	2	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_1	0	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGTGAAAGTTAACTGTG	-48719941	True	NA	-13	True	AATAAA	-20	NA	48722518	48721718	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_48721900_48722317
transcript_88461.known	chr17	+	560	2	FSM	ENSG00000229637.4	ENST00000422730.4	560	2	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTTTGTTTGCTCTGAA	48722684	True	NA	15	True	AATAAA	-15	NA	48723184	48724758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48723314_48724327
transcript_88462.known	chr17	+	504	2	FSM	ENSG00000229637.4	ENST00000432056.1	504	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCACATCTTTTGTTTG	48723621	False	NA	8	True	AATAAA	-8	NA	48723691	48724751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48723772_48724327
transcript_88464.known	chr17	-	3039	2	FSM	ENSG00000159184.8	ENST00000290295.8	3039	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGGAATCTTAGAGATT	-48728503	True	NA	NA	False	AATAAA	-17	NA	48728750	48724762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_48727044_48727992
transcript_88467.known	chr17	-	3573	16	FSM	ENSG00000170703.16	ENST00000393382.8	3573	16	0	0	0	0	multi-exon	FALSE	non_canonical	1	2	junction_3	3.83782345723313	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGAGGAGCCTGATTTGG	NA	False	NA	-1	True	AATAAA	-24	NA	48817229	48762233	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_48762974_48768988_48769255_48769727_48770098_48784922_48785202_48786163_48786336_48787810_48788000_48789930_48790107_48791377_48791604_48796060_48796147_48797060_48797205_48799603_48799761_48801254_48801386_48801524_48801644_48803890_48803929_48804771_48804992_48816969
transcript_88475.known	chr17	+	3635	13	FSM	ENSG00000136436.15	ENST00000258947.8	3635	13	0	0	0	0	multi-exon	TRUE	canonical	2	74	junction_1	19.394300422776	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTTTTTTTTGAGACAG	48829272	True	NA	NA	False	AGTAAA	-5	NA	48831034	48865245	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48831079_48841697_48841888_48848063_48848167_48848321_48848456_48849251_48849378_48851088_48851178_48851558_48851629_48852505_48852629_48852925_48853013_48856091_48856188_48860313_48860450_48862275_48862305_48862837
transcript_88485.known	chr17	+	3084	7	FSM	ENSG00000159202.18	ENST00000360943.10	3084	7	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_3	18.0623918681884	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGAAGTGCCTGTGGGTG	48902465	True	NA	8	True	AATAAA	-17	NA	48908406	48929056	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48908821_48910807_48910881_48912833_48913022_48916075_48916188_48921159_48921273_48922846_48922938_48926963
transcript_88491.nic	chr17	+	2946	6	NIC	ENSG00000159202.18	novel	3084	7	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_2	191.147482327129	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGGAAGTGCCTGTGGG	48902413	True	NA	6	True	AATAAA	-15	NA	48908354	48929054	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_48908821_48910807_48910881_48916075_48916188_48921159_48921273_48922846_48922938_48926963
transcript_88496.known	chr17	+	598	5	FSM	ENSG00000159199.14	ENST00000355938.9	598	5	0	0	0	0	multi-exon	FALSE	canonical	3	2767	junction_1	669.958720743301	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGTCTGTGCCTCTGTC	48880613	True	NA	38	True	ATTAAA	-18	NA	48892764	48895871	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48892841_48893408_48893457_48894371_48894450_48895155_48895335_48895654
transcript_88497.known	chr17	+	539	5	FSM	ENSG00000159199.14	ENST00000503641.5	539	5	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_3	1674.62374505439	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGTCTGTGCCTCTGTC	48880645	True	NA	38	True	ATTAAA	-18	NA	48892796	48895871	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48892841_48893408_48893457_48894371_48894450_48895182_48895335_48895654
transcript_88498.known	chr17	+	646	5	FSM	ENSG00000159199.14	ENST00000393366.7	646	5	0	0	0	0	multi-exon	FALSE	canonical	3	821	junction_1	1508.36523677125	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGTCTGTGCCTCTGTC	48880635	True	NA	38	True	ATTAAA	-18	NA	48892786	48895871	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48892911_48893408_48893457_48894371_48894450_48895155_48895335_48895654
transcript_88504.known	chr17	+	359	4	FSM	ENSG00000159199.14	ENST00000514808.5	359	4	0	0	0	0	multi-exon	FALSE	canonical	3	2767	junction_1	754.729237688737	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGCATCTCCCACTGTA	48880650	True	NA	NA	False	NA	NA	NA	48892801	48895349	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48892841_48893408_48893457_48894371_48894450_48895155
transcript_88505.known	chr17	+	468	4	FSM	ENSG00000159199.14	ENST00000506855.1	468	4	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_2	1674.41180385498	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGTCTGTGCCTCTGTC	48880665	True	NA	38	True	ATTAAA	-18	NA	48892816	48895871	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48892841_48893408_48893457_48895155_48895335_48895654
transcript_88512.known	chr17	+	2214	3	FSM	ENSG00000159199.14	ENST00000513347.1	2214	3	0	0	0	0	multi-exon	FALSE	canonical	3	2767	junction_1	701	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCCCTGTCTGTGCCTCT	48880615	True	NA	35	True	ATTAAA	-15	NA	48892766	48895868	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48892841_48893408_48895335_48895654
transcript_88517.known	chr17	+	759	4	FSM	ENSG00000159199.14	ENST00000513781.5	759	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	2033.34224041765	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCTAAACCCCTGTCTG	48880702	True	NA	28	True	ATTAAA	-8	NA	48892853	48895861	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48893126_48894348_48894450_48895155_48895335_48895654
transcript_88523.known	chr17	-	951	8	FSM	ENSG00000159210.10	ENST00000290330.7	951	8	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_2	518.534315869928	1014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTCTTTCTTCCCTCAT	-48934254	True	NA	29	True	AATAAA	-45	NA	48944810	48930373	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_48930613_48931642_48931715_48933204_48933347_48936169_48936243_48937019_48937125_48940923_48941063_48943924_48943976_48944680
transcript_88526.known	chr17	-	700	7	FSM	ENSG00000159210.10	ENST00000576353.5	700	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	604.348892059325	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGGAGGCCAGAGAAGCC	-48934269	True	NA	-101	True	NA	NA	NA	48944825	48930503	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_48930613_48931642_48931718_48933204_48933347_48936169_48936243_48937019_48937125_48943924_48943976_48944680
transcript_88535.known	chr17	-	863	5	FSM	ENSG00000159210.10	ENST00000512243.5	863	5	0	0	0	0	multi-exon	FALSE	canonical	3	1414	junction_2	106.675618113981	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATATATAGTCTTTTTTTT	-48934152	True	NA	NA	False	NA	NA	NA	48944708	48935702	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_48936243_48937019_48937125_48940923_48941063_48943924_48943976_48944680
transcript_88537.known	chr17	-	445	4	FSM	ENSG00000159210.10	ENST00000510195.1	445	4	0	0	0	0	multi-exon	FALSE	canonical	3	1414	junction_1	77.7988860245869	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGACTCTGGACTTCTCTG	-48934250	True	NA	NA	False	NA	NA	NA	48944806	48936995	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_48937125_48940923_48941063_48943924_48943976_48944680
transcript_88547.known	chr17	+	8796	15	FSM	ENSG00000159217.10	ENST00000290341.8	8796	15	0	0	0	0	multi-exon	FALSE	canonical	3	1007	junction_10	112.129230291277	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTCTGTGTCTCAGGGT	48989091	False	NA	23	True	AATAAA	-24	NA	48997384	49056145	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48997921_48999108_48999170_49025617_49025667_49026465_49026518_49031909_49031974_49038167_49038450_49039956_49040092_49041377_49041501_49042241_49042378_49043427_49043551_49043966_49044087_49044990_49045066_49045889_49046022_49046259_49046374_49049351
transcript_88563.known	chr17	+	768	6	FSM	ENSG00000159217.10	ENST00000515586.5	768	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	484.895700125295	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTCAAGAAAAAAACAAAACA	48997734	False	NA	NA	False	NA	NA	NA	48997762	49036933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_48997921_48999108_48999170_49025617_49025667_49026465_49026518_49031909_49031974_49036549
transcript_88565.known	chr17	+	1629	8	FSM	ENSG00000108798.9	ENST00000225941.6	1629	8	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	2.71052370871575	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGTGTGTGTGGTGTG	49210557	True	NA	5	True	NA	NA	NA	49210706	49223225	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_49210842_49216530_49216699_49217738_49217916_49219539_49219626_49219857_49219954_49220168_49220327_49222090_49222226_49222551
transcript_88569.known	chr17	+	1718	8	FSM	ENSG00000108798.9	ENST00000419580.6	1718	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.53409053624371	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGCCAGGAGGGATTGAAA	49210376	True	NA	NA	False	AATAAA	-36	NA	49210410	49223036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_49210842_49216530_49216681_49217738_49217916_49219539_49219626_49219857_49219954_49220168_49220327_49222090_49222226_49222551
transcript_88570.known	chr17	-	2071	3	FSM	ENSG00000173868.12	ENST00000310544.9	2071	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGACTGAGATCTCTCT	-49230737	True	NA	NA	False	TATAAA	-17	NA	49230787	49223365	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_49225005_49226646_49226759_49230467
transcript_88579.known	chr17	-	1908	8	FSM	ENSG00000167085.13	ENST00000614445.5	1908	8	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_7	1814.59125661164	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCAGACCTTCCGGCTCA	-49346757	True	NA	-23	True	AATAAA	-4	NA	49414884	49404071	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_49405205_49406758_49406855_49409041_49409159_49409330_49409474_49411677_49411840_49413176_49413292_49414241_49414334_49414834
transcript_88583.known	chr17	-	1885	7	FSM	ENSG00000167085.13	ENST00000617874.5	1885	7	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_6	1601.41926635927	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCAGACCTTCCGGCTCA	-49346731	True	NA	-23	True	AATAAA	-4	NA	49414858	49404071	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_49405205_49406758_49406855_49409041_49409159_49409330_49409474_49411677_49411840_49413176_49413292_49414739
transcript_88584.known	chr17	-	1834	7	FSM	ENSG00000167085.13	ENST00000300408.8	1834	7	0	0	0	0	multi-exon	FALSE	canonical	3	3539	junction_6	341.85803583749	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGGGTTGGTTTTTTGT	-49346755	True	NA	-3	True	AATAAA	-24	NA	49414882	49404051	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_49405205_49406758_49406855_49409041_49409159_49409330_49409474_49411677_49411840_49413176_49413292_49414834
transcript_88589.known	chr17	-	4017	6	FSM	ENSG00000167085.13	ENST00000508009.6	4017	6	0	0	0	0	multi-exon	FALSE	canonical	3	3539	junction_5	345.986704946881	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCAGACCTTCCGGCTCA	-49346771	True	NA	-23	True	AATAAA	-4	NA	49414898	49404071	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_49405205_49406758_49409159_49409330_49409474_49411677_49411840_49413176_49413292_49414834
transcript_88598.known	chr17	+	3408	6	FSM	ENSG00000064300.9	ENST00000172229.8	3408	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	7.73045923603508	180	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTACAAAGAGATTTTCTG	49494554	True	NA	7	True	ATTAAA	-18	NA	49495292	49515008	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_49495484_49502062_49502205_49506298_49506659_49510411_49510665_49511891_49512053_49512707
transcript_88602.known	chr17	+	5635	2	FSM	ENSG00000182575.8	ENST00000328741.6	5635	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTCTAAGATGGGT	49575858	True	NA	21	True	AATAAA	-18	NA	49575870	49583827	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_49576274_49578595
transcript_88606.known	chr17	-	2414	13	FSM	ENSG00000121067.19	ENST00000514121.6	2414	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_10	97.6152808506719	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCCACCCCTTTTTCTAA	-49675260	True	NA	NA	False	NA	NA	NA	49678099	49599546	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_49600523_49601864_49602008_49607249_49607373_49607873_49607930_49611279_49611458_49618980_49619109_49619233_49619386_49621945_49622068_49622732_49622877_49636758_49636810_49668026_49668079_49675894_49676017_49677932
transcript_88608.known	chr17	-	1860	12	FSM	ENSG00000121067.19	ENST00000509079.6	1860	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_10	92.5262526962836	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAACAGAAGGGAAAAGGAA	-49675271	True	NA	-10	True	AAAAAG	-30	NA	49678110	49599989	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_49600523_49601864_49602008_49607249_49607373_49607873_49607930_49611279_49611458_49618980_49619109_49619233_49619386_49621945_49622068_49622732_49622877_49636758_49636810_49668026_49668079_49677932
transcript_88618.known	chr17	-	2965	11	FSM	ENSG00000121067.19	ENST00000347630.6	2965	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_10	77.3113187056074	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGTTCTGTCATTGACT	-49678152	False	NA	-2	True	AATAAA	-18	NA	49678163	49598885	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_49600523_49601864_49602008_49607249_49607373_49607873_49607930_49611279_49611458_49618980_49619109_49619233_49619386_49621945_49622068_49622732_49622877_49636758_49636810_49677932
transcript_8862.known	chr1	+	1849	2	FSM	ENSG00000171357.6	ENST00000371980.4	1849	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGGGGATCTCACTTCC	46202573	True	NA	3	True	AATAGA	-15	NA	46203333	46221256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_46203625_46219698
transcript_88620.known	chr17	-	2985	11	FSM	ENSG00000121067.19	ENST00000393328.6	2985	11	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_9	82.8505280610812	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTCTGTCATTGACTTG	-49675271	True	NA	0	True	AATAAA	-20	NA	49678110	49598883	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_49600523_49601864_49602008_49607249_49607373_49607873_49607930_49611279_49611458_49618980_49619109_49619233_49619386_49621945_49622068_49622732_49622877_49675894_49676017_49677932
transcript_88625.nic	chr17	-	1708	11	NIC	ENSG00000121067.19	novel	1860	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_9	87.1071179640332	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGGACATTGAGTTTTAA	-49675186	True	NA	22	True	AAAAAG	-14	NA	49678025	49600005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_49600523_49601864_49602008_49607249_49607373_49607873_49607930_49611279_49611458_49618980_49619109_49619233_49619386_49621945_49622068_49622732_49622877_49668026_49668079_49677932
transcript_88627.known	chr17	-	2850	10	FSM	ENSG00000121067.19	ENST00000504102.6	2850	10	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_9	26.7517162250883	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTCTGTCATTGACTTG	-49675258	True	NA	0	True	AATAAA	-20	NA	49678097	49598883	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_49600523_49601864_49602008_49607249_49607373_49607873_49607930_49611279_49611458_49618980_49619109_49619233_49619386_49621945_49622068_49622732_49622877_49677932
transcript_88637.known	chr17	+	3588	16	FSM	ENSG00000136504.13	ENST00000675278.1	3588	16	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_12	279.047299853547	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAAGTCTGTTTCATCTG	49781593	True	NA	18	True	AATAAA	-12	NA	49788647	49829090	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_49788850_49791885_49792034_49796749_49796927_49798318_49798559_49805362_49805446_49809118_49809209_49811475_49811575_49815802_49815914_49817819_49818012_49821336_49821427_49821649_49821791_49823201_49823236_49825505_49825543_49825999_49826147_49826692_49826800_49827400
transcript_88638.known	chr17	+	9514	15	FSM	ENSG00000136504.13	ENST00000259021.9	9514	15	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_5	259.43526777072	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAGTATGTTTCTTGACT	49781626	True	NA	NA	False	AATAAA	-14	NA	49788680	49835026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_49788850_49791885_49792034_49796749_49796927_49798318_49798559_49805362_49805446_49809118_49809209_49811475_49811575_49815802_49815914_49817819_49818012_49821336_49821427_49821649_49821791_49823201_49823296_49825999_49826147_49826692_49826800_49827400
transcript_88641.known	chr17	+	3469	14	FSM	ENSG00000136504.13	ENST00000424009.6	3469	14	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	262.43910536288	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTTCATCTGGGGGCT	49781651	True	NA	24	True	AATAAA	-18	NA	49788705	49829096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_49788850_49791885_49792034_49796749_49796927_49798318_49798559_49805362_49805446_49811475_49811575_49815802_49815914_49817819_49818012_49821336_49821427_49821649_49821791_49823201_49823296_49825999_49826147_49826692_49826800_49827400
transcript_88648.nic	chr17	+	2706	9	NIC	ENSG00000136504.13	novel	912	8	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	295	junction_1	137.532723378838	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTTCATCTGGGGGCT	NA	False	NA	24	True	AATAAA	-18	NA	49814946	49829096	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_49815075_49815802_49815914_49817819_49818012_49821336_49821427_49821649_49821791_49823201_49823296_49825999_49826147_49826692_49826800_49827400
transcript_88651.known	chr17	-	1320	9	FSM	ENSG00000121073.15	ENST00000507773.6	1320	9	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_7	96.6187740555633	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATCAAGCAAAATCACA	-49708073	False	NA	-33	True	AATAAA	-2	NA	49708090	49701338	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_49701511_49702857_49703012_49703187_49703295_49704099_49704227_49705123_49705282_49705865_49705897_49706203_49706310_49706964_49707069_49707729
transcript_88653.known	chr17	-	1615	9	FSM	ENSG00000121073.15	ENST00000240333.12	1615	9	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_7	70.9977992616673	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTGTCTTTTTCTTAGG	-49707947	False	NA	-17	True	ATTAAA	-13	NA	49707964	49700942	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_49701511_49702857_49703012_49703187_49703295_49704099_49704227_49705123_49705282_49705865_49705897_49706203_49706335_49706964_49707069_49707729
transcript_8866.known	chr1	+	2577	19	FSM	ENSG00000085999.13	ENST00000671528.1	2577	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	96.7780966954817	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGCAGTGTGGTAAGCC	46242842	True	NA	29	True	AATAAA	-22	NA	46247699	46278480	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_46247747_46248317_46248409_46248511_46248599_46249999_46250120_46258685_46258747_46259963_46260100_46260541_46260612_46260726_46261016_46261260_46261386_46267458_46267610_46270658_46270786_46272465_46272541_46272671_46272803_46273354_46273466_46273623_46273748_46274137_46274217_46274537_46274718_46277816_46277981_46278071
transcript_88661.nic	chr17	-	1339	8	NIC	ENSG00000121073.15	novel	1320	9	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_6	148.768962090998	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATATTCTAAAAAATGCACT	-49708180	False	11	-15	True	AATAAA	-20	NA	49708197	49701320	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_49701511_49702857_49703012_49703187_49703295_49704099_49704227_49705123_49705282_49705865_49705897_49706964_49707069_49707729
transcript_88664.known	chr17	-	2329	8	FSM	ENSG00000121104.8	ENST00000240364.7	2329	8	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_7	20.4230761839721	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGAAGTTCTGTTAAATA	-49760892	True	NA	-7	True	AATAAA	-20	NA	49764131	49710331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_49711556_49716164_49716316_49717512_49717715_49719759_49719895_49720325_49720437_49722498_49722595_49732550_49732721_49763891
transcript_88665.known	chr17	-	1522	8	FSM	ENSG00000121104.8	ENST00000513602.5	1522	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	73.328725891129	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACCCAGAAGGTCTTG	-49788557	False	NA	NA	False	NA	NA	NA	49788592	49710994	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_49711556_49716164_49716316_49717512_49717715_49719759_49719895_49720325_49720437_49722498_49722595_49732550_49732721_49788496
transcript_8867.known	chr1	+	3114	19	FSM	ENSG00000085999.13	ENST00000655446.1	3114	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	127.968227634638	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTTTGAGGCCTGAGAGC	46242939	False	NA	16	True	AATAAA	-9	NA	46247796	46278467	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_46248409_46248511_46248599_46249999_46250120_46257741_46257818_46258685_46258747_46259963_46260100_46260541_46260612_46260726_46261016_46261260_46261386_46267458_46267610_46270658_46270786_46272465_46272541_46272671_46272803_46273354_46273466_46273623_46273748_46274137_46274217_46274537_46274718_46277816_46277981_46278071
transcript_88671.known	chr17	-	529	3	FSM	ENSG00000121073.15	ENST00000508607.1	529	3	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	124.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATAGAACCATAGAACTT	-49704557	True	NA	NA	False	AAAAAG	-27	NA	49707920	49706075	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_49706310_49706964_49707069_49707729
transcript_88673.known	chr17	+	2018	3	FSM	ENSG00000108813.11	ENST00000240306.5	2018	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCTGTGAGATGTGTT	49969155	True	NA	7	True	ATTAAA	-20	NA	49969189	49974959	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_49969752_49973072_49973270_49973700
transcript_88678.known	chr17	+	4889	26	FSM	ENSG00000005884.18	ENST00000320031.13	4889	26	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_5	12.0197171347748	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCTGCATCTGCTTCCA	50055326	True	NA	17	True	AATAAA	-17	NA	50056109	50090481	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50056646_50064076_50064205_50064527_50064608_50068055_50068306_50070843_50070931_50071310_50071519_50071985_50072183_50073915_50074005_50074143_50074281_50074447_50074535_50075458_50075527_50075598_50075736_50076325_50076476_50076583_50076682_50076973_50077122_50077378_50077448_50078045_50078126_50078206_50078285_50078823_50078927_50079075_50079259_50079434_50079558_50080261_50080376_50081309_50081409_50087743_50087870_50088224_50088367_50089109
transcript_88684.known	chr17	+	3364	11	FSM	ENSG00000005882.12	ENST00000503176.6	3364	11	0	0	0	0	multi-exon	TRUE	canonical	3	103	junction_4	26.5648263687155	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTTGAATGGGCCCTGAG	50093477	True	NA	NA	False	NA	NA	NA	50095350	50112152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50095554_50097422_50097565_50105370_50105443_50105884_50106070_50106793_50106884_50107075_50107154_50108155_50108233_50108318_50108418_50108611_50108720_50109286_50109401_50109956
transcript_88692.known	chr17	-	4763	10	FSM	ENSG00000167100.15	ENST00000330175.9	4763	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	2.53859103528797	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGCCTCCTGGATGGTCTG	-50130150	False	NA	NA	False	NA	NA	NA	50130160	50110039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_50113049_50113923_50114080_50114186_50114307_50115563_50115724_50115829_50115905_50116002_50116091_50117406_50117696_50118160_50118328_50124916_50124972_50129516
transcript_88693.nnic	chr17	-	2874	7	NNC	ENSG00000167100.15	novel	2874	9	NA	NA	56	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	3.19722101554181	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTCTGCTCCAGTTGT	-50117707	True	NA	2	True	AATAAA	-27	NA	50117743	50111308	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_50113049_50113923_50114080_50114186_50114307_50115563_50115724_50115829_50115905_50116002_50116091_50117208
transcript_88694.known	chr17	-	2705	7	FSM	ENSG00000167100.15	ENST00000508892.5	2705	7	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_5	1.21335164821342	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTTATGATGTGCCAGTG	-50117763	True	NA	-25	True	NA	NA	NA	50117799	50111335	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_50113049_50113923_50114080_50114186_50114307_50115563_50115724_50115829_50115905_50116002_50116091_50117406
transcript_88696.known	chr17	+	865	4	FSM	ENSG00000005882.12	ENST00000505897.5	865	4	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	11.2644968324772	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTGTTGTTTAGAGTTT	50093513	True	NA	NA	False	TATAAA	-22	NA	50095386	50106368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50095554_50097422_50097565_50105370_50105443_50105884
transcript_88698.known	chr17	+	553	2	FSM	ENSG00000005882.12	ENST00000508960.1	553	2	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCTGGAAACACAGGATC	50093501	True	NA	NA	False	NA	NA	NA	50095374	50097796	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50095554_50097422
transcript_88701.known	chr17	-	4212	10	FSM	ENSG00000108819.11	ENST00000612501.2	4212	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	5.14241620684717	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGCTGCCTGGTTTCTT	-50150643	False	NA	-7	True	CATAAA	-14	NA	50150677	50133736	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_50135385_50135552_50135650_50135967_50136198_50139262_50139317_50139428_50139582_50140092_50140229_50141268_50141374_50143597_50143719_50145112_50145246_50149142
transcript_88702.known	chr17	-	5914	51	FSM	ENSG00000108821.14	ENST00000225964.10	5914	51	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_46	28.4588193711545	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAATCCGCAGTGGCCTCC	-50197281	True	NA	-10	True	AATAAA	-21	NA	50201631	50184100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_50185649_50185777_50186021_50186316_50186508_50186639_50186923_50187014_50187123_50187483_50187538_50187875_50187984_50188095_50188150_50188529_50188638_50188741_50188796_50188902_50189011_50189167_50189276_50189376_50189539_50189678_50189733_50189858_50189913_50190000_50190109_50190326_50190381_50190542_50190597_50190816_50190925_50191382_50191491_50191787_50191887_50191979_50192025_50192474_50192529_50192639_50192694_50192796_50192851_50192993_50193048_50193942_50194042_50194129_50194184_50194348_50194448_50194572_50194627_50194720_50194829_50195046_50195101_50195231_50195331_50195433_50195479_50195566_50195666_50195922_50195977_50196154_50196200_50196313_50196368_50196483_50196529_50196616_50196671_50197009_50197064_50197179_50197234_50197731_50197786_50197948_50198003_50198160_50198206_50198432_50198505_50199225_50199328_50199417_50199454_50199555_50199591_50199752_50199948_50201410
transcript_88713.known	chr17	+	2693	5	FSM	ENSG00000167105.8	ENST00000507382.2	2693	5	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_4	13.2098448136229	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGCAAAGCATCCATCAC	50273150	True	NA	NA	False	AATAAA	-19	NA	50274465	50281485	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50274571_50277714_50277741_50278555_50278631_50278800_50278997_50279194
transcript_88720.known	chr17	+	3507	11	FSM	ENSG00000015532.10	ENST00000017003.7	3507	11	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	8.86622805932715	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCCATCACCATTCATTG	50341509	True	NA	42	True	NA	NA	NA	50346125	50361185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50346276_50353629_50354123_50354407_50354584_50354853_50355057_50355500_50355582_50355780_50355998_50356084_50356262_50356510_50356774_50357056_50357253_50358206_50358541_50359968
transcript_88730.known	chr17	+	2107	10	FSM	ENSG00000015532.10	ENST00000507602.5	2107	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	30.1072158202057	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGCCGCATCCCTGTCCT	50341518	True	NA	NA	False	ATTAAA	-30	NA	50346134	50363138	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50346276_50353629_50354123_50354407_50354584_50354853_50355057_50355500_50355582_50355780_50355998_50356084_50356262_50356510_50356774_50357056_50357253_50362978
transcript_88732.known	chr17	+	3267	10	FSM	ENSG00000015532.10	ENST00000376550.7	3267	10	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_8	29.0661229986532	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGGCTCTGTGTTTTTC	50341519	True	NA	8	True	AATATA	-15	NA	50346135	50361151	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50346276_50353629_50354123_50354407_50354584_50354853_50355057_50355500_50355582_50355780_50355998_50356084_50356262_50356510_50356774_50358206_50358541_50359968
transcript_88747.known	chr17	+	2174	1	FSM	ENSG00000015532.10	ENST00000571021.1	2174	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGGCTCTGTGTTTTTC	50358967	False	NA	8	True	AATATA	-15	NA	50358977	50361151	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50359000_50361200
transcript_88750.known	chr17	-	742	5	FSM	ENSG00000108826.16	ENST00000503633.5	742	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	682.086688038991	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTGGATGGAACTGCCT	-50362539	True	NA	-14	True	AATAAA	-37	NA	50373196	50367867	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_50368314_50368837_50368868_50370031_50370100_50370454_50370587_50373130
transcript_88753.known	chr17	-	869	4	FSM	ENSG00000108826.16	ENST00000511860.1	869	4	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_3	653.314795655373	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGCATGCTATTTAGGGAC	-50360506	False	NA	-34	True	AATAAA	-17	NA	50371163	50367887	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_50368299_50370031_50370100_50370454_50370587_50370905
transcript_88755.known	chr17	-	686	4	FSM	ENSG00000108826.16	ENST00000225969.9	686	4	0	0	0	0	multi-exon	FALSE	canonical	3	1323	junction_3	91.3613095839201	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGGATGGAACTGCCTG	-50362527	True	NA	-13	True	AATAAA	-38	NA	50373184	50367866	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_50368299_50370031_50370100_50370454_50370587_50373130
transcript_88756.known	chr17	-	2441	3	FSM	ENSG00000108826.16	ENST00000442592.3	2441	3	0	0	0	0	multi-exon	FALSE	canonical	3	1323	junction_2	40	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTGGATGGAACTGCCT	-50362550	True	NA	-14	True	AATAAA	-37	NA	50373207	50367867	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_50370100_50370454_50370587_50373130
transcript_88759.known	chr17	+	2354	9	FSM	ENSG00000154920.15	ENST00000393271.6	2354	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	43.3241777186827	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGAGCTTGGAGGAAGAC	50371279	True	NA	18	True	AATAAA	-18	NA	50373219	50381459	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50373278_50375184_50375984_50376065_50376194_50378594_50378682_50378773_50378896_50379067_50379225_50379451_50379568_50380311_50380502_50380762
transcript_88760.known	chr17	+	2330	9	FSM	ENSG00000154920.15	ENST00000338165.9	2330	9	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_5	19.4983973700404	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGTGTAGTGATTCTGA	50371288	True	NA	42	True	AATAAA	-42	NA	50373228	50381483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50373278_50375184_50375984_50376065_50376194_50378594_50378682_50378773_50378896_50379106_50379225_50379451_50379568_50380311_50380502_50380762
transcript_88777.known	chr17	-	2880	7	FSM	ENSG00000108829.10	ENST00000225972.8	2880	7	0	0	0	0	multi-exon	FALSE	canonical	3	882	junction_1	56.4852488118211	1168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTTTGTTCCTTTGTGT	-50380134	True	NA	-6	True	ATTAAA	-17	NA	50397523	50381237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_50383236_50385117_50385292_50388059_50388133_50392397_50392503_50392738_50392898_50394928_50394989_50397212
transcript_88790.known	chr17	+	2177	16	FSM	ENSG00000167107.13	ENST00000300441.9	2177	16	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_10	9.78979060041634	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGCTGGTGGGCTCTCT	50425969	True	NA	9	True	CATAAA	-21	NA	50426217	50474837	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50426390_50460676_50460873_50461241_50461371_50461632_50461687_50462183_50462303_50462419_50462586_50463155_50463252_50463394_50463553_50463817_50463910_50464217_50464295_50471027_50471136_50472427_50472580_50473664_50473807_50473893_50474005_50474198_50474268_50474501
transcript_88796.nnic	chr17	+	2284	10	NNC	ENSG00000136444.10	novel	2467	9	NA	NA	-101	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_9	36.6275886035865	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGACTGTGGTCCTCTCC	NA	False	NA	12	True	AATAAA	-16	NA	50478758	50485974	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_50479020_50479628_50479763_50479879_50480085_50482090_50482457_50482642_50482707_50483339_50483488_50483705_50483761_50484441_50484546_50484743_50484895_50485178
transcript_88800.known	chr17	+	2467	9	FSM	ENSG00000136444.10	ENST00000258955.7	2467	9	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_6	13.0743068649929	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGACTGTGGTCCTCTCC	50477661	True	NA	12	True	AATAAA	-16	NA	50478859	50485974	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50479020_50479628_50479763_50479879_50480085_50482090_50482457_50482642_50482707_50483339_50483488_50483705_50483761_50484441_50484546_50484743
transcript_88813.known	chr17	+	1064	8	FSM	ENSG00000136444.10	ENST00000504284.1	1064	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	48.8538010553019	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGCAGCAGAGAACCCC	50477704	False	NA	NA	False	NA	NA	NA	50478902	50484819	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50479020_50479628_50479763_50482090_50482457_50482642_50482707_50483339_50483488_50483705_50483761_50484441_50484546_50484743
transcript_88817.nic	chr17	+	2984	7	NIC	ENSG00000136444.10	novel	2467	9	NA	NA	-101	0	intron_retention	FALSE	canonical	3	133	junction_4	5.99073358520381	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGACTGTGGTCCTCTCC	NA	False	NA	12	True	AATAAA	-16	NA	50478758	50485974	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_50479020_50479628_50479763_50479879_50480085_50482090_50482457_50482642_50482707_50483339_50483761_50484441
transcript_88827.known	chr17	+	2634	17	FSM	ENSG00000006282.21	ENST00000006658.11	2634	17	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	19.0246550560056	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGGGCCTCAGCTTTGC	50545236	True	NA	16	True	AATAAA	-22	NA	50547173	50555852	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50547286_50547719_50547768_50548282_50548454_50548553_50548619_50548809_50548965_50549042_50549187_50549285_50549488_50549984_50550116_50550207_50550313_50550535_50550611_50550707_50550918_50550997_50551191_50551510_50551680_50551968_50552181_50554250_50554451_50555231_50555313_50555491
transcript_88829.known	chr17	+	2734	17	FSM	ENSG00000006282.21	ENST00000503127.5	2734	17	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	19.0246550560056	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGAGGGCCTCAGCTTT	50545189	True	NA	14	True	AATAAA	-20	NA	50547126	50555850	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50547286_50547664_50547768_50548282_50548454_50548553_50548619_50548809_50548965_50549042_50549187_50549285_50549488_50549984_50550116_50550207_50550313_50550535_50550611_50550707_50550918_50550997_50551191_50551510_50551680_50551968_50552181_50554250_50554451_50555231_50555313_50555491
transcript_88836.known	chr17	+	3539	18	FSM	ENSG00000006282.21	ENST00000504334.5	3539	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	34.9365217735426	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGAGGGCCTCAGCTTT	50543034	False	NA	14	True	AATAAA	-20	NA	50543057	50555850	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50543536_50546305_50546482_50547067_50547286_50547664_50547768_50548282_50548454_50548553_50548619_50548809_50548965_50549042_50549187_50549285_50549488_50549984_50550313_50550535_50550611_50550707_50550918_50550997_50551191_50551510_50551680_50551968_50552181_50554250_50554451_50555231_50555313_50555491
transcript_88838.known	chr17	+	2634	16	FSM	ENSG00000006282.21	ENST00000356488.8	2634	16	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	27.2929783399809	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGGGCCTCAGCTTTGC	50545188	True	NA	16	True	AATAAA	-22	NA	50547125	50555852	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50547286_50548282_50548454_50548553_50548619_50548809_50548965_50549042_50549187_50549285_50549488_50549984_50550116_50550207_50550313_50550535_50550611_50550707_50550918_50550997_50551191_50551510_50551680_50551968_50552181_50554250_50554451_50555231_50555313_50555491
transcript_8885.known	chr1	+	3078	18	FSM	ENSG00000085999.13	ENST00000371975.9	3078	18	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_7	39.6693949998482	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCCTGAGAGCAGTGTG	46242905	True	NA	22	True	AATAAA	-15	NA	46247762	46278473	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_46248409_46248511_46248599_46249999_46250120_46258685_46258747_46259963_46260100_46260541_46260612_46260726_46261016_46261260_46261386_46267458_46267610_46270658_46270786_46272465_46272541_46272671_46272803_46273354_46273466_46273623_46273748_46274137_46274217_46274537_46274718_46277816_46277981_46278071
transcript_88868.known	chr17	+	2092	10	FSM	ENSG00000136449.15	ENST00000470609.5	2092	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	2.65739127624476	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGGTGACAAGAGCGAAAC	50508124	True	NA	NA	False	NA	NA	NA	50508424	50522666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50508751_50516569_50516698_50517292_50517453_50517594_50517699_50518540_50518725_50518973_50519090_50519639_50519788_50521109_50521226_50521315_50521432_50521972
transcript_88870.known	chr17	+	2449	10	FSM	ENSG00000049283.19	ENST00000512379.5	2449	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	10.7393357957247	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTACAGCTCTTCTCAACC	50532067	True	NA	NA	False	NA	NA	NA	50532737	50542486	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50532986_50536420_50536626_50536707_50537119_50538078_50538198_50539186_50539316_50540246_50540335_50540792_50541063_50541228_50541334_50541463_50541695_50541843
transcript_88876.nic	chr17	+	2966	9	NIC	ENSG00000049283.19	novel	3879	10	NA	NA	-501	0	intron_retention	FALSE	canonical	3	27	junction_4	6.0917464655056	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGCTCTCACCAAGTGGA	NA	False	NA	6	True	AATAAA	-17	NA	50532180	50542364	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_50532986_50536420_50537119_50538078_50538198_50539186_50539316_50540246_50540335_50540792_50541063_50541228_50541334_50541463_50541695_50541843
transcript_88877.nic	chr17	+	2849	9	NIC	ENSG00000049283.19	novel	2449	10	NA	NA	0	318	intron_retention	FALSE	canonical	3	27	junction_4	6.0917464655056	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCGTATGAAGAATTTCAAAA	50532067	True	NA	20	True	AATAAA	-25	NA	50532737	50542804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_50532986_50536420_50537119_50538078_50538198_50539186_50539316_50540246_50540335_50540792_50541063_50541228_50541334_50541463_50541695_50541843
transcript_88878.nic	chr17	+	2497	9	NIC	ENSG00000049283.19	novel	3879	10	NA	NA	-173	0	intron_retention	FALSE	canonical	1	2	junction_1	11.9582607431014	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGCTCTCACCAAGTGGA	NA	False	NA	6	True	AATAAA	-17	NA	50532508	50542364	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_50532845_50536420_50537119_50538078_50538198_50539186_50539316_50540246_50540335_50540792_50541063_50541228_50541334_50541463_50541695_50541843
transcript_88890.nic	chr17	+	2469	7	ISM	ENSG00000006283.18	ENST00000416767.8	4899	23	-740	32798	-23	0	5prime_fragment	FALSE	canonical	0	0	junction_1	3.67045259092421	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGATCAGTGATCAATTG	50560420	True	NA	16	True	AATAAA	-19	NA	50560691	50573674	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_50561702_50568869_50568982_50569164_50569299_50569705_50569804_50571877_50572038_50572553_50572855_50573020
transcript_88892.known	chr17	-	1433	2	FSM	ENSG00000250107.1	ENST00000505793.1	1433	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCCCCTTTCCAGCT	NA	False	NA	NA	False	TATAAA	-16	NA	50562108	50556206	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_50557459_50561927
transcript_88893.known	chr17	-	4166	5	FSM	ENSG00000154945.7	ENST00000285243.7	4166	5	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_2	26.7523363465698	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATCCTATATGCCTTCATT	-50707569	False	NA	-9	True	ATTAAA	-18	NA	50707914	50693197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_50696144_50696939_50697122_50699398_50699894_50700567_50700717_50707520
transcript_88899.known	chr17	+	2284	11	FSM	ENSG00000108848.16	ENST00000393227.6	2284	11	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_10	148.95301272549	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGCCTTGTTACACTCAAT	50704626	True	NA	NA	False	AATAAA	-13	NA	50719598	50751617	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719_50746004_50746541_50746703_50750500_50750642_50750746
transcript_88900.known	chr17	+	1972	11	FSM	ENSG00000108848.16	ENST00000240304.5	1972	11	0	0	0	0	multi-exon	FALSE	canonical	3	547	junction_10	72.1338339477391	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAGTCCCCTGTTTTAAA	50704630	True	NA	11	True	AATAAA	-14	NA	50719602	50752709	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719_50746004_50746541_50746703_50750500_50750695_50752199
transcript_88905.known	chr17	+	6987	10	FSM	ENSG00000108848.16	ENST00000505658.6	6987	10	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_2	59.9526562185056	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGGTGTAGGTAGTTAC	50704630	True	NA	32	True	AATAAA	-26	NA	50719602	50756219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719_50746004_50746541_50746703_50750500
transcript_88906.nic	chr17	+	1113	9	NIC	ENSG00000108848.16	novel	1112	9	NA	NA	-6	959	combination_of_known_junctions	FALSE	canonical	3	61	junction_3	267.536416913661	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAGAAGCAAGAAAGAGAAG	NA	False	NA	NA	False	NA	NA	NA	50719558	50745772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_50719832_50736959_50737027_50737286_50737480_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719
transcript_88912.nic	chr17	+	920	8	ISM	ENSG00000108848.16	ENST00000393227.6	2284	11	-40	5845	-6	959	5prime_fragment	FALSE	canonical	3	628	junction_2	34.7803603976117	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAGAAGCAAGAAAGAGAAG	NA	False	NA	NA	False	NA	NA	NA	50719558	50745772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719
transcript_88913.nic	chr17	+	994	8	ISM	ENSG00000108848.16	ENST00000393227.6	2284	11	-40	5771	-6	1033	5prime_fragment	FALSE	canonical	3	628	junction_2	34.7803603976117	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGGAAGAGGAAGAAAGAGAA	NA	False	NA	NA	False	AAAAAG	-43	NA	50719558	50745846	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719
transcript_88914.nic	chr17	+	862	7	ISM	ENSG00000108848.16	ENST00000393227.6	2284	11	-40	6809	-6	0	5prime_fragment	FALSE	canonical	3	628	junction_2	35.391461619373	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTAAGTTTTTTTGTT	NA	False	NA	17	True	ATTAAA	-17	NA	50719558	50744808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651
transcript_88917.known	chr17	+	582	5	FSM	ENSG00000108848.16	ENST00000509335.5	582	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	310.99869372716	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCGATACTTACAGAGCT	50704625	True	NA	NA	False	NA	NA	NA	50719597	50741149	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50719832_50736959_50737027_50737286_50737480_50740305_50740346_50741101
transcript_88920.known	chr17	+	533	4	FSM	ENSG00000108848.16	ENST00000508218.5	533	4	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_2	31.084115271666	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTCAGAGACCTCCCTAA	50704624	True	NA	NA	False	NA	NA	NA	50719596	50741292	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101
transcript_88921.known	chr17	+	582	4	FSM	ENSG00000108848.16	ENST00000506686.5	582	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	316.661754347864	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTACTGACCCTTGGGGA	50704625	True	NA	NA	False	NA	NA	NA	50719597	50738196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50719832_50736959_50737027_50737286_50737480_50738108
transcript_88922.known	chr17	+	1351	2	FSM	ENSG00000229980.5	ENST00000416263.3	1351	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTATTTGTTTGTTTT	NA	False	NA	21	True	TATAAA	-18	NA	50866678	50868307	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_50867218_50867495
transcript_88924.known	chr17	-	2238	2	FSM	ENSG00000141232.5	ENST00000499247.3	2238	2	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTATTGTCTTTGTTTTT	-50862642	True	NA	-11	True	ATTAAA	-19	NA	50866354	50862222	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_50864164_50866057
transcript_88925.known	chr17	-	8276	30	FSM	ENSG00000008294.22	ENST00000262013.12	8276	30	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_24	29.5925561871303	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTCTAGTGTGTTTTGT	-51115531	True	NA	-2	True	TATAAA	-19	NA	51120868	50962173	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_50966388_50970706_50970857_50974770_50974948_50977107_50977222_50979745_50979918_50982523_50982673_50984922_50984991_50985697_50985779_50987111_50987238_50989676_50989873_50990449_50990669_50993763_50993936_50995056_50995225_50995443_50995534_50996564_50996695_50998443_50998618_50999660_50999718_51001714_51001846_51005211_51005264_51006084_51006238_51007268_51007327_51014231_51014354_51020158_51020259_51021157_51021366_51031680_51031723_51041500_51041652_51047374_51047470_51056411_51056483_51079583_51079705_51120353
transcript_88927.known	chr17	-	4761	29	FSM	ENSG00000008294.22	ENST00000357122.8	4761	29	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_24	18.3997559877343	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTTTCCTGTTTCTGACTT	-51115528	True	NA	-38	True	ATTAAA	-28	NA	51120865	50965643	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_50966388_50970706_50970857_50974770_50974948_50977107_50977222_50979745_50979918_50982523_50982673_50984922_50984991_50985697_50985779_50987111_50987238_50989676_50989873_50990449_50990669_50993763_50993936_50995056_50995225_50995443_50995534_50996564_50996695_50998443_50998618_50999660_50999718_51001714_51001846_51005211_51005264_51006084_51006238_51007268_51007327_51014231_51014354_51020158_51020259_51021157_51021366_51041500_51041652_51047374_51047470_51056411_51056483_51079583_51079705_51120353
transcript_88928.nic	chr17	-	1851	13	ISM	ENSG00000008294.22	ENST00000357122.8	4761	29	-39	34036	-36	-1267	5prime_fragment	FALSE	canonical	3	93	junction_8	15.5373653565275	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCAAGCATTTGGCAGTTG	-51115567	True	NA	NA	False	NA	NA	NA	51120904	50999679	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_50999718_51001714_51001846_51005211_51005264_51006084_51006238_51007268_51007327_51014231_51014354_51020158_51020259_51021157_51021366_51041500_51041652_51047374_51047470_51056411_51056483_51079583_51079705_51120353
transcript_88931.nic	chr17	-	672	2	ISM	ENSG00000008294.22	ENST00000357122.8	4761	29	-39	113940	-36	-48141	5prime_fragment	FALSE	canonical	3	115	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAAAACATTTCTTCT	-51115567	True	NA	96	True	NA	NA	NA	51120904	51079583	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_51079705_51120353
transcript_88932.nic	chr17	-	592	2	ISM	ENSG00000008294.22	ENST00000357122.8	4761	29	-39	114020	-36	-48221	5prime_fragment	FALSE	canonical	3	115	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTTACAGACCCGAGTGG	-51115567	True	NA	16	True	NA	NA	NA	51120904	51079663	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_51079705_51120353
transcript_88933.known	chr17	+	1021	8	FSM	ENSG00000011052.21	ENST00000393193.6	1021	8	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_4	2640.41310929845	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	51104121	True	NA	25	True	AATAAA	-17	NA	51153589	51171744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_51153663_51155650_51155781_51159979_51160082_51161159_51161273_51166826_51166957_51168241_51168344_51169936_51170050_51171486
transcript_88935.known	chr17	+	986	6	FSM	ENSG00000239672.8	ENST00000336097.7	986	6	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	1740.53548082192	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTGCATTGCTTTTTT	51104107	True	NA	53	True	ATTAAA	-43	NA	51153575	51162061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_51153663_51154224_51154445_51155650_51155781_51159979_51160082_51161159_51161273_51161727
transcript_88937.known	chr17	+	781	5	FSM	ENSG00000239672.8	ENST00000475573.5	781	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	1474.55575937297	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGATTCATTGAGTTGGTT	51104128	True	NA	27	True	ATTAAA	-17	NA	51153596	51162035	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_51153663_51155650_51155781_51159979_51160082_51161097_51161273_51161727
transcript_88938.known	chr17	+	890	5	FSM	ENSG00000239672.8	ENST00000393196.8	890	5	0	0	0	0	multi-exon	FALSE	canonical	3	3088	junction_1	409.403834862352	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGCATTCTTTGCCTGC	51104090	True	NA	NA	False	TATAAA	-29	NA	51153558	51162168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_51153663_51155650_51155781_51159979_51160082_51161159_51161273_51161727
transcript_88940.known	chr17	+	850	5	FSM	ENSG00000243678.12	ENST00000514264.6	850	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	3226.25745834086	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	51164784	False	NA	25	True	AATAAA	-17	NA	51165434	51171744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_51165682_51166826_51166957_51168241_51168344_51169936_51170050_51171486
transcript_88941.known	chr17	+	692	5	FSM	ENSG00000243678.12	ENST00000513177.5	692	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	3214.20669644937	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGTCTCCTTGTGCTTA	51165758	False	NA	24	True	AATAAA	-16	NA	51165814	51171743	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_51165905_51166826_51166957_51168241_51168344_51169936_51170050_51171486
transcript_88944.known	chr17	+	690	5	FSM	ENSG00000243678.12	ENST00000512737.6	690	5	0	0	0	0	multi-exon	FALSE	canonical	3	5160	junction_1	1058.96659531828	2501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	51081498	True	NA	25	True	AATAAA	-17	NA	51166410	51171744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_51166498_51166826_51166957_51168241_51168344_51169936_51170050_51171486
transcript_88946.known	chr17	+	749	5	FSM	ENSG00000243678.12	ENST00000503064.5	749	5	0	0	0	0	multi-exon	TRUE	canonical	3	365	junction_1	3094.591037197	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	51081505	True	NA	25	True	AATAAA	-17	NA	51166417	51171744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_51166564_51166826_51166957_51168241_51168344_51169936_51170050_51171486
transcript_88954.known	chr17	+	568	4	FSM	ENSG00000243678.12	ENST00000393183.7	568	4	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_3	2920.09604103853	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	51081507	True	NA	25	True	AATAAA	-17	NA	51166419	51171744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_51166498_51166826_51166957_51168241_51168344_51171486
transcript_88960.known	chr17	+	866	4	FSM	ENSG00000243678.12	ENST00000393190.4	866	4	0	0	0	0	multi-exon	FALSE	canonical	3	7133	junction_3	409.074022098147	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	51081651	False	NA	25	True	AATAAA	-17	NA	51166563	51171744	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_51166957_51168241_51168344_51169936_51170050_51171486
transcript_88969.nnic	chr17	-	2029	16	NNC	ENSG00000011258.16	novel	5365	17	NA	NA	5	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	14.2392259465027	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTAAGTCCCAGCAATACA	-51253350	True	NA	NA	False	AAGAAA	-3	NA	51260044	51192237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_51192281_51192781_51193017_51193427_51193511_51195213_51195362_51201591_51201697_51202021_51202078_51202700_51202936_51203139_51203229_51203790_51203926_51206887_51207006_51217333_51217417_51218929_51219045_51220329_51220464_51225007_51225184_51259142_51259207_51259834
transcript_88972.nic	chr17	-	2139	16	ISM	ENSG00000011258.16	ENST00000586178.6	5365	17	-79	14813	35	15	5prime_fragment	FALSE	canonical	3	21	junction_12	11.0626498734355	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTAAGTCCCAGCAATACA	-51253434	True	NA	NA	False	AAGAAA	-3	NA	51260128	51192237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_51192281_51192781_51193017_51193427_51193511_51195213_51195362_51201591_51201697_51202021_51202078_51202700_51202936_51203139_51203229_51203790_51203926_51206887_51207006_51217333_51217417_51218929_51219045_51220329_51220464_51225007_51225210_51259142_51259207_51259834
transcript_88973.nnic	chr17	-	2704	16	NIC	ENSG00000011258.16	novel	5365	17	NA	NA	-815	15	combination_of_known_splicesites	FALSE	canonical	2	2	junction_15	14.1509324388497	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTAAGTCCCAGCAATACA	-51260458	True	NA	NA	False	AAGAAA	-3	NA	51260978	51192237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_51192281_51192781_51193017_51193427_51193511_51195213_51195362_51201591_51201697_51202021_51202078_51202700_51202936_51203139_51203229_51203790_51203926_51206887_51207006_51217333_51217417_51218929_51219045_51220329_51220464_51225007_51225210_51259142_51259207_51260119
transcript_88978.nnic	chr17	-	2026	15	NIC	ENSG00000011258.16	novel	5365	17	NA	NA	-30	15	combination_of_known_splicesites	FALSE	canonical	3	12	junction_14	12.2626444529552	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTAAGTCCCAGCAATACA	-51253385	True	NA	NA	False	AAGAAA	-3	NA	51260079	51192237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_51192281_51192781_51193017_51193427_51193511_51195213_51195362_51201591_51201697_51202021_51202078_51202700_51202936_51203139_51203229_51203790_51203926_51206887_51207006_51217333_51217417_51218929_51219045_51220329_51220464_51225007_51225210_51259834
transcript_88979.nic	chr17	-	2776	15	NIC	ENSG00000011258.16	novel	5365	17	NA	NA	-951	15	combination_of_known_junctions	FALSE	canonical	3	6	junction_14	13.2743807265525	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTAAGTCCCAGCAATACA	-51261018	False	NA	NA	False	AAGAAA	-3	NA	51261114	51192237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_51192281_51192781_51193017_51193427_51193511_51195213_51195362_51201591_51201697_51202021_51202078_51202700_51202936_51203139_51203229_51203790_51203926_51206887_51207006_51217333_51217417_51218929_51219045_51220329_51220464_51225007_51225210_51260119
transcript_88989.known	chr17	+	1876	14	FSM	ENSG00000011260.14	ENST00000225298.12	1876	14	0	0	0	0	multi-exon	FALSE	canonical	3	660	junction_4	60.1043471337864	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGTATCTGGTTCTTCC	51251578	True	NA	NA	False	AATAAA	-25	NA	51260545	51297933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_51260927_51263273_51263387_51266181_51266281_51268836_51268905_51273361_51273451_51275865_51275992_51277129_51277305_51280004_51280106_51280388_51280480_51285244_51285369_51288028_51288204_51293902_51294046_51296964_51297004_51297781
transcript_89002.nic	chr17	+	492	2	ISM	ENSG00000011260.14	ENST00000225298.12	1876	14	-18	34567	-18	-24711	5prime_fragment	FALSE	canonical	3	721	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGATGAAGATGAGGAAAT	51251560	True	NA	55	True	NA	NA	NA	51260527	51263366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_51260927_51263273
transcript_89007.known	chr17	+	1895	15	FSM	ENSG00000141198.16	ENST00000348161.8	1895	15	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	120.065883274686	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGAATTATAAATTGTTA	54896609	True	NA	NA	False	ACTAAA	-44	NA	54900805	54961722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_54900924_54905488_54905568_54912665_54912816_54913747_54913874_54914638_54914744_54915745_54915863_54930072_54930207_54936648_54936710_54937108_54937227_54938923_54939021_54947260_54947313_54949517_54949624_54950044_54950127_54960565_54960628_54961234
transcript_89018.known	chr17	-	1054	5	FSM	ENSG00000166260.13	ENST00000572558.5	1054	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	158.854493169063	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAAACCTGTGTCCTTGT	-54958258	True	NA	-14	True	AATAAA	-11	NA	54968654	54951908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_54952113_54961118_54961313_54963305_54963432_54964696_54964853_54968280
transcript_89024.known	chr17	-	3150	4	FSM	ENSG00000166260.13	ENST00000299335.8	3150	4	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_1	27.7168220079832	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTATTCTAGTTTATTT	-54958258	True	NA	NA	False	AGTAAA	-20	NA	54968654	54960421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_54962916_54963305_54963432_54964696_54964853_54968280
transcript_89027.known	chr17	-	1108	3	FSM	ENSG00000166260.13	ENST00000571584.1	1108	3	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_2	12	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACAAAGGCTTAATCCC	-54958307	True	NA	15	True	ATTAAA	-33	NA	54968703	54962902	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_54963432_54964696_54964853_54968280
transcript_89031.known	chr17	+	2228	16	FSM	ENSG00000141198.16	ENST00000445275.6	2228	16	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_12	119.020707815442	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAATTTAATACTTTTT	54896555	True	NA	NA	False	AATAAA	-9	NA	54900751	54961949	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_54900924_54903707_54903793_54905488_54905568_54912665_54912816_54913747_54913874_54914638_54914744_54915745_54915863_54930072_54930207_54936648_54936710_54937108_54937227_54938923_54939021_54947260_54947313_54949550_54949624_54950044_54950127_54960565_54960628_54961234
transcript_89032.known	chr17	+	2168	16	FSM	ENSG00000141198.16	ENST00000575882.6	2168	16	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_12	80.4601764850165	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATACTTTTTTTTTTTA	54896655	True	NA	NA	False	AATAAA	-16	NA	54900851	54961956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_54900924_54903707_54903793_54905488_54905568_54912665_54912816_54913747_54913874_54914638_54914744_54915745_54915863_54930072_54930207_54936648_54936710_54937108_54937227_54938923_54939021_54947260_54947313_54949517_54949624_54950044_54950127_54960565_54960628_54961234
transcript_89033.known	chr17	+	1849	10	FSM	ENSG00000141198.16	ENST00000575333.5	1849	10	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_1	31.7260651495981	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGTTTTCTTAGAACT	54896660	True	NA	9	True	AGTAAA	-20	NA	54900856	54938033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_54900924_54903707_54903793_54905488_54905568_54912665_54912816_54913747_54913874_54914638_54914744_54915745_54915863_54930072_54930207_54936648_54936710_54937108
transcript_89034.known	chr17	+	2337	7	FSM	ENSG00000141198.16	ENST00000572405.5	2337	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	156.245533269488	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTACTTTAAACATATTT	54896637	True	NA	NA	False	AATAAA	-29	NA	54900833	54917452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_54900924_54903712_54903793_54905488_54905568_54912665_54912816_54913747_54913874_54914638_54914744_54915745
transcript_89035.known	chr17	+	15590	18	FSM	ENSG00000166263.13	ENST00000376352.6	15590	18	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_13	12.3965616396011	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTATTGGTTTTTGTGTGAA	54966616	True	NA	8	True	AATAAA	-18	NA	54968764	55173632	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_54968816_54985613_54985692_54986141_54986267_54990824_54990958_54999344_54999452_54999631_54999843_55000807_55000884_55007505_55007598_55031167_55031265_55034167_55034260_55043235_55043326_55047088_55047155_55072899_55073077_55078077_55078195_55078685_55078736_55081049_55081184_55141309_55141368_55159796
transcript_89043.known	chr17	-	2641	8	FSM	ENSG00000108960.9	ENST00000649377.1	2641	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	150.849702197456	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATAAAGTTGTTACTTGG	-55419540	True	NA	-40	True	NA	NA	NA	55421835	55392642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_55394535_55401468_55401539_55403766_55403869_55404454_55404548_55407745_55407821_55411256_55411418_55414150_55414233_55421669
transcript_89045.known	chr17	-	2569	7	FSM	ENSG00000108960.9	ENST00000262065.8	2569	7	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_6	28.7039486250005	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTCCACTGTCTCTAAA	-55419540	True	NA	-19	True	AATAAA	-14	NA	55421835	55392621	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_55394535_55401468_55401539_55403766_55403869_55407745_55407821_55411256_55411418_55414150_55414233_55421669
transcript_89048.known	chr17	-	570	2	FSM	ENSG00000108960.9	ENST00000577038.1	570	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACAAACCCTGTTCAATT	-55419502	False	NA	NA	False	AAAAAG	-9	NA	55421797	55420091	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_55420534_55421669
transcript_89050.known	chr17	+	2680	6	FSM	ENSG00000141179.14	ENST00000576183.5	2680	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	45.3854602268171	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTACTTGTCCTGTGTAC	55748285	True	NA	10	True	AATAAA	-11	NA	55751060	55777368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_55751245_55767334_55767453_55771105_55771186_55773723_55773896_55774791_55774860_55775310
transcript_89052.known	chr17	+	1972	6	FSM	ENSG00000141179.14	ENST00000268896.10	1972	6	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_5	23.0963200532033	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCTGTGTACCACTTC	55748275	True	NA	16	True	AATAAA	-17	NA	55751050	55777374	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_55751245_55767334_55767453_55771105_55771186_55773723_55773896_55774791_55774860_55776034
transcript_89053.known	chr17	+	919	6	FSM	ENSG00000141179.14	ENST00000573500.5	919	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	53.1473423606487	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGGAGCTCGCATTCTA	55748318	True	NA	NA	False	AATAAA	-20	NA	55751093	55823090	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_55751245_55767334_55767453_55771105_55771186_55773723_55773896_55774791_55774860_55822760
transcript_89054.known	chr17	+	1856	6	FSM	ENSG00000141179.14	ENST00000325214.10	1856	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	53.1804475347848	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCTGTGTACCACTTC	55751374	True	NA	16	True	AATAAA	-17	NA	55751399	55777374	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_55751478_55767334_55767453_55771105_55771186_55773723_55773896_55774791_55774860_55776034
transcript_89056.known	chr17	+	8608	12	FSM	ENSG00000153933.10	ENST00000284061.8	8608	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	3.69498207870938	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCTGCTTTCTTTTAAA	56833304	True	NA	18	True	AATAAA	-15	NA	56834150	56869567	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_56834261_56834777_56835260_56844018_56844179_56845689_56845810_56847921_56848066_56848695_56848854_56849180_56849233_56856511_56856626_56858593_56858666_56861790_56861919_56862139_56862252_56862611
transcript_89059.known	chr17	-	2915	10	FSM	ENSG00000121060.19	ENST00000537230.3	2915	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12.9185482500507	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGCCTCCAGCTAAGCTG	-56909426	True	NA	NA	False	NA	NA	NA	56914032	56890667	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_56891301_56891354_56892230_56895342_56895442_56895520_56895605_56895925_56895953_56899114_56899181_56901418_56901579_56904254_56904489_56908467_56908564_56913391
transcript_89061.known	chr17	-	5745	9	FSM	ENSG00000121060.19	ENST00000316881.9	5745	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	10.5445483544816	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGAGTTCTGTGATTTT	-56909443	True	NA	-6	True	AATAAA	-17	NA	56914049	56887908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_56892230_56895342_56895442_56895520_56895605_56895925_56895953_56899114_56899181_56901418_56901579_56904254_56904489_56908467_56908564_56913391
transcript_89072.known	chr17	+	1843	2	FSM	ENSG00000153933.10	ENST00000572810.1	1843	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTATTGTTCTATTTCC	56833260	True	NA	NA	False	AATAAA	-13	NA	56834106	56836466	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_56834261_56834777
transcript_89073.known	chr17	+	348	1	FSM	ENSG00000274213.1	ENST00000619432.1	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTTTTTTTCTTCTTCTT	56913942	True	NA	9	True	AATAAA	-20	NA	56914185	56914533	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_56914200_56914500
transcript_89076.known	chr17	-	2634	7	FSM	ENSG00000121058.5	ENST00000240316.5	2634	7	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_3	17.410884207555	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTCTACCGAGTTATCAT	-56960093	True	NA	-15	True	AATAAA	-17	NA	56961050	56938198	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_56939155_56942034_56942124_56946441_56946512_56949386_56949435_56949680_56949768_56949888_56950997_56960774
transcript_89079.nic	chr17	-	587	2	ISM	ENSG00000121058.5	ENST00000240316.5	2634	7	7	12480	7	234	5prime_fragment	FALSE	canonical	3	350	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAGAAATGTGAATATAAAA	-56960086	True	NA	NA	False	AAGAAA	-16	NA	56961043	56950678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_56950997_56960774
transcript_89080.nic	chr17	-	537	2	ISM	ENSG00000121058.5	ENST00000240316.5	2634	7	-5	12542	-5	172	5prime_fragment	FALSE	canonical	3	350	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACCTGTGGCACAGTGGG	-56960098	True	NA	NA	False	AATAAA	-1	NA	56961055	56950740	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_56950997_56960774
transcript_89084.known	chr17	+	1915	13	FSM	ENSG00000121064.13	ENST00000576154.5	1915	13	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_9	86.2518920887472	286	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTGGAGCATTCTACT	56974383	True	NA	14	True	AATAAA	-23	NA	56978147	57006768	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_56978236_56981081_56981231_56985377_56985468_56987694_56987851_56988215_56988291_56991098_56991172_56994980_56995019_56995506_56995636_56996961_56997056_56998373_56998499_57000854_57000993_57002017_57002182_57006172
transcript_89113.known	chr17	+	3909	11	FSM	ENSG00000121057.13	ENST00000337714.8	3909	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	146.055503148632	367	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGCTTTGAGTCCATTT	57076810	True	NA	17	True	CATAAA	-17	NA	57085245	57121344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_57085399_57105440_57107179_57110024_57110159_57111797_57111925_57112490_57112619_57114458_57114637_57116110_57116262_57116859_57116928_57118380_57118455_57118981_57119045_57120249
transcript_89125.known	chr17	+	2247	15	FSM	ENSG00000153944.12	ENST00000675656.1	2247	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	5.53698142179528	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTGTTTGGCTTGGGTG	57256752	False	NA	NA	False	TTTAAA	-11	NA	57256781	57680738	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_57256805_57257097_57257139_57257465_57257548_57258269_57258355_57262150_57262193_57401378_57401472_57529675_57529725_57596867_57596951_57615969_57616085_57627228_57627304_57650649_57650674_57652098_57652162_57674917_57675127_57676986_57677060_57679548
transcript_89129.known	chr17	+	6379	14	FSM	ENSG00000153944.12	ENST00000284073.7	6379	14	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_1	3.5617959700893	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTTGGTGTTCTTTCAC	57256320	True	NA	19	True	AATAAA	-25	NA	57256522	57684689	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_57256805_57257097_57257139_57257465_57257548_57258269_57258355_57262150_57262193_57401378_57401472_57529675_57529725_57596867_57596951_57615969_57616085_57627228_57627304_57652098_57652162_57674971_57675127_57676986_57677060_57679548
transcript_89137.known	chr17	+	534	6	FSM	ENSG00000153944.12	ENST00000581523.5	534	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	4.99599839871872	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGTGTATGGGTGTGTGA	57256713	False	NA	15	True	AATAAA	-28	NA	57256742	57274489	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_57256805_57257097_57257139_57257465_57257548_57258269_57258355_57262150_57262193_57274267
transcript_89139.known	chr17	-	5609	5	FSM	ENSG00000181610.13	ENST00000313608.13	5609	5	0	0	0	0	multi-exon	FALSE	canonical	3	780	junction_4	64.5155020130821	285	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGCAGATTTCTTTTT	-57838020	True	NA	-6	True	AATAAA	-22	NA	57850044	57834780	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_57839936_57840925_57841053_57841182_57841261_57849239_57849411_57849966
transcript_89144.known	chr17	-	3710	11	FSM	ENSG00000180891.13	ENST00000577830.6	3710	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_9	6.99714227381436	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGAGGTTGCAGGGAAG	-57955066	True	NA	NA	False	AATAAA	-21	NA	57955412	57861242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_57863286_57866473_57866545_57867356_57867416_57868149_57868244_57869121_57869194_57871285_57871370_57872662_57872856_57873590_57873718_57879610_57879739_57885228_57885880_57955224
transcript_89155.known	chr17	-	4630	6	FSM	ENSG00000136451.9	ENST00000581208.2	4630	6	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_3	18.9272290629136	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATGATGGATTGTTTAA	-57985189	True	NA	-5	True	ATTAAA	-17	NA	57988254	57971551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_57974901_57979151_57979314_57980602_57980787_57981872_57981937_57982698_57983394_57988078
transcript_89173.known	chr17	-	1317	5	FSM	ENSG00000136450.13	ENST00000584773.5	1317	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	690.719326137614	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCCAACAAGATAGAGTAT	-57975892	True	NA	NA	False	NA	NA	NA	58007261	58004587	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58005042_58005413_58005601_58005800_58005974_58006342_58006528_58006943
transcript_89174.known	chr17	-	5343	4	FSM	ENSG00000136450.13	ENST00000258962.5	5343	4	0	0	0	0	multi-exon	FALSE	canonical	3	1335	junction_1	199.707007610872	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGCCTTCATTTTGCAC	-57975877	True	NA	-10	True	ATTAAA	-19	NA	58007246	58000918	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58005601_58005800_58005974_58006342_58006528_58006943
transcript_89178.known	chr17	-	1720	4	FSM	ENSG00000136450.13	ENST00000581979.5	1720	4	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_1	640.901621849164	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCCAAAGATTTTTTTTT	-57975863	True	NA	NA	False	NA	NA	NA	58007232	58003806	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58004002_58004922_58005974_58006342_58006528_58006943
transcript_89183.known	chr17	-	3117	3	FSM	ENSG00000136450.13	ENST00000582730.6	3117	3	0	0	0	0	multi-exon	FALSE	canonical	3	1591	junction_2	116.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAATGGTATTAGCCATCT	-57975892	True	NA	-8	True	ATTAAA	-17	NA	58007261	58003359	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58005974_58006342_58006528_58006943
transcript_89184.known	chr17	-	689	2	FSM	ENSG00000136450.13	ENST00000578430.1	689	2	0	0	0	0	multi-exon	FALSE	canonical	3	1591	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAAATTGCTTTAGTTTT	-58006710	False	NA	NA	False	NA	NA	NA	58007346	58006241	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58006528_58006943
transcript_89186.known	chr17	+	6807	3	FSM	ENSG00000264364.3	ENST00000579991.3	6807	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	4.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTGCAGATAGTTTAGT	58081981	True	NA	NA	False	ATTAAA	-21	NA	58083418	58095542	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_58083684_58087081_58087223_58089141
transcript_89191.known	chr17	-	2343	18	FSM	ENSG00000011143.19	ENST00000393119.7	2343	18	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_3	20.5229216102066	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTTCTGTTGGCTGTT	-58217779	True	NA	-5	True	CATAAA	-16	NA	58219255	58205440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58206171_58206282_58206381_58206464_58206548_58207084_58207219_58207893_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_89194.known	chr17	-	2403	18	FSM	ENSG00000011143.19	ENST00000675753.2	2403	18	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_14	37.5303337522742	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTTCTGTTGGCTGTT	-58217779	True	NA	-5	True	CATAAA	-16	NA	58219255	58205440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58206171_58206282_58206381_58206464_58206548_58207084_58207219_58207893_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214899_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_89202.known	chr17	-	3592	17	FSM	ENSG00000011143.19	ENST00000677160.1	3592	17	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_3	20.1880804870102	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTTCTGTTGGCTGTT	-58217779	True	NA	-5	True	CATAAA	-16	NA	58219255	58205440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58206171_58206282_58206381_58206464_58206548_58207084_58207219_58207893_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58216244_58216665_58216737_58218619_58218730_58219150
transcript_89203.known	chr17	-	1926	17	FSM	ENSG00000011143.19	ENST00000393120.6	1926	17	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_13	39.6923717482339	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGATCTGCTGTTCTCCA	-58217760	True	NA	NA	False	NA	NA	NA	58219236	58205740	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58206171_58206282_58206381_58206464_58206548_58207084_58207219_58207893_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_89204.known	chr17	-	2214	17	FSM	ENSG00000011143.19	ENST00000676787.1	2214	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	40.5352855546868	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTTCTGTTGGCTGTT	-58217779	True	NA	-5	True	CATAAA	-16	NA	58219255	58205440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58206171_58206282_58206381_58206464_58206548_58207084_58207219_58207893_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_89207.known	chr17	-	3018	17	FSM	ENSG00000011143.19	ENST00000677709.1	3018	17	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_3	20.6666246639358	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTTCTGTTGGCTGTT	-58217779	True	NA	-5	True	CATAAA	-16	NA	58219255	58205440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58206171_58206282_58206381_58206464_58206548_58207084_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_89216.known	chr17	-	2260	17	FSM	ENSG00000011143.19	ENST00000678463.1	2260	17	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	38.6316236230112	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTTCTGTTGGCTGTT	-58217779	True	NA	-5	True	CATAAA	-16	NA	58219255	58205440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58206171_58206282_58206381_58207084_58207219_58207893_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_89230.known	chr17	-	2126	16	FSM	ENSG00000011143.19	ENST00000313863.11	2126	16	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	39.544854982103	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTTCTGTTGGCTGTT	-58217779	True	NA	-5	True	CATAAA	-16	NA	58219255	58205440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58206171_58206282_58206381_58207893_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_89243.known	chr17	-	2023	15	FSM	ENSG00000011143.19	ENST00000678568.1	2023	15	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_13	51.1798050893083	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTTCTGTTGGCTGTT	-58217769	True	NA	-5	True	CATAAA	-16	NA	58219245	58205440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58206171_58206282_58206381_58207084_58207219_58207893_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58218619_58218730_58219150
transcript_89252.known	chr17	-	3639	15	FSM	ENSG00000011143.19	ENST00000677416.1	3639	15	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_11	18.9951658726796	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTTCTGTTGGCTGTT	-58217779	True	NA	-5	True	CATAAA	-16	NA	58219255	58205440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58206171_58206282_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_89254.known	chr17	-	1467	15	FSM	ENSG00000011143.19	ENST00000580127.6	1467	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	42.0602701671139	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAGGCATTGTGCCATAC	-58217779	True	NA	-7	True	AATAAA	-21	NA	58219255	58207560	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58207730_58207893_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_89259.known	chr17	-	1626	14	FSM	ENSG00000011143.19	ENST00000585134.2	1626	14	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_10	19.2698065321628	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGCCAGGCATTGTGC	-58217779	True	NA	-12	True	AATAAA	-16	NA	58219255	58207565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_89265.known	chr17	-	1289	12	FSM	ENSG00000011143.19	ENST00000581761.6	1289	12	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	46.3235120494446	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTCTTTTTCTGAATG	-58217779	True	NA	NA	False	AATAAA	-29	NA	58219255	58208653	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58208894_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_89266.known	chr17	-	3160	7	FSM	ENSG00000011143.19	ENST00000678928.1	3160	7	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	14.2760483172184	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCACATCCCTACAAAAAAA	-58217779	True	NA	NA	False	NA	NA	NA	58219255	58211759	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58212435_58212981_58213091_58213764_58213870_58214258_58216244_58216665_58216737_58218619_58218730_58219150
transcript_89282.known	chr17	-	5575	9	FSM	ENSG00000108375.13	ENST00000584437.5	5575	9	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	3.69966214673719	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTCTGGTCTTGTGGTT	-58417203	True	NA	-4	True	AATATA	-29	NA	58417533	58353675	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58354987_58357467_58358824_58360148_58360252_58360782_58360945_58362543_58362649_58363274_58363407_58363525_58363601_58370910_58371034_58415325
transcript_89286.known	chr17	-	1643	5	FSM	ENSG00000213246.7	ENST00000577396.5	1643	5	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_4	210.874962951983	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTGATTGTAGAAACGAAG	-58352411	False	NA	-73	True	AAAAAG	-37	NA	58352423	58345246	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58346314_58347187_58347242_58347528_58347585_58351401_58351509_58352064
transcript_89288.known	chr17	-	1401	4	FSM	ENSG00000213246.7	ENST00000581166.5	1401	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	275.531405751786	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGCCATTTTTCAATAC	-58340863	True	NA	-1	True	TATAAA	-24	NA	58352167	58345174	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58346314_58347187_58347242_58351401_58351509_58352066
transcript_89290.known	chr17	-	539	3	FSM	ENSG00000213246.7	ENST00000581204.1	539	3	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_2	57.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTGCCTTGCCTCCCTC	-58347599	False	NA	-7	True	AATAAA	-32	NA	58347611	58345911	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58346314_58347187_58347242_58347528
transcript_89294.known	chr17	-	5839	19	FSM	ENSG00000108389.10	ENST00000323456.9	5839	19	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_18	23.3595091272626	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTTGTTGGGTCGTTT	-58517056	True	NA	-8	True	AATAAA	-15	NA	58517905	58489536	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58491841_58492510_58492600_58492841_58492953_58494931_58496331_58503743_58503899_58504049_58504221_58504302_58504489_58504778_58504975_58505471_58505584_58506742_58506872_58507122_58507320_58508160_58508275_58508467_58508565_58508680_58508842_58511428_58511512_58512389_58512507_58512851_58512942_58516579_58516619_58517816
transcript_89296.known	chr17	-	5987	18	FSM	ENSG00000108389.10	ENST00000682306.1	5987	18	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_17	12.8908110831174	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTTGTTGGGTCGTTT	-58512908	True	NA	-8	True	AATAAA	-15	NA	58514638	58489536	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58491841_58492510_58492600_58492841_58492953_58494931_58496331_58503743_58503899_58504049_58504221_58504302_58504489_58504778_58504975_58505471_58505584_58506742_58506872_58507122_58507320_58508160_58508275_58508467_58508565_58508680_58508842_58511428_58511512_58512389_58512507_58512851_58512942_58514362
transcript_89304.known	chr17	-	1281	5	FSM	ENSG00000108389.10	ENST00000582390.5	1281	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	32.3370917059652	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGCTGAGATAGGAGGAC	-58512894	True	NA	NA	False	NA	NA	NA	58514624	58510596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58510632_58510734_58511512_58512389_58512507_58512851_58512942_58514362
transcript_89308.known	chr17	-	1530	12	FSM	ENSG00000108387.16	ENST00000317256.10	1530	12	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_11	17.1907143876287	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTCTGCTCAGGCCCCT	-58531527	True	NA	-113	True	TTTAAA	-42	NA	58532046	58520358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58520486_58520742_58520843_58520997_58521161_58521253_58521351_58521544_58521647_58521735_58521854_58521966_58522102_58525077_58525202_58525694_58525782_58526219_58526314_58526681_58526979_58531960
transcript_89310.nic	chr17	-	1445	12	NIC	ENSG00000108387.16	novel	1530	12	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_10	24.0206522712684	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTGGTGTCCCTGTGTG	-58531566	True	NA	-12	True	AATAAA	-21	NA	58532085	58520257	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_58520486_58520742_58520843_58520997_58521161_58521253_58521351_58521544_58521647_58521735_58521854_58521966_58522102_58525077_58525202_58525694_58525782_58526219_58526314_58531479_58531552_58531960
transcript_89313.nic	chr17	-	1383	11	NIC	ENSG00000108387.16	novel	1530	12	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_10	16.4255897915417	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTGGTGTCCCTGTGTG	-58531576	True	NA	-12	True	AATAAA	-21	NA	58532095	58520257	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_58520486_58520742_58520843_58520997_58521161_58521253_58521351_58521544_58521647_58521735_58521854_58521966_58522102_58525077_58525202_58525694_58525782_58526219_58526314_58531960
transcript_89322.known	chr17	+	2562	9	FSM	ENSG00000108384.15	ENST00000337432.9	2562	9	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_6	10.8050913924872	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGTTTCAAAATCACCTA	58690445	True	NA	5	True	AATAAA	-19	NA	58692601	58735611	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_58692789_58694930_58695190_58696692_58696860_58703195_58703330_58709858_58709991_58720745_58720813_58724039_58724101_58732483_58732545_58734117
transcript_89330.known	chr17	+	567	2	FSM	ENSG00000108384.15	ENST00000421782.3	567	2	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTACTTCATTATCC	58690471	True	NA	7	True	ATTAAA	-18	NA	58692627	58695336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_58692789_58694930
transcript_89332.known	chr17	+	6560	7	FSM	ENSG00000175175.6	ENST00000308249.4	6560	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	3.85861230093008	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTCATTTGTCTTTTTAT	58755140	True	NA	13	True	AATAAA	-21	NA	58755853	58985179	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_58756462_58955648_58955768_58965693_58965894_58969538_58969728_58972131_58972276_58972831_58972926_58979973
transcript_89342.known	chr17	-	3622	25	FSM	ENSG00000108395.14	ENST00000393066.7	3622	25	0	0	0	0	multi-exon	TRUE	canonical	3	57	junction_1	60.8286385174688	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCATTGCTAAAGTGAAGC	-59106886	False	NA	-10	True	AATAAA	-20	NA	59106921	58982650	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58982922_58999380_58999460_59001597_59001715_59012327_59012447_59015609_59015800_59017295_59017425_59028414_59028724_59031895_59032091_59041812_59041899_59047682_59047820_59049177_59049394_59051213_59051329_59056874_59057055_59061031_59061109_59062566_59062649_59064354_59064406_59070822_59070948_59075646_59075715_59079753_59079878_59081096_59081220_59084001_59084090_59088290_59088408_59091299_59091341_59104292_59104395_59106440
transcript_89357.known	chr17	-	4489	24	FSM	ENSG00000108395.14	ENST00000262294.12	4489	24	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_15	32.6202298441483	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTCTGCTGTTTATTA	-59099954	True	NA	-3	True	AATAAA	-16	NA	59106880	58998201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58999460_59001597_59001715_59012327_59012447_59015609_59015800_59017295_59017425_59028414_59028724_59031895_59032091_59041812_59041899_59047682_59047820_59049177_59049394_59051213_59051329_59056874_59057055_59061031_59061109_59062566_59062649_59064354_59064406_59070822_59070948_59075646_59075715_59079753_59079878_59081096_59081220_59084001_59084090_59088290_59088408_59091299_59091341_59104292_59104395_59106440
transcript_89358.nic	chr17	-	4536	24	NIC	ENSG00000108395.14	novel	4489	24	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	66.8788086560981	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTCTGCTGTTTATTA	-59106865	False	NA	-3	True	AATAAA	-16	NA	59106900	58998201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_58999460_59001597_59001742_59012327_59012447_59015609_59015800_59017295_59017425_59028414_59028724_59031895_59032091_59041812_59041899_59047682_59047820_59049177_59049394_59051213_59051329_59056874_59057055_59061031_59061109_59062566_59062649_59064354_59064406_59070822_59070948_59075646_59075715_59079753_59079878_59081096_59081220_59084001_59084090_59088290_59088408_59091299_59091341_59104292_59104395_59106440
transcript_89363.nic	chr17	-	4385	23	NIC	ENSG00000108395.14	novel	4310	24	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_1	59.8683300430934	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCTGCTGTTTATTAAA	-59099965	True	NA	-1	True	AATAAA	-18	NA	59106891	58998199	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_58999460_59012327_59012447_59015609_59015800_59017295_59017425_59028414_59028724_59031895_59032091_59041812_59041899_59047682_59047820_59049177_59049394_59051213_59051329_59056874_59057055_59061031_59061109_59062566_59062649_59064354_59064406_59070822_59070948_59075646_59075715_59079753_59079878_59081096_59081220_59084001_59084090_59088290_59088408_59091299_59091341_59104292_59104395_59106440
transcript_89365.known	chr17	-	3548	23	FSM	ENSG00000108395.14	ENST00000393065.6	3548	23	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_22	65.7575844854065	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTTGTGTTTAAATAATC	-59099900	True	NA	NA	False	NA	NA	NA	59106826	58998986	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_58999460_59001597_59001715_59012327_59012447_59015609_59015800_59017295_59017425_59028414_59028724_59031895_59032091_59041812_59041899_59047682_59047820_59049177_59049394_59051213_59051329_59056874_59057055_59061031_59061109_59062566_59062649_59064354_59064406_59070822_59070948_59075646_59075715_59079753_59079878_59081096_59081220_59084001_59084090_59088290_59088408_59091299_59091341_59106440
transcript_89385.nic	chr17	-	2409	19	ISM	ENSG00000108395.14	ENST00000262294.12	4489	24	-25	30505	16	-29720	5prime_fragment	FALSE	canonical	3	252	junction_10	30.3067140016902	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATAAAGACCAAAGGAAGCA	-59106867	True	NA	NA	False	NA	NA	NA	59106905	59028706	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_59028724_59031895_59032091_59041812_59041899_59047682_59047820_59049177_59049394_59051213_59051329_59056874_59057055_59061031_59061109_59062566_59062649_59064354_59064406_59070822_59070948_59075646_59075715_59079753_59079878_59081096_59081220_59084001_59084090_59088290_59088408_59091299_59091341_59104292_59104395_59106440
transcript_89391.nic	chr17	-	2091	16	ISM	ENSG00000108395.14	ENST00000262294.12	4489	24	-26	49502	15	13385	5prime_fragment	FALSE	canonical	3	252	junction_7	27.0714281526155	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATATTGATGAAGAAACTA	-59106871	False	NA	NA	False	AATACA	-9	NA	59106906	59047703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_59047820_59049177_59049394_59051213_59051329_59056874_59057055_59061031_59061109_59062566_59062649_59064354_59064406_59070822_59070948_59075646_59075715_59079753_59079878_59081096_59081220_59084001_59084090_59088290_59088408_59091299_59091341_59104292_59104395_59106440
transcript_89395.known	chr17	-	353	4	FSM	ENSG00000108395.14	ENST00000584889.3	353	4	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_2	36.5270067514739	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTAGTTGCCTTTTAG	-59106433	False	NA	NA	False	NA	NA	NA	59106468	59088225	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_59088408_59091299_59091341_59104292_59104395_59106440
transcript_89396.known	chr17	-	570	4	FSM	ENSG00000182628.13	ENST00000583976.1	570	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	189.501685715164	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGAAATTCTAACAGAGAA	-59143562	True	NA	NA	False	AAGAAA	-11	NA	59155177	59112261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_59112346_59119318_59119496_59131280_59131368_59154955
transcript_89397.known	chr17	-	2809	4	FSM	ENSG00000182628.13	ENST00000330137.12	2809	4	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_2	64.5617705939221	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAGTGTCTTTATGTCTT	-59143571	True	NA	1	True	NA	NA	NA	59155186	59109856	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_59112346_59119318_59119496_59131280_59131368_59155130
transcript_89398.known	chr17	-	583	4	FSM	ENSG00000182628.13	ENST00000583380.5	583	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	223.861564365123	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTTCAGCCAAAAGGATC	-59143559	True	NA	NA	False	AATATA	-6	NA	59155174	59112090	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_59112346_59119298_59119496_59131280_59131368_59155130
transcript_89409.nnic	chr17	-	611	3	ISM	ENSG00000108395.14	ENST00000393065.6	3548	23	-79	89316	16	-77	5prime_fragment	FALSE	canonical	3	43	junction_2	160	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAGGACAAGTATGTCC	-59106867	True	NA	NA	False	AAGAAA	-2	NA	59106905	59088302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_59088408_59091299_59091341_59106440
transcript_89411.known	chr17	-	689	3	FSM	ENSG00000182628.13	ENST00000578105.1	689	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	212.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGCTTTGTAAATTAAAGT	-59143569	True	NA	9	True	CATAAA	-34	NA	59155184	59111887	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_59112346_59119318_59119496_59155130
transcript_89412.known	chr17	-	625	3	FSM	ENSG00000182628.13	ENST00000437036.6	625	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	112.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTACACACGCATGCAC	-59143579	True	NA	NA	False	AATAAA	-42	NA	59155194	59112046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_59112346_59131280_59131368_59154955
transcript_89413.known	chr17	-	595	3	FSM	ENSG00000182628.13	ENST00000581068.5	595	3	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	156	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATGATAATATAGATGTT	-59143633	True	NA	-59	True	NA	NA	NA	59155248	59111955	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_59112346_59131280_59131368_59155130
transcript_89421.known	chr17	+	1338	2	FSM	ENSG00000224738.2	ENST00000451775.2	1524	2	0	186	0	-186	multi-exon	FALSE	canonical	3	14	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAAAAAATCCTCT	59106567	False	NA	NA	False	NA	NA	NA	59106597	59118267	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_59107592_59117923
transcript_89422.known	chr17	-	533	2	FSM	ENSG00000182628.13	ENST00000583927.1	533	2	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTTCTGGTCTATCATA	-59143645	True	NA	-46	True	NA	NA	NA	59155260	59111942	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_59112346_59155130
transcript_89424.known	chr17	-	689	2	FSM	ENSG00000182628.13	ENST00000580541.1	689	2	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTTTGTAAATTAAAGTAT	-59143569	True	NA	11	True	CATAAA	-36	NA	59155184	59111885	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_59112346_59154955
transcript_89434.known	chr17	+	6226	10	FSM	ENSG00000068489.13	ENST00000262293.9	6226	10	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_7	8.20568908339411	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCTTTTTAAACTAGAAA	59150313	True	NA	NA	False	AATAAA	-34	NA	59155745	59206709	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_59155806_59169747_59169881_59185053_59185205_59185439_59185563_59193491_59193735_59194756_59194856_59195330_59195444_59197543_59197604_59197692_59197790_59201562
transcript_89438.known	chr17	+	3221	4	FSM	ENSG00000167447.13	ENST00000300917.10	3221	4	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	3.29983164553722	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAAATACATGGATGATA	59208696	True	NA	-1	True	AATAAA	-23	NA	59210034	59215230	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_59211811_59212340_59212487_59212728_59213602_59214804
transcript_89440.nnic	chr17	+	620	3	NNC	ENSG00000068489.13	novel	1641	11	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	25.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATGGGTAGTGACGTTA	59150265	True	NA	NA	False	NA	NA	NA	59155697	59203852	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_59155806_59169747_59169843_59203435
transcript_89441.nnic	chr17	+	746	3	NNC	ENSG00000068489.13	novel	1641	11	NA	NA	-64	96	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	25.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAATAATCACTGAGAATA	59150235	True	NA	-40	True	AATAAA	-1	NA	59155667	59203948	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_59155806_59169747_59169843_59203435
transcript_89444.nic	chr17	+	2072	3	ISM	ENSG00000167447.13	ENST00000300917.10	3221	4	-22	2374	-9	0	5prime_fragment	FALSE	canonical	3	132	junction_1	2.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTTAAAGAAAAAGAACCTC	59208674	True	NA	NA	False	AATGAA	-36	NA	59210012	59212856	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_59211811_59212340_59212487_59212728
transcript_89446.known	chr17	+	738	4	FSM	ENSG00000153982.11	ENST00000583543.1	738	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	1.4142135623731	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAATACAAAAAATATTA	59220074	False	NA	NA	False	NA	NA	NA	59220681	59249228	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_59220752_59234491_59234535_59245413_59245550_59248739
transcript_89448.known	chr17	+	3241	10	FSM	ENSG00000153982.11	ENST00000284116.9	3241	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	2.62466929133727	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCATTCTTCATTCTTT	59219903	True	NA	NA	False	AATAAA	-17	NA	59220510	59275970	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_59220752_59234491_59234535_59245413_59245550_59248739_59248786_59257121_59257241_59257750_59257841_59267040_59267175_59270935_59270996_59272784_59272837_59273650
transcript_89449.known	chr17	+	5264	5	FSM	ENSG00000175155.11	ENST00000312655.9	5264	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	2.48746859276655	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTGAAGAGCTCATCTG	59331375	True	NA	11	True	AATAAA	-17	NA	59331654	59401729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_59331825_59353214_59353527_59388326_59388371_59389359_59389469_59397100
transcript_89450.known	chr17	+	3193	2	FSM	ENSG00000175155.11	ENST00000582192.1	3193	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGTGA	59331441	True	NA	NA	False	NA	NA	NA	59331720	59356303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_59331825_59353214
transcript_89452.known	chr17	+	3575	18	FSM	ENSG00000108406.10	ENST00000251241.9	3575	18	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_5	22.7454699090628	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTATAATGTGTGTTTT	59562684	True	NA	15	True	AATAAA	-27	NA	59565609	59608345	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_59565784_59566626_59566795_59570517_59570664_59573115_59573236_59573739_59573968_59574187_59574255_59575339_59575472_59577265_59577366_59579471_59579559_59579696_59579880_59586152_59586234_59587895_59588054_59598736_59598852_59599374_59599484_59602521_59602617_59605114_59605185_59605445_59605675_59607032
transcript_89456.known	chr17	+	814	5	FSM	ENSG00000108406.10	ENST00000580218.5	814	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	55.1106840821269	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTCAGTATCAAGTTAAAA	NA	False	NA	NA	False	AATGAA	-37	NA	59565557	59574259	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_59565784_59566626_59566795_59573115_59573236_59573739_59573968_59574187
transcript_89460.known	chr17	+	3686	12	FSM	ENSG00000062716.13	ENST00000262291.9	3686	12	0	0	0	0	multi-exon	TRUE	canonical	3	493	junction_5	52.3675819220597	339	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTATAAGTCTCATTTT	59701450	True	NA	5	True	AATAAA	-36	NA	59707653	59842255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_59707749_59731420_59731523_59735337_59735474_59737452_59737544_59738836_59738948_59764970_59765139_59773753_59773886_59808795_59808877_59811669_59811787_59817711_59817774_59838294_59838398_59839767
transcript_89476.known	chr17	+	8369	32	FSM	ENSG00000141367.12	ENST00000269122.8	8369	32	0	0	0	0	multi-exon	FALSE	canonical	3	969	junction_2	156.406312031479	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACCTGGAGACAAAATTT	59603211	True	NA	NA	False	TATAAA	-3	NA	59619894	59696956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_59620174_59644275_59644484_59647397_59647667_59648239_59648402_59651202_59651317_59655853_59656028_59660390_59660589_59661442_59661644_59663841_59663995_59664786_59664910_59666102_59666241_59666479_59666645_59666796_59666978_59668776_59668941_59673646_59673773_59674700_59674844_59676953_59677189_59679396_59679520_59680911_59681058_59681294_59681479_59681646_59681840_59682270_59682429_59682628_59682794_59682906_59683015_59683094_59683263_59683386_59683537_59683624_59683757_59683874_59683986_59685055_59685227_59685586_59685809_59690635_59690712_59693727
transcript_89478.known	chr17	+	5292	31	FSM	ENSG00000141367.12	ENST00000393043.5	5292	31	0	0	0	0	multi-exon	FALSE	canonical	3	969	junction_2	149.19726315631	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTCTCTACTGTCTGA	59619741	False	NA	NA	False	AATACA	-36	NA	59619857	59690826	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_59620174_59644275_59644484_59647397_59647667_59648239_59648402_59651202_59651317_59655853_59656028_59660390_59660589_59661442_59661644_59663841_59663995_59664786_59664910_59666102_59666241_59666479_59666645_59666796_59666978_59668776_59668941_59673646_59673773_59674700_59674844_59676953_59677189_59679396_59679520_59680911_59681058_59681294_59681479_59681646_59681840_59682270_59682429_59682628_59682794_59682906_59683015_59683094_59683263_59683386_59683537_59683624_59683757_59683874_59683986_59685055_59685227_59685586_59685809_59690635
transcript_89486.nic	chr17	+	2888	17	ISM	ENSG00000141367.12	ENST00000393043.5	5292	31	30	13790	-7	-105	5prime_fragment	FALSE	canonical	3	969	junction_2	79.9206637860322	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTACATAGACAGTAATAAC	59603204	True	NA	NA	False	NA	NA	NA	59619887	59677036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_59620174_59644275_59644484_59647397_59647667_59648239_59648402_59651202_59651317_59655853_59656028_59660390_59660589_59661442_59661644_59663841_59663995_59664786_59664910_59666102_59666241_59666479_59666645_59666796_59666978_59668776_59668941_59673646_59673773_59674700_59674844_59676953
transcript_89493.known	chr17	-	2246	3	FSM	ENSG00000141378.15	ENST00000409433.2	2246	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	10.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTGGCAGTTGTCATC	-59707559	True	NA	-7	True	AATAAA	-17	NA	59707626	59697307	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_59697979_59698870_59700190_59707370
transcript_89494.known	chr17	-	731	2	FSM	ENSG00000141378.15	ENST00000393038.3	731	2	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_1	0	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTGGCAGTTGTCATC	-59700737	True	NA	-7	True	AATAAA	-17	NA	59707430	59697307	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_59697979_59707370
transcript_89495.known	chr17	-	1162	1	FSM	ENSG00000273702.1	ENST00000611877.1	1162	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTGCCTTTTATCTTT	-59619693	False	NA	-1	True	AATAAA	-16	NA	59619714	59618552	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_59618600_59619700
transcript_89496.known	chr17	-	4114	1	FSM	ENSG00000141378.15	ENST00000470557.2	4114	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTATGGTTGGCAGTTGT	-59701358	False	NA	-11	True	AATAAA	-13	NA	59701425	59697311	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_59697300_59701400
transcript_89498.known	chr17	-	2491	9	FSM	ENSG00000108423.15	ENST00000325752.8	2491	9	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	7.53325958665968	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTAAATGTGTACTTAGT	-59891173	True	NA	16	True	AATAAA	-27	NA	59892943	59859478	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_59860425_59863663_59863848_59866608_59866750_59874538_59874704_59878102_59878335_59880893_59881111_59886082_59886231_59890830_59891042_59892696
transcript_89503.known	chr17	-	1769	8	FSM	ENSG00000108423.15	ENST00000340993.10	1769	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	19.6531142051122	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTCAAAGTTCCATTCT	-59891150	True	NA	NA	False	NA	NA	NA	59892920	59860012	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_59860425_59863663_59863848_59866608_59866750_59878102_59878335_59880893_59881111_59886082_59886231_59890830_59891042_59892696
transcript_89520.known	chr17	+	5428	15	FSM	ENSG00000108443.14	ENST00000225577.9	5428	15	0	0	0	0	multi-exon	TRUE	canonical	3	135	junction_10	11.4258925431742	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTCTGCTGAGAAACTG	59889926	True	NA	NA	False	AATAAA	-27	NA	59893120	59950574	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_59893326_59910561_59910612_59912683_59912805_59914634_59914704_59926434_59926583_59930116_59930175_59931621_59931723_59934169_59934261_59934433_59934525_59935192_59935301_59936214_59936278_59936463_59936542_59940835_59940944_59945405_59945519_59946550
transcript_89527.known	chr17	-	2122	9	FSM	ENSG00000189050.16	ENST00000305783.13	2122	9	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_6	7	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGGCTTACTTGATGAT	-59964041	True	NA	NA	False	ATTAAA	-22	NA	59964740	59952239	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_59953112_59954044_59954147_59956487_59956554_59957223_59957383_59958290_59958445_59960067_59960169_59962539_59962617_59962826_59963285_59964607
transcript_89528.known	chr17	-	1893	8	FSM	ENSG00000189050.16	ENST00000482446.5	1893	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	14.0784971368628	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCTCTGGACGTCATA	-59964035	True	NA	1	True	AATAAA	-14	NA	59964734	59952361	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_59953112_59954044_59954147_59956487_59956554_59957223_59957383_59958290_59958445_59962539_59962617_59962826_59963285_59964607
transcript_89530.known	chr17	-	6108	20	FSM	ENSG00000068097.16	ENST00000184956.11	6108	20	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_2	11.8982295756979	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACTGGTTCAGATTTCTA	-60077858	True	NA	NA	False	AATAAA	-34	NA	60078921	60041007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_60044135_60046024_60046230_60047308_60047406_60048263_60048389_60049579_60049703_60050842_60050978_60055514_60055602_60056114_60056238_60057047_60057404_60059421_60059522_60059889_60060097_60066208_60066387_60067433_60067733_60069710_60069849_60070705_60070808_60072214_60072330_60073163_60073280_60073745_60073887_60076129_60076238_60078695
transcript_89540.nic	chr17	-	965	7	ISM	ENSG00000068097.16	ENST00000587003.5	3566	20	-19	26148	-18	98	5prime_fragment	FALSE	canonical	3	101	junction_2	8.82074574826616	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATTTATGTTTATTTAG	-60078925	False	NA	0	True	NA	NA	NA	60078940	60069710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_60069849_60070705_60070808_60072214_60072330_60073163_60073280_60073745_60073887_60076129_60076238_60078695
transcript_89542.known	chr17	-	553	3	FSM	ENSG00000068097.16	ENST00000591074.1	553	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	56	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATATTTTTCCCCTTTCCT	-60077858	True	NA	NA	False	AATAAA	-29	NA	60078921	60075614	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_60075834_60076129_60076238_60078695
transcript_89544.known	chr17	+	1123	8	FSM	ENSG00000167434.10	ENST00000300900.9	1123	8	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_3	2.2314999074019	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCTCAAGTGTGTTTTT	60149627	True	NA	8	True	ATTAAA	-24	NA	60149972	60159546	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_60150093_60155313_60155368_60156559_60156716_60157426_60157573_60157689_60157789_60158060_60158128_60158282_60158447_60159229
transcript_89550.known	chr17	-	6937	34	FSM	ENSG00000170832.13	ENST00000300896.9	6937	34	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_17	30.7835239105697	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGAACTGTATAAAAAGTA	-60388476	True	NA	-52	True	AATAAA	-21	NA	60392133	60177326	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_60179429_60180544_60180638_60181323_60181749_60183164_60183454_60185459_60185652_60190562_60190684_60192843_60192931_60198259_60198445_60205446_60205659_60207020_60207133_60208058_60208211_60208653_60208829_60209369_60209544_60211012_60211119_60211375_60211515_60212023_60212099_60213580_60213663_60214619_60214775_60219669_60219788_60222408_60222550_60223410_60223587_60226038_60226232_60236137_60236241_60252380_60252443_60255174_60255259_60265411_60265475_60265975_60266092_60269449_60269558_60271349_60271482_60288522_60288683_60294682_60294802_60301598_60301705_60345480_60345609_60391881
transcript_89554.nic	chr17	-	2175	16	ISM	ENSG00000170832.13	ENST00000300896.9	6937	34	-15	42244	-15	0	5prime_fragment	FALSE	canonical	3	147	junction_8	11.6267889901822	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGGTGAAAACTA	-60392138	False	NA	NA	False	NA	NA	NA	60392148	60219570	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_60219788_60222408_60222550_60223410_60223587_60226038_60226232_60236137_60236241_60252380_60252443_60255174_60255259_60265411_60265475_60265975_60266092_60269449_60269558_60271349_60271482_60288522_60288683_60294682_60294802_60301598_60301705_60345480_60345609_60391881
transcript_89565.known	chr17	-	6492	13	FSM	ENSG00000062725.10	ENST00000083182.8	6492	13	0	0	0	0	multi-exon	TRUE	canonical	3	55	junction_12	8.30996724154527	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATAGTGTATCTGTTTCC	-60524456	False	NA	-20	True	AATAAA	-16	NA	60526242	60443157	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_60447835_60451879_60452046_60454301_60454493_60456295_60456382_60460662_60460788_60461809_60461916_60461993_60462062_60464020_60464111_60466290_60466460_60479147_60479272_60494465_60494618_60500398_60500488_60525793
transcript_89575.known	chr17	+	932	1	FSM	ENSG00000259349.3	ENST00000661567.1	932	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCAGTCTATATAAATTC	60526078	True	NA	NA	False	AATAAA	-13	NA	60526303	60527235	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_60526300_60527200
transcript_89577.known	chr17	+	4768	6	FSM	ENSG00000170836.13	ENST00000305921.8	4768	6	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_4	6.75277720645365	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAGAATAATTTTTTTTT	60599260	True	NA	NA	False	AATAAA	-17	NA	60600192	60666280	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_60600887_60623520_60623750_60633852_60633978_60647891_60648083_60656598_60656842_60662994
transcript_89581.known	chr17	+	3517	24	FSM	ENSG00000141376.23	ENST00000407086.8	3517	24	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_9	22.42011654093	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGAGTTGCTGGGGTAA	60677296	True	NA	28	True	AATAAA	-22	NA	60677850	61392831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_60677915_60679452_60679541_60683981_60684037_60689685_60689762_60709218_60709326_60747197_60747280_60808003_60808077_60868575_60868684_60874661_60874739_60889694_60889772_60902619_60902704_60910531_60910703_60924406_60924501_60947218_60947353_60989970_60990236_61015750_61015902_61034665_61034791_61037888_61038055_61040791_61040893_61074919_61075021_61078332_61078530_61084466_61084565_61368326_61368495_61391976
transcript_89584.known	chr17	+	227	4	FSM	ENSG00000141376.23	ENST00000626960.2	227	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	15.9234278833282	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGCTAAGCTGAAGAAGA	60677300	True	NA	NA	False	NA	NA	NA	60677854	60688043	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_60677915_60679452_60679541_60683981_60684037_60688019
transcript_89585.known	chr17	-	8182	20	FSM	ENSG00000136492.10	ENST00000259008.7	8182	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	16.0913252382281	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTCTTTAGGGCTGCT	-61861365	True	NA	NA	False	ATTAAA	-15	NA	61863528	61679138	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_61684141_61685835_61686166_61693429_61693513_61715950_61716064_61743012_61743135_61744431_61744592_61776400_61776563_61780260_61780402_61780839_61781006_61784269_61784425_61793596_61793730_61799099_61799300_61801252_61801475_61808466_61808758_61847100_61847221_61849128_61849257_61857057_61857232_61859795_61859908_61861446_61861570_61863283
transcript_8959.known	chr1	+	2549	19	FSM	ENSG00000085999.13	ENST00000442598.5	2549	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	96.7780966954817	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCCTGAGAGCAGTGTG	46242837	True	NA	22	True	AATAAA	-15	NA	46247694	46278473	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_46247747_46248343_46248409_46248511_46248599_46249999_46250120_46258685_46258747_46259963_46260100_46260541_46260612_46260726_46261016_46261260_46261386_46267458_46267610_46270658_46270786_46272465_46272541_46272671_46272803_46273354_46273466_46273623_46273748_46274137_46274217_46274537_46274718_46277816_46277981_46278071
transcript_89590.known	chr17	-	6128	25	FSM	ENSG00000108506.13	ENST00000251334.7	6128	25	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_24	17.3060181407766	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTAGTTTTTGTGTTTCA	-61925602	True	NA	1	True	TATAAA	-25	NA	61927982	61865366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_61867727_61867832_61868010_61869033_61869140_61869272_61869381_61869736_61869989_61872264_61872461_61874912_61875039_61877886_61878089_61881006_61881172_61884900_61885006_61889785_61889895_61891512_61891690_61893764_61893900_61895314_61895384_61897468_61897584_61897667_61897740_61904459_61904586_61907407_61907635_61911519_61911694_61911939_61912071_61919399_61919514_61921724_61921828_61924960_61925100_61926351_61926663_61927653
transcript_89591.known	chr17	-	5837	25	FSM	ENSG00000108506.13	ENST00000647009.1	5837	25	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_24	20.629671188202	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCATATTCTTTATCAAAC	-61925602	True	NA	-22	True	TATAAA	-2	NA	61927982	61865389	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_61867727_61867832_61868010_61869033_61869140_61869272_61869381_61869736_61869989_61872264_61872461_61874912_61875039_61877886_61878089_61881006_61881172_61884900_61885006_61889785_61889895_61891512_61891690_61893764_61893900_61895314_61895384_61897468_61897584_61897667_61897740_61904459_61904586_61907407_61907635_61911519_61911694_61911939_61912071_61919399_61919514_61921724_61921828_61924960_61925100_61926351_61926663_61927921
transcript_89592.known	chr17	-	5878	25	FSM	ENSG00000108506.13	ENST00000444766.7	5878	25	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_24	19.9091251412233	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTGTAGTTTTTGTGTT	-61925636	True	NA	-2	True	TATAAA	-22	NA	61928016	61865369	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_61867727_61867832_61868010_61869033_61869140_61869272_61869381_61869736_61869989_61872264_61872461_61874912_61875039_61877886_61878089_61881006_61881172_61884900_61885006_61889785_61889895_61891512_61891690_61893764_61893900_61895314_61895384_61897468_61897584_61897667_61897740_61904459_61904586_61907407_61907635_61911519_61911694_61911939_61912071_61919399_61919514_61921724_61921828_61924960_61925100_61926351_61926663_61927934
transcript_89601.known	chr17	+	5799	9	FSM	ENSG00000087995.16	ENST00000311506.10	5799	9	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_1	40.071615577613	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTGGCTCTGAATGGTA	62417465	True	NA	NA	False	AATAAA	-16	NA	62423896	62453385	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_62424013_62424218_62424311_62426298_62426655_62427787_62427838_62435231_62435293_62440616_62440757_62444836_62444944_62447700_62447767_62448574
transcript_89605.known	chr17	+	1556	8	FSM	ENSG00000087995.16	ENST00000333483.14	1556	8	0	0	0	0	multi-exon	TRUE	canonical	3	328	junction_1	35.4901538515708	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAATAAAAATAAAAAATA	62417443	True	NA	-17	True	NA	NA	NA	62423874	62448914	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_62424311_62426298_62426655_62427787_62427838_62435231_62435293_62440616_62440757_62444836_62444944_62447700_62447767_62448574
transcript_89609.known	chr17	+	5640	22	FSM	ENSG00000146872.19	ENST00000346027.10	5640	22	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_5	40.9612393519984	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCAGCCTCTTGATTTG	62478752	True	NA	8	True	ATTAAA	-20	NA	62478824	62615481	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_62479291_62481120_62481207_62520772_62520845_62522203_62522274_62523133_62523178_62524235_62524332_62536169_62536338_62552301_62552398_62553662_62553756_62560015_62560127_62565000_62565138_62573214_62573368_62576708_62576776_62578476_62578575_62580110_62580193_62586134_62586227_62596584_62596675_62600650_62600821_62602041_62602181_62606129_62606242_62608040_62608149_62612391
transcript_8961.known	chr1	+	674	5	FSM	ENSG00000173660.12	ENST00000496387.5	674	5	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_2	3267.92895998368	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCCGTCTTTTTTTTTT	46204112	True	NA	18	True	AATAAA	-19	NA	46303708	46316776	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_46303821_46309100_46309128_46309896_46310045_46310154_46310317_46316551
transcript_89611.known	chr17	+	5345	22	FSM	ENSG00000146872.19	ENST00000682203.1	5345	22	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	52.4394478576003	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAAGAAGGATATTAAAAT	62479107	False	NA	-29	True	ATTAAA	-43	NA	62479129	62615444	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_62479291_62481123_62481207_62508407_62508554_62520772_62520845_62522203_62522274_62523133_62523178_62536169_62536338_62552301_62552398_62553662_62553756_62560015_62560127_62565000_62565138_62573214_62573368_62576708_62576776_62578476_62578575_62580110_62580193_62586134_62586227_62596584_62596675_62600650_62600821_62602041_62602181_62606129_62606242_62608040_62608149_62612391
transcript_89615.known	chr17	+	3227	21	FSM	ENSG00000146872.19	ENST00000343388.11	3227	21	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	28.5234552605395	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTCTTGGATTCTCTGA	62479127	False	NA	18	True	AATAAA	-18	NA	62479149	62613489	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_62479291_62481120_62481207_62520772_62520845_62522203_62522274_62523133_62523178_62536169_62536338_62552301_62552398_62553662_62553756_62560015_62560127_62565000_62565138_62573214_62573368_62576708_62576776_62578476_62578575_62580110_62580193_62586134_62586227_62596584_62596675_62600650_62600821_62602041_62602181_62606129_62606242_62608040_62608149_62612391
transcript_89621.known	chr17	+	4903	20	FSM	ENSG00000146872.19	ENST00000682075.1	4903	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	48.1863878895206	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAAGAAGGATATTAAAAT	62479100	True	NA	-29	True	ATTAAA	-43	NA	62479257	62615444	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_62479291_62481123_62481207_62520772_62520845_62522203_62522274_62523133_62523178_62552301_62552398_62553662_62553756_62560015_62560127_62565000_62565138_62573214_62573368_62576708_62576776_62578476_62578575_62580110_62580193_62586134_62586227_62596584_62596675_62600650_62600821_62602041_62602181_62606129_62606242_62608040_62608149_62612391
transcript_89622.known	chr17	+	5079	20	FSM	ENSG00000146872.19	ENST00000682274.1	5079	20	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	44.5541781682007	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAAGAAGGATATTAAAAT	62479139	True	NA	-29	True	ATTAAA	-43	NA	62479205	62615444	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_62479291_62481123_62481207_62520772_62520845_62522203_62522274_62536169_62536338_62552301_62552398_62553662_62553756_62560015_62560127_62565000_62565138_62573214_62573368_62576708_62576776_62578476_62578575_62580110_62580193_62586134_62586227_62596584_62596675_62600650_62600821_62602041_62602181_62606129_62606242_62608040_62608149_62612391
transcript_89630.known	chr17	+	3536	1	FSM	ENSG00000146872.19	ENST00000580203.1	3536	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCAGCCTCTTGATTTG	NA	False	NA	8	True	ATTAAA	-20	NA	62611945	62615481	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_62611900_62615500
transcript_89631.known	chr17	+	5719	30	FSM	ENSG00000011028.14	ENST00000303375.10	5719	30	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	16.169582871117	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCTGCCTTGTCCTGTGG	62626825	True	NA	13	True	AATAAA	-27	NA	62627669	62693597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_62627921_62664547_62664950_62666093_62666268_62666454_62666620_62666756_62666871_62667389_62667534_62671648_62671838_62671997_62672153_62674062_62674171_62675789_62675906_62676382_62676532_62677268_62677487_62678503_62678647_62679799_62679903_62680169_62680309_62680417_62680454_62680799_62680961_62681061_62681130_62681836_62681938_62682234_62682378_62688288_62688404_62688500_62688665_62688851_62688961_62689521_62689761_62689893_62690063_62690155_62690306_62690641_62690762_62690948_62691129_62692111_62692139_62692230
transcript_89638.nnic	chr17	+	3353	17	NNC	ENSG00000011028.14	novel	3238	14	NA	NA	-635	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	22.3032193584245	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTTCTGCCTTGTCCTGT	62679984	True	NA	11	True	AATAAA	-25	NA	62679995	62693595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_62680063_62680169_62680309_62680417_62680454_62680799_62680961_62681061_62681130_62681836_62681938_62682234_62682378_62688288_62688404_62688500_62688665_62688851_62688961_62689521_62689761_62689893_62690063_62690155_62690306_62690641_62690762_62690948_62691129_62692111_62692139_62692230
transcript_89639.known	chr17	+	2025	11	FSM	ENSG00000011028.14	ENST00000584265.1	2025	11	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	6.56429737291052	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCAGGGCTTCCCCATAA	62626840	True	NA	NA	False	NA	NA	NA	62627684	62676604	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_62627921_62664547_62664950_62666093_62666268_62666454_62666620_62666756_62666871_62667389_62667534_62671648_62671838_62671997_62672153_62674062_62674171_62675789_62675906_62676382
transcript_89641.known	chr17	-	3200	6	FSM	ENSG00000008283.16	ENST00000584031.5	3200	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	67.6946083525121	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTCGCCTGTTATCTTC	-63444149	False	NA	-7	True	AATAAA	-13	NA	63446184	63432304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63434595_63435085_63435244_63435687_63435792_63436006_63436153_63437345_63437561_63445897
transcript_89642.known	chr17	-	1193	6	FSM	ENSG00000008283.16	ENST00000582034.5	1193	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	62.8267458969506	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACACGTGGCACAAATGG	-63444271	True	NA	NA	False	NA	NA	NA	63446306	63433963	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63434595_63435085_63435244_63435687_63435792_63436053_63436153_63437345_63437485_63446244
transcript_89643.known	chr17	-	3151	6	FSM	ENSG00000008283.16	ENST00000392976.5	3151	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	49.3169342112828	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTCTCGCCTGTTATCT	-63444149	False	NA	-9	True	AATAAA	-11	NA	63446184	63432306	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63434595_63435085_63435244_63435687_63435792_63436053_63436153_63437345_63437561_63445897
transcript_89644.known	chr17	-	2929	6	FSM	ENSG00000008283.16	ENST00000360793.8	2929	6	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_5	31.5556651015313	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCGCCTGTTATCTTCC	-63444271	True	NA	-6	True	AATAAA	-14	NA	63446306	63432303	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63434595_63435085_63435244_63435687_63435792_63436053_63436153_63437345_63437561_63446244
transcript_8965.known	chr1	+	553	4	FSM	ENSG00000173660.12	ENST00000489056.5	553	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	3178.42564102978	1701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCCGTCTTTTTTTTTT	46204101	True	NA	18	True	AATAAA	-19	NA	46303697	46316776	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_46303821_46309100_46309144_46310154_46310317_46316551
transcript_89666.known	chr17	-	869	5	FSM	ENSG00000008283.16	ENST00000581163.5	869	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	68.2074042901502	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGGTCAGGTCTCCGCC	-63434671	False	NA	NA	False	NA	NA	NA	63436706	63434260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63434595_63435085_63435244_63435687_63435792_63436053_63436153_63436532
transcript_89670.known	chr17	-	753	4	FSM	ENSG00000008283.16	ENST00000577368.5	753	4	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_3	39.5333895446481	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCTAAGCGCTTAGTGC	-63444271	True	NA	NA	False	NA	NA	NA	63446306	63435414	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63435792_63436053_63436153_63437345_63437561_63446244
transcript_89675.known	chr17	+	4962	25	FSM	ENSG00000159640.17	ENST00000290866.10	4962	25	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	5.10650456661784	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATAAGCCCTGTTGACGT	63477023	True	NA	11	True	AATAAA	-22	NA	63477060	63498373	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_63477344_63477930_63478099_63479006_63479101_63479768_63479913_63480336_63480529_63481090_63481189_63481565_63481739_63482465_63482690_63483028_63483174_63483459_63483559_63483848_63483972_63484329_63484542_63485235_63485373_63486556_63486716_63486985_63487074_63488647_63488792_63488940_63489133_63490953_63491052_63491208_63491382_63493435_63493660_63493921_63494067_63494371_63494471_63496393_63496517_63496797_63496986_63497136
transcript_8968.known	chr1	+	687	2	FSM	ENSG00000173660.12	ENST00000486951.1	687	2	0	0	0	0	multi-exon	FALSE	canonical	3	5759	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAACTC	46204110	True	NA	NA	False	NA	NA	NA	46303706	46309673	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_46303821_46309100
transcript_89687.known	chr17	+	2928	14	FSM	ENSG00000173826.15	ENST00000456941.6	2928	14	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_6	3.90569300762649	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCATCCTGGCTAACACGG	63523063	True	NA	NA	False	NA	NA	NA	63523333	63546032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_63523490_63524138_63524370_63530090_63530253_63530336_63530543_63533885_63534312_63535668_63535824_63535982_63536069_63538064_63538265_63538409_63538663_63542240_63542435_63543575_63543661_63544248_63544412_63545077_63545265_63545608
transcript_89689.known	chr17	+	3821	14	FSM	ENSG00000173826.15	ENST00000583023.1	3821	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	4.79644839019074	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGTGTGTAACTTATCTG	63523132	False	NA	4	True	AATAAA	-20	NA	63523402	63546727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_63523490_63524138_63524370_63530090_63530253_63530336_63530543_63533885_63534312_63535668_63536069_63538064_63538265_63538409_63538663_63542240_63542435_63543575_63543661_63544011_63544120_63544248_63544412_63545077_63545265_63545608
transcript_89693.known	chr17	+	2973	13	FSM	ENSG00000173826.15	ENST00000583465.1	2973	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	4.45969605341988	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAAAAATAGCC	63523088	True	NA	NA	False	ACTAAA	-4	NA	63523358	63546076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_63523490_63524138_63524237_63530090_63530253_63530336_63530543_63533885_63534312_63535668_63536069_63538064_63538265_63538409_63538663_63542240_63542435_63543575_63543661_63544248_63544412_63545077_63545265_63545608
transcript_89698.known	chr17	+	3758	13	FSM	ENSG00000173826.15	ENST00000314672.10	3758	13	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	3.22641011376766	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGTGTGTAACTTATCTG	63523087	True	NA	4	True	AATAAA	-20	NA	63523357	63546727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_63523490_63524138_63524370_63530090_63530253_63530336_63530543_63533885_63534312_63535668_63536069_63538064_63538265_63538409_63538663_63542240_63542435_63543575_63543661_63544248_63544412_63545077_63545265_63545608
transcript_8970.known	chr1	+	4347	6	FSM	ENSG00000117481.11	ENST00000474844.6	4347	6	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_5	4.62168800331654	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTCTGTGAAGCCTGGA	46339945	True	NA	12	True	AATAAA	-14	NA	46340806	46365018	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_46340920_46344800_46345145_46346920_46347076_46352867_46353029_46360703_46360829_46361569
transcript_89712.known	chr17	+	1703	6	FSM	ENSG00000173826.15	ENST00000580652.5	1703	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	3.6	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGGTGTGTGCACCAA	63523086	True	NA	NA	False	AATGAA	-3	NA	63523356	63536213	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_63523490_63524138_63524370_63530090_63530253_63530336_63530543_63533885_63534312_63535668
transcript_89715.known	chr17	+	1367	8	FSM	ENSG00000136485.16	ENST00000431926.7	1627	8	260	0	0	0	multi-exon	FALSE	canonical	3	90	junction_7	84.3554191187139	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTTGTGACGAATTC	63543237	True	NA	26	True	AATAAA	-27	NA	63550481	63594279	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_63550816_63578469_63578629_63579336_63579449_63579824_63579944_63583501_63583712_63585210_63585329_63588999_63589238_63594202
transcript_89716.known	chr17	+	6324	7	FSM	ENSG00000136485.16	ENST00000614556.5	6324	7	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_3	26.2641496255934	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATTGACTGAATTTCTTT	63543232	True	NA	13	True	AATAAA	-14	NA	63550476	63594266	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_63550816_63578469_63578629_63579336_63579449_63579824_63579944_63583501_63583712_63585210_63585329_63588999
transcript_8972.known	chr1	+	4344	5	FSM	ENSG00000117481.11	ENST00000307089.7	4344	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	27.6981497577004	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTTGTGAGTATTAATG	46339927	True	NA	NA	False	NA	NA	NA	46340788	46365152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_46340920_46344800_46345145_46352867_46353029_46360703_46360829_46361569
transcript_89727.known	chr17	+	1218	5	FSM	ENSG00000136463.9	ENST00000684587.1	1218	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	99.7029964444399	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTCTTAATAATAACGGTG	63596819	False	NA	-25	True	NA	NA	NA	63601083	63608329	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_63601364_63604536_63604641_63606312_63606441_63607286_63607465_63607801
transcript_89733.known	chr17	+	4148	19	FSM	ENSG00000198231.14	ENST00000583590.5	4148	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	103.318218727326	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGATCGTTTGTCATT	63773307	False	NA	11	True	AGTAAA	-17	NA	63773883	63819317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_63774092_63774188_63774377_63787033_63787271_63792411_63792563_63798037_63798100_63799588_63799626_63800467_63800618_63805070_63805176_63806534_63806655_63807723_63807901_63808819_63808949_63809559_63809660_63810512_63810561_63811075_63811174_63811931_63812209_63813227_63813455_63815562_63815674_63816867_63816967_63817693
transcript_89736.known	chr17	+	4337	19	FSM	ENSG00000198231.14	ENST00000578681.5	4337	19	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	112.906057312165	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGATCGTTTGTCATT	63773286	False	NA	11	True	AGTAAA	-17	NA	63773862	63819317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_63774377_63775107_63775179_63787033_63787271_63792411_63792563_63798037_63798100_63799588_63799626_63800467_63800618_63805070_63805176_63806534_63806655_63807723_63807901_63808819_63808949_63809559_63809660_63810512_63810561_63811075_63811174_63811931_63812209_63813227_63813455_63815562_63815674_63816867_63816967_63817693
transcript_89744.known	chr17	+	2783	17	FSM	ENSG00000198231.14	ENST00000359353.9	2783	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	108.811171732272	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGGATGTGCTAAAGCGTG	63769101	True	NA	NA	False	AAGAAA	-19	NA	63774189	63818398	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_63774377_63792411_63792563_63798037_63798100_63799588_63799626_63800467_63800618_63805070_63805176_63806534_63806655_63807723_63807901_63808819_63808949_63809559_63809660_63810512_63810561_63811075_63811174_63811931_63812209_63813227_63813455_63815562_63815674_63816867_63816967_63817693
transcript_89745.known	chr17	+	2016	16	FSM	ENSG00000198909.8	ENST00000577395.5	2016	16	0	0	0	0	multi-exon	TRUE	canonical	3	44	junction_8	21.0347860037183	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCATGGAGTGGCAGCCC	63620083	False	NA	NA	False	NA	NA	NA	63622709	63693874	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_63622764_63632680_63632803_63646033_63646075_63652556_63652657_63657793_63657908_63666939_63667061_63681765_63681900_63685516_63685579_63688526_63688595_63688788_63688882_63689543_63689736_63690263_63690413_63691101_63691234_63691732_63691863_63692241_63692420_63693548
transcript_89749.known	chr17	-	2195	14	FSM	ENSG00000108588.15	ENST00000403162.7	2195	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_13	254.412026622054	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTATGTCTACATTAAAC	-63755546	True	NA	-49	True	AATAAA	-17	NA	63773570	63746402	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63746962_63751939_63752108_63752319_63752430_63752740_63752800_63754432_63754519_63756239_63756351_63756468_63756571_63760913_63760980_63761229_63761352_63764015_63764191_63764739_63764848_63765911_63766195_63772776_63772864_63773411
transcript_89756.known	chr17	-	2166	13	FSM	ENSG00000266173.7	ENST00000336174.12	2166	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_9	59.7345982008938	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATTGTGTCTGCGTCAG	-63739631	True	NA	-23	True	ATTAAA	-25	NA	63741799	63702831	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63703752_63704004_63704048_63704340_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63723297_63723327_63726637_63726696_63728333_63728414_63741740
transcript_89758.known	chr17	-	3283	13	FSM	ENSG00000108588.15	ENST00000225726.10	3283	13	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_7	42.1178901022673	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGAGTGCCGCCTTGAC	-63755573	True	NA	-6	True	ATTAAA	-14	NA	63773597	63745254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63746962_63751939_63752108_63752319_63752430_63752740_63752800_63754432_63754519_63756239_63756351_63756468_63756571_63760913_63760980_63761229_63761352_63764015_63764191_63764739_63764848_63765911_63766195_63773411
transcript_89762.known	chr17	-	2209	12	FSM	ENSG00000266173.7	ENST00000375840.9	2209	12	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_10	38.8174366545468	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGCATTGTGTCTGCGT	-63739706	True	NA	-26	True	ATTAAA	-22	NA	63741874	63702834	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63703752_63704004_63704048_63704340_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63726637_63726696_63728333_63728414_63741740
transcript_89763.known	chr17	-	2140	12	FSM	ENSG00000266173.7	ENST00000638702.1	2140	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_10	48.1857631318115	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAATGGCATTGTGTCTG	-63739664	True	NA	-29	True	ATTAAA	-19	NA	63741832	63702837	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63703752_63704004_63704048_63704340_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63726637_63726696_63728357_63728414_63741740
transcript_89764.known	chr17	-	1865	12	FSM	ENSG00000266173.7	ENST00000638276.1	1865	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	52.4306704764642	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTATGTGTGTGCCTCAT	-63739631	True	NA	NA	False	NA	NA	NA	63741799	63703012	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63703752_63704004_63704048_63704431_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63726637_63726696_63728333_63728414_63741740
transcript_89769.known	chr17	-	1719	12	FSM	ENSG00000108588.15	ENST00000582252.1	1719	12	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_6	39.4978815207613	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCGTGCCACACTGAGT	-63755546	True	NA	NA	False	AATAAA	-15	NA	63773570	63751769	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63752108_63752319_63752430_63752740_63752800_63754432_63754519_63756239_63756351_63756468_63756571_63760913_63760980_63761229_63761352_63764015_63764191_63764739_63764848_63765911_63766195_63773411
transcript_89773.known	chr17	-	1383	11	FSM	ENSG00000266173.7	ENST00000638309.1	1383	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	70.2638598427385	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTGGCCTGAGTGACAG	-63739628	True	NA	NA	False	NA	NA	NA	63741796	63704483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63704909_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63723297_63723327_63726637_63726696_63728333_63728414_63741740
transcript_89775.known	chr17	-	2153	11	FSM	ENSG00000266173.7	ENST00000638708.1	2153	11	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_9	39.3330649708359	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTCAGCTCAGGGGCTACA	-63739692	True	NA	-10	True	ATTAAA	-38	NA	63741860	63702818	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63703752_63704004_63704048_63704340_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63728333_63728414_63741740
transcript_89776.known	chr17	-	2130	11	FSM	ENSG00000266173.7	ENST00000639835.1	2130	11	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_9	37.8181173513437	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTCAGCTCAGGGGCTACA	-63739693	True	NA	-10	True	ATTAAA	-38	NA	63741861	63702818	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63703752_63704004_63704048_63704340_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63728357_63728414_63741740
transcript_89778.known	chr17	-	1238	11	FSM	ENSG00000266173.7	ENST00000582137.6	1238	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	54.8733997488765	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCTTTGGCCTGGTAACA	-63739707	True	NA	NA	False	NA	NA	NA	63741875	63703657	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63703752_63704004_63704048_63704431_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63728333_63728414_63741740
transcript_89779.known	chr17	-	1925	11	FSM	ENSG00000266173.7	ENST00000640086.1	1925	11	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_2	53.933755663777	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTAGTTTCGTTGTCAG	-63739647	True	NA	-78	True	NA	NA	NA	63741815	63702886	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63703752_63704004_63704048_63704431_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63728357_63728414_63741740
transcript_8978.nnic	chr1	+	1897	15	NNC	ENSG00000117480.16	novel	1046	8	NA	NA	-537	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	49.8076401810823	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTCGTCTGTGTGGTTT	46393670	True	NA	NA	False	AAGAAA	-3	NA	46393779	46413845	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_46393862_46402090_46402205_46405013_46405149_46405371_46405506_46405587_46405795_46406037_46406079_46406243_46406369_46408458_46408585_46409100_46409199_46410397_46410498_46410813_46410855_46411611_46411652_46412142_46412252_46413074_46413221_46413446
transcript_89782.nic	chr17	-	1594	11	ISM	ENSG00000108588.15	ENST00000582252.1	1719	12	-212	549	-185	461	5prime_fragment	FALSE	canonical	3	656	junction_5	41.3158565202272	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGACCCAATGCCTGTATT	-63773768	False	NA	NA	False	GATAAA	-29	NA	63773782	63752318	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_63752430_63752740_63752800_63754432_63754519_63756239_63756351_63756468_63756571_63760913_63760980_63761229_63761352_63764015_63764191_63764739_63764848_63765911_63766195_63773411
transcript_89783.known	chr17	-	2959	10	FSM	ENSG00000266173.7	ENST00000245865.10	2959	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	67.9396972994125	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGCATTGTGTCTGCGT	-63741735	False	NA	-26	True	ATTAAA	-22	NA	63741761	63702834	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63704909_63706634_63706731_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63726637_63726696_63728333_63728414_63741740
transcript_89788.known	chr17	-	1153	9	FSM	ENSG00000266173.7	ENST00000578008.6	1153	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	58.8828285665694	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTGTCCTCCCCAGATG	-63739601	True	NA	NA	False	NA	NA	NA	63741769	63704599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63704909_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63728333_63728414_63741740
transcript_89793.known	chr17	-	914	9	FSM	ENSG00000266173.7	ENST00000639135.1	914	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	63.5255853967518	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGCTGAGGAGCTGACCAT	-63739647	True	NA	NA	False	NA	NA	NA	63741815	63704525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63704583_63706634_63706731_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63728357_63728414_63741740
transcript_89794.known	chr17	-	1168	9	FSM	ENSG00000266173.7	ENST00000579340.5	1168	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	55.3905170132939	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGTGTGTCAGAGGCCA	-63739664	True	NA	NA	False	NA	NA	NA	63741832	63704207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63704583_63706634_63706740_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63726637_63726696_63728333_63728414_63741740
transcript_89808.known	chr17	-	602	5	FSM	ENSG00000136490.9	ENST00000578993.5	602	5	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_2	495.420213051506	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCCTGCTTCCTGCTTCG	-63691793	True	NA	NA	False	NA	NA	NA	63700102	63698334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63698712_63698798_63698819_63699027_63699070_63699256_63699349_63700031
transcript_89809.known	chr17	-	756	5	FSM	ENSG00000136490.9	ENST00000578061.5	756	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_4	477.537433087711	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACCCCCTGGGAGGCCCC	-63699851	False	8309	NA	False	NA	NA	NA	63699861	63698288	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63698712_63698798_63698939_63699027_63699070_63699256_63699349_63699802
transcript_89811.known	chr17	-	3192	5	FSM	ENSG00000136490.9	ENST00000259006.8	3192	5	0	0	0	0	multi-exon	FALSE	canonical	3	1005	junction_4	97.0988542671848	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGAGCCAGCATGTCC	-63691816	True	NA	-29	True	AATAAA	-24	NA	63700125	63695887	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63698712_63698798_63698939_63699027_63699070_63699256_63699349_63700031
transcript_89816.known	chr17	-	566	5	FSM	ENSG00000136490.9	ENST00000584645.1	566	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	492.102377559792	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCACAAGGAGCTCTGGGC	-63701162	False	NA	NA	False	NA	NA	NA	63701172	63698608	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63698712_63698798_63698939_63699027_63699070_63699256_63699349_63700983
transcript_89819.known	chr17	-	1298	5	FSM	ENSG00000136490.9	ENST00000583211.5	1298	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	475.378270433136	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTTCAATAGATCCAGAT	-63691823	True	NA	-35	True	TTTAAA	-2	NA	63700132	63697832	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63698712_63698798_63698939_63699027_63699114_63699256_63699349_63700031
transcript_89825.known	chr17	-	709	4	FSM	ENSG00000136490.9	ENST00000579814.1	709	4	0	0	0	0	multi-exon	FALSE	canonical	3	1005	junction_3	104.156932878549	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCCAGGTGGGAAGGGGA	-63691823	True	NA	NA	False	NA	NA	NA	63700132	63698466	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63698712_63698798_63699070_63699256_63699349_63700031
transcript_89832.known	chr17	-	2788	2	FSM	ENSG00000266173.7	ENST00000578507.2	2788	2	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTAGACTCCGTCTCAAAG	-63739650	True	NA	NA	False	NA	NA	NA	63741818	63725703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63728414_63741740
transcript_89834.known	chr17	+	3959	18	FSM	ENSG00000198231.14	ENST00000389924.7	3959	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	84.0007826623614	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGATCGTTTGTCATT	63769081	True	NA	11	True	AGTAAA	-17	NA	63774169	63819317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_63774377_63787033_63787271_63792411_63792563_63798037_63798100_63799588_63799626_63800467_63800618_63805070_63805176_63806534_63806655_63807723_63807901_63808819_63808949_63809559_63809660_63810512_63810561_63811075_63811174_63811931_63812209_63813227_63813455_63815562_63815674_63816867_63816967_63817693
transcript_89835.known	chr17	-	2019	3	FSM	ENSG00000136490.9	ENST00000578067.5	2019	3	0	0	0	0	multi-exon	FALSE	canonical	3	1160	junction_2	49	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTCTATTGTGTGGCCT	-63691799	True	NA	-18	True	AATAGA	-5	NA	63700108	63697815	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63698712_63698798_63699070_63699256
transcript_89837.known	chr17	-	3551	21	FSM	ENSG00000108592.17	ENST00000427159.7	3551	21	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_20	50.4825464888609	278	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGTCTTTTCTGACAGT	-63827649	False	20	-8	True	AATAAA	-16	NA	63827663	63819432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63819995_63820078_63820174_63820254_63820439_63820838_63820939_63821029_63821116_63821353_63821644_63821722_63821844_63821983_63822169_63823816_63823953_63824083_63824240_63824330_63824412_63824636_63824738_63824824_63824930_63825047_63825164_63825241_63825437_63825535_63825636_63826055_63826136_63826257_63826305_63826566_63826673_63826835_63826929_63827051
transcript_8984.known	chr1	+	2042	15	FSM	ENSG00000117480.16	ENST00000243167.9	2042	15	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_10	26.0294182079604	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTCGTCTGTGTGGTTT	46392636	True	NA	NA	False	AAGAAA	-3	NA	46394316	46413845	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_46394544_46402090_46402205_46405013_46405149_46405371_46405506_46405587_46405795_46406037_46406079_46406243_46406369_46408458_46408585_46409100_46409199_46410397_46410498_46410813_46410855_46411611_46411652_46412142_46412252_46413074_46413221_46413446
transcript_8985.nic	chr1	+	2041	15	NIC	ENSG00000117480.16	novel	2042	15	NA	NA	-47	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_13	48.9335763863544	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTCGTCTGTGTGGTTT	46392589	True	NA	NA	False	AAGAAA	-3	NA	46394269	46413845	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_46394544_46402090_46402205_46405013_46405149_46405371_46405506_46405587_46405795_46406037_46406079_46406243_46406369_46408458_46408585_46409100_46409199_46410397_46410498_46410813_46410855_46411611_46411652_46412142_46412252_46413122_46413221_46413446
transcript_89850.known	chr17	+	1331	12	FSM	ENSG00000087191.13	ENST00000310144.11	1331	12	0	0	0	0	multi-exon	FALSE	canonical	3	1509	junction_7	196.823451535583	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTAGGACTCCAGTCTGTT	63810301	True	NA	29	True	AATAAA	-18	NA	63827430	63832019	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_63827515_63828137_63828210_63829493_63829564_63829851_63829950_63830132_63830190_63830270_63830502_63830808_63830936_63831035_63831227_63831326_63831426_63831505_63831617_63831723_63831811_63831915
transcript_89851.known	chr17	+	1494	12	FSM	ENSG00000087191.13	ENST00000375812.8	1494	12	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	516.336971142485	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCAGTCTGTTAATGAGG	63827658	False	NA	36	True	AATAAA	-25	NA	63827683	63832026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_63827924_63828137_63828210_63829493_63829564_63829851_63829950_63830132_63830190_63830270_63830502_63830808_63830936_63831035_63831227_63831326_63831426_63831505_63831617_63831723_63831811_63831915
transcript_89861.known	chr17	+	2586	11	FSM	ENSG00000087191.13	ENST00000579147.5	2586	11	0	0	0	0	multi-exon	FALSE	canonical	3	1509	junction_6	206.421437840162	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTAGGACTCCAGTCTGTT	63810330	True	NA	29	True	AATAAA	-18	NA	63827459	63832019	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_63827515_63828137_63829564_63829851_63829950_63830132_63830190_63830270_63830502_63830808_63830936_63831035_63831227_63831326_63831426_63831505_63831617_63831723_63831811_63831915
transcript_8987.nnic	chr1	+	2125	15	NNC	ENSG00000117480.16	novel	2042	15	NA	NA	-47	0	at_least_one_novel_splicesite	FALSE	canonical	2	28	junction_2	49.8119422612363	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTCGTCTGTGTGGTTT	46392589	True	NA	NA	False	AAGAAA	-3	NA	46394269	46413845	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_46394544_46402090_46402241_46405013_46405149_46405371_46405506_46405587_46405795_46406037_46406079_46406243_46406369_46408458_46408585_46409100_46409199_46410397_46410498_46410813_46410855_46411611_46411652_46412142_46412252_46413074_46413221_46413446
transcript_89871.known	chr17	-	2342	14	NNC	ENSG00000108604.17	novel	2464	13	NA	NA	11	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_13	233.258675010075	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGCCTGGACCTGGTCC	-63838319	True	NA	-11	True	AATAAA	-16	NA	63842674	63832080	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_63832992_63833068_63833171_63833297_63833421_63833586_63833723_63833908_63834007_63834166_63834329_63834473_63834576_63834704_63834801_63835411_63835568_63836921_63837045_63837194_63837238_63837440_63837626_63842458_63842507_63842617
transcript_89877.known	chr17	-	1800	13	FSM	ENSG00000108604.17	ENST00000225742.13	1800	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_12	239.746567580574	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCGAGGGTCAGAGCTGGC	-63840920	False	4355	NA	False	NA	NA	NA	63842466	63832603	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63832992_63833068_63833171_63833297_63833421_63833586_63833723_63833908_63834007_63834166_63834329_63834473_63834576_63834704_63834801_63835411_63835568_63836921_63837045_63837194_63837238_63837440_63837626_63842380
transcript_89878.known	chr17	-	2464	13	FSM	ENSG00000108604.17	ENST00000448276.7	2464	13	0	0	0	0	multi-exon	FALSE	canonical	3	791	junction_1	46.7297193086655	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGCCTGGACCTGGTCC	-63838330	True	NA	-11	True	AATAAA	-16	NA	63842685	63832080	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63832992_63833068_63833171_63833297_63833421_63833586_63833723_63833908_63834007_63834166_63834329_63834473_63834576_63834704_63834801_63835411_63835568_63836921_63837045_63837194_63837238_63837440_63837626_63842458
transcript_89885.known	chr17	-	794	5	FSM	ENSG00000136487.18	ENST00000456543.6	794	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.56195171219375	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTGTTTGACTAGGTG	-63881816	False	NA	-6	True	AATAAA	-12	NA	63881842	63880217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63880519_63880775_63880937_63881028_63881149_63881358_63881520_63881791
transcript_89886.known	chr17	-	903	5	FSM	ENSG00000136487.18	ENST00000423893.7	903	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_4	1.87082869338697	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTGACTAGGTGTCC	-63881918	True	NA	-3	True	AATAAA	-15	NA	63881944	63880214	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63880519_63880771_63880937_63881028_63881149_63881358_63881520_63881791
transcript_89887.known	chr17	-	1138	4	FSM	ENSG00000136487.18	ENST00000332800.7	1138	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	2.16024689946929	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCATCATTTTGTTTGAC	-63881909	False	NA	-12	True	AATAAA	-6	NA	63881935	63880223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63880937_63881028_63881149_63881358_63881520_63881791
transcript_89888.known	chr17	-	1246	6	FSM	ENSG00000007312.13	ENST00000006750.8	1246	6	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_5	6.93974062915899	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACAGGCTCGTGGCATCT	-63932237	True	NA	-3	True	AATAAA	-21	NA	63932331	63928739	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63929325_63929433_63929476_63929769_63929889_63930073_63930386_63931334_63931386_63932194
transcript_89889.known	chr17	-	1254	6	FSM	ENSG00000007312.13	ENST00000392795.7	1254	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	4.81663783151692	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACAGGCTCGTGGCATCT	-63932242	True	NA	-3	True	AATAAA	-21	NA	63932336	63928739	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_63929325_63929433_63929476_63929769_63929889_63930073_63930386_63931334_63931389_63932194
transcript_89895.known	chr17	+	3128	6	FSM	ENSG00000224383.8	ENST00000412177.6	3128	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	0.748331477354788	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGACTTAGATGGGCATT	63998291	True	NA	24	True	ATTAAA	-21	NA	63998350	64004305	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_63998425_63998706_63998783_63998967_63999075_64001083_64001311_64001466_64001538_64001732
transcript_89900.known	chr17	+	3059	4	FSM	ENSG00000224383.8	ENST00000225760.5	3059	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.88561808316413	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTGGGTGATCACGTTGA	63998395	False	NA	4	True	ATTAAA	-1	NA	63998454	64004285	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_63998783_63998967_63999075_64001466_64001538_64001732
transcript_89902.known	chr17	-	5244	12	FSM	ENSG00000136478.9	ENST00000584379.6	5244	12	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_8	12.2481234858904	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCGTAACTGAGGGGGTAG	-64262529	True	NA	NA	False	TTTAAA	-14	NA	64263260	64147226	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_64149092_64150840_64150962_64152944_64153155_64154841_64154968_64160800_64160934_64171099_64171200_64177324_64177472_64188167_64188416_64193558_64193890_64194894_64195096_64212573_64214243_64263167
transcript_89905.known	chr17	-	5232	12	FSM	ENSG00000136478.9	ENST00000258991.7	5232	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	25.3341307689485	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCGTAACTGAGGGGGTAG	-64262496	True	NA	NA	False	TTTAAA	-14	NA	64263227	64147226	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_64149092_64150840_64150962_64152944_64153155_64154841_64154968_64160800_64160934_64171099_64171200_64177324_64177472_64188167_64188437_64193558_64193890_64194894_64195096_64212573_64214243_64263167
transcript_89916.known	chr17	-	1557	9	FSM	ENSG00000256525.8	ENST00000671755.1	1557	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	78.1824788555595	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATAATAAATATTCTTCT	-64496531	False	NA	-27	True	NA	NA	NA	64496939	64477811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_64477989_64480288_64480390_64482918_64483000_64483389_64483507_64485727_64485869_64490795_64490970_64492666_64492773_64492894_64493022_64496406
transcript_89920.nnic	chr17	-	2363	8	NNC	ENSG00000256525.8	novel	1582	8	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_7	69.3765237008624	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTGTCTTATGTTCAC	-64496660	False	20761	0	True	AATAAA	-17	NA	64497068	64477784	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_64477989_64480288_64480390_64482918_64483000_64485727_64485869_64490795_64490970_64492666_64492773_64492894_64493022_64495639
transcript_89921.known	chr17	-	1582	8	FSM	ENSG00000256525.8	ENST00000539111.7	1582	8	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_7	30.4429878659123	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTGTCTTATGTTCAC	-64496646	False	20761	0	True	AATAAA	-17	NA	64497054	64477784	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_64477989_64480288_64480390_64482918_64483000_64485727_64485869_64490795_64490970_64492666_64492773_64492894_64493022_64496406
transcript_89932.known	chr17	-	1731	5	FSM	ENSG00000256525.8	ENST00000585141.5	1731	5	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_4	18.8331489666492	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGGTCAGGATGGGATCAA	-64496611	False	20761	NA	False	AAGAAA	-31	NA	64497019	64485157	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_64485869_64490795_64490970_64492666_64492773_64492894_64493022_64496406
transcript_8994.nic	chr1	+	2405	14	NIC	ENSG00000117480.16	novel	2042	15	NA	NA	-47	0	intron_retention	FALSE	canonical	3	154	junction_1	22.7811818947286	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTCGTCTGTGTGGTTT	46392589	True	NA	NA	False	AAGAAA	-3	NA	46394269	46413845	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_46394544_46402090_46402205_46405013_46405149_46405371_46405506_46405587_46405795_46406037_46406079_46406243_46406369_46408458_46408585_46409100_46409199_46410397_46410855_46411611_46411652_46412142_46412252_46413074_46413221_46413446
transcript_89941.nic	chr17	-	2874	4	ISM	ENSG00000256525.8	ENST00000585141.5	1731	5	-74	3858	-39	1453	5prime_fragment	FALSE	canonical	3	144	junction_3	18.6607133363712	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATATAGCAAAAACATAGGA	-64496685	False	NA	NA	False	AAAAAG	-13	NA	64497093	64489015	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_64490970_64492666_64492773_64492894_64493022_64496406
transcript_89942.known	chr17	-	565	4	FSM	ENSG00000256525.8	ENST00000578997.1	565	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	73.7744309816529	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTGTGGAACCTAGGAGA	-64496737	False	NA	NA	False	AATAGA	-2	NA	64496755	64490861	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_64490970_64492666_64492773_64492894_64493022_64496531
transcript_89949.nnic	chr17	-	2910	20	NNC	ENSG00000108854.16	novel	6240	19	NA	NA	0	-276	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	33.3138354794075	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATTGGCTAAAAGAATCAT	-64660115	True	NA	-1	True	AATAAA	-30	NA	64662307	64545343	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_64545948_64546262_64546339_64547599_64547802_64551583_64551705_64554855_64554994_64555819_64555999_64557607_64557723_64561499_64561604_64562770_64562967_64571797_64571957_64578491_64578577_64580788_64580992_64583460_64583545_64586085_64586171_64591083_64591150_64593439_64593574_64598381_64598491_64606601_64606641_64661828_64661903_64662170
transcript_89951.known	chr17	-	6240	19	FSM	ENSG00000108854.16	ENST00000262435.14	6240	19	0	0	0	0	multi-exon	TRUE	canonical	3	103	junction_8	13.7849443726852	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGAGTTTGTAATGAATC	-64660115	True	NA	-1	True	AATAAA	-45	NA	64662307	64542281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_64545948_64546262_64546339_64547599_64547802_64551583_64551705_64554855_64554994_64555819_64555999_64557607_64557723_64561499_64561604_64562770_64562967_64571797_64571957_64578491_64578577_64580788_64580992_64583460_64583545_64586085_64586171_64591083_64591150_64593439_64593574_64598381_64598491_64606601_64606641_64661828
transcript_89952.nic	chr17	-	3177	18	NIC	ENSG00000108854.16	novel	6240	19	NA	NA	-38	-276	combination_of_known_junctions	FALSE	canonical	3	14	junction_17	31.6490268358125	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATTGGCTAAAAGAATCAT	-64660153	True	NA	-1	True	AATAAA	-30	NA	64662345	64545343	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_64545948_64546262_64546339_64547599_64547802_64551583_64551705_64554855_64554994_64555819_64555999_64557607_64557723_64561499_64561604_64562770_64562967_64571797_64571957_64578491_64578577_64580788_64580992_64583460_64583545_64586085_64586171_64591083_64591150_64593439_64593574_64598381_64598491_64661828
transcript_89955.known	chr17	-	1716	14	FSM	ENSG00000108854.16	ENST00000585301.1	1716	14	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_13	33.5929338864677	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAATAAAAAAGAATAT	-64659720	False	NA	NA	False	NA	NA	NA	64661912	64554880	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_64554994_64555819_64555999_64557607_64557723_64561499_64561604_64562770_64562967_64571797_64571957_64578491_64578577_64580788_64580992_64583460_64583545_64586085_64586171_64591083_64591150_64593439_64593574_64598381_64598491_64661828
transcript_89958.known	chr17	+	2754	20	FSM	ENSG00000258890.8	ENST00000556440.7	2754	20	0	0	0	0	multi-exon	FALSE	canonical	2	39	junction_4	54.2678286825344	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTATTGCTTTTGAATTTA	64505939	True	NA	14	True	AATAAA	-16	NA	64506976	64537946	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_64507117_64508591_64508721_64510172_64510281_64514247_64514359_64516722_64516829_64519320_64519437_64521401_64521528_64522701_64522896_64525769_64525883_64526070_64526201_64527110_64527265_64529287_64529428_64530925_64531019_64531889_64532023_64532838_64533009_64533116_64533192_64534584_64534738_64536601_64536749_64537040_64537113_64537602
transcript_89966.known	chr17	-	4448	15	FSM	ENSG00000108654.16	ENST00000676785.1	4448	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	1284.18336831988	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATTCTCTCTTTTTATTT	NA	False	NA	-10	True	AATAAA	-14	NA	64507712	64498257	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_64500327_64500548_64500774_64502009_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075_64506263_64506754_64507315_64507477
transcript_89969.known	chr17	-	4747	14	FSM	ENSG00000108654.16	ENST00000677726.1	4747	14	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	1317.3856125186	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCATTCTCTCTTTTTATT	-64506482	False	408	-11	True	AATAAA	-13	NA	64506521	64498258	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_64500327_64500548_64500774_64501056_64501144_64501260_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075
transcript_89970.known	chr17	-	3998	14	FSM	ENSG00000108654.16	ENST00000678814.1	3998	14	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	1311.4695131888	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCATTCTCTCTTTTTATT	-64506482	False	408	-11	True	AATAAA	-13	NA	64506521	64498258	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_64500327_64500548_64500774_64501056_64501144_64502009_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075
transcript_89975.known	chr17	-	3868	14	FSM	ENSG00000108654.16	ENST00000577922.6	3868	14	0	0	0	0	multi-exon	FALSE	canonical	1	35	junction_13	986.46349992607	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATTCTCTCTTTTTATTT	-64506692	False	NA	-10	True	AATAAA	-14	NA	64506731	64498257	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_64500327_64500548_64500774_64502009_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075_64506260_64506513
transcript_89985.known	chr17	-	2021	13	FSM	ENSG00000108654.16	ENST00000578804.5	2021	13	0	0	0	0	multi-exon	FALSE	canonical	2	87	junction_12	1007.67698679796	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATATGTAAATGTCTGTT	-64505917	False	NA	NA	False	NA	NA	NA	64505956	64499913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_64500327_64500548_64500774_64502009_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64505745
transcript_89986.known	chr17	-	3684	13	FSM	ENSG00000108654.16	ENST00000225792.10	3684	13	0	0	0	0	multi-exon	FALSE	canonical	3	3156	junction_10	216.490232651114	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTCTTTTTATTTATTT	-64485528	True	NA	-6	True	AATAAA	-18	NA	64506289	64498253	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_64500327_64500548_64500774_64502009_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075
transcript_89991.known	chr17	-	4283	13	FSM	ENSG00000108654.16	ENST00000676969.1	4283	13	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_2	1013.52776026774	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCTCTCTTTTTATTTA	-64506482	False	408	-9	True	AATAAA	-15	NA	64506521	64498256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_64500327_64500548_64501144_64502009_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075
transcript_89992.known	chr17	-	5031	13	FSM	ENSG00000108654.16	ENST00000676575.1	5031	13	0	0	0	0	multi-exon	FALSE	canonical	1	23	junction_2	1029.8208683229	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCTCTCTTTTTATTTA	-64506482	False	408	-9	True	AATAAA	-15	NA	64506521	64498256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_64500327_64500548_64501892_64502009_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075
transcript_89998.known	chr17	-	3558	12	FSM	ENSG00000108654.16	ENST00000581230.5	3558	12	0	0	0	0	multi-exon	FALSE	canonical	3	3156	junction_9	198.690922401171	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAAATTGTACTTTATTT	-64485528	True	NA	-4	True	AATAAA	-23	NA	64506289	64499615	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_64500327_64500548_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075
transcript_9.known	ERCC-00025	+	1978	1	FSM	ERCC-00025A	DQ883689	1978	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1978	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_ERCC-00025_+_0_2000
transcript_90005.nic	chr17	-	3829	11	NIC	ENSG00000108654.16	novel	3815	12	NA	NA	7	-4	intron_retention	FALSE	canonical	3	3156	junction_8	207.401446475187	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTGGAAATTGTACTTT	-64485581	True	NA	-8	True	AATAAA	-19	NA	64506342	64499619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075
transcript_90039.known	chr17	-	5014	11	FSM	ENSG00000214176.10	ENST00000582986.5	5014	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	7.95550124127952	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGATATATGGTGTACGCT	-64836426	True	NA	NA	False	NA	NA	NA	64837154	64782718	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_64785368_64786566_64786725_64787247_64787312_64792348_64792543_64797263_64797410_64799999_64800918_64804829_64805101_64821766_64822053_64822253_64822394_64829160_64829250_64837055
transcript_90060.known	chr17	-	2259	4	FSM	ENSG00000214174.9	ENST00000397713.5	2259	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_3	70.517137396995	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCTTCTCATCTTACTG	-64973950	True	NA	70	True	AATAAA	-15	NA	64975576	64968037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_64968382_64972533_64972663_64972753_64973518_64974554
transcript_90061.known	chr17	-	6249	4	FSM	ENSG00000120063.10	ENST00000439174.7	6249	4	0	0	0	0	multi-exon	TRUE	canonical	3	152	junction_1	8.37987005998436	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTATGATGTTATTTAACA	-65052992	True	NA	-12	True	AATAAA	-19	NA	65056740	65009288	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_65014830_65018252_65018304_65053501_65053729_65056310
transcript_90063.nnic	chr17	-	4453	2	NNC	ENSG00000120063.10	novel	6249	4	NA	NA	-99	-1429	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	0	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTCTGTTACCATTTCAT	-65053091	False	NA	-18	True	AATAAA	-12	NA	65056839	65010717	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_65014642_65056310
transcript_90066.known	chr17	+	2387	19	FSM	ENSG00000108370.17	ENST00000584234.5	2387	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	5.40375955090071	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTTAACTTTAAGTTTCT	65137028	True	NA	-9	True	NA	NA	NA	65137453	65227678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_65137598_65153421_65153519_65158294_65158346_65160232_65160340_65160535_65160588_65160850_65160910_65163012_65163090_65168199_65168282_65177731_65177804_65189285_65189316_65190174_65190237_65193542_65193657_65197125_65197242_65201992_65202081_65204162_65204302_65207921_65208012_65210487_65210606_65225001_65225487_65227274
transcript_90068.known	chr17	+	645	10	FSM	ENSG00000108370.17	ENST00000577186.1	645	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_9	5.2068331172711	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAGTATTAAGAAGAATA	65137166	False	NA	NA	False	NA	NA	NA	65137591	65180037	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_65137598_65153421_65153519_65158294_65158346_65160232_65160340_65160535_65160588_65160850_65160910_65163012_65163090_65168199_65168282_65177731_65177804_65179995
transcript_90071.known	chr17	+	2736	3	FSM	ENSG00000108370.17	ENST00000638125.1	2736	3	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	2	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTGATTTCGTTGATT	65099038	True	NA	16	True	TATAAA	-19	NA	65100811	65113130	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_65101043_65101206_65101297_65110715
transcript_90073.nic	chr17	-	4472	11	NIC	ENSG00000168646.14	novel	4260	11	NA	NA	-68	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_10	29.9634777687771	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGCCTCGTCTTTGAAT	-65560323	False	1000	-1	True	ATTAAA	-19	NA	65560364	65528562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_65530103_65533911_65534080_65535625_65535722_65536319_65536554_65536868_65537064_65537323_65537836_65538202_65538344_65541454_65541558_65549519_65549661_65557805_65558737_65559953
transcript_90075.known	chr17	-	4260	11	FSM	ENSG00000168646.14	ENST00000307078.10	4260	11	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_10	29.9634777687771	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGCCTCGTCTTTGAAT	-65561607	True	NA	-1	True	ATTAAA	-19	NA	65561648	65528562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_65530103_65533911_65534080_65535625_65535722_65536319_65536554_65536868_65537064_65537323_65537836_65538202_65538344_65541454_65541558_65549519_65549661_65557805_65558737_65561449
transcript_90083.nic	chr17	-	4277	10	NIC	ENSG00000168646.14	novel	4260	11	NA	NA	-68	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	31.6403399335581	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGCCTCGTCTTTGAAT	-65560323	False	1000	-1	True	ATTAAA	-19	NA	65560364	65528562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_65530103_65533911_65534080_65535625_65535722_65536319_65536554_65537323_65537836_65538202_65538344_65541454_65541558_65549519_65549661_65557805_65558737_65559953
transcript_90084.known	chr17	-	4060	10	FSM	ENSG00000168646.14	ENST00000618960.4	4060	10	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_9	31.6403399335581	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACACTGGCCTCGTCTTT	-65561606	True	NA	-5	True	ATTAAA	-15	NA	65561647	65528566	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_65530103_65533911_65534080_65535625_65535722_65536319_65536554_65537323_65537836_65538202_65538344_65541454_65541558_65549519_65549661_65557805_65558737_65561449
transcript_90090.known	chr17	-	3447	27	FSM	ENSG00000154240.17	ENST00000535342.7	3447	27	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_12	4.58725401610637	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTATTTCTACTTTTTAT	-66191449	True	NA	3	True	ATTAAA	-21	NA	66192133	65635536	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_65635975_65637123_65637189_65640963_65641066_65689128_65689219_65743067_65743218_65750661_65750725_65851803_65852035_65902151_65902335_65927581_65927690_65961462_65961599_66005689_66005770_66027500_66027561_66028312_66028406_66029122_66029253_66029868_66030024_66053735_66053880_66062962_66063082_66066777_66066878_66069914_66070002_66096250_66096329_66096584_66096633_66129745_66129824_66132669_66132764_66175043_66175217_66176829_66177021_66183193_66183308_66191996
transcript_90094.known	chr17	+	8964	17	FSM	ENSG00000154229.12	ENST00000413366.8	8964	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.085211401702	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGTAGTTGGCCTTAT	66300738	True	NA	9	True	AATAAA	-15	NA	66302612	66810743	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_66303025_66306095_66306128_66496200_66496284_66641354_66641467_66645382_66645512_66687110_66687268_66688301_66688437_66688950_66689048_66732687_66732826_66735488_66735663_66738763_66738856_66741658_66741722_66742621_66742761_66773986_66774068_66786866_66786975_66788838_66788980_66803872
transcript_90099.known	chr17	+	321	2	FSM	ENSG00000154229.12	ENST00000583775.1	321	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTAATTTTATTTTTTGCC	66302939	False	NA	NA	False	AAAAAG	-6	NA	66302956	66306348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_66303025_66306095
transcript_90100.known	chr17	+	10576	6	FSM	ENSG00000075429.9	ENST00000533854.6	10576	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	1.35646599662505	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCATCTCTCTTTCTCAC	66834791	True	NA	NA	False	AATAAA	-16	NA	66835116	66894751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_66835251_66877229_66877529_66878971_66879059_66880556_66880698_66884515_66884662_66884982
transcript_90104.known	chr17	-	6279	33	FSM	ENSG00000198265.12	ENST00000580168.5	6279	33	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_17	24.342285739018	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGTTAATTGTGCAACTA	-67240328	True	NA	NA	False	TTTAAA	-42	NA	67245183	67077971	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_67078587_67086828_67087082_67107168_67107686_67108491_67108727_67109115_67109687_67114323_67114404_67120404_67120613_67122969_67123161_67123962_67124015_67128650_67128856_67135969_67136199_67137930_67138115_67145742_67145891_67148568_67148715_67149866_67149986_67151045_67151225_67160260_67160366_67160896_67161077_67166477_67166609_67167462_67167797_67178658_67178927_67188318_67188617_67189588_67189697_67190156_67190356_67193966_67194043_67195418_67195471_67201128_67201186_67203318_67203444_67215898_67215936_67218594_67218823_67239432_67239490_67243783_67243840_67245147
transcript_90107.known	chr17	-	1872	14	FSM	ENSG00000198265.12	ENST00000417253.7	1872	14	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	18.9296423882425	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAGGCTATCTAGGGA	-67240332	True	NA	NA	False	AATATA	-3	NA	67245187	67167525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_67167797_67178658_67178927_67188318_67188617_67189588_67189697_67190156_67190356_67193966_67194043_67195418_67195471_67201128_67201186_67203318_67203444_67215898_67215936_67218594_67218823_67239432_67239490_67243783_67243840_67245147
transcript_90110.known	chr17	-	13817	33	FSM	ENSG00000198265.12	ENST00000358691.10	13817	33	0	0	0	0	multi-exon	TRUE	canonical	3	49	junction_5	21.7642733338377	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAGATGTGTTTATTAT	-67240341	True	NA	NA	False	AATAAA	-16	NA	67245196	67070443	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_67078587_67086828_67087082_67107168_67107686_67108491_67108727_67109115_67109687_67114323_67114404_67120404_67120613_67122969_67123161_67123962_67124015_67128650_67128856_67135969_67136199_67137930_67138115_67145742_67145891_67148568_67148715_67149866_67149986_67151045_67151225_67160260_67160363_67160896_67161077_67166477_67166609_67167462_67167797_67178658_67178927_67188318_67188617_67189588_67189697_67190156_67190356_67193966_67194043_67195418_67195471_67201128_67201186_67203318_67203444_67215898_67215936_67218594_67218823_67239432_67239490_67243783_67243840_67245147
transcript_90112.nnic	chr17	-	3631	12	NNC	ENSG00000197170.10	novel	4356	11	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	391.432820408001	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCTTTTCAGTTCTCAT	-67344944	True	NA	-1	True	AATAAA	-20	NA	67366637	67337915	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_67338608_67339392_67341053_67342185_67342264_67344605_67344781_67345744_67345858_67347115_67347251_67347335_67347486_67348549_67348655_67350228_67350337_67357302_67357432_67357518_67357579_67366411
transcript_90116.known	chr17	-	4356	11	FSM	ENSG00000197170.10	ENST00000356126.8	4356	11	0	0	0	0	multi-exon	FALSE	canonical	3	1236	junction_3	64.8617761088917	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCTTTTCAGTTCTCAT	-67344884	True	NA	-1	True	AATAAA	-20	NA	67366577	67337915	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_67341053_67342185_67342264_67344605_67344781_67345744_67345858_67347115_67347251_67347335_67347486_67348549_67348655_67350228_67350337_67357302_67357432_67357518_67357579_67366411
transcript_90123.nic	chr17	-	728	6	ISM	ENSG00000197170.10	ENST00000584289.5	1090	8	-35	1740	2	-1740	5prime_fragment	FALSE	canonical	3	1252	junction_3	66.2286946874238	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGAAAATACAGAGGTGA	-67344910	True	NA	NA	False	AAGAAA	-21	NA	67366603	67347351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_67347486_67348549_67348655_67350228_67350337_67357302_67357432_67357518_67357579_67366411
transcript_90124.nic	chr17	-	612	6	ISM	ENSG00000197170.10	ENST00000584289.5	1090	8	-23	1844	-4	-1844	5prime_fragment	FALSE	canonical	3	1252	junction_3	66.2286946874238	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCGAGTGGAATTTATTTT	-67344898	True	NA	NA	False	AAGAAA	-1	NA	67366591	67347455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_67347486_67348549_67348655_67350228_67350337_67357302_67357432_67357518_67357579_67366411
transcript_90128.known	chr17	+	6182	10	FSM	ENSG00000154217.16	ENST00000580974.5	6182	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	92.2433710689979	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCAAGCGTAGCTTCCTC	67377362	True	NA	8	True	AATAAA	-17	NA	67377458	67697256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_67378203_67532801_67532951_67552256_67552346_67553609_67553618_67578185_67578258_67632142_67632239_67669507_67669664_67675478_67675543_67687065_67687185_67692571
transcript_90132.known	chr17	+	6241	9	FSM	ENSG00000154217.16	ENST00000581322.6	6241	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	106.890057418826	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCAAGCGTAGCTTCCTC	67374329	True	NA	8	True	AATAAA	-17	NA	67377280	67697256	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_67378203_67532801_67532951_67552256_67552346_67553609_67553618_67578185_67578258_67632142_67632239_67669507_67669664_67675478_67675543_67692571
transcript_90135.nic	chr17	+	2042	9	NIC	ENSG00000154217.16	novel	6182	10	NA	NA	-25	-446	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	89.8560480713458	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTGTTGTTGTTGTTTT	67374304	True	NA	33	True	TATAAA	-23	NA	67377255	67692921	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_67378203_67532801_67532951_67552256_67552346_67578185_67578258_67632142_67632239_67669507_67669664_67675478_67675543_67687065_67687185_67692571
transcript_90145.known	chr17	+	2844	18	FSM	ENSG00000130935.10	ENST00000253247.9	2844	18	0	0	0	0	multi-exon	FALSE	canonical	3	498	junction_10	65.1180987284405	333	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTTAATCTCTCAGTA	67706561	True	NA	3	True	AATAAA	-15	NA	67717935	67744531	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_67718089_67719673_67719788_67719905_67719963_67721377_67721527_67722579_67722638_67724048_67724194_67726459_67726649_67734362_67734440_67735899_67736024_67736665_67736755_67737070_67737146_67737507_67737693_67737846_67737973_67738121_67738356_67738931_67739011_67739515_67739609_67743478_67743587_67743742
transcript_90183.known	chr17	-	1082	3	FSM	ENSG00000186665.10	ENST00000449250.3	1082	3	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_2	22	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATAAAATAAAAAATAGT	-67991524	True	NA	NA	False	ATTAAA	-5	NA	67993545	67991335	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_67992104_67993043_67993236_67993423
transcript_90184.known	chr17	-	1535	3	FSM	ENSG00000186665.10	ENST00000334461.7	1535	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	53.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAGCAATAAATCTTGAC	-67993639	False	NA	-37	True	NA	NA	NA	67993649	67991129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_67992104_67992900_67993236_67993423
transcript_90188.nic	chr17	-	1593	2	ISM	ENSG00000186665.10	ENST00000449250.3	1082	3	-86	-237	18	0	intron_retention	FALSE	canonical	3	200	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGATGCACCTGTTTGT	-67993621	False	NA	-6	True	AATAAA	-19	NA	67993631	67991098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_67992104_67993043
transcript_90190.known	chr17	-	1654	2	FSM	ENSG00000186665.10	ENST00000536693.1	1654	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCTTGGATGCACCTGTT	-67991531	True	NA	-9	True	AATAAA	-16	NA	67993552	67991101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_67992104_67992900
transcript_90191.nnic	chr17	-	1170	2	NIC	ENSG00000186665.10	novel	1535	3	NA	NA	-41	-2	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATCTTGGATGCACCTG	-67991572	True	NA	-11	True	AATAAA	-14	NA	67993593	67991103	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_67992104_67993423
transcript_90202.known	chr17	+	1977	11	FSM	ENSG00000182481.10	ENST00000330459.8	1977	11	0	0	0	0	multi-exon	FALSE	canonical	3	4225	junction_6	282.770596066847	4134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCCTATGTGTTGCTTT	67979121	True	NA	19	True	AATAAA	-30	NA	68035734	68046854	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68035841_68037109_68037208_68037357_68037496_68040677_68040767_68042084_68042354_68042904_68043000_68043099_68043364_68043837_68044072_68044320_68044504_68045771_68045922_68046503
transcript_90211.known	chr17	+	2315	10	FSM	ENSG00000182481.10	ENST00000678388.1	2315	10	0	0	0	0	multi-exon	FALSE	canonical	3	4225	junction_6	237.575614993429	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTAGATCATGTAGCTG	67979099	True	NA	-24	True	GGGGCT	-14	NA	68035712	68046588	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68035841_68037109_68037208_68037357_68037496_68040677_68040767_68042084_68042354_68042904_68043000_68043099_68043364_68043837_68044072_68044320_68044504_68045771
transcript_90213.known	chr17	+	2741	10	FSM	ENSG00000182481.10	ENST00000676902.1	2741	10	0	0	0	0	multi-exon	FALSE	canonical	3	4225	junction_6	261.270400585719	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTAATCCCAGCTACTCA	67979116	True	NA	NA	False	AGTAAA	-43	NA	68035729	68047364	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68035841_68037109_68037208_68037357_68037496_68040677_68040767_68042084_68042354_68042904_68043000_68043099_68043364_68043837_68044504_68045771_68045922_68046503
transcript_90216.known	chr17	+	2082	10	FSM	ENSG00000182481.10	ENST00000679346.1	2082	10	0	0	0	0	multi-exon	FALSE	canonical	3	4248	junction_4	279.890631197435	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCCTATGTGTTGCTTT	67979116	True	NA	19	True	AATAAA	-30	NA	68035729	68046854	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68035841_68037109_68037208_68037357_68037496_68040677_68040767_68042084_68042354_68042904_68043364_68043837_68044072_68044320_68044504_68045771_68045922_68046503
transcript_90217.known	chr17	+	3043	10	FSM	ENSG00000182481.10	ENST00000677419.1	3043	10	0	0	0	0	multi-exon	FALSE	canonical	3	4225	junction_5	293.133180872441	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTAATCCCAGCTACTCA	67979116	True	NA	NA	False	AGTAAA	-43	NA	68035729	68047364	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68035841_68037109_68037208_68037357_68037496_68040677_68040767_68042084_68043000_68043099_68043364_68043837_68044072_68044320_68044504_68045771_68045922_68046503
transcript_90221.known	chr17	+	1963	9	FSM	ENSG00000182481.10	ENST00000677918.1	1963	9	0	0	0	0	multi-exon	FALSE	canonical	3	4225	junction_6	242.801230433456	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATAATCCCAGCTACTCA	67979099	True	NA	NA	False	NA	NA	NA	68035712	68044968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68035841_68037109_68037208_68037357_68037496_68040677_68040767_68042084_68042354_68042904_68043000_68043099_68043364_68043837_68044072_68044320
transcript_90228.known	chr17	+	2303	8	FSM	ENSG00000182481.10	ENST00000677695.1	2303	8	0	0	0	0	multi-exon	FALSE	canonical	3	4225	junction_6	188.068376623276	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTGAAACTGTCTTAAAAAA	67979116	True	NA	NA	False	NA	NA	NA	68035729	68045076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68035841_68037109_68037208_68037357_68037496_68040677_68040767_68042084_68042354_68042904_68043000_68043099_68043364_68043837
transcript_90240.nnic	chr17	+	945	5	FSM	ENSG00000237854.4	ENST00000692407.1	1357	5	-228	640	-224	-640	multi-exon	TRUE	canonical	3	18	junction_1	3.35410196624968	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAGAACAATTAAAAAAA	68101611	False	NA	NA	False	AAAAAG	-7	NA	68101649	68125908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68101960_68102942_68103059_68114421_68114526_68125389_68125481_68125584
transcript_90244.known	chr17	+	1378	8	FSM	ENSG00000196704.14	ENST00000392720.6	1378	8	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	256.145048193959	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTTCTCATCTTACTGG	68243052	True	NA	19	True	AATAAA	-16	NA	68248042	68257154	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68248087_68248639_68248706_68250187_68250471_68250793_68250968_68251049_68251179_68254403_68254568_68255699_68255877_68256813
transcript_90246.known	chr17	+	1339	8	FSM	ENSG00000196704.14	ENST00000580753.5	1339	8	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	255.799267602787	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCTAGAAACTCTTTATC	68243044	True	NA	4	True	AATAAA	-1	NA	68248034	68257139	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68248059_68248643_68248706_68250187_68250471_68250793_68250968_68251049_68251179_68254403_68254568_68255699_68255877_68256813
transcript_90251.nic	chr17	+	1373	8	NIC	ENSG00000196704.14	novel	1498	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	298.749707539777	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCTTCTCATCTTACTG	68243080	True	NA	18	True	AATAAA	-15	NA	68248070	68257153	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_68248111_68248639_68248706_68250187_68250471_68250793_68250968_68251049_68251179_68254403_68254568_68255699_68255877_68256813
transcript_90252.known	chr17	+	1498	8	FSM	ENSG00000196704.14	ENST00000612294.4	1498	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	316.7969155694	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTACTGGCCTGGTCTGT	68243013	True	NA	29	True	AATAAA	-26	NA	68248003	68257164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68248158_68248639_68248706_68250187_68250471_68250793_68250968_68251049_68251179_68254403_68254568_68255699_68255877_68256813
transcript_90255.known	chr17	+	1932	7	FSM	ENSG00000196704.14	ENST00000359904.8	1932	7	0	0	0	0	multi-exon	FALSE	canonical	3	847	junction_2	42.4368812342388	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTCTCATCTTACTGGC	68243052	True	NA	20	True	AATAAA	-17	NA	68248042	68257155	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68248706_68250187_68250471_68250793_68250968_68251049_68251179_68254403_68254568_68255699_68255877_68256813
transcript_90259.known	chr17	+	1722	6	FSM	ENSG00000196704.14	ENST00000359783.8	1722	6	0	0	0	0	multi-exon	FALSE	canonical	2	48	junction_2	350.375798250964	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGAATAATAAAAACTCTAG	68243060	True	NA	-8	True	AATGAA	-8	NA	68248050	68257127	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68248706_68250187_68250471_68251049_68251179_68254403_68254568_68255699_68255877_68256813
transcript_90262.known	chr17	+	2005	1	FSM	ENSG00000274712.2	ENST00000614046.1	2005	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTGAGGAAAAAGGACCC	68205111	True	NA	9	True	AATAAA	-16	NA	68205488	68207493	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68205500_68207500
transcript_90270.known	chr17	+	4642	12	FSM	ENSG00000141337.13	ENST00000448504.6	4642	12	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_1	9.23432332511307	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	68259088	True	NA	NA	False	NA	NA	NA	68259181	68422731	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68259427_68306942_68307712_68343603_68343792_68347124_68347173_68351574_68351687_68356666_68356805_68368547_68368745_68370443_68370525_68385063_68385173_68395072_68395194_68401359_68401451_68420188
transcript_90272.known	chr17	+	2554	12	FSM	ENSG00000141337.13	ENST00000621439.5	2554	12	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_10	6.47053078155427	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGACACAGAGCAGACATT	68290819	True	NA	NA	False	AATAAA	-29	NA	68291494	68420814	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68291569_68306942_68307712_68343603_68343792_68347124_68347173_68351574_68351687_68356666_68356805_68368547_68368745_68370443_68370525_68385063_68385173_68395072_68395194_68401359_68401451_68420188
transcript_90279.known	chr17	-	1886	13	FSM	ENSG00000070540.13	ENST00000589316.5	1886	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	46.7608424741138	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACACTAATAATAAAATCAT	-68456222	True	NA	-44	True	AATAAA	-29	NA	68457499	68421309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_68421821_68426074_68426176_68427134_68427254_68428828_68428937_68429995_68430161_68433463_68433576_68434555_68434627_68435619_68435713_68436381_68436480_68444492_68444590_68450727_68450898_68452909_68452993_68457341
transcript_90282.known	chr17	-	1804	12	FSM	ENSG00000070540.13	ENST00000589459.5	1804	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	60.0747468293589	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACACTAATAATAAAATCATG	-68456222	True	NA	-43	True	AATAAA	-30	NA	68457499	68421308	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_68421821_68426074_68426176_68427134_68427254_68428828_68428937_68429995_68430161_68433463_68433576_68434555_68434627_68435619_68435713_68436381_68436480_68444492_68444590_68450727_68450898_68457341
transcript_90285.nic	chr17	-	2127	12	ISM	ENSG00000070540.13	ENST00000589316.5	1886	13	-48	4061	-34	555	5prime_fragment	FALSE	canonical	0	0	junction_4	48.8392539590105	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCGGGTGTGGTGTCAC	-68456270	True	NA	NA	False	AAAAAG	-12	NA	68457547	68425370	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_68426176_68427134_68427254_68428828_68428937_68429995_68430161_68433463_68433576_68434555_68434627_68435619_68435713_68436381_68436480_68444492_68444590_68450727_68450898_68452909_68452993_68457341
transcript_90299.known	chr17	+	3576	11	FSM	ENSG00000108946.16	ENST00000358598.6	3576	11	0	0	0	0	multi-exon	TRUE	canonical	3	125	junction_1	470.922329052255	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAAATGAATCAGTTTT	68509958	True	NA	NA	False	AATAAA	-21	NA	68512031	68532762	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68512143_68515393_68515577_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68530276
transcript_90303.known	chr17	+	4253	11	FSM	ENSG00000108946.16	ENST00000589228.6	4253	11	0	0	0	0	multi-exon	FALSE	canonical	3	1318	junction_10	163.3	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTGGGTTGACAGTCC	68495359	True	NA	NA	False	AATAAA	-17	NA	68512429	68533431	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68512549_68515393_68515577_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68530276
transcript_90307.nic	chr17	+	1373	11	NIC	ENSG00000108946.16	novel	1209	10	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	193	junction_10	449.667254756225	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACTTCCTAGTAGCCTTT	68510317	False	NA	18	True	AATAAA	-25	NA	68512390	68551319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_68512549_68515393_68515577_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68551083
transcript_90308.known	chr17	+	4327	11	FSM	ENSG00000108946.16	ENST00000392711.5	4327	11	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	496.040159664517	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAAATTTCTCTGGGTT	68510305	False	NA	NA	False	AATAAA	-9	NA	68512378	68533423	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68512580_68515393_68515577_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68530276
transcript_90315.known	chr17	-	4688	11	FSM	ENSG00000108950.12	ENST00000592554.2	4688	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	2.94788059459674	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTTTCAAGTTACTACT	-68601031	True	NA	NA	False	AATAAA	-18	NA	68601367	68535115	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_68537742_68539336_68539397_68539884_68539967_68540848_68540959_68541984_68542166_68542693_68542810_68543628_68543722_68551872_68551952_68554776_68554828_68555558_68555744_68600262
transcript_90321.nic	chr17	+	503	3	ISM	ENSG00000108946.16	ENST00000585460.1	680	5	-39	1213	12	143	5prime_fragment	FALSE	canonical	3	1390	junction_1	218.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAGAAAGGTAGTTTTGAT	68510317	False	NA	NA	False	NA	NA	NA	68512390	68522917	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_68512549_68515393_68515577_68522755
transcript_90324.known	chr17	+	3551	11	FSM	ENSG00000108946.16	ENST00000392710.8	3551	11	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_2	483.640320899736	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTCTTAAATGAATCAGT	68495379	True	NA	NA	False	AATAAA	-18	NA	68512449	68532759	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68512549_68515393_68515567_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68530276
transcript_90325.known	chr17	+	1209	10	FSM	ENSG00000108946.16	ENST00000588188.6	1209	10	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_9	472.948904921733	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACTTCCTAGTAGCCTTT	68515330	True	NA	18	True	AATAAA	-25	NA	68515399	68551319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_68515577_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68551083
transcript_90329.known	chr17	+	13405	12	FSM	ENSG00000108984.15	ENST00000590474.7	13405	12	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	14.5044877637666	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCTGTACATTAATTG	69411876	True	NA	19	True	AATAAA	-20	NA	69414696	69553865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_69415001_69505779_69505847_69516854_69516904_69517499_69517614_69519312_69519433_69520269_69520387_69521048_69521101_69523513_69523642_69524900_69524979_69526569_69526710_69536114_69536161_69541675
transcript_90336.known	chr17	+	3931	3	FSM	ENSG00000125398.8	ENST00000245479.3	3931	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTGGCCCTGTGGATTT	72120556	True	NA	65	True	AATAAA	-19	NA	72121019	72126416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_72121823_72122718_72122973_72123542
transcript_90338.known	chr17	-	2282	4	FSM	ENSG00000227036.9	ENST00000650131.3	2292	4	0	10	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.88561808316413	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTTGTATGACCATTTA	-72592587	True	NA	NA	False	ATTAAA	-22	NA	72592829	72403321	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_72404817_72428235_72428299_72431127_72431225_72592202
transcript_90339.known	chr17	-	2208	3	FSM	ENSG00000227036.9	ENST00000649793.2	2208	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTTGTATGACCATTTA	NA	False	NA	NA	False	ATTAAA	-22	NA	72592852	72403321	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_72404817_72428235_72428299_72592202
transcript_90340.known	chr17	-	1455	2	FSM	ENSG00000227036.9	ENST00000650423.1	1455	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAAGAAAGGGAGT	-72592450	False	NA	NA	False	NA	NA	NA	72592692	72427333	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_72428299_72592202
transcript_90341.known	chr17	-	2522	5	FSM	ENSG00000227036.9	ENST00000648623.2	2522	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTTGTATGACCATTTA	-72592562	True	NA	NA	False	ATTAAA	-22	NA	72592804	72403321	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_72404817_72420699_72420965_72428235_72428299_72431127_72431225_72592202
transcript_90344.nic	chr17	-	2890	10	NIC	ENSG00000133195.12	novel	2752	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	26.2170428029809	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACCTGTGTTACGTTCAG	-73090979	True	NA	-18	True	AATAAA	-16	NA	73092710	72645949	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_72647663_72648802_72648962_72649169_72649269_72736649_72736720_72849633_72849805_72947730_72947876_73031555_73031715_73084807_73084847_73088656_73088776_73092494
transcript_90345.known	chr17	-	2752	10	FSM	ENSG00000133195.12	ENST00000542342.6	2752	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	22.000561160071	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACCTGTGTTACGTTCAG	-73090957	True	NA	-18	True	AATAAA	-16	NA	73092688	72645949	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_72647663_72648802_72648962_72649169_72649269_72736649_72736720_72849633_72849805_72947730_72947876_73031555_73031715_73084807_73084847_73088656_73088776_73092610
transcript_90347.known	chr17	-	2737	10	FSM	ENSG00000133195.12	ENST00000255559.8	2732	10	-5	0	-5	0	multi-exon	FALSE	canonical	3	33	junction_5	13.3287028996694	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTACGTTCAGT	-73090962	True	NA	-17	True	AATAAA	-17	NA	73092693	72645948	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_72647663_72648802_72648962_72649169_72649269_72736649_72736720_72849633_72849805_72947751_72947876_73031555_73031715_73084807_73084847_73088656_73088776_73092610
transcript_90353.known	chr17	-	1004	7	FSM	ENSG00000133195.12	ENST00000579732.5	1004	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	24.7835070605881	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTTTTTGTGTCTGGT	-73090950	True	NA	-3	True	TTTAAA	-16	NA	73092681	72837799	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_72838121_72849633_72849805_72947751_72947876_73031555_73031715_73084807_73084847_73088656_73088776_73092610
transcript_90354.known	chr17	+	3014	14	FSM	ENSG00000166685.13	ENST00000299886.9	3014	14	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_10	13.1008830272877	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCCTCTGCTCATCTGAT	73191038	True	NA	15	True	AATAAA	-25	NA	73193054	73208507	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_73193385_73196506_73196752_73196899_73197082_73197225_73197397_73199864_73200022_73200565_73200777_73201108_73201901_73202999_73203147_73203631_73203794_73205552_73205681_73206153_73206263_73206707_73206818_73207180_73207257_73208313
transcript_9036.nic	chr1	+	716	2	FSM	ENSG00000232022.8	ENST00000692135.1	718	2	-4	6	-4	-6	multi-exon	FALSE	canonical	3	29	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGGCCTCATGATCTCTGG	46442365	True	NA	1	True	AATAAA	-16	NA	46442825	46445702	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_46443038_46445198
transcript_9037.known	chr1	+	398	2	FSM	ENSG00000232022.8	ENST00000635606.2	492	2	94	0	62	0	multi-exon	FALSE	canonical	3	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGGGGTAATTTGTTAT	46442463	True	NA	7	True	AATAAA	-21	NA	46442923	46482493	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_46443038_46482209
transcript_90371.known	chr17	+	3369	16	NNC	ENSG00000166685.13	novel	3014	14	NA	NA	-423	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	40.816445487355	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGGTGCCTCTGCTCATC	NA	False	NA	11	True	AATAAA	-21	NA	73192631	73208503	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_73192832_73192933_73193385_73196506_73196752_73196899_73197082_73197225_73197397_73199864_73200022_73200565_73200777_73201108_73201901_73202999_73203147_73203631_73203794_73205552_73205681_73206153_73206263_73206707_73206818_73207180_73207257_73207701_73207740_73208313
transcript_90373.known	chr17	+	3618	6	FSM	ENSG00000141219.16	ENST00000535032.7	3618	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	45.4110118803799	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTCCCCTGAGCTGATTA	73231671	True	NA	15	True	AATAAA	-22	NA	73232432	73248959	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_73232490_73233219_73233326_73235475_73236996_73242243_73242352_73242895_73243004_73247240
transcript_90375.known	chr17	+	2075	6	FSM	ENSG00000141219.16	ENST00000426147.6	2075	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_5	61.9645059691433	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGATACAGGAAGTAAACG	73229486	True	NA	NA	False	AATAAA	-26	NA	73232661	73245344	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_73232718_73233219_73233326_73235475_73236996_73242243_73242352_73242895_73243004_73245167
transcript_90376.known	chr17	+	3645	6	FSM	ENSG00000141219.16	ENST00000359042.6	3645	6	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	28.5418990258182	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATAAAAAGTACTCCC	73231860	False	NA	3	True	AATAAA	-10	NA	73232621	73248947	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_73232718_73233219_73233326_73235475_73236996_73242243_73242352_73242895_73243004_73247240
transcript_90378.known	chr17	+	2049	5	FSM	ENSG00000141219.16	ENST00000577615.5	2049	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	59.8054136345532	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGTGCTGAAACATAATGAA	73231703	False	NA	NA	False	AATAAA	-23	NA	73232464	73247530	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_73232490_73233219_73233326_73235475_73236996_73242895_73243004_73247240
transcript_90380.known	chr17	+	3449	5	FSM	ENSG00000141219.16	ENST00000268942.12	3449	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	51.8766566000547	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCAGACTCTTTTATACT	73231875	False	NA	17	True	AATAAA	-13	NA	73232636	73248874	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_73232718_73233219_73233326_73235475_73236996_73242895_73243004_73247240
transcript_90386.known	chr17	-	2865	4	FSM	ENSG00000133193.13	ENST00000405159.8	2876	4	23	-12	-4	0	multi-exon	FALSE	canonical	3	89	junction_2	156.942310703293	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTTAATCAGTTATTTAA	NA	False	NA	1	True	ATTAAA	-28	NA	73232371	73207352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_73209769_73212677_73212741_73227164_73227265_73232085
transcript_9039.known	chr1	+	5050	6	FSM	ENSG00000197587.11	ENST00000360032.4	5050	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.07245829914744	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTCAGTCCATGTTCATT	46489463	True	NA	9	True	AATAAA	-19	NA	46489835	46516216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_46489878_46490643_46490784_46506998_46507165_46510475_46510655_46510934_46511284_46512042
transcript_90390.known	chr17	+	2163	5	FSM	ENSG00000141219.16	ENST00000255557.8	2163	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	66.3871222452066	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAATGATACAGGAAGT	NA	False	NA	NA	False	AATAAA	-21	NA	73232232	73245339	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_73232490_73233219_73233326_73235475_73236996_73242895_73243004_73245167
transcript_90396.known	chr17	-	2798	3	FSM	ENSG00000133193.13	ENST00000403627.7	2798	3	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_1	18.5	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTTAATCAGTTATTTAA	NA	False	NA	1	True	ATTAAA	-28	NA	73232367	73207352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_73209769_73227164_73227265_73232085
transcript_90399.known	chr17	+	7685	2	FSM	ENSG00000180616.9	ENST00000357585.4	7685	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTTGCGTATGTCTT	73164564	True	NA	NA	False	ATTAAA	-21	NA	73165009	73176633	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_73165289_73169227
transcript_90403.known	chr17	-	512	2	FSM	ENSG00000133193.13	ENST00000581110.1	512	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAGCCTACAGCACCGAG	NA	False	NA	NA	False	NA	NA	NA	73232394	73209565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_73209769_73232085
transcript_90405.known	chr17	-	580	3	FSM	ENSG00000179604.10	ENST00000579611.1	580	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAACGCAGTCTCCTGTC	-73311227	True	NA	NA	False	NA	NA	NA	73312001	73286281	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_73286613_73286713_73286854_73311892
transcript_90406.known	chr17	-	1022	2	FSM	ENSG00000179604.10	ENST00000580315.1	1022	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGAGAAGGGCACCAGTAAG	-73310634	False	NA	NA	False	NA	NA	NA	73311408	73286118	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_73286613_73310880
transcript_90407.known	chr17	-	3098	2	FSM	ENSG00000179604.10	ENST00000335793.4	3098	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGGTGTCTGTCTCTGC	-73311227	True	NA	-2	True	ATTAAA	-18	NA	73312001	73283623	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_73286613_73311892
transcript_9041.nnic	chr1	+	2920	5	NIC	ENSG00000197587.11	novel	5050	6	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	2.95803989154981	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAATAAA	46489449	True	NA	NA	False	NA	NA	NA	46489821	46514212	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_46489878_46506998_46507165_46510475_46510655_46510934_46511284_46512042
transcript_90411.known	chr17	+	1145	5	FSM	ENSG00000172809.13	ENST00000311111.11	1145	5	0	0	0	0	multi-exon	FALSE	canonical	3	11154	junction_1	2339.24649994395	1177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTAGTGTTTTTTGTTTTTT	74128515	True	NA	11	True	CATAAA	-19	NA	74203677	74210655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_74203746_74203917_74203959_74204129_74204191_74209186_74209310_74209803
transcript_90412.known	chr17	+	431	5	FSM	ENSG00000172809.13	ENST00000439590.6	431	5	0	0	0	0	multi-exon	FALSE	canonical	3	870	junction_1	6336.68514978455	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTTTCGTCTTTGCGGA	74203560	False	NA	15	True	ATTAAA	-17	NA	74203581	74209880	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_74203711_74203917_74203959_74204129_74204191_74209186_74209310_74209803
transcript_90415.known	chr17	+	344	5	FSM	ENSG00000172809.13	ENST00000584577.5	344	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	6671.64312594731	1161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGTCTTTCGTCTTTGCG	74128530	True	NA	13	True	ATTAAA	-15	NA	74203692	74209878	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_74203746_74203917_74203959_74204129_74204191_74209186_74209310_74209812
transcript_90416.known	chr17	+	576	3	FSM	ENSG00000172809.13	ENST00000529123.2	576	3	0	0	0	0	multi-exon	FALSE	canonical	3	11154	junction_1	2735	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATCGAGCACGGCACACT	74128512	True	NA	NA	False	AATAAA	-22	NA	74203674	74204593	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_74203746_74203917_74203959_74204129
transcript_90417.known	chr17	+	532	4	FSM	ENSG00000172809.13	ENST00000533498.1	532	4	0	0	0	0	multi-exon	FALSE	canonical	3	12347	junction_3	1894.3465012153	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGGATGGGAAAGGGAAAAAT	74128541	True	NA	31	True	ATTAAA	-33	NA	74203703	74209896	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_74203959_74204129_74204191_74209186_74209310_74209803
transcript_90418.known	chr17	+	3433	14	FSM	ENSG00000141540.11	ENST00000269346.9	3433	14	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	8.86986788024589	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCGTTCCGTTTCTGACT	74213158	True	NA	NA	False	AATAAA	-16	NA	74213570	74262020	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_74213717_74222484_74222658_74230887_74231000_74237293_74237515_74243373_74243470_74243976_74244050_74249010_74249081_74249343_74249400_74249935_74250029_74250264_74250358_74252233_74252377_74253080_74253267_74253754_74253834_74260128
transcript_90425.known	chr17	+	3629	20	FSM	ENSG00000196169.15	ENST00000389916.5	3629	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.33148533059721	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTGTGTTGGAAATTTGA	74326185	True	NA	18	True	AATAAA	-19	NA	74326225	74355820	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_74326389_74328424_74328506_74341875_74341987_74342629_74342718_74343023_74343161_74344222_74344349_74344760_74344956_74346377_74346525_74347776_74347900_74349183_74349350_74350400_74350576_74350706_74350906_74351866_74352138_74352218_74352341_74352820_74352955_74353195_74353302_74353493_74353582_74354161_74354560_74354781_74354942_74355181
transcript_90427.known	chr17	-	1727	3	FSM	ENSG00000204347.4	ENST00000375366.4	1727	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	4.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGATGATTGAACCACTCAG	-74361630	True	NA	-3	True	AATAAA	-21	NA	74361868	74356415	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_74357732_74359968_74360246_74361734
transcript_90431.known	chr17	+	1529	5	FSM	ENSG00000170412.18	ENST00000392628.7	1529	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	32.1276749859058	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCCGTGAAGCCCTGAGT	74431583	True	NA	NA	False	NA	NA	NA	74432115	74449509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_74432142_74439744_74440828_74443817_74443913_74446848_74446999_74449334
transcript_90433.known	chr17	+	1813	4	FSM	ENSG00000170412.18	ENST00000392627.7	1813	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	24.5266295188629	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGCTCTGGGATTGTGG	74431555	True	NA	13	True	AATAAA	-20	NA	74432087	74447429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_74432142_74439744_74440828_74443817_74443913_74446848
transcript_90435.nic	chr17	+	2169	4	NIC	ENSG00000170412.18	novel	1813	4	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	20.2868320729373	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGCTCTGGGATTGTGG	74431581	True	NA	13	True	AATAAA	-20	NA	74432113	74447429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_74432524_74439744_74440828_74443817_74443913_74446848
transcript_90437.known	chr17	+	393	3	FSM	ENSG00000170412.18	ENST00000582873.1	393	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	37	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGGGACTCTCCAGGCTC	74443065	False	NA	NA	False	NA	NA	NA	74443076	74447088	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_74443135_74443817_74443913_74446848
transcript_90438.known	chr17	+	584	2	FSM	ENSG00000170412.18	ENST00000582473.2	584	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGTGGCTGGGGCGGGCA	74431600	True	NA	NA	False	NA	NA	NA	74432132	74439937	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_74432524_74439744
transcript_90439.known	chr17	+	1638	7	FSM	ENSG00000167851.15	ENST00000360141.8	1638	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3.77123616632825	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGCTATGTGTCTGCAA	74466542	False	NA	7	True	AGTAAA	-16	NA	74466633	74484794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_74466744_74473535_74473875_74474531_74474686_74477435_74477531_74481288_74481327_74481725_74481834_74484000
transcript_9044.known	chr1	+	2882	4	FSM	ENSG00000197587.11	ENST00000371956.8	2882	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	3.85861230093008	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	46506995	46514212	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_46507165_46510460_46510655_46510934_46511284_46512042
transcript_90440.known	chr17	+	1785	7	FSM	ENSG00000167851.15	ENST00000648095.1	1785	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3.77123616632825	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGCTATGTGTCTGCAA	74466307	True	NA	7	True	AGTAAA	-16	NA	74466398	74484794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_74466656_74473535_74473875_74474531_74474686_74477435_74477531_74481288_74481327_74481725_74481834_74484000
transcript_90443.known	chr17	+	631	6	FSM	ENSG00000167851.15	ENST00000310828.9	631	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.19523539268061	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTCCAGGGACAGCTCC	74466583	False	NA	NA	False	NA	NA	NA	74466674	74484167	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_74466744_74474531_74474686_74477435_74477531_74481288_74481327_74481725_74481834_74484000
transcript_90446.known	chr17	+	1163	5	FSM	ENSG00000167851.15	ENST00000392625.7	1163	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.30116263352131	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGCCTGCTATGTGTCT	74466566	False	NA	3	True	AGTAAA	-12	NA	74466657	74484790	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_74466744_74474531_74474686_74477435_74477531_74481288_74481327_74484000
transcript_90449.known	chr17	+	2613	9	FSM	ENSG00000172794.20	ENST00000392613.10	2613	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	5.87367006223537	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTGTCCACTGTTTCTT	74736873	True	NA	9	True	ATTAAA	-21	NA	74737255	74747335	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_74737366_74740767_74740879_74742253_74742296_74743128_74743196_74743287_74743341_74744307_74744374_74744872_74744930_74745007_74745085_74745305
transcript_90450.known	chr17	+	2858	8	FSM	ENSG00000172794.20	ENST00000392610.5	2858	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	5.87280136888413	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTGTCCACTGTTTCTT	74736849	True	NA	9	True	ATTAAA	-21	NA	74737231	74747335	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_74737366_74740767_74740879_74742253_74742296_74743128_74743196_74743287_74743341_74744307_74744374_74744872_74744930_74745007
transcript_90452.known	chr17	+	2528	8	FSM	ENSG00000172794.20	ENST00000392612.7	2528	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12.82694867242	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTGTCCACTGTTTCTT	74736847	True	NA	9	True	ATTAAA	-21	NA	74737229	74747335	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_74737366_74742253_74742296_74743128_74743196_74743287_74743341_74744307_74744374_74744872_74744930_74745007_74745085_74745305
transcript_90457.known	chr17	+	1993	6	FSM	ENSG00000109062.12	ENST00000262613.10	1993	6	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_1	15.107613974417	1679	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCAGCCTCCGTGTGTT	74740932	True	NA	9	True	NA	NA	NA	74748627	74769353	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_74749288_74762011_74762174_74763366_74763521_74766935_74766977_74768146_74768237_74768467
transcript_90465.known	chr17	+	2195	3	FSM	ENSG00000172794.20	ENST00000488977.1	2195	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	2	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCCTGTCCACTGTTTCT	74744819	True	NA	8	True	ATTAAA	-20	NA	74744840	74747334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_74744930_74745007_74745085_74745305
transcript_90472.known	chr17	-	583	7	FSM	ENSG00000109065.12	ENST00000583476.5	583	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	107.008826219564	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAGAGAAGCCTTACAGA	-74773187	True	NA	NA	False	NA	NA	NA	74776337	74771767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_74771859_74771959_74771978_74772217_74772278_74772895_74773040_74773575_74773689_74775621_74775708_74776266
transcript_90477.known	chr17	-	1011	7	FSM	ENSG00000109065.12	ENST00000581136.5	1011	7	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	95.0327428953949	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCCTTTCTCCTTAGAG	-74773174	True	NA	NA	False	NA	NA	NA	74776324	74771388	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_74771859_74771959_74772040_74772217_74772278_74772895_74773040_74773575_74773689_74775621_74775708_74776266
transcript_90478.known	chr17	-	839	7	FSM	ENSG00000109065.12	ENST00000578822.5	839	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	104.963088750284	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCAGGGTGTTGGGCCC	-74773148	True	NA	NA	False	NA	NA	NA	74776298	74771694	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_74771859_74771959_74772055_74772217_74772278_74772895_74773040_74773575_74773689_74775621_74775853_74776266
transcript_90484.known	chr17	-	1103	7	FSM	ENSG00000109065.12	ENST00000584022.5	1103	7	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_2	127.163936187375	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGTGTTGGGCCCATAC	-74773181	True	NA	NA	False	NA	NA	NA	74776331	74771690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_74771859_74771959_74772396_74772482_74772577_74772895_74773040_74773575_74773686_74775621_74775708_74776266
transcript_90495.known	chr17	-	1993	6	FSM	ENSG00000109065.12	ENST00000583834.5	1993	6	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_4	16.9587735405601	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGCCTCAGTATAAAACAAA	-74773173	True	NA	-52	True	NA	NA	NA	74776323	74770580	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_74771859_74771959_74772278_74772895_74773040_74773575_74773686_74775621_74775708_74776266
transcript_90500.nic	chr17	-	2226	6	NIC	ENSG00000109065.12	novel	1103	7	NA	NA	-19	0	intron_retention	FALSE	canonical	3	46	junction_2	92.0738833763408	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTCGTACCATGTGTAC	NA	False	NA	0	True	TATAAA	-38	NA	74776386	74770528	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_74771859_74771959_74772396_74772895_74773040_74773575_74773686_74775621_74775708_74776266
transcript_90506.known	chr17	-	573	6	FSM	ENSG00000109065.12	ENST00000582524.5	573	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	97.3188573710152	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAAGCCTTACAGAGATG	NA	False	NA	NA	False	NA	NA	NA	74776365	74771763	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_74771835_74772217_74772278_74772895_74773040_74773575_74773689_74775621_74775708_74776266
transcript_90515.nic	chr17	-	2726	5	NIC	ENSG00000109065.12	novel	1993	6	NA	NA	-19	0	intron_retention	FALSE	canonical	3	246	junction_3	18.952242611364	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTCGTACCATGTGTAC	NA	False	NA	0	True	TATAAA	-38	NA	74776386	74770528	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_74771859_74771959_74773040_74773575_74773686_74775621_74775708_74776266
transcript_90518.nic	chr17	-	3262	4	NIC	ENSG00000109065.12	novel	1993	6	NA	NA	-19	0	intron_retention	FALSE	canonical	3	246	junction_2	15.1070255914995	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTCGTACCATGTGTAC	NA	False	NA	0	True	TATAAA	-38	NA	74776386	74770528	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_74771859_74771959_74773686_74775621_74775708_74776266
transcript_90519.known	chr17	-	565	3	FSM	ENSG00000109065.12	ENST00000582993.5	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	80.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTCATGTCCCTCACCAC	NA	False	NA	NA	False	GGGGCT	-23	NA	74776367	74773310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_74773689_74775621_74775708_74776266
transcript_9052.known	chr1	-	2686	13	FSM	ENSG00000079277.22	ENST00000650508.1	2686	13	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	38.1454635427188	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGTGGTCCTTTTTTTT	-46602510	True	NA	-1	True	AATAAA	-23	NA	46604294	46557407	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_46558801_46560233_46560278_46561477_46561643_46562648_46562844_46565040_46565137_46568442_46568499_46572062_46572168_46574946_46575021_46576574_46576655_46580529_46580628_46583227_46583330_46594112_46594281_46604184
transcript_90520.nnic	chr17	+	2338	11	NNC	ENSG00000109066.14	novel	4703	10	NA	NA	-28	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	38.4546486136592	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACCTGTTTCCCACATCA	74773972	True	NA	17	True	AATAAA	-11	NA	74776470	74839749	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_74776578_74777263_74777376_74785481_74785604_74788788_74788871_74790199_74790297_74790955_74791037_74795011_74795112_74795523_74795633_74819749_74819844_74835926_74836498_74838886
transcript_90522.known	chr17	+	4676	10	FSM	ENSG00000109066.14	ENST00000582330.2	4676	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	39.6543709545678	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTGTTTCCCACATCAC	74774021	True	NA	18	True	AATAAA	-12	NA	74776519	74839750	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_74776578_74777266_74777376_74785481_74785604_74788788_74788871_74790199_74790297_74790955_74791037_74795011_74795112_74795523_74795633_74819749_74819844_74835926
transcript_90524.known	chr17	+	1740	10	FSM	ENSG00000109066.14	ENST00000582773.5	1740	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	37.8270919961988	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGTTTCCCACATCACT	74774001	True	NA	19	True	AATAAA	-13	NA	74776499	74839751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_74776578_74777263_74777376_74785481_74785604_74788788_74788871_74790199_74790297_74790955_74791037_74795011_74795112_74795523_74795633_74819749_74819844_74838886
transcript_9053.nic	chr1	-	2644	13	NIC	ENSG00000079277.22	novel	2719	14	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_12	42.2238577899588	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGCCTATTTGGTGGT	-46602520	True	NA	-11	True	AATAAA	-13	NA	46604304	46557417	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_46558801_46560233_46560278_46561477_46561643_46562648_46562844_46565040_46565137_46568442_46568499_46572062_46572168_46574946_46575021_46576574_46576655_46580529_46580628_46583227_46583330_46594112_46594281_46604226
transcript_90539.known	chr17	-	1809	13	FSM	ENSG00000161513.12	ENST00000413947.6	1809	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	97.5536889216508	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGACAGGTGGAGGTGTGGG	-74871191	True	NA	-115	True	NA	NA	NA	74872976	74862608	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864348_74864479_74864565_74864823_74864932_74865718_74865821_74866130_74866245_74866445_74866569_74866783_74866877_74872035_74872108_74872197_74872317_74872865
transcript_90544.known	chr17	-	1766	12	FSM	ENSG00000161513.12	ENST00000582944.5	1766	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_9	78.1328599351956	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACCAGGTTGGGAACATG	-74871200	True	NA	-50	True	NA	NA	NA	74872985	74862543	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864348_74864479_74864565_74864823_74864932_74865718_74865821_74866130_74866245_74866445_74866545_74866783_74866877_74872035_74872134_74872865
transcript_90547.known	chr17	-	2482	12	FSM	ENSG00000161513.12	ENST00000578473.5	2482	12	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_11	93.4707272866973	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCATGGTTGATGGGGGA	-74871221	True	NA	-5	True	AATAAA	-15	NA	74873006	74862498	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864348_74864479_74864565_74864823_74864932_74865718_74865821_74866130_74866245_74866445_74866569_74866783_74866880_74872035_74872134_74872242
transcript_90548.known	chr17	-	1912	12	FSM	ENSG00000161513.12	ENST00000577509.5	1912	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_11	95.9141317072569	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAGAGCCATGGTTGAT	-74871183	True	NA	-11	True	AATAAA	-9	NA	74872968	74862504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864348_74864479_74864565_74864823_74864932_74865718_74865821_74866130_74866245_74866445_74866569_74866783_74866880_74872035_74872134_74872768
transcript_90549.known	chr17	-	1827	12	FSM	ENSG00000161513.12	ENST00000581530.5	1827	12	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_6	78.0350631087088	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCCATGGTTGATGGGG	-74871176	True	NA	-7	True	AATAAA	-13	NA	74872961	74862500	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864348_74864479_74864565_74864823_74864950_74865718_74865821_74866130_74866245_74866445_74866569_74866783_74866877_74872035_74872134_74872865
transcript_90553.known	chr17	-	1967	12	FSM	ENSG00000161513.12	ENST00000442102.6	1967	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	78.6376773405768	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAGGTTGGGAACATGCT	-74871246	True	NA	-48	True	NA	NA	NA	74873031	74862541	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864348_74864479_74864565_74864823_74864932_74865718_74865821_74866130_74866245_74866445_74866569_74866783_74867006_74872035_74872134_74872865
transcript_90558.known	chr17	-	1705	11	FSM	ENSG00000161513.12	ENST00000420580.6	1705	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	98.9213829260388	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATGGTTGATGGGGGAC	-74871189	True	NA	-4	True	AATAAA	-16	NA	74872974	74862497	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864348_74864479_74864565_74864823_74864932_74865718_74865821_74866130_74866245_74866783_74866880_74872035_74872134_74872865
transcript_9056.nic	chr1	-	2643	12	NIC	ENSG00000079277.22	novel	2686	13	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	36.5273587039126	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGTGGTCCTTTTTTTT	-46602511	True	NA	-1	True	AATAAA	-23	NA	46604295	46557407	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_46558801_46561477_46561643_46562648_46562844_46565040_46565137_46568442_46568499_46572062_46572168_46574946_46575021_46576574_46576655_46580529_46580628_46583227_46583330_46594112_46594281_46604184
transcript_9057.known	chr1	-	1270	12	FSM	ENSG00000079277.22	ENST00000428112.7	1270	12	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_11	41.8896622289186	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTAGCTGATGGCCTCT	-46602471	True	NA	NA	False	NA	NA	NA	46604255	46558698	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_46558801_46561477_46561643_46562648_46562844_46565040_46565137_46568442_46568499_46572062_46572168_46574946_46575021_46576574_46576655_46580529_46580628_46583227_46583330_46594112_46594281_46604226
transcript_90575.known	chr17	-	1762	11	FSM	ENSG00000161513.12	ENST00000583917.5	1762	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	100.245947549016	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAACAGCTGCAACCAAG	-74871230	True	NA	-24	True	NA	NA	NA	74873015	74862517	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864346_74864823_74864932_74865718_74865821_74866130_74866245_74866445_74866569_74866783_74866880_74872035_74872134_74872865
transcript_90576.known	chr17	-	2174	6	FSM	ENSG00000172782.13	ENST00000612771.5	2174	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	1.01980390271856	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAAATAACTTTGAATGT	-74893617	False	NA	NA	False	AATAAA	-40	NA	74893633	74877301	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_74878478_74879403_74879584_74881067_74881256_74882529_74882711_74892522_74892690_74893351
transcript_90577.known	chr17	+	2150	7	FSM	ENSG00000183034.13	ENST00000331427.9	2150	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCACTGTTTGTCTCTGT	NA	False	NA	NA	False	AATAAA	-18	NA	74924272	74933912	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_74924334_74924599_74924946_74925555_74925693_74927222_74927282_74927664_74927799_74930278_74931154_74933374
transcript_90578.known	chr17	-	3558	3	FSM	ENSG00000182040.9	ENST00000614341.5	3558	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	1	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCTTGTCCTTTAATGC	-74923173	True	NA	1	True	NA	NA	NA	74923255	74916082	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_74918077_74919453_74920672_74922909
transcript_90581.nnic	chr17	-	3188	19	NNC	ENSG00000167861.16	novel	3298	19	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_13	25.0624528570106	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGACTCTGTGGTTGAG	-74972784	False	NA	-4	True	AATAAA	-15	NA	74972809	74950742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_74951634_74951904_74952064_74952268_74952361_74953005_74953087_74953544_74953652_74954137_74954366_74955791_74955957_74958140_74958220_74958326_74958479_74958672_74958764_74958910_74959052_74959880_74959938_74960025_74960090_74961872_74961990_74962233_74962341_74962964_74963082_74963739_74963911_74964482_74964633_74972590
transcript_90584.known	chr17	-	3298	19	FSM	ENSG00000167861.16	ENST00000425042.7	3298	19	0	0	0	0	multi-exon	FALSE	canonical	2	72	junction_16	13.752665286014	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGACTCTGTGGTTGAGG	-74971239	True	NA	-3	True	AATAAA	-16	NA	74972759	74950741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_74951634_74951904_74952064_74952268_74952361_74953005_74953087_74953544_74953652_74954137_74954366_74955791_74955957_74958140_74958220_74958326_74958479_74958672_74958764_74958910_74959052_74959880_74959938_74960025_74960249_74961872_74961990_74962233_74962341_74962964_74963082_74963739_74963911_74964482_74964633_74972590
transcript_90594.nic	chr17	-	1796	12	ISM	ENSG00000167861.16	ENST00000425042.7	3298	19	-50	7227	-38	0	5prime_fragment	FALSE	canonical	2	72	junction_9	13.8456664461789	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTTATCTATCATCAT	-74972784	False	NA	NA	False	ATTAAA	-27	NA	74972809	74957968	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_74958220_74958326_74958479_74958672_74958764_74958910_74959052_74959880_74959938_74960025_74960249_74961872_74961990_74962233_74962341_74962964_74963082_74963739_74963911_74964482_74964633_74972590
transcript_90598.nic	chr17	-	2146	5	NIC	ENSG00000167861.16	novel	3298	19	NA	NA	-38	331	intron_retention	FALSE	canonical	3	107	junction_1	4.65698400254929	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAATAATTAATAATATAT	-74972784	False	NA	NA	False	AATAAA	-5	NA	74972809	74961265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_74961990_74962233_74962341_74962964_74963911_74964482_74964633_74972590
transcript_90606.known	chr17	+	3536	5	FSM	ENSG00000109089.7	ENST00000337231.5	3536	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_4	11.056672193748	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCATCTCTGTGCATCT	74985588	True	NA	26	True	AATAAA	-29	NA	74987631	75005800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_74988123_74999503_74999617_75001340_75001490_75002063_75002229_75003182
transcript_90607.nnic	chr17	+	3509	5	NNC	ENSG00000109089.7	novel	3536	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	36.3412644248931	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCATCTCTGTGCATCT	74985588	True	NA	26	True	AATAAA	-29	NA	74987631	75005800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_74988123_74999503_74999617_75001340_75001490_75002063_75002229_75003209
transcript_90614.known	chr17	+	593	6	FSM	ENSG00000167862.10	ENST00000584208.5	593	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	107.961845112058	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGGCTGAGACAAAAGAG	75007028	True	NA	NA	False	AAAACA	-9	NA	75012669	75020939	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75012873_75017077_75017115_75019699_75019760_75020312_75020396_75020466_75020658_75020920
transcript_90615.known	chr17	+	894	6	FSM	ENSG00000167862.10	ENST00000301585.10	894	6	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_4	19.9138143006306	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGCTTCCCTTCTCATTC	75007028	True	NA	10	True	AATAAA	-13	NA	75012669	75021261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75012873_75017077_75017115_75019699_75019760_75020312_75020396_75020487_75020658_75020920
transcript_90617.known	chr17	+	3657	6	FSM	ENSG00000180901.11	ENST00000322444.7	3657	6	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_2	14.7837748900611	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGTGGTGTGTTTTCCA	75045602	True	NA	25	True	AATAAA	-24	NA	75047224	75065886	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75047590_75049219_75049329_75053013_75053106_75059509_75059606_75062119_75062246_75063017
transcript_90618.known	chr17	-	609	6	FSM	ENSG00000167863.12	ENST00000301587.9	609	6	0	0	0	0	multi-exon	FALSE	canonical	3	2775	junction_5	366.032457577194	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGGGTGTGCTTCTTCT	-75011759	True	NA	-11	True	ATTAAA	-16	NA	75046969	75038862	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75039064_75039208_75039272_75040091_75040164_75042180_75042278_75042528_75042660_75046924
transcript_90621.known	chr17	-	553	5	FSM	ENSG00000167863.12	ENST00000344546.8	553	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	1482.69338957857	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGGGTGTGCTTCTTCT	-75011775	True	NA	-11	True	ATTAAA	-16	NA	75046985	75038862	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75039064_75039208_75039272_75042180_75042278_75042528_75042660_75046924
transcript_90623.nic	chr17	-	377	4	ISM	ENSG00000167863.12	ENST00000301587.9	609	6	-38	1235	-22	-1080	5prime_fragment	FALSE	canonical	3	2775	junction_3	471.483003110634	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGATGTAAGTAGTTGAGG	-75011797	True	NA	NA	False	GATAAA	-31	NA	75047007	75040097	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_75040164_75042180_75042278_75042528_75042660_75046924
transcript_90633.known	chr17	+	1940	7	FSM	ENSG00000170190.16	ENST00000329783.9	1940	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	23.1516738055805	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAGGAGGTTGGTTTGGAT	75086271	True	NA	NA	False	AATAAA	-22	NA	75087953	75106162	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75088045_75089150_75089305_75093588_75093836_75098037_75098182_75100006_75100817_75103969_75104181_75105879
transcript_90635.nic	chr17	+	2021	7	NIC	ENSG00000170190.16	novel	1940	7	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	32.545694373023	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAGGAGGTTGGTTTGGAT	75086227	True	NA	NA	False	AATAAA	-22	NA	75087909	75106162	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_75088045_75089113_75089305_75093588_75093836_75098037_75098182_75100006_75100817_75103969_75104181_75105879
transcript_90639.known	chr17	+	2051	6	FSM	ENSG00000170190.16	ENST00000450736.6	2051	6	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	19.9358972710034	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAAAACGTAGGAGG	75088923	False	NA	NA	False	AATAAA	-11	NA	75088937	75106151	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75089305_75093588_75093836_75098037_75098182_75100006_75100817_75103969_75104181_75105879
transcript_90645.nic	chr17	+	3666	6	ISM	ENSG00000170190.16	ENST00000329783.9	1940	7	-27	0	-14	0	intron_retention	FALSE	canonical	3	54	junction_1	24.416387939251	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAGGAGGTTGGTTTGGAT	75086244	True	NA	NA	False	AATAAA	-22	NA	75087926	75106162	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_75088045_75089150_75089305_75093588_75093836_75098037_75098182_75100006_75100817_75103969
transcript_90649.known	chr17	+	1688	6	FSM	ENSG00000170190.16	ENST00000578376.5	1688	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	35.4175097938858	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTAACCAGCGTCTAAG	75086277	True	NA	NA	False	NA	NA	NA	75087959	75104180	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75088045_75089113_75089305_75093588_75093836_75098037_75098182_75100006_75100817_75103969
transcript_90659.nnic	chr17	+	2211	5	NNC	ENSG00000170190.16	novel	1940	7	NA	NA	-14	0	intron_retention	FALSE	canonical	2	5	junction_3	44.538606848441	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAGGAGGTTGGTTTGGAT	75086244	True	NA	NA	False	AATAAA	-22	NA	75087926	75106162	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_75089305_75093588_75093836_75098037_75098182_75104021_75104181_75105879
transcript_90668.nic	chr17	+	2001	3	ISM	ENSG00000170190.16	ENST00000580123.5	2019	7	203	7746	-11	-1593	internal_fragment	FALSE	canonical	3	100	junction_1	12	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCAGGCTTGGTGGCGG	75086247	True	NA	NA	False	AATACA	-5	NA	75087929	75098416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_75089305_75093588_75093836_75098037
transcript_9067.nic	chr1	-	754	6	ISM	ENSG00000079277.22	ENST00000649800.1	2809	14	-1	17418	-1	0	5prime_fragment	FALSE	canonical	3	113	junction_2	31.7048892128643	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCCTTGATTTGGGAGA	-46602511	True	NA	-1	True	AATAAA	-20	NA	46604295	46574825	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_46575021_46576574_46576655_46580529_46580628_46583227_46583330_46594112_46594281_46604184
transcript_90670.nic	chr17	-	1015	5	NIC	ENSG00000125458.7	novel	958	5	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_2	239.730577941155	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTCTAGGACCCTTTATT	-75123287	True	NA	-6	True	AATAAA	-17	NA	75131776	75130227	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_75130643_75130752_75130868_75130964_75131106_75131180_75131282_75131533
transcript_90672.known	chr17	-	653	5	FSM	ENSG00000125458.7	ENST00000582170.1	653	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	259.019666241774	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCAGCTGGAGCTAAAGG	-75123255	True	NA	NA	False	NA	NA	NA	75131744	75130472	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75130638_75130752_75130868_75131044_75131106_75131180_75131282_75131533
transcript_90675.known	chr17	-	726	4	FSM	ENSG00000125458.7	ENST00000579023.5	726	4	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	265.892208736297	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGACAACTGGAGGGAGA	-75123241	True	NA	NA	False	NA	NA	NA	75131730	75130545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75130643_75130752_75130868_75130964_75131282_75131533
transcript_90676.known	chr17	-	648	4	FSM	ENSG00000125458.7	ENST00000578095.1	648	4	0	0	0	0	multi-exon	FALSE	canonical	3	629	junction_2	11.323525167642	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACAAGGAGACGGCTGCTC	-75123268	True	NA	NA	False	NA	NA	NA	75131757	75130570	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75130643_75130752_75130868_75131044_75131282_75131533
transcript_90680.known	chr17	-	503	4	FSM	ENSG00000125458.7	ENST00000579082.1	503	4	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	257.207222984806	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCTGCTCATTGATGACA	-75123225	True	NA	NA	False	NA	NA	NA	75131714	75130787	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75130868_75130964_75131106_75131180_75131282_75131533
transcript_90686.known	chr17	+	1204	3	FSM	ENSG00000125449.7	ENST00000582136.5	1204	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	17.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTTCTCTTGTGTTTAT	75108846	True	NA	12	True	AATGAA	-27	NA	75109977	75114826	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75110380_75110462_75110607_75114168
transcript_90687.known	chr17	+	2151	3	FSM	ENSG00000125449.7	ENST00000245543.6	2151	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	3	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATTTCCATGCCAGCCA	75108837	True	NA	70	True	ATTAAA	-21	NA	75109968	75130272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75110380_75110462_75110607_75128676
transcript_90688.known	chr17	-	921	4	FSM	ENSG00000125458.7	ENST00000582744.5	921	4	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	259.265629551367	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAACCAGTCGGGACCTT	-75131462	False	NA	-49	True	AATACA	-4	NA	75131473	75130270	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75130643_75130752_75130868_75130964_75131106_75131180
transcript_90689.known	chr17	-	1315	3	FSM	ENSG00000125458.7	ENST00000583655.5	1315	3	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	284	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTCTAGGACCCTTTATT	-75123260	True	NA	-6	True	AATAAA	-17	NA	75131749	75130227	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75130643_75130752_75130868_75130964
transcript_9069.known	chr1	-	588	4	FSM	ENSG00000079277.22	ENST00000525888.5	588	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	59.1739432145227	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCAGCTTCCATTTTAAA	-46602462	True	NA	NA	False	NA	NA	NA	46604246	46584546	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_46584804_46585873_46585975_46594112_46594281_46604184
transcript_90690.known	chr17	-	860	4	FSM	ENSG00000125458.7	ENST00000582160.5	860	4	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_3	15.9652400197707	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGGACCCTTTATTTGG	-75131435	False	NA	-3	True	AATAAA	-20	NA	75131446	75130224	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75130643_75130752_75130868_75131044_75131106_75131180
transcript_90691.known	chr17	-	720	4	FSM	ENSG00000125458.7	ENST00000578407.5	720	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	295.824272161701	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCTTCTAGGACCCTTTA	-75131672	False	NA	-8	True	AATAAA	-15	NA	75131683	75130229	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75130638_75131044_75131106_75131180_75131282_75131533
transcript_90694.known	chr17	-	1434	5	FSM	ENSG00000189159.16	ENST00000409753.8	1434	5	0	0	0	0	multi-exon	FALSE	canonical	3	1884	junction_3	62.9166114790045	414	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGTACTGTGTCTTCT	-75109722	True	NA	-6	True	AGTAAA	-20	NA	75154512	75135247	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75136251_75146665_75146685_75147555_75147654_75148528_75148672_75154341
transcript_90697.known	chr17	-	490	4	FSM	ENSG00000188612.12	ENST00000578238.2	490	4	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_3	1983.26011069317	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACCAAGATTACATTCTCA	-75182536	False	69853	NA	False	NA	NA	NA	75182563	75168297	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75168402_75174751_75174824_75181056_75181189_75182381
transcript_90698.known	chr17	-	3166	4	FSM	ENSG00000188612.12	ENST00000420826.7	3166	4	0	0	0	0	multi-exon	FALSE	canonical	3	3634	junction_3	361.719043826375	944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTAGTATTATGTGTTA	-75113106	True	NA	-1	True	AATATA	-17	NA	75182959	75165585	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75168402_75174751_75174824_75181056_75181189_75182813
transcript_90701.known	chr17	-	809	3	FSM	ENSG00000188612.12	ENST00000314523.7	809	3	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_1	1678.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTACGTAGCTGTTACA	-75113103	True	NA	49	True	NA	NA	NA	75182956	75167867	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75168402_75181056_75181189_75182813
transcript_9071.known	chr1	-	2815	4	FSM	ENSG00000142961.16	ENST00000319928.9	2738	4	-73	-4	-73	4	multi-exon	FALSE	canonical	3	12	junction_3	4.54606056566195	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGGGAAGCGGTGATCT	-46616867	False	NA	NA	False	AATAAA	-20	NA	46616884	46607714	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_46609685_46610001_46610205_46612903_46613372_46616710
transcript_9072.known	chr1	-	5725	3	FSM	ENSG00000142961.16	ENST00000371940.1	5725	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	2	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAGCCACTGGTGGGAA	-46616448	False	NA	NA	False	AATAAA	-10	NA	46616465	46607724	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_46609685_46610001_46610205_46612903
transcript_90723.known	chr17	+	2133	19	FSM	ENSG00000125450.11	ENST00000245544.9	2133	19	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_7	59.1678925277286	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCTTAGAGTCCACCCAG	75201276	True	NA	27	True	AATAAA	-19	NA	75205678	75235758	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75205795_75208526_75208621_75209822_75209986_75211991_75212063_75213075_75213120_75215753_75215824_75218184_75218307_75225102_75225238_75225341_75225465_75225697_75225830_75226050_75226158_75231339_75231424_75231572_75231639_75231827_75231980_75232850_75232969_75233057_75233159_75234636_75234789_75235099_75235202_75235577
transcript_9073.known	chr1	-	464	3	FSM	ENSG00000079277.22	ENST00000465783.6	464	3	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	7	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGAAGCTGTATTCACTG	-46592496	False	NA	6	True	AATAAA	-25	NA	46594280	46580433	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_46580628_46583227_46583330_46594112
transcript_9074.known	chr1	-	594	5	FSM	ENSG00000079277.22	ENST00000486716.5	594	5	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_2	33.6377763831083	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCCTTGATTTGGGAGA	-46592447	False	NA	-1	True	AATAAA	-20	NA	46594231	46574825	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_46575021_46576574_46576655_46580529_46580628_46583227_46583330_46594112
transcript_90742.known	chr17	+	1890	18	FSM	ENSG00000125450.11	ENST00000579298.5	1890	18	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	123.906008578833	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTATCTTTGTATGGCA	75201317	True	NA	-40	True	NA	NA	NA	75205719	75235691	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75205795_75208526_75208621_75209822_75209986_75211991_75212063_75213075_75213120_75215753_75215824_75218184_75218307_75225341_75225465_75225697_75225830_75226050_75226158_75231339_75231424_75231572_75231639_75231827_75231980_75232850_75232969_75233057_75233159_75234636_75234789_75235099_75235202_75235577
transcript_90748.known	chr17	+	2010	18	FSM	ENSG00000125450.11	ENST00000579324.5	2010	18	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	125.74483967894	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTCTTAGAGTCCACCCA	75201304	True	NA	26	True	AATAAA	-18	NA	75205706	75235757	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75205795_75209822_75209986_75211991_75212063_75213075_75213120_75215753_75215824_75218184_75218307_75225102_75225238_75225341_75225465_75225697_75225830_75226050_75226158_75231339_75231424_75231572_75231639_75231827_75231980_75232850_75232969_75233057_75233159_75234636_75234789_75235099_75235202_75235577
transcript_9075.known	chr1	-	2719	14	FSM	ENSG00000079277.22	ENST00000371946.9	2719	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	54.5422044934555	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGCCTATTTGGTGGT	-46602430	True	NA	-11	True	AATAAA	-13	NA	46604214	46557417	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_46558801_46560233_46560278_46561477_46561643_46562648_46562844_46565040_46565137_46568442_46568499_46571416_46571540_46572062_46572168_46574946_46575021_46576574_46576655_46580529_46580628_46583227_46583330_46594112_46594281_46604184
transcript_90756.known	chr17	+	2233	17	FSM	ENSG00000125450.11	ENST00000581104.5	2233	17	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	123.203195347158	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTATATAGATTTTTTTA	75201317	True	NA	-21	True	NA	NA	NA	75205719	75235710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75205795_75208526_75208621_75209822_75209986_75211991_75212063_75213075_75213120_75215753_75215824_75225102_75225238_75225341_75225465_75225697_75225830_75226050_75226158_75231339_75231424_75231572_75231639_75231827_75231980_75232850_75232969_75233057_75233159_75234636_75235202_75235577
transcript_90779.known	chr17	-	4034	18	FSM	ENSG00000125447.18	ENST00000621870.4	4034	18	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_17	100.560711748699	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGAATCTTCCTAGTATA	-75252945	True	NA	-5	True	AATAAA	-16	NA	75261600	75236598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75238390_75238651_75238763_75238913_75239084_75239374_75239572_75239788_75240109_75240341_75240413_75240811_75241058_75241399_75241517_75241614_75241697_75242335_75242474_75242830_75242912_75243062_75243167_75243446_75243571_75244618_75244718_75246508_75246585_75246711_75246797_75248839_75249009_75261547
transcript_90787.known	chr17	-	3871	17	FSM	ENSG00000125447.18	ENST00000537686.6	3871	17	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_14	25.3475066574604	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGAATCTTCCTAGTATA	-75252951	True	NA	-5	True	AATAAA	-16	NA	75261606	75236598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75238390_75238651_75238763_75238913_75239084_75239374_75239572_75239788_75240109_75240341_75240413_75240811_75241058_75241399_75241517_75241614_75241697_75242335_75242474_75242830_75242912_75243062_75243167_75243446_75243571_75244618_75244718_75246508_75246585_75246711_75246797_75261547
transcript_90804.known	chr17	-	3766	16	FSM	ENSG00000125447.18	ENST00000538886.5	3766	16	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_13	68.0263347698685	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGAATCTTCCTAGTATA	-75252945	True	NA	-5	True	AATAAA	-16	NA	75261600	75236598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75238390_75238651_75238763_75238913_75239084_75239374_75239572_75239788_75240109_75240341_75240413_75240811_75241058_75241399_75241517_75241614_75241697_75242335_75242474_75242830_75242912_75243062_75243167_75243446_75243571_75246508_75246585_75246711_75246797_75261547
transcript_9084.known	chr1	-	1760	9	FSM	ENSG00000123472.12	ENST00000574428.5	1760	9	0	0	0	0	multi-exon	FALSE	canonical	3	627	junction_4	89.0996632990271	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTAATCCTGGTTTGCATG	-46662040	True	NA	-6	True	AATAAA	-19	NA	46668364	46635044	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_46635971_46643193_46643302_46645160_46645257_46652580_46652629_46653816_46653868_46658126_46658190_46658686_46658738_46665255_46665365_46668056
transcript_90842.known	chr17	-	1358	7	FSM	ENSG00000125457.15	ENST00000245551.9	1358	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	69.8593825719447	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACTGCTTCCTTTATAT	-75269973	True	NA	NA	False	AATAAA	-14	NA	75271173	75266232	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75266968_75267537_75267631_75267745_75267902_75268082_75268193_75269346_75269449_75270113_75270246_75271143
transcript_90843.known	chr17	-	1531	7	FSM	ENSG00000125457.15	ENST00000577542.5	1531	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_6	77.6818654656428	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAATTTTCTAATAAATC	-75269955	True	NA	NA	False	NA	NA	NA	75271155	75266263	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75266968_75267537_75267631_75267745_75267902_75268082_75268193_75269346_75269470_75270113_75270246_75270942
transcript_90844.known	chr17	-	1419	7	FSM	ENSG00000125457.15	ENST00000579297.5	1419	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_5	62.651593932016	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTTTCTGATACTAAAAC	-75270027	True	NA	NA	False	NA	NA	NA	75271227	75266246	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75266968_75267537_75267631_75267745_75267902_75268082_75268193_75269346_75269470_75270113_75270246_75271143
transcript_90847.nic	chr17	+	1203	6	NIC	ENSG00000125445.11	novel	731	5	NA	NA	-33	0	combination_of_known_junctions	TRUE	canonical	3	141	junction_5	598.471720300968	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTGGTGTGACTTGTGC	NA	False	NA	36	True	TATAAA	-6	NA	75261640	75266363	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_75261984_75262496_75262689_75262803_75262868_75263339_75263508_75265701_75265967_75266192
transcript_90850.known	chr17	-	2058	6	FSM	ENSG00000125457.15	ENST00000579194.6	2058	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_5	67.727099450663	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACCAGTTCAGCGTGAGAA	-75269799	False	NA	NA	False	NA	NA	NA	75270999	75266277	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75266968_75267537_75267631_75267745_75267902_75268082_75268193_75269346_75269470_75270113
transcript_90851.known	chr17	-	855	6	FSM	ENSG00000125457.15	ENST00000580717.5	855	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_5	70.47666280408	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAGACAACGCCAGCTG	-75269933	True	NA	NA	False	NA	NA	NA	75271133	75266794	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75266968_75267537_75267631_75267745_75267902_75268082_75268193_75270113_75270246_75270942
transcript_90852.known	chr17	-	1319	6	FSM	ENSG00000125457.15	ENST00000325102.13	1319	6	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_5	33.434114314574	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTCCTTTATATATCCA	-75270031	True	NA	NA	False	AATAAA	-19	NA	75271231	75266227	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75266968_75267537_75267631_75267745_75267902_75268082_75268193_75270113_75270246_75271143
transcript_90854.known	chr17	-	1708	6	FSM	ENSG00000125457.15	ENST00000649805.1	1708	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	59.3552019624228	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGAGCCACTGCACTGT	-75270011	True	NA	NA	False	NA	NA	NA	75271211	75266511	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75267631_75267745_75267902_75268082_75268193_75269346_75269470_75270113_75270246_75271143
transcript_90856.known	chr17	+	1204	5	FSM	ENSG00000125445.11	ENST00000245539.11	1204	5	0	0	0	0	multi-exon	FALSE	canonical	3	1592	junction_3	38.1141377968858	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGCTCTGCCTCCACCC	75249002	True	NA	49	True	TATAAA	-19	NA	75261878	75266376	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75261984_75262496_75262689_75262803_75262868_75263339_75263508_75265701
transcript_90858.known	chr17	-	1345	5	FSM	ENSG00000125457.15	ENST00000618645.5	1345	5	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_4	18.9868375460475	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTACACCAGTTCAGCGT	-75269214	False	NA	NA	False	NA	NA	NA	75270414	75266282	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75266968_75267537_75267631_75267745_75267902_75268082_75268193_75270113
transcript_90860.known	chr17	-	952	5	FSM	ENSG00000125457.15	ENST00000580571.5	952	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	65.3313668921752	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCATAGCCACTGGTGGG	-75270027	True	NA	NA	False	NA	NA	NA	75271227	75266434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75266968_75267537_75267631_75268082_75268193_75270113_75270246_75271143
transcript_90862.known	chr17	+	1717	4	FSM	ENSG00000125445.11	ENST00000579761.5	1717	4	0	0	0	0	multi-exon	FALSE	canonical	3	1592	junction_3	42.1979462375442	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTTTCTTGTGTTCTCC	75259542	True	NA	NA	False	NA	NA	NA	75261673	75264490	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75261984_75262496_75262689_75262803_75262868_75263339
transcript_90867.known	chr17	-	319	2	FSM	ENSG00000125457.15	ENST00000580099.1	319	2	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCCACCCTTCACCTTCC	-75268977	False	NA	NA	False	NA	NA	NA	75270177	75267937	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75268193_75270113
transcript_90868.known	chr17	+	1638	4	FSM	ENSG00000125445.11	ENST00000579002.5	1638	4	0	0	0	0	multi-exon	FALSE	canonical	3	1592	junction_2	17.9876500843094	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTTGTCCTTATACAAAA	75249035	True	NA	3	True	NA	NA	NA	75261911	75266330	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75262689_75262803_75262868_75263339_75263508_75265701
transcript_9087.nic	chr1	-	1842	8	NIC	ENSG00000123472.12	novel	1760	9	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	272.341022714282	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTAATCCTGGTTTGCATG	-46668484	False	NA	-6	True	AATAAA	-19	NA	46668497	46635044	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_46635971_46643193_46643302_46645160_46645257_46652580_46652629_46658126_46658190_46658686_46658738_46665255_46665365_46668056
transcript_90873.known	chr17	-	1554	8	FSM	ENSG00000125454.12	ENST00000580994.5	1554	8	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_7	43.4638014998266	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCAACCTATTTAATAGAC	-75286951	True	NA	-54	True	NA	NA	NA	75289411	75273029	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75273640_75277352_75277484_75278151_75278336_75283422_75283594_75286303_75286460_75286632_75286803_75288387_75288462_75289353
transcript_90874.known	chr17	-	1630	8	FSM	ENSG00000125454.12	ENST00000416858.7	1630	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_7	64.3948280341754	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTATCTTACTCCATCT	-75286973	True	NA	-16	True	ATTAAA	-13	NA	75289433	75272991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75273640_75277352_75277484_75278151_75278336_75283422_75283594_75286303_75286460_75286632_75286803_75288501_75288592_75289353
transcript_90876.known	chr17	-	1496	7	FSM	ENSG00000125454.12	ENST00000442286.6	1496	7	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_6	46.8780924905819	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTTATCTTACTCCATC	-75286930	True	NA	-17	True	ATTAAA	-12	NA	75289390	75272992	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75273640_75277352_75277484_75278151_75278336_75283422_75283594_75286303_75286460_75286632_75286803_75289353
transcript_90878.nic	chr17	-	1370	6	NIC	ENSG00000125454.12	novel	1630	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_5	64.2669432912442	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTATCTTACTCCATCT	-75286973	True	NA	-16	True	ATTAAA	-13	NA	75289433	75272991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_75273640_75277352_75277484_75278151_75278336_75283422_75283594_75286303_75286460_75289353
transcript_90881.known	chr17	-	693	6	FSM	ENSG00000125454.12	ENST00000583332.5	693	6	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	65.4809896076716	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTGAAGGCTGCCCTCT	-75286926	True	NA	NA	False	NA	NA	NA	75289386	75273550	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75273640_75283422_75283594_75286303_75286460_75286632_75286803_75288387_75288462_75289353
transcript_90886.known	chr17	-	3273	6	FSM	ENSG00000177885.15	ENST00000316804.10	3273	6	0	0	0	0	multi-exon	FALSE	canonical	3	705	junction_5	74.4859718336278	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTATCTTTTTTTCCCC	-75388986	True	NA	-6	True	AATAAA	-19	NA	75405678	75318075	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75320554_75321658_75321828_75325897_75326021_75332699_75332798_75393550_75393766_75405488
transcript_9089.known	chr1	-	1241	7	FSM	ENSG00000123472.12	ENST00000329231.8	1241	7	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	287.383261323427	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCATCTTTATGAACTCA	-46668414	False	NA	NA	False	NA	NA	NA	46668427	46635422	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_46635971_46652580_46652629_46653816_46653868_46658126_46658190_46658686_46658738_46665255_46665365_46668056
transcript_90893.known	chr17	-	3181	5	FSM	ENSG00000177885.15	ENST00000316615.9	3181	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	349.933118609828	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTATCTTTTTTTCCCC	-75389017	True	NA	-6	True	AATAAA	-19	NA	75405709	75318075	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75320554_75321658_75321828_75332699_75332798_75393550_75393766_75405488
transcript_90901.known	chr17	-	555	2	FSM	ENSG00000177885.15	ENST00000577711.1	555	2	0	0	0	0	multi-exon	FALSE	canonical	3	705	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGTAGAATATTAAATAT	-75388989	True	NA	NA	False	NA	NA	NA	75405681	75393403	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75393766_75405488
transcript_90902.known	chr17	-	3182	5	FSM	ENSG00000177885.15	ENST00000392564.5	3182	5	0	0	0	0	multi-exon	FALSE	canonical	3	808	junction_2	45.985731482711	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTATCTTTTTTTCCCC	-75391775	True	NA	-6	True	AATAAA	-19	NA	75393864	75318075	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75320554_75321658_75321828_75325897_75326021_75332699_75332798_75393550
transcript_90908.nic	chr17	+	5021	32	NIC	ENSG00000177728.17	novel	5412	32	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	37.066804163074	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGCTGGTCTGTAAGG	75455570	True	NA	NA	False	ATTAAA	-23	NA	75456615	75500090	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_75456752_75471799_75471930_75485427_75485548_75485870_75485999_75486289_75486427_75487931_75488135_75488758_75488911_75489265_75489369_75489575_75489663_75490233_75490351_75490701_75490759_75491048_75491154_75491302_75491456_75491690_75491853_75492473_75492790_75492928_75493103_75493490_75493594_75493698_75493917_75494626_75494809_75494895_75495035_75495283_75495400_75495543_75495644_75495965_75496075_75496281_75496472_75496729_75496808_75497112_75497199_75497780_75497863_75498174_75498324_75498443_75498539_75498628_75498723_75498911_75499083_75499261
transcript_90911.known	chr17	+	5412	32	FSM	ENSG00000177728.17	ENST00000314256.12	5412	32	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	35.5635176511144	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTCTCTCTGCTTAGA	75455589	True	NA	NA	False	AATAAA	-17	NA	75456634	75500452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75456752_75471799_75471930_75485427_75485548_75485870_75485999_75486289_75486427_75487931_75488135_75488758_75488911_75489265_75489369_75489575_75489663_75490233_75490351_75490701_75490759_75491048_75491154_75491302_75491456_75491690_75491901_75492473_75492790_75492928_75493103_75493490_75493594_75493698_75493917_75494626_75494809_75494895_75495035_75495283_75495400_75495543_75495644_75495965_75496075_75496281_75496472_75496729_75496808_75497112_75497199_75497780_75497863_75498174_75498324_75498443_75498539_75498628_75498723_75498911_75499083_75499261
transcript_90917.nic	chr17	+	5081	32	NIC	ENSG00000177728.17	novel	5412	32	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	36.4863950525864	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGCTGGTCTGTAAGG	75455570	True	NA	NA	False	ATTAAA	-23	NA	75456615	75500090	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_75456752_75471799_75471930_75485427_75485548_75485870_75485999_75486289_75486427_75487931_75488135_75488758_75488911_75489265_75489369_75489575_75489663_75490233_75490351_75490701_75490759_75491048_75491154_75491302_75491468_75491690_75491901_75492473_75492790_75492928_75493103_75493490_75493594_75493698_75493917_75494626_75494809_75494895_75495035_75495283_75495400_75495543_75495644_75495965_75496075_75496281_75496472_75496729_75496808_75497112_75497199_75497780_75497863_75498174_75498324_75498443_75498539_75498628_75498723_75498911_75499083_75499261
transcript_9093.known	chr1	-	535	6	FSM	ENSG00000123472.12	ENST00000474020.5	535	6	0	0	0	0	multi-exon	FALSE	canonical	3	627	junction_1	94.1985137887005	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTACTTAATAAAGATGC	-46668096	False	NA	NA	False	AATAAA	-41	NA	46668109	46652420	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_46652629_46653816_46653868_46658126_46658190_46658686_46658738_46665255_46665365_46668056
transcript_90956.known	chr17	-	4969	20	FSM	ENSG00000177303.10	ENST00000321617.8	4969	20	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_19	13.3100674204469	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGCTGTGTGTTTGCCTC	-75512732	True	NA	-1	True	AATGAA	-18	NA	75515537	75500260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75501171_75501467_75501691_75501778_75503255_75503388_75503528_75503658_75503761_75503851_75503963_75504214_75504307_75504419_75504481_75504571_75504694_75504811_75505074_75505556_75505652_75505820_75505930_75506304_75506414_75506582_75506714_75506798_75506895_75506983_75507130_75507583_75507682_75508233_75508286_75513710_75514209_75515400
transcript_90957.nnic	chr17	-	5041	20	NNC	ENSG00000177303.10	novel	4969	20	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_19	14.1572099227844	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGCTGTGTGTTTGCCTC	-75515199	False	NA	-1	True	AATGAA	-18	NA	75515567	75500260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_75501171_75501467_75501691_75501778_75503255_75503388_75503528_75503658_75503761_75503851_75503963_75504214_75504307_75504419_75504481_75504571_75504694_75504811_75505074_75505556_75505652_75505820_75505930_75506304_75506414_75506582_75506714_75506798_75506895_75506983_75507130_75507583_75507682_75508233_75508286_75513710_75514251_75515400
transcript_9096.known	chr1	-	5817	11	FSM	ENSG00000159658.15	ENST00000371933.8	5817	11	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_4	42.4268782730948	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCTGACTAAAGCCTCT	-46715612	True	NA	-2	True	AATAAA	-22	NA	46719114	46675158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_46678637_46683299_46683426_46684490_46684603_46686783_46686871_46688352_46688545_46689586_46689692_46691826_46691938_46696550_46696650_46707905_46708052_46716294_46716444_46717902
transcript_90996.known	chr17	+	1921	11	FSM	ENSG00000182173.14	ENST00000679429.1	1921	11	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_5	161.303719733923	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTTCTGTATGTACTG	75511977	True	NA	13	True	ATTAAA	-16	NA	75516535	75524735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75516617_75516745_75516911_75517008_75517073_75517160_75517245_75517556_75517656_75519002_75519048_75521408_75521511_75521704_75522334_75523274_75523336_75523662_75523780_75524261
transcript_90999.known	chr17	+	2093	11	FSM	ENSG00000182173.14	ENST00000680999.1	2093	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	161.943693918596	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATAAAGCCAAAGCCATTA	75511989	True	NA	-24	True	NA	NA	NA	75516547	75524698	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75516617_75516745_75516911_75517008_75517073_75517160_75517245_75517556_75517656_75518994_75519048_75521408_75521511_75521704_75522522_75523249_75523336_75523662_75523780_75524261
transcript_91000.known	chr17	+	2082	11	FSM	ENSG00000182173.14	ENST00000679782.1	2082	11	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_8	159.948898089359	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATAAAGCCAAAGCCATTA	75511989	True	NA	-24	True	NA	NA	NA	75516547	75524698	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75516617_75516745_75516911_75517008_75517073_75517160_75517245_75517556_75517656_75518994_75519048_75521408_75521511_75521704_75522536_75523274_75523336_75523662_75523780_75524261
transcript_91016.known	chr17	+	2010	10	FSM	ENSG00000182173.14	ENST00000434205.8	2010	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	171.242518084733	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTTCTGTATGTACTG	75515970	False	NA	13	True	ATTAAA	-16	NA	75516059	75524735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75516387_75517008_75517073_75517160_75517245_75517556_75517656_75518994_75519048_75521408_75521511_75521704_75522334_75523274_75523336_75523662_75523780_75524261
transcript_91020.known	chr17	+	2555	10	FSM	ENSG00000182173.14	ENST00000680528.1	2555	10	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_1	53.0229393636889	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGCAGAGGATGGAGCTT	75511977	True	NA	NA	False	NA	NA	NA	75516535	75524420	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75516617_75516745_75516911_75517008_75517073_75517160_75517245_75517556_75517656_75518994_75519048_75521408_75521511_75521704_75523336_75523662_75523780_75524261
transcript_91035.known	chr17	+	3036	9	FSM	ENSG00000182173.14	ENST00000580013.6	3036	9	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_1	52.3043975206674	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTTCTTTTCTGCTGTTT	75511993	True	NA	1	True	ATTAAA	-4	NA	75516551	75524723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75516617_75516745_75516911_75517008_75517073_75517160_75517245_75517556_75517656_75518994_75519048_75521408_75523336_75523662_75523780_75524261
transcript_9104.known	chr1	-	5641	10	FSM	ENSG00000159658.15	ENST00000674435.1	5641	10	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_4	56.2753372290821	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAATGTGTCTGACTAAA	-46715634	True	NA	-8	True	AATAAA	-16	NA	46719136	46675164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_46678637_46683299_46683426_46684490_46684603_46686783_46686871_46689586_46689692_46691826_46691938_46696550_46696650_46707905_46708052_46716294_46716444_46717902
transcript_91043.known	chr17	+	2632	9	FSM	ENSG00000182173.14	ENST00000579449.2	2632	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	177.337205275712	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTTCTTTTCTGCTGTTT	75512038	True	NA	1	True	ATTAAA	-4	NA	75516596	75524723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75516617_75517008_75517073_75517160_75517245_75517556_75517656_75518994_75519048_75521408_75521511_75521704_75523336_75523662_75523780_75524261
transcript_91064.nnic	chr17	-	2677	3	Antisense	novelGene_ENSG00000073350.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	9.5	43	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTAACATCTTTCTTTCG	NA	False	NA	-29	True	AATAAA	-16	NA	75525522	75521149	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr17_-_75522499_75523252_75523369_75524310
transcript_91069.known	chr17	+	2895	10	FSM	ENSG00000182173.14	ENST00000681282.1	2895	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	171.300256210485	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTTCTTTTCTGCTGTTT	75511969	True	NA	1	True	ATTAAA	-4	NA	75516527	75524723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75516617_75516745_75516911_75517008_75517073_75517160_75517245_75517556_75517656_75518994_75519048_75521408_75521511_75521675_75523336_75523662_75523780_75524261
transcript_91082.known	chr17	+	1374	10	FSM	ENSG00000073350.14	ENST00000375227.8	1374	10	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_6	40.2044159481069	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTGTGGCACGTACCTG	75523639	True	NA	9	True	AATAAA	-12	NA	75525731	75564721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75525826_75543396_75543502_75556045_75556144_75558154_75558237_75558511_75558628_75559251_75559411_75563015_75563179_75563330_75563464_75563751_75563807_75564352
transcript_91083.known	chr17	+	3480	25	FSM	ENSG00000073350.14	ENST00000167462.9	3480	25	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_23	86.535307100628	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGTCCACTACTTTAATA	75523633	True	NA	9	True	AATAAA	-17	NA	75525725	75575208	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75525826_75543396_75543502_75556045_75556144_75558154_75558237_75558511_75558628_75559251_75559411_75563015_75563179_75563330_75563464_75563751_75563807_75564352_75564508_75568475_75568694_75568771_75568840_75568977_75569132_75569220_75569326_75569962_75570256_75570347_75570499_75570949_75571101_75571666_75571784_75571897_75572065_75573013_75573279_75573480_75573632_75573951_75573981_75574212_75574261_75574609_75574669_75574870
transcript_91084.known	chr17	+	3553	26	FSM	ENSG00000073350.14	ENST00000392550.8	3553	26	0	0	0	0	multi-exon	TRUE	canonical	3	251	junction_25	76.6549254777539	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTCCACTACTTTAATAT	75523604	True	NA	10	True	AATAAA	-18	NA	75525696	75575209	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75525826_75543396_75543502_75556045_75556144_75558154_75558237_75558511_75558628_75559251_75559411_75563015_75563179_75563330_75563464_75563751_75563807_75564352_75564508_75568475_75568694_75568771_75568840_75568977_75569132_75569220_75569326_75569962_75570256_75570347_75570499_75570949_75571101_75571666_75571784_75571897_75572065_75573013_75573279_75573480_75573632_75573951_75573981_75574212_75574261_75574452_75574496_75574609_75574669_75574870
transcript_91087.nnic	chr17	-	3347	20	NNC	ENSG00000108469.15	novel	3669	20	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	35.3164561863493	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTTTCTCCAGGGAGTT	-75664710	True	NA	-18	True	AATAAA	-36	NA	75667197	75626853	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_75627523_75627622_75627693_75628217_75628443_75628671_75628763_75628933_75629111_75629707_75629843_75630183_75630278_75630618_75630693_75630778_75630838_75630973_75631011_75631149_75631250_75631449_75631669_75651185_75651266_75658297_75658461_75660954_75661067_75661605_75661709_75662478_75662998_75665050_75665173_75666427_75666572_75667043
transcript_91090.known	chr17	-	3669	20	FSM	ENSG00000108469.15	ENST00000317905.10	3669	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	28.7951981223093	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTTTCTCCAGGGAGTT	-75664667	True	NA	-18	True	AATAAA	-36	NA	75667154	75626853	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75627523_75627622_75627693_75628217_75628443_75628671_75628763_75628933_75629476_75629707_75629843_75630183_75630278_75630618_75630693_75630778_75630838_75630973_75631011_75631149_75631250_75631449_75631669_75651185_75651266_75658297_75658461_75660954_75661067_75661605_75661709_75662478_75662998_75665050_75665173_75666427_75666572_75667043
transcript_91096.nic	chr17	-	3775	20	NIC	ENSG00000108469.15	novel	3669	20	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	35.1630944783931	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTTTCTCCAGGGAGTT	-75664710	True	NA	-18	True	AATAAA	-36	NA	75667197	75626853	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_75627523_75627622_75627693_75628217_75628443_75628671_75628826_75628933_75629476_75629707_75629843_75630183_75630278_75630618_75630693_75630778_75630838_75630973_75631011_75631149_75631250_75631449_75631669_75651185_75651266_75658297_75658461_75660954_75661067_75661605_75661709_75662478_75662998_75665050_75665173_75666427_75666572_75667043
transcript_91099.nic	chr17	-	4174	19	ISM	ENSG00000108469.15	ENST00000317905.10	3669	20	-33	0	2	0	intron_retention	FALSE	canonical	3	76	junction_5	14.5737799396174	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTTTCTCCAGGGAGTT	-75664700	True	NA	-18	True	AATAAA	-36	NA	75667187	75626853	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_75627523_75627622_75627693_75628217_75628443_75628671_75628763_75628933_75629476_75629707_75629843_75630183_75630278_75630618_75630693_75630778_75630838_75630973_75631011_75631149_75631250_75631449_75631669_75651185_75651266_75658297_75658461_75660954_75661067_75661605_75661709_75662478_75662998_75665050_75665173_75666427
transcript_91102.nic	chr17	-	3944	19	NIC	ENSG00000108469.15	novel	3669	20	NA	NA	-8	0	intron_retention	FALSE	canonical	0	0	junction_18	28.6589136802729	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTTTCTCCAGGGAGTT	-75664710	True	NA	-18	True	AATAAA	-36	NA	75667197	75626853	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_75627523_75627622_75627693_75628217_75628443_75628671_75628763_75628933_75629843_75630183_75630278_75630618_75630693_75630778_75630838_75630973_75631011_75631149_75631250_75631449_75631669_75651185_75651266_75658297_75658461_75660954_75661067_75661605_75661709_75662478_75662998_75665050_75665173_75666427_75666572_75667043
transcript_9112.nic	chr1	-	2129	8	ISM	ENSG00000159658.15	ENST00000484461.2	2573	9	-17	2642	-10	-2642	5prime_fragment	FALSE	canonical	3	164	junction_1	49.3376537913251	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCAAAGCATAAAGGTAAAT	-46715654	True	NA	NA	False	AGTAAA	-3	NA	46719156	46686797	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_46686871_46688352_46688545_46689586_46689692_46691826_46691938_46696550_46696650_46707905_46708052_46716294_46716444_46717902
transcript_91123.known	chr17	-	1749	9	FSM	ENSG00000108469.15	ENST00000340830.9	1749	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	50.3506454774911	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGCTGTGTGTTTTTAT	-75664702	True	NA	6	True	AAAAAG	-21	NA	75667189	75650358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75650719_75651185_75651266_75658297_75658461_75660954_75661067_75661605_75661709_75662478_75662998_75665050_75665173_75666427_75666572_75667043
transcript_91126.known	chr17	-	3710	8	FSM	ENSG00000108469.15	ENST00000420326.6	3710	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	41.6952011137777	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAACCAAAAAA	-75664702	True	NA	NA	False	ACTAAA	-6	NA	75667189	75648864	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75651266_75658297_75658461_75660954_75661067_75661605_75661709_75662478_75662998_75665050_75665173_75666427_75666572_75667043
transcript_9113.nic	chr1	-	1943	7	ISM	ENSG00000159658.15	ENST00000674435.1	5641	10	-20	11627	-10	-2636	5prime_fragment	FALSE	canonical	3	101	junction_1	67.8415228471636	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATAAAGGTAAATAATGGG	-46715654	True	NA	NA	False	AGTAAA	-9	NA	46719156	46686791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_46686871_46689586_46689692_46691826_46691938_46696550_46696650_46707905_46708052_46716294_46716444_46717902
transcript_91136.known	chr17	-	3576	20	FSM	ENSG00000108469.15	ENST00000423245.6	3576	20	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_18	36.5237372061155	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTTTCTCCAGGGAGTT	-75664655	True	NA	-18	True	AATAAA	-36	NA	75667142	75626853	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75627523_75627622_75627693_75628217_75628443_75628671_75628763_75628933_75629476_75629707_75629843_75630183_75630278_75630618_75630693_75630778_75630838_75630973_75631011_75631149_75631250_75631449_75631669_75651185_75651266_75658297_75658461_75660954_75661067_75661605_75661709_75662478_75662998_75665050_75665092_75666427_75666572_75667043
transcript_9114.known	chr1	-	4120	4	FSM	ENSG00000159658.15	ENST00000674302.1	4120	4	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_3	11.5566238822398	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTATAAGGTGTAAGGAAG	-46715644	True	NA	NA	False	NA	NA	NA	46719146	46694068	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_46696650_46707905_46708052_46716294_46716444_46717902
transcript_91141.known	chr17	+	1000	12	FSM	ENSG00000161526.15	ENST00000583536.5	1000	12	0	0	0	0	multi-exon	FALSE	canonical	2	59	junction_3	262.816845378823	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGACCGTGCAGCCCAGT	75655969	True	NA	NA	False	NA	NA	NA	75667425	75706545	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75667479_75668515_75668626_75671815_75671864_75690670_75690773_75693439_75693483_75699782_75699872_75702479_75702572_75703310_75703372_75703807_75703860_75704755_75704815_75706007_75706093_75706339
transcript_91145.nnic	chr17	+	2476	12	NNC	ENSG00000161526.15	novel	1000	12	NA	NA	22	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	217.82577009092	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGCCAGTGTTTTTTG	NA	False	NA	13	True	TATAAA	-8	NA	75667272	75708049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_75667479_75668515_75668626_75671815_75671864_75693439_75693483_75699782_75699872_75702479_75702572_75703310_75703372_75703807_75703860_75704755_75704815_75706007_75706093_75706339_75707129_75707207
transcript_91149.known	chr17	+	1558	11	FSM	ENSG00000161526.15	ENST00000580322.5	1558	11	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_9	225.682542523785	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTTGGCATCTCAGATG	75655917	True	NA	14	True	ATTAAA	-15	NA	75667373	75706756	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75667479_75668515_75668626_75671815_75671864_75693439_75693483_75699782_75699872_75702479_75702572_75703310_75703372_75703807_75703860_75704755_75704815_75705610_75706093_75706339
transcript_91150.known	chr17	+	2500	11	FSM	ENSG00000161526.15	ENST00000584667.6	2500	11	0	0	0	0	multi-exon	FALSE	canonical	3	701	junction_9	35.5084496986281	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTTTGTTGGCTAAAT	75655881	True	NA	23	True	TATAAA	-18	NA	75667337	75708059	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75667479_75668515_75668626_75671815_75671864_75693439_75693483_75699782_75699872_75702479_75702572_75703310_75703372_75703807_75703860_75704755_75704815_75706007_75706093_75706339
transcript_91158.known	chr17	+	2409	10	FSM	ENSG00000161526.15	ENST00000582022.5	2409	10	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_6	214.504827422728	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTGTTGGCTAAATCCA	75655914	True	NA	26	True	TATAAA	-21	NA	75667370	75708062	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75667479_75668515_75668626_75671815_75671864_75693439_75693483_75699782_75699872_75702479_75702572_75703807_75703860_75704755_75704815_75706007_75706093_75706339
transcript_91162.known	chr17	+	2439	10	FSM	ENSG00000161526.15	ENST00000355423.7	2439	10	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_2	188.661039047072	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCAGTGTTTTTTGTTGGC	75655889	True	NA	18	True	TATAAA	-13	NA	75667345	75708054	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75667479_75668515_75668626_75693439_75693483_75699782_75699872_75702479_75702572_75703310_75703372_75703807_75703860_75704755_75704815_75706007_75706093_75706339
transcript_91169.known	chr17	+	1011	9	FSM	ENSG00000161526.15	ENST00000542343.5	1011	9	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_6	241.118228261573	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCTGTCCACGCACCACC	75655899	True	NA	-41	True	NA	NA	NA	75667355	75706701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75667479_75668515_75668626_75671815_75671864_75693439_75693483_75699782_75699872_75702479_75702572_75704755_75704815_75706007_75706093_75706339
transcript_9117.known	chr1	+	2256	12	FSM	ENSG00000186377.8	ENST00000371901.4	2256	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_11	1.92847303959967	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGCTTTATGGTATTCT	47023596	True	NA	4	True	AATAAA	-19	NA	47023668	47050751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_47023995_47029989_47030132_47031435_47031481_47033240_47033369_47035805_47035934_47036016_47036172_47038659_47038767_47039341_47039533_47046466_47046601_47048564_47048630_47049421_47049505_47049999
transcript_91178.known	chr17	+	1097	6	FSM	ENSG00000161526.15	ENST00000577292.5	1097	6	0	0	0	0	multi-exon	FALSE	canonical	3	712	junction_4	25.9121593079388	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTGGAGGGCCATCAGG	75655894	True	NA	NA	False	NA	NA	NA	75667350	75703158	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75667479_75668515_75668626_75671815_75671864_75693439_75693483_75699782_75699872_75702479
transcript_91180.known	chr17	+	5554	39	FSM	ENSG00000132470.14	ENST00000579662.5	5554	39	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_1	5.81007101572401	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCCCGGAGCCTCCTCA	75721283	False	NA	NA	False	NA	NA	NA	75721327	75757604	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75721564_75724693_75724783_75727194_75727278_75727403_75727506_75727650_75727856_75728376_75728474_75729264_75729437_75730240_75730505_75730874_75730965_75731245_75731369_75731811_75731974_75732162_75732240_75733489_75733693_75736050_75736155_75736287_75736387_75736564_75736695_75737321_75737445_75737537_75737645_75739671_75739706_75739879_75740072_75740357_75740462_75740792_75740852_75740981_75741006_75742340_75742490_75742581_75742762_75743712_75743862_75748840_75749046_75750110_75750269_75750679_75750861_75750973_75751112_75752173_75752357_75752445_75752578_75754575_75754816_75755700_75755851_75756428_75756618_75756703_75756860_75756942_75757108_75757199_75757311_75757415
transcript_91181.known	chr17	+	5645	39	FSM	ENSG00000132470.14	ENST00000450894.7	5645	39	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	5.70858565132417	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGGCCCTGCCTTGCCCAT	75721080	True	NA	8	True	AATAAA	-15	NA	75721496	75757815	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75721613_75724693_75724783_75727194_75727278_75727403_75727506_75727650_75727856_75728376_75728474_75729264_75729437_75730240_75730505_75730874_75730965_75731245_75731369_75731811_75731974_75732162_75732240_75733489_75733693_75736050_75736155_75736287_75736387_75736564_75736695_75737321_75737445_75737537_75737645_75739671_75739706_75739879_75740072_75740357_75740462_75740792_75740852_75740981_75741006_75742340_75742490_75742581_75742762_75743712_75743862_75748840_75749046_75750110_75750269_75750679_75750861_75750973_75751112_75752173_75752357_75752445_75752578_75754575_75754816_75755700_75755851_75756428_75756618_75756703_75756860_75756942_75757108_75757199_75757311_75757415
transcript_91182.known	chr17	+	5896	40	FSM	ENSG00000132470.14	ENST00000200181.8	5896	40	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_32	6.66923027632368	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTGCCTTGCCCATTCT	75721042	True	NA	11	True	AATAAA	-18	NA	75721458	75757818	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75721613_75724693_75724783_75727194_75727278_75727403_75727506_75727650_75727856_75728376_75728474_75729264_75729437_75730240_75730505_75730874_75730965_75731245_75731369_75731811_75731974_75732162_75732240_75733489_75733693_75736050_75736155_75736287_75736387_75736564_75736695_75737321_75737445_75737537_75737645_75739671_75739706_75739879_75740072_75740357_75740462_75740792_75740852_75740981_75741006_75742340_75742490_75742581_75742762_75743712_75743862_75748840_75749046_75750110_75750269_75750679_75750861_75750973_75751112_75752173_75752357_75752445_75752578_75753764_75753975_75754575_75754816_75755700_75755851_75756428_75756618_75756703_75756860_75756942_75757108_75757199_75757311_75757415
transcript_91184.known	chr17	-	1251	8	FSM	ENSG00000108479.13	ENST00000592997.6	1251	8	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_4	105.163623725612	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGGATGTCAGAACCGCT	-75764990	False	NA	30	True	NA	NA	NA	75765136	75757893	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75758128_75758209_75758373_75758448_75758600_75762703_75762796_75763013_75763150_75763319_75763440_75763896_75764087_75764971
transcript_91185.known	chr17	-	1397	8	FSM	ENSG00000108479.13	ENST00000588479.6	1397	8	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_2	33.2430750806288	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGGATGTCAGAACCGCT	-75762885	True	NA	30	True	NA	NA	NA	75765192	75757893	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75758128_75758209_75758373_75758448_75758600_75762703_75762886_75763013_75763150_75763319_75763440_75763896_75764087_75764971
transcript_91192.known	chr17	+	1312	4	FSM	ENSG00000132478.10	ENST00000586527.1	1312	4	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	2.62466929133727	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTGTTTTTATTTCAG	75782199	True	NA	14	True	ATTAAA	-27	NA	75784854	75794198	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75784985_75791759_75792020_75792312_75792479_75793442
transcript_91194.known	chr17	+	633	4	FSM	ENSG00000132478.10	ENST00000592629.1	633	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	31.3723161756065	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGCTGGGGTCCAGGGCA	75782206	True	NA	NA	False	NA	NA	NA	75784861	75812319	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75784985_75808947_75809040_75809759_75809970_75812111
transcript_91195.known	chr17	-	576	4	FSM	ENSG00000132475.10	ENST00000589599.5	576	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	7625.40547555779	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTAGTAAATTCTGTAA	-75701979	True	NA	-33	True	NA	NA	NA	75779780	75778573	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75778724_75778809_75778964_75779046_75779185_75779646
transcript_9120.nic	chr1	-	4893	18	NIC	ENSG00000123473.17	novel	5225	18	NA	NA	-18	0	intron_retention	FALSE	canonical	3	37	junction_12	22.8762278207741	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTGTCTGTTATAGTT	-47311514	True	NA	0	True	AATAAA	-22	NA	47314165	47250138	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_47251923_47260288_47260540_47262902_47263114_47269634_47269867_47272075_47272242_47280240_47281210_47282344_47282460_47287550_47287661_47289434_47289586_47293457_47293545_47295764_47295849_47299904_47299969_47300109_47300153_47301560_47301749_47302233_47302347_47304888_47304997_47310275_47310363_47314035
transcript_91204.known	chr17	-	575	3	FSM	ENSG00000132475.10	ENST00000589417.1	575	3	0	0	0	0	multi-exon	FALSE	canonical	3	13885	junction_2	1252.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGCCCAAAGACATCCAGT	-75701978	True	NA	-106	True	NA	NA	NA	75779779	75778646	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75778724_75778809_75779185_75779656
transcript_91205.known	chr17	-	586	3	FSM	ENSG00000132475.10	ENST00000587171.1	586	3	0	0	0	0	multi-exon	FALSE	canonical	3	13885	junction_2	1034	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATCCAGTTGGCTCGCC	-75701977	True	NA	-97	True	NA	NA	NA	75779778	75778637	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75778964_75779046_75779185_75779656
transcript_9121.known	chr1	-	5019	17	FSM	ENSG00000123473.17	ENST00000371877.8	5019	17	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_3	21.8059624873565	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTGTCTGTTATAGTT	-47311496	True	NA	0	True	AATAAA	-22	NA	47314147	47250138	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_47251923_47260288_47260540_47262902_47263117_47269634_47269867_47272075_47272242_47280240_47281210_47282344_47282460_47287550_47287661_47289434_47289586_47293457_47293545_47295764_47295849_47299904_47300153_47301560_47301749_47302233_47302347_47304888_47304997_47310275_47310363_47314035
transcript_91210.known	chr17	-	842	2	FSM	ENSG00000132475.10	ENST00000589949.1	842	2	0	0	0	0	multi-exon	FALSE	canonical	3	13885	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGACTGTTCACAGACCT	-75701965	True	NA	35	True	NA	NA	NA	75779766	75778452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75779185_75779656
transcript_91212.known	chr17	-	1701	1	FSM	ENSG00000132475.10	ENST00000586518.1	1701	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATATATTGTAGTATCA	-75701971	True	NA	-56	True	AGTAAA	-43	NA	75779772	75778071	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75778100_75779800
transcript_91214.nic	chr17	-	1784	9	NIC	ENSG00000092929.12	novel	4080	32	NA	NA	-61	0	intron_retention	FALSE	canonical	3	15	junction_8	19.4482486358027	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTTTGGCCTACAGTG	NA	False	NA	-1	True	AATAAA	-25	NA	75833330	75827224	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_75828087_75828786_75828984_75830027_75830152_75830361_75830483_75830577_75830662_75831097_75831170_75831242_75831349_75832965_75833046_75833192
transcript_91220.known	chr17	-	1895	8	FSM	ENSG00000132471.12	ENST00000585462.5	1895	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_7	153.254623394652	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAACTGGACCCTTTCTGG	-75846661	True	NA	-16	True	AGTAAA	-6	NA	75855322	75845708	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75846788_75846907_75846985_75847486_75847610_75847795_75847931_75848569_75848663_75849603_75849740_75851567_75851677_75855179
transcript_91221.known	chr17	-	1745	8	FSM	ENSG00000132471.12	ENST00000590221.5	1745	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	165.944790425574	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGAAATAAACCCTGTTT	-75846645	True	NA	-40	True	AATATA	-4	NA	75855306	75845771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75846788_75846907_75846985_75847486_75847598_75847795_75847931_75848569_75848663_75849603_75849740_75851567_75851677_75855238
transcript_91224.nic	chr17	-	2486	7	NIC	ENSG00000132471.12	novel	2225	9	NA	NA	-31	0	intron_retention	FALSE	canonical	3	394	junction_1	49.9121450372775	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTTTGCTGAAAATGTG	-75846707	True	NA	-12	True	AATAAA	-17	NA	75855368	75845743	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_75846788_75846907_75846985_75847486_75847610_75847795_75848663_75849603_75849740_75851567_75851677_75855238
transcript_91225.known	chr17	-	928	7	FSM	ENSG00000132471.12	ENST00000433525.6	928	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	176.457501965771	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCTCTTCTGGGAGCACG	-75846674	True	NA	NA	False	NA	NA	NA	75855335	75846494	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75846788_75846907_75846985_75847486_75847610_75848569_75848663_75849603_75849740_75851567_75851677_75855238
transcript_91234.nnic	chr17	-	2550	6	NNC	ENSG00000132481.7	novel	2269	6	NA	NA	-128	0	intron_retention	FALSE	canonical	1	3	junction_5	11.6378692207809	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCCTTTTCCATCCTCT	-75878687	True	NA	NA	False	AATAAA	-16	NA	75878709	75874163	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_75875124_75875399_75875475_75875900_75876100_75876261_75876493_75876717_75876814_75877720
transcript_91235.known	chr17	-	1907	6	FSM	ENSG00000132481.7	ENST00000587339.2	1907	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	7.49933330370107	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCCTTTTCCATCCTCT	-75878174	False	NA	NA	False	AATAAA	-16	NA	75878196	75874163	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75875124_75875399_75875475_75875900_75876100_75876261_75876493_75876717_75876814_75877850
transcript_91236.known	chr17	-	2269	6	FSM	ENSG00000132481.7	ENST00000254816.6	2269	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	3.16227766016838	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCCTTTTCCATCCTCT	-75878420	True	NA	NA	False	AATAAA	-16	NA	75878581	75874163	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75875124_75875399_75875475_75875900_75876100_75876261_75876493_75876717_75876814_75877873
transcript_91238.nic	chr17	-	2031	7	NIC	ENSG00000141569.12	novel	3384	6	NA	NA	-63	603	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	79.1012010022604	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGAAATATGTCTGTTCTC	-75896637	False	NA	-8	True	AATAAA	-30	NA	75897014	75879731	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_75880630_75891276_75891348_75891812_75891879_75892010_75892186_75892266_75892501_75892754_75892851_75896523
transcript_91242.nnic	chr17	-	2780	7	NNC	ENSG00000141569.12	novel	3384	6	NA	NA	-63	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	81.683161599493	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAATACGTGTAATATACA	-75896637	False	NA	-5	True	AATAAA	-13	NA	75897014	75888964	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_75889187_75889851_75891348_75891812_75891879_75892010_75892186_75892266_75892501_75892754_75892851_75896523
transcript_91243.known	chr17	-	3384	6	FSM	ENSG00000141569.12	ENST00000269383.8	3384	6	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	12.5857061780418	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATACGTGTAATATACATA	-75896574	False	11358	-3	True	AATAAA	-15	NA	75896951	75888962	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75891348_75891812_75891879_75892010_75892186_75892266_75892501_75892754_75892851_75896523
transcript_91249.known	chr17	-	865	5	FSM	ENSG00000141569.12	ENST00000543309.5	865	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	88.933964265628	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGAAGCCCAGCGCCTCC	-75896181	False	NA	NA	False	GGGGCT	-37	NA	75896558	75891022	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75891348_75892010_75892186_75892266_75892501_75892754_75892851_75896523
transcript_9125.known	chr1	-	5351	19	FSM	ENSG00000123473.17	ENST00000337817.10	5351	19	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_18	31.8158765398661	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACTTAATAAAATGTCTA	-47314882	True	NA	-34	True	TATAAA	-38	NA	47314892	47250172	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_47251923_47260288_47260540_47262902_47263117_47269634_47269867_47272075_47272242_47280240_47281210_47282344_47282460_47287550_47287661_47289434_47289586_47293457_47293545_47295764_47295849_47299904_47299969_47300109_47300153_47301560_47301749_47302233_47302347_47304888_47304997_47310275_47310363_47314035_47314564_47314801
transcript_91270.known	chr17	-	1358	9	FSM	ENSG00000204316.13	ENST00000309352.4	1358	9	0	0	0	0	multi-exon	FALSE	canonical	3	1065	junction_1	59.9979166304964	1207	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGGCTCACACCTGTA	-75893526	True	NA	-3	True	AATAAA	-18	NA	75904884	75898643	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75898987_75899157_75899295_75899515_75899675_75900981_75901028_75901200_75901274_75901711_75901921_75902019_75902155_75904539_75904720_75904808
transcript_9130.nic	chr1	-	3109	16	NIC	ENSG00000123473.17	novel	5225	18	NA	NA	-18	0	intron_retention	FALSE	canonical	3	50	junction_2	17.2696265159383	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAAACACATCATT	-47311514	True	NA	NA	False	NA	NA	NA	47314165	47260429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_47260540_47262902_47263114_47269634_47269867_47272075_47272242_47280240_47281210_47282344_47282460_47287550_47287661_47289434_47289586_47293457_47293545_47295764_47295849_47299904_47300153_47301560_47301749_47302233_47302347_47304888_47304997_47310275_47310363_47314035
transcript_91304.known	chr17	-	7317	14	FSM	ENSG00000161533.12	ENST00000293217.10	7317	14	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_12	26.8398714271297	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACTTAATCTTTTTGTG	-75976100	True	NA	0	True	AATAAA	-39	NA	75979166	75941506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75946796_75948250_75948458_75949216_75949361_75949494_75949601_75949717_75949898_75950773_75950965_75951414_75951578_75953450_75953621_75955565_75955682_75955827_75955948_75957458_75957567_75960214_75960376_75978533_75978694_75978964
transcript_91305.known	chr17	-	2215	14	FSM	ENSG00000161533.12	ENST00000301608.8	2215	14	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_11	22.1736023021352	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTTAAGTGCAATTAACA	-75976068	True	NA	NA	False	ATTAAA	-15	NA	75979134	75946576	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75946796_75948250_75948458_75949216_75949361_75949494_75949601_75949717_75949898_75950773_75950965_75951414_75951578_75953450_75953621_75955565_75955682_75955827_75955948_75957458_75957567_75973624_75973786_75978533_75978694_75978964
transcript_91318.known	chr17	-	308	2	FSM	ENSG00000161533.12	ENST00000592329.1	308	2	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCATCACCGTGCTTGGT	-75979020	False	NA	NA	False	NA	NA	NA	75979045	75978466	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_75978694_75978964
transcript_91320.known	chr17	+	2259	11	FSM	ENSG00000261408.7	ENST00000649294.1	2259	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	82.9241219428943	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTATGTTCCTGAGTTTTCT	75976668	True	NA	5	True	AATAAA	-8	NA	75979251	76005985	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75979512_75986186_75986285_75991465_75991624_76000140_76000390_76001411_76001542_76001873_76001952_76002021_76002143_76002247_76002419_76002510_76002613_76003194_76003399_76005297
transcript_91322.nnic	chr17	+	2389	11	NNC	ENSG00000261408.7	novel	2259	11	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_4	80.5099372748483	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTGATTGTTCTGCTC	75976651	True	NA	18	True	AATAAA	-21	NA	75979234	76005998	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_75979512_75986186_75986285_75991465_75991624_76000140_76000490_76001411_76001542_76001873_76001952_76002021_76002143_76002247_76002419_76002510_76002613_76003194_76003399_76005297
transcript_91333.nnic	chr17	+	2724	10	NNC	ENSG00000261408.7	novel	2259	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	18	junction_4	80.7269441151642	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTGATTGTTCTGCTC	75976648	True	NA	18	True	AATAAA	-21	NA	75979231	76005998	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_75979512_75986186_75986285_75991465_75991624_76000140_76000490_76001411_76001952_76002021_76002143_76002247_76002419_76002510_76002613_76003194_76003399_76005297
transcript_91338.known	chr17	+	3287	10	FSM	ENSG00000261408.7	ENST00000569284.1	3287	10	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	77.0076154643563	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGATTGTTCTGCTCA	75976676	True	NA	19	True	AATAAA	-22	NA	75979259	76005999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75979512_75986186_75986285_75991465_75991624_76000140_76001542_76001873_76001952_76002021_76002143_76002247_76002419_76002510_76002613_76003194_76003399_76005297
transcript_91342.known	chr17	+	3897	9	FSM	ENSG00000261408.7	ENST00000567351.5	3897	9	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	79.5172937165243	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTGATTGTTCTGCTC	75976647	True	NA	18	True	AATAAA	-21	NA	75979230	76005998	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75979512_75986186_75986285_75991465_75991624_76000140_76001542_76001873_76001952_76002021_76002143_76002247_76002419_76002510_76003399_76005297
transcript_91343.nic	chr17	+	4103	9	NIC	ENSG00000261408.7	novel	3287	10	NA	NA	-456	0	intron_retention	FALSE	canonical	3	79	junction_4	75.0782924685957	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTGATTGTTCTGCTC	NA	False	NA	18	True	AATAAA	-21	NA	75978774	76005998	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_75979512_75986186_75986285_75991465_75991624_76000140_76001952_76002021_76002143_76002247_76002419_76002510_76002613_76003194_76003399_76005297
transcript_91356.known	chr17	+	974	4	FSM	ENSG00000257949.7	ENST00000397640.6	974	4	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_3	3.29983164553722	173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCTCGTGGTGCAGCGC	75976656	True	NA	11	True	AATAAA	-24	NA	75979239	76000586	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_75979512_75986186_75986285_75991465_75991624_76000140
transcript_9136.known	chr1	+	2937	6	FSM	ENSG00000162368.14	ENST00000371873.10	2937	6	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_5	31.9274176844918	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGGTTTAGATTTCTG	47328781	True	NA	29	True	AATAAA	-23	NA	47333789	47378839	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_47334117_47368468_47368616_47372954_47373108_47374908_47374986_47375196_47375294_47376703
transcript_91361.known	chr17	-	2124	20	FSM	ENSG00000182473.22	ENST00000634349.1	2124	20	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_13	214.956866123483	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCTGCTAGCCCTGCCT	-76091272	True	NA	-97	True	NA	NA	NA	76103692	76083647	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76083751_76084005_76084140_76084247_76084290_76084516_76084581_76085313_76085410_76085676_76085798_76086079_76086146_76087653_76087721_76088059_76088123_76088463_76088563_76088770_76088924_76089174_76089321_76090328_76090398_76091142_76091236_76094413_76094582_76097795_76098019_76101270_76101377_76101678_76101864_76103360_76103427_76103632
transcript_91369.known	chr17	-	2031	19	FSM	ENSG00000182473.22	ENST00000411744.6	2031	19	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_13	194.458380452978	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCTGCTAGCCCTGCCT	-76091272	True	NA	-97	True	NA	NA	NA	76103692	76083647	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76083751_76084005_76084140_76084247_76084290_76084516_76084581_76085313_76085410_76085676_76085798_76086079_76086146_76087653_76087721_76088059_76088123_76088463_76088563_76088770_76088924_76089174_76089321_76090328_76090398_76094413_76094582_76097795_76098019_76101270_76101377_76101678_76101864_76103360_76103427_76103632
transcript_91371.known	chr17	-	4782	19	FSM	ENSG00000182473.22	ENST00000589210.6	4782	19	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_12	184.396981845095	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGGAGGGAGAAGTGGTC	-76091367	True	NA	-35	True	AATAAA	-20	NA	76103787	76081015	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76083751_76084005_76084140_76084247_76084290_76084516_76084581_76085313_76085410_76085676_76085798_76086079_76086146_76087653_76087721_76088059_76088123_76088463_76088563_76088770_76088924_76089174_76089321_76091142_76091236_76094413_76094582_76097795_76098019_76101270_76101377_76101678_76101864_76103360_76103427_76103632
transcript_91386.known	chr17	-	4596	18	FSM	ENSG00000182473.22	ENST00000332065.9	4596	18	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_12	61.2463966880211	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATGGAGGGAGAAGTGGT	-76091275	True	NA	-36	True	AATAAA	-19	NA	76103695	76081016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76083751_76084005_76084140_76084247_76084290_76084516_76084581_76085313_76085410_76085676_76085798_76086079_76086146_76087653_76087721_76088059_76088123_76088463_76088563_76088770_76088924_76089174_76089321_76094413_76094582_76097795_76098019_76101270_76101377_76101678_76101864_76103360_76103427_76103632
transcript_9139.known	chr1	+	1212	5	FSM	ENSG00000162368.14	ENST00000371871.8	1212	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	162.191245139804	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAACAAACTCAAAATGGA	47328800	True	NA	NA	False	NA	NA	NA	47333808	47377210	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_47334117_47368468_47368616_47372954_47373108_47375196_47375294_47376703
transcript_91413.known	chr17	-	2831	16	FSM	ENSG00000167881.15	ENST00000307877.7	2831	16	0	0	0	0	multi-exon	FALSE	canonical	3	839	junction_9	85.4119429588158	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGACACTTAACGATTCCC	-76060789	True	NA	-6	True	AATAAA	-18	NA	76072517	76038784	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76039934_76040418_76040475_76040902_76040979_76043828_76043959_76045291_76045387_76046037_76046195_76047905_76047971_76050427_76050527_76057402_76057544_76060307_76060391_76061109_76061220_76061491_76061575_76063975_76064172_76067216_76067331_76070377_76070445_76072307
transcript_91419.known	chr17	-	1941	15	FSM	ENSG00000167881.15	ENST00000592704.5	1941	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	249.61031874602	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTCTTAAGCAGCGTGTC	-76060769	True	NA	14	True	NA	NA	NA	76072497	76039550	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76039934_76040418_76040475_76040902_76040979_76043828_76043959_76045291_76045387_76046037_76046195_76047905_76047971_76050427_76050527_76057402_76057544_76060307_76060391_76061109_76061220_76061491_76061575_76063975_76064172_76067216_76067331_76072344
transcript_9142.nnic	chr1	-	3515	8	NIC	ENSG00000269113.4	novel	7524	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	8.03309481114831	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTAGTGTTTCTGTGTG	-47997215	True	NA	0	True	AATAAA	-18	NA	47997385	47760527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_47761281_47765289_47766107_47775169_47775440_47778453_47778545_47794585_47794761_47801472_47801620_47994033_47994598_47996687
transcript_91420.known	chr17	-	2386	15	FSM	ENSG00000167881.15	ENST00000539137.5	2386	15	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_13	247.92264470012	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGTGCCCATTTCTTAT	-76060779	True	NA	-3	True	ATTAAA	-16	NA	76072507	76039105	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76039934_76040418_76040475_76040902_76040979_76043828_76043959_76045291_76045387_76046037_76046195_76047905_76047971_76050427_76050527_76057402_76057544_76060307_76060391_76061109_76061220_76061491_76061575_76063975_76064172_76070377_76070445_76072307
transcript_91427.known	chr17	-	2958	6	FSM	ENSG00000182473.22	ENST00000405068.3	2958	6	0	0	0	0	multi-exon	FALSE	canonical	3	583	junction_1	63.2626271980543	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-76091323	True	NA	NA	False	NA	NA	NA	76103743	76092314	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76094582_76097795_76098019_76101270_76101377_76101678_76101864_76103360_76103427_76103632
transcript_91434.known	chr17	-	718	4	FSM	ENSG00000182473.22	ENST00000406660.4	718	4	0	0	0	0	multi-exon	FALSE	canonical	3	693	junction_1	20.7257220756131	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTGTTGTTGTTGTTG	-76091314	True	NA	NA	False	ATTAAA	-37	NA	76103734	76101011	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76101377_76101678_76101864_76103360_76103427_76103632
transcript_91435.known	chr17	+	1373	2	FSM	ENSG00000182687.4	ENST00000329003.4	1373	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACAGCGCTGTTTCGCGT	76074507	True	NA	23	True	AATAAA	-24	NA	76074780	76077537	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_76075252_76076635
transcript_91438.known	chr17	-	2587	3	FSM	ENSG00000129654.8	ENST00000322957.7	2587	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	9.5	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGACCTGCTCAAAACTT	-76141034	True	NA	-4	True	AATAAA	-18	NA	76141245	76136332	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76138121_76139897_76140565_76141113
transcript_91439.known	chr17	+	660	2	FSM	ENSG00000185262.9	ENST00000589240.1	660	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGGAGGGCAGGGGGTTT	76265681	False	NA	-88	True	NA	NA	NA	76265702	76270586	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_76265970_76270193
transcript_91444.known	chr17	-	3435	10	FSM	ENSG00000161542.17	ENST00000446526.8	3435	10	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_1	51.0412566121095	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGTCTCAATTGTTAAC	-76348839	True	NA	NA	False	NA	NA	NA	76353916	76309477	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76311701_76312869_76313017_76313820_76313892_76328716_76328863_76330042_76330099_76330550_76330667_76332262_76332436_76344670_76344738_76348528_76348582_76353533
transcript_91454.nic	chr17	-	1304	9	ISM	ENSG00000161542.17	ENST00000446526.8	3435	10	-15	3315	-15	0	5prime_fragment	FALSE	canonical	3	484	junction_4	38.7233779518265	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGCTTAATCTGTCTAT	-76348854	True	NA	NA	False	AATAAA	-18	NA	76353931	76312792	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_76313017_76313820_76313892_76328716_76328863_76330042_76330099_76330550_76330667_76332262_76332436_76344670_76344738_76348528_76348582_76353533
transcript_91456.nic	chr17	-	2110	8	NIC	ENSG00000161542.17	novel	3435	10	NA	NA	-14	3	intron_retention	FALSE	canonical	3	484	junction_3	40.2933123533939	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTAATCTGTCTATAGC	-76348853	True	NA	NA	False	AATAAA	-21	NA	76353930	76312789	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_76313892_76328716_76328863_76330042_76330099_76330550_76330667_76332262_76332436_76344670_76344738_76348528_76348582_76353533
transcript_91459.known	chr17	+	1816	6	FSM	ENSG00000176170.14	ENST00000592299.6	1816	6	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_5	2.87054001888146	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCTCGTCCTGTCCTGG	76384540	True	NA	2	True	AATAAA	-13	NA	76384608	76387855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_76384807_76385450_76385655_76385984_76386138_76386220_76386316_76386392_76386509_76386805
transcript_91460.known	chr17	+	2138	6	FSM	ENSG00000176170.14	ENST00000323374.8	2138	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	5.17687164221791	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCTCGTCCTGTCCTGG	76384581	True	NA	2	True	AATAAA	-13	NA	76384649	76387855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_76385170_76385450_76385655_76385984_76386138_76386220_76386316_76386392_76386509_76386805
transcript_91465.known	chr17	+	1779	5	FSM	ENSG00000176170.14	ENST00000392496.3	1779	5	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_4	2.8613807855649	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTCGTCCTGTCCTGGTG	76385223	False	NA	4	True	AATAAA	-15	NA	76385291	76387857	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_76385655_76385984_76386138_76386220_76386316_76386392_76386509_76386805
transcript_91466.known	chr17	-	5377	18	FSM	ENSG00000175931.13	ENST00000319380.12	5377	18	0	0	0	0	multi-exon	TRUE	canonical	1	60	junction_3	39.5130393264883	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGCTCCGTTGCCTTTG	-76450655	True	NA	-5	True	ATTAAA	-18	NA	76453152	76389455	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76391614_76391755_76391814_76391909_76392114_76395724_76395862_76396127_76396822_76397798_76397889_76398254_76398384_76398471_76398585_76398836_76398992_76399448_76399922_76400146_76400298_76400440_76400551_76401010_76401155_76402063_76402128_76402601_76402700_76405205_76405317_76405512_76405573_76452724
transcript_91469.nic	chr17	-	5311	18	NIC	ENSG00000175931.13	novel	5377	18	NA	NA	-88	-79	combination_of_known_junctions	FALSE	canonical	1	25	junction_10	55.3063816186782	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTTTTTTTTTTTTTTTT	-76450743	True	NA	-8	True	ATTAAA	-14	NA	76453240	76389534	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_76391614_76391755_76391814_76391909_76392114_76395724_76395862_76396127_76396822_76397798_76397889_76398254_76398384_76398471_76398585_76398836_76398992_76399448_76399922_76400221_76400298_76400440_76400551_76401010_76401155_76402063_76402128_76402601_76402700_76405205_76405317_76405512_76405573_76452724
transcript_9147.known	chr1	-	7524	7	FSM	ENSG00000269113.4	ENST00000606738.3	7524	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	4.6785562825394	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTAGTGTTTCTGTGTG	-47997215	True	NA	0	True	AATAAA	-18	NA	47997385	47760527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_47766107_47775169_47775440_47778453_47778545_47794585_47794761_47801472_47801620_47994033_47994598_47996687
transcript_91472.nic	chr17	-	5049	18	NIC	ENSG00000175931.13	novel	5377	18	NA	NA	-88	0	combination_of_known_junctions	FALSE	canonical	1	25	junction_10	55.3063816186782	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAAAGCATGATGCGTCT	-76450743	True	NA	NA	False	AAAAAG	-11	NA	76453240	76389796	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_76391614_76391755_76391814_76391909_76392114_76395724_76395862_76396127_76396822_76397798_76397889_76398254_76398384_76398471_76398585_76398836_76398992_76399448_76399922_76400221_76400298_76400440_76400551_76401010_76401155_76402063_76402128_76402601_76402700_76405205_76405317_76405512_76405573_76452724
transcript_91475.nic	chr17	-	3422	15	ISM	ENSG00000175931.13	ENST00000319380.12	5377	18	-88	5892	-88	10	5prime_fragment	FALSE	canonical	3	158	junction_7	21.3413701910785	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCCGCCACCATGCGGG	-76450743	True	NA	NA	False	ACTAAA	-24	NA	76453240	76395347	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_76395862_76396127_76396822_76397798_76397889_76398254_76398384_76398471_76398585_76398836_76398992_76399448_76399922_76400146_76400298_76400440_76400551_76401010_76401155_76402063_76402128_76402601_76402700_76405205_76405317_76405512_76405573_76452724
transcript_91478.known	chr17	-	3579	14	FSM	ENSG00000175931.13	ENST00000586409.5	3579	14	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_6	20.7618220404152	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACAAAAAACTCTCCCGCC	-76450644	False	NA	NA	False	ACTAAA	-14	NA	76453141	76395357	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76396822_76397798_76397889_76398254_76398384_76398471_76398585_76398836_76398992_76399448_76399922_76400146_76400298_76400440_76400551_76401010_76401155_76402063_76402128_76402601_76402700_76405205_76405317_76405512_76405573_76452724
transcript_91481.nic	chr17	-	1677	9	ISM	ENSG00000175931.13	ENST00000586409.5	3579	14	-99	4141	-88	290	5prime_fragment	FALSE	canonical	3	158	junction_1	22.1891724721766	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CACAAGAGGAAGAAGAATAA	-76450743	True	NA	-8	True	AAAAAG	-37	NA	76453240	76399498	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_76399922_76400146_76400298_76400440_76400551_76401010_76401155_76402063_76402128_76402601_76402700_76405205_76405317_76405512_76405573_76452724
transcript_91486.nic	chr17	-	3618	20	NIC	ENSG00000129667.13	novel	3511	19	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_19	24.0662750663219	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATTGTCTTTAACGGAG	-76499423	True	NA	-13	True	ATTAAA	-18	NA	76501429	76470895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_76472053_76472685_76472840_76473004_76473106_76473251_76473328_76473647_76473743_76473838_76473903_76474032_76474143_76474372_76474535_76474729_76474805_76475029_76475142_76476829_76477025_76477179_76477299_76477656_76477786_76478805_76479010_76479081_76479278_76479732_76479855_76481374_76481546_76487711_76487852_76487973_76488133_76501352
transcript_9149.nnic	chr1	-	2299	4	NNC	ENSG00000269113.4	novel	7524	7	NA	NA	0	-19553	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.2819751957543	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAAGGCAGCCTCTGTCTT	-47997215	True	NA	NA	False	NA	NA	NA	47997385	47794790	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_47795681_47801472_47801620_47994033_47994598_47996687
transcript_91494.nic	chr17	-	3934	19	NIC	ENSG00000129667.13	novel	3511	19	NA	NA	-6	0	combination_of_known_junctions	TRUE	canonical	2	17	junction_18	20.666143959937	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATTGTCTTTAACGGAG	-76499423	True	NA	-13	True	ATTAAA	-18	NA	76501429	76470895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_76472053_76472685_76472840_76473004_76473106_76473251_76473328_76473647_76473743_76473838_76473903_76474032_76474143_76474372_76474535_76474729_76474805_76475029_76475142_76476829_76477025_76477179_76477299_76477656_76477786_76478805_76479010_76479081_76479278_76479732_76479855_76481374_76481546_76487711_76487910_76500935
transcript_91495.known	chr17	-	3511	19	FSM	ENSG00000129667.13	ENST00000675367.1	3511	19	0	0	0	0	multi-exon	FALSE	canonical	2	33	junction_12	16.7416830282168	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATTGTCTTTAACGGAG	-76499417	True	NA	-13	True	ATTAAA	-18	NA	76501423	76470895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76472053_76472685_76472840_76473004_76473106_76473251_76473328_76473647_76473743_76473838_76473903_76474032_76474143_76474372_76474535_76474729_76474805_76475029_76475142_76476829_76477025_76477179_76477299_76477656_76477786_76478805_76479010_76479081_76479278_76479732_76479855_76481374_76481546_76487711_76487910_76501352
transcript_91500.known	chr17	-	3582	19	FSM	ENSG00000129667.13	ENST00000313080.8	3582	19	0	0	0	0	multi-exon	TRUE	canonical	2	10	junction_16	21.506817753367	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATTGTCTTTAACGGAG	-76499401	True	NA	-13	True	ATTAAA	-18	NA	76501407	76470895	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76472053_76472685_76472840_76473004_76473106_76473251_76473328_76473647_76473743_76473838_76473903_76474032_76474143_76474372_76474535_76474729_76474805_76475029_76475142_76476829_76477025_76477179_76477299_76477656_76477786_76478805_76479010_76479081_76479278_76479732_76479942_76481374_76481546_76487711_76487910_76501352
transcript_91511.known	chr17	+	822	4	FSM	ENSG00000214140.11	ENST00000465808.7	822	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.24721912892465	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGGATGCCGCAGAGCA	76538324	False	NA	NA	False	NA	NA	NA	76538415	76544370	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_76538508_76540504_76540574_76543028_76543122_76543802
transcript_91515.known	chr17	+	989	5	FSM	ENSG00000163597.16	ENST00000586942.7	993	5	3	1	0	-1	multi-exon	FALSE	canonical	3	62	junction_1	710.090487191597	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTGGTGTCTCCGCAGA	76516831	True	NA	9	True	GATAAA	-4	NA	76557768	76563581	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_76557858_76558373_76558601_76558944_76559044_76561287_76561399_76563118
transcript_91519.known	chr17	+	1830	4	FSM	ENSG00000163597.16	ENST00000653677.2	2536	4	0	706	0	-637	multi-exon	FALSE	canonical	3	56	junction_3	290.425358549988	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGAACTGTAAGTCCAAT	76516828	True	NA	-18	True	NA	NA	NA	76557765	76564642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_76557858_76558944_76559044_76561287_76561403_76563118
transcript_91525.known	chr17	+	2620	4	FSM	ENSG00000163597.16	ENST00000587838.2	2620	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	828.516076421507	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACCGTCAGCTGAGTTCA	76516858	True	NA	19	True	AATAAA	-9	NA	76557795	76565338	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_76557858_76558373_76558601_76561287_76561399_76563118
transcript_91526.known	chr17	+	2407	3	FSM	ENSG00000163597.16	ENST00000493536.7	2437	3	3	27	0	-17	multi-exon	FALSE	canonical	3	56	junction_2	569	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAATAAACTTGGGAAACT	76516831	True	NA	2	True	NA	NA	NA	76557768	76565321	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_76557858_76561287_76561403_76563118
transcript_9153.known	chr1	-	5003	13	FSM	ENSG00000132122.12	ENST00000371847.8	5003	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	8.87724932372385	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATTTTGTTTATCCATT	-48471559	True	NA	NA	False	AATATA	-1	NA	48472204	48295372	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_48298894_48305786_48305879_48355669_48355770_48359585_48359771_48385308_48385350_48395266_48395355_48399350_48399645_48403801_48403883_48411463_48411589_48413109_48413152_48451551_48451601_48452993_48453132_48471957
transcript_91530.known	chr17	+	2665	1	FSM	ENSG00000163597.16	ENST00000587743.1	2665	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATCTCATAA	76516831	True	NA	NA	False	AATAAA	-27	NA	76557768	76560433	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_76557800_76560400
transcript_91531.known	chr17	+	3059	6	FSM	ENSG00000163597.16	ENST00000667091.1	3059	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	696.253574497108	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACCGTCAGCTGAGTTCA	76516828	True	NA	19	True	AATAAA	-9	NA	76557765	76565338	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_76557858_76557969_76558280_76558373_76558601_76558944_76559044_76561287_76561399_76563118
transcript_91532.known	chr17	+	1717	1	FSM	ENSG00000261335.1	ENST00000565271.1	1717	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTCTTAGTATAATTAC	76671823	True	NA	4	True	AATAAA	-16	NA	76671941	76673658	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_76671900_76673700
transcript_91533.known	chr17	-	1893	7	FSM	ENSG00000070495.15	ENST00000303996.10	1893	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	76.4671316463631	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGTTTTCCTTTGAGAA	-76726770	False	NA	-24	True	AATAAA	-24	NA	76726784	76718445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76718861_76720359_76720499_76721262_76721352_76721797_76721934_76723771_76724059_76725466_76725856_76726346
transcript_91535.known	chr17	-	1898	7	FSM	ENSG00000070495.15	ENST00000542934.5	1898	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	75.0570153653578	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGTTTTCCTTTGAGAA	-76726770	False	NA	-24	True	AATAAA	-24	NA	76726784	76718445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76718861_76720359_76720499_76721262_76721357_76721797_76721934_76723771_76724059_76725466_76725856_76726346
transcript_91536.known	chr17	-	1621	6	FSM	ENSG00000070495.15	ENST00000397625.9	1621	6	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_3	11.0526015037185	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGAAATGTTTTCCTTT	-76724383	True	NA	-29	True	AATAAA	-19	NA	76726606	76718450	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76718861_76720359_76720499_76721797_76721934_76723771_76724059_76725466_76725856_76726346
transcript_9154.known	chr1	-	2297	13	FSM	ENSG00000132122.12	ENST00000371843.7	2297	13	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	10.4642247682282	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTGGAACCACAATGTGA	-48471965	False	NA	NA	False	TTTAAA	-9	NA	48472010	48297836	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_48298894_48305786_48305879_48355717_48355770_48359585_48359771_48385308_48385350_48395266_48395355_48399350_48399645_48403801_48403883_48411463_48411589_48413109_48413152_48451551_48451601_48452993_48453132_48471957
transcript_91544.known	chr17	+	2850	14	FSM	ENSG00000092931.12	ENST00000621483.4	2850	14	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_1	15.992231842052	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	76736335	True	NA	NA	False	NA	NA	NA	76736564	76779254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_76737092_76738281_76738449_76738937_76738994_76740956_76741065_76741968_76742049_76742176_76742274_76743397_76743457_76744321_76744467_76754046_76754088_76767385_76767452_76769745_76769872_76774996_76775172_76776405_76776542_76778187
transcript_91550.known	chr17	+	2538	14	FSM	ENSG00000092931.12	ENST00000336509.8	2538	14	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	17.1974265310232	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATGATAATTTTTTAAAA	76737108	False	NA	NA	False	AAAAAG	-12	NA	76737700	76779286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_76737884_76738281_76738449_76738937_76738994_76740956_76741065_76741968_76742049_76742176_76742274_76743397_76743457_76744321_76744467_76754046_76754088_76767385_76767452_76769745_76769872_76774996_76775172_76776405_76776542_76778187
transcript_91552.known	chr17	+	1891	14	FSM	ENSG00000092931.12	ENST00000590514.5	1891	14	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	12.5320889893852	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTATGTTTTGCCATGT	76737851	True	NA	16	True	TATAAA	-16	NA	76738070	76778727	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_76738166_76738281_76738449_76738937_76738994_76740956_76741065_76741968_76742049_76742176_76742274_76743397_76743457_76744321_76744467_76754046_76754088_76767385_76767452_76769745_76769872_76774996_76775172_76776405_76776542_76778187
transcript_91558.known	chr17	+	1059	6	FSM	ENSG00000181038.14	ENST00000586738.5	1059	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	81.6519442511934	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTATTACAAGTACTTGGA	76724407	True	NA	NA	False	ATTAAA	-3	NA	76726842	76733866	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_76726880_76726969_76727214_76729689_76729795_76732977_76733216_76733292_76733382_76733520
transcript_91560.known	chr17	+	925	5	FSM	ENSG00000181038.14	ENST00000588302.5	925	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	88.7338013386105	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGATTGTTCCTTAGTCA	76724415	True	NA	NA	False	ATTAAA	-17	NA	76726850	76733880	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_76726880_76726969_76727179_76732977_76733216_76733292_76733382_76733520
transcript_91563.known	chr17	+	1171	5	FSM	ENSG00000181038.14	ENST00000615984.4	1171	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	86.1521183720981	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGATTGTTCCTTAGTC	76724394	True	NA	NA	False	ATTAAA	-16	NA	76726829	76733879	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_76727214_76729689_76729795_76732977_76733216_76733292_76733378_76733520
transcript_91564.known	chr17	+	1184	5	FSM	ENSG00000181038.14	ENST00000588783.5	1184	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	80.7480649922956	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAACCTCAAGAAAAGTGC	76724407	True	NA	NA	False	ATTAAA	-32	NA	76726842	76733936	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_76727179_76729689_76729795_76732977_76733216_76733292_76733382_76733520
transcript_91568.known	chr17	-	1357	5	FSM	ENSG00000161547.17	ENST00000452355.7	1357	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	815.918041227181	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAAGGAAGCAAATGGTT	-76654137	True	NA	-65	True	NA	NA	NA	76737331	76734251	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76734563_76735060_76735159_76735771_76735876_76736153_76736465_76736798
transcript_91569.nic	chr17	+	1089	4	NIC	ENSG00000181038.14	novel	925	5	NA	NA	-18	0	intron_retention	FALSE	canonical	3	10	junction_3	92.4589999224882	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGATTGTTCCTTAGTCA	76724376	True	NA	NA	False	ATTAAA	-17	NA	76726811	76733880	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_76727214_76732977_76733216_76733292_76733382_76733520
transcript_91570.nic	chr17	+	1047	4	NIC	ENSG00000181038.14	novel	925	5	NA	NA	-11	0	intron_retention	FALSE	canonical	3	10	junction_3	92.1315484631742	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGATTGTTCCTTAGTCA	76724383	True	NA	NA	False	ATTAAA	-17	NA	76726818	76733880	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_76727179_76732977_76733216_76733292_76733382_76733520
transcript_91579.known	chr17	-	1359	4	FSM	ENSG00000161547.17	ENST00000585202.5	1359	4	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	831.762385941241	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGAATATGTCTCGGTC	-76736983	False	NA	-12	True	ATTAAA	-23	NA	76737308	76734122	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76734563_76735060_76735159_76736153_76736465_76736798
transcript_91580.nic	chr17	-	2560	4	NIC	ENSG00000161547.17	novel	1357	5	NA	NA	-598	0	intron_retention	FALSE	canonical	3	49	junction_2	895.203639154553	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTTTCTTGGTGTTAG	NA	False	NA	-36	True	NA	NA	NA	76737931	76734146	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_76735159_76735771_76735876_76736153_76736465_76736798
transcript_91585.known	chr17	-	1888	3	FSM	ENSG00000161547.17	ENST00000359995.10	1888	3	0	0	0	0	multi-exon	FALSE	canonical	3	1780	junction_1	96.5	916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTCTCGGTCTTTTTTTC	-76654137	True	NA	-4	True	ATTAAA	-31	NA	76737331	76734114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76735159_76736153_76736465_76736798
transcript_91586.known	chr17	-	1390	3	FSM	ENSG00000161547.17	ENST00000508921.7	1390	3	0	0	0	0	multi-exon	TRUE	canonical	2	343	junction_2	718.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGCACTAGGCGCAG	-76654137	True	NA	NA	False	NA	NA	NA	76737331	76734576	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76735159_76736153_76736465_76736834
transcript_91594.known	chr17	-	2885	2	FSM	ENSG00000161547.17	ENST00000392485.2	2885	2	0	0	0	0	multi-exon	FALSE	canonical	3	1973	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTCTCGGTCTTTTTTTC	-76654139	True	NA	-4	True	ATTAAA	-31	NA	76737333	76734114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_76736465_76736798
transcript_91595.known	chr17	+	1006	4	FSM	ENSG00000181038.14	ENST00000590964.5	1006	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	95.2272136640689	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGATTGTTCCTTAGT	76724418	True	NA	NA	False	ATTAAA	-15	NA	76726853	76733878	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_76727179_76732977_76733216_76733292_76733378_76733520
transcript_91596.known	chr17	+	1128	5	FSM	ENSG00000181038.14	ENST00000341249.11	1128	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	83.2856530261965	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGATTGTTCCTTAGTCA	76724403	True	NA	NA	False	ATTAAA	-17	NA	76726838	76733880	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_76727179_76729689_76729795_76732977_76733216_76733292_76733378_76733520
transcript_91597.known	chr17	+	4486	17	FSM	ENSG00000167889.13	ENST00000301618.8	4486	17	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_11	8.09296569559021	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTGCAGAAGAGGAACTGT	76868267	True	NA	8	True	AATAAA	-18	NA	76868455	76950377	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_76869098_76872850_76872964_76882150_76882299_76902554_76902671_76903302_76903377_76904251_76904423_76905168_76905334_76906017_76906188_76924965_76925098_76926596_76926731_76932644_76932776_76937987_76938144_76940401_76940549_76940731_76940849_76946375_76946451_76947829_76948087_76948639
transcript_91600.nnic	chr17	+	5028	19	NNC	ENSG00000129657.16	novel	2908	18	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	59.090770309774	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTCTTTTTCTTATTGT	77135861	True	NA	NA	False	AATAAA	-21	NA	77140897	77217101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_77141108_77142645_77142751_77143566_77143660_77190802_77190953_77191180_77191313_77193420_77193550_77194676_77194912_77196201_77196312_77200483_77200674_77203569_77203659_77205275_77205347_77206228_77206401_77206727_77206863_77209341_77209477_77211949_77212202_77213313_77213493_77213917_77215715_77216153_77216271_77216374
transcript_91602.nnic	chr17	+	4957	19	NNC	ENSG00000129657.16	novel	5500	17	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	2	2	junction_18	58.9226318421867	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTCTTTTTCTTATTGT	77135932	True	NA	NA	False	AATAAA	-21	NA	77140968	77217101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_77141108_77142645_77142751_77143566_77143660_77190802_77190953_77191180_77191313_77193420_77193550_77194676_77194912_77196201_77196312_77200483_77200674_77203569_77203659_77205275_77205347_77206228_77206401_77206727_77206863_77209341_77209477_77211949_77212202_77213313_77213493_77213917_77215780_77216231_77216284_77216374
transcript_91605.known	chr17	+	2908	18	FSM	ENSG00000129657.16	ENST00000443798.8	2908	18	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_17	44.4644409072048	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTCTTTTTCTTATTGT	77135995	True	NA	NA	False	AATAAA	-21	NA	77141031	77217101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_77141108_77142645_77142751_77143566_77143660_77190802_77190953_77191180_77191313_77193420_77193550_77194676_77194912_77196201_77196312_77200483_77200674_77203569_77203659_77205275_77205347_77206228_77206401_77206727_77206863_77209341_77209477_77211949_77212202_77213313_77213493_77213917_77214020_77216548
transcript_91608.known	chr17	+	5500	17	FSM	ENSG00000129657.16	ENST00000436233.9	5500	17	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_4	15.8922150753128	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTCTTTTTCTTATTGT	77135932	True	NA	NA	False	AATAAA	-21	NA	77140968	77217101	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_77141108_77142645_77142751_77143566_77143660_77190802_77190953_77191180_77191313_77193420_77193550_77194676_77194912_77196201_77196312_77200483_77200674_77203569_77203659_77205275_77205347_77206228_77206401_77206727_77206863_77209341_77209477_77211949_77212202_77213313_77213493_77213917
transcript_91613.known	chr17	+	603	4	FSM	ENSG00000234912.12	ENST00000561633.5	603	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	14.2361043360417	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTATTGAATTAAAATAA	77086994	True	NA	NA	False	AAAACA	-9	NA	77088748	77099196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_77088950_77089152_77089272_77093243_77093348_77099017
transcript_91614.known	chr17	+	2185	3	FSM	ENSG00000234912.12	ENST00000434411.6	2185	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	2	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGACTCGTTCTCCTGTGTG	NA	False	NA	10	True	AATAAA	-20	NA	77088630	77094990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_77088950_77089152_77089272_77093243
transcript_91615.known	chr17	+	849	2	FSM	ENSG00000234912.12	ENST00000366365.3	849	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGATGAAACCCCATTTC	77087023	True	NA	NA	False	NA	NA	NA	77088777	77089829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_77088950_77089152
transcript_91618.known	chr17	+	1338	4	FSM	ENSG00000234912.12	ENST00000566583.5	1338	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	16.1107279647928	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTACTGACTCGTTCTC	77086994	True	NA	3	True	AATAAA	-13	NA	77088748	77094983	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_77088950_77089152_77089272_77093243_77093348_77094069
transcript_9162.nic	chr1	-	834	7	ISM	ENSG00000132122.12	ENST00000371843.7	2297	13	-218	101680	-20	66	5prime_fragment	FALSE	canonical	3	27	junction_4	7.6594168620507	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACGAACAGCCTACAATTT	NA	False	NA	60	True	AGTAAA	-21	NA	48472228	48399516	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_48399645_48403801_48403883_48411463_48411589_48413109_48413152_48451551_48451601_48452993_48453132_48471957
transcript_91623.known	chr17	+	3733	12	FSM	ENSG00000184640.20	ENST00000427177.6	3733	12	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	198.768397973767	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGCTCCTGAGTGAGAAT	77277177	True	NA	26	True	AATAAA	-22	NA	77281498	77500593	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_77281555_77307140_77307198_77402058_77402704_77482143_77482336_77487423_77487553_77488239_77488322_77488726_77488865_77490741_77490860_77492620_77492717_77492979_77493077_77497314_77497367_77498522
transcript_91625.known	chr17	+	3996	12	FSM	ENSG00000184640.20	ENST00000449803.6	3996	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	215.329346055588	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGCTCCTGAGTGAGAA	77283569	False	NA	25	True	AATAAA	-21	NA	77287890	77500592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_77288211_77307140_77307198_77402058_77402704_77482143_77482336_77487423_77487553_77488239_77488322_77488726_77488865_77490741_77490860_77492620_77492717_77492979_77493077_77497314_77497367_77498522
transcript_9163.known	chr1	-	1693	6	FSM	ENSG00000162373.13	ENST00000371833.4	1693	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	13.7025545063685	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTCTTTATCCTCATTT	-48776874	False	NA	NA	False	AATAAA	-23	NA	48776891	48727518	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_48728044_48736238_48736453_48742622_48742772_48758899_48759285_48761336_48761471_48776605
transcript_91631.known	chr17	+	2160	11	FSM	ENSG00000184640.20	ENST00000591198.5	2160	11	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_1	187.226627379761	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCACTTGCAGAGGAGCCCA	77277129	True	NA	NA	False	NA	NA	NA	77281450	77499029	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_77281555_77402058_77402704_77482143_77482336_77487423_77487553_77488239_77488322_77488726_77488865_77490741_77490860_77492620_77492717_77492979_77493077_77497314_77497367_77498522
transcript_91633.known	chr17	+	3984	11	FSM	ENSG00000184640.20	ENST00000423034.6	3984	11	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_1	144.442549132865	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCTCCTGAGTGAGAATG	77373059	False	NA	27	True	AATAAA	-23	NA	77373189	77500594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_77373553_77402058_77402704_77482143_77482336_77487423_77487553_77488239_77488322_77488726_77488865_77490741_77490860_77492620_77492717_77492979_77493077_77497314_77497367_77498522
transcript_9164.known	chr1	-	1465	6	FSM	ENSG00000162373.13	ENST00000463562.1	1465	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	20.8844439715306	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTTTCGTGTTTTCCTT	-48776915	False	NA	NA	False	AATAAA	-16	NA	48776932	48727869	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_48728044_48736238_48736453_48742622_48742772_48758899_48759367_48761336_48761471_48776605
transcript_91644.known	chr17	+	3026	10	FSM	ENSG00000184640.20	ENST00000541152.6	3026	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	183.175083215789	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCTCCTGAGTGAGAATG	77450689	False	NA	27	True	AATAAA	-23	NA	77450736	77500594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_77450787_77482143_77482336_77487423_77487553_77488239_77488322_77488726_77488865_77490741_77490860_77492620_77492717_77492979_77493077_77497314_77497367_77498522
transcript_91645.known	chr17	+	1691	10	FSM	ENSG00000184640.20	ENST00000591088.5	1691	10	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	148.033029347432	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTCGCACTTGCAGAGGA	77451219	False	NA	NA	False	NA	NA	NA	77451243	77499024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_77451529_77482143_77482336_77487423_77487553_77488239_77488322_77488726_77488865_77490741_77490860_77492620_77492717_77492979_77493077_77497314_77497367_77498522
transcript_91647.nic	chr17	+	3143	10	NIC	ENSG00000184640.20	novel	817	6	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	109	junction_1	156.673837503345	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGCTCCTGAGTGAGAA	77460929	True	NA	25	True	AATAAA	-21	NA	77466391	77500592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_77466561_77482143_77482336_77487423_77487553_77488239_77488322_77488726_77488865_77490741_77490860_77492620_77492717_77492979_77493077_77497314_77497367_77498522
transcript_9166.known	chr1	+	1653	7	FSM	ENSG00000162374.18	ENST00000448907.7	1653	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	2.75378527364305	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAAAATAATA	50047881	True	NA	NA	False	AAGAAA	-4	NA	50048013	50201570	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_50048183_50144956_50145198_50177088_50177193_50193764_50193919_50195560_50195787_50197428_50197468_50200850
transcript_91676.nnic	chr17	-	3306	20	NNC	ENSG00000141524.17	novel	8387	20	NA	NA	335	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_19	69.1412300678174	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGTCCCTTGGGGCT	-78128156	False	4162	-17	True	ATTAAA	-14	NA	78128295	78112921	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_78113212_78113547_78113625_78117268_78117348_78117467_78117645_78117801_78117936_78118970_78119047_78119296_78119393_78120652_78120833_78121012_78121165_78121555_78121712_78122604_78122750_78123988_78124180_78124523_78124782_78124888_78124986_78125157_78125264_78125725_78125885_78126276_78126367_78126523_78126649_78126776_78126907_78127707
transcript_91678.nic	chr17	-	2864	20	NIC	ENSG00000141524.17	novel	8387	20	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	66	junction_19	59.1355080323938	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGTCCCTTGGGGCT	-78124642	True	NA	-17	True	ATTAAA	-14	NA	78128804	78112921	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_78113212_78113547_78113625_78117268_78117348_78117467_78117645_78117801_78117936_78118970_78119047_78119296_78119393_78120652_78120833_78121012_78121165_78121555_78121712_78122604_78122750_78123988_78124180_78124523_78124782_78124888_78124986_78125157_78125264_78125725_78125885_78126276_78126367_78126523_78126649_78126776_78126907_78128658
transcript_91679.known	chr17	-	2786	20	FSM	ENSG00000141524.17	ENST00000322914.7	2786	20	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_19	69.3272779513522	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTTGTCCCTTGGGGCTC	-78132268	False	NA	-16	True	ATTAAA	-15	NA	78132407	78112920	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_78113212_78113547_78113625_78117268_78117348_78117467_78117645_78117801_78117936_78118970_78119047_78119296_78119393_78120652_78120833_78121012_78121165_78121555_78121712_78122604_78122750_78123988_78124180_78124523_78124782_78124888_78124986_78125157_78125264_78125725_78125885_78126276_78126367_78126523_78126649_78126776_78126907_78132340
transcript_91681.nic	chr17	-	2970	20	NIC	ENSG00000141524.17	novel	8387	20	NA	NA	-13	0	combination_of_known_junctions	TRUE	canonical	3	10	junction_19	69.1412300678174	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGTCCCTTGGGGCT	-78124633	True	NA	-17	True	ATTAAA	-14	NA	78128795	78112921	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_78113212_78113547_78113625_78117268_78117348_78117467_78117645_78117801_78117936_78118970_78119047_78119296_78119393_78120652_78120833_78121012_78121165_78121555_78121712_78122604_78122750_78123988_78124180_78124523_78124782_78124888_78124986_78125157_78125264_78125725_78125885_78126276_78126367_78126523_78126649_78126776_78126975_78128611
transcript_9170.known	chr1	-	6821	19	FSM	ENSG00000185104.21	ENST00000396153.7	6821	19	0	0	0	0	multi-exon	TRUE	canonical	3	297	junction_9	28.2427746687122	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTCAGTCTATAAACTCT	-50956688	True	NA	-3	True	AATAAA	-17	NA	50960267	50437027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_50441524_50475463_50475680_50490587_50490666_50491720_50491802_50535368_50535458_50539591_50539729_50567076_50567232_50582617_50582700_50583651_50583716_50584684_50584812_50596120_50596217_50655441_50655529_50705785_50705892_50738862_50738955_50744683_50744776_50787999_50788206_50801630_50801678_50857928_50857998_50959766
transcript_9173.known	chr1	+	3074	3	FSM	ENSG00000123091.5	ENST00000242719.4	3074	3	0	0	0	0	multi-exon	FALSE	canonical	3	509	junction_1	31.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCTAAAGTTAGAGTTGAT	51231929	True	NA	7	True	AATAAA	-20	NA	51236272	51273447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_51236880_51269955_51270126_51271150
transcript_91733.known	chr17	+	1495	4	FSM	ENSG00000108639.8	ENST00000225777.8	1495	4	0	0	0	0	multi-exon	FALSE	canonical	3	923	junction_2	63.6465936943124	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCAGTCATTGGTTGAG	78159575	True	NA	15	True	AATAAA	-15	NA	78168580	78172720	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_78168716_78170816_78171055_78171509_78171650_78171738
transcript_91734.known	chr17	+	2239	4	FSM	ENSG00000108639.8	ENST00000590201.1	2239	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	449.748818786665	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACAGTGCCTCTTCCTTCC	78160152	False	NA	NA	False	NA	NA	NA	78169157	78173527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_78169230_78170816_78171055_78171509_78171650_78171738
transcript_91737.known	chr17	+	1553	3	FSM	ENSG00000108639.8	ENST00000588282.5	1553	3	0	0	0	0	multi-exon	FALSE	canonical	3	923	junction_2	77.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTCCAGTCATTGGTTGA	78159605	True	NA	14	True	AATAAA	-14	NA	78168610	78172719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_78168716_78170816_78171055_78171509
transcript_91738.known	chr17	+	2125	3	FSM	ENSG00000108639.8	ENST00000589168.1	2125	3	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_2	468	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACAGTGCCTCTTCCTTCC	78159612	True	NA	NA	False	NA	NA	NA	78168617	78173527	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_78168716_78170816_78171055_78171738
transcript_91740.known	chr17	+	796	3	FSM	ENSG00000108639.8	ENST00000589183.1	796	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	71	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCCCTGGACTTTCCCA	78159596	True	NA	NA	False	NA	NA	NA	78168601	78171977	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_78168716_78170611_78171055_78171738
transcript_91743.known	chr17	-	631	8	FSM	ENSG00000167900.12	ENST00000586613.1	631	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	485.760586028525	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACCACTCCGTGTGTCGG	-78179064	True	NA	NA	False	NA	NA	NA	78187063	78174925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_78174951_78175049_78175170_78175528_78175619_78182588_78182683_78183753_78183778_78185054_78185166_78186786_78186819_78186928
transcript_91747.known	chr17	-	642	7	FSM	ENSG00000167900.12	ENST00000590862.5	642	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	414.593274587678	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCATGCTGCCCAGCCACT	-78179037	True	NA	NA	False	NA	NA	NA	78187036	78174701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_78174789_78175049_78175170_78175528_78175619_78182588_78182683_78185054_78185166_78186786_78186819_78186928
transcript_91748.known	chr17	-	1431	7	FSM	ENSG00000167900.12	ENST00000301634.12	1431	7	0	0	0	0	multi-exon	FALSE	canonical	3	954	junction_1	77.2990225610188	1416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGGTGGACGCACATT	-78179053	True	NA	NA	False	NA	NA	NA	78187052	78174090	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_78174951_78175049_78175170_78175528_78175619_78182588_78182683_78185054_78185166_78186786_78186819_78186928
transcript_91753.known	chr17	-	1681	6	FSM	ENSG00000167900.12	ENST00000588734.5	1681	6	0	0	0	0	multi-exon	FALSE	canonical	3	1002	junction_1	57.877802307966	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTTATGAAATTAACTAAT	NA	False	NA	NA	False	GGGGCT	-45	NA	78187233	78174120	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_78175170_78175528_78175619_78182588_78182683_78185054_78185166_78186786_78186819_78186928
transcript_91755.known	chr17	+	1730	11	FSM	ENSG00000183077.16	ENST00000409257.10	1686	11	-45	1	-41	0	multi-exon	FALSE	canonical	0	0	junction_7	20.3492014585339	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGCTCGTTCATTTACG	NA	False	NA	9	True	AATAAA	-17	NA	78187316	78207701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_78187434_78190969_78191061_78202498_78202604_78202702_78202752_78204655_78204742_78204827_78204901_78205092_78205191_78205439_78205519_78205602_78205739_78205945_78206051_78206910
transcript_91761.nic	chr17	+	1249	6	NIC	ENSG00000183077.16	novel	1700	11	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	16.3095064303001	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGCTCGTTCATTTACG	78179591	True	NA	9	True	AATAAA	-17	NA	78187325	78207701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_78187434_78190969_78191061_78202498_78202604_78202702_78202752_78205945_78206051_78206910
transcript_91763.known	chr17	+	647	5	FSM	ENSG00000183077.16	ENST00000588800.5	647	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	23.4560759719097	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGATGACGCTCAAAAGTA	78179627	True	NA	NA	False	NA	NA	NA	78187361	78207240	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_78187434_78190969_78191061_78202702_78202752_78205945_78206051_78206910
transcript_91766.known	chr17	+	550	3	FSM	ENSG00000183077.16	ENST00000586731.1	550	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	29.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTGGTATTTTGTTA	78179666	True	NA	3	True	AATAAA	-17	NA	78187400	78197560	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_78187434_78190969_78191061_78197134
transcript_91767.known	chr17	+	582	3	FSM	ENSG00000183077.16	ENST00000591952.5	582	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	33	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTGCAGTGGCGTGAT	78179627	True	NA	NA	False	NA	NA	NA	78187361	78207329	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_78187434_78190969_78191061_78206910
transcript_9177.known	chr1	-	2718	18	FSM	ENSG00000085831.16	ENST00000680483.1	2718	18	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_17	6.25025951018329	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTGTGTATGCGTTAGA	-51330462	True	NA	29	True	NA	NA	NA	51330562	51287257	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_51288281_51288838_51288956_51290004_51290120_51290513_51290626_51294390_51294512_51296078_51296171_51301571_51301734_51302356_51302417_51302505_51302574_51303083_51303193_51305080_51305147_51305976_51306077_51309260_51309326_51311253_51311322_51312118_51312196_51312811_51312944_51321720_51321826_51330436
transcript_91770.known	chr17	+	2711	5	FSM	ENSG00000089685.15	ENST00000301633.8	2711	5	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	730.601250683299	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTCTTTTTCTTTT	NA	False	NA	12	True	AATAAA	-22	NA	78214185	78225636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_78214428_78214679_78214790_78215965_78216035_78216663_78216782_78223464
transcript_91774.known	chr17	+	648	5	FSM	ENSG00000089685.15	ENST00000590925.6	648	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	842.78541159657	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTCTGGCCGGAGCTGCC	78200887	True	NA	NA	False	NA	NA	NA	78214262	78223554	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_78214428_78214679_78214790_78216663_78216782_78222827_78222993_78223464
transcript_91781.known	chr17	+	2574	4	FSM	ENSG00000089685.15	ENST00000350051.8	2574	4	0	0	0	0	multi-exon	FALSE	canonical	3	1306	junction_3	185.581967514806	1414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTCTTTTTCTTT	78200877	True	NA	11	True	AATAAA	-21	NA	78214252	78225635	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_78214428_78214679_78214790_78216663_78216782_78223464
transcript_91788.nic	chr17	+	458	3	ISM	ENSG00000089685.15	ENST00000590925.6	648	5	-64	6772	13	1683	5prime_fragment	FALSE	canonical	3	1665	junction_2	31	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTATTGGGAATAAGAAC	NA	False	NA	NA	False	NA	NA	NA	78214198	78216782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_78214428_78214679_78214790_78216663
transcript_91789.known	chr17	+	2446	3	FSM	ENSG00000089685.15	ENST00000374948.6	2446	3	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	802.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTCTTTTTCTTTT	78200888	True	NA	12	True	AATAAA	-22	NA	78214263	78225636	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_78214428_78214679_78214790_78223464
transcript_9179.known	chr1	-	2718	18	FSM	ENSG00000085831.16	ENST00000413473.6	2718	18	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_17	6.25025951018329	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTGTGTATGCGTTAGA	-51344985	True	NA	29	True	NA	NA	NA	51345116	51287257	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_51288281_51288838_51288956_51290004_51290120_51290513_51290626_51294390_51294512_51296078_51296171_51301571_51301734_51302356_51302417_51302505_51302574_51303083_51303193_51305080_51305147_51305976_51306077_51309260_51309326_51311253_51311322_51312118_51312196_51312811_51312944_51321720_51321826_51344990
transcript_91793.known	chr17	+	568	2	FSM	ENSG00000089685.15	ENST00000590449.1	568	2	0	0	0	0	multi-exon	FALSE	canonical	3	1727	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAACAGTTTAATTGA	78200904	True	NA	NA	False	NA	NA	NA	78214279	78215099	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_78214428_78214679
transcript_91797.known	chr17	-	2734	2	FSM	ENSG00000184557.4	ENST00000330871.3	2734	2	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	0	186	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGACTTGAGCCTTTTCTG	-78357147	True	NA	NA	False	AATAAA	-24	NA	78360077	78356777	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_78359184_78359749
transcript_91798.nnic	chr17	+	877	4	NNC	ENSG00000266970.2	novel	874	3	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	3.68178700572909	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATATTCATTCATGATG	78359809	True	NA	-14	True	CATAAA	-7	NA	78360440	78364905	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_78360774_78361765_78361822_78362672_78362752_78364496
transcript_9180.known	chr1	-	2722	18	FSM	ENSG00000085831.16	ENST00000439482.6	2722	18	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_13	7.88542521338246	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAATTTATGAAACATAAAA	-51330450	True	NA	-60	True	NA	NA	NA	51330550	51287346	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_51288281_51288838_51288956_51290004_51290120_51290513_51290626_51294390_51294512_51296078_51296171_51301571_51301734_51302356_51302417_51302505_51302574_51303083_51303193_51305080_51305147_51305976_51306077_51309260_51309431_51311253_51311322_51312118_51312196_51312811_51312944_51321720_51321826_51330436
transcript_91821.known	chr17	+	2297	10	FSM	ENSG00000087157.19	ENST00000262764.11	2297	10	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_3	61.9039478985961	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGTTGTGTGGGAAAT	78372180	True	NA	14	True	AATAAA	-18	NA	78378648	78424659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_78378809_78392475_78392666_78396307_78396386_78398251_78398352_78399347_78399538_78400676_78400856_78403567_78404090_78414878_78415028_78419545_78419676_78424060
transcript_91828.nic	chr17	+	2270	10	NIC	ENSG00000087157.19	novel	2297	10	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_7	77.9458501496748	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGTTGTGTGGGAAAT	78378579	False	NA	14	True	AATAAA	-18	NA	78378602	78424659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_78378809_78392475_78392666_78396307_78396386_78398251_78398352_78399347_78399538_78400676_78400856_78403567_78404090_78414951_78415028_78419545_78419676_78424060
transcript_91871.nic	chr17	+	2160	9	NIC	ENSG00000087157.19	novel	2033	9	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	3	156	junction_2	55.132652530057	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATATTGCCTTTAACCA	78378579	False	NA	3	True	AATATA	-18	NA	78378602	78424554	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_78378809_78392475_78392666_78398251_78398352_78399347_78399538_78400676_78400856_78403567_78404090_78414878_78415028_78419545_78419676_78424060
transcript_91872.nic	chr17	+	2265	9	NIC	ENSG00000087157.19	novel	2297	10	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	3	156	junction_2	55.132652530057	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGTTGTGTGGGAAAT	78378579	False	NA	14	True	AATAAA	-18	NA	78378602	78424659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_78378809_78392475_78392666_78398251_78398352_78399347_78399538_78400676_78400856_78403567_78404090_78414878_78415028_78419545_78419676_78424060
transcript_91877.known	chr17	+	2033	9	FSM	ENSG00000087157.19	ENST00000589426.5	2033	9	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_6	77.3618728767602	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATATTGCCTTTAACCA	78372188	True	NA	3	True	AATATA	-18	NA	78378656	78424554	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_78378809_78392475_78392666_78398251_78398352_78399347_78399538_78400676_78400856_78403567_78404090_78414951_78415028_78419545_78419676_78424060
transcript_91920.known	chr17	+	988	7	FSM	ENSG00000087157.19	ENST00000592043.5	988	7	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_3	72.4647423847549	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGACCCAGGAAGATGCAG	78372201	True	NA	NA	False	NA	NA	NA	78378669	78403679	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_78378809_78392475_78392666_78396307_78396386_78398251_78398352_78399347_78399538_78400676_78400856_78403567
transcript_91931.known	chr17	+	1168	6	FSM	ENSG00000087157.19	ENST00000589689.5	1168	6	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_2	67.9570452565442	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCACCAGAGGTGAATGGC	78372182	True	NA	NA	False	NA	NA	NA	78378650	78403918	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_78378809_78392475_78392666_78398251_78398352_78399347_78399538_78400676_78400856_78403567
transcript_91941.known	chr17	-	3756	14	FSM	ENSG00000108669.17	ENST00000589297.5	3756	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	35.7416767320911	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGTTGTTCGCGGTGTC	NA	False	NA	-1	True	AATAAA	-21	NA	78723750	78674047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_78676170_78680189_78680345_78680970_78681043_78692416_78692494_78696006_78696010_78698268_78698381_78698819_78698969_78700330_78700444_78701670_78701752_78702121_78702241_78702537_78702605_78708196_78708262_78709649_78709733_78723212
transcript_91945.nic	chr17	-	3417	14	NIC	ENSG00000108669.17	novel	3290	14	NA	NA	-54	-3	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	30.5674150674427	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATCTTTGTTGTTCGCGG	-78780814	True	NA	-5	True	AATAAA	-17	NA	78782351	78674051	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_78676170_78676994_78677051_78680189_78680345_78680970_78681043_78692416_78692494_78698268_78698381_78698819_78698969_78700330_78700444_78701670_78701752_78702121_78702241_78702537_78702605_78708196_78708262_78709649_78709733_78782201
transcript_91948.known	chr17	-	3286	13	FSM	ENSG00000108669.17	ENST00000591455.5	3286	13	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_12	11.2998893799895	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGTTGTTCGCGGTGTC	-78780735	True	NA	-1	True	AATAAA	-21	NA	78782272	78674047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_78676170_78680189_78680345_78680970_78681043_78692416_78692494_78698268_78698381_78698819_78698969_78700330_78700444_78701670_78701752_78702121_78702241_78702537_78702605_78708196_78708262_78709649_78709733_78782201
transcript_91955.nic	chr17	-	2864	12	ISM	ENSG00000108669.17	ENST00000591455.5	3286	13	-79	4521	-54	-2450	5prime_fragment	FALSE	canonical	3	63	junction_11	10.7810669675444	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATTGAATCATTATGAAA	-78780814	True	NA	NA	False	NA	NA	NA	78782351	78678568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_78680345_78680970_78681043_78692416_78692494_78698268_78698381_78698819_78698969_78700330_78700444_78701670_78701752_78702121_78702241_78702537_78702605_78708196_78708262_78709649_78709733_78782201
transcript_91958.nnic	chr17	-	3176	11	NIC	ENSG00000108669.17	novel	3311	13	NA	NA	-54	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	26.2259413558408	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGTTGTTCGCGGTGTC	-78780814	True	NA	-1	True	AATAAA	-21	NA	78782351	78674047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_78676170_78680189_78680345_78680970_78681043_78698819_78698969_78700330_78700444_78701670_78701752_78702121_78702241_78702537_78702605_78708196_78708262_78709649_78709733_78782201
transcript_91970.known	chr17	-	4423	1	FSM	ENSG00000108669.17	ENST00000586299.1	4423	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTGTTGTTCGCGGTGT	NA	False	NA	-2	True	AATAAA	-20	NA	78678471	78674048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_78674000_78678500
transcript_91971.known	chr17	-	3311	13	FSM	ENSG00000108669.17	ENST00000361101.8	3311	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	24.9499498997493	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGTTGTTCGCGGTGTC	-78780757	True	NA	-1	True	AATAAA	-21	NA	78782294	78674047	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_78676170_78680189_78680345_78680970_78681043_78692416_78692496_78698267_78698381_78698819_78698969_78700330_78700444_78701670_78701752_78702121_78702241_78702537_78702605_78708196_78708262_78709649_78709733_78782201
transcript_91972.nic	chr17	-	4009	21	NIC	ENSG00000055483.20	novel	5885	21	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	36.4919169132015	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGGGTGCTTCCTTGT	-78833946	True	NA	2	True	AATACA	-24	NA	78840901	78787380	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_78787659_78798399_78798552_78798907_78799024_78799666_78799769_78802323_78802536_78803384_78803979_78806155_78806287_78806958_78807637_78812859_78813002_78813772_78813874_78814411_78814553_78818666_78818779_78819929_78820013_78820990_78821062_78821936_78822005_78827244_78827348_78828896_78829008_78835279_78835502_78836110_78836373_78838586_78838751_78840735
transcript_91977.nic	chr17	-	4723	21	FSM	ENSG00000055483.20	ENST00000449938.7	5872	21	-87	1236	-14	-5	multi-exon	FALSE	canonical	3	69	junction_1	31.1457862318484	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGGTGATATTTTCAGG	-78833946	True	NA	-1	True	AATAAA	-16	NA	78840901	78796887	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_78797880_78798399_78798552_78798907_78799024_78799666_78799769_78802323_78802536_78803384_78803979_78806155_78806287_78806958_78807637_78812859_78813002_78813772_78813874_78814411_78814553_78818666_78818779_78819929_78820013_78820990_78821062_78821936_78822005_78827244_78827348_78828896_78829008_78835279_78835502_78836110_78836373_78838586_78838751_78840735
transcript_91989.nic	chr17	-	3580	19	ISM	ENSG00000055483.20	ENST00000312010.10	5234	20	-14	2024	-14	-2024	5prime_fragment	FALSE	canonical	3	136	junction_10	22.246722605064	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATGTGTGATGCTGACC	-78833946	True	NA	-1	True	NA	NA	NA	78840901	78798906	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_78799024_78799666_78799769_78802323_78802536_78803384_78803979_78806155_78806287_78806958_78807637_78812859_78813002_78813772_78813874_78814411_78814553_78818666_78818779_78819929_78820013_78820990_78821062_78821936_78822005_78827244_78827348_78828896_78829008_78835279_78835502_78836110_78836373_78838586_78838751_78840735
transcript_920.known	chr1	-	1186	6	FSM	ENSG00000221978.13	ENST00000408918.8	1186	6	0	0	0	0	multi-exon	FALSE	canonical	3	846	junction_1	159.272094228713	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAAGATTTCATTTGTTT	-1399307	False	14990	-7	True	AATACA	-18	NA	1399317	1392287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1392804_1393395_1393461_1395393_1395515_1398232_1398343_1398596_1398672_1399018
transcript_92010.known	chr17	-	3187	17	ISM	ENSG00000055483.20	ENST00000312010.10	5234	20	23	5578	8	924	5prime_fragment	FALSE	canonical	3	136	junction_8	17.4918507811495	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGAGACACAGCGGGCAG	-78833909	True	NA	NA	False	AAAAAG	-18	NA	78840864	78802460	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_78802536_78803384_78803979_78806155_78806287_78806958_78807637_78812859_78813002_78813772_78813874_78814411_78814553_78818666_78818779_78819929_78820013_78820990_78821062_78821936_78822005_78827244_78827348_78828896_78829008_78835279_78835502_78836110_78836373_78838586_78838751_78840735
transcript_92030.known	chr17	-	5234	20	FSM	ENSG00000055483.20	ENST00000312010.10	5234	20	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_11	22.1632072641278	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTGATATTTTCAGGAAAAA	-78833932	True	NA	4	True	AATAAA	-21	NA	78840887	78796882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_78798552_78798907_78799024_78799666_78799769_78802323_78802536_78803384_78803979_78806155_78806287_78806958_78807637_78812859_78813002_78813772_78813874_78814411_78814553_78818666_78818779_78819929_78820013_78820990_78821062_78821936_78822005_78827244_78827348_78828896_78829008_78835279_78835502_78836110_78836373_78838586_78838751_78840735
transcript_92031.known	chr17	-	2479	3	ISM	ENSG00000055483.20	ENST00000592231.6	5895	21	41830	1	6	0	3prime_fragment	FALSE	canonical	3	53	junction_1	69.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTGTGTCTTTGTTGGT	-78798974	False	NA	-13	True	AATAAA	-17	NA	78798984	78795652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_78797903_78798399_78798552_78798907
transcript_92032.known	chr17	-	3652	5	FSM	ENSG00000035862.12	ENST00000262768.11	3652	5	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	10.0498756211209	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGGCTCTCTCCGTGTGG	-78923432	True	NA	-7	True	AATAAA	-19	NA	78925387	78852976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_78855865_78857521_78857647_78870897_78871007_78873818_78873920_78924958
transcript_92037.known	chr17	-	2202	6	FSM	ENSG00000108679.13	ENST00000262776.8	2202	6	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_2	23.6693895147298	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGTTTGTACAGAAAGT	-78976573	True	NA	-15	True	ATTAAA	-19	NA	78979923	78971254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_78972705_78972969_78973223_78974687_78974820_78975964_78976157_78977139_78977215_78979823
transcript_92038.known	chr17	-	1961	5	FSM	ENSG00000108679.13	ENST00000591778.5	1961	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	160.160076173808	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTGTTGGGTCCACACC	-78976568	True	NA	2	True	ATTAAA	-36	NA	78979918	78971237	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_78972705_78974687_78974820_78975964_78976157_78977139_78977215_78979823
transcript_92042.known	chr17	-	936	5	FSM	ENSG00000108679.13	ENST00000585407.5	936	5	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_1	25.9133170396999	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCACTCAGGTGGCTG	-78976585	True	NA	NA	False	NA	NA	NA	78979935	78972797	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_78973223_78974687_78974820_78975964_78976157_78977139_78977215_78979823
transcript_92049.nic	chr17	-	3082	6	NIC	ENSG00000171302.17	novel	1669	6	NA	NA	-15	0	intron_retention	FALSE	canonical	3	28	junction_1	50.6580694460419	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTAGTTTTCTGTCTCCCGG	NA	False	NA	-14	True	AATAAA	-14	NA	79009832	78991719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_78992141_78992409_78993921_78995017_78995222_78996991_78997645_78997839_78997964_79009663
transcript_9205.known	chr1	-	5163	25	FSM	ENSG00000085832.17	ENST00000371733.8	5163	25	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_14	16.6582791394816	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGTTATCATGTCGTG	-51514851	True	NA	-9	True	AATAAA	-20	NA	51519266	51354262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_51356847_51361170_51361356_51363865_51364029_51365952_51366030_51394380_51394448_51399031_51399166_51400917_51400954_51402434_51402526_51403418_51403533_51405904_51406109_51408134_51408333_51409534_51409697_51421785_51421859_51440346_51440433_51444888_51445046_51446959_51447106_51448045_51448136_51461090_51461151_51463672_51463799_51465260_51465327_51468472_51468569_51471689_51471738_51472858_51472949_51481272_51481315_51519198
transcript_92051.known	chr17	-	3287	5	FSM	ENSG00000171302.17	ENST00000392446.10	3287	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_3	31.1638813372147	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTCTGTCTCCCGGTCTG	-79007206	True	NA	-10	True	AATAAA	-18	NA	79009764	78991715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_78993921_78995017_78995222_78996991_78997645_78997839_78997964_79009663
transcript_92052.nic	chr17	-	3277	5	NIC	ENSG00000171302.17	novel	3534	4	NA	NA	-15	0	intron_retention	FALSE	canonical	3	28	junction_1	53.625437061156	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTAGTTTTCTGTCTCCCGG	NA	False	NA	-14	True	AATAAA	-14	NA	79009832	78991719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_78992141_78992409_78993921_78995017_78995222_78996991_78997964_79009663
transcript_92054.known	chr17	-	3534	4	FSM	ENSG00000171302.17	ENST00000302345.6	3534	4	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_3	3.29983164553722	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTCTGTCTCCCGGTCT	-79007259	True	NA	-11	True	AATAAA	-17	NA	79009817	78991716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_78993921_78995017_78995222_78996991_78997964_79009663
transcript_92055.known	chr17	+	2886	4	FSM	ENSG00000173918.15	ENST00000579760.6	2886	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	0.942809041582063	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCCTCGTCAGTTTGCT	79024158	False	NA	6	True	ATTAAA	-22	NA	79024168	79049788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_79024495_79043954_79044124_79046554_79046695_79047537
transcript_92056.known	chr17	+	2624	3	FSM	ENSG00000173918.15	ENST00000311661.4	2624	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGCCTCGTCAGTTTGC	79024246	True	NA	5	True	ATTAAA	-21	NA	79024260	79049787	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_79024495_79046554_79046695_79047537
transcript_92076.known	chr17	+	4603	14	FSM	ENSG00000167280.17	ENST00000579016.6	4603	14	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_10	11.3991591094417	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGCAGTCGAGTCCTGGT	79072549	True	NA	18	True	AATAAA	-18	NA	79074823	79088599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_79075091_79077429_79077498_79077662_79077865_79079488_79079638_79080206_79080365_79080924_79081074_79081897_79082064_79083019_79083124_79083481_79083591_79083760_79083952_79084537_79084687_79085233_79085343_79085619_79085735_79085932
transcript_92088.nic	chr17	+	4702	13	ISM	ENSG00000167280.17	ENST00000579016.6	4603	14	99	0	99	0	intron_retention	FALSE	canonical	3	39	junction_10	11.7886480235107	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGCAGTCGAGTCCTGGT	79072648	True	NA	18	True	AATAAA	-18	NA	79074922	79088599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_79075091_79077429_79077498_79077662_79077865_79079488_79079638_79080206_79080365_79080924_79081074_79081897_79082064_79083019_79083124_79083481_79083591_79083760_79083952_79084537_79084687_79085233_79085343_79085619
transcript_92104.nic	chr17	-	561	5	ISM	ENSG00000167281.20	ENST00000581393.5	1201	6	923	-16	141	0	3prime_fragment	FALSE	canonical	3	85	junction_1	15.2212844398888	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGTTAAGATCCAAGCAAC	-79096967	True	NA	25	True	AAAACA	-41	NA	79097585	79090799	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_79090886_79094450_79094530_79095512_79095575_79096652_79096693_79097291
transcript_92123.known	chr17	+	4628	5	FSM	ENSG00000173894.11	ENST00000310942.9	4628	5	0	0	0	0	multi-exon	FALSE	canonical	3	515	junction_4	50.719818611663	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTCAACTATGGCTGT	79765170	True	NA	25	True	ATTAAA	-31	NA	79778147	79787983	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_79778308_79778383_79778428_79779361_79779428_79781695_79781802_79783731
transcript_92124.nnic	chr17	+	490	5	NNC	ENSG00000173894.11	novel	4628	5	NA	NA	-34	405	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_4	250.72145899384	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCCTGATGTACATCAT	79765136	True	NA	20	True	AATAAA	-16	NA	79778113	79788388	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_79778308_79778383_79778428_79779361_79779428_79781695_79781802_79788308
transcript_92129.known	chr17	+	567	3	FSM	ENSG00000173894.11	ENST00000571484.1	567	3	0	0	0	0	multi-exon	FALSE	canonical	3	627	junction_2	10.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCCTTTTCTGCTGAG	79765185	True	NA	3	True	GATAAA	-15	NA	79778162	79779739	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_79778308_79778383_79778428_79779361
transcript_92130.known	chr17	-	3752	5	FSM	ENSG00000141570.11	ENST00000269385.9	3752	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	2.1650635094611	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATGTCTTGGTTTTATTC	-79796961	True	NA	NA	False	AATATA	-16	NA	79797077	79792131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_79795559_79796056_79796124_79796249_79796316_79796496_79796541_79796929
transcript_92141.nnic	chr17	-	3144	13	NNC	ENSG00000167291.16	novel	10960	12	NA	NA	-25	-2112	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	45.4101677307333	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCGATGTGTGCGTGTG	-80028983	True	NA	-5	True	AATACA	-21	NA	80035897	79940019	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_79940695_79940858_79941108_79942059_79942207_79944907_79945088_79947644_79947832_79948871_79949007_79949716_79949866_79950410_79950579_79951449_79951598_79952656_79952819_80010159_80010758_80013366_80013610_80035794
transcript_92151.nnic	chr17	-	2895	13	NNC	ENSG00000167291.16	novel	10960	12	NA	NA	-25	-2361	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	45.4101677307333	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAACCGATGTGGGGATA	-80028983	True	NA	NA	False	CATAAA	-21	NA	80035897	79940268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_79940695_79940858_79941108_79942059_79942207_79944907_79945088_79947644_79947832_79948871_79949007_79949716_79949866_79950410_79950579_79951449_79951598_79952656_79952819_80010159_80010758_80013366_80013610_80035794
transcript_9216.known	chr1	+	3660	24	FSM	ENSG00000117859.19	ENST00000428468.6	3660	24	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_4	186.927702531045	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGACTGCAGTTTATTTAT	51614191	True	NA	12	True	CATAAA	-44	NA	51617091	51789219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_51617222_51651990_51652042_51669433_51669513_51714002_51714080_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51756319_51756359_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_92162.nic	chr17	-	3305	12	NIC	ENSG00000167291.16	novel	10960	12	NA	NA	-25	-2112	combination_of_known_junctions	FALSE	canonical	3	50	junction_7	39.2874551508672	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCGATGTGTGCGTGTG	-80028983	True	NA	-5	True	AATACA	-21	NA	80035897	79940019	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_79941108_79942059_79942207_79944907_79945088_79947644_79947832_79948871_79949007_79949716_79949866_79950410_79950576_79951449_79951598_79952656_79952819_80010159_80010758_80013366_80013610_80035794
transcript_92163.known	chr17	-	10960	12	FSM	ENSG00000167291.16	ENST00000310924.7	10960	12	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_11	28.8673225992572	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGTTTGTGGATTATTG	-80028958	True	NA	NA	False	AATAAA	-23	NA	80035872	79932342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_79941108_79942059_79942207_79944907_79945088_79947644_79947832_79948871_79949007_79949716_79949866_79950410_79950579_79951449_79951598_79952656_79952819_80010159_80010758_80013366_80013610_80035794
transcript_92168.nic	chr17	-	3017	12	NIC	ENSG00000167291.16	novel	10960	12	NA	NA	-25	-2361	combination_of_known_junctions	FALSE	canonical	3	32	junction_6	43.5704046950365	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAACCGATGTGGGGATA	-80028983	True	NA	NA	False	CATAAA	-21	NA	80035897	79940268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_79941108_79942059_79942207_79944907_79945088_79947644_79947832_79948871_79949007_79949716_79949824_79950410_79950579_79951449_79951598_79952656_79952819_80010159_80010758_80013366_80013610_80035794
transcript_92169.nic	chr17	-	3056	12	NIC	ENSG00000167291.16	novel	10960	12	NA	NA	-25	-2361	combination_of_known_junctions	FALSE	canonical	3	50	junction_7	39.2874551508672	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAACCGATGTGGGGATA	-80028983	True	NA	NA	False	CATAAA	-21	NA	80035897	79940268	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_79941108_79942059_79942207_79944907_79945088_79947644_79947832_79948871_79949007_79949716_79949866_79950410_79950576_79951449_79951598_79952656_79952819_80010159_80010758_80013366_80013610_80035794
transcript_92189.known	chr17	-	6342	8	FSM	ENSG00000167291.16	ENST00000576768.5	6342	8	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_7	72.5964523786058	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATCTGTTCTTGGTATTT	-79950586	True	NA	-32	True	AATAGA	-20	NA	79950857	79935791	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_79941108_79942059_79942207_79944907_79945088_79947644_79947832_79948871_79949007_79949716_79949824_79950410_79950579_79950755
transcript_92193.known	chr17	-	4244	8	FSM	ENSG00000167291.16	ENST00000340848.11	4244	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	61.2265781956743	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGCTGCTAATGTCTGC	-79950565	True	NA	1	True	NA	NA	NA	79950836	79937907	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_79941108_79942059_79942207_79944907_79945088_79947644_79947832_79948871_79949007_79949716_79949866_79950410_79950576_79950755
transcript_92201.nic	chr17	-	4458	3	ISM	ENSG00000167291.16	ENST00000310924.7	10960	12	-25	74303	-25	-56075	5prime_fragment	FALSE	canonical	3	112	junction_2	12.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGACATGGATTCTGAAAG	-80028983	True	NA	NA	False	AAAAAG	-19	NA	80035897	80006645	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_80010758_80013366_80013610_80035794
transcript_92202.nic	chr17	-	659	2	ISM	ENSG00000167291.16	ENST00000310924.7	10960	12	-25	80711	-25	-62483	5prime_fragment	FALSE	canonical	3	112	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTTGCTTTATTTAAT	-80028983	True	NA	-1	True	AATAAA	-15	NA	80035897	80013053	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_80013610_80035794
transcript_92204.known	chr17	+	4288	20	FSM	ENSG00000141519.15	ENST00000397545.9	4288	20	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_16	8.34770690227657	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTCTGAGTCAGCCTTA	80035624	True	NA	14	True	AATAAA	-25	NA	80036641	80100613	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_80036692_80038122_80038187_80039811_80040271_80047278_80047403_80048582_80048762_80049905_80049990_80050063_80050284_80058493_80058652_80058857_80058981_80065484_80065607_80081545_80081790_80081875_80082059_80084742_80084989_80086002_80086217_80087606_80087777_80088010_80088103_80089763_80089885_80095262_80095452_80097244_80097404_80099526
transcript_92206.known	chr17	+	1970	11	FSM	ENSG00000141519.15	ENST00000269318.9	1970	11	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_10	7.15821206726931	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTTGAGTGAATATTTTA	80035634	True	NA	20	True	TATAAA	-15	NA	80036651	80067901	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_80036692_80038122_80038187_80039811_80040271_80047278_80047403_80048582_80048762_80049905_80049990_80050063_80050284_80058493_80058652_80058857_80058981_80065484_80065607_80067504
transcript_9221.known	chr1	+	3352	26	FSM	ENSG00000117859.19	ENST00000371714.5	3352	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	240.670416960623	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATCTTTTATTATCTT	NA	False	NA	20	True	CATAAA	-29	NA	51577178	51788469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_51577257_51598123_51598194_51614304_51614420_51616873_51617222_51651990_51652042_51669433_51669513_51714002_51714080_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_92215.known	chr17	+	714	4	FSM	ENSG00000141519.15	ENST00000576241.1	714	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	5.65685424949238	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCTTCTGTGCAAGGGAT	80035659	False	NA	NA	False	NA	NA	NA	80036676	80047454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_80036692_80038122_80038187_80039811_80040271_80047278
transcript_92216.known	chr17	+	816	3	FSM	ENSG00000141519.15	ENST00000572083.5	816	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCGTGGTGGCGCACGCCT	80035646	True	NA	NA	False	ACTAAA	-17	NA	80036663	80040535	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_80036692_80038122_80038187_80039811
transcript_92219.known	chr17	+	3549	21	FSM	ENSG00000171298.13	ENST00000390015.7	3549	21	0	0	0	0	multi-exon	FALSE	canonical	2	221	junction_1	42.2651156392598	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCTTCTGCGGGTCTCTC	80095915	True	NA	14	True	AATAAA	-15	NA	80101593	80119877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_80101626_80101810_80101891_80104554_80105133_80105748_80105895_80107556_80107723_80107799_80107897_80108289_80108410_80108488_80108608_80108696_80108829_80109944_80110056_80110726_80110841_80110940_80111026_80111982_80112101_80112577_80112712_80112875_80113028_80113217_80113367_80116967_80117110_80117599_80117750_80118192_80118358_80118652_80118806_80119271
transcript_92222.nnic	chr17	+	3616	21	NNC	ENSG00000171298.13	novel	3549	21	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_1	75.9937497429887	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCTTCTGCGGGTCTCTC	80095943	True	NA	14	True	AATAAA	-15	NA	80101621	80119877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_80101721_80101810_80101891_80104554_80105133_80105748_80105895_80107556_80107723_80107799_80107897_80108289_80108410_80108488_80108608_80108696_80108829_80109944_80110056_80110726_80110841_80110940_80111026_80111982_80112101_80112577_80112712_80112875_80113028_80113217_80113367_80116967_80117110_80117599_80117750_80118192_80118358_80118652_80118806_80119271
transcript_92225.nic	chr17	+	3532	20	NIC	ENSG00000171298.13	novel	3549	21	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	2	65	junction_1	69.2692766454263	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCTTCTGCGGGTCTCTC	NA	False	NA	14	True	AATAAA	-15	NA	80101530	80119877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_80101626_80104554_80105133_80105748_80105895_80107556_80107723_80107799_80107897_80108289_80108410_80108488_80108608_80108696_80108829_80109944_80110056_80110726_80110841_80110940_80111026_80111982_80112101_80112577_80112712_80112875_80113028_80113217_80113367_80116967_80117110_80117599_80117750_80118192_80118358_80118652_80118806_80119271
transcript_9223.known	chr1	+	2831	23	FSM	ENSG00000117859.19	ENST00000495776.5	2831	23	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	184.080117528813	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATCTTTTATTATCTT	51614191	True	NA	20	True	CATAAA	-29	NA	51617091	51788469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_51617222_51651990_51652042_51714002_51714080_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51756319_51756359_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_92236.known	chr17	+	952	2	FSM	ENSG00000171298.13	ENST00000574376.1	952	2	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCACTTTCCTGAGTTCTGT	80095918	True	NA	NA	False	AATAAA	-18	NA	80101596	80102733	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_80101626_80101810
transcript_92237.known	chr17	+	3751	20	FSM	ENSG00000171298.13	ENST00000302262.8	3751	20	0	0	0	0	multi-exon	FALSE	canonical	2	247	junction_19	35.2322724130957	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCGGGTCTCTCTGGG	80095902	True	NA	18	True	AATAAA	-19	NA	80101580	80119881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_80101891_80104554_80105133_80105748_80105895_80107556_80107723_80107799_80107897_80108289_80108410_80108488_80108608_80108696_80108829_80109944_80110056_80110726_80110841_80110940_80111026_80111982_80112101_80112577_80112712_80112875_80113028_80113217_80113367_80116967_80117110_80117599_80117750_80118192_80118358_80118652_80118806_80119271
transcript_92240.known	chr17	-	2524	12	FSM	ENSG00000141543.12	ENST00000649764.2	2524	12	0	0	0	0	multi-exon	FALSE	canonical	3	1191	junction_7	98.1348372444349	1174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTAAAGTAATTACCTGT	-80132367	True	NA	NA	False	ATTAAA	-23	NA	80147128	80134368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_80135507_80136003_80136132_80136227_80136336_80137385_80137502_80138141_80138281_80139020_80139163_80139669_80139751_80140007_80140141_80141318_80141382_80141781_80141849_80144171_80144245_80146792
transcript_92243.known	chr17	-	1492	11	FSM	ENSG00000141543.12	ENST00000576547.2	1492	11	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_8	429.891428153668	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATATGGGGATTCTGCTCT	-80132378	True	NA	-10	True	CATAAA	-29	NA	80147139	80135348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_80135507_80136003_80136132_80136227_80136336_80137385_80137502_80138141_80138281_80139020_80139163_80139669_80139751_80140007_80140141_80141781_80141849_80144171_80144245_80146792
transcript_92248.known	chr17	-	1579	13	FSM	ENSG00000141543.12	ENST00000647795.1	1579	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	398.745141036226	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTAAGTCTTTTTCATTA	-80132390	True	NA	40	True	AATACA	-3	NA	80147151	80135298	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_80135507_80136003_80136132_80136227_80136336_80137385_80137502_80138141_80138281_80139020_80139163_80139669_80139751_80140007_80140141_80141318_80141382_80141781_80141849_80144171_80144245_80146792_80147023_80147060
transcript_92257.known	chr17	+	2872	18	FSM	ENSG00000181045.15	ENST00000411502.7	2872	18	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	28.1802158876409	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTTTAATGTCTGCGT	80218757	True	NA	43	True	AATAAA	-15	NA	80220437	80253498	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_80220497_80220918_80221116_80221547_80221795_80222654_80222848_80223251_80223338_80225836_80225917_80227817_80227961_80236927_80237104_80237521_80237595_80241770_80241822_80245195_80245257_80246153_80246210_80246508_80246650_80248129_80248258_80248574_80248675_80249153_80249288_80251328_80251402_80252624
transcript_92267.known	chr17	+	1862	17	FSM	ENSG00000181045.15	ENST00000572725.5	1862	17	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	29.0452233594441	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGCCACCCGTGGGCATC	80218788	True	NA	NA	False	NA	NA	NA	80220468	80252716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_80220497_80221547_80221795_80222654_80222848_80223251_80223338_80225836_80225917_80227817_80227961_80236927_80237104_80237521_80237595_80241770_80241822_80245195_80245257_80246153_80246210_80246508_80246650_80248129_80248258_80248574_80248675_80249153_80249288_80251328_80251402_80252624
transcript_92293.known	chr17	-	2705	8	FSM	ENSG00000181523.13	ENST00000326317.11	2705	8	0	0	0	0	multi-exon	TRUE	canonical	3	53	junction_1	10.6157372589482	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGATGATACCAACCTG	-80219452	True	NA	-12	True	AGTAAA	-29	NA	80220333	80209275	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_80211012_80212070_80212275_80213803_80213886_80214171_80214329_80214614_80214766_80215032_80215139_80217031_80217193_80220225
transcript_92295.nic	chr17	-	3824	7	NIC	ENSG00000181523.13	novel	2705	8	NA	NA	-36	3	intron_retention	FALSE	canonical	3	69	junction_4	6.84754619472471	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTTATGATGATACCAAC	-80219515	False	NA	-15	True	AGTAAA	-26	NA	80220396	80209278	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_80212275_80213803_80213886_80214171_80214329_80214614_80214766_80215032_80215139_80217031_80217193_80220225
transcript_92301.known	chr17	+	1519	2	FSM	ENSG00000181045.15	ENST00000572652.5	1519	2	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATG	80218757	True	NA	NA	False	NA	NA	NA	80220437	80222375	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_80220497_80220915
transcript_92304.known	chr17	+	5316	17	FSM	ENSG00000173821.20	ENST00000319921.4	5316	17	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	4.2311161352532	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTAGTGTACATATTTATG	80254522	True	NA	4	True	TATAAA	-15	NA	80260869	80321463	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_80260903_80263573_80263779_80273240_80273405_80287814_80288364_80288632_80288756_80289658_80289838_80290569_80290729_80291627_80291828_80294719_80295004_80295556_80295814_80298320_80298519_80306251_80306469_80307127_80307202_80309017_80309172_80313011_80313168_80317187_80317278_80319189
transcript_92310.nic	chr17	+	624	4	ISM	ENSG00000173821.20	ENST00000508628.6	17730	69	-71	116402	-57	-13097	5prime_fragment	FALSE	canonical	2	3	junction_3	8.83176086632785	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTCCGAGTCAATAGTTT	80260749	False	NA	NA	False	NA	NA	NA	80260794	80278910	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_80260903_80263573_80263779_80273240_80273405_80278763
transcript_92314.nic	chr17	+	477	3	ISM	ENSG00000173821.20	ENST00000319921.4	5316	17	-75	48059	-57	-18603	5prime_fragment	FALSE	canonical	3	18	junction_2	3	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGCACTGCCTCGGCT	80260749	False	NA	7	True	AAGAAA	-45	NA	80260794	80273404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_80260903_80263573_80263779_80273240
transcript_92316.nnic	chr17	+	959	3	NNC	ENSG00000173821.20	novel	21079	68	NA	NA	0	-18603	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	7.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGCACTGCCTCGGCT	80254504	True	NA	7	True	AAGAAA	-45	NA	80260851	80273404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_80261442_80263573_80263779_80273240
transcript_92320.nic	chr17	+	1187	10	NIC	ENSG00000173818.17	novel	2820	10	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	25.9234390341641	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTCTCAGGATTCATT	NA	False	NA	32	True	AATAGA	-22	NA	80415146	80430341	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_80415251_80415649_80415822_80421827_80421963_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772_80429832_80430040
transcript_92321.known	chr17	+	2820	10	FSM	ENSG00000173818.17	ENST00000518137.6	2820	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	29.0903233667185	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGATTTTTTTTCTTCAG	80414434	True	NA	7	True	AATAAA	-22	NA	80415166	80438086	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_80415251_80415649_80415822_80421827_80421963_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772_80429832_80436132
transcript_92326.nic	chr17	+	1398	9	ISM	ENSG00000173818.17	ENST00000518137.6	2820	10	-20	7743	-18	0	5prime_fragment	FALSE	canonical	0	0	junction_3	26.8700576850888	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTCAGGATTCATTTT	NA	False	NA	34	True	AATAGA	-24	NA	80415146	80430343	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_80415251_80415649_80415822_80421827_80421963_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772
transcript_92330.known	chr17	+	2680	9	FSM	ENSG00000173818.17	ENST00000520367.5	2680	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_8	22.0166840146285	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGCTTGATTTTTTTTC	80414434	True	NA	2	True	AATAAA	-17	NA	80415166	80438081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_80415251_80415649_80415822_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772_80429832_80436132
transcript_92335.known	chr17	+	1226	8	FSM	ENSG00000173818.17	ENST00000323854.9	1226	8	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	12.9599067771905	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTCAGGATTCATTTT	80414451	True	NA	34	True	AATAGA	-24	NA	80415183	80430343	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_80415251_80415649_80415822_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772
transcript_92341.known	chr17	+	702	7	FSM	ENSG00000173818.17	ENST00000522577.5	702	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	28.9597421719646	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCCACAGGACCACAGCCC	80414434	True	NA	NA	False	NA	NA	NA	80415166	80429842	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_80415251_80415649_80415822_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772
transcript_92345.known	chr17	+	690	2	FSM	ENSG00000173818.17	ENST00000520537.1	690	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGTCTGGGGAGTCT	80414432	True	NA	NA	False	NA	NA	NA	80415164	80416253	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_80415251_80415649
transcript_92347.known	chr17	-	3651	2	FSM	ENSG00000263069.6	ENST00000575034.5	3651	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGACTGATGTTCTGATC	-80415026	True	NA	NA	False	AATAAA	-37	NA	80415118	80351827	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_80355289_80414928
transcript_92348.known	chr17	-	5439	5	FSM	ENSG00000171246.6	ENST00000306773.5	5439	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_4	6.81909084849293	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCTCCTCAGGATGTC	-80475585	True	NA	0	True	AGTAAA	-15	NA	80476607	80466833	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_80471035_80471731_80471912_80473199_80473445_80475510_80475719_80476002
transcript_92349.known	chr17	+	2286	9	FSM	ENSG00000141564.15	ENST00000570891.5	2286	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	6.19979838381862	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTTTTATGCTTATTTC	80542684	True	NA	NA	False	ATTAAA	-20	NA	80544876	80823620	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_80545792_80625690_80625794_80643727_80643811_80707840_80708000_80730559_80730707_80754009_80754186_80791449_80791510_80822200_80822302_80823078
transcript_92350.known	chr17	+	2499	6	FSM	ENSG00000141564.15	ENST00000649732.1	2499	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	6.49923072370877	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAAAACTTGGCCTTCCT	80542681	True	NA	NA	False	NA	NA	NA	80544873	80755098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_80545792_80625690_80625794_80643727_80643811_80707840_80708000_80730559_80730707_80754009
transcript_92356.known	chr17	+	1664	8	FSM	ENSG00000176108.9	ENST00000325167.9	1664	8	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_7	12.033965536373	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTCGTGGACTTGGGCG	80988348	True	NA	26	True	ATTAAA	-19	NA	80991840	81000133	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_80991982_80994580_80994691_80995018_80995107_80995671_80995759_80997006_80997073_80997260_80997342_80998365_80998421_80999097
transcript_92359.nic	chr17	+	2340	7	ISM	ENSG00000176108.9	ENST00000325167.9	1664	8	1	0	1	0	intron_retention	FALSE	canonical	3	237	junction_5	11.9547758936195	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTCGTGGACTTGGGCG	80988349	True	NA	26	True	ATTAAA	-19	NA	80991841	81000133	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_80991982_80994580_80994691_80995018_80995107_80995671_80995759_80997006_80997073_80997260_80997342_80998365
transcript_9236.nic	chr1	+	2709	21	NIC	ENSG00000117859.19	novel	2210	21	NA	NA	-17	-70	combination_of_known_junctions	FALSE	canonical	3	195	junction_1	118.408730674727	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGATTACAGTTTAATTAAT	51721667	True	NA	10	True	ATTAAA	-14	NA	51729790	51788394	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_51730002_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51756319_51756359_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_92360.known	chr17	-	4014	2	FSM	ENSG00000226137.5	ENST00000573167.2	4014	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAGAAAAGAAACA	-81034672	True	NA	NA	False	NA	NA	NA	81034881	81029701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81033399_81034564
transcript_92367.known	chr17	+	2229	16	FSM	ENSG00000175866.16	ENST00000575245.5	2229	16	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	30.39049559027	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGTGTGATCTGTCCGCC	81032594	False	NA	16	True	AATAAA	-16	NA	81035157	81116225	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81035309_81036862_81036962_81053667_81053744_81057880_81057968_81084831_81084894_81085653_81085726_81086442_81086581_81099927_81100081_81103501_81103724_81103906_81104109_81104513_81104716_81106077_81106147_81106744_81106908_81108474_81108510_81110913_81110956_81115769
transcript_92368.known	chr17	+	2129	15	FSM	ENSG00000175866.16	ENST00000435091.7	2129	15	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_13	21.0776020012346	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGTGTGATCTGTCCGC	81032598	False	NA	15	True	AATAAA	-15	NA	81035161	81116224	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81035309_81053667_81053744_81057880_81057968_81084831_81084894_81085653_81085726_81086442_81086581_81099927_81100081_81103501_81103724_81103906_81104109_81104513_81104716_81106077_81106147_81106744_81106908_81108474_81108510_81110913_81110960_81115769
transcript_9237.nic	chr1	+	2784	21	NIC	ENSG00000117859.19	novel	2721	20	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	195	junction_1	118.408730674727	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATCTTTTATTATCTT	51721667	True	NA	20	True	CATAAA	-29	NA	51729790	51788469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_51730002_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51756319_51756359_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_92370.known	chr17	+	2133	15	FSM	ENSG00000175866.16	ENST00000572329.5	2133	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	30.1009356421127	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	81032587	True	NA	NA	False	AAAAAG	-10	NA	81035150	81109372	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81035309_81036862_81036962_81053667_81053744_81057880_81057968_81084831_81084894_81085653_81085716_81086442_81086581_81099927_81100081_81103501_81103724_81103906_81104109_81104513_81104716_81106077_81106147_81106744_81106908_81108474_81108510_81108967
transcript_92371.nic	chr17	+	2201	15	NIC	ENSG00000175866.16	novel	2229	16	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	28.1421319703525	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGTGTGATCTGTCCGCC	NA	False	NA	16	True	AATAAA	-16	NA	81035143	81116225	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_81035309_81036862_81036962_81053667_81053744_81057880_81057968_81084831_81084894_81085653_81085726_81086442_81086581_81099927_81100081_81103501_81103724_81103906_81104109_81104513_81104716_81106077_81106147_81106744_81106908_81108474_81108510_81115769
transcript_92373.known	chr17	+	1939	14	FSM	ENSG00000175866.16	ENST00000321280.11	1939	14	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_13	17.8049923189899	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAACTGCCAGGCAGGAC	NA	False	NA	NA	False	NA	NA	NA	81035121	81109238	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81035309_81053667_81053744_81057880_81057968_81084831_81084894_81085653_81085726_81086442_81086581_81099927_81100081_81103501_81103724_81103906_81104109_81104513_81104716_81106077_81106147_81106744_81106908_81108474_81108510_81108967
transcript_92374.known	chr17	+	3304	14	FSM	ENSG00000175866.16	ENST00000428708.7	3304	14	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_13	18.0111733894243	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAAAATCACCCAACTTCC	81032587	True	NA	NA	False	AATAAA	-26	NA	81035150	81117434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81035309_81053667_81053744_81057880_81057968_81084831_81084894_81085653_81085726_81086442_81086581_81099927_81100081_81103501_81103724_81103906_81104109_81104513_81104716_81106077_81106147_81106744_81106908_81108474_81108510_81115769
transcript_92376.known	chr17	+	2512	13	FSM	ENSG00000175866.16	ENST00000575712.5	2512	13	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_9	11.8074835027057	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAAAGAAA	81032592	False	NA	NA	False	AAAAAG	-25	NA	81035155	81109387	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81035309_81053667_81053744_81057880_81057968_81084831_81084894_81085653_81085726_81086442_81086581_81099927_81100081_81103501_81103724_81103906_81104109_81104513_81104716_81106077_81106147_81106744_81106908_81108474
transcript_9238.known	chr1	+	2210	21	FSM	ENSG00000117859.19	ENST00000531828.5	2210	21	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_5	98.2993387566773	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGGAAGATGCAAAGTTTA	51721684	True	NA	-99	True	NA	NA	NA	51729807	51787789	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_51730125_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51756319_51756359_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_92381.known	chr17	-	3673	26	FSM	ENSG00000141577.14	ENST00000269392.8	3673	26	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_14	29.0149202997354	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTTGAGTGACTGCCTTG	-81220206	True	NA	-14	True	AGTAAA	-19	NA	81222999	81189595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81189844_81189914_81189976_81190638_81190803_81190906_81191085_81191192_81191336_81192317_81192393_81192475_81192594_81192735_81192844_81193925_81194128_81194869_81194973_81195834_81195952_81196700_81196827_81196929_81197056_81197711_81197889_81198105_81198298_81198876_81198972_81199380_81199550_81199718_81199836_81200328_81200447_81202239_81202399_81203493_81203608_81206743_81206872_81207124_81207240_81208927_81209023_81219879_81220074_81222768
transcript_92382.known	chr17	-	3630	26	FSM	ENSG00000141577.14	ENST00000450824.7	3630	26	0	0	0	0	multi-exon	TRUE	canonical	3	58	junction_14	26.9468810811196	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTTGAGTGACTGCCTTG	-81220172	True	NA	-14	True	AGTAAA	-19	NA	81222965	81189595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81189844_81189914_81189976_81190638_81190803_81190906_81191085_81191192_81191336_81192317_81192393_81192475_81192594_81192735_81192844_81193925_81194128_81194869_81194973_81195834_81195952_81196700_81196827_81196929_81197056_81197711_81197889_81198114_81198298_81198876_81198972_81199380_81199550_81199718_81199836_81200328_81200447_81202239_81202399_81203493_81203608_81206743_81206872_81207124_81207240_81208927_81209023_81219879_81220074_81222768
transcript_92389.nnic	chr17	-	2490	14	NNC	ENSG00000167302.11	novel	2455	13	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_13	29.1267379551045	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGCCGCTTATTTTTCT	-81237159	True	NA	-5	True	AATAAA	-19	NA	81239060	81228276	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_81229477_81230543_81230679_81231397_81231477_81231577_81231692_81231846_81232022_81232314_81232519_81233431_81233504_81233637_81233717_81233980_81234049_81236707_81236802_81236979_81237072_81237386_81237460_81237550_81237581_81238985
transcript_92397.known	chr17	-	2455	13	FSM	ENSG00000167302.11	ENST00000637944.2	2455	13	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_12	16.454271650716	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGCCGCTTATTTTTCT	-81237154	True	NA	-5	True	AATAAA	-19	NA	81239055	81228276	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81229477_81230543_81230679_81231397_81231477_81231577_81231692_81231846_81232022_81232314_81232519_81233431_81233504_81233637_81233717_81233980_81234049_81236707_81236802_81236979_81237072_81237386_81237460_81238985
transcript_92408.known	chr17	-	2287	12	FSM	ENSG00000167302.11	ENST00000300714.7	2287	12	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	23.61187542651	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGCCGCTTATTTTTCT	-81237190	True	NA	-5	True	AATAAA	-19	NA	81239091	81228276	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81229477_81230543_81230679_81231397_81231477_81231577_81231692_81231846_81232022_81233431_81233504_81233637_81233717_81233980_81234049_81236707_81236802_81236979_81237072_81237386_81237460_81238985
transcript_9241.known	chr1	+	2721	20	FSM	ENSG00000117859.19	ENST00000361556.9	2721	20	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	125.149528293689	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATCTTTTATTATCTT	51721691	True	NA	20	True	CATAAA	-29	NA	51729814	51788469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_51730002_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_92414.nic	chr17	-	2621	12	NIC	ENSG00000167302.11	novel	2455	13	NA	NA	-29	0	intron_retention	FALSE	canonical	3	48	junction_11	16.4387166457323	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGCCGCTTATTTTTCT	NA	False	NA	-5	True	AATAAA	-19	NA	81239120	81228276	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_81229477_81230543_81230679_81231397_81231692_81231846_81232022_81232314_81232519_81233431_81233504_81233637_81233717_81233980_81234049_81236707_81236802_81236979_81237072_81237386_81237460_81238985
transcript_92420.known	chr17	-	2552	11	FSM	ENSG00000167302.11	ENST00000573295.5	2552	11	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_5	24.4122919858009	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGCCGCTTATTTTTCT	-81237140	True	NA	-5	True	AATAAA	-19	NA	81239041	81228276	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81229477_81230543_81230679_81231397_81231477_81231577_81231692_81231846_81232022_81233431_81233504_81233637_81233717_81233980_81234049_81236707_81236802_81236979_81237460_81238985
transcript_92423.nic	chr17	-	2357	11	NIC	ENSG00000167302.11	novel	2287	12	NA	NA	-3	0	intron_retention	FALSE	canonical	3	24	junction_4	24.466507719738	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGCCGCTTATTTTTCT	-81237159	True	NA	-5	True	AATAAA	-19	NA	81239060	81228276	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_81229477_81230543_81230679_81231397_81231692_81231846_81232022_81233431_81233504_81233637_81233717_81233980_81234049_81236707_81236802_81236979_81237072_81237386_81237460_81238985
transcript_92436.known	chr17	+	565	3	FSM	ENSG00000224877.4	ENST00000431388.3	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	921	junction_1	61	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGGTCTTGGCCTCTC	81223514	True	NA	62	True	GGGGCT	-20	NA	81239317	81241310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81239448_81239567_81239679_81240986
transcript_92437.known	chr17	+	741	3	FSM	ENSG00000224877.4	ENST00000573090.1	741	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	456.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCGTAAACCTGAGTTAG	81223507	True	NA	-34	True	NA	NA	NA	81239310	81241214	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81239448_81239567_81239944_81240986
transcript_92438.nic	chr17	+	1311	3	NIC	ENSG00000224877.4	novel	741	3	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	45	junction_2	438	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCTGGGGCTTACTGTG	81223497	True	NA	30	True	GATAAA	-17	NA	81239300	81241278	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_81239448_81239567_81240440_81240986
transcript_92448.known	chr17	-	4491	16	FSM	ENSG00000157637.13	ENST00000374759.8	4491	16	0	0	0	0	multi-exon	TRUE	canonical	3	96	junction_2	30.7581244912986	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGAAGTTGGTCCTGGG	-81291459	True	NA	NA	False	AGTAAA	-21	NA	81295307	81244810	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81246674_81246884_81247062_81251492_81251613_81252194_81252684_81253072_81253241_81260237_81260395_81270917_81271025_81272515_81272628_81275968_81276152_81277030_81277134_81280608_81280734_81282188_81282333_81283408_81283503_81284849_81284896_81289690_81289809_81294822
transcript_9247.known	chr1	+	2755	20	FSM	ENSG00000117859.19	ENST00000462759.5	2755	20	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_5	104.851563724689	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATCTTTTATTATCTT	51721780	False	NA	20	True	CATAAA	-29	NA	51729903	51788469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_51730125_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_92470.known	chr17	-	2708	14	FSM	ENSG00000157637.13	ENST00000288439.9	2708	14	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	15.4199594010164	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTGTGATTACCATT	-81291419	True	NA	-14	True	TTTAAA	-19	NA	81295267	81251195	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81251613_81252194_81252684_81253072_81253241_81260237_81260395_81270917_81271025_81272515_81272628_81275968_81276152_81277030_81277134_81280608_81280734_81282188_81282333_81283408_81283503_81284849_81284896_81289690_81289809_81294822
transcript_92480.nic	chr17	-	3685	13	NIC	ENSG00000157637.13	novel	2708	14	NA	NA	-29	7	intron_retention	FALSE	canonical	3	178	junction_10	12.9871731591854	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCGCCCCTTGGGTCTC	-81291488	True	NA	-10	True	AATAAA	-25	NA	81295336	81250869	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_81252684_81253072_81253241_81260237_81260395_81270917_81271025_81272515_81272628_81275968_81276152_81277030_81277134_81280608_81280734_81282188_81282333_81283408_81283503_81284849_81284896_81289690_81289809_81294822
transcript_92483.nic	chr17	-	2837	13	ISM	ENSG00000157637.13	ENST00000288439.9	2708	14	-69	522	-29	-522	5prime_fragment	FALSE	canonical	3	178	junction_10	12.9871731591854	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCCACTTCCTTTTGT	-81291488	True	NA	NA	False	TATAAA	-30	NA	81295336	81251717	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_81252684_81253072_81253241_81260237_81260395_81270917_81271025_81272515_81272628_81275968_81276152_81277030_81277134_81280608_81280734_81282188_81282333_81283408_81283503_81284849_81284896_81289690_81289809_81294822
transcript_925.known	chr1	+	1748	3	FSM	ENSG00000224870.8	ENST00000448629.7	1759	3	1	10	1	0	multi-exon	FALSE	canonical	3	37	junction_1	39	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAAATTACTCTGTCTCT	1397611	True	NA	17	True	TATAAA	-10	NA	1399519	1402036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1399690_1400157_1400304_1400604
transcript_92518.known	chr17	-	977	2	FSM	ENSG00000262877.5	ENST00000662306.1	977	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCAGGGCCCAGCCCCTT	-81390309	False	NA	NA	False	NA	NA	NA	81390319	81388776	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81389324_81389889
transcript_92523.known	chr17	-	2005	7	FSM	ENSG00000184009.13	ENST00000572105.7	2005	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	6189.05972933961	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCAATGAATGGCTCCTG	-81512838	False	NA	25	True	AATAAA	-11	NA	81512851	81509977	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81510834_81510926_81511109_81511187_81511627_81511762_81511804_81511902_81512143_81512231_81512361_81512733
transcript_92528.known	chr17	-	1860	7	FSM	ENSG00000184009.13	ENST00000680227.1	1860	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6684.80634640143	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAATGAATGGCTCCTGT	-81262476	True	NA	26	True	AATAAA	-12	NA	81512776	81509976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81510330_81510478_81510834_81510926_81511109_81511187_81511627_81511902_81512143_81512231_81512361_81512614
transcript_92529.known	chr17	-	1749	7	FSM	ENSG00000184009.13	ENST00000681092.1	1749	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6587.02154281854	8903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAATGAATGGCTCCTGT	-81262500	True	NA	26	True	AATAAA	-12	NA	81512800	81509976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81510330_81510478_81510834_81510926_81511109_81511187_81511627_81511902_81512143_81512247_81512361_81512733
transcript_92531.known	chr17	-	2185	7	FSM	ENSG00000184009.13	ENST00000679778.1	2185	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6700.5223034394	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAATGAATGGCTCCTGT	-81514100	False	NA	26	True	AATAAA	-12	NA	81514113	81509976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81510330_81510478_81510834_81510926_81511109_81511187_81511627_81511902_81512143_81512231_81512361_81513626
transcript_92534.known	chr17	-	1993	7	FSM	ENSG00000184009.13	ENST00000576214.3	1993	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6463.90387717309	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAATGAATGGCTCCTGT	-81512838	False	NA	26	True	AATAAA	-12	NA	81512851	81509976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81510330_81510478_81510834_81510926_81511109_81511187_81511804_81511902_81512143_81512231_81512361_81512733
transcript_92544.known	chr17	-	1137	6	FSM	ENSG00000184009.13	ENST00000644774.2	1137	6	0	0	0	0	multi-exon	FALSE	canonical	1	104	junction_4	5583.50083728838	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGACTCAGCAGATGCGTA	-81512750	False	NA	NA	False	NA	NA	NA	81512763	81510689	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81510834_81510926_81511109_81511187_81511627_81511902_81512116_81512231_81512361_81512733
transcript_92545.known	chr17	-	1449	6	FSM	ENSG00000184009.13	ENST00000571721.6	1449	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	5682.32132143194	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGACTCAGCAGATGCGTA	-81262478	True	NA	NA	False	NA	NA	NA	81512778	81510689	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81510834_81510926_81511109_81511187_81511627_81511902_81512143_81512231_81512361_81512463
transcript_92546.known	chr17	-	2001	6	FSM	ENSG00000184009.13	ENST00000575087.5	2001	6	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_5	5692.28913531279	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTGTGTAAGGAAAAATAAA	-81262490	True	NA	-5	True	NA	NA	NA	81512790	81510007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81510834_81510926_81511109_81511187_81511627_81511902_81512143_81512231_81512361_81512605
transcript_92547.known	chr17	-	1919	6	FSM	ENSG00000184009.13	ENST00000573283.7	1919	6	0	0	0	0	multi-exon	FALSE	canonical	3	11942	junction_5	1010.68471839639	13444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGGCTCCTGTTTGGGG	-81262499	True	NA	32	True	AATAAA	-18	NA	81512799	81509970	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81510834_81510926_81511109_81511187_81511627_81511902_81512143_81512231_81512361_81512733
transcript_92552.known	chr17	-	2141	6	FSM	ENSG00000184009.13	ENST00000679535.1	2141	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	5511.97106668749	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCAATGAATGGCTCCTG	-81512838	False	NA	25	True	AATAAA	-11	NA	81512851	81509977	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81510834_81510926_81511109_81511187_81511804_81511902_81512143_81512231_81512361_81512733
transcript_92559.known	chr17	-	1895	6	FSM	ENSG00000184009.13	ENST00000679410.1	1895	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5525.37958877035	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAATGAATGGCTCCTGT	-81512838	False	NA	26	True	AATAAA	-12	NA	81512851	81509976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81510330_81510478_81510834_81510926_81511627_81511902_81512143_81512231_81512361_81512733
transcript_92569.known	chr17	-	2241	5	FSM	ENSG00000184009.13	ENST00000574671.6	2241	5	0	0	0	0	multi-exon	FALSE	canonical	3	11942	junction_4	1082.29694977857	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAATGAATGGCTCCTGT	-81512838	False	NA	26	True	AATAAA	-12	NA	81512851	81509976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81510834_81510926_81511109_81511187_81512143_81512231_81512361_81512733
transcript_92570.known	chr17	-	1958	5	FSM	ENSG00000184009.13	ENST00000576917.5	1958	5	0	0	0	0	multi-exon	FALSE	canonical	3	11942	junction_4	1081.79226286751	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGTGCTGCCGTAACCA	-81262480	True	NA	11	True	NA	NA	NA	81512780	81509991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81510834_81510926_81511627_81511902_81512143_81512231_81512361_81512733
transcript_92596.known	chr17	-	1842	6	FSM	ENSG00000184009.13	ENST00000680727.1	1842	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5697.07372604568	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAATGAATGGCTCCTGT	-81512491	False	NA	26	True	AATAAA	-12	NA	81512504	81509976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81510330_81510478_81510834_81510926_81511109_81511187_81511627_81511902_81512143_81512231
transcript_92597.known	chr17	-	2256	5	FSM	ENSG00000184009.13	ENST00000575842.5	2256	5	0	0	0	0	multi-exon	FALSE	canonical	3	13369	junction_4	509.754352605252	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGCTGCCGTAACCAATG	-81262481	True	NA	14	True	NA	NA	NA	81512781	81509988	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81510834_81510926_81511109_81511187_81511627_81511902_81512143_81512231
transcript_92598.known	chr17	-	1859	7	FSM	ENSG00000184009.13	ENST00000681842.1	1859	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5205.25132278292	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGGCTCCTGTTTGGGG	-81512834	False	NA	32	True	AATAAA	-18	NA	81512847	81509970	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81510288_81510395_81510834_81510926_81511109_81511187_81511627_81511902_81512143_81512231_81512361_81512733
transcript_9260.known	chr1	-	3895	33	FSM	ENSG00000078618.23	ENST00000354831.11	3895	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	300.351238071258	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGTTTGTATTTTATG	-51878751	False	NA	-3	True	AATAAA	-45	NA	51878805	51789190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_51789434_51789567_51789658_51790532_51790650_51790899_51790991_51791577_51791662_51792045_51792099_51792376_51792425_51794471_51794611_51794822_51794855_51798248_51798412_51800555_51800684_51803813_51803965_51805509_51805562_51806793_51806914_51809314_51809402_51810280_51810405_51811993_51812099_51814034_51814090_51814550_51814610_51814692_51814814_51816311_51816390_51818065_51818136_51819799_51819874_51821497_51821556_51823663_51823787_51825286_51825383_51827795_51827870_51834016_51834171_51836130_51836213_51836368_51836439_51837486_51837621_51840225_51840515_51878274
transcript_92615.known	chr17	-	3597	9	FSM	ENSG00000185504.17	ENST00000327787.13	3597	9	0	0	0	0	multi-exon	FALSE	canonical	1	72	junction_7	75.1156400159115	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCAGGCCTCGGCTGTTT	-81550476	True	NA	-7	True	NA	NA	NA	81552353	81539890	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81540951_81541308_81541396_81544003_81544121_81545745_81545883_81546908_81547679_81549205_81549363_81550247_81551204_81551927_81552053_81552165
transcript_92616.known	chr17	-	3822	9	FSM	ENSG00000185504.17	ENST00000443656.6	3822	9	0	0	0	0	multi-exon	FALSE	canonical	1	41	junction_7	79.984373473823	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTCGGCTGTTTTCTCTC	-81550499	True	NA	-1	True	NA	NA	NA	81552376	81539884	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81540951_81541308_81541396_81544003_81544121_81545745_81545883_81546908_81547679_81549205_81549363_81550247_81551204_81551731_81552053_81552165
transcript_92618.known	chr17	-	4381	17	FSM	ENSG00000182446.14	ENST00000331134.11	4381	17	0	0	0	0	multi-exon	FALSE	canonical	3	505	junction_3	40.6877880174138	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGGTCCTGGTGTGTC	-81632361	True	NA	-8	True	AATAAA	-15	NA	81637112	81556886	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81559417_81565504_81565608_81567416_81567534_81569015_81569112_81572016_81572089_81588943_81589105_81596115_81596243_81597244_81597317_81600340_81600428_81604547_81604728_81606690_81606815_81608727_81608823_81610209_81610259_81613317_81613495_81622165_81622279_81629724_81629806_81636915
transcript_92634.known	chr17	+	1837	4	FSM	ENSG00000182612.10	ENST00000574882.5	1837	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	3.74165738677394	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGCAGCGTAGGGAATTC	81636982	True	NA	34	True	AGTAAA	-14	NA	81637197	81648748	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81637407_81642306_81642449_81644991_81645630_81647900
transcript_92636.known	chr17	-	458	4	FSM	ENSG00000185527.12	ENST00000571004.1	458	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	1.24721912892465	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGATGGGACTGCAACCT	-81653306	True	NA	NA	False	NA	NA	NA	81653694	81650962	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81651151_81651644_81651686_81653159_81653365_81653670
transcript_92637.known	chr17	-	803	2	FSM	ENSG00000204237.5	ENST00000571503.1	803	2	0	0	0	0	multi-exon	FALSE	canonical	2	32	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGAAGAATTAGTTACTGA	-81662522	True	NA	-66	True	NA	NA	NA	81666595	81665100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81665585_81666276
transcript_92638.known	chr17	-	637	2	FSM	ENSG00000204237.5	ENST00000374741.4	637	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTGTTTTGGGGGTGG	-81662532	True	NA	-1	True	AATAAA	-24	NA	81666605	81665035	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81665585_81666517
transcript_92639.known	chr17	-	553	2	FSM	ENSG00000204237.5	ENST00000571092.1	553	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGGTGGGCTCCCAAGCA	-81662505	True	NA	NA	False	NA	NA	NA	81666578	81665460	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81665585_81666149
transcript_92640.known	chr17	-	678	2	FSM	ENSG00000204237.5	ENST00000573786.1	678	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGGTGGTTTCACAGGA	-81662073	False	NA	-21	True	AATAAA	-4	NA	81666146	81665055	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81665585_81665997
transcript_92641.known	chr17	-	1600	1	FSM	ENSG00000204237.5	ENST00000575963.1	1600	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTGTTTTGGGGGTGG	-81662562	True	NA	-1	True	AATAAA	-24	NA	81666635	81665035	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81665000_81666600
transcript_92642.known	chr17	+	890	7	FSM	ENSG00000185298.13	ENST00000574107.1	890	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	157.011323017022	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGAGCCGCAGCTGTGAT	81661454	True	NA	NA	False	NA	NA	NA	81666754	81672685	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81666901_81667728_81667863_81670001_81670029_81670224_81670454_81671743_81671827_81672075_81672156_81672494
transcript_92645.known	chr17	+	2095	6	FSM	ENSG00000185298.13	ENST00000329214.13	2095	6	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_1	16.4438438328756	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTTAAATTGGAGAATATA	81661436	True	NA	17	True	ATTAAA	-20	NA	81666736	81673899	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81666901_81667728_81667863_81670224_81670454_81671743_81671827_81672075_81672156_81672494
transcript_92647.nic	chr17	+	1711	6	NIC	ENSG00000185298.13	novel	2095	6	NA	NA	0	-491	intron_retention	FALSE	canonical	3	26	junction_1	127.398587119324	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGGGAACAGAGTTGTCA	81661436	True	NA	NA	False	AATACA	-16	NA	81666736	81673408	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_81667008_81667728_81667863_81670224_81670454_81671743_81671827_81672075_81672156_81672494
transcript_92648.nic	chr17	+	2202	6	NIC	ENSG00000185298.13	novel	2095	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	26	junction_1	127.398587119324	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTTAAATTGGAGAATATA	81661436	True	NA	17	True	ATTAAA	-20	NA	81666736	81673899	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_81667008_81667728_81667863_81670224_81670454_81671743_81671827_81672075_81672156_81672494
transcript_92654.known	chr17	+	437	3	FSM	ENSG00000185298.13	ENST00000574200.1	437	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	169.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGTTCAAACAGAGGAAGG	81661471	True	NA	NA	False	NA	NA	NA	81666771	81670291	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81667008_81667728_81667863_81670224
transcript_92667.known	chr17	+	2978	23	FSM	ENSG00000185359.14	ENST00000678105.1	2978	23	0	0	0	0	multi-exon	FALSE	canonical	2	33	junction_1	204.076229478145	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATCAGCGTTTTTTCTT	81674279	True	NA	12	True	AATAAA	-13	NA	81683999	81702116	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81684104_81684812_81684892_81685604_81685690_81686311_81686388_81687002_81687096_81688703_81688828_81690181_81690235_81690673_81690743_81691446_81691572_81693502_81693582_81693653_81693753_81693869_81693966_81694814_81694854_81694923_81695068_81695163_81695224_81695785_81696000_81696356_81696530_81696606_81696748_81696823_81696999_81700466_81700601_81700694_81700815_81701044_81701132_81701507
transcript_92671.known	chr17	+	3109	23	FSM	ENSG00000185359.14	ENST00000676729.1	3109	23	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_2	205.275510287922	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATCAGCGTTTTTTCTT	81674326	True	NA	12	True	AATAAA	-13	NA	81684046	81702116	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81684104_81684812_81685070_81685604_81685690_81686311_81686388_81687002_81687096_81688703_81688828_81690181_81690235_81690673_81690743_81691446_81691572_81693502_81693582_81693653_81693753_81693869_81693966_81694814_81694854_81694923_81695068_81695163_81695224_81695785_81696000_81696356_81696530_81696606_81696748_81696823_81696999_81700466_81700601_81700694_81700815_81701044_81701132_81701507
transcript_92683.known	chr17	+	3013	22	FSM	ENSG00000185359.14	ENST00000678196.1	3013	22	0	0	0	0	multi-exon	TRUE	canonical	2	35	junction_21	161.109095303677	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGCCCTCTGGCCGCA	81683945	False	NA	NA	False	NA	NA	NA	81683962	81701929	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81684104_81685604_81685690_81686311_81686388_81687002_81687096_81688703_81688828_81690181_81690235_81690673_81690743_81691446_81691572_81693502_81693582_81693653_81693753_81693869_81693966_81694814_81694854_81694923_81695068_81695163_81695224_81695785_81696000_81696356_81696530_81696606_81696748_81696823_81696999_81700466_81700601_81700694_81700815_81701044_81701132_81701243
transcript_92684.known	chr17	+	2893	22	FSM	ENSG00000185359.14	ENST00000329138.9	2893	22	0	0	0	0	multi-exon	FALSE	canonical	2	425	junction_17	78.996455042597	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCGTTTTTTCTTTAATT	81674290	True	NA	17	True	AATAAA	-18	NA	81684010	81702121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81684104_81685604_81685690_81686311_81686388_81687002_81687096_81688703_81688828_81690181_81690235_81690673_81690743_81691446_81691572_81693502_81693582_81693653_81693753_81693869_81693966_81694814_81694854_81694923_81695068_81695163_81695224_81695785_81696000_81696356_81696530_81696606_81696748_81696823_81696999_81700466_81700601_81700694_81700815_81701044_81701132_81701507
transcript_92685.known	chr17	+	2895	22	FSM	ENSG00000185359.14	ENST00000677243.1	2895	22	0	0	0	0	multi-exon	TRUE	canonical	2	87	junction_21	151.429664566285	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATTTCAGAAAGCATCAG	81683945	False	NA	1	True	AATAAA	-2	NA	81683962	81702105	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81684104_81685604_81685690_81686311_81686388_81687002_81687096_81688703_81688828_81690181_81690235_81690673_81690743_81691446_81691572_81693502_81693582_81693653_81693753_81693869_81693966_81694814_81694854_81694923_81695068_81695163_81695224_81695785_81696000_81696356_81696530_81696606_81696748_81696823_81696999_81700466_81700601_81700694_81700815_81701044_81701132_81701537
transcript_9269.known	chr1	-	3594	31	FSM	ENSG00000078618.23	ENST00000352171.12	3594	31	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	202.456700446183	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATGTGTATTTTAAAATG	-51860301	True	NA	-22	True	AATAAA	-26	NA	51878727	51789209	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_51789434_51789567_51789658_51790532_51790650_51790899_51790991_51791577_51791662_51792045_51792099_51792376_51792425_51794471_51794611_51794822_51794855_51798248_51798412_51800555_51800684_51803813_51803965_51805509_51805562_51806793_51806914_51809314_51809402_51810280_51810405_51811993_51812099_51814034_51814090_51814550_51814610_51814692_51814814_51816311_51816390_51818065_51818136_51819799_51819874_51821497_51821556_51823663_51823787_51825286_51825383_51827795_51827870_51834016_51834171_51836130_51836213_51840225_51840515_51878274
transcript_92692.known	chr17	+	2900	22	FSM	ENSG00000185359.14	ENST00000677109.1	2900	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	168.31280941764	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATCAGCGTTTTTTCTT	81683945	False	NA	12	True	AATAAA	-13	NA	81683962	81702116	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81684104_81685604_81685690_81686311_81686388_81687002_81687096_81688703_81688828_81690181_81690235_81690673_81690743_81691446_81691572_81693502_81693582_81693653_81693753_81693869_81693966_81694814_81694854_81694959_81695068_81695163_81695224_81695785_81696000_81696356_81696530_81696606_81696748_81696823_81696999_81700466_81700601_81700694_81700815_81701044_81701132_81701507
transcript_92700.known	chr17	+	2830	22	FSM	ENSG00000185359.14	ENST00000677225.1	2830	22	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_4	162.481158858887	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATCAGCGTTTTTTCTT	81674300	True	NA	12	True	AATAAA	-13	NA	81684020	81702116	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81684104_81685604_81685690_81686311_81686388_81687002_81687096_81688751_81688828_81690181_81690235_81690673_81690743_81691446_81691572_81693502_81693582_81693653_81693753_81693869_81693966_81694814_81694854_81694923_81695068_81695163_81695224_81695785_81696000_81696356_81696530_81696606_81696748_81696823_81696999_81700466_81700601_81700694_81700815_81701044_81701132_81701507
transcript_92717.known	chr17	+	3293	21	FSM	ENSG00000185359.14	ENST00000678115.1	3293	21	0	0	0	0	multi-exon	FALSE	canonical	2	425	junction_16	80.8111997188508	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATCAGCGTTTTTTCTT	81683945	False	NA	12	True	AATAAA	-13	NA	81683962	81702116	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81684104_81685604_81685690_81686311_81686388_81687002_81687096_81688703_81688828_81690181_81690235_81690673_81690743_81691446_81691572_81693502_81693582_81693653_81693753_81693869_81693966_81694814_81694854_81694923_81695068_81695163_81695224_81695785_81696530_81696606_81696748_81696823_81696999_81700466_81700601_81700694_81700815_81701044_81701132_81701507
transcript_9273.nnic	chr1	-	3524	30	NIC	ENSG00000078618.23	novel	3594	31	NA	NA	18	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	257.803282948778	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATGTGTATTTTAAAATG	-51860327	True	NA	-22	True	AATAAA	-26	NA	51878753	51789209	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_51789434_51789567_51789658_51790532_51790650_51790899_51790991_51791577_51791662_51792045_51792099_51792376_51792425_51794471_51794611_51794822_51794855_51798248_51798412_51800555_51800684_51803813_51803965_51805509_51805562_51806793_51806914_51809314_51809402_51810280_51810405_51811993_51812099_51814034_51814090_51814550_51814610_51814692_51814814_51816311_51816390_51818065_51818136_51819799_51819874_51821497_51821556_51823663_51823787_51827795_51827870_51834016_51834171_51836130_51836213_51840225_51840515_51878274
transcript_92738.known	chr17	+	2840	21	FSM	ENSG00000185359.14	ENST00000676478.1	2840	21	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_5	167.25103886075	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATCAGCGTTTTTTCTT	81674285	True	NA	12	True	AATAAA	-13	NA	81684005	81702116	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81684104_81685604_81685690_81686311_81686388_81687002_81687096_81688703_81688828_81690673_81690743_81691446_81691572_81693502_81693582_81693653_81693753_81693869_81693966_81694814_81694854_81694923_81695068_81695163_81695224_81695785_81696000_81696356_81696530_81696606_81696748_81696823_81696999_81700466_81700601_81700694_81700815_81701044_81701132_81701507
transcript_928.known	chr1	+	2196	2	FSM	ENSG00000224870.8	ENST00000418833.2	2196	2	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCAAACAAACTGCAAATTA	1397621	True	NA	7	True	GATAAA	-12	NA	1399529	1402026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1400304_1400604
transcript_92802.known	chr17	+	2415	18	FSM	ENSG00000185359.14	ENST00000679275.1	2415	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	185.741104189318	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGTACAGCGATAATAAAAT	81674300	True	NA	-18	True	NA	NA	NA	81684020	81702086	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81684104_81685604_81685690_81686311_81686388_81687002_81687096_81688703_81688828_81690181_81690235_81693930_81693966_81694814_81694854_81694923_81695068_81695163_81695224_81695785_81696000_81696356_81696530_81696606_81696748_81696823_81696999_81700466_81700601_81700694_81700815_81701044_81701132_81701507
transcript_92822.known	chr17	+	1004	8	FSM	ENSG00000185359.14	ENST00000576498.5	1004	8	0	0	0	0	multi-exon	FALSE	canonical	3	690	junction_7	32.9582295938235	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTTGTTTGCATTTC	81674263	True	NA	NA	False	NA	NA	NA	81683983	81691830	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81684104_81685604_81685690_81686311_81686388_81687002_81687096_81688703_81688828_81690181_81690235_81690673_81690743_81691446
transcript_92828.known	chr17	-	1087	5	FSM	ENSG00000214087.9	ENST00000622299.5	1087	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	208.941379338799	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCAGACTGGATGAGCAG	-81674555	True	NA	-45	True	AATAAA	-15	NA	81683797	81681186	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81681880_81682033_81682150_81683012_81683127_81683535_81683595_81683692
transcript_92831.known	chr17	-	694	4	FSM	ENSG00000214087.9	ENST00000576135.5	694	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	225.161176839071	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGGCTCACACCTGTAAT	-81674426	True	NA	NA	False	AAAAAG	-20	NA	81683668	81681491	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81681880_81682033_81682150_81683012_81683127_81683592
transcript_92834.known	chr17	-	1856	4	FSM	ENSG00000214087.9	ENST00000570910.1	1856	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	235.740441069316	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAATATAAGAAATAA	-81674496	True	NA	-80	True	NA	NA	NA	81683738	81681221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81681880_81682033_81683127_81683535_81683595_81683692
transcript_92837.known	chr17	-	869	3	FSM	ENSG00000214087.9	ENST00000573392.5	869	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	262.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAAACCTGTCCCCA	-81674424	True	NA	-59	True	AATAAA	-1	NA	81683666	81681200	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81681880_81682033_81682150_81683592
transcript_92838.known	chr17	-	2343	3	FSM	ENSG00000214087.9	ENST00000577142.1	2343	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	264.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCAGACTGGATGAGCAG	-81674539	True	NA	-45	True	AATAAA	-15	NA	81683781	81681186	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81681880_81682033_81683595_81683692
transcript_92840.known	chr17	-	1977	1	FSM	ENSG00000262049.1	ENST00000575312.1	1977	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCGGATGCGCGTATCTG	-81702862	True	NA	NA	False	AGTAAA	-23	NA	81703300	81701323	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81701300_81703300
transcript_92843.known	chr17	+	1523	12	FSM	ENSG00000183048.12	ENST00000574129.5	1523	12	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	122.46443234704	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGCTGGCAGCTCCTCAGG	81709971	True	NA	NA	False	NA	NA	NA	81712263	81720328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81712520_81713261_81713507_81714952_81715073_81715477_81715593_81715692_81715742_81716008_81716051_81716811_81716856_81717001_81717073_81717398_81717492_81717783_81717862_81719830_81719888_81719975
transcript_92847.known	chr17	+	1946	11	FSM	ENSG00000183048.12	ENST00000331531.9	1946	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	101.589369522603	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGTTCCTGCCTGCGCT	81710014	True	NA	16	True	AATAAA	-16	NA	81712306	81721012	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81712520_81714952_81715073_81715477_81715593_81715692_81715742_81716008_81716051_81716811_81716856_81717001_81717073_81717398_81717492_81717756_81717862_81719830_81719888_81719975
transcript_92848.known	chr17	+	1942	11	FSM	ENSG00000183048.12	ENST00000350690.10	1942	11	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_7	11.0435501538228	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGTTCCTGCCTGCGCT	81709991	True	NA	16	True	AATAAA	-16	NA	81712283	81721012	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81712520_81714952_81715073_81715477_81715593_81715692_81715742_81716008_81716051_81716811_81716856_81717001_81717073_81717398_81717492_81717783_81717862_81719830_81719888_81719975
transcript_92851.known	chr17	+	1911	11	FSM	ENSG00000183048.12	ENST00000545862.5	1911	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	103.678155847797	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCCTGCCTGCGCTGCCT	81712223	False	NA	20	True	AATAAA	-20	NA	81712235	81721016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81712520_81714952_81715073_81715477_81715593_81715692_81715742_81716008_81716051_81716811_81716856_81717001_81717073_81717481_81717492_81717783_81717862_81719830_81719888_81719975
transcript_92863.known	chr17	+	1009	5	FSM	ENSG00000262814.8	ENST00000333676.8	1009	5	0	0	0	0	multi-exon	FALSE	canonical	3	1205	junction_1	33.5596483890997	1472	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGGAGTGCCGTGCTC	81680667	True	NA	31	True	AATACA	-13	NA	81703366	81707517	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81703576_81704243_81704431_81704632_81704717_81706905_81707041_81707123
transcript_92864.known	chr17	-	925	6	FSM	ENSG00000225663.8	ENST00000538396.5	925	6	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_1	210.814041278089	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGCCTCTTGGTGGTCTG	-81823993	True	NA	-12	True	AATAAA	-16	NA	81833291	81822416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81822908_81823208_81823312_81823411_81823514_81824286_81824406_81824498_81824555_81833237
transcript_92866.known	chr17	-	618	6	FSM	ENSG00000225663.8	ENST00000575061.2	618	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	461.085415080547	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGCGTGACTGACGGCTG	-81823958	True	NA	NA	False	NA	NA	NA	81833256	81823125	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81823312_81823411_81823514_81824286_81824406_81824498_81824555_81826379_81826516_81833237
transcript_92867.known	chr17	-	1282	5	FSM	ENSG00000225663.8	ENST00000455127.7	1282	5	0	0	0	0	multi-exon	FALSE	canonical	3	623	junction_4	141.046756432043	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCGGGCAGGGCTGGAA	-81823993	True	NA	44	True	NA	NA	NA	81833291	81822360	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81823312_81823411_81823514_81824286_81824406_81824498_81824555_81833237
transcript_92868.known	chr17	-	1123	4	FSM	ENSG00000225663.8	ENST00000573478.5	1123	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	372.786206230268	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGCACTGGGCGTGGCCT	-81824004	True	NA	-24	True	AATAAA	-4	NA	81833302	81822428	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81823312_81824286_81824406_81824498_81824555_81833237
transcript_92874.known	chr17	-	2253	11	FSM	ENSG00000185624.16	ENST00000570907.6	2253	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	709.850582869381	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTGCCAGCCCTGGGGC	-81827732	True	NA	NA	False	NA	NA	NA	81860515	81843430	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81844093_81845143_81845231_81845459_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
transcript_92875.known	chr17	-	2451	11	FSM	ENSG00000185624.16	ENST00000680226.1	2451	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	695.556352857193	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCCTTGCCTCGGGTTT	-81827710	True	NA	-6	True	AATAAA	-16	NA	81860493	81843162	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845817_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
transcript_92876.known	chr17	-	2377	11	FSM	ENSG00000185624.16	ENST00000680914.1	2377	11	0	0	0	0	multi-exon	FALSE	canonical	1	51	junction_6	697.501541216935	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTGTCCTTGCCTCGGG	-81827752	True	NA	-9	True	AATAAA	-13	NA	81860535	81843165	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847013_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
transcript_92878.known	chr17	-	3217	11	FSM	ENSG00000185624.16	ENST00000680416.1	3217	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	701.163062347126	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTTGCCTCGGGTTTAT	-81827841	True	NA	-4	True	AATAAA	-18	NA	81860624	81843160	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81858494_81859388_81860326
transcript_9288.known	chr1	-	3819	31	NNC	ENSG00000078618.23	novel	3594	31	NA	NA	-132	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	255.872539883956	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGTTTGTTTGTATT	-51878883	True	NA	-8	True	AATAAA	-40	NA	51878937	51789195	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_51789434_51789567_51789658_51790532_51790650_51790899_51790991_51791577_51791662_51792045_51792099_51792376_51792426_51794471_51794611_51794822_51794855_51798248_51798412_51800555_51800684_51803813_51803965_51805509_51805562_51806793_51806914_51809314_51809402_51810280_51810405_51811993_51812099_51814034_51814090_51814550_51814610_51814692_51814814_51816311_51816390_51818065_51818136_51819799_51819874_51821497_51821556_51823663_51823787_51825286_51825383_51827795_51827870_51834016_51834171_51836130_51836213_51840225_51840515_51878274
transcript_92881.known	chr17	-	2785	11	FSM	ENSG00000185624.16	ENST00000680909.1	2785	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	710.675235251658	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTACAGCACGGCCTGT	-81827752	True	NA	NA	False	NA	NA	NA	81860535	81843333	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81859810
transcript_92882.known	chr17	-	2555	11	FSM	ENSG00000185624.16	ENST00000681485.1	2555	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	938.333847838817	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATTTCACAATCGAATTG	-81860256	False	NA	-60	True	NA	NA	NA	81860266	81843216	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847069_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81859884
transcript_92884.known	chr17	-	2469	11	FSM	ENSG00000185624.16	ENST00000681031.1	2469	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	710.675235251658	5885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTGAACACATTGGCCAAA	-81827830	True	NA	-45	True	NA	NA	NA	81860613	81843201	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860336
transcript_92885.known	chr17	-	2218	11	FSM	ENSG00000185624.16	ENST00000681933.1	2218	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	928.642213126239	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTGGGGCCCGGCACAG	-81827807	True	NA	NA	False	NA	NA	NA	81860590	81843421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859178_81859388_81860346
transcript_92886.known	chr17	-	2386	11	FSM	ENSG00000185624.16	ENST00000680400.1	2386	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_10	709.790926963708	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTGTCCTTGCCTCGGG	-81860846	False	NA	-9	True	AATAAA	-13	NA	81860856	81843165	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860698
transcript_92888.known	chr17	-	2471	11	FSM	ENSG00000185624.16	ENST00000679889.1	2471	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	925.581012121576	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATTTTACCACCTGTCCT	-81827697	True	NA	-18	True	AATAAA	-4	NA	81860480	81843174	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847069_81847242_81847348_81855141_81855280_81855452_81855689_81859180_81859388_81860326
transcript_92891.known	chr17	-	2371	11	FSM	ENSG00000185624.16	ENST00000680593.1	2371	11	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	698.641259875195	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTGTCCTTGCCTCGGG	-81827752	True	NA	-9	True	AATAAA	-13	NA	81860535	81843165	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81844093_81845143_81845231_81845626_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
transcript_92893.known	chr17	-	2510	11	FSM	ENSG00000185624.16	ENST00000681420.1	2510	11	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_2	705.130122743313	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTGTCCTTGCCTCGGG	-81827752	True	NA	-9	True	AATAAA	-13	NA	81860535	81843165	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81844093_81845143_81845304_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
transcript_92895.known	chr17	-	2309	10	FSM	ENSG00000185624.16	ENST00000681161.1	2309	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	734.749692828184	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCCTTGCCTCGGGTTT	-81827828	True	NA	-6	True	AATAAA	-16	NA	81860611	81843162	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81860326
transcript_92896.known	chr17	-	2299	10	FSM	ENSG00000185624.16	ENST00000439918.7	2299	10	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_8	730.725058494035	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAACACATTGGCCAAATAA	-81827779	True	NA	-42	True	NA	NA	NA	81860562	81843198	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81859178_81859388_81860326
transcript_92898.known	chr17	-	1989	10	FSM	ENSG00000185624.16	ENST00000680732.1	1989	10	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_8	728.556275735499	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATCATGGCTCTTGCAT	-81827786	True	NA	NA	False	NA	NA	NA	81860569	81843513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81859180_81859388_81860326
transcript_929.known	chr1	+	2228	1	FSM	ENSG00000224870.8	ENST00000572242.1	2228	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGCAAATTACTCTGTC	1397897	False	NA	14	True	TATAAA	-7	NA	1399805	1402033	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1399800_1402000
transcript_92900.known	chr17	-	2288	10	FSM	ENSG00000185624.16	ENST00000576390.6	2288	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	731.653851233417	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCACCTGTCCTTGCCTCG	-81827726	True	NA	-11	True	AATAAA	-11	NA	81860509	81843167	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
transcript_92901.known	chr17	-	2609	10	FSM	ENSG00000185624.16	ENST00000681566.1	2609	10	0	0	0	0	multi-exon	FALSE	canonical	1	37	junction_5	720.066166369881	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCACCTGTCCTTGCCTC	-81827803	True	NA	-12	True	AATAAA	-10	NA	81860586	81843168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81844093_81845143_81845231_81845560_81845992_81846428_81846630_81846946_81847069_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
transcript_92905.known	chr17	-	2711	10	FSM	ENSG00000185624.16	ENST00000679366.1	2711	10	0	0	0	0	multi-exon	FALSE	canonical	1	37	junction_5	738.43454702967	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCGAATTGAACACATTGG	-81827741	True	NA	-50	True	NA	NA	NA	81860524	81843206	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81844093_81845143_81845743_81845870_81845992_81846428_81846630_81846946_81847069_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
transcript_92907.known	chr17	-	2280	10	FSM	ENSG00000185624.16	ENST00000679439.1	2280	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	734.763017140918	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACATTGGCCAAATAAAGTT	-81827711	True	NA	-38	True	NA	NA	NA	81860494	81843194	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81844093_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
transcript_92910.known	chr17	-	2157	9	FSM	ENSG00000185624.16	ENST00000415593.6	2157	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	774.300722829961	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTACCACCTGTCCTT	-81827750	True	NA	-17	True	AATAAA	-5	NA	81860533	81843173	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81859178_81859388_81860326
transcript_92913.known	chr17	-	2907	9	FSM	ENSG00000185624.16	ENST00000680208.1	2907	9	0	0	0	0	multi-exon	FALSE	canonical	3	2166	junction_5	107.603366002184	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTGGCCAAATAAAGTTG	-81827792	True	NA	-37	True	NA	NA	NA	81860575	81843193	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81844093_81845143_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
transcript_92919.known	chr17	-	886	7	FSM	ENSG00000141522.12	ENST00000584461.5	886	7	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	309.399103999277	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACGTGGGGTGTGCTGCTG	-81852246	True	NA	NA	False	NA	NA	NA	81871329	81868259	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81868585_81868988_81869076_81869172_81869237_81869329_81869407_81869541_81869626_81869740_81869958_81871297
transcript_92921.known	chr17	-	815	7	FSM	ENSG00000141522.12	ENST00000583868.5	815	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	359.250144977934	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAGGCCGCAGCCAGGCC	-81852254	True	NA	NA	False	NA	NA	NA	81871337	81868630	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81868944_81869055_81869076_81869172_81869237_81869329_81869407_81869541_81869626_81869740_81869958_81871297
transcript_92923.nnic	chr17	-	2640	7	NNC	ENSG00000141522.12	novel	1837	6	NA	NA	-840	0	intron_retention	FALSE	non_canonical	0	0	junction_1	368.017209742515	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGGGTGTCTGCTGCTT	NA	False	NA	-18	True	AATAAA	-14	NA	81872218	81867720	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_81868970_81869047_81869076_81869172_81869237_81869329_81869407_81869541_81869626_81869740_81869958_81871297
transcript_92926.known	chr17	-	1517	6	FSM	ENSG00000141522.12	ENST00000541078.6	1517	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	391.16001840679	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGCCTCTAACTCCCTGT	-81851891	False	NA	NA	False	NA	NA	NA	81870974	81868339	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81869076_81869172_81869237_81869329_81869407_81869541_81869626_81869740_81869958_81870635
transcript_92927.known	chr17	-	1837	6	FSM	ENSG00000141522.12	ENST00000269321.12	1837	6	0	0	0	0	multi-exon	FALSE	canonical	3	847	junction_5	78.8938527389809	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGGGTGTCTGCTGCTT	-81852254	True	NA	-18	True	AATAAA	-14	NA	81871337	81867720	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81869076_81869172_81869237_81869329_81869407_81869541_81869626_81869740_81869958_81871297
transcript_92930.known	chr17	-	823	5	FSM	ENSG00000141522.12	ENST00000582984.5	823	5	0	0	0	0	multi-exon	FALSE	canonical	3	847	junction_4	85.8268605973678	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAGGCGGGCAGGGCAGA	-81852254	True	NA	NA	False	NA	NA	NA	81871337	81868869	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81869076_81869172_81869237_81869329_81869626_81869740_81869958_81871297
transcript_92932.known	chr17	-	2682	1	FSM	ENSG00000263731.1	ENST00000582866.1	2682	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTCTTTTCTGTATGA	-81881091	False	NA	-2	True	AATAAA	-20	NA	81881106	81878424	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81878400_81881100
transcript_92934.known	chr17	-	1765	14	FSM	ENSG00000185813.11	ENST00000538721.6	1765	14	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_8	102.630318368992	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTTCCTTCCCGGCAGC	-81907500	True	NA	-35	True	AAAACA	-4	NA	81911406	81904342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81904945_81905065_81905155_81905381_81905448_81905669_81905736_81906099_81906178_81906463_81906547_81906759_81906899_81907203_81907258_81907553_81907599_81907772_81907858_81908567_81908635_81908875_81909038_81909513_81909603_81911266
transcript_9294.nic	chr1	-	2731	11	ISM	ENSG00000078618.23	ENST00000352171.12	3594	31	-43	25965	1	754	5prime_fragment	FALSE	canonical	3	738	junction_9	65.9818914551561	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAGCAAAATGCTTTCCA	-51860344	True	NA	NA	False	ATTAAA	-27	NA	51878770	51815174	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_51816390_51818065_51818136_51819799_51819874_51821497_51821556_51823663_51823787_51825286_51825383_51827795_51827870_51834016_51834171_51836130_51836213_51840225_51840515_51878274
transcript_92947.known	chr17	-	5089	13	FSM	ENSG00000185813.11	ENST00000538936.7	5089	13	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_7	18.5037533730022	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGAGTCCTGTCTCTCTA	-81907493	True	NA	1	True	AATAAA	-21	NA	81911399	81900957	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81904945_81905065_81905155_81905381_81905448_81905669_81905736_81906099_81906178_81906463_81906547_81906759_81906899_81907553_81907599_81907772_81907858_81908567_81908635_81908875_81909038_81909513_81909603_81911266
transcript_92950.known	chr17	-	1474	13	FSM	ENSG00000185813.11	ENST00000570388.5	1474	13	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_11	76.6628169323304	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCCCCCTGCTCTGCTTC	-81907448	True	NA	NA	False	NA	NA	NA	81911354	81904811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81904945_81905065_81905155_81905381_81905448_81905669_81905736_81906099_81906178_81906463_81906547_81906759_81906899_81907553_81907599_81907772_81907858_81908567_81908635_81908875_81909322_81909513_81909603_81911266
transcript_92952.known	chr17	-	1857	13	FSM	ENSG00000185813.11	ENST00000570391.5	1857	13	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_12	70.2275567154534	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTAGACCACACCACCTC	-81910194	False	NA	-116	True	NA	NA	NA	81911267	81904423	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81904945_81905065_81905155_81905381_81905448_81905669_81905736_81906099_81906178_81906463_81906547_81906759_81906899_81907553_81907599_81907772_81907858_81908567_81908635_81908875_81909038_81909513_81909603_81910900
transcript_92961.known	chr17	-	1006	12	FSM	ENSG00000185813.11	ENST00000576343.5	1006	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	85.952802732201	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCTGGAGGCTGCCAGG	-81907512	True	NA	NA	False	NA	NA	NA	81911418	81904897	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81904945_81905065_81905155_81905381_81905448_81905669_81905736_81906099_81906178_81906463_81906547_81906759_81906899_81907553_81907599_81907772_81907858_81908567_81908635_81909513_81909603_81911266
transcript_92973.known	chr17	-	1628	12	FSM	ENSG00000185813.11	ENST00000571105.5	1628	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	83.2327216328604	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGCCTGGCTCCAGGAAAAC	-81907507	True	NA	-59	True	NA	NA	NA	81911413	81904366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81904945_81905065_81905155_81905669_81905736_81906099_81906178_81906463_81906547_81906759_81906899_81907553_81907599_81907772_81907858_81908567_81908635_81908875_81909038_81909513_81909603_81911266
transcript_92982.known	chr17	-	1097	6	FSM	ENSG00000183684.8	ENST00000505490.3	1097	6	0	0	0	0	multi-exon	FALSE	canonical	3	1522	junction_5	135.99411751984	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTGATTCGTCCCACTG	-81856197	True	NA	-5	True	AATAAA	-25	NA	81891586	81887834	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81888146_81888240_81888419_81888519_81888584_81889181_81889330_81890688_81890821_81891322
transcript_92988.known	chr17	+	599	5	FSM	ENSG00000141552.18	ENST00000578550.5	599	5	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_1	1764.60151309014	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTGGAAACAAGGGCTGGA	81871631	True	NA	-65	True	NA	NA	NA	81891749	81900159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81891842_81893103_81893188_81893551_81893615_81894466_81894587_81899919
transcript_92992.known	chr17	+	578	4	FSM	ENSG00000141552.18	ENST00000572639.5	578	4	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	1730.40515486981	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGGCCTCTGGGTGCCT	NA	False	NA	31	True	ATTAAA	-15	NA	81891646	81900255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81891706_81893551_81893615_81894466_81894587_81899919
transcript_92994.known	chr17	+	722	4	FSM	ENSG00000141552.18	ENST00000574924.6	722	4	0	0	0	0	multi-exon	FALSE	canonical	3	873	junction_1	1375.02218163926	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTCGTCAAACCCTGAGT	81871613	True	NA	28	True	AATAAA	-21	NA	81891731	81900356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81891834_81893551_81893615_81894466_81894587_81899919
transcript_92995.known	chr17	+	638	4	FSM	ENSG00000141552.18	ENST00000344877.10	638	4	0	0	0	0	multi-exon	FALSE	canonical	3	788	junction_1	1408.73875821207	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGGCCTCTGGGTGCCT	81871604	True	NA	31	True	ATTAAA	-15	NA	81891722	81900255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81891842_81893551_81893615_81894466_81894587_81899919
transcript_92997.known	chr17	+	636	4	FSM	ENSG00000141552.18	ENST00000571874.6	636	4	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_1	1593.39769744475	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGCCTCTGGGTGCC	81871627	True	NA	30	True	ATTAAA	-14	NA	81891745	81900254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81891864_81893551_81893615_81894466_81894587_81899919
transcript_92999.known	chr17	+	687	4	FSM	ENSG00000141552.18	ENST00000392376.7	687	4	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	1688.07312901097	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGCCTCTGGGTGCC	81871819	False	NA	30	True	ATTAAA	-14	NA	81891937	81900254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81892107_81893551_81893615_81894466_81894587_81899919
transcript_930.known	chr1	-	700	4	FSM	ENSG00000242485.6	ENST00000344843.12	700	4	0	0	0	0	multi-exon	FALSE	canonical	3	1975	junction_1	57.2033410057684	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTAGAGTCATTTTCTG	-1392303	True	NA	-22	True	AATGAA	-17	NA	1407293	1401908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1402257_1405808_1405887_1406908_1407020_1407130
transcript_93002.known	chr17	+	575	3	FSM	ENSG00000141552.18	ENST00000579978.5	575	3	0	0	0	0	multi-exon	FALSE	canonical	3	676	junction_1	1780	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGAGGCCTCTGGGTG	81871601	True	NA	28	True	ATTAAA	-12	NA	81891719	81900252	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81891842_81894466_81894587_81899919
transcript_93003.known	chr17	+	563	3	FSM	ENSG00000141552.18	ENST00000579133.5	563	3	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_2	185.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGCCTCTGGGTGCC	81871653	True	NA	30	True	ATTAAA	-14	NA	81891771	81900254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81891842_81894466_81894625_81899919
transcript_93004.known	chr17	+	668	3	FSM	ENSG00000141552.18	ENST00000571024.6	668	3	0	0	0	0	multi-exon	FALSE	canonical	3	866	junction_1	1685	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTCGTCAAACCCTGAGT	81871604	True	NA	28	True	AATAAA	-21	NA	81891722	81900356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81891834_81894466_81894587_81899919
transcript_93005.known	chr17	+	603	3	FSM	ENSG00000141552.18	ENST00000577425.5	603	3	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_2	280.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGAGGCCTCTGGGTGC	81871604	True	NA	29	True	ATTAAA	-13	NA	81891722	81900253	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81891834_81894466_81894625_81899919
transcript_93006.known	chr17	+	686	3	FSM	ENSG00000141552.18	ENST00000572851.6	686	3	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_1	1988	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTCGTCAAACCCTGAGT	81871616	True	NA	28	True	AATAAA	-21	NA	81891734	81900356	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81891864_81894466_81894587_81899919
transcript_93007.known	chr17	+	499	3	FSM	ENSG00000141552.18	ENST00000583839.1	499	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	2080	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGCCTCTGGGTGCC	81891776	False	NA	30	True	ATTAAA	-14	NA	81892062	81900254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81892107_81894466_81894587_81899919
transcript_93009.known	chr17	+	575	2	FSM	ENSG00000183979.8	ENST00000333383.8	575	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGGGTGCTGGAGGACT	81902145	True	NA	8	True	AATAAA	-20	NA	81902237	81902905	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81902527_81902619
transcript_9301.known	chr1	-	1020	2	FSM	ENSG00000078618.23	ENST00000491410.1	1020	2	0	0	0	0	multi-exon	FALSE	canonical	3	832	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTATATCTCTCAGAGG	-51860345	True	NA	NA	False	TATAAA	-41	NA	51878771	51839991	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_51840515_51878274
transcript_93010.known	chr17	+	672	5	FSM	ENSG00000141552.18	ENST00000577747.5	672	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1769.53897597651	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGCCTCTGGGTGCC	81871641	True	NA	30	True	ATTAAA	-14	NA	81891759	81900254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81891830_81893103_81893188_81893551_81893615_81894466_81894587_81899919
transcript_93011.known	chr17	+	523	3	FSM	ENSG00000141552.18	ENST00000582222.5	523	3	0	0	0	0	multi-exon	FALSE	canonical	3	788	junction_1	803	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGGGTTCAAACGGTTCTC	81871604	True	NA	NA	False	NA	NA	NA	81891722	81894807	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81891842_81893551_81893615_81894466
transcript_93012.known	chr17	+	881	4	FSM	ENSG00000141552.18	ENST00000357385.7	881	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	111.03452916398	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGCCTCTGGGTGCC	81871620	True	NA	30	True	ATTAAA	-14	NA	81891738	81900254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81891864_81894466_81894587_81899241_81899543_81899919
transcript_93022.known	chr17	-	1725	10	FSM	ENSG00000187531.14	ENST00000328666.11	1725	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	35.0966918352397	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGGTGTCCCCGAGTGGT	-81918159	False	2286	-1	True	ATTAAA	-16	NA	81918176	81911938	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81912615_81913773_81913881_81914086_81914168_81914293_81914531_81914603_81914703_81915439_81915513_81915610_81915682_81917614_81917720_81917829_81917968_81918038
transcript_93030.nic	chr17	-	1812	9	ISM	ENSG00000187531.14	ENST00000328666.11	1725	10	-16	0	-16	0	intron_retention	FALSE	canonical	0	0	junction_8	36.7183111675905	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGGTGTCCCCGAGTGGT	-81918175	False	2286	-1	True	ATTAAA	-16	NA	81918192	81911938	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_81912615_81913773_81913881_81914086_81914168_81914293_81914531_81914603_81914703_81915439_81915513_81915610_81915682_81917614_81917720_81917829
transcript_93031.nic	chr17	-	1647	9	NIC	ENSG00000187531.14	novel	1725	10	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	37.1718979875927	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGGTGTCCCCGAGTGGT	-81918186	False	NA	-1	True	ATTAAA	-16	NA	81918203	81911938	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_81912615_81913773_81913881_81914086_81914168_81914293_81914531_81914603_81914703_81915439_81915513_81915610_81915682_81917829_81917968_81918038
transcript_93032.nic	chr17	-	2489	9	NIC	ENSG00000187531.14	novel	1725	10	NA	NA	-27	0	intron_retention	FALSE	canonical	0	0	junction_7	37.0487432310463	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGGTGTCCCCGAGTGGT	-81918186	False	NA	-1	True	ATTAAA	-16	NA	81918203	81911938	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_81912615_81913773_81913881_81914086_81914168_81914293_81914531_81914603_81915513_81915610_81915682_81917614_81917720_81917829_81917968_81918038
transcript_93033.nnic	chr17	-	1653	9	NIC	ENSG00000187531.14	novel	1725	10	NA	NA	-27	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	45.7055795281058	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGGTGTCCCCGAGTGGT	-81918186	False	NA	-1	True	ATTAAA	-16	NA	81918203	81911938	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_81912615_81913773_81913881_81914086_81914168_81914293_81914531_81915439_81915513_81915610_81915682_81917614_81917720_81917829_81917968_81918038
transcript_93047.known	chr17	-	2511	8	FSM	ENSG00000187531.14	ENST00000571832.5	2511	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	39.4052726193346	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGGTGTCCCCGAGTGGT	-81918135	False	2286	-1	True	ATTAAA	-16	NA	81918152	81911938	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81912615_81913773_81913881_81914086_81914168_81914293_81915513_81915610_81915682_81917614_81917720_81917829_81917968_81918038
transcript_93057.nic	chr17	-	2688	7	NIC	ENSG00000187531.14	novel	2511	8	NA	NA	-27	0	intron_retention	FALSE	canonical	0	0	junction_5	41.1933112154011	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGGTGTCCCCGAGTGGT	-81918186	False	NA	-1	True	ATTAAA	-16	NA	81918203	81911938	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_81912615_81913773_81913881_81914086_81915513_81915610_81915682_81917614_81917720_81917829_81917968_81918038
transcript_93070.known	chr17	-	1743	3	FSM	ENSG00000197063.11	ENST00000392366.7	1743	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	80	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGCCGTGAGCCGACCA	-81923520	False	NA	NA	False	TATAAA	-33	NA	81923532	81921559	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81923058_81923149_81923215_81923352
transcript_93071.known	chr17	-	5061	3	FSM	ENSG00000197063.11	ENST00000357736.9	5061	3	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	2	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCAGGTGCTTCTTTGGG	-81915813	False	11922	-2	True	AATAAA	-14	NA	81927735	81918269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81923058_81923149_81923215_81927527
transcript_93077.nnic	chr17	+	2007	2	NNC	ENSG00000265688.2	novel	1895	2	NA	NA	-13	-236	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGCATGGTGGTGCACA	NA	False	NA	NA	False	AAGAAA	-15	NA	81927815	81930517	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_81928446_81929140
transcript_93079.nnic	chr17	+	2240	2	NNC	ENSG00000265688.2	novel	1895	2	NA	NA	-13	-3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTCACTCCAAACCGCTT	NA	False	NA	2	True	NA	NA	NA	81927815	81930750	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_81928446_81929140
transcript_93080.known	chr17	+	1895	2	FSM	ENSG00000265688.2	ENST00000582106.1	1895	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTCCAAACCGCTTCAT	81927587	True	NA	5	True	NA	NA	NA	81927828	81930753	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81928446_81929475
transcript_93092.nic	chr17	-	2130	8	NIC	ENSG00000183010.17	novel	1346	8	NA	NA	-12	0	intron_retention	FALSE	canonical	3	36	junction_7	523.671925650293	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAAAGTCTACAGATTCA	-81925347	True	NA	-19	True	ATTAAA	-18	NA	81937269	81932390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_81933377_81934325_81934490_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81936969
transcript_93093.known	chr17	-	1346	8	FSM	ENSG00000183010.17	ENST00000402252.6	1346	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_7	528.060177461251	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGGTCTTCACCCACTCC	-81925317	True	NA	NA	False	NA	NA	NA	81937239	81932934	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81933377_81934325_81934490_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81937179
transcript_93094.nnic	chr17	-	1881	8	NNC	ENSG00000183010.17	novel	1346	8	NA	NA	4	0	intron_retention	FALSE	canonical	3	182	junction_7	474.596498864766	625	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAAAGTCTACAGATTCA	-81925370	True	NA	-19	True	ATTAAA	-18	NA	81937292	81932390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_-_81933377_81934325_81934490_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81937241
transcript_93095.known	chr17	-	1904	8	FSM	ENSG00000183010.17	ENST00000619204.4	1904	8	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_7	351.510501483329	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTACAGATTCAAATGTTA	-81925406	True	NA	-12	True	ATTAAA	-25	NA	81937328	81932383	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81933377_81934325_81934490_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81937261
transcript_931.known	chr1	-	1693	3	FSM	ENSG00000242485.6	ENST00000487659.1	1693	3	0	0	0	0	multi-exon	FALSE	canonical	3	1975	junction_1	32.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTTTTTAGAGTCATTT	-1392278	True	NA	-26	True	AATGAA	-13	NA	1407268	1401912	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1402257_1405808_1407020_1407130
transcript_93105.known	chr17	-	1740	7	FSM	ENSG00000183010.17	ENST00000629768.2	1740	7	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	557.088388159565	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTACAGATTCAAATGTTA	-81925406	True	NA	-12	True	ATTAAA	-25	NA	81937328	81932383	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81933377_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81937261
transcript_93113.known	chr17	-	1811	7	FSM	ENSG00000183010.17	ENST00000403172.8	1811	7	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	606.730765844474	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTACAGATTCAAATGTTA	-81925406	True	NA	-12	True	ATTAAA	-25	NA	81937328	81932383	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81933377_81934325_81934490_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81937261
transcript_93119.known	chr17	-	767	7	FSM	ENSG00000183010.17	ENST00000585215.5	767	7	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_6	547.791525633206	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCAAGGACAACGTCAGCT	-81925378	True	NA	NA	False	GGGGCT	-39	NA	81937300	81934445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81934490_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81937257
transcript_9312.known	chr1	-	12780	5	FSM	ENSG00000169213.7	ENST00000371655.4	12780	5	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	31.3079462756662	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATTTGTAGAGTGACTC	-51984993	True	NA	-4	True	ATTAAA	-17	NA	51990700	51907955	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_51920115_51933317_51933443_51937293_51937413_51976889_51977118_51990551
transcript_93135.known	chr17	-	1890	8	FSM	ENSG00000183010.17	ENST00000337943.9	1890	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	524.684356036453	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTACAGATTCAAATGTTA	-81925335	True	NA	-12	True	ATTAAA	-25	NA	81937257	81932383	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81932964_81933306_81933377_81934325_81934490_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747
transcript_93136.known	chr17	-	2269	7	FSM	ENSG00000183010.17	ENST00000329875.13	2269	7	0	0	0	0	multi-exon	FALSE	canonical	3	1282	junction_1	149.68234884433	1045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAAAGTCTACAGATTCA	-81925378	True	NA	-19	True	ATTAAA	-18	NA	81937300	81932390	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_81933377_81934325_81934490_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747
transcript_93143.nic	chr17	+	1933	16	NIC	ENSG00000169696.16	novel	1764	16	NA	NA	-15	0	combination_of_known_junctions	TRUE	canonical	2	13	junction_11	114.499878699596	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTTCCTGTCATGCTTCC	NA	False	NA	11	True	AATAAA	-19	NA	81977534	82017406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_81977749_81979183_81979240_81983553_81983669_81985506_81985608_81994820_81994879_81995991_81996066_81996419_81996847_82009036_82009192_82009485_82009568_82010801_82010869_82011542_82011606_82012155_82012284_82016475_82016528_82016799_82016870_82016940_82017114_82017308
transcript_93145.known	chr17	+	1764	16	FSM	ENSG00000169696.16	ENST00000306739.9	1764	16	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_7	46.4727399187476	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTTCCTGTCATGCTTCC	81974773	True	NA	11	True	AATAAA	-19	NA	81977628	82017406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81977749_81979183_81979240_81983553_81983669_81985506_81985608_81994820_81994879_81995991_81996066_81996419_81996847_82009036_82009192_82009485_82009568_82010801_82010869_82011542_82011606_82012230_82012284_82016475_82016528_82016799_82016870_82016940_82017114_82017308
transcript_93151.nnic	chr17	+	1760	16	NNC	ENSG00000169696.16	novel	5503	9	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	111.888515943326	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTTCCTGTCATGCTTCC	81975007	False	NA	11	True	AATAAA	-19	NA	81977862	82017406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_81977979_81979183_81979240_81983553_81983669_81985506_81985608_81994820_81994879_81995991_81996066_81996419_81996847_82009036_82009192_82009485_82009568_82010801_82010869_82011542_82011606_82012230_82012284_82016475_82016528_82016799_82016870_82016940_82017114_82017308
transcript_93153.nic	chr17	+	2109	16	NIC	ENSG00000169696.16	novel	1919	17	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	112.350562476958	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTTCCTGTCATGCTTCC	81975019	False	NA	11	True	AATAAA	-19	NA	81977874	82017406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_81978340_81979183_81979240_81983553_81983669_81985506_81985608_81994820_81994879_81995991_81996066_81996419_81996847_82009036_82009192_82009485_82009568_82010801_82010869_82011542_82011606_82012230_82012284_82016475_82016528_82016799_82016870_82016940_82017114_82017308
transcript_93155.nnic	chr17	+	2347	16	NNC	ENSG00000169696.16	novel	1919	17	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	113.044219469885	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTTCCTGTCATGCTTCC	81976591	True	NA	11	True	AATAAA	-19	NA	81977885	82017406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_81978589_81979183_81979240_81983553_81983669_81985506_81985608_81994820_81994879_81995991_81996066_81996419_81996847_82009036_82009192_82009485_82009568_82010801_82010869_82011542_82011606_82012230_82012284_82016475_82016528_82016799_82016870_82016940_82017114_82017308
transcript_93162.nic	chr17	+	1929	15	NIC	ENSG00000169696.16	novel	1764	16	NA	NA	-15	0	intron_retention	FALSE	canonical	3	347	junction_7	47.9277198135965	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTTCCTGTCATGCTTCC	NA	False	NA	11	True	AATAAA	-19	NA	81977534	82017406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_81977749_81979183_81979240_81983553_81983669_81985506_81985608_81994820_81994879_81995991_81996066_81996419_81996847_82009036_82009192_82009485_82009568_82010801_82010869_82011542_82011606_82012230_82012284_82016475_82016528_82016799_82017114_82017308
transcript_93188.known	chr17	+	720	5	FSM	ENSG00000169696.16	ENST00000581647.5	720	5	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_1	45.1137451338281	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTTTTGATCATTTTCAA	81974775	True	NA	5	True	AATAAA	-15	NA	81977630	81995150	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_81977749_81979183_81979240_81983553_81983669_81985506_81985608_81994820
transcript_93196.known	chr17	+	2698	17	FSM	ENSG00000169683.8	ENST00000306688.8	2698	17	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_6	13.8099545165797	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTGGCCCCGCCTCTCC	82022099	True	NA	17	True	AATACA	-22	NA	82023304	82031151	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82023864_82024277_82024340_82024692_82024764_82024999_82025179_82025378_82025508_82026898_82027012_82027385_82027445_82027673_82027752_82028010_82028147_82028233_82028312_82028396_82028509_82028612_82028684_82029092_82029186_82029542_82029636_82030064_82030239_82030318_82030467_82030608
transcript_932.known	chr1	-	1049	3	FSM	ENSG00000242485.6	ENST00000482352.1	1049	3	0	0	0	0	multi-exon	FALSE	canonical	3	2040	junction_2	37.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGGCAGGAGAATTGCTT	-1392300	True	NA	NA	False	NA	NA	NA	1407290	1405108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1405887_1406908_1407020_1407130
transcript_9320.known	chr1	-	800	8	FSM	ENSG00000117862.13	ENST00000472624.5	800	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	591.222911102272	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCAGAGTTAGTGTTCTG	-52041148	True	NA	NA	False	AAGAAA	-41	NA	52055176	52020913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_52021013_52023490_52023575_52024509_52024580_52027274_52027349_52028577_52028631_52030366_52030549_52041536_52041598_52054999
transcript_93201.known	chr17	-	894	5	FSM	ENSG00000169689.15	ENST00000583767.1	894	5	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_4	707.023470261066	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCAGCTGGCAGCGCTGC	-82000794	True	NA	NA	False	NA	NA	NA	82022852	82018865	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82019220_82019292_82019382_82019509_82019695_82019857_82019910_82022638
transcript_93202.known	chr17	-	799	5	FSM	ENSG00000169689.15	ENST00000584347.1	799	5	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	681.188116455359	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTCCAGCCATGCGATAT	-82000821	True	NA	-130	True	NA	NA	NA	82022879	82018800	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82019220_82019292_82019382_82019509_82019695_82019857_82019910_82022825
transcript_93204.known	chr17	-	882	5	FSM	ENSG00000169689.15	ENST00000584514.5	882	5	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_4	603.596512581045	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCTCTCCCAGCTTGGC	-82000763	False	NA	-45	True	AATAAA	-6	NA	82022821	82018715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82019220_82019292_82019382_82019640_82019695_82019857_82019910_82022638
transcript_93205.known	chr17	-	730	5	FSM	ENSG00000169689.15	ENST00000584600.5	730	5	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_1	530.744936386585	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGCTTTCTTGCCATTA	-82000800	True	NA	-32	True	AATAAA	-19	NA	82022858	82018702	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82019220_82019307_82019382_82019640_82019695_82019857_82019910_82022825
transcript_93207.known	chr17	-	752	4	FSM	ENSG00000169689.15	ENST00000580090.5	752	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	706.230525788538	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCCACATTCCTGCCAC	-82000815	True	NA	NA	False	NA	NA	NA	82022873	82018843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82019220_82019292_82019382_82019857_82019910_82022638
transcript_93208.known	chr17	-	710	4	FSM	ENSG00000169689.15	ENST00000580435.5	710	4	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_1	617.10993077949	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGCTTTCTTGCCATTA	-82000834	True	NA	-32	True	AATAAA	-19	NA	82022892	82018702	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82019220_82019307_82019382_82019857_82019910_82022825
transcript_93210.known	chr17	-	861	4	FSM	ENSG00000169689.15	ENST00000577379.5	861	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	420.721074136086	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTCCTGCCACCCGACA	-82000791	True	NA	NA	False	NA	NA	NA	82022849	82018837	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82019382_82019640_82019695_82019857_82019910_82022638
transcript_93211.nic	chr17	-	894	4	NIC	ENSG00000169689.15	novel	765	5	NA	NA	-16	0	intron_retention	FALSE	canonical	3	907	junction_1	374.433201281914	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGCTTTCTTGCCATTA	NA	False	NA	-32	True	AATAAA	-19	NA	82022934	82018702	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_82019382_82019640_82019695_82019857_82019910_82022825
transcript_93213.known	chr17	-	739	3	FSM	ENSG00000169689.15	ENST00000585091.1	739	3	0	0	0	0	multi-exon	FALSE	canonical	3	1756	junction_2	14.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCAGGCCTTGTGTTTC	-82000826	True	NA	NA	False	NA	NA	NA	82022884	82019156	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82019220_82019292_82019910_82022825
transcript_93216.nic	chr17	-	840	3	NIC	ENSG00000169689.15	novel	751	4	NA	NA	-16	0	intron_retention	FALSE	canonical	3	1202	junction_1	277	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGCTTTCTTGCCATTA	NA	False	NA	-32	True	AATAAA	-19	NA	82022934	82018702	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_82019382_82019857_82019910_82022825
transcript_93219.known	chr17	+	1038	6	FSM	ENSG00000169750.9	ENST00000306897.9	1038	6	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	27.6072454257936	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGCCTCTCACTACCT	82024436	True	NA	23	True	AATAAA	-16	NA	82031677	82034204	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82031797_82032386_82032459_82032710_82032829_82032946_82033010_82033439_82033600_82033698
transcript_9322.known	chr1	-	1416	7	FSM	ENSG00000117862.13	ENST00000371626.9	1416	7	0	0	0	0	multi-exon	TRUE	canonical	3	1154	junction_1	115.853355583686	891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTGTGATGGCCTTTTT	-52041163	True	NA	-5	True	AATAAA	-15	NA	52055191	52020130	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_52021013_52023490_52023575_52024509_52024580_52027274_52027349_52028577_52028631_52041536_52041598_52054999
transcript_93224.known	chr17	+	730	5	FSM	ENSG00000169750.9	ENST00000584341.1	730	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	63.0966520506437	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTGCTCTGCCCGCCCCC	82021025	False	NA	NA	False	NA	NA	NA	82032183	82033772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82032499_82032710_82032829_82032946_82033010_82033439_82033600_82033698
transcript_93228.known	chr17	-	676	8	FSM	ENSG00000169738.8	ENST00000582900.5	676	8	0	0	0	0	multi-exon	TRUE	canonical	3	50	junction_7	336.811822954053	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGCATGACCACGGGTT	-82029184	True	NA	NA	False	NA	NA	NA	82037687	82036017	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82036064_82036190_82036309_82036383_82036449_82036543_82036644_82036720_82036764_82036858_82037014_82037449_82037542_82037630
transcript_93241.known	chr17	-	915	7	FSM	ENSG00000169738.8	ENST00000580320.5	915	7	0	0	0	0	multi-exon	FALSE	canonical	3	836	junction_6	77.0814864643616	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTGCTATTCCTAGGCT	-82029195	True	NA	-3	True	AATAAA	-20	NA	82037698	82035878	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82036064_82036190_82036309_82036383_82036449_82036543_82036644_82036720_82036764_82036858_82037014_82037449
transcript_93249.known	chr17	+	1949	14	FSM	ENSG00000169727.13	ENST00000320548.8	1949	14	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	460.621396600198	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGGCTGTTCTTTCCT	82051062	False	NA	31	True	ATTAAA	-17	NA	82051874	82057470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82051965_82052374_82052460_82053273_82053367_82053867_82054050_82054509_82054811_82054897_82054976_82055161_82055223_82055739_82055826_82056000_82056096_82056285_82056392_82056469_82056551_82056628_82056767_82056839_82056975_82057052
transcript_93250.nic	chr17	+	2053	14	NIC	ENSG00000169727.13	novel	1949	14	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_1	463.236108596569	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGGCTGTTCTTTCCT	82038789	True	NA	31	True	ATTAAA	-17	NA	82051889	82057470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_82051965_82052255_82052460_82053273_82053367_82053867_82054050_82054509_82054811_82054897_82054976_82055161_82055223_82055739_82055826_82056000_82056096_82056285_82056392_82056469_82056551_82056628_82056767_82056839_82056975_82057052
transcript_93254.nic	chr17	+	1872	13	NIC	ENSG00000169727.13	novel	875	8	NA	NA	-50	0	combination_of_known_junctions	TRUE	canonical	3	35	junction_1	383.912632928668	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGGCTGTTCTTTCCT	NA	False	NA	31	True	ATTAAA	-17	NA	82051426	82057470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_+_82051525_82053273_82053367_82053867_82054050_82054509_82054811_82054897_82054976_82055161_82055223_82055739_82055826_82056000_82056096_82056285_82056392_82056469_82056551_82056628_82056767_82056839_82056975_82057052
transcript_9326.known	chr1	-	1020	3	FSM	ENSG00000117862.13	ENST00000610127.2	1020	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	672	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTAGTAAATGGAAGTGC	-52041163	True	NA	NA	False	NA	NA	NA	52055191	52033284	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_52034052_52041536_52041598_52054999
transcript_93262.known	chr17	+	1855	13	FSM	ENSG00000169727.13	ENST00000584460.5	1855	13	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	485.029058407844	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCGTTGCTCTTGGCTGTT	82038828	True	NA	24	True	ATTAAA	-10	NA	82051928	82057463	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82051965_82053233_82053367_82053867_82054050_82054497_82054811_82054897_82054976_82055161_82055223_82055739_82055826_82056000_82056096_82056285_82056392_82056469_82056551_82056628_82056767_82056839_82056975_82057052
transcript_93270.known	chr17	-	994	7	FSM	ENSG00000169733.12	ENST00000429557.7	994	7	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_6	35.3207524771989	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGTGATGGGTGTTTTGGG	-82048921	False	NA	NA	False	NA	NA	NA	82051434	82048552	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82048808_82049030_82049117_82049676_82049843_82049917_82050007_82050401_82050556_82050661_82050765_82051293
transcript_93275.known	chr17	-	2082	6	FSM	ENSG00000169733.12	ENST00000580953.5	2082	6	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_4	37.989472225868	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACGTGGCTCCTGTCTTA	-82049049	False	79	-5	True	AGTAAA	-15	NA	82051562	82047905	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82048808_82049030_82049117_82049676_82050556_82050661_82050765_82051293_82051343_82051499
transcript_93276.known	chr17	+	1842	13	FSM	ENSG00000169727.13	ENST00000306823.10	1842	13	0	0	0	0	multi-exon	TRUE	canonical	3	214	junction_3	352.891026223236	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGGCTGTTCTTTCCT	82038808	True	NA	31	True	ATTAAA	-17	NA	82051908	82057470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82051965_82053273_82053367_82053867_82054050_82054497_82054811_82054897_82054976_82055161_82055223_82055739_82055826_82056000_82056096_82056285_82056392_82056469_82056551_82056628_82056767_82056839_82056975_82057052
transcript_93277.known	chr17	-	2233	14	FSM	ENSG00000169718.18	ENST00000306796.10	2233	14	0	0	0	0	multi-exon	FALSE	canonical	3	640	junction_2	94.2577355449364	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGCCTGCACGGCAGGAA	-82060659	True	NA	NA	False	NA	NA	NA	82065804	82057505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82058255_82058340_82058417_82058780_82058819_82059947_82060094_82060700_82060784_82060864_82060962_82061208_82061354_82061617_82061722_82061900_82061984_82062860_82062974_82063467_82063519_82064125_82064235_82064822_82065070_82065612
transcript_93279.nnic	chr17	-	2225	13	NIC	ENSG00000169718.18	novel	2233	14	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	240.537751137368	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGAGAGCCCACAGCCTGT	-82060659	True	NA	-13	True	AATAAA	-13	NA	82065804	82057881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_82058255_82058340_82058819_82059947_82060094_82060700_82060784_82060860_82060962_82061208_82061354_82061617_82061722_82061900_82061984_82062860_82062974_82063467_82063519_82064125_82064235_82064822_82065070_82065612
transcript_93285.known	chr17	-	2151	13	FSM	ENSG00000169718.18	ENST00000354321.11	2151	13	0	0	0	0	multi-exon	FALSE	canonical	3	640	junction_2	94.6676936564012	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCCTGTGACCACTGCC	-82065531	False	NA	-3	True	AATAAA	-23	NA	82065545	82057871	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82058255_82058340_82058417_82058780_82058819_82059947_82060094_82060700_82060784_82060864_82060962_82061208_82061354_82061617_82061722_82061900_82061984_82062860_82062974_82063467_82063519_82064125_82064235_82064822
transcript_93286.known	chr17	-	1040	4	FSM	ENSG00000169718.18	ENST00000542088.2	1040	4	0	0	0	0	multi-exon	FALSE	canonical	3	831	junction_3	101.905184689822	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTGCAAAAGTGAACAATAAA	-82060761	False	NA	-45	True	NA	NA	NA	82060775	82057913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82058255_82058340_82058819_82059947_82060094_82060700
transcript_93288.known	chr17	-	8464	43	FSM	ENSG00000169710.9	ENST00000306749.4	8464	43	0	0	0	0	multi-exon	FALSE	canonical	3	547	junction_39	340.090554167583	270	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCGTCCTTTCTTCCCTC	-82047222	True	NA	-13	True	ATTAAA	-17	NA	82098236	82078337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82079281_82079356_82079609_82080139_82080239_82080369_82080591_82080691_82080923_82081163_82081353_82081600_82081844_82082008_82082161_82082322_82082415_82082526_82082679_82082913_82083116_82083201_82083426_82083516_82083640_82083771_82083892_82083974_82084154_82084233_82084385_82084512_82084717_82084798_82084954_82085034_82085157_82085237_82085403_82085481_82085872_82086253_82086559_82087049_82087254_82087324_82087505_82087684_82087862_82087953_82088035_82088115_82088308_82088389_82088563_82088760_82088877_82088968_82089173_82089249_82089385_82089631_82089727_82090374_82090565_82090881_82091070_82091221_82091685_82092454_82092590_82092696_82092813_82092896_82093020_82093218_82093420_82093597_82093772_82095319_82095473_82096318_82096453_82098120
transcript_9329.known	chr1	-	1708	1	FSM	ENSG00000198841.4	ENST00000371614.2	1708	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAATCTCTTTCACTTAA	-52032545	True	NA	-4	True	AATAAA	-19	NA	52033810	52032102	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_52032100_52033800
transcript_933.known	chr1	+	543	2	FSM	ENSG00000225905.1	ENST00000428932.1	543	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACCCACACACAGTGGGG	1420177	False	NA	NA	False	NA	NA	NA	1420244	1422691	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1420565_1422468
transcript_9330.known	chr1	+	892	7	FSM	ENSG00000134717.18	ENST00000477828.6	892	7	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_2	586.039935120087	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTAACTAAAAGTTTGGT	52037557	True	NA	NA	False	NA	NA	NA	52056198	52086747	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_52056380_52059834_52059902_52060427_52060660_52064824_52064939_52083339_52083542_52086111_52086172_52086711
transcript_93307.nic	chr17	-	1657	4	ISM	ENSG00000176155.20	ENST00000389641.9	2997	17	-49	92840	-32	-5960	5prime_fragment	FALSE	canonical	2	7	junction_3	4.92160768674447	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATTGAGTCTCGTTTGAG	-82211684	True	NA	NA	False	AAAAAG	-13	NA	82212862	82194309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_-_82195365_82198313_82198423_82201537_82201953_82212784
transcript_93308.known	chr17	-	513	2	FSM	ENSG00000176155.20	ENST00000584717.1	513	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTAGCGTTGTTTATCTG	-82106225	True	NA	-6	True	ATTAAA	-30	NA	82106375	82101459	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82101867_82106269
transcript_93335.known	chr17	-	3712	9	FSM	ENSG00000141551.15	ENST00000314028.11	3681	9	-31	0	-31	0	multi-exon	FALSE	canonical	3	177	junction_1	70.8818338857002	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCTCCCCTTTCCATGT	NA	False	NA	-13	True	AATAAA	-22	NA	82273731	82242666	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82244832_82248874_82249015_82249430_82249603_82251378_82251528_82252433_82252605_82253015_82253245_82255428_82255578_82265685_82265797_82273305
transcript_93338.known	chr17	-	2047	10	FSM	ENSG00000141551.15	ENST00000392334.6	2047	10	0	0	0	0	multi-exon	TRUE	canonical	3	171	junction_2	85.7335810145607	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTTTTATTGTTTCT	-82271026	True	NA	18	True	AAGAAA	-2	NA	82273697	82244361	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82244832_82245975_82246040_82248874_82249015_82249430_82249603_82251378_82251528_82252433_82252605_82253015_82253245_82255428_82255578_82265685_82265797_82273305
transcript_9335.known	chr1	+	4533	6	FSM	ENSG00000134717.18	ENST00000313334.13	4533	6	0	0	0	0	multi-exon	FALSE	canonical	3	1199	junction_1	85.5724254652163	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCAGTCTGATGCGGCAG	52037653	True	NA	3	True	AATACA	-17	NA	52056294	52090716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_52056380_52059834_52059902_52064824_52064939_52083339_52083542_52086111_52086172_52086711
transcript_93354.known	chr17	-	1580	9	FSM	ENSG00000141551.15	ENST00000398519.9	1580	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	121.170076751647	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTCCCATCTAACCACCA	-82270757	False	NA	-2	True	AATAAA	-17	NA	82273428	82239726	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82240063_82248874_82249015_82249430_82249603_82251378_82251528_82252433_82252605_82253015_82253245_82255428_82255578_82265685_82265797_82273305
transcript_93390.known	chr17	+	2659	5	FSM	ENSG00000141526.18	ENST00000392341.6	2659	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	19.9123077517399	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACATCTCAGGTCCAGCT	82228262	True	NA	NA	False	AATGAA	-15	NA	82228420	82240086	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82228546_82235982_82236232_82236728_82236873_82237137_82237894_82238701
transcript_93394.known	chr17	+	2599	5	FSM	ENSG00000141526.18	ENST00000582743.6	2599	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	7.22841614740048	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACATCTCAGGTCCAGCT	82227548	True	NA	NA	False	AATGAA	-15	NA	82229041	82240086	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82229107_82235982_82236232_82236728_82236873_82237137_82237894_82238701
transcript_934.known	chr1	-	2024	4	FSM	ENSG00000235098.9	ENST00000537107.6	2024	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	6.59966329107444	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTGTCTGAGAGGTTTT	-1421220	False	NA	2	True	AATAAA	-17	NA	1421276	1418419	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1419550_1420051_1420593_1420796_1421006_1421132
transcript_93400.nic	chr17	+	2870	4	ISM	ENSG00000141526.18	ENST00000582743.6	2599	5	-66	603	-66	2	intron_retention	FALSE	canonical	3	34	junction_1	8.33999733546454	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTTCCTAGGAGTATGTG	82227482	True	NA	15	True	AATAAA	-30	NA	82228975	82239483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr17_+_82229107_82235982_82236232_82236728_82236873_82237137
transcript_93401.known	chr17	+	2439	4	FSM	ENSG00000141526.18	ENST00000578684.6	2439	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	18.2086670449969	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACATCTCAGGTCCAGCT	82227564	True	NA	NA	False	AATGAA	-15	NA	82229057	82240086	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82229107_82235982_82236232_82237137_82237894_82238701
transcript_93406.known	chr17	-	598	2	FSM	ENSG00000141551.15	ENST00000579308.1	598	2	0	0	0	0	multi-exon	FALSE	canonical	3	381	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGAGGCAGGAGAATCGC	-82270735	False	NA	NA	False	NA	NA	NA	82273406	82265299	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82265797_82273305
transcript_93410.known	chr17	+	1935	2	FSM	ENSG00000182459.5	ENST00000333437.5	1935	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTGTGTAAGTCATTCC	82359115	True	NA	NA	False	CATAAA	-14	NA	82359246	82363775	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82359286_82361879
transcript_9342.known	chr1	+	794	5	FSM	ENSG00000134717.18	ENST00000489308.6	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_3	441.67550305626	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTACTTTTCTTTTCCC	52037629	True	NA	9	True	AATAAA	-14	NA	52056270	52087155	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_52056380_52059834_52059902_52064824_52064939_52086111_52086172_52086711
transcript_93427.known	chr17	+	2167	13	FSM	ENSG00000169660.17	ENST00000327949.15	2167	13	0	0	0	0	multi-exon	FALSE	canonical	2	53	junction_10	12.4085543969562	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTGAAGGGTTATTTATG	82416897	True	NA	20	True	AATAAA	-20	NA	82418346	82442645	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82418741_82419748_82419884_82424393_82424504_82428557_82428646_82433657_82433823_82435688_82435873_82436666_82436739_82437167_82437364_82439630_82439714_82440996_82441076_82441164_82441267_82441799_82441890_82442176
transcript_93439.known	chr17	+	2285	12	FSM	ENSG00000169660.17	ENST00000337014.10	2285	12	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_9	9.2477381643851	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTGAAGGGTTATTTATG	NA	False	NA	20	True	AATAAA	-20	NA	82418317	82442645	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82418741_82419748_82419884_82424393_82424504_82428557_82428646_82433657_82433823_82435688_82435873_82436666_82436739_82437167_82437364_82439630_82439714_82440996_82441267_82441799_82441890_82442176
transcript_93460.known	chr17	-	1274	10	FSM	ENSG00000181396.13	ENST00000580445.5	1274	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_8	32.6666666666667	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAACCCCGACCATGGCA	-82417298	True	NA	NA	False	NA	NA	NA	82418637	82392440	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82392535_82394330_82394544_82398195_82398320_82403936_82404091_82405323_82405381_82406417_82406483_82409367_82409411_82411454_82411531_82415405_82415628_82418411
transcript_93469.known	chr17	-	4249	9	FSM	ENSG00000181396.13	ENST00000313056.10	4249	9	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	13.2382022948737	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGCTGTCGGGAAGGGA	-82417247	True	NA	-14	True	AATAAA	-17	NA	82418586	82389209	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82392535_82398195_82398320_82403936_82404091_82405323_82405381_82406417_82406483_82409367_82409411_82411454_82411531_82415397_82415628_82418411
transcript_9347.known	chr1	+	2159	5	FSM	ENSG00000134717.18	ENST00000472944.6	2159	5	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	480.551245966546	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGTGTACAGAATTTCC	52037662	True	NA	42	True	NA	NA	NA	52056303	52088418	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_52056380_52064824_52064939_52083339_52083542_52086111_52086172_52086711
transcript_93476.known	chr17	-	617	8	FSM	ENSG00000178927.18	ENST00000577888.5	617	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	102.178315523722	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCCGGTGACCCTGCAA	-82447544	True	NA	NA	False	NA	NA	NA	82450775	82444034	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82444125_82444446_82444592_82445863_82445881_82446622_82446697_82447579_82447622_82449169_82449293_82449430_82449481_82450699
transcript_93477.known	chr17	-	2242	8	FSM	ENSG00000178927.18	ENST00000437807.6	2242	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	92.4770241735751	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCAGCTTCCACTCTTT	-82447478	True	NA	-7	True	CATAAA	-17	NA	82450709	82442643	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82444125_82444446_82444592_82445863_82445961_82446622_82446697_82447579_82447622_82449169_82449293_82449430_82449481_82450479
transcript_93479.known	chr17	-	841	8	FSM	ENSG00000178927.18	ENST00000578919.5	841	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	89.6369093075173	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCCGTGCACCGCCCACA	-82447545	True	NA	NA	False	NA	NA	NA	82450776	82443891	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82444125_82444446_82444592_82445863_82445961_82446622_82446697_82447579_82447622_82449169_82449293_82449430_82449481_82450699
transcript_93485.known	chr17	-	741	8	FSM	ENSG00000178927.18	ENST00000585080.5	741	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	99.6594200264079	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGCCTGAGCCCGTGCA	-82447544	True	NA	NA	False	NA	NA	NA	82450775	82443996	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82444125_82444446_82444592_82445863_82445961_82446622_82446697_82447579_82447622_82449169_82449293_82450198_82450255_82450699
transcript_93495.known	chr17	-	1053	7	FSM	ENSG00000178927.18	ENST00000577732.5	1053	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_6	72.4246735120935	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGAGCCCGTGCACCGC	-82449532	False	NA	NA	False	NA	NA	NA	82449726	82443848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82444125_82444446_82444592_82445863_82445961_82446622_82446697_82447579_82447622_82449169_82449293_82449430
transcript_93496.known	chr17	-	1074	7	FSM	ENSG00000178927.18	ENST00000585064.5	1074	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	83.5277731589253	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCGTGGCACATTCCCGG	-82447539	True	NA	NA	False	NA	NA	NA	82450770	82443822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82444125_82444446_82444592_82445863_82445961_82446622_82446697_82447579_82447622_82449169_82449293_82450479
transcript_93497.known	chr17	-	2073	7	FSM	ENSG00000178927.18	ENST00000306645.10	2073	7	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_6	40.303018910912	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGGTCTCCCTGTGCTGCT	-82447521	True	NA	0	True	NA	NA	NA	82450752	82442585	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82444125_82444446_82444592_82445863_82445961_82446622_82446697_82447579_82447622_82449169_82449293_82450699
transcript_9350.known	chr1	+	5148	19	FSM	ENSG00000157077.16	ENST00000287727.8	5148	19	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_15	2.6833965946074	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGCACTCTTTGTACA	52139459	True	NA	2	True	AATAAA	-14	NA	52142088	52346634	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_52142404_52216368_52216475_52233170_52233277_52237487_52239596_52263772_52263873_52266654_52266832_52268462_52268633_52274463_52274585_52278491_52278615_52281660_52281817_52293452_52293678_52295894_52295978_52303820_52303926_52332767_52332919_52334687_52334769_52337771_52337935_52340125_52340232_52344767_52344945_52346059
transcript_93507.known	chr17	-	584	6	FSM	ENSG00000178927.18	ENST00000584503.5	584	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	92.2106284546418	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTGCACCGCCCACAGGA	-82447506	True	NA	NA	False	NA	NA	NA	82450737	82443936	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82444125_82444446_82444592_82445863_82445961_82446622_82446697_82447579_82447622_82450699
transcript_93508.known	chr17	-	1079	6	FSM	ENSG00000178927.18	ENST00000577436.5	1079	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	103.833327982878	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATCGTGAGGCCTGGGCC	-82449411	False	NA	NA	False	NA	NA	NA	82449605	82443659	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82444125_82444446_82444592_82445863_82445961_82446622_82446697_82449169_82449293_82449430
transcript_93510.known	chr17	-	2050	6	FSM	ENSG00000178927.18	ENST00000434650.6	2050	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	87.5456452372133	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCAGCTTCCACTCTTT	-82450635	False	NA	-7	True	CATAAA	-17	NA	82450829	82442643	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82444125_82444446_82444592_82445863_82445961_82446622_82446697_82449169_82449293_82450699
transcript_93512.known	chr17	-	1965	6	FSM	ENSG00000178927.18	ENST00000584024.5	1965	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	89.2143486217324	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCAGCTTCCACTCTTT	-82447545	True	NA	-7	True	CATAAA	-17	NA	82450776	82442643	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82444125_82444446_82444592_82445863_82445961_82447579_82447622_82449169_82449293_82450699
transcript_93519.known	chr17	-	497	6	FSM	ENSG00000178927.18	ENST00000584408.5	497	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	84.0452259203341	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGCAGTCATGGGCCACC	-82447512	True	NA	NA	False	NA	NA	NA	82450743	82444470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82444592_82445863_82445961_82446622_82446697_82447579_82447622_82449173_82449293_82450699
transcript_9352.nic	chr1	+	2011	4	ISM	ENSG00000157077.16	ENST00000361625.5	2625	5	-317	25108	-32	-25108	5prime_fragment	FALSE	canonical	2	6	junction_3	2.94392028877595	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAGGAAAGCAAGTCAGAA	52139427	True	NA	NA	False	AAAAAG	-4	NA	52142056	52238939	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_52142404_52216368_52216475_52233170_52233277_52237487
transcript_93524.known	chr17	-	1079	5	FSM	ENSG00000178927.18	ENST00000578941.5	1079	5	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_4	25.9265790261654	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACAGACAGACAGAGGCCC	-82450635	False	NA	NA	False	NA	NA	NA	82450829	82445250	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82445961_82446622_82446697_82447579_82447622_82449169_82449293_82450699
transcript_93528.known	chr17	+	742	2	FSM	ENSG00000169660.17	ENST00000583978.5	742	2	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACGATCACCAGAAGCTAG	82418482	True	NA	NA	False	NA	NA	NA	82418672	82420422	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82418741_82419748
transcript_9353.nic	chr1	+	2502	4	ISM	ENSG00000157077.16	ENST00000361625.5	2625	5	-486	24786	-201	-24786	5prime_fragment	FALSE	canonical	2	6	junction_3	2.94392028877595	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATATTCTTGGGAAAGCAA	52141473	True	NA	NA	False	AATAAA	-3	NA	52141887	52239261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_52142404_52216368_52216475_52233170_52233277_52237487
transcript_93530.known	chr17	+	1760	13	NNC	ENSG00000141562.19	novel	1722	12	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	307.759104928947	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGATTACTTTGGTTTCT	82453958	True	NA	16	True	ATTAAA	-21	NA	82458663	82488265	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr17_+_82458831_82459991_82460073_82464286_82464431_82468763_82468897_82472563_82472699_82478799_82478919_82481081_82481212_82481812_82481836_82483186_82483305_82483715_82483780_82484812_82484951_82485496_82485655_82487915
transcript_93532.known	chr17	+	1454	12	FSM	ENSG00000141562.19	ENST00000582907.5	1454	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	289.685523420379	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGGATCAACTCCCCCAAG	82454020	True	NA	NA	False	NA	NA	NA	82458725	82488065	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82458831_82459991_82460073_82464286_82464431_82468763_82468897_82472563_82472699_82478570_82478668_82478799_82478919_82481081_82481212_82483715_82483780_82484812_82484951_82485496_82485655_82487915
transcript_93533.known	chr17	+	1668	12	FSM	ENSG00000141562.19	ENST00000457415.7	1668	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	288.908089705914	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGGGGCTGCCCTGAGTG	82453997	True	NA	-34	True	NA	NA	NA	82458702	82488215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82458831_82459991_82460073_82464286_82464431_82468763_82468897_82472563_82472699_82478799_82478919_82480406_82480545_82481081_82481212_82483715_82483780_82484812_82484951_82485496_82485655_82487915
transcript_93535.known	chr17	+	1722	12	FSM	ENSG00000141562.19	ENST00000374611.9	1722	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	288.986716501035	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGGATTACTTTGGTTT	82453991	True	NA	14	True	ATTAAA	-19	NA	82458696	82488263	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82458831_82459991_82460073_82464286_82464431_82468763_82468897_82472563_82472699_82478799_82478919_82481081_82481219_82483173_82483305_82483715_82483780_82484812_82484951_82485496_82485655_82487915
transcript_93537.known	chr17	+	1766	11	FSM	ENSG00000141562.19	ENST00000390006.8	1766	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	259.339179454243	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCGCTCAATGGATTAC	82457807	True	NA	6	True	ATTAAA	-11	NA	82458184	82488255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82458509_82459991_82460073_82464286_82464431_82468763_82468897_82472563_82472699_82478799_82478919_82481081_82481212_82483715_82483780_82484812_82484951_82485496_82485655_82487915
transcript_93541.known	chr17	+	3814	11	FSM	ENSG00000141562.19	ENST00000309794.16	3814	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	198.851929837254	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTGAATGGTTGAGTG	82454035	True	NA	27	True	AATAAA	-14	NA	82458740	82490537	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82458831_82459991_82460073_82464286_82464431_82468763_82468897_82472563_82472699_82478799_82478919_82481081_82481212_82483715_82483780_82484812_82484951_82485496_82485655_82487915
transcript_93545.known	chr17	+	2598	10	FSM	ENSG00000141562.19	ENST00000577812.5	2598	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	209.43722357137	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCTCAATGGATTACTTTG	82454006	True	NA	10	True	ATTAAA	-15	NA	82458711	82488259	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82458831_82459991_82460073_82464286_82464431_82468763_82468897_82472563_82472699_82478799_82478919_82481081_82481212_82483715_82484951_82485496_82485655_82487915
transcript_93547.known	chr17	+	1487	10	FSM	ENSG00000141562.19	ENST00000345415.11	1487	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	207.362151147202	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAATGGATTACTTTGGTT	82458271	False	NA	13	True	ATTAAA	-18	NA	82458648	82488262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82458831_82459991_82460073_82468763_82468897_82472563_82472699_82478799_82478919_82481081_82481212_82483715_82483780_82484812_82484951_82485496_82485655_82487915
transcript_93550.known	chr17	-	920	3	FSM	ENSG00000265458.2	ENST00000653651.1	920	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCAGGCTGGAGTGCAGT	-82458013	False	NA	NA	False	NA	NA	NA	82458207	82454139	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82454414_82457437_82457549_82457672
transcript_93568.known	chr17	-	2322	10	FSM	ENSG00000141580.16	ENST00000572583.5	2322	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	190.757618814564	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGGACCTGTAATGGGAA	-82648272	False	NA	-24	True	AATAAA	-20	NA	82648318	82614575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82616026_82616523_82616646_82617295_82617398_82619042_82619095_82621608_82621800_82625388_82625484_82627203_82627292_82630920_82631023_82643948_82644024_82648273
transcript_93572.known	chr17	-	2496	10	FSM	ENSG00000141580.16	ENST00000392325.9	2496	10	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_8	41.8807831827438	1517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAAGTAGAATTGTGTGT	-82643029	True	NA	-10	True	AATAAA	-34	NA	82648444	82614561	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82616026_82616523_82616646_82617295_82617398_82619042_82619129_82621608_82621800_82625388_82625484_82627203_82627292_82630920_82631023_82643948_82644024_82648273
transcript_93582.nic	chr17	-	2541	9	NIC	ENSG00000141580.16	novel	2496	10	NA	NA	-52	0	intron_retention	FALSE	canonical	3	80	junction_7	187.266813330606	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGGACCTGTAATGGGAA	NA	False	NA	-24	True	AATAAA	-20	NA	82648605	82614575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr17_-_82616026_82616523_82616646_82617295_82617398_82619042_82619129_82621608_82621800_82625388_82625484_82627203_82627292_82643948_82644024_82648273
transcript_93595.known	chr17	+	1809	1	FSM	ENSG00000279613.1	ENST00000624661.1	1809	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATAGGTCCACCCAGAA	NA	False	NA	NA	False	NA	NA	NA	82648848	82650657	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82648800_82650700
transcript_93596.known	chr17	-	2189	7	FSM	ENSG00000141542.11	ENST00000269347.10	2189	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	11.4515889242013	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGGCGACCGGTTCTTT	-82698311	True	NA	-15	True	AATAAA	-26	NA	82698687	82657066	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82658135_82658490_82658714_82659579_82659658_82660986_82661048_82664495_82664557_82696388_82696854_82698454
transcript_93597.known	chr17	-	3829	6	FSM	ENSG00000141542.11	ENST00000571995.6	3829	6	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_2	3.6	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAACTTTGTCATTTTCT	-82698322	True	NA	NA	False	ATTAAA	-6	NA	82698698	82654972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82658135_82658490_82658714_82659579_82659658_82660986_82661048_82664495_82664557_82698454
transcript_93604.known	chr17	+	1822	6	FSM	ENSG00000141560.15	ENST00000269373.11	1822	6	0	0	0	0	multi-exon	TRUE	canonical	3	299	junction_4	15.3831076184235	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTACAAGATTGTATATTTC	82714230	True	NA	35	True	AATAAA	-45	NA	82716705	82728013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82716897_82718905_82719058_82720271_82720364_82722803_82722887_82726479_82726603_82726832
transcript_93610.known	chr17	+	627	4	FSM	ENSG00000141560.15	ENST00000573158.5	627	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	141.951478408019	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACATCATGAGGAATCTGG	82714311	True	NA	NA	False	NA	NA	NA	82716786	82727143	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82716897_82722803_82722887_82726479_82726603_82726832
transcript_93614.known	chr17	+	7258	40	FSM	ENSG00000141556.22	ENST00000682479.1	7258	40	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	120.332953607339	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACCATAAAAACATAGAAAGA	82751213	False	NA	-10	True	AATAAA	-6	NA	82752041	82945900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82752378_82756164_82756216_82759510_82759601_82763964_82764063_82766266_82766369_82768419_82768567_82772451_82772508_82781588_82781722_82797756_82797803_82800863_82800997_82805874_82806012_82807607_82807669_82809707_82809783_82814839_82814935_82870223_82870381_82884144_82884203_82889667_82889698_82893546_82893633_82900650_82900732_82903404_82903479_82905935_82906054_82907760_82907822_82909284_82909308_82911757_82911790_82920555_82920619_82921500_82921578_82923651_82923734_82924938_82925058_82926399_82926492_82927185_82927324_82927904_82927989_82929112_82929272_82929361_82929501_82930521_82930644_82932657_82932736_82937270_82937361_82938048_82938137_82939366_82939477_82941398_82941484_82942448
transcript_93617.known	chr17	+	3975	40	FSM	ENSG00000141556.22	ENST00000539345.6	3975	40	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_35	119.9461143533	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTTTGTCTCTGAGCCT	82744918	False	NA	24	True	TATAAA	-21	NA	82752157	82942709	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82752378_82756164_82756216_82763964_82764063_82766266_82766369_82768419_82768567_82772451_82772508_82781588_82781722_82797756_82797803_82800863_82800997_82805874_82806012_82807607_82807669_82809707_82809783_82814839_82814935_82870223_82870381_82884144_82884203_82889667_82889698_82893546_82893633_82900650_82900732_82903404_82903479_82905935_82906054_82907760_82907822_82909284_82909308_82911757_82911790_82920555_82920619_82921500_82921578_82923651_82923734_82924938_82925058_82926399_82926492_82927185_82927324_82927904_82927989_82929112_82929272_82929361_82929501_82930521_82930644_82932657_82932736_82937270_82937361_82937845_82937960_82938048_82938137_82939366_82939477_82941398_82941484_82942448
transcript_93625.known	chr17	+	7159	39	FSM	ENSG00000141556.22	ENST00000355528.9	7159	39	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_13	72.1403535437572	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGATGGCTTATATGTGG	82744825	True	NA	4	True	AATAAA	-20	NA	82752064	82945914	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82752378_82756164_82756216_82763964_82764063_82766266_82766369_82768419_82768567_82772451_82772508_82781588_82781722_82797756_82797803_82800863_82800997_82805874_82806012_82807607_82807669_82809707_82809783_82814839_82814935_82870223_82870381_82884144_82884203_82889667_82889698_82893546_82893633_82900650_82900732_82903404_82903479_82905935_82906054_82907760_82907822_82909284_82909308_82911757_82911790_82920555_82920619_82921500_82921578_82923651_82923734_82924938_82925058_82926399_82926492_82927185_82927324_82927904_82927989_82929112_82929272_82929361_82929501_82930521_82930644_82932657_82932736_82937270_82937361_82938048_82938137_82939366_82939477_82941398_82941484_82942448
transcript_93639.known	chr17	+	7075	38	FSM	ENSG00000141556.22	ENST00000683041.1	7075	38	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_20	99.4208503205008	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACCATAAAAACATAGAAAGA	82744834	True	NA	-10	True	AATAAA	-6	NA	82752073	82945900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82752378_82756164_82756216_82763964_82764063_82766266_82766369_82768419_82768567_82772451_82772508_82781588_82781722_82797756_82797803_82800863_82800997_82805874_82806012_82807607_82807669_82809707_82809783_82814839_82814935_82870223_82870381_82884144_82884203_82889667_82889698_82893546_82893633_82900650_82900732_82903404_82903479_82905935_82906054_82909284_82909308_82911757_82911790_82920555_82920619_82921500_82921578_82923651_82923734_82924938_82925058_82926399_82926492_82927185_82927324_82927904_82927989_82929112_82929272_82929361_82929501_82930521_82930644_82932657_82932736_82937270_82937361_82938048_82938137_82939366_82939477_82941398_82941484_82942448
transcript_9364.known	chr1	-	5338	25	FSM	ENSG00000154222.15	ENST00000284376.8	5338	25	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_12	7.97870429469737	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGAAGTCTTGCTTACAA	-52363870	True	NA	-2	True	AATAAA	-20	NA	52366205	52350596	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_52353224_52353517_52353648_52354607_52354699_52354839_52354940_52355397_52355450_52355607_52355667_52355770_52355845_52356185_52356303_52356383_52356443_52357000_52357127_52357525_52357699_52357780_52357899_52358330_52358462_52358685_52358759_52359026_52359158_52359249_52359358_52359458_52359535_52359704_52359884_52360073_52360234_52360423_52360550_52360973_52361133_52361512_52361617_52362601_52362747_52364551_52364635_52366068
transcript_93641.known	chr17	+	7072	38	FSM	ENSG00000141556.22	ENST00000684544.1	7072	38	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_17	98.8371985582648	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACCATAAAAACATAGAAAGA	82751968	False	NA	-10	True	AATAAA	-6	NA	82752056	82945900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82752378_82756164_82756216_82763964_82764063_82766266_82766369_82768419_82768567_82772451_82772508_82781588_82781722_82797756_82797803_82800863_82800997_82805874_82806012_82807607_82807669_82809707_82809783_82814839_82814935_82870223_82870381_82884144_82884203_82889667_82889698_82893546_82893633_82903404_82903479_82905935_82906054_82907760_82907822_82909284_82909308_82911757_82911790_82920555_82920619_82921500_82921578_82923651_82923734_82924938_82925058_82926399_82926492_82927185_82927324_82927904_82927989_82929112_82929272_82929361_82929501_82930521_82930644_82932657_82932736_82937270_82937361_82938048_82938137_82939366_82939477_82941398_82941484_82942448
transcript_93645.known	chr17	+	7050	38	FSM	ENSG00000141556.22	ENST00000683184.1	7050	38	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_2	99.6760054517614	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACCATAAAAACATAGAAAGA	82744822	True	NA	-10	True	AATAAA	-6	NA	82752061	82945900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82752378_82756164_82756216_82766266_82766369_82768419_82768567_82772451_82772508_82781588_82781722_82797756_82797803_82800863_82800997_82805874_82806012_82807607_82807669_82809707_82809783_82814839_82814935_82870223_82870381_82884144_82884203_82889667_82889698_82893546_82893633_82900650_82900732_82903404_82903479_82905935_82906054_82907760_82907822_82909284_82909308_82911757_82911790_82920555_82920619_82921500_82921578_82923651_82923734_82924938_82925058_82926399_82926492_82927185_82927324_82927904_82927989_82929112_82929272_82929361_82929501_82930521_82930644_82932657_82932736_82937270_82937361_82938048_82938137_82939366_82939477_82941398_82941484_82942448
transcript_93646.known	chr17	+	7111	38	FSM	ENSG00000141556.22	ENST00000682722.1	7111	38	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	94.0009014146357	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACCATAAAAACATAGAAAGA	82751959	True	NA	-10	True	AATAAA	-6	NA	82752047	82945900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82752378_82763964_82764063_82766266_82766369_82768419_82768567_82772451_82772508_82781588_82781722_82797756_82797803_82800863_82800997_82805874_82806012_82807607_82807669_82809707_82809783_82814839_82814935_82870223_82870381_82884144_82884203_82889667_82889698_82893546_82893633_82900650_82900732_82903404_82903479_82905935_82906054_82907760_82907822_82909284_82909308_82911757_82911790_82920555_82920619_82921500_82921578_82923651_82923734_82924938_82925058_82926399_82926492_82927185_82927324_82927904_82927989_82929112_82929272_82929361_82929501_82930521_82930644_82932657_82932736_82937270_82937361_82938048_82938137_82939366_82939477_82941398_82941484_82942448
transcript_93653.known	chr17	+	7064	37	FSM	ENSG00000141556.22	ENST00000683282.1	7064	37	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_20	103.600055263582	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACCATAAAAACATAGAAAGA	82744822	True	NA	-10	True	AATAAA	-6	NA	82752061	82945900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82752378_82756164_82756216_82763964_82764063_82766266_82766369_82768419_82768567_82772451_82772508_82781588_82781722_82797756_82797803_82800863_82800997_82805874_82806012_82807607_82807669_82809707_82809783_82814839_82814935_82870223_82870381_82884144_82884203_82889667_82889698_82893546_82893633_82900650_82900732_82903404_82903479_82905935_82906054_82911757_82911790_82920555_82920619_82921500_82921578_82923651_82923734_82924938_82925058_82926399_82926492_82927185_82927324_82927904_82927989_82929112_82929272_82929361_82929501_82930521_82930644_82932657_82932736_82937270_82937361_82938048_82938137_82939366_82939477_82941398_82941484_82942448
transcript_93687.known	chr17	+	6789	34	FSM	ENSG00000141556.22	ENST00000684408.1	6789	34	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_17	106.992632102171	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACCATAAAAACATAGAAAGA	82744824	True	NA	-10	True	AATAAA	-6	NA	82752063	82945900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82752378_82756164_82756216_82763964_82764063_82766266_82766369_82768419_82768567_82772451_82772508_82781588_82781722_82797756_82797803_82800863_82800997_82805874_82806012_82807607_82807669_82809707_82809783_82814839_82814935_82870223_82870381_82884144_82884203_82889667_82889698_82893546_82893633_82911757_82911790_82920555_82920619_82921500_82921578_82923651_82923734_82924938_82925058_82926399_82926492_82927185_82927324_82927904_82927989_82929112_82929272_82929361_82929501_82930521_82930644_82932657_82932736_82937270_82937361_82938048_82938137_82939366_82939477_82941398_82941484_82942448
transcript_93698.known	chr17	+	1910	13	FSM	ENSG00000141556.22	ENST00000682107.1	1910	13	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_2	30.9834185044553	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACGTGGTGCTCCCTGGA	82744834	True	NA	NA	False	NA	NA	NA	82752073	82815406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_82752378_82756164_82756216_82763964_82764063_82766266_82766369_82768419_82768567_82772451_82772508_82781588_82781722_82797756_82797803_82800863_82800997_82805874_82806012_82807607_82807669_82809707_82809783_82814839
transcript_937.known	chr1	-	424	2	FSM	ENSG00000225285.1	ENST00000454562.1	424	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAAGGAAGGCGGCCGCGG	-1434318	False	NA	NA	False	NA	NA	NA	1434488	1430549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_1430663_1434177
transcript_93710.known	chr17	-	1383	13	FSM	ENSG00000175711.9	ENST00000320865.4	2985	13	-40	1642	-1	0	multi-exon	TRUE	canonical	3	120	junction_5	16.1012421881046	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAACCCAAGGCTCTTTTA	-83050426	True	NA	-6	True	AATAAA	-21	NA	83051810	82943790	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82944050_82946878_82946984_82956694_82956770_82957180_82957250_82957358_82957495_82961056_82961182_82965650_82965747_83005114_83005211_83014453_83014520_83035034_83035100_83048470_83048571_83048668_83048786_83051736
transcript_93714.known	chr17	-	471	3	FSM	ENSG00000175711.9	ENST00000573363.5	471	3	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_2	4.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAACCCAAGGCTCTTTTA	NA	False	NA	-6	True	AATAAA	-21	NA	82956801	82943790	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_-_82944050_82946878_82946984_82956694
transcript_93715.known	chr17	+	1690	4	FSM	ENSG00000176845.13	ENST00000320095.12	1690	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	21.4527905462721	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGAAGCCGGAGTCTGTC	83078434	True	NA	34	True	AATAAA	-17	NA	83079608	83095122	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr17_+_83079986_83084937_83085324_83093166_83093227_83094255
transcript_93726.known	chr18	-	2108	21	FSM	ENSG00000079134.13	ENST00000261600.11	2108	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	94.2741215816939	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGTACAGTCGGCTGGT	-262367	True	NA	-13	True	AATAAA	-15	NA	268047	214519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_214922_215428_215505_216485_216634_218885_218970_223439_223506_224083_224180_224923_224995_225088_225140_225336_225404_226800_226902_246323_246456_247848_247958_252538_252613_254272_254356_259179_259276_259681_259731_260185_260305_264025_264093_265302_265364_265456_265531_267965
transcript_93730.nic	chr18	-	2159	21	NIC	ENSG00000079134.13	novel	2108	21	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	123.431316933751	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGTACAGTCGGCTGGT	-262397	True	NA	-13	True	AATAAA	-15	NA	268077	214519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_214922_215428_215505_216485_216634_218885_218970_223439_223506_224083_224201_224923_224995_225088_225140_225336_225404_226800_226902_246323_246456_247848_247958_252538_252613_254272_254356_259179_259276_259681_259731_260185_260305_264025_264093_265302_265364_265456_265531_267965
transcript_93734.known	chr18	-	2277	20	FSM	ENSG00000079134.13	ENST00000579232.5	2277	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	96.7223802259079	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGTACAGTCGGCTGGT	-262339	True	NA	-13	True	AATAAA	-15	NA	268019	214519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_214922_215428_215505_216485_216634_218885_218970_223439_223506_224083_224180_224923_224995_225088_225404_226800_226902_246323_246456_247848_247958_252538_252613_254272_254356_259179_259276_259681_259731_260185_260305_264025_264093_265302_265364_265456_265531_267965
transcript_93739.nnic	chr18	+	3049	17	NNC	ENSG00000101557.15	novel	4972	16	NA	NA	-64	65283	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	149.708871125762	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATATAACTCAGTATGAA	147306	True	NA	NA	False	AATAAA	-1	NA	158471	279912	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr18_+_158715_163307_163454_166786_166820_178932_179038_180235_180340_192841_192901_196636_196768_197615_197697_198046_198133_199201_199317_202879_202946_203097_203191_204563_204693_209970_210032_210385_210494_211132_212581_279871
transcript_9374.known	chr1	-	5642	24	FSM	ENSG00000154222.15	ENST00000371586.6	5642	24	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_11	11.6891043575002	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTCTTGCTTACAATTAA	-52363858	True	NA	2	True	AATAAA	-24	NA	52366193	52350592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_52353648_52354607_52354699_52354839_52354940_52355397_52355450_52355607_52355667_52355770_52355845_52356185_52356303_52356383_52356443_52357000_52357127_52357525_52357699_52357780_52357917_52358330_52358462_52358685_52358759_52359026_52359158_52359249_52359358_52359458_52359535_52359704_52359884_52360073_52360234_52360423_52360550_52360973_52361133_52361512_52361617_52362601_52362747_52364551_52364635_52366068
transcript_93741.known	chr18	+	4972	16	FSM	ENSG00000101557.15	ENST00000261601.8	4972	16	0	0	0	0	multi-exon	FALSE	canonical	3	512	junction_10	46.9545406631658	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGTCTCATTGTCATT	147391	True	NA	10	True	AATAAA	-22	NA	158556	214629	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_158715_163307_163454_166786_166820_178932_179038_180235_180340_192841_192901_196636_196768_197615_197697_198046_198133_199201_199317_202879_202946_203097_203191_204563_204693_209970_210032_210385_210494_211132
transcript_93756.known	chr18	+	1803	15	FSM	ENSG00000101557.15	ENST00000582707.5	1803	15	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	151.095455704974	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCATTTGGAACAAAAGAGG	158372	True	NA	NA	False	NA	NA	NA	158382	211391	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_158715_163307_163454_166786_166820_180235_180340_192841_192901_196636_196768_197615_197697_198046_198133_199201_199317_202879_202946_203097_203191_204563_204693_209970_210032_210385_210494_211132
transcript_93763.known	chr18	+	1681	15	FSM	ENSG00000101557.15	ENST00000400266.7	1681	15	0	0	0	0	multi-exon	FALSE	canonical	1	16	junction_2	154.587551971334	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGCTTTAGAGGAAGACAC	147370	True	NA	NA	False	AATAAA	-29	NA	158535	211350	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_158715_163307_163454_178932_179038_180235_180340_192841_192901_196636_196768_197615_197697_198046_198133_199201_199317_202879_202946_203097_203191_204563_204693_209970_210032_210385_210494_211132
transcript_93765.known	chr18	+	3189	14	FSM	ENSG00000101557.15	ENST00000578942.5	3189	14	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	156.235711772745	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAAAATT	147395	True	NA	NA	False	NA	NA	NA	158560	212601	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_158715_163307_163454_166786_166820_180235_180340_192841_192901_196636_196768_197615_197697_198046_198133_199201_199317_202879_202946_203097_203191_204563_204693_209970_210494_211132
transcript_93767.nic	chr18	-	912	11	ISM	ENSG00000079134.13	ENST00000582313.5	1811	12	-50	1440	-27	-320	5prime_fragment	FALSE	canonical	3	389	junction_7	22.8221383748325	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGGAAGAATTGAAAACAG	-262397	True	NA	NA	False	TATAAA	-30	NA	268077	246387	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_246456_247848_247958_252538_252613_254272_254356_259179_259276_259681_259731_260185_260305_264025_264093_265302_265364_265456_265531_267965
transcript_93768.nic	chr18	+	1142	10	ISM	ENSG00000101557.15	ENST00000261601.8	4972	16	-199	15388	-25	1131	5prime_fragment	FALSE	canonical	3	514	junction_3	44.0605643782888	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAGGAAAATCAACTTCA	158328	False	NA	5	True	NA	NA	NA	158357	199241	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_158715_163307_163454_166786_166820_178932_179038_180235_180340_192841_192901_196636_196768_197615_197697_198046_198133_199201
transcript_93771.known	chr18	-	552	3	FSM	ENSG00000079134.13	ENST00000580870.5	552	3	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_1	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCATTCCCTCATTTTCC	-262339	True	NA	NA	False	NA	NA	NA	268019	264939	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_265364_265456_265531_267965
transcript_9378.known	chr1	-	2521	19	FSM	ENSG00000154222.15	ENST00000438021.5	2521	19	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	13.2329554941861	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAGACACGTTTATTTA	-52360184	False	NA	-25	True	TATAAA	-5	NA	52360196	52352537	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_52353224_52353602_52353648_52354607_52354699_52354839_52354940_52355397_52355450_52355607_52355667_52355770_52355845_52356185_52356303_52356383_52356443_52357000_52357127_52357525_52357699_52357780_52357899_52358330_52358462_52358685_52358759_52359026_52359158_52359249_52359358_52359458_52359535_52359704_52359884_52360073
transcript_93784.known	chr18	-	5362	16	FSM	ENSG00000132199.20	ENST00000647584.2	5362	16	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_11	21.7300611033553	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGGCTCATGCCTGAAAT	-710562	True	NA	NA	False	ATTAAA	-24	NA	712630	670317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_674407_675320_675403_677344_677445_677742_677873_678695_678738_683245_683381_685920_686009_688573_688609_690548_690632_691067_691107_691203_691277_693881_693909_694247_694335_697239_697356_706469_706579_712503
transcript_93793.known	chr18	-	1296	15	FSM	ENSG00000132199.20	ENST00000585128.6	1296	15	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_13	37.9056293272368	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTATTACTTGATTCTT	-710455	True	NA	NA	False	NA	NA	NA	712523	674160	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_674407_675320_675403_677344_677445_677742_677873_678695_678738_683245_683381_685920_686009_688573_688609_690548_690632_691067_691107_691203_691277_693881_693909_694247_694335_706469_706579_712503
transcript_938.known	chr1	+	4492	3	FSM	ENSG00000179403.12	ENST00000476993.2	4492	3	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_1	3.5	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGTGATAAACCAAGTCAAT	1433091	True	NA	NA	False	AATAAA	-23	NA	1435689	1442882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1435822_1436926_1437485_1439080
transcript_93804.known	chr18	-	1745	14	FSM	ENSG00000132199.20	ENST00000581475.5	1745	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_9	39.6145630982781	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGGGGTATCTGGTATGCA	-710539	True	NA	73	True	AATAAA	-16	NA	712607	673913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_674407_675320_675403_677344_677445_677742_677873_678695_678738_683245_683381_685920_686009_688573_688609_690548_690746_693881_693909_694247_694335_697239_697356_706469_706579_712503
transcript_93815.known	chr18	-	1397	13	FSM	ENSG00000132199.20	ENST00000580982.5	1397	13	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_9	51.1172399707009	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCTGGCACCTAGACATTA	-710547	True	NA	-53	True	NA	NA	NA	712615	674039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_674407_675320_675403_677344_677445_677742_677873_678695_678738_683245_683381_685920_686009_688573_688609_690548_690632_693881_693909_694247_694335_706469_706579_712503
transcript_93829.known	chr18	+	1613	7	FSM	ENSG00000176890.16	ENST00000323274.15	1613	7	0	0	0	0	multi-exon	FALSE	canonical	3	600	junction_1	116.514305273358	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCTGTATTCTGGTTT	651141	True	NA	9	True	ATTAAA	-19	NA	657652	673578	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_657948_659640_659715_662145_662321_669071_669174_670691_670868_671379_671452_672859
transcript_93835.known	chr18	+	1327	6	FSM	ENSG00000176890.16	ENST00000323224.7	1327	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	305.469212851312	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTGCATTCGTCCACGC	651231	False	NA	5	True	AATAAA	-5	NA	657742	673484	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_657948_659640_659715_662145_662321_670691_670868_671379_671452_672859
transcript_9385.known	chr1	-	3080	17	FSM	ENSG00000085840.13	ENST00000371566.1	3080	17	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_16	54.8506138867196	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTTTGTGAAGTTATTA	-52399433	True	NA	-4	True	ATTAAA	-17	NA	52404387	52372830	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_52373376_52374809_52374898_52375429_52375600_52381641_52381762_52383419_52383570_52383829_52383938_52384549_52384722_52385160_52385263_52385851_52385950_52388441_52388638_52389216_52389322_52393442_52393804_52396045_52396365_52397684_52397864_52401361_52401490_52402128_52402226_52404245
transcript_93850.known	chr18	-	844	2	FSM	ENSG00000176912.6	ENST00000323813.4	991	2	0	147	0	0	multi-exon	FALSE	canonical	3	277	junction_1	0	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCACGTAGTGTTTGGTC	-658264	False	NA	-9	True	AATAAA	-20	NA	658340	649619	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_649965_657841
transcript_93852.known	chr18	-	4605	12	FSM	ENSG00000176105.14	ENST00000314574.5	4605	12	0	0	0	0	multi-exon	FALSE	canonical	3	364	junction_3	45.5277592190098	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGTGGTCAATTTTCT	-804607	True	NA	0	True	ATTAAA	-22	NA	812242	721587	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_724633_732833_732966_736807_736962_739734_739812_742917_743098_743259_743416_745707_745858_745947_746052_747919_748019_751704_751805_756556_756836_812113
transcript_93853.known	chr18	-	4639	12	FSM	ENSG00000176105.14	ENST00000584307.5	4639	12	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_11	114.274354512172	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGTGGTCAATTTTCT	-812502	False	NA	0	True	ATTAAA	-22	NA	812546	721587	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_724633_732833_732966_736807_736962_739734_739812_742917_743098_743259_743416_745707_745858_745947_746052_747919_748019_751704_751805_756556_756836_812383
transcript_93857.nic	chr18	-	1309	8	ISM	ENSG00000176105.14	ENST00000314574.5	4605	12	-194	21412	-79	8724	5prime_fragment	FALSE	canonical	3	392	junction_6	31.7129986868837	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGACATGATAAACTTGT	-812392	False	NA	NA	False	AATGAA	-5	NA	812436	742999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_743098_743259_743416_745707_745858_745947_746052_747919_748019_751704_751805_756556_756836_812113
transcript_93859.known	chr18	-	3684	9	FSM	ENSG00000101574.15	ENST00000574538.2	3684	9	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_7	14.0484652186636	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATTTGAATTCTTTCCA	-2570661	True	NA	-4	True	ATTAAA	-22	NA	2571505	2537529	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_2539146_2544194_2544287_2544652_2544760_2547354_2547530_2552694_2552765_2554668_2555039_2563796_2563860_2566820_2567655_2571148
transcript_93863.known	chr18	+	2126	17	FSM	ENSG00000080986.13	ENST00000261597.9	2126	17	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_4	26.943227349373	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTCTCATTTCTTA	2567824	True	NA	14	True	AATAAA	-20	NA	2571556	2616635	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_2571684_2572976_2573087_2574988_2575067_2577745_2577870_2577968_2578142_2578926_2579030_2585112_2585203_2587829_2587924_2589203_2589311_2590017_2590163_2595415_2595622_2599018_2599172_2601395_2601486_2606414_2606508_2608699_2608831_2610758_2610862_2616436
transcript_93866.nic	chr18	+	1725	14	ISM	ENSG00000080986.13	ENST00000261597.9	2126	17	-37	10133	-37	-8812	5prime_fragment	FALSE	canonical	3	294	junction_4	26.6689101620364	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGGTAAGAACTTTGCCA	2567787	True	NA	NA	False	NA	NA	NA	2571519	2606502	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_2571684_2572976_2573087_2574988_2575067_2577745_2577870_2577968_2578142_2578926_2579030_2585112_2585203_2587829_2587924_2589203_2589311_2590017_2590163_2595415_2595622_2599018_2599172_2601395_2601486_2606414
transcript_93869.nic	chr18	+	1037	9	ISM	ENSG00000080986.13	ENST00000261597.9	2126	17	-37	27331	-37	6425	5prime_fragment	FALSE	canonical	3	294	junction_4	24.1786967183924	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCGGTTAGTAAACATGT	2567787	True	NA	NA	False	AAGAAA	-9	NA	2571519	2589304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_2571684_2572976_2573087_2574988_2575067_2577745_2577870_2577968_2578142_2578926_2579030_2585112_2585203_2587829_2587924_2589203
transcript_93883.nic	chr18	+	1747	7	ISM	ENSG00000101596.17	ENST00000684915.1	3534	14	-753	18517	-560	-8505	5prime_fragment	FALSE	canonical	3	48	junction_6	12.7801930084539	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGCAATATATAGTGGATA	2655091	True	NA	40	True	AATAAA	-1	NA	2655165	2688711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_2656262_2666156_2666233_2666869_2667032_2673280_2673364_2674014_2674146_2688393_2688509_2688627
transcript_93885.known	chr18	+	8833	48	FSM	ENSG00000101596.17	ENST00000320876.11	8833	48	0	0	0	0	multi-exon	TRUE	canonical	3	48	junction_6	29.5495532585825	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTCATCAGTTTTCATGTG	2654744	True	NA	19	True	AATAAA	-28	NA	2655725	2805017	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_2656262_2666156_2666233_2666869_2667032_2673280_2673364_2674014_2674146_2688393_2688509_2688627_2688748_2694526_2694694_2697031_2697123_2697830_2698042_2700538_2700660_2700734_2700919_2703691_2703887_2705693_2705808_2706363_2706471_2707562_2707646_2707806_2707921_2718157_2718236_2718314_2718435_2722518_2722664_2724898_2724996_2726451_2726525_2728456_2728597_2729274_2729410_2732264_2732493_2738396_2738546_2739431_2739521_2740702_2740822_2743760_2743929_2747521_2747648_2750042_2750123_2750349_2750508_2751277_2751394_2752487_2752553_2760651_2760740_2762104_2762237_2763636_2763790_2769693_2769821_2769988_2770109_2771532_2771619_2772249_2772373_2775733_2775925_2777805_2777916_2778168_2778240_2784449_2784622_2795948_2796108_2796406_2796522_2802527
transcript_93888.known	chr18	+	775	4	FSM	ENSG00000132205.11	ENST00000583776.1	775	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	2.62466929133727	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCCAGCGTGGCCCAGCTG	2905994	False	NA	NA	False	NA	NA	NA	2906568	2913162	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_2907086_2908942_2908976_2909690_2909820_2913066
transcript_93890.known	chr18	-	6052	20	FSM	ENSG00000101577.10	ENST00000677752.1	6052	20	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_13	7.75168643969038	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAATGCATTTGGCTCTTT	-3012432	True	NA	NA	False	AATAAA	-16	NA	3013144	2916998	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_2920438_2920777_2920882_2921532_2921648_2922046_2922200_2923774_2923862_2924397_2924547_2925223_2925369_2926722_2926806_2927721_2927812_2928590_2928661_2929064_2929159_2931255_2931444_2934350_2934451_2937691_2938038_2939479_2939604_2940604_2940713_2951054_2951357_2954503_2954600_2960648_2960850_3013086
transcript_93895.nic	chr18	-	709	4	ISM	ENSG00000101577.10	ENST00000677752.1	6052	20	-174	34178	-174	3339	5prime_fragment	FALSE	canonical	3	20	junction_1	3.2659863237109	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CGAAGGAGAAAGAAATACAA	-3013307	False	NA	NA	False	AAAAAG	-7	NA	3013318	2951176	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_2951357_2954503_2954600_2960648_2960850_3013086
transcript_93896.known	chr18	+	1004	5	FSM	ENSG00000101608.13	ENST00000578611.5	1004	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	1851.53468439022	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAATTAAACTTTATGATA	3229354	True	NA	-11	True	AATATA	-40	NA	3247812	3256211	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3247910_3249360_3249444_3253232_3253429_3253888_3254051_3255745
transcript_93899.known	chr18	+	947	4	FSM	ENSG00000101608.13	ENST00000579226.5	947	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	1729.07920260724	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAAATACTTACTTGTTT	3247469	False	NA	5	True	ATTAAA	-7	NA	3247480	3256227	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3247588_3253232_3253429_3253888_3254051_3255745
transcript_939.known	chr1	+	2147	3	FSM	ENSG00000179403.12	ENST00000338660.5	2147	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	114.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGCAGTCTCGCTAGGA	1435511	False	NA	15	True	AGTAAA	-15	NA	1435522	1440765	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1435822_1437321_1437485_1439080
transcript_9390.nnic	chr1	-	3099	16	NIC	ENSG00000085840.13	novel	3121	17	NA	NA	-88	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_5	60.5058674840713	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTTTGTGAAGTTATTA	NA	False	NA	-4	True	ATTAAA	-17	NA	52404511	52372830	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_52373376_52374809_52374898_52375429_52375600_52381641_52381762_52383419_52383570_52384549_52384722_52385160_52385263_52385851_52385950_52388441_52388638_52389216_52389322_52393442_52393804_52396045_52396365_52397684_52397864_52401361_52401490_52402128_52402229_52404245
transcript_93901.known	chr18	+	958	4	FSM	ENSG00000101608.13	ENST00000217652.8	958	4	0	0	0	0	multi-exon	FALSE	canonical	3	3328	junction_1	223.402476858845	940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACTTGTTTAAACTTCTT	3229342	True	NA	14	True	ATTAAA	-16	NA	3247800	3256236	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3247910_3253232_3253429_3253888_3254051_3255745
transcript_93903.known	chr18	+	1163	4	FSM	ENSG00000118680.14	ENST00000237500.10	1163	4	0	0	0	0	multi-exon	FALSE	canonical	3	2517	junction_2	103.866367136924	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACGCTTCTAGTCAGATG	3239448	True	NA	NA	False	AGTAAA	-21	NA	3262132	3278461	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3262238_3272883_3273083_3277252_3277415_3277764
transcript_93905.known	chr18	+	1025	4	FSM	ENSG00000118680.14	ENST00000400175.9	1025	4	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	1201.4364550635	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGCAAGTTAAACAAATGAT	3262592	False	NA	38	True	AATAAA	-28	NA	3262612	3278284	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3262757_3272883_3273083_3277252_3277415_3277764
transcript_93907.known	chr18	+	614	2	FSM	ENSG00000101608.13	ENST00000585090.1	614	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAGACTCGACTTTATG	3229402	True	NA	NA	False	AATAAA	-21	NA	3247860	3249925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3247910_3249360
transcript_93908.known	chr18	+	1249	4	FSM	ENSG00000118680.14	ENST00000581193.5	1249	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1247.48342229021	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGCAAGTTAAACAAATGAT	3262396	False	NA	38	True	AATAAA	-28	NA	3262416	3278284	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3262785_3272883_3273083_3277252_3277415_3277764
transcript_93914.known	chr18	+	1585	4	FSM	ENSG00000177426.22	ENST00000407501.6	1585	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	512.255795477221	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGAATCTAGTTGGTTGA	3449860	False	NA	10	True	AATAAA	-23	NA	3449881	3458349	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3450071_3450321_3450506_3456353_3456581_3457364
transcript_93922.known	chr18	+	3030	3	FSM	ENSG00000177426.22	ENST00000618001.4	3030	3	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	583.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTATTTGTGTTTTTGAA	3447183	True	NA	NA	False	AATATA	-23	NA	3447608	3459978	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3447798_3456353_3456581_3457364
transcript_93926.known	chr18	+	801	3	FSM	ENSG00000177426.22	ENST00000549780.5	801	3	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_1	601.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCGGACCTCAACCAGGAC	3448260	False	NA	NA	False	AATACA	-35	NA	3448498	3457839	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3448598_3456353_3456581_3457364
transcript_93927.known	chr18	+	563	3	FSM	ENSG00000177426.22	ENST00000549253.5	563	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	612	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGGGGCCAAGATTTCTG	3449361	False	NA	NA	False	NA	NA	NA	3449412	3457456	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3449657_3456353_3456581_3457364
transcript_93930.known	chr18	+	1689	3	FSM	ENSG00000177426.22	ENST00000405385.7	1689	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	591	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTGTTGTAATTCAGA	3449534	False	NA	12	True	AATAAA	-12	NA	3449650	3458406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3450071_3456353_3456581_3457364
transcript_93934.known	chr18	+	3175	3	FSM	ENSG00000177426.22	ENST00000343820.10	3175	3	0	0	0	0	multi-exon	FALSE	canonical	3	921	junction_1	151.5	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTATTTGTGTTTTTGAA	3439063	True	NA	NA	False	AATATA	-23	NA	3450171	3459978	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3450506_3456353_3456581_3457364
transcript_93936.known	chr18	+	729	3	FSM	ENSG00000177426.22	ENST00000577543.5	729	3	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_2	396.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCGGGATCAGTTTTGGC	3439103	True	NA	NA	False	NA	NA	NA	3450211	3457604	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3450506_3456353_3456581_3457396
transcript_93939.known	chr18	+	1088	3	FSM	ENSG00000177426.22	ENST00000345133.9	1088	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	601.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAGAAACAAAGGGTTTT	3449594	True	NA	-80	True	TATAAA	-11	NA	3451669	3458123	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3451772_3456353_3456581_3457364
transcript_93941.known	chr18	+	1980	3	FSM	ENSG00000177426.22	ENST00000330513.10	1980	3	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	571	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGTAATTCAGAGTATT	3449601	True	NA	17	True	AATAAA	-17	NA	3451676	3458411	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3452383_3456353_3456581_3457364
transcript_93945.nnic	chr18	+	507	3	NIC	ENSG00000266835.6	novel	623	4	NA	NA	-34	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	9.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGGGTCTAGTTACCTTT	3466104	True	NA	1	True	AATAAA	-17	NA	3466215	3478976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_+_3466358_3467126_3467271_3478755
transcript_93946.known	chr18	+	450	3	FSM	ENSG00000266835.6	ENST00000581442.5	450	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	8	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTAAACTTGGCACTTAG	3466138	True	NA	-48	True	CATAAA	-35	NA	3466249	3478927	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3466358_3467126_3467297_3478755
transcript_93947.known	chr18	+	643	4	FSM	ENSG00000266835.6	ENST00000579007.5	643	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8.73053390247253	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGTCTAGTTACCTTTCC	3466185	True	NA	3	True	AATAAA	-19	NA	3466296	3478978	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3466358_3467126_3467297_3473953_3474143_3478755
transcript_93952.known	chr18	-	3525	12	FSM	ENSG00000170579.17	ENST00000581527.5	3525	12	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	5.19535711353802	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCACTGGAAGGAACTGCC	-4452629	True	NA	-9	True	ATTAAA	-20	NA	4455266	3502218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_3502646_3508569_3508662_3534193_3534616_3567489_3567582_3581874_3582249_3729134_3729376_3742334_3742513_3814058_3814274_3879111_3880141_4005115_4005202_4151179_4151288_4455005
transcript_93953.known	chr18	-	1898	7	FSM	ENSG00000170579.17	ENST00000639615.1	1898	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	10.8012344973464	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGAAGACATGACTCCTCC	NA	False	NA	NA	False	NA	NA	NA	4151290	3708463	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_3708502_3729134_3729376_3742334_3742513_3814058_3814274_3879111_3880141_4005115_4005202_4151179
transcript_9396.nic	chr1	-	1350	6	ISM	ENSG00000085840.13	ENST00000371568.8	3121	17	-88	20617	-88	-20615	5prime_fragment	FALSE	canonical	3	207	junction_1	34.7597468345211	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTGACCAGGGACATTAC	NA	False	NA	NA	False	AAAACA	-8	NA	52404511	52393445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_52393804_52396045_52396365_52397684_52397864_52401361_52401490_52402128_52402229_52404245
transcript_93962.known	chr18	-	285	2	FSM	ENSG00000170579.17	ENST00000578250.6	285	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAATTTCAAAGTAAAAGG	NA	False	NA	NA	False	ATTAAA	-34	NA	4151287	4005024	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_4005202_4151179
transcript_93963.known	chr18	+	501	4	FSM	ENSG00000177337.9	ENST00000573355.3	543	4	42	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	7.54247233265651	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTGGGGTAGCTGGTTG	3593905	True	NA	16	True	AATAAA	-27	NA	3594111	3597385	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3594241_3594419_3594485_3596578_3596676_3597175
transcript_93964.known	chr18	+	1977	3	FSM	ENSG00000177337.9	ENST00000317114.3	1979	3	2	0	2	0	multi-exon	FALSE	canonical	3	19	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATTCTGTCTC	3593896	True	NA	NA	False	NA	NA	NA	3594102	3598352	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3594241_3594419_3594485_3596578
transcript_93966.known	chr18	+	391	3	FSM	ENSG00000177337.9	ENST00000576606.6	398	3	0	7	0	0	multi-exon	FALSE	canonical	1	2	junction_2	8.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGACTCTGAGACTGTG	3593905	True	NA	3	True	AATAAA	-14	NA	3594111	3597372	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3594241_3594419_3594485_3597175
transcript_93967.nnic	chr18	+	556	3	FSM	ENSG00000262001.2	ENST00000687483.1	736	3	-6	186	-5	-186	multi-exon	FALSE	canonical	3	44	junction_2	105.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACTGGGCGTGGTGGCAC	3603905	False	NA	NA	False	AATACA	-5	NA	3603922	3609908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3604216_3606553_3606641_3609732
transcript_93969.nnic	chr18	+	613	3	FSM	ENSG00000262001.2	ENST00000692104.1	803	3	-5	195	-5	-186	multi-exon	FALSE	canonical	3	118	junction_2	68.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACTGGGCGTGGTGGCAC	3603905	False	NA	NA	False	AATACA	-5	NA	3603922	3609908	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3604216_3606553_3606698_3609732
transcript_93970.nnic	chr18	+	799	3	FSM	ENSG00000262001.2	ENST00000692104.1	803	3	-5	9	-5	0	multi-exon	FALSE	canonical	3	118	junction_2	68.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATCTCATCGCTGTTCTC	3603905	False	NA	8	True	AATAAA	-28	NA	3603922	3610094	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3604216_3606553_3606698_3609732
transcript_93972.known	chr18	+	2261	2	FSM	ENSG00000262001.2	ENST00000572856.1	2261	2	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGCTCACACTGGGGAT	3603724	True	NA	NA	False	NA	NA	NA	3603737	3608336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_3604216_3606553
transcript_93976.known	chr18	+	4075	5	FSM	ENSG00000263753.9	ENST00000577439.2	4075	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	6.36396103067893	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGACTTTCTAGTTATT	5238108	False	NA	9	True	ATTAAA	-38	NA	5238779	5246508	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_5239050_5240186_5240278_5240647_5241256_5241698_5241890_5243593
transcript_93978.known	chr18	+	837	4	FSM	ENSG00000263753.9	ENST00000653571.1	837	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7.78888096369861	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCGGGCATGGTGGAAC	5238240	False	NA	NA	False	ACTAAA	-11	NA	5238911	5243784	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_5239050_5240647_5240965_5241698_5241890_5243593
transcript_9398.known	chr1	-	539	3	FSM	ENSG00000134744.14	ENST00000524582.1	539	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	88	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAACCTTCCAGGTCCTAA	-52553333	True	NA	NA	False	AGTAAA	-5	NA	52553487	52526049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_52526374_52552930_52553091_52553432
transcript_93980.known	chr18	+	4548	4	FSM	ENSG00000263753.9	ENST00000665442.1	4548	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.816496580927726	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATAATAGGTACTCAAAAC	5237448	True	NA	-10	True	ATTAAA	-19	NA	5238119	5246489	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_5239050_5240647_5241256_5241698_5241813_5243593
transcript_93981.known	chr18	+	4669	4	FSM	ENSG00000263753.9	ENST00000656810.1	4669	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	7.31816613336672	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGGTACTCAAAACTCATG	5237409	True	NA	-5	True	ATTAAA	-24	NA	5238080	5246494	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_5239050_5240647_5241256_5241698_5241890_5243593
transcript_93984.known	chr18	-	3528	4	FSM	ENSG00000198081.11	ENST00000357006.8	3528	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	52.6898683071254	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCTTTTCATTTTTTCA	-5295298	True	NA	1	True	TATAAA	-20	NA	5296040	5289018	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_5292205_5293243_5293328_5293971_5294002_5295812
transcript_93985.known	chr18	-	825	4	FSM	ENSG00000198081.11	ENST00000582388.5	825	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	65.0589476295664	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATGGAGACCCCAGAATC	-5295686	False	742	NA	False	NA	NA	NA	5295702	5291544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_5292205_5293243_5293328_5293971_5294002_5295651
transcript_93993.known	chr18	+	4017	3	FSM	ENSG00000263753.9	ENST00000582008.6	4017	3	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_2	8	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGACTTTCTAGTTATT	5237390	True	NA	9	True	ATTAAA	-38	NA	5238061	5246508	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_5239050_5241698_5241813_5243593
transcript_93994.known	chr18	+	4461	3	FSM	ENSG00000263753.9	ENST00000657250.1	4461	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCAGTTTCAGCTACCTC	5237390	True	NA	NA	False	NA	NA	NA	5238061	5246875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_5239050_5241698_5241890_5243593
transcript_94000.known	chr18	-	1814	3	FSM	ENSG00000198081.11	ENST00000400143.7	1814	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	59	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCGGTGGGACAGGGACAC	-5296179	False	NA	NA	False	NA	NA	NA	5296195	5290857	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_5292205_5293243_5293328_5295812
transcript_94006.known	chr18	+	2363	2	FSM	ENSG00000263753.9	ENST00000655685.1	2363	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAAGAATGTGAATTCCTC	5237446	True	NA	NA	False	ACTAAA	-24	NA	5238117	5242078	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_5239050_5240647
transcript_94007.known	chr18	-	1875	1	FSM	ENSG00000264575.1	ENST00000581067.1	1875	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAATTGTTTAAAACGCG	NA	False	NA	NA	False	AATAAA	-16	NA	5238598	5236723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_5236700_5238600
transcript_94008.known	chr18	+	2034	1	FSM	ENSG00000263753.9	ENST00000581471.2	2034	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTGCCAGTTAGTATT	5237786	True	NA	NA	False	AATAAA	-19	NA	5237825	5239859	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_5237800_5239900
transcript_94009.known	chr18	+	4206	3	FSM	ENSG00000263753.9	ENST00000660030.2	4212	3	6	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	7.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAGGTACTCAAAACTCA	5237409	True	NA	-7	True	ATTAAA	-22	NA	5238080	5246492	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_5239197_5241698_5241890_5243593
transcript_94017.known	chr18	-	3370	20	FSM	ENSG00000082397.18	ENST00000540638.6	3370	20	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	26.377611593012	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTAGGTAACCTTATAT	-5544189	True	NA	NA	False	ATTAAA	-19	NA	5544281	5393092	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_5393479_5394676_5394794_5395066_5395148_5395608_5395708_5396200_5396333_5397057_5397427_5406776_5406969_5410565_5410620_5419710_5419932_5423377_5423554_5424261_5424360_5428312_5428466_5433468_5433557_5433902_5434122_5438034_5438111_5443837_5443881_5445139_5445245_5478240_5478439_5489000_5489195_5543912
transcript_94020.nic	chr18	-	3891	19	NIC	ENSG00000082397.18	novel	6962	22	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_18	22.406733996615	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGTATGTTTAATAAT	-5630496	True	NA	0	True	AATAAA	-25	NA	5630704	5392380	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_5393479_5395066_5395148_5395608_5395708_5396200_5396333_5397057_5397427_5406776_5406969_5410565_5410620_5419710_5419932_5423377_5423554_5424261_5424360_5428312_5428466_5433468_5433557_5433902_5434122_5438034_5438111_5443837_5443881_5445139_5445245_5478240_5478439_5489000_5489162_5630376
transcript_94022.nic	chr18	-	4034	19	NIC	ENSG00000082397.18	novel	4270	22	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	66	junction_6	16.1654256873836	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGTATGTTTAATAAT	-5544339	True	NA	0	True	AATAAA	-25	NA	5544350	5392380	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_5393479_5395066_5395148_5395608_5395708_5396200_5396333_5397057_5397427_5406776_5406969_5410565_5410620_5419710_5419932_5423377_5423554_5424261_5424360_5428312_5428466_5433468_5433557_5433902_5434122_5438034_5438111_5443837_5443881_5445139_5445245_5478240_5478439_5489000_5489195_5543912
transcript_94035.known	chr18	-	10638	3	FSM	ENSG00000206432.4	ENST00000581347.2	10638	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGATGTATAATTATTTAG	-5895941	False	NA	NA	False	ATTAAA	-18	NA	5895955	5882071	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_5892158_5895029_5895481_5895854
transcript_94039.known	chr18	-	867	1	FSM	ENSG00000235552.5	ENST00000489915.1	867	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1014	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTCTTAAGAACCTAATTA	-6461073	True	NA	NA	False	NA	NA	NA	6463010	6462143	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_6462100_6463000
transcript_94041.known	chr18	+	5858	18	FSM	ENSG00000088756.13	ENST00000383472.9	5858	18	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	8.21931222339227	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTATGAGAATTCTTCT	6728615	True	NA	NA	False	AATAAA	-18	NA	6729715	6915716	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_6729944_6824761_6824965_6837196_6837415_6851033_6851127_6859807_6859898_6868149_6868235_6870589_6870733_6873408_6873575_6873683_6873776_6876130_6876209_6882136_6882300_6887156_6887240_6889887_6890086_6890429_6890544_6894834_6894892_6896501_6896627_6908959_6909025_6912059
transcript_94043.nic	chr18	+	2554	17	NIC	ENSG00000088756.13	novel	5858	18	NA	NA	-134	0	combination_of_known_junctions	TRUE	canonical	3	13	junction_16	15.1439705411098	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGACTGCAGAGAGACTCA	6729524	False	NA	6	True	AATAAA	-15	NA	6729581	6898719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_+_6729944_6824761_6824965_6837196_6837415_6851033_6851127_6859807_6859898_6868149_6868235_6870589_6870733_6873408_6873575_6873683_6873776_6876130_6876209_6882136_6882300_6887156_6887240_6889887_6890086_6890429_6890544_6894834_6894892_6896501_6896627_6898435
transcript_94046.known	chr18	-	491	2	FSM	ENSG00000266441.1	ENST00000577327.1	491	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATCACATTAACAGATACC	-6729834	False	104	NA	False	NA	NA	NA	6729862	6728820	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_6729169_6729719
transcript_9405.known	chr1	+	5233	10	FSM	ENSG00000134748.13	ENST00000257181.10	5233	10	0	0	0	0	multi-exon	TRUE	canonical	3	311	junction_3	38.6957106756209	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTTGTTGGGAGTTAAAA	52399140	True	NA	NA	False	AATAAA	-26	NA	52404601	52420836	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_52404880_52405679_52405840_52408568_52408691_52411114_52411201_52412513_52412625_52413878_52413992_52414620_52414648_52414761_52414860_52415337_52415387_52416647
transcript_94052.nic	chr18	-	1170	8	ISM	ENSG00000101680.16	ENST00000579014.5	10374	62	-100	101403	-62	-4779	5prime_fragment	FALSE	canonical	3	99	junction_2	17.3980998258724	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAGAAGAAAAGTTTGAATA	-7111176	True	NA	NA	False	AATAAA	-36	NA	7117859	7043350	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_7043406_7044721_7044840_7046277_7046368_7049077_7049258_7050693_7050937_7079974_7080088_7080286_7080458_7117659
transcript_94055.known	chr18	+	6095	31	FSM	ENSG00000173482.17	ENST00000332175.12	6095	31	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_7	6.4546279693118	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGACAATCATTTTTC	NA	False	NA	11	True	ATTAAA	-21	NA	7566781	8406861	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_7567892_7774148_7774272_7888105_7888378_7906504_7906584_7926567_7926684_7949180_7949356_7955120_7955415_8069685_8069995_8076454_8076565_8085670_8085873_8088748_8088852_8113485_8113760_8114790_8114828_8143646_8143780_8244057_8244210_8247844_8247920_8253226_8253415_8296367_8296456_8314780_8314858_8319177_8319215_8343422_8343521_8370889_8371007_8376045_8376201_8376461_8376598_8378264_8378415_8379166_8379341_8380295_8380428_8384560_8384687_8387071_8387236_8394475_8394612_8406108
transcript_94060.known	chr18	+	2856	1	FSM	ENSG00000168502.17	ENST00000581670.1	2856	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGTCTCGGTCTCTCATT	8829906	False	NA	19	True	AATAAA	-18	NA	8829922	8832778	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_8829900_8832800
transcript_94062.known	chr18	+	1338	9	FSM	ENSG00000101745.17	ENST00000540578.6	1338	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_8	39.5725204529608	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCATCAGACTTTAATGG	9128502	True	NA	NA	False	AATAAA	-13	NA	9136804	9235820	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_9136966_9182381_9182520_9195550_9195699_9204475_9204545_9208656_9208804_9211583_9211785_9216757_9216901_9221851_9222000_9235637
transcript_94063.nic	chr18	+	2323	9	ISM	ENSG00000101745.17	ENST00000262126.9	11284	13	-612	31243	-59	469	5prime_fragment	FALSE	canonical	3	29	junction_3	31.2307440673449	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGGAAAAGAAAATACAA	9136117	True	NA	51	True	AATAAA	-33	NA	9136168	9254742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_9136966_9182381_9182520_9195550_9195699_9204475_9204545_9208656_9208804_9211583_9211785_9216757_9216901_9221851_9222000_9254210
transcript_94064.nic	chr18	+	2202	9	ISM	ENSG00000101745.17	ENST00000262126.9	11284	13	-10	30762	-10	-888	5prime_fragment	FALSE	canonical	3	29	junction_3	31.2307440673449	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATAAATTGAAGCATAAAGA	9128468	True	NA	NA	False	ATTAAA	-5	NA	9136770	9255223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_9136966_9182381_9182520_9195550_9195699_9204475_9204545_9208656_9208804_9211583_9211785_9216757_9216901_9221851_9222000_9254210
transcript_94068.nic	chr18	+	2027	8	NIC	ENSG00000101745.17	novel	11284	13	NA	NA	168	469	combination_of_known_junctions	FALSE	canonical	3	74	junction_3	15.0319387862467	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGGAAAAGAAAATACAA	9136384	False	NA	51	True	AATAAA	-33	NA	9136395	9254742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_+_9136966_9182381_9182520_9195550_9195699_9208656_9208804_9211583_9211785_9216757_9216901_9221851_9222000_9254210
transcript_94069.nic	chr18	+	2267	8	NIC	ENSG00000101745.17	novel	11284	13	NA	NA	-144	-888	combination_of_known_junctions	FALSE	canonical	3	74	junction_3	15.0319387862467	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATAAATTGAAGCATAAAGA	9136625	False	NA	NA	False	ATTAAA	-5	NA	9136636	9255223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_+_9136966_9182381_9182520_9195550_9195699_9208656_9208804_9211583_9211785_9216757_9216901_9221851_9222000_9254210
transcript_94071.nic	chr18	+	1771	8	NIC	ENSG00000101745.17	novel	11284	13	NA	NA	2	469	combination_of_known_junctions	FALSE	canonical	1	7	junction_1	32.0866174659805	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGGAAAAGAAAATACAA	9128480	True	NA	51	True	AATAAA	-33	NA	9136782	9254742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_+_9137097_9182381_9182520_9195550_9195699_9208656_9208804_9211583_9211785_9216757_9216901_9221851_9222000_9254210
transcript_94078.nic	chr18	+	654	5	NIC	ENSG00000101745.17	novel	1338	9	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_3	17.2100987794957	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAGAAAACTCCCAGTTC	9128480	True	NA	NA	False	NA	NA	NA	9136782	9211621	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_+_9136966_9182381_9182520_9195550_9195699_9208656_9208804_9211583
transcript_94079.nic	chr18	+	357	3	ISM	ENSG00000101745.17	ENST00000581635.5	631	5	-45	13146	-2	0	5prime_fragment	FALSE	canonical	3	112	junction_2	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGATGTGAGCAAGGAGA	9128491	True	NA	NA	False	AGTAAA	-42	NA	9136793	9195597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_9136966_9182381_9182520_9195550
transcript_94085.known	chr18	+	857	8	FSM	ENSG00000178127.13	ENST00000318388.11	857	8	0	0	0	0	multi-exon	FALSE	canonical	3	3359	junction_2	229.953056433841	1029	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATTTGTTTATTCTGCTC	9082309	True	NA	28	True	AATAAA	-25	NA	9102698	9134341	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_9102798_9117837_9117904_9119325_9119389_9119473_9119591_9122512_9122682_9124873_9124984_9126830_9126908_9134185
transcript_9409.known	chr1	+	1059	8	FSM	ENSG00000134748.13	ENST00000474048.1	1059	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	132.545102065797	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGCTGTAGTTTAGTTTTT	52399166	True	NA	28	True	ATTAAA	-22	NA	52404627	52417022	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_52404880_52405679_52405714_52412513_52412625_52413878_52413992_52414620_52414648_52414761_52414860_52415337_52415387_52416647
transcript_94090.known	chr18	+	2311	7	FSM	ENSG00000128791.12	ENST00000583147.5	2311	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	122.206110049102	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAATCTCAATCTTAAA	9330625	True	NA	9	True	AATAAA	-39	NA	9334766	9400817	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_9334921_9337192_9337353_9359971_9360072_9388039_9388141_9388363_9388421_9396279_9396547_9399345
transcript_94093.known	chr18	+	3750	5	FSM	ENSG00000128791.12	ENST00000262120.10	3750	5	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_4	10.3531396204243	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTCATATTTTTTGTTA	9330631	True	NA	10	True	AATAAA	-13	NA	9334772	9402420	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_9334921_9337192_9337353_9359971_9360072_9396279_9396547_9399345
transcript_94096.known	chr18	+	4368	10	FSM	ENSG00000017797.13	ENST00000019317.8	4368	10	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_1	145.072225519856	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGACTTCTCTGTTTTG	9474795	True	NA	17	True	ATTAAA	-28	NA	9475008	9538114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_9475177_9512990_9513290_9516844_9517304_9522159_9522510_9524593_9524756_9525719_9525852_9530833_9530942_9533334_9533457_9533702_9533827_9535670
transcript_94097.known	chr18	+	4379	10	FSM	ENSG00000017797.13	ENST00000383432.8	4379	10	0	0	0	0	multi-exon	FALSE	canonical	3	437	junction_1	32.1527987760911	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGACTTCTCTGTTTTG	9471307	True	NA	17	True	ATTAAA	-28	NA	9475512	9538114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_9475692_9512990_9513290_9516844_9517304_9522159_9522510_9524593_9524756_9525719_9525852_9530833_9530942_9533334_9533457_9533702_9533827_9535670
transcript_94103.known	chr18	+	3676	3	FSM	ENSG00000017797.13	ENST00000609094.2	3676	3	0	0	0	0	multi-exon	FALSE	canonical	3	437	junction_1	51	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTTATTTTTGTGTTTT	9475544	False	NA	NA	False	AATAAA	-17	NA	9475669	9520199	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_9475692_9512990_9513290_9516844
transcript_94106.known	chr18	+	836	3	FSM	ENSG00000017797.13	ENST00000458039.3	836	3	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_1	257.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGCCAGCCGTTTTCCG	9476079	False	NA	NA	False	NA	NA	NA	9476126	9517221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_9476287_9512990_9513290_9516844
transcript_94109.nic	chr18	+	509	2	ISM	ENSG00000017797.13	ENST00000609094.2	3676	3	-216	6938	0	205	5prime_fragment	FALSE	canonical	3	437	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGGAAATTTAAGAAAAAGGA	9475240	False	NA	0	True	AAGAAA	-4	NA	9475453	9513261	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_9475692_9512990
transcript_94121.known	chr18	-	3923	20	FSM	ENSG00000154845.16	ENST00000400556.8	3923	20	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_18	31.2511938830115	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATTAGTTTCTCTGGAA	-9613396	True	NA	-18	True	ATTAAA	-19	NA	9614559	9546793	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_9547953_9549196_9549339_9550051_9550187_9550277_9550399_9553321_9553423_9557220_9557383_9559418_9559605_9561979_9562076_9563377_9563551_9570156_9570684_9577063_9577192_9583116_9583276_9584514_9584581_9584720_9584829_9588088_9588236_9588710_9588854_9593767_9593875_9595017_9595154_9614225_9614271_9614477
transcript_94122.known	chr18	-	3885	20	FSM	ENSG00000154845.16	ENST00000400555.7	3885	20	0	0	0	0	multi-exon	TRUE	canonical	3	109	junction_18	25.6150925040086	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAGTTTCTCTGGAATCT	-9613406	True	NA	-15	True	ATTAAA	-22	NA	9614569	9546790	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_9547953_9549196_9549339_9550051_9550187_9550277_9550399_9553321_9553423_9557220_9557383_9559418_9559605_9561979_9562076_9563377_9563551_9570156_9570684_9577063_9577192_9583116_9583276_9584514_9584581_9584720_9584829_9588088_9588236_9588710_9588854_9593767_9593875_9595017_9595103_9614225_9614271_9614477
transcript_94125.known	chr18	+	3919	7	FSM	ENSG00000168461.13	ENST00000578921.6	3919	7	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_6	31.6842056692114	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTTGTCTTTTTCTTATT	9706793	True	NA	18	True	AATAAA	-15	NA	9708300	9862551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_9708445_9775277_9775358_9792153_9792236_9814019_9814092_9815115_9815223_9845581_9845692_9859227
transcript_9413.known	chr1	+	926	3	FSM	ENSG00000134748.13	ENST00000487160.1	926	3	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_2	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTCCTCTAACACTGTA	52399158	True	NA	NA	False	NA	NA	NA	52404619	52409074	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_52404880_52405679_52405840_52408568
transcript_94130.known	chr18	+	783	6	FSM	ENSG00000168461.13	ENST00000578734.5	783	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	124.619420637395	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGGCAGGAAATGTACCTG	9706767	True	NA	NA	False	NA	NA	NA	9708274	9859469	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_9708445_9792153_9792236_9814019_9814092_9815115_9815223_9845581_9845692_9859227
transcript_94132.known	chr18	+	469	5	FSM	ENSG00000168461.13	ENST00000581109.1	469	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	139.252244147087	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAGCCAACCATGCAAGC	9706799	True	NA	NA	False	NA	NA	NA	9708306	9859286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_9708445_9775277_9775358_9792153_9792236_9845581_9845692_9859227
transcript_94136.known	chr18	+	1227	7	FSM	ENSG00000101558.14	ENST00000340541.4	1227	7	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_4	629.02907987893	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTACGGTTAGAAAACACAA	9891092	True	NA	NA	False	NA	NA	NA	9914061	9954358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_9914336_9931809_9931963_9936109_9936214_9936985_9937067_9944923_9945059_9950394_9950569_9954052
transcript_94142.known	chr18	+	6801	6	FSM	ENSG00000101558.14	ENST00000400000.7	6801	6	0	0	0	0	multi-exon	FALSE	canonical	3	1350	junction_1	85.6434469180217	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTGGGTGCTTTTGTG	9891046	True	NA	NA	False	AATAAA	-14	NA	9914015	9960021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_9914336_9931809_9931963_9936109_9936214_9936985_9937067_9950394_9950569_9954052
transcript_94150.known	chr18	+	917	3	FSM	ENSG00000101558.14	ENST00000577901.5	917	3	0	0	0	0	multi-exon	FALSE	canonical	3	1350	junction_1	88.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAAATGAGCTGGGTAT	9891082	True	NA	NA	False	AAAACA	-38	NA	9914051	9936589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_9914336_9931809_9931963_9936109
transcript_94154.nnic	chr18	+	2491	6	NNC	ENSG00000154856.13	novel	3803	5	NA	NA	-58	805	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	13.4253491574707	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTACATCATTTGTCTTA	10454545	False	NA	16	True	ATTAAA	-22	NA	10454576	10488701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr18_+_10454751_10454872_10455040_10468468_10468653_10471529_10472062_10485461_10485784_10487589
transcript_94155.nnic	chr18	+	2459	6	NNC	ENSG00000154856.13	novel	3803	5	NA	NA	-36	805	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	13.4253491574707	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTACATCATTTGTCTTA	10454406	True	NA	16	True	ATTAAA	-22	NA	10454598	10488701	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr18_+_10454751_10454882_10455040_10468468_10468653_10471529_10472062_10485461_10485784_10487589
transcript_94158.known	chr18	+	3559	12	FSM	ENSG00000134265.13	ENST00000322897.11	3559	12	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_2	18.1121392103986	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATTGTTCTTTGTATTA	10523397	True	NA	9	True	AATAAA	-18	NA	10526026	10552764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_10526159_10530769_10530838_10532710_10532796_10533535_10533554_10534465_10534497_10539761_10539872_10539987_10540055_10540328_10540400_10546325_10546405_10548298_10548379_10548966_10549097_10550076
transcript_9416.known	chr1	+	1229	3	FSM	ENSG00000116157.6	ENST00000361314.5	1229	3	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	21.5	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCATAGTCTCCCTCCC	52601217	True	NA	12	True	AATAAA	-20	NA	52602370	52609051	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_52602548_52606683_52606946_52608261
transcript_94162.nic	chr18	+	625	9	ISM	ENSG00000134265.13	ENST00000322897.11	3559	12	-4	6400	-4	-4156	5prime_fragment	FALSE	canonical	3	223	junction_2	20.4048860570208	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTATAAGGAAATTGAGA	10525977	False	NA	NA	False	AAGAAA	-5	NA	10526022	10546364	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_10526159_10530769_10530838_10532710_10532796_10533535_10533554_10534465_10534497_10539761_10539872_10539987_10540055_10540328_10540400_10546325
transcript_94164.known	chr18	+	887	8	FSM	ENSG00000134265.13	ENST00000582978.5	887	8	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_2	19.3601737216021	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTTGACAAATAGTGTCA	10523472	False	NA	NA	False	CATAAA	-24	NA	10526101	10540779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_10526159_10530769_10530838_10532710_10532796_10533535_10533554_10534465_10534497_10539761_10539872_10539987_10540055_10540328
transcript_94165.known	chr18	+	1516	8	FSM	ENSG00000134265.13	ENST00000580483.5	1516	8	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_1	82.6161520008562	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATTATGAGTTTGAAAAA	10525682	True	NA	4	True	AATAAA	-20	NA	10525904	10550801	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_10526159_10539761_10539872_10539987_10540055_10540328_10540400_10546325_10546405_10548298_10548379_10548966_10549097_10550076
transcript_94171.nic	chr18	-	1626	3	ISM	ENSG00000154864.14	ENST00000686869.1	7093	38	-946	266146	-22	-14	5prime_fragment	FALSE	canonical	3	58	junction_1	5.5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTACAATTTCTAACATGAT	-11148369	True	NA	NA	False	AGTAAA	-11	NA	11149591	10979197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_10979661_11066126_11066223_11148524
transcript_94176.nnic	chr18	+	4711	13	NNC	ENSG00000141404.17	novel	6227	12	NA	NA	-49	0	intron_retention	FALSE	canonical	0	0	junction_12	32.1998964801649	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGTTGTTTCTGTTCCT	11688551	True	NA	28	True	AATAAA	-23	NA	11689214	11885685	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr18_+_11689940_11752852_11752926_11753627_11753683_11753825_11753946_11824917_11825016_11862394_11862450_11864532_11864607_11867167_11867227_11868542_11868664_11872267_11872399_11876620_11876689_11880988_11882404_11883968
transcript_94177.known	chr18	+	1722	13	FSM	ENSG00000141404.17	ENST00000269162.9	1722	13	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	32.1674222709181	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCTCCCTTTATTGATTC	NA	False	NA	NA	False	NA	NA	NA	11751507	11881410	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_11751707_11752331_11752579_11752852_11752926_11753627_11753683_11753825_11753946_11824917_11825016_11862394_11862450_11864532_11864607_11867167_11867227_11868542_11868664_11872267_11872399_11876620_11876689_11880988
transcript_94181.known	chr18	+	6227	12	FSM	ENSG00000141404.17	ENST00000334049.11	6227	12	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	17.078815837558	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGTTGTTTCTGTTCCT	11688600	True	NA	28	True	AATAAA	-23	NA	11689263	11885685	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_11689940_11752852_11752926_11753627_11753683_11753825_11753946_11824917_11825016_11862394_11862450_11864532_11864607_11867167_11867227_11868542_11868664_11872267_11872399_11876620_11876689_11880988
transcript_94184.known	chr18	+	6045	12	FSM	ENSG00000141404.17	ENST00000423027.8	6045	12	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	21.4618631588204	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGTTGTTTCTGTTCCT	11751996	True	NA	28	True	AATAAA	-23	NA	11752084	11885685	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_11752579_11752852_11752926_11753627_11753683_11753825_11753946_11824917_11825016_11862394_11862450_11864532_11864607_11867167_11867227_11868542_11868664_11872267_11872399_11876620_11876689_11880988
transcript_94188.known	chr18	+	1038	8	FSM	ENSG00000141404.17	ENST00000602628.1	1038	8	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	33.1607094776518	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGCCTGACTGCCAGCCC	11857387	True	NA	NA	False	NA	NA	NA	11857439	11881172	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_11857786_11862394_11862450_11864532_11864607_11867167_11867227_11868542_11868664_11872267_11872399_11876620_11876689_11880988
transcript_94194.known	chr18	+	3032	1	FSM	ENSG00000255112.3	ENST00000526991.3	3032	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTGGATGTGAGTGTG	11848858	True	NA	9	True	ATTAAA	-16	NA	11851412	11854444	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_11851400_11854400
transcript_94196.known	chr18	-	2427	12	FSM	ENSG00000154889.17	ENST00000496196.5	2427	12	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	21.0473688506946	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAGATGTGATGTGCAGA	-11906740	True	NA	NA	False	AATATA	-16	NA	11908317	11883689	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_11884628_11884878_11885044_11885675_11885817_11886498_11886622_11886712_11886779_11886916_11887026_11888668_11888744_11889386_11889491_11893467_11893577_11896983_11897357_11906202_11906310_11908200
transcript_9420.known	chr1	-	908	3	FSM	ENSG00000162377.6	ENST00000486918.1	908	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	149	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTATAGCCTACAATGTTT	-52693587	False	NA	-96	True	NA	NA	NA	52698068	52687561	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_52688169_52692726_52692868_52697908
transcript_94203.known	chr18	-	3330	11	FSM	ENSG00000154889.17	ENST00000588072.6	3330	11	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_4	15.8496056733283	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCACCTCCCAGGTTCAAG	-11906740	True	NA	NA	False	NA	NA	NA	11908317	11882621	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_11884628_11885675_11885817_11886498_11886622_11886712_11886779_11886916_11887026_11888668_11888744_11889386_11889491_11893467_11893577_11896983_11897357_11906202_11906310_11908200
transcript_9421.known	chr1	-	3988	3	FSM	ENSG00000162377.6	ENST00000371538.5	3988	3	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_1	13.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATTGCCTCATATCCCA	-52693866	True	NA	-14	True	ATTAAA	-8	NA	52698347	52684448	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_52688169_52692726_52692868_52698220
transcript_94214.known	chr18	-	1831	10	FSM	ENSG00000154889.17	ENST00000344987.11	1831	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	23.4178364015209	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGTTTCCCTCTTCCTGT	-11906753	True	NA	-22	True	AATAAA	-6	NA	11908330	11884067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_11884628_11885675_11885817_11886498_11886622_11886916_11887026_11888668_11888744_11889386_11889491_11893467_11893577_11896983_11897357_11906202_11906310_11908200
transcript_94224.known	chr18	-	1636	8	FSM	ENSG00000154889.17	ENST00000309976.13	1636	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	33.4383380116236	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTGAAGTGGTTCTCAAA	-11906773	True	NA	-7	True	AATAAA	-21	NA	11908350	11884052	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_11884628_11885675_11885817_11886916_11887026_11888668_11888744_11889386_11889491_11893467_11893577_11896983_11897357_11908200
transcript_94227.known	chr18	-	379	3	FSM	ENSG00000154889.17	ENST00000593001.5	379	3	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	9.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGTTGTCTTTGCTGTG	-11906724	True	NA	NA	False	ATTAAA	-30	NA	11908301	11897185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_11897357_11906202_11906310_11908200
transcript_94231.known	chr18	+	923	8	FSM	ENSG00000141401.12	ENST00000589238.5	923	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	285.888589688861	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGGCCCTCGTGGCCCAC	11980787	False	NA	NA	False	NA	NA	NA	11981036	12030516	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_11981131_11999053_11999188_12009882_12009988_12012169_12012216_12014264_12014374_12028042_12028152_12028841_12028994_12030342
transcript_94237.known	chr18	+	1449	8	FSM	ENSG00000141401.12	ENST00000269159.8	1449	8	0	0	0	0	multi-exon	FALSE	canonical	3	726	junction_4	54.8020556742395	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTATCTGTTTCCT	11974226	True	NA	23	True	AATAAA	-14	NA	11981506	12030877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_11981766_11999053_11999188_12009882_12009988_12012169_12012216_12014264_12014374_12028042_12028152_12028841_12028994_12030342
transcript_94240.known	chr18	+	1616	8	FSM	ENSG00000141401.12	ENST00000590107.5	1616	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	295.690820325031	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATGGCCCTGTGTGTAT	11974184	True	NA	14	True	AATAAA	-5	NA	11981464	12030868	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_11981766_11999053_11999188_12009882_12009988_12012169_12012350_12014264_12014374_12028042_12028152_12028841_12028994_12030342
transcript_94246.nic	chr18	+	2223	7	NIC	ENSG00000141401.12	novel	1449	8	NA	NA	-5	0	intron_retention	FALSE	canonical	3	726	junction_4	49.9179882963602	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTATCTGTTTCCT	11981395	True	NA	23	True	AATAAA	-14	NA	11981422	12030877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_+_11981766_11999053_11999188_12009882_12009988_12012169_12012216_12014264_12014374_12028042_12028994_12030342
transcript_94248.known	chr18	+	895	7	FSM	ENSG00000141401.12	ENST00000590138.1	895	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	311.54280069786	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTCCCAAGGCCTCCC	11974330	False	NA	NA	False	NA	NA	NA	11981610	12030473	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_11981766_11999053_11999188_12009882_12009988_12014264_12014374_12028042_12028152_12028841_12028994_12030342
transcript_94255.known	chr18	+	1008	5	FSM	ENSG00000176194.18	ENST00000320477.10	1008	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.433012701892219	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTGACACTTCCTGTG	12254326	True	NA	NA	False	AATAAA	-24	NA	12254360	12277595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_12254422_12262824_12262970_12264306_12264454_12274092_12274275_12277122
transcript_94256.known	chr18	+	733	2	FSM	ENSG00000267069.2	ENST00000586226.2	884	2	45	106	45	-106	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCTATTTTCTTCTCAC	12288258	True	NA	NA	False	NA	NA	NA	12288307	12291488	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_12288655_12291102
transcript_94260.known	chr18	-	3160	17	FSM	ENSG00000141385.12	ENST00000269143.8	3160	17	0	0	0	0	multi-exon	TRUE	canonical	3	621	junction_15	63.1699097672302	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGGGTCCCTATTTATGC	-12363110	True	NA	-1	True	AATAAA	-29	NA	12377227	12328943	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_12329784_12337340_12337536_12340200_12340402_12344131_12344248_12348272_12348384_12351084_12351211_12351305_12351414_12353004_12353159_12356693_12356832_12358669_12358944_12359926_12360052_12363781_12363857_12366964_12367118_12367275_12367383_12370848_12370927_12371591_12371692_12376968
transcript_94295.known	chr18	+	524	5	FSM	ENSG00000176014.13	ENST00000590693.5	524	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	459.135600884967	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTCCAGCTCACGCACT	12307637	False	NA	NA	False	NA	NA	NA	12307668	12325181	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_12307770_12308261_12308350_12308686_12308796_12310942_12311054_12325066
transcript_94300.known	chr18	+	576	5	FSM	ENSG00000176014.13	ENST00000590388.5	576	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	551.72955331394	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCGCTGGGCGGCGGCAC	12289073	True	NA	NA	False	NA	NA	NA	12308240	12325197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_12308350_12308686_12308796_12310942_12311054_12320628_12320745_12325066
transcript_94301.known	chr18	+	788	4	FSM	ENSG00000176014.13	ENST00000586653.5	788	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	506.386106532248	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGACCGCATCATGAACACC	12289073	True	NA	NA	False	NA	NA	NA	12308240	12325267	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_12308350_12308686_12308796_12310942_12311054_12324808
transcript_94302.known	chr18	+	481	4	FSM	ENSG00000176014.13	ENST00000592683.5	481	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	520.519185258548	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGACGCAGTGCTGGACG	12289079	True	NA	NA	False	NA	NA	NA	12308246	12325124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_12308350_12308686_12308796_12310942_12311054_12324966
transcript_94303.known	chr18	+	1879	4	FSM	ENSG00000176014.13	ENST00000317702.10	1879	4	0	0	0	0	multi-exon	FALSE	canonical	3	937	junction_3	80.6101730552664	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGCTACTTGGGTCACT	12289073	True	NA	34	True	CATAAA	-26	NA	12308240	12326616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_12308350_12308686_12308796_12310942_12311054_12325066
transcript_94304.known	chr18	+	1017	4	FSM	ENSG00000176014.13	ENST00000591909.5	1017	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_3	488.01388869125	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTATTCAGAAATATTAAT	12289066	True	NA	22	True	ATTAAA	-18	NA	12308233	12329826	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_12308350_12308686_12308796_12310942_12311054_12329145
transcript_9431.known	chr1	+	8143	14	FSM	ENSG00000162378.13	ENST00000294353.7	8143	14	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_11	12.9107083667994	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAAGTGTGTCTTGTCTA	52723658	True	NA	6	True	AATAAA	-15	NA	52726452	52827336	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_52726684_52756457_52756624_52771019_52771775_52779852_52779994_52784876_52785054_52790002_52790068_52796291_52796392_52796733_52796785_52801818_52801981_52802091_52802140_52813535_52813734_52813859_52813913_52816531_52816630_52821438
transcript_94310.known	chr18	+	408	3	FSM	ENSG00000176014.13	ENST00000587204.1	408	3	0	0	0	0	multi-exon	FALSE	canonical	3	1081	junction_2	22.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTCATAGAAAAAGTGTGA	12289076	True	NA	NA	False	TTTAAA	-35	NA	12308243	12311135	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_12308350_12308686_12308796_12310942
transcript_94312.known	chr18	+	1075	3	FSM	ENSG00000176014.13	ENST00000590103.5	1075	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	538	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGTTCAAGCGCATCTC	12289064	True	NA	NA	False	NA	NA	NA	12308231	12325914	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_12308350_12308686_12308796_12325066
transcript_94314.known	chr18	+	485	3	FSM	ENSG00000176014.13	ENST00000591463.1	485	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	467.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCACCAGCTGGTGGAGAA	12289095	True	NA	NA	False	NA	NA	NA	12308262	12325353	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_12308350_12310942_12311054_12325066
transcript_94315.nic	chr18	-	521	3	ISM	ENSG00000141385.12	ENST00000269143.8	3160	17	-121	41942	-121	-12081	5prime_fragment	FALSE	canonical	3	621	junction_1	75.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTAGTGAACCTAAAGAAGT	NA	False	NA	NA	False	NA	NA	NA	12377348	12370885	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_12370927_12371591_12371692_12376968
transcript_94318.known	chr18	+	2163	3	FSM	ENSG00000176014.13	ENST00000417736.2	2163	3	0	0	0	0	multi-exon	FALSE	canonical	3	937	junction_2	72	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCATCTCTCTAGCCATG	12289073	True	NA	8	True	AATAAA	-15	NA	12308240	12326563	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_12308796_12310942_12311054_12325066
transcript_94326.known	chr18	+	1684	7	FSM	ENSG00000141391.14	ENST00000440960.6	1684	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	9.04924797366549	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAACCGTTTCGTGTCTGTC	12407615	True	NA	NA	False	ATTAAA	-22	NA	12407928	12432234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_12408008_12420324_12420494_12421539_12421630_12427040_12427112_12427220_12427324_12429349_12429437_12431149
transcript_94327.nic	chr18	+	1835	7	NIC	ENSG00000141391.14	novel	2001	6	NA	NA	-170	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	8.44590630621328	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTTTCGTGTCTGTCTTTT	NA	False	NA	NA	False	ATTAAA	-26	NA	12419721	12432238	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_+_12419948_12420324_12420494_12421539_12421630_12427040_12427112_12427220_12427324_12429349_12429437_12431149
transcript_94331.known	chr18	+	777	6	FSM	ENSG00000141391.14	ENST00000590956.5	777	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	9.41488183675185	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCCGCCCCCGCCCGCCCG	12407582	True	NA	NA	False	NA	NA	NA	12407895	12431463	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_12408008_12421539_12421630_12427040_12427112_12427220_12427324_12429349_12429437_12431149
transcript_94335.known	chr18	+	1694	5	FSM	ENSG00000141391.14	ENST00000587735.1	1694	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	6.05702071979286	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTTTCGTGTCTGTCTTTT	12421262	True	NA	NA	False	ATTAAA	-26	NA	12421285	12432238	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_12421630_12427040_12427112_12427220_12427324_12429349_12429437_12431149
transcript_94336.known	chr18	+	2001	6	FSM	ENSG00000141391.14	ENST00000592149.5	2001	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	5.62138772902208	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTTTCGTGTCTGTCTTTT	NA	False	NA	NA	False	ATTAAA	-26	NA	12419932	12432238	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_12420494_12421539_12421630_12427040_12427112_12427220_12427324_12429349_12429437_12431149
transcript_94338.known	chr18	-	5533	16	FSM	ENSG00000134278.16	ENST00000410092.7	5533	16	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_5	11.7215850274421	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCTGTGTTGAGTTGCT	-12657029	True	NA	-2	True	AATAAA	-16	NA	12658045	12446512	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_12449897_12452254_12452392_12452484_12452513_12453067_12453139_12454345_12454484_12463350_12463494_12464867_12464959_12479698_12479872_12493071_12493202_12496015_12496103_12506476_12506642_12512453_12512532_12535475_12535602_12546673_12546905_12635061_12635097_12657529
transcript_94342.known	chr18	-	2895	12	FSM	ENSG00000101624.11	ENST00000262127.7	2895	12	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	13.2121907143015	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGTGGTCAGAGGATT	-12700816	True	NA	NA	False	GATAAA	-26	NA	12702723	12672624	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_12673504_12674535_12674754_12678108_12678443_12680661_12680829_12686261_12686451_12691358_12691488_12695253_12695352_12697222_12697409_12698978_12699204_12699829_12699906_12700957_12701114_12702485
transcript_94348.known	chr18	+	1070	7	FSM	ENSG00000128789.21	ENST00000317615.11	1070	7	0	0	0	0	multi-exon	FALSE	canonical	3	559	junction_5	20.0866179886566	407	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTCTTAAATGTATTTT	12692827	True	NA	18	True	AATAAA	-19	NA	12703041	12725740	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_12703165_12706549_12706722_12712701_12712761_12718516_12718636_12720509_12720684_12724498_12724620_12725438
transcript_94353.known	chr18	-	897	4	FSM	ENSG00000101624.11	ENST00000586887.1	897	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	42.8200368467328	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTGGATATTATTTTTT	-12700870	True	NA	NA	False	TTTAAA	-42	NA	12702777	12698792	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_12699166_12699829_12699906_12700957_12701114_12702485
transcript_94357.known	chr18	-	1648	11	FSM	ENSG00000175354.20	ENST00000591115.5	1648	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	153.652725325651	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTTGTTGGTTTGTGTG	-12881081	True	NA	-4	True	ATTAAA	-16	NA	12884214	12785480	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_12785845_12794383_12794486_12801969_12802152_12814202_12814356_12817155_12817366_12819213_12819283_12825809_12825945_12830942_12831042_12836790_12836892_12859163_12859255_12884072
transcript_94360.known	chr18	-	1706	10	FSM	ENSG00000175354.20	ENST00000327283.7	1706	10	0	0	0	0	multi-exon	TRUE	canonical	3	252	junction_5	56.5340496111158	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTGGTTTGTGTGCAT	-12881205	False	NA	-1	True	ATTAAA	-19	NA	12884338	12785477	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_12785845_12794383_12794486_12801969_12802152_12814202_12814356_12817155_12817366_12825809_12825945_12830942_12831042_12836790_12836892_12859163_12859255_12884072
transcript_94367.known	chr18	-	3470	9	FSM	ENSG00000175354.20	ENST00000309660.10	3470	9	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_4	52.9362824535309	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTGTGTCCTGATTCA	-12881104	True	NA	-2	True	ATTAAA	-17	NA	12884237	12792151	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_12794486_12801969_12802152_12814202_12814356_12817155_12817366_12825809_12825945_12830942_12831042_12836790_12836892_12859163_12859255_12884072
transcript_9437.known	chr1	-	455	1	FSM	ENSG00000228929.1	ENST00000437890.1	455	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTCTGTGTACTCAAGC	-52772632	False	NA	NA	False	NA	NA	NA	52772648	52772193	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_52772200_52772600
transcript_94384.known	chr18	+	3494	9	FSM	ENSG00000085415.16	ENST00000262124.15	3494	9	0	0	0	0	multi-exon	FALSE	canonical	3	750	junction_3	43.0985426087704	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGACTTTTTGGTCTTTT	12937468	True	NA	21	True	AATAAA	-32	NA	12947994	12987536	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_12948233_12951854_12951906_12955462_12955610_12963159_12963372_12971152_12971252_12978751_12978893_12982517_12982676_12984039_12984191_12985239
transcript_94391.known	chr18	+	1851	9	FSM	ENSG00000085415.16	ENST00000399892.7	1851	9	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_8	264.931565456063	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAATGTGGACTTTTTGGT	12937484	True	NA	16	True	AATAAA	-27	NA	12948010	12987531	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_12948233_12951854_12951906_12955462_12955610_12963159_12963372_12971152_12971252_12978751_12978893_12982517_12982676_12984039_12984191_12986861
transcript_94397.nic	chr18	+	1186	9	ISM	ENSG00000101639.19	ENST00000589596.5	3793	18	-87	40139	-87	10544	5prime_fragment	FALSE	canonical	3	33	junction_7	5.80409338312195	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAGGGTATTGTTCCAG	12989029	True	NA	NA	False	AATAGA	-4	NA	12991274	13019175	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_12991438_12999420_12999589_13001456_13001583_13008455_13008632_13012972_13013026_13015327_13015449_13017187_13017337_13018479_13018616_13019081
transcript_94402.known	chr18	+	7960	45	FSM	ENSG00000101639.19	ENST00000506447.5	7960	45	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_10	18.5691136964335	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGTATATCCAGAAATTT	12989116	True	NA	9	True	AATAAA	-18	NA	12991361	13125036	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_12991438_12999420_12999589_13001456_13001583_13008455_13008632_13012972_13013026_13015327_13015449_13017187_13017337_13018479_13018616_13019081_13019207_13029662_13030003_13030464_13030609_13037236_13037302_13038369_13038580_13040829_13040957_13042203_13042335_13048858_13049682_13049764_13049892_13052918_13053091_13055779_13056699_13057584_13057734_13059081_13059313_13067830_13067957_13068093_13068238_13068358_13068423_13068851_13068992_13069088_13069182_13069737_13069857_13071038_13071213_13072754_13072846_13073008_13073186_13087016_13087278_13087530_13087647_13089455_13089566_13092376_13092528_13095502_13095682_13096183_13096308_13099475_13099582_13100304_13100513_13103508_13103589_13104983_13105080_13113585_13113706_13114129_13114252_13116376_13116504_13117584_13117644_13124631
transcript_94405.known	chr18	+	6236	12	FSM	ENSG00000101654.18	ENST00000383314.7	6236	12	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	27.2509003566476	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTTTGGTTCATTTAC	13721506	True	NA	13	True	AATAAA	-20	NA	13726672	13764556	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_13726730_13730626_13730756_13731475_13731935_13734463_13734600_13737009_13737136_13740166_13740280_13741509_13741692_13742487_13742653_13746219_13746338_13752325_13752428_13754113_13754148_13759941
transcript_94407.known	chr18	+	4108	12	FSM	ENSG00000101654.18	ENST00000592764.5	4108	12	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_11	34.9729529496228	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTTTGGTTCATTTAC	13721537	True	NA	13	True	AATAAA	-20	NA	13726703	13764556	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_13726730_13730626_13730756_13731475_13731935_13734463_13734600_13737009_13737136_13740166_13740280_13741509_13741692_13742487_13742653_13746219_13746338_13752325_13752428_13754113_13754148_13762038
transcript_94411.known	chr18	+	1849	11	FSM	ENSG00000101654.18	ENST00000543302.6	1849	11	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	15.7480157480236	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTCCACAGTGTTCAGA	13721493	True	NA	8	True	CATAAA	-31	NA	13726659	13760285	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_13726730_13731475_13731935_13734463_13734600_13737009_13737136_13740166_13740280_13741509_13741692_13742487_13742653_13746219_13746338_13752325_13752428_13754113_13754148_13759941
transcript_94413.nic	chr18	+	4040	11	NIC	ENSG00000101654.18	novel	4108	12	NA	NA	-17	0	intron_retention	FALSE	canonical	3	39	junction_10	29.9708191412914	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTTTGGTTCATTTAC	13721476	True	NA	13	True	AATAAA	-20	NA	13726642	13764556	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_+_13726730_13731475_13731935_13734463_13734600_13737009_13737136_13740166_13740280_13741509_13741692_13742487_13742653_13746219_13746338_13752325_13752428_13754113_13754148_13762038
transcript_94414.nic	chr18	+	1463	9	ISM	ENSG00000101654.18	ENST00000383314.7	6236	12	-30	18271	-17	3211	5prime_fragment	FALSE	canonical	3	48	junction_1	29.2208722491304	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATTAAGAACAATGAAAATA	13721476	True	NA	NA	False	AAGAAA	-2	NA	13726642	13746285	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_13726730_13730626_13730756_13731475_13731935_13734463_13734600_13737009_13737136_13740166_13740280_13741509_13741692_13742487_13742653_13746219
transcript_94417.nic	chr18	+	1334	8	ISM	ENSG00000101654.18	ENST00000543302.6	1849	11	-17	14000	-17	3211	5prime_fragment	FALSE	canonical	3	89	junction_1	16.6647617959059	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATTAAGAACAATGAAAATA	13721476	True	NA	NA	False	AAGAAA	-2	NA	13726642	13746285	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_13726730_13731475_13731935_13734463_13734600_13737009_13737136_13740166_13740280_13741509_13741692_13742487_13742653_13746219
transcript_94421.nic	chr18	+	909	5	ISM	ENSG00000101654.18	ENST00000383314.7	6236	12	-30	27449	-17	5286	5prime_fragment	FALSE	canonical	3	48	junction_1	32.3911639185751	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGAATTAACAAGCTAGT	13721476	True	NA	NA	False	NA	NA	NA	13726642	13737107	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_13726730_13730626_13730756_13731475_13731935_13734463_13734600_13737009
transcript_94428.nic	chr18	+	780	4	ISM	ENSG00000101654.18	ENST00000543302.6	1849	11	-17	23178	-17	5286	5prime_fragment	FALSE	canonical	3	89	junction_1	18.8030730348939	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGAATTAACAAGCTAGT	13721476	True	NA	NA	False	NA	NA	NA	13726642	13737107	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_13726730_13731475_13731935_13734463_13734600_13737009
transcript_94429.known	chr18	-	1091	4	FSM	ENSG00000177150.13	ENST00000592976.5	1091	4	0	0	0	0	multi-exon	TRUE	canonical	3	168	junction_2	5.31245915016974	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTGGAATAAGGTGCC	-13723181	True	NA	70	True	AAAAAG	-13	NA	13726586	13666493	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_13666714_13671861_13671974_13681604_13682106_13726328
transcript_94435.nic	chr18	+	438	3	ISM	ENSG00000101654.18	ENST00000383314.7	6236	12	-30	32859	-17	-124	5prime_fragment	FALSE	canonical	3	48	junction_1	17	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTGAAGATGATCTTGT	13721476	True	NA	NA	False	AAGAAA	-8	NA	13726642	13731697	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_13726730_13730626_13730756_13731475
transcript_94436.nic	chr18	+	562	3	ISM	ENSG00000101654.18	ENST00000383314.7	6236	12	-30	32735	-17	0	5prime_fragment	FALSE	canonical	3	48	junction_1	17	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAGAAAAGAAAAAGAGAA	13721476	True	NA	NA	False	AAAAAG	-25	NA	13726642	13731821	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_13726730_13730626_13730756_13731475
transcript_94439.known	chr18	-	1389	3	FSM	ENSG00000177150.13	ENST00000588475.1	1389	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	84	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTAGTCTTTCTATAAAA	-13723100	True	NA	NA	False	NA	NA	NA	13726505	13666002	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_13666714_13681604_13682106_13726328
transcript_94442.nic	chr18	+	448	2	ISM	ENSG00000101654.18	ENST00000543302.6	1849	11	-17	28449	-17	15	5prime_fragment	FALSE	canonical	3	89	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAACTGAGGATGTTCCA	13721476	True	NA	NA	False	AAAAAG	-40	NA	13726642	13731836	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_13726730_13731475
transcript_94443.nic	chr18	+	514	2	ISM	ENSG00000101654.18	ENST00000543302.6	1849	11	-17	28383	-17	81	5prime_fragment	FALSE	canonical	3	89	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCACTTGAGGATGTTCCT	13721476	True	NA	NA	False	GATAAA	-38	NA	13726642	13731902	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_13726730_13731475
transcript_94444.known	chr18	-	1095	2	FSM	ENSG00000177150.13	ENST00000585785.1	1095	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAAAATGGACCCTTTA	-13723187	True	NA	-90	True	AATAAA	-43	NA	13726592	13665882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_13666714_13726328
transcript_94446.known	chr18	+	1723	2	FSM	ENSG00000176136.6	ENST00000589410.2	1723	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTACTTCTGTCAATCAT	13824125	True	NA	NA	False	NA	NA	NA	13824148	13827323	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_13824275_13825726
transcript_94456.nic	chr18	-	2036	6	NIC	ENSG00000175322.12	novel	2114	5	NA	NA	15	-202	combination_of_known_junctions	FALSE	canonical	3	5	junction_4	14.2351677194194	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATATATGTGGAGTTTT	-14131106	True	NA	NA	False	AATATA	-45	NA	14132475	14076195	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_14077527_14078199_14078299_14080188_14080267_14084876_14085077_14124349_14124477_14132274
transcript_94457.known	chr18	-	558	5	FSM	ENSG00000175322.12	ENST00000592049.5	558	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	6.36396103067893	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGGGGAGATGATGTCACA	-14131065	True	NA	NA	False	NA	NA	NA	14132434	14077505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_14077527_14078199_14078299_14080188_14080267_14084876_14085077_14132274
transcript_94462.known	chr18	-	2117	3	FSM	ENSG00000175322.12	ENST00000589498.5	2117	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	21.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGCAAGGATTTTCTTC	-14131059	True	NA	-13	True	AATAAA	-26	NA	14132428	14099937	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_14101774_14124349_14124477_14132274
transcript_94463.known	chr18	-	6760	3	FSM	ENSG00000175322.12	ENST00000590202.3	6760	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	10.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGCAAGGATTTTCTTC	-14131066	True	NA	-13	True	AATAAA	-26	NA	14132435	14099937	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_14106410_14124349_14124477_14132274
transcript_94464.known	chr18	-	599	2	FSM	ENSG00000175322.12	ENST00000588435.1	599	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAATGAATGTGAAAAAGT	-14131088	True	NA	NA	False	AGTAAA	-37	NA	14132457	14105993	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_14106410_14132274
transcript_94468.nic	chr18	-	3517	22	ISM	ENSG00000067900.8	ENST00000635540.1	5656	34	-795	30000	-2	-9994	5prime_fragment	TRUE	canonical	3	97	junction_21	24.5459447029554	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAGAGAAAATTTAAAGAAAA	-21111752	False	NA	-3	True	TATAAA	-42	NA	21111815	20979951	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_20980005_20982762_20982833_20984350_20984536_20986949_20987111_20991175_20991327_20992830_20992938_21006350_21006598_21006698_21006791_21008058_21008195_21015430_21015480_21020150_21020240_21023619_21023681_21028775_21028936_21039471_21039564_21042096_21042236_21042564_21042710_21044101_21044187_21045291_21045468_21049091_21049230_21049779_21049881_21070531_21070614_21110817
transcript_9447.known	chr1	-	1556	10	FSM	ENSG00000121310.17	ENST00000371522.9	1556	10	0	0	0	0	multi-exon	TRUE	canonical	2	14	junction_6	28.1810723626013	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACAGTGTTTTCGTGAGG	-52920760	True	NA	2	True	AATAAA	-38	NA	52921740	52895909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_52896598_52897436_52897485_52899173_52899225_52904645_52904834_52905033_52905091_52906518_52906612_52907867_52907955_52911565_52911654_52911722_52911791_52921552
transcript_94470.nic	chr18	-	3323	20	ISM	ENSG00000067900.8	ENST00000635540.1	5656	34	-799	34474	-6	-14468	5prime_fragment	FALSE	canonical	3	97	junction_19	23.2307466523937	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAGATGAAACAGGAAATAA	-21111756	False	NA	NA	False	TTTAAA	-13	NA	21111819	20984425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_20984536_20986949_20987111_20991175_20991327_20992830_20992938_21006350_21006598_21006698_21006791_21008058_21008195_21015430_21015480_21020150_21020240_21023619_21023681_21028775_21028936_21039471_21039564_21042096_21042236_21042564_21042710_21044101_21044187_21045291_21045468_21049091_21049230_21049779_21049881_21070531_21070614_21110817
transcript_94475.nic	chr18	-	3046	18	ISM	ENSG00000067900.8	ENST00000635540.1	5656	34	-793	41224	0	-21218	5prime_fragment	FALSE	canonical	3	97	junction_17	23.054921638659	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGTCAGTTTTAATAT	-21108816	True	NA	NA	False	NA	NA	NA	21111813	20991175	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_20991327_20992830_20992938_21006350_21006598_21006698_21006791_21008058_21008195_21015430_21015480_21020150_21020240_21023619_21023681_21028775_21028936_21039471_21039564_21042096_21042236_21042564_21042710_21044101_21044187_21045291_21045468_21049091_21049230_21049779_21049881_21070531_21070614_21110817
transcript_94478.nic	chr18	-	2931	17	ISM	ENSG00000067900.8	ENST00000635540.1	5656	34	-880	42930	-87	-22924	5prime_fragment	FALSE	canonical	3	97	junction_16	23.7295141911924	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTGGAAGGAGAAAGAAAAGA	NA	False	NA	-4	True	NA	NA	NA	21111900	20992881	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_20992938_21006350_21006598_21006698_21006791_21008058_21008195_21015430_21015480_21020150_21020240_21023619_21023681_21028775_21028936_21039471_21039564_21042096_21042236_21042564_21042710_21044101_21044187_21045291_21045468_21049091_21049230_21049779_21049881_21070531_21070614_21110817
transcript_94483.nic	chr18	-	2410	14	ISM	ENSG00000067900.8	ENST00000635540.1	5656	34	-783	58136	10	36957	5prime_fragment	FALSE	canonical	3	97	junction_13	24.4334623588274	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAGAAGAGAAGAAATGTAG	-21108806	True	NA	-1	True	AAGAAA	-16	NA	21111803	21008087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_21008195_21015430_21015480_21020150_21020240_21023619_21023681_21028775_21028936_21039471_21039564_21042096_21042236_21042564_21042710_21044101_21044187_21045291_21045468_21049091_21049230_21049779_21049881_21070531_21070614_21110817
transcript_94484.nic	chr18	-	2320	13	ISM	ENSG00000067900.8	ENST00000635540.1	5656	34	-823	65502	-30	29591	5prime_fragment	FALSE	canonical	3	97	junction_12	23.9911731453234	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATGAAAGAATTGGATGAA	-21111780	True	NA	-24	True	CATAAA	-12	NA	21111843	21015453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_21015480_21020150_21020240_21023619_21023681_21028775_21028936_21039471_21039564_21042096_21042236_21042564_21042710_21044101_21044187_21045291_21045468_21049091_21049230_21049779_21049881_21070531_21070614_21110817
transcript_94485.nic	chr18	-	1735	5	ISM	ENSG00000067900.8	ENST00000635540.1	5656	34	-788	95093	5	0	5prime_fragment	FALSE	canonical	3	97	junction_4	14.3788038445484	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	-21108811	True	NA	NA	False	NA	NA	NA	21111808	21045044	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_21045468_21049091_21049230_21049779_21049881_21070531_21070614_21110817
transcript_94486.nic	chr18	-	1042	2	ISM	ENSG00000067900.8	ENST00000635540.1	5656	34	-780	120603	13	-25510	5prime_fragment	FALSE	canonical	3	97	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGACAACTTTTTAAGCA	-21108803	True	NA	NA	False	AAGAAA	-10	NA	21111800	21070554	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_21070614_21110817
transcript_94489.known	chr18	-	4488	12	FSM	ENSG00000141446.11	ENST00000269214.10	4488	12	0	0	0	0	multi-exon	TRUE	canonical	3	173	junction_3	28.0592643176828	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAATGGTGTGTTGTCAT	-21595721	True	NA	14	True	AATAAA	-42	NA	21600704	21529283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_21530491_21532472_21532661_21536041_21536186_21539919_21540010_21560858_21560991_21564202_21564318_21566145_21566207_21567979_21568095_21573313_21575431_21575671_21575778_21584309_21584441_21600622
transcript_94494.nic	chr18	-	2565	4	ISM	ENSG00000141446.11	ENST00000383276.1	4773	13	-116	44178	-116	19562	5prime_fragment	FALSE	canonical	3	193	junction_1	26.2847653382884	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAGAAATTAATTCTGAA	NA	False	NA	NA	False	AATATA	-20	NA	21601000	21573480	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_21575431_21575671_21575778_21584309_21584441_21600622
transcript_94497.nic	chr18	-	1505	4	ISM	ENSG00000141446.11	ENST00000383276.1	4773	13	-116	45238	-116	18502	5prime_fragment	FALSE	canonical	3	193	junction_1	26.2847653382884	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATCTCAGAAAAAATTAGT	NA	False	NA	NA	False	AAAAAG	-4	NA	21601000	21574540	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_21575431_21575671_21575778_21584309_21584441_21600622
transcript_94499.nic	chr18	-	1316	4	ISM	ENSG00000141446.11	ENST00000383276.1	4773	13	-116	45427	-116	18313	5prime_fragment	FALSE	canonical	3	193	junction_1	26.2847653382884	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGTCCAAAGGAGACTAT	NA	False	NA	NA	False	NA	NA	NA	21601000	21574729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_21575431_21575671_21575778_21584309_21584441_21600622
transcript_9450.known	chr1	-	1126	9	FSM	ENSG00000121310.17	ENST00000358358.9	1126	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	20.4446661748242	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTCTGAGTCTTGGTAT	-52920746	True	NA	-19	True	ATTAAA	-5	NA	52921726	52896232	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_52896598_52897436_52897485_52899173_52899225_52904645_52904834_52905033_52905091_52907867_52907955_52911565_52911654_52911722_52911791_52921552
transcript_94501.nic	chr18	-	1264	4	ISM	ENSG00000141446.11	ENST00000383276.1	4773	13	-116	45479	-116	18261	5prime_fragment	FALSE	canonical	3	193	junction_1	26.2847653382884	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAGAATTCAGAAACAGAAA	NA	False	NA	NA	False	AAAAAG	-7	NA	21601000	21574781	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_21575431_21575671_21575778_21584309_21584441_21600622
transcript_94503.nnic	chr18	-	726	4	NNC	ENSG00000141446.11	novel	4488	12	NA	NA	47	17858	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	101.141265344841	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAATTAAAAAATTAACAAA	-21595674	True	NA	NA	False	GATAAA	-39	NA	21600657	21575184	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr18_-_21575431_21575671_21575778_21584309_21584441_21600414
transcript_94504.nic	chr18	-	738	4	ISM	ENSG00000141446.11	ENST00000383276.1	4773	13	7	45882	7	17858	5prime_fragment	FALSE	canonical	3	193	junction_1	26.2847653382884	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAATTAAAAAATTAACAAA	-21600543	True	NA	NA	False	GATAAA	-39	NA	21600877	21575184	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_21575431_21575671_21575778_21584309_21584441_21600622
transcript_94509.known	chr18	+	4858	4	FSM	ENSG00000167088.11	ENST00000300413.10	4858	4	0	0	0	0	multi-exon	FALSE	canonical	3	5573	junction_3	265.557275680157	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCGTTTTTTTTTCTTTT	21554396	True	NA	17	True	AATAAA	-14	NA	21612313	21633520	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_21612444_21622724_21622802_21623747_21623940_21629061
transcript_94510.known	chr18	+	320	4	FSM	ENSG00000167088.11	ENST00000579618.1	320	4	0	0	0	0	multi-exon	FALSE	canonical	3	533	junction_2	2533.03314010869	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGGAAGAGGGGGTCCT	21554396	True	NA	43	True	NA	NA	NA	21612313	21629109	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_21612444_21622724_21622802_21623874_21623940_21629061
transcript_94512.known	chr18	+	723	3	FSM	ENSG00000167088.11	ENST00000582475.1	723	3	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_1	2695	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAATAGGCTCAGAGGCT	21554413	True	NA	NA	False	NA	NA	NA	21612330	21629479	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_21612444_21623747_21623940_21629061
transcript_94518.nic	chr18	-	2522	9	NIC	ENSG00000158201.10	novel	2029	9	NA	NA	-47	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_4	26.9490259564237	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCCTTTGTGAGTTTTT	-21703274	True	NA	-6	True	AATAAA	-16	NA	21704827	21650900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_21651764_21656860_21657027_21657103_21657153_21659169_21659344_21663677_21664231_21683919_21683966_21702315_21702499_21703583_21703748_21704503
transcript_94519.known	chr18	-	2029	9	FSM	ENSG00000158201.10	ENST00000289119.7	2029	9	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	24.8646335183127	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCCTTTGTGAGTTTTT	-21703221	True	NA	-6	True	AATAAA	-16	NA	21704774	21650900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_21651764_21656860_21657027_21657103_21657153_21659169_21659344_21664117_21664231_21683919_21683966_21702315_21702499_21703583_21703748_21704503
transcript_94520.nic	chr18	-	2476	8	NIC	ENSG00000158201.10	novel	2029	9	NA	NA	-47	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_5	37.1324161149071	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCCTTTGTGAGTTTTT	-21703274	True	NA	-6	True	AATAAA	-16	NA	21704827	21650900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_21651764_21656860_21657027_21657103_21657153_21659169_21659344_21663677_21664231_21702315_21702499_21703583_21703748_21704503
transcript_94522.known	chr18	-	1836	7	FSM	ENSG00000158201.10	ENST00000580981.5	1836	7	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_4	33.0928827527746	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTAAAATAAATTCTACCA	-21703214	True	NA	-33	True	TTTAAA	-31	NA	21704767	21650927	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_21651764_21656860_21657027_21657103_21657153_21659169_21659344_21702315_21702499_21703583_21703748_21704503
transcript_94525.known	chr18	-	1664	3	FSM	ENSG00000158201.10	ENST00000579982.1	1664	3	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	2.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTGGACTCCAGCCTG	-21703227	True	NA	NA	False	NA	NA	NA	21704780	21701275	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_21702499_21703583_21703748_21704503
transcript_94526.known	chr18	+	10100	21	FSM	ENSG00000101752.12	ENST00000261537.7	10100	21	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	12.1466044637997	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTTATATTTTTCATC	21738704	True	NA	7	True	AATAAA	-15	NA	21740791	21870953	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_21741813_21765771_21765944_21768622_21768753_21773623_21773729_21778102_21778170_21779480_21779686_21791373_21791558_21798083_21798229_21799840_21799975_21803906_21804015_21815615_21815814_21819494_21819647_21838364_21838498_21843130_21843218_21844091_21844254_21846943_21847126_21849195_21849389_21853139_21853219_21857129_21857244_21858545_21858647_21864525
transcript_94533.known	chr18	+	3275	19	FSM	ENSG00000101773.19	ENST00000327155.10	3275	19	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_8	26.6149962369217	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGTAGTCTGTGATTTG	22930385	True	NA	15	True	AATACA	-16	NA	22933327	23026486	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_22933565_22936753_22936961_22946443_22946487_22949617_22949714_22968805_22968919_22975152_22975220_22982217_22982394_22984885_22984991_22989220_22989319_22990936_22991050_22992747_22993640_22993720_22993848_22996373_22996463_22997619_22997735_23001585_23001730_23006362_23006433_23016827_23016925_23022128_23022271_23026142
transcript_94534.nic	chr18	+	3371	19	NIC	ENSG00000101773.19	novel	3293	19	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	47.5043857624395	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGTAGTCTGTGATTTG	22930884	False	NA	15	True	AATACA	-16	NA	22933826	23026486	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_+_22934160_22936753_22936961_22946443_22946487_22949617_22949714_22968805_22968919_22975152_22975220_22982217_22982394_22984885_22984991_22989220_22989319_22990936_22991050_22992747_22993640_22993720_22993848_22996373_22996463_22997619_22997735_23001585_23001730_23006362_23006433_23016827_23016925_23022128_23022271_23026142
transcript_94536.known	chr18	+	3293	19	FSM	ENSG00000101773.19	ENST00000399722.6	3293	19	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	46.7478130471507	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTAGTCTGTGATTTGTT	22930883	False	NA	17	True	AATACA	-18	NA	22933825	23026488	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_22934079_22936753_22936961_22946443_22946487_22949617_22949714_22968805_22968919_22975152_22975220_22982217_22982394_22984885_22984991_22989220_22989319_22990936_22991050_22992747_22993640_22993720_22993848_22996373_22996463_22997619_22997735_23001585_23001730_23006362_23006433_23016827_23016925_23022128_23022271_23026142
transcript_94538.nic	chr18	+	3207	18	NIC	ENSG00000101773.19	novel	3275	19	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_15	49.0880150137799	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGTAGTCTGTGATTTG	NA	False	NA	15	True	AATACA	-16	NA	22933325	23026486	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_+_22933565_22936753_22936961_22946443_22946487_22949617_22949714_22968805_22968919_22975152_22975220_22982217_22982394_22984885_22984991_22989220_22989319_22990936_22991050_22992747_22993640_22993720_22993848_22996373_22996463_22997619_22997735_23001585_23001730_23016827_23016925_23022128_23022271_23026142
transcript_9454.known	chr1	-	2645	8	FSM	ENSG00000121310.17	ENST00000460612.5	2645	8	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_4	28.88824349532	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGGTATCATTGGCTCT	-52920782	True	NA	-9	True	ATTAAA	-15	NA	52921762	52896222	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_52896598_52899173_52899225_52904645_52904834_52905033_52906612_52907867_52907955_52911565_52911654_52911722_52911791_52921552
transcript_94552.known	chr18	+	2229	11	FSM	ENSG00000101773.19	ENST00000399721.6	2229	11	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	58.3030016379946	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCTTTAAAATTCCTC	22932815	True	NA	NA	False	AATAAA	-45	NA	22933875	22993569	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_22934265_22936753_22936961_22946443_22946487_22949617_22949714_22968805_22968919_22975152_22975220_22982217_22982394_22984885_22984991_22989220_22989319_22990936_22991050_22992747
transcript_94553.nic	chr18	+	2173	11	ISM	ENSG00000101773.19	ENST00000399725.6	3260	18	-14	32917	1	0	5prime_fragment	FALSE	canonical	3	32	junction_1	50.7858247939324	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCTTTAAAATTCCTC	22930884	False	NA	NA	False	AATAAA	-45	NA	22933826	22993569	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_22934160_22936753_22936961_22946443_22946487_22949617_22949714_22968805_22968919_22975152_22975220_22982217_22982394_22984885_22984991_22989220_22989319_22990936_22991050_22992747
transcript_94560.known	chr18	+	5283	10	FSM	ENSG00000134508.13	ENST00000256925.12	5283	10	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	5.44557811326349	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGAGTTCTTTATCTC	23134177	True	NA	16	True	AATAAA	-17	NA	23135484	23260470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_23136608_23188837_23188910_23194447_23194541_23213976_23214055_23234607_23234705_23235894_23236052_23237141_23237246_23252959_23253067_23253728_23253937_23257226
transcript_94566.known	chr18	-	1022	16	FSM	ENSG00000134490.14	ENST00000542162.5	1022	16	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_9	26.2317873326746	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAGACGGTCAAGAGAAA	-23436107	True	NA	NA	False	NA	NA	NA	23437869	23298007	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_23298068_23309679_23309745_23352195_23352290_23356593_23356664_23365633_23365669_23368714_23368751_23370215_23370262_23371421_23371471_23373711_23373764_23376826_23376942_23377645_23377672_23384989_23385068_23399565_23399648_23421366_23421445_23430630_23430678_23437780
transcript_94574.known	chr18	-	2994	15	FSM	ENSG00000134490.14	ENST00000383233.8	2994	15	0	0	0	0	multi-exon	TRUE	canonical	3	68	junction_7	13.3973801886177	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCACTTGTTTCTGAACC	-23436199	True	NA	-24	True	AATAAA	-16	NA	23437961	23296012	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_23298068_23309679_23309745_23352195_23352290_23356593_23356664_23365633_23365669_23368714_23368751_23370215_23370262_23371421_23371471_23373711_23373764_23377645_23377672_23384989_23385068_23399565_23399648_23421366_23421445_23430630_23430678_23437780
transcript_9458.known	chr1	-	5817	1	FSM	ENSG00000121310.17	ENST00000539680.1	5817	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTTGGTATCATTGGCT	NA	False	NA	-11	True	ATTAAA	-13	NA	52902041	52896224	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_52896200_52902000
transcript_94580.known	chr18	-	2941	14	FSM	ENSG00000134490.14	ENST00000473688.5	2941	14	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_7	20.608207705962	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGTCACTTGTTTCTG	-23436199	True	NA	-28	True	AATAAA	-12	NA	23437961	23296016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_23298068_23309679_23309745_23352195_23352290_23356593_23356664_23365633_23365669_23368714_23368751_23370215_23370262_23373711_23373764_23377645_23377672_23384989_23385068_23399565_23399648_23421366_23421445_23430630_23430678_23437780
transcript_9459.known	chr1	+	2759	16	FSM	ENSG00000116171.19	ENST00000371514.8	2759	16	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	344.763429357324	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTATCTGGACATAATCAC	52926774	True	NA	102	True	AATAAA	-30	NA	52927275	53051698	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_52927466_52941795_52941854_52948008_52948081_52950754_52950887_52954739_52954805_52961502_52961630_52974768_52974833_52976682_52976770_52978216_52978368_52980395_52980544_52988028_52988137_53014889_53015044_53027968_53028072_53038916_53039047_53047857_53047938_53050608
transcript_94596.known	chr18	+	3574	13	FSM	ENSG00000101782.15	ENST00000339486.8	3574	13	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_5	10.2479672781159	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTGTGTGGTATCTTC	23451959	True	NA	19	True	ATTAAA	-21	NA	23453286	23483140	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_23453503_23462963_23463080_23463966_23464113_23464205_23464314_23464518_23464629_23466132_23466277_23467398_23467527_23473428_23473627_23474947_23475108_23477005_23477087_23477178_23477269_23479316_23479425_23481171
transcript_94600.known	chr18	+	1966	13	FSM	ENSG00000101782.15	ENST00000581585.5	1966	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	33.3394786002021	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAACTTGGGTAACAC	23451959	True	NA	105	True	NA	NA	NA	23453286	23481580	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_23453503_23462963_23463080_23464014_23464113_23464205_23464314_23464518_23464629_23466132_23466277_23467398_23467527_23473428_23473627_23474947_23475108_23477005_23477087_23477178_23477269_23479316_23479425_23481171
transcript_94612.known	chr18	+	659	3	FSM	ENSG00000101782.15	ENST00000584052.5	659	3	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	4	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATCCCTACAGACCAGG	23451960	True	NA	NA	False	NA	NA	NA	23453287	23464294	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_23453503_23462963_23463080_23463966
transcript_94613.known	chr18	+	1904	13	FSM	ENSG00000101782.15	ENST00000577501.5	1904	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	34.0657044873906	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTAACAGCTATAGGTT	23451980	True	NA	25	True	AATAAA	-39	NA	23453307	23481500	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_23453503_23462963_23463080_23463966_23464113_23464205_23464314_23464518_23464629_23466132_23466277_23467398_23467527_23473428_23473627_23474947_23475108_23477005_23477087_23477178_23477269_23479325_23479425_23481171
transcript_94617.known	chr18	-	4760	25	FSM	ENSG00000141458.13	ENST00000269228.10	4760	25	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_14	13.254912611305	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATCTAACCTGTCCTTA	-23583986	True	NA	54	True	AATACA	-19	NA	23586506	23531441	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_23532285_23533354_23533518_23534445_23534560_23535468_23535701_23536672_23536877_23538541_23538672_23539354_23539471_23539810_23540002_23540447_23540538_23541067_23541209_23541305_23541434_23543454_23543570_23544343_23544527_23544959_23545150_23548005_23548109_23551626_23551728_23554757_23554985_23556242_23556614_23557116_23557191_23560230_23560481_23561359_23561528_23568822_23568999_23572073_23572181_23573451_23573575_23586286
transcript_9462.known	chr1	+	1889	15	FSM	ENSG00000116171.19	ENST00000371509.8	1889	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	353.116706151472	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAATTAGGAACAGTAA	52926784	True	NA	NA	False	NA	NA	NA	52927285	53050970	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_52927466_52941795_52941854_52948008_52948081_52954739_52954805_52961502_52961630_52974768_52974833_52976682_52976770_52978216_52978368_52980395_52980544_52988028_52988137_53014889_53015044_53027968_53028072_53038916_53039047_53047857_53047938_53050608
transcript_94627.nic	chr18	-	4472	23	NIC	ENSG00000141458.13	novel	4760	25	NA	NA	5	-60	combination_of_known_junctions	FALSE	canonical	3	8	junction_14	23.4758976099965	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTTGGGGTTACCCTA	-23583962	True	NA	-6	True	AATAAA	-15	NA	23586482	23531501	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_23532285_23533354_23533518_23534445_23534560_23535468_23535701_23536672_23536877_23538541_23538672_23539354_23539471_23539810_23540002_23540447_23540538_23541067_23541209_23541305_23541434_23543454_23543570_23544343_23544527_23544959_23545150_23554757_23554985_23556242_23556614_23557116_23557191_23560230_23560481_23561359_23561528_23568822_23568999_23572073_23572181_23573451_23573575_23586286
transcript_94640.known	chr18	+	2200	20	FSM	ENSG00000141452.10	ENST00000269221.8	2200	20	0	0	0	0	multi-exon	FALSE	non_canonical	3	80	junction_18	14.1646432751966	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTATAGAACTTGTGGG	23502114	True	NA	NA	False	TATAAA	-42	NA	23503510	23531822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_23503721_23504370_23504448_23506969_23507055_23507984_23508042_23509192_23509280_23515855_23515997_23516319_23516424_23518889_23518980_23519068_23519175_23520201_23520314_23524129_23524175_23524428_23524483_23526636_23526766_23527794_23527902_23529178_23529299_23529634_23529713_23530027_23530133_23530228_23530298_23530386_23530613_23531624
transcript_94641.nic	chr18	+	2096	20	NIC	ENSG00000141452.10	novel	2200	20	NA	NA	-19	0	combination_of_known_junctions	FALSE	non_canonical	3	10	junction_18	24.2899156029822	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTATAAAGTGTATCTACA	NA	False	NA	NA	False	AATAAA	-19	NA	23503450	23531782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_+_23503721_23504370_23504448_23506969_23507055_23507984_23508042_23509192_23509280_23515855_23515997_23516319_23516424_23518889_23518980_23519068_23519175_23520201_23520314_23524129_23524175_23524428_23524483_23526636_23526766_23527794_23527902_23529178_23529299_23529634_23529713_23530027_23530133_23530228_23530298_23530510_23530613_23531624
transcript_94647.nic	chr18	+	2075	19	NIC	ENSG00000141452.10	novel	2200	20	NA	NA	0	0	combination_of_known_junctions	FALSE	non_canonical	2	2	junction_2	26.4962727404404	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTATAAAGTGTATCTACA	23502114	True	NA	NA	False	AATAAA	-19	NA	23503510	23531782	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_+_23503721_23504370_23504448_23507984_23508042_23509192_23509280_23515855_23515997_23516319_23516424_23518889_23518980_23519068_23519175_23520201_23520314_23524129_23524175_23524428_23524483_23526636_23526766_23527794_23527902_23529178_23529299_23529634_23529713_23530027_23530133_23530228_23530298_23530386_23530613_23531624
transcript_94649.known	chr18	+	2002	18	FSM	ENSG00000141452.10	ENST00000590868.5	2002	18	0	0	0	0	multi-exon	FALSE	non_canonical	1	3	junction_3	27.1616970284835	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAATGTTATAAAGTGTA	23502122	True	NA	NA	False	AATAAA	-13	NA	23503518	23531776	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_23503721_23504370_23504448_23506969_23507055_23515855_23515997_23516319_23516424_23518889_23518980_23519068_23519175_23520201_23520314_23524129_23524175_23524428_23524483_23526636_23526766_23527794_23527902_23529178_23529299_23529634_23529713_23530027_23530133_23530228_23530298_23530386_23530613_23531624
transcript_9465.known	chr1	-	1102	8	FSM	ENSG00000162384.14	ENST00000294360.5	1102	8	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_7	45.6499547354314	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTGTTATCTTCAGTTG	-53216510	True	NA	0	True	ATTAAA	-18	NA	53220634	53214098	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_53214737_53215990_53216057_53216781_53216860_53218171_53218204_53218413_53218496_53218866_53218924_53220260_53220345_53220569
transcript_94660.known	chr18	+	2102	20	FSM	ENSG00000141452.10	ENST00000590870.5	2102	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	26.3985015943442	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATTTATTGCATTAATAA	23502136	True	NA	NA	False	TATAAA	-14	NA	23503532	23531743	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_23503721_23504370_23504448_23506969_23507055_23507984_23508042_23509192_23509280_23515855_23515997_23516319_23516424_23518889_23518980_23519068_23519175_23520201_23520314_23524129_23524159_23524409_23524483_23526636_23526766_23527794_23527902_23529178_23529299_23529634_23529713_23530027_23530133_23530228_23530298_23530386_23530613_23531624
transcript_94661.known	chr18	-	3387	10	FSM	ENSG00000154065.17	ENST00000592179.6	3387	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	19.0249997972129	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCCTTTGCTGCTTTTTT	-23662420	True	NA	NA	False	AATAAA	-18	NA	23662911	23598925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_23601310_23612091_23612191_23617731_23617828_23619530_23619630_23629852_23629952_23634050_23634150_23638848_23638948_23646188_23646288_23649082_23649194_23662709
transcript_94663.known	chr18	-	846	2	FSM	ENSG00000154065.17	ENST00000585908.2	846	2	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTGTTTTCCTGAAAACA	-23662281	True	NA	-21	True	AATAAA	-15	NA	23662772	23648410	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_23649194_23662709
transcript_94669.known	chr18	+	4896	14	FSM	ENSG00000168234.13	ENST00000317571.8	4896	14	0	0	0	0	multi-exon	TRUE	canonical	3	55	junction_10	8.29842788276453	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCATCTATGTGTGCTTC	24012794	True	NA	10	True	AAGAAA	-22	NA	24014753	24135600	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_24015039_24064139_24064189_24066011_24066141_24069156_24069272_24080584_24080940_24082912_24083082_24114553_24114648_24118124_24118233_24123833_24123944_24125426_24125551_24128885_24128984_24130312_24130418_24131881_24131921_24132484
transcript_94677.nnic	chr18	+	1227	3	NNC	ENSG00000168234.13	novel	1048	2	NA	NA	-249	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	88	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTTGAGATTCCTTTT	24014062	True	NA	7	True	ATTAAA	-18	NA	24014170	24020288	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr18_+_24014340_24014409_24015039_24019859
transcript_94678.known	chr18	+	1048	2	FSM	ENSG00000168234.13	ENST00000584250.1	1048	2	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTTGAGATTCCTTTT	24013765	False	NA	7	True	ATTAAA	-18	NA	24014419	24020288	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_24015039_24019859
transcript_94679.known	chr18	+	533	2	FSM	ENSG00000168234.13	ENST00000577185.1	533	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTGGCTTGAGATTCCT	24016611	False	NA	4	True	ATTAAA	-15	NA	24016633	24020285	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_24016741_24019859
transcript_94684.known	chr18	-	4152	28	FSM	ENSG00000141447.19	ENST00000319481.8	4152	28	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_19	98.4212134337526	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAAAGTGTGGTTTCTTT	-24392538	True	NA	-8	True	AATAAA	-16	NA	24397824	24162051	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_24163282_24165064_24165156_24166578_24166703_24167328_24167446_24170326_24170454_24171408_24171499_24172375_24172484_24178012_24178196_24179737_24179836_24181144_24181280_24196124_24196201_24225041_24225199_24239219_24239383_24280841_24280949_24303636_24303719_24311983_24312107_24314248_24314348_24317148_24317213_24317326_24317401_24318600_24318646_24318747_24318810_24332941_24333087_24334244_24334331_24341546_24341659_24366891_24366967_24368286_24368373_24377412_24377536_24397654
transcript_94707.nic	chr18	-	2647	24	ISM	ENSG00000141447.19	ENST00000319481.8	4152	28	-97	8315	-41	1113	5prime_fragment	FALSE	canonical	3	94	junction_15	87.2670758824958	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGATAAGAAAAATACAGAAG	-24392635	True	NA	NA	False	NA	NA	NA	24397921	24170366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_24170454_24171408_24171499_24172375_24172484_24178012_24178196_24179737_24179836_24181144_24181280_24196124_24196201_24225041_24225199_24239219_24239383_24280841_24280949_24303636_24303719_24311983_24312107_24314248_24314348_24317148_24317213_24317326_24317401_24318600_24318646_24318747_24318810_24332941_24333087_24334244_24334331_24341546_24341659_24366891_24366967_24368286_24368373_24377412_24377536_24397654
transcript_94713.nic	chr18	-	2507	23	ISM	ENSG00000141447.19	ENST00000319481.8	4152	28	-44	9357	12	71	5prime_fragment	FALSE	canonical	3	94	junction_14	87.0745382222126	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAATTTCTCTTTTAAAT	-24392582	True	NA	NA	False	GATAAA	-3	NA	24397868	24171408	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_24171499_24172375_24172484_24178012_24178196_24179737_24179836_24181144_24181280_24196124_24196201_24225041_24225199_24239219_24239383_24280841_24280949_24303636_24303719_24311983_24312107_24314248_24314348_24317148_24317213_24317326_24317401_24318600_24318646_24318747_24318810_24332941_24333087_24334244_24334331_24341546_24341659_24366891_24366967_24368286_24368373_24377412_24377536_24397654
transcript_94722.known	chr18	-	3317	14	FSM	ENSG00000141447.19	ENST00000399443.7	3317	14	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_13	48.857115668849	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGTTTCTTTTAAAATT	NA	False	NA	-1	True	AATAAA	-23	NA	24272232	24162044	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_24163282_24165064_24165156_24166578_24166703_24167328_24167446_24170326_24170454_24171408_24171499_24172375_24172484_24178012_24178196_24179737_24179836_24181144_24181280_24196124_24196201_24225041_24225199_24239219_24239383_24271621
transcript_9473.known	chr1	+	2739	6	FSM	ENSG00000157184.7	ENST00000637252.1	2739	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	128.023435354626	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTAATTTTTGCTTGAA	53191759	True	NA	-12	True	NA	NA	NA	53196799	53214177	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_53197096_53200718_53200800_53202322_53202430_53210014_53211320_53212780_53212817_53213263
transcript_94734.known	chr18	-	588	5	FSM	ENSG00000141447.19	ENST00000582350.5	588	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	86.3752713454493	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTATATTGGCCAGACTG	-24392498	True	NA	NA	False	NA	NA	NA	24397784	24347664	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_24347839_24366891_24366967_24368286_24368373_24377412_24377536_24397654
transcript_94736.nic	chr18	-	1938	5	NIC	ENSG00000141447.19	novel	1887	5	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	79.9202727723073	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTCTCATCATTTTTC	-24392635	True	NA	-13	True	AATAAA	-15	NA	24397921	24357124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_24358512_24366891_24366967_24368286_24368373_24377412_24377536_24397654
transcript_94746.nic	chr18	-	829	3	ISM	ENSG00000141447.19	ENST00000582350.5	588	5	-137	20269	-41	0	5prime_fragment	FALSE	canonical	3	214	junction_1	7.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAACAATGTCACA	-24392635	True	NA	NA	False	AATAAA	-7	NA	24397921	24367933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_24368373_24377412_24377536_24397654
transcript_94749.known	chr18	+	1305	6	FSM	ENSG00000154040.21	ENST00000399496.8	1305	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	13.4669966956259	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTTGTATTGCTTTTTT	24137516	True	NA	26	True	AATAAA	-16	NA	24139061	24161600	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_24139119_24143090_24143260_24143359_24143414_24155700_24156043_24159471_24160070_24161515
transcript_94750.known	chr18	+	2226	6	FSM	ENSG00000154040.21	ENST00000621648.4	2226	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	9.79795897113271	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAATTTTGTATTGCTTT	24137549	True	NA	23	True	AATAAA	-13	NA	24139094	24161597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_24139119_24143090_24143260_24143359_24143414_24155700_24157000_24159471_24160070_24161515
transcript_94754.known	chr18	+	2252	5	FSM	ENSG00000154040.21	ENST00000399481.6	2252	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	18.7749833555186	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTTTGTATTGCTTTTT	24137471	True	NA	25	True	AATAAA	-15	NA	24139016	24161599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_24139119_24143090_24143260_24155700_24157000_24159471_24160070_24161515
transcript_94755.known	chr18	+	3203	12	FSM	ENSG00000154059.11	ENST00000648078.1	3203	12	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_11	78.7412332782629	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTCTTCTATGGCTTAA	24426620	False	NA	-12	True	NA	NA	NA	24426633	24453510	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_24426793_24427918_24428048_24428868_24428922_24430321_24430385_24437954_24438041_24440495_24440619_24443048_24443153_24445392_24445467_24448092_24448184_24449818_24449954_24450778_24450815_24451360
transcript_94758.known	chr18	+	3734	11	FSM	ENSG00000154059.11	ENST00000284202.9	3734	11	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_1	14.7461859475595	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTATGACTGCATTGTA	24422412	True	NA	9	True	AATAAA	-20	NA	24426669	24453531	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_24426793_24427918_24428048_24428868_24428922_24430321_24430385_24437954_24438041_24440495_24440619_24443048_24443153_24445392_24445467_24448092_24448184_24449818_24449954_24450778
transcript_94763.known	chr18	+	570	7	FSM	ENSG00000154059.11	ENST00000578221.1	570	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	108.201586556452	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACACTTGGCTCCAGTGGT	24422484	True	NA	NA	False	NA	NA	NA	24426741	24443119	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_24426793_24427918_24428048_24428868_24428922_24430321_24430385_24437954_24438041_24440495_24440619_24443054
transcript_94766.known	chr18	-	4887	8	FSM	ENSG00000198795.11	ENST00000361524.8	4887	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_7	8.23630588879976	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTGTATTTGTGTGTT	-25351828	True	NA	0	True	AATAAA	-18	NA	25352166	25061923	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_25062742_25089464_25089581_25091949_25092082_25195159_25195245_25224344_25227698_25322007_25322188_25350906_25350948_25352004
transcript_94774.known	chr18	-	3402	11	FSM	ENSG00000141380.14	ENST00000415083.7	3402	11	0	0	0	0	multi-exon	TRUE	canonical	3	89	junction_3	224.36187287505	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCATTTGTTTCTTTA	-26082077	True	NA	-26	True	AATAAA	-17	NA	26090613	26016252	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_26018381_26032398_26032533_26035004_26035128_26035830_26035924_26038554_26038660_26039288_26039457_26052623_26052846_26057588_26057743_26078075_26078161_26087500_26087578_26090500
transcript_94775.known	chr18	-	2321	11	FSM	ENSG00000141380.14	ENST00000542420.6	2321	11	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_10	270.512476606903	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGACTTTACAAACCTTTG	-26090364	True	NA	-15	True	ATTAAA	-13	NA	26091217	26017342	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_26018381_26032398_26032533_26035004_26035128_26035830_26035924_26038554_26038660_26039288_26039457_26052623_26052846_26057588_26057743_26078075_26078161_26087500_26087578_26091095
transcript_94778.known	chr18	-	1840	11	FSM	ENSG00000141380.14	ENST00000579640.5	1840	11	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_8	246.225201797054	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACAGCATCAGAAATCCTC	-26082074	True	NA	58	True	NA	NA	NA	26090610	26017884	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_26018381_26032398_26032533_26035004_26035128_26038554_26038660_26039288_26039457_26052623_26052846_26057588_26057743_26078075_26078161_26082362_26082529_26087500_26087578_26090500
transcript_9478.known	chr1	+	2643	5	FSM	ENSG00000157184.7	ENST00000636867.1	2643	5	0	0	0	0	multi-exon	TRUE	canonical	3	51	junction_4	93.7319982716681	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTAATTTTTGCTTGAAG	53191751	True	NA	-11	True	NA	NA	NA	53196791	53214178	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_53197096_53200718_53200800_53202322_53202430_53210014_53211251_53213263
transcript_94788.known	chr18	-	1836	10	FSM	ENSG00000141380.14	ENST00000269137.11	1836	10	0	0	0	0	multi-exon	FALSE	canonical	3	491	junction_3	59.1466058844827	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATTTAATACTTTTCCAC	-26090048	False	NA	-71	True	NA	NA	NA	26090901	26018013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_26018381_26032398_26032533_26035004_26035128_26038554_26038660_26039288_26039457_26052623_26052846_26057588_26057743_26078075_26078161_26087500_26087578_26090500
transcript_94790.nic	chr18	-	3326	10	NIC	ENSG00000141380.14	novel	3402	11	NA	NA	-8	0	combination_of_known_junctions	TRUE	canonical	2	16	junction_9	202.505113485201	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCATTTGTTTCTTTA	NA	False	NA	-26	True	AATAAA	-17	NA	26091225	26016252	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_26018381_26032398_26032533_26035004_26035128_26038554_26038660_26039288_26039457_26052623_26052846_26057588_26057743_26078075_26078161_26087500_26087578_26091095
transcript_9480.known	chr1	+	2699	5	FSM	ENSG00000157184.7	ENST00000371486.4	2699	5	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_3	24.4182308941496	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTTCTTAATTTCTTTT	53191783	True	NA	8	True	AATAAA	-19	NA	53196823	53214197	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_53197096_53200718_53200800_53202322_53202430_53210014_53211320_53213263
transcript_94800.known	chr18	+	4751	15	FSM	ENSG00000141384.13	ENST00000269142.10	4751	15	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_6	12.442520907381	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTTGCTCATTCACTGA	26223941	True	NA	NA	False	ATTAAA	-22	NA	26226444	26391685	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_26227277_26265169_26265316_26267515_26267624_26274662_26274825_26274930_26275054_26281970_26282061_26285881_26286500_26292245_26292382_26293425_26293532_26315228_26315399_26321069_26321201_26327014_26327141_26335174_26335232_26357689_26357795_26389844
transcript_94810.nic	chr18	+	2357	9	ISM	ENSG00000141384.13	ENST00000269142.10	4751	15	-59	98177	-59	-96656	5prime_fragment	FALSE	canonical	3	81	junction_6	13.8473824241262	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAATGTAACATCATGCTT	26223882	True	NA	NA	False	AATAAA	-2	NA	26226385	26293508	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_26227277_26265169_26265316_26267515_26267624_26274662_26274825_26274930_26275054_26281970_26282061_26285881_26286500_26292245_26292382_26293425
transcript_94812.known	chr18	-	814	5	FSM	ENSG00000134504.14	ENST00000580191.5	814	5	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_4	8.55862138431185	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGCCTCTGGACTAAATG	-26657224	True	NA	NA	False	GATAAA	-3	NA	26657401	26455759	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_26455902_26459619_26459926_26476514_26476660_26501071_26501251_26657359
transcript_94813.known	chr18	-	2103	5	FSM	ENSG00000134504.14	ENST00000408011.7	2103	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	11.1130553854464	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCTGTGTGAAACACACAT	-26549190	True	NA	NA	False	AATAAA	-18	NA	26549435	26454973	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_26455902_26459619_26459926_26476514_26476660_26501071_26501251_26548890
transcript_94816.known	chr18	-	3448	5	FSM	ENSG00000134504.14	ENST00000580059.7	3448	5	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_4	15.4029218007494	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCCGTGTTGAGCATCAA	-26546850	True	NA	NA	False	ATTAAA	-23	NA	26548553	26454909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_26455902_26459619_26459926_26476514_26476660_26501071_26501251_26546727
transcript_94826.known	chr18	-	11379	6	FSM	ENSG00000154080.14	ENST00000618847.5	11379	6	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	70.4573629935154	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAGCCTGTGCATATTTC	-27181056	True	NA	-5	True	AATAAA	-23	NA	27185308	26906480	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_26917351_26944328_26944367_27024115_27024158_27048464_27048504_27142688_27142906_27185135
transcript_94837.known	chr18	-	2033	5	FSM	ENSG00000154080.14	ENST00000580774.2	2033	5	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	103.572438418722	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATTTTGGACTTAGGCA	-27181046	True	NA	-6	True	GATAAA	-13	NA	27185298	26915778	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_26917351_27024115_27024158_27048464_27048504_27142688_27142906_27185135
transcript_9484.known	chr1	+	2579	4	FSM	ENSG00000157184.7	ENST00000636239.1	2579	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	130.761870079418	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGTTTAAGCAGAAATAAAG	53191759	True	NA	-29	True	NA	NA	NA	53196799	53214160	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_53197096_53200718_53200800_53210014_53211320_53213263
transcript_94848.known	chr18	-	4016	16	FSM	ENSG00000170558.10	ENST00000269141.8	4016	16	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_11	10.1893190264228	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGTTTGAACTTTTTC	-28176192	True	NA	-3	True	AATAAA	-20	NA	28177130	27950965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_27952360_27963356_27963522_27982943_27983084_27984999_27985234_27985527_27985762_27988523_27988667_27990096_27990351_27992654_27992841_27993499_27993638_28002996_28003170_28005848_28005994_28009716_28009873_28011845_28011993_28013682_28013910_28147672_28147785_28176962
transcript_9485.known	chr1	+	2405	3	FSM	ENSG00000157184.7	ENST00000638135.1	2405	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	130.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAATAAAGTTTAATTTTT	53191862	True	NA	-19	True	NA	NA	NA	53196902	53214170	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_53197096_53210014_53211320_53213263
transcript_94850.known	chr18	-	12377	17	FSM	ENSG00000134755.18	ENST00000251081.8	12377	17	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	49.7062857569342	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTAATGGAATGTTCTTA	-31100015	True	NA	NA	False	ATTAAA	-16	NA	31102421	31058839	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_31068213_31068298_31068345_31068893_31069152_31070725_31070851_31071604_31071842_31074682_31074908_31079846_31079990_31080095_31080353_31082237_31082424_31082925_31083061_31086575_31086743_31087668_31087814_31089438_31089595_31091027_31091148_31092100_31092301_31093558_31093644_31101902
transcript_94854.known	chr18	-	12331	16	FSM	ENSG00000134755.18	ENST00000280904.11	12331	16	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	17.0351271071147	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTAATGGAATGTTCTTA	-31100015	True	NA	NA	False	ATTAAA	-16	NA	31102421	31058839	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_31068213_31068893_31069152_31070725_31070851_31071604_31071842_31074682_31074908_31079846_31079990_31080095_31080353_31082237_31082424_31082925_31083061_31086575_31086743_31087668_31087814_31089438_31089595_31091027_31091148_31092100_31092301_31093558_31093644_31101902
transcript_94860.nic	chr18	-	847	3	ISM	ENSG00000134755.18	ENST00000251081.8	12377	17	-72	33290	10	-26132	5prime_fragment	FALSE	canonical	3	197	junction_2	4.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTCTTTTTGGAGCAT	-31102476	False	NA	NA	False	AAGAAA	-10	NA	31102493	31092129	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_31092301_31093558_31093644_31101902
transcript_94863.known	chr18	+	5697	15	FSM	ENSG00000046604.14	ENST00000261590.13	5697	15	0	0	0	0	multi-exon	FALSE	canonical	3	483	junction_7	48.3121229557323	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCGGGGTACTTGGCAT	31494909	True	NA	27	True	AATAAA	-29	NA	31498176	31549008	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_31498297_31518238_31518275_31519802_31519938_31520802_31520965_31521098_31521244_31522082_31522250_31524447_31524586_31524702_31524889_31530986_31531253_31535269_31535413_31536201_31536430_31538750_31538979_31541192_31541315_31542519_31542853_31545720
transcript_9487.known	chr1	-	841	2	FSM	ENSG00000162384.14	ENST00000474227.1	841	2	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTAACCAAGCAGAGTGG	-53216476	True	NA	NA	False	NA	NA	NA	53220600	53219534	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_53220345_53220569
transcript_94873.nic	chr18	+	1162	7	ISM	ENSG00000046604.14	ENST00000261590.13	5697	15	-262	24426	-262	-787	5prime_fragment	FALSE	canonical	3	531	junction_6	41.1568814281268	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTAACTATTATTCTTCT	NA	False	NA	NA	False	AATAAA	-1	NA	31497914	31524582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_31498297_31518238_31518275_31519802_31519938_31520802_31520965_31521098_31521244_31522082_31522250_31524447
transcript_9488.known	chr1	-	490	1	FSM	ENSG00000162384.14	ENST00000602807.1	490	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCAGTCTTGGAAAGCTT	-53216452	True	NA	0	True	ATTAAA	-21	NA	53220576	53220086	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_53220100_53220600
transcript_94881.known	chr18	-	6230	29	FSM	ENSG00000153339.15	ENST00000283351.10	6230	29	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_17	26.3696253833296	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTCCTGAATATTACTC	-31936978	True	NA	NA	False	AATAAA	-20	NA	31943128	31829196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_31830990_31832083_31832174_31839311_31839458_31846715_31846818_31849565_31849740_31852445_31852505_31852594_31852664_31853848_31853946_31855659_31855808_31857539_31857983_31864626_31864782_31866848_31866976_31867401_31867477_31870371_31870503_31870925_31871121_31873429_31873539_31874479_31874705_31890734_31890867_31897785_31897892_31900924_31901026_31907459_31907611_31908302_31908419_31908753_31909011_31909666_31909761_31913368_31913523_31916271_31916447_31917577_31917668_31931328_31931524_31942607
transcript_9489.known	chr1	-	656	5	FSM	ENSG00000162385.11	ENST00000371470.8	656	5	0	0	0	0	multi-exon	FALSE	canonical	3	1069	junction_2	88.03550420143	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGAACTCTTCTCAATT	-53223547	True	NA	-16	True	AATAAA	-44	NA	53238518	53226899	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_53227145_53228871_53228955_53233541_53233653_53235576_53235636_53238360
transcript_94892.nic	chr18	-	3079	19	ISM	ENSG00000153339.15	ENST00000580104.5	5014	30	-30	34757	-30	5319	intron_retention	FALSE	canonical	3	151	junction_7	20.0468586868336	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGTTAAATATGGCCCT	-31943148	False	NA	NA	False	NA	NA	NA	31943166	31864694	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_31864782_31866848_31866976_31867401_31867477_31870371_31870503_31870925_31871121_31873429_31873539_31874479_31874705_31890734_31890867_31897785_31897892_31900924_31901026_31907459_31907611_31908302_31908419_31908753_31909011_31909666_31909761_31913368_31913523_31916271_31916447_31917577_31917668_31931328_31931524_31942607
transcript_94893.nnic	chr18	+	695	2	Antisense	novelGene_ENSG00000153339.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACTTTCTAATCAACAGA	31818508	True	NA	12	True	AATAAA	-16	NA	31819287	31829906	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr18_+_31819445_31829368
transcript_94895.nnic	chr18	+	2482	2	Antisense	novelGene_ENSG00000153339.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACATATATAGGTGTGTGT	31818508	True	NA	5	True	AATAAA	-28	NA	31819287	31831693	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr18_+_31819445_31829368
transcript_94897.known	chr18	-	7434	6	FSM	ENSG00000141441.16	ENST00000269209.7	7434	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	6.44980619863884	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTTGCAGTTGTTCCT	-32470302	True	NA	-1	True	AATAAA	-17	NA	32470882	32263521	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_32268769_32270216_32270384_32287030_32288204_32310192_32310324_32392894_32393036_32470307
transcript_94899.nnic	chr18	+	3521	9	NNC	ENSG00000134758.14	novel	3551	8	NA	NA	-21	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	181.282066129002	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTGTGTGTCTAATTAAA	32084697	True	NA	8	True	ATTAAA	-14	NA	32091852	32131559	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr18_+_32092236_32092699_32092887_32111753_32111920_32113744_32113861_32123517_32123575_32124733_32124846_32126692_32126801_32129118_32130977_32131025
transcript_94903.known	chr18	+	3551	8	FSM	ENSG00000134758.14	ENST00000261593.8	3551	8	0	0	0	0	multi-exon	FALSE	canonical	3	385	junction_1	63.9639566873567	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGTGTCTAATTAAAAT	32084718	True	NA	10	True	ATTAAA	-16	NA	32091873	32131561	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_32092236_32092699_32092887_32111753_32111920_32113744_32113861_32123517_32123575_32124733_32124846_32126692_32126801_32129118
transcript_94909.nnic	chr18	+	3173	8	NNC	ENSG00000134758.14	novel	3551	8	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	191.855494089288	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTGTGTGTCTAATTAAA	32090313	True	NA	8	True	ATTAAA	-14	NA	32092664	32131559	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr18_+_32092887_32111753_32111920_32113744_32113861_32123517_32123575_32124733_32124846_32126692_32126801_32129118_32130977_32131025
transcript_9491.known	chr1	-	500	4	FSM	ENSG00000162385.11	ENST00000371466.4	500	4	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_2	479.704307070744	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTATTATTTTATAAAGA	-53223528	True	NA	-42	True	AATAAA	-18	NA	53238499	53226925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_53227145_53228871_53228955_53235576_53235636_53238360
transcript_94919.nic	chr18	+	2435	7	ISM	ENSG00000134758.14	ENST00000261593.8	3551	8	734	846	-2	0	3prime_fragment	FALSE	canonical	3	491	junction_1	36.922215534824	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGCAGTTTTGTAAAAAC	32085452	False	NA	7	True	AATAAA	-15	NA	32092607	32130715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_32092887_32111753_32111920_32113744_32113861_32123517_32123575_32124733_32124846_32126692_32126801_32129118
transcript_94920.nic	chr18	+	2529	7	ISM	ENSG00000134758.14	ENST00000261593.8	3551	8	734	752	-2	94	3prime_fragment	FALSE	canonical	3	491	junction_1	36.922215534824	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATACGCCTTTGTTCTG	32085452	False	NA	6	True	AAGAAA	-17	NA	32092607	32130809	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_32092887_32111753_32111920_32113744_32113861_32123517_32123575_32124733_32124846_32126692_32126801_32129118
transcript_94922.known	chr18	+	5573	6	FSM	ENSG00000101695.9	ENST00000217740.4	5573	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	12.6712272491657	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGATTACTATTTTACTC	32018763	True	NA	42	True	ATTAAA	-31	NA	32018824	32073219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_32019028_32037115_32037270_32042178_32042274_32045641_32045733_32065901_32066010_32068297
transcript_94935.known	chr18	+	2071	5	FSM	ENSG00000134758.14	ENST00000257190.9	2071	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	229.18224189496	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGCAGTTTTGTAAAAAC	32090338	True	NA	7	True	AATAAA	-15	NA	32092689	32130715	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_32092887_32123517_32123575_32124733_32124846_32126692_32126801_32129118
transcript_94937.known	chr18	-	4271	9	FSM	ENSG00000197705.10	ENST00000359358.9	4271	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	7.39826837847885	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAACTGTCTCTCATATCC	NA	False	NA	-3	True	AATAAA	-16	NA	32773023	32672672	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_32674798_32677172_32677331_32680168_32680328_32680408_32680600_32687154_32687234_32695462_32695553_32741927_32742050_32769644_32770635_32772666
transcript_94940.known	chr18	-	1930	10	FSM	ENSG00000101746.16	ENST00000590712.5	1930	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.34256066373273	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGCATAAAAGGCTATCTA	-34223116	False	NA	NA	False	CATAAA	-6	NA	34223205	33852588	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_33853036_33883243_33883425_33943064_33943179_33958238_33958419_34019317_34019602_34093464_34093598_34104046_34104160_34105048_34105161_34129870_34130021_34222989
transcript_94941.known	chr18	+	3353	22	FSM	ENSG00000134769.23	ENST00000684359.1	3353	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	16.8943629987575	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTGTTGGAACCTC	34492179	True	NA	-63	True	NA	NA	NA	34493360	34891280	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_34493515_34679467_34679593_34755975_34756044_34765960_34766042_34794036_34794251_34806218_34806305_34811958_34812114_34815908_34816015_34818163_34818331_34820790_34820916_34825266_34825276_34827592_34827677_34848295_34848384_34851830_34851929_34858284_34858399_34863965_34864063_34875238_34875399_34877718_34877809_34879550_34879720_34882068_34882202_34884727_34884777_34890299
transcript_94946.known	chr18	+	2671	17	FSM	ENSG00000134769.23	ENST00000598774.6	2671	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	17.4936372361496	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACAAATTAAA	34492149	True	NA	NA	False	NA	NA	NA	34493330	34866980	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_34493515_34679467_34679593_34755975_34756044_34765960_34766042_34794036_34794251_34806218_34806305_34811958_34812114_34815908_34816015_34818163_34818331_34820790_34820916_34825266_34825276_34827592_34827677_34848295_34848384_34851830_34851929_34858284_34858399_34863965_34864063_34866110
transcript_94950.nic	chr18	+	2866	17	NIC	ENSG00000134769.23	novel	3167	19	NA	NA	213	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	18.9567764928534	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACAAATTAAA	34493632	False	NA	NA	False	NA	NA	NA	34493642	34866980	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_+_34494022_34679467_34679593_34755975_34756044_34765960_34766042_34794036_34794251_34806218_34806305_34811958_34812114_34815908_34816015_34818163_34818331_34820790_34820916_34825266_34825276_34827592_34827677_34848295_34848384_34851830_34851929_34858284_34858399_34863965_34864063_34866110
transcript_94953.known	chr18	+	1706	13	FSM	ENSG00000134769.23	ENST00000315456.10	1706	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	18.1266761677062	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTCTCTGAGTGGGCCT	34492135	True	NA	10	True	AATAAA	-20	NA	34493316	34829328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_34493515_34679467_34679593_34755975_34756044_34765960_34766042_34794036_34794251_34806218_34806305_34811958_34812114_34815908_34816015_34818163_34818331_34820790_34820916_34825266_34825276_34827592_34827677_34829040
transcript_94954.known	chr18	+	4173	8	FSM	ENSG00000166974.13	ENST00000413393.5	4173	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	152.826565700056	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTGCCTGGAGTTACA	NA	False	NA	13	True	AATAAA	-17	NA	34976927	35143466	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_34977080_35005491_35005554_35070194_35070323_35097445_35097592_35101945_35102160_35126947_35127088_35132031_35132191_35140294
transcript_94955.known	chr18	+	4212	7	FSM	ENSG00000166974.13	ENST00000300249.10	4212	7	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_3	24.9844396019247	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCTGGAGTTACAGATT	35038199	True	NA	17	True	AATAAA	-21	NA	35041412	35143470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_35041662_35070194_35070323_35097445_35097592_35101945_35102160_35126947_35127088_35132031_35132191_35140294
transcript_9496.known	chr1	-	3322	18	FSM	ENSG00000157193.18	ENST00000371454.6	3322	18	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_14	85.8247590929121	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTCAACTCCCTCCCCC	-53324812	True	NA	69	True	AGTAAA	-13	NA	53328054	53246552	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_53247057_53250689_53250863_53255116_53255186_53257239_53257465_53258318_53258472_53260463_53260606_53262067_53262208_53262445_53262565_53264168_53264397_53266472_53266648_53271027_53271154_53271226_53271347_53275630_53275754_53276691_53277079_53280586_53280716_53289566_53289690_53326872_53326993_53327788
transcript_94963.nic	chr18	+	2136	4	NIC	ENSG00000186812.13	novel	5259	4	NA	NA	0	2623	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	16.7531091641721	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGACCCAATAAAGAACAGT	35236485	True	NA	NA	False	ACTAAA	-14	NA	35241033	35246723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_+_35241072_35242390_35242885_35243151_35243294_35245261
transcript_94964.known	chr18	+	5259	4	FSM	ENSG00000186812.13	ENST00000330501.12	5259	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	10.6144555520604	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTATACTGGTTATGTGT	35236485	True	NA	NA	False	ATTAAA	-18	NA	35241033	35249808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_35241110_35242390_35242885_35243151_35243294_35245261
transcript_94966.nic	chr18	+	2755	4	NIC	ENSG00000186812.13	novel	5259	4	NA	NA	0	2623	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	12.0369800568452	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGACCCAATAAAGAACAGT	35236485	True	NA	NA	False	ACTAAA	-14	NA	35241033	35246723	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_+_35241691_35242390_35242885_35243151_35243294_35245261
transcript_94968.known	chr18	-	4122	4	FSM	ENSG00000186814.14	ENST00000333206.10	4122	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	18.2391520270726	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGCTTTGAAATTATTCA	-35289520	True	NA	-4	True	AATAAA	-16	NA	35290229	35251061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_35254382_35263512_35263658_35263944_35264456_35290083
transcript_94971.known	chr18	-	3368	4	FSM	ENSG00000186814.14	ENST00000589178.5	3368	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	22.1058061754523	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATATATAAAAAATAG	-35289488	True	NA	NA	False	NA	NA	NA	35290197	35260642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_35263241_35263512_35263658_35263944_35264456_35290083
transcript_94975.known	chr18	+	1516	3	FSM	ENSG00000186812.13	ENST00000591206.5	1516	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	11.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCCACAGTGTATTCAAT	35236488	True	NA	3	True	ATTAAA	-17	NA	35241036	35244100	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_35241110_35242390_35242885_35243151
transcript_94977.known	chr18	+	2046	3	FSM	ENSG00000186812.13	ENST00000585800.1	2046	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	14	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGTCCTATTAAAGACTG	35236508	True	NA	-28	True	NA	NA	NA	35241056	35244069	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_35241691_35242390_35242885_35243151
transcript_94979.known	chr18	-	4323	5	FSM	ENSG00000186814.14	ENST00000420878.7	4323	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	18.6061145863396	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAGTTTGCTTTGAAAT	-35289523	True	NA	-10	True	AATAAA	-10	NA	35290232	35251067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_35254382_35263512_35263658_35263944_35264456_35267475_35267680_35290083
transcript_94980.known	chr18	+	5124	3	FSM	ENSG00000257267.4	ENST00000399070.3	5124	3	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	77	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTACTGGTTCCTGTTGAA	35287642	True	NA	17	True	AATAAA	-17	NA	35290281	35310766	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_35290392_35291009_35291233_35305975
transcript_94986.known	chr18	+	2191	2	FSM	ENSG00000257267.4	ENST00000638208.2	2233	2	42	0	12	0	multi-exon	FALSE	canonical	3	84	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAACCACC	35287696	True	NA	NA	False	NA	NA	NA	35290335	35308110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_35290392_35305975
transcript_9499.known	chr1	-	3770	17	FSM	ENSG00000157193.18	ENST00000668071.1	3770	17	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_13	43.6369521592652	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGTATAGATGTTCTTC	-53327860	False	NA	-10	True	AATAAA	-16	NA	53327883	53245546	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_53247057_53250689_53250863_53255116_53255186_53257239_53257465_53258318_53258472_53260463_53260606_53262067_53262208_53262445_53262565_53264168_53264397_53266472_53266648_53271027_53271154_53271226_53271347_53275630_53275754_53280586_53280716_53289566_53289690_53326872_53326993_53327788
transcript_94990.known	chr18	-	6282	4	FSM	ENSG00000172466.16	ENST00000399061.3	6282	4	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_3	16.1314048434171	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCTGTGTCAACTTTT	-35339158	True	NA	-20	True	AATAAA	-21	NA	35344456	35332226	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_35337771_35339828_35339977_35340230_35340734_35344369
transcript_94993.known	chr18	-	3661	4	FSM	ENSG00000186496.12	ENST00000589332.7	3661	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	2.49443825784929	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTATTGTTTTCTGGCTT	-35377268	True	NA	NA	False	AGTAAA	-16	NA	35377337	35366693	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_35369661_35373455_35373601_35373875_35374365_35377277
transcript_94997.known	chr18	-	904	7	FSM	ENSG00000153391.16	ENST00000441607.6	904	7	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_5	145.313071982148	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTAGTGTG	-35494563	True	NA	0	True	NA	NA	NA	35497943	35468462	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_35468743_35478281_35478350_35479299_35479412_35480452_35480564_35487385_35487440_35489331_35489386_35497718
transcript_95.known	SIRV2	-	686	5	FSM	SIRV2A	SIRV203	686	5	0	0	0	0	multi-exon	FALSE	canonical	3	2395	junction_4	277.837519964457	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTGACGTGGACGTTTC	NA	False	NA	NA	False	NA	NA	NA	5895	3665	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV2_-_3826_3966_4095_4338_4480_4687_4801_5751
transcript_95001.known	chr18	-	408	5	FSM	ENSG00000153391.16	ENST00000591139.1	408	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	121.48328074266	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAGCACCATTGAAGAGT	-35487083	False	NA	NA	False	NA	NA	NA	35487470	35468710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_35468743_35478281_35478350_35479299_35479412_35480452_35480564_35487385
transcript_95002.known	chr18	-	943	5	FSM	ENSG00000153391.16	ENST00000334598.12	943	5	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_1	17.0055138117024	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAAGTCCCTGAATTTTT	-35494580	True	NA	-7	True	AATAAA	-18	NA	35497960	35468332	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_35468743_35478281_35478350_35479299_35479412_35480452_35480564_35497718
transcript_95006.known	chr18	-	455	3	FSM	ENSG00000267140.1	ENST00000589258.1	455	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	7.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCAGTCTATGGTATTTT	-35494560	True	NA	-2	True	AATAAA	-17	NA	35497940	35443870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_35444023_35446874_35446956_35497718
transcript_95007.known	chr18	-	382	3	FSM	ENSG00000153391.16	ENST00000587450.1	382	3	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_2	136	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTGACGTCGTCACCGG	-35494580	True	NA	NA	False	NA	NA	NA	35497960	35468670	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_35468743_35478281_35478350_35497718
transcript_95008.known	chr18	-	595	2	FSM	ENSG00000153391.16	ENST00000590757.1	595	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCAAGTCCCTGAATTTT	-35494524	True	NA	-8	True	AATAAA	-17	NA	35497904	35468333	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_35468743_35497718
transcript_95009.known	chr18	+	3970	12	FSM	ENSG00000141429.14	ENST00000269195.6	3970	12	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	85.9333780003175	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGCCTTACATTGGTTT	35581641	False	NA	29	True	ATTAAA	-42	NA	35581739	35711834	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_35581863_35654559_35654802_35663627_35663803_35677590_35677758_35683390_35683599_35687015_35687187_35689172_35689291_35691011_35691193_35692180_35692321_35702896_35702996_35703508_35703644_35709623
transcript_95014.known	chr18	+	985	5	FSM	ENSG00000141428.17	ENST00000592875.6	985	5	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_2	30.1122898498271	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGGCATTACTGTTTTT	35968984	True	NA	8	True	TATAAA	-19	NA	35972678	35979278	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_35972806_35972884_35972908_35974895_35975096_35977409_35977601_35978834
transcript_95019.known	chr18	+	703	4	FSM	ENSG00000141428.17	ENST00000269194.10	703	4	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_1	137.211110661232	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAAGATTCCAAAGGTGG	35968939	True	NA	NA	False	ACTAAA	-25	NA	35972633	35978939	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_35972841_35974895_35975096_35977409_35977601_35978834
transcript_95023.nic	chr18	+	318	3	ISM	ENSG00000141428.17	ENST00000592875.6	985	5	-3	4218	-3	1412	5prime_fragment	FALSE	canonical	3	280	junction_2	3	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGTGAAAAAGTTCAAAGAC	35968981	True	NA	NA	False	TTTAAA	-11	NA	35972675	35975060	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_35972806_35972884_35972908_35974895
transcript_95024.known	chr18	-	1850	8	FSM	ENSG00000141425.18	ENST00000357384.8	1850	8	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	201.244596834554	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGTATCTGATGACAGTA	-36052794	True	NA	-63	True	NA	NA	NA	36067556	35989885	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_35990596_35993101_35993301_36026899_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36067253
transcript_95025.known	chr18	-	1264	8	FSM	ENSG00000141425.18	ENST00000588737.5	1264	8	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_6	256.842761396214	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAACAACGAGTAATTTATA	-36052797	True	NA	NA	False	AAGAAA	-12	NA	36067559	35993039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_35993301_36026899_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36040806_36040866_36067253
transcript_95027.known	chr18	-	4421	7	FSM	ENSG00000141425.18	ENST00000399022.9	4421	7	0	0	0	0	multi-exon	FALSE	canonical	3	483	junction_1	77.6410902093015	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTGTTTTGTGAATCTG	-36052797	True	NA	-1	True	AATAAA	-25	NA	36067559	35989823	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_35993301_36026899_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36067253
transcript_95030.known	chr18	-	1022	7	FSM	ENSG00000141425.18	ENST00000589050.1	1022	7	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_1	237.753665703719	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGTATTGTCTCATGT	-36052795	True	NA	-7	True	AATAAA	-13	NA	36067557	36025598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_36025679_36026899_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36067253
transcript_95033.nic	chr18	-	2311	7	ISM	ENSG00000141425.18	ENST00000588737.5	1264	8	-7	32559	-7	0	5prime_fragment	FALSE	canonical	3	75	junction_5	277.339993910403	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGTATTGTCTCATGT	-36052804	True	NA	-7	True	AATAAA	-13	NA	36067566	36025598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36040806_36040866_36067253
transcript_95035.nic	chr18	-	3563	6	ISM	ENSG00000141425.18	ENST00000357384.8	1850	8	-36	34428	-16	575	5prime_fragment	FALSE	canonical	3	577	junction_5	54.5688555863141	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACCAGGTGTGGTGGTGG	-36052830	True	NA	NA	False	NA	NA	NA	36067592	36024313	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36067253
transcript_95036.nic	chr18	-	2278	6	ISM	ENSG00000141425.18	ENST00000357384.8	1850	8	-36	35713	-16	0	5prime_fragment	FALSE	canonical	3	577	junction_5	54.5688555863141	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGTATTGTCTCATGT	-36052830	True	NA	-7	True	AATAAA	-13	NA	36067592	36025598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36067253
transcript_95040.known	chr18	-	3003	10	FSM	ENSG00000141424.13	ENST00000590986.5	3003	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_9	73.3572351620294	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGAATTGGGGAGGCAT	-36122842	True	NA	NA	False	AATAAA	-17	NA	36129381	36109147	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_36109746_36111058_36111250_36112500_36112582_36114096_36114475_36116673_36116780_36122051_36122271_36123494_36123665_36124519_36124701_36126218_36127017_36129100
transcript_95043.nic	chr18	-	2822	9	NIC	ENSG00000141424.13	novel	3566	10	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_8	81.087048133472	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCAGATGTCTGGTTTTCT	-36122855	True	NA	-1	True	AATAAA	-19	NA	36129394	36108530	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_36109746_36111058_36111250_36112500_36112582_36114096_36114475_36116673_36116780_36122051_36122271_36123494_36123665_36124519_36124701_36129113
transcript_9505.known	chr1	-	2553	16	FSM	ENSG00000157193.18	ENST00000354412.7	2553	16	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	82.7364221824678	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACACT	-53327889	False	NA	54	True	NA	NA	NA	53327912	53246567	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_53247057_53250689_53250863_53255116_53255186_53258318_53258472_53260463_53260606_53262067_53262208_53262445_53262565_53264168_53264397_53266472_53266648_53271027_53271154_53271226_53271347_53275630_53275754_53280586_53280716_53289566_53289690_53326872_53326993_53327788
transcript_95050.nic	chr18	-	1648	5	ISM	ENSG00000141424.13	ENST00000269187.10	3566	10	-54	13522	-9	-10997	5prime_fragment	FALSE	canonical	3	173	junction_3	29.6352830254749	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGTAAGAAAAAGTATACCGA	-36122855	True	NA	14	True	AAGAAA	-3	NA	36129394	36122052	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_36122271_36123494_36123665_36124519_36124701_36126218_36127017_36129113
transcript_95052.known	chr18	-	1657	8	FSM	ENSG00000141424.13	ENST00000440549.6	1657	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	84.8323677156597	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAAGCCTCATTTTTTTT	-36122846	True	NA	-2	True	AATAAA	-16	NA	36129385	36110999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_36111250_36112500_36112582_36114096_36114475_36116673_36116780_36122051_36122271_36123494_36123665_36124519_36124701_36129113
transcript_95053.nnic	chr18	-	1257	2	FSM	ENSG00000288917.1	ENST00000690777.1	909	2	-67	-281	-67	281	multi-exon	FALSE	canonical	3	19	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTATACATGTATTTGA	-36122868	True	NA	NA	False	TTTAAA	-8	NA	36129407	36127764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_36128728_36129113
transcript_95056.known	chr18	+	2722	23	FSM	ENSG00000134759.14	ENST00000442325.6	2722	23	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	157.084128904606	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACATGCTTGCAGTCAC	36123873	True	NA	17	True	AATAAA	-23	NA	36129897	36174651	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_36130072_36133237_36133317_36136306_36136378_36138269_36138427_36138794_36138873_36139418_36139614_36141136_36141202_36142280_36142348_36142825_36142967_36144938_36145035_36145947_36146049_36146249_36146382_36154849_36155000_36156465_36156655_36158834_36158905_36159734_36159831_36159957_36160016_36160931_36161005_36164474_36164668_36167100_36167223_36170062_36170197_36171046_36171161_36174484
transcript_95062.known	chr18	+	8432	22	FSM	ENSG00000134759.14	ENST00000358232.11	8432	22	0	0	0	0	multi-exon	FALSE	canonical	3	461	junction_5	49.7146962216221	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCCTTTGGTAAACCCC	36123874	True	NA	8	True	AATAAA	-22	NA	36129898	36180557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_36130072_36133237_36133317_36136306_36136378_36138269_36138427_36138794_36138873_36141136_36141202_36142280_36142348_36142825_36142967_36144938_36145035_36145947_36146049_36146249_36146382_36154849_36155000_36156465_36156655_36158834_36158905_36159734_36159831_36159957_36160016_36160931_36161005_36164474_36164668_36167100_36167223_36170062_36170197_36171046_36171161_36174484
transcript_95064.known	chr18	+	2542	22	FSM	ENSG00000134759.14	ENST00000539560.5	2542	22	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_18	121.659015694577	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTGAGTTTCTGGGTTT	36123876	True	NA	27	True	NA	NA	NA	36129900	36174721	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_36130072_36133237_36133317_36136306_36136378_36138269_36138427_36138794_36138873_36141136_36141202_36142280_36142348_36142825_36142967_36144938_36145035_36145947_36146049_36146249_36146382_36154849_36155000_36156465_36156655_36158834_36158905_36159734_36159831_36159957_36160016_36160931_36161005_36164474_36164668_36167152_36167223_36170062_36170197_36171046_36171161_36174484
transcript_95074.known	chr18	+	2453	21	FSM	ENSG00000134759.14	ENST00000351393.10	2453	21	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	123.868428180873	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACTACATGCTTGCAGT	36123866	True	NA	14	True	AATAAA	-20	NA	36129890	36174648	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_36130072_36133237_36133317_36136306_36136378_36138269_36138427_36141136_36141202_36142280_36142348_36142825_36142967_36144938_36145035_36145947_36146049_36146249_36146382_36154849_36155000_36156465_36156655_36158834_36158905_36159734_36159831_36159957_36160016_36160931_36161005_36164474_36164668_36167100_36167223_36170062_36170197_36171046_36171161_36174484
transcript_95079.nic	chr18	+	2611	18	ISM	ENSG00000134759.14	ENST00000539560.5	2542	22	-2	9432	0	64	5prime_fragment	FALSE	canonical	3	461	junction_5	46.3521946789696	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGACTAAAAACCTTTGTG	36123874	True	NA	NA	False	CATAAA	-17	NA	36129898	36165289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_36130072_36133237_36133317_36136306_36136378_36138269_36138427_36138794_36138873_36141136_36141202_36142280_36142348_36142825_36142967_36144938_36145035_36145947_36146049_36146249_36146382_36154849_36155000_36156465_36156655_36158834_36158905_36159734_36159831_36159957_36160016_36160931_36161005_36164474
transcript_95087.nic	chr18	+	812	8	ISM	ENSG00000134759.14	ENST00000539560.5	2542	22	-2	31774	0	0	5prime_fragment	FALSE	canonical	3	461	junction_5	36.6895414114103	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTACCATAGAAAATGAAAG	36123874	True	NA	NA	False	AAGAAA	-6	NA	36129898	36142947	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_36130072_36133237_36133317_36136306_36136378_36138269_36138427_36138794_36138873_36141136_36141202_36142280_36142348_36142825
transcript_95088.known	chr18	+	583	3	FSM	ENSG00000134759.14	ENST00000541190.5	583	3	0	0	0	0	multi-exon	FALSE	canonical	3	560	junction_2	11	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTAAGTTTTTTTCT	36123869	True	NA	NA	False	NA	NA	NA	36129893	36136632	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_36130072_36133237_36133317_36136306
transcript_95089.known	chr18	-	609	2	FSM	ENSG00000260552.2	ENST00000568654.2	620	2	11	0	2	0	multi-exon	FALSE	canonical	2	16	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACAATTTTTTTTCACA	-36187346	True	NA	NA	False	AATAAA	-30	NA	36187448	36179995	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_36180391_36187234
transcript_95090.known	chr18	+	6182	15	FSM	ENSG00000075643.6	ENST00000261326.6	6182	15	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	6.61669194121186	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCAATTTTCTTTGCTTTG	36185725	True	NA	18	True	ATTAAA	-19	NA	36187496	36272157	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_36187682_36195256_36195347_36198689_36198757_36199682_36200325_36203112_36203190_36205076_36205277_36213365_36213483_36215515_36215978_36220054_36220218_36248921_36249001_36251158_36251284_36256967_36257074_36260036_36260176_36266748_36266854_36268532
transcript_95097.known	chr18	+	4967	25	FSM	ENSG00000134775.16	ENST00000257209.8	4967	25	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_10	2.56580071972344	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATGAGAAACTTTTATTC	36297333	True	NA	1	True	AATAAA	-15	NA	36297713	36780055	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_36298001_36355538_36355646_36372679_36372745_36501931_36502000_36512437_36512544_36576450_36576546_36594786_36594899_36602673_36602769_36611951_36612096_36625510_36625750_36658074_36658189_36681435_36681571_36687127_36687179_36693208_36693424_36709094_36709392_36717831_36718716_36730645_36730805_36740655_36740839_36742736_36742857_36744031_36744194_36746944_36747136_36755118_36755312_36760607_36760783_36769264_36769427_36779447
transcript_9510.nic	chr1	-	2434	4	ISM	ENSG00000157193.18	ENST00000655704.1	2819	18	-185	29420	169	10416	5prime_fragment	FALSE	canonical	3	38	junction_3	150.298222063854	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCGGGCGTGGTGGCTA	-53327625	False	NA	NA	False	AATACA	-17	NA	53327648	53278915	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_53280716_53289566_53289690_53326872_53326993_53327257
transcript_95104.known	chr18	+	4853	10	FSM	ENSG00000150477.15	ENST00000280020.10	4853	10	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_7	15.4488403016753	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGGTTTGATATTGAATT	36827560	True	NA	12	True	AATAAA	-25	NA	36829126	37225334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_36829197_36834319_36834356_36835233_36835377_36844207_36844303_36885556_36885673_36959307_36959436_37066889_37067546_37160199_37160382_37172972_37173082_37222016
transcript_95109.known	chr18	+	1190	5	FSM	ENSG00000150477.15	ENST00000592521.5	1190	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	2.8613807855649	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGATGTTGTAATTGGTA	36827562	True	NA	NA	False	ATTAAA	-19	NA	36829128	36886404	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_36829197_36834319_36834356_36835233_36835377_36844207_36844303_36885556
transcript_95113.known	chr18	-	1268	7	FSM	ENSG00000134779.15	ENST00000614939.4	1268	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	379.520750420843	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGGTGTACATGTATG	NA	False	NA	0	True	AATAAA	-43	NA	36829216	36780026	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_36780189_36798448_36798610_36800197_36800312_36805373_36805503_36807846_36807935_36818893_36818974_36828682
transcript_95116.known	chr18	-	1239	7	FSM	ENSG00000134779.15	ENST00000590842.5	1239	7	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	329.843734045212	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAGCCAAGGGTTAAGTC	-36828774	False	NA	-4	True	AATAAA	-16	NA	36828842	36786572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_36787080_36798448_36798610_36800197_36800312_36805373_36805503_36807846_36807935_36818893_36818974_36828682
transcript_95117.known	chr18	-	3835	7	FSM	ENSG00000134779.15	ENST00000334295.9	3835	7	0	0	0	0	multi-exon	FALSE	canonical	3	880	junction_1	91.5600895587155	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATGCATTTTACTATTC	-36825170	True	NA	-14	True	ACTAAA	-20	NA	36829002	36794107	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_36797051_36798448_36798610_36800197_36800312_36805373_36805503_36807846_36807935_36818893_36818974_36828682
transcript_9512.known	chr1	-	2531	1	FSM	ENSG00000236253.7	ENST00000566100.1	2531	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTTTGAATGAGATGGAA	NA	False	NA	NA	False	AATAAA	-15	NA	53439565	53437034	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_53437000_53439600
transcript_95121.known	chr18	-	1102	6	FSM	ENSG00000134779.15	ENST00000589049.5	1102	6	0	0	0	0	multi-exon	FALSE	canonical	3	929	junction_1	76.8749634146254	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGGTGTTCCTTTTTTC	-36823822	True	NA	-21	True	CATAAA	-14	NA	36828781	36798017	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_36798610_36800197_36800312_36805373_36805503_36807846_36807935_36818893_36818974_36828682
transcript_95122.known	chr18	-	1726	6	FSM	ENSG00000134779.15	ENST00000383056.7	1726	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	403.702068362301	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCCAGTGAAGTTTCTT	-36828918	False	NA	-26	True	TATAAA	-17	NA	36828986	36796071	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_36797051_36798448_36798610_36800197_36800312_36807846_36807935_36818893_36818974_36828682
transcript_9513.known	chr1	+	1910	4	FSM	ENSG00000143006.7	ENST00000371445.3	1910	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTGGAAGGCTTATTC	NA	False	NA	NA	False	AATAAA	-15	NA	53459398	53467488	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_53460031_53461472_53461646_53464636_53464848_53466594
transcript_95150.known	chr18	+	9415	25	FSM	ENSG00000078142.14	ENST00000262039.9	9415	25	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_11	17.5639703813106	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATGTTTTAATTTCAATA	41952088	True	NA	NA	False	AATAAA	-20	NA	41955233	42087830	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_41955360_41957569_41957759_41962488_41962633_41970326_41970457_41987811_41987899_41990458_41990555_41993269_41993342_41995889_41995995_41996637_41996731_42004355_42004542_42013441_42013597_42015475_42015567_42020637_42020706_42027442_42027549_42029324_42029442_42033825_42033958_42037691_42037821_42038780_42038851_42040676_42040742_42043732_42043818_42049530_42049606_42057882_42058052_42064739_42064831_42067387_42067514_42081122
transcript_95153.known	chr18	+	9206	24	FSM	ENSG00000078142.14	ENST00000398870.7	9206	24	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	31.0198424209171	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATGTTTTAATTTCAATA	41952108	True	NA	NA	False	AATAAA	-20	NA	41955253	42087830	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_41955360_41962488_41962633_41970326_41970457_41987811_41987899_41990458_41990555_41993269_41993342_41995889_41995995_41996637_41996731_42004355_42004542_42013441_42013597_42015475_42015567_42020637_42020706_42027442_42027549_42029324_42029442_42033825_42033958_42037691_42037821_42038780_42038851_42040676_42040742_42043732_42043818_42049530_42049606_42057882_42058052_42064739_42064831_42067387_42067514_42081122
transcript_95161.nic	chr18	+	1770	15	ISM	ENSG00000078142.14	ENST00000262039.9	9415	25	-25	58409	-25	-8396	5prime_fragment	TRUE	canonical	3	93	junction_11	14.2336551446039	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGGAAATCGTAAGAAAAAG	41952063	True	NA	5	True	AATGAA	-18	NA	41955208	42029421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_41955360_41957569_41957759_41962488_41962633_41970326_41970457_41987811_41987899_41990458_41990555_41993269_41993342_41995889_41995995_41996637_41996731_42004355_42004542_42013441_42013597_42015475_42015567_42020637_42020706_42027442_42027549_42029324
transcript_95162.known	chr18	-	3936	4	FSM	ENSG00000132872.12	ENST00000255224.8	3936	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	3.39934634239519	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTTTCAATGCAGACTTT	-43277465	False	NA	-25	True	AATAAA	-18	NA	43277490	43267891	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_43270649_43271711_43271833_43273579_43274395_43277247
transcript_95163.known	chr18	+	6280	6	FSM	ENSG00000152217.20	ENST00000677068.1	6280	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.85472369909914	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGGA	44679956	False	NA	NA	False	NA	NA	NA	44680188	45064808	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_44680396_44701174_44701833_44869229_44869284_44949880_44953341_45038484_45038656_45063078
transcript_95166.known	chr18	-	3000	15	FSM	ENSG00000152229.18	ENST00000409746.5	3000	15	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_7	4.26662414944802	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTCGTATTTTTGTGT	-46071925	True	NA	-12	True	AATAAA	-20	NA	46072260	45983535	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_45985451_45988701_45988760_45990721_45990757_45991901_45991984_45992105_45992203_45993604_45993704_45997748_45997829_45998793_45998840_45999435_45999535_46005468_46005532_46011180_46011288_46015902_46015938_46024608_46024687_46039946_46040048_46072155
transcript_95171.known	chr18	-	859	5	FSM	ENSG00000152229.18	ENST00000587042.1	859	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	3.46410161513775	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTACTCTACTGTACAAAT	-46071937	True	NA	NA	False	NA	NA	NA	46072272	46010759	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_46011288_46015902_46015938_46024608_46024687_46039946_46040048_46072155
transcript_95175.known	chr18	-	1931	12	FSM	ENSG00000152234.16	ENST00000590156.5	1931	12	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_10	2100.04038135122	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTTGTTTTCTGTCATTT	-46055830	True	NA	-16	True	AATAAA	-14	NA	46098295	46084149	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_46084364_46084503_46084655_46086112_46086258_46086386_46086495_46087007_46087233_46087340_46087493_46088108_46088258_46089565_46089733_46089822_46089997_46091681_46091852_46094979_46095132_46098171
transcript_95176.known	chr18	-	2214	12	FSM	ENSG00000152234.16	ENST00000586592.5	2214	12	0	0	0	0	multi-exon	FALSE	canonical	2	147	junction_11	2046.57532526498	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTTGTTTTCTGTCATTT	-46055850	True	NA	-16	True	AATAAA	-14	NA	46098315	46084149	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_46084364_46084503_46084655_46086112_46086258_46086386_46086495_46087007_46087233_46087340_46087493_46088108_46088258_46089565_46089733_46089822_46089997_46091681_46091852_46095052_46095132_46097835
transcript_95177.known	chr18	-	5761	12	FSM	ENSG00000152234.16	ENST00000398752.11	5761	12	0	0	0	0	multi-exon	FALSE	canonical	3	6514	junction_8	390.106130929046	3201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTGTCTTTTTTGCTCT	-46055831	True	NA	2	True	TTTAAA	-20	NA	46098296	46080247	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_46084364_46084503_46084655_46086112_46086258_46086386_46086495_46087007_46087233_46087340_46087493_46088108_46088258_46089565_46089733_46089822_46089997_46091681_46091852_46095052_46095132_46098171
transcript_9518.known	chr1	-	4552	18	FSM	ENSG00000058804.12	ENST00000371429.4	4552	18	0	0	0	0	multi-exon	TRUE	canonical	3	503	junction_9	46.8326180951595	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAACAGTTAATTGAAATA	-53832168	True	NA	-22	True	AATAAA	-18	NA	53838296	53765477	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_53768034_53772328_53772490_53787157_53787259_53789132_53789197_53793228_53793280_53796688_53796805_53796898_53797145_53800692_53800849_53803927_53804010_53806424_53806518_53807655_53807792_53809694_53809747_53818970_53819080_53825797_53825937_53827998_53828174_53832489_53832592_53835499_53835621_53838204
transcript_95200.known	chr18	+	1072	9	FSM	ENSG00000152240.13	ENST00000282058.11	1072	9	0	0	0	0	multi-exon	FALSE	canonical	3	983	junction_4	64.3229158232119	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTTTCTGTGTGGTTGG	46095975	True	NA	25	True	ATTAAA	-16	NA	46104384	46128333	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_46104442_46105193_46105369_46118180_46118317_46119925_46120061_46122466_46122591_46123298_46123365_46124821_46124894_46125743_46125792_46128074
transcript_95203.known	chr18	+	1098	9	FSM	ENSG00000152240.13	ENST00000591715.5	1098	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	365.02754604961	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTTTGTTTCTGTGTGGT	46095986	True	NA	22	True	ATTAAA	-13	NA	46104395	46128330	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_46104442_46105193_46105409_46118180_46118317_46119925_46120061_46122466_46122591_46123298_46123365_46124821_46124894_46125743_46125792_46128074
transcript_95211.known	chr18	+	616	7	FSM	ENSG00000152240.13	ENST00000589554.5	616	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	419.201787793049	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGACTTTACAGAGTTCTT	46095996	True	NA	58	True	AATAAA	-30	NA	46104405	46128169	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_46104442_46105193_46105369_46122466_46122591_46123298_46123365_46124821_46124894_46125743_46125792_46128074
transcript_95213.known	chr18	+	506	6	FSM	ENSG00000152240.13	ENST00000585518.5	506	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	438.021734620555	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGTTCTTTTTCCTCTTG	46095992	True	NA	68	True	AATAAA	-40	NA	46104401	46128179	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_46104442_46105193_46105369_46123298_46123365_46124821_46124894_46125743_46125792_46128074
transcript_95214.nic	chr18	+	534	4	ISM	ENSG00000152240.13	ENST00000282058.11	1072	9	-70	8312	-63	60	5prime_fragment	FALSE	canonical	3	1019	junction_3	60.312150977689	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAACTGCAACTTTAGTAT	46095905	True	NA	17	True	AAGAAA	-32	NA	46104314	46120021	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_46104442_46105193_46105369_46118180_46118317_46119925
transcript_95216.known	chr18	+	5456	5	FSM	ENSG00000152242.11	ENST00000615052.5	5456	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	54.8497948947852	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTCTGAGGTTTTTTTT	46171806	True	NA	26	True	AATAAA	-23	NA	46174033	46266992	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_46174331_46215810_46216596_46240004_46240188_46253696_46253824_46262928
transcript_95218.known	chr18	+	5264	4	FSM	ENSG00000152242.11	ENST00000619301.4	5264	4	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	14.522013940528	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAATGATATCTTCTGAG	46171806	True	NA	17	True	AATAAA	-14	NA	46174033	46266983	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_46174331_46215810_46216596_46253696_46253824_46262928
transcript_95223.known	chr18	+	3744	2	FSM	ENSG00000152242.11	ENST00000619230.1	3744	2	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTATCGGCACTAGATCAT	46173984	False	NA	NA	False	TTTAAA	-26	NA	46174018	46219242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_46174331_46215810
transcript_95225.nnic	chr18	-	345	2	Antisense	novelGene_ENSG00000141622.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	72	junction_1	0	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTCTGCCTGACTGCAA	-46433433	True	NA	NA	False	AATAAA	-29	NA	46433576	46429219	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	Antisense_chr18_-_46429415_46433426
transcript_95228.known	chr18	-	13761	8	FSM	ENSG00000101638.14	ENST00000538168.5	13761	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	6.54341856605645	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAAGACTCTGTGGCTGTG	-46756752	False	57	NA	False	AATAAA	-22	NA	46756809	46667820	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_46680511_46681971_46682065_46686173_46686287_46688774_46688920_46692168_46692256_46704571_46704665_46721361_46721470_46756377
transcript_95231.known	chr18	-	13897	7	FSM	ENSG00000101638.14	ENST00000315087.12	13897	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	5.66911711723165	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAAGACTCTGTGGCTGTG	-46756996	False	NA	NA	False	AATAAA	-22	NA	46757053	46667820	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_46680511_46681971_46682065_46686173_46686287_46688774_46688920_46692168_46692256_46704571_46704665_46756377
transcript_95234.known	chr18	-	1499	6	FSM	ENSG00000101638.14	ENST00000536490.1	1499	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	8.15843122174846	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTTAGGAACCGGGGCAGA	-46756753	False	57	NA	False	NA	NA	NA	46756810	46679882	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_46680511_46681971_46682065_46686173_46686287_46688774_46688920_46692168_46692256_46756377
transcript_95236.known	chr18	-	1440	4	FSM	ENSG00000101638.14	ENST00000588155.1	1440	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	4.32049379893857	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTCAGCACTCAGGTCC	-46756753	False	57	NA	False	NA	NA	NA	46756810	46691449	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_46692256_46704571_46704665_46721361_46721470_46756377
transcript_95253.known	chr18	-	11243	14	FSM	ENSG00000078043.16	ENST00000585916.6	11243	14	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_2	63.5668589921681	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATTGCTTTCATTGGTCA	-46910744	True	NA	NA	False	ATTAAA	-31	NA	46917507	46803217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_46812613_46815311_46815350_46820932_46821073_46827958_46828131_46829733_46829868_46836356_46836518_46844053_46844128_46844733_46844840_46846706_46846842_46855344_46855436_46855564_46855616_46864163_46864249_46890579_46891055_46917321
transcript_9527.nic	chr1	-	2391	17	NIC	ENSG00000058804.12	novel	4552	18	NA	NA	-35	-2242	combination_of_known_junctions	FALSE	canonical	3	27	junction_16	142.407371210201	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGCATTGATGGCAGTC	-53836534	True	NA	-16	True	AATAAA	-18	NA	53838498	53767719	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_53768034_53772328_53772490_53787157_53787259_53789132_53789197_53793228_53793280_53796688_53796805_53796898_53797145_53800692_53800849_53803927_53804010_53806424_53806518_53807655_53807792_53809694_53809747_53818970_53819080_53825797_53825937_53827998_53828174_53832489_53832592_53838204
transcript_95270.nic	chr18	-	2048	14	NIC	ENSG00000078043.16	novel	4543	13	NA	NA	-32	-160	combination_of_known_junctions	FALSE	canonical	3	67	junction_13	133.608143818686	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATGGAGTGGAAAACAGC	-46917524	False	NA	-17	True	AATAAA	-15	NA	46917539	46818350	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_46818448_46820932_46821073_46827958_46828131_46829733_46829868_46836356_46836518_46844053_46844128_46844733_46844840_46846706_46846842_46855344_46855436_46855564_46855616_46864163_46864249_46890579_46891055_46903526_46903636_46917321
transcript_95271.known	chr18	-	2043	13	FSM	ENSG00000078043.16	ENST00000398654.7	2043	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_11	126.823669145612	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGACTGCAACAAGAACCAAA	-46910691	True	NA	NA	False	NA	NA	NA	46917454	46812279	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_46812613_46815311_46815350_46820932_46821073_46827958_46828131_46829733_46829868_46836356_46836518_46844053_46844128_46844733_46844840_46846706_46846842_46855344_46855436_46855564_46855616_46890579_46891055_46917321
transcript_95277.known	chr18	-	4543	13	FSM	ENSG00000078043.16	ENST00000324794.11	4543	13	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_1	65.384068310934	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTTTTTTTTTTAGAT	-46910740	True	NA	2	True	AATAAA	-24	NA	46917503	46815710	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_46818448_46820932_46821073_46827958_46828131_46829733_46829868_46836356_46836518_46844053_46844128_46844733_46844840_46846706_46846842_46855344_46855436_46855564_46855616_46864163_46864249_46890579_46891055_46917321
transcript_95282.known	chr18	-	1590	12	FSM	ENSG00000078043.16	ENST00000545673.5	1590	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	134.23748537327	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTTTATGACTCAAATA	-46910742	True	NA	25	True	NA	NA	NA	46917505	46818190	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_46818448_46820932_46821073_46827958_46828131_46829733_46829868_46836356_46836518_46844053_46844128_46844733_46844840_46846706_46846842_46855344_46855436_46855564_46855616_46864163_46864249_46917321
transcript_95288.known	chr18	-	1838	11	FSM	ENSG00000078043.16	ENST00000590127.5	1838	11	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_2	25.9383885389976	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCGTGTGAGGTATTTA	-46910711	True	NA	NA	False	NA	NA	NA	46917474	46827757	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_46828131_46829733_46829868_46836356_46836518_46844053_46844128_46844733_46844840_46846706_46846842_46855344_46855436_46855564_46855616_46864163_46864249_46890579_46891055_46917321
transcript_95299.nnic	chr18	+	914	3	FSM	ENSG00000289168.1	ENST00000688132.1	1222	3	-10	318	-6	-122	multi-exon	FALSE	canonical	3	53	junction_1	34.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGGCCCAAGAACCCTCC	46863537	True	NA	24	True	NA	NA	NA	46868633	46875445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_46868693_46868811_46868991_46874769
transcript_95301.nnic	chr18	+	1034	3	FSM	ENSG00000289168.1	ENST00000688132.1	1222	3	-10	198	-6	-2	multi-exon	FALSE	canonical	3	53	junction_1	34.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCCGGGGAATATATGGG	46863537	True	NA	NA	False	AATAAA	-15	NA	46868633	46875565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_46868693_46868811_46868991_46874769
transcript_95307.nnic	chr18	+	1145	2	FSM	ENSG00000289168.1	ENST00000687635.1	1142	2	-5	2	-2	-2	multi-exon	FALSE	canonical	3	122	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCCGGGGAATATATGGG	46863545	True	NA	NA	False	AATAAA	-15	NA	46868641	46875565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_46868991_46874769
transcript_95312.nnic	chr18	+	1892	2	FSM	ENSG00000289168.1	ENST00000687124.1	467	2	-13	-1412	-6	1412	multi-exon	FALSE	canonical	3	53	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACTCGAGTCATTATTAG	46863537	True	NA	NA	False	NA	NA	NA	46868633	46870644	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_46868693_46868811
transcript_95317.known	chr18	+	3689	18	FSM	ENSG00000167216.19	ENST00000683218.1	3689	18	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_17	12.2990420759569	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATGCTTAAACTTCTTC	46916921	True	NA	NA	False	AATAAA	-16	NA	46917601	47102243	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_46917927_46946056_46946547_46946853_46946924_47046456_47046528_47052879_47053047_47054395_47054439_47058234_47058353_47059555_47059655_47062971_47063071_47063283_47063362_47067020_47067120_47069219_47069284_47069481_47069601_47075276_47075369_47077350_47077462_47099242_47099406_47100253_47100357_47100865
transcript_9532.nnic	chr1	-	2568	15	NNC	ENSG00000058804.12	novel	785	5	NA	NA	-114	-25338	at_least_one_novel_splicesite	TRUE	canonical	2	4	junction_1	148.560112893257	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGGTTAGGCGGTTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	53838577	53790815	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_53791433_53793228_53793280_53796688_53796805_53796898_53797145_53800692_53800849_53803927_53804010_53806424_53806518_53807655_53807792_53809694_53809747_53818970_53819080_53825797_53825937_53827998_53828174_53832489_53832592_53835499_53835621_53838204
transcript_95320.known	chr18	+	2893	16	FSM	ENSG00000167216.19	ENST00000356157.12	2893	16	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_15	12.3367562817604	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATGCTTAAACTTCTTC	46946584	True	NA	NA	False	AATAAA	-16	NA	46946834	47102243	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_46946924_47046456_47046528_47052879_47053047_47054395_47054439_47058234_47058353_47059555_47059655_47062971_47063071_47063283_47063362_47067020_47067120_47069219_47069284_47069481_47069601_47075276_47075369_47077350_47077462_47099242_47099406_47100253_47100357_47100865
transcript_95324.known	chr18	+	1348	7	FSM	ENSG00000167216.19	ENST00000592005.5	1348	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	13.832329280831	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCACGATTCAAATTATCT	NA	False	NA	NA	False	NA	NA	NA	46917491	47098482	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_46917927_46946056_46946276_46946853_46946924_47075276_47075369_47077350_47077462_47084331_47084443_47098172
transcript_95332.known	chr18	-	2185	7	FSM	ENSG00000167220.12	ENST00000300605.11	2185	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	182.945726621009	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTGTTTTTGTTTTTG	-47146237	True	NA	-9	True	AATAAA	-15	NA	47150500	47107409	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_47108786_47112976_47113041_47115131_47115349_47130243_47130329_47134495_47134705_47136338_47136450_47150377
transcript_95334.known	chr18	-	3679	3	FSM	ENSG00000134049.6	ENST00000256433.6	3679	3	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_1	57.5	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTTCTCATTGATTTAT	-47168621	True	NA	NA	False	AGTAAA	-20	NA	47176364	47152833	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_47156233_47157435_47157538_47176186
transcript_95337.known	chr18	-	4109	9	FSM	ENSG00000215474.8	ENST00000425639.3	4109	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	2.11763429326218	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTGTTCATGTAGTTA	NA	False	NA	NA	False	AATAAA	-16	NA	47251660	47206168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_47206893_47212085_47212152_47219942_47220011_47230458_47230558_47230934_47231001_47244907_47244983_47245497_47245562_47246570_47249231_47251373
transcript_95341.nnic	chr18	+	2187	4	NNC	ENSG00000287673.1	novel	938	2	NA	NA	-437	707	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	2.16024689946929	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACGGTGTTTGTCGATCA	NA	False	NA	108	True	TTTAAA	-14	NA	47263497	47283646	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr18_+_47264319_47264976_47265028_47265503_47265558_47282385
transcript_95345.nic	chr18	-	3825	12	NIC	ENSG00000175387.16	novel	12075	11	NA	NA	-363	970	combination_of_known_junctions	FALSE	canonical	3	122	junction_11	67.1747443686371	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCTTTGGTACTTGTTC	-47931491	False	NA	-6	True	CATAAA	-17	NA	47931509	47840254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_47841951_47845339_47845485_47845662_47845801_47848474_47848688_47851273_47851328_47865058_47865134_47868322_47868458_47869242_47869437_47870474_47870565_47896520_47896810_47930360_47930447_47930799
transcript_95346.nic	chr18	-	2936	12	NIC	ENSG00000175387.16	novel	12075	11	NA	NA	-444	0	combination_of_known_junctions	FALSE	canonical	3	122	junction_11	67.1747443686371	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGACCTTAATGTGTTC	-47931563	True	NA	-20	True	AATAAA	-36	NA	47931590	47841224	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_47841951_47845339_47845485_47845662_47845801_47848474_47848688_47851273_47851328_47865058_47865134_47868322_47868458_47869242_47869437_47870474_47870565_47896520_47896810_47930360_47930447_47930799
transcript_95348.nic	chr18	-	2766	12	NIC	ENSG00000175387.16	novel	12075	11	NA	NA	-444	-170	combination_of_known_junctions	FALSE	canonical	3	122	junction_11	67.1747443686371	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTGTTATTCCCACTTC	-47931563	True	NA	-38	True	TATAAA	-12	NA	47931590	47841394	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_47841951_47845339_47845485_47845662_47845801_47848474_47848688_47851273_47851328_47865058_47865134_47868322_47868458_47869242_47869437_47870474_47870565_47896520_47896810_47930360_47930447_47930799
transcript_95349.nic	chr18	-	2566	12	NIC	ENSG00000175387.16	novel	12075	11	NA	NA	-444	-370	combination_of_known_junctions	FALSE	canonical	3	122	junction_11	67.1747443686371	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTAATGATGTCTTATTG	-47931563	True	NA	-6	True	ATTAAA	-21	NA	47931590	47841594	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_47841951_47845339_47845485_47845662_47845801_47848474_47848688_47851273_47851328_47865058_47865134_47868322_47868458_47869242_47869437_47870474_47870565_47896520_47896810_47930360_47930447_47930799
transcript_95350.nic	chr18	-	2480	12	NIC	ENSG00000175387.16	novel	12075	11	NA	NA	-444	-456	combination_of_known_junctions	FALSE	canonical	3	122	junction_11	67.1747443686371	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGTTTCCTATATTTG	-47931563	True	NA	-13	True	ATTAAA	-11	NA	47931590	47841680	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_47841951_47845339_47845485_47845662_47845801_47848474_47848688_47851273_47851328_47865058_47865134_47868322_47868458_47869242_47869437_47870474_47870565_47896520_47896810_47930360_47930447_47930799
transcript_95352.known	chr18	-	12075	11	FSM	ENSG00000175387.16	ENST00000402690.6	12075	11	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_10	75.1039279931483	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCAGTTTTTACAGTCT	-47929825	True	NA	-92	True	AATAAA	-19	NA	47931141	47831550	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_47841951_47845339_47845485_47845662_47845801_47848474_47848688_47851273_47851328_47865058_47865134_47868322_47868458_47869242_47869437_47870474_47870565_47896520_47896810_47930799
transcript_95365.known	chr18	-	10445	10	FSM	ENSG00000175387.16	ENST00000356825.8	10445	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_8	116.236455470076	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATGGGACTAATTTTTAA	-47931128	False	NA	-23	True	ATTAAA	-30	NA	47931146	47833095	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_47841951_47845339_47845485_47845662_47845801_47848474_47848688_47851273_47851328_47865058_47865134_47868322_47868458_47869242_47869437_47896520_47896810_47930799
transcript_95376.known	chr18	+	4407	13	FSM	ENSG00000134030.14	ENST00000382998.8	4407	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8.03983139679489	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGGCTCCAGACATACTG	48538804	True	NA	14	True	TATAAA	-45	NA	48539157	48861906	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_48539313_48539757_48539832_48619537_48619746_48636613_48636686_48663751_48663826_48664446_48664552_48670668_48670745_48711618_48711696_48757918_48758412_48761389_48761690_48817220_48817377_48857587_48857642_48859343
transcript_95377.known	chr18	+	5765	12	FSM	ENSG00000134030.14	ENST00000256413.8	5765	12	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	6.20849857416868	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCAGAGTCTGTGCTCTT	48538988	True	NA	NA	False	AATAAA	-21	NA	48539030	48863217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_48539313_48619537_48619746_48636613_48636686_48663751_48663826_48664446_48664552_48670668_48670745_48711618_48711696_48757918_48758406_48761389_48761690_48817220_48817377_48857587_48857642_48859343
transcript_95382.known	chr18	-	1278	4	FSM	ENSG00000101665.10	ENST00000589634.1	1278	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	43.3666538560063	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCGTGCGGAGGGGACAGA	-48950398	False	NA	NA	False	NA	NA	NA	48950424	48921371	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_48921911_48942480_48942553_48948383_48948438_48949811
transcript_95388.known	chr18	-	5049	17	FSM	ENSG00000141627.14	ENST00000269445.10	5049	17	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_11	17.1472255408856	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATACTTGCATTAATTTTG	NA	False	NA	NA	False	AATAAA	-20	NA	49460802	49041473	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_49044205_49097401_49097516_49118743_49118927_49163684_49163788_49257009_49257105_49258379_49258494_49272177_49272304_49281996_49282176_49286433_49286617_49331863_49332007_49333727_49333854_49363160_49363234_49378566_49378701_49379664_49379759_49391592_49391646_49430254_49430448_49460397
transcript_9540.nic	chr1	-	1929	12	NIC	ENSG00000058799.15	novel	1602	11	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	3	87	junction_2	101.334565745732	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGACTTTGACCTCAA	NA	False	NA	-18	True	AATAAA	-27	NA	53889840	53851718	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_53852271_53855000_53855052_53860055_53860154_53866199_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53883112_53883277_53888906_53888987_53889243_53889464_53889712
transcript_95400.nnic	chr18	-	2469	16	NIC	ENSG00000141627.14	novel	5049	17	NA	NA	-19	2	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	45.1921330420339	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCAGTTTTATTTCGAAG	-49456666	True	NA	-22	True	AATAAA	-21	NA	49460733	49043801	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_49044205_49097401_49097516_49163684_49163788_49257009_49257105_49258379_49258494_49272177_49272304_49281996_49282176_49286433_49286617_49331863_49332007_49333727_49333854_49363160_49363234_49378566_49378701_49379664_49379759_49391592_49391646_49430254_49430448_49460397
transcript_95412.known	chr18	-	856	8	FSM	ENSG00000265681.8	ENST00000618613.5	856	8	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_7	6439.05065889026	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGTTGTCTTTATTAGT	-49315662	True	NA	-21	True	AATAAA	-21	NA	49492409	49488480	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49491735_49491834_49492257
transcript_95413.known	chr18	-	758	8	FSM	ENSG00000265681.8	ENST00000583637.5	758	8	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_7	6435.06843120458	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTGAAGAAACAAAAACTTAT	-49315652	True	NA	-92	True	AAGAAA	-40	NA	49492399	49488551	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49491735_49491834_49492274
transcript_95414.known	chr18	-	747	8	FSM	ENSG00000265681.8	ENST00000618619.4	747	8	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_6	6366.89601111299	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAGTGTCCTTACAAGAT	-49315735	True	NA	7	True	ATTAAA	-39	NA	49492482	49488452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49491745_49491834_49492457
transcript_95417.known	chr18	-	684	7	FSM	ENSG00000265681.8	ENST00000578532.5	684	7	0	0	0	0	multi-exon	FALSE	canonical	3	1654	junction_6	4884.49852993006	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAGAAGAAACTGAAGAAACA	-49315685	True	NA	-101	True	AAGAAA	-31	NA	49492432	49488560	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49492274
transcript_95418.known	chr18	-	614	7	FSM	ENSG00000265681.8	ENST00000580261.6	614	7	0	0	0	0	multi-exon	FALSE	canonical	3	8803	junction_6	2523.35183282519	2038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGTTGTCTTTATTAGT	-49315718	True	NA	-21	True	AATAAA	-21	NA	49492465	49488480	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49492457
transcript_9542.known	chr1	-	1602	11	FSM	ENSG00000058799.15	ENST00000464950.6	1602	11	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_2	85.1964788004763	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGACTTTGACCTCAA	-53887540	True	NA	-18	True	AATAAA	-27	NA	53889733	53851718	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_53852271_53855000_53855052_53860055_53860154_53866199_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53883112_53883277_53888906_53888987_53889712
transcript_95421.nic	chr18	-	986	7	NIC	ENSG00000265681.8	novel	747	8	NA	NA	-83	0	intron_retention	FALSE	canonical	3	475	junction_6	5301.56798870757	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTTGGTTGTCTTTATT	NA	False	NA	-24	True	AATAAA	-18	NA	49492591	49488483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491834_49492457
transcript_95425.known	chr18	-	650	7	FSM	ENSG00000265681.8	ENST00000615760.4	650	7	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_6	6959.00408144409	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGTCGGATTAACCCAT	-49315681	True	NA	NA	False	NA	NA	NA	49492428	49489470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49491745_49491834_49492274
transcript_95426.known	chr18	-	584	6	FSM	ENSG00000265681.8	ENST00000581373.5	584	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	5487.52845641824	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTTGGTTGTCTTTATT	-49315732	True	NA	-24	True	AATAAA	-18	NA	49492479	49488483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491531_49491585_49492457
transcript_95430.known	chr18	-	795	6	FSM	ENSG00000265681.8	ENST00000617346.4	795	6	0	0	0	0	multi-exon	FALSE	canonical	3	475	junction_5	5775.55508674274	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATAAGTAGTTGCTCGG	-49315736	True	NA	NA	False	AAAAAG	-1	NA	49492483	49489358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491834_49492457
transcript_95436.known	chr18	-	5548	3	FSM	ENSG00000177576.12	ENST00000318240.8	5548	3	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_2	102.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTGAGTTTTTAATTTA	-49310487	False	176747	-1	True	AATAAA	-30	NA	49487234	49477242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_49482411_49483583_49483772_49487042
transcript_95437.known	chr18	-	5395	3	FSM	ENSG00000177576.12	ENST00000613385.4	5395	3	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_2	149	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGTATCTTGAGTTTT	-49310505	False	176747	-8	True	AATAAA	-23	NA	49487252	49477249	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_49482411_49483583_49483772_49487206
transcript_9544.known	chr1	-	1821	11	FSM	ENSG00000058799.15	ENST00000072644.7	1821	11	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_10	84.8070751765441	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTCTGCATTTTGT	-53887604	True	NA	-32	True	AATAAA	-13	NA	53889797	53851732	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_53852271_53860055_53860154_53866199_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53883112_53883277_53888906_53888987_53889243_53889464_53889712
transcript_95440.known	chr18	-	859	6	FSM	ENSG00000265681.8	ENST00000579408.5	859	6	0	0	0	0	multi-exon	FALSE	canonical	3	10533	junction_1	1753.85844354669	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTTGGTTGTCTTTATT	-49315093	False	NA	-24	True	AATAAA	-18	NA	49491840	49488483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531
transcript_95441.known	chr18	-	705	6	FSM	ENSG00000265681.8	ENST00000580210.5	705	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	5759.97620133972	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAGCATTAAAATAAATGT	-49315067	False	NA	-58	True	AGTAAA	-1	NA	49491814	49488517	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491625
transcript_95443.known	chr18	+	10418	10	FSM	ENSG00000101670.12	ENST00000261292.9	10418	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	2.87174399629335	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTTGTACCATATTACAT	49561601	True	NA	8	True	AATAAA	-21	NA	49562056	49599185	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_49562406_49565316_49565499_49567441_49567622_49569436_49569549_49575368_49575591_49581414_49581658_49582361_49582483_49583555_49583775_49586745_49586851_49590500
transcript_95446.known	chr18	-	1693	9	FSM	ENSG00000167306.20	ENST00000592688.1	1693	9	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_7	8.46223227050641	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTGCTCAGAATAAAAACAC	-49849832	True	NA	-34	True	NA	NA	NA	49849846	49826289	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_49826624_49835343_49835425_49836710_49836886_49837516_49837803_49839143_49839295_49841364_49841455_49843240_49843393_49847145_49847290_49849566
transcript_95447.known	chr18	-	3109	19	FSM	ENSG00000167306.20	ENST00000324581.10	3109	19	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_11	10.8344728745397	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATTTTAAGTTTGATTT	NA	False	NA	-4	True	AATAAA	-16	NA	49902833	49826259	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_49826624_49835343_49835425_49836710_49836886_49837516_49837803_49839143_49839295_49841364_49841455_49843240_49843393_49847145_49847290_49849566_49849661_49853448_49853648_49863226_49863328_49864140_49864381_49872166_49872233_49875686_49875828_49877762_49877883_49878944_49879091_49880370_49880456_49894940_49895175_49902593
transcript_95449.known	chr18	-	2926	10	FSM	ENSG00000167315.18	ENST00000285093.15	2926	10	0	0	0	0	multi-exon	FALSE	canonical	3	630	junction_9	123.546662349809	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTTTACATATTCT	-49808002	False	5531	1	True	AATAAA	-19	NA	49813533	49782163	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_49783932_49785196_49785352_49787290_49787362_49791469_49791600_49792151_49792328_49794279_49794428_49795764_49795882_49797465_49797595_49802686_49802854_49813468
transcript_95450.nic	chr18	-	1782	10	NIC	ENSG00000167315.18	novel	1657	10	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_9	294.48335172713	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAATATTTTCCTGTCAT	-49808412	True	NA	-12	True	AATAAA	-16	NA	49813943	49783504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_49783932_49785196_49785352_49787290_49787362_49791469_49791600_49792151_49792328_49794279_49794428_49795764_49795882_49797465_49797595_49802686_49802854_49813681
transcript_95451.nic	chr18	-	1742	10	NIC	ENSG00000167315.18	novel	1657	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	308.24845678626	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAATATTTTCCTGTCAT	-49808422	True	NA	-12	True	AATAAA	-16	NA	49813953	49783504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_49783932_49785196_49785352_49787290_49787362_49791469_49791600_49792151_49792328_49794279_49794428_49795764_49795882_49797465_49797595_49802686_49802854_49813731
transcript_95453.known	chr18	-	1657	10	FSM	ENSG00000167315.18	ENST00000587994.5	1657	10	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_9	266.160770128799	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAATATTTTCCTGTCAT	-49808422	True	NA	-12	True	AATAAA	-16	NA	49813953	49783504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_49783932_49785196_49785352_49787290_49787362_49791469_49791600_49792151_49792328_49794279_49794428_49795764_49795882_49797465_49797595_49802686_49802854_49813816
transcript_95462.nic	chr18	-	3228	18	NIC	ENSG00000141644.18	novel	2179	18	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_1	42.9103838023186	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTACATGCTTAGTGTTTC	-50281658	False	NA	-4	True	TTTAAA	-30	NA	50281668	50268846	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_50269819_50271468_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274185_50274354_50274976_50275046_50275128_50275246_50275369_50275445_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
transcript_95467.nic	chr18	-	3143	18	NIC	ENSG00000141644.18	novel	2179	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_1	42.9103838023186	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGAATGGATTTCCAACT	-50281757	False	7686	-57	True	ATTAAA	-22	NA	50281767	50269030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_50269819_50271468_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274185_50274354_50274976_50275046_50275128_50275246_50275369_50275445_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
transcript_9547.nic	chr1	-	1659	10	NIC	ENSG00000058799.15	novel	1821	11	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	3	201	junction_1	42.0399574772782	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTCTGCATTTTGT	NA	False	NA	-32	True	AATAAA	-13	NA	53889855	53851732	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_53852271_53860055_53860154_53866199_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53883112_53883277_53888906_53888987_53889712
transcript_95475.known	chr18	-	2434	17	FSM	ENSG00000141644.18	ENST00000382948.9	2434	17	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	59.1650234513602	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGTCCACTGTGACCCT	-50281764	False	7686	NA	False	NA	NA	NA	50281774	50267516	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_50267664_50271468_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274185_50274354_50274976_50275046_50275128_50275246_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
transcript_95479.known	chr18	-	2473	17	FSM	ENSG00000141644.18	ENST00000457839.6	2473	17	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_5	31.4759332665451	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCTATTTGGTGTGTTC	-50281456	False	7686	-28	True	AATAAA	-11	NA	50281466	50271049	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274185_50274354_50274976_50275046_50275128_50275246_50275369_50275445_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
transcript_95484.known	chr18	-	3009	17	FSM	ENSG00000141644.18	ENST00000269468.10	3009	17	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_9	53.0312039628557	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACATGCTTAGTGTTTCT	-50281513	False	7686	-3	True	TTTAAA	-31	NA	50281523	50268845	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_50269819_50271468_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274185_50274354_50274976_50275046_50275128_50275246_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
transcript_95486.nic	chr18	-	3184	17	NIC	ENSG00000141644.18	novel	3091	16	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_1	46.2708989944004	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTACATGCTTAGTGTTTC	-50281782	False	NA	-4	True	TTTAAA	-30	NA	50281792	50268846	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_50269819_50271468_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274976_50275046_50275128_50275246_50275369_50275445_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
transcript_95504.nic	chr18	-	2984	17	NIC	ENSG00000141644.18	novel	2179	18	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_1	46.2708989944004	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGAATGGATTTCCAACT	-50281766	False	NA	-57	True	ATTAAA	-22	NA	50281776	50269030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_50269819_50271468_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274976_50275046_50275128_50275246_50275369_50275445_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
transcript_95529.known	chr18	-	3091	16	FSM	ENSG00000141644.18	ENST00000347968.7	3091	16	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_8	56.6142502673429	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTACATGCTTAGTGTTTC	-50281764	False	7686	-4	True	TTTAAA	-30	NA	50281774	50268846	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_50269819_50271468_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274976_50275046_50275128_50275246_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
transcript_9553.known	chr1	-	894	6	FSM	ENSG00000081870.12	ENST00000371378.6	894	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	254.452667504194	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTTTTTGCCAAGTTT	-53941085	True	NA	NA	False	AATAAA	-15	NA	53945572	53916573	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_53917117_53923903_53923948_53928371_53928441_53930038_53930146_53939984_53940098_53945554
transcript_95532.known	chr18	-	2913	16	FSM	ENSG00000141644.18	ENST00000590208.5	2913	16	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	59.4955087007041	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGAATGGATTTCCAACT	-50281674	False	NA	-57	True	ATTAAA	-22	NA	50281684	50269030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_50269819_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274185_50274354_50274976_50275046_50275128_50275246_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
transcript_9554.known	chr1	-	685	6	FSM	ENSG00000081870.12	ENST00000194214.10	685	6	0	0	0	0	multi-exon	FALSE	canonical	3	526	junction_5	57.4372701301167	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTCAGTTTTTATTTA	-53941212	True	NA	-8	True	ATTAAA	-15	NA	53945699	53921560	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_53921768_53923903_53923948_53928371_53928441_53930038_53930146_53939984_53940098_53945554
transcript_95552.known	chr18	-	4905	16	FSM	ENSG00000141644.18	ENST00000591416.5	4905	16	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_8	45.368809648137	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACATGCTTAGTGTTTCT	-50281759	False	7686	-3	True	TTTAAA	-31	NA	50281769	50268845	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274185_50274354_50274976_50275046_50275128_50275246_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
transcript_9556.nnic	chr1	-	618	6	NNC	ENSG00000081870.12	novel	685	6	NA	NA	-615	0	at_least_one_novel_splicesite	FALSE	canonical	3	174	junction_5	193.392864397837	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTCAGTTTTTATTTA	-53946301	False	NA	-8	True	ATTAAA	-15	NA	53946314	53921560	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_-_53921768_53923903_53923948_53928371_53928441_53930038_53930146_53939984_53940098_53946236
transcript_95561.nic	chr18	-	2634	16	NIC	ENSG00000141644.18	novel	2473	17	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_5	35.143262354097	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTGTGTTCCTCTGTGG	-50281777	False	NA	-20	True	AATAAA	-19	NA	50281787	50271041	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274976_50275046_50275128_50275246_50275369_50275445_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
transcript_95571.known	chr18	-	1845	15	FSM	ENSG00000141644.18	ENST00000398493.5	1845	15	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_7	49.1060908978235	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATATTTGCAGACTGGCT	-50281490	False	7686	NA	False	NA	NA	NA	50281500	50271468	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274976_50275046_50275128_50275246_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
transcript_95619.known	chr18	-	2242	15	FSM	ENSG00000154832.16	ENST00000589940.5	2242	15	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	82.8145210573555	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCTGTCTCCACATTGC	-50279965	True	NA	-15	True	AATAAA	-17	NA	50287651	50282346	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_50282740_50282853_50283007_50283264_50283325_50283514_50283565_50283704_50283816_50283893_50284102_50284377_50284563_50284731_50284840_50285001_50285248_50285324_50285352_50285748_50285929_50286021_50286258_50286538_50286640_50286739_50286859_50287586
transcript_95626.known	chr18	-	2320	15	FSM	ENSG00000154832.16	ENST00000285106.11	2320	15	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_9	38.3762921074766	934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCTGTCTCCACATTGC	-50280006	True	NA	-15	True	AATAAA	-17	NA	50287692	50282346	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_50282740_50282853_50283007_50283264_50283362_50283514_50283565_50283704_50283816_50283893_50284102_50284377_50284563_50284731_50284840_50285001_50285248_50285324_50285352_50285748_50285929_50286021_50286258_50286538_50286640_50286739_50286859_50287586
transcript_9564.known	chr1	-	760	5	FSM	ENSG00000081870.12	ENST00000371377.3	760	5	0	0	0	0	multi-exon	FALSE	canonical	3	526	junction_4	64.1458299502002	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGTGAGATTCATATAAG	-53941123	True	NA	NA	False	AAAAAG	-43	NA	53945610	53923532	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_53923948_53928371_53928441_53930038_53930146_53939984_53940098_53945554
transcript_95641.known	chr18	-	2423	14	FSM	ENSG00000154832.16	ENST00000673786.1	2423	14	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_9	82.079193970459	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTTGAAGAAACCAAGGA	NA	False	NA	-32	True	NA	NA	NA	50287839	50282363	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_50282740_50282853_50283007_50283264_50283362_50283514_50283565_50283704_50283816_50283893_50284102_50284377_50284563_50284731_50284840_50285001_50285248_50285748_50285929_50286021_50286258_50286538_50286640_50286739_50286859_50287586
transcript_9568.known	chr1	+	1764	9	FSM	ENSG00000116212.15	ENST00000371370.8	1764	9	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	65.5809375886012	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGCTTGTGGATTATAG	53942417	True	NA	23	True	AATAAA	-19	NA	53946349	53968168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_53946550_53947787_53947822_53951985_53952473_53958148_53958281_53960355_53960475_53962033_53962123_53962295_53962410_53966295_53966381_53967664
transcript_95699.known	chr18	+	979	7	FSM	ENSG00000154839.10	ENST00000398452.6	979	7	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	28.487814158962	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCTTGTGAACTTTTGAA	NA	False	NA	NA	False	NA	NA	NA	50375039	50392247	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_50375240_50375819_50375919_50380125_50380251_50382128_50382227_50385215_50385354_50391123_50391294_50392098
transcript_9570.nic	chr1	+	2143	9	NIC	ENSG00000116212.15	novel	1764	9	NA	NA	-28	0	intron_retention	FALSE	canonical	3	29	junction_2	101.591092129182	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGCTTGTGGATTATAG	53945620	True	NA	23	True	AATAAA	-19	NA	53946056	53968168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_53946550_53947861_53947982_53951985_53952473_53958148_53958281_53960355_53960475_53962033_53962123_53962295_53962410_53966295_53966381_53967664
transcript_95701.known	chr18	+	2849	7	FSM	ENSG00000154839.10	ENST00000285116.8	2849	7	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	20.0783188760635	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGCATTTCCCTGAGTT	50374224	True	NA	14	True	AATAAA	-14	NA	50375045	50394168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_50375195_50375819_50375919_50380125_50380251_50382128_50382227_50385215_50385354_50391123_50391294_50392098
transcript_95705.known	chr18	+	1095	6	FSM	ENSG00000154839.10	ENST00000417656.6	1095	6	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_4	44.0136342512181	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAGATGGGGTTTCACCA	NA	False	NA	NA	False	NA	NA	NA	50375042	50392549	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_50375195_50375819_50375919_50380125_50380251_50382128_50382227_50391123_50391294_50392098
transcript_95708.known	chr18	+	4763	6	FSM	ENSG00000141639.12	ENST00000400384.7	4763	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	3.87814388593306	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTATGTATTATTCAT	50560073	False	NA	NA	False	AATAAA	-19	NA	50560086	50731826	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_50560244_50663088_50664505_50715078_50715224_50721937_50722100_50725961_50726176_50729157
transcript_95709.known	chr18	+	4330	4	FSM	ENSG00000141639.12	ENST00000592595.5	4330	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	9.0921211313239	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTATTTATGTATTATTC	50560101	True	NA	NA	False	AATAAA	-17	NA	50560141	50731824	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_50560244_50663088_50664505_50715078_50715224_50729157
transcript_95711.known	chr18	-	2129	8	FSM	ENSG00000134042.14	ENST00000585524.5	2129	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	1.19522860933439	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATTACAAGAAAAATCT	-50819979	True	NA	NA	False	NA	NA	NA	50820019	50798203	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_50799391_50800035_50800144_50801348_50801505_50805153_50805337_50806703_50806851_50809301_50809405_50819580_50819703_50819896
transcript_95712.known	chr18	-	1125	7	FSM	ENSG00000134042.14	ENST00000436348.6	1125	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	1.21335164821342	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGACTGCTTTCACTTA	NA	False	NA	NA	False	AGTAAA	-2	NA	50820064	50799149	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_50799391_50800035_50800144_50801348_50801505_50805153_50805337_50806703_50806851_50819580_50819703_50819896
transcript_95714.known	chr18	+	9031	16	FSM	ENSG00000082212.13	ENST00000321341.11	9031	16	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_7	24.2224872564501	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTATGATCTTGTTTTT	50873937	True	NA	7	True	AGTAAA	-19	NA	50879117	50954257	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_50879309_50895808_50895929_50908062_50908197_50912800_50912951_50916167_50916244_50917346_50917509_50918109_50918214_50920455_50920566_50920660_50920759_50921073_50921188_50924097_50924213_50925755_50925899_50932257_50932361_50939569_50939641_50940287_50940387_50947016
transcript_95723.nnic	chr18	+	3392	13	NNC	ENSG00000141646.15	novel	8772	12	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	107.267934268458	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTTGAATTCTAGGTTT	51022916	True	NA	4	True	AATAAA	-17	NA	51030208	51079777	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr18_+_51030421_51030539_51030624_51046919_51047296_51048685_51048861_51049294_51049325_51054780_51054994_51058124_51058245_51058339_51058457_51059865_51059917_51065422_51065607_51067018_51067188_51076637_51076777_51078255
transcript_95728.known	chr18	+	8772	12	FSM	ENSG00000141646.15	ENST00000342988.8	8772	12	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_1	22.4016675884587	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTATGTGCTCATTCTTT	51022920	True	NA	16	True	ATTAAA	-18	NA	51030212	51085042	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_51030624_51046919_51047296_51048685_51048861_51049294_51049325_51054780_51054994_51058124_51058245_51058339_51058457_51059865_51059917_51065422_51065607_51067018_51067188_51076637_51076777_51078255
transcript_9573.known	chr1	+	1727	8	FSM	ENSG00000116212.15	ENST00000319223.8	1727	8	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	51.0138036541612	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGCTTGTGGATTATAG	53942420	True	NA	23	True	AATAAA	-19	NA	53946352	53968168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_53946550_53951985_53952473_53958148_53958281_53960355_53960475_53962033_53962123_53962295_53962410_53966295_53966381_53967664
transcript_95732.known	chr18	+	2211	4	FSM	ENSG00000141642.9	ENST00000269466.8	2211	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	6.16441400296898	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTCTTAAAACATGCTCC	50967415	True	NA	5	True	AATAAA	-18	NA	50968039	50988121	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_50968115_50974396_50974562_50984095_50984564_50986618
transcript_95734.known	chr18	+	694	4	FSM	ENSG00000141642.9	ENST00000588577.5	694	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	19.4821855949366	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACCAGTTGCCTTGGCCA	50967366	True	NA	NA	False	NA	NA	NA	50967990	50986946	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_50968115_50974396_50974562_50984486_50984564_50986618
transcript_95735.known	chr18	+	1505	2	FSM	ENSG00000141642.9	ENST00000586966.2	1505	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTAGTTGAGTAGTGAG	50967420	True	NA	NA	False	AATAAA	-17	NA	50968044	50969866	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_50968115_50968431
transcript_95743.known	chr18	+	6020	10	FSM	ENSG00000101751.11	ENST00000579534.6	6020	10	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	40.4340646021015	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGAAGTCCAGAGTTTTC	54265321	True	NA	9	True	AATAAA	-14	NA	54269516	54298234	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_54269662_54271359_54271486_54273925_54274091_54277702_54277856_54280666_54280904_54282836_54283016_54283921_54284014_54287280_54287412_54291832_54292039_54293648
transcript_95745.nnic	chr18	+	2542	10	NNC	ENSG00000101751.11	novel	6020	10	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	104.118996499672	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAGAATATTTTTCATGAA	54265327	True	NA	16	True	AATAAA	-18	NA	54269522	54294724	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr18_+_54269700_54271359_54271486_54273925_54274091_54277702_54277856_54280666_54280904_54282836_54283016_54283921_54284014_54287280_54287412_54291832_54292039_54293648
transcript_95746.nic	chr18	+	2849	10	NIC	ENSG00000101751.11	novel	2705	9	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	103.809417018536	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAGAATATTTTTCATGAA	54265353	True	NA	16	True	AATAAA	-18	NA	54269548	54294724	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_+_54270033_54271359_54271486_54273925_54274091_54277702_54277856_54280666_54280904_54282836_54283016_54283921_54284014_54287280_54287412_54291832_54292039_54293648
transcript_95747.known	chr18	+	2030	9	FSM	ENSG00000101751.11	ENST00000406285.7	2030	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	119.534513844329	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTCTGAAAAGCAAGGGAAT	54265323	True	NA	NA	False	CATAAA	-20	NA	54269518	54294483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_54269662_54271359_54271486_54273925_54274091_54277702_54277856_54282836_54283016_54283921_54284014_54287280_54287412_54291832_54292039_54293648
transcript_95751.known	chr18	+	2705	9	FSM	ENSG00000101751.11	ENST00000579434.5	2705	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	116.548005130933	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAGAATATTTTTCATGAA	54265371	True	NA	16	True	AATAAA	-18	NA	54269566	54294724	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_54270033_54273925_54274091_54277702_54277856_54280666_54280904_54282836_54283016_54283921_54284014_54287280_54287412_54291832_54292039_54293648
transcript_95758.known	chr18	+	1204	6	FSM	ENSG00000101751.11	ENST00000583136.5	1204	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	126.724898895205	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAAATTTTAGAAAAAGAA	54265389	True	NA	NA	False	NA	NA	NA	54269584	54282911	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_54270033_54271359_54271486_54273925_54274091_54277702_54277856_54280666_54280904_54282836
transcript_95762.known	chr18	+	2096	8	FSM	ENSG00000166845.15	ENST00000648616.1	2096	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	69.6047148297485	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAAGAGAACCTCCTCAT	54358469	False	NA	69	True	NA	NA	NA	54358481	54378845	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_54358871_54360526_54360856_54361642_54361892_54362770_54362922_54365718_54365822_54372465_54372598_54374213_54374285_54378173
transcript_95766.known	chr18	+	5237	8	FSM	ENSG00000166845.15	ENST00000300091.5	5237	8	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	49.342617254773	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGAGGTTCTGGAAATC	54358572	False	NA	24	True	TATAAA	-38	NA	54358584	54382032	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_54358871_54360526_54360856_54361642_54361949_54362770_54362922_54365718_54365822_54372465_54372598_54374213_54374285_54378173
transcript_95771.known	chr18	+	4056	8	FSM	ENSG00000166845.15	ENST00000382911.8	4056	8	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_3	37.6406206979988	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAATGTTAAATAGAAAA	54358572	False	NA	NA	False	NA	NA	NA	54358584	54380368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_54358871_54360526_54360856_54361642_54362432_54362770_54362922_54365718_54365822_54372465_54372598_54374213_54374285_54378173
transcript_9579.known	chr1	-	6457	8	FSM	ENSG00000116209.12	ENST00000234831.10	6457	8	0	0	0	0	multi-exon	FALSE	canonical	3	534	junction_7	150.681174426438	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTATCTTGTAAAAGTGTC	-54042448	False	10756	-11	True	AATAAA	-28	NA	54053204	54026680	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_54032306_54036609_54036719_54040755_54040838_54041723_54041806_54043372_54043526_54045691_54045787_54047266_54047373_54052999
transcript_95792.known	chr18	-	8041	20	FSM	ENSG00000196628.20	ENST00000354452.8	8041	20	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_3	22.3526260022548	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTGGTTCATTTTCAAA	-55582620	True	NA	NA	False	ATTAAA	-17	NA	55588192	55222184	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232508_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55350358_55350409_55350873_55351004_55403453_55403519_55461018_55461116_55464075_55464138_55585279_55585353_55587044_55587137_55588037
transcript_95794.known	chr18	-	3789	20	FSM	ENSG00000196628.20	ENST00000629387.2	3789	20	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_19	38.6836734656597	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAAAACAAGTAAAGTT	-55588783	True	NA	22	True	AATACA	-29	NA	55589807	55226792	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232508_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55350358_55350409_55350873_55351004_55403453_55403519_55461018_55461116_55464075_55464138_55585279_55585353_55587044_55587137_55589296
transcript_95796.known	chr18	-	8317	20	FSM	ENSG00000196628.20	ENST00000356073.8	8317	20	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	30.5408313945686	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTCTTTTAGTATTATA	-55587605	False	NA	-3	True	TATAAA	-14	NA	55588629	55222333	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232520_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55350358_55350409_55350873_55351004_55403453_55403519_55461018_55461116_55464075_55464138_55585279_55585353_55587044_55587137_55588037
transcript_95813.nic	chr18	-	2785	20	NIC	ENSG00000196628.20	novel	3789	20	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_19	43.5377379527093	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAAAAGTGCAACTT	NA	False	NA	28	True	AAAACA	-16	NA	55589863	55227840	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_55228031_55228220_55228362_55228846_55229077_55232520_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55350358_55350409_55350873_55351004_55403453_55403519_55461018_55461116_55464075_55464138_55585279_55585353_55587044_55587137_55589296
transcript_95816.known	chr18	-	2398	19	FSM	ENSG00000196628.20	ENST00000568673.5	2398	19	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_18	42.7021336963649	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATTAATTTGTAAGTCT	-55584884	False	NA	NA	False	NA	NA	NA	55585908	55227678	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232508_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55350358_55350409_55350873_55351004_55403453_55403519_55461018_55461116_55464075_55464138_55585279_55585353_55585810
transcript_95818.known	chr18	-	2767	19	FSM	ENSG00000196628.20	ENST00000537578.5	2767	19	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_18	42.2998190463981	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGACTGAACGGCAATCTT	NA	False	NA	NA	False	NA	NA	NA	55589836	55227751	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232508_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55350358_55350409_55350873_55351004_55403453_55403519_55461018_55461116_55464075_55464138_55585279_55585353_55589296
transcript_9582.known	chr1	-	1116	8	FSM	ENSG00000116209.12	ENST00000371341.5	1116	8	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_7	220.906481275194	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGATGTTTGGGATTGT	NA	False	NA	34	True	NA	NA	NA	54053504	54031965	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_54032306_54036609_54036719_54040755_54040838_54041723_54041806_54043372_54043526_54045691_54045787_54047266_54047373_54053355
transcript_95823.known	chr18	-	2628	19	FSM	ENSG00000196628.20	ENST00000568740.5	2628	19	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_18	56.6069674636621	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAGAAAAAAGTGC	-55588782	True	NA	23	True	AAAACA	-11	NA	55589806	55227845	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232520_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55350358_55350409_55350873_55351001_55403453_55403519_55461018_55461116_55464075_55464138_55585279_55585353_55589296
transcript_95835.known	chr18	-	2572	19	FSM	ENSG00000196628.20	ENST00000540999.5	2572	19	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_18	47.3394623053328	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAATATAATTAA	-55585081	False	5572	NA	False	NA	NA	NA	55586105	55227689	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232520_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55350358_55350409_55350873_55351004_55403453_55403519_55461018_55461116_55464075_55464138_55585279_55585353_55585810
transcript_95845.known	chr18	-	8140	18	FSM	ENSG00000196628.20	ENST00000616053.4	8140	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	49.2256298055981	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTTTTAGTATTATATTT	-55587605	False	NA	0	True	TATAAA	-17	NA	55588629	55222330	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232520_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55403453_55403519_55461018_55461116_55464075_55464138_55585279_55585353_55587044_55587137_55588037
transcript_95861.known	chr18	-	2372	13	FSM	ENSG00000196628.20	ENST00000457482.7	2372	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_12	49.3903808673533	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATAATTAATTTGTAA	NA	False	NA	NA	False	NA	NA	NA	55322222	55227682	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232508_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55321669
transcript_95862.known	chr18	-	3163	13	FSM	ENSG00000196628.20	ENST00000570287.6	3163	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_12	54.8275072892755	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGCCAATATTCAATC	NA	False	NA	NA	False	ACTAAA	-35	NA	55321986	55226643	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232520_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55321669
transcript_95868.known	chr18	-	1339	2	FSM	ENSG00000267325.2	ENST00000657903.1	1339	2	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCAAAGGAGAGGCACGT	-55780294	False	NA	NA	False	AATAGA	-12	NA	55780312	55778855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_55780031_55780148
transcript_95873.known	chr18	+	518	3	FSM	ENSG00000267327.2	ENST00000589440.1	518	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCCAATTTCTCTGCATC	55892360	True	NA	NA	False	NA	NA	NA	55893037	56023462	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_55893443_56017727_56017780_56023401
transcript_95876.known	chr18	+	7213	27	FSM	ENSG00000091157.15	ENST00000357574.7	7213	27	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_22	5.81736331823373	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTTTTCCAGTGTTCAC	56650397	True	NA	25	True	AATAAA	-34	NA	56651360	57029811	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_56651577_56672496_56672675_56679331_56679439_56681312_56681392_56682678_56682854_56685955_56686033_56686854_56686975_56691215_56691362_56691714_56691818_56694618_56694761_56694949_56695199_56696241_56696463_56717963_56718160_56731382_56731598_56756582_56757353_56758864_56758954_56779430_56779550_56781532_56781657_56816030_56816145_56879943_56880166_56923921_56924109_56935787_56935906_56938532_56938683_56939310_56939394_56962429_56962530_57020744_57020850_57027003
transcript_95879.known	chr18	+	7295	28	FSM	ENSG00000091157.15	ENST00000254442.8	7295	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	12.4233728127226	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTTTTTCTCACAATAT	56650395	True	NA	6	True	AATAAA	-15	NA	56651358	57029792	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_56651577_56672496_56672675_56679331_56679439_56681312_56681392_56682678_56682854_56685955_56686033_56686854_56686975_56691215_56691362_56691714_56691818_56694618_56694761_56694949_56695199_56696241_56696463_56717963_56718160_56731382_56731598_56756582_56757353_56758864_56758954_56776781_56776881_56779430_56779550_56781532_56781657_56816030_56816145_56879943_56880166_56923921_56924109_56935787_56935906_56938532_56938683_56939310_56939394_56962429_56962530_57020744_57020850_57027003
transcript_95883.known	chr18	-	2035	10	FSM	ENSG00000091164.13	ENST00000587807.5	2035	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	437.540460210239	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTGTCTTTCTAAATC	-56651258	False	NA	-3	True	AATAAA	-23	NA	56651274	56602823	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_56603057_56610992_56611098_56614423_56614597_56616244_56616315_56618003_56618127_56624287_56624462_56626161_56626267_56626360_56626458_56638342_56639040_56651016
transcript_95886.known	chr18	-	6840	8	FSM	ENSG00000091164.13	ENST00000217515.11	6840	8	0	0	0	0	multi-exon	FALSE	canonical	3	825	junction_4	81.3611249495803	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTCTCTTGTATTTTGT	-56628602	True	NA	NA	False	ATTAAA	-16	NA	56638592	56597208	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_56603057_56610992_56611098_56614423_56614597_56616244_56616315_56618003_56618127_56624287_56624462_56626360_56626458_56638342
transcript_95892.known	chr18	-	2604	4	FSM	ENSG00000258609.3	ENST00000553704.3	2604	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	19.7371617907833	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTCTAGCAATTCTATT	-57071486	True	NA	-1	True	AATAAA	-15	NA	57072119	57054557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_57056251_57057499_57058001_57069809_57070004_57071903
transcript_95894.known	chr18	+	10087	4	FSM	ENSG00000177511.6	ENST00000324000.4	10087	4	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_1	2.16024689946929	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCTGGTTGTCTGTCAC	57352455	True	NA	24	True	AATAAA	-24	NA	57352556	57368931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_57353026_57354401_57354525_57356912_57357471_57359994
transcript_95898.known	chr18	-	7695	11	FSM	ENSG00000066926.13	ENST00000652755.1	7695	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	39.2989821751149	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTCACACCTACATTATAT	-57583890	True	NA	NA	False	AGTAAA	-17	NA	57586702	57544388	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_57550847_57551314_57551375_57554259_57554425_57554844_57554953_57559144_57559244_57562873_57562981_57566446_57566582_57571391_57571541_57573245_57573366_57580054_57580200_57586553
transcript_959.nnic	chr1	+	2377	17	NNC	ENSG00000160072.20	novel	4098	16	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	141.643023455975	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCCGTGTCTCTCTATTGA	1464799	True	NA	18	True	AATAAA	-18	NA	1471755	1496202	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_1471844_1471927_1472090_1477273_1477351_1478643_1478746_1479048_1479109_1480866_1480937_1482137_1482304_1482544_1482615_1485015_1485172_1485781_1485839_1486109_1486236_1486543_1486669_1487862_1487915_1489203_1489275_1490256_1490425_1490562_1490672_1495484
transcript_95900.known	chr18	-	1874	11	FSM	ENSG00000066926.13	ENST00000585494.5	1874	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	42.0761214942632	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTACTTAATCTTTCC	-57583889	True	NA	NA	False	AAAAAG	-1	NA	57586701	57550253	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_57550847_57551314_57551375_57554259_57554425_57554844_57554953_57559144_57559244_57562873_57562981_57566446_57566582_57571391_57571604_57573245_57573366_57580072_57580200_57586553
transcript_95901.known	chr18	-	2521	11	FSM	ENSG00000066926.13	ENST00000651787.1	2521	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	43.1426702928783	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTCTGATCTTCTATGTT	-57586379	False	NA	-2	True	AATATA	-17	NA	57586391	57549568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_57550847_57551314_57551375_57554259_57554425_57554844_57554953_57559144_57559244_57562873_57562981_57566446_57566582_57571391_57571541_57573245_57573366_57580072_57580200_57586218
transcript_95916.known	chr18	-	2762	14	FSM	ENSG00000134440.12	ENST00000256854.10	2762	14	0	0	0	0	multi-exon	FALSE	canonical	3	1231	junction_13	126.674722052589	1027	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGGCTTAATTTTCTT	-57593581	True	NA	-30	True	AATAAA	-20	NA	57621836	57600655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_57601784_57602354_57602487_57602811_57602944_57605856_57605971_57606615_57606752_57607133_57607334_57607443_57607666_57609356_57609444_57611636_57611708_57613601_57613681_57615640_57615731_57615816_57615976_57620568_57620652_57621707
transcript_95950.known	chr18	-	6161	28	FSM	ENSG00000081923.15	ENST00000648908.2	6161	28	0	0	0	0	multi-exon	TRUE	canonical	1	5	junction_27	5.16504023252158	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTTTTGTTGTTGTTGT	-57803278	False	NA	3	True	AGTAAA	-36	NA	57803315	57646425	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_57648713_57650366_57650498_57652033_57652173_57652483_57652730_57653991_57654076_57655193_57655418_57661173_57661463_57662482_57662616_57667091_57667168_57668428_57668541_57669317_57669483_57671467_57671581_57674833_57675023_57684035_57684193_57685071_57685116_57688298_57688508_57691806_57691998_57694581_57694671_57695170_57695330_57695449_57695533_57697617_57697689_57697794_57697868_57701038_57701101_57701214_57701314_57704554_57704669_57706489_57706588_57731626_57731833_57802997
transcript_95956.known	chr18	+	1954	3	FSM	ENSG00000267040.7	ENST00000592201.1	1954	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	7	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATTAAGGCTAAAACTCA	57629458	True	NA	NA	False	AATAAA	-44	NA	57630349	57669296	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_57630519_57641558_57642053_57668005
transcript_95957.known	chr18	+	8633	31	FSM	ENSG00000049759.20	ENST00000400345.8	8633	31	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_13	59.1918631795508	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAAGTGTTATGGGTTGT	58042915	True	NA	15	True	AATAAA	-28	NA	58044225	58401539	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_58044709_58165787_58165862_58245426_58245509_58248898_58248938_58252000_58252055_58315981_58316033_58322424_58322487_58323231_58323335_58324995_58325163_58328994_58329128_58330737_58330915_58333817_58333893_58335477_58335538_58341037_58341170_58341677_58341798_58342905_58343104_58349536_58349615_58350990_58351046_58357193_58357253_58364267_58364334_58365998_58366229_58367745_58367868_58370396_58370468_58373173_58373270_58383245_58383320_58385525_58385587_58387438_58387499_58389084_58389193_58390645_58390743_58391486_58391560_58396166
transcript_95961.known	chr18	+	8251	30	FSM	ENSG00000049759.20	ENST00000382850.8	8251	30	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_12	38.6013498374691	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAAGTGTTATGGGTTGT	58044532	False	NA	15	True	AATAAA	-28	NA	58044547	58401539	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_58044709_58165787_58165862_58245426_58245509_58248898_58248938_58252000_58252055_58315981_58316033_58322424_58322487_58323231_58323335_58324995_58325163_58328994_58329128_58330737_58330915_58333817_58333893_58341037_58341170_58341677_58341798_58342905_58343104_58349536_58349615_58350990_58351046_58357193_58357253_58364267_58364334_58365998_58366229_58367745_58367868_58370396_58370468_58373173_58373270_58383245_58383320_58385525_58385587_58387438_58387499_58389084_58389193_58390645_58390743_58391486_58391560_58396166
transcript_95967.nic	chr18	+	3439	30	NIC	ENSG00000049759.20	novel	4978	29	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	70.2937272138302	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAATGACAATGAATGGAA	58194425	True	NA	9	True	AATAAA	-15	NA	58195404	58396573	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_+_58195734_58245426_58245509_58248898_58248938_58252000_58252055_58315981_58316033_58322424_58322487_58323231_58323335_58324995_58325163_58328994_58329128_58330737_58330915_58333817_58333893_58335477_58335538_58341037_58341170_58341677_58341798_58342905_58343104_58349536_58349615_58350990_58351046_58357193_58357253_58364267_58364334_58365998_58366229_58367745_58367868_58370396_58370468_58373173_58373270_58383245_58383320_58385525_58385587_58387438_58387499_58389084_58389193_58390645_58390743_58391486_58391560_58396166
transcript_95972.known	chr18	+	4978	29	FSM	ENSG00000049759.20	ENST00000456173.6	4978	29	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	54.5876939110878	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	58194410	True	NA	79	True	NA	NA	NA	58195389	58398157	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_58195734_58245426_58245509_58248898_58248938_58252000_58252055_58315981_58316033_58322424_58322487_58323231_58323335_58324995_58325163_58328994_58329128_58330737_58330915_58333817_58333893_58341037_58341170_58341677_58341798_58342905_58343104_58349536_58349615_58350990_58351046_58357193_58357253_58364267_58364334_58365998_58366229_58367745_58367868_58370396_58370468_58373173_58373270_58383245_58383320_58385525_58385587_58387438_58387499_58389084_58389193_58390645_58390743_58391486_58391560_58396166
transcript_95988.known	chr18	+	728	2	FSM	ENSG00000049759.20	ENST00000617539.1	728	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCGGTCGGTTTCACTGG	58043076	False	NA	10	True	AATAAA	-24	NA	58044386	58045477	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_58044709_58045071
transcript_95990.known	chr18	+	9289	17	FSM	ENSG00000172175.15	ENST00000649217.2	9289	17	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	6.77743268133295	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCAAGTCTGTACAGACT	58670331	True	NA	NA	False	TTTAAA	-29	NA	58671464	58754477	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_58671853_58681169_58681337_58696365_58696488_58700440_58700592_58709377_58709557_58709975_58710073_58710920_58710954_58714082_58714110_58715934_58715968_58723047_58723252_58733396_58733575_58734306_58734382_58735201_58735330_58741864_58742015_58744337_58744496_58745665_58745792_58747404
transcript_95994.known	chr18	+	6696	11	FSM	ENSG00000074657.14	ENST00000336078.8	6696	11	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	71.0299232718155	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGAATTTTTGTTTTTGG	NA	False	NA	4	True	AATAAA	-20	NA	58862599	58986480	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_58863167_58865303_58865386_58865469_58865580_58918270_58920634_58934432_58934615_58939444_58939622_58948066_58948230_58953517_58953800_58979054_58979168_58981469_58981618_58983971
transcript_95999.known	chr18	+	4450	11	FSM	ENSG00000074657.14	ENST00000591230.5	4450	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	81.2578611581673	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTTGTATATATTTAAAT	58863403	False	NA	19	True	ATTAAA	-20	NA	58864090	58984656	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_58864236_58865303_58865386_58865469_58865580_58918270_58920634_58934432_58934615_58939444_58939622_58948066_58948230_58953517_58953800_58979054_58979168_58981469_58981618_58983971
transcript_9600.known	chr1	+	10429	5	FSM	ENSG00000116205.14	ENST00000234827.6	10429	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	4.76313972081441	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGGTGGGCTGCATTTG	54052498	True	NA	NA	False	AATAAA	-17	NA	54053607	54106082	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_54053759_54054380_54054525_54068755_54068898_54088596_54088791_54096284
transcript_96001.known	chr18	+	5324	10	FSM	ENSG00000074657.14	ENST00000591083.5	5324	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	77.2079123431987	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTATTGCAATTGGCCG	58861123	True	NA	NA	False	NA	NA	NA	58862947	58985538	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_58863167_58865469_58865580_58918270_58920634_58934432_58934615_58939444_58939622_58948066_58948230_58953517_58953800_58979054_58979168_58981469_58981618_58983971
transcript_96039.known	chr18	+	569	3	FSM	ENSG00000074657.14	ENST00000590287.5	569	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	95.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCCTTGAAAGGAGATGT	58862333	False	NA	NA	False	AGTAAA	-10	NA	58864408	58918608	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_58864530_58865469_58865580_58918270
transcript_96043.known	chr18	+	727	6	FSM	ENSG00000166562.9	ENST00000299714.7	727	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	324.297024346509	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTTTCTTTTGTGGAC	59131194	True	NA	15	True	AATAAA	-16	NA	59139874	59158832	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_59140036_59149512_59149623_59152535_59152613_59155687_59155808_59157607_59157666_59158631
transcript_96044.known	chr18	+	791	6	FSM	ENSG00000166562.9	ENST00000587834.6	791	6	0	0	0	0	multi-exon	FALSE	canonical	3	757	junction_3	37.2161255371915	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTTTCTTTTGTGGAC	59131203	True	NA	15	True	AATAAA	-16	NA	59139883	59158832	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_59140036_59149512_59149623_59152535_59152686_59155687_59155808_59157607_59157666_59158631
transcript_96045.known	chr18	+	718	5	FSM	ENSG00000166562.9	ENST00000588875.2	718	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_4	327.070615464	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTTTCTTTTGTGGAC	59131218	True	NA	15	True	AATAAA	-16	NA	59139898	59158832	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_59140036_59149512_59149623_59152535_59152686_59155687_59155808_59158631
transcript_96046.known	chr18	+	2054	4	FSM	ENSG00000166562.9	ENST00000509791.7	2054	4	0	0	0	0	multi-exon	FALSE	canonical	3	757	junction_3	37.1872140511882	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTATTCTTTTTGTAC	59131185	True	NA	NA	False	AATAAA	-17	NA	59139865	59157311	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_59140036_59149512_59149623_59152535_59152686_59155687
transcript_96047.known	chr18	+	1088	3	FSM	ENSG00000166562.9	ENST00000585864.1	1088	3	0	0	0	0	multi-exon	FALSE	canonical	3	826	junction_1	8.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTCATTTACCTTTATG	59131203	True	NA	NA	False	AGTAAA	-23	NA	59139883	59153361	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_59140036_59149512_59149623_59152535
transcript_96048.known	chr18	-	4824	13	FSM	ENSG00000074695.6	ENST00000251047.6	4824	13	0	0	0	0	multi-exon	TRUE	canonical	3	473	junction_5	60.936898145176	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTTTCCTTCATTGA	-59349716	True	NA	74	True	AATAAA	-17	NA	59359265	59327822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_59331130_59331417_59331540_59333090_59333245_59338556_59338628_59338759_59338954_59345918_59346052_59347512_59347572_59349112_59349237_59353201_59353302_59354518_59354581_59355312_59355421_59355503_59355659_59359030
transcript_96053.nic	chr18	-	957	8	ISM	ENSG00000074695.6	ENST00000251047.6	4824	13	-33	18148	-33	0	5prime_fragment	FALSE	canonical	3	491	junction_1	48.5441099644941	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAGGAATTCCA	-59359284	False	NA	NA	False	AAAAAG	-45	NA	59359298	59345970	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_59346052_59347512_59347572_59349112_59349237_59353201_59353302_59354518_59354581_59355312_59355421_59355503_59355659_59359030
transcript_96057.nic	chr18	-	876	7	ISM	ENSG00000074695.6	ENST00000251047.6	4824	13	-33	19690	-33	-1542	5prime_fragment	FALSE	canonical	3	510	junction_1	42.5675933075855	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTTTACACATATTTTC	-59359284	False	NA	NA	False	NA	NA	NA	59359298	59347512	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_59347572_59349112_59349237_59353201_59353302_59354518_59354581_59355312_59355421_59355503_59355659_59359030
transcript_96061.known	chr18	-	6403	12	FSM	ENSG00000183287.14	ENST00000649564.1	6403	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_11	14.9633160244072	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCTCTACTGTGTTTTG	-59697406	False	NA	-2	True	NA	NA	NA	59697662	59430938	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_59436142_59438110_59438147_59439542_59439579_59439676_59439817_59447982_59448104_59454850_59454952_59466738_59466892_59469472_59469608_59480185_59480239_59696628_59696710_59697211_59697470_59697576
transcript_96068.known	chr18	+	1899	2	FSM	ENSG00000141682.12	ENST00000316660.7	1899	2	0	0	0	0	multi-exon	FALSE	canonical	3	1321	junction_1	0	722	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTGTGTGTTAATTTT	59875633	True	NA	25	True	ATTAAA	-14	NA	59899995	59904305	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_59900236_59902646
transcript_96071.known	chr18	-	1714	1	FSM	ENSG00000166603.5	ENST00000299766.5	1714	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTCGTGTTATTCATAAG	NA	False	NA	NA	False	ATTAAA	-15	NA	60372775	60371061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_60371100_60372800
transcript_96072.known	chr18	-	653	2	FSM	ENSG00000267279.3	ENST00000586949.1	653	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCAACTGCTTATTTCC	-61606779	True	NA	2	True	AATAAA	-18	NA	61606916	61606067	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_61606655_61606850
transcript_96074.known	chr18	-	7936	31	FSM	ENSG00000197563.11	ENST00000640252.2	7936	31	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_29	35.2584111320342	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTTCTTATGATTTGA	-62183487	True	NA	NA	False	AATAAA	-18	NA	62187056	62041163	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_62045980_62072672_62072726_62074778_62074822_62082672_62082747_62084530_62084607_62085208_62085265_62088755_62088843_62090475_62090579_62095847_62095951_62101074_62101184_62102793_62102903_62105542_62105635_62106788_62106882_62106985_62107086_62109833_62109974_62113133_62113317_62114560_62114640_62138242_62138299_62138982_62139076_62140419_62140480_62143305_62143347_62145908_62146026_62146970_62147102_62148213_62148339_62154544_62154652_62157128_62157228_62157686_62157809_62161132_62161386_62162252_62162330_62163530_62163657_62186843
transcript_96078.known	chr18	-	4456	30	FSM	ENSG00000197563.11	ENST00000400334.7	4456	30	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_28	30.7661966856773	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACTTTATGGTATACCAG	-62183469	True	NA	74	True	NA	NA	NA	62187038	62044548	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_62045980_62072672_62072726_62074778_62074822_62082672_62082747_62084530_62084607_62085208_62085265_62088755_62088843_62090475_62090579_62095847_62095951_62101074_62101184_62102793_62102903_62105542_62105635_62106788_62106882_62106985_62107086_62109833_62109974_62113133_62113317_62114560_62114640_62138242_62138299_62138982_62139076_62140419_62140480_62143305_62143347_62145908_62146026_62146970_62147102_62148213_62148339_62154544_62154652_62157128_62157228_62157686_62157809_62161132_62161386_62163530_62163657_62186843
transcript_9608.known	chr1	-	3276	18	FSM	ENSG00000157216.16	ENST00000610401.5	3276	18	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	38.9643613227164	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTTCCTGACATGTTTG	-54404214	True	NA	-11	True	ATTAAA	-19	NA	54406419	54225432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_54227161_54228254_54228357_54228448_54228478_54228747_54228827_54239128_54239200_54240904_54240960_54241473_54241510_54242163_54242213_54243234_54243300_54251615_54251693_54251793_54251861_54257126_54257187_54258068_54258150_54281437_54281528_54401860_54401946_54404575_54404638_54404857_54404931_54405952
transcript_96081.known	chr18	-	6045	29	FSM	ENSG00000197563.11	ENST00000640876.1	6045	29	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_28	15.1195912913123	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGCCTCCTGGGCTCA	-62183487	True	NA	NA	False	NA	NA	NA	62187056	62042851	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_62045980_62072672_62072726_62074778_62074822_62082672_62082747_62084530_62084607_62085208_62085265_62088755_62088843_62090475_62090579_62095847_62095951_62101074_62101184_62102793_62102903_62105542_62105635_62106788_62106882_62106985_62107086_62109833_62109974_62113133_62113317_62114560_62114640_62138242_62138299_62138982_62139076_62140419_62140480_62143305_62143347_62145908_62146026_62146970_62147102_62148213_62148339_62154544_62154652_62157128_62157228_62157686_62157809_62161132_62161386_62186843
transcript_96088.known	chr18	-	4601	28	FSM	ENSG00000197563.11	ENST00000638977.1	4601	28	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_19	31.2769390059233	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACATTGTAAAGGGTGCTC	-62183487	True	NA	-12	True	AATAAA	-11	NA	62187056	62044235	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_62045980_62072672_62072726_62074778_62074822_62082672_62082747_62084530_62084607_62085208_62085265_62088755_62088843_62090475_62090579_62095847_62095951_62101074_62101184_62102793_62102903_62105542_62105635_62106788_62106882_62106985_62107086_62109833_62109974_62113133_62113317_62114560_62114640_62138242_62138299_62138982_62139076_62143305_62143347_62145908_62146026_62146970_62147102_62148213_62148339_62154544_62154652_62157128_62157228_62157686_62157809_62161132_62161386_62186843
transcript_96093.known	chr18	-	4195	26	FSM	ENSG00000197563.11	ENST00000638167.1	4195	26	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_14	32.6949537390711	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTACAACATTGTAAAGG	-62183429	True	NA	-18	True	AATAAA	-5	NA	62186998	62044241	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_62045980_62072672_62072726_62074778_62074822_62082672_62082747_62084530_62084607_62085208_62085265_62088755_62088843_62090475_62090579_62095847_62095951_62101074_62101184_62102793_62102903_62105542_62105635_62106788_62106882_62106985_62107086_62138242_62138299_62138982_62139076_62140419_62140480_62143305_62143347_62145908_62146026_62146970_62147102_62148213_62148339_62154544_62154652_62157128_62157228_62157686_62157809_62161132_62161386_62186843
transcript_96095.known	chr18	-	2177	16	FSM	ENSG00000197563.11	ENST00000589339.6	2177	16	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_14	46.9393935481347	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTACAACTGGTCAGAAAAC	-62183459	True	NA	NA	False	NA	NA	NA	62187028	62112810	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_62113317_62114560_62114640_62138242_62138299_62138982_62139076_62140419_62140480_62143305_62143347_62145908_62146026_62146970_62147102_62148213_62148339_62154544_62154652_62157128_62157228_62157686_62157809_62161132_62161386_62162252_62162330_62163530_62163657_62186843
transcript_96096.known	chr18	-	2367	15	FSM	ENSG00000197563.11	ENST00000638329.1	2367	15	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_13	41.9139667920479	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAATTAAAAAAATCTCT	-62183480	True	NA	NA	False	NA	NA	NA	62187049	62112564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_62113317_62114560_62114640_62138242_62138299_62138982_62139076_62140419_62140480_62143305_62143347_62145908_62146026_62146970_62147102_62148213_62148339_62154544_62154652_62157128_62157228_62157686_62157809_62161132_62161386_62163530_62163657_62186843
transcript_96101.known	chr18	-	1853	5	FSM	ENSG00000197563.11	ENST00000589720.6	1853	5	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_4	21.901769334919	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCTGGCCTGATTTTCAT	-62183446	True	NA	NA	False	NA	NA	NA	62187015	62153444	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_62154652_62157128_62157228_62157686_62157809_62161132_62161386_62186843
transcript_96103.known	chr18	+	5579	30	FSM	ENSG00000134444.15	ENST00000256858.10	5579	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	36.4410490992374	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTTGATTTGGTTTGG	62184285	True	NA	15	True	AATAAA	-13	NA	62187257	62307112	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_62188032_62211152_62211243_62221036_62221109_62221218_62221275_62221383_62221498_62227288_62227493_62227597_62227690_62228304_62228599_62231193_62231270_62232331_62232428_62244763_62244877_62252663_62252755_62255406_62255479_62257947_62258089_62258511_62258677_62261510_62261659_62263988_62264146_62264728_62264853_62266700_62266750_62268868_62268949_62269410_62269513_62273979_62274087_62275373_62275474_62279773_62279857_62280645_62280710_62282305_62282445_62287350_62287468_62291542_62291632_62298789_62298861_62305413
transcript_96105.known	chr18	+	8617	29	FSM	ENSG00000134444.15	ENST00000644646.2	8617	29	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_7	11.9697748602086	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTCTAATTTATTTTT	62184282	True	NA	NA	False	ATTAAA	-38	NA	62187254	62310249	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_62188032_62211152_62211243_62221036_62221109_62221218_62221275_62221383_62221498_62227288_62227493_62227597_62227690_62228304_62228599_62231193_62231270_62232331_62232428_62244763_62244877_62252663_62252755_62255406_62255479_62257947_62258089_62258511_62258677_62261510_62261659_62263988_62264146_62264728_62264853_62266700_62266750_62268868_62268949_62273979_62274087_62275373_62275474_62279773_62279857_62280645_62280710_62282305_62282445_62287350_62287468_62291542_62291632_62298789_62298861_62305413
transcript_9611.known	chr1	-	2784	17	FSM	ENSG00000157216.16	ENST00000371319.8	2784	17	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_12	47.7229962910964	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTTCCTGACATGTTTG	-54405995	False	NA	-11	True	ATTAAA	-19	NA	54406008	54225432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_54227161_54228254_54228357_54228448_54228478_54228747_54228827_54239128_54239200_54240904_54240960_54241473_54241510_54242163_54242213_54243234_54243300_54251615_54251693_54251793_54251861_54257126_54257187_54281437_54281528_54401860_54401946_54404575_54404638_54404857_54404931_54405952
transcript_96113.known	chr18	+	3268	22	FSM	ENSG00000134444.15	ENST00000587725.5	3268	22	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_19	30.9994513886062	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTATGTTGATATATATT	62184318	True	NA	96	True	AATAAA	-16	NA	62187290	62275571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_62188032_62211152_62211243_62221036_62221109_62221218_62221275_62221383_62221498_62227288_62227493_62227597_62227690_62228304_62228599_62231193_62231270_62232331_62232428_62244763_62244877_62252663_62252755_62255406_62255479_62257947_62258089_62258511_62258677_62261510_62261659_62263988_62264146_62264728_62264853_62266700_62266750_62268880_62268949_62273979_62274087_62275373
transcript_96120.nic	chr18	+	1402	2	ISM	ENSG00000134444.15	ENST00000587725.5	3268	22	-36	63794	0	-15673	5prime_fragment	FALSE	canonical	3	138	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAGCAAATAAATAAATAAA	62184282	True	NA	NA	False	AATAAA	-1	NA	62187254	62211777	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_+_62188032_62211152
transcript_96124.known	chr18	+	8148	10	FSM	ENSG00000141655.17	ENST00000586569.3	8148	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	2.29868454061969	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTGTGGATGTGTGCTTT	62324809	True	NA	NA	False	AATAAA	-14	NA	62325309	62391288	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_62325428_62348167_62348250_62349811_62349938_62354390_62354535_62358247_62358342_62359954_62360050_62361679_62361794_62366707_62366761_62368700_62369485_62384750
transcript_96133.known	chr18	+	6299	17	FSM	ENSG00000081913.14	ENST00000262719.10	6299	17	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_11	9.55820982192795	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACAAGTATCTGCTTTTG	62715380	False	NA	24	True	AATAAA	-18	NA	62715540	62980433	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_62717260_62830034_62830232_62838783_62838910_62860434_62860602_62895010_62895158_62895780_62896012_62902963_62903167_62905223_62905285_62914912_62915009_62919958_62920115_62941717_62941919_62945108_62945272_62958628_62958760_62963367_62963473_62972513_62972709_62975396_62975626_62978261
transcript_96138.known	chr18	-	5143	10	FSM	ENSG00000119537.18	ENST00000645214.2	5143	10	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_5	13.4421485642992	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTTATCTAGAAGTTTG	-63364037	True	NA	-4	True	AATAAA	-29	NA	63367206	63327725	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_63331902_63335256_63335359_63338799_63338884_63344409_63344494_63350887_63351080_63355203_63355300_63355497_63355564_63359735_63359793_63362778_63362869_63367010
transcript_96142.known	chr18	-	1378	9	FSM	ENSG00000119537.18	ENST00000591902.6	1378	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	45.3293503152207	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACCTTCCATAAAAAAACAA	-63364031	True	NA	75	True	CATAAA	-23	NA	63367200	63331382	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_63331902_63338799_63338884_63344409_63344494_63350887_63351080_63355203_63355300_63355497_63355564_63359735_63359793_63362778_63362869_63367010
transcript_96146.known	chr18	-	553	6	FSM	ENSG00000119537.18	ENST00000592327.1	553	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	56.5345911809752	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCGCCGGGTGGGCAGGA	-63364035	True	NA	NA	False	NA	NA	NA	63367204	63351014	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_63351080_63355218_63355300_63355497_63355564_63359735_63359793_63362778_63362869_63367010
transcript_96147.known	chr18	+	785	2	FSM	ENSG00000267390.2	ENST00000589905.2	820	2	33	2	33	-2	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTGAGTGGTTTATTAT	63367286	True	NA	NA	False	AATAAA	-21	NA	63367327	63381629	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_63367860_63381376
transcript_96148.known	chr18	-	3337	11	FSM	ENSG00000119541.10	ENST00000238497.10	3337	11	0	0	0	0	multi-exon	TRUE	canonical	3	291	junction_5	21.2953046467995	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTTTTTCAATGACTTT	-63417468	True	NA	0	True	ATTAAA	-23	NA	63422476	63389189	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_63391077_63393408_63393550_63397033_63397254_63399241_63399324_63400047_63400197_63400546_63400704_63403706_63403827_63407431_63407500_63410289_63410447_63411466_63411579_63422232
transcript_96154.nic	chr18	-	482	3	ISM	ENSG00000119541.10	ENST00000591519.1	551	4	-105	2964	-12	-2964	5prime_fragment	FALSE	canonical	3	319	junction_2	3.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCACAGAAGCCAGTGAAAGA	-63417487	True	NA	NA	False	AATAAA	-10	NA	63422495	63410339	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr18_-_63410447_63411466_63411579_63422232
transcript_96155.known	chr18	-	1707	8	FSM	ENSG00000206073.11	ENST00000341074.10	1707	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	1.98976975388345	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGCTTTACCTGTTTTC	-63644183	True	NA	NA	False	AATAAA	-18	NA	63644256	63637258	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_63638124_63639184_63639341_63639633_63639777_63640873_63640992_63641759_63641889_63643160_63643218_63643412_63643604_63644208
transcript_96156.known	chr18	-	1707	8	FSM	ENSG00000057149.16	ENST00000283752.10	1707	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.97948663722157	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCTTTACATTTTCTC	-63661837	True	NA	NA	False	AATAAA	-18	NA	63661893	63655196	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_63656062_63656830_63656987_63657269_63657413_63658512_63658631_63659398_63659528_63660799_63660857_63661051_63661243_63661845
transcript_96158.known	chr18	+	3321	7	FSM	ENSG00000166401.15	ENST00000397985.7	3321	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	2.62466929133727	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTTGTATGGACATATG	63970039	True	NA	NA	False	AATAAA	-26	NA	63970080	63989374	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_63970171_63978298_63978477_63979800_63979939_63981720_63981839_63983578_63983722_63985092_63985246_63986873
transcript_96162.known	chr18	+	2102	4	FSM	ENSG00000221887.6	ENST00000408945.5	2102	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	8.05536398239638	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCCAGTGTGTCATGCC	63948856	True	NA	16	True	AATAAA	-16	NA	63949300	63961835	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_63949401_63953353_63953528_63954407_63954558_63960157
transcript_96165.known	chr18	+	12136	12	FSM	ENSG00000081138.14	ENST00000397968.4	12136	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	1.19226154987309	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTCTGTGTTTTCATT	65750995	True	NA	NA	False	ATTAAA	-15	NA	65751011	65890337	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_65751151_65762646_65763053_65809703_65809999_65814484_65814605_65822080_65822249_65824643_65824832_65843811_65844066_65857815_65857953_65858924_65859047_65859707_65859826_65862665_65862918_65880400
transcript_96167.known	chr18	-	9266	2	FSM	ENSG00000171451.15	ENST00000310045.9	9266	2	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTCTATGATTGGGATAA	NA	False	NA	-10	True	AATAAA	-14	NA	67516720	67506586	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_67515493_67516360
transcript_96172.known	chr18	-	4737	16	FSM	ENSG00000166479.10	ENST00000299608.7	4737	16	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_7	17.3789144271634	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTCTTATTTTTACTGT	-68712762	True	NA	0	True	AATAAA	-19	NA	68715108	68673687	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_68677194_68679462_68679532_68680980_68681111_68682924_68682982_68684189_68684244_68684427_68684486_68687666_68687766_68691294_68691362_68697225_68697304_68697931_68698032_68700404_68700486_68701744_68701791_68710020_68710145_68711363_68711404_68713845_68713901_68714935
transcript_96177.known	chr18	-	1509	15	FSM	ENSG00000166479.10	ENST00000564631.5	1509	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_11	40.2234194144127	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGTTATTCGTATTTTG	-68712731	True	NA	NA	False	NA	NA	NA	68715077	68676838	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_68677194_68679462_68679532_68680980_68681111_68682924_68682982_68684189_68684244_68684427_68684486_68687666_68687766_68691294_68691362_68697225_68697304_68697931_68698032_68700404_68700486_68710020_68710145_68711363_68711404_68713845_68713901_68714935
transcript_96178.known	chr18	-	937	8	FSM	ENSG00000166479.10	ENST00000562706.5	937	8	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_4	18.2029376413674	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTTACAAGTGGTGGAT	-68712712	True	NA	NA	False	AATAAA	-36	NA	68715058	68696935	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_68697304_68697931_68698032_68700404_68700486_68701744_68701791_68710020_68710145_68711363_68711404_68713845_68713901_68714935
transcript_96181.known	chr18	+	597	3	FSM	ENSG00000150636.17	ENST00000582077.5	597	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	5.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACCAAGTCTGTATTT	68714996	True	NA	NA	False	AATAAA	-15	NA	68715208	68718130	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_68715612_68716527_68716595_68718003
transcript_96182.known	chr18	+	9057	8	FSM	ENSG00000206052.11	ENST00000382713.10	9057	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	5.54020555133295	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTACCGATAATTTATTAT	69400629	True	NA	NA	False	AATAAA	-29	NA	69400887	69849087	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_69401311_69564486_69564595_69599383_69599499_69677733_69677854_69698403_69698594_69738964_69739104_69757755_69757874_69841243
transcript_96184.known	chr18	-	7830	49	FSM	ENSG00000176225.15	ENST00000640769.2	7830	49	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_36	9.84142940018821	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGGAGGAACAAGCTCTA	-70204038	True	NA	NA	False	NA	NA	NA	70205687	70003030	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_70004237_70005197_70005268_70006380_70006485_70017406_70017675_70020614_70020818_70024721_70024849_70028723_70028802_70030011_70030110_70030875_70030982_70047970_70048189_70051410_70051549_70054130_70054285_70057741_70057833_70059849_70060043_70065828_70065923_70073905_70073995_70075351_70075542_70086612_70086685_70087988_70088148_70092109_70092221_70092675_70092805_70109497_70109718_70114444_70114600_70121555_70121701_70127501_70127742_70128357_70128547_70134472_70134542_70135183_70135281_70139598_70139717_70140099_70140189_70142287_70142388_70145611_70145784_70148900_70149038_70149970_70150088_70150607_70150734_70166061_70166189_70166918_70167032_70168854_70169068_70176674_70176846_70188107_70188224_70190537_70190720_70193287_70193454_70196500_70196649_70197623_70197739_70199413_70199505_70201893_70201984_70204085_70204264_70205127_70205316_70205627
transcript_96189.known	chr18	+	5703	2	FSM	ENSG00000170677.6	ENST00000397942.4	5703	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTTGTAGTCTACTTA	70287446	True	NA	6	True	AATAAA	-18	NA	70289044	70330199	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_70289091_70324542
transcript_9619.known	chr1	-	2642	8	FSM	ENSG00000215883.11	ENST00000528287.5	2642	8	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	16.3682120998886	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTGCTGTGTCACATT	-54198583	True	NA	NA	False	ACTAAA	-16	NA	54200036	54173217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_54174823_54179148_54179353_54184160_54184266_54187651_54187740_54190737_54190897_54195418_54195716_54196368_54196492_54199975
transcript_96194.known	chr18	-	2357	11	FSM	ENSG00000166342.19	ENST00000583169.5	2357	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	21.6030090496671	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCTGTGTCTGGATGAT	-72867553	False	NA	NA	False	CATAAA	-23	NA	72867575	72742313	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_72742771_72749013_72749089_72750061_72750621_72756033_72756148_72783677_72783907_72794116_72794245_72794362_72794405_72858825_72859075_72864807_72864946_72865187_72865242_72867263
transcript_96197.known	chr18	-	6721	11	FSM	ENSG00000166342.19	ENST00000327305.11	6721	11	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	16.0564628732483	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATTTGTACTCTTTATT	-72866696	True	NA	-2	True	AATAAA	-23	NA	72867987	72743755	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_72748165_72749013_72749089_72750061_72750621_72756033_72756148_72783677_72783907_72794116_72794245_72794362_72794405_72858825_72859075_72864807_72864946_72865187_72865242_72867263
transcript_9620.known	chr1	+	1483	7	FSM	ENSG00000116221.15	ENST00000360840.9	1483	7	0	0	0	0	multi-exon	FALSE	canonical	3	1581	junction_2	37.1468557066259	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTTTGGTATGAGGG	54180124	True	NA	23	True	AATAAA	-22	NA	54200166	54218383	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_54200590_54205017_54205202_54205294_54205411_54209945_54210132_54212500_54212659_54216140_54216345_54218171
transcript_96207.known	chr18	+	3084	6	FSM	ENSG00000075336.12	ENST00000169551.11	3084	6	0	0	0	0	multi-exon	TRUE	canonical	3	457	junction_2	22.4	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGATTGTGGTGTCTCTG	74142561	True	NA	NA	False	ACTAAA	-39	NA	74148522	74160531	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_74149110_74155144_74155208_74155305_74155404_74158013_74158088_74158170_74158277_74158375
transcript_96221.known	chr18	-	776	6	FSM	ENSG00000166347.19	ENST00000494131.6	776	6	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_2	1186.92537254875	980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCACCGTGTTTGCCTGTT	-74277489	True	NA	-10	True	AATATA	-16	NA	74291935	74253296	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_74253666_74255740_74255776_74256829_74256854_74260914_74260945_74263348_74263478_74291746
transcript_96226.known	chr18	-	718	5	FSM	ENSG00000166347.19	ENST00000299438.13	718	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_4	1017.03171042008	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACCGTGTTTGCCTGTTT	-74276595	False	NA	-9	True	AATATA	-17	NA	74291041	74253295	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_74253666_74255740_74255776_74260914_74260945_74263348_74263478_74290887
transcript_96227.known	chr18	-	3231	5	FSM	ENSG00000166347.19	ENST00000340533.9	3231	5	0	0	0	0	multi-exon	FALSE	canonical	3	2345	junction_2	44.4325331260778	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGGACTTGCCCTGAATT	-74277517	True	NA	-6	True	AATAAA	-18	NA	74291963	74250845	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_74253666_74255740_74255776_74260914_74260945_74263348_74263478_74291746
transcript_9623.known	chr1	+	1582	7	FSM	ENSG00000116221.15	ENST00000605337.5	1582	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_6	595.281352713899	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAACATATATCGTACACA	54180153	True	NA	-3	True	AATAAA	-6	NA	54200195	54225464	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_54200590_54205017_54205202_54205294_54205411_54209945_54210132_54212500_54212659_54216140_54216345_54225124
transcript_96242.known	chr18	+	2653	12	FSM	ENSG00000133313.15	ENST00000579847.5	2653	12	0	0	0	0	multi-exon	TRUE	canonical	1	338	junction_1	416.920389967015	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATCTCAGTTGCTCGTC	74478052	True	NA	21	True	AATAAA	-30	NA	74496306	74521131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_74496432_74499936_74500034_74501328_74501473_74505848_74506012_74508839_74508929_74510812_74511014_74512447_74512533_74513558_74513720_74516227_74516393_74518498_74518641_74518948_74519097_74519998
transcript_96250.known	chr18	+	4975	12	FSM	ENSG00000133313.15	ENST00000324262.9	4975	12	0	0	0	0	multi-exon	FALSE	canonical	1	454	junction_9	311.175005901053	1981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGGACCAGTTTTTTTTA	74478108	True	NA	NA	False	AATAAA	-24	NA	74496362	74523454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_74496432_74499881_74500034_74501328_74501473_74505848_74506012_74508839_74508929_74510812_74511014_74512447_74512533_74513558_74513720_74516227_74516393_74518498_74518641_74518948_74519097_74519998
transcript_9629.known	chr1	-	3339	7	FSM	ENSG00000215883.11	ENST00000421415.5	3339	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	12.6940493495531	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTAACCTTATGTGGTGGT	-54198557	True	NA	NA	False	NA	NA	NA	54200010	54172335	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_54174823_54179148_54179353_54184160_54184266_54187651_54187740_54195418_54195716_54196368_54196492_54199975
transcript_96304.known	chr18	+	2349	9	FSM	ENSG00000133313.15	ENST00000324301.12	2349	9	0	0	0	0	multi-exon	FALSE	canonical	1	49	junction_2	535.299390528329	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCTCCATCTCAGTTGCTC	74481606	False	NA	18	True	AATAAA	-27	NA	74499860	74521128	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_74500034_74501328_74501473_74510812_74511014_74512447_74512533_74513558_74513720_74516227_74516393_74518498_74518641_74518948_74519097_74519998
transcript_96306.known	chr18	+	8071	9	FSM	ENSG00000215421.10	ENST00000299687.10	8071	9	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	3.80788655293195	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGATGGCATGTTATTTTC	74597296	True	NA	8	True	AATAAA	-19	NA	74597869	75065671	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_74597938_74630966_74635707_74641007_74641123_74781427_74781503_74877196_74877364_74881035_74881120_74889917_74890039_74920513_74920693_75063149
transcript_96307.known	chr18	-	2418	2	FSM	ENSG00000264247.2	ENST00000652782.1	2418	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGACTTTGTGTTAACTAG	-74597509	True	NA	NA	False	AATAAA	-21	NA	74597833	74592827	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_74593840_74596427
transcript_96308.known	chr18	-	7518	2	FSM	ENSG00000180011.7	ENST00000322342.4	7518	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATCATGTGTAGAGCGT	-75208994	False	NA	NA	False	AATAAA	-15	NA	75209139	75195112	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_75202341_75208849
transcript_9631.nic	chr1	+	3333	6	ISM	ENSG00000116221.15	ENST00000360840.9	1483	7	-31	8	-31	-6	intron_retention	FALSE	canonical	3	1581	junction_2	39.3273441767938	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGAAGCCTGTGTTTGG	54180093	True	NA	15	True	AATAAA	-14	NA	54200135	54218375	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_54200590_54205017_54205202_54205294_54205411_54209945_54210132_54212500_54212659_54216140
transcript_96320.known	chr18	+	1200	2	FSM	ENSG00000265778.4	ENST00000581996.3	1225	2	23	2	23	-2	multi-exon	FALSE	canonical	3	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGCTGCGCAAGTTGATC	76491519	True	NA	NA	False	AATAAA	-25	NA	76491651	76493918	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_76491690_76492756
transcript_96321.known	chr18	+	2246	3	FSM	ENSG00000266256.3	ENST00000578613.6	2246	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGTAGTCATTGCATAAT	NA	False	NA	5	True	AATAAA	-19	NA	76528651	76559827	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_76528964_76530383_76530465_76557974
transcript_96323.known	chr18	-	2738	9	FSM	ENSG00000197971.16	ENST00000355994.7	2738	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	20.7059019364045	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCATGGGTGTCTTCTTT	-77131311	True	NA	1	True	AATAAA	-21	NA	77132783	76978832	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_76980472_76984774_76984895_76988494_76988528_76988876_76988913_76989955_76990061_77016831_77017269_77066297_77066386_77105210_77105287_77132579
transcript_96326.known	chr18	-	4844	4	FSM	ENSG00000197971.16	ENST00000397860.7	4844	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	4.32049379893857	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCATGCGAACTTCTTTAA	-77131297	True	NA	3	True	ATTAAA	-31	NA	77132769	77012778	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_77017269_77066297_77066386_77105210_77105287_77132579
transcript_96327.known	chr18	-	531	4	FSM	ENSG00000197971.16	ENST00000490754.5	531	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	18.4028983224563	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCGACGAGCTCCAGACCA	-77133651	False	NA	NA	False	NA	NA	NA	77133683	77017069	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_77017269_77066297_77066386_77105210_77105287_77133515
transcript_96333.known	chr18	+	10749	3	FSM	ENSG00000166573.6	ENST00000299727.5	10749	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTAGTTTAAGAGTGTG	77249835	False	NA	NA	False	AATAAA	-16	NA	77249847	77277900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_77251215_77256157_77256224_77268584
transcript_9634.known	chr1	+	1179	5	FSM	ENSG00000116221.15	ENST00000336230.10	1179	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	708.875870657198	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGTGTTTGGTATGAG	54180124	True	NA	21	True	AATAAA	-20	NA	54200166	54218381	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_54200590_54209947_54210132_54212500_54212659_54216140_54216345_54218171
transcript_96341.nic	chr18	-	2484	3	NIC	ENSG00000263146.3	novel	471	2	NA	NA	-649	-6	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	30.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGAGTTGCAACCATAGA	NA	False	NA	-5	True	AATAAA	-17	NA	78979723	78976813	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_78977430_78977554_78978739_78979039
transcript_96346.known	chr18	+	4361	30	FSM	ENSG00000166377.21	ENST00000426216.6	4361	30	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_28	16.5552438786354	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTCTTCTCACACACTCT	79069081	True	NA	22	True	AGTAAA	-31	NA	79069393	79378283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_79069530_79096475_79096650_79110354_79110506_79113240_79113355_79126266_79126376_79143801_79143861_79154503_79154556_79176812_79176908_79193182_79193264_79206936_79207013_79213961_79214039_79253380_79253542_79277053_79277197_79303603_79303717_79306985_79307235_79329140_79329303_79330011_79330105_79336627_79336712_79337278_79337450_79342267_79342367_79344264_79344355_79345427_79345573_79345774_79345840_79347769_79347926_79348131_79348197_79359353_79359463_79372824_79372883_79373897_79374102_79375393_79375427_79377246
transcript_9635.nic	chr1	+	3143	16	NIC	ENSG00000162390.18	novel	2875	15	NA	NA	-198	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_9	3.35062183283442	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTTGTTTCAGCTCTT	NA	False	NA	9	True	TATAAA	-18	NA	54542058	54610124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_54542438_54584654_54584863_54585834_54585905_54592545_54592607_54593940_54594040_54594555_54594692_54597258_54597416_54599295_54599416_54601268_54601414_54602668_54602725_54603870_54603938_54604345_54604430_54605075_54605210_54607133_54607266_54607941_54608069_54608956
transcript_96351.known	chr18	+	4329	29	FSM	ENSG00000166377.21	ENST00000307671.12	4329	29	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_8	12.4040706781183	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCTCACACACTCTAAAG	79069084	True	NA	26	True	AGTAAA	-35	NA	79069396	79378287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_79069530_79096475_79096650_79110354_79110506_79113240_79113355_79126266_79126376_79143801_79143861_79154503_79154556_79176812_79176908_79193182_79193264_79206936_79207013_79213961_79214039_79253380_79253542_79277053_79277197_79303603_79303717_79306985_79307235_79329140_79329303_79330011_79330105_79336627_79336712_79337278_79337450_79342267_79342367_79344264_79344355_79345427_79345573_79345774_79345840_79347769_79347926_79348131_79348197_79359353_79359463_79372824_79372883_79373897_79374102_79377246
transcript_96373.known	chr18	+	1650	5	FSM	ENSG00000166377.21	ENST00000586722.5	1650	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	28.2079332812597	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAACAACCCCATCAAAAAG	79069095	True	NA	NA	False	AAGAAA	-5	NA	79069407	79116082	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_79069530_79096475_79096650_79110354_79110506_79113240_79113355_79114993
transcript_96376.known	chr18	+	4642	10	FSM	ENSG00000131196.18	ENST00000253506.9	4642	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	30.9591526983939	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTAGTCTGCGAGTGGTT	NA	False	NA	18	True	AATAAA	-22	NA	79395855	79529325	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_79396352_79410402_79411502_79433578_79433739_79448781_79448985_79450953_79451127_79451675_79451817_79461310_79461367_79467449_79467583_79486247_79486631_79527527
transcript_96377.known	chr18	+	4302	10	FSM	ENSG00000131196.18	ENST00000318065.9	4302	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_9	24.2201834004331	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCGTAGTCTGCGAGTGG	79399647	True	NA	16	True	AATAAA	-20	NA	79400321	79529323	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_79400480_79410402_79411502_79433578_79433739_79448781_79448985_79450953_79451127_79451675_79451817_79461310_79461367_79467449_79467583_79486247_79486631_79527527
transcript_96378.known	chr18	+	4595	10	FSM	ENSG00000131196.18	ENST00000329101.8	4595	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_9	25.7384757863101	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCGTAGTCTGCGAGTGG	79399661	True	NA	16	True	AATAAA	-20	NA	79400335	79529323	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_79400480_79410402_79411502_79433578_79433739_79448781_79448985_79450953_79451127_79451675_79451817_79461310_79461367_79467449_79467583_79486247_79486938_79527527
transcript_96382.known	chr18	+	2103	9	FSM	ENSG00000131196.18	ENST00000586434.1	2103	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	30.0572370653059	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCACATTGGAGCACTCA	79399717	False	NA	NA	False	AATGAA	-43	NA	79400391	79527577	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_79400480_79410402_79411502_79433578_79433739_79448781_79448985_79450953_79451127_79451675_79451817_79461310_79461367_79467449_79467583_79527527
transcript_96383.known	chr18	+	2195	8	FSM	ENSG00000131196.18	ENST00000587635.5	2195	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	37.3543429707378	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTTGCACATTTAACTGT	79396111	True	NA	NA	False	NA	NA	NA	79396130	79467676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_79396352_79410402_79411502_79433578_79433739_79448781_79448985_79450953_79451042_79451675_79451817_79461310_79461367_79467449
transcript_96384.known	chr18	+	4819	8	FSM	ENSG00000131196.18	ENST00000591814.5	4819	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	26.9587742711734	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGGTATCCGTGTTCCG	79395494	True	NA	NA	False	AATAAA	-19	NA	79395929	79470014	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_79396352_79410402_79411502_79433578_79433739_79448781_79448985_79450953_79451127_79451675_79451817_79461310_79461367_79467449
transcript_96389.known	chr18	+	2531	8	FSM	ENSG00000131196.18	ENST00000592223.5	2531	8	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	7.62915995589639	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTGATGTGGTCTTTAA	79399658	True	NA	19	True	AATAAA	-19	NA	79400332	79468001	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_79400480_79410402_79411502_79433578_79433739_79448781_79448985_79450953_79451127_79451675_79451817_79461310_79461367_79467449
transcript_96393.known	chr18	-	2072	1	FSM	ENSG00000274828.1	ENST00000616428.1	2072	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTCTAAAGTTTTCCT	NA	False	NA	-2	True	ATTAAA	-14	NA	79679358	79677286	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_79677300_79679400
transcript_96398.known	chr18	+	3744	13	FSM	ENSG00000060069.18	ENST00000613122.5	3744	13	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_10	20.6067680359849	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTCTTCTCGTGGGTGTG	79679789	False	NA	19	True	AATAAA	-15	NA	79679802	79754503	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_79680262_79695224_79695309_79695976_79696071_79697859_79697989_79704766_79704918_79710345_79710437_79712971_79713139_79714490_79715529_79717534_79717677_79717809_79718017_79728906_79729070_79736354_79736522_79753651
transcript_9640.nnic	chr1	+	2787	16	NNC	ENSG00000162390.18	novel	515	2	NA	NA	16356	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	4.06283972938469	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTTGTTTCAGCTCTT	54564492	True	NA	9	True	TATAAA	-18	NA	54564583	54610124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_54564607_54584654_54584863_54585834_54585905_54592545_54592607_54593940_54594040_54594555_54594692_54597258_54597416_54599295_54599416_54601268_54601414_54602668_54602725_54603870_54603938_54604345_54604430_54605075_54605210_54607133_54607266_54607941_54608069_54608956
transcript_96405.known	chr18	+	3538	12	FSM	ENSG00000060069.18	ENST00000075430.11	3538	12	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_10	43.7056268480595	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTCTTCTCGTGGGTGTG	79679832	False	NA	19	True	AATAAA	-15	NA	79679845	79754503	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_79680262_79695224_79695309_79695976_79696071_79697859_79697989_79704766_79704918_79710345_79710437_79712971_79713139_79714490_79715529_79717534_79717677_79717809_79718017_79736354_79736522_79753651
transcript_9641.known	chr1	+	2875	15	FSM	ENSG00000162390.18	ENST00000481208.5	2875	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.54512521998087	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTTGTTTCAGCTCTT	54542176	True	NA	9	True	TATAAA	-18	NA	54542256	54610124	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_54542438_54584654_54584863_54592545_54592607_54593940_54594040_54594555_54594692_54597258_54597416_54599295_54599416_54601268_54601414_54602668_54602725_54603870_54603938_54604345_54604430_54605075_54605210_54607133_54607266_54607941_54608069_54608956
transcript_96411.known	chr18	+	3228	12	FSM	ENSG00000060069.18	ENST00000591598.5	3228	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_11	60.0393810155241	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTCTTCTCGTGGGTGTG	79680114	True	NA	19	True	AATAAA	-15	NA	79680151	79754503	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_79680262_79695224_79695309_79695976_79696071_79697859_79697989_79704766_79704918_79710345_79710437_79712971_79713139_79714490_79715529_79717534_79717677_79717809_79718017_79728906_79729070_79753651
transcript_96418.nic	chr18	+	3445	11	NIC	ENSG00000060069.18	novel	3538	12	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_10	62.4215507657412	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTCTCTTCTCGTGGG	79679754	False	NA	15	True	AATAAA	-11	NA	79679767	79754499	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_+_79680262_79695224_79695309_79695976_79696071_79697859_79697989_79704766_79704918_79710345_79710437_79712971_79713139_79714490_79715529_79717534_79717677_79717809_79718017_79753651
transcript_96436.known	chr18	-	2544	6	FSM	ENSG00000122490.19	ENST00000397778.7	2544	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	76.5584743839635	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGCCTTGGGCAGAGGGA	-79950852	True	NA	-23	True	AATAAA	-18	NA	79951653	79902419	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_79904184_79919183_79919401_79933968_79934023_79943328_79943463_79950723_79951026_79951580
transcript_96446.known	chr18	-	2475	5	FSM	ENSG00000122490.19	ENST00000357575.8	2475	5	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_2	38.1665756913035	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGCCTTGGGCAGAGGGA	-79950837	True	NA	-23	True	AATAAA	-18	NA	79951638	79902419	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_79904184_79919183_79919401_79943328_79943463_79950723_79951026_79951580
transcript_96448.known	chr18	-	2319	5	FSM	ENSG00000122490.19	ENST00000474967.5	2319	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	58.1909572012697	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCACATTAAACTGTCGC	-79950856	True	NA	-50	True	NA	NA	NA	79951657	79902514	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_79904184_79943328_79943463_79949518_79949656_79950723_79951026_79951580
transcript_96454.known	chr18	-	1247	4	FSM	ENSG00000122490.19	ENST00000590381.5	1247	4	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	47.7656315310031	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCGGCTGTGCGGACGC	-79950852	True	NA	NA	False	GGGGCT	-22	NA	79951653	79903445	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_79904184_79943328_79943463_79950723_79951026_79951580
transcript_96457.known	chr18	+	689	4	FSM	ENSG00000226742.4	ENST00000451882.3	689	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	3.74165738677394	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTATCTTTTTCTGGT	79964542	True	NA	27	True	AATAAA	-32	NA	79964642	79970822	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_79964787_79966611_79966679_79968088_79968184_79970439
transcript_96459.nic	chr18	-	1058	4	NIC	ENSG00000141759.15	novel	988	5	NA	NA	-12	1	combination_of_known_junctions	FALSE	canonical	3	160	junction_2	579.940226805027	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGCGTTTTGCATACT	-79959122	True	NA	-7	True	AGTAAA	-22	NA	79988593	79973405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_79973857_79977597_79977702_79986601_79986751_79988239
transcript_9646.known	chr1	-	1975	8	FSM	ENSG00000162391.12	ENST00000302250.7	1975	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTGTATGTGAGTCCTT	NA	False	NA	NA	False	AATAAA	-19	NA	54623525	54609180	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_54609942_54610411_54610556_54611605_54611746_54612485_54612711_54614699_54614860_54616019_54616173_54619863_54620008_54623277
transcript_96461.nic	chr18	-	951	4	NIC	ENSG00000141759.15	novel	988	5	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	160	junction_2	579.940226805027	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCCTACTTGTTTGTTC	-79959122	True	NA	-11	True	AATAAA	-20	NA	79988593	79973512	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr18_-_79973857_79977597_79977702_79986601_79986751_79988239
transcript_96462.known	chr18	-	3472	3	FSM	ENSG00000141759.15	ENST00000269601.10	3472	3	0	0	0	0	multi-exon	FALSE	canonical	3	1188	junction_2	108	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTAAGTTTATTGTAT	-79959092	True	NA	-18	True	GATAAA	-15	NA	79988563	79970812	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_79973857_79977597_79977702_79988239
transcript_96463.known	chr18	-	1185	3	FSM	ENSG00000141759.15	ENST00000585474.5	1185	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	678	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGAATAGGAGAGCTAT	-80033764	True	NA	-6	True	AATAAA	-22	NA	80033949	79972874	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_79973857_79977597_79977702_80033850
transcript_96467.known	chr18	-	752	2	FSM	ENSG00000141759.15	ENST00000588162.1	752	2	0	0	0	0	multi-exon	FALSE	canonical	3	693	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGTGCGTTTTGCATAC	-79959070	True	NA	-8	True	AGTAAA	-21	NA	79988541	79973406	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_79973857_79988239
transcript_96477.known	chr18	+	5590	7	FSM	ENSG00000101546.13	ENST00000306735.10	5590	7	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_4	10.9239797387826	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTCATACTTTCTTTTT	80031290	True	NA	5	True	AATAAA	-22	NA	80034433	80050651	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_80034654_80036667_80036711_80037329_80037507_80038504_80038618_80042134_80042220_80044211_80044286_80045773
transcript_9648.known	chr1	+	2356	10	FSM	ENSG00000243725.7	ENST00000371281.4	2356	10	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_8	26.7913750632135	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGACTAATTTGAGGCTGG	54713607	True	NA	25	True	AGTAAA	-26	NA	54715860	54742657	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_54716020_54716599_54716718_54717491_54717654_54721162_54721241_54722674_54722800_54728345_54728433_54731485_54731701_54733628_54733711_54737581_54737665_54741410
transcript_96482.known	chr18	+	1219	6	FSM	ENSG00000101546.13	ENST00000262197.7	1219	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	73.6016304167238	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAAAATAGTGTCTCTGA	80031322	True	NA	23	True	ATTAAA	-36	NA	80034465	80046397	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_80034654_80036667_80036711_80037329_80037507_80038504_80038618_80044211_80044286_80045773
transcript_96494.known	chr18	+	2218	3	FSM	ENSG00000267127.7	ENST00000569722.5	2218	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACTGTTTGGCCAATGCT	NA	False	NA	NA	False	AATAAA	-16	NA	80034345	80097088	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_80034654_80069797_80069907_80095287
transcript_96496.known	chr18	+	880	4	FSM	ENSG00000101544.9	ENST00000560752.5	880	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	57.3120115391762	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAACATATTAAGAGGAC	80105361	True	NA	NA	False	NA	NA	NA	80109292	80136166	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_80109473_80117529_80117585_80133102_80133193_80135611
transcript_96498.known	chr18	+	5157	4	FSM	ENSG00000101544.9	ENST00000262198.9	5157	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	7.58653778449403	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAACTGTTTAATTCTTTT	80105330	True	NA	76	True	ATTAAA	-21	NA	80109261	80140346	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_+_80109473_80117529_80117651_80133102_80133193_80135611
transcript_9650.nnic	chr1	+	2003	9	NIC	ENSG00000243725.7	novel	2356	10	NA	NA	-79	0	intron_retention	FALSE	canonical	3	27	junction_7	86.3487659147483	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTAGCTGTGTGACTTC	54713528	True	NA	12	True	NA	NA	NA	54715781	54742307	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_54716020_54716599_54716718_54717491_54717654_54721162_54721241_54722674_54722800_54728345_54728433_54731485_54731701_54737581_54737665_54741410
transcript_96503.nnic	chr18	-	3167	4	NNC	ENSG00000178184.16	novel	3836	3	NA	NA	-65	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.9310159350869	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGAATATTTCACCTGT	-80246394	True	NA	19	True	AATAAA	-29	NA	80247579	80157231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr18_-_80158586_80159319_80160607_80202709_80202933_80247276
transcript_96505.nnic	chr18	-	3514	4	NNC	ENSG00000178184.16	novel	3836	3	NA	NA	-65	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.9310159350869	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGAATATTTCACCTGT	-80246394	True	NA	19	True	AATAAA	-29	NA	80247579	80157231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr18_-_80158744_80159130_80160607_80202709_80202933_80247276
transcript_96509.known	chr18	-	3836	3	FSM	ENSG00000178184.16	ENST00000353265.8	3836	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	16.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGAATATTTCACCTGT	-80246329	True	NA	19	True	AATAAA	-29	NA	80247514	80157231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_80160607_80202709_80202933_80247276
transcript_9651.known	chr1	+	549	3	FSM	ENSG00000243725.7	ENST00000486621.1	549	3	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_1	11	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATAGTTTACTCTGATTG	54713611	True	NA	NA	False	GGGGCT	-23	NA	54715864	54717767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_54716020_54716599_54716718_54717491
transcript_96510.known	chr18	-	596	3	FSM	ENSG00000178184.16	ENST00000470488.2	596	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	27	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTCTGGGAACATTTGT	-80246163	False	NA	NA	False	AATAAA	-21	NA	80247348	80182849	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr18_-_80183151_80202709_80202933_80247276
transcript_96517.known	chr19	-	1397	6	FSM	ENSG00000141934.10	ENST00000327790.7	1397	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	307.878547482607	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCAGTGCTTCTGTTCCTT	-291173	False	3901	-20	True	AGTAAA	-25	NA	291185	281039	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_281538_282133_282311_282751_282810_287473_287752_288019_288172_290951
transcript_96518.known	chr19	-	850	6	FSM	ENSG00000141934.10	ENST00000633125.1	850	6	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_5	317.850908446083	1100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCTGTCACTGACGTT	-287497	True	NA	NA	False	NA	NA	NA	291398	281462	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_281538_282133_282311_282751_282810_287473_287752_288019_288172_291288
transcript_96519.known	chr19	-	1228	6	FSM	ENSG00000141934.10	ENST00000269812.7	1228	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	309.872877160942	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTCAGTGCTTCTGTTC	-287492	True	NA	-23	True	AGTAAA	-22	NA	291393	281042	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_281538_282133_282311_282751_282810_287473_287752_288019_288172_291325
transcript_9652.known	chr1	-	2356	2	FSM	ENSG00000162396.6	ENST00000371279.4	2356	2	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	0	234	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCTTGCACATTAATTT	-54762682	True	NA	-5	True	AATAAA	-16	NA	54764523	54756897	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_54759191_54764460
transcript_9653.known	chr1	-	3401	7	FSM	ENSG00000006555.11	ENST00000371276.9	3401	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.5723301886761	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTCAGTGTTTATATGTT	-54801309	False	NA	NA	False	AATAAA	-16	NA	54801323	54779711	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_54781780_54782324_54782478_54785982_54786145_54786956_54787076_54787710_54787827_54788041_54788098_54800596
transcript_96537.nic	chr19	-	2914	15	NIC	ENSG00000105556.12	novel	2769	14	NA	NA	-9	0	intron_retention	FALSE	canonical	3	16	junction_12	89.4354173554919	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCCTTGTGGTGGATCGG	-341640	True	NA	-3	True	ATTAAA	-18	NA	344824	305572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_306712_307118_307537_308576_308666_308800_308926_311844_311940_312190_312273_313491_313644_325634_325705_326506_326599_327132_327257_327863_327990_330263_330381_334399_334543_336082_336174_344773
transcript_96547.known	chr19	-	2769	14	FSM	ENSG00000105556.12	ENST00000264819.7	2769	14	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_13	40.056469016367	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCCTTGTGGTGGATCGG	-341612	True	NA	-3	True	ATTAAA	-18	NA	344796	305572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_306712_307118_307537_308576_308666_308800_308926_311844_311940_312190_312273_313491_313644_325634_325705_326506_326599_327132_327257_327863_327990_334399_334543_336082_336174_344773
transcript_9655.known	chr1	-	2027	10	FSM	ENSG00000116133.13	ENST00000436604.2	2027	10	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_1	695.931900315357	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGCGAGCTGTGCAACGT	-54836639	True	NA	NA	False	NA	NA	NA	54887195	54850875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_54851246_54852202_54852387_54853433_54853613_54854036_54854235_54865302_54865447_54871349_54871614_54875092_54875212_54875941_54876048_54883617_54883774_54886888
transcript_96550.nic	chr19	-	2776	14	NIC	ENSG00000105556.12	novel	2769	14	NA	NA	-9	0	intron_retention	FALSE	canonical	3	18	junction_3	73.0127653587059	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCCTTGTGGTGGATCGG	-341640	True	NA	-3	True	ATTAAA	-18	NA	344824	305572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_306712_307118_307537_308576_308666_308821_308926_311844_311940_312190_312273_313491_313644_325634_325705_326506_326599_327132_327257_327863_327990_334399_334543_336082_336174_344773
transcript_96555.nic	chr19	-	2692	13	NIC	ENSG00000105556.12	novel	2769	14	NA	NA	-3	0	intron_retention	FALSE	canonical	3	38	junction_12	63.544385187748	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCCTTGTGGTGGATCGG	-341626	True	NA	-3	True	ATTAAA	-18	NA	344810	305572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_306712_307118_307537_308576_308666_308800_308926_311844_311940_312190_312273_313491_313644_325634_325705_326506_326599_327132_327257_327863_327990_334399_334543_344773
transcript_96572.known	chr19	-	3099	2	FSM	ENSG00000183186.8	ENST00000332235.8	3099	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGGGGTGGAGGTTGGCT	-408358	True	NA	-11	True	AATAAA	-14	NA	409147	405444	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_408402_409005
transcript_96575.known	chr19	+	1541	5	FSM	ENSG00000099866.16	ENST00000215637.8	1541	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3.26917420765551	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACGTGTCAGTTTTCTCA	496431	True	NA	13	True	AATAAA	-16	NA	496485	505343	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_496552_497832_498118_498495_498826_501668_501930_504744
transcript_96576.known	chr19	+	1114	2	FSM	ENSG00000141933.9	ENST00000359315.6	1114	2	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_1	0	232	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGGTGTGTATGCGAGCG	505588	True	NA	5	True	AATAAA	-18	NA	507496	519654	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_507845_518888
transcript_9658.known	chr1	-	4225	10	FSM	ENSG00000116133.13	ENST00000535035.6	4225	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	931.459878992563	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTGGAAGCTGGCGTTT	-54836611	True	NA	18	True	AATAAA	-3	NA	54887167	54849642	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_54852387_54853433_54853613_54854036_54854235_54855988_54856025_54865302_54865447_54871349_54871614_54875092_54875212_54875941_54876048_54883617_54883774_54886888
transcript_96580.known	chr19	+	1147	5	FSM	ENSG00000099804.9	ENST00000586283.6	1147	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	764.054644642646	1002	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGCTGTGCTTGGGAGG	520916	False	NA	20	True	AATAAA	-20	NA	532031	542092	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_532109_535836_535924_536242_536341_537012_537148_541342
transcript_96586.known	chr19	+	1795	8	FSM	ENSG00000172270.22	ENST00000545507.6	1795	8	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	2649.90713737948	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTCCTGGCTCCTGTCT	NA	False	NA	25	True	AATAAA	-24	NA	571276	583493	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_571580_579499_579657_580378_580462_580645_580783_581314_581592_582305_582331_582513_582583_582749
transcript_96588.known	chr19	+	1519	8	FSM	ENSG00000172270.22	ENST00000618112.4	1519	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	2697.91779121664	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAAAGATCGCCCCCACC	449024	True	NA	-5	True	NA	NA	NA	572634	583463	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_572702_579499_579657_580378_580462_580655_580783_581314_581592_582305_582331_582513_582583_582749
transcript_96598.known	chr19	-	509	3	FSM	ENSG00000267751.6	ENST00000590292.6	1042	3	40	493	-6	-101	multi-exon	FALSE	canonical	3	32	junction_2	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCTGCTCTCGCTAGA	-571294	True	NA	-3	True	NA	NA	NA	571734	567310	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_567625_571439_571597_571696
transcript_9660.known	chr1	-	3575	10	FSM	ENSG00000116133.13	ENST00000648728.1	3575	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	921.005583018158	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTTGCTCAGTGCAAAAC	-54836639	True	NA	NA	False	NA	NA	NA	54887195	54850341	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_54852387_54853433_54853613_54854036_54854235_54865302_54865447_54871349_54871614_54875092_54875212_54875941_54876048_54879748_54879806_54883617_54883774_54886888
transcript_96601.known	chr19	-	721	2	FSM	ENSG00000267751.6	ENST00000589457.3	733	2	12	0	8	0	multi-exon	FALSE	canonical	3	39	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAATTAATTGCGAGAATG	-571305	True	NA	5	True	NA	NA	NA	571745	567209	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_567625_571439
transcript_96603.known	chr19	+	1630	8	FSM	ENSG00000172270.22	ENST00000680065.1	1630	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	2708.20634971803	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATAAAGATCGCCCCCAC	448918	True	NA	-6	True	NA	NA	NA	572528	583462	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_572702_579499_579657_580378_580462_580645_580783_581314_581592_582305_582331_582513_582579_582749
transcript_96604.known	chr19	+	1329	6	FSM	ENSG00000172270.22	ENST00000618006.4	1329	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3053.04853548056	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCACCCTCTCCTGGCTC	449008	True	NA	19	True	AATAAA	-18	NA	572618	583487	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_572702_580645_580783_581314_581592_582305_582331_582513_582583_582749
transcript_96605.known	chr19	+	1946	9	FSM	ENSG00000172270.22	ENST00000333511.9	1946	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	3277.54205731978	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTCCTGGCTCCTGTCT	448985	True	NA	25	True	AATAAA	-24	NA	572595	583493	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_572702_577773_578122_579499_579657_580378_580462_580645_580783_581314_581592_582305_582331_582513_582583_582749
transcript_96623.nic	chr19	-	4009	21	NIC	ENSG00000099821.14	novel	3771	21	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	196.187225628989	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCCACTGTCTTCAGGAA	-621979	True	NA	-38	True	AATAAA	-19	NA	633551	617223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_617324_617418_617481_617569_617656_617776_617850_618487_618587_618704_618761_618996_619111_619209_619297_619585_619766_619957_620081_620364_620488_621057_621847_622148_622374_622581_622753_622820_622986_623453_623604_624718_624906_625123_625255_629539_630169_632833_632939_633197
transcript_96624.known	chr19	-	3771	21	FSM	ENSG00000099821.14	ENST00000588649.7	3771	21	0	0	0	0	multi-exon	TRUE	canonical	3	641	junction_6	84.7132073528089	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGTCTTCAGGAAGGG	-621965	True	NA	-35	True	AATAAA	-22	NA	633537	617220	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_617324_617418_617481_617569_617656_617776_617850_618487_618587_618704_618761_618996_619111_619209_619297_619585_619766_619957_620081_620364_620488_621057_621847_622148_622374_622581_622753_622820_622986_623453_623604_624718_624906_625123_625255_629539_630169_632833_632939_633424
transcript_96631.nnic	chr19	-	3891	21	NNC	ENSG00000099821.14	novel	3771	21	NA	NA	-102	0	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_4	177.068517811609	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCCACTGTCTTCAGGAA	NA	False	NA	-38	True	AATAAA	-19	NA	633639	617223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_617324_617418_617481_617569_617656_617776_617871_618487_618587_618704_618761_618996_619111_619209_619297_619585_619766_619957_620081_620364_620488_621057_621847_622148_622374_622581_622753_622820_622986_623453_623604_624718_624906_625123_625255_629539_630169_632833_632939_633424
transcript_96675.known	chr19	-	469	4	FSM	ENSG00000099821.14	ENST00000592633.5	469	4	0	0	0	0	multi-exon	FALSE	canonical	3	902	junction_1	18.5711843695788	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCCACTGTCTTCAGGAA	-617967	False	NA	-38	True	AATAAA	-19	NA	617997	617223	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_617324_617418_617481_617569_617656_617776
transcript_96676.known	chr19	+	1311	3	FSM	ENSG00000070388.12	ENST00000215530.7	1329	3	16	2	0	0	multi-exon	FALSE	canonical	2	2	junction_2	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTGGTCTTTTGTTA	639799	True	NA	4	True	AATAAA	-15	NA	639894	644371	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_640140_643234_643339_643409
transcript_96677.known	chr19	+	1288	3	FSM	ENSG00000070388.12	ENST00000586042.6	1288	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTGGTCTTTTGTTA	639799	True	NA	4	True	AATAAA	-15	NA	639894	644371	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_640140_643234_643339_643432
transcript_96678.known	chr19	+	1712	1	FSM	ENSG00000070388.12	ENST00000591390.1	1712	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAACAGTGAATGACGTG	639783	True	NA	NA	False	NA	NA	NA	639878	641590	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_639900_641600
transcript_9668.known	chr1	-	4233	9	FSM	ENSG00000116133.13	ENST00000371269.9	4233	9	0	0	0	0	multi-exon	FALSE	canonical	3	2014	junction_3	139.13010996905	3393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCGTTTCTTGCTTGG	-54836639	True	NA	-7	True	AATAAA	-19	NA	54887195	54849626	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_54852387_54853433_54853613_54854036_54854235_54865302_54865447_54871349_54871614_54875092_54875212_54875941_54876048_54883617_54883774_54886888
transcript_96682.known	chr19	-	1631	9	FSM	ENSG00000070423.18	ENST00000292363.10	1631	9	0	0	0	0	multi-exon	FALSE	canonical	3	778	junction_5	60.578461518926	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGGTGCTGTGGCTTTCCT	-658042	True	NA	-5	True	AATACA	-17	NA	663214	647525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_648278_648371_648488_648881_648976_649678_649749_650233_650297_651610_651856_652232_652297_652825_652885_663046
transcript_96683.known	chr19	-	1671	9	FSM	ENSG00000070423.18	ENST00000605891.5	1671	9	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_6	293.136486981747	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGGTGCTGTGGCTTTCCT	-658022	True	NA	-5	True	AATACA	-17	NA	663194	647525	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_648278_648371_648488_648881_648976_649678_649749_650233_650297_651610_651916_652232_652297_652825_652885_663046
transcript_96684.known	chr19	-	963	9	FSM	ENSG00000070423.18	ENST00000589762.5	963	9	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_5	245.18229824969	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCCCACGTCGGCCGTC	-658061	True	NA	NA	False	NA	NA	NA	663233	648131	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_648278_648371_648488_648881_648976_649678_649749_650233_650297_651691_651856_652232_652297_652825_652885_663046
transcript_96721.known	chr19	-	733	4	FSM	ENSG00000070423.18	ENST00000591394.2	733	4	0	0	0	0	multi-exon	FALSE	canonical	3	829	junction_1	42.6692707538653	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCTGCCAGGCCCACGTG	-658013	True	NA	NA	False	NA	NA	NA	663185	651384	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_651856_652232_652297_652825_652885_663046
transcript_96723.known	chr19	-	652	2	FSM	ENSG00000070423.18	ENST00000592626.3	652	2	0	0	0	0	multi-exon	FALSE	canonical	3	890	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCGCCTGGCGCATGGGGG	-657999	True	NA	NA	False	NA	NA	NA	663171	652357	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_652885_663046
transcript_96724.known	chr19	+	2144	3	FSM	ENSG00000070404.10	ENST00000592947.5	2144	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	9	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTGTCCAGGCCTCAGT	680634	False	NA	8	True	AATAAA	-15	NA	680706	683392	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_680880_681332_681561_681649
transcript_96726.known	chr19	+	2755	8	FSM	ENSG00000099864.18	ENST00000264560.11	2755	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	3.54562104171167	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGGAGTTCTTGCCTT	708802	False	NA	21	True	AATAAA	-18	NA	708938	748329	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_709152_726137_726190_727007_727089_727563_727695_731094_731246_734172_734195_736018_736079_746284
transcript_96727.known	chr19	+	1346	6	FSM	ENSG00000099864.18	ENST00000592870.5	1346	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	1.49666295470958	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGAGGAATGAACTGTGA	708960	False	NA	59	True	NA	NA	NA	709096	735048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_709152_726137_726190_727007_727089_727563_727695_731094_731246_734172
transcript_96728.known	chr19	+	603	1	FSM	ENSG00000267530.4	ENST00000666859.1	603	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGCTGCCCAGAAATCCA	782475	True	NA	NA	False	NA	NA	NA	782776	783379	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_782800_783400
transcript_96735.known	chr19	+	3206	15	FSM	ENSG00000011304.22	ENST00000356948.11	3206	15	0	0	0	0	multi-exon	FALSE	canonical	3	1164	junction_8	219.360259548961	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCGTTCCGCCTTCGTTG	751800	True	NA	27	True	AATAAA	-15	NA	797451	812312	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_797506_799412_799444_803560_803637_804035_804209_804291_804439_804531_804703_804828_804940_805012_805188_805491_805570_806407_806557_807868_807903_808359_808453_808545_808763_810542_810621_810693
transcript_96737.known	chr19	+	3185	15	FSM	ENSG00000011304.22	ENST00000394601.8	3185	15	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_8	460.163790715561	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCGTTCCGCCTTCGTTG	751800	True	NA	27	True	AATAAA	-15	NA	797451	812312	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_797506_799412_799444_803560_803637_804035_804209_804291_804439_804531_804703_804828_804940_805012_805188_805512_805570_806407_806557_807868_807903_808359_808453_808545_808763_810542_810621_810693
transcript_96741.known	chr19	+	3233	15	FSM	ENSG00000011304.22	ENST00000679114.1	3233	15	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	464.53516375765	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTACCTGGACTTCGAAT	798414	False	NA	-10	True	NA	NA	NA	798427	812275	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_798546_799412_799444_803560_803637_804035_804209_804291_804439_804531_804703_804828_804940_805012_805188_805491_805570_806407_806557_807868_807903_808359_808453_808545_808763_810542_810621_810693
transcript_96754.known	chr19	+	3155	14	FSM	ENSG00000011304.22	ENST00000349038.8	3155	14	0	0	0	0	multi-exon	FALSE	canonical	3	576	junction_8	325.231788077874	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCGTTCCGCCTTCGTTG	751773	True	NA	27	True	AATAAA	-15	NA	797424	812312	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_797506_799412_799444_803560_803637_804035_804209_804291_804439_804531_804703_804828_804940_805012_805188_806407_806557_807868_807903_808359_808453_808545_808763_810542_810621_810693
transcript_96759.known	chr19	+	3691	14	FSM	ENSG00000011304.22	ENST00000635647.1	3691	14	0	0	0	0	multi-exon	TRUE	canonical	3	1164	junction_7	227.640690614988	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGCTGGCTTCCTCTTTC	NA	False	NA	42	True	AATAAA	-30	NA	797074	812327	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_797506_799412_799444_803560_803637_804035_804209_804291_804703_804828_804940_805012_805188_805491_805570_806407_806557_807868_807903_808359_808453_808545_808763_810542_810621_810693
transcript_96804.known	chr19	+	749	8	FSM	ENSG00000011304.22	ENST00000589575.5	749	8	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_5	604.925024870261	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACGGGCAGAACATCTACA	751810	True	NA	NA	False	NA	NA	NA	797461	805017	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_797506_799412_799444_803560_803637_804035_804209_804291_804439_804540_804703_804828_804940_805012
transcript_96811.known	chr19	+	3069	14	FSM	ENSG00000011304.22	ENST00000350092.8	3069	14	0	0	0	0	multi-exon	FALSE	canonical	3	1164	junction_7	225.30851957723	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTGTCTAGCCCTGTGT	799389	False	NA	27	True	ATTAAA	-18	NA	799405	812222	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_799444_803560_803637_804035_804209_804291_804439_804531_804703_804828_804940_805012_805188_805491_805570_806407_806557_807868_807903_808359_808453_808545_808763_810542_810621_810693
transcript_96816.known	chr19	-	2306	8	FSM	ENSG00000129951.19	ENST00000520876.8	2306	8	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_7	55.681308921983	397	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCGGCTCTTGGTCATTC	-817850	True	NA	-30	True	AATAAA	-15	NA	821955	812487	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_813896_814433_814608_814691_814750_814885_815082_815185_815328_815665_815852_821484_821586_821914
transcript_96824.known	chr19	+	1036	4	FSM	ENSG00000196415.10	ENST00000544537.2	1036	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.44948974278318	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCTCCTGTCTGTCCT	NA	False	NA	4	True	AATAAA	-13	NA	843340	848175	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_843627_843892_844035_846146_846378_847798
transcript_96826.known	chr19	+	1191	5	FSM	ENSG00000197766.8	ENST00000327726.11	1191	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.5841423566947	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGTAATCCCAGCACTT	NA	False	NA	NA	False	NA	NA	NA	859663	863641	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_859745_860616_860774_860860_861006_861698_861957_863091
transcript_96828.known	chr19	-	3420	15	FSM	ENSG00000175221.16	ENST00000395808.7	3420	15	0	0	0	0	multi-exon	TRUE	canonical	3	287	junction_5	65.1152823843988	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCTGTTTCTGTGTCTCT	-885233	True	NA	NA	False	NA	NA	NA	893218	867629	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_868500_868862_868947_871036_871254_871925_872119_873448_873583_875243_875455_876973_877181_879936_880149_881558_881715_884902_885009_885769_886202_889637_889808_890136_890245_890962_891150_893085
transcript_9683.known	chr1	+	1256	3	FSM	ENSG00000143001.5	ENST00000371268.4	1256	3	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	4	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCACGACTCTATGAGTTG	54980578	True	NA	1	True	AATAAA	-16	NA	54980627	54992288	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_54981081_54986096_54986447_54991835
transcript_96832.nnic	chr19	+	2583	4	NNC	ENSG00000197766.8	novel	809	5	NA	NA	985	5842	intron_retention	FALSE	canonical	1	1	junction_3	8.80656320908194	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCAGTTTACAAGCCTCT	NA	False	NA	-1	True	ATTAAA	-12	NA	860648	869483	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_860774_860860_861006_861698_861957_867428
transcript_96834.known	chr19	-	2892	16	FSM	ENSG00000175221.16	ENST00000325464.6	2892	16	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	123.058504604743	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCCGCGTCCCTGCCGTCG	-885202	True	NA	-15	True	AATAAA	-16	NA	893187	867962	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_868252_868415_868500_868862_868947_871036_871254_871925_872119_873448_873583_875243_875455_876973_877181_879936_880149_881558_881715_884902_885009_885769_886202_889637_889808_890136_890245_890962_891150_893085
transcript_96837.nic	chr19	-	2116	10	NIC	ENSG00000198858.10	novel	1803	8	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	297.110903349051	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGGCTATGTGTGTTTTT	-906703	True	NA	-7	True	AATAAA	-17	NA	913230	896502	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_897541_899439_899496_899600_899687_900060_900147_900828_900953_901421_901547_901975_902131_902241_902435_902518_902628_913086
transcript_96841.nic	chr19	-	2227	9	NIC	ENSG00000198858.10	novel	1803	8	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	277.414851801413	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGGCTATGTGTGTTTTT	-906703	True	NA	-7	True	AATAAA	-17	NA	913230	896502	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_897541_899439_899496_899600_899687_900060_900147_900828_900953_901421_901547_901975_902435_902518_902628_913086
transcript_96846.known	chr19	-	1765	8	FSM	ENSG00000198858.10	ENST00000587975.2	1765	8	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_7	228.536783088609	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGGGCTATGTGTGTTTT	-913212	False	NA	-8	True	AATAAA	-16	NA	913245	896503	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_897541_899439_899496_899600_899687_900060_900147_900828_900953_901421_901547_901975_902068_913086
transcript_96847.known	chr19	-	1803	8	FSM	ENSG00000198858.10	ENST00000361574.10	1803	8	0	0	0	0	multi-exon	TRUE	canonical	3	517	junction_7	51.5664817572067	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGGCTATGTGTGTTTTT	-906692	True	NA	-7	True	AATAAA	-17	NA	913219	896502	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_897541_899439_899496_899600_899687_900060_900147_900828_900953_901421_901547_901975_902131_913086
transcript_96854.known	chr19	-	1704	7	FSM	ENSG00000198858.10	ENST00000589428.5	1704	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	231.759034343863	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGGCTATGTGTGTTTTT	-913212	False	NA	-7	True	AATAAA	-17	NA	913245	896502	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_897541_899439_899496_899600_899687_900060_900147_900828_900953_901975_902131_913086
transcript_96862.known	chr19	+	1624	5	FSM	ENSG00000116014.10	ENST00000234371.10	1624	5	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_1	1.6393596310755	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTGTAGTTGACTGTC	917286	True	NA	57	True	NA	NA	NA	917332	921005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_917747_918543_918669_919489_919626_919873_920107_920289
transcript_96873.nnic	chr19	+	2657	9	NNC	ENSG00000116017.11	novel	1016	6	NA	NA	-1073	166	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	63.2020569285526	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATATATATATATATATATA	924661	False	NA	NA	False	AAAAAG	-12	NA	924707	972221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_925160_929261_929897_932417_932743_960091_960165_964247_964432_964832_965081_966571_966869_968404_968504_971877
transcript_96875.nic	chr19	+	2452	9	NIC	ENSG00000116017.11	novel	1016	6	NA	NA	-107	166	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	53.9651218380909	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATATATATATATATATATA	925656	False	NA	NA	False	AAAAAG	-12	NA	925673	972221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_925921_929261_929897_932417_932743_960091_960165_964247_964432_964832_965081_966571_966869_968404_968504_971877
transcript_96877.known	chr19	+	5948	9	FSM	ENSG00000116017.11	ENST00000263620.8	5948	9	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	55.9998604908977	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCCTGTGGTGTTTTTTT	925021	True	NA	28	True	ATTAAA	-35	NA	926034	975939	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_926060_929261_929897_932417_932743_960091_960165_964247_964432_964832_965081_966571_966869_968404_968504_971877
transcript_96879.nnic	chr19	+	2418	9	NNC	ENSG00000116017.11	novel	5948	9	NA	NA	-50	166	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	53.9651218380909	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATATATATATATATATATA	924498	False	NA	NA	False	AAAAAG	-12	NA	925984	972221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_926198_929261_929897_932417_932743_960091_960165_964247_964432_964832_965081_966571_966869_968404_968504_971877
transcript_96889.known	chr19	+	1397	9	FSM	ENSG00000065268.11	ENST00000607440.5	1397	9	0	0	0	0	multi-exon	FALSE	canonical	1	24	junction_1	481.867136771123	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTCTCCGGCCTCCTTG	975005	True	NA	19	True	NA	NA	NA	984357	994557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_984564_989761_989896_990222_990365_990851_990996_991080_991146_991226_991352_991954_992122_994019_994089_994212
transcript_96891.known	chr19	+	1465	9	FSM	ENSG00000065268.11	ENST00000587001.6	1465	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_8	465.81541408588	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTCTCCGGCCTCCTTG	974979	True	NA	19	True	NA	NA	NA	984331	994557	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_984564_985864_985976_989761_989896_990222_990365_990851_990996_991080_991146_991226_991352_991954_992122_994212
transcript_96901.known	chr19	-	2753	11	FSM	ENSG00000182087.14	ENST00000593068.7	2753	11	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	468.368188501311	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGCTGTGTGTGTGTCTT	-1006178	True	NA	-26	True	AATAAA	-22	NA	1021179	1009647	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1010896_1010990_1011096_1011366_1011500_1011579_1011664_1011740_1011799_1011891_1011993_1012065_1012189_1012462_1012574_1013240_1013341_1014191_1014474_1020771
transcript_9691.known	chr1	+	3637	12	FSM	ENSG00000169174.11	ENST00000302118.5	3637	12	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_6	21.632543589434	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCATAGACTTGACTG	55035316	True	NA	19	True	AATAAA	-22	NA	55039547	55064852	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_55040045_55043842_55044035_55046522_55046647_55052277_55052412_55052649_55052792_55055992_55056190_55057330_55057515_55058035_55058210_55058498_55058648_55059485_55059664_55061374_55061557_55063368
transcript_96912.nic	chr19	-	2804	11	NIC	ENSG00000182087.14	novel	2687	11	NA	NA	-112	0	intron_retention	FALSE	canonical	3	266	junction_4	311.658932167843	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGCGCTGTGTGTGT	-1021281	False	NA	-31	True	AATAAA	-17	NA	1021291	1009652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_1010896_1011095_1011196_1011366_1011500_1011579_1011613_1011740_1011799_1011891_1011993_1012065_1012189_1012462_1012574_1013240_1013341_1014191_1014474_1020771
transcript_96917.known	chr19	-	2687	11	FSM	ENSG00000182087.14	ENST00000356663.8	2687	11	0	0	0	0	multi-exon	FALSE	canonical	3	964	junction_4	152.58731926343	1787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGCGCTGTGTGTGT	-1006122	True	NA	-31	True	AATAAA	-17	NA	1021123	1009652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1010896_1011095_1011196_1011366_1011500_1011579_1011664_1011740_1011799_1011891_1011993_1012065_1012189_1012462_1012574_1013240_1013341_1014191_1014474_1020771
transcript_96922.known	chr19	-	2581	10	FSM	ENSG00000182087.14	ENST00000333175.9	2581	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	397.802854578887	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGCGCTGTGTGTGTGT	-1006114	True	NA	-29	True	AATAAA	-19	NA	1021115	1009650	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1010896_1011366_1011500_1011579_1011664_1011740_1011799_1011891_1011993_1012065_1012189_1012462_1012574_1013240_1013341_1014191_1014474_1020771
transcript_96940.nic	chr19	-	3078	10	NIC	ENSG00000182087.14	novel	2687	11	NA	NA	-112	0	intron_retention	FALSE	canonical	3	266	junction_4	325.069717118735	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGCGCTGTGTGTGT	-1021281	False	NA	-31	True	AATAAA	-17	NA	1021291	1009652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_1010896_1011095_1011196_1011366_1011500_1011579_1011613_1011740_1011799_1011891_1011993_1012065_1012574_1013240_1013341_1014191_1014474_1020771
transcript_96945.nic	chr19	-	3129	10	NIC	ENSG00000182087.14	novel	2687	11	NA	NA	-112	0	intron_retention	FALSE	canonical	3	964	junction_4	143.82860169892	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGCGCTGTGTGTGT	-1021281	False	NA	-31	True	AATAAA	-17	NA	1021291	1009652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_1010896_1011095_1011196_1011366_1011500_1011579_1011664_1011740_1011799_1011891_1011993_1012065_1012574_1013240_1013341_1014191_1014474_1020771
transcript_96958.nic	chr19	-	3026	10	NIC	ENSG00000182087.14	novel	2687	11	NA	NA	-112	0	intron_retention	FALSE	canonical	3	964	junction_3	145.201605269499	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGCGCTGTGTGTGT	-1021281	False	NA	-31	True	AATAAA	-17	NA	1021291	1009652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_1010896_1011095_1011500_1011579_1011664_1011740_1011799_1011891_1011993_1012065_1012189_1012462_1012574_1013240_1013341_1014191_1014474_1020771
transcript_9698.nnic	chr1	+	3429	10	NIC	ENSG00000169174.11	novel	3637	12	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	88.7891106658891	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTTGCATAGACTTGAC	55035206	True	NA	17	True	AATAAA	-20	NA	55039437	55064850	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_55040045_55052277_55052412_55052649_55052792_55055992_55056190_55057330_55057515_55058035_55058210_55058498_55058648_55059485_55059664_55061374_55061557_55063368
transcript_96993.nic	chr19	-	3300	9	NIC	ENSG00000182087.14	novel	2687	11	NA	NA	-112	0	intron_retention	FALSE	canonical	3	964	junction_3	128.401165785206	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGCGCTGTGTGTGT	-1021281	False	NA	-31	True	AATAAA	-17	NA	1021291	1009652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_1010896_1011095_1011500_1011579_1011664_1011740_1011799_1011891_1011993_1012065_1012574_1013240_1013341_1014191_1014474_1020771
transcript_970.known	chr1	+	4098	16	FSM	ENSG00000160072.20	ENST00000673477.1	4098	16	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_13	118.713361599368	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAACTGTTTAAAAAAAAAAA	1464808	True	NA	NA	False	NA	NA	NA	1471764	1497848	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_1472090_1477273_1477351_1478643_1478746_1479048_1479109_1480866_1480937_1482137_1482304_1482544_1482615_1485015_1485172_1485781_1485839_1486109_1486236_1486543_1486669_1487862_1487915_1489203_1489275_1490256_1490425_1490562_1490672_1495484
transcript_97015.nic	chr19	-	3377	8	NIC	ENSG00000182087.14	novel	2687	11	NA	NA	-112	0	intron_retention	FALSE	canonical	3	1186	junction_2	85.8254041645013	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGCGCTGTGTGTGT	-1021281	False	NA	-31	True	AATAAA	-17	NA	1021291	1009652	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_1010896_1011095_1011500_1011579_1011799_1011891_1011993_1012065_1012574_1013240_1013341_1014191_1014474_1020771
transcript_9702.known	chr1	-	10800	68	FSM	ENSG00000162402.14	ENST00000294383.7	10800	68	0	0	0	0	multi-exon	TRUE	canonical	3	71	junction_67	35.8372475114966	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGAGTCTTGCCGCCATT	-55209344	True	NA	-1	True	AATAAA	-16	NA	55215364	55066358	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_55069108_55071813_55071925_55072316_55072404_55072785_55072862_55073827_55073907_55075456_55075524_55077234_55077301_55078537_55078652_55079537_55079660_55081321_55081425_55083271_55083365_55083771_55083889_55085941_55086039_55089626_55089741_55092022_55092127_55092820_55092917_55093936_55094088_55095254_55095397_55096497_55096623_55096951_55097173_55097597_55097718_55097942_55098085_55098475_55098559_55099770_55099870_55100838_55100965_55101583_55101704_55103875_55104021_55106145_55106264_55107238_55107431_55110184_55110247_55120595_55120757_55121435_55121507_55123446_55123603_55124468_55124629_55125319_55125549_55125662_55125759_55129476_55129575_55132544_55132701_55134069_55134164_55134327_55134414_55137514_55137689_55137805_55137905_55138607_55138719_55138943_55139011_55141615_55141732_55142741_55142796_55142978_55143120_55144126_55144204_55145997_55146110_55146928_55147061_55147648_55147799_55148462_55148571_55153869_55153918_55154118_55154281_55154370_55154467_55154670_55154779_55156947_55157052_55157255_55157371_55158877_55159037_55159610_55159686_55162198_55162265_55165884_55165951_55166567_55166604_55171555_55171679_55172376_55172521_55176375_55176444_55177966_55178133_55214789
transcript_97051.known	chr19	+	1492	8	FSM	ENSG00000064666.15	ENST00000568865.3	1492	8	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_6	1192.54599877056	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTTTTTCCCCCAGGGG	976413	True	NA	NA	False	AAGAAA	-3	NA	1026630	1038309	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1026725_1031070_1031193_1032391_1032459_1032558_1032697_1036129_1036247_1036415_1036563_1036878_1037001_1037624
transcript_9706.known	chr1	-	3273	6	FSM	ENSG00000162407.9	ENST00000371250.4	3273	6	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_5	12.3060960503321	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGACTTGCAAGCCTGG	-56579543	False	NA	-12	True	AATAAA	-19	NA	56579563	56494760	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_56496677_56511975_56512153_56523822_56523881_56524276_56524555_56536954_56537113_56578877
transcript_97062.known	chr19	+	2109	7	FSM	ENSG00000064666.15	ENST00000565096.6	2109	7	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_4	909.023545105161	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGCCAAGAGAGTTGGCG	976400	True	NA	31	True	AATAAA	-23	NA	1026617	1039068	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1026725_1031070_1031193_1032391_1032459_1032558_1032664_1036129_1036247_1036415_1036563_1037624
transcript_97064.known	chr19	+	2194	7	FSM	ENSG00000064666.15	ENST00000562958.6	2194	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	978.693800713765	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGCCAAGAGAGTTGGCG	976411	True	NA	31	True	AATAAA	-23	NA	1026628	1039068	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1026725_1031070_1031193_1032391_1032459_1032558_1032697_1036066_1036247_1036415_1036563_1037624
transcript_97067.known	chr19	+	2149	7	FSM	ENSG00000064666.15	ENST00000263097.9	2149	7	0	0	0	0	multi-exon	FALSE	canonical	3	2356	junction_6	139.610967413818	5326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTGGCCAAGAGAGTTG	976390	True	NA	28	True	AATAAA	-20	NA	1026607	1039065	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1026725_1031070_1031193_1032391_1032459_1032558_1032697_1036129_1036247_1036415_1036563_1037624
transcript_97074.known	chr19	+	2033	6	FSM	ENSG00000064666.15	ENST00000348419.7	2033	6	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_4	984.345752263908	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGCCAAGAGAGTTGGCG	976392	True	NA	31	True	AATAAA	-23	NA	1026609	1039068	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1026725_1031070_1031193_1032391_1032459_1032558_1032697_1036415_1036563_1037624
transcript_97078.known	chr19	+	6815	47	FSM	ENSG00000064687.13	ENST00000263094.11	6815	47	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_12	22.0315978618852	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGTGCATGTGTGTCCTT	1038589	True	NA	20	True	AATAAA	-33	NA	1040106	1065572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1040197_1041224_1041428_1041509_1041604_1041830_1041973_1042063_1042177_1042314_1042398_1042745_1042827_1043040_1043252_1043333_1043474_1043724_1043842_1044576_1044745_1045001_1045232_1046229_1046407_1046801_1047025_1047156_1047379_1047452_1047655_1048894_1049006_1049265_1049438_1050920_1051053_1051154_1051295_1051448_1051587_1051941_1052127_1052213_1052287_1053328_1053532_1053787_1053837_1054005_1054111_1054192_1054342_1054569_1054695_1054779_1054879_1055096_1055352_1055906_1055940_1056065_1056244_1056329_1056500_1056906_1057085_1057313_1057430_1057914_1058060_1058145_1058270_1058617_1058748_1058819_1058941_1059022_1059086_1061781_1061889_1062171_1062314_1063543_1063679_1063759_1063864_1064160_1064254_1064930_1065172_1065269
transcript_97091.known	chr19	+	389	3	FSM	ENSG00000064687.13	ENST00000524383.1	389	3	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	84	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGAGTGGGAGTGGACC	1064494	False	NA	NA	False	NA	NA	NA	1064658	1065328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1064748_1064930_1065172_1065269
transcript_97092.nic	chr19	+	847	2	ISM	ENSG00000064687.13	ENST00000525073.6	1918	14	7694	-3	-31	0	3prime_fragment	FALSE	canonical	3	171	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGTGCATGTGTGTCCTT	1064463	True	NA	20	True	AATAAA	-33	NA	1064627	1065572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_1065172_1065269
transcript_97093.known	chr19	+	4272	23	FSM	ENSG00000180448.11	ENST00000313093.7	4272	23	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	59.6601255321542	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTGTGGCAGCTGCA	1066796	True	NA	14	True	AATAAA	-16	NA	1067166	1086628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1067496_1068413_1068745_1073148_1073293_1073505_1073591_1073673_1073747_1073947_1074015_1074103_1074242_1074342_1074408_1074613_1074725_1074798_1074880_1077856_1078046_1079702_1079841_1079927_1080119_1080254_1080380_1080463_1080548_1080681_1080787_1080891_1081065_1081549_1081739_1081823_1081962_1082839_1083067_1083142_1083354_1084237_1084347_1085659
transcript_97098.known	chr19	+	3750	22	FSM	ENSG00000180448.11	ENST00000543365.5	3750	22	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	45.7157737853043	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTGTGGCAGCTGCA	1069274	True	NA	14	True	AATAAA	-16	NA	1071220	1086628	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1071359_1073148_1073293_1073505_1073591_1073673_1073747_1073947_1074015_1074103_1074242_1074342_1074408_1074613_1074725_1074798_1074880_1077856_1078046_1079702_1079841_1079927_1080119_1080254_1080380_1080463_1080548_1080681_1080787_1080891_1081065_1081549_1081739_1081823_1081962_1082839_1083067_1083142_1083354_1084237_1084347_1085659
transcript_9710.known	chr1	+	9355	9	FSM	ENSG00000162409.12	ENST00000371244.9	9355	9	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	6.06088896120033	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTTCTGCTCCATCA	56643249	True	NA	22	True	ATTAAA	-25	NA	56645313	56715335	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_56645482_56674380_56674523_56691393_56691488_56692357_56692503_56693764_56693853_56695934_56696160_56703970_56704476_56706091_56706219_56707474
transcript_97109.known	chr19	-	1214	8	FSM	ENSG00000099817.12	ENST00000591767.5	1214	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	1463.0322718831	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTCCAGCAGGTGGCCTT	-1056000	True	NA	NA	False	AATAAA	-34	NA	1095336	1088147	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1088721_1089471_1089552_1089883_1089963_1090086_1090146_1090907_1090989_1091791_1091908_1093755_1093904_1095258
transcript_97110.known	chr19	-	2854	8	FSM	ENSG00000099817.12	ENST00000615234.5	2854	8	0	0	0	0	multi-exon	FALSE	canonical	3	3087	junction_2	289.115611364544	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTGGCTTCCGAGAGACCC	-1056039	True	NA	-23	True	AATAAA	-22	NA	1095375	1086573	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1088721_1089471_1089552_1089883_1089963_1090086_1090146_1090907_1090989_1091791_1091908_1093903_1094079_1095258
transcript_97112.known	chr19	-	1286	8	FSM	ENSG00000099817.12	ENST00000215587.11	1286	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	1229.790043471	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCCGACTAACAAGGTTT	-1056038	True	NA	NA	False	AATAAA	-19	NA	1095374	1088162	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1088721_1089471_1089574_1089883_1089963_1090086_1090146_1090907_1090989_1091791_1091908_1093903_1094079_1095258
transcript_97116.known	chr19	-	1749	8	FSM	ENSG00000099817.12	ENST00000612655.4	1749	8	0	0	0	0	multi-exon	FALSE	canonical	2	71	junction_1	1205.96107833088	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCCAAAGGGACAAACACT	-1056044	True	NA	NA	False	NA	NA	NA	1095380	1087644	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1088682_1089471_1089552_1089883_1089963_1090086_1090146_1090907_1090989_1091791_1091908_1093903_1094079_1095258
transcript_97118.known	chr19	-	487	7	FSM	ENSG00000099817.12	ENST00000585838.2	487	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	1528.81647216255	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTCACGGCTGCTGCTC	-1095248	False	NA	NA	False	NA	NA	NA	1095261	1088644	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1088714_1089471_1089552_1089883_1089963_1090086_1090146_1090907_1090989_1091791_1091908_1095258
transcript_97132.known	chr19	+	1563	3	FSM	ENSG00000180448.11	ENST00000592297.2	1563	3	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_2	7	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCTGAAATAAAAAGTTTT	NA	False	NA	-14	True	NA	NA	NA	1082840	1086600	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1083354_1084237_1084347_1085659
transcript_97136.known	chr19	+	1002	8	NNC	ENSG00000167468.19	novel	536	6	NA	NA	-56	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	1533.60415827739	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTCTGCGTAGGGGCTT	1102522	True	NA	21	True	AATAAA	-21	NA	1104649	1106787	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_1104930_1105185_1105281_1105365_1105403_1105405_1105511_1105657_1105810_1106241_1106267_1106399_1106460_1106539
transcript_97138.known	chr19	+	803	7	FSM	ENSG00000167468.19	ENST00000588919.5	803	7	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_5	1272.86317672665	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGCGTAGGGGCTTG	1073176	True	NA	22	True	AATAAA	-22	NA	1104072	1106788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1104128_1105185_1105281_1105365_1105511_1105657_1105810_1106241_1106267_1106377_1106460_1106539
transcript_97140.known	chr19	+	793	7	FSM	ENSG00000167468.19	ENST00000611653.4	793	7	0	0	0	0	multi-exon	FALSE	canonical	3	3170	junction_1	180.753054377144	1108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGATCTTTCTGCGT	1073155	True	NA	13	True	AATAAA	-13	NA	1104051	1106779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1104128_1105185_1105281_1105365_1105511_1105657_1105810_1106241_1106267_1106399_1106460_1106539
transcript_97147.known	chr19	+	812	6	FSM	ENSG00000167468.19	ENST00000589115.6	812	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	1392.03930978978	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGATCTTTCTGCGT	1073111	True	NA	13	True	AATAAA	-13	NA	1104007	1106779	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1104128_1105185_1105281_1105365_1105511_1105657_1105810_1106399_1106460_1106539
transcript_97154.known	chr19	+	859	4	FSM	ENSG00000167468.19	ENST00000585362.6	859	4	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_1	1544.56128255099	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGAAGTGGATGAAGATCC	1073518	False	NA	NA	False	NA	NA	NA	1104414	1105761	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1104930_1105185_1105281_1105365_1105511_1105657
transcript_97155.known	chr19	-	4906	32	FSM	ENSG00000064932.16	ENST00000361757.8	4906	32	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_23	9.99479573214817	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACGGAGTCTGCTCCTCA	-1171471	True	NA	-7	True	AATATA	-19	NA	1174268	1107637	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1108705_1108778_1108970_1109134_1109212_1109291_1109424_1109505_1109599_1109682_1109778_1110744_1110889_1111018_1111094_1111505_1111615_1111995_1112068_1112188_1112302_1112401_1112538_1112817_1112950_1113534_1113705_1114230_1114423_1116020_1116104_1116828_1116927_1117322_1117500_1119010_1119165_1119515_1119622_1119905_1120024_1122138_1122283_1122467_1122559_1122657_1122792_1122893_1123046_1123533_1123640_1123941_1124023_1127603_1127766_1147308_1147421_1149368_1149443_1154183_1154403_1174171
transcript_97164.known	chr19	-	2403	14	FSM	ENSG00000064932.16	ENST00000592222.5	2403	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	16.0833627147129	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGGGGAATCGCTTGAAC	-1132178	True	NA	NA	False	NA	NA	NA	1132221	1115355	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1116104_1116828_1116927_1117322_1117500_1119010_1119165_1119515_1119622_1119905_1120024_1122138_1122283_1122467_1122559_1122657_1122792_1122893_1123046_1123533_1123640_1123941_1124023_1127603_1127766_1132089
transcript_97172.nnic	chr19	+	2580	11	NNC	ENSG00000118046.17	novel	3293	10	NA	NA	-13	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	178.91573435559	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGCTGTGAGGGGTGT	1203653	True	NA	12	True	AATAAA	-13	NA	1205764	1228095	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_1205873_1206262_1207204_1218416_1218501_1219323_1219414_1220372_1220506_1220580_1220718_1221212_1221341_1221948_1222007_1222984_1223173_1226453_1226664_1227592
transcript_97174.known	chr19	+	704	5	FSM	ENSG00000099624.8	ENST00000395633.5	704	5	0	0	0	0	multi-exon	FALSE	canonical	3	958	junction_4	330.846924573888	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCTCGGCTCTTGTT	1222552	True	NA	28	True	ATTAAA	-16	NA	1241745	1244825	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1241992_1242455_1242610_1244096_1244186_1244314_1244441_1244736
transcript_97175.known	chr19	+	995	4	FSM	ENSG00000099624.8	ENST00000215375.7	995	4	0	0	0	0	multi-exon	FALSE	canonical	3	1685	junction_3	37.6769897358528	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCTCGGCTCTTGTT	1222557	True	NA	28	True	ATTAAA	-16	NA	1241750	1244825	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1241992_1242455_1242610_1244096_1244186_1244314
transcript_97177.known	chr19	+	1393	3	FSM	ENSG00000099624.8	ENST00000588538.5	1393	3	0	0	0	0	multi-exon	FALSE	canonical	3	1685	junction_2	7	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCTCGGCTCTTGTT	1222623	True	NA	28	True	ATTAAA	-16	NA	1241816	1244825	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1242610_1244096_1244186_1244314
transcript_97178.known	chr19	+	640	2	FSM	ENSG00000099624.8	ENST00000589478.1	640	2	0	0	0	0	multi-exon	FALSE	canonical	3	1685	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCTCGGCTCTTGTT	1244036	False	NA	28	True	ATTAAA	-16	NA	1244056	1244825	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1244186_1244314
transcript_97183.known	chr19	+	3243	7	FSM	ENSG00000167470.14	ENST00000591446.7	3261	7	18	0	18	0	multi-exon	FALSE	canonical	3	64	junction_3	18.3090748598126	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCTGTAAATTTTTTTGTG	1243960	True	NA	-66	True	NA	NA	NA	1249887	1258699	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1250530_1251561_1251650_1251838_1251902_1254166_1254479_1254901_1255062_1255421_1255695_1256994
transcript_972.nnic	chr1	+	3474	16	NNC	ENSG00000160072.20	novel	4098	16	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	166.031723876292	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCCGTGTCTCTCTATTGA	1464791	True	NA	18	True	AATAAA	-18	NA	1471747	1496202	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr1_+_1472090_1473481_1473757_1477836_1478746_1479048_1479109_1480866_1480937_1482137_1482304_1482544_1482615_1485015_1485172_1485781_1485839_1486109_1486236_1486543_1486669_1487862_1487915_1489203_1489275_1490256_1490425_1490562_1490672_1495484
transcript_97205.known	chr19	+	938	8	FSM	ENSG00000099622.14	ENST00000586636.5	938	8	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_6	333.559773427462	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGCGCACGAGTAGGACC	1262490	True	NA	87	True	AAGAAA	-17	NA	1269346	1274880	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1269411_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1274306_1274441_1274648
transcript_97213.known	chr19	+	1303	7	FSM	ENSG00000099622.14	ENST00000586472.5	1303	7	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	369.221553481857	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCTCTGACAATTCCCT	1266593	True	NA	NA	False	ATTAAA	-18	NA	1266652	1273172	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1266702_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1272426
transcript_97214.known	chr19	+	1459	7	FSM	ENSG00000099622.14	ENST00000588090.5	1459	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	374.63200462439	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCTCTGACAATTCCCT	1267047	False	NA	NA	False	ATTAAA	-18	NA	1267087	1273172	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1267293_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1272426
transcript_97216.known	chr19	+	1328	7	FSM	ENSG00000099622.14	ENST00000320936.9	1328	7	0	0	0	0	multi-exon	FALSE	canonical	3	775	junction_6	94.1855438306042	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCTCTGACAATTCCCT	1262480	True	NA	NA	False	ATTAAA	-18	NA	1269336	1273172	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1269411_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1272426
transcript_97217.known	chr19	+	1073	7	FSM	ENSG00000099622.14	ENST00000589235.5	1073	7	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_6	291.282795006273	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTCTGTGGTTCAGGG	1262493	True	NA	17	True	AATAAA	-23	NA	1269349	1274810	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1269411_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1274306
transcript_97219.nic	chr19	+	3142	7	NIC	ENSG00000099622.14	novel	938	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	317	junction_6	259.895759018025	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTCTGTGGTTCAGGG	1262471	True	NA	17	True	AATAAA	-23	NA	1269327	1274810	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_1269411_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1274441_1274648
transcript_97223.known	chr19	+	870	7	FSM	ENSG00000099622.14	ENST00000585630.5	870	7	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	344.407421845439	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCTGACCGCTTCTGA	1269225	False	NA	55	True	NA	NA	NA	1269265	1272582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1269411_1270866_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1272426
transcript_97224.known	chr19	+	942	7	FSM	ENSG00000099622.14	ENST00000586773.5	942	7	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	410.667613635272	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCCCCGCCTGGAGCCCG	1269286	False	NA	NA	False	NA	NA	NA	1269326	1274595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1269411_1270866_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1274306
transcript_97227.known	chr19	+	3346	6	FSM	ENSG00000099622.14	ENST00000587896.6	3346	6	0	0	0	0	multi-exon	FALSE	canonical	3	944	junction_1	40.7303326772566	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTCTGTGGTTCAGGG	1262475	True	NA	17	True	AATAAA	-23	NA	1269331	1274810	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1269411_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980
transcript_97230.known	chr19	+	650	6	FSM	ENSG00000099622.14	ENST00000593048.5	650	6	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_2	358.834223562915	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGCCGGGATGGCCTCGTT	1262479	True	NA	73	True	NA	NA	NA	1269335	1272600	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1269411_1270927_1271037_1271328_1271468_1271550_1271633_1271980_1272052_1272426
transcript_97232.known	chr19	+	1835	6	FSM	ENSG00000099622.14	ENST00000589710.5	1835	6	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	376.4781002927	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCTCTGACAATTCCCT	1269225	False	NA	NA	False	ATTAAA	-18	NA	1269265	1273172	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1269411_1270866_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980
transcript_97234.known	chr19	+	587	4	FSM	ENSG00000099622.14	ENST00000591659.5	587	4	0	0	0	0	multi-exon	FALSE	canonical	3	944	junction_1	39.2031744746377	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGCCGGCCCAAGCACAG	1262494	True	NA	NA	False	GGGGCT	-36	NA	1269350	1271639	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1269411_1270927_1271037_1271139_1271247_1271328
transcript_97238.known	chr19	+	769	2	FSM	ENSG00000099622.14	ENST00000589161.1	769	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCCAGCAAGATGCAACAT	1261527	False	NA	NA	False	NA	NA	NA	1261820	1264698	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1262144_1264252
transcript_97240.known	chr19	-	1356	2	FSM	ENSG00000267493.4	ENST00000585832.3	1356	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGTGCCTAGTTATTAAG	-1270030	False	NA	-3	True	NA	NA	NA	1270260	1267470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1268391_1269824
transcript_97242.known	chr19	+	1052	9	FSM	ENSG00000099622.14	ENST00000585914.5	1052	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	474.444411917771	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGGATTCGAATAAAGGGCC	1262495	True	NA	-20	True	NA	NA	NA	1269351	1274773	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1269411_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1273493_1273716_1274306_1274445_1274648
transcript_97243.known	chr19	+	668	3	FSM	ENSG00000228300.14	ENST00000469144.5	668	3	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_1	158.5	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACCTCTAGACCCGTGC	1273311	True	NA	27	True	AATAAA	-35	NA	1276020	1279244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1276104_1277182_1277300_1278776
transcript_97246.known	chr19	+	751	3	FSM	ENSG00000228300.14	ENST00000590269.2	751	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	237.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCCAGTGCCCAGCAACC	1276042	False	NA	NA	False	NA	NA	NA	1276099	1278836	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1276674_1277182_1277300_1278776
transcript_97247.known	chr19	+	870	3	FSM	ENSG00000228300.14	ENST00000409293.6	870	3	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	117.5	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGCTGACCCCATGCC	1270966	True	NA	11	True	AATAAA	-19	NA	1275529	1279228	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1275831_1277182_1277300_1278776
transcript_97248.known	chr19	+	1675	2	FSM	ENSG00000228300.14	ENST00000485191.5	1675	2	0	0	0	0	multi-exon	FALSE	canonical	3	483	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACCTCTAGACCCGTGC	1276037	False	NA	27	True	AATAAA	-35	NA	1276092	1279244	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1277300_1278776
transcript_97249.known	chr19	+	2424	4	FSM	ENSG00000099617.4	ENST00000215368.4	2424	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	1.63299316185545	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGTGTGTCTGTATGTGGG	1285445	True	NA	NA	False	AATAAA	-19	NA	1285872	1301431	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1286309_1295544_1295859_1298550_1298617_1299823
transcript_97272.nic	chr19	+	2642	14	NIC	ENSG00000160953.17	novel	4232	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	144	junction_1	91.310640870025	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGCATCTGATATTAAAC	NA	False	NA	17	True	NA	NA	NA	1354921	1376917	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_1355021_1356323_1356450_1357008_1357095_1358393_1358465_1360135_1361033_1362249_1362352_1364508_1364580_1366304_1366382_1367159_1367221_1369264_1369341_1369595_1369647_1370641_1371079_1373071_1373161_1376518
transcript_97273.nic	chr19	+	4154	14	NIC	ENSG00000160953.17	novel	4232	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	144	junction_1	91.310640870025	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCTTGTCTTTTCTGAA	NA	False	NA	21	True	ATTAAA	-14	NA	1354921	1378429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_1355021_1356323_1356450_1357008_1357095_1358393_1358465_1360135_1361033_1362249_1362352_1364508_1364580_1366304_1366382_1367159_1367221_1369264_1369341_1369595_1369647_1370641_1371079_1373071_1373161_1376518
transcript_97279.known	chr19	+	4232	14	FSM	ENSG00000160953.17	ENST00000591337.7	4232	14	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	91.7181171729527	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCTTGTCTTTTCTGAA	1351176	True	NA	21	True	ATTAAA	-14	NA	1354958	1378429	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1355136_1356323_1356450_1357008_1357095_1358393_1358465_1360135_1361033_1362249_1362352_1364508_1364580_1366304_1366382_1367159_1367221_1369264_1369341_1369595_1369647_1370641_1371079_1373071_1373161_1376518
transcript_9729.nic	chr1	-	2793	13	NIC	ENSG00000173406.16	novel	5301	15	NA	NA	-35	683	combination_of_known_junctions	TRUE	canonical	3	19	junction_6	23.2216075144585	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTGCTGCTGTGTTGCT	-57422514	True	NA	-1	True	AATAAA	-23	NA	57424095	56997215	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_56998129_57010679_57010791_57011144_57011273_57014882_57015432_57023530_57023640_57025980_57026044_57062883_57062944_57071521_57071642_57072282_57072415_57136542_57136642_57145289_57145430_57290963_57291167_57423929
transcript_97311.known	chr19	+	522	3	FSM	ENSG00000160953.17	ENST00000592374.6	522	3	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	124.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAAGTGTTGTGTTGTTTT	NA	False	NA	NA	False	AAGAAA	-43	NA	1354710	1357094	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1355021_1356323_1356450_1357008
transcript_97314.nic	chr19	+	1492	3	ISM	ENSG00000160953.17	ENST00000591337.7	4232	14	7	20225	-6	1110	5prime_fragment	FALSE	canonical	3	142	junction_1	125.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCACCAGGGTTCTTGC	1351183	True	NA	NA	False	TTTAAA	-44	NA	1354965	1358204	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_1355136_1356323_1356450_1357008
transcript_97316.known	chr19	+	869	9	FSM	ENSG00000115286.21	ENST00000546172.7	869	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	746.278893912993	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCAGTGTGGTGTGTGGGT	1361032	True	NA	25	True	AATAAA	-21	NA	1383917	1395584	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1383943_1386517_1386640_1387810_1387848_1388524_1388594_1388832_1388939_1390870_1391051_1391118_1391166_1393241_1393331_1395390
transcript_97319.known	chr19	+	1743	8	FSM	ENSG00000115286.21	ENST00000539480.5	1743	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	605.168554695167	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGTGTGTGGGTGAAAG	1361014	True	NA	30	True	AATAAA	-26	NA	1383899	1395589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1383943_1387810_1387848_1388524_1388594_1388832_1388939_1390870_1391051_1391118_1391166_1393241_1393331_1394417
transcript_97320.known	chr19	+	745	8	FSM	ENSG00000115286.21	ENST00000534853.5	745	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	604.251569450733	1307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCGCCTCCCAGTGTGGT	1361021	True	NA	17	True	AATAAA	-13	NA	1383906	1395576	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1383938_1387810_1387848_1388524_1388594_1388832_1388939_1390870_1391051_1391118_1391166_1393241_1393331_1395390
transcript_97328.known	chr19	+	2818	7	FSM	ENSG00000115286.21	ENST00000313408.11	2818	7	0	0	0	0	multi-exon	FALSE	canonical	3	1158	junction_1	220.897915084975	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCCAGTGTGGTGTGTG	1361018	True	NA	22	True	AATAAA	-18	NA	1383903	1395581	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1383943_1387810_1387848_1388524_1388594_1388832_1388939_1390870_1391051_1391118_1391166_1393241
transcript_97334.known	chr19	+	630	7	FSM	ENSG00000115286.21	ENST00000538929.5	630	7	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_1	639.232200030283	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGTAGGGCCGGGACCGC	1361165	False	NA	NA	False	GGGGCT	-33	NA	1384050	1393326	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1384157_1387810_1387848_1388524_1388594_1388832_1388939_1390870_1391051_1391118_1391166_1393241
transcript_97336.known	chr19	+	1186	6	FSM	ENSG00000115286.21	ENST00000538662.5	1186	6	0	0	0	0	multi-exon	FALSE	canonical	3	1158	junction_1	235.525794765669	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTGCATACCTGAAATTCA	1361014	True	NA	NA	False	AAAAAG	-7	NA	1383899	1393877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1383943_1387810_1387848_1388524_1388594_1388832_1388939_1390870_1391166_1393241
transcript_97340.known	chr19	+	3089	6	FSM	ENSG00000115286.21	ENST00000545446.5	3089	6	0	0	0	0	multi-exon	FALSE	canonical	3	1158	junction_1	225.659921120256	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCAGTGTGGTGTGTGGGT	1383852	False	NA	25	True	AATAAA	-21	NA	1383874	1395584	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1383943_1387810_1387848_1388524_1388939_1390870_1391051_1391118_1391166_1393241
transcript_97347.known	chr19	+	3743	1	FSM	ENSG00000115286.21	ENST00000591358.1	3743	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCAGTGTGGTGTGTGGGT	1391824	False	NA	25	True	AATAAA	-21	NA	1391841	1395584	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1391800_1395600
transcript_97349.known	chr19	-	1110	6	FSM	ENSG00000130005.13	ENST00000252288.8	1110	6	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_1	27.7171427098826	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGTGACTCCCCTCCA	-1397436	True	NA	58	True	NA	NA	NA	1401542	1397025	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1397500_1398915_1399027_1399127_1399196_1399523_1399588_1399792_1399939_1401295
transcript_97354.known	chr19	-	1769	5	FSM	ENSG00000130005.13	ENST00000447102.8	1769	5	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_2	17.7816619020833	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGGTGTGATTCTTTG	-1397464	True	NA	-1	True	NA	NA	NA	1401570	1397810	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1399027_1399127_1399196_1399523_1399588_1399792_1399939_1401295
transcript_97358.nnic	chr19	-	880	4	NIC	ENSG00000130005.13	novel	1769	5	NA	NA	5	-3	intron_retention	FALSE	canonical	3	44	junction_2	173.908660572791	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGCTGGGCGTGGTGGCGT	-1397431	True	NA	-9	True	AATACA	-6	NA	1401537	1398602	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_1399027_1399127_1399196_1399792_1399939_1401295
transcript_97364.known	chr19	+	2290	13	FSM	ENSG00000071626.17	ENST00000336761.10	2290	13	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_12	450.078349660738	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTTGTGTCCGTTTTTT	1396290	True	NA	33	True	AATAAA	-24	NA	1407568	1435684	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1407803_1417499_1417541_1418203_1418371_1418665_1418732_1421147_1421259_1422347_1422397_1425877_1425961_1428841_1428996_1429966_1429997_1430221_1430363_1432513_1432691_1433738_1433828_1434736
transcript_97373.known	chr19	+	2086	12	FSM	ENSG00000071626.17	ENST00000587079.5	2086	12	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_4	277.981181359607	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACTTTGTGTCCGTTTTT	1407595	False	NA	32	True	AATAAA	-23	NA	1407679	1435683	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1407803_1417499_1417541_1418203_1418371_1418665_1418732_1421150_1421259_1422347_1422397_1425877_1425961_1428841_1428996_1429966_1429997_1430221_1430363_1432513_1432691_1434736
transcript_97397.known	chr19	+	1021	10	FSM	ENSG00000071626.17	ENST00000592453.2	1021	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	394.833860981778	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGGTCTCCTGCCATG	1407566	False	NA	NA	False	NA	NA	NA	1407734	1432690	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1407803_1417499_1417541_1418203_1418371_1421147_1421259_1422347_1422397_1425877_1425961_1428841_1428996_1429966_1429997_1430221_1430363_1432513
transcript_97409.known	chr19	+	711	5	FSM	ENSG00000115268.10	ENST00000591804.6	711	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	8621.60954738151	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	1307606	True	NA	29	True	AATAAA	-17	NA	1438405	1440494	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1438429_1438806_1438893_1439605_1439827_1440018_1440254_1440348
transcript_97410.known	chr19	+	550	4	FSM	ENSG00000115268.10	ENST00000591032.1	550	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	8198.03368023224	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTCCTTTGCGCAGCTT	1307600	True	NA	25	True	AATAAA	-13	NA	1438399	1440490	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1438429_1438806_1438893_1439960_1440254_1440348
transcript_97411.known	chr19	+	467	4	FSM	ENSG00000115268.10	ENST00000585665.2	467	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	8176.43227004704	5197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	1307622	True	NA	29	True	AATAAA	-17	NA	1438421	1440494	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1438429_1438806_1438893_1440025_1440254_1440348
transcript_97413.known	chr19	+	629	4	FSM	ENSG00000115268.10	ENST00000593052.5	629	4	0	0	0	0	multi-exon	FALSE	canonical	3	1070	junction_1	8870.42922674358	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	1307619	True	NA	29	True	AATAAA	-17	NA	1438418	1440494	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1438581_1438806_1438893_1440018_1440254_1440348
transcript_97414.known	chr19	+	570	3	FSM	ENSG00000115268.10	ENST00000586096.3	570	3	0	0	0	0	multi-exon	FALSE	canonical	3	14741	junction_1	2882.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	1307621	True	NA	29	True	AATAAA	-17	NA	1438420	1440494	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1438429_1438806_1438893_1440018
transcript_97415.known	chr19	+	1602	3	FSM	ENSG00000115268.10	ENST00000592700.2	1602	3	0	0	0	0	multi-exon	FALSE	canonical	3	14741	junction_1	2229.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	1307620	True	NA	29	True	AATAAA	-17	NA	1438419	1440494	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1438429_1438806_1440254_1440348
transcript_97417.known	chr19	+	873	3	FSM	ENSG00000115268.10	ENST00000592623.5	873	3	0	0	0	0	multi-exon	FALSE	canonical	3	19200	junction_2	653	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	1307601	True	NA	29	True	AATAAA	-17	NA	1438400	1440494	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1438893_1440018_1440254_1440348
transcript_97418.known	chr19	+	1100	1	FSM	ENSG00000268798.1	ENST00000594262.1	1100	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1440024	False	NA	NA	False	NA	NA	NA	1440838	1441938	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1440800_1441900
transcript_97424.known	chr19	-	853	3	FSM	ENSG00000119559.17	ENST00000588427.5	853	3	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	170	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGACACACTGCACCAGG	-1472679	True	NA	NA	False	NA	NA	NA	1479201	1461142	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1461825_1478773_1478906_1479162
transcript_97425.known	chr19	-	1287	3	FSM	ENSG00000119559.17	ENST00000592872.5	1287	3	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_2	207.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCCGTCTGAATGGTGC	-1472661	True	NA	-12	True	CATAAA	-14	NA	1479183	1474173	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1475259_1478773_1478906_1479113
transcript_97426.known	chr19	-	1265	3	FSM	ENSG00000119559.17	ENST00000586564.5	1265	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	225.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTGAATGGTGCCTCTGT	-1472659	True	NA	-6	True	CATAAA	-20	NA	1479181	1474167	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1475259_1478773_1478906_1479139
transcript_97427.known	chr19	-	2243	3	FSM	ENSG00000119559.17	ENST00000585675.6	2243	3	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_2	74	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGACGGTGTCGTCCTTAC	-1472693	True	NA	0	True	ATTAAA	-18	NA	1479215	1473200	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1475259_1478773_1478906_1479162
transcript_97429.known	chr19	-	1524	3	FSM	ENSG00000119559.17	ENST00000651077.1	1524	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	167.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGCCGTCTGAATGGT	-1472693	True	NA	-14	True	CATAAA	-12	NA	1479215	1474175	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1475515_1478773_1478906_1479162
transcript_97431.known	chr19	-	1410	3	FSM	ENSG00000119559.17	ENST00000427685.2	1410	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	177	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTGAGCGGCTCCGTC	-1472694	True	NA	7	True	CATAAA	-33	NA	1479216	1474154	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1475259_1478653_1478906_1479162
transcript_97438.known	chr19	-	357	3	FSM	ENSG00000119559.17	ENST00000592605.1	357	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	165.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTTAGCTGGGCATAGT	-1472697	True	NA	NA	False	AATGAA	-33	NA	1479219	1478412	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1478581_1478773_1478906_1479162
transcript_97440.known	chr19	-	911	1	FSM	ENSG00000267317.2	ENST00000591252.2	911	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGTGCAGTAGCATGAT	NA	False	NA	-4	True	AATAAA	-35	NA	1458580	1457669	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1457700_1458600
transcript_97441.known	chr19	+	1360	5	FSM	ENSG00000115255.12	ENST00000233596.8	1360	5	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_4	13.0072095393286	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGCCACGTGTGCGG	1489276	True	NA	27	True	AATAAA	-17	NA	1491180	1497927	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1491385_1495293_1495388_1495468_1495608_1496284_1496454_1497173
transcript_97459.known	chr19	-	5678	7	FSM	ENSG00000071655.18	ENST00000434436.8	5678	7	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_6	209.478519185142	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTGCCTGCCTTCCTTC	-1592850	False	NA	-1	True	AATAAA	-17	NA	1592865	1573595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1578159_1578334_1578539_1581091_1581270_1582621_1582713_1584539_1584678_1585054_1585215_1592521
transcript_97460.known	chr19	-	5518	7	FSM	ENSG00000071655.18	ENST00000156825.5	5518	7	0	0	0	0	multi-exon	FALSE	canonical	3	511	junction_6	63.9003129882789	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTGCCTGCCTTCCTTC	-1589058	True	NA	-1	True	AATAAA	-17	NA	1592801	1573595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1578159_1578334_1578539_1581091_1581270_1582621_1582713_1584539_1584678_1585054_1585215_1592617
transcript_97461.known	chr19	-	1002	7	FSM	ENSG00000267059.2	ENST00000585937.1	1002	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	1728.25046410139	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGTGCTGCGGGGCCACG	-1586558	True	NA	NA	False	NA	NA	NA	1605445	1578338	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1578539_1581091_1581270_1582621_1582713_1584539_1584678_1585054_1585215_1599411_1599561_1605359
transcript_97470.nic	chr19	-	2666	6	NIC	ENSG00000071655.18	novel	5518	7	NA	NA	-16	0	intron_retention	FALSE	canonical	3	511	junction_5	69.4100857224654	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTGAGCTTCTGTCTTTG	-1589074	True	NA	-6	True	NA	NA	NA	1592817	1576639	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_1578539_1581091_1581270_1582621_1582713_1584539_1584678_1585054_1585215_1592617
transcript_9748.nic	chr1	-	1918	9	NIC	ENSG00000162600.12	novel	1861	9	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_8	37.2323783822629	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTTCTACTTGCTTT	-58545515	True	NA	1	True	AATAAA	-19	NA	58546744	58480718	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_58481175_58506059_58506210_58527260_58527336_58530600_58530730_58533952_58534061_58534157_58534332_58536512_58536742_58538794_58539311_58546663
transcript_97482.known	chr19	-	533	4	FSM	ENSG00000127540.12	ENST00000593029.1	533	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	2583.06833049379	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTGCCCGGATGTTGAT	-1586556	True	NA	-24	True	ATTAAA	-16	NA	1605443	1598048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1598216_1599411_1599561_1602293_1602427_1605359
transcript_97483.known	chr19	-	1299	3	FSM	ENSG00000127540.12	ENST00000591899.8	1299	3	0	0	0	0	multi-exon	FALSE	canonical	3	5127	junction_2	187.5	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGTACAAAGTCACACTC	-1586575	True	NA	-24	True	AATAAA	-24	NA	1605462	1597168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1598216_1599411_1599561_1605359
transcript_97486.known	chr19	-	753	2	FSM	ENSG00000127540.12	ENST00000585671.2	753	2	0	0	0	0	multi-exon	FALSE	canonical	3	5127	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTGCTCTTACACCCCCA	-1586586	True	NA	NA	False	NA	NA	NA	1605473	1598921	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1599561_1605359
transcript_97488.known	chr19	-	504	3	FSM	ENSG00000127540.12	ENST00000589880.1	504	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2563.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTGCCCGGATGTTGAT	-1586549	True	NA	-24	True	ATTAAA	-16	NA	1605436	1598048	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1598327_1599411_1599561_1605359
transcript_9749.nic	chr1	-	1950	9	NIC	ENSG00000162600.12	novel	1861	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_8	43.7914089748206	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTTCTACTTGCTTT	-58545573	True	NA	1	True	AATAAA	-19	NA	58546802	58480718	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_58481175_58506059_58506210_58527260_58527336_58530600_58530730_58533952_58534061_58534157_58534332_58536512_58536742_58538794_58539311_58546689
transcript_9750.known	chr1	-	1861	9	FSM	ENSG00000162600.12	ENST00000371226.8	1861	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	52.1019133525824	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTTCTACTTGCTTT	-58545497	True	NA	1	True	AATAAA	-19	NA	58546726	58480718	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_58481175_58506059_58506210_58527260_58527336_58530600_58530730_58533952_58534061_58534157_58534332_58536512_58536742_58538794_58539311_58546702
transcript_9752.known	chr1	-	1820	1	FSM	ENSG00000184292.7	ENST00000371225.4	1820	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACCAGAAGTCGGCATTT	-58577168	False	NA	-6	True	AATAAA	-31	NA	58577252	58575432	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_58575400_58577300
transcript_97543.nnic	chr19	-	2637	17	NNC	ENSG00000071564.17	novel	4735	19	NA	NA	-21	-2	intron_retention	TRUE	non_canonical	0	0	junction_16	288.502572562187	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCCGTGTAAACCTGAGC	-1642958	True	NA	-17	True	ATTAAA	-15	NA	1652636	1610966	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_1611850_1615284_1615521_1615685_1615822_1619110_1619235_1619315_1619475_1619779_1619854_1620967_1621047_1621132_1621192_1621837_1621971_1622053_1622224_1622312_1622416_1623950_1624001_1625575_1625709_1627358_1627427_1632037_1632117_1632331_1632369_1652522
transcript_97548.nnic	chr19	-	2548	17	NNC	ENSG00000071564.17	novel	4735	19	NA	NA	-21	0	intron_retention	FALSE	non_canonical	0	0	junction_16	288.502572562187	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCGTGTCTCTCGCTATT	-1642958	True	NA	-37	True	TATAAA	-2	NA	1652636	1611055	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_1611850_1615284_1615521_1615685_1615822_1619110_1619235_1619315_1619475_1619779_1619854_1620967_1621047_1621132_1621192_1621837_1621971_1622053_1622224_1622312_1622416_1623950_1624001_1625575_1625709_1627358_1627427_1632037_1632117_1632331_1632369_1652522
transcript_97557.known	chr19	-	1751	5	FSM	ENSG00000071564.17	ENST00000592628.5	1751	5	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	480.74388971676	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGCAGTCCCCGGGTT	-1619074	False	18	-8	True	AATAAA	-19	NA	1619135	1609292	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1610501_1611703_1611850_1615284_1615521_1615685_1615822_1619110
transcript_97558.known	chr19	-	1313	5	FSM	ENSG00000071564.17	ENST00000590684.5	1313	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	590.686623769321	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCGTGTCTCTCGCTATT	-1619286	False	NA	-37	True	TATAAA	-2	NA	1619347	1611055	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1611850_1612206_1612434_1615685_1615822_1619110_1619235_1619315
transcript_97560.nic	chr19	-	2882	14	NIC	ENSG00000130270.16	novel	5095	29	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_2	3.68749686590981	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTGTTTTTTGTTTT	NA	False	NA	-8	True	AATAAA	-13	NA	1812296	1798763	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_1800156_1800258_1800450_1801955_1802045_1802486_1802646_1805373_1805457_1805887_1805959_1806096_1806170_1806627_1806690_1807167_1807267_1808221_1808336_1809642_1809735_1810621_1810684_1811600_1811885_1812185
transcript_97565.nic	chr19	-	2627	9	ISM	ENSG00000130270.16	ENST00000310127.10	5095	29	21369	2	-90	0	3prime_fragment	FALSE	canonical	2	7	junction_7	9.98044963916957	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCAGGCTCCCTCTTTCC	NA	False	NA	-24	True	AATAAA	-26	NA	1790907	1782076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_1783271_1784818_1784947_1785158_1785298_1785468_1785709_1787102_1787187_1788896_1789121_1789360_1789728_1789889_1789990_1790756
transcript_97568.nic	chr19	-	2501	8	NIC	ENSG00000130270.16	novel	5095	29	NA	NA	-64	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_7	9.66373401445015	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCAGGCTCCCTCTTTCC	-1790732	True	NA	-24	True	AATAAA	-26	NA	1790881	1782076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_1783271_1784818_1784947_1785158_1785298_1785468_1785709_1787102_1787187_1788896_1789121_1789360_1789728_1790756
transcript_97579.known	chr19	-	4609	16	FSM	ENSG00000079313.15	ENST00000170168.9	4609	16	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_14	21.4563122025509	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTGTGGTGGTCTTGGT	-1846387	True	NA	-5	True	AATAAA	-18	NA	1848483	1815247	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1816155_1816224_1816346_1816430_1816570_1816697_1816814_1817218_1817330_1817706_1817781_1818481_1818596_1818705_1818844_1819017_1819132_1819933_1820058_1820263_1820396_1821518_1821683_1823571_1823786_1825838_1825944_1826877_1828632_1848201
transcript_97584.nic	chr19	-	1276	2	ISM	ENSG00000079313.15	ENST00000170168.9	4609	16	-10	12400	-10	0	5prime_fragment	FALSE	canonical	3	113	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGGGCCCCACCTGCCCCC	-1846397	True	NA	NA	False	AAGAAA	-5	NA	1848493	1827647	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_1828632_1848201
transcript_97585.known	chr19	-	1390	3	FSM	ENSG00000079313.15	ENST00000587524.1	1390	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGGGCCCCACCTGCCCCC	-1846350	True	NA	NA	False	AAGAAA	-5	NA	1848446	1827647	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1828632_1830705_1830867_1848201
transcript_97589.nnic	chr19	-	2525	2	NNC	ENSG00000129911.9	novel	2901	2	NA	NA	7441	-1	intron_retention	FALSE	canonical	2	16	junction_1	0	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCAGCGTGTGTGTGGT	-1855388	False	NA	-3	True	ATTAAA	-20	NA	1855417	1852400	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_1854761_1855252
transcript_97590.known	chr19	-	508	2	FSM	ENSG00000129911.9	ENST00000592313.1	508	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTGAGACTGGACCTGGG	-1862829	False	339	NA	False	NA	NA	NA	1862858	1854317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1854761_1862793
transcript_97591.known	chr19	-	1299	1	FSM	ENSG00000261526.2	ENST00000565797.2	1299	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTTGGCTCATTTTTCT	-1873734	False	2435	1	True	TATAAA	-33	NA	1876169	1874870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1874900_1876200
transcript_97592.known	chr19	-	1630	6	FSM	ENSG00000129968.17	ENST00000250974.9	1630	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	258.554752421997	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTGCTCTCCTTCCTTTC	-1882998	True	NA	-15	True	ATTAAA	-15	NA	1885433	1876975	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1877426_1877507_1877688_1879920_1880116_1880895_1881049_1881234_1881805_1885351
transcript_97595.known	chr19	-	1706	5	FSM	ENSG00000129968.17	ENST00000292577.12	1706	5	0	0	0	0	multi-exon	TRUE	canonical	3	510	junction_4	27.7702628723604	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGAGCCCTTAGGGAGCT	-1883061	True	NA	NA	False	NA	NA	NA	1885496	1876809	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1877426_1877507_1877688_1879920_1880116_1881234_1881805_1885351
transcript_97596.known	chr19	-	1679	5	FSM	ENSG00000129968.17	ENST00000677868.1	1679	5	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	222.253233947225	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGAGCCCTTAGGGAGCT	-1883061	True	NA	NA	False	NA	NA	NA	1885496	1876809	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_1877426_1877507_1877688_1879920_1880116_1881261_1881805_1885351
transcript_9760.known	chr1	-	7192	20	FSM	ENSG00000162601.11	ENST00000665648.1	7192	20	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_7	61.6279157525224	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATCTGAGTTGTTTTTAT	-58689713	True	NA	NA	False	NA	NA	NA	58700072	58655397	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_58660156_58661169_58661228_58661405_58661512_58665498_58665632_58667037_58667227_58667846_58667922_58668429_58668567_58668983_58669039_58671869_58671959_58673572_58673651_58675476_58675581_58676925_58677057_58681784_58682546_58685152_58685252_58689037_58689117_58690225_58690250_58690339_58690418_58692860_58692932_58695128_58695208_58699984
transcript_97601.nnic	chr19	+	2800	9	NNC	ENSG00000227500.10	novel	2501	7	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_5	117.196149680781	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTAGAGCCAGGGACCTG	1901861	True	NA	4	True	AATAAA	-13	NA	1905343	1926005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_1905440_1914978_1915027_1917693_1917823_1918126_1918284_1918888_1918991_1920647_1920852_1920961_1921010_1923069_1923188_1924107
transcript_97609.known	chr19	+	2501	7	FSM	ENSG00000227500.10	ENST00000316097.13	2501	7	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_5	37.1797435888594	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGGACCTGCCGCGTTT	1901916	True	NA	12	True	AATAAA	-21	NA	1905398	1926013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1905440_1914978_1915027_1917693_1917823_1918126_1918284_1918888_1918991_1923069_1923188_1924107
transcript_9761.known	chr1	-	7751	20	FSM	ENSG00000162601.11	ENST00000472487.6	7751	20	0	0	0	0	multi-exon	TRUE	canonical	3	142	junction_7	38.7825816915182	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATCATTTGGATTATTTC	-58689703	True	NA	-21	True	AATAAA	-15	NA	58700062	58654742	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_58660156_58661169_58661228_58661405_58661512_58665498_58665632_58667037_58667227_58667846_58667922_58668631_58668683_58668983_58669039_58671869_58671959_58673572_58673651_58675476_58675581_58676925_58677057_58681784_58682546_58685152_58685252_58689037_58689117_58690225_58690250_58690339_58690418_58692860_58692932_58695128_58695208_58699984
transcript_97615.known	chr19	+	2394	6	FSM	ENSG00000227500.10	ENST00000409472.5	2394	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	107.418061795957	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGGACCTGCCGCGTTT	1901921	True	NA	12	True	AATAAA	-21	NA	1905403	1926013	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1905440_1914978_1915027_1917693_1917823_1918126_1918284_1923069_1923188_1924107
transcript_97616.known	chr19	+	1477	6	FSM	ENSG00000227500.10	ENST00000414057.6	1477	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	105.429787062291	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCAAACCCAGCAAACCGG	1901895	True	NA	NA	False	NA	NA	NA	1905377	1925016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1905440_1917693_1917823_1918126_1918284_1918888_1918991_1923069_1923188_1924107
transcript_97617.known	chr19	+	718	5	FSM	ENSG00000227500.10	ENST00000452128.6	718	5	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_1	16.4829457318769	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTAGGGAGGGGTCCGAG	1901889	True	NA	NA	False	NA	NA	NA	1905371	1919204	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1905440_1914978_1915027_1917693_1917823_1918126_1918284_1918888
transcript_97620.known	chr19	+	1599	2	FSM	ENSG00000213638.6	ENST00000329478.4	1599	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTGTCTGTTAGGAGGT	1901916	True	NA	13	True	AATAAA	-15	NA	1905398	1913447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1905440_1911889
transcript_97624.known	chr19	+	2895	12	FSM	ENSG00000133275.16	ENST00000255641.13	2895	12	0	0	0	0	multi-exon	TRUE	canonical	3	670	junction_2	42.1616331014955	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGTGTAGAGGGATTTG	1933192	True	NA	NA	False	AATAAA	-18	NA	1941171	1981338	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_1941419_1969507_1969960_1978304_1978346_1978441_1978512_1978601_1978751_1978858_1979094_1979162_1979249_1979318_1979404_1979494_1979644_1979751_1979836_1979910_1980018_1980148
transcript_97637.nic	chr19	+	3034	10	NIC	ENSG00000133275.16	novel	2895	12	NA	NA	20	0	intron_retention	FALSE	canonical	3	670	junction_2	38.7483173668926	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGTGTAGAGGGATTTG	1933212	True	NA	NA	False	AATAAA	-18	NA	1941191	1981338	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_1941419_1969507_1969960_1978304_1978346_1978441_1978751_1978858_1979249_1979318_1979404_1979494_1979644_1979751_1979836_1979910_1980018_1980148
transcript_97644.nic	chr19	-	2707	11	NIC	ENSG00000133243.10	novel	2629	9	NA	NA	-120	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_9	232.073458198046	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGCGCACACTGCTTTG	-2034987	False	NA	-29	True	AATAAA	-18	NA	2035001	1985447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_1986650_1986829_1986977_1987165_1987254_1987499_1987693_1990003_1990202_1990716_1990823_1993019_1993177_1997343_1997464_2017182_2017301_2028707_2028835_2034750
transcript_97647.nic	chr19	-	2468	10	NIC	ENSG00000133243.10	novel	2629	9	NA	NA	-8	0	combination_of_known_junctions	TRUE	canonical	2	2	junction_9	211.906688059732	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGCGCACACTGCTTTG	-2034875	False	396	-29	True	AATAAA	-18	NA	2034889	1985447	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_1986650_1986829_1986977_1987165_1987254_1987499_1987693_1990003_1990202_1990716_1990823_1993019_1993177_1997343_1997464_2017182_2017301_2034750
transcript_97652.known	chr19	-	1744	14	FSM	ENSG00000099875.16	ENST00000309340.11	1744	14	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	100.410695109175	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGTTTTAGTTTTCTGT	-2042147	True	NA	-3	True	AATAAA	-22	NA	2051224	2037464	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2037830_2040133_2040178_2041039_2041205_2041839_2042035_2042426_2042523_2042606_2042663_2042765_2042871_2043123_2043198_2043502_2043583_2046185_2046284_2046366_2046469_2046603_2046692_2050800_2050948_2051095
transcript_97653.known	chr19	-	3785	14	FSM	ENSG00000099875.16	ENST00000250896.9	3785	14	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_11	70.5336379526835	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCCTGAGTTTTAGTT	-2042167	True	NA	-9	True	AATAAA	-16	NA	2051244	2037470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2039857_2040133_2040178_2041039_2041205_2041839_2042035_2042426_2042523_2042606_2042663_2042765_2042871_2043123_2043198_2043502_2043583_2046185_2046284_2046366_2046469_2046603_2046692_2050800_2050948_2051095
transcript_97654.nic	chr19	-	3720	14	NIC	ENSG00000099875.16	novel	3785	14	NA	NA	-57	0	intron_retention	FALSE	canonical	3	15	junction_13	132.061174635673	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCCTGAGTTTTAGTT	NA	False	NA	-9	True	AATAAA	-16	NA	2051301	2037470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_2039857_2040133_2040178_2041039_2041205_2041839_2042035_2042426_2042523_2042606_2042663_2042765_2042871_2043123_2043198_2043502_2043583_2046185_2046284_2046366_2046469_2046603_2046692_2050800_2050948_2051217
transcript_97659.nic	chr19	-	3925	13	NIC	ENSG00000099875.16	novel	3785	14	NA	NA	-5	0	intron_retention	FALSE	canonical	3	341	junction_12	53.5677141569435	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCCTGAGTTTTAGTT	-2042172	True	NA	-9	True	AATAAA	-16	NA	2051249	2037470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_2039857_2040133_2040178_2041039_2041205_2041839_2042035_2042426_2042523_2042606_2042663_2042765_2042871_2043123_2043198_2043502_2043583_2046185_2046284_2046366_2046692_2050800_2050948_2051095
transcript_97663.known	chr19	-	875	4	FSM	ENSG00000099875.16	ENST00000591142.5	875	4	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	168.859573479135	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGTTTTAGTTTTCTGT	-2033063	False	NA	-3	True	AATAAA	-22	NA	2042140	2037464	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2037830_2040133_2040178_2041039_2041205_2041839
transcript_97664.nic	chr19	-	2911	4	ISM	ENSG00000099875.16	ENST00000250896.9	3785	14	9089	0	-15	0	3prime_fragment	FALSE	canonical	3	392	junction_1	64.3652770435185	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCCTGAGTTTTAGTT	-2033078	False	NA	-9	True	AATAAA	-16	NA	2042155	2037470	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_2039857_2040133_2040178_2041039_2041205_2041839
transcript_97666.nic	chr19	-	2744	4	ISM	ENSG00000099875.16	ENST00000250896.9	3785	14	9095	161	-9	-159	3prime_fragment	FALSE	canonical	3	392	junction_1	64.3652770435185	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCAAAAGTTTTTTTAAAG	-2033072	False	NA	-121	True	TTTAAA	-21	NA	2042149	2037631	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_2039857_2040133_2040178_2041039_2041205_2041839
transcript_97668.known	chr19	-	631	3	FSM	ENSG00000099875.16	ENST00000591588.1	631	3	0	0	0	0	multi-exon	FALSE	canonical	3	521	junction_1	7	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGGCATGAAGCCCCTTC	-2033005	False	9077	NA	False	GGGGCT	-5	NA	2042082	2039954	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2040178_2041039_2041205_2041839
transcript_97670.known	chr19	+	869	8	FSM	ENSG00000099840.14	ENST00000395296.5	869	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	2.38190457150472	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCAGAAGAGTTCTTGTT	NA	False	NA	12	True	ATTAAA	-17	NA	2096942	2099584	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2097163_2097251_2097333_2097423_2097496_2097928_2097956_2098051_2098128_2098286_2098335_2098435_2098451_2099254
transcript_97671.known	chr19	+	864	7	FSM	ENSG00000099840.14	ENST00000591894.5	864	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	2.3094010767585	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGGAGGGGGTAAAGGGAG	2096965	True	NA	NA	False	NA	NA	NA	2096997	2098830	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2097163_2097251_2097333_2097423_2097496_2097928_2097956_2098051_2098128_2098286_2098335_2098435
transcript_97674.known	chr19	+	1925	6	FSM	ENSG00000099840.14	ENST00000478879.5	1925	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2.33238075793812	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTCTTGTTGGGGCAGGG	NA	False	NA	21	True	ATTAAA	-26	NA	2096858	2099593	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2097163_2097251_2097333_2097423_2097496_2097928_2097956_2098051_2098335_2098435
transcript_97681.known	chr19	-	3387	5	FSM	ENSG00000172081.14	ENST00000357066.8	3387	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	8.25757228245687	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATGGTGTCGTTTTCCTG	-2095581	True	NA	-13	True	AATAAA	-23	NA	2096326	2071035	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2073425_2076810_2077014_2078139_2078680_2085174_2085329_2096225
transcript_97688.nic	chr19	-	5065	32	NIC	ENSG00000065000.19	novel	5065	32	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	3	250	junction_9	49.3187091035226	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCCACATGGGTCTTCT	-2133672	True	NA	-15	True	AATAAA	-14	NA	2151610	2100995	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_2102269_2108686_2108767_2109085_2109208_2109872_2109959_2110135_2110225_2110706_2110897_2111284_2111333_2111678_2111829_2112859_2112932_2113335_2113414_2114124_2114303_2114747_2114822_2115218_2115419_2115537_2115614_2116206_2116279_2116604_2116747_2117221_2117368_2118600_2118833_2120861_2121093_2121162_2121312_2121733_2121880_2123357_2123407_2123829_2123880_2127151_2127202_2129089_2129164_2129317_2129458_2130407_2130538_2132470_2132579_2137010_2137092_2137726_2137808_2138618_2138715_2151238
transcript_97689.known	chr19	-	5065	32	FSM	ENSG00000065000.19	ENST00000643116.3	5065	32	0	0	0	0	multi-exon	TRUE	canonical	3	94	junction_9	62.8009590520431	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGGTCTTCTGCCTGGCC	-2133628	True	NA	-7	True	AATAAA	-22	NA	2151566	2100987	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2102269_2108686_2108767_2109085_2109208_2109872_2109959_2110135_2110225_2110706_2110897_2111284_2111333_2111678_2111829_2112859_2112968_2113335_2113414_2114124_2114303_2114747_2114822_2115218_2115419_2115537_2115614_2116206_2116279_2116604_2116747_2117221_2117368_2118600_2118833_2120861_2121093_2121162_2121312_2121733_2121880_2123357_2123407_2123829_2123880_2127151_2127202_2129089_2129164_2129317_2129458_2130407_2130538_2132470_2132579_2137010_2137092_2137726_2137808_2138618_2138715_2151238
transcript_97700.known	chr19	+	7652	28	FSM	ENSG00000104885.19	ENST00000398665.8	7652	28	0	0	0	0	multi-exon	TRUE	canonical	2	13	junction_1	20.1540024174622	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGTGAATGGCAGCCT	2158627	True	NA	20	True	AATAAA	-20	NA	2163932	2232578	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2164266_2180712_2180757_2185854_2185930_2189731_2189796_2191011_2191241_2193688_2193784_2194514_2194578_2199883_2199940_2202699_2202780_2206728_2206798_2207573_2207681_2208934_2208977_2210399_2210511_2210620_2210856_2211098_2211213_2211750_2211843_2213538_2213641_2213848_2213987_2214470_2214597_2216280_2216766_2216954_2217091_2217771_2217919_2220107_2220223_2221975_2222560_2223280_2223487_2225387_2225453_2226182_2227128_2229784
transcript_9771.nic	chr1	-	1257	8	ISM	ENSG00000162601.11	ENST00000659812.1	3533	20	-137	22903	-59	-5099	5prime_fragment	FALSE	canonical	3	146	junction_3	36.9997242129821	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCAATTCCTGAGTTTTT	-58700018	False	NA	NA	False	AATAGA	-35	NA	58700136	58681870	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_58682546_58685152_58685252_58689037_58689117_58690225_58690250_58690339_58690418_58692860_58692932_58695128_58695208_58699984
transcript_9772.nic	chr1	-	1130	8	ISM	ENSG00000162601.11	ENST00000659812.1	3533	20	-137	23030	-59	-5226	5prime_fragment	FALSE	canonical	3	146	junction_3	36.9997242129821	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGAATGATAATGAAATGC	-58700018	False	NA	NA	False	NA	NA	NA	58700136	58681997	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_58682546_58685152_58685252_58689037_58689117_58690225_58690250_58690339_58690418_58692860_58692932_58695128_58695208_58699984
transcript_97722.nic	chr19	-	2949	22	ISM	ENSG00000065000.19	ENST00000643116.3	5065	32	-167	13188	-167	1171	5prime_fragment	FALSE	canonical	3	262	junction_11	35.4972452701433	1485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CACAAAGAGAAAGAGAGAGA	NA	False	NA	-33	True	AAGAAA	-22	NA	2151733	2114175	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_2114303_2114747_2114822_2115218_2115419_2115537_2115614_2116206_2116279_2116604_2116747_2117221_2117368_2118600_2118833_2120861_2121093_2121162_2121312_2121733_2121880_2123357_2123407_2123829_2123880_2127151_2127202_2129089_2129164_2129317_2129458_2130407_2130538_2132470_2132579_2137010_2137092_2137726_2137808_2138618_2138715_2151238
transcript_9777.nic	chr1	-	402	6	ISM	ENSG00000162601.11	ENST00000659812.1	3533	20	-77	30091	1	1129	5prime_fragment	FALSE	canonical	3	146	junction_1	40.1626692340039	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGTTTGAACAAGGGCT	-58689717	True	NA	NA	False	AGTAAA	-20	NA	58700076	58689058	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_58689117_58690225_58690250_58690339_58690418_58692860_58692932_58695128_58695208_58699984
transcript_97772.known	chr19	+	1619	9	FSM	ENSG00000104897.10	ENST00000221494.10	1619	9	0	0	0	0	multi-exon	FALSE	canonical	3	753	junction_1	52.9172408105336	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGAGTGCACTGATGTC	2219484	True	NA	21	True	ATTAAA	-13	NA	2236823	2248655	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2236902_2243381_2243545_2244543_2244616_2244732_2244780_2245445_2245556_2246752_2246803_2246881_2247023_2247593_2247663_2247766
transcript_97774.known	chr19	+	885	8	FSM	ENSG00000104897.10	ENST00000592314.5	885	8	0	0	0	0	multi-exon	FALSE	canonical	3	753	junction_1	49.5897454837475	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGCCACCGCTGCCTGAG	2219520	True	NA	NA	False	NA	NA	NA	2236859	2247878	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2236902_2243381_2243545_2244543_2244616_2244732_2244780_2245445_2245556_2246752_2247023_2247593_2247663_2247766
transcript_9778.known	chr1	-	378	5	FSM	ENSG00000162601.11	ENST00000483003.5	378	5	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_1	24.2538656712698	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGTTAAAAATTATGGAAT	-58689713	True	NA	NA	False	TATAAA	-11	NA	58700072	58690187	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_58690250_58690339_58690418_58692860_58692932_58695128_58695208_58699984
transcript_97785.known	chr19	-	937	6	FSM	ENSG00000104886.12	ENST00000587394.6	937	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	668.550970382962	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTATATTTCTCAATAA	-2216430	True	NA	NA	False	NA	NA	NA	2236272	2230083	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2230613_2233997_2234062_2234149_2234241_2235761_2235829_2235922_2235991_2236154
transcript_97787.nnic	chr19	-	1595	6	NNC	ENSG00000104886.12	novel	1218	6	NA	NA	-98	0	intron_retention	FALSE	canonical	2	219	junction_5	594.887081722237	258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGATGGCGGTGAAGTGAA	-2236736	True	NA	-5	True	AATAAA	-18	NA	2236763	2233152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_2233906_2233997_2234062_2234149_2234241_2235761_2235829_2235922_2235934_2236154
transcript_97788.known	chr19	-	1218	6	FSM	ENSG00000104886.12	ENST00000326631.7	1218	6	0	0	0	0	multi-exon	FALSE	canonical	3	1542	junction_5	78.1050574546873	1264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGATGGCGGTGAAGTGAA	-2216487	True	NA	-5	True	AATAAA	-18	NA	2236329	2233152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2233906_2233997_2234062_2234149_2234241_2235761_2235829_2235922_2235991_2236154
transcript_97789.known	chr19	-	1329	6	FSM	ENSG00000104886.12	ENST00000589791.5	1329	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	682.270503539469	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGATGGCGGTGAAGTG	-2236622	True	NA	-7	True	AATAAA	-16	NA	2236665	2233154	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2233906_2233997_2234062_2234149_2234241_2235761_2235829_2235922_2235991_2236377
transcript_9779.nic	chr1	-	353	4	ISM	ENSG00000162601.11	ENST00000483003.5	378	5	-64	179	-59	-179	5prime_fragment	FALSE	canonical	3	218	junction_2	17.7451088722749	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGATGATAAAAAATACA	-58700018	False	NA	NA	False	AAAAAG	-17	NA	58700136	58690366	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_58690418_58692860_58692932_58695128_58695208_58699984
transcript_97802.known	chr19	-	1092	5	FSM	ENSG00000104886.12	ENST00000591099.6	1092	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	698.494273419618	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGATGGCGGTGAAGTGAA	-2216452	True	NA	-5	True	AATAAA	-18	NA	2236294	2233152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2233906_2233997_2234062_2235761_2235829_2235922_2235991_2236154
transcript_97805.known	chr19	-	1311	5	FSM	ENSG00000104886.12	ENST00000587962.6	1311	5	0	0	0	0	multi-exon	FALSE	canonical	3	1542	junction_4	87.0660668687865	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCGGTGAAGTGAAGGAG	-2216484	True	NA	-1	True	AATAAA	-22	NA	2236326	2233148	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2234062_2234149_2234241_2235761_2235829_2235922_2235991_2236154
transcript_9781.known	chr1	-	698	3	FSM	ENSG00000162601.11	ENST00000489282.1	698	3	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	21.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATGTTTTCCCTACATT	-58689718	True	NA	NA	False	AATAAA	-26	NA	58700077	58692405	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_58692932_58695128_58695208_58699984
transcript_97810.known	chr19	-	935	4	FSM	ENSG00000104886.12	ENST00000586608.3	935	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	742.778716861369	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCACAGGTGCCCTGCC	-2216456	True	NA	NA	False	NA	NA	NA	2236298	2233407	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2233906_2233997_2234062_2235761_2235991_2236154
transcript_97819.known	chr19	-	2858	3	FSM	ENSG00000104886.12	ENST00000588450.1	2858	3	0	0	0	0	multi-exon	FALSE	canonical	3	1542	junction_2	115.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGATGGCGGTGAAGTGA	-2216421	True	NA	-6	True	AATAAA	-17	NA	2236263	2233153	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2234062_2234149_2235991_2236154
transcript_97820.known	chr19	+	759	4	FSM	ENSG00000104897.10	ENST00000589118.5	759	4	0	0	0	0	multi-exon	FALSE	canonical	3	753	junction_1	64.8553947040816	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAGAGC	2219492	True	NA	NA	False	NA	NA	NA	2236831	2245186	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2236902_2243381_2243545_2244543_2244616_2244732
transcript_97829.known	chr19	+	3691	15	FSM	ENSG00000005206.17	ENST00000613503.5	3691	15	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_3	39.0850067813994	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCAGTGTTGCTGAGGC	2324608	True	NA	NA	False	ATTAAA	-13	NA	2328683	2355095	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2328776_2334601_2334722_2337442_2337626_2338751_2338842_2339068_2339209_2339823_2339967_2340075_2340173_2340897_2341015_2343210_2343293_2343964_2344040_2344361_2344425_2344552_2344653_2345252_2345331_2351433_2351595_2352945
transcript_9783.known	chr1	-	3257	1	FSM	ENSG00000177606.8	ENST00000371222.4	3257	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAGATCTTGAATTGCTT	-58778921	True	NA	-12	True	AATAAA	-17	NA	58784047	58780790	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_58780800_58784000
transcript_97832.known	chr19	+	2583	15	FSM	ENSG00000005206.17	ENST00000610743.4	2583	15	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_14	50.9193039053371	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGCTGGTGCCACCTGG	2324617	True	NA	29	True	AATAAA	-19	NA	2328692	2353933	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2328776_2334601_2334722_2337442_2337626_2338751_2338842_2339068_2339209_2339823_2339967_2340075_2340173_2340897_2341015_2343210_2343293_2343964_2344040_2344361_2344425_2344552_2344653_2345252_2345331_2351433_2351658_2352945
transcript_9786.known	chr1	-	317	3	FSM	ENSG00000235215.2	ENST00000451090.1	317	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTGCTTCACATTGAT	-59078063	False	NA	NA	False	NA	NA	NA	59078116	59055998	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_59056186_59059637_59059683_59078031
transcript_97874.known	chr19	+	2459	8	FSM	ENSG00000005206.17	ENST00000618220.4	2459	8	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_3	27.6095221669212	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCTGGCATTGTGGTGT	2324620	True	NA	NA	False	AATACA	-7	NA	2328695	2342503	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2328776_2334601_2334722_2337442_2337626_2338751_2338842_2339068_2339209_2339823_2339967_2340075_2340173_2340897
transcript_97890.known	chr19	+	969	6	FSM	ENSG00000104904.12	ENST00000582888.8	969	6	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_2	3324.68781090797	2810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCTGGTTTAAGATGAT	2268719	True	NA	31	True	AATAAA	-20	NA	2269533	2273331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2269745_2271390_2271443_2271443_2271531_2271781_2271955_2272734_2272821_2272971
transcript_9791.nic	chr1	+	2080	16	NIC	ENSG00000172456.18	novel	4072	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	13.2939418115504	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAATTAGAGTCTTCATT	NA	False	NA	8	True	AATAAA	-19	NA	59296637	59762724	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_59296908_59321535_59321751_59339957_59340070_59346246_59346399_59378748_59378838_59456960_59457077_59512310_59512440_59554123_59554228_59607802_59607911_59625987_59626050_59638227_59638376_59660218_59660294_59667282_59667404_59674038_59674134_59757930_59757993_59762502
transcript_97920.known	chr19	+	1131	4	FSM	ENSG00000104904.12	ENST00000581150.6	1131	4	0	0	0	0	multi-exon	FALSE	canonical	3	6825	junction_3	138.420454493627	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAACGCTCACTCCGAA	2268705	True	NA	-5	True	NA	NA	NA	2269519	2273221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2269745_2271384_2271955_2272734_2272821_2272971
transcript_97922.known	chr19	+	1012	4	FSM	ENSG00000104904.12	ENST00000590943.6	1012	4	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	3225.4334075697	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACCTGGCTCTGTGGTGG	2269494	False	NA	109	True	AATAAA	-15	NA	2269508	2273488	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2269745_2271781_2271955_2272734_2272821_2272971
transcript_97925.known	chr19	-	512	4	FSM	ENSG00000130332.15	ENST00000585409.2	512	4	0	0	0	0	multi-exon	FALSE	canonical	3	673	junction_2	1604.88566570955	2116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTGAGCCCCGAATCT	-2301261	True	NA	-15	True	AATAAA	-15	NA	2328611	2321520	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2321823_2324124_2324193_2328386_2328478_2328560
transcript_9793.known	chr1	+	1873	16	FSM	ENSG00000172456.18	ENST00000303721.12	1873	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	18.054977768533	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAGTCTTCATTTCAAAA	59297075	True	NA	14	True	AATAAA	-25	NA	59297093	59762730	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_59297151_59321535_59321751_59339957_59340070_59346246_59346399_59378748_59378838_59456960_59457077_59512310_59512440_59554123_59554228_59607802_59607911_59625987_59626050_59638227_59638376_59660218_59660294_59667282_59667404_59674038_59674134_59757930_59757993_59762502
transcript_97931.known	chr19	+	857	3	FSM	ENSG00000104904.12	ENST00000592787.2	857	3	0	0	0	0	multi-exon	FALSE	canonical	3	6605	junction_2	269.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGATTCTCCTGCCTCAGCC	2269500	False	NA	NA	False	NA	NA	NA	2269514	2272262	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2269745_2271384_2271531_2271781
transcript_97933.known	chr19	+	1357	3	FSM	ENSG00000104904.12	ENST00000593012.1	1357	3	0	0	0	0	multi-exon	FALSE	canonical	3	7084	junction_2	30	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTATTGCTGGTTTAA	2268734	True	NA	25	True	AATAAA	-14	NA	2269548	2273325	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2269745_2271384_2271955_2272734
transcript_9794.nic	chr1	+	1985	15	NIC	ENSG00000172456.18	novel	4072	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_13	16.8897988775014	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAATTAGAGTCTTCATT	NA	False	NA	8	True	AATAAA	-19	NA	59296637	59762724	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_59296908_59321535_59321751_59339957_59340070_59346246_59346399_59378748_59378838_59456960_59457077_59512310_59512440_59554123_59554228_59607802_59607911_59625987_59626050_59638227_59638376_59660218_59660294_59667282_59667404_59757930_59757993_59762502
transcript_97944.known	chr19	+	726	4	FSM	ENSG00000104904.12	ENST00000592727.3	726	4	0	0	0	0	multi-exon	FALSE	canonical	3	6605	junction_1	195.766868153594	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTTGTGATACTGAAG	2271256	False	NA	-31	True	AATAAA	-42	NA	2271361	2273269	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2271531_2271781_2271955_2272734_2272821_2272971
transcript_97945.known	chr19	-	575	3	FSM	ENSG00000130332.15	ENST00000587502.2	575	3	0	0	0	0	multi-exon	FALSE	canonical	3	3988	junction_2	303	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTGAGCCCCGAATCTT	-2301236	True	NA	-14	True	AATAAA	-16	NA	2328586	2321519	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2321823_2324124_2324197_2328386
transcript_97946.known	chr19	-	621	4	FSM	ENSG00000130332.15	ENST00000585395.6	621	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	2154.15448739304	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTGAGCCCCGAATCT	-2301127	False	NA	-15	True	AATAAA	-15	NA	2328477	2321520	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2321823_2324124_2324193_2325979_2326140_2328386
transcript_97947.known	chr19	-	1138	7	FSM	ENSG00000167476.10	ENST00000300961.10	1138	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4.17997873466148	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGTCACCTGCTCCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	2256417	2252251	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2252797_2252911_2253004_2253619_2253794_2254186_2254302_2254444_2254483_2255205_2255345_2256382
transcript_97950.known	chr19	-	631	3	FSM	ENSG00000099800.8	ENST00000591871.1	631	3	0	0	0	0	multi-exon	FALSE	canonical	2	106	junction_2	2217	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAACCTCTTTATTTCCC	-2427473	False	NA	-18	True	AATAAA	-16	NA	2427538	2426564	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2427047_2427255_2427325_2427458
transcript_97953.known	chr19	-	1664	3	FSM	ENSG00000099800.8	ENST00000215570.8	1664	3	0	0	0	0	multi-exon	FALSE	canonical	3	4540	junction_1	56.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTGCTTGATCCGCTGG	-2364412	True	NA	-2	True	AATAAA	-38	NA	2427586	2425624	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2427047_2427255_2427325_2427413
transcript_97956.nnic	chr19	-	4426	13	NNC	ENSG00000176619.13	novel	4634	12	NA	NA	-33	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	376.810177307119	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTTCTGCCTCTGAGTTT	-2434869	True	NA	-9	True	AATAAA	-12	NA	2456992	2428167	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_2430001_2430239_2430953_2431547_2431659_2431782_2431903_2432415_2432524_2433825_2434106_2434294_2434516_2434787_2434914_2435000_2435172_2438162_2438289_2438374_2438532_2444403_2444541_2456669
transcript_97958.nnic	chr19	-	4451	13	NNC	ENSG00000176619.13	novel	4634	12	NA	NA	-33	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	376.810177307119	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGTTCTGCCTCTGAGTT	-2434869	True	NA	-10	True	AATAAA	-11	NA	2456992	2428168	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_2429489_2429701_2430953_2431547_2431659_2431782_2431903_2432415_2432524_2433825_2434106_2434294_2434516_2434787_2434914_2435000_2435172_2438162_2438289_2438374_2438532_2444403_2444541_2456669
transcript_97960.known	chr19	-	4634	12	FSM	ENSG00000176619.13	ENST00000325327.4	4634	12	0	0	0	0	multi-exon	FALSE	canonical	3	1184	junction_8	84.5139726332157	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTGCCTCTGAGTTTAT	-2434836	True	NA	-7	True	AATAAA	-14	NA	2456959	2428165	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2430953_2431547_2431659_2431782_2431903_2432415_2432524_2433825_2434106_2434294_2434516_2434787_2434914_2435000_2435172_2438162_2438289_2438374_2438532_2444403_2444541_2456669
transcript_97978.known	chr19	+	750	4	FSM	ENSG00000099860.9	ENST00000585359.1	750	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	30.5759527879163	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGAACCCCCTCCCC	2475074	False	NA	NA	False	AATACA	-4	NA	2476145	2477657	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2476403_2476528_2476629_2477028_2477252_2477487
transcript_97979.nic	chr19	+	1400	4	NIC	ENSG00000099860.9	novel	1371	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	31.7104959840674	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGCTTGTATGTTTTCG	2475055	True	NA	24	True	AATAAA	-14	NA	2476126	2478257	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_2476432_2476528_2476631_2477028_2477252_2477487
transcript_9798.nic	chr1	+	1739	15	NIC	ENSG00000172456.18	novel	4072	17	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	15.0219227552702	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAATTAGAGTCTTCATT	59295936	True	NA	8	True	AATAAA	-19	NA	59296763	59762724	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_59296908_59339957_59340070_59346246_59346399_59378748_59378838_59456960_59457077_59512310_59512440_59554123_59554228_59607802_59607911_59625987_59626050_59638227_59638376_59660218_59660294_59667282_59667404_59674038_59674134_59757930_59757993_59762502
transcript_97980.known	chr19	+	765	3	FSM	ENSG00000099860.9	ENST00000587345.1	765	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCCCGGGAGAGGGAGGC	2475076	False	NA	NA	False	NA	NA	NA	2476147	2477436	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2476403_2476528_2476631_2477028
transcript_97983.known	chr19	+	276	3	FSM	ENSG00000099860.9	ENST00000587887.5	276	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	27.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGTGACAACGACATCAAC	2475284	False	NA	NA	False	NA	NA	NA	2476355	2477126	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2476432_2476528_2476631_2477028
transcript_97984.known	chr19	+	2007	2	FSM	ENSG00000099860.9	ENST00000592937.1	2007	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTGTATGTTTTCGGC	2475055	True	NA	26	True	AATAAA	-16	NA	2476126	2478259	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2476403_2476528
transcript_97987.known	chr19	-	4193	5	FSM	ENSG00000176533.13	ENST00000382159.8	4193	5	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_4	17.6776695296637	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCTCTGGGCTGTTC	-2700083	True	NA	-8	True	AATAAA	-20	NA	2702694	2511218	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2515148_2520607_2520726_2555148_2555189_2646223_2646281_2702645
transcript_97993.nnic	chr19	-	1037	4	NNC	ENSG00000141873.11	novel	1367	3	NA	NA	-49	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	140.615314481271	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGGCCATGTCAACC	-2734198	True	NA	-3	True	TTTAAA	-32	NA	2740077	2732523	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_2732957_2733346_2733486_2737047_2737380_2739944
transcript_97995.known	chr19	-	524	3	FSM	ENSG00000141873.11	ENST00000589363.5	524	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	135.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATGGGGGGCGCGCGGGG	-2734138	True	NA	NA	False	NA	NA	NA	2740017	2733287	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2733486_2737047_2737301_2739944
transcript_97996.known	chr19	-	1367	3	FSM	ENSG00000141873.11	ENST00000269740.9	1367	3	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_1	23.5	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGGCCATGTCAACC	-2734138	True	NA	-3	True	TTTAAA	-32	NA	2740017	2732523	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2733486_2737047_2737380_2739944
transcript_97998.known	chr19	-	3378	2	FSM	ENSG00000176490.5	ENST00000323469.5	3378	2	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	0	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGGCGCCCTGTCTCTGT	-2720102	True	NA	-1	True	AATAAA	-26	NA	2721372	2714566	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2717876_2721303
transcript_97999.known	chr19	-	2940	2	FSM	ENSG00000141873.11	ENST00000455372.2	2940	2	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGTGTCCACACGGGCA	-2734149	True	NA	-37	True	AATAAA	-18	NA	2740028	2734523	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2737380_2739944
transcript_98.known	SIRV2	+	523	1	FSM	SIRV2B	SIRV205	523	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	493	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCGTCTACCGCTTCTT	NA	False	NA	NA	False	NA	NA	NA	1108	1631	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV2_+_1100_1600
transcript_98006.known	chr19	-	2393	12	FSM	ENSG00000104969.11	ENST00000679138.1	2393	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	243.726001149577	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATAGGCGTTGTGACCTC	-2769260	True	NA	-24	True	NA	NA	NA	2783327	2754734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2755934_2757336_2757458_2757564_2757783_2759256_2759295_2761459_2761523_2762505_2762645_2763652_2763758_2765185_2765286_2767135_2767221_2767579_2767687_2768968_2769092_2783232
transcript_98009.known	chr19	-	2854	12	FSM	ENSG00000104969.11	ENST00000676943.1	2854	12	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_11	221.574941149613	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGACCTCTGTCTGTCTTCG	-2769174	True	NA	-12	True	AATAAA	-9	NA	2783241	2754722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2755934_2757336_2757458_2757692_2757783_2759256_2759295_2761459_2761523_2762505_2762645_2763652_2763758_2765185_2765286_2767135_2767221_2767579_2767687_2768968_2769092_2782569
transcript_98011.known	chr19	-	2255	12	FSM	ENSG00000104969.11	ENST00000678595.1	2255	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	242.878978808598	2255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATAGGCGTTGTGACCTC	-2769260	True	NA	-24	True	NA	NA	NA	2783327	2754734	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2755934_2757336_2757448_2757692_2757783_2759256_2759295_2761459_2761523_2762505_2762645_2763652_2763758_2765185_2765286_2767135_2767221_2767579_2767687_2768968_2769092_2783232
transcript_98016.known	chr19	-	2589	11	FSM	ENSG00000104969.11	ENST00000677513.1	2589	11	0	0	0	0	multi-exon	FALSE	canonical	3	732	junction_10	47.6147036113846	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGACCTCTGTCTGTCTTCG	-2769213	True	NA	-12	True	AATAAA	-9	NA	2783280	2754722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2755934_2757336_2757458_2757692_2757783_2759256_2759295_2761459_2761523_2762505_2762645_2763652_2763758_2765185_2765286_2767135_2767687_2768968_2769092_2783232
transcript_98018.known	chr19	-	3744	11	FSM	ENSG00000104969.11	ENST00000677731.1	3744	11	0	0	0	0	multi-exon	FALSE	canonical	3	732	junction_10	48.3946278010277	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCGTTGTGACCTCTGTCT	-2769260	True	NA	-19	True	AATAAA	-2	NA	2783327	2754729	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2755934_2757336_2757458_2757692_2759295_2761459_2761523_2762505_2762645_2763652_2763758_2765185_2765286_2767135_2767221_2767579_2767687_2768968_2769092_2783232
transcript_98055.nic	chr19	+	2623	13	NIC	ENSG00000172009.15	novel	4761	13	NA	NA	-98	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	164.248203101959	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGGCTCCCTGGCCTGGT	NA	False	NA	23	True	ATTAAA	-17	NA	2785404	2813599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_2785679_2790420_2790634_2794763_2794913_2796080_2796189_2799688_2799792_2805015_2805177_2806916_2807053_2807441_2807781_2808242_2808445_2810303_2810491_2810639_2810769_2811597_2811735_2813114
transcript_98063.known	chr19	+	4761	13	FSM	ENSG00000172009.15	ENST00000307741.11	4761	13	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_8	49.9407287580877	1457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGGAACCTGTATGTT	2775888	True	NA	NA	False	AATAAA	-18	NA	2785502	2815807	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2785679_2790420_2790634_2794763_2794913_2796080_2796189_2799688_2799792_2805015_2805177_2806916_2807053_2807441_2807809_2808242_2808445_2810303_2810491_2810639_2810769_2811597_2811735_2813114
transcript_98065.nic	chr19	+	2557	13	NIC	ENSG00000172009.15	novel	4761	13	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_11	157.249801271735	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGGCTCCCTGGCCTGGT	2785409	False	NA	23	True	ATTAAA	-17	NA	2785462	2813599	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_2785679_2790420_2790634_2794763_2794913_2796080_2796189_2799688_2799792_2805015_2805177_2806916_2807053_2807441_2807809_2808242_2808445_2810303_2810491_2810639_2810769_2811633_2811735_2813114
transcript_9811.known	chr1	+	5713	22	FSM	ENSG00000134709.13	ENST00000371208.5	5713	22	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_17	26.0372139050342	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAATAGTTGTGAAATGAT	59811432	True	NA	10	True	AATAAA	-18	NA	59814948	59876322	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_59815181_59821857_59821944_59828779_59828853_59832162_59832214_59833404_59833538_59835344_59835413_59836872_59836936_59840307_59840392_59843431_59843599_59847044_59847186_59848314_59848517_59849072_59849184_59858427_59858516_59858984_59859046_59860187_59860329_59862783_59862878_59864631_59864667_59865162_59865246_59865871_59865973_59868249_59868352_59871041_59871111_59872794
transcript_98121.known	chr19	+	1148	6	FSM	ENSG00000172006.12	ENST00000591265.1	1148	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	24.0615876450412	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGTATGGCCCTGACTATC	2819428	True	NA	NA	False	NA	NA	NA	2819949	2834154	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2820125_2823039_2823113_2827616_2827744_2832302_2832495_2833162_2833270_2833680
transcript_98123.known	chr19	+	3704	5	FSM	ENSG00000172006.12	ENST00000317243.10	3704	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	5.11737237261468	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGATAGACTGTGGGTAC	2819346	True	NA	NA	False	NA	NA	NA	2819867	2836735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2820125_2823039_2823113_2827616_2827744_2832302_2832495_2833680
transcript_98126.nnic	chr19	+	1425	3	NNC	ENSG00000172006.12	novel	3704	5	NA	NA	-8	-9557	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	20	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCCGTTGATAAAACACAC	2819844	False	NA	NA	False	GATAAA	-34	NA	2819859	2824597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_2820125_2823039_2823113_2823510
transcript_98127.known	chr19	+	8504	4	FSM	ENSG00000186300.12	ENST00000334241.9	8504	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	11.8415464455544	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTTAAAAAAAAAAGCTTCAC	2840543	True	NA	NA	False	ATTAAA	-16	NA	2841474	2860471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2841576_2850586_2850714_2851467_2851652_2852379
transcript_98128.known	chr19	+	1970	4	FSM	ENSG00000171970.14	ENST00000306908.10	1970	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	6.12825877028341	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTCTCTAAGTCCTCTTT	2899465	True	NA	NA	False	AATAAA	-17	NA	2900927	2918473	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2901049_2915521_2915649_2916077_2916250_2916923
transcript_98129.known	chr19	-	2040	4	FSM	ENSG00000175691.9	ENST00000314531.5	2040	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	7.40870359029762	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGTATATTTTGTAATT	-2944755	False	NA	0	True	AATAAA	-23	NA	2944971	2933217	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2934816_2936523_2936705_2939280_2939408_2944837
transcript_98130.known	chr19	+	1977	17	FSM	ENSG00000104953.20	ENST00000246112.9	1977	17	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_1	3.94443833137241	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTGGACGCGTCCTGTC	2977403	True	NA	4	True	AATAAA	-17	NA	2977563	2995179	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_2977611_2978197_2978285_2980099_2980183_2981537_2981584_2982147_2982190_2986828_2986892_2986982_2987239_2987355_2987373_2987723_2987791_2987897_2987975_2988090_2988129_2989060_2989314_2989534_2989786_2991842_2991985_2993431_2993583_2994018_2994096_2994899
transcript_98136.known	chr19	-	2812	20	FSM	ENSG00000065717.15	ENST00000262953.11	2812	20	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_14	23.6426536000525	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCACTTCTCTCTCGGGC	-3028832	True	NA	-12	True	AATAAA	-15	NA	3029280	2997643	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2997956_3000646_3000724_3002352_3002504_3005436_3005585_3005720_3005969_3006419_3006670_3008868_3008946_3009541_3009703_3011021_3011161_3013668_3013819_3014569_3014615_3015652_3015761_3017839_3017860_3019282_3019464_3019698_3019774_3025019_3025083_3027828_3027874_3028318_3028383_3028705_3028804_3028880
transcript_98137.known	chr19	-	2344	20	FSM	ENSG00000065717.15	ENST00000590536.5	2344	20	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_14	22.265086391527	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATGACCCCCCTTCCTGT	-3029002	False	NA	NA	False	NA	NA	NA	3029013	2997847	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_2997956_3000646_3000724_3002352_3002504_3005436_3005585_3005720_3005969_3006419_3006670_3008868_3008946_3009541_3009703_3011021_3011161_3013668_3013819_3014569_3014615_3015652_3015761_3017839_3017860_3019282_3019467_3019698_3019774_3025019_3025083_3027828_3027874_3028318_3028383_3028705_3028804_3028880
transcript_9814.nic	chr1	+	1359	11	ISM	ENSG00000134709.13	ENST00000686716.1	3756	15	-167	13975	62	13124	5prime_fragment	FALSE	canonical	3	188	junction_4	21.55945268322	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAATGCAGCACGTACACA	59814832	False	NA	32	True	ATTAAA	-5	NA	59814847	59848474	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_59815181_59821857_59821944_59828779_59828853_59832162_59832214_59833404_59833538_59835344_59835413_59836872_59836936_59840307_59840392_59843431_59843599_59847044_59847186_59848314
transcript_98142.nic	chr19	-	2394	18	ISM	ENSG00000065717.15	ENST00000262953.11	2812	20	818	0	-106	0	3prime_fragment	FALSE	canonical	3	17	junction_14	23.0843196379878	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCACTTCTCTCTCGGGC	-3028451	False	NA	-12	True	AATAAA	-15	NA	3028462	2997643	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_2997956_3000646_3000724_3002352_3002504_3005436_3005585_3005720_3005969_3006419_3006670_3008868_3008946_3009541_3009703_3011021_3011161_3013668_3013819_3014569_3014615_3015652_3015761_3017839_3017860_3019282_3019464_3019698_3019774_3025019_3025083_3027828_3027874_3028318
transcript_98153.nic	chr19	-	2320	17	NIC	ENSG00000065717.15	novel	2812	20	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_16	28.0523366896592	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCACTTCTCTCTCGGGC	-3025658	False	NA	-12	True	AATAAA	-15	NA	3025669	2997643	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_2997956_3000646_3000724_3002352_3002504_3005436_3005585_3005720_3005969_3006419_3006670_3008868_3008946_3009541_3009703_3011021_3011161_3013668_3013819_3014569_3014615_3015652_3015761_3017839_3017860_3019282_3019464_3019698_3019774_3025019_3025083_3025554
transcript_9816.known	chr1	+	1989	12	FSM	ENSG00000162599.17	ENST00000371189.8	1989	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	9.63379039399197	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGAAATGGTTGGGCTT	61081766	False	NA	NA	False	TTTAAA	-34	NA	61081861	61455562	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_61082048_61082760_61082819_61088148_61088681_61277519_61277586_61332511_61332587_61352449_61352568_61359146_61359275_61383236_61383366_61404103_61404283_61406561_61406728_61426464_61426557_61455302
transcript_98182.known	chr19	-	1798	7	FSM	ENSG00000104964.15	ENST00000327141.9	1798	7	0	0	0	0	multi-exon	FALSE	canonical	3	2075	junction_2	205.538858180691	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTGTGTCCCTGCCTCT	-3062276	True	NA	-10	True	AATAAA	-16	NA	3062495	3052909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3054041_3054119_3054195_3055663_3055727_3056311_3056357_3057678_3057743_3061159_3061258_3062173
transcript_98184.known	chr19	-	1884	7	FSM	ENSG00000104964.15	ENST00000221561.12	1884	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	893.732249240976	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTGTGTCCCTGCCTCT	-3063078	True	NA	-10	True	AATAAA	-16	NA	3063107	3052909	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3054041_3054119_3054195_3055663_3055727_3056311_3056357_3057678_3057743_3061159_3061258_3062699
transcript_9819.known	chr1	+	9229	11	FSM	ENSG00000162599.17	ENST00000403491.8	9229	11	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	5.31507290636732	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAGCTGTGTCATCATTT	61082534	False	NA	13	True	AATAAA	-16	NA	61082560	61462788	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_61082819_61088148_61088681_61277519_61277586_61332511_61332587_61352449_61352568_61359146_61359275_61383236_61383366_61404103_61404283_61406561_61406728_61426464_61426557_61455302
transcript_98192.known	chr19	+	4190	7	FSM	ENSG00000088256.9	ENST00000078429.9	4190	7	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	6.69991708074726	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGCGGCCCCCTTCTGG	3092347	True	NA	13	True	AATAAA	-14	NA	3094361	3123999	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_3094788_3110148_3110334_3113329_3113485_3114943_3115073_3118923_3119054_3119205_3119360_3120988
transcript_98193.nnic	chr19	+	1334	7	NNC	ENSG00000088256.9	novel	733	6	NA	NA	1431	0	intron_retention	FALSE	canonical	0	0	junction_1	20.5216687647201	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	3096067	False	NA	NA	False	NA	NA	NA	3096079	3121454	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_3096195_3110148_3110334_3113329_3113485_3114943_3115073_3118923_3119054_3119205_3119360_3120988
transcript_98204.known	chr19	+	3680	15	FSM	ENSG00000125912.11	ENST00000246117.9	3680	15	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_11	94.3225306908077	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGTTTGGTCTGGGGGC	3179440	True	NA	35	True	AATAAA	-21	NA	3185929	3209575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_3186215_3192469_3192661_3193283_3193429_3196182_3196278_3198816_3198898_3201522_3201627_3203755_3203845_3204004_3204145_3204572_3204752_3205938_3206027_3206151_3206191_3206261_3206426_3207197_3207252_3207390_3207470_3207628
transcript_98207.nic	chr19	+	2028	15	NIC	ENSG00000125912.11	novel	3680	15	NA	NA	-70	0	combination_of_known_junctions	FALSE	canonical	3	333	junction_11	107.799227591796	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGGGGGGGGATTGTTT	3185817	False	NA	27	True	NA	NA	NA	3185859	3207856	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_3186215_3192469_3192661_3193283_3193429_3196182_3196278_3198816_3198898_3201522_3201627_3203755_3203845_3204004_3204145_3204572_3204752_3205938_3206027_3206151_3206191_3206264_3206426_3207197_3207252_3207390_3207470_3207628
transcript_98208.nic	chr19	+	4039	15	NIC	ENSG00000125912.11	novel	3680	15	NA	NA	5	0	intron_retention	TRUE	canonical	3	333	junction_11	107.799227591796	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGTTTGGTCTGGGGGC	3185525	True	NA	35	True	AATAAA	-21	NA	3185567	3209575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_3186215_3192469_3192661_3193283_3193429_3196182_3196278_3198816_3198898_3201522_3201627_3203755_3203845_3204004_3204145_3204572_3204752_3205938_3206027_3206151_3206191_3206264_3206426_3207197_3207252_3207390_3207470_3207628
transcript_9821.known	chr1	+	2683	10	FSM	ENSG00000162599.17	ENST00000371187.7	2683	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	9.03217841462292	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATCTAATGGTGCTTTTA	61082525	True	NA	83	True	ATTAAA	-18	NA	61082620	61456394	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_61082819_61088148_61088681_61277519_61277586_61332511_61332587_61352449_61352568_61359146_61359275_61383236_61383366_61404103_61404283_61406561_61406728_61455302
transcript_98222.known	chr19	+	2735	9	FSM	ENSG00000125912.11	ENST00000592737.5	2735	9	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_5	138.442903393421	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGTTTGGTCTGGGGGC	3203767	True	NA	35	True	AATAAA	-21	NA	3203796	3209575	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_3203845_3204004_3204145_3204572_3204752_3205938_3206027_3206151_3206191_3206264_3206426_3207197_3207252_3207390_3207470_3207628
transcript_98235.known	chr19	+	977	4	FSM	ENSG00000141905.19	ENST00000589537.1	977	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.4142135623731	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCACCTCTCCCCGGGCCC	3434580	True	NA	NA	False	NA	NA	NA	3435045	3463255	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_3435208_3449013_3449140_3452481_3452667_3462751
transcript_98237.known	chr19	-	820	3	FSM	ENSG00000095932.7	ENST00000587847.1	820	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	7	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATGTCTACTGAACAGAA	-3478834	True	NA	-118	True	NA	NA	NA	3479088	3474507	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3474997_3478418_3478479_3478817
transcript_98238.known	chr19	-	1757	5	FSM	ENSG00000129932.10	ENST00000672935.1	1757	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	117.821899492412	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACTCCTCTGAGTGTGTT	-3498325	True	NA	-6	True	ATTAAA	-17	NA	3500637	3490820	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3491812_3492261_3492500_3494027_3494105_3496540_3496887_3500532
transcript_98240.known	chr19	-	1763	5	FSM	ENSG00000129932.10	ENST00000427575.6	1763	5	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_2	19.5639975465138	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGACTCCTCTGAGTGT	-3498362	True	NA	-9	True	ATTAAA	-14	NA	3500674	3490823	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3491812_3492261_3492500_3494027_3494105_3496540_3496887_3500560
transcript_98252.known	chr19	+	5178	14	FSM	ENSG00000105325.15	ENST00000441788.7	5178	14	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_9	20.7147433417838	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGCGTTCAGTACCTTCA	3502935	True	NA	19	True	AATACA	-22	NA	3506310	3538334	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_3506475_3522955_3523059_3525867_3525994_3526119_3526184_3526258_3526387_3526979_3527063_3527630_3527815_3530791_3530858_3531713_3531817_3531910_3532096_3532416_3532651_3533293_3533399_3534420_3534514_3534794
transcript_98281.nic	chr19	-	2337	11	NIC	ENSG00000161091.14	novel	777	7	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_2	66.8523746773441	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAACCCAACAAACATCCA	NA	False	NA	44	True	AATAAA	-21	NA	3557636	3538274	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_3538757_3542775_3542978_3544808_3544940_3546073_3546169_3546254_3546426_3547271_3547365_3547454_3547548_3547847_3548031_3548122_3548268_3550983_3551195_3557105
transcript_9829.known	chr1	-	1250	7	FSM	ENSG00000162604.12	ENST00000294613.9	1250	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	111.157545852722	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTAGTGCTTTGTTATT	NA	False	NA	-5	True	AATAAA	-17	NA	61725423	61681046	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_61681351_61683416_61683547_61694696_61694771_61700933_61701026_61709328_61709438_61723712_61723785_61724954
transcript_98291.known	chr19	+	1585	10	FSM	ENSG00000064961.19	ENST00000333651.11	1585	10	0	0	0	0	multi-exon	FALSE	canonical	3	616	junction_1	132.281685975211	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTGAGTGTGTAAGCTT	3555611	True	NA	22	True	AATAAA	-24	NA	3572943	3579083	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_3572995_3573291_3573348_3573691_3573801_3574382_3574587_3575539_3575661_3576260_3576308_3576552_3576626_3576891_3577108_3577980_3578114_3578508
transcript_98296.nic	chr19	-	2149	10	NIC	ENSG00000161091.14	novel	777	7	NA	NA	-50	0	combination_of_known_junctions	TRUE	canonical	3	73	junction_1	44.6047110394584	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCAGAAACCTCCTGCCC	NA	False	NA	-47	True	AATAAA	-35	NA	3557636	3538260	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_3538757_3544808_3544940_3546073_3546169_3546254_3546426_3547271_3547365_3547454_3547548_3547847_3548031_3548122_3548268_3550983_3551195_3557105
transcript_98304.known	chr19	-	2137	10	FSM	ENSG00000161091.14	ENST00000355415.7	2137	10	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	35.8095097376985	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCTCCTGTCTGCCTG	-3554196	True	NA	-1	True	AATAAA	-13	NA	3557586	3544198	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3544733_3544808_3544940_3546073_3546169_3546254_3546426_3547271_3547365_3547454_3547548_3547847_3548031_3548122_3548268_3550983_3551195_3557105
transcript_98312.nic	chr19	+	2201	9	NIC	ENSG00000064961.19	novel	1585	10	NA	NA	-34	0	intron_retention	FALSE	canonical	3	616	junction_1	138.06067506716	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTGAGTGTGTAAGCTT	3555577	True	NA	22	True	AATAAA	-24	NA	3572909	3579083	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_3572995_3573291_3573348_3573691_3574587_3575539_3575661_3576260_3576308_3576552_3576626_3576891_3577108_3577980_3578114_3578508
transcript_98335.known	chr19	+	2434	8	FSM	ENSG00000064961.19	ENST00000488973.6	2434	8	0	0	0	0	multi-exon	FALSE	canonical	3	893	junction_1	62.4195809152277	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTGTAAGCTTGTTTG	3555646	True	NA	27	True	AATAAA	-29	NA	3572978	3579088	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_3573348_3573691_3574587_3575539_3575661_3576260_3576308_3576552_3576626_3576891_3577108_3577980_3578114_3578508
transcript_98336.known	chr19	+	4410	6	FSM	ENSG00000179855.9	ENST00000644452.3	4410	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	1.85472369909914	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTGTGTCATTTTGGG	3585268	True	NA	9	True	AATAAA	-20	NA	3585477	3593541	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_3585823_3586494_3586681_3586813_3586995_3589442_3589556_3589830_3589913_3590038
transcript_98337.known	chr19	-	2642	3	FSM	ENSG00000006638.13	ENST00000375190.10	2642	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGCGCGATTGTTCATGC	-3606797	True	NA	NA	False	ATTAAA	-17	NA	3606875	3594506	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3595934_3599848_3600718_3606529
transcript_98339.nic	chr19	-	2691	11	NIC	ENSG00000105298.14	novel	2810	12	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	47.4561903232866	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAGGTTTGCAGAAATGC	-3623818	True	NA	-20	True	AATAAA	-19	NA	3626831	3610644	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_3610967_3611899_3612414_3613057_3613366_3613463_3613587_3614396_3614590_3618874_3618990_3619079_3619243_3620126_3620273_3620706_3620803_3623687_3624163_3626595
transcript_98343.nic	chr19	-	3082	11	NIC	ENSG00000105298.14	novel	2810	12	NA	NA	-16	-1	combination_of_known_junctions	TRUE	canonical	3	34	junction_1	38.1818019480485	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCTTAGGTTTGCAGAAA	-3623818	True	NA	-23	True	AATAAA	-16	NA	3626831	3610647	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_3611361_3611899_3612414_3613057_3613366_3613463_3613587_3614396_3614590_3618874_3618990_3619079_3619243_3620126_3620273_3620706_3620803_3623687_3624163_3626595
transcript_98347.known	chr19	-	3583	10	FSM	ENSG00000105298.14	ENST00000429344.7	3583	10	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_7	18.6534344634963	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAGGTTTGCAGAAATGC	-3623777	True	NA	-20	True	AATAAA	-19	NA	3626790	3610644	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3612414_3613057_3613366_3613463_3613587_3614396_3614590_3618874_3618990_3619079_3619243_3620126_3620273_3620706_3620803_3623687_3624163_3626595
transcript_98350.nic	chr19	-	4058	9	NIC	ENSG00000105298.14	novel	3583	10	NA	NA	-16	0	intron_retention	FALSE	canonical	3	133	junction_6	18.0208212909401	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAGGTTTGCAGAAATGC	-3623818	True	NA	-20	True	AATAAA	-19	NA	3626831	3610644	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_3612414_3613057_3613366_3613463_3613587_3614396_3614590_3618874_3618990_3619079_3619243_3620126_3620803_3623687_3624163_3626595
transcript_98358.known	chr19	-	2671	11	FSM	ENSG00000105298.14	ENST00000248420.9	2671	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	47.4561903232866	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATCTTAGGTTTGCAGA	-3623802	True	NA	-25	True	AATAAA	-14	NA	3626815	3610649	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3610972_3611903_3612414_3613057_3613366_3613463_3613587_3614396_3614590_3618874_3618990_3619079_3619243_3620126_3620273_3620706_3620803_3623687_3624163_3626595
transcript_98360.known	chr19	-	5069	19	FSM	ENSG00000186111.11	ENST00000679885.1	5069	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	55.9640812938239	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGCCTGTTTGCCTTTCTG	-3696381	False	NA	32	True	AATAAA	-15	NA	3700390	3630182	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3633170_3633436_3633521_3637535_3637614_3638883_3639017_3641704_3641810_3642906_3642940_3643242_3643382_3644086_3644252_3645973_3646059_3647337_3647387_3648624_3648709_3651825_3652032_3653289_3653590_3656404_3656558_3660965_3661084_3661870_3662002_3664821_3664915_3667321_3667354_3700296
transcript_98362.known	chr19	-	5069	18	FSM	ENSG00000186111.11	ENST00000335312.8	5069	18	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	32.7200561754495	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGCCTGTTTGCCTTTCTG	-3696459	True	NA	32	True	AATAAA	-15	NA	3700468	3630182	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3633170_3633436_3633521_3638883_3639017_3641704_3641810_3642906_3642940_3643242_3643382_3644086_3644252_3645973_3646059_3647337_3647387_3648624_3648709_3651825_3652032_3653289_3653590_3656404_3656558_3660965_3661084_3661870_3662002_3664821_3664915_3667321_3667354_3700296
transcript_98369.known	chr19	-	2289	17	FSM	ENSG00000186111.11	ENST00000539785.5	2289	17	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	26.3503291013604	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGGAAAAGAACAAAAAAGAC	-3696456	True	NA	NA	False	NA	NA	NA	3700465	3632875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3633170_3638883_3639017_3641704_3641810_3642906_3642940_3643242_3643382_3644086_3644252_3645973_3646059_3647337_3647387_3648624_3648709_3651825_3652032_3653289_3653590_3656404_3656558_3660965_3661084_3661870_3662002_3664821_3664915_3667321_3667354_3700296
transcript_9838.known	chr1	-	1056	5	FSM	ENSG00000162604.12	ENST00000371178.5	1056	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	132.395949711462	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAAAAAAAGGGC	-61721181	True	NA	NA	False	NA	NA	NA	61725120	61694153	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_61694771_61700933_61701026_61709328_61709438_61723712_61723787_61724956
transcript_98381.known	chr19	+	3076	21	FSM	ENSG00000105289.15	ENST00000541714.7	3076	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	32.0523010094439	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCTTCTAGTGGCTTCCA	NA	False	NA	15	True	AATAAA	-19	NA	3708383	3750813	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_3708562_3728423_3728481_3728603_3728714_3730027_3730131_3730354_3730707_3731934_3732039_3733752_3733913_3734326_3734436_3735565_3735640_3735868_3735936_3736164_3736322_3738554_3738664_3738896_3739135_3740551_3740764_3743938_3744035_3746010_3746082_3746484_3746696_3746775_3746877_3747793_3748082_3750137_3750185_3750581
transcript_98384.known	chr19	+	3068	21	FSM	ENSG00000105289.15	ENST00000589378.5	3068	21	0	0	0	0	multi-exon	FALSE	canonical	2	77	junction_1	17.43925170413	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACCGGCTTCTAGTGGCT	3719350	True	NA	11	True	AATAAA	-15	NA	3721736	3750809	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_3721911_3728423_3728481_3728603_3728714_3730027_3730131_3730354_3730707_3731934_3732039_3733752_3733913_3734326_3734436_3735565_3735640_3735868_3735936_3736164_3736322_3738554_3738664_3738896_3739135_3740551_3740764_3743938_3744035_3746010_3746082_3746484_3746696_3746775_3746877_3747793_3748082_3750137_3750185_3750581
transcript_9839.known	chr1	-	427	1	FSM	ENSG00000271200.1	ENST00000605725.1	427	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGAGTCATTATTTTCT	-61742412	False	NA	0	True	AATAAA	-20	NA	61742424	61741997	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_61742000_61742400
transcript_98398.known	chr19	-	2176	11	FSM	ENSG00000011132.12	ENST00000316757.4	2176	11	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_8	15.0229823936527	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAAGGTTGTGGGTTCTGT	-3759527	True	NA	97	True	ATTAAA	-16	NA	3761692	3750771	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3751098_3751188_3751330_3751433_3751554_3752507_3752721_3752819_3752991_3753764_3753927_3754018_3754106_3754194_3754341_3759560_3759601_3759688_3760302_3761535
transcript_98402.nic	chr19	-	2167	10	NIC	ENSG00000011132.12	novel	2176	11	NA	NA	-10	0	intron_retention	FALSE	canonical	3	86	junction_8	15.6898960960923	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCTCGGATCAGGGTCT	NA	False	NA	-10	True	AGTAAA	-17	NA	3761702	3750878	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_3751098_3751188_3751330_3751433_3751554_3752507_3752721_3752819_3752991_3753764_3753927_3754018_3754106_3754194_3754341_3759560_3760302_3761535
transcript_98426.known	chr19	+	608	3	FSM	ENSG00000183617.5	ENST00000330133.5	608	3	0	0	0	0	multi-exon	FALSE	canonical	3	405	junction_2	52	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCCCTTGGTATTGTCTG	3758873	True	NA	22	True	AATAAA	-22	NA	3762681	3767565	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_3762819_3765165_3765332_3767260
transcript_98431.known	chr19	-	1994	14	FSM	ENSG00000007264.15	ENST00000585778.5	1994	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	61.901238385104	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTAGGCGCCTGTGTGTC	-3784385	True	NA	-6	True	GATAAA	-15	NA	3786282	3777974	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3778423_3778508_3778593_3778991_3779188_3779377_3779452_3779532_3779618_3779697_3779798_3781606_3781673_3783125_3783220_3783813_3784034_3784123_3784240_3784337_3784452_3784824_3784885_3785063_3785287_3786168
transcript_98432.nic	chr19	-	2229	14	NIC	ENSG00000007264.15	novel	2098	14	NA	NA	-21	0	combination_of_known_junctions	TRUE	canonical	2	9	junction_8	58.1554741326871	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTAGGCGCCTGTGTGTCTC	NA	False	NA	-4	True	GATAAA	-17	NA	3786434	3777972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_3778423_3778508_3778596_3778991_3779188_3779377_3779452_3779532_3779618_3779697_3779798_3781606_3781673_3783125_3783298_3783813_3784034_3784123_3784240_3784337_3784452_3784824_3784885_3785063_3785287_3786168
transcript_98440.known	chr19	-	1907	13	FSM	ENSG00000007264.15	ENST00000395040.6	1907	13	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_12	53.6207748918271	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTAGGCGCCTGTGTGTCTC	-3784516	True	NA	-4	True	GATAAA	-17	NA	3786413	3777972	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3778423_3778508_3778596_3778991_3779188_3779377_3779452_3779532_3779618_3779697_3779798_3781606_3781673_3783125_3783220_3783813_3784034_3784123_3784240_3784337_3784452_3784824_3784885_3786168
transcript_9845.known	chr1	+	4863	36	FSM	ENSG00000132849.22	ENST00000635214.1	4863	36	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_34	23.2126636795961	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACGTGCTGTGGGAGTTGG	61739043	True	NA	NA	False	AAGAAA	-43	NA	61742476	62114250	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_61742556_61762857_61762915_61763012_61763180_61766278_61766474_61769282_61769423_61771430_61771627_61775205_61775335_61787753_61787973_61791347_61791448_61795466_61795559_61797286_61797429_61801622_61801770_61805447_61805525_61808473_61808531_61822944_61823080_61827421_61827584_61833653_61833786_61856029_61856240_61861550_61861668_61864237_61864634_61875242_61875367_61884236_61884409_61899582_61899655_61901281_61901460_61908371_61908483_61914586_61914665_61927729_61927830_61990167_61990365_62017855_62017948_62037976_62038050_62050965_62051059_62079449_62079568_62084514_62084649_62100318_62100409_62108436_62108521_62114052
transcript_98471.known	chr19	-	4766	19	FSM	ENSG00000105278.12	ENST00000262961.9	4766	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.68508343201146	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGAGCCGTGCCGT	-3866825	True	NA	-5	True	AATAAA	-15	NA	3869038	3804023	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3806126_3807171_3807270_3808871_3808984_3810749_3810846_3811271_3811367_3813819_3813959_3816673_3816846_3819044_3819236_3820181_3820291_3821339_3821480_3822080_3822201_3823245_3823404_3825229_3825408_3827470_3827654_3831302_3831557_3831659_3831879_3833663_3833779_3834772_3834984_3868964
transcript_9848.known	chr1	+	5448	35	FSM	ENSG00000132849.22	ENST00000484562.5	5448	35	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_10	11.6829882535622	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGGAAAAAAGAAAGATG	61739043	True	NA	NA	False	ATTAAA	-13	NA	61742476	62114925	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_61742556_61762857_61762915_61763012_61763180_61766278_61766474_61769282_61769423_61771430_61771627_61775205_61775335_61787753_61787973_61791347_61791448_61795466_61795559_61797286_61797429_61801622_61801770_61805447_61805525_61808473_61808531_61822944_61823080_61827421_61827584_61833653_61833786_61856029_61856240_61861550_61861668_61864237_61864634_61875242_61875367_61884236_61884409_61899582_61899655_61901281_61901460_61908371_61908483_61914586_61914665_61927729_61927830_61990167_61990365_62017855_62017948_62037976_62038050_62050965_62051059_62079449_62079568_62084514_62084649_62108436_62108521_62114052
transcript_98480.known	chr19	-	1019	3	FSM	ENSG00000105278.12	ENST00000586578.1	1019	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	37	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAATTTCATGTAATTTT	-3868980	False	NA	0	True	AATAAA	-25	NA	3869015	3851804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3852615_3855401_3855560_3868964
transcript_98482.nic	chr19	-	1233	3	NIC	ENSG00000105278.12	novel	1019	3	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_2	33	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAATTTCATGTAATTTT	-3869057	False	NA	0	True	AATAAA	-25	NA	3869092	3851804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_3852615_3855401_3855697_3868964
transcript_98483.known	chr19	-	870	2	FSM	ENSG00000105278.12	ENST00000439086.2	870	2	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGAAATGTGAATTTCAT	-3866819	True	NA	-8	True	AATAAA	-17	NA	3869032	3851812	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3852615_3868964
transcript_98486.known	chr19	+	4971	13	FSM	ENSG00000167654.18	ENST00000450849.7	4971	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	8.82664841387841	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGGTTTGTTCCTTTTGA	3879326	True	NA	14	True	AATAAA	-18	NA	3880684	3928082	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_3881009_3885726_3885845_3902486_3902546_3905433_3905656_3907733_3907920_3908267_3908371_3909485_3909618_3910802_3910890_3913757_3913857_3917741_3917778_3918805_3918878_3920765_3920799_3924582
transcript_98491.known	chr19	+	1139	8	FSM	ENSG00000077009.14	ENST00000616156.4	1139	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	213.303750074673	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTTGGTGTCTACCGTG	3933075	False	NA	13	True	AGTAAA	-18	NA	3933102	3942414	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_3933179_3933457_3933698_3936574_3936666_3937224_3937289_3938602_3938760_3939899_3939972_3941070_3941178_3942082
transcript_98492.nnic	chr19	+	1191	8	NNC	ENSG00000077009.14	novel	1160	8	NA	NA	-64	0	intron_retention	FALSE	canonical	3	8	junction_1	176.240443365168	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTGGTGTCTACCGTGTT	3932956	True	NA	15	True	AGTAAA	-20	NA	3933004	3942416	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_3933179_3933490_3933698_3936574_3936666_3937239_3937289_3938602_3938760_3939899_3939972_3941070_3941178_3942082
transcript_98509.known	chr19	-	2286	9	FSM	ENSG00000167657.14	ENST00000545797.7	2286	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_8	95.1254927713912	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGGGTGTTGTGTGCCTCA	-3960459	True	NA	-1	True	AATAAA	-18	NA	3971099	3958452	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3959638_3960058_3960105_3961008_3961162_3963642_3963670_3963870_3963920_3964243_3964374_3964630_3964992_3969673_3969830_3970920
transcript_9851.nic	chr1	+	3855	27	ISM	ENSG00000132849.22	ENST00000635214.1	4863	36	-71	186421	-71	52298	5prime_fragment	FALSE	canonical	3	61	junction_10	12.217760377379	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGCCTTTTCACTATT	61738972	True	NA	32	True	AATGAA	-23	NA	61742405	61927829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_61742556_61762857_61762915_61763012_61763180_61766278_61766474_61769282_61769423_61771430_61771627_61775205_61775335_61787753_61787973_61791347_61791448_61795466_61795559_61797286_61797429_61801622_61801770_61805447_61805525_61808473_61808531_61822944_61823080_61827421_61827584_61833653_61833786_61856029_61856240_61861550_61861668_61864237_61864634_61875242_61875367_61884236_61884409_61899582_61899655_61901281_61901460_61908371_61908483_61914586_61914665_61927729
transcript_98510.nic	chr19	-	2218	9	NIC	ENSG00000167657.14	novel	2286	9	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	258	junction_8	25.1532801041932	1361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATACGCGGGTGTTGTGTG	-3970753	False	NA	-6	True	AATAAA	-13	NA	3971137	3958457	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_3959638_3960058_3960105_3961008_3961162_3963642_3963670_3963870_3963920_3964243_3964374_3964630_3964992_3969673_3969830_3971021
transcript_98529.known	chr19	-	2105	8	FSM	ENSG00000167657.14	ENST00000301264.7	2105	8	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_2	23.0553902679647	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGCGGGTGTTGTGTGCCTC	-3969767	False	10640	-2	True	AATAAA	-17	NA	3969828	3958453	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3959638_3960058_3960105_3961008_3961162_3963642_3963670_3963870_3963920_3964243_3964374_3964630_3964992_3969673
transcript_9853.nic	chr1	+	3735	26	ISM	ENSG00000132849.22	ENST00000635214.1	4863	36	-52	199587	-52	39132	5prime_fragment	FALSE	canonical	3	61	junction_10	12.2659854883332	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAACTTGAACCTCTCAAG	61738991	True	NA	NA	False	AAGAAA	-11	NA	61742424	61914663	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_61742556_61762857_61762915_61763012_61763180_61766278_61766474_61769282_61769423_61771430_61771627_61775205_61775335_61787753_61787973_61791347_61791448_61795466_61795559_61797286_61797429_61801622_61801770_61805447_61805525_61808473_61808531_61822944_61823080_61827421_61827584_61833653_61833786_61856029_61856240_61861550_61861668_61864237_61864634_61875242_61875367_61884236_61884409_61899582_61899655_61901281_61901460_61908371_61908483_61914586
transcript_98546.known	chr19	-	3158	15	FSM	ENSG00000167658.16	ENST00000309311.7	3158	15	0	0	0	0	multi-exon	FALSE	canonical	3	6884	junction_14	759.65372414821	9041	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTCTGCATTTTTCAC	-3874955	True	NA	-15	True	AATAAA	-17	NA	3985463	3976055	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_3976748_3977214_3977348_3977427_3977611_3977818_3978173_3979328_3979437_3979807_3980067_3980513_3980710_3980840_3980980_3981338_3981453_3981946_3982053_3982245_3982425_3982806_3983019_3983109_3983292_3984135_3984351_3985377
transcript_98613.known	chr19	+	3069	11	FSM	ENSG00000105229.7	ENST00000262971.3	3069	11	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_9	9.42814934120159	1069	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGGCGTCCGCTTTTCTG	3998410	True	NA	17	True	AATAAA	-20	NA	4007735	4039386	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_4007788_4012922_4013350_4024035_4024121_4028145_4028188_4028509_4028601_4028719_4028849_4028930_4029037_4033099_4033174_4033419_4033581_4037373_4037505_4037615
transcript_98629.known	chr19	-	2083	3	FSM	ENSG00000178951.9	ENST00000601588.1	2083	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	15.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAACAGAAACCCGAGA	-4065476	False	NA	-33	True	NA	NA	NA	4065732	4047741	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4048245_4053970_4055248_4065429
transcript_98630.known	chr19	-	6437	3	FSM	ENSG00000178951.9	ENST00000322357.9	6437	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	23.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCGCCTCAGTCGCCTC	-4066643	True	NA	-20	True	CATAAA	-39	NA	4066899	4043302	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4048245_4053970_4055248_4066681
transcript_98634.known	chr19	-	1727	11	FSM	ENSG00000126934.15	ENST00000262948.10	1727	11	0	0	0	0	multi-exon	FALSE	canonical	3	877	junction_6	88.1558279412087	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCGCCATCCTGCTTCTTT	-4107455	True	NA	-7	True	AAAAAG	-5	NA	4124122	4090320	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4090709_4094452_4094499_4095387_4095450_4097278_4097344_4099200_4099415_4101018_4101144_4101228_4101281_4102375_4102454_4110508_4110656_4117418_4117630_4123783
transcript_98636.nic	chr19	-	1593	8	NIC	ENSG00000077463.15	novel	1600	8	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	20.2192068719476	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTGTGTTTACTTTAT	-4180951	True	NA	-4	True	AATAAA	-19	NA	4182596	4174108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_4174947_4175027_4175112_4175679_4175761_4175841_4175938_4177078_4177139_4179103_4179287_4180781_4180910_4182473
transcript_98639.known	chr19	-	1600	8	FSM	ENSG00000077463.15	ENST00000337491.7	1600	8	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	10.5482371096998	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTGTGTTTACTTTAT	-4180918	True	NA	-4	True	AATAAA	-19	NA	4182563	4174108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4174947_4175027_4175152_4175679_4175761_4175841_4175938_4177078_4177139_4179103_4179287_4180781_4180910_4182473
transcript_98643.known	chr19	-	1361	7	FSM	ENSG00000077463.15	ENST00000601488.5	1361	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	29.8272805777977	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTGTGTTTACTTTAT	-4180902	True	NA	-4	True	AATAAA	-19	NA	4182547	4174108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4174947_4175027_4175112_4175679_4175761_4175841_4175938_4177078_4177139_4180781_4180910_4182473
transcript_98645.known	chr19	-	1473	7	FSM	ENSG00000077463.15	ENST00000600938.5	1473	7	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_6	24.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAGTGTGTTTACTTTA	-4180920	True	NA	-5	True	AATAAA	-18	NA	4182565	4174109	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4174947_4175027_4175152_4175679_4175761_4175841_4175938_4177078_4177139_4179103_4179287_4182473
transcript_98647.known	chr19	-	827	7	FSM	ENSG00000077463.15	ENST00000597896.5	827	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	25.1925915035882	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCGGTCCCCAGCTGAC	-4180855	True	NA	NA	False	NA	NA	NA	4182500	4174635	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4174947_4175027_4175152_4175679_4175761_4175841_4175938_4177078_4177139_4180781_4180910_4182473
transcript_98648.known	chr19	-	1506	7	FSM	ENSG00000077463.15	ENST00000305232.10	1506	7	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_2	24.1292814278051	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTGTGTTTACTTTAT	-4180905	True	NA	-4	True	AATAAA	-19	NA	4182550	4174108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4174947_4175027_4175152_4175841_4175938_4177078_4177139_4179103_4179287_4180781_4180910_4182473
transcript_98649.nic	chr19	-	2161	7	NIC	ENSG00000077463.15	novel	1600	8	NA	NA	-30	0	intron_retention	FALSE	canonical	3	54	junction_5	6.07590871118606	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTGTGTTTACTTTAT	-4180951	True	NA	-4	True	AATAAA	-19	NA	4182596	4174108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_4174947_4175027_4175761_4175841_4175938_4177078_4177139_4179103_4179287_4180781_4180910_4182473
transcript_98652.known	chr19	-	1372	6	FSM	ENSG00000077463.15	ENST00000599365.5	1372	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	32.0287370965513	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTGTGTTTACTTTAT	-4180899	True	NA	-4	True	AATAAA	-19	NA	4182544	4174108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4174947_4175027_4175152_4175841_4175938_4177078_4177139_4179103_4179287_4182473
transcript_98654.nic	chr19	-	2242	6	NIC	ENSG00000077463.15	novel	1600	8	NA	NA	-30	0	intron_retention	FALSE	canonical	3	54	junction_4	6.43117407632541	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTGTGTTTACTTTAT	-4180951	True	NA	-4	True	AATAAA	-19	NA	4182596	4174108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_4174947_4175027_4175938_4177078_4177139_4179103_4179287_4180781_4180910_4182473
transcript_98657.known	chr19	-	1260	5	FSM	ENSG00000077463.15	ENST00000601069.5	1260	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	29.0721086266545	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTGGAGATCCCCGCCTG	-4180921	True	NA	NA	False	NA	NA	NA	4182566	4174877	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4174947_4175027_4175938_4177078_4177139_4180781_4180910_4182473
transcript_98659.nic	chr19	-	2323	5	NIC	ENSG00000077463.15	novel	1600	8	NA	NA	-30	0	intron_retention	FALSE	canonical	3	54	junction_3	5.95818764390649	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTGTGTTTACTTTAT	-4180951	True	NA	-4	True	AATAAA	-19	NA	4182596	4174108	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_4175938_4177078_4177139_4179103_4179287_4180781_4180910_4182473
transcript_98662.known	chr19	-	371	2	FSM	ENSG00000077463.15	ENST00000594341.1	371	2	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAAGAATTCCAGACCAGC	-4180901	True	NA	NA	False	NA	NA	NA	4182546	4180611	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4180910_4182473
transcript_98665.known	chr19	+	3711	20	FSM	ENSG00000089847.13	ENST00000262970.9	3711	20	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_1	17.7977246514852	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGCCAGGCCCAGTGGC	4198122	False	NA	NA	False	NA	NA	NA	4198139	4224505	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_4198533_4199874_4200006_4200082_4200172_4202025_4202091_4202868_4202927_4207241_4207313_4207500_4207608_4207780_4207969_4208763_4208802_4210057_4210139_4210264_4210373_4212474_4212514_4212599_4212699_4215977_4216051_4216283_4216403_4216549_4218164_4219590_4219759_4222669_4222796_4224126_4224193_4224427
transcript_9867.known	chr1	+	4990	33	FSM	ENSG00000132849.22	ENST00000484937.5	4990	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_25	35.5931875504288	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATTGTTGTGGTGTTTCT	61805497	False	NA	NA	False	ATTAAA	-18	NA	61805509	62163504	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_61805525_61808473_61808531_61822944_61823080_61827421_61827584_61833653_61833786_61856029_61856240_61861550_61861668_61864237_61864634_61875242_61875367_61884236_61884409_61899582_61899655_61901281_61901460_61908371_61908483_61914586_61914665_61927729_61927830_61990167_61990365_62017855_62017948_62037976_62038050_62050965_62051059_62079449_62079568_62084514_62084649_62108436_62108521_62114052_62114247_62116531_62116680_62117131_62117219_62121185_62121296_62123020_62123059_62127971_62128095_62128840_62128946_62148283_62148391_62153357_62153482_62160907_62161390_62162882
transcript_98675.known	chr19	+	1158	5	FSM	ENSG00000105246.6	ENST00000221847.6	1158	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.78535710713571	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCAGGTGTGATGTTGC	4229436	True	NA	5	True	AATAAA	-1	NA	4229522	4237528	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_4229618_4231190_4231324_4233128_4233308_4234666_4234825_4236935
transcript_98678.known	chr19	+	1431	8	FSM	ENSG00000105248.16	ENST00000262962.12	1431	8	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	24.3595516194786	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCCTGGGCCCCTTCTCTC	4245002	True	NA	14	True	AATAAA	-15	NA	4247079	4269088	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_4247171_4249227_4249329_4251026_4251172_4254354_4254490_4258241_4258424_4261993_4262115_4267623_4267775_4268583
transcript_98680.known	chr19	+	1910	6	FSM	ENSG00000105251.11	ENST00000543264.7	1910	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	4.12795348811006	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTAGTGTCCTTTCTGG	4279219	True	NA	2	True	AATAAA	-13	NA	4279265	4290722	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_4280361_4282869_4282976_4283053_4283243_4284780_4284905_4288242_4288363_4290446
transcript_98682.known	chr19	-	1212	5	FSM	ENSG00000167664.8	ENST00000595645.5	1212	5	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_3	1.4790199457749	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAAGCTGGTGTTTGTGGC	-4302324	True	NA	NA	False	AATAAA	-17	NA	4302393	4292231	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4292886_4294578_4294681_4294774_4294817_4297985_4298346_4302339
transcript_98686.known	chr19	+	1634	13	FSM	ENSG00000105255.11	ENST00000597590.5	1634	13	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_11	120.106521009015	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACCTCTTAATAAAGGTC	4300609	True	NA	-20	True	NA	NA	NA	4304675	4323806	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_4304762_4305945_4306042_4306197_4306330_4307881_4307984_4310272_4310296_4310474_4310597_4311841_4312052_4317181_4317281_4318345_4318506_4318871_4318952_4322985_4323147_4323347_4323437_4323532
transcript_98689.known	chr19	+	1833	13	FSM	ENSG00000105255.11	ENST00000221856.11	1833	13	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_6	31.770881147505	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCGAGGCCGCGGTGCTG	4300531	True	NA	10	True	AATAAA	-15	NA	4304597	4323836	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_4304762_4305945_4306042_4306197_4306330_4307881_4307984_4310272_4310296_4310474_4310597_4311841_4312052_4317181_4317281_4318345_4318506_4318871_4318952_4322985_4323238_4323347_4323437_4323532
transcript_98709.nic	chr19	+	3089	12	NIC	ENSG00000105255.11	novel	1833	13	NA	NA	-4	0	intron_retention	FALSE	canonical	3	443	junction_7	31.6496837162529	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCGCGGTGCTGGTTCTTT	4300527	True	NA	17	True	AATAAA	-22	NA	4304593	4323843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_4304762_4305945_4306042_4306197_4306330_4307881_4307984_4310272_4310296_4310474_4312052_4317181_4317281_4318345_4318506_4318871_4318952_4322985_4323238_4323347_4323437_4323532
transcript_98712.nic	chr19	+	3025	12	NIC	ENSG00000105255.11	novel	1833	13	NA	NA	22	0	intron_retention	FALSE	canonical	3	54	junction_7	126.296777603618	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCGCGGTGCTGGTTCTTT	4300553	True	NA	17	True	AATAAA	-22	NA	4304619	4323843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_4304762_4305945_4306042_4306197_4306330_4307881_4307984_4310272_4310296_4310474_4312052_4317181_4317281_4318383_4318506_4318871_4318952_4322985_4323238_4323347_4323437_4323532
transcript_98725.known	chr19	+	1570	7	FSM	ENSG00000105255.11	ENST00000598179.1	1570	7	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_2	38.5461483880758	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCGCGGTGCTGGTTCTTT	4307406	False	NA	17	True	AATAAA	-22	NA	4311472	4323843	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_4312052_4317181_4317281_4318345_4318506_4318871_4318952_4322985_4323238_4323347_4323437_4323532
transcript_98726.known	chr19	-	1376	13	FSM	ENSG00000178078.12	ENST00000594605.6	1376	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	26.7907270441762	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATGTGTCTGGCTTGGCT	-4338113	True	NA	-6	True	ATTAAA	-16	NA	4338827	4324042	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4324198_4324454_4324530_4325215_4325309_4325395_4325546_4326941_4327008_4327123_4327227_4327315_4327386_4328674_4328810_4329960_4330062_4332021_4332079_4333693_4333817_4333972_4334045_4338651
transcript_98727.known	chr19	-	1508	13	FSM	ENSG00000178078.12	ENST00000600324.5	1508	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	30.2016371888825	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATGTGTCTGGCTTGGCT	-4338107	True	NA	-6	True	ATTAAA	-16	NA	4338821	4324042	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4324198_4324454_4324668_4325215_4325309_4325395_4325546_4326941_4327008_4327123_4327227_4327315_4327386_4328674_4328810_4329960_4330062_4332021_4332079_4333693_4333817_4333972_4334045_4338651
transcript_98729.nic	chr19	-	1401	12	NIC	ENSG00000178078.12	novel	1376	13	NA	NA	-100	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	32.3618487759638	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATGTGTCTGGCTTGGCT	-4338912	False	NA	-6	True	ATTAAA	-16	NA	4338927	4324042	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_4324198_4325215_4325309_4325395_4325546_4326941_4327008_4327123_4327227_4327315_4327386_4328674_4328810_4329960_4330062_4332021_4332079_4333693_4333817_4333972_4334045_4338651
transcript_98730.nic	chr19	-	1284	12	NIC	ENSG00000178078.12	novel	1376	13	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	32.9760744723096	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCATGTGTCTGGCTTGGC	-4338157	True	NA	-7	True	ATTAAA	-15	NA	4338871	4324043	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_4324198_4324454_4324530_4325215_4325309_4325395_4325546_4326941_4327008_4327123_4327227_4327315_4327386_4329960_4330062_4332021_4332079_4333693_4333817_4333972_4334045_4338651
transcript_98738.known	chr19	+	1614	13	FSM	ENSG00000008382.16	ENST00000599840.6	1614	13	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	25.8009205262138	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCCACGCTGGTCTCCC	4341286	True	NA	7	True	AATAAA	-16	NA	4343561	4360078	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_4343601_4343707_4343995_4345744_4345982_4352896_4353030_4354044_4354130_4354323_4354421_4354948_4355022_4355096_4355174_4357252_4357422_4357514_4357586_4358082_4358173_4359162_4359256_4359915
transcript_98740.known	chr19	+	1475	11	FSM	ENSG00000008382.16	ENST00000359935.8	1475	11	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_6	43.3981566428806	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACGCTGGTCTCCCCAA	4341278	True	NA	10	True	AATAAA	-19	NA	4343553	4360081	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_4343601_4343707_4343995_4345744_4345982_4352896_4353030_4354044_4354130_4354323_4354421_4357252_4357422_4357514_4357586_4358082_4358173_4359162_4359256_4359915
transcript_98742.known	chr19	+	1445	12	FSM	ENSG00000008382.16	ENST00000597036.5	1445	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	37.0293606982217	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCGGATGGGCTCAGGTA	4341435	False	NA	-33	True	NA	NA	NA	4343710	4360038	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_4343995_4345744_4345982_4352896_4353030_4354044_4354130_4354323_4354421_4354948_4355022_4355096_4355174_4357339_4357422_4357514_4357586_4358082_4358173_4359162_4359256_4359915
transcript_98747.known	chr19	-	2194	10	FSM	ENSG00000141985.9	ENST00000598564.5	2194	10	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_6	223.683031912195	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCCTTGCCTCGTCTTGG	-4391662	True	NA	-7	True	ATTAAA	-14	NA	4400418	4360370	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4361797_4362328_4362386_4362611_4362737_4363369_4363474_4363719_4363879_4364087_4364121_4365572_4365626_4366500_4366574_4366925_4366995_4400323
transcript_98749.known	chr19	-	2516	10	FSM	ENSG00000141985.9	ENST00000269886.7	2516	10	0	0	0	0	multi-exon	FALSE	canonical	3	657	junction_6	45.1830296996506	2843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCTTGCCTCGTCTTGGT	-4391791	True	NA	-6	True	ATTAAA	-15	NA	4400547	4360369	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4361797_4362328_4362386_4362611_4362737_4363369_4363474_4363719_4363879_4364087_4364222_4365481_4365626_4366500_4366574_4366925_4366995_4400323
transcript_98759.known	chr19	-	1404	9	FSM	ENSG00000141985.9	ENST00000417295.6	1404	9	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_6	243.702655658489	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCTGGCCGAGGCGGGG	-4391769	True	NA	NA	False	NA	NA	NA	4400525	4361315	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4361797_4362328_4362386_4362611_4362737_4363369_4363474_4363719_4363879_4364087_4364222_4366500_4366574_4366925_4366995_4400323
transcript_98789.known	chr19	+	3366	15	FSM	ENSG00000167670.16	ENST00000301280.10	3366	15	0	0	0	0	multi-exon	FALSE	canonical	3	535	junction_4	79.1241919712425	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTCTGTCTGTCTTTTC	4395833	True	NA	27	True	TATAAA	-19	NA	4402639	4443397	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_4402815_4405911_4405963_4408902_4409760_4418019_4418077_4422565_4422796_4423334_4423396_4423805_4423875_4428663_4428891_4429437_4429607_4429707_4429789_4430548_4430642_4431951_4432208_4433069_4433540_4442244_4442342_4442924
transcript_98797.nic	chr19	+	3166	14	NIC	ENSG00000167670.16	novel	3366	15	NA	NA	-11	-154	combination_of_known_junctions	FALSE	canonical	3	90	junction_3	175.802403871792	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGCTGGCCTATTGGGGA	4395822	True	NA	33	True	AATAAA	-11	NA	4402628	4443243	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_4402815_4405911_4405963_4408902_4409760_4422565_4422796_4423334_4423396_4423805_4423875_4428663_4428891_4429437_4429607_4429707_4429789_4430548_4430642_4431951_4432208_4433069_4433540_4442244_4442342_4442924
transcript_98798.nic	chr19	+	3320	14	NIC	ENSG00000167670.16	novel	3366	15	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	90	junction_3	175.802403871792	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTCTGTCTGTCTTTTC	4395822	True	NA	27	True	TATAAA	-19	NA	4402628	4443397	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_4402815_4405911_4405963_4408902_4409760_4422565_4422796_4423334_4423396_4423805_4423875_4428663_4428891_4429437_4429607_4429707_4429789_4430548_4430642_4431951_4432208_4433069_4433540_4442244_4442342_4442924
transcript_98807.known	chr19	-	1915	11	FSM	ENSG00000167671.12	ENST00000301281.11	1915	11	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_10	10.9311481556148	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTGGTTCTCCGTTGA	-4457528	True	NA	NA	False	AATAAA	-18	NA	4457794	4445005	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4445624_4446048_4446198_4446282_4446414_4446499_4446720_4446835_4446921_4447549_4447626_4448317_4448416_4452363_4452493_4453457_4453523_4453929_4454094_4457614
transcript_98819.nic	chr19	+	1226	5	ISM	ENSG00000167670.16	ENST00000301280.10	3366	15	-43	20789	-43	-6255	5prime_fragment	FALSE	canonical	3	535	junction_4	74.8878327901135	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAGAAAAGGAGAAGCTG	4395790	True	NA	8	True	NA	NA	NA	4402596	4422608	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_4402815_4405911_4405963_4408902_4409760_4418019_4418077_4422565
transcript_98820.nic	chr19	+	1252	5	ISM	ENSG00000167670.16	ENST00000301280.10	3366	15	-14	20734	-14	-6200	5prime_fragment	FALSE	canonical	3	535	junction_4	74.8878327901135	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGGAGGAAGAGA	4395819	True	NA	63	True	NA	NA	NA	4402625	4422663	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_4402815_4405911_4405963_4408902_4409760_4418019_4418077_4422565
transcript_98821.nic	chr19	+	1422	5	ISM	ENSG00000167670.16	ENST00000301280.10	3366	15	-51	20601	-51	-6067	5prime_fragment	FALSE	canonical	3	535	junction_4	74.8878327901135	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTCCTTGGAGGCCAT	4395782	True	NA	6	True	NA	NA	NA	4402588	4422796	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_4402815_4405911_4405963_4408902_4409760_4418019_4418077_4422565
transcript_98824.nic	chr19	+	1175	4	ISM	ENSG00000167670.16	ENST00000301280.10	3366	15	-35	25321	-35	8773	5prime_fragment	FALSE	canonical	3	554	junction_3	66.0319787846936	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGACATTTTCCCTGAAA	4395798	True	NA	NA	False	NA	NA	NA	4402604	4418076	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_4402815_4405911_4405963_4408902_4409760_4418019
transcript_98825.nic	chr19	+	1161	4	NIC	ENSG00000167670.16	novel	3366	15	NA	NA	-35	-6255	combination_of_known_junctions	FALSE	canonical	3	90	junction_3	284.374166665446	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAGAAAAGGAGAAGCTG	4395798	True	NA	8	True	NA	NA	NA	4402604	4422608	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_4402815_4405911_4405963_4408902_4409760_4422565
transcript_98842.known	chr19	+	2255	16	FSM	ENSG00000167674.15	ENST00000621835.4	2255	16	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_15	88.6452104365111	1290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATCACTTTTATTGGCTT	4465926	True	NA	77	True	TATAAA	-20	NA	4472305	4502207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_4472423_4475274_4475352_4475444_4475584_4488675_4488877_4491565_4491683_4491763_4491836_4493702_4493863_4493981_4494058_4494165_4494476_4496301_4496406_4497957_4498032_4498305_4498377_4498813_4498916_4499490_4499705_4501190_4501318_4501913
transcript_98847.nic	chr19	+	2350	16	NIC	ENSG00000167674.15	novel	3100	15	NA	NA	-70	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	117.754811177954	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATCACTTTTATTGGCTT	4474790	False	NA	77	True	TATAAA	-20	NA	4474821	4502207	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_4475031_4475274_4475352_4475444_4475584_4488675_4488877_4491565_4491683_4491763_4491836_4493702_4493863_4493981_4494058_4494165_4494476_4496301_4496406_4497957_4498032_4498305_4498377_4498813_4498916_4499490_4499705_4501190_4501318_4501910
transcript_98850.nic	chr19	+	2923	15	ISM	ENSG00000167674.15	ENST00000616600.5	2267	16	-62	-1	-62	0	intron_retention	FALSE	canonical	3	368	junction_1	52.2705383908897	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCACTTTTATTGGCTTG	4465855	True	NA	78	True	TATAAA	-21	NA	4472234	4502208	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_4472423_4475274_4475352_4475444_4475584_4488675_4488877_4491565_4491683_4491763_4491836_4493702_4493863_4493981_4494058_4494165_4494476_4496301_4496406_4497957_4498032_4498305_4498377_4498813_4498916_4499490_4499705_4501190
transcript_9887.known	chr1	+	3831	4	FSM	ENSG00000240563.2	ENST00000498273.2	3831	4	0	0	0	0	multi-exon	FALSE	canonical	3	1727	junction_1	83.1504660239496	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTATACTGTTTGCTTA	62150889	True	NA	22	True	ATTAAA	-16	NA	62194848	62212328	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_62194922_62196434_62196529_62206518_62207637_62209782
transcript_98875.known	chr19	-	2470	8	FSM	ENSG00000214456.8	ENST00000381848.7	2470	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.27775312999988	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCACGTGTGTGTTCCAG	-4534846	True	NA	-5	True	AATAAA	-21	NA	4535224	4522530	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4524086_4524962_4525077_4525632_4525833_4529072_4529254_4529783_4529867_4531626_4531823_4534014_4534096_4535164
transcript_98878.known	chr19	-	2605	2	FSM	ENSG00000171236.10	ENST00000306390.7	2605	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCCTACATCTGTGGTC	-4540013	False	NA	NA	False	AATAAA	-17	NA	4540036	4536401	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4538952_4539981
transcript_98880.known	chr19	-	907	2	FSM	ENSG00000214456.8	ENST00000586133.1	907	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGGGTGCCTGTATTCCC	-4534846	True	NA	NA	False	AATACA	-19	NA	4535224	4533248	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4534096_4535164
transcript_98881.known	chr19	-	4021	17	FSM	ENSG00000167680.17	ENST00000676793.1	4021	17	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_8	77.0003804779561	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCCCCCATGACTCTGGC	-4580698	True	NA	-7	True	AATAAA	-17	NA	4581776	4542592	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4544530_4546215_4546275_4546391_4546470_4548026_4548174_4548262_4548446_4550122_4550273_4550798_4550931_4552421_4552640_4554387_4554477_4554975_4555096_4555473_4555565_4555987_4556090_4556950_4557014_4557162_4557224_4558025_4558150_4558336_4558490_4581462
transcript_98885.known	chr19	-	990	6	FSM	ENSG00000074842.8	ENST00000262947.8	990	6	0	0	0	0	multi-exon	TRUE	canonical	3	777	junction_5	54.4301387100933	1441	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCACAGCCTGGGCCCTCC	-4656128	True	NA	-47	True	AATAAA	-20	NA	4670342	4657544	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4658085_4659930_4660004_4660668_4660751_4664875_4664938_4668594_4668646_4670160
transcript_98894.known	chr19	+	3816	2	FSM	ENSG00000185361.9	ENST00000327473.9	3816	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGTGGCTCATGTCAGTT	4638983	True	NA	NA	False	AATAAA	-19	NA	4639515	4655568	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_4639630_4651866
transcript_98905.known	chr19	-	4273	22	FSM	ENSG00000142002.18	ENST00000262960.14	4273	22	0	0	0	0	multi-exon	TRUE	canonical	3	86	junction_4	24.7546692725565	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTGCCTGAGGTTCCTT	-4720628	True	NA	-4	True	ATTAAA	-21	NA	4723842	4675226	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4676657_4679834_4679947_4682695_4682839_4683476_4683630_4684662_4684810_4685625_4685772_4688756_4688893_4689569_4689723_4690877_4690958_4694660_4694824_4695377_4695556_4697550_4697652_4700215_4700278_4702026_4702156_4702602_4702717_4703885_4704055_4704130_4704305_4705857_4705971_4714080_4714338_4719850_4719942_4722498_4722552_4723673
transcript_98912.nic	chr19	-	2800	16	ISM	ENSG00000142002.18	ENST00000262960.14	4273	22	-4	12876	-4	189	5prime_fragment	FALSE	canonical	3	96	junction_3	20.5895334791464	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGGGCCAGGCGCGGT	-4720632	True	NA	-15	True	ATTAAA	-10	NA	4723846	4688102	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_4688893_4689569_4689723_4690877_4690958_4694660_4694824_4695377_4695556_4697550_4697652_4700215_4700278_4702026_4702156_4702602_4702717_4703885_4704055_4704130_4704305_4705857_4705971_4714080_4714338_4719850_4719942_4722498_4722552_4723673
transcript_98918.known	chr19	-	2025	13	FSM	ENSG00000142002.18	ENST00000597849.5	2025	13	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_2	14.4997605344211	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGACTGTCTGTGGTCGC	-4720536	True	NA	-5	True	AATAAA	-35	NA	4723750	4694316	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4694824_4695377_4695556_4697550_4697652_4700215_4700278_4702026_4702156_4702602_4702717_4703885_4704055_4704130_4704305_4705857_4705971_4714080_4714338_4719850_4719942_4722498_4722552_4723673
transcript_98919.known	chr19	-	1909	12	FSM	ENSG00000142002.18	ENST00000601764.5	1909	12	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	42.4378982350866	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGACTGTCTGTGGTCG	-4720599	True	NA	-6	True	AATAAA	-34	NA	4723813	4694317	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4694824_4697550_4697652_4700215_4700278_4702026_4702156_4702602_4702717_4703885_4704055_4704130_4704305_4705857_4705971_4714080_4714338_4719850_4719942_4722498_4722552_4723673
transcript_98920.known	chr19	-	2684	2	FSM	ENSG00000127666.11	ENST00000248244.6	2684	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGCAGCGCCATTGTCTTC	-4831636	True	NA	-24	True	AATAAA	-16	NA	4831712	4815931	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4818517_4831613
transcript_98924.known	chr19	-	2154	8	FSM	ENSG00000105355.9	ENST00000592528.5	2154	8	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_4	250.443524938605	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTTAATAAACTTCACCCA	-4860121	True	NA	-44	True	NA	NA	NA	4867653	4838368	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4839537_4844667_4844794_4847690_4847891_4852015_4852266_4859589_4859673_4859825_4860025_4861328_4861412_4867608
transcript_98926.known	chr19	-	1535	8	FSM	ENSG00000105355.9	ENST00000585479.5	1535	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	231.291317323819	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTAAGGCTCTCAAAACGG	-4860162	True	NA	NA	False	NA	NA	NA	4867694	4839061	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_4839534_4844667_4844794_4847690_4847891_4852015_4852302_4859589_4859673_4859825_4860025_4861328_4861412_4867608
transcript_98946.known	chr19	+	3898	17	FSM	ENSG00000276043.5	ENST00000650932.1	3898	17	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	69.0769215711731	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATTGTGTCTTCCTATT	4907064	True	NA	2	True	AATAAA	-18	NA	4909500	4962154	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_4909656_4910875_4911039_4929221_4929477_4930715_4930877_4932740_4932957_4941527_4941629_4941744_4941932_4944131_4944256_4944342_4944451_4945860_4945966_4947104_4947212_4950610_4950774_4950858_4950997_4954349_4954489_4954649_4954823_4956708_4956814_4960656
transcript_98949.known	chr19	+	2651	17	FSM	ENSG00000276043.5	ENST00000615884.4	2651	17	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	66.75222374573	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTATACATTTTCAGGA	4908122	True	NA	NA	False	AAAAAG	-36	NA	4910145	4960961	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_4910247_4910875_4911039_4929221_4929477_4930715_4930877_4932740_4932957_4941527_4941629_4941744_4941932_4944131_4944256_4944342_4944451_4945860_4945966_4947104_4947212_4950610_4950774_4950858_4950997_4954349_4954489_4954649_4954823_4956708_4956814_4960656
transcript_98955.nnic	chr19	+	3735	16	NIC	ENSG00000276043.5	novel	3898	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	97.0961493686656	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGATTGTGTCTTCCT	4907061	True	NA	-1	True	AATAAA	-15	NA	4909497	4962151	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_4909656_4929221_4929477_4930715_4930877_4932740_4932957_4941527_4941629_4941744_4941932_4944131_4944256_4944342_4944451_4945860_4945966_4947104_4947212_4950610_4950774_4950858_4950997_4954349_4954489_4954649_4954823_4956708_4956814_4960656
transcript_98958.known	chr19	+	3965	17	FSM	ENSG00000276043.5	ENST00000620565.4	3965	17	0	0	0	0	multi-exon	TRUE	canonical	3	151	junction_1	69.0769215711731	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACTTGATTGTGTCTTCC	NA	False	NA	-2	True	AATAAA	-14	NA	4909429	4962150	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_4909656_4910875_4911039_4929221_4929477_4930715_4930877_4932740_4932957_4941527_4941629_4941744_4941932_4944131_4944256_4944342_4944451_4945860_4945966_4947104_4947212_4950610_4950774_4950858_4950997_4954349_4954489_4954649_4954823_4956708_4956814_4960656
transcript_98966.known	chr19	+	5703	24	FSM	ENSG00000127663.15	ENST00000611640.4	5703	24	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_11	23.4274813180455	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCCGTTCCATGCCCCG	4965720	True	NA	10	True	ATTAAA	-18	NA	4969112	5153595	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_4969231_5016256_5016340_5032865_5033032_5039835_5040012_5041136_5041252_5047475_5047670_5071009_5071060_5077366_5077471_5082366_5082505_5110621_5110819_5119117_5119220_5119652_5119853_5131075_5131546_5131886_5132008_5133882_5134062_5135338_5135562_5137261_5137339_5137620_5137677_5137961_5138071_5143966_5144153_5144247_5144413_5144782_5144903_5150357_5150451_5151334
transcript_98976.known	chr19	+	5604	23	FSM	ENSG00000127663.15	ENST00000159111.9	5604	23	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_10	50.3411502148955	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGTTCCATGCCCCGGCA	4965720	True	NA	13	True	ATTAAA	-21	NA	4969112	5153598	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_4969231_5016256_5016340_5032865_5033032_5039835_5040012_5041136_5041252_5047475_5047670_5071009_5071060_5077366_5077471_5082366_5082505_5110621_5110819_5119652_5119853_5131075_5131546_5131886_5132008_5133882_5134062_5135338_5135562_5137261_5137339_5137620_5137677_5137961_5138071_5143966_5144153_5144247_5144413_5144782_5144903_5150357_5150451_5151334
transcript_99.known	SIRV2	+	424	1	FSM	SIRV2C	SIRV206	424	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	478	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGAACACACTTCCATCCAC	NA	False	NA	NA	False	NA	NA	NA	4033	4457	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_SIRV2_+_4000_4500
transcript_9901.nic	chr1	+	787	3	ISM	ENSG00000240563.2	ENST00000498273.2	3831	4	-155	5345	-155	-5345	5prime_fragment	FALSE	canonical	3	1727	junction_1	36	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGAAGGAGAAAACTCTAAA	62194678	False	NA	NA	False	AAAACA	-17	NA	62194693	62206983	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_62194922_62196434_62196529_62206518
transcript_99010.known	chr19	-	3733	3	FSM	ENSG00000223573.7	ENST00000448587.5	3733	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGAGTTTAAGCTTCCTA	NA	False	NA	NA	False	AATAAA	-22	NA	5568034	5558166	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5561400_5562081_5562212_5567664
transcript_99015.known	chr19	+	3042	21	FSM	ENSG00000160633.13	ENST00000292123.9	3042	21	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_18	229.232545682327	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGTGTCATTTCTTTA	5594540	True	NA	57	True	AATAAA	-26	NA	5623098	5668478	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_5623395_5626404_5626490_5641593_5641659_5641739_5641947_5645336_5645400_5648015_5648044_5648988_5649500_5649925_5649976_5650977_5651073_5653114_5653265_5653337_5653421_5654060_5654201_5654367_5654457_5657240_5657348_5661517_5661809_5664021_5664160_5664396_5664440_5667045_5667165_5667352_5667451_5667819_5667887_5668161
transcript_99016.known	chr19	+	3014	21	FSM	ENSG00000160633.13	ENST00000592224.5	3014	21	0	0	0	0	multi-exon	FALSE	canonical	3	874	junction_18	140.503167224088	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATACCCTTTATTTAAAGT	5594559	True	NA	45	True	AATAAA	-14	NA	5623117	5668466	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_5623395_5626404_5626490_5641593_5641659_5641739_5641947_5645336_5645400_5648015_5648044_5648988_5649500_5649925_5649976_5650977_5651073_5653114_5653265_5653337_5653421_5654060_5654201_5654367_5654457_5657240_5657348_5661520_5661809_5664021_5664160_5664396_5664440_5667045_5667165_5667346_5667451_5667819_5667887_5668161
transcript_99017.known	chr19	-	3167	21	FSM	ENSG00000130254.12	ENST00000252542.9	3167	21	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_14	43.774735864423	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGCGTGCGCGTGCACA	-5615503	True	NA	-17	True	AATAAA	-15	NA	5622776	5586998	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5587400_5587700_5587768_5587867_5587981_5590277_5590409_5591747_5591794_5592746_5592888_5593890_5594179_5595360_5595498_5598792_5598885_5600129_5600261_5604582_5604696_5604786_5604937_5609994_5610096_5610638_5610689_5611119_5611631_5612539_5612568_5613464_5613528_5616131_5616336_5616421_5616487_5621308_5621397_5622529
transcript_9902.nic	chr1	+	1063	3	ISM	ENSG00000240563.2	ENST00000498273.2	3831	4	-155	5069	-155	-5069	5prime_fragment	FALSE	canonical	3	1727	junction_1	36	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAGAGAGGAAAGAAAATTT	62194678	False	NA	95	True	AAGAAA	-1	NA	62194693	62207259	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_62194922_62196434_62196529_62206518
transcript_99025.nic	chr19	+	2706	20	NIC	ENSG00000160633.13	novel	3064	21	NA	NA	-112	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_6	289.578641259476	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTTATTTAAAGTGTCAT	5622910	False	NA	50	True	AATAAA	-19	NA	5622922	5668471	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_5623395_5626404_5626490_5641593_5641659_5641739_5641947_5645336_5645400_5648015_5648044_5649925_5649976_5650977_5651073_5653114_5653265_5653337_5653421_5654060_5654201_5654367_5654457_5657240_5657348_5661517_5661809_5664021_5664160_5664396_5664440_5667045_5667165_5667346_5667451_5667819_5667887_5668161
transcript_9903.nic	chr1	+	1391	3	ISM	ENSG00000240563.2	ENST00000498273.2	3831	4	-155	4741	-155	-4741	5prime_fragment	FALSE	canonical	3	1727	junction_1	36	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGAAATAAATCAAGGAG	62194678	False	NA	-8	True	NA	NA	NA	62194693	62207587	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_62194922_62196434_62196529_62206518
transcript_99060.known	chr19	+	995	9	FSM	ENSG00000160633.13	ENST00000586934.5	995	9	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_6	363.91342978104	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGATCTCCGTGGAGA	5594562	True	NA	NA	False	NA	NA	NA	5623120	5653242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_5623395_5626404_5626490_5641593_5641659_5641739_5641947_5645336_5645400_5648015_5648044_5649925_5649976_5650977_5651073_5653114
transcript_99073.known	chr19	-	3092	18	FSM	ENSG00000196365.12	ENST00000360614.8	3092	18	0	0	0	0	multi-exon	TRUE	canonical	3	709	junction_16	109.366214427178	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCGGCTTCCTCACCTGCT	-5709984	True	NA	-5	True	ATTAAA	-14	NA	5720146	5691833	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5692209_5693297_5693463_5693551_5693770_5694386_5694553_5694760_5694902_5696053_5696171_5696248_5696372_5696669_5696758_5699026_5699206_5700788_5700928_5705771_5705993_5707059_5707144_5707696_5707827_5708341_5708404_5711770_5712003_5713133_5713254_5714182_5714272_5719703
transcript_9908.known	chr1	+	3602	9	FSM	ENSG00000162607.13	ENST00000339950.5	3602	9	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_4	16.7760990698076	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGTGTGTATATATATA	62434629	True	NA	80	True	TATAAA	-26	NA	62437048	62451804	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_62437401_62439798_62440038_62441487_62441609_62442194_62442300_62443158_62443320_62444737_62445430_62447340_62447512_62448464_62448667_62450245
transcript_99080.known	chr19	-	2626	18	FSM	ENSG00000196365.12	ENST00000590729.5	2626	18	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_14	239.948956509721	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGGCAGTGGAGCCACC	-5719839	False	NA	NA	False	NA	NA	NA	5719849	5691954	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5692209_5693297_5693463_5693551_5693770_5694386_5694553_5694760_5694902_5696053_5696171_5696248_5696372_5696669_5696758_5699026_5699206_5700788_5700928_5705771_5705993_5707059_5707144_5707696_5707827_5708341_5708404_5711818_5712003_5713133_5713254_5714182_5714272_5719703
transcript_99096.known	chr19	+	1697	8	FSM	ENSG00000167733.14	ENST00000339423.7	1697	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	33.1508611024923	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTTGTTCAAATTCCT	NA	False	NA	17	True	AATAAA	-19	NA	5681026	5688522	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_5681272_5684818_5684906_5684988_5685120_5686415_5686528_5686899_5686992_5687281_5687376_5687502_5687669_5687752
transcript_99098.known	chr19	+	1575	7	FSM	ENSG00000167733.14	ENST00000579562.5	1575	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	26.3085326251558	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTTGTTCAAATTCCT	NA	False	NA	17	True	AATAAA	-19	NA	5681036	5688522	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_5681272_5684818_5684906_5684988_5685120_5686899_5686992_5687281_5687376_5687502_5687669_5687752
transcript_99106.known	chr19	+	709	6	FSM	ENSG00000167733.14	ENST00000584904.5	709	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	35.4310598204457	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCGGGAGCTGGACGTGCA	NA	False	NA	NA	False	NA	NA	NA	5681036	5687576	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_5681272_5684818_5684906_5684992_5685120_5686899_5686992_5687281_5687376_5687502
transcript_99108.known	chr19	+	735	6	FSM	ENSG00000167733.14	ENST00000582346.5	735	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	39.2662705129988	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGTGAACGTGGCCATCAC	NA	False	NA	NA	False	NA	NA	NA	5681016	5687597	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_5681272_5684818_5684906_5686415_5686528_5686899_5686992_5687281_5687376_5687502
transcript_99109.known	chr19	+	1457	6	FSM	ENSG00000167733.14	ENST00000301382.8	1457	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	21.4848784031933	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTTGTTCAAATTCCT	NA	False	NA	17	True	AATAAA	-19	NA	5681023	5688522	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_5681272_5684818_5684906_5686899_5686992_5687281_5687376_5687502_5687669_5687752
transcript_99110.known	chr19	+	1540	6	FSM	ENSG00000167733.14	ENST00000581893.5	1540	6	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_1	29.312113536898	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTTGTTCAAATTCCT	NA	False	NA	17	True	AATAAA	-19	NA	5681008	5688522	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_5681272_5684964_5685120_5686899_5686992_5687281_5687376_5687502_5687669_5687752
transcript_99114.known	chr19	+	695	5	FSM	ENSG00000167733.14	ENST00000579559.1	695	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	34.8451933557557	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCAACTGTCCCTGGAG	5680139	True	NA	NA	False	NA	NA	NA	5681158	5687987	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_5681272_5684818_5684906_5687281_5687376_5687502_5687669_5687752
transcript_99118.known	chr19	+	730	4	FSM	ENSG00000167733.14	ENST00000422535.6	730	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	17.326921891156	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCGGCGTGGTGTCAGG	NA	False	NA	NA	False	AATAAA	-23	NA	5681047	5685589	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_5681272_5684818_5684906_5684988_5685120_5685301
transcript_99121.known	chr19	+	449	5	FSM	ENSG00000130255.13	ENST00000579649.5	449	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7447.93073611725	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGCTCTCCTGCTGTC	NA	False	NA	42	True	AATAAA	-17	NA	5674946	5691667	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_5674973_5690332_5690390_5690505_5690601_5691318_5691454_5691531
transcript_99122.known	chr19	-	516	4	FSM	ENSG00000174917.9	ENST00000309324.9	516	4	0	0	0	0	multi-exon	FALSE	canonical	3	553	junction_3	37.4195433192633	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGACCCGTGTGCTGG	-5674234	True	NA	-7	True	AATAAA	-15	NA	5680516	5678421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5678649_5679344_5679397_5679585_5679764_5680457
transcript_99124.known	chr19	-	577	4	FSM	ENSG00000174917.9	ENST00000587589.1	577	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	279.43077059543	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAAAATTAGCCTGGTAT	-5674206	True	NA	NA	False	AATAAA	-2	NA	5680488	5678914	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5679231_5679344_5679397_5679585_5679764_5680457
transcript_99126.known	chr19	-	722	2	FSM	ENSG00000196365.12	ENST00000590511.1	722	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGATGCAGCTATCAGCT	-5710001	True	NA	NA	False	CATAAA	-33	NA	5720163	5717354	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5717617_5719703
transcript_99127.known	chr19	+	607	4	FSM	ENSG00000130255.13	ENST00000347512.8	607	4	0	0	0	0	multi-exon	FALSE	canonical	3	8804	junction_1	3077.55534294493	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGATTAAGCCGACTGAG	5498632	True	NA	44	True	ATTAAA	-17	NA	5690294	5691875	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_5690328_5690505_5690601_5691318_5691454_5691531
transcript_99128.known	chr19	+	556	3	FSM	ENSG00000130255.13	ENST00000394580.2	556	3	0	0	0	0	multi-exon	FALSE	canonical	3	14569	junction_2	662	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGCTCTCCTGCTGTC	5498653	True	NA	42	True	AATAAA	-17	NA	5690315	5691667	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_5690601_5691318_5691454_5691531
transcript_99129.known	chr19	-	655	4	FSM	ENSG00000174917.9	ENST00000587950.5	655	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	283.695063208525	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGACCCGTGTGCTGG	-5680202	False	6282	-7	True	AATAAA	-15	NA	5680252	5678421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5678649_5679344_5679397_5679585_5679764_5680054
transcript_99130.known	chr19	+	452	3	FSM	ENSG00000130255.13	ENST00000579446.1	452	3	0	0	0	0	multi-exon	FALSE	canonical	3	8804	junction_1	3544.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTTGACAGAAGCCCTG	5498643	True	NA	28	True	AATAAA	-3	NA	5690305	5691653	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_5690328_5690505_5690601_5691318
transcript_99131.known	chr19	-	2882	19	FSM	ENSG00000196365.12	ENST00000585374.5	2882	19	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_18	235.853506531512	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCGGCTTCCTCACCTGC	-5709984	True	NA	-6	True	ATTAAA	-13	NA	5720146	5691834	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5692209_5693297_5693463_5693551_5693770_5694386_5694553_5694760_5694902_5696053_5696171_5696248_5696372_5696669_5696758_5699026_5699206_5700788_5700928_5705771_5705993_5707059_5707144_5707696_5707827_5708341_5708404_5711770_5712003_5713133_5713254_5714182_5714272_5719703_5719834_5720042
transcript_9914.known	chr1	+	3507	9	FSM	ENSG00000162607.13	ENST00000371146.5	3507	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	77.792090696934	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGTGTGTGTATATATA	62436286	True	NA	78	True	TATAAA	-24	NA	62436303	62451802	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_62436563_62439798_62440038_62441487_62441609_62442194_62442300_62443158_62443320_62444737_62445430_62447340_62447512_62448464_62448667_62450245
transcript_99149.nnic	chr19	-	2144	13	NIC	ENSG00000141994.16	novel	2038	13	NA	NA	-40	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	51.5102470927441	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGCCTTTCTGTGACCC	NA	False	NA	-5	True	AATAAA	-17	NA	5791265	5785139	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_5785276_5785382_5785512_5785602_5785792_5786466_5786543_5786748_5786846_5787060_5787172_5787295_5787362_5787588_5787706_5788023_5788177_5788356_5788399_5789206_5789720_5790042_5790336_5791043
transcript_99154.known	chr19	-	1355	12	FSM	ENSG00000141994.16	ENST00000320699.12	1355	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	53.6154042253524	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGCCTTTCTGTGACCC	-5787545	True	NA	-5	True	AATAAA	-17	NA	5791206	5785139	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5785276_5785382_5785512_5785602_5785792_5786466_5786543_5786748_5786846_5787060_5787172_5787295_5787362_5787588_5787706_5788023_5788177_5788356_5788399_5790259_5790336_5791043
transcript_99157.known	chr19	-	2301	12	FSM	ENSG00000141994.16	ENST00000589085.5	2301	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	53.8000583734975	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGCCTTTCTGTGACCC	-5787549	True	NA	-5	True	AATAAA	-17	NA	5791210	5785139	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5785276_5785382_5785512_5785602_5785792_5786466_5786543_5786748_5787172_5787295_5787362_5787588_5787706_5788023_5788177_5788356_5788399_5789206_5789717_5790042_5790336_5791043
transcript_9916.nic	chr1	+	1598	6	ISM	ENSG00000162607.13	ENST00000339950.5	3602	9	-503	6950	242	1534	5prime_fragment	FALSE	canonical	3	216	junction_4	18.2756668824971	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGCAGAATTACCTACTA	62436525	False	NA	NA	False	AGTAAA	-4	NA	62436545	62444854	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_62437401_62439798_62440038_62441487_62441609_62442194_62442300_62443158_62443320_62444737
transcript_99169.known	chr19	-	2038	13	FSM	ENSG00000141994.16	ENST00000309061.12	2038	13	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_10	22.6562476053639	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGCCTTTCTGTGACCC	-5787502	True	NA	-5	True	AATAAA	-17	NA	5791163	5785139	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5785276_5785382_5785512_5785602_5785792_5786466_5786543_5786748_5786846_5787060_5787172_5787295_5787362_5787588_5787706_5788023_5788177_5788356_5788399_5789206_5789720_5790046_5790336_5791043
transcript_9917.nic	chr1	+	1597	6	ISM	ENSG00000162607.13	ENST00000339950.5	3602	9	-378	6826	367	1658	5prime_fragment	FALSE	canonical	3	216	junction_4	18.2756668824971	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAATGGGAAAAGAAAAAG	62435939	True	NA	22	True	TTTAAA	-16	NA	62436670	62444978	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_62437401_62439798_62440038_62441487_62441609_62442194_62442300_62443158_62443320_62444737
transcript_99171.known	chr19	-	657	5	FSM	ENSG00000174886.14	ENST00000593233.1	657	5	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_4	1251.08979993444	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCAGTGTCCGGAGGGC	-5871327	True	NA	-12	True	AATAAA	-16	NA	5903754	5894676	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5894855_5896452_5896576_5896904_5896998_5901334_5901455_5903611
transcript_99173.known	chr19	-	1786	5	FSM	ENSG00000174886.14	ENST00000650663.1	1786	5	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	1142.53369753369	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCCGGCCGAGCCCCACC	-5871356	True	NA	NA	False	NA	NA	NA	5903783	5894905	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5896184_5896452_5896576_5896904_5896998_5901334_5901455_5903611
transcript_99175.known	chr19	-	575	4	FSM	ENSG00000174886.14	ENST00000308961.5	575	4	0	0	0	0	multi-exon	FALSE	canonical	3	2497	junction_1	209.19103443716	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGTGTCCGGAGGGCTT	-5871363	True	NA	-10	True	AATAAA	-18	NA	5903790	5894674	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5894855_5896452_5896576_5896904_5896998_5903611
transcript_9918.nic	chr1	+	1648	6	ISM	ENSG00000162607.13	ENST00000339950.5	3602	9	-378	6775	367	1709	5prime_fragment	FALSE	canonical	3	216	junction_4	18.2756668824971	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTAAATTATCCAAGGAACA	62435939	True	NA	-45	True	AAAAAG	-32	NA	62436670	62445029	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_62437401_62439798_62440038_62441487_62441609_62442194_62442300_62443158_62443320_62444737
transcript_99181.known	chr19	-	2154	3	FSM	ENSG00000174886.14	ENST00000592634.5	2154	3	0	0	0	0	multi-exon	FALSE	canonical	3	2709	junction_1	149	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGTGTCCGGAGGGCTT	-5871344	True	NA	-10	True	AATAAA	-18	NA	5903771	5894674	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5896576_5896904_5896998_5903611
transcript_9919.nic	chr1	+	1839	6	ISM	ENSG00000162607.13	ENST00000339950.5	3602	9	-503	6709	242	1775	5prime_fragment	FALSE	canonical	3	216	junction_4	18.2756668824971	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTACAAGTGATACATTAGA	62436525	False	NA	21	True	AAAAAG	-5	NA	62436545	62445095	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_62437401_62439798_62440038_62441487_62441609_62442194_62442300_62443158_62443320_62444737
transcript_99193.known	chr19	-	3233	17	FSM	ENSG00000031823.14	ENST00000340578.10	3233	17	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_14	165.795384058182	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCCTCTGCATGCCCC	-5970686	True	NA	-44	True	ATTAAA	-14	NA	5978140	5916138	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5917654_5917793_5917981_5918495_5918639_5921200_5921322_5923193_5923304_5923811_5923915_5924826_5924906_5925633_5925738_5927967_5928088_5931403_5931532_5932451_5932545_5933413_5933480_5941620_5941708_5941798_5941836_5951392_5951597_5957917_5957974_5978060
transcript_99197.known	chr19	-	3186	17	FSM	ENSG00000031823.14	ENST00000439268.6	3186	17	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_14	168.984825039854	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCCTCTGCATGCCCC	-5970654	True	NA	-44	True	ATTAAA	-14	NA	5978108	5916138	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5917654_5917793_5917981_5918495_5918639_5921200_5921322_5923193_5923304_5923811_5923915_5924826_5924906_5925633_5925738_5927967_5928088_5931418_5931532_5932451_5932545_5933413_5933480_5941620_5941708_5941798_5941836_5951392_5951597_5957917_5957974_5978060
transcript_99210.known	chr19	-	1762	16	FSM	ENSG00000031823.14	ENST00000034275.12	1762	16	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_9	75.7928756546418	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCACATTAAGACTTGTC	-5970632	True	NA	-37	True	NA	NA	NA	5978086	5917351	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5917654_5917793_5917981_5918495_5918639_5921200_5921322_5923193_5923304_5923811_5923915_5924826_5924906_5925633_5925738_5927967_5928088_5931403_5931532_5932451_5932545_5933413_5933480_5941620_5941708_5941798_5941836_5957917_5957974_5978060
transcript_99214.known	chr19	-	1783	16	FSM	ENSG00000031823.14	ENST00000591092.5	1783	16	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_9	85.3759268698671	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGGACTGGAGACCTCG	-5970639	True	NA	-8	True	NA	NA	NA	5978093	5917322	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5917654_5917793_5917981_5918495_5918639_5921200_5921322_5923193_5923304_5923811_5923915_5924826_5924906_5925633_5925738_5927967_5928088_5931418_5931532_5932451_5932545_5933413_5933480_5941620_5941708_5941798_5941836_5957917_5957974_5978060
transcript_9922.nic	chr1	+	1103	5	ISM	ENSG00000162607.13	ENST00000339950.5	3602	9	-274	8634	-274	-150	5prime_fragment	FALSE	canonical	3	216	junction_4	18.8745860881769	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATTCTTTGGCAAGTTA	62436697	False	NA	NA	False	CATAAA	-44	NA	62436774	62443170	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_62437401_62439798_62440038_62441487_62441609_62442194_62442300_62443158
transcript_9923.nic	chr1	+	1344	4	ISM	ENSG00000162607.13	ENST00000339950.5	3602	9	-503	9481	242	743	5prime_fragment	FALSE	canonical	3	248	junction_1	7.84573486395988	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATGTAAAAAGCAAAAGTA	62436525	False	NA	NA	False	AATAAA	-11	NA	62436545	62442323	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_62437401_62439798_62440038_62441487_62441609_62442194
transcript_9924.nic	chr1	+	904	2	ISM	ENSG00000162607.13	ENST00000339950.5	3602	9	-421	11875	324	-1651	5prime_fragment	FALSE	canonical	3	248	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACTTTCCTTAAAGTTTT	62436606	False	NA	NA	False	AAGAAA	-3	NA	62436627	62439929	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_+_62437401_62439798
transcript_9925.known	chr1	-	6985	49	FSM	ENSG00000116641.18	ENST00000454575.6	6985	49	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_27	19.7515712279358	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAGAACTTTACTTAGTA	-62688234	False	NA	NA	False	AAAACA	-12	NA	62688275	62454829	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_62455457_62457537_62457706_62473981_62474089_62475207_62475352_62475706_62475944_62476066_62476157_62477699_62477835_62488933_62489066_62492703_62492848_62494274_62494468_62495580_62495682_62496338_62496498_62504629_62504783_62505681_62505817_62507961_62508059_62510576_62510674_62513470_62513607_62513715_62513899_62528150_62528306_62529276_62529447_62535492_62535633_62537890_62538062_62539544_62539659_62539751_62539893_62542607_62542704_62543655_62543746_62544946_62545040_62552731_62552902_62555824_62555990_62558988_62559221_62561616_62561704_62577261_62577364_62578827_62578967_62583183_62583255_62586506_62586625_62618705_62618869_62619899_62619994_62625258_62625402_62631239_62631406_62633497_62633579_62634772_62634923_62636536_62636604_62647690_62647777_62648105_62648319_62648414_62648545_62653724_62653794_62653983_62654160_62663024_62663131_62688226
transcript_9926.known	chr1	-	2678	16	FSM	ENSG00000116641.18	ENST00000404627.3	2678	16	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	27.89934288354	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTTGTGTTGATGGAATT	-62686212	True	NA	NA	False	AATAAA	-16	NA	62688368	62584104	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_62584879_62586506_62586625_62618705_62618869_62619899_62619994_62625258_62625402_62631239_62631406_62633497_62633579_62634772_62634923_62636536_62636604_62647690_62647777_62648105_62648319_62648414_62648545_62653724_62653794_62653983_62654160_62663024_62663131_62688226
transcript_99267.known	chr19	-	571	8	FSM	ENSG00000031823.14	ENST00000590953.5	571	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	181.34216164984	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGCAAGCCTTTGTATT	-5970643	True	NA	57	True	AAAAAG	-9	NA	5978097	5928015	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5928088_5931403_5931532_5932451_5932545_5933413_5933480_5941620_5941708_5941798_5941836_5957917_5957969_5978060
transcript_99269.known	chr19	-	461	7	FSM	ENSG00000031823.14	ENST00000587463.5	461	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	191.923957742528	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCAGACTGCACGGGGG	-5970686	True	NA	NA	False	NA	NA	NA	5978140	5931500	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5931532_5932451_5932545_5933413_5933480_5941620_5941708_5941798_5941836_5957906_5957974_5978060
transcript_9927.nic	chr1	-	1000	8	ISM	ENSG00000116641.18	ENST00000404627.3	2678	16	-12	52433	6	1773	5prime_fragment	FALSE	canonical	3	81	junction_1	17.7958949634746	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAAGATTATATAATTTGA	-62686224	True	NA	NA	False	AAGAAA	-3	NA	62688380	62636537	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_62636604_62647690_62647777_62648105_62648319_62648414_62648545_62653724_62653794_62653983_62654160_62663024_62663131_62688226
transcript_99270.known	chr19	+	2240	2	FSM	ENSG00000187650.4	ENST00000339485.4	2240	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGGCTGGAGTGCAATG	5904535	True	NA	NA	False	TTTAAA	-20	NA	5904871	5910853	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_5905082_5908823
transcript_99272.known	chr19	-	554	8	FSM	ENSG00000031823.14	ENST00000587159.5	554	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	177.690512879408	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGATCTCAGCTCACTAC	-5970659	True	NA	NA	False	NA	NA	NA	5978113	5928279	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_5928314_5931403_5931532_5932451_5932545_5933413_5933480_5941620_5941708_5941798_5941836_5957917_5957974_5978060
transcript_99277.known	chr19	+	2410	6	FSM	ENSG00000125656.11	ENST00000245816.11	2410	6	0	0	0	0	multi-exon	FALSE	canonical	3	563	junction_1	33.2962460346508	358	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGCGCGGTGGCTCACGCC	6353228	True	NA	NA	False	AATAAA	-19	NA	6361530	6370242	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_6361773_6361868_6361941_6362445_6362543_6364451_6364640_6366257_6366364_6368537
transcript_99281.known	chr19	+	970	4	FSM	ENSG00000125652.8	ENST00000245812.8	970	4	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_1	89.3582054927744	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCCCAGCACTGCAGCT	6366292	True	NA	3	True	AATAAA	-13	NA	6372793	6375250	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_6373025_6374202_6374377_6374464_6374590_6374810
transcript_99283.known	chr19	+	556	4	FSM	ENSG00000125652.8	ENST00000599849.1	556	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	294.378441239617	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGACATTGCAGTGGCTG	6373687	False	NA	15	True	AATAAA	-22	NA	6373703	6375031	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_6373740_6374202_6374377_6374464_6374590_6374810
transcript_99284.nnic	chr19	+	712	4	NNC	ENSG00000125652.8	novel	970	4	NA	NA	118	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	277.892465213115	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACTGGGACATTGCAGTG	6373715	False	NA	11	True	AATAAA	-18	NA	6373821	6375027	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_6374018_6374202_6374377_6374464_6374590_6374810
transcript_99286.known	chr19	-	3911	1	FSM	ENSG00000125650.5	ENST00000597721.1	3911	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGACTTTGACCATGTG	-6379024	False	NA	-1	True	AATAAA	-19	NA	6379058	6375147	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_6375100_6379100
transcript_9929.known	chr1	-	122	2	FSM	ENSG00000116641.18	ENST00000636635.1	122	2	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGCACCTTCGGTGTGCA	-62688241	False	NA	NA	False	AATGAA	-16	NA	62688282	62687590	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_62687657_62688226
transcript_99290.known	chr19	-	2432	13	FSM	ENSG00000125651.14	ENST00000394456.10	2432	13	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_10	33.6373634850031	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTCAGATTTCTTTGTTT	-6387515	True	NA	-36	True	AATAAA	-18	NA	6393164	6379571	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_6380486_6380572_6380691_6380903_6381043_6381121_6381196_6381358_6381479_6381553_6381616_6381696_6381851_6383310_6383496_6387388_6387560_6389443_6389638_6391901_6391975_6392856_6392904_6392983
transcript_99307.nic	chr19	-	528	2	ISM	ENSG00000125651.14	ENST00000598607.1	568	6	518	5351	-258	-5351	internal_fragment	FALSE	canonical	3	321	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCCCCAGCCCCATCTC	-6393404	False	NA	NA	False	NA	NA	NA	6393463	6392855	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_-_6392904_6392983
transcript_99313.nnic	chr19	-	2646	21	NNC	ENSG00000088247.19	novel	2993	20	NA	NA	-62	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	143.859054285783	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACTCTTGCTATTTCTTT	NA	False	NA	-11	True	AATAAA	-23	NA	6424873	6413640	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_6414121_6415140_6415302_6415379_6415458_6415533_6415735_6415807_6415897_6416297_6416408_6416489_6416651_6416737_6416883_6416986_6417088_6417738_6417842_6417980_6418080_6418482_6418582_6418701_6418877_6419202_6419261_6420072_6420145_6420421_6420472_6421277_6421318_6421649_6421689_6422339_6422437_6424452_6424546_6424678
transcript_99317.nnic	chr19	-	2476	21	NNC	ENSG00000088247.19	novel	2993	20	NA	NA	-62	154	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	143.859054285783	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACAAAGAGCAAAGCAGAAC	NA	False	NA	35	True	ATTAAA	-3	NA	6424873	6413810	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_6414121_6415140_6415302_6415379_6415458_6415533_6415735_6415807_6415897_6416297_6416408_6416489_6416651_6416737_6416883_6416986_6417088_6417738_6417842_6417980_6418080_6418482_6418582_6418701_6418877_6419202_6419261_6420072_6420145_6420421_6420472_6421277_6421318_6421649_6421689_6422339_6422437_6424452_6424546_6424678
transcript_99318.nnic	chr19	-	2339	21	NNC	ENSG00000088247.19	novel	2993	20	NA	NA	0	154	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	155.944950222827	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACAAAGAGCAAAGCAGAAC	-6412346	True	NA	35	True	ATTAAA	-3	NA	6424811	6413810	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_6414121_6415140_6415302_6415379_6415458_6415608_6415735_6415807_6415897_6416297_6416408_6416489_6416651_6416737_6416883_6416986_6417088_6417738_6417842_6417980_6418080_6418482_6418582_6418701_6418877_6419202_6419261_6420072_6420145_6420421_6420472_6421277_6421318_6421649_6421689_6422339_6422437_6424452_6424546_6424678
transcript_9932.known	chr1	+	2890	11	FSM	ENSG00000125703.15	ENST00000371120.7	2890	11	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	44.2809213996276	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTTCTTTAGTCTAAA	62782062	True	NA	3	True	AATAAA	-15	NA	62784134	62865513	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_62784226_62803718_62803863_62805171_62805256_62816574_62816809_62819004_62819336_62821138_62821210_62829039_62829177_62834037_62834117_62834775_62834853_62841427_62841548_62863991
transcript_99321.nnic	chr19	-	3904	20	NNC	ENSG00000088247.19	novel	2993	20	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	128.077063020754	40	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCGTCTGCGGGTGCTGT	-6412355	True	NA	28	True	AATAAA	-14	NA	6424820	6413349	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_6415302_6415379_6415458_6415533_6415735_6415807_6415897_6416297_6416408_6416489_6416651_6416737_6416883_6416986_6417088_6417738_6417842_6417980_6418080_6418482_6418582_6418701_6418877_6419202_6419261_6420072_6420145_6420421_6420472_6421277_6421318_6421649_6421689_6422339_6422437_6424452_6424546_6424678
transcript_99324.nnic	chr19	-	3666	20	NNC	ENSG00000088247.19	novel	2993	20	NA	NA	-62	0	intron_retention	FALSE	non_canonical	0	0	junction_19	128.077063020754	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACTCTTGCTATTTCTTT	NA	False	NA	-11	True	AATAAA	-23	NA	6424873	6413640	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_6415302_6415379_6415458_6415533_6415735_6415807_6415897_6416297_6416408_6416489_6416651_6416737_6416883_6416986_6417088_6417738_6417842_6417980_6418080_6418482_6418582_6418701_6418877_6419202_6419261_6420072_6420145_6420421_6420472_6421277_6421318_6421649_6421689_6422339_6422437_6424452_6424546_6424678
transcript_99326.nnic	chr19	-	3496	20	NNC	ENSG00000088247.19	novel	2993	20	NA	NA	-62	154	intron_retention	FALSE	non_canonical	0	0	junction_19	128.077063020754	50	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACAAAGAGCAAAGCAGAAC	NA	False	NA	35	True	ATTAAA	-3	NA	6424873	6413810	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_6415302_6415379_6415458_6415533_6415735_6415807_6415897_6416297_6416408_6416489_6416651_6416737_6416883_6416986_6417088_6417738_6417842_6417980_6418080_6418482_6418582_6418701_6418877_6419202_6419261_6420072_6420145_6420421_6420472_6421277_6421318_6421649_6421689_6422339_6422437_6424452_6424546_6424678
transcript_99331.known	chr19	-	2795	23	FSM	ENSG00000205744.10	ENST00000381480.7	2795	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	14.4619763632285	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACTAATTTTATATAAATA	NA	False	NA	-5	True	AATAAA	-18	NA	6481787	6467206	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_6468119_6468233_6468442_6468577_6468646_6468845_6468954_6469595_6469641_6470294_6470367_6471264_6471306_6471405_6471497_6472888_6472994_6475273_6475400_6475483_6475586_6475705_6475752_6475836_6475938_6476856_6476968_6477073_6477128_6477217_6477284_6477377_6477459_6478782_6478853_6478936_6479057_6479668_6479719_6479858_6479903_6479986_6480052_6481678
transcript_99357.known	chr19	-	3482	10	FSM	ENSG00000125648.15	ENST00000301454.9	3482	10	0	0	0	0	multi-exon	TRUE	canonical	3	317	junction_3	52.8877217424906	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGGTTTTTACTGAAA	-6456927	True	NA	-3	True	AATAAA	-16	NA	6459792	6440063	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_6442160_6444150_6444302_6452311_6452480_6453980_6454089_6454322_6454476_6454558_6454718_6456419_6456532_6457502_6457591_6458197_6458325_6459472
transcript_99368.nic	chr19	-	3356	9	NIC	ENSG00000125648.15	novel	3482	10	NA	NA	-42	0	intron_retention	FALSE	canonical	3	83	junction_2	114.379849623961	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGGTTTTTACTGAAA	-6456969	True	NA	-3	True	AATAAA	-16	NA	6459834	6440063	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_6442160_6444150_6444302_6453980_6454089_6454322_6454476_6454558_6454718_6456419_6456532_6457502_6457591_6458197_6458325_6459472
transcript_9937.known	chr1	+	2944	11	FSM	ENSG00000125703.15	ENST00000317868.9	2944	11	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	34.9422380508175	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCTTTAGTCTAAATAC	62782059	True	NA	6	True	AATAAA	-18	NA	62784131	62865516	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_62784274_62803718_62803863_62805171_62805256_62816574_62816809_62819004_62819336_62821138_62821210_62829039_62829177_62834037_62834117_62834775_62834853_62841427_62841548_62863991
transcript_99372.nic	chr19	-	3047	9	NIC	ENSG00000125648.15	novel	3482	10	NA	NA	-18	-285	intron_retention	FALSE	canonical	3	83	junction_2	114.379849623961	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACCAAATCCCCAAATTCA	-6456945	True	NA	NA	False	AAAACA	-15	NA	6459810	6440348	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_6442160_6444150_6444302_6453980_6454089_6454322_6454476_6454558_6454718_6456419_6456532_6457502_6457591_6458197_6458325_6459472
transcript_99378.known	chr19	+	733	5	FSM	ENSG00000130545.16	ENST00000356762.7	733	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_4	67.0312427156173	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTATTGGTGTGTTTGAG	6460343	True	NA	12	True	TATAAA	-24	NA	6464282	6467221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_6464351_6464607_6464784_6465544_6465619_6466465_6466610_6466950
transcript_99380.known	chr19	+	1086	4	FSM	ENSG00000130545.16	ENST00000600229.6	1086	4	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_3	19.7709101684492	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTATTGGTGTGTTTGAG	6460331	True	NA	12	True	TATAAA	-24	NA	6464270	6467221	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_6464351_6464607_6464784_6465544_6465619_6466465
transcript_99382.known	chr19	+	688	1	FSM	ENSG00000275234.1	ENST00000615487.1	688	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGGTTCAGTTCTGATT	6469437	False	NA	-16	True	AATAAA	-38	NA	6469464	6470152	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_6469500_6470200
transcript_99383.known	chr19	-	2277	4	FSM	ENSG00000104833.12	ENST00000264071.7	2277	4	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_3	2.49443825784929	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTGCCGAATCCCTCT	-6500557	True	NA	-12	True	AATAAA	-22	NA	6502309	6494318	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_6496222_6501286_6501398_6501514_6501624_6502155
transcript_99384.known	chr19	-	911	3	FSM	ENSG00000125726.11	ENST00000245903.4	911	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCTTCGTGGCGTGCA	-6591060	True	NA	NA	False	ATTAAA	-15	NA	6591150	6585838	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_6586406_6590102_6590137_6590840
transcript_99388.known	chr19	-	2009	18	FSM	ENSG00000125734.16	ENST00000430424.8	2009	18	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_17	42.4832961271485	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTACAATAATGACCAAT	-6737155	False	1825	-35	True	NA	NA	NA	6737260	6730085	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_6730385_6730986_6731112_6731198_6731283_6731472_6731523_6731890_6731935_6732024_6732156_6732262_6732381_6732475_6732550_6732986_6733063_6733167_6733302_6733569_6733675_6733844_6733914_6734004_6734055_6734182_6734308_6735621_6735705_6735907_6735959_6736591_6736712_6736989
transcript_99389.known	chr19	-	2057	18	FSM	ENSG00000125734.16	ENST00000264080.12	2034	18	-23	0	-23	0	multi-exon	FALSE	canonical	3	152	junction_17	36.6453120157758	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCTGCATGCAGGGCCCAA	-6737498	False	NA	NA	False	AATAAA	-15	NA	6737603	6729913	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_6730385_6730986_6731112_6731198_6731283_6731472_6731523_6731890_6731935_6732024_6732156_6732262_6732381_6732475_6732550_6732986_6733063_6733167_6733302_6733569_6733675_6733844_6733914_6734004_6734055_6734182_6734308_6735621_6735705_6735907_6735959_6736591_6736712_6737456
transcript_99394.known	chr19	-	595	4	FSM	ENSG00000125734.16	ENST00000595620.5	595	4	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_3	57.1333722286915	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGAGTGCTTCCGGTGTC	-6735724	True	NA	NA	False	AATGAA	-18	NA	6737549	6735373	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_6735705_6735907_6735959_6736591_6736712_6737456
transcript_99395.known	chr19	-	1834	18	FSM	ENSG00000125734.16	ENST00000597706.5	1834	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	74.8017911448483	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTCCAGCTATGTGTACA	-6735735	True	NA	-47	True	NA	NA	NA	6737560	6730097	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_6730385_6730986_6731112_6731198_6731283_6731472_6731523_6731890_6731935_6732024_6732156_6732262_6732381_6732471_6732550_6732986_6733063_6733167_6733302_6733569_6733675_6733844_6733914_6734004_6734055_6734182_6734308_6735621_6735705_6735907_6735959_6736591_6736712_6737456
transcript_99397.known	chr19	+	2022	15	FSM	ENSG00000125733.18	ENST00000600677.5	2022	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	216.00061413367	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTAGAGTCGGTGTCTT	6731309	True	NA	16	True	TATAAA	-1	NA	6739713	6751509	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_6739786_6741009_6741126_6741224_6741282_6742966_6743115_6743193_6743257_6743493_6743599_6743707_6743837_6744553_6744701_6744799_6744995_6746177_6746197_6746432_6746562_6749933_6750067_6750291_6750432_6750511_6750634_6751062
transcript_99404.known	chr19	+	1920	14	FSM	ENSG00000125733.18	ENST00000596758.5	1920	14	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_13	164.09864979306	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTTTATACAAAAATGGG	6731357	True	NA	11	True	NA	NA	NA	6739761	6751464	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_6739786_6741009_6741126_6741224_6741282_6742966_6743115_6743193_6743257_6743493_6743599_6743707_6743837_6744553_6744701_6744799_6744995_6746451_6746562_6749933_6750067_6750291_6750432_6750511_6750634_6751033
transcript_99405.known	chr19	+	2035	14	FSM	ENSG00000125733.18	ENST00000313285.12	2035	14	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_1	43.3077606229821	985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTATTAGAGGATTTAAATA	6731275	True	NA	33	True	TATAAA	-18	NA	6739679	6751526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_6739786_6741009_6741126_6741224_6741282_6742966_6743115_6743193_6743257_6743493_6743599_6743707_6743837_6744553_6744701_6744799_6744995_6746451_6746562_6749933_6750067_6750291_6750432_6750511_6750634_6751062
transcript_99408.known	chr19	+	2068	13	FSM	ENSG00000125733.18	ENST00000595305.5	2068	13	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_1	42.3073246876025	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTATTAGAGGATTTAAATA	6731322	True	NA	33	True	TATAAA	-18	NA	6739726	6751526	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_6739786_6741009_6741126_6741224_6741282_6742966_6743115_6743193_6743257_6743493_6743599_6743707_6743837_6744553_6744701_6744799_6744995_6746451_6746562_6749933_6750067_6750291_6750634_6751062
transcript_99417.nic	chr19	+	2147	13	NIC	ENSG00000125733.18	novel	2035	14	NA	NA	-39	0	intron_retention	FALSE	canonical	3	510	junction_1	39.583508771541	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATAAAGTTCCTAGAGT	6731236	True	NA	7	True	AAAAAG	-4	NA	6739640	6751500	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_6739786_6741009_6741282_6742966_6743115_6743193_6743257_6743493_6743599_6743707_6743837_6744553_6744701_6744799_6744995_6746451_6746562_6749933_6750067_6750291_6750432_6750511_6750634_6751062
transcript_99444.known	chr19	-	2281	10	FSM	ENSG00000125731.13	ENST00000245908.11	2281	10	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_6	29.0712194871343	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAGGCTGTGTACTTTCT	-6765338	True	NA	-1	True	AATAAA	-22	NA	6767435	6752159	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_6752754_6753455_6753642_6754051_6754164_6754250_6754426_6754615_6754732_6754830_6755316_6759593_6759671_6760637_6760988_6763679_6763817_6767386
transcript_99446.nnic	chr19	-	2187	10	NNC	ENSG00000125731.13	novel	2281	10	NA	NA	-243	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_4	43.8805899326742	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTTGAGGCTGTGTAC	NA	False	NA	-6	True	AATAAA	-17	NA	6767706	6752164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_6752754_6753455_6753642_6754051_6754164_6754250_6754449_6754615_6754732_6754830_6754933_6759593_6759671_6760637_6760988_6763679_6763817_6767386
transcript_99447.nnic	chr19	-	2375	10	NNC	ENSG00000125731.13	novel	2281	10	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_4	38.6228998789802	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTTGAGGCTGTGTAC	-6765414	True	NA	-6	True	AATAAA	-17	NA	6767511	6752164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_6752754_6753455_6753642_6754051_6754164_6754250_6754449_6754615_6754732_6754830_6755316_6759593_6759671_6760637_6760988_6763679_6763817_6767386
transcript_99453.nic	chr19	-	1998	9	NIC	ENSG00000125731.13	novel	2281	10	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_7	46.6058942087801	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTTGAGGCTGTGTAC	-6765410	True	NA	-6	True	AATAAA	-17	NA	6767507	6752164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_6752754_6753455_6753642_6754051_6754164_6754250_6754426_6754615_6754732_6754830_6755316_6759593_6759671_6763679_6763817_6767386
transcript_99456.nnic	chr19	-	1642	9	NNC	ENSG00000125731.13	novel	2281	10	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_7	55.7000897665345	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTTGAGGCTGTGTAC	-6765414	True	NA	-6	True	AATAAA	-17	NA	6767511	6752164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_6752754_6753455_6753642_6754051_6754164_6754250_6754449_6754615_6754732_6754830_6754933_6759593_6759671_6763679_6763817_6767386
transcript_9946.known	chr1	-	941	4	FSM	ENSG00000230798.6	ENST00000418244.6	1006	4	65	0	17	0	multi-exon	FALSE	canonical	0	0	junction_1	379.945025263159	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	-63319573	True	NA	-43	True	AATAAA	-24	NA	63322436	63320883	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_63321191_63321366_63321464_63321664_63322081_63322315
transcript_99460.nic	chr19	-	2572	9	NIC	ENSG00000125731.13	novel	2281	10	NA	NA	-78	0	intron_retention	FALSE	canonical	3	79	junction_5	24.8844203267828	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTTGAGGCTGTGTAC	-6765444	True	NA	-6	True	AATAAA	-17	NA	6767541	6752164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_6752754_6753455_6753642_6754051_6754164_6754250_6754732_6754830_6755316_6759593_6759671_6760637_6760988_6763679_6763817_6767386
transcript_99466.nic	chr19	-	2484	9	NIC	ENSG00000125731.13	novel	2281	10	NA	NA	-93	0	intron_retention	FALSE	canonical	3	79	junction_5	30.8197886916831	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTTGAGGCTGTGTAC	-6765459	True	NA	-6	True	AATAAA	-17	NA	6767556	6752164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_6752754_6753455_6753642_6754051_6754426_6754615_6754732_6754830_6755316_6759593_6759671_6760637_6760988_6763679_6763817_6767386
transcript_99471.known	chr19	-	1750	8	FSM	ENSG00000125731.13	ENST00000595681.5	1750	8	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_4	24.3746271557042	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGCGAGGAAGTCGCGGG	-6765338	True	NA	NA	False	NA	NA	NA	6767435	6753582	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_6753642_6754051_6754164_6754250_6754732_6754830_6755316_6759593_6759671_6760637_6760988_6763679_6763817_6767386
transcript_9948.nnic	chr1	-	495	3	FSM	ENSG00000230798.6	ENST00000686970.1	492	3	-9	6	-9	0	multi-exon	FALSE	canonical	0	0	junction_1	848	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	-63282771	True	NA	-43	True	AATAAA	-24	NA	63321674	63320883	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_63321191_63321366_63321464_63321583
transcript_99481.known	chr19	-	2013	8	FSM	ENSG00000125731.13	ENST00000437152.7	2013	8	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_6	49.5823372105965	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTTGAGGCTGTGTAC	-6765338	True	NA	-6	True	AATAAA	-17	NA	6767435	6752164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_6752754_6753455_6753642_6754051_6754426_6754615_6754732_6754830_6755316_6759593_6759671_6763679_6763817_6767386
transcript_99483.nic	chr19	-	2629	8	NIC	ENSG00000125731.13	novel	2281	10	NA	NA	-48	0	intron_retention	FALSE	canonical	3	79	junction_4	26.3733012800477	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTTGAGGCTGTGTAC	-6765414	True	NA	-6	True	AATAAA	-17	NA	6767511	6752164	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_6752754_6753455_6753642_6754051_6754732_6754830_6755316_6759593_6759671_6760637_6760988_6763679_6763817_6767386
transcript_9949.nic	chr1	-	1241	3	FSM	ENSG00000230798.6	ENST00000686286.1	1247	3	0	6	0	0	multi-exon	FALSE	canonical	0	0	junction_1	414	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	-63322486	False	422	-43	True	AATAAA	-24	NA	63322501	63320883	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_63321191_63321366_63321464_63321664
transcript_99506.known	chr19	+	2892	27	FSM	ENSG00000141968.8	ENST00000602142.6	2892	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.74269396295526	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAAGGACTGGTGTCGTTC	6772678	False	NA	6	True	AATAAA	-15	NA	6772707	6857361	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_6773012_6820701_6820819_6821621_6821681_6821790_6821860_6822220_6822330_6822418_6822515_6825052_6825122_6825302_6825407_6826611_6826712_6828075_6828172_6828418_6828488_6828621_6828709_6828814_6828901_6829785_6829919_6832090_6832201_6833183_6833286_6833527_6833626_6833710_6833734_6833907_6833954_6836431_6836569_6836984_6837051_6843134_6843167_6847997_6848115_6850669_6850758_6852964_6853080_6853946_6854099_6857053
transcript_9951.known	chr1	-	496	3	FSM	ENSG00000230798.6	ENST00000431294.6	678	3	176	6	176	0	multi-exon	FALSE	canonical	0	0	junction_1	31	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	-63323567	False	NA	-43	True	AATAAA	-24	NA	63323582	63320883	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_63321191_63321366_63321464_63323490
transcript_99511.known	chr19	-	8954	21	FSM	ENSG00000171105.14	ENST00000341500.9	8954	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	8.07774721070176	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTTGTTTTTGTGTGGTGT	-7292447	False	NA	-2	True	ATTAAA	-26	NA	7293931	7112254	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_7117411_7119448_7119584_7120619_7120750_7122613_7122774_7122878_7122990_7125282_7125528_7126583_7126652_7128851_7128955_7132157_7132318_7141676_7141817_7142815_7143091_7152725_7152928_7163031_7163200_7166153_7166405_7167967_7168095_7170536_7170752_7172289_7172435_7174582_7174732_7184315_7184638_7267344_7267897_7293791
transcript_99518.known	chr19	+	5368	20	FSM	ENSG00000104880.19	ENST00000594665.2	5368	20	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_1	19.4891830215544	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCGAGATGAGCGGTGACT	7388063	True	NA	1	True	AATAAA	-4	NA	7395167	7472467	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7395248_7440343_7440483_7441652_7441766_7441911_7442053_7444203_7444455_7447042_7447169_7451148_7451267_7453466_7453716_7456326_7456404_7458511_7458691_7459902_7459995_7462151_7462335_7463817_7463956_7464559_7464691_7466917_7466975_7467070_7467119_7467213_7467685_7468824_7469132_7469903_7470030_7470125
transcript_99523.nic	chr19	+	2900	17	ISM	ENSG00000104880.19	ENST00000594665.2	5368	20	-59	4535	-46	-4535	5prime_fragment	FALSE	canonical	3	152	junction_1	15.3541525327841	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTCCTGTAATCCCAGC	7388004	True	NA	NA	False	CATAAA	-26	NA	7395108	7467932	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_7395248_7440343_7440483_7441652_7441766_7441911_7442053_7444203_7444455_7447042_7447169_7451148_7451267_7453466_7453716_7456326_7456404_7458511_7458691_7459902_7459995_7462151_7462335_7463817_7463956_7464559_7464691_7466917_7466975_7467070_7467119_7467213
transcript_99525.nic	chr19	+	3234	17	ISM	ENSG00000104880.19	ENST00000594665.2	5368	20	-59	4201	-46	-4201	5prime_fragment	FALSE	canonical	3	152	junction_1	15.3541525327841	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGCTGGGTGCCATGGTG	7388004	True	NA	NA	False	NA	NA	NA	7395108	7468266	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_7395248_7440343_7440483_7441652_7441766_7441911_7442053_7444203_7444455_7447042_7447169_7451148_7451267_7453466_7453716_7456326_7456404_7458511_7458691_7459902_7459995_7462151_7462335_7463817_7463956_7464559_7464691_7466917_7466975_7467070_7467119_7467213
transcript_9953.known	chr1	-	491	3	FSM	ENSG00000230798.6	ENST00000427268.1	491	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	145	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	-63324426	False	NA	-43	True	AATAAA	-24	NA	63324441	63320883	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_63321191_63321366_63321464_63324354
transcript_99531.known	chr19	-	1078	5	FSM	ENSG00000104883.8	ENST00000221480.6	1078	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	12.8646803302686	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGCTCAGGGGTGAAGG	-7488721	True	NA	-5	True	ATTAAA	-16	NA	7489035	7476874	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_7477437_7478313_7478377_7482032_7482212_7485837_7486027_7488950
transcript_99533.known	chr19	+	1968	2	FSM	ENSG00000198816.7	ENST00000597229.2	1968	2	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_1	0	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGTCGTGGCTTGCC	7513652	True	NA	31	True	AGTAAA	-20	NA	7516102	7521025	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7516250_7519204
transcript_99534.known	chr19	-	806	5	FSM	ENSG00000104883.8	ENST00000593547.1	806	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	23.3291662945764	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAATTAAACATTGTGGT	-7488658	False	NA	-31	True	NA	NA	NA	7488972	7476900	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_7477254_7478313_7478377_7482032_7482212_7485837_7486027_7488950
transcript_99537.nic	chr19	+	4532	36	NIC	ENSG00000032444.17	novel	4617	35	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	1	45	junction_1	80.4838125440927	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTCCTGTCGTTTTCGG	NA	False	NA	22	True	AATAAA	-16	NA	7534156	7561764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_7534240_7534378_7534447_7534749_7534903_7535508_7535578_7535932_7536021_7536190_7536274_7536448_7536547_7539917_7540059_7540148_7540309_7540629_7540711_7540922_7541052_7541353_7541435_7541521_7541685_7541983_7542068_7542560_7542671_7542760_7542929_7543006_7543085_7549906_7550113_7550297_7550430_7550516_7550641_7550993_7551108_7551361_7551438_7553871_7554016_7554208_7554273_7554554_7554724_7554892_7555076_7555248_7555368_7555606_7555764_7556452_7556570_7556654_7556725_7557167_7557285_7558849_7559152_7560647_7560765_7561013_7561111_7561207_7561318_7561487
transcript_99539.nic	chr19	+	4529	36	NIC	ENSG00000032444.17	novel	4617	35	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	1	45	junction_1	78.0474476304809	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTCCTGTCGTTTTCGG	NA	False	NA	22	True	AATAAA	-16	NA	7534156	7561764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_7534240_7534378_7534447_7534749_7534903_7535508_7535578_7535932_7536021_7536190_7536274_7536448_7536547_7539917_7540059_7540148_7540309_7540629_7540711_7540922_7541052_7541353_7541435_7541521_7541685_7541983_7542068_7542560_7542671_7542760_7542929_7543006_7543085_7549906_7550113_7550297_7550430_7550516_7550641_7550993_7551108_7551361_7551438_7553874_7554016_7554208_7554273_7554554_7554724_7554892_7555076_7555248_7555368_7555606_7555764_7556452_7556570_7556654_7556725_7557167_7557285_7558849_7559152_7560647_7560765_7561013_7561111_7561207_7561318_7561487
transcript_99543.known	chr19	+	4617	35	FSM	ENSG00000032444.17	ENST00000221249.10	4617	35	0	0	0	0	multi-exon	TRUE	canonical	1	11	junction_1	77.5996735982862	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTCCTGTCGTTTTCGG	NA	False	NA	22	True	AATAAA	-16	NA	7534003	7561764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7534240_7534749_7534903_7535508_7535578_7535932_7536021_7536190_7536274_7536448_7536547_7539917_7540059_7540148_7540309_7540629_7540711_7540922_7541052_7541353_7541435_7541521_7541685_7541983_7542068_7542560_7542671_7542760_7542929_7543006_7543085_7549906_7550113_7550297_7550430_7550516_7550641_7550993_7551108_7551361_7551438_7553871_7554016_7554208_7554273_7554554_7554724_7554892_7555076_7555248_7555368_7555606_7555764_7556452_7556570_7556654_7556725_7557167_7557285_7558849_7559152_7560647_7560765_7561013_7561111_7561207_7561318_7561487
transcript_9955.known	chr1	+	2562	1	FSM	ENSG00000187140.6	ENST00000371116.4	2562	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTAGTGTTTTATTTAGTT	63320701	True	NA	7	True	AATAAA	-16	NA	63322566	63325128	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_63322600_63325100
transcript_99551.known	chr19	+	2084	14	FSM	ENSG00000090674.16	ENST00000264079.11	2084	14	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_11	20.3501886358528	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGGAGGAGCAGTCCTTGC	7521226	True	NA	24	True	AATAAA	-32	NA	7522623	7534009	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7522782_7524960_7525167_7526438_7526607_7526760_7526927_7527519_7527629_7527863_7527961_7528157_7528258_7528596_7528704_7528820_7528971_7529100_7529203_7529589_7529713_7530285_7530502_7533522_7533654_7533758
transcript_99553.nic	chr19	+	1960	14	NIC	ENSG00000090674.16	novel	2084	14	NA	NA	-44	0	combination_of_known_junctions	TRUE	canonical	3	21	junction_11	35.1556134886495	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCGTTTTCATTTTTAG	7522548	False	NA	5	True	AATAAA	-13	NA	7522579	7533990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_7522782_7524960_7525167_7526438_7526607_7526760_7526927_7527519_7527629_7527863_7527961_7528157_7528258_7528596_7528704_7528820_7528971_7529100_7529203_7529589_7529713_7530434_7530502_7533522_7533654_7533758
transcript_99556.known	chr19	+	2253	13	FSM	ENSG00000090674.16	ENST00000394321.9	2253	13	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_10	20.7498326633146	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCGTTTTCATTTTTAG	7521273	True	NA	5	True	AATAAA	-13	NA	7522670	7533990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7522782_7524960_7525167_7526438_7526607_7526760_7526927_7527519_7527961_7528157_7528258_7528596_7528704_7528820_7528971_7529100_7529203_7529589_7529713_7530285_7530502_7533522_7533654_7533758
transcript_99558.nic	chr19	+	2000	13	NIC	ENSG00000090674.16	novel	2253	13	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	40.6393350776751	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCGTTTTCATTTTTAG	7522548	False	NA	5	True	AATAAA	-13	NA	7522579	7533990	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_7522782_7524960_7525167_7526438_7526607_7526760_7526927_7527863_7527961_7528157_7528258_7528596_7528704_7528820_7528971_7529100_7529203_7529589_7529713_7530285_7530502_7533522_7533654_7533758
transcript_9956.known	chr1	-	470	2	FSM	ENSG00000230798.6	ENST00000686639.1	1414	2	939	5	106	0	multi-exon	FALSE	canonical	0	0	junction_1	0	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	-63321514	False	NA	-43	True	AATAAA	-24	NA	63321529	63320883	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_63321191_63321366
transcript_99569.nic	chr19	+	1111	4	ISM	ENSG00000090674.16	ENST00000601003.1	666	5	-107	599	-44	130	5prime_fragment	FALSE	canonical	3	144	junction_3	8.28653526310404	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTATGCTTAGTGTGAGT	7522548	False	NA	NA	False	NA	NA	NA	7522579	7527295	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr19_+_7522782_7524960_7525167_7526438_7526607_7526760
transcript_9957.known	chr1	-	547	3	FSM	ENSG00000230798.6	ENST00000690549.1	571	3	18	6	0	0	multi-exon	FALSE	canonical	0	0	junction_1	277	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	-63319595	True	NA	-43	True	AATAAA	-24	NA	63322458	63320883	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_63321191_63321366_63321464_63322315
transcript_99572.known	chr19	+	4372	32	FSM	ENSG00000032444.17	ENST00000600737.6	4372	32	0	0	0	0	multi-exon	FALSE	canonical	1	134	junction_27	59.8449262052165	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTCCTGTCGTTTTCGG	7534947	True	NA	22	True	AATAAA	-16	NA	7535716	7561764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7536021_7536190_7536274_7536448_7536547_7539917_7540059_7540148_7540309_7540629_7540711_7540922_7541052_7541353_7541435_7541521_7541685_7541983_7542068_7542560_7542671_7542760_7542929_7543006_7543085_7549906_7550113_7550297_7550430_7550516_7550641_7550993_7551108_7551361_7551438_7553874_7554016_7554208_7554273_7554554_7554724_7554892_7555076_7555248_7555368_7555606_7555764_7556452_7556570_7556654_7556725_7557167_7557285_7558849_7559152_7560647_7560765_7561013_7561111_7561207_7561318_7561487
transcript_99573.known	chr19	+	4457	35	FSM	ENSG00000032444.17	ENST00000450331.7	4457	35	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	86.2648011471366	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTCCTGTCGTTTTCGG	7533320	True	NA	22	True	AATAAA	-16	NA	7534749	7561764	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7534903_7535126_7535203_7535508_7535578_7535932_7536021_7536190_7536274_7536448_7536547_7539917_7540059_7540148_7540309_7540629_7540711_7540922_7541052_7541353_7541435_7541521_7541685_7541983_7542068_7542560_7542671_7542760_7542929_7543006_7543085_7549906_7550113_7550297_7550430_7550516_7550641_7550993_7551108_7551361_7551438_7553871_7554016_7554208_7554273_7554554_7554724_7554892_7555076_7555248_7555368_7555606_7555764_7556452_7556570_7556654_7556725_7557167_7557285_7558849_7559152_7560647_7560765_7561013_7561111_7561207_7561318_7561487
transcript_99575.known	chr19	+	4179	19	FSM	ENSG00000076826.10	ENST00000446248.4	4179	19	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_5	57.5739192068727	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAACCTTGTCCCCCCCT	7592451	True	NA	11	True	AATAAA	-16	NA	7595901	7618304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7596151_7605225_7605480_7606270_7606394_7606475_7606572_7606776_7606810_7607820_7607869_7608125_7608265_7610475_7610616_7610699_7610794_7610876_7610932_7611094_7611169_7611516_7611587_7611686_7613164_7615182_7615323_7615417_7615720_7616522_7616623_7617325_7617439_7617542_7617662_7617751
transcript_99579.known	chr19	+	4137	17	FSM	ENSG00000076826.10	ENST00000160298.9	4137	17	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_4	37.4035739435418	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAACCTTGTCCCCCCCT	7592412	True	NA	11	True	AATAAA	-16	NA	7595862	7618304	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7596151_7605225_7605480_7606270_7606394_7606475_7606572_7608125_7608265_7610475_7610616_7610699_7610794_7610876_7610932_7611094_7611169_7611516_7611587_7611686_7613164_7615182_7615323_7615417_7615720_7616522_7616623_7617325_7617439_7617542_7617662_7617751
transcript_9959.known	chr1	+	3325	15	FSM	ENSG00000088035.18	ENST00000263440.6	3325	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	76.1510314561578	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACCTGATTCAAGGTATC	63365091	True	NA	NA	False	AATAAA	-32	NA	63367626	63438553	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_63367688_63370770_63371060_63396512_63396598_63402253_63402344_63404452_63404542_63406316_63406400_63407061_63407127_63411145_63411332_63411925_63412062_63414060_63414147_63415872_63415958_63419369_63419441_63428732_63428802_63428927_63429127_63436822
transcript_99591.known	chr19	-	2647	19	FSM	ENSG00000076924.12	ENST00000358368.5	2647	19	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_6	28.854038808381	2157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTGAGCCTCCTTCCTG	-7623743	True	NA	-2	True	AATACA	-18	NA	7629545	7619524	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_7619648_7619746_7619857_7619945_7620076_7620274_7620447_7620546_7620670_7620845_7621037_7621134_7621298_7622330_7622445_7622529_7622662_7622761_7622894_7623169_7623290_7623730_7623883_7624300_7624446_7625879_7626045_7626135_7626271_7627242_7627441_7627727_7627852_7628149_7628299_7629476
transcript_9963.nnic	chr1	+	1837	14	NIC	ENSG00000088035.18	novel	2055	15	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	78.6744471798389	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTATATGGAGACCAAAG	NA	False	NA	-14	True	NA	NA	NA	63367557	63437182	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_+_63367688_63370770_63371060_63396512_63396598_63402253_63402344_63404452_63404542_63406316_63406400_63407061_63407127_63411925_63412062_63414060_63414147_63415872_63415958_63419369_63419441_63428732_63428802_63428927_63429127_63436822
transcript_99636.known	chr19	+	1914	19	FSM	ENSG00000076944.17	ENST00000441779.6	1914	19	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_4	94.2613912296186	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGTGCCTACCTCACCT	7631067	True	NA	20	True	AATAAA	-20	NA	7637112	7647872	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7637187_7638725_7638776_7639018_7639101_7639730_7639808_7640697_7640810_7640899_7641004_7641704_7641854_7642033_7642119_7642202_7642334_7642428_7642537_7642765_7642824_7642982_7643049_7643164_7643246_7644613_7644753_7645196_7645307_7646248_7646345_7647161_7647248_7647353_7647512_7647724
transcript_99643.known	chr19	+	1859	19	FSM	ENSG00000076944.17	ENST00000414284.6	1859	19	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	91.8466415039524	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGCCTACCTCACCTT	7631081	True	NA	21	True	AATAAA	-21	NA	7637126	7647873	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7637187_7638725_7638776_7639018_7639101_7639730_7639808_7640739_7640810_7640899_7641004_7641704_7641854_7642033_7642119_7642202_7642334_7642428_7642537_7642765_7642824_7642982_7643049_7643164_7643246_7644613_7644753_7645196_7645307_7646248_7646345_7647161_7647248_7647353_7647512_7647724
transcript_99663.known	chr19	+	375	5	FSM	ENSG00000229833.10	ENST00000598540.6	375	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	1543.73692302154	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTGTTTTATTCTTTT	7619720	True	NA	13	True	AATATA	-26	NA	7629838	7631624	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7629861_7630572_7630660_7630822_7630847_7631231_7631322_7631472
transcript_99667.known	chr19	+	663	4	FSM	ENSG00000229833.10	ENST00000594797.6	663	4	0	0	0	0	multi-exon	FALSE	canonical	3	2942	junction_1	189.519274891911	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGGCATTTGAGTGTGAG	7619674	True	NA	NA	False	NA	NA	NA	7629792	7631956	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7629861_7630572_7630660_7630822_7630847_7631472
transcript_99669.known	chr19	+	219	3	FSM	ENSG00000229833.10	ENST00000456958.7	219	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	1671	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTTAAGTGTTTTATTC	7619695	True	NA	9	True	AATATA	-22	NA	7629813	7631620	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7629861_7630822_7630847_7631472
transcript_9967.known	chr1	-	1285	10	FSM	ENSG00000142856.17	ENST00000489099.5	1285	10	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_3	183.361883298884	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTTTGGTAGAACTCTG	NA	False	NA	-13	True	AATAAA	-16	NA	63523502	63440772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_63441104_63446805_63446857_63447564_63447615_63453917_63453975_63454379_63454474_63454889_63454969_63478763_63478834_63490082_63490219_63508527_63508571_63523128
transcript_99672.known	chr19	+	5508	2	FSM	ENSG00000181029.9	ENST00000596148.3	5508	2	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_1	0	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGTTGCTCCTCAATTT	7667622	True	NA	8	True	AATAAA	-20	NA	7680832	7687703	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7680879_7682241
transcript_99673.known	chr19	+	765	2	FSM	ENSG00000181029.9	ENST00000426877.2	765	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGTCTTGTGTCTTGTG	7667668	True	NA	30	True	GATAAA	-23	NA	7680878	7682858	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7681027_7682241
transcript_99674.known	chr19	+	790	2	FSM	ENSG00000181029.9	ENST00000317378.5	790	2	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	0	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGTGTGTCTTGTGTCTTG	7667664	True	NA	28	True	GATAAA	-21	NA	7680874	7682856	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7681050_7682241
transcript_99679.nic	chr19	+	3944	20	FSM	ENSG00000142459.9	ENST00000538904.7	3903	20	-41	0	-41	0	multi-exon	FALSE	canonical	3	22	junction_11	14.0047479087958	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGGCCTGCGGGCTGG	7829653	True	NA	22	True	AATAAA	-18	NA	7830176	7864976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7830382_7846495_7846680_7847731_7847922_7848920_7849146_7849255_7849331_7849996_7850123_7851433_7851578_7851680_7851771_7853085_7853184_7853272_7853334_7856014_7856069_7857091_7857125_7858190_7858332_7860560_7860690_7861877_7862019_7862121_7862278_7862387_7862535_7862971_7863068_7863184_7863281_7863423
transcript_9968.known	chr1	-	1044	10	FSM	ENSG00000142856.17	ENST00000371092.7	1044	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	207.667528682594	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTTTGGTAGAACTCTG	-63518859	True	NA	-13	True	AATAAA	-16	NA	63523194	63440772	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_63441104_63446805_63446857_63453917_63453975_63454379_63454474_63454889_63454969_63478763_63478834_63490082_63490219_63508527_63508571_63510064_63510182_63523128
transcript_99682.known	chr19	+	3855	19	FSM	ENSG00000142459.9	ENST00000270530.8	3855	19	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_11	14.14006216481	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGGCCTGCGGGCTGG	7829709	True	NA	22	True	AATAAA	-18	NA	7830232	7864976	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7830382_7846495_7846680_7847731_7847922_7848920_7849146_7849255_7849331_7849996_7850123_7851433_7851578_7851680_7851771_7853085_7853184_7853272_7853334_7856014_7856069_7858190_7858332_7860560_7860690_7861877_7862019_7862121_7862278_7862387_7862535_7862971_7863068_7863184_7863281_7863423
transcript_99686.nic	chr19	+	1513	11	NIC	ENSG00000142459.9	novel	3855	19	NA	NA	-41	0	combination_of_known_junctions	TRUE	canonical	1	1	junction_10	13.0341858203725	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCGGACTCTAAATGCTCT	7829653	True	NA	NA	False	AATAAA	-14	NA	7830176	7853616	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_7830382_7846495_7846680_7847731_7847922_7848920_7849146_7849255_7849331_7849996_7850123_7851433_7851578_7851680_7851771_7853085_7853184_7853272_7853334_7853501
transcript_99688.nic	chr19	-	2381	7	NIC	ENSG00000183248.12	novel	4467	6	NA	NA	-301	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	43.2152236550449	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTCGCTGTCACAGAGA	-7874256	True	NA	-3	True	AATAAA	-22	NA	7874691	7868718	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_7869545_7869714_7869918_7872304_7872757_7872848_7872962_7873196_7873300_7873418_7873697_7874285
transcript_99693.known	chr19	+	3590	3	FSM	ENSG00000171017.11	ENST00000306708.11	3590	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	1	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTAGTTTTGATCTCTTA	7888294	True	NA	7	True	AATAAA	-18	NA	7888509	7902016	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7888601_7895598_7895742_7898660
transcript_99697.known	chr19	+	3396	12	FSM	ENSG00000076984.18	ENST00000397983.7	3396	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	47.154222092587	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCTTCCTTTTCTTCCAC	7898655	True	NA	-2	True	TTTAAA	-44	NA	7903884	7914459	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7904069_7905807_7905856_7909754_7909897_7910062_7910130_7910259_7910374_7910452_7910573_7910695_7910804_7910979_7911160_7911249_7911331_7911435_7911579_7912148_7912195_7912296
transcript_99699.known	chr19	+	3430	11	FSM	ENSG00000076984.18	ENST00000397981.7	3430	11	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_8	37.9711732765792	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGTCTGTGGTGTGTCAT	7898613	True	NA	17	True	AATAAA	-19	NA	7903842	7914478	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7904069_7909754_7909897_7910062_7910130_7910259_7910374_7910452_7910573_7910695_7910804_7910979_7911160_7911249_7911331_7911414_7911579_7912148_7912195_7912296
transcript_9970.known	chr1	-	961	9	FSM	ENSG00000142856.17	ENST00000271002.15	961	9	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_2	77.2551575948169	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGTAGAACTCTGTGT	-63518890	True	NA	-10	True	AATAAA	-19	NA	63523225	63440769	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_63441104_63446805_63446857_63453917_63453975_63454379_63454474_63454889_63454969_63478763_63478834_63490082_63490219_63508527_63508571_63523128
transcript_99701.known	chr19	+	3375	11	FSM	ENSG00000076984.18	ENST00000397979.4	3375	11	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_7	9.48894093142117	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGTCTGTGGTGTGTCAT	7898647	True	NA	17	True	AATAAA	-19	NA	7903876	7914478	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7904069_7909754_7909897_7910062_7910130_7910259_7910374_7910452_7910573_7910695_7910804_7910979_7911160_7911249_7911331_7911435_7911579_7912148_7912195_7912296
transcript_99713.known	chr19	+	2575	6	FSM	ENSG00000260001.7	ENST00000565886.2	2575	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	15.0943698112906	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGGTGCAGTCAGTGAG	7914808	False	NA	10	True	AATAAA	-21	NA	7914829	7919097	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7916544_7916621_7916943_7917472_7917600_7917700_7917860_7918056_7918130_7918916
transcript_99715.known	chr19	+	1520	5	FSM	ENSG00000104976.12	ENST00000221573.11	1520	5	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	19.5751756058534	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGTGACTTAAAGATGGAA	7917911	True	NA	24	True	AATAAA	-24	NA	7920337	7923250	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7920550_7921422_7921543_7921704_7921774_7922034_7922348_7922444
transcript_99716.known	chr19	+	975	4	FSM	ENSG00000104976.12	ENST00000595637.1	975	4	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	22.464787260659	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCACAGCGAACTGAAATCG	7917960	True	NA	NA	False	NA	NA	NA	7920386	7922657	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_7920550_7921422_7921543_7921704_7921774_7922034
transcript_99723.known	chr19	-	1797	13	FSM	ENSG00000104980.8	ENST00000595831.5	1797	13	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_9	130.797128748642	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAATTGCAGAAGAGCAGC	-7938226	True	NA	-27	True	AATAAA	-4	NA	7943635	7926735	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_7927307_7927656_7927768_7928076_7928167_7931137_7931189_7932626_7932752_7932839_7932933_7933484_7933571_7933863_7934004_7934088_7934242_7935064_7935146_7938026_7938198_7941101_7941198_7943606
transcript_99740.known	chr19	-	556	3	FSM	ENSG00000104980.8	ENST00000600000.1	556	3	0	0	0	0	multi-exon	FALSE	canonical	3	473	junction_2	8.5	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCGCCCGCCTCAGCCTT	-7938257	True	NA	NA	False	NA	NA	NA	7943666	7937797	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_7938198_7941101_7941198_7943606
transcript_99741.known	chr19	-	1237	2	FSM	ENSG00000178531.6	ENST00000318978.6	1237	2	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_1	0	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAAGTAGCGTGCTGAGT	-7923215	True	NA	-36	True	AATAAA	-25	NA	7926135	7924490	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_7925559_7925966
transcript_99742.known	chr19	-	2227	1	FSM	ENSG00000104980.8	ENST00000599939.1	2227	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACGGAGTCTGAAGTGTC	-7928923	False	NA	-9	True	AATAAA	-22	NA	7928944	7926717	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_7926700_7928900
transcript_99748.nnic	chr19	-	2314	6	NNC	ENSG00000066044.15	novel	6054	6	NA	NA	-32	886	at_least_one_novel_splicesite	FALSE	canonical	3	439	junction_2	588.436912506345	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTGTTTTTTATTT	-7997508	True	NA	-1	True	ATTAAA	-22	NA	8005691	7962272	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_-_7963808_7967564_7967701_7973724_7973879_7981082_7981187_7991643_7991832_8005494
transcript_99749.known	chr19	-	6054	6	FSM	ENSG00000066044.15	ENST00000407627.7	6054	6	0	0	0	0	multi-exon	FALSE	canonical	3	1685	junction_1	124.802884582048	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGGTGTAGGGGTGAT	-7997458	True	NA	1	True	AATAAA	-20	NA	8005641	7958572	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_7963808_7967564_7967791_7973724_7973879_7981082_7981187_7991643_7991832_8005494
transcript_99751.known	chr19	-	856	6	FSM	ENSG00000066044.15	ENST00000593807.1	856	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	942.707080698984	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAACACCAACAAGTGCAA	-7997476	True	NA	NA	False	NA	NA	NA	8005659	7963629	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_7963808_7973558_7973626_7973724_7973879_7981082_7981187_7991643_7991832_8005494
transcript_9977.nic	chr1	-	930	8	NIC	ENSG00000142856.17	novel	945	6	NA	NA	4	-155	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	177.928901186825	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTTTAAATAATTTCTTT	-63518886	True	NA	NA	False	AATAAA	-21	NA	63523221	63449457	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr1_-_63449816_63453917_63453975_63454379_63454474_63454889_63454969_63478763_63478834_63490082_63490219_63508527_63508571_63523128
transcript_99788.nnic	chr19	+	1960	13	NIC	ENSG00000090661.12	novel	1826	13	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	2	32	junction_2	160.431947324161	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGCCTGAGAACTTGG	8204383	True	NA	11	True	ATTAAA	-16	NA	8209306	8262421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_8209495_8210705_8210863_8241340_8241458_8251075_8251250_8254498_8254617_8255606_8255726_8255821_8255880_8256235_8256287_8256617_8256711_8256948_8257078_8257878_8257986_8261687_8261845_8261929
transcript_99798.nnic	chr19	+	1993	13	NNC	ENSG00000090661.12	novel	1780	12	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	172.203589941931	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGCCTGAGAACTTGG	8204381	True	NA	11	True	ATTAAA	-16	NA	8209304	8262421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NNC_chr19_+_8209495_8210705_8210863_8250772_8250921_8251075_8251250_8254498_8254617_8255606_8255726_8255821_8255880_8256235_8256287_8256617_8256711_8256948_8257078_8257878_8257986_8261687_8261845_8261929
transcript_99816.nic	chr19	+	1853	12	NIC	ENSG00000090661.12	novel	1803	12	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_2	130.095324237383	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGCCTGAGAACTTGG	8204405	True	NA	11	True	ATTAAA	-16	NA	8209328	8262421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_8209495_8210705_8210863_8251043_8251250_8254498_8254617_8255606_8255726_8255821_8255880_8256235_8256287_8256617_8256711_8256948_8257078_8257878_8257986_8261687_8261845_8261929
transcript_99820.known	chr19	+	1780	12	FSM	ENSG00000090661.12	ENST00000251363.10	1780	12	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_2	92.4106000860532	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGCCTGAGAACTTGG	8204446	True	NA	11	True	ATTAAA	-16	NA	8209369	8262421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_8209495_8210705_8210863_8251075_8251250_8254498_8254617_8255606_8255726_8255821_8255880_8256235_8256287_8256617_8256711_8256948_8257078_8257878_8257986_8261687_8261845_8261929
transcript_99825.known	chr19	+	1803	12	FSM	ENSG00000090661.12	ENST00000558331.5	1803	12	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	134.628782550052	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGCCTGAGAACTTGG	8204389	True	NA	11	True	ATTAAA	-16	NA	8209312	8262421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_8209495_8210705_8210863_8251109_8251250_8254498_8254617_8255606_8255726_8255821_8255880_8256235_8256287_8256617_8256711_8256948_8257078_8257878_8257986_8261687_8261845_8261929
transcript_9983.nic	chr1	-	1870	7	ISM	ENSG00000142856.17	ENST00000460394.5	873	8	-43	899	0	-899	5prime_fragment	FALSE	canonical	3	451	junction_6	54.2015272437554	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAAGAAAAATT	-63518890	True	NA	NA	False	AAAAAG	-10	NA	63523225	63452623	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	ISM_chr1_-_63453975_63454379_63454474_63454889_63454969_63478763_63478834_63490082_63490219_63508527_63508571_63523128
transcript_99840.known	chr19	+	1637	11	FSM	ENSG00000090661.12	ENST00000559450.5	1637	11	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	111.734327760094	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGCCTGAGAACTTGG	8204432	True	NA	11	True	ATTAAA	-16	NA	8209355	8262421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_8209495_8251075_8251250_8254498_8254617_8255606_8255726_8255821_8255880_8256235_8256287_8256617_8256711_8256948_8257078_8257878_8257986_8261687_8261845_8261929
transcript_99852.nic	chr19	+	1669	11	NIC	ENSG00000090661.12	novel	1803	12	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	139.204202522769	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGCCTGAGAACTTGG	8204383	True	NA	11	True	ATTAAA	-16	NA	8209306	8262421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_8209495_8210705_8210863_8254498_8254617_8255606_8255726_8255821_8255880_8256235_8256287_8256617_8256711_8256948_8257078_8257878_8257986_8261687_8261845_8261929
transcript_99854.nnic	chr19	+	1726	11	NIC	ENSG00000090661.12	novel	1637	11	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	136.613359522413	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGCCTGAGAACTTGG	8204375	True	NA	11	True	ATTAAA	-16	NA	8209298	8262421	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_8209495_8251043_8251250_8254498_8254617_8255606_8255726_8255821_8255880_8256235_8256287_8256617_8256711_8256948_8257078_8257878_8257986_8261687_8261845_8261929
transcript_9986.known	chr1	-	657	5	FSM	ENSG00000142856.17	ENST00000462285.5	657	5	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	221.014705393103	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAGGAGCAACAATGCAT	-63518874	True	NA	NA	False	ATTAAA	-19	NA	63523209	63453614	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_63453975_63454379_63454474_63454889_63454969_63508527_63508571_63523128
transcript_99874.known	chr19	-	2787	11	FSM	ENSG00000186994.12	ENST00000330915.7	2787	11	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_10	11.4297856497836	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTTGTGTTTTGTTTGGGG	-8342911	True	NA	-2	True	AATAAA	-13	NA	8343262	8322583	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_8322923_8324448_8324548_8324629_8324831_8324950_8325097_8333013_8333231_8333723_8333809_8333909_8334117_8334319_8334420_8334499_8335793_8337794_8337857_8343224
transcript_99882.known	chr19	-	1253	5	FSM	ENSG00000167775.11	ENST00000301458.10	1253	5	0	0	0	0	multi-exon	FALSE	canonical	3	1671	junction_4	90.5189897203896	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGCCTCTGGGTCTCTG	-8297546	True	NA	-1	True	ATTAAA	-17	NA	8308358	8302126	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_8302606_8302776_8302981_8303854_8304089_8305030_8305157_8308148
transcript_99889.known	chr19	-	569	5	FSM	ENSG00000267855.6	ENST00000593729.5	569	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	911.94147290273	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGATCCCTGCCCTCCAG	-8309097	True	NA	-2	True	AATAAA	-13	NA	8321375	8308767	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_8308885_8311411_8311596_8316495_8316646_8320856_8320907_8321307
transcript_9989.known	chr1	-	873	8	FSM	ENSG00000142856.17	ENST00000460394.5	873	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	182.970723653501	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTGATTTTGAGCTATA	-63518847	True	NA	NA	False	ATTAAA	-15	NA	63523182	63451724	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_-_63452065_63453917_63453975_63454379_63454474_63454889_63454969_63478763_63478834_63490082_63490219_63508527_63508571_63523128
transcript_99892.known	chr19	+	1330	4	FSM	ENSG00000233927.5	ENST00000600659.3	1330	4	0	0	0	0	multi-exon	FALSE	canonical	3	9619	junction_1	577.440521227559	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTGCTGAAGTGTGGTT	8173550	True	NA	30	True	AATAAA	-30	NA	8321495	8323340	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_8321570_8321655_8321704_8321952_8322092_8322271
transcript_99896.known	chr19	-	1119	4	FSM	ENSG00000167775.11	ENST00000537716.6	1119	4	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_3	857.850155265411	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGCCTCTGGGTCTCTG	-8297538	True	NA	-1	True	ATTAAA	-17	NA	8308350	8302126	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_8302606_8302776_8302981_8303854_8304089_8308148
transcript_9990.known	chr1	+	2178	14	FSM	ENSG00000203965.13	ENST00000371088.5	2178	14	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_7	10.8954145938371	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGGTGTTCTTATTTA	63523099	True	NA	7	True	ATTAAA	-19	NA	63523524	63572693	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_63523635_63525571_63525760_63531819_63532032_63532669_63532757_63533453_63533650_63534094_63534217_63545915_63546058_63551724_63551835_63555357_63555516_63557113_63557248_63561708_63561858_63568309_63568520_63571020_63571129_63572441
transcript_99900.known	chr19	-	580	4	FSM	ENSG00000267855.6	ENST00000301457.3	580	4	0	0	0	0	multi-exon	FALSE	canonical	3	2005	junction_2	83.9616314488681	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGGCATGAGCCACCACAC	-8309097	True	NA	53	True	NA	NA	NA	8321375	8311283	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_8311596_8316495_8316646_8320856_8320907_8321307
transcript_99901.known	chr19	+	1523	3	FSM	ENSG00000233927.5	ENST00000449223.3	1523	3	0	0	0	0	multi-exon	FALSE	canonical	3	9619	junction_1	151.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCTGCAATCTCCTTGA	NA	False	NA	NA	False	NA	NA	NA	8321157	8322946	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_8321570_8321655_8322092_8322271
transcript_99902.nnic	chr19	-	914	3	NIC	ENSG00000167775.11	novel	1253	5	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	3	92	junction_2	908.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGCCTCTGGGTCTCTG	-8308369	False	NA	-1	True	ATTAAA	-17	NA	8308379	8302126	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_-_8302606_8302776_8302981_8308148
transcript_99904.known	chr19	+	334	3	FSM	ENSG00000233927.5	ENST00000417088.2	334	3	0	0	0	0	multi-exon	FALSE	canonical	3	9922	junction_2	522.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGGTTCTTGTCTGGGTT	8321622	False	NA	41	True	AATAAA	-21	NA	8321633	8322396	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_8321704_8321952_8322092_8322271
transcript_99905.known	chr19	-	2672	11	FSM	ENSG00000186994.12	ENST00000593649.5	2672	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	18.3455716727498	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTTATTAAAACAGGCTT	-8342911	True	NA	NA	False	AATAAA	-18	NA	8343262	8323314	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_8323539_8324448_8324548_8324629_8324831_8324950_8325097_8333013_8333231_8333723_8333809_8333909_8334117_8334319_8334420_8334499_8335793_8337794_8337857_8343224
transcript_99906.known	chr19	+	1872	7	FSM	ENSG00000167772.12	ENST00000301455.7	1872	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	3.25320354932386	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTTCTTTGTTCTTGTT	8364130	True	NA	7	True	AATAAA	-16	NA	8364154	8374370	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_8364640_8365953_8366065_8366201_8366320_8369218_8369333_8371055_8371152_8371240_8371523_8373704
transcript_99907.known	chr19	+	1705	6	FSM	ENSG00000167772.12	ENST00000393962.6	1705	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	4.89897948556636	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCACAGAGTTCTTGGAA	8364144	False	NA	-32	True	NA	NA	NA	8364168	8374331	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_8364640_8365953_8366065_8366201_8366320_8371055_8371152_8371240_8371523_8373704
transcript_99909.known	chr19	+	1590	5	FSM	ENSG00000185236.12	ENST00000328024.11	1590	5	0	0	0	0	multi-exon	FALSE	canonical	3	1192	junction_4	88.7760525141775	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCGCTGCGCCTCTGTC	8372683	True	NA	37	True	NA	NA	NA	8390359	8404434	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_8390457_8399862_8400059_8402085_8402280_8402484_8402566_8403412
transcript_99915.known	chr19	+	894	4	FSM	ENSG00000185236.12	ENST00000594216.1	894	4	0	0	0	0	multi-exon	FALSE	canonical	3	1359	junction_1	24.6576560118759	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGGGATTACAGGCGT	8372716	True	NA	NA	False	NA	NA	NA	8390392	8402924	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_8390457_8399862_8400059_8402085_8402280_8402484
transcript_99918.known	chr19	+	577	3	FSM	ENSG00000185236.12	ENST00000601897.1	577	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	694.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGGTGCCTGCCACCAC	8372712	True	NA	NA	False	NA	NA	NA	8390388	8402799	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_8390457_8402085_8402280_8402484
transcript_9992.known	chr1	+	2423	12	FSM	ENSG00000079739.17	ENST00000650546.1	2423	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	265.876874505276	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATATTTTGGGATAATAAA	63586256	True	NA	NA	False	NA	NA	NA	63593410	63660209	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_63593735_63629424_63629588_63629941_63630089_63631656_63631783_63634828_63635020_63636233_63636389_63638684_63638801_63648516_63648653_63651668_63651853_63654331_63654467_63654989_63655112_63659585
transcript_99920.known	chr19	-	1013	3	FSM	ENSG00000269386.6	ENST00000593581.6	1020	3	0	7	0	-6	multi-exon	FALSE	canonical	3	16	junction_2	10	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAAAGTGTTCTGAGGTT	-8389970	True	NA	NA	False	AAAAAG	-23	NA	8390685	8374378	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_-_8374609_8376961_8377068_8390008
transcript_99922.nic	chr19	+	1679	6	NIC	ENSG00000099785.11	novel	1667	5	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	62.7745171227943	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTTGTCAGTTATGTTT	NA	False	NA	22	True	AATAAA	-22	NA	8413276	8439017	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_8413421_8418536_8418808_8421788_8422017_8426608_8426805_8430657_8430868_8438387
transcript_99923.nic	chr19	+	1450	6	NIC	ENSG00000099785.11	novel	1380	5	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	73.303751609314	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTTGTCAGTTATGTTT	8412178	True	NA	22	True	AATAAA	-22	NA	8413300	8439017	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_8413421_8418741_8418808_8421788_8422017_8426608_8426805_8430657_8430868_8438387
transcript_99925.nic	chr19	+	2029	6	NIC	ENSG00000099785.11	novel	1667	5	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	72.9454590773134	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTTGTCAGTTATGTTT	8412178	True	NA	22	True	AATAAA	-22	NA	8413300	8439017	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_8413795_8418536_8418808_8421788_8422017_8426608_8426805_8430657_8430868_8438387
transcript_99928.known	chr19	+	1380	5	FSM	ENSG00000099785.11	ENST00000215555.7	1380	5	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	54.4357419348722	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTTGTCAGTTATGTTT	8412182	True	NA	22	True	AATAAA	-22	NA	8413304	8439017	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_8413421_8421788_8422017_8426608_8426805_8430657_8430868_8438387
transcript_99929.known	chr19	+	1192	4	FSM	ENSG00000099785.11	ENST00000381035.8	1192	4	0	0	0	0	multi-exon	TRUE	canonical	2	15	junction_3	90.0777441991084	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTGGACAAAATGGACTT	NA	False	NA	9	True	AATAAA	-9	NA	8413269	8439004	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_8413421_8421788_8422017_8426608_8426805_8438387
transcript_99934.known	chr19	+	2568	17	FSM	ENSG00000099783.12	ENST00000348943.7	2568	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1120.79870899897	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCCTGCTTGTGTGTGCTG	NA	False	NA	44	True	AATAAA	-17	NA	8444766	8489114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_8445112_8455404_8455575_8462528_8462582_8463496_8463505_8463592_8463687_8465323_8465363_8465479_8465516_8466234_8466389_8467534_8467585_8468773_8468835_8471325_8471428_8473663_8473709_8474166_8474245_8483157_8483212_8485602_8486406_8487023_8487076_8488690
transcript_99942.nic	chr19	+	2413	16	NIC	ENSG00000099783.12	novel	2568	17	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	1268.78703230027	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCCTGCTTGTGTGTGCTG	NA	False	NA	44	True	AATAAA	-17	NA	8444867	8489114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_8445112_8455404_8455575_8462528_8462582_8463496_8463505_8463592_8463687_8465323_8465363_8465479_8465516_8466234_8466389_8467534_8467585_8468773_8468835_8471325_8471428_8473663_8473709_8474166_8474245_8485602_8486406_8487023_8487076_8488690
transcript_99950.known	chr19	+	2477	16	FSM	ENSG00000099783.12	ENST00000325495.9	2477	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1132.26468048185	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCCTGCTTGTGTGTGCTG	8386062	True	NA	44	True	AATAAA	-17	NA	8444974	8489114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_8445112_8455404_8455575_8462528_8462582_8463496_8463505_8463592_8463687_8465323_8465516_8466234_8466389_8467534_8467585_8468773_8468835_8471325_8471428_8473663_8473709_8474166_8474245_8483157_8483212_8485602_8486406_8487023_8487076_8488690
transcript_9996.known	chr1	+	2337	11	FSM	ENSG00000079739.17	ENST00000371084.8	2337	11	0	0	0	0	multi-exon	FALSE	canonical	2	359	junction_3	114.307523811865	1300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTTGTCGTCTTTTTTTC	63586256	True	NA	NA	False	AATAAA	-17	NA	63593410	63660245	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr1_+_63593735_63629424_63629588_63629941_63630089_63631656_63631783_63634828_63635020_63636233_63636389_63638684_63638801_63648516_63648653_63651668_63651853_63654331_63654467_63659585
transcript_99961.nic	chr19	+	2530	15	NIC	ENSG00000099783.12	novel	2477	16	NA	NA	-52	0	intron_retention	FALSE	canonical	0	0	junction_3	1294.30056953001	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCCTGCTTGTGTGTGCTG	NA	False	NA	44	True	AATAAA	-17	NA	8444867	8489114	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	NIC_chr19_+_8445112_8455404_8455575_8462528_8462582_8463496_8463505_8463592_8463687_8465323_8465516_8466234_8466389_8467534_8467585_8468773_8468835_8471325_8471428_8473663_8473709_8474166_8474245_8485602_8486406_8487023_8487076_8488690
transcript_99964.known	chr19	+	2458	15	FSM	ENSG00000099783.12	ENST00000620401.4	2458	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	957.010929074139	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACGGCCTGCTTGTGTGT	8386077	True	NA	40	True	AATAAA	-13	NA	8444989	8489110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_8445112_8455404_8455575_8462528_8462590_8463592_8463687_8465323_8465516_8466234_8466389_8467534_8467585_8468773_8468835_8471325_8471428_8473663_8473709_8474166_8474245_8483157_8483212_8485602_8486406_8487023_8487076_8488690
transcript_99980.known	chr19	+	2373	14	FSM	ENSG00000099783.12	ENST00000600806.5	2373	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1398.55107185677	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACGGCCTGCTTGTGTGT	8386064	True	NA	40	True	AATAAA	-13	NA	8444976	8489110	WTC11_r2c2_ont	iso_detect_ref_spbu_long_r2c2_ont	FSM_chr19_+_8445112_8455404_8455575_8463496_8463505_8463592_8463687_8465323_8465516_8466234_8466389_8467534_8467585_8468773_8468835_8471325_8471428_8474166_8474245_8483157_8483212_8485602_8486406_8487023_8487076_8488690
